isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
ENSMUSG00000000001.5_108015154_108016822_1	chr3	-	1583	2	ISM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	36640	558	36640	-558	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGTTTGATCAGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	108016822	108015153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108016633_108016718
ENSMUSG00000000001.5_108015354_108019404_1	chr3	-	1643	3	ISM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	34058	758	34058	-758	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATAGTATTACCAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	108019404	108015353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108016633_108016718_108016929_108019250
ENSMUSG00000000001.5_108015456_108019835_1	chr3	-	1588	4	ISM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	33627	860	33627	-860	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTTTCTGGGGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	108019835	108015455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788
ENSMUSG00000000001.5_108015558_108023133_1	chr3	-	1624	5	ISM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	30329	962	30329	-962	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTTTCCACCTTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	108023133	108015557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078
ENSMUSG00000000001.5_108015630_108023169_1	chr3	-	1588	5	ISM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	30293	1034	30293	-1034	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTTACTGTAGCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	108023169	108015629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078
ENSMUSG00000000001.5_108015739_108025683_1	chr3	-	1584	6	ISM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	27779	1143	27779	-1143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTGTTTTCCATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	108025683	108015738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616
ENSMUSG00000000001.5_108015861_108025774_1	chr3	-	1553	6	ISM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	27688	1265	27688	-1265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCGTCAATGAGATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	108025774	108015860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616
ENSMUSG00000000001.5_108016020_108053322_1	chr3	-	1698	9	FSM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	140	1424	140	-1424	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTTGGAGAGTTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	108053322	108016019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
ENSMUSG00000000001.5_108016226_108053462_1	chr3	-	1632	9	FSM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	0	1630	0	-1630	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAACTATGCACACAATGT	NA	NA	NA	NA	NA	NA	NA	NA	108053462	108016225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
ENSMUSG00000000028.16_18603923_18613902_1	chr16	-	561	6	ISM	ENSMUSG00000000028.16	ENSMUST00000096990.10	1747	18	16474	4720	16474	-4720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCCCTGGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	18613902	18603922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844
ENSMUSG00000000028.16_18612040_18620586_1	chr16	-	550	7	ISM	ENSMUSG00000000028.16	ENSMUST00000096990.10	1747	18	9790	12837	9790	-12837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTCCTGGCCAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	18620586	18612039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550
ENSMUSG00000000028.16_18613584_18626092_1	chr16	-	560	8	ISM	ENSMUSG00000000028.16	ENSMUST00000096990.10	1747	18	4284	14381	4284	-14381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGTCCATGGACGTTT	NA	NA	NA	NA	NA	NA	NA	NA	18626092	18613583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029
ENSMUSG00000000028.16_18613937_18627510_1	chr16	-	551	8	ISM	ENSMUSG00000000028.16	ENSMUST00000000028.14	2143	20	3212	14740	2866	-14734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGTACAACACCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	18627510	18613936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481
ENSMUSG00000000028.16_18614575_18627619_1	chr16	-	620	7	ISM	ENSMUSG00000000028.16	ENSMUST00000000028.14	2143	20	3103	15378	2757	-15372	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTGCAGCTCACTAC	NA	NA	NA	NA	NA	NA	NA	NA	18627619	18614574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481
ENSMUSG00000000028.16_18616099_18629237_1	chr16	-	599	7	ISM	ENSMUSG00000000028.16	ENSMUST00000000028.14	2143	20	1485	16902	1139	-16896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGATGGCCTCCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	18629237	18616098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138
ENSMUSG00000000028.16_18617466_18630114_1	chr16	-	562	7	ISM	ENSMUSG00000000028.16	ENSMUST00000000028.14	2143	20	608	18269	262	-18263	internal_fragment	TRUE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCGTGGATGATGTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	18630114	18617465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054
ENSMUSG00000000028.16_18620551_18630341_1	chr16	-	617	7	ISM	ENSMUSG00000000028.16	ENSMUST00000000028.14	2143	20	381	21354	35	-21348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATGAACAGATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	18630341	18620550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
ENSMUSG00000000028.16_18626106_18630615_1	chr16	-	616	6	ISM	ENSMUSG00000000028.16	ENSMUST00000000028.14	2143	20	107	26909	107	-26903	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGAGGATGAAGATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	18630615	18626105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264_18630460_18630553
ENSMUSG00000000031.17_142129492_142129967_1	chr7	-	388	2	ISM	ENSMUSG00000000031.17	ENSMUST00000136359.8	2286	5	1913	226	1913	-226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAAACCTCTTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	142129967	142129491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_142129852_142129939
ENSMUSG00000000031.17_142129492_142130069_1	chr7	-	490	2	ISM	ENSMUSG00000000031.17	ENSMUST00000136359.8	2286	5	1811	226	1811	-226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAAACCTCTTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	142130069	142129491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_142129852_142129939
ENSMUSG00000000031.17_142129632_142130275_1	chr7	-	478	3	ISM	ENSMUSG00000000031.17	ENSMUST00000136359.8	2286	5	1605	366	1605	-366	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCTTGCTTGAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	142130275	142129631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_142129852_142129939_142130068_142130145
ENSMUSG00000000031.17_142129780_142130484_1	chr7	-	457	4	ISM	ENSMUSG00000000031.17	ENSMUST00000136359.8	2286	5	1396	514	1396	-514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCTTCATGGCCAACTC	NA	NA	NA	NA	NA	NA	NA	NA	142130484	142129779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_142129852_142129939_142130068_142130145_142130268_142130349
ENSMUSG00000000031.17_142129936_142130647_1	chr7	-	467	4	NNC	ENSMUSG00000000031.17	novel	2286	5	NA	NA	1233	-670	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGGCACCCTTTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	142130647	142129935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_142130068_142130145_142130268_142130349_142130481_142130565
ENSMUSG00000000031.17_142130244_142130884_1	chr7	-	478	3	ISM	ENSMUSG00000000031.17	ENSMUST00000136359.8	2286	5	996	978	996	-978	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGAAGCCGTCTGTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	142130884	142130243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_142130268_142130349_142130485_142130565
ENSMUSG00000000056.8_121128079_121141745_1	chr11	+	1068	9	NNC	ENSMUSG00000000056.8	novel	1318	10	NA	NA	0	-2003	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGTTCACAGGGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	121128078	121141745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_121128178_121129244_121129336_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141119_121141257_121141585
ENSMUSG00000000056.8_121128079_121143543_1	chr11	+	1104	10	FSM	ENSMUSG00000000056.8	ENST00000345415.11	1318	10	9	205	0	-205	multi-exon	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCCACACAGATCGTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	121128078	121143543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_121128178_121129244_121129336_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
ENSMUSG00000000056.8_121129245_121143658_1	chr11	+	1120	9	ISM	ENSMUSG00000000056.8	ENST00000345415.11	1318	10	1175	90	0	-90	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACTGAATCTCCCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	121129244	121143658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_121129336_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
ENSMUSG00000000056.8_121129245_121143752_1	chr11	+	1351	10	NNC	ENSMUSG00000000056.8	novel	1354	10	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGAAGGGCAGGAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	121129244	121143752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_121129336_121133333_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
ENSMUSG00000000056.8_121129245_121143752_2	chr11	+	1358	10	FSM	ENSMUSG00000000056.8	ENST00000390006.8	1354	10	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGAAGGGCAGGAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	121129244	121143752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_121129336_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
ENSMUSG00000000056.8_121129245_121143752_3	chr11	+	1352	10	NNC	ENSMUSG00000000056.8	novel	1354	10	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGAAGGGCAGGAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	121129244	121143752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_121129336_121133326_121133471_121135419_121135553_121135761_121135891_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
ENSMUSG00000000056.8_121137807_121144058_1	chr11	+	987	5	ISM	ENSMUSG00000000056.8	ENST00000390006.8	1354	10	8562	-310	8562	310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGATTATTGCTGCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	121137806	121144058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
ENSMUSG00000000056.8_121141682_121144455_1	chr11	+	1011	2	ISM	ENSMUSG00000000056.8	ENST00000390006.8	1354	10	12437	-707	12437	707	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGAGTCATTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	121141681	121144455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_121141744_121143506
ENSMUSG00000000058.7_17281326_17287288_1	chr6	+	765	3	FSM	ENSMUSG00000000058.7	ENSMUST00000000058.7	2733	3	142	1826	0	-149	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATACAATTGCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	17281325	17287288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_17281510_17281893_17282082_17286895
ENSMUSG00000000058.7_17281980_17287545_1	chr6	+	752	2	ISM	ENSMUSG00000000058.7	ENSMUST00000000058.7	2733	3	796	1569	622	108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTGAAAATGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	17281979	17287545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_17282082_17286895
ENSMUSG00000000058.7_17282033_17287598_1	chr6	+	752	2	ISM	ENSMUSG00000000058.7	ENSMUST00000000058.7	2733	3	849	1516	675	161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGATGTTTTGTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	17282032	17287598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_17282082_17286895
ENSMUSG00000000078.8_5911540_5917578_1	chr13	+	1227	3	FSM	ENSMUSG00000000078.8	ENST00000542957.1	4221	3	75	2919	59	-2815	multi-exon	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGTTGAGGATCTATT	NA	NA	NA	NA	NA	NA	NA	NA	5911539	5917578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_5911842_5914766_5915344_5917230
ENSMUSG00000000078.8_5911649_5917686_1	chr13	+	1226	3	FSM	ENSMUSG00000000078.8	ENST00000542957.1	4221	3	184	2811	168	-2707	multi-exon	FALSE	canonical	NA	NA	NA	NA	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTTTGTGTGTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	5911648	5917686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_5911842_5914766_5915344_5917230
ENSMUSG00000000078.8_5911742_5917774_1	chr13	+	1221	3	FSM	ENSMUSG00000000078.8	ENST00000542957.1	4221	3	277	2723	261	-2619	multi-exon	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAACAACAACAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5911741	5917774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_5911842_5914766_5915344_5917230
ENSMUSG00000000078.8_5915072_5918187_1	chr13	+	1229	2	ISM	ENSMUSG00000000078.8	ENST00000542957.1	4221	3	3607	2310	3591	-2206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAGGCCTGGCAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	5915071	5918187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_5915344_5917230
ENSMUSG00000000078.8_5915190_5917274_1	chr13	+	322	3	ISM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	3709	3119	3709	-3119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCTGAAGGAGCAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	5915189	5917274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_5915344_5916637_5916762_5917230
ENSMUSG00000000078.8_5915230_5917309_1	chr13	+	317	3	ISM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	3749	3084	3749	-3084	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGAGGCTTCCAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	5915229	5917309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_5915344_5916637_5916762_5917230
ENSMUSG00000000078.8_5915280_5917365_1	chr13	+	323	3	ISM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	3799	3028	3799	-3028	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCATGCCATTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	5915279	5917365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_5915344_5916637_5916762_5917230
ENSMUSG00000000078.8_5916730_5917500_1	chr13	+	302	2	ISM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	5249	2893	5249	-2893	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTTCCTAACCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	5916729	5917500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_5916762_5917230
ENSMUSG00000000085.17_120319277_120362555_1	chr4	+	790	6	ISM	ENSMUSG00000000085.17	ENSMUST00000106298.10	1995	13	0	23901	0	-23901	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGAGCATCAGCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	120319276	120362555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480
ENSMUSG00000000085.17_120320303_120374186_1	chr4	+	1270	8	ISM	ENSMUSG00000000085.17	ENST00000397171.6	2776	11	34	13190	34	-12270	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTTTGGCAACCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	120320302	120374186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082
ENSMUSG00000000085.17_120325523_120386417_1	chr4	+	1652	10	FSM	ENSMUSG00000000085.17	ENST00000361705.7	2705	10	94	959	94	-39	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTCACATTGACCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	120325522	120386417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120385352_120385496_120386330
ENSMUSG00000000085.17_120325538_120386463_1	chr4	+	1683	10	FSM	ENSMUSG00000000085.17	ENST00000361705.7	2705	10	109	913	109	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCTTCTCCCAGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	120325537	120386463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120385352_120385496_120386330
ENSMUSG00000000085.17_120325618_120386494_1	chr4	+	1634	10	FSM	ENSMUSG00000000085.17	ENST00000361705.7	2705	10	189	882	189	38	multi-exon	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGGCACCTTAGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	120325617	120386494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120385352_120385496_120386330
ENSMUSG00000000085.17_120340808_120386666_1	chr4	+	1647	8	ISM	ENSMUSG00000000085.17	ENST00000361705.7	2705	10	15379	710	15379	210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTATTTCTCAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	120340807	120386666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120385352_120385496_120386330
ENSMUSG00000000085.17_120362602_120386998_1	chr4	+	1635	7	ISM	ENSMUSG00000000085.17	ENST00000361705.7	2705	10	37173	378	37173	-361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGTGTGGCCTATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	120362601	120386998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120385352_120385496_120386330
ENSMUSG00000000085.17_120372273_120387359_1	chr4	+	1758	5	ISM	ENSMUSG00000000085.17	ENST00000361705.7	2705	10	46844	17	46844	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAAAACCAATACAA	NA	NA	NA	NA	NA	NA	NA	NA	120372272	120387359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_120372472_120374082_120374275_120379651_120379847_120385352_120385496_120386330
ENSMUSG00000000088.8_57428557_57439710_1	chr9	+	645	5	NNC	ENSMUSG00000000088.8	novel	645	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4979	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTCTTGTGATGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	57428556	57439710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_57428699_57436238_57436356_57437523_57437640_57438951_57439076_57439564
ENSMUSG00000000088.8_57428557_57439710_2	chr9	+	644	5	NNC	ENSMUSG00000000088.8	novel	645	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTCTTGTGATGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	57428556	57439710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_57428699_57436238_57436356_57437523_57437646_57438958_57439076_57439564
ENSMUSG00000000088.8_57436238_57439710_1	chr9	+	264	2	FSM	ENSMUSG00000000088.8	ENST00000562233.5	251	2	-13	0	-13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTCTTGTGATGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	57436237	57439710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_57436356_57439564
ENSMUSG00000000127.16_64185061_64228791_1	chr17	+	801	5	ISM	ENSMUSG00000000127.16	ENST00000281092.9	3187	19	71	217732	0	-116792	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATACATTTCCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	64185060	64228791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64185138_64203012_64203279_64214275_64214450_64218459_64218560_64228607
ENSMUSG00000000127.16_64203017_64230392_1	chr17	+	756	5	ISM	ENSMUSG00000000127.16	ENSMUST00000232945.2	2948	15	32007	115191	0	-115191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGTTACAGAGGAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	64203016	64230392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356
ENSMUSG00000000127.16_64203170_64231068_1	chr17	+	720	6	ISM	ENSMUSG00000000127.16	ENSMUST00000232945.2	2948	15	32160	114515	153	-114515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACAAGAAATCGAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	64203169	64231068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053
ENSMUSG00000000127.16_64203216_64231124_1	chr17	+	730	6	ISM	ENSMUSG00000000127.16	ENSMUST00000232945.2	2948	15	32206	114459	199	-114459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGAGATCATGTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	64203215	64231124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053
ENSMUSG00000000127.16_64214297_64241318_1	chr17	+	729	6	ISM	ENSMUSG00000000127.16	ENSMUST00000232945.2	2948	15	43287	104265	11280	-104265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGATGCTTTTACACAA	NA	NA	NA	NA	NA	NA	NA	NA	64214296	64241318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284
ENSMUSG00000000127.16_64214348_64241372_1	chr17	+	732	6	ISM	ENSMUSG00000000127.16	ENSMUST00000232945.2	2948	15	43338	104211	11331	-104211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAATCTTTTGAGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	64214347	64241372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284
ENSMUSG00000000127.16_64214421_64248311_1	chr17	+	720	7	ISM	ENSMUSG00000000127.16	ENSMUST00000232945.2	2948	15	43411	97272	11404	-97272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCACTTGAAGAGTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	64214420	64248311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285
ENSMUSG00000000127.16_64218491_64248375_1	chr17	+	724	6	ISM	ENSMUSG00000000127.16	ENSMUST00000232945.2	2948	15	47481	97208	15474	-97208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAAGCTTTGCTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	64218490	64248375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285
ENSMUSG00000000127.16_64228695_64280113_1	chr17	+	722	6	ISM	ENSMUSG00000000127.16	ENSMUST00000232945.2	2948	15	57685	65470	-16272	-65470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTAAGTCTCCAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	64228694	64280113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059
ENSMUSG00000000127.16_64228737_64288499_1	chr17	+	744	7	ISM	ENSMUSG00000000127.16	ENSMUST00000000129.14	2973	18	25720	157959	-16230	-57084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAGGCCCCTGGCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	64228736	64288499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474
ENSMUSG00000000127.16_64230395_64288578_1	chr17	+	730	6	ISM	ENSMUSG00000000127.16	ENSMUST00000000129.14	2973	18	27378	157880	-14572	-57005	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTTCCTGGTGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	64230394	64288578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474
ENSMUSG00000000127.16_64230450_64288642_1	chr17	+	739	6	ISM	ENSMUSG00000000127.16	ENSMUST00000000129.14	2973	18	27433	157816	-14517	-56941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGGACAAAGGAGGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	64230449	64288642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474
ENSMUSG00000000127.16_64231118_64298642_1	chr17	+	723	6	ISM	ENSMUSG00000000127.16	ENSMUST00000000129.14	2973	18	28101	147816	-13849	-46941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCACTTCAATACAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	64231117	64298642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588
ENSMUSG00000000127.16_64241362_64342469_1	chr17	+	744	7	ISM	ENSMUSG00000000127.16	ENSMUST00000000129.14	2973	18	38345	103989	-3605	-3114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAAAGGATAAAACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	64241361	64342469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441
ENSMUSG00000000127.16_64248286_64342557_1	chr17	+	786	6	ISM	ENSMUSG00000000127.16	ENSMUST00000000129.14	2973	18	45269	103901	3319	-3026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTCTTTGAAATTATA	NA	NA	NA	NA	NA	NA	NA	NA	64248285	64342557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441
ENSMUSG00000000127.16_64248415_64344636_1	chr17	+	729	7	ISM	ENSMUSG00000000127.16	ENSMUST00000000129.14	2973	18	45398	101822	3448	-947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATTATGGAACTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	64248414	64344636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564
ENSMUSG00000000127.16_64280055_64385970_1	chr17	+	817	7	ISM	ENSMUSG00000000127.16	ENSMUST00000038080.7	2068	14	35088	60222	35088	40387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAGCCCCTGTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	64280054	64385970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64280153_64288477_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846
ENSMUSG00000000127.16_64288482_64440466_1	chr17	+	746	7	ISM	ENSMUSG00000000127.16	ENSMUST00000038080.7	2068	14	43515	5726	43515	-5726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATAATACTCTGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	64288481	64440466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435
ENSMUSG00000000127.16_64288550_64440511_1	chr17	+	723	7	ISM	ENSMUSG00000000127.16	ENSMUST00000038080.7	2068	14	43583	5681	43583	-5681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACGGTGGAGTGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	64288549	64440511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435
ENSMUSG00000000127.16_64288592_64440578_1	chr17	+	748	7	ISM	ENSMUSG00000000127.16	ENSMUST00000038080.7	2068	14	43625	5614	43625	-5614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTAATTATGGTATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	64288591	64440578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435
ENSMUSG00000000127.16_64298589_64444827_1	chr17	+	793	7	ISM	ENSMUSG00000000127.16	ENSMUST00000038080.7	2068	14	53622	1365	53622	-1365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCAAGGCCTTAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	64298588	64444827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704
ENSMUSG00000000127.16_64298684_64445911_1	chr17	+	740	8	ISM	ENSMUSG00000000127.16	ENSMUST00000038080.7	2068	14	53717	281	53717	-281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAATCATGATGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	64298683	64445911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ENSMUSG00000000127.16_64336283_64446022_1	chr17	+	825	7	ISM	ENSMUSG00000000127.16	ENSMUST00000038080.7	2068	14	91316	170	91316	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGATGCCACCTGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	64336282	64446022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ENSMUSG00000000127.16_64344565_64446192_1	chr17	+	820	5	ISM	ENSMUSG00000000127.16	ENSMUST00000038080.7	2068	14	99598	0	99598	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTATTAGCTAACCACAG	NA	NA	NA	NA	NA	NA	NA	NA	64344564	64446192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ENSMUSG00000000127.16_64440433_64446351_1	chr17	+	763	3	ISM	ENSMUSG00000000127.16	ENSMUST00000038080.7	2068	14	195466	-159	195466	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCTGCCACAGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	64440432	64446351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64440591_64444704_64444828_64445869
ENSMUSG00000000127.16_64444704_64446523_1	chr17	+	778	2	ISM	ENSMUSG00000000127.16	ENSMUST00000038080.7	2068	14	199737	-331	199737	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCAGAACAAGCCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	64444703	64446523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_64444828_64445869
ENSMUSG00000000134.18_7629006_7634144_1	chrX	+	968	5	ISM	ENSMUSG00000000134.18	ENSMUST00000077680.10	3277	10	109	7297	72	-7292	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGATCATCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	7629005	7634144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131
ENSMUSG00000000148.18_140700537_140703881_1	chr5	+	842	6	ISM	ENSMUSG00000000148.18	ENSMUST00000100505.3	3431	14	9716	1253	9716	-1204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCCAGCCCAGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	140700536	140703881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ENSMUSG00000000148.18_140702724_140704248_1	chr5	+	827	3	ISM	ENSMUSG00000000148.18	ENSMUST00000100505.3	3431	14	11903	886	11903	-837	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAGAGCAGCGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	140702723	140704248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140702783_140702898_140703075_140703656
ENSMUSG00000000154.17_143027505_143052942_1	chr7	+	1364	11	FSM	ENSMUSG00000000154.17	ENSMUST00000052348.12	1525	11	32	129	32	-120	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGCTTGTCCTATTGG	NA	NA	NA	NA	NA	NA	NA	NA	143027504	143052942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_143027575_143029806_143030043_143033021_143033120_143033456_143033618_143034126_143034260_143044548_143044662_143045482_143045591_143046578_143046680_143050687_143050790_143051046_143051168_143052821
ENSMUSG00000000154.17_143029911_143053071_1	chr7	+	1319	10	ISM	ENSMUSG00000000154.17	ENSMUST00000105917.3	1552	11	1073	-9	1073	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGGGCTTTGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	143029910	143053071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_143030043_143033021_143033120_143033456_143033618_143034126_143034260_143044548_143044662_143045482_143045591_143046578_143046680_143050687_143050790_143051046_143051168_143052821
ENSMUSG00000000168.11_50546138_50549237_1	chr9	-	1871	3	ISM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	21843	205	21556	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTTCTTTGCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	50549237	50546137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220
ENSMUSG00000000168.11_50546196_50549294_1	chr9	-	1870	3	ISM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	21786	263	21499	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACAAGGGCACATCATT	NA	NA	NA	NA	NA	NA	NA	NA	50549294	50546195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220
ENSMUSG00000000168.11_50546266_50549342_1	chr9	-	1848	3	ISM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	21738	333	21451	-333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTCCCATGCAGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	50549342	50546265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220
ENSMUSG00000000168.11_50546525_50555760_1	chr9	-	1874	6	ISM	ENSMUSG00000000168.11	ENST00000393051.5	2268	12	15033	-573	15033	573	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGAAGCAGGCTGACATG	NA	NA	NA	NA	NA	NA	NA	NA	50555760	50546524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740
ENSMUSG00000000168.11_50546736_50560989_1	chr9	-	1862	8	ISM	ENSMUSG00000000168.11	ENST00000393051.5	2268	12	9804	-362	9804	362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAAAATAATACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	50560989	50546735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931
ENSMUSG00000000168.11_50546792_50561039_1	chr9	-	1856	8	ISM	ENSMUSG00000000168.11	ENST00000393051.5	2268	12	9754	-306	9754	306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGATAAAGCCGGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	50561039	50546791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931
ENSMUSG00000000168.11_50546871_50561073_1	chr9	-	1811	8	ISM	ENSMUSG00000000168.11	ENST00000393051.5	2268	12	9720	-227	9720	227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGATGTTTGTGGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	50561073	50546870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931
ENSMUSG00000000168.11_50547098_50556408_1	chr9	-	1336	6	ISM	ENSMUSG00000000168.11	ENST00000681339.1	2495	13	14405	0	14385	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGCATATTGAAGTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	50556408	50547097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555740_50555834_50556338
ENSMUSG00000000168.11_50547098_50565048_1	chr9	-	1899	10	ISM	ENSMUSG00000000168.11	ENST00000679878.1	2588	14	5783	0	5745	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGCATATTGAAGTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	50565048	50547097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921
ENSMUSG00000000168.11_50547098_50570792_1	chr9	-	2260	12	NNC	ENSMUSG00000000168.11	novel	2268	12	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGCATATTGAAGTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	50570792	50547097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555827_50556338_50556407_50560931_50561074_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ENSMUSG00000000168.11_50547098_50570792_2	chr9	-	2265	12	NNC	ENSMUSG00000000168.11	novel	2268	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGCATATTGAAGTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	50570792	50547097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50569144_50569299_50569464_50569590_50569987_50570090_50570492
ENSMUSG00000000168.11_50547098_50570792_3	chr9	-	2262	12	NNC	ENSMUSG00000000168.11	novel	2268	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGCATATTGAAGTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	50570792	50547097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555745_50555834_50556338_50556407_50560931_50561074_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ENSMUSG00000000168.11_50547098_50570792_4	chr9	-	2267	12	FSM	ENSMUSG00000000168.11	ENST00000393051.5	2268	12	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGCATATTGAAGTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	50570792	50547097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ENSMUSG00000000168.11_50547203_50560977_1	chr9	-	1275	7	ISM	ENSMUSG00000000168.11	ENST00000681339.1	2495	13	9836	105	9816	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATAAGCCCGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	50560977	50547202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555740_50555834_50556338_50556407_50560931
ENSMUSG00000000168.11_50547216_50569215_1	chr9	-	1852	11	ISM	ENSMUSG00000000168.11	ENST00000679878.1	2588	14	1616	118	1578	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCCTCAAGATAAAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	50569215	50547215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144
ENSMUSG00000000168.11_50547318_50569491_1	chr9	-	1860	12	ISM	ENSMUSG00000000168.11	ENST00000679878.1	2588	14	1340	220	1302	-220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTATCACTCAAGGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	50569491	50547317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464
ENSMUSG00000000168.11_50547358_50562105_1	chr9	-	1271	8	ISM	ENSMUSG00000000168.11	ENST00000681339.1	2495	13	8708	260	8688	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTAACCCTAGTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	50562105	50547357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555740_50555834_50556338_50556407_50560931_50561074_50562050
ENSMUSG00000000168.11_50547405_50562164_1	chr9	-	1283	8	ISM	ENSMUSG00000000168.11	ENST00000681339.1	2495	13	8649	307	8629	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAACTTATTTAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	50562164	50547404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555740_50555834_50556338_50556407_50560931_50561074_50562050
ENSMUSG00000000168.11_50547424_50570008_1	chr9	-	1873	13	ISM	ENSMUSG00000000168.11	ENST00000679878.1	2588	14	823	326	785	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTTTAGAATTTAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	50570008	50547423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987
ENSMUSG00000000168.11_50547483_50570052_1	chr9	-	1858	13	ISM	ENSMUSG00000000168.11	ENST00000679878.1	2588	14	779	385	741	-385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCTTCCTAGGGGCATA	NA	NA	NA	NA	NA	NA	NA	NA	50570052	50547482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987
ENSMUSG00000000168.11_50547523_50564950_1	chr9	-	1268	9	ISM	ENSMUSG00000000168.11	ENST00000681339.1	2495	13	5863	425	5843	-425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCTAGTGCAGGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	50564950	50547522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921
ENSMUSG00000000168.11_50547584_50565010_1	chr9	-	1267	9	ISM	ENSMUSG00000000168.11	ENST00000681339.1	2495	13	5803	486	5783	-486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCCAGTTACACCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	50565010	50547583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921
ENSMUSG00000000168.11_50547590_50570578_1	chr9	-	1843	14	FSM	ENSMUSG00000000168.11	ENST00000679878.1	2588	14	253	492	215	-492	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAAATGCCAGTTACA	NA	NA	NA	NA	NA	NA	NA	NA	50570578	50547589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570057_50570490
ENSMUSG00000000168.11_50547630_50570588_1	chr9	-	1846	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	492	1697	205	-532	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTCCAGATAATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	50570588	50547629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ENSMUSG00000000168.11_50547721_50569253_1	chr9	-	1277	10	ISM	ENSMUSG00000000168.11	ENST00000681339.1	2495	13	1560	623	1540	-623	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGAACTTCTACTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	50569253	50547720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144
ENSMUSG00000000168.11_50549291_50571080_1	chr9	-	1906	12	ISM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	0	3358	0	-2193	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTAGTGATGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	50571080	50549290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ENSMUSG00000000168.11_50549302_50570569_1	chr9	-	1276	11	ISM	ENSMUSG00000000168.11	ENST00000681339.1	2495	13	244	2204	224	-2204	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGGAAACCATTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	50570569	50549301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50549384_50551523_50551640_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ENSMUSG00000000168.11_50549338_50570642_1	chr9	-	1313	11	ISM	ENSMUSG00000000168.11	ENST00000681339.1	2495	13	171	2240	151	-2240	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATCACCCCTATTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	50570642	50549337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50549384_50551523_50551640_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ENSMUSG00000000171.6_50507657_50510153_1	chr9	-	987	2	ISM	ENSMUSG00000000171.6	ENSMUST00000000175.6	1231	4	4959	0	4959	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTATATAATGAAAATACAT	NA	NA	NA	NA	NA	NA	NA	NA	50510153	50507656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50508551_50510060
ENSMUSG00000000171.6_50507764_50510153_1	chr9	-	873	2	NNC	ENSMUSG00000000171.6	novel	1231	4	NA	NA	4959	-107	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCTGTCCAAAAGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	50510153	50507763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_50508551_50510067
ENSMUSG00000000171.6_50507764_50510153_2	chr9	-	880	2	ISM	ENSMUSG00000000171.6	ENSMUST00000000175.6	1231	4	4959	107	4959	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCTGTCCAAAAGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	50510153	50507763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_50508551_50510060
ENSMUSG00000000171.6_50507942_50515112_1	chr9	-	946	4	FSM	ENSMUSG00000000171.6	ENSMUST00000000175.6	1231	4	0	285	0	-285	multi-exon	FALSE	canonical	NA	NA	NA	NA	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGGGAACATTTAATCAGG	NA	NA	NA	NA	NA	NA	NA	NA	50515112	50507941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_50508551_50510060_50510206_50511847_50511965_50515037
ENSMUSG00000000194.14_31067822_31105471_1	chr2	+	2135	11	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	25494	3316	25494	-3316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCAGGTGAGTCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	31067821	31105471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ENSMUSG00000000194.14_31100458_31106257_1	chr2	+	2127	2	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	58130	2530	58130	-2530	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGGGTAGAGGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	31100457	31106257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31100583_31104255
ENSMUSG00000000253.14_45661030_45699858_2	chr13	+	1470	9	FSM	ENSMUSG00000000253.14	ENSMUST00000000260.13	1580	9	110	0	110	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGCTGGAGTTTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	45661029	45699858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45683183_45683266_45685769_45685877_45692500_45692544_45695954_45696115_45699348
ENSMUSG00000000253.14_45661149_45699858_3	chr13	+	1351	9	FSM	ENSMUSG00000000253.14	ENSMUST00000000260.13	1580	9	229	0	229	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGCTGGAGTTTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	45661148	45699858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45683183_45683266_45685769_45685877_45692500_45692544_45695954_45696115_45699348
ENSMUSG00000000266.12_139565508_139579343_1	chrX	+	1119	2	ISM	ENSMUSG00000000266.12	ENSMUST00000112988.8	2525	10	-313	85401	51	-85401	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGAACATGTACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	139565507	139579343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139566028_139578744
ENSMUSG00000000266.12_139565571_139579457_1	chrX	+	1170	2	ISM	ENSMUSG00000000266.12	ENSMUST00000112988.8	2525	10	-250	85287	114	-85287	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAAGCAGTATTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	139565570	139579457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139566028_139578744
ENSMUSG00000000266.12_139565705_139593909_1	chrX	+	1133	3	ISM	ENSMUSG00000000266.12	ENSMUST00000112988.8	2525	10	-116	70835	0	-70835	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTATGTACCAGTAACATT	NA	NA	NA	NA	NA	NA	NA	NA	139565704	139593909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139566028_139578744_139579461_139593815
ENSMUSG00000000266.12_139565923_139639167_1	chrX	+	1124	5	ISM	ENSMUSG00000000266.12	ENSMUST00000112988.8	2525	10	102	25577	102	-25577	5prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGACCAAGCACGGTT	NA	NA	NA	NA	NA	NA	NA	NA	139565922	139639167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139566028_139578744_139579461_139593815_139593910_139637181_139637292_139639068
ENSMUSG00000000266.12_139578777_139651642_1	chrX	+	1237	6	ISM	ENSMUSG00000000266.12	ENSMUST00000112988.8	2525	10	12956	13102	0	-13102	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACGACGAATTCAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	139578776	139651642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139579461_139593815_139593910_139637181_139637292_139639068_139639218_139650320_139650449_139651570
ENSMUSG00000000266.12_139578904_139651672_1	chrX	+	1140	6	ISM	ENSMUSG00000000266.12	ENSMUST00000112988.8	2525	10	13083	13072	127	-13072	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCAGTACACCATATTC	NA	NA	NA	NA	NA	NA	NA	NA	139578903	139651672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139579461_139593815_139593910_139637181_139637292_139639068_139639218_139650320_139650449_139651570
ENSMUSG00000000266.12_139579072_139661966_1	chrX	+	1137	7	ISM	ENSMUSG00000000266.12	ENSMUST00000112988.8	2525	10	13251	2778	295	-2778	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCCAACATTAAGCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	139579071	139661966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139579461_139593815_139593910_139637181_139637292_139639068_139639218_139650320_139650449_139651570_139651809_139661937
ENSMUSG00000000266.12_139579101_139662055_1	chrX	+	1197	7	ISM	ENSMUSG00000000266.12	ENSMUST00000112988.8	2525	10	13280	2689	324	-2689	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCCGGAACAGCGAACC	NA	NA	NA	NA	NA	NA	NA	NA	139579100	139662055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139579461_139593815_139593910_139637181_139637292_139639068_139639218_139650320_139650449_139651570_139651809_139661937
ENSMUSG00000000266.12_139579234_139663717_1	chrX	+	1158	8	ISM	ENSMUSG00000000266.12	ENSMUST00000112988.8	2525	10	13413	1027	457	-1027	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGATTGCAGATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	139579233	139663717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139579461_139593815_139593910_139637181_139637292_139639068_139639218_139650320_139650449_139651570_139651809_139661937_139662096_139663663
ENSMUSG00000000266.12_139579288_139663771_1	chrX	+	1158	8	ISM	ENSMUSG00000000266.12	ENSMUST00000112988.8	2525	10	13467	973	511	-973	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGAGATTTAGTGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	139579287	139663771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139579461_139593815_139593910_139637181_139637292_139639068_139639218_139650320_139650449_139651570_139651809_139661937_139662096_139663663
ENSMUSG00000000266.12_139579371_139663824_1	chrX	+	1128	8	ISM	ENSMUSG00000000266.12	ENSMUST00000112988.8	2525	10	13550	920	594	-920	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTGGCTGCCACTACTG	NA	NA	NA	NA	NA	NA	NA	NA	139579370	139663824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139579461_139593815_139593910_139637181_139637292_139639068_139639218_139650320_139650449_139651570_139651809_139661937_139662096_139663663
ENSMUSG00000000266.12_139593829_139664315_1	chrX	+	1160	8	ISM	ENSMUSG00000000266.12	ENSMUST00000112988.8	2525	10	28008	429	15052	-429	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAACTTCGTGGTTCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	139593828	139664315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139593910_139637181_139637292_139639068_139639218_139650320_139650449_139651570_139651809_139661937_139662096_139663663_139663872_139664227
ENSMUSG00000000266.12_139639171_139664585_1	chrX	+	1137	6	ISM	ENSMUSG00000000266.12	ENSMUST00000112988.8	2525	10	73350	159	60394	-159	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAAGAATCCCCTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	139639170	139664585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139639218_139650320_139650449_139651570_139651809_139661937_139662096_139663663_139663872_139664227
ENSMUSG00000000266.12_139650359_139664744_1	chrX	+	1211	5	ISM	ENSMUSG00000000266.12	ENSMUST00000112988.8	2525	10	84538	0	71582	0	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTAGATATCGTAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	139650358	139664744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139650449_139651570_139651809_139661937_139662096_139663663_139663872_139664227
ENSMUSG00000000266.12_139650407_139664744_1	chrX	+	1163	5	ISM	ENSMUSG00000000266.12	ENSMUST00000112988.8	2525	10	84586	0	71630	0	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTAGATATCGTAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	139650406	139664744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139650449_139651570_139651809_139661937_139662096_139663663_139663872_139664227
ENSMUSG00000000266.12_139661933_139664936_1	chrX	+	1080	3	ISM	ENSMUSG00000000266.12	ENSMUST00000112993.2	5916	9	83156	3528	83156	192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTAGCCCTTCTAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	139661932	139664936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139662096_139663663_139663872_139664227
ENSMUSG00000000266.12_139661954_139665022_1	chrX	+	1145	3	ISM	ENSMUSG00000000266.12	ENSMUST00000112993.2	5916	9	83177	3442	83177	278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTAATAAAAGAGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	139661953	139665022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139662096_139663663_139663872_139664227
ENSMUSG00000000266.12_139662033_139665084_1	chrX	+	1128	3	ISM	ENSMUSG00000000266.12	ENSMUST00000112993.2	5916	9	83256	3380	83256	340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTCATTTTATGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	139662032	139665084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139662096_139663663_139663872_139664227
ENSMUSG00000000266.12_139663696_139665199_1	chrX	+	1148	2	ISM	ENSMUSG00000000266.12	ENSMUST00000112993.2	5916	9	84919	3265	84919	455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCATTCCTAACTCTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	139663695	139665199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139663872_139664227
ENSMUSG00000000266.12_139663775_139665255_1	chrX	+	1125	2	ISM	ENSMUSG00000000266.12	ENSMUST00000112993.2	5916	9	84998	3209	84998	-417	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTACAGCCGTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	139663774	139665255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139663872_139664227
ENSMUSG00000000278.11_88814946_88834697_1	chr11	-	1430	9	ISM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	11594	100	11594	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATCCATATTGTACGCT	NA	NA	NA	NA	NA	NA	NA	NA	88834697	88814945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622
ENSMUSG00000000278.11_88815058_88835268_1	chr11	-	1386	10	ISM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	11023	212	11023	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACAAAAGCAGTGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	88835268	88815057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200
ENSMUSG00000000278.11_88815170_88837992_1	chr11	-	1384	11	ISM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	8299	324	8299	-324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGCATCCGCAGCTACAT	NA	NA	NA	NA	NA	NA	NA	NA	88837992	88815169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970
ENSMUSG00000000278.11_88815231_88838032_1	chr11	-	1363	11	ISM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	8259	385	8259	-385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCACATGTAAATCCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	88838032	88815230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970
ENSMUSG00000000278.11_88815330_88843310_1	chr11	-	1371	12	ISM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	2981	484	2981	-484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATCAGTTCTGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	88843310	88815329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231
ENSMUSG00000000278.11_88815348_88843342_1	chr11	-	1385	12	ISM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	2949	502	2949	-502	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTCTGTGTCTACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	88843342	88815347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231
ENSMUSG00000000278.11_88815494_88846291_1	chr11	-	1449	13	FSM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	0	648	0	-648	multi-exon	FALSE	canonical	NA	NA	NA	NA	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAGCTGAGCTGGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	88846291	88815493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ENSMUSG00000000282.13_74721961_74733126_1	chr11	+	407	2	FSM	ENSMUSG00000000282.13	ENST00000575394.1	602	2	195	0	195	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGCAGACAGGCCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	74721960	74733126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_74722228_74732986
ENSMUSG00000000290.14_77381913_77393260_1	chr10	+	907	7	ISM	ENSMUSG00000000290.14	ENST00000355153.8	2125	13	17	7818	17	-7818	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCGGACACCCTGAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	77381912	77393260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77382028_77382959_77383131_77384379_77384622_77385779_77385936_77386806_77386903_77391921_77392012_77393223
ENSMUSG00000000290.14_77381969_77393317_1	chr10	+	908	7	ISM	ENSMUSG00000000290.14	ENST00000355153.8	2125	13	73	7761	73	-7761	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCAAATCCCGTGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	77381968	77393317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77382028_77382959_77383131_77384379_77384622_77385779_77385936_77386806_77386903_77391921_77392012_77393223
ENSMUSG00000000290.14_77383008_77395349_1	chr10	+	1073	8	ISM	ENSMUSG00000000290.14	ENST00000397857.5	1996	12	51	5729	51	-5729	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTCAGGGTCGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	77383007	77395349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77383131_77384379_77384622_77385779_77385936_77386806_77386903_77391921_77392012_77393223_77393365_77393785_77393974_77395312
ENSMUSG00000000290.14_77383064_77395404_1	chr10	+	1072	8	ISM	ENSMUSG00000000290.14	ENST00000397857.5	1996	12	107	5674	107	-5674	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCATCGTGTGCTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	77383063	77395404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77383131_77384379_77384622_77385779_77385936_77386806_77386903_77391921_77392012_77393223_77393365_77393785_77393974_77395312
ENSMUSG00000000290.14_77384379_77395557_1	chr10	+	1159	7	ISM	ENSMUSG00000000290.14	ENST00000397854.7	1824	11	1	5521	1	-5521	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTGTTGGGGGCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	77384378	77395557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77384622_77385779_77385936_77386806_77386903_77391921_77392012_77393223_77393365_77393785_77393974_77395312
ENSMUSG00000000290.14_77384497_77396025_1	chr10	+	1083	8	ISM	ENSMUSG00000000290.14	ENSMUST00000000299.14	2970	16	18411	5495	119	-5053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACGAGGGCTCGGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	77384496	77396025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77384622_77385779_77385936_77386806_77386903_77391921_77392012_77393223_77393365_77393785_77393974_77395312_77395558_77395983
ENSMUSG00000000290.14_77384558_77396071_1	chr10	+	1068	8	ISM	ENSMUSG00000000290.14	ENSMUST00000000299.14	2970	16	18472	5449	180	-5007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGCACGGCTGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	77384557	77396071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77384622_77385779_77385936_77386806_77386903_77391921_77392012_77393223_77393365_77393785_77393974_77395312_77395558_77395983
ENSMUSG00000000290.14_77385818_77396085_1	chr10	+	980	7	ISM	ENSMUSG00000000290.14	ENSMUST00000000299.14	2970	16	19732	5435	1440	-4993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAGAGTGCAGTGGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	77385817	77396085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77385936_77386806_77386903_77391921_77392012_77393223_77393365_77393785_77393974_77395312_77395558_77395983
ENSMUSG00000000290.14_77385895_77396892_1	chr10	+	1070	8	ISM	ENSMUSG00000000290.14	ENSMUST00000000299.14	2970	16	19809	4628	1517	-4186	internal_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAGTGTTCAGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	77385894	77396892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77385936_77386806_77386903_77391921_77392012_77393223_77393365_77393785_77393974_77395312_77395558_77395983_77396207_77396846
ENSMUSG00000000290.14_77391974_77400516_1	chr10	+	1083	7	ISM	ENSMUSG00000000290.14	ENSMUST00000000299.14	2970	16	25888	1004	7596	-562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAGGTGTCGTACTGATT	NA	NA	NA	NA	NA	NA	NA	NA	77391973	77400516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77392012_77393223_77393365_77393785_77393974_77395312_77395558_77395983_77396207_77396846_77397050_77400471
ENSMUSG00000000290.14_77393220_77400638_1	chr10	+	1171	6	ISM	ENSMUSG00000000290.14	ENSMUST00000000299.14	2970	16	27134	882	8842	-440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGGCCTTGCTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	77393219	77400638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77393365_77393785_77393974_77395312_77395558_77395983_77396207_77396846_77397050_77400471
ENSMUSG00000000290.14_77393785_77401078_1	chr10	+	1094	6	ISM	ENSMUSG00000000290.14	ENSMUST00000000299.14	2970	16	27699	442	9407	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTTATCATAATCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	77393784	77401078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77393974_77395312_77395558_77395983_77396207_77396846_77397050_77400471_77400639_77401011
ENSMUSG00000000303.13_107380154_107396878_2	chr8	+	2034	13	FSM	ENSMUSG00000000303.13	ENST00000261769.10	2033	13	3	-4	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	107380153	107396878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392836_107396754
ENSMUSG00000000305.13_179484843_179532769_1	chr2	+	1582	9	ISM	ENSMUSG00000000305.13	ENST00000543233.2	2179	13	20211	4938	20211	-3717	internal_fragment	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTTCAATGTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	179484842	179532769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179484918_179489012_179489158_179501909_179502083_179515864_179516003_179523602_179523789_179527646_179527901_179528512_179528656_179530881_179531116_179532535
ENSMUSG00000000305.13_179489052_179535062_1	chr2	+	1546	9	ISM	ENSMUSG00000000305.13	ENST00000543233.2	2179	13	24420	2645	24420	-1424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGACGTGAGGGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	179489051	179535062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179489158_179501909_179502083_179515864_179516003_179523602_179523789_179527646_179527901_179528512_179528656_179530881_179531116_179532535_179532770_179534984
ENSMUSG00000000305.13_179501906_179535925_1	chr2	+	1611	9	ISM	ENSMUSG00000000305.13	ENST00000543233.2	2179	13	37274	1782	-33796	-561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	831	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTACCCAGTCAGGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	179501905	179535925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179502083_179515864_179516003_179523602_179523789_179527646_179527901_179528512_179528656_179530881_179531116_179532535_179532770_179534984_179535125_179535820
ENSMUSG00000000305.13_179515863_179537578_1	chr2	+	1570	9	ISM	ENSMUSG00000000305.13	ENST00000543233.2	2179	13	51231	129	-19839	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTCTACTGCGGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	179515862	179537578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179516003_179523602_179523789_179527646_179527901_179528512_179528656_179530881_179531116_179532535_179532770_179534984_179535125_179535820_179535986_179537504
ENSMUSG00000000305.13_179523603_179537707_1	chr2	+	1559	8	ISM	ENSMUSG00000000305.13	ENST00000543233.2	2179	13	58971	0	-12099	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAACCAACCTCACCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	179523602	179537707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179523789_179527646_179527901_179528512_179528656_179530881_179531116_179532535_179532770_179534984_179535125_179535820_179535986_179537504
ENSMUSG00000000326.14_18226016_18229534_1	chr16	-	877	2	ISM	ENSMUSG00000000326.14	ENSMUST00000165430.8	1978	5	2710	380	2710	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACTGGAAGAGGAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	18229534	18226015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18226791_18229432
ENSMUSG00000000326.14_18226294_18230070_1	chr16	-	823	3	ISM	ENSMUSG00000000326.14	ENSMUST00000165430.8	1978	5	2174	658	2174	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	18230070	18226293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18226791_18229432_18229565_18229876
ENSMUSG00000000326.14_18226472_18230616_1	chr16	-	822	4	ISM	ENSMUSG00000000326.14	ENSMUST00000165430.8	1978	5	1628	836	1628	-178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACACTGGCACATTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	18230616	18226471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439
ENSMUSG00000000326.14_18226659_18245170_1	chr16	-	791	5	FSM	ENSMUSG00000000326.14	ENSMUST00000115609.10	1866	5	432	643	184	-365	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGAAAGTGGTGGACGG	NA	NA	NA	NA	NA	NA	NA	NA	18245170	18226658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18245105
ENSMUSG00000000326.14_18226671_18245174_1	chr16	-	840	6	FSM	ENSMUSG00000000326.14	ENSMUST00000000335.12	1397	6	180	377	180	-377	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACCTGGAGTACATGAA	NA	NA	NA	NA	NA	NA	NA	NA	18245174	18226670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
ENSMUSG00000000326.14_18226723_18245223_1	chr16	-	837	6	FSM	ENSMUSG00000000326.14	ENSMUST00000000335.12	1397	6	131	429	131	-429	multi-exon	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGCGTATGTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	18245223	18226722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
ENSMUSG00000000326.14_18226737_18245237_1	chr16	-	780	5	FSM	ENSMUSG00000000326.14	ENSMUST00000115609.10	1866	5	365	721	117	-443	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGAACCCCTGACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	18245237	18226736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18245105
ENSMUSG00000000326.14_18226771_18245354_1	chr16	-	920	6	FSM	ENSMUSG00000000326.14	ENSMUST00000000335.12	1397	6	0	477	0	-477	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGACGGTGCTCCTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	18245354	18226770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
ENSMUSG00000000326.14_18229513_18245354_1	chr16	-	763	4	ISM	ENSMUSG00000000326.14	ENSMUST00000115609.10	1866	5	248	3497	0	-3219	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACGATGTGGACACATTA	NA	NA	NA	NA	NA	NA	NA	NA	18245354	18229512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18229565_18229876_18230071_18230439_18230708_18245105
ENSMUSG00000000326.14_18229917_18245472_1	chr16	-	789	3	ISM	ENSMUSG00000000326.14	ENSMUST00000115609.10	1866	5	130	3901	-118	-3623	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCAGCAAATGCTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	18245472	18229916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18230071_18230439_18230708_18245105
ENSMUSG00000000326.14_18229949_18232093_1	chr16	-	468	3	ISM	ENSMUSG00000000326.14	ENSMUST00000165430.8	1978	5	151	4313	151	-3655	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGGAGATTAACCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	18232093	18229948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18230071_18230439_18230708_18232015
ENSMUSG00000000326.14_18229975_18245602_1	chr16	-	861	3	ISM	ENSMUSG00000000326.14	ENSMUST00000115609.10	1866	5	0	3959	0	-3681	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCACCTGGAGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	18245602	18229974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18230071_18230439_18230708_18245105
ENSMUSG00000000326.14_18230010_18232134_1	chr16	-	448	3	ISM	ENSMUSG00000000326.14	ENSMUST00000165430.8	1978	5	110	4374	110	-3716	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTGGCTACTCAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	18232134	18230009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18230071_18230439_18230708_18232015
ENSMUSG00000000339.15_116286685_116293250_1	chr3	-	387	5	ISM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	8607	4073	8607	-4073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCACACTCCACACGCAG	NA	NA	NA	NA	NA	NA	NA	NA	116293250	116286684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194
ENSMUSG00000000339.15_116287800_116294819_1	chr3	-	412	5	ISM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	7038	5188	7038	-5188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGCTGAAATGCTATTA	NA	NA	NA	NA	NA	NA	NA	NA	116294819	116287799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760
ENSMUSG00000000339.15_116291312_116300511_1	chr3	-	405	5	ISM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	1346	8700	1346	-8700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATCTGTACGTCAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	116300511	116291311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116291364_116293194_116293337_116294760_116294820_116297993_116298118_116300483
ENSMUSG00000000339.15_116293311_116301436_1	chr3	-	390	5	ISM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	421	10699	421	-10699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGATTGTCCGAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	116301436	116293310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116293337_116294760_116294820_116297993_116298118_116300483_116300628_116301399
ENSMUSG00000000339.15_116300483_116301782_1	chr3	-	435	3	ISM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	75	17871	75	-17871	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATGTCTCACTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	116301782	116300482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116300628_116301399_116301501_116301593
ENSMUSG00000000346.10_100513539_100517735_1	chr15	+	842	4	FSM	ENSMUSG00000000346.10	ENST00000549555.5	870	4	30	-2	30	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTGCCAAATTATTC	NA	NA	NA	NA	NA	NA	NA	NA	100513538	100517735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_100513606_100514793_100514913_100515805_100515975_100517248
ENSMUSG00000000346.10_100513541_100517735_1	chr15	+	839	4	NNC	ENSMUSG00000000346.10	novel	2135	4	NA	NA	32	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTGCCAAATTATTC	NA	NA	NA	NA	NA	NA	NA	NA	100513540	100517735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_100513606_100514793_100514913_100515805_100515974_100517248
ENSMUSG00000000355.14_37689532_37694899_1	chrX	+	459	4	ISM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	0	7404	0	-7328	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCTCCCGGAGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	37689531	37694899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815
ENSMUSG00000000355.14_37689637_37694949_1	chrX	+	404	4	ISM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	105	7354	-94	-7278	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCTTCCCAGGGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	37689636	37694949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815
ENSMUSG00000000355.14_37689764_37691550_1	chrX	+	762	3	ISM	ENSMUSG00000000355.14	ENST00000371315.3	1127	6	33	10677	33	-10677	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCTCTTATACATTAG	NA	NA	NA	NA	NA	NA	NA	NA	37689763	37691550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_37690275_37690805_37690959_37691452
ENSMUSG00000000355.14_37689969_37700710_1	chrX	+	759	5	ISM	ENSMUSG00000000355.14	ENST00000371315.3	1127	6	238	1517	238	-1517	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTCACTTTAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	37689968	37700710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_37690275_37690805_37690959_37691452_37691551_37694815_37694950_37700642
ENSMUSG00000000355.14_37690176_37702277_1	chrX	+	732	6	FSM	ENSMUSG00000000355.14	ENST00000371315.3	1127	6	445	-50	445	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAAAATTCCGCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	37690175	37702277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_37690275_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
ENSMUSG00000000359.4_152470084_152475429_1	chr2	+	406	3	ISM	ENSMUSG00000000359.4	ENSMUST00000000369.4	1663	5	1213	1685	1213	-1685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACTCCATAGCGGATCG	NA	NA	NA	NA	NA	NA	NA	NA	152470083	152475429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152470356_152471096_152471177_152475375
ENSMUSG00000000359.4_152470301_152476412_1	chr2	+	384	4	ISM	ENSMUSG00000000359.4	ENSMUST00000000369.4	1663	5	1430	702	1430	-702	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGCCACTCTGCAGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	152470300	152476412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152470356_152471096_152471177_152475375_152475578_152476365
ENSMUSG00000000378.16_6496910_6546744_1	chr11	+	1661	9	FSM	ENSMUSG00000000378.16	ENST00000541586.5	1719	9	42	16	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTTGTCAAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	6496909	6546744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_6497030_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ENSMUSG00000000378.16_6496910_6546744_2	chr11	+	1829	10	NNC	ENSMUSG00000000378.16	novel	1858	10	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTTGTCAAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	6496909	6546744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_6497030_6519963_6520132_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ENSMUSG00000000378.16_6496910_6546744_3	chr11	+	1830	10	NNC	ENSMUSG00000000378.16	novel	1858	10	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTTGTCAAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	6496909	6546744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033_6535218_6539436_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ENSMUSG00000000378.16_6510892_6546744_1	chr11	+	2060	10	NNC	ENSMUSG00000000378.16	novel	2071	10	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTTGTCAAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	6510891	6546744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_6511242_6519963_6520138_6534519_6534604_6535033_6535218_6539436_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ENSMUSG00000000378.16_6510892_6546744_2	chr11	+	2065	10	FSM	ENSMUSG00000000378.16	ENST00000475551.5	2071	10	8	-2	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTTGTCAAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	6510891	6546744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_6511242_6519963_6520138_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ENSMUSG00000000378.16_6520006_6544166_1	chr11	+	616	6	ISM	ENSMUSG00000000378.16	ENST00000474617.1	1422	7	44	2556	44	-2556	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGGAGATCCAGCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	6520005	6544166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6520138_6534519_6534604_6535033_6535218_6543066_6543125_6543601_6543741_6544147
ENSMUSG00000000378.16_6520058_6544269_1	chr11	+	667	6	ISM	ENSMUSG00000000378.16	ENST00000474617.1	1422	7	96	2453	96	-2453	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTCCTGCTACTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	6520057	6544269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6520138_6534519_6534604_6535033_6535218_6543066_6543125_6543601_6543741_6544147
ENSMUSG00000000378.16_6520117_6544269_1	chr11	+	608	6	ISM	ENSMUSG00000000378.16	ENST00000474617.1	1422	7	155	2453	155	-2453	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTCCTGCTACTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	6520116	6544269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6520138_6534519_6534604_6535033_6535218_6543066_6543125_6543601_6543741_6544147
ENSMUSG00000000378.16_6534544_6546134_1	chr11	+	634	6	ISM	ENSMUSG00000000378.16	ENST00000474617.1	1422	7	14582	588	14582	-588	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCATTGGCGTGAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	6534543	6546134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6534604_6535033_6535218_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ENSMUSG00000000378.16_6535073_6546164_1	chr11	+	565	5	ISM	ENSMUSG00000000378.16	ENST00000474617.1	1422	7	15111	558	15111	-558	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCACTGACAGCTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	6535072	6546164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6535218_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ENSMUSG00000000378.16_6535126_6546219_1	chr11	+	567	5	ISM	ENSMUSG00000000378.16	ENST00000474617.1	1422	7	15164	503	15164	-503	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCATCAATGGGAACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	6535125	6546219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6535218_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ENSMUSG00000000378.16_6535181_6546266_1	chr11	+	559	5	ISM	ENSMUSG00000000378.16	ENST00000474617.1	1422	7	15219	456	15219	-456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCTCAGAGGGGGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	6535180	6546266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6535218_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ENSMUSG00000000384.16_6566425_6568130_1	chr11	-	685	4	ISM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	7913	2	7913	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGCTATCTTCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	6568130	6566424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962
ENSMUSG00000000384.16_6566587_6568504_1	chr11	-	646	5	ISM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	7539	164	7539	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGACCTGACTGCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	6568504	6566586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459
ENSMUSG00000000384.16_6566637_6568582_1	chr11	-	674	5	ISM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	7461	214	7461	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCTGAGGAGCTAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	6568582	6566636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459
ENSMUSG00000000384.16_6567528_6569625_1	chr11	-	677	5	ISM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	6418	1105	6418	-1105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTAAAAGGTATGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	6569625	6567527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555
ENSMUSG00000000384.16_6567568_6569686_1	chr11	-	698	5	ISM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	6357	1145	6357	-1145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTGCCCAGCCAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	6569686	6567567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555
ENSMUSG00000000384.16_6569586_6573875_1	chr11	-	684	4	ISM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	2168	3163	2168	-3163	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCCTTTGTTTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	6573875	6569585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6569714_6569971_6570144_6570741_6571066_6573815
ENSMUSG00000000384.16_6570002_6574049_1	chr11	-	700	3	ISM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	1994	3579	1994	-3579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCTCCTGGACCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	6574049	6570001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6570144_6570741_6571066_6573815
ENSMUSG00000000384.16_6570766_6574201_1	chr11	-	686	2	ISM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	1842	4343	1842	-4343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATGAACCACCTGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	6574201	6570765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6571066_6573815
ENSMUSG00000000384.16_6570836_6574241_1	chr11	-	656	2	ISM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	1802	4413	1802	-4413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAGATCAACGACA	NA	NA	NA	NA	NA	NA	NA	NA	6574241	6570835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6571066_6573815
ENSMUSG00000000384.16_6570997_6576022_1	chr11	-	660	4	ISM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	21	4574	21	-4574	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCCAAGGAGCTGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	6576022	6570996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6571066_6573815_6574284_6575148_6575214_6575964
ENSMUSG00000000394.16_62307247_62310865_1	chr2	-	278	3	ISM	ENSMUSG00000000394.16	ENST00000375497.3	628	4	3272	79	3129	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTGAGTTCTTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	62310865	62307246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62307306_62308898_62309061_62310808
ENSMUSG00000000394.16_62310809_62314023_1	chr2	-	214	2	ISM	ENSMUSG00000000394.16	ENST00000375497.3	628	4	114	3641	-29	-3641	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGAACAGTAGTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	62314023	62310808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62310909_62313909
ENSMUSG00000000399.11_126798684_126813254_1	chr6	-	850	6	ISM	ENSMUSG00000000399.11	ENSMUST00000205002.3	1445	11	12834	0	12834	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGATCTGAATTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	126813254	126798683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181
ENSMUSG00000000399.11_126798795_126813259_1	chr6	-	744	6	ISM	ENSMUSG00000000399.11	ENSMUST00000205002.3	1445	11	12829	111	12829	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGGAATTCTTATACCA	NA	NA	NA	NA	NA	NA	NA	NA	126813259	126798794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181
ENSMUSG00000000399.11_126798959_126819175_1	chr6	-	839	8	ISM	ENSMUSG00000000399.11	ENSMUST00000088194.7	1238	11	6913	0	6913	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	744	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAAGAGTCACTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	126819175	126798958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083
ENSMUSG00000000399.11_126799092_126821318_1	chr6	-	754	9	ISM	ENSMUSG00000000399.11	ENSMUST00000088194.7	1238	11	4770	133	4770	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCACTGGAGCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	126821318	126799091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270
ENSMUSG00000000399.11_126801929_126821785_1	chr6	-	745	9	ISM	ENSMUSG00000000399.11	ENSMUST00000088194.7	1238	11	4303	2970	4303	-2970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTGGACGACGAAGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	126821785	126801928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753
ENSMUSG00000000399.11_126804503_126821924_1	chr6	-	847	8	ISM	ENSMUSG00000000399.11	ENSMUST00000088194.7	1238	11	4164	5544	4164	-5544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTACGGTGCTGTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	126821924	126804502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753
ENSMUSG00000000399.11_126809434_126826088_1	chr6	-	814	8	ISM	ENSMUSG00000000399.11	ENSMUST00000205002.3	1445	11	0	10750	0	-10475	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGCCTAGAGTTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	126826088	126809433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126826026
ENSMUSG00000000420.16_24379143_24404726_1	chr18	+	887	6	ISM	ENSMUSG00000000420.16	ENSMUST00000178605.2	3796	12	13489	15141	13489	-15141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGGGACAGGGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	24379142	24404726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642
ENSMUSG00000000420.16_24387600_24405836_1	chr18	+	938	6	ISM	ENSMUSG00000000420.16	ENSMUST00000178605.2	3796	12	21946	14031	21946	-14031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTATTTCTCATTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	24387599	24405836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718
ENSMUSG00000000420.16_24402554_24418037_1	chr18	+	895	6	ISM	ENSMUSG00000000420.16	ENSMUST00000178605.2	3796	12	36900	1830	36900	-1830	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGCCATTAAAACTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	24402553	24418037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ENSMUSG00000000420.16_24405767_24418336_1	chr18	+	896	4	ISM	ENSMUSG00000000420.16	ENSMUST00000178605.2	3796	12	40113	1531	40113	-1531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTGGAAAAGAGCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	24405766	24418336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24405859_24413000_24413100_24415158_24415294_24417766
ENSMUSG00000000435.2_107319604_107320533_1	chr10	-	495	2	ISM	ENSMUSG00000000435.2	ENSMUST00000000445.2	2083	3	1462	835	1462	-835	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAATTGACAGTTACTTA	NA	NA	NA	NA	NA	NA	NA	NA	107320533	107319603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_107320072_107320506
ENSMUSG00000000435.2_107319692_107320565_1	chr10	-	439	2	ISM	ENSMUSG00000000435.2	ENSMUST00000000445.2	2083	3	1430	923	1430	-923	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGCTTTCGGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	107320565	107319691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_107320072_107320506
ENSMUSG00000000435.2_107319895_107321436_1	chr10	-	398	3	FSM	ENSMUSG00000000435.2	ENSMUST00000000445.2	2083	3	559	1126	559	-1126	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACGTATTATGAACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	107321436	107319894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_107320072_107320506_107320583_107321291
ENSMUSG00000000435.2_107320507_107321672_1	chr10	-	457	2	ISM	ENSMUSG00000000435.2	ENSMUST00000000445.2	2083	3	323	1738	323	-1738	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAACTGATAACTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	107321672	107320506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_107320583_107321291
ENSMUSG00000000439.10_115578922_115595647_1	chr6	+	2233	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	59	3938	59	-3938	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATTCCTGGCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	115578921	115595647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ENSMUSG00000000439.10_115587545_115595915_1	chr6	+	2254	6	ISM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	8682	3670	8682	-3670	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGTTCCCAATTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	115587544	115595915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ENSMUSG00000000439.10_115588691_115596130_1	chr6	+	2257	5	ISM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	9828	3455	9828	-3455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAAAACATGCATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	115588690	115596130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ENSMUSG00000000440.13_115349633_115466993_1	chr6	+	1984	9	FSM	ENSMUSG00000000440.13	ENST00000683586.1	2472	9	121	367	121	-174	multi-exon	TRUE	canonical	NA	NA	NA	NA	2209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCAGAGTCCTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	115349632	115466993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_115349851_115349998_115350427_115360639_115360705_115416800_115417029_115418452_115418623_115427904_115428044_115440046_115440247_115449821_115450273_115466908
ENSMUSG00000000440.13_115349668_115467060_1	chr6	+	2016	9	FSM	ENSMUSG00000000440.13	ENST00000683586.1	2472	9	156	300	156	-107	multi-exon	FALSE	canonical	NA	NA	NA	NA	2865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGCACGTGCAGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	115349667	115467060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_115349851_115349998_115350427_115360639_115360705_115416800_115417029_115418452_115418623_115427904_115428044_115440046_115440247_115449821_115450273_115466908
ENSMUSG00000000440.13_115349734_115467100_1	chr6	+	1990	9	FSM	ENSMUSG00000000440.13	ENST00000683586.1	2472	9	222	260	222	-67	multi-exon	FALSE	canonical	NA	NA	NA	NA	3101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGACATGAGCCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	115349733	115467100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_115349851_115349998_115350427_115360639_115360705_115416800_115417029_115418452_115418623_115427904_115428044_115440046_115440247_115449821_115450273_115466908
ENSMUSG00000000440.13_115350141_115467360_1	chr6	+	1991	8	FSM	ENSMUSG00000000440.13	ENST00000643197.2	1817	8	19	-193	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTATAGTATTTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	115350140	115467360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_115350427_115360639_115360705_115416800_115417029_115418452_115418623_115427904_115428044_115440046_115440247_115449821_115450273_115466908
ENSMUSG00000000440.13_115416936_115467240_1	chr6	+	934	5	FSM	ENSMUSG00000000440.13	ENST00000397000.6	1063	5	136	-7	136	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTGTGAAAAAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	115416935	115467240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_115417029_115418452_115418623_115427904_115428044_115440046_115440247_115466908
ENSMUSG00000000441.18_115596312_115599902_1	chr6	-	557	6	ISM	ENSMUSG00000000441.18	ENSMUST00000112949.8	2946	17	53023	782	53023	-761	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTTCCCTGCATCGGG	NA	NA	NA	NA	NA	NA	NA	NA	115599902	115596311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837
ENSMUSG00000000441.18_115596840_115603369_1	chr6	-	584	6	ISM	ENSMUSG00000000441.18	ENSMUST00000112949.8	2946	17	49556	1310	49556	-1289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTCCAGTCCGACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	115603369	115596839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251
ENSMUSG00000000441.18_115597226_115603720_1	chr6	-	538	6	ISM	ENSMUSG00000000441.18	ENSMUST00000112949.8	2946	17	49205	1696	49205	-1675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCTGGAGTGGTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	115603720	115597225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672
ENSMUSG00000000441.18_115597226_115603788_1	chr6	-	606	6	ISM	ENSMUSG00000000441.18	ENSMUST00000112949.8	2946	17	49137	1696	49137	-1675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCTGGAGTGGTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	115603788	115597225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672
ENSMUSG00000000441.18_115599886_115608199_1	chr6	-	572	7	ISM	ENSMUSG00000000441.18	ENST00000442415.7	2991	18	45279	4335	44726	-4335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTCCAGCTAATTGACA	NA	NA	NA	NA	NA	NA	NA	NA	115608199	115599885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115607601_115607662_115608175
ENSMUSG00000000441.18_115599957_115608237_1	chr6	-	539	7	ISM	ENSMUSG00000000441.18	ENST00000442415.7	2991	18	45241	4406	44688	-4406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATTGTGACTCAGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	115608237	115599956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115607601_115607662_115608175
ENSMUSG00000000441.18_115600484_115608229_1	chr6	-	354	5	ISM	ENSMUSG00000000441.18	ENSMUST00000112949.8	2946	17	44696	4954	44696	-4933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGACCCAACTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	115608229	115600483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175
ENSMUSG00000000441.18_115603319_115611582_1	chr6	-	589	7	ISM	ENSMUSG00000000441.18	ENST00000442415.7	2991	18	41896	7768	41343	-7768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGATGCTGTCTACTCG	NA	NA	NA	NA	NA	NA	NA	NA	115611582	115603318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_115603370_115603672_115603801_115603899_115603928_115607601_115607662_115608175_115608330_115609857_115609957_115611513
ENSMUSG00000000441.18_115607601_115612042_1	chr6	-	576	5	ISM	ENSMUSG00000000441.18	ENST00000442415.7	2991	18	41436	12050	40883	-12050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTATTTTCTTCATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	115612042	115607600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_115607662_115608175_115608330_115609857_115609957_115611513_115611672_115611938
ENSMUSG00000000441.18_115608175_115614672_1	chr6	-	628	5	ISM	ENSMUSG00000000441.18	ENSMUST00000112949.8	2946	17	38253	12645	38253	-12624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGGGCCCCTTGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	115614672	115608174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559
ENSMUSG00000000441.18_115608294_115621406_1	chr6	-	545	6	ISM	ENSMUSG00000000441.18	ENSMUST00000112949.8	2946	17	31519	12764	31519	-12743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACACCTCCAGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	115621406	115608293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370
ENSMUSG00000000441.18_115611579_115653263_1	chr6	-	609	5	ISM	ENSMUSG00000000441.18	ENST00000442415.7	2991	18	215	16028	215	-16028	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGCACTGTAGCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	115653263	115611578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ENSMUSG00000000441.18_115621500_115653427_1	chr6	-	335	2	ISM	ENSMUSG00000000441.18	ENST00000442415.7	2991	18	51	25949	51	-25949	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTCCCCTACCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	115653427	115621499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_115621604_115653196
ENSMUSG00000000538.19_60120728_60171104_1	chr11	-	1297	11	NNC	ENSMUSG00000000538.19	novel	1264	11	NA	NA	3	43	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTCCCGCCTTCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	60171104	60120727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_60121068_60121926_60121964_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136504_60139756_60139891_60149681_60149799_60161143_60161294_60165749_60165829_60171024
ENSMUSG00000000538.19_60120728_60171104_3	chr11	-	1300	11	NNC	ENSMUSG00000000538.19	novel	1264	11	NA	NA	3	43	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTCCCGCCTTCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	60171104	60120727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_60121068_60121926_60121964_60132643_60132720_60133533_60133652_60135887_60136004_60136457_60136511_60139756_60139891_60149681_60149799_60161143_60161294_60165749_60165829_60171024
ENSMUSG00000000538.19_60120728_60171104_5	chr11	-	1297	11	NNC	ENSMUSG00000000538.19	novel	1264	11	NA	NA	3	43	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	873	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTCCCGCCTTCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	60171104	60120727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_60121068_60121926_60121964_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60161143_60161294_60165749_60165822_60171024
ENSMUSG00000000538.19_60120728_60171104_6	chr11	-	1304	11	FSM	ENSMUSG00000000538.19	ENST00000540946.5	1264	11	3	-43	3	43	multi-exon	FALSE	canonical	NA	NA	NA	NA	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTCCCGCCTTCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	60171104	60120727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_60121068_60121926_60121964_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60161143_60161294_60165749_60165829_60171024
ENSMUSG00000000538.19_60120728_60171104_8	chr11	-	1295	11	NNC	ENSMUSG00000000538.19	novel	1264	11	NA	NA	3	43	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTCCCGCCTTCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	60171104	60120727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_60121068_60121926_60121964_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60161143_60161285_60165749_60165829_60171024
ENSMUSG00000000552.11_103223329_103228767_1	chr15	-	804	5	ISM	ENSMUSG00000000552.11	ENST00000551771.5	1107	6	12967	0	3170	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGTCTCTCCTTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	103228767	103223328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103223653_103223787_103223884_103224053_103224224_103226375_103226539_103228716
ENSMUSG00000000552.11_103223329_103228767_2	chr15	-	802	5	NNC	ENSMUSG00000000552.11	novel	1107	6	NA	NA	3170	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGTCTCTCCTTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	103228767	103223328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_103223653_103223787_103223884_103224053_103224224_103226375_103226537_103228716
ENSMUSG00000000552.11_103223517_103241625_1	chr15	-	804	6	NNC	ENSMUSG00000000552.11	novel	1107	6	NA	NA	109	-188	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCAGGGACCACCGATC	NA	NA	NA	NA	NA	NA	NA	NA	103241625	103223516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_103223653_103223787_103223884_103224053_103224224_103226381_103226539_103228716_103228828_103241491
ENSMUSG00000000552.11_103223583_103241625_1	chr15	-	744	6	FSM	ENSMUSG00000000552.11	ENST00000551771.5	1107	6	109	254	109	-254	multi-exon	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCGGTGATGGCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	103241625	103223582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_103223653_103223787_103223884_103224053_103224224_103226375_103226539_103228716_103228828_103241491
ENSMUSG00000000552.11_103224414_103226411_1	chr15	-	174	2	ISM	ENSMUSG00000000552.11	ENSMUST00000229551.2	2221	7	5526	2079	5526	-1085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGGGTAGCAAGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	103226411	103224413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103224552_103226375
ENSMUSG00000000552.11_103224471_103226467_1	chr15	-	173	2	ISM	ENSMUSG00000000552.11	ENSMUST00000229551.2	2221	7	5470	2136	5470	-1142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGGGACAGGGTGTAACC	NA	NA	NA	NA	NA	NA	NA	NA	103226467	103224470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103224552_103226375
ENSMUSG00000000555.9_103253399_103254455_1	chr15	-	458	2	ISM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	20735	686	20735	-686	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACCATAATTAGGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	103254455	103253398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103253780_103254378
ENSMUSG00000000555.9_103253617_103256160_1	chr15	-	451	4	ISM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	19030	904	19030	-904	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTGAGGGCTGGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	103256160	103253616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097
ENSMUSG00000000555.9_103254443_103258118_1	chr15	-	439	5	ISM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	17072	1730	17072	-1730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATCCTAGCCATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	103258118	103254442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038
ENSMUSG00000000555.9_103258145_103259419_1	chr15	-	454	6	ISM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	15771	5432	15771	-5432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTCCACAGGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	103259419	103258144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372
ENSMUSG00000000555.9_103259044_103260056_1	chr15	-	438	5	ISM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	15134	6331	15134	-6331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACACAAAGAAAACCATC	NA	NA	NA	NA	NA	NA	NA	NA	103260056	103259043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967
ENSMUSG00000000555.9_103259400_103260563_1	chr15	-	452	4	ISM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	14627	6687	14627	-6687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCAGGACTTGTCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	103260563	103259399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103259524_103259804_103259873_103259967_103260106_103260441
ENSMUSG00000000555.9_103260076_103261675_1	chr15	-	495	6	ISM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	13515	7363	13515	-7363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTCACATTGCCCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	103261675	103260075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569
ENSMUSG00000000555.9_103261685_103264396_1	chr15	-	440	5	ISM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	10794	8972	10794	-8972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCACTAAACCTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	103264396	103261684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352
ENSMUSG00000000555.9_103262055_103264834_1	chr15	-	446	6	ISM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	10356	9342	10356	-9342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCGGCAGCTCCTTGACA	NA	NA	NA	NA	NA	NA	NA	NA	103264834	103262054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742
ENSMUSG00000000555.9_103262726_103265713_1	chr15	-	444	7	ISM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	9477	10013	9477	-10013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCCCTCTACAACGTCT	NA	NA	NA	NA	NA	NA	NA	NA	103265713	103262725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618
ENSMUSG00000000555.9_103264813_103267541_1	chr15	-	463	6	ISM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	7649	12100	7649	-12100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCAACCCTGTTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	103267541	103264812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476
ENSMUSG00000000555.9_103265661_103274841_1	chr15	-	438	4	ISM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	349	12948	349	-12948	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTCACCCGGATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	103274841	103265660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103265740_103265874_103265988_103267476_103267608_103274726
ENSMUSG00000000560.10_71118404_71253192_1	chr5	-	2563	11	NNC	ENSMUSG00000000560.10	novel	2583	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGAAGAAGAAGGAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	71253192	71118403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_71119442_71125342_71125521_71130767_71130971_71163454_71163603_71165265_71165410_71170043_71170127_71171758_71171980_71192072_71192141_71249314_71249431_71251874_71251946_71252899
ENSMUSG00000000560.10_71118404_71253192_2	chr5	-	2568	11	FSM	ENSMUSG00000000560.10	ENST00000540012.5	2583	11	20	-5	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGAAGAAGAAGGAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	71253192	71118403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_71119442_71125342_71125521_71130767_71130971_71163449_71163603_71165265_71165410_71170043_71170127_71171758_71171980_71192072_71192141_71249314_71249431_71251874_71251946_71252899
ENSMUSG00000000560.10_71118404_71253192_3	chr5	-	2560	11	NNC	ENSMUSG00000000560.10	novel	2583	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGAAGAAGAAGGAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	71253192	71118403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_71119442_71125342_71125521_71130767_71130971_71163449_71163603_71165265_71165410_71170043_71170119_71171758_71171980_71192072_71192141_71249314_71249431_71251874_71251946_71252899
ENSMUSG00000000561.15_105866685_105875207_1	chr3	+	1813	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	0	1869	0	-1869	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCACCCTTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	105866684	105875207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ENSMUSG00000000561.15_105866830_105875354_1	chr3	+	1815	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	145	1722	145	-1722	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCATTTTTCCCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	105866829	105875354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ENSMUSG00000000561.15_105868938_105875721_1	chr3	+	1806	8	ISM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	2253	1355	2253	-1355	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCATGAGCCTCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	105868937	105875721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ENSMUSG00000000561.15_105868938_105875750_1	chr3	+	1835	8	ISM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	2253	1326	2253	-1326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGCAAAACGCTTGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	105868937	105875750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ENSMUSG00000000561.15_105871765_105875935_1	chr3	+	1826	6	ISM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	5080	1141	5080	-1141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGGGGCTAAGACTAAT	NA	NA	NA	NA	NA	NA	NA	NA	105871764	105875935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ENSMUSG00000000561.15_105872433_105876107_1	chr3	+	1843	4	ISM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	5748	969	5748	-969	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGATATACAAGGTAATATA	NA	NA	NA	NA	NA	NA	NA	NA	105872432	105876107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_105872469_105873080_105873190_105873672_105873742_105874478
ENSMUSG00000000563.18_105850018_105861497_1	chr3	-	832	4	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	5918	4	5918	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTTATAAGTTTCATAC	NA	NA	NA	NA	NA	NA	NA	NA	105861497	105850017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333
ENSMUSG00000000563.18_105850214_105866562_1	chr3	-	918	7	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	853	200	853	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1612	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATGATCAAGGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	105866562	105850213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
ENSMUSG00000000563.18_105850214_105866562_2	chr3	-	901	6	NNC	ENSMUSG00000000563.18	novel	1604	8	NA	NA	853	-200	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	819	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATGATCAAGGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	105866562	105850213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866443
ENSMUSG00000000563.18_105850214_105866562_3	chr3	-	907	6	NNC	ENSMUSG00000000563.18	novel	1604	8	NA	NA	853	-200	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1031	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATGATCAAGGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	105866562	105850213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866437
ENSMUSG00000000563.18_105850343_105866622_1	chr3	-	838	6	NNC	ENSMUSG00000000563.18	novel	1604	8	NA	NA	793	-329	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCTTGCAAAGAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	105866622	105850342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866437
ENSMUSG00000000563.18_105851064_105866822_1	chr3	-	951	6	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	593	1050	593	-1050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1902	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAACACATGATAGACT	NA	NA	NA	NA	NA	NA	NA	NA	105866822	105851063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
ENSMUSG00000000563.18_105851103_105866754_1	chr3	-	844	6	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	661	1089	661	-1089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCACATCTCTGTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	105866754	105851102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
ENSMUSG00000000563.18_105858969_105867294_1	chr3	-	875	6	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	121	8955	121	-8955	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGGAGAAGGCACAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	105867294	105858968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463_105866875_105867241
ENSMUSG00000000563.18_105861326_105867415_1	chr3	-	940	5	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	0	11312	0	-11312	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAAACTTTACTTCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	105867415	105861325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105861498_105863211_105863358_105866177_105866215_105866463_105866875_105867241
ENSMUSG00000000579.15_6869070_6875027_1	chr17	+	538	5	FSM	ENSMUSG00000000579.15	ENSMUST00000092966.5	2589	5	0	2051	0	-2051	multi-exon	TRUE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATGTTGGGCAAACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	6869069	6875027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_6869236_6870885_6870928_6874010_6874135_6874472_6874551_6874899
ENSMUSG00000000579.15_6869191_6875100_1	chr17	+	490	5	FSM	ENSMUSG00000000579.15	ENSMUST00000092966.5	2589	5	121	1978	121	-1978	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAACCACATGACTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	6869190	6875100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_6869236_6870885_6870928_6874010_6874135_6874472_6874551_6874899
ENSMUSG00000000579.15_6869191_6875153_1	chr17	+	543	5	FSM	ENSMUSG00000000579.15	ENSMUST00000092966.5	2589	5	121	1925	121	-1925	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTACCACTTGTCTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	6869190	6875153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_6869236_6870885_6870928_6874010_6874135_6874472_6874551_6874899
ENSMUSG00000000579.15_6874009_6875299_1	chr17	+	604	3	ISM	ENSMUSG00000000579.15	ENSMUST00000092966.5	2589	5	4939	1779	4939	-1779	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	6874008	6875299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6874135_6874472_6874551_6874899
ENSMUSG00000000581.9_17207579_17216734_1	chr11	+	554	5	FSM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	-15	2442	-15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTAATCAGTTTACAAT	NA	NA	NA	NA	NA	NA	NA	NA	17207578	17216734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_17207659_17212647_17212795_17213608_17213676_17213950_17214007_17216530
ENSMUSG00000000581.9_17212646_17216734_1	chr11	+	476	4	ISM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	5052	2442	5052	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTAATCAGTTTACAAT	NA	NA	NA	NA	NA	NA	NA	NA	17212645	17216734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_17212795_17213608_17213676_17213950_17214007_17216530
ENSMUSG00000000581.9_17213621_17216948_1	chr11	+	529	3	ISM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	6027	2228	6027	214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTAAACATTTGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	17213620	17216948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_17213676_17213950_17214007_17216530
ENSMUSG00000000594.8_54988941_55003176_1	chr11	+	3448	4	FSM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	0	679	0	-679	multi-exon	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGGTGTCTGATGATTA	NA	NA	NA	NA	NA	NA	NA	NA	54988940	55003176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_54989071_54994412_54994575_54999723_54999907_55000203
ENSMUSG00000000594.8_54999758_55003485_1	chr11	+	3431	2	ISM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	10817	370	10817	-370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGCCTGGGCTATAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	54999757	55003485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_54999907_55000203
ENSMUSG00000000594.8_54999816_55003548_1	chr11	+	3436	2	ISM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	10875	307	10875	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAGATGCTCTTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	54999815	55003548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_54999907_55000203
ENSMUSG00000000600.16_3882048_3891359_1	chr5	+	782	3	ISM	ENSMUSG00000000600.16	ENSMUST00000080085.9	2930	17	28864	0	28643	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTATTTAAACCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	3882047	3891359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_3882227_3886777_3886895_3890873
ENSMUSG00000000605.10_7286079_7292094_1	chr7	-	1633	3	ISM	ENSMUSG00000000605.10	ENST00000421085.7	3511	11	7786	86	7786	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAGGATATAAAATGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	7292094	7286078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_7287274_7290644_7290862_7291873
ENSMUSG00000000605.10_7286139_7292151_1	chr7	-	1630	3	ISM	ENSMUSG00000000605.10	ENST00000421085.7	3511	11	7729	146	7729	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCCAAATGGATTACAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	7292151	7286138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_7287274_7290644_7290862_7291873
ENSMUSG00000000605.10_7286200_7292212_1	chr7	-	1630	3	ISM	ENSMUSG00000000605.10	ENST00000421085.7	3511	11	7668	207	7668	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGTCTTCCAGATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	7292212	7286199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_7287274_7290644_7290862_7291873
ENSMUSG00000000605.10_7286343_7293481_1	chr7	-	1631	4	ISM	ENSMUSG00000000605.10	ENST00000421085.7	3511	11	6399	350	6399	-350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCATTTGACGTATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	7293481	7286342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397
ENSMUSG00000000605.10_7286452_7293584_1	chr7	-	1625	4	ISM	ENSMUSG00000000605.10	ENST00000421085.7	3511	11	6296	459	6296	-459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGACATTTCTCTTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	7293584	7286451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397
ENSMUSG00000000605.10_7287054_7294917_1	chr7	-	1531	5	ISM	ENSMUSG00000000605.10	ENST00000421085.7	3511	11	4963	1061	4963	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAGAAAGCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	7294917	7287053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409
ENSMUSG00000000605.10_7287101_7296962_1	chr7	-	1652	7	ISM	ENSMUSG00000000605.10	ENST00000421085.7	3511	11	2918	1108	2918	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAACTTGCACTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	7296962	7287100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913
ENSMUSG00000000605.10_7287101_7297001_1	chr7	-	1691	7	ISM	ENSMUSG00000000605.10	ENST00000421085.7	3511	11	2879	1108	2879	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAACTTGCACTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	7297001	7287100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913
ENSMUSG00000000605.10_7287216_7297064_1	chr7	-	1639	7	ISM	ENSMUSG00000000605.10	ENST00000421085.7	3511	11	2816	1223	2816	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGGACCCTGAATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	7297064	7287215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913
ENSMUSG00000000605.10_7290784_7298045_1	chr7	-	1696	8	ISM	ENSMUSG00000000605.10	ENST00000421085.7	3511	11	1835	4791	1835	-3683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGCCCACATCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	7298045	7290783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297970
ENSMUSG00000000605.10_7292120_7299027_1	chr7	-	1544	8	ISM	ENSMUSG00000000605.10	ENSMUST00000210594.2	2539	12	3234	5019	853	-5019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAATGGGTACCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	7299027	7292119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968
ENSMUSG00000000605.10_7292183_7299843_1	chr7	-	1667	9	ISM	ENSMUSG00000000605.10	ENST00000421085.7	3511	11	37	6190	37	-5082	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCACCAGCAAGTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	7299843	7292182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297970_7298183_7298968_7299069_7299722
ENSMUSG00000000605.10_7292233_7299865_1	chr7	-	1639	9	ISM	ENSMUSG00000000605.10	ENST00000421085.7	3511	11	15	6240	15	-5132	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACTGACTGGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	7299865	7292232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297970_7298183_7298968_7299069_7299722
ENSMUSG00000000617.15_50742159_50753900_1	chr11	+	2013	9	ISM	ENSMUSG00000000617.15	ENSMUST00000000631.8	4291	10	346	3104	170	-1587	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCAAGTGTGACATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	50742158	50753900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50742455_50744016_50744234_50744791_50744928_50746510_50746666_50747783_50747925_50748026_50748228_50750083_50750230_50750320_50750945_50753803
ENSMUSG00000000617.15_50742159_50753953_1	chr11	+	2066	9	ISM	ENSMUSG00000000617.15	ENSMUST00000000631.8	4291	10	346	3051	170	-1534	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCTCATGGTCACGTG	NA	NA	NA	NA	NA	NA	NA	NA	50742158	50753953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50742455_50744016_50744234_50744791_50744928_50746510_50746666_50747783_50747925_50748026_50748228_50750083_50750230_50750320_50750945_50753803
ENSMUSG00000000617.15_50742159_50754014_1	chr11	+	2127	9	ISM	ENSMUSG00000000617.15	ENSMUST00000000631.8	4291	10	346	2990	170	-1473	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGAAGCCAAGCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	50742158	50754014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50742455_50744016_50744234_50744791_50744928_50746510_50746666_50747783_50747925_50748026_50748228_50750083_50750230_50750320_50750945_50753803
ENSMUSG00000000617.15_50742306_50755320_1	chr11	+	2114	10	FSM	ENSMUSG00000000617.15	ENSMUST00000000631.8	4291	10	493	1684	317	-167	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCCTGAGCGCGTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	50742305	50755320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_50742455_50744016_50744234_50744791_50744928_50746510_50746666_50747783_50747925_50748026_50748228_50750083_50750230_50750320_50750945_50753803_50754116_50755287
ENSMUSG00000000617.15_50742386_50755358_1	chr11	+	2072	10	FSM	ENSMUSG00000000617.15	ENSMUST00000000631.8	4291	10	573	1646	397	-129	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCCCAAAACCTACGTCA	NA	NA	NA	NA	NA	NA	NA	NA	50742385	50755358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_50742455_50744016_50744234_50744791_50744928_50746510_50746666_50747783_50747925_50748026_50748228_50750083_50750230_50750320_50750945_50753803_50754116_50755287
ENSMUSG00000000617.15_50742433_50755428_1	chr11	+	2095	10	FSM	ENSMUSG00000000617.15	ENSMUST00000000631.8	4291	10	620	1576	444	-59	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCTCCACGATGGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	50742432	50755428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_50742455_50744016_50744234_50744791_50744928_50746510_50746666_50747783_50747925_50748026_50748228_50750083_50750230_50750320_50750945_50753803_50754116_50755287
ENSMUSG00000000617.15_50744077_50755488_1	chr11	+	2068	9	NNC	ENSMUSG00000000617.15	novel	2598	10	NA	NA	2088	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGAGTGTGGGTGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	50744076	50755488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_50744234_50744791_50744928_50746510_50746666_50747783_50747925_50748031_50748228_50750083_50750230_50750320_50750949_50753807_50754116_50755287
ENSMUSG00000000627.16_82890531_82894316_1	chr6	-	628	3	ISM	ENSMUSG00000000627.16	ENST00000339773.9	2162	10	22383	257	22383	-257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCACATCCGGCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	82894316	82890530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_82891086_82891347_82891407_82894302
ENSMUSG00000000627.16_82890579_82894377_1	chr6	-	641	3	ISM	ENSMUSG00000000627.16	ENST00000339773.9	2162	10	22322	305	22322	-305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTGGCTTCCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	82894377	82890578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_82891086_82891347_82891407_82894302
ENSMUSG00000000627.16_82890694_82894594_1	chr6	-	637	4	ISM	ENSMUSG00000000627.16	ENST00000339773.9	2162	10	22105	420	22105	-420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCTTAGATCTGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	82894594	82890693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_82891086_82891347_82891407_82894302_82894464_82894569
ENSMUSG00000000627.16_82890752_82894643_1	chr6	-	628	4	ISM	ENSMUSG00000000627.16	ENST00000339773.9	2162	10	22056	478	22056	-478	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGGTCGCCGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	82894643	82890751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_82891086_82891347_82891407_82894302_82894464_82894569
ENSMUSG00000000627.16_82890906_82894908_1	chr6	-	615	5	ISM	ENSMUSG00000000627.16	ENST00000339773.9	2162	10	21791	632	21791	-632	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTGTCAGGAGGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	82894908	82890905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_82891086_82891347_82891407_82894302_82894464_82894569_82894680_82894803
ENSMUSG00000000627.16_82891348_82895312_1	chr6	-	701	5	ISM	ENSMUSG00000000627.16	ENST00000339773.9	2162	10	21387	1074	21387	-1074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTATGGCTCAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	82895312	82891347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_82891407_82894302_82894464_82894569_82894680_82894803_82895027_82895164
ENSMUSG00000000627.16_82894344_82895530_1	chr6	-	619	5	ISM	ENSMUSG00000000627.16	ENST00000339773.9	2162	10	21169	4070	21169	-4070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCGATGCTTGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	82895530	82894343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_82894464_82894569_82894680_82894803_82895027_82895164_82895313_82895512
ENSMUSG00000000627.16_82894392_82895585_1	chr6	-	626	5	ISM	ENSMUSG00000000627.16	ENST00000339773.9	2162	10	21114	4118	21114	-4118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCAGAATGTATCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	82895585	82894391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_82894464_82894569_82894680_82894803_82895027_82895164_82895313_82895512
ENSMUSG00000000627.16_82894435_82895644_1	chr6	-	642	5	ISM	ENSMUSG00000000627.16	ENST00000339773.9	2162	10	21055	4161	21055	-4161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGACACAAGTGAACACCA	NA	NA	NA	NA	NA	NA	NA	NA	82895644	82894434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_82894464_82894569_82894680_82894803_82895027_82895164_82895313_82895512
ENSMUSG00000000627.16_82894847_82914102_1	chr6	-	628	5	ISM	ENSMUSG00000000627.16	ENST00000339773.9	2162	10	2597	4573	2597	-4573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCTCTCAGGGAAAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	82914102	82894846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_82895027_82895164_82895313_82895512_82895692_82912875_82912936_82914041
ENSMUSG00000000627.16_82894894_82914163_1	chr6	-	642	5	ISM	ENSMUSG00000000627.16	ENST00000339773.9	2162	10	2536	4620	2536	-4620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTACGGATACAGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	82914163	82894893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_82895027_82895164_82895313_82895512_82895692_82912875_82912936_82914041
ENSMUSG00000000627.16_82895165_82916526_1	chr6	-	624	5	ISM	ENSMUSG00000000627.16	ENST00000339773.9	2162	10	173	4891	173	-4891	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGGGGGTGGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	82916526	82895164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_82895313_82895512_82895692_82912875_82912936_82914041_82914194_82916441
ENSMUSG00000000632.14_77821743_77859913_1	chr11	+	1374	5	ISM	ENSMUSG00000000632.14	ENSMUST00000000646.14	3964	16	-95	9953	-95	-9953	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGGTCCCCACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	77821742	77859913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77821941_77844233_77844894_77845575_77845710_77853680_77853877_77859727
ENSMUSG00000000632.14_77821865_77863842_1	chr11	+	1421	6	ISM	ENSMUSG00000000632.14	ENSMUST00000000646.14	3964	16	27	6024	27	-6024	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGAGCTGTCCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	77821864	77863842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77821941_77844233_77844894_77845575_77845710_77853680_77853877_77859727_77859914_77863673
ENSMUSG00000000632.14_77844333_77864054_1	chr11	+	1381	6	ISM	ENSMUSG00000000632.14	ENSMUST00000000646.14	3964	16	22495	5812	22495	-5812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCTGCAGGCATGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	77844332	77864054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77844894_77845575_77845710_77853680_77853877_77859727_77859914_77863673_77863843_77863919
ENSMUSG00000000632.14_77844528_77864760_1	chr11	+	1370	7	ISM	ENSMUSG00000000632.14	ENSMUST00000000646.14	3964	16	22690	5106	22690	-5106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCACGACCCCCAGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	77844527	77864760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77844894_77845575_77845710_77853680_77853877_77859727_77859914_77863673_77863843_77863919_77864087_77864608
ENSMUSG00000000632.14_77844679_77865314_1	chr11	+	1450	9	ISM	ENSMUSG00000000632.14	ENSMUST00000000646.14	3964	16	22841	4552	22841	-4552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACAGCCCGGGTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	77844678	77865314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77844894_77845575_77845710_77853680_77853877_77859727_77859914_77863673_77863843_77863919_77864087_77864608_77864804_77865016_77865156_77865265
ENSMUSG00000000632.14_77845572_77865997_1	chr11	+	1413	9	ISM	ENSMUSG00000000632.14	ENSMUST00000000646.14	3964	16	23734	3869	23734	-3869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTACCCGAGATCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	77845571	77865997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77845710_77853680_77853877_77859727_77859914_77863673_77863843_77863919_77864087_77864608_77864804_77865016_77865156_77865265_77865463_77865971
ENSMUSG00000000632.14_77845648_77866037_1	chr11	+	1377	9	ISM	ENSMUSG00000000632.14	ENSMUST00000000646.14	3964	16	23810	3829	23810	-3829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGCTGGTGCACGGC	NA	NA	NA	NA	NA	NA	NA	NA	77845647	77866037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77845710_77853680_77853877_77859727_77859914_77863673_77863843_77863919_77864087_77864608_77864804_77865016_77865156_77865265_77865463_77865971
ENSMUSG00000000632.14_77845696_77866118_1	chr11	+	1410	9	ISM	ENSMUSG00000000632.14	ENSMUST00000000646.14	3964	16	23858	3748	23858	-3748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGGGACCTAAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	77845695	77866118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77845710_77853680_77853877_77859727_77859914_77863673_77863843_77863919_77864087_77864608_77864804_77865016_77865156_77865265_77865463_77865971
ENSMUSG00000000632.14_77853784_77867358_1	chr11	+	1402	9	ISM	ENSMUSG00000000632.14	ENSMUST00000000646.14	3964	16	31946	2508	31946	-2508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCCGTGGGAGCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	77853783	77867358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77853877_77859727_77859914_77863673_77863843_77863919_77864087_77864608_77864804_77865016_77865156_77865265_77865463_77865971_77866167_77867297
ENSMUSG00000000632.14_77853857_77867388_1	chr11	+	1359	9	ISM	ENSMUSG00000000632.14	ENSMUST00000000646.14	3964	16	32019	2478	32019	-2478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGACCAGGGTTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	77853856	77867388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77853877_77859727_77859914_77863673_77863843_77863919_77864087_77864608_77864804_77865016_77865156_77865265_77865463_77865971_77866167_77867297
ENSMUSG00000000632.14_77859726_77867489_1	chr11	+	1442	8	ISM	ENSMUSG00000000632.14	ENSMUST00000000646.14	3964	16	37888	2377	37888	-2377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTACAGTGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	77859725	77867489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77859914_77863673_77863843_77863919_77864087_77864608_77864804_77865016_77865156_77865265_77865463_77865971_77866167_77867297
ENSMUSG00000000632.14_77859837_77867635_1	chr11	+	1397	9	ISM	ENSMUSG00000000632.14	ENSMUST00000000646.14	3964	16	37999	2231	37999	-2231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCACCCAGCAGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	77859836	77867635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77859914_77863673_77863843_77863919_77864087_77864608_77864804_77865016_77865156_77865265_77865463_77865971_77866167_77867297_77867490_77867569
ENSMUSG00000000632.14_77863673_77867767_1	chr11	+	1453	8	ISM	ENSMUSG00000000632.14	ENSMUST00000000646.14	3964	16	41835	2099	41835	-2099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCTACCTACCACTC	NA	NA	NA	NA	NA	NA	NA	NA	77863672	77867767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77863843_77863919_77864087_77864608_77864804_77865016_77865156_77865265_77865463_77865971_77866167_77867297_77867490_77867569
ENSMUSG00000000632.14_77863999_77868615_1	chr11	+	1409	10	ISM	ENSMUSG00000000632.14	ENST00000360295.13	4223	17	42373	1259	42161	-1251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAACCGCATCACGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	77863998	77868615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77864087_77864608_77864804_77865016_77865156_77865265_77865463_77865971_77866167_77867297_77867490_77867569_77867768_77868070_77868110_77868362_77868481_77868567
ENSMUSG00000000632.14_77864608_77868887_1	chr11	+	1410	10	ISM	ENSMUSG00000000632.14	ENST00000360295.13	4223	17	42982	987	42770	-979	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAGCCTGGGGATGCAC	NA	NA	NA	NA	NA	NA	NA	NA	77864607	77868887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77864804_77865016_77865156_77865265_77865463_77865971_77866167_77867297_77867490_77867569_77867768_77868070_77868110_77868362_77868481_77868567_77868671_77868854
ENSMUSG00000000632.14_77865015_77869022_1	chr11	+	1351	9	ISM	ENSMUSG00000000632.14	ENST00000360295.13	4223	17	43389	852	43177	-844	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGACCTATTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	77865014	77869022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77865156_77865265_77865463_77865971_77866167_77867297_77867490_77867569_77867768_77868070_77868110_77868362_77868481_77868567_77868671_77868854
ENSMUSG00000000632.14_77865064_77869076_1	chr11	+	1356	9	ISM	ENSMUSG00000000632.14	ENST00000360295.13	4223	17	43438	798	43226	-790	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGGGCATCTGCCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	77865063	77869076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77865156_77865265_77865463_77865971_77866167_77867297_77867490_77867569_77867768_77868070_77868110_77868362_77868481_77868567_77868671_77868854
ENSMUSG00000000632.14_77865102_77869139_1	chr11	+	1381	9	ISM	ENSMUSG00000000632.14	ENST00000360295.13	4223	17	43476	735	43264	-727	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCTCTTTTGCCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	77865101	77869139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77865156_77865265_77865463_77865971_77866167_77867297_77867490_77867569_77867768_77868070_77868110_77868362_77868481_77868567_77868671_77868854
ENSMUSG00000000632.14_77865368_77869290_1	chr11	+	1376	8	ISM	ENSMUSG00000000632.14	ENST00000360295.13	4223	17	43742	584	43530	-576	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCCAAAATTGTTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	77865367	77869290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77865463_77865971_77866167_77867297_77867490_77867569_77867768_77868070_77868110_77868362_77868481_77868567_77868671_77868854
ENSMUSG00000000632.14_77865415_77869347_1	chr11	+	1386	8	ISM	ENSMUSG00000000632.14	ENST00000360295.13	4223	17	43789	527	43577	-519	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCAGGGAGGTTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	77865414	77869347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77865463_77865971_77866167_77867297_77867490_77867569_77867768_77868070_77868110_77868362_77868481_77868567_77868671_77868854
ENSMUSG00000000632.14_77866074_77869492_1	chr11	+	1381	7	ISM	ENSMUSG00000000632.14	ENST00000360295.13	4223	17	44448	382	44236	-374	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCACGCTCCACACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	77866073	77869492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77866167_77867297_77867490_77867569_77867768_77868070_77868110_77868362_77868481_77868567_77868671_77868854
ENSMUSG00000000632.14_77867296_77869612_1	chr11	+	1410	6	ISM	ENSMUSG00000000632.14	ENST00000360295.13	4223	17	45670	262	45458	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCCTCTGAGCCACTTA	NA	NA	NA	NA	NA	NA	NA	NA	77867295	77869612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77867490_77867569_77867768_77868070_77868110_77868362_77868481_77868567_77868671_77868854
ENSMUSG00000000632.14_77867679_77869874_1	chr11	+	1369	5	ISM	ENSMUSG00000000632.14	ENST00000360295.13	4223	17	46053	0	45841	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCAGTGTGAATGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	77867678	77869874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77867768_77868070_77868110_77868362_77868481_77868567_77868671_77868854
ENSMUSG00000000693.11_83012468_83028298_1	chr6	+	2262	11	NNC	ENSMUSG00000000693.11	novel	2277	11	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGGAGCCCAGGACTGAT	NA	NA	NA	NA	NA	NA	NA	NA	83012467	83028298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_83012779_83014409_83014574_83025558_83025740_83025849_83026005_83026164_83026333_83026464_83026628_83026754_83026992_83027096_83027213_83027288_83027426_83027538_83027651_83027780
ENSMUSG00000000693.11_83012468_83028298_2	chr6	+	2269	11	FSM	ENSMUSG00000000693.11	ENST00000393937.6	2277	11	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGGAGCCCAGGACTGAT	NA	NA	NA	NA	NA	NA	NA	NA	83012467	83028298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_83012779_83014409_83014574_83025558_83025740_83025849_83026005_83026164_83026333_83026464_83026628_83026754_83026999_83027096_83027213_83027288_83027426_83027538_83027651_83027780
ENSMUSG00000000693.11_83015484_83025054_1	chr6	+	193	2	ISM	ENSMUSG00000000693.11	ENSMUST00000000707.9	4098	14	4330	4489	3024	-2599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTTCTATCGTGCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	83015483	83025054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83015591_83024968
ENSMUSG00000000706.17_23642728_23648481_2	chr13	-	1359	4	ISM	ENSMUSG00000000706.17	ENST00000244513.10	1709	5	872	0	872	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGCAGGAAGAAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	23648481	23642727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_23643565_23644624_23644785_23645655_23645938_23648401
ENSMUSG00000000706.17_23642728_23648611_1	chr13	-	1489	4	ISM	ENSMUSG00000000706.17	ENST00000244513.10	1709	5	742	0	742	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGCAGGAAGAAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	23648611	23642727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_23643565_23644624_23644785_23645655_23645938_23648401
ENSMUSG00000000706.17_23642878_23649307_1	chr13	-	1513	5	FSM	ENSMUSG00000000706.17	ENST00000244513.10	1709	5	46	150	46	-150	multi-exon	FALSE	canonical	NA	NA	NA	NA	1576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAACAAATATTCCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	23649307	23642877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_23643565_23644624_23644785_23645655_23645938_23648401_23648750_23649271
ENSMUSG00000000706.17_23642989_23649317_1	chr13	-	1412	5	FSM	ENSMUSG00000000706.17	ENST00000244513.10	1709	5	36	261	36	-261	multi-exon	FALSE	canonical	NA	NA	NA	NA	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGTCCAGGACGACATT	NA	NA	NA	NA	NA	NA	NA	NA	23649317	23642988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_23643565_23644624_23644785_23645655_23645938_23648401_23648750_23649271
ENSMUSG00000000711.4_128515399_128518815_1	chr10	-	333	3	ISM	ENSMUSG00000000711.4	ENST00000628569.1	496	4	3964	0	3964	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTGGCTCGAAGCAAATA	NA	NA	NA	NA	NA	NA	NA	NA	128518815	128515398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128515515_128517254_128517349_128518692
ENSMUSG00000000711.4_128515399_128518817_1	chr10	-	330	3	NNC	ENSMUSG00000000711.4	novel	496	4	NA	NA	3962	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2052	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTGGCTCGAAGCAAATA	NA	NA	NA	NA	NA	NA	NA	NA	128518817	128515398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_128515510_128517254_128517349_128518692
ENSMUSG00000000711.4_128515478_128522652_1	chr10	-	290	4	FSM	ENSMUSG00000000711.4	ENST00000628569.1	496	4	127	79	127	-79	multi-exon	FALSE	canonical	NA	NA	NA	NA	2013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGCGGCAGGCCGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	128522652	128515477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128515515_128517254_128517349_128518692_128518816_128522616
ENSMUSG00000000711.4_128517255_128522686_1	chr10	-	287	3	ISM	ENSMUSG00000000711.4	ENST00000628569.1	496	4	93	1856	93	-1856	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGTCAGAGTGGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	128522686	128517254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128517349_128518692_128518816_128522616
ENSMUSG00000000731.16_77866117_77871562_1	chr10	-	411	5	NIC	ENSMUSG00000000731.16	novel	1593	14	NA	NA	7775	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGCCCGCTGGCCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	77871562	77866116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_-_77866159_77867654_77867724_77870214_77870324_77870419_77870535_77871486
ENSMUSG00000000731.16_77867689_77871668_1	chr10	-	441	4	NIC	ENSMUSG00000000731.16	novel	1593	14	NA	NA	7669	-1572	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGGGACGACCTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	77871668	77867688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_-_77867724_77870214_77870324_77870419_77870535_77871486
ENSMUSG00000000731.16_77871540_77875777_1	chr10	-	438	5	ISM	ENSMUSG00000000731.16	ENST00000291582.6	1593	14	3560	5423	3560	-5423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCAGCACTGTGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	77875777	77871539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77871668_77872518_77872619_77873706_77873823_77875495_77875577_77875764
ENSMUSG00000000731.16_77871613_77875828_1	chr10	-	416	5	ISM	ENSMUSG00000000731.16	ENST00000291582.6	1593	14	3509	5496	3509	-5496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCCAGCTCTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	77875828	77871612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77871668_77872518_77872619_77873706_77873823_77875495_77875577_77875764
ENSMUSG00000000731.16_77872596_77877382_1	chr10	-	418	5	ISM	ENSMUSG00000000731.16	ENST00000291582.6	1593	14	1955	6479	1955	-6479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCCAGGGCAGAGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	77877382	77872595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77872619_77873706_77873823_77875495_77875577_77875764_77875914_77877333
ENSMUSG00000000731.16_77873782_77877945_1	chr10	-	436	5	ISM	ENSMUSG00000000731.16	ENST00000291582.6	1593	14	1392	7665	1392	-7665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATCTGTTGTGACGGCT	NA	NA	NA	NA	NA	NA	NA	NA	77877945	77873781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77873823_77875495_77875577_77875764_77875914_77877333_77877448_77877894
ENSMUSG00000000731.16_77877900_77879274_1	chr10	-	453	4	ISM	ENSMUSG00000000731.16	ENST00000291582.6	1593	14	63	11783	63	-11783	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGGTGAGTTAGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	77879274	77877899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77877970_77878350_77878507_77878735_77878911_77879222
ENSMUSG00000000738.19_123792022_123800688_1	chr8	+	821	4	ISM	ENSMUSG00000000738.19	ENSMUST00000149248.9	2896	17	104	23811	0	3259	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTATCTGCATCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	123792021	123800688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487
ENSMUSG00000000738.19_123792363_123804624_1	chr8	+	729	6	ISM	ENSMUSG00000000738.19	ENSMUST00000153285.9	2481	16	148	19868	148	7195	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGACCGGAAGGGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	123792362	123804624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556
ENSMUSG00000000738.19_123793214_123824499_1	chr8	+	2363	16	ISM	ENSMUSG00000000738.19	ENSMUST00000149248.9	2896	17	1296	0	999	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCCATGTGTATTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	123793213	123824499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ENSMUSG00000000738.19_123793225_123824492_1	chr8	+	2345	16	ISM	ENSMUSG00000000738.19	ENSMUST00000149248.9	2896	17	1307	7	1010	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGCTCTCCATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	123793224	123824492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ENSMUSG00000000738.19_123797117_123824282_1	chr8	+	1581	12	FSM	ENSMUSG00000000738.19	ENST00000645897.1	1590	12	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGCTCCCTAGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	123797116	123824282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ENSMUSG00000000738.19_123797117_123824282_2	chr8	+	1573	12	NNC	ENSMUSG00000000738.19	novel	1590	12	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGCTCCCTAGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	123797116	123824282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821220_123821380_123821896_123821975_123824132
ENSMUSG00000000738.19_123797117_123824282_3	chr8	+	1576	12	NNC	ENSMUSG00000000738.19	novel	1590	12	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGCTCCCTAGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	123797116	123824282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_123797205_123800492_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ENSMUSG00000000738.19_123797117_123824282_4	chr8	+	1580	12	NNC	ENSMUSG00000000738.19	novel	1590	12	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	749	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGCTCCCTAGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	123797116	123824282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824133
ENSMUSG00000000738.19_123797117_123824282_5	chr8	+	1576	12	NNC	ENSMUSG00000000738.19	novel	1590	12	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGCTCCCTAGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	123797116	123824282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123815688_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ENSMUSG00000000738.19_123797117_123824282_6	chr8	+	2022	15	FSM	ENSMUSG00000000738.19	ENST00000268704.7	2031	15	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGCTCCCTAGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	123797116	123824282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806728_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ENSMUSG00000000740.13_123829089_123831799_1	chr8	+	596	6	FSM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	0	184	0	-184	multi-exon	FALSE	canonical	NA	NA	NA	NA	6055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAGAGTTATCACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	123829088	123831799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
ENSMUSG00000000740.13_123829392_123831970_1	chr8	+	659	5	NNC	ENSMUSG00000000740.13	novel	780	6	NA	NA	303	-13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8951	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATAAAGCAAAAGCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	123829391	123831970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831794
ENSMUSG00000000740.13_123829392_123831970_2	chr8	+	664	5	NNC	ENSMUSG00000000740.13	novel	780	6	NA	NA	303	-13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATAAAGCAAAAGCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	123829391	123831970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_123829502_123829590_123829726_123829921_123830096_123830636_123830694_123831782
ENSMUSG00000000740.13_123829392_123831970_3	chr8	+	666	5	NNC	ENSMUSG00000000740.13	novel	780	6	NA	NA	303	-13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATAAAGCAAAAGCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	123829391	123831970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_123829502_123829583_123829726_123829921_123830091_123830636_123830694_123831782
ENSMUSG00000000740.13_123829392_123831970_4	chr8	+	671	5	ISM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	303	13	303	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATAAAGCAAAAGCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	123829391	123831970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
ENSMUSG00000000743.10_123931440_123932987_1	chr8	-	1151	2	ISM	ENSMUSG00000000743.10	ENSMUST00000000759.9	2140	7	6512	437	3988	-437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGACTTTGTTCTTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	123932987	123931439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123932486_123932882
ENSMUSG00000000743.10_123931590_123934250_1	chr8	-	1123	3	ISM	ENSMUSG00000000743.10	ENSMUST00000000759.9	2140	7	5249	587	2725	-587	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTGAGTCAGTCACATC	NA	NA	NA	NA	NA	NA	NA	NA	123934250	123931589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123932486_123932882_123933071_123934211
ENSMUSG00000000743.10_123931638_123934304_1	chr8	-	1129	3	ISM	ENSMUSG00000000743.10	ENSMUST00000000759.9	2140	7	5195	635	2671	-635	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTTCAGCCTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	123934304	123931637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123932486_123932882_123933071_123934211
ENSMUSG00000000743.10_123931877_123935823_1	chr8	-	1137	5	ISM	ENSMUSG00000000743.10	ENSMUST00000000759.9	2140	7	3676	874	1152	-874	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTCTCTCAGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	123935823	123931876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759
ENSMUSG00000000743.10_123931978_123939499_1	chr8	-	1165	7	FSM	ENSMUSG00000000743.10	ENSMUST00000000759.9	2140	7	0	975	0	903	multi-exon	FALSE	canonical	NA	NA	NA	NA	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAACACTGACCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	123939499	123931977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935838_123936954_123936975_123939404
ENSMUSG00000000743.10_123931994_123939499_1	chr8	-	1154	6	NNC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	0	887	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGGTGTCCAGTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	123939499	123931993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935838_123939379
ENSMUSG00000000743.10_123932880_123935839_1	chr8	-	400	3	ISM	ENSMUSG00000000743.10	ENST00000675778.1	418	4	1136	-1	1136	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTCTGTGGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	123935839	123932879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123933071_123934211_123934341_123935759
ENSMUSG00000000743.10_123932880_123935839_2	chr8	-	395	3	NNC	ENSMUSG00000000743.10	novel	418	4	NA	NA	1136	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTCTGTGGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	123935839	123932879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_123933062_123934207_123934341_123935759
ENSMUSG00000000743.10_123932880_123935839_3	chr8	-	398	3	NNC	ENSMUSG00000000743.10	novel	418	4	NA	NA	1136	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTCTGTGGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	123935839	123932879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_123933071_123934213_123934341_123935759
ENSMUSG00000000743.10_123932880_123936986_1	chr8	-	430	4	FSM	ENSMUSG00000000743.10	ENST00000675778.1	418	4	-11	-1	-11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTCTGTGGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	123936986	123932879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_123933071_123934211_123934341_123935759_123935838_123936954
ENSMUSG00000000743.10_123932946_123934250_1	chr8	-	181	2	ISM	ENSMUSG00000000743.10	ENST00000535997.7	582	5	2725	65	2725	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGAGCGTCTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	123934250	123932945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123933088_123934211
ENSMUSG00000000743.10_123932979_123934811_1	chr8	-	303	3	ISM	ENSMUSG00000000743.10	ENST00000550102.5	538	5	2164	98	2164	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAGGTCCTAGACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	123934811	123932978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123933071_123934211_123934341_123934729
ENSMUSG00000000743.10_123933004_123934294_1	chr8	-	167	2	ISM	ENSMUSG00000000743.10	ENST00000535997.7	582	5	2681	123	2681	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCCAGATAGCTGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	123934294	123933003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123933088_123934211
ENSMUSG00000000743.10_123933039_123935776_1	chr8	-	298	4	ISM	ENSMUSG00000000743.10	ENST00000550102.5	538	5	1199	158	1199	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACCACGCCTCAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	123935776	123933038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123933071_123934211_123934341_123934729_123934850_123935759
ENSMUSG00000000743.10_123933058_123934341_1	chr8	-	160	2	ISM	ENSMUSG00000000743.10	ENST00000535997.7	582	5	2634	177	2634	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGAGCTCTGCCACCACG	NA	NA	NA	NA	NA	NA	NA	NA	123934341	123933057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123933088_123934211
ENSMUSG00000000751.14_75191819_75196951_1	chr11	-	516	3	ISM	ENSMUSG00000000751.14	ENSMUST00000000767.6	2942	18	42185	643	42185	-643	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGATAATGAGGCAAATT	NA	NA	NA	NA	NA	NA	NA	NA	75196951	75191818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75192230_75193493_75193581_75196933
ENSMUSG00000000751.14_75191929_75198032_1	chr11	-	588	4	ISM	ENSMUSG00000000751.14	ENSMUST00000000767.6	2942	18	41104	753	41104	-753	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCGGTAGTGTGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	75198032	75191928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940
ENSMUSG00000000751.14_75192015_75198070_1	chr11	-	540	4	ISM	ENSMUSG00000000751.14	ENSMUST00000000767.6	2942	18	41066	839	41066	-839	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATCTGGGCCCCTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	75198070	75192014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940
ENSMUSG00000000751.14_75192131_75231224_1	chr11	-	1772	15	ISM	ENSMUSG00000000751.14	ENSMUST00000000767.6	2942	18	7912	955	7912	-955	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGCAAGTACCACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	75231224	75192130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75230538_75230602_75231115
ENSMUSG00000000751.14_75205719_75231902_1	chr11	-	523	6	ISM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	7248	16727	7234	-14543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACAAAAGTCAGATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	75231902	75205718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853
ENSMUSG00000000751.14_75207028_75239119_1	chr11	-	552	7	ISM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	31	18036	17	-15852	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGGAAAACCTGCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	75239119	75207027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ENSMUSG00000000753.16_75300890_75301825_1	chr11	-	496	2	ISM	ENSMUSG00000000753.16	ENST00000254722.9	1250	7	6992	-80	6992	80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTAGCCTCTGCAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	75301825	75300889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75301220_75301659
ENSMUSG00000000753.16_75301194_75306428_1	chr11	-	612	5	ISM	ENSMUSG00000000753.16	ENST00000254722.9	1250	7	2389	224	2389	-224	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCAGCAAGATTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	75306428	75301193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75301220_75301659_75301871_75304732_75304876_75305746_75305951_75306400
ENSMUSG00000000753.16_75301747_75306556_1	chr11	-	627	4	ISM	ENSMUSG00000000753.16	ENST00000254722.9	1250	7	2261	777	2261	-777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAAGACTATCCAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	75306556	75301746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75301871_75304732_75304876_75305746_75305951_75306400
ENSMUSG00000000753.16_75301807_75307141_1	chr11	-	653	5	ISM	ENSMUSG00000000753.16	ENST00000254722.9	1250	7	1676	837	1676	-837	internal_fragment	TRUE	canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTTGACCATGATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	75307141	75301806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75301871_75304732_75304876_75305746_75305951_75306400_75306557_75307055
ENSMUSG00000000753.16_75305896_75313383_1	chr11	-	560	5	ISM	ENSMUSG00000000753.16	ENSMUST00000000769.14	1832	8	144	5301	-5	400	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCGGATCCTCACGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	75313383	75305895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75305951_75306400_75306557_75307055_75307255_75308734_75308823_75313321
ENSMUSG00000000753.16_75305934_75313455_1	chr11	-	594	5	ISM	ENSMUSG00000000753.16	ENSMUST00000000769.14	1832	8	72	5339	72	362	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTGCCCCTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	75313455	75305933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75305951_75306400_75306557_75307055_75307255_75308734_75308823_75313321
ENSMUSG00000000759.15_12664548_12671896_1	chr8	-	964	3	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	50352	271	50352	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCAGGCCGCTGGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	12671896	12664547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_12665297_12666021_12666139_12671798
ENSMUSG00000000759.15_12664688_12674911_1	chr8	-	961	4	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	47337	411	47337	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCCACGCGTCATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	12674911	12664687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817
ENSMUSG00000000759.15_12664848_12682295_1	chr8	-	986	6	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	39953	571	39953	-571	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCATAAATTAAGAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	12682295	12664847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237
ENSMUSG00000000759.15_12664909_12682341_1	chr8	-	971	6	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	39907	632	39907	-632	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCACCGTGTAATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	12682341	12664908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237
ENSMUSG00000000759.15_12665167_12689596_1	chr8	-	1021	9	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	32652	890	32652	-890	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGGGCGGCGCAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	12689596	12665166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525
ENSMUSG00000000759.15_12671799_12691137_1	chr8	-	1043	9	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	31111	7522	31111	-7522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTTTTTAACTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	12691137	12671798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096
ENSMUSG00000000759.15_12675023_12698787_1	chr8	-	1009	8	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	23461	10746	23461	-10746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGCTAGCCGCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	12698787	12675022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620
ENSMUSG00000000759.15_12682280_12699790_1	chr8	-	977	8	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	22458	18003	22458	-18003	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGCACATGTGCAACGCG	NA	NA	NA	NA	NA	NA	NA	NA	12699790	12682279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689
ENSMUSG00000000759.15_12687715_12703460_1	chr8	-	964	8	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	18788	23438	18788	-23438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACAGCCCGGAGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	12703460	12687714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363
ENSMUSG00000000759.15_12689560_12704323_1	chr8	-	961	8	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	17925	25283	17925	-25283	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTTCATACGGCACTTA	NA	NA	NA	NA	NA	NA	NA	NA	12704323	12689559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233
ENSMUSG00000000759.15_12690721_12705978_1	chr8	-	987	8	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	16270	26444	16270	-26444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGAGTCACCCCGTGACG	NA	NA	NA	NA	NA	NA	NA	NA	12705978	12690720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805
ENSMUSG00000000759.15_12691154_12707620_1	chr8	-	1016	8	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	14628	26877	14628	-26877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCCTGAGGAAGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	12707620	12691153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445
ENSMUSG00000000759.15_12698727_12708370_1	chr8	-	964	8	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	13878	34450	13878	-34450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAAGTCCCTGGTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	12708370	12698726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299
ENSMUSG00000000759.15_12699764_12714000_1	chr8	-	973	9	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	8248	35487	8248	-35487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTCCTGGTTTGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	12714000	12699763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931
ENSMUSG00000000759.15_12703401_12722099_1	chr8	-	992	8	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	149	39124	149	-39124	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTCTGGACCGCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	12722099	12703400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ENSMUSG00000000759.15_12703462_12722137_1	chr8	-	969	8	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	111	39185	111	-39185	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTCCGGCTTGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	12722137	12703461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ENSMUSG00000000776.14_70676236_70677634_1	chr14	-	1117	3	ISM	ENSMUSG00000000776.14	ENSMUST00000180358.3	2032	8	3096	0	3096	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTCTATTTCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	70677634	70676235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70677019_70677157_70677311_70677453
ENSMUSG00000000776.14_70676625_70677681_1	chr14	-	775	3	ISM	ENSMUSG00000000776.14	ENSMUST00000180358.3	2032	8	3049	389	3049	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGAATGGGGCAGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	70677681	70676624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70677019_70677157_70677311_70677453
ENSMUSG00000000776.14_70676920_70680458_1	chr14	-	1076	8	FSM	ENSMUSG00000000776.14	ENSMUST00000180358.3	2032	8	272	684	272	-684	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGGATCACAAACACCG	NA	NA	NA	NA	NA	NA	NA	NA	70680458	70676919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390
ENSMUSG00000000776.14_70677222_70680630_1	chr14	-	1085	7	ISM	ENSMUSG00000000776.14	ENSMUST00000180358.3	2032	8	100	986	100	-986	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTCCTCCTGGGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	70680630	70677221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390
ENSMUSG00000000782.17_52143198_52152451_1	chr11	-	2328	8	ISM	ENSMUSG00000000782.17	ENSMUST00000086844.10	2471	10	20947	0	20935	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTTTTGTATTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	52152451	52143197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339
ENSMUSG00000000782.17_52143919_52152425_1	chr11	-	1485	7	ISM	ENSMUSG00000000782.17	ENST00000395023.5	2084	9	20961	398	20961	144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTCAACCTTGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	52152425	52143918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151446_52152339
ENSMUSG00000000782.17_52144063_52173607_1	chr11	-	1561	9	ISM	ENSMUSG00000000782.17	ENST00000342854.10	2559	10	605	542	-209	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCCACAAGTCTAAACAATA	NA	NA	NA	NA	NA	NA	NA	NA	52173607	52144062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151446_52152339_52152452_52172948_52173074_52173538
ENSMUSG00000000782.17_52144242_52173852_1	chr11	-	1478	10	FSM	ENSMUSG00000000782.17	ENST00000342854.10	2559	10	360	721	306	-179	multi-exon	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACCTCCCTATTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	52173852	52144241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151446_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ENSMUSG00000000782.17_52144298_52173902_1	chr11	-	1472	10	FSM	ENSMUSG00000000782.17	ENST00000342854.10	2559	10	310	777	256	-235	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATCTTAAGGGGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	52173902	52144297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151446_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ENSMUSG00000000782.17_52144445_52174053_1	chr11	-	1476	10	FSM	ENSMUSG00000000782.17	ENST00000342854.10	2559	10	159	924	105	-382	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCTAACTCAGGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	52174053	52144444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151446_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ENSMUSG00000000782.17_52144705_52173398_1	chr11	-	912	9	FSM	ENSMUSG00000000782.17	ENST00000395023.5	2084	9	-12	1184	0	-642	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGTCCCCAGCTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	52173398	52144704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151446_52152339_52152452_52172948_52173074_52173336
ENSMUSG00000000787.13_13147271_13153802_1	chrX	+	624	6	ISM	ENSMUSG00000000787.13	ENST00000441189.4	4139	16	8	6089	8	-6089	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTACTTGCTCTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	13147270	13153802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702
ENSMUSG00000000787.13_13147271_13157450_1	chrX	+	1899	16	ISM	ENSMUSG00000000787.13	ENST00000644513.1	4262	17	8	2462	8	-2441	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCAGCAGTTCCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	13147270	13157450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401
ENSMUSG00000000787.13_13147271_13157516_1	chrX	+	1965	16	ISM	ENSMUSG00000000787.13	ENST00000644513.1	4262	17	8	2396	8	-2375	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGCAGTCGAGGATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	13147270	13157516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401
ENSMUSG00000000787.13_13151154_13157737_1	chrX	+	1892	15	ISM	ENSMUSG00000000787.13	ENST00000644074.1	4630	17	3891	2549	3891	-2154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAGTAGGTCACCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	13151153	13157737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ENSMUSG00000000787.13_13152273_13155179_1	chrX	+	874	7	ISM	ENSMUSG00000000787.13	ENST00000644513.1	4262	17	5010	4733	5010	-4712	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTTTGTTACCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	13152272	13155179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018
ENSMUSG00000000787.13_13152273_13157843_1	chrX	+	1950	14	ISM	ENSMUSG00000000787.13	ENST00000644074.1	4630	17	5010	2443	5010	-2048	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	730	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTCCACTGAAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	13152272	13157843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ENSMUSG00000000787.13_13152354_13155091_1	chrX	+	606	6	ISM	ENSMUSG00000000787.13	ENST00000441189.4	4139	16	5091	4800	5091	-4800	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACGTGGATGCCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	13152353	13155091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13155018
ENSMUSG00000000787.13_13153523_13155699_1	chrX	+	649	6	ISM	ENSMUSG00000000787.13	ENST00000441189.4	4139	16	6260	4192	6260	-4192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGAACAAGACACTATGC	NA	NA	NA	NA	NA	NA	NA	NA	13153522	13155699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13155018_13155180_13155633
ENSMUSG00000000787.13_13154024_13156506_1	chrX	+	861	7	ISM	ENSMUSG00000000787.13	ENST00000644513.1	4262	17	6761	3406	6761	-3385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTATCCATGGAGACCG	NA	NA	NA	NA	NA	NA	NA	NA	13154023	13156506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417
ENSMUSG00000000787.13_13154024_13158261_1	chrX	+	1976	11	ISM	ENSMUSG00000000787.13	ENST00000644074.1	4630	17	6761	2025	6761	-1630	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGGGAAAAACAAACAACAA	NA	NA	NA	NA	NA	NA	NA	NA	13154023	13158261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ENSMUSG00000000787.13_13154129_13156545_1	chrX	+	795	7	ISM	ENSMUSG00000000787.13	ENST00000644513.1	4262	17	6866	3367	6866	-3346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCTTCACCAGTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	13154128	13156545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417
ENSMUSG00000000787.13_13154538_13156494_1	chrX	+	594	5	ISM	ENSMUSG00000000787.13	ENST00000441189.4	4139	16	7275	3397	7275	-3397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATATGCTTGTACCAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	13154537	13156494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13154604_13155018_13155180_13155633_13155779_13156075_13156221_13156417
ENSMUSG00000000787.13_13154810_13156802_1	chrX	+	852	6	ISM	ENSMUSG00000000787.13	ENST00000644513.1	4262	17	7547	3110	7547	-3089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTTTAGTTACCGGA	NA	NA	NA	NA	NA	NA	NA	NA	13154809	13156802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684
ENSMUSG00000000787.13_13154849_13158446_1	chrX	+	1902	9	ISM	ENSMUSG00000000787.13	ENST00000644074.1	4630	17	7586	1840	7586	-1445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAAGCACTGTTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	13154848	13158446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ENSMUSG00000000787.13_13155683_13158746_1	chrX	+	1930	7	ISM	ENSMUSG00000000787.13	ENST00000441189.4	4139	16	8420	1145	8420	-1145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAATGAACAGGAAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	13155682	13158746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ENSMUSG00000000787.13_13155755_13158788_1	chrX	+	1900	7	ISM	ENSMUSG00000000787.13	ENST00000441189.4	4139	16	8492	1103	8492	-1103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	965	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGATTCACATTACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	13155754	13158788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ENSMUSG00000000787.13_13156073_13157737_1	chrX	+	828	6	ISM	ENSMUSG00000000787.13	ENST00000441189.4	4139	16	8810	2154	8810	-2154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAGTAGGTCACCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	13156072	13157737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ENSMUSG00000000787.13_13156415_13157843_1	chrX	+	789	5	ISM	ENSMUSG00000000787.13	ENST00000441189.4	4139	16	9152	2048	9152	-2048	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTCCACTGAAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	13156414	13157843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ENSMUSG00000000787.13_13156685_13158026_1	chrX	+	787	4	ISM	ENSMUSG00000000787.13	ENST00000441189.4	4139	16	9422	1865	9422	-1865	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAATGTACTGTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	13156684	13158026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13156803_13157139_13157294_13157401_13157542_13157651
ENSMUSG00000000787.13_13156712_13159195_1	chrX	+	1929	4	ISM	ENSMUSG00000000787.13	ENST00000441189.4	4139	16	9449	696	9449	-696	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTCTAAAACTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	13156711	13159195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13156803_13157139_13157294_13157401_13157542_13157651
ENSMUSG00000000787.13_13157176_13158261_1	chrX	+	868	3	ISM	ENSMUSG00000000787.13	ENST00000441189.4	4139	16	9913	1630	9913	-1630	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGGGAAAAACAAACAACAA	NA	NA	NA	NA	NA	NA	NA	NA	13157175	13158261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13157294_13157401_13157542_13157651
ENSMUSG00000000787.13_13157484_13159499_1	chrX	+	1909	2	ISM	ENSMUSG00000000787.13	ENST00000644513.1	4262	17	10221	413	10221	-392	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGACAGATTTCTAGATAC	NA	NA	NA	NA	NA	NA	NA	NA	13157483	13159499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_13157545_13157651
ENSMUSG00000000794.10_89429334_89552791_1	chr3	+	915	4	ISM	ENSMUSG00000000794.10	ENST00000358505.2	1671	8	27	21921	27	-21921	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGCTCATCTCCATCAC	NA	NA	NA	NA	NA	NA	NA	NA	89429333	89552791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89429691_89472165_89472262_89516624_89517044_89552748
ENSMUSG00000000794.10_89429443_89559428_1	chr3	+	1009	5	ISM	ENSMUSG00000000794.10	ENST00000358505.2	1671	8	136	15284	136	-15284	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACGGGTAAGCCACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	89429442	89559428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89429691_89472165_89472262_89516624_89517044_89552748_89552891_89559324
ENSMUSG00000000794.10_89429581_89568494_1	chr3	+	945	6	ISM	ENSMUSG00000000794.10	ENST00000358505.2	1671	8	274	6218	274	-6218	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGATTGACCATGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	89429580	89568494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89429691_89472165_89472262_89516624_89517044_89552748_89552891_89559324_89559436_89568427
ENSMUSG00000000794.10_89516670_89574491_1	chr3	+	925	6	ISM	ENSMUSG00000000794.10	ENST00000358505.2	1671	8	87363	221	87363	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGTTTCAATTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	89516669	89574491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89517044_89552748_89552891_89559324_89559436_89568427_89568556_89570020_89570091_89574391
ENSMUSG00000000794.10_89516821_89574624_1	chr3	+	907	6	ISM	ENSMUSG00000000794.10	ENST00000358505.2	1671	8	87514	88	87514	-88	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCTATCGGGATCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	89516820	89574624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89517044_89552748_89552891_89559324_89559436_89568427_89568556_89570020_89570091_89574391
ENSMUSG00000000794.10_89516888_89574706_1	chr3	+	922	6	ISM	ENSMUSG00000000794.10	ENST00000358505.2	1671	8	87581	6	87581	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCATTACCCATAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	89516887	89574706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89517044_89552748_89552891_89559324_89559436_89568427_89568556_89570020_89570091_89574391
ENSMUSG00000000811.15_89621198_89651745_1	chr6	+	1729	15	NNC	ENSMUSG00000000811.15	novel	1841	15	NA	NA	38	-69	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGACATTACTCAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	89621197	89651745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649949_89650046_89651042_89651173_89651710
ENSMUSG00000000811.15_89621198_89651745_2	chr6	+	1734	15	FSM	ENSMUSG00000000811.15	ENST00000523403.3	1841	15	38	69	38	-69	multi-exon	FALSE	canonical	NA	NA	NA	NA	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGACATTACTCAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	89621197	89651745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649949_89650046_89651042_89651178_89651710
ENSMUSG00000000811.15_89621198_89651814_1	chr6	+	1794	15	NNC	ENSMUSG00000000811.15	novel	1841	15	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGCCCATGACATCTG	NA	NA	NA	NA	NA	NA	NA	NA	89621197	89651814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642690_89642775_89646286_89646364_89646799_89646957_89649949_89650046_89651042_89651178_89651710
ENSMUSG00000000811.15_89621257_89651745_1	chr6	+	1675	15	FSM	ENSMUSG00000000811.15	ENST00000523403.3	1841	15	97	69	97	-69	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGACATTACTCAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	89621256	89651745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649949_89650046_89651042_89651178_89651710
ENSMUSG00000000811.15_89621257_89651814_1	chr6	+	1744	15	FSM	ENSMUSG00000000811.15	ENST00000523403.3	1841	15	97	0	97	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGCCCATGACATCTG	NA	NA	NA	NA	NA	NA	NA	NA	89621256	89651814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649949_89650046_89651042_89651178_89651710
ENSMUSG00000000811.15_89621257_89651814_2	chr6	+	1742	15	NNC	ENSMUSG00000000811.15	novel	1841	15	NA	NA	97	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGCCCATGACATCTG	NA	NA	NA	NA	NA	NA	NA	NA	89621256	89651814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649951_89650046_89651042_89651178_89651710
ENSMUSG00000000811.15_89621257_89651814_3	chr6	+	1738	15	NNC	ENSMUSG00000000811.15	novel	1841	15	NA	NA	97	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGCCCATGACATCTG	NA	NA	NA	NA	NA	NA	NA	NA	89621256	89651814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_89621385_89627513_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649949_89650046_89651042_89651178_89651710
ENSMUSG00000000811.15_89621257_89651814_4	chr6	+	1739	15	NNC	ENSMUSG00000000811.15	novel	1841	15	NA	NA	97	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGCCCATGACATCTG	NA	NA	NA	NA	NA	NA	NA	NA	89621256	89651814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649949_89650046_89651042_89651173_89651710
ENSMUSG00000000811.15_89621346_89651814_1	chr6	+	1655	15	FSM	ENSMUSG00000000811.15	ENST00000523403.3	1841	15	186	0	186	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGCCCATGACATCTG	NA	NA	NA	NA	NA	NA	NA	NA	89621345	89651814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649949_89650046_89651042_89651178_89651710
ENSMUSG00000000817.11_161609137_161610575_1	chr1	-	462	2	ISM	ENSMUSG00000000817.11	ENST00000340030.4	803	3	5283	-3	5283	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTTAAAATGATCTACT	NA	NA	NA	NA	NA	NA	NA	NA	161610575	161609136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_161609540_161610516
ENSMUSG00000000817.11_161609249_161615645_1	chr1	-	481	3	FSM	ENSMUSG00000000817.11	ENST00000340030.4	803	3	213	109	213	-109	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAATCTTACCAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	161615645	161609248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_161609540_161610516_161610574_161615512
ENSMUSG00000000827.19_181138992_181157398_1	chr2	+	1166	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	18	1766	0	218	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCATACAGACTGAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	181138991	181157398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
ENSMUSG00000000827.19_181139024_181157452_1	chr2	+	1188	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	50	1712	0	272	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAACTGCTTCATTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	181139023	181157452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
ENSMUSG00000000827.19_181139024_181157537_1	chr2	+	1273	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	50	1627	0	357	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAATAGGAAAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	181139023	181157537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
ENSMUSG00000000827.19_181139024_181157603_1	chr2	+	1381	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	66	2156	0	423	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGCTGAAACTCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	181139023	181157603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ENSMUSG00000000827.19_181143696_181157894_1	chr2	+	1426	6	ISM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	4738	1865	4672	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTAGCACCTGAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	181143695	181157894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ENSMUSG00000000827.19_181143770_181157738_1	chr2	+	1154	5	ISM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	4796	1426	4746	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACCAGTTATTACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	181143769	181157738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
ENSMUSG00000000827.19_181143789_181157822_1	chr2	+	1219	5	ISM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	4815	1342	4765	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTCCACTCTGACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	181143788	181157822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
ENSMUSG00000000827.19_181149959_181158049_2	chr2	+	1328	3	ISM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	10985	1115	10935	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCTGCTGTCATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	181149958	181158049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181150061_181154831_181154881_181156872
ENSMUSG00000000838.18_67722230_67741570_1	chrX	+	823	7	ISM	ENSMUSG00000000838.18	ENST00000621453.4	1838	15	9	17697	0	-17697	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTCCTTTCCCTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	67722229	67741570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453
ENSMUSG00000000838.18_67722230_67748949_1	chrX	+	1278	11	ISM	ENSMUSG00000000838.18	ENST00000218200.12	4312	16	9	12609	0	-10318	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTTTCTCAACCTAACA	NA	NA	NA	NA	NA	NA	NA	NA	67722229	67748949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854
ENSMUSG00000000838.18_67722417_67743818_1	chrX	+	789	8	ISM	ENSMUSG00000000838.18	ENST00000621453.4	1838	15	196	15449	0	-15449	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATATTTATGGAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	67722416	67743818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665
ENSMUSG00000000838.18_67735138_67747332_1	chrX	+	809	8	ISM	ENSMUSG00000000838.18	ENST00000621453.4	1838	15	12917	11935	12715	-11935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGGATTGAGGCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	67735137	67747332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268
ENSMUSG00000000838.18_67739138_67755946_1	chrX	+	1202	10	ISM	ENSMUSG00000000838.18	ENSMUST00000114657.9	4076	16	16721	5623	16715	-3321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAGACGGACGGCGGCG	NA	NA	NA	NA	NA	NA	NA	NA	67739137	67755946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836
ENSMUSG00000000838.18_67739185_67754237_1	chrX	+	765	8	ISM	ENSMUSG00000000838.18	ENST00000621453.4	1838	15	16964	5030	16762	-5030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACAAATTGGAGCTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	67739184	67754237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67751647_67751735_67754189
ENSMUSG00000000838.18_67739230_67754293_1	chrX	+	776	8	ISM	ENSMUSG00000000838.18	ENST00000621453.4	1838	15	17009	4974	16807	-4974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGACTGATGATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	67739229	67754293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67751647_67751735_67754189
ENSMUSG00000000838.18_67741268_67756929_1	chrX	+	1258	10	ISM	ENSMUSG00000000838.18	ENSMUST00000114657.9	4076	16	18851	4640	18845	-2338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAACCTAGTTTCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	67741267	67756929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846
ENSMUSG00000000838.18_67741453_67759193_1	chrX	+	1233	10	ISM	ENSMUSG00000000838.18	ENST00000218200.12	4312	16	19232	2365	19030	-74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCGCACGGGTAAAGATC	NA	NA	NA	NA	NA	NA	NA	NA	67741452	67759193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759119
ENSMUSG00000000838.18_67741507_67755899_1	chrX	+	770	7	ISM	ENSMUSG00000000838.18	ENST00000621453.4	1838	15	19286	3368	19084	-3368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTCATTAGCTCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	67741506	67755899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67751647_67751735_67754189_67754386_67755836
ENSMUSG00000000838.18_67741554_67755954_1	chrX	+	778	7	ISM	ENSMUSG00000000838.18	ENST00000621453.4	1838	15	19333	3313	19131	-3313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACGGCGGCGTGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	67741553	67755954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67751647_67751735_67754189_67754386_67755836
ENSMUSG00000000838.18_67743759_67756929_1	chrX	+	816	7	ISM	ENSMUSG00000000838.18	ENST00000621453.4	1838	15	21538	2338	21336	-2338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAACCTAGTTTCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	67743758	67756929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67743837_67743947_67744027_67747268_67747379_67751647_67751735_67754189_67754386_67755836_67756020_67756846
ENSMUSG00000000838.18_67743946_67759268_1	chrX	+	838	7	ISM	ENSMUSG00000000838.18	ENST00000621453.4	1838	15	21725	-1	21523	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTACCCTAAATAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	67743945	67759268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67744027_67747268_67747379_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ENSMUSG00000000838.18_67743991_67759499_1	chrX	+	1207	8	ISM	ENSMUSG00000000838.18	ENST00000218200.12	4312	16	21770	2059	21568	232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACTTAACACTTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	67743990	67759499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759119
ENSMUSG00000000838.18_67754278_67759949_1	chrX	+	1204	4	ISM	ENSMUSG00000000838.18	ENSMUST00000114655.8	4199	17	31870	1620	31855	682	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGCTTTCCATATTT	NA	NA	NA	NA	NA	NA	NA	NA	67754277	67759949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67754386_67755836_67756020_67756846_67756930_67759119
ENSMUSG00000000838.18_67754320_67760022_1	chrX	+	1235	4	ISM	ENSMUSG00000000838.18	ENSMUST00000114655.8	4199	17	31912	1547	31897	755	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTTGTTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	67754319	67760022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67754386_67755836_67756020_67756846_67756930_67759119
ENSMUSG00000000838.18_67755874_67760142_1	chrX	+	1252	3	ISM	ENSMUSG00000000838.18	ENSMUST00000114654.8	4061	16	33466	1427	33451	875	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGCTACTTGCAAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	67755873	67760142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67756020_67756846_67756930_67759119
ENSMUSG00000000838.18_67755936_67760187_1	chrX	+	1235	3	ISM	ENSMUSG00000000838.18	ENSMUST00000114654.8	4061	16	33528	1382	33513	920	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCTTTGGCCTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	67755935	67760187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_67756020_67756846_67756930_67759119
ENSMUSG00000000861.16_24028173_24059147_1	chr11	+	774	3	FSM	ENSMUSG00000000861.16	ENST00000643004.1	741	3	-33	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTTGGGCAGGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	24028172	24059147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_24028446_24035320_24035651_24058976
ENSMUSG00000000876.12_154428449_154434215_1	chr2	-	1695	2	ISM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	11413	771	11393	-771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTCTGCAAGAGCACTTA	NA	NA	NA	NA	NA	NA	NA	NA	154434215	154428448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154430013_154434084
ENSMUSG00000000876.12_154428678_154445505_1	chr2	-	1666	4	FSM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	123	1000	103	-1000	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	NA	NA	NA	NA	NA	NA	NA	NA	154445505	154428677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_154430013_154434084_154434284_154438121_154438185_154445436
ENSMUSG00000000884.18_18317690_18384938_1	chr16	+	3006	8	FSM	ENSMUSG00000000884.18	ENSMUST00000090086.11	3549	8	52	491	52	-439	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAAGATAACCCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	18317689	18384938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ENSMUSG00000000884.18_18317869_18385041_1	chr16	+	3024	7	ISM	ENSMUSG00000000884.18	ENSMUST00000090086.11	3549	8	231	388	231	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGGAGATGACCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	18317868	18385041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ENSMUSG00000000884.18_18359301_18385174_1	chr16	+	3019	6	ISM	ENSMUSG00000000884.18	ENSMUST00000090086.11	3549	8	41663	255	70	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTCCACAGTGGAACAT	NA	NA	NA	NA	NA	NA	NA	NA	18359300	18385174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ENSMUSG00000000884.18_18362857_18385430_1	chr16	+	3128	4	ISM	ENSMUSG00000000884.18	ENSMUST00000090086.11	3549	8	45219	-1	3626	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTAGACTTGATTTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	18362856	18385430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18363024_18366842_18366942_18371116_18371333_18382784
ENSMUSG00000000901.18_75759468_75761352_1	chr10	-	581	2	ISM	ENSMUSG00000000901.18	ENSMUST00000120281.8	1793	9	6957	412	6957	-412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGCAATGAGGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	75761352	75759467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_75759950_75761253
ENSMUSG00000000901.18_75759576_75761511_1	chr10	-	632	2	ISM	ENSMUSG00000000901.18	ENSMUST00000120281.8	1793	9	6798	520	6798	-520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTTGGGCTGGCAATAT	NA	NA	NA	NA	NA	NA	NA	NA	75761511	75759575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_75759950_75761253
ENSMUSG00000000902.14_75732603_75757297_1	chr10	-	1368	8	FSM	ENSMUSG00000000902.14	ENST00000263121.12	1352	8	2	-18	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGTAGCATAAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	75757297	75732602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75750897_75751028_75752606_75752746_75757136
ENSMUSG00000000902.14_75740364_75752679_1	chr10	-	654	6	ISM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	4769	7753	4620	-7743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGACATGTCAGAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	75752679	75740363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633
ENSMUSG00000000902.14_75741897_75757168_1	chr10	-	674	6	ISM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	280	9286	131	-9276	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGATCAATCCGACCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	75757168	75741896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633_75752746_75757136
ENSMUSG00000000902.14_75742000_75757276_1	chr10	-	679	6	ISM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	172	9389	23	-9379	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTTGTGATGACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	75757276	75741999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633_75752746_75757136
ENSMUSG00000000902.14_75746098_75757451_1	chr10	-	713	5	ISM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	-3	13487	0	-13477	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGTGATCCATGAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	75757451	75746097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_75746116_75747352_75747491_75750897_75751028_75752633_75752746_75757136
ENSMUSG00000000934.10_75528884_75537550_1	chr15	-	665	5	ISM	ENSMUSG00000000934.10	ENSMUST00000000958.9	1903	14	13099	0	13099	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTGTCACTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	75537550	75528883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75529064_75529532_75529680_75535204_75535300_75535863_75535992_75537435
ENSMUSG00000000934.10_75528996_75538170_1	chr15	-	622	6	ISM	ENSMUSG00000000934.10	ENSMUST00000000958.9	1903	14	12479	112	12479	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCAACCAGGCAGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	75538170	75528995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75529064_75529532_75529680_75535204_75535300_75535863_75535992_75537435_75537551_75538101
ENSMUSG00000000934.10_75529594_75539386_1	chr15	-	611	6	ISM	ENSMUSG00000000934.10	ENSMUST00000000958.9	1903	14	11263	710	11263	-710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGTGGCCCTGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	75539386	75529593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75529680_75535204_75535300_75535863_75535992_75537435_75537551_75538101_75538171_75539268
ENSMUSG00000000934.10_75535246_75539747_1	chr15	-	629	6	ISM	ENSMUSG00000000934.10	ENSMUST00000000958.9	1903	14	10902	6362	10902	-6362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTGACCTGAGAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	75539747	75535245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75535300_75535863_75535992_75537435_75537551_75538101_75538171_75539268_75539455_75539670
ENSMUSG00000000934.10_75537534_75541207_1	chr15	-	633	6	ISM	ENSMUSG00000000934.10	ENSMUST00000000958.9	1903	14	9442	8650	9442	-8650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTGCAGGACTTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	75541207	75537533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75537551_75538101_75538171_75539268_75539455_75539670_75539815_75540474_75540620_75541135
ENSMUSG00000000934.10_75539739_75546225_1	chr15	-	617	5	ISM	ENSMUSG00000000934.10	ENSMUST00000000958.9	1903	14	4424	10855	4424	-10855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGACTGGAAGTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	75546225	75539738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75539815_75540474_75540620_75541135_75541324_75541910_75542034_75546140
ENSMUSG00000000934.10_75540566_75550523_1	chr15	-	622	6	ISM	ENSMUSG00000000934.10	ENSMUST00000000958.9	1903	14	126	11682	126	-11682	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAACACAGTCATGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	75550523	75540565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75540620_75541135_75541324_75541910_75542034_75546140_75546263_75547867_75547981_75550501
ENSMUSG00000000934.10_75541166_75550649_1	chr15	-	664	5	ISM	ENSMUSG00000000934.10	ENSMUST00000000958.9	1903	14	0	12282	0	-12282	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGAGGATGTGGTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	75550649	75541165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75541324_75541910_75542034_75546140_75546263_75547867_75547981_75550501
ENSMUSG00000000938.12_52209236_52217397_1	chr6	-	665	2	FSM	ENSMUSG00000000938.12	ENST00000396344.4	1555	2	471	419	437	-334	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTGAGATCTTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	52217397	52209235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_52209757_52217253
ENSMUSG00000000938.12_52209312_52217481_1	chr6	-	669	2	NIC	ENSMUSG00000000938.12	novel	1555	2	NA	NA	353	-410	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTTTGTCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	52217481	52209311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_52209757_52217257
ENSMUSG00000000938.12_52209312_52217481_2	chr6	-	673	2	FSM	ENSMUSG00000000938.12	ENST00000396344.4	1555	2	387	495	353	-410	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTTTGTCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	52217481	52209311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_52209757_52217253
ENSMUSG00000000938.12_52209394_52211919_1	chr6	-	1348	2	FSM	ENSMUSG00000000938.12	ENSMUST00000125581.2	2565	2	0	1217	0	-492	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTTTCTCCCTCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	52211919	52209393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_52209761_52210938
ENSMUSG00000000957.12_54669069_54676282_1	chr14	+	1265	6	ISM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	0	2440	0	-2440	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAGGAAGAGAAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	54669068	54676282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54669431_54673201_54673351_54673594_54673718_54674071_54674380_54675057_54675220_54676121
ENSMUSG00000000957.12_54669175_54676764_1	chr14	+	1325	8	ISM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	106	1958	85	-1958	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCTGGAACCCGGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	54669174	54676764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54669431_54673201_54673351_54673594_54673718_54674071_54674380_54675057_54675220_54676121_54676283_54676467_54676607_54676737
ENSMUSG00000000957.12_54669175_54676782_1	chr14	+	1343	8	ISM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	106	1940	85	-1940	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCAAGCACATTAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	54669174	54676782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54669431_54673201_54673351_54673594_54673718_54674071_54674380_54675057_54675220_54676121_54676283_54676467_54676607_54676737
ENSMUSG00000000957.12_54669290_54676819_1	chr14	+	1265	8	ISM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	221	1903	200	-1903	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGGACAAGATCGATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	54669289	54676819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54669431_54673201_54673351_54673594_54673718_54674071_54674380_54675057_54675220_54676121_54676283_54676467_54676607_54676737
ENSMUSG00000000957.12_54669404_54677399_1	chr14	+	1258	9	ISM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	335	1323	314	-1323	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGAGTACCCTAAAAACATC	NA	NA	NA	NA	NA	NA	NA	NA	54669403	54677399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54669431_54673201_54673351_54673594_54673718_54674071_54674380_54675057_54675220_54676121_54676283_54676467_54676607_54676737_54676889_54677361
ENSMUSG00000000957.12_54673294_54677936_1	chr14	+	1356	9	ISM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	4225	786	4204	-786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGACGGAGGTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	54673293	54677936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54673351_54673594_54673718_54674071_54674380_54675057_54675220_54676121_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797
ENSMUSG00000000957.12_54673324_54677936_1	chr14	+	1326	9	ISM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	4255	786	4234	-786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGACGGAGGTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	54673323	54677936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54673351_54673594_54673718_54674071_54674380_54675057_54675220_54676121_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797
ENSMUSG00000000957.12_54674110_54678060_1	chr14	+	1262	7	ISM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	5041	662	5020	-662	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCAGACGCCATGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	54674109	54678060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54674380_54675057_54675220_54676121_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797
ENSMUSG00000000957.12_54674154_54678111_1	chr14	+	1269	7	ISM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	5085	611	5064	-611	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGGACAAGGTCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	54674153	54678111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54674380_54675057_54675220_54676121_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797
ENSMUSG00000000957.12_54674228_54678174_1	chr14	+	1254	7	NNC	ENSMUSG00000000957.12	novel	2596	10	NA	NA	5138	-548	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGCCAGTGGCTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	54674227	54678174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_54674380_54675057_54675224_54676129_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797
ENSMUSG00000000957.12_54675057_54678325_1	chr14	+	1258	6	ISM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	5988	397	5967	-397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGACGGTTGGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	54675056	54678325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54675220_54676121_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797
ENSMUSG00000000957.12_54676049_54678598_1	chr14	+	1441	5	ISM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	6980	124	6959	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1088	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTGTACGTTTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	54676048	54678598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797
ENSMUSG00000000957.12_54676515_54678767_1	chr14	+	1329	4	ISM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	7446	-45	7425	45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACAGAGAGTCTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	54676514	54678767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54676607_54676737_54676889_54677361_54677478_54677797
ENSMUSG00000000958.11_54606901_54651471_1	chr14	-	2189	11	NNC	ENSMUSG00000000958.11	novel	2223	11	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	54651471	54606900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_54607344_54607549_54607729_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646504_54647534_54647677_54651336
ENSMUSG00000000958.11_54606901_54651471_2	chr14	-	2196	11	NIC	ENSMUSG00000000958.11	novel	2223	11	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	54651471	54606900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54647534_54647677_54651336
ENSMUSG00000000959.8_54598298_54607130_1	chr14	+	2533	10	NNC	ENSMUSG00000000959.8	novel	2538	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTTCAGAGTTGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	54598297	54607130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_54598370_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ENSMUSG00000000959.8_54598298_54607130_2	chr14	+	2532	10	NNC	ENSMUSG00000000959.8	novel	2538	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTTCAGAGTTGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	54598297	54607130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_54598375_54598778_54598926_54600744_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ENSMUSG00000000959.8_54604517_54605832_1	chr14	+	542	5	ISM	ENSMUSG00000000959.8	ENST00000412791.5	839	6	351	118	351	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGAAAGCTCCCAACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	54604516	54605832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605774
ENSMUSG00000000959.8_54604548_54605929_1	chr14	+	608	5	ISM	ENSMUSG00000000959.8	ENST00000412791.5	839	6	382	21	382	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACCCCTGCCTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	54604547	54605929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605774
ENSMUSG00000000959.8_54604720_54605950_1	chr14	+	612	4	ISM	ENSMUSG00000000959.8	ENST00000412791.5	839	6	554	0	554	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCCACACAGACTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	54604719	54605950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54604888_54605044_54605150_54605249_54605413_54605774
ENSMUSG00000000976.14_83646588_83670415_1	chr11	+	2696	18	ISM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	2066	4165	2066	-4165	internal_fragment	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTCTTCCACTTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	83646587	83670415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226
ENSMUSG00000000976.14_83648159_83672058_1	chr11	+	2715	18	ISM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	3637	2522	3637	-2522	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCGCAGCCCTCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	83648158	83672058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ENSMUSG00000000976.14_83656784_83672732_1	chr11	+	2695	13	ISM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	12262	1848	12262	-1848	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAACCCAGACAACCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	83656783	83672732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ENSMUSG00000000976.14_83656843_83672847_1	chr11	+	2751	13	ISM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	12321	1733	12321	-1733	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAATTGTGTTTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	83656842	83672847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ENSMUSG00000000976.14_83659976_83673211_1	chr11	+	2699	11	ISM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	15454	1369	15454	-1369	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACCAACTTTTGTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	83659975	83673211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ENSMUSG00000000976.14_83663192_83673571_1	chr11	+	2725	9	ISM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	18670	1009	18670	-1009	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTATCCCAGTACCC	NA	NA	NA	NA	NA	NA	NA	NA	83663191	83673571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ENSMUSG00000000976.14_83663241_83673631_1	chr11	+	2736	9	ISM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	18719	949	18719	-949	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCCAGTCTCAGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	83663240	83673631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ENSMUSG00000000976.14_83666571_83674031_1	chr11	+	2696	6	ISM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	22049	549	22049	-549	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAACAGAAACCAAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	83666570	83674031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ENSMUSG00000000976.14_83670257_83674580_1	chr11	+	2779	2	ISM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	25735	0	25735	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTGGTTTCTGGGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83670256	83674580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83670432_83671976
ENSMUSG00000000976.14_83670327_83674580_1	chr11	+	2709	2	ISM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	25805	0	25805	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTGGTTTCTGGGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83670326	83674580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83670432_83671976
ENSMUSG00000001016.13_90383464_90394346_1	chr3	+	947	12	ISM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	10	1340	10	-1340	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCGTGTGAGAGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	90383463	90394346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289
ENSMUSG00000001016.13_90384310_90394624_1	chr3	+	1009	12	ISM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	856	1062	856	-1062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTATCTCTGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	90384309	90394624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533
ENSMUSG00000001016.13_90387986_90394815_1	chr3	+	879	11	ISM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	4532	871	4532	-871	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGCTTATGAGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	90387985	90394815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ENSMUSG00000001016.13_90388750_90395037_1	chr3	+	914	9	ISM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	5296	649	5296	-649	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAAAACGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	90388749	90395037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ENSMUSG00000001016.13_90391842_90395270_1	chr3	+	976	7	ISM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	8388	416	8388	-416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTTTTGGTTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	90391841	90395270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ENSMUSG00000001016.13_90394531_90395686_1	chr3	+	1015	2	ISM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	11077	0	11077	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	696	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTACAAGCATTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	90394530	90395686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90394625_90394765
ENSMUSG00000001017.16_90406272_90410487_1	chr3	-	1228	2	ISM	ENSMUSG00000001017.16	ENSMUST00000107343.8	3118	4	6270	9	3287	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTAACCCAGGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	90410487	90406271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_90407415_90410402
ENSMUSG00000001017.16_90406639_90414885_1	chr3	-	1151	4	ISM	ENSMUSG00000001017.16	ENSMUST00000107346.8	1321	5	1896	-162	-1111	162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACATTGAAACCACATAGA	NA	NA	NA	NA	NA	NA	NA	NA	90414885	90406638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_90407415_90410402_90410590_90413414_90413569_90414851
ENSMUSG00000001017.16_90406801_90416588_1	chr3	-	1128	5	FSM	ENSMUSG00000001017.16	ENSMUST00000107346.8	1321	5	193	0	169	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACATCTTTCTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	90416588	90406800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_90407415_90410402_90410590_90413414_90413569_90414851_90414934_90416497
ENSMUSG00000001017.16_90406801_90416639_1	chr3	-	1179	5	FSM	ENSMUSG00000001017.16	ENSMUST00000107346.8	1321	5	142	0	118	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACATCTTTCTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	90416639	90406800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_90407415_90410402_90410590_90413414_90413569_90414851_90414934_90416497
ENSMUSG00000001017.16_90407161_90410494_1	chr3	-	484	3	ISM	ENSMUSG00000001017.16	ENST00000368687.1	1095	4	3280	159	3280	-159	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCTATAAAACAACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	90410494	90407160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_90407415_90409422_90409561_90410402
ENSMUSG00000001017.16_90407334_90413489_1	chr3	-	481	4	ISM	ENSMUSG00000001017.16	ENSMUST00000001043.14	3257	5	3269	1071	285	-332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGTATTGACCAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	90413489	90407333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414
ENSMUSG00000001017.16_90410438_90413724_1	chr3	-	459	2	ISM	ENSMUSG00000001017.16	ENST00000368687.1	1095	4	50	3436	50	-3436	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAACCCTGCTTAGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	90413724	90410437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_90410587_90413414
ENSMUSG00000001018.16_90396756_90397491_1	chr3	-	176	2	ISM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	849	1415	849	-1415	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTCTGGTAGACACGA	NA	NA	NA	NA	NA	NA	NA	NA	90397491	90396755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_90396901_90397460
ENSMUSG00000001018.16_90396888_90397901_1	chr3	-	179	3	ISM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	439	1547	439	-1547	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAAACCACAGCGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	90397901	90396887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_90396901_90397460_90397580_90397854
ENSMUSG00000001018.16_90397521_90398198_1	chr3	-	166	3	ISM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	142	2180	142	-2180	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTTAATGCCAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	90398198	90397520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_90397580_90397854_90397902_90398138
ENSMUSG00000001020.9_90511078_90513140_1	chr3	+	286	3	FSM	ENSMUSG00000001020.9	ENSMUST00000001046.7	498	3	0	212	0	-212	multi-exon	FALSE	canonical	NA	NA	NA	NA	2661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGCATTGCCATGATG	NA	NA	NA	NA	NA	NA	NA	NA	90511077	90513140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_90511114_90512303_90512460_90513046
ENSMUSG00000001025.9_90520189_90521722_1	chr3	+	727	3	NNC	ENSMUSG00000001025.9	novel	731	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTGTTCTGGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	90520188	90521722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_90520529_90521049_90521212_90521497
ENSMUSG00000001036.18_61410241_61437199_2	chr11	-	1345	8	FSM	ENSMUSG00000001036.18	ENST00000571254.1	1768	8	424	-1	424	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGGGAACTTGCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	61437199	61410240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423498_61424414_61424508_61426096_61426210_61436975
ENSMUSG00000001036.18_61410241_61437368_1	chr11	-	1514	8	FSM	ENSMUSG00000001036.18	ENST00000571254.1	1768	8	255	-1	255	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGGGAACTTGCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	61437368	61410240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423498_61424414_61424508_61426096_61426210_61436975
ENSMUSG00000001036.18_61410431_61437443_1	chr11	-	1394	8	NNC	ENSMUSG00000001036.18	novel	1768	8	NA	NA	180	-189	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTCTGGTCCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	61437443	61410430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_61410534_61412484_61412696_61413231_61413319_61413854_61414020_61423343_61423498_61424414_61424508_61426096_61426210_61436975
ENSMUSG00000001036.18_61412483_61437541_1	chr11	-	1396	7	ISM	ENSMUSG00000001036.18	ENST00000571254.1	1768	8	82	2241	82	-2241	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATGTGCTTCGTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	61437541	61412482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61412701_61413231_61413319_61413854_61414020_61423343_61423498_61424414_61424508_61426096_61426210_61436975
ENSMUSG00000001039.13_61396081_61403265_1	chr11	+	426	6	ISM	ENSMUSG00000001039.13	ENSMUST00000102657.10	817	7	111	492	111	-492	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTGATGCTCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	61396080	61403265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197
ENSMUSG00000001039.13_61397167_61403570_1	chr11	+	505	6	ISM	ENSMUSG00000001039.13	ENSMUST00000102657.10	817	7	1197	187	1197	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACAAGGAGTCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	61397166	61403570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197_61403266_61403477
ENSMUSG00000001052.16_129795990_129834482_1	chr3	-	1212	9	ISM	ENSMUSG00000001052.16	ENSMUST00000001079.15	5128	24	20074	19582	19891	-18449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTGGAGTTCATCGC	NA	NA	NA	NA	NA	NA	NA	NA	129834482	129795989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322
ENSMUSG00000001054.10_51514498_51526723_1	chr11	-	1945	10	NNC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGATTGCATGGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51526723	51514497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_51514967_51515051_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
ENSMUSG00000001054.10_51514498_51526723_2	chr11	-	1942	10	NNC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGATTGCATGGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51526723	51514497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520308_51520489_51526416
ENSMUSG00000001054.10_51514498_51526723_3	chr11	-	1941	10	NNC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGATTGCATGGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51526723	51514497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518455_51518590_51518706_51518853_51520302_51520489_51526416
ENSMUSG00000001054.10_51514498_51526723_4	chr11	-	1942	10	NNC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGATTGCATGGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51526723	51514497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_51514974_51515055_51515205_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
ENSMUSG00000001054.10_51514498_51526723_5	chr11	-	1943	10	NNC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGATTGCATGGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51526723	51514497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_51514974_51515055_51515211_51515301_51515405_51516500_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
ENSMUSG00000001054.10_51514498_51526723_6	chr11	-	1941	10	NNC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGATTGCATGGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51526723	51514497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526423
ENSMUSG00000001054.10_51514498_51526723_7	chr11	-	1940	10	NNC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGATTGCATGGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51526723	51514497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518845_51520302_51520489_51526416
ENSMUSG00000001054.10_51514498_51526723_8	chr11	-	1941	10	NNC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGATTGCATGGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51526723	51514497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_51514974_51515055_51515211_51515308_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
ENSMUSG00000001056.4_51510598_51514256_1	chr11	+	721	4	FSM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	36	285	36	-285	multi-exon	FALSE	canonical	NA	NA	NA	NA	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTGGCAAGTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	51510597	51514256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_51510805_51510908_51510979_51513311_51513418_51513918
ENSMUSG00000001056.4_51510917_51514399_1	chr11	+	649	3	ISM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	355	142	355	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGGTGAGGAGATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	51510916	51514399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51510979_51513311_51513418_51513918
ENSMUSG00000001056.4_51513311_51514541_1	chr11	+	730	2	ISM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	2749	0	2749	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTCAGTTCTAACGGGT	NA	NA	NA	NA	NA	NA	NA	NA	51513310	51514541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51513418_51513918
ENSMUSG00000001082.13_34790986_34794484_1	chr5	-	1852	13	NNC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTCTTACTATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	34794484	34790985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_34791359_34791474_34791565_34791642_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
ENSMUSG00000001082.13_34790986_34794533_1	chr5	-	1900	13	NNC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTCTTACTATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	34794533	34790985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792037_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
ENSMUSG00000001082.13_34791259_34794533_1	chr5	-	1462	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114331.10	1754	13	23	269	0	-266	multi-exon	TRUE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAGGAGGAGTAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	34794533	34791258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794442
ENSMUSG00000001089.15_136270649_136273486_1	chr4	+	1119	2	FSM	ENSMUSG00000001089.15	ENSMUST00000001116.5	7246	2	2984	3143	2980	-219	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGGCTGGAAACTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	136270648	136273486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_136270830_136272548
ENSMUSG00000001089.15_136273121_136274316_1	chr4	+	1071	2	ISM	ENSMUSG00000001089.15	ENST00000418342.5	7150	3	5452	2346	5452	611	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTTGGTTTTGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	136273120	136274316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_136274129_136274253
ENSMUSG00000001089.15_136273542_136274740_1	chr4	+	1074	2	ISM	ENSMUSG00000001089.15	ENST00000418342.5	7150	3	5873	1922	5873	1035	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTCCCCCAGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	136273541	136274740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_136274129_136274253
ENSMUSG00000001089.15_136273810_136275001_1	chr4	+	1067	2	ISM	ENSMUSG00000001089.15	ENST00000418342.5	7150	3	6141	1661	6141	1296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGACCCCTGTGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	136273809	136275001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_136274129_136274253
ENSMUSG00000001098.16_114503319_114513170_1	chr5	-	1329	6	ISM	ENSMUSG00000001098.16	ENSMUST00000102581.11	3103	7	5399	1691	5357	364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGCGTAGTTGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	114513170	114503318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507089_114508119_114508290_114512956
ENSMUSG00000001098.16_114503319_114513171_1	chr5	-	1323	6	NNC	ENSMUSG00000001098.16	novel	3103	7	NA	NA	5356	364	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGCGTAGTTGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	114513171	114503318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507082_114508119_114508290_114512956
ENSMUSG00000001098.16_114503319_114518544_1	chr5	-	1387	7	FSM	ENSMUSG00000001098.16	ENSMUST00000102581.11	3103	7	25	1691	0	364	multi-exon	FALSE	canonical	NA	NA	NA	NA	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGCGTAGTTGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	114518544	114503318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507089_114508119_114508290_114512956_114513171_114518486
ENSMUSG00000001100.11_78403019_78412997_1	chr11	+	1489	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	0	565	0	-48	multi-exon	FALSE	canonical	NA	NA	NA	NA	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACGGCCATTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	78403018	78412997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ENSMUSG00000001100.11_78403019_78413045_1	chr11	+	1537	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	0	517	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAACTCTTAGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	78403018	78413045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ENSMUSG00000001100.11_78403214_78412997_1	chr11	+	1240	11	FSM	ENSMUSG00000001100.11	ENST00000618887.2	1379	11	91	48	91	-48	multi-exon	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACGGCCATTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	78403213	78412997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_78403299_78404745_78404828_78405967_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ENSMUSG00000001100.11_78403214_78413045_3	chr11	+	1342	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	195	517	91	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAACTCTTAGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	78403213	78413045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ENSMUSG00000001100.11_78404772_78413234_1	chr11	+	1420	10	ISM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	1753	328	1649	189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAGACACGGATTACCC	NA	NA	NA	NA	NA	NA	NA	NA	78404771	78413234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ENSMUSG00000001100.11_78404802_78413314_1	chr11	+	1470	10	ISM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	1783	248	1679	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAACTGTGGGCTTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	78404801	78413314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ENSMUSG00000001100.11_78408379_78413562_1	chr11	+	1497	7	ISM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	5360	0	5256	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	78408378	78413562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ENSMUSG00000001100.11_78408647_78413562_1	chr11	+	1423	5	NNC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	5524	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	78408646	78413562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_78408759_78408898_78409036_78409980_78410132_78411977_78412058_78412619
ENSMUSG00000001100.11_78408647_78413562_2	chr11	+	1417	5	NNC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	5524	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	78408646	78413562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_78408759_78408898_78409036_78409986_78410132_78411977_78412058_78412619
ENSMUSG00000001105.16_78427187_78432563_1	chr11	+	1136	6	NNC	ENSMUSG00000001105.16	novel	1141	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGTGTGCATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	78427186	78432563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_78427403_78429340_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
ENSMUSG00000001105.16_78427187_78432563_2	chr11	+	1136	6	NNC	ENSMUSG00000001105.16	novel	1141	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGTGTGCATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	78427186	78432563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_78427398_78429335_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
ENSMUSG00000001119.8_76545084_76546829_1	chr10	-	996	3	ISM	ENSMUSG00000001119.8	ENSMUST00000001147.5	4100	35	15173	458	15173	-458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACCATCACTGCAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	76546829	76545083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76546016_76546179_76546210_76546795
ENSMUSG00000001119.8_76545136_76546887_1	chr10	-	1002	3	ISM	ENSMUSG00000001119.8	ENSMUST00000001147.5	4100	35	15115	510	15115	-510	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCCATCTCGTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	76546887	76545135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76546016_76546179_76546210_76546795
ENSMUSG00000001119.8_76545276_76547223_1	chr10	-	1055	4	ISM	ENSMUSG00000001119.8	ENSMUST00000001147.5	4100	35	14779	650	14779	-650	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAAGGGAACGCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	76547223	76545275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116
ENSMUSG00000001119.8_76545414_76547442_1	chr10	-	1028	5	ISM	ENSMUSG00000001119.8	ENSMUST00000001147.5	4100	35	14560	788	14560	-788	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGGTGGCACTGGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	76547442	76545413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408
ENSMUSG00000001119.8_76545568_76548149_1	chr10	-	998	6	ISM	ENSMUSG00000001119.8	ENSMUST00000001147.5	4100	35	13853	942	13853	-942	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGGTGGGACCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	76548149	76545567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101
ENSMUSG00000001119.8_76545946_76550538_1	chr10	-	995	12	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	11464	-1320	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAACCACCAAGGTCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	76550538	76545945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549014_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491
ENSMUSG00000001119.8_76546920_76552595_1	chr10	-	1007	14	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	9407	-2294	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATGTCATTTCCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	76552595	76546919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549014_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552
ENSMUSG00000001119.8_76547231_76553283_1	chr10	-	999	16	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	8719	-2605	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCTACTCCCACCCACACA	NA	NA	NA	NA	NA	NA	NA	NA	76553283	76547230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76547301_76547408_76547519_76548101_76548236_76549014_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233
ENSMUSG00000001119.8_76547409_76553948_1	chr10	-	1061	17	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	8054	-2783	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGCATCCCCAAGATC	NA	NA	NA	NA	NA	NA	NA	NA	76553948	76547408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76547519_76548101_76548236_76549014_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892
ENSMUSG00000001119.8_76552552_76559323_1	chr10	-	1017	15	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	2679	-7926	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCGTGCCTTGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	76559323	76552551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556877_76557236_76557366_76557649_76557810_76559209
ENSMUSG00000001119.8_76554227_76561741_1	chr10	-	968	11	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	261	-9601	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGGTCGACGGCATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	76561741	76554226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556877_76557236_76557366_76557649_76557810_76559209_76559411_76560772_76560903_76561653
ENSMUSG00000001120.16_76598204_76617700_1	chr10	-	551	6	ISM	ENSMUSG00000001120.16	ENST00000449640.5	1164	13	19050	-130	19050	112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGATAGTGCGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	76617700	76598203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665
ENSMUSG00000001120.16_76598334_76621048_1	chr10	-	503	7	ISM	ENSMUSG00000001120.16	ENSMUST00000105411.9	2544	19	176673	640	15702	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACTCTAACCTACCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	76621048	76598333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620973
ENSMUSG00000001120.16_76598334_76621050_1	chr10	-	569	7	NNC	ENSMUSG00000001120.16	novel	1164	13	NA	NA	15700	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACTCTAACCTACCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	76621050	76598333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606098_76606154_76606794_76606871_76617665_76617708_76620904
ENSMUSG00000001120.16_76598334_76621050_2	chr10	-	574	7	ISM	ENSMUSG00000001120.16	ENST00000449640.5	1164	13	15700	0	15700	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACTCTAACCTACCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	76621050	76598333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620904
ENSMUSG00000001120.16_76598334_76633698_1	chr10	-	774	9	NIC	ENSMUSG00000001120.16	novel	1164	13	NA	NA	3052	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACTCTAACCTACCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	76633698	76598333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606794_76606871_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628
ENSMUSG00000001120.16_76598346_76624256_1	chr10	-	592	8	ISM	ENSMUSG00000001120.16	ENST00000449640.5	1164	13	12494	12	12494	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGGGATGGGTGCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	76624256	76598345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620904_76621049_76624224
ENSMUSG00000001120.16_76599139_76624353_1	chr10	-	522	7	ISM	ENSMUSG00000001120.16	ENSMUST00000105411.9	2544	19	173368	1445	12397	-805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGGGTCGTCAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	76624353	76599138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620973_76621049_76624224
ENSMUSG00000001120.16_76599139_76624355_1	chr10	-	588	7	NNC	ENSMUSG00000001120.16	novel	1164	13	NA	NA	12395	-805	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGGGTCGTCAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	76624355	76599138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76599226_76603697_76603751_76606098_76606154_76606794_76606871_76617665_76617708_76620904_76621049_76624224
ENSMUSG00000001120.16_76599139_76625602_1	chr10	-	622	8	ISM	ENSMUSG00000001120.16	ENST00000449640.5	1164	13	11148	805	11148	-805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGGGTCGTCAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	76625602	76599138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620904_76621049_76624224_76624354_76625571
ENSMUSG00000001120.16_76599139_76636622_1	chr10	-	788	10	NNC	ENSMUSG00000001120.16	novel	2544	19	NA	NA	128	-805	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGGGTCGTCAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	76636622	76599138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76599226_76603697_76603751_76606794_76606871_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76636578
ENSMUSG00000001120.16_76599139_76636662_1	chr10	-	837	11	NIC	ENSMUSG00000001120.16	novel	2544	19	NA	NA	88	-805	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGGGTCGTCAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	76636662	76599138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_-_76599226_76603697_76603751_76606794_76606871_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593
ENSMUSG00000001120.16_76603698_76625703_1	chr10	-	567	7	ISM	ENSMUSG00000001120.16	ENSMUST00000105411.9	2544	19	172018	6004	11047	-5364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATACCCCCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	76625703	76603697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620973_76621049_76624224_76624354_76625571
ENSMUSG00000001120.16_76603698_76625705_1	chr10	-	638	7	ISM	ENSMUSG00000001120.16	ENST00000449640.5	1164	13	11045	5364	11045	-5364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATACCCCCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	76625705	76603697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620904_76621049_76624224_76624354_76625571
ENSMUSG00000001120.16_76606092_76633698_1	chr10	-	655	7	ISM	ENSMUSG00000001120.16	ENST00000449640.5	1164	13	3052	7758	3052	-7758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	673	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGACCACAGGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	76633698	76606091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76606154_76606794_76606871_76617665_76617708_76620904_76621049_76624224_76624354_76625571_76625704_76633628
ENSMUSG00000001120.16_76606794_76636720_1	chr10	-	749	7	NNC	ENSMUSG00000001120.16	novel	2544	19	NA	NA	30	-8460	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTACCCAGCTGCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	76636720	76606793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76606871_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76636543
ENSMUSG00000001120.16_76617662_76634493_1	chr10	-	601	6	ISM	ENSMUSG00000001120.16	ENST00000449640.5	1164	13	2257	19328	2257	-19328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCACTCTGTCCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	76634493	76617661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76617708_76620904_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460
ENSMUSG00000001120.16_76620992_76636665_1	chr10	-	564	7	ISM	ENSMUSG00000001120.16	ENST00000449640.5	1164	13	85	22658	85	-22658	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGCAGGTGGTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	76636665	76620991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593
ENSMUSG00000001123.16_78853800_78875750_1	chr11	-	1492	10	NNC	ENSMUSG00000001123.16	novel	1520	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGATGGCTGGCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	78875750	78853799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_78854368_78856517_78856681_78856823_78856913_78857702_78857745_78858269_78858321_78858823_78858854_78862142_78862254_78863813_78864016_78867438_78867528_78875603
ENSMUSG00000001123.16_78853800_78875750_3	chr11	-	1491	10	NNC	ENSMUSG00000001123.16	novel	1520	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGATGGCTGGCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	78875750	78853799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_78854368_78856517_78856681_78856823_78856913_78857702_78857745_78858276_78858321_78858823_78858860_78862142_78862254_78863813_78864016_78867438_78867528_78875603
ENSMUSG00000001123.16_78854221_78863830_1	chr11	-	666	5	FSM	ENSMUSG00000001123.16	ENST00000583322.5	868	5	187	15	187	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGTCTCTGGCCTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	78863830	78854220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_78854368_78856517_78856681_78856823_78856997_78862087_78862254_78863813
ENSMUSG00000001123.16_78854221_78863831_1	chr11	-	504	4	FSM	ENSMUSG00000001123.16	ENST00000581545.5	705	4	186	15	186	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGTCTCTGGCCTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	78863831	78854220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_78854368_78856823_78856997_78862087_78862254_78863813
ENSMUSG00000001123.16_78854221_78863884_1	chr11	-	720	5	FSM	ENSMUSG00000001123.16	ENST00000583322.5	868	5	133	15	133	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGTCTCTGGCCTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	78863884	78854220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_78854368_78856517_78856681_78856823_78856997_78862087_78862254_78863813
ENSMUSG00000001123.16_78854221_78863903_1	chr11	-	576	4	FSM	ENSMUSG00000001123.16	ENST00000581545.5	705	4	114	15	114	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGTCTCTGGCCTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	78863903	78854220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_78854368_78856823_78856997_78862087_78862254_78863813
ENSMUSG00000001123.16_78854323_78863934_1	chr11	-	668	5	FSM	ENSMUSG00000001123.16	ENST00000583322.5	868	5	83	117	83	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCAACACATGTGTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	78863934	78854322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_78854368_78856517_78856681_78856823_78856997_78862087_78862254_78863813
ENSMUSG00000001127.13_20714828_20724027_1	chrX	+	1338	11	ISM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	46	2731	11	-2731	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCCTCACATCTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	20714827	20724027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850
ENSMUSG00000001127.13_20716243_20724696_1	chrX	+	1341	12	ISM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	1461	2062	1426	-2062	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGTGGAGTGGGGCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	20716242	20724696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632
ENSMUSG00000001127.13_20716504_20725052_1	chrX	+	1369	12	ISM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	1722	1706	1687	-1706	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTCTATGAGCTCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	20716503	20725052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980
ENSMUSG00000001127.13_20717965_20726267_1	chrX	+	1359	12	ISM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	3183	491	3148	-491	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCCTCCGAACCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	20717964	20726267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ENSMUSG00000001127.13_20718196_20726447_1	chrX	+	1425	11	ISM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	3414	311	3379	-311	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTCAGGATTCCCTATC	NA	NA	NA	NA	NA	NA	NA	NA	20718195	20726447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ENSMUSG00000001127.13_20719954_20726736_1	chrX	+	1434	8	ISM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	5172	22	5137	-22	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCACAGAATTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	20719953	20726736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ENSMUSG00000001127.13_20720000_20726736_1	chrX	+	1388	8	ISM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	5218	22	5183	-22	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCACAGAATTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	20719999	20726736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ENSMUSG00000001131.12_20736460_20740972_1	chrX	+	824	6	NNC	ENSMUSG00000001131.12	novel	833	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	20736459	20740972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_20736564_20737269_20737402_20739015_20739096_20739288_20739416_20739606_20739725_20740709
ENSMUSG00000001131.12_20736460_20740972_2	chrX	+	821	6	NNC	ENSMUSG00000001131.12	novel	883	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	20736459	20740972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_20736564_20737272_20737402_20739022_20739096_20739288_20739416_20739606_20739732_20740709
ENSMUSG00000001150.8_76305989_76318628_1	chr10	+	2048	7	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	126	32955	126	-32955	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCGCACCCGGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	76305988	76318628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457
ENSMUSG00000001150.8_76306518_76324237_1	chr10	+	2040	10	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	655	27346	655	-27346	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTCCCCCTGGATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	76306517	76324237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175
ENSMUSG00000001150.8_76306786_76325334_1	chr10	+	2037	11	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	923	26249	923	-26249	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATAAGTACGTTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	76306785	76325334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168
ENSMUSG00000001150.8_76307391_76328762_1	chr10	+	2047	13	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	1528	22821	1528	-22821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGAAGTTTCCATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	76307390	76328762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694
ENSMUSG00000001150.8_76312371_76329334_1	chr10	+	2066	13	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	6508	22249	6508	-22249	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGACAGAGTGTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	76312370	76329334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263
ENSMUSG00000001150.8_76313580_76335304_1	chr10	+	2053	13	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	7717	16279	7717	-16279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGCTCGGAAGAAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	76313579	76335304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289
ENSMUSG00000001150.8_76316952_76336964_1	chr10	+	2023	13	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	11089	14619	11089	-14619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCCGTCATTCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	76316951	76336964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895
ENSMUSG00000001150.8_76319099_76340109_1	chr10	+	2054	14	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	13236	11474	13236	-11474	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGCAGAGGAGGAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	76319098	76340109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996
ENSMUSG00000001150.8_76320571_76340514_1	chr10	+	2049	14	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	14708	11069	14708	-11069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGAGATTCCTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	76320570	76340514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463
ENSMUSG00000001150.8_76324188_76342194_1	chr10	+	2067	14	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	18325	9389	18325	-9389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGTTCAGTATGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	76324187	76342194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131
ENSMUSG00000001150.8_76325267_76342441_1	chr10	+	2067	13	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	19404	9142	19404	-9142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCACCAGAGCATCTAGCG	NA	NA	NA	NA	NA	NA	NA	NA	76325266	76342441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131
ENSMUSG00000001150.8_76325324_76342493_1	chr10	+	2062	13	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	19461	9090	19461	-9090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACAGATGGACCTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	76325323	76342493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131
ENSMUSG00000001150.8_76325754_76343215_1	chr10	+	2044	13	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	19891	8368	19891	-8368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACCTGCTGTGCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	76325753	76343215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123
ENSMUSG00000001150.8_76328707_76344235_1	chr10	+	2053	12	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	22844	7348	22844	-7348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGAACTGCAGCTGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	76328706	76344235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131
ENSMUSG00000001150.8_76329322_76346996_1	chr10	+	2044	12	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	23459	4587	23459	-4587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCTCCTGGCACAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	76329321	76346996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853
ENSMUSG00000001150.8_76332269_76348299_1	chr10	+	2070	12	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	26406	3284	26406	-3284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGAGTCAACTCGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	76332268	76348299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251
ENSMUSG00000001150.8_76332315_76348347_1	chr10	+	2072	12	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	26452	3236	26452	-3236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCTGATTCTATCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	76332314	76348347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251
ENSMUSG00000001150.8_76335407_76351583_1	chr10	+	2095	12	ISM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	29544	0	29544	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGACGGATCTCTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	76335406	76351583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348413_76351428
ENSMUSG00000001155.14_76415650_76423222_1	chr10	+	948	8	ISM	ENSMUSG00000001155.14	ENST00000397743.1	1192	10	36	1898	36	-1898	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGGAGCTGGCCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	76415649	76423222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76415706_76415823_76416004_76417128_76417267_76417336_76417469_76419644_76419707_76420003_76420134_76420365_76420528_76423134
ENSMUSG00000001155.14_76415657_76423225_1	chr10	+	944	8	ISM	ENSMUSG00000001155.14	ENST00000397743.1	1192	10	43	1895	43	-1895	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGCTGGCCCACTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	76415656	76423225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76415706_76415823_76416004_76417128_76417267_76417336_76417469_76419644_76419707_76420003_76420134_76420365_76420528_76423134
ENSMUSG00000001155.14_76415822_76423999_1	chr10	+	1041	8	ISM	ENSMUSG00000001155.14	ENST00000397743.1	1192	10	208	1121	208	-1121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1627	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCAGATGTGATGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	76415821	76423999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76416004_76417128_76417267_76417336_76417469_76419644_76419707_76420003_76420134_76420365_76420528_76423134_76423274_76423903
ENSMUSG00000001155.14_76415931_76425088_1	chr10	+	954	9	NNC	ENSMUSG00000001155.14	novel	1192	10	NA	NA	317	-32	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1015	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCCAAGACTCAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	76415930	76425088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_76416004_76417128_76417267_76417336_76417469_76419644_76419707_76420003_76420134_76420365_76420528_76423134_76423274_76423910_76424000_76425059
ENSMUSG00000001155.14_76415949_76425089_1	chr10	+	944	9	ISM	ENSMUSG00000001155.14	ENST00000397743.1	1192	10	335	31	335	-31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCAAGACTCAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	76415948	76425089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76416004_76417128_76417267_76417336_76417469_76419644_76419707_76420003_76420134_76420365_76420528_76423134_76423274_76423903_76424000_76425059
ENSMUSG00000001155.14_76417127_76425120_1	chr10	+	917	8	NNC	ENSMUSG00000001155.14	novel	1192	10	NA	NA	1513	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCCTAGAAGCCCGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	76417126	76425120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_76417267_76417336_76417469_76419644_76419707_76420003_76420134_76420365_76420523_76423134_76423274_76423903_76424000_76425059
ENSMUSG00000001155.14_76417127_76425120_2	chr10	+	914	8	NNC	ENSMUSG00000001155.14	novel	1192	10	NA	NA	1513	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCCTAGAAGCCCGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	76417126	76425120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_76417267_76417336_76417469_76419644_76419707_76420011_76420134_76420365_76420528_76423134_76423274_76423903_76424000_76425059
ENSMUSG00000001156.10_86624471_86630181_1	chr6	-	3866	3	ISM	ENSMUSG00000001156.10	ENSMUST00000001184.10	4666	6	15962	447	15962	-447	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGAATCAGGAAGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	86630181	86624470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_86628062_86628423_86628584_86630066
ENSMUSG00000001157.14_86669262_86677601_1	chr6	-	968	3	ISM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	32764	512	32621	-512	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAATAAACTTGAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	86677601	86669261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_86670034_86674430_86674519_86677493
ENSMUSG00000001157.14_86669366_86681550_1	chr6	-	972	4	ISM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	28815	616	28672	-616	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTCTTTTTTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	86681550	86669365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480
ENSMUSG00000001157.14_86669550_86687593_1	chr6	-	961	6	ISM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	22772	800	22629	-800	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTTTAAGTGGCCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	86687593	86669549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496
ENSMUSG00000001157.14_86669743_86691241_1	chr6	-	985	8	ISM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	19124	993	18981	-993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAAACCATGTTAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	86691241	86669742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156
ENSMUSG00000001157.14_86669978_86698384_1	chr6	-	991	11	ISM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	11981	1228	11838	-1228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAACTTCTTGTATATAT	NA	NA	NA	NA	NA	NA	NA	NA	86698384	86669977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322
ENSMUSG00000001157.14_86677569_86703128_1	chr6	-	979	11	ISM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	7237	8819	7094	-8819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAACGCAATACGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	86703128	86677568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054
ENSMUSG00000001157.14_86684385_86709973_1	chr6	-	963	10	ISM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	392	15635	249	12807	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATGCTACATCATAG	NA	NA	NA	NA	NA	NA	NA	NA	86709973	86684384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ENSMUSG00000001157.14_86687520_86710079_1	chr6	-	976	9	ISM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	286	18770	143	9672	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGATTCTCTGGTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	86710079	86687519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ENSMUSG00000001157.14_86687570_86710222_1	chr6	-	1069	9	ISM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	143	18820	0	9622	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGCTACAGTACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	86710222	86687569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ENSMUSG00000001158.14_86652133_86658685_1	chr6	-	688	4	ISM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	2819	0	1274	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGACTTGTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	86658685	86652132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572
ENSMUSG00000001158.14_86652387_86659899_1	chr6	-	431	4	FSM	ENSMUSG00000001158.14	ENST00000409116.5	504	4	60	13	60	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTATTTATGACACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	86659899	86652386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_86652563_86657888_86657969_86658572_86658686_86659837
ENSMUSG00000001158.14_86652387_86659899_2	chr6	-	429	4	NNC	ENSMUSG00000001158.14	novel	504	4	NA	NA	60	-13	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTATTTATGACACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	86659899	86652386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_86652563_86657888_86657969_86658572_86658686_86659839
ENSMUSG00000001158.14_86652387_86659899_3	chr6	-	430	4	NNC	ENSMUSG00000001158.14	novel	504	4	NA	NA	60	-13	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTATTTATGACACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	86659899	86652386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_86652563_86657889_86657969_86658572_86658686_86659837
ENSMUSG00000001158.14_86652387_86659899_4	chr6	-	429	4	NNC	ENSMUSG00000001158.14	novel	504	4	NA	NA	60	-13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTATTTATGACACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	86659899	86652386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_86652563_86657888_86657967_86658572_86658686_86659837
ENSMUSG00000001158.14_86652387_86661473_1	chr6	-	600	6	FSM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	31	254	31	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTATTTATGACACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	86661473	86652386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
ENSMUSG00000001173.16_47005352_47020771_1	chrX	+	549	6	ISM	ENSMUSG00000001173.16	ENSMUST00000115020.8	3210	19	4037	25198	3498	-25198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATCCTCACAAAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	47005351	47020771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660
ENSMUSG00000001173.16_47020470_47025057_1	chrX	+	574	5	ISM	ENSMUSG00000001173.16	ENSMUST00000115020.8	3210	19	19155	20912	18616	-20912	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAACTGGAATCATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	47020469	47025057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966
ENSMUSG00000001173.16_47020664_47025255_1	chrX	+	571	5	ISM	ENSMUSG00000001173.16	ENSMUST00000115020.8	3210	19	19349	20714	18810	-20714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTGGAAGAGTTCGAACG	NA	NA	NA	NA	NA	NA	NA	NA	47020663	47025255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177
ENSMUSG00000001173.16_47020727_47025324_1	chrX	+	577	5	ISM	ENSMUSG00000001173.16	ENSMUST00000115020.8	3210	19	19412	20645	18873	-20645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAATCAGACTGTCCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	47020726	47025324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177
ENSMUSG00000001173.16_47022285_47027253_1	chrX	+	566	5	ISM	ENSMUSG00000001173.16	ENSMUST00000115020.8	3210	19	20970	18716	20431	-18716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGCTTCATAAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	47022284	47027253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175
ENSMUSG00000001173.16_47023735_47030041_1	chrX	+	575	5	ISM	ENSMUSG00000001173.16	ENSMUST00000115020.8	3210	19	22420	15928	21881	-15928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCGTTCCCACGTACA	NA	NA	NA	NA	NA	NA	NA	NA	47023734	47030041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985
ENSMUSG00000001173.16_47025217_47035968_1	chrX	+	596	5	ISM	ENSMUSG00000001173.16	ENSMUST00000115020.8	3210	19	23902	10001	23363	-10001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGAACTTAGCAGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	47025216	47035968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879
ENSMUSG00000001173.16_47035916_47049417_1	chrX	+	565	4	ISM	ENSMUSG00000001173.16	ENST00000357121.5	4916	22	34062	5328	-13250	3448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTTGTTCAAATATGCA	NA	NA	NA	NA	NA	NA	NA	NA	47035915	47049417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47035991_47036583_47036750_47037001_47037238_47049329
ENSMUSG00000001173.16_47036661_47051041_1	chrX	+	612	5	ISM	ENSMUSG00000001173.16	ENST00000357121.5	4916	22	34807	3704	-12505	-3599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGATGTCTTGACTCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	47036660	47051041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956
ENSMUSG00000001173.16_47037057_47052078_1	chrX	+	572	5	ISM	ENSMUSG00000001173.16	ENST00000357121.5	4916	22	35203	2667	-12109	-2562	internal_fragment	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACTCTTAAAATTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	47037056	47052078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017
ENSMUSG00000001173.16_47037167_47052394_1	chrX	+	571	6	ISM	ENSMUSG00000001173.16	ENST00000357121.5	4916	22	35313	2351	-11999	-2246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATGACCGCCAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	47037166	47052394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ENSMUSG00000001173.16_47049385_47052519_1	chrX	+	570	5	FSM	ENSMUSG00000001173.16	ENSMUST00000115013.2	2910	5	219	2121	219	-2121	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATCTGAAAAGTTATCACA	NA	NA	NA	NA	NA	NA	NA	NA	47049384	47052519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ENSMUSG00000001173.16_47050978_47052700_1	chrX	+	583	3	ISM	ENSMUSG00000001173.16	ENSMUST00000115013.2	2910	5	1812	1940	1812	-1940	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAAGAGGTCTGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	47050977	47052700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47051085_47052017_47052130_47052336
ENSMUSG00000001173.16_47051042_47052758_1	chrX	+	577	3	ISM	ENSMUSG00000001173.16	ENSMUST00000115013.2	2910	5	1876	1882	1876	-1882	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCCTCATGATTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	47051041	47052758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47051085_47052017_47052130_47052336
ENSMUSG00000001175.17_100165788_100172450_1	chr12	+	559	4	NNC	ENSMUSG00000001175.17	novel	1070	6	NA	NA	0	-598	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGCAGATATTGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	100165787	100172450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_100166002_100169833_100169978_100171871_100171979_100172356
ENSMUSG00000001175.17_100165788_100172456_1	chr12	+	570	5	ISM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	94	3617	0	-592	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATATTGATGGCGACGGA	NA	NA	NA	NA	NA	NA	NA	NA	100165787	100172456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356
ENSMUSG00000001175.17_100165932_100172754_1	chr12	+	558	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	238	3319	144	-294	multi-exon	FALSE	canonical	NA	NA	NA	NA	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	100165931	100172754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUSG00000001175.17_100165955_100172789_1	chr12	+	570	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	261	3284	167	-259	multi-exon	FALSE	canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGTTTGTATCTAGCG	NA	NA	NA	NA	NA	NA	NA	NA	100165954	100172789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUSG00000001175.17_100166403_100175826_1	chr12	+	3748	6	FSM	ENSMUSG00000001175.17	ENSMUST00000001204.8	3987	6	0	239	0	-239	multi-exon	FALSE	canonical	NA	NA	NA	NA	21102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCGACGATGTTCATTAA	NA	NA	NA	NA	NA	NA	NA	NA	100166402	100175826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_100166565_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUSG00000001175.17_100166506_100175892_1	chr12	+	3711	6	FSM	ENSMUSG00000001175.17	ENSMUST00000001204.8	3987	6	103	173	103	-173	multi-exon	FALSE	canonical	NA	NA	NA	NA	21803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCACTGTGGCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	100166505	100175892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_100166565_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUSG00000001175.17_100169926_100176065_1	chr12	+	3702	4	ISM	ENSMUSG00000001175.17	ENSMUST00000001204.8	3987	6	3523	0	3523	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTCTTAACTGTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	100169925	100176065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUSG00000001175.17_100172431_100173028_1	chr12	+	432	2	ISM	ENSMUSG00000001175.17	ENST00000447653.8	1070	6	6643	20	6028	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCAGGCATTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	100172430	100173028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_100172493_100172658
ENSMUSG00000001211.16_78108578_78134032_1	chr10	-	2497	9	FSM	ENSMUSG00000001211.16	ENSMUST00000105389.8	3678	9	0	1181	0	867	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGCTTGTTAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	78134032	78108577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78133658
ENSMUSG00000001229.10_56494167_56497064_1	chr17	-	625	4	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	28825	350	28825	-350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCAATTCCATCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	56497064	56494166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989
ENSMUSG00000001229.10_56494298_56497745_1	chr17	-	633	5	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	28144	481	28144	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTTGCTTGCTGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	56497745	56494297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684
ENSMUSG00000001229.10_56494418_56498055_1	chr17	-	641	6	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	27834	601	27834	-601	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCATTACGAGGTGACGC	NA	NA	NA	NA	NA	NA	NA	NA	56498055	56494417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013
ENSMUSG00000001229.10_56496328_56501448_1	chr17	-	617	5	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	24441	2511	24441	-2511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTAAGCACCCACTCG	NA	NA	NA	NA	NA	NA	NA	NA	56501448	56496327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415
ENSMUSG00000001229.10_56496378_56501527_1	chr17	-	646	5	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	24362	2561	24362	-2561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGGCTATGAGGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	56501527	56496377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415
ENSMUSG00000001229.10_56496998_56501955_1	chr17	-	622	5	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	23934	3181	23934	-3181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCAAGGTGGGTTTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	56501955	56496997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907
ENSMUSG00000001229.10_56497061_56502019_1	chr17	-	623	5	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	23870	3244	23870	-3244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCATGGCTGGTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	56502019	56497060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907
ENSMUSG00000001229.10_56497693_56503154_1	chr17	-	641	5	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	22735	3876	22735	-3876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAATGGTGAGTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	56503154	56497692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087
ENSMUSG00000001229.10_56497809_56506038_1	chr17	-	605	6	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	19851	3992	19851	-3992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGCATCAAATACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	56506038	56497808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971
ENSMUSG00000001229.10_56498105_56506289_1	chr17	-	621	6	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	19600	4288	19600	-4288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCAGCTCTACGGCATGA	NA	NA	NA	NA	NA	NA	NA	NA	56506289	56498104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255
ENSMUSG00000001229.10_56501460_56506408_1	chr17	-	641	5	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	19481	7643	19481	-7643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAAGCAACCACGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	56506408	56501459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255
ENSMUSG00000001229.10_56501917_56507683_1	chr17	-	666	5	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	18206	8100	18206	-8100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGCCAGGTGTGCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	56507683	56501916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582
ENSMUSG00000001229.10_56503118_56511224_1	chr17	-	607	6	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	14665	9301	14665	-9301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGGTCTTGTCGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	56511224	56503117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171
ENSMUSG00000001229.10_56506044_56512256_1	chr17	-	624	6	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	13633	12227	13633	-12227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTACAGGGTCACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	56512256	56506043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193
ENSMUSG00000001229.10_56506254_56512483_1	chr17	-	617	6	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	13406	12437	13406	-12437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGAGTGCCAGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	56512483	56506253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452
ENSMUSG00000001229.10_56506369_56512600_1	chr17	-	619	6	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	13289	12552	13289	-12552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCATCCCGGCCGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	56512600	56506368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452
ENSMUSG00000001229.10_56507616_56512796_1	chr17	-	642	6	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	13093	13799	13093	-13799	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCGGGCTGGCTGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	56512796	56507615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696
ENSMUSG00000001229.10_56512236_56518669_1	chr17	-	618	5	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	7220	18419	7220	-18419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCACTGGGTGCTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	56518669	56512235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579
ENSMUSG00000001229.10_56512497_56518795_1	chr17	-	628	4	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	7094	18680	7094	-18680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGAGACTGGGGAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	56518795	56512496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56512622_56512696_56512871_56513776_56513890_56518579
ENSMUSG00000001229.10_56512704_56525763_1	chr17	-	610	5	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	126	18887	126	-18887	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATGGTGAGGCACGACC	NA	NA	NA	NA	NA	NA	NA	NA	56525763	56512703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ENSMUSG00000001248.16_30829552_30843137_2	chr7	-	2360	17	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	7302	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	30843137	30829551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065
ENSMUSG00000001248.16_30829667_30843137_1	chr7	-	2245	17	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	7302	-115	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTATTTTGCCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	30843137	30829666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065
ENSMUSG00000001248.16_30829926_30850378_1	chr7	-	2205	18	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	61	-374	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCTGAGGACTCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	30850378	30829925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ENSMUSG00000001248.16_30829926_30850507_2	chr7	-	2334	18	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	0	-374	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCTGAGGACTCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	30850507	30829925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ENSMUSG00000001249.15_30798158_30801999_1	chr7	-	842	5	ISM	ENSMUSG00000001249.15	ENSMUST00000039435.15	1743	13	8423	8	8423	-8	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGGTCTCTGCGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	30801999	30798157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30798499_30798639_30798805_30798930_30799074_30799230_30799327_30801902
ENSMUSG00000001249.15_30798375_30803055_1	chr7	-	850	6	ISM	ENSMUSG00000001249.15	ENST00000597419.1	1111	7	11103	206	7367	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGGGCCTCACATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	30803055	30798374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30798499_30798639_30798805_30798930_30799074_30799230_30799327_30801902_30802094_30802924
ENSMUSG00000001249.15_30798474_30814147_1	chr7	-	795	7	FSM	ENSMUSG00000001249.15	ENST00000597419.1	1111	7	11	305	11	-305	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCAGCCCTGATCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	30814147	30798473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30798499_30798639_30798805_30798930_30799074_30799230_30799327_30801902_30802094_30802924_30803055_30814102
ENSMUSG00000001260.11_70911247_70935542_1	chr5	-	891	4	ISM	ENSMUSG00000001260.11	ENSMUST00000031119.6	4771	9	64418	2857	37907	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGTGACTAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	70935542	70911246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_70911635_70931613_70931826_70934460_70934614_70935404
ENSMUSG00000001260.11_70911474_70939661_1	chr5	-	820	6	ISM	ENSMUSG00000001260.11	ENSMUST00000031119.6	4771	9	60299	3084	33788	-226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGATACACATACGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	70939661	70911473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_70911635_70931613_70931826_70934460_70934614_70935404_70935543_70937992_70938076_70939588
ENSMUSG00000001260.11_70911542_70939712_1	chr5	-	803	6	ISM	ENSMUSG00000001260.11	ENSMUST00000031119.6	4771	9	60248	3152	33737	-294	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGCAAAGACTGTACTAG	NA	NA	NA	NA	NA	NA	NA	NA	70939712	70911541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_70911635_70931613_70931826_70934460_70934614_70935404_70935543_70937992_70938076_70939588
ENSMUSG00000001260.11_70911598_70939781_1	chr5	-	816	6	ISM	ENSMUSG00000001260.11	ENSMUST00000031119.6	4771	9	60179	3208	33668	-350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAACAGCATTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	70939781	70911597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_70911635_70931613_70931826_70934460_70934614_70935404_70935543_70937992_70938076_70939588
ENSMUSG00000001260.11_70931609_70952056_1	chr5	-	880	6	ISM	ENSMUSG00000001260.11	ENST00000295452.5	1416	8	21393	20361	21393	-20361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTTAGTTTTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	70952056	70931608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_70931826_70934460_70934614_70935404_70935543_70937992_70938076_70939588_70939810_70951988
ENSMUSG00000001260.11_70931753_70973374_1	chr5	-	811	7	ISM	ENSMUSG00000001260.11	ENST00000295452.5	1416	8	75	20505	75	-20505	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCAATGGATCTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	70973374	70931752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_70931826_70934460_70934614_70935404_70935543_70937992_70938076_70939588_70939810_70951988_70952057_70973299
ENSMUSG00000001260.11_70931796_70973432_1	chr5	-	826	7	ISM	ENSMUSG00000001260.11	ENST00000295452.5	1416	8	17	20548	17	-20548	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTACAATTGCTAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	70973432	70931795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_70931826_70934460_70934614_70935404_70935543_70937992_70938076_70939588_70939810_70951988_70952057_70973299
ENSMUSG00000001270.10_111635795_111636719_1	chr12	-	695	3	ISM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	2053	0	2053	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	111636719	111635794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_111636176_111636258_111636449_111636595
ENSMUSG00000001270.10_111635998_111637692_1	chr12	-	708	5	ISM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	1080	203	1080	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGGCCCTCGCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	111637692	111635997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648
ENSMUSG00000001270.10_111636139_111637919_1	chr12	-	717	6	ISM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	853	344	853	-344	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCCAACGCTGACCGCC	NA	NA	NA	NA	NA	NA	NA	NA	111637919	111636138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858
ENSMUSG00000001270.10_111636319_111638214_1	chr12	-	729	6	ISM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	558	524	558	-524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCACGAGAAGTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	111638214	111636318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199
ENSMUSG00000001270.10_111636388_111638259_1	chr12	-	705	6	ISM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	513	593	513	-593	internal_fragment	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCACATGCCCATCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	111638259	111636387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199
ENSMUSG00000001270.10_111636422_111638326_1	chr12	-	738	6	ISM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	446	627	446	-627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTTCATGTGGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	111638326	111636421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199
ENSMUSG00000001270.10_111637297_111638716_1	chr12	-	731	5	ISM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	56	1502	56	-1502	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCCCCCCCAGTCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	111638716	111637296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
ENSMUSG00000001281.11_102124565_102136006_1	chr15	-	1980	12	FSM	ENSMUSG00000001281.11	ENST00000550743.6	1981	12	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGAAGGGCAGGGCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	102136006	102124564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_102124703_102124906_102125068_102125326_102125533_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102135832
ENSMUSG00000001285.13_102240352_102245630_1	chr15	+	405	4	ISM	ENSMUSG00000001285.13	ENST00000548632.5	893	6	118	600	118	-600	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAGGCACTGGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	102240351	102245630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245535
ENSMUSG00000001285.13_102240352_102246574_1	chr15	+	1272	7	FSM	ENSMUSG00000001285.13	ENSMUST00000113682.9	1480	7	208	0	118	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCTAGGAGTACATAAC	NA	NA	NA	NA	NA	NA	NA	NA	102240351	102246574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ENSMUSG00000001285.13_102240352_102246574_2	chr15	+	1265	7	NNC	ENSMUSG00000001285.13	novel	1480	7	NA	NA	118	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1024	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCTAGGAGTACATAAC	NA	NA	NA	NA	NA	NA	NA	NA	102240351	102246574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_102240382_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ENSMUSG00000001285.13_102240352_102246574_3	chr15	+	1265	7	NNC	ENSMUSG00000001285.13	novel	1480	7	NA	NA	118	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1021	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCTAGGAGTACATAAC	NA	NA	NA	NA	NA	NA	NA	NA	102240351	102246574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_102240389_102240531_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ENSMUSG00000001285.13_102240546_102245832_1	chr15	+	444	4	ISM	ENSMUSG00000001285.13	ENST00000548632.5	893	6	312	398	312	-398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAATCTGAGCTGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	102240545	102245832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102240638_102242636_102242797_102245535_102245659_102245763
ENSMUSG00000001288.16_102143375_102147884_1	chr15	-	1503	3	ISM	ENSMUSG00000001288.16	ENSMUST00000063339.14	2718	8	7051	0	7051	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGGTGTGGATCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	102147884	102143374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102144659_102147239_102147399_102147824
ENSMUSG00000001288.16_102143651_102148380_1	chr15	-	1460	4	ISM	ENSMUSG00000001288.16	ENSMUST00000063339.14	2718	8	6555	276	6555	-276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGCCTCTATTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	102148380	102143650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292
ENSMUSG00000001288.16_102143830_102148655_1	chr15	-	1463	5	ISM	ENSMUSG00000001288.16	ENSMUST00000063339.14	2718	8	6280	455	6280	-455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTACTTCTGTCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	102148655	102143829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562
ENSMUSG00000001288.16_102144127_102150326_1	chr15	-	1432	7	ISM	ENSMUSG00000001288.16	ENSMUST00000063339.14	2718	8	4609	752	4609	-752	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGCTTGGGCCTCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	102150326	102144126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270
ENSMUSG00000001288.16_102144184_102150388_1	chr15	-	1437	7	ISM	ENSMUSG00000001288.16	ENSMUST00000063339.14	2718	8	4547	809	4547	-809	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACAGGCTCCCGACGCAA	NA	NA	NA	NA	NA	NA	NA	NA	102150388	102144183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270
ENSMUSG00000001288.16_102144406_102154678_1	chr15	-	1430	8	FSM	ENSMUSG00000001288.16	ENSMUST00000063339.14	2718	8	257	1031	257	-1031	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCCAGTGACTGGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	102154678	102144405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102154494
ENSMUSG00000001288.16_102144488_102154746_1	chr15	-	1416	8	FSM	ENSMUSG00000001288.16	ENSMUST00000063339.14	2718	8	189	1113	189	-1113	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCCCCAACCTGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	102154746	102144487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102154494
ENSMUSG00000001288.16_102144538_102154810_1	chr15	-	1430	8	FSM	ENSMUSG00000001288.16	ENSMUST00000063339.14	2718	8	125	1163	125	-1163	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCTTCCAGTGAGGACG	NA	NA	NA	NA	NA	NA	NA	NA	102154810	102144537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102154494
ENSMUSG00000001288.16_102149531_102164974_1	chr15	-	649	4	ISM	ENSMUSG00000001288.16	ENSMUST00000043172.15	2953	10	978	6158	978	-6156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTACAAAAGTGTTTCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	102164974	102149530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102149635_102150270_102150420_102160853_102161180_102164904
ENSMUSG00000001288.16_102150378_102165817_1	chr15	-	581	4	ISM	ENSMUSG00000001288.16	ENSMUST00000043172.15	2953	10	135	7005	135	-7003	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCCCTCACCCCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	102165817	102150377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102150420_102160853_102161180_102164904_102164975_102165674
ENSMUSG00000001289.13_102234551_102239810_1	chr15	+	557	5	FSM	ENSMUSG00000001289.13	ENST00000549759.2	545	5	-12	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGACCCTTCTTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	102234550	102239810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102234696_102234867_102234971_102236931_102237032_102237146_102237253_102239707
ENSMUSG00000001289.13_102234551_102239810_3	chr15	+	564	6	FSM	ENSMUSG00000001289.13	ENSMUST00000166658.8	1062	6	0	498	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGACCCTTCTTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	102234550	102239810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102234696_102234867_102234971_102235252_102235285_102236956_102237032_102237146_102237253_102239707
ENSMUSG00000001289.13_102236976_102240016_1	chr15	+	471	3	ISM	ENSMUSG00000001289.13	ENSMUST00000165671.8	830	4	2150	-119	2150	119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCCTTATAGAGGTTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	102236975	102240016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102237032_102237146_102237253_102239707
ENSMUSG00000001289.13_102237145_102240038_1	chr15	+	439	2	ISM	ENSMUSG00000001289.13	ENSMUST00000165671.8	830	4	2319	-141	2319	141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTTGGGGACCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	102237144	102240038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102237253_102239707
ENSMUSG00000001289.13_102237176_102240108_1	chr15	+	478	2	ISM	ENSMUSG00000001289.13	ENSMUST00000165671.8	830	4	2350	-211	2350	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGCGGAAGTGAAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	102237175	102240108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102237253_102239707
ENSMUSG00000001289.13_102237232_102240153_1	chr15	+	467	2	ISM	ENSMUSG00000001285.13_ENSMUSG00000001289.13	ENSMUST00000165671.8	830	4	2406	-256	2406	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCCTTGGAGGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	102237231	102240153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102237253_102239707
ENSMUSG00000001305.6_186453175_186468395_1	chr1	-	652	2	ISM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	13160	0	13160	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTATCTTTTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	186468395	186453174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_186453744_186468312
ENSMUSG00000001305.6_186453289_186469882_1	chr1	-	752	3	ISM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	11673	114	11673	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAATCTCTGCTTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	186469882	186453288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_186453744_186468312_186468512_186469784
ENSMUSG00000001313.13_101359001_101364868_2	chr11	+	967	7	FSM	ENSMUSG00000001313.13	ENST00000587250.4	1343	7	-34	410	0	-410	multi-exon	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTACCCTTTCAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	101359000	101364868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101359266_101359758_101359847_101360838_101360949_101361543_101361679_101361883_101362129_101363246_101363321_101364818
ENSMUSG00000001313.13_101359124_101364868_3	chr11	+	844	7	FSM	ENSMUSG00000001313.13	ENST00000587250.4	1343	7	89	410	89	-410	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTACCCTTTCAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	101359123	101364868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101359266_101359758_101359847_101360838_101360949_101361543_101361679_101361883_101362129_101363246_101363321_101364818
ENSMUSG00000001313.13_101359758_101365084_1	chr11	+	919	6	ISM	ENSMUSG00000001313.13	ENST00000587250.4	1343	7	723	194	723	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTAGGATTCTGAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	101359757	101365084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101359847_101360838_101360949_101361543_101361679_101361883_101362129_101363246_101363321_101364818
ENSMUSG00000001313.13_101360887_101362470_1	chr11	+	784	3	ISM	ENSMUSG00000001313.13	ENSMUST00000001347.7	1394	5	1886	209	1852	-209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCTGCCTTCCCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	101360886	101362470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101360949_101361543_101361679_101361883
ENSMUSG00000001333.10_129181424_129202013_1	chr4	+	1612	4	FSM	ENSMUSG00000001333.10	ENST00000373484.4	1692	4	-14	94	2	-94	multi-exon	FALSE	canonical	NA	NA	NA	NA	1495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATCCCAGTCAACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	129181423	129202013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129181582_129187019_129188170_129200134_129200260_129201834
ENSMUSG00000001333.10_129181537_129202107_1	chr4	+	1593	4	FSM	ENSMUSG00000001333.10	ENST00000373484.4	1692	4	99	0	99	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGATGGATGCATCACCA	NA	NA	NA	NA	NA	NA	NA	NA	129181536	129202107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129181582_129187019_129188170_129200134_129200260_129201834
ENSMUSG00000001333.10_129187725_129200438_1	chr4	+	588	3	ISM	ENSMUSG00000001333.10	ENSMUST00000102599.4	2042	5	6315	1914	6287	-1669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAACAGGCTGATGCAC	NA	NA	NA	NA	NA	NA	NA	NA	129187724	129200438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129188170_129200134_129200260_129200420
ENSMUSG00000001333.10_129187788_129200491_1	chr4	+	578	3	ISM	ENSMUSG00000001333.10	ENSMUST00000102599.4	2042	5	6378	1861	6350	-1616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGGTGATCTTTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	129187787	129200491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129188170_129200134_129200260_129200420
ENSMUSG00000001333.10_129187969_129201992_1	chr4	+	561	4	ISM	ENSMUSG00000001333.10	ENSMUST00000102599.4	2042	5	6559	360	6531	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTAGGTTGGCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	129187968	129201992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129188170_129200134_129200260_129200420_129200498_129201834
ENSMUSG00000001333.10_129188053_129202090_1	chr4	+	575	4	ISM	ENSMUSG00000001333.10	ENSMUST00000102599.4	2042	5	6643	262	6615	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCAGCAGAACCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	129188052	129202090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129188170_129200134_129200260_129200420_129200498_129201834
ENSMUSG00000001333.10_129188095_129203075_1	chr4	+	317	4	ISM	ENSMUSG00000001333.10	ENST00000409190.8	2074	5	6673	522	6657	-522	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTTCAAGAATATGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	129188094	129203075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129188170_129200134_129200260_129200420_129200449_129202986
ENSMUSG00000001333.10_129188112_129202135_1	chr4	+	561	4	ISM	ENSMUSG00000001333.10	ENSMUST00000102599.4	2042	5	6702	217	6674	28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATCGTGAAGAATGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	129188111	129202135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129188170_129200134_129200260_129200420_129200498_129201834
ENSMUSG00000001333.10_129200421_129202352_1	chr4	+	595	2	ISM	ENSMUSG00000001333.10	ENSMUST00000102599.4	2042	5	19011	0	18983	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAAACCACTACCA	NA	NA	NA	NA	NA	NA	NA	NA	129200420	129202352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129200498_129201834
ENSMUSG00000001349.6_22010564_22020586_1	chr9	+	2041	7	FSM	ENSMUSG00000001349.6	ENSMUST00000001384.6	2381	7	0	340	0	-340	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCACAGCTGTAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	22010563	22020586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_22010715_22012436_22012559_22015601_22015669_22016665_22016804_22016965_22017077_22019046_22019194_22019281
ENSMUSG00000001349.6_22010564_22020650_1	chr9	+	2105	7	FSM	ENSMUSG00000001349.6	ENSMUST00000001384.6	2381	7	0	276	0	-276	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCTGACAACTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	22010563	22020650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_22010715_22012436_22012559_22015601_22015669_22016665_22016804_22016965_22017077_22019046_22019194_22019281
ENSMUSG00000001349.6_22015602_22020939_1	chr9	+	2121	5	ISM	ENSMUSG00000001349.6	ENSMUST00000001384.6	2381	7	5038	-13	5038	13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATCCCAGGGCTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	22015601	22020939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_22015669_22016665_22016804_22016965_22017077_22019046_22019194_22019281
ENSMUSG00000001349.6_22016663_22020939_1	chr9	+	2057	4	ISM	ENSMUSG00000001349.6	ENSMUST00000001384.6	2381	7	6099	-13	6099	13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATCCCAGGGCTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	22016662	22020939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_22016804_22016965_22017077_22019046_22019194_22019281
ENSMUSG00000001366.15_77988781_77991890_1	chr9	-	696	2	ISM	ENSMUSG00000001366.15	ENSMUST00000085311.13	2155	13	24048	0	23996	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGGATGGCCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	77991890	77988780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_77989371_77991784
ENSMUSG00000001366.15_77989123_77994789_1	chr9	-	719	6	ISM	ENSMUSG00000001366.15	ENSMUST00000085311.13	2155	13	21149	342	21097	-339	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCCTTTAAGAAGAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	77994789	77989122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751
ENSMUSG00000001366.15_78002487_78015638_1	chr9	-	653	7	ISM	ENSMUSG00000001366.15	ENSMUST00000085311.13	2155	13	300	13706	248	308	5prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTCAGATCGTTAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	78015638	78002486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78002542_78003149_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78015572
ENSMUSG00000001376.18_3498422_3600271_1	chr6	+	2830	27	FSM	ENSMUSG00000001376.18	ENSMUST00000170873.10	3687	27	18	839	0	-839	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCTAACTGAGAATGACA	NA	NA	NA	NA	NA	NA	NA	NA	3498421	3600271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127
ENSMUSG00000001376.18_3504903_3602706_1	chr6	+	2755	27	ISM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	6521	825	6481	-609	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTCATATCAATAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	3504902	3602706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ENSMUSG00000001376.18_3516713_3602848_1	chr6	+	2771	26	ISM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	18331	683	18291	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTCCTCATAATTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	3516712	3602848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ENSMUSG00000001376.18_3520208_3602999_1	chr6	+	2763	23	ISM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	21826	532	21786	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATCTTACTCTCATAATT	NA	NA	NA	NA	NA	NA	NA	NA	3520207	3602999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ENSMUSG00000001376.18_3522286_3603103_1	chr6	+	2767	22	ISM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	23904	428	23864	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTTTTGGAGAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	3522285	3603103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ENSMUSG00000001376.18_3522342_3603158_1	chr6	+	2766	22	ISM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	23960	373	23920	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGCATTGCATGAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	3522341	3603158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ENSMUSG00000001376.18_3524091_3603315_1	chr6	+	2857	20	ISM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	25709	216	25669	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTGTGTGAGACTACTA	NA	NA	NA	NA	NA	NA	NA	NA	3524090	3603315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ENSMUSG00000001376.18_3536881_3603531_1	chr6	+	2797	17	ISM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	38499	0	38459	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTCTTTGAATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	3536880	3603531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ENSMUSG00000001380.8_36899581_36906668_1	chr18	-	1584	10	ISM	ENSMUSG00000001380.8	ENST00000438307.6	1449	11	9155	-226	9155	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTGTGTCCTTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	36906668	36899580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572
ENSMUSG00000001380.8_36899743_36915822_1	chr18	-	1632	12	ISM	ENSMUSG00000001380.8	ENSMUST00000001416.8	1989	13	436	162	1	64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACAATGGCCAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	36915822	36899742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732
ENSMUSG00000001380.8_36899897_36916184_1	chr18	-	1599	13	FSM	ENSMUSG00000001380.8	ENSMUST00000001416.8	1989	13	74	316	74	-90	multi-exon	FALSE	canonical	NA	NA	NA	NA	3042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAACGAAAACAAAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	36916184	36899896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915823_36916063
ENSMUSG00000001380.8_36900029_36901167_1	chr18	-	389	2	ISM	ENSMUSG00000001380.8	ENST00000438307.6	1449	11	14656	222	14656	-222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTCCTCTGTTGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	36901167	36900028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36900390_36901139
ENSMUSG00000001380.8_36900080_36901219_1	chr18	-	390	2	ISM	ENSMUSG00000001380.8	ENST00000438307.6	1449	11	14604	273	14604	-273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAACTAGAAGTAGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	36901219	36900079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36900390_36901139
ENSMUSG00000001380.8_36900240_36905436_1	chr18	-	1005	8	ISM	ENSMUSG00000001380.8	ENST00000457527.6	1509	12	10387	433	10387	-433	internal_fragment	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGGCGTCAGACGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	36905436	36900239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905370
ENSMUSG00000001380.8_36900343_36906627_1	chr18	-	957	9	ISM	ENSMUSG00000001380.8	ENST00000457527.6	1509	12	9196	536	9196	-536	internal_fragment	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGTGAGGAGGCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	36906627	36900342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905370_36905437_36906572
ENSMUSG00000001380.8_36901207_36909289_1	chr18	-	944	9	ISM	ENSMUSG00000001380.8	ENST00000457527.6	1509	12	6534	1400	6534	-1400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAGAAGAAGCTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	36909289	36901206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905370_36905437_36906572_36906669_36909229
ENSMUSG00000001380.8_36903549_36915762_1	chr18	-	602	7	ISM	ENSMUSG00000001380.8	ENST00000438307.6	1449	11	61	3742	61	-3742	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACAGGCTGTAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	36915762	36903548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36915732
ENSMUSG00000001383.10_36926929_36932719_1	chr18	+	2305	6	NNC	ENSMUSG00000001383.10	novel	2310	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGACTTTTCTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	36926928	36932719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929556_36929698_36930931
ENSMUSG00000001403.14_164611818_164614827_1	chr2	+	961	5	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	164611817	164614827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_164612005_164613194_164613300_164613773_164613979_164614086_164614147_164614423
ENSMUSG00000001403.14_164611818_164614827_3	chr2	+	957	6	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	164611817	164614827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_164612001_164612286_164612315_164613212_164613300_164613783_164613979_164614086_164614147_164614423
ENSMUSG00000001403.14_164611818_164614827_4	chr2	+	946	5	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	164611817	164614827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_164612008_164613212_164613300_164613773_164613979_164614086_164614147_164614423
ENSMUSG00000001403.14_164611818_164614827_5	chr2	+	954	5	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	164611817	164614827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_164612016_164613212_164613300_164613773_164613979_164614086_164614147_164614423
ENSMUSG00000001403.14_164611951_164614827_1	chr2	+	836	5	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	128	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	164611950	164614827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_164612005_164613186_164613300_164613773_164613979_164614086_164614147_164614423
ENSMUSG00000001403.14_164611951_164614827_2	chr2	+	834	6	FSM	ENSMUSG00000001403.14	ENSMUST00000088248.13	967	6	133	0	128	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	164611950	164614827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_164612001_164612286_164612315_164613212_164613300_164613773_164613979_164614086_164614147_164614423
ENSMUSG00000001403.14_164611951_164614827_3	chr2	+	821	5	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	128	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	164611950	164614827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_164612016_164613212_164613300_164613773_164613979_164614086_164614147_164614423
ENSMUSG00000001403.14_164611951_164614827_4	chr2	+	828	5	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	128	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	164611950	164614827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_164612005_164613194_164613300_164613773_164613979_164614086_164614147_164614423
ENSMUSG00000001403.14_164611951_164614827_5	chr2	+	813	5	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	128	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	164611950	164614827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_164612008_164613212_164613300_164613773_164613979_164614086_164614147_164614423
ENSMUSG00000001415.11_88256536_88261944_1	chr3	+	1416	8	ISM	ENSMUSG00000001415.11	ENSMUST00000001451.11	4448	22	12969	7701	12969	-7701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCGGGCTGCTCATA	NA	NA	NA	NA	NA	NA	NA	NA	88256535	88261944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838
ENSMUSG00000001415.11_88268146_88269645_1	chr3	+	1368	2	ISM	ENSMUSG00000001415.11	ENSMUST00000001451.11	4448	22	24579	0	24579	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	88268145	88269645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88268200_88268331
ENSMUSG00000001416.14_88204495_88228012_1	chr3	+	1449	12	ISM	ENSMUSG00000001416.14	ENSMUST00000168062.8	1943	13	0	802	0	-802	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTCTTTTCTACACTC	NA	NA	NA	NA	NA	NA	NA	NA	88204494	88228012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766
ENSMUSG00000001416.14_88204495_88228355_1	chr3	+	1484	13	FSM	ENSMUSG00000001416.14	ENSMUST00000168062.8	1943	13	0	459	0	-459	multi-exon	FALSE	canonical	NA	NA	NA	NA	2027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATGGTGAGACTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	88204494	88228355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320
ENSMUSG00000001416.14_88212353_88228943_1	chr3	+	1389	9	ISM	ENSMUSG00000001416.14	ENSMUST00000164166.8	1804	12	7872	130	7858	129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGAAGGATCAGGTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	88212352	88228943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ENSMUSG00000001416.14_88216465_88229074_1	chr3	+	1438	8	ISM	ENSMUSG00000001416.14	ENSMUST00000164166.8	1804	12	11984	-1	11970	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTGTCATGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	88216464	88229074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ENSMUSG00000001416.14_88216465_88229074_2	chr3	+	1432	8	NNC	ENSMUSG00000001416.14	novel	1977	14	NA	NA	11970	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1916	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTGTCATGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	88216464	88229074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228326_88228453_88228750
ENSMUSG00000001418.14_88233027_88233556_1	chr3	+	347	2	ISM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	697	5064	638	-2114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAGGCCGCCCTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	88233026	88233556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88233239_88233421
ENSMUSG00000001418.14_88233097_88233774_1	chr3	+	397	3	ISM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	767	4846	708	-1896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGTCTGCCAGTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	88233096	88233774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88233239_88233421_88233620_88233717
ENSMUSG00000001418.14_88233144_88233794_1	chr3	+	370	3	ISM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	814	4826	755	-1876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCCCTGGTTGGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	88233143	88233794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88233239_88233421_88233620_88233717
ENSMUSG00000001418.14_88233208_88233885_1	chr3	+	397	3	ISM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	878	4735	819	-1785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAACGAACGGAACTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	88233207	88233885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88233239_88233421_88233620_88233717
ENSMUSG00000001418.14_88233498_88235179_1	chr3	+	357	3	ISM	ENSMUSG00000001418.14	ENSMUST00000176425.2	960	5	1109	496	1109	-491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTCTTCTCCATCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	88233497	88235179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88233620_88233717_88233937_88235163
ENSMUSG00000001418.14_88233550_88235229_1	chr3	+	355	3	ISM	ENSMUSG00000001418.14	ENSMUST00000176425.2	960	5	1161	446	1161	-441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGGAGCGGGCCCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	88233549	88235229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88233620_88233717_88233937_88235163
ENSMUSG00000001418.14_88233607_88235280_1	chr3	+	349	3	ISM	ENSMUSG00000001418.14	ENSMUST00000176425.2	960	5	1218	395	1218	-390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCACCTTGGCATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	88233606	88235280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88233620_88233717_88233937_88235163
ENSMUSG00000001418.14_88233748_88235341_1	chr3	+	367	2	ISM	ENSMUSG00000001418.14	ENSMUST00000001454.14	1017	5	1359	334	1359	-329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACAACTTCTGTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	88233747	88235341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88233937_88235163
ENSMUSG00000001418.14_88233922_88235625_1	chr3	+	388	3	ISM	ENSMUSG00000001418.14	ENSMUST00000001454.14	1017	5	1533	50	1533	-45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTGCTGCGCCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	88233921	88235625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88233937_88235163_88235421_88235509
ENSMUSG00000001435.16_76890017_76894593_1	chr10	-	629	5	ISM	ENSMUSG00000001435.16	ENSMUST00000105409.8	4791	41	54946	1167	54946	-989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGATGTCCTGAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	76894593	76890016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532
ENSMUSG00000001435.16_76890753_76895186_1	chr10	-	646	6	ISM	ENSMUSG00000001435.16	ENSMUST00000105409.8	4791	41	54353	1903	54353	-1725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTGCTTCCAGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	76895186	76890752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091
ENSMUSG00000001436.16_76869102_76885444_1	chr10	+	1470	6	FSM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	56	821	0	-821	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTACTGCCAGCGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	76869101	76885444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_76869182_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
ENSMUSG00000001436.16_76874328_76885608_1	chr10	+	1410	5	ISM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	5282	657	5226	-657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAGACTTAAGAGTCGAA	NA	NA	NA	NA	NA	NA	NA	NA	76874327	76885608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
ENSMUSG00000001436.16_76877801_76885903_1	chr10	+	1468	4	ISM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	8755	362	8699	-362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTAGCCTGCTACCG	NA	NA	NA	NA	NA	NA	NA	NA	76877800	76885903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_76878404_76878615_76878809_76880594_76880737_76885373
ENSMUSG00000001440.6_97051641_97054234_1	chr11	-	1923	2	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	24473	1101	24473	-1101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGAGAAATGCTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	97054234	97051640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97053508_97054178
ENSMUSG00000001440.6_97051715_97054274_1	chr11	-	1889	2	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	24433	1175	24433	-1175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGCCTTTTGGTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	97054274	97051714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97053508_97054178
ENSMUSG00000001440.6_97052044_97055820_1	chr11	-	1889	5	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	22887	1504	22887	-1504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAGTCTTTCAGCAATA	NA	NA	NA	NA	NA	NA	NA	NA	97055820	97052043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778
ENSMUSG00000001440.6_97052395_97058468_1	chr11	-	1924	8	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	20239	1855	20239	-1855	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGAACGATCTGATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	97058468	97052394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375
ENSMUSG00000001440.6_97052467_97058514_1	chr11	-	1898	8	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	20193	1927	20193	-1927	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATAAAAGTAAATACACTC	NA	NA	NA	NA	NA	NA	NA	NA	97058514	97052466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375
ENSMUSG00000001440.6_97052851_97062363_1	chr11	-	1887	12	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	16344	2311	16344	-2311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGTTTTTTTTTTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	97062363	97052850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347
ENSMUSG00000001440.6_97052892_97062431_1	chr11	-	1914	12	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	16276	2352	16276	-2352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTAACTGAAGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	97062431	97052891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347
ENSMUSG00000001440.6_97052954_97062472_1	chr11	-	1893	12	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	16235	2414	16235	-2414	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTTCAAGTCATTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	97062472	97052953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347
ENSMUSG00000001440.6_97053087_97063941_1	chr11	-	1890	13	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	14766	2547	14766	-2547	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGCCCGGGTCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	97063941	97053086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878
ENSMUSG00000001440.6_97053191_97064055_1	chr11	-	1900	13	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	14652	2651	14652	-2651	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCCGGTGCCGAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	97064055	97053190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878
ENSMUSG00000001440.6_97053336_97068145_1	chr11	-	1979	15	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	10562	2796	10562	-2796	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTAGACATGAGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	97068145	97053335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071
ENSMUSG00000001440.6_97054179_97069185_1	chr11	-	1934	15	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	9522	3639	9522	-3639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTCTTGTCTGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	97069185	97054178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095
ENSMUSG00000001440.6_97054781_97071369_1	chr11	-	1891	16	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	7338	4241	7338	-4241	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGGACGGAGTGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	97071369	97054780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269
ENSMUSG00000001440.6_97055596_97072515_1	chr11	-	1890	16	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	6192	5056	6192	-5056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGAATCGTCCAGGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	97072515	97055595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450
ENSMUSG00000001440.6_97056205_97075798_1	chr11	-	1864	15	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	2909	5665	2909	-5665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTAAGCAGTCTGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	97075798	97056204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752
ENSMUSG00000001440.6_97056232_97075895_1	chr11	-	1934	15	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	2812	5692	2812	-5692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGCAGCTGCTCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	97075895	97056231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752
ENSMUSG00000001440.6_97058441_97078454_1	chr11	-	1890	15	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	253	7901	253	-7901	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACAGCTGGGTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	97078454	97058440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ENSMUSG00000001440.6_97060012_97078707_1	chr11	-	1953	13	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	0	9472	0	-9472	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTATGGAACGGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	97078707	97060011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ENSMUSG00000001441.14_97125881_97132873_1	chr11	-	577	6	ISM	ENSMUSG00000001441.14	ENST00000569955.2	1165	11	25637	0	25629	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCTTTACGTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	97132873	97125880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776
ENSMUSG00000001441.14_97126938_97133480_1	chr11	-	566	6	ISM	ENSMUSG00000001441.14	ENST00000569955.2	1165	11	25030	1057	25022	-1057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGCATCTGTAATCCGA	NA	NA	NA	NA	NA	NA	NA	NA	97133480	97126937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133383
ENSMUSG00000001441.14_97126981_97133609_1	chr11	-	652	6	ISM	ENSMUSG00000001441.14	ENST00000569955.2	1165	11	24901	1100	24893	-1100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCTGAGGTTGATGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	97133609	97126980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133383
ENSMUSG00000001441.14_97128985_97133609_1	chr11	-	572	5	ISM	ENSMUSG00000001441.14	ENST00000569955.2	1165	11	24901	3104	24893	-3104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTCTGCAGATTATACC	NA	NA	NA	NA	NA	NA	NA	NA	97133609	97128984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133383
ENSMUSG00000001441.14_97129050_97135297_1	chr11	-	571	6	ISM	ENSMUSG00000001441.14	ENST00000569955.2	1165	11	23213	3169	23205	-3169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCCTGGATTGAGTATC	NA	NA	NA	NA	NA	NA	NA	NA	97135297	97129049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133383_97133630_97135253
ENSMUSG00000001441.14_97131824_97135361_1	chr11	-	531	5	ISM	ENSMUSG00000001441.14	ENST00000569955.2	1165	11	23149	5943	23141	-5943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTGGGTTGCTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	97135361	97131823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97131870_97132629_97132664_97132776_97132874_97133383_97133630_97135253
ENSMUSG00000001441.14_97132787_97149179_1	chr11	-	587	5	ISM	ENSMUSG00000001441.14	ENST00000569955.2	1165	11	9331	6906	9323	-6906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCAGCTGGTAAAGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	97149179	97132786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97132874_97133383_97133630_97135253_97135362_97139083_97139150_97149099
ENSMUSG00000001441.14_97133460_97158449_1	chr11	-	451	5	ISM	ENSMUSG00000001441.14	ENST00000569955.2	1165	11	61	7579	53	-7579	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCAGAGCAAGGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	97158449	97133459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97133630_97135253_97135362_97139083_97139150_97149099_97149178_97158420
ENSMUSG00000001441.14_97133563_97149177_1	chr11	-	375	4	ISM	ENSMUSG00000001441.14	ENST00000620148.2	1482	12	22107	7690	9325	-7682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTATGTCTACGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	97149177	97133562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97133630_97135253_97135362_97139027_97139150_97149099
ENSMUSG00000001445.11_96932386_96939680_1	chr11	+	1349	5	FSM	ENSMUSG00000001445.11	ENSMUST00000001485.10	1708	5	0	359	0	336	multi-exon	FALSE	canonical	NA	NA	NA	NA	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCAAATTCTCAAAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	96932385	96939680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_96932479_96935353_96935524_96937855_96938021_96938238_96938384_96938904
ENSMUSG00000001445.11_96937854_96940039_1	chr11	+	1447	3	ISM	ENSMUSG00000001445.11	ENSMUST00000001485.10	1708	5	5468	0	5433	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTATGTTTATATCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	96937853	96940039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96938021_96938238_96938384_96938904
ENSMUSG00000001467.6_4131145_4136631_1	chr5	-	2331	2	ISM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	18115	0	18115	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGATTTTCTTTGCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	4136631	4131144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_4133304_4136459
ENSMUSG00000001467.6_4131393_4141887_1	chr5	-	2219	4	ISM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	12859	248	12859	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAGACTTTTAGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	4141887	4131392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844
ENSMUSG00000001467.6_4131428_4141954_1	chr5	-	2251	4	ISM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	12792	283	12792	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTCAAAAGTGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	4141954	4131427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844
ENSMUSG00000001467.6_4131498_4141997_1	chr5	-	2224	4	ISM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	12749	353	12749	-353	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCACTCTTGTTATCA	NA	NA	NA	NA	NA	NA	NA	NA	4141997	4131497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844
ENSMUSG00000001467.6_4131626_4142468_1	chr5	-	2220	5	ISM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	12278	481	12278	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTTTGTATTCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	4142468	4131625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387
ENSMUSG00000001467.6_4131971_4151220_1	chr5	-	2259	8	ISM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	3526	826	3526	-826	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGGTGGTTCCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	4151220	4131970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177
ENSMUSG00000001467.6_4132158_4153026_1	chr5	-	2305	9	ISM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	1720	1013	1720	-1013	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGACTAACACACTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	4153026	4132157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927
ENSMUSG00000001467.6_4132382_4154343_1	chr5	-	2291	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	403	1237	403	-1237	multi-exon	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCTTGAGACTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	4154343	4132381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ENSMUSG00000001467.6_4132669_4154556_1	chr5	-	2217	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	190	1524	190	-1524	multi-exon	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTAGATGGTGTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	4154556	4132668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ENSMUSG00000001467.6_4132727_4154637_1	chr5	-	2240	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	109	1582	109	-1582	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATATGAAAGGATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	4154637	4132726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ENSMUSG00000001472.18_124100595_124128645_1	chr8	+	2714	18	NNC	ENSMUSG00000001472.18	novel	5002	17	NA	NA	0	14	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCCTAAGCAGGTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	124100594	124128645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127820
ENSMUSG00000001472.18_124100595_124128645_2	chr8	+	2714	18	NNC	ENSMUSG00000001472.18	novel	2738	18	NA	NA	0	14	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCCTAAGCAGGTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	124100594	124128645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127369_124127437_124127814
ENSMUSG00000001472.18_124100595_124128645_3	chr8	+	2713	18	NNC	ENSMUSG00000001472.18	novel	2738	18	NA	NA	0	14	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCCTAAGCAGGTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	124100594	124128645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119877_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
ENSMUSG00000001472.18_124116461_124129970_1	chr8	+	1203	12	ISM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	15899	575	-8091	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCCATGCTCTAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	124116460	124129970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
ENSMUSG00000001472.18_124117601_124130142_1	chr8	+	1218	11	ISM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	17039	403	-6951	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGGATCATCATCGGG	NA	NA	NA	NA	NA	NA	NA	NA	124117600	124130142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
ENSMUSG00000001472.18_124119730_124130305_1	chr8	+	1201	9	ISM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	19168	240	-4822	163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTGCACCACCACACCT	NA	NA	NA	NA	NA	NA	NA	NA	124119729	124130305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
ENSMUSG00000001472.18_124122379_124130545_1	chr8	+	1222	7	ISM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	21817	0	-2173	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAACATGGTGATAT	NA	NA	NA	NA	NA	NA	NA	NA	124122378	124130545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
ENSMUSG00000001473.8_67523787_67526126_1	chr18	+	318	3	ISM	ENSMUSG00000001473.8	ENST00000592683.5	437	4	-9	8311	0	-8311	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTTCCACCTGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	67523786	67526126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_67523885_67524394_67524504_67526015
ENSMUSG00000001473.8_67523787_67535277_1	chr18	+	1128	5	NNC	ENSMUSG00000001473.8	novel	1270	5	NA	NA	0	-160	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTCCTGCACTGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	67523786	67535277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_67523885_67524394_67524504_67526020_67526127_67534379_67534413_67534495
ENSMUSG00000001473.8_67523787_67535304_1	chr18	+	1160	5	FSM	ENSMUSG00000001473.8	ENST00000591208.1	1270	5	-23	133	0	-133	multi-exon	FALSE	canonical	NA	NA	NA	NA	3533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCATGGACGAGATGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	67523786	67535304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_67523885_67524394_67524504_67526015_67526127_67534379_67534413_67534495
ENSMUSG00000001473.8_67523787_67535307_1	chr18	+	1157	4	NNC	ENSMUSG00000001473.8	novel	1758	4	NA	NA	0	-130	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGACGAGATGGAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	67523786	67535307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_67523885_67524394_67524504_67526015_67526127_67534468
ENSMUSG00000001473.8_67524391_67535439_1	chr18	+	1201	4	ISM	ENSMUSG00000001473.8	ENST00000591208.1	1270	5	581	-2	581	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAATAGGGAGCCATAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	67524390	67535439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_67524504_67526015_67526127_67534379_67534413_67534495
ENSMUSG00000001473.8_67524391_67535439_2	chr18	+	1196	4	NNC	ENSMUSG00000001473.8	novel	1270	5	NA	NA	581	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAATAGGGAGCCATAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	67524390	67535439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_67524504_67526020_67526127_67534379_67534413_67534495
ENSMUSG00000001473.8_67524391_67535439_3	chr18	+	1195	3	NNC	ENSMUSG00000001473.8	novel	1758	4	NA	NA	581	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAATAGGGAGCCATAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	67524390	67535439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_67524504_67526015_67526127_67534468
ENSMUSG00000001473.8_67526016_67535439_1	chr18	+	1078	2	NNC	ENSMUSG00000001473.8	novel	1758	4	NA	NA	2206	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAATAGGGAGCCATAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	67526015	67535439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_67526141_67534486
ENSMUSG00000001482.16_124174612_124183449_1	chr8	+	763	7	ISM	ENSMUSG00000001482.16	ENST00000563795.1	1656	11	90	5201	90	-3805	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGCCAGTGCTCCGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	124174611	124183449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409
ENSMUSG00000001482.16_124179483_124186396_1	chr8	+	871	7	ISM	ENSMUSG00000001482.16	ENST00000563795.1	1656	11	4961	2254	4961	-858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTCTCCCTCGCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	124179482	124186396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186306
ENSMUSG00000001482.16_124179605_124186575_1	chr8	+	769	8	ISM	ENSMUSG00000001482.16	ENST00000563795.1	1656	11	5083	2075	5083	-679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTGTGAACTCTGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	124179604	124186575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186306_124186397_124186555
ENSMUSG00000001482.16_124181051_124188222_1	chr8	+	767	8	ISM	ENSMUSG00000001482.16	ENST00000563795.1	1656	11	6529	428	6529	-428	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCACGTGCCCCAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	124181050	124188222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186306_124186397_124186555_124186666_124188202
ENSMUSG00000001482.16_124182224_124188360_1	chr8	+	775	7	ISM	ENSMUSG00000001482.16	ENST00000563795.1	1656	11	7702	290	7702	-290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCCACCAGATGTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	124182223	124188360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186306_124186397_124186555_124186666_124188202
ENSMUSG00000001482.16_124182284_124188405_1	chr8	+	760	7	ISM	ENSMUSG00000001482.16	ENST00000563795.1	1656	11	7762	245	7762	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTATATCCTCCAGACC	NA	NA	NA	NA	NA	NA	NA	NA	124182283	124188405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186306_124186397_124186555_124186666_124188202
ENSMUSG00000001482.16_124183247_124188534_1	chr8	+	753	6	ISM	ENSMUSG00000001482.16	ENST00000563795.1	1656	11	8725	116	8725	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGGGGGGTCAAAATACTG	NA	NA	NA	NA	NA	NA	NA	NA	124183246	124188534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124183273_124183409_124183524_124185089_124185171_124186306_124186397_124186555_124186666_124188202
ENSMUSG00000001482.16_124183422_124188642_1	chr8	+	823	5	ISM	ENSMUSG00000001482.16	ENST00000563795.1	1656	11	8900	8	8900	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTCCAGGCCTTTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	124183421	124188642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124183524_124185089_124185171_124186306_124186397_124186555_124186666_124188202
ENSMUSG00000001497.19_56742310_56756600_1	chr12	+	1273	4	FSM	ENSMUSG00000001497.19	ENSMUST00000001538.10	4166	4	-114	3007	56	-1458	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACAACTGTGACATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	56742309	56756600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_56742650_56743358_56743986_56746796_56746940_56756437
ENSMUSG00000001497.19_56743393_56756938_1	chr12	+	1237	3	ISM	ENSMUSG00000001497.19	ENSMUST00000001538.10	4166	4	969	2669	969	-1120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGCCCGCACACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	56743392	56756938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_56743986_56746796_56746940_56756437
ENSMUSG00000001497.19_56743524_56757131_1	chr12	+	1299	3	ISM	ENSMUSG00000001497.19	ENSMUST00000001538.10	4166	4	1100	2476	1100	-927	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGGTATGCTCTAATC	NA	NA	NA	NA	NA	NA	NA	NA	56743523	56757131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_56743986_56746796_56746940_56756437
ENSMUSG00000001497.19_56743563_56757142_1	chr12	+	1271	3	ISM	ENSMUSG00000001497.19	ENSMUST00000001538.10	4166	4	1139	2465	1139	-916	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCTAATCAAATAAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	56743562	56757142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_56743986_56746796_56746940_56756437
ENSMUSG00000001497.19_56746800_56757508_1	chr12	+	1211	2	ISM	ENSMUSG00000001497.19	ENST00000402703.6	2784	4	4546	550	4376	-550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCGTGTGTATTCAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	56746799	56757508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_56746940_56756437
ENSMUSG00000001497.19_56746842_56757573_1	chr12	+	1234	2	ISM	ENSMUSG00000001497.19	ENST00000402703.6	2784	4	4588	485	4418	-485	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGACTCAAAACATAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	56746841	56757573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_56746940_56756437
ENSMUSG00000001497.19_56746892_56757636_1	chr12	+	1247	2	ISM	ENSMUSG00000001497.19	ENST00000402703.6	2784	4	4638	422	4468	-422	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCAAGCACAGGACAACAA	NA	NA	NA	NA	NA	NA	NA	NA	56746891	56757636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_56746940_56756437
ENSMUSG00000001506.11_94827050_94834606_1	chr11	+	1828	25	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	0	9262	0	-9262	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGGCCAGGCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	94827049	94834606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94827271_94828735_94828931_94829052_94829085_94829203_94829240_94829329_94829432_94830216_94830286_94830522_94830568_94830729_94830784_94830943_94830998_94831370_94831425_94831543_94831598_94831927_94831982_94832062_94832108_94832205_94832260_94832372_94832418_94832553_94832608_94832841_94832941_94833029_94833075_94833167_94833267_94833385_94833440_94833620_94833729_94833831_94833886_94834168_94834268_94834415_94834470_94834558
ENSMUSG00000001506.11_94836669_94841687_1	chr11	+	1808	18	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	9619	2181	9619	-2181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGTTTGGAGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	94836668	94841687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94836745_94837100_94837209_94837399_94837454_94837601_94837656_94837899_94838008_94838095_94838150_94838259_94838314_94838443_94838606_94838708_94838817_94839157_94839266_94839368_94839423_94839531_94839640_94840006_94840061_94840181_94840290_94840545_94840600_94840922_94841031_94841116_94841400_94841534
ENSMUSG00000001506.11_94838472_94842563_1	chr11	+	1818	13	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	11422	1305	11422	-1305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGGACTTTGGAAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	94838471	94842563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94838606_94838708_94838817_94839157_94839266_94839368_94839423_94839531_94839640_94840006_94840061_94840181_94840290_94840545_94840600_94840922_94841031_94841116_94841400_94841534_94841726_94841926_94842170_94842298
ENSMUSG00000001506.11_94840221_94843158_1	chr11	+	1808	7	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	13171	710	13171	-710	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCGGACATGCATGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	94840220	94843158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94840290_94840545_94840600_94840922_94841031_94841116_94841400_94841534_94841726_94841926_94842170_94842298
ENSMUSG00000001506.11_94840941_94843320_1	chr11	+	1829	5	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	13891	548	13891	-548	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGCTACATCTCTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	94840940	94843320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94841031_94841116_94841400_94841534_94841726_94841926_94842170_94842298
ENSMUSG00000001506.11_94841298_94843534_1	chr11	+	1772	4	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	14248	334	14248	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAAGGTGCTATTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	94841297	94843534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94841400_94841534_94841726_94841926_94842170_94842298
ENSMUSG00000001506.11_94841563_94843736_1	chr11	+	1844	3	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	14513	132	14513	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCACAAAACAGTTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	94841562	94843736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94841726_94841926_94842170_94842298
ENSMUSG00000001507.17_94935300_94967399_1	chr11	-	4720	26	FSM	ENSMUSG00000001507.17	ENSMUST00000001548.14	4861	26	141	0	141	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTCTGCTCCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	94967399	94935299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
ENSMUSG00000001508.16_94853780_94862175_1	chr11	-	833	6	ISM	ENSMUSG00000001508.16	ENSMUST00000100551.11	1465	10	2114	132	2114	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCACTCAGAGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	94862175	94853779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94853907_94854027_94854226_94859884_94859912_94860179_94860389_94861496_94861660_94862066
ENSMUSG00000001508.16_94854034_94862868_1	chr11	-	863	6	ISM	ENSMUSG00000001508.16	ENSMUST00000100551.11	1465	10	1421	386	1421	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGTATGTCTAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	94862868	94854033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94854226_94859884_94859912_94860179_94860389_94861496_94861660_94862066_94862266_94862795
ENSMUSG00000001508.16_94860211_94863339_1	chr11	-	790	6	ISM	ENSMUSG00000001508.16	ENSMUST00000100551.11	1465	10	950	6563	950	-6177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATCATGTGCTTTCGG	NA	NA	NA	NA	NA	NA	NA	NA	94863339	94860210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94860389_94861496_94861660_94862066_94862266_94862795_94862869_94863039_94863195_94863317
ENSMUSG00000001508.16_94860256_94863412_1	chr11	-	818	6	ISM	ENSMUSG00000001508.16	ENSMUST00000100551.11	1465	10	877	6608	877	-6222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGCCTTTGTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	94863412	94860255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94860389_94861496_94861660_94862066_94862266_94862795_94862869_94863039_94863195_94863317
ENSMUSG00000001508.16_94861576_94867021_1	chr11	-	789	7	ISM	ENSMUSG00000001508.16	ENSMUST00000166320.8	1428	10	132	7542	132	-7542	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGGACAGCCTCCACTAC	NA	NA	NA	NA	NA	NA	NA	NA	94867021	94861575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94861660_94862066_94862266_94862795_94862869_94863039_94863195_94863317_94863438_94864227_94864305_94866940
ENSMUSG00000001510.9_95011052_95015455_1	chr11	+	1833	3	FSM	ENSMUSG00000001510.9	ENSMUST00000092768.7	2607	3	107	667	107	-667	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGGGGGACGGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	95011051	95015455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_95011473_95012533_95012725_95014234
ENSMUSG00000001510.9_95012533_95015887_1	chr11	+	1845	2	ISM	ENSMUSG00000001510.9	ENSMUST00000092768.7	2607	3	1588	235	1588	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTGTGTTGCAAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	95012532	95015887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_95012725_95014234
ENSMUSG00000001510.9_95012665_95016012_1	chr11	+	1838	2	ISM	ENSMUSG00000001510.9	ENSMUST00000092768.7	2607	3	1720	110	1720	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCAGCTCCCACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	95012664	95016012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_95012725_95014234
ENSMUSG00000001517.15_128339930_128344370_1	chr6	+	870	3	ISM	ENSMUSG00000001517.15	ENST00000627656.2	3299	7	5	7368	0	-6559	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTCACCTGGAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	128339929	128344370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_128340136_128342620_128343164_128344249
ENSMUSG00000001517.15_128340067_128346311_1	chr6	+	819	4	ISM	ENSMUSG00000001517.15	ENST00000627656.2	3299	7	142	5427	137	-4618	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTACTCTTATATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	128340066	128346311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_128340136_128342620_128343164_128344249_128344402_128346256
ENSMUSG00000001517.15_128342668_128347957_1	chr6	+	878	4	ISM	ENSMUSG00000001517.15	ENSMUST00000112148.4	2229	6	0	2972	0	-2972	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCGAGAGACATCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	128342667	128347957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_128343164_128344249_128344402_128346256_128346449_128347919
ENSMUSG00000001517.15_128342988_128349834_1	chr6	+	814	6	FSM	ENSMUSG00000001517.15	ENSMUST00000112148.4	2229	6	320	1095	320	-1095	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTCCCTTGCCTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	128342987	128349834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349496_128349567_128349739
ENSMUSG00000001517.15_128343130_128349943_1	chr6	+	781	6	FSM	ENSMUSG00000001517.15	ENSMUST00000112148.4	2229	6	462	986	462	-986	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTTCCTGCCACAGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	128343129	128349943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349496_128349567_128349739
ENSMUSG00000001517.15_128344250_128350024_1	chr6	+	831	5	ISM	ENSMUSG00000001517.15	ENST00000627656.2	3299	7	4325	1714	1582	-905	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATTAAGGAAGAAGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	128344249	128350024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_128344402_128346256_128346449_128347919_128348049_128349493_128349567_128349739
ENSMUSG00000001517.15_128344328_128350145_1	chr6	+	874	5	ISM	ENSMUSG00000001517.15	ENST00000627656.2	3299	7	4403	1593	1660	-784	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAACTCCTGGGAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	128344327	128350145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_128344402_128346256_128346449_128347919_128348049_128349493_128349567_128349739
ENSMUSG00000001517.15_128346403_128350321_1	chr6	+	830	4	ISM	ENSMUSG00000001517.15	ENST00000627656.2	3299	7	6478	1417	3735	-608	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGACCTGTTCTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	128346402	128350321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_128346449_128347919_128348049_128349493_128349567_128349739
ENSMUSG00000001524.15_35978722_35981612_1	chr17	-	893	9	ISM	ENSMUSG00000001524.15	ENSMUST00000160734.8	1569	14	2898	89	2898	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGCCAGGTCCAGCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	35981612	35978721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548
ENSMUSG00000001524.15_35978722_35982217_1	chr17	-	1115	11	ISM	ENSMUSG00000001524.15	ENSMUST00000160734.8	1569	14	2293	89	2293	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGCCAGGTCCAGCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	35982217	35978721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117
ENSMUSG00000001524.15_35980243_35982952_1	chr17	-	873	9	ISM	ENSMUSG00000001524.15	ENSMUST00000160734.8	1569	14	1558	1610	1558	-1610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGCAGCAGGCCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	35982952	35980242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884
ENSMUSG00000001524.15_35980573_35983665_1	chr17	-	857	9	ISM	ENSMUSG00000001524.15	ENSMUST00000160734.8	1569	14	845	1940	845	-1940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCAGGCTTCATTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	35983665	35980572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577
ENSMUSG00000001524.15_35980840_35984510_1	chr17	-	894	9	ISM	ENSMUSG00000001524.15	ENSMUST00000001565.15	1679	14	121	2218	0	-2207	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTACACCCAGCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	35984510	35980839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984447
ENSMUSG00000001524.15_35981081_35984631_1	chr17	-	932	8	ISM	ENSMUSG00000001524.15	ENSMUST00000001565.15	1679	14	0	2459	0	-2448	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTAGGGGGCTGGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	35984631	35981080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984447
ENSMUSG00000001525.11_36145841_36147130_1	chr17	-	1167	2	ISM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	2068	1028	2068	-1028	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCTCAGCTTTCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	36147130	36145840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36146932_36147054
ENSMUSG00000001525.11_36146002_36147628_1	chr17	-	1150	3	ISM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	1570	1189	1570	-1189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACGAGATGGAGTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	36147628	36146001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36146932_36147054_36147166_36147519
ENSMUSG00000001525.11_36146002_36149100_1	chr17	-	1362	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	98	1189	98	-1189	multi-exon	FALSE	canonical	NA	NA	NA	NA	8017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACGAGATGGAGTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	36149100	36146001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
ENSMUSG00000001525.11_36146129_36149100_1	chr17	-	1235	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	98	1316	98	-1316	multi-exon	FALSE	canonical	NA	NA	NA	NA	5493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGATGGCAGTCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	36149100	36146128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
ENSMUSG00000001525.11_36146186_36149147_1	chr17	-	1225	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	51	1373	51	-1373	multi-exon	FALSE	canonical	NA	NA	NA	NA	4080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAATGGATCCCCAACAA	NA	NA	NA	NA	NA	NA	NA	NA	36149147	36146185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
ENSMUSG00000001552.15_100262039_100263196_1	chr11	-	312	2	ISM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	25379	594	25379	-594	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCAGCCTGTGTCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	100263196	100262038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100262276_100263121
ENSMUSG00000001552.15_100262224_100264963_1	chr11	-	318	4	ISM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	23612	779	23612	-779	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTACCTGAGCCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	100264963	100262223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903
ENSMUSG00000001552.15_100263183_100265221_1	chr11	-	337	4	ISM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	23354	61	23354	-61	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCTGAGGCCTCCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	100265221	100263182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100263288_100263481_100263522_100264903_100265026_100265151
ENSMUSG00000001552.15_100264903_100267595_1	chr11	-	321	3	ISM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	20980	1781	20980	-1781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATCAGACCACATCTG	NA	NA	NA	NA	NA	NA	NA	NA	100267595	100264902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100265026_100265151_100265303_100267548
ENSMUSG00000001552.15_100264970_100267632_1	chr11	-	291	3	ISM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	20943	1848	20943	-1848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGCGAGTGTCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	100267632	100264969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100265026_100265151_100265303_100267548
ENSMUSG00000001552.15_100265202_100267754_1	chr11	-	307	2	ISM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	20821	2080	20821	-2080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCTGCCCCTCTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	100267754	100265201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100265303_100267548
ENSMUSG00000001552.15_100267604_100269014_1	chr11	-	321	2	ISM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	19561	4482	19561	-4482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCATGAACCGCATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	100269014	100267603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100267825_100268914
ENSMUSG00000001552.15_100267661_100269078_1	chr11	-	328	2	ISM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	19497	4539	19497	-4539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATGGAGGAGATCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	100269078	100267660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100267825_100268914
ENSMUSG00000001552.15_100269092_100271422_1	chr11	-	319	3	ISM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	17153	5970	17153	-5970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCCTGAGAGCCGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	100271422	100269091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100269254_100270347_100270452_100271369
ENSMUSG00000001552.15_100269145_100271480_1	chr11	-	324	3	ISM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	17095	6023	17095	-6023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAAACAAGACGCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	100271480	100269144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100269254_100270347_100270452_100271369
ENSMUSG00000001552.15_100271458_100273918_1	chr11	-	345	3	ISM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	14657	8336	14657	-8336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACGAGAAGCTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	100273918	100271457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100271515_100272501_100272704_100273832
ENSMUSG00000001552.15_100273916_100274374_1	chr11	-	310	2	ISM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	14201	10794	14201	-10794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCACAACCTCTCTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	100274374	100273915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100274072_100274220
ENSMUSG00000001552.15_100273964_100274445_1	chr11	-	333	2	ISM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	14130	10842	14130	-10842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGAACACCAGTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	100274445	100273963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100274072_100274220
ENSMUSG00000001555.11_100306671_100312038_1	chr11	+	536	4	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	148	3612	79	-2900	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACACCTACATCGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	100306670	100312038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100306852_100311225_100311372_100311716_100311907_100312019
ENSMUSG00000001555.11_100306671_100312081_1	chr11	+	579	4	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	148	3569	79	-2857	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGGGCTGCTGGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	100306670	100312081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100306852_100311225_100311372_100311716_100311907_100312019
ENSMUSG00000001555.11_100306795_100312144_1	chr11	+	518	4	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	272	3506	203	-2794	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGGGGAGAAAGGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	100306794	100312144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100306852_100311225_100311372_100311716_100311907_100312019
ENSMUSG00000001555.11_100311250_100312522_1	chr11	+	511	4	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	4727	3128	4658	-2416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCACAACCCGAAGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	100311249	100312522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100311372_100311716_100311907_100312019_100312166_100312469
ENSMUSG00000001555.11_100311761_100312787_1	chr11	+	500	4	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	5238	2863	5169	-2151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAATACCTATGTCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	100311760	100312787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100311907_100312019_100312166_100312469_100312660_100312769
ENSMUSG00000001555.11_100311871_100312915_1	chr11	+	518	4	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	5348	2735	5279	-2023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGTTTGGTCCCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	100311870	100312915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100311907_100312019_100312166_100312469_100312660_100312769
ENSMUSG00000001555.11_100312090_100313527_1	chr11	+	488	4	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	5567	2123	5498	-1411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATCAAGACGCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	100312089	100313527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100312166_100312469_100312660_100312769_100312916_100313451
ENSMUSG00000001555.11_100312558_100313985_1	chr11	+	516	4	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	6035	1665	5966	-953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCATGTGTGTAGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	100312557	100313985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100312660_100312769_100312916_100313451_100313645_100313910
ENSMUSG00000001555.11_100312769_100314288_1	chr11	+	510	4	ISM	ENSMUSG00000001555.11	ENSMUST00000107400.3	1467	8	6177	650	6177	-650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATTTGAGGTGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	100312768	100314288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100312916_100313451_100313645_100313910_100314054_100314261
ENSMUSG00000001555.11_100312826_100314332_1	chr11	+	497	4	ISM	ENSMUSG00000001555.11	ENSMUST00000107400.3	1467	8	6234	606	6234	-606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGCTACCTGTTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	100312825	100314332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100312916_100313451_100313645_100313910_100314054_100314261
ENSMUSG00000001555.11_100312884_100314379_1	chr11	+	486	4	ISM	ENSMUSG00000001555.11	ENSMUST00000107400.3	1467	8	6292	559	6292	-559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGACATGGATCTCAATA	NA	NA	NA	NA	NA	NA	NA	NA	100312883	100314379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100312916_100313451_100313645_100313910_100314054_100314261
ENSMUSG00000001555.11_100313520_100314779_1	chr11	+	498	4	ISM	ENSMUSG00000001555.11	ENSMUST00000107400.3	1467	8	6928	159	6928	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAAACCATCAGTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	100313519	100314779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100313645_100313910_100314054_100314261_100314426_100314713
ENSMUSG00000001555.11_100313571_100314830_1	chr11	+	498	4	ISM	ENSMUSG00000001555.11	ENSMUST00000107400.3	1467	8	6979	108	6979	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCACAGCTGAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	100313570	100314830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100313645_100313910_100314054_100314261_100314426_100314713
ENSMUSG00000001555.11_100313607_100314938_1	chr11	+	570	4	ISM	ENSMUSG00000001555.11	ENSMUST00000107400.3	1467	8	7015	0	7015	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGCTGGGGGGCAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	100313606	100314938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100313645_100313910_100314054_100314261_100314426_100314713
ENSMUSG00000001555.11_100314260_100315126_1	chr11	+	579	2	ISM	ENSMUSG00000001555.11	ENSMUST00000107400.3	1467	8	7668	-188	7668	188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTTGTGACAGATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	100314259	100315126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100314426_100314713
ENSMUSG00000001576.16_26780463_26874847_1	chr17	+	1696	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	0	1058	0	521	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTCAGCTGCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	26780462	26874847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
ENSMUSG00000001576.16_26780519_26874902_1	chr17	+	1695	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	56	1003	56	576	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCATTGCAAAGCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	26780518	26874902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
ENSMUSG00000001576.16_26780519_26874954_1	chr17	+	1747	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	56	951	56	628	multi-exon	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATAGGGCCATGTGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	26780518	26874954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
ENSMUSG00000001576.16_26813850_26874148_1	chr17	+	954	10	FSM	ENSMUSG00000001576.16	ENSMUST00000235915.2	1132	10	0	178	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCTGTCCAGCCCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	26813849	26874148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26813951_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
ENSMUSG00000001576.16_26827565_26850877_1	chr17	+	566	5	ISM	ENSMUSG00000001576.16	ENST00000523291.5	586	6	46981	-1	7266	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCGCCTTCTGTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	26827564	26850877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26850668
ENSMUSG00000001576.16_26848529_26875257_1	chr17	+	1732	6	ISM	ENSMUSG00000001576.16	ENSMUST00000163213.8	1009	8	8106	-1109	8106	-648	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTAGATCTCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	26848528	26875257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
ENSMUSG00000001576.16_26854997_26875373_1	chr17	+	1581	4	ISM	ENSMUSG00000001576.16	ENSMUST00000163213.8	1009	8	14574	-1225	14574	-532	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGGGCTTCATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	26854996	26875373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26855021_26857716_26857818_26860555_26860679_26874040
ENSMUSG00000001576.16_26854997_26875457_1	chr17	+	1665	4	ISM	ENSMUSG00000001576.16	ENSMUST00000163213.8	1009	8	14574	-1309	14574	-448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTGGTTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	26854996	26875457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26855021_26857716_26857818_26860555_26860679_26874040
ENSMUSG00000001576.16_26854997_26875553_1	chr17	+	1761	4	ISM	ENSMUSG00000001576.16	ENSMUST00000163213.8	1009	8	14574	-1405	14574	-352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTCCCTTTTTATATG	NA	NA	NA	NA	NA	NA	NA	NA	26854996	26875553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26855021_26857716_26857818_26860555_26860679_26874040
ENSMUSG00000001576.16_26860656_26875701_1	chr17	+	1684	2	ISM	ENSMUSG00000001576.16	ENSMUST00000163213.8	1009	8	20233	-1553	20233	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGGCAGGGTGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	26860655	26875701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26860679_26874040
ENSMUSG00000001604.15_135975263_136002214_1	chr4	+	1249	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGCCCTGGATGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	135975262	136002214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992245_135995331_135995475_135998543_135998691_136000954_136001027_136002090
ENSMUSG00000001604.15_135975263_136002214_2	chr4	+	1250	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGCCCTGGATGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	135975262	136002214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992240_135995319_135995475_135998543_135998691_136000960_136001027_136002090
ENSMUSG00000001627.13_40251566_40273188_1	chr12	-	3373	12	NNC	ENSMUSG00000001627.13	novel	3378	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGGGAGGTTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	40273188	40251565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264130_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ENSMUSG00000001627.13_40251566_40273188_2	chr12	-	3372	12	NNC	ENSMUSG00000001627.13	novel	3378	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1888	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGGGAGGTTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	40273188	40251565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_40253451_40253917_40254014_40254295_40254425_40256993_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ENSMUSG00000001627.13_40253130_40298288_1	chr12	-	2177	13	NNC	ENSMUSG00000001627.13	novel	2181	13	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTGTAGTGAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	40298288	40253129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264130_40266188_40266314_40267156_40267242_40267376_40267482_40272867_40273067_40297798
ENSMUSG00000001627.13_40253130_40298288_2	chr12	-	2182	13	FSM	ENSMUSG00000001627.13	ENST00000675578.1	2181	13	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTGTAGTGAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	40298288	40253129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867_40273067_40297798
ENSMUSG00000001627.13_40253361_40298078_1	chr12	-	1811	13	FSM	ENSMUSG00000001627.13	ENST00000005558.8	1798	13	-15	2	-15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGAATTTGATGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	40298078	40253360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867_40273137_40297798
ENSMUSG00000001627.13_40262953_40297823_1	chr12	-	713	7	ISM	ENSMUSG00000001627.13	ENST00000621379.4	1757	12	240	9822	240	-9592	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGCTGGAGCTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	40297823	40262952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40297798
ENSMUSG00000001627.13_40263012_40297868_1	chr12	-	699	7	ISM	ENSMUSG00000001627.13	ENST00000621379.4	1757	12	195	9881	195	-9651	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGCTCGCTTCTCGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	40297868	40263011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40297798
ENSMUSG00000001627.13_40263062_40297922_1	chr12	-	703	7	ISM	ENSMUSG00000001627.13	ENST00000621379.4	1757	12	141	9931	141	-9701	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAAAGACACTAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	40297922	40263061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40297798
ENSMUSG00000001627.13_40263220_40298078_1	chr12	-	792	6	ISM	ENSMUSG00000001627.13	ENST00000621379.4	1757	12	-15	10089	-15	-9859	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATATCACTGTAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	40298078	40263219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40297798
ENSMUSG00000001630.14_146660007_146673693_1	chr6	+	1016	10	ISM	ENSMUSG00000001630.14	ENSMUST00000111644.2	2274	14	33473	4361	33473	-4361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGCCAAGGACTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	146660006	146673693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595
ENSMUSG00000001630.14_146669912_146677397_1	chr6	+	975	8	ISM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	43419	2913	43378	-657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGTATTAACTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	146669911	146677397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ENSMUSG00000001630.14_146673098_146677709_1	chr6	+	1030	5	ISM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	46605	2601	46564	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTACCGGCTCCAAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	146673097	146677709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ENSMUSG00000001630.14_146676919_146678054_1	chr6	+	1034	2	ISM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	50426	2256	50385	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGATCAGTCAATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	146676918	146678054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_146676990_146677091
ENSMUSG00000001632.17_113284689_113295682_1	chr6	+	3334	7	ISM	ENSMUSG00000001632.17	ENST00000684199.1	5153	14	28	5884	28	-5884	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTGATAAGTCATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	113284688	113295682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113285705_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372
ENSMUSG00000001632.17_113284819_113296141_1	chr6	+	3347	8	ISM	ENSMUSG00000001632.17	ENST00000684199.1	5153	14	158	5425	158	-5425	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGGAGATGACAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	113284818	113296141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113285705_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998
ENSMUSG00000001632.17_113284887_113296186_1	chr6	+	3324	8	ISM	ENSMUSG00000001632.17	ENST00000684199.1	5153	14	226	5380	226	-5380	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGGCCGGGATGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	113284886	113296186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113285705_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998
ENSMUSG00000001632.17_113284962_113296248_1	chr6	+	3311	8	ISM	ENSMUSG00000001632.17	ENST00000684199.1	5153	14	301	5318	301	-5318	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGCAGCCTGTGACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	113284961	113296248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113285705_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998
ENSMUSG00000001632.17_113285117_113296771_1	chr6	+	3373	9	ISM	ENSMUSG00000001632.17	ENST00000684199.1	5153	14	456	4795	456	-4795	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCCACGGAGGCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	113285116	113296771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113285705_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113296628
ENSMUSG00000001632.17_113285195_113296851_1	chr6	+	3375	9	ISM	ENSMUSG00000001632.17	ENST00000684199.1	5153	14	534	4715	534	-4715	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCGGCCCAGTTCAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	113285194	113296851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113285705_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113296628
ENSMUSG00000001632.17_113285352_113297440_1	chr6	+	3326	10	ISM	ENSMUSG00000001632.17	ENST00000684199.1	5153	14	691	4126	691	-4126	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTCTTGGTGTACCGTA	NA	NA	NA	NA	NA	NA	NA	NA	113285351	113297440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113285705_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113296628_113296914_113297394
ENSMUSG00000001632.17_113285391_113297506_1	chr6	+	3353	10	ISM	ENSMUSG00000001632.17	ENST00000684199.1	5153	14	730	4060	730	-4060	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGCAGCAGCAGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	113285390	113297506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113285705_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113296628_113296914_113297394
ENSMUSG00000001632.17_113285458_113297542_1	chr6	+	3322	10	ISM	ENSMUSG00000001632.17	ENST00000684199.1	5153	14	797	4024	797	-4024	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCATTCCTACAGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	113285457	113297542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113285705_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113296628_113296914_113297394
ENSMUSG00000001632.17_113285627_113299047_1	chr6	+	3409	12	ISM	ENSMUSG00000001632.17	ENST00000684199.1	5153	14	966	2519	966	-2519	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCCTATGGTTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	113285626	113299047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113285705_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928
ENSMUSG00000001632.17_113286762_113299529_1	chr6	+	3204	11	NIC	ENSMUSG00000001632.17	novel	4603	14	NA	NA	-2	-2037	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAAAGATGGATGCATT	NA	NA	NA	NA	NA	NA	NA	NA	113286761	113299529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113297394_113297543_113298689_113298827_113298928_113299048_113299373
ENSMUSG00000001632.17_113286892_113299528_1	chr6	+	3358	12	ISM	ENSMUSG00000001632.17	ENST00000684199.1	5153	14	2231	2038	128	-2038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGAAAGATGGATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	113286891	113299528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373
ENSMUSG00000001632.17_113286994_113301040_1	chr6	+	3353	13	ISM	ENSMUSG00000001632.17	ENST00000684199.1	5153	14	2333	526	230	-526	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGCAGATTGCTTACCA	NA	NA	NA	NA	NA	NA	NA	NA	113286993	113301040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ENSMUSG00000001632.17_113287057_113301108_1	chr6	+	3358	13	ISM	ENSMUSG00000001632.17	ENST00000684199.1	5153	14	2396	458	293	-458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCGATAGTGACTGAT	NA	NA	NA	NA	NA	NA	NA	NA	113287056	113301108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ENSMUSG00000001632.17_113287240_113301380_1	chr6	+	3162	12	NIC	ENSMUSG00000001632.17	novel	4603	14	NA	NA	476	-186	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTGGTGGGCCACAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	113287239	113301380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ENSMUSG00000001632.17_113287300_113301454_1	chr6	+	3176	12	NIC	ENSMUSG00000001632.17	novel	4603	14	NA	NA	536	-112	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACCTGCCTAGAGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	113287299	113301454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ENSMUSG00000001632.17_113287300_113301584_1	chr6	+	3306	12	NIC	ENSMUSG00000001632.17	novel	4603	14	NA	NA	536	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTGTAATTATTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	113287299	113301584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ENSMUSG00000001632.17_113291813_113301806_1	chr6	+	3188	11	NNC	ENSMUSG00000001632.17	novel	4061	12	NA	NA	5049	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATTTAGAATTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	113291812	113301806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_113292512_113293494_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ENSMUSG00000001632.17_113291834_113301802_1	chr6	+	3171	11	NNC	ENSMUSG00000001632.17	novel	4603	14	NA	NA	5070	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	620	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTCTATTTAGAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	113291833	113301802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113297394_113297543_113298689_113298827_113298928_113299048_113299374_113299529_113300943
ENSMUSG00000001632.17_113291838_113301802_1	chr6	+	3168	11	NIC	ENSMUSG00000001632.17	novel	4603	14	NA	NA	5074	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTCTATTTAGAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	113291837	113301802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ENSMUSG00000001642.19_34280869_34287937_1	chr6	-	963	7	ISM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	6476	0	6476	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGTGGTCCGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34287937	34280868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859
ENSMUSG00000001642.19_34281015_34288973_1	chr6	-	934	8	ISM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	5440	146	5440	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTTAACACAAGTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	34288973	34281014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856
ENSMUSG00000001642.19_34281182_34289707_1	chr6	-	900	9	ISM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	4706	313	4706	-313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCCTCATCTGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	34289707	34281181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574
ENSMUSG00000001642.19_34281257_34294365_1	chr6	-	951	10	FSM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	48	388	48	-388	multi-exon	FALSE	canonical	NA	NA	NA	NA	3367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCCTTCCACGCCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	34294365	34281256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34294274
ENSMUSG00000001642.19_34283475_34294365_1	chr6	-	933	9	ISM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	48	2606	48	-2606	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTCCACTGTGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	34294365	34283474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34294274
ENSMUSG00000001655.7_102829709_102836476_1	chr15	+	1517	2	FSM	ENSMUSG00000001655.7	ENSMUST00000001700.7	2461	2	171	773	171	-773	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTCTTCCCCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	102829708	102836476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102830353_102835603
ENSMUSG00000001666.9_75607064_75608658_1	chr10	-	364	2	FSM	ENSMUSG00000001666.9	ENSMUST00000172820.2	574	2	210	0	210	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTTCTTTGCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	75608658	75607063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_75607341_75608571
ENSMUSG00000001666.9_75607285_75609248_1	chr10	-	431	3	FSM	ENSMUSG00000001666.9	ENSMUST00000001716.8	649	3	0	218	0	-218	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGACATTTCTGTGACGG	NA	NA	NA	NA	NA	NA	NA	NA	75609248	75607284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_75607341_75608571_75608748_75609049
ENSMUSG00000001674.12_121481564_121493658_1	chr1	-	1820	12	ISM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	2060	0	2060	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTATACCTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	121493658	121481563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609
ENSMUSG00000001674.12_121481700_121493708_1	chr1	-	1734	12	ISM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	2010	136	2010	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCCCAGCTTCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	121493708	121481699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609
ENSMUSG00000001674.12_121481760_121493757_1	chr1	-	1723	12	ISM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	1961	196	1961	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCCAGCAGACCGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	121493757	121481759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609
ENSMUSG00000001674.12_121482875_121493897_1	chr1	-	1825	11	ISM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	1821	1311	1821	-1311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACCTCAGCTGCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	121493897	121482874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609
ENSMUSG00000001674.12_121483000_121495542_1	chr1	-	1723	12	ISM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	176	1436	176	-1436	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCAGGTTGCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	121495542	121482999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ENSMUSG00000001674.12_121483057_121495591_1	chr1	-	1715	12	ISM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	127	1493	127	-1493	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAGCATATGACTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	121495591	121483056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ENSMUSG00000001674.12_121483085_121495718_1	chr1	-	1814	12	ISM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	0	1521	0	-1521	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGCCCAGGAAGCATACA	NA	NA	NA	NA	NA	NA	NA	NA	121495718	121483084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ENSMUSG00000001687.16_148441939_148446165_1	chr5	-	1224	3	ISM	ENSMUSG00000001687.16	ENSMUST00000201595.4	2064	6	43434	0	43307	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATATTTTTTTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	148446165	148441938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_148442998_148443255_148443334_148446078
ENSMUSG00000001687.16_148442110_148448812_1	chr5	-	1162	4	ISM	ENSMUSG00000001687.16	ENSMUST00000164904.2	2001	7	40787	158	40660	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTGCTTGCAATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	148448812	148442109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703
ENSMUSG00000001687.16_148442110_148488860_1	chr5	-	1260	5	FSM	ENSMUSG00000001687.16	ENSMUST00000079324.14	2537	5	612	665	612	-158	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTGCTTGCAATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	148488860	148442109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762
ENSMUSG00000001687.16_148442258_148488860_1	chr5	-	1112	5	FSM	ENSMUSG00000001687.16	ENSMUST00000079324.14	2537	5	612	813	612	-306	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGCCTGAGTGGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	148488860	148442257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762
ENSMUSG00000001687.16_148442788_148489472_1	chr5	-	1194	5	FSM	ENSMUSG00000001687.16	ENSMUST00000079324.14	2537	5	0	1343	0	-836	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCAGTGTGGTCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	148489472	148442787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762
ENSMUSG00000001700.11_56565365_56625031_1	chr18	+	1105	12	ISM	ENSMUSG00000001700.11	ENSMUST00000070166.6	2605	14	161	11833	161	-11605	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGACCCTGACGTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	56565364	56625031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_56565430_56602604_56602725_56607090_56607203_56609674_56609742_56611920_56612025_56615692_56615789_56618283_56618356_56618447_56618529_56621822_56621935_56622686_56622810_56623742_56623831_56624966
ENSMUSG00000001707.9_38828299_38839045_1	chr13	-	2062	2	ISM	ENSMUSG00000001707.9	ENSMUST00000001757.9	2553	4	3989	116	3989	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGCATCTTCATGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	38839045	38828298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_38830287_38838971
ENSMUSG00000001707.9_38828548_38842931_1	chr13	-	2085	4	FSM	ENSMUSG00000001707.9	ENSMUST00000001757.9	2553	4	103	365	103	-365	multi-exon	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTGACTGCTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	38842931	38828547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_38830287_38838971_38839068_38840015_38840217_38842882
ENSMUSG00000001729.15_112620530_112621597_1	chr12	-	719	2	ISM	ENSMUSG00000001729.15	ENSMUST00000128300.9	1342	12	16401	-577	16401	-275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGAGAGCCCCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	112621597	112620529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112621212_112621560
ENSMUSG00000001729.15_112620576_112621656_1	chr12	-	732	2	ISM	ENSMUSG00000001729.15	ENSMUST00000128300.9	1342	12	16342	-531	16342	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCCATGCTGTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	112621656	112620575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112621212_112621560
ENSMUSG00000001729.15_112620751_112623255_1	chr12	-	697	4	ISM	ENSMUSG00000001729.15	ENSMUST00000128300.9	1342	12	14743	-356	14743	356	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGGTCCAGGGCCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	112623255	112620750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210
ENSMUSG00000001729.15_112620884_112623407_1	chr12	-	716	4	ISM	ENSMUSG00000001729.15	ENSMUST00000128300.9	1342	12	14591	-223	14591	223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGCCCAGAACAATTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	112623407	112620883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210
ENSMUSG00000001729.15_112621107_112623827_1	chr12	-	766	6	ISM	ENSMUSG00000001729.15	ENSMUST00000001780.10	2690	14	16883	852	14171	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCTCCTCTGCATTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	112623827	112621106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701
ENSMUSG00000001729.15_112622976_112625045_1	chr12	-	719	7	ISM	ENSMUSG00000001729.15	ENSMUST00000001780.10	2690	14	15665	2721	12953	-1869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCAACATCGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	112625045	112622975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979
ENSMUSG00000001729.15_112623325_112625632_1	chr12	-	693	7	ISM	ENSMUSG00000001729.15	ENSMUST00000001780.10	2690	14	15078	3070	12366	-2218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGAGAAGCTGTTCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	112625632	112623324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562
ENSMUSG00000001729.15_112623528_112626095_1	chr12	-	756	7	ISM	ENSMUSG00000001729.15	ENSMUST00000001780.10	2690	14	14615	3273	11903	-2421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGCCGGAGTACCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	112626095	112623527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983
ENSMUSG00000001729.15_112623744_112628700_1	chr12	-	698	7	ISM	ENSMUSG00000001729.15	ENSMUST00000128300.9	1342	12	9298	2637	9298	-2637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGCACTCCGAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	112628700	112623743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613
ENSMUSG00000001729.15_112623803_112628742_1	chr12	-	681	7	ISM	ENSMUSG00000001729.15	ENSMUST00000128300.9	1342	12	9256	2696	9256	-2696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTCTCCGAGGACCGG	NA	NA	NA	NA	NA	NA	NA	NA	112628742	112623802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613
ENSMUSG00000001729.15_112624136_112638030_1	chr12	-	702	7	ISM	ENSMUSG00000001729.15	ENSMUST00000128300.9	1342	12	-32	3029	-32	-3029	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTGTCATGGAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	112638030	112624135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949
ENSMUSG00000001729.15_112625023_112640535_1	chr12	-	719	6	ISM	ENSMUSG00000001729.15	ENSMUST00000001780.10	2690	14	175	4768	175	-3916	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGCCATGAAGATCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	112640535	112625022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ENSMUSG00000001729.15_112625088_112640640_1	chr12	-	759	6	ISM	ENSMUSG00000001729.15	ENSMUST00000001780.10	2690	14	70	4833	70	-3981	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGGCAAGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	112640640	112625087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ENSMUSG00000001739.15_136996503_137001314_1	chr5	+	709	3	ISM	ENSMUSG00000001739.15	ENST00000401528.5	969	5	37	2266	37	-2266	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGACCCTCCACATACTT	NA	NA	NA	NA	NA	NA	NA	NA	136996502	137001314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136996591_136996697_136997178_137001173
ENSMUSG00000001739.15_136996548_137003308_1	chr5	+	702	4	ISM	ENSMUSG00000001739.15	ENST00000401528.5	969	5	82	272	82	-272	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTATCTCGTGGTACGC	NA	NA	NA	NA	NA	NA	NA	NA	136996547	137003308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136996591_136996697_136997178_137001173_137001339_137003294
ENSMUSG00000001739.15_136996837_137003580_1	chr5	+	705	4	ISM	ENSMUSG00000001739.15	ENST00000401528.5	969	5	371	0	114	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGGATGAGCGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	136996836	137003580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136997178_137001173_137001339_137003294_137003377_137003463
ENSMUSG00000001751.10_100961085_100967857_1	chr11	+	1672	6	FSM	ENSMUSG00000001751.10	ENSMUST00000001802.10	2560	6	247	641	247	-641	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTAGATGAGCTGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	100961084	100967857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_100961328_100961905_100962054_100962721_100962869_100963042_100963129_100964672_100964930_100967066
ENSMUSG00000001751.10_100961946_100968130_1	chr11	+	1662	5	ISM	ENSMUSG00000001751.10	ENSMUST00000001802.10	2560	6	1108	368	1108	-368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTGAGAAGAACGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	100961945	100968130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100962054_100962721_100962869_100963042_100963129_100964672_100964930_100967066
ENSMUSG00000001751.10_100962789_100968297_1	chr11	+	1654	4	ISM	ENSMUSG00000001751.10	ENSMUST00000001802.10	2560	6	1951	201	1951	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAGGTCCTCAAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	100962788	100968297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100962869_100963042_100963129_100964672_100964930_100967066
ENSMUSG00000001751.10_100963040_100968498_1	chr11	+	1778	3	ISM	ENSMUSG00000001751.10	ENSMUST00000001802.10	2560	6	2202	0	2202	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGGACGTTGCTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	100963039	100968498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100963129_100964672_100964930_100967066
ENSMUSG00000001751.10_100964731_100968498_1	chr11	+	1631	2	ISM	ENSMUSG00000001751.10	ENSMUST00000001802.10	2560	6	3893	0	3893	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGGACGTTGCTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	100964730	100968498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100964930_100967066
ENSMUSG00000001755.13_100973444_100974489_1	chr11	+	738	2	ISM	ENSMUSG00000001755.13	ENSMUST00000001806.10	2138	10	53	2956	-7	-2956	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGCTTGTGGTGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	100973443	100974489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100973517_100973824
ENSMUSG00000001755.13_100973879_100975226_1	chr11	+	739	2	ISM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	428	2219	428	-2219	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTGAACTCGTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	100973878	100975226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100974533_100975141
ENSMUSG00000001755.13_100973934_100975279_1	chr11	+	737	2	ISM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	483	2166	483	-2166	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTGGAGTTCCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	100973933	100975279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100974533_100975141
ENSMUSG00000001755.13_100974040_100975625_1	chr11	+	753	3	ISM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	589	1820	589	-1820	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAGTCACAATGAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	100974039	100975625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100974533_100975141_100975357_100975580
ENSMUSG00000001755.13_100974181_100975871_1	chr11	+	737	4	ISM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	730	1574	730	-1574	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACAGGCATCAGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	100974180	100975871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100974533_100975141_100975357_100975580_100975713_100975833
ENSMUSG00000001755.13_100974298_100976134_1	chr11	+	799	5	ISM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	847	1311	847	-1311	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGAAGGTCCTGGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	100974297	100976134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107
ENSMUSG00000001755.13_100974447_100976446_1	chr11	+	773	6	ISM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	996	999	996	-999	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGGAGGGATGACGG	NA	NA	NA	NA	NA	NA	NA	NA	100974446	100976446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361
ENSMUSG00000001755.13_100975206_100976849_1	chr11	+	747	7	ISM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	1755	596	1755	-596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTAAGTGAGGCAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	100975205	100976849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823
ENSMUSG00000001755.13_100975255_100976910_1	chr11	+	759	7	ISM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	1804	535	1804	-535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGCAGAGCAACGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	100975254	100976910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823
ENSMUSG00000001755.13_100975320_100976964_1	chr11	+	748	7	ISM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	1869	481	1869	-481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGGTTGGTGCAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	100975319	100976964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823
ENSMUSG00000001755.13_100975617_100977153_1	chr11	+	761	7	ISM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	2166	292	2166	-292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCAAACTGGCCCTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	100975616	100977153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
ENSMUSG00000001755.13_100975661_100977229_1	chr11	+	793	7	ISM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	2210	216	2210	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGGGGCTTTAAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	100975660	100977229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
ENSMUSG00000001755.13_100975905_100977296_1	chr11	+	737	6	ISM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	2454	149	2454	-149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTCCAGCAATGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	100975904	100977296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
ENSMUSG00000001755.13_100976105_100977445_1	chr11	+	770	5	ISM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	2654	0	2654	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	100976104	100977445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
ENSMUSG00000001761.8_29736033_29761141_1	chr6	+	3216	12	FSM	ENSMUSG00000001761.8	ENSMUST00000001812.5	3779	12	340	223	340	-223	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCTGTAGCTTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	29736032	29761141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
ENSMUSG00000001761.8_29736142_29761194_1	chr6	+	3160	12	FSM	ENSMUSG00000001761.8	ENSMUST00000001812.5	3779	12	449	170	449	-170	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAGCGGGGGGACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	29736141	29761194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
ENSMUSG00000001761.8_29736174_29761364_1	chr6	+	3298	12	FSM	ENSMUSG00000001761.8	ENSMUST00000001812.5	3779	12	481	0	481	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGTTTCTTTTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	29736173	29761364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
ENSMUSG00000001767.6_145759399_145767619_1	chr2	-	2046	7	ISM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	9315	0	9315	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCACAGTGATTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	145767619	145759398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427
ENSMUSG00000001767.6_145759524_145768785_1	chr2	-	2011	8	ISM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	8149	125	8149	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAGCTTTGTGAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	145768785	145759523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695
ENSMUSG00000001767.6_145759683_145770137_1	chr2	-	2030	9	ISM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	6797	284	6797	-284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTGGCTTCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	145770137	145759682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040
ENSMUSG00000001767.6_145759743_145770188_1	chr2	-	2021	9	ISM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	6746	344	6746	-344	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATCTGAACAGATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	145770188	145759742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040
ENSMUSG00000001767.6_145759864_145772517_1	chr2	-	1995	10	ISM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	4417	465	4417	-465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAGTATGCTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	145772517	145759863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453
ENSMUSG00000001767.6_145760012_145773311_1	chr2	-	2072	11	ISM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	3623	613	3623	-613	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAACTTTTAGATTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	145773311	145760011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189
ENSMUSG00000001767.6_145760156_145774198_1	chr2	-	1998	12	ISM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	2736	757	2736	-757	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGCATTTGCTCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	145774198	145760155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165
ENSMUSG00000001767.6_145760417_145776634_1	chr2	-	2110	14	FSM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	300	1018	300	-1018	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACAGGAAAGAGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	145776634	145760416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
ENSMUSG00000001767.6_145762513_145776934_1	chr2	-	2061	12	ISM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	0	3114	0	-3114	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTACTTTTTAAATAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	145776934	145762512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
ENSMUSG00000001768.17_145702475_145728138_1	chr2	+	1838	5	ISM	ENSMUSG00000001768.17	ENSMUST00000094480.11	4657	13	74439	1398	74439	-1398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGGCTTACACATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	145702474	145728138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
ENSMUSG00000001768.17_145702598_145728278_1	chr2	+	1855	5	ISM	ENSMUSG00000001768.17	ENSMUST00000094480.11	4657	13	74562	1258	74562	-1258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCTTGCCCTTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	145702597	145728278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
ENSMUSG00000001768.17_145702846_145728508_1	chr2	+	1837	5	ISM	ENSMUSG00000001768.17	ENSMUST00000094480.11	4657	13	74810	1028	74810	-1028	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGACGCCTCATAGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	145702845	145728508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
ENSMUSG00000001768.17_145718357_145728831_1	chr2	+	1865	4	ISM	ENSMUSG00000001768.17	ENSMUST00000094480.11	4657	13	90321	705	90321	-705	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCGCAAGACGTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	145718356	145728831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_145718617_145720763_145720896_145725241_145725406_145727522
ENSMUSG00000001768.17_145720799_145729100_1	chr2	+	1839	3	ISM	ENSMUSG00000001768.17	ENSMUST00000094480.11	4657	13	92763	436	92763	-436	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAAACAAACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	145720798	145729100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_145720896_145725241_145725406_145727522
ENSMUSG00000001773.15_86368937_86375126_1	chr7	-	238	3	ISM	ENSMUSG00000001773.15	ENST00000356696.7	2046	17	47389	70	47389	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGACAGATTTCTATTG	NA	NA	NA	NA	NA	NA	NA	NA	86375126	86368936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_86369057_86374616_86374699_86375090
ENSMUSG00000001773.15_86378282_86383367_1	chr7	-	251	3	ISM	ENSMUSG00000001773.15	ENST00000356696.7	2046	17	39148	9415	39148	-9415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTCTGAATTAGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	86383367	86378281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_86378373_86380933_86381026_86383299
ENSMUSG00000001773.15_86396037_86410997_1	chr7	-	238	3	ISM	ENSMUSG00000001773.15	ENST00000356696.7	2046	17	11518	27170	11518	-27170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTACAACGTGGGACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	86410997	86396036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_86396092_86406145_86406240_86410908
ENSMUSG00000001773.15_86412185_86420975_1	chr7	-	233	3	ISM	ENSMUSG00000001773.15	ENST00000356696.7	2046	17	1540	43318	1540	-43318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTTGTTCTGGGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	86420975	86412184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_86412251_86417343_86417446_86420910
ENSMUSG00000001773.15_86420952_86422488_1	chr7	-	229	2	ISM	ENSMUSG00000001773.15	ENST00000356696.7	2046	17	27	52085	27	-52085	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTAACTATATCTCAATA	NA	NA	NA	NA	NA	NA	NA	NA	86422488	86420951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_86421098_86422405
ENSMUSG00000001774.9_18203684_18224123_1	chr9	+	911	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	263	4615	82	-836	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACTATGAGAAAGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	18203683	18224123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ENSMUSG00000001774.9_18213414_18224382_1	chr9	+	898	8	ISM	ENSMUSG00000001774.9	ENST00000457199.6	1618	9	6819	577	6819	-577	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTCAAGTCTCCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	18213413	18224382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ENSMUSG00000001783.4_85774501_85783197_1	chr10	-	1396	7	ISM	ENSMUSG00000001783.4	ENSMUST00000001834.4	2009	12	10490	0	10490	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTCTCTTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	85783197	85774500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040
ENSMUSG00000001783.4_85774685_85787318_1	chr10	-	1469	9	ISM	ENSMUSG00000001783.4	ENSMUST00000001834.4	2009	12	6369	184	6369	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTTCTTCCTTTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	85787318	85774684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218
ENSMUSG00000001783.4_85774852_85793503_1	chr10	-	1474	12	FSM	ENSMUSG00000001783.4	ENSMUST00000001834.4	2009	12	184	351	184	-351	multi-exon	FALSE	canonical	NA	NA	NA	NA	1485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCCCATGGACTGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	85793503	85774851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
ENSMUSG00000001783.4_85774865_85791643_1	chr10	-	1413	11	NNC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	2044	-364	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGCGTCTGAGGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	85791643	85774864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779683_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789300_85789369_85791582
ENSMUSG00000001783.4_85774934_85793529_1	chr10	-	1418	12	FSM	ENSMUSG00000001783.4	ENSMUST00000001834.4	2009	12	158	433	158	-433	multi-exon	FALSE	canonical	NA	NA	NA	NA	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGGATCAGCAAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	85793529	85774933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
ENSMUSG00000001783.4_85777762_85793687_1	chr10	-	1527	11	ISM	ENSMUSG00000001783.4	ENSMUST00000001834.4	2009	12	0	3261	0	-3261	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGCGTCCTGAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	85793687	85777761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
ENSMUSG00000001785.14_85707770_85712389_1	chr10	+	479	5	ISM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	75	12571	75	-12571	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACCTCATCGTTTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	85707769	85712389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349
ENSMUSG00000001785.14_85710179_85714438_1	chr10	+	486	5	ISM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	2484	10522	2484	-10522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGCATCTACTGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	85710178	85714438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342
ENSMUSG00000001785.14_85710414_85715176_1	chr10	+	429	5	ISM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	2719	9784	2719	-9784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATATAGTGGACTCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	85710413	85715176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125
ENSMUSG00000001785.14_85710471_85715226_1	chr10	+	422	5	ISM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	2776	9734	2776	-9734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCAAAAAGAAGAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	85710470	85715226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125
ENSMUSG00000001785.14_85715193_85721517_1	chr10	+	441	6	ISM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	7498	3443	7498	-3443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAAGCCAATCTTTACAC	NA	NA	NA	NA	NA	NA	NA	NA	85715192	85721517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473
ENSMUSG00000001785.14_85715722_85721722_1	chr10	+	458	6	ISM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	8027	3238	8027	-3238	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTGGGACATCTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	85715721	85721722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660
ENSMUSG00000001785.14_85718777_85723177_1	chr10	+	436	5	ISM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	11082	1783	11082	-1783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGTGTCTTCAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	85718776	85723177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086
ENSMUSG00000001785.14_85720376_85723952_1	chr10	+	441	5	ISM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	12681	1008	12681	-1008	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGCGGCCCCTGTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	85720375	85723952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
ENSMUSG00000001785.14_85721705_85724137_1	chr10	+	428	3	ISM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	14010	823	14010	-823	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCACAGCCTTTGGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	85721704	85724137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85721783_85723086_85723193_85723893
ENSMUSG00000001785.14_85721746_85724211_1	chr10	+	461	3	ISM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	14051	749	14051	-749	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATGATTCCTTAACAG	NA	NA	NA	NA	NA	NA	NA	NA	85721745	85724211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85721783_85723086_85723193_85723893
ENSMUSG00000001785.14_85723164_85724336_1	chr10	+	472	2	ISM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	15469	624	15469	-624	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCAGTCCTGGGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	85723163	85724336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85723193_85723893
ENSMUSG00000001786.15_85860465_85884313_1	chr10	+	1606	8	ISM	ENSMUSG00000001786.15	ENSMUST00000117597.2	1799	9	2404	-126	2404	126	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCGTTGGTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	85860464	85884313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ENSMUSG00000001786.15_85866854_85884703_1	chr10	+	1596	6	ISM	ENSMUSG00000001786.15	ENSMUST00000117597.2	1799	9	8793	-516	8793	516	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAAATTGGAACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	85866853	85884703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ENSMUSG00000001786.15_85880285_85884986_1	chr10	+	1618	3	ISM	ENSMUSG00000001786.15	ENSMUST00000117597.2	1799	9	22224	-799	22224	799	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGAATGCTTTAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	85880284	85884986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85880464_85882636_85882675_85883585
ENSMUSG00000001786.15_85880375_85885041_1	chr10	+	1583	3	ISM	ENSMUSG00000001786.15	ENSMUST00000117597.2	1799	9	22314	-854	22314	854	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTGATCTAGAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	85880374	85885041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85880464_85882636_85882675_85883585
ENSMUSG00000001794.14_29886367_29893410_1	chr7	-	1271	10	ISM	ENSMUSG00000001794.14	ENSMUST00000126116.3	1429	11	1063	-1	102	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTAACTTGGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	29893410	29886366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302
ENSMUSG00000001794.14_29886593_29894461_1	chr7	-	1192	11	FSM	ENSMUSG00000001794.14	ENSMUST00000126116.3	1429	11	12	225	12	-178	multi-exon	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGATCACACCTGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	29894461	29886592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430
ENSMUSG00000001794.14_29886593_29898236_1	chr7	-	1374	12	FSM	ENSMUSG00000001794.14	ENSMUST00000001845.13	1600	12	0	226	0	-178	multi-exon	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGATCACACCTGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	29898236	29886592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430_29894590_29898182
ENSMUSG00000001794.14_29886908_29893512_1	chr7	-	742	9	FSM	ENSMUSG00000001794.14	ENST00000590874.5	765	9	0	23	0	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCTCACTATGGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	29893512	29886907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29892291_29892326_29893302
ENSMUSG00000001794.14_29886908_29893512_2	chr7	-	737	9	NNC	ENSMUSG00000001794.14	novel	765	9	NA	NA	0	-23	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCTCACTATGGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	29893512	29886907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_29886959_29887095_29887155_29889481_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29892291_29892326_29893302
ENSMUSG00000001815.16_74483335_74485872_1	chr2	-	1693	2	ISM	ENSMUSG00000001815.16	ENST00000308618.4	3342	4	4025	0	3891	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCAATTTTATTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	74485872	74483334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_74484912_74485756
ENSMUSG00000001815.16_74483453_74485968_1	chr2	-	1671	2	ISM	ENSMUSG00000001815.16	ENST00000308618.4	3342	4	3929	118	3795	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGGCTGTATGAACT	NA	NA	NA	NA	NA	NA	NA	NA	74485968	74483452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_74484912_74485756
ENSMUSG00000001815.16_74483524_74486032_1	chr2	-	1664	2	ISM	ENSMUSG00000001815.16	ENST00000308618.4	3342	4	3865	189	3731	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGTTAGGTCCATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	74486032	74483523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_74484912_74485756
ENSMUSG00000001815.16_74484285_74488244_1	chr2	-	1684	3	ISM	ENSMUSG00000001815.16	ENST00000308618.4	3342	4	1653	950	1519	-950	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCACTTCGCTCCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	74488244	74484284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_74484912_74485756_74486680_74488110
ENSMUSG00000001815.16_74484368_74488304_1	chr2	-	1661	3	ISM	ENSMUSG00000001815.16	ENST00000308618.4	3342	4	1593	1033	1459	-1033	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCTCTGTTAAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	74488304	74484367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_74484912_74485756_74486680_74488110
ENSMUSG00000001815.16_74484424_74488362_1	chr2	-	1663	3	ISM	ENSMUSG00000001815.16	ENST00000308618.4	3342	4	1535	1089	1401	-1089	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTATCATCTCAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	74488362	74484423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_74484912_74485756_74486680_74488110
ENSMUSG00000001815.16_74484617_74489513_1	chr2	-	1676	4	FSM	ENSMUSG00000001815.16	ENST00000308618.4	3342	4	384	1282	250	-1282	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGAATGTGGAATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	74489513	74484616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_74484912_74485756_74486680_74488110_74488392_74489336
ENSMUSG00000001815.16_74484723_74489611_1	chr2	-	1668	4	FSM	ENSMUSG00000001815.16	ENST00000308618.4	3342	4	286	1388	152	1237	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGGTACATCAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	74489611	74484722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_74484912_74485756_74486680_74488110_74488392_74489336
ENSMUSG00000001815.16_74484778_74489763_1	chr2	-	1765	4	FSM	ENSMUSG00000001815.16	ENST00000308618.4	3342	4	134	1443	0	1182	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGAGACCTGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	74489763	74484777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_74484912_74485756_74486680_74488110_74488392_74489336
ENSMUSG00000001815.16_74485757_74489901_1	chr2	-	1769	3	FSM	ENSMUSG00000001815.16	ENSMUST00000173623.2	1428	3	-138	-203	0	203	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTCCAACCTAGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	74489901	74485756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_74486680_74488110_74488392_74489336
ENSMUSG00000001829.18_101312840_101428570_1	chr7	+	1507	11	ISM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	0	10805	0	-8445	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAAGAGCAGCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	101312839	101428570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408
ENSMUSG00000001829.18_101312980_101435911_1	chr7	+	1690	14	ISM	ENSMUSG00000001829.18	ENST00000340729.9	2059	15	19	1104	0	-1104	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGCTACAACGTCCACT	NA	NA	NA	NA	NA	NA	NA	NA	101312979	101435911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101313421_101316454_101316507_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852
ENSMUSG00000001829.18_101313088_101436745_1	chr7	+	1662	15	FSM	ENSMUSG00000001829.18	ENST00000340729.9	2059	15	127	270	108	-270	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGAGCAGGACCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	101313087	101436745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_101313421_101316454_101316507_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUSG00000001829.18_101313166_101436804_1	chr7	+	1643	15	FSM	ENSMUSG00000001829.18	ENST00000340729.9	2059	15	205	211	186	-211	multi-exon	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGCACCTCCTCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	101313165	101436804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_101313421_101316454_101316507_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUSG00000001829.18_101313166_101436897_1	chr7	+	1730	15	NNC	ENSMUSG00000001829.18	novel	2059	15	NA	NA	186	-118	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCCGCAAACTGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	101313165	101436897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_101313421_101316454_101316507_101355689_101355794_101371917_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUSG00000001829.18_101313166_101436897_2	chr7	+	1730	15	NNC	ENSMUSG00000001829.18	novel	2059	15	NA	NA	186	-118	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCCGCAAACTGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	101313165	101436897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_101313421_101316454_101316507_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412897_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUSG00000001829.18_101313265_101435911_1	chr7	+	1492	15	ISM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	425	3464	285	-1104	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGCTACAACGTCCACT	NA	NA	NA	NA	NA	NA	NA	NA	101313264	101435911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852
ENSMUSG00000001829.18_101313265_101436897_1	chr7	+	1637	15	FSM	ENSMUSG00000001829.18	ENST00000340729.9	2059	15	304	118	285	-118	multi-exon	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCCGCAAACTGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	101313264	101436897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_101313421_101316454_101316507_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUSG00000001829.18_101316454_101437017_1	chr7	+	1602	14	ISM	ENSMUSG00000001829.18	ENST00000340729.9	2059	15	3493	-2	3474	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATCCACCTTGCCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	101316453	101437017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101316507_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUSG00000001829.18_101336493_101436745_1	chr7	+	1366	14	ISM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	23653	2630	23513	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGAGCAGGACCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	101336492	101436745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUSG00000001829.18_101412786_101437186_1	chr7	+	1389	10	ISM	ENSMUSG00000001829.18	ENST00000340729.9	2059	15	99825	-171	99806	169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGCTCAGAAACATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	101412785	101437186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUSG00000001829.18_101412813_101437236_1	chr7	+	1412	10	ISM	ENSMUSG00000001829.18	ENST00000340729.9	2059	15	99852	-221	99833	219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGCAGTGGTGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	101412812	101437236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUSG00000001829.18_101412813_101437309_1	chr7	+	1485	10	ISM	ENSMUSG00000001829.18	ENST00000340729.9	2059	15	99852	-294	99833	292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCCAGGAGCCCCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	101412812	101437309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUSG00000001829.18_101428514_101437608_1	chr7	+	1410	6	ISM	ENSMUSG00000001829.18	ENST00000340729.9	2059	15	115553	-593	115534	591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACTGCCGTCCCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	101428513	101437608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUSG00000001829.18_101434653_101437766_1	chr7	+	1393	5	ISM	ENSMUSG00000001829.18	ENST00000340729.9	2059	15	121692	-751	121673	749	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAAGATGTTTAGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	101434652	101437766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUSG00000001829.18_101435895_101438038_1	chr7	+	1390	2	ISM	ENSMUSG00000001829.18	ENST00000340729.9	2059	15	122934	-1023	122915	1021	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACACACTCCTGCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	101435894	101438038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101435958_101436711
ENSMUSG00000001829.18_101435941_101438119_1	chr7	+	1425	2	ISM	ENSMUSG00000001829.18	ENST00000340729.9	2059	15	122980	-1104	122961	1102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTGTGTCGCCCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	101435940	101438119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101435958_101436711
ENSMUSG00000001833.18_25163735_25205102_1	chr9	+	829	6	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	0	5474	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAATTAATTAACTTAC	NA	NA	NA	NA	NA	NA	NA	NA	25163734	25205102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980
ENSMUSG00000001833.18_25163872_25209204_1	chr9	+	878	8	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	-41	-3623	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTTCTTTTCAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	25163871	25209204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107
ENSMUSG00000001833.18_25163872_25218815_1	chr9	+	1236	12	FSM	ENSMUSG00000001833.18	ENST00000435235.6	1550	12	82	232	-41	-232	multi-exon	FALSE	canonical	NA	NA	NA	NA	2663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAACAAGAAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	25163871	25218815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_25163996_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ENSMUSG00000001833.18_25176690_25212765_1	chr9	+	864	9	ISM	ENSMUSG00000001833.18	ENSMUST00000165594.4	2516	14	12943	7097	-12138	-62	internal_fragment	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAAAGCTAGCAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	25176689	25212765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707
ENSMUSG00000001833.18_25188839_25212827_1	chr9	+	272	2	FSM	ENSMUSG00000001833.18	ENST00000437076.1	290	2	11	7	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAAGTACGTATATAACT	NA	NA	NA	NA	NA	NA	NA	NA	25188838	25212827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_25188955_25212671
ENSMUSG00000001833.18_25188839_25212827_2	chr9	+	228	2	FSM	ENSMUSG00000001833.18	ENST00000613964.2	225	2	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAAGTACGTATATAACT	NA	NA	NA	NA	NA	NA	NA	NA	25188838	25212827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_25188947_25212707
ENSMUSG00000001833.18_25188839_25212827_3	chr9	+	227	2	NNC	ENSMUSG00000001833.18	novel	225	2	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAAGTACGTATATAACT	NA	NA	NA	NA	NA	NA	NA	NA	25188838	25212827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_25188947_25212708
ENSMUSG00000001833.18_25188896_25219047_1	chr9	+	1288	11	ISM	ENSMUSG00000001833.18	ENST00000435235.6	1550	12	25106	0	53	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTAAGTACCTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	25188895	25219047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ENSMUSG00000001833.18_25212706_25219182_1	chr9	+	778	4	ISM	ENSMUSG00000001833.18	ENST00000435235.6	1550	12	48916	-135	23863	135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGGACTCTGGAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	25212705	25219182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_25212834_25215012_25215149_25217421_25217562_25218808
ENSMUSG00000001833.18_25212737_25219253_1	chr9	+	818	4	ISM	ENSMUSG00000001833.18	ENST00000435235.6	1550	12	48947	-206	23894	206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTATAATACAGAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	25212736	25219253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_25212834_25215012_25215149_25217421_25217562_25218808
ENSMUSG00000001833.18_25212774_25219317_1	chr9	+	845	4	ISM	ENSMUSG00000001833.18	ENST00000435235.6	1550	12	48984	-270	23931	270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTATTTTTTGACACT	NA	NA	NA	NA	NA	NA	NA	NA	25212773	25219317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_25212834_25215012_25215149_25217421_25217562_25218808
ENSMUSG00000001833.18_25215098_25219434_1	chr9	+	817	3	ISM	ENSMUSG00000001833.18	ENST00000435235.6	1550	12	51308	-387	26255	387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTTTAAATATATAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	25215097	25219434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_25215149_25217421_25217562_25218808
ENSMUSG00000001844.11_143302245_143310713_1	chr5	-	967	5	ISM	ENSMUSG00000001844.11	ENSMUST00000161915.8	1216	6	1396	-7	1396	-1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	NA	NA	NA	NA	NA	NA	NA	NA	143310713	143302244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639
ENSMUSG00000001844.11_143302366_143311886_1	chr5	-	879	6	FSM	ENSMUSG00000001844.11	ENSMUST00000161915.8	1216	6	223	114	223	-114	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTTAGGAGCAACCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	143311886	143302365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853
ENSMUSG00000001844.11_143302475_143314169_1	chr5	-	886	7	ISM	ENSMUSG00000001844.11	ENSMUST00000001900.9	1364	8	842	231	842	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCACAAATGAATGGTATA	NA	NA	NA	NA	NA	NA	NA	NA	143314169	143302474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145
ENSMUSG00000001844.11_143302527_143314220_1	chr5	-	885	7	ISM	ENSMUSG00000001844.11	ENSMUST00000001900.9	1364	8	791	283	791	-275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCTGGCTGGCTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	143314220	143302526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145
ENSMUSG00000001844.11_143302573_143314324_1	chr5	-	943	7	ISM	ENSMUSG00000001844.11	ENSMUST00000001900.9	1364	8	687	329	687	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAAGGATTGTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	143314324	143302572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145
ENSMUSG00000001844.11_143305986_143314947_1	chr5	-	956	7	ISM	ENSMUSG00000001844.11	ENSMUST00000001900.9	1364	8	64	3742	64	-3734	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTTGCGGTGGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	143314947	143305985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
ENSMUSG00000001844.11_143306137_143314947_1	chr5	-	805	7	ISM	ENSMUSG00000001844.11	ENSMUST00000001900.9	1364	8	64	3893	64	-3885	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGACGCTGACGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	143314947	143306136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
ENSMUSG00000001847.15_143492377_143493913_1	chr5	-	707	3	ISM	ENSMUSG00000001847.15	ENSMUST00000100489.4	2325	7	19835	1140	19835	-1140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGCAGCTTCTGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	143493913	143492376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143492861_143493081_143493242_143493850
ENSMUSG00000001847.15_143492518_143500541_1	chr5	-	684	4	ISM	ENSMUSG00000001847.15	ENSMUST00000080537.14	4159	6	13250	3129	13207	-1281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGCCTTCTTAAAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	143500541	143492517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143492861_143493081_143493242_143493850_143493914_143500423
ENSMUSG00000001847.15_143492518_143502984_1	chr5	-	756	5	ISM	ENSMUSG00000001847.15	ENSMUST00000080537.14	4159	6	10807	3129	10764	-1281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGCCTTCTTAAAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	143502984	143492517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143492861_143493081_143493242_143493850_143493914_143500423_143500542_143502912
ENSMUSG00000001847.15_143492815_143513758_1	chr5	-	700	6	FSM	ENSMUSG00000001847.15	ENSMUST00000080537.14	4159	6	33	3426	-10	-1578	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACAGTGTTTGACGAAG	NA	NA	NA	NA	NA	NA	NA	NA	143513758	143492814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_143492861_143493081_143493242_143493850_143493914_143500423_143500542_143502912_143502985_143513517
ENSMUSG00000001855.16_31923595_31929488_1	chr2	+	1612	3	ISM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	59147	12895	382	-8100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTGAGAAGAGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	31923594	31929488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31924982_31928113_31928185_31929334
ENSMUSG00000001855.16_31923743_31937486_1	chr2	+	1689	5	ISM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	59295	4897	530	-102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATTCGGTTCAGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	31923742	31937486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31924982_31928113_31928185_31929334_31929489_31932428_31932582_31937414
ENSMUSG00000001855.16_31923988_31937586_1	chr2	+	1544	5	ISM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	59540	4797	775	-2	internal_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTGCAGGTGGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	31923987	31937586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31924982_31928113_31928185_31929334_31929489_31932428_31932582_31937414
ENSMUSG00000001864.14_31840151_31861167_1	chr2	+	830	6	FSM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	0	2287	0	-77	multi-exon	FALSE	canonical	NA	NA	NA	NA	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGAGCCTCAGGCCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	31840150	31861167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
ENSMUSG00000001864.14_31840346_31861009_1	chr2	+	404	6	FSM	ENSMUSG00000001864.14	ENST00000372300.5	388	6	-15	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGACCTTCCGGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	31840345	31861009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859732_31860914
ENSMUSG00000001864.14_31840346_31861350_1	chr2	+	818	6	FSM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	195	2104	0	106	multi-exon	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATCCAGAGCAGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	31840345	31861350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
ENSMUSG00000001864.14_31855093_31861533_1	chr2	+	814	3	ISM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	14942	1921	14732	289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACTTCAGAGGAACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	31855092	31861533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31855125_31859641_31859805_31860914
ENSMUSG00000001864.14_31859753_31861654_1	chr2	+	792	2	ISM	ENSMUSG00000001864.14	ENSMUST00000148056.4	670	5	19407	-410	19392	410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGAGTCCTACTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	31859752	31861654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31859805_31860914
ENSMUSG00000001870.17_75596971_75697402_1	chr17	+	2439	19	ISM	ENSMUSG00000001870.17	ENSMUST00000112514.2	4870	30	111065	919	111065	-919	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCTGCAAGAACGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	75596970	75697402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ENSMUSG00000001870.17_75628014_75698323_1	chr17	+	2409	12	ISM	ENSMUSG00000001870.17	ENSMUST00000112514.2	4870	30	142108	-2	142108	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTGAGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	75628013	75698323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ENSMUSG00000001891.17_21271673_21303456_1	chr11	-	1729	8	ISM	ENSMUSG00000001891.17	ENSMUST00000102875.11	2683	10	17021	535	953	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTGTCTAGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	21303456	21271672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348
ENSMUSG00000001891.17_21271782_21273306_1	chr11	-	421	2	ISM	ENSMUSG00000001891.17	ENST00000613823.2	1715	9	31103	-1	31103	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACCTCAGAATCGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	21273306	21271781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21272095_21273198
ENSMUSG00000001891.17_21271782_21304406_1	chr11	-	1748	9	ISM	ENSMUSG00000001891.17	ENSMUST00000102875.11	2683	10	16071	644	3	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACCTCAGAATCGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	21304406	21271781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278
ENSMUSG00000001891.17_21271940_21321201_1	chr11	-	1777	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	0	267	0	-157	multi-exon	FALSE	canonical	NA	NA	NA	NA	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGTACTTTATTTACT	NA	NA	NA	NA	NA	NA	NA	NA	21321201	21271939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
ENSMUSG00000001891.17_21272061_21279771_1	chr11	-	429	4	ISM	ENSMUSG00000001891.17	ENST00000613823.2	1715	9	24638	278	24638	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTGTATCTGGAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	21279771	21272060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21272095_21273198_21273304_21278870_21279114_21279724
ENSMUSG00000001891.17_21282411_21320236_1	chr11	-	611	5	ISM	ENSMUSG00000001891.17	ENSMUST00000102875.11	2683	10	241	11273	241	-10628	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATAAAAATAATTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	21320236	21282410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21320186
ENSMUSG00000001891.17_21282474_21320285_1	chr11	-	597	5	ISM	ENSMUSG00000001891.17	ENSMUST00000102875.11	2683	10	192	11336	192	-10691	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTCCAGAAGTACAAT	NA	NA	NA	NA	NA	NA	NA	NA	21320285	21282473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21320186
ENSMUSG00000001891.17_21282530_21320332_1	chr11	-	588	5	ISM	ENSMUSG00000001891.17	ENSMUST00000102875.11	2683	10	145	11392	145	-10747	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGATGTTCCTCTCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	21320332	21282529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21320186
ENSMUSG00000001909.17_85415495_85424188_1	chr8	+	1839	11	ISM	ENSMUSG00000001909.17	ENSMUST00000001974.11	2567	17	0	2249	0	-2226	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAGCTGGACCTACACA	NA	NA	NA	NA	NA	NA	NA	NA	85415494	85424188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053
ENSMUSG00000001909.17_85415608_85424339_1	chr8	+	1791	12	ISM	ENSMUSG00000001909.17	ENSMUST00000001974.11	2567	17	113	2098	113	-2075	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCGCCTTCTGCAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	85415607	85424339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274
ENSMUSG00000001909.17_85415751_85425098_1	chr8	+	1855	14	ISM	ENSMUSG00000001909.17	ENSMUST00000001974.11	2567	17	256	1339	-125	-1316	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGACAGCTATGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	85415750	85425098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021
ENSMUSG00000001909.17_85415915_85425887_1	chr8	+	1708	15	ISM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	22	528	22	-527	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGTAATGTTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	85415914	85425887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85415979_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767
ENSMUSG00000001909.17_85415915_85426014_1	chr8	+	1856	16	ISM	ENSMUSG00000001909.17	ENSMUST00000001974.11	2567	17	420	423	22	-400	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	723	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAATAAGAGGAAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	85415914	85426014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969
ENSMUSG00000001909.17_85416261_85426280_1	chr8	+	1899	16	ISM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	368	135	168	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGGCCTCTGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	85416260	85426280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUSG00000001909.17_85416485_85426439_2	chr8	+	1834	16	ISM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	592	-24	392	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCTGCATGGGGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	85416484	85426439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUSG00000001910.6_85398808_85403347_1	chr8	-	1882	5	ISM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	11184	1700	11184	-1700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGCCCCCTCAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	85403347	85398807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969
ENSMUSG00000001911.17_85434365_85440411_1	chr8	-	959	2	ISM	ENSMUSG00000001911.17	ENST00000587760.5	1496	10	59614	-808	59614	808	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCGGCTGAGAGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	85440411	85434364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85435307_85440394
ENSMUSG00000001911.17_85434489_85442836_1	chr8	-	977	3	ISM	ENSMUSG00000001911.17	ENSMUST00000109764.8	5476	11	57189	3148	57189	684	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTGCCACGCCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	85442836	85434488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85435307_85440394_85440487_85442769
ENSMUSG00000001911.17_85434725_85448439_1	chr8	-	990	4	ISM	ENSMUSG00000001911.17	ENSMUST00000109764.8	5476	11	51586	3384	51586	448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCTGGACCAGGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	85448439	85434724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85435307_85440394_85440487_85442769_85442918_85448271
ENSMUSG00000001911.17_85434846_85450434_1	chr8	-	955	5	ISM	ENSMUSG00000001911.17	ENSMUST00000109764.8	5476	11	49591	3505	49591	327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCGTAACAATAGTAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	85450434	85434845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85435307_85440394_85440487_85442769_85442918_85448271_85448448_85450356
ENSMUSG00000001911.17_85434998_85453204_1	chr8	-	955	6	ISM	ENSMUSG00000001911.17	ENSMUST00000109764.8	5476	11	46821	3657	46821	175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAGAAAGGATGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	85453204	85434997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85435307_85440394_85440487_85442769_85442918_85448271_85448448_85450356_85450480_85453097
ENSMUSG00000001911.17_85435243_85454308_1	chr8	-	936	8	ISM	ENSMUSG00000001911.17	ENSMUST00000109764.8	5476	11	45717	3902	45717	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTCCTCAAAATGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	85454308	85435242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85435307_85440394_85440487_85442769_85442918_85448271_85448448_85450356_85450480_85453097_85453235_85453752_85453874_85454233
ENSMUSG00000001911.17_85435243_85500025_1	chr8	-	1426	10	FSM	ENSMUSG00000001911.17	ENST00000587760.5	1496	10	0	70	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTCCTCAAAATGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	85500025	85435242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85435307_85440394_85440487_85448271_85448448_85450356_85450480_85453097_85453235_85453752_85453874_85454233_85454309_85454533_85454597_85498412_85498945_85499982
ENSMUSG00000001911.17_85435243_85500324_1	chr8	-	1599	9	FSM	ENSMUSG00000001911.17	ENSMUST00000109762.8	2261	9	674	-12	-299	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTCCTCAAAATGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	85500324	85435242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85435307_85440394_85440487_85448271_85448448_85453097_85453232_85453752_85453874_85454233_85454309_85454533_85454597_85498412_85498945_85499982
ENSMUSG00000001911.17_85435263_85500430_1	chr8	-	1685	9	FSM	ENSMUSG00000001911.17	ENSMUST00000109762.8	2261	9	568	8	-405	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGGAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	85500430	85435262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85435307_85440394_85440487_85448271_85448448_85453097_85453232_85453752_85453874_85454233_85454309_85454533_85454597_85498412_85498945_85499982
ENSMUSG00000001911.17_85440424_85498481_1	chr8	-	975	9	ISM	ENSMUSG00000001911.17	ENSMUST00000109764.8	5476	11	1544	9083	1544	-5169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCTGAACATCCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	85498481	85440423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85440487_85442769_85442918_85448271_85448448_85450356_85450480_85453097_85453235_85453752_85453874_85454233_85454309_85454533_85454597_85498412
ENSMUSG00000001911.17_85442843_85498630_1	chr8	-	988	8	ISM	ENSMUSG00000001911.17	ENSMUST00000109764.8	5476	11	1395	11502	1395	-7588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTCCTATGCCTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	85498630	85442842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85442918_85448271_85448448_85450356_85450480_85453097_85453235_85453752_85453874_85454233_85454309_85454533_85454597_85498412
ENSMUSG00000001911.17_85448393_85500587_1	chr8	-	1585	7	ISM	ENSMUSG00000001911.17	ENSMUST00000109762.8	2261	9	411	13138	411	-13138	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCGAGCCCGTATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	85500587	85448392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85448448_85453097_85453232_85453752_85453874_85454233_85454309_85454533_85454597_85498412_85498945_85499982
ENSMUSG00000001911.17_85453140_85500674_1	chr8	-	1578	6	ISM	ENSMUSG00000001911.17	ENST00000587760.5	1496	10	-649	17967	324	-17885	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCAGCCAGTCTAGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	85500674	85453139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85453235_85453752_85453874_85454233_85454309_85454533_85454597_85498412_85498945_85499982
ENSMUSG00000001911.17_85453788_85500823_1	chr8	-	1597	5	ISM	ENSMUSG00000001911.17	ENSMUST00000109762.8	2261	9	175	18533	175	-18533	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGCGGTCCATCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	85500823	85453787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85453874_85454233_85454309_85454533_85454597_85498412_85498945_85499982
ENSMUSG00000001911.17_85454234_85500998_1	chr8	-	1686	4	ISM	ENSMUSG00000001911.17	ENSMUST00000109762.8	2261	9	0	18979	0	-18979	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGATGTCCTCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	85500998	85454233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85454309_85454533_85454597_85498412_85498945_85499982
ENSMUSG00000001918.18_16516023_16523802_1	chr7	+	609	5	ISM	ENSMUSG00000001918.18	ENSMUST00000108496.9	2764	9	758	8397	758	-8397	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCGTTTCTTCAACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	16516022	16523802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523701
ENSMUSG00000001918.18_16527700_16531608_1	chr7	+	618	4	ISM	ENSMUSG00000001918.18	ENSMUST00000108496.9	2764	9	12435	591	12435	-591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGGACCCACCGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	16527699	16531608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_16527806_16529682_16529878_16529948_16530084_16531426
ENSMUSG00000001918.18_16529823_16531852_1	chr7	+	616	3	ISM	ENSMUSG00000001918.18	ENSMUST00000108496.9	2764	9	14558	347	14558	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGTCCACAAATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	16529822	16531852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_16529878_16529948_16530084_16531426
ENSMUSG00000001924.16_20524660_20549132_1	chrX	+	3663	26	FSM	ENSMUSG00000001924.16	ENSMUST00000089217.11	4044	26	95	286	95	-286	multi-exon	FALSE	canonical	NA	NA	NA	NA	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAATATGATTTAAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	20524659	20549132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ENSMUSG00000001924.16_20524660_20549192_1	chrX	+	3723	26	FSM	ENSMUSG00000001924.16	ENSMUST00000089217.11	4044	26	95	226	95	-226	multi-exon	FALSE	canonical	NA	NA	NA	NA	1504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCCTCCATCCACTAT	NA	NA	NA	NA	NA	NA	NA	NA	20524659	20549192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ENSMUSG00000001924.16_20524660_20549254_1	chrX	+	3785	26	FSM	ENSMUSG00000001924.16	ENSMUST00000089217.11	4044	26	95	164	95	-164	multi-exon	FALSE	canonical	NA	NA	NA	NA	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCAGCTCTTAAGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	20524659	20549254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ENSMUSG00000001924.16_20529137_20535456_1	chrX	+	663	5	ISM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	0	13962	0	-13962	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTACACTGGGCCTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	20529136	20535456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366
ENSMUSG00000001924.16_20529296_20536542_1	chrX	+	649	6	ISM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	159	12876	159	-12876	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGGTGAGTGCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	20529295	20536542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442
ENSMUSG00000001924.16_20534931_20549420_1	chrX	+	3728	24	ISM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	5794	-2	5794	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGTTCGCATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	20534930	20549420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ENSMUSG00000001924.16_20545967_20548444_1	chrX	+	628	6	ISM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	16830	974	16830	-974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGTGAGTAGGCTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	20545966	20548444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347
ENSMUSG00000001924.16_20548411_20549222_1	chrX	+	644	2	ISM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	19274	196	19274	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACAGTGATCAGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	20548410	20549222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20548449_20548616
ENSMUSG00000001962.9_73356639_73363755_1	chrX	+	1377	13	NNC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGAACCTGCGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73356638	73363755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361979_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ENSMUSG00000001962.9_73356639_73363755_2	chrX	+	1377	13	NNC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGAACCTGCGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73356638	73363755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361804_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ENSMUSG00000001962.9_73356639_73363755_3	chrX	+	1375	13	NNC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGAACCTGCGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73356638	73363755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362663_73362705_73362796_73362868_73362997_73363109_73363565
ENSMUSG00000001962.9_73356639_73363755_4	chrX	+	1373	13	NNC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGAACCTGCGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73356638	73363755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362041_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ENSMUSG00000001962.9_73356639_73363755_5	chrX	+	1377	13	NNC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGAACCTGCGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73356638	73363755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361753_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ENSMUSG00000001962.9_73356639_73363755_6	chrX	+	1377	13	NNC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGAACCTGCGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73356638	73363755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361248_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ENSMUSG00000001962.9_73356639_73363755_7	chrX	+	1375	13	NNC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGAACCTGCGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73356638	73363755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_73356932_73358282_73358368_73358469_73358570_73359040_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ENSMUSG00000001962.9_73356639_73363755_8	chrX	+	1378	13	NNC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGAACCTGCGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73356638	73363755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362425_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ENSMUSG00000001964.15_73298358_73301222_1	chrX	+	1259	6	FSM	ENSMUSG00000001964.15	ENSMUST00000002029.13	1595	6	65	271	0	255	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGAAAACTTGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	73298357	73301222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73300612
ENSMUSG00000001964.15_73298555_73304611_1	chrX	+	676	6	FSM	ENSMUSG00000001964.15	ENSMUST00000088313.5	1338	6	119	543	119	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTCCACCGAGGATAAGG	NA	NA	NA	NA	NA	NA	NA	NA	73298554	73304611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73304387
ENSMUSG00000001964.15_73298626_73304684_1	chrX	+	678	6	FSM	ENSMUSG00000001964.15	ENSMUST00000088313.5	1338	6	190	470	190	73	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAGTAAGGGTGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	73298625	73304684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73304387
ENSMUSG00000001964.15_73298813_73301493_1	chrX	+	1249	5	ISM	ENSMUSG00000001964.15	ENSMUST00000002029.13	1595	6	520	0	377	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTATGTTTTGGTTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	73298812	73301493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73300612
ENSMUSG00000001986.17_40490116_40512888_1	chrX	+	471	4	NNC	ENSMUSG00000001986.17	novel	514	4	NA	NA	48	8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATCTCAAAGCTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	40490115	40512888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_40490135_40490405_40490533_40491677_40491943_40512828
ENSMUSG00000001986.17_40490181_40512888_2	chrX	+	680	3	FSM	ENSMUSG00000001986.17	ENST00000611689.4	640	3	-32	-8	0	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATCTCAAAGCTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	40490180	40512888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_40490533_40491677_40491946_40512828
ENSMUSG00000001988.10_16189829_16197216_1	chr7	-	1022	7	FSM	ENSMUSG00000001988.10	ENST00000439365.6	1223	7	128	73	128	-73	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACCCTACGCTGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	16197216	16189828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_16190230_16193110_16193206_16194730_16194832_16195254_16195362_16195705_16195864_16196074_16196191_16197172
ENSMUSG00000001988.10_16189883_16197263_1	chr7	-	1015	7	FSM	ENSMUSG00000001988.10	ENST00000439365.6	1223	7	81	127	81	-127	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTATCCACATCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	16197263	16189882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_16190230_16193110_16193206_16194730_16194832_16195254_16195362_16195705_16195864_16196074_16196191_16197172
ENSMUSG00000001988.10_16189928_16197322_1	chr7	-	1029	7	FSM	ENSMUSG00000001988.10	ENST00000439365.6	1223	7	22	172	22	-172	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCACCCCAGGCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	16197322	16189927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_16190230_16193110_16193206_16194730_16194832_16195254_16195362_16195705_16195864_16196074_16196191_16197172
ENSMUSG00000001995.10_126145083_126148687_1	chr8	-	1016	2	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	70659	278	70659	-268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGTCTTGTATTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	126148687	126145082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126146031_126148619
ENSMUSG00000001995.10_126145266_126159961_1	chr8	-	1016	4	ISM	ENSMUSG00000001995.10	ENST00000674749.1	6209	20	59385	461	59385	-451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATATGCCTTGTGAACG	NA	NA	NA	NA	NA	NA	NA	NA	126159961	126145265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916
ENSMUSG00000001995.10_126145326_126160002_1	chr8	-	997	4	ISM	ENSMUSG00000001995.10	ENST00000674749.1	6209	20	59344	521	59344	-511	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGCAGGAACAAACGGT	NA	NA	NA	NA	NA	NA	NA	NA	126160002	126145325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916
ENSMUSG00000001995.10_126145436_126166063_1	chr8	-	994	5	ISM	ENSMUSG00000001995.10	ENSMUST00000212168.2	6586	22	130432	623	53283	-621	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTATCATAGCAATAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	126166063	126145435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002
ENSMUSG00000001995.10_126145499_126166126_1	chr8	-	994	5	ISM	ENSMUSG00000001995.10	ENSMUST00000212168.2	6586	22	130369	686	53220	-684	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTACTTTAATGTTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	126166126	126145498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002
ENSMUSG00000001995.10_126145550_126166187_1	chr8	-	1004	5	ISM	ENSMUSG00000001995.10	ENSMUST00000212168.2	6586	22	130308	737	53159	-735	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCAGGGCTGTAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	126166187	126145549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002
ENSMUSG00000001995.10_126145655_126169380_1	chr8	-	993	6	ISM	ENSMUSG00000001995.10	ENSMUST00000212168.2	6586	22	127115	842	49966	-840	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGACAGCCTGTAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	126169380	126145654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321
ENSMUSG00000001995.10_126145777_126171267_1	chr8	-	1009	7	ISM	ENSMUSG00000001995.10	ENSMUST00000212168.2	6586	22	125228	964	48079	-962	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCATCACCTGTAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	126171267	126145776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224
ENSMUSG00000001995.10_126145833_126171315_1	chr8	-	1001	7	ISM	ENSMUSG00000001995.10	ENSMUST00000212168.2	6586	22	125180	1020	48031	-1018	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACCCTGCCTACCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	126171315	126145832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224
ENSMUSG00000001995.10_126145894_126159967_1	chr8	-	448	5	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	59379	1089	59379	-1079	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCCTGATCAGCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	126159967	126145893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126146031_126148619_126148702_126149317_126149442_126149931_126149986_126159916
ENSMUSG00000001995.10_126145925_126171426_1	chr8	-	1020	7	ISM	ENSMUSG00000001995.10	ENSMUST00000212168.2	6586	22	125069	1112	47920	-1110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCGAGTGGTTTTTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	126171426	126145924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224
ENSMUSG00000001995.10_126148649_126174334_1	chr8	-	997	7	ISM	ENSMUSG00000001995.10	ENSMUST00000212168.2	6586	22	122161	3836	45012	-3834	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGACAACTGCAGACTGAC	NA	NA	NA	NA	NA	NA	NA	NA	126174334	126148648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245
ENSMUSG00000001995.10_126159998_126174613_1	chr8	-	1018	5	ISM	ENSMUSG00000001995.10	ENSMUST00000108775.2	6365	21	44836	15196	44733	-15183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCCTGATGCCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	126174613	126159997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245
ENSMUSG00000001995.10_126166145_126177172_1	chr8	-	1048	6	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	42174	21340	42174	-21330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGCTCTTCCTTTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	126177172	126166144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071
ENSMUSG00000001995.10_126174348_126191061_1	chr8	-	1002	6	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	28285	29543	28285	-29533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCCAAGATGTATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	126191061	126174347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890
ENSMUSG00000001995.10_126174492_126194959_1	chr8	-	1008	7	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	24387	29687	24387	-29677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCACCGACAGCGGCATCG	NA	NA	NA	NA	NA	NA	NA	NA	126194959	126174491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913
ENSMUSG00000001995.10_126174553_126195011_1	chr8	-	999	7	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	24335	29748	24335	-29738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGGTCAGGGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	126195011	126174552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913
ENSMUSG00000001995.10_126178683_126195323_1	chr8	-	1002	4	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	24023	33878	24023	-33868	internal_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGCCACAAGTGGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	126195323	126178682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126178742_126180039_126180298_126190890_126191166_126194913
ENSMUSG00000001995.10_126180199_126195027_1	chr8	-	488	3	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	24319	35394	24319	-35384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCACCGTGTGCCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	126195027	126180198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126180298_126190890_126191166_126194913
ENSMUSG00000001995.10_126180224_126196556_1	chr8	-	996	4	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	22790	35419	22790	-35409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACACCTTTTAGGAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	126196556	126180223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126180298_126190890_126191166_126194913_126195491_126196486
ENSMUSG00000001995.10_126191088_126201646_1	chr8	-	1001	5	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	17700	46283	17700	-46273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAGGAATTGTTGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	126201646	126191087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562
ENSMUSG00000001995.10_126195014_126206982_1	chr8	-	1004	5	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	12364	50209	12364	-50199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGCATCAAAGCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	126206982	126195013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892
ENSMUSG00000001995.10_126195057_126207054_1	chr8	-	1033	5	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	12292	50252	12292	-50242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGTTCCTGTAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	126207054	126195056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892
ENSMUSG00000001995.10_126195224_126208899_1	chr8	-	1006	6	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	10447	50419	10447	-50409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGCGGGTAAAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	126208899	126195223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786
ENSMUSG00000001995.10_126195327_126217931_1	chr8	-	1006	7	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	1415	50522	1415	-50512	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAGGCAAGAATACTTG	NA	NA	NA	NA	NA	NA	NA	NA	126217931	126195326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849
ENSMUSG00000001995.10_126195386_126217980_1	chr8	-	996	7	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	1366	50581	1366	-50571	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGATCAATGCAGAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	126217980	126195385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849
ENSMUSG00000001995.10_126195408_126218062_1	chr8	-	1056	7	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	1284	50603	1284	-50593	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGACTTCCTTTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	126218062	126195407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849
ENSMUSG00000001995.10_126196567_126218198_1	chr8	-	1029	6	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	1148	51762	1148	-51752	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACATTCGTTCACACTT	NA	NA	NA	NA	NA	NA	NA	NA	126218198	126196566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849
ENSMUSG00000001995.10_126201676_126218470_1	chr8	-	1006	4	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	876	56871	876	-56861	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTACAACAACGAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	126218470	126201675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126201738_126206892_126207082_126208786_126208921_126217849
ENSMUSG00000001995.10_126206927_126218592_1	chr8	-	1032	3	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	754	62122	754	-62112	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGCAGCTGCTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	126218592	126206926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_126207082_126208786_126208921_126217849
ENSMUSG00000001999.16_126912613_126939004_1	chr2	+	1129	8	NNC	ENSMUSG00000001999.16	novel	1160	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAATAGTGTTGATGACT	NA	NA	NA	NA	NA	NA	NA	NA	126912612	126939004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_126912646_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
ENSMUSG00000001999.16_126922448_126939004_1	chr2	+	1093	7	NNC	ENSMUSG00000001999.16	novel	1160	8	NA	NA	9835	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAATAGTGTTGATGACT	NA	NA	NA	NA	NA	NA	NA	NA	126922447	126939004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_126922579_126924851_126924971_126927887_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
ENSMUSG00000001999.16_126922448_126939004_2	chr2	+	1090	7	NNC	ENSMUSG00000001999.16	novel	1160	8	NA	NA	9835	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1080	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAATAGTGTTGATGACT	NA	NA	NA	NA	NA	NA	NA	NA	126922447	126939004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_126922571_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
ENSMUSG00000001999.16_126922448_126939004_3	chr2	+	1092	7	NNC	ENSMUSG00000001999.16	novel	1160	8	NA	NA	9835	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAATAGTGTTGATGACT	NA	NA	NA	NA	NA	NA	NA	NA	126922447	126939004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_126922579_126924857_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
ENSMUSG00000002007.6_72818221_72822531_1	chrX	+	1848	14	ISM	ENSMUSG00000002007.6	ENSMUST00000002081.6	1981	15	210	0	34	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGTGTCTTGGAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	72818220	72822531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72818321_72818498_72818608_72818709_72818798_72819083_72819172_72819625_72819733_72819803_72819970_72820066_72820093_72820575_72820706_72820793_72821034_72821114_72821216_72821529_72821638_72821710_72821781_72821859_72821953_72822109
ENSMUSG00000002007.6_72818221_72822531_2	chrX	+	1840	13	NNC	ENSMUSG00000002007.6	novel	1884	14	NA	NA	34	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGTGTCTTGGAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	72818220	72822531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_72818321_72818498_72818608_72818709_72818798_72819083_72819172_72819625_72819733_72819803_72819985_72820572_72820706_72820793_72821034_72821114_72821216_72821529_72821638_72821710_72821781_72821859_72821953_72822109
ENSMUSG00000002007.6_72818278_72822531_3	chrX	+	1791	14	ISM	ENSMUSG00000002007.6	ENSMUST00000002081.6	1981	15	267	0	91	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGTGTCTTGGAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	72818277	72822531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72818321_72818498_72818608_72818709_72818798_72819083_72819172_72819625_72819733_72819803_72819970_72820066_72820093_72820575_72820706_72820793_72821034_72821114_72821216_72821529_72821638_72821710_72821781_72821859_72821953_72822109
ENSMUSG00000002007.6_72819870_72820990_1	chrX	+	354	5	ISM	ENSMUSG00000002007.6	ENST00000393786.7	1782	15	1683	1540	1683	-1540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTAATCAGCGTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	72819869	72820990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72819970_72820066_72820093_72820575_72820706_72820793_72820842_72820940
ENSMUSG00000002007.6_72820640_72821583_1	chrX	+	362	5	ISM	ENSMUSG00000002007.6	ENST00000393786.7	1782	15	2453	947	2453	-947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATCGGTGCCGAGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	72820639	72821583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72820706_72820793_72820842_72820940_72821034_72821114_72821216_72821529
ENSMUSG00000002010.18_72822649_72825334_1	chrX	-	915	9	ISM	ENSMUSG00000002010.18	ENST00000217901.10	1170	11	5140	-27	5140	27	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGGACTCTCTTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	72825334	72822648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282
ENSMUSG00000002010.18_72823066_72825334_1	chrX	-	879	7	ISM	ENSMUSG00000002010.18	ENST00000370093.5	1161	9	5140	0	5140	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTTGTCCCCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	72825334	72823065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282
ENSMUSG00000002010.18_72823066_72830643_1	chrX	-	1241	10	NNC	ENSMUSG00000002010.18	novel	1243	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	7327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTTGTCCCCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	72830643	72823065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825739_72830382
ENSMUSG00000002010.18_72823066_72830643_2	chrX	-	1237	10	NNC	ENSMUSG00000002010.18	novel	1243	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTTGTCCCCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	72830643	72823065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824631_72824757_72824819_72825282_72825396_72825611_72825739_72830380
ENSMUSG00000002010.18_72823066_72830643_3	chrX	-	1236	10	NNC	ENSMUSG00000002010.18	novel	1243	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTTGTCCCCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	72830643	72823065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824307_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825739_72830380
ENSMUSG00000002010.18_72823066_72830643_4	chrX	-	1243	10	FSM	ENSMUSG00000002010.18	ENST00000370092.7	1243	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTTGTCCCCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	72830643	72823065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825739_72830380
ENSMUSG00000002010.18_72823642_72830396_1	chrX	-	788	9	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	78	-576	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCCCAGGCCTTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	72830396	72823641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chrX_-_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
ENSMUSG00000002010.18_72823680_72830503_1	chrX	-	857	9	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	0	-614	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAACATTGTCAACAACG	NA	NA	NA	NA	NA	NA	NA	NA	72830503	72823679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chrX_-_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
ENSMUSG00000002012.14_72699857_72703434_1	chrX	-	1279	12	FSM	ENSMUSG00000002012.14	ENSMUST00000002087.14	1536	12	0	257	0	-206	multi-exon	FALSE	canonical	NA	NA	NA	NA	2539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTACGGGGCTTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	72703434	72699856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703332
ENSMUSG00000002012.14_72700363_72700892_1	chrX	-	281	4	ISM	ENSMUSG00000002012.14	ENST00000370142.5	1464	11	1964	712	1964	-712	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTGAGGAGGCCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	72700892	72700362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_72700421_72700517_72700606_72700676_72700756_72700836
ENSMUSG00000002012.14_72700579_72701088_1	chrX	-	264	4	ISM	ENSMUSG00000002012.14	ENST00000370142.5	1464	11	1768	928	1768	-928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACATCCTGGGTTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	72701088	72700578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_72700606_72700676_72700756_72700836_72700950_72701043
ENSMUSG00000002014.13_72830634_72834432_1	chrX	+	793	6	NNC	ENSMUSG00000002014.13	novel	765	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	72830633	72834432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_72830913_72832443_72832560_72833405_72833481_72833636_72833727_72833970_72834031_72834259
ENSMUSG00000002014.13_72830634_72834432_2	chrX	+	796	6	NNC	ENSMUSG00000002014.13	novel	800	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	72830633	72834432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_72830913_72832440_72832554_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ENSMUSG00000002015.6_72729784_72756121_1	chrX	-	995	6	ISM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	3660	0	3660	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTGTGTCTAACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	72756121	72729783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050
ENSMUSG00000002015.6_72729918_72758465_1	chrX	-	958	7	ISM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	1316	134	1316	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTAGAAAAGCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	72758465	72729917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398
ENSMUSG00000002015.6_72730036_72759781_1	chrX	-	967	8	FSM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	0	252	0	-252	multi-exon	FALSE	canonical	NA	NA	NA	NA	5108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCATTATTTTGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	72759781	72730035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759723
ENSMUSG00000002015.6_72731442_72733259_1	chrX	-	330	3	ISM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	26522	1658	27	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTTTCCCTTTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	72733259	72731441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_72731544_72732265_72732387_72733152
ENSMUSG00000002015.6_72731442_72733259_2	chrX	-	326	3	NNC	ENSMUSG00000002015.6	novel	361	3	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTTTCCCTTTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	72733259	72731441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_72731536_72732265_72732387_72733148
ENSMUSG00000002017.11_75844505_75848241_1	chr17	-	1769	5	ISM	ENSMUSG00000002017.11	ENSMUST00000112507.4	2817	8	10700	424	10616	-415	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGCACTTAGTTAAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	75848241	75844504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190
ENSMUSG00000002017.11_75844711_75851841_1	chr17	-	1796	6	ISM	ENSMUSG00000002017.11	ENSMUST00000112507.4	2817	8	7100	630	7016	-621	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTCAGAGAGATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	75851841	75844710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742
ENSMUSG00000002017.11_75844993_75858791_1	chr17	-	1755	8	FSM	ENSMUSG00000002017.11	ENSMUST00000112507.4	2817	8	150	912	66	-903	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATCTCTTCTTTCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	75858791	75844992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
ENSMUSG00000002028.14_44718383_44720447_1	chr9	-	1179	2	ISM	ENSMUSG00000002028.14	ENST00000389506.10	13573	36	72147	843	72145	-843	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGGGGAATTGGACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	44720447	44718382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44719475_44720360
ENSMUSG00000002028.14_44718755_44722334_1	chr9	-	1174	5	ISM	ENSMUSG00000002028.14	ENSMUST00000114689.8	16470	36	70260	4103	70258	-1215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGACCTAGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	44722334	44718754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44719475_44720360_44720491_44721011_44721096_44721932_44722037_44722198
ENSMUSG00000002028.14_44721932_44730155_1	chr9	-	1252	7	ISM	ENSMUSG00000002028.14	ENSMUST00000114689.8	16470	36	62439	7280	62437	-4392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAATCCTACCCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	44730155	44721931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44722037_44722198_44722378_44724283_44724359_44725871_44726043_44727891_44727957_44729002_44729084_44729579
ENSMUSG00000002028.14_44722306_44730283_1	chr9	-	1168	6	ISM	ENSMUSG00000002028.14	ENST00000389506.10	13573	36	62311	4766	62309	-4766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCACTGTCGGAATTAC	NA	NA	NA	NA	NA	NA	NA	NA	44730283	44722305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44722378_44724283_44724359_44725871_44726043_44727891_44727957_44729002_44729084_44729579
ENSMUSG00000002028.14_44732893_44734589_1	chr9	-	1172	3	ISM	ENSMUSG00000002028.14	ENST00000389506.10	13573	36	58005	15353	58003	-15353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCATGTAATAATGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	44734589	44732892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44733817_44733983_44734167_44734524
ENSMUSG00000002028.14_44738119_44747219_1	chr9	-	1227	9	ISM	ENSMUSG00000002028.14	ENST00000534358.8	16468	36	45373	23467	45373	-20579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAATCACTGTGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	44747219	44738118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44738257_44740080_44740188_44740374_44740569_44741346_44741421_44741691_44741803_44742520_44742695_44744157_44744343_44745194_44745318_44747098
ENSMUSG00000002028.14_44740391_44747976_1	chr9	-	1191	9	ISM	ENSMUSG00000002028.14	ENST00000534358.8	16468	36	44616	25739	44616	-22851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCCCGATCTTGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	44747976	44740390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44740569_44741346_44741421_44741691_44741803_44742520_44742695_44744157_44744343_44745194_44745318_44747098_44747220_44747440_44747537_44747847
ENSMUSG00000002028.14_44756788_44759564_1	chr9	-	1175	3	ISM	ENSMUSG00000002028.14	ENST00000389506.10	13573	36	33030	39248	33028	-39248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGTCCTGGCTGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	44759564	44756787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44756921_44758149_44758328_44758700
ENSMUSG00000002028.14_44758209_44759770_1	chr9	-	1189	2	ISM	ENSMUSG00000002028.14	ENST00000389506.10	13573	36	32824	40669	32822	-40669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTGCCTTACCGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	44759770	44758208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44758328_44758700
ENSMUSG00000002058.14_78238088_78239990_1	chr11	+	980	4	ISM	ENSMUSG00000002058.14	ENSMUST00000100755.4	933	5	596	-185	596	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTGTCTATAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	78238087	78239990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78238158_78238622_78238726_78238912_78239086_78239356
ENSMUSG00000002059.19_78079256_78082286_1	chr11	+	850	9	ISM	ENSMUSG00000002059.19	ENSMUST00000002128.14	1368	11	0	728	0	723	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGCTCCAGCCTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	78079255	78082286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78079338_78080003_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190
ENSMUSG00000002059.19_78079256_78082508_1	chr11	+	953	10	ISM	ENSMUSG00000002059.19	ENSMUST00000002128.14	1368	11	0	506	0	-503	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTAACCACCTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	78079255	78082508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78079338_78080003_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400
ENSMUSG00000002059.19_78079748_78081563_1	chr11	+	689	4	FSM	ENSMUSG00000002059.19	ENST00000636513.1	689	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGAGGATGCCAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	78079747	78081563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_78080217_78081114_78081217_78081303_78081369_78081510
ENSMUSG00000002059.19_78080066_78082705_1	chr11	+	915	10	FSM	ENSMUSG00000002059.19	ENSMUST00000108322.9	1685	10	461	309	318	-306	multi-exon	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTGCTACCTGCAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	78080065	78082705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
ENSMUSG00000002059.19_78080066_78082713_1	chr11	+	918	10	NNC	ENSMUSG00000002059.19	novel	1685	10	NA	NA	318	-298	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGCAACTGCTCCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	78080065	78082713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082405_78082509_78082599
ENSMUSG00000002059.19_78080414_78082814_1	chr11	+	856	9	ISM	ENSMUSG00000002059.19	ENSMUST00000108322.9	1685	10	809	200	666	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCATGCTAGTCATTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	78080413	78082814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
ENSMUSG00000002059.19_78081179_78083014_1	chr11	+	846	7	NNC	ENSMUSG00000002059.19	novel	1685	10	NA	NA	1431	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCTTTCTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	78081178	78083014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082405_78082509_78082599
ENSMUSG00000002059.19_78081179_78083014_2	chr11	+	851	7	ISM	ENSMUSG00000002059.19	ENSMUST00000108322.9	1685	10	1574	0	1431	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCTTTCTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	78081178	78083014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
ENSMUSG00000002064.11_78136717_78145720_1	chr11	+	521	3	FSM	ENSMUSG00000002064.11	ENSMUST00000002133.9	1268	3	145	602	145	-602	multi-exon	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGGACAGTGCTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	78136716	78145720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_78136997_78141841_78142039_78145676
ENSMUSG00000002064.11_78136779_78145785_1	chr11	+	524	3	FSM	ENSMUSG00000002064.11	ENSMUST00000002133.9	1268	3	207	537	207	-537	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCACTGACGTACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	78136778	78145785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_78136997_78141841_78142039_78145676
ENSMUSG00000002064.11_78141839_78145975_1	chr11	+	499	2	ISM	ENSMUSG00000002064.11	ENSMUST00000002133.9	1268	3	5267	347	5267	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCCACTGTCGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	78141838	78145975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78142039_78145676
ENSMUSG00000002064.11_78141901_78145975_1	chr11	+	433	2	NNC	ENSMUSG00000002064.11	novel	1268	3	NA	NA	5329	-347	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCCACTGTCGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	78141900	78145975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_78142039_78145680
ENSMUSG00000002068.17_37797409_37798506_1	chr7	-	744	2	ISM	ENSMUSG00000002068.17	ENST00000357943.9	1168	5	1622	-1	1622	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTCTTAACTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	37798506	37797408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37798063_37798416
ENSMUSG00000002068.17_37797409_37802346_1	chr7	-	1438	7	ISM	ENSMUSG00000002068.17	ENST00000262643.8	1939	11	4556	-1	-2218	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTCTTAACTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	37802346	37797408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210
ENSMUSG00000002068.17_37797635_37798794_1	chr7	-	709	3	ISM	ENSMUSG00000002068.17	ENST00000357943.9	1168	5	1334	225	1334	-225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGCCACGCCATGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	37798794	37797634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37798063_37798416_37798575_37798671
ENSMUSG00000002068.17_37797635_37799311_1	chr7	-	796	4	ISM	ENSMUSG00000002068.17	ENST00000357943.9	1168	5	817	225	817	-225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGCCACGCCATGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	37799311	37797634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37798063_37798416_37798575_37798671_37798784_37799213
ENSMUSG00000002068.17_37797748_37798955_1	chr7	-	648	4	ISM	ENSMUSG00000002068.17	ENST00000262643.8	1939	11	7947	338	1173	-338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCAAGTACACCAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	37798955	37797747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892
ENSMUSG00000002068.17_37797774_37800035_1	chr7	-	711	5	FSM	ENSMUSG00000002068.17	ENST00000357943.9	1168	5	93	364	93	-364	multi-exon	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAATGCTAGGTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	37800035	37797773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37799213_37799310_37799979
ENSMUSG00000002068.17_37797817_37800055_1	chr7	-	685	5	NNC	ENSMUSG00000002068.17	novel	1168	5	NA	NA	73	-407	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGCAGGGGTCTGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	37800055	37797816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_37798063_37798416_37798575_37798671_37798777_37799209_37799310_37799979
ENSMUSG00000002068.17_37797836_37800076_1	chr7	-	690	5	FSM	ENSMUSG00000002068.17	ENST00000357943.9	1168	5	52	426	52	-426	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGTGCATCTCTTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	37800076	37797835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37799213_37799310_37799979
ENSMUSG00000002068.17_37797887_37800126_1	chr7	-	689	5	FSM	ENSMUSG00000002068.17	ENST00000357943.9	1168	5	2	477	2	-477	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGCTGCCTTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	37800126	37797886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37799213_37799310_37799979
ENSMUSG00000002068.17_37797904_37799309_1	chr7	-	660	5	ISM	ENSMUSG00000002068.17	ENST00000262643.8	1939	11	7593	494	819	-494	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGCTGCCTGGAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	37799309	37797903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213
ENSMUSG00000002068.17_37797936_37806927_1	chr7	-	1438	11	FSM	ENSMUSG00000002068.17	ENST00000262643.8	1939	11	-25	526	-25	-526	multi-exon	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCCATTGCCTCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	37806927	37797935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806149_37806746
ENSMUSG00000002068.17_37797975_37806927_1	chr7	-	1399	11	FSM	ENSMUSG00000002068.17	ENST00000262643.8	1939	11	-25	565	-25	-565	multi-exon	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAGCAGAGCAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	37806927	37797974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806149_37806746
ENSMUSG00000002068.17_37799212_37806087_1	chr7	-	666	6	ISM	ENSMUSG00000002068.17	ENST00000262643.8	1939	11	815	1802	815	-1802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTACACATTAATATCGT	NA	NA	NA	NA	NA	NA	NA	NA	37806087	37799211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020
ENSMUSG00000002083.14_16043541_16051839_1	chr7	+	1523	4	FSM	ENSMUSG00000002083.14	ENSMUST00000002152.13	1814	4	0	291	0	-291	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACGTGTGACCACTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	16043540	16051839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_16043787_16046050_16046340_16047551_16047743_16051042
ENSMUSG00000002083.14_16043668_16051899_1	chr7	+	1456	4	FSM	ENSMUSG00000002083.14	ENSMUST00000002152.13	1814	4	127	231	127	-231	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAGTCCCCAGGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	16043667	16051899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_16043787_16046050_16046340_16047551_16047743_16051042
ENSMUSG00000002083.14_16043704_16051966_1	chr7	+	1487	4	FSM	ENSMUSG00000002083.14	ENSMUST00000002152.13	1814	4	163	164	163	-164	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGAGGAGTCTGGGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	16043703	16051966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_16043787_16046050_16046340_16047551_16047743_16051042
ENSMUSG00000002083.14_16046109_16052130_1	chr7	+	1510	3	ISM	ENSMUSG00000002083.14	ENSMUST00000002152.13	1814	4	2568	0	2568	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTTTTGTTAGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	16046108	16052130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_16046340_16047551_16047743_16051042
ENSMUSG00000002083.14_16046188_16052130_1	chr7	+	1431	3	ISM	ENSMUSG00000002083.14	ENSMUST00000002152.13	1814	4	2647	0	2647	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTTTTGTTAGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	16046187	16052130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_16046340_16047551_16047743_16051042
ENSMUSG00000002102.16_90884440_90889472_1	chr2	+	1371	11	ISM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	86	305	-5	-305	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGTCAGCGTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	90884439	90889472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390
ENSMUSG00000002102.16_90884440_90889777_1	chr2	+	1550	12	FSM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	86	0	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTCTTTCTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	90884439	90889777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ENSMUSG00000002102.16_90884623_90889642_1	chr2	+	1232	12	FSM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	269	135	178	-135	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTACATGGAGGGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	90884622	90889642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ENSMUSG00000002102.16_90884623_90889777_1	chr2	+	1367	12	FSM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	269	0	178	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTCTTTCTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	90884622	90889777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ENSMUSG00000002102.16_90884623_90889777_2	chr2	+	1362	12	NNC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	178	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTCTTTCTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	90884622	90889777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888496_90889390_90889473_90889598
ENSMUSG00000002102.16_90884623_90889777_3	chr2	+	1358	12	NNC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	178	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	5305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTCTTTCTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	90884622	90889777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_90884677_90884919_90885004_90885332_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ENSMUSG00000002103.17_91033951_91041167_1	chr2	+	1046	8	FSM	ENSMUSG00000002103.17	ENST00000529444.7	1270	8	6	218	6	-218	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGGGTTAGCCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	91033950	91041167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_91034042_91034584_91034672_91036100_91036254_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ENSMUSG00000002103.17_91033989_91041253_1	chr2	+	1094	8	FSM	ENSMUSG00000002103.17	ENST00000529444.7	1270	8	44	132	44	-132	multi-exon	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGATGTTTACCGTG	NA	NA	NA	NA	NA	NA	NA	NA	91033988	91041253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_91034042_91034584_91034672_91036100_91036254_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ENSMUSG00000002103.17_91034020_91041340_1	chr2	+	1150	8	FSM	ENSMUSG00000002103.17	ENST00000529444.7	1270	8	75	45	75	-45	multi-exon	FALSE	canonical	NA	NA	NA	NA	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGACAAGCATTCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	91034019	91041340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_91034042_91034584_91034672_91036100_91036254_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ENSMUSG00000002103.17_91036099_91041398_1	chr2	+	1099	6	NNC	ENSMUSG00000002103.17	novel	1270	8	NA	NA	2154	13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCCATGAAAACCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	91036098	91041398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_91036254_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040953
ENSMUSG00000002103.17_91036099_91041398_2	chr2	+	1098	6	NNC	ENSMUSG00000002103.17	novel	1270	8	NA	NA	2154	13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCCATGAAAACCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	91036098	91041398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_91036254_91037061_91037195_91038164_91038245_91038384_91038492_91038605_91038782_91040951
ENSMUSG00000002103.17_91036099_91041398_3	chr2	+	1100	6	NNC	ENSMUSG00000002103.17	novel	1270	8	NA	NA	2154	13	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCCATGAAAACCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	91036098	91041398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_91036254_91037061_91037195_91038161_91038245_91038385_91038492_91038605_91038782_91040951
ENSMUSG00000002103.17_91036099_91041398_4	chr2	+	1099	6	NNC	ENSMUSG00000002103.17	novel	1270	8	NA	NA	2154	13	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCCATGAAAACCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	91036098	91041398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_91036254_91037061_91037195_91038161_91038245_91038384_91038492_91038607_91038782_91040951
ENSMUSG00000002104.12_90865986_90876074_1	chr2	+	1601	8	NNC	ENSMUSG00000002104.12	novel	1606	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2085	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	90865985	90876074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_90866334_90866891_90867231_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875189_90875385_90875790
ENSMUSG00000002104.12_90865986_90876074_2	chr2	+	1600	8	NNC	ENSMUSG00000002104.12	novel	1606	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	90865985	90876074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_90866334_90866891_90867225_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
ENSMUSG00000002104.12_90866123_90876074_1	chr2	+	1469	8	FSM	ENSMUSG00000002104.12	ENSMUST00000050323.6	1606	8	137	0	137	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	90866122	90876074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_90866334_90866891_90867231_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
ENSMUSG00000002104.12_90866123_90876074_2	chr2	+	1464	8	NNC	ENSMUSG00000002104.12	novel	1606	8	NA	NA	137	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	90866122	90876074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_90866334_90866891_90867231_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875189_90875385_90875790
ENSMUSG00000002104.12_90866123_90876074_3	chr2	+	1310	7	FSM	ENSMUSG00000002104.12	ENSMUST00000111446.10	1458	7	151	-3	137	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	90866122	90876074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_90866334_90866891_90867231_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
ENSMUSG00000002104.12_90866123_90876074_4	chr2	+	1463	8	NNC	ENSMUSG00000002104.12	novel	1606	8	NA	NA	137	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	90866122	90876074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_90866334_90866891_90867225_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
ENSMUSG00000002105.16_90892677_90893475_1	chr2	-	714	2	ISM	ENSMUSG00000002105.16	ENST00000362021.9	2196	9	5604	519	5604	-519	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCCAAGACCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	90893475	90892676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_90893324_90893408
ENSMUSG00000002105.16_90892789_90893760_1	chr2	-	731	3	ISM	ENSMUSG00000002105.16	ENSMUST00000111436.3	1291	10	6868	-430	5319	430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCTTCCTACTTACCCC	NA	NA	NA	NA	NA	NA	NA	NA	90893760	90892788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_90893324_90893408_90893509_90893664
ENSMUSG00000002105.16_90893108_90895962_1	chr2	-	728	7	ISM	ENSMUSG00000002105.16	ENSMUST00000111436.3	1291	10	4666	-111	3117	111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAGAGAGACCGACACTG	NA	NA	NA	NA	NA	NA	NA	NA	90895962	90893107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926
ENSMUSG00000002105.16_90893470_90898834_1	chr2	-	707	8	ISM	ENSMUSG00000002105.16	ENSMUST00000073575.12	2469	10	1928	1334	245	-251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTCTATATCGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	90898834	90893469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896046_90896357_90896472_90898775
ENSMUSG00000002105.16_90893750_90895310_1	chr2	-	249	4	ISM	ENSMUSG00000002105.16	ENST00000362021.9	2196	9	3769	1592	3769	-531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTAAGCTACAGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	90895310	90893749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_90893798_90894000_90894052_90895059_90895150_90895250
ENSMUSG00000002105.16_90893750_90898973_1	chr2	-	722	7	ISM	ENSMUSG00000002105.16	ENST00000362021.9	2196	9	106	1592	106	-531	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTAAGCTACAGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	90898973	90893749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896046_90896357_90896472_90898775
ENSMUSG00000002105.16_90895295_90900628_1	chr2	-	729	5	ISM	ENSMUSG00000002105.16	ENSMUST00000073575.12	2469	10	134	3159	0	703	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGCAGAGCCCGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	90900628	90895294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_90895353_90895926_90896046_90896357_90896472_90898775_90899085_90900499
ENSMUSG00000002105.16_90895324_90900693_1	chr2	-	765	5	ISM	ENSMUSG00000002105.16	ENSMUST00000073575.12	2469	10	69	3188	-65	674	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAATGGAGGCCACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	90900693	90895323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_90895353_90895926_90896046_90896357_90896472_90898775_90899085_90900499
ENSMUSG00000002105.16_90896053_90898968_1	chr2	-	612	2	FSM	ENSMUSG00000002105.16	ENST00000531974.5	778	2	111	55	111	-55	multi-exon	FALSE	canonical	NA	NA	NA	NA	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCAGGTGGTGAAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	90898968	90896052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_90896472_90898775
ENSMUSG00000002105.16_90896097_90899030_1	chr2	-	630	2	FSM	ENSMUSG00000002105.16	ENST00000531974.5	778	2	49	99	49	-99	multi-exon	FALSE	canonical	NA	NA	NA	NA	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCTTCTAGCCACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	90899030	90896096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_90896472_90898775
ENSMUSG00000002107.19_6549618_6726426_1	chr2	-	2389	13	FSM	ENSMUSG00000002107.19	ENSMUST00000100429.11	7491	13	0	5102	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGTTTGCTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	6726426	6549617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227
ENSMUSG00000002107.19_6550282_6565602_1	chr2	-	840	5	ISM	ENSMUSG00000002107.19	ENST00000631816.1	1803	14	324125	-3	160822	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGCATTCATGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	6565602	6550281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558794_6565481
ENSMUSG00000002107.19_6550446_6590920_1	chr2	-	811	6	ISM	ENSMUSG00000002107.19	ENST00000631816.1	1803	14	298807	161	135504	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGGCGTCTCAAAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	6590920	6550445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558794_6565481_6565602_6590784
ENSMUSG00000002107.19_6551952_6608895_1	chr2	-	795	7	ISM	ENSMUSG00000002107.19	ENSMUST00000142941.8	2338	12	117529	901	117529	-807	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACGCTTGAAGGTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	6608895	6551951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_6552025_6554642_6554787_6558595_6558794_6565481_6565602_6590784_6590920_6604844_6604909_6608834
ENSMUSG00000002107.19_6554742_6612718_1	chr2	-	747	7	ISM	ENSMUSG00000002107.19	ENSMUST00000142941.8	2338	12	113706	3691	113706	-3597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGACCAGGACATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	6612718	6554741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_6554787_6558595_6558794_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692
ENSMUSG00000002107.19_6558700_6620633_1	chr2	-	787	7	ISM	ENSMUSG00000002107.19	ENSMUST00000142941.8	2338	12	105791	7649	105791	-7555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGCCTACTCAGGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	6620633	6558699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_6558794_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498
ENSMUSG00000002107.19_6558700_6629530_1	chr2	-	836	8	ISM	ENSMUSG00000002107.19	ENSMUST00000142941.8	2338	12	96894	7649	96894	-7555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGCCTACTCAGGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	6629530	6558699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_6558794_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481
ENSMUSG00000002107.19_6590832_6726318_1	chr2	-	749	8	ISM	ENSMUSG00000002107.19	ENSMUST00000142941.8	2338	12	106	39781	106	-39687	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTGTCTAGCACAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	6726318	6590831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227
ENSMUSG00000002107.19_6608835_6889703_1	chr2	-	744	7	ISM	ENSMUSG00000002107.19	ENSMUST00000183091.8	2177	12	54	57690	24	-57690	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGCCCAAGAACGTGG	NA	NA	NA	NA	NA	NA	NA	NA	6889703	6608834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6889662
ENSMUSG00000002108.11_91014406_91025097_1	chr2	-	1750	10	FSM	ENSMUSG00000002108.11	ENST00000441012.7	1829	10	23	56	23	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCTCTACCACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	91025097	91014405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_91014828_91014999_91015095_91015286_91015401_91020529_91020630_91020806_91020987_91021083_91021293_91022133_91022401_91022904_91023088_91023961_91024042_91024997
ENSMUSG00000002108.11_91014406_91025097_2	chr2	-	1749	10	NNC	ENSMUSG00000002108.11	novel	1955	10	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCTCTACCACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	91025097	91014405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_91014828_91014999_91015095_91015286_91015401_91020529_91020630_91020806_91020987_91021083_91021293_91022133_91022401_91022904_91023088_91023961_91024037_91024993
ENSMUSG00000002109.15_91042859_91049156_1	chr2	-	590	5	ISM	ENSMUSG00000002109.15	ENST00000378603.7	976	7	18005	44	18005	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1539	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGGAAGCTCAGGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	91049156	91042858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088
ENSMUSG00000002109.15_91047061_91065297_1	chr2	-	655	5	ISM	ENSMUSG00000002109.15	ENST00000378603.7	976	7	1864	4246	1864	-4246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1723	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGATCTCCCACCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	91065297	91047060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91065159
ENSMUSG00000002109.15_91047118_91067056_1	chr2	-	619	6	ISM	ENSMUSG00000002109.15	ENST00000378603.7	976	7	105	4303	105	-4303	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1394	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACCAGAACAATGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	91067056	91047117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91065159_91065297_91067034
ENSMUSG00000002109.15_91047399_91067053_1	chr2	-	579	5	ISM	ENSMUSG00000002109.15	ENST00000378603.7	976	7	108	4584	108	-4584	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGACATCCCAAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	91067053	91047398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91047576_91047651_91047752_91049088_91049235_91065159_91065297_91067034
ENSMUSG00000002109.15_91047454_91067099_1	chr2	-	570	5	ISM	ENSMUSG00000002109.15	ENST00000378603.7	976	7	62	4639	62	-4639	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGGAAAGACAGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	91067099	91047453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91047576_91047651_91047752_91049088_91049235_91065159_91065297_91067034
ENSMUSG00000002129.12_4110467_4116583_1	chr11	+	294	3	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	117	15958	117	-15958	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTACTACCGCCACAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	4110466	4116583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4110551_4111045_4111168_4116495
ENSMUSG00000002129.12_4117794_4123186_1	chr11	+	279	3	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	7444	9355	7444	-9355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGGTGGTGGAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	4117793	4123186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4117891_4121061_4121137_4123079
ENSMUSG00000002129.12_4121093_4124115_1	chr11	+	279	3	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	10743	8426	10743	-8426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGTGGAGATGGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	4121092	4124115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4121137_4123079_4123231_4124031
ENSMUSG00000002129.12_4126312_4126689_1	chr11	+	289	2	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	15962	5852	15962	-5852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACCCCCCATTACATCAG	NA	NA	NA	NA	NA	NA	NA	NA	4126311	4126689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4126392_4126480
ENSMUSG00000002129.12_4126576_4127540_1	chr11	+	279	2	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	16226	5001	16226	-5001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATCAATGTGGTACCTA	NA	NA	NA	NA	NA	NA	NA	NA	4126575	4127540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4126727_4127412
ENSMUSG00000002129.12_4129229_4130255_1	chr11	+	308	3	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	18879	2286	18879	-2286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATCTTGTTTCAATTC	NA	NA	NA	NA	NA	NA	NA	NA	4129228	4130255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4129243_4129353_4129426_4130033
ENSMUSG00000002205.17_44397837_44409193_1	chr7	+	661	5	ISM	ENSMUSG00000002205.17	ENST00000599538.5	1490	13	-175	15766	0	-9857	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGACCCGGGTGACCACCT	NA	NA	NA	NA	NA	NA	NA	NA	44397836	44409193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44398076_44401538_44401601_44403239_44403380_44407169_44407320_44409123
ENSMUSG00000002205.17_44398008_44424992_1	chr7	+	1376	12	NNC	ENSMUSG00000002205.17	novel	1372	12	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGCCTGTGAGGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	44398007	44424992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_44398076_44401538_44401601_44403239_44403380_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416546_44416639_44417866_44418000_44418956_44419127_44424799
ENSMUSG00000002205.17_44398008_44424992_2	chr7	+	1371	12	NNC	ENSMUSG00000002205.17	novel	1372	12	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGCCTGTGAGGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	44398007	44424992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_44398076_44401538_44401601_44403239_44403380_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413628_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419127_44424799
ENSMUSG00000002205.17_44398008_44424992_3	chr7	+	1367	12	NNC	ENSMUSG00000002205.17	novel	1372	12	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGCCTGTGAGGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	44398007	44424992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_44398076_44401538_44401601_44403239_44403380_44409133_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419127_44424799
ENSMUSG00000002205.17_44398008_44424992_4	chr7	+	1377	12	FSM	ENSMUSG00000002205.17	ENST00000601341.5	1372	12	-4	-1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGCCTGTGAGGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	44398007	44424992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44398076_44401538_44401601_44403239_44403380_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419127_44424799
ENSMUSG00000002205.17_44398008_44424992_5	chr7	+	1372	12	NNC	ENSMUSG00000002205.17	novel	1372	12	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGCCTGTGAGGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	44398007	44424992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_44398076_44401538_44401601_44403239_44403380_44409123_44409319_44410306_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419127_44424799
ENSMUSG00000002205.17_44403238_44417999_1	chr7	+	1036	9	ISM	ENSMUSG00000002205.17	ENST00000316763.8	1366	11	0	6960	0	-1051	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGCGGCTCCACCACG	NA	NA	NA	NA	NA	NA	NA	NA	44403237	44417999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866
ENSMUSG00000002205.17_44403350_44419001_1	chr7	+	969	10	ISM	ENSMUSG00000002205.17	ENST00000316763.8	1366	11	112	5958	112	-49	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGGCTTTATGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	44403349	44419001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956
ENSMUSG00000002205.17_44407201_44419052_1	chr7	+	959	9	ISM	ENSMUSG00000002205.17	ENST00000316763.8	1366	11	3963	5907	3963	2	internal_fragment	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGATAACTAGGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	44407200	44419052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956
ENSMUSG00000002205.17_44413564_44424846_1	chr7	+	629	7	ISM	ENSMUSG00000002205.17	ENSMUST00000002275.15	1969	15	15727	2093	10326	-113	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCCACCCTATGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	44413563	44424846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799
ENSMUSG00000002205.17_44414293_44424959_1	chr7	+	586	6	ISM	ENSMUSG00000002205.17	ENSMUST00000002275.15	1969	15	16456	1980	11055	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGAGGTTGTTCACTTA	NA	NA	NA	NA	NA	NA	NA	NA	44414292	44424959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799
ENSMUSG00000002205.17_44416590_44426716_1	chr7	+	593	6	ISM	ENSMUSG00000002205.17	ENSMUST00000002275.15	1969	15	18753	223	13352	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAATCCCTTGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	44416589	44426716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
ENSMUSG00000002228.8_104689264_104690467_1	chr3	+	381	3	ISM	ENSMUSG00000002228.8	ENST00000464951.1	2336	11	851	2867	851	-2867	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGATGGGCACGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	104689263	104690467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_104689499_104689916_104690038_104690442
ENSMUSG00000002228.8_104689422_104691026_1	chr3	+	426	5	ISM	ENSMUSG00000002228.8	ENST00000464951.1	2336	11	1009	2308	1009	-2308	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGGTGCTGTACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	104689421	104691026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_104689499_104689916_104690038_104690442_104690554_104690670_104690731_104690969
ENSMUSG00000002228.8_104690671_104692335_1	chr3	+	441	5	ISM	ENSMUSG00000002228.8	ENST00000464951.1	2336	11	2258	999	2258	-999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAACCCTGAGGTAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	104690670	104692335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271
ENSMUSG00000002228.8_104691401_104692764_1	chr3	+	385	5	ISM	ENSMUSG00000002228.8	ENST00000464951.1	2336	11	2988	570	2988	-570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGGGAACAGATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	104691400	104692764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713
ENSMUSG00000002228.8_104691950_104692865_1	chr3	+	443	4	ISM	ENSMUSG00000002228.8	ENST00000464951.1	2336	11	3537	469	3537	-469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGGGTTGCCTGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	104691949	104692865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_104692069_104692271_104692336_104692501_104692610_104692713
ENSMUSG00000002228.8_104692031_104693065_1	chr3	+	410	5	ISM	ENSMUSG00000002228.8	ENST00000464951.1	2336	11	3618	269	3618	-269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGACCGTGGCTGGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	104692030	104693065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_104692069_104692271_104692336_104692501_104692610_104692713_104692866_104693017
ENSMUSG00000002228.8_104692572_104693234_1	chr3	+	407	3	ISM	ENSMUSG00000002228.8	ENST00000464951.1	2336	11	4159	100	4159	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGAAGTTGTGTCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	104692571	104693234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_104692610_104692713_104692866_104693017
ENSMUSG00000002233.14_104696350_104701775_1	chr3	+	1050	5	NNC	ENSMUSG00000002233.14	novel	1202	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2089	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	104696349	104701775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_104696400_104699204_104699369_104699886_104700002_104700215_104700347_104701185
ENSMUSG00000002233.14_104696350_104701775_2	chr3	+	1050	5	NNC	ENSMUSG00000002233.14	novel	1202	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	104696349	104701775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_104696400_104699210_104699369_104699880_104700002_104700215_104700347_104701185
ENSMUSG00000002233.14_104696350_104701775_3	chr3	+	1056	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	146	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	104696349	104701775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
ENSMUSG00000002279.20_25798173_25881800_1	chr17	+	1823	10	NNC	ENSMUSG00000002279.20	novel	1861	11	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCCTCCTGTCTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	25798172	25881800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_25798354_25804516_25804831_25831269_25831419_25850708_25850775_25864128_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ENSMUSG00000002279.20_25798173_25881800_2	chr17	+	1829	10	NIC	ENSMUSG00000002279.20	novel	1861	11	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCCTCCTGTCTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	25798172	25881800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_+_25798354_25804516_25804831_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ENSMUSG00000002280.12_25992750_25999934_1	chr17	+	950	8	ISM	ENSMUSG00000002280.12	ENST00000251588.7	1443	11	-34	1295	0	-1295	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGGGGACTGAGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	25992749	25999934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853
ENSMUSG00000002280.12_25994018_26000352_1	chr17	+	970	8	ISM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	1268	1954	1234	-877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGCAGGGCAGGCACTAA	NA	NA	NA	NA	NA	NA	NA	NA	25994017	26000352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214
ENSMUSG00000002280.12_25994062_26000269_1	chr17	+	842	8	ISM	ENSMUSG00000002280.12	ENST00000251588.7	1443	11	1278	960	1278	-960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTACCTGGAGCATGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	25994061	26000269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999935_26000223
ENSMUSG00000002280.12_25995936_26000353_1	chr17	+	876	7	ISM	ENSMUSG00000002280.12	ENST00000251588.7	1443	11	3152	876	3152	-876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCAGGGCAGGCACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	25995935	26000353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999935_26000223
ENSMUSG00000002280.12_25996007_26000752_1	chr17	+	896	8	ISM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	3257	1554	3223	-477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGTGCAGAAGTTGAAACG	NA	NA	NA	NA	NA	NA	NA	NA	25996006	26000752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661
ENSMUSG00000002280.12_25996048_26000695_1	chr17	+	797	8	ISM	ENSMUSG00000002280.12	ENST00000251588.7	1443	11	3264	534	3264	-534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCCAGGTACTGTTGCG	NA	NA	NA	NA	NA	NA	NA	NA	25996047	26000695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999935_26000223_26000353_26000661
ENSMUSG00000002280.12_25996317_26001563_1	chr17	+	1490	8	ISM	ENSMUSG00000002280.12	ENSMUST00000134108.8	2062	11	3567	202	3533	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGAGTGTGAGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	25996316	26001563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000166_26000353_26000661_26000820_26000989
ENSMUSG00000002280.12_25996320_26001007_1	chr17	+	883	8	ISM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	3570	1299	3536	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCTCAAGGCTCCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	25996319	26001007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
ENSMUSG00000002280.12_25996341_26000746_1	chr17	+	770	7	ISM	ENSMUSG00000002280.12	ENST00000251588.7	1443	11	3557	483	3557	-483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACCTCGTGCAGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	25996340	26000746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999935_26000223_26000353_26000661
ENSMUSG00000002280.12_25996372_26001063_1	chr17	+	887	8	ISM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	3622	1243	3588	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTACAGCATGGTGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	25996371	26001063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
ENSMUSG00000002280.12_25996415_26001131_1	chr17	+	912	8	ISM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	3665	1175	3631	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCAAGGAGAGGACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	25996414	26001131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
ENSMUSG00000002280.12_25997960_26001062_1	chr17	+	789	7	ISM	ENSMUSG00000002280.12	ENST00000251588.7	1443	11	5176	167	5176	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTACAGCATGGTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	25997959	26001062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25998059_25998471_25998591_25999280_25999411_25999853_25999935_26000223_26000353_26000661_26000820_26000989
ENSMUSG00000002280.12_25998023_26001211_1	chr17	+	875	7	ISM	ENSMUSG00000002280.12	ENST00000251588.7	1443	11	5239	18	5239	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATCAGGTGGTAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	25998022	26001211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25998059_25998471_25998591_25999280_25999411_25999853_25999935_26000223_26000353_26000661_26000820_26000989
ENSMUSG00000002280.12_25999279_26001230_1	chr17	+	741	5	ISM	ENSMUSG00000002280.12	ENST00000251588.7	1443	11	6495	-1	6495	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTGAGTCTGTGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	25999278	26001230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25999411_25999853_25999935_26000223_26000353_26000661_26000820_26000989
ENSMUSG00000002280.12_25999279_26001230_2	chr17	+	738	5	NNC	ENSMUSG00000002280.12	novel	1443	11	NA	NA	6495	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTGAGTCTGTGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	25999278	26001230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_25999411_25999856_25999935_26000223_26000353_26000661_26000820_26000989
ENSMUSG00000002280.12_25999279_26001230_3	chr17	+	736	5	NNC	ENSMUSG00000002280.12	novel	2062	11	NA	NA	6495	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTGAGTCTGTGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	25999278	26001230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_25999411_25999853_25999927_26000220_26000353_26000661_26000820_26000989
ENSMUSG00000002280.12_25999312_26001406_1	chr17	+	885	5	ISM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	6562	900	6528	177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGCGTGACCCATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	25999311	26001406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
ENSMUSG00000002280.12_25999782_26001535_1	chr17	+	987	4	ISM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	7032	771	6998	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGAGCCCTGCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	25999781	26001535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25999927_26000214_26000353_26000661_26000820_26000989
ENSMUSG00000002280.12_26000295_26001767_1	chr17	+	994	3	ISM	ENSMUSG00000002280.12	ENSMUST00000134108.8	2062	11	7545	-2	7511	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCACTGTGTGTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	26000294	26001767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26000353_26000661_26000820_26000989
ENSMUSG00000002289.17_33993107_33996100_1	chr17	-	1613	2	ISM	ENSMUSG00000002289.17	ENSMUST00000002360.17	3308	7	4704	383	4704	-383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGATCCTGTATCACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	33996100	33993106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_33994543_33995923
ENSMUSG00000002289.17_33993265_33996362_1	chr17	-	1629	3	ISM	ENSMUSG00000002289.17	ENSMUST00000002360.17	3308	7	4442	541	4442	-541	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATATAACTCATGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	33996362	33993264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_33994543_33995923_33996206_33996293
ENSMUSG00000002289.17_33993465_33999599_1	chr17	-	1666	5	ISM	ENSMUSG00000002289.17	ENSMUST00000002360.17	3308	7	1205	741	1205	-741	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTTAGGGAAATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	33999599	33993464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_33994543_33995923_33996206_33996293_33996390_33997345_33997460_33999503
ENSMUSG00000002289.17_33993599_33999835_1	chr17	-	1629	6	NNC	ENSMUSG00000002289.17	novel	3308	7	NA	NA	969	-875	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCTAACAATAGCCTATA	NA	NA	NA	NA	NA	NA	NA	NA	33999835	33993598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33994543_33995923_33996206_33996293_33996390_33997345_33997460_33999503_33999618_33999756
ENSMUSG00000002289.17_33993706_34000110_1	chr17	-	1628	7	NNC	ENSMUSG00000002289.17	novel	3308	7	NA	NA	694	-982	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGTTTATATTTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34000110	33993705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33994543_33995923_33996206_33996293_33996390_33997345_33997460_33999503_33999618_33999756_33999868_34000036
ENSMUSG00000002289.17_33993989_34000409_1	chr17	-	1644	7	NNC	ENSMUSG00000002289.17	novel	3308	7	NA	NA	395	-1265	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGCCCTGGATACACTC	NA	NA	NA	NA	NA	NA	NA	NA	34000409	33993988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33994543_33995923_33996206_33996293_33996390_33997345_33997460_33999503_33999618_33999756_33999868_34000036
ENSMUSG00000002289.17_33994313_34000804_1	chr17	-	1715	7	NNC	ENSMUSG00000002289.17	novel	3308	7	NA	NA	0	-1589	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCCTGAGATTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	34000804	33994312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33994543_33995923_33996206_33996293_33996390_33997345_33997460_33999503_33999618_33999756_33999868_34000036
ENSMUSG00000002297.17_8447011_8453740_1	chr5	-	1518	4	ISM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	18976	0	18842	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCTGAGAATAAAAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	8453740	8447010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611
ENSMUSG00000002297.17_8447154_8455838_1	chr5	-	1458	6	ISM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	16878	143	16744	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGGTGGGGGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	8455838	8447153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801
ENSMUSG00000002297.17_8447463_8462195_1	chr5	-	1422	10	ISM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	10521	452	10387	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATTGGATAAAAAGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	8462195	8447462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120
ENSMUSG00000002297.17_8447532_8462264_1	chr5	-	1422	10	ISM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	10452	521	10318	-378	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGTAAAATCCAGCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	8462264	8447531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120
ENSMUSG00000002297.17_8447608_8462290_1	chr5	-	1372	10	ISM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	10426	597	10292	-454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGGCGAGAACTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	8462290	8447607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120
ENSMUSG00000002297.17_8447714_8471354_1	chr5	-	1410	11	ISM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	1362	703	1228	-560	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTACACAGCTTTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	8471354	8447713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220
ENSMUSG00000002297.17_8447852_8472582_1	chr5	-	1427	12	FSM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	134	841	0	-698	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCGGAACACCAAGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	8472582	8447851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ENSMUSG00000002307.17_34128472_34132428_1	chr17	+	1788	6	ISM	ENSMUSG00000002307.17	ENSMUST00000079421.15	2581	8	53	2136	53	-2128	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCCTCGAGCCGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	34128471	34132428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246
ENSMUSG00000002307.17_34129451_34132534_1	chr17	+	1747	5	ISM	ENSMUSG00000002307.17	ENSMUST00000170075.9	2673	8	876	2022	876	-2022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCGGAAGATTCCCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	34129450	34132534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246
ENSMUSG00000002307.17_34129510_34132591_1	chr17	+	1745	5	ISM	ENSMUSG00000002307.17	ENSMUST00000170075.9	2673	8	935	1965	935	-1965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTCAATGGGCGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	34129509	34132591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246
ENSMUSG00000002307.17_34130210_34132884_1	chr17	+	1788	5	ISM	ENSMUSG00000002307.17	ENSMUST00000170075.9	2673	8	1635	1672	1635	-1672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTTGGCCTCTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	34130209	34132884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816
ENSMUSG00000002307.17_34130531_34134492_1	chr17	+	1795	6	ISM	ENSMUSG00000002307.17	ENSMUST00000170075.9	2673	8	1956	64	1956	-64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATCAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	34130530	34134492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ENSMUSG00000002307.17_34130655_34134556_1	chr17	+	1735	6	ISM	ENSMUSG00000002307.17	ENSMUST00000170075.9	2673	8	2080	0	2080	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTATTCTTTCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	34130654	34134556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ENSMUSG00000002308.17_34062127_34066667_1	chr17	+	464	3	ISM	ENSMUSG00000002308.17	ENSMUST00000002379.15	2209	5	62	2081	62	-1058	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTGACTCCAGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	34062126	34066667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34062266_34064989_34065116_34066468
ENSMUSG00000002308.17_34066521_34067344_1	chr17	+	426	3	ISM	ENSMUSG00000002308.17	ENSMUST00000087559.8	1191	5	4121	381	4121	-381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGGCTGTGAAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	34066520	34067344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34066700_34066990_34067153_34067259
ENSMUSG00000002308.17_34066996_34067540_1	chr17	+	438	2	ISM	ENSMUSG00000002308.17	ENSMUST00000087559.8	1191	5	4596	185	4596	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATATGGTCCTAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	34066995	34067540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34067153_34067259
ENSMUSG00000002308.17_34067063_34067596_1	chr17	+	427	2	ISM	ENSMUSG00000002308.17	ENSMUST00000087559.8	1191	5	4663	129	4663	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTGGAAACTTGCCATA	NA	NA	NA	NA	NA	NA	NA	NA	34067062	34067596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34067153_34067259
ENSMUSG00000002320.16_55873891_55878658_1	chr14	-	874	4	ISM	ENSMUSG00000002320.16	ENSMUST00000002391.15	2382	5	2139	374	2050	-374	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCGTCGGCTCCACC	NA	NA	NA	NA	NA	NA	NA	NA	55878658	55873890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423
ENSMUSG00000002320.16_55877901_55880708_1	chr14	-	1183	4	ISM	ENSMUSG00000002320.16	ENSMUST00000120041.8	2164	6	0	4479	0	-4384	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATTGGAGGCGAGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	55880708	55877900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55878028_55878423_55879046_55880050_55880413_55880636
ENSMUSG00000002320.16_55878670_55880980_1	chr14	-	880	3	ISM	ENSMUSG00000002320.16	ENSMUST00000122358.8	2517	6	283	5248	-169	-5153	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCATGGTGCTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	55880980	55878669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55879046_55880050_55880413_55880838
ENSMUSG00000002325.16_55842508_55845199_1	chr14	+	877	5	ISM	ENSMUSG00000002325.16	ENST00000396864.8	1151	7	1	1222	1	-1222	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCCATCCCCATCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	55842507	55845199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55842690_55843177_55843362_55843549_55843691_55843774_55843896_55844950
ENSMUSG00000002325.16_55842626_55846190_1	chr14	+	921	6	ISM	ENSMUSG00000002325.16	ENST00000396864.8	1151	7	119	231	119	-231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTACATTTCTGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	55842625	55846190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55842690_55843177_55843362_55843549_55843691_55843774_55843896_55844950_55845313_55846141
ENSMUSG00000002325.16_55843176_55846422_1	chr14	+	971	6	ISM	ENSMUSG00000002325.16	ENST00000396864.8	1151	7	669	-1	669	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	852	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGAAAGCTGCCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	55843175	55846422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55843362_55843549_55843691_55843774_55843896_55844950_55845313_55846141_55846258_55846377
ENSMUSG00000002325.16_55843277_55846422_1	chr14	+	870	6	ISM	ENSMUSG00000002325.16	ENST00000396864.8	1151	7	770	-1	770	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGAAAGCTGCCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	55843276	55846422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55843362_55843549_55843691_55843774_55843896_55844950_55845313_55846141_55846258_55846377
ENSMUSG00000002326.7_55909692_55916659_1	chr14	+	1979	9	NNC	ENSMUSG00000002326.7	novel	1993	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTCTGGACTTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	55909691	55916659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914519_55915327_55915488_55915680
ENSMUSG00000002326.7_55909837_55916659_1	chr14	+	1850	10	FSM	ENSMUSG00000002326.7	ENSMUST00000002397.7	1993	10	145	-2	145	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTCTGGACTTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	55909836	55916659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
ENSMUSG00000002326.7_55910163_55915857_1	chr14	+	938	9	NNC	ENSMUSG00000002326.7	novel	936	9	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTCCCAGTAGACCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	55910162	55915857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_55910259_55910406_55910527_55912783_55912868_55913015_55913091_55914211_55914288_55914384_55914492_55914662_55914706_55915327_55915488_55915680
ENSMUSG00000002326.7_55910163_55915857_2	chr14	+	938	9	NNC	ENSMUSG00000002326.7	novel	936	9	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTCCCAGTAGACCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	55910162	55915857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_55910259_55910406_55910527_55912783_55912868_55913015_55913091_55914211_55914294_55914384_55914492_55914662_55914706_55915333_55915488_55915680
ENSMUSG00000002326.7_55910163_55915857_4	chr14	+	944	9	FSM	ENSMUSG00000002326.7	ENST00000559910.5	936	9	-8	0	-8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTCCCAGTAGACCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	55910162	55915857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_55910259_55910406_55910527_55912783_55912868_55913015_55913091_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
ENSMUSG00000002326.7_55910479_55915345_1	chr14	+	472	6	ISM	ENSMUSG00000002326.7	ENST00000456667.7	951	8	308	512	308	-512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTGGGTGGCATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	55910478	55915345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55910527_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327
ENSMUSG00000002329.8_55896162_55897464_1	chr14	-	584	4	ISM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	501	826	501	-826	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAGGCAGTGCTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	55897464	55896161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444
ENSMUSG00000002329.8_55896193_55897535_1	chr14	-	624	4	ISM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	430	857	430	-857	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTGGGAATTGACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	55897535	55896192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444
ENSMUSG00000002329.8_55896366_55897887_1	chr14	-	625	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	78	1030	78	-1030	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTGTCCACGTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	55897887	55896365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
ENSMUSG00000002329.8_55896421_55897897_1	chr14	-	580	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	68	1085	68	-1085	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATCTGCAGTGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55897897	55896420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
ENSMUSG00000002329.8_55896471_55897965_1	chr14	-	598	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	0	1135	0	-1135	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTGCAAAGGCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	55897965	55896470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
ENSMUSG00000002332.17_55976477_55977462_1	chr14	-	552	3	ISM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	5685	0	5685	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTTCTCATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	55977462	55976476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55976878_55977008_55977090_55977392
ENSMUSG00000002332.17_55976691_55978669_1	chr14	-	515	5	ISM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	4478	214	4478	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGGGTGGGGCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	55978669	55976690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639
ENSMUSG00000002332.17_55976803_55978719_1	chr14	-	453	5	ISM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	4428	326	4428	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCCTGGCTTCCTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	55978719	55976802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639
ENSMUSG00000002332.17_55976849_55978772_1	chr14	-	460	5	ISM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	4375	372	4375	-372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTATGCCCTCTCACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	55978772	55976848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639
ENSMUSG00000002332.17_55977008_55980990_1	chr14	-	512	5	ISM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	2157	531	2157	-531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTTTGCCCTGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	55980990	55977007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55977090_55977392_55977463_55978183_55978331_55978639_55978773_55980910
ENSMUSG00000002332.17_55977078_55981134_1	chr14	-	462	6	ISM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	2013	601	2013	-601	internal_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTGAGCGGGAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	55981134	55977077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55977090_55977392_55977463_55978183_55978331_55978639_55978773_55980910_55980991_55981114
ENSMUSG00000002332.17_55977420_55981172_1	chr14	-	461	5	ISM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	1975	943	1975	-943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGTGTGTGGTGGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	55981172	55977419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55977463_55978183_55978331_55978639_55978773_55980910_55980991_55981114
ENSMUSG00000002332.17_55978274_55982425_1	chr14	-	465	5	ISM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	722	1797	722	-1797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCTGTGGCCAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	55982425	55978273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55978331_55978639_55978773_55980910_55980991_55981114_55981259_55982374
ENSMUSG00000002332.17_55978312_55982517_1	chr14	-	519	5	ISM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	630	1835	630	-1835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGCCCATGAGCTACGG	NA	NA	NA	NA	NA	NA	NA	NA	55982517	55978311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55978331_55978639_55978773_55980910_55980991_55981114_55981259_55982374
ENSMUSG00000002332.17_55978640_55982545_1	chr14	-	528	4	ISM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	602	2163	602	-2163	internal_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGATCAAGGCACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	55982545	55978639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55978773_55980910_55980991_55981114_55981259_55982374
ENSMUSG00000002332.17_55978744_55982919_1	chr14	-	446	5	ISM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	228	2267	228	-2267	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGCTGATGGTGCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	55982919	55978743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55978773_55980910_55980991_55981114_55981259_55982374_55982546_55982897
ENSMUSG00000002342.18_70626953_70633862_1	chr8	+	900	9	ISM	ENSMUSG00000002342.18	ENST00000587583.6	1367	11	1	928	1	-928	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAGTAACCCGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	70626952	70633862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70627057_70629494_70629576_70629890_70629989_70630176_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798
ENSMUSG00000002342.18_70626953_70633973_1	chr8	+	1011	9	ISM	ENSMUSG00000002342.18	ENST00000587583.6	1367	11	1	817	1	-817	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCACCCTGGGTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	70626952	70633973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70627057_70629494_70629576_70629890_70629989_70630176_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798
ENSMUSG00000002342.18_70626953_70634682_1	chr8	+	1024	9	FSM	ENSMUSG00000002342.18	ENST00000450333.6	1133	9	1	108	1	-108	multi-exon	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTCAGAGGCATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	70626952	70634682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_70627057_70629494_70629576_70629890_70629989_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUSG00000002342.18_70626953_70634791_1	chr8	+	1133	9	FSM	ENSMUSG00000002342.18	ENST00000450333.6	1133	9	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCACTAGGCTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	70626952	70634791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_70627057_70629494_70629576_70629890_70629989_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUSG00000002342.18_70626953_70635595_1	chr8	+	2246	11	ISM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	1898	736	1	95	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACTTAGGAGTGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	70626952	70635595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUSG00000002342.18_70626953_70635662_1	chr8	+	2313	11	ISM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	1898	669	1	162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACAATAGGTCCATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	70626952	70635662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUSG00000002342.18_70626953_70635730_1	chr8	+	2381	11	ISM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	1898	601	1	230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGAGACAGGGTCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	70626952	70635730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUSG00000002342.18_70629495_70633973_1	chr8	+	907	8	ISM	ENSMUSG00000002342.18	ENST00000587583.6	1367	11	2543	817	2543	-817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCACCCTGGGTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	70629494	70633973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70629576_70629890_70629989_70630176_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798
ENSMUSG00000002342.18_70629495_70634176_1	chr8	+	1004	9	ISM	ENSMUSG00000002342.18	ENST00000587583.6	1367	11	2543	614	2543	-614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGGCTGGTGGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	70629494	70634176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70629576_70629890_70629989_70630176_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079
ENSMUSG00000002342.18_70629495_70634791_1	chr8	+	1029	8	ISM	ENSMUSG00000002342.18	ENST00000450333.6	1133	9	2543	-1	2543	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCACTAGGCTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	70629494	70634791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70629576_70629890_70629989_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUSG00000002342.18_70629495_70635502_1	chr8	+	2043	10	NNC	ENSMUSG00000002342.18	novel	2080	11	NA	NA	2543	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTACCATGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	70629494	70635502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633194_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUSG00000002342.18_70629890_70634578_1	chr8	+	970	9	ISM	ENSMUSG00000002342.18	ENST00000587583.6	1367	11	2938	212	2938	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCCCTCAGAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	70629889	70634578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70629989_70630176_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUSG00000002342.18_70633356_70636331_1	chr8	+	2329	5	ISM	ENSMUSG00000002342.18	ENST00000450333.6	1133	9	6404	-1541	6404	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGATCCTTATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	70633355	70636331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUSG00000002345.19_70592357_70598540_1	chr8	+	435	5	ISM	ENSMUSG00000002345.19	ENSMUST00000002418.15	810	6	208	1366	208	-1366	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTAGAGGCCGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	70592356	70598540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460
ENSMUSG00000002345.19_70597671_70599911_1	chr8	+	366	3	ISM	ENSMUSG00000002345.19	ENSMUST00000110139.2	679	6	4744	58	4744	5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCTCTTTCCATGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	70597670	70599911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70597785_70598460_70598541_70599739
ENSMUSG00000002365.11_5891604_5981015_1	chr17	+	2095	18	FSM	ENSMUSG00000002365.11	ENST00000681186.1	2472	18	-7	384	0	-384	multi-exon	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGACAAACCCTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	5891603	5981015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978501_5978572_5980844
ENSMUSG00000002365.11_5937270_5981129_1	chr17	+	1993	17	ISM	ENSMUSG00000002365.11	ENST00000681186.1	2472	18	45659	270	45659	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTTAAATTTATCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	5937269	5981129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978501_5978572_5980844
ENSMUSG00000002365.11_5942049_5981399_1	chr17	+	2099	15	ISM	ENSMUSG00000002365.11	ENST00000681186.1	2472	18	50438	0	50438	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGGGATAGGGAAATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	5942048	5981399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978501_5978572_5980844
ENSMUSG00000002365.11_5952637_5981015_1	chr17	+	1444	13	ISM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	61033	1214	61026	-384	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGACAAACCCTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	5952636	5981015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ENSMUSG00000002365.11_5955159_5981129_1	chr17	+	1410	12	ISM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	63555	1100	63548	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTTAAATTTATCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	5955158	5981129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ENSMUSG00000002365.11_5958880_5981336_1	chr17	+	1378	10	ISM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	67276	893	67269	-63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGATCGTTGTCTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	5958879	5981336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ENSMUSG00000002365.11_5970371_5981555_1	chr17	+	1346	8	ISM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	78767	674	78760	156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGCACTCCCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	5970370	5981555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ENSMUSG00000002365.11_5970925_5981708_1	chr17	+	1340	7	ISM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	79321	521	79314	309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCCCTCCCACAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	5970924	5981708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ENSMUSG00000002365.11_5976418_5981957_1	chr17	+	1339	4	ISM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	84814	272	84807	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCAACAGAAATGAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	5976417	5981957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5976437_5977480_5977596_5978479_5978572_5980844
ENSMUSG00000002365.11_5977561_5982074_1	chr17	+	1357	3	ISM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	85957	155	85950	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACCTGACTTTTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	5977560	5982074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5977596_5978479_5978572_5980844
ENSMUSG00000002372.10_56980384_57018582_1	chr17	+	2165	16	FSM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	26	182	19	-182	multi-exon	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTCTGGCCAGGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	56980383	57018582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ENSMUSG00000002372.10_56993006_57018082_1	chr17	+	1838	16	ISM	ENSMUSG00000002372.10	ENSMUST00000233319.2	2567	17	12641	682	12641	-682	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGAACGTTCCCCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	56993005	57018082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ENSMUSG00000002372.10_56999625_57018196_1	chr17	+	1792	15	ISM	ENSMUSG00000002372.10	ENSMUST00000233319.2	2567	17	19260	568	19260	-568	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTGAGTAACTTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	56999624	57018196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ENSMUSG00000002372.10_56999688_57018264_1	chr17	+	1797	15	ISM	ENSMUSG00000002372.10	ENSMUST00000233319.2	2567	17	19323	500	19323	-500	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTCTGGTGGCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	56999687	57018264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ENSMUSG00000002372.10_57003601_57018764_1	chr17	+	2259	14	NNC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	23236	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	57003600	57018764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_57003639_57003717_57003790_57008027_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ENSMUSG00000002372.10_57003735_57018764_1	chr17	+	2209	13	ISM	ENSMUSG00000002372.10	ENSMUST00000233319.2	2567	17	23370	0	23370	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	57003734	57018764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ENSMUSG00000002372.10_57008446_57018764_2	chr17	+	2086	11	NNC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	28081	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	57008445	57018764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017595_57017778_57017855
ENSMUSG00000002379.8_57024767_57029137_1	chr17	+	538	4	NNC	ENSMUSG00000002379.8	novel	545	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATGTCTTAAAGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	57024766	57029137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_57024943_57028034_57028128_57028318_57028442_57028991
ENSMUSG00000002393.15_71826767_71828434_1	chr8	-	674	2	ISM	ENSMUSG00000002393.15	ENSMUST00000002466.9	2218	4	6170	-4	6170	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCAGCCTCTGCTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	71828434	71826766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71827399_71828392
ENSMUSG00000002393.15_71831062_71834304_1	chr8	-	736	2	ISM	ENSMUSG00000002393.15	ENSMUST00000002466.9	2218	4	300	4291	300	-4291	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCCGGGTGGGCATGC	NA	NA	NA	NA	NA	NA	NA	NA	71834304	71831061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71831128_71833634
ENSMUSG00000002395.15_71819586_71822376_2	chr8	+	960	8	NIC	ENSMUSG00000002395.15	novel	973	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTCTTCAGTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	71819585	71822376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821493_71821522_71821775_71821948_71822170
ENSMUSG00000002395.15_71819586_71822376_3	chr8	+	957	7	NNC	ENSMUSG00000002395.15	novel	973	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTCTTCAGTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	71819585	71822376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821750_71821948_71822170
ENSMUSG00000002396.9_71824160_71826597_1	chr8	+	1532	3	FSM	ENSMUSG00000002396.9	ENSMUST00000110051.2	2179	3	218	429	170	264	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCTTGATCCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	71824159	71826597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_71824630_71825392_71825447_71825589
ENSMUSG00000002409.19_27878919_27884542_1	chr7	+	1105	7	ISM	ENSMUSG00000002409.19	ENSMUST00000172761.8	2018	11	0	1806	0	-1806	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTACACCCTATGACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	27878918	27884542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492
ENSMUSG00000002409.19_27878919_27884585_1	chr7	+	1148	7	ISM	ENSMUSG00000002409.19	ENSMUST00000172761.8	2018	11	0	1763	0	-1763	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCCTCGTGGAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	27878918	27884585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492
ENSMUSG00000002409.19_27879025_27884639_1	chr7	+	1096	7	ISM	ENSMUSG00000002409.19	ENSMUST00000172761.8	2018	11	106	1709	106	-1709	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCCCCTGGAAGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	27879024	27884639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492
ENSMUSG00000002409.19_27880929_27884861_1	chr7	+	1201	7	ISM	ENSMUSG00000002409.19	ENSMUST00000172467.8	2523	11	1238	1858	1238	-1487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGCCCCTGCCCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	27880928	27884861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720
ENSMUSG00000002409.19_27881071_27885170_1	chr7	+	1091	8	ISM	ENSMUSG00000002409.19	ENSMUST00000172467.8	2523	11	1380	1549	1380	-1178	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTGCTGGGCGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	27881070	27885170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138
ENSMUSG00000002409.19_27881829_27885327_1	chr7	+	1094	8	ISM	ENSMUSG00000002409.19	ENST00000348817.7	2447	12	2935	1389	2138	-1021	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCTTCCGCCGCACGGC	NA	NA	NA	NA	NA	NA	NA	NA	27881828	27885327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885175_27885258
ENSMUSG00000002409.19_27881858_27885403_1	chr7	+	1141	8	ISM	ENSMUSG00000002409.19	ENST00000348817.7	2447	12	2964	1313	2167	-945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGACACCTGCCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	27881857	27885403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885175_27885258
ENSMUSG00000002409.19_27882065_27885804_1	chr7	+	1101	8	ISM	ENSMUSG00000002409.19	ENST00000348817.7	2447	12	3171	912	2374	-544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACGACAACAGAGCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	27882064	27885804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885175_27885258_27885455_27885786
ENSMUSG00000002409.19_27882125_27885848_1	chr7	+	1085	8	ISM	ENSMUSG00000002409.19	ENST00000348817.7	2447	12	3231	868	2434	-500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGGGCCCCCCATCAC	NA	NA	NA	NA	NA	NA	NA	NA	27882124	27885848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885175_27885258_27885455_27885786
ENSMUSG00000002409.19_27882181_27885994_1	chr7	+	1092	9	ISM	ENSMUSG00000002409.19	ENST00000348817.7	2447	12	3287	722	2490	-354	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGCCCCTGGGCAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	27882180	27885994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885175_27885258_27885455_27885786_27885894_27885976
ENSMUSG00000002409.19_27882505_27886022_1	chr7	+	1092	8	ISM	ENSMUSG00000002409.19	ENST00000348817.7	2447	12	3611	694	2814	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACAAGACACATCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	27882504	27886022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885175_27885258_27885455_27885786_27885894_27885976
ENSMUSG00000002409.19_27882547_27886081_1	chr7	+	1109	8	ISM	ENSMUSG00000002409.19	ENST00000348817.7	2447	12	3653	635	2856	-267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCCCCATTGCCCCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	27882546	27886081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885175_27885258_27885455_27885786_27885894_27885976
ENSMUSG00000002409.19_27882597_27886136_1	chr7	+	1114	8	ISM	ENSMUSG00000002409.19	ENST00000348817.7	2447	12	3703	580	2906	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGAGTTGATGGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	27882596	27886136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885175_27885258_27885455_27885786_27885894_27885976
ENSMUSG00000002409.19_27883788_27886348_1	chr7	+	1164	7	ISM	ENSMUSG00000002409.19	ENST00000348817.7	2447	12	4894	368	4097	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCCCCTCCCTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	27883787	27886348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27883953_27884492_27884640_27884720_27884862_27885138_27885175_27885258_27885455_27885786_27885894_27885976
ENSMUSG00000002409.19_27884556_27886510_1	chr7	+	1098	6	ISM	ENSMUSG00000002409.19	ENST00000348817.7	2447	12	5662	206	4865	162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCGCACCCTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	27884555	27886510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27884640_27884720_27884862_27885138_27885175_27885258_27885455_27885786_27885894_27885976
ENSMUSG00000002409.19_27884755_27886719_1	chr7	+	1189	5	ISM	ENSMUSG00000002409.19	ENST00000348817.7	2447	12	5861	-3	5064	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCTGAGCGTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	27884754	27886719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27884862_27885138_27885175_27885258_27885455_27885786_27885894_27885976
ENSMUSG00000002413.16_39590641_39639086_1	chr6	-	1998	13	ISM	ENSMUSG00000002413.16	ENST00000445336.2	2657	18	63040	0	63040	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGCCTCTGTCCGCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	39639086	39590640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937
ENSMUSG00000002413.16_39590826_39643226_1	chr6	-	1963	15	ISM	ENSMUSG00000002413.16	ENST00000445336.2	2657	18	58900	185	58900	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCCTTCCAGAGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	39643226	39590825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179
ENSMUSG00000002413.16_39590915_39643251_1	chr6	-	1899	15	ISM	ENSMUSG00000002413.16	ENST00000445336.2	2657	18	58875	274	58875	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCTTTCCAAATCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	39643251	39590914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179
ENSMUSG00000002413.16_39591046_39654370_1	chr6	-	1859	16	ISM	ENSMUSG00000002413.16	ENST00000445336.2	2657	18	47756	405	47756	-405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACCCTGAGTGAGACATT	NA	NA	NA	NA	NA	NA	NA	NA	39654370	39591045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311
ENSMUSG00000002413.16_39591046_39654419_1	chr6	-	1908	16	ISM	ENSMUSG00000002413.16	ENST00000445336.2	2657	18	47707	405	47707	-405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACCCTGAGTGAGACATT	NA	NA	NA	NA	NA	NA	NA	NA	39654419	39591045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311
ENSMUSG00000002413.16_39591046_39654492_1	chr6	-	1981	16	ISM	ENSMUSG00000002413.16	ENST00000445336.2	2657	18	47634	405	47634	-405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACCCTGAGTGAGACATT	NA	NA	NA	NA	NA	NA	NA	NA	39654492	39591045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311
ENSMUSG00000002413.16_39592595_39665279_1	chr6	-	1992	16	ISM	ENSMUSG00000002413.16	ENST00000445336.2	2657	18	36847	1954	36847	-1954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAAAGACATCCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	39665279	39592594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654576_39665177
ENSMUSG00000002413.16_39600509_39702127_1	chr6	-	1948	16	ISM	ENSMUSG00000002413.16	ENST00000445336.2	2657	18	-1	9868	-1	-9868	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCGTCTCTGGGAGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	39702127	39600508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654576_39665177_39665280_39702040
ENSMUSG00000002428.13_20113078_20146875_1	chr3	+	1605	14	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	17	24948	17	-24948	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTAAGGGTGATCCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	20113077	20146875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20130584_20130749_20136915_20136996_20137074_20137120_20137913_20137999_20140259_20140358_20145640_20145785_20146841
ENSMUSG00000002428.13_20113141_20146917_1	chr3	+	1584	14	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	80	24906	80	-24906	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACGCTCAGCAGACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	20113140	20146917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20130584_20130749_20136915_20136996_20137074_20137120_20137913_20137999_20140259_20140358_20145640_20145785_20146841
ENSMUSG00000002428.13_20113220_20152271_1	chr3	+	1596	15	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	159	19552	159	-19552	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTCTCTTCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	20113219	20152271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20130584_20130749_20136915_20136996_20137074_20137120_20137913_20137999_20140259_20140358_20145640_20145785_20146841_20146981_20152243
ENSMUSG00000002428.13_20117982_20152380_1	chr3	+	1654	14	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	4921	19443	4921	-19443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAAGTTTATGAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	20117981	20152380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20130584_20130749_20136915_20136996_20137074_20137120_20137913_20137999_20140259_20140358_20145640_20145785_20146841_20146981_20152243
ENSMUSG00000002428.13_20118096_20153982_1	chr3	+	1582	15	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	5035	17841	5035	-17841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACAAGCAAAATTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	20118095	20153982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20130584_20130749_20136915_20136996_20137074_20137120_20137913_20137999_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939
ENSMUSG00000002428.13_20118729_20154123_1	chr3	+	1671	14	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	5668	17700	5668	-17700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACCGAATGCCACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	20118728	20154123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20130584_20130749_20136915_20136996_20137074_20137120_20137913_20137999_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939
ENSMUSG00000002428.13_20118830_20159826_1	chr3	+	1588	15	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	5769	11997	5769	-11997	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCACACTATGCAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	20118829	20159826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20130584_20130749_20136915_20136996_20137074_20137120_20137913_20137999_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804
ENSMUSG00000002428.13_20119486_20159930_1	chr3	+	1658	14	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	6425	11893	6425	-11893	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAAATGGGATTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	20119485	20159930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20130584_20130749_20136915_20136996_20137074_20137120_20137913_20137999_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804
ENSMUSG00000002428.13_20121508_20160586_1	chr3	+	1634	14	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	8447	11237	8447	-11237	internal_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAATGTGCAATCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	20121507	20160586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20121585_20123129_20123322_20126532_20126629_20130584_20130749_20136915_20136996_20137074_20137120_20137913_20137999_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513
ENSMUSG00000002428.13_20123183_20162177_1	chr3	+	1626	14	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	10122	9646	10122	-9646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGTGCAGAAATGAGATA	NA	NA	NA	NA	NA	NA	NA	NA	20123182	20162177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20123322_20126532_20126629_20130584_20130749_20136915_20136996_20137074_20137120_20137913_20137999_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161
ENSMUSG00000002428.13_20123259_20162222_1	chr3	+	1595	14	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	10198	9601	10198	-9601	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCGAAGAATTGGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	20123258	20162222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20123322_20126532_20126629_20130584_20130749_20136915_20136996_20137074_20137120_20137913_20137999_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161
ENSMUSG00000002428.13_20126565_20162941_1	chr3	+	1588	14	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	13504	8882	13504	-8882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGAATTACGGACAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	20126564	20162941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20126629_20130584_20130749_20136915_20136996_20137074_20137120_20137913_20137999_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918
ENSMUSG00000002428.13_20130608_20163485_1	chr3	+	1604	14	ISM	ENSMUSG00000002428.13	ENSMUST00000002502.12	4955	25	18633	9169	17547	-8338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCGTTTAGATGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	20130607	20163485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468
ENSMUSG00000002428.13_20130678_20163535_1	chr3	+	1584	14	ISM	ENSMUSG00000002428.13	ENSMUST00000002502.12	4955	25	18703	9119	17617	-8288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCGTTTTCAAAACACAGA	NA	NA	NA	NA	NA	NA	NA	NA	20130677	20163535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468
ENSMUSG00000002428.13_20136914_20163649_1	chr3	+	1629	13	ISM	ENSMUSG00000002428.13	ENSMUST00000002502.12	4955	25	24939	9005	23853	-8174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACTTATATAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	20136913	20163649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468
ENSMUSG00000002428.13_20137073_20167600_1	chr3	+	1630	13	ISM	ENSMUSG00000002428.13	ENSMUST00000002502.12	4955	25	25098	5054	24012	-4223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTTTTAAAGTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	20137072	20167600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519
ENSMUSG00000002428.13_20137937_20170758_1	chr3	+	1583	13	ISM	ENSMUSG00000002428.13	ENSMUST00000002502.12	4955	25	25962	1896	24876	-1065	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAATATGTTGAAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	20137936	20170758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ENSMUSG00000002428.13_20140338_20170898_1	chr3	+	1587	12	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	27277	925	27277	-925	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTAAGGTCAGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	20140337	20170898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ENSMUSG00000002428.13_20145748_20171008_1	chr3	+	1570	11	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	32687	815	32687	-815	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTTACTGACACATCTT	NA	NA	NA	NA	NA	NA	NA	NA	20145747	20171008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ENSMUSG00000002428.13_20146907_20171119_1	chr3	+	1579	10	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	33846	704	33846	-704	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGGTTGGCATTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	20146906	20171119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ENSMUSG00000002428.13_20146954_20171173_1	chr3	+	1586	10	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	33893	650	33893	-650	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATCTTCACTGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	20146953	20171173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ENSMUSG00000002428.13_20152320_20171274_1	chr3	+	1584	9	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	39259	549	39259	-549	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACAAGTATATACAGACT	NA	NA	NA	NA	NA	NA	NA	NA	20152319	20171274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ENSMUSG00000002428.13_20152345_20171445_1	chr3	+	1730	9	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	39284	378	39284	-378	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAAAGCATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	20152344	20171445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ENSMUSG00000002428.13_20153974_20171445_1	chr3	+	1661	8	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	40913	378	40913	-378	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAAAGCATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	20153973	20171445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ENSMUSG00000002428.13_20160523_20171626_1	chr3	+	1562	6	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	47462	197	47462	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGTGTTTTGGAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	20160522	20171626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ENSMUSG00000002428.13_20160559_20171696_1	chr3	+	1596	6	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	47498	127	47498	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGGATGGAAATTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	20160558	20171696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ENSMUSG00000002428.13_20160625_20171743_1	chr3	+	1577	6	ISM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	47564	80	47564	-80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACATTTTAATCCCGAAT	NA	NA	NA	NA	NA	NA	NA	NA	20160624	20171743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ENSMUSG00000002455.15_181243166_181262429_1	chr2	+	515	4	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	57	35015	54	-35015	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACCTTAAGGTGAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	181243165	181262429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361
ENSMUSG00000002455.15_181243277_181263631_1	chr2	+	467	5	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	168	33813	165	-33813	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGATGCCAGAAACAAACGT	NA	NA	NA	NA	NA	NA	NA	NA	181243276	181263631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361_181262441_181263579
ENSMUSG00000002455.15_181250008_181263987_1	chr2	+	482	5	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	6899	33457	6896	-33457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTGAACACTCCATACCC	NA	NA	NA	NA	NA	NA	NA	NA	181250007	181263987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181250082_181257769_181257889_181262361_181262441_181263579_181263757_181263954
ENSMUSG00000002455.15_181262360_181273278_1	chr2	+	465	4	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	19251	24166	19248	-24166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATCTAAATTCCATGAT	NA	NA	NA	NA	NA	NA	NA	NA	181262359	181273278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181262441_181263579_181263757_181263954_181264111_181273227
ENSMUSG00000002455.15_181263588_181273809_1	chr2	+	506	4	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	20479	23635	20476	-23635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGAAGTCACTGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	181263587	181273809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181263757_181263954_181264111_181273227_181273323_181273723
ENSMUSG00000002455.15_181263634_181273867_1	chr2	+	518	4	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	20525	23577	20522	-23577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGCCCCAAGGTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	181263633	181273867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181263757_181263954_181264111_181273227_181273323_181273723
ENSMUSG00000002455.15_181263994_181274651_1	chr2	+	473	4	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	20885	22793	20882	-22793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAGAGCAGCAGAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	181263993	181274651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181264111_181273227_181273323_181273723_181273881_181274547
ENSMUSG00000002455.15_181264070_181277854_1	chr2	+	485	5	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	20961	19590	20958	-19590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAAAGCAGCTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	181264069	181277854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825
ENSMUSG00000002455.15_181273763_181278760_1	chr2	+	475	4	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	30654	18684	30651	-18684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACAGATCGGCACATCTG	NA	NA	NA	NA	NA	NA	NA	NA	181273762	181278760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181273881_181274547_181274711_181277825_181277945_181278685
ENSMUSG00000002455.15_181273821_181278814_1	chr2	+	471	4	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	30712	18630	30709	-18630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACTCAGATGGTGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	181273820	181278814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181273881_181274547_181274711_181277825_181277945_181278685
ENSMUSG00000002455.15_181274584_181282408_1	chr2	+	489	4	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	31475	15036	31472	-15036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGTGTGGCCACGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	181274583	181282408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181274711_181277825_181277945_181278685_181278905_181282384
ENSMUSG00000002455.15_181274640_181282459_1	chr2	+	484	4	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	31531	14985	31528	-14985	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAGGAGGAAGATCGCAA	NA	NA	NA	NA	NA	NA	NA	NA	181274639	181282459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181274711_181277825_181277945_181278685_181278905_181282384
ENSMUSG00000002455.15_181277869_181287319_1	chr2	+	474	4	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	34760	10125	34757	-10125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCTTCCCCAGCAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	181277868	181287319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181277945_181278685_181278905_181282384_181282508_181287263
ENSMUSG00000002455.15_181277923_181287385_1	chr2	+	486	4	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	34814	10059	34811	-10059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGGTCAGTTTCCACT	NA	NA	NA	NA	NA	NA	NA	NA	181277922	181287385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181277945_181278685_181278905_181282384_181282508_181287263
ENSMUSG00000002455.15_181278705_181289134_1	chr2	+	498	4	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	35596	8310	35593	-8310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCTATGGCTCATGGGT	NA	NA	NA	NA	NA	NA	NA	NA	181278704	181289134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181278905_181282384_181282508_181287263_181287386_181289081
ENSMUSG00000002455.15_181278857_181290861_1	chr2	+	475	5	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	35748	6583	35745	-6583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGTCAGAGAACAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	181278856	181290861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181278905_181282384_181282508_181287263_181287386_181289081_181289221_181290818
ENSMUSG00000002455.15_181282487_181291284_1	chr2	+	472	5	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	39378	6160	39375	-6160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTCTGAGGCACTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	181282486	181291284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181282508_181287263_181287386_181289081_181289221_181290818_181290939_181291214
ENSMUSG00000002455.15_181287362_181291391_1	chr2	+	460	4	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	44253	6053	44250	-6053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCCTCTGTCAAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	181287361	181291391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181287386_181289081_181289221_181290818_181290939_181291214
ENSMUSG00000002455.15_181289129_181291982_1	chr2	+	482	4	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	46020	5462	46017	-5462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAATCTCGTCTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	181289128	181291982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181289221_181290818_181290939_181291214_181291392_181291889
ENSMUSG00000002455.15_181290898_181294265_1	chr2	+	483	5	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	47789	3179	47786	-3179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAGAGAAAGACCAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	181290897	181294265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181290939_181291214_181291392_181291889_181292024_181292878_181292971_181294226
ENSMUSG00000002455.15_181291259_181296661_1	chr2	+	507	5	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	48150	783	48147	-783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGGAGTGGTTCCATCGCA	NA	NA	NA	NA	NA	NA	NA	NA	181291258	181296661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181291392_181291889_181292024_181292878_181292971_181294226_181294342_181296628
ENSMUSG00000002455.15_181291933_181297284_1	chr2	+	495	5	ISM	ENSMUSG00000002455.15	ENSMUST00000002529.7	3054	21	48821	169	48821	-160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCAAGGATATCACCAAC	NA	NA	NA	NA	NA	NA	NA	NA	181291932	181297284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181292024_181292878_181292971_181294226_181294342_181296628_181296756_181297214
ENSMUSG00000002455.15_181291993_181297333_1	chr2	+	484	5	ISM	ENSMUSG00000002455.15	ENSMUST00000002529.7	3054	21	48881	120	48881	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGGCCGCCCGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	181291992	181297333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181292024_181292878_181292971_181294226_181294342_181296628_181296756_181297214
ENSMUSG00000002458.14_181330633_181333350_1	chr2	-	1037	4	ISM	ENSMUSG00000002458.14	ENSMUST00000108769.8	1460	5	2373	333	260	178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAACTTTAAAGTTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	181333350	181330632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_181331405_181331494_181331570_181333025_181333148_181333282
ENSMUSG00000002458.14_181330859_181335770_1	chr2	-	856	6	NNC	ENSMUSG00000002458.14	novel	1511	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1358	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGGCCCTGTCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	181335770	181330858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333380_181335673
ENSMUSG00000002458.14_181330859_181335770_2	chr2	-	857	6	NNC	ENSMUSG00000002458.14	novel	818	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1472	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGGCCCTGTCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	181335770	181330858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_181331084_181331169_181331405_181331490_181331570_181333025_181333148_181333282_181333380_181335671
ENSMUSG00000002458.14_181330859_181335770_3	chr2	-	850	6	NNC	ENSMUSG00000002458.14	novel	1511	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGGCCCTGTCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	181335770	181330858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_181331089_181331169_181331405_181331494_181331562_181333025_181333148_181333282_181333380_181335671
ENSMUSG00000002458.14_181330859_181335770_4	chr2	-	851	6	NNC	ENSMUSG00000002458.14	novel	1511	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1085	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGGCCCTGTCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	181335770	181330858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333141_181333282_181333380_181335671
ENSMUSG00000002458.14_181330859_181335770_5	chr2	-	858	6	NIC	ENSMUSG00000002458.14	novel	1511	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1734	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGGCCCTGTCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	181335770	181330858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333380_181335671
ENSMUSG00000002459.18_4979981_4982587_1	chr1	-	956	2	ISM	ENSMUSG00000002459.18	ENSMUST00000119256.8	883	5	106371	-644	106371	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGTTGGTGGAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	4982587	4979980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4980886_4982536
ENSMUSG00000002459.18_4980115_4982711_1	chr1	-	946	2	ISM	ENSMUSG00000002459.18	ENSMUST00000119256.8	883	5	106247	-510	106247	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCCCCCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	4982711	4980114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4980886_4982536
ENSMUSG00000002459.18_4980268_4994099_1	chr1	-	967	4	ISM	ENSMUSG00000002459.18	ENSMUST00000119256.8	883	5	94859	-357	94859	357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATTCTGAATACTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	4994099	4980267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4980886_4982536_4982772_4987119_4987204_4994069
ENSMUSG00000002459.18_4980327_4994143_1	chr1	-	952	4	ISM	ENSMUSG00000002459.18	ENSMUST00000119256.8	883	5	94815	-298	94815	298	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATACTGTATTACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	4994143	4980326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4980886_4982536_4982772_4987119_4987204_4994069
ENSMUSG00000002475.17_10644673_10706060_1	chr18	-	1354	8	ISM	ENSMUSG00000002475.17	ENSMUST00000117828.9	1962	9	711	262	646	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGATTTGAATATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	10706060	10644672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_10645236_10647725_10647892_10647969_10648019_10652187_10652362_10658779_10658893_10682068_10682115_10704547_10704731_10706000
ENSMUSG00000002477.6_10617775_10628231_1	chr18	+	853	4	NNC	ENSMUSG00000002477.6	novel	858	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGGTGCATGTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	10617774	10628231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_10617927_10623630_10623708_10626825_10627018_10627799
ENSMUSG00000002477.6_10617775_10628231_2	chr18	+	853	4	NNC	ENSMUSG00000002477.6	novel	858	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2015	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGGTGCATGTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	10617774	10628231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_10617927_10623630_10623708_10626831_10627018_10627793
ENSMUSG00000002477.6_10617775_10628231_3	chr18	+	854	4	NNC	ENSMUSG00000002477.6	novel	858	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGGTGCATGTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	10617774	10628231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_10617922_10623630_10623708_10626825_10627018_10627793
ENSMUSG00000002477.6_10617865_10628008_1	chr18	+	469	3	FSM	ENSMUSG00000002477.6	ENST00000582475.1	465	3	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTATCTACTATATTCACA	NA	NA	NA	NA	NA	NA	NA	NA	10617864	10628008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_10617927_10626825_10627018_10627793
ENSMUSG00000002486.16_114858182_114860288_1	chr5	+	1268	2	ISM	ENSMUSG00000002486.16	ENSMUST00000094441.11	2882	13	12361	100	12361	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGATGTGGCCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	114858181	114860288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114858330_114859168
ENSMUSG00000002504.16_24858420_24860863_1	chr17	-	1122	4	ISM	ENSMUSG00000002504.16	ENSMUST00000019684.13	1717	6	3101	160	3068	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGTATGATCCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	24860863	24858419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792
ENSMUSG00000002504.16_24858488_24860905_1	chr17	-	1096	4	ISM	ENSMUSG00000002504.16	ENSMUST00000019684.13	1717	6	3059	228	3026	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGGACAAGCCCCTTATC	NA	NA	NA	NA	NA	NA	NA	NA	24860905	24858487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792
ENSMUSG00000002504.16_24858557_24860946_1	chr17	-	1068	4	ISM	ENSMUSG00000002504.16	ENSMUST00000019684.13	1717	6	3018	297	2985	180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGAATGCAGAGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	24860946	24858556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792
ENSMUSG00000002504.16_24858744_24866563_1	chr17	-	1124	6	FSM	ENSMUSG00000002504.16	ENSMUST00000234121.2	1840	6	237	479	237	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTCTTACCCACCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	24866563	24858743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24866500
ENSMUSG00000002504.16_24858744_24866611_1	chr17	-	1172	6	FSM	ENSMUSG00000002504.16	ENSMUST00000234121.2	1840	6	189	479	189	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTCTTACCCACCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	24866611	24858743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24866500
ENSMUSG00000002504.16_24858870_24866684_1	chr17	-	1119	6	FSM	ENSMUSG00000002504.16	ENSMUST00000234121.2	1840	6	116	605	116	-126	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCGCTTTTTTTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	24866684	24858869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24866500
ENSMUSG00000002504.16_24858933_24861298_1	chr17	-	763	4	ISM	ENSMUSG00000002504.16	ENSMUST00000234505.2	1137	5	2633	189	2633	-189	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGTCTGCCAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	24861298	24858932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24859364_24860682_24860727_24860792_24860947_24861164
ENSMUSG00000002504.16_24858982_24860814_1	chr17	-	478	4	ISM	ENSMUSG00000002504.16	ENST00000432365.6	1477	7	8338	245	3117	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCAAGACAGACACGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	24860814	24858981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24859331_24859568_24859632_24860682_24860727_24860792
ENSMUSG00000002504.16_24859084_24869050_1	chr17	-	1061	7	FSM	ENSMUSG00000002504.16	ENSMUST00000002572.6	2136	7	251	824	102	-340	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCCATGAACCCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	24869050	24859083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
ENSMUSG00000002504.16_24859104_24869136_1	chr17	-	1127	7	FSM	ENSMUSG00000002504.16	ENSMUST00000002572.6	2136	7	165	844	16	-360	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCACCCAGAAACCAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	24869136	24859103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
ENSMUSG00000002504.16_24859229_24861257_1	chr17	-	456	5	ISM	ENSMUSG00000002504.16	ENST00000432365.6	1477	7	7895	492	2674	-485	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAGATCTTCAGCAACTT	NA	NA	NA	NA	NA	NA	NA	NA	24861257	24859228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24859331_24859568_24859632_24860682_24860727_24860792_24860947_24861164
ENSMUSG00000002504.16_24859246_24869263_1	chr17	-	1112	7	FSM	ENSMUSG00000002504.16	ENSMUST00000002572.6	2136	7	38	986	0	-502	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACTGGAACCGGAAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	24869263	24859245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
ENSMUSG00000002524.18_75942039_75943802_1	chr15	-	1215	5	ISM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	8959	0	8937	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	75943802	75942038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588
ENSMUSG00000002524.18_75942039_75944174_1	chr15	-	1308	6	ISM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	8587	0	8565	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	75944174	75942038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081
ENSMUSG00000002524.18_75942177_75952719_1	chr15	-	1539	10	FSM	ENSMUSG00000002524.18	ENST00000527197.5	1559	10	20	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCCTCATTTCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	75952719	75942176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75952698
ENSMUSG00000002524.18_75942672_75949551_1	chr15	-	1246	9	ISM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	3210	633	3188	-495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGAGCACATGAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	75949551	75942671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449
ENSMUSG00000002524.18_75942672_75952719_1	chr15	-	1267	10	ISM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	42	633	20	-495	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGAGCACATGAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	75952719	75942671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ENSMUSG00000002524.18_75942818_75952719_1	chr15	-	1121	10	ISM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	42	779	20	-641	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTATTCCGGTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	75952719	75942817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ENSMUSG00000002524.18_75943755_75947436_1	chr15	-	400	5	ISM	ENSMUSG00000002524.18	ENSMUST00000100527.13	1881	12	5326	1724	5303	-1578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGAGGAAGCTAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	75947436	75943754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75943803_75944081_75944175_75944255_75944418_75946455_75946507_75947390
ENSMUSG00000002524.18_75944148_75947623_1	chr15	-	368	5	ISM	ENSMUSG00000002524.18	ENSMUST00000100527.13	1881	12	5139	2117	5116	-1971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAAGCTGCGCAGCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	75947623	75944147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75944175_75944255_75944418_75946455_75946507_75947390_75947481_75947585
ENSMUSG00000002524.18_75944343_75949551_1	chr15	-	414	5	ISM	ENSMUSG00000002524.18	ENSMUST00000100527.13	1881	12	3211	2312	3188	-2166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACACTATTCGCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	75949551	75944342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75944418_75946455_75946507_75947390_75947481_75947585_75947682_75949449
ENSMUSG00000002524.18_75946456_75952719_1	chr15	-	360	5	ISM	ENSMUSG00000002524.18	ENSMUST00000100527.13	1881	12	43	4425	20	-4279	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAATAGAAATGCTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	75952719	75946455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75946507_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ENSMUSG00000002546.18_32178367_32197933_1	chr2	+	4259	26	FSM	ENSMUSG00000002546.18	ENSMUST00000239447.2	4361	26	102	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGGGTGTTCGTCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	32178366	32197933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ENSMUSG00000002550.17_32145014_32149645_1	chr2	-	1648	6	ISM	ENSMUSG00000002550.17	ENSMUST00000002625.15	2005	7	526	0	526	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTCCTGTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	32149645	32145013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591
ENSMUSG00000002550.17_32145014_32149751_1	chr2	-	1754	6	ISM	ENSMUSG00000002550.17	ENSMUST00000002625.15	2005	7	420	0	420	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTCCTGTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	32149751	32145013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591
ENSMUSG00000002550.17_32145293_32150073_1	chr2	-	1628	7	FSM	ENSMUSG00000002550.17	ENSMUST00000002625.15	2005	7	98	279	98	-279	multi-exon	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTGCACACCCAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	32150073	32145292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
ENSMUSG00000002580.8_98328534_98329714_1	chr11	-	644	4	FSM	ENSMUSG00000002580.8	ENSMUST00000002655.8	747	4	103	0	73	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGTGTGTTTATGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	98329714	98328533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_98328972_98329062_98329140_98329472_98329571_98329683
ENSMUSG00000002580.8_98328637_98329817_1	chr11	-	644	4	FSM	ENSMUSG00000002580.8	ENSMUST00000002655.8	747	4	0	103	0	87	multi-exon	FALSE	canonical	NA	NA	NA	NA	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATACCTTTCAGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	98329817	98328636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_98328972_98329062_98329140_98329472_98329571_98329683
ENSMUSG00000002580.8_98328696_98329817_1	chr11	-	585	4	FSM	ENSMUSG00000002580.8	ENSMUST00000002655.8	747	4	0	162	0	28	multi-exon	FALSE	canonical	NA	NA	NA	NA	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCACCATCGCTCTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	98329817	98328695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_98328972_98329062_98329140_98329472_98329571_98329683
ENSMUSG00000002602.17_25457558_25460230_1	chr7	-	936	2	ISM	ENSMUSG00000002602.17	ENSMUST00000085948.11	3899	19	27900	503	27882	-503	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTAACAGTTTAGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	25460230	25457557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25458439_25460175
ENSMUSG00000002602.17_25457671_25460873_1	chr7	-	949	3	ISM	ENSMUSG00000002602.17	ENSMUST00000085948.11	3899	19	27257	616	27239	-616	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTTCTAGACTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	25460873	25457670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25458439_25460175_25460313_25460829
ENSMUSG00000002602.17_25457828_25462728_1	chr7	-	928	4	ISM	ENSMUSG00000002602.17	ENSMUST00000085948.11	3899	19	25402	773	25384	-773	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGAGATGCTTGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	25462728	25457827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25458439_25460175_25460313_25460829_25460990_25462708
ENSMUSG00000002602.17_25457939_25463489_1	chr7	-	1029	5	ISM	ENSMUSG00000002602.17	ENSMUST00000085948.11	3899	19	24641	884	24623	-884	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCCTATCCATAACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	25463489	25457938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25458439_25460175_25460313_25460829_25460990_25462708_25462819_25463367
ENSMUSG00000002602.17_25457989_25463489_1	chr7	-	979	5	ISM	ENSMUSG00000002602.17	ENSMUST00000085948.11	3899	19	24641	934	24623	-934	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGCAGAATGGCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	25463489	25457988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25458439_25460175_25460313_25460829_25460990_25462708_25462819_25463367
ENSMUSG00000002602.17_25458342_25469703_1	chr7	-	954	9	ISM	ENSMUSG00000002602.17	ENSMUST00000085948.11	3899	19	18427	1287	18409	-1287	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTGCTCAGGAGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	25469703	25458341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25458439_25460175_25460313_25460829_25460990_25462708_25462819_25463367_25463490_25463846_25463940_25465942_25466021_25466217_25466314_25469642
ENSMUSG00000002602.17_25460909_25472878_1	chr7	-	943	10	ISM	ENSMUSG00000002602.17	ENSMUST00000002677.11	4265	20	15234	4211	15234	-3854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCATTGCCAAGATGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	25472878	25460908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25460990_25462708_25462819_25463367_25463490_25463846_25463940_25465942_25466021_25466217_25466314_25469642_25469735_25470057_25470191_25472523_25472551_25472767
ENSMUSG00000002602.17_25462708_25473648_1	chr7	-	1043	10	ISM	ENSMUSG00000002602.17	ENSMUST00000002677.11	4265	20	14464	6010	14464	-5653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGCAAGCCCTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	25473648	25462707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25462819_25463367_25463490_25463846_25463940_25465942_25466021_25466217_25466314_25469642_25469735_25470057_25470191_25472523_25472551_25472767_25472919_25473508
ENSMUSG00000002602.17_25463410_25473993_1	chr7	-	944	10	ISM	ENSMUSG00000002602.17	ENSMUST00000002677.11	4265	20	14119	6712	14119	-6355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTTTCCTCCTGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	25473993	25463409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25463490_25463846_25463940_25465942_25466021_25466217_25466314_25469642_25469735_25470057_25470191_25472523_25472551_25472767_25472919_25473508_25473649_25473939
ENSMUSG00000002602.17_25463463_25474103_1	chr7	-	1001	10	ISM	ENSMUSG00000002602.17	ENSMUST00000002677.11	4265	20	14009	6765	14009	-6408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTTTCCCAGAACCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	25474103	25463462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25463490_25463846_25463940_25465942_25466021_25466217_25466314_25469642_25469735_25470057_25470191_25472523_25472551_25472767_25472919_25473508_25473649_25473939
ENSMUSG00000002602.17_25466217_25477915_1	chr7	-	972	8	ISM	ENSMUSG00000002602.17	ENSMUST00000002677.11	4265	20	10197	9519	10197	-9162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTACTCCAGCACACCT	NA	NA	NA	NA	NA	NA	NA	NA	25477915	25466216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25466314_25469642_25469735_25470057_25470191_25472523_25472551_25472767_25472919_25473508_25473649_25473939_25474151_25477794
ENSMUSG00000002602.17_25469687_25485283_1	chr7	-	932	9	ISM	ENSMUSG00000002602.17	ENSMUST00000002677.11	4265	20	2829	12989	2829	-12632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTCCGAAAGTCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	25485283	25469686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25469735_25470057_25470191_25472523_25472551_25472767_25472919_25473508_25473649_25473939_25474151_25477794_25477911_25478048_25478130_25485258
ENSMUSG00000002602.17_25470154_25485428_1	chr7	-	933	8	ISM	ENSMUSG00000002602.17	ENSMUST00000002677.11	4265	20	2684	13456	2684	-13099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATGTACTGCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	25485428	25470153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25470191_25472523_25472551_25472767_25472919_25473508_25473649_25473939_25474151_25477794_25477911_25478048_25478130_25485258
ENSMUSG00000002602.17_25472847_25486748_1	chr7	-	931	8	ISM	ENSMUSG00000002602.17	ENSMUST00000085948.11	3899	19	1382	15792	1364	-15792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTCTGTGACAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	25486748	25472846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25472919_25473508_25473649_25473939_25474151_25477794_25477911_25478048_25478130_25485258_25485436_25486311_25486413_25486715
ENSMUSG00000002602.17_25473564_25486869_1	chr7	-	925	7	ISM	ENSMUSG00000002602.17	ENSMUST00000085948.11	3899	19	1261	16509	1243	-16509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGCACCCTGTTAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	25486869	25473563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25473649_25473939_25474151_25477794_25477911_25478048_25478130_25485258_25485436_25486311_25486413_25486715
ENSMUSG00000002602.17_25473615_25486997_1	chr7	-	1002	7	ISM	ENSMUSG00000002602.17	ENSMUST00000085948.11	3899	19	1133	16560	1115	-16560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGAATGGGAGCCAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	25486997	25473614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25473649_25473939_25474151_25477794_25477911_25478048_25478130_25485258_25485436_25486311_25486413_25486715
ENSMUSG00000002602.17_25473962_25487881_1	chr7	-	932	7	ISM	ENSMUSG00000002602.17	ENSMUST00000085948.11	3899	19	249	16907	231	-16907	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGGAGACCACAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	25487881	25473961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25474151_25477794_25477911_25478048_25478130_25485258_25485436_25486311_25486413_25486715_25486942_25487839
ENSMUSG00000002602.17_25474022_25487938_1	chr7	-	929	7	ISM	ENSMUSG00000002602.17	ENSMUST00000085948.11	3899	19	192	16967	174	-16967	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACATCCGGATATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	25487938	25474021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25474151_25477794_25477911_25478048_25478130_25485258_25485436_25486311_25486413_25486715_25486942_25487839
ENSMUSG00000002602.17_25474074_25487990_1	chr7	-	929	7	ISM	ENSMUSG00000002602.17	ENSMUST00000085948.11	3899	19	140	17019	122	-17019	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTGCCCCCCCACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	25487990	25474073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25474151_25477794_25477911_25478048_25478130_25485258_25485436_25486311_25486413_25486715_25486942_25487839
ENSMUSG00000002602.17_25477794_25488112_1	chr7	-	975	6	ISM	ENSMUSG00000002602.17	ENSMUST00000085948.11	3899	19	18	20739	0	-20739	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACCCTCTGACTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	25488112	25477793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25477911_25478048_25478130_25485258_25485436_25486311_25486413_25486715_25486942_25487839
ENSMUSG00000002603.16_25387459_25404226_1	chr7	+	641	5	FSM	ENSMUSG00000002603.16	ENST00000677934.1	1081	5	165	275	165	-275	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACAACCCGGGCGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	25387458	25404226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_25387649_25391801_25391963_25393647_25393766_25403549_25403704_25404208
ENSMUSG00000002603.16_25387573_25404286_1	chr7	+	587	5	FSM	ENSMUSG00000002603.16	ENST00000677934.1	1081	5	279	215	279	-215	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCGTCTACTACGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	25387572	25404286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_25387649_25391801_25391963_25393647_25393766_25403549_25403704_25404208
ENSMUSG00000002603.16_25387573_25404337_1	chr7	+	638	5	FSM	ENSMUSG00000002603.16	ENST00000677934.1	1081	5	279	164	279	-164	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTGTGCGCTCCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	25387572	25404337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_25387649_25391801_25391963_25393647_25393766_25403549_25403704_25404208
ENSMUSG00000002603.16_25391843_25404502_1	chr7	+	686	4	ISM	ENSMUSG00000002603.16	ENST00000677934.1	1081	5	4549	-1	4549	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGTCTCCGTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	25391842	25404502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_25391963_25393647_25393766_25403549_25403704_25404208
ENSMUSG00000002608.9_25411507_25413909_1	chr7	-	1164	2	ISM	ENSMUSG00000002608.9	ENSMUST00000002683.3	3032	5	4604	976	4604	-976	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTCCCTTCCCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	25413909	25411506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25412539_25413777
ENSMUSG00000002608.9_25412115_25415531_1	chr7	-	1196	4	ISM	ENSMUSG00000002608.9	ENSMUST00000002683.3	3032	5	2982	1584	2982	-1584	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTCTTGTTCTTACTCA	NA	NA	NA	NA	NA	NA	NA	NA	25415531	25412114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159
ENSMUSG00000002625.11_32540398_32557490_1	chr17	-	1797	11	NNC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	11985	0	intron_retention	TRUE	non_canonical	NA	NA	NA	NA	1058	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	32557490	32540397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_32540760_32540869_32540966_32551452_32551507_32551785_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244
ENSMUSG00000002625.11_32540398_32557490_2	chr17	-	1796	11	NNC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	11985	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	32557490	32540397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_32540760_32540869_32540966_32551452_32551507_32551784_32551891_32551978_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244
ENSMUSG00000002625.11_32540398_32557490_3	chr17	-	1797	11	NNC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	11985	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	32557490	32540397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_32540760_32540869_32540966_32551452_32551507_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554932_32555003_32555080_32555178_32555258_32555713_32557244
ENSMUSG00000002625.11_32540398_32557490_4	chr17	-	1797	11	NNC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	11985	0	intron_retention	TRUE	non_canonical	NA	NA	NA	NA	1028	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	32557490	32540397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_32540760_32540869_32540966_32551452_32551507_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555259_32555713_32557244
ENSMUSG00000002625.11_32540398_32557798_1	chr17	-	1834	12	NNC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	11677	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	32557798	32540397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_32540760_32540869_32540966_32551452_32551507_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557760
ENSMUSG00000002625.11_32540398_32557798_2	chr17	-	1828	12	NNC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	11677	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	2428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	32557798	32540397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_32540760_32540869_32540966_32551452_32551507_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557246_32557489_32557764
ENSMUSG00000002625.11_32540398_32564374_1	chr17	-	1902	13	NNC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	5101	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	3419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	32564374	32540397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_32540760_32540869_32540966_32551452_32551507_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554594_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297
ENSMUSG00000002625.11_32540398_32564374_2	chr17	-	1900	13	NNC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	5101	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	3471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	32564374	32540397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_32540760_32540869_32540966_32551452_32551507_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32554997_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297
ENSMUSG00000002625.11_32540398_32564374_3	chr17	-	1906	13	ISM	ENSMUSG00000002625.11	ENST00000679638.1	1916	14	5101	-3	5101	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	32564374	32540397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_32540760_32540869_32540966_32551452_32551507_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297
ENSMUSG00000002625.11_32540398_32564374_4	chr17	-	1902	13	NNC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	5101	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	3852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	32564374	32540397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_32540760_32540869_32540966_32551452_32551507_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557481_32557760_32557798_32564297
ENSMUSG00000002625.11_32540398_32564374_5	chr17	-	1902	12	NNC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	5101	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	2740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	32564374	32540397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_32540760_32540869_32540966_32551452_32551507_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32564268
ENSMUSG00000002625.11_32540585_32564374_1	chr17	-	1719	13	ISM	ENSMUSG00000002625.11	ENST00000679638.1	1916	14	5101	184	5101	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCACCAGAAGAGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	32564374	32540584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_32540760_32540869_32540966_32551452_32551507_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297
ENSMUSG00000002635.12_33883924_33896052_1	chr7	-	1255	7	NNC	ENSMUSG00000002635.12	novel	1295	7	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTGGTTTATTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	33896052	33883923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895966
ENSMUSG00000002658.10_57310405_57310987_1	chr17	-	391	3	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	7301	0	7301	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGTGCGAGTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	57310987	57310404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57310632_57310720_57310812_57310914
ENSMUSG00000002658.10_57310564_57311369_1	chr17	-	433	5	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	6919	159	6919	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAAGAAGTTCCAGACC	NA	NA	NA	NA	NA	NA	NA	NA	57311369	57310563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308
ENSMUSG00000002658.10_57310617_57311428_1	chr17	-	439	5	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	6860	212	6860	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGACGCTGTGCGCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	57311428	57310616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308
ENSMUSG00000002658.10_57310721_57311572_1	chr17	-	486	5	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	6716	316	6716	-316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTTCAGACAGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	57311572	57310720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510
ENSMUSG00000002658.10_57310921_57311714_1	chr17	-	438	5	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	6574	516	6574	-516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGGTGAGTGCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	57311714	57310920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665
ENSMUSG00000002658.10_57310986_57311752_1	chr17	-	411	5	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	6536	581	6536	-581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACTCCCAGTGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	57311752	57310985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665
ENSMUSG00000002658.10_57311024_57311819_1	chr17	-	440	5	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	6469	619	6469	-619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCGGGGGGGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	57311819	57311023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665
ENSMUSG00000002658.10_57311167_57312414_1	chr17	-	420	5	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	5874	762	5874	-762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGCGACATTGACAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	57312414	57311166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359
ENSMUSG00000002658.10_57311406_57312544_1	chr17	-	424	4	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	5744	1001	5744	-1001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGGAGAGTGAGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	57312544	57311405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57311429_57311510_57311573_57311665_57311820_57312359
ENSMUSG00000002658.10_57311541_57314029_1	chr17	-	415	4	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	4259	1136	4259	-1136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCCCCAGCAGGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	57314029	57311540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57311573_57311665_57311820_57312359_57312545_57313985
ENSMUSG00000002658.10_57311787_57314748_1	chr17	-	425	4	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	3540	1382	3540	-1382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGACCAAGGCAGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	57314748	57311786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57311820_57312359_57312545_57313985_57314157_57314712
ENSMUSG00000002658.10_57312399_57314833_1	chr17	-	438	3	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	3455	1994	3455	-1994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCCTCCGATGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	57314833	57312398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57312545_57313985_57314157_57314712
ENSMUSG00000002658.10_57312525_57316724_1	chr17	-	422	4	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	1564	2120	1564	-2120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCAGCATCATGCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	57316724	57312524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57312545_57313985_57314157_57314712_57314907_57316687
ENSMUSG00000002658.10_57313985_57318022_1	chr17	-	486	4	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	266	3580	266	-3580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCAAAGGTGGTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	57318022	57313984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57314157_57314712_57314907_57316687_57316761_57317975
ENSMUSG00000002658.10_57314094_57318153_1	chr17	-	422	5	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	135	3689	135	-3689	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGATGGTGCCTTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	57318153	57314093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
ENSMUSG00000002660.9_57297392_57299847_1	chr17	+	313	4	ISM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	87	3341	87	-3341	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCATCTACGACACAATGC	NA	NA	NA	NA	NA	NA	NA	NA	57297391	57299847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_57297514_57297605_57297678_57298293_57298391_57299825
ENSMUSG00000002660.9_57299927_57302967_1	chr17	+	283	3	ISM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	2622	221	2622	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGGGAGGATGAGCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	57299926	57302967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_57300014_57300447_57300554_57302877
ENSMUSG00000002661.15_57304343_57306137_1	chr17	+	732	4	FSM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	0	185	0	-174	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGGGATCTTCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	57304342	57306137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_57304568_57305388_57305563_57305670_57305796_57305929
ENSMUSG00000002661.15_57305480_57306340_1	chr17	+	619	3	ISM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	1137	-18	1137	18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTCCTTTCCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	57305479	57306340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_57305563_57305670_57305796_57305929
ENSMUSG00000002688.9_50388014_50411366_1	chr12	-	1148	3	ISM	ENSMUSG00000002688.9	ENST00000331968.11	3507	18	284393	0	284393	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTGTCATACTAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	50411366	50388013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_50389004_50389836_50389923_50411294
ENSMUSG00000002688.9_50388014_50411412_1	chr12	-	1194	3	ISM	ENSMUSG00000002688.9	ENST00000331968.11	3507	18	284347	0	284347	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTGTCATACTAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	50411412	50388013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_50389004_50389836_50389923_50411294
ENSMUSG00000002688.9_50388404_50413132_1	chr12	-	1101	5	ISM	ENSMUSG00000002688.9	ENST00000331968.11	3507	18	282627	390	282627	-390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTTGTAAGCAAACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	50413132	50388403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_50389004_50389836_50389923_50411294_50411563_50412396_50412496_50413084
ENSMUSG00000002688.9_50411340_50438154_1	chr12	-	1121	9	ISM	ENSMUSG00000002688.9	ENST00000331968.11	3507	18	257605	23326	257605	-23326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATGTATCCACCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	50438154	50411339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_50411563_50412396_50412496_50413084_50413247_50430182_50430290_50431925_50431999_50433998_50434052_50435035_50435316_50436692_50436771_50438108
ENSMUSG00000002688.9_50413089_50441459_1	chr12	-	1156	9	ISM	ENSMUSG00000002688.9	ENST00000331968.11	3507	18	254300	25075	254300	-25075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGGTAAGAAATCAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	50441459	50413088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_50413247_50430182_50430290_50431925_50431999_50433998_50434052_50435035_50435316_50436692_50436771_50438108_50438233_50439617_50439823_50441381
ENSMUSG00000002688.9_50435155_50474979_1	chr12	-	1112	8	ISM	ENSMUSG00000002688.9	ENST00000331968.11	3507	18	220780	47141	220780	-47141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCCCCAGTGGCATCG	NA	NA	NA	NA	NA	NA	NA	NA	50474979	50435154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_50435316_50436692_50436771_50438108_50438233_50439617_50439823_50441381_50441460_50441612_50441824_50472221_50472383_50474885
ENSMUSG00000002688.9_50438159_50695620_1	chr12	-	1122	8	ISM	ENSMUSG00000002688.9	ENST00000331968.11	3507	18	139	50145	139	-50145	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGATGAAGGAAGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	50695620	50438158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_50438233_50439617_50439823_50441381_50441460_50441612_50441824_50472221_50472383_50474885_50475018_50536685_50536825_50695498
ENSMUSG00000002718.15_166757100_166769762_1	chr2	+	1066	9	ISM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	9121	18547	0	-17951	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTATGGCAAAGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	166757099	166769762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632
ENSMUSG00000002718.15_166763890_166771907_1	chr2	+	1107	9	ISM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	15911	16402	6790	-15806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACATCTTTTCTTGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	166763889	166771907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704
ENSMUSG00000002718.15_166764133_166774077_1	chr2	+	1057	10	ISM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	16154	14232	7033	-13636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGGTATCAAATATATTA	NA	NA	NA	NA	NA	NA	NA	NA	166764132	166774077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052
ENSMUSG00000002718.15_166764707_166776711_1	chr2	+	1012	10	ISM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	16728	11598	7607	-11002	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTCACCTGGAGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	166764706	166776711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672
ENSMUSG00000002718.15_166769159_166777946_1	chr2	+	1053	9	ISM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	21180	10363	12059	-9767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGCCGTTTCCCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	166769158	166777946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842
ENSMUSG00000002718.15_166769450_166781631_1	chr2	+	1043	10	ISM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	21471	6678	12350	-6082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTGCTGTTGTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	166769449	166781631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554
ENSMUSG00000002718.15_166769688_166781887_1	chr2	+	1039	10	ISM	ENSMUSG00000002718.15	ENSMUST00000168599.8	2748	23	12588	5826	12588	-5826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCGTCTTCCTATATGG	NA	NA	NA	NA	NA	NA	NA	NA	166769687	166781887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829
ENSMUSG00000002718.15_166771736_166783170_1	chr2	+	1051	9	ISM	ENSMUSG00000002718.15	ENSMUST00000168599.8	2748	23	14636	4543	14636	-4543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCCAAGGCAAACGATCA	NA	NA	NA	NA	NA	NA	NA	NA	166771735	166783170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137
ENSMUSG00000002718.15_166772535_166783956_1	chr2	+	1019	10	ISM	ENSMUSG00000002718.15	ENSMUST00000168599.8	2748	23	15435	3757	15435	-3757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGCATTAAGTATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	166772534	166783956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934
ENSMUSG00000002718.15_166776675_166785126_1	chr2	+	1110	9	ISM	ENSMUSG00000002718.15	ENSMUST00000168599.8	2748	23	19575	2587	19575	-2587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATTCCTGCTGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	166776674	166785126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979
ENSMUSG00000002718.15_166777856_166786470_1	chr2	+	1136	9	ISM	ENSMUSG00000002718.15	ENSMUST00000168599.8	2748	23	20756	1243	20756	-1243	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAAATCCATCTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	166777855	166786470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296
ENSMUSG00000002718.15_166781651_166787776_1	chr2	+	1062	8	ISM	ENSMUSG00000002718.15	ENSMUST00000168599.8	2748	23	24551	-63	24551	63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGCCCTGCTGAAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	166781650	166787776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ENSMUSG00000002718.15_166781977_166788021_1	chr2	+	1105	7	ISM	ENSMUSG00000002718.15	ENSMUST00000168599.8	2748	23	24877	-308	24877	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATTTCTATTGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	166781976	166788021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ENSMUSG00000002718.15_166783944_166788309_1	chr2	+	1138	4	ISM	ENSMUSG00000002718.15	ENSMUST00000168599.8	2748	23	26844	-596	26844	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTTTTTATTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	166783943	166788309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166784017_166784979_166785127_166786296_166786529_166787623
ENSMUSG00000002728.15_145745161_145757551_2	chr2	+	472	5	ISM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	0	794	0	-794	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTACTACTCAGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	145745160	145757551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453
ENSMUSG00000002728.15_145745182_145757984_1	chr2	+	790	6	FSM	ENSMUSG00000002728.15	ENSMUST00000002805.14	1172	6	21	361	21	-361	multi-exon	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAACTGTTTGCCATAGTA	NA	NA	NA	NA	NA	NA	NA	NA	145745181	145757984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_145745283_145750510_145750536_145753592_145753714_145754312_145754449_145757453_145757600_145757723
ENSMUSG00000002728.15_145753620_145757827_1	chr2	+	450	4	ISM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	8459	518	8406	-518	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGGTGTTCCAGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	145753619	145757827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_145753684_145754312_145754449_145757453_145757600_145757723
ENSMUSG00000002728.15_145754395_145757962_1	chr2	+	439	3	ISM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	9234	383	9181	-383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGAGCAATAGCATACAT	NA	NA	NA	NA	NA	NA	NA	NA	145754394	145757962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_145754449_145757453_145757600_145757723
ENSMUSG00000002728.15_145757533_145758345_1	chr2	+	689	2	ISM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	12372	0	12319	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTAATCATCCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	145757532	145758345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_145757600_145757723
ENSMUSG00000002731.7_76460242_76477638_1	chr2	-	1390	7	ISM	ENSMUSG00000002731.7	ENSMUST00000002808.7	1614	8	721	0	579	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTAGCTTTATTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	76477638	76460241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76470664_76473566_76473649_76477468
ENSMUSG00000002731.7_76460242_76478216_1	chr2	-	1350	7	FSM	ENSMUSG00000002731.7	ENST00000677689.1	1352	7	1	1	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTAGCTTTATTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	76478216	76460241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76470664_76473517_76473649_76478135
ENSMUSG00000002731.7_76460242_76478216_2	chr2	-	1342	7	NNC	ENSMUSG00000002731.7	novel	1352	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTAGCTTTATTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	76478216	76460241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76470656_76473517_76473649_76478135
ENSMUSG00000002731.7_76460242_76478216_3	chr2	-	1349	7	NNC	ENSMUSG00000002731.7	novel	1614	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTAGCTTTATTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	76478216	76460241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76470664_76473518_76473649_76478135
ENSMUSG00000002731.7_76460242_76478216_4	chr2	-	1345	7	NNC	ENSMUSG00000002731.7	novel	1352	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTAGCTTTATTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	76478216	76460241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_76460913_76463876_76464052_76467138_76467229_76469543_76469662_76470584_76470664_76473517_76473649_76478135
ENSMUSG00000002731.7_76460242_76478216_5	chr2	-	1343	7	NNC	ENSMUSG00000002731.7	novel	1352	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTAGCTTTATTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	76478216	76460241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469655_76470584_76470664_76473517_76473649_76478135
ENSMUSG00000002731.7_76460242_76478216_6	chr2	-	1344	7	NNC	ENSMUSG00000002731.7	novel	1352	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTAGCTTTATTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	76478216	76460241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76470664_76473517_76473643_76478135
ENSMUSG00000002731.7_76460463_76478359_1	chr2	-	1393	8	FSM	ENSMUSG00000002731.7	ENSMUST00000002808.7	1614	8	0	221	0	-221	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGATAAAACAGCCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	76478359	76460462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76470664_76473566_76473649_76477468_76477639_76478135
ENSMUSG00000002731.7_76463897_76478205_1	chr2	-	517	5	ISM	ENSMUSG00000002731.7	ENST00000677981.1	1221	6	12	3656	12	-3655	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAACGTATTTGGATATAG	NA	NA	NA	NA	NA	NA	NA	NA	76478205	76463896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76464052_76467138_76467234_76469543_76469662_76470584_76470664_76478135
ENSMUSG00000002732.15_76493388_76503248_1	chr2	-	694	4	FSM	ENSMUSG00000002732.15	ENSMUST00000002809.14	860	4	166	0	111	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTTGCAAATCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	76503248	76493387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_76493697_76496020_76496155_76502040_76502193_76503149
ENSMUSG00000002732.15_76493388_76503414_2	chr2	-	854	4	NNC	ENSMUSG00000002732.15	novel	860	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2831	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTTGCAAATCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	76503414	76493387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_76493697_76496020_76496149_76502040_76502193_76503149
ENSMUSG00000002732.15_76493630_76503204_1	chr2	-	408	4	FSM	ENSMUSG00000002732.15	ENSMUST00000002809.14	860	4	210	242	155	-94	multi-exon	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTTGGAAGATATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	76503204	76493629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_76493697_76496020_76496155_76502040_76502193_76503149
ENSMUSG00000002741.10_5905844_5914623_1	chr11	+	579	6	ISM	ENSMUSG00000002741.10	ENSMUST00000002818.9	2541	7	151	3157	151	-3157	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGCTGGGAACACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	5905843	5914623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5906005_5909296_5909380_5911187_5911289_5912336_5912442_5912692_5912759_5914560
ENSMUSG00000002741.10_5909304_5916152_1	chr11	+	594	6	ISM	ENSMUSG00000002741.10	ENSMUST00000002818.9	2541	7	3611	1628	3611	-1628	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTCCCAAGAGGAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	5909303	5916152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5909380_5911187_5911289_5912336_5912442_5912692_5912759_5914560_5914663_5916008
ENSMUSG00000002741.10_5914612_5916530_1	chr11	+	573	2	ISM	ENSMUSG00000002741.10	ENSMUST00000002818.9	2541	7	8919	1250	8919	-1250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGTCACTGGGTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	5914611	5916530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5914663_5916008
ENSMUSG00000002748.8_135216270_135246188_1	chr5	+	1870	7	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	152	28795	152	-28795	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATTTGAAAAAGAAACGA	NA	NA	NA	NA	NA	NA	NA	NA	135216269	135246188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443
ENSMUSG00000002748.8_135216317_135246246_1	chr5	+	1881	7	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	199	28737	199	-28737	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGGAGAGAGAGAGAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	135216316	135246246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443
ENSMUSG00000002748.8_135216494_135246461_1	chr5	+	1919	7	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	376	28522	376	-28522	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAATGGAAGCCTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	135216493	135246461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443
ENSMUSG00000002748.8_135225348_135246568_1	chr5	+	1887	6	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	9230	28415	9230	-28415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAACTGGGAATGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	135225347	135246568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443
ENSMUSG00000002748.8_135227086_135246724_1	chr5	+	1887	5	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	10968	28259	10968	-28259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCAAGACGAATTTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	135227085	135246724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443
ENSMUSG00000002748.8_135239660_135250872_1	chr5	+	1899	3	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	23542	24111	23542	-24111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTCCAGGAAGGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	135239659	135250872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135239793_135245443_135247149_135250811
ENSMUSG00000002748.8_135239726_135250939_1	chr5	+	1900	3	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	23608	24044	23608	-24044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCATAACAGGTAAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	135239725	135250939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135239793_135245443_135247149_135250811
ENSMUSG00000002748.8_135245442_135252077_1	chr5	+	1985	3	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	29324	22906	29324	-22906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTGCTGCAGAGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135245441	135252077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135247149_135250811_135250951_135251938
ENSMUSG00000002748.8_135245610_135257396_1	chr5	+	1931	5	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	29492	17587	29492	-17587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGGAATTGGATGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	135245609	135257396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380
ENSMUSG00000002748.8_135245697_135257434_1	chr5	+	1882	5	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	29579	17549	29579	-17549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGGAATCAGGGAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	135245696	135257434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380
ENSMUSG00000002748.8_135245953_135260493_1	chr5	+	1889	7	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	29835	14490	29835	-14490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGCCCTTCAAGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	135245952	135260493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453
ENSMUSG00000002748.8_135246009_135260543_1	chr5	+	1883	7	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	29891	14440	29891	-14440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGCCTAAGCAGAAGAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	135246008	135260543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453
ENSMUSG00000002748.8_135246112_135265157_1	chr5	+	1902	8	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	29994	9826	29994	-9826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATCCGTGAAGCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	135246111	135265157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128
ENSMUSG00000002748.8_135246176_135265198_1	chr5	+	1879	8	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	30058	9785	30058	-9785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGGATGCTCGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	135246175	135265198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128
ENSMUSG00000002748.8_135246398_135268902_1	chr5	+	1905	10	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	30280	6081	30280	-6081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGGCAGCGAGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	135246397	135268902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880
ENSMUSG00000002748.8_135246681_135272734_1	chr5	+	1922	12	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	30563	2249	30563	-2249	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAAGTACCGCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	135246680	135272734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662
ENSMUSG00000002748.8_135246791_135273036_1	chr5	+	1921	13	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	30673	1947	30673	-1947	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGCTCATGCGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	135246790	135273036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ENSMUSG00000002748.8_135246863_135273085_1	chr5	+	1898	13	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	30745	1898	30745	-1898	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAGCAAGTGTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	135246862	135273085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ENSMUSG00000002748.8_135247042_135273301_1	chr5	+	1935	13	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	30924	1682	30924	-1682	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGACAGAAGAAGTAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	135247041	135273301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ENSMUSG00000002748.8_135250866_135273893_1	chr5	+	1883	13	ISM	ENSMUSG00000002748.8	ENST00000339594.9	6011	20	34748	1092	34748	-1090	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGAGTAGAGGGACATTT	NA	NA	NA	NA	NA	NA	NA	NA	135250865	135273893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959_135273333_135273815
ENSMUSG00000002748.8_135250913_135273948_1	chr5	+	1891	13	ISM	ENSMUSG00000002748.8	ENST00000339594.9	6011	20	34795	1037	34795	-1035	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCCCCGCCCTCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	135250912	135273948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959_135273333_135273815
ENSMUSG00000002748.8_135252032_135274077_1	chr5	+	1889	12	ISM	ENSMUSG00000002748.8	ENST00000339594.9	6011	20	35914	908	35914	-906	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGCCCAGCCCACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	135252031	135274077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959_135273333_135273815
ENSMUSG00000002748.8_135255449_135274203_1	chr5	+	1889	11	ISM	ENSMUSG00000002748.8	ENST00000339594.9	6011	20	39331	782	39331	-780	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATTGTATAAAGAACATC	NA	NA	NA	NA	NA	NA	NA	NA	135255448	135274203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959_135273333_135273815
ENSMUSG00000002748.8_135259025_135274360_1	chr5	+	1915	9	ISM	ENSMUSG00000002748.8	ENST00000339594.9	6011	20	42907	625	42907	-623	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACCTGTGGGTGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	135259024	135274360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959_135273333_135273815
ENSMUSG00000002748.8_135259072_135274414_1	chr5	+	1922	9	ISM	ENSMUSG00000002748.8	ENST00000339594.9	6011	20	42954	571	42954	-569	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGAGGGCTTCTAGCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	135259071	135274414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959_135273333_135273815
ENSMUSG00000002748.8_135259153_135274466_1	chr5	+	1893	9	ISM	ENSMUSG00000002748.8	ENST00000339594.9	6011	20	43035	519	43035	-517	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGTAGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	135259152	135274466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959_135273333_135273815
ENSMUSG00000002748.8_135260556_135274597_1	chr5	+	1886	8	ISM	ENSMUSG00000002748.8	ENST00000339594.9	6011	20	44438	388	44438	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAAATGTGAGTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	135260555	135274597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959_135273333_135273815
ENSMUSG00000002748.8_135265167_135274708_1	chr5	+	1878	7	ISM	ENSMUSG00000002748.8	ENST00000339594.9	6011	20	49049	277	49049	-275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGGCTGAGGAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	135265166	135274708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959_135273333_135273815
ENSMUSG00000002748.8_135265215_135274785_1	chr5	+	1907	7	ISM	ENSMUSG00000002748.8	ENST00000339594.9	6011	20	49097	200	49097	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTGGCACTGCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	135265214	135274785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959_135273333_135273815
ENSMUSG00000002748.8_135266838_135274983_1	chr5	+	1978	6	ISM	ENSMUSG00000002748.8	ENST00000339594.9	6011	20	50720	2	50720	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAGCTTTGATGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	135266837	135274983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959_135273333_135273815
ENSMUSG00000002748.8_135266894_135274983_1	chr5	+	1922	6	ISM	ENSMUSG00000002748.8	ENST00000339594.9	6011	20	50776	2	50776	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAGCTTTGATGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	135266893	135274983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959_135273333_135273815
ENSMUSG00000002763.17_47022595_47036467_1	chr17	+	2994	17	FSM	ENSMUSG00000002763.17	ENSMUST00000002840.9	3200	17	206	0	206	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTGTGAGAGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	47022594	47036467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034662_47034844_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ENSMUSG00000002767.14_46957196_46959441_1	chr17	+	484	4	ISM	ENSMUSG00000002767.14	ENSMUST00000113429.8	998	7	20	1616	0	-1604	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCATTGCCACGGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	46957195	46959441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397
ENSMUSG00000002767.14_46957196_46960924_1	chr17	+	845	7	FSM	ENSMUSG00000002767.14	ENSMUST00000113429.8	998	7	20	133	0	-121	multi-exon	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCAACGCAAGGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	46957195	46960924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959595_46959696_46959960_46960035_46960809
ENSMUSG00000002767.14_46958324_46961058_1	chr17	+	842	6	ISM	ENSMUSG00000002767.14	ENSMUST00000113429.8	998	7	1148	-1	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	46958323	46961058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46958485_46959162_46959305_46959397_46959514_46959595_46959696_46959960_46960035_46960809
ENSMUSG00000002767.14_46958324_46961058_2	chr17	+	408	2	NNC	ENSMUSG00000002767.14	novel	397	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	46958323	46961058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_46958485_46960811
ENSMUSG00000002767.14_46958391_46959670_1	chr17	+	438	4	ISM	ENSMUSG00000002767.14	ENSMUST00000113430.2	991	7	1195	1395	67	-1375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCCAGTATATCCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	46958390	46959670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46958485_46959162_46959305_46959397_46959514_46959584
ENSMUSG00000002767.14_46958406_46959658_1	chr17	+	411	4	ISM	ENSMUSG00000002767.14	ENSMUST00000113430.2	991	7	1210	1407	82	-1387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGCCGGGGAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	46958405	46959658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46958485_46959162_46959305_46959397_46959514_46959584
ENSMUSG00000002767.14_46958445_46959983_1	chr17	+	432	5	ISM	ENSMUSG00000002767.14	ENSMUST00000113430.2	991	7	1249	1082	121	-1062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGAACGGGACAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	46958444	46959983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960
ENSMUSG00000002767.14_46959241_46960924_1	chr17	+	480	5	ISM	ENSMUSG00000002767.14	ENSMUST00000113430.2	991	7	2045	141	917	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCAACGCAAGGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	46959240	46960924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46959305_46959397_46959514_46959584_46959696_46959960_46960035_46960809
ENSMUSG00000002767.14_46959583_46961058_1	chr17	+	436	3	ISM	ENSMUSG00000002767.14	ENSMUST00000113430.2	991	7	2387	7	1259	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	46959582	46961058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46959696_46959960_46960035_46960809
ENSMUSG00000002768.9_46991912_46993900_1	chr17	+	645	4	FSM	ENSMUSG00000002768.9	ENST00000642748.1	1035	4	215	175	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCGACTCAGACCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	46991911	46993900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_46991917_46992542_46992824_46992934_46993038_46993644
ENSMUSG00000002768.9_46992050_46993900_1	chr17	+	679	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233430.2	945	4	138	128	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCGACTCAGACCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	46992049	46993900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_46992089_46992542_46992824_46992934_46993038_46993644
ENSMUSG00000002768.9_46992050_46993900_2	chr17	+	722	4	FSM	ENSMUSG00000002768.9	ENSMUST00000002845.8	859	4	0	137	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCGACTCAGACCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	46992049	46993900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_46992132_46992542_46992824_46992934_46993038_46993644
ENSMUSG00000002768.9_46992647_46994028_1	chr17	+	664	3	ISM	ENSMUSG00000002768.9	ENSMUST00000002845.8	859	4	597	9	541	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCACACCGCCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	46992646	46994028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46992824_46992934_46993038_46993644
ENSMUSG00000002768.9_46992701_46994028_1	chr17	+	610	3	ISM	ENSMUSG00000002768.9	ENSMUST00000002845.8	859	4	651	9	595	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCACACCGCCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	46992700	46994028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46992824_46992934_46993038_46993644
ENSMUSG00000002778.15_45522311_45532976_1	chr7	+	1304	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	115	180	62	-177	multi-exon	TRUE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGAGGGGAGGGTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	45522310	45532976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
ENSMUSG00000002778.15_45522311_45533036_1	chr7	+	1364	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	115	120	62	-117	multi-exon	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGAGGCTGGCTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	45522310	45533036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
ENSMUSG00000002778.15_45522426_45533156_1	chr7	+	1369	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	230	0	-125	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTCCCTGCCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	45522425	45533156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
ENSMUSG00000002799.7_112871692_112872120_1	chr12	-	320	2	ISM	ENSMUSG00000002799.7	ENST00000331782.8	5080	26	21317	291	21276	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCCAGAGATCTCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	112872120	112871691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112871924_112872032
ENSMUSG00000002799.7_112871820_112872242_1	chr12	-	314	2	ISM	ENSMUSG00000002799.7	ENST00000331782.8	5080	26	21195	419	21154	-381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGTGGCGCCTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	112872242	112871819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112871924_112872032
ENSMUSG00000002799.7_112871850_112878898_1	chr12	-	2777	15	ISM	ENSMUSG00000002799.7	ENST00000331782.8	5080	26	14539	449	14498	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGCCCGTGTGATGCCG	NA	NA	NA	NA	NA	NA	NA	NA	112878898	112871849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112871924_112872032_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876267_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817
ENSMUSG00000002799.7_112872192_112879295_1	chr12	-	2755	16	ISM	ENSMUSG00000002799.7	ENST00000331782.8	5080	26	14142	791	14101	-753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACAGGCCGTCGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	112879295	112872191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876267_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224
ENSMUSG00000002799.7_112872755_112883735_1	chr12	-	2758	21	ISM	ENSMUSG00000002799.7	ENST00000331782.8	5080	26	9702	1354	9661	-1316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGCAGGGCAGGCGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	112883735	112872754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876267_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691
ENSMUSG00000002799.7_112872897_112883905_1	chr12	-	2688	22	ISM	ENSMUSG00000002799.7	ENST00000331782.8	5080	26	9532	1496	9491	-1458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCACGGGATGAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	112883905	112872896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876267_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850
ENSMUSG00000002799.7_112872897_112883967_1	chr12	-	2750	22	ISM	ENSMUSG00000002799.7	ENST00000331782.8	5080	26	9470	1496	9429	-1458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCACGGGATGAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	112883967	112872896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876267_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850
ENSMUSG00000002799.7_112872897_112884032_1	chr12	-	2815	22	ISM	ENSMUSG00000002799.7	ENST00000331782.8	5080	26	9405	1496	9364	-1458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCACGGGATGAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	112884032	112872896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876267_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850
ENSMUSG00000002799.7_112874075_112892621_1	chr12	-	2786	22	ISM	ENSMUSG00000002799.7	ENST00000331782.8	5080	26	816	2674	775	-2636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGCTGTGGTGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	112892621	112874074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876267_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501
ENSMUSG00000002799.7_112874780_112892813_1	chr12	-	2756	21	ISM	ENSMUSG00000002799.7	ENST00000331782.8	5080	26	624	3379	583	-3341	internal_fragment	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTGCCACCCAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	112892813	112874779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112874928_112875322_112875439_112875528_112875643_112876148_112876267_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501
ENSMUSG00000002799.7_112875561_112893396_1	chr12	-	2857	20	ISM	ENSMUSG00000002799.7	ENST00000331782.8	5080	26	41	4160	0	-4122	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGTCGTTCTGGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	112893396	112875560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112875643_112876148_112876267_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501_112892853_112893038
ENSMUSG00000002799.7_112878909_112880028_1	chr12	-	319	4	ISM	ENSMUSG00000002799.7	ENST00000347004.2	5014	25	13457	7508	13368	-7470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCCTGCCGCCGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	112880028	112878908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112878992_112879090_112879138_112879499_112879614_112879953
ENSMUSG00000002799.7_112884010_112892666_1	chr12	-	316	3	ISM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	730	12571	730	-12571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTGCAGATCCGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	112892666	112884009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112884103_112885619_112885678_112892501
ENSMUSG00000002803.15_112940241_112942073_1	chr12	+	1522	4	FSM	ENSMUSG00000002803.15	ENSMUST00000002880.7	2057	4	58	477	0	-477	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTTCCAGTGCTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	112940240	112942073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_112940603_112940678_112940770_112940872_112940992_112941123
ENSMUSG00000002803.15_112940445_112942238_1	chr12	+	1483	4	FSM	ENSMUSG00000002803.15	ENSMUST00000002880.7	2057	4	262	312	204	-312	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCTGCCTTACTGATAC	NA	NA	NA	NA	NA	NA	NA	NA	112940444	112942238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_112940603_112940678_112940770_112940872_112940992_112941123
ENSMUSG00000002803.15_112940445_112942326_1	chr12	+	1571	4	FSM	ENSMUSG00000002803.15	ENSMUST00000002880.7	2057	4	262	224	204	-224	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAGACAGCATTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	112940444	112942326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_112940603_112940678_112940770_112940872_112940992_112941123
ENSMUSG00000002803.15_112940706_112942550_1	chr12	+	1610	3	ISM	ENSMUSG00000002803.15	ENSMUST00000002880.7	2057	4	523	0	465	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAACAAGAACCAAATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	112940705	112942550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_112940770_112940872_112940992_112941123
ENSMUSG00000002804.5_112897911_112902112_1	chr12	-	897	2	ISM	ENSMUSG00000002804.5	ENSMUST00000221397.2	1241	5	3632	0	3618	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATGCGTAACATGAACT	NA	NA	NA	NA	NA	NA	NA	NA	112902112	112897910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112898671_112901975
ENSMUSG00000002804.5_112897911_112902217_1	chr12	-	1002	2	ISM	ENSMUSG00000002804.5	ENSMUST00000221397.2	1241	5	3527	0	3513	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATGCGTAACATGAACT	NA	NA	NA	NA	NA	NA	NA	NA	112902217	112897910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112898671_112901975
ENSMUSG00000002804.5_112898094_112905731_1	chr12	-	1045	5	FSM	ENSMUSG00000002804.5	ENSMUST00000221397.2	1241	5	13	183	-1	-183	multi-exon	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCCGGATGGAAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	112905731	112898093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_112898671_112901975_112902214_112902414_112902480_112902898_112902943_112905610
ENSMUSG00000002804.5_112902018_112905707_1	chr12	-	366	4	ISM	ENSMUSG00000002804.5	ENSMUST00000002881.5	734	5	30	3643	23	-3473	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCCTGGTCCCCACCGATC	NA	NA	NA	NA	NA	NA	NA	NA	112905707	112902017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112902178_112902414_112902480_112902898_112902943_112905610
ENSMUSG00000002808.8_19775876_19803790_1	chr13	-	2179	3	FSM	ENSMUSG00000002808.8	ENSMUST00000002885.8	2363	3	184	0	168	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAGCCTATTAAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	19803790	19775875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_19777519_19778616_19778826_19803463
ENSMUSG00000002812.5_60604969_60609117_1	chr11	-	1968	13	ISM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	8972	0	6974	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTTTTAATATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	60609117	60604968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945
ENSMUSG00000002812.5_60605227_60609893_1	chr11	-	1912	16	ISM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	8196	258	6198	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCGCCTGGTCCGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	60609893	60605226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850
ENSMUSG00000002812.5_60605412_60610548_1	chr11	-	1938	16	ISM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	7541	443	5543	-274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATTACTGAAGCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	60610548	60605411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518
ENSMUSG00000002812.5_60606172_60610967_1	chr11	-	1987	15	ISM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	7122	1203	5124	-1034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGTGCACAGAAACCCTA	NA	NA	NA	NA	NA	NA	NA	NA	60610967	60606171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831
ENSMUSG00000002812.5_60606491_60611221_1	chr11	-	1926	14	ISM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	6868	1522	4870	-1353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCTGTGGGCAGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	60611221	60606490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186
ENSMUSG00000002812.5_60606626_60611323_1	chr11	-	1969	13	ISM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	6766	1657	4768	-1488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACCTGGCTTGGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	60611323	60606625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186
ENSMUSG00000002812.5_60606745_60611507_1	chr11	-	1894	14	ISM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	6582	1776	4584	-1607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATCCCATTTCAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	60611507	60606744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463
ENSMUSG00000002812.5_60606916_60611611_1	chr11	-	1961	13	ISM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	6478	1947	4480	-1778	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTCACACAAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	60611611	60606915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463
ENSMUSG00000002812.5_60607118_60612322_1	chr11	-	1894	15	ISM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	5767	2149	3769	-1980	internal_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAAGGAGGGGAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	60612322	60607117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272
ENSMUSG00000002812.5_60607321_60612531_1	chr11	-	1895	15	ISM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	5558	2352	3560	-2183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGCTGGAGGGCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	60612531	60607320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507
ENSMUSG00000002812.5_60607480_60612683_1	chr11	-	1998	14	ISM	ENSMUSG00000002812.5	ENST00000579294.5	3751	29	3408	2342	3408	-2342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGGCCTCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	60612683	60607479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507
ENSMUSG00000002812.5_60607627_60613168_1	chr11	-	1899	15	ISM	ENSMUSG00000002812.5	ENST00000579294.5	3751	29	2923	2489	2923	-2489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACTACACACGGAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	60613168	60607626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120
ENSMUSG00000002812.5_60608041_60613433_1	chr11	-	1857	15	ISM	ENSMUSG00000002812.5	ENST00000579294.5	3751	29	2658	2903	2658	-2903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGGAGCTATGTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	60613433	60608040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410
ENSMUSG00000002812.5_60608130_60613556_1	chr11	-	1891	15	ISM	ENSMUSG00000002812.5	ENST00000579294.5	3751	29	2535	2992	2535	-2992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGTACATCCTGGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	60613556	60608129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410
ENSMUSG00000002812.5_60608235_60613911_1	chr11	-	1968	15	ISM	ENSMUSG00000002812.5	ENST00000579294.5	3751	29	2180	3097	2180	-3097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGATGGAGGAGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	60613911	60608234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825
ENSMUSG00000002812.5_60609079_60616020_1	chr11	-	1920	17	ISM	ENSMUSG00000002812.5	ENST00000579294.5	3751	29	71	3941	71	-3941	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCGGAAATCACACTCC	NA	NA	NA	NA	NA	NA	NA	NA	60616020	60609078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983
ENSMUSG00000002812.5_60609670_60618049_1	chr11	-	1970	16	ISM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	40	4701	40	-4532	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCCCTGGTACTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	60618049	60609669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ENSMUSG00000002820.7_21176820_21184159_1	chr9	+	1154	9	ISM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	231	4909	231	-4909	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAACAGGAAGGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	21176819	21184159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086
ENSMUSG00000002820.7_21178242_21184792_1	chr9	+	1127	8	ISM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	1653	4276	1653	-4276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATCTGCAACTCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	21178241	21184792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ENSMUSG00000002820.7_21179644_21185041_1	chr9	+	1144	7	ISM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	3055	4027	3055	-4027	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCCTGGCGTTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	21179643	21185041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ENSMUSG00000002820.7_21182063_21185336_1	chr9	+	1147	5	ISM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	5474	3732	5474	-3732	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGGACCCAGCAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	21182062	21185336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ENSMUSG00000002825.9_21323198_21329615_1	chr9	+	635	6	ISM	ENSMUSG00000002825.9	ENSMUST00000002902.8	1316	10	65	1955	65	-1955	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTCTGAGTGGAGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	21323197	21329615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579
ENSMUSG00000002825.9_21323343_21329718_1	chr9	+	593	6	ISM	ENSMUSG00000002825.9	ENSMUST00000002902.8	1316	10	210	1852	210	-1852	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTGGGGTGGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	21323342	21329718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579
ENSMUSG00000002825.9_21323528_21330662_1	chr9	+	619	6	ISM	ENSMUSG00000002825.9	ENSMUST00000002902.8	1316	10	395	908	395	-908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCCGCCCCAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	21323527	21330662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586
ENSMUSG00000002825.9_21323757_21331001_1	chr9	+	672	7	ISM	ENSMUSG00000002825.9	ENSMUST00000002902.8	1316	10	624	569	624	-569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCAGGTGACCTGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	21323756	21331001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920
ENSMUSG00000002825.9_21329578_21331570_1	chr9	+	654	5	ISM	ENSMUSG00000002825.9	ENSMUST00000002902.8	1316	10	6445	0	6445	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGCTCTTGTGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	21329577	21331570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
ENSMUSG00000002833.12_56386699_56404490_1	chr17	+	1225	9	ISM	ENSMUSG00000002833.12	ENST00000621835.4	1784	14	-25	1883	0	-1883	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGACTCAGAACCTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	56386698	56404490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404157_56404234
ENSMUSG00000002833.12_56386699_56406291_1	chr17	+	1761	14	ISM	ENSMUSG00000002833.12	ENSMUST00000225843.2	2238	16	0	1307	0	-82	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGCCGAGAAGGAACGG	NA	NA	NA	NA	NA	NA	NA	NA	56386698	56406291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176
ENSMUSG00000002833.12_56386699_56406342_1	chr17	+	1812	14	ISM	ENSMUSG00000002833.12	ENSMUST00000225843.2	2238	16	0	1256	0	-31	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCAGGCTCCCAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	56386698	56406342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176
ENSMUSG00000002833.12_56389099_56404986_1	chr17	+	1239	9	ISM	ENSMUSG00000002833.12	ENST00000621835.4	1784	14	2375	1387	2375	-1387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCATCTGTCCTGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	56389098	56404986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404157_56404234_56404527_56404881
ENSMUSG00000002833.12_56389099_56406985_1	chr17	+	1857	14	ISM	ENSMUSG00000002833.12	ENSMUST00000225843.2	2238	16	2400	613	2375	-607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	993	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCCCTGGGACATCAG	NA	NA	NA	NA	NA	NA	NA	NA	56389098	56406985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858
ENSMUSG00000002833.12_56389355_56405754_1	chr17	+	1228	10	ISM	ENSMUSG00000002833.12	ENST00000621835.4	1784	14	2631	619	2631	-619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACACCTGCTGCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	56389354	56405754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404157_56404234_56404527_56404881_56404986_56405483_56405558_56405682
ENSMUSG00000002833.12_56389355_56407382_1	chr17	+	1739	14	ISM	ENSMUSG00000002833.12	ENSMUST00000225843.2	2238	16	2656	216	2631	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	893	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGCGTCAGGACCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	56389354	56407382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ENSMUSG00000002833.12_56400521_56406075_1	chr17	+	1269	10	ISM	ENSMUSG00000002833.12	ENST00000621835.4	1784	14	13797	298	13797	-298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCATGGGCAAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	56400520	56406075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404157_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973
ENSMUSG00000002833.12_56400702_56406305_1	chr17	+	1217	11	ISM	ENSMUSG00000002833.12	ENST00000621835.4	1784	14	13978	68	13978	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGGGCCGATAACGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	56400701	56406305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404157_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176
ENSMUSG00000002833.12_56400702_56407607_1	chr17	+	1723	13	ISM	ENSMUSG00000002833.12	ENSMUST00000225843.2	2238	16	14003	-9	13978	9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	809	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTATTGGCTTAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	56400701	56407607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ENSMUSG00000002833.12_56403015_56406305_1	chr17	+	1198	10	ISM	ENSMUSG00000002833.12	ENST00000621835.4	1784	14	16291	68	16291	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGGGCCGATAACGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	56403014	56406305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56403131_56403204_56403277_56403847_56404017_56404087_56404157_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176
ENSMUSG00000002835.10_56347439_56372154_1	chr17	+	2394	13	ISM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	0	5122	0	-5122	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCTGAGAACTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	56347438	56372154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973
ENSMUSG00000002835.10_56354093_56374550_1	chr17	+	2375	12	ISM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	6654	2726	6654	-2726	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTGTCAAGTTGAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	56354092	56374550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ENSMUSG00000002835.10_56354200_56374613_1	chr17	+	2331	12	ISM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	6761	2663	6761	-2663	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCTGAAGTGCAAGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	56354199	56374613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ENSMUSG00000002835.10_56363423_56375055_1	chr17	+	2336	11	ISM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	15984	2221	15984	-2221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACACTGGTGCATGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	56363422	56375055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ENSMUSG00000002835.10_56364863_56375267_1	chr17	+	2348	10	ISM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	17424	2009	17424	-2009	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGGTTTATAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	56364862	56375267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ENSMUSG00000002835.10_56369587_56375832_1	chr17	+	2441	6	ISM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	22148	1444	22148	-1444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTAATAAACCCACCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	56369586	56375832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ENSMUSG00000002835.10_56369626_56375832_1	chr17	+	2402	6	ISM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	22187	1444	22187	-1444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTAATAAACCCACCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	56369625	56375832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ENSMUSG00000002835.10_56372107_56376440_1	chr17	+	2353	2	ISM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	24668	836	24668	-836	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAGGGGAGTTCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	56372106	56376440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56372426_56374406
ENSMUSG00000002835.10_56372243_56376548_1	chr17	+	2325	2	ISM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	24804	728	24804	-728	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGCCAGGTTCTGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	56372242	56376548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56372426_56374406
ENSMUSG00000002844.10_38265377_38267896_1	chr16	-	1377	2	ISM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	5169	985	5169	-985	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGGTGCGGGTTCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	38267896	38265376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38266467_38267609
ENSMUSG00000002844.10_38265638_38270647_1	chr16	-	1347	3	ISM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	2418	1246	2418	-1246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGGGTGTGTCAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	38270647	38265637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38266467_38267609_38267971_38270490
ENSMUSG00000002844.10_38265775_38270799_1	chr16	-	1362	3	ISM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	2266	1383	2266	-1383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAAAATGCTTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	38270799	38265774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38266467_38267609_38267971_38270490
ENSMUSG00000002844.10_38265886_38273044_1	chr16	-	1451	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	21	1494	21	-1494	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTTCCTCTCTTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	38273044	38265885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
ENSMUSG00000002844.10_38265935_38273044_1	chr16	-	1402	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	21	1543	21	-1543	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTGGATGCGTTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	38273044	38265934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
ENSMUSG00000002844.10_38265980_38273065_1	chr16	-	1378	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	0	1588	0	-1588	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGAATCCTAATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	38273065	38265979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
ENSMUSG00000002845.15_38383248_38406660_1	chr16	+	1315	7	ISM	ENSMUSG00000002845.15	ENSMUST00000002924.15	2871	9	74	5864	74	-4892	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCAACTGCTGCCATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	38383247	38406660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582
ENSMUSG00000002845.15_38384551_38411395_1	chr16	+	1349	8	ISM	ENSMUSG00000002845.15	ENSMUST00000002924.15	2871	9	1377	1129	1377	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATCCTTTTCTGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	38384550	38411395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUSG00000002845.15_38393413_38411507_1	chr16	+	1351	7	ISM	ENSMUSG00000002845.15	ENSMUST00000002924.15	2871	9	10239	1017	10239	-45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCTCTCAACAGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	38393412	38411507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUSG00000002845.15_38393413_38412525_1	chr16	+	2165	7	ISM	ENSMUSG00000002845.15	ENSMUST00000171687.8	2667	9	10239	-1	10239	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCTATTTGTGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	38393412	38412525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUSG00000002845.15_38396127_38411668_1	chr16	+	1264	6	ISM	ENSMUSG00000002845.15	ENSMUST00000002924.15	2871	9	12953	856	12953	116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTATCTTTCATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	38396126	38411668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUSG00000002845.15_38402330_38411804_1	chr16	+	1340	5	ISM	ENSMUSG00000002845.15	ENSMUST00000002924.15	2871	9	19156	720	19156	252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTCCTTTTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	38402329	38411804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUSG00000002845.15_38405566_38411931_1	chr16	+	1282	4	ISM	ENSMUSG00000002845.15	ENSMUST00000171687.8	2667	9	22392	593	22392	379	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGCAGAGGGAGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	38405565	38411931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUSG00000002845.15_38408545_38412525_1	chr16	+	1377	2	NNC	ENSMUSG00000002845.15	novel	2667	9	NA	NA	25371	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCTATTTGTGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	38408544	38412525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_38408670_38411273
ENSMUSG00000002846.10_38318709_38325852_1	chr16	-	927	3	ISM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	17173	0	17173	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTGTCTGGATCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	38325852	38318708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38319446_38322923_38323035_38325773
ENSMUSG00000002846.10_38318864_38331097_1	chr16	-	857	5	ISM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	11928	155	11928	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGTGCACCCACA	NA	NA	NA	NA	NA	NA	NA	NA	38331097	38318863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080
ENSMUSG00000002846.10_38318926_38331137_1	chr16	-	835	5	ISM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	11888	217	11888	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGGAGGCTGAGAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	38331137	38318925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080
ENSMUSG00000002846.10_38319009_38331169_1	chr16	-	784	5	ISM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	11856	300	11856	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACATGGCTTCCGATCT	NA	NA	NA	NA	NA	NA	NA	NA	38331169	38319008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080
ENSMUSG00000002846.10_38319111_38338894_1	chr16	-	848	6	ISM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	4131	402	4131	-402	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGCCCTGGCTGTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	38338894	38319110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728
ENSMUSG00000002846.10_38319212_38342792_1	chr16	-	837	7	FSM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	233	503	233	-503	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGCTAGCGGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	38342792	38319211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342702
ENSMUSG00000002846.10_38319287_38342877_1	chr16	-	847	7	FSM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	148	578	148	-578	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGTGTCTGGGAACGCC	NA	NA	NA	NA	NA	NA	NA	NA	38342877	38319286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342702
ENSMUSG00000002846.10_38319354_38343003_1	chr16	-	906	7	FSM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	22	645	22	-645	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCTGCTAAGCCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	38343003	38319353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342702
ENSMUSG00000002847.8_38216607_38227969_1	chr16	-	671	5	ISM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	25538	128	9657	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCCTTTTAGCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	38227969	38216606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953
ENSMUSG00000002847.8_38216664_38228036_1	chr16	-	681	5	ISM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	25471	185	9590	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGACTCATGTTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	38228036	38216663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953
ENSMUSG00000002847.8_38216794_38230046_1	chr16	-	726	6	ISM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	23461	315	7580	-315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGCCGCAGTTTTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	38230046	38216793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953_38228122_38229956
ENSMUSG00000002847.8_38217807_38235193_1	chr16	-	681	7	ISM	ENSMUSG00000002847.8	ENST00000495992.5	1168	9	2433	106	2433	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCAAGTGAAGCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	38235193	38217806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38217866_38221237_38221347_38225898_38225989_38227953_38228122_38229956_38230047_38232447_38232550_38235130
ENSMUSG00000002847.8_38221269_38235788_1	chr16	-	698	7	ISM	ENSMUSG00000002847.8	ENST00000495992.5	1168	9	1838	3568	1838	-3568	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACGTAACGTCCTCGGTC	NA	NA	NA	NA	NA	NA	NA	NA	38235788	38221268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38221347_38225898_38225989_38227953_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235727
ENSMUSG00000002847.8_38225899_38235857_1	chr16	-	737	6	ISM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	17650	9420	1769	-8198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTAGGGAGGAAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	38235857	38225898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38225989_38227953_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235679
ENSMUSG00000002847.8_38227979_38237475_1	chr16	-	676	6	ISM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	16032	11500	151	-10278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCTCTCCTGTCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	38237475	38227978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235679_38235858_38237421
ENSMUSG00000002847.8_38228016_38237569_1	chr16	-	685	6	ISM	ENSMUSG00000002847.8	ENST00000495992.5	1168	9	57	10315	57	-10315	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTCGCAGGAGACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	38237569	38228015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235727_38235858_38237421
ENSMUSG00000002847.8_38228048_38237547_1	chr16	-	679	6	ISM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	15960	11569	79	-10347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGGCCTTCCCCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	38237547	38228047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235679_38235858_38237421
ENSMUSG00000002847.8_38232498_38253301_1	chr16	-	677	5	ISM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	206	16019	206	-14797	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGCTGGAGACGCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	38253301	38232497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38232550_38235130_38235240_38235679_38235858_38237421_38237624_38253165
ENSMUSG00000002870.9_88860456_88861846_1	chr6	-	976	3	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	13916	0	13916	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	88861846	88860455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88861093_88861357_88861514_88861663
ENSMUSG00000002870.9_88860905_88864526_1	chr6	-	936	6	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	11236	449	11236	-449	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGGTGCCCTGTAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	88864526	88860904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482
ENSMUSG00000002870.9_88861057_88864755_1	chr6	-	921	7	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	11007	601	11007	-601	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGACAGCGACCTCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	88864755	88861056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701
ENSMUSG00000002870.9_88861411_88864898_1	chr6	-	975	6	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	10864	955	10864	-955	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGCCCAGCAGGACACC	NA	NA	NA	NA	NA	NA	NA	NA	88864898	88861410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701
ENSMUSG00000002870.9_88861664_88865247_1	chr6	-	1020	6	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	10515	1208	10515	-1208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGTGTATGGCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	88865247	88861663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153
ENSMUSG00000002870.9_88861802_88866048_1	chr6	-	935	7	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	9714	1346	9714	-1346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGCATGGCCGAGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	88866048	88861801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995
ENSMUSG00000002870.9_88862825_88866187_1	chr6	-	1030	6	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	9575	2369	9575	-2369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAGTGGGACCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	88866187	88862824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995
ENSMUSG00000002870.9_88862939_88866785_1	chr6	-	932	7	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	8977	2483	8977	-2483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGCTGAAGAAGTATATC	NA	NA	NA	NA	NA	NA	NA	NA	88866785	88862938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769
ENSMUSG00000002870.9_88862995_88866838_1	chr6	-	929	7	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	8924	2539	8924	-2539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCACCTTGGAGCCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	88866838	88862994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769
ENSMUSG00000002870.9_88863048_88866890_1	chr6	-	928	7	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	8872	2592	8872	-2592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACGTCAGACACCACCC	NA	NA	NA	NA	NA	NA	NA	NA	88866890	88863047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769
ENSMUSG00000002870.9_88863983_88868728_1	chr6	-	946	7	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	7034	3527	7034	-3527	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTGTGTGGTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	88868728	88863982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654
ENSMUSG00000002870.9_88864042_88868786_1	chr6	-	945	7	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	6976	3586	6976	-3586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCACTGACCTTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	88868786	88864041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654
ENSMUSG00000002870.9_88864482_88868897_1	chr6	-	1043	6	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	6865	4026	6865	-4026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTGCTGTAGTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	88868897	88864481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654
ENSMUSG00000002870.9_88864594_88869001_1	chr6	-	940	7	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	6761	4138	6761	-4138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCAGCATCCACGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	88869001	88864593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957
ENSMUSG00000002870.9_88864766_88869068_1	chr6	-	927	6	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	6694	4310	6694	-4310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGAGGCGGGAGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	88869068	88864765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957
ENSMUSG00000002870.9_88864916_88869969_1	chr6	-	929	7	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	5793	4460	5793	-4460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGGGACCCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	88869969	88864915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926
ENSMUSG00000002870.9_88865996_88870187_1	chr6	-	1016	5	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	5575	5540	5575	-5540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGGCTGGGATCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	88870187	88865995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926
ENSMUSG00000002870.9_88866138_88870389_1	chr6	-	944	6	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	5373	5682	5373	-5682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGGCTTTCCAGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	88870389	88866137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319
ENSMUSG00000002870.9_88866864_88874313_1	chr6	-	951	6	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	1449	6408	1449	-6408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGGCAAGGTGGCGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	88874313	88866863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268
ENSMUSG00000002870.9_88868845_88875694_1	chr6	-	973	6	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	68	8389	68	-8389	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATCCGTACCAGTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	88875694	88868844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ENSMUSG00000002881.15_52496453_52539459_1	chr1	-	3495	8	FSM	ENSMUSG00000002881.15	ENSMUST00000069792.14	3874	8	379	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGCTTAGAGTGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	52539459	52496452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_52498466_52501246_52501364_52503943_52504107_52506048_52506139_52518396_52518449_52520029_52520164_52529079_52529915_52539368
ENSMUSG00000002885.15_84449880_84452528_1	chr8	-	1539	8	ISM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	15270	-111	15270	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAAGCTTTGGAACAATA	NA	NA	NA	NA	NA	NA	NA	NA	84452528	84449879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493
ENSMUSG00000002885.15_84451533_84460718_1	chr8	-	1456	11	ISM	ENSMUSG00000002885.15	ENSMUST00000166939.8	2980	18	7237	1653	7080	-1540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGGTGCGTGTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	84460718	84451532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84460042_84460196_84460637
ENSMUSG00000002885.15_84451855_84467802_1	chr8	-	1450	12	ISM	ENSMUSG00000002885.15	ENSMUST00000002964.14	2986	18	153	1975	0	-1862	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACCTGTGCATCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	84467802	84451854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ENSMUSG00000002885.15_84452500_84467955_1	chr8	-	1476	11	ISM	ENSMUSG00000002885.15	ENSMUST00000002964.14	2986	18	0	2620	0	-2507	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGGTAAGCGGTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	84467955	84452499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ENSMUSG00000002910.12_71289502_71289811_1	chr8	-	221	2	ISM	ENSMUSG00000002910.12	ENST00000379656.7	716	5	1861	0	1861	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCTTAGCCAACTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	71289811	71289501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71289665_71289753
ENSMUSG00000002910.12_71289612_71290012_1	chr8	-	312	2	ISM	ENSMUSG00000002910.12	ENST00000379656.7	716	5	1660	110	1660	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGGCACGGTCCCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	71290012	71289611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71289665_71289753
ENSMUSG00000002910.12_71289999_71291485_1	chr8	-	258	3	ISM	ENSMUSG00000002910.12	ENST00000379656.7	716	5	187	497	187	-497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCTTTGCGGAGATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	71291485	71289998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71290011_71290087_71290182_71291333
ENSMUSG00000002910.12_71290087_71291812_1	chr8	-	355	4	ISM	ENSMUSG00000002910.12	ENST00000222250.5	1011	6	237	585	-140	-585	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATGGGGAGCTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	71291812	71290086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71290182_71291333_71291486_71291622_71291690_71291771
ENSMUSG00000002910.12_71291379_71291896_1	chr8	-	299	3	ISM	ENSMUSG00000002910.12	ENST00000222250.5	1011	6	153	1877	153	-1877	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCATTGAACCTGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	71291896	71291378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71291486_71291622_71291690_71291771
ENSMUSG00000002910.12_71291434_71291946_1	chr8	-	294	3	ISM	ENSMUSG00000002910.12	ENST00000222250.5	1011	6	103	1932	103	-1932	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCACTCTGCACCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	71291946	71291433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71291486_71291622_71291690_71291771
ENSMUSG00000002944.16_17990714_18016225_1	chr5	-	724	7	ISM	ENSMUSG00000002944.16	ENST00000538969.5	1246	11	17668	0	17668	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTTAAGCAAAGTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	18016225	17990713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_17990885_17992683_17992739_17993249_17993324_18000576_18000696_18001993_18002182_18003226_18003297_18016178
ENSMUSG00000002944.16_17990816_18018067_1	chr5	-	679	8	ISM	ENSMUSG00000002944.16	ENST00000538969.5	1246	11	15826	102	15826	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGGTAGAGATGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	18018067	17990815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_17990885_17992683_17992739_17993249_17993324_18000576_18000696_18001993_18002182_18003226_18003297_18016178_18016226_18018010
ENSMUSG00000002944.16_17990867_18003253_1	chr5	-	293	5	ISM	ENSMUSG00000002944.16	ENST00000544133.5	1238	11	30640	153	30640	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGCAGAAATGTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	18003253	17990866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_17990885_17992683_17992739_17993249_17993324_18000576_18000696_18003226
ENSMUSG00000002944.16_17992684_18019731_1	chr5	-	706	8	ISM	ENSMUSG00000002944.16	ENST00000538969.5	1246	11	14162	1970	14162	-1970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTATTTCATTATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	18019731	17992683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_17992739_17993249_17993324_18000576_18000696_18001993_18002182_18003226_18003297_18016178_18016226_18018010_18018103_18019670
ENSMUSG00000002944.16_17993250_18016228_1	chr5	-	313	4	ISM	ENSMUSG00000002944.16	ENST00000544133.5	1238	11	17665	2536	17665	-2536	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTCCCTAACAATGT	NA	NA	NA	NA	NA	NA	NA	NA	18016228	17993249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_17993324_18000576_18000696_18003226_18003297_18016178
ENSMUSG00000002944.16_18000637_18025495_1	chr5	-	662	7	ISM	ENSMUSG00000002944.16	ENST00000538969.5	1246	11	8398	9923	8398	-9923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATTGAAGGCTTACATCC	NA	NA	NA	NA	NA	NA	NA	NA	18025495	18000636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_18000696_18001993_18002182_18003226_18003297_18016178_18016226_18018010_18018103_18019670_18019819_18025437
ENSMUSG00000002944.16_18000638_18019134_1	chr5	-	291	5	ISM	ENSMUSG00000002944.16	ENST00000544133.5	1238	11	14759	9924	14759	-9924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTATTGAAGGCTTACATC	NA	NA	NA	NA	NA	NA	NA	NA	18019134	18000637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_18000696_18003226_18003297_18016178_18016226_18018010_18018103_18019110
ENSMUSG00000002944.16_18000681_18025557_1	chr5	-	680	7	ISM	ENSMUSG00000002944.16	ENST00000538969.5	1246	11	8336	9967	8336	-9967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGCTTCCACATTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	18025557	18000680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_18000696_18001993_18002182_18003226_18003297_18016178_18016226_18018010_18018103_18019670_18019819_18025437
ENSMUSG00000002944.16_18002093_18025531_1	chr5	-	603	5	ISM	ENSMUSG00000002944.16	ENST00000433696.6	1309	10	8362	11379	8362	-11379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCCAGAATCCAGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	18025531	18002092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_18002182_18018010_18018103_18019110_18019291_18019670_18019819_18025437
ENSMUSG00000002944.16_18002098_18033835_1	chr5	-	665	7	ISM	ENSMUSG00000002944.16	ENST00000538969.5	1246	11	58	11384	58	-11384	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACCCCTCCAGAATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	18033835	18002097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_18002182_18003226_18003297_18016178_18016226_18018010_18018103_18019670_18019819_18025437_18025599_18033772
ENSMUSG00000002944.16_18002156_18033883_1	chr5	-	655	7	ISM	ENSMUSG00000002944.16	ENST00000538969.5	1246	11	10	11442	10	-11442	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCGACCTTAAAGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	18033883	18002155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_18002182_18003226_18003297_18016178_18016226_18018010_18018103_18019670_18019819_18025437_18025599_18033772
ENSMUSG00000002949.16_4309731_4318015_1	chr8	-	1368	9	NNC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	7898	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACGGTTTGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	4318015	4309730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317336_4317636_4317777_4317863
ENSMUSG00000002949.16_4309731_4318015_2	chr8	-	1370	9	NNC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	7898	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACGGTTTGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	4318015	4309730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317770_4317859
ENSMUSG00000002949.16_4309731_4318380_1	chr8	-	1452	10	ISM	ENSMUSG00000002949.16	ENSMUST00000003029.14	1790	13	7533	0	7533	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACGGTTTGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	4318380	4309730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299
ENSMUSG00000002949.16_4309984_4320025_1	chr8	-	1370	11	ISM	ENSMUSG00000002949.16	ENSMUST00000003029.14	1790	13	5888	253	5888	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTAGCAGGATGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	4320025	4309983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854
ENSMUSG00000002949.16_4310100_4324232_1	chr8	-	1350	12	ISM	ENSMUSG00000002949.16	ENSMUST00000003029.14	1790	13	1681	369	1681	-369	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATGGGACAGACACACA	NA	NA	NA	NA	NA	NA	NA	NA	4324232	4310099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136
ENSMUSG00000002949.16_4310100_4325849_1	chr8	-	1357	13	FSM	ENSMUSG00000002949.16	ENSMUST00000003029.14	1790	13	64	369	64	-369	multi-exon	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATGGGACAGACACACA	NA	NA	NA	NA	NA	NA	NA	NA	4325849	4310099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ENSMUSG00000002957.12_141142238_141178769_1	chr7	+	469	4	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	137	32791	137	-32791	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTCGCCGGAGAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	141142237	141178769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614
ENSMUSG00000002957.12_141142305_141182198_1	chr7	+	494	5	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	204	29362	204	-29362	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGACATCACCTGACCTA	NA	NA	NA	NA	NA	NA	NA	NA	141142304	141182198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145
ENSMUSG00000002957.12_141178678_141191298_1	chr7	+	522	5	ISM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	36592	21626	36577	-20262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCCCAGGAGCCACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	141178677	141191298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248
ENSMUSG00000002957.12_141178747_141191330_1	chr7	+	485	5	ISM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	36661	21594	36646	-20230	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGCATTCAAATGCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	141178746	141191330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248
ENSMUSG00000002957.12_141178788_141191396_1	chr7	+	510	5	ISM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	36702	21528	36687	-20164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCCTGCTAGCAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	141178787	141191396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248
ENSMUSG00000002957.12_141182205_141192609_1	chr7	+	498	5	ISM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	40119	20315	40104	-18951	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCTACCTGGCTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	141182204	141192609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541
ENSMUSG00000002957.12_141184821_141192710_1	chr7	+	529	4	ISM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	42735	20214	42720	-18850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTCCTTGTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	141184820	141192710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141184924_141189719_141189829_141191248_141191397_141192541
ENSMUSG00000002957.12_141191296_141199448_1	chr7	+	493	4	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	49195	12112	49195	-12112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGCGACTATGTGAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	141191295	141199448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141191397_141192541_141192711_141194111_141194250_141199363
ENSMUSG00000002957.12_141191341_141199514_1	chr7	+	514	4	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	49240	12046	49240	-12046	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGGCTATGCTGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	141191340	141199514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141191397_141192541_141192711_141194111_141194250_141199363
ENSMUSG00000002957.12_141194120_141200747_1	chr7	+	454	4	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	52019	10813	52019	-10813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCGTCCCCACTCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	141194119	141200747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141194250_141199363_141199547_141200384_141200483_141200704
ENSMUSG00000002957.12_141194170_141200805_1	chr7	+	462	4	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	52069	10755	52069	-10755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAGAGGTAAAAGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	141194169	141200805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141194250_141199363_141199547_141200384_141200483_141200704
ENSMUSG00000002957.12_141194214_141200881_1	chr7	+	494	4	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	52113	10679	52113	-10679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCGGGCTGTGGAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	141194213	141200881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141194250_141199363_141199547_141200384_141200483_141200704
ENSMUSG00000002957.12_141199421_141201071_1	chr7	+	500	4	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	57320	10489	57320	-10489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATCTTGGCCAAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	141199420	141201071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141199547_141200384_141200483_141200704_141200937_141201027
ENSMUSG00000002957.12_141199496_141201145_1	chr7	+	499	4	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	57395	10415	57395	-10415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCATCGATGTGAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	141199495	141201145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141199547_141200384_141200483_141200704_141200937_141201027
ENSMUSG00000002957.12_141200429_141203563_1	chr7	+	493	4	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	58328	7997	58328	-7997	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGGCCGTGCCCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	141200428	141203563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141200483_141200704_141200937_141201027_141201202_141203530
ENSMUSG00000002957.12_141200812_141206087_1	chr7	+	530	4	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	58711	5473	58711	-5473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCGGCAGAATTTAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	141200811	141206087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141200937_141201027_141201202_141203530_141203695_141206020
ENSMUSG00000002957.12_141201114_141209175_1	chr7	+	498	5	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	59013	2385	59013	-2385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTATATCTGATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	141201113	141209175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102
ENSMUSG00000002957.12_141201174_141209226_1	chr7	+	489	5	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	59073	2334	59073	-2334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGGTGTGTGCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	141201173	141209226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102
ENSMUSG00000002957.12_141206055_141210375_1	chr7	+	476	6	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	63954	1185	63954	-1185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAGTTGACCCGAATC	NA	NA	NA	NA	NA	NA	NA	NA	141206054	141210375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349
ENSMUSG00000002957.12_141207804_141210484_1	chr7	+	539	5	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	65703	1076	65703	-1076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGTCTCCACAACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	141207803	141210484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349
ENSMUSG00000002957.12_141209146_141211287_1	chr7	+	486	5	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	67045	273	67045	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCAGAAGATCAGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	141209145	141211287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ENSMUSG00000002957.12_141209195_141211345_1	chr7	+	495	5	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	67094	215	67094	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCACACTGCAGATAAAC	NA	NA	NA	NA	NA	NA	NA	NA	141209194	141211345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ENSMUSG00000002957.12_141210062_141211464_1	chr7	+	492	4	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	67961	96	67961	-96	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCAGGCCTGCCCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	141210061	141211464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141210089_141210197_141210268_141210349_141210485_141211204
ENSMUSG00000002963.18_44506818_44512065_1	chr7	+	1482	15	NNC	ENSMUSG00000002963.18	novel	1447	15	NA	NA	-26	-8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTCTGTGCACAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	44506817	44512065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510418_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511617_44511706_44511789_44511852_44511922
ENSMUSG00000002963.18_44507920_44512065_1	chr7	+	1347	14	ISM	ENSMUSG00000002963.18	ENSMUST00000107876.8	1770	17	1357	9	1076	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTCTGTGCACAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	44507919	44512065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUSG00000002963.18_44507920_44512065_2	chr7	+	1239	13	ISM	ENSMUSG00000002963.18	ENSMUST00000098478.7	1550	15	1154	8	1076	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTCTGTGCACAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	44507919	44512065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44508174_44509146_44509227_44509311_44509370_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUSG00000002963.18_44510799_44512176_1	chr7	+	616	6	ISM	ENSMUSG00000002963.18	ENST00000600573.5	1464	15	3955	-126	3955	102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGGGGCTTGAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	44510798	44512176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUSG00000002968.10_44528815_44534835_1	chr7	-	1649	13	ISM	ENSMUSG00000002968.10	ENSMUST00000003049.8	2619	18	7301	7	6953	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	961	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCCGGCTCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	44534835	44528814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762
ENSMUSG00000002968.10_44528815_44534900_1	chr7	-	1714	13	ISM	ENSMUSG00000002968.10	ENSMUST00000003049.8	2619	18	7236	7	6888	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCCGGCTCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	44534900	44528814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762
ENSMUSG00000002968.10_44529406_44535237_1	chr7	-	1590	13	ISM	ENSMUSG00000002968.10	ENSMUST00000208551.2	2678	17	6553	591	6551	-581	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCACCTGCCCAGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	44535237	44529405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207
ENSMUSG00000002968.10_44529460_44535284_1	chr7	-	1583	13	ISM	ENSMUSG00000002968.10	ENSMUST00000208551.2	2678	17	6506	645	6504	-635	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCACCACATCAGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	44535284	44529459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207
ENSMUSG00000002968.10_44529472_44535271_1	chr7	-	1558	13	ISM	ENSMUSG00000002968.10	ENSMUST00000208551.2	2678	17	6519	657	6517	-647	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTACATTGCTGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	44535271	44529471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207
ENSMUSG00000002968.10_44529735_44541294_1	chr7	-	1686	14	ISM	ENSMUSG00000002968.10	ENSMUST00000208551.2	2678	17	496	920	494	-910	internal_fragment	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCCAGAACCCTGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	44541294	44529734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206
ENSMUSG00000002968.10_44529875_44541319_1	chr7	-	1571	14	ISM	ENSMUSG00000002968.10	ENSMUST00000208551.2	2678	17	471	1060	469	-1050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGCCTCAGGGTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	44541319	44529874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206
ENSMUSG00000002968.10_44530058_44541568_1	chr7	-	1542	14	ISM	ENSMUSG00000002968.10	ENSMUST00000208551.2	2678	17	222	1243	220	-1233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACAGCAGGCACCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	44541568	44530057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522
ENSMUSG00000002968.10_44530343_44541790_1	chr7	-	1677	14	ISM	ENSMUSG00000002968.10	ENSMUST00000208551.2	2678	17	0	1528	0	-1518	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGAGCCAGGCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	44541790	44530342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ENSMUSG00000002981.11_19367491_19368052_1	chr7	-	469	2	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	30906	1995	30906	-1995	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCCCGGTGTGTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	19368052	19367490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19367888_19367980
ENSMUSG00000002981.11_19367647_19368843_1	chr7	-	450	3	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	30115	2151	30115	-2151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCCAGCAGAGGACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	19368843	19367646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19367888_19367980_19368149_19368802
ENSMUSG00000002981.11_19367791_19369305_1	chr7	-	474	4	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	29653	2295	29653	-2295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGCATCCAGGGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	19369305	19367790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232
ENSMUSG00000002981.11_19367869_19369328_1	chr7	-	419	4	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	29630	2373	29630	-2373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTACCAACGGTGGATCT	NA	NA	NA	NA	NA	NA	NA	NA	19369328	19367868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232
ENSMUSG00000002981.11_19368042_19369699_1	chr7	-	453	4	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	29259	2546	29259	-2546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTATTTGCCTTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	19369699	19368041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19368149_19368802_19368939_19369232_19369329_19369585
ENSMUSG00000002981.11_19368096_19369750_1	chr7	-	450	4	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	29208	2600	29208	-2600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATTTGCCCTGGCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	19369750	19368095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19368149_19368802_19368939_19369232_19369329_19369585
ENSMUSG00000002981.11_19368881_19371446_1	chr7	-	492	5	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	27512	3385	27512	-3385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCTTCTGTACCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	19371446	19368880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393
ENSMUSG00000002981.11_19369268_19371497_1	chr7	-	450	4	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	27461	3772	27461	-3772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATATTGAATCTTCAACC	NA	NA	NA	NA	NA	NA	NA	NA	19371497	19369267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19369329_19369585_19369777_19371002_19371097_19371393
ENSMUSG00000002981.11_19369709_19372117_1	chr7	-	483	4	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	26841	4213	26841	-4213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTCCTTTGTGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	19372117	19369708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19369777_19371002_19371097_19371393_19371639_19372041
ENSMUSG00000002981.11_19371423_19377010_1	chr7	-	457	4	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	21948	5927	21948	-5927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCGGATGAGGAGCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	19377010	19371422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19371639_19372041_19372163_19372856_19372943_19376976
ENSMUSG00000002981.11_19371543_19379840_1	chr7	-	495	5	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	19118	6047	19118	-6047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCCAGCCTACCACTG	NA	NA	NA	NA	NA	NA	NA	NA	19379840	19371542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766
ENSMUSG00000002981.11_19371619_19379895_1	chr7	-	474	5	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	19063	6123	19063	-6123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTGACTACTACCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	19379895	19371618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766
ENSMUSG00000002981.11_19372101_19380688_1	chr7	-	473	5	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	18270	6605	18270	-6605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGTGGATGACCACACAC	NA	NA	NA	NA	NA	NA	NA	NA	19380688	19372100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640
ENSMUSG00000002981.11_19376977_19389755_1	chr7	-	514	4	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	9203	11481	9203	-11481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTAACTTCCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	19389755	19376976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19377095_19379766_19379926_19380640_19380765_19389642
ENSMUSG00000002981.11_19377073_19398931_1	chr7	-	491	5	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	27	11577	27	-11577	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATATCCATGTCTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	19398931	19377072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ENSMUSG00000002983.18_19340142_19353582_1	chr7	-	1719	9	ISM	ENSMUSG00000002983.18	ENSMUST00000094762.10	2209	12	9781	0	9781	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTCTTCTTTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	19353582	19340141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438
ENSMUSG00000002983.18_19340286_19353758_1	chr7	-	1751	9	ISM	ENSMUSG00000002983.18	ENSMUST00000098754.5	2203	12	9605	138	9605	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGATGGACCCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	19353758	19340285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438
ENSMUSG00000002984.18_19435254_19444944_1	chr7	-	1040	6	ISM	ENSMUSG00000002984.18	ENSMUST00000032555.10	1646	9	4406	0	4406	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAAAAATAGGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	19444944	19435253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842
ENSMUSG00000002984.18_19435254_19444946_1	chr7	-	1036	6	NNC	ENSMUSG00000002984.18	novel	1646	9	NA	NA	4404	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAAAAATAGGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	19444946	19435253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_19435783_19436772_19436870_19436990_19437068_19437193_19437317_19444657_19444764_19444842
ENSMUSG00000002984.18_19435254_19444946_2	chr7	-	1036	6	NNC	ENSMUSG00000002984.18	novel	1646	9	NA	NA	4404	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	988	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAAAAATAGGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	19444946	19435253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444758_19444842
ENSMUSG00000002984.18_19435497_19447690_1	chr7	-	888	7	NNC	ENSMUSG00000002984.18	novel	1646	9	NA	NA	1660	-243	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCCCGGAGGGAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	19447690	19435496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444758_19444842_19444945_19447593
ENSMUSG00000002984.18_19435568_19448285_1	chr7	-	887	8	ISM	ENSMUSG00000002984.18	ENSMUST00000032555.10	1646	9	1065	314	1065	-314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTGGGAAGGAGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	19448285	19435567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217
ENSMUSG00000002984.18_19435625_19449022_1	chr7	-	941	9	NNC	ENSMUSG00000002984.18	novel	1646	9	NA	NA	328	-371	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGACCATCGCTGGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	19449022	19435624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444758_19444842_19444945_19447593_19447687_19448217_19448286_19448905
ENSMUSG00000002984.18_19435746_19449122_1	chr7	-	926	9	FSM	ENSMUSG00000002984.18	ENSMUST00000032555.10	1646	9	228	492	228	-492	multi-exon	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAAGAAGCTTCCGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	19449122	19435745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905
ENSMUSG00000002984.18_19436772_19449353_1	chr7	-	1023	9	ISM	ENSMUSG00000002984.18	ENSMUST00000093552.12	1577	10	10	1534	-3	-1518	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGAAGGCCTCAGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	19449353	19436771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449282
ENSMUSG00000002985.17_19430197_19431559_1	chr7	-	988	2	ISM	ENSMUSG00000002985.17	ENSMUST00000173739.8	1221	3	773	0	633	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGAGTCTCTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	19431559	19430196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19431029_19431403
ENSMUSG00000002997.16_32008475_32111025_1	chr12	-	1448	12	FSM	ENSMUSG00000002997.16	ENSMUST00000003079.12	1657	12	209	0	209	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCCAAGCATGGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	32111025	32008474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_32008721_32010380_32010522_32012997_32013137_32013896_32013963_32015113_32015189_32017211_32017314_32022048_32022203_32025917_32026025_32037878_32037963_32043729_32043783_32088620_32088657_32110780
ENSMUSG00000002997.16_32008475_32111113_1	chr12	-	1536	12	FSM	ENSMUSG00000002997.16	ENSMUST00000003079.12	1657	12	121	0	121	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCCAAGCATGGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	32111113	32008474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_32008721_32010380_32010522_32012997_32013137_32013896_32013963_32015113_32015189_32017211_32017314_32022048_32022203_32025917_32026025_32037878_32037963_32043729_32043783_32088620_32088657_32110780
ENSMUSG00000003031.15_134898217_134901439_1	chr6	+	348	2	FSM	ENSMUSG00000003031.15	ENST00000396340.1	901	2	347	206	347	-206	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTGTATATAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	134898216	134901439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_134898358_134901232
ENSMUSG00000003032.9_55527143_55530126_1	chr4	-	1451	3	ISM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	2340	0	2340	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACAATCTCTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55530126	55527142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_55528301_55529717_55529883_55529998
ENSMUSG00000003032.9_55528239_55531990_1	chr4	-	1457	5	FSM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	476	1096	476	-1096	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACCAGGCACTACCGCAA	NA	NA	NA	NA	NA	NA	NA	NA	55531990	55528238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_55528301_55529717_55529883_55529998_55530984_55531629_55531751_55531866
ENSMUSG00000003032.9_55529798_55532127_1	chr4	-	1452	4	ISM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	339	2655	339	-2655	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACTTGTGACTATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	55532127	55529797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_55529883_55529998_55530984_55531629_55531751_55531866
ENSMUSG00000003032.9_55529999_55532297_1	chr4	-	1537	3	ISM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	169	2856	169	-2856	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTGGGGGGAAGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	55532297	55529998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_55530984_55531629_55531751_55531866
ENSMUSG00000003033.16_72993954_73005714_1	chr8	+	551	4	ISM	ENSMUSG00000003033.16	ENST00000590756.5	1205	10	51	4892	-13	-4892	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTACCTGAAGACAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	72993953	73005714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72994098_73003592_73003724_73004524_73004673_73005586
ENSMUSG00000003033.16_72993954_73007124_1	chr8	+	980	8	ISM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	92	4105	-13	-3482	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGTGAGAGGAGAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	72993953	73007124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052
ENSMUSG00000003033.16_72994061_73006721_1	chr8	+	486	5	ISM	ENSMUSG00000003033.16	ENST00000590756.5	1205	10	158	3885	94	-3885	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTGTGCGGCTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	72994060	73006721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72994098_73003592_73003724_73004524_73004673_73005586_73005714_73006678
ENSMUSG00000003033.16_73000481_73007419_1	chr8	+	949	8	ISM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	6619	3810	6514	-3187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTCAAGTGGGTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	73000480	73007419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318
ENSMUSG00000003033.16_73000531_73005661_1	chr8	+	565	5	ISM	ENSMUSG00000003033.16	ENST00000444449.6	1390	12	6564	4945	6564	-4945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTTACGCCTGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	73000530	73005661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005552
ENSMUSG00000003033.16_73000592_73005691_1	chr8	+	534	5	ISM	ENSMUSG00000003033.16	ENST00000444449.6	1390	12	6625	4915	6625	-4915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTCTTCGACAACACAGG	NA	NA	NA	NA	NA	NA	NA	NA	73000591	73005691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005552
ENSMUSG00000003033.16_73002957_73009666_1	chr8	+	974	8	ISM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	9095	1563	8990	-940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGAATGTGTTAGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	73002956	73009666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540
ENSMUSG00000003033.16_73003590_73010026_1	chr8	+	985	8	ISM	ENSMUSG00000003033.16	ENST00000590756.5	1205	10	9687	580	9623	-580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1462	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGCTGCCTGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	73003589	73010026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950
ENSMUSG00000003033.16_73004525_73010606_1	chr8	+	879	8	ISM	ENSMUSG00000003033.16	ENST00000590756.5	1205	10	10622	0	10558	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCCACCAGCCCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	73004524	73010606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ENSMUSG00000003033.16_73004594_73007386_1	chr8	+	523	5	ISM	ENSMUSG00000003033.16	ENST00000444449.6	1390	12	10627	3220	10627	-3220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGATTCACCCAAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	73004593	73007386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_73004673_73005552_73005714_73006678_73006822_73007052_73007125_73007318
ENSMUSG00000003033.16_73004653_73007432_1	chr8	+	510	5	ISM	ENSMUSG00000003033.16	ENST00000444449.6	1390	12	10686	3174	10686	-3174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCTGAAAACAGTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	73004652	73007432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_73004673_73005552_73005714_73006678_73006822_73007052_73007125_73007318
ENSMUSG00000003033.16_73005586_73010756_1	chr8	+	882	7	ISM	ENSMUSG00000003033.16	ENST00000444449.6	1390	12	11619	-150	11619	150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1072	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGTGGGAAGGAAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	73005585	73010756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ENSMUSG00000003033.16_73006699_73010924_1	chr8	+	902	6	ISM	ENSMUSG00000003033.16	ENST00000444449.6	1390	12	12732	-318	12732	-305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	901	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGTGGCTGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	73006698	73010924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ENSMUSG00000003033.16_73006779_73010984_1	chr8	+	882	6	ISM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	12917	245	12812	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGAGGGCAGCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	73006778	73010984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ENSMUSG00000003033.16_73007401_73011229_1	chr8	+	930	4	ISM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	13539	0	13434	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	73007400	73011229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_73007478_73009540_73009667_73009950_73010027_73010578
ENSMUSG00000003037.17_72915157_72934273_1	chr8	+	962	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	113	3475	-41	238	multi-exon	FALSE	canonical	NA	NA	NA	NA	1680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCACAGAAGGTAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	72915156	72934273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ENSMUSG00000003037.17_72915203_72933925_1	chr8	+	548	8	FSM	ENSMUSG00000003037.17	ENST00000586682.1	663	8	5	110	5	-110	multi-exon	FALSE	canonical	NA	NA	NA	NA	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCACAGTGGAGCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	72915202	72933925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931483_72931515_72933888
ENSMUSG00000003037.17_72915203_72933929_1	chr8	+	552	8	FSM	ENSMUSG00000003037.17	ENST00000586682.1	663	8	5	106	5	-106	multi-exon	FALSE	canonical	NA	NA	NA	NA	1119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGTGGAGCAGCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	72915202	72933929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931483_72931515_72933888
ENSMUSG00000003037.17_72915203_72934314_1	chr8	+	957	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	159	3434	5	279	multi-exon	FALSE	canonical	NA	NA	NA	NA	1669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCCATACTCCAAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	72915202	72934314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ENSMUSG00000003037.17_72915203_72934370_1	chr8	+	1013	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	159	3378	5	335	multi-exon	FALSE	canonical	NA	NA	NA	NA	1701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGCTGTTCTCAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	72915202	72934370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ENSMUSG00000003037.17_72922269_72934035_1	chr8	+	536	7	ISM	ENSMUSG00000003037.17	ENST00000586682.1	663	8	7071	0	7071	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGGCCAGCCTCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	72922268	72934035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931483_72931515_72933888
ENSMUSG00000003037.17_72922295_72934479_1	chr8	+	974	7	ISM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	7251	3269	7097	444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGGACCGCTTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	72922294	72934479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ENSMUSG00000003037.17_72925129_72934589_1	chr8	+	1002	6	ISM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	10085	3159	9931	554	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACCAAAACCGCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	72925128	72934589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ENSMUSG00000003038.16_133694268_133695251_1	chr4	-	191	2	ISM	ENSMUSG00000003038.16	ENSMUST00000136327.2	772	5	-46	1456	-46	-1456	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCTTATCCATTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	133695251	133694267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133694313_133695105
ENSMUSG00000003039.10_72973608_72976496_1	chr8	+	764	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	34	1766	34	-1766	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGACACAGGACACAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	72973607	72976496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
ENSMUSG00000003039.10_72973855_72976636_1	chr8	+	737	3	ISM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	281	1626	281	-1626	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATTCCTGGTCTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	72973854	72976636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72973927_72975771_72975826_72976025
ENSMUSG00000003062.14_19541846_19579340_1	chr13	-	1280	9	FSM	ENSMUSG00000003062.14	ENST00000396013.5	1251	9	0	-29	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	19579340	19541845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579295
ENSMUSG00000003062.14_19542171_19579904_1	chr13	-	941	9	FSM	ENSMUSG00000003062.14	ENSMUST00000039694.13	1327	9	61	325	0	-159	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATCCCTGCCTGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	19579904	19542170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ENSMUSG00000003062.14_19543157_19557367_1	chr13	-	419	5	ISM	ENSMUSG00000003062.14	ENST00000434197.5	1146	7	3460	1280	3460	-1145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGAAGTGAGTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	19557367	19543156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_19543222_19551913_19552010_19554419_19554538_19556757_19556836_19557305
ENSMUSG00000003062.14_19551933_19560626_1	chr13	-	429	5	ISM	ENSMUSG00000003062.14	ENST00000434197.5	1146	7	201	10056	201	-2807	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTGAGTCTGAAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	19560626	19551932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_19552010_19554419_19554538_19556757_19556836_19557305_19557384_19560548
ENSMUSG00000003070.7_80015316_80025444_1	chr10	+	1731	4	FSM	ENSMUSG00000003070.7	ENSMUST00000003154.7	2131	4	0	400	0	-400	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACACTTTGCAATAAACT	NA	NA	NA	NA	NA	NA	NA	NA	80015315	80025444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80015725_80022585_80022900_80024275_80024342_80024502
ENSMUSG00000003070.7_80015535_80025544_1	chr10	+	1612	4	FSM	ENSMUSG00000003070.7	ENSMUST00000003154.7	2131	4	219	300	219	-300	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAGGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	80015534	80025544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80015725_80022585_80022900_80024275_80024342_80024502
ENSMUSG00000003070.7_80022673_80025844_1	chr10	+	1635	3	ISM	ENSMUSG00000003070.7	ENSMUST00000003154.7	2131	4	7357	0	7357	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGGCCTCTCTGTTACA	NA	NA	NA	NA	NA	NA	NA	NA	80022672	80025844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80022900_80024275_80024342_80024502
ENSMUSG00000003072.16_79977291_79978234_1	chr10	+	570	2	ISM	ENSMUSG00000003072.16	ENSMUST00000105367.8	1410	5	0	3413	0	-3412	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCCTCGCTTGCCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	79977290	79978234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79977501_79977874
ENSMUSG00000003099.12_16739037_16740163_1	chr7	-	321	3	ISM	ENSMUSG00000003099.12	ENST00000391919.1	1878	12	21564	458	21564	-458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCTGTCAGCAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	16740163	16739036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_16739097_16739185_16739268_16739984
ENSMUSG00000003099.12_16740888_16742596_1	chr7	-	339	4	ISM	ENSMUSG00000003099.12	ENST00000391919.1	1878	12	19131	2309	19131	-2309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACTCTGGATGACATCC	NA	NA	NA	NA	NA	NA	NA	NA	16742596	16740887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_16740920_16741028_16741172_16741650_16741757_16742538
ENSMUSG00000003099.12_16741721_16749395_1	chr7	-	330	4	ISM	ENSMUSG00000003099.12	ENST00000391919.1	1878	12	12332	3142	12332	-3142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTTGAAGTGATCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	16749395	16741720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_16741757_16742538_16742638_16743799_16743922_16749322
ENSMUSG00000003099.12_16743874_16756442_1	chr7	-	299	3	ISM	ENSMUSG00000003099.12	ENST00000391919.1	1878	12	5285	5295	5285	-5295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCACCTTCATGAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	16756442	16743873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_16743922_16749322_16749471_16756339
ENSMUSG00000003099.12_16743874_16756510_1	chr7	-	367	3	ISM	ENSMUSG00000003099.12	ENST00000391919.1	1878	12	5217	5295	5217	-5295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCACCTTCATGAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	16756510	16743873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_16743922_16749322_16749471_16756339
ENSMUSG00000003131.8_45879839_45884256_1	chr9	-	443	2	ISM	ENSMUSG00000003131.8	ENSMUST00000214179.2	794	6	12436	-143	5771	143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAAAGGTTTTGTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	45884256	45879838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45880265_45884239
ENSMUSG00000003131.8_45880236_45889972_1	chr9	-	392	5	ISM	ENSMUSG00000003131.8	ENSMUST00000214179.2	794	6	6720	254	55	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTTTAAGACAAAAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	45889972	45880235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939
ENSMUSG00000003131.8_45886431_45896205_1	chr9	-	446	4	ISM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	144	12274	144	-6449	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTTTTATGGCGACTAA	NA	NA	NA	NA	NA	NA	NA	NA	45896205	45886430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45886496_45887338_45887429_45889939_45890028_45896002
ENSMUSG00000003153.11_122706674_122708452_1	chr6	-	527	2	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	11252	1906	11252	91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAGGAAGCCTACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	122708452	122706673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_122707100_122708351
ENSMUSG00000003153.11_122706739_122708528_1	chr6	-	538	2	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	11176	1971	11176	26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACCAGATCGCCAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	122708528	122706738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_122707100_122708351
ENSMUSG00000003153.11_122707010_122712451_1	chr6	-	571	5	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	7253	2242	7253	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGGACTTTCGAGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	122712451	122707009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381
ENSMUSG00000003153.11_122707056_122712518_1	chr6	-	592	5	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	7186	2288	7186	-291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTCTTCCTAATCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	122712518	122707055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381
ENSMUSG00000003153.11_122709768_122714118_1	chr6	-	519	4	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	5586	5000	5586	-3003	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCAGGCGTGGTCAATAC	NA	NA	NA	NA	NA	NA	NA	NA	122714118	122709767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_122709834_122712381_122712570_122713537_122713701_122714016
ENSMUSG00000003153.11_122709803_122714184_1	chr6	-	550	4	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	5520	5035	5520	-3038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCGGGTGTCCAGGAACCG	NA	NA	NA	NA	NA	NA	NA	NA	122714184	122709802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_122709834_122712381_122712570_122713537_122713701_122714016
ENSMUSG00000003153.11_122712458_122716809_1	chr6	-	534	4	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	2895	7690	2895	-5693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCCAACTACGTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	122716809	122712457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_122712570_122713537_122713701_122714016_122714258_122716791
ENSMUSG00000003153.11_122712517_122716861_1	chr6	-	527	4	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	2843	7749	2843	-5752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATGAGAGTGTTCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	122716861	122712516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_122712570_122713537_122713701_122714016_122714258_122716791
ENSMUSG00000003153.11_122713624_122717403_1	chr6	-	536	4	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	2301	8856	2301	-6859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCAAAGCGCAGCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	122717403	122713623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_122713701_122714016_122714258_122716791_122716953_122717346
ENSMUSG00000003153.11_122714044_122774728_1	chr6	-	512	4	ISM	ENSMUSG00000003153.11	ENST00000396589.6	2119	10	112	7650	112	-7279	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTTGTTGGGATTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	122774728	122714043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_122714258_122716791_122716953_122717346_122717440_122774684
ENSMUSG00000003153.11_122714044_122774776_1	chr6	-	560	4	ISM	ENSMUSG00000003153.11	ENST00000396589.6	2119	10	64	7650	64	-7279	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTTGTTGGGATTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	122774776	122714043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_122714258_122716791_122716953_122717346_122717440_122774684
ENSMUSG00000003161.16_8106558_8119158_2	chr5	+	2218	8	NNC	ENSMUSG00000003161.16	novel	2251	8	NA	NA	31	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCCATAAGCATCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	8106557	8119158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117541
ENSMUSG00000003161.16_8107537_8119158_1	chr5	+	2139	7	NNC	ENSMUSG00000003161.16	novel	2504	8	NA	NA	1010	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCCATAAGCATCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	8107536	8119158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113643_8113751_8114557_8114617_8117532
ENSMUSG00000003161.16_8107537_8119158_2	chr5	+	2125	6	NNC	ENSMUSG00000003161.16	novel	2504	8	NA	NA	1010	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCCATAAGCATCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	8107536	8119158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_8107622_8109352_8109423_8113236_8113408_8113636_8113751_8114557_8114617_8117532
ENSMUSG00000003166.21_17658225_17661871_1	chr16	-	2453	2	ISM	ENSMUSG00000003166.21	ENSMUST00000066127.13	3790	9	47650	0	47586	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGCATGGTCAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	17661871	17658224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17660642_17661835
ENSMUSG00000003166.21_17658225_17661961_1	chr16	-	2543	2	ISM	ENSMUSG00000003166.21	ENSMUST00000066127.13	3790	9	47560	0	47496	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGCATGGTCAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	17661961	17658224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17660642_17661835
ENSMUSG00000003166.21_17658225_17662030_1	chr16	-	2612	2	ISM	ENSMUSG00000003166.21	ENSMUST00000066127.13	3790	9	47491	0	47427	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGCATGGTCAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	17662030	17658224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17660642_17661835
ENSMUSG00000003166.21_17658459_17663041_1	chr16	-	2615	3	ISM	ENSMUSG00000003166.21	ENSMUST00000066127.13	3790	9	46480	234	46416	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTAGGAGGCCCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	17663041	17658458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17660642_17661835_17662073_17662846
ENSMUSG00000003166.21_17658958_17675198_1	chr16	-	2532	6	ISM	ENSMUSG00000003166.21	ENSMUST00000117082.2	2987	10	34259	-216	34259	216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCTGCAGACATCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	17675198	17658957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121
ENSMUSG00000003166.21_17659380_17690500_1	chr16	-	2527	9	ISM	ENSMUSG00000003166.21	ENSMUST00000012152.13	4045	10	19057	1161	18957	-206	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTGCAATTTTTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	17690500	17659379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426
ENSMUSG00000003166.21_17659492_17709318_1	chr16	-	2533	10	FSM	ENSMUSG00000003166.21	ENSMUST00000012152.13	4045	10	239	1273	139	-318	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTACCTGGGGATTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	17709318	17659491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ENSMUSG00000003166.21_17659618_17709457_1	chr16	-	2546	10	FSM	ENSMUSG00000003166.21	ENSMUST00000012152.13	4045	10	100	1399	0	-444	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGGAAGAGAATGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	17709457	17659617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ENSMUSG00000003166.21_17659690_17709518_1	chr16	-	2535	10	FSM	ENSMUSG00000003166.21	ENSMUST00000012152.13	4045	10	39	1471	3	-516	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGCTTGCTGGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	17709518	17659689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ENSMUSG00000003184.16_44647072_44652272_1	chr7	+	2025	8	NNC	ENSMUSG00000003184.16	novel	2031	8	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	44647071	44652272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651207_44651587
ENSMUSG00000003184.16_44647072_44652272_2	chr7	+	2030	8	NNC	ENSMUSG00000003184.16	novel	2031	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	44647071	44652272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_44647337_44648133_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
ENSMUSG00000003184.16_44647113_44651774_1	chr7	+	1611	7	FSM	ENSMUSG00000003184.16	ENST00000597198.5	1527	7	-84	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAGCTGCTACCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	44647112	44651774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44647479_44648128_44648302_44649315_44649492_44649755_44649971_44650068_44650447_44651096_44651213_44651587
ENSMUSG00000003184.16_44647113_44651774_2	chr7	+	1610	7	NNC	ENSMUSG00000003184.16	novel	1527	7	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAGCTGCTACCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	44647112	44651774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_44647479_44648129_44648302_44649315_44649492_44649755_44649971_44650068_44650447_44651096_44651213_44651587
ENSMUSG00000003184.16_44647113_44651774_3	chr7	+	1605	7	NNC	ENSMUSG00000003184.16	novel	1527	7	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAGCTGCTACCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	44647112	44651774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_44647479_44648128_44648302_44649315_44649492_44649755_44649971_44650068_44650447_44651096_44651207_44651587
ENSMUSG00000003190.13_44640646_44647241_1	chr7	-	1313	7	FSM	ENSMUSG00000003190.13	ENSMUST00000003290.12	1075	7	-238	0	116	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44647241	44640645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44640879_44642167_44642456_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ENSMUSG00000003190.13_44640813_44647319_1	chr7	-	757	4	FSM	ENSMUSG00000003190.13	ENST00000614495.4	865	4	38	70	38	-64	multi-exon	FALSE	canonical	NA	NA	NA	NA	2595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCATAGATGACTGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	44647319	44640812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44640879_44645967_44646111_44646301_44646417_44646886
ENSMUSG00000003190.13_44640813_44647319_2	chr7	-	1224	7	FSM	ENSMUSG00000003190.13	ENSMUST00000003290.12	1075	7	-316	167	38	-64	multi-exon	FALSE	canonical	NA	NA	NA	NA	2349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCATAGATGACTGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	44647319	44640812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44640879_44642167_44642456_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ENSMUSG00000003190.13_44640827_44646018_1	chr7	-	328	4	ISM	ENSMUSG00000003190.13	ENST00000619007.4	1090	6	1339	84	968	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTCCTCTGACCCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	44646018	44640826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44640875_44643553_44643696_44643786_44643874_44645967
ENSMUSG00000003199.17_56316454_56318015_1	chr17	+	398	3	ISM	ENSMUSG00000003199.17	ENSMUST00000159996.8	1444	12	223	5638	223	-5631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTGTTGGAGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	56316453	56318015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56316587_56317276_56317514_56317987
ENSMUSG00000003199.17_56318018_56319458_1	chr17	+	389	5	ISM	ENSMUSG00000003199.17	ENSMUST00000159996.8	1444	12	1787	4195	1787	-4188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTGATACTGCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	56318017	56319458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415
ENSMUSG00000003199.17_56318637_56321998_1	chr17	+	368	5	ISM	ENSMUSG00000003199.17	ENSMUST00000159996.8	1444	12	2406	1655	2406	-1648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAGCCCTGCAGTACCC	NA	NA	NA	NA	NA	NA	NA	NA	56318636	56321998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940
ENSMUSG00000003199.17_56318943_56322227_1	chr17	+	359	5	ISM	ENSMUSG00000003199.17	ENSMUST00000159996.8	1444	12	2712	1426	2712	-1419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGCCCTGAGTCCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	56318942	56322227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207
ENSMUSG00000003199.17_56319416_56322560_1	chr17	+	407	4	ISM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	3215	1230	3185	-1086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAACCTGCATGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	56319415	56322560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56319493_56321940_56322110_56322207_56322279_56322470
ENSMUSG00000003200.11_56324117_56324888_1	chr17	-	665	2	ISM	ENSMUSG00000003200.11	ENSMUST00000233803.2	1375	9	18688	-147	1574	147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCTTGAAGAGTGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	56324888	56324116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56324737_56324843
ENSMUSG00000003200.11_56324264_56325678_1	chr17	-	759	4	ISM	ENSMUSG00000003200.11	ENSMUST00000003268.11	2073	10	17957	514	784	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCAAGCAGAGGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	56325678	56324263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574
ENSMUSG00000003200.11_56324547_56326462_1	chr17	-	898	6	FSM	ENSMUSG00000003200.11	ENST00000582245.1	898	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGACTGGGCCTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	56326462	56324546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_56324776_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315
ENSMUSG00000003200.11_56324605_56326330_1	chr17	-	726	7	ISM	ENSMUSG00000003200.11	ENSMUST00000003268.11	2073	10	17305	855	132	-58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACGGCCAATCAGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	56326330	56324604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315
ENSMUSG00000003200.11_56324683_56326359_1	chr17	-	677	7	ISM	ENSMUSG00000003200.11	ENSMUST00000003268.11	2073	10	17276	933	103	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCGAGCTGGGCTTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	56326359	56324682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315
ENSMUSG00000003200.11_56325070_56327159_1	chr17	-	689	7	ISM	ENSMUSG00000003200.11	ENSMUST00000003268.11	2073	10	16476	1320	-697	504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCGGCCCCGGGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	56327159	56325069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122
ENSMUSG00000003200.11_56325574_56343456_1	chr17	-	721	7	NNC	ENSMUSG00000003200.11	novel	726	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1014	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTCCTCCCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	56343456	56325573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_56325673_56325799_56325963_56326039_56326174_56326315_56326460_56326925_56326996_56327122_56327192_56343414
ENSMUSG00000003200.11_56325574_56343456_2	chr17	-	726	7	ISM	ENSMUSG00000003200.11	ENSMUST00000233803.2	1375	9	120	1310	3	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTCCTCCCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	56343456	56325573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ENSMUSG00000003200.11_56325659_56343568_1	chr17	-	753	7	ISM	ENSMUSG00000003200.11	ENSMUST00000233803.2	1375	9	8	1395	8	-85	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGCCCTGGTGGATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	56343568	56325658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ENSMUSG00000003226.8_58287827_58297728_1	chr10	+	1041	8	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	23	18913	23	7318	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGGCCAGTCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	58287826	58297728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657
ENSMUSG00000003226.8_58289134_58297867_1	chr10	+	1133	7	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	1330	18774	1330	7457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTGCATCTTTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	58289133	58297867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657
ENSMUSG00000003226.8_58290473_58299748_1	chr10	+	1051	7	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	2669	16893	2669	9338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCATTTGCCTCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	58290472	58299748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640
ENSMUSG00000003226.8_58290487_58300294_1	chr10	+	1355	9	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	2683	16347	2683	9884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACGGCCTTCAACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	58290486	58300294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226
ENSMUSG00000003226.8_58291130_58299984_1	chr10	+	1041	7	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	3326	16657	3326	9574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTTTGCCACTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	58291129	58299984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904
ENSMUSG00000003226.8_58291170_58300991_1	chr10	+	1326	9	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	3366	15650	3366	10581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTCCTGAACCTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	58291169	58300991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886
ENSMUSG00000003226.8_58291629_58301403_1	chr10	+	1421	9	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	3825	15238	3825	10993	internal_fragment	TRUE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTGAAATAAGAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	58291628	58301403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265
ENSMUSG00000003226.8_58291734_58301403_1	chr10	+	1316	9	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	3930	15238	3930	10993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTGAAATAAGAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	58291733	58301403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265
ENSMUSG00000003226.8_58293412_58301631_1	chr10	+	1422	9	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	5608	15010	5608	11221	internal_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTGCTGGCTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	58293411	58301631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484
ENSMUSG00000003226.8_58293552_58302989_1	chr10	+	1335	10	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	5748	13652	5748	12579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGAAGACTACAGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	58293551	58302989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936
ENSMUSG00000003226.8_58296336_58303116_1	chr10	+	1411	9	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	8532	13525	8532	12706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGTAGAATGCAAACGAG	NA	NA	NA	NA	NA	NA	NA	NA	58296335	58303116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936
ENSMUSG00000003226.8_58297654_58303295_1	chr10	+	1407	9	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	9850	13346	9850	12885	internal_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACATTTAGTTTGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	58297653	58303295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211
ENSMUSG00000003226.8_58299792_58314454_1	chr10	+	1316	11	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	11988	2187	11988	-2187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGCATTCCTGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	58299791	58314454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58314411
ENSMUSG00000003226.8_58301571_58314883_1	chr10	+	1028	6	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	13767	1758	13767	-1758	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAAAGTTTTGTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	58301570	58314883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58314411
ENSMUSG00000003226.8_58301616_58314953_1	chr10	+	1053	6	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	13812	1688	13812	-1688	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGTTTGGGGAATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	58301615	58314953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58314411
ENSMUSG00000003226.8_58303042_58315069_1	chr10	+	1048	5	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	15238	1572	15238	-1572	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTGAAGCCTCTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	58303041	58315069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58314411
ENSMUSG00000003233.13_20342723_20350291_1	chr16	+	1680	11	ISM	ENSMUSG00000003233.13	ENSMUST00000003318.13	2519	15	6991	130	6867	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCCGGCTGCACCCCC	NA	NA	NA	NA	NA	NA	NA	NA	20342722	20350291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829
ENSMUSG00000003234.17_20367327_20370459_1	chr16	+	1079	9	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	0	9670	0	-9670	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCCTGCTGTTCTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	20367326	20370459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393
ENSMUSG00000003234.17_20367767_20371112_1	chr16	+	1093	12	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	440	9017	440	-9017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGACTTTGAAACCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	20367766	20371112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008
ENSMUSG00000003234.17_20368769_20371342_1	chr16	+	990	10	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	1442	8787	1442	-8787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAAGTGCAGAGTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	20368768	20371342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303
ENSMUSG00000003234.17_20369012_20377506_1	chr16	+	990	11	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	1685	2623	1685	-2623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTATGATCCTAAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	20369011	20377506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446
ENSMUSG00000003234.17_20369220_20378081_1	chr16	+	992	11	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	1893	2048	1893	-2048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGGGGGACCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	20369219	20378081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040
ENSMUSG00000003234.17_20369327_20378483_1	chr16	+	1026	12	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	2000	1646	2000	-1646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGGGGTACGGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	20369326	20378483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390
ENSMUSG00000003234.17_20370221_20378797_1	chr16	+	1050	12	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	2894	1332	2894	-1332	internal_fragment	TRUE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTATGGGGGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	20370220	20378797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664
ENSMUSG00000003234.17_20370553_20379020_1	chr16	+	997	11	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	3226	1109	3226	-1109	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCATGTCCTTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	20370552	20379020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932
ENSMUSG00000003234.17_20370848_20379156_1	chr16	+	965	10	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	3521	973	3521	-973	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGAGCTGTGGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	20370847	20379156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ENSMUSG00000003234.17_20371006_20379260_1	chr16	+	1015	9	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	3679	869	3679	-869	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGAGCCCCAGTTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	20371005	20379260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ENSMUSG00000003234.17_20371132_20379364_1	chr16	+	993	9	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	3805	765	3805	-765	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGGGACAGCCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	20371131	20379364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ENSMUSG00000003234.17_20377553_20379676_1	chr16	+	999	6	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	10226	453	10226	-453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGCAGCAGTCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	20377552	20379676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ENSMUSG00000003234.17_20378717_20379920_1	chr16	+	983	3	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	11390	209	11390	-209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATCTCTGGCCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	20378716	20379920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20378798_20378932_20379021_20379106
ENSMUSG00000003234.17_20378770_20379981_1	chr16	+	991	3	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	11443	148	11443	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTTCCCAGTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	20378769	20379981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20378798_20378932_20379021_20379106
ENSMUSG00000003235.14_20317567_20325221_1	chr16	+	1830	12	ISM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	0	2852	0	-2852	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACCAACCCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	20317566	20325221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130
ENSMUSG00000003235.14_20317709_20326811_1	chr16	+	1846	14	ISM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	142	1262	142	-1262	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAAGCGTGCAGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	20317708	20326811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777
ENSMUSG00000003235.14_20317787_20326834_1	chr16	+	1791	14	ISM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	220	1239	220	-1239	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAAGCATTGGCAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	20317786	20326834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777
ENSMUSG00000003235.14_20317829_20326895_1	chr16	+	1810	14	ISM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	262	1178	262	-1178	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAAGGTGAATTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	20317828	20326895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777
ENSMUSG00000003235.14_20318934_20327569_1	chr16	+	1912	14	ISM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	1367	504	1367	-504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACGCTGCCCTCTGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	20318933	20327569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458
ENSMUSG00000003235.14_20320149_20327766_1	chr16	+	1807	14	ISM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	2582	307	2582	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTGACTGCCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	20320148	20327766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ENSMUSG00000003235.14_20320172_20327863_1	chr16	+	1881	14	ISM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	2605	210	2605	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGAATTATTGGAACGG	NA	NA	NA	NA	NA	NA	NA	NA	20320171	20327863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ENSMUSG00000003235.14_20320381_20327880_1	chr16	+	1769	13	ISM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	2814	193	2814	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGAAGTTGCAACTACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	20320380	20327880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ENSMUSG00000003235.14_20320414_20327955_1	chr16	+	1811	13	ISM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	2847	118	2847	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTAGACTGCGTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	20320413	20327955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ENSMUSG00000003235.14_20320468_20328073_1	chr16	+	1875	13	ISM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	2901	0	2901	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	20320467	20328073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ENSMUSG00000003269.18_45456061_45460073_1	chr7	-	1711	6	NNC	ENSMUSG00000003269.18	novel	2519	12	NA	NA	3229	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGCTAGGAACGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	45460073	45456060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459546_45459663_45459994
ENSMUSG00000003269.18_45456395_45461629_1	chr7	-	1667	9	NNC	ENSMUSG00000003269.18	novel	1983	11	NA	NA	1673	-334	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGCTTCTTCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	45461629	45456394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459546_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603
ENSMUSG00000003269.18_45456516_45462324_1	chr7	-	1693	10	NNC	ENSMUSG00000003269.18	novel	1983	11	NA	NA	978	-455	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGCAGAGACCCCAATG	NA	NA	NA	NA	NA	NA	NA	NA	45462324	45456515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459546_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270
ENSMUSG00000003269.18_45456757_45463590_1	chr7	-	1682	12	NNC	ENSMUSG00000003269.18	novel	2519	12	NA	NA	145	348	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTAAGACTAAAACAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	45463590	45456756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459546_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
ENSMUSG00000003269.18_45456872_45463711_1	chr7	-	1688	12	NNC	ENSMUSG00000003269.18	novel	2519	12	NA	NA	24	233	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGAGAGTTTACTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	45463711	45456871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459546_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
ENSMUSG00000003279.18_70868751_71068189_1	chr17	+	900	6	ISM	ENSMUSG00000003279.18	ENSMUST00000097288.4	2861	10	204	54899	-2	-54899	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACGGGCAAGGCCAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	70868750	71068189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_70868867_70900161_70900377_70964448_70964627_70969563_70969805_71025190_71025221_71068069
ENSMUSG00000003279.18_70868811_71068241_1	chr17	+	892	6	ISM	ENSMUSG00000003279.18	ENSMUST00000097288.4	2861	10	264	54847	58	-54847	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCACCGAAAGTCTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	70868810	71068241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_70868867_70900161_70900377_70964448_70964627_70969563_70969805_71025190_71025221_71068069
ENSMUSG00000003279.18_70900250_71068401_1	chr17	+	908	5	ISM	ENSMUSG00000003279.18	ENSMUST00000097288.4	2861	10	31703	54687	31497	-54687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTTAAGAAAAACCGATG	NA	NA	NA	NA	NA	NA	NA	NA	70900249	71068401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_70900377_70964448_70964627_70969563_70969805_71025190_71025221_71068069
ENSMUSG00000003279.18_70900311_71073043_1	chr17	+	937	6	ISM	ENSMUSG00000003279.18	ENSMUST00000097288.4	2861	10	31764	50045	31558	-50045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCCAGTCCGTGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	70900310	71073043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_70900377_70964448_70964627_70969563_70969805_71025190_71025221_71068069_71068441_71072992
ENSMUSG00000003279.18_70964512_71093830_1	chr17	+	897	6	ISM	ENSMUSG00000003279.18	ENSMUST00000097288.4	2861	10	95965	29258	95759	-29258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACCTGGACTTCCATGATA	NA	NA	NA	NA	NA	NA	NA	NA	70964511	71093830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_70964627_70969563_70969805_71025190_71025221_71068069_71068441_71072992_71073085_71093782
ENSMUSG00000003279.18_70969602_71093999_1	chr17	+	913	5	ISM	ENSMUSG00000003279.18	ENSMUST00000097288.4	2861	10	101055	29089	100849	-29089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGATTTTGACCCCTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	70969601	71093999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_70969805_71025190_71025221_71068069_71068441_71072992_71073085_71093782
ENSMUSG00000003279.18_70969661_71094043_1	chr17	+	898	5	ISM	ENSMUSG00000003279.18	ENSMUST00000097288.4	2861	10	101114	29045	100908	-29045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTATCACAGAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	70969660	71094043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_70969805_71025190_71025221_71068069_71068441_71072992_71073085_71093782
ENSMUSG00000003279.18_71025190_71094204_1	chr17	+	916	4	ISM	ENSMUSG00000003279.18	ENSMUST00000097288.4	2861	10	156643	28884	156437	-28884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAATGCCTCCACTCG	NA	NA	NA	NA	NA	NA	NA	NA	71025189	71094204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71025221_71068069_71068441_71072992_71073085_71093782
ENSMUSG00000003279.18_71068068_71116274_1	chr17	+	979	4	ISM	ENSMUSG00000003279.18	ENSMUST00000097288.4	2861	10	199521	6814	199315	-6814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTACCATTCACATCAC	NA	NA	NA	NA	NA	NA	NA	NA	71068067	71116274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71068441_71072992_71073085_71093782_71094205_71116182
ENSMUSG00000003279.18_71072990_71125229_1	chr17	+	972	5	ISM	ENSMUSG00000003279.18	ENST00000539435.5	2306	11	204237	188	204237	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCGCCGAGGACCGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	71072989	71125229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71073085_71093782_71094205_71116182_71116275_71122188_71122342_71125019
ENSMUSG00000003282.10_3903852_3905589_1	chr4	-	1239	2	ISM	ENSMUSG00000003282.10	ENST00000429357.2	1894	4	32804	162	32793	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCACACTCTTCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	3905589	3903851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_3904948_3905446
ENSMUSG00000003282.10_3903949_3905606_1	chr4	-	1159	2	ISM	ENSMUSG00000003282.10	ENST00000429357.2	1894	4	32787	259	32776	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGATTTCTCTCAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	3905606	3903948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_3904948_3905446
ENSMUSG00000003282.10_3904083_3905777_1	chr4	-	1196	2	ISM	ENSMUSG00000003282.10	ENST00000429357.2	1894	4	32616	393	32605	-393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCCAGGATTCTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	3905777	3904082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_3904948_3905446
ENSMUSG00000003282.10_3904124_3909003_1	chr4	-	922	2	ISM	ENSMUSG00000003282.10	ENST00000423799.6	1677	3	29390	576	29379	-434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGAGTTACCTGATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	3909003	3904123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_3904948_3908905
ENSMUSG00000003282.10_3904257_3938382_1	chr4	-	957	3	FSM	ENSMUSG00000003282.10	ENST00000423799.6	1677	3	11	709	0	-567	multi-exon	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGGGAATGACATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	3938382	3904256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_3904948_3908905_3909003_3938213
ENSMUSG00000003299.11_20914034_20919195_1	chr9	+	942	8	ISM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	0	940	0	-940	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGATGGGTCCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	20914033	20919195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919037_20919118
ENSMUSG00000003299.11_20914214_20919882_1	chr9	+	855	9	FSM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	180	253	180	-253	multi-exon	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATACACTCCGCTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	20914213	20919882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919037_20919118_20919196_20919789
ENSMUSG00000003299.11_20914379_20920127_1	chr9	+	1021	8	ISM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	345	8	345	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	20914378	20920127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919037_20919118_20919196_20919789
ENSMUSG00000003308.16_21141027_21150128_1	chr9	-	2933	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	239	0	-19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCTCTGAATTAACC	NA	NA	NA	NA	NA	NA	NA	NA	21150128	21141026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
ENSMUSG00000003308.16_21141027_21150266_1	chr9	-	3071	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	101	0	101	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCTCTGAATTAACC	NA	NA	NA	NA	NA	NA	NA	NA	21150266	21141026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
ENSMUSG00000003308.16_21141237_21150367_1	chr9	-	2962	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	0	210	0	126	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAACTTCTCCTGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	21150367	21141236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
ENSMUSG00000003308.16_21142581_21150413_1	chr9	-	1762	5	ISM	ENSMUSG00000003308.16	ENSMUST00000194542.6	3151	6	215	1555	-38	-652	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGTGCACCAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	21150413	21142580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150371
ENSMUSG00000003309.15_21207730_21214061_1	chr9	-	569	5	ISM	ENSMUSG00000003309.15	ENST00000433173.1	959	7	2990	0	2990	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGGTGGCAGGCCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	21214061	21207729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21207805_21209495_21209622_21210574_21210734_21213757_21213824_21213918
ENSMUSG00000003309.15_21207730_21214061_2	chr9	-	569	5	NNC	ENSMUSG00000003309.15	novel	959	7	NA	NA	2990	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGGTGGCAGGCCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	21214061	21207729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_21207805_21209495_21209622_21210574_21210728_21213751_21213824_21213918
ENSMUSG00000003309.15_21207772_21216602_1	chr9	-	552	6	ISM	ENSMUSG00000003309.15	ENST00000433173.1	959	7	449	42	449	-42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGGCCCTGCCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	21216602	21207771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21207805_21209495_21209622_21210574_21210734_21213757_21213824_21213918_21214062_21216577
ENSMUSG00000003309.15_21209494_21216705_1	chr9	-	624	5	NNC	ENSMUSG00000003309.15	novel	1706	11	NA	NA	346	-1764	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCAGGGGTGGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	21216705	21209493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_21209622_21210574_21210728_21213751_21213824_21213918_21214062_21216577
ENSMUSG00000003309.15_21209494_21216705_2	chr9	-	620	5	NNC	ENSMUSG00000003309.15	novel	959	7	NA	NA	346	-1764	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCAGGGGTGGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	21216705	21209493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_21209622_21210574_21210734_21213757_21213824_21213918_21214058_21216577
ENSMUSG00000003309.15_21209567_21216818_1	chr9	-	580	6	ISM	ENSMUSG00000003309.15	ENST00000433173.1	959	7	233	1837	233	-1837	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGTAGAGGGCCGACCA	NA	NA	NA	NA	NA	NA	NA	NA	21216818	21209566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21209622_21210574_21210734_21213757_21213824_21213918_21214062_21216577_21216705_21216788
ENSMUSG00000003309.15_21210574_21216902_1	chr9	-	610	5	NNC	ENSMUSG00000003309.15	novel	1706	11	NA	NA	149	-2844	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGCTGGGAAAGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	21216902	21210573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_21210728_21213751_21213824_21213918_21214062_21216577_21216705_21216788
ENSMUSG00000003309.15_21210714_21217044_1	chr9	-	612	5	ISM	ENSMUSG00000003309.15	ENST00000433173.1	959	7	7	2984	7	-2984	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCGGTGGCCAATGGCG	NA	NA	NA	NA	NA	NA	NA	NA	21217044	21210713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21210734_21213757_21213824_21213918_21214062_21216577_21216705_21216788
ENSMUSG00000003316.15_111881727_111887299_1	chr8	-	3121	3	ISM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	98549	674	98549	-674	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGGGCCAGGGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	111887299	111881726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111884694_111886430_111886538_111887252
ENSMUSG00000003316.15_111882077_111889356_1	chr8	-	3142	6	ISM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	96492	1024	96492	573	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGCCTTTAATCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	111889356	111882076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269
ENSMUSG00000003316.15_111882361_111892326_1	chr8	-	3176	8	ISM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	93522	1308	93522	289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATTAGACATGGTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	111892326	111882360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188
ENSMUSG00000003316.15_111882771_111890440_1	chr8	-	1558	8	ISM	ENSMUSG00000003316.15	ENST00000205061.9	4440	27	95408	121	95408	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATCCCCTGCATAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	111890440	111882770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111883546_111884529_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402
ENSMUSG00000003316.15_111882800_111890525_1	chr8	-	1614	8	ISM	ENSMUSG00000003316.15	ENST00000205061.9	4440	27	95323	150	95323	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGCAGTGAGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	111890525	111882799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111883546_111884529_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402
ENSMUSG00000003316.15_111882881_111899887_1	chr8	-	3124	13	ISM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	85961	1828	85961	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCAGTTGCTCCAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	111899887	111882880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833
ENSMUSG00000003316.15_111883096_111896158_1	chr8	-	1589	11	ISM	ENSMUSG00000003316.15	ENST00000205061.9	4440	27	89690	446	89690	-446	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGGGTGGCATGTACA	NA	NA	NA	NA	NA	NA	NA	NA	111896158	111883095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111883546_111884529_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119
ENSMUSG00000003316.15_111883193_111905516_1	chr8	-	3098	16	ISM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	80332	2140	80332	-543	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTGTGAAGATGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	111905516	111883192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464
ENSMUSG00000003316.15_111883261_111897920_1	chr8	-	1562	12	ISM	ENSMUSG00000003316.15	ENST00000205061.9	4440	27	87928	611	87928	-611	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATCTGACAACCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	111897920	111883260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111883546_111884529_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861
ENSMUSG00000003316.15_111883368_111907654_1	chr8	-	3113	17	ISM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	78194	2315	78194	-718	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTGCATTAAAAGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	111907654	111883367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566
ENSMUSG00000003316.15_111883516_111900928_1	chr8	-	1577	15	ISM	ENSMUSG00000003316.15	ENST00000205061.9	4440	27	84920	866	84920	-866	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTTCTGAAGATTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	111900928	111883515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111883546_111884529_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865
ENSMUSG00000003316.15_111883812_111915371_1	chr8	-	3093	20	ISM	ENSMUSG00000003316.15	ENST00000205061.9	4440	27	70477	1162	70477	-1162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTCTCTGTGTCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	111915371	111883811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298
ENSMUSG00000003316.15_111883865_111915431_1	chr8	-	3100	20	ISM	ENSMUSG00000003316.15	ENST00000205061.9	4440	27	70417	1215	70417	-1215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGTCTCATAGCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	111915431	111883864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298
ENSMUSG00000003316.15_111884197_111924289_1	chr8	-	3160	23	ISM	ENSMUSG00000003316.15	ENST00000205061.9	4440	27	61559	1547	61559	-1547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTTAAAAAAAAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	111924289	111884196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224
ENSMUSG00000003316.15_111884306_111924345_1	chr8	-	3107	23	ISM	ENSMUSG00000003316.15	ENST00000205061.9	4440	27	61503	1656	61503	-1656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGGTAGCTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	111924345	111884305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224
ENSMUSG00000003316.15_111884375_111924406_1	chr8	-	3099	23	ISM	ENSMUSG00000003316.15	ENST00000205061.9	4440	27	61442	1725	61442	-1725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCATGTCCTCGGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	111924406	111884374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224
ENSMUSG00000003316.15_111884530_111904408_1	chr8	-	1703	15	ISM	ENSMUSG00000003316.15	ENST00000205061.9	4440	27	81440	1880	81440	-1880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGGCGCAGGCCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	111904408	111884529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276
ENSMUSG00000003316.15_111884530_111985476_1	chr8	-	3172	26	FSM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	372	3477	372	-1880	multi-exon	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGGCGCAGGCCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	111985476	111884529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ENSMUSG00000003316.15_111904376_111985542_1	chr8	-	1568	12	ISM	ENSMUSG00000003316.15	ENST00000205061.9	4440	27	306	21726	306	-21726	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGCGAGCCATGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	111985542	111904375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ENSMUSG00000003316.15_111905556_111985668_1	chr8	-	1564	11	ISM	ENSMUSG00000003316.15	ENST00000205061.9	4440	27	180	22906	180	-22906	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAATGAGACCAGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	111985668	111905555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ENSMUSG00000003316.15_111907565_111985832_1	chr8	-	1667	10	ISM	ENSMUSG00000003316.15	ENST00000205061.9	4440	27	16	24915	16	-24915	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTATTTTAAAAATAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	111985832	111907564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ENSMUSG00000003345.17_80470104_80474308_1	chr10	+	794	4	ISM	ENSMUSG00000003345.17	ENSMUST00000079773.14	2348	11	11432	2267	4614	-1863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGCAAGCGGCAGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	80470103	80474308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80470476_80473721_80473763_80473843_80474144_80474227
ENSMUSG00000003345.17_80473869_80475032_1	chr10	+	795	5	ISM	ENSMUSG00000003345.17	ENSMUST00000079773.14	2348	11	15197	1543	8379	-1139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTACGAGTATGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	80473868	80475032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918
ENSMUSG00000003345.17_80474285_80475988_1	chr10	+	822	7	ISM	ENSMUSG00000003345.17	ENSMUST00000085435.7	1825	12	8795	183	8795	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACCTGCAGGCACCATC	NA	NA	NA	NA	NA	NA	NA	NA	80474284	80475988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
ENSMUSG00000003345.17_80474384_80476092_1	chr10	+	827	7	ISM	ENSMUSG00000003345.17	ENSMUST00000085435.7	1825	12	8894	79	8894	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTATTTAAACCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	80474383	80476092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
ENSMUSG00000003345.17_80475473_80476575_1	chr10	+	852	3	ISM	ENSMUSG00000003345.17	ENSMUST00000085435.7	1825	12	9983	-404	9983	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGAATGTTGGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	80475472	80476575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80475498_80475601_80475709_80475855
ENSMUSG00000003346.15_80419488_80422667_1	chr10	-	1104	4	ISM	ENSMUSG00000003346.15	ENSMUST00000003436.12	1468	5	3508	0	24	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGCTTGGCTCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80422667	80419487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80419898_80419976_80420157_80421441_80421637_80422348
ENSMUSG00000003346.15_80419671_80421660_1	chr10	-	626	3	ISM	ENSMUSG00000003346.15	ENST00000250974.9	1349	5	4420	0	1031	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTGCAGGGACCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	80421660	80419670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80419898_80419976_80420157_80421441
ENSMUSG00000003346.15_80419671_80422667_1	chr10	-	820	4	NNC	ENSMUSG00000003346.15	novel	851	4	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTGCAGGGACCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	80422667	80419670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_80419898_80419976_80420117_80421441_80421583_80422355
ENSMUSG00000003346.15_80419671_80422667_2	chr10	-	827	4	FSM	ENSMUSG00000003346.15	ENST00000590661.1	851	4	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTGCAGGGACCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	80422667	80419670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80419898_80419976_80420117_80421441_80421583_80422348
ENSMUSG00000003346.15_80419674_80421758_1	chr10	-	721	3	ISM	ENSMUSG00000003346.15	ENST00000250974.9	1349	5	4322	3	933	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGCTGCAGGGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	80421758	80419673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80419898_80419976_80420157_80421441
ENSMUSG00000003346.15_80419799_80422458_1	chr10	-	739	4	ISM	ENSMUSG00000003346.15	ENST00000250974.9	1349	5	3622	128	233	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCAAAGGCTGTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	80422458	80419798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80419898_80419976_80420157_80421441_80421792_80422348
ENSMUSG00000003346.15_80420085_80422653_1	chr10	-	727	3	ISM	ENSMUSG00000003346.15	ENST00000250974.9	1349	5	3427	414	38	-414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACGCTACGAGTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	80422653	80420084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80420157_80421441_80421792_80422348
ENSMUSG00000003348.11_80521814_80525852_1	chr10	-	1361	2	ISM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	11837	727	11837	-727	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGTAGCCCTGGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	80525852	80521813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80523008_80525685
ENSMUSG00000003348.11_80521990_80527023_1	chr10	-	1342	3	ISM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	10666	903	10666	-903	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTACATTGTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	80527023	80521989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80523008_80525685_80525889_80526902
ENSMUSG00000003348.11_80522413_80537662_1	chr10	-	1329	4	FSM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	27	1326	27	-1326	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAAACTTGAGGCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	80537662	80522412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80523008_80525685_80525889_80526902_80527402_80537630
ENSMUSG00000003352.15_98537370_98539606_1	chr15	+	696	8	ISM	ENSMUSG00000003352.15	ENSMUST00000230490.2	2477	13	4384	2804	4384	-2804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGAGTCCTTTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	98537369	98539606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98538839_98538860_98539057_98539139_98539280_98539340_98539496
ENSMUSG00000003352.15_98538218_98540285_1	chr15	+	701	8	ISM	ENSMUSG00000003352.15	ENSMUST00000230490.2	2477	13	5232	2125	5232	-2125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCTTAGGGTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	98538217	98540285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_98538336_98538566_98538632_98538839_98538860_98539057_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189
ENSMUSG00000003352.15_98539096_98541182_1	chr15	+	655	7	ISM	ENSMUSG00000003352.15	ENSMUST00000230490.2	2477	13	6110	1228	6110	-1228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGGACAGCCTGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	98539095	98541182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ENSMUSG00000003352.15_98539538_98541302_1	chr15	+	632	5	ISM	ENSMUSG00000003352.15	ENSMUST00000230490.2	2477	13	6552	1108	6552	-1108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACCAGCCTCACCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	98539537	98541302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ENSMUSG00000003352.15_98539927_98541475_1	chr15	+	629	4	ISM	ENSMUSG00000003352.15	ENSMUST00000230490.2	2477	13	6941	935	6941	-935	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCAGGCACAGCGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	98539926	98541475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_98539972_98540189_98540286_98540382_98540533_98541137
ENSMUSG00000003352.15_98540429_98541669_1	chr15	+	636	2	ISM	ENSMUSG00000003352.15	ENSMUST00000230490.2	2477	13	7443	741	7443	-741	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTAGCCGTGTTCTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	98540428	98541669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_98540533_98541137
ENSMUSG00000003354.7_98618590_98620894_1	chr15	+	645	4	ISM	ENSMUSG00000003354.7	ENSMUST00000003444.6	1900	8	12502	323	28	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGAAGCAACCTACCCC	NA	NA	NA	NA	NA	NA	NA	NA	98618589	98620894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_98618663_98618838_98619058_98620398_98620552_98620694
ENSMUSG00000003355.8_98622428_98625892_1	chr15	-	370	6	FSM	ENSMUSG00000003355.8	ENSMUST00000003445.8	734	6	187	177	187	-177	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAGAAGCTGCTAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	98625892	98622427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091_98625180_98625563_98625630_98625837
ENSMUSG00000003360.16_98543215_98544268_1	chr15	-	728	2	ISM	ENSMUSG00000003360.16	ENST00000552545.1	2454	16	12048	-460	12048	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATGCCACGGGCGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98544268	98543214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98543899_98544224
ENSMUSG00000003360.16_98543268_98544323_1	chr15	-	730	2	ISM	ENSMUSG00000003360.16	ENST00000552545.1	2454	16	11993	-407	11993	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCCCATTTGGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	98544323	98543267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98543899_98544224
ENSMUSG00000003360.16_98543521_98545445_1	chr15	-	753	4	ISM	ENSMUSG00000003360.16	ENST00000552545.1	2454	16	10871	-154	10871	154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTAGGAGGCAGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	98545445	98543520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354
ENSMUSG00000003360.16_98543675_98556179_1	chr15	-	2317	16	FSM	ENSMUSG00000003360.16	ENST00000552545.1	2454	16	137	0	137	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCGCCTGACTGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	98556179	98543674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354_98545507_98546367_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549238_98549345_98549480_98549798_98549938_98550353_98550414_98550768_98550863_98554482_98554594_98556110
ENSMUSG00000003360.16_98543797_98556253_1	chr15	-	2269	16	FSM	ENSMUSG00000003360.16	ENST00000552545.1	2454	16	63	122	63	-122	multi-exon	FALSE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCATCCTGGAGAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	98556253	98543796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354_98545507_98546367_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549238_98549345_98549480_98549798_98549938_98550353_98550414_98550768_98550863_98554482_98554594_98556110
ENSMUSG00000003360.16_98549153_98556233_1	chr15	-	752	7	ISM	ENSMUSG00000003360.16	ENSMUST00000003450.15	3187	17	4537	6138	83	-5478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACACCTCCATTGATTAC	NA	NA	NA	NA	NA	NA	NA	NA	98556233	98549152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98549238_98549345_98549480_98549798_98549938_98550353_98550420_98550768_98550863_98554482_98554594_98556110
ENSMUSG00000003363.16_27231425_27242170_1	chr7	-	1833	12	ISM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	10467	0	10467	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATGAGATGGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	27242170	27231424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168
ENSMUSG00000003363.16_27231620_27252576_1	chr7	-	2026	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	61	195	61	-195	multi-exon	FALSE	canonical	NA	NA	NA	NA	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTACTCTCCACTATAC	NA	NA	NA	NA	NA	NA	NA	NA	27252576	27231619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
ENSMUSG00000003363.16_27231724_27252576_1	chr7	-	1922	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	61	299	61	-299	multi-exon	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCAGCCCGACGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	27252576	27231723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
ENSMUSG00000003363.16_27231724_27252576_2	chr7	-	1916	14	NNC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	61	-299	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCAGCCCGACGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	27252576	27231723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237200_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
ENSMUSG00000003363.16_27231724_27252637_2	chr7	-	1983	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	0	299	0	-299	multi-exon	FALSE	canonical	NA	NA	NA	NA	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCAGCCCGACGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	27252637	27231723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
ENSMUSG00000003363.16_27241353_27248505_1	chr7	-	386	4	ISM	ENSMUSG00000003363.16	ENSMUST00000117611.8	2297	14	4138	9928	4132	-9928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAGCAGAGAAGGTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	27248505	27241352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27241414_27241513_27241607_27242168_27242330_27248434
ENSMUSG00000003363.16_27241561_27252477_1	chr7	-	346	4	ISM	ENSMUSG00000003363.16	ENSMUST00000117611.8	2297	14	166	10136	160	-10136	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCAGCGGCCAGGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	27252477	27241560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27241607_27242168_27242330_27248434_27248519_27252422
ENSMUSG00000003380.12_24669387_24671229_1	chr7	-	92	2	ISM	ENSMUSG00000003380.12	ENST00000601891.5	509	4	784	88	784	-88	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGCAGATGGCGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	24671229	24669386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_24669435_24671185
ENSMUSG00000003380.12_24671185_24671977_1	chr7	-	338	3	ISM	ENSMUSG00000003380.12	ENST00000601891.5	509	4	36	1886	36	-1886	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	621	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAATCTCCTGCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	24671977	24671184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_24671284_24671526_24671740_24671951
ENSMUSG00000003380.12_24671526_24672081_1	chr7	-	344	2	ISM	ENSMUSG00000003380.12	ENST00000601891.5	509	4	-68	2227	-18	-2227	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGCCTCTGCGGCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	24672081	24671525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_24671740_24671951
ENSMUSG00000003402.15_21915022_21922525_1	chr9	+	697	8	ISM	ENSMUSG00000003402.15	ENST00000587327.5	1490	15	60	1934	60	-1934	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGGACAAGTACCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	21915021	21922525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462
ENSMUSG00000003402.15_21915793_21922840_1	chr9	+	761	8	ISM	ENSMUSG00000003402.15	ENST00000587327.5	1490	15	831	1619	831	-1619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAGGAGGAGGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	21915792	21922840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733
ENSMUSG00000003402.15_21917833_21923066_1	chr9	+	728	7	ISM	ENSMUSG00000003402.15	ENST00000587327.5	1490	15	2871	1393	2871	-1393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGAGGAGCTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	21917832	21923066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922999
ENSMUSG00000003402.15_21919536_21923608_1	chr9	+	775	8	ISM	ENSMUSG00000003402.15	ENST00000587327.5	1490	15	4574	851	4574	-851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGCACTGGAGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	21919535	21923608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922999_21923067_21923329_21923400_21923514
ENSMUSG00000003402.15_21919647_21924033_1	chr9	+	719	9	ISM	ENSMUSG00000003402.15	ENST00000587327.5	1490	15	4685	426	4685	-426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGACCAGCCTGGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	21919646	21924033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922999_21923067_21923329_21923400_21923514_21923605_21923974
ENSMUSG00000003402.15_21921849_21924350_1	chr9	+	737	9	ISM	ENSMUSG00000003402.15	ENST00000587327.5	1490	15	6887	109	6887	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACGGAGCCCAGTCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	21921848	21924350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21921899_21922462_21922550_21922733_21922893_21922999_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311
ENSMUSG00000003402.15_21922460_21924459_1	chr9	+	799	8	ISM	ENSMUSG00000003402.15	ENST00000587327.5	1490	15	7498	0	7498	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTAAGGACGCTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	21922459	21924459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21922550_21922733_21922893_21922999_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311
ENSMUSG00000003411.11_108736397_108799296_1	chr4	+	1965	5	FSM	ENSMUSG00000003411.11	ENSMUST00000106650.9	3327	5	137	1225	0	911	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCTTGGTTATTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	108736396	108799296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_108736416_108747504_108747733_108781102_108781222_108786598_108786724_108797822
ENSMUSG00000003411.11_108747597_108799476_1	chr4	+	2034	4	FSM	ENSMUSG00000003411.11	ENSMUST00000003502.4	1053	4	110	-1091	110	-1045	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAAGGATCAACTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	108747596	108799476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_108747733_108781102_108781222_108786598_108786724_108797822
ENSMUSG00000003420.9_44742488_44752510_1	chr7	-	1297	6	ISM	ENSMUSG00000003420.9	ENSMUST00000003512.9	1770	7	765	74	659	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTGTGTGCATCGTT	NA	NA	NA	NA	NA	NA	NA	NA	44752510	44742487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751837_44752096_44752426
ENSMUSG00000003420.9_44742730_44753168_1	chr7	-	1347	7	FSM	ENSMUSG00000003420.9	ENSMUST00000003512.9	1770	7	107	316	1	-242	multi-exon	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAACTTGCCCCCAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	44753168	44742729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751837_44752096_44752426_44752698_44753063
ENSMUSG00000003420.9_44744586_44751894_1	chr7	-	613	3	ISM	ENSMUSG00000003420.9	ENSMUST00000210642.2	1602	7	1275	2098	1275	-2098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGGCTGCCCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	44751894	44744585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44744854_44751333_44751610_44751825
ENSMUSG00000003420.9_44744649_44751944_1	chr7	-	600	3	ISM	ENSMUSG00000003420.9	ENSMUST00000210642.2	1602	7	1225	2161	1225	-2161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCACCATTATCAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	44751944	44744648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44744854_44751333_44751610_44751825
ENSMUSG00000003421.14_44711853_44727314_1	chr7	+	1521	9	FSM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	-27	320	0	-320	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGTTGAGTTCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	44711852	44727314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ENSMUSG00000003421.14_44723425_44727475_1	chr7	+	1485	7	ISM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	11545	159	11475	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGCAGCAAGCACTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	44723424	44727475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ENSMUSG00000003421.14_44723463_44727634_1	chr7	+	1606	7	ISM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	11583	0	11513	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTTGTTGTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	44723462	44727634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ENSMUSG00000003423.16_44803773_44809135_1	chr7	+	914	9	ISM	ENSMUSG00000003423.16	ENSMUST00000085375.13	1185	10	35	353	35	-353	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAACCGCCTGGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	44803772	44809135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44803965_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104
ENSMUSG00000003423.16_44803773_44809240_1	chr7	+	1019	9	ISM	ENSMUSG00000003423.16	ENSMUST00000085375.13	1185	10	35	248	35	-248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAAGGTACCTGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	44803772	44809240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44803965_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104
ENSMUSG00000003423.16_44803887_44809240_1	chr7	+	905	9	ISM	ENSMUSG00000003423.16	ENSMUST00000085375.13	1185	10	149	248	149	-248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAAGGTACCTGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	44803886	44809240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44803965_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104
ENSMUSG00000003423.16_44803929_44809483_1	chr7	+	989	10	FSM	ENSMUSG00000003423.16	ENSMUST00000085375.13	1185	10	191	5	191	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAGCTCCAGACAATGA	NA	NA	NA	NA	NA	NA	NA	NA	44803928	44809483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44803965_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ENSMUSG00000003423.16_44805728_44809489_1	chr7	+	961	9	ISM	ENSMUSG00000003423.16	ENSMUST00000107811.4	1072	10	361	0	361	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	NA	NA	NA	NA	NA	NA	NA	44805727	44809489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ENSMUSG00000003429.12_44771803_44773863_1	chr7	-	652	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGGAGTCTCATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	44773863	44771802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44771983_44772252_44772383_44772586_44772654_44772842_44772975_44773720
ENSMUSG00000003429.12_44771803_44773863_2	chr7	-	656	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8990	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGGAGTCTCATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	44773863	44771802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44771983_44772252_44772383_44772591_44772663_44772842_44772975_44773720
ENSMUSG00000003429.12_44771803_44773863_3	chr7	-	654	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGGAGTCTCATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	44773863	44771802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44771983_44772259_44772383_44772586_44772663_44772842_44772975_44773720
ENSMUSG00000003429.12_44771803_44773863_4	chr7	-	655	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGGAGTCTCATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	44773863	44771802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772969_44773720
ENSMUSG00000003435.10_28014316_28019538_1	chr7	-	1958	13	ISM	ENSMUSG00000003435.10	ENSMUST00000209141.2	3755	29	18593	-7	18394	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACGAAGAGTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	28019538	28014315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391
ENSMUSG00000003435.10_28014639_28016476_1	chr7	-	857	7	ISM	ENSMUSG00000003435.10	ENSMUST00000209141.2	3755	29	21655	316	21456	-90	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGATGGCATCATCCG	NA	NA	NA	NA	NA	NA	NA	NA	28016476	28014638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410
ENSMUSG00000003435.10_28014840_28016695_1	chr7	-	851	7	ISM	ENSMUSG00000003435.10	ENSMUST00000209141.2	3755	29	21436	517	21237	-291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGAAGGTGGTCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	28016695	28014839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640
ENSMUSG00000003435.10_28015180_28016843_1	chr7	-	863	7	ISM	ENSMUSG00000003435.10	ENSMUST00000209141.2	3755	29	21288	857	21089	-631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCAGACAGGCGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	28016843	28015179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817
ENSMUSG00000003435.10_28015513_28018231_1	chr7	-	847	8	ISM	ENSMUSG00000003435.10	ENSMUST00000209141.2	3755	29	19900	1190	19701	-964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACCAAGTCCAGCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	28018231	28015512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163
ENSMUSG00000003435.10_28016817_28021564_1	chr7	-	907	7	ISM	ENSMUSG00000003435.10	ENST00000402194.6	3318	28	16368	2268	16368	-2268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCATGGCGTGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	28021564	28016816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427
ENSMUSG00000003435.10_28017160_28021738_1	chr7	-	894	7	ISM	ENSMUSG00000003435.10	ENST00000402194.6	3318	28	16194	2611	16194	-2611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGGGTTAGAGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	28021738	28017159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644
ENSMUSG00000003435.10_28018164_28021999_1	chr7	-	918	7	ISM	ENSMUSG00000003435.10	ENST00000402194.6	3318	28	15933	3615	15933	-3615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAATATCAGGGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	28021999	28018163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888
ENSMUSG00000003435.10_28018261_28023194_1	chr7	-	860	8	ISM	ENSMUSG00000003435.10	ENST00000402194.6	3318	28	14738	3712	14738	-3712	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCAGCTTTGCCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	28023194	28018260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150
ENSMUSG00000003435.10_28019438_28025500_1	chr7	-	881	8	ISM	ENSMUSG00000003435.10	ENST00000402194.6	3318	28	12432	4889	12432	-4889	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTACTGTGGGTGTCATCG	NA	NA	NA	NA	NA	NA	NA	NA	28025500	28019437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374
ENSMUSG00000003435.10_28019645_28025626_1	chr7	-	906	7	ISM	ENSMUSG00000003435.10	ENST00000402194.6	3318	28	12306	5096	12306	-5096	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGCCTGGAAGAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	28025626	28019644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374
ENSMUSG00000003435.10_28021644_28029077_1	chr7	-	919	10	ISM	ENSMUSG00000003435.10	ENST00000402194.6	3318	28	8855	7095	8855	-7095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTAGTCCTGGCCTCACG	NA	NA	NA	NA	NA	NA	NA	NA	28029077	28021643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007
ENSMUSG00000003435.10_28021889_28030071_1	chr7	-	891	10	ISM	ENSMUSG00000003435.10	ENST00000402194.6	3318	28	7861	7340	7861	-7340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGATTGGTGGGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	28030071	28021888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28030004
ENSMUSG00000003435.10_28023194_28030881_1	chr7	-	828	10	ISM	ENSMUSG00000003435.10	ENST00000402194.6	3318	28	7051	8645	7051	-8645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCGGCCTCCACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	28030881	28023193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28030004_28030071_28030794
ENSMUSG00000003436.12_27993775_27998496_1	chr7	-	1194	4	ISM	ENSMUSG00000003436.12	ENSMUST00000108315.4	2618	9	3167	797	2499	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGGTGAGGGCGACACA	NA	NA	NA	NA	NA	NA	NA	NA	27998496	27993774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27994349_27995712_27995936_27997943_27998162_27998317
ENSMUSG00000003436.12_27993981_28000784_1	chr7	-	1186	6	ISM	ENSMUSG00000003436.12	ENSMUST00000108315.4	2618	9	879	1003	211	-206	internal_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCGCTTTCTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	28000784	27993980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27994349_27995712_27995936_27997943_27998162_27998317_27998561_27999591_27999650_28000708
ENSMUSG00000003436.12_27994035_28000835_1	chr7	-	1183	6	ISM	ENSMUSG00000003436.12	ENSMUST00000108315.4	2618	9	828	1057	160	-260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGACGGCGCGGACGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	28000835	27994034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27994349_27995712_27995936_27997943_27998162_27998317_27998561_27999591_27999650_28000708
ENSMUSG00000003436.12_27994110_28000920_1	chr7	-	1193	6	ISM	ENSMUSG00000003436.12	ENSMUST00000108315.4	2618	9	743	1132	75	-335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGCCCACTTCTCTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	28000920	27994109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27994349_27995712_27995936_27997943_27998162_27998317_27998561_27999591_27999650_28000708
ENSMUSG00000003437.15_28092466_28094964_1	chr7	+	429	3	ISM	ENSMUSG00000003437.15	ENST00000595564.5	1805	13	113	3842	90	-3842	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGGGGAGACAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	28092465	28094964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28092680_28094467_28094561_28094842
ENSMUSG00000003437.15_28092466_28098664_1	chr7	+	1764	14	FSM	ENSMUSG00000003437.15	ENSMUST00000003529.9	2003	14	90	149	90	-142	multi-exon	FALSE	canonical	NA	NA	NA	NA	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGATTGAGCCTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	28092465	28098664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ENSMUSG00000003437.15_28092466_28098664_2	chr7	+	1762	13	NNC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	90	-142	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGATTGAGCCTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	28092465	28098664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_28092680_28094439_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ENSMUSG00000003437.15_28092586_28098813_1	chr7	+	1791	13	NNC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	210	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTAAAGTCTCTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	28092585	28098813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_28092680_28094439_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ENSMUSG00000003437.15_28092586_28098813_2	chr7	+	1793	14	FSM	ENSMUSG00000003437.15	ENSMUST00000003529.9	2003	14	210	0	210	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTAAAGTCTCTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	28092585	28098813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ENSMUSG00000003437.15_28096076_28098174_1	chr7	+	402	4	ISM	ENSMUSG00000003437.15	ENSMUST00000003529.9	2003	14	3700	639	3700	-632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGGATTAGTCACATCC	NA	NA	NA	NA	NA	NA	NA	NA	28096075	28098174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28096152_28096245_28096375_28097872_28097979_28098083
ENSMUSG00000003437.15_28096076_28098485_1	chr7	+	453	5	ISM	ENSMUSG00000003437.15	ENST00000595564.5	1805	13	3723	321	3700	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCACAGGGGCAGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	28096075	28098485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098434
ENSMUSG00000003437.15_28096246_28098485_1	chr7	+	377	4	ISM	ENSMUSG00000003437.15	ENST00000595564.5	1805	13	3893	321	3870	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCACAGGGGCAGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	28096245	28098485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28096375_28097872_28097979_28098083_28098175_28098434
ENSMUSG00000003437.15_28097859_28098608_1	chr7	+	385	3	ISM	ENSMUSG00000003437.15	ENST00000595564.5	1805	13	5506	198	5483	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCAGGAAGATGGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	28097858	28098608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28097979_28098083_28098175_28098434
ENSMUSG00000003438.18_28004941_28007837_1	chr7	-	1162	7	ISM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	3660	0	3636	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCGTGTGTGGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	28007837	28004940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778
ENSMUSG00000003438.18_28004941_28009525_1	chr7	-	1184	8	ISM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	1972	0	1948	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCGTGTGTGGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	28009525	28004940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503
ENSMUSG00000003438.18_28005069_28009752_1	chr7	-	1088	9	ISM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	1745	128	1721	107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGTTGGCAAAGAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	28009752	28005068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720
ENSMUSG00000003438.18_28005249_28011462_1	chr7	-	1172	10	FSM	ENSMUSG00000003438.18	ENST00000607714.6	1256	10	11	73	11	-73	multi-exon	FALSE	canonical	NA	NA	NA	NA	2463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	28011462	28005248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009698_28009753_28010293_28010445_28011349
ENSMUSG00000003438.18_28005249_28011462_2	chr7	-	1166	10	NNC	ENSMUSG00000003438.18	novel	1256	10	NA	NA	11	-73	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1830	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	28011462	28005248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_28005450_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009698_28009753_28010293_28010445_28011349
ENSMUSG00000003438.18_28005249_28011462_3	chr7	-	1160	10	NNC	ENSMUSG00000003438.18	novel	1256	10	NA	NA	11	-73	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	28011462	28005248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007681_28007778_28007838_28009698_28009753_28010293_28010445_28011349
ENSMUSG00000003438.18_28005249_28011462_4	chr7	-	1166	10	NNC	ENSMUSG00000003438.18	novel	1256	10	NA	NA	11	-73	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	28011462	28005248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006983_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009698_28009753_28010293_28010445_28011349
ENSMUSG00000003438.18_28005249_28011462_5	chr7	-	1159	10	NNC	ENSMUSG00000003438.18	novel	1256	10	NA	NA	11	-73	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	28011462	28005248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009711_28009753_28010293_28010445_28011349
ENSMUSG00000003438.18_28005249_28011462_6	chr7	-	1172	11	FSM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	35	308	11	-73	multi-exon	FALSE	canonical	NA	NA	NA	NA	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	28011462	28005248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ENSMUSG00000003444.9_28086092_28092133_1	chr7	-	688	4	NNC	ENSMUSG00000003444.9	novel	674	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGCAGACAGCACAGACC	NA	NA	NA	NA	NA	NA	NA	NA	28092133	28086091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_28086380_28090236_28090322_28090516_28090574_28091875
ENSMUSG00000003444.9_28086092_28092133_2	chr7	-	690	4	FSM	ENSMUSG00000003444.9	ENST00000594368.5	674	4	-16	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGCAGACAGCACAGACC	NA	NA	NA	NA	NA	NA	NA	NA	28092133	28086091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28086380_28090236_28090322_28090514_28090574_28091875
ENSMUSG00000003444.9_28086092_28092133_3	chr7	-	689	4	NNC	ENSMUSG00000003444.9	novel	674	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGCAGACAGCACAGACC	NA	NA	NA	NA	NA	NA	NA	NA	28092133	28086091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_28086380_28090237_28090322_28090514_28090574_28091875
ENSMUSG00000003444.9_28086092_28092133_4	chr7	-	686	4	NNC	ENSMUSG00000003444.9	novel	674	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGCAGACAGCACAGACC	NA	NA	NA	NA	NA	NA	NA	NA	28092133	28086091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_28086380_28090236_28090318_28090514_28090574_28091875
ENSMUSG00000003444.9_28086280_28091939_1	chr7	-	378	4	FSM	ENSMUSG00000003444.9	ENSMUST00000003536.9	1281	4	194	709	178	-188	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGGACTGTGCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	28091939	28086279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28086450_28090236_28090322_28090514_28090574_28091875
ENSMUSG00000003444.9_28086335_28091986_1	chr7	-	370	4	FSM	ENSMUSG00000003444.9	ENSMUST00000003536.9	1281	4	147	764	131	-243	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACCTGGCTGTCATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	28091986	28086334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28086450_28090236_28090322_28090514_28090574_28091875
ENSMUSG00000003452.16_149310927_149311875_1	chr6	+	843	2	FSM	ENSMUSG00000003452.16	ENST00000550207.1	846	2	3	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATGTTCTGTGAATAACA	NA	NA	NA	NA	NA	NA	NA	NA	149310926	149311875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_149311140_149311245
ENSMUSG00000003458.13_171893580_171894989_1	chr1	-	876	2	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	15373	0	15373	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGTTTGGTATTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	171894989	171893579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171894364_171894897
ENSMUSG00000003458.13_171893697_171895060_1	chr1	-	830	2	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	15302	117	15302	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTTTTTATTATTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	171895060	171893696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171894364_171894897
ENSMUSG00000003458.13_171893818_171895420_1	chr1	-	824	3	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	14942	238	14942	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATTCCCTGGCTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	171895420	171893817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171894364_171894897_171895111_171895355
ENSMUSG00000003458.13_171893966_171896159_1	chr1	-	885	5	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	14203	386	14203	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTCCTTCCATCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	171896159	171893965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128
ENSMUSG00000003458.13_171894052_171896184_1	chr1	-	824	5	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	14178	472	14178	-472	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTCTAATCCCAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	171896184	171894051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128
ENSMUSG00000003458.13_171894114_171896224_1	chr1	-	802	5	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	14138	534	14138	-534	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAACTGTGAGTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	171896224	171894113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128
ENSMUSG00000003458.13_171894267_171897715_1	chr1	-	925	7	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	12647	687	12647	-687	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCCAGGAGCTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	171897715	171894266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542
ENSMUSG00000003458.13_171894970_171899052_1	chr1	-	855	8	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	11310	1390	11310	-1390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACGTGGGCGGAGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	171899052	171894969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031
ENSMUSG00000003458.13_171895043_171899089_1	chr1	-	819	8	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	11273	1463	11273	-1463	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTCCACAGTGCGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	171899089	171895042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031
ENSMUSG00000003458.13_171895096_171899136_1	chr1	-	813	8	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	11226	1516	11226	-1516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTACAAGGCCCTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	171899136	171895095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031
ENSMUSG00000003458.13_171895437_171899788_1	chr1	-	818	8	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	10574	1857	10574	-1857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAACCTGACTGGCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	171899788	171895436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687
ENSMUSG00000003458.13_171895437_171899840_1	chr1	-	870	8	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	10522	1857	10522	-1857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAACCTGACTGGCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	171899840	171895436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687
ENSMUSG00000003458.13_171895753_171900142_1	chr1	-	906	8	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	10220	2173	10220	-2173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCATCTGCTGTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	171900142	171895752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032
ENSMUSG00000003458.13_171896172_171900414_1	chr1	-	846	8	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	9948	2592	9948	-2592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAACCAACTTCAGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	171900414	171896171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343
ENSMUSG00000003458.13_171896386_171901858_1	chr1	-	835	8	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	8504	2806	8504	-2806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGAGTGGCAGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	171901858	171896385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839
ENSMUSG00000003458.13_171897541_171901985_1	chr1	-	918	7	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	8377	3961	8377	-3961	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACCTGGCTCTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	171901985	171897540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839
ENSMUSG00000003458.13_171897663_171902504_1	chr1	-	819	8	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	7858	4083	7858	-4083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGAGGAGACTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	171902504	171897662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481
ENSMUSG00000003458.13_171899029_171903102_1	chr1	-	921	7	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	7260	5449	7260	-5449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTCCTCCACCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	171903102	171899028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971
ENSMUSG00000003458.13_171899687_171908883_1	chr1	-	912	7	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	1479	6107	1479	-6107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGCTTTCTGCCTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	171908883	171899686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778
ENSMUSG00000003458.13_171899811_171910215_1	chr1	-	836	8	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	147	6231	147	-6231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGGGGCTGAAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	171910215	171899810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ENSMUSG00000003458.13_171900061_171910362_1	chr1	-	925	7	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	0	6481	0	-6481	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCAGGGTTGTGGTTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	171910362	171900060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ENSMUSG00000003458.13_171900126_171910362_1	chr1	-	860	7	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	0	6546	0	-6546	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCCGACTACAACGTATG	NA	NA	NA	NA	NA	NA	NA	NA	171910362	171900125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ENSMUSG00000003464.14_171954322_171957554_1	chr1	+	456	4	ISM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	0	5296	0	-5296	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGGGAAGGAGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	171954321	171957554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468
ENSMUSG00000003464.14_171956236_171958267_1	chr1	+	413	4	ISM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	1914	4583	1907	-4583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAGAGCATCATGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	171956235	171958267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171956308_171956721_171956888_171957468_171957555_171958178
ENSMUSG00000003464.14_171956774_171960738_1	chr1	+	404	4	ISM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	2452	2112	2445	-2112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGTTTGAGAAGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	171956773	171960738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171956888_171957468_171957555_171958178_171958341_171960696
ENSMUSG00000003464.14_171956821_171960794_1	chr1	+	413	4	ISM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	2499	2056	2492	-2056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAGGCCGAGACGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	171956820	171960794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171956888_171957468_171957555_171958178_171958341_171960696
ENSMUSG00000003464.14_171956858_171960858_1	chr1	+	440	4	ISM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	2536	1992	2529	-1992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCATGCAGCAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	171956857	171960858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171956888_171957468_171957555_171958178_171958341_171960696
ENSMUSG00000003464.14_171957468_171961611_1	chr1	+	471	4	ISM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	3146	1239	3139	-1239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTTGTCTTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	171957467	171961611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171957555_171958178_171958341_171960696_171960874_171961566
ENSMUSG00000003476.17_55068198_55094553_1	chr6	-	1224	11	ISM	ENSMUSG00000003476.17	ENSMUST00000114374.9	1440	12	345	0	345	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTCCTCCTTGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	55094553	55068197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_55068404_55069497_55069540_55069936_55070073_55070263_55070350_55076196_55076270_55077047_55077109_55077606_55077761_55079735_55079854_55080152_55080260_55081708_55081795_55094398
ENSMUSG00000003476.17_55068198_55100604_1	chr6	-	1311	12	NIC	ENSMUSG00000003476.17	novel	1379	12	NA	NA	127	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTCCTCCTTGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	55100604	55068197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_55068404_55069497_55069540_55069936_55070073_55070263_55070350_55076196_55076270_55077047_55077109_55077606_55077761_55079735_55079854_55080152_55080260_55081708_55081795_55094398_55094554_55100517
ENSMUSG00000003476.17_55068333_55100609_1	chr6	-	1181	12	NIC	ENSMUSG00000003476.17	novel	1379	12	NA	NA	122	-73	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATGTCCATCCCTACGT	NA	NA	NA	NA	NA	NA	NA	NA	55100609	55068332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_55068404_55069497_55069540_55069936_55070073_55070263_55070350_55076196_55076270_55077047_55077109_55077606_55077761_55079735_55079854_55080152_55080260_55081708_55081795_55094398_55094554_55100517
ENSMUSG00000003476.17_55069496_55100604_1	chr6	-	1110	11	ISM	ENSMUSG00000003476.17	ENST00000341843.8	1379	12	127	1236	127	-485	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGACAGGGCCTTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	55100604	55069495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_55069540_55069936_55070073_55070263_55070350_55076196_55076270_55077047_55077109_55077606_55077761_55079735_55079854_55080152_55080263_55081708_55081795_55094398_55094554_55100517
ENSMUSG00000003500.14_29200436_29203245_1	chr6	-	1156	4	ISM	ENSMUSG00000003500.14	ENST00000407347.2	1209	13	6022	-762	6022	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGATCCTGTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	29203245	29200435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100
ENSMUSG00000003500.14_29200585_29204373_1	chr6	-	1247	6	ISM	ENSMUSG00000003500.14	ENSMUST00000160878.8	2314	13	7875	149	4894	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCCTGATTCACCACC	NA	NA	NA	NA	NA	NA	NA	NA	29204373	29200584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277
ENSMUSG00000003500.14_29200714_29204653_1	chr6	-	1204	7	ISM	ENSMUSG00000003500.14	ENSMUST00000160878.8	2314	13	7595	278	4614	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCTGGACCTAGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	29204653	29200713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567
ENSMUSG00000003500.14_29201019_29206136_1	chr6	-	1176	9	ISM	ENSMUSG00000003500.14	ENSMUST00000160878.8	2314	13	6112	583	3131	179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCAGGTAGCCCCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	29206136	29201018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064
ENSMUSG00000003500.14_29201144_29206438_1	chr6	-	1201	10	ISM	ENSMUSG00000003500.14	ENSMUST00000160878.8	2314	13	5810	708	2829	54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAACAGCCTCCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	29206438	29201143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304
ENSMUSG00000003500.14_29202680_29207108_1	chr6	-	1190	10	ISM	ENSMUSG00000003500.14	ENSMUST00000078155.12	2437	14	5188	2244	2159	-1482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATCTGTCCTGCGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	29207108	29202679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093
ENSMUSG00000003500.14_29202752_29207148_1	chr6	-	1158	10	ISM	ENSMUSG00000003500.14	ENSMUST00000078155.12	2437	14	5148	2316	2119	-1554	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTCAGAAGTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	29207148	29202751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093
ENSMUSG00000003500.14_29203188_29212248_1	chr6	-	1291	11	ISM	ENSMUSG00000003500.14	ENSMUST00000078155.12	2437	14	48	2752	0	-1990	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGGGTGAGGCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	29212248	29203187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067
ENSMUSG00000003500.14_29203195_29212248_1	chr6	-	1284	11	ISM	ENSMUSG00000003500.14	ENSMUST00000078155.12	2437	14	48	2759	0	-1997	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCAGATGGGGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	29212248	29203194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067
ENSMUSG00000003500.14_29203399_29212248_1	chr6	-	1176	10	NNC	ENSMUSG00000003500.14	novel	2437	14	NA	NA	0	-2201	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGACCGTGGGCCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	29212248	29203398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206927_29206997_29207093_29207196_29209218_29209268_29212067
ENSMUSG00000003500.14_29204278_29216168_1	chr6	-	1218	10	ISM	ENSMUSG00000003500.14	ENST00000338791.11	2649	15	128	3845	128	-3080	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTATCCGCAGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	29216168	29204277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212280_29216070
ENSMUSG00000003500.14_29204561_29216276_1	chr6	-	1237	9	ISM	ENSMUSG00000003500.14	ENST00000338791.11	2649	15	20	4128	20	-3363	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGGCCCCCCTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	29216276	29204560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212280_29216070
ENSMUSG00000003518.14_101862105_101872514_1	chr11	-	3733	2	ISM	ENSMUSG00000003518.14	ENSMUST00000151678.8	4084	3	1815	136	1815	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCAGAGCACTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	101872514	101862104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101865766_101872442
ENSMUSG00000003518.14_101862212_101872570_1	chr11	-	3682	2	ISM	ENSMUSG00000003518.14	ENSMUST00000151678.8	4084	3	1759	243	1759	-243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGATATTTAACTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	101872570	101862211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101865766_101872442
ENSMUSG00000003518.14_101862367_101875577_1	chr11	-	3766	3	FSM	ENSMUSG00000003518.14	ENSMUST00000003612.13	4212	3	48	398	0	-398	multi-exon	FALSE	canonical	NA	NA	NA	NA	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCTTAAGTTGCTTATA	NA	NA	NA	NA	NA	NA	NA	NA	101875577	101862366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101865766_101872442_101872670_101875437
ENSMUSG00000003518.14_101863162_101874329_1	chr11	-	2891	3	FSM	ENSMUSG00000003518.14	ENSMUST00000151678.8	4084	3	0	1193	0	-1193	multi-exon	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCACATGACTTTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	101874329	101863161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101865766_101872442_101872670_101874269
ENSMUSG00000003518.14_101864633_101877709_1	chr11	-	1651	5	FSM	ENSMUSG00000003518.14	ENSMUST00000107172.8	4445	5	130	2664	130	909	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGGAACCTAGCCAATT	NA	NA	NA	NA	NA	NA	NA	NA	101877709	101864632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101865766_101872442_101872670_101875437_101875578_101876947_101877082_101877692
ENSMUSG00000003518.14_101864699_101877839_1	chr11	-	1715	5	FSM	ENSMUSG00000003518.14	ENSMUST00000107172.8	4445	5	0	2730	0	843	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGTGAGTTCAAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	101877839	101864698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101865766_101872442_101872670_101875437_101875578_101876947_101877082_101877692
ENSMUSG00000003518.14_101864761_101877839_1	chr11	-	1653	5	FSM	ENSMUSG00000003518.14	ENSMUST00000107172.8	4445	5	0	2792	0	781	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAACAAACAAACAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	101877839	101864760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101865766_101872442_101872670_101875437_101875578_101876947_101877082_101877692
ENSMUSG00000003518.14_101865347_101877839_1	chr11	-	933	4	FSM	ENSMUSG00000003518.14	ENSMUST00000107173.9	4311	4	0	3378	0	195	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGAGGTGAGGTTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	101877839	101865346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101865766_101872442_101872670_101875437_101875578_101877692
ENSMUSG00000003526.13_17889990_17898147_1	chr16	-	1119	9	NNC	ENSMUSG00000003526.13	novel	1514	12	NA	NA	4463	45	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTTCAGGCGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	17898147	17889989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_17890228_17890313_17890396_17891414_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029
ENSMUSG00000003526.13_17889990_17898147_2	chr16	-	1117	9	NNC	ENSMUSG00000003526.13	novel	1514	12	NA	NA	4463	45	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTTCAGGCGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	17898147	17889989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897851_17898029
ENSMUSG00000003526.13_17889990_17898147_3	chr16	-	1117	9	NNC	ENSMUSG00000003526.13	novel	1514	12	NA	NA	4463	45	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTTCAGGCGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	17898147	17889989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_17890223_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029
ENSMUSG00000003526.13_17889990_17898147_4	chr16	-	1116	9	NNC	ENSMUSG00000003526.13	novel	1514	12	NA	NA	4463	45	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTTCAGGCGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	17898147	17889989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897781_17897856_17898029
ENSMUSG00000003526.13_17889990_17898391_1	chr16	-	1186	10	ISM	ENSMUSG00000003526.13	ENST00000334029.6	1514	12	4219	-45	4219	45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTTCAGGCGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	17898391	17889989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326
ENSMUSG00000003526.13_17890120_17898826_1	chr16	-	1093	11	ISM	ENSMUSG00000003526.13	ENST00000334029.6	1514	12	3784	85	3784	-85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCGAGAGAGGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	17898826	17890119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789
ENSMUSG00000003526.13_17890120_17898841_1	chr16	-	1108	11	ISM	ENSMUSG00000003526.13	ENST00000334029.6	1514	12	3769	85	3769	-85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCGAGAGAGGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	17898841	17890119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789
ENSMUSG00000003526.13_17890120_17898917_1	chr16	-	1184	11	ISM	ENSMUSG00000003526.13	ENST00000334029.6	1514	12	3693	85	3693	-85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCGAGAGAGGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	17898917	17890119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789
ENSMUSG00000003526.13_17890382_17902424_1	chr16	-	1067	11	ISM	ENSMUSG00000003526.13	ENST00000334029.6	1514	12	186	347	186	-347	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGATGGTCAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	17902424	17890381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898963_17902410
ENSMUSG00000003526.13_17891457_17902486_1	chr16	-	1070	10	ISM	ENSMUSG00000003526.13	ENST00000334029.6	1514	12	124	1422	124	-1422	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCACAACGAGGACACCGT	NA	NA	NA	NA	NA	NA	NA	NA	17902486	17891456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898963_17902410
ENSMUSG00000003526.13_17891504_17902543_1	chr16	-	1080	10	ISM	ENSMUSG00000003526.13	ENST00000334029.6	1514	12	67	1469	67	-1469	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGAGGAGCTGAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	17902543	17891503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898963_17902410
ENSMUSG00000003527.10_17718833_17724242_1	chr16	-	1689	4	ISM	ENSMUSG00000003527.10	ENSMUST00000232423.2	2785	10	4937	260	4937	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTCAATTGAATTACCTC	NA	NA	NA	NA	NA	NA	NA	NA	17724242	17718832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134
ENSMUSG00000003527.10_17719237_17725732_1	chr16	-	1651	7	ISM	ENSMUSG00000003527.10	ENSMUST00000232423.2	2785	10	3447	664	3447	-664	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCAGGCTCCCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	17725732	17719236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613
ENSMUSG00000003527.10_17719406_17727989_1	chr16	-	1667	9	ISM	ENSMUSG00000003527.10	ENSMUST00000232423.2	2785	10	1190	833	1190	-833	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGCTCACCAGGACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	17727989	17719405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725784_17727768_17727865_17727951
ENSMUSG00000003527.10_17725049_17729051_1	chr16	-	637	6	ISM	ENSMUSG00000003527.10	ENSMUST00000232423.2	2785	10	128	6476	128	-6476	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTCCTCCGAGATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	17729051	17725048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17725107_17725383_17725502_17725613_17725784_17727768_17727865_17727951_17728121_17729025
ENSMUSG00000003527.10_17725381_17729179_1	chr16	-	710	5	ISM	ENSMUSG00000003527.10	ENSMUST00000232423.2	2785	10	0	6808	0	-6808	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGAACAAGGCAGAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	17729179	17725380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17725502_17725613_17725784_17727768_17727865_17727951_17728121_17729025
ENSMUSG00000003528.16_17743720_17744120_1	chr16	-	214	3	ISM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	1963	633	1963	-633	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTGGTGAAGCTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	17744120	17743719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17743792_17743893_17743968_17744052
ENSMUSG00000003528.16_17744130_17744604_1	chr16	-	229	3	ISM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	1479	1043	1479	-1043	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTTTGGAGCTACTGCG	NA	NA	NA	NA	NA	NA	NA	NA	17744604	17744129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17744169_17744298_17744404_17744519
ENSMUSG00000003528.16_17744338_17745091_1	chr16	-	225	3	ISM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	992	1251	992	-1251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTTGTCATGACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	17745091	17744337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17744404_17744519_17744605_17745017
ENSMUSG00000003531.16_17884267_17889227_1	chr16	+	1076	5	NNC	ENSMUSG00000003531.16	novel	1086	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTTCCTAGTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	17884266	17889227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_17884464_17884569_17884721_17887287_17887389_17887954_17888096_17888741
ENSMUSG00000003531.16_17884267_17889227_2	chr16	+	1079	5	NNC	ENSMUSG00000003531.16	novel	1086	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTTCCTAGTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	17884266	17889227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_17884464_17884559_17884721_17887294_17887389_17887954_17888096_17888741
ENSMUSG00000003534.18_35992462_35993666_1	chr17	-	1100	2	ISM	ENSMUSG00000003534.18	ENST00000446312.5	3126	15	11143	-22	11143	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGGTGTATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	35993666	35992461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35993411_35993515
ENSMUSG00000003534.18_35992972_35996014_1	chr17	-	1171	5	ISM	ENSMUSG00000003534.18	ENST00000446312.5	3126	15	8795	488	8795	-488	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCCCACTGGACAACAC	NA	NA	NA	NA	NA	NA	NA	NA	35996014	35992971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886
ENSMUSG00000003534.18_35993124_35998091_1	chr17	-	1074	6	ISM	ENSMUSG00000003534.18	ENST00000446312.5	3126	15	6718	640	6718	-640	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGAGGAGCAGATACACAC	NA	NA	NA	NA	NA	NA	NA	NA	35998091	35993123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35998036
ENSMUSG00000003534.18_35993323_35999719_1	chr17	-	1098	8	ISM	ENSMUSG00000003534.18	ENST00000446312.5	3126	15	5090	839	5090	-839	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCGCCCAGCTTCATCGG	NA	NA	NA	NA	NA	NA	NA	NA	35999719	35993322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35998036_35998121_35999430_35999583_35999677
ENSMUSG00000003534.18_35993545_36000609_1	chr17	-	1074	8	ISM	ENSMUSG00000003534.18	ENST00000446312.5	3126	15	4200	1061	4200	-1061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTTCTTCAGGGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	36000609	35993544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35998036_35998121_35999430_35999583_35999677_35999762_36000558
ENSMUSG00000003534.18_35993596_36000673_1	chr17	-	1087	8	ISM	ENSMUSG00000003534.18	ENST00000446312.5	3126	15	4136	1112	4136	-1112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCAGCCCTTTGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	36000673	35993595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35998036_35998121_35999430_35999583_35999677_35999762_36000558
ENSMUSG00000003534.18_35994328_36000808_1	chr17	-	1153	7	ISM	ENSMUSG00000003534.18	ENST00000446312.5	3126	15	4001	1844	4001	-1844	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCTGCCAAAAGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	36000808	35994327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35994564_35994986_35995206_35995886_35996015_35998036_35998121_35999430_35999583_35999677_35999762_36000558
ENSMUSG00000003534.18_35994437_36000910_1	chr17	-	1066	8	ISM	ENSMUSG00000003534.18	ENST00000446312.5	3126	15	3899	1953	3899	-1953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCCGACTTTGGCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	36000910	35994436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35994564_35994986_35995206_35995886_35996015_35998036_35998121_35999430_35999583_35999677_35999762_36000558_36000806_36000885
ENSMUSG00000003534.18_35994474_36000987_1	chr17	-	1106	8	ISM	ENSMUSG00000003534.18	ENST00000446312.5	3126	15	3822	1990	3822	-1990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGAACTGCTTGGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	36000987	35994473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35994564_35994986_35995206_35995886_35996015_35998036_35998121_35999430_35999583_35999677_35999762_36000558_36000806_36000885
ENSMUSG00000003534.18_35994529_35998099_1	chr17	-	690	5	ISM	ENSMUSG00000003534.18	ENST00000376569.7	3594	17	13364	2045	6710	-2045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGGCATGCGTTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	35998099	35994528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036
ENSMUSG00000003534.18_35994535_36001028_1	chr17	-	1086	8	ISM	ENSMUSG00000003534.18	ENST00000446312.5	3126	15	3781	2051	3781	-2051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCGCCTCTGGCATGCGT	NA	NA	NA	NA	NA	NA	NA	NA	36001028	35994534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35994564_35994986_35995206_35995886_35996015_35998036_35998121_35999430_35999583_35999677_35999762_36000558_36000806_36000885
ENSMUSG00000003534.18_35995060_35999448_1	chr17	-	703	5	ISM	ENSMUSG00000003534.18	ENST00000376569.7	3594	17	12015	2576	5361	-2576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGCCAGCTGGAGAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	35999448	35995059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430
ENSMUSG00000003534.18_35995115_35999504_1	chr17	-	704	5	ISM	ENSMUSG00000003534.18	ENST00000376569.7	3594	17	11959	2631	5305	-2631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGCATGATCACAGACTA	NA	NA	NA	NA	NA	NA	NA	NA	35999504	35995114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430
ENSMUSG00000003534.18_35995155_36002380_1	chr17	-	1078	9	ISM	ENSMUSG00000003534.18	ENST00000446312.5	3126	15	2429	2671	2429	-2671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATCCGGCTCCTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	36002380	35995154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35995206_35995886_35996015_35998036_35998121_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338
ENSMUSG00000003534.18_35995172_35999554_1	chr17	-	697	5	ISM	ENSMUSG00000003534.18	ENST00000376569.7	3594	17	11909	2688	5255	-2688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGCTGAAGGACCCAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	35999554	35995171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430
ENSMUSG00000003534.18_35995972_36003800_1	chr17	-	1101	9	ISM	ENSMUSG00000003534.18	ENST00000446312.5	3126	15	1009	3488	1009	-3488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTCCCTATCAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	36003800	35995971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35996015_35998036_35998121_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747
ENSMUSG00000003534.18_35996198_36000676_1	chr17	-	765	5	ISM	ENSMUSG00000003534.18	ENST00000376569.7	3594	17	10787	3714	4133	-3714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGAGGATGCCTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	36000676	35996197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35996443_35998036_35998203_35999430_35999583_35999677_35999762_36000558
ENSMUSG00000003534.18_35996311_36000728_1	chr17	-	704	5	ISM	ENSMUSG00000003534.18	ENST00000376569.7	3594	17	10735	3827	4081	-3827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTGTGCCTGCACTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	36000728	35996310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35996443_35998036_35998203_35999430_35999583_35999677_35999762_36000558
ENSMUSG00000003534.18_35996342_36000800_1	chr17	-	745	5	ISM	ENSMUSG00000003534.18	ENST00000376569.7	3594	17	10663	3858	4009	-3858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGCAGGGCGTCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	36000800	35996341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35996443_35998036_35998203_35999430_35999583_35999677_35999762_36000558
ENSMUSG00000003534.18_35999430_36003976_1	chr17	-	1151	7	ISM	ENSMUSG00000003534.18	ENST00000446312.5	3126	15	833	6946	833	-6946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCGGGGCTGTGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	36003976	35999429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747
ENSMUSG00000003546.11_46941550_46955309_1	chr17	-	2136	15	ISM	ENSMUSG00000003546.11	ENSMUST00000003642.7	2322	16	761	-7	126	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCGGAGTCTTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	46955309	46941549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174
ENSMUSG00000003546.11_46941734_46956948_1	chr17	-	2129	16	FSM	ENSMUSG00000003546.11	ENSMUST00000233974.2	2313	16	0	184	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAGGCTCCCAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	46956948	46941733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956900
ENSMUSG00000003546.11_46941745_46947666_1	chr17	-	1030	9	ISM	ENSMUSG00000003546.11	ENST00000453940.6	1847	14	7769	11	7769	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGTAGCTGACTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	46947666	46941744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545
ENSMUSG00000003546.11_46941899_46947908_1	chr17	-	999	10	ISM	ENSMUSG00000003546.11	ENST00000453940.6	1847	14	7527	165	7527	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCATGGCTCCTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	46947908	46941898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838
ENSMUSG00000003546.11_46943675_46951036_1	chr17	-	1059	9	ISM	ENSMUSG00000003546.11	ENST00000453940.6	1847	14	4399	1941	4399	-1941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTGCTCACTACTACT	NA	NA	NA	NA	NA	NA	NA	NA	46951036	46943674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816
ENSMUSG00000003546.11_46946400_46955309_1	chr17	-	1070	10	ISM	ENSMUSG00000003546.11	ENST00000453940.6	1847	14	126	4666	126	-4666	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCAGGGGAAGCTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	46955309	46946399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46955174
ENSMUSG00000003549.10_19078703_19090449_1	chr7	+	1367	10	NNC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	548	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	19078702	19090449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090351
ENSMUSG00000003549.10_19078703_19090449_2	chr7	+	1368	10	NNC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	19078702	19090449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_19079122_19079537_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
ENSMUSG00000003549.10_19078703_19090449_3	chr7	+	1370	10	NNC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	19078702	19090449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088255_19088351_19089025_19089098_19089217_19089287_19090343
ENSMUSG00000003549.10_19078703_19090449_4	chr7	+	1369	10	NNC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	19078702	19090449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_19079122_19079530_19079643_19082331_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
ENSMUSG00000003555.9_46655760_46661299_1	chr19	-	1456	7	NNC	ENSMUSG00000003555.9	novel	1484	7	NA	NA	26	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATCTAACGTCCCGGATC	NA	NA	NA	NA	NA	NA	NA	NA	46661299	46655759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_46656048_46656452_46656557_46657110_46657275_46657580_46657801_46658976_46659207_46659395_46659532_46660985
ENSMUSG00000003555.9_46655760_46661299_2	chr19	-	1458	7	FSM	ENSMUSG00000003555.9	ENST00000638971.1	1484	7	26	0	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATCTAACGTCCCGGATC	NA	NA	NA	NA	NA	NA	NA	NA	46661299	46655759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_46656048_46656452_46656557_46657110_46657281_46657584_46657801_46658976_46659207_46659395_46659532_46660985
ENSMUSG00000003555.9_46655888_46659020_1	chr19	-	478	4	ISM	ENSMUSG00000003555.9	ENST00000638190.1	1268	6	2305	128	2305	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGACAAACAGCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	46659020	46655887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46656048_46656452_46656557_46657110_46657281_46658976
ENSMUSG00000003555.9_46655938_46659072_1	chr19	-	480	4	ISM	ENSMUSG00000003555.9	ENST00000638190.1	1268	6	2253	178	2253	-178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTATCTTCATGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	46659072	46655937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46656048_46656452_46656557_46657110_46657281_46658976
ENSMUSG00000003555.9_46655988_46659125_1	chr19	-	483	4	ISM	ENSMUSG00000003555.9	ENST00000638190.1	1268	6	2200	228	2200	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGCTGGTCCCCGATCG	NA	NA	NA	NA	NA	NA	NA	NA	46659125	46655987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46656048_46656452_46656557_46657110_46657281_46658976
ENSMUSG00000003555.9_46656526_46659438_1	chr19	-	474	4	ISM	ENSMUSG00000003555.9	ENST00000638190.1	1268	6	1887	766	1887	-766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGATCATCAATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	46659438	46656525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46656557_46657110_46657281_46658976_46659207_46659395
ENSMUSG00000003555.9_46657150_46660998_1	chr19	-	510	4	ISM	ENSMUSG00000003555.9	ENST00000638190.1	1268	6	327	1390	327	-1390	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTGCTCATCCCACACA	NA	NA	NA	NA	NA	NA	NA	NA	46660998	46657149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46657281_46658976_46659207_46659395_46659532_46660985
ENSMUSG00000003555.9_46657205_46661049_1	chr19	-	506	4	ISM	ENSMUSG00000003555.9	ENST00000638190.1	1268	6	276	1445	276	-1445	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTCATGCTGGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	46661049	46657204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46657281_46658976_46659207_46659395_46659532_46660985
ENSMUSG00000003555.9_46657265_46661092_1	chr19	-	489	4	ISM	ENSMUSG00000003555.9	ENST00000638190.1	1268	6	233	1505	233	-1505	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAGATTGACCAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	46661092	46657264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46657281_46658976_46659207_46659395_46659532_46660985
ENSMUSG00000003559.9_46703626_46729538_1	chr19	+	1133	5	ISM	ENSMUSG00000003559.9	ENSMUST00000237219.2	1719	9	7219	0	7219	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTCTGTAGTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	46703625	46729538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
ENSMUSG00000003573.16_70735684_70743669_1	chr8	+	751	7	ISM	ENSMUSG00000003573.16	ENST00000392351.8	1298	10	15	2145	15	-2145	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGTGGGAGGCAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	70735683	70743669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70735821_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656
ENSMUSG00000003573.16_70735684_70743725_1	chr8	+	807	7	ISM	ENSMUSG00000003573.16	ENST00000392351.8	1298	10	15	2089	15	-2089	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTCGGGAGGCCAACG	NA	NA	NA	NA	NA	NA	NA	NA	70735683	70743725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70735821_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656
ENSMUSG00000003573.16_70737896_70744012_1	chr8	+	791	7	ISM	ENSMUSG00000003573.16	ENSMUST00000003669.8	2323	9	0	2991	0	-1802	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAGAAAGAAGCAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	70737895	70744012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967
ENSMUSG00000003573.16_70738042_70745729_1	chr8	+	873	7	FSM	ENSMUSG00000003573.16	ENST00000594439.5	958	7	0	85	0	-85	multi-exon	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCTGCGCAGCTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	70738041	70745729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_70738201_70738580_70738713_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ENSMUSG00000003573.16_70738142_70744253_1	chr8	+	776	7	ISM	ENSMUSG00000003573.16	ENSMUST00000003669.8	2323	9	246	2750	100	-1561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCTGCAGGACCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	70738141	70744253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166
ENSMUSG00000003573.16_70738142_70745815_1	chr8	+	859	7	FSM	ENSMUSG00000003573.16	ENST00000594439.5	958	7	100	-1	100	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCATGGAGTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	70738141	70745815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_70738201_70738580_70738713_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ENSMUSG00000003573.16_70738581_70745729_1	chr8	+	822	7	ISM	ENSMUSG00000003573.16	ENSMUST00000003669.8	2323	9	685	1274	539	-85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCTGCGCAGCTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	70738580	70745729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ENSMUSG00000003575.14_70838607_70855177_2	chr8	-	1127	7	ISM	ENSMUSG00000003575.14	ENST00000601916.1	1438	10	6481	-1	6481	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCCTGGCGTGTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	70855177	70838606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70838986_70840190_70840372_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080
ENSMUSG00000003575.14_70838607_70855177_3	chr8	-	1126	7	NNC	ENSMUSG00000003575.14	novel	1438	10	NA	NA	6481	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCCTGGCGTGTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	70855177	70838606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_70838986_70840190_70840372_70845571_70845706_70850395_70850605_70850946_70850987_70853268_70853355_70855080
ENSMUSG00000003575.14_70838607_70855177_4	chr8	-	1125	7	NNC	ENSMUSG00000003575.14	novel	1438	10	NA	NA	6481	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCCTGGCGTGTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	70855177	70838606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_70838986_70840190_70840372_70845571_70845706_70850397_70850605_70850945_70850987_70853268_70853355_70855080
ENSMUSG00000003575.14_70838756_70857970_1	chr8	-	1037	8	NNC	ENSMUSG00000003575.14	novel	1438	10	NA	NA	3688	-148	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCGCTGGTCAGTCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	70857970	70838755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_70838986_70840190_70840372_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855081_70855176_70857908
ENSMUSG00000003575.14_70838756_70857970_2	chr8	-	1032	8	NNC	ENSMUSG00000003575.14	novel	1438	10	NA	NA	3688	-148	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCGCTGGTCAGTCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	70857970	70838755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_70838980_70840190_70840372_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908
ENSMUSG00000003575.14_70838759_70858778_1	chr8	-	1078	9	NNC	ENSMUSG00000003575.14	novel	1438	10	NA	NA	2880	-151	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCCGCTGGTCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	70858778	70838758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_70838986_70840190_70840372_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857963_70858727
ENSMUSG00000003575.14_70838822_70858800_1	chr8	-	1039	9	NNC	ENSMUSG00000003575.14	novel	1438	10	NA	NA	2858	-214	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCGACCCAGCCACCGA	NA	NA	NA	NA	NA	NA	NA	NA	70858800	70838821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_70838986_70840190_70840366_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727
ENSMUSG00000003575.14_70838925_70861589_1	chr8	-	1052	10	FSM	ENSMUSG00000003575.14	ENST00000601916.1	1438	10	69	317	69	-317	multi-exon	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCAGCTTTGATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	70861589	70838924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_70838986_70840190_70840372_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70861544
ENSMUSG00000003575.14_70838932_70861601_1	chr8	-	1049	10	NNC	ENSMUSG00000003575.14	novel	1438	10	NA	NA	57	-324	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGTGATGTCAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	70861601	70838931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_70838986_70840190_70840372_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857963_70858727_70858866_70861544
ENSMUSG00000003575.14_70838947_70861607_1	chr8	-	1042	10	NNC	ENSMUSG00000003575.14	novel	1438	10	NA	NA	51	-339	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCACACTGGCAGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	70861607	70838946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_70838986_70840190_70840366_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70861544
ENSMUSG00000003581.15_4085502_4086624_1	chr11	+	271	3	ISM	ENSMUSG00000003581.15	ENSMUST00000003677.11	1874	9	300	4548	300	-4548	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGAGGTAACCTGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	4085501	4086624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4085564_4085813_4085958_4086559
ENSMUSG00000003581.15_4085900_4087271_1	chr11	+	276	4	ISM	ENSMUSG00000003581.15	ENSMUST00000003677.11	1874	9	698	3901	698	-3901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGACATTGTGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	4085899	4087271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4085958_4086559_4086632_4086711_4086798_4087211
ENSMUSG00000003581.15_4087260_4089997_1	chr11	+	292	3	ISM	ENSMUSG00000003581.15	ENSMUST00000003677.11	1874	9	2058	1175	2058	-1175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCAGGGCAGCACACAG	NA	NA	NA	NA	NA	NA	NA	NA	4087259	4089997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4087369_4089738_4089859_4089934
ENSMUSG00000003581.15_4087337_4090049_1	chr11	+	267	3	ISM	ENSMUSG00000003581.15	ENSMUST00000003677.11	1874	9	2135	1123	2135	-1123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTAGATTACTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	4087336	4090049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4087369_4089738_4089859_4089934
ENSMUSG00000003604.15_112323309_112460165_1	chr2	+	684	5	ISM	ENSMUSG00000003604.15	ENST00000306730.8	1334	6	33	1319	33	-1091	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATCTCTGAGCTCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	112323308	112460165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112323567_112344794_112344973_112455499_112455571_112458093_112458190_112460084
ENSMUSG00000003604.15_112323439_112460287_1	chr2	+	676	5	ISM	ENSMUSG00000003604.15	ENST00000306730.8	1334	6	163	1197	163	-969	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCTGGAAGAAGAACTAG	NA	NA	NA	NA	NA	NA	NA	NA	112323438	112460287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112323567_112344794_112344973_112455499_112455571_112458093_112458190_112460084
ENSMUSG00000003604.15_112344889_112461256_1	chr2	+	721	5	ISM	ENSMUSG00000003604.15	ENST00000306730.8	1334	6	21613	228	21613	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGCCTGAAGCAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	112344888	112461256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112344973_112455499_112455571_112458093_112458190_112460084_112460422_112461123
ENSMUSG00000003604.15_112460167_112461484_1	chr2	+	616	2	ISM	ENSMUSG00000003604.15	ENSMUST00000099588.4	791	5	70188	-228	70188	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAGCTACATTTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	112460166	112461484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112460422_112461123
ENSMUSG00000003623.5_9016033_9046531_1	chr5	-	2759	17	ISM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	793	0	793	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGTTGAAAACAATGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	9046531	9016032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451
ENSMUSG00000003623.5_9016268_9047324_1	chr5	-	2761	18	FSM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	0	235	0	-235	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTTGCAATTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	9047324	9016267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ENSMUSG00000003721.15_121232082_121235047_1	chr1	-	1874	3	ISM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	20706	0	20360	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTCCTTTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	121235047	121232081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_121233677_121234592_121234693_121234868
ENSMUSG00000003721.15_121232186_121240013_1	chr1	-	1842	4	ISM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	15740	104	15394	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTAAACACTATAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	121240013	121232185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929
ENSMUSG00000003721.15_121232379_121247509_1	chr1	-	1874	5	ISM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	8244	297	7898	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATCTTGTACACTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	121247509	121232378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325
ENSMUSG00000003721.15_121232379_121247617_1	chr1	-	1982	5	ISM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	8136	297	7790	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATCTTGTACACTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	121247617	121232378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325
ENSMUSG00000003721.15_121232812_121255636_1	chr1	-	1850	6	FSM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	117	730	117	439	multi-exon	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACAGGTCATACAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	121255636	121232811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247702_121255419
ENSMUSG00000003731.14_129537773_129541799_1	chr4	-	515	2	NNC	ENSMUSG00000003731.14	novel	664	2	NA	NA	147	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTCTTTGGTTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	129541799	129537772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_129537966_129541477
ENSMUSG00000003731.14_129537773_129541799_2	chr4	-	517	2	FSM	ENSMUSG00000003731.14	ENST00000515055.1	664	2	147	0	147	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTCTTTGGTTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	129541799	129537772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129537966_129541475
ENSMUSG00000003762.14_26933195_26956711_1	chr7	+	1123	12	FSM	ENSMUSG00000003762.14	ENST00000677517.1	1424	12	65	236	65	-236	multi-exon	FALSE	canonical	NA	NA	NA	NA	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACGACTTTGGGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	26933194	26956711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_26933247_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ENSMUSG00000003778.15_34740874_34747546_1	chr18	-	919	7	ISM	ENSMUSG00000003778.15	ENSMUST00000097626.10	3005	21	10108	7962	10108	-6646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTTTGAAACAGTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	34747546	34740873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500
ENSMUSG00000003779.17_34757889_34760988_1	chr18	+	909	6	ISM	ENSMUSG00000003779.17	ENSMUST00000237407.2	3674	19	101	5342	101	-4763	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGCTGTCCTTGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	34757888	34760988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837
ENSMUSG00000003779.17_34758086_34761475_1	chr18	+	917	8	ISM	ENSMUSG00000003779.17	ENSMUST00000237407.2	3674	19	298	4855	0	-4276	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGTTCCAGCAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	34758085	34761475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437
ENSMUSG00000003779.17_34758504_34762279_1	chr18	+	1261	9	ISM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	-6	3472	-6	-3472	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGCACACCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	34758503	34762279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34758729_34759947_34760068_34760605_34760749_34760844_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193
ENSMUSG00000003779.17_34758504_34762515_1	chr18	+	1357	10	ISM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	-6	3236	-6	-3236	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCGTGTGTTCCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	34758503	34762515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34758729_34759947_34760068_34760605_34760749_34760844_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477
ENSMUSG00000003779.17_34758604_34761587_1	chr18	+	908	7	ISM	ENSMUSG00000003779.17	ENSMUST00000166044.3	3107	19	518	4271	94	-4164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCGGCTGTGTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	34758603	34761587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437
ENSMUSG00000003779.17_34758622_34765495_1	chr18	+	2402	18	ISM	ENSMUSG00000003779.17	ENSMUST00000166044.3	3107	19	536	363	112	-256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAGGAAAACCAGCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	34758621	34765495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUSG00000003779.17_34758667_34762526_1	chr18	+	1205	10	ISM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	157	3225	157	-3225	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAAGGCTTCTTCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	34758666	34762526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34758729_34759947_34760068_34760605_34760749_34760844_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477
ENSMUSG00000003779.17_34759766_34761839_1	chr18	+	977	7	ISM	ENSMUSG00000003779.17	ENSMUST00000166044.3	3107	19	1680	4019	1256	-3912	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTGTGGGAATTGACT	NA	NA	NA	NA	NA	NA	NA	NA	34759765	34761839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727
ENSMUSG00000003779.17_34759795_34765600_1	chr18	+	2408	17	ISM	ENSMUSG00000003779.17	ENSMUST00000166044.3	3107	19	1709	258	1285	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGCGCGGATCTTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	34759794	34765600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUSG00000003779.17_34760035_34763088_1	chr18	+	1207	10	ISM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	1525	2663	1525	-2663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCTGCATTCATTCATC	NA	NA	NA	NA	NA	NA	NA	NA	34760034	34763088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34760068_34760605_34760749_34760844_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054
ENSMUSG00000003779.17_34760686_34763220_1	chr18	+	1226	9	ISM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	2176	2531	2176	-2531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGACACAAGGCAGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	34760685	34763220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34760749_34760844_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054
ENSMUSG00000003779.17_34760845_34763479_1	chr18	+	1302	9	ISM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	2335	2272	2335	-2272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGCTAGCCCAGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	34760844	34763479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339
ENSMUSG00000003779.17_34760974_34763682_1	chr18	+	1281	10	ISM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	2464	2069	2464	-2069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCCTGGCCAGTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	34760973	34763682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574
ENSMUSG00000003779.17_34761156_34764253_1	chr18	+	1229	10	ISM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	2646	1498	2646	-1498	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAGCGGCACAACAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	34761155	34764253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198
ENSMUSG00000003779.17_34761563_34764619_1	chr18	+	1211	10	ISM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	3053	1132	3053	-1132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTCACCATTGATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	34761562	34764619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573
ENSMUSG00000003779.17_34761780_34765044_1	chr18	+	1201	10	ISM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	3270	707	3270	-707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCCACAGCACCGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	34761779	34765044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978
ENSMUSG00000003779.17_34762260_34765490_1	chr18	+	1215	9	ISM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	3750	261	3750	-261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAACCAGGAAAACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	34762259	34765490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUSG00000003779.17_34762296_34765560_1	chr18	+	1249	9	ISM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	3786	191	3786	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCGAACACCTACCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	34762295	34765560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUSG00000003779.17_34764197_34765889_1	chr18	+	964	4	ISM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	5687	-138	5687	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGGACAGAAAATTGATAT	NA	NA	NA	NA	NA	NA	NA	NA	34764196	34765889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUSG00000003779.17_34764573_34766084_1	chr18	+	962	3	ISM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	6063	-333	6063	196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGCACCACCACATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	34764572	34766084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34764666_34764978_34765117_34765353
ENSMUSG00000003779.17_34764650_34766109_1	chr18	+	910	3	ISM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	6140	-358	6140	221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTTCCTTCCATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	34764649	34766109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34764666_34764978_34765117_34765353
ENSMUSG00000003779.17_34765070_34766211_1	chr18	+	905	2	ISM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	6560	-460	6560	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGTAGCAGACATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	34765069	34766211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34765117_34765353
ENSMUSG00000003808.19_85583649_85595741_1	chr8	+	1550	12	NNC	ENSMUSG00000003808.19	novel	1560	12	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGGCAGGGTTCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	85583648	85595741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590859_85590989_85591065_85591182_85594005_85594091_85594184_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ENSMUSG00000003808.19_85583649_85595741_2	chr8	+	1551	12	NNC	ENSMUSG00000003808.19	novel	1560	12	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGGCAGGGTTCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	85583648	85595741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590859_85590989_85591065_85591182_85594011_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ENSMUSG00000003808.19_85583649_85595741_3	chr8	+	1552	12	NNC	ENSMUSG00000003808.19	novel	1560	12	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGGCAGGGTTCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	85583648	85595741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_85583806_85587534_85587673_85587755_85587855_85587940_85588060_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ENSMUSG00000003808.19_85583649_85595741_4	chr8	+	1555	12	NNC	ENSMUSG00000003808.19	novel	1560	12	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGGCAGGGTTCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	85583648	85595741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590861_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ENSMUSG00000003808.19_85583649_85595741_5	chr8	+	1549	12	NNC	ENSMUSG00000003808.19	novel	1560	12	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGGCAGGGTTCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	85583648	85595741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594860_85594968_85595494
ENSMUSG00000003808.19_85583649_85595741_6	chr8	+	1557	12	FSM	ENSMUSG00000003808.19	ENST00000423140.6	1560	12	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGGCAGGGTTCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	85583648	85595741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ENSMUSG00000003808.19_85587630_85590882_1	chr8	+	377	5	ISM	ENSMUSG00000003808.19	ENSMUST00000109754.2	1795	13	3984	5004	3984	-4859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACCCTACAACTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	85587629	85590882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859
ENSMUSG00000003813.16_85561540_85564678_1	chr8	-	1185	5	ISM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	2616	0	2592	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGCTTCTCACAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	85564678	85561539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635
ENSMUSG00000003813.16_85561828_85565295_1	chr8	-	1236	7	ISM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	1999	288	1975	-288	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATCCCCAAGGACAACC	NA	NA	NA	NA	NA	NA	NA	NA	85565295	85561827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097
ENSMUSG00000003813.16_85562016_85565584_1	chr8	-	1194	8	ISM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	1710	476	1686	-476	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGGCCCCCATTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	85565584	85562015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422
ENSMUSG00000003813.16_85562249_85567270_1	chr8	-	1109	9	FSM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	24	709	0	-709	multi-exon	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGAGAATTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	85567270	85562248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ENSMUSG00000003814.9_85568805_85572549_1	chr8	-	1192	7	NNC	ENSMUSG00000003814.9	novel	1600	10	NA	NA	944	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGCAGCCAGTTCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	85572549	85568804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_85569282_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490
ENSMUSG00000003814.9_85568805_85572601_1	chr8	-	1248	8	ISM	ENSMUSG00000003814.9	ENST00000586760.2	1600	10	892	0	892	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGCAGCCAGTTCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	85572601	85568804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85569242_85569429_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490
ENSMUSG00000003814.9_85568901_85572895_1	chr8	-	1262	9	ISM	ENSMUSG00000003814.9	ENST00000586760.2	1600	10	598	96	598	-96	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGAAGGGGGTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	85572895	85568900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85569242_85569429_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878
ENSMUSG00000003814.9_85569005_85570837_1	chr8	-	706	3	ISM	ENSMUSG00000003814.9	ENSMUST00000003912.7	2184	9	2726	526	2656	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCTTTTGGTCACTACC	NA	NA	NA	NA	NA	NA	NA	NA	85570837	85569004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85569474_85569572_85569666_85570693
ENSMUSG00000003814.9_85569005_85573459_1	chr8	-	1366	10	FSM	ENSMUSG00000003814.9	ENST00000586760.2	1600	10	34	200	34	-200	multi-exon	FALSE	canonical	NA	NA	NA	NA	3800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCTTTTGGTCACTACC	NA	NA	NA	NA	NA	NA	NA	NA	85573459	85569004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85569242_85569429_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ENSMUSG00000003814.9_85569225_85571120_1	chr8	-	600	4	ISM	ENSMUSG00000003814.9	ENSMUST00000003912.7	2184	9	2443	746	2373	-420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCTGGCTGCTCCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	85571120	85569224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006
ENSMUSG00000003814.9_85569225_85571249_1	chr8	-	647	5	ISM	ENSMUSG00000003814.9	ENSMUST00000003912.7	2184	9	2314	746	2244	-420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCTGGCTGCTCCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	85571249	85569224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202
ENSMUSG00000003814.9_85571062_85572980_1	chr8	-	670	5	ISM	ENSMUSG00000003814.9	ENST00000586760.2	1600	10	513	2257	513	-2257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAGATGGATGGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	85572980	85571061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878
ENSMUSG00000003814.9_85571202_85573459_1	chr8	-	735	5	ISM	ENSMUSG00000003814.9	ENST00000586760.2	1600	10	34	2397	34	-2397	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTTGGGAGGGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	85573459	85571201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ENSMUSG00000003814.9_85571499_85573563_1	chr8	-	629	4	ISM	ENSMUSG00000003814.9	ENST00000586760.2	1600	10	-70	2694	0	-2694	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGGGGTAGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	85573563	85571498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85571595_85572490_85572695_85572878_85572981_85573336
ENSMUSG00000003848.15_108139592_108142769_1	chr8	-	256	2	ISM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	8912	471	8912	-471	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAATCCCAATGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	108142769	108139591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_108139816_108142737
ENSMUSG00000003848.15_108139747_108143677_1	chr8	-	266	3	ISM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	8004	626	8004	-626	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGCTGCGACTCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	108143677	108139746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_108139816_108142737_108142883_108143625
ENSMUSG00000003848.15_108142870_108144858_1	chr8	-	282	3	ISM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	6823	3749	6823	-3749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACCGAGTGTTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	108144858	108142869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_108142883_108143625_108143724_108144687
ENSMUSG00000003848.15_108143690_108144993_1	chr8	-	253	3	ISM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	6688	4569	6688	-4569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGAACGGCATGCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	108144993	108143689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_108143724_108144687_108144859_108144945
ENSMUSG00000003849.9_108114857_108117785_1	chr8	-	1009	2	ISM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	12053	0	1857	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTGGCGCATGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	108117785	108114856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_108115757_108117676
ENSMUSG00000003849.9_108115021_108119403_1	chr8	-	1083	4	ISM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	10435	164	239	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGACTGACATGGC	NA	NA	NA	NA	NA	NA	NA	NA	108119403	108115020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272
ENSMUSG00000003849.9_108115021_108119645_1	chr8	-	1147	4	FSM	ENSMUSG00000003849.9	ENST00000379047.7	1144	4	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGACTGACATGGC	NA	NA	NA	NA	NA	NA	NA	NA	108119645	108115020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_108115757_108118753_108118868_108119272_108119404_108119479
ENSMUSG00000003849.9_108115190_108119549_1	chr8	-	984	5	ISM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	10289	333	93	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTAGATGGCATCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	108119549	108115189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479
ENSMUSG00000003849.9_108115317_108129729_1	chr8	-	984	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	109	460	109	136	multi-exon	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGTTCTGCCATAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	108129729	108115316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
ENSMUSG00000003849.9_108115360_108129838_1	chr8	-	1050	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	0	503	0	93	multi-exon	FALSE	canonical	NA	NA	NA	NA	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAAAGGAGTAAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	108129838	108115359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
ENSMUSG00000003849.9_108115421_108129838_1	chr8	-	989	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	0	564	0	32	multi-exon	FALSE	canonical	NA	NA	NA	NA	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTCTTTTTCCCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	108129838	108115420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
ENSMUSG00000003849.9_108115569_108119318_1	chr8	-	234	2	ISM	ENSMUSG00000003849.9	ENST00000439109.6	598	3	324	116	324	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCTTAATGAAAAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	108119318	108115568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_108115757_108119272
ENSMUSG00000003849.9_108115652_108119493_1	chr8	-	250	3	FSM	ENSMUSG00000003849.9	ENST00000439109.6	598	3	149	199	149	-199	multi-exon	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACGTCTGGAAACCGT	NA	NA	NA	NA	NA	NA	NA	NA	108119493	108115651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_108115757_108119272_108119404_108119479
ENSMUSG00000003849.9_108115715_108119535_1	chr8	-	229	3	FSM	ENSMUSG00000003849.9	ENST00000439109.6	598	3	107	262	107	-262	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGGTTTACAGCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	108119535	108115714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_108115757_108119272_108119404_108119479
ENSMUSG00000003849.9_108115736_108119618_1	chr8	-	291	3	FSM	ENSMUSG00000003849.9	ENST00000439109.6	598	3	24	283	24	-283	multi-exon	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTCCAGGTCTTAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	108119618	108115735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_108115757_108119272_108119404_108119479
ENSMUSG00000003865.17_45084301_45104945_1	chr7	+	2547	16	FSM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	33	1098	0	-326	multi-exon	TRUE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGCTCCAATCTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	45084300	45104945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ENSMUSG00000003865.17_45085989_45105166_1	chr7	+	2441	15	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	1721	877	1688	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCTCAGGCCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	45085988	45105166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ENSMUSG00000003865.17_45086048_45105271_1	chr7	+	2487	15	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	1780	772	1747	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGCCTGCAAGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	45086047	45105271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ENSMUSG00000003865.17_45087637_45105430_1	chr7	+	2445	14	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	3369	613	3336	159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCCATCATCCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	45087636	45105430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ENSMUSG00000003865.17_45088929_45105537_1	chr7	+	2445	13	ISM	ENSMUSG00000003865.17	ENSMUST00000211150.2	2681	15	4628	-266	4628	266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAACCCACGACTGCGATG	NA	NA	NA	NA	NA	NA	NA	NA	45088928	45105537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ENSMUSG00000003865.17_45089018_45105594_1	chr7	+	2413	13	ISM	ENSMUSG00000003865.17	ENSMUST00000211150.2	2681	15	4717	-323	4717	323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCAAAGGAGCATGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	45089017	45105594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ENSMUSG00000003865.17_45089060_45105661_1	chr7	+	2438	13	ISM	ENSMUSG00000003865.17	ENSMUST00000211150.2	2681	15	4759	-390	4759	-382	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTCCAGTGTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	45089059	45105661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ENSMUSG00000003865.17_45089426_45105772_1	chr7	+	2423	12	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	5158	271	5125	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCAGGAGTCTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	45089425	45105772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ENSMUSG00000003865.17_45092340_45106043_1	chr7	+	2528	10	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	8072	0	8039	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTGGACATAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	45092339	45106043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ENSMUSG00000003865.17_45092399_45106043_1	chr7	+	2469	10	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	8131	0	8098	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTGGACATAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	45092398	45106043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ENSMUSG00000003868.15_45071184_45072231_1	chr7	-	611	4	ISM	ENSMUSG00000003868.15	ENSMUST00000107771.12	1834	15	11816	-138	11816	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGTGGGGGAGGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	45072231	45071183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111
ENSMUSG00000003868.15_45071322_45080798_1	chr7	-	1462	14	ISM	ENSMUSG00000003868.15	ENSMUST00000107771.12	1834	15	3249	0	3249	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	948	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTGCTGTGTCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	45080798	45071321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743
ENSMUSG00000003868.15_45071516_45083780_1	chr7	-	1459	14	ISM	ENSMUSG00000003868.15	ENSMUST00000107771.12	1834	15	267	194	267	-194	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	998	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTCACCCTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	45083780	45071515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ENSMUSG00000003868.15_45071891_45083897_1	chr7	-	1379	13	ISM	ENSMUSG00000003868.15	ENSMUST00000107771.12	1834	15	150	569	150	-569	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	778	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCGCATTGGGCTCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	45083897	45071890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ENSMUSG00000003868.15_45072112_45084047_1	chr7	-	1481	12	ISM	ENSMUSG00000003868.15	ENSMUST00000107771.12	1834	15	0	790	0	-790	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGGCCTTCACCCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	45084047	45072111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ENSMUSG00000003868.15_45077928_45084372_1	chr7	-	598	7	ISM	ENSMUSG00000003868.15	ENSMUST00000211214.2	2312	18	3148	6744	-325	-6606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGACCGGCCAGCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	45084372	45077927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675_45083781_45084304
ENSMUSG00000003868.15_45078132_45084404_1	chr7	-	533	6	ISM	ENSMUSG00000003868.15	ENSMUST00000211214.2	2312	18	3116	6948	-357	-6810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGACTGAGGCTCTAACG	NA	NA	NA	NA	NA	NA	NA	NA	45084404	45078131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675_45083781_45084304
ENSMUSG00000003868.15_45078955_45084565_1	chr7	-	542	5	ISM	ENSMUSG00000003868.15	ENSMUST00000211214.2	2312	18	2955	7771	-518	-7633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAGAAGGGAAGATTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	45084565	45078954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45079020_45079332_45079389_45080743_45080799_45083675_45083781_45084304
ENSMUSG00000003872.10_45017315_45020010_1	chr7	-	528	5	FSM	ENSMUSG00000003872.10	ENST00000391864.7	544	5	16	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTGTCTTGTGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	45020010	45017314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_45017423_45017727_45017892_45019338_45019411_45019550_45019670_45019945
ENSMUSG00000003873.12_45111121_45112929_1	chr7	-	377	2	ISM	ENSMUSG00000003873.12	ENSMUST00000033093.10	867	6	3393	0	3270	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1026	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCCCTTGTCCGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	45112929	45111120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45111391_45112822
ENSMUSG00000003873.12_45111121_45114748_1	chr7	-	507	3	ISM	ENSMUSG00000003873.12	ENSMUST00000211365.2	801	6	1512	0	1451	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1785	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCCCTTGTCCGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	45114748	45111120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45111387_45112822_45112928_45114612
ENSMUSG00000003873.12_45111291_45115476_1	chr7	-	413	4	ISM	ENSMUSG00000003873.12	ENSMUST00000211365.2	801	6	784	170	723	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCCCACTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	45115476	45111290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45111387_45112822_45112928_45114612_45114749_45115400
ENSMUSG00000003873.12_45111291_45115695_1	chr7	-	536	5	ISM	ENSMUSG00000003873.12	ENSMUST00000211365.2	801	6	565	170	504	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCCCACTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	45115695	45111290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45111387_45112822_45112928_45114612_45114749_45115400_45115548_45115643
ENSMUSG00000003873.12_45111291_45116199_1	chr7	-	423	5	NIC	ENSMUSG00000003873.12	novel	433	5	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCCCACTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	45116199	45111290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_45111387_45112822_45112928_45114612_45114749_45115643_45115696_45116165
ENSMUSG00000003873.12_45112804_45116199_2	chr7	-	493	5	ISM	ENSMUSG00000003873.12	ENSMUST00000211365.2	801	6	61	1683	0	1	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1552	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATACTTGAGACCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	45116199	45112803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
ENSMUSG00000003873.12_45114613_45116199_1	chr7	-	369	4	ISM	ENSMUSG00000003873.12	ENSMUST00000211365.2	801	6	61	3492	0	-1808	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCAGCCGGACGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	45116199	45114612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45114749_45115400_45115548_45115643_45115696_45116165
ENSMUSG00000003873.12_45114613_45116199_2	chr7	-	170	2	ISM	ENSMUSG00000003873.12	ENST00000539787.2	293	3	0	1808	0	-1808	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCAGCCGGACGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	45116199	45114612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45114749_45116165
ENSMUSG00000003873.12_45115408_45116322_1	chr7	-	349	3	ISM	ENSMUSG00000003873.12	ENSMUST00000033093.10	867	6	0	4287	0	-2603	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGAGGTGTGCTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	45116322	45115407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45115548_45115643_45115696_45116165
ENSMUSG00000003948.18_90140302_90168173_1	chr11	+	1435	7	FSM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	0	1242	0	-1242	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAACATGGTTATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	90140301	90168173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_90140562_90148345_90148428_90150652_90150814_90155328_90155404_90156870_90156973_90158337_90158408_90167488
ENSMUSG00000003948.18_90140446_90168259_1	chr11	+	1377	7	FSM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	144	1156	144	-1156	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCTCATCCATGCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	90140445	90168259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_90140562_90148345_90148428_90150652_90150814_90155328_90155404_90156870_90156973_90158337_90158408_90167488
ENSMUSG00000003948.18_90140488_90168320_1	chr11	+	1396	7	FSM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	186	1095	186	-1095	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTCTGGCAGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	90140487	90168320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_90140562_90148345_90148428_90150652_90150814_90155328_90155404_90156870_90156973_90158337_90158408_90167488
ENSMUSG00000003948.18_90150758_90168556_1	chr11	+	1371	5	ISM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	10456	859	10456	-859	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACAGTCGGGGAGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	90150757	90168556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_90150814_90155328_90155404_90156870_90156973_90158337_90158408_90167488
ENSMUSG00000003948.18_90155327_90168684_1	chr11	+	1445	4	ISM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	15025	731	15025	-731	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCACTTAACTTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	90155326	90168684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_90155404_90156870_90156973_90158337_90158408_90167488
ENSMUSG00000003948.18_90158343_90168799_1	chr11	+	1376	2	ISM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	18041	616	18041	-616	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGCCATAAATAAAACATTG	NA	NA	NA	NA	NA	NA	NA	NA	90158342	90168799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_90158408_90167488
ENSMUSG00000003949.17_90229645_90236808_1	chr11	-	2381	2	ISM	ENSMUSG00000003949.17	ENST00000573945.5	3066	4	43709	257	43709	-257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGGATTCTGAGTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	90236808	90229644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_90231801_90236583
ENSMUSG00000003949.17_90229816_90278818_1	chr11	-	2413	3	ISM	ENSMUSG00000003949.17	ENST00000573945.5	3066	4	1699	428	1699	-428	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATACTGAGGCTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	90278818	90229815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_90231801_90236583_90236805_90278611
ENSMUSG00000003949.17_90229968_90278818_1	chr11	-	2261	3	ISM	ENSMUSG00000003949.17	ENST00000573945.5	3066	4	1699	580	1699	-580	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAACTATTCCGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	90278818	90229967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_90231801_90236583_90236805_90278611
ENSMUSG00000003949.17_90230115_90280516_1	chr11	-	2338	4	FSM	ENSMUSG00000003949.17	ENST00000573945.5	3066	4	1	727	1	-727	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGACCAAAAGGAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	90280516	90230114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_90231801_90236583_90236805_90278611_90278948_90280421
ENSMUSG00000003970.10_76788278_76790514_1	chr15	+	845	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	76788277	76790514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76788310_76788502_76788645_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ENSMUSG00000003970.10_76788278_76790514_2	chr15	+	846	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	76788277	76790514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76788310_76788502_76788651_76788738_76788881_76789022_76789237_76790055_76790172_76790320
ENSMUSG00000003970.10_76788278_76790514_3	chr15	+	844	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	76788277	76790514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789230_76790055_76790172_76790320
ENSMUSG00000003970.10_76788503_76790514_1	chr15	+	812	5	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	201	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	76788502	76790514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76788651_76788738_76788881_76789017_76789230_76790055_76790172_76790320
ENSMUSG00000003970.10_76788503_76790514_2	chr15	+	807	5	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	201	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	76788502	76790514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76788651_76788738_76788881_76789017_76789237_76790055_76790160_76790320
ENSMUSG00000003970.10_76788503_76790514_3	chr15	+	813	5	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	201	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	76788502	76790514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76788645_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ENSMUSG00000003974.7_9535703_9639914_1	chr5	-	1503	4	NNC	ENSMUSG00000003974.7	novel	1779	4	NA	NA	272	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATGGAAACAGAACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	9639914	9535702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_9535842_9554724_9554894_9619918_9620775_9639575
ENSMUSG00000003974.7_9535703_9639914_2	chr5	-	1509	4	FSM	ENSMUSG00000003974.7	ENST00000439827.1	1779	4	272	-2	272	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATGGAAACAGAACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	9639914	9535702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_9535842_9554724_9554900_9619918_9620775_9639575
ENSMUSG00000003974.7_9535767_9639907_1	chr5	-	1436	4	NNC	ENSMUSG00000003974.7	novel	1779	4	NA	NA	279	-62	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1979	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTCGCAGTTCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	9639907	9535766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_9535842_9554726_9554900_9619918_9620775_9639575
ENSMUSG00000003974.7_9619917_9640138_1	chr5	-	1421	2	ISM	ENSMUSG00000003974.7	ENST00000439827.1	1779	4	48	84212	48	-84212	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGTGGGCCTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	9640138	9619916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_9620775_9639575
ENSMUSG00000003992.16_91609282_91823245_1	chr13	+	597	8	ISM	ENSMUSG00000003992.16	ENST00000401636.1	891	14	-24	17933	-18	-17933	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCAAAAGCTTATTACTC	NA	NA	NA	NA	NA	NA	NA	NA	91609281	91823245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91812236_91812297_91817794_91817862_91818512_91818584_91823152
ENSMUSG00000003992.16_91609282_91828757_1	chr13	+	621	9	ISM	ENSMUSG00000003992.16	ENST00000509053.5	1475	15	-18	20629	-18	-12421	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATACATATTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	91609281	91828757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708
ENSMUSG00000003992.16_91609282_91849200_2	chr13	+	1496	17	FSM	ENSMUSG00000003992.16	ENSMUST00000004094.15	3957	17	113	2348	-18	-87	multi-exon	TRUE	canonical	NA	NA	NA	NA	1256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTTTAATTATTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	91609281	91849200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91790420_91790511_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
ENSMUSG00000003992.16_91609282_91849200_3	chr13	+	1436	16	FSM	ENSMUSG00000003992.16	ENST00000505980.5	1504	16	-19	87	-18	-87	multi-exon	FALSE	canonical	NA	NA	NA	NA	1532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTTTAATTATTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	91609281	91849200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91790420_91790511_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
ENSMUSG00000003992.16_91672704_91828757_1	chr13	+	559	8	ISM	ENSMUSG00000003992.16	ENST00000401636.1	891	14	63398	12421	63398	-12421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATACATATTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	91672703	91828757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_91672777_91687453_91687516_91712728_91712814_91812236_91812297_91817794_91817862_91818512_91818584_91823152_91823245_91828708
ENSMUSG00000003992.16_91672704_91833384_1	chr13	+	626	10	ISM	ENSMUSG00000003992.16	ENST00000509053.5	1475	15	63404	16002	63398	-7794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTAATTCAAACTAGC	NA	NA	NA	NA	NA	NA	NA	NA	91672703	91833384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_91672777_91687453_91687516_91712728_91712814_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329
ENSMUSG00000003992.16_91672704_91849200_1	chr13	+	1345	15	NNC	ENSMUSG00000003992.16	novel	1504	16	NA	NA	63398	-87	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTTTAATTATTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	91672703	91849200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_91672777_91687458_91687516_91712728_91712814_91790420_91790511_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
ENSMUSG00000003992.16_91687462_91833384_1	chr13	+	569	9	ISM	ENSMUSG00000003992.16	ENST00000401636.1	891	14	78156	7794	78156	-7794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTAATTCAAACTAGC	NA	NA	NA	NA	NA	NA	NA	NA	91687461	91833384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_91687516_91712728_91712814_91812236_91812297_91817794_91817862_91818512_91818584_91823152_91823245_91828708_91828758_91831800_91831837_91833329
ENSMUSG00000003992.16_91687462_91836985_1	chr13	+	616	10	ISM	ENSMUSG00000003992.16	ENST00000509053.5	1475	15	78162	12401	78156	-4193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATATGTTTTAAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	91687461	91836985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_91687516_91712728_91712814_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914
ENSMUSG00000003992.16_91687462_91849355_1	chr13	+	1424	14	ISM	ENSMUSG00000003992.16	ENST00000505980.5	1504	16	78161	-68	78156	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTCATTCACTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	91687461	91849355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_91687516_91712728_91712814_91790420_91790511_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
ENSMUSG00000003992.16_91687462_91849355_2	chr13	+	1413	13	NNC	ENSMUSG00000003992.16	novel	1504	16	NA	NA	78156	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTCATTCACTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	91687461	91849355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_91687516_91712728_91712814_91790420_91790511_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839076_91842137_91842237_91848784
ENSMUSG00000003992.16_91712728_91836985_1	chr13	+	587	9	ISM	ENSMUSG00000003992.16	ENST00000401636.1	891	14	103422	4193	103422	-4193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATATGTTTTAAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	91712727	91836985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_91712814_91812236_91812297_91817794_91817862_91818512_91818584_91823152_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914
ENSMUSG00000003992.16_91712728_91839057_1	chr13	+	642	10	ISM	ENSMUSG00000003992.16	ENST00000509053.5	1475	15	103428	10329	103422	-2121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTCGGCTTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	91712727	91839057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_91712814_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978
ENSMUSG00000003992.16_91712728_91849355_1	chr13	+	1369	13	NNC	ENSMUSG00000003992.16	novel	1504	16	NA	NA	103422	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTCATTCACTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	91712727	91849355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_91712814_91790420_91790511_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848786
ENSMUSG00000003992.16_91812237_91839058_1	chr13	+	581	9	ISM	ENSMUSG00000003992.16	ENST00000401636.1	891	14	202931	2120	202931	-2120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTCGGCTTTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	91812236	91839058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_91812297_91817794_91817862_91818512_91818584_91823152_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978
ENSMUSG00000003992.16_91817793_91841178_1	chr13	+	551	9	ISM	ENSMUSG00000003992.16	ENST00000401636.1	891	14	208487	0	208487	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAATGCTGTAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	91817792	91841178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_91817862_91818512_91818584_91823152_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149
ENSMUSG00000003992.16_91817794_91848893_1	chr13	+	635	10	ISM	ENSMUSG00000003992.16	ENST00000509053.5	1475	15	208494	493	208488	-394	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGTTAGACAAAGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	91817793	91848893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91848784
ENSMUSG00000003992.16_91833330_91849200_1	chr13	+	650	5	ISM	ENSMUSG00000003992.16	ENST00000509053.5	1475	15	224030	186	224024	-87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTTTAATTATTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	91833329	91849200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91848784
ENSMUSG00000003992.16_91838979_91849355_1	chr13	+	679	3	ISM	ENSMUSG00000003992.16	ENST00000509053.5	1475	15	229679	31	229673	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTCATTCACTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	91838978	91849355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_91839058_91841149_91841179_91848784
ENSMUSG00000003992.16_91842147_91850223_1	chr13	+	1529	2	ISM	ENSMUSG00000003992.16	ENST00000505980.5	1504	16	232846	-936	232841	837	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCCTAATAGGAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	91842146	91850223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_91842237_91848784
ENSMUSG00000004032.11_107803162_107805865_1	chr3	+	783	8	FSM	ENSMUSG00000004032.11	ENSMUST00000004134.11	945	8	25	137	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGAGCTCGCTGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	107803161	107805865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_107803315_107803613_107803690_107803941_107804007_107804603_107804686_107804777_107804879_107805282_107805379_107805481_107805593_107805766
ENSMUSG00000004035.13_107833650_107837690_1	chr3	-	955	4	ISM	ENSMUSG00000004035.13	ENSMUST00000004137.11	1377	8	1443	0	1240	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTTCTTTGGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	107837690	107833649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107834297_107836185_107836297_107836378_107836475_107837589
ENSMUSG00000004040.17_100779195_100784628_1	chr11	-	899	5	ISM	ENSMUSG00000004040.17	ENSMUST00000138438.2	2506	24	45677	-312	45578	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCCCATGGCATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	100784628	100779194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490
ENSMUSG00000004040.17_100779322_100784773_1	chr11	-	831	6	ISM	ENSMUSG00000004040.17	ENSMUST00000138438.2	2506	24	45532	-185	45433	185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAGAGCACCTCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	100784773	100779321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716
ENSMUSG00000004040.17_100779507_100785594_1	chr11	-	805	8	ISM	ENSMUSG00000004040.17	ENSMUST00000138438.2	2506	24	44711	0	44612	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTGACTTGAGACACCTG	NA	NA	NA	NA	NA	NA	NA	NA	100785594	100779506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526
ENSMUSG00000004040.17_100780304_100785948_1	chr11	-	852	8	ISM	ENSMUSG00000004040.17	ENSMUST00000138438.2	2506	24	44357	797	44258	-797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTTTGGAGGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	100785948	100780303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889
ENSMUSG00000004040.17_100795844_100830206_1	chr11	-	834	8	ISM	ENSMUSG00000004040.17	ENSMUST00000092671.12	2927	24	0	16782	0	-16337	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACGTGCAGAAGACACTGA	NA	NA	NA	NA	NA	NA	NA	NA	100830206	100795843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ENSMUSG00000004043.15_100751310_100772988_1	chr11	+	2175	17	NNC	ENSMUSG00000004043.15	novel	2211	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTAGGTCATGGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100751309	100772988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_100751403_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770441_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887
ENSMUSG00000004043.15_100751310_100772988_2	chr11	+	2179	17	NNC	ENSMUSG00000004043.15	novel	2211	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTAGGTCATGGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100751309	100772988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_100751403_100752546_100752704_100753956_100754047_100756156_100756332_100764829_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887
ENSMUSG00000004043.15_100751310_100772988_3	chr11	+	2180	17	FSM	ENSMUSG00000004043.15	ENST00000590726.7	2211	17	31	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTAGGTCATGGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100751309	100772988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_100751403_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887
ENSMUSG00000004043.15_100751310_100772988_4	chr11	+	2174	17	NNC	ENSMUSG00000004043.15	novel	2211	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTAGGTCATGGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100751309	100772988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_100751403_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772569_100772616_100772887
ENSMUSG00000004043.15_100766356_100770456_1	chr11	+	451	5	ISM	ENSMUSG00000004043.15	ENST00000677893.1	2371	18	15105	2532	15046	-2532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGACAAGGTGCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	100766355	100770456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100766489_100767602_100767691_100767767_100767885_100770104_100770198_100770436
ENSMUSG00000004043.15_100766416_100770507_1	chr11	+	442	5	ISM	ENSMUSG00000004043.15	ENST00000677893.1	2371	18	15165	2481	15106	-2481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGCTGAAGTACAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	100766415	100770507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100766489_100767602_100767691_100767767_100767885_100770104_100770198_100770436
ENSMUSG00000004043.15_100766467_100770564_1	chr11	+	448	5	ISM	ENSMUSG00000004043.15	ENST00000677893.1	2371	18	15216	2424	15157	-2424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAACTGTTCAACATCA	NA	NA	NA	NA	NA	NA	NA	NA	100766466	100770564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100766489_100767602_100767691_100767767_100767885_100770104_100770198_100770436
ENSMUSG00000004043.15_100771293_100772992_1	chr11	+	445	4	ISM	ENSMUSG00000004043.15	ENST00000590726.7	2211	17	20014	-4	19983	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTCATGGTTTTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	100771292	100772992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100771425_100771855_100772012_100772563_100772616_100772887
ENSMUSG00000004044.10_100849267_100861025_1	chr11	-	1095	2	FSM	ENSMUSG00000004044.10	ENSMUST00000060792.6	3491	2	688	1708	688	-1708	multi-exon	FALSE	canonical	NA	NA	NA	NA	2259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAAGAGCAGCCCTCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	100861025	100849266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100850152_100860815
ENSMUSG00000004044.10_100849382_100861180_1	chr11	-	1135	2	FSM	ENSMUSG00000004044.10	ENSMUST00000060792.6	3491	2	533	1823	533	-1823	multi-exon	FALSE	canonical	NA	NA	NA	NA	2765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACACCGCCTTTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	100861180	100849381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100850152_100860815
ENSMUSG00000004044.10_100849520_100861377_1	chr11	-	1194	2	FSM	ENSMUSG00000004044.10	ENSMUST00000060792.6	3491	2	336	1961	336	-1961	multi-exon	FALSE	canonical	NA	NA	NA	NA	3390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCACACGCTGCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	100861377	100849519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100850152_100860815
ENSMUSG00000004054.10_5740150_5747642_1	chr19	+	1924	8	ISM	ENSMUSG00000004054.10	ENSMUST00000004156.10	3898	12	1085	5251	1085	-5251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGGGTCCCCTAGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	5740149	5747642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585
ENSMUSG00000004054.10_5740373_5750827_1	chr19	+	1946	9	ISM	ENSMUSG00000004054.10	ENSMUST00000004156.10	3898	12	1308	2066	1308	-2066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGATGCCCTCACCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	5740372	5750827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617
ENSMUSG00000004054.10_5740697_5752167_1	chr19	+	1926	10	ISM	ENSMUSG00000004054.10	ENSMUST00000004156.10	3898	12	1632	726	1632	-726	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTCAGCTGGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	5740696	5752167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ENSMUSG00000004054.10_5740873_5752331_1	chr19	+	1914	10	ISM	ENSMUSG00000004054.10	ENSMUST00000004156.10	3898	12	1808	562	1808	-562	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCCCAGGCCCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	5740872	5752331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ENSMUSG00000004054.10_5745590_5752737_1	chr19	+	1930	8	ISM	ENSMUSG00000004054.10	ENSMUST00000004156.10	3898	12	6525	156	6525	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCCCTGTCTCCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	5745589	5752737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ENSMUSG00000004056.16_27291171_27328852_1	chr7	+	792	6	ISM	ENSMUSG00000004056.16	ENSMUST00000167435.8	2865	15	0	10023	0	-8743	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCACTCGGGGTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	27291170	27328852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720
ENSMUSG00000004056.16_27335478_27337710_1	chr7	+	745	5	ISM	ENSMUSG00000004056.16	ENSMUST00000051356.12	2923	14	30195	1168	27391	115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGACTTAGTGGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	27335477	27337710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ENSMUSG00000004056.16_27335831_27337968_1	chr7	+	746	4	ISM	ENSMUSG00000004056.16	ENSMUST00000085917.5	1392	12	27744	-373	27744	373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCACCCCACCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	27335830	27337968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27335904_27336347_27336436_27336516_27336620_27337486
ENSMUSG00000004069.18_4501978_4524919_1	chr16	+	1498	9	FSM	ENSMUSG00000004069.18	ENST00000431375.6	2139	9	7	634	-1	377	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTCCTGGACAGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	4501977	4524919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_4502209_4511206_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ENSMUSG00000004069.18_4501978_4525000_1	chr16	+	1579	9	FSM	ENSMUSG00000004069.18	ENST00000431375.6	2139	9	7	553	-1	458	multi-exon	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGAAAGTGGGACCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	4501977	4525000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_4502209_4511206_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ENSMUSG00000004069.18_4501978_4525380_2	chr16	+	2308	11	FSM	ENSMUSG00000004069.18	ENSMUST00000115854.4	2505	11	18	179	-1	-173	multi-exon	FALSE	canonical	NA	NA	NA	NA	2317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTAAAGGTCCTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	4501977	4525380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ENSMUSG00000004069.18_4502116_4525559_1	chr16	+	2349	11	FSM	ENSMUSG00000004069.18	ENSMUST00000115854.4	2505	11	156	0	137	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	4502115	4525559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ENSMUSG00000004069.18_4502149_4525027_1	chr16	+	1435	9	FSM	ENSMUSG00000004069.18	ENST00000431375.6	2139	9	178	526	170	485	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGACACCTAGCAACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	4502148	4525027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_4502209_4511206_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ENSMUSG00000004070.16_4581593_4582712_1	chr16	+	361	2	ISM	ENSMUSG00000004070.16	ENSMUST00000118885.8	1392	6	6826	1397	6826	-1397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCCCATGCTTATACTCG	NA	NA	NA	NA	NA	NA	NA	NA	4581592	4582712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4581711_4582469
ENSMUSG00000004070.16_4582615_4583651_1	chr16	+	372	2	ISM	ENSMUSG00000004070.16	ENSMUST00000118885.8	1392	6	7848	458	7848	-458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCCATGCTAGCAAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	4582614	4583651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4582962_4583626
ENSMUSG00000004070.16_4582772_4583886_1	chr16	+	362	3	ISM	ENSMUSG00000004070.16	ENSMUST00000118885.8	1392	6	8005	223	8005	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGGAAGCCTAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4582771	4583886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4582962_4583626_4583754_4583841
ENSMUSG00000004070.16_4582829_4583932_1	chr16	+	351	3	ISM	ENSMUSG00000004070.16	ENSMUST00000118885.8	1392	6	8062	177	8062	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAGCTGGACTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	4582828	4583932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4582962_4583626_4583754_4583841
ENSMUSG00000004070.16_4582881_4583982_1	chr16	+	349	3	ISM	ENSMUSG00000004070.16	ENSMUST00000118885.8	1392	6	8114	127	8114	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGCATCCTACCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	4582880	4583982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4582962_4583626_4583754_4583841
ENSMUSG00000004070.16_4583624_4584109_1	chr16	+	398	2	ISM	ENSMUSG00000004070.16	ENSMUST00000118885.8	1392	6	8857	0	8857	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCTCTGCCTAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	4583623	4584109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4583754_4583841
ENSMUSG00000004071.14_4584705_4587555_1	chr16	-	2135	3	ISM	ENSMUSG00000004071.14	ENSMUST00000118703.8	2554	6	20601	0	106	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCTATTTTAGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	4587555	4584704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4586514_4586608_4586883_4587503
ENSMUSG00000004071.14_4585203_4607799_1	chr16	-	2020	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	55	1878	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCCTCTGCTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	4607799	4585202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ENSMUSG00000004071.14_4585386_4608130_1	chr16	-	1847	6	FSM	ENSMUSG00000004071.14	ENSMUST00000118703.8	2554	6	26	681	26	-183	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGCCCAGGGTATAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	4608130	4585385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4608015
ENSMUSG00000004071.14_4586156_4587555_1	chr16	-	410	2	FSM	ENSMUSG00000004071.14	ENST00000564828.5	515	2	106	-1	106	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTGCAATTCAGAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	4587555	4586155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_4586514_4587503
ENSMUSG00000004071.14_4586156_4587633_1	chr16	-	487	2	NNC	ENSMUSG00000004071.14	novel	515	2	NA	NA	28	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTGCAATTCAGAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	4587633	4586155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_4586514_4587504
ENSMUSG00000004096.10_14411913_14421661_1	chr9	+	892	7	NNC	ENSMUSG00000004096.10	novel	1111	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATCAATTTGACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	14411912	14421661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419153_14419266_14421495
ENSMUSG00000004096.10_14411913_14421661_2	chr9	+	899	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	0	212	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATCAATTTGACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	14411912	14421661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ENSMUSG00000004096.10_14413251_14421858_1	chr9	+	892	6	ISM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	1338	15	1308	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTTGCTACAATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	14413250	14421858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ENSMUSG00000004096.10_14413284_14421858_1	chr9	+	859	6	ISM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	1371	15	1341	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTTGCTACAATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	14413283	14421858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ENSMUSG00000004096.10_14413313_14421873_1	chr9	+	845	6	ISM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	1400	0	1370	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATACAGCTTATAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	14413312	14421873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ENSMUSG00000004096.10_14414108_14421873_1	chr9	+	802	5	NNC	ENSMUSG00000004096.10	novel	1111	7	NA	NA	2165	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATACAGCTTATAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	14414107	14421873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_14414223_14414893_14414983_14416128_14416237_14419153_14419266_14421495
ENSMUSG00000004096.10_14414108_14421873_2	chr9	+	809	5	ISM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	2195	0	2165	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATACAGCTTATAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	14414107	14421873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ENSMUSG00000004100.13_20799572_20801237_1	chr9	+	537	5	ISM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	101	2237	101	-2237	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCCAGATCTGTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	20799571	20801237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066
ENSMUSG00000004100.13_20799816_20802243_1	chr9	+	502	6	ISM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	345	1231	345	-1231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTTACAGGAGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	20799815	20802243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200
ENSMUSG00000004100.13_20800693_20802423_1	chr9	+	495	6	ISM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	1222	1051	1222	-1051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACACCACAGAACTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	20800692	20802423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378
ENSMUSG00000004100.13_20801181_20802801_1	chr9	+	500	6	ISM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	1710	673	1710	-673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGCTGAAGGCACAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	20801180	20802801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746
ENSMUSG00000004100.13_20801221_20802877_1	chr9	+	536	6	ISM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	1750	597	1750	-597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGAGCCTGGCAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	20801220	20802877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746
ENSMUSG00000004100.13_20802288_20803036_1	chr9	+	514	4	ISM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	2817	438	2817	-438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGAAGGTATGTGGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	20802287	20803036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_20802309_20802378_20802503_20802582_20802662_20802746
ENSMUSG00000004100.13_20802426_20803189_1	chr9	+	515	4	ISM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	2955	285	2955	-285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGGAGCAGAGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	20802425	20803189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_20802503_20802582_20802662_20802746_20803044_20803127
ENSMUSG00000004100.13_20802886_20803474_1	chr9	+	505	2	ISM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	3415	0	3415	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	20802885	20803474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_20803044_20803127
ENSMUSG00000004105.9_33106129_33137023_1	chr2	+	2585	5	FSM	ENSMUSG00000004105.9	ENSMUST00000004208.7	3339	5	48	706	48	-706	multi-exon	FALSE	canonical	NA	NA	NA	NA	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTATTTCTGGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	33106128	33137023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_33106466_33118186_33119045_33132211_33132406_33133690_33133962_33136098
ENSMUSG00000004105.9_33106396_33137285_1	chr2	+	2580	5	FSM	ENSMUSG00000004105.9	ENSMUST00000004208.7	3339	5	315	444	315	-444	multi-exon	FALSE	canonical	NA	NA	NA	NA	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGCTCATGGGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	33106395	33137285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_33106466_33118186_33119045_33132211_33132406_33133690_33133962_33136098
ENSMUSG00000004105.9_33118327_33137399_1	chr2	+	2474	4	NNC	ENSMUSG00000004105.9	novel	3339	5	NA	NA	12246	-330	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACACACTGCAGCAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	33118326	33137399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_33119045_33132221_33132406_33133690_33133962_33136098
ENSMUSG00000004105.9_33118655_33137729_1	chr2	+	2486	4	ISM	ENSMUSG00000004105.9	ENSMUST00000004208.7	3339	5	12574	0	12574	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCCACACTGTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	33118654	33137729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_33119045_33132211_33132406_33133690_33133962_33136098
ENSMUSG00000004127.13_137853235_137860513_1	chr3	+	614	6	ISM	ENSMUSG00000004127.13	ENSMUST00000162864.8	4064	8	3957	5066	3957	-5066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTGTGAAGATGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	137853234	137860513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453
ENSMUSG00000004127.13_137854201_137862589_1	chr3	+	601	6	ISM	ENSMUSG00000004127.13	ENSMUST00000162864.8	4064	8	4923	2990	4923	-2990	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCCCTGCCAGAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	137854200	137862589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ENSMUSG00000004127.13_137858002_137862863_1	chr3	+	605	3	ISM	ENSMUSG00000004127.13	ENSMUST00000162864.8	4064	8	8724	2716	8724	-2716	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAACACTAAGAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	137858001	137862863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_137858103_137860453_137860560_137862465
ENSMUSG00000004127.13_137860465_137862975_1	chr3	+	605	2	ISM	ENSMUSG00000004127.13	ENSMUST00000162864.8	4064	8	11187	2604	11187	-2604	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGTTCGTCACTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	137860464	137862975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_137860560_137862465
ENSMUSG00000004207.15_60113450_60130805_1	chr10	+	749	6	ISM	ENSMUSG00000004207.15	ENSMUST00000105465.8	2646	14	1	7568	0	-7568	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAACTCCAGCTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	60113449	60130805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744
ENSMUSG00000004207.15_60113450_60137697_1	chr10	+	1969	14	FSM	ENSMUSG00000004207.15	ENSMUST00000105465.8	2646	14	1	676	0	-676	multi-exon	FALSE	canonical	NA	NA	NA	NA	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCATCAGCTCCCCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	60113449	60137697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ENSMUSG00000004207.15_60127422_60134897_1	chr10	+	754	7	ISM	ENSMUSG00000004207.15	ENSMUST00000165878.2	2564	14	7139	3479	7139	-3476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGGCTTCTGTAATGA	NA	NA	NA	NA	NA	NA	NA	NA	60127421	60134897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876
ENSMUSG00000004207.15_60127485_60134948_1	chr10	+	742	7	ISM	ENSMUSG00000004207.15	ENSMUST00000165878.2	2564	14	7202	3428	7202	-3425	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCCACCGAGACCATTAA	NA	NA	NA	NA	NA	NA	NA	NA	60127484	60134948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876
ENSMUSG00000004207.15_60128306_60137938_1	chr10	+	1900	12	ISM	ENSMUSG00000004207.15	ENSMUST00000165878.2	2564	14	8023	438	8023	-435	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTGCAGGTGGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	60128305	60137938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ENSMUSG00000004207.15_60129208_60135588_1	chr10	+	705	7	ISM	ENSMUSG00000004207.15	ENSMUST00000165878.2	2564	14	8925	2788	8925	-2785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCACTGCTCCCCGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	60129207	60135588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557
ENSMUSG00000004207.15_60130743_60138377_1	chr10	+	1963	9	ISM	ENSMUSG00000004207.15	ENSMUST00000165878.2	2564	14	10460	-1	10460	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGCCTTGTGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	60130742	60138377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ENSMUSG00000004207.15_60130869_60136042_1	chr10	+	701	6	ISM	ENSMUSG00000004207.15	ENSMUST00000165878.2	2564	14	10586	2334	10586	-2331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGGGCTGCAGCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	60130868	60136042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926
ENSMUSG00000004207.15_60134951_60136596_1	chr10	+	717	6	ISM	ENSMUSG00000004207.15	ENSMUST00000165878.2	2564	14	14668	1780	14668	-1777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAAGTGTGTCTGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	60134950	60136596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552
ENSMUSG00000004207.15_60135285_60137526_1	chr10	+	735	6	ISM	ENSMUSG00000004207.15	ENSMUST00000165878.2	2564	14	15002	850	15002	-847	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTACTTGTGGGTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	60135284	60137526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ENSMUSG00000004207.15_60135727_60137715_1	chr10	+	701	5	ISM	ENSMUSG00000004207.15	ENSMUST00000165878.2	2564	14	15444	661	15444	-658	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCCTTTTCACCCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	60135726	60137715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ENSMUSG00000004207.15_60136327_60138012_1	chr10	+	719	3	ISM	ENSMUSG00000004207.15	ENSMUST00000165878.2	2564	14	16044	364	16044	-361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTTGTTGGGGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	60136326	60138012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_60136398_60136552_60136661_60137472
ENSMUSG00000004221.17_73476544_73487460_1	chrX	+	581	5	NIC	ENSMUSG00000004221.17	novel	997	7	NA	NA	126	-4527	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGCAGCTGCAGCGCG	NA	NA	NA	NA	NA	NA	NA	NA	73476543	73487460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chrX_+_73476613_73477408_73477621_73480772_73480889_73483480_73483582_73487377
ENSMUSG00000004221.17_73476597_73487521_1	chrX	+	589	5	NIC	ENSMUSG00000004221.17	novel	997	7	NA	NA	179	-4466	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCTGTAAGAGTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	73476596	73487521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chrX_+_73476613_73477408_73477621_73480772_73480889_73483480_73483582_73487377
ENSMUSG00000004221.17_73477471_73491526_1	chrX	+	575	5	ISM	ENSMUSG00000004221.17	ENST00000611176.4	997	7	1053	461	1053	-461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGAACAAGTGGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	73477470	73491526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73477621_73480769_73480889_73483480_73483582_73487377_73487521_73491464
ENSMUSG00000004221.17_73477471_73491835_1	chrX	+	588	6	ISM	ENSMUSG00000004221.17	ENST00000611176.4	997	7	1053	152	1053	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGGCCTTGTCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	73477470	73491835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73477621_73480769_73480889_73483480_73483582_73487377_73487521_73491464_73491527_73491822
ENSMUSG00000004221.17_73480824_73491987_1	chrX	+	536	5	ISM	ENSMUSG00000004221.17	ENST00000611176.4	997	7	4406	0	4406	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTACTATGTCCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	73480823	73491987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73480889_73483480_73483582_73487377_73487521_73491464_73491527_73491822
ENSMUSG00000004231.16_44745833_44825387_1	chr19	+	2106	10	FSM	ENSMUSG00000004231.16	ENSMUST00000174490.9	4358	10	1349	903	0	-903	multi-exon	TRUE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGGCGCAAAAAGCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	44745832	44825387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_44745876_44749313_44749483_44750126_44750325_44777215_44777302_44779121_44779242_44804346_44804523_44806864_44806992_44821604_44821707_44823829_44823917_44824389
ENSMUSG00000004231.16_44749317_44825490_1	chr19	+	2163	9	ISM	ENSMUSG00000004231.16	ENST00000361791.7	3062	10	3525	815	3484	-800	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGCAGGAGCTGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	44749316	44825490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44749483_44750126_44750325_44777215_44777302_44779121_44779242_44804346_44804523_44806864_44806992_44821604_44821707_44823829_44823917_44824389
ENSMUSG00000004231.16_44750212_44825671_1	chr19	+	2093	8	ISM	ENSMUSG00000004231.16	ENST00000361791.7	3062	10	4420	634	4379	-619	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGTACCATAGAGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	44750211	44825671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44750325_44777215_44777302_44779121_44779242_44804346_44804523_44806864_44806992_44821604_44821707_44823829_44823917_44824389
ENSMUSG00000004231.16_44779150_44825902_1	chr19	+	2097	6	ISM	ENSMUSG00000004231.16	ENST00000361791.7	3062	10	33358	403	33317	-388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCTCGCCTGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	44779149	44825902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44779242_44804346_44804523_44806864_44806992_44821604_44821707_44823829_44823917_44824389
ENSMUSG00000004231.16_44779196_44825964_1	chr19	+	2113	6	ISM	ENSMUSG00000004231.16	ENST00000361791.7	3062	10	33404	341	33363	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTTCATCTCCCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	44779195	44825964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44779242_44804346_44804523_44806864_44806992_44821604_44821707_44823829_44823917_44824389
ENSMUSG00000004231.16_44804483_44826119_1	chr19	+	2086	5	ISM	ENSMUSG00000004231.16	ENSMUST00000004340.11	3095	11	58650	191	58650	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGTGCCCGACCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	44804482	44826119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44804523_44806864_44806992_44821604_44821707_44823829_44823917_44824389
ENSMUSG00000004231.16_44806896_44826290_1	chr19	+	2186	4	ISM	ENSMUSG00000004231.16	ENSMUST00000004340.11	3095	11	61063	20	61063	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTTGAACAAATCCGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	44806895	44826290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44806992_44821604_44821707_44823829_44823917_44824389
ENSMUSG00000004231.16_44806897_44826290_1	chr19	+	2185	4	ISM	ENSMUSG00000004231.16	ENSMUST00000004340.11	3095	11	61064	20	61064	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTTGAACAAATCCGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	44806896	44826290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44806992_44821604_44821707_44823829_44823917_44824389
ENSMUSG00000004231.16_44806948_44826290_1	chr19	+	2134	4	ISM	ENSMUSG00000004231.16	ENSMUST00000004340.11	3095	11	61115	20	61115	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTTGAACAAATCCGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	44806947	44826290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44806992_44821604_44821707_44823829_44823917_44824389
ENSMUSG00000004233.15_99112599_99125216_1	chr3	+	1589	3	ISM	ENSMUSG00000004233.15	ENSMUST00000004343.7	4410	6	64215	2303	64187	1299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAGGCTGAAATACTGA	NA	NA	NA	NA	NA	NA	NA	NA	99112598	99125216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_99112627_99121971_99122091_99123774
ENSMUSG00000004263.16_124719507_124722011_1	chr6	-	1216	4	ISM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	11476	0	11476	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGACGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	124722011	124719506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682
ENSMUSG00000004263.16_124719761_124722263_1	chr6	-	1214	4	ISM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	11224	254	11224	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAATCCTTGGTGGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	124722263	124719760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682
ENSMUSG00000004263.16_124722672_124724036_1	chr6	-	1207	2	ISM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	9451	3165	9451	-3165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCGAGCGCGAGCGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	124724036	124722671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124722825_124722982
ENSMUSG00000004263.16_124723945_124726525_1	chr6	-	1223	3	ISM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	6962	4438	6962	-4438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCCCATCCCAAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	124726525	124723944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124724953_124726198_124726313_124726424
ENSMUSG00000004263.16_124724262_124733346_1	chr6	-	1206	5	ISM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	141	4755	141	-4755	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCAATCCCTGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	124733346	124724261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124724953_124726198_124726313_124726424_124726563_124726709_124726885_124733258
ENSMUSG00000004264.18_124689299_124693603_1	chr6	+	1002	9	NIC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	0	-187	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAAGAACCCCACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	124689298	124693603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692994_124693568
ENSMUSG00000004264.18_124689299_124693603_2	chr6	+	1005	9	NNC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	0	-187	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAAGAACCCCACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	124689298	124693603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692137_124692551_124692623_124692916_124692994_124693568
ENSMUSG00000004264.18_124689299_124693792_1	chr6	+	1111	8	NNC	ENSMUSG00000004264.18	novel	1086	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGGTGGGACAATGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	124689298	124693792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692137_124692551_124692623_124693574
ENSMUSG00000004264.18_124689299_124693792_2	chr6	+	1116	8	NNC	ENSMUSG00000004264.18	novel	1086	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGGTGGGACAATGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	124689298	124693792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692135_124692544_124692623_124693574
ENSMUSG00000004264.18_124689299_124693792_3	chr6	+	614	4	FSM	ENSMUSG00000004264.18	ENST00000546111.5	839	4	113	112	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGGTGGGACAATGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	124689298	124693792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_124689527_124689666_124689752_124692916_124692994_124693568
ENSMUSG00000004264.18_124689299_124693792_4	chr6	+	1108	8	FSM	ENSMUSG00000004264.18	ENST00000542912.5	1086	8	-20	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGGTGGGACAATGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	124689298	124693792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124693574
ENSMUSG00000004264.18_124689299_124693792_5	chr6	+	1350	8	FSM	ENSMUSG00000004264.18	ENST00000399433.7	1517	8	55	112	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGGTGGGACAATGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	124689298	124693792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692554_124692623_124692916_124692994_124693295
ENSMUSG00000004264.18_124689299_124693792_6	chr6	+	1191	9	NIC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	5537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGGTGGGACAATGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	124689298	124693792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692994_124693568
ENSMUSG00000004264.18_124689729_124693913_2	chr6	+	445	3	ISM	ENSMUSG00000004264.18	ENST00000546111.5	839	4	543	-9	410	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTGAGTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	124689728	124693913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124689752_124692916_124692994_124693568
ENSMUSG00000004264.18_124689729_124693913_3	chr6	+	1181	7	ISM	ENSMUSG00000004264.18	ENST00000399433.7	1517	8	485	-9	410	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTGAGTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	124689728	124693913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692554_124692623_124692916_124692994_124693295
ENSMUSG00000004264.18_124689729_124693913_4	chr6	+	1022	8	NIC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	410	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	2998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTGAGTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	124689728	124693913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692994_124693568
ENSMUSG00000004266.16_124698071_124704374_1	chr6	-	851	7	ISM	ENSMUSG00000004266.16	ENST00000456013.5	2168	15	5784	28	5743	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCATTCGTCTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	124704374	124698070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124698292_124698534_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347
ENSMUSG00000004266.16_124698200_124704738_1	chr6	-	905	8	ISM	ENSMUSG00000004266.16	ENST00000456013.5	2168	15	5420	157	5379	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCCAACCCCAGGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	124704738	124698199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124698292_124698534_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678
ENSMUSG00000004266.16_124698571_124705147_1	chr6	-	870	8	ISM	ENSMUSG00000004266.16	ENST00000456013.5	2168	15	5011	528	4970	-500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACGCCAAAGCCTCGCG	NA	NA	NA	NA	NA	NA	NA	NA	124705147	124698570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074
ENSMUSG00000004266.16_124698729_124705368_1	chr6	-	900	8	ISM	ENSMUSG00000004266.16	ENST00000456013.5	2168	15	4790	686	4749	-658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTGTCCGGAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	124705368	124698728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299
ENSMUSG00000004266.16_124698841_124705568_1	chr6	-	891	9	ISM	ENSMUSG00000004266.16	ENST00000456013.5	2168	15	4590	798	4549	-770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTACGAGCACAGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	124705568	124698840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510
ENSMUSG00000004266.16_124698973_124705671_1	chr6	-	958	8	ISM	ENSMUSG00000004266.16	ENST00000456013.5	2168	15	4487	930	4446	-902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGAGCCCTGGGGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	124705671	124698972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510
ENSMUSG00000004266.16_124701947_124705850_1	chr6	-	925	8	ISM	ENSMUSG00000004266.16	ENST00000456013.5	2168	15	4308	3904	4267	-3876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGGCCCATCATTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	124705850	124701946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743
ENSMUSG00000004266.16_124702250_124709341_1	chr6	-	899	8	ISM	ENSMUSG00000004266.16	ENST00000456013.5	2168	15	817	4207	776	-4179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAGCATGACACAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	124709341	124702249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262
ENSMUSG00000004266.16_124704467_124709757_1	chr6	-	881	8	ISM	ENSMUSG00000004266.16	ENST00000456013.5	2168	15	401	6424	360	-6396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTACATCGCCAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	124709757	124704466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700
ENSMUSG00000004266.16_124705127_124710045_1	chr6	-	921	7	ISM	ENSMUSG00000004266.16	ENST00000456013.5	2168	15	113	7084	72	-7056	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAGCGGCCAGAGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	124710045	124705126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
ENSMUSG00000004268.12_124681345_124682622_1	chr6	-	631	4	ISM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	6519	1	6519	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCAGACCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	124682622	124681344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477
ENSMUSG00000004268.12_124681558_124688907_1	chr6	-	586	6	FSM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	234	214	234	-214	multi-exon	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGCTAAAGTCACCACA	NA	NA	NA	NA	NA	NA	NA	NA	124688907	124681557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
ENSMUSG00000004268.12_124681914_124689020_1	chr6	-	623	5	ISM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	121	570	121	-570	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCATGGCAAGGTACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	124689020	124681913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
ENSMUSG00000004268.12_124682123_124689141_1	chr6	-	604	4	ISM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	0	779	0	-779	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAAGCCGGAGAAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	124689141	124682122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124682180_124682477_124682620_124682703_124682806_124688838
ENSMUSG00000004270.14_124639990_124680348_1	chr6	+	1529	11	ISM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	0	1033	0	-1033	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTGAAGACCTGTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	124639989	124680348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189
ENSMUSG00000004270.14_124640278_124680891_1	chr6	+	1503	13	FSM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	288	490	288	-490	multi-exon	TRUE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTTGTGGGAGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	124640277	124680891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ENSMUSG00000004270.14_124675032_124680891_1	chr6	+	1454	12	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	35042	-490	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTTGTGGGAGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	124675031	124680891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680194_124680349_124680457_124680591_124680762
ENSMUSG00000004270.14_124676997_124681081_1	chr6	+	1406	10	ISM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	37007	300	37007	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATCTTGGAACTATACCA	NA	NA	NA	NA	NA	NA	NA	NA	124676996	124681081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ENSMUSG00000004270.14_124677709_124681333_1	chr6	+	1480	8	ISM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	37719	48	37719	-48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAAAACGAAA	NA	NA	NA	NA	NA	NA	NA	NA	124677708	124681333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ENSMUSG00000004270.14_124677777_124681333_1	chr6	+	1412	8	ISM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	37787	48	37787	-48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAAAACGAAA	NA	NA	NA	NA	NA	NA	NA	NA	124677776	124681333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ENSMUSG00000004270.14_124678382_124681381_1	chr6	+	1467	7	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	38392	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATACAGTGTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	124678381	124681381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680194_124680349_124680457_124680591_124680762
ENSMUSG00000004285.13_29467717_29470511_1	chr6	+	698	2	NNC	ENSMUSG00000004285.13	novel	703	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTACTGGTATGGATACG	NA	NA	NA	NA	NA	NA	NA	NA	29467716	29470511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_29467967_29470063
ENSMUSG00000004317.15_7022891_7032166_1	chrX	-	4319	5	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	20756	-2509	20756	2509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATGTGAAATAATCGCTA	NA	NA	NA	NA	NA	NA	NA	NA	7032166	7022890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818
ENSMUSG00000004317.15_7022997_7032254_1	chrX	-	4301	5	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	20668	-2403	20668	2403	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAACTGCTAAATTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	7032254	7022996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818
ENSMUSG00000004317.15_7023043_7032322_1	chrX	-	4323	5	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	20600	-2357	20600	2357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGTCTAGCTGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	7032322	7023042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818
ENSMUSG00000004317.15_7023292_7036660_1	chrX	-	4307	7	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	16262	-2108	16262	2108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAATTAGATATTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	7036660	7023291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547
ENSMUSG00000004317.15_7023585_7044649_1	chrX	-	4341	9	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	8273	-1815	8273	1815	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	853	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGATGCTAAGCACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	7044649	7023584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539
ENSMUSG00000004317.15_7023860_7052520_1	chrX	-	4342	11	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	402	-1540	402	1540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1076	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTCCTGTGGGTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	7052520	7023859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422
ENSMUSG00000004317.15_7025930_7028235_1	chrX	-	745	3	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	24687	530	24687	-530	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACCATGGATATATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	7028235	7025929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7026059_7027474_7027692_7027836
ENSMUSG00000004317.15_7029664_7032675_1	chrX	-	716	3	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	20247	4264	20247	-4264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGACTGGGGCATCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	7032675	7029663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7029756_7031818_7032362_7032594
ENSMUSG00000004317.15_7031996_7037427_1	chrX	-	699	4	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	15495	6596	15495	-6596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCGGCCTCCTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	7037427	7031995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7032362_7032594_7032676_7036547_7036755_7037382
ENSMUSG00000004317.15_7032634_7052458_1	chrX	-	696	6	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	464	7234	464	-7234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCCCTATTGGTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	7052458	7032633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422
ENSMUSG00000004317.15_7036683_7052768_1	chrX	-	728	6	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	154	11283	154	-11283	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGTGTTGGCGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	7052768	7036682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7052675
ENSMUSG00000004317.15_7037438_7052892_1	chrX	-	725	5	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	30	12038	30	-12038	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTCTTGTCAAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	7052892	7037437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7052675
ENSMUSG00000004319.16_61365904_61372592_1	chr8	-	525	2	ISM	ENSMUSG00000004319.16	ENSMUST00000056508.12	5684	12	35675	2481	21861	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTACCTGGAACAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	61372592	61365903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61366210_61372373
ENSMUSG00000004319.16_61372380_61376132_1	chr8	-	520	2	ISM	ENSMUSG00000004319.16	ENSMUST00000110302.8	3768	13	31650	7450	18321	-6476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACGGGTAAGTTTAACACT	NA	NA	NA	NA	NA	NA	NA	NA	61376132	61372379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61372591_61375823
ENSMUSG00000004319.16_61375986_61382205_1	chr8	-	525	3	ISM	ENSMUSG00000004319.16	ENSMUST00000110302.8	3768	13	25577	11056	12248	6098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACCCTCCCTTAGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	61382205	61375985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61376223_61380265_61380453_61382104
ENSMUSG00000004319.16_61380279_61382457_1	chr8	-	527	2	ISM	ENSMUSG00000004319.16	ENSMUST00000110302.8	3768	13	25325	15349	11996	1805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTGCTTAGGTAATAG	NA	NA	NA	NA	NA	NA	NA	NA	61382457	61380278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61380453_61382104
ENSMUSG00000004319.16_61382084_61394453_1	chr8	-	1012	4	NNC	ENSMUSG00000004319.16	novel	1013	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1927	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGGAATAATGATATCTC	NA	NA	NA	NA	NA	NA	NA	NA	61394453	61382083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_61382646_61390333_61390522_61391581_61391682_61394291
ENSMUSG00000004319.16_61382084_61394453_2	chr8	-	1005	4	NNC	ENSMUSG00000004319.16	novel	1013	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1931	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGGAATAATGATATCTC	NA	NA	NA	NA	NA	NA	NA	NA	61394453	61382083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_61382646_61390333_61390522_61391581_61391674_61394290
ENSMUSG00000004319.16_61382084_61394453_3	chr8	-	1013	4	FSM	ENSMUSG00000004319.16	ENST00000423965.2	1013	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGGAATAATGATATCTC	NA	NA	NA	NA	NA	NA	NA	NA	61394453	61382083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_61382646_61390333_61390522_61391581_61391682_61394290
ENSMUSG00000004319.16_61382084_61394453_4	chr8	-	1011	4	NNC	ENSMUSG00000004319.16	novel	1013	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1934	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGGAATAATGATATCTC	NA	NA	NA	NA	NA	NA	NA	NA	61394453	61382083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_61382646_61390333_61390522_61391583_61391682_61394290
ENSMUSG00000004319.16_61382193_61386168_1	chr8	-	512	2	ISM	ENSMUSG00000004319.16	ENST00000360642.7	2609	11	42775	16289	8285	-109	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGTTGGAGTATATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	61386168	61382192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61382651_61386114
ENSMUSG00000004319.16_61382255_61386229_1	chr8	-	511	2	ISM	ENSMUSG00000004319.16	ENST00000360642.7	2609	11	42714	16351	8224	-171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGACTACAGAAATGACAT	NA	NA	NA	NA	NA	NA	NA	NA	61386229	61382254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61382651_61386114
ENSMUSG00000004319.16_61382522_61390393_1	chr8	-	519	4	ISM	ENSMUSG00000004319.16	ENST00000360642.7	2609	11	38550	16618	4060	-438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCATGGTACCTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	61390393	61382521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61382651_61386114_61386322_61387518_61387642_61390333
ENSMUSG00000004319.16_61382575_61390444_1	chr8	-	517	4	ISM	ENSMUSG00000004319.16	ENST00000360642.7	2609	11	38499	16671	4009	-491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCAATCCATTTGGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	61390444	61382574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61382651_61386114_61386322_61387518_61387642_61390333
ENSMUSG00000004319.16_61390398_61428888_1	chr8	-	505	4	ISM	ENSMUSG00000004319.16	ENST00000360642.7	2609	11	55	24494	55	-8314	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAGAGGGATAAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	61428888	61390397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61390522_61391581_61391682_61394290_61394449_61428765
ENSMUSG00000004328.16_16776513_16794775_1	chr7	-	1300	10	NNC	ENSMUSG00000004328.16	novel	1313	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAACCAGCATGAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	16794775	16776512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_16776616_16778301_16778493_16778779_16778893_16782538_16782687_16782924_16783032_16784473_16784683_16785057_16785171_16785846_16785932_16790185_16790376_16794734
ENSMUSG00000004328.16_16776513_16794775_2	chr7	-	1295	10	NNC	ENSMUSG00000004328.16	novel	1313	10	NA	NA	12	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAACCAGCATGAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	16794775	16776512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_16776616_16778301_16778493_16778779_16778893_16782538_16782687_16782924_16783032_16784473_16784683_16785057_16785171_16785846_16785926_16790184_16790376_16794734
ENSMUSG00000004328.16_16776513_16794775_3	chr7	-	1293	10	NNC	ENSMUSG00000004328.16	novel	1313	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAACCAGCATGAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	16794775	16776512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_16776616_16778301_16778493_16778779_16778885_16782538_16782687_16782924_16783032_16784473_16784683_16785057_16785171_16785846_16785932_16790184_16790376_16794734
ENSMUSG00000004328.16_16776513_16794775_4	chr7	-	1301	10	FSM	ENSMUSG00000004328.16	ENST00000472815.5	1313	10	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAACCAGCATGAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	16794775	16776512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_16776616_16778301_16778493_16778779_16778893_16782538_16782687_16782924_16783032_16784473_16784683_16785057_16785171_16785846_16785932_16790184_16790376_16794734
ENSMUSG00000004328.16_16776513_16794775_5	chr7	-	1294	10	NNC	ENSMUSG00000004328.16	novel	1313	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1977	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAACCAGCATGAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	16794775	16776512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_16776616_16778301_16778493_16778779_16778893_16782538_16782680_16782924_16783032_16784473_16784683_16785057_16785171_16785846_16785932_16790184_16790376_16794734
ENSMUSG00000004341.9_21497869_21503261_1	chr13	+	436	3	FSM	ENSMUSG00000004341.9	ENST00000474923.1	489	3	53	0	53	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAAATTTTGTCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	21497868	21503261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_21497972_21501154_21501273_21503046
ENSMUSG00000004347.18_56049296_56103903_1	chr6	-	272	4	ISM	ENSMUSG00000004347.18	ENST00000321453.12	2248	19	235525	130	235393	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCCGAAGAAAACTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	56103903	56049295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_56049361_56068347_56068417_56099976_56100055_56103843
ENSMUSG00000004347.18_56158691_56339389_1	chr6	-	283	4	ISM	ENSMUSG00000004347.18	ENST00000321453.12	2248	19	39	109525	-12	-75534	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTATATATTGATGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	56339389	56158690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_56158783_56322110_56322138_56338729_56338833_56339328
ENSMUSG00000004356.9_88582790_88594263_1	chr10	-	1886	14	ISM	ENSMUSG00000004356.9	ENST00000261637.5	8545	62	68408	38	68403	-38	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTTAGCAATGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	88594263	88582789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165
ENSMUSG00000004356.9_88585172_88598751_1	chr10	-	1884	14	ISM	ENSMUSG00000004356.9	ENST00000261637.5	8545	62	63920	2420	63915	-2420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGAATGGCTAAGCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	88598751	88585171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630
ENSMUSG00000004356.9_88590384_88604682_1	chr10	-	1878	14	ISM	ENSMUSG00000004356.9	ENST00000261637.5	8545	62	57989	7632	57984	-7632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGCTCTTTGGGCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	88604682	88590383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496
ENSMUSG00000004356.9_88590455_88604756_1	chr10	-	1881	14	ISM	ENSMUSG00000004356.9	ENST00000261637.5	8545	62	57915	7703	57910	-7703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCATGTGCAAGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	88604756	88590454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496
ENSMUSG00000004356.9_88593733_88607846_1	chr10	-	1915	13	ISM	ENSMUSG00000004356.9	ENST00000261637.5	8545	62	54825	10981	54820	-10981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTCTTCTAAAGGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	88607846	88593732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723
ENSMUSG00000004356.9_88596732_88608869_1	chr10	-	1938	13	ISM	ENSMUSG00000004356.9	ENST00000261637.5	8545	62	53802	13980	53797	-13980	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCACTGGCCCGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	88608869	88596731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713
ENSMUSG00000004356.9_88603022_88614251_1	chr10	-	1896	14	ISM	ENSMUSG00000004356.9	ENSMUST00000004470.9	8821	62	48415	20553	48415	-20270	internal_fragment	TRUE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCAGCACCCTCTCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	88614251	88603021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084
ENSMUSG00000004356.9_88606592_88623431_1	chr10	-	1883	14	ISM	ENSMUSG00000004356.9	ENSMUST00000004470.9	8821	62	39235	24123	39235	-23840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTCTTGCAGTCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	88623431	88606591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316
ENSMUSG00000004356.9_88607753_88627008_1	chr10	-	1907	14	ISM	ENSMUSG00000004356.9	ENSMUST00000004470.9	8821	62	35658	25284	35658	-25001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAATTCTTGATGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	88627008	88607752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912
ENSMUSG00000004356.9_88610593_88634215_1	chr10	-	1911	15	ISM	ENSMUSG00000004356.9	ENSMUST00000004470.9	8821	62	28451	28124	28451	-27841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTGGATGCGGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	88634215	88610592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142
ENSMUSG00000004356.9_88613331_88640483_1	chr10	-	1894	14	ISM	ENSMUSG00000004356.9	ENSMUST00000004470.9	8821	62	22183	30862	22183	-30579	internal_fragment	TRUE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAAGGTGAAGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	88640483	88613330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384
ENSMUSG00000004356.9_88614181_88643234_1	chr10	-	1886	15	ISM	ENSMUSG00000004356.9	ENST00000261637.5	8545	62	19437	31429	19432	-31429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCTCCTCAACCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	88643234	88614180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188
ENSMUSG00000004356.9_88626990_88652847_1	chr10	-	1902	16	ISM	ENSMUSG00000004356.9	ENST00000261637.5	8545	62	9824	44238	9819	-44238	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATTTCAACATCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	88652847	88626989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739
ENSMUSG00000004356.9_88628480_88653159_1	chr10	-	1894	15	ISM	ENSMUSG00000004356.9	ENST00000261637.5	8545	62	9512	45728	9507	-45728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGAGTTGTATCTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	88653159	88628479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040
ENSMUSG00000004356.9_88631319_88653839_1	chr10	-	1882	15	ISM	ENSMUSG00000004356.9	ENST00000261637.5	8545	62	8832	48567	8827	-48567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGATGAGGAACTGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	88653839	88631318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727
ENSMUSG00000004356.9_88634168_88654454_1	chr10	-	1896	15	ISM	ENSMUSG00000004356.9	ENST00000261637.5	8545	62	8217	51416	8212	-51416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTTTTCCTGAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	88654454	88634167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350
ENSMUSG00000004356.9_88640416_88657691_1	chr10	-	1887	15	ISM	ENSMUSG00000004356.9	ENST00000261637.5	8545	62	4980	57664	4975	-57664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGCAGTCCCTCAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	88657691	88640415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601
ENSMUSG00000004393.11_6208919_6215597_1	chr11	-	1099	9	ISM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	2175	0	2126	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTGTCTGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	6215597	6208918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511
ENSMUSG00000004393.11_6208919_6215618_1	chr11	-	1115	9	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	2105	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTGTCTGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	6215618	6208918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214029_6214123_6214238_6214675_6214796_6215511
ENSMUSG00000004393.11_6208919_6215647_1	chr11	-	1149	9	ISM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	2125	0	2076	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTGTCTGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	6215647	6208918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511
ENSMUSG00000004393.11_6209101_6216392_1	chr11	-	1153	10	ISM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	1380	182	1331	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTCAGTGTGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	6216392	6209100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315
ENSMUSG00000004393.11_6209167_6216392_1	chr11	-	1087	10	ISM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	1380	248	1331	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACACTGAATTGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	6216392	6209166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315
ENSMUSG00000004393.11_6209240_6216543_1	chr11	-	1060	11	ISM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	1229	321	1180	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCGTGACTTTAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	6216543	6209239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511
ENSMUSG00000004393.11_6211621_6216889_1	chr11	-	1180	10	ISM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	883	2702	834	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTGAGTGTGGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	6216889	6211620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810
ENSMUSG00000004393.11_6211650_6216596_1	chr11	-	866	8	ISM	ENSMUSG00000004393.11	ENST00000431640.5	1368	11	1127	29	1127	-29	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	682	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTCATTTGGGCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	6216596	6211649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6215511_6215757_6216315_6216407_6216511
ENSMUSG00000004393.11_6212457_6216889_1	chr11	-	1079	9	ISM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	883	3538	834	-836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGCTTGGAGCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	6216889	6212456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810
ENSMUSG00000004393.11_6212662_6216889_1	chr11	-	870	7	ISM	ENSMUSG00000004393.11	ENST00000431640.5	1368	11	834	1041	834	-1041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTTGACAAAGGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	6216889	6212661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6212737_6213938_6214034_6214123_6214238_6215511_6215757_6216315_6216407_6216511_6216683_6216810
ENSMUSG00000004393.11_6212698_6217447_1	chr11	-	1066	9	ISM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	325	3779	276	-1077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGAGATTGAAAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	6217447	6212697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417
ENSMUSG00000004393.11_6213939_6217579_1	chr11	-	1159	8	ISM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	193	5020	144	-2318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGCCCGTGGTATGAC	NA	NA	NA	NA	NA	NA	NA	NA	6217579	6213938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417
ENSMUSG00000004393.11_6214014_6217457_1	chr11	-	842	7	ISM	ENSMUSG00000004393.11	ENST00000431640.5	1368	11	266	2393	266	-2393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCATAGTTCTGACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	6217457	6214013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6214034_6214123_6214238_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417
ENSMUSG00000004393.11_6214123_6217581_1	chr11	-	947	6	ISM	ENSMUSG00000004393.11	ENST00000431640.5	1368	11	142	2502	142	-2502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGGATGGGGCGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	6217581	6214122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6214238_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417
ENSMUSG00000004393.11_6214202_6217746_1	chr11	-	1073	8	ISM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	26	5283	-23	-2581	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTCCACCACGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	6217746	6214201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ENSMUSG00000004394.13_6220369_6224498_1	chr11	-	1806	4	ISM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	372	0	372	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTCTCCCTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	6224498	6220368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397
ENSMUSG00000004394.13_6220544_6224865_1	chr11	-	1823	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	5	175	5	-175	multi-exon	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACAACAGGTTAGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	6224865	6220543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
ENSMUSG00000004394.13_6220570_6224865_1	chr11	-	1797	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	5	201	5	-201	multi-exon	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCGGTAAAATACTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	6224865	6220569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
ENSMUSG00000004394.13_6220579_6224865_1	chr11	-	1788	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	5	210	5	-210	multi-exon	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACCCTCATCGGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	6224865	6220578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
ENSMUSG00000004394.13_6220626_6224865_1	chr11	-	1741	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	5	257	5	-257	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTTGGAGAAAACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	6224865	6220625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
ENSMUSG00000004446.13_120870954_120872673_1	chr6	-	394	2	ISM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	21141	1139	21141	-1139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAGTGACTGTTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	120872673	120870953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120871254_120872579
ENSMUSG00000004446.13_120871016_120872713_1	chr6	-	372	2	ISM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	21101	1201	21101	-1201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCCCACTTGGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	120872713	120871015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120871254_120872579
ENSMUSG00000004446.13_120871123_120874219_1	chr6	-	383	3	ISM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	19595	1308	19595	-1308	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGCTGGTGATTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	120874219	120871122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120871254_120872579_120872793_120874180
ENSMUSG00000004446.13_120871178_120874267_1	chr6	-	376	3	ISM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	19547	1363	19547	-1363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGAAGACAGGTCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	120874267	120871177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120871254_120872579_120872793_120874180
ENSMUSG00000004446.13_120871233_120874320_1	chr6	-	374	3	ISM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	19494	1418	19494	-1418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCCCGATGGTGACACT	NA	NA	NA	NA	NA	NA	NA	NA	120874320	120871232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120871254_120872579_120872793_120874180
ENSMUSG00000004446.13_120874275_120893759_1	chr6	-	388	4	ISM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	55	4460	55	-4460	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCCCAAATAGGCGATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	120893759	120874274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120874321_120877116_120877328_120878683_120878750_120893694
ENSMUSG00000004451.15_119399358_119403712_1	chr1	-	286	2	ISM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	28812	1323	28812	-1323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGCTCTCCACAACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	119403712	119399357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_119399556_119403624
ENSMUSG00000004451.15_119399427_119405667_1	chr1	-	330	3	ISM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	26857	1392	26857	-1392	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGACGCAGCAGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	119405667	119399426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_119399556_119403624_119403803_119405644
ENSMUSG00000004451.15_119399508_119405703_1	chr1	-	285	3	ISM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	26821	1473	26821	-1473	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGGACAAGAACGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	119405703	119399507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_119399556_119403624_119403803_119405644
ENSMUSG00000004451.15_119403768_119411283_1	chr1	-	304	3	ISM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	21241	5733	21241	-5733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCCACTGCTGGTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	119411283	119403767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_119403803_119405644_119405854_119411223
ENSMUSG00000004451.15_119405781_119432343_1	chr1	-	273	3	ISM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	181	7746	181	-7746	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGACATCCTGGACACC	NA	NA	NA	NA	NA	NA	NA	NA	119432343	119405780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_119405854_119411223_119411387_119432306
ENSMUSG00000004460.18_22676595_22691058_1	chr16	+	1842	10	NNC	ENSMUSG00000004460.18	novel	1927	10	NA	NA	0	-80	intron_retention	FALSE	canonical	NA	NA	NA	NA	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTTTGAGAGAACATAT	NA	NA	NA	NA	NA	NA	NA	NA	22676594	22691058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688170_22688224_22689320_22689433_22689689_22689850_22690420
ENSMUSG00000004460.18_22676616_22691058_1	chr16	+	1821	10	NNC	ENSMUSG00000004460.18	novel	2513	11	NA	NA	0	-80	intron_retention	FALSE	canonical	NA	NA	NA	NA	1074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTTTGAGAGAACATAT	NA	NA	NA	NA	NA	NA	NA	NA	22676615	22691058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688219_22689320_22689433_22689689_22689850_22690420
ENSMUSG00000004460.18_22676616_22691138_1	chr16	+	1901	10	NNC	ENSMUSG00000004460.18	novel	1927	10	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2024	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGTATCTGTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	22676615	22691138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_22676860_22681296_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ENSMUSG00000004460.18_22676739_22691138_1	chr16	+	1778	10	NNC	ENSMUSG00000004460.18	novel	1927	10	NA	NA	123	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGTATCTGTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	22676738	22691138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687599_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ENSMUSG00000004460.18_22676739_22691138_2	chr16	+	1777	10	NNC	ENSMUSG00000004460.18	novel	1927	10	NA	NA	123	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGTATCTGTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	22676738	22691138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685797_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ENSMUSG00000004460.18_22676739_22691138_3	chr16	+	1778	10	NNC	ENSMUSG00000004460.18	novel	1927	10	NA	NA	123	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGTATCTGTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	22676738	22691138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688170_22688224_22689320_22689433_22689689_22689850_22690420
ENSMUSG00000004460.18_22676739_22691138_4	chr16	+	1778	10	NNC	ENSMUSG00000004460.18	novel	1927	10	NA	NA	123	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGTATCTGTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	22676738	22691138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687875_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ENSMUSG00000004460.18_22676739_22691138_5	chr16	+	1783	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	144	0	123	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGTATCTGTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	22676738	22691138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ENSMUSG00000004460.18_22676739_22691138_6	chr16	+	1778	10	NNC	ENSMUSG00000004460.18	novel	1927	10	NA	NA	123	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGTATCTGTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	22676738	22691138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688219_22689320_22689433_22689689_22689850_22690420
ENSMUSG00000004462.8_22631970_22660819_1	chr16	-	2434	7	ISM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	15598	0	15598	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTTACTGTGCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	22660819	22631969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478
ENSMUSG00000004462.8_22632111_22676169_1	chr16	-	2406	8	FSM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	250	147	248	-141	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTAGGCCTTAACATAT	NA	NA	NA	NA	NA	NA	NA	NA	22676169	22632110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
ENSMUSG00000004462.8_22632111_22676290_1	chr16	-	2527	8	FSM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	129	147	127	-141	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTAGGCCTTAACATAT	NA	NA	NA	NA	NA	NA	NA	NA	22676290	22632110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
ENSMUSG00000004473.11_43954240_43955337_1	chr7	-	314	2	ISM	ENSMUSG00000004473.11	ENST00000599973.1	1045	4	852	275	852	-275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACAACTGGCCGGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	43955337	43954239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_43954469_43955252
ENSMUSG00000004473.11_43954423_43955745_1	chr7	-	287	3	ISM	ENSMUSG00000004473.11	ENST00000599973.1	1045	4	444	458	444	-458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTACACACAGGCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	43955745	43954422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_43954469_43955252_43955445_43955696
ENSMUSG00000004473.11_43955406_43956093_1	chr7	-	292	3	ISM	ENSMUSG00000004473.11	ENST00000599973.1	1045	4	96	1441	96	-1441	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACGTCCGTCTGCACGTT	NA	NA	NA	NA	NA	NA	NA	NA	43956093	43955405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_43955445_43955696_43955899_43956042
ENSMUSG00000004530.13_113981537_113983328_1	chr5	-	1100	2	ISM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	63491	1040	63491	-1040	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGGACAAGGGCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	113983328	113981536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113982530_113983221
ENSMUSG00000004530.13_113981594_113983389_1	chr5	-	1104	2	ISM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	63430	1097	63430	-1097	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCTCCACAGATGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	113983389	113981593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113982530_113983221
ENSMUSG00000004530.13_113981795_113985681_1	chr5	-	1226	4	ISM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	61138	1298	61138	-1298	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGTTAGTCTAACGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	113985681	113981794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494
ENSMUSG00000004530.13_113981933_113986661_1	chr5	-	1121	5	ISM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	60158	1436	60158	-1436	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCTCAATTTAAAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	113986661	113981932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587
ENSMUSG00000004530.13_113982054_113987731_1	chr5	-	1173	6	ISM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	59088	1557	59088	-1557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAAACCGAAAGTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	113987731	113982053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589
ENSMUSG00000004530.13_113982173_113988811_1	chr5	-	1132	7	ISM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	58008	1676	58008	-1676	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGCCAGATGTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	113988811	113982172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711
ENSMUSG00000004530.13_113982318_113990275_1	chr5	-	1113	8	ISM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	56544	1821	56544	-1821	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGATCTGTCAGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	113990275	113982317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231
ENSMUSG00000004530.13_113982481_114003764_1	chr5	-	1101	9	ISM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	43055	1984	43055	-1984	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAACAATCTGCAGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	114003764	113982480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699
ENSMUSG00000004530.13_113983315_114020170_1	chr5	-	1169	9	ISM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	26649	2818	26649	-2818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAGAAGAACATCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	114020170	113983314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018
ENSMUSG00000004530.13_113984250_114046706_1	chr5	-	1056	9	ISM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	113	3753	113	-3753	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGAAAGTGCGAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	114046706	113984249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ENSMUSG00000004535.13_52690748_52719789_1	chr6	+	1476	10	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	34	23976	34	-23976	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAAGCAAATAAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	52690747	52719789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676
ENSMUSG00000004535.13_52704256_52723676_1	chr6	+	1331	10	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	13542	20089	13542	-20089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGATCATGTCTGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	52704255	52723676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654
ENSMUSG00000004535.13_52706300_52728100_1	chr6	+	1376	10	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	15586	15665	15586	-15665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACTTGCCAAAATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	52706299	52728100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069
ENSMUSG00000004535.13_52706356_52728155_1	chr6	+	1375	10	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	15642	15610	15642	-15610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAAACTTGAACTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	52706355	52728155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069
ENSMUSG00000004535.13_52710265_52734601_1	chr6	+	1363	11	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	19551	9164	19551	-9164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAAGGTGTCTCAACAC	NA	NA	NA	NA	NA	NA	NA	NA	52710264	52734601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538
ENSMUSG00000004535.13_52713832_52734713_1	chr6	+	1408	10	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	23118	9052	23118	-9052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTCAAGTATTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	52713831	52734713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538
ENSMUSG00000004535.13_52713934_52735247_1	chr6	+	1356	11	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	23220	8518	23220	-8518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGTCCCATCTTGGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	52713933	52735247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197
ENSMUSG00000004535.13_52716527_52742088_1	chr6	+	1393	10	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	25813	1677	25813	-1677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTTTTTCCTTTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	52716526	52742088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005
ENSMUSG00000004535.13_52716638_52742920_1	chr6	+	1345	11	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	25924	845	25924	-845	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATTTGAAGAACACGTTG	NA	NA	NA	NA	NA	NA	NA	NA	52716637	52742920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ENSMUSG00000004535.13_52719050_52743107_1	chr6	+	1341	10	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	28336	658	28336	-658	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGAGGCTAAGGAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	52719049	52743107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ENSMUSG00000004535.13_52719675_52743239_1	chr6	+	1364	9	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	28961	526	28961	-526	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATCTCTGTTAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	52719674	52743239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ENSMUSG00000004535.13_52723655_52743457_1	chr6	+	1300	7	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	32941	308	32941	-308	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATTGATCATAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	52723654	52743457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ENSMUSG00000004535.13_52723664_52743551_1	chr6	+	1385	7	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	32950	214	32950	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAGCTGCAAGAAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	52723663	52743551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ENSMUSG00000004535.13_52723737_52743583_1	chr6	+	1344	7	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	33023	182	33023	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAACCCTTTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	52723736	52743583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ENSMUSG00000004535.13_52728151_52743765_1	chr6	+	1426	6	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	37437	0	37437	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTTTGTAAATGATTCG	NA	NA	NA	NA	NA	NA	NA	NA	52728150	52743765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ENSMUSG00000004558.16_52142740_52143339_1	chr14	-	548	2	ISM	ENSMUSG00000004558.16	ENST00000554104.5	1816	14	4914	1	4914	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCATTGTTAATCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	52143339	52142739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52143167_52143218
ENSMUSG00000004558.16_52142740_52150815_1	chr14	-	2147	17	NNC	ENSMUSG00000004558.16	novel	2130	17	NA	NA	-25	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	5708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCATTGTTAATCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	52150815	52142739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_52143167_52143218_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52149885_52149950_52150617
ENSMUSG00000004558.16_52142740_52150815_2	chr14	-	2154	17	FSM	ENSMUSG00000004558.16	ENST00000553503.5	2130	17	-25	1	-25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCATTGTTAATCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	52150815	52142739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_52143167_52143218_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52149885_52149950_52150610
ENSMUSG00000004558.16_52143051_52143641_1	chr14	-	539	2	ISM	ENSMUSG00000004558.16	ENST00000554104.5	1816	14	4612	312	4612	182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTTAATGTGATAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	52143641	52143050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52143167_52143218
ENSMUSG00000004558.16_52143618_52146111_1	chr14	-	627	9	ISM	ENSMUSG00000004558.16	ENST00000554104.5	1816	14	2142	879	2142	-385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGAAGTCTCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	52146111	52143617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024
ENSMUSG00000004558.16_52143683_52150815_1	chr14	-	1030	15	FSM	ENSMUSG00000004558.16	ENSMUST00000111632.5	2103	15	130	943	-25	-450	multi-exon	FALSE	canonical	NA	NA	NA	NA	1448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGATCCCGCACCCTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	52150815	52143682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52150779
ENSMUSG00000004558.16_52145525_52148584_1	chr14	-	641	8	ISM	ENSMUSG00000004558.16	ENST00000397851.6	2007	17	2275	2785	-331	-2292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGGTTGTGTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	52148584	52145524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148542
ENSMUSG00000004558.16_52145831_52149003_1	chr14	-	574	8	ISM	ENSMUSG00000004558.16	ENST00000397851.6	2007	17	1856	3091	-750	-2598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTCCATTCCGGACATG	NA	NA	NA	NA	NA	NA	NA	NA	52149003	52145830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148542_52148585_52148922
ENSMUSG00000004558.16_52146025_52150815_1	chr14	-	597	8	ISM	ENSMUSG00000004558.16	ENST00000397851.6	2007	17	44	3285	-25	-2792	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCAGGGCTGTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	52150815	52146024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148542_52148585_52148922_52149004_52150779
ENSMUSG00000004591.17_142516060_142587472_1	chr3	-	2118	11	FSM	ENSMUSG00000004591.17	ENST00000316005.11	2489	11	295	76	-53	-76	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGTACATTGCAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	142587472	142516059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ENSMUSG00000004591.17_142516242_142587681_1	chr3	-	2140	11	NNC	ENSMUSG00000004591.17	novel	2489	11	NA	NA	84	-258	intron_retention	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTAACCAAATTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	142587681	142516241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527284_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ENSMUSG00000004610.5_43101898_43107088_1	chr7	+	502	5	ISM	ENSMUSG00000004610.5	ENSMUST00000004729.5	893	6	8391	136	8391	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	811	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCGCTCAGCAGGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	43101897	43107088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_43101924_43102222_43102382_43103941_43104005_43105902_43106062_43106993
ENSMUSG00000004610.5_43102314_43107115_1	chr7	+	412	4	ISM	ENSMUSG00000004610.5	ENSMUST00000004729.5	893	6	8807	109	8807	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCACAGAAGACCTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	43102313	43107115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_43102382_43103941_43104005_43105902_43106062_43106993
ENSMUSG00000004610.5_43103940_43107224_1	chr7	+	455	3	ISM	ENSMUSG00000004610.5	ENSMUST00000004729.5	893	6	10433	0	10433	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	899	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGATGTCCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	43103939	43107224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_43104005_43105902_43106062_43106993
ENSMUSG00000004626.15_3680955_3692788_1	chr8	+	2055	19	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCACCAGGGCTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	3680954	3692788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691894_3692056_3692645
ENSMUSG00000004626.15_3681153_3692788_1	chr8	+	1845	19	FSM	ENSMUSG00000004626.15	ENST00000414284.6	1836	19	-3	-6	-3	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCACCAGGGCTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	3681152	3692788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683856_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ENSMUSG00000004626.15_3682236_3692960_1	chr8	+	1961	18	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	1080	178	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCACTGGCTCTCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	3682235	3692960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691894_3692056_3692645
ENSMUSG00000004626.15_3683338_3684536_1	chr8	+	308	4	ISM	ENSMUSG00000004626.15	ENST00000441779.6	1878	19	2182	8246	2182	404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGGCGGCAGCTCGATG	NA	NA	NA	NA	NA	NA	NA	NA	3683337	3684536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_3683368_3683814_3683927_3684019_3684124_3684474
ENSMUSG00000004626.15_3684031_3693286_1	chr8	+	2004	14	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	2875	-358	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGATGCATCTCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	3684030	3693286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691894_3692056_3692645
ENSMUSG00000004626.15_3685614_3693646_1	chr8	+	2039	11	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	4458	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGGCTTCCTAGTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	3685613	3693646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691894_3692056_3692645
ENSMUSG00000004631.16_4674354_4747116_1	chr6	-	1625	10	FSM	ENSMUSG00000004631.16	ENST00000645725.1	1613	10	-2	-10	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGTGTGGTAAAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	4747116	4674353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_4674633_4678066_4678111_4689578_4689768_4691428_4691641_4694021_4694185_4707073_4707321_4711307_4711381_4717920_4718079_4719373_4719497_4746979
ENSMUSG00000004631.16_4674418_4747116_1	chr6	-	1390	9	FSM	ENSMUSG00000004631.16	ENST00000642394.1	1386	9	-10	6	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACATCAACGACTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	4747116	4674417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_4674633_4678066_4678111_4689578_4689768_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4746979
ENSMUSG00000004631.16_4674565_4689577_1	chr6	-	212	4	ISM	ENSMUSG00000004631.16	ENST00000644116.1	1547	11	57560	59	57518	13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCACCCCTTTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	4689577	4674564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_4674633_4677162_4677198_4678066_4678111_4689512
ENSMUSG00000004631.16_4674588_4694068_1	chr6	-	561	5	NNC	ENSMUSG00000004631.16	novel	1386	9	NA	NA	53027	-10	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATCAGCACTGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	4694068	4674587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_4674633_4678042_4678111_4689578_4689768_4691428_4691641_4694021
ENSMUSG00000004631.16_4674603_4694084_1	chr6	-	573	6	ISM	ENSMUSG00000004631.16	ENST00000428696.7	1346	11	53011	25	53011	-25	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAGCAATGAGTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	4694084	4674602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_4674633_4677162_4677198_4678066_4678111_4689578_4689768_4691428_4691641_4694021
ENSMUSG00000004631.16_4674608_4689642_1	chr6	-	234	4	ISM	ENSMUSG00000004631.16	ENST00000644116.1	1547	11	57495	102	57453	-30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGACAGAAGCAATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	4689642	4674607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_4674633_4677162_4677198_4678066_4678111_4689512
ENSMUSG00000004631.16_4689669_4707183_1	chr6	-	584	4	ISM	ENSMUSG00000004631.16	ENST00000428696.7	1346	11	39912	15091	39912	-15091	internal_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTTCCACCCTGTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	4707183	4689668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_4689768_4691428_4691641_4694021_4694185_4707073
ENSMUSG00000004631.16_4691428_4711382_1	chr6	-	629	4	ISM	ENSMUSG00000004631.16	ENST00000428696.7	1346	11	35713	16850	35713	-16850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTACTTTCAAACACTAA	NA	NA	NA	NA	NA	NA	NA	NA	4711382	4691427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_4691641_4694021_4694185_4707073_4707252_4711307
ENSMUSG00000004631.16_4691600_4718079_1	chr6	-	614	5	ISM	ENSMUSG00000004631.16	ENST00000428696.7	1346	11	29016	17022	29016	-17022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGGCGAGGGCATTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	4718079	4691599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_4691641_4694021_4694185_4707073_4707252_4711307_4711381_4717920
ENSMUSG00000004631.16_4694093_4719470_1	chr6	-	598	5	ISM	ENSMUSG00000004631.16	ENST00000428696.7	1346	11	27625	19515	27625	-19515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCCTGTGATAACATGC	NA	NA	NA	NA	NA	NA	NA	NA	4719470	4694092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_4694185_4707073_4707252_4711307_4711381_4717920_4718079_4719373
ENSMUSG00000004631.16_4694163_4747063_1	chr6	-	638	6	ISM	ENSMUSG00000004631.16	ENST00000428696.7	1346	11	32	19585	32	-19585	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGCATTTTCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	4747063	4694162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_4694185_4707073_4707252_4711307_4711381_4717920_4718079_4719373_4719497_4746979
ENSMUSG00000004633.18_54016748_54195600_1	chr6	+	612	5	ISM	ENSMUSG00000004633.18	ENSMUST00000046856.14	2418	13	190	82106	190	-81629	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTACACGCTGGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	54016747	54195600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_54017141_54150448_54150488_54171010_54171067_54192646_54192679_54195508
ENSMUSG00000004633.18_54017024_54197687_1	chr6	+	644	6	ISM	ENSMUSG00000004633.18	ENSMUST00000046856.14	2418	13	466	80019	466	-79542	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCCCAGGGCACGG	NA	NA	NA	NA	NA	NA	NA	NA	54017023	54197687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_54017141_54150448_54150488_54171010_54171067_54192646_54192679_54195508_54195623_54197401
ENSMUSG00000004633.18_54171011_54263163_1	chr6	+	651	6	ISM	ENSMUSG00000004633.18	ENSMUST00000046856.14	2418	13	154453	14543	-70832	-14066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACACTAAACTTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	54171010	54263163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_54171067_54192646_54192679_54195508_54195623_54197401_54197688_54250060_54250139_54263078
ENSMUSG00000004633.18_54195562_54267346_1	chr6	+	605	5	ISM	ENSMUSG00000004633.18	ENSMUST00000046856.14	2418	13	179004	10360	-46281	-9883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACCACGCTTGTCAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	54195561	54267346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_54195623_54197401_54197688_54250060_54250139_54263078_54263164_54267251
ENSMUSG00000004633.18_54197625_54272906_1	chr6	+	616	6	ISM	ENSMUSG00000004633.18	ENSMUST00000046856.14	2418	13	181067	4800	-44218	-4323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTACAGAGAACCATAG	NA	NA	NA	NA	NA	NA	NA	NA	54197624	54272906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_54197688_54250060_54250139_54263078_54263164_54267251_54267426_54270022_54270101_54272768
ENSMUSG00000004642.14_33797399_33802981_1	chr5	-	1244	4	ISM	ENSMUSG00000004642.14	ENSMUST00000101354.10	1578	7	6669	0	6663	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCCTATACTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	33802981	33797398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843
ENSMUSG00000004642.14_33797399_33803413_1	chr5	-	1304	5	ISM	ENSMUSG00000004642.14	ENSMUST00000057551.14	1906	8	6505	0	6231	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCCTATACTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	33803413	33797398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353
ENSMUSG00000004642.14_33797572_33807153_1	chr5	-	1198	6	ISM	ENSMUSG00000004642.14	ENSMUST00000057551.14	1906	8	2765	173	2491	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTTGTTTTTTTAATGA	NA	NA	NA	NA	NA	NA	NA	NA	33807153	33797571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086
ENSMUSG00000004642.14_33797730_33809640_1	chr5	-	1297	8	FSM	ENSMUSG00000004642.14	ENSMUST00000057551.14	1906	8	278	331	4	-331	multi-exon	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACAGAGCTCTGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	33809640	33797729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
ENSMUSG00000004642.14_33797997_33809791_1	chr5	-	1181	8	FSM	ENSMUSG00000004642.14	ENSMUST00000057551.14	1906	8	127	598	-102	-598	multi-exon	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTTTTAAGTTGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	33809791	33797996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
ENSMUSG00000004642.14_33798006_33809918_1	chr5	-	1299	8	FSM	ENSMUSG00000004642.14	ENSMUST00000057551.14	1906	8	0	607	0	-607	multi-exon	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTTAGGCATGTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	33809918	33798005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
ENSMUSG00000004655.6_55313417_55325265_1	chr6	+	2352	4	FSM	ENSMUSG00000004655.6	ENSMUST00000004774.4	2627	4	0	275	0	-275	multi-exon	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCAAGGCCATGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	55313416	55325265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_55313860_55322390_55322556_55322797_55322879_55323602
ENSMUSG00000004655.6_55313704_55325540_1	chr6	+	2340	4	FSM	ENSMUSG00000004655.6	ENSMUST00000004774.4	2627	4	287	0	287	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGGCCTCCTGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	55313703	55325540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_55313860_55322390_55322556_55322797_55322879_55323602
ENSMUSG00000004665.11_79824418_79829279_1	chr10	+	619	6	ISM	ENSMUSG00000004665.11	ENSMUST00000004784.11	2460	7	0	2617	0	-1050	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCCAGTCTGGCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	79824417	79829279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79824575_79827193_79827316_79828106_79828174_79828276_79828415_79829047_79829165_79829261
ENSMUSG00000004665.11_79824457_79829304_1	chr10	+	605	6	ISM	ENSMUSG00000004665.11	ENSMUST00000004784.11	2460	7	39	2592	0	-1025	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTACCAGGAGACATCTC	NA	NA	NA	NA	NA	NA	NA	NA	79824456	79829304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79824575_79827193_79827316_79828106_79828174_79828276_79828415_79829047_79829165_79829261
ENSMUSG00000004665.11_79824457_79829308_1	chr10	+	609	6	ISM	ENSMUSG00000004665.11	ENSMUST00000004784.11	2460	7	39	2588	0	-1021	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGGAGACATCTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	79824456	79829308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79824575_79827193_79827316_79828106_79828174_79828276_79828415_79829047_79829165_79829261
ENSMUSG00000004665.11_79824457_79829384_1	chr10	+	724	6	ISM	ENSMUSG00000004665.11	ENST00000562958.6	1035	7	-47	1134	0	-945	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACCAACAAGTGTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	79824456	79829384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79824575_79827193_79827316_79828106_79828174_79828276_79828426_79829019_79829165_79829261
ENSMUSG00000004665.11_79827193_79829413_1	chr10	+	559	5	ISM	ENSMUSG00000004665.11	ENST00000529222.1	699	6	0	916	0	-916	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCCCCGGCGCCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	79827192	79829413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79827316_79828106_79828174_79828314_79828415_79829047_79829165_79829261
ENSMUSG00000004665.11_79827193_79830270_1	chr10	+	717	6	ISM	ENSMUSG00000004665.11	ENST00000562958.6	1035	7	2689	248	0	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGGGCTACACGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	79827192	79830270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79827316_79828106_79828174_79828276_79828426_79829019_79829165_79829261_79829409_79830184
ENSMUSG00000004665.11_79827281_79830230_1	chr10	+	550	6	ISM	ENSMUSG00000004665.11	ENSMUST00000004784.11	2460	7	2863	1666	88	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGGCACCGACAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	79827280	79830230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79827316_79828106_79828174_79828276_79828415_79829047_79829165_79829261_79829409_79830184
ENSMUSG00000004665.11_79827284_79830216_1	chr10	+	495	6	FSM	ENSMUSG00000004665.11	ENST00000529222.1	699	6	91	113	91	-113	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTATGACACCAAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	79827283	79830216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79827316_79828106_79828174_79828314_79828415_79829047_79829165_79829261_79829409_79830184
ENSMUSG00000004665.11_79828362_79830404_1	chr10	+	537	4	ISM	ENSMUSG00000004665.11	ENST00000529222.1	699	6	1169	-75	1169	75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGAGTACCTGGCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	79828361	79830404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79828415_79829047_79829165_79829261_79829409_79830184
ENSMUSG00000004665.11_79829046_79830518_1	chr10	+	600	3	ISM	ENSMUSG00000004665.11	ENST00000529222.1	699	6	1853	-189	1853	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGGAAACTGGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	79829045	79830518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79829165_79829261_79829409_79830184
ENSMUSG00000004665.11_79829331_79830641_1	chr10	+	533	2	NNC	ENSMUSG00000004665.11	novel	926	6	NA	NA	2138	123	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	865	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGCCTCGCTTCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	79829330	79830641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_79829409_79830186
ENSMUSG00000004667.19_79871783_79875629_1	chr10	-	1143	7	NNC	ENSMUSG00000004667.19	novel	1148	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	79875629	79871782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873214_79874272_79874448_79875416
ENSMUSG00000004698.12_34422213_34439462_1	chr12	-	2144	2	ISM	ENSMUSG00000004698.12	ENST00000524023.1	2054	9	47916	-1167	47844	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCTAAAGATACATTATC	NA	NA	NA	NA	NA	NA	NA	NA	34439462	34422212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_34424138_34439243
ENSMUSG00000004698.12_34422213_34483223_1	chr12	-	3263	9	ISM	ENSMUSG00000004698.12	ENST00000681273.1	3830	12	95639	0	4083	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCTAAAGATACATTATC	NA	NA	NA	NA	NA	NA	NA	NA	34483223	34422212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_34424283_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34457764_34457897_34479496_34479619_34481861_34481989_34483079
ENSMUSG00000004698.12_34422336_34487198_1	chr12	-	3201	10	ISM	ENSMUSG00000004698.12	ENST00000681273.1	3830	12	91664	123	108	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTATCCTGTTTCAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	34487198	34422335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_34424283_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34457764_34457897_34479496_34479619_34481861_34481989_34483079_34483222_34487135
ENSMUSG00000004698.12_34422386_34487306_1	chr12	-	3259	10	ISM	ENSMUSG00000004698.12	ENST00000681273.1	3830	12	91556	173	0	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTCTATTAAAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	34487306	34422385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_34424283_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34457764_34457897_34479496_34479619_34481861_34481989_34483079_34483222_34487135
ENSMUSG00000004698.12_34422398_34440222_1	chr12	-	2040	3	ISM	ENSMUSG00000004698.12	ENST00000524023.1	2054	9	47156	-982	47084	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGAGTCTTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	34440222	34422397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_34424138_34439243_34439462_34440140
ENSMUSG00000004698.12_34422445_34440276_1	chr12	-	2047	3	ISM	ENSMUSG00000004698.12	ENST00000524023.1	2054	9	47102	-935	47030	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTCTAAAGACACATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	34440276	34422444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_34424138_34439243_34439462_34440140
ENSMUSG00000004698.12_34422508_34440322_1	chr12	-	2030	3	ISM	ENSMUSG00000004698.12	ENST00000524023.1	2054	9	47056	-872	46984	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTTTGGTCTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	34440322	34422507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_34424138_34439243_34439462_34440140
ENSMUSG00000004698.12_34422639_34578724_1	chr12	-	3266	12	FSM	ENSMUSG00000004698.12	ENST00000681273.1	3830	12	138	426	138	-426	multi-exon	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCAAAGATAGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	34578724	34422638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_34424283_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34457764_34457897_34479496_34479619_34481861_34481989_34483079_34483222_34487135_34487378_34578281_34578345_34578598
ENSMUSG00000004698.12_34422714_34578761_1	chr12	-	3228	12	FSM	ENSMUSG00000004698.12	ENST00000681273.1	3830	12	101	501	101	-501	multi-exon	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGGCAGGACAGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	34578761	34422713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_34424283_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34457764_34457897_34479496_34479619_34481861_34481989_34483079_34483222_34487135_34487378_34578281_34578345_34578598
ENSMUSG00000004698.12_34422774_34578873_1	chr12	-	3280	12	FSM	ENSMUSG00000004698.12	ENST00000681273.1	3830	12	-11	561	0	-561	multi-exon	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAATGATTCTCTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	34578873	34422773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_34424283_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34457764_34457897_34479496_34479619_34481861_34481989_34483079_34483222_34487135_34487378_34578281_34578345_34578598
ENSMUSG00000004698.12_34422899_34481917_1	chr12	-	2085	7	ISM	ENSMUSG00000004698.12	ENSMUST00000209667.2	1635	10	96386	-927	5389	481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCTGGCAAATACAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	34481917	34422898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_34424138_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34479496_34479619_34481861
ENSMUSG00000004698.12_34423054_34483130_1	chr12	-	2052	8	ISM	ENSMUSG00000004698.12	ENSMUST00000209667.2	1635	10	95173	-772	4176	326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCAGATGCTGCGATGT	NA	NA	NA	NA	NA	NA	NA	NA	34483130	34423053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_34424138_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34479496_34479619_34481861_34481989_34483079
ENSMUSG00000004698.12_34423434_34578347_1	chr12	-	2080	10	FSM	ENSMUSG00000004698.12	ENSMUST00000239340.2	4110	10	92	1938	-20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTTTTCATATGACTG	NA	NA	NA	NA	NA	NA	NA	NA	34578347	34423433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_34424138_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34479496_34479619_34481861_34481989_34483079_34483231_34487135_34487378_34578281
ENSMUSG00000004698.12_34423537_34481988_1	chr12	-	1512	7	ISM	ENSMUSG00000004698.12	ENST00000524023.1	2054	9	5390	157	5318	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGTTTTATCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	34481988	34423536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_34424138_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34479496_34479619_34481867
ENSMUSG00000004698.12_34423537_34578347_1	chr12	-	1977	10	FSM	ENSMUSG00000004698.12	ENSMUST00000239340.2	4110	10	92	2041	-20	-103	multi-exon	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGTTTTATCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	34578347	34423536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_34424138_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34479496_34479619_34481861_34481989_34483079_34483231_34487135_34487378_34578281
ENSMUSG00000004698.12_34423712_34483223_1	chr12	-	1481	8	ISM	ENSMUSG00000004698.12	ENST00000524023.1	2054	9	4155	332	4083	114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATCACTCTATACTGAT	NA	NA	NA	NA	NA	NA	NA	NA	34483223	34423711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_34424138_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34479496_34479619_34481867_34481989_34483079
ENSMUSG00000004698.12_34423712_34578873_1	chr12	-	2074	11	FSM	ENSMUSG00000004698.12	ENST00000622668.4	4293	11	9	2210	0	114	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATCACTCTATACTGAT	NA	NA	NA	NA	NA	NA	NA	NA	34578873	34423711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_34424138_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34479496_34479619_34481861_34481989_34483079_34483231_34487135_34487378_34578281_34578345_34578598
ENSMUSG00000004698.12_34423826_34487306_1	chr12	-	1536	9	FSM	ENSMUSG00000004698.12	ENST00000524023.1	2054	9	72	446	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAGATAGGTGGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	34487306	34423825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_34424138_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34479496_34479619_34481867_34481989_34483079_34483222_34487135
ENSMUSG00000004748.6_4041480_4045315_1	chr11	-	1281	4	FSM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	130	0	-25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTTCATTTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	4045315	4041479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_4042300_4043800_4044034_4044388_4044517_4045215
ENSMUSG00000004748.6_4041649_4045445_1	chr11	-	1242	4	FSM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	0	169	0	-169	multi-exon	FALSE	canonical	NA	NA	NA	NA	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAGTGTGGCTGAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	4045445	4041648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_4042300_4043800_4044034_4044388_4044517_4045215
ENSMUSG00000004748.6_4041696_4045445_1	chr11	-	1195	4	FSM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	0	216	0	-216	multi-exon	FALSE	canonical	NA	NA	NA	NA	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTGACAAGTGAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	4045445	4041695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_4042300_4043800_4044034_4044388_4044517_4045215
ENSMUSG00000004748.6_4043798_4044446_1	chr11	-	225	2	ISM	ENSMUSG00000004748.6	ENST00000407550.3	369	3	844	-1	844	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCTTTCTGGTCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	4044446	4043797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_4043965_4044388
ENSMUSG00000004748.6_4043899_4045240_1	chr11	-	219	3	FSM	ENSMUSG00000004748.6	ENST00000407550.3	369	3	50	100	50	-100	multi-exon	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTACTATGACCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	4045240	4043898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_4043965_4044388_4044517_4045215
ENSMUSG00000004768.15_33758991_33781645_2	chr1	+	4301	8	NNC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTGTGTGTGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	33758990	33781645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775958_33777368_33777462_33778333
ENSMUSG00000004768.15_33759219_33781645_1	chr1	+	4079	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	243	0	243	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTGTGTGTGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	33759218	33781645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ENSMUSG00000004771.13_64623785_64644905_1	chr9	-	607	3	FSM	ENSMUSG00000004771.13	ENSMUST00000167569.8	726	3	119	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTAGAAATAAGCTATTG	NA	NA	NA	NA	NA	NA	NA	NA	64644905	64623784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_64624271_64632783_64632865_64644865
ENSMUSG00000004771.13_64623988_64633992_1	chr9	-	451	3	ISM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	11048	1407	10913	-203	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTTATAAAATCCTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	64633992	64623987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64624271_64632783_64632865_64633905
ENSMUSG00000004771.13_64624185_64635535_1	chr9	-	381	4	ISM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	9505	1604	9370	40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCGCCCACCACTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	64635535	64624184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515
ENSMUSG00000004771.13_64624225_64635577_1	chr9	-	383	4	ISM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	9463	1644	9328	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGACATGTCTCCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	64635577	64624224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515
ENSMUSG00000004788.12_85266320_85273404_1	chr12	+	1533	8	NNC	ENSMUSG00000004788.12	novel	1605	8	NA	NA	65	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2035	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAAAGGGCCCCAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	85266319	85273404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_85266499_85266595_85266708_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
ENSMUSG00000004788.12_85266356_85273404_1	chr12	+	1506	8	FSM	ENSMUSG00000004788.12	ENSMUST00000004910.12	1605	8	101	-2	101	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAAAGGGCCCCAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	85266355	85273404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
ENSMUSG00000004788.12_85266356_85273404_2	chr12	+	1498	8	NNC	ENSMUSG00000004788.12	novel	1605	8	NA	NA	101	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAAAGGGCCCCAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	85266355	85273404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271336_85271396_85272776
ENSMUSG00000004789.11_85157607_85168913_1	chr12	+	662	8	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	0	11949	0	-11949	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACCCTGTAACAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	85157606	85168913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760
ENSMUSG00000004789.11_85158270_85169630_1	chr12	+	614	8	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	663	11232	663	-11232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCCTCCGACAACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	85158269	85169630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553
ENSMUSG00000004789.11_85162046_85170645_1	chr12	+	677	8	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	4439	10217	4439	-10217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGATCTCTAGTCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	85162045	85170645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547
ENSMUSG00000004789.11_85165301_85175111_1	chr12	+	598	7	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	7694	5751	7694	-5751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGATGCTTTCCTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	85165300	85175111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084
ENSMUSG00000004789.11_85165301_85175215_1	chr12	+	702	7	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	7694	5647	7694	-5647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTCCTGAGGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	85165300	85175215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084
ENSMUSG00000004789.11_85166005_85176639_1	chr12	+	647	6	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	8398	4223	8398	-4223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGTTGGGCAAGACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	85166004	85176639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565
ENSMUSG00000004789.11_85168791_85177692_1	chr12	+	609	7	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	11184	3170	11184	-3170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGATATGGATGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	85168790	85177692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670
ENSMUSG00000004789.11_85168836_85177750_1	chr12	+	622	7	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	11229	3112	11229	-3112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGAACACCCATTATCA	NA	NA	NA	NA	NA	NA	NA	NA	85168835	85177750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670
ENSMUSG00000004789.11_85168897_85177797_1	chr12	+	608	7	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	11290	3065	11290	-3065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACGCCATCTTTGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	85168896	85177797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670
ENSMUSG00000004789.11_85169551_85179438_1	chr12	+	681	7	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	11944	1424	11944	-1424	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGATTGATGGCAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	85169550	85179438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ENSMUSG00000004789.11_85175125_85179589_1	chr12	+	614	5	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	17518	1273	17518	-1273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCATCAATCCCAGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	85175124	85179589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ENSMUSG00000004789.11_85176588_85179711_1	chr12	+	623	4	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	18981	1151	18981	-1151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTCTCCCTGAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	85176587	85179711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85176640_85177233_85177318_85177670_85177839_85179392
ENSMUSG00000004789.11_85177215_85179815_1	chr12	+	694	3	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	19608	1047	19608	-1047	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGGCAATTTTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	85177214	85179815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85177318_85177670_85177839_85179392
ENSMUSG00000004789.11_85177805_85179955_1	chr12	+	597	2	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	20198	907	20198	-907	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGACTTGATGCCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	85177804	85179955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85177839_85179392
ENSMUSG00000004791.8_85213409_85224564_2	chr12	-	2073	7	NNC	ENSMUSG00000004791.8	novel	2080	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGGATGTATGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	85224564	85213408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_85214189_85216131_85216192_85216284_85216315_85218148_85218229_85218433_85218631_85222536_85222570_85223671
ENSMUSG00000004791.8_85214039_85224070_1	chr12	-	956	7	FSM	ENSMUSG00000004791.8	ENSMUST00000004913.7	1582	7	0	626	0	-626	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAAGATAAGGGGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	85224070	85214038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_85214189_85216131_85216192_85216284_85216315_85218148_85218229_85218433_85218631_85222529_85222570_85223671
ENSMUSG00000004837.3_61544091_61562684_1	chr11	+	567	4	FSM	ENSMUSG00000004837.3	ENST00000573099.5	540	4	-27	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACACAAGACCAGAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	61544090	61562684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_61544251_61551047_61551146_61555010_61555134_61562498
ENSMUSG00000004842.19_65317547_65326835_1	chr16	+	402	3	ISM	ENSMUSG00000004842.19	ENST00000560656.1	647	4	32	4029	32	-4029	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGGTATGCCTTTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	65317546	65326835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_65317657_65320448_65320521_65326615
ENSMUSG00000004842.19_65320445_65330725_1	chr16	+	370	3	ISM	ENSMUSG00000004842.19	ENST00000560656.1	647	4	2930	139	282	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGATGGCTGAAGAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	65320444	65330725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_65320521_65326615_65326841_65330656
ENSMUSG00000004843.8_65336698_65342227_1	chr16	-	611	3	ISM	ENSMUSG00000004843.8	ENST00000471660.5	1467	5	17413	343	17179	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAGGCGTCAACGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	65342227	65336697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_65337137_65337305_65337413_65342162
ENSMUSG00000004843.8_65336804_65343797_1	chr16	-	606	4	ISM	ENSMUSG00000004843.8	ENST00000471660.5	1467	5	15843	449	15609	-449	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGTTCTTTTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	65343797	65336803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734
ENSMUSG00000004843.8_65336847_65343857_1	chr16	-	623	4	ISM	ENSMUSG00000004843.8	ENST00000471660.5	1467	5	15783	492	15549	-492	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGCTCTTAGGTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	65343857	65336846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734
ENSMUSG00000004843.8_65336952_65359430_1	chr16	-	660	5	FSM	ENSMUSG00000004843.8	ENST00000471660.5	1467	5	210	597	-24	-597	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTTGCAAAAATGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	65359430	65336951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65359360
ENSMUSG00000004843.8_65337010_65359473_1	chr16	-	645	5	FSM	ENSMUSG00000004843.8	ENST00000471660.5	1467	5	167	655	-67	-655	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTCTCACTTGAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	65359473	65337009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65359360
ENSMUSG00000004843.8_65337079_65359506_1	chr16	-	609	5	FSM	ENSMUSG00000004843.8	ENST00000471660.5	1467	5	134	724	-100	-724	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTTCTGATGAAGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	65359506	65337078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65359360
ENSMUSG00000004843.8_65337306_65359612_1	chr16	-	657	4	ISM	ENSMUSG00000004843.8	ENST00000471660.5	1467	5	28	951	0	-951	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAATGGCTTCTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	65359612	65337305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_65337413_65342162_65342266_65343734_65343930_65359360
ENSMUSG00000004843.8_65343741_65347875_1	chr16	-	216	2	ISM	ENSMUSG00000004843.8	ENSMUST00000231259.2	1722	7	11531	7727	11531	-7386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGGTAACTGGGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	65347875	65343740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_65343930_65347848
ENSMUSG00000004843.8_65343875_65359408_1	chr16	-	195	3	ISM	ENSMUSG00000004843.8	ENSMUST00000004965.8	1872	6	204	7861	-2	-7520	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTAAGCAGCTTGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	65359408	65343874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_65343930_65347848_65347941_65359360
ENSMUSG00000004843.8_65343908_65359484_1	chr16	-	238	3	ISM	ENSMUSG00000004843.8	ENSMUST00000004965.8	1872	6	128	7894	-78	-7553	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGATTGGTAATAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	65359484	65343907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_65343930_65347848_65347941_65359360
ENSMUSG00000004846.11_137015873_137019316_1	chr5	+	1726	10	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	0	6186	0	-6186	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGACCATTTTTCAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	137015872	137019316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271
ENSMUSG00000004846.11_137016023_137019364_1	chr5	+	1624	10	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	150	6138	150	-6138	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGCAGGGGAGGCCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	137016022	137019364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271
ENSMUSG00000004846.11_137016108_137019393_1	chr5	+	1568	10	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	235	6109	235	-6109	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGAGTCTGCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	137016107	137019393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271
ENSMUSG00000004846.11_137016330_137020201_1	chr5	+	1625	13	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	457	5301	457	-5301	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACCCTGAGGACTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	137016329	137020201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153
ENSMUSG00000004846.11_137016330_137020262_1	chr5	+	1686	13	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	457	5240	457	-5240	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGGCTTTCTGCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	137016329	137020262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153
ENSMUSG00000004846.11_137016450_137020414_1	chr5	+	1616	14	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	577	5088	577	-5088	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAACCAGCACGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	137016449	137020414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397
ENSMUSG00000004846.11_137016968_137022167_1	chr5	+	1682	15	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	1095	3335	1095	-3335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGACAGAGGGCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	137016967	137022167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062
ENSMUSG00000004846.11_137017188_137023033_1	chr5	+	1625	15	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	1315	2469	1315	-2469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTTGATATCCACATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	137017187	137023033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996
ENSMUSG00000004846.11_137017459_137023816_1	chr5	+	1594	15	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	1586	1686	1586	-1686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGGCCAGATGAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	137017458	137023816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786
ENSMUSG00000004846.11_137017505_137023880_1	chr5	+	1612	15	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	1632	1622	1632	-1622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCCCTCAACCACAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	137017504	137023880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786
ENSMUSG00000004846.11_137017779_137025038_1	chr5	+	1596	15	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	1906	464	1906	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCACACACTACCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	137017778	137025038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ENSMUSG00000004846.11_137017836_137025094_1	chr5	+	1595	15	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	1963	408	1963	-408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTTTGTTGACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	137017835	137025094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ENSMUSG00000004846.11_137018764_137025319_1	chr5	+	1631	12	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	2891	183	2891	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCTGAGGGTCCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	137018763	137025319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ENSMUSG00000004846.11_137018836_137025353_1	chr5	+	1593	12	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	2963	149	2963	-149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTCAGCCTCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	137018835	137025353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ENSMUSG00000004846.11_137019040_137025502_1	chr5	+	1690	11	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	3167	0	3167	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTGTGAGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	137019039	137025502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ENSMUSG00000004846.11_137019066_137025502_1	chr5	+	1664	11	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	3193	0	3193	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTGTGAGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	137019065	137025502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ENSMUSG00000004846.11_137019091_137025502_1	chr5	+	1639	11	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	3218	0	3218	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTGTGAGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	137019090	137025502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ENSMUSG00000004849.15_137064475_137072039_1	chr5	-	540	4	ISM	ENSMUSG00000004849.15	ENSMUST00000111080.8	1353	5	2950	628	2950	-628	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACCTTACCTACTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	137072039	137064474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917
ENSMUSG00000004849.15_137064608_137074896_1	chr5	-	499	5	FSM	ENSMUSG00000004849.15	ENSMUST00000111080.8	1353	5	93	761	93	-761	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCATAGCCCCGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	137074896	137064607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137074861
ENSMUSG00000004865.17_28808180_28810200_1	chr17	-	1062	2	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	31483	1558	31225	-1558	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGAGTCTGGTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	28810200	28808179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28809216_28810174
ENSMUSG00000004865.17_28808379_28813165_1	chr17	-	1022	4	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	28518	1757	28260	-1757	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTGTTTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	28813165	28808378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143
ENSMUSG00000004865.17_28808448_28813225_1	chr17	-	1013	4	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	28458	1826	28200	-1826	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCACAACTAAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	28813225	28808447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143
ENSMUSG00000004865.17_28808564_28818521_1	chr17	-	1101	6	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	23162	1942	22904	-1942	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	28818521	28808563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444
ENSMUSG00000004865.17_28808692_28818618_1	chr17	-	1070	6	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	23065	2070	22807	-2070	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGTCACACTTTCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	28818618	28808691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444
ENSMUSG00000004865.17_28808848_28818752_1	chr17	-	1048	6	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	22931	2226	22673	-2226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTAGGTGAATTTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	28818752	28808847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444
ENSMUSG00000004865.17_28809051_28819289_1	chr17	-	1009	7	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	22394	2429	22136	-2429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTGGCTAAACTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	28819289	28809050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216
ENSMUSG00000004865.17_28809104_28819348_1	chr17	-	1015	7	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	22335	2482	22077	-2482	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGAGCTTATGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	28819348	28809103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216
ENSMUSG00000004865.17_28809155_28819399_1	chr17	-	1015	7	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	22284	2533	22026	-2533	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGTGGCCTCAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	28819399	28809154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216
ENSMUSG00000004865.17_28810208_28821693_1	chr17	-	1010	8	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	19990	3586	19732	-3586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATACTCCAAGGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	28821693	28810207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661
ENSMUSG00000004865.17_28811192_28821827_1	chr17	-	1084	7	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	19856	4570	19598	-4570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCCGTTTGCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	28821827	28811191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661
ENSMUSG00000004865.17_28817876_28824360_1	chr17	-	1101	7	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	17323	11254	17065	1802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCACTCACTCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	28824360	28817875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272
ENSMUSG00000004865.17_28818444_28825368_1	chr17	-	1089	7	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	16315	11822	16057	1234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACAGCGGCCCCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	28825368	28818443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280
ENSMUSG00000004865.17_28818609_28827657_1	chr17	-	1071	9	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	14026	11987	13768	1069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACACAGACTCTTGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	28827657	28818608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619
ENSMUSG00000004865.17_28818808_28841011_1	chr17	-	1014	10	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	672	12186	414	870	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGCGTGGTGGAGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	28841011	28818807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950
ENSMUSG00000004865.17_28819310_28841425_1	chr17	-	937	10	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	258	12688	0	368	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGACCTAACAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	28841425	28819309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ENSMUSG00000004865.17_28821662_28841683_1	chr17	-	1048	8	FSM	ENSMUSG00000004865.17	ENSMUST00000232751.2	1002	8	-258	212	0	-212	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACATGGGGTGCTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	28841683	28821661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ENSMUSG00000004872.16_78079418_78173541_1	chr1	-	1630	9	FSM	ENSMUSG00000004872.16	ENSMUST00000004994.16	3078	9	-66	1514	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCCGGCCTCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	78173541	78079417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_78079473_78079964_78080212_78098214_78098430_78099227_78099394_78108864_78109071_78169078_78169214_78170376_78170507_78171887_78172124_78173301
ENSMUSG00000004872.16_78079445_78099274_1	chr1	-	290	3	ISM	ENSMUSG00000004872.16	ENST00000336840.11	1245	8	74156	0	74156	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATAAGTGAACTGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	78099274	78079444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_78079473_78098214_78098430_78099227
ENSMUSG00000004872.16_78098277_78108883_1	chr1	-	338	3	ISM	ENSMUSG00000004872.16	ENST00000336840.11	1245	8	64547	18832	64547	-18832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCATCGGGGCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	78108883	78098276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_78098430_78099227_78099394_78108864
ENSMUSG00000004880.12_181642900_181669944_1	chr1	-	3505	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGTTAGAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	181669944	181642899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659295_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ENSMUSG00000004891.17_87878385_87882182_1	chr3	+	1110	3	ISM	ENSMUSG00000004891.17	ENSMUST00000090973.12	6126	4	-15	5576	-15	-5576	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGGCGGAGCCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	87878384	87882182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87879296_87880298_87880424_87882108
ENSMUSG00000004891.17_87878778_87883022_1	chr3	+	1012	4	FSM	ENSMUSG00000004891.17	ENSMUST00000090973.12	6126	4	378	4736	342	-4736	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAGGCCACAGTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	87878777	87883022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_87879296_87880298_87880424_87882108_87882183_87882727
ENSMUSG00000004891.17_87878832_87883076_1	chr3	+	1012	4	FSM	ENSMUSG00000004891.17	ENSMUST00000090973.12	6126	4	432	4682	396	-4682	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGCGAGCAGCCGGACC	NA	NA	NA	NA	NA	NA	NA	NA	87878831	87883076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_87879296_87880298_87880424_87882108_87882183_87882727
ENSMUSG00000004891.17_87879156_87883438_1	chr3	+	1050	4	FSM	ENSMUSG00000004891.17	ENSMUST00000090973.12	6126	4	756	4320	720	-4320	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAGAGAACTCGGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	87879155	87883438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_87879296_87880298_87880424_87882108_87882183_87882727
ENSMUSG00000004891.17_87880328_87883589_1	chr3	+	1032	3	ISM	ENSMUSG00000004891.17	ENSMUST00000160694.2	5958	5	1892	4169	1892	-4169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGATCAAGAATTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	87880327	87883589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87880424_87882108_87882183_87882727
ENSMUSG00000004891.17_87880394_87883628_1	chr3	+	1005	3	ISM	ENSMUSG00000004891.17	ENSMUST00000160694.2	5958	5	1958	4130	1958	-4130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTTCATTTCTAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	87880393	87883628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87880424_87882108_87882183_87882727
ENSMUSG00000004891.17_87882752_87884283_1	chr3	+	1400	2	ISM	ENSMUSG00000004891.17	ENSMUST00000160694.2	5958	5	4316	3475	4316	-3475	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTGTACTGCTAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	87882751	87884283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87883888_87884019
ENSMUSG00000004891.17_87883607_87885136_1	chr3	+	1398	2	ISM	ENSMUSG00000004891.17	ENSMUST00000160694.2	5958	5	5171	2622	5171	-2622	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATTGTGGTCTACGGAA	NA	NA	NA	NA	NA	NA	NA	NA	87883606	87885136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87883888_87884019
ENSMUSG00000004891.17_87883789_87885310_1	chr3	+	1390	2	ISM	ENSMUSG00000004891.17	ENSMUST00000160694.2	5958	5	5353	2448	5353	-2448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGTGGAGGACAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	87883788	87885310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87883888_87884019
ENSMUSG00000004897.17_87813874_87822630_1	chr3	+	1086	7	FSM	ENSMUSG00000004897.17	ENST00000537739.5	1996	7	108	802	108	-802	multi-exon	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTATTTTCCCATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	87813873	87822630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208_87822453_87822556
ENSMUSG00000004897.17_87813926_87822689_1	chr3	+	1093	7	FSM	ENSMUSG00000004897.17	ENST00000537739.5	1996	7	160	743	160	-743	multi-exon	FALSE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCATCCATAAATCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	87813925	87822689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208_87822453_87822556
ENSMUSG00000004897.17_87813971_87822746_1	chr3	+	1105	7	FSM	ENSMUSG00000004897.17	ENST00000537739.5	1996	7	205	686	205	-686	multi-exon	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGGAATTGTAGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	87813970	87822746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208_87822453_87822556
ENSMUSG00000004897.17_87820653_87822890_1	chr3	+	1088	5	ISM	ENSMUSG00000004897.17	ENST00000537739.5	1996	7	6887	542	6887	-542	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACCTGCTGCCTTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	87820652	87822890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87820759_87821358_87821545_87821779_87821998_87822208_87822453_87822556
ENSMUSG00000004897.17_87820706_87822940_1	chr3	+	1085	5	ISM	ENSMUSG00000004897.17	ENST00000537739.5	1996	7	6940	492	6940	-492	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATATTTCACCCAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	87820705	87822940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87820759_87821358_87821545_87821779_87821998_87822208_87822453_87822556
ENSMUSG00000004897.17_87821428_87822737_1	chr3	+	864	3	ISM	ENSMUSG00000004897.17	ENST00000537739.5	1996	7	7662	695	7662	-695	intron_retention	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAGGGTTCAAGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	87821427	87822737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87821545_87821779_87821998_87822208
ENSMUSG00000004897.17_87821448_87823072_1	chr3	+	1075	4	ISM	ENSMUSG00000004897.17	ENST00000537739.5	1996	7	7682	360	7682	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTTTGTGTGTTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	87821447	87823072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87821545_87821779_87821998_87822208_87822453_87822556
ENSMUSG00000004897.17_87821492_87823135_1	chr3	+	1094	4	ISM	ENSMUSG00000004897.17	ENST00000537739.5	1996	7	7726	297	7726	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGGAGGGAGGCTCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	87821491	87823135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87821545_87821779_87821998_87822208_87822453_87822556
ENSMUSG00000004897.17_87821873_87823271_1	chr3	+	1084	3	ISM	ENSMUSG00000004897.17	ENST00000537739.5	1996	7	8107	161	8107	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTCTTCTAGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	87821872	87823271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87821998_87822208_87822453_87822556
ENSMUSG00000004897.17_87821925_87823320_1	chr3	+	1081	3	ISM	ENSMUSG00000004897.17	ENST00000537739.5	1996	7	8159	112	8159	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCATCTCTCCTCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	87821924	87823320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87821998_87822208_87822453_87822556
ENSMUSG00000004897.17_87822207_87823439_1	chr3	+	1129	2	ISM	ENSMUSG00000004897.17	ENST00000537739.5	1996	7	8441	-7	8441	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTAATTCTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	87822206	87823439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87822453_87822556
ENSMUSG00000004929.13_80905869_80909199_1	chr10	+	457	2	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	0	9194	0	-9194	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCGCAGGCAGTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	80905868	80909199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80906113_80908986
ENSMUSG00000004929.13_80908980_80912884_1	chr10	+	477	3	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	3111	5509	3111	-5509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGCCCTGTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	80908979	80912884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80909200_80911344_80911494_80912776
ENSMUSG00000004929.13_80909113_80914326_1	chr10	+	470	5	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	3244	4067	3244	-4067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCTCTGGAGAAGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	80909112	80914326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303
ENSMUSG00000004929.13_80913788_80915776_1	chr10	+	431	4	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	7919	2617	7919	-2617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCGCCAAGCGGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	80913787	80915776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80913850_80914303_80914465_80915291_80915428_80915704
ENSMUSG00000004929.13_80915745_80916329_1	chr10	+	410	2	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	9876	2064	9876	-2064	internal_fragment	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCATGGTGGCCAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	80915744	80916329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80916072_80916246
ENSMUSG00000004929.13_80915802_80916401_1	chr10	+	425	2	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	9933	1992	9933	-1992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTTCCACGAGTTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	80915801	80916401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80916072_80916246
ENSMUSG00000004929.13_80915905_80916911_1	chr10	+	420	3	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	10036	1482	10036	-1482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCGTCCCAGATGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80915904	80916911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80916072_80916246_80916449_80916860
ENSMUSG00000004929.13_80915967_80916974_1	chr10	+	421	3	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	10098	1419	10098	-1419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACCGCACGGGCAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	80915966	80916974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80916072_80916246_80916449_80916860
ENSMUSG00000004929.13_80916029_80917028_1	chr10	+	413	3	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	10160	1365	10160	-1365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGCCAGGCCAATGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	80916028	80917028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80916072_80916246_80916449_80916860
ENSMUSG00000004929.13_80916408_80917495_1	chr10	+	419	4	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	10539	898	10539	-898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTATGGAGCGAAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	80916407	80917495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80916449_80916860_80917048_80917140_80917270_80917433
ENSMUSG00000004929.13_80916926_80917728_1	chr10	+	419	4	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	11057	665	11057	-665	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGGGGCTCTGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	80916925	80917728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80917048_80917140_80917270_80917433_80917571_80917697
ENSMUSG00000004929.13_80916975_80917781_1	chr10	+	423	4	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	11106	612	11106	-612	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCAAGCAGGACGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	80916974	80917781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80917048_80917140_80917270_80917433_80917571_80917697
ENSMUSG00000004929.13_80917031_80917835_1	chr10	+	421	4	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	11162	558	11162	-558	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCGCCTGCGTGCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	80917030	80917835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80917048_80917140_80917270_80917433_80917571_80917697
ENSMUSG00000004929.13_80917232_80917944_1	chr10	+	422	3	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	11363	449	11363	-449	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTCCCACCCCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	80917231	80917944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80917270_80917433_80917571_80917697
ENSMUSG00000004929.13_80917535_80918087_1	chr10	+	426	2	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	11666	306	11666	-306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTTGGCCAGCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	80917534	80918087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80917571_80917697
ENSMUSG00000004931.12_81102794_81109070_1	chr10	+	2262	12	NNC	ENSMUSG00000004931.12	novel	2268	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1075	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	81102793	81109070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_81102968_81104007_81104154_81104612_81105296_81105378_81105419_81106807_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ENSMUSG00000004931.12_81102794_81109070_2	chr10	+	2256	11	NNC	ENSMUSG00000004931.12	novel	2268	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	81102793	81109070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_81102968_81104007_81104154_81104612_81105296_81106773_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ENSMUSG00000004931.12_81102794_81109070_4	chr10	+	2262	12	NNC	ENSMUSG00000004931.12	novel	2268	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	81102793	81109070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_81102968_81104007_81104154_81104612_81105296_81105378_81105419_81106801_81106942_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ENSMUSG00000004934.15_80990177_80991481_1	chr10	-	218	3	ISM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	12276	1077	12276	-1077	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCAGCACCCCCGGTATA	NA	NA	NA	NA	NA	NA	NA	NA	80991481	80990176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80990207_80990281_80990413_80991424
ENSMUSG00000004934.15_80991508_80992904_1	chr10	-	211	3	ISM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	10853	2408	10853	-2408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGCAAATGAATGAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	80992904	80991507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80991586_80991666_80991741_80992845
ENSMUSG00000004934.15_80991566_80992951_1	chr10	-	200	3	ISM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	10806	2466	10806	-2466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCCTGCCGTGCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	80992951	80991565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80991586_80991666_80991741_80992845
ENSMUSG00000004934.15_80991693_80993093_1	chr10	-	187	3	ISM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	10664	2593	10664	-2593	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCGAGTGTCCCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	80993093	80991692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80991741_80992845_80992952_80993060
ENSMUSG00000004934.15_80993305_80999646_1	chr10	-	212	4	ISM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	4111	4205	4111	-4205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAGGTCAACCACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	80999646	80993304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80993362_80993484_80993527_80993766_80993852_80999618
ENSMUSG00000004934.15_80993786_80999795_1	chr10	-	243	2	ISM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	3962	4686	3962	-4686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGATCCGCAACTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	80999795	80993785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80993852_80999618
ENSMUSG00000004936.9_64093653_64098613_1	chr9	-	601	4	ISM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	62300	601	62300	-601	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTAGCTGGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	64098613	64093652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548
ENSMUSG00000004936.9_64093811_64098936_1	chr9	-	645	5	ISM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	61977	759	61977	-759	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTGTCTTTATCACTA	NA	NA	NA	NA	NA	NA	NA	NA	64098936	64093810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734
ENSMUSG00000004936.9_64094019_64111764_1	chr9	-	614	7	ISM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	49149	967	49149	-967	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTGGGCTTAACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	64111764	64094018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64111712
ENSMUSG00000004936.9_64094571_64112470_1	chr9	-	632	7	ISM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	48443	1519	48443	-1519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTTACAGAGCCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	64112470	64094570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392
ENSMUSG00000004936.9_64098812_64121713_1	chr9	-	560	6	ISM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	39200	5760	39200	-5760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTGGATGCCATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	64121713	64098811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680
ENSMUSG00000004936.9_64098863_64121763_1	chr9	-	559	6	ISM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	39150	5811	39150	-5811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTTGGGAGATACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	64121763	64098862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680
ENSMUSG00000004936.9_64098913_64121821_1	chr9	-	567	6	ISM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	39092	5861	39092	-5861	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTGTGCAGTCGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	64121821	64098912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680
ENSMUSG00000004936.9_64101071_64160540_1	chr9	-	572	6	ISM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	373	8019	373	-8019	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCAAACTCTGTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	64160540	64101070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
ENSMUSG00000004937.7_80880506_80884236_1	chr10	-	606	5	ISM	ENSMUSG00000004937.7	ENSMUST00000218208.2	1964	12	11776	595	11765	-595	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATCCCCACTGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	80884236	80880505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213
ENSMUSG00000004937.7_80880661_80885143_1	chr10	-	687	7	ISM	ENSMUSG00000004937.7	ENSMUST00000218208.2	1964	12	10869	750	10858	-750	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTACAGAAGACGACACAC	NA	NA	NA	NA	NA	NA	NA	NA	80885143	80880660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086
ENSMUSG00000004937.7_80880765_80885151_1	chr10	-	591	7	ISM	ENSMUSG00000004937.7	ENSMUST00000218208.2	1964	12	10861	854	10850	-854	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGACCTGCATGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	80885151	80880764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086
ENSMUSG00000004937.7_80880823_80885708_1	chr10	-	666	8	ISM	ENSMUSG00000004937.7	ENSMUST00000218208.2	1964	12	10304	912	10293	-912	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCTCCGCGGCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80885708	80880822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615
ENSMUSG00000004937.7_80882026_80896015_1	chr10	-	1023	11	FSM	ENSMUSG00000004937.7	ENST00000221566.7	1007	11	-14	-2	-1	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	2455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGAGGCCCCCATCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	80896015	80882025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888071_80895961
ENSMUSG00000004937.7_80884213_80887163_1	chr10	-	600	6	ISM	ENSMUSG00000004937.7	ENST00000221566.7	1007	11	8838	2185	8838	-2185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCGCACCCCATCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	80887163	80884212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056
ENSMUSG00000004937.7_80885660_80888013_1	chr10	-	205	3	ISM	ENSMUSG00000004937.7	ENST00000676984.1	913	10	8001	3632	7988	-3632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGAGCTCAACCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	80888013	80885659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80885716_80886832_80886918_80887949
ENSMUSG00000004939.8_81034004_81035546_1	chr10	-	1386	2	ISM	ENSMUSG00000004939.8	ENSMUST00000005069.8	1854	7	2339	0	2339	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGCTTCTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	81035546	81034003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81035281_81035437
ENSMUSG00000004939.8_81034183_81036196_1	chr10	-	1348	4	ISM	ENSMUSG00000004939.8	ENSMUST00000005069.8	1854	7	1689	179	1689	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTATAGTAGATGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	81036196	81034182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81035281_81035437_81035545_81035858_81035931_81036125
ENSMUSG00000004939.8_81034463_81037885_1	chr10	-	1395	7	FSM	ENSMUSG00000004939.8	ENSMUST00000005069.8	1854	7	0	459	0	-459	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACCAGTCTGGCCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	81037885	81034462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_81035281_81035437_81035545_81035858_81035931_81036125_81036283_81036365_81036415_81036724_81036816_81037784
ENSMUSG00000004945.16_5461145_5489840_1	chr17	-	770	3	ISM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	678	0	678	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGGGGGCGTGTGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	5489840	5461144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_5461743_5483716_5483855_5489806
ENSMUSG00000004945.16_5461323_5490518_1	chr17	-	770	4	FSM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	0	178	0	-178	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCTCTCGAGAGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	5490518	5461322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_5461743_5483716_5483855_5489806_5489908_5490407
ENSMUSG00000004947.16_136023654_136061346_1	chr5	+	2267	11	FSM	ENSMUSG00000004947.16	ENSMUST00000005072.10	2562	11	-77	372	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCCTCTGCCGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	136023653	136061346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_136023821_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136055323_136055462_136057355_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
ENSMUSG00000004947.16_136023736_136058020_1	chr5	+	1484	7	ISM	ENSMUSG00000004947.16	ENST00000413936.6	2062	10	37	3326	5	-3326	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCATGCCTTCCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	136023735	136058020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136023821_136038867_136039211_136040864_136041502_136050608_136050713_136055323_136055462_136057352_136057427_136057917
ENSMUSG00000004947.16_136025143_136061474_1	chr5	+	2229	10	ISM	ENSMUSG00000004947.16	ENSMUST00000005072.10	2562	11	1412	244	1412	128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTCTTGCCTCTGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	136025142	136061474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136055323_136055462_136057355_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
ENSMUSG00000004947.16_136025181_136061540_1	chr5	+	2257	10	ISM	ENSMUSG00000004947.16	ENSMUST00000005072.10	2562	11	1450	178	1450	-178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTATTGTACTTGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	136025180	136061540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136055323_136055462_136057355_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
ENSMUSG00000004947.16_136025231_136061595_1	chr5	+	2262	10	ISM	ENSMUSG00000004947.16	ENSMUST00000005072.10	2562	11	1500	123	1500	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCCCTTCCAGCCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	136025230	136061595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136055323_136055462_136057355_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
ENSMUSG00000004947.16_136038952_136061726_1	chr5	+	2233	9	ISM	ENSMUSG00000004947.16	ENSMUST00000005072.10	2562	11	15221	-8	15221	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGGGAAGTTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	136038951	136061726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136039211_136040864_136041502_136050608_136050713_136055323_136055462_136057355_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
ENSMUSG00000004951.11_135916872_135918415_1	chr5	+	781	3	FSM	ENSMUSG00000004951.11	ENST00000675134.1	719	3	-40	-22	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCTGACTCCAGAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	135916871	135918415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_135917289_135917902_135917946_135918094
ENSMUSG00000004951.11_135917004_135917967_1	chr5	+	345	2	ISM	ENSMUSG00000004951.11	ENST00000674638.1	735	3	92	426	92	-426	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTCTGATTCCTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	135917003	135917967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135917289_135917907
ENSMUSG00000004951.11_135917016_135917966_1	chr5	+	337	2	FSM	ENSMUSG00000004951.11	ENSMUST00000111155.2	930	2	144	449	104	-427	multi-exon	FALSE	canonical	NA	NA	NA	NA	2254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTCTGATTCCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	135917015	135917966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_135917289_135917902
ENSMUSG00000004951.11_135917185_135918231_1	chr5	+	339	3	FSM	ENSMUSG00000004951.11	ENST00000674547.1	774	3	273	162	273	-162	multi-exon	FALSE	canonical	NA	NA	NA	NA	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAATTGGGGGCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	135917184	135918231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_135917289_135917902_135918001_135918094
ENSMUSG00000004951.11_135917185_135918231_2	chr5	+	300	3	FSM	ENSMUSG00000004951.11	ENST00000674638.1	735	3	273	162	273	-162	multi-exon	FALSE	canonical	NA	NA	NA	NA	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAATTGGGGGCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	135917184	135918231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_135917289_135917907_135917967_135918094
ENSMUSG00000004951.11_135917185_135918231_3	chr5	+	305	3	FSM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	412	186	273	-162	multi-exon	FALSE	canonical	NA	NA	NA	NA	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAATTGGGGGCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	135917184	135918231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_135917289_135917902_135917967_135918094
ENSMUSG00000004951.11_135917185_135918415_1	chr5	+	484	3	FSM	ENSMUSG00000004951.11	ENST00000674638.1	735	3	273	-22	273	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCTGACTCCAGAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	135917184	135918415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_135917289_135917907_135917967_135918094
ENSMUSG00000004951.11_135917898_135918415_1	chr5	+	424	2	ISM	ENSMUSG00000004951.11	ENST00000674547.1	774	3	986	-22	986	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCTGACTCCAGAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	135917897	135918415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135918001_135918094
ENSMUSG00000004952.14_136112943_136132754_1	chr5	+	1745	16	ISM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	173	7960	-18	2886	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAGGACCAAAGGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	136112942	136132754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690
ENSMUSG00000004952.14_136112943_136133511_1	chr5	+	2111	17	NNC	ENSMUSG00000004952.14	novel	2353	19	NA	NA	-18	-2540	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	590	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGTGGAGGGCGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	136112942	136133511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_136113147_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127638_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133370
ENSMUSG00000004952.14_136112943_136134483_1	chr5	+	2134	18	ISM	ENSMUSG00000004952.14	ENST00000462172.5	2353	19	-18	1568	-18	-1568	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCATTGCGCAAAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	136112942	136134483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136113147_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127638_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457
ENSMUSG00000004952.14_136113091_136134533_1	chr5	+	2036	18	ISM	ENSMUSG00000004952.14	ENST00000462172.5	2353	19	130	1518	130	-1518	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCCTGGCATCTTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	136113090	136134533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136113147_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127638_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457
ENSMUSG00000004952.14_136118233_136135961_1	chr5	+	2047	18	ISM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	5463	4753	26	-90	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGAATGGAATGACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	136118232	136135961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924
ENSMUSG00000004952.14_136119956_136136052_1	chr5	+	2199	17	ISM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	7186	4662	-92	1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCAAGGAGAGGCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	136119955	136136052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924
ENSMUSG00000004952.14_136125554_136140147_1	chr5	+	1715	14	ISM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	12784	567	5506	-567	internal_fragment	TRUE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCACGGGCTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	136125553	136140147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136125647_136127541_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105
ENSMUSG00000004952.14_136127542_136134593_1	chr5	+	1321	10	NIC	ENSMUSG00000004952.14	novel	2914	21	NA	NA	7494	-1458	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGAGTGCTGGCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	136127541	136134593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_+_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136134457
ENSMUSG00000004952.14_136127542_136140384_1	chr5	+	1745	14	ISM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	14772	330	7494	-330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTAGAGCTACAGACGT	NA	NA	NA	NA	NA	NA	NA	NA	136127541	136140384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ENSMUSG00000004952.14_136130097_136140566_1	chr5	+	1718	12	ISM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	17327	148	10049	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACTGCTCTTGTAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	136130096	136140566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ENSMUSG00000004952.14_136130147_136140714_1	chr5	+	1816	12	ISM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	17377	0	10099	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGAGGTGTTGGGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	136130146	136140714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ENSMUSG00000004952.14_136130205_136140714_1	chr5	+	1758	12	ISM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	17435	0	10157	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGAGGTGTTGGGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	136130204	136140714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ENSMUSG00000004961.8_4542866_4549566_1	chr7	-	1475	7	FSM	ENSMUSG00000004961.8	ENST00000590851.5	1548	7	73	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGCCTCTGATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4549566	4542865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_4543298_4544078_4544213_4544825_4544944_4545189_4545358_4545721_4545890_4546016_4546137_4549231
ENSMUSG00000004961.8_4542866_4549598_1	chr7	-	1507	7	FSM	ENSMUSG00000004961.8	ENST00000590851.5	1548	7	41	0	-32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGCCTCTGATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4549598	4542865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_4543298_4544078_4544213_4544825_4544944_4545189_4545358_4545721_4545890_4546016_4546137_4549231
ENSMUSG00000004961.8_4542866_4549598_2	chr7	-	1501	7	NNC	ENSMUSG00000004961.8	novel	1548	7	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGCCTCTGATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4549598	4542865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_4543298_4544078_4544213_4544825_4544944_4545189_4545358_4545721_4545890_4546016_4546131_4549231
ENSMUSG00000004961.8_4542866_4549598_3	chr7	-	1501	7	NNC	ENSMUSG00000004961.8	novel	1548	7	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGCCTCTGATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4549598	4542865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_4543298_4544084_4544213_4544825_4544944_4545189_4545358_4545721_4545890_4546016_4546137_4549231
ENSMUSG00000004961.8_4542866_4549598_4	chr7	-	1505	7	NNC	ENSMUSG00000004961.8	novel	1548	7	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGCCTCTGATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4549598	4542865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_4543298_4544078_4544213_4544825_4544944_4545189_4545358_4545721_4545890_4546016_4546137_4549233
ENSMUSG00000004980.17_51437912_51443217_1	chr6	-	867	5	ISM	ENSMUSG00000004980.17	ENSMUST00000069949.13	1647	10	3657	0	3535	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGCACTGCTACAACT	NA	NA	NA	NA	NA	NA	NA	NA	51443217	51437911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51438414_51440390_51440474_51441068_51441192_51442158_51442222_51443121
ENSMUSG00000004980.17_51438101_51446752_1	chr6	-	1586	12	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	51446752	51438100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_51438414_51438899_51439036_51440390_51440474_51441074_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_51438261_51443647_1	chr6	-	778	7	ISM	ENSMUSG00000004980.17	ENSMUST00000069949.13	1647	10	3227	349	3105	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTAGTACAGGTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	51443647	51438260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51438414_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474
ENSMUSG00000004980.17_51438365_51443941_1	chr6	-	768	8	ISM	ENSMUSG00000004980.17	ENSMUST00000069949.13	1647	10	2933	453	2811	-261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTCAAGAAATAAGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	51443941	51438364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51438414_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885
ENSMUSG00000004980.17_51438397_51444032_1	chr6	-	827	8	ISM	ENSMUSG00000004980.17	ENSMUST00000069949.13	1647	10	2842	485	2720	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAACTAATGAAGAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	51444032	51438396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51438414_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885
ENSMUSG00000004980.17_51439740_51442221_1	chr6	-	1040	4	ISM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	4604	1636	4531	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	51442221	51439739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158
ENSMUSG00000004980.17_51439780_51442206_1	chr6	-	829	5	ISM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	4546	40	4546	-40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTACATTTATGATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	51442206	51439779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158
ENSMUSG00000004980.17_51439913_51443298_1	chr6	-	808	7	ISM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	3454	173	3454	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGTGACATGTGAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	51443298	51439912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282
ENSMUSG00000004980.17_51440068_51443523_1	chr6	-	788	8	ISM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	3229	328	3229	-328	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTATTTAATAACATTAC	NA	NA	NA	NA	NA	NA	NA	NA	51443523	51440067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474
ENSMUSG00000004980.17_51440086_51443384_1	chr6	-	877	6	ISM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	3441	1982	3368	-346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTGTGAATGGATTGG	NA	NA	NA	NA	NA	NA	NA	NA	51443384	51440085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282
ENSMUSG00000004980.17_51440119_51443647_1	chr6	-	861	8	ISM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	3105	379	3105	-379	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGCAGAAGACACCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	51443647	51440118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474
ENSMUSG00000004980.17_51440185_51443647_1	chr6	-	795	8	ISM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	3105	445	3105	-445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGGTTATGGAAATAAC	NA	NA	NA	NA	NA	NA	NA	NA	51443647	51440184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474
ENSMUSG00000004980.17_51441068_51444275_1	chr6	-	839	7	ISM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	2477	1328	2477	-1328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTATTAAACACAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	51444275	51441067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ENSMUSG00000004980.17_51441161_51446752_1	chr6	-	1004	10	ISM	ENSMUSG00000004980.17	ENSMUST00000114459.8	1728	12	54	1421	0	-1421	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAATTATAACCAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	51446752	51441160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ENSMUSG00000004980.17_51442158_51446864_1	chr6	-	966	8	ISM	ENSMUSG00000004980.17	ENSMUST00000114459.8	1728	12	-58	2418	10	-2418	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTTTAATTAAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	51446864	51442157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ENSMUSG00000004980.17_51443475_51447088_1	chr6	-	943	5	ISM	ENSMUSG00000004980.17	ENSMUST00000114459.8	1728	12	-282	3735	32	-3735	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTCTGTTCATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	51447088	51443474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ENSMUSG00000004994.13_84985058_84990573_1	chr8	-	1014	6	ISM	ENSMUSG00000004994.13	ENSMUST00000005120.12	1441	9	6403	128	6403	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCACATTGCTGCCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	84990573	84985057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84985556_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490
ENSMUSG00000004994.13_84985204_84993467_1	chr8	-	925	8	ISM	ENSMUSG00000004994.13	ENSMUST00000005120.12	1441	9	3509	274	3509	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCCTAGGTTCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	84993467	84985203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84985556_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464
ENSMUSG00000004994.13_84985205_84986956_1	chr8	-	524	3	ISM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	10053	781	10020	-275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCCCTAGGTTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	84986956	84985204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84985556_84985741_84985881_84986922
ENSMUSG00000004994.13_84985260_84987005_1	chr8	-	518	3	ISM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	10004	836	9971	-330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCATCCAGGACCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	84987005	84985259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84985556_84985741_84985881_84986922
ENSMUSG00000004994.13_84985362_84987186_1	chr8	-	521	4	ISM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	9823	938	9790	-432	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCAGAAAGTCCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	84987186	84985361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171
ENSMUSG00000004994.13_84985418_84987241_1	chr8	-	520	4	ISM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	9768	994	9735	-488	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAGCACAGGCACGGTG	NA	NA	NA	NA	NA	NA	NA	NA	84987241	84985417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171
ENSMUSG00000004994.13_84987187_84993605_1	chr8	-	523	6	ISM	ENSMUSG00000004994.13	ENSMUST00000005120.12	1441	9	3371	2257	3371	-2257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGCTGACCACAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	84993605	84987186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464
ENSMUSG00000004994.13_84987239_84993658_1	chr8	-	524	6	ISM	ENSMUSG00000004994.13	ENSMUST00000005120.12	1441	9	3318	2309	3318	-2309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGTGCCAGTCGCAA	NA	NA	NA	NA	NA	NA	NA	NA	84993658	84987238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464
ENSMUSG00000004996.10_84976535_84983888_1	chr8	-	2749	5	NNC	ENSMUSG00000004996.10	novel	2819	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTTTTACAATACACAAA	NA	NA	NA	NA	NA	NA	NA	NA	84983888	84976534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_84978341_84980491_84980717_84980809_84980982_84982872_84983049_84983518
ENSMUSG00000004996.10_84978230_84983888_1	chr8	-	901	4	NNC	ENSMUSG00000004996.10	novel	936	5	NA	NA	6	-1695	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1977	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTCCGTCTTCTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	84983888	84978229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_84978341_84980491_84980717_84980804_84980982_84983500
ENSMUSG00000004996.10_84978230_84983888_2	chr8	-	906	4	ISM	ENSMUSG00000004996.10	ENST00000319545.12	936	5	6	73769	6	-1695	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTCCGTCTTCTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	84983888	84978229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84978341_84980491_84980717_84980804_84980982_84983495
ENSMUSG00000005054.8_78261605_78263312_1	chr10	+	357	3	FSM	ENSMUSG00000005054.8	ENSMUST00000005185.8	603	3	102	144	102	-144	multi-exon	TRUE	canonical	NA	NA	NA	NA	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCCCCCTCGGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	78261604	78263312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_78261692_78262760_78262863_78263144
ENSMUSG00000005054.8_78262757_78263456_1	chr10	+	418	2	ISM	ENSMUSG00000005054.8	ENSMUST00000005185.8	603	3	1254	0	1254	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGTGTCCTTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78262756	78263456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_78262863_78263144
ENSMUSG00000005069.13_124373775_124376413_1	chr6	-	1886	4	ISM	ENSMUSG00000005069.13	ENSMUST00000112530.8	3051	15	14979	-1	14585	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCCGCTGCTGACGTTG	NA	NA	NA	NA	NA	NA	NA	NA	124376413	124373774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206
ENSMUSG00000005069.13_124374541_124390262_1	chr6	-	1783	11	ISM	ENSMUSG00000005069.13	ENSMUST00000112531.8	3075	15	1560	765	736	387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGCAGTTGTGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	124390262	124374540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227
ENSMUSG00000005069.13_124374697_124390583_1	chr6	-	1780	12	ISM	ENSMUSG00000005069.13	ENSMUST00000112531.8	3075	15	1239	921	415	231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTCTTTCTGTTCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	124390583	124374696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527
ENSMUSG00000005069.13_124374757_124390652_1	chr6	-	1789	12	ISM	ENSMUSG00000005069.13	ENSMUST00000112531.8	3075	15	1170	981	346	171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTAGGGATGAGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	124390652	124374756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527
ENSMUSG00000005069.13_124374870_124391392_1	chr6	-	1867	14	ISM	ENSMUSG00000005069.13	ENSMUST00000112531.8	3075	15	430	1094	0	58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCTCTCCTCAAACGGGC	NA	NA	NA	NA	NA	NA	NA	NA	124391392	124374869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245
ENSMUSG00000005069.13_124376397_124380824_1	chr6	-	382	5	ISM	ENSMUSG00000005069.13	ENST00000400933.2	1635	13	10174	1469	10174	-1469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATAACCGGACAGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	124380824	124376396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124376414_124376817_124376889_124377046_124377191_124380074_124380171_124380770
ENSMUSG00000005078.17_72132818_72136798_1	chr12	+	283	3	ISM	ENSMUSG00000005078.17	ENSMUST00000117449.8	1874	7	187	11437	-38	-10837	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGACTGGCTCTATCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	72132817	72136798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72132958_72136106_72136181_72136729
ENSMUSG00000005078.17_72132859_72147999_1	chr12	+	1334	7	NNC	ENSMUSG00000005078.17	novel	1874	7	NA	NA	3	-236	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTCGAGGAATTACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	72132858	72147999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_72132882_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUSG00000005078.17_72136125_72148048_1	chr12	+	1342	6	ISM	ENSMUSG00000005078.17	ENST00000356057.9	1636	7	3269	247	3269	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGAAACAAAGGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	72136124	72148048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUSG00000005078.17_72136763_72148235_1	chr12	+	1440	5	ISM	ENSMUSG00000005078.17	ENST00000356057.9	1636	7	3907	60	3907	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTCTGATAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	72136762	72148235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUSG00000005087.18_102642378_102661844_1	chr2	-	2695	5	ISM	ENSMUSG00000005087.18	ENSMUST00000060516.14	3495	14	69996	-497	69847	497	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTAGTTGGGTTGTGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	102661844	102642377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674
ENSMUSG00000005087.18_102642555_102664664_1	chr2	-	2731	7	ISM	ENSMUSG00000005087.18	ENSMUST00000060516.14	3495	14	67176	-320	67027	320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCCACAACAGGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	102664664	102642554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578
ENSMUSG00000005087.18_102642677_102668248_1	chr2	-	2716	8	ISM	ENSMUSG00000005087.18	ENSMUST00000060516.14	3495	14	63592	-198	63443	198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATAAGCCAGTTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	102668248	102642676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102668157
ENSMUSG00000005087.18_102642747_102668290_1	chr2	-	2688	8	ISM	ENSMUSG00000005087.18	ENSMUST00000060516.14	3495	14	63550	-128	63401	128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCCTCCTTCCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	102668290	102642746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102668157
ENSMUSG00000005087.18_102642892_102672686_1	chr2	-	2737	10	ISM	ENSMUSG00000005087.18	ENSMUST00000111198.9	1981	16	59009	-1583	59005	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAAAAAAAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	102672686	102642891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102668157_102668284_102669702_102669823_102672605
ENSMUSG00000005087.18_102643224_102676777_1	chr2	-	2711	13	ISM	ENSMUSG00000005087.18	ENSMUST00000005218.15	5614	19	55193	1738	54914	-332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAAGCGAGTTGGTACT	NA	NA	NA	NA	NA	NA	NA	NA	102676777	102643223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102668157_102668284_102669702_102669823_102672605_102672723_102673180_102673295_102675629_102675756_102676747
ENSMUSG00000005087.18_102643493_102683435_1	chr2	-	2731	15	ISM	ENSMUSG00000005087.18	ENSMUST00000005218.15	5614	19	48535	2007	48256	-601	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTTGTGCTTTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	102683435	102643492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102668157_102668284_102669702_102669823_102672605_102672723_102673180_102673295_102675629_102675756_102676747_102676865_102679001_102679128_102683359
ENSMUSG00000005087.18_102643562_102683483_1	chr2	-	2710	15	ISM	ENSMUSG00000005087.18	ENSMUST00000005218.15	5614	19	48487	2076	48208	-670	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCCAGGCTCTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	102683483	102643561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102668157_102668284_102669702_102669823_102672605_102672723_102673180_102673295_102675629_102675756_102676747_102676865_102679001_102679128_102683359
ENSMUSG00000005087.18_102643637_102683540_1	chr2	-	2692	15	ISM	ENSMUSG00000005087.18	ENSMUST00000005218.15	5614	19	48430	2151	48151	716	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGCTAGAGCATCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	102683540	102643636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102668157_102668284_102669702_102669823_102672605_102672723_102673180_102673295_102675629_102675756_102676747_102676865_102679001_102679128_102683359
ENSMUSG00000005087.18_102643759_102691941_1	chr2	-	2717	17	ISM	ENSMUSG00000005087.18	ENSMUST00000005218.15	5614	19	40029	2273	39750	594	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAATAAGTACCGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	102691941	102643758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102668157_102668284_102669702_102669823_102672605_102672723_102673180_102673295_102675629_102675756_102676747_102676865_102679001_102679128_102683359_102683582_102686243_102686313_102691904
ENSMUSG00000005087.18_102643806_102692024_1	chr2	-	2753	17	ISM	ENSMUSG00000005087.18	ENSMUST00000005218.15	5614	19	39946	2320	39667	547	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTAGGTTACTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	102692024	102643805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102668157_102668284_102669702_102669823_102672605_102672723_102673180_102673295_102675629_102675756_102676747_102676865_102679001_102679128_102683359_102683582_102686243_102686313_102691904
ENSMUSG00000005087.18_102643945_102695679_1	chr2	-	2685	18	ISM	ENSMUSG00000005087.18	ENSMUST00000005218.15	5614	19	36291	2459	36012	408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGAGATCCCCAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	102695679	102643944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102668157_102668284_102669702_102669823_102672605_102672723_102673180_102673295_102675629_102675756_102676747_102676865_102679001_102679128_102683359_102683582_102686243_102686313_102691904_102692042_102695625
ENSMUSG00000005087.18_102643985_102695761_1	chr2	-	2727	18	ISM	ENSMUSG00000005087.18	ENSMUST00000005218.15	5614	19	36209	2499	35930	368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATAGACTCCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	102695761	102643984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102668157_102668284_102669702_102669823_102672605_102672723_102673180_102673295_102675629_102675756_102676747_102676865_102679001_102679128_102683359_102683582_102686243_102686313_102691904_102692042_102695625
ENSMUSG00000005087.18_102644069_102695791_1	chr2	-	2673	18	ISM	ENSMUSG00000005087.18	ENSMUST00000005218.15	5614	19	36179	2583	35900	284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCATATTGCCTCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	102695791	102644068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102668157_102668284_102669702_102669823_102672605_102672723_102673180_102673295_102675629_102675756_102676747_102676865_102679001_102679128_102683359_102683582_102686243_102686313_102691904_102692042_102695625
ENSMUSG00000005087.18_102644163_102672632_1	chr2	-	1286	9	ISM	ENSMUSG00000005087.18	ENSMUST00000111194.8	5045	14	59378	2677	59059	190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACCTTATCCCTACCCA	NA	NA	NA	NA	NA	NA	NA	NA	102672632	102644162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102669702_102669823_102672605
ENSMUSG00000005087.18_102644178_102731751_1	chr2	-	2703	19	FSM	ENSMUSG00000005087.18	ENSMUST00000005218.15	5614	19	219	2692	-37	175	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTGGTCCCTATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	102731751	102644177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102668157_102668284_102669702_102669823_102672605_102672723_102673180_102673295_102675629_102675756_102676747_102676865_102679001_102679128_102683359_102683582_102686243_102686313_102691904_102692042_102695625_102695792_102731612
ENSMUSG00000005087.18_102644247_102672684_1	chr2	-	1254	9	ISM	ENSMUSG00000005087.18	ENSMUST00000111194.8	5045	14	59326	2761	59007	106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCCAGTTCCTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	102672684	102644246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102669702_102669823_102672605
ENSMUSG00000005087.18_102644311_102672722_1	chr2	-	1228	9	ISM	ENSMUSG00000005087.18	ENSMUST00000111194.8	5045	14	59288	2825	58969	42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTTATGAAAATAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	102672722	102644310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102669702_102669823_102672605
ENSMUSG00000005087.18_102644353_102695691_1	chr2	-	578	5	ISM	ENSMUSG00000005087.18	ENST00000526669.6	780	6	36023	0	36000	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCCTTTTTTATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	102695691	102644352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654653_102691985_102692042_102695625
ENSMUSG00000005087.18_102644475_102686312_1	chr2	-	1355	11	ISM	ENSMUSG00000005087.18	ENSMUST00000111194.8	5045	14	45698	2989	45379	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACGCCATTAACTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	102686312	102644474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102669702_102669823_102672605_102672723_102683359_102683582_102686243
ENSMUSG00000005087.18_102644475_102731695_2	chr2	-	1036	8	FSM	ENSMUSG00000005087.18	ENST00000352818.8	1028	8	-4	-4	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACGCCATTAACTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	102731695	102644474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_102644683_102652552_102652632_102654605_102654678_102683359_102683582_102686243_102686313_102691904_102692042_102695625_102695792_102731612
ENSMUSG00000005087.18_102652551_102692041_1	chr2	-	1286	11	ISM	ENSMUSG00000005087.18	ENSMUST00000111194.8	5045	14	39969	11065	39650	-8072	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAGAGTGCCCCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	102692041	102652550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102669702_102669823_102672605_102672723_102683359_102683582_102686243_102686313_102691904
ENSMUSG00000005087.18_102652588_102683434_1	chr2	-	260	4	ISM	ENSMUSG00000005087.18	ENSMUST00000099673.9	2848	9	48421	9696	48257	-8109	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGTCTGCATCGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	102683434	102652587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102652632_102654605_102654678_102658886_102658956_102683359
ENSMUSG00000005087.18_102654606_102695691_1	chr2	-	1271	11	ISM	ENSMUSG00000005087.18	ENSMUST00000111194.8	5045	14	36319	13120	36000	-10127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTTTCCATCATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	102695691	102654605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102669702_102669823_102672605_102672723_102683359_102683582_102686243_102686313_102691904_102692042_102695625
ENSMUSG00000005087.18_102661703_102731714_1	chr2	-	1304	10	ISM	ENSMUSG00000005087.18	ENSMUST00000111194.8	5045	14	296	20217	0	-17224	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTAATGTTGATGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	102731714	102661702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102661882_102662827_102662918_102664578_102664681_102669702_102669823_102672605_102672723_102683359_102683582_102686243_102686313_102691904_102692042_102695625_102695792_102731612
ENSMUSG00000005087.18_102661792_102731751_1	chr2	-	1252	10	ISM	ENSMUSG00000005087.18	ENSMUST00000111194.8	5045	14	259	20306	-37	-17313	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAATGGAAAATGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	102731751	102661791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102661882_102662827_102662918_102664578_102664681_102669702_102669823_102672605_102672723_102683359_102683582_102686243_102686313_102691904_102692042_102695625_102695792_102731612
ENSMUSG00000005089.16_102566333_102607929_1	chr2	+	1515	9	ISM	ENSMUSG00000005089.16	ENST00000644868.1	1864	11	47	4038	44	-513	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACAGGGAAAGCAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	102566332	102607929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_102566429_102568121_102568275_102570033_102570285_102574152_102574319_102578813_102578941_102586251_102586486_102591359_102591555_102597277_102597413_102607771
ENSMUSG00000005089.16_102568252_102611902_1	chr2	+	1455	9	ISM	ENSMUSG00000005089.16	ENST00000644299.1	2954	11	1966	1305	1963	-65	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAACTCCCCAGCGTA	NA	NA	NA	NA	NA	NA	NA	NA	102568251	102611902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_102568275_102570033_102570285_102574152_102574319_102578813_102578941_102586251_102586486_102591359_102591555_102597277_102597413_102607771_102608001_102611807
ENSMUSG00000005089.16_102574153_102612151_1	chr2	+	1430	7	ISM	ENSMUSG00000005089.16	ENST00000644299.1	2954	11	7867	1056	7864	63	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTCTTGCCAGCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	102574152	102612151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_102574319_102578813_102578941_102586251_102586486_102591359_102591555_102597277_102597413_102607771_102608001_102611807
ENSMUSG00000005089.16_102574193_102612212_1	chr2	+	1451	7	ISM	ENSMUSG00000005089.16	ENST00000644299.1	2954	11	7907	995	7904	124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1462	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGACAGGATGAAAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	102574192	102612212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_102574319_102578813_102578941_102586251_102586486_102591359_102591555_102597277_102597413_102607771_102608001_102611807
ENSMUSG00000005089.16_102574253_102612256_1	chr2	+	1435	7	ISM	ENSMUSG00000005089.16	ENST00000644299.1	2954	11	7967	951	7964	168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACGAGCACACATGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	102574252	102612256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_102574319_102578813_102578941_102586251_102586486_102591359_102591555_102597277_102597413_102607771_102608001_102611807
ENSMUSG00000005089.16_102578850_102612366_1	chr2	+	1443	6	ISM	ENSMUSG00000005089.16	ENST00000644299.1	2954	11	12564	841	12561	-123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1532	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGCACCTACATTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	102578849	102612366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_102578941_102586251_102586486_102591359_102591555_102597277_102597413_102607771_102608001_102611807
ENSMUSG00000005089.16_102586252_102611902_1	chr2	+	959	6	ISM	ENSMUSG00000005089.16	ENST00000644868.1	1864	11	19966	65	19963	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAACTCCCCAGCGTA	NA	NA	NA	NA	NA	NA	NA	NA	102586251	102611902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_102586486_102591359_102591555_102597277_102597413_102607771_102608001_102611061_102611133_102611807
ENSMUSG00000005089.16_102586252_102611972_1	chr2	+	1029	6	ISM	ENSMUSG00000005089.16	ENST00000644868.1	1864	11	19966	-5	19963	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCATATGTTTCTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	102586251	102611972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_102586486_102591359_102591555_102597277_102597413_102607771_102608001_102611061_102611133_102611807
ENSMUSG00000005089.16_102586252_102612489_1	chr2	+	1475	5	ISM	ENSMUSG00000005089.16	ENST00000644299.1	2954	11	19966	718	19963	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAAAGGCCACAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	102586251	102612489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_102586486_102591359_102591555_102597277_102597413_102607771_102608001_102611807
ENSMUSG00000005089.16_102612137_102612714_1	chr2	+	499	2	ISM	ENSMUSG00000005089.16	ENST00000644299.1	2954	11	45851	493	45848	225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTCAGAATTAAATATTCC	NA	NA	NA	NA	NA	NA	NA	NA	102612136	102612714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_102612523_102612601
ENSMUSG00000005089.16_102612335_102612907_1	chr2	+	494	2	ISM	ENSMUSG00000005089.16	ENST00000644299.1	2954	11	46049	300	46046	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCTCACATTAAGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	102612334	102612907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_102612523_102612601
ENSMUSG00000005103.13_38684923_38687013_1	chr5	-	479	2	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	31965	-7	31965	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGAGCGTACCTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	38687013	38684922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_38685256_38686867
ENSMUSG00000005103.13_38685064_38687469_1	chr5	-	527	3	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	31509	134	31509	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTTCCTGCCTGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	38687469	38685063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_38685256_38686867_38687013_38687279
ENSMUSG00000005103.13_38685172_38690914_1	chr5	-	602	5	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	28064	242	28064	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTGGACAATCACCTAC	NA	NA	NA	NA	NA	NA	NA	NA	38690914	38685171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826
ENSMUSG00000005103.13_38686946_38692592_1	chr5	-	506	5	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	26386	2016	26386	-2016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCCTCTGGCGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	38692592	38686945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526
ENSMUSG00000005103.13_38687311_38694569_1	chr5	-	587	5	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	24409	2381	24409	-2381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTATTCAGTGTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	38694569	38687310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_38687454_38688357_38688469_38690826_38690915_38692526_38692684_38694481
ENSMUSG00000005103.13_38687419_38697402_1	chr5	-	526	6	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	21576	2489	21576	-2489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTAAAGGATGAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	38697402	38687418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_38687454_38688357_38688469_38690826_38690915_38692526_38692684_38694481_38694570_38697355
ENSMUSG00000005103.13_38688405_38697465_1	chr5	-	507	5	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	21513	3475	21513	-3475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTCGCTGTGCACCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	38697465	38688404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_38688469_38690826_38690915_38692526_38692684_38694481_38694570_38697355
ENSMUSG00000005103.13_38688445_38697527_1	chr5	-	529	5	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	21451	3515	21451	-3515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCTTCAGCATCGACAA	NA	NA	NA	NA	NA	NA	NA	NA	38697527	38688444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_38688469_38690826_38690915_38692526_38692684_38694481_38694570_38697355
ENSMUSG00000005103.13_38688446_38697513_1	chr5	-	517	5	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	21465	-3516	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGCTTCAGCATCGACA	NA	NA	NA	NA	NA	NA	NA	NA	38697513	38688445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_38688469_38690826_38690915_38692526_38692669_38694463_38694570_38697355
ENSMUSG00000005103.13_38692527_38697929_1	chr5	-	563	4	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	21049	-7597	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCTGCCTGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	38697929	38692526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_38692667_38694463_38694570_38697355_38697590_38697846
ENSMUSG00000005103.13_38692607_38698191_1	chr5	-	531	5	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	20787	-7677	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATGAGTCTGAGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	38698191	38692606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_38692669_38694463_38694570_38697355_38697590_38697846_38697928_38698143
ENSMUSG00000005103.13_38692621_38698184_1	chr5	-	507	5	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	20794	7691	20794	-7691	internal_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAGGATGACTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	38698184	38692620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_38692684_38694481_38694570_38697355_38697590_38697846_38697928_38698143
ENSMUSG00000005103.13_38697355_38703197_1	chr5	-	575	4	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	15781	12425	15781	-12425	internal_fragment	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCTTATTCTAGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	38703197	38697354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_38697590_38697846_38697928_38698143_38698222_38703016
ENSMUSG00000005103.13_38697529_38704356_1	chr5	-	471	5	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	14622	12599	14622	-12599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGGATGTCAATGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	38704356	38697528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286
ENSMUSG00000005103.13_38697847_38708810_1	chr5	-	579	5	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	10168	12917	10168	-12917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACGAAAATGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	38708810	38697846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719
ENSMUSG00000005103.13_38703018_38718886_1	chr5	-	569	5	ISM	ENSMUSG00000005103.13	ENSMUST00000005234.13	3089	15	263	18862	92	-18088	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAGTGAGCTTTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	38718886	38703017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ENSMUSG00000005103.13_38704337_38719059_1	chr5	-	512	4	ISM	ENSMUSG00000005103.13	ENSMUST00000005234.13	3089	15	90	20181	-81	-19407	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACGGAAGACAGTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	38719059	38704336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_38704435_38708719_38708811_38718422_38718545_38718858
ENSMUSG00000005124.11_66763236_66789291_1	chr15	+	955	4	ISM	ENSMUSG00000005124.11	ENSMUST00000005255.9	5097	5	67	5759	67	-2013	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTGGACATCCAACTAC	NA	NA	NA	NA	NA	NA	NA	NA	66763235	66789291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_66763484_66778249_66778530_66784677_66784939_66789125
ENSMUSG00000005124.11_66763357_66791084_1	chr15	+	943	5	FSM	ENSMUSG00000005124.11	ENSMUST00000005255.9	5097	5	188	3966	0	-220	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGACCCAAGTACTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	66763356	66791084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_66763484_66778249_66778530_66784677_66784939_66789125_66789320_66791003
ENSMUSG00000005124.11_66763357_66791306_1	chr15	+	430	2	FSM	ENSMUSG00000005124.11	ENST00000519433.1	442	2	14	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGTGGCTCAGGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	66763356	66791306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_66763484_66791003
ENSMUSG00000005124.11_66763357_66791306_2	chr15	+	904	4	FSM	ENSMUSG00000005124.11	ENST00000220856.6	851	4	-51	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGTGGCTCAGGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	66763356	66791306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_66763484_66778249_66778530_66789125_66789320_66791003
ENSMUSG00000005124.11_66763464_66791306_1	chr15	+	791	4	NNC	ENSMUSG00000005124.11	novel	851	4	NA	NA	56	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGTGGCTCAGGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	66763463	66791306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_66763484_66778249_66778524_66789125_66789320_66791003
ENSMUSG00000005124.11_66778289_66791306_1	chr15	+	999	4	ISM	ENSMUSG00000005124.11	ENSMUST00000005255.9	5097	5	15120	3744	14881	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGTGGCTCAGGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	66778288	66791306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_66778530_66784677_66784939_66789125_66789320_66791003
ENSMUSG00000005124.11_66784705_66791492_1	chr15	+	917	3	ISM	ENSMUSG00000005124.11	ENSMUST00000005255.9	5097	5	21536	3558	21297	188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGACATTCTACATCATTC	NA	NA	NA	NA	NA	NA	NA	NA	66784704	66791492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_66784939_66789125_66789320_66791003
ENSMUSG00000005124.11_66784812_66791606_1	chr15	+	924	3	ISM	ENSMUSG00000005124.11	ENSMUST00000005255.9	5097	5	21643	3444	21404	302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTGTCCAAGGAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	66784811	66791606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_66784939_66789125_66789320_66791003
ENSMUSG00000005124.11_66784879_66791650_1	chr15	+	901	3	ISM	ENSMUSG00000005124.11	ENSMUST00000005255.9	5097	5	21710	3400	21471	346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCCTCAGATGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	66784878	66791650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_66784939_66789125_66789320_66791003
ENSMUSG00000005125.14_66801167_66841444_2	chr15	-	2844	16	FSM	ENSMUSG00000005125.14	ENSMUST00000005256.14	2889	16	45	0	45	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTCTTTTCCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66841444	66801166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66831210_66831247_66832320_66832402_66841352
ENSMUSG00000005125.14_66801167_66841444_3	chr15	-	2827	15	NNC	ENSMUSG00000005125.14	novel	2889	16	NA	NA	45	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTCTTTTCCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66841444	66801166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66832301_66832402_66841352
ENSMUSG00000005125.14_66801167_66841444_4	chr15	-	2842	16	NNC	ENSMUSG00000005125.14	novel	2889	16	NA	NA	45	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTCTTTTCCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66841444	66801166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820328_66831206_66831247_66832320_66832402_66841352
ENSMUSG00000005142.11_85809944_85818493_1	chr8	+	1461	12	ISM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	0	6418	0	-6418	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGCCATTACAAACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	85809943	85818493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466
ENSMUSG00000005142.11_85809944_85818559_1	chr8	+	1527	12	ISM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	0	6352	0	-6352	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTTCGGAGCGTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	85809943	85818559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466
ENSMUSG00000005142.11_85811312_85819557_1	chr8	+	1437	12	ISM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	1368	5354	1368	-5354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAATGAGTGACCTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	85811311	85819557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460
ENSMUSG00000005142.11_85811361_85819609_1	chr8	+	1440	12	ISM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	1417	5302	1417	-5302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACACAAGTCCCATCATG	NA	NA	NA	NA	NA	NA	NA	NA	85811360	85819609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460
ENSMUSG00000005142.11_85812135_85820819_1	chr8	+	1429	13	ISM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	2191	4092	2191	-4092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCGCTGGGCTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	85812134	85820819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734
ENSMUSG00000005142.11_85813812_85822034_1	chr8	+	1474	13	ISM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	3868	2877	3868	-2877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGGGAAATCCTGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	85813811	85822034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954
ENSMUSG00000005142.11_85815181_85822255_1	chr8	+	1451	13	ISM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	5237	2656	5237	-2656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTGCCCTGCCACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	85815180	85822255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167
ENSMUSG00000005142.11_85817756_85823049_1	chr8	+	1437	13	ISM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	7812	1862	7812	-1862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCCTGGCCCCTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	85817755	85823049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899
ENSMUSG00000005142.11_85818166_85823439_1	chr8	+	1437	12	ISM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	8222	1472	8222	-1472	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGATTCGGATCGCAA	NA	NA	NA	NA	NA	NA	NA	NA	85818165	85823439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334
ENSMUSG00000005142.11_85818505_85823650_1	chr8	+	1436	12	ISM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	8561	1261	8561	-1261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTCCAGGCTCAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	85818504	85823650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580
ENSMUSG00000005142.11_85819577_85824296_1	chr8	+	1432	11	ISM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	9633	615	9633	-615	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACCCCAGGCCCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	85819576	85824296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ENSMUSG00000005142.11_85820555_85824415_1	chr8	+	1471	10	ISM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	10611	496	10611	-496	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGGCCAGCTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	85820554	85824415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ENSMUSG00000005148.9_99532196_99551554_1	chr14	+	2043	4	FSM	ENSMUSG00000005148.9	ENST00000539231.5	2976	4	15	918	15	-918	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGATTGAAATGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	99532195	99551554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_99532337_99538816_99539691_99540853_99540914_99550586
ENSMUSG00000005148.9_99532243_99551608_1	chr14	+	2050	4	FSM	ENSMUSG00000005148.9	ENST00000539231.5	2976	4	62	864	62	-864	multi-exon	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAACTGAAATGCTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	99532242	99551608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_99532337_99538816_99539691_99540853_99540914_99550586
ENSMUSG00000005148.9_99532248_99551618_1	chr14	+	2050	4	NNC	ENSMUSG00000005148.9	novel	2976	4	NA	NA	67	-854	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCTTAAAGATAGCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	99532247	99551618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_99532337_99538821_99539691_99540853_99540914_99550586
ENSMUSG00000005148.9_99532274_99551678_1	chr14	+	2089	4	FSM	ENSMUSG00000005148.9	ENST00000539231.5	2976	4	93	794	93	-794	multi-exon	FALSE	canonical	NA	NA	NA	NA	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	99532273	99551678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_99532337_99538816_99539691_99540853_99540914_99550586
ENSMUSG00000005148.9_99536127_99551911_1	chr14	+	2791	4	FSM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	0	561	0	-561	multi-exon	FALSE	canonical	NA	NA	NA	NA	2495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGTAGCCTGTTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	99536126	99551911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_99536659_99538816_99539691_99540853_99540914_99550586
ENSMUSG00000005148.9_99536590_99552302_1	chr14	+	2719	4	FSM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	463	170	0	-170	multi-exon	FALSE	canonical	NA	NA	NA	NA	4375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATAACTCGGCTGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	99536589	99552302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_99536659_99538816_99539691_99540853_99540914_99550586
ENSMUSG00000005148.9_99538935_99552473_1	chr14	+	2703	3	ISM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	2808	-1	2345	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGCCTTCTTGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	99538934	99552473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_99539691_99540853_99540914_99550586
ENSMUSG00000005148.9_99539398_99552302_1	chr14	+	2069	3	ISM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	3271	170	2808	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATAACTCGGCTGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	99539397	99552302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_99539691_99540853_99540914_99550586
ENSMUSG00000005148.9_99539510_99552473_1	chr14	+	2128	3	ISM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	3383	-1	2920	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGCCTTCTTGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	99539509	99552473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_99539691_99540853_99540914_99550586
ENSMUSG00000005150.17_85801847_85802736_1	chr8	-	325	3	ISM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	4639	183	4639	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCAGAGGGTGGAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	85802736	85801846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85801973_85802451_85802567_85802652
ENSMUSG00000005150.17_85801936_85802920_1	chr8	-	336	4	ISM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	4455	272	4455	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTACAGTCACTGGCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	85802920	85801935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85801973_85802451_85802567_85802652_85802762_85802845
ENSMUSG00000005150.17_85802753_85806775_1	chr8	-	280	5	ISM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	600	1089	600	-1089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCACCTGCTTCAGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	85806775	85802752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85802762_85802845_85802914_85806209_85806337_85806417_85806467_85806748
ENSMUSG00000005150.17_85806211_85806964_1	chr8	-	304	4	ISM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	411	4547	411	-4547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGTGAGTCCAGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	85806964	85806210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85806337_85806417_85806467_85806748_85806855_85806941
ENSMUSG00000005150.17_85806324_85807012_1	chr8	-	239	4	ISM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	363	4660	363	-4660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTCCGATGTTGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	85807012	85806323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85806337_85806417_85806467_85806748_85806855_85806941
ENSMUSG00000005161.16_85696240_85701289_1	chr8	+	1326	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	0	174	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	85696239	85701289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ENSMUSG00000005161.16_85696377_85701463_1	chr8	+	1363	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	137	0	-19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTAGGCTCTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	85696376	85701463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ENSMUSG00000005161.16_85696868_85700940_1	chr8	+	695	4	FSM	ENSMUSG00000005161.16	ENST00000334482.9	698	4	5	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAAGTCTGTGTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	85696867	85700940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85696974_85697064_85697219_85697915_85698039_85700628
ENSMUSG00000005161.16_85696868_85701463_1	chr8	+	1344	5	NNC	ENSMUSG00000005161.16	novel	1175	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTAGGCTCTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	85696867	85701463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_85696974_85697069_85697219_85697915_85698039_85698190_85698322_85700628
ENSMUSG00000005202.3_69505824_69507991_1	chr11	-	465	4	ISM	ENSMUSG00000005202.3	ENST00000441599.6	794	6	655	-1	420	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCAACGATACCCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	69507991	69505823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69505943_69507162_69507323_69507517_69507680_69507967
ENSMUSG00000005202.3_69505824_69508157_1	chr11	-	306	2	NNC	ENSMUSG00000005202.3	novel	400	3	NA	NA	254	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCAACGATACCCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	69508157	69505823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_69505940_69507967
ENSMUSG00000005202.3_69505824_69508157_2	chr11	-	768	5	ISM	ENSMUSG00000005202.3	ENST00000574539.5	859	6	254	-1	254	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCAACGATACCCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	69508157	69505823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69505943_69506857_69506995_69507162_69507323_69507517_69507680_69507967
ENSMUSG00000005202.3_69505824_69508355_1	chr11	-	345	3	FSM	ENSMUSG00000005202.3	ENST00000572182.5	400	3	56	-1	56	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCAACGATACCCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	69508355	69505823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69505943_69507967_69508158_69508319
ENSMUSG00000005202.3_69505861_69508046_1	chr11	-	458	4	ISM	ENSMUSG00000005202.3	ENST00000576728.5	697	5	365	36	365	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGGACATCTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	69508046	69505860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69505943_69506857_69506995_69507162_69507323_69507967
ENSMUSG00000005202.3_69505898_69508018_1	chr11	-	418	4	ISM	ENSMUSG00000005202.3	ENST00000441599.6	794	6	628	73	393	-73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGACAGAGACTGGACATA	NA	NA	NA	NA	NA	NA	NA	NA	69508018	69505897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69505943_69507162_69507323_69507517_69507680_69507967
ENSMUSG00000005202.3_69505922_69508138_1	chr11	-	514	4	ISM	ENSMUSG00000005202.3	ENST00000441599.6	794	6	508	97	273	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTGAGTGACTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	69508138	69505921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69505943_69507162_69507323_69507517_69507680_69507967
ENSMUSG00000005202.3_69506857_69508355_1	chr11	-	524	4	ISM	ENSMUSG00000005202.3	ENST00000576728.5	697	5	56	1032	56	-1032	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGGACAGGGTCGGATG	NA	NA	NA	NA	NA	NA	NA	NA	69508355	69506856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69506995_69507162_69507323_69507967_69508158_69508319
ENSMUSG00000005202.3_69506857_69508355_2	chr11	-	686	5	ISM	ENSMUSG00000005202.3	ENST00000574539.5	859	6	56	1032	56	-1032	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGGACAGGGTCGGATG	NA	NA	NA	NA	NA	NA	NA	NA	69508355	69506856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69506995_69507162_69507323_69507517_69507680_69507967_69508158_69508319
ENSMUSG00000005202.3_69507569_69508608_1	chr11	-	427	4	ISM	ENSMUSG00000005202.3	ENST00000441599.6	794	6	38	1744	38	-1744	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGCACTAGGGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	69508608	69507568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69507680_69507967_69508158_69508319_69508412_69508574
ENSMUSG00000005204.13_69564167_69572672_1	chr11	-	2087	11	FSM	ENSMUSG00000005204.13	ENSMUST00000005336.9	2313	11	0	226	0	-220	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAAAAGCAAGCCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	69572672	69564166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ENSMUSG00000005233.17_69024239_69036538_1	chr2	-	1347	7	NNC	ENSMUSG00000005233.17	novel	1352	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	69036538	69024238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035261_69035369_69035523_69036407
ENSMUSG00000005262.14_18631044_18653154_1	chr16	+	1139	12	FSM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	0	857	0	64	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTGTTTAAAGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	18631043	18653154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ENSMUSG00000005262.14_18633666_18653310_1	chr16	+	1085	11	ISM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	2622	701	87	220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAGCAGAGCAGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	18633665	18653310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ENSMUSG00000005262.14_18639819_18653553_1	chr16	+	1096	8	ISM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	8775	458	6240	-453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGTAACGTGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	18639818	18653553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ENSMUSG00000005262.14_18639877_18653605_1	chr16	+	1090	8	ISM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	8833	406	6298	-401	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTGGCTTTTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	18639876	18653605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ENSMUSG00000005262.14_18644546_18653886_1	chr16	+	1143	5	ISM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	13502	125	10967	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTCAGATCTGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	18644545	18653886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ENSMUSG00000005262.14_18645811_18654006_1	chr16	+	1149	3	ISM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	14767	5	12232	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGTTTGATATGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	18645810	18654006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18645857_18646385_18646468_18652985
ENSMUSG00000005268.21_10317652_10329244_1	chr15	+	1050	8	NNC	ENSMUSG00000005268.21	novel	1225	8	NA	NA	64	-109	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAGAAAGATCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	10317651	10329244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_10317722_10319260_10319431_10322471_10322642_10325356_10325499_10325952_10326053_10326561_10326632_10328366_10328521_10329070
ENSMUSG00000005268.21_10317652_10329244_2	chr15	+	1049	8	NNC	ENSMUSG00000005268.21	novel	1225	8	NA	NA	64	-109	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAGAAAGATCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	10317651	10329244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_10317722_10319260_10319431_10322471_10322642_10325356_10325499_10325952_10326053_10326561_10326632_10328366_10328515_10329065
ENSMUSG00000005268.21_10317652_10329244_3	chr15	+	1052	8	FSM	ENSMUSG00000005268.21	ENST00000619676.4	1225	8	64	109	64	-109	multi-exon	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAGAAAGATCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	10317651	10329244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_10317722_10319260_10319431_10322471_10322642_10325356_10325499_10325952_10326053_10326561_10326632_10328366_10328521_10329068
ENSMUSG00000005268.21_10319260_10329353_1	chr15	+	1092	7	ISM	ENSMUSG00000005268.21	ENST00000619676.4	1225	8	1672	0	1672	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTAGACTTATGGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	10319259	10329353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_10319431_10322471_10322642_10325356_10325499_10325952_10326053_10326561_10326632_10328366_10328521_10329068
ENSMUSG00000005268.21_10319324_10329353_2	chr15	+	1028	7	ISM	ENSMUSG00000005268.21	ENST00000619676.4	1225	8	1736	0	1736	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTAGACTTATGGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	10319323	10329353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_10319431_10322471_10322642_10325356_10325499_10325952_10326053_10326561_10326632_10328366_10328521_10329068
ENSMUSG00000005268.21_10319324_10329353_3	chr15	+	1025	7	NNC	ENSMUSG00000005268.21	novel	1225	8	NA	NA	1736	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTAGACTTATGGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	10319323	10329353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_10319431_10322471_10322642_10325356_10325499_10325952_10326053_10326561_10326632_10328366_10328515_10329065
ENSMUSG00000005299.7_33897017_33901062_1	chr5	-	3017	2	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	39099	0	39019	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTACAGTGGTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	33901062	33897016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33899957_33900985
ENSMUSG00000005299.7_33897235_33902432_1	chr5	-	2934	3	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	37729	218	37649	-218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGCCTTGGTTCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	33902432	33897234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33899957_33900985_33901125_33902359
ENSMUSG00000005299.7_33897383_33903626_1	chr5	-	2944	4	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	36535	366	36455	-366	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGCAATCTATTCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	33903626	33897382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583
ENSMUSG00000005299.7_33897494_33904774_1	chr5	-	2980	5	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	35387	477	35307	-477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAAGTTCTATACCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	33904774	33897493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719
ENSMUSG00000005299.7_33897646_33905545_1	chr5	-	2949	6	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	34616	629	34536	-629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAACCACCTTCCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	33905545	33897645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504
ENSMUSG00000005299.7_33897788_33906137_1	chr5	-	2959	7	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	34024	771	33944	-771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTGAAAGCTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	33906137	33897787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085
ENSMUSG00000005299.7_33897907_33909870_1	chr5	-	2955	8	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	30291	890	30211	-890	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCAGGTGGACAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	33909870	33897906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835
ENSMUSG00000005299.7_33898121_33918186_1	chr5	-	2946	9	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	21975	1104	21895	-1104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCACTCTGGACTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	33918186	33898120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066
ENSMUSG00000005299.7_33898228_33918982_1	chr5	-	2982	10	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	21179	1211	21099	-1211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCCTGTGTCTGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	33918982	33898227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923
ENSMUSG00000005299.7_33898367_33919850_1	chr5	-	2970	11	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	20311	1350	20231	-1350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGTGCATAGTAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	33919850	33898366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802
ENSMUSG00000005299.7_33898438_33919889_1	chr5	-	2938	11	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	20272	1421	20192	-1421	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAAACTTCTTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	33919889	33898437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802
ENSMUSG00000005299.7_33898490_33919946_1	chr5	-	2943	11	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	20215	1473	20135	-1473	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCTGGAACATGTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	33919946	33898489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802
ENSMUSG00000005299.7_33898859_33927155_1	chr5	-	3025	12	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	13006	1842	12926	-1842	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCACAAGGGAATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	33927155	33898858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704
ENSMUSG00000005299.7_33899057_33939867_1	chr5	-	2938	14	FSM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	294	2040	214	-2040	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATGAGTAATTCCTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	33939867	33899056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ENSMUSG00000005299.7_33899117_33939920_1	chr5	-	2931	14	FSM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	241	2100	161	-2100	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACTTAATAATTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	33939920	33899116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ENSMUSG00000005299.7_33899170_33940058_1	chr5	-	3016	14	FSM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	103	2153	23	-2153	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGATTCCGAGACATG	NA	NA	NA	NA	NA	NA	NA	NA	33940058	33899169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ENSMUSG00000005312.16_58324531_58331138_1	chr13	-	1737	4	ISM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	32295	554	32295	-554	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAGTACGTTTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	58331138	58324530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995
ENSMUSG00000005312.16_58324606_58331138_1	chr13	-	1662	4	ISM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	32295	629	32295	-629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGGCAATTAAGATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58331138	58324605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995
ENSMUSG00000005312.16_58324762_58339638_1	chr13	-	1609	5	ISM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	23795	785	23795	-785	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGATTTTAAATGATTAGT	NA	NA	NA	NA	NA	NA	NA	NA	58339638	58324761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535
ENSMUSG00000005312.16_58324848_58339734_1	chr13	-	1619	5	ISM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	23699	871	23699	-871	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGCGGATGTTTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	58339734	58324847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535
ENSMUSG00000005312.16_58324958_58328703_1	chr13	-	1235	4	ISM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	34764	988	34730	-981	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCGACTGGAGGAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	58328703	58324957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635
ENSMUSG00000005312.16_58325142_58331138_1	chr13	-	1210	5	ISM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	32329	1172	32295	-1165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCCTAATTGTGTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	58331138	58325141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995
ENSMUSG00000005312.16_58325142_58340049_1	chr13	-	1529	6	ISM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	23384	1165	23384	-1165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCCTAATTGTGTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	58340049	58325141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890
ENSMUSG00000005312.16_58325333_58339954_1	chr13	-	1327	7	ISM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	23513	1363	23479	-1356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGATCATTTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	58339954	58325332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890
ENSMUSG00000005312.16_58325333_58344446_1	chr13	-	1677	8	ISM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	18987	1356	18987	-1356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGATCATTTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	58344446	58325332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370
ENSMUSG00000005312.16_58325470_58339998_1	chr13	-	1234	7	ISM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	23469	1500	23435	-1493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGCATTTATTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	58339998	58325469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890
ENSMUSG00000005312.16_58325524_58340049_1	chr13	-	1231	7	ISM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	23418	1554	23384	-1547	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACAGTGGGAATCAATG	NA	NA	NA	NA	NA	NA	NA	NA	58340049	58325523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890
ENSMUSG00000005312.16_58325631_58341228_1	chr13	-	1287	8	ISM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	22239	1661	22205	-1654	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACATGCTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	58341228	58325630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065
ENSMUSG00000005312.16_58325631_58363170_1	chr13	-	1644	10	FSM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	263	1654	263	-1654	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACATGCTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	58363170	58325630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ENSMUSG00000005312.16_58325741_58341294_1	chr13	-	1243	8	ISM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	22173	1771	22139	-1764	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCGACATCAATGCAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	58341294	58325740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065
ENSMUSG00000005312.16_58325765_58363256_1	chr13	-	1596	10	FSM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	177	1788	177	-1788	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAAGCTCTGATAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	58363256	58325764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ENSMUSG00000005312.16_58325819_58363322_1	chr13	-	1608	10	FSM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	111	1842	111	-1842	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCAACAACTGGAACAACT	NA	NA	NA	NA	NA	NA	NA	NA	58363322	58325818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ENSMUSG00000005312.16_58327042_58344486_1	chr13	-	1291	8	ISM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	18981	3072	18947	-3065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACGATGCGTTTCTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	58344486	58327041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370
ENSMUSG00000005312.16_58327042_58363433_1	chr13	-	1695	9	ISM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	0	3065	0	-3065	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACGATGCGTTTCTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	58363433	58327041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ENSMUSG00000005312.16_58327144_58346780_1	chr13	-	1237	9	ISM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	16687	3174	16653	-3167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCTAGTGAAGATACGAA	NA	NA	NA	NA	NA	NA	NA	NA	58346780	58327143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732
ENSMUSG00000005312.16_58327440_58363131_1	chr13	-	1238	9	ISM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	336	3470	302	-3463	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCAGGCGCTGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	58363131	58327439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ENSMUSG00000005320.10_55309212_55316572_1	chr13	+	1737	9	ISM	ENSMUSG00000005320.10	ENSMUST00000005452.6	3324	18	8759	0	8759	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTGTGGCAGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	55309211	55316572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55309353_55309434_55309557_55313702_55313814_55313908_55314100_55314670_55314794_55314900_55314972_55315212_55315351_55315618_55315725_55315838
ENSMUSG00000005354.17_77799410_77808799_1	chr15	-	705	2	ISM	ENSMUSG00000005354.17	ENSMUST00000109748.9	2049	3	4369	0	4369	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTACCTCTTGCTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	77808799	77799409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77800058_77808742
ENSMUSG00000005354.17_77799512_77811935_1	chr15	-	714	3	FSM	ENSMUSG00000005354.17	ENSMUST00000109748.9	2049	3	1233	102	1233	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCCTCTGCTTGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	77811935	77799511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_77800058_77808742_77808867_77811891
ENSMUSG00000005354.17_77799595_77812078_1	chr15	-	774	3	FSM	ENSMUSG00000005354.17	ENSMUST00000109748.9	2049	3	1090	185	1090	-185	multi-exon	FALSE	canonical	NA	NA	NA	NA	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCACTAGTGGTCGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	77812078	77799594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_77800058_77808742_77808867_77811891
ENSMUSG00000005354.17_77799795_77813168_1	chr15	-	712	4	FSM	ENSMUSG00000005354.17	ENSMUST00000005487.12	1298	4	38	548	0	-385	multi-exon	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTAAGAGCCACCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	77813168	77799794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_77800058_77808742_77808867_77811891_77812155_77813106
ENSMUSG00000005355.10_78549167_78550823_1	chr10	-	380	4	ISM	ENSMUSG00000005355.10	ENST00000427043.4	702	5	423	-1	423	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGCAGGGATGGCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	78550823	78549166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_78549276_78549823_78549928_78550081_78550194_78550768
ENSMUSG00000005355.10_78549824_78550996_1	chr10	-	444	3	ISM	ENSMUSG00000005355.10	ENST00000427043.4	702	5	250	656	250	-656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCCAGATGAAGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	78550996	78549823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_78549928_78550081_78550194_78550768
ENSMUSG00000005355.10_78549893_78551142_1	chr10	-	421	4	ISM	ENSMUSG00000005355.10	ENST00000427043.4	702	5	104	725	104	-725	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	839	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTCATCCAGACCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	78551142	78549892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_78549928_78550081_78550194_78550768_78550995_78551094
ENSMUSG00000005355.10_78550081_78551208_1	chr10	-	453	3	ISM	ENSMUSG00000005355.10	ENST00000427043.4	702	5	38	913	38	-913	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	933	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGCTCTCAGATGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	78551208	78550080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_78550194_78550768_78550995_78551094
ENSMUSG00000005355.10_78550081_78551208_2	chr10	-	446	3	NNC	ENSMUSG00000005355.10	novel	702	5	NA	NA	38	-913	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGCTCTCAGATGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	78551208	78550080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_78550187_78550768_78550995_78551094
ENSMUSG00000005357.10_78623627_78631995_1	chr10	+	791	5	NNC	ENSMUSG00000005357.10	novel	946	6	NA	NA	1546	-112	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGGCTGGTCATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	78623626	78631995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_78623799_78624792_78624931_78626998_78627199_78629123_78629167_78631757
ENSMUSG00000005357.10_78623633_78632012_1	chr10	+	801	5	NNC	ENSMUSG00000005357.10	novel	946	6	NA	NA	1552	-95	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGGCATGAAGCACAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	78623632	78632012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_78623799_78624792_78624931_78626998_78627204_78629123_78629167_78631763
ENSMUSG00000005357.10_78623647_78632004_1	chr10	+	785	5	ISM	ENSMUSG00000005357.10	ENST00000598504.5	946	6	1566	103	1566	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCATTGGTGGCATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	78623646	78632004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_78623799_78624792_78624931_78626998_78627204_78629123_78629167_78631757
ENSMUSG00000005357.10_78623677_78632107_1	chr10	+	852	5	NNC	ENSMUSG00000005357.10	novel	946	6	NA	NA	1596	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGTGAGTCCCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	78623676	78632107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_78623799_78624792_78624931_78626998_78627204_78629123_78629167_78631763
ENSMUSG00000005357.10_78623768_78632107_1	chr10	+	762	5	NNC	ENSMUSG00000005357.10	novel	946	6	NA	NA	1687	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGTGAGTCCCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	78623767	78632107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_78623799_78624792_78624931_78626998_78627199_78629123_78629167_78631757
ENSMUSG00000005357.10_78624792_78632107_1	chr10	+	737	4	ISM	ENSMUSG00000005357.10	ENST00000598504.5	946	6	2711	0	2711	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGTGAGTCCCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	78624791	78632107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_78624931_78626998_78627204_78629123_78629167_78631757
ENSMUSG00000005360.15_8664729_8668588_1	chr15	-	1144	2	ISM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	71660	1121	71305	-1121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTCAATTAGATGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	8668588	8664728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_8665824_8668539
ENSMUSG00000005360.15_8664879_8671802_1	chr15	-	1217	3	ISM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	68446	1271	68091	-1271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGCTCACTAGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	8671802	8664878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_8665824_8668539_8668675_8671665
ENSMUSG00000005360.15_8665196_8672566_1	chr15	-	1141	4	ISM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	67682	1588	67327	-1588	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGTTACCCATTGAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	8672566	8665195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383
ENSMUSG00000005360.15_8665261_8672617_1	chr15	-	1127	4	ISM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	67631	1653	67276	-1653	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAAAAATCCTTCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	8672617	8665260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383
ENSMUSG00000005360.15_8665389_8675292_1	chr15	-	1148	5	ISM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	64956	1781	64601	-1781	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATCAAACACAGTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	8675292	8665388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143
ENSMUSG00000005360.15_8665524_8675429_1	chr15	-	1150	5	ISM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	64819	1916	64464	-1916	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTCCCTACTCTGATA	NA	NA	NA	NA	NA	NA	NA	NA	8675429	8665523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143
ENSMUSG00000005360.15_8665655_8680407_1	chr15	-	1144	7	ISM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	59841	2047	59486	-2047	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGAGAAACCCGTGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	8680407	8665654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332
ENSMUSG00000005360.15_8665765_8680527_1	chr15	-	1154	7	ISM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	59721	2157	59366	-2157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTTGTCCCGACATGAA	NA	NA	NA	NA	NA	NA	NA	NA	8680527	8665764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332
ENSMUSG00000005360.15_8668594_8717863_1	chr15	-	1143	7	ISM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	22385	4986	22030	-4986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGCCTGCCCACAGATG	NA	NA	NA	NA	NA	NA	NA	NA	8717863	8668593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771
ENSMUSG00000005360.15_8671740_8738150_1	chr15	-	1139	7	ISM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	2098	8132	1743	-8132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTGGCTGCCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	8738150	8671739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045
ENSMUSG00000005360.15_8671740_8738221_1	chr15	-	1210	7	ISM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	2027	8132	1672	-8132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTGGCTGCCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	8738221	8671739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045
ENSMUSG00000005360.15_8672535_8739923_1	chr15	-	1141	7	ISM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	325	8927	-30	-8927	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTACACCGTGACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	8739923	8672534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8739822
ENSMUSG00000005360.15_8675179_8740043_1	chr15	-	1143	6	ISM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	205	11571	-150	-11571	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCATCATGCGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	8740043	8675178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8739822
ENSMUSG00000005360.15_8675308_8740248_1	chr15	-	1219	6	ISM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	0	11700	0	-11700	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTGCCTGGATCTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	8740248	8675307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8739822
ENSMUSG00000005360.15_8715500_8738200_1	chr15	-	534	4	ISM	ENSMUSG00000005360.15	ENSMUST00000157065.2	728	5	1693	0	1693	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGACTTTCCTTTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	8738200	8715499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_8715639_8717194_8717297_8717771_8717910_8738045
ENSMUSG00000005362.15_106757162_106758705_1	chr6	-	952	2	ISM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	18321	0	18321	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCTCCTTAATGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	106758705	106757161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_106758072_106758663
ENSMUSG00000005362.15_106757435_106759908_1	chr6	-	871	4	ISM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	17118	273	17118	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGAGCAGAAATAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	106759908	106757434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871
ENSMUSG00000005362.15_106757693_106767844_1	chr6	-	892	7	ISM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	9182	531	9182	-531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATCCTGTTGAGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	106767844	106757692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792
ENSMUSG00000005362.15_106757754_106767890_1	chr6	-	877	7	ISM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	9136	592	9136	-592	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGTATAAAACATAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	106767890	106757753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792
ENSMUSG00000005362.15_106757863_106771194_1	chr6	-	876	8	ISM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	5832	701	5832	-701	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTTCCTCAAGTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	106771194	106757862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148
ENSMUSG00000005362.15_106757901_106771268_1	chr6	-	912	8	ISM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	5758	739	5758	-739	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATAAGTGCACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	106771268	106757900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148
ENSMUSG00000005362.15_106757970_106771298_1	chr6	-	873	8	ISM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	5728	808	5728	-808	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCGCTCTGCTCTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	106771298	106757969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148
ENSMUSG00000005362.15_106758691_106772104_1	chr6	-	893	8	ISM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	4922	1529	4922	-1529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACAGTGCACAGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	106772104	106758690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955
ENSMUSG00000005362.15_106758759_106772158_1	chr6	-	879	8	ISM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	4868	1597	4868	-1597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCATGGATATGTACATGA	NA	NA	NA	NA	NA	NA	NA	NA	106772158	106758758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955
ENSMUSG00000005362.15_106759928_106777022_1	chr6	-	908	8	ISM	ENSMUSG00000005362.15	ENSMUST00000113239.10	2084	11	13	2766	4	-2766	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATCGGCAGTGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	106777022	106759927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
ENSMUSG00000005370.5_88282523_88292418_1	chr17	+	1219	4	FSM	ENSMUSG00000005370.5	ENST00000616033.4	3167	4	-54	2002	30	-2002	multi-exon	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACCACACTGTATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	88282522	88292418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_88282823_88287618_88287819_88290872_88291047_88291873
ENSMUSG00000005370.5_88282523_88292471_1	chr17	+	1272	4	FSM	ENSMUSG00000005370.5	ENST00000616033.4	3167	4	-54	1949	30	-1949	multi-exon	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAAGTGGTGGCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	88282522	88292471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_88282823_88287618_88287819_88290872_88291047_88291873
ENSMUSG00000005370.5_88282648_88292526_1	chr17	+	1202	4	FSM	ENSMUSG00000005370.5	ENST00000616033.4	3167	4	71	1894	71	-1894	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGGAAGTTTTATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	88282647	88292526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_88282823_88287618_88287819_88290872_88291047_88291873
ENSMUSG00000005370.5_88287649_88293836_1	chr17	+	2298	3	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	27	4475	27	-584	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGTAAAGTCTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	88287648	88293836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88287819_88290872_88291047_88291882
ENSMUSG00000005370.5_88287685_88293916_1	chr17	+	2342	3	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	63	4395	63	-504	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTCAAAAAGTCCTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	88287684	88293916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88287819_88290872_88291047_88291882
ENSMUSG00000005370.5_88287728_88293983_1	chr17	+	2366	3	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	106	4328	106	-437	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACCATGAGAAGGCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	88287727	88293983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88287819_88290872_88291047_88291882
ENSMUSG00000005370.5_88290930_88294088_1	chr17	+	2323	2	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	3308	4223	3308	-332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGGAGTACTTAGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	88290929	88294088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88291047_88291882
ENSMUSG00000005370.5_88290984_88294150_1	chr17	+	2331	2	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	3362	4161	3362	-270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGGTAGGAACCGTTACCA	NA	NA	NA	NA	NA	NA	NA	NA	88290983	88294150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88291047_88291882
ENSMUSG00000005370.5_88292601_88297664_1	chr17	+	2329	5	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	4979	647	4979	-647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGTTAAAGAACTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	88292600	88297664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621
ENSMUSG00000005370.5_88292653_88297721_1	chr17	+	2334	5	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	5031	590	5031	-590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTCATTAGTAGAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	88292652	88297721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621
ENSMUSG00000005370.5_88292769_88297913_1	chr17	+	2328	6	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	5147	398	5147	-398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATAAATTCATTAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	88292768	88297913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858
ENSMUSG00000005370.5_88293007_88298320_1	chr17	+	2404	7	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	5385	-9	5385	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88293006	88298320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ENSMUSG00000005370.5_88293076_88298320_1	chr17	+	2335	7	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	5454	-9	5454	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88293075	88298320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ENSMUSG00000005370.5_88294200_88298320_1	chr17	+	1211	7	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	6578	-9	6578	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88294199	88298320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ENSMUSG00000005370.5_88295772_88297726_1	chr17	+	424	4	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	8150	585	8150	-585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAGTAGAAGATTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	88295771	88297726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88295883_88296571_88296690_88296854_88296945_88297621
ENSMUSG00000005370.5_88297693_88298320_1	chr17	+	453	3	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	10071	-9	10071	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88297692	88298320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88297777_88297858_88298059_88298151
ENSMUSG00000005370.5_88297760_88298320_1	chr17	+	386	3	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	10138	-9	10138	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88297759	88298320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88297777_88297858_88298059_88298151
ENSMUSG00000005378.18_135081813_135093505_1	chr5	-	1491	13	NNC	ENSMUSG00000005378.18	novel	1516	13	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	135093505	135081812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092745_135092776_135092867_135093030_135093377
ENSMUSG00000005378.18_135081813_135093505_3	chr5	-	1492	13	NNC	ENSMUSG00000005378.18	novel	1516	13	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	135093505	135081812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_135082279_135082402_135082493_135084888_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092737_135092776_135092867_135093030_135093377
ENSMUSG00000005378.18_135081813_135093505_5	chr5	-	1493	13	NNC	ENSMUSG00000005378.18	novel	1516	13	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	135093505	135081812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085776_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092737_135092776_135092867_135093030_135093377
ENSMUSG00000005397.9_13612360_13663697_1	chr13	+	2282	11	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	224	23157	224	-23157	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTGCCTGGCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	13612359	13663697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590
ENSMUSG00000005397.9_13638357_13674189_1	chr13	+	2292	12	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	26221	12665	26221	-12665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCCGGCGGGGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	13638356	13674189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143
ENSMUSG00000005397.9_13638480_13674305_1	chr13	+	2285	12	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	26344	12549	26344	-12549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTGGACCGAGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	13638479	13674305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143
ENSMUSG00000005397.9_13639953_13675144_1	chr13	+	2280	12	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	27817	11710	27817	-11710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCCTGGAGAGAAACACC	NA	NA	NA	NA	NA	NA	NA	NA	13639952	13675144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030
ENSMUSG00000005397.9_13642897_13680987_1	chr13	+	2283	13	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	30761	5867	30761	-5867	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGATCGAATAGAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	13642896	13680987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920
ENSMUSG00000005397.9_13647414_13683385_1	chr13	+	2284	14	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	35278	3469	35278	-3469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGCTATGGGAAGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	13647413	13683385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302
ENSMUSG00000005397.9_13650870_13684606_1	chr13	+	2287	15	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	38734	2248	38734	-2248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCTGACAACACCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	13650869	13684606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ENSMUSG00000005397.9_13652865_13684933_1	chr13	+	2346	14	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	40729	1921	40729	-1921	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGGTAGTGGTACATGC	NA	NA	NA	NA	NA	NA	NA	NA	13652864	13684933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ENSMUSG00000005397.9_13661264_13685356_1	chr13	+	2280	11	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	49128	1498	49128	-1498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATTCCAGGGATTCATG	NA	NA	NA	NA	NA	NA	NA	NA	13661263	13685356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ENSMUSG00000005397.9_13664687_13685645_1	chr13	+	2276	9	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	52551	1209	52551	-1209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAGAGTCATCTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	13664686	13685645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ENSMUSG00000005397.9_13675082_13685997_1	chr13	+	2283	7	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	62946	857	62946	-857	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATTTGTTCTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	13675081	13685997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ENSMUSG00000005397.9_13677012_13686190_1	chr13	+	2326	6	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	64876	664	64876	-664	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATGGTGTAAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	13677011	13686190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ENSMUSG00000005397.9_13680969_13686297_1	chr13	+	2286	5	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	68833	557	68833	-557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGGCTTAAAGGCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	13680968	13686297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ENSMUSG00000005397.9_13681039_13686360_1	chr13	+	2279	5	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	68903	494	68903	-494	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAAAGAATGTTTATCCT	NA	NA	NA	NA	NA	NA	NA	NA	13681038	13686360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ENSMUSG00000005397.9_13682303_13686522_1	chr13	+	2279	4	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	70167	332	70167	-332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGGAGGGAGTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	13682302	13686522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13682353_13683302_13683427_13684017_13684131_13684530
ENSMUSG00000005397.9_13684037_13686750_1	chr13	+	2314	2	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	71901	104	71901	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGATGTATACAAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	13684036	13686750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13684131_13684530
ENSMUSG00000005410.7_75836977_75840892_1	chr8	+	353	3	ISM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	725	13424	725	-13424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATGCAGTCCCTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	75836976	75840892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_75837057_75839171_75839345_75840792
ENSMUSG00000005410.7_75839170_75848342_1	chr8	+	1169	8	ISM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	2918	5974	2918	-5974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTCTCGGGCTAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	75839169	75848342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165
ENSMUSG00000005410.7_75840851_75850519_1	chr8	+	1100	9	ISM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	4599	3797	4599	-3797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATCATCATGCGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	75840850	75850519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468
ENSMUSG00000005410.7_75848166_75854317_1	chr8	+	1157	6	ISM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	11914	-1	11914	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGTAGTGCTGTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	75848165	75854317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ENSMUSG00000005410.7_75851428_75853957_1	chr8	+	379	3	ISM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	15176	359	15176	-359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCCATCAACCCTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	75851427	75853957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_75851572_75852864_75852993_75853850
ENSMUSG00000005413.9_75820249_75826725_1	chr8	+	1077	5	FSM	ENSMUSG00000005413.9	ENSMUST00000005548.8	1569	5	0	492	0	-492	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTCTTGGGCCTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	75820248	75826725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_75820401_75822483_75822605_75823477_75823970_75825393_75825494_75826513
ENSMUSG00000005413.9_75820249_75826788_1	chr8	+	1140	5	FSM	ENSMUSG00000005413.9	ENSMUST00000005548.8	1569	5	0	429	0	-429	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGGAATGGAGGGAGATA	NA	NA	NA	NA	NA	NA	NA	NA	75820248	75826788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_75820401_75822483_75822605_75823477_75823970_75825393_75825494_75826513
ENSMUSG00000005413.9_75822576_75826907_1	chr8	+	1015	4	ISM	ENSMUSG00000005413.9	ENSMUST00000005548.8	1569	5	2327	310	2327	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAGCTGTTCTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	75822575	75826907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_75822605_75823477_75823970_75825393_75825494_75826513
ENSMUSG00000005413.9_75823656_75827218_1	chr8	+	1119	3	ISM	ENSMUSG00000005413.9	ENSMUST00000005548.8	1569	5	3407	-1	3407	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAAGTGCATTCATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	75823655	75827218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_75823970_75825393_75825494_75826513
ENSMUSG00000005417.18_59553461_59635638_1	chr11	+	1341	11	ISM	ENSMUSG00000005417.18	ENSMUST00000108751.8	4021	24	128	31411	61	-31411	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGGAGGTGAGAACACTA	NA	NA	NA	NA	NA	NA	NA	NA	59553460	59635638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626769_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577
ENSMUSG00000005417.18_59553628_59626835_1	chr11	+	708	6	ISM	ENSMUSG00000005417.18	ENST00000651222.2	8184	24	228	40238	228	-40214	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGCCTCCTGCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	59553627	59626835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655
ENSMUSG00000005417.18_59553680_59643353_1	chr11	+	1368	14	ISM	ENSMUSG00000005417.18	ENSMUST00000108751.8	4021	24	347	23696	280	-23696	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTGCTCAAGGTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	59553679	59643353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626769_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315
ENSMUSG00000005417.18_59586987_59643464_1	chr11	+	1349	13	ISM	ENSMUSG00000005417.18	ENSMUST00000108751.8	4021	24	33654	23585	33587	-23585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTGGGCTGAATTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	59586986	59643464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626769_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315
ENSMUSG00000005417.18_59618402_59643664_1	chr11	+	1416	11	ISM	ENSMUSG00000005417.18	ENSMUST00000108751.8	4021	24	65069	23385	65002	-23385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCCTACGTATGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	59618401	59643664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59618530_59622333_59622419_59626769_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315
ENSMUSG00000005417.18_59618507_59643688_1	chr11	+	1335	11	ISM	ENSMUSG00000005417.18	ENSMUST00000108751.8	4021	24	65174	23361	65107	-23361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGCCCAGGGCTGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	59618506	59643688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59618530_59622333_59622419_59626769_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315
ENSMUSG00000005417.18_59627910_59645918_1	chr11	+	1392	9	ISM	ENSMUSG00000005417.18	ENSMUST00000108751.8	4021	24	74577	21131	74510	-21131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTATGTGCTGCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	59627909	59645918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818
ENSMUSG00000005417.18_59643489_59662478_1	chr11	+	1347	9	ISM	ENSMUSG00000005417.18	ENSMUST00000108751.8	4021	24	90156	4571	90089	-4571	internal_fragment	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGACAGATCCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	59643488	59662478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442
ENSMUSG00000005417.18_59643737_59666473_1	chr11	+	1347	11	ISM	ENSMUSG00000005417.18	ENSMUST00000108751.8	4021	24	90404	576	90337	-576	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATCTTCACCTGTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	59643736	59666473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ENSMUSG00000005417.18_59643814_59666580_1	chr11	+	1377	11	ISM	ENSMUSG00000005417.18	ENSMUST00000108751.8	4021	24	90481	469	90414	-469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTTGTCTTTATCACA	NA	NA	NA	NA	NA	NA	NA	NA	59643813	59666580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ENSMUSG00000005417.18_59657591_59667049_1	chr11	+	1353	7	ISM	ENSMUSG00000005417.18	ENSMUST00000108751.8	4021	24	104258	0	104191	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGCCCCTCTCATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	59657590	59667049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ENSMUSG00000005442.14_24982235_24992506_1	chr7	+	2122	12	FSM	ENSMUSG00000005442.14	ENST00000629111.1	2082	12	-40	0	-40	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGTCAGGAAGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	24982234	24992506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_24982342_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985353_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24987896_24992074_24992213_24992392
ENSMUSG00000005442.14_24984352_24992506_1	chr7	+	1965	11	FSM	ENSMUSG00000005442.14	ENST00000605013.1	1983	11	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGTCAGGAAGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	24984351	24992506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985353_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24987930_24992086_24992207_24992380
ENSMUSG00000005442.14_24984352_24992506_2	chr7	+	1960	11	NNC	ENSMUSG00000005442.14	novel	2044	11	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGTCAGGAAGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	24984351	24992506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985353_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24987925_24992086_24992207_24992380
ENSMUSG00000005442.14_24984352_24992506_3	chr7	+	1966	11	NNC	ENSMUSG00000005442.14	novel	2044	11	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGTCAGGAAGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	24984351	24992506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985353_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24987925_24992080_24992207_24992380
ENSMUSG00000005442.14_24984352_24992506_4	chr7	+	2020	11	FSM	ENSMUSG00000005442.14	ENST00000455800.1	2098	11	78	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGTCAGGAAGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	24984351	24992506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985353_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24987896_24991997_24992207_24992380
ENSMUSG00000005442.14_24984849_24992506_1	chr7	+	1682	9	FSM	ENSMUSG00000005442.14	ENST00000444451.1	1684	9	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGTCAGGAAGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	24984848	24992506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_24984965_24985058_24985242_24985353_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24987956_24992074_24992207_24992380
ENSMUSG00000005442.14_24986624_24987743_1	chr7	+	477	3	ISM	ENSMUSG00000005442.14	ENST00000432801.1	1319	7	1730	152	1730	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCCCCACCCCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	24986623	24987743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24986752_24987174_24987279_24987498
ENSMUSG00000005442.14_24986661_24987810_1	chr7	+	507	3	ISM	ENSMUSG00000005442.14	ENST00000432801.1	1319	7	1767	85	1767	-85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGCCACCTTTCGGCG	NA	NA	NA	NA	NA	NA	NA	NA	24986660	24987810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24986752_24987174_24987279_24987498
ENSMUSG00000005442.14_24987874_24992129_1	chr7	+	154	2	ISM	ENSMUSG00000005442.14	ENST00000416803.1	1964	10	3601	68	2980	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGAGCTGCAGCTCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	24987873	24992129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24987896_24991997
ENSMUSG00000005442.14_24992189_24992506_1	chr7	+	144	2	ISM	ENSMUSG00000005442.14	ENST00000444451.1	1684	9	7342	0	7295	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGTCAGGAAGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	24992188	24992506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24992207_24992380
ENSMUSG00000005447.13_24994672_24995862_1	chr7	-	370	3	ISM	ENSMUSG00000005447.13	ENSMUST00000108410.8	689	5	875	198	875	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGATGGCACCATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	24995862	24994671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_24994802_24995545_24995669_24995745
ENSMUSG00000005447.13_24994784_24996600_1	chr7	-	348	4	ISM	ENSMUSG00000005447.13	ENSMUST00000108410.8	689	5	137	310	137	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACCCCAACCCACTTCG	NA	NA	NA	NA	NA	NA	NA	NA	24996600	24994783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510
ENSMUSG00000005447.13_24995610_24996843_1	chr7	-	308	4	NNC	ENSMUSG00000005447.13	novel	679	5	NA	NA	-106	-219	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATCAAAGCCATCGTAC	NA	NA	NA	NA	NA	NA	NA	NA	24996843	24995609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_24995669_24995745_24995863_24996515_24996601_24996796
ENSMUSG00000005447.13_24996511_24997411_1	chr7	-	333	3	ISM	ENSMUSG00000005447.13	ENSMUST00000155118.2	679	5	-49	1120	0	-1120	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGTCCACCCGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	24997411	24996510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_24996601_24996796_24996896_24997267
ENSMUSG00000005470.9_84682136_84696826_1	chr8	+	1782	4	NNC	ENSMUSG00000005470.9	novel	1788	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGCTTTTTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	84682135	84696826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_84682567_84691659_84691776_84694462_84694640_84695768
ENSMUSG00000005481.19_84441901_84448438_1	chr8	+	759	6	ISM	ENSMUSG00000005481.19	ENSMUST00000019576.15	1656	11	95	1539	0	-1539	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAGGAGATCCGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	84441900	84448438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362
ENSMUSG00000005481.19_84441901_84448913_1	chr8	+	857	7	ISM	ENSMUSG00000005481.19	ENSMUST00000019576.15	1656	11	95	1064	0	-1064	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTACGTCAAGCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	84441900	84448913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858
ENSMUSG00000005481.19_84446072_84448961_1	chr8	+	778	6	NNC	ENSMUSG00000005481.19	novel	1656	11	NA	NA	3895	-1016	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCTCGACGTGCTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	84446071	84448961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_84446228_84446445_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858
ENSMUSG00000005481.19_84446166_84449123_1	chr8	+	764	7	ISM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	3989	854	3989	-854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCCTAGTGGAGCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	84446165	84449123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077
ENSMUSG00000005481.19_84446506_84449335_1	chr8	+	759	7	ISM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	4329	642	4329	-642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	997	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGGCAGAGGTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	84446505	84449335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277
ENSMUSG00000005481.19_84447229_84449576_1	chr8	+	793	7	ISM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	5052	401	5052	-401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATGCCAAAATCCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	84447228	84449576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515
ENSMUSG00000005481.19_84447703_84449903_1	chr8	+	871	7	ISM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	5526	74	5526	-74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1547	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCATGGCTCCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	84447702	84449903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUSG00000005481.19_84447725_84449903_1	chr8	+	849	7	ISM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	5548	74	5548	-74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCATGGCTCCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	84447724	84449903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUSG00000005481.19_84447737_84449801_1	chr8	+	735	7	ISM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	5560	176	5560	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCCCACCTGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	84447736	84449801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUSG00000005483.11_84334822_84338989_1	chr8	+	2703	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	0	293	0	-293	multi-exon	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTTTTCTTCTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	84334821	84338989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_84335172_84336442_84337024_84337217
ENSMUSG00000005483.11_84334937_84339082_1	chr8	+	2681	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	115	200	115	-200	multi-exon	FALSE	canonical	NA	NA	NA	NA	1788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCCAGAGCCAGATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	84334936	84339082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_84335172_84336442_84337024_84337217
ENSMUSG00000005483.11_84336441_84339282_1	chr8	+	2648	2	ISM	ENSMUSG00000005483.11	ENSMUST00000212300.2	2854	3	1259	0	1259	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATACGAGGTGCTCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	84336440	84339282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84337024_84337217
ENSMUSG00000005501.15_87876251_87907808_1	chr1	-	1758	16	ISM	ENSMUSG00000005501.15	ENST00000450966.5	3587	29	27363	0	27363	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGGCTAGCTTTGGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	87907808	87876250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890243_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736
ENSMUSG00000005501.15_87877910_87909852_1	chr1	-	1771	16	ISM	ENSMUSG00000005501.15	ENST00000427112.6	3519	28	25319	256	25319	-256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGAGTGGCTTCCAATA	NA	NA	NA	NA	NA	NA	NA	NA	87909852	87877909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890243_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730
ENSMUSG00000005501.15_87878019_87911550_1	chr1	-	1787	17	ISM	ENSMUSG00000005501.15	ENST00000427112.6	3519	28	23621	365	23621	-365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGGACACCACCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	87911550	87878018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890243_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475
ENSMUSG00000005501.15_87880061_87913704_1	chr1	-	1737	16	ISM	ENSMUSG00000005501.15	ENST00000427112.6	3519	28	21467	2407	21467	-2407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTATCTCTGGATTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	87913704	87880060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890243_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623
ENSMUSG00000005501.15_87880113_87913756_1	chr1	-	1737	16	ISM	ENSMUSG00000005501.15	ENST00000427112.6	3519	28	21415	2459	21415	-2459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGCAAGCGCCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	87913756	87880112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890243_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623
ENSMUSG00000005501.15_87880150_87913856_1	chr1	-	1800	16	ISM	ENSMUSG00000005501.15	ENST00000427112.6	3519	28	21315	2496	21315	-2496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCAGTCCACAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	87913856	87880149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890243_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623
ENSMUSG00000005501.15_87890192_87921942_1	chr1	-	1745	15	ISM	ENSMUSG00000005501.15	ENST00000678225.1	3682	30	14316	13941	13229	-12538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGGATTGGTGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	87921942	87890191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87890243_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895
ENSMUSG00000005501.15_87895232_87923576_1	chr1	-	1833	14	ISM	ENSMUSG00000005501.15	ENST00000678225.1	3682	30	12682	18981	11595	-17578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACTACGGCCCAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	87923576	87895231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432
ENSMUSG00000005501.15_87903527_87925681_1	chr1	-	1782	12	ISM	ENSMUSG00000005501.15	ENST00000678225.1	3682	30	10577	27276	9490	-25873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGACTAACCTGGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	87925681	87903526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534
ENSMUSG00000005501.15_87906033_87927626_1	chr1	-	1820	12	ISM	ENSMUSG00000005501.15	ENST00000678225.1	3682	30	8632	29782	7545	-28379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACTCATTGAAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	87927626	87906032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461
ENSMUSG00000005501.15_87906228_87932031_1	chr1	-	1802	14	ISM	ENSMUSG00000005501.15	ENST00000678225.1	3682	30	4227	29977	3140	-28574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCAGAAGTGGGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	87932031	87906227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968
ENSMUSG00000005501.15_87909731_87936250_1	chr1	-	1832	13	ISM	ENSMUSG00000005501.15	ENST00000678225.1	3682	30	8	33480	6	-32077	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTTAACAGAAACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	87936250	87909730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ENSMUSG00000005505.13_90735113_90737923_1	chr2	+	794	3	ISM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	26	2982	26	-2982	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAGCTTGGATCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	90735112	90737923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_90735254_90736009_90736628_90737888
ENSMUSG00000005505.13_90736251_90739609_1	chr2	+	733	3	ISM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	1164	1296	1164	-1296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGACCGCCTCCAGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	90736250	90739609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_90736628_90737888_90737996_90739360
ENSMUSG00000005505.13_90736445_90739786_1	chr2	+	716	3	ISM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	1358	1119	1358	-1119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTGAATGGAATCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	90736444	90739786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_90736628_90737888_90737996_90739360
ENSMUSG00000005505.13_90736482_90739857_1	chr2	+	750	3	ISM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	1395	1048	1395	-1048	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATCCAGTGCTTTGACA	NA	NA	NA	NA	NA	NA	NA	NA	90736481	90739857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_90736628_90737888_90737996_90739360
ENSMUSG00000005505.13_90737918_90740002_1	chr2	+	720	2	ISM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	2831	903	2831	-903	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAGACAGCTTCACCCG	NA	NA	NA	NA	NA	NA	NA	NA	90737917	90740002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_90737996_90739360
ENSMUSG00000005505.13_90737978_90740072_1	chr2	+	730	2	ISM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	2891	833	2891	-833	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTGTAATGGCAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	90737977	90740072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_90737996_90739360
ENSMUSG00000005510.10_90724980_90734999_1	chr2	-	868	7	NNC	ENSMUSG00000005510.10	novel	1046	7	NA	NA	-164	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTTCCTCTGTGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	90734999	90724979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733196_90733289_90734766_90734833_90734927
ENSMUSG00000005510.10_90724980_90734999_2	chr2	-	874	7	FSM	ENSMUSG00000005510.10	ENSMUST00000005647.4	1046	7	172	0	-164	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTTCCTCTGTGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	90734999	90724979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734927
ENSMUSG00000005510.10_90732737_90733288_1	chr2	-	387	2	ISM	ENSMUSG00000005510.10	ENST00000534208.5	456	3	1547	0	1547	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCCCAACTCGGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	90733288	90732736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_90732956_90733120
ENSMUSG00000005510.10_90732737_90734833_1	chr2	-	454	3	FSM	ENSMUSG00000005510.10	ENST00000534208.5	456	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCCCAACTCGGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	90734833	90732736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_90732956_90733120_90733289_90734766
ENSMUSG00000005514.15_135718012_135759731_1	chr5	+	649	6	ISM	ENSMUSG00000005514.15	ENSMUST00000122113.8	2606	15	0	4449	0	-4449	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACGCCATGGGCAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	135718011	135759731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697
ENSMUSG00000005514.15_135759173_135762407_1	chr5	+	662	7	ISM	ENSMUSG00000005514.15	ENSMUST00000122113.8	2606	15	41161	1773	41161	-1773	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCACCTACTACCTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	135759172	135762407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355
ENSMUSG00000005514.15_135759993_135762769_1	chr5	+	704	6	ISM	ENSMUSG00000005514.15	ENSMUST00000122113.8	2606	15	41981	1411	41981	-1411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTAAGGTGAAGGGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	135759992	135762769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626
ENSMUSG00000005514.15_135761337_135762901_1	chr5	+	589	5	ISM	ENSMUSG00000005514.15	ENSMUST00000122113.8	2606	15	43325	1279	43325	-1279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCGCCGTGGCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	135761336	135762901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880
ENSMUSG00000005514.15_135761538_135763012_1	chr5	+	585	4	ISM	ENSMUSG00000005514.15	ENSMUST00000122113.8	2606	15	43526	1168	43526	-1168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCCCCATGTTCGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	135761537	135763012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135761659_135762355_135762538_135762626_135762777_135762880
ENSMUSG00000005514.15_135761578_135763076_1	chr5	+	609	4	ISM	ENSMUSG00000005514.15	ENSMUST00000122113.8	2606	15	43566	1104	43566	-1104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGTGGGCCCCGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	135761577	135763076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135761659_135762355_135762538_135762626_135762777_135762880
ENSMUSG00000005514.15_135761617_135763139_1	chr5	+	633	4	ISM	ENSMUSG00000005514.15	ENSMUST00000122113.8	2606	15	43605	1041	43605	-1041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCGAGAGCAAGGTAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	135761616	135763139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135761659_135762355_135762538_135762626_135762777_135762880
ENSMUSG00000005514.15_135762355_135763257_1	chr5	+	625	4	ISM	ENSMUSG00000005514.15	ENSMUST00000122113.8	2606	15	44343	923	44343	-923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTACTACGGCTGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	135762354	135763257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135762538_135762626_135762777_135762880_135763152_135763236
ENSMUSG00000005514.15_135762403_135763317_1	chr5	+	637	4	ISM	ENSMUSG00000005514.15	ENSMUST00000122113.8	2606	15	44391	863	44391	-863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCACAAGGACGGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	135762402	135763317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135762538_135762626_135762777_135762880_135763152_135763236
ENSMUSG00000005514.15_135762523_135763511_1	chr5	+	619	5	ISM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	44633	669	44511	-669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTGGAAGCTGATCCAC	NA	NA	NA	NA	NA	NA	NA	NA	135762522	135763511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474
ENSMUSG00000005514.15_135762698_135763708_1	chr5	+	624	5	ISM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	44808	472	44686	-472	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATCGTGGCCGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	135762697	135763708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
ENSMUSG00000005514.15_135762752_135763757_1	chr5	+	619	5	ISM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	44862	423	44740	-423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTAAGAAGCTCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	135762751	135763757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
ENSMUSG00000005514.15_135762972_135763893_1	chr5	+	639	4	ISM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	45082	287	44960	-287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCCTGGACACAGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	135762971	135763893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135763152_135763236_135763383_135763474_135763561_135763666
ENSMUSG00000005514.15_135763034_135763978_1	chr5	+	662	4	ISM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	45144	202	45022	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGGCAGCCTAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	135763033	135763978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135763152_135763236_135763383_135763474_135763561_135763666
ENSMUSG00000005514.15_135763283_135764180_1	chr5	+	700	3	ISM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	45393	0	45271	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTGTTGATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	135763282	135764180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135763383_135763474_135763561_135763666
ENSMUSG00000005566.15_12758184_12759293_1	chr7	+	868	2	ISM	ENSMUSG00000005566.15	ENST00000253024.10	3070	17	-63	5659	-63	-5659	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTGATAGTGGCAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	12758183	12759293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12758989_12759230
ENSMUSG00000005566.15_12758403_12761588_1	chr7	+	877	4	ISM	ENSMUSG00000005566.15	ENST00000253024.10	3070	17	156	3364	-86	-3364	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACAAGCATGAGCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	12758402	12761588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543
ENSMUSG00000005566.15_12758596_12761975_1	chr7	+	920	6	ISM	ENSMUSG00000005566.15	ENST00000253024.10	3070	17	349	2977	107	-2977	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGTGCAGGTTGATGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	12758595	12761975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947
ENSMUSG00000005566.15_12758692_12762429_1	chr7	+	760	5	ISM	ENSMUSG00000005566.15	ENST00000341753.10	2582	15	203	2523	203	-2523	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCTCTGGAGAGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	12758691	12762429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12758989_12761543_12761680_12761759_12761877_12761947_12762063_12762334
ENSMUSG00000005566.15_12758735_12762435_1	chr7	+	723	5	ISM	ENSMUSG00000005566.15	ENST00000341753.10	2582	15	246	2517	246	-2517	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGGAGAGTGATAACAATA	NA	NA	NA	NA	NA	NA	NA	NA	12758734	12762435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12758989_12761543_12761680_12761759_12761877_12761947_12762063_12762334
ENSMUSG00000005566.15_12758739_12762429_1	chr7	+	959	7	ISM	ENSMUSG00000005566.15	ENST00000253024.10	3070	17	492	2523	250	-2523	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCTCTGGAGAGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	12758738	12762429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334
ENSMUSG00000005566.15_12758857_12762612_1	chr7	+	915	8	ISM	ENSMUSG00000005566.15	ENST00000253024.10	3070	17	610	2340	368	-2340	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCAAAATGATTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	12758856	12762612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590
ENSMUSG00000005566.15_12758919_12762657_1	chr7	+	898	8	ISM	ENSMUSG00000005566.15	ENST00000253024.10	3070	17	672	2295	430	-2295	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCAGTGGGATCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	12758918	12762657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590
ENSMUSG00000005566.15_12759231_12762914_1	chr7	+	983	8	ISM	ENSMUSG00000005566.15	ENST00000253024.10	3070	17	984	2038	742	-2038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCTGGGGAGAGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	12759230	12762914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807
ENSMUSG00000005566.15_12759568_12763179_1	chr7	+	956	9	ISM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	1489	1783	1079	-1773	internal_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTGGCAGCCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	12759567	12763179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133
ENSMUSG00000005566.15_12762052_12763727_1	chr7	+	841	8	ISM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	3973	1235	3563	-1225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGTACCAGCTCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	12762051	12763727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602
ENSMUSG00000005566.15_12762590_12764030_1	chr7	+	900	7	ISM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	4511	932	4101	-922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCACGTGCTCCCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	12762589	12764030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009
ENSMUSG00000005566.15_12762807_12764302_1	chr7	+	975	7	ISM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	4728	660	4318	-650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTCCCAGAACAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	12762806	12764302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215
ENSMUSG00000005566.15_12763129_12764519_1	chr7	+	973	6	ISM	ENSMUSG00000005566.15	ENST00000341753.10	2582	15	4640	433	4640	-433	internal_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCTGCAGAATGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	12763128	12764519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381
ENSMUSG00000005566.15_12763363_12764680_1	chr7	+	894	6	ISM	ENSMUSG00000005566.15	ENST00000341753.10	2582	15	4874	272	4874	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTGACACCAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	12763362	12764680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ENSMUSG00000005566.15_12763427_12764728_1	chr7	+	878	6	ISM	ENSMUSG00000005566.15	ENST00000341753.10	2582	15	4938	224	4938	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTTCCCAGTGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	12763426	12764728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ENSMUSG00000005566.15_12763493_12764773_1	chr7	+	857	6	ISM	ENSMUSG00000005566.15	ENST00000341753.10	2582	15	5004	179	5004	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGATGGCCCCTGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	12763492	12764773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ENSMUSG00000005566.15_12763631_12764962_1	chr7	+	988	5	ISM	ENSMUSG00000005566.15	ENST00000341753.10	2582	15	5142	-10	5142	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	12763630	12764962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ENSMUSG00000005575.17_12769515_12771755_1	chr7	-	677	6	FSM	ENSMUSG00000005575.17	ENSMUST00000005714.14	1472	6	445	350	445	-350	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTACCGGCCCAGGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	12771755	12769514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547
ENSMUSG00000005575.17_12769515_12771824_1	chr7	-	746	6	FSM	ENSMUSG00000005575.17	ENSMUST00000005714.14	1472	6	376	350	376	-350	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTACCGGCCCAGGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	12771824	12769514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547
ENSMUSG00000005575.17_12770180_12772062_1	chr7	-	712	4	ISM	ENSMUSG00000005575.17	ENSMUST00000005714.14	1472	6	138	1015	138	-1015	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGACCTCGAGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	12772062	12770179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_12770243_12770360_12770400_12770492_12770588_12771547
ENSMUSG00000005583.17_83652359_83810609_1	chr13	+	1629	11	FSM	ENSMUSG00000005583.17	ENSMUST00000005722.14	6217	11	0	4588	0	-141	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTTCCTACGATGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	83652358	83810609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_83652496_83668503_83668600_83723653_83723850_83740896_83741101_83773588_83773727_83781173_83781361_83783540_83783589_83800932_83801106_83803625_83803756_83804335_83804472_83810425
ENSMUSG00000005583.17_83652480_83810750_1	chr13	+	1649	11	FSM	ENSMUSG00000005583.17	ENSMUST00000005722.14	6217	11	121	4447	121	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATTATTACTTAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	83652479	83810750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_83652496_83668503_83668600_83723653_83723850_83740896_83741101_83773588_83773727_83781173_83781361_83783540_83783589_83800932_83801106_83803625_83803756_83804335_83804472_83810425
ENSMUSG00000005583.17_83673039_83810948_1	chr13	+	1736	11	FSM	ENSMUSG00000005583.17	ENST00000637732.1	3397	11	64	1597	54	198	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGCACTTGAGTTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	83673038	83810948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_83673109_83723656_83723850_83740896_83741101_83773383_83773528_83781173_83781361_83783540_83783589_83800932_83801106_83802716_83802741_83803625_83803756_83804335_83804472_83810521
ENSMUSG00000005583.17_83673039_83811002_1	chr13	+	1790	11	FSM	ENSMUSG00000005583.17	ENST00000637732.1	3397	11	64	1543	54	252	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTTCACTGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	83673038	83811002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_83673109_83723656_83723850_83740896_83741101_83773383_83773528_83781173_83781361_83783540_83783589_83800932_83801106_83802716_83802741_83803625_83803756_83804335_83804472_83810521
ENSMUSG00000005583.17_83723656_83811121_1	chr13	+	1840	10	ISM	ENSMUSG00000005583.17	ENSMUST00000197146.5	6088	11	1930	4078	-140	-341	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTTTACTGAAAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	83723655	83811121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_83723850_83740896_83741101_83773383_83773528_83781173_83781361_83783540_83783589_83800932_83801106_83802716_83802741_83803625_83803756_83804335_83804472_83810521
ENSMUSG00000005583.17_83723796_83810858_1	chr13	+	1503	9	ISM	ENSMUSG00000005583.17	ENST00000625674.2	4440	11	71437	2565	0	108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTCAGGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	83723795	83810858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_83723850_83740896_83741101_83773588_83773727_83781173_83781361_83783540_83783589_83800932_83801106_83803625_83803756_83804335_83804472_83810425
ENSMUSG00000005583.17_83740894_83811257_1	chr13	+	1785	9	ISM	ENSMUSG00000005583.17	ENSMUST00000197146.5	6088	11	19168	3942	17098	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCAGGCATATCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	83740893	83811257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_83741101_83773383_83773528_83781173_83781361_83783540_83783589_83800932_83801106_83802716_83802741_83803625_83803756_83804335_83804472_83810521
ENSMUSG00000005583.17_83740929_83811033_1	chr13	+	1592	8	ISM	ENSMUSG00000005583.17	ENST00000625674.2	4440	11	88570	2390	17133	283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATGTTACAATAGATAG	NA	NA	NA	NA	NA	NA	NA	NA	83740928	83811033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_83741101_83773588_83773727_83781173_83781361_83783540_83783589_83800932_83801106_83803625_83803756_83804335_83804472_83810425
ENSMUSG00000005583.17_83740998_83811087_1	chr13	+	1577	8	ISM	ENSMUSG00000005583.17	ENST00000625674.2	4440	11	88639	2336	17202	337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAGACAAAAGGAAACATT	NA	NA	NA	NA	NA	NA	NA	NA	83740997	83811087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_83741101_83773588_83773727_83781173_83781361_83783540_83783589_83800932_83801106_83803625_83803756_83804335_83804472_83810425
ENSMUSG00000005583.17_83741050_83811136_1	chr13	+	1574	8	ISM	ENSMUSG00000005583.17	ENST00000625674.2	4440	11	88691	2287	17254	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGCAGCTGTTATGCAA	NA	NA	NA	NA	NA	NA	NA	NA	83741049	83811136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_83741101_83773588_83773727_83781173_83781361_83783540_83783589_83800932_83801106_83803625_83803756_83804335_83804472_83810425
ENSMUSG00000005583.17_83773382_83811462_2	chr13	+	1785	8	ISM	ENSMUSG00000005583.17	ENSMUST00000197146.5	6088	11	51656	3737	49586	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTACATTTTGCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	83773381	83811462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_83773528_83781173_83781361_83783540_83783589_83800932_83801106_83802716_83802741_83803625_83803756_83804335_83804472_83810521
ENSMUSG00000005583.17_83773587_83811257_1	chr13	+	1646	7	ISM	ENSMUSG00000005583.17	ENST00000625674.2	4440	11	121228	2166	49791	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCAGGCATATCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	83773586	83811257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_83773727_83781173_83781361_83783540_83783589_83800932_83801106_83803625_83803756_83804335_83804472_83810425
ENSMUSG00000005583.17_83781180_83811462_1	chr13	+	1705	6	ISM	ENSMUSG00000005583.17	ENSMUST00000198217.5	1257	8	57384	-712	57384	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTACATTTTGCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	83781179	83811462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_83781361_83783540_83783589_83800932_83801106_83803625_83803756_83804335_83804472_83810425
ENSMUSG00000005583.17_83802723_83811993_1	chr13	+	1756	4	ISM	ENSMUSG00000005583.17	ENSMUST00000199210.5	1185	9	78927	-1243	78927	181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTCAGCAAACTATTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	83802722	83811993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_83802741_83803625_83803756_83804335_83804472_83810521
ENSMUSG00000005583.17_83803625_83811805_1	chr13	+	1647	3	ISM	ENSMUSG00000005583.17	ENSMUST00000198217.5	1257	8	79829	-1055	79829	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCAGAAGTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	83803624	83811805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_83803756_83804335_83804472_83810425
ENSMUSG00000005583.17_83803736_83812164_1	chr13	+	1799	3	ISM	ENSMUSG00000005583.17	ENSMUST00000199210.5	1185	9	79940	-1414	79940	352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTATCCTAACTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	83803735	83812164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_83803756_83804335_83804472_83810521
ENSMUSG00000005609.17_110628220_110650219_1	chr7	+	2636	20	ISM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	62	5365	62	-5365	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGGAGCTGCGGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	110628219	110650219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151
ENSMUSG00000005609.17_110629422_110650715_1	chr7	+	2593	20	ISM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	1264	4869	1264	-4869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGTGGAGAAGACCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	110629421	110650715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656
ENSMUSG00000005609.17_110633582_110652662_1	chr7	+	2548	20	ISM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	5424	2922	5424	-2922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAGAGCAGAGAAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	110633581	110652662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588
ENSMUSG00000005609.17_110637649_110654667_1	chr7	+	2549	20	ISM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	9491	917	9491	-917	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGCAGGCAGCCCTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	110637648	110654667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ENSMUSG00000005609.17_110642306_110655056_1	chr7	+	2556	17	ISM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	14148	528	14148	-528	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTCAGGTGGTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	110642305	110655056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ENSMUSG00000005609.17_110642356_110655113_1	chr7	+	2563	17	ISM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	14198	471	14198	-471	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTATATTTACTAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	110642355	110655113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ENSMUSG00000005609.17_110642426_110655184_1	chr7	+	2564	17	ISM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	14268	400	14268	-400	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCCTGCATTGTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	110642425	110655184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ENSMUSG00000005609.17_110642818_110655408_1	chr7	+	2657	15	ISM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	14660	176	14660	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGACTGAGTTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	110642817	110655408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ENSMUSG00000005609.17_110643106_110655584_1	chr7	+	2638	14	ISM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	14948	0	14948	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGCCTGTGTGTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	110643105	110655584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ENSMUSG00000005609.17_110643179_110655584_1	chr7	+	2565	14	ISM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	15021	0	15021	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGCCTGTGTGTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	110643178	110655584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ENSMUSG00000005610.18_110669077_110673079_1	chr7	-	2932	2	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	9145	-2062	9145	2062	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGTCAGGATGGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	110673079	110669076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110671965_110673035
ENSMUSG00000005610.18_110669283_110673456_1	chr7	-	3016	3	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	8768	-1856	8768	1856	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCTAGTCAACAGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	110673456	110669282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110671965_110673035_110673158_110673244
ENSMUSG00000005610.18_110669349_110673456_1	chr7	-	2950	3	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	8768	-1790	8768	1790	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGGATTCAATATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	110673456	110669348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110671965_110673035_110673158_110673244
ENSMUSG00000005610.18_110669552_110673703_1	chr7	-	2904	4	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	8521	-1587	8521	1587	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGACTTCACTTTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	110673703	110669551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546
ENSMUSG00000005610.18_110669668_110673963_1	chr7	-	2913	5	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	8261	-1471	8261	1471	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCTCAATGTTAAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	110673963	110669667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886
ENSMUSG00000005610.18_110670068_110674592_1	chr7	-	2960	7	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	7632	-1071	7632	1071	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTCTTTGAATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	110674592	110670067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543
ENSMUSG00000005610.18_110670296_110675553_1	chr7	-	2981	9	ISM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	6684	3339	6671	843	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGAGGAGGCCCATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	110675553	110670295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486
ENSMUSG00000005610.18_110670603_110676180_1	chr7	-	2918	11	ISM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	6057	3646	6044	536	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGTCAAAGAACTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	110676180	110670602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144
ENSMUSG00000005610.18_110670670_110676234_1	chr7	-	2905	11	ISM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	6003	3713	5990	469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTATTCAGTTACTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	110676234	110670669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144
ENSMUSG00000005610.18_110670959_110676958_1	chr7	-	2963	14	ISM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	5279	4002	5266	180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCCCTATCAATCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	110676958	110670958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843
ENSMUSG00000005610.18_110671139_110677546_1	chr7	-	2998	16	ISM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	4691	4182	4678	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	110677546	110671138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479
ENSMUSG00000005610.18_110671258_110677661_1	chr7	-	2912	17	ISM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	4576	4301	4563	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTGAATTGGTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	110677661	110671257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628
ENSMUSG00000005610.18_110671323_110677720_1	chr7	-	2906	17	ISM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	4517	4366	4504	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATCAGTTTGAGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	110677720	110671322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628
ENSMUSG00000005610.18_110671430_110678571_1	chr7	-	2911	18	ISM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	3666	4473	3653	-291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTCTACCTCTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	110678571	110671429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499
ENSMUSG00000005610.18_110671576_110676063_1	chr7	-	1795	9	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	6161	437	6161	-437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAAACTGAATAGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	110676063	110671575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902
ENSMUSG00000005610.18_110671576_110680171_1	chr7	-	3003	20	ISM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	2066	4619	2053	-437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAAACTGAATAGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	110680171	110671575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105
ENSMUSG00000005610.18_110671799_110676681_1	chr7	-	1876	12	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	5543	660	5543	-660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACAATATTTAAAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	110676681	110671798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615
ENSMUSG00000005610.18_110671799_110682034_1	chr7	-	2950	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	203	4842	190	-660	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACAATATTTAAAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	110682034	110671798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ENSMUSG00000005610.18_110673034_110676958_1	chr7	-	1845	12	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	5266	1895	5266	-1895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTTTGTTGAGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	110676958	110673033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843
ENSMUSG00000005610.18_110673034_110682224_1	chr7	-	2976	21	ISM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	13	6077	0	-1895	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTTTGTTGAGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	110682224	110673033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ENSMUSG00000005610.18_110673588_110677735_1	chr7	-	1790	13	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	4489	2449	4489	-2449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATGTAGATAAAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	110677735	110673587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628
ENSMUSG00000005610.18_110673896_110679445_1	chr7	-	1802	14	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	2779	2757	2779	-2757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCCAGGTAAGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	110679445	110673895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388
ENSMUSG00000005610.18_110673966_110679501_1	chr7	-	1788	14	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	2723	2827	2723	-2827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGCTAAATTGCAAGACCG	NA	NA	NA	NA	NA	NA	NA	NA	110679501	110673965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388
ENSMUSG00000005610.18_110674080_110680171_1	chr7	-	1768	15	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	2053	2941	2053	-2941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCACAGTTTGCAGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	110680171	110674079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105
ENSMUSG00000005611.16_110470257_110487790_1	chr7	-	1034	6	ISM	ENSMUSG00000005611.16	ENSMUST00000125758.8	5953	20	57604	2778	57604	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGGGGAAAGTGAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	110487790	110470256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110470810_110476045_110476184_110477348_110477469_110484962_110485028_110487147_110487256_110487740
ENSMUSG00000005611.16_110470374_110495057_1	chr7	-	974	7	ISM	ENSMUSG00000005611.16	ENSMUST00000125758.8	5953	20	50337	2895	50337	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGCTCTGGGAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	110495057	110470373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110470810_110476045_110476184_110477348_110477469_110484962_110485028_110487147_110487256_110487740_110487791_110495000
ENSMUSG00000005611.16_110470613_110498944_1	chr7	-	1016	9	ISM	ENSMUSG00000005611.16	ENSMUST00000125758.8	5953	20	46450	3134	46450	-356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGGAGCTCCGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	110498944	110470612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110470810_110476045_110476184_110477348_110477469_110484962_110485028_110487147_110487256_110487740_110487791_110495000_110495143_110498112_110498245_110498880
ENSMUSG00000005611.16_110470767_110501483_1	chr7	-	963	10	ISM	ENSMUSG00000005611.16	ENSMUST00000125758.8	5953	20	43911	3288	43911	-510	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTGTCAACACTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	110501483	110470766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110470810_110476045_110476184_110477348_110477469_110484962_110485028_110487147_110487256_110487740_110487791_110495000_110495143_110498112_110498245_110498880_110499022_110501459
ENSMUSG00000005611.16_110476046_110504757_1	chr7	-	1051	10	ISM	ENSMUSG00000005611.16	ENSMUST00000125758.8	5953	20	40637	8567	40637	-5789	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAAACCTACGCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	110504757	110476045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110476184_110477348_110477469_110484962_110485028_110487147_110487256_110487740_110487791_110495000_110495143_110498112_110498245_110498880_110499022_110501459_110501491_110504633
ENSMUSG00000005611.16_110477427_110522719_1	chr7	-	966	11	ISM	ENSMUSG00000005611.16	ENSMUST00000125758.8	5953	20	22675	9948	22675	-7170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCACTCCCAAGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	110522719	110477426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110477469_110484962_110485028_110487147_110487256_110487740_110487791_110495000_110495143_110498112_110498245_110498880_110499022_110501459_110501491_110504633_110504758_110520520_110520600_110522667
ENSMUSG00000005611.16_110487148_110522910_1	chr7	-	1050	9	ISM	ENSMUSG00000005611.16	ENSMUST00000125758.8	5953	20	22484	19669	22484	-16891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTATGGTGCTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	110522910	110487147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110487256_110487740_110487791_110495000_110495143_110498112_110498245_110498880_110499022_110501459_110501491_110504633_110504758_110520520_110520600_110522667
ENSMUSG00000005611.16_110498141_110523159_1	chr7	-	971	6	ISM	ENSMUSG00000005611.16	ENSMUST00000125758.8	5953	20	22235	30662	22235	-27884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAAGTGGTGGGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	110523159	110498140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110498245_110498880_110499022_110501459_110501491_110504633_110504758_110520520_110520600_110522667
ENSMUSG00000005611.16_110504634_110525610_1	chr7	-	1055	7	ISM	ENSMUSG00000005611.16	ENSMUST00000125758.8	5953	20	19784	37155	19784	-34377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATCAGGACATGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	110525610	110504633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110504758_110520520_110520600_110522667_110523280_110523518_110523567_110523741_110523795_110524461_110524540_110525549
ENSMUSG00000005611.16_110520582_110525723_1	chr7	-	983	6	ISM	ENSMUSG00000005611.16	ENSMUST00000125758.8	5953	20	19671	53103	19671	-50325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGAACCTGGTGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	110525723	110520581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110520600_110522667_110523280_110523518_110523567_110523741_110523795_110524461_110524540_110525549
ENSMUSG00000005611.16_110522667_110527078_1	chr7	-	1037	6	ISM	ENSMUSG00000005611.16	ENSMUST00000125758.8	5953	20	18316	55188	18316	-52410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTCCTGCCCTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	110527078	110522666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110523280_110523518_110523567_110523741_110523795_110524461_110524540_110525549_110525724_110527007
ENSMUSG00000005611.16_110522861_110545147_1	chr7	-	951	7	ISM	ENSMUSG00000005611.16	ENST00000558540.5	3023	20	36167	52604	247	-52604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGGGGTCTCCTGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	110545147	110522860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110523280_110523518_110523567_110523741_110523795_110524461_110524540_110525549_110525724_110527007_110527079_110545039
ENSMUSG00000005611.16_110523067_110581265_1	chr7	-	892	8	ISM	ENSMUSG00000005611.16	ENST00000558540.5	3023	20	49	52810	49	-52810	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGGCCCTGCTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	110581265	110523066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110523280_110523518_110523567_110523741_110523795_110524461_110524540_110525549_110525724_110527007_110527079_110545039_110545189_110581159
ENSMUSG00000005621.12_80673168_80692231_1	chr7	+	4279	8	ISM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	29739	2681	29739	-2681	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGCAGGCAGGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	80673167	80692231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
ENSMUSG00000005625.16_94940008_94941337_1	chr3	-	603	4	ISM	ENSMUSG00000005625.16	ENSMUST00000071664.12	1276	10	8526	0	8517	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCAAATAGTGATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	94941337	94940007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941219
ENSMUSG00000005625.16_94940008_94942321_1	chr3	-	879	6	ISM	ENSMUSG00000005625.16	ENSMUST00000107237.8	1332	10	7604	3	7533	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCAAATAGTGATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	94942321	94940007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252
ENSMUSG00000005625.16_94940016_94942321_1	chr3	-	871	6	ISM	ENSMUSG00000005625.16	ENSMUST00000107237.8	1332	10	7604	11	7533	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2092	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTTTTGCTTCAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	94942321	94940015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252
ENSMUSG00000005625.16_94940239_94942321_1	chr3	-	657	6	ISM	ENSMUSG00000005625.16	ENSMUST00000071664.12	1276	10	7542	231	7533	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTCCAGGTGTGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	94942321	94940238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941219_94941338_94941876_94942093_94942252
ENSMUSG00000005625.16_94940239_94943235_1	chr3	-	850	8	ISM	ENSMUSG00000005625.16	ENSMUST00000107237.8	1332	10	6690	234	6619	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTCCAGGTGTGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	94943235	94940238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120
ENSMUSG00000005625.16_94940792_94942635_1	chr3	-	688	6	ISM	ENSMUSG00000005625.16	ENSMUST00000117355.2	1756	9	7219	776	7219	-776	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGCCAGCAGTGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	94942635	94940791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94940858_94940943_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942548
ENSMUSG00000005625.16_94940827_94943960_1	chr3	-	804	8	ISM	ENSMUSG00000005625.16	ENSMUST00000107237.8	1332	10	5965	822	5894	-811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCAGCCATGGACACAT	NA	NA	NA	NA	NA	NA	NA	NA	94943960	94940826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915
ENSMUSG00000005625.16_94940944_94949854_1	chr3	-	905	8	ISM	ENSMUSG00000005625.16	ENSMUST00000107237.8	1332	10	71	939	0	-928	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1448	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCCATGGCTTGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	94949854	94940943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ENSMUSG00000005625.16_94941007_94943189_1	chr3	-	628	6	ISM	ENSMUSG00000005625.16	ENSMUST00000117355.2	1756	9	6665	991	6665	-991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCAGCATGACTGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	94943189	94941006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120
ENSMUSG00000005625.16_94941229_94949854_1	chr3	-	773	7	ISM	ENSMUSG00000005625.16	ENSMUST00000117355.2	1756	9	0	1213	0	-1213	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGAGGTGGATTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	94949854	94941228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ENSMUSG00000005649.18_13132220_13142425_2	chr7	+	274	3	NNC	ENSMUSG00000005649.18	novel	421	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAGAGAGAGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	13132219	13142425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_13132310_13135155_13135243_13142328
ENSMUSG00000005649.18_13132220_13142425_3	chr7	+	291	4	FSM	ENSMUSG00000005649.18	ENST00000293255.3	421	4	130	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAGAGAGAGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	13132219	13142425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_13132296_13134629_13134661_13135155_13135243_13142328
ENSMUSG00000005649.18_13132233_13142425_1	chr7	+	276	4	NNC	ENSMUSG00000005649.18	novel	421	4	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAGAGAGAGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	13132232	13142425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_13132296_13134629_13134661_13135155_13135243_13142330
ENSMUSG00000005649.18_13132233_13142425_2	chr7	+	278	4	FSM	ENSMUSG00000005649.18	ENST00000293255.3	421	4	143	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAGAGAGAGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	13132232	13142425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_13132296_13134629_13134661_13135155_13135243_13142328
ENSMUSG00000005649.18_13132233_13142425_3	chr7	+	261	3	NNC	ENSMUSG00000005649.18	novel	421	4	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAGAGAGAGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	13132232	13142425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_13132310_13135155_13135243_13142328
ENSMUSG00000005656.10_54793740_54798742_1	chr12	-	208	3	ISM	ENSMUSG00000005656.10	ENSMUST00000218934.2	1441	12	43525	305	43525	-305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGACGACCTCCCTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	54798742	54793739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54793845_54798566_54798653_54798725
ENSMUSG00000005656.10_54793814_54798774_1	chr12	-	166	3	ISM	ENSMUSG00000005656.10	ENSMUST00000218934.2	1441	12	43493	379	43493	-379	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGTTTTAAATGGAGACACA	NA	NA	NA	NA	NA	NA	NA	NA	54798774	54793813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54793845_54798566_54798653_54798725
ENSMUSG00000005656.10_54801074_54807268_1	chr12	-	213	3	ISM	ENSMUSG00000005656.10	ENSMUST00000218934.2	1441	12	34999	7639	34999	-7639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGCTGTCATTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	54807268	54801073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54801162_54803820_54803861_54807183
ENSMUSG00000005656.10_54801140_54810440_1	chr12	-	174	4	ISM	ENSMUSG00000005656.10	ENSMUST00000218934.2	1441	12	31827	7705	31827	-7705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACGAGGACCTCAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	54810440	54801139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54801162_54803820_54803861_54807183_54807260_54810404
ENSMUSG00000005656.10_54810457_54814834_1	chr12	-	181	3	ISM	ENSMUSG00000005656.10	ENSMUST00000218934.2	1441	12	27433	17022	27433	-17022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGTTAAGGATGCATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	54814834	54810456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54810511_54812368_54812465_54814803
ENSMUSG00000005656.10_54812434_54814927_1	chr12	-	155	2	ISM	ENSMUSG00000005656.10	ENSMUST00000218934.2	1441	12	27340	18999	27340	-18999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCGAGGATTTCTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	54814927	54812433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54812465_54814803
ENSMUSG00000005656.10_54812434_54817518_1	chr12	-	170	3	ISM	ENSMUSG00000005656.10	ENSMUST00000218934.2	1441	12	24749	18999	24749	-18999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCGAGGATTTCTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	54817518	54812433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54812465_54814803_54814928_54817503
ENSMUSG00000005656.10_54817578_54830816_1	chr12	-	176	3	ISM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	11672	24444	11451	-24143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGAAGCTTGGAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	54830816	54817577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54817626_54830187_54830299_54830799
ENSMUSG00000005656.10_54830800_54842437_1	chr12	-	158	3	ISM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	51	37666	51	-37365	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGTGGGGCTTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	54842437	54830799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54830905_54842238_54842287_54842432
ENSMUSG00000005667.9_83282673_83288344_1	chr6	-	1599	5	ISM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	6244	0	2174	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTGTCTCAGTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	83288344	83282672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191
ENSMUSG00000005667.9_83282776_83288825_1	chr6	-	1528	6	ISM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	5763	103	1693	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTAGTCGGATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	83288825	83282775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793
ENSMUSG00000005667.9_83282828_83288876_1	chr6	-	1527	6	ISM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	5712	155	1642	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGTACCCCGTTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	83288876	83282827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793
ENSMUSG00000005667.9_83282889_83288916_1	chr6	-	1506	6	ISM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	5672	216	1602	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATAATCACGAGGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	83288916	83282888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793
ENSMUSG00000005667.9_83283022_83290482_1	chr6	-	1512	7	ISM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	4106	349	36	-349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTATCACGTTTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	83290482	83283021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343
ENSMUSG00000005667.9_83283159_83294535_1	chr6	-	1546	8	FSM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	53	486	53	-486	multi-exon	FALSE	canonical	NA	NA	NA	NA	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCTAGCTGTCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	83294535	83283158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ENSMUSG00000005674.10_171045371_171049584_1	chr1	-	2541	8	ISM	ENSMUSG00000005674.10	ENSMUST00000111326.8	2753	9	433	0	169	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTGTTTCACAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	171049584	171045370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048736_171048830_171049140_171049209_171049472
ENSMUSG00000005677.15_171042515_171045261_1	chr1	+	342	3	FSM	ENSMUSG00000005677.15	ENST00000508387.5	340	3	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCACATTATGGAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	171042514	171045261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_171042644_171044644_171044791_171045194
ENSMUSG00000005677.15_171042515_171045261_2	chr1	+	799	6	FSM	ENSMUSG00000005677.15	ENST00000412844.6	797	6	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCACATTATGGAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	171042514	171045261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_171042644_171043947_171044118_171044314_171044455_171044644_171044791_171044865_171045000_171045181
ENSMUSG00000005677.15_171042515_171045261_3	chr1	+	652	5	FSM	ENSMUSG00000005677.15	ENST00000504010.5	650	5	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCACATTATGGAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	171042514	171045261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_171042644_171043947_171044118_171044314_171044455_171044644_171044791_171045194
ENSMUSG00000005682.10_128140219_128149039_1	chr10	+	1368	9	ISM	ENSMUSG00000005682.10	ENST00000425394.7	4282	25	257	8161	257	-8161	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACTTTGACTTCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	128140218	128149039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009
ENSMUSG00000005682.10_128140287_128149073_1	chr10	+	1334	9	ISM	ENSMUSG00000005682.10	ENST00000425394.7	4282	25	325	8127	325	-8127	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTGGGTTAGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	128140286	128149073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009
ENSMUSG00000005682.10_128140335_128149129_1	chr10	+	1342	9	ISM	ENSMUSG00000005682.10	ENST00000425394.7	4282	25	373	8071	373	-8071	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGCAGGCTCTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	128140334	128149129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009
ENSMUSG00000005682.10_128144904_128150197_1	chr10	+	1422	8	ISM	ENSMUSG00000005682.10	ENSMUST00000219721.2	4316	26	5658	7019	4942	-7003	internal_fragment	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATACCCTGCACCTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	128144903	128150197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051
ENSMUSG00000005682.10_128145011_128150346_1	chr10	+	1345	9	ISM	ENSMUSG00000005682.10	ENST00000257931.9	4407	26	5800	6854	5049	-6854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGCTGAAGCGAAGTATC	NA	NA	NA	NA	NA	NA	NA	NA	128145010	128150346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150198_128150316
ENSMUSG00000005682.10_128145126_128150641_1	chr10	+	1354	10	ISM	ENSMUSG00000005682.10	ENST00000257931.9	4407	26	5915	6559	5164	-6559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGAAGTGAATAGCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	128145125	128150641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150198_128150316_128150424_128150594
ENSMUSG00000005682.10_128146038_128153661_1	chr10	+	2033	15	NNC	ENSMUSG00000005682.10	novel	4407	26	NA	NA	6076	-3539	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1533	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTAGGGCCAAAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	128146037	128153661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151115_128151382_128151527_128151644_128151705_128152299_128152391_128153502
ENSMUSG00000005682.10_128146329_128151432_1	chr10	+	1338	12	NNC	ENSMUSG00000005682.10	novel	4407	26	NA	NA	6367	-5768	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCTACTGTGGTACACA	NA	NA	NA	NA	NA	NA	NA	NA	128146328	128151432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151115_128151382
ENSMUSG00000005682.10_128149061_128153582_1	chr10	+	1344	12	NNC	ENSMUSG00000005682.10	novel	4407	26	NA	NA	9099	-3618	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCATTGATGCTGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	128149060	128153582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128149130_128149483_128149613_128149710_128149911_128150051_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151115_128151382_128151527_128151644_128151705_128152299_128152391_128153502
ENSMUSG00000005682.10_128149565_128153805_1	chr10	+	1319	12	NNC	ENSMUSG00000005682.10	novel	4407	26	NA	NA	9603	-3395	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAGATGTCAGTAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	128149564	128153805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128149613_128149710_128149911_128150051_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151115_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758
ENSMUSG00000005682.10_128149765_128154054_1	chr10	+	1340	12	NNC	ENSMUSG00000005682.10	novel	4282	25	NA	NA	9803	-3146	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGGGGATAAAGCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	128149764	128154054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128149911_128150048_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151115_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031
ENSMUSG00000005682.10_128149805_128154115_1	chr10	+	1361	12	NNC	ENSMUSG00000005682.10	novel	4282	25	NA	NA	9843	-3085	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTACCTACTTAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	128149804	128154115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128149911_128150048_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151115_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031
ENSMUSG00000005682.10_128149816_128154097_1	chr10	+	1323	12	NIC	ENSMUSG00000005682.10	novel	4282	25	NA	NA	9854	-3103	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCACCTCACAACCCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	128149815	128154097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_128149911_128150048_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031
ENSMUSG00000005682.10_128149871_128154153_1	chr10	+	1333	12	NNC	ENSMUSG00000005682.10	novel	4282	25	NA	NA	9909	-3047	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCAAGTTTGTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	128149870	128154153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128149911_128150048_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151115_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031
ENSMUSG00000005682.10_128150362_128156206_1	chr10	+	1341	12	NNC	ENSMUSG00000005682.10	novel	4282	25	NA	NA	10400	-994	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCACCGAGCCCGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	128150361	128156206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128150424_128150594_128150694_128150791_128150863_128150966_128151115_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116
ENSMUSG00000005682.10_128150595_128156314_1	chr10	+	1387	11	NNC	ENSMUSG00000005682.10	novel	4282	25	NA	NA	10633	-886	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCTGGGCTGAGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	128150594	128156314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128150694_128150791_128150863_128150966_128151115_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116
ENSMUSG00000005682.10_128151003_128156757_1	chr10	+	1327	10	ISM	ENSMUSG00000005682.10	ENSMUST00000219721.2	4316	26	11757	459	11041	-443	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAGCAAAATTGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	128151002	128156757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ENSMUSG00000005682.10_128151012_128156765_1	chr10	+	1335	10	NNC	ENSMUSG00000005682.10	novel	4282	25	NA	NA	11050	-435	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTTGCAAAGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	128151011	128156765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128151115_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ENSMUSG00000005682.10_128151643_128157080_1	chr10	+	1405	8	ISM	ENSMUSG00000005682.10	ENST00000425394.7	4282	25	11681	120	11681	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTACTGGCTTCATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	128151642	128157080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ENSMUSG00000005682.10_128153503_128157216_1	chr10	+	1388	6	ISM	ENSMUSG00000005682.10	ENST00000425394.7	4282	25	13541	-16	13541	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	128153502	128157216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ENSMUSG00000005683.9_128173679_128195069_1	chr10	+	1006	8	ISM	ENSMUSG00000005683.9	ENST00000542324.6	1861	11	19	2192	19	-2192	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCCATTTGGTGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	128173678	128195069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128173854_128185567_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038
ENSMUSG00000005683.9_128173679_128195117_1	chr10	+	1054	8	ISM	ENSMUSG00000005683.9	ENST00000542324.6	1861	11	19	2144	19	-2144	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCAGCCATGAATGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	128173678	128195117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128173854_128185567_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038
ENSMUSG00000005683.9_128173817_128195340_1	chr10	+	1005	9	ISM	ENSMUSG00000005683.9	ENST00000542324.6	1861	11	157	1921	157	-1921	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAAGACGTGTCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	128173816	128195340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128173854_128185567_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302
ENSMUSG00000005686.18_110373029_110410177_1	chr7	+	2525	15	FSM	ENSMUSG00000005686.18	ENST00000528723.5	2691	15	11	155	11	-155	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGCCAAGATCTCAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	110373028	110410177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_110373188_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ENSMUSG00000005686.18_110373080_110410227_1	chr7	+	2524	15	FSM	ENSMUSG00000005686.18	ENST00000528723.5	2691	15	62	105	62	-105	multi-exon	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATCTCAAGCTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	110373079	110410227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_110373188_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ENSMUSG00000005686.18_110373108_110410246_1	chr7	+	2515	15	FSM	ENSMUSG00000005686.18	ENST00000528723.5	2691	15	90	86	90	-86	multi-exon	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGTTGCACTTTACGA	NA	NA	NA	NA	NA	NA	NA	NA	110373107	110410246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_110373188_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ENSMUSG00000005686.18_110373119_110410257_1	chr7	+	2511	15	NNC	ENSMUSG00000005686.18	novel	2691	15	NA	NA	101	-75	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTACGAACATGCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	110373118	110410257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_110373188_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399853_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ENSMUSG00000005686.18_110373122_110410266_1	chr7	+	2518	15	NNC	ENSMUSG00000005686.18	novel	2691	15	NA	NA	104	-66	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCTCACTTCGTTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	110373121	110410266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_110373188_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409943
ENSMUSG00000005686.18_110373134_110410275_1	chr7	+	2518	15	FSM	ENSMUSG00000005686.18	ENST00000528723.5	2691	15	116	57	116	-57	multi-exon	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTAGCATTTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	110373133	110410275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_110373188_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ENSMUSG00000005686.18_110373152_110410312_1	chr7	+	2535	15	NNC	ENSMUSG00000005686.18	novel	2691	15	NA	NA	134	-20	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGGGATCTGGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	110373151	110410312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_110373188_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406988_110407161_110409002_110409114_110409940
ENSMUSG00000005686.18_110377060_110394927_1	chr7	+	594	4	ISM	ENSMUSG00000005686.18	ENST00000444303.6	2541	13	59	15625	59	-15405	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAGCCTTCATGAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	110377059	110394927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_110377232_110390394_110390555_110392846_110393067_110394885
ENSMUSG00000005686.18_110377180_110399902_1	chr7	+	615	5	ISM	ENSMUSG00000005686.18	ENST00000444303.6	2541	13	179	10650	179	-10430	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATCAAGCACACGTACC	NA	NA	NA	NA	NA	NA	NA	NA	110377179	110399902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_110377232_110390394_110390555_110392846_110393067_110394885_110395016_110399849
ENSMUSG00000005686.18_110394940_110410735_1	chr7	+	2059	10	ISM	ENSMUSG00000005686.18	ENST00000444303.6	2541	13	17939	-183	17939	183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCATGGTCCACTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	110394939	110410735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ENSMUSG00000005686.18_110399963_110410920_1	chr7	+	2055	9	ISM	ENSMUSG00000005686.18	ENST00000444303.6	2541	13	22962	-368	22962	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCTTCAGGACACAC	NA	NA	NA	NA	NA	NA	NA	NA	110399962	110410920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ENSMUSG00000005686.18_110401688_110411126_1	chr7	+	2130	8	ISM	ENSMUSG00000005686.18	ENST00000444303.6	2541	13	24687	-574	24687	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTGAACTTTAGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	110401687	110411126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ENSMUSG00000005686.18_110402981_110411347_1	chr7	+	2057	6	ISM	ENSMUSG00000005686.18	ENST00000444303.6	2541	13	25980	-795	25980	221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTATTCTGTCCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	110402980	110411347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ENSMUSG00000005686.18_110405168_110411616_1	chr7	+	2085	4	ISM	ENSMUSG00000005686.18	ENST00000444303.6	2541	13	28167	-1064	28167	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTTATTTCTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	110405167	110411616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_110405292_110406986_110407161_110409002_110409114_110409940
ENSMUSG00000005687.15_103078971_103084735_1	chr3	+	669	6	ISM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	0	1733	0	-1733	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGTGACTCCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	103078970	103084735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654
ENSMUSG00000005687.15_103079078_103085763_1	chr3	+	655	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	107	705	107	-705	multi-exon	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCCAACAAGGAAAACATCC	NA	NA	NA	NA	NA	NA	NA	NA	103079077	103085763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ENSMUSG00000005687.15_103079263_103085907_1	chr3	+	696	6	ISM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	292	561	292	-561	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTGTCTTAGCAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	103079262	103085907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ENSMUSG00000005687.15_103081729_103086143_1	chr3	+	694	4	ISM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	2758	325	2758	-325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATGTGTGGCTATAG	NA	NA	NA	NA	NA	NA	NA	NA	103081728	103086143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_103081818_103082934_103082986_103084654_103084736_103085670
ENSMUSG00000005687.15_103081729_103086143_2	chr3	+	688	4	NNC	ENSMUSG00000005687.15	novel	1467	7	NA	NA	2758	-325	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATGTGTGGCTATAG	NA	NA	NA	NA	NA	NA	NA	NA	103081728	103086143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_103081818_103082934_103082986_103084654_103084730_103085670
ENSMUSG00000005698.16_106363200_106409554_1	chr8	+	3861	12	FSM	ENSMUSG00000005698.16	ENST00000646076.1	3963	12	106	-4	-11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106363199	106409554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_106363353_106370147_106370269_106390318_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
ENSMUSG00000005698.16_106363200_106409554_2	chr8	+	3860	12	NNC	ENSMUSG00000005698.16	novel	3963	12	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106363199	106409554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106363353_106370147_106370269_106390318_106391176_106391487_106391659_106393290_106393425_106396863_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
ENSMUSG00000005698.16_106363200_106409554_3	chr8	+	3853	12	NNC	ENSMUSG00000005698.16	novel	3963	12	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1039	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106363199	106409554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106363353_106370147_106370269_106390318_106391176_106391495_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
ENSMUSG00000005698.16_106363200_106409554_4	chr8	+	3855	12	NIC	ENSMUSG00000005698.16	novel	3963	12	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106363199	106409554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_106363353_106370147_106370269_106390318_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408072
ENSMUSG00000005698.16_106363200_106409554_5	chr8	+	3860	12	NNC	ENSMUSG00000005698.16	novel	3963	12	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1048	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106363199	106409554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106363353_106370147_106370269_106390318_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403847_106403983_106406705_106406892_106408066
ENSMUSG00000005698.16_106363200_106409554_6	chr8	+	3860	12	NNC	ENSMUSG00000005698.16	novel	3963	12	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106363199	106409554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106363353_106370147_106370269_106390318_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406706_106406892_106408066
ENSMUSG00000005698.16_106363211_106403898_1	chr8	+	2021	10	ISM	ENSMUSG00000005698.16	ENST00000646771.1	3730	12	-5	5618	0	-5618	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAAATGGAGGGGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	106363210	106403898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846
ENSMUSG00000005698.16_106390702_106408292_1	chr8	+	1939	10	NIC	ENSMUSG00000005698.16	novel	3599	11	NA	NA	20535	-1224	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACGGCCCAAATCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	106390701	106408292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408072
ENSMUSG00000005698.16_106391078_106408652_1	chr8	+	1923	10	NIC	ENSMUSG00000005698.16	novel	3599	11	NA	NA	20911	-864	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAACCTGGTTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	106391077	106408652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408072
ENSMUSG00000005698.16_106391519_106408777_1	chr8	+	1919	9	NIC	ENSMUSG00000005698.16	novel	3599	11	NA	NA	21352	-739	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTATGGTCAAGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	106391518	106408777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408072
ENSMUSG00000005698.16_106391574_106408825_1	chr8	+	1912	9	NIC	ENSMUSG00000005698.16	novel	3599	11	NA	NA	21407	-691	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATTAATTAAGAGGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	106391573	106408825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408072
ENSMUSG00000005698.16_106391624_106408885_1	chr8	+	1922	9	NIC	ENSMUSG00000005698.16	novel	3599	11	NA	NA	21457	-631	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAATTAAGGTGCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	106391623	106408885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408072
ENSMUSG00000005698.16_106396884_106409101_1	chr8	+	1948	7	NIC	ENSMUSG00000005698.16	novel	3599	11	NA	NA	26717	-415	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTACATTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	106396883	106409101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408072
ENSMUSG00000005698.16_106396938_106409148_1	chr8	+	1941	7	NIC	ENSMUSG00000005698.16	novel	3599	11	NA	NA	26771	-368	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATGAGTGGCCACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	106396937	106409148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408072
ENSMUSG00000005698.16_106398011_106409256_1	chr8	+	1915	6	NIC	ENSMUSG00000005698.16	novel	3599	11	NA	NA	27844	-260	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACTTAAAAAGTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	106398010	106409256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408072
ENSMUSG00000005698.16_106398050_106409325_1	chr8	+	1945	6	NIC	ENSMUSG00000005698.16	novel	3599	11	NA	NA	27883	-191	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGATTTCAAACACTTT	NA	NA	NA	NA	NA	NA	NA	NA	106398049	106409325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408072
ENSMUSG00000005698.16_106402643_106409554_1	chr8	+	1975	4	NIC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	32476	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106402642	106409554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_106402811_106403846_106403983_106406702_106406892_106408072
ENSMUSG00000005698.16_106403957_106408557_1	chr8	+	697	3	ISM	ENSMUSG00000005698.16	ENST00000645306.1	3599	11	33790	984	33790	-959	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACCACTCCAGAACGGC	NA	NA	NA	NA	NA	NA	NA	NA	106403956	106408557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106403983_106406705_106406892_106408072
ENSMUSG00000005699.17_106427786_106429988_1	chr8	+	1136	3	FSM	ENSMUSG00000005699.17	ENSMUST00000098444.9	1273	3	0	137	0	-134	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGACAGGCAAAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	106427785	106429988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_106427950_106428805_106429029_106429239
ENSMUSG00000005732.15_18057648_18066522_1	chr16	-	1005	6	NNC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5998	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTGACAAGGCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	18066522	18057647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_18058052_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ENSMUSG00000005732.15_18057648_18066522_2	chr16	-	1006	6	NNC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6838	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTGACAAGGCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	18066522	18057647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065285_18066411
ENSMUSG00000005732.15_18057666_18066596_1	chr16	-	1062	6	NNC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTGAAAACCTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	18066596	18057665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065285_18066411
ENSMUSG00000005732.15_18057666_18066596_2	chr16	-	1061	6	NNC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTGAAAACCTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	18066596	18057665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_18058052_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ENSMUSG00000005763.16_165616334_165689124_2	chr1	+	1037	8	NNC	ENSMUSG00000005763.16	novel	1632	8	NA	NA	0	47	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGAGGCAGGTACAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	165616333	165689124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_165616456_165682734_165682839_165683968_165684026_165684984_165685066_165686019_165686048_165686787_165686845_165687357_165687394_165688572
ENSMUSG00000005763.16_165616334_165689124_4	chr1	+	1037	8	NNC	ENSMUSG00000005763.16	novel	1085	8	NA	NA	0	47	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGAGGCAGGTACAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	165616333	165689124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_165616456_165682734_165682839_165683973_165684026_165684984_165685066_165686014_165686048_165686787_165686845_165687357_165687394_165688572
ENSMUSG00000005763.16_165616334_165689124_5	chr1	+	1045	8	FSM	ENSMUSG00000005763.16	ENSMUST00000005907.12	1632	8	76	511	0	47	multi-exon	FALSE	canonical	NA	NA	NA	NA	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGAGGCAGGTACAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	165616333	165689124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_165616456_165682734_165682839_165683968_165684026_165684984_165685066_165686011_165686048_165686787_165686845_165687357_165687394_165688572
ENSMUSG00000005763.16_165616334_165689124_6	chr1	+	1037	8	NNC	ENSMUSG00000005763.16	novel	1632	8	NA	NA	0	47	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGAGGCAGGTACAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	165616333	165689124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_165616456_165682734_165682839_165683968_165684026_165684984_165685066_165686011_165686048_165686787_165686845_165687357_165687394_165688580
ENSMUSG00000005779.13_94791404_94793532_1	chr3	-	783	5	ISM	ENSMUSG00000005779.13	ENSMUST00000005923.7	1183	7	740	0	740	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTTGTCTTTCTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	94793532	94791403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94791752_94791981_94792071_94792227_94792345_94792970_94793053_94793385
ENSMUSG00000005779.13_94791633_94793890_1	chr3	-	693	6	ISM	ENSMUSG00000005779.13	ENSMUST00000005923.7	1183	7	382	229	382	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGGATTTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	94793890	94791632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94791752_94791981_94792071_94792227_94792345_94792970_94793053_94793385_94793533_94793751
ENSMUSG00000005779.13_94791633_94794099_1	chr3	-	781	7	FSM	ENSMUSG00000005779.13	ENSMUST00000005923.7	1183	7	173	229	173	-229	multi-exon	FALSE	canonical	NA	NA	NA	NA	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGGATTTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	94794099	94791632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_94791752_94791981_94792071_94792227_94792345_94792970_94793053_94793385_94793533_94793751_94793959_94794079
ENSMUSG00000005802.13_122523153_122528020_1	chr2	-	4204	2	ISM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	16539	0	16539	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTATTTTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	122528020	122523152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122527254_122527917
ENSMUSG00000005802.13_122523153_122528054_1	chr2	-	4238	2	ISM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	16505	0	16505	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTATTTTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	122528054	122523152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122527254_122527917
ENSMUSG00000005802.13_122523408_122529834_1	chr2	-	4138	4	ISM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	14725	255	14725	-255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAATAAATATGTGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	122529834	122523407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783
ENSMUSG00000005802.13_122523473_122529901_1	chr2	-	4140	4	ISM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	14658	320	14658	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGCCAGGATGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	122529901	122523472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783
ENSMUSG00000005802.13_122523616_122531404_1	chr2	-	4170	5	ISM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	13155	463	13155	-463	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGATTTGTTGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	122531404	122523615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783_122529989_122531318
ENSMUSG00000005802.13_122523754_122536376_1	chr2	-	4162	6	ISM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	8183	601	8183	-601	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTTAAGATTTGATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	122536376	122523753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783_122529989_122531318_122531473_122536314
ENSMUSG00000005802.13_122523816_122536422_1	chr2	-	4146	6	ISM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	8137	663	8137	-663	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCTAGAACACCATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	122536422	122523815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783_122529989_122531318_122531473_122536314
ENSMUSG00000005802.13_122523877_122536461_1	chr2	-	4124	6	ISM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	8098	724	8098	-724	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACTGTGCTAAGTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	122536461	122523876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783_122529989_122531318_122531473_122536314
ENSMUSG00000005802.13_122524098_122544218_1	chr2	-	4172	7	FSM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	341	945	341	-945	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTTGATCCTGAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	122544218	122524097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783_122529989_122531318_122531473_122536314_122536462_122543949
ENSMUSG00000005802.13_122524173_122544264_1	chr2	-	4143	7	FSM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	295	1020	295	-1020	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGAGACAGAAATAGACT	NA	NA	NA	NA	NA	NA	NA	NA	122544264	122524172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783_122529989_122531318_122531473_122536314_122536462_122543949
ENSMUSG00000005802.13_122524386_122544559_1	chr2	-	4225	7	FSM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	0	1233	0	932	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGCCCAGGTGGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	122544559	122524385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783_122529989_122531318_122531473_122536314_122536462_122543949
ENSMUSG00000005804.15_122580423_122588990_1	chr2	+	1079	5	FSM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	0	2405	0	-2405	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCAGGCTGGGAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	122580422	122588990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_122580625_122584508_122584651_122586045_122586134_122587974_122588062_122588430
ENSMUSG00000005804.15_122584508_122589147_1	chr2	+	1035	4	ISM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	4085	2248	4085	-2248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTCTCTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	122584507	122589147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122584651_122586045_122586134_122587974_122588062_122588430
ENSMUSG00000005804.15_122584557_122589229_1	chr2	+	1068	4	ISM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	4134	2166	4134	-2166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGTTTCTGTACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	122584556	122589229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122584651_122586045_122586134_122587974_122588062_122588430
ENSMUSG00000005804.15_122584624_122589280_1	chr2	+	1052	4	ISM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	4201	2115	4201	-2115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGGCTCTCTATAA	NA	NA	NA	NA	NA	NA	NA	NA	122584623	122589280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122584651_122586045_122586134_122587974_122588062_122588430
ENSMUSG00000005813.13_138166077_138174614_1	chr3	-	415	4	ISM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	20662	1360	20545	-1360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGAACACCATCTCGTACT	NA	NA	NA	NA	NA	NA	NA	NA	138174614	138166076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594
ENSMUSG00000005813.13_138166197_138174726_1	chr3	-	407	4	ISM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	20550	1480	20433	-1480	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTTTGAGCACACCCT	NA	NA	NA	NA	NA	NA	NA	NA	138174726	138166196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594
ENSMUSG00000005813.13_138174606_138180801_1	chr3	-	398	4	ISM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	14475	9889	14358	6684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCGATGCAGGTCAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	138180801	138174605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_138174727_138177911_138178051_138179664_138179749_138180747
ENSMUSG00000005813.13_138180748_138195129_1	chr3	-	429	5	ISM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	147	16031	30	542	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGATTTACTTTTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	138195129	138180747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ENSMUSG00000005813.13_138186449_138195276_1	chr3	-	423	3	ISM	ENSMUSG00000005813.13	ENSMUST00000197531.2	3708	4	-117	5159	0	-5159	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTATGTAAAGTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	138195276	138186448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_138186562_138188827_138188880_138195018
ENSMUSG00000005823.10_57541799_57543214_1	chr17	-	752	3	ISM	ENSMUSG00000005823.10	ENST00000430424.8	1322	14	8886	-495	8886	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCACAGACGTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	57543214	57541798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57542367_57542922_57543048_57543155
ENSMUSG00000005823.10_57541972_57543907_1	chr17	-	735	6	ISM	ENSMUSG00000005823.10	ENST00000430424.8	1322	14	8193	-322	8193	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAATAAAGAAAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	57543907	57541971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870
ENSMUSG00000005823.10_57541972_57543969_1	chr17	-	797	6	ISM	ENSMUSG00000005823.10	ENST00000430424.8	1322	14	8131	-322	8131	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAATAAAGAAAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	57543969	57541971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870
ENSMUSG00000005823.10_57542107_57544227_1	chr17	-	716	7	ISM	ENSMUSG00000005823.10	ENST00000430424.8	1322	14	7873	-187	7873	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGACCAGTCTCTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	57544227	57542106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205
ENSMUSG00000005823.10_57542147_57544295_1	chr17	-	744	7	ISM	ENSMUSG00000005823.10	ENST00000430424.8	1322	14	7805	-147	7805	147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCACCAGGGAGCAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	57544295	57542146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205
ENSMUSG00000005823.10_57542294_57552112_1	chr17	-	1328	14	NNC	ENSMUSG00000005823.10	novel	1636	17	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1364	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCTGTGTCCAGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	57552112	57542293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543379_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550051_57551242_57551369_57552028
ENSMUSG00000005823.10_57542294_57552112_2	chr17	-	1330	14	NIC	ENSMUSG00000005823.10	novel	1636	17	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1497	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCTGTGTCCAGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	57552112	57542293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550051_57551246_57551369_57552028
ENSMUSG00000005823.10_57542294_57552347_1	chr17	-	1386	15	ISM	ENSMUSG00000005823.10	ENST00000264080.11	1636	17	2295	0	-247	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCTGTGTCCAGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	57552347	57542293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550051_57551242_57551369_57552028_57552112_57552294
ENSMUSG00000005823.10_57542345_57553782_1	chr17	-	1352	16	ISM	ENSMUSG00000005823.10	ENST00000264080.11	1636	17	860	51	860	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1583	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCCTGTCCAAAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	57553782	57542344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550051_57551242_57551369_57552028_57552112_57552294_57552346_57553763
ENSMUSG00000005823.10_57542922_57553883_1	chr17	-	1427	15	NNC	ENSMUSG00000005823.10	novel	1636	17	NA	NA	759	-628	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1578	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAAAGCTGTGGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	57553883	57542921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543875_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550051_57551242_57551369_57552028_57552112_57552294_57552346_57553763
ENSMUSG00000005823.10_57542922_57553883_2	chr17	-	1432	15	ISM	ENSMUSG00000005823.10	ENST00000264080.11	1636	17	759	628	759	-628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2019	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAAAGCTGTGGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	57553883	57542921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550051_57551242_57551369_57552028_57552112_57552294_57552346_57553763
ENSMUSG00000005823.10_57543027_57554531_1	chr17	-	1348	16	ISM	ENSMUSG00000005823.10	ENST00000264080.11	1636	17	111	733	111	-733	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTCTTCGTGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	57554531	57543026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550051_57551242_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ENSMUSG00000005823.10_57543156_57554663_1	chr17	-	1459	15	ISM	ENSMUSG00000005823.10	ENST00000264080.11	1636	17	-21	862	9	-862	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCAAGGTGGAGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	57554663	57543155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550051_57551242_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ENSMUSG00000005823.10_57543156_57554663_2	chr17	-	1458	15	NNC	ENSMUSG00000005823.10	novel	1636	17	NA	NA	9	-862	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1392	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCAAGGTGGAGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	57554663	57543155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550051_57551242_57551369_57552029_57552112_57552294_57552346_57553763_57553884_57554510
ENSMUSG00000005823.10_57544251_57551317_1	chr17	-	727	7	ISM	ENSMUSG00000005823.10	ENSMUST00000233568.2	2405	17	3355	2616	783	-1957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCGGACAAGGAGAAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	57551317	57544250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246
ENSMUSG00000005823.10_57544303_57551368_1	chr17	-	726	7	ISM	ENSMUSG00000005823.10	ENSMUST00000233568.2	2405	17	3304	2668	732	-2009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCACCATCGCCTTGATCG	NA	NA	NA	NA	NA	NA	NA	NA	57551368	57544302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246
ENSMUSG00000005823.10_57544423_57552111_1	chr17	-	789	7	ISM	ENSMUSG00000005823.10	ENSMUST00000233568.2	2405	17	2561	2788	-11	-2129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCGCCCAGCTGTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	57552111	57544422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028
ENSMUSG00000005823.10_57545053_57553853_1	chr17	-	756	7	ISM	ENSMUSG00000005823.10	ENSMUST00000233568.2	2405	17	819	3418	789	-2759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCCGTGCTCTGCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	57553853	57545052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763
ENSMUSG00000005823.10_57549730_57554663_1	chr17	-	832	7	ISM	ENSMUSG00000005823.10	ENSMUST00000233568.2	2405	17	9	8095	9	-7436	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCGGGATAAGTGTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	57554663	57549729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ENSMUSG00000005846.13_11010834_11021099_1	chr16	-	1841	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	96	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	11021099	11010833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017343_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUSG00000005846.13_11010834_11021099_2	chr16	-	1839	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	96	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1078	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	11021099	11010833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017258_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUSG00000005846.13_11010834_11021099_3	chr16	-	1843	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	96	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	11021099	11010833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_11011602_11012329_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUSG00000005846.13_11010834_11021099_4	chr16	-	1840	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	96	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	11021099	11010833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_11011602_11012323_11012567_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUSG00000005846.13_11010834_11021099_5	chr16	-	1848	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	96	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	11021099	11010833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020317_11021010
ENSMUSG00000005846.13_11010834_11021099_6	chr16	-	1840	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	96	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	11021099	11010833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_11011602_11012323_11012576_11014137_11014252_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUSG00000005846.13_11010834_11021099_7	chr16	-	1849	9	FSM	ENSMUSG00000005846.13	ENSMUST00000119953.2	1945	9	96	0	96	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	11021099	11010833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUSG00000005873.7_34478707_34482862_1	chr18	-	1685	2	NNC	ENSMUSG00000005873.7	novel	2852	5	NA	NA	23537	-769	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAATTGTTAGGCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	34482862	34478706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_34480217_34482687
ENSMUSG00000005873.7_34478707_34482862_2	chr18	-	1690	2	ISM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	23560	769	23537	-769	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAATTGTTAGGCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	34482862	34478706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_34480222_34482687
ENSMUSG00000005873.7_34479075_34506313_1	chr18	-	1601	5	NNC	ENSMUSG00000005873.7	novel	2852	5	NA	NA	86	839	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	838	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGACAGATAGAATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	34506313	34479074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_34480217_34482687_34482857_34490144_34490284_34505457_34505552_34506256
ENSMUSG00000005873.7_34479096_34506311_1	chr18	-	1583	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	111	1158	88	818	multi-exon	FALSE	canonical	NA	NA	NA	NA	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTTCAGTTTTAGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34506311	34479095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
ENSMUSG00000005873.7_34479141_34506422_1	chr18	-	1649	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	0	1203	0	773	multi-exon	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTTACTTTACAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	34506422	34479140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
ENSMUSG00000005873.7_34479146_34506422_1	chr18	-	1639	5	NNC	ENSMUSG00000005873.7	novel	2852	5	NA	NA	0	768	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTCTCCTTACTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	34506422	34479145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_34480217_34482687_34482857_34490144_34490284_34505457_34505552_34506256
ENSMUSG00000005881.14_155849965_155859636_1	chr2	+	1112	11	ISM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	0	563	0	-434	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1731	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGTATAGAGCGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	155849964	155859636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499
ENSMUSG00000005881.14_155850026_155850868_1	chr2	+	371	4	ISM	ENSMUSG00000005881.14	ENST00000357394.8	1216	13	25	9202	0	-9202	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCGTGAGCTCAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	155850025	155850868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779
ENSMUSG00000005881.14_155850143_155859772_1	chr2	+	976	11	NIC	ENSMUSG00000005881.14	novel	1349	14	NA	NA	117	-298	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGGTTGCAGGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	155850142	155859772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155858607_155858723_155858808_155858874_155859499_155859637_155859716
ENSMUSG00000005881.14_155850143_155859772_2	chr2	+	990	12	ISM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	178	427	117	-298	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGGTTGCAGGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	155850142	155859772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716
ENSMUSG00000005881.14_155850284_155860070_1	chr2	+	1065	12	ISM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	319	129	258	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCCCTTCCCCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	155850283	155860070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ENSMUSG00000005881.14_155850284_155860070_2	chr2	+	1051	11	NIC	ENSMUSG00000005881.14	novel	1349	14	NA	NA	258	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCCCTTCCCCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	155850283	155860070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155858607_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ENSMUSG00000005881.14_155850539_155860199_1	chr2	+	1067	11	ISM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	574	0	513	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTCTCAGTGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	155850538	155860199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ENSMUSG00000005881.14_155850780_155860199_1	chr2	+	1020	9	NIC	ENSMUSG00000005881.14	novel	1349	14	NA	NA	754	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTCTCAGTGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	155850779	155860199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155858607_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ENSMUSG00000005881.14_155850780_155860199_2	chr2	+	1034	9	NNC	ENSMUSG00000005881.14	novel	1349	14	NA	NA	754	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTCTCAGTGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	155850779	155860199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_155850900_155852359_155852454_155853019_155853186_155853268_155853341_155858607_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ENSMUSG00000005881.14_155850780_155860199_3	chr2	+	1026	10	NNC	ENSMUSG00000005881.14	novel	1377	13	NA	NA	754	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	999	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTCTCAGTGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	155850779	155860199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859507_155859637_155859716_155859773_155859990
ENSMUSG00000005881.14_155850780_155860199_4	chr2	+	1034	10	ISM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	815	0	754	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1870	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTCTCAGTGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	155850779	155860199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ENSMUSG00000005882.19_155688814_155690203_1	chr2	-	1180	2	ISM	ENSMUSG00000005882.19	ENST00000374385.10	2183	11	81760	0	81753	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCCTGGAATGGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	155690203	155688813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155689619_155689828
ENSMUSG00000005882.19_155689105_155729138_1	chr2	-	1356	4	ISM	ENSMUSG00000005882.19	ENST00000374384.6	2117	10	42825	303	42818	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAATGAGTCATATGAA	NA	NA	NA	NA	NA	NA	NA	NA	155729138	155689104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155689619_155689828_155690447_155693278_155693393_155729028
ENSMUSG00000005882.19_155689432_155753675_1	chr2	-	1282	8	ISM	ENSMUSG00000005882.19	ENST00000374384.6	2117	10	18288	630	18281	-591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTTAGAAAGAACAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	155753675	155689431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155689619_155689828_155690447_155693278_155693393_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660
ENSMUSG00000005882.19_155689542_155751316_1	chr2	-	1098	7	ISM	ENSMUSG00000005882.19	ENST00000374385.10	2183	11	20647	728	20640	618	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCCCAGGTCACAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	155751316	155689541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155689619_155689828_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272
ENSMUSG00000005882.19_155689574_155763598_1	chr2	-	1265	9	ISM	ENSMUSG00000005882.19	ENST00000374384.6	2117	10	8365	772	8358	586	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAGGCCAGGGGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	155763598	155689573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155689619_155689828_155690447_155693278_155693393_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554
ENSMUSG00000005882.19_155689867_155752387_1	chr2	-	1123	7	ISM	ENSMUSG00000005882.19	ENST00000374385.10	2183	11	19576	1053	19569	293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTTTTCTTTGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	155752387	155689866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276
ENSMUSG00000005882.19_155690104_155763647_1	chr2	-	1072	9	ISM	ENSMUSG00000005882.19	ENST00000374385.10	2183	11	8316	1290	8309	56	internal_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAAGAGAAGCCCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	155763647	155690103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554
ENSMUSG00000005883.16_172821642_172834898_3	chr2	+	1110	11	NNC	ENSMUSG00000005883.16	novel	1067	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGCAGGGAACGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	172821641	172834898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_172821818_172825808_172825898_172826664_172826732_172827189_172827299_172827696_172827784_172828895_172829031_172830723_172830824_172831160_172831199_172831716_172831794_172833840_172833951_172834776
ENSMUSG00000005883.16_172821642_172834898_4	chr2	+	1112	11	FSM	ENSMUSG00000005883.16	ENST00000345868.8	1067	11	-45	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGCAGGGAACGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	172821641	172834898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_172821818_172825808_172825898_172826664_172826732_172827189_172827299_172827696_172827784_172828895_172829031_172830723_172830824_172831160_172831199_172831716_172831794_172833838_172833951_172834776
ENSMUSG00000005883.16_172821642_172834898_5	chr2	+	1106	11	NNC	ENSMUSG00000005883.16	novel	1067	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGCAGGGAACGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	172821641	172834898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_172821818_172825808_172825898_172826664_172826732_172827189_172827299_172827696_172827784_172828895_172829031_172830729_172830824_172831160_172831199_172831716_172831794_172833838_172833951_172834776
ENSMUSG00000005883.16_172821642_172834898_6	chr2	+	1106	11	NNC	ENSMUSG00000005883.16	novel	1067	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGCAGGGAACGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	172821641	172834898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_172821818_172825808_172825898_172826664_172826732_172827189_172827299_172827696_172827784_172828895_172829031_172830723_172830824_172831160_172831199_172831716_172831794_172833838_172833951_172834782
ENSMUSG00000005883.16_172821642_172834898_7	chr2	+	1106	11	NNC	ENSMUSG00000005883.16	novel	1067	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGCAGGGAACGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	172821641	172834898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_172821818_172825808_172825898_172826664_172826732_172827189_172827299_172827696_172827784_172828895_172829025_172830723_172830824_172831160_172831199_172831716_172831794_172833838_172833951_172834776
ENSMUSG00000005883.16_172821642_172834898_8	chr2	+	1109	11	NNC	ENSMUSG00000005883.16	novel	1067	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGCAGGGAACGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	172821641	172834898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_172821818_172825808_172825898_172826664_172826732_172827189_172827299_172827696_172827784_172828898_172829031_172830723_172830824_172831160_172831199_172831716_172831794_172833838_172833951_172834776
ENSMUSG00000005883.16_172823770_172833846_1	chr2	+	826	10	ISM	ENSMUSG00000005883.16	ENST00000371263.8	1181	12	2083	1052	2083	-1052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTAAGGATAGTTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	172823769	172833846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172823886_172825808_172825898_172826664_172826732_172827189_172827299_172827696_172827784_172828895_172829031_172830723_172830824_172831160_172831199_172831716_172831794_172833838
ENSMUSG00000005893.15_92068518_92133596_1	chr6	+	845	6	ISM	ENSMUSG00000005893.15	ENST00000425241.5	2423	14	92	11313	92	-11090	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCAATTGTGCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	92068517	92133596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_92068724_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552
ENSMUSG00000005893.15_92068656_92134435_1	chr6	+	860	7	ISM	ENSMUSG00000005893.15	ENST00000425241.5	2423	14	230	10474	230	-10251	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATACGTGAGGATGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	92068655	92134435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_92068724_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386
ENSMUSG00000005893.15_92116777_92135372_1	chr6	+	883	7	ISM	ENSMUSG00000005893.15	ENSMUST00000113463.8	2368	15	47363	9314	47363	-9314	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAATCTTTGAACAACG	NA	NA	NA	NA	NA	NA	NA	NA	92116776	92135372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310
ENSMUSG00000005893.15_92116777_92135444_1	chr6	+	955	7	ISM	ENSMUSG00000005893.15	ENSMUST00000113463.8	2368	15	47363	9242	47363	-9242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGAGCCCCTCTGATACT	NA	NA	NA	NA	NA	NA	NA	NA	92116776	92135444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310
ENSMUSG00000005893.15_92126583_92136237_1	chr6	+	907	7	ISM	ENSMUSG00000005893.15	ENSMUST00000113463.8	2368	15	57169	8449	57169	-8449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTCCAAGCCTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	92126582	92136237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192
ENSMUSG00000005893.15_92126717_92136370_1	chr6	+	906	7	ISM	ENSMUSG00000005893.15	ENSMUST00000113463.8	2368	15	57303	8316	57303	-8316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACGTTAGCACATGC	NA	NA	NA	NA	NA	NA	NA	NA	92126716	92136370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192
ENSMUSG00000005893.15_92129294_92137421_1	chr6	+	961	7	ISM	ENSMUSG00000005893.15	ENSMUST00000113463.8	2368	15	59880	7265	59880	-7265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGCTTTTATTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	92129293	92137421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299
ENSMUSG00000005893.15_92131329_92138926_1	chr6	+	876	7	ISM	ENSMUSG00000005893.15	ENSMUST00000113463.8	2368	15	61915	5760	61915	-5760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAATGAGCTCTTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	92131328	92138926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893
ENSMUSG00000005893.15_92131394_92138967_1	chr6	+	852	7	ISM	ENSMUSG00000005893.15	ENSMUST00000113463.8	2368	15	61980	5719	61980	-5719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCATGAGTCTCTCCACC	NA	NA	NA	NA	NA	NA	NA	NA	92131393	92138967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893
ENSMUSG00000005893.15_92133553_92140239_1	chr6	+	954	7	ISM	ENSMUSG00000005893.15	ENSMUST00000113463.8	2368	15	64139	4447	64139	-4447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATATGTGGTGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	92133552	92140239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101
ENSMUSG00000005893.15_92134385_92141274_1	chr6	+	914	7	ISM	ENSMUSG00000005893.15	ENSMUST00000113463.8	2368	15	64971	3412	64971	-3412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGCACAAGGCCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	92134384	92141274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168
ENSMUSG00000005893.15_92135350_92144516_1	chr6	+	856	7	ISM	ENSMUSG00000005893.15	ENSMUST00000113463.8	2368	15	65936	170	65936	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCATTGGCAATGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	92135349	92144516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ENSMUSG00000005893.15_92135412_92144570_1	chr6	+	848	7	ISM	ENSMUSG00000005893.15	ENSMUST00000113463.8	2368	15	65998	116	65998	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAGCAGAATATAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	92135411	92144570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ENSMUSG00000005893.15_92136192_92144686_1	chr6	+	932	6	ISM	ENSMUSG00000005893.15	ENSMUST00000113463.8	2368	15	66778	0	66778	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTTGGTGTGCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	92136191	92144686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ENSMUSG00000005893.15_92138893_92144910_1	chr6	+	856	4	ISM	ENSMUSG00000005893.15	ENSMUST00000113463.8	2368	15	69479	-224	69479	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCTAAGAACAGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	92138892	92144910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_92139034_92140101_92140240_92141168_92141275_92144439
ENSMUSG00000005899.15_17446940_17461716_1	chr16	+	2855	12	ISM	ENSMUSG00000005899.15	ENSMUST00000006053.13	4623	20	9722	976	7589	505	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCATCATATGTATGCATT	NA	NA	NA	NA	NA	NA	NA	NA	17446939	17461716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17447063_17449849_17449922_17453345_17453433_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ENSMUSG00000005917.16_21945418_21948468_1	chr11	-	1740	2	ISM	ENSMUSG00000005917.16	ENSMUST00000006071.14	2789	5	3147	654	3147	-654	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAACAGAAGCAAAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	21948468	21945417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21947059_21948369
ENSMUSG00000005936.20_29171439_29186446_1	chr17	+	1733	7	FSM	ENSMUSG00000005936.20	ENSMUST00000118762.9	3853	7	43	2077	-4	-151	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGAAGTGAAACTTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	29171438	29186446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_29171544_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ENSMUSG00000005949.10_73074547_73077196_1	chr11	-	1531	3	ISM	ENSMUSG00000005949.10	ENSMUST00000108476.8	2723	12	12672	124	2416	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTATAAGACGAATATTG	NA	NA	NA	NA	NA	NA	NA	NA	73077196	73074546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_73075878_73076063_73076182_73077114
ENSMUSG00000005949.10_73074816_73078631_1	chr11	-	1540	5	ISM	ENSMUSG00000005949.10	ENSMUST00000108476.8	2723	12	11237	393	981	190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTCAGGACCAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	73078631	73074815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562
ENSMUSG00000005949.10_73075006_73079632_1	chr11	-	1271	8	NNC	ENSMUSG00000005949.10	novel	1253	8	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTACCTGCTGCCCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	73079632	73075005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_73075405_73075762_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078564_73078663_73079255_73079388_73079514
ENSMUSG00000005949.10_73075006_73079632_2	chr11	-	1267	8	NNC	ENSMUSG00000005949.10	novel	1253	8	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTACCTGCTGCCCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	73079632	73075005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_73075405_73075762_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079382_73079514
ENSMUSG00000005949.10_73075006_73079632_3	chr11	-	1273	8	FSM	ENSMUSG00000005949.10	ENST00000381870.8	1253	8	-20	0	-20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTACCTGCTGCCCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	73079632	73075005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_73075405_73075762_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514
ENSMUSG00000005949.10_73075006_73079632_4	chr11	-	1266	8	NNC	ENSMUSG00000005949.10	novel	1253	8	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTACCTGCTGCCCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	73079632	73075005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_73075398_73075762_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514
ENSMUSG00000005949.10_73075006_73079632_5	chr11	-	1270	8	NNC	ENSMUSG00000005949.10	novel	1253	8	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTACCTGCTGCCCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	73079632	73075005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_73075405_73075762_73075878_73076063_73076182_73077114_73077286_73078347_73078465_73078562_73078663_73079255_73079388_73079514
ENSMUSG00000005949.10_73075006_73079632_6	chr11	-	1272	8	NNC	ENSMUSG00000005949.10	novel	1253	8	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTACCTGCTGCCCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	73079632	73075005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_73075405_73075762_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079256_73079388_73079514
ENSMUSG00000005949.10_73075170_73082588_1	chr11	-	1538	8	ISM	ENSMUSG00000005949.10	ENSMUST00000108476.8	2723	12	7280	747	-2976	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTGGGATCAAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	73082588	73075169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503
ENSMUSG00000005950.15_73051411_73058365_1	chr11	+	739	7	NIC	ENSMUSG00000005950.15	novel	2395	13	NA	NA	-11	-434	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCCTCCCACTGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	73051410	73058365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_73051560_73055681_73055833_73056968_73057045_73057130_73057228_73057387_73057469_73057738_73057878_73058319
ENSMUSG00000005950.15_73055762_73058798_1	chr11	+	764	8	ISM	ENSMUSG00000005950.15	ENSMUST00000006104.10	2395	13	4515	4713	4340	-1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGGCTCTTCTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	73055761	73058798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_73055833_73056365_73056438_73056968_73057045_73057130_73057228_73057387_73057469_73057738_73057878_73058319_73058454_73058704
ENSMUSG00000005950.15_73055762_73058798_2	chr11	+	692	7	NIC	ENSMUSG00000005950.15	novel	2395	13	NA	NA	4340	-1	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGGCTCTTCTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	73055761	73058798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_73055833_73056968_73057045_73057130_73057228_73057387_73057469_73057738_73057878_73058319_73058454_73058704
ENSMUSG00000005952.16_73129085_73151335_1	chr11	+	2488	15	NNC	ENSMUSG00000005952.16	novel	2525	15	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACCATGAAGCAGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	73129084	73151335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_73129369_73130102_73130270_73130346_73130500_73130966_73131108_73131208_73131508_73132431_73132582_73135028_73135188_73136801_73136898_73138996_73139068_73141528_73141695_73142082_73142150_73143848_73144169_73145022_73145147_73145594_73145711_73151160
ENSMUSG00000005952.16_73129085_73151335_4	chr11	+	2492	15	FSM	ENSMUSG00000005952.16	ENST00000576351.5	2525	15	33	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACCATGAAGCAGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	73129084	73151335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_73129369_73130102_73130270_73130346_73130500_73130966_73131108_73131208_73131508_73132431_73132582_73135028_73135188_73136801_73136898_73138996_73139068_73141528_73141695_73142082_73142150_73143848_73144169_73145018_73145147_73145594_73145711_73151160
ENSMUSG00000005968.15_94520426_94535522_1	chr3	-	727	3	ISM	ENSMUSG00000005968.15	ENST00000353024.4	1363	8	30585	120	30585	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGGGGAATAGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	94535522	94520425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94521065_94530054_94530124_94535503
ENSMUSG00000005968.15_94520624_94541833_1	chr3	-	759	5	ISM	ENSMUSG00000005968.15	ENST00000353024.4	1363	8	24274	318	24274	-318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTAGTACCAGTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	94541833	94520623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94521065_94530054_94530124_94535503_94535618_94539903_94539970_94541764
ENSMUSG00000005968.15_94520820_94546334_1	chr3	-	774	7	ISM	ENSMUSG00000005968.15	ENST00000353024.4	1363	8	19773	514	19773	-514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGAAGATTCTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	94546334	94520819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94521065_94530054_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231
ENSMUSG00000005968.15_94520927_94566110_1	chr3	-	745	8	FSM	ENSMUSG00000005968.15	ENST00000353024.4	1363	8	-3	621	-3	-621	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGGGATATAGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	94566110	94520926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_94521065_94530054_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94566031
ENSMUSG00000005973.7_105217274_105219409_1	chr2	-	1186	2	ISM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	10255	638	10255	-638	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	105219409	105217273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_105218372_105219321
ENSMUSG00000005973.7_105217274_105219522_1	chr2	-	1299	2	ISM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	10142	638	10142	-638	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	105219522	105217273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_105218372_105219321
ENSMUSG00000005973.7_105217274_105222381_1	chr2	-	1365	3	ISM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	7283	638	7283	-638	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	105222381	105217273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_105218372_105219321_105219522_105222314
ENSMUSG00000005973.7_105217624_105225111_1	chr2	-	1276	5	ISM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	4553	988	4553	-988	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGGATAGGAAAAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	105225111	105217623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023
ENSMUSG00000005973.7_105217735_105225217_1	chr2	-	1271	5	ISM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	4447	1099	4447	-1099	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTATAGACCTGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	105225217	105217734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023
ENSMUSG00000005973.7_105217868_105229427_1	chr2	-	1251	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	237	1232	237	-1232	multi-exon	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACTGTTAAACGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	105229427	105217867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ENSMUSG00000005973.7_105217933_105229501_1	chr2	-	1260	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	163	1297	163	-1297	multi-exon	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGTGGGACACTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	105229501	105217932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ENSMUSG00000005973.7_105217989_105229664_1	chr2	-	1367	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	0	1353	0	-1353	multi-exon	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACTTAACTCATTAATGG	NA	NA	NA	NA	NA	NA	NA	NA	105229664	105217988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ENSMUSG00000005981.12_3857835_3895691_1	chr16	-	2313	18	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	3895691	3857834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886727_3886886_3895556
ENSMUSG00000005981.12_3857835_3895691_2	chr16	-	2312	18	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	3895691	3857834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862555_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ENSMUSG00000005981.12_3857835_3895691_3	chr16	-	2315	18	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	3895691	3857834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886881_3895556
ENSMUSG00000005981.12_3857835_3895691_4	chr16	-	2313	18	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	3895691	3857834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880200_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ENSMUSG00000005981.12_3857835_3895691_5	chr16	-	2314	18	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	3895691	3857834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862482_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ENSMUSG00000005981.12_3857835_3895691_6	chr16	-	2312	18	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	3895691	3857834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874296_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ENSMUSG00000005982.15_3702512_3719969_1	chr16	+	823	5	NNC	ENSMUSG00000005982.15	novel	866	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATACTGGTCATCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	3702511	3719969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3719648
ENSMUSG00000005982.15_3702512_3719969_2	chr16	+	825	5	NNC	ENSMUSG00000005982.15	novel	866	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATACTGGTCATCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	3702511	3719969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_3702664_3712232_3712349_3715114_3715245_3717735_3717833_3719639
ENSMUSG00000005982.15_3702512_3719969_3	chr16	+	832	5	FSM	ENSMUSG00000005982.15	ENST00000421765.7	866	5	34	0	-11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATACTGGTCATCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	3702511	3719969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3719639
ENSMUSG00000005982.15_3702512_3719969_4	chr16	+	825	5	NNC	ENSMUSG00000005982.15	novel	866	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATACTGGTCATCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	3702511	3719969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717742_3717833_3719639
ENSMUSG00000005982.15_3715115_3719969_1	chr16	+	460	2	ISM	ENSMUSG00000005982.15	ENSMUST00000175809.8	279	3	2876	-291	2876	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATACTGGTCATCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	3715114	3719969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_3715245_3719639
ENSMUSG00000005983.16_3723662_3725589_1	chr16	-	962	3	NNC	ENSMUSG00000005983.16	novel	968	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTTGTTTGTTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	3725589	3723661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_3724165_3724704_3725053_3725478
ENSMUSG00000005983.16_3723662_3725589_2	chr16	-	968	3	FSM	ENSMUSG00000005983.16	ENST00000437192.8	968	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTTGTTTGTTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	3725589	3723661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_3724165_3724704_3725059_3725478
ENSMUSG00000005983.16_3723662_3725589_3	chr16	-	961	3	NNC	ENSMUSG00000005983.16	novel	968	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTTGTTTGTTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	3725589	3723661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_3724158_3724704_3725059_3725478
ENSMUSG00000005994.15_80755874_80767992_1	chr4	+	434	4	NNC	ENSMUSG00000005994.15	novel	817	5	NA	NA	51	-1127	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCTATTGGACATAACAG	NA	NA	NA	NA	NA	NA	NA	NA	80755873	80767992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_80755941_80763027_80763189_80764807_80764988_80767966
ENSMUSG00000005994.15_80755882_80768008_1	chr4	+	446	4	NNC	ENSMUSG00000005994.15	novel	817	5	NA	NA	59	-1111	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGCAATACAACATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	80755881	80768008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_80755941_80763027_80763200_80764814_80764988_80767966
ENSMUSG00000005994.15_80755889_80768027_1	chr4	+	465	4	NNC	ENSMUSG00000005994.15	novel	817	5	NA	NA	66	-1092	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTCTGGCCTCCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	80755888	80768027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_80755941_80763027_80763200_80764807_80764988_80767966
ENSMUSG00000005994.15_80763055_80768934_1	chr4	+	487	4	ISM	ENSMUSG00000005994.15	ENST00000381136.2	817	5	7232	185	7232	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATCATTACCATTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	80763054	80768934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_80763196_80764807_80764988_80767966_80768114_80768915
ENSMUSG00000005994.15_80763130_80768959_1	chr4	+	434	4	NNC	ENSMUSG00000005994.15	novel	817	5	NA	NA	7307	-160	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCGTTGTTACTTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	80763129	80768959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_80763200_80764814_80764988_80767966_80768114_80768915
ENSMUSG00000005994.15_80763134_80768953_1	chr4	+	420	4	NNC	ENSMUSG00000005994.15	novel	817	5	NA	NA	7311	-166	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGGCTGCGTTGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	80763133	80768953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_80763189_80764807_80764988_80767966_80768114_80768915
ENSMUSG00000005994.15_80763138_80768964_1	chr4	+	434	4	ISM	ENSMUSG00000005994.15	ENST00000381136.2	817	5	7315	155	7315	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTACTTGTAGCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	80763137	80768964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_80763196_80764807_80764988_80767966_80768114_80768915
ENSMUSG00000005994.15_80763153_80768991_1	chr4	+	441	4	NNC	ENSMUSG00000005994.15	novel	817	5	NA	NA	7330	-128	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCTTCTTGTCTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	80763152	80768991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_80763196_80764807_80764988_80767966_80768114_80768920
ENSMUSG00000005994.15_80763175_80769031_1	chr4	+	464	4	ISM	ENSMUSG00000005994.15	ENST00000381136.2	817	5	7352	88	7352	-88	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCAACCAGCCTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	80763174	80769031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_80763196_80764807_80764988_80767966_80768114_80768915
ENSMUSG00000005994.15_80763178_80769053_1	chr4	+	480	4	NNC	ENSMUSG00000005994.15	novel	817	5	NA	NA	7355	-66	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATCACTATCAACGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	80763177	80769053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_80763200_80764814_80764988_80767966_80768114_80768915
ENSMUSG00000005994.15_80764825_80769119_1	chr4	+	509	3	NNC	ENSMUSG00000005994.15	novel	817	5	NA	NA	9002	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	854	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCCGCCTGCCCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	80764824	80769119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_80764988_80767966_80768114_80768920
ENSMUSG00000005994.15_80767966_80769119_1	chr4	+	351	2	NNC	ENSMUSG00000005994.15	novel	817	5	NA	NA	12143	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCCGCCTGCCCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	80767965	80769119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_80768118_80768920
ENSMUSG00000006005.19_150268589_150278056_1	chr1	+	709	5	ISM	ENSMUSG00000006005.19	ENSMUST00000124973.9	7430	52	0	47510	0	-47510	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGAACCAATGAGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	150268588	150278056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005
ENSMUSG00000006005.19_150269248_150287728_1	chr1	+	1477	13	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	247	37958	247	-37838	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAATACAAATAAAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	150269247	150287728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651
ENSMUSG00000006005.19_150269351_150288713_1	chr1	+	1477	14	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	350	36973	350	-36853	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACATCAGTAGTTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	150269350	150288713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641
ENSMUSG00000006005.19_150279634_150290458_1	chr1	+	1525	12	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	10633	35228	10633	-35108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGAGAAACTTCAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	150279633	150290458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416
ENSMUSG00000006005.19_150279711_150290510_1	chr1	+	1500	12	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	10710	35176	10710	-35056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGCGCTCACAAAACACC	NA	NA	NA	NA	NA	NA	NA	NA	150279710	150290510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416
ENSMUSG00000006005.19_150279770_150290560_1	chr1	+	1491	12	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	10769	35126	10769	-35006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGGTAAATTTTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	150279769	150290560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416
ENSMUSG00000006005.19_150282258_150291872_1	chr1	+	1483	12	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	13257	33814	13257	-33694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAGAGAGAAATCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	150282257	150291872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819
ENSMUSG00000006005.19_150284609_150293772_1	chr1	+	1471	11	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	15608	31914	15608	-31794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTCACTTGAAGAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	150284608	150293772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698
ENSMUSG00000006005.19_150285764_150295697_1	chr1	+	1495	10	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	16763	29989	16763	-29869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTAATAATATGGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	150285763	150295697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588
ENSMUSG00000006005.19_150285806_150295754_1	chr1	+	1510	10	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	16805	29932	16805	-29812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGAGAGTAGCTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	150285805	150295754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588
ENSMUSG00000006005.19_150287748_150297513_1	chr1	+	1418	10	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	18747	28173	18747	-28053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGACCAGCTTAGAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	150287747	150297513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386
ENSMUSG00000006005.19_150288698_150298363_1	chr1	+	1475	10	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	19697	27323	19697	-27203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTAGAGAAGGAAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	150288697	150298363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278
ENSMUSG00000006005.19_150288821_150298861_1	chr1	+	1474	11	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	19820	26825	19820	-26705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGAGAGCAAGCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	150288820	150298861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807
ENSMUSG00000006005.19_150289514_150299338_1	chr1	+	1472	11	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	20513	26348	20513	-26228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACATCAATCCGTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	150289513	150299338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236
ENSMUSG00000006005.19_150290246_150299590_1	chr1	+	1493	11	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	21245	26096	21245	-25976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAACCGACTACTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	150290245	150299590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547
ENSMUSG00000006005.19_150291897_150300531_1	chr1	+	1472	10	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	22896	25155	22896	-25035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGAATGTGGAAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	150291896	150300531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413
ENSMUSG00000006005.19_150293189_150301511_1	chr1	+	1484	10	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	24188	24175	24188	-24055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAAGCCAAGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	150293188	150301511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387
ENSMUSG00000006005.19_150293725_150302731_1	chr1	+	1511	10	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	24724	22955	24724	-22835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACGGAACCAGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	150293724	150302731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613
ENSMUSG00000006005.19_150295705_150305159_1	chr1	+	1499	11	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	26704	20527	26704	-20407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAAGGCATTCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	150295704	150305159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085
ENSMUSG00000006005.19_150297460_150305274_1	chr1	+	1491	10	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	28459	20412	28459	-20292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGAAAGCGCAACAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	150297459	150305274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085
ENSMUSG00000006005.19_150298412_150306956_1	chr1	+	1474	11	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	29411	18730	29411	-18610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTGCAGCTTCAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	150298411	150306956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912
ENSMUSG00000006005.19_150299336_150308289_1	chr1	+	1509	10	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	30335	17397	30335	-17277	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTTAGAGAGAGAGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	150299335	150308289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161
ENSMUSG00000006005.19_150300490_150309578_1	chr1	+	1433	10	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	31489	16108	31489	-15988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGACCACTACCCCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	150300489	150309578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428
ENSMUSG00000006005.19_150301414_150311484_1	chr1	+	1485	10	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	32413	14202	32413	-14082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTCAGCCCATCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	150301413	150311484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393
ENSMUSG00000006005.19_150301474_150311528_1	chr1	+	1469	10	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	32473	14158	32473	-14038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTTTGTACAACCCACT	NA	NA	NA	NA	NA	NA	NA	NA	150301473	150311528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393
ENSMUSG00000006005.19_150303908_150312603_1	chr1	+	1521	9	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	34907	13083	34907	-12963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTTGGAACCGAGGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	150303907	150312603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468
ENSMUSG00000006005.19_150305115_150314890_1	chr1	+	1554	10	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	36114	10796	36114	-10676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAATCGATCTTGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	150305114	150314890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832
ENSMUSG00000006005.19_150306965_150316239_1	chr1	+	1495	10	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	37964	9447	37964	-9327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGAAAGTCATCAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	150306964	150316239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189
ENSMUSG00000006005.19_150308171_150317933_1	chr1	+	1516	10	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	39170	7753	39170	-7633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTCCCCCCACGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	150308170	150317933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809
ENSMUSG00000006005.19_150308252_150317969_1	chr1	+	1471	10	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	39251	7717	39251	-7597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGCTGGGACCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	150308251	150317969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809
ENSMUSG00000006005.19_150309496_150320194_1	chr1	+	1491	11	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	40495	5492	40495	-5372	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATCTTGGCCAACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	150309495	150320194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118
ENSMUSG00000006005.19_150311492_150321936_1	chr1	+	1479	12	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	42491	3750	42491	-3630	internal_fragment	TRUE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAGCAGCAGGTGACGA	NA	NA	NA	NA	NA	NA	NA	NA	150311491	150321936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835
ENSMUSG00000006005.19_150311543_150321992_1	chr1	+	1484	12	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	42542	3694	42542	-3574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGATTTTATTGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	150311542	150321992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835
ENSMUSG00000006005.19_150312526_150324955_1	chr1	+	1484	13	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	43525	731	43525	-611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTCGTGGTCGTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	150312525	150324955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893
ENSMUSG00000006005.19_150313186_150325566_1	chr1	+	1478	13	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	44185	120	44185	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTGACGAATCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	150313185	150325566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ENSMUSG00000006005.19_150314833_150325686_1	chr1	+	1546	12	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	45832	0	45832	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTTTCTTCATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	150314832	150325686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ENSMUSG00000006010.15_150237647_150239258_1	chr1	-	1010	2	ISM	ENSMUSG00000006010.15	ENSMUST00000006167.13	1716	13	29212	-625	29212	-583	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGGCTGAAGAGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	150239258	150237646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_150238640_150239241
ENSMUSG00000006010.15_150237804_150247858_1	chr1	-	1023	3	ISM	ENSMUSG00000006010.15	ENSMUST00000006167.13	1716	13	20612	-468	20612	468	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAACTATAGGAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	150247858	150237803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_150238640_150239241_150239350_150247779
ENSMUSG00000006010.15_150237844_150247922_1	chr1	-	1047	3	ISM	ENSMUSG00000006010.15	ENSMUST00000006167.13	1716	13	20548	-428	20548	428	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTATATCATGAGGTACA	NA	NA	NA	NA	NA	NA	NA	NA	150247922	150237843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_150238640_150239241_150239350_150247779
ENSMUSG00000006010.15_150238026_150251279_1	chr1	-	1017	5	ISM	ENSMUSG00000006010.15	ENSMUST00000006167.13	1716	13	17191	-246	17191	246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCCTCAATCCAGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	150251279	150238025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246
ENSMUSG00000006010.15_150238084_150251333_1	chr1	-	1013	5	ISM	ENSMUSG00000006010.15	ENSMUST00000006167.13	1716	13	17137	-188	17137	188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGGACTGTGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	150251333	150238083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246
ENSMUSG00000006010.15_150238143_150251375_1	chr1	-	996	5	ISM	ENSMUSG00000006010.15	ENSMUST00000006167.13	1716	13	17095	-129	17095	129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCCGTAGTTTATAGAC	NA	NA	NA	NA	NA	NA	NA	NA	150251375	150238142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246
ENSMUSG00000006010.15_150238285_150258082_1	chr1	-	1080	8	ISM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	10749	1229	10388	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	150258082	150238284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018
ENSMUSG00000006010.15_150238490_150260264_1	chr1	-	1074	10	ISM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	8567	1434	8206	-218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTCTGCTACGTTAACA	NA	NA	NA	NA	NA	NA	NA	NA	150260264	150238489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179
ENSMUSG00000006010.15_150239251_150262199_1	chr1	-	1028	10	ISM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	6632	2195	6271	-979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAGGTATTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	150262199	150239250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108
ENSMUSG00000006010.15_150247900_150266048_1	chr1	-	1011	11	ISM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	2783	10844	2422	-9628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATGTGACTATAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	150266048	150247899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986
ENSMUSG00000006010.15_150250555_150268470_1	chr1	-	1040	11	ISM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	361	13499	0	-12283	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTATGACTATA	NA	NA	NA	NA	NA	NA	NA	NA	150268470	150250554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ENSMUSG00000006010.15_150256089_150268688_1	chr1	-	1021	9	ISM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	143	19033	118	-17817	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTCCGAGTGCTAACA	NA	NA	NA	NA	NA	NA	NA	NA	150268688	150256088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ENSMUSG00000006010.15_150257286_150268806_1	chr1	-	1063	8	ISM	ENSMUSG00000006010.15	ENSMUST00000097546.9	3174	13	0	20222	0	-19014	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAGGCAACGATTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	150268806	150257285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ENSMUSG00000006024.14_15832383_15848150_1	chr7	+	885	8	ISM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	0	3750	0	-2788	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCCCACCAGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	15832382	15848150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045
ENSMUSG00000006024.14_15832383_15849196_1	chr7	+	954	9	ISM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	0	2704	0	-1742	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATCGGATCTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	15832382	15849196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127
ENSMUSG00000006024.14_15832563_15850484_1	chr7	+	921	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	180	1416	-38	-454	multi-exon	FALSE	canonical	NA	NA	NA	NA	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTAGGCCTCCAGCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	15832562	15850484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ENSMUSG00000006024.14_15841541_15850664_1	chr7	+	901	10	ISM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	9158	1236	8940	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGGTGCCCTCCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	15841540	15850664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ENSMUSG00000006024.14_15846503_15850783_1	chr7	+	892	8	ISM	ENSMUSG00000006024.14	ENST00000595227.5	1220	10	13902	155	13902	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTTCCATATCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	15846502	15850783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ENSMUSG00000006024.14_15847427_15850930_1	chr7	+	826	5	ISM	ENSMUSG00000006024.14	ENST00000595227.5	1220	10	14826	8	14826	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCTCATGGGGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	15847426	15850930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ENSMUSG00000006024.14_15848090_15851037_1	chr7	+	824	4	NNC	ENSMUSG00000006024.14	novel	1220	10	NA	NA	15489	99	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTTTTGCATGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	15848089	15851037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_15848151_15849127_15849197_15849524_15849576_15850394
ENSMUSG00000006050.13_36799734_36803561_1	chr18	-	1666	5	NNC	ENSMUSG00000006050.13	novel	1979	5	NA	NA	307	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTTCTGTCTGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	36803561	36799733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_36800713_36800843_36800947_36801704_36801902_36803056_36803183_36803300
ENSMUSG00000006050.13_36799734_36803561_2	chr18	-	1672	5	FSM	ENSMUSG00000006050.13	ENSMUST00000173875.9	1979	5	307	0	307	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTTCTGTCTGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	36803561	36799733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300
ENSMUSG00000006050.13_36799848_36803561_1	chr18	-	1558	5	FSM	ENSMUSG00000006050.13	ENSMUST00000173875.9	1979	5	307	114	307	-114	multi-exon	FALSE	canonical	NA	NA	NA	NA	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTATTTCAACAACTAGA	NA	NA	NA	NA	NA	NA	NA	NA	36803561	36799847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300
ENSMUSG00000006050.13_36799848_36803561_2	chr18	-	1552	5	NNC	ENSMUSG00000006050.13	novel	1979	5	NA	NA	307	-114	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTATTTCAACAACTAGA	NA	NA	NA	NA	NA	NA	NA	NA	36803561	36799847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_36800713_36800843_36800947_36801704_36801902_36803056_36803183_36803300
ENSMUSG00000006057.16_95963532_95964827_1	chr11	-	732	3	ISM	ENSMUSG00000006057.16	ENSMUST00000107686.8	691	5	1580	-281	1036	281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGGACTTACTATAGACC	NA	NA	NA	NA	NA	NA	NA	NA	95964827	95963531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_95964045_95964348_95964528_95964787
ENSMUSG00000006057.16_95963664_95966496_1	chr11	-	729	5	FSM	ENSMUSG00000006057.16	ENSMUST00000090541.12	4715	5	0	3986	0	149	multi-exon	FALSE	canonical	NA	NA	NA	NA	1736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGTGCTTTGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	95966496	95963663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966452
ENSMUSG00000006057.16_95963816_95966445_1	chr11	-	590	5	NNC	ENSMUSG00000006057.16	novel	596	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCATGTGCCTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	95966445	95963815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966388
ENSMUSG00000006057.16_95963929_95966496_1	chr11	-	386	4	FSM	ENSMUSG00000006057.16	ENST00000506855.1	456	4	-21	91	0	-91	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCTGGGGTCACCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	95966496	95963928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_95964045_95964348_95964528_95965812_95965860_95966452
ENSMUSG00000006058.11_95930141_95932533_1	chr11	+	186	2	ISM	ENSMUSG00000006058.11	ENSMUST00000107700.4	849	7	4350	5723	4350	-5723	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTCAAACATCGGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	95930140	95932533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_95930244_95932450
ENSMUSG00000006095.13_29923562_29931107_1	chr7	-	820	6	FSM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	590	6	-444	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGTGCAAGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	29931107	29923561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29931004
ENSMUSG00000006095.13_29923562_29931150_1	chr7	-	863	6	FSM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	547	6	-487	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGTGCAAGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	29931150	29923561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29931004
ENSMUSG00000006095.13_29923562_29931182_1	chr7	-	895	6	FSM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	515	6	515	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGTGCAAGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	29931182	29923561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29931004
ENSMUSG00000006095.13_29923700_29931233_1	chr7	-	808	6	FSM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	464	144	464	-43	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGATTTCCCAGAGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	29931233	29923699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29931004
ENSMUSG00000006095.13_29923711_29930569_1	chr7	-	154	3	FSM	ENSMUSG00000006095.13	ENST00000586868.1	302	3	94	54	94	-54	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCACCGTAGGAGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	29930569	29923710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_29923773_29923897_29923971_29930550
ENSMUSG00000006095.13_29923945_29931416_1	chr7	-	871	5	ISM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	281	389	281	-288	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTGGTGTCCGATATGA	NA	NA	NA	NA	NA	NA	NA	NA	29931416	29923944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29931004
ENSMUSG00000006095.13_29926351_29931527_1	chr7	-	874	4	ISM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	170	2795	170	-2694	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGCCATCTCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	29931527	29926350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29926461_29927028_29927126_29930550_29930695_29931004
ENSMUSG00000006095.13_29927029_29931697_1	chr7	-	934	3	ISM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	0	3473	0	-3372	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATGCATGGGCAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	29931697	29927028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29927126_29930550_29930695_29931004
ENSMUSG00000006127.10_75522408_75529066_1	chr11	+	768	6	ISM	ENSMUSG00000006127.10	ENST00000320345.10	2469	12	26	10443	26	-10443	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAGAAAGATCAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	75522407	75529066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75522570_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970
ENSMUSG00000006127.10_75523961_75538290_1	chr11	+	1141	10	ISM	ENSMUSG00000006127.10	ENST00000320345.10	2469	12	1579	1219	1579	-1219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACCTGCACTCTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	75523960	75538290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227
ENSMUSG00000006127.10_75524350_75538557_1	chr11	+	1160	10	ISM	ENSMUSG00000006127.10	ENST00000320345.10	2469	12	1968	952	1968	-952	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGGGCGGAGGCTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	75524349	75538557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ENSMUSG00000006127.10_75528273_75538744_1	chr11	+	1145	8	ISM	ENSMUSG00000006127.10	ENST00000320345.10	2469	12	5891	765	5891	-765	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGATGTGATTGAAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	75528272	75538744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ENSMUSG00000006127.10_75528321_75538801_1	chr11	+	1154	8	ISM	ENSMUSG00000006127.10	ENST00000320345.10	2469	12	5939	708	5939	-708	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATATAGACTTGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	75528320	75538801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ENSMUSG00000006127.10_75528999_75538903_1	chr11	+	1137	7	ISM	ENSMUSG00000006127.10	ENST00000320345.10	2469	12	6617	606	6617	-606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACATGCCCTATCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	75528998	75538903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ENSMUSG00000006127.10_75530306_75539029_1	chr11	+	1155	6	ISM	ENSMUSG00000006127.10	ENST00000320345.10	2469	12	7924	480	7924	-480	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAATTCTTGGCATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	75530305	75539029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ENSMUSG00000006127.10_75536299_75539153_1	chr11	+	1148	5	ISM	ENSMUSG00000006127.10	ENST00000320345.10	2469	12	13917	356	13917	-356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGGAAGTCCTAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	75536298	75539153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ENSMUSG00000006127.10_75537612_75539293_1	chr11	+	1143	4	ISM	ENSMUSG00000006127.10	ENST00000320345.10	2469	12	15230	216	15230	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCATCTTCACTGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	75537611	75539293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75537750_75538018_75538103_75538227_75538333_75538477
ENSMUSG00000006127.10_75537672_75539361_1	chr11	+	1151	4	ISM	ENSMUSG00000006127.10	ENST00000320345.10	2469	12	15290	148	15290	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGGAACTAGGTGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	75537671	75539361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75537750_75538018_75538103_75538227_75538333_75538477
ENSMUSG00000006127.10_75538058_75539465_1	chr11	+	1138	3	ISM	ENSMUSG00000006127.10	ENST00000320345.10	2469	12	15676	44	15676	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTCAGTGCCTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	75538057	75539465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75538103_75538227_75538333_75538477
ENSMUSG00000006154.14_4472888_4482241_1	chr7	+	1904	11	FSM	ENSMUSG00000006154.14	ENST00000586329.5	1905	11	14	-13	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGCTGTCCCCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	4472887	4482241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_4473042_4473281_4473432_4473806_4473890_4474225_4474488_4474794_4474922_4475111_4475201_4475297_4475373_4475473_4475623_4476929_4477213_4480328_4480459_4481839
ENSMUSG00000006154.14_4472933_4482241_1	chr7	+	1859	11	FSM	ENSMUSG00000006154.14	ENST00000586329.5	1905	11	59	-13	59	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGCTGTCCCCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	4472932	4482241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_4473042_4473281_4473432_4473806_4473890_4474225_4474488_4474794_4474922_4475111_4475201_4475297_4475373_4475473_4475623_4476929_4477213_4480328_4480459_4481839
ENSMUSG00000006154.14_4476930_4481906_1	chr7	+	1019	7	NNC	ENSMUSG00000006154.14	novel	2975	20	NA	NA	-2	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	1843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACAGAAGTCATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	4476929	4481906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_4477213_4480328_4480459_4480562_4480695_4480888_4480998_4481138_4481314_4481627_4481751_4481839
ENSMUSG00000006154.14_4476930_4481906_2	chr7	+	1024	7	NNC	ENSMUSG00000006154.14	novel	2975	20	NA	NA	-2	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	2689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACAGAAGTCATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	4476929	4481906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_4477213_4480328_4480459_4480562_4480695_4480888_4480998_4481138_4481314_4481617_4481751_4481844
ENSMUSG00000006154.14_4476930_4481906_3	chr7	+	1021	7	NNC	ENSMUSG00000006154.14	novel	2975	20	NA	NA	-2	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	1945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACAGAAGTCATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	4476929	4481906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_4477213_4480328_4480459_4480562_4480695_4480896_4480998_4481138_4481314_4481617_4481751_4481839
ENSMUSG00000006154.14_4476930_4481906_4	chr7	+	1029	7	FSM	ENSMUSG00000006154.14	ENST00000588359.5	1026	7	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACAGAAGTCATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	4476929	4481906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_4477213_4480328_4480459_4480562_4480695_4480888_4480998_4481138_4481314_4481617_4481751_4481839
ENSMUSG00000006154.14_4476930_4481906_5	chr7	+	1022	7	NNC	ENSMUSG00000006154.14	novel	2975	20	NA	NA	-2	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	2440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACAGAAGTCATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	4476929	4481906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_4477213_4480328_4480452_4480562_4480695_4480888_4480998_4481138_4481314_4481617_4481751_4481839
ENSMUSG00000006179.10_22187096_22187417_1	chr13	-	248	2	ISM	ENSMUSG00000006179.10	ENSMUST00000150547.3	1159	5	3165	375	3165	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGAGAAAAGATCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	22187417	22187095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_22187242_22187315
ENSMUSG00000006179.10_22187203_22187495_1	chr13	-	219	2	ISM	ENSMUSG00000006179.10	ENSMUST00000150547.3	1159	5	3087	482	3087	-107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGGACTGTCTGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	22187495	22187202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_22187242_22187315
ENSMUSG00000006179.10_22187436_22189404_1	chr13	-	204	2	ISM	ENSMUSG00000006179.10	ENSMUST00000150547.3	1159	5	1178	715	1178	-340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGCTGTGTGAACAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	22189404	22187435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_22187496_22189260
ENSMUSG00000006179.10_22187456_22193596_1	chr13	-	219	3	ISM	ENSMUSG00000006179.10	ENST00000421826.6	665	5	234	360	234	-360	internal_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTGCCCTTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	22193596	22187455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_22187496_22189260_22189403_22193559
ENSMUSG00000006191.18_29509284_29541530_1	chr13	-	1141	3	ISM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	498127	0	498116	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTTTATTGGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	29541530	29509283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_29510212_29538612_29538778_29541482
ENSMUSG00000006191.18_29509402_29658590_1	chr13	-	1201	5	ISM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	381067	118	381056	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCTGACACACCGACCA	NA	NA	NA	NA	NA	NA	NA	NA	29658590	29509401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511
ENSMUSG00000006191.18_29509593_29701445_1	chr13	-	1162	6	ISM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	338212	309	338201	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCTGTGTTTGGAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	29701445	29509592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395
ENSMUSG00000006191.18_29509753_29736286_1	chr13	-	1173	7	ISM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	303371	469	303360	-469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	29736286	29509752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211
ENSMUSG00000006191.18_29510017_29875673_1	chr13	-	1197	9	ISM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	163984	733	163973	-733	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAGCCTCCATAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	29875673	29510016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581
ENSMUSG00000006191.18_29538684_29961273_1	chr13	-	1180	11	ISM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	78384	29400	78373	-29400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAACCAGAGTGTATACA	NA	NA	NA	NA	NA	NA	NA	NA	29961273	29538683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199
ENSMUSG00000006191.18_29658519_30034091_1	chr13	-	1226	10	ISM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	5566	149235	5555	-149235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGGTGAGAGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	30034091	29658518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921
ENSMUSG00000006191.18_29658638_30038924_1	chr13	-	1151	11	ISM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	733	149354	722	-149354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCAGGATTTTCAAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	30038924	29658637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880
ENSMUSG00000006205.14_130537933_130587390_2	chr7	+	2036	9	NNC	ENSMUSG00000006205.14	novel	2041	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGCGTGCTTCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	130537932	130587390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_130538474_130563242_130563343_130563702_130563908_130581030_130581226_130581681_130581715_130583386_130583502_130583966_130584025_130585394_130585486_130586692
ENSMUSG00000006205.14_130537933_130587390_3	chr7	+	2035	9	NNC	ENSMUSG00000006205.14	novel	2041	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGCGTGCTTCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	130537932	130587390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_130538474_130563242_130563343_130563702_130563908_130581030_130581226_130581681_130581715_130583386_130583502_130583972_130584025_130585389_130585486_130586692
ENSMUSG00000006205.14_130537933_130587390_4	chr7	+	2036	9	NNC	ENSMUSG00000006205.14	novel	2041	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGCGTGCTTCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	130537932	130587390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_130538474_130563247_130563343_130563702_130563908_130581030_130581226_130581681_130581715_130583386_130583502_130583966_130584025_130585389_130585486_130586692
ENSMUSG00000006205.14_130537933_130587390_5	chr7	+	2032	9	NNC	ENSMUSG00000006205.14	novel	2041	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGCGTGCTTCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	130537932	130587390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_130538474_130563242_130563343_130563702_130563908_130581030_130581226_130581681_130581715_130583395_130583502_130583966_130584025_130585389_130585486_130586692
ENSMUSG00000006205.14_130537933_130587390_6	chr7	+	2036	9	NNC	ENSMUSG00000006205.14	novel	2041	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGCGTGCTTCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	130537932	130587390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_130538474_130563242_130563343_130563702_130563908_130581030_130581226_130581681_130581715_130583386_130583502_130583966_130584025_130585389_130585486_130586697
ENSMUSG00000006215.13_141172017_141191584_1	chr4	+	881	7	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	51	2950	51	-2950	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAGGAAGAGGGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	141172016	141191584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547
ENSMUSG00000006215.13_141189114_141191911_1	chr4	+	909	6	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	17148	2623	17148	-2623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATCCGCATCCACACGG	NA	NA	NA	NA	NA	NA	NA	NA	141189113	141191911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870
ENSMUSG00000006215.13_141189189_141191953_1	chr4	+	876	6	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	17223	2581	17223	-2581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGCAGCAAGGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	141189188	141191953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870
ENSMUSG00000006215.13_141189269_141191987_1	chr4	+	830	6	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	17303	2547	17303	-2547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGGCTCATGAGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	141189268	141191987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870
ENSMUSG00000006215.13_141189919_141192148_1	chr4	+	814	6	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	17953	2386	17953	-2386	internal_fragment	TRUE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCCTGCTGAACCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	141189918	141192148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099
ENSMUSG00000006215.13_141189972_141192201_1	chr4	+	814	6	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	18006	2333	18006	-2333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGGGGACTGTGGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	141189971	141192201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099
ENSMUSG00000006215.13_141190020_141192358_1	chr4	+	923	6	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	18054	2176	18054	-2176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAACACAAGTGTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	141190019	141192358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099
ENSMUSG00000006215.13_141190983_141192747_1	chr4	+	898	5	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	19017	1787	19017	-1787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCCCAGAGCACCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	141190982	141192747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659
ENSMUSG00000006215.13_141191624_141193090_1	chr4	+	873	6	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	19658	1444	19658	-1444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCGCCCATGTACGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	141191623	141193090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032
ENSMUSG00000006215.13_141191689_141193133_1	chr4	+	851	6	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	19723	1401	19723	-1401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAACGCTGTGGCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	141191688	141193133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032
ENSMUSG00000006215.13_141191764_141193379_1	chr4	+	888	7	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	19798	1155	19798	-1155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGGGGACCTGTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	141191763	141193379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287
ENSMUSG00000006215.13_141191990_141193748_1	chr4	+	872	7	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	20024	786	20024	-786	internal_fragment	TRUE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGGGCATCAAGATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	141191989	141193748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658
ENSMUSG00000006215.13_141192129_141193834_1	chr4	+	905	6	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	20163	700	20163	-700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGCAGCGACAGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	141192128	141193834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658
ENSMUSG00000006215.13_141192234_141193986_1	chr4	+	858	7	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	20268	548	20268	-548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCAGTGGGGGCCGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	141192233	141193986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193962
ENSMUSG00000006215.13_141192318_141194028_1	chr4	+	816	7	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	20352	506	20352	-506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAGCTGAGATCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	141192317	141194028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193962
ENSMUSG00000006215.13_141192380_141194203_1	chr4	+	828	8	ISM	ENSMUSG00000006215.13	ENSMUST00000006377.13	2722	16	20415	333	20414	-331	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGCCAATAGCCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	141192379	141194203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ENSMUSG00000006215.13_141192726_141194270_1	chr4	+	830	7	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	20760	264	20760	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATGCGGACTTCTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	141192725	141194270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193962_141194075_141194153
ENSMUSG00000006215.13_141192833_141194380_1	chr4	+	920	6	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	20867	154	20867	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACACTGGCAGAAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	141192832	141194380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193962_141194075_141194153
ENSMUSG00000006215.13_141193286_141194536_1	chr4	+	838	4	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	21320	-2	21320	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCCTGTGGTCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	141193285	141194536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141193419_141193658_141193869_141193962_141194075_141194153
ENSMUSG00000006215.13_141193286_141194536_2	chr4	+	816	4	ISM	ENSMUSG00000006215.13	ENSMUST00000006377.13	2722	16	21321	0	21320	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCCTGTGGTCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	141193285	141194536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141193419_141193658_141193869_141193984_141194075_141194153
ENSMUSG00000006219.13_141304358_141327235_1	chr4	-	2051	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	0	985	0	-985	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGTGGTGTACACGCT	NA	NA	NA	NA	NA	NA	NA	NA	141327235	141304357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ENSMUSG00000006221.8_141149253_141149883_1	chr4	+	127	2	ISM	ENSMUSG00000006221.8	ENST00000406363.2	578	3	199	1496	199	-1496	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCCTGAAGACATCATT	NA	NA	NA	NA	NA	NA	NA	NA	141149252	141149883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141149296_141149799
ENSMUSG00000006221.8_141149896_141151282_1	chr4	+	143	2	ISM	ENSMUSG00000006221.8	ENST00000406363.2	578	3	842	97	842	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATGGTAGCCTCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	141149895	141151282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141149946_141151189
ENSMUSG00000006262.16_88891203_88905069_1	chr5	+	1635	5	ISM	ENSMUSG00000006262.16	ENSMUST00000006424.8	2705	6	22473	779	22473	-779	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAGAGGATTAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	88891202	88905069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_88891330_88892915_88893010_88897383_88897518_88901018_88901183_88903953
ENSMUSG00000006262.16_88897420_88905324_1	chr5	+	1633	3	ISM	ENSMUSG00000006262.16	ENSMUST00000006424.8	2705	6	28690	524	28690	-524	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATTATTGGTGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	88897419	88905324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_88897518_88901018_88901183_88903953
ENSMUSG00000006273.15_69541298_69565900_1	chr8	+	2362	14	FSM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	0	463	0	-463	multi-exon	TRUE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAATTGAGACTTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	69541297	69565900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ENSMUSG00000006273.15_69541420_69565942_1	chr8	+	2282	14	FSM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	122	421	122	-421	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTACATCCCACCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	69541419	69565942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ENSMUSG00000006273.15_69541439_69566023_1	chr8	+	2344	14	FSM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	141	340	141	-340	multi-exon	FALSE	canonical	NA	NA	NA	NA	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACGACTTGCTTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	69541438	69566023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ENSMUSG00000006273.15_69554032_69566229_1	chr8	+	2337	12	ISM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	12734	134	12734	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTCTGTGCATTCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	69554031	69566229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ENSMUSG00000006273.15_69554096_69566363_1	chr8	+	2407	12	ISM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	12798	0	12798	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAATGACTCTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	69554095	69566363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ENSMUSG00000006288.9_51002872_51012807_1	chr14	-	1232	6	ISM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	10169	0	10145	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATAGTTCTGTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	51012807	51002871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747
ENSMUSG00000006288.9_51003081_51014887_1	chr14	-	1224	7	ISM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	8089	209	8065	-209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCTTCCTGAGTCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	51014887	51003080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014718
ENSMUSG00000006288.9_51003302_51018959_1	chr14	-	1225	9	ISM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	4017	430	3993	-430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTCCCCTGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	51018959	51003301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014718_51014870_51015213_51015426_51018931
ENSMUSG00000006288.9_51003412_51018994_1	chr14	-	1150	9	ISM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	3982	540	3958	-540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGCAGTCAAGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	51018994	51003411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014718_51014870_51015213_51015426_51018931
ENSMUSG00000006288.9_51003462_51019045_1	chr14	-	1151	9	ISM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	3931	590	3907	-590	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTGTGGAAACGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	51019045	51003461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014718_51014870_51015213_51015426_51018931
ENSMUSG00000006288.9_51004599_51022950_1	chr14	-	1209	9	ISM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	26	1727	2	-1727	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTAATAAGGAGGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	51022950	51004598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014718_51014870_51015213_51015426_51018931_51019065_51022894
ENSMUSG00000006288.9_51013826_51015426_1	chr14	-	1257	2	ISM	ENSMUSG00000006288.9	ENSMUST00000226768.2	2366	4	7526	919	7526	-919	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCTCCCCTCAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	51015426	51013825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_51014870_51015213
ENSMUSG00000006289.15_51153040_51153874_1	chr14	-	491	3	ISM	ENSMUSG00000006289.15	ENSMUST00000162177.8	1219	11	8271	-103	8271	103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGGCTGCTACTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	51153874	51153039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_51153356_51153608_51153708_51153798
ENSMUSG00000006289.15_51153143_51154161_1	chr14	-	479	4	ISM	ENSMUSG00000006289.15	ENSMUST00000162177.8	1219	11	7984	0	7984	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTAGGTTGTGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	51154161	51153142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070
ENSMUSG00000006289.15_51153143_51157248_1	chr14	-	946	9	ISM	ENSMUSG00000006289.15	ENSMUST00000162177.8	1219	11	4897	0	4897	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTAGGTTGTGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	51157248	51153142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072
ENSMUSG00000006289.15_51153245_51157506_1	chr14	-	964	10	ISM	ENSMUSG00000006289.15	ENSMUST00000162177.8	1219	11	4639	102	4639	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCCCTCTTCGCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	51157506	51153244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386
ENSMUSG00000006289.15_51155324_51162194_1	chr14	-	435	4	ISM	ENSMUSG00000006289.15	ENSMUST00000159292.8	3388	11	156	4273	-49	-2181	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGATCGTTTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	51162194	51155323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_51155389_51157072_51157249_51157386_51157507_51162120
ENSMUSG00000006299.14_74318999_74323847_1	chr1	-	1759	11	NNC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTGCATTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	74323847	74318998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320794_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ENSMUSG00000006299.14_74318999_74323847_2	chr1	-	1761	11	NNC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3068	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTGCATTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	74323847	74318998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322258_74322373_74323044_74323201_74323661
ENSMUSG00000006299.14_74318999_74323847_3	chr1	-	1762	11	NNC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTGCATTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	74323847	74318998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320974_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ENSMUSG00000006299.14_74318999_74323847_4	chr1	-	1758	11	NNC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTGCATTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	74323847	74318998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321322_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ENSMUSG00000006301.18_74328007_74329071_1	chr1	-	713	2	ISM	ENSMUSG00000006301.18	ENSMUST00000113796.8	11011	11	14449	595	14449	-595	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCAACCCCATCTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	74329071	74328006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74328678_74329029
ENSMUSG00000006301.18_74328191_74330627_1	chr1	-	763	5	ISM	ENSMUSG00000006301.18	ENSMUST00000113796.8	11011	11	12893	779	12893	-779	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCACCTCGGCCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	74330627	74328190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589
ENSMUSG00000006301.18_74328335_74331666_1	chr1	-	710	7	ISM	ENSMUSG00000006301.18	ENSMUST00000113796.8	11011	11	11854	923	11854	-923	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTCTGAAGGTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	74331666	74328334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615
ENSMUSG00000006301.18_74328459_74333161_1	chr1	-	800	10	ISM	ENSMUSG00000006301.18	ENSMUST00000113796.8	11011	11	10359	1047	10359	-1047	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTCAAGTAATCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	74333161	74328458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066
ENSMUSG00000006301.18_74328613_74334424_1	chr1	-	714	11	FSM	ENSMUSG00000006301.18	ENSMUST00000113796.8	11011	11	9096	1201	9096	-1201	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCACAGGCGCCCTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	74334424	74328612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356
ENSMUSG00000006301.18_74329030_74334531_1	chr1	-	756	10	ISM	ENSMUSG00000006301.18	ENSMUST00000113796.8	11011	11	8989	1618	8989	-1618	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTAGTTCCCTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	74334531	74329029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356
ENSMUSG00000006301.18_74329976_74343326_1	chr1	-	749	10	ISM	ENSMUSG00000006301.18	ENSMUST00000016309.16	2378	12	238	2570	194	-2564	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCTGGGAATAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	74343326	74329975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74343281
ENSMUSG00000006301.18_74331615_74343510_1	chr1	-	734	6	NNC	ENSMUSG00000006301.18	novel	11011	11	NA	NA	10	-4203	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTTGGAGACCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	74343510	74331614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334592_74343277
ENSMUSG00000006304.15_74275656_74307368_1	chr1	+	1430	10	NNC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATTTGTTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	74275655	74307368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_74275770_74275976_74276085_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ENSMUSG00000006304.15_74275656_74307368_2	chr1	+	1432	11	NNC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATTTGTTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	74275655	74307368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306936
ENSMUSG00000006304.15_74275656_74307368_5	chr1	+	1429	11	NNC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATTTGTTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	74275655	74307368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74302993_74303511_74303613_74306929
ENSMUSG00000006304.15_74275709_74302972_1	chr1	+	1023	8	ISM	ENSMUSG00000006304.15	ENSMUST00000006467.14	1404	10	33	4174	0	-4174	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGCACTACCACATTAA	NA	NA	NA	NA	NA	NA	NA	NA	74275708	74302972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901
ENSMUSG00000006311.9_30333041_30335666_1	chr7	-	1212	7	FSM	ENSMUSG00000006311.9	ENST00000402764.6	1434	7	277	-55	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCGAACCTGCGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	30335666	30333040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30333260_30333413_30333527_30334037_30334515_30334732_30334793_30334976_30335090_30335185_30335276_30335526
ENSMUSG00000006311.9_30333041_30335666_2	chr7	-	1209	7	NIC	ENSMUSG00000006311.9	novel	1434	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCGAACCTGCGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	30335666	30333040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_30333260_30333413_30333527_30334037_30334515_30334732_30334793_30334976_30335087_30335185_30335276_30335526
ENSMUSG00000006311.9_30333041_30335666_3	chr7	-	1122	6	FSM	ENSMUSG00000006311.9	ENST00000479824.5	1067	6	0	-55	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCGAACCTGCGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	30335666	30333040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30333260_30333413_30333527_30334037_30334515_30334732_30334793_30334976_30335090_30335526
ENSMUSG00000006311.9_30333412_30335795_1	chr7	-	1124	6	ISM	ENSMUSG00000006311.9	ENST00000402764.6	1434	7	148	316	-129	-316	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACAGCTCCCCTTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	30335795	30333411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30333527_30334037_30334515_30334732_30334793_30334976_30335090_30335185_30335276_30335526
ENSMUSG00000006311.9_30333453_30335866_1	chr7	-	1154	6	ISM	ENSMUSG00000006311.9	ENST00000402764.6	1434	7	77	357	77	-357	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATAGCCGCGAGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	30335866	30333452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30333527_30334037_30334515_30334732_30334793_30334976_30335090_30335185_30335276_30335526
ENSMUSG00000006311.9_30333500_30335920_1	chr7	-	1161	6	ISM	ENSMUSG00000006311.9	ENST00000402764.6	1434	7	23	404	23	-404	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTGCTCCACGACGGG	NA	NA	NA	NA	NA	NA	NA	NA	30335920	30333499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30333527_30334037_30334515_30334732_30334793_30334976_30335090_30335185_30335276_30335526
ENSMUSG00000006315.10_30427126_30428934_1	chr7	-	837	7	NNC	ENSMUSG00000006315.10	novel	870	7	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	30428934	30427125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_30427329_30427411_30427534_30427629_30427715_30427862_30427994_30428081_30428142_30428626_30428697_30428768
ENSMUSG00000006315.10_30427126_30428934_2	chr7	-	835	7	NNC	ENSMUSG00000006315.10	novel	870	7	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	30428934	30427125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_30427329_30427419_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
ENSMUSG00000006315.10_30427126_30428954_1	chr7	-	858	7	NNC	ENSMUSG00000006315.10	novel	870	7	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	30428954	30427125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_30427329_30427411_30427534_30427634_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
ENSMUSG00000006333.15_3706992_3709856_1	chr7	+	703	5	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6497	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTTTCCAGCTGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	3706991	3709856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_3707064_3707325_3707448_3707644_3707760_3708731_3708919_3709649
ENSMUSG00000006333.15_3706992_3709856_2	chr7	+	705	5	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTTTCCAGCTGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	3706991	3709856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_3707064_3707331_3707448_3707644_3707768_3708731_3708919_3709649
ENSMUSG00000006333.15_3707319_3709856_2	chr7	+	641	4	NNC	ENSMUSG00000006333.15	novel	914	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTTTCCAGCTGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	3707318	3709856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_3707448_3707649_3707768_3708731_3708919_3709649
ENSMUSG00000006333.15_3707363_3709896_1	chr7	+	637	4	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	3707362	3709896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_3707448_3707649_3707768_3708731_3708919_3709649
ENSMUSG00000006333.15_3707363_3709896_2	chr7	+	632	4	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	3707362	3709896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_3707448_3707644_3707768_3708731_3708919_3709659
ENSMUSG00000006335.17_3623334_3632578_1	chr7	-	805	6	FSM	ENSMUSG00000006335.17	ENSMUST00000108641.10	1166	6	350	11	305	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTATGTACACTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	3632578	3623333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_3623474_3623745_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
ENSMUSG00000006335.17_3623778_3632826_1	chr7	-	885	5	NNC	ENSMUSG00000006335.17	novel	1091	6	NA	NA	57	-441	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGGAGCCGAGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	3632826	3623777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_3623983_3624061_3624132_3627597_3627669_3631822_3632086_3632550
ENSMUSG00000006344.18_75425626_75444638_1	chr10	+	873	7	ISM	ENSMUSG00000006344.18	ENST00000398292.3	2094	12	98	6369	98	3403	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCACCTTGTAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	75425625	75444638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75425717_75438453_75438585_75438807_75438904_75439800_75439997_75440476_75440635_75441089_75441237_75444584
ENSMUSG00000006344.18_75438533_75445070_1	chr10	+	824	7	ISM	ENSMUSG00000006344.18	ENST00000398292.3	2094	12	13005	5937	13005	3835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCATCCGCCAGCAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	75438532	75445070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75438585_75438807_75438904_75439800_75439997_75440476_75440635_75441089_75441237_75444584_75444722_75445032
ENSMUSG00000006344.18_75438805_75445226_1	chr10	+	931	6	ISM	ENSMUSG00000006344.18	ENST00000398292.3	2094	12	13277	5781	13277	3991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGGACCTGGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	75438804	75445226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75438904_75439800_75439997_75440476_75440635_75441089_75441237_75444584_75444722_75445032
ENSMUSG00000006344.18_75439798_75445785_1	chr10	+	942	6	ISM	ENSMUSG00000006344.18	ENST00000398292.3	2094	12	14270	5222	14270	4550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGCAAGGCCTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	75439797	75445785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75439997_75440476_75440635_75441089_75441237_75444584_75444722_75445032_75445227_75445678
ENSMUSG00000006344.18_75439915_75445922_1	chr10	+	866	7	ISM	ENSMUSG00000006344.18	ENST00000398292.3	2094	12	14387	5085	14387	4687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGATGCTTCTCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	75439914	75445922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75439997_75440476_75440635_75441089_75441237_75444584_75444722_75445032_75445227_75445678_75445786_75445881
ENSMUSG00000006344.18_75440565_75446301_1	chr10	+	879	7	ISM	ENSMUSG00000006344.18	ENST00000398292.3	2094	12	15037	4706	15037	-4706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTATCGCATCTCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	75440564	75446301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75440635_75441089_75441237_75444584_75444722_75445032_75445227_75445678_75445786_75445881_75446066_75446261
ENSMUSG00000006344.18_75441127_75450578_1	chr10	+	858	7	ISM	ENSMUSG00000006344.18	ENST00000398292.3	2094	12	15599	429	15599	-429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGGACCGAGGCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	75441126	75450578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75441237_75444584_75444722_75445032_75445227_75445678_75445786_75445881_75446066_75446261_75446373_75450563
ENSMUSG00000006344.18_75441192_75450627_1	chr10	+	842	7	ISM	ENSMUSG00000006344.18	ENST00000398292.3	2094	12	15664	380	15664	-380	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGCGGTCCAGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	75441191	75450627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75441237_75444584_75444722_75445032_75445227_75445678_75445786_75445881_75446066_75446261_75446373_75450563
ENSMUSG00000006344.18_75444676_75450745_1	chr10	+	824	6	ISM	ENSMUSG00000006344.18	ENST00000398292.3	2094	12	19148	262	19148	-262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTACGAATGCTGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	75444675	75450745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75444722_75445032_75445227_75445678_75445786_75445881_75446066_75446261_75446373_75450563
ENSMUSG00000006344.18_75445106_75450857_1	chr10	+	817	5	ISM	ENSMUSG00000006344.18	ENST00000398292.3	2094	12	19578	150	19578	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGATGAATGACTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	75445105	75450857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75445227_75445678_75445786_75445881_75446066_75446261_75446373_75450563
ENSMUSG00000006344.18_75445142_75451019_1	chr10	+	943	5	ISM	ENSMUSG00000006344.18	ENST00000398292.3	2094	12	19614	-12	19614	12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTTGGTGGTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	75445141	75451019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75445227_75445678_75445786_75445881_75446066_75446261_75446373_75450563
ENSMUSG00000006345.11_75411910_75420737_1	chr10	+	814	7	ISM	ENSMUSG00000006345.11	ENSMUST00000006508.10	2167	13	2628	1279	114	-1124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGCCTGAATTCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	75411909	75420737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653
ENSMUSG00000006345.11_75414561_75421865_1	chr10	+	1351	9	NNC	ENSMUSG00000006345.11	novel	1356	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGAAGAGGCAAGATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	75414560	75421865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420636_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ENSMUSG00000006345.11_75414561_75421865_2	chr10	+	1356	9	FSM	ENSMUSG00000006345.11	ENST00000412448.5	1356	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGAAGAGGCAAGATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	75414560	75421865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420631_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ENSMUSG00000006345.11_75414707_75421260_1	chr10	+	820	7	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	146	-601	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAAGGACGGCCAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	75414706	75421260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75421021_75421120_75421220
ENSMUSG00000006345.11_75415090_75421455_1	chr10	+	845	7	ISM	ENSMUSG00000006345.11	ENST00000405188.8	1508	11	3294	410	529	-406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAAGAGAGCTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	75415089	75421455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75421021_75421120_75421220_75421334_75421424
ENSMUSG00000006345.11_75415154_75421492_1	chr10	+	818	7	ISM	ENSMUSG00000006345.11	ENST00000405188.8	1508	11	3358	373	593	-369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTTTTACCTAATACCA	NA	NA	NA	NA	NA	NA	NA	NA	75415153	75421492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75421021_75421120_75421220_75421334_75421424
ENSMUSG00000006345.11_75416356_75421749_1	chr10	+	817	7	ISM	ENSMUSG00000006345.11	ENST00000405188.8	1508	11	4560	116	1795	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAAGTCACGCCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	75416355	75421749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75416488_75417130_75417268_75420653_75420842_75421021_75421120_75421220_75421334_75421424_75421539_75421714
ENSMUSG00000006345.11_75416390_75421819_1	chr10	+	853	7	ISM	ENSMUSG00000006345.11	ENST00000405188.8	1508	11	4594	46	1829	-42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCAGACTCCAGAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	75416389	75421819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75416488_75417130_75417268_75420653_75420842_75421021_75421120_75421220_75421334_75421424_75421539_75421714
ENSMUSG00000006345.11_75416448_75421865_1	chr10	+	841	7	ISM	ENSMUSG00000006345.11	ENST00000405188.8	1508	11	4652	0	1887	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGAAGAGGCAAGATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	75416447	75421865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75416488_75417130_75417268_75420653_75420842_75421021_75421120_75421220_75421334_75421424_75421539_75421714
ENSMUSG00000006345.11_75420661_75421865_1	chr10	+	773	4	NNC	ENSMUSG00000006345.11	novel	809	4	NA	NA	31	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGAAGAGGCAAGATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	75420660	75421865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_75420842_75420991_75421120_75421225_75421539_75421714
ENSMUSG00000006345.11_75420661_75421865_2	chr10	+	778	4	FSM	ENSMUSG00000006345.11	ENST00000404223.5	809	4	31	0	31	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGAAGAGGCAAGATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	75420660	75421865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_75420842_75420991_75421120_75421220_75421539_75421714
ENSMUSG00000006345.11_75420744_75421865_1	chr10	+	693	4	NNC	ENSMUSG00000006345.11	novel	809	4	NA	NA	114	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	1364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGAAGAGGCAAGATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	75420743	75421865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_75420842_75420991_75421120_75421220_75421539_75421716
ENSMUSG00000006356.11_113103856_113109126_1	chr12	+	1434	7	NNC	ENSMUSG00000006356.11	novel	1439	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	18034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTGTCGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	113103855	113109126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_113104235_113107078_113107232_113107634_113107776_113107848_113107918_113108023_113108114_113108429_113108488_113108582
ENSMUSG00000006356.11_113103856_113109126_2	chr12	+	1434	7	NNC	ENSMUSG00000006356.11	novel	1439	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	18034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTGTCGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	113103855	113109126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_113104235_113107083_113107232_113107634_113107776_113107848_113107918_113108018_113108114_113108429_113108488_113108582
ENSMUSG00000006356.11_113103856_113109126_3	chr12	+	1432	7	NNC	ENSMUSG00000006356.11	novel	1439	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	18034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTGTCGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	113103855	113109126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_113104235_113107078_113107232_113107634_113107776_113107855_113107918_113108018_113108114_113108429_113108488_113108582
ENSMUSG00000006360.12_113115632_113117499_1	chr12	+	440	5	NNC	ENSMUSG00000006360.12	novel	445	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTGTTTTTGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	113115631	113117499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_113115774_113116900_113116996_113117081_113117133_113117237_113117285_113117394
ENSMUSG00000006360.12_113115632_113117499_2	chr12	+	442	5	NNC	ENSMUSG00000006360.12	novel	445	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTGTTTTTGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	113115631	113117499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_113115774_113116905_113116996_113117074_113117133_113117237_113117285_113117394
ENSMUSG00000006369.15_85106120_85128508_1	chr15	+	1588	13	NNC	ENSMUSG00000006369.15	novel	1591	13	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	1122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCCCTGGGGCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	85106119	85128508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_85106211_85108450_85108587_85111168_85111320_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121809_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383
ENSMUSG00000006369.15_85106120_85128508_2	chr15	+	1583	13	NNC	ENSMUSG00000006369.15	novel	1591	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1068	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCCCTGGGGCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	85106119	85128508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_85106211_85108450_85108587_85111168_85111320_85113760_85113812_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383
ENSMUSG00000006369.15_85106120_85128508_3	chr15	+	1584	13	NNC	ENSMUSG00000006369.15	novel	1591	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCCCTGGGGCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	85106119	85128508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_85106211_85108450_85108587_85111168_85111320_85113765_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383
ENSMUSG00000006369.15_85106120_85128508_4	chr15	+	1589	13	FSM	ENSMUSG00000006369.15	ENST00000442170.6	1591	13	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCCCTGGGGCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	85106119	85128508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_85106211_85108450_85108587_85111168_85111320_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383
ENSMUSG00000006369.15_85106120_85128508_5	chr15	+	1583	13	NNC	ENSMUSG00000006369.15	novel	1591	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCCCTGGGGCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	85106119	85128508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_85106205_85108450_85108587_85111168_85111320_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383
ENSMUSG00000006369.15_85106120_85128508_6	chr15	+	1587	13	NNC	ENSMUSG00000006369.15	novel	1591	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	904	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCCCTGGGGCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	85106119	85128508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_85106211_85108450_85108587_85111168_85111320_85113760_85113818_85114999_85115102_85115617_85115756_85116741_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383
ENSMUSG00000006369.15_85108522_85113805_1	chr15	+	282	3	ISM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	18316	22281	2404	-14702	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCTGTCGAGGTGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	85108521	85113805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85108587_85111168_85111341_85113760
ENSMUSG00000006369.15_85126284_85135701_1	chr15	+	240	3	ISM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	36078	385	20166	-385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAACCTACTACCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	85126283	85135701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85126344_85128383_85128508_85135645
ENSMUSG00000006369.15_85128427_85135824_1	chr15	+	260	2	ISM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	38221	262	22309	-262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGGCTTTTTCACCACT	NA	NA	NA	NA	NA	NA	NA	NA	85128426	85135824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85128508_85135645
ENSMUSG00000006373.11_35861859_35869446_1	chrX	+	1415	2	FSM	ENSMUSG00000006373.11	ENST00000535419.2	1711	2	11	285	0	-285	multi-exon	FALSE	canonical	NA	NA	NA	NA	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAATCCTTCTGTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	35861858	35869446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_35862268_35868440
ENSMUSG00000006373.11_35862019_35865929_1	chrX	+	405	2	ISM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	160	3803	160	-3802	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCATTGCTTTATATTT	NA	NA	NA	NA	NA	NA	NA	NA	35862018	35865929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_35862268_35865773
ENSMUSG00000006373.11_35862019_35869526_1	chrX	+	1335	2	FSM	ENSMUSG00000006373.11	ENST00000535419.2	1711	2	171	205	160	-205	multi-exon	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTAATACTAAACCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	35862018	35869526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_35862268_35868440
ENSMUSG00000006373.11_35862122_35868493_1	chrX	+	355	3	FSM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	263	1239	263	-1238	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTCAGATGATGAAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	35862121	35868493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_35862268_35865773_35865930_35868440
ENSMUSG00000006373.11_35862150_35869732_1	chrX	+	1410	2	FSM	ENSMUSG00000006373.11	ENST00000535419.2	1711	2	302	-1	291	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGAGGCTTTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	35862149	35869732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_35862268_35868440
ENSMUSG00000006373.11_35862179_35868556_1	chrX	+	361	3	FSM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	320	1176	320	-1175	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATATCTATTTTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	35862178	35868556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_35862268_35865773_35865930_35868440
ENSMUSG00000006373.11_35862235_35868603_1	chrX	+	352	3	FSM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	376	1129	376	-1128	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTTTACAACATGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	35862234	35868603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_35862268_35865773_35865930_35868440
ENSMUSG00000006373.11_35865864_35868728_1	chrX	+	354	2	ISM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	4005	1004	4005	-1003	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCACAAATCCAGAAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	35865863	35868728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_35865930_35868440
ENSMUSG00000006378.16_78918130_78921357_1	chr15	+	928	8	ISM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	3056	1196	3056	-1196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTAGCTACCCTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	78918129	78921357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ENSMUSG00000006378.16_78918195_78921402_1	chr15	+	908	8	ISM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	3121	1151	3121	-1151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGATCTCAGCTGTACAC	NA	NA	NA	NA	NA	NA	NA	NA	78918194	78921402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ENSMUSG00000006378.16_78918241_78921458_1	chr15	+	918	8	ISM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	3167	1095	3167	-1095	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGGTGGGGCGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	78918240	78921458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ENSMUSG00000006378.16_78919534_78921673_1	chr15	+	933	6	ISM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	4460	880	4460	-880	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTCTGGGTAGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	78919533	78921673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ENSMUSG00000006378.16_78920080_78921819_1	chr15	+	906	5	ISM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	5006	734	5006	-734	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGGCAGTGGAGAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	78920079	78921819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ENSMUSG00000006378.16_78920512_78922012_1	chr15	+	919	3	ISM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	5438	541	5438	-541	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCTTGTTTTCCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	78920511	78922012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78920639_78920952_78921075_78921342
ENSMUSG00000006378.16_78920566_78922070_1	chr15	+	923	3	ISM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	5492	483	5492	-483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCAGTTTCCCCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	78920565	78922070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78920639_78920952_78921075_78921342
ENSMUSG00000006378.16_78921058_78922242_1	chr15	+	917	2	ISM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	5984	311	5984	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGGCCAGAAGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	78921057	78922242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78921075_78921342
ENSMUSG00000006386.16_94627526_94718256_1	chr4	+	1530	9	ISM	ENSMUSG00000006386.16	ENST00000519097.5	3759	21	83	44375	0	-44375	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTTGAAGCCAACAGACA	NA	NA	NA	NA	NA	NA	NA	NA	94627525	94718256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94627930_94686847_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718120
ENSMUSG00000006386.16_94627526_94747315_1	chr4	+	3135	16	ISM	ENSMUSG00000006386.16	ENST00000615002.4	4112	22	83	15316	0	-15316	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTCTTAGAACCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	94627525	94747315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94627930_94669052_94669365_94686847_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718082_94718256_94725353_94725642_94737857_94738158_94739959_94740115_94741605_94741817_94743558_94743670_94747124
ENSMUSG00000006386.16_94627755_94725641_1	chr4	+	1588	10	ISM	ENSMUSG00000006386.16	ENST00000519097.5	3759	21	312	36990	0	-36990	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTAGCTCGGGCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	94627754	94725641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94627930_94686847_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718120_94718256_94725353
ENSMUSG00000006386.16_94627755_94753682_1	chr4	+	3155	20	ISM	ENSMUSG00000006386.16	ENST00000615002.4	4112	22	312	8949	0	-8949	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGCGCGGAGCTCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	94627754	94753682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94627930_94669052_94669365_94686847_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718082_94718256_94725353_94725642_94737857_94738158_94739959_94740115_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659
ENSMUSG00000006386.16_94627755_94753722_1	chr4	+	3195	20	ISM	ENSMUSG00000006386.16	ENST00000615002.4	4112	22	312	8909	0	-8909	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAGAAGCCCCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	94627754	94753722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94627930_94669052_94669365_94686847_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718082_94718256_94725353_94725642_94737857_94738158_94739959_94740115_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659
ENSMUSG00000006386.16_94627910_94753759_1	chr4	+	3077	20	ISM	ENSMUSG00000006386.16	ENST00000615002.4	4112	22	467	8872	155	-8872	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGGCCTCACCGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	94627909	94753759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94627930_94669052_94669365_94686847_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718082_94718256_94725353_94725642_94737857_94738158_94739959_94740115_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659
ENSMUSG00000006386.16_94669052_94761378_1	chr4	+	3155	20	ISM	ENSMUSG00000006386.16	ENST00000615002.4	4112	22	41609	1253	41297	-1253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGCACAATTTAATACAG	NA	NA	NA	NA	NA	NA	NA	NA	94669051	94761378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94669365_94686847_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718082_94718256_94725353_94725642_94737857_94738158_94739959_94740115_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659_94753757_94761278
ENSMUSG00000006386.16_94669173_94762224_1	chr4	+	3098	21	ISM	ENSMUSG00000006386.16	ENST00000615002.4	4112	22	41730	407	41418	-407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGCCTAGAGCAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	94669172	94762224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94669365_94686847_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718082_94718256_94725353_94725642_94737857_94738158_94739959_94740115_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659_94753757_94761278_94761379_94762160
ENSMUSG00000006386.16_94669271_94762338_1	chr4	+	3114	21	ISM	ENSMUSG00000006386.16	ENST00000615002.4	4112	22	41828	293	41516	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTATATATTGTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	94669270	94762338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94669365_94686847_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718082_94718256_94725353_94725642_94737857_94738158_94739959_94740115_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659_94753757_94761278_94761379_94762160
ENSMUSG00000006386.16_94669322_94762393_1	chr4	+	3118	21	ISM	ENSMUSG00000006386.16	ENST00000615002.4	4112	22	41879	238	41567	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGTTCTGACTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	94669321	94762393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94669365_94686847_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718082_94718256_94725353_94725642_94737857_94738158_94739959_94740115_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659_94753757_94761278_94761379_94762160
ENSMUSG00000006386.16_94686872_94737956_1	chr4	+	1488	10	ISM	ENSMUSG00000006386.16	ENST00000406359.8	3812	22	59167	24675	59117	-24675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCATCCGGTATAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	94686871	94737956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718120_94718256_94725353_94725642_94737857
ENSMUSG00000006386.16_94686933_94738003_1	chr4	+	1474	10	ISM	ENSMUSG00000006386.16	ENST00000406359.8	3812	22	59228	24628	59178	-24628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTGAAGATCAAGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	94686932	94738003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718120_94718256_94725353_94725642_94737857
ENSMUSG00000006386.16_94687363_94762631_1	chr4	+	3203	19	ISM	ENSMUSG00000006386.16	ENST00000615002.4	4112	22	59920	0	59608	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTAAAATAAGCATTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	94687362	94762631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94687517_94692521_94692654_94693049_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718082_94718256_94725353_94725642_94737857_94738158_94739959_94740115_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659_94753757_94761278_94761379_94762160
ENSMUSG00000006386.16_94692522_94740111_1	chr4	+	1601	9	ISM	ENSMUSG00000006386.16	ENST00000406359.8	3812	22	64817	22520	64767	-22520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAGTATCTCATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	94692521	94740111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94692654_94693049_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718120_94718256_94725353_94725642_94737857_94738158_94739959
ENSMUSG00000006386.16_94693080_94741688_1	chr4	+	1522	9	ISM	ENSMUSG00000006386.16	ENST00000519097.5	3759	21	65637	20943	65325	-20943	internal_fragment	TRUE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGCTTGACTGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	94693079	94741688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718120_94718256_94725353_94725642_94737857_94738158_94739959_94740112_94741605
ENSMUSG00000006386.16_94693080_94741764_1	chr4	+	1598	9	ISM	ENSMUSG00000006386.16	ENST00000519097.5	3759	21	65637	20867	65325	-20867	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCATCAAGAAGGATGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	94693079	94741764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718120_94718256_94725353_94725642_94737857_94738158_94739959_94740112_94741605
ENSMUSG00000006386.16_94708409_94743611_1	chr4	+	1504	9	ISM	ENSMUSG00000006386.16	ENSMUST00000071168.6	4176	23	80654	19308	80654	-19020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGGACACCATCC	NA	NA	NA	NA	NA	NA	NA	NA	94708408	94743611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94708473_94715492_94715638_94715906_94716063_94718120_94718256_94725353_94725642_94737857_94738158_94739959_94740112_94741605_94741817_94743558
ENSMUSG00000006386.16_94715501_94747144_1	chr4	+	1510	9	ISM	ENSMUSG00000006386.16	ENSMUST00000071168.6	4176	23	87746	15775	87746	-15487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATGCCCCGCATGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	94715500	94747144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94715638_94715906_94716063_94718120_94718256_94725353_94725642_94737857_94738158_94739959_94740112_94741605_94741817_94743558_94743670_94747124
ENSMUSG00000006386.16_94715565_94747202_1	chr4	+	1504	9	ISM	ENSMUSG00000006386.16	ENSMUST00000071168.6	4176	23	87810	15717	87810	-15429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCCTGCTTTTGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	94715564	94747202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94715638_94715906_94716063_94718120_94718256_94725353_94725642_94737857_94738158_94739959_94740112_94741605_94741817_94743558_94743670_94747124
ENSMUSG00000006386.16_94715943_94747825_1	chr4	+	1526	9	ISM	ENSMUSG00000006386.16	ENSMUST00000071168.6	4176	23	88188	15094	88188	-14806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCCAGAAACATTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	94715942	94747825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94716063_94718120_94718256_94725353_94725642_94737857_94738158_94739959_94740112_94741605_94741817_94743558_94743670_94747124_94747316_94747807
ENSMUSG00000006386.16_94716007_94747869_1	chr4	+	1506	9	ISM	ENSMUSG00000006386.16	ENSMUST00000071168.6	4176	23	88252	15050	88252	-14762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATTTTGGATTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	94716006	94747869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94716063_94718120_94718256_94725353_94725642_94737857_94738158_94739959_94740112_94741605_94741817_94743558_94743670_94747124_94747316_94747807
ENSMUSG00000006386.16_94718119_94751920_1	chr4	+	1575	9	ISM	ENSMUSG00000006386.16	ENSMUST00000071168.6	4176	23	90364	10999	90364	-10711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAAACACTTTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	94718118	94751920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94718256_94725353_94725642_94737857_94738158_94739959_94740112_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849
ENSMUSG00000006386.16_94725509_94762177_1	chr4	+	1538	12	ISM	ENSMUSG00000006386.16	ENSMUST00000071168.6	4176	23	97754	742	97754	-454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTATGAGAAGTTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	94725508	94762177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94725642_94737857_94738158_94739959_94740112_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659_94753757_94761278_94761379_94762160
ENSMUSG00000006386.16_94725589_94762207_1	chr4	+	1488	12	ISM	ENSMUSG00000006386.16	ENSMUST00000071168.6	4176	23	97834	712	97834	-424	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCTCTGCGGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	94725588	94762207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94725642_94737857_94738158_94739959_94740112_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659_94753757_94761278_94761379_94762160
ENSMUSG00000006386.16_94737936_94762336_1	chr4	+	1481	11	NNC	ENSMUSG00000006386.16	novel	3759	21	NA	NA	110181	-295	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTATATATTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	94737935	94762336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_94738158_94739959_94740112_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751854_94751921_94752841_94752883_94753659_94753757_94761278_94761379_94762160
ENSMUSG00000006386.16_94737998_94762404_1	chr4	+	1492	11	ISM	ENSMUSG00000006386.16	ENSMUST00000071168.6	4176	23	110243	515	110243	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTAATGTGACTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	94737997	94762404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94738158_94739959_94740112_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659_94753757_94761278_94761379_94762160
ENSMUSG00000006386.16_94738056_94762452_1	chr4	+	1482	11	ISM	ENSMUSG00000006386.16	ENSMUST00000071168.6	4176	23	110301	467	110301	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAATGCCTGTTCGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	94738055	94762452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94738158_94739959_94740112_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659_94753757_94761278_94761379_94762160
ENSMUSG00000006386.16_94739957_94762631_1	chr4	+	1562	10	ISM	ENSMUSG00000006386.16	ENSMUST00000071168.6	4176	23	112202	288	112202	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTAAAATAAGCATTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	94739956	94762631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94740112_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659_94753757_94761278_94761379_94762160
ENSMUSG00000006390.16_118285290_118289469_1	chr4	+	1130	8	FSM	ENSMUSG00000006390.16	ENSMUST00000006557.13	1811	8	0	681	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCACTGTTCCCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	118285289	118289469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_118285413_118287692_118287753_118287911_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ENSMUSG00000006390.16_118285290_118289812_1	chr4	+	1386	7	NNC	ENSMUSG00000006390.16	novel	1425	7	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGTGTGTGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	118285289	118289812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_118285413_118287692_118287753_118287911_118288103_118288462_118288520_118288605_118288712_118288793_118288931_118289100
ENSMUSG00000006390.16_118285290_118289812_2	chr4	+	1392	7	FSM	ENSMUSG00000006390.16	ENST00000413844.3	1425	7	33	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGTGTGTGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	118285289	118289812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_118285413_118287692_118287753_118287911_118288103_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ENSMUSG00000006390.16_118285290_118289812_3	chr4	+	1389	7	NNC	ENSMUSG00000006390.16	novel	1425	7	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGTGTGTGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	118285289	118289812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_118285413_118287692_118287753_118287911_118288103_118288462_118288520_118288605_118288712_118288796_118288931_118289094
ENSMUSG00000006390.16_118285371_118289469_1	chr4	+	1049	8	FSM	ENSMUSG00000006390.16	ENSMUST00000006557.13	1811	8	81	681	49	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCACTGTTCCCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	118285370	118289469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_118285413_118287692_118287753_118287911_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ENSMUSG00000006390.16_118285371_118289812_1	chr4	+	1311	7	FSM	ENSMUSG00000006390.16	ENST00000413844.3	1425	7	114	0	49	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGTGTGTGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	118285370	118289812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_118285413_118287692_118287753_118287911_118288103_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ENSMUSG00000006390.16_118287949_118289629_1	chr4	+	1070	6	ISM	ENSMUSG00000006390.16	ENSMUST00000067896.4	1137	8	1051	-160	1051	160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGTGGCCTTTCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	118287948	118289629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ENSMUSG00000006390.16_118288258_118289812_1	chr4	+	1101	5	ISM	ENSMUSG00000006390.16	ENSMUST00000067896.4	1137	8	1360	-343	1360	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGTGTGTGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	118288257	118289812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ENSMUSG00000006390.16_118288647_118289954_1	chr4	+	1062	3	ISM	ENSMUSG00000006390.16	ENSMUST00000067896.4	1137	8	1749	-485	1749	142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCTGTCTCAAAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	118288646	118289954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_118288712_118288793_118288931_118289094
ENSMUSG00000006390.16_118288832_118290150_1	chr4	+	1155	2	ISM	ENSMUSG00000006390.16	ENSMUST00000067896.4	1137	8	1934	-681	1934	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTTTGTTCAACGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	118288831	118290150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_118288931_118289094
ENSMUSG00000006392.17_118268076_118272308_1	chr4	+	1124	6	NNC	ENSMUSG00000006392.17	novel	1145	7	NA	NA	1513	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	118268075	118272308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_118268201_118268854_118269000_118269548_118269690_118269866_118269943_118270823_118271073_118271920
ENSMUSG00000006392.17_118268825_118272308_1	chr4	+	1035	5	ISM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	2262	0	2262	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	118268824	118272308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ENSMUSG00000006398.16_118290098_118294417_1	chr4	-	1655	10	NNC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	132	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	3613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGCATCCTTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	118294417	118290097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293171_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
ENSMUSG00000006398.16_118290098_118294417_2	chr4	-	1655	10	NNC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	132	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGCATCCTTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	118294417	118290097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_118290339_118290677_118290796_118291947_118292074_118292675_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
ENSMUSG00000006398.16_118290098_118294417_3	chr4	-	1661	10	FSM	ENSMUSG00000006398.16	ENSMUST00000006565.13	1793	10	132	0	132	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGCATCCTTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	118294417	118290097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
ENSMUSG00000006398.16_118290098_118294549_1	chr4	-	1787	10	NNC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGCATCCTTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	118294549	118290097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293171_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
ENSMUSG00000006412.11_171173238_171185838_1	chr1	+	751	4	FSM	ENSMUSG00000006412.11	ENSMUST00000135941.8	1735	4	0	984	0	-984	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAGGCAGATCTCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	171173237	171185838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185417
ENSMUSG00000006412.11_171184096_171185970_1	chr1	+	768	3	ISM	ENSMUSG00000006412.11	ENSMUST00000135941.8	1735	4	10858	852	10858	-852	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTTAATGGCTCACTAT	NA	NA	NA	NA	NA	NA	NA	NA	171184095	171185970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171184187_171184272_171184397_171185417
ENSMUSG00000006418.18_167334565_167356631_1	chr2	+	1546	8	FSM	ENSMUSG00000006418.18	ENSMUST00000109214.8	3001	8	0	1455	0	-1455	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCATCATTGACCAATGA	NA	NA	NA	NA	NA	NA	NA	NA	167334564	167356631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_167335264_167341730_167341886_167345356_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ENSMUSG00000006418.18_167334956_167356969_1	chr2	+	1493	8	FSM	ENSMUSG00000006418.18	ENSMUST00000109214.8	3001	8	391	1117	391	-1117	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCTCAGGTCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	167334955	167356969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_167335264_167341730_167341886_167345356_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ENSMUSG00000006418.18_167335040_167357058_1	chr2	+	1498	8	FSM	ENSMUSG00000006418.18	ENSMUST00000109214.8	3001	8	475	1028	475	-1028	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTTGGTTCTGCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	167335039	167357058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_167335264_167341730_167341886_167345356_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ENSMUSG00000006418.18_167341732_167357271_1	chr2	+	1486	7	ISM	ENSMUSG00000006418.18	ENSMUST00000109214.8	3001	8	7167	815	-3277	-815	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTGTAAGTAGGGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	167341731	167357271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_167341886_167345356_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ENSMUSG00000006418.18_167341765_167357339_1	chr2	+	1521	7	ISM	ENSMUSG00000006418.18	ENSMUST00000109214.8	3001	8	7200	747	-3244	-747	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGTGGCTGGGTCGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	167341764	167357339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_167341886_167345356_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ENSMUSG00000006418.18_167341843_167357397_1	chr2	+	1501	7	ISM	ENSMUSG00000006418.18	ENSMUST00000109214.8	3001	8	7278	689	-3166	-689	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTTGGAGGGAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	167341842	167357397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_167341886_167345356_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ENSMUSG00000006418.18_167345134_167356865_1	chr2	+	1149	6	FSM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	125	1228	125	-1221	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCATGGTCTGCTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	167345133	167356865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ENSMUSG00000006418.18_167345184_167356930_1	chr2	+	1164	6	FSM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	175	1163	175	-1156	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACAGGATCTTAATCGCA	NA	NA	NA	NA	NA	NA	NA	NA	167345183	167356930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ENSMUSG00000006418.18_167352843_167357789_1	chr2	+	1487	4	ISM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	7834	304	7834	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGCCTGCCAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	167352842	167357789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_167352903_167353131_167353247_167354436_167354545_167356585
ENSMUSG00000006418.18_167353182_167357912_1	chr2	+	1500	3	ISM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	8173	181	8173	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTCAACAAGACCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	167353181	167357912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_167353247_167354436_167354545_167356585
ENSMUSG00000006423.16_36113528_36117047_1	chrX	-	1446	3	ISM	ENSMUSG00000006423.16	ENST00000536133.2	673	6	10738	-1179	10738	1179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAATAGTTTTCTTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	36117047	36113527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_36114816_36116291_36116385_36116982
ENSMUSG00000006423.16_36113663_36118031_1	chrX	-	1432	4	ISM	ENSMUSG00000006423.16	ENST00000536133.2	673	6	9754	-1044	9754	1044	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTCTTCCATATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	36118031	36113662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935
ENSMUSG00000006423.16_36113932_36127808_1	chrX	-	1513	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	91	1736	-23	775	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGACAGCCCCAGCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	36127808	36113931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ENSMUSG00000006423.16_36114131_36127916_1	chrX	-	1422	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	-17	1935	-17	576	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGACTATGGTCTATGGT	NA	NA	NA	NA	NA	NA	NA	NA	36127916	36114130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ENSMUSG00000006442.11_148675960_148678316_1	chr4	+	744	5	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	0	760	0	-760	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGCTGCACCTGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	148675959	148678316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224
ENSMUSG00000006442.11_148675960_148678374_1	chr4	+	802	5	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	0	702	0	-702	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGGTGGACTACGCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	148675959	148678374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224
ENSMUSG00000006442.11_148676201_148678656_1	chr4	+	758	6	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	241	420	241	-420	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAAGGTGAGTGGCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	148676200	148678656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539
ENSMUSG00000006442.11_148676494_148678756_1	chr4	+	741	6	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	534	320	534	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTGAATCCAGGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	148676493	148678756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743
ENSMUSG00000006442.11_148676590_148678788_1	chr4	+	677	6	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	630	288	630	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGACCTCAATCGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	148676589	148678788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743
ENSMUSG00000006442.11_148676937_148678932_1	chr4	+	791	5	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	977	144	977	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	930	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTGGGTGGACTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	148676936	148678932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743
ENSMUSG00000006442.11_148677743_148678932_1	chr4	+	698	4	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	1783	144	1783	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTGGGTGGACTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	148677742	148678932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148677899_148678224_148678455_148678539_148678663_148678743
ENSMUSG00000006442.11_148677823_148679076_1	chr4	+	762	4	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	1863	0	1863	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1020	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCATTTTTGTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	148677822	148679076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148677899_148678224_148678455_148678539_148678663_148678743
ENSMUSG00000006456.11_4850597_4853591_1	chr19	-	2250	2	ISM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	8071	0	7949	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGGATGGTTCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	4853591	4850596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4851834_4852578
ENSMUSG00000006456.11_4850597_4853643_1	chr19	-	2302	2	ISM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	8019	0	7897	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGGATGGTTCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	4853643	4850596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4851834_4852578
ENSMUSG00000006456.11_4850807_4853809_1	chr19	-	2258	2	ISM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	7853	210	7731	143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACCAATGGAATTAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	4853809	4850806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4851834_4852578
ENSMUSG00000006456.11_4851540_4861613_1	chr19	-	2173	3	FSM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	49	943	0	265	multi-exon	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACCTCTCCCAATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	4861613	4851539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4851834_4852578_4854044_4861199
ENSMUSG00000006456.11_4853790_4861386_1	chr19	-	493	2	FSM	ENSMUSG00000006456.11	ENST00000443702.1	715	2	222	0	154	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGGGCAAGCCCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	4861386	4853789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4854096_4861199
ENSMUSG00000006457.5_4911251_4912383_1	chr19	-	538	4	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	15554	7	15554	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTTTTTGTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4912383	4911250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4911532_4911612_4911772_4912197_4912264_4912351
ENSMUSG00000006457.5_4911482_4913226_1	chr19	-	486	5	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	14711	238	14711	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACTGCATCCGTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	4913226	4911481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4911532_4911612_4911772_4912197_4912264_4912351_4912499_4913162
ENSMUSG00000006457.5_4912197_4913586_1	chr19	-	543	4	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	14351	953	14351	-953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGCCATGGCCACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	4913586	4912196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4912264_4912351_4912499_4913162_4913343_4913437
ENSMUSG00000006457.5_4912431_4914102_1	chr19	-	487	4	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	13835	1187	13835	-1187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACTGACCCGAGATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	4914102	4912430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4912499_4913162_4913343_4913437_4913573_4913998
ENSMUSG00000006457.5_4913236_4914524_1	chr19	-	497	4	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	13413	1992	13413	-1992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGGGTGACCACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	4914524	4913235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4913343_4913437_4913573_4913998_4914182_4914452
ENSMUSG00000006457.5_4913997_4915347_1	chr19	-	456	4	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	12590	2753	12590	-2753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTAACCAGCAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4915347	4913996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4914182_4914452_4914594_4914680_4914790_4915326
ENSMUSG00000006457.5_4914138_4917632_1	chr19	-	509	5	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	10305	2894	10305	-2894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGATCGAGAGCGAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	4917632	4914137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4914182_4914452_4914594_4914680_4914790_4915326_4915478_4917568
ENSMUSG00000006457.5_4914566_4917885_1	chr19	-	481	5	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	10052	3322	10052	-3322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCTGCAGCTGGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	4917885	4914565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4914594_4914680_4914790_4915326_4915478_4917568_4917717_4917840
ENSMUSG00000006457.5_4914732_4917993_1	chr19	-	510	4	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	9944	3488	9944	-3488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGGATAACTTGGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	4917993	4914731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4914790_4915326_4915478_4917568_4917717_4917840
ENSMUSG00000006457.5_4915400_4918787_1	chr19	-	499	4	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	9150	4156	9150	-4156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTTTGAGAGCGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	4918787	4915399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4915478_4917568_4917717_4917840_4918072_4918745
ENSMUSG00000006457.5_4917617_4919451_1	chr19	-	490	4	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	8486	6373	8486	-6373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGAAGTTCCAACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	4919451	4917616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4917717_4917840_4918072_4918745_4918839_4919385
ENSMUSG00000006457.5_4917896_4921161_1	chr19	-	489	5	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	6776	6652	6776	-6652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCGCCTGAGCCACCGAC	NA	NA	NA	NA	NA	NA	NA	NA	4921161	4917895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4918072_4918745_4918839_4919385_4919472_4920939_4921022_4921109
ENSMUSG00000006457.5_4918746_4921861_1	chr19	-	491	6	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	6076	7502	6076	-7502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCTGGGGCCGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	4921861	4918745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4918839_4919385_4919472_4920939_4921022_4921109_4921189_4921624_4921713_4921798
ENSMUSG00000006457.5_4919395_4922343_1	chr19	-	490	6	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	5594	8151	5594	-8151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGAGCAGGTAAAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	4922343	4919394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4919472_4920939_4921022_4921109_4921189_4921624_4921713_4921798_4921886_4922266
ENSMUSG00000006457.5_4920984_4922643_1	chr19	-	486	6	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	5294	9740	5294	-9740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGAGAAATACCTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	4922643	4920983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4921022_4921109_4921189_4921624_4921713_4921798_4921886_4922266_4922387_4922569
ENSMUSG00000006469.14_25119146_25122428_1	chr2	-	1448	10	ISM	ENSMUSG00000006469.14	ENST00000673835.1	1870	13	1799	83	1799	-83	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGCAGCAACTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	25122428	25119145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25119528_25120584_25120710_25120784_25120902_25120987_25121156_25121234_25121323_25121432_25121500_25121667_25121876_25121962_25122075_25122158_25122303_25122391
ENSMUSG00000006469.14_25119190_25122487_1	chr2	-	1463	10	ISM	ENSMUSG00000006469.14	ENST00000673835.1	1870	13	1740	127	1740	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGCCCTGGGACCGCC	NA	NA	NA	NA	NA	NA	NA	NA	25122487	25119189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25119528_25120584_25120710_25120784_25120902_25120987_25121156_25121234_25121323_25121432_25121500_25121667_25121876_25121962_25122075_25122158_25122303_25122391
ENSMUSG00000006469.14_25119208_25121063_1	chr2	-	638	4	ISM	ENSMUSG00000006469.14	ENST00000673835.1	1870	13	3164	145	3164	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTCTGGCTCCATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	25121063	25119207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25119528_25120584_25120710_25120784_25120902_25120987
ENSMUSG00000006469.14_25119350_25123356_1	chr2	-	1465	12	ISM	ENSMUSG00000006469.14	ENST00000673835.1	1870	13	871	287	871	-287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2010	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTCCCTGGCAGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	25123356	25119349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25119528_25120584_25120710_25120784_25120902_25120987_25121156_25121234_25121323_25121432_25121500_25121667_25121876_25121962_25122075_25122158_25122303_25122391_25122521_25122979_25123067_25123314
ENSMUSG00000006469.14_25119409_25123402_1	chr2	-	1452	12	ISM	ENSMUSG00000006469.14	ENST00000673835.1	1870	13	825	346	825	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1829	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGGCCATTGTCTACC	NA	NA	NA	NA	NA	NA	NA	NA	25123402	25119408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25119528_25120584_25120710_25120784_25120902_25120987_25121156_25121234_25121323_25121432_25121500_25121667_25121876_25121962_25122075_25122158_25122303_25122391_25122521_25122979_25123067_25123314
ENSMUSG00000006469.14_25119482_25123438_1	chr2	-	1415	12	ISM	ENSMUSG00000006469.14	ENST00000673835.1	1870	13	789	419	789	-419	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1795	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACCTGGTGCCTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	25123438	25119481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25119528_25120584_25120710_25120784_25120902_25120987_25121156_25121234_25121323_25121432_25121500_25121667_25121876_25121962_25122075_25122158_25122303_25122391_25122521_25122979_25123067_25123314
ENSMUSG00000006469.14_25121748_25123348_1	chr2	-	634	6	ISM	ENSMUSG00000006469.14	ENST00000673835.1	1870	13	879	2685	879	-2685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGGCAGCAGGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	25123348	25121747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25121876_25121962_25122075_25122158_25122303_25122391_25122521_25122979_25123067_25123314
ENSMUSG00000006469.14_25121793_25123405_1	chr2	-	646	6	ISM	ENSMUSG00000006469.14	ENST00000673835.1	1870	13	822	2730	822	-2730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAGAGAGACTGAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	25123405	25121792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25121876_25121962_25122075_25122158_25122303_25122391_25122521_25122979_25123067_25123314
ENSMUSG00000006469.14_25121976_25124200_1	chr2	-	592	6	ISM	ENSMUSG00000006469.14	ENST00000673835.1	1870	13	27	2913	27	-2913	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATTTCAGAGGTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	25124200	25121975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25122075_25122158_25122303_25122391_25122521_25122979_25123067_25123314_25123439_25124191
ENSMUSG00000006469.14_25122159_25124376_1	chr2	-	669	5	ISM	ENSMUSG00000006469.14	ENST00000673835.1	1870	13	-149	3096	0	-3096	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCACCTCTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	25124376	25122158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25122303_25122391_25122521_25122979_25123067_25123314_25123439_25124191
ENSMUSG00000006471.19_25137719_25145358_1	chr2	-	1774	14	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTTGCTAGCTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	25145358	25137718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138738_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ENSMUSG00000006471.19_25137719_25145358_2	chr2	-	1807	14	NNC	ENSMUSG00000006471.19	novel	1804	14	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTTGCTAGCTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	25145358	25137718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_25137867_25137971_25138083_25138129_25138253_25138347_25138495_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140112_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ENSMUSG00000006471.19_25137719_25145358_3	chr2	-	1810	14	NNC	ENSMUSG00000006471.19	novel	1804	14	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTTGCTAGCTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	25145358	25137718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_25137867_25137971_25138083_25138129_25138253_25138347_25138495_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140293_25140391_25141732_25141831_25144875_25144954_25145228
ENSMUSG00000006471.19_25137719_25145358_4	chr2	-	1812	14	FSM	ENSMUSG00000006471.19	ENST00000371521.8	1804	14	-7	-1	-7	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTTGCTAGCTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	25145358	25137718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_25137867_25137971_25138083_25138129_25138253_25138347_25138495_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ENSMUSG00000006471.19_25137719_25145358_5	chr2	-	1810	14	NNC	ENSMUSG00000006471.19	novel	1804	14	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTTGCTAGCTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	25145358	25137718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_25137867_25137971_25138083_25138129_25138253_25138347_25138495_25138643_25138759_25138916_25139025_25139113_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ENSMUSG00000006471.19_25137719_25145358_6	chr2	-	1809	14	NNC	ENSMUSG00000006471.19	novel	1804	14	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTTGCTAGCTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	25145358	25137718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_25137867_25137971_25138083_25138129_25138253_25138347_25138495_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145231
ENSMUSG00000006471.19_25137719_25145358_7	chr2	-	1810	14	NNC	ENSMUSG00000006471.19	novel	1804	14	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTTGCTAGCTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	25145358	25137718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_25137867_25137971_25138083_25138129_25138253_25138347_25138495_25138643_25138759_25138916_25139025_25139111_25139333_25139418_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ENSMUSG00000006471.19_25137719_25145358_8	chr2	-	1810	14	NNC	ENSMUSG00000006471.19	novel	1804	14	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTTGCTAGCTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	25145358	25137718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_25137867_25137971_25138083_25138129_25138253_25138349_25138495_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ENSMUSG00000006471.19_25137719_25145358_9	chr2	-	1808	14	NIC	ENSMUSG00000006471.19	novel	1804	14	NA	NA	-7	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTTGCTAGCTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	25145358	25137718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_25137867_25137971_25138083_25138133_25138253_25138347_25138495_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ENSMUSG00000006476.20_24944425_24952027_1	chr2	+	2027	15	FSM	ENSMUSG00000006476.20	ENSMUST00000006646.15	2922	15	29	866	0	-865	multi-exon	TRUE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCATTGACCTGTCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	24944424	24952027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_24944684_24945009_24945072_24945647_24946149_24947112_24947189_24948264_24948334_24949032_24949086_24949616_24949707_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504_24951581_24951683
ENSMUSG00000006476.20_24944480_24952081_1	chr2	+	2026	15	FSM	ENSMUSG00000006476.20	ENSMUST00000006646.15	2922	15	84	812	0	-811	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGGGTTCATAGAAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	24944479	24952081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_24944684_24945009_24945072_24945647_24946149_24947112_24947189_24948264_24948334_24949032_24949086_24949616_24949707_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504_24951581_24951683
ENSMUSG00000006476.20_24944480_24952129_1	chr2	+	2074	15	FSM	ENSMUSG00000006476.20	ENSMUST00000006646.15	2922	15	84	764	0	-763	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGGGAAGCAGCATTAC	NA	NA	NA	NA	NA	NA	NA	NA	24944479	24952129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_24944684_24945009_24945072_24945647_24946149_24947112_24947189_24948264_24948334_24949032_24949086_24949616_24949707_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504_24951581_24951683
ENSMUSG00000006476.20_24945023_24952283_1	chr2	+	2011	14	ISM	ENSMUSG00000006476.20	ENSMUST00000006646.15	2922	15	627	610	543	-609	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTAGCTCTGTCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	24945022	24952283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_24945072_24945647_24946149_24947112_24947189_24948264_24948334_24949032_24949086_24949616_24949707_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504_24951581_24951683
ENSMUSG00000006476.20_24945892_24952640_1	chr2	+	2075	13	ISM	ENSMUSG00000006476.20	ENSMUST00000006646.15	2922	15	1496	253	1412	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCACCCCAGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	24945891	24952640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_24946149_24947112_24947189_24948264_24948334_24949032_24949086_24949616_24949707_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504_24951581_24951683
ENSMUSG00000006476.20_24947159_24952893_1	chr2	+	2025	12	ISM	ENSMUSG00000006476.20	ENSMUST00000006646.15	2922	15	2763	0	2679	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGGGTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	24947158	24952893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_24947189_24948264_24948334_24949032_24949086_24949616_24949707_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504_24951581_24951683
ENSMUSG00000006494.12_71726076_71731901_1	chr2	+	1756	3	ISM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	22508	2301	22508	-2301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTCACTCTTGACATG	NA	NA	NA	NA	NA	NA	NA	NA	71726075	71731901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_71726144_71727990_71728105_71730327
ENSMUSG00000006498.17_79690261_79699033_1	chr10	+	1877	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	0	1233	0	-714	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCTGATTGAACTGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	79690260	79699033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79690439_79699145_1	chr10	+	1811	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	178	1121	-3	-602	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAGCCACTTTAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	79690438	79699145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79690467_79699747_2	chr10	+	1302	6	NNC	ENSMUSG00000006498.17	novel	1336	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCCCCTGAGCTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	79690466	79699747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_79690556_79697825_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79690467_79699747_5	chr10	+	1311	7	FSM	ENSMUSG00000006498.17	ENST00000627714.2	1336	7	25	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCCCCTGAGCTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	79690466	79699747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79690556_79692337_79692369_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79694828_79699266_1	chr10	+	1648	11	FSM	ENSMUSG00000006498.17	ENST00000394601.8	2174	11	45	481	45	-481	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGGCTTGGACCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	79694827	79699266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695971_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79694828_79699448_1	chr10	+	1851	11	ISM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	4567	818	45	-299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTATACATAGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	79694827	79699448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79694960_79699390_1	chr10	+	1640	11	FSM	ENSMUSG00000006498.17	ENST00000394601.8	2174	11	177	357	177	-357	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTACACCCACCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	79694959	79699390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695971_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79695036_79699415_1	chr10	+	1589	11	FSM	ENSMUSG00000006498.17	ENST00000394601.8	2174	11	253	332	253	-332	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGTTGTCTCTAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	79695035	79699415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695971_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79695186_79699747_1	chr10	+	1872	10	ISM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	4925	519	403	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCCCCTGAGCTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	79695185	79699747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79695233_79699523_1	chr10	+	1580	10	ISM	ENSMUSG00000006498.17	ENST00000394601.8	2174	11	450	224	450	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTCCCATGTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	79695232	79699523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79695357_79695435_79695547_79695614_79695790_79695971_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79695284_79699652_1	chr10	+	1658	10	ISM	ENSMUSG00000006498.17	ENST00000394601.8	2174	11	501	95	501	-95	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCCGAATCTTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	79695283	79699652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79695357_79695435_79695547_79695614_79695790_79695971_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79695484_79699888_1	chr10	+	1794	9	ISM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	5223	378	701	141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGGGGCTGACCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	79695483	79699888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79695484_79699949_1	chr10	+	1855	9	ISM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	5223	317	701	202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTGGGAGGGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	79695483	79699949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79695715_79700068_1	chr10	+	1811	8	ISM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	5454	198	932	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTTTGGTAACGACTA	NA	NA	NA	NA	NA	NA	NA	NA	79695714	79700068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79695950_79700193_1	chr10	+	1862	7	ISM	ENSMUSG00000006498.17	ENST00000394601.8	2174	11	1167	-446	1167	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTCCCTGAGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	79695949	79700193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006517.6_123160340_123161561_1	chr8	-	594	2	ISM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	8600	0	8600	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTGGGCTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	123161561	123160339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123160915_123161542
ENSMUSG00000006517.6_123160340_123161605_1	chr8	-	638	2	ISM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	8556	0	8556	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTGGGCTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	123161605	123160339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123160915_123161542
ENSMUSG00000006517.6_123160465_123163240_1	chr8	-	587	3	ISM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	6921	125	6921	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTCCTGGTGAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	123163240	123160464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123160915_123161542_123161652_123163212
ENSMUSG00000006517.6_123160614_123163807_1	chr8	-	585	4	ISM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	6354	274	6354	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCACTCCAGACAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	123163807	123160613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123160915_123161542_123161652_123163212_123163329_123163748
ENSMUSG00000006517.6_123160661_123163863_1	chr8	-	594	4	ISM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	6298	321	6298	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCCGCTGGTTTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	123163863	123160660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123160915_123161542_123161652_123163212_123163329_123163748
ENSMUSG00000006517.6_123160822_123164203_1	chr8	-	587	5	ISM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	5958	482	5958	-482	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTGCCATTTGGAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	123164203	123160821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123160915_123161542_123161652_123163212_123163329_123163748_123163968_123164153
ENSMUSG00000006517.6_123160857_123164585_1	chr8	-	597	6	ISM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	5576	517	5576	-517	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCCACAACGGGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	123164585	123160856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123160915_123161542_123161652_123163212_123163329_123163748_123163968_123164153_123164229_123164565
ENSMUSG00000006517.6_123161578_123164668_1	chr8	-	587	5	ISM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	5493	1238	5493	-1238	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGTGGGGTCCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	123164668	123161577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123161652_123163212_123163329_123163748_123163968_123164153_123164229_123164565
ENSMUSG00000006517.6_123161621_123164738_1	chr8	-	614	5	ISM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	5423	1281	5423	-1281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTCTGATGAGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	123164738	123161620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123161652_123163212_123163329_123163748_123163968_123164153_123164229_123164565
ENSMUSG00000006517.6_123163262_123166193_1	chr8	-	639	5	ISM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	3968	2922	3968	-2922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGCAGCTGTAAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	123166193	123163261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123163329_123163748_123163968_123164153_123164229_123164565_123164766_123166115
ENSMUSG00000006517.6_123163879_123166446_1	chr8	-	581	5	ISM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	3715	3539	3715	-3539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAAGGATAGCAACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	123166446	123163878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123163968_123164153_123164229_123164565_123164766_123166115_123166263_123166376
ENSMUSG00000006517.6_123163951_123166955_1	chr8	-	589	6	ISM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	3206	3611	3206	-3611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTGAGCGCATGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	123166955	123163950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123163968_123164153_123164229_123164565_123164766_123166115_123166263_123166376_123166492_123166920
ENSMUSG00000006517.6_123164597_123170135_1	chr8	-	605	5	ISM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	26	4257	26	-4257	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCCCAGCTCCGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	123170135	123164596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123164766_123166115_123166263_123166376_123166492_123166920_123166992_123170032
ENSMUSG00000006526.14_30588596_30597885_1	chr14	+	1998	5	ISM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	41049	1282	41049	-1282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCCCTAAGCCTAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	30588595	30597885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
ENSMUSG00000006526.14_30594544_30598219_1	chr14	+	1998	2	ISM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	46997	948	46997	-948	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTCCACTGAGCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	30594543	30598219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30594657_30596334
ENSMUSG00000006529.17_30651461_30664458_1	chr14	-	2469	18	NNC	ENSMUSG00000006529.17	novel	2593	18	NA	NA	122	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTAACACAGCAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	30664458	30651460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_30651597_30651746_30651859_30652197_30652371_30653117_30653320_30654156_30654271_30654358_30654437_30655283_30655470_30656063_30656204_30657239_30657424_30657671_30657854_30658659_30658786_30658912_30659082_30659713_30659831_30659915_30660042_30662828_30662943_30663438_30663602_30663880_30663986_30664416
ENSMUSG00000006529.17_30651461_30664558_1	chr14	-	2571	18	FSM	ENSMUSG00000006529.17	ENST00000273283.7	2593	18	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTAACACAGCAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	30664558	30651460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_30651597_30651746_30651859_30652197_30652371_30653117_30653320_30654156_30654271_30654358_30654437_30655283_30655470_30656063_30656204_30657237_30657424_30657671_30657854_30658659_30658786_30658912_30659082_30659713_30659831_30659915_30660042_30662828_30662943_30663438_30663602_30663880_30663986_30664416
ENSMUSG00000006567.12_22484667_22487621_1	chr8	-	618	4	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	31131	0	31131	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTCCTGGGCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	22487621	22484666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22484941_22485569_22485673_22487301_22487420_22487498
ENSMUSG00000006567.12_22484790_22488340_1	chr8	-	676	5	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	30412	123	30412	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAAGTGTCTCTGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	22488340	22484789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22484941_22485569_22485673_22487301_22487420_22487498_22487703_22488240
ENSMUSG00000006567.12_22487538_22494279_1	chr8	-	677	5	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	24473	2871	24473	-2871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCCATCGAAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	22494279	22487537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22487703_22488240_22488384_22490064_22490209_22492723_22492878_22494208
ENSMUSG00000006567.12_22487599_22494342_1	chr8	-	679	5	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	24410	2932	24410	-2932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAATGACTCCCCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	22494342	22487598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22487703_22488240_22488384_22490064_22490209_22492723_22492878_22494208
ENSMUSG00000006567.12_22487655_22494391_1	chr8	-	672	5	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	24361	2988	24361	-2988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGTCCAGGAGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	22494391	22487654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22487703_22488240_22488384_22490064_22490209_22492723_22492878_22494208
ENSMUSG00000006567.12_22488296_22496381_1	chr8	-	675	5	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	22371	3629	22371	-3629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTCTGATCACAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	22496381	22488295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22488384_22490064_22490209_22492723_22492878_22494208_22494392_22496275
ENSMUSG00000006567.12_22488353_22496431_1	chr8	-	668	5	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	22321	3686	22321	-3686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTCAAACCAGAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	22496431	22488352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22488384_22490064_22490209_22492723_22492878_22494208_22494392_22496275
ENSMUSG00000006567.12_22490135_22501095_1	chr8	-	671	5	ISM	ENSMUSG00000006567.12	ENST00000448424.7	4053	18	17657	5468	17657	-5468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGACATCAGTGACGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	22501095	22490134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22490209_22492723_22492878_22494208_22494392_22496275_22496471_22501030
ENSMUSG00000006567.12_22492745_22501054_1	chr8	-	340	3	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	17698	8078	17698	-8078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACCCTCCCACAGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	22501054	22492744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22492878_22494208_22494392_22501030
ENSMUSG00000006567.12_22492806_22501098_1	chr8	-	323	3	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	17654	8139	17654	-8139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGCAACGTGGAGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	22501098	22492805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22492878_22494208_22494392_22501030
ENSMUSG00000006567.12_22492807_22501610_1	chr8	-	674	5	ISM	ENSMUSG00000006567.12	ENST00000448424.7	4053	18	17142	8140	17142	-8140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAGCAACGTGGAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	22501610	22492806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22492878_22494208_22494392_22496275_22496471_22501030_22501166_22501520
ENSMUSG00000006567.12_22492848_22501159_1	chr8	-	342	3	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	17593	8181	17593	-8181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACTTCCAGGCAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	22501159	22492847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22492878_22494208_22494392_22501030
ENSMUSG00000006567.12_22494238_22501563_1	chr8	-	332	3	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	17189	9571	17189	-9571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGGCCGTCACTAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	22501563	22494237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22494392_22501030_22501166_22501520
ENSMUSG00000006567.12_22494297_22501614_1	chr8	-	324	3	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	17138	9630	17138	-9630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGAAGGTTCTGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	22501614	22494296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22494392_22501030_22501166_22501520
ENSMUSG00000006567.12_22494300_22501842_1	chr8	-	639	5	ISM	ENSMUSG00000006567.12	ENST00000448424.7	4053	18	16910	9633	16910	-9633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCTCAGGAAGGTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	22501842	22494299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22494392_22496275_22496471_22501030_22501166_22501520_22501676_22501780
ENSMUSG00000006567.12_22494350_22501670_1	chr8	-	327	3	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	17082	9683	17082	-9683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCCCCAGAGTCATGCG	NA	NA	NA	NA	NA	NA	NA	NA	22501670	22494349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22494392_22501030_22501166_22501520
ENSMUSG00000006567.12_22494350_22501840_1	chr8	-	452	4	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	16912	9683	16912	-9683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCCCCAGAGTCATGCG	NA	NA	NA	NA	NA	NA	NA	NA	22501840	22494349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22494392_22496275_22496471_22501520_22501676_22501780
ENSMUSG00000006567.12_22501619_22503451_1	chr8	-	337	4	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	15301	16952	15301	-16952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTCATGGCTCTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	22503451	22501618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22501676_22501780_22501909_22502726_22502819_22503391
ENSMUSG00000006567.12_22501644_22510821_1	chr8	-	459	5	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	7931	16977	7931	-16977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATAGTGATTGCTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	22510821	22501643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22501676_22501780_22501909_22502726_22502819_22508064_22508227_22510776
ENSMUSG00000006567.12_22501882_22503591_1	chr8	-	319	3	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	15161	17215	15161	-17215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCGAGGCGACGTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	22503591	22501881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22501909_22502726_22502819_22503391
ENSMUSG00000006567.12_22502759_22504586_1	chr8	-	352	3	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	14166	18092	14166	-18092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACCCTGGGTGAGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	22504586	22502758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22502819_22503391_22503626_22504528
ENSMUSG00000006567.12_22502767_22512387_1	chr8	-	453	4	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	6365	18100	6365	-18100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTCGTGACCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	22512387	22502766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22502819_22508064_22508227_22510776_22510941_22512312
ENSMUSG00000006567.12_22503490_22512526_1	chr8	-	676	4	ISM	ENSMUSG00000006567.12	ENST00000448424.7	4053	18	6226	18823	6226	-18823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGAGAAGGCAGAGAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	22512526	22503489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22503626_22508064_22508227_22510776_22510941_22512312
ENSMUSG00000006567.12_22504529_22508226_1	chr8	-	414	3	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	10526	19862	10526	-19862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTATTGGAAAGCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	22508226	22504528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22504704_22505893_22505971_22508064
ENSMUSG00000006567.12_22504582_22512390_1	chr8	-	603	5	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	6362	19915	6362	-19915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGACTGTCCGTTCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	22512390	22504581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22504704_22505893_22505971_22508064_22508227_22510776_22510941_22512312
ENSMUSG00000006567.12_22504640_22512454_1	chr8	-	609	5	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	6298	19973	6298	-19973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTAATCCCCAGCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	22512454	22504639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22504704_22505893_22505971_22508064_22508227_22510776_22510941_22512312
ENSMUSG00000006567.12_22508114_22512398_1	chr8	-	363	3	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	6354	23447	6354	-23447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCGATCCTGAAATTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	22512398	22508113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22508227_22510776_22510941_22512312
ENSMUSG00000006567.12_22508211_22517712_1	chr8	-	605	4	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	1040	23544	1040	-23544	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTCCTGTGTCCACAAC	NA	NA	NA	NA	NA	NA	NA	NA	22517712	22508210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22508227_22510776_22510941_22512312_22512571_22517545
ENSMUSG00000006567.12_22510850_22517814_1	chr8	-	618	3	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	938	26183	938	-26183	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGGACCTGGGCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	22517814	22510849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22510941_22512312_22512571_22517545
ENSMUSG00000006567.12_22512435_22517772_1	chr8	-	363	2	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	980	27768	980	-27768	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCAGAGACCCCATCAT	NA	NA	NA	NA	NA	NA	NA	NA	22517772	22512434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22512571_22517545
ENSMUSG00000006567.12_22512495_22517839_1	chr8	-	370	2	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	913	27828	913	-27828	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTGCAAAAAATGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	22517839	22512494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22512571_22517545
ENSMUSG00000006576.17_75523177_75534444_1	chr1	+	3727	22	FSM	ENSMUSG00000006576.17	ENST00000317151.7	3699	22	-28	0	-28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGCTGACGGCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	75523176	75534444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_75523258_75523474_75523566_75523876_75524043_75524587_75524866_75524959_75525076_75525512_75525710_75527147_75527297_75527398_75527580_75527890_75528027_75528280_75528465_75528796_75528897_75529266_75529452_75529899_75530126_75530267_75530487_75530803_75530953_75531145_75531341_75531566_75531786_75532054_75532145_75532582_75532750_75533387_75533642_75533916_75534087_75534270
ENSMUSG00000006585.4_123294890_123296154_1	chr8	+	372	3	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	136	3713	136	-3713	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGAGAATGCTGTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	123294889	123296154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123295011_123295825_123295985_123296062
ENSMUSG00000006585.4_123294947_123296214_1	chr8	+	375	3	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	193	3653	193	-3653	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCCTAGTGGGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	123294946	123296214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123295011_123295825_123295985_123296062
ENSMUSG00000006585.4_123296105_123297006_1	chr8	+	382	3	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	1351	2861	1351	-2861	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCCCACCTTCAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	123296104	123297006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123296215_123296642_123296841_123296932
ENSMUSG00000006585.4_123296168_123297053_1	chr8	+	366	3	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	1414	2814	1414	-2814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCGAGCCCTTGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	123296167	123297053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123296215_123296642_123296841_123296932
ENSMUSG00000006585.4_123296763_123298049_1	chr8	+	392	4	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	2009	1818	2009	-1818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGTGGACGAGGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	123296762	123298049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123296841_123296932_123297079_123297179_123297278_123297979
ENSMUSG00000006585.4_123297026_123298459_1	chr8	+	365	4	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	2272	1408	2272	-1408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCGCTCGGCTGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	123297025	123298459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123297079_123297179_123297278_123297979_123298169_123298434
ENSMUSG00000006585.4_123297984_123298703_1	chr8	+	366	3	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	3230	1164	3230	-1164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAAGGATGACACGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	123297983	123298703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123298169_123298434_123298588_123298675
ENSMUSG00000006585.4_123298032_123298764_1	chr8	+	379	3	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	3278	1103	3278	-1103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTGGCCCGCGTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	123298031	123298764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123298169_123298434_123298588_123298675
ENSMUSG00000006585.4_123298093_123298812_1	chr8	+	366	3	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	3339	1055	3339	-1055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACTCACTATGGAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	123298092	123298812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123298169_123298434_123298588_123298675
ENSMUSG00000006585.4_123298691_123299423_1	chr8	+	378	2	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	3937	444	3937	-444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACGACGCACTTACGCC	NA	NA	NA	NA	NA	NA	NA	NA	123298690	123299423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123298878_123299232
ENSMUSG00000006585.4_123298733_123299482_1	chr8	+	395	2	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	3979	385	3979	-385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCATAAAGTGCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	123298732	123299482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123298878_123299232
ENSMUSG00000006585.4_123298791_123299533_1	chr8	+	388	2	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	4037	334	4037	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTCAGCTCTAGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	123298790	123299533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123298878_123299232
ENSMUSG00000006589.9_123301374_123303557_1	chr8	-	779	5	FSM	ENSMUSG00000006589.9	ENSMUST00000006764.9	849	5	72	-2	72	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	123303557	123301373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253_123303361_123303491
ENSMUSG00000006589.9_123301374_123303583_1	chr8	-	796	5	NNC	ENSMUSG00000006589.9	novel	849	5	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	123303583	123301373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_123301767_123301875_123301955_123302140_123302262_123303249_123303361_123303491
ENSMUSG00000006589.9_123301374_123303583_2	chr8	-	799	5	NNC	ENSMUSG00000006589.9	novel	849	5	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	123303583	123301373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253_123303361_123303497
ENSMUSG00000006589.9_123301374_123303583_3	chr8	-	799	5	NNC	ENSMUSG00000006589.9	novel	849	5	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1944	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	123303583	123301373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_123301767_123301875_123301949_123302140_123302275_123303253_123303361_123303491
ENSMUSG00000006589.9_123301374_123303583_4	chr8	-	803	5	NNC	ENSMUSG00000006589.9	novel	849	5	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	123303583	123301373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_123301767_123301875_123301955_123302140_123302269_123303249_123303361_123303491
ENSMUSG00000006599.14_46445538_46473106_1	chr7	+	2413	14	NNC	ENSMUSG00000006599.14	novel	2524	14	NA	NA	-5	-115	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGCATGTGCTTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	46445537	46473106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_46445713_46451096_46451265_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ENSMUSG00000006599.14_46445538_46473122_1	chr7	+	2425	14	NNC	ENSMUSG00000006599.14	novel	2524	14	NA	NA	-5	-99	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAATTGCATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	46445537	46473122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_46445713_46451095_46451265_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462090_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ENSMUSG00000006599.14_46445538_46473224_1	chr7	+	2530	14	NNC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	46445537	46473224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_46445713_46451095_46451265_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461857_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ENSMUSG00000006599.14_46445538_46473224_2	chr7	+	2532	14	FSM	ENSMUSG00000006599.14	ENST00000534641.5	2524	14	-5	-3	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	46445537	46473224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_46445713_46451095_46451265_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ENSMUSG00000006599.14_46445538_46473224_3	chr7	+	2530	14	NNC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	46445537	46473224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_46445713_46451095_46451265_46454384_46454548_46456159_46456254_46457962_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ENSMUSG00000006599.14_46445649_46473224_1	chr7	+	2420	14	NNC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	106	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	46445648	46473224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_46445713_46451096_46451265_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ENSMUSG00000006599.14_46445658_46473224_1	chr7	+	2407	14	NNC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	115	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	46445657	46473224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_46445713_46451095_46451265_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462090_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ENSMUSG00000006599.14_46451111_46473224_1	chr7	+	2336	13	NNC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	5016	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	46451110	46473224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_46451265_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463545_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ENSMUSG00000006611.16_23889856_23892274_1	chr13	-	528	2	FSM	ENSMUSG00000006611.16	ENST00000317896.11	528	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTTGGGGTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	23892274	23889855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_23890120_23892010
ENSMUSG00000006641.13_31193803_31205095_1	chr5	-	2564	17	ISM	ENSMUSG00000006641.13	ENSMUST00000202556.4	3078	18	258	422	251	-422	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGATTTGGCAAGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	31205095	31193802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201926_31204973
ENSMUSG00000006649.18_30159854_30165448_1	chr7	+	1609	13	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	704	21200	107	-20693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAAAACCCCAGAGCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	30159853	30165448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30159965_30160038_30160162_30160328_30160458_30160940_30161023_30161398_30161503_30162026_30162155_30162239_30162412_30162576_30162735_30162936_30163082_30163202_30163328_30164890_30165078_30165176_30165307_30165433
ENSMUSG00000006649.18_30159903_30165501_1	chr7	+	1613	13	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	753	21147	156	-20640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCGGGTGTCATCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	30159902	30165501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30159965_30160038_30160162_30160328_30160458_30160940_30161023_30161398_30161503_30162026_30162155_30162239_30162412_30162576_30162735_30162936_30163082_30163202_30163328_30164890_30165078_30165176_30165307_30165433
ENSMUSG00000006649.18_30159954_30165555_1	chr7	+	1616	13	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	804	21093	207	-20586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAGGCACTTCGTGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	30159953	30165555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30159965_30160038_30160162_30160328_30160458_30160940_30161023_30161398_30161503_30162026_30162155_30162239_30162412_30162576_30162735_30162936_30163082_30163202_30163328_30164890_30165078_30165176_30165307_30165433
ENSMUSG00000006649.18_30160090_30166690_1	chr7	+	1651	13	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	940	19958	343	-19451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAGGGCCAGGCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	30160089	30166690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30160162_30160328_30160458_30160940_30161023_30161398_30161503_30162026_30162155_30162239_30162412_30162576_30162735_30162936_30163082_30163202_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644
ENSMUSG00000006649.18_30160442_30166899_1	chr7	+	1595	13	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	1292	19749	695	-19242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACTGCAGCTGTGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	30160441	30166899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30160458_30160940_30161023_30161398_30161503_30162026_30162155_30162239_30162412_30162576_30162735_30162936_30163082_30163202_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865
ENSMUSG00000006649.18_30160941_30167006_1	chr7	+	1686	12	ISM	ENSMUSG00000006649.18	ENST00000353632.6	3561	27	1194	19137	1194	-19135	internal_fragment	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCCCCCTCAGAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	30160940	30167006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30161023_30161398_30161503_30162026_30162155_30162239_30162412_30162576_30162735_30162936_30163082_30163202_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865
ENSMUSG00000006649.18_30161460_30167388_1	chr7	+	1604	12	ISM	ENSMUSG00000006649.18	ENST00000353632.6	3561	27	1713	18755	1713	-18753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTGCACCGTCGATG	NA	NA	NA	NA	NA	NA	NA	NA	30161459	30167388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30161503_30162026_30162155_30162239_30162412_30162576_30162735_30162936_30163082_30163202_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327
ENSMUSG00000006649.18_30162027_30170039_1	chr7	+	1647	12	ISM	ENSMUSG00000006649.18	ENST00000353632.6	3561	27	2280	16104	2280	-16102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACGACATGGAGAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	30162026	30170039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30162155_30162239_30162412_30162576_30162735_30162936_30163082_30163202_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014
ENSMUSG00000006649.18_30162109_30170071_1	chr7	+	1597	12	ISM	ENSMUSG00000006649.18	ENST00000353632.6	3561	27	2362	16072	2362	-16070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGCGTCTGCGGATTCG	NA	NA	NA	NA	NA	NA	NA	NA	30162108	30170071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30162155_30162239_30162412_30162576_30162735_30162936_30163082_30163202_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014
ENSMUSG00000006649.18_30162238_30170186_1	chr7	+	1668	11	ISM	ENSMUSG00000006649.18	ENST00000353632.6	3561	27	2491	15957	2491	-15955	internal_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTAACTTCGAGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	30162237	30170186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30162412_30162576_30162735_30162936_30163082_30163202_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014
ENSMUSG00000006649.18_30162238_30170302_1	chr7	+	1698	12	ISM	ENSMUSG00000006649.18	ENST00000353632.6	3561	27	2491	15841	2491	-15839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGAAAGTGGCTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	30162237	30170302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30162412_30162576_30162735_30162936_30163082_30163202_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272
ENSMUSG00000006649.18_30162394_30170399_1	chr7	+	1639	12	ISM	ENSMUSG00000006649.18	ENST00000353632.6	3561	27	2647	15744	2647	-15742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTCCCTCTGGATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	30162393	30170399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30162412_30162576_30162735_30162936_30163082_30163202_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272
ENSMUSG00000006649.18_30162672_30170577_1	chr7	+	1617	12	ISM	ENSMUSG00000006649.18	ENST00000353632.6	3561	27	2925	15566	2925	-15564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGCAGCCCAGGACTA	NA	NA	NA	NA	NA	NA	NA	NA	30162671	30170577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30162735_30162936_30163082_30163202_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516
ENSMUSG00000006649.18_30162995_30173770_1	chr7	+	1656	12	ISM	ENSMUSG00000006649.18	ENST00000353632.6	3561	27	3248	12373	3248	-12371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGCTTTGATGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	30162994	30173770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30163082_30163202_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701
ENSMUSG00000006649.18_30163268_30173946_1	chr7	+	1598	12	ISM	ENSMUSG00000006649.18	ENST00000353632.6	3561	27	3521	12197	3521	-12195	internal_fragment	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGCCACCACCTTCACAC	NA	NA	NA	NA	NA	NA	NA	NA	30163267	30173946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895
ENSMUSG00000006649.18_30164988_30177318_1	chr7	+	1607	12	ISM	ENSMUSG00000006649.18	ENST00000353632.6	3561	27	5241	8825	5241	-8823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCACAGAGCAGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	30164987	30177318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283
ENSMUSG00000006649.18_30165177_30181243_1	chr7	+	1634	12	NNC	ENSMUSG00000006649.18	novel	3877	29	NA	NA	5430	-4898	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGGGGAACCTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	30165176	30181243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30181148
ENSMUSG00000006649.18_30165255_30181440_1	chr7	+	1599	14	NIC	ENSMUSG00000006649.18	novel	3561	27	NA	NA	5508	-4701	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACTTCAGTCCCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	30165254	30181440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30181068_30181092_30181165_30181242_30181401
ENSMUSG00000006649.18_30165492_30181968_1	chr7	+	1623	14	NIC	ENSMUSG00000006649.18	novel	3561	27	NA	NA	5745	-4173	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTCTGGGGACCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	30165491	30181968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30181068_30181092_30181165_30181242_30181401_30181496_30181889
ENSMUSG00000006649.18_30166645_30186143_2	chr7	+	1679	14	NIC	ENSMUSG00000006649.18	novel	3561	27	NA	NA	6898	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCACGACACCTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	30166644	30186143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30181068_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009
ENSMUSG00000006673.15_108394286_108411093_1	chr9	+	852	4	ISM	ENSMUSG00000006673.15	ENST00000357496.6	3067	11	-9	26051	-9	-11195	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGGGGCCAGCAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	108394285	108411093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108394440_108395965_108396026_108405787_108406118_108410785
ENSMUSG00000006673.15_108394351_108411633_1	chr9	+	1391	4	ISM	ENSMUSG00000006673.15	ENSMUST00000006851.15	3331	11	38	25729	-4	-10655	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACAGTTCATGAATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	108394350	108411633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108394440_108395901_108396026_108405787_108406118_108410785
ENSMUSG00000006673.15_108395988_108411770_1	chr9	+	1353	3	ISM	ENSMUSG00000006673.15	ENST00000357496.6	3067	11	1693	25374	1633	-10518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCACCACCACAACAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	108395987	108411770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108396026_108405787_108406118_108410785
ENSMUSG00000006673.15_108405855_108418928_1	chr9	+	1337	3	ISM	ENSMUSG00000006673.15	ENSMUST00000193258.6	2291	6	11553	3591	11500	-3360	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGCCTTCACCAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	108405854	108418928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108406118_108410785_108411818_108418886
ENSMUSG00000006673.15_108405876_108419012_1	chr9	+	1400	3	ISM	ENSMUSG00000006673.15	ENSMUST00000193258.6	2291	6	11574	3507	11521	-3276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAATGCTGAACTAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	108405875	108419012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108406118_108410785_108411818_108418886
ENSMUSG00000006673.15_108406010_108433661_1	chr9	+	1752	7	ISM	ENSMUSG00000006673.15	ENST00000357496.6	3067	11	11715	3483	11655	-3483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCCGACAGACAAAGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	108406009	108433661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606
ENSMUSG00000006673.15_108411248_108434213_1	chr9	+	1336	7	ISM	ENSMUSG00000006673.15	ENST00000357496.6	3067	11	16953	2931	16893	-2931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAAGCTCTACGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	108411247	108434213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156
ENSMUSG00000006673.15_108411365_108436598_1	chr9	+	1407	8	ISM	ENSMUSG00000006673.15	ENST00000357496.6	3067	11	17070	546	17010	-546	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCATTGCCGTGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	108411364	108436598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ENSMUSG00000006673.15_108411730_108436922_1	chr9	+	1366	8	ISM	ENSMUSG00000006673.15	ENST00000357496.6	3067	11	17435	222	17375	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGGAGAGATACAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	108411729	108436922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ENSMUSG00000006673.15_108418939_108437031_1	chr9	+	1335	7	ISM	ENSMUSG00000006673.15	ENST00000357496.6	3067	11	24644	113	24584	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	108418938	108437031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ENSMUSG00000006673.15_108418995_108437090_1	chr9	+	1338	7	ISM	ENSMUSG00000006673.15	ENST00000357496.6	3067	11	24700	54	24640	-54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAATAAGGGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	108418994	108437090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ENSMUSG00000006673.15_108419631_108437191_1	chr9	+	1369	6	ISM	ENSMUSG00000006673.15	ENSMUST00000112155.9	3040	10	25322	0	25276	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGCGCTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	108419630	108437191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ENSMUSG00000006673.15_108422060_108437364_1	chr9	+	1389	5	ISM	ENSMUSG00000006673.15	ENSMUST00000006851.15	3331	11	27747	-2	27705	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	108422059	108437364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ENSMUSG00000006676.17_108367918_108370815_1	chr9	+	928	6	ISM	ENSMUSG00000006676.17	ENST00000453664.5	4726	27	22	8623	22	-8081	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGAGCTGTCTCCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	108367917	108370815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108368095_108369669_108369930_108370042_108370200_108370289_108370464_108370548_108370653_108370759
ENSMUSG00000006676.17_108368044_108370911_1	chr9	+	898	6	ISM	ENSMUSG00000006676.17	ENST00000453664.5	4726	27	148	8527	0	-7985	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTAGGCTCGGGGGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	108368043	108370911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108368095_108369669_108369930_108370042_108370200_108370289_108370464_108370548_108370653_108370759
ENSMUSG00000006676.17_108369892_108371269_1	chr9	+	831	6	ISM	ENSMUSG00000006676.17	ENST00000453664.5	4726	27	1996	8169	1837	-7627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCTCAGAGAAGAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	108369891	108371269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108369930_108370042_108370200_108370289_108370464_108370548_108370653_108370759_108371063_108371214
ENSMUSG00000006676.17_108370040_108371437_1	chr9	+	964	5	ISM	ENSMUSG00000006676.17	ENST00000453664.5	4726	27	2144	8001	1985	-7459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACATGGGGACTGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	108370039	108371437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108370200_108370289_108370464_108370548_108370653_108370759_108371063_108371214
ENSMUSG00000006676.17_108370150_108371602_1	chr9	+	891	6	ISM	ENSMUSG00000006676.17	ENST00000453664.5	4726	27	2254	7836	2095	-7294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTCGTATGAGAAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	108370149	108371602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108370200_108370289_108370464_108370548_108370653_108370759_108371063_108371214_108371438_108371565
ENSMUSG00000006676.17_108370358_108371897_1	chr9	+	965	6	ISM	ENSMUSG00000006676.17	ENST00000453664.5	4726	27	2462	7541	2303	-6999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGGTGCGCAGCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	108370357	108371897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108370464_108370548_108370653_108370759_108371063_108371214_108371438_108371565_108371723_108371825
ENSMUSG00000006676.17_108370546_108372126_1	chr9	+	978	6	ISM	ENSMUSG00000006676.17	ENST00000453664.5	4726	27	2650	7312	2491	-6770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCACACGAGCTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	108370545	108372126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108370653_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010
ENSMUSG00000006676.17_108370897_108372433_1	chr9	+	929	6	ISM	ENSMUSG00000006676.17	ENSMUST00000193678.6	4517	27	2853	7083	2842	-6463	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACCCACACTTGGCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	108370896	108372433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238
ENSMUSG00000006676.17_108371007_108372798_1	chr9	+	902	7	ISM	ENSMUSG00000006676.17	ENSMUST00000193678.6	4517	27	2963	6718	2952	-6098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGACGAAGAGGAAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	108371006	108372798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735
ENSMUSG00000006676.17_108371213_108372931_1	chr9	+	981	6	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	3317	5965	3158	-5965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTCAGGGCCAGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	108371212	108372931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735
ENSMUSG00000006676.17_108371381_108373143_1	chr9	+	947	7	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	3485	5753	3326	-5753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTGCTCACCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	108371380	108373143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009
ENSMUSG00000006676.17_108371568_108373285_1	chr9	+	905	7	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	3672	5611	3513	-5611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGCCAGTTCACAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	108371567	108373285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268
ENSMUSG00000006676.17_108371568_108373342_1	chr9	+	962	7	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	3672	5554	3513	-5554	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGATGGGCTACATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	108371567	108373342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268
ENSMUSG00000006676.17_108371682_108373411_1	chr9	+	917	7	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	3786	5485	3627	-5485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCGGCCCGATGAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	108371681	108373411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268
ENSMUSG00000006676.17_108372074_108374093_1	chr9	+	911	7	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	4178	4803	4019	-4803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCCACAAAAGCAAAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	108372073	108374093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050
ENSMUSG00000006676.17_108372298_108374366_1	chr9	+	969	7	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	4402	4530	4243	-4530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTGTCCTTCCCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	108372297	108374366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264
ENSMUSG00000006676.17_108372735_108375346_1	chr9	+	980	8	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	4839	3550	4680	-3550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAAGTGCGCAGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	108372734	108375346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321
ENSMUSG00000006676.17_108372866_108375388_1	chr9	+	891	8	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	4970	3508	4811	-3508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGCTGAAGCGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	108372865	108375388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321
ENSMUSG00000006676.17_108372916_108375440_1	chr9	+	893	8	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	5020	3456	4861	-3456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGCCCCATGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	108372915	108375440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321
ENSMUSG00000006676.17_108373062_108375756_1	chr9	+	941	8	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	5166	3140	5007	-3140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACTAGAAGGTTATGCC	NA	NA	NA	NA	NA	NA	NA	NA	108373061	108375756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640
ENSMUSG00000006676.17_108373107_108375760_1	chr9	+	900	8	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	5211	3136	5052	-3136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGAAGGTTATGCCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	108373106	108375760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640
ENSMUSG00000006676.17_108373267_108375918_1	chr9	+	923	8	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	5371	2978	5212	-2978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCATGGCTTTGGAATCGCA	NA	NA	NA	NA	NA	NA	NA	NA	108373266	108375918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878
ENSMUSG00000006676.17_108373546_108376092_1	chr9	+	894	7	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	5650	2804	5491	-2804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCCTAGCACCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	108373545	108376092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878
ENSMUSG00000006676.17_108373546_108376132_1	chr9	+	934	7	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	5650	2764	5491	-2764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGGCCTATCGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	108373545	108376132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878
ENSMUSG00000006676.17_108375138_108376598_1	chr9	+	886	6	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	7242	2298	7083	-2298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAAGATCCAGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	108375137	108376598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492
ENSMUSG00000006676.17_108375185_108376654_1	chr9	+	895	6	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	7289	2242	7130	-2242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTGCCTCAACCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	108375184	108376654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492
ENSMUSG00000006676.17_108375320_108376819_1	chr9	+	930	6	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	7424	2077	7265	-2077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTCCAAACAGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	108375319	108376819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790
ENSMUSG00000006676.17_108375703_108377101_1	chr9	+	924	6	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	7807	1795	7648	-1795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGACCTGTATGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	108375702	108377101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048
ENSMUSG00000006676.17_108375902_108377327_1	chr9	+	971	6	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	8006	1569	7847	-1569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAAAGCCAGGTCGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	108375901	108377327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289
ENSMUSG00000006676.17_108376014_108377380_1	chr9	+	912	6	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	8118	1516	7959	-1516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCTCCTGTGGAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	108376013	108377380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289
ENSMUSG00000006676.17_108376378_108379200_1	chr9	+	899	6	ISM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	8323	316	8323	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGCCATCTCTGACATT	NA	NA	NA	NA	NA	NA	NA	NA	108376377	108379200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ENSMUSG00000006676.17_108376591_108379312_1	chr9	+	886	5	ISM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	8536	204	8536	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAACTTGGTCCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	108376590	108379312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ENSMUSG00000006676.17_108376653_108379375_1	chr9	+	887	5	ISM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	8598	141	8598	-63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTCTCAGTTGTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	108376652	108379375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ENSMUSG00000006676.17_108376790_108379516_1	chr9	+	972	4	ISM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	8735	0	8735	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAGTGACTGATCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	108376789	108379516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108376944_108377048_108377210_108377289_108377469_108379038
ENSMUSG00000006699.18_137047398_137059790_1	chr4	-	1487	4	ISM	ENSMUSG00000006699.18	ENST00000344548.7	2214	7	25241	387	25220	-365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCCATCTCCTTTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	137059790	137047397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717
ENSMUSG00000006699.18_137047603_137063440_1	chr4	-	1437	5	ISM	ENSMUSG00000006699.18	ENST00000344548.7	2214	7	21591	592	21570	-570	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAATGAAAAGTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	137063440	137047602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285
ENSMUSG00000006699.18_137047603_137063442_1	chr4	-	1433	5	NNC	ENSMUSG00000006699.18	novel	2108	6	NA	NA	21568	-570	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAATGAAAAGTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	137063442	137047602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_137048504_137056023_137056222_137056325_137056430_137059717_137059791_137063285
ENSMUSG00000006699.18_137047603_137085010_1	chr4	-	1491	6	FSM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	21	596	0	-570	multi-exon	FALSE	canonical	NA	NA	NA	NA	3653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAATGAAAAGTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	137085010	137047602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
ENSMUSG00000006699.18_137047792_137084900_1	chr4	-	1318	6	FSM	ENSMUSG00000006699.18	ENST00000400259.5	2249	6	172	759	110	-759	multi-exon	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTCTTGAAAGTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	137084900	137047791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084830
ENSMUSG00000006699.18_137047858_137085010_1	chr4	-	1362	6	FSM	ENSMUSG00000006699.18	ENST00000400259.5	2249	6	62	825	0	-825	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCAAACGTGTCCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	137085010	137047857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084830
ENSMUSG00000006699.18_137047924_137085010_1	chr4	-	1296	6	FSM	ENSMUSG00000006699.18	ENST00000400259.5	2249	6	62	891	0	-891	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCATAGGACAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	137085010	137047923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084830
ENSMUSG00000006711.16_25042025_25051118_1	chr13	+	401	5	ISM	ENSMUSG00000006711.16	ENST00000535378.5	3586	19	3555	33312	3555	-33312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGCTCAGTGTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	25042024	25051118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_25042094_25046620_25046720_25047576_25047675_25048715_25048804_25051071
ENSMUSG00000006711.16_25046657_25055296_1	chr13	+	402	5	ISM	ENSMUSG00000006711.16	ENST00000535378.5	3586	19	8187	29134	8187	-29134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGAGGAGTTTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	25046656	25055296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_25046720_25047576_25047675_25048715_25048804_25051071_25051165_25055236
ENSMUSG00000006711.16_25055329_25083958_1	chr13	+	1646	12	FSM	ENSMUSG00000006711.16	ENST00000616673.4	2210	12	92	472	92	-472	multi-exon	TRUE	canonical	NA	NA	NA	NA	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACAAAATCCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	25055328	25083958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_25055374_25056201_25056357_25062008_25062051_25063578_25063728_25064752_25064905_25066523_25066663_25067723_25067884_25069560_25069704_25071818_25071942_25073806_25073898_25077343_25077436_25083603
ENSMUSG00000006711.16_25055329_25083958_2	chr13	+	1645	12	NNC	ENSMUSG00000006711.16	novel	2210	12	NA	NA	92	-472	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1048	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACAAAATCCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	25055328	25083958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_25055374_25056201_25056357_25062008_25062051_25063578_25063728_25064752_25064905_25066524_25066663_25067723_25067884_25069560_25069704_25071818_25071942_25073806_25073898_25077343_25077436_25083603
ENSMUSG00000006711.16_25055329_25083958_3	chr13	+	1635	11	NNC	ENSMUSG00000006711.16	novel	2210	12	NA	NA	92	-472	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACAAAATCCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	25055328	25083958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_25055374_25056201_25056388_25063578_25063728_25064752_25064905_25066523_25066663_25067723_25067884_25069560_25069704_25071818_25071942_25073806_25073898_25077343_25077436_25083603
ENSMUSG00000006711.16_25062003_25084165_1	chr13	+	1659	10	ISM	ENSMUSG00000006711.16	ENST00000616673.4	2210	12	6766	265	6766	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGACTGCCTCTAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	25062002	25084165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_25062051_25063578_25063728_25064752_25064905_25066523_25066663_25067723_25067884_25069560_25069704_25071818_25071942_25073806_25073898_25077343_25077436_25083603
ENSMUSG00000006711.16_25064752_25084434_1	chr13	+	1732	8	ISM	ENSMUSG00000006711.16	ENST00000616673.4	2210	12	9515	-4	9515	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGTGGGACTTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	25064751	25084434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_25064905_25066523_25066663_25067723_25067884_25069560_25069704_25071818_25071942_25073806_25073898_25077343_25077436_25083603
ENSMUSG00000006715.12_24935828_24940718_1	chr13	-	716	4	ISM	ENSMUSG00000006715.12	ENSMUST00000006898.10	1127	7	5126	0	5126	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGTGGAGAATTAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24940718	24935827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582
ENSMUSG00000006715.12_24937331_24940665_1	chr13	-	277	3	ISM	ENSMUSG00000006715.12	ENSMUST00000006898.10	1127	7	5179	1503	5179	-1503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTCATCCCACAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	24940665	24937330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_24937442_24937640_24937724_24940582
ENSMUSG00000006728.13_126899478_126902106_1	chr10	+	337	3	NNC	ENSMUSG00000006728.13	novel	366	3	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGACCTGGGCGGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	126899477	126902106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_126899629_126901823_126901873_126901969
ENSMUSG00000006728.13_126899478_126902106_2	chr10	+	339	3	FSM	ENSMUSG00000006728.13	ENST00000549606.5	366	3	27	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGACCTGGGCGGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	126899477	126902106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_126899629_126901821_126901873_126901969
ENSMUSG00000006728.13_126899485_126901872_1	chr10	+	843	6	ISM	ENSMUSG00000006728.13	ENSMUST00000006911.12	2053	8	82	1917	-9	-234	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATTTGATAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	126899484	126901872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821
ENSMUSG00000006728.13_126899485_126902106_1	chr10	+	327	3	NNC	ENSMUSG00000006728.13	novel	366	3	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGACCTGGGCGGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	126899484	126902106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_126899624_126901821_126901873_126901969
ENSMUSG00000006728.13_126899485_126902106_2	chr10	+	330	3	NNC	ENSMUSG00000006728.13	novel	366	3	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1066	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGACCTGGGCGGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	126899484	126902106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_126899629_126901821_126901873_126901971
ENSMUSG00000006728.13_126900167_126902871_1	chr10	+	831	7	ISM	ENSMUSG00000006728.13	ENST00000257904.11	1391	8	673	343	673	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGCGACGCAGAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	126900166	126902871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ENSMUSG00000006728.13_126900305_126902923_1	chr10	+	745	7	ISM	ENSMUSG00000006728.13	ENST00000257904.11	1391	8	811	291	811	52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTCGCTGAAGCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	126900304	126902923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ENSMUSG00000006728.13_126900702_126903104_1	chr10	+	774	5	ISM	ENSMUSG00000006728.13	ENST00000257904.11	1391	8	1208	110	1208	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTATACTGGGATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	126900701	126903104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ENSMUSG00000006728.13_126900763_126903104_1	chr10	+	713	5	ISM	ENSMUSG00000006728.13	ENST00000257904.11	1391	8	1269	110	1269	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTATACTGGGATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	126900762	126903104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ENSMUSG00000006728.13_126901023_126903244_1	chr10	+	745	4	ISM	ENSMUSG00000006728.13	ENST00000257904.11	1391	8	1529	-30	1529	30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGAAAACAAGTTCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	126901022	126903244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126901134_126901821_126901873_126901969_126902106_126902797
ENSMUSG00000006731.11_127000966_127006146_1	chr10	+	1429	6	FSM	ENSMUSG00000006731.11	ENST00000449184.7	1425	6	2	-6	2	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCCTATCACAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	127000965	127006146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003535_127003751_127005846
ENSMUSG00000006731.11_127002051_127006495_1	chr10	+	689	6	ISM	ENSMUSG00000006731.11	ENST00000418555.6	1748	8	181	1521	181	355	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACCACCAAATACGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	127002050	127006495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127002092_127002867_127002975_127003535_127003751_127005612_127005712_127005846_127006038_127006459
ENSMUSG00000006731.11_127002669_127003605_1	chr10	+	260	3	ISM	ENSMUSG00000006731.11	ENST00000552350.5	910	4	799	346	799	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGGGAAGTAACAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	127002668	127003605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127002752_127002867_127002975_127003535
ENSMUSG00000006731.11_127002866_127006607_1	chr10	+	762	5	ISM	ENSMUSG00000006731.11	ENST00000418555.6	1748	8	996	1409	996	467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGAGCCGGATGTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	127002865	127006607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127002975_127003535_127003751_127005612_127005712_127005846_127006038_127006459
ENSMUSG00000006731.11_127003598_127006860_1	chr10	+	657	5	ISM	ENSMUSG00000006731.11	ENST00000418555.6	1748	8	1728	1156	1728	720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGGCCTTGGGAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	127003597	127006860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787
ENSMUSG00000006731.11_127003657_127006943_1	chr10	+	681	5	ISM	ENSMUSG00000006731.11	ENST00000418555.6	1748	8	1787	1073	1787	803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGGTCAACTTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	127003656	127006943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787
ENSMUSG00000006731.11_127003721_127006986_1	chr10	+	660	5	ISM	ENSMUSG00000006731.11	ENST00000418555.6	1748	8	1851	1030	1851	846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGCTTTGACCCACGC	NA	NA	NA	NA	NA	NA	NA	NA	127003720	127006986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787
ENSMUSG00000006731.11_127005678_127007533_1	chr10	+	656	5	ISM	ENSMUSG00000006731.11	ENST00000418555.6	1748	8	3808	483	3808	-483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTGTGGATCATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	127005677	127007533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
ENSMUSG00000006731.11_127005937_127007653_1	chr10	+	652	4	ISM	ENSMUSG00000006731.11	ENST00000418555.6	1748	8	4067	363	4067	-363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCCTACTCTTCTTCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	127005936	127007653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127006038_127006459_127006601_127006787_127007029_127007484
ENSMUSG00000006731.11_127005984_127007710_1	chr10	+	662	4	ISM	ENSMUSG00000006731.11	ENST00000418555.6	1748	8	4114	306	4114	-306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCCTTCACACTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	127005983	127007710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127006038_127006459_127006601_127006787_127007029_127007484
ENSMUSG00000006731.11_127006556_127007858_1	chr10	+	660	3	ISM	ENSMUSG00000006731.11	ENST00000418555.6	1748	8	4686	158	4686	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACACCCTTCCTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	127006555	127007858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127006601_127006787_127007029_127007484
ENSMUSG00000006731.11_127006902_127008017_1	chr10	+	660	2	ISM	ENSMUSG00000006731.11	ENST00000418555.6	1748	8	5032	-1	5032	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCAAGTGGAAACACTCT	NA	NA	NA	NA	NA	NA	NA	NA	127006901	127008017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127007029_127007484
ENSMUSG00000006732.15_126877852_126880958_1	chr10	+	430	4	ISM	ENSMUSG00000006732.15	ENST00000257848.7	615	5	0	336	0	-336	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCCACTGTTTGAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	126877851	126880958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126877940_126878928_126879093_126880624_126880739_126880894
ENSMUSG00000006732.15_126877852_126882047_1	chr10	+	1553	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	51	187	0	-187	multi-exon	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTATCTCTGTGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	126877851	126882047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
ENSMUSG00000006732.15_126878929_126882234_1	chr10	+	1652	5	ISM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	1128	0	1077	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGAGTGTTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	126878928	126882234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
ENSMUSG00000006732.15_126879009_126881258_1	chr10	+	411	4	ISM	ENSMUSG00000006732.15	ENST00000257848.7	615	5	1157	36	1157	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCCAGGCAGTGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	126879008	126881258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126879093_126880624_126880739_126880894_126880997_126881147
ENSMUSG00000006732.15_126879033_126881278_1	chr10	+	400	4	NNC	ENSMUSG00000006732.15	novel	615	5	NA	NA	1181	-16	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCCCACCCTGCCTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	126879032	126881278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_126879093_126880624_126880739_126880894_126880997_126881154
ENSMUSG00000006736.10_126903149_126906125_1	chr10	-	1537	6	NNC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTTGTTTTCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	126906125	126903148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_126904060_126904148_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905983
ENSMUSG00000006736.10_126903149_126906125_2	chr10	-	1543	6	NNC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4033	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTTGTTTTCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	126906125	126903148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_126904060_126904137_126904252_126904353_126904481_126904776_126904858_126905214_126905383_126905983
ENSMUSG00000006736.10_126903149_126906125_3	chr10	-	1539	6	NNC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4031	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTTGTTTTCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	126906125	126903148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905992
ENSMUSG00000006740.15_6203089_6209072_1	chr18	-	841	3	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	32451	2087	32451	-2087	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAAATTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	6209072	6203088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6203708_6208186_6208336_6208999
ENSMUSG00000006740.15_6203233_6209108_1	chr18	-	733	3	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	32415	2231	32415	-2231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTAAAAATCCCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	6209108	6203232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6203708_6208186_6208336_6208999
ENSMUSG00000006740.15_6203546_6212540_1	chr18	-	790	7	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	28983	2544	28983	-2544	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAGAGTGCAATGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	6212540	6203545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516
ENSMUSG00000006740.15_6203615_6212576_1	chr18	-	757	7	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	28947	2613	28947	-2613	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGTAAATTACTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	6212576	6203614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516
ENSMUSG00000006740.15_6203679_6212618_1	chr18	-	735	7	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	28905	2677	28905	-2677	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAAAATCAGTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	6212618	6203678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516
ENSMUSG00000006740.15_6208181_6213210_1	chr18	-	736	7	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	28313	7179	28313	-7179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCCTGACTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	6213210	6208180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186
ENSMUSG00000006740.15_6208312_6213444_1	chr18	-	743	8	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	28079	7310	28079	-7310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGCGGCCTCGCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	6213444	6208311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392
ENSMUSG00000006740.15_6209000_6214096_1	chr18	-	856	8	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	27427	7998	27427	-7998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACAGCATACCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	6214096	6208999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969
ENSMUSG00000006740.15_6209155_6214579_1	chr18	-	760	9	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	26944	8153	26944	-8153	internal_fragment	TRUE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGCAGAAAGAGTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	6214579	6209154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511
ENSMUSG00000006740.15_6210700_6214700_1	chr18	-	819	8	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	26823	9698	26823	-9698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACGGAGAGAGAACGACA	NA	NA	NA	NA	NA	NA	NA	NA	6214700	6210699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511
ENSMUSG00000006740.15_6212548_6216814_1	chr18	-	768	7	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	24709	11546	24709	-11546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAGAGCAGGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	6216814	6212547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740
ENSMUSG00000006740.15_6213187_6216947_1	chr18	-	830	6	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	24576	12185	24576	-12185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGCTGTGCTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	6216947	6213186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740
ENSMUSG00000006740.15_6213446_6220292_1	chr18	-	736	6	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	21231	12444	21231	-12444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAATGGAAAAAGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	6220292	6213445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223
ENSMUSG00000006740.15_6214071_6220926_1	chr18	-	751	6	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	20597	13069	20597	-13069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTGACTGAGTACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	6220926	6214070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801
ENSMUSG00000006740.15_6214569_6222758_1	chr18	-	786	6	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	18765	13567	18765	-13567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATGGAAGAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	6222758	6214568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718
ENSMUSG00000006740.15_6214569_6222797_1	chr18	-	825	6	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	18726	13567	18726	-13567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATGGAAGAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	6222797	6214568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718
ENSMUSG00000006740.15_6214683_6222857_1	chr18	-	771	6	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	18666	13681	18666	-13681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATAGATGAAGAGTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	6222857	6214682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718
ENSMUSG00000006740.15_6216230_6223574_1	chr18	-	785	6	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	17949	15228	17949	-15228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAGGTACTACTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	6223574	6216229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545
ENSMUSG00000006740.15_6216306_6223618_1	chr18	-	753	6	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	17905	15304	17905	-15304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACGAGCAGCTGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	6223618	6216305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545
ENSMUSG00000006740.15_6216341_6223691_1	chr18	-	791	6	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	17832	15339	17832	-15339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTCAGAAGCTGAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	6223691	6216340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545
ENSMUSG00000006740.15_6216896_6225369_1	chr18	-	767	7	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	16154	15894	16154	-15894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTCCAAGCAGAAAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	6225369	6216895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317
ENSMUSG00000006740.15_6220860_6225823_1	chr18	-	805	7	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	15700	19858	15700	-19858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGAAGAAAGTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	6225823	6220859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767
ENSMUSG00000006740.15_6222718_6226974_1	chr18	-	830	8	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	14549	21716	14549	-21716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCACTTAAGCATTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	6226974	6222717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863
ENSMUSG00000006740.15_6223545_6234902_1	chr18	-	837	9	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	6621	22543	6621	-22543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTGTTGAAATACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	6234902	6223544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814
ENSMUSG00000006740.15_6223669_6241018_1	chr18	-	750	10	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	505	22667	505	-22667	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGACCAGAATTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	6241018	6223668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ENSMUSG00000006740.15_6223971_6241136_1	chr18	-	845	9	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	387	22969	387	-22969	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATACAATCTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	6241136	6223970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ENSMUSG00000006740.15_6225626_6241309_1	chr18	-	759	7	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	214	24624	214	-24624	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCCAACAGACATGTCG	NA	NA	NA	NA	NA	NA	NA	NA	6241309	6225625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ENSMUSG00000006763.15_46335532_46348976_1	chr7	-	3827	4	ISM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	11128	0	11128	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	46348976	46335531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787
ENSMUSG00000006763.15_46335759_46351239_1	chr7	-	3718	6	ISM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	8865	227	8865	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTGTTGTCTTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	46351239	46335758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204
ENSMUSG00000006763.15_46335818_46351292_1	chr7	-	3712	6	ISM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	8812	286	8812	-286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTCTGAACTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	46351292	46335817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204
ENSMUSG00000006763.15_46335882_46351333_1	chr7	-	3689	6	ISM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	8771	350	8771	-350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAAGTTTCATACTGACA	NA	NA	NA	NA	NA	NA	NA	NA	46351333	46335881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204
ENSMUSG00000006763.15_46336155_46356437_1	chr7	-	3745	10	ISM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	3667	623	3667	-623	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTTACTGACCTTGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	46356437	46336154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416
ENSMUSG00000006763.15_46336273_46358341_1	chr7	-	3744	11	ISM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	1763	741	1763	-741	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTCTCCTGGGCTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	46358341	46336272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287
ENSMUSG00000006763.15_46336385_46359948_1	chr7	-	3719	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	156	853	156	-853	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATACCTGAATTTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	46359948	46336384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ENSMUSG00000006763.15_46336442_46360065_1	chr7	-	3779	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	39	910	39	-910	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCGGGAGGGAGAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	46360065	46336441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ENSMUSG00000006782.17_100465730_100471200_1	chr11	+	1003	4	FSM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	0	1354	0	-1354	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTGTCCATCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	100465729	100471200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_100465895_100467061_100467732_100469738_100469879_100471172
ENSMUSG00000006782.17_100465730_100471259_1	chr11	+	1062	4	FSM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	0	1295	0	-1295	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCGATCAGGAGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	100465729	100471259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_100465895_100467061_100467732_100469738_100469879_100471172
ENSMUSG00000006782.17_100465872_100471296_1	chr11	+	957	4	FSM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	142	1258	142	-1258	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAAGCCATCTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	100465871	100471296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_100465895_100467061_100467732_100469738_100469879_100471172
ENSMUSG00000006782.17_100467387_100471678_1	chr11	+	991	3	ISM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	1657	876	1657	-876	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACCTGATTTTTAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	100467386	100471678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100467732_100469738_100469879_100471172
ENSMUSG00000006782.17_100467460_100471732_1	chr11	+	972	3	ISM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	1730	822	1730	-822	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTTTAGGAGTCTATAA	NA	NA	NA	NA	NA	NA	NA	NA	100467459	100471732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100467732_100469738_100469879_100471172
ENSMUSG00000006782.17_100467533_100471789_1	chr11	+	956	3	ISM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	1803	765	1803	-765	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTAATACTCAGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	100467532	100471789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100467732_100469738_100469879_100471172
ENSMUSG00000006782.17_100469739_100471974_1	chr11	+	942	2	ISM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	4009	580	4009	-580	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCCACATGCTAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	100469738	100471974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100469879_100471172
ENSMUSG00000006782.17_100469774_100472052_1	chr11	+	985	2	ISM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	4044	502	4044	-502	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTTTTTAATCACTATA	NA	NA	NA	NA	NA	NA	NA	NA	100469773	100472052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100469879_100471172
ENSMUSG00000006782.17_100469834_100472108_1	chr11	+	981	2	ISM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	4104	446	4104	-446	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGGTTTACCTCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	100469833	100472108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100469879_100471172
ENSMUSG00000006818.6_13193902_13234062_1	chr17	+	841	5	FSM	ENSMUSG00000006818.6	ENST00000546087.5	866	5	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCACGGCCACATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	13193901	13234062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_13194093_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ENSMUSG00000006818.6_13226746_13237244_1	chr17	+	4042	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	42	1777	42	-1777	multi-exon	FALSE	canonical	NA	NA	NA	NA	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAATACTTTCTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	13226745	13237244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ENSMUSG00000006818.6_13226883_13237302_1	chr17	+	3963	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	179	1719	179	-1719	multi-exon	FALSE	canonical	NA	NA	NA	NA	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTTGCTGTTTGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	13226882	13237302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ENSMUSG00000006818.6_13226883_13237353_1	chr17	+	4014	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	179	1668	179	-1668	multi-exon	FALSE	canonical	NA	NA	NA	NA	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACTAGTGTGAGGGAATA	NA	NA	NA	NA	NA	NA	NA	NA	13226882	13237353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ENSMUSG00000006818.6_13227071_13237483_1	chr17	+	4071	4	ISM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	367	1538	-36	-1538	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGTTTGTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	13227070	13237483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_13227274_13229406_13229524_13232319_13232500_13233912
ENSMUSG00000006818.6_13227188_13237558_1	chr17	+	4029	4	ISM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	484	1463	81	-1463	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTAGAGGACAACTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	13227187	13237558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_13227274_13229406_13229524_13232319_13232500_13233912
ENSMUSG00000006818.6_13227201_13232500_1	chr17	+	251	2	NNC	ENSMUSG00000006818.6	novel	497	3	NA	NA	94	-1562	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGCTTTAAAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	13227200	13232500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_13227274_13232322
ENSMUSG00000006818.6_13227201_13233960_1	chr17	+	301	3	FSM	ENSMUSG00000006818.6	ENST00000337404.8	497	3	94	102	94	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGTATAAAAACGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	13227200	13233960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_13227274_13232319_13232500_13233912
ENSMUSG00000006818.6_13229455_13237685_1	chr17	+	4022	3	ISM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	2751	1336	2348	-1336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTACAGTCTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	13229454	13237685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_13229524_13232319_13232500_13233912
ENSMUSG00000006818.6_13229488_13237759_1	chr17	+	4063	3	ISM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	2784	1262	2381	-1262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAGAGTATGGAGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	13229487	13237759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_13229524_13232319_13232500_13233912
ENSMUSG00000006818.6_13232384_13234062_1	chr17	+	266	2	ISM	ENSMUSG00000006818.6	ENST00000337404.8	497	3	5277	0	5277	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCACGGCCACATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	13232383	13234062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_13232500_13233912
ENSMUSG00000006818.6_13232384_13234062_2	chr17	+	265	2	NNC	ENSMUSG00000006818.6	novel	497	3	NA	NA	5277	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCACGGCCACATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	13232383	13234062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_13232500_13233913
ENSMUSG00000006850.9_36868220_36871760_1	chr18	+	791	7	ISM	ENSMUSG00000006850.9	ENST00000252100.6	1487	12	-5	3441	-5	2510	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGTTTGCTTGGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	36868219	36871760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871663
ENSMUSG00000006850.9_36868220_36871764_1	chr18	+	778	7	ISM	ENSMUSG00000006850.9	ENSMUST00000007046.9	1823	12	99	3686	-5	2514	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTGGTGCCTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	36868219	36871764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871680
ENSMUSG00000006850.9_36868489_36872056_1	chr18	+	741	7	ISM	ENSMUSG00000006850.9	ENST00000252100.6	1487	12	264	3145	264	2806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGCTTTTGGACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	36868488	36872056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871663_36871798_36872005
ENSMUSG00000006850.9_36870571_36872264_1	chr18	+	733	7	ISM	ENSMUSG00000006850.9	ENST00000252100.6	1487	12	2346	2937	2346	-2937	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATGGGACAGCAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	36870570	36872264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871663_36871798_36872005_36872118_36872207
ENSMUSG00000006850.9_36870847_36874151_1	chr18	+	730	7	ISM	ENSMUSG00000006850.9	ENST00000252100.6	1487	12	2622	1050	2622	-1050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCGCTCTTGCAGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	36870846	36874151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36870906_36871148_36871254_36871414_36871501_36871663_36871798_36872005_36872118_36872207_36872395_36874104
ENSMUSG00000006850.9_36870852_36874175_1	chr18	+	732	7	ISM	ENSMUSG00000006850.9	ENSMUST00000007046.9	1823	12	2731	1275	2627	-1026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCAAATGCAGTATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	36870851	36874175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36870906_36871148_36871254_36871414_36871501_36871680_36871798_36872005_36872118_36872207_36872395_36874104
ENSMUSG00000006850.9_36871199_36874779_1	chr18	+	734	7	ISM	ENSMUSG00000006850.9	ENST00000252100.6	1487	12	2974	422	2974	-422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGCTCTCCTGCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	36871198	36874779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36871254_36871414_36871501_36871663_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714
ENSMUSG00000006850.9_36871229_36874852_1	chr18	+	777	7	ISM	ENSMUSG00000006850.9	ENST00000252100.6	1487	12	3004	349	3004	-349	internal_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCTGCTATTCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	36871228	36874852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36871254_36871414_36871501_36871663_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714
ENSMUSG00000006850.9_36871709_36875178_1	chr18	+	730	6	ISM	ENSMUSG00000006850.9	ENST00000252100.6	1487	12	3484	23	3484	-23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACGCGCTCCAGCAGATA	NA	NA	NA	NA	NA	NA	NA	NA	36871708	36875178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714_36874883_36875099
ENSMUSG00000006850.9_36871779_36875257_1	chr18	+	739	6	ISM	ENSMUSG00000006850.9	ENST00000252100.6	1487	12	3554	-56	3554	56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGGGTCTCCTACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	36871778	36875257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714_36874883_36875099
ENSMUSG00000006850.9_36872266_36875450_1	chr18	+	743	4	ISM	ENSMUSG00000006850.9	ENSMUST00000007046.9	1823	12	4145	0	4041	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTTGCCTCAGTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	36872265	36875450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36872395_36874104_36874200_36874714_36874883_36875099
ENSMUSG00000006906.11_83520336_83547333_1	chr6	-	1747	9	ISM	ENSMUSG00000006906.11	ENSMUST00000206400.2	2144	10	2082	137	154	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGGGAGCTTACCATTC	NA	NA	NA	NA	NA	NA	NA	NA	83547333	83520335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83521019_83524212_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284
ENSMUSG00000006906.11_83520336_83547397_1	chr6	-	1811	9	ISM	ENSMUSG00000006906.11	ENSMUST00000206400.2	2144	10	2018	137	90	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGGGAGCTTACCATTC	NA	NA	NA	NA	NA	NA	NA	NA	83547397	83520335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83521019_83524212_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284
ENSMUSG00000006906.11_83520487_83547462_1	chr6	-	1725	9	ISM	ENSMUSG00000006906.11	ENSMUST00000206592.2	2152	10	1937	-257	25	257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTTCTCTAGATCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	83547462	83520486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83521019_83524212_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284
ENSMUSG00000006906.11_83520744_83549711_1	chr6	-	1826	10	FSM	ENSMUSG00000006906.11	ENSMUST00000068054.9	2364	10	0	538	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATGTAAATTATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	83549711	83520743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_83521019_83524212_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83549392
ENSMUSG00000006906.11_83524213_83549399_1	chr6	-	1408	10	NNC	ENSMUSG00000006906.11	novel	1407	10	NA	NA	0	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	1855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATCTATGTGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	83549399	83524212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83549007_83549093_83549308
ENSMUSG00000006906.11_83524213_83549399_2	chr6	-	1403	10	NNC	ENSMUSG00000006906.11	novel	1407	10	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATCTATGTGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	83549399	83524212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539018_83540804_83540901_83541162_83541239_83547284_83547502_83549006_83549093_83549308
ENSMUSG00000006906.11_83524213_83549399_3	chr6	-	1405	10	NNC	ENSMUSG00000006906.11	novel	1407	10	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATCTATGTGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	83549399	83524212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83549006_83549093_83549312
ENSMUSG00000006906.11_83524213_83549399_4	chr6	-	1409	10	FSM	ENSMUSG00000006906.11	ENST00000394073.6	1407	10	-2	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATCTATGTGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	83549399	83524212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83549006_83549093_83549308
ENSMUSG00000006906.11_83524213_83549399_5	chr6	-	1404	10	NNC	ENSMUSG00000006906.11	novel	1407	10	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATCTATGTGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	83549399	83524212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_83524313_83528925_83529039_83533256_83533390_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83549006_83549093_83549308
ENSMUSG00000006906.11_83534470_83538923_1	chr6	-	251	3	ISM	ENSMUSG00000006906.11	ENST00000682352.1	1128	9	8564	10257	8564	-10257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAATACCGCCAAAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	83538923	83534469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83534544_83538656_83538748_83538837
ENSMUSG00000006906.11_83538657_83539025_1	chr6	-	279	2	ISM	ENSMUSG00000006906.11	ENST00000682352.1	1128	9	8462	14444	8462	-14444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCAGTCCCCTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	83539025	83538656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83538748_83538837
ENSMUSG00000006920.15_101088537_101094139_1	chr11	-	1865	4	ISM	ENSMUSG00000006920.15	ENST00000585893.5	2243	18	14053	4884	14053	-322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATGTAATTAAAGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	101094139	101088536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101090210_101090771_101090813_101091661_101091754_101094080
ENSMUSG00000006920.15_101088805_101094747_1	chr11	-	1896	5	ISM	ENSMUSG00000006920.15	ENST00000585893.5	2243	18	13445	5152	13445	-590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCTGGTTATAGAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	101094747	101088804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586
ENSMUSG00000006920.15_101089043_101099052_1	chr11	-	1875	7	ISM	ENSMUSG00000006920.15	ENST00000585893.5	2243	18	9140	5390	9140	-828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGGACATCCACGCACA	NA	NA	NA	NA	NA	NA	NA	NA	101099052	101089042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947
ENSMUSG00000006920.15_101089464_101104619_1	chr11	-	1863	10	ISM	ENSMUSG00000006920.15	ENST00000585893.5	2243	18	3573	5811	3573	-1249	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAAAAACGTCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	101104619	101089463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549
ENSMUSG00000006931.16_100299282_100303655_1	chr11	-	1193	5	ISM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	2007	0	2007	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCAGTCTGCAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	100303655	100299281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526
ENSMUSG00000006931.16_100299282_100304511_1	chr11	-	1270	6	ISM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	1151	0	1151	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCAGTCTGCAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	100304511	100299281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434
ENSMUSG00000006931.16_100299402_100304571_1	chr11	-	1210	6	ISM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	1091	120	1091	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACCAAGGCCAGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	100304571	100299401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434
ENSMUSG00000006931.16_100299508_100304905_1	chr11	-	1292	7	ISM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	757	226	757	-226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCGCAGACTGGTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	100304905	100299507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752
ENSMUSG00000006931.16_100299663_100305108_1	chr11	-	1243	8	FSM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	554	381	554	-381	multi-exon	FALSE	canonical	NA	NA	NA	NA	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGCTAGCCTGTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	100305108	100299662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
ENSMUSG00000006931.16_100299822_100305208_1	chr11	-	1184	8	FSM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	454	540	454	-540	multi-exon	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCAGATCTCGGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	100305208	100299821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
ENSMUSG00000006931.16_100300192_100305410_1	chr11	-	1234	7	ISM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	252	910	252	-910	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTCAGTACTGGATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	100305410	100300191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
ENSMUSG00000006931.16_100301940_100305662_1	chr11	-	1344	6	ISM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	0	2658	0	-2658	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCTTCCTGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	100305662	100301939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
ENSMUSG00000006932.18_120758282_120789096_1	chr9	+	2712	17	FSM	ENSMUSG00000006932.18	ENST00000405570.6	2647	17	-63	-2	-48	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTTGTTCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	120758281	120789096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_120758423_120759131_120759210_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374_120788596_120789009
ENSMUSG00000006932.18_120762466_120779701_1	chr9	+	414	3	ISM	ENSMUSG00000006932.18	ENST00000643992.1	2827	16	-66	9380	0	-9145	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTCCCTGAGTGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	120762465	120779701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120762705_120779238_120779300_120779587
ENSMUSG00000006932.18_120762638_120780014_1	chr9	+	411	4	ISM	ENSMUSG00000006932.18	ENST00000644873.1	2998	15	29	9080	0	-8832	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGACGCTAGATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	120762637	120780014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959
ENSMUSG00000006932.18_120762638_120780079_1	chr9	+	476	4	ISM	ENSMUSG00000006932.18	ENST00000644873.1	2998	15	29	9015	0	-8767	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCAGCGCTTGGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	120762637	120780079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959
ENSMUSG00000006932.18_120779287_120788846_1	chr9	+	2798	14	NIC	ENSMUSG00000006932.18	novel	2996	15	NA	NA	9	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGTAGTGTCTGAACG	NA	NA	NA	NA	NA	NA	NA	NA	120779286	120788846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_120779437_120779535_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ENSMUSG00000006932.18_120779637_120789096_1	chr9	+	2383	14	ISM	ENSMUSG00000006932.18	ENST00000450969.6	2454	15	359	0	359	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTTGTTCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	120779636	120789096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374_120788596_120789009
ENSMUSG00000006932.18_120779772_120789096_1	chr9	+	2248	14	ISM	ENSMUSG00000006932.18	ENST00000450969.6	2454	15	494	0	494	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTTGTTCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	120779771	120789096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374_120788596_120789009
ENSMUSG00000006932.18_120779772_120789096_2	chr9	+	2662	13	ISM	ENSMUSG00000006932.18	ENST00000450969.6	2454	15	494	0	494	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	3592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTTGTTCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	120779771	120789096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ENSMUSG00000006932.18_120779959_120788958_1	chr9	+	2226	13	ISM	ENSMUSG00000006932.18	ENST00000441708.2	2475	15	681	0	681	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGGGAACAGTCGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	120779958	120788958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374_120788596_120788850
ENSMUSG00000006932.18_120780155_120789096_1	chr9	+	2168	13	ISM	ENSMUSG00000006932.18	ENST00000642315.1	2611	15	877	-2	877	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTTGTTCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	120780154	120789096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374_120788596_120788850
ENSMUSG00000006932.18_120786226_120788455_1	chr9	+	482	5	ISM	ENSMUSG00000006932.18	ENST00000441708.2	2475	15	6948	503	6948	-391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCACCACCCTGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120786225	120788455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ENSMUSG00000006932.18_120786824_120788958_1	chr9	+	513	4	ISM	ENSMUSG00000006932.18	ENST00000441708.2	2475	15	7546	0	7546	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGGGAACAGTCGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	120786823	120788958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120786947_120787657_120787719_120788374_120788596_120788850
ENSMUSG00000006932.18_120787656_120789096_1	chr9	+	530	3	ISM	ENSMUSG00000006932.18	ENST00000642315.1	2611	15	8378	-2	8378	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTTGTTCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	120787655	120789096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120787719_120788374_120788596_120788850
ENSMUSG00000006941.6_120323172_120324396_1	chr9	+	685	3	ISM	ENSMUSG00000006941.6	ENSMUST00000007139.6	1035	4	1615	0	1615	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCAATGCACTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	120323171	120324396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120323337_120323600_120323703_120323978
ENSMUSG00000006998.17_20470466_20475439_1	chr16	+	1217	9	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	64	6725	64	-6725	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTTTCATTCGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	20470465	20475439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292
ENSMUSG00000006998.17_20470466_20475724_1	chr16	+	1324	10	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	64	6440	64	-6440	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTCTGGGCAAAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	20470465	20475724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617
ENSMUSG00000006998.17_20471342_20476359_1	chr16	+	1260	9	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	940	5805	940	-5805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTTCCCACTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	20471341	20476359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231
ENSMUSG00000006998.17_20471345_20476753_1	chr16	+	1287	10	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	943	5411	943	-5411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGATGTTCTAACACTGC	NA	NA	NA	NA	NA	NA	NA	NA	20471344	20476753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723
ENSMUSG00000006998.17_20471448_20476759_1	chr16	+	1190	10	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	1046	5405	1046	-5405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTAACACTGCTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	20471447	20476759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723
ENSMUSG00000006998.17_20473302_20478173_1	chr16	+	1196	10	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	2900	3991	2900	-3991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTTGTGGGATGATAGC	NA	NA	NA	NA	NA	NA	NA	NA	20473301	20478173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155
ENSMUSG00000006998.17_20473355_20478223_1	chr16	+	1193	10	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	2953	3941	2953	-3941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATCCTTCAGACCATCA	NA	NA	NA	NA	NA	NA	NA	NA	20473354	20478223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155
ENSMUSG00000006998.17_20473402_20478278_1	chr16	+	1201	10	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	3000	3886	3000	-3886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTTGGCTTCCTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	20473401	20478278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155
ENSMUSG00000006998.17_20473728_20478762_1	chr16	+	1221	11	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	3326	3402	3326	-3402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTCTAAGGAAAAGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	20473727	20478762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706
ENSMUSG00000006998.17_20473775_20478833_1	chr16	+	1245	11	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	3373	3331	3373	-3331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATGGGAGCACATCAGG	NA	NA	NA	NA	NA	NA	NA	NA	20473774	20478833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706
ENSMUSG00000006998.17_20474014_20479118_1	chr16	+	1261	11	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	3612	3046	3612	-3046	internal_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCTATGGGGGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	20474013	20479118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092
ENSMUSG00000006998.17_20474087_20479141_1	chr16	+	1211	11	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	3685	3023	3685	-3023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGAGATGGCATTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	20474086	20479141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092
ENSMUSG00000006998.17_20474309_20480434_1	chr16	+	1291	11	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	3907	1730	3907	-1730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGTTTCCTATAACTC	NA	NA	NA	NA	NA	NA	NA	NA	20474308	20480434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314
ENSMUSG00000006998.17_20474629_20480660_1	chr16	+	1292	11	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	4227	1504	4227	-1504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGAATAGGTGTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	20474628	20480660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565
ENSMUSG00000006998.17_20475372_20480859_1	chr16	+	1167	11	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	4970	1305	4970	-1305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGCACACTTACCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	20475371	20480859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842
ENSMUSG00000006998.17_20475372_20480969_1	chr16	+	1277	11	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	4970	1195	4970	-1195	internal_fragment	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTCCTGTCAGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	20475371	20480969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842
ENSMUSG00000006998.17_20475676_20481414_1	chr16	+	1194	11	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	5274	750	5274	-750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCATGCAGCCTCGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	20475675	20481414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371
ENSMUSG00000006998.17_20476240_20481825_1	chr16	+	1226	11	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	5838	339	5838	-339	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCAGGCTGGGAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	20476239	20481825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ENSMUSG00000006998.17_20476306_20481860_1	chr16	+	1195	11	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	5904	304	5904	-304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGACTCATACAACGCC	NA	NA	NA	NA	NA	NA	NA	NA	20476305	20481860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ENSMUSG00000006998.17_20476325_20481957_1	chr16	+	1273	11	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	5923	207	5923	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTATTCTTCGGAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	20476324	20481957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ENSMUSG00000006998.17_20478169_20482164_1	chr16	+	1344	9	ISM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	7767	0	7767	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	874	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	20478168	20482164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ENSMUSG00000007021.6_24904066_24908707_1	chr17	-	994	3	FSM	ENSMUSG00000007021.6	ENST00000618464.1	1072	3	93	-15	93	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGGTCCCCTGGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	24908707	24904065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24904855_24906522_24906715_24908694
ENSMUSG00000007021.6_24904167_24908749_1	chr17	-	935	3	FSM	ENSMUSG00000007021.6	ENST00000618464.1	1072	3	51	86	51	-86	multi-exon	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTTCCTCTGAAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	24908749	24904166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24904855_24906522_24906715_24908694
ENSMUSG00000007021.6_24904173_24908751_1	chr17	-	929	3	NNC	ENSMUSG00000007021.6	novel	1072	3	NA	NA	49	-92	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATTCCTTTTCCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	24908751	24904172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_24904853_24906522_24906715_24908694
ENSMUSG00000007021.6_24904222_24908799_1	chr17	-	930	3	FSM	ENSMUSG00000007021.6	ENST00000618464.1	1072	3	1	141	1	-141	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATGTGGATATTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	24908799	24904221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24904855_24906522_24906715_24908694
ENSMUSG00000007021.6_24904706_24906655_1	chr17	-	1031	3	ISM	ENSMUSG00000007021.6	ENSMUST00000007236.5	1965	4	2274	640	2145	-625	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGATTAAGTCTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	24906655	24904705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24905415_24905492_24905636_24906476
ENSMUSG00000007029.17_35220160_35220656_1	chr17	+	318	2	ISM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	197	14642	110	-14642	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGCAGGCCTGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	35220159	35220656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35220209_35220387
ENSMUSG00000007029.17_35220680_35223471_1	chr17	+	321	3	ISM	ENSMUSG00000007029.17	ENST00000375663.8	4068	30	630	11828	630	-11827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCGGCAACCGGAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	35220679	35223471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35220807_35223180_35223316_35223412
ENSMUSG00000007029.17_35229589_35230436_1	chr17	+	314	4	ISM	ENSMUSG00000007029.17	ENST00000375663.8	4068	30	9539	4863	9539	-4862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGGTGGAGTTTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	35229588	35230436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35229647_35229813_35229896_35230180_35230301_35230382
ENSMUSG00000007029.17_35231937_35232667_1	chr17	+	321	4	ISM	ENSMUSG00000007029.17	ENST00000375663.8	4068	30	11887	2632	11887	-2631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCTTGGCAATGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	35231936	35232667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35232012_35232097_35232169_35232240_35232367_35232618
ENSMUSG00000007029.17_35233215_35234837_1	chr17	+	866	5	ISM	ENSMUSG00000007029.17	ENST00000375663.8	4068	30	13165	462	13165	-461	internal_fragment	TRUE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCCAGCTACTCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	35233214	35234837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569
ENSMUSG00000007029.17_35234692_35235298_1	chr17	+	340	2	ISM	ENSMUSG00000007029.17	ENST00000375663.8	4068	30	14642	1	14642	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	35234691	35235298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35234896_35235162
ENSMUSG00000007038.6_35150290_35154359_1	chr17	+	1875	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	61	538	61	-538	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCAGCTGGAAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	35150289	35154359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
ENSMUSG00000007038.6_35150290_35154431_1	chr17	+	1947	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	61	466	61	-466	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGCAAGTGTCAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	35150289	35154431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
ENSMUSG00000007038.6_35150396_35154493_1	chr17	+	1903	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	167	404	167	-404	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGGAAATAGGGAACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	35150395	35154493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
ENSMUSG00000007038.6_35150839_35154615_1	chr17	+	1950	5	ISM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	610	282	610	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCTAAGCATGTTGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	35150838	35154615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
ENSMUSG00000007038.6_35151541_35154897_1	chr17	+	1987	4	ISM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	1312	0	1312	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	35151540	35154897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35151805_35152978_35153162_35153258_35153482_35153580
ENSMUSG00000007039.13_35278077_35281071_1	chr17	+	1279	7	FSM	ENSMUSG00000007039.13	ENST00000375787.6	1313	7	37	-3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	35278076	35281071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35278253_35279083_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
ENSMUSG00000007039.13_35278077_35281071_2	chr17	+	1272	7	NNC	ENSMUSG00000007039.13	novel	1254	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	35278076	35281071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35278249_35279078_35279438_35279578_35279679_35279816_35279883_35279980_35280101_35280451_35280602_35280766
ENSMUSG00000007039.13_35278077_35281071_3	chr17	+	1270	7	NNC	ENSMUSG00000007039.13	novel	1254	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	35278076	35281071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35278249_35279078_35279438_35279588_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
ENSMUSG00000007039.13_35278077_35281071_4	chr17	+	1273	7	NNC	ENSMUSG00000007039.13	novel	1254	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	35278076	35281071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279876_35279980_35280101_35280451_35280602_35280766
ENSMUSG00000007039.13_35278077_35281071_5	chr17	+	1274	7	NNC	ENSMUSG00000007039.13	novel	1254	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1749	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	35278076	35281071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280095_35280451_35280602_35280766
ENSMUSG00000007041.10_35268942_35277725_1	chr17	+	1458	6	NNC	ENSMUSG00000007041.10	novel	1466	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	6546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGCTTAAAGTGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	35268941	35277725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35269463_35271410_35271521_35271764_35271883_35272008_35272116_35274202_35274385_35277305
ENSMUSG00000007041.10_35268942_35277725_2	chr17	+	1460	6	NNC	ENSMUSG00000007041.10	novel	1466	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGCTTAAAGTGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	35268941	35277725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274379_35277305
ENSMUSG00000007041.10_35268942_35277725_3	chr17	+	1458	6	NNC	ENSMUSG00000007041.10	novel	1466	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGCTTAAAGTGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	35268941	35277725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35269463_35271418_35271521_35271756_35271883_35272008_35272116_35274202_35274385_35277305
ENSMUSG00000007041.10_35268942_35277725_4	chr17	+	1460	6	NNC	ENSMUSG00000007041.10	novel	1466	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGCTTAAAGTGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	35268941	35277725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35269457_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274385_35277305
ENSMUSG00000007041.10_35268942_35277725_5	chr17	+	1460	6	NNC	ENSMUSG00000007041.10	novel	1466	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6810	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGCTTAAAGTGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	35268941	35277725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274208_35274385_35277305
ENSMUSG00000007080.15_110460824_110465726_1	chr5	+	142	2	ISM	ENSMUSG00000007080.15	ENST00000535270.5	6535	46	22732	19362	-17739	-19362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCACACCACTCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	110460823	110465726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_110460895_110465655
ENSMUSG00000007097.15_172106181_172106501_1	chr1	-	131	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	19130	531	19039	-531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGCGGCTGCTAGGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	172106501	172106180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_172106248_172106437
ENSMUSG00000007097.15_172106226_172106558_1	chr1	-	143	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	19073	576	18982	-576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTACCTACTTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	172106558	172106225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_172106248_172106437
ENSMUSG00000007097.15_172106973_172107296_1	chr1	-	124	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	18335	1323	18244	-1323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATCACCCCCTTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	172107296	172106972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_172107035_172107234
ENSMUSG00000007097.15_172107585_172108199_1	chr1	-	133	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	17432	1935	17341	-1935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAGGGACCACACGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	172108199	172107584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_172107654_172108135
ENSMUSG00000007097.15_172107642_172108259_1	chr1	-	136	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	17372	1992	17281	-1992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTAGTGCACGGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	172108259	172107641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_172107654_172108135
ENSMUSG00000007097.15_172108196_172112139_1	chr1	-	150	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	13492	2546	13401	-2546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGACTGTGGAAGACATTG	NA	NA	NA	NA	NA	NA	NA	NA	172112139	172108195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_172108273_172112066
ENSMUSG00000007097.15_172112175_172112405_1	chr1	-	138	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	13226	6525	13135	-6525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCCCACAGAGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	172112405	172112174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_172112243_172112335
ENSMUSG00000007338.11_6104756_6107775_1	chr19	-	620	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	40	1104	13	-829	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGGGCTTTGAGATAAG	NA	NA	NA	NA	NA	NA	NA	NA	6107775	6104755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
ENSMUSG00000007338.11_6104806_6107775_1	chr19	-	570	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	40	1154	13	-879	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTCTCTGGAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	6107775	6104805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
ENSMUSG00000007411.17_111540957_111622605_1	chr12	+	3427	17	NNC	ENSMUSG00000007411.17	novel	3458	17	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	5914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAGTAGATTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	111540956	111622605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584812_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613123_111613283_111613904_111614163_111621703
ENSMUSG00000007411.17_111540957_111622605_2	chr12	+	3428	17	NNC	ENSMUSG00000007411.17	novel	3458	17	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	6145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAGTAGATTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	111540956	111622605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584756_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613123_111613283_111613904_111614163_111621703
ENSMUSG00000007411.17_111540957_111622605_3	chr12	+	3433	17	FSM	ENSMUSG00000007411.17	ENST00000679330.1	3458	17	25	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAGTAGATTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	111540956	111622605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613123_111613283_111613904_111614163_111621703
ENSMUSG00000007411.17_111540957_111622605_4	chr12	+	3432	17	NNC	ENSMUSG00000007411.17	novel	3458	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	6909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAGTAGATTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	111540956	111622605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613123_111613283_111613904_111614163_111621704
ENSMUSG00000007411.17_111541211_111622049_1	chr12	+	2344	17	FSM	ENSMUSG00000007411.17	ENST00000677360.1	3165	17	247	574	-191	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGTAATTATGGTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	111541210	111622049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111541536_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ENSMUSG00000007411.17_111590943_111622594_1	chr12	+	2302	12	ISM	ENSMUSG00000007411.17	ENSMUST00000221459.2	2807	18	49458	0	49458	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	111590942	111622594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ENSMUSG00000007411.17_111594680_111621759_1	chr12	+	1033	8	ISM	ENSMUSG00000007411.17	ENST00000676897.1	3526	18	53748	887	53195	-290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCTTCACCTGGAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	111594679	111621759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613123_111613283_111613904_111614163_111618391_111618419_111621703
ENSMUSG00000007411.17_111595394_111622049_1	chr12	+	1109	6	ISM	ENSMUSG00000007411.17	ENST00000676938.1	2883	17	54464	111	53909	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGTAATTATGGTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	111595393	111622049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
ENSMUSG00000007411.17_111595448_111621862_1	chr12	+	1027	7	ISM	ENSMUSG00000007411.17	ENST00000676897.1	3526	18	54516	784	53963	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGAGCGCTTCCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	111595447	111621862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111595550_111600050_111600269_111606370_111606475_111613123_111613283_111613904_111614163_111618391_111618419_111621703
ENSMUSG00000007411.17_111595500_111621914_1	chr12	+	1027	7	ISM	ENSMUSG00000007411.17	ENST00000676897.1	3526	18	54568	732	54015	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTACAGTGGGAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	111595499	111621914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111595550_111600050_111600269_111606370_111606475_111613123_111613283_111613904_111614163_111618391_111618419_111621703
ENSMUSG00000007411.17_111600050_111622049_1	chr12	+	1113	6	ISM	ENSMUSG00000007411.17	ENST00000676897.1	3526	18	59118	597	58565	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGTAATTATGGTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	111600049	111622049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111600269_111606370_111606475_111613123_111613283_111613904_111614163_111618391_111618419_111621703
ENSMUSG00000007411.17_111600050_111622160_1	chr12	+	1065	5	ISM	ENSMUSG00000007411.17	ENST00000676938.1	2883	17	59120	0	58565	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAAAGTCTGAGGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	111600049	111622160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
ENSMUSG00000007411.17_111600186_111622415_1	chr12	+	1157	4	ISM	ENSMUSG00000007411.17	ENST00000216288.11	2828	16	58784	237	58701	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTACAGTTGCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	111600185	111622415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111600269_111606370_111606475_111613904_111614163_111621703
ENSMUSG00000007411.17_111613136_111622278_1	chr12	+	1007	4	ISM	ENSMUSG00000007411.17	ENST00000676897.1	3526	18	72204	368	71651	118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGAGTGTAACACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	111613135	111622278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111613283_111613904_111614163_111618391_111618419_111621703
ENSMUSG00000007411.17_111613178_111622340_1	chr12	+	1027	4	ISM	ENSMUSG00000007411.17	ENST00000676897.1	3526	18	72246	306	71693	180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTGTTTTGGAAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	111613177	111622340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111613283_111613904_111614163_111618391_111618419_111621703
ENSMUSG00000007411.17_111613223_111622402_1	chr12	+	1044	4	ISM	ENSMUSG00000007411.17	ENST00000676897.1	3526	18	72291	244	71738	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGGTGCTAAAACATT	NA	NA	NA	NA	NA	NA	NA	NA	111613222	111622402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111613283_111613904_111614163_111618391_111618419_111621703
ENSMUSG00000007411.17_111614074_111622623_1	chr12	+	1036	3	ISM	ENSMUSG00000007411.17	ENST00000678619.1	3149	16	73144	-5	72589	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATAATTAAAAATTCACT	NA	NA	NA	NA	NA	NA	NA	NA	111614073	111622623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111614163_111618391_111618419_111621703
ENSMUSG00000007415.16_3691498_3696909_1	chr5	-	453	4	ISM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	1025	1537	897	-208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATTTCCCACGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	3696909	3691497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783
ENSMUSG00000007415.16_3693618_3697481_1	chr5	-	412	4	FSM	ENSMUSG00000007415.16	ENSMUST00000119783.2	1278	4	325	541	325	-541	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCATTCCTACCCTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	3697481	3693617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_3693742_3694880_3694941_3696783_3696910_3697379
ENSMUSG00000007458.15_122286071_122290270_1	chr6	+	288	3	ISM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	392	4369	392	-4369	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCCGGGAAGCTAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	122286070	122290270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_122286126_122289192_122289373_122290217
ENSMUSG00000007458.15_122289236_122292037_1	chr6	+	326	3	ISM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	3557	2602	3557	-2602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGGGGTGATGAATATG	NA	NA	NA	NA	NA	NA	NA	NA	122289235	122292037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_122289373_122290217_122290385_122292015
ENSMUSG00000007458.15_122289247_122294193_1	chr6	+	1568	6	ISM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	3568	446	3568	-446	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1571	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGGAGGCTCTGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	122289246	122294193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
ENSMUSG00000007458.15_122289295_122292081_1	chr6	+	311	3	ISM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	3616	2558	3616	-2558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGCAGTGGTGATGATC	NA	NA	NA	NA	NA	NA	NA	NA	122289294	122292081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_122289373_122290217_122290385_122292015
ENSMUSG00000007458.15_122290216_122292331_1	chr6	+	348	3	ISM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	4537	2308	4537	-2308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCTGGCCTGTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	122290215	122292331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_122290385_122292015_122292126_122292262
ENSMUSG00000007458.15_122290329_122293022_1	chr6	+	311	4	ISM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	4650	1617	4650	-1617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTCTATATCATTGGG	NA	NA	NA	NA	NA	NA	NA	NA	122290328	122293022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_122290385_122292015_122292126_122292262_122292394_122293008
ENSMUSG00000007458.15_122292039_122294503_1	chr6	+	1562	4	ISM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	6360	136	6360	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCTATACAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	122292038	122294503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_122292126_122292262_122292394_122293008_122293136_122293286
ENSMUSG00000007458.15_122292300_122293390_1	chr6	+	325	3	ISM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	6621	1249	6621	-1249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGCTACCAATGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	122292299	122293390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_122292394_122293008_122293136_122293286
ENSMUSG00000007476.19_30127734_30146049_1	chr2	+	1063	3	ISM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	0	7753	0	-7748	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAAGTTCGACGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	30127733	30146049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30127818_30130580_30130690_30145179
ENSMUSG00000007476.19_30146669_30152177_1	chr2	+	994	2	ISM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	18935	1625	18935	-1620	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGATGGGCAGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	30146668	30152177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30147345_30151859
ENSMUSG00000007476.19_30146745_30152266_1	chr2	+	1007	2	ISM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	19011	1536	19011	-1531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCCCGCTGGGACATGG	NA	NA	NA	NA	NA	NA	NA	NA	30146744	30152266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30147345_30151859
ENSMUSG00000007476.19_30146828_30152338_1	chr2	+	996	2	ISM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	19094	1464	19094	-1459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCAGTATTTGGACAATC	NA	NA	NA	NA	NA	NA	NA	NA	30146827	30152338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30147345_30151859
ENSMUSG00000007564.16_21165573_21182001_1	chr17	+	1713	12	ISM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	0	4177	0	-4177	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCACCCCAACTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	21165572	21182001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846
ENSMUSG00000007564.16_21165749_21185514_1	chr17	+	1694	14	ISM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	176	664	176	-664	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2038	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAAGCCCATCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	21165748	21185514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500
ENSMUSG00000007564.16_21171653_21185735_1	chr17	+	1646	14	ISM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	6080	443	6080	-443	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2034	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAAGAAGAAGCATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	21171652	21185735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ENSMUSG00000007564.16_21174895_21185811_1	chr17	+	1661	13	ISM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	9322	367	9322	-367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGCAAATGACTGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	21174894	21185811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ENSMUSG00000007564.16_21174961_21185846_1	chr17	+	1630	13	ISM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	9388	332	9388	-332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1787	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCAGGCTCCTCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	21174960	21185846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ENSMUSG00000007564.16_21176174_21185991_1	chr17	+	1634	12	ISM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	10601	187	10601	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2033	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGAGATGGGAGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	21176173	21185991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ENSMUSG00000007564.16_21177040_21186179_1	chr17	+	1640	11	ISM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	11467	-1	11467	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1855	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTAGTAATCGGAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	21177039	21186179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ENSMUSG00000007570.17_28532546_28537093_1	chr17	+	1242	6	ISM	ENSMUSG00000007570.17	ENSMUST00000114804.11	1842	9	0	8449	0	-8449	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCCTCTGTCCCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	28532545	28537093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006
ENSMUSG00000007570.17_28534627_28545258_1	chr17	+	1193	8	ISM	ENSMUSG00000007570.17	ENSMUST00000114804.11	1842	9	2081	284	2081	-284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTCAGAACACACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	28534626	28545258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28545125
ENSMUSG00000007589.10_55916505_55917379_1	chr14	-	511	3	ISM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	1898	1182	1823	-1182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCATATTTACTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	55917379	55916504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55916867_55916970_55917063_55917322
ENSMUSG00000007589.10_55916672_55917625_1	chr14	-	506	4	ISM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	1652	1349	1577	-1349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGACTTGAGTTGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	55917625	55916671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471
ENSMUSG00000007589.10_55916790_55917755_1	chr14	-	518	4	ISM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	1522	1467	1447	-1467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATTCCTTTCTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	55917755	55916789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471
ENSMUSG00000007589.10_55916992_55917863_1	chr14	-	528	3	ISM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	1414	1669	1339	-1669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAACCAGAAGGAAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	55917863	55916991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55917063_55917322_55917388_55917471
ENSMUSG00000007589.10_55917867_55918924_1	chr14	-	507	6	ISM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	353	2544	278	-2544	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCTCATCAGCAAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	55918924	55917866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ENSMUSG00000007610.16_71941115_71941812_1	chr8	+	468	2	ISM	ENSMUSG00000007610.16	ENSMUST00000007754.13	2800	9	368	4232	368	-3596	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCACCAGCGGTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	71941114	71941812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71941485_71941714
ENSMUSG00000007610.16_71942986_71944899_1	chr8	+	695	5	ISM	ENSMUSG00000007610.16	ENST00000600625.5	1023	6	2	509	2	-509	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCGACATAGCCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	71942985	71944899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71943182_71943538_71943612_71943709_71943854_71944068_71944235_71944783
ENSMUSG00000007610.16_71943123_71945234_1	chr8	+	710	6	FSM	ENSMUSG00000007610.16	ENST00000600625.5	1023	6	139	174	139	-174	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACCTCCAGGGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	71943122	71945234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_71943182_71943538_71943612_71943709_71943854_71944068_71944235_71944783_71945000_71945182
ENSMUSG00000007610.16_71943558_71945303_1	chr8	+	695	5	NNC	ENSMUSG00000007610.16	novel	1023	6	NA	NA	574	-105	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCCCTGCGCCAGGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	71943557	71945303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_71943612_71943709_71943854_71944068_71944235_71944789_71945000_71945182
ENSMUSG00000007617.19_93441427_93540674_1	chr13	+	3381	9	FSM	ENSMUSG00000007617.19	ENSMUST00000060490.11	2765	9	-240	-376	120	376	multi-exon	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATATGGTAAGCGAATT	NA	NA	NA	NA	NA	NA	NA	NA	93441426	93540674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ENSMUSG00000007617.19_93441487_93540737_1	chr13	+	3377	9	NNC	ENSMUSG00000007617.19	novel	2765	9	NA	NA	-124	439	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCATTTAATGGGAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	93441486	93540737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492454_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ENSMUSG00000007617.19_93441611_93540876_1	chr13	+	3392	9	NNC	ENSMUSG00000007617.19	novel	2765	9	NA	NA	0	578	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTAAAATTGGAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	93441610	93540876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529542_93529617_93538548
ENSMUSG00000007617.19_93478359_93541204_1	chr13	+	3379	9	ISM	ENSMUSG00000007617.19	ENST00000334082.11	5327	10	37761	640	33817	-433	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATTATATAGACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	93478358	93541204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548_93541123_93541175
ENSMUSG00000007617.19_93483128_93541307_1	chr13	+	3369	8	ISM	ENSMUSG00000007617.19	ENST00000334082.11	5327	10	42530	537	38586	-330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATAGTGTTGGGGACTA	NA	NA	NA	NA	NA	NA	NA	NA	93483127	93541307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548_93541123_93541175
ENSMUSG00000007617.19_93483189_93541372_1	chr13	+	3373	8	ISM	ENSMUSG00000007617.19	ENST00000334082.11	5327	10	42591	472	38647	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTCCCATCTGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	93483188	93541372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548_93541123_93541175
ENSMUSG00000007617.19_93492533_93541637_1	chr13	+	3440	6	ISM	ENSMUSG00000007617.19	ENST00000334082.11	5327	10	51935	207	47991	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGCCTGGAAAATTAGT	NA	NA	NA	NA	NA	NA	NA	NA	93492532	93541637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548_93541123_93541175
ENSMUSG00000007617.19_93528198_93541845_1	chr13	+	3437	4	ISM	ENSMUSG00000007617.19	ENST00000334082.11	5327	10	87600	-1	83656	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAAATGGTAAGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	93528197	93541845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_93528310_93529535_93529617_93538548_93541123_93541175
ENSMUSG00000007653.13_42312177_42484658_1	chr11	+	401	5	ISM	ENSMUSG00000007653.13	ENST00000517547.5	1348	7	54	33242	0	-33060	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAACATTGGCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	42312176	42484658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_42312254_42313407_42313476_42420238_42420322_42482684_42482823_42484623
ENSMUSG00000007653.13_42312177_42488491_1	chr11	+	864	7	ISM	ENSMUSG00000007653.13	ENST00000517901.5	1700	8	151	29443	0	-29227	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	906	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGGAATACGCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	42312176	42488491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_42312254_42313407_42313476_42378022_42378244_42420238_42420322_42482684_42482823_42484623_42484777_42488367
ENSMUSG00000007653.13_42313406_42488612_1	chr11	+	910	6	ISM	ENSMUSG00000007653.13	ENSMUST00000192403.2	1539	10	1229	29106	1229	-29106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACATTTACACAGAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	42313405	42488612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_42313476_42378022_42378244_42420238_42420322_42482684_42482823_42484623_42484777_42488367
ENSMUSG00000007653.13_42378022_42517465_1	chr11	+	936	6	ISM	ENSMUSG00000007653.13	ENST00000517901.5	1700	8	65996	469	65845	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAATGCTTGCCTATGATG	NA	NA	NA	NA	NA	NA	NA	NA	42378021	42517465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_42378244_42420238_42420322_42482684_42482823_42484623_42484777_42488367_42488613_42517370
ENSMUSG00000007653.13_42420238_42517718_1	chr11	+	968	5	ISM	ENSMUSG00000007653.13	ENST00000517547.5	1348	7	108115	182	108061	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACAGCCTTCCGTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	42420237	42517718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_42420322_42482684_42482823_42484623_42484777_42488367_42488613_42517370
ENSMUSG00000007653.13_42482722_42488468_1	chr11	+	355	3	ISM	ENSMUSG00000007653.13	ENSMUST00000192403.2	1539	10	170545	29250	170545	-29250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTCTTCGTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	42482721	42488468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_42482823_42484623_42484777_42488367
ENSMUSG00000007653.13_42484621_42488612_1	chr11	+	401	2	ISM	ENSMUSG00000007653.13	ENSMUST00000192403.2	1539	10	172444	29106	172444	-29106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACATTTACACAGAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	42484620	42488612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_42484777_42488367
ENSMUSG00000007653.13_42484621_42517934_1	chr11	+	965	3	ISM	ENSMUSG00000007653.13	ENST00000517547.5	1348	7	172498	-34	172444	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2771	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGTACACATGCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	42484620	42517934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_42484777_42488367_42488613_42517370
ENSMUSG00000007653.13_42484727_42517934_1	chr11	+	859	3	ISM	ENSMUSG00000007653.13	ENST00000517547.5	1348	7	172604	-34	172550	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGTACACATGCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	42484726	42517934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_42484777_42488367_42488613_42517370
ENSMUSG00000007655.17_17306334_17339689_1	chr6	+	888	3	FSM	ENSMUSG00000007655.17	ENSMUST00000007799.13	2522	3	0	1634	0	171	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTGGCTAAAATATAAACA	NA	NA	NA	NA	NA	NA	NA	NA	17306333	17339689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_17306479_17307879_17308045_17339111
ENSMUSG00000007655.17_17306344_17339750_1	chr6	+	939	3	FSM	ENSMUSG00000007655.17	ENSMUST00000007799.13	2522	3	10	1573	0	232	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAGGGAAGAGTACCAAC	NA	NA	NA	NA	NA	NA	NA	NA	17306343	17339750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_17306479_17307879_17308045_17339111
ENSMUSG00000007655.17_17306422_17308020_1	chr6	+	165	2	ISM	ENSMUSG00000007655.17	ENST00000393470.1	582	3	35	31449	0	-182	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCAACGACGACGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	17306421	17308020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_17306479_17307912
ENSMUSG00000007655.17_17306422_17339792_1	chr6	+	903	3	FSM	ENSMUSG00000007655.17	ENSMUST00000007799.13	2522	3	88	1531	0	274	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATGATGTCATACAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	17306421	17339792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_17306479_17307879_17308045_17339111
ENSMUSG00000007655.17_17307722_17340286_1	chr6	+	1498	2	FSM	ENSMUSG00000007655.17	ENSMUST00000115453.2	2746	2	83	1165	83	-142	multi-exon	FALSE	canonical	NA	NA	NA	NA	1334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCAGACAAATGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	17307721	17340286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_17308045_17339111
ENSMUSG00000007655.17_17307878_17340465_1	chr6	+	1521	2	FSM	ENSMUSG00000007655.17	ENSMUST00000115453.2	2746	2	239	986	239	37	multi-exon	FALSE	canonical	NA	NA	NA	NA	1721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATGATTTAGGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	17307877	17340465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_17308045_17339111
ENSMUSG00000007656.14_74944896_74967595_1	chr9	+	3953	4	NNC	ENSMUSG00000007656.14	novel	3963	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTTTTGTCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	74944895	74967595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_74945002_74945188_74945244_74959524_74959638_74963916
ENSMUSG00000007656.14_74944896_74967595_3	chr9	+	3957	4	NNC	ENSMUSG00000007656.14	novel	3963	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTTTTGTCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	74944895	74967595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_74945002_74945188_74945244_74959514_74959638_74963922
ENSMUSG00000007659.19_152622898_152672361_1	chr2	-	2055	3	FSM	ENSMUSG00000007659.19	ENST00000307677.5	2553	3	188	310	-131	-289	multi-exon	FALSE	canonical	NA	NA	NA	NA	1723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTACATATTCGAGACTAG	NA	NA	NA	NA	NA	NA	NA	NA	152672361	152622897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152624203_152671346_152672041_152672305
ENSMUSG00000007659.19_152622950_152672411_1	chr2	-	2053	3	FSM	ENSMUSG00000007659.19	ENST00000307677.5	2553	3	138	362	138	-341	multi-exon	FALSE	canonical	NA	NA	NA	NA	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCATCCCTGTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	152672411	152622949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152624203_152671346_152672041_152672305
ENSMUSG00000007659.19_152623003_152672538_1	chr2	-	2127	3	FSM	ENSMUSG00000007659.19	ENST00000307677.5	2553	3	11	415	11	-394	multi-exon	FALSE	canonical	NA	NA	NA	NA	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCCTGGCTAGGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	152672538	152623002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152624203_152671346_152672041_152672305
ENSMUSG00000007659.19_152623331_152672006_1	chr2	-	1343	2	ISM	ENSMUSG00000007659.19	ENST00000422920.2	2187	3	1197	-70	224	70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCCTGGCTCCCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	152672006	152623330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_152624203_152671535
ENSMUSG00000007659.19_152623669_152672596_1	chr2	-	1312	3	FSM	ENSMUSG00000007659.19	ENST00000422920.2	2187	3	607	268	-10	-268	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTGTGGCCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	152672596	152623668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152624203_152671535_152672023_152672305
ENSMUSG00000007659.19_152623844_152672768_1	chr2	-	1309	3	FSM	ENSMUSG00000007659.19	ENST00000422920.2	2187	3	435	443	-182	-443	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCACAAGGTTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	152672768	152623843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152624203_152671535_152672023_152672305
ENSMUSG00000007659.19_152623975_152672894_1	chr2	-	1304	3	FSM	ENSMUSG00000007659.19	ENST00000422920.2	2187	3	309	574	-308	-574	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGCAACTCACGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	152672894	152623974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152624203_152671535_152672023_152672305
ENSMUSG00000007670.11_57328051_57330390_1	chr17	-	2176	3	ISM	ENSMUSG00000007670.11	ENSMUST00000007814.10	3978	18	8098	0	8098	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCCTGCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	57330390	57328050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_57329971_57330058_57330137_57330212
ENSMUSG00000007682.8_90696116_90705050_1	chr12	-	496	2	FSM	ENSMUSG00000007682.8	ENST00000557125.1	504	2	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATCTATTATTTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	90705050	90696115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_90696572_90705010
ENSMUSG00000007721.7_71320871_71326452_1	chr8	-	1229	5	FSM	ENSMUSG00000007721.7	ENSMUST00000007865.7	1356	5	127	0	127	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCATGTCTGTATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	71326452	71320870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_71321290_71321380_71321496_71321576_71321752_71322548_71322719_71326102
ENSMUSG00000007739.11_22940519_22946038_1	chr11	+	614	4	ISM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	0	7742	0	-7113	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTAGAGTATAATATAC	NA	NA	NA	NA	NA	NA	NA	NA	22940518	22946038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929
ENSMUSG00000007739.11_22940650_22946420_1	chr11	+	589	5	ISM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	131	7360	0	-6731	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1062	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTAAATAGCGCAACTA	NA	NA	NA	NA	NA	NA	NA	NA	22940649	22946420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314
ENSMUSG00000007739.11_22940822_22947096_1	chr11	+	518	6	ISM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	303	6684	172	-6055	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGCCACAGCTACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	22940821	22947096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032
ENSMUSG00000007739.11_22940863_22947154_1	chr11	+	535	6	ISM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	344	6626	213	-5997	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCGTCTCTGATTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	22940862	22947154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032
ENSMUSG00000007739.11_22944297_22947735_1	chr11	+	598	5	ISM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	3778	6045	3647	-5416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	970	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAAATCCAAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	22944296	22947735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602
ENSMUSG00000007739.11_22945989_22949087_1	chr11	+	503	5	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	5339	4064	5339	-4064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGAGCCTATATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	22945988	22949087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032
ENSMUSG00000007739.11_22946380_22950924_1	chr11	+	540	5	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	5730	2227	5730	-2227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	795	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAGAAGACATTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	22946379	22950924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857
ENSMUSG00000007739.11_22947602_22951690_1	chr11	+	613	5	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	6952	1461	6952	-1461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGCATCATATTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	22947601	22951690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559
ENSMUSG00000007739.11_22949033_22952180_1	chr11	+	493	5	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	8383	971	8383	-971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGTGCTCCAGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	22949032	22952180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166
ENSMUSG00000007739.11_22949056_22952258_1	chr11	+	548	5	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	8406	893	8406	-893	internal_fragment	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCGTGCTTTCGCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	22949055	22952258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166
ENSMUSG00000007739.11_22949130_22952285_1	chr11	+	501	5	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	8480	866	8480	-866	internal_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTCCATCTACACTA	NA	NA	NA	NA	NA	NA	NA	NA	22949129	22952285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166
ENSMUSG00000007739.11_22950937_22952401_1	chr11	+	495	4	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	10287	750	10287	-750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATAGTCTTGGTGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	22950936	22952401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22950955_22951361_22951473_22951559_22951691_22952166
ENSMUSG00000007739.11_22951360_22952930_1	chr11	+	593	4	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	10710	221	10710	-221	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1093	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGCGAATAGAGTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	22951359	22952930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22951473_22951559_22951691_22952166_22952402_22952816
ENSMUSG00000007739.11_22951557_22953151_1	chr11	+	498	4	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	10907	0	10907	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGATAAAAGGATGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	22951556	22953151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22951691_22952166_22952402_22952816_22952931_22953136
ENSMUSG00000007739.11_22952207_22953325_1	chr11	+	498	3	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	11557	-174	11557	174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAACTCCATATTAACT	NA	NA	NA	NA	NA	NA	NA	NA	22952206	22953325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22952402_22952816_22952931_22953136
ENSMUSG00000007739.11_22952815_22953497_1	chr11	+	477	2	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	12165	-346	12165	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTTGTTTTGTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	22952814	22953497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22952931_22953136
ENSMUSG00000007739.11_22952859_22953556_1	chr11	+	492	2	ISM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	12340	224	12209	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGCTAGAATTAACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	22952858	22953556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22952931_22953136
ENSMUSG00000007739.11_22952895_22953621_1	chr11	+	521	2	ISM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	12376	159	12245	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	825	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGCATACTACCAAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	22952894	22953621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22952931_22953136
ENSMUSG00000007783.11_44609004_44611734_1	chr7	-	753	6	ISM	ENSMUSG00000007783.11	ENST00000405931.6	2285	18	11559	0	11559	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATTCGGATTATAGATA	NA	NA	NA	NA	NA	NA	NA	NA	44611734	44609003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569
ENSMUSG00000007783.11_44609267_44612283_1	chr7	-	775	6	ISM	ENSMUSG00000007783.11	ENST00000405931.6	2285	18	11010	263	11010	-263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGGAACTTAAGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	44612283	44609266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166
ENSMUSG00000007783.11_44610217_44614595_1	chr7	-	726	6	ISM	ENSMUSG00000007783.11	ENST00000405931.6	2285	18	8698	1213	8698	-1213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCTCCATATGCAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	44614595	44610216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507
ENSMUSG00000007783.11_44611675_44616134_1	chr7	-	747	6	ISM	ENSMUSG00000007783.11	ENST00000405931.6	2285	18	7159	2671	7159	-2671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCACGTCTTCCCCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	44616134	44611674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049
ENSMUSG00000007783.11_44612167_44616296_1	chr7	-	763	6	ISM	ENSMUSG00000007783.11	ENST00000405931.6	2285	18	6997	3163	6997	-3163	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGACTGGCCTCGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	44616296	44612166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220
ENSMUSG00000007783.11_44613408_44619868_1	chr7	-	680	7	ISM	ENSMUSG00000007783.11	ENST00000405931.6	2285	18	3425	4404	3425	-4404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTCTTCTCCAATGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	44619868	44613407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616296_44616481_44616557_44619828
ENSMUSG00000007783.11_44614567_44620060_1	chr7	-	712	7	ISM	ENSMUSG00000007783.11	ENST00000405931.6	2285	18	3233	5563	3233	-5563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCAGCTTCCCTGGACGC	NA	NA	NA	NA	NA	NA	NA	NA	44620060	44614566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44614691_44614794_44614991_44616049_44616135_44616220_44616296_44616481_44616557_44619828_44619967_44620041
ENSMUSG00000007783.11_44614635_44620095_1	chr7	-	679	7	ISM	ENSMUSG00000007783.11	ENST00000405931.6	2285	18	3198	5631	3198	-5631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGGAAGGGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	44620095	44614634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44614691_44614794_44614991_44616049_44616135_44616220_44616296_44616481_44616557_44619828_44619967_44620041
ENSMUSG00000007783.11_44614794_44620710_1	chr7	-	723	7	ISM	ENSMUSG00000007783.11	ENST00000405931.6	2285	18	2583	5790	2583	-5790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAACCAGTAGCCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	44620710	44614793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44614991_44616049_44616135_44616220_44616296_44616481_44616557_44619828_44619967_44620041_44620144_44620659
ENSMUSG00000007783.11_44616287_44623201_1	chr7	-	687	7	ISM	ENSMUSG00000007783.11	ENST00000405931.6	2285	18	92	7283	92	-7283	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGCAATGCTGTGCATAC	NA	NA	NA	NA	NA	NA	NA	NA	44623201	44616286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44616296_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150
ENSMUSG00000007805.5_91729192_91775435_1	chr1	+	1005	2	FSM	ENSMUSG00000007805.5	ENSMUST00000007949.4	1329	2	9	315	0	-302	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATATTTTTAAATAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	91729191	91775435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_91729872_91775110
ENSMUSG00000007805.5_91729192_91775750_1	chr1	+	1317	2	FSM	ENSMUSG00000007805.5	ENST00000612363.2	1271	2	-33	-13	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCGTGTCCCCTCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	91729191	91775750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_91729888_91775129
ENSMUSG00000007805.5_91729539_91775750_1	chr1	+	973	2	FSM	ENSMUSG00000007805.5	ENSMUST00000007949.4	1329	2	356	0	314	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCGTGTCCCCTCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	91729538	91775750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_91729872_91775110
ENSMUSG00000007805.5_91729595_91775750_1	chr1	+	917	2	FSM	ENSMUSG00000007805.5	ENSMUST00000007949.4	1329	2	412	0	370	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCGTGTCCCCTCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	91729594	91775750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_91729872_91775110
ENSMUSG00000007815.14_108183638_108204816_1	chr9	+	224	3	ISM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	310	10317	310	-10317	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGATGGAGCTTGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	108183637	108204816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108183753_108192506_108192582_108204782
ENSMUSG00000007815.14_108192543_108212308_1	chr9	+	377	4	ISM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	9215	2825	9215	-2825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTGGTTGGGAACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	108192542	108212308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108192582_108204782_108204941_108208069_108208191_108212249
ENSMUSG00000007815.14_108204779_108212380_1	chr9	+	414	3	ISM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	21451	2753	21451	-2753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTTGTGGGGGCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	108204778	108212380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108204941_108208069_108208191_108212249
ENSMUSG00000007815.14_108204883_108213933_1	chr9	+	397	4	ISM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	21555	1200	21555	-1200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	730	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGAGAGAGGTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	108204882	108213933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108204941_108208069_108208191_108212249_108212381_108213846
ENSMUSG00000007815.14_108212249_108214056_1	chr9	+	339	2	NNC	ENSMUSG00000007815.14	novel	2197	6	NA	NA	28921	-1077	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTTTATTAATCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	108212248	108214056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108212381_108213849
ENSMUSG00000007815.14_108212288_108214111_1	chr9	+	358	2	ISM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	28960	1022	28960	-1022	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCTAAGATTACAAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	108212287	108214111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108212381_108213846
ENSMUSG00000007815.14_108212299_108214118_1	chr9	+	351	2	NNC	ENSMUSG00000007815.14	novel	2197	6	NA	NA	28971	-1015	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTACAAATCAGAAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	108212298	108214118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108212381_108213849
ENSMUSG00000007827.11_118480008_118502826_1	chr6	-	2680	13	ISM	ENSMUSG00000007827.11	ENSMUST00000112830.3	6930	34	36361	1739	36361	-1739	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAATATATGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	118502826	118480007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693
ENSMUSG00000007833.16_44790657_44794113_1	chr7	-	1356	4	ISM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	9884	328	9868	-328	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAGAGGGCATCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	44794113	44790656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936
ENSMUSG00000007833.16_44790730_44794113_1	chr7	-	1283	4	ISM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	9884	401	9868	-401	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGAGGTTGTTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44794113	44790729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936
ENSMUSG00000007833.16_44790881_44794413_1	chr7	-	1280	5	ISM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	9584	552	9568	-552	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTAGGTTTGTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44794413	44790880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290
ENSMUSG00000007833.16_44791259_44795682_1	chr7	-	1386	9	ISM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	8315	930	8299	610	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	44795682	44791258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617
ENSMUSG00000007833.16_44794317_44797388_1	chr7	-	1292	10	ISM	ENSMUSG00000007833.16	ENSMUST00000107815.4	2685	16	6620	2448	6593	-382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGCTCATCAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	44797388	44794316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307
ENSMUSG00000007833.16_44794366_44797441_1	chr7	-	1296	10	ISM	ENSMUSG00000007833.16	ENSMUST00000107815.4	2685	16	6567	2497	6540	-431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGCTATGTAGCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	44797441	44794365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307
ENSMUSG00000007833.16_44794936_44798126_1	chr7	-	1301	10	ISM	ENSMUSG00000007833.16	ENSMUST00000107815.4	2685	16	5882	3067	5855	-1001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTCTGCCGTCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	44798126	44794935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037
ENSMUSG00000007833.16_44795616_44797004_1	chr7	-	619	4	ISM	ENSMUSG00000007833.16	ENST00000540132.5	1633	11	7003	1681	6977	-1681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCCTGAGGCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	44797004	44795615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44795714_44796046_44796233_44796585_44796739_44796822
ENSMUSG00000007833.16_44796168_44797360_1	chr7	-	378	4	ISM	ENSMUSG00000007833.16	ENST00000455361.6	1968	14	6621	3552	6621	-2233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGCACAGATACGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	44797360	44796167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44796233_44796822_44797005_44797148_44797227_44797307
ENSMUSG00000007833.16_44796635_44803990_1	chr7	-	539	4	ISM	ENSMUSG00000007833.16	ENST00000540132.5	1633	11	17	2700	7	-2700	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCTGTGGAGGGTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	44803990	44796634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44796739_44796822_44797005_44797148_44797227_44803815
ENSMUSG00000007833.16_44797420_44803877_1	chr7	-	359	4	ISM	ENSMUSG00000007833.16	ENST00000455361.6	1968	14	104	4804	104	-3485	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTCGAGAGGTTCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	44803877	44797419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44797487_44798037_44798165_44799087_44799191_44803815
ENSMUSG00000007850.17_50268592_50272325_1	chr11	+	1003	4	ISM	ENSMUSG00000007850.17	ENST00000356731.9	3015	13	351	5026	-4	-5026	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGGGGAGGAGTACGG	NA	NA	NA	NA	NA	NA	NA	NA	50268591	50272325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50269255_50270294_50270451_50270647_50270792_50272285
ENSMUSG00000007850.17_50268592_50272378_1	chr11	+	1056	4	ISM	ENSMUSG00000007850.17	ENST00000356731.9	3015	13	351	4973	-4	-4973	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCTGAAAAGGCTCTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	50268591	50272378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50269255_50270294_50270451_50270647_50270792_50272285
ENSMUSG00000007850.17_50268762_50273445_1	chr11	+	1014	5	ISM	ENSMUSG00000007850.17	ENSMUST00000077817.8	2126	13	166	3910	166	-3906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTCCCTATGACAGACC	NA	NA	NA	NA	NA	NA	NA	NA	50268761	50273445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363
ENSMUSG00000007850.17_50269118_50276750_1	chr11	+	1477	12	FSM	ENSMUSG00000007850.17	ENST00000510411.5	2062	12	-16	601	-16	-601	multi-exon	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATTTTTTAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	50269117	50276750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274597_50275470_50275564_50275967_50276018_50276603
ENSMUSG00000007850.17_50270288_50276921_1	chr11	+	1509	11	NNC	ENSMUSG00000007850.17	novel	2062	12	NA	NA	1154	-430	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAATTCCTAGCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	50270287	50276921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274597_50275470_50275564_50275967_50276018_50276612
ENSMUSG00000007850.17_50270288_50276921_2	chr11	+	1518	11	ISM	ENSMUSG00000007850.17	ENST00000510411.5	2062	12	1154	430	1154	-430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAATTCCTAGCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	50270287	50276921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274597_50275470_50275564_50275967_50276018_50276603
ENSMUSG00000007850.17_50270389_50277052_1	chr11	+	1548	11	ISM	ENSMUSG00000007850.17	ENST00000510411.5	2062	12	1255	299	1255	-299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGCTTTTTTGTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	50270388	50277052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274597_50275470_50275564_50275967_50276018_50276603
ENSMUSG00000007850.17_50270646_50277052_1	chr11	+	1548	11	ISM	ENSMUSG00000007850.17	ENST00000393432.8	2243	14	2088	299	1512	-299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGCTTTTTTGTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	50270645	50277052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ENSMUSG00000007850.17_50272284_50277225_1	chr11	+	1517	9	ISM	ENSMUSG00000007850.17	ENST00000510411.5	2062	12	3150	126	3150	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTTTTGGTCTTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	50272283	50277225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274597_50275470_50275564_50275967_50276018_50276603
ENSMUSG00000007850.17_50273362_50277354_1	chr11	+	1567	9	ISM	ENSMUSG00000007850.17	ENST00000393432.8	2243	14	4804	-3	4228	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	50273361	50277354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ENSMUSG00000007850.17_50273362_50277354_2	chr11	+	1507	8	ISM	ENSMUSG00000007850.17	ENST00000510411.5	2062	12	4228	-3	4228	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	50273361	50277354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274597_50275470_50275564_50275967_50276018_50276603
ENSMUSG00000007867.10_86131868_86208963_1	chr12	+	459	8	ISM	ENSMUSG00000007867.10	ENSMUST00000222821.2	783	9	2507	270	2507	-269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGACTGGGACCATCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	86131867	86208963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_86131961_86158384_86158450_86185566_86185600_86186825_86186870_86207922_86207996_86208225_86208302_86208760_86208824_86208951
ENSMUSG00000007867.10_86158383_86208963_1	chr12	+	368	7	ISM	ENSMUSG00000007867.10	ENSMUST00000222821.2	783	9	29022	270	29022	-269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGACTGGGACCATCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	86158382	86208963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_86158450_86185566_86185600_86186825_86186870_86207922_86207996_86208225_86208302_86208760_86208824_86208951
ENSMUSG00000007877.3_98274637_98275514_1	chr11	+	613	3	FSM	ENSMUSG00000007877.3	ENST00000578283.1	579	3	-33	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGCCTAGGTGTCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	98274636	98275514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_98274783_98274977_98275035_98275104
ENSMUSG00000007877.3_98274637_98275514_2	chr11	+	606	3	NNC	ENSMUSG00000007877.3	novel	948	2	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGCCTAGGTGTCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	98274636	98275514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_98274783_98274977_98275037_98275113
ENSMUSG00000007880.17_133409280_133413053_1	chr4	-	1087	3	ISM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	67869	2961	67869	-2026	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCAGGACAGAGAACATT	NA	NA	NA	NA	NA	NA	NA	NA	133413053	133409279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133409367_133411745_133411877_133412184
ENSMUSG00000007880.17_133411783_133413604_1	chr4	-	1051	3	ISM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	67318	5464	67318	-4529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGACAACAGCATTATGA	NA	NA	NA	NA	NA	NA	NA	NA	133413604	133411782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133411877_133412184_133413077_133413539
ENSMUSG00000007880.17_133412780_133416416_1	chr4	-	1044	7	ISM	ENSMUSG00000007880.17	ENSMUST00000105897.10	8175	20	64506	6461	64506	-5526	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGGTTCCAGTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	133416416	133412779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133413077_133413539_133413637_133413729_133413868_133413950_133414102_133414514_133414691_133414848_133414982_133416364
ENSMUSG00000007880.17_133413753_133420189_1	chr4	-	1073	7	ISM	ENSMUSG00000007880.17	ENSMUST00000105897.10	8175	20	60733	7434	60733	-6499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAGCAGCAACAGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	133420189	133413752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133413868_133413950_133414102_133414514_133414691_133414848_133414982_133416364_133416573_133418380_133418591_133420109
ENSMUSG00000007880.17_133414536_133421185_1	chr4	-	1079	7	ISM	ENSMUSG00000007880.17	ENSMUST00000105897.10	8175	20	59737	8217	59737	-7282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGGCAGCATGAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	133421185	133414535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133414691_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068
ENSMUSG00000007880.17_133423259_133483785_1	chr4	-	1069	5	ISM	ENSMUSG00000007880.17	ENST00000430799.7	6462	20	288	16005	288	-16005	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGACCACTCTCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	133483785	133423258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133483705
ENSMUSG00000007880.17_133423381_133483905_1	chr4	-	1067	5	ISM	ENSMUSG00000007880.17	ENST00000430799.7	6462	20	168	16127	168	-16127	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGAGAGCAGAGCAATCC	NA	NA	NA	NA	NA	NA	NA	NA	133483905	133423380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133483705
ENSMUSG00000007888.16_70945808_70956069_1	chr8	+	1267	7	ISM	ENSMUSG00000007888.16	ENST00000684169.1	1282	8	-108	222	0	-222	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1078	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAACCTTAGTTTCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	70945807	70956069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70946051_70951246_70951529_70951742_70951873_70951979_70952150_70953533_70953692_70953759_70953929_70955954
ENSMUSG00000007888.16_70946011_70956289_1	chr8	+	1180	8	ISM	ENSMUSG00000007888.16	ENSMUST00000008032.14	1644	9	203	442	95	-2	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGGGTCTGGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	70946010	70956289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70946051_70951246_70951529_70951742_70951873_70951979_70952150_70953533_70953692_70953759_70953929_70955954_70956143_70956246
ENSMUSG00000007888.16_70951394_70956680_1	chr8	+	1203	8	ISM	ENSMUSG00000007888.16	ENSMUST00000008032.14	1644	9	5586	51	5478	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCCAAGAGTCTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	70951393	70956680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70951529_70951742_70951873_70951979_70952150_70953533_70953692_70953759_70953929_70955954_70956143_70956246_70956290_70956470
ENSMUSG00000007888.16_70951426_70956696_1	chr8	+	1175	7	NNC	ENSMUSG00000007888.16	novel	1644	9	NA	NA	5510	-35	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	882	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATAAATAAAGGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	70951425	70956696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_70951529_70951742_70951873_70951979_70952150_70953533_70953692_70953759_70953929_70955954_70956174_70956470
ENSMUSG00000007888.16_70951855_70956267_1	chr8	+	729	6	ISM	ENSMUSG00000007888.16	ENST00000684169.1	1282	8	5939	24	5939	-24	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGACGGGGTGCGGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	70951854	70956267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70951873_70951979_70952150_70953533_70953692_70953759_70953929_70955954_70956143_70956241
ENSMUSG00000007888.16_70951978_70956293_1	chr8	+	739	5	ISM	ENSMUSG00000007888.16	ENST00000684169.1	1282	8	6062	-2	6062	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTCTGGGTGAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	70951977	70956293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70952150_70953533_70953692_70953759_70953929_70955954_70956143_70956241
ENSMUSG00000007891.17_141929648_141941597_1	chr7	-	1949	9	FSM	ENSMUSG00000007891.17	ENSMUST00000151120.9	2127	9	178	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTGCTCTGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	141941597	141929647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ENSMUSG00000007891.17_141929648_141941597_2	chr7	-	1946	9	NNC	ENSMUSG00000007891.17	novel	2127	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTGCTCTGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	141941597	141929647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_141930476_141930569_141930669_141930762_141930901_141931065_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ENSMUSG00000007891.17_141929648_141941775_1	chr7	-	2121	9	NNC	ENSMUSG00000007891.17	novel	2127	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTGCTCTGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	141941775	141929647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937273_141939195_141939356_141941473
ENSMUSG00000007891.17_141929654_141941775_1	chr7	-	2118	9	NNC	ENSMUSG00000007891.17	novel	2127	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTATTGGTGTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	141941775	141929653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_141930476_141930569_141930669_141930762_141930901_141931065_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ENSMUSG00000007891.17_141930319_141937278_1	chr7	-	1174	6	FSM	ENSMUSG00000007891.17	ENST00000438213.6	1174	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTACTCTAACTTGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	141937278	141930318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_141930476_141930569_141930669_141930762_141931193_141934502_141934696_141936276_141936448_141937154
ENSMUSG00000007891.17_141930319_141937278_2	chr7	-	1007	7	NNC	ENSMUSG00000007891.17	novel	1012	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTACTCTAACTTGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	141937278	141930318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_141930476_141930569_141930669_141930767_141930908_141931069_141931193_141934502_141934696_141936276_141936448_141937154
ENSMUSG00000007891.17_141930319_141937278_3	chr7	-	1012	7	FSM	ENSMUSG00000007891.17	ENST00000236671.7	1012	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTACTCTAACTTGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	141937278	141930318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934696_141936276_141936448_141937154
ENSMUSG00000007892.9_61820566_61821703_1	chr9	-	378	3	FSM	ENSMUSG00000007892.9	ENSMUST00000008036.9	499	3	121	0	121	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGACTGGTCTCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	61821703	61820565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_61820804_61821169_61821245_61821638
ENSMUSG00000007892.9_61820691_61821703_1	chr9	-	247	3	NNC	ENSMUSG00000007892.9	novel	499	3	NA	NA	121	-125	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4082	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGCTGAGGAGAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	61821703	61820690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_61820804_61821169_61821245_61821644
ENSMUSG00000007892.9_61820747_61821824_1	chr9	-	318	3	FSM	ENSMUSG00000007892.9	ENSMUST00000008036.9	499	3	0	181	0	-181	multi-exon	FALSE	canonical	NA	NA	NA	NA	4377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGCAGCTGGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	61821824	61820746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_61820804_61821169_61821245_61821638
ENSMUSG00000007950.10_71909747_71910854_1	chr8	-	448	2	ISM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	5445	398	5445	-398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGGGCGGGGCCTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	71910854	71909746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71910022_71910681
ENSMUSG00000007950.10_71909969_71913942_1	chr8	-	494	4	ISM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	2357	620	2357	-620	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGTGTCCTGAAACGG	NA	NA	NA	NA	NA	NA	NA	NA	71913942	71909968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71910022_71910681_71910899_71911021_71911193_71913889
ENSMUSG00000007950.10_71910737_71913992_1	chr8	-	436	3	ISM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	2307	1388	2307	-1388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACGGCATGCACGACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	71913992	71910736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71910899_71911021_71911193_71913889
ENSMUSG00000007950.10_71910786_71914050_1	chr8	-	445	3	ISM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	2249	1437	2249	-1437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCGACGAGGTCTACCAC	NA	NA	NA	NA	NA	NA	NA	NA	71914050	71910785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71910899_71911021_71911193_71913889
ENSMUSG00000007950.10_71910836_71914103_1	chr8	-	448	3	ISM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	2196	1487	2196	-1487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCCTCCTTCGTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	71914103	71910835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71910899_71911021_71911193_71913889
ENSMUSG00000007950.10_71911058_71914219_1	chr8	-	465	2	ISM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	2080	1709	2080	-1709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGTCACCTTGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	71914219	71911057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71911193_71913889
ENSMUSG00000007950.10_71911126_71914273_1	chr8	-	451	2	ISM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	2026	1777	2026	-1777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGGGCCCCACGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	71914273	71911125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71911193_71913889
ENSMUSG00000007950.10_71914195_71916133_1	chr8	-	446	2	ISM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	166	4846	166	-4846	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCCGAAGAGGACCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	71916133	71914194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71914617_71916109
ENSMUSG00000007950.10_71914304_71916266_1	chr8	-	470	2	ISM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	33	4955	33	-4955	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCAGTGGCTCCGGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	71916266	71914303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71914617_71916109
ENSMUSG00000007987.13_136940568_136942245_1	chr5	+	745	2	ISM	ENSMUSG00000007987.13	ENSMUST00000200157.5	3071	5	3564	2013	3512	1269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGAATCAATAATGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	136940567	136942245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136940746_136941678
ENSMUSG00000007987.13_136940639_136942309_1	chr5	+	738	2	ISM	ENSMUSG00000007987.13	ENSMUST00000200157.5	3071	5	3635	1949	3583	1333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTGGAAGGAGAGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	136940638	136942309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136940746_136941678
ENSMUSG00000007987.13_136940693_136942372_1	chr5	+	747	2	ISM	ENSMUSG00000007987.13	ENSMUST00000200157.5	3071	5	3689	1886	3637	1396	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCACAACACACACACACAA	NA	NA	NA	NA	NA	NA	NA	NA	136940692	136942372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_136940746_136941678
ENSMUSG00000008035.13_10583856_10584340_1	chrX	+	203	2	FSM	ENSMUSG00000008035.13	ENSMUST00000008179.7	2019	2	227	1589	4	-1581	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATCCCGTCACACCGGC	NA	NA	NA	NA	NA	NA	NA	NA	10583855	10584340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_10583944_10584225
ENSMUSG00000008036.12_16472397_16482859_1	chr7	+	414	5	FSM	ENSMUSG00000008036.12	ENSMUST00000086112.8	836	5	62	360	28	-80	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTGGCAGGAGAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	16472396	16482859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_16472464_16477143_16477294_16481185_16481300_16482613_16482674_16482836
ENSMUSG00000008036.12_16477143_16482970_1	chr7	+	459	4	ISM	ENSMUSG00000008036.12	ENSMUST00000086112.8	836	5	4808	249	4774	31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGCCTGCTCGTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	16477142	16482970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_16477294_16481185_16481300_16482613_16482674_16482836
ENSMUSG00000008036.12_16477188_16483027_1	chr7	+	471	4	ISM	ENSMUSG00000008036.12	ENSMUST00000086112.8	836	5	4853	192	4819	88	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCTCAGCTGGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	16477187	16483027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_16477294_16481185_16481300_16482613_16482674_16482836
ENSMUSG00000008036.12_16477223_16483093_1	chr7	+	502	4	ISM	ENSMUSG00000008036.12	ENSMUST00000086112.8	836	5	4888	126	4854	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCCTCTGGGCCCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	16477222	16483093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_16477294_16481185_16481300_16482613_16482674_16482836
ENSMUSG00000008036.12_16481184_16483219_1	chr7	+	559	3	ISM	ENSMUSG00000008036.12	ENSMUST00000086112.8	836	5	8849	0	8815	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTCTGAGCCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	16481183	16483219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_16481300_16482613_16482674_16482836
ENSMUSG00000008090.15_108842134_108852822_1	chr5	+	802	5	ISM	ENSMUSG00000008090.15	ENST00000510644.6	1807	7	37	1290	0	-1290	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGACATCATGTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	108842133	108852822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108842399_108842903_108842985_108851151_108851425_108852532_108852614_108852720
ENSMUSG00000008090.15_108842368_108853113_1	chr5	+	780	6	ISM	ENSMUSG00000008090.15	ENST00000510644.6	1807	7	271	999	0	-999	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACACACCCTGTGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	108842367	108853113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108842399_108842903_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084
ENSMUSG00000008090.15_108842941_108853163_1	chr5	+	762	5	ISM	ENSMUSG00000008090.15	ENST00000510644.6	1807	7	844	949	573	-949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGCAAGGTGCGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	108842940	108853163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084
ENSMUSG00000008090.15_108851201_108853319_1	chr5	+	825	4	ISM	ENSMUSG00000008090.15	ENST00000510644.6	1807	7	9104	793	8833	-793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCTCAACAAGCTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	108851200	108853319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108851425_108852532_108852614_108852720_108853006_108853084
ENSMUSG00000008090.15_108851278_108853360_1	chr5	+	789	4	ISM	ENSMUSG00000008090.15	ENST00000510644.6	1807	7	9181	752	8910	-752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGGCATGTACATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	108851277	108853360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108851425_108852532_108852614_108852720_108853006_108853084
ENSMUSG00000008090.15_108851333_108853407_1	chr5	+	781	4	ISM	ENSMUSG00000008090.15	ENST00000510644.6	1807	7	9236	705	8965	-705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTAGCGCCTTCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	108851332	108853407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108851425_108852532_108852614_108852720_108853006_108853084
ENSMUSG00000008090.15_108851338_108854145_1	chr5	+	1271	5	ISM	ENSMUSG00000008090.15	ENST00000510644.6	1807	7	9241	-33	8970	33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCATTTGGGGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	108851337	108854145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ENSMUSG00000008090.15_108852532_108853803_1	chr5	+	843	4	ISM	ENSMUSG00000008090.15	ENST00000510644.6	1807	7	10435	309	10164	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCAGACCAAGAAGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	108852531	108853803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108852614_108852720_108853006_108853084_108853439_108853681
ENSMUSG00000008140.19_44139535_44145696_1	chr7	-	1528	8	FSM	ENSMUSG00000008140.19	ENSMUST00000118515.9	1662	8	134	0	134	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTGCCTTCTGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	44145696	44139534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44140395_44140586_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ENSMUSG00000008140.19_44140309_44141582_1	chr7	-	195	3	ISM	ENSMUSG00000008140.19	ENSMUST00000239015.2	1855	7	4355	947	4248	-774	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCCGGTGAGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	44141582	44140308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44140395_44141378_44141473_44141567
ENSMUSG00000008167.15_85786685_85793753_1	chr8	+	1903	10	NNC	ENSMUSG00000008167.15	novel	1907	10	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGAGCTTTCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	85786684	85793753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792684_85792793_85792901_85792992_85793073_85793140_85793218
ENSMUSG00000008167.15_85786726_85793753_1	chr8	+	1868	10	FSM	ENSMUSG00000008167.15	ENSMUST00000095220.4	1907	10	42	-3	42	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGAGCTTTCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	85786725	85793753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
ENSMUSG00000008167.15_85786726_85793753_2	chr8	+	1861	10	NNC	ENSMUSG00000008167.15	novel	1907	10	NA	NA	42	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGAGCTTTCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	85786725	85793753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_85787159_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
ENSMUSG00000008167.15_85786726_85793753_3	chr8	+	1861	10	NNC	ENSMUSG00000008167.15	novel	1907	10	NA	NA	42	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGAGCTTTCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	85786725	85793753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791216_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
ENSMUSG00000008193.14_44177388_44178412_1	chr7	-	446	2	ISM	ENSMUSG00000008193.14	ENST00000439922.6	505	3	942	-14	942	14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGCACTCCGCTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	44178412	44177387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44177682_44178260
ENSMUSG00000008193.14_44177595_44179329_1	chr7	-	482	4	FSM	ENSMUSG00000008193.14	ENST00000597855.5	507	4	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCCGGCGTCTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	44179329	44177594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44177682_44178260_44178377_44178802_44179033_44179280
ENSMUSG00000008226.15_73145824_73150266_1	chr2	+	915	3	ISM	ENSMUSG00000008226.15	ENSMUST00000112050.2	1897	4	2826	874	2826	-874	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGGACAACCCACGGTG	NA	NA	NA	NA	NA	NA	NA	NA	73145823	73150266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_73145937_73148589_73148772_73149646
ENSMUSG00000008226.15_73148713_73150515_1	chr2	+	928	2	ISM	ENSMUSG00000008226.15	ENSMUST00000112050.2	1897	4	5715	625	5715	-625	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTTAGTGTGCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	73148712	73150515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_73148772_73149646
ENSMUSG00000008301.12_56705999_56717388_1	chr18	+	943	4	ISM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	105	3396	105	-2873	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTTTCTGAATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	56705998	56717388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_56706208_56708533_56709121_56713251_56713373_56717362
ENSMUSG00000008301.12_56706176_56719979_1	chr18	+	855	5	FSM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	282	805	282	-282	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAAATAAAAAAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	56706175	56719979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_56706208_56708533_56709121_56713251_56713373_56717362_56717447_56719948
ENSMUSG00000008301.12_56708720_56720261_1	chr18	+	919	4	ISM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	2826	523	2826	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTACCATTTCTACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	56708719	56720261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_56709121_56713251_56713373_56717362_56717447_56719948
ENSMUSG00000008301.12_56708811_56720296_1	chr18	+	863	4	ISM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	2917	488	2917	35	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAGACTAGAGAAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	56708810	56720296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_56709121_56713251_56713373_56717362_56717447_56719948
ENSMUSG00000008301.12_56708961_56720440_1	chr18	+	857	4	ISM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	3067	344	3067	179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTAGCCTGAGTGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	56708960	56720440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_56709121_56713251_56713373_56717362_56717447_56719948
ENSMUSG00000008301.12_56713248_56720580_1	chr18	+	841	3	ISM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	7354	204	7354	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCAGCTGTTACATTCA	NA	NA	NA	NA	NA	NA	NA	NA	56713247	56720580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_56713373_56717362_56717447_56719948
ENSMUSG00000008301.12_56713344_56720784_1	chr18	+	949	3	ISM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	7450	0	7450	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTGTCTGTCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	56713343	56720784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_56713373_56717362_56717447_56719948
ENSMUSG00000008305.19_72036044_72118389_1	chr4	-	2931	19	NNC	ENSMUSG00000008305.19	novel	2967	19	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	72118389	72036043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043252_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076433_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ENSMUSG00000008305.19_72036044_72118389_2	chr4	-	2936	19	FSM	ENSMUSG00000008305.19	ENST00000376499.8	2967	19	29	2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	72118389	72036043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076433_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ENSMUSG00000008305.19_72036044_72118389_3	chr4	-	2931	19	NNC	ENSMUSG00000008305.19	novel	2967	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	72118389	72036043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060113_72063546_72063658_72076433_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ENSMUSG00000008305.19_72036044_72118389_4	chr4	-	2931	19	NNC	ENSMUSG00000008305.19	novel	2967	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	72118389	72036043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043013_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076433_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ENSMUSG00000008318.11_100496069_100497409_1	chr7	-	799	3	ISM	ENSMUSG00000008318.11	ENSMUST00000008462.11	2851	11	15244	1015	15244	-1015	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCCTCTCTTCTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	100497409	100496068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_100496485_100496602_100496802_100497225
ENSMUSG00000008333.13_142904959_142914780_1	chr2	+	2063	7	NNC	ENSMUSG00000008333.13	novel	2061	7	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCTGACAGATAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	142904958	142914780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910317_142911293_142911345_142912807_142912897_142913315
ENSMUSG00000008333.13_142904959_142914780_2	chr2	+	2057	7	NNC	ENSMUSG00000008333.13	novel	2061	7	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCTGACAGATAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	142904958	142914780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_142905019_142906472_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
ENSMUSG00000008333.13_142904959_142914780_3	chr2	+	2060	7	NNC	ENSMUSG00000008333.13	novel	2061	7	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCTGACAGATAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	142904958	142914780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_142905019_142906461_142906551_142907103_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
ENSMUSG00000008348.10_125463674_125467078_1	chr5	-	1760	2	FSM	ENSMUSG00000008348.10	ENSMUST00000156249.2	2581	2	188	633	0	-160	multi-exon	TRUE	canonical	NA	NA	NA	NA	3090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGACACCATAGAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	125467078	125463673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_125465329_125466973
ENSMUSG00000008348.10_125463735_125467127_1	chr5	-	1748	2	FSM	ENSMUSG00000008348.10	ENSMUST00000156249.2	2581	2	139	694	-49	-221	multi-exon	FALSE	canonical	NA	NA	NA	NA	2906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGATGCAGATCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	125467127	125463734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_125465329_125466973
ENSMUSG00000008348.10_125463848_125467266_1	chr5	-	1774	2	FSM	ENSMUSG00000008348.10	ENSMUST00000156249.2	2581	2	0	807	0	-334	multi-exon	FALSE	canonical	NA	NA	NA	NA	2515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGACCAGCAGAGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	125467266	125463847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_125465329_125466973
ENSMUSG00000008348.10_125463946_125464939_1	chr5	-	538	2	NNC	ENSMUSG00000008348.10	novel	2618	2	NA	NA	-526	-432	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGACCCTGACAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	125464939	125463945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_125464138_125464593
ENSMUSG00000008348.10_125464020_125465006_1	chr5	-	531	2	NNC	ENSMUSG00000008348.10	novel	2618	2	NA	NA	-593	-506	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGACTACAACATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	125465006	125464019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_125464138_125464593
ENSMUSG00000008348.10_125464076_125465069_1	chr5	-	538	2	NNC	ENSMUSG00000008348.10	novel	2618	2	NA	NA	-656	-562	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGACCAGCAGAGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	125465069	125464075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_125464138_125464593
ENSMUSG00000008348.10_125464899_125466902_1	chr5	-	572	2	FSM	ENSMUSG00000008348.10	ENSMUST00000136312.2	2618	2	176	1870	176	-1385	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGTCCTTCGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	125466902	125464898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_125465329_125466760
ENSMUSG00000008348.10_125465038_125467078_1	chr5	-	609	2	FSM	ENSMUSG00000008348.10	ENSMUST00000136312.2	2618	2	0	2009	0	-1524	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACCATAGAGAATGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	125467078	125465037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_125465329_125466760
ENSMUSG00000008373.17_3632991_3637789_1	chr7	+	698	7	ISM	ENSMUSG00000008373.17	ENSMUST00000179769.8	3125	14	7	7695	7	-6439	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCGGATGTCCTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	3632990	3637789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691
ENSMUSG00000008373.17_3636303_3641660_1	chr7	+	654	6	ISM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	3319	3825	2747	-2568	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTTGATAAGTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	3636302	3641660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629
ENSMUSG00000008373.17_3637144_3641921_1	chr7	+	697	6	ISM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	4160	3564	3588	-2307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGAGGTCAGGCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	3637143	3641921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856
ENSMUSG00000008373.17_3637827_3642815_1	chr7	+	641	7	ISM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	4843	2670	4271	-1413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTGGGAAGTCAACAATT	NA	NA	NA	NA	NA	NA	NA	NA	3637826	3642815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787
ENSMUSG00000008373.17_3639279_3643861_1	chr7	+	664	7	ISM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	6295	1624	5723	-367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGCATGGCCGAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	3639278	3643861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ENSMUSG00000008373.17_3642812_3644409_1	chr7	+	689	2	ISM	ENSMUSG00000008373.17	ENSMUST00000108636.2	1798	13	9256	-181	9256	181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCCAACAAGACCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	3642811	3644409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3642887_3643795
ENSMUSG00000008393.10_8478372_8481541_1	chr16	-	687	2	ISM	ENSMUSG00000008393.10	ENST00000610831.4	874	4	2878	-164	2878	164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGCTTCCCAGGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	8481541	8478371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_8478968_8481450
ENSMUSG00000008393.10_8478602_8490019_1	chr16	-	700	4	FSM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	0	2158	0	-66	multi-exon	TRUE	canonical	NA	NA	NA	NA	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCTCACTGTCTGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	8490019	8478601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_8478968_8481450_8481574_8482118_8482287_8489976
ENSMUSG00000008393.10_8478624_8481480_1	chr16	-	374	2	ISM	ENSMUSG00000008393.10	ENST00000610831.4	874	4	2939	88	2939	-88	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCCTCCAGCCATTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	8481480	8478623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_8478968_8481450
ENSMUSG00000008393.10_8478866_8482286_1	chr16	-	393	3	ISM	ENSMUSG00000008393.10	ENST00000610831.4	874	4	2133	330	2133	-330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCACCTGGCACCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	8482286	8478865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_8478968_8481450_8481574_8482118
ENSMUSG00000008393.10_8481469_8484375_1	chr16	-	388	3	NNC	ENSMUSG00000008393.10	novel	874	4	NA	NA	44	-2933	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGCACATCTCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	8484375	8481468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_8481574_8482118_8482287_8484260
ENSMUSG00000008398.17_93083276_93120706_1	chr10	-	3695	4	ISM	ENSMUSG00000008398.17	ENSMUST00000008542.12	4212	5	26291	0	26125	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTTGTTCCCTTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	93120706	93083275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_93085971_93090550_93090674_93100741_93101543_93120630
ENSMUSG00000008398.17_93083662_93146877_1	chr10	-	3706	5	FSM	ENSMUSG00000008398.17	ENSMUST00000008542.12	4212	5	120	386	-46	-386	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCATGACTGTAAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	93146877	93083661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_93085971_93090550_93090674_93100741_93101543_93120630_93120840_93146613
ENSMUSG00000008398.17_93083662_93146997_1	chr10	-	3826	5	FSM	ENSMUSG00000008398.17	ENSMUST00000008542.12	4212	5	0	386	0	-386	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCATGACTGTAAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	93146997	93083661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_93085971_93090550_93090674_93100741_93101543_93120630_93120840_93146613
ENSMUSG00000008429.9_25019428_25062368_1	chr9	-	2033	8	FSM	ENSMUSG00000008429.9	ENSMUST00000008573.9	2781	8	748	0	748	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAGCCTTATGGGATAT	NA	NA	NA	NA	NA	NA	NA	NA	25062368	25019427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_25020302_25020735_25020851_25021706_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
ENSMUSG00000008429.9_25019428_25062454_1	chr9	-	2119	8	FSM	ENSMUSG00000008429.9	ENSMUST00000008573.9	2781	8	662	0	662	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAGCCTTATGGGATAT	NA	NA	NA	NA	NA	NA	NA	NA	25062454	25019427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_25020302_25020735_25020851_25021706_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
ENSMUSG00000008429.9_25019584_25062513_1	chr9	-	2022	8	FSM	ENSMUSG00000008429.9	ENSMUST00000008573.9	2781	8	603	156	603	-156	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCATCAGTTGGAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	25062513	25019583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_25020302_25020735_25020851_25021706_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
ENSMUSG00000008435.16_4430178_4433416_1	chr7	-	648	2	ISM	ENSMUSG00000008435.16	ENSMUST00000008579.14	3034	7	15232	1512	15232	-1512	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTATGGGCAGTGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	4433416	4430177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4430802_4433392
ENSMUSG00000008435.16_4430321_4434488_1	chr7	-	651	3	ISM	ENSMUSG00000008435.16	ENSMUST00000008579.14	3034	7	14160	1655	14160	-1655	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTACATTGAGTTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	4434488	4430320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4430802_4433392_4433495_4434420
ENSMUSG00000008435.16_4430482_4438015_1	chr7	-	658	4	ISM	ENSMUSG00000008435.16	ENSMUST00000008579.14	3034	7	10633	1816	10633	-1816	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTACTATTAGAATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	4438015	4430481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992
ENSMUSG00000008435.16_4430632_4445666_1	chr7	-	664	5	ISM	ENSMUSG00000008435.16	ENSMUST00000008579.14	3034	7	2982	1966	2982	-1966	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGAAAGTGCCCGTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	4445666	4430631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592
ENSMUSG00000008435.16_4430762_4445748_1	chr7	-	616	5	ISM	ENSMUSG00000008435.16	ENSMUST00000008579.14	3034	7	2900	2096	2900	-2096	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCAGCCCAGCACATATC	NA	NA	NA	NA	NA	NA	NA	NA	4445748	4430761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592
ENSMUSG00000008435.16_4433392_4447320_1	chr7	-	696	5	ISM	ENSMUSG00000008435.16	ENSMUST00000008579.14	3034	7	1328	4726	1328	-4726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCCTTCCAGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	4447320	4433391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4433495_4434420_4434634_4437992_4438098_4445592_4445749_4447201
ENSMUSG00000008435.16_4434523_4448592_1	chr7	-	638	5	ISM	ENSMUSG00000008435.16	ENSMUST00000008579.14	3034	7	56	5857	56	-5857	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGAACTGGCAGATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	4448592	4434522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4434634_4437992_4438098_4445592_4445749_4447201_4447321_4448445
ENSMUSG00000008450.9_106587243_106605788_1	chr8	+	743	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	31	174	31	-174	multi-exon	FALSE	canonical	NA	NA	NA	NA	1758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGGTTTTGTTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106587242	106605788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
ENSMUSG00000008450.9_106587615_106605962_1	chr8	+	1106	5	FSM	ENSMUSG00000008450.9	ENST00000568396.2	1145	5	25	14	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAACAGTTTAAATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	106587614	106605962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_106587899_106602165_106602291_106602985_106603058_106603141_106603241_106605436
ENSMUSG00000008450.9_106587728_106605976_1	chr8	+	1007	5	FSM	ENSMUSG00000008450.9	ENST00000568396.2	1145	5	138	0	113	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTAATTAGTTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	106587727	106605976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_106587899_106602165_106602291_106602985_106603058_106603141_106603241_106605436
ENSMUSG00000008475.14_152642293_152651206_1	chr1	+	1772	4	FSM	ENSMUSG00000008475.14	ENSMUST00000077755.11	1914	4	0	142	0	-142	multi-exon	FALSE	canonical	NA	NA	NA	NA	4239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGAGGTGAGAACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	152642292	152651206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_152642619_152644611_152644685_152647114_152647292_152650010
ENSMUSG00000008475.14_152642293_152651206_2	chr1	+	1766	4	NNC	ENSMUSG00000008475.14	novel	1914	4	NA	NA	0	-142	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGAGGTGAGAACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	152642292	152651206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_152642621_152644613_152644679_152647114_152647292_152650010
ENSMUSG00000008475.14_152642493_152651348_1	chr1	+	1700	4	NNC	ENSMUSG00000008475.14	novel	1914	4	NA	NA	200	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGTAACTCTCCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	152642492	152651348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_152642607_152644613_152644685_152647114_152647292_152650010
ENSMUSG00000008475.14_152644612_152651348_1	chr1	+	1588	3	ISM	ENSMUSG00000008475.14	ENSMUST00000077755.11	1914	4	2319	0	2319	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGTAACTCTCCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	152644611	152651348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_152644685_152647114_152647292_152650010
ENSMUSG00000008489.19_91139000_91260291_1	chr4	-	3719	7	NNC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTATCTTTAAATACAT	NA	NA	NA	NA	NA	NA	NA	NA	91260291	91138999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_91141805_91142385_91142417_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ENSMUSG00000008489.19_91139000_91260291_4	chr4	-	3720	7	NNC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTATCTTTAAATACAT	NA	NA	NA	NA	NA	NA	NA	NA	91260291	91138999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_91141805_91142377_91142417_91149004_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ENSMUSG00000008489.19_91139000_91260291_5	chr4	-	3722	7	NNC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTATCTTTAAATACAT	NA	NA	NA	NA	NA	NA	NA	NA	91260291	91138999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_91141805_91142377_91142417_91148997_91149224_91152228_91152383_91169450_91169550_91196847_91197092_91260136
ENSMUSG00000008540.12_138124654_138133382_1	chr6	+	508	3	ISM	ENSMUSG00000008540.12	ENSMUST00000118091.8	1030	4	6070	228	6070	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATCTTCACCTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	138124653	138133382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_138124814_138127765_138127861_138133129
ENSMUSG00000008540.12_138127764_138133557_1	chr6	+	525	2	ISM	ENSMUSG00000008540.12	ENSMUST00000118091.8	1030	4	9180	53	9180	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAATATAATCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	138127763	138133557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_138127861_138133129
ENSMUSG00000008575.18_82214318_82245987_1	chr4	-	753	2	ISM	ENSMUSG00000008575.18	ENSMUST00000064770.9	8429	9	177558	5905	177558	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGGAAAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	82245987	82214317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_82215049_82245965
ENSMUSG00000008575.18_82214318_82246088_1	chr4	-	854	2	ISM	ENSMUSG00000008575.18	ENSMUST00000064770.9	8429	9	177457	5905	177457	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGGAAAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	82246088	82214317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_82215049_82245965
ENSMUSG00000008575.18_82214318_82301898_1	chr4	-	1752	10	ISM	ENSMUSG00000008575.18	ENSMUST00000107248.8	3294	12	122046	33	121647	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGGAAAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	82301898	82214317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_82215049_82228539_82228629_82238710_82238794_82241781_82241948_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844
ENSMUSG00000008575.18_82214489_82248561_1	chr4	-	778	3	ISM	ENSMUSG00000008575.18	ENSMUST00000064770.9	8429	9	174984	6076	174984	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGCCAGCCATTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	82248561	82214488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_82215049_82245965_82246151_82248528
ENSMUSG00000008575.18_82214554_82416663_1	chr4	-	1705	11	ISM	ENSMUSG00000008575.18	ENSMUST00000107248.8	3294	12	7281	269	6882	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATTCCTGGTTATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	82416663	82214553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_82215049_82228539_82228629_82238710_82238794_82241781_82241948_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474
ENSMUSG00000008575.18_82214616_82268670_1	chr4	-	798	4	ISM	ENSMUSG00000008575.18	ENSMUST00000064770.9	8429	9	154875	6203	154875	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAATATTTGCATGATAAG	NA	NA	NA	NA	NA	NA	NA	NA	82268670	82214615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_82215049_82245965_82246151_82248528_82248664_82268625
ENSMUSG00000008575.18_82214678_82268711_1	chr4	-	777	4	ISM	ENSMUSG00000008575.18	ENSMUST00000064770.9	8429	9	154834	6265	154834	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCGCTGGGAAATAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	82268711	82214677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_82215049_82245965_82246151_82248528_82248664_82268625
ENSMUSG00000008575.18_82214785_82268744_1	chr4	-	703	4	ISM	ENSMUSG00000008575.18	ENSMUST00000064770.9	8429	9	154801	6372	154801	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTCACTAATTCCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	82268744	82214784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_82215049_82245965_82246151_82248528_82248664_82268625
ENSMUSG00000008575.18_82214890_82301898_1	chr4	-	842	7	ISM	ENSMUSG00000008575.18	ENSMUST00000064770.9	8429	9	121647	6477	121647	-546	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAGGGGAAAAACACCC	NA	NA	NA	NA	NA	NA	NA	NA	82301898	82214889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_82215049_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844
ENSMUSG00000008575.18_82214979_82430844_1	chr4	-	1666	12	FSM	ENSMUSG00000008575.18	ENST00000646622.1	2308	12	7	635	7	-635	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATTATGGTTTGAACAT	NA	NA	NA	NA	NA	NA	NA	NA	82430844	82214978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_82215049_82228539_82228629_82238710_82238794_82241781_82241948_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82430801
ENSMUSG00000008575.18_82214999_82416523_1	chr4	-	782	8	ISM	ENSMUSG00000008575.18	ENSMUST00000064770.9	8429	9	7022	6586	7022	-655	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTTACCGGCAAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	82416523	82214998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_82215049_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474
ENSMUSG00000008575.18_82268725_82417006_1	chr4	-	796	5	ISM	ENSMUSG00000008575.18	ENSMUST00000107248.8	3294	12	6938	54440	6539	-54381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAGATGAAAATATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	82417006	82268724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474
ENSMUSG00000008575.18_82271832_82430862_1	chr4	-	765	5	ISM	ENSMUSG00000008575.18	ENST00000646622.1	2308	12	-11	57488	-11	-57488	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCAACCATACTATCATG	NA	NA	NA	NA	NA	NA	NA	NA	82430862	82271831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82430801
ENSMUSG00000008658.17_6887710_7148278_1	chr16	+	939	8	ISM	ENSMUSG00000008658.17	ENSMUST00000229741.2	1407	13	0	79399	0	-78220	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTTCACTTGTATATAC	NA	NA	NA	NA	NA	NA	NA	NA	6887709	7148278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_6887950_7042174_7042415_7094888_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225
ENSMUSG00000008658.17_6887813_7170909_1	chr16	+	978	9	ISM	ENSMUSG00000008658.17	ENSMUST00000229741.2	1407	13	103	56768	103	-55589	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCCCGGCCTATGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	6887812	7170909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_6887950_7042174_7042415_7094888_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795
ENSMUSG00000008658.17_6887870_7170909_1	chr16	+	921	9	ISM	ENSMUSG00000008658.17	ENSMUST00000229741.2	1407	13	160	56768	160	-55589	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCCCGGCCTATGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	6887869	7170909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_6887950_7042174_7042415_7094888_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795
ENSMUSG00000008658.17_6887923_7170928_1	chr16	+	887	9	ISM	ENSMUSG00000008658.17	ENSMUST00000229741.2	1407	13	213	56749	213	-55570	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTGCACCCTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	6887922	7170928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_6887950_7042174_7042415_7094888_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795
ENSMUSG00000008658.17_7035534_7228069_1	chr16	+	1769	14	FSM	ENSMUSG00000008658.17	ENST00000683326.1	4029	14	29	2231	29	208	multi-exon	TRUE	canonical	NA	NA	NA	NA	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGGGTTAAGCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	7035533	7228069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_7035694_7042174_7042415_7094888_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7209851_7209905_7225827_7225904_7227554
ENSMUSG00000008658.17_7035599_7228129_1	chr16	+	1764	14	FSM	ENSMUSG00000008658.17	ENST00000683326.1	4029	14	94	2171	94	268	multi-exon	FALSE	canonical	NA	NA	NA	NA	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATTCTGTGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	7035598	7228129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_7035694_7042174_7042415_7094888_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7209851_7209905_7225827_7225904_7227554
ENSMUSG00000008658.17_7042174_7226380_1	chr16	+	1139	12	FSM	ENSMUSG00000008658.17	ENST00000422070.8	1257	12	0	118	0	-118	multi-exon	FALSE	canonical	NA	NA	NA	NA	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTTACAATTCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	7042173	7226380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_7042415_7094888_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7225827_7225904_7226283
ENSMUSG00000008658.17_7042174_7226440_1	chr16	+	1199	12	FSM	ENSMUSG00000008658.17	ENST00000422070.8	1257	12	0	58	0	-58	multi-exon	FALSE	canonical	NA	NA	NA	NA	1585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACTTTGTGTGTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	7042173	7226440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_7042415_7094888_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7225827_7225904_7226283
ENSMUSG00000008658.17_7042174_7226498_1	chr16	+	1257	12	FSM	ENSMUSG00000008658.17	ENST00000422070.8	1257	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTGTTTTTTGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	7042173	7226498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_7042415_7094888_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7225827_7225904_7226283
ENSMUSG00000008658.17_7042174_7226498_2	chr16	+	1073	11	FSM	ENSMUSG00000008658.17	ENST00000535565.6	1073	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTGTTTTTTGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	7042173	7226498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_7042415_7103341_7103396_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7209851_7209905_7225827_7225904_7226283
ENSMUSG00000008658.17_7042174_7228297_1	chr16	+	1838	13	FSM	ENSMUSG00000008658.17	ENST00000675459.1	3870	13	0	2032	0	-125	multi-exon	FALSE	canonical	NA	NA	NA	NA	1568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTCAAGCCAAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	7042173	7228297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_7042415_7094888_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7209851_7209905_7225827_7225904_7227554
ENSMUSG00000008658.17_7094889_7226380_1	chr16	+	951	12	ISM	ENSMUSG00000008658.17	ENST00000547372.5	3168	14	52715	2042	52715	-118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTTACAATTCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	7094888	7226380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7209851_7209905_7225827_7225904_7226283
ENSMUSG00000008658.17_7094889_7227677_1	chr16	+	849	11	ISM	ENSMUSG00000008658.17	ENST00000436368.6	1582	13	207293	139	52715	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGATAAAACCATTAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	7094888	7227677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7187664_7187708_7193768_7193834_7225827_7225904_7227632
ENSMUSG00000008658.17_7094920_7228507_1	chr16	+	1776	12	ISM	ENSMUSG00000008658.17	ENST00000675459.1	3870	13	52746	1822	52746	85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATATCACTGCTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	7094919	7228507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7209851_7209905_7225827_7225904_7227554
ENSMUSG00000008658.17_7103342_7227861_1	chr16	+	889	10	ISM	ENSMUSG00000008658.17	ENST00000436368.6	1582	13	215746	-45	61168	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATTTTTTATCTTATAC	NA	NA	NA	NA	NA	NA	NA	NA	7103341	7227861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7187664_7187708_7193768_7193834_7225827_7225904_7227632
ENSMUSG00000008658.17_7110056_7228702_1	chr16	+	1797	10	ISM	ENSMUSG00000008658.17	ENST00000675459.1	3870	13	67882	1627	67882	280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCTTTAGTTTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	7110055	7228702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7209851_7209905_7225827_7225904_7227554
ENSMUSG00000008658.17_7110092_7226638_1	chr16	+	902	11	ISM	ENSMUSG00000008658.17	ENST00000547372.5	3168	14	67918	1784	67918	140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGGGAGGCAAGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	7110091	7226638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7209851_7209905_7225827_7225904_7226283_7226517_7226582
ENSMUSG00000008658.17_7124281_7228008_1	chr16	+	816	7	ISM	ENSMUSG00000008658.17	ENST00000676218.1	3704	12	82108	2285	82107	147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGGCCATATCCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	7124280	7228008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7225827_7225904_7227632
ENSMUSG00000008658.17_7170834_7226932_1	chr16	+	912	7	ISM	ENSMUSG00000008658.17	ENST00000547372.5	3168	14	128660	1490	128660	434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAAGAGCCTGCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	7170833	7226932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_7170929_7181728_7181769_7193768_7193834_7209851_7209905_7225827_7225904_7226283_7226517_7226582
ENSMUSG00000008658.17_7170834_7227007_1	chr16	+	987	7	ISM	ENSMUSG00000008658.17	ENST00000547372.5	3168	14	128660	1415	128660	509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGTCAGTTGCCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	7170833	7227007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_7170929_7181728_7181769_7193768_7193834_7209851_7209905_7225827_7225904_7226283_7226517_7226582
ENSMUSG00000008658.17_7170834_7228200_1	chr16	+	844	5	ISM	ENSMUSG00000008658.17	ENST00000676218.1	3704	12	128661	2093	128660	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAC	NA	NA	NA	NA	NA	NA	NA	NA	7170833	7228200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_7170929_7181728_7181769_7193768_7193834_7225827_7225904_7227632
ENSMUSG00000008658.17_7170834_7228242_1	chr16	+	886	5	ISM	ENSMUSG00000008658.17	ENST00000676218.1	3704	12	128661	2051	128660	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAATGACCCACTGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	7170833	7228242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_7170929_7181728_7181769_7193768_7193834_7225827_7225904_7227632
ENSMUSG00000008658.17_7170834_7228990_1	chr16	+	1765	6	ISM	ENSMUSG00000008658.17	ENST00000675459.1	3870	13	128660	1339	128660	-400	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCAGAAGGAAGCAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	7170833	7228990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_7170929_7181728_7181769_7193768_7193834_7209851_7209905_7225827_7225904_7227554
ENSMUSG00000008658.17_7170834_7229038_1	chr16	+	1813	6	ISM	ENSMUSG00000008658.17	ENST00000675459.1	3870	13	128660	1291	128660	-352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCCACCCCCAAAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	7170833	7229038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_7170929_7181728_7181769_7193768_7193834_7209851_7209905_7225827_7225904_7227554
ENSMUSG00000008668.16_34171195_34174651_1	chr17	-	440	4	ISM	ENSMUSG00000008668.16	ENSMUST00000008812.9	560	5	0	222	0	-222	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGGTGATGAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	34174651	34171194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34171287_34171376_34171566_34174051_34174151_34174591
ENSMUSG00000008682.14_73314418_73316741_1	chrX	+	795	7	NNC	ENSMUSG00000008682.14	novel	799	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7993	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	73314417	73316741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_73314485_73314584_73314631_73315265_73315325_73315405_73315514_73315792_73315924_73316277_73316441_73316520
ENSMUSG00000008682.14_73314418_73316741_2	chrX	+	795	7	NNC	ENSMUSG00000008682.14	novel	799	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	73314417	73316741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_73314485_73314584_73314631_73315265_73315325_73315413_73315514_73315784_73315924_73316277_73316441_73316520
ENSMUSG00000008682.14_73314418_73316741_3	chrX	+	796	7	NNC	ENSMUSG00000008682.14	novel	799	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10866	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	73314417	73316741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_73314485_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316284_73316441_73316520
ENSMUSG00000008682.14_73314418_73316741_4	chrX	+	796	7	NNC	ENSMUSG00000008682.14	novel	799	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	73314417	73316741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_73314485_73314584_73314631_73315265_73315318_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ENSMUSG00000008683.17_117714008_117715411_1	chr7	-	271	3	ISM	ENSMUSG00000008683.17	ENSMUST00000131374.8	5179	5	0	10413	0	-5721	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACATCTTGCTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	117715411	117714007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_117714088_117714331_117714470_117715358
ENSMUSG00000008690.16_89239922_89248899_1	chr15	+	856	8	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	-17	8130	0	-8130	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAAGAGAGTACCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	89239921	89248899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815
ENSMUSG00000008690.16_89240117_89253634_1	chr15	+	807	10	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	178	3395	178	-3395	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGAGCCTGCCTCCCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	89240116	89253634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586
ENSMUSG00000008690.16_89244557_89253890_1	chr15	+	875	10	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	4618	3139	4618	-3139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATTGGTGACACCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	89244556	89253890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818
ENSMUSG00000008690.16_89247632_89254118_1	chr15	+	876	10	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	7693	2911	7693	-2911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGAGTATATGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	89247631	89254118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010
ENSMUSG00000008690.16_89247806_89254281_1	chr15	+	874	10	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	7867	2748	7867	-2748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCTAGGGTCCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	89247805	89254281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227
ENSMUSG00000008690.16_89247967_89254511_1	chr15	+	860	10	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	8028	2518	8028	-2518	internal_fragment	TRUE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGTACCCACAGGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	89247966	89254511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440
ENSMUSG00000008690.16_89248125_89254691_1	chr15	+	883	10	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	8186	2338	8186	-2338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTGCCTTTAGATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	89248124	89254691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597
ENSMUSG00000008690.16_89248289_89254878_1	chr15	+	877	10	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	8350	2151	8350	-2151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTCTGGATGGGGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	89248288	89254878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806
ENSMUSG00000008690.16_89248409_89255006_1	chr15	+	808	11	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	8470	2023	8470	-2023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTAGGCCTGGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	89248408	89255006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955
ENSMUSG00000008690.16_89248814_89255196_1	chr15	+	880	11	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	8875	1833	8875	-1833	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCGTGCTATTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	89248813	89255196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094
ENSMUSG00000008690.16_89249435_89255197_1	chr15	+	792	10	NNC	ENSMUSG00000008690.16	novel	3223	20	NA	NA	9496	-1832	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCGTGCTATTGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	89249434	89255197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254507_89254597_89254692_89254806_89254879_89254955_89255012_89255094
ENSMUSG00000008690.16_89249464_89255887_1	chr15	+	1291	12	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	9525	1142	9525	-1142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAAGACACTGTGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	89249463	89255887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUSG00000008690.16_89249476_89255392_1	chr15	+	851	11	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	9537	1637	9537	-1637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCAGCCTGCTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	89249475	89255392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296
ENSMUSG00000008690.16_89254081_89255727_2	chr15	+	851	9	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	14142	1302	14142	-1302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCACTCCAGTGCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	89254080	89255727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUSG00000008690.16_89254612_89255868_1	chr15	+	815	6	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	14673	1161	14673	-1161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAATAGGTATAGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	89254611	89255868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUSG00000008690.16_89254670_89255913_1	chr15	+	802	6	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	14731	1116	14731	-1116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCGACGTATACTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	89254669	89255913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUSG00000008690.16_89255164_89256161_1	chr15	+	831	3	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	15225	868	15225	-868	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGTCATCTCGTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	89255163	89256161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89255197_89255296_89255447_89255513
ENSMUSG00000008690.16_89255339_89256192_1	chr15	+	787	2	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	15400	837	15400	-837	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGACAGGCTGCACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	89255338	89256192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89255447_89255513
ENSMUSG00000008730.18_103650976_103656759_1	chr3	-	1315	4	ISM	ENSMUSG00000008730.18	ENSMUST00000106845.9	3967	15	41632	98	41632	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGTTCTGAAGTTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	103656759	103650975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594
ENSMUSG00000008730.18_103654258_103668894_1	chr3	-	1366	9	ISM	ENSMUSG00000008730.18	ENSMUST00000029438.15	4185	16	29678	3282	29497	-3282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGAGTGCTCTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	103668894	103654257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802
ENSMUSG00000008822.16_85319183_85326821_1	chr12	-	527	2	FSM	ENSMUSG00000008822.16	ENST00000357971.7	567	2	36	4	36	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATGCTTACATTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	85326821	85319182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_85319640_85326751
ENSMUSG00000008822.16_85319321_85326845_1	chr12	-	362	2	FSM	ENSMUSG00000008822.16	ENSMUST00000117138.3	735	2	235	138	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGAACTATTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	85326845	85319320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_85319602_85326764
ENSMUSG00000008822.16_85319434_85327111_1	chr12	-	288	3	FSM	ENSMUSG00000008822.16	ENSMUST00000008966.13	648	3	98	262	-31	-113	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATCGCAAACTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	85327111	85319433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_85319602_85326764_85326857_85327083
ENSMUSG00000008845.10_124283992_124306056_1	chr6	+	3265	13	NNC	ENSMUSG00000008845.10	novel	4443	17	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2174	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAGAATTTATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	124283991	124306056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_124284281_124285902_124286227_124288345_124288667_124289379_124289701_124294260_124294576_124294669_124294985_124295612_124295709_124295800_124296116_124297313_124297638_124302219_124302532_124303459_124303568_124304857_124304947_124305920
ENSMUSG00000008845.10_124283992_124306056_2	chr6	+	3264	13	NNC	ENSMUSG00000008845.10	novel	3291	13	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2368	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAGAATTTATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	124283991	124306056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_124284281_124285902_124286227_124288345_124288667_124289385_124289701_124294260_124294576_124294669_124294985_124295612_124295709_124295800_124296116_124297313_124297638_124302219_124302536_124303459_124303568_124304856_124304947_124305920
ENSMUSG00000008845.10_124283992_124306056_3	chr6	+	3266	13	NIC	ENSMUSG00000008845.10	novel	4443	17	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2828	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAGAATTTATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	124283991	124306056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_124284281_124285902_124286227_124288345_124288667_124289379_124289701_124294260_124294576_124294669_124294985_124295612_124295709_124295800_124296116_124297313_124297638_124302219_124302532_124303459_124303568_124304856_124304947_124305920
ENSMUSG00000008845.10_124283992_124306056_4	chr6	+	3264	13	NNC	ENSMUSG00000008845.10	novel	3291	13	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2432	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAGAATTTATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	124283991	124306056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_124284281_124285902_124286227_124288345_124288667_124289379_124289701_124294260_124294576_124294669_124294985_124295612_124295709_124295800_124296116_124297313_124297632_124302219_124302536_124303459_124303568_124304856_124304947_124305920
ENSMUSG00000008845.10_124284056_124306056_1	chr6	+	3200	13	NNC	ENSMUSG00000008845.10	novel	3291	13	NA	NA	85	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1490	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAGAATTTATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	124284055	124306056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_124284281_124285902_124286227_124288345_124288661_124289379_124289701_124294260_124294576_124294669_124294985_124295612_124295709_124295800_124296116_124297313_124297638_124302219_124302536_124303459_124303568_124304856_124304947_124305920
ENSMUSG00000008845.10_124284056_124306056_2	chr6	+	3197	13	NNC	ENSMUSG00000008845.10	novel	3291	13	NA	NA	85	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1025	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAGAATTTATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	124284055	124306056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_124284281_124285902_124286227_124288345_124288667_124289379_124289701_124294260_124294576_124294678_124294985_124295612_124295709_124295800_124296116_124297313_124297638_124302219_124302536_124303459_124303568_124304856_124304947_124305920
ENSMUSG00000008845.10_124284056_124306056_3	chr6	+	3199	13	NNC	ENSMUSG00000008845.10	novel	3291	13	NA	NA	85	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1377	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAGAATTTATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	124284055	124306056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_124284281_124285902_124286227_124288345_124288667_124289379_124289701_124294267_124294576_124294669_124294985_124295612_124295709_124295800_124296116_124297313_124297638_124302219_124302536_124303459_124303568_124304856_124304947_124305920
ENSMUSG00000008845.10_124284056_124306056_4	chr6	+	3202	13	NIC	ENSMUSG00000008845.10	novel	4443	17	NA	NA	85	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAGAATTTATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	124284055	124306056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_124284281_124285902_124286227_124288345_124288667_124289379_124289701_124294260_124294576_124294669_124294985_124295612_124295709_124295800_124296116_124297313_124297638_124302219_124302532_124303459_124303568_124304856_124304947_124305920
ENSMUSG00000008855.18_102086573_102096746_1	chr11	-	2817	21	ISM	ENSMUSG00000008855.18	ENSMUST00000008999.12	4269	29	24204	3	24204	-3	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	102096746	102086572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102086695_102086773_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615
ENSMUSG00000008855.18_102086885_102097532_1	chr11	-	2776	22	ISM	ENSMUSG00000008855.18	ENSMUST00000008999.12	4269	29	23418	315	23418	-308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCAGACAGGTGAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	102097532	102086884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455
ENSMUSG00000008855.18_102087365_102097841_1	chr11	-	2809	21	ISM	ENSMUSG00000008855.18	ENSMUST00000008999.12	4269	29	23109	795	23109	-788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGGGACAGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	102097841	102087364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732
ENSMUSG00000008855.18_102088536_102115679_1	chr11	-	2760	20	ISM	ENSMUSG00000008855.18	ENSMUST00000107152.9	3788	27	5313	1959	5271	-1959	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACAACGGGAACTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	102115679	102088535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109317_102115559
ENSMUSG00000008855.18_102088585_102115731_1	chr11	-	2763	20	ISM	ENSMUSG00000008855.18	ENSMUST00000107152.9	3788	27	5261	2008	5219	-2008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCATTCTACAACGATCC	NA	NA	NA	NA	NA	NA	NA	NA	102115731	102088584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109317_102115559
ENSMUSG00000008855.18_102089790_102120950_1	chr11	-	2859	19	ISM	ENSMUSG00000008855.18	ENSMUST00000107152.9	3788	27	42	3213	0	-3213	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTTTCACTTGAAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	102120950	102089789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109317_102115559_102115782_102120830
ENSMUSG00000008859.9_18056914_18063167_1	chr13	-	249	2	ISM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	55657	1758	55657	-1758	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATAAGCATTGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	18063167	18056913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_18057087_18063091
ENSMUSG00000008859.9_18056964_18063221_1	chr13	-	253	2	ISM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	55603	1808	55603	-1808	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCCCAAACTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	18063221	18056963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_18057087_18063091
ENSMUSG00000008859.9_18057053_18067748_1	chr13	-	251	3	ISM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	51076	1897	51076	-1897	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGATGGAAGACAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	18067748	18057052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_18057087_18063091_18063267_18067706
ENSMUSG00000008859.9_18063178_18067870_1	chr13	-	253	2	ISM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	50954	8022	50954	-8022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGTAGAAGAGGCAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	18067870	18063177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_18063267_18067706
ENSMUSG00000008892.13_23067102_23083774_2	chr8	-	1349	9	NNC	ENSMUSG00000008892.13	novel	1354	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCATCTGACTTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	23083774	23067101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078746_23078811_23083699
ENSMUSG00000008892.13_23067102_23083774_3	chr8	-	1346	9	NNC	ENSMUSG00000008892.13	novel	1354	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1990	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCATCTGACTTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	23083774	23067101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077576_23077619_23078741_23078811_23083699
ENSMUSG00000008892.13_23067102_23083774_4	chr8	-	1344	9	NNC	ENSMUSG00000008892.13	novel	1354	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCATCTGACTTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	23083774	23067101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072142_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ENSMUSG00000008892.13_23067102_23083774_5	chr8	-	1347	9	NNC	ENSMUSG00000008892.13	novel	1354	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCATCTGACTTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	23083774	23067101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_23067619_23068058_23068110_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ENSMUSG00000008932.11_107825839_107861489_1	chr4	+	215	4	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	87	8173	87	-8173	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGTCTCCCAGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	107825838	107861489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107825908_107834800_107834881_107859373_107859417_107861466
ENSMUSG00000008932.11_107834824_107861566_1	chr4	+	200	3	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	9072	8096	9072	-8096	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGTGCAGAACTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	107834823	107861566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107834881_107859373_107859417_107861466
ENSMUSG00000008932.11_107861635_107865396_1	chr4	+	211	3	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	35883	4266	35883	-4266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGGCAGTGGGGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	107861634	107865396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107861687_107864686_107864787_107865337
ENSMUSG00000008932.11_107865428_107866924_1	chr4	+	193	2	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	39676	2738	39676	-2738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGACCGCCGCATCGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	107865427	107866924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107865572_107866875
ENSMUSG00000008932.11_107865480_107866973_1	chr4	+	190	2	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	39728	2689	39728	-2689	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGATGGCACCGCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	107865479	107866973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107865572_107866875
ENSMUSG00000008932.11_107865515_107867040_1	chr4	+	222	2	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	39763	2622	39763	-2622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGACTTTGGACAGATCA	NA	NA	NA	NA	NA	NA	NA	NA	107865514	107867040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107865572_107866875
ENSMUSG00000008932.11_107866919_107867615_1	chr4	+	201	2	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	41167	2047	41167	-2047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCGTCACCATGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	107866918	107867615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107867071_107867566
ENSMUSG00000008932.11_107866968_107867668_1	chr4	+	205	2	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	41216	1994	41216	-1994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAACCTCATCATAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	107866967	107867668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107867071_107867566
ENSMUSG00000008932.11_107867044_107868153_1	chr4	+	226	3	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	41292	1509	41292	-1509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCCGGAAGGATTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	107867043	107868153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107867071_107867566_107867702_107868089
ENSMUSG00000008932.11_107867645_107869449_1	chr4	+	200	3	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	41893	213	41893	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGTGACACTGCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	107867644	107869449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107867702_107868089_107868193_107869409
ENSMUSG00000008932.11_107868121_107869539_1	chr4	+	202	2	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	42369	123	42369	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCCCCCACCACATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	107868120	107869539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107868193_107869409
ENSMUSG00000008932.11_107868171_107869591_1	chr4	+	204	2	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	42419	71	42419	-71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGCCTAGACCACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	107868170	107869591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107868193_107869409
ENSMUSG00000008958.15_95018384_95029805_1	chr3	+	848	6	FSM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	51	557	51	-557	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAACGTTTGAAGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	95018383	95029805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95018526_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
ENSMUSG00000008958.15_95018384_95029805_2	chr3	+	837	6	NNC	ENSMUSG00000008958.15	novel	1456	6	NA	NA	51	-557	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAACGTTTGAAGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	95018383	95029805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_95018515_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
ENSMUSG00000008958.15_95025571_95030032_1	chr3	+	898	5	ISM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	7238	330	7238	-330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACTACCTGGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	95025570	95030032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
ENSMUSG00000008958.15_95028572_95030395_1	chr3	+	852	2	ISM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	10239	-33	10239	33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAAGTTCTTGCTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	95028571	95030395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95028718_95029689
ENSMUSG00000008976.17_84632314_84657489_1	chr16	+	1507	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	302	3178	302	-714	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACCTAGGACCTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	84632313	84657489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ENSMUSG00000008999.8_172711918_172782114_1	chr2	-	1359	6	FSM	ENSMUSG00000008999.8	ENST00000395864.7	1326	6	-33	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGACCTTTGCGGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	172782114	172711917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_172712080_172714664_172714776_172717007_172717085_172735240_172735390_172758259_172758453_172781447
ENSMUSG00000009013.6_115436490_115438938_1	chr5	-	589	3	FSM	ENSMUSG00000009013.6	ENSMUST00000009157.4	2030	3	120	1321	33	74	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGTATGTCTCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	115438938	115436489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_115436893_115438571_115438710_115438890
ENSMUSG00000009030.15_37241801_37245727_1	chr2	-	674	2	ISM	ENSMUSG00000009030.15	ENSMUST00000112940.8	3056	4	3538	1201	3538	-1201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACACATGTCTGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	37245727	37241800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_37242395_37245647
ENSMUSG00000009030.15_37241924_37247246_1	chr2	-	684	3	ISM	ENSMUSG00000009030.15	ENSMUST00000112940.8	3056	4	2019	1324	2019	-1324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGGAAGTCTTGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	37247246	37241923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_37242395_37245647_37245830_37247215
ENSMUSG00000009030.15_37241984_37247299_1	chr2	-	677	3	ISM	ENSMUSG00000009030.15	ENSMUST00000112940.8	3056	4	1966	1384	1966	-1384	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAAGATTTCTTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	37247299	37241983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_37242395_37245647_37245830_37247215
ENSMUSG00000009035.16_79245285_79249614_1	chr15	-	1931	2	ISM	ENSMUSG00000009035.16	ENSMUST00000178522.3	3314	9	37505	400	37505	-381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCACTTGCCCTGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	79249614	79245284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79247086_79249484
ENSMUSG00000009035.16_79245434_79250057_1	chr15	-	1918	3	ISM	ENSMUSG00000009035.16	ENSMUST00000178522.3	3314	9	37062	549	37062	-530	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAGCCACCCAGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	79250057	79245433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79247086_79249484_79249680_79249986
ENSMUSG00000009035.16_79245488_79250127_1	chr15	-	1934	3	ISM	ENSMUSG00000009035.16	ENSMUST00000178522.3	3314	9	36992	603	36992	-584	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACACGGCCCAGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	79250127	79245487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79247086_79249484_79249680_79249986
ENSMUSG00000009035.16_79245604_79250850_1	chr15	-	1911	4	ISM	ENSMUSG00000009035.16	ENSMUST00000178522.3	3314	9	36269	719	36269	-700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGATGCTCTCCCCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	79250850	79245603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786
ENSMUSG00000009035.16_79245713_79254193_1	chr15	-	2002	6	ISM	ENSMUSG00000009035.16	ENSMUST00000178522.3	3314	9	32926	828	32926	-809	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTAGGGTGGCAGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	79254193	79245712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097
ENSMUSG00000009035.16_79245901_79261412_1	chr15	-	1975	7	ISM	ENSMUSG00000009035.16	ENSMUST00000178522.3	3314	9	25707	1016	25707	-997	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTTCTGTGCCTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	79261412	79245900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246
ENSMUSG00000009035.16_79246077_79262766_1	chr15	-	1902	8	ISM	ENSMUSG00000009035.16	ENSMUST00000178522.3	3314	9	24353	1192	24353	-1173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTTATCCCTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	79262766	79246076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663
ENSMUSG00000009035.16_79246117_79262829_1	chr15	-	1925	8	ISM	ENSMUSG00000009035.16	ENSMUST00000178522.3	3314	9	24290	1232	24290	-1213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTCAATGGAGCAAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	79262829	79246116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663
ENSMUSG00000009035.16_79246181_79262881_1	chr15	-	1913	8	ISM	ENSMUSG00000009035.16	ENSMUST00000178522.3	3314	9	24238	1296	24238	-1277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCAGAGCCCCCACACTC	NA	NA	NA	NA	NA	NA	NA	NA	79262881	79246180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663
ENSMUSG00000009035.16_79246330_79287498_1	chr15	-	1910	9	FSM	ENSMUSG00000009035.16	ENSMUST00000074991.10	3627	9	271	1446	-42	-1426	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTAGGAAGGATGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	79287498	79246329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ENSMUSG00000009035.16_79246379_79287561_1	chr15	-	1924	9	FSM	ENSMUSG00000009035.16	ENSMUST00000074991.10	3627	9	208	1495	-105	-1475	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGCATGCTGCAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	79287561	79246378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ENSMUSG00000009035.16_79246438_79287617_1	chr15	-	1921	9	FSM	ENSMUSG00000009035.16	ENSMUST00000074991.10	3627	9	152	1554	152	-1534	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCAGGTAGAGACGTG	NA	NA	NA	NA	NA	NA	NA	NA	79287617	79246437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ENSMUSG00000009073.17_4718214_4768633_1	chr11	-	1604	15	NNC	ENSMUSG00000009073.17	novel	1719	16	NA	NA	30352	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1041	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCACCTCCTGCCACATC	NA	NA	NA	NA	NA	NA	NA	NA	4768633	4718213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737543_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504
ENSMUSG00000009073.17_4718214_4768633_2	chr11	-	1603	15	NNC	ENSMUSG00000009073.17	novel	1719	16	NA	NA	30352	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCACCTCCTGCCACATC	NA	NA	NA	NA	NA	NA	NA	NA	4768633	4718213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741206_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504
ENSMUSG00000009073.17_4718214_4768633_3	chr11	-	1604	15	NNC	ENSMUSG00000009073.17	novel	1719	16	NA	NA	30352	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCACCTCCTGCCACATC	NA	NA	NA	NA	NA	NA	NA	NA	4768633	4718213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_4718274_4730577_4730616_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504
ENSMUSG00000009073.17_4718214_4768633_4	chr11	-	1605	15	NNC	ENSMUSG00000009073.17	novel	1719	16	NA	NA	30352	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCACCTCCTGCCACATC	NA	NA	NA	NA	NA	NA	NA	NA	4768633	4718213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766160_4768504
ENSMUSG00000009073.17_4718214_4798985_1	chr11	-	1719	16	FSM	ENSMUSG00000009073.17	ENST00000361676.8	1719	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCACCTCCTGCCACATC	NA	NA	NA	NA	NA	NA	NA	NA	4798985	4718213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4798871
ENSMUSG00000009073.17_4730578_4799365_1	chr11	-	2078	16	FSM	ENSMUSG00000009073.17	ENST00000403435.5	2109	16	31	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTTATTCCCAGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	4799365	4730577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741127_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ENSMUSG00000009073.17_4737444_4798985_1	chr11	-	1197	11	ISM	ENSMUSG00000009073.17	ENST00000334961.11	1751	14	215	6866	0	-6866	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCTGGCCTCAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	4798985	4737443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4798871
ENSMUSG00000009073.17_4739818_4799126_1	chr11	-	1079	10	ISM	ENSMUSG00000009073.17	ENST00000334961.11	1751	14	74	9240	74	-9240	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTGGCACAAAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	4799126	4739817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4798871
ENSMUSG00000009073.17_4744480_4770440_1	chr11	-	641	8	ISM	ENSMUSG00000009073.17	ENST00000361452.8	2122	16	28918	26293	28545	-13902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGCTGACTCTTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	4770440	4744479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4770367
ENSMUSG00000009073.17_4744902_4798985_1	chr11	-	703	8	ISM	ENSMUSG00000009073.17	ENST00000361452.8	2122	16	373	26715	0	-14324	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATAAGAAAATTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	4798985	4744901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4770367_4770494_4798871
ENSMUSG00000009073.17_4753678_4799125_1	chr11	-	692	6	ISM	ENSMUSG00000009073.17	ENST00000361452.8	2122	16	233	35491	75	-23100	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTTGACTCCTTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	4799125	4753677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4770367_4770494_4798871
ENSMUSG00000009073.17_4766082_4799365_1	chr11	-	704	3	ISM	ENSMUSG00000009073.17	ENST00000361452.8	2122	16	-7	47895	0	-35504	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGGTGCAAAGAAAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	4799365	4766081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_4766166_4770367_4770494_4798871
ENSMUSG00000009079.17_5019689_5032067_1	chr11	-	1445	10	ISM	ENSMUSG00000009079.17	ENST00000332050.10	2359	17	17079	-4	11666	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTCCTCCTCTGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	5032067	5019688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5031991
ENSMUSG00000009079.17_5019689_5049074_2	chr11	-	2396	17	FSM	ENSMUSG00000009079.17	ENSMUST00000079949.13	2588	17	192	0	-7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTCCTCCTCTGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	5049074	5019688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ENSMUSG00000009079.17_5019689_5049074_3	chr11	-	2183	15	FSM	ENSMUSG00000009079.17	ENST00000629659.2	2251	15	72	-4	-7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTCCTCCTCTGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	5049074	5019688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041986_5043680_5043733_5043868_5043906_5049008
ENSMUSG00000009079.17_5019698_5049130_1	chr11	-	2230	15	FSM	ENSMUSG00000009079.17	ENST00000629659.2	2251	15	16	5	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTCATCCTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	5049130	5019697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041986_5043680_5043733_5043868_5043906_5049008
ENSMUSG00000009079.17_5019698_5049130_2	chr11	-	2229	15	NNC	ENSMUSG00000009079.17	novel	2251	15	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	4729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTCATCCTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	5049130	5019697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041986_5043680_5043733_5043869_5043906_5049008
ENSMUSG00000009079.17_5019974_5035923_1	chr11	-	1400	12	ISM	ENSMUSG00000009079.17	ENST00000332050.10	2359	17	13223	281	7810	-77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTATGATTATTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	5035923	5019973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5031991_5032068_5033359_5033572_5035895
ENSMUSG00000009079.17_5019974_5036036_1	chr11	-	1513	12	ISM	ENSMUSG00000009079.17	ENST00000332050.10	2359	17	13110	281	7697	-77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTATGATTATTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	5036036	5019973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5031991_5032068_5033359_5033572_5035895
ENSMUSG00000009079.17_5020084_5036036_1	chr11	-	1403	12	ISM	ENSMUSG00000009079.17	ENST00000332050.10	2359	17	13110	391	7697	144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGACCGGCCCTACTAG	NA	NA	NA	NA	NA	NA	NA	NA	5036036	5020083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5031991_5032068_5033359_5033572_5035895
ENSMUSG00000009079.17_5020290_5038026_1	chr11	-	1415	12	ISM	ENSMUSG00000009079.17	ENST00000332050.10	2359	17	11120	597	5707	-62	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTAATGGAACAGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	5038026	5020289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5031991_5032068_5033359_5033572_5035895_5036064_5037959
ENSMUSG00000009079.17_5020350_5038068_1	chr11	-	1397	12	ISM	ENSMUSG00000009079.17	ENST00000332050.10	2359	17	11078	657	5665	-122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGGACCGAGGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	5038068	5020349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5031991_5032068_5033359_5033572_5035895_5036064_5037959
ENSMUSG00000009079.17_5020398_5038122_1	chr11	-	1403	12	ISM	ENSMUSG00000009079.17	ENST00000332050.10	2359	17	11024	705	5611	-170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAGGTGGCAGAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	5038122	5020397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5031991_5032068_5033359_5033572_5035895_5036064_5037959
ENSMUSG00000009079.17_5020690_5041985_1	chr11	-	1407	12	ISM	ENSMUSG00000009079.17	ENST00000332050.10	2359	17	7161	997	1748	-462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCAACCAGTGTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	5041985	5020689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5031991_5032068_5033359_5033572_5035895_5036064_5037959_5038147_5041858
ENSMUSG00000009079.17_5020995_5043906_1	chr11	-	1461	13	ISM	ENSMUSG00000009079.17	ENST00000332050.10	2359	17	5240	1302	0	-767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTACTTCTCCCAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	5043906	5020994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5031991_5032068_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868
ENSMUSG00000009079.17_5021107_5049074_1	chr11	-	1414	14	ISM	ENSMUSG00000009079.17	ENST00000332050.10	2359	17	72	1414	-7	-879	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGGAGACAGAGGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	5049074	5021106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5031991_5032068_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ENSMUSG00000009079.17_5033432_5038067_1	chr11	-	392	3	ISM	ENSMUSG00000009079.17	ENST00000550416.1	666	5	5666	18	5666	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCAGACTGGATCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	5038067	5033431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5033548_5035895_5036064_5037959
ENSMUSG00000009090.18_4936824_4973185_1	chr11	+	1281	8	ISM	ENSMUSG00000009090.18	ENSMUST00000009234.16	4085	21	0	19606	0	-18643	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCCTGGCCTCCCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	4936823	4973185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096
ENSMUSG00000009090.18_4959530_4975709_1	chr11	+	1297	9	ISM	ENSMUSG00000009090.18	ENST00000317368.11	2831	20	-3	16119	0	-16119	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGCCCACTCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4959529	4975709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593
ENSMUSG00000009090.18_4962954_4981659_1	chr11	+	1457	11	ISM	ENSMUSG00000009090.18	ENST00000317368.11	2831	20	3421	10169	3421	-10169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTACATCTACTGGCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	4962953	4981659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629
ENSMUSG00000009090.18_4965643_4981727_1	chr11	+	1454	10	ISM	ENSMUSG00000009090.18	ENST00000317368.11	2831	20	6110	10101	6110	-10101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCTCATCTCAGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	4965642	4981727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629
ENSMUSG00000009090.18_4966702_4982452_1	chr11	+	1456	10	ISM	ENSMUSG00000009090.18	ENST00000317368.11	2831	20	7169	9376	7169	-9376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGCACCTGCTGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	4966701	4982452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417
ENSMUSG00000009090.18_4966753_4982506_1	chr11	+	1459	10	ISM	ENSMUSG00000009090.18	ENST00000317368.11	2831	20	7220	9322	7220	-9322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTGACCTCCTCAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	4966752	4982506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417
ENSMUSG00000009090.18_4966805_4982559_1	chr11	+	1460	10	ISM	ENSMUSG00000009090.18	ENST00000317368.11	2831	20	7272	9269	7272	-9269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCTCCTCCGTGCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	4966804	4982559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417
ENSMUSG00000009090.18_4968114_4983842_1	chr11	+	1531	10	ISM	ENSMUSG00000009090.18	ENST00000317368.11	2831	20	8581	7986	8581	-7986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCCTTCACGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	4968113	4983842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686
ENSMUSG00000009090.18_4969279_4987777_1	chr11	+	1526	10	ISM	ENSMUSG00000009090.18	ENST00000317368.11	2831	20	9746	4051	9746	-4051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCCTGGCCAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	4969278	4987777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987691
ENSMUSG00000009090.18_4969383_4989152_1	chr11	+	1450	11	ISM	ENSMUSG00000009090.18	ENST00000317368.11	2831	20	9850	2676	9850	-2676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGCACGTACCACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	4969382	4989152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987691_4987778_4989124
ENSMUSG00000009090.18_4969433_4989205_1	chr11	+	1453	11	ISM	ENSMUSG00000009090.18	ENST00000317368.11	2831	20	9900	2623	9900	-2623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACAGTGGGCTCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	4969432	4989205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987691_4987778_4989124
ENSMUSG00000009090.18_4969483_4989257_1	chr11	+	1455	11	ISM	ENSMUSG00000009090.18	ENST00000317368.11	2831	20	9950	2571	9950	-2571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCCCACAGGGCCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	4969482	4989257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987691_4987778_4989124
ENSMUSG00000009090.18_4973173_4990138_1	chr11	+	1486	12	ISM	ENSMUSG00000009090.18	ENST00000317368.11	2831	20	13640	1690	13640	-1690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAGCCCAGTTCCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	4973172	4990138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987691_4987778_4989124_4989255_4989518_4989604_4990093
ENSMUSG00000009090.18_4975592_4990421_1	chr11	+	1544	11	ISM	ENSMUSG00000009090.18	ENST00000317368.11	2831	20	16059	1407	16059	-1407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGCCCCTGTACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	4975591	4990421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987691_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266
ENSMUSG00000009090.18_4976245_4990180_1	chr11	+	1331	9	ISM	ENSMUSG00000009090.18	ENSMUST00000109897.8	3942	21	39421	2549	16712	-1648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCCTCCCTCCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	4976244	4990180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093
ENSMUSG00000009090.18_4976245_4991829_1	chr11	+	1538	11	ISM	ENSMUSG00000009090.18	ENST00000317368.11	2831	20	16712	-1	16712	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGGAACCCTGCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	4976244	4991829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987691_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ENSMUSG00000009090.18_4980977_4990421_1	chr11	+	1305	9	ISM	ENSMUSG00000009090.18	ENSMUST00000109897.8	3942	21	44153	2308	21444	-1407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGCCCCTGTACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	4980976	4990421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266
ENSMUSG00000009090.18_4990305_4992792_1	chr11	+	1192	2	ISM	ENSMUSG00000009090.18	ENSMUST00000101613.3	3735	21	30775	-63	30772	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGGCTATGGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	4990304	4992792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4990422_4991717
ENSMUSG00000009097.11_18399930_18401530_1	chr16	-	1334	2	ISM	ENSMUSG00000009097.11	ENSMUST00000232335.2	2511	7	4189	201	4189	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAAACTCCCGTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	18401530	18399929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18401207_18401473
ENSMUSG00000009097.11_18400307_18402986_1	chr16	-	1378	5	ISM	ENSMUSG00000009097.11	ENSMUST00000232335.2	2511	7	2733	578	2733	147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTCCCTCAGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	18402986	18400306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18401207_18401473_18401575_18401656_18401725_18402168_18402325_18402833
ENSMUSG00000009207.16_74351417_74360014_1	chr2	-	1265	2	ISM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	49278	739	48553	-739	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAAGACAGTTAAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	74360014	74351416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_74352642_74359974
ENSMUSG00000009207.16_74351471_74360098_1	chr2	-	1295	2	ISM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	49194	793	48469	-793	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATGGCATAGGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	74360098	74351470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_74352642_74359974
ENSMUSG00000009207.16_74351677_74362325_1	chr2	-	1313	4	ISM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	46967	999	46242	707	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTGTTAAATATCTAG	NA	NA	NA	NA	NA	NA	NA	NA	74362325	74351676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219
ENSMUSG00000009207.16_74352029_74378372_1	chr2	-	1265	7	ISM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	30920	1351	30195	355	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACTTTGGAGATATTTG	NA	NA	NA	NA	NA	NA	NA	NA	74378372	74352028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318
ENSMUSG00000009207.16_74352384_74403954_1	chr2	-	1343	12	ISM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	5338	1706	4613	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGGATATTTGTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	74403954	74352383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881
ENSMUSG00000009207.16_74352545_74409247_1	chr2	-	1283	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	45	1867	45	-161	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTCCAGAGGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	74409247	74352544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ENSMUSG00000009214.10_26951648_26962191_1	chr2	-	1376	5	NNC	ENSMUSG00000009214.10	novel	1382	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTCTGTCTGCTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	26962191	26951647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_26952350_26952713_26952825_26956302_26956452_26957364_26957480_26961892
ENSMUSG00000009214.10_26951648_26962191_2	chr2	-	1376	5	NNC	ENSMUSG00000009214.10	novel	1382	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTCTGTCTGCTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	26962191	26951647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_26952350_26952713_26952831_26956302_26956452_26957364_26957480_26961898
ENSMUSG00000009216.8_27002490_27003678_1	chr2	-	532	2	ISM	ENSMUSG00000009216.8	ENST00000496132.2	728	3	9265	-1	9265	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTATCCTGCCGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	27003678	27002489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27002903_27003559
ENSMUSG00000009216.8_27002619_27012874_1	chr2	-	531	3	FSM	ENSMUSG00000009216.8	ENST00000496132.2	728	3	69	128	69	-128	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGCCAGGAAGATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	27012874	27002618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_27002903_27003559_27003676_27012743
ENSMUSG00000009291.14_77417656_77428745_1	chr10	+	334	4	ISM	ENSMUSG00000009291.14	ENSMUST00000009435.12	2294	6	102	5821	19	-4358	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGCTGCTACTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	77417655	77428745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77417762_77423084_77423138_77425467_77425577_77428679
ENSMUSG00000009291.14_77423084_77428851_1	chr10	+	335	3	ISM	ENSMUSG00000009291.14	ENSMUST00000162943.9	721	6	4841	4252	4841	-4252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTGGGCTCCTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	77423083	77428851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77423138_77425467_77425577_77428679
ENSMUSG00000009291.14_77428679_77432964_1	chr10	+	323	3	ISM	ENSMUSG00000009291.14	ENSMUST00000162943.9	721	6	10436	139	10436	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCCTGCAGAGACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	77428678	77432964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77428852_77429697_77429745_77432861
ENSMUSG00000009291.14_77428806_77433066_1	chr10	+	298	3	ISM	ENSMUSG00000009291.14	ENSMUST00000162943.9	721	6	10563	37	10563	-37	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCCTCTGTGTCTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	77428805	77433066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77428852_77429697_77429745_77432861
ENSMUSG00000009292.19_77746005_77753988_1	chr10	-	611	6	NNC	ENSMUSG00000009292.19	novel	766	7	NA	NA	865	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGGGCCACAATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	77753988	77746004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_77746130_77747123_77747240_77748411_77748514_77749638_77749745_77750545_77750633_77753913
ENSMUSG00000009292.19_77746005_77753988_2	chr10	-	604	6	NNC	ENSMUSG00000009292.19	novel	766	7	NA	NA	865	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGGGCCACAATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	77753988	77746004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_77746130_77747122_77747240_77748411_77748506_77749638_77749745_77750545_77750633_77753913
ENSMUSG00000009292.19_77746065_77754849_2	chr10	-	694	7	NNC	ENSMUSG00000009292.19	novel	766	7	NA	NA	4	-60	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCACAAGACCATCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	77754849	77746064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_77746130_77747122_77747240_77748411_77748514_77749638_77749745_77750553_77750633_77753913_77753988_77754698
ENSMUSG00000009292.19_77746065_77754849_4	chr10	-	702	7	FSM	ENSMUSG00000009292.19	ENST00000621064.1	766	7	4	60	4	-60	multi-exon	FALSE	canonical	NA	NA	NA	NA	1334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCACAAGACCATCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	77754849	77746064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_77746130_77747122_77747240_77748411_77748514_77749638_77749745_77750545_77750633_77753913_77753988_77754698
ENSMUSG00000009356.13_87697682_87707349_1	chr11	-	1462	7	ISM	ENSMUSG00000009356.13	ENST00000421678.6	1896	10	5756	10	5756	-10	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGTAGGAACCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	87707349	87697681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_87697881_87698068_87698307_87699952_87700127_87700941_87701195_87705072_87705234_87705722_87706048_87707237
ENSMUSG00000009356.13_87697774_87707430_1	chr11	-	1451	7	ISM	ENSMUSG00000009356.13	ENST00000421678.6	1896	10	5675	102	5675	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAACCCGTTCCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	87707430	87697773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_87697881_87698068_87698307_87699952_87700127_87700941_87701195_87705072_87705234_87705722_87706048_87707237
ENSMUSG00000009356.13_87698248_87713045_1	chr11	-	1448	9	ISM	ENSMUSG00000009356.13	ENST00000421678.6	1896	10	60	576	60	-576	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGCTGTCATGAAAAACGA	NA	NA	NA	NA	NA	NA	NA	NA	87713045	87698247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_87698307_87699952_87700127_87700941_87701195_87705072_87705234_87705722_87706048_87707237_87707445_87708123_87708254_87708559_87708678_87713024
ENSMUSG00000009406.14_20800081_20801953_1	chrX	-	1791	2	ISM	ENSMUSG00000009406.14	ENST00000392510.3	1010	5	1816	-1610	1816	-447	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGTTGGGATACACTTG	NA	NA	NA	NA	NA	NA	NA	NA	20801953	20800080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_20801788_20801869
ENSMUSG00000009406.14_20800814_20803619_1	chrX	-	1772	4	ISM	ENSMUSG00000009406.14	ENST00000392510.3	1010	5	150	-877	150	861	intron_retention	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTAGGCGGGTGGGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	20803619	20800813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355
ENSMUSG00000009406.14_20800870_20803695_1	chrX	-	1792	4	ISM	ENSMUSG00000009406.14	ENST00000392510.3	1010	5	74	-821	74	805	intron_retention	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGGGCTTTTCAATAG	NA	NA	NA	NA	NA	NA	NA	NA	20803695	20800869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355
ENSMUSG00000009406.14_20801092_20807899_1	chrX	-	1784	5	ISM	ENSMUSG00000009406.14	ENSMUST00000009550.14	3548	6	8948	1458	104	583	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTCTCAAGTAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	20807899	20801091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792
ENSMUSG00000009406.14_20801295_20816847_1	chrX	-	1887	6	FSM	ENSMUSG00000009406.14	ENSMUST00000009550.14	3548	6	0	1661	0	380	multi-exon	FALSE	canonical	NA	NA	NA	NA	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCCCTTGGGGAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	20816847	20801294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678
ENSMUSG00000009406.14_20801351_20816847_1	chrX	-	1831	6	FSM	ENSMUSG00000009406.14	ENSMUST00000009550.14	3548	6	0	1717	0	324	multi-exon	FALSE	canonical	NA	NA	NA	NA	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACAAGACAATCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	20816847	20801350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678
ENSMUSG00000009406.14_20801675_20807872_1	chrX	-	293	4	ISM	ENSMUSG00000009406.14	ENST00000343894.8	729	6	8963	0	131	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTGGAGTCCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	20807872	20801674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_20801788_20801869_20801910_20803742_20803803_20807792
ENSMUSG00000009406.14_20801675_20807933_1	chrX	-	353	4	NNC	ENSMUSG00000009406.14	novel	729	6	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTGGAGTCCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	20807933	20801674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_20801788_20801870_20801910_20803742_20803803_20807792
ENSMUSG00000009406.14_20802688_20803532_1	chrX	-	357	3	ISM	ENSMUSG00000009406.14	ENST00000392510.3	1010	5	237	997	237	-991	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAGAACACAGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	20803532	20802687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_20802903_20803355_20803411_20803445
ENSMUSG00000009406.14_20802860_20803685_1	chrX	-	338	3	ISM	ENSMUSG00000009406.14	ENST00000392510.3	1010	5	84	1169	84	-1163	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGTCTGGACCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	20803685	20802859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_20802903_20803355_20803411_20803445
ENSMUSG00000009470.18_98979676_98991738_1	chr13	-	1987	7	ISM	ENSMUSG00000009470.18	ENST00000680533.1	8563	23	71247	4309	35564	3269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTACAGAGTGAGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	98991738	98979675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98981129_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650
ENSMUSG00000009470.18_98979825_98991952_1	chr13	-	1971	8	ISM	ENSMUSG00000009470.18	ENST00000680533.1	8563	23	71033	4458	35350	3120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTAATTTCTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	98991952	98979824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98981129_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819
ENSMUSG00000009470.18_98980136_98994969_1	chr13	-	1957	10	ISM	ENSMUSG00000009470.18	ENST00000680533.1	8563	23	68016	4769	32333	2809	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTGTAGTTTACAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	98994969	98980135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98981129_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893
ENSMUSG00000009470.18_98980239_98996296_1	chr13	-	1976	11	ISM	ENSMUSG00000009470.18	ENST00000680533.1	8563	23	66689	4872	31006	2706	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGCCAGTTTGGGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	98996296	98980238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98981129_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270
ENSMUSG00000009470.18_98980317_98996360_1	chr13	-	1962	11	ISM	ENSMUSG00000009470.18	ENST00000680533.1	8563	23	66625	4950	30942	2628	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGAAAGTGATGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	98996360	98980316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98981129_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270
ENSMUSG00000009470.18_98980506_98997211_1	chr13	-	1972	12	ISM	ENSMUSG00000009470.18	ENST00000680533.1	8563	23	65774	5139	30091	2439	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTGCGGGCTGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	98997211	98980505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98981129_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148
ENSMUSG00000009470.18_98980673_99000258_1	chr13	-	1938	13	ISM	ENSMUSG00000009470.18	ENST00000680533.1	8563	23	62727	5306	27044	2272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGATGAAGAACTACTT	NA	NA	NA	NA	NA	NA	NA	NA	99000258	98980672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98981129_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215
ENSMUSG00000009470.18_98980869_98982986_1	chr13	-	318	2	ISM	ENSMUSG00000009470.18	ENST00000679378.1	8207	22	44316	5322	44316	2076	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTACTTTCTGGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	98982986	98980868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98981129_98982928
ENSMUSG00000009470.18_98981057_99003638_1	chr13	-	1945	16	ISM	ENSMUSG00000009470.18	ENST00000680533.1	8563	23	59347	5690	23664	1888	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAGTAGGGAATACAGT	NA	NA	NA	NA	NA	NA	NA	NA	99003638	98981056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98981129_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553
ENSMUSG00000009470.18_98982990_98991886_1	chr13	-	683	8	ISM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	35662	7463	35416	-45	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCAGCTTTTTATGGT	NA	NA	NA	NA	NA	NA	NA	NA	98991886	98982989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819
ENSMUSG00000009470.18_98983051_98991946_1	chr13	-	682	8	ISM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	35602	7524	35356	-106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTTGGGGATGAAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	98991946	98983050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819
ENSMUSG00000009470.18_98985731_98991741_1	chr13	-	298	4	ISM	ENSMUSG00000009470.18	ENST00000679378.1	8207	22	35561	10184	35561	-2786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGATTCAGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	98991741	98985730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98985763_98986615_98986692_98989907_98990007_98991650
ENSMUSG00000009470.18_98985731_99012160_1	chr13	-	1899	16	ISM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	15388	10204	15142	-2786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGATTCAGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	99012160	98985730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111
ENSMUSG00000009470.18_98986637_98991873_1	chr13	-	296	4	ISM	ENSMUSG00000009470.18	ENST00000679378.1	8207	22	35429	11090	35429	-3692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAGTTTATAAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	98991873	98986636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98986692_98989907_98990007_98991650_98991739_98991819
ENSMUSG00000009470.18_98989363_99015234_1	chr13	-	1983	15	ISM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	12314	13836	12068	-6418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCACGTAACTGAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	99015234	98989362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127
ENSMUSG00000009470.18_98989943_99021112_1	chr13	-	1942	15	ISM	ENSMUSG00000009470.18	ENST00000679378.1	8207	22	6190	14396	6190	-6998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGGGCGATTGGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	99021112	98989942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022
ENSMUSG00000009470.18_98992033_99062862_1	chr13	-	1931	16	ISM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	30	16506	-22	-9088	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTATATCAGCGTTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	99062862	98992032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ENSMUSG00000009470.18_99000233_99015144_1	chr13	-	688	7	ISM	ENSMUSG00000009470.18	ENST00000679378.1	8207	22	12158	24686	12158	-17288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTGGAACCTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	99015144	99000232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127
ENSMUSG00000009470.18_99000935_99025049_1	chr13	-	703	7	ISM	ENSMUSG00000009470.18	ENST00000523768.5	2633	22	37791	17990	2253	-17990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAAACCATTCTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	99025049	99000934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99024973
ENSMUSG00000009470.18_99001475_99027299_1	chr13	-	758	7	ISM	ENSMUSG00000009470.18	ENST00000523768.5	2633	22	35541	18530	3	-18530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCCTGCACAGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	99027299	99001474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99024973_99025050_99027184
ENSMUSG00000009470.18_99003554_99062862_1	chr13	-	740	7	ISM	ENSMUSG00000009470.18	ENST00000523768.5	2633	22	-22	20609	-22	-20609	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACCAAAGCATCCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	99062862	99003553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99024973_99025050_99027184_99027299_99062758
ENSMUSG00000009471.5_46026024_46027774_1	chr7	+	986	3	FSM	ENSMUSG00000009471.5	ENSMUST00000072514.3	1861	3	126	749	126	-749	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGCAGGCTCAAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	46026023	46027774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_46026724_46027163_46027243_46027567
ENSMUSG00000009471.5_46026364_46028132_1	chr7	+	1004	3	FSM	ENSMUSG00000009471.5	ENSMUST00000072514.3	1861	3	466	391	466	-391	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCTTTCCTCATAGCA	NA	NA	NA	NA	NA	NA	NA	NA	46026363	46028132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_46026724_46027163_46027243_46027567
ENSMUSG00000009471.5_46026442_46028210_1	chr7	+	1004	3	FSM	ENSMUSG00000009471.5	ENSMUST00000072514.3	1861	3	544	313	544	-313	multi-exon	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCCTCCTGGCACCC	NA	NA	NA	NA	NA	NA	NA	NA	46026441	46028210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_46026724_46027163_46027243_46027567
ENSMUSG00000009471.5_46027163_46028523_1	chr7	+	1036	2	ISM	ENSMUSG00000009471.5	ENSMUST00000072514.3	1861	3	1265	0	1265	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCTGGCTTTTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	46027162	46028523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_46027243_46027567
ENSMUSG00000009535.14_68439034_68454598_1	chr18	+	1429	10	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	5608	3325	5563	-379	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATAGGGATGAGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	68439033	68454598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ENSMUSG00000009535.14_68439091_68454665_1	chr18	+	1439	10	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	5665	3258	5620	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACTCTAGCAAGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	68439090	68454665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ENSMUSG00000009535.14_68439169_68454742_1	chr18	+	1438	10	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	5743	3181	5698	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGTGTGAATGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	68439168	68454742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ENSMUSG00000009535.14_68440740_68454977_1	chr18	+	1548	9	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	7314	2946	7269	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGCAATTCTGAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	68440739	68454977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ENSMUSG00000009535.14_68446746_68455239_1	chr18	+	1442	6	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	13320	2684	13275	262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATGCATTTCAGATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	68446745	68455239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ENSMUSG00000009535.14_68446826_68455318_1	chr18	+	1441	6	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	13400	2605	13355	341	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGCCCGTCTCACAACA	NA	NA	NA	NA	NA	NA	NA	NA	68446825	68455318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ENSMUSG00000009535.14_68451106_68455640_1	chr18	+	1465	4	ISM	ENSMUSG00000009535.14	ENSMUST00000025427.14	1852	10	17635	-663	17635	663	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTTTTAAAATAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	68451105	68455640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_68451183_68452188_68452291_68453296_68453331_68454388
ENSMUSG00000009549.15_118306586_118309514_1	chr2	-	349	3	NNC	ENSMUSG00000009549.15	novel	798	5	NA	NA	602	-255	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATGGGCTTGGGCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	118309514	118306585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_118306789_118307307_118307336_118309396
ENSMUSG00000009549.15_118306586_118309514_2	chr2	-	343	2	NNC	ENSMUSG00000009549.15	novel	587	3	NA	NA	602	-255	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATGGGCTTGGGCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	118309514	118306585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_118306811_118309396
ENSMUSG00000009549.15_118306642_118310116_1	chr2	-	411	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	76	311	0	-311	multi-exon	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCACCTCTGTATGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	118310116	118306641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
ENSMUSG00000009549.15_118306726_118310129_1	chr2	-	340	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	63	395	-13	-395	multi-exon	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAGAAGAGCAAACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	118310129	118306725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
ENSMUSG00000009549.15_118306772_118310192_1	chr2	-	357	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	0	441	0	-441	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCCAACATGGACGGGC	NA	NA	NA	NA	NA	NA	NA	NA	118310192	118306771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
ENSMUSG00000009555.17_32599868_32602769_1	chr2	-	622	5	ISM	ENSMUSG00000009555.17	ENSMUST00000009699.16	1733	7	27	2418	27	-2412	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTAGCTAAGAATAGCC	NA	NA	NA	NA	NA	NA	NA	NA	32602769	32599867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
ENSMUSG00000009563.17_32647246_32651742_1	chr2	+	1022	5	FSM	ENSMUSG00000009563.17	ENSMUST00000009707.14	1536	5	0	514	0	-209	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTCTGAGAAGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	32647245	32651742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32647463_32648682_32648949_32649538_32649715_32650600_32650729_32651507
ENSMUSG00000009563.17_32647331_32651742_1	chr2	+	937	5	FSM	ENSMUSG00000009563.17	ENSMUST00000009707.14	1536	5	85	514	74	-209	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTCTGAGAAGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	32647330	32651742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32647463_32648682_32648949_32649538_32649715_32650600_32650729_32651507
ENSMUSG00000009563.17_32647331_32651857_1	chr2	+	1052	5	FSM	ENSMUSG00000009563.17	ENSMUST00000009707.14	1536	5	85	399	74	-94	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGCACAATGTTAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	32647330	32651857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32647463_32648682_32648949_32649538_32649715_32650600_32650729_32651507
ENSMUSG00000009563.17_32649632_32652256_1	chr2	+	960	3	ISM	ENSMUSG00000009563.17	ENSMUST00000009707.14	1536	5	2386	0	2375	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGACCAAAGTTTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	32649631	32652256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32649715_32650600_32650729_32651507
ENSMUSG00000009566.13_32572829_32575401_1	chr2	-	795	3	ISM	ENSMUSG00000009566.13	ENST00000373225.7	1990	14	7333	117	7333	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGTCCAGCTTACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	32575401	32572828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32573481_32574761_32574829_32575325
ENSMUSG00000009566.13_32573111_32575401_1	chr2	-	513	3	ISM	ENSMUSG00000009566.13	ENST00000373225.7	1990	14	7333	399	7333	-399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGTTCTGAAACTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	32575401	32573110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32573481_32574761_32574829_32575325
ENSMUSG00000009566.13_32573111_32576647_1	chr2	-	746	5	ISM	ENSMUSG00000009566.13	ENST00000373225.7	1990	14	6087	399	6087	-399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	901	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGTTCTGAAACTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	32576647	32573110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565
ENSMUSG00000009566.13_32573314_32577175_1	chr2	-	562	6	ISM	ENSMUSG00000009566.13	ENST00000630236.2	1831	13	5560	602	5559	-602	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTACTAGGACGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	32577175	32573313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576648_32577156
ENSMUSG00000009566.13_32573414_32577514_1	chr2	-	771	8	ISM	ENSMUSG00000009566.13	ENST00000373225.7	1990	14	5220	702	5220	-702	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGGCCTGGCTGAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	32577514	32573413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576648_32576737_32576898_32577156_32577235_32577424
ENSMUSG00000009566.13_32573468_32577531_1	chr2	-	734	8	ISM	ENSMUSG00000009566.13	ENST00000373225.7	1990	14	5203	756	5203	-756	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGACTCTGGACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	32577531	32573467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576648_32576737_32576898_32577156_32577235_32577424
ENSMUSG00000009566.13_32574762_32577531_1	chr2	-	561	6	ISM	ENSMUSG00000009566.13	ENST00000630236.2	1831	13	5204	2050	5203	564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGGGGGCAGATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	32577531	32574761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32574829_32575325_32575402_32575730_32575882_32576565_32576648_32577156_32577235_32577424
ENSMUSG00000009566.13_32574762_32577677_1	chr2	-	781	8	ISM	ENSMUSG00000009566.13	ENST00000373225.7	1990	14	5057	2050	5057	564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGGGGGCAGATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	32577677	32574761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32574829_32575325_32575402_32575730_32575882_32576565_32576648_32576737_32576898_32577156_32577235_32577424_32577528_32577613
ENSMUSG00000009566.13_32575326_32577677_1	chr2	-	554	6	ISM	ENSMUSG00000009566.13	ENST00000373228.5	995	11	5058	0	5057	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGGACCCACCTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	32577677	32575325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32575402_32575730_32575882_32576565_32576648_32577156_32577235_32577424_32577528_32577613
ENSMUSG00000009566.13_32575326_32577851_1	chr2	-	792	8	ISM	ENSMUSG00000009566.13	ENST00000373225.7	1990	14	4883	2614	4883	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGGACCCACCTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	32577851	32575325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32575402_32575730_32575882_32576565_32576648_32576737_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771
ENSMUSG00000009566.13_32575731_32577851_1	chr2	-	556	6	ISM	ENSMUSG00000009566.13	ENST00000373228.5	995	11	4884	405	4883	-405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTCTCTTGCAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	32577851	32575730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32575882_32576565_32576648_32577156_32577235_32577424_32577528_32577613_32577676_32577771
ENSMUSG00000009566.13_32575731_32578048_1	chr2	-	831	8	ISM	ENSMUSG00000009566.13	ENST00000373225.7	1990	14	4686	3019	4686	-405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTCTCTTGCAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	32578048	32575730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32575882_32576565_32576648_32576737_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931
ENSMUSG00000009566.13_32575842_32577973_1	chr2	-	485	7	ISM	ENSMUSG00000009566.13	ENST00000373228.5	995	11	4762	516	4761	-516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCGGGGACCCCTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	32577973	32575841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32575882_32576565_32576648_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931
ENSMUSG00000009566.13_32575848_32581268_1	chr2	-	779	9	ISM	ENSMUSG00000009566.13	ENST00000373225.7	1990	14	1466	3136	1466	-522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTCCAGCGGGGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	32581268	32575847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32575882_32576565_32576648_32576737_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201
ENSMUSG00000009566.13_32576514_32582518_1	chr2	-	851	9	ISM	ENSMUSG00000009566.13	ENST00000373225.7	1990	14	216	3802	216	-1188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTATGTTGAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	32582518	32576513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32576648_32576737_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462
ENSMUSG00000009566.13_32576861_32582686_1	chr2	-	674	9	ISM	ENSMUSG00000009566.13	ENST00000373225.7	1990	14	48	4149	48	-1535	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGTTGGACTGCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	32582686	32576860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604
ENSMUSG00000009575.15_103105860_103109292_1	chr15	-	2424	2	ISM	ENSMUSG00000009575.15	ENSMUST00000108813.10	3661	5	14487	746	14440	-746	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCTAAGAAGTCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	103109292	103105859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103108219_103109227
ENSMUSG00000009575.15_103106043_103114105_1	chr15	-	2464	3	ISM	ENSMUSG00000009575.15	ENSMUST00000108813.10	3661	5	9674	929	9627	-929	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTAGCCAGAGCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	103114105	103106042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103108219_103109227_103109329_103113918
ENSMUSG00000009575.15_103106172_103121600_1	chr15	-	2437	4	ISM	ENSMUSG00000009575.15	ENSMUST00000108813.10	3661	5	2179	1058	2132	-1058	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAATATCAAATGCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	103121600	103106171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498
ENSMUSG00000009575.15_103106324_103148243_1	chr15	-	2450	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	0	6353	0	-1210	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGGTAGACAGACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	103148243	103106323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ENSMUSG00000009585.19_79776656_79792655_1	chr15	+	2437	9	FSM	ENSMUSG00000009585.19	ENSMUST00000109620.10	2459	9	47	-25	6	18	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTTTGATTGAGGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	79776655	79792655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUSG00000009614.17_27081895_27087703_1	chr2	-	464	3	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	42023	0	42023	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGAGTGAACCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	27087703	27081894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27082027_27086660_27086830_27087540
ENSMUSG00000009614.17_27081990_27101074_1	chr2	-	421	4	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	28652	95	28652	-95	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGCCAAGTGGTGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	27101074	27081989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27082027_27086660_27086830_27087540_27087704_27101022
ENSMUSG00000009614.17_27086720_27105079_1	chr2	-	397	4	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	24647	4825	24647	-4825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGAAGCAGCGTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	27105079	27086719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27086830_27087540_27087704_27101022_27101117_27105049
ENSMUSG00000009614.17_27086720_27105136_1	chr2	-	454	4	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	24590	4825	24590	-4825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGAAGCAGCGTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	27105136	27086719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27086830_27087540_27087704_27101022_27101117_27105049
ENSMUSG00000009614.17_27087657_27110688_1	chr2	-	437	5	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	19038	5762	19038	-5762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTACCCCGGGCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	27110688	27087656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27087704_27101022_27101117_27105049_27105198_27108809_27108924_27110654
ENSMUSG00000009614.17_27101068_27110793_1	chr2	-	450	4	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	18933	19173	18933	-19173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCTTCTCCACCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	27110793	27101067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27101117_27105049_27105198_27108809_27108924_27110654
ENSMUSG00000009614.17_27105175_27117123_1	chr2	-	425	5	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	12603	23280	12603	-23280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGGCTGTGGCCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	27117123	27105174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27105198_27108809_27108924_27110654_27110794_27114980_27115095_27117088
ENSMUSG00000009614.17_27108885_27118303_1	chr2	-	424	5	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	11423	26990	11423	-26990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGAGAGCGACCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	27118303	27108884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27108924_27110654_27110794_27114980_27115095_27117088_27117173_27118255
ENSMUSG00000009614.17_27110763_27120483_1	chr2	-	405	5	ISM	ENSMUSG00000009614.17	ENSMUST00000102886.10	4521	21	16795	32358	9243	-28868	internal_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGCTGTGTTCAACATG	NA	NA	NA	NA	NA	NA	NA	NA	27120483	27110762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27110794_27114980_27115095_27117088_27117173_27118255_27118398_27120449
ENSMUSG00000009614.17_27117138_27124368_1	chr2	-	421	5	ISM	ENSMUSG00000009614.17	ENSMUST00000102886.10	4521	21	12910	38733	5358	-35243	internal_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGGATGGGAACGGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	27124368	27117137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27117173_27118255_27118398_27120449_27120541_27120782_27120870_27124302
ENSMUSG00000009614.17_27118347_27125534_1	chr2	-	404	5	ISM	ENSMUSG00000009614.17	ENSMUST00000102886.10	4521	21	11744	39942	4192	-36452	internal_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGAGTCCTATGCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	27125534	27118346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27118398_27120449_27120541_27120782_27120870_27124302_27124433_27125489
ENSMUSG00000009614.17_27120844_27129676_1	chr2	-	412	5	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	50	38949	50	-38949	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGGGGGAGGCTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	27129676	27120843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27120870_27124302_27124433_27125489_27125595_27129378_27129480_27129626
ENSMUSG00000009633.4_192954983_192955338_1	chr1	-	170	2	FSM	ENSMUSG00000009633.4	ENSMUST00000009777.4	871	2	187	514	187	-514	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTTCGGTGTGGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	192955338	192954982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_192955111_192955296
ENSMUSG00000009633.4_192955036_192955396_1	chr1	-	175	2	FSM	ENSMUSG00000009633.4	ENSMUST00000009777.4	871	2	129	567	129	-567	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAAGCCCCGAGGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	192955396	192955035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_192955111_192955296
ENSMUSG00000009640.12_117531883_117538562_1	chr4	-	1351	9	ISM	ENSMUSG00000009640.12	ENSMUST00000102687.4	1566	11	908	5	908	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCTGATTGTTTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	117538562	117531882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470
ENSMUSG00000009640.12_117532268_117539450_1	chr4	-	1382	10	ISM	ENSMUSG00000009640.12	ENSMUST00000102687.4	1566	11	20	390	20	-390	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGGATACCATCATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	117539450	117532267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539180_117539410
ENSMUSG00000009647.14_59282806_59302297_1	chr10	-	2379	5	ISM	ENSMUSG00000009647.14	ENST00000536019.5	3106	8	149748	-2	-8315	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGCATCTCGTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	59302297	59282805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275
ENSMUSG00000009647.14_59282806_59302339_1	chr10	-	2421	5	ISM	ENSMUSG00000009647.14	ENST00000536019.5	3106	8	149706	-2	-8357	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGCATCTCGTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	59302339	59282805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275
ENSMUSG00000009647.14_59282973_59303484_1	chr10	-	2332	6	ISM	ENSMUSG00000009647.14	ENST00000536019.5	3106	8	148561	165	-9502	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTAAGAAGGCATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	59303484	59282972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447
ENSMUSG00000009647.14_59283075_59326946_1	chr10	-	2402	7	ISM	ENSMUSG00000009647.14	ENST00000536019.5	3106	8	125099	267	-32964	-267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGCCCGCCTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	59326946	59283074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447_59303619_59326908
ENSMUSG00000009647.14_59283241_59452477_1	chr10	-	2400	8	FSM	ENSMUSG00000009647.14	ENSMUST00000020312.13	2872	8	37	435	37	-433	multi-exon	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGAGTTTCTTTTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	59452477	59283240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447_59303619_59326908_59326979_59452345
ENSMUSG00000009647.14_59283291_59452477_1	chr10	-	2350	8	FSM	ENSMUSG00000009647.14	ENSMUST00000020312.13	2872	8	37	485	37	-483	multi-exon	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGTTTTGGTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	59452477	59283290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447_59303619_59326908_59326979_59452345
ENSMUSG00000009647.14_59283350_59452514_1	chr10	-	2328	8	FSM	ENSMUSG00000009647.14	ENSMUST00000020312.13	2872	8	0	544	0	-542	multi-exon	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGGGGACAGGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	59452514	59283349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447_59303619_59326908_59326979_59452345
ENSMUSG00000009654.5_59259783_59274459_1	chr10	-	864	7	FSM	ENSMUSG00000009654.5	ENST00000622652.1	1166	7	277	25	277	-25	multi-exon	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCATCGACTGGGAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	59274459	59259782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_59259935_59261198_59261299_59265312_59265474_59266714_59266838_59271688_59271812_59273531_59273640_59274362
ENSMUSG00000009654.5_59259842_59274533_1	chr10	-	877	7	NNC	ENSMUSG00000009654.5	novel	1166	7	NA	NA	203	-84	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTGAGGACGAGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	59274533	59259841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_59259935_59261198_59261299_59265312_59265474_59266714_59266838_59271688_59271812_59273531_59273640_59274364
ENSMUSG00000009654.5_59261198_59274597_1	chr10	-	851	6	ISM	ENSMUSG00000009654.5	ENST00000622652.1	1166	7	139	1440	139	-1440	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGGATGCCCTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	59274597	59261197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_59261299_59265312_59265474_59266714_59266838_59271688_59271812_59273531_59273640_59274362
ENSMUSG00000009654.5_59261198_59274734_1	chr10	-	988	6	ISM	ENSMUSG00000009654.5	ENST00000622652.1	1166	7	2	1440	2	-1440	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGGATGCCCTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	59274734	59261197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_59261299_59265312_59265474_59266714_59266838_59271688_59271812_59273531_59273640_59274362
ENSMUSG00000009654.5_59265313_59274737_1	chr10	-	890	5	ISM	ENSMUSG00000009654.5	ENST00000622652.1	1166	7	-1	5555	-1	-5555	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTTCCCTGGAAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	59274737	59265312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_59265474_59266714_59266838_59271688_59271812_59273531_59273640_59274362
ENSMUSG00000009681.11_75011133_75016075_1	chr10	+	339	4	ISM	ENSMUSG00000009681.11	ENST00000621462.4	532	5	25	1478	25	-1478	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCAGAAGGCATTGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	75011132	75016075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75011169_75012174_75012285_75013715_75013789_75015955
ENSMUSG00000009681.11_75012208_75017474_1	chr10	+	359	4	ISM	ENSMUSG00000009681.11	ENST00000621462.4	532	5	1100	79	1100	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCCTCAGAGAAGGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	75012207	75017474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75012285_75013715_75013789_75015955_75016091_75017400
ENSMUSG00000009681.11_75013716_75017553_1	chr10	+	356	3	NNC	ENSMUSG00000009681.11	novel	532	5	NA	NA	2608	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCCCAGGTATAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	75013715	75017553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_75013789_75015955_75016091_75017405
ENSMUSG00000009687.15_30732232_30741620_1	chr7	-	805	9	FSM	ENSMUSG00000009687.15	ENSMUST00000161684.8	1172	9	286	81	-49	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCCCACCCTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	30741620	30732231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30737245_30737354_30738462_30738520_30739607_30739683_30740821_30740883_30741514
ENSMUSG00000009687.15_30732353_30741675_1	chr7	-	739	9	FSM	ENSMUSG00000009687.15	ENSMUST00000161684.8	1172	9	231	202	-104	-121	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACTACACCAACTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	30741675	30732352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30737245_30737354_30738462_30738520_30739607_30739683_30740821_30740883_30741514
ENSMUSG00000009687.15_30734672_30741794_1	chr7	-	729	8	ISM	ENSMUSG00000009687.15	ENSMUST00000161684.8	1172	9	112	2521	112	-2440	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGCTGTTCATCACGG	NA	NA	NA	NA	NA	NA	NA	NA	30741794	30734671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30734709_30734810_30734841_30735860_30735942_30737245_30737354_30738462_30738520_30739607_30739683_30740821_30740883_30741514
ENSMUSG00000009687.15_30734811_30741906_1	chr7	-	804	7	ISM	ENSMUSG00000009687.15	ENSMUST00000161684.8	1172	9	0	2660	0	-2579	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTACCCCGCTCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	30741906	30734810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30734841_30735860_30735942_30737245_30737354_30738462_30738520_30739607_30739683_30740821_30740883_30741514
ENSMUSG00000009733.10_100409576_100426429_1	chr15	-	1146	11	ISM	ENSMUSG00000009733.10	ENST00000548115.5	1667	12	23299	0	23239	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGACTCGGTACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	100426429	100409575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100420269_100420377_100423447_100423554_100425757_100425835_100426275
ENSMUSG00000009733.10_100409689_100449257_1	chr15	-	1083	12	FSM	ENSMUSG00000009733.10	ENST00000548115.5	1667	12	471	113	411	-113	multi-exon	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTGTCGAACTCACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	100449257	100409688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205
ENSMUSG00000009733.10_100412685_100449655_1	chr15	-	1141	8	ISM	ENSMUSG00000009733.10	ENST00000548115.5	1667	12	73	3109	13	-3109	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTCTAAAACCAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	100449655	100412684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_100412734_100415830_100415920_100416450_100416562_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205
ENSMUSG00000009863.15_140688514_140698533_1	chr4	+	494	3	ISM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	0	7971	0	-7971	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCGGGGCTTTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	140688513	140698533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140688788_140693805_140693940_140698447
ENSMUSG00000009863.15_140688714_140701003_1	chr4	+	460	5	ISM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	200	5501	200	-5501	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATTGAGCCTTATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	140688713	140701003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974
ENSMUSG00000009863.15_140693894_140703465_1	chr4	+	426	5	ISM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	5380	3039	5380	-3039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGCCCCAGCTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	140693893	140703465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425
ENSMUSG00000009863.15_140698501_140704723_1	chr4	+	424	5	ISM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	9987	1781	9987	-1781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGGAACGCCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	140698500	140704723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688
ENSMUSG00000009863.15_140700284_140706385_1	chr4	+	439	5	ISM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	11770	119	11770	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAAGGAGAAGCGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	140700283	140706385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
ENSMUSG00000009863.15_140700975_140706504_1	chr4	+	511	4	ISM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	12461	0	12461	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCGTTACTCTCCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	140700974	140706504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140701092_140703425_140703528_140704688_140704812_140706335
ENSMUSG00000009894.16_59297960_59329020_1	chr11	-	1492	4	ISM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	11805	0	11805	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGGGTCTATAACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	59329020	59297959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803
ENSMUSG00000009894.16_59298291_59329339_1	chr11	-	1480	4	ISM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	11486	331	11486	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGAGGGCCATGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	59329339	59298290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803
ENSMUSG00000009894.16_59298291_59340742_1	chr11	-	1482	5	FSM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	83	331	83	-321	multi-exon	FALSE	canonical	NA	NA	NA	NA	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGAGGGCCATGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	59340742	59298290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59340740
ENSMUSG00000009905.6_106652693_106683232_1	chr1	-	607	8	ISM	ENSMUSG00000009905.6	ENST00000326575.9	937	9	4150	190	4150	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTCGCCGCTGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	106683232	106652692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106675217_106675314_106675500_106675567_106680941_106680999_106683173
ENSMUSG00000009905.6_106655406_106687413_1	chr1	-	672	8	ISM	ENSMUSG00000009905.6	ENST00000326575.9	937	9	-31	2903	-31	-2903	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGGATGGCCCCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	106687413	106655405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_106655461_106662276_106662361_106667060_106667145_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
ENSMUSG00000009907.18_106700141_106705090_1	chr1	-	370	3	ISM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	19368	2981	19307	-2981	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTTTGTAGGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	106705090	106700140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_106700279_106701736_106701878_106704999
ENSMUSG00000009907.18_106701811_106706752_1	chr1	-	341	3	ISM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	17706	4651	17645	-4651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCCTGGGGCTATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	106706752	106701810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_106701878_106704999_106705220_106706698
ENSMUSG00000009907.18_106708234_106717679_1	chr1	-	366	4	ISM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	6779	11074	6718	-11074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGTGCATTGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	106717679	106708233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_106708391_106710395_106710516_106714432_106714501_106717658
ENSMUSG00000009907.18_106710447_106719467_1	chr1	-	354	4	ISM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	4991	13287	4930	-13287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTAAAGAGGCTGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	106719467	106710446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_106710516_106714432_106714501_106717658_106717816_106719407
ENSMUSG00000009907.18_106719442_106724414_1	chr1	-	342	2	ISM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	44	22282	-17	-22282	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGCAGTATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	106724414	106719441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_106719520_106724150
ENSMUSG00000009927.10_44318436_44321349_1	chr9	+	998	4	FSM	ENSMUSG00000009927.10	ENSMUST00000216867.2	577	4	-558	137	0	-137	multi-exon	FALSE	canonical	NA	NA	NA	NA	3397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGAAGAAAAGTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	44318435	44321349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250
ENSMUSG00000009927.10_44318615_44321491_1	chr9	+	868	5	FSM	ENSMUSG00000009927.10	ENSMUST00000080300.9	1280	5	179	233	179	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGTGCATCTGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	44318614	44321491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
ENSMUSG00000009927.10_44318767_44321613_1	chr9	+	838	5	FSM	ENSMUSG00000009927.10	ENSMUST00000080300.9	1280	5	331	111	-225	-111	multi-exon	FALSE	canonical	NA	NA	NA	NA	2158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACGTGGTTGCTTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	44318766	44321613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
ENSMUSG00000009927.10_44318767_44321724_1	chr9	+	949	5	FSM	ENSMUSG00000009927.10	ENSMUST00000080300.9	1280	5	331	0	-225	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGACATTTATTCATAC	NA	NA	NA	NA	NA	NA	NA	NA	44318766	44321724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
ENSMUSG00000009927.10_44318957_44321724_1	chr9	+	759	5	FSM	ENSMUSG00000009927.10	ENSMUST00000080300.9	1280	5	521	0	-35	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGACATTTATTCATAC	NA	NA	NA	NA	NA	NA	NA	NA	44318956	44321724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
ENSMUSG00000009995.18_73326527_73333757_1	chrX	+	1627	10	FSM	ENSMUSG00000009995.18	ENSMUST00000069722.13	1851	10	224	0	-70	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTCTGTGTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	73326526	73333757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332267_73332321_73332710_73332789_73332904
ENSMUSG00000009995.18_73326614_73332215_1	chrX	+	537	5	ISM	ENSMUSG00000009995.18	ENST00000369776.8	850	7	17	802	0	-549	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTACCCTGCTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	73326613	73332215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73326779_73327253_73327300_73327537_73327624_73331624_73331706_73332056
ENSMUSG00000009995.18_73327253_73332791_1	chrX	+	559	5	ISM	ENSMUSG00000009995.18	ENST00000369776.8	850	7	656	226	639	27	internal_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCCTCCCAGGGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	73327252	73332791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73327300_73327537_73327624_73331624_73331706_73332056_73332321_73332710
ENSMUSG00000009995.18_73327543_73332791_1	chrX	+	507	4	ISM	ENSMUSG00000009995.18	ENST00000369776.8	850	7	946	226	929	27	internal_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCCTCCCAGGGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	73327542	73332791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73327624_73331624_73331706_73332056_73332321_73332710
ENSMUSG00000009995.18_73331626_73333017_1	chrX	+	535	4	ISM	ENSMUSG00000009995.18	ENST00000369776.8	850	7	5029	0	5012	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCTGTGCCCTGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	73331625	73333017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73331706_73332056_73332321_73332710_73332789_73332904
ENSMUSG00000010025.20_61135811_61139781_1	chr11	-	1431	2	ISM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	18230	132	18230	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAAAATATTTTGCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	61139781	61135810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61137148_61139687
ENSMUSG00000010025.20_61135870_61139850_1	chr11	-	1441	2	ISM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	18161	191	18161	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATCATTGGCCCGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	61139850	61135869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61137148_61139687
ENSMUSG00000010025.20_61136112_61144492_1	chr11	-	1415	4	ISM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	13519	433	13519	-433	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTAGATCCTAGTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	61144492	61136111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449
ENSMUSG00000010025.20_61136219_61147621_1	chr11	-	1489	5	ISM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	10390	540	10390	-540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAACTCACAGGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	61147621	61136218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564
ENSMUSG00000010025.20_61136571_61153161_1	chr11	-	1457	7	ISM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	4850	892	4850	-892	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGACCTAAACTGCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	61153161	61136570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044
ENSMUSG00000010025.20_61136760_61155148_1	chr11	-	1437	8	ISM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	2863	1081	2863	-1081	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTCCCAGCTACTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	61155148	61136759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071
ENSMUSG00000010025.20_61137080_61157741_1	chr11	-	1420	10	FSM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	270	1401	270	1273	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTTAAAATTGTACCCA	NA	NA	NA	NA	NA	NA	NA	NA	61157741	61137079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
ENSMUSG00000010025.20_61139898_61157953_1	chr11	-	1354	9	ISM	ENSMUSG00000010025.20	ENSMUST00000108715.3	2578	10	58	1545	58	-1545	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAATACAGTTTTGATAC	NA	NA	NA	NA	NA	NA	NA	NA	61157953	61139897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
ENSMUSG00000010044.13_107424653_107427967_1	chr9	+	1139	10	ISM	ENSMUSG00000010044.13	ENST00000360165.7	1470	11	-3	429	-3	-429	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGGCAGTAGCTCCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	107424652	107427967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107424748_107424998_107425108_107425868_107425986_107426078_107426133_107426226_107426365_107426478_107426568_107426986_107427247_107427482_107427609_107427696_107427819_107427938
ENSMUSG00000010044.13_107424998_107428065_1	chr9	+	1142	9	NNC	ENSMUSG00000010044.13	novel	1470	11	NA	NA	342	-331	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	812	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCGATCCTGGGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	107424997	107428065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107425108_107425868_107425986_107426078_107426133_107426226_107426365_107426478_107426568_107426986_107427247_107427482_107427609_107427697_107427819_107427938
ENSMUSG00000010044.13_107424998_107428065_2	chr9	+	1137	9	NNC	ENSMUSG00000010044.13	novel	1470	11	NA	NA	342	-331	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	820	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCGATCCTGGGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	107424997	107428065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107425108_107425868_107425986_107426078_107426133_107426226_107426365_107426478_107426568_107426986_107427247_107427488_107427609_107427696_107427819_107427938
ENSMUSG00000010044.13_107425078_107428168_1	chr9	+	1072	10	NNC	ENSMUSG00000010044.13	novel	1470	11	NA	NA	422	-228	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAAGCACTGGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	107425077	107428168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107425108_107425868_107425986_107426078_107426133_107426226_107426365_107426478_107426568_107426986_107427247_107427482_107427609_107427696_107427819_107427938_107428065_107428158
ENSMUSG00000010044.13_107425867_107428168_1	chr9	+	1043	9	ISM	ENSMUSG00000010044.13	ENST00000360165.7	1470	11	1211	228	1211	-228	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAAGCACTGGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	107425866	107428168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107425986_107426078_107426133_107426226_107426365_107426478_107426568_107426986_107427247_107427482_107427609_107427696_107427819_107427938_107428065_107428159
ENSMUSG00000010044.13_107425902_107428236_1	chr9	+	1076	9	ISM	ENSMUSG00000010044.13	ENST00000360165.7	1470	11	1246	160	1246	-160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGTAGCTGCCGAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	107425901	107428236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107425986_107426078_107426133_107426226_107426365_107426478_107426568_107426986_107427247_107427482_107427609_107427696_107427819_107427938_107428065_107428159
ENSMUSG00000010044.13_107425904_107428236_1	chr9	+	1070	9	NNC	ENSMUSG00000010044.13	novel	1470	11	NA	NA	1248	-160	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	418	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGTAGCTGCCGAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	107425903	107428236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107425986_107426078_107426133_107426226_107426365_107426478_107426568_107426986_107427247_107427482_107427609_107427696_107427819_107427938_107428065_107428163
ENSMUSG00000010044.13_107425933_107428307_1	chr9	+	1116	9	ISM	ENSMUSG00000010044.13	ENST00000360165.7	1470	11	1277	89	1277	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	905	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGTCAGACCTCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	107425932	107428307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107425986_107426078_107426133_107426226_107426365_107426478_107426568_107426986_107427247_107427482_107427609_107427696_107427819_107427938_107428065_107428159
ENSMUSG00000010044.13_107426078_107428418_1	chr9	+	1175	8	ISM	ENSMUSG00000010044.13	ENST00000360165.7	1470	11	1422	-22	1422	22	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCATCAGCAAACTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	107426077	107428418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107426133_107426226_107426365_107426478_107426568_107426986_107427247_107427482_107427609_107427696_107427819_107427938_107428065_107428159
ENSMUSG00000010044.13_107426225_107428418_1	chr9	+	1116	7	NNC	ENSMUSG00000010044.13	novel	1470	11	NA	NA	1569	22	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCATCAGCAAACTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	107426224	107428418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107426365_107426478_107426568_107426986_107427247_107427488_107427609_107427696_107427819_107427938_107428065_107428159
ENSMUSG00000010045.3_107411259_107415872_1	chr9	+	2074	2	NNC	ENSMUSG00000010045.3	novel	2194	2	NA	NA	115	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTGTGCAGCCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	107411258	107415872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107412529_107415068
ENSMUSG00000010045.3_107411259_107415872_2	chr9	+	2079	2	FSM	ENSMUSG00000010045.3	ENSMUST00000010189.3	2194	2	115	0	115	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTGTGCAGCCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	107411258	107415872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107412529_107415063
ENSMUSG00000010047.13_107446340_107449978_1	chr9	+	1867	4	NNC	ENSMUSG00000010047.13	novel	2062	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTCTTTTTCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	107446339	107449978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107446433_107447302_107448270_107448690_107448776_107449256
ENSMUSG00000010048.11_107464733_107469361_1	chr9	+	1333	11	ISM	ENSMUSG00000010048.11	ENST00000436390.5	1790	13	19	613	19	-613	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGATGTGTTGGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	107464732	107469361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107464792_107464921_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273
ENSMUSG00000010048.11_107464956_107469687_1	chr9	+	1391	12	FSM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	115	550	115	-287	multi-exon	TRUE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGCCTTCAAAGCCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	107464955	107469687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ENSMUSG00000010048.11_107465068_107469740_1	chr9	+	1332	12	FSM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	227	497	227	-234	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATATCTTGTGAATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	107465067	107469740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ENSMUSG00000010048.11_107465125_107469799_1	chr9	+	1334	12	FSM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	284	438	284	-175	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAGAAGACAGTGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	107465124	107469799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ENSMUSG00000010048.11_107467142_107469907_1	chr9	+	1381	11	ISM	ENSMUSG00000010048.11	ENST00000436390.5	1790	13	2428	67	2301	-67	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACTCAAGCCCTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	107467141	107469907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ENSMUSG00000010054.5_107440550_107443030_1	chr9	+	1288	3	FSM	ENSMUSG00000010054.5	ENSMUST00000010198.5	1665	3	96	281	-19	-281	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTAAGAGAAAGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	107440549	107443030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107440732_107441774_107441896_107442045
ENSMUSG00000010054.5_107440569_107443113_1	chr9	+	1352	3	FSM	ENSMUSG00000010054.5	ENSMUST00000010198.5	1665	3	115	198	0	-198	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTAAATAGTCTAGACT	NA	NA	NA	NA	NA	NA	NA	NA	107440568	107443113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107440732_107441774_107441896_107442045
ENSMUSG00000010054.5_107440671_107443183_1	chr9	+	1320	3	FSM	ENSMUSG00000010054.5	ENSMUST00000010198.5	1665	3	217	128	102	-128	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTCCTTGTGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	107440670	107443183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107440732_107441774_107441896_107442045
ENSMUSG00000010054.5_107441774_107443311_1	chr9	+	1388	2	ISM	ENSMUSG00000010054.5	ENSMUST00000010198.5	1665	3	1320	0	1205	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGAGTGGCGTCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	107441773	107443311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107441896_107442045
ENSMUSG00000010057.9_107419460_107422479_1	chr9	+	1083	10	ISM	ENSMUSG00000010057.9	ENSMUST00000010201.9	1441	11	35	426	35	-426	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGGAGACTACAGAAATATC	NA	NA	NA	NA	NA	NA	NA	NA	107419459	107422479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421834_107421945_107422040_107422112_107422231_107422443
ENSMUSG00000010057.9_107419592_107422521_1	chr9	+	993	10	ISM	ENSMUSG00000010057.9	ENSMUST00000010201.9	1441	11	167	384	167	-384	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGAGCCACCCTGCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	107419591	107422521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421834_107421945_107422040_107422112_107422231_107422443
ENSMUSG00000010057.9_107419631_107422586_1	chr9	+	1019	10	ISM	ENSMUSG00000010057.9	ENSMUST00000010201.9	1441	11	206	319	206	-319	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGGCAGGCAGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	107419630	107422586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421834_107421945_107422040_107422112_107422231_107422443
ENSMUSG00000010057.9_107420235_107422733_1	chr9	+	987	10	ISM	ENSMUSG00000010057.9	ENSMUST00000010201.9	1441	11	810	172	810	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCATCATCTGCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	107420234	107422733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421834_107421945_107422040_107422112_107422231_107422443_107422587_107422689
ENSMUSG00000010057.9_107420459_107422905_2	chr9	+	1029	9	ISM	ENSMUSG00000010057.9	ENSMUST00000010201.9	1441	11	1034	0	1034	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGAGTACTGCTTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	107420458	107422905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421834_107421945_107422040_107422112_107422231_107422443_107422587_107422689
ENSMUSG00000010067.14_107431782_107439462_1	chr9	+	1721	5	NNC	ENSMUSG00000010067.14	novel	1727	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTGGACTCTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	107431781	107439462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107432125_107434657_107434757_107434968_107435267_107435385_107435502_107438597
ENSMUSG00000010067.14_107431782_107439462_2	chr9	+	1721	5	NNC	ENSMUSG00000010067.14	novel	1727	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTGGACTCTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	107431781	107439462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107432125_107434651_107434757_107434968_107435267_107435385_107435496_107438597
ENSMUSG00000010067.14_107431782_107439462_3	chr9	+	1721	5	NNC	ENSMUSG00000010067.14	novel	1727	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTGGACTCTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	107431781	107439462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107432125_107434651_107434757_107434974_107435267_107435385_107435502_107438597
ENSMUSG00000010095.14_8678413_8691066_1	chr19	-	1657	10	NNC	ENSMUSG00000010095.14	novel	1650	9	NA	NA	53	5833	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTTTATCAGAGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	8691066	8678412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_8678472_8685028_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690701
ENSMUSG00000010095.14_8678413_8691066_2	chr19	-	1647	10	NNC	ENSMUSG00000010095.14	novel	1650	9	NA	NA	53	5833	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTTTATCAGAGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	8691066	8678412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_8678462_8685028_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690701
ENSMUSG00000010095.14_8678413_8691243_1	chr19	-	1876	10	NNC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	0	5833	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTTTATCAGAGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	8691243	8678412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_8678462_8684972_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
ENSMUSG00000010095.14_8684981_8691066_1	chr19	-	1643	9	NNC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTGGGTGTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	8691066	8684980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690260_8690696
ENSMUSG00000010095.14_8684981_8691066_2	chr19	-	1637	9	NNC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTGGGTGTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	8691066	8684980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_8685459_8685557_8685633_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690701
ENSMUSG00000010095.14_8684981_8691119_1	chr19	-	1693	9	NNC	ENSMUSG00000010095.14	novel	1650	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2944	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTGGGTGTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	8691119	8684980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_8685459_8685563_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690701
ENSMUSG00000010095.14_8684981_8691119_2	chr19	-	1693	9	NNC	ENSMUSG00000010095.14	novel	1650	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTGGGTGTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	8691119	8684980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_8685459_8685557_8685642_8686368_8686500_8686589_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690701
ENSMUSG00000010095.14_8684981_8691119_3	chr19	-	1693	9	NNC	ENSMUSG00000010095.14	novel	1650	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2078	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTGGGTGTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	8691119	8684980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_8685453_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690701
ENSMUSG00000010095.14_8684981_8691243_1	chr19	-	1817	9	NNC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTGGGTGTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	8691243	8684980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_8685453_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690701
ENSMUSG00000010095.14_8684981_8691243_2	chr19	-	1815	9	NNC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3995	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTGGGTGTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	8691243	8684980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690260_8690701
ENSMUSG00000010095.14_8684981_8691243_3	chr19	-	1817	9	NNC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTGGGTGTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	8691243	8684980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_8685459_8685563_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690701
ENSMUSG00000010095.14_8685127_8686436_1	chr19	-	484	3	ISM	ENSMUSG00000010095.14	ENSMUST00000206598.2	1393	8	3913	176	3913	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGAGGGCTTGCTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	8686436	8685126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_8685459_8685557_8685642_8686368
ENSMUSG00000010095.14_8685276_8686661_1	chr19	-	476	4	ISM	ENSMUSG00000010095.14	ENSMUST00000206598.2	1393	8	3688	325	3688	-246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGCCGGTCAGCCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	8686661	8685275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593
ENSMUSG00000010095.14_8685392_8686754_1	chr19	-	453	4	ISM	ENSMUSG00000010095.14	ENSMUST00000206598.2	1393	8	3595	441	3595	-362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCTCTCTGTTGCACGGT	NA	NA	NA	NA	NA	NA	NA	NA	8686754	8685391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593
ENSMUSG00000010097.16_8734514_8743863_1	chr19	+	2563	10	ISM	ENSMUSG00000010097.16	ENSMUST00000184970.9	4042	20	43	4408	0	1208	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGCAAGGTGGGGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	8734513	8743863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285
ENSMUSG00000010097.16_8734514_8744796_1	chr19	+	1323	14	ISM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	77	3490	0	2141	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCGCTAAGCATTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	8734513	8744796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730
ENSMUSG00000010097.16_8734514_8744989_1	chr19	+	1418	15	ISM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	77	3297	0	2334	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAGTAAGTACATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	8734513	8744989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936
ENSMUSG00000010097.16_8739676_8745251_1	chr19	+	1472	15	ISM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	5239	3035	5162	2596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAATGGGCTCAGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	8739675	8745251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093
ENSMUSG00000010097.16_8739773_8744009_1	chr19	+	2502	9	ISM	ENSMUSG00000010097.16	ENST00000531709.6	4045	20	5290	4273	5259	1354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGTCCCCATGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	8739772	8744009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285
ENSMUSG00000010097.16_8739824_8745973_1	chr19	+	1346	17	ISM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	5387	2313	5310	-2298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACGTGCTTTCACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	8739823	8745973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952
ENSMUSG00000010097.16_8740047_8744197_1	chr19	+	2603	8	ISM	ENSMUSG00000010097.16	ENST00000531709.6	4045	20	5564	4085	5533	1542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTAACATTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	8740046	8744197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285
ENSMUSG00000010097.16_8740129_8746418_1	chr19	+	1334	17	ISM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	5692	1868	5615	-1853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGAGCCTTCGCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	8740128	8746418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364
ENSMUSG00000010097.16_8740145_8746426_1	chr19	+	1321	17	NNC	ENSMUSG00000010097.16	novel	2407	21	NA	NA	5631	-1845	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCGCCATGTCTGCACCC	NA	NA	NA	NA	NA	NA	NA	NA	8740144	8746426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744596_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364
ENSMUSG00000010097.16_8740179_8746531_1	chr19	+	1397	17	ISM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	5742	1755	5665	-1740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTGGTCTCAGAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	8740178	8746531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364
ENSMUSG00000010097.16_8741059_8744838_1	chr19	+	2600	9	ISM	ENSMUSG00000010097.16	ENST00000531709.6	4045	20	6576	3444	6545	2183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGTCACATGTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	8741058	8744838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744513_8744591_8744648_8744730
ENSMUSG00000010097.16_8741108_8747958_1	chr19	+	1342	17	ISM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	6671	328	6594	-313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCGTTTATGAAATGATC	NA	NA	NA	NA	NA	NA	NA	NA	8741107	8747958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ENSMUSG00000010097.16_8741305_8748020_1	chr19	+	1321	16	ISM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	6868	266	6791	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGTCATCTGCCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	8741304	8748020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ENSMUSG00000010097.16_8741346_8748086_1	chr19	+	1346	16	ISM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	6909	200	6832	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTCATCCTCCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	8741345	8748086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ENSMUSG00000010097.16_8741442_8745251_1	chr19	+	2631	9	ISM	ENSMUSG00000010097.16	ENST00000531709.6	4045	20	6959	3031	6928	2596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAATGGGCTCAGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	8741441	8745251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093
ENSMUSG00000010097.16_8741442_8748213_1	chr19	+	1460	15	ISM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	7005	73	6928	-58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTCTGTGTACTTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	8741441	8748213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ENSMUSG00000010097.16_8742627_8748213_1	chr19	+	2615	11	ISM	ENSMUSG00000010097.16	ENST00000531709.6	4045	20	8144	69	8113	-58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTCTGTGTACTTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	8742626	8748213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ENSMUSG00000010097.16_8742718_8748213_1	chr19	+	2524	11	ISM	ENSMUSG00000010097.16	ENST00000531709.6	4045	20	8235	69	8204	-58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTCTGTGTACTTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	8742717	8748213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ENSMUSG00000010097.16_8742785_8748271_1	chr19	+	2515	11	ISM	ENSMUSG00000010097.16	ENST00000531709.6	4045	20	8302	11	8271	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTGTGTCCCATTACT	NA	NA	NA	NA	NA	NA	NA	NA	8742784	8748271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ENSMUSG00000010110.18_8718876_8733433_1	chr19	+	2152	11	FSM	ENSMUSG00000010110.18	ENSMUST00000176381.8	2251	11	99	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGGAAGCAGGTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	8718875	8733433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_8718940_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ENSMUSG00000010154.8_124059452_124086904_1	chr8	+	1441	9	ISM	ENSMUSG00000010154.8	ENST00000393062.6	2162	13	-25	9336	0	-9336	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTCAGTCAGCCGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	124059451	124086904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124059775_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811
ENSMUSG00000010154.8_124059644_124088009_1	chr8	+	1367	10	ISM	ENSMUSG00000010154.8	ENST00000393062.6	2162	13	167	8231	167	-8231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCAGCCTCTCCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	124059643	124088009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124059775_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988
ENSMUSG00000010154.8_124059708_124088053_1	chr8	+	1347	10	ISM	ENSMUSG00000010154.8	ENST00000393062.6	2162	13	231	8187	231	-8187	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGATGGACCTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	124059707	124088053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124059775_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988
ENSMUSG00000010154.8_124073379_124089810_1	chr8	+	1384	10	ISM	ENSMUSG00000010154.8	ENST00000393062.6	2162	13	13902	6430	-3611	-6430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCGCAGGGTGCTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	124073378	124089810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757
ENSMUSG00000010154.8_124080777_124090079_1	chr8	+	1421	10	ISM	ENSMUSG00000010154.8	ENSMUST00000212404.2	2158	14	3787	6175	3787	-6161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGTTTCCCCTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	124080776	124090079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061
ENSMUSG00000010154.8_124080911_124095442_1	chr8	+	1392	11	ISM	ENSMUSG00000010154.8	ENST00000378247.8	2332	14	21434	823	3921	-798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATCCCTGTCTACACAC	NA	NA	NA	NA	NA	NA	NA	NA	124080910	124095442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090140_124095397
ENSMUSG00000010154.8_124081057_124095982_1	chr8	+	1408	12	ISM	ENSMUSG00000010154.8	ENST00000378247.8	2332	14	21580	283	4067	-258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATGTCTGCAGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	124081056	124095982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090140_124095397_124095533_124095910
ENSMUSG00000010154.8_124083544_124096147_1	chr8	+	1346	10	ISM	ENSMUSG00000010154.8	ENST00000378247.8	2332	14	24067	118	6554	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCACACCCCATCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	124083543	124096147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090140_124095397_124095533_124095910
ENSMUSG00000010154.8_124084381_124096265_1	chr8	+	1391	9	ISM	ENSMUSG00000010154.8	ENST00000378247.8	2332	14	24904	0	7391	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCCCTACAGTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	124084380	124096265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090140_124095397_124095533_124095910
ENSMUSG00000010154.8_124086878_124096093_1	chr8	+	626	5	ISM	ENSMUSG00000010154.8	ENST00000393062.6	2162	13	27401	147	9888	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTATATCCCCAACACCA	NA	NA	NA	NA	NA	NA	NA	NA	124086877	124096093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124095910
ENSMUSG00000010154.8_124086935_124096149_1	chr8	+	625	5	ISM	ENSMUSG00000010154.8	ENST00000393062.6	2162	13	27458	91	9945	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACACCCCATCCTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	124086934	124096149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124095910
ENSMUSG00000010154.8_124087994_124096254_1	chr8	+	658	4	ISM	ENSMUSG00000010154.8	ENST00000393062.6	2162	13	28517	-14	11004	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACATTGTCTCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	124087993	124096254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124088105_124089757_124089893_124090061_124090130_124095910
ENSMUSG00000010307.8_46700349_46703176_1	chr7	+	482	3	FSM	ENSMUSG00000010307.8	ENSMUST00000010451.8	1831	3	0	1349	0	-1349	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGCACACATCCTCTACG	NA	NA	NA	NA	NA	NA	NA	NA	46700348	46703176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_46700550_46702597_46702863_46703160
ENSMUSG00000010307.8_46702597_46703407_1	chr7	+	513	2	ISM	ENSMUSG00000010307.8	ENSMUST00000010451.8	1831	3	2248	1118	2248	-1118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCGGTGGTGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	46702596	46703407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_46702863_46703160
ENSMUSG00000010358.14_101339396_101348348_1	chr11	+	407	4	ISM	ENSMUSG00000010358.14	ENST00000438323.2	1064	7	162	871	162	-871	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAGAGTGGCAGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	101339395	101348348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101339449_101347391_101347491_101348015_101348164_101348241
ENSMUSG00000010358.14_101347402_101348534_1	chr11	+	433	4	ISM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	8169	990	8168	-685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATCTTCTTTGGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	101347401	101348534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101347491_101348015_101348164_101348241_101348349_101348445
ENSMUSG00000010358.14_101348075_101348796_1	chr11	+	463	4	ISM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	8842	728	8841	-423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGGTGAGATCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	101348074	101348796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101348164_101348241_101348349_101348445_101348633_101348716
ENSMUSG00000010358.14_101348267_101349112_1	chr11	+	462	4	ISM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	9034	412	9033	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCACTTCCAGAAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	101348266	101349112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101348349_101348445_101348633_101348716_101348824_101349026
ENSMUSG00000010358.14_101348338_101349154_1	chr11	+	433	4	ISM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	9105	370	9104	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGACAGTTGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	101348337	101349154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101348349_101348445_101348633_101348716_101348824_101349026
ENSMUSG00000010358.14_101348568_101349290_1	chr11	+	436	3	ISM	ENSMUSG00000010358.14	ENST00000438323.2	1064	7	9334	-71	9334	71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTGTGATGGTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	101348567	101349290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101348633_101348716_101348824_101349026
ENSMUSG00000010362.10_101518768_101526650_1	chr11	+	848	7	FSM	ENSMUSG00000010362.10	ENSMUST00000010506.10	1124	7	0	276	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGCTGTGTGATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	101518767	101526650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101518891_101519098_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
ENSMUSG00000010362.10_101519092_101526650_1	chr11	+	387	3	FSM	ENSMUSG00000010362.10	ENST00000617591.4	387	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGCTGTGTGATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	101519091	101526650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101519279_101521063_101521187_101526573
ENSMUSG00000010362.10_101519092_101526650_2	chr11	+	381	3	NNC	ENSMUSG00000010362.10	novel	387	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGCTGTGTGATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	101519091	101526650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_101519273_101521063_101521187_101526573
ENSMUSG00000010362.10_101519092_101526650_3	chr11	+	382	3	NIC	ENSMUSG00000010362.10	novel	731	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGCTGTGTGATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	101519091	101526650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_101519279_101521063_101521187_101526578
ENSMUSG00000010362.10_101519092_101526650_4	chr11	+	727	6	NIC	ENSMUSG00000010362.10	novel	731	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGCTGTGTGATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	101519091	101526650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526578
ENSMUSG00000010362.10_101519092_101526786_1	chr11	+	868	6	ISM	ENSMUSG00000010362.10	ENSMUST00000010506.10	1124	7	324	140	0	136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATCTTGCTGGGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	101519091	101526786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
ENSMUSG00000010362.10_101519215_101526926_1	chr11	+	885	6	ISM	ENSMUSG00000010362.10	ENSMUST00000010506.10	1124	7	447	0	123	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGGTTTGGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	101519214	101526926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
ENSMUSG00000010376.16_55899989_55900941_1	chr14	-	164	2	ISM	ENSMUSG00000010376.16	ENSMUST00000163750.8	514	5	8389	267	8389	-267	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAAACTTGGTTCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	55900941	55899988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55900083_55900871
ENSMUSG00000010392.9_76620689_76645626_1	chr11	-	847	7	ISM	ENSMUSG00000010392.9	ENST00000225724.9	857	8	3	9121	3	-3261	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	805	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCAGGCAGAAGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	76645626	76620688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538
ENSMUSG00000010392.9_76620689_76645628_2	chr11	-	838	6	NNC	ENSMUSG00000010392.9	novel	857	8	NA	NA	1	-3261	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCAGGCAGAAGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	76645628	76620688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_76621060_76625394_76625497_76639333_76639409_76641636_76641729_76645194_76645303_76645538
ENSMUSG00000010392.9_76620689_76645628_3	chr11	-	842	7	NNC	ENSMUSG00000010392.9	novel	857	8	NA	NA	1	-3261	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCAGGCAGAAGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	76645628	76620688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645296_76645538
ENSMUSG00000010406.13_54664366_54667213_1	chr14	+	413	5	NNC	ENSMUSG00000010406.13	novel	418	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2094	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTGGCTTTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	54664365	54667213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_54664413_54664490_54664549_54664627_54664696_54666040_54666106_54667038
ENSMUSG00000010406.13_54664366_54667213_2	chr14	+	412	5	NNC	ENSMUSG00000010406.13	novel	418	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTGGCTTTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	54664365	54667213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_54664422_54664500_54664549_54664627_54664696_54666040_54666106_54667038
ENSMUSG00000010406.13_54664366_54667213_3	chr14	+	411	5	NNC	ENSMUSG00000010406.13	novel	418	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTGGCTTTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	54664365	54667213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_54664418_54664490_54664549_54664627_54664696_54666040_54666106_54667045
ENSMUSG00000010406.13_54664387_54666105_1	chr14	+	295	3	ISM	ENSMUSG00000010406.13	ENSMUST00000199195.3	463	4	0	1101	0	-1101	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTAGCTGGGACTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	54664386	54666105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54664549_54664627_54664696_54666040
ENSMUSG00000010406.13_54664497_54667213_1	chr14	+	355	4	NNC	ENSMUSG00000010406.13	novel	418	5	NA	NA	110	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTGGCTTTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	54664496	54667213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_54664549_54664632_54664696_54666040_54666106_54667038
ENSMUSG00000010461.17_22981368_22987478_1	chr10	-	941	3	ISM	ENSMUSG00000010461.17	ENST00000531901.5	2600	17	61546	3	61546	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATACAAAATCAAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	22987478	22981367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_22982188_22985730_22985832_22987458
ENSMUSG00000010461.17_22981485_22987530_1	chr10	-	876	3	ISM	ENSMUSG00000010461.17	ENST00000531901.5	2600	17	61494	120	61494	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTCTTTTATAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	22987530	22981484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_22982188_22985730_22985832_22987458
ENSMUSG00000010461.17_22981663_22992488_1	chr10	-	901	5	ISM	ENSMUSG00000010461.17	ENST00000531901.5	2600	17	56536	298	56536	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAATCGGAATGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	22992488	22981662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_22982188_22985730_22985832_22987458_22987581_22989808_22989924_22992450
ENSMUSG00000010461.17_22981738_22992541_1	chr10	-	879	5	ISM	ENSMUSG00000010461.17	ENST00000531901.5	2600	17	56483	373	56483	266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATTCCTCAAAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	22992541	22981737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_22982188_22985730_22985832_22987458_22987581_22989808_22989924_22992450
ENSMUSG00000010461.17_22981877_22992776_1	chr10	-	869	6	ISM	ENSMUSG00000010461.17	ENST00000531901.5	2600	17	56248	512	56248	127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAACATAATAATAACA	NA	NA	NA	NA	NA	NA	NA	NA	22992776	22981876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_22982188_22985730_22985832_22987458_22987581_22989808_22989924_22992450_22992612_22992717
ENSMUSG00000010461.17_22982004_23014172_1	chr10	-	916	8	ISM	ENSMUSG00000010461.17	ENST00000531901.5	2600	17	34852	639	34852	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGGATGAAATCATACTC	NA	NA	NA	NA	NA	NA	NA	NA	23014172	22982003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_22982188_22985730_22985832_22987458_22987581_22989808_22989924_22992450_22992612_22992717_22992777_22999749_22999840_23014088
ENSMUSG00000010461.17_22982004_23049024_1	chr10	-	1780	15	NNC	ENSMUSG00000010461.17	novel	1781	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	932	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGGATGAAATCATACTC	NA	NA	NA	NA	NA	NA	NA	NA	23049024	22982003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_22982188_22985869_22985971_22987458_22987581_22989808_22989924_22992450_22992612_22992717_22992777_22999749_22999840_23014088_23014173_23015858_23015996_23027829_23027996_23031817_23031898_23033149_23033294_23033409_23033553_23034985_23035053_23048897
ENSMUSG00000010461.17_22982004_23049024_2	chr10	-	1781	15	FSM	ENSMUSG00000010461.17	ENST00000452339.6	1781	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGGATGAAATCATACTC	NA	NA	NA	NA	NA	NA	NA	NA	23049024	22982003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_22982188_22985869_22985971_22987458_22987581_22989808_22989924_22992450_22992612_22992717_22992777_22999749_22999840_23014088_23014173_23015858_23015996_23027829_23027996_23031817_23031898_23033149_23033294_23033409_23033553_23034985_23035053_23048896
ENSMUSG00000010461.17_22982004_23049024_3	chr10	-	1774	15	NNC	ENSMUSG00000010461.17	novel	1781	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGGATGAAATCATACTC	NA	NA	NA	NA	NA	NA	NA	NA	23049024	22982003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_22982188_22985869_22985971_22987458_22987581_22989808_22989924_22992450_22992612_22992717_22992777_22999749_22999840_23014088_23014173_23015858_23015996_23027829_23027996_23031817_23031891_23033149_23033294_23033409_23033553_23034985_23035053_23048896
ENSMUSG00000010461.17_22982004_23049024_4	chr10	-	1776	15	NNC	ENSMUSG00000010461.17	novel	1781	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGGATGAAATCATACTC	NA	NA	NA	NA	NA	NA	NA	NA	23049024	22982003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_22982188_22985869_22985966_22987458_22987581_22989808_22989924_22992450_22992612_22992717_22992777_22999749_22999840_23014088_23014173_23015858_23015996_23027829_23027996_23031817_23031898_23033149_23033294_23033409_23033553_23034985_23035053_23048896
ENSMUSG00000010461.17_22982128_23015936_1	chr10	-	870	9	ISM	ENSMUSG00000010461.17	ENST00000531901.5	2600	17	33088	763	33088	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATTAGAGTATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	23015936	22982127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_22982188_22985730_22985832_22987458_22987581_22989808_22989924_22992450_22992612_22992717_22992777_22999749_22999840_23014088_23014173_23015858
ENSMUSG00000010461.17_22985783_23027881_1	chr10	-	887	9	ISM	ENSMUSG00000010461.17	ENST00000531901.5	2600	17	21143	4418	21143	-3779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTATGTTGTAATTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	23027881	22985782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_22985832_22987458_22987581_22989808_22989924_22992450_22992612_22992717_22992777_22999749_22999840_23014088_23014173_23015858_23015996_23027811
ENSMUSG00000010461.17_22989886_23033201_1	chr10	-	885	9	ISM	ENSMUSG00000010461.17	ENST00000531901.5	2600	17	15823	8521	15823	-7882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGGCAGAGATCGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	23033201	22989885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_22989924_22992450_22992612_22992717_22992777_22999749_22999840_23014088_23014173_23015858_23015996_23027811_23027996_23031817_23031898_23033149
ENSMUSG00000010461.17_22992571_23033437_1	chr10	-	847	9	ISM	ENSMUSG00000010461.17	ENST00000531901.5	2600	17	15587	11206	15587	-10567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGCGAACCTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	23033437	22992570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_22992612_22992717_22992777_22999749_22999840_23014088_23014173_23015858_23015996_23027811_23027996_23031817_23031898_23033149_23033294_23033409
ENSMUSG00000010461.17_22999749_23035054_1	chr10	-	932	8	ISM	ENSMUSG00000010461.17	ENST00000531901.5	2600	17	13970	18384	13970	-17745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAATTTTAAAAGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	23035054	22999748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_22999840_23014088_23014173_23015858_23015996_23027811_23027996_23031817_23031898_23033149_23033294_23033409_23033553_23034985
ENSMUSG00000010461.17_23014088_23039384_1	chr10	-	933	8	ISM	ENSMUSG00000010461.17	ENST00000531901.5	2600	17	9640	32723	9640	-32084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAGCCAAGAGCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	23039384	23014087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_23014173_23015858_23015996_23027811_23027996_23031817_23031898_23033149_23033294_23033409_23033553_23034985_23035053_23039291
ENSMUSG00000010461.17_23015939_23048941_1	chr10	-	882	9	ISM	ENSMUSG00000010461.17	ENST00000531901.5	2600	17	83	34574	83	-33935	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAGAAGTTCTGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	23048941	23015938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_23015996_23027811_23027996_23031817_23031898_23033149_23033294_23033409_23033553_23034985_23035053_23039291_23039385_23047523_23047593_23048896
ENSMUSG00000010476.15_136799216_136802182_1	chr7	-	515	4	ISM	ENSMUSG00000010476.15	ENST00000440978.2	5109	17	113975	3806	67085	-1603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCGGTGGTATATTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	136802182	136799215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_136799273_136800220_136800419_136800822_136801012_136802111
ENSMUSG00000010476.15_136827534_136914102_1	chr7	-	477	6	ISM	ENSMUSG00000010476.15	ENSMUST00000210774.2	2994	16	1613	30564	1613	-29921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGACGGTCTACAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	136914102	136827533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_136827616_136832892_136833038_136837635_136837718_136909213_136909283_136911027_136911102_136914077
ENSMUSG00000010476.15_136915281_136915861_1	chr7	-	476	2	ISM	ENSMUSG00000010476.15	ENSMUST00000210774.2	2994	16	-146	118311	-146	-117668	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGCTTTTGTGGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	136915861	136915280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_136915404_136915508
ENSMUSG00000010476.15_136915339_136915917_1	chr7	-	474	2	ISM	ENSMUSG00000010476.15	ENSMUST00000210774.2	2994	16	-202	118369	-202	-117726	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCACTTCGTGCTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	136915917	136915338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_136915404_136915508
ENSMUSG00000010505.17_181432342_181446902_1	chr2	+	865	7	ISM	ENSMUSG00000010505.17	ENST00000360149.9	1723	13	2	10568	2	-10568	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAGCGAAACCTCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	181432341	181446902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181432373_181436558_181436622_181437439_181437688_181442809_181442945_181443607_181443699_181444708_181444823_181446719
ENSMUSG00000010505.17_181436556_181448332_1	chr2	+	893	7	ISM	ENSMUSG00000010505.17	ENST00000360149.9	1723	13	4216	9138	4216	-9138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGCACACATGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	181436555	181448332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181436622_181437439_181437688_181442809_181442945_181443607_181443699_181444708_181444823_181446719_181446935_181448308
ENSMUSG00000010505.17_181437524_181449216_1	chr2	+	877	7	ISM	ENSMUSG00000010505.17	ENST00000360149.9	1723	13	5184	8254	5184	-8254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGACTTGAGCATGCATAA	NA	NA	NA	NA	NA	NA	NA	NA	181437523	181449216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181437688_181442809_181442945_181443607_181443699_181444708_181444823_181446719_181446935_181448308_181448434_181449183
ENSMUSG00000010505.17_181437590_181449252_1	chr2	+	847	7	ISM	ENSMUSG00000010505.17	ENST00000360149.9	1723	13	5250	8218	5250	-8218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTTCCCCAGCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	181437589	181449252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181437688_181442809_181442945_181443607_181443699_181444708_181444823_181446719_181446935_181448308_181448434_181449183
ENSMUSG00000010505.17_181437636_181449308_1	chr2	+	857	7	ISM	ENSMUSG00000010505.17	ENST00000360149.9	1723	13	5296	8162	5296	-8162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTCAACGTCAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	181437635	181449308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181437688_181442809_181442945_181443607_181443699_181444708_181444823_181446719_181446935_181448308_181448434_181449183
ENSMUSG00000010505.17_181442808_181449453_1	chr2	+	952	6	ISM	ENSMUSG00000010505.17	ENST00000360149.9	1723	13	10468	8017	10468	-8017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGCCAGGGGCCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	181442807	181449453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181442945_181443607_181443699_181444708_181444823_181446719_181446935_181448308_181448434_181449183
ENSMUSG00000010505.17_181442914_181452067_1	chr2	+	876	7	ISM	ENSMUSG00000010505.17	ENST00000360149.9	1723	13	10574	5403	10574	-5403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAAGCAGATGATCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	181442913	181452067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181442945_181443607_181443699_181444708_181444823_181446719_181446935_181448308_181448434_181449183_181449454_181452037
ENSMUSG00000010505.17_181443608_181452192_1	chr2	+	970	6	ISM	ENSMUSG00000010505.17	ENST00000360149.9	1723	13	11268	5278	11268	-5278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGATGCCTTGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	181443607	181452192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181443699_181444708_181444823_181446719_181446935_181448308_181448434_181449183_181449454_181452037
ENSMUSG00000010505.17_181444707_181453020_1	chr2	+	944	6	ISM	ENSMUSG00000010505.17	ENST00000360149.9	1723	13	12367	4450	12367	-4450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCGTGCCCTGCTCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	181444706	181453020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181444823_181446719_181446935_181448308_181448434_181449183_181449454_181452037_181452193_181452957
ENSMUSG00000010505.17_181444799_181456859_1	chr2	+	870	7	ISM	ENSMUSG00000010505.17	ENST00000360149.9	1723	13	12459	611	12459	-611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGCTCTGGCCACATAA	NA	NA	NA	NA	NA	NA	NA	NA	181444798	181456859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181444823_181446719_181446935_181448308_181448434_181449183_181449454_181452037_181452193_181452957_181453021_181456841
ENSMUSG00000010505.17_181446804_181457470_1	chr2	+	955	7	ISM	ENSMUSG00000010505.17	ENST00000360149.9	1723	13	14464	0	14464	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAACTAAACAACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	181446803	181457470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181446935_181448308_181448434_181449183_181449454_181452037_181452193_181452957_181453021_181456841_181456905_181457322
ENSMUSG00000010517.8_109533937_109568031_1	chr4	+	378	2	ISM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	152	253126	152	-253126	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAAAATAACTGGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	109533936	109568031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_109534270_109567986
ENSMUSG00000010517.8_109534194_109584789_1	chr4	+	395	4	ISM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	409	236368	409	-236368	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATTACCCTCATAAG	NA	NA	NA	NA	NA	NA	NA	NA	109534193	109584789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586
ENSMUSG00000010517.8_109534194_109820948_1	chr4	+	3687	20	FSM	ENSMUSG00000010517.8	ENST00000396153.7	4728	20	412	629	409	-209	multi-exon	FALSE	canonical	NA	NA	NA	NA	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACTTAAACCACAGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	109534193	109820948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995_109819967_109820129
ENSMUSG00000010517.8_109534194_109821006_1	chr4	+	3745	20	FSM	ENSMUSG00000010517.8	ENST00000396153.7	4728	20	412	571	409	-151	multi-exon	FALSE	canonical	NA	NA	NA	NA	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCGAGTTCTCATGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	109534193	109821006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995_109819967_109820129
ENSMUSG00000010517.8_109567981_109821157_1	chr4	+	3826	19	ISM	ENSMUSG00000010517.8	ENST00000396153.7	4728	20	34199	420	34196	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAGTTGAAAAGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	109567980	109821157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995_109819967_109820129
ENSMUSG00000010517.8_109593791_109821307_1	chr4	+	3648	16	ISM	ENSMUSG00000010517.8	ENST00000396153.7	4728	20	60009	270	60006	150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGACTCTCTCACTACA	NA	NA	NA	NA	NA	NA	NA	NA	109593790	109821307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995_109819967_109820129
ENSMUSG00000010517.8_109593827_109821397_1	chr4	+	3702	16	ISM	ENSMUSG00000010517.8	ENST00000396153.7	4728	20	60045	180	60042	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGAGGTCATCAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	109593826	109821397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995_109819967_109820129
ENSMUSG00000010608.16_83679100_83708001_1	chr12	+	992	10	ISM	ENSMUSG00000010608.16	ENST00000526754.5	1553	11	65	847	65	-847	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGAAACTCTCAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	83679099	83708001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980
ENSMUSG00000010608.16_83689413_83708476_1	chr12	+	1014	10	ISM	ENSMUSG00000010608.16	ENST00000526754.5	1553	11	10378	372	10378	-372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAGATGTGTCTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	83689412	83708476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83708393
ENSMUSG00000010608.16_83689473_83708541_1	chr12	+	1019	10	ISM	ENSMUSG00000010608.16	ENST00000526754.5	1553	11	10438	307	10438	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAAGTCATAGTAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	83689472	83708541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83708393
ENSMUSG00000010608.16_83692956_83710929_1	chr12	+	840	7	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	13930	18968	13921	2081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGATCGTGACCGCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	83692955	83710929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752
ENSMUSG00000010608.16_83694972_83708849_1	chr12	+	1058	7	ISM	ENSMUSG00000010608.16	ENST00000526754.5	1553	11	15937	-1	15937	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTTCTCTTTGGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	83694971	83708849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83708393
ENSMUSG00000010608.16_83698095_83714955_1	chr12	+	819	6	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	19069	14942	19060	6107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAGAACGGGAACGGG	NA	NA	NA	NA	NA	NA	NA	NA	83698094	83714955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865
ENSMUSG00000010608.16_83698157_83715018_1	chr12	+	820	6	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	19131	14879	19122	6170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGCATATGAACGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	83698156	83715018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865
ENSMUSG00000010608.16_83698197_83715082_1	chr12	+	844	6	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	19171	14815	19162	6234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACTGAGGAAATGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83698196	83715082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865
ENSMUSG00000010608.16_83706196_83715282_1	chr12	+	913	6	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	27170	14615	27161	6434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGATTTTAGGTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	83706195	83715282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192
ENSMUSG00000010608.16_83706317_83718708_1	chr12	+	819	7	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	27291	11189	27282	9860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTAGAAGATTATGATGA	NA	NA	NA	NA	NA	NA	NA	NA	83706316	83718708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681
ENSMUSG00000010608.16_83707381_83719597_1	chr12	+	824	6	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	28355	10300	28346	-10300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATCAGGCAGCGCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	83707380	83719597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507
ENSMUSG00000010608.16_83710826_83721210_1	chr12	+	838	6	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	31800	8687	31791	-8687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAGCCTGTGGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	83710825	83721210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112
ENSMUSG00000010608.16_83710928_83721277_1	chr12	+	803	6	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	31902	8620	31893	-8620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGCTCTGCCCCATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	83710927	83721277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112
ENSMUSG00000010608.16_83710971_83721364_1	chr12	+	847	6	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	31945	8533	31936	-8533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCATGAAAACTCACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	83710970	83721364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112
ENSMUSG00000010608.16_83714948_83721837_1	chr12	+	795	6	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	35922	8060	35913	-8060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCTAATTCAGTGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	83714947	83721837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817
ENSMUSG00000010608.16_83715032_83721981_1	chr12	+	855	6	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	36006	7916	35997	-7916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGTAAACACTGAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	83715031	83721981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817
ENSMUSG00000010608.16_83719522_83722954_1	chr12	+	836	4	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	40496	6943	40487	-6943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTCTTTTTCTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	83719521	83722954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83719659_83721112_83721438_83721817_83722093_83722855
ENSMUSG00000010608.16_83719627_83724676_1	chr12	+	779	5	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	40601	5221	40592	-5221	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTTAGAAGAACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	83719626	83724676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628
ENSMUSG00000010608.16_83721299_83728584_1	chr12	+	869	5	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	42273	1313	42264	-1313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTACTGGTGTGTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	83721298	83728584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ENSMUSG00000010608.16_83721984_83728824_1	chr12	+	804	4	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	42958	1073	42949	-1073	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTAAAATTAGAGTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	83721983	83728824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83722093_83722855_83722955_83724628_83724677_83728276
ENSMUSG00000010608.16_83722891_83728965_1	chr12	+	801	3	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	43865	932	43856	-932	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCACACATAAAGGAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	83722890	83728965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83722955_83724628_83724677_83728276
ENSMUSG00000010609.16_180055241_180062585_1	chr1	-	390	5	ISM	ENSMUSG00000010609.16	ENST00000678320.1	1805	9	10734	660	10734	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCCATCTCCATCACCT	NA	NA	NA	NA	NA	NA	NA	NA	180062585	180055240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180055294_180056407_180056527_180056950_180057053_180057406_180057491_180062553
ENSMUSG00000010609.16_180056441_180062695_1	chr1	-	414	4	ISM	ENSMUSG00000010609.16	ENST00000678320.1	1805	9	10624	1860	10624	-1431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACGCTGGCCTGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	180062695	180056440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180056527_180056950_180057053_180057406_180057491_180062553
ENSMUSG00000010660.4_118900595_118905063_1	chr9	-	1988	11	ISM	ENSMUSG00000010660.4	ENSMUST00000214470.2	2706	15	12266	0	12266	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCTAGTCTCTTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	118905063	118900594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831
ENSMUSG00000010660.4_118900828_118910035_1	chr9	-	1931	13	ISM	ENSMUSG00000010660.4	ENSMUST00000214470.2	2706	15	7294	233	7294	-233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCACACCTGTCTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	118910035	118900827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989
ENSMUSG00000010660.4_118900900_118910073_1	chr9	-	1897	13	ISM	ENSMUSG00000010660.4	ENSMUST00000214470.2	2706	15	7256	305	7256	-305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGTGAAGATCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	118910073	118900899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989
ENSMUSG00000010660.4_118900920_118910163_1	chr9	-	1967	13	ISM	ENSMUSG00000010660.4	ENSMUST00000214470.2	2706	15	7166	325	7166	-325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCATCCATCAGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	118910163	118900919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989
ENSMUSG00000010660.4_118901195_118913686_1	chr9	-	1911	13	ISM	ENSMUSG00000010660.4	ENSMUST00000214470.2	2706	15	3643	600	3643	-600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACCTTGCCCTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	118913686	118901194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657
ENSMUSG00000010660.4_118901316_118913822_1	chr9	-	2003	12	ISM	ENSMUSG00000010660.4	ENSMUST00000214470.2	2706	15	3507	721	3507	-721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATGCATTGGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	118913822	118901315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657
ENSMUSG00000010660.4_118901543_118922570_1	chr9	-	2013	12	ISM	ENSMUSG00000010660.4	ENSMUST00000010804.4	2657	15	0	948	0	-948	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCCTGATACAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	118922570	118901542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118922425
ENSMUSG00000010660.4_118901647_118922570_1	chr9	-	1909	12	ISM	ENSMUSG00000010660.4	ENSMUST00000010804.4	2657	15	0	1052	0	-1052	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTGAAACCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	118922570	118901646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118922425
ENSMUSG00000010663.6_10160252_10174241_1	chr19	+	3457	12	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTATTCATTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	10160251	10174241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_10160629_10162290_10162402_10163048_10163241_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ENSMUSG00000010663.6_10160252_10174241_2	chr19	+	3457	12	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTATTCATTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	10160251	10174241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163747_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ENSMUSG00000010663.6_10160252_10174241_3	chr19	+	3458	12	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTATTCATTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	10160251	10174241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171974_10172234
ENSMUSG00000010663.6_10160252_10174241_4	chr19	+	3458	12	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTATTCATTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	10160251	10174241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171158_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ENSMUSG00000010663.6_10160252_10174241_5	chr19	+	3457	12	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTATTCATTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	10160251	10174241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171687_10171762_10171852_10171979_10172234
ENSMUSG00000010755.18_143111170_143112905_1	chr7	-	615	2	ISM	ENSMUSG00000010755.18	ENSMUST00000010899.14	3222	23	40922	203	27346	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCAGAGCAACTGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	143112905	143111169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143111744_143112864
ENSMUSG00000010755.18_143111308_143115655_1	chr7	-	640	4	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	38138	-136	24596	136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTAATCTCTGCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	143115655	143111307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595
ENSMUSG00000010755.18_143111444_143118802_1	chr7	-	675	6	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	34991	0	21449	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	143118802	143111443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720
ENSMUSG00000010755.18_143122747_143125288_1	chr7	-	642	6	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	28505	11303	14963	5510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAAGGCTGAACGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	143125288	143122746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220
ENSMUSG00000010755.18_143123137_143128346_1	chr7	-	671	6	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	25447	11693	11905	5120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGGAGCTTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	143128346	143123136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249
ENSMUSG00000010755.18_143125263_143139483_1	chr7	-	621	6	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	14310	13819	768	2994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCCAGGCGAGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	143139483	143125262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435
ENSMUSG00000010755.18_143128257_143138478_1	chr7	-	439	4	ISM	ENSMUSG00000010755.18	ENST00000603171.1	673	6	1773	0	1773	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAGGTAAGAGCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	143138478	143128256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143128372_143129654_143129744_143130322_143130464_143138384
ENSMUSG00000010755.18_143129655_143139515_1	chr7	-	460	4	ISM	ENSMUSG00000010755.18	ENST00000603171.1	673	6	736	1398	736	-1398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCATGAGAAACCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	143139515	143129654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143129744_143130322_143130464_143138384_143138535_143139435
ENSMUSG00000010755.18_143138468_143146328_1	chr7	-	624	6	ISM	ENSMUSG00000010755.18	ENSMUST00000010899.14	3222	23	7499	27501	-6077	-10211	internal_fragment	TRUE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGTGAAACTTGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	143146328	143138467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148
ENSMUSG00000010803.14_42021926_42026367_1	chr11	-	2825	2	ISM	ENSMUSG00000010803.14	ENSMUST00000205546.2	4045	10	46623	160	44719	-160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCACCTTAGTGCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	42026367	42021925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_42024618_42026234
ENSMUSG00000010803.14_42022079_42031165_1	chr11	-	2832	3	ISM	ENSMUSG00000010803.14	ENST00000637827.1	1788	10	39921	-1988	39921	-313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAATTATTCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	42031165	42022078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_42024618_42026234_42026438_42031075
ENSMUSG00000010803.14_42022184_42037957_1	chr11	-	2831	4	ISM	ENSMUSG00000010803.14	ENST00000637827.1	1788	10	33129	-1883	33129	-418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTAGTCTGCTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	42037957	42022183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_42024618_42026234_42026438_42031075_42031229_42037916
ENSMUSG00000010803.14_42022287_42044184_1	chr11	-	2855	5	ISM	ENSMUSG00000010803.14	ENST00000637827.1	1788	10	26902	-1780	26902	-521	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCCGGCGTTAACCTA	NA	NA	NA	NA	NA	NA	NA	NA	42044184	42022286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_42024618_42026234_42026438_42031075_42031229_42037916_42038061_42044160
ENSMUSG00000010803.14_42022433_42045682_1	chr11	-	2815	6	ISM	ENSMUSG00000010803.14	ENST00000637827.1	1788	10	25404	-1634	25404	-667	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGATTTGGTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	42045682	42022432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_42024618_42026234_42026438_42031075_42031229_42037916_42038061_42044160_42044244_42045635
ENSMUSG00000010803.14_42022564_42053415_1	chr11	-	2893	7	ISM	ENSMUSG00000010803.14	ENST00000637827.1	1788	10	17671	-1503	17671	-798	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTAGAATCCATACCTG	NA	NA	NA	NA	NA	NA	NA	NA	42053415	42022563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_42024618_42026234_42026438_42031075_42031229_42037916_42038061_42044160_42044244_42045635_42045857_42053380
ENSMUSG00000010803.14_42022684_42066760_1	chr11	-	2838	8	ISM	ENSMUSG00000010803.14	ENST00000637827.1	1788	10	4326	-1383	4326	-918	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCTTTTGTCTGATAGA	NA	NA	NA	NA	NA	NA	NA	NA	42066760	42022683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_42024618_42026234_42026438_42031075_42031229_42037916_42038061_42044160_42044244_42045635_42045857_42053380_42053449_42066728
ENSMUSG00000010803.14_42022733_42066815_1	chr11	-	2844	8	ISM	ENSMUSG00000010803.14	ENST00000637827.1	1788	10	4271	-1334	4271	-967	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCCAGATGTTTTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	42066815	42022732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_42024618_42026234_42026438_42031075_42031229_42037916_42038061_42044160_42044244_42045635_42045857_42053380_42053449_42066728
ENSMUSG00000010803.14_42023127_42073737_1	chr11	-	2896	11	FSM	ENSMUSG00000010803.14	ENST00000428797.7	4278	11	0	1382	0	940	multi-exon	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAATTCAATTATACCGA	NA	NA	NA	NA	NA	NA	NA	NA	42073737	42023126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_42024618_42026234_42026438_42031075_42031229_42037916_42038061_42044160_42044244_42045635_42045857_42053380_42053449_42066728_42066839_42070386_42070476_42072992_42073217_42073627
ENSMUSG00000010803.14_42024066_42071055_1	chr11	-	1758	10	FSM	ENSMUSG00000010803.14	ENST00000637827.1	1788	10	31	-1	31	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGACAAGAGGAAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	42071055	42024065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_42024618_42026234_42026438_42031075_42031229_42037916_42038061_42044160_42044244_42045635_42045857_42053380_42053449_42066728_42066839_42070386_42070476_42070920
ENSMUSG00000010830.9_79400612_79411754_1	chr15	+	1225	5	FSM	ENSMUSG00000010830.9	ENSMUST00000010974.9	1411	5	0	186	0	-186	multi-exon	FALSE	canonical	NA	NA	NA	NA	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCACTGTGTAAATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	79400611	79411754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_79400842_79407011_79407113_79409004_79409164_79409867_79410121_79411272
ENSMUSG00000010830.9_79400791_79411940_1	chr15	+	1232	5	FSM	ENSMUSG00000010830.9	ENSMUST00000010974.9	1411	5	179	0	179	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCAAGTATTTATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	79400790	79411940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_79400842_79407011_79407113_79409004_79409164_79409867_79410121_79411272
ENSMUSG00000010911.13_102904020_102922989_1	chr2	+	913	7	NNC	ENSMUSG00000010911.13	novel	919	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAAATTTTCTTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	102904019	102922989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_102904187_102913305_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922262_102922809
ENSMUSG00000010911.13_102904020_102922989_3	chr2	+	912	7	NNC	ENSMUSG00000010911.13	novel	919	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAAATTTTCTTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	102904019	102922989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922262_102922816
ENSMUSG00000010914.11_102852421_102858683_1	chr2	-	322	3	ISM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	45175	1001	45124	-1001	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGCTACCAGGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	102858683	102852420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102852615_102854509_102854575_102858620
ENSMUSG00000010914.11_102858705_102865616_1	chr2	-	339	4	ISM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	38242	7285	38191	-7285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGCAACAGATAAAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	102865616	102858704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102858780_102860622_102860682_102863507_102863656_102865559
ENSMUSG00000010914.11_102863622_102871476_1	chr2	-	298	3	ISM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	32382	12202	32331	6342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGTTATCGCTAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	102871476	102863621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102863656_102865559_102865735_102871387
ENSMUSG00000010914.11_102865606_102872651_1	chr2	-	341	3	ISM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	31207	14186	31156	4358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAATGACCCCACCAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	102872651	102865605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102865735_102871387_102871487_102872538
ENSMUSG00000010914.11_102865654_102872711_1	chr2	-	353	3	ISM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	31147	14234	31096	4310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCATCTGTGCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	102872711	102865653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102865735_102871387_102871487_102872538
ENSMUSG00000010914.11_102871419_102877134_1	chr2	-	337	3	ISM	ENSMUSG00000010914.11	ENSMUST00000111183.2	2078	5	26673	1455	26673	-1455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGGCCCTCGCGGGATC	NA	NA	NA	NA	NA	NA	NA	NA	102877134	102871418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102871487_102872538_102872739_102877065
ENSMUSG00000010914.11_102872670_102903717_1	chr2	-	334	4	ISM	ENSMUSG00000010914.11	ENSMUST00000111183.2	2078	5	90	2706	90	-2706	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAACAGGTGGAAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	102903717	102872669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_102872739_102877065_102877167_102888841_102888923_102903634
ENSMUSG00000011096.18_44499666_44504046_1	chr7	+	723	5	FSM	ENSMUSG00000011096.18	ENSMUST00000107880.9	1757	5	235	799	235	-114	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATGCGCGCGCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	44499665	44504046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44499721_44501994_44502384_44503203_44503282_44503362_44503533_44504015
ENSMUSG00000011096.18_44501995_44504160_1	chr7	+	782	4	ISM	ENSMUSG00000011096.18	ENSMUST00000107882.8	1160	5	2942	0	2564	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAACAGAAAGCCTTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	44501994	44504160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44502384_44503203_44503282_44503362_44503533_44504015
ENSMUSG00000011096.18_44503246_44504471_1	chr7	+	662	3	ISM	ENSMUSG00000011096.18	ENSMUST00000107880.9	1757	5	3815	374	3815	311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCCCGAGGCCTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	44503245	44504471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44503282_44503362_44503533_44504015
ENSMUSG00000011096.18_44503401_44504596_1	chr7	+	713	2	ISM	ENSMUSG00000011096.18	ENSMUST00000107880.9	1757	5	3970	249	3970	-236	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGGTCTGACGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	44503400	44504596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44503533_44504015
ENSMUSG00000011114.19_37560059_37564465_1	chr9	-	1377	6	ISM	ENSMUSG00000011114.19	ENSMUST00000117654.3	1984	9	4143	0	4143	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGATTCTGACCCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	37564465	37560058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564328
ENSMUSG00000011114.19_37560059_37565586_1	chr9	-	1452	7	ISM	ENSMUSG00000011114.19	ENSMUST00000117654.3	1984	9	3022	0	3022	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGATTCTGACCCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	37565586	37560058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564328_37564466_37565511
ENSMUSG00000011114.19_37560363_37566388_1	chr9	-	1365	8	ISM	ENSMUSG00000011114.19	ENSMUST00000117654.3	1984	9	2220	304	2220	-304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGCCAGGTAGCTTATAG	NA	NA	NA	NA	NA	NA	NA	NA	37566388	37560362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564328_37564466_37565511_37565733_37566317
ENSMUSG00000011114.19_37560478_37568454_1	chr9	-	1403	9	NNC	ENSMUSG00000011114.19	novel	1984	9	NA	NA	154	-419	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTATTTGTTTCTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	37568454	37560477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564328_37564458_37565511_37565733_37566317_37566389_37568293
ENSMUSG00000011114.19_37560600_37568539_1	chr9	-	1374	9	FSM	ENSMUSG00000011114.19	ENSMUST00000117654.3	1984	9	69	541	69	-541	multi-exon	FALSE	canonical	NA	NA	NA	NA	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCACTCTGTGGAAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	37568539	37560599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564328_37564466_37565511_37565733_37566317_37566389_37568293
ENSMUSG00000011158.9_112923705_112951712_1	chr12	-	2002	16	ISM	ENSMUSG00000011158.9	ENSMUST00000011302.9	2615	18	12612	0	12612	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTGTGTGTTTATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	112951712	112923704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946677_112951536
ENSMUSG00000011158.9_112923705_112951713_3	chr12	-	1998	15	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	12611	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTGTGTGTTTATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	112951713	112923704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112951511
ENSMUSG00000011158.9_112923846_112963813_1	chr12	-	1958	17	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	511	-141	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTGAGACTCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	112963813	112923845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112951511_112951713_112956683_112956765_112963792
ENSMUSG00000011158.9_112923864_112963818_1	chr12	-	1932	17	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	506	-159	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCACGGCTCATAGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	112963818	112923863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112951524_112951713_112956683_112956765_112963792
ENSMUSG00000011158.9_112923901_112963867_1	chr12	-	1957	17	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	457	-196	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATCTGTTTTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	112963867	112923900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112951511_112951713_112956683_112956765_112963792
ENSMUSG00000011158.9_112923926_112963872_1	chr12	-	1924	17	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	452	-221	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCAGCGTCCTGGTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	112963872	112923925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112951524_112951713_112956683_112956765_112963792
ENSMUSG00000011158.9_112923954_112964016_1	chr12	-	2053	17	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	308	-249	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGCTACTGAGTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	112964016	112923953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112951511_112951713_112956683_112956765_112963792
ENSMUSG00000011158.9_112924791_112964016_1	chr12	-	1954	16	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	308	-1086	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCCGAGGACGAGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	112964016	112924790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112951524_112951713_112956683_112956765_112963792
ENSMUSG00000011158.9_112925343_112964143_1	chr12	-	1988	16	ISM	ENSMUSG00000011158.9	ENSMUST00000011302.9	2615	18	181	1638	181	-1638	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTGTCCCACACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	112964143	112925342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946677_112951536_112951713_112956683_112956765_112963792
ENSMUSG00000011158.9_112926052_112964223_1	chr12	-	1942	14	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	101	-2347	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAAGAGCAACTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	112964223	112926051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112951524_112951713_112956683_112956765_112963792
ENSMUSG00000011179.9_17594973_17597986_1	chr12	+	623	5	ISM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	178	3099	178	-3099	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGAGGGTTATCTATGC	NA	NA	NA	NA	NA	NA	NA	NA	17594972	17597986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950
ENSMUSG00000011179.9_17595114_17598331_1	chr12	+	641	6	ISM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	319	2754	319	-2754	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATTCCAAAGCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	17595113	17598331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309
ENSMUSG00000011179.9_17597148_17598444_1	chr12	+	647	5	ISM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	2353	2641	2353	-2641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGATCTCAGTGATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	17597147	17598444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309
ENSMUSG00000011179.9_17597361_17598868_1	chr12	+	686	6	ISM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	2566	2217	2566	-2217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTAATTACAGCATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	17597360	17598868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787
ENSMUSG00000011179.9_17597690_17599508_1	chr12	+	676	6	ISM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	2895	1577	2895	-1577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCGCATCAGCTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	17597689	17599508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424
ENSMUSG00000011179.9_17598109_17599917_1	chr12	+	646	7	ISM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	3314	1168	3314	-1168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCTTGATCGGATCGT	NA	NA	NA	NA	NA	NA	NA	NA	17598108	17599917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863
ENSMUSG00000011179.9_17598582_17600633_1	chr12	+	647	6	ISM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	3787	452	3787	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTCCCGCCGGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	17598581	17600633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
ENSMUSG00000011179.9_17599459_17600811_1	chr12	+	661	4	ISM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	4664	274	4664	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAACTTACTGCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	17599458	17600811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17599588_17599668_17599782_17599863_17600079_17600607
ENSMUSG00000011179.9_17599459_17600864_1	chr12	+	714	4	ISM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	4664	221	4664	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGTATGGAAGGCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	17599458	17600864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17599588_17599668_17599782_17599863_17600079_17600607
ENSMUSG00000011179.9_17599766_17601078_1	chr12	+	702	3	ISM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	4971	7	4971	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGGCATCAGGGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	17599765	17601078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17599782_17599863_17600079_17600607
ENSMUSG00000011254.17_45838260_45841132_1	chr11	-	1006	2	ISM	ENSMUSG00000011254.17	ENSMUST00000109254.2	2202	7	4883	590	4883	-590	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCCAAGAGGGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	45841132	45838259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_45839156_45841022
ENSMUSG00000011254.17_45838397_45842458_1	chr11	-	956	3	ISM	ENSMUSG00000011254.17	ENSMUST00000109254.2	2202	7	3557	727	3557	-727	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGATCCTGCACCATT	NA	NA	NA	NA	NA	NA	NA	NA	45842458	45838396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_45839156_45841022_45841131_45842369
ENSMUSG00000011254.17_45838769_45846152_1	chr11	-	982	6	FSM	ENSMUSG00000011254.17	ENSMUST00000011398.13	2250	6	169	1099	-137	-1099	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGTGTTAGAACATGA	NA	NA	NA	NA	NA	NA	NA	NA	45846152	45838768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_45839156_45841022_45841131_45842369_45842459_45843561_45843732_45844882_45845060_45846101
ENSMUSG00000011254.17_45838924_45846310_1	chr11	-	985	6	FSM	ENSMUSG00000011254.17	ENSMUST00000011398.13	2250	6	11	1254	11	-1254	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGCACTCCTGGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	45846310	45838923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_45839156_45841022_45841131_45842369_45842459_45843561_45843732_45844882_45845060_45846101
ENSMUSG00000011267.9_19311860_19313817_1	chr7	+	306	2	ISM	ENSMUSG00000011267.9	ENST00000303809.7	1090	3	554	658	554	-658	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAACCTCAAGGTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	19311859	19313817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_19311886_19313537
ENSMUSG00000011306.8_70495463_70512055_1	chr8	+	884	5	ISM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	0	12942	0	-12942	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACTGCTGGAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	70495462	70512055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931
ENSMUSG00000011306.8_70495684_70513309_1	chr8	+	888	7	ISM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	221	11688	221	-11688	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTCTGGGTGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	70495683	70513309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185
ENSMUSG00000011306.8_70501280_70517558_1	chr8	+	792	7	ISM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	5817	7439	5817	-7439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGGCTCCACAGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	70501279	70517558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486
ENSMUSG00000011306.8_70505320_70517715_1	chr8	+	819	6	ISM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	9857	7282	9857	-7282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGCCCACCGCCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	70505319	70517715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486
ENSMUSG00000011306.8_70509192_70522137_1	chr8	+	810	6	ISM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	13729	2860	13729	-2860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGGGCCTGGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	70509191	70522137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101
ENSMUSG00000011306.8_70511933_70522661_1	chr8	+	833	6	ISM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	16470	2336	16470	-2336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGATTATGCAGCACAAG	NA	NA	NA	NA	NA	NA	NA	NA	70511932	70522661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645
ENSMUSG00000011306.8_70511996_70522713_1	chr8	+	822	6	ISM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	16533	2284	16533	-2284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCGCTGCAGCAACACC	NA	NA	NA	NA	NA	NA	NA	NA	70511995	70522713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645
ENSMUSG00000011306.8_70512464_70522998_1	chr8	+	829	6	ISM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	17001	1999	17001	-1999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGATGGGTCGGGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	70512463	70522998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980
ENSMUSG00000011306.8_70513214_70523047_1	chr8	+	810	5	ISM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	17751	1950	17751	-1950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTGGAGAAGTTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	70513213	70523047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980
ENSMUSG00000011306.8_70517607_70524201_1	chr8	+	810	6	ISM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	22144	796	22144	-796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATCGACCGGCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	70517606	70524201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171
ENSMUSG00000011306.8_70517748_70524521_1	chr8	+	835	7	ISM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	22285	476	22285	-476	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGACTATGAAATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	70517747	70524521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ENSMUSG00000011306.8_70517802_70524584_1	chr8	+	844	7	ISM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	22339	413	22339	-413	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAGTCCCAATGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	70517801	70524584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ENSMUSG00000011306.8_70522185_70524704_1	chr8	+	834	6	ISM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	26722	293	26722	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATTCAGACTTTACCCC	NA	NA	NA	NA	NA	NA	NA	NA	70522184	70524704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ENSMUSG00000011306.8_70522759_70524823_1	chr8	+	816	5	ISM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	27296	174	27296	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCCTGGGCTGTCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	70522758	70524823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ENSMUSG00000011306.8_70523762_70524997_1	chr8	+	820	3	ISM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	28299	0	28299	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGCTCCTCTGGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	70523761	70524997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70523910_70524171_70524302_70524455
ENSMUSG00000011349.6_24571913_24576862_1	chr7	+	1279	8	ISM	ENSMUSG00000011349.6	ENSMUST00000011493.6	1619	9	2431	214	11	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTGGCTATTCTTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	24571912	24576862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24572131_24572204_24572360_24573346_24573424_24573622_24573804_24574331_24574459_24575172_24575234_24575373_24575549_24576577
ENSMUSG00000011349.6_24571967_24577076_1	chr7	+	1439	8	ISM	ENSMUSG00000011349.6	ENSMUST00000011493.6	1619	9	2485	0	65	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1008	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCGAGAGTTGATTATC	NA	NA	NA	NA	NA	NA	NA	NA	24571966	24577076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24572131_24572204_24572360_24573346_24573424_24573622_24573804_24574331_24574459_24575172_24575234_24575373_24575549_24576577
ENSMUSG00000011349.6_24572205_24577076_1	chr7	+	1275	7	ISM	ENSMUSG00000011349.6	ENSMUST00000011493.6	1619	9	2723	0	303	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCGAGAGTTGATTATC	NA	NA	NA	NA	NA	NA	NA	NA	24572204	24577076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24572360_24573346_24573424_24573622_24573804_24574331_24574459_24575172_24575234_24575373_24575549_24576577
ENSMUSG00000011382.9_45124688_45137597_1	chr7	-	639	4	NNC	ENSMUSG00000011382.9	novel	730	5	NA	NA	590	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCCTGCGACAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	45137597	45124687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_45124800_45131212_45131466_45136164_45136329_45137487
ENSMUSG00000011382.9_45124688_45137597_2	chr7	-	635	4	NNC	ENSMUSG00000011382.9	novel	730	5	NA	NA	590	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCCTGCGACAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	45137597	45124687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_45124792_45131212_45131466_45136164_45136329_45137483
ENSMUSG00000011382.9_45124688_45137597_3	chr7	-	632	4	NNC	ENSMUSG00000011382.9	novel	730	5	NA	NA	590	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCCTGCGACAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	45137597	45124687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_45124800_45131212_45131455_45136164_45136329_45137483
ENSMUSG00000011382.9_45124688_45138229_1	chr7	-	629	5	FSM	ENSMUSG00000011382.9	ENST00000523250.5	586	5	-42	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCCTGCGACAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	45138229	45124687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_45124800_45125028_45125177_45128432_45128558_45137483_45137596_45138097
ENSMUSG00000011382.9_45124688_45138229_3	chr7	-	622	5	NNC	ENSMUSG00000011382.9	novel	5323	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCCTGCGACAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	45138229	45124687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_45124800_45125028_45125177_45128432_45128558_45137483_45137589_45138097
ENSMUSG00000011589.10_56295213_56303881_1	chr17	+	1329	11	FSM	ENSMUSG00000011589.10	ENST00000597590.5	1374	11	91	-46	91	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCTGCACTGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	56295212	56303881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_56295256_56295673_56295776_56297211_56297235_56297418_56297541_56298166_56298377_56300842_56300942_56302356_56302517_56302857_56302938_56303071_56303233_56303420_56303510_56303641
ENSMUSG00000011658.17_44545570_44547027_1	chr7	+	512	4	NNC	ENSMUSG00000011658.17	novel	469	4	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGGGGTCTGCCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	44545569	44547027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_44545787_44545970_44546093_44546684_44546754_44546923
ENSMUSG00000011658.17_44545570_44547027_2	chr7	+	513	4	FSM	ENSMUSG00000011658.17	ENST00000526575.1	469	4	-44	0	40	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGGGGTCTGCCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	44545569	44547027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44545787_44545970_44546093_44546684_44546754_44546922
ENSMUSG00000011751.17_27073596_27102240_1	chr7	-	872	6	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	39760	17783	-6262	-17782	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGCAGCACATCAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	27102240	27073595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27073661_27074797_27075023_27090857_27091122_27093582_27093730_27097375_27097467_27102160
ENSMUSG00000011751.17_27074963_27103680_1	chr7	-	853	6	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	38320	19150	-7702	-19149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCGCTTCCGCTGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	27103680	27074962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27075023_27090857_27091122_27093582_27093730_27097375_27097467_27102160_27102364_27103592
ENSMUSG00000011751.17_27090917_27103798_1	chr7	-	852	5	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	38202	35104	-7820	-35103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTAGACCCCGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	27103798	27090916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27091122_27093582_27093730_27097375_27097467_27102160_27102364_27103592
ENSMUSG00000011751.17_27090981_27103863_1	chr7	-	853	5	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	38137	35168	-7885	-35167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGCTAGTGCAGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	27103863	27090980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27091122_27093582_27093730_27097375_27097467_27102160_27102364_27103592
ENSMUSG00000011751.17_27097415_27104164_1	chr7	-	827	3	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	37836	41602	-8186	-41601	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTGTGCTGCAGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	27104164	27097414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27097467_27102160_27102364_27103592
ENSMUSG00000011751.17_27102218_27104289_1	chr7	-	843	2	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	37711	46405	-8311	-46404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCAACGCCTACGGGG	NA	NA	NA	NA	NA	NA	NA	NA	27104289	27102217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27102364_27103592
ENSMUSG00000011751.17_27103607_27106671_1	chr7	-	873	2	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	35329	47794	-10693	-47793	internal_fragment	TRUE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCGCAACCAGGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	27106671	27103606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27104344_27106535
ENSMUSG00000011751.17_27103915_27107944_1	chr7	-	844	3	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	34056	48102	-11966	-48101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGCCGTCGAGGGGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	27107944	27103914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27104344_27106535_27106674_27107667
ENSMUSG00000011751.17_27104082_27108105_1	chr7	-	838	3	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	33895	48269	-12127	-48268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGACGCGCCTGCACCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	27108105	27104081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27104344_27106535_27106674_27107667
ENSMUSG00000011751.17_27104167_27108185_1	chr7	-	833	3	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	33815	48354	-12207	-48353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCGGCTCTACAGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	27108185	27104166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27104344_27106535_27106674_27107667
ENSMUSG00000011751.17_27106578_27108419_1	chr7	-	848	2	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	33581	50765	-12441	-50764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGATGAGGTGCGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	27108419	27106577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27106674_27107667
ENSMUSG00000011751.17_27108011_27116229_1	chr7	-	842	3	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	25771	52198	-20251	-52197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTCGCCTGGCGCGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	27116229	27108010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27108602_27114082_27114234_27116129
ENSMUSG00000011751.17_27118013_27133794_1	chr7	-	905	7	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	8206	62200	8206	-62199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGCTGGAGAAGCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	27133794	27118012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27118178_27118412_27118526_27123133_27123250_27126250_27126332_27127608_27127701_27132472_27132647_27133630
ENSMUSG00000011752.8_41900477_41904235_1	chr19	+	341	2	ISM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	115	2864	115	-2864	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAAGATCTGGAGACGA	NA	NA	NA	NA	NA	NA	NA	NA	41900476	41904235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41900626_41904043
ENSMUSG00000011752.8_41900515_41905102_1	chr19	+	407	3	ISM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	153	1997	153	-1997	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGACCAGCTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	41900514	41905102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41900626_41904043_41904319_41905081
ENSMUSG00000011752.8_41900515_41905147_1	chr19	+	452	3	ISM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	153	1952	153	-1952	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1701	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGAGCACTGCCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	41900514	41905147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41900626_41904043_41904319_41905081
ENSMUSG00000011752.8_41904204_41906162_1	chr19	+	414	3	ISM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	3842	937	3842	-937	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGCGCAAAGCCATGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	41904203	41906162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41904319_41905081_41905263_41906044
ENSMUSG00000011752.8_41904244_41906192_1	chr19	+	404	3	ISM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	3882	907	3882	-907	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	868	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGGCAAGGTGAAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	41904243	41906192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41904319_41905081_41905263_41906044
ENSMUSG00000011752.8_41905123_41906318_1	chr19	+	414	2	ISM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	4761	781	4761	-781	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1433	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTGTAGCTGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	41905122	41906318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41905263_41906044
ENSMUSG00000011752.8_41905182_41906362_1	chr19	+	399	2	ISM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	4820	737	4820	-737	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTATTTTATCCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	41905181	41906362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41905263_41906044
ENSMUSG00000011831.17_107895677_107936099_1	chr5	-	778	3	ISM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	86809	69	86809	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTATTAGTTTCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	107936099	107895676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107896324_107912541_107912638_107936064
ENSMUSG00000011831.17_107895760_107936142_1	chr5	-	738	3	ISM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	86766	152	86766	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGACTATGGGAAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	107936142	107895759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107896324_107912541_107912638_107936064
ENSMUSG00000011831.17_107896001_107943723_1	chr5	-	821	5	ISM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	79185	393	79185	-393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCGGAGTCTTGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	107943723	107896000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564
ENSMUSG00000011831.17_107936153_107960277_1	chr5	-	677	7	ISM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	62631	40545	62631	-40545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTCATGGCTGTGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	107960277	107936152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107958155_107958189_107960223
ENSMUSG00000011831.17_107943565_107963759_1	chr5	-	773	8	ISM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	59149	47957	59149	-47957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGCGGGCAGGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	107963759	107943564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107943724_107945678_107945820_107946991_107947127_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667
ENSMUSG00000011831.17_107943681_107964713_1	chr5	-	729	9	ISM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	58195	48073	58195	-48073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATGCTGTGAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	107964713	107943680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107943724_107945678_107945820_107946991_107947127_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639
ENSMUSG00000011831.17_107945760_107966822_1	chr5	-	743	9	ISM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	56086	50152	56086	-50152	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGCTGAGGGAAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	107966822	107945759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107945820_107946991_107947127_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754
ENSMUSG00000011831.17_107946992_107967546_1	chr5	-	818	9	ISM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	55362	51384	55362	-51384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGACTCCATAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	107967546	107946991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107947127_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469
ENSMUSG00000011831.17_107947103_107968332_1	chr5	-	740	10	ISM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	54576	51495	54576	-51495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATTTCGTGCTGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	107968332	107947102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107947127_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297
ENSMUSG00000011831.17_107961442_107968522_1	chr5	-	789	7	ISM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	54386	65834	54386	-65834	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATGGAAGAACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	107968522	107961441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297
ENSMUSG00000011831.17_107963477_107969627_1	chr5	-	815	7	ISM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	53281	67869	53281	-67869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAATTTGTATGATCT	NA	NA	NA	NA	NA	NA	NA	NA	107969627	107963476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570
ENSMUSG00000011831.17_107963731_107969760_1	chr5	-	787	6	ISM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	53148	68123	53148	-68123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCGCTTCTTCAGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	107969760	107963730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570
ENSMUSG00000011831.17_107964736_107990032_1	chr5	-	760	6	ISM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	32876	69128	32876	-69128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTCAATGTATGCATCATC	NA	NA	NA	NA	NA	NA	NA	NA	107990032	107964735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936
ENSMUSG00000011831.17_107966858_107990166_1	chr5	-	743	5	ISM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	32742	71250	32742	-71250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTGTTAAATTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	107990166	107966857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936
ENSMUSG00000011831.17_107967490_108022910_1	chr5	-	756	5	ISM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	-2	71882	-2	-71882	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATTGTTGCTGATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	108022910	107967489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108022854
ENSMUSG00000011837.5_4303080_4305632_1	chr8	+	948	5	FSM	ENSMUSG00000011837.5	ENSMUST00000011981.5	1536	5	0	588	0	-586	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAGATGGAGGGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	4303079	4305632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_4303305_4304281_4304402_4304550_4304620_4304991_4305374_4305480
ENSMUSG00000011837.5_4304280_4305886_1	chr8	+	979	4	ISM	ENSMUSG00000011837.5	ENSMUST00000011981.5	1536	5	1200	334	1186	-332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGACACAGTGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	4304279	4305886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_4304402_4304550_4304620_4304991_4305374_4305480
ENSMUSG00000011837.5_4304549_4306064_1	chr8	+	1037	3	ISM	ENSMUSG00000011837.5	ENSMUST00000011981.5	1536	5	1469	156	1455	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCCATAATAGCAGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	4304548	4306064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_4304620_4304991_4305374_4305480
ENSMUSG00000011837.5_4305179_4306220_1	chr8	+	935	2	ISM	ENSMUSG00000011837.5	ENSMUST00000208316.2	1190	5	2085	-2	2085	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGATTCCCCCTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	4305178	4306220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_4305374_4305480
ENSMUSG00000011877.14_77384258_77396888_1	chr11	+	2160	17	ISM	ENSMUSG00000011877.14	ENST00000579937.5	2781	19	63	780	63	-780	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGTGGGCACAAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	77384257	77396888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705
ENSMUSG00000011877.14_77384397_77397068_1	chr11	+	2085	18	ISM	ENSMUSG00000011877.14	ENST00000579937.5	2781	19	202	600	0	-600	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGGGGCCACCGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	77384396	77397068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004
ENSMUSG00000011877.14_77389917_77397243_1	chr11	+	1964	18	ISM	ENSMUSG00000011877.14	ENST00000579937.5	2781	19	5722	425	5520	-425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTCACTGCGGCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	77389916	77397243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397174
ENSMUSG00000011877.14_77389917_77397300_1	chr11	+	2021	18	ISM	ENSMUSG00000011877.14	ENST00000579937.5	2781	19	5722	368	5520	-368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGTGCCTCCAGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	77389916	77397300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397174
ENSMUSG00000011877.14_77391206_77397564_1	chr11	+	2026	15	ISM	ENSMUSG00000011877.14	ENST00000579937.5	2781	19	7011	104	6809	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGTGCCCTGGTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	77391205	77397564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397174
ENSMUSG00000011877.14_77391219_77397599_1	chr11	+	2048	15	ISM	ENSMUSG00000011877.14	ENST00000579937.5	2781	19	7024	69	6822	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGAAATGTGAGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	77391218	77397599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397174
ENSMUSG00000011877.14_77391287_77397643_1	chr11	+	2024	15	ISM	ENSMUSG00000011877.14	ENST00000579937.5	2781	19	7092	25	6890	-25	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCTCCCTCTGTACATA	NA	NA	NA	NA	NA	NA	NA	NA	77391286	77397643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397174
ENSMUSG00000011877.14_77391293_77397668_1	chr11	+	2043	15	ISM	ENSMUSG00000011877.14	ENST00000579937.5	2781	19	7098	0	6896	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCTGCTGATGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	77391292	77397668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397174
ENSMUSG00000011877.14_77391350_77397668_1	chr11	+	1985	15	NNC	ENSMUSG00000011877.14	novel	2781	19	NA	NA	6953	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCTGCTGATGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	77391349	77397668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397175
ENSMUSG00000011884.14_114812225_114814459_1	chr5	-	175	2	ISM	ENSMUSG00000011884.14	ENSMUST00000012028.14	1762	5	14586	4766	14510	-3936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGGAACGCGACGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	114814459	114812224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_114812266_114814325
ENSMUSG00000011884.14_114814371_114815741_1	chr5	-	149	2	ISM	ENSMUSG00000011884.14	ENSMUST00000112212.2	799	5	13228	6082	13228	-6082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTAAAGTGGGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	114815741	114814370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_114814460_114815681
ENSMUSG00000011958.18_69896748_69914553_1	chr9	+	1418	11	FSM	ENSMUSG00000011958.18	ENSMUST00000034754.12	2464	11	0	1046	0	-132	multi-exon	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTGCAACTCTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	69896747	69914553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
ENSMUSG00000011958.18_69896797_69911106_1	chr9	+	1282	9	FSM	ENSMUSG00000011958.18	ENSMUST00000117450.8	1465	9	0	183	0	-183	multi-exon	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTACGCTAAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	69896796	69911106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850
ENSMUSG00000011958.18_69896918_69911289_1	chr9	+	1344	9	FSM	ENSMUSG00000011958.18	ENSMUST00000117450.8	1465	9	121	0	121	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTAGAATTTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	69896917	69911289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850
ENSMUSG00000011958.18_69902760_69914686_1	chr9	+	1270	10	ISM	ENSMUSG00000011958.18	ENSMUST00000034754.12	2464	11	6012	913	0	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAGTATTTATATACATA	NA	NA	NA	NA	NA	NA	NA	NA	69902759	69914686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
ENSMUSG00000011958.18_69902760_69914822_1	chr9	+	1406	10	ISM	ENSMUSG00000011958.18	ENSMUST00000034754.12	2464	11	6012	777	0	137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCATGTAAGACTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	69902759	69914822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
ENSMUSG00000011958.18_69904458_69914397_1	chr9	+	732	7	ISM	ENSMUSG00000011958.18	ENSMUST00000165389.8	945	9	1698	0	1698	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCGTGTCCAGCCCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	69904457	69914397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
ENSMUSG00000011958.18_69906374_69914553_1	chr9	+	808	6	ISM	ENSMUSG00000011958.18	ENSMUST00000165389.8	945	9	3614	-156	3614	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTGCAACTCTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	69906373	69914553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
ENSMUSG00000011958.18_69906404_69915090_1	chr9	+	1351	7	ISM	ENSMUSG00000011958.18	ENSMUST00000034754.12	2464	11	9656	509	3644	405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTATATATTTGTATATA	NA	NA	NA	NA	NA	NA	NA	NA	69906403	69915090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
ENSMUSG00000011958.18_69906469_69915151_1	chr9	+	1347	7	ISM	ENSMUSG00000011958.18	ENSMUST00000034754.12	2464	11	9721	448	3709	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAAGAAAGCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	69906468	69915151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
ENSMUSG00000011958.18_69906509_69915217_1	chr9	+	1373	7	ISM	ENSMUSG00000011958.18	ENSMUST00000034754.12	2464	11	9761	382	3749	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGGGTTGCAGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	69906508	69915217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
ENSMUSG00000011958.18_69908123_69914686_1	chr9	+	764	5	ISM	ENSMUSG00000011958.18	ENSMUST00000165389.8	945	9	5363	-289	5363	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAGTATTTATATACATA	NA	NA	NA	NA	NA	NA	NA	NA	69908122	69914686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
ENSMUSG00000011958.18_69908190_69915331_1	chr9	+	1378	6	ISM	ENSMUSG00000011958.18	ENSMUST00000034754.12	2464	11	11442	268	5430	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCGTCGGCTGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	69908189	69915331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
ENSMUSG00000011958.18_69909354_69915537_1	chr9	+	1454	5	ISM	ENSMUSG00000011958.18	ENSMUST00000034754.12	2464	11	12606	62	6594	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGTCTTAATTACCT	NA	NA	NA	NA	NA	NA	NA	NA	69909353	69915537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
ENSMUSG00000011958.18_69910661_69914822_1	chr9	+	663	3	ISM	ENSMUSG00000011958.18	ENSMUST00000165389.8	945	9	7901	-425	7901	137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCATGTAAGACTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	69910660	69914822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69910748_69910850_69910950_69914345
ENSMUSG00000011960.13_98441431_98444723_1	chr15	-	1228	3	ISM	ENSMUSG00000011960.13	ENSMUST00000012104.7	2175	9	20794	339	20794	-339	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAGCTCAGACACAAG	NA	NA	NA	NA	NA	NA	NA	NA	98444723	98441430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98442490_98444404_98444476_98444625
ENSMUSG00000011960.13_98442020_98465456_1	chr15	-	1186	9	FSM	ENSMUSG00000011960.13	ENSMUST00000012104.7	2175	9	61	928	61	-928	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTATGCGTATGCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	98465456	98442019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98442490_98444404_98444476_98444625_98444790_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
ENSMUSG00000011960.13_98442221_98465740_1	chr15	-	1269	9	FSM	ENSMUSG00000011960.13	ENSMUST00000012104.7	2175	9	-223	1129	-223	-1129	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGACTAGTGAGAGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	98465740	98442220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98442490_98444404_98444476_98444625_98444790_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
ENSMUSG00000011960.13_98444679_98466055_1	chr15	-	1191	7	ISM	ENSMUSG00000011960.13	ENSMUST00000012104.7	2175	9	-538	3587	-538	-3587	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACTGGTGGGAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	98466055	98444678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98444790_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
ENSMUSG00000012017.5_17621076_17625317_1	chr16	+	1629	8	ISM	ENSMUSG00000012017.5	ENSMUST00000012161.5	3308	11	5930	840	5897	-837	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGGCGGCCAGCGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	17621075	17625317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17621164_17621245_17621465_17621600_17621730_17622169_17622274_17622349_17622468_17622672_17622789_17624212_17624366_17624615
ENSMUSG00000012017.5_17622371_17625917_1	chr16	+	1668	4	ISM	ENSMUSG00000012017.5	ENSMUST00000012161.5	3308	11	7225	240	7192	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGGGGGCTCAGCCCATG	NA	NA	NA	NA	NA	NA	NA	NA	17622370	17625917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17622468_17622672_17622789_17624212_17624366_17624615
ENSMUSG00000012017.5_17624294_17626157_1	chr16	+	1614	2	ISM	ENSMUSG00000012017.5	ENSMUST00000012161.5	3308	11	9148	0	9115	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTGCTCTAATTACT	NA	NA	NA	NA	NA	NA	NA	NA	17624293	17626157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17624366_17624615
ENSMUSG00000012076.9_55908208_55915255_1	chr12	+	508	4	ISM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	25099	1266	25099	-1266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATCGCGTTTATTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	55908207	55915255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55908240_55909918_55909959_55912735_55912863_55914946
ENSMUSG00000012076.9_55912814_55915407_1	chr12	+	510	2	ISM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	29705	1114	29705	-1114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCTCCGCTGCCACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	55912813	55915407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55912863_55914946
ENSMUSG00000012114.18_17469085_17491013_1	chr16	-	2073	10	ISM	ENSMUSG00000012114.18	ENSMUST00000232645.2	3105	17	49751	13	49677	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGGAGTTTATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	17491013	17469084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17490932
ENSMUSG00000012114.18_17469848_17473435_1	chr16	-	1101	8	ISM	ENSMUSG00000012114.18	ENST00000382974.6	2183	16	67255	0	67255	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTCCCATTCTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	17473435	17469847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307
ENSMUSG00000012114.18_17470004_17489443_1	chr16	-	1108	10	ISM	ENSMUSG00000012114.18	ENST00000382974.6	2183	16	51247	156	51247	-156	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCTGCCTAGCAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	17489443	17470003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408
ENSMUSG00000012114.18_17470043_17489511_1	chr16	-	1137	10	ISM	ENSMUSG00000012114.18	ENST00000382974.6	2183	16	51179	195	51179	-195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAACACCTGGGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	17489511	17470042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408
ENSMUSG00000012114.18_17470613_17491000_1	chr16	-	1106	10	ISM	ENSMUSG00000012114.18	ENST00000382974.6	2183	16	49690	765	49690	-765	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGAGCCCAATGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	17491000	17470612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932
ENSMUSG00000012114.18_17471093_17491101_1	chr16	-	1110	9	ISM	ENSMUSG00000012114.18	ENST00000382974.6	2183	16	49589	1245	49589	-1245	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAACAACGGTACTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	17491101	17471092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932
ENSMUSG00000012114.18_17471158_17491144_1	chr16	-	1088	9	ISM	ENSMUSG00000012114.18	ENST00000382974.6	2183	16	49546	1310	49546	-1310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGCAAGGTGAAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	17491144	17471157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932
ENSMUSG00000012114.18_17471366_17492285_1	chr16	-	1102	9	ISM	ENSMUSG00000012114.18	ENST00000382974.6	2183	16	48405	1518	48405	-1518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTGTACCGCACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	17492285	17471365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268
ENSMUSG00000012114.18_17471427_17492339_1	chr16	-	1095	9	ISM	ENSMUSG00000012114.18	ENST00000382974.6	2183	16	48351	1579	48351	-1579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTGCCAACCACTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	17492339	17471426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268
ENSMUSG00000012114.18_17471805_17491045_1	chr16	-	868	8	ISM	ENSMUSG00000012114.18	ENSMUST00000232236.2	3404	18	49766	2720	49645	-1957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACATGGCAGTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	17491045	17471804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932
ENSMUSG00000012114.18_17472875_17492522_1	chr16	-	1171	7	ISM	ENSMUSG00000012114.18	ENST00000382974.6	2183	16	48168	3027	48168	-3027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTGGCCCAGGGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	17492522	17472874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268
ENSMUSG00000012114.18_17473072_17491262_1	chr16	-	909	6	ISM	ENSMUSG00000012114.18	ENSMUST00000232236.2	3404	18	49549	3987	49428	-3224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTGTCCAAGTACATCGA	NA	NA	NA	NA	NA	NA	NA	NA	17491262	17473071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932
ENSMUSG00000012114.18_17473134_17503369_1	chr16	-	1064	8	ISM	ENSMUSG00000012114.18	ENST00000382974.6	2183	16	37321	3286	37321	-3286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATGAGCCCAGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	17503369	17473133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316
ENSMUSG00000012114.18_17473373_17492369_1	chr16	-	871	6	ISM	ENSMUSG00000012114.18	ENSMUST00000232236.2	3404	18	48442	4288	48321	-3525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTGACAGCACGCACCC	NA	NA	NA	NA	NA	NA	NA	NA	17492369	17473372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268
ENSMUSG00000012114.18_17473400_17540685_1	chr16	-	1113	9	ISM	ENSMUSG00000012114.18	ENST00000382974.6	2183	16	5	3552	5	-3552	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCTTCACCACAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	17540685	17473399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ENSMUSG00000012114.18_17481302_17498522_1	chr16	-	882	5	ISM	ENSMUSG00000012114.18	ENSMUST00000232236.2	3404	18	42289	12217	42168	-11454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCACCATGTCTGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	17498522	17481301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412
ENSMUSG00000012114.18_17490933_17515558_1	chr16	-	967	6	ISM	ENSMUSG00000012114.18	ENSMUST00000080936.14	3230	17	25203	21848	25132	-21085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACCCAAAGCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	17515558	17490932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470
ENSMUSG00000012117.14_133696486_133710231_1	chr4	-	2308	3	ISM	ENSMUSG00000012117.14	ENSMUST00000012262.12	3133	9	17967	118	17473	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCAGAAATTAAGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	133710231	133696485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133698565_133707434_133707543_133710110
ENSMUSG00000012117.14_133696845_133721545_1	chr4	-	2235	6	ISM	ENSMUSG00000012117.14	ENSMUST00000012262.12	3133	9	6653	477	6159	-477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATGAATTATGTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	133721545	133696844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472
ENSMUSG00000012117.14_133696999_133724235_1	chr4	-	2257	7	ISM	ENSMUSG00000012117.14	ENSMUST00000105887.8	2038	9	3947	-505	3469	505	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACTGAAACCAAGAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	133724235	133696998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133698568_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132
ENSMUSG00000012117.14_133697148_133727704_1	chr4	-	2247	8	ISM	ENSMUSG00000012117.14	ENSMUST00000105887.8	2038	9	478	-356	0	356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGCTGTCTGTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	133727704	133697147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133698568_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579
ENSMUSG00000012117.14_133697323_133728182_1	chr4	-	2219	9	FSM	ENSMUSG00000012117.14	ENSMUST00000105887.8	2038	9	0	-181	0	181	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCCAACTCTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	133728182	133697322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_133698568_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
ENSMUSG00000012126.17_133829930_133853811_1	chr4	+	981	9	ISM	ENSMUSG00000012126.17	ENST00000314675.11	1132	10	14	216	14	-216	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	854	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGGTGGGTATAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	133829929	133853811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_133829960_133835562_133835667_133836846_133836970_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676
ENSMUSG00000012126.17_133835660_133853818_1	chr4	+	856	8	NNC	ENSMUSG00000012126.17	novel	1132	10	NA	NA	5744	-209	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTATAGGGCAGGACTAG	NA	NA	NA	NA	NA	NA	NA	NA	133835659	133853818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_133835667_133836846_133836970_133850702_133850915_133851152_133851231_133852149_133852266_133852376_133852481_133853517_133853592_133853676
ENSMUSG00000012126.17_133835660_133853818_2	chr4	+	858	8	NNC	ENSMUSG00000012126.17	novel	1132	10	NA	NA	5744	-209	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTATAGGGCAGGACTAG	NA	NA	NA	NA	NA	NA	NA	NA	133835659	133853818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_133835667_133836846_133836970_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853679
ENSMUSG00000012126.17_133835660_133853818_3	chr4	+	861	8	ISM	ENSMUSG00000012126.17	ENST00000314675.11	1132	10	5744	209	5744	-209	internal_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTATAGGGCAGGACTAG	NA	NA	NA	NA	NA	NA	NA	NA	133835659	133853818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_133835667_133836846_133836970_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676
ENSMUSG00000012126.17_133835660_133853818_4	chr4	+	860	8	NNC	ENSMUSG00000012126.17	novel	1132	10	NA	NA	5744	-209	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	196	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTATAGGGCAGGACTAG	NA	NA	NA	NA	NA	NA	NA	NA	133835659	133853818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_133835667_133836847_133836970_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676
ENSMUSG00000012126.17_133835660_133853913_1	chr4	+	877	9	ISM	ENSMUSG00000012126.17	ENST00000314675.11	1132	10	5744	114	5744	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAGATCTTGAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	133835659	133853913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_133835667_133836846_133836970_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ENSMUSG00000012126.17_133836899_133854087_1	chr4	+	992	8	ISM	ENSMUSG00000012126.17	ENST00000314675.11	1132	10	6983	-60	6983	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTCACAAGGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	133836898	133854087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_133836970_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ENSMUSG00000012126.17_133836948_133854087_1	chr4	+	943	8	ISM	ENSMUSG00000012126.17	ENST00000314675.11	1132	10	7032	-60	7032	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	805	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTCACAAGGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	133836947	133854087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_133836970_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ENSMUSG00000012296.17_46569185_46572116_1	chr17	-	1472	4	ISM	ENSMUSG00000012296.17	ENSMUST00000225080.2	2412	10	21809	382	2597	-382	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGAAATATTTATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	46572116	46569184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061
ENSMUSG00000012296.17_46569701_46582816_1	chr17	-	1471	9	ISM	ENSMUSG00000012296.17	ENSMUST00000164342.10	2559	11	11123	901	-8103	-898	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGAGACTCACTGCCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	46582816	46569700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725
ENSMUSG00000012296.17_46569866_46593908_1	chr17	-	1462	11	FSM	ENSMUSG00000012296.17	ENSMUST00000164342.10	2559	11	31	1066	17	-1063	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCCAAGGGTCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	46593908	46569865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ENSMUSG00000012296.17_46570127_46593354_1	chr17	-	1037	9	ISM	ENSMUSG00000012296.17	ENSMUST00000225080.2	2412	10	571	1324	571	-1324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGAGTACTGCAGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	46593354	46570126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271
ENSMUSG00000012405.17_4198667_4201873_1	chr14	+	1879	4	NNC	ENSMUSG00000012405.17	novel	1922	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTTATCTTTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	4198666	4201873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_4198738_4199235_4199418_4199652_4199790_4200384
ENSMUSG00000012405.17_4198667_4201873_2	chr14	+	1879	4	NNC	ENSMUSG00000012405.17	novel	1922	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTTATCTTTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	4198666	4201873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_4198738_4199240_4199418_4199652_4199790_4200379
ENSMUSG00000012405.17_4198726_4201873_1	chr14	+	1820	4	NNC	ENSMUSG00000012405.17	novel	1922	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTTATCTTTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	4198725	4201873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_4198738_4199235_4199418_4199652_4199790_4200384
ENSMUSG00000012405.17_4198726_4201873_2	chr14	+	1820	4	NNC	ENSMUSG00000012405.17	novel	1922	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTTATCTTTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	4198725	4201873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_4198738_4199240_4199418_4199652_4199790_4200379
ENSMUSG00000012405.17_4199234_4200696_1	chr14	+	628	3	FSM	ENSMUSG00000012405.17	ENST00000439981.1	596	3	-13	-19	-13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAAATTCATATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	4199233	4200696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_4199408_4199652_4199790_4200379
ENSMUSG00000012422.15_90237560_90249061_1	chr13	+	488	3	ISM	ENSMUSG00000012422.15	ENSMUST00000012566.9	1541	4	-321	3719	318	-3719	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATCTAATCTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	90237559	90249061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_90237903_90246480_90246591_90249026
ENSMUSG00000012422.15_90237853_90252780_1	chr13	+	482	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	611	7596	-28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTTCTCTCACTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	90237852	90252780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ENSMUSG00000012422.15_90246526_90252902_1	chr13	+	509	3	ISM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	9284	7474	8645	122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGGGCTTCAAAATAATG	NA	NA	NA	NA	NA	NA	NA	NA	90246525	90252902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_90246591_90249026_90249062_90252493
ENSMUSG00000012429.10_17870214_17871567_1	chr13	+	333	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	216	2123	216	-274	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCAACAGTACAGCAATAC	NA	NA	NA	NA	NA	NA	NA	NA	17870213	17871567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_17870406_17871426
ENSMUSG00000012429.10_17870356_17871708_1	chr13	+	332	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	358	1982	358	-133	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATGATGACTTTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	17870355	17871708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_17870406_17871426
ENSMUSG00000012443.5_37373201_37375883_1	chr19	+	369	3	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	8350	34424	8350	-34424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGACCACGGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	37373200	37375883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_37373259_37375464_37375651_37375758
ENSMUSG00000012443.5_37398015_37399843_1	chr19	+	366	4	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	33164	10464	33164	-10464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTATTACAAGAACTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	37398014	37399843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_37398050_37398173_37398333_37398974_37399082_37399778
ENSMUSG00000012483.5_8256161_8259512_1	chr6	-	626	5	FSM	ENSMUSG00000012483.5	ENST00000396682.6	626	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTTTCTTAAGATTGC	NA	NA	NA	NA	NA	NA	NA	NA	8259512	8256160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_8256248_8256694_8256804_8257686_8257762_8258999_8259264_8259421
ENSMUSG00000012519.15_112038429_112064541_1	chr8	-	1711	11	FSM	ENSMUSG00000012519.15	ENSMUST00000120432.3	1976	11	268	-3	268	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCAAAGTTCTTATTAG	NA	NA	NA	NA	NA	NA	NA	NA	112064541	112038428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_112038710_112041596_112041738_112042124_112042175_112042994_112043147_112046009_112046086_112046348_112046485_112049334_112049433_112054446_112054631_112058448_112058523_112059953_112060387_112064455
ENSMUSG00000012519.15_112038571_112064602_1	chr8	-	1630	11	FSM	ENSMUSG00000012519.15	ENSMUST00000120432.3	1976	11	207	139	207	-139	multi-exon	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTTTTCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	112064602	112038570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_112038710_112041596_112041738_112042124_112042175_112042994_112043147_112046009_112046086_112046348_112046485_112049334_112049433_112054446_112054631_112058448_112058523_112059953_112060387_112064455
ENSMUSG00000012519.15_112038636_112064657_1	chr8	-	1620	11	FSM	ENSMUSG00000012519.15	ENSMUST00000120432.3	1976	11	152	204	152	-204	multi-exon	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCATATCTGTTAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	112064657	112038635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_112038710_112041596_112041738_112042124_112042175_112042994_112043147_112046009_112046086_112046348_112046485_112049334_112049433_112054446_112054631_112058448_112058523_112059953_112060387_112064455
ENSMUSG00000012519.15_112041599_112060347_1	chr8	-	1322	9	NNC	ENSMUSG00000012519.15	novel	1336	9	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTAGGAGTCTTTCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	112060347	112041598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_112041738_112042124_112042175_112042994_112043140_112046009_112046086_112046348_112046485_112049334_112049433_112054446_112054631_112058448_112058523_112059927
ENSMUSG00000012519.15_112041599_112060347_2	chr8	-	1323	9	NNC	ENSMUSG00000012519.15	novel	1336	9	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTAGGAGTCTTTCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	112060347	112041598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_112041738_112042124_112042175_112042994_112043147_112046015_112046086_112046348_112046485_112049334_112049433_112054446_112054631_112058448_112058523_112059927
ENSMUSG00000012519.15_112041599_112060347_3	chr8	-	1329	9	FSM	ENSMUSG00000012519.15	ENST00000308807.12	1336	9	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTAGGAGTCTTTCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	112060347	112041598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_112041738_112042124_112042175_112042994_112043147_112046009_112046086_112046348_112046485_112049334_112049433_112054446_112054631_112058448_112058523_112059927
ENSMUSG00000012519.15_112041599_112060347_4	chr8	-	1324	9	NNC	ENSMUSG00000012519.15	novel	1336	9	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTAGGAGTCTTTCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	112060347	112041598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_112041738_112042124_112042175_112042994_112043147_112046009_112046086_112046348_112046480_112049334_112049433_112054446_112054631_112058448_112058523_112059927
ENSMUSG00000012519.15_112041599_112060347_5	chr8	-	1324	9	NNC	ENSMUSG00000012519.15	novel	1336	9	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1868	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTAGGAGTCTTTCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	112060347	112041598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_112041738_112042124_112042175_112042994_112043147_112046009_112046086_112046348_112046485_112049334_112049428_112054446_112054631_112058448_112058523_112059927
ENSMUSG00000012519.15_112041599_112064809_1	chr8	-	1696	10	ISM	ENSMUSG00000012519.15	ENSMUST00000120432.3	1976	11	0	3167	0	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTAGGAGTCTTTCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	112064809	112041598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112041738_112042124_112042175_112042994_112043147_112046009_112046086_112046348_112046485_112049334_112049433_112054446_112054631_112058448_112058523_112059953_112060387_112064455
ENSMUSG00000012535.15_29541570_29568933_1	chr6	-	1688	13	ISM	ENSMUSG00000012535.15	ENST00000482320.5	3537	24	40824	0	40665	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	673	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAGGAAAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	29568933	29541569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852
ENSMUSG00000012535.15_29541570_29568980_1	chr6	-	1735	13	ISM	ENSMUSG00000012535.15	ENST00000482320.5	3537	24	40777	0	40618	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAGGAAAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	29568980	29541569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852
ENSMUSG00000012535.15_29541570_29569065_1	chr6	-	1820	13	ISM	ENSMUSG00000012535.15	ENST00000482320.5	3537	24	40692	0	40533	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAGGAAAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	29569065	29541569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852
ENSMUSG00000012535.15_29541821_29572650_1	chr6	-	1751	15	ISM	ENSMUSG00000012535.15	ENST00000627585.2	3682	23	37244	321	36948	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTCCCACAATCAGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	29572650	29541820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29569090_29571034_29571127_29572584
ENSMUSG00000012535.15_29543261_29560120_1	chr6	-	789	7	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	49478	0	49478	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGTGTATACTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	29560120	29543260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080
ENSMUSG00000012535.15_29543261_29560221_1	chr6	-	890	7	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	49377	0	49377	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGTGTATACTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	29560221	29543260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080
ENSMUSG00000012535.15_29555152_29579696_1	chr6	-	1832	14	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	29902	11891	29902	-11891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATATATTTCTACTC	NA	NA	NA	NA	NA	NA	NA	NA	29579696	29555151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29569090_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519
ENSMUSG00000012535.15_29555170_29565783_1	chr6	-	843	8	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	43815	11909	43815	-11909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGAGTAGCCAATGATGT	NA	NA	NA	NA	NA	NA	NA	NA	29565783	29555169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662
ENSMUSG00000012535.15_29556977_29582385_1	chr6	-	1895	14	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	27213	13716	27213	-13716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCCTTCTGAAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	29582385	29556976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29569090_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164
ENSMUSG00000012535.15_29557004_29568945_1	chr6	-	841	8	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	40653	13743	40653	-13743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGACCTATTCAGGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	29568945	29557003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852
ENSMUSG00000012535.15_29558807_29586111_1	chr6	-	1742	14	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	23487	15546	23487	-15546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGAGTACGGCATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	29586111	29558806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29569090_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036
ENSMUSG00000012535.15_29560081_29571128_1	chr6	-	894	7	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	38470	16820	38470	-16820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTCTCCATGAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	29571128	29560080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29569090_29571034
ENSMUSG00000012535.15_29561369_29589085_1	chr6	-	1744	14	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	20513	18108	20513	-18108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCAGGAAGTAAGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	29589085	29561368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29569090_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027
ENSMUSG00000012535.15_29562891_29575069_1	chr6	-	829	7	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	34529	19630	34529	-19630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTCTTAGATCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	29575069	29562890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29562934_29565169_29565262_29565662_29565855_29568852_29569090_29571034_29571127_29572584_29572693_29575004
ENSMUSG00000012535.15_29565771_29579592_1	chr6	-	880	7	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	30006	22510	30006	-22510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTTTGTCGCGATCATATG	NA	NA	NA	NA	NA	NA	NA	NA	29579592	29565770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29565855_29568852_29569090_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519
ENSMUSG00000012535.15_29568853_29579696_1	chr6	-	900	6	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	29902	25592	29902	-25592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGAATTCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	29579696	29568852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29569090_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519
ENSMUSG00000012535.15_29568853_29609606_1	chr6	-	1717	11	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	-8	25592	0	-25592	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1071	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGAATTCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	29609606	29568852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29569090_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ENSMUSG00000012535.15_29568957_29582211_1	chr6	-	842	7	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	27387	25696	27387	-25696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTCCATCTCCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	29582211	29568956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29569090_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164
ENSMUSG00000012535.15_29569020_29582250_1	chr6	-	818	7	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	27348	25759	27348	-25759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTAAGTACTTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	29582250	29569019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29569090_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164
ENSMUSG00000012535.15_29569065_29582385_1	chr6	-	908	7	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	27213	25804	27213	-25804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCAGCCTATTACTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	29582385	29569064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29569090_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164
ENSMUSG00000012535.15_29571088_29586098_1	chr6	-	815	7	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	23500	27827	23500	-27827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAGAAGCGGTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	29586098	29571087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036
ENSMUSG00000012535.15_29575037_29589046_1	chr6	-	824	7	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	20552	31776	20552	-31776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCGACACTGCCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	29589046	29575036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027
ENSMUSG00000012535.15_29575096_29589092_1	chr6	-	811	7	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	20506	31835	20506	-31835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGATGAAGTTATTCACA	NA	NA	NA	NA	NA	NA	NA	NA	29589092	29575095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027
ENSMUSG00000012609.20_85871759_85912729_1	chr12	+	1374	10	FSM	ENSMUSG00000012609.20	ENST00000286650.9	1380	10	7	-1	7	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGCTCCAATTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	85871758	85912729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85912295
ENSMUSG00000012609.20_85871759_85912729_2	chr12	+	1366	10	NNC	ENSMUSG00000012609.20	novel	1380	10	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGCTCCAATTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	85871758	85912729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911306_85911384_85912295
ENSMUSG00000012609.20_85871759_85912729_3	chr12	+	1365	10	NNC	ENSMUSG00000012609.20	novel	1380	10	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGCTCCAATTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	85871758	85912729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910346_85910408_85911298_85911384_85912295
ENSMUSG00000012609.20_85871795_85912729_1	chr12	+	1327	10	NNC	ENSMUSG00000012609.20	novel	1380	10	NA	NA	43	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGCTCCAATTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	85871794	85912729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892031_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85912295
ENSMUSG00000012609.20_85871795_85912729_2	chr12	+	1338	10	FSM	ENSMUSG00000012609.20	ENST00000286650.9	1380	10	43	-1	43	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGCTCCAATTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	85871794	85912729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85912295
ENSMUSG00000012609.20_85923276_85965925_1	chr12	+	1178	11	ISM	ENSMUSG00000012609.20	ENSMUST00000110224.8	4647	32	51524	134608	-22889	24406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAACCGTGCTGCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	85923275	85965925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85964448_85964607_85965704
ENSMUSG00000012609.20_85980332_86100115_1	chr12	+	1150	7	ISM	ENSMUSG00000012609.20	ENSMUST00000040273.14	4147	33	108589	-133	34167	133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAACAGGGAACAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	85980331	86100115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
ENSMUSG00000012609.20_85980390_86100182_1	chr12	+	1159	7	ISM	ENSMUSG00000012609.20	ENSMUST00000040273.14	4147	33	108647	-200	34225	200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGCAGAACACCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	85980389	86100182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
ENSMUSG00000012609.20_86003339_86100533_1	chr12	+	1267	5	ISM	ENSMUSG00000012609.20	ENSMUST00000110224.8	4647	32	131587	0	57174	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGTTTTTTTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	86003338	86100533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
ENSMUSG00000012609.20_86003402_86100533_1	chr12	+	1204	5	ISM	ENSMUSG00000012609.20	ENSMUST00000110224.8	4647	32	131650	0	57237	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGTTTTTTTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	86003401	86100533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
ENSMUSG00000012819.17_60138896_60148493_1	chr10	-	2345	14	ISM	ENSMUSG00000012819.17	ENST00000619887.4	3792	22	8824	0	8824	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTTCCCGACGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	60148493	60138895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60139480_60140603_60140727_60140836_60140967_60141356_60141418_60141509_60141551_60141718_60141799_60141887_60142009_60143242_60143341_60143624_60143882_60146455_60146618_60146694_60146947_60147038_60147169_60148048_60148163_60148301
ENSMUSG00000012819.17_60139131_60150351_1	chr10	-	2359	16	ISM	ENSMUSG00000012819.17	ENST00000619887.4	3792	22	6966	235	6966	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGGCAGGGGCACGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	60150351	60139130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60139480_60140603_60140727_60140836_60140967_60141356_60141418_60141509_60141551_60141718_60141799_60141887_60142009_60143242_60143341_60143624_60143882_60146455_60146618_60146694_60146947_60147038_60147169_60148048_60148163_60148301_60148494_60149971_60150184_60150314
ENSMUSG00000012819.17_60139131_60150405_1	chr10	-	2413	16	ISM	ENSMUSG00000012819.17	ENST00000619887.4	3792	22	6912	235	6912	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGGCAGGGGCACGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	60150405	60139130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60139480_60140603_60140727_60140836_60140967_60141356_60141418_60141509_60141551_60141718_60141799_60141887_60142009_60143242_60143341_60143624_60143882_60146455_60146618_60146694_60146947_60147038_60147169_60148048_60148163_60148301_60148494_60149971_60150184_60150314
ENSMUSG00000012819.17_60139322_60151437_1	chr10	-	2345	17	ISM	ENSMUSG00000012819.17	ENST00000619887.4	3792	22	5880	426	5880	-426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCCGGAGGACGACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	60151437	60139321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60139480_60140603_60140727_60140836_60140967_60141356_60141418_60141509_60141551_60141718_60141799_60141887_60142009_60143242_60143341_60143624_60143882_60146455_60146618_60146694_60146947_60147038_60147169_60148048_60148163_60148301_60148494_60149971_60150184_60150314_60150493_60151401
ENSMUSG00000012819.17_60139382_60151481_1	chr10	-	2329	17	ISM	ENSMUSG00000012819.17	ENST00000619887.4	3792	22	5836	486	5836	-486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGAATCCACATGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	60151481	60139381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60139480_60140603_60140727_60140836_60140967_60141356_60141418_60141509_60141551_60141718_60141799_60141887_60142009_60143242_60143341_60143624_60143882_60146455_60146618_60146694_60146947_60147038_60147169_60148048_60148163_60148301_60148494_60149971_60150184_60150314_60150493_60151401
ENSMUSG00000012819.17_60140600_60152519_1	chr10	-	2413	17	ISM	ENSMUSG00000012819.17	ENST00000398788.4	3897	23	4798	1704	4798	-1704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTCCTGCAGGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	60152519	60140599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60140727_60140836_60140967_60141356_60141418_60141509_60141551_60141718_60141799_60141887_60142009_60143242_60143341_60143624_60143882_60146455_60146618_60146694_60146947_60147038_60147169_60148048_60148163_60148301_60148494_60149971_60150184_60150314_60150493_60151401_60151522_60152381
ENSMUSG00000012819.17_60140896_60152895_1	chr10	-	2325	17	ISM	ENSMUSG00000012819.17	ENST00000398788.4	3897	23	4422	2000	4422	-2000	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCCTGAGAACCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	60152895	60140895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60140967_60141356_60141418_60141509_60141551_60141718_60141799_60141887_60142009_60143242_60143341_60143624_60143882_60146455_60146618_60146694_60146947_60147038_60147169_60148048_60148163_60148301_60148494_60149971_60150184_60150314_60150493_60151401_60151522_60152381_60152520_60152797
ENSMUSG00000012819.17_60141966_60155378_1	chr10	-	2324	15	ISM	ENSMUSG00000012819.17	ENST00000398788.4	3897	23	1939	3070	1939	-3070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCAGGAACTACAACGT	NA	NA	NA	NA	NA	NA	NA	NA	60155378	60141965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60142009_60143242_60143341_60143624_60143882_60146455_60146618_60146694_60146947_60147038_60147169_60148048_60148163_60148301_60148494_60149971_60150184_60150314_60150493_60151401_60151522_60152381_60152520_60152797_60152968_60153534_60153760_60155345
ENSMUSG00000012819.17_60143317_60157069_1	chr10	-	2330	15	ISM	ENSMUSG00000012819.17	ENST00000398788.4	3897	23	248	4421	248	-4421	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACTTTGCGCAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	60157069	60143316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60143341_60143624_60143882_60146455_60146618_60146694_60146947_60147038_60147169_60148048_60148163_60148301_60148494_60149971_60150184_60150314_60150493_60151401_60151522_60152381_60152520_60152797_60152968_60153534_60153760_60155345_60155463_60157030
ENSMUSG00000012819.17_60143773_60157258_1	chr10	-	2347	14	ISM	ENSMUSG00000012819.17	ENST00000398788.4	3897	23	59	4877	59	-4877	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATCGGCATCTACATCC	NA	NA	NA	NA	NA	NA	NA	NA	60157258	60143772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60143882_60146455_60146618_60146694_60146947_60147038_60147169_60148048_60148163_60148301_60148494_60149971_60150184_60150314_60150493_60151401_60151522_60152381_60152520_60152797_60152968_60153534_60153760_60155345_60155463_60157030
ENSMUSG00000012819.17_60220632_60301859_1	chr10	-	2899	20	ISM	ENSMUSG00000012819.17	ENST00000616684.4	3964	28	131679	-1	131679	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGGTCATCACGGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	60301859	60220631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60221028_60222706_60222843_60227500_60227650_60228750_60228812_60242063_60242213_60243153_60243268_60244793_60244947_60246483_60246704_60248841_60248988_60249320_60249511_60255483_60255592_60256824_60256938_60262386_60262504_60264087_60264161_60269532_60269661_60270285_60270392_60272421_60272660_60274574_60274640_60301223_60301383_60301781
ENSMUSG00000012819.17_60220741_60301931_1	chr10	-	2862	20	ISM	ENSMUSG00000012819.17	ENST00000616684.4	3964	28	131607	108	131607	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAAGCCTATTCTATCGA	NA	NA	NA	NA	NA	NA	NA	NA	60301931	60220740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60221028_60222706_60222843_60227500_60227650_60228750_60228812_60242063_60242213_60243153_60243268_60244793_60244947_60246483_60246704_60248841_60248988_60249320_60249511_60255483_60255592_60256824_60256938_60262386_60262504_60264087_60264161_60269532_60269661_60270285_60270392_60272421_60272660_60274574_60274640_60301223_60301383_60301781
ENSMUSG00000012819.17_60220843_60322916_1	chr10	-	2908	21	ISM	ENSMUSG00000012819.17	ENSMUST00000105464.9	11090	70	209353	82314	110622	-210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACACTTCTCAATGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	60322916	60220842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60221028_60222706_60222843_60227500_60227650_60228750_60228812_60242063_60242213_60243153_60243268_60244793_60244947_60246483_60246704_60248841_60248988_60249320_60249511_60255483_60255592_60256824_60256938_60262386_60262504_60264087_60264161_60269532_60269661_60270285_60270392_60272421_60272660_60274574_60274640_60301223_60301383_60301781_60301932_60322768
ENSMUSG00000012819.17_60220848_60322919_1	chr10	-	2907	21	ISM	ENSMUSG00000012819.17	ENST00000398809.9	3961	28	110619	215	110619	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACGTGACACTTCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	60322919	60220847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60221028_60222706_60222843_60227500_60227650_60228750_60228805_60242059_60242213_60243153_60243268_60244793_60244947_60246483_60246704_60248841_60248988_60249320_60249511_60255483_60255592_60256824_60256938_60262386_60262504_60264087_60264161_60269532_60269661_60270285_60270392_60272421_60272660_60274574_60274640_60301223_60301383_60301781_60301932_60322764
ENSMUSG00000012819.17_60220966_60324436_1	chr10	-	2949	22	ISM	ENSMUSG00000012819.17	ENSMUST00000105464.9	11090	70	207833	82437	109102	-333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCACGGGGCTCATCGT	NA	NA	NA	NA	NA	NA	NA	NA	60324436	60220965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60221028_60222706_60222843_60227500_60227650_60228750_60228812_60242063_60242213_60243153_60243268_60244793_60244947_60246483_60246704_60248841_60248988_60249320_60249511_60255483_60255592_60256824_60256938_60262386_60262504_60264087_60264161_60269532_60269661_60270285_60270392_60272421_60272660_60274574_60274640_60301223_60301383_60301781_60301932_60322768_60322958_60324313
ENSMUSG00000012819.17_60222790_60366763_1	chr10	-	2911	23	ISM	ENSMUSG00000012819.17	ENSMUST00000105464.9	11090	70	165506	84261	66775	-2157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTACAACCGCCTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	60366763	60222789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60222843_60227500_60227650_60228750_60228812_60242063_60242213_60243153_60243268_60244793_60244947_60246483_60246704_60248841_60248988_60249320_60249511_60255483_60255592_60256824_60256938_60262386_60262504_60264087_60264161_60269532_60269661_60270285_60270392_60272421_60272660_60274574_60274640_60301223_60301383_60301781_60301932_60322768_60322958_60324313_60324427_60359264_60359344_60366725
ENSMUSG00000012819.17_60227589_60370245_1	chr10	-	2937	23	ISM	ENSMUSG00000012819.17	ENSMUST00000105464.9	11090	70	162024	89060	63293	-6956	internal_fragment	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCTGGACAGGGAACGGA	NA	NA	NA	NA	NA	NA	NA	NA	60370245	60227588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60227650_60228750_60228812_60242063_60242213_60243153_60243268_60244793_60244947_60246483_60246704_60248841_60248988_60249320_60249511_60255483_60255592_60256824_60256938_60262386_60262504_60264087_60264161_60269532_60269661_60270285_60270392_60272421_60272660_60274574_60274640_60301223_60301383_60301781_60301932_60322768_60322958_60324313_60324427_60359264_60359344_60366725_60366855_60370169
ENSMUSG00000012819.17_60228747_60370364_1	chr10	-	2999	22	ISM	ENSMUSG00000012819.17	ENSMUST00000105464.9	11090	70	161905	90218	63174	-8114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTTGCTGCGGGATAGG	NA	NA	NA	NA	NA	NA	NA	NA	60370364	60228746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60228812_60242063_60242213_60243153_60243268_60244793_60244947_60246483_60246704_60248841_60248988_60249320_60249511_60255483_60255592_60256824_60256938_60262386_60262504_60264087_60264161_60269532_60269661_60270285_60270392_60272421_60272660_60274574_60274640_60301223_60301383_60301781_60301932_60322768_60322958_60324313_60324427_60359264_60359344_60366725_60366855_60370169
ENSMUSG00000012819.17_60242146_60432545_1	chr10	-	2904	22	ISM	ENSMUSG00000012819.17	ENSMUST00000105464.9	11090	70	99724	103617	993	-520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAACCGGCCCATCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	60432545	60242145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60242213_60243153_60243268_60244793_60244947_60246483_60246704_60248841_60248988_60249320_60249511_60255483_60255592_60256824_60256938_60262386_60262504_60264087_60264161_60269532_60269661_60270285_60270392_60272421_60272660_60274574_60274640_60301223_60301383_60301781_60301932_60322768_60322958_60324313_60324427_60359264_60359344_60366725_60366855_60370169_60370365_60432493
ENSMUSG00000012819.17_60243216_60433447_1	chr10	-	2917	23	ISM	ENSMUSG00000012819.17	ENSMUST00000105464.9	11090	70	98822	104687	91	1569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTAGTCGGCCTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	60433447	60243215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60243268_60244793_60244947_60246483_60246704_60248841_60248988_60249320_60249511_60255483_60255592_60256824_60256938_60262386_60262504_60264087_60264161_60269532_60269661_60270285_60270392_60272421_60272660_60274574_60274640_60301223_60301383_60301781_60301932_60322768_60322958_60324313_60324427_60359264_60359344_60366725_60366855_60370169_60370365_60432493_60432587_60432713_60432762_60433394
ENSMUSG00000012848.16_12656263_12659528_1	chr7	+	372	3	ISM	ENSMUSG00000012848.16	ENSMUST00000004554.14	761	6	46	1085	18	-1075	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTTTTGTCCTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	12656262	12659528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12656316_12656899_12657009_12659318
ENSMUSG00000012848.16_12656263_12660613_1	chr7	+	765	6	FSM	ENSMUSG00000012848.16	ENST00000598495.5	773	6	18	-10	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	12656262	12660613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_12656316_12656899_12657009_12659268_12659529_12659663_12659793_12660322_12660422_12660498
ENSMUSG00000012848.16_12656945_12659736_1	chr7	+	347	3	ISM	ENSMUSG00000012848.16	ENSMUST00000108539.8	794	6	728	876	700	-867	internal_fragment	FALSE	canonical	NA	NA	NA	NA	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGTACAGTGAGACGACAG	NA	NA	NA	NA	NA	NA	NA	NA	12656944	12659736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12657009_12659318_12659529_12659663
ENSMUSG00000012848.16_12659403_12660421_1	chr7	+	354	3	ISM	ENSMUSG00000012848.16	ENST00000598495.5	773	6	3158	182	3158	-182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTCAGGGCATACCACT	NA	NA	NA	NA	NA	NA	NA	NA	12659402	12660421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12659529_12659663_12659793_12660322
ENSMUSG00000012848.16_12659662_12660613_1	chr7	+	345	3	ISM	ENSMUSG00000012848.16	ENST00000598495.5	773	6	3417	-10	3417	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	12659661	12660613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12659793_12660322_12660422_12660498
ENSMUSG00000012889.9_84852618_84857419_1	chr8	+	1137	8	ISM	ENSMUSG00000012889.9	ENSMUST00000093380.5	2090	10	0	1737	0	-404	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTGTGCCTCCCGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	84852617	84857419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84852731_84852834_84853057_84853856_84853951_84854226_84854292_84854413_84854524_84855198_84855356_84855892_84856009_84857159
ENSMUSG00000012889.9_84852618_84857480_1	chr8	+	1198	8	ISM	ENSMUSG00000012889.9	ENSMUST00000093380.5	2090	10	0	1676	0	-343	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGCGCTGGGTGCGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	84852617	84857480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84852731_84852834_84853057_84853856_84853951_84854226_84854292_84854413_84854524_84855198_84855356_84855892_84856009_84857159
ENSMUSG00000012889.9_84852933_84857630_1	chr8	+	1137	7	ISM	ENSMUSG00000012889.9	ENSMUST00000093380.5	2090	10	315	1526	315	-193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGGCTGCCTGAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	84852932	84857630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84853057_84853856_84853951_84854226_84854292_84854413_84854524_84855198_84855356_84855892_84856009_84857159
ENSMUSG00000012889.9_84853854_84857823_1	chr8	+	1144	5	FSM	ENSMUSG00000012889.9	ENST00000254320.7	1144	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTAACTACAATGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	84853853	84857823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_84853951_84854413_84854524_84855198_84855356_84855892_84856009_84857159
ENSMUSG00000012889.9_84853854_84857823_2	chr8	+	1209	6	ISM	ENSMUSG00000012889.9	ENSMUST00000093380.5	2090	10	1236	1333	0	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTAACTACAATGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	84853853	84857823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84853951_84854226_84854292_84854413_84854524_84855198_84855356_84855892_84856009_84857159
ENSMUSG00000012889.9_84854259_84858594_1	chr8	+	1142	6	ISM	ENSMUSG00000012889.9	ENSMUST00000093380.5	2090	10	1641	562	405	-562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTGCAGGCTAACCGTA	NA	NA	NA	NA	NA	NA	NA	NA	84854258	84858594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84854292_84854413_84854524_84855198_84855356_84855892_84856009_84857159_84857818_84858526
ENSMUSG00000012889.9_84854447_84858765_1	chr8	+	1172	6	ISM	ENSMUSG00000012889.9	ENSMUST00000093380.5	2090	10	1829	391	593	-391	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGACCAGCATCAGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	84854446	84858765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84854524_84855198_84855356_84855892_84856009_84857159_84857818_84858526_84858676_84858750
ENSMUSG00000012889.9_84855300_84858906_1	chr8	+	1135	5	ISM	ENSMUSG00000012889.9	ENSMUST00000093380.5	2090	10	2682	250	1446	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGTGGCCAAGTAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	84855299	84858906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84855356_84855892_84856009_84857159_84857818_84858526_84858676_84858750
ENSMUSG00000012889.9_84855967_84859145_1	chr8	+	1244	4	ISM	ENSMUSG00000012889.9	ENSMUST00000093380.5	2090	10	3349	11	2113	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCACAGGGGACTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	84855966	84859145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84856009_84857159_84857818_84858526_84858676_84858750
ENSMUSG00000013155.11_106430605_106431343_1	chr8	-	263	3	ISM	ENSMUSG00000013155.11	ENST00000602644.5	1087	6	3235	284	3222	-284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGCTGAGAGCCCAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	106431343	106430604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106430654_106430744_106430882_106431266
ENSMUSG00000013155.11_106430755_106433215_1	chr8	-	271	3	ISM	ENSMUSG00000013155.11	ENST00000602644.5	1087	6	1363	434	1350	-434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTACAAAGTGAGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	106433215	106430754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106430882_106431266_106431393_106433197
ENSMUSG00000013155.11_106430834_106433268_1	chr8	-	245	3	ISM	ENSMUSG00000013155.11	ENST00000602644.5	1087	6	1310	513	1297	-513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTAGCCAGCCAGACCCGT	NA	NA	NA	NA	NA	NA	NA	NA	106433268	106430833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106430882_106431266_106431393_106433197
ENSMUSG00000013160.8_106251097_106266108_1	chr8	-	1348	7	ISM	ENSMUSG00000013160.8	ENSMUST00000013304.8	1629	8	26571	0	26571	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTGTCTGTCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	106266108	106251096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106251697_106251788_106251867_106251954_106252132_106252255_106252334_106255805_106255886_106257446_106257626_106265952
ENSMUSG00000013160.8_106251097_106266124_1	chr8	-	1364	7	ISM	ENSMUSG00000013160.8	ENSMUST00000013304.8	1629	8	26555	0	26555	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTGTCTGTCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	106266124	106251096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106251697_106251788_106251867_106251954_106252132_106252255_106252334_106255805_106255886_106257446_106257626_106265952
ENSMUSG00000013160.8_106251362_106292679_1	chr8	-	1364	8	FSM	ENSMUSG00000013160.8	ENSMUST00000013304.8	1629	8	0	265	0	-265	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTGATCAAGAATGGACC	NA	NA	NA	NA	NA	NA	NA	NA	106292679	106251361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_106251697_106251788_106251867_106251954_106252132_106252255_106252334_106255805_106255886_106257446_106257626_106265952_106266125_106292414
ENSMUSG00000013338.17_155876923_155886483_1	chr2	-	1069	9	ISM	ENSMUSG00000013338.17	ENST00000430275.6	3276	26	8439	0	8384	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCGTGTGGAGTCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	155886483	155876922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155877005_155877095_155877213_155877799_155877935_155878520_155878675_155879268_155879422_155880984_155881102_155881189_155881278_155885939_155886041_155886361
ENSMUSG00000013338.17_155877112_155886692_1	chr2	-	1088	9	ISM	ENSMUSG00000013338.17	ENST00000430275.6	3276	26	8230	189	8175	-189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTTCCGTGTTGAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	155886692	155877111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155877213_155877799_155877935_155878520_155878675_155879268_155879422_155880984_155881102_155881189_155881278_155885939_155886041_155886361_155886483_155886574
ENSMUSG00000013338.17_155877845_155887006_1	chr2	-	1073	9	ISM	ENSMUSG00000013338.17	ENST00000430275.6	3276	26	7916	922	7861	-922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCCCACTAGTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	155887006	155877844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155877935_155878520_155878675_155879268_155879422_155880984_155881102_155881189_155881278_155885939_155886041_155886361_155886483_155886574_155886753_155886935
ENSMUSG00000013338.17_155878628_155887471_1	chr2	-	1057	9	ISM	ENSMUSG00000013338.17	ENST00000430275.6	3276	26	7451	1705	7396	-1705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCTGGGGCTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	155887471	155878627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155878675_155879268_155879422_155880984_155881102_155881189_155881278_155885939_155886041_155886361_155886483_155886574_155886753_155886935_155887045_155887328
ENSMUSG00000013338.17_155879357_155887605_1	chr2	-	1056	8	ISM	ENSMUSG00000013338.17	ENST00000430275.6	3276	26	7317	2434	7262	-2434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCATCCCTGCACAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	155887605	155879356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155879422_155880984_155881102_155881189_155881278_155885939_155886041_155886361_155886483_155886574_155886753_155886935_155887045_155887328
ENSMUSG00000013338.17_155881221_155888112_1	chr2	-	1061	7	ISM	ENSMUSG00000013338.17	ENST00000430275.6	3276	26	6810	4298	6755	-4298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCGAGCGAAACTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	155888112	155881220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155881278_155885939_155886041_155886361_155886483_155886574_155886753_155886935_155887045_155887328_155887700_155887988
ENSMUSG00000013338.17_155886656_155889291_1	chr2	-	1079	6	ISM	ENSMUSG00000013338.17	ENST00000430275.6	3276	26	5631	9733	5576	-9733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGACAGAGGGGCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	155889291	155886655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155886753_155886935_155887045_155887328_155887700_155887988_155888176_155888863_155889048_155889160
ENSMUSG00000013338.17_155886981_155889604_1	chr2	-	1046	6	ISM	ENSMUSG00000013338.17	ENST00000430275.6	3276	26	5318	10058	5263	-10058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTTCACTGGCCAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	155889604	155886980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155887045_155887328_155887700_155887988_155888176_155888863_155889048_155889160_155889321_155889524
ENSMUSG00000013338.17_155887402_155890191_1	chr2	-	1061	7	ISM	ENSMUSG00000013338.17	ENST00000430275.6	3276	26	4731	10479	4676	-10479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGCGAGGATGCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	155890191	155887401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155887700_155887988_155888176_155888863_155889048_155889160_155889321_155889524_155889610_155889786_155889850_155890107
ENSMUSG00000013338.17_155887624_155890895_1	chr2	-	1050	9	ISM	ENSMUSG00000013338.17	ENST00000430275.6	3276	26	4027	10701	3972	-10701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCAAAGTCTCAACGAAG	NA	NA	NA	NA	NA	NA	NA	NA	155890895	155887623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155887700_155887988_155888176_155888863_155889048_155889160_155889321_155889524_155889610_155889786_155889850_155890107_155890240_155890348_155890410_155890793
ENSMUSG00000013338.17_155887668_155890958_1	chr2	-	1069	9	ISM	ENSMUSG00000013338.17	ENST00000430275.6	3276	26	3964	10745	3909	-10745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCCCTCTATGGCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	155890958	155887667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155887700_155887988_155888176_155888863_155889048_155889160_155889321_155889524_155889610_155889786_155889850_155890107_155890240_155890348_155890410_155890793
ENSMUSG00000013338.17_155888061_155891636_1	chr2	-	1099	10	ISM	ENSMUSG00000013338.17	ENST00000430275.6	3276	26	3286	11138	3231	-11138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTTGTGGATGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	155891636	155888060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155888176_155888863_155889048_155889160_155889321_155889524_155889610_155889786_155889850_155890107_155890240_155890348_155890410_155890793_155890959_155891354_155891397_155891544
ENSMUSG00000013338.17_155888944_155894135_1	chr2	-	1062	11	ISM	ENSMUSG00000013338.17	ENST00000430275.6	3276	26	787	12021	732	-12021	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCAGCCTGGCCCGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	155894135	155888943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155889048_155889160_155889321_155889524_155889610_155889786_155889850_155890107_155890240_155890348_155890410_155890793_155890959_155891354_155891397_155891544_155891637_155893895_155893996_155894077
ENSMUSG00000013338.17_155889203_155894867_1	chr2	-	1082	12	ISM	ENSMUSG00000013338.17	ENST00000430275.6	3276	26	55	12280	0	-12280	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCCACCCCCATGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	155894867	155889202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155889321_155889524_155889610_155889786_155889850_155890107_155890240_155890348_155890410_155890793_155890959_155891354_155891397_155891544_155891637_155893895_155893996_155894077_155894167_155894480_155894537_155894788
ENSMUSG00000013465.20_25089724_25094273_1	chr2	-	1416	7	ISM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	7228	0	7228	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGGAATCTGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	25094273	25089723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209
ENSMUSG00000013465.20_25089909_25095206_1	chr2	-	1338	8	ISM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	6295	185	6295	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGTCCATGCTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	25095206	25089908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138
ENSMUSG00000013465.20_25090050_25096357_1	chr2	-	1428	9	ISM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	5144	326	5144	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAATCTGCACAAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	25096357	25090049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171
ENSMUSG00000013465.20_25090198_25099970_1	chr2	-	1385	10	ISM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	1531	474	1531	-474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAAAGGTCCTCCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	25099970	25090197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865
ENSMUSG00000013465.20_25090273_25100086_1	chr2	-	1426	10	ISM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	1415	549	1415	-549	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGGTGTAGGCTGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	25100086	25090272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865
ENSMUSG00000013465.20_25090417_25100500_1	chr2	-	1343	11	ISM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	1001	693	1001	-693	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAAAGCCCAGTCCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	25100500	25090416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449
ENSMUSG00000013465.20_25090697_25100785_1	chr2	-	1369	11	ISM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	716	973	716	-973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGCTCTGGAGCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	25100785	25090696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720
ENSMUSG00000013465.20_25090697_25100856_1	chr2	-	1440	11	ISM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	645	973	645	-973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGCTCTGGAGCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	25100856	25090696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720
ENSMUSG00000013465.20_25091166_25101166_1	chr2	-	1329	11	ISM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	335	1442	335	-1442	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTCCACCTGCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	25101166	25091165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ENSMUSG00000013465.20_25093235_25101393_1	chr2	-	1441	10	ISM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	108	3511	108	-3511	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTGGGACTATACTA	NA	NA	NA	NA	NA	NA	NA	NA	25101393	25093234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ENSMUSG00000013465.20_25093903_25101501_1	chr2	-	1377	8	ISM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	0	4179	0	-4179	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTATGAGGTCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	25101501	25093902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ENSMUSG00000013483.15_119212679_119217522_1	chr11	+	913	6	ISM	ENSMUSG00000013483.15	ENST00000344227.6	3037	19	4741	18099	4741	-18099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCAGGAGAGTGTTCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	119212678	119217522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119212787_119213403_119213730_119214956_119215125_119216263_119216384_119216880_119217007_119217457
ENSMUSG00000013483.15_119213492_119219356_1	chr11	+	857	6	ISM	ENSMUSG00000013483.15	ENST00000344227.6	3037	19	5554	16265	5554	-16265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGATGCATGCTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	119213491	119219356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119213730_119214956_119215125_119216263_119216384_119216880_119217007_119217457_119217608_119219301
ENSMUSG00000013483.15_119213632_119222141_1	chr11	+	858	7	ISM	ENSMUSG00000013483.15	ENST00000344227.6	3037	19	5694	13480	5694	-13480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCAGCAGTCCCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	119213631	119222141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119213730_119214956_119215125_119216263_119216384_119216880_119217007_119217457_119217608_119219301_119219419_119222062
ENSMUSG00000013483.15_119214973_119224393_1	chr11	+	907	7	ISM	ENSMUSG00000013483.15	ENST00000344227.6	3037	19	7035	11228	7035	-11228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCAGGGGTCTTCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	119214972	119224393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119215125_119216263_119216384_119216880_119217007_119217457_119217608_119219301_119219419_119222062_119222206_119224294
ENSMUSG00000013483.15_119216305_119224729_1	chr11	+	860	7	ISM	ENSMUSG00000013483.15	ENST00000344227.6	3037	19	8367	10892	8367	-10892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCACTGGGATCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	119216304	119224729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119216384_119216880_119217007_119217457_119217608_119219301_119219419_119222062_119222206_119224294_119224434_119224623
ENSMUSG00000013483.15_119216923_119228559_1	chr11	+	868	7	ISM	ENSMUSG00000013483.15	ENST00000344227.6	3037	19	8985	7062	8985	-7062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATACAACGCTGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	119216922	119228559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119217007_119217457_119217608_119219301_119219419_119222062_119222206_119224294_119224434_119224623_119224817_119228517
ENSMUSG00000013483.15_119217495_119229161_1	chr11	+	933	7	ISM	ENSMUSG00000013483.15	ENST00000344227.6	3037	19	9557	6460	9557	-6460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGCAAACTCACTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	119217494	119229161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119217608_119219301_119219419_119222062_119222206_119224294_119224434_119224623_119224817_119228517_119228645_119229060
ENSMUSG00000013483.15_119224369_119231890_1	chr11	+	873	7	ISM	ENSMUSG00000013483.15	ENST00000344227.6	3037	19	16431	3731	16431	-3731	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGGCCCCGGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	119224368	119231890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119224434_119224623_119224817_119228517_119228645_119229060_119229299_119229697_119229762_119230400_119230513_119231816
ENSMUSG00000013483.15_119224744_119234051_1	chr11	+	871	7	ISM	ENSMUSG00000013483.15	ENST00000344227.6	3037	19	16806	1570	16806	-1570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCACCCGGCATGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	119224743	119234051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119224817_119228517_119228645_119229060_119229299_119229697_119229762_119230400_119230513_119231816_119231991_119233968
ENSMUSG00000013483.15_119229059_119235387_1	chr11	+	853	7	ISM	ENSMUSG00000013483.15	ENST00000344227.6	3037	19	21121	234	21121	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGGAGCAGTTCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	119229058	119235387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119229299_119229697_119229762_119230400_119230513_119231816_119231991_119233968_119234091_119234720_119234837_119235362
ENSMUSG00000013483.15_119229114_119235444_1	chr11	+	855	7	ISM	ENSMUSG00000013483.15	ENST00000344227.6	3037	19	21176	177	21176	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTCTGTACAGCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	119229113	119235444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119229299_119229697_119229762_119230400_119230513_119231816_119231991_119233968_119234091_119234720_119234837_119235362
ENSMUSG00000013483.15_119229184_119235516_1	chr11	+	857	7	ISM	ENSMUSG00000013483.15	ENST00000344227.6	3037	19	21246	105	21246	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATTGCAGATGAGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	119229183	119235516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119229299_119229697_119229762_119230400_119230513_119231816_119231991_119233968_119234091_119234720_119234837_119235362
ENSMUSG00000013495.16_108787371_108794818_1	chr5	+	1731	8	ISM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	9496	-281	9496	281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATCCTCAAAAGTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	108787370	108794818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ENSMUSG00000013495.16_108791001_108794537_1	chr5	+	1117	4	ISM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	13126	0	13126	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCAGTGAAGGGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	108791000	108794537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108791070_108792033_108792113_108792422_108792559_108793704
ENSMUSG00000013539.15_18119087_18125904_1	chr16	-	660	4	ISM	ENSMUSG00000013539.15	ENSMUST00000231605.2	744	7	35866	-155	16415	155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGAACACACAGACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	18125904	18119086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833
ENSMUSG00000013539.15_18119316_18134547_1	chr16	-	704	7	ISM	ENSMUSG00000013539.15	ENSMUST00000115628.10	1622	9	27359	625	7772	-24	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCACACTACAGAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	18134547	18119315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509
ENSMUSG00000013539.15_18119316_18142315_1	chr16	-	509	5	NNC	ENSMUSG00000013539.15	novel	692	6	NA	NA	4	-24	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	873	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCACACTACAGAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	18142315	18119315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_18119417_18120550_18120655_18130502_18130623_18134509_18134599_18142220
ENSMUSG00000013539.15_18119316_18142315_2	chr16	-	504	5	NNC	ENSMUSG00000013539.15	novel	692	6	NA	NA	4	-24	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCACACTACAGAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	18142315	18119315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_18119417_18120549_18120655_18130508_18130623_18134509_18134599_18142220
ENSMUSG00000013539.15_18119316_18142315_3	chr16	-	510	5	ISM	ENSMUSG00000013539.15	ENST00000420290.6	572	6	19482	24	4	-24	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCACACTACAGAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	18142315	18119315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18119417_18120549_18120655_18130502_18130623_18134509_18134599_18142220
ENSMUSG00000013539.15_18119316_18161796_1	chr16	-	772	8	FSM	ENSMUSG00000013539.15	ENST00000432883.5	797	8	1	24	1	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCACACTACAGAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	18161796	18119315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18130502_18130623_18134509_18134599_18142220_18142315_18161758
ENSMUSG00000013539.15_18119316_18161796_2	chr16	-	547	6	FSM	ENSMUSG00000013539.15	ENST00000420290.6	572	6	1	24	1	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCACACTACAGAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	18161796	18119315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_18119417_18120549_18120655_18130502_18130623_18134509_18134599_18142220_18142315_18161758
ENSMUSG00000013539.15_18120550_18142314_1	chr16	-	748	7	ISM	ENSMUSG00000013539.15	ENSMUST00000115628.10	1622	9	19592	1859	5	-1258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGGATTGGGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	18142314	18120549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220
ENSMUSG00000013539.15_18121547_18161796_1	chr16	-	681	7	ISM	ENSMUSG00000013539.15	ENSMUST00000115628.10	1622	9	110	2856	1	-2255	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGAGCAAGACCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	18161796	18121546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161758
ENSMUSG00000013593.13_171062422_171064270_1	chr1	-	473	4	ISM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	10421	0	10421	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTAATGTGTCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	171064270	171062421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174
ENSMUSG00000013593.13_171062524_171064819_1	chr1	-	482	5	ISM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	9872	102	9872	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACGTGCACGTGCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	171064819	171062523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708
ENSMUSG00000013593.13_171062589_171064234_1	chr1	-	455	3	ISM	ENSMUSG00000013593.13	ENST00000679176.1	1978	12	10648	146	10457	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCTGCTCCTTCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	171064234	171062588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171062900_171063925_171064010_171064174
ENSMUSG00000013593.13_171062598_171065577_1	chr1	-	491	6	ISM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	9114	176	9114	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGCCTGTCAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	171065577	171062597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513
ENSMUSG00000013593.13_171062658_171064270_1	chr1	-	422	3	ISM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	10421	236	10421	-215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACCCAGGATATTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	171064270	171062657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171062900_171063925_171064010_171064174
ENSMUSG00000013593.13_171063925_171065941_1	chr1	-	517	5	ISM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	8750	1503	8750	-1482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACAATCCCAGTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	171065941	171063924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855
ENSMUSG00000013593.13_171064174_171066161_1	chr1	-	511	5	ISM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	8530	1752	8530	-1731	internal_fragment	FALSE	canonical	NA	NA	NA	NA	752	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGGGGCGGGGGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	171066161	171064173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066083
ENSMUSG00000013593.13_171064714_171066363_1	chr1	-	494	5	ISM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	8328	2292	8328	-2271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTTGGCCTCAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	171066363	171064713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278
ENSMUSG00000013593.13_171065604_171066895_1	chr1	-	435	5	ISM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	7796	3182	7796	-3161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGACTTGCGGAAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	171066895	171065603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171065634_171065855_171065942_171066083_171066162_171066278_171066467_171066842
ENSMUSG00000013593.13_171065918_171068566_1	chr1	-	462	5	ISM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	6125	3496	6125	-3475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAATAGGACAGTCGACAT	NA	NA	NA	NA	NA	NA	NA	NA	171068566	171065917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515
ENSMUSG00000013593.13_171066089_171068645_1	chr1	-	512	4	ISM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	6046	3667	6046	-3646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGTGAGACAGAACTCG	NA	NA	NA	NA	NA	NA	NA	NA	171068645	171066088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171066162_171066278_171066467_171066842_171066964_171068515
ENSMUSG00000013593.13_171066912_171074691_1	chr1	-	479	4	ISM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	0	4490	0	-4469	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTATTCGATAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	171074691	171066911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171066964_171068515_171068707_171073659_171073767_171074562
ENSMUSG00000013622.16_31206066_31206925_1	chr5	+	155	2	ISM	ENSMUSG00000013622.16	ENSMUST00000013766.13	966	7	87	5042	-63	-4812	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGGAGGAGAAGACATCC	NA	NA	NA	NA	NA	NA	NA	NA	31206065	31206925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31206101_31206805
ENSMUSG00000013646.18_58222386_58237249_1	chr11	+	1326	6	ISM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	810	1302	810	-1302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATGGGCAATCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	58222385	58237249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ENSMUSG00000013646.18_58222474_58237328_1	chr11	+	1317	6	ISM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	898	1223	898	-1223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGGATCAGCTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	58222473	58237328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ENSMUSG00000013646.18_58222536_58237401_1	chr11	+	1328	6	ISM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	960	1150	960	-1150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTTACCCACCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	58222535	58237401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ENSMUSG00000013646.18_58236138_58237972_1	chr11	+	1391	2	ISM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	14562	579	14562	-579	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTGAGACCTTGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	58236137	58237972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_58236312_58236755
ENSMUSG00000013662.7_32650335_32654214_1	chr19	-	1528	2	ISM	ENSMUSG00000013662.7	ENST00000308448.11	3161	10	35313	553	35313	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAGCAAGCTGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	32654214	32650334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_32651765_32654116
ENSMUSG00000013662.7_32650651_32675873_1	chr19	-	1530	6	ISM	ENSMUSG00000013662.7	ENST00000308448.11	3161	10	13654	869	13654	-429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTTGATGCTATGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	32675873	32650650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839
ENSMUSG00000013662.7_32650860_32678993_1	chr19	-	1562	7	ISM	ENSMUSG00000013662.7	ENST00000308448.11	3161	10	10534	1078	10534	-638	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAACTGTATTAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	32678993	32650859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919
ENSMUSG00000013662.7_32661408_32689414_1	chr19	-	925	8	ISM	ENSMUSG00000013662.7	ENST00000308448.11	3161	10	113	11626	113	-8550	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATGTAAGTAGAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	32689414	32661407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689327
ENSMUSG00000013698.13_172026213_172034264_1	chr1	-	476	4	FSM	ENSMUSG00000013698.13	ENSMUST00000013842.12	2501	4	107	1918	107	-1918	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCACCAAAGAAGGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	172034264	172026212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_172026258_172026677_172026834_172027974_172028149_172034163
ENSMUSG00000013701.14_31902119_31923655_1	chr14	-	967	7	NNC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	148	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTATCTCCATTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	31923655	31902118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_31902628_31911106_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ENSMUSG00000013701.14_31902119_31923655_2	chr14	-	973	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	200	0	148	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTATCTCCATTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	31923655	31902118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ENSMUSG00000013701.14_31902119_31923785_1	chr14	-	1097	7	NNC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTATCTCCATTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	31923785	31902118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920931_31920985_31923599
ENSMUSG00000013701.14_31902119_31923785_2	chr14	-	1096	7	NNC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTATCTCCATTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	31923785	31902118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923606
ENSMUSG00000013701.14_31902119_31923785_3	chr14	-	1098	7	NNC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTATCTCCATTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	31923785	31902118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_31902628_31911100_31911212_31913298_31913358_31915364_31915445_31915810_31915905_31920925_31920985_31923599
ENSMUSG00000013701.14_31902119_31923803_1	chr14	-	1115	7	NNC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTATCTCCATTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	31923803	31902118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_31902628_31911106_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ENSMUSG00000013736.17_106746174_106756349_1	chr6	+	1329	8	ISM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	47	3086	47	1707	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGGATGGAAAAAGATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	106746173	106756349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146
ENSMUSG00000013736.17_106750243_106758832_1	chr6	+	1418	7	ISM	ENSMUSG00000013736.17	ENSMUST00000113249.8	1614	9	4141	0	4116	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAATAGTAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	106750242	106758832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ENSMUSG00000013736.17_106751388_106758999_1	chr6	+	1367	6	ISM	ENSMUSG00000013736.17	ENSMUST00000113249.8	1614	9	5286	-167	5261	167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATATATGTGTTTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	106751387	106758999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ENSMUSG00000013736.17_106751455_106759034_1	chr6	+	1335	6	ISM	ENSMUSG00000013736.17	ENSMUST00000113249.8	1614	9	5353	-202	5328	202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCATCTTTGGACATTT	NA	NA	NA	NA	NA	NA	NA	NA	106751454	106759034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ENSMUSG00000013736.17_106755747_106759435_1	chr6	+	1366	3	ISM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	9620	0	9620	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCGTTATTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	106755746	106759435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_106756003_106756146_106756429_106758607
ENSMUSG00000013787.16_35125387_35133020_1	chr17	+	2314	16	ISM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	7440	7	7440	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAACTGTCTGGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	35125386	35133020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ENSMUSG00000013822.8_22024605_22028468_1	chr9	-	570	3	FSM	ENSMUSG00000013822.8	ENSMUST00000013966.8	888	3	0	318	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCAGCCCCCACCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	22028468	22024604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_22024976_22025103_22025240_22028405
ENSMUSG00000013833.16_79731159_79732315_1	chr10	-	304	3	ISM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	12417	390	11152	-49	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGCTGTGGCGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	79732315	79731158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79731245_79731460_79731545_79732181
ENSMUSG00000013833.16_79731217_79743368_1	chr10	-	432	5	FSM	ENSMUSG00000013833.16	ENST00000269814.8	638	5	99	107	99	-107	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAACAAGACAACCGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	79743368	79731216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_79731260_79739195_79739263_79742598_79742769_79742872_79742981_79743324
ENSMUSG00000013833.16_79732650_79734096_1	chr10	-	297	3	ISM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	10636	1881	9371	-1540	internal_fragment	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCAGGACAGCATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	79734096	79732649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79732786_79733398_79733533_79734069
ENSMUSG00000013833.16_79734729_79735109_1	chr10	-	284	2	ISM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	9623	3960	8358	-3619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCTGACAGGTGGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	79735109	79734728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79734938_79735034
ENSMUSG00000013833.16_79735160_79738308_1	chr10	-	292	3	ISM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	6424	4391	5159	-4050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGCGCTCGCTGGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	79738308	79735159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79735244_79735930_79736087_79738256
ENSMUSG00000013833.16_79736038_79738964_1	chr10	-	289	3	ISM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	5768	5269	4503	-4928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGACCTGGACCGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	79738964	79736037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79736087_79738256_79738363_79738830
ENSMUSG00000013846.11_66975047_66980154_1	chr15	-	3730	2	ISM	ENSMUSG00000013846.11	ENSMUST00000092640.6	4985	6	5687	323	5687	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACCCTAGTAGGTAGACA	NA	NA	NA	NA	NA	NA	NA	NA	66980154	66975046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_66978680_66980057
ENSMUSG00000013846.11_66975453_66984438_1	chr15	-	3732	5	ISM	ENSMUSG00000013846.11	ENSMUST00000092640.6	4985	6	1403	729	1403	-729	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCATCAGCTCTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	66984438	66975452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_66978680_66980057_66980178_66981454_66981501_66983080_66983261_66984279
ENSMUSG00000013858.15_79812952_79815215_1	chr10	-	1537	9	ISM	ENSMUSG00000013858.15	ENSMUST00000052885.14	2225	11	4949	0	4840	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGTAGTTCCTCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	79815215	79812951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124
ENSMUSG00000013858.15_79813192_79815432_1	chr10	-	1409	10	ISM	ENSMUSG00000013858.15	ENSMUST00000052885.14	2225	11	4732	240	4623	135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGAGAGGGGCTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	79815432	79813191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329
ENSMUSG00000013858.15_79813327_79819874_1	chr10	-	1560	11	FSM	ENSMUSG00000013858.15	ENSMUST00000052885.14	2225	11	290	375	181	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTACCCCGGACAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	79819874	79813326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
ENSMUSG00000013858.15_79813327_79819992_1	chr10	-	1572	10	NNC	ENSMUSG00000013858.15	novel	1641	10	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTACCCCGGACAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	79819992	79813326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_79813688_79814021_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815219_79815329_79815588_79819743
ENSMUSG00000013858.15_79813327_79819992_2	chr10	-	1577	10	NNC	ENSMUSG00000013858.15	novel	1641	10	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTACCCCGGACAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	79819992	79813326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_79813688_79814021_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815330_79815588_79819743
ENSMUSG00000013858.15_79813327_79819992_3	chr10	-	1576	10	NNC	ENSMUSG00000013858.15	novel	1641	10	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTACCCCGGACAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	79819992	79813326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_79813688_79814021_79814155_79814225_79814310_79814381_79814440_79814528_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
ENSMUSG00000013858.15_79813327_79820052_1	chr10	-	1638	10	FSM	ENSMUSG00000013858.15	ENST00000333175.9	1641	10	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTACCCCGGACAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	79820052	79813326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_79813688_79814021_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
ENSMUSG00000013878.19_26610508_26632676_1	chr8	+	2433	7	ISM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	1112	1223	1004	-1223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATTAGCTGCCAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	26610507	26632676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
ENSMUSG00000013878.19_26615962_26632883_1	chr8	+	2385	5	ISM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	6566	1016	6458	-1016	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGTGAAACCTTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	26615961	26632883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
ENSMUSG00000013878.19_26629061_26633159_1	chr8	+	2379	2	ISM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	19665	740	19557	-740	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTCATCACCAACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	26629060	26633159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26629119_26630838
ENSMUSG00000013921.16_30002865_30007352_1	chr7	+	1458	5	ISM	ENSMUSG00000013921.16	ENSMUST00000014065.16	3300	14	11687	440	11687	-440	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACCAGGAGACCCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	30002864	30007352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30002939_30003032_30003157_30003336_30003402_30005183_30005257_30006230
ENSMUSG00000013973.13_171157178_171166445_1	chr1	+	560	4	ISM	ENSMUSG00000013973.13	ENST00000458050.6	2259	6	-5	3454	-5	-2739	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGAGCCCTCAGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	171157177	171166445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171157261_171158820_171158854_171165819_171166209_171166390
ENSMUSG00000013973.13_171165918_171167863_1	chr1	+	502	3	ISM	ENSMUSG00000013973.13	ENSMUST00000097467.8	1606	5	6924	1321	6924	-1321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAAGTCGGTGACACCAG	NA	NA	NA	NA	NA	NA	NA	NA	171165917	171167863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171166209_171166390_171166499_171167760
ENSMUSG00000013973.13_171166057_171168517_1	chr1	+	529	4	ISM	ENSMUSG00000013973.13	ENSMUST00000097467.8	1606	5	7063	667	7063	-667	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCAAGTCCCGGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	171166056	171168517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUSG00000013973.13_171166410_171168687_1	chr1	+	528	3	ISM	ENSMUSG00000013973.13	ENSMUST00000097467.8	1606	5	7416	497	7416	-497	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGGTGAACGTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	171166409	171168687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171166499_171167760_171167908_171168395
ENSMUSG00000013973.13_171167816_171168814_1	chr1	+	511	2	ISM	ENSMUSG00000013973.13	ENSMUST00000097467.8	1606	5	8822	370	8822	-370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGGAGCTGACATACTG	NA	NA	NA	NA	NA	NA	NA	NA	171167815	171168814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171167908_171168395
ENSMUSG00000013973.13_171167874_171168857_1	chr1	+	496	2	ISM	ENSMUSG00000013973.13	ENSMUST00000097467.8	1606	5	8880	327	8880	-327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAACCAATCACACCGCC	NA	NA	NA	NA	NA	NA	NA	NA	171167873	171168857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171167908_171168395
ENSMUSG00000013997.11_171169314_171173196_1	chr1	-	1848	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111289.8	3041	7	18	1175	0	383	multi-exon	FALSE	canonical	NA	NA	NA	NA	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGAGAGGAGCAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	171173196	171169313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173103
ENSMUSG00000013997.11_171169812_171173196_1	chr1	-	1312	7	NNC	ENSMUSG00000013997.11	novel	1335	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	785	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	171173196	171169811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_171170366_171171005_171171132_171171261_171171390_171171631_171171736_171171855_171172108_171172481_171172569_171173135
ENSMUSG00000013997.11_171171716_171172833_1	chr1	-	326	3	ISM	ENSMUSG00000013997.11	ENST00000368007.8	1703	6	364	2019	363	-1904	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGGCGGTTTCCACGAG	NA	NA	NA	NA	NA	NA	NA	NA	171172833	171171715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171171736_171171855_171172108_171172779
ENSMUSG00000013997.11_171172011_171173050_1	chr1	-	368	2	ISM	ENSMUSG00000013997.11	ENST00000368007.8	1703	6	147	2314	146	-2199	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGAGTTGGTTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	171173050	171172010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171172108_171172779
ENSMUSG00000014030.16_44609714_44692034_1	chr4	-	694	5	NNC	ENSMUSG00000014030.16	novel	745	6	NA	NA	18374	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATACCTAGATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	44692034	44609713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_44609838_44645547_44645724_44679439_44679569_44682668_44682734_44691834
ENSMUSG00000014030.16_44609714_44710408_1	chr4	-	745	6	FSM	ENSMUSG00000014030.16	ENST00000523145.5	745	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATACCTAGATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	44710408	44609713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_44609845_44645547_44645724_44679439_44679569_44682668_44682734_44691834_44692033_44710362
ENSMUSG00000014039.19_97595376_97619544_1	chr16	-	2556	17	ISM	ENSMUSG00000014039.19	ENST00000269844.5	3856	24	33572	0	32883	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGCAGAATAGGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	97619544	97595375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411
ENSMUSG00000014039.19_97595506_97623083_1	chr16	-	2539	18	ISM	ENSMUSG00000014039.19	ENST00000269844.5	3856	24	30033	130	29344	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCACTCACCTGGCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	97623083	97595505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967
ENSMUSG00000014039.19_97595583_97623169_1	chr16	-	2548	18	ISM	ENSMUSG00000014039.19	ENST00000269844.5	3856	24	29947	207	29258	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTGGCCCACTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	97623169	97595582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967
ENSMUSG00000014039.19_97595718_97636871_1	chr16	-	2650	20	ISM	ENSMUSG00000014039.19	ENST00000269844.5	3856	24	16245	342	15556	-342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCCTGATCGCCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	97636871	97595717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777
ENSMUSG00000014039.19_97596923_97637032_1	chr16	-	2599	19	ISM	ENSMUSG00000014039.19	ENST00000269844.5	3856	24	16084	1547	15395	-1547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCGAAAAGGAGCCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	97637032	97596922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777
ENSMUSG00000014039.19_97598905_97638878_1	chr16	-	2557	19	ISM	ENSMUSG00000014039.19	ENST00000269844.5	3856	24	14238	3529	13549	-3529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCCAGGTAAGCAGCGTA	NA	NA	NA	NA	NA	NA	NA	NA	97638878	97598904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773
ENSMUSG00000014039.19_97600378_97639061_1	chr16	-	2543	18	ISM	ENSMUSG00000014039.19	ENST00000269844.5	3856	24	14055	5002	13366	-5002	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCTTCAGAAACACGTCC	NA	NA	NA	NA	NA	NA	NA	NA	97639061	97600377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773
ENSMUSG00000014039.19_97604972_97652811_1	chr16	-	2547	18	ISM	ENSMUSG00000014039.19	ENST00000269844.5	3856	24	305	9596	239	-9596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTCACCGCAAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	97652811	97604971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97639112_97640454_97640533_97652737
ENSMUSG00000014075.16_32238613_32247691_1	chr16	+	449	4	FSM	ENSMUSG00000014075.16	ENSMUST00000080316.8	720	4	49	222	49	-222	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTGGCACTTTGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	32238612	32247691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_32238746_32241637_32241772_32245675_32245740_32247573
ENSMUSG00000014075.16_32244096_32247636_1	chr16	+	160	3	ISM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	5576	281	5532	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTCAAGGAACCTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	32244095	32247636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_32244129_32245675_32245740_32247573
ENSMUSG00000014077.14_119378178_119411237_1	chr2	+	565	5	ISM	ENSMUSG00000014077.14	ENSMUST00000014221.13	2609	7	0	6271	0	-6259	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGGGAAAGTTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	119378177	119411237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119378399_119391211_119391285_119397130_119397212_119402248_119402377_119411175
ENSMUSG00000014077.14_119378293_119415133_1	chr2	+	573	6	FSM	ENSMUSG00000014077.14	ENSMUST00000119172.2	3027	6	91	2363	91	-2363	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCCTTTTGACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	119378292	119415133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_119378399_119391211_119391285_119397130_119397212_119402248_119402377_119411175_119411238_119415010
ENSMUSG00000014077.14_119391235_119415650_1	chr2	+	507	6	ISM	ENSMUSG00000014077.14	ENSMUST00000014221.13	2609	7	13057	1858	13033	-1846	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAATTATTCTTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	119391234	119415650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119391285_119397130_119397212_119402248_119402377_119411175_119411238_119415010_119415134_119415587
ENSMUSG00000014077.14_119415054_119416014_1	chr2	+	507	2	ISM	ENSMUSG00000014077.14	ENSMUST00000014221.13	2609	7	36876	1494	36852	-1482	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACCTTGTGTCCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	119415053	119416014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119415134_119415587
ENSMUSG00000014177.11_62770281_62785394_1	chr11	+	1167	7	FSM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	0	617	0	-617	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTTAGACTTGTATAAG	NA	NA	NA	NA	NA	NA	NA	NA	62770280	62785394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_62770422_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ENSMUSG00000014177.11_62770316_62785443_1	chr11	+	1181	7	FSM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	35	568	35	-568	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTGATTTCTAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	62770315	62785443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_62770422_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ENSMUSG00000014177.11_62772760_62785633_1	chr11	+	1268	6	ISM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	2479	378	2479	-378	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTACCTTTTAATAAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	62772759	62785633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ENSMUSG00000014177.11_62775900_62785823_1	chr11	+	1229	4	ISM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	5619	188	5619	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTATTGTAGGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	62775899	62785823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62775992_62777014_62777147_62782767_62782897_62784947
ENSMUSG00000014177.11_62782767_62786012_1	chr11	+	1195	2	ISM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	12486	-1	12486	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGTGTGGTCCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	62782766	62786012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62782897_62784947
ENSMUSG00000014195.17_100473644_100510994_1	chr11	-	2325	14	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1599	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	100510994	100473643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482242_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ENSMUSG00000014195.17_100473644_100510994_2	chr11	-	2324	14	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	100510994	100473643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490016_100490136_100492553_100492643_100510353
ENSMUSG00000014195.17_100473644_100510994_3	chr11	-	2325	14	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	100510994	100473643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492638_100510353
ENSMUSG00000014195.17_100473644_100510994_4	chr11	-	2324	14	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1830	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	100510994	100473643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487061_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ENSMUSG00000014195.17_100473644_100510994_5	chr11	-	2325	14	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	100510994	100473643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480811_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ENSMUSG00000014195.17_100473678_100492644_1	chr11	-	1673	13	ISM	ENSMUSG00000014195.17	ENST00000674233.1	1716	14	17801	-47	-2506	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGAAAAAGAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	100492644	100473677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475361_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553
ENSMUSG00000014195.17_100473877_100510423_1	chr11	-	1542	14	FSM	ENSMUSG00000014195.17	ENST00000674233.1	1716	14	22	152	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGAGTGTGGACAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	100510423	100473876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475361_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ENSMUSG00000014195.17_100473925_100483757_1	chr11	-	852	8	ISM	ENSMUSG00000014195.17	ENST00000589576.6	1397	11	6381	186	6381	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGGCCAACTACTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	100483757	100473924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475863_100481712_100481878_100482237_100482392_100483680
ENSMUSG00000014195.17_100475134_100489502_1	chr11	-	833	8	ISM	ENSMUSG00000014195.17	ENST00000589576.6	1397	11	636	1395	636	-1209	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGGAGAGGCCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	100489502	100475133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100475190_100475377_100475525_100475807_100475863_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440
ENSMUSG00000014195.17_100475441_100490080_1	chr11	-	836	8	ISM	ENSMUSG00000014195.17	ENST00000589576.6	1397	11	58	1702	58	-1516	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGCCTCTGAGGACGAG	NA	NA	NA	NA	NA	NA	NA	NA	100490080	100475440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100475525_100475807_100475863_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010
ENSMUSG00000014226.11_160029937_160040379_1	chr1	-	2026	6	NNC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3955	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAAAAAAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	160040379	160029936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_160031294_160032537_160032630_160033665_160033766_160034182_160034280_160035948_160036166_160040216
ENSMUSG00000014226.11_160029937_160040379_2	chr1	-	2023	6	NNC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3980	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAAAAAAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	160040379	160029936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035957_160036166_160040216
ENSMUSG00000014232.15_3726903_3758875_1	chr16	+	1429	12	FSM	ENSMUSG00000014232.15	ENSMUST00000040881.14	1779	12	214	136	-69	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCTGGGCTTAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	3726902	3758875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
ENSMUSG00000014232.15_3726970_3737402_1	chr16	+	579	6	ISM	ENSMUSG00000014232.15	ENST00000341633.9	1417	13	-2	21473	-2	-21473	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGATTGCAATCAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	3726969	3737402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344
ENSMUSG00000014232.15_3729315_3741720_1	chr16	+	574	6	ISM	ENSMUSG00000014232.15	ENST00000341633.9	1417	13	2343	17155	2343	-17155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGACCTGCTTAATAATG	NA	NA	NA	NA	NA	NA	NA	NA	3729314	3741720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703
ENSMUSG00000014232.15_3729315_3759011_1	chr16	+	1450	11	ISM	ENSMUSG00000014232.15	ENSMUST00000040881.14	1779	12	2626	0	2343	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGCTGCTATTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	3729314	3759011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
ENSMUSG00000014232.15_3731208_3746400_1	chr16	+	567	6	ISM	ENSMUSG00000014232.15	ENST00000341633.9	1417	13	4236	12475	4236	-12475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTATGACGTCTATCTA	NA	NA	NA	NA	NA	NA	NA	NA	3731207	3746400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353
ENSMUSG00000014232.15_3733389_3747754_1	chr16	+	585	6	ISM	ENSMUSG00000014232.15	ENST00000341633.9	1417	13	6417	11121	6417	-11121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGACTGCTCAAGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	3733388	3747754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703
ENSMUSG00000014232.15_3735688_3751678_1	chr16	+	639	6	ISM	ENSMUSG00000014232.15	ENST00000341633.9	1417	13	8716	7197	8716	-7197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTAACTCCTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	3735687	3751678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570
ENSMUSG00000014232.15_3737344_3755775_1	chr16	+	656	7	ISM	ENSMUSG00000014232.15	ENST00000341633.9	1417	13	10372	3100	10372	-3100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTACTTTGCTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	3737343	3755775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3755717
ENSMUSG00000014232.15_3741765_3758698_1	chr16	+	576	7	ISM	ENSMUSG00000014232.15	ENST00000341633.9	1417	13	14793	177	14793	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTGCTCTCTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	3741764	3758698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3755717_3755775_3758631
ENSMUSG00000014232.15_3746352_3758875_1	chr16	+	682	6	ISM	ENSMUSG00000014232.15	ENST00000341633.9	1417	13	19380	0	19380	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCTGGGCTTAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	3746351	3758875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3755717_3755775_3758631
ENSMUSG00000014245.9_62349286_62403866_1	chr11	+	765	6	FSM	ENSMUSG00000014245.9	ENST00000395844.8	745	6	-19	-1	0	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	2508	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAGAGCAAGAAGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	62349285	62403866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62402963_62403098_62403729
ENSMUSG00000014294.5_36875385_36877610_1	chr18	-	567	3	NNC	ENSMUSG00000014294.5	novel	572	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGATGTCGTACGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	36877610	36875384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_36875712_36877233_36877341_36877477
ENSMUSG00000014313.16_35932122_35937362_1	chr15	-	313	3	FSM	ENSMUSG00000014313.16	ENSMUST00000153512.2	738	3	429	-4	429	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTTGGTTATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	35937362	35932121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_35932244_35935430_35935560_35937300
ENSMUSG00000014313.16_35932146_35937430_1	chr15	-	357	3	FSM	ENSMUSG00000014313.16	ENSMUST00000153512.2	738	3	361	20	361	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGTAATTATATGGACA	NA	NA	NA	NA	NA	NA	NA	NA	35937430	35932145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_35932244_35935430_35935560_35937300
ENSMUSG00000014313.16_35935431_35938392_1	chr15	-	381	3	ISM	ENSMUSG00000014313.16	ENSMUST00000014457.15	503	4	0	3309	0	-3285	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTACAGTTACTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	35938392	35935430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_35935560_35937300_35937431_35938270
ENSMUSG00000014355.11_128517739_128524761_1	chr2	-	617	7	ISM	ENSMUSG00000014355.11	ENST00000616781.4	1276	9	3220	148	3220	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACATCTCAGAAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	128524761	128517738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522386_128524693
ENSMUSG00000014355.11_128517794_128524807_1	chr2	-	608	7	ISM	ENSMUSG00000014355.11	ENST00000616781.4	1276	9	3174	203	3174	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCCCTGAGCAGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	128524807	128517793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522386_128524693
ENSMUSG00000014355.11_128518104_128526485_1	chr2	-	637	7	ISM	ENSMUSG00000014355.11	ENST00000616781.4	1276	9	1496	513	1496	-513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGACCCCTCCATTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	128526485	128518103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522386_128524693_128524873_128526421
ENSMUSG00000014355.11_128521474_128527801_1	chr2	-	621	6	ISM	ENSMUSG00000014355.11	ENST00000616781.4	1276	9	180	3883	180	-3883	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTCACATGAGGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	128527801	128521473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_128521523_128522028_128522130_128522313_128522386_128524693_128524873_128526421_128526584_128527743
ENSMUSG00000014355.11_128522116_128527936_1	chr2	-	620	5	ISM	ENSMUSG00000014355.11	ENST00000616781.4	1276	9	45	4525	45	-4525	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATGCATATGTATATT	NA	NA	NA	NA	NA	NA	NA	NA	128527936	128522115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_128522130_128522313_128522386_128524693_128524873_128526421_128526584_128527743
ENSMUSG00000014361.6_128571264_128600998_1	chr2	+	765	6	ISM	ENSMUSG00000014361.6	ENST00000616902.4	2438	16	38	35479	38	-35479	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTTTTAATACCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	128571263	128600998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_128571515_128578482_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962
ENSMUSG00000014361.6_128571288_128601079_1	chr2	+	822	6	ISM	ENSMUSG00000014361.6	ENST00000616902.4	2438	16	62	35398	62	-35398	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTCGGAATGAGATTGG	NA	NA	NA	NA	NA	NA	NA	NA	128571287	128601079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_128571515_128578482_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962
ENSMUSG00000014361.6_128571453_128604049_1	chr2	+	777	7	ISM	ENSMUSG00000014361.6	ENST00000616902.4	2438	16	227	32428	227	-32428	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGATATTAGATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	128571452	128604049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_128571515_128578482_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962_128601147_128603996
ENSMUSG00000014361.6_128578568_128613313_1	chr2	+	776	7	ISM	ENSMUSG00000014361.6	ENST00000616902.4	2438	16	7342	23164	7342	-23164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTCCAAATCCACAATG	NA	NA	NA	NA	NA	NA	NA	NA	128578567	128613313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962_128601147_128603996_128604149_128613266
ENSMUSG00000014361.6_128580253_128618064_1	chr2	+	783	7	NIC	ENSMUSG00000014361.6	novel	2438	16	NA	NA	9027	-18413	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGCTCAGAATCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	128580252	128618064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_128580290_128592019_128592107_128593826_128593943_128600962_128601147_128603996_128604149_128613266_128613421_128618011
ENSMUSG00000014361.6_128593913_128618270_1	chr2	+	779	5	NIC	ENSMUSG00000014361.6	novel	2438	16	NA	NA	22687	-18207	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGCTGCTTCTGTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	128593912	128618270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_128593943_128600962_128601147_128603996_128604149_128613266_128613421_128618011
ENSMUSG00000014361.6_128601070_128619382_1	chr2	+	781	5	NIC	ENSMUSG00000014361.6	novel	2438	16	NA	NA	29844	-17095	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTCCTTCTGCCGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	128601069	128619382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_128601147_128603996_128604149_128613266_128613421_128618011_128618360_128619332
ENSMUSG00000014361.6_128604091_128621754_1	chr2	+	789	6	ISM	ENSMUSG00000014361.6	ENST00000616902.4	2438	16	32865	14723	32865	-14723	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGACTTCTCAGAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	128604090	128621754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_128604149_128613266_128613425_128618011_128618360_128619332_128619419_128620834_128620931_128621711
ENSMUSG00000014361.6_128613233_128624503_1	chr2	+	864	6	ISM	ENSMUSG00000014361.6	ENST00000616902.4	2438	16	42007	11974	42007	-11974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAACCACCCAAATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	128613232	128624503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_128613425_128618011_128618360_128619332_128619419_128620834_128620931_128621711_128621793_128624442
ENSMUSG00000014361.6_128618087_128632217_1	chr2	+	797	6	ISM	ENSMUSG00000014361.6	ENST00000616902.4	2438	16	46861	4260	46861	-4260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGGATTTGGCAGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	128618086	128632217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_128618360_128619332_128619419_128620834_128620931_128621711_128621793_128624442_128624536_128632049
ENSMUSG00000014361.6_128618189_128634919_1	chr2	+	778	7	ISM	ENSMUSG00000014361.6	ENST00000616902.4	2438	16	46963	1558	46963	-1558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGTGGTGATTATTACC	NA	NA	NA	NA	NA	NA	NA	NA	128618188	128634919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_128618360_128619332_128619419_128620834_128620931_128621711_128621793_128624442_128624536_128632049_128632247_128634865
ENSMUSG00000014361.6_128618243_128634974_1	chr2	+	779	7	ISM	ENSMUSG00000014361.6	ENST00000616902.4	2438	16	47017	1503	47017	-1503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCCATCGAGAGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	128618242	128634974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_128618360_128619332_128619419_128620834_128620931_128621711_128621793_128624442_128624536_128632049_128632247_128634865
ENSMUSG00000014361.6_128618309_128636391_1	chr2	+	794	8	ISM	ENSMUSG00000014361.6	ENST00000616902.4	2438	16	47083	86	47083	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACACGGGGAATGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	128618308	128636391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_128618360_128619332_128619419_128620834_128620931_128621711_128621793_128624442_128624536_128632049_128632247_128634865_128635026_128636361
ENSMUSG00000014361.6_128619332_128636477_1	chr2	+	830	7	ISM	ENSMUSG00000014361.6	ENST00000616902.4	2438	16	48106	0	48106	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGACTGCTTGGATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	128619331	128636477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_128619419_128620834_128620931_128621711_128621793_128624442_128624536_128632049_128632247_128634865_128635026_128636361
ENSMUSG00000014402.16_46538775_46553299_1	chr7	-	1243	5	ISM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	16418	78	16418	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	46553299	46538774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269
ENSMUSG00000014402.16_46539018_46556832_1	chr7	-	1071	6	ISM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	12885	321	12885	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTAAAGATAAGTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	46556832	46539017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798
ENSMUSG00000014402.16_46539025_46556858_1	chr7	-	1090	6	ISM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	12859	328	12859	-328	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGTAGGTTAAAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	46556858	46539024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798
ENSMUSG00000014402.16_46539055_46556900_1	chr7	-	1102	6	ISM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	12817	358	12817	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTTCATCTTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	46556900	46539054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798
ENSMUSG00000014402.16_46539083_46556908_1	chr7	-	1082	6	ISM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	12809	386	12809	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGGCTTCTCATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	46556908	46539082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798
ENSMUSG00000014402.16_46539137_46556920_1	chr7	-	1040	6	ISM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	12797	440	12797	-440	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTTGCATAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	46556920	46539136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798
ENSMUSG00000014402.16_46539334_46563210_1	chr7	-	1163	9	ISM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	6507	637	6507	-637	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTAAAGCATTCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	46563210	46539333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125
ENSMUSG00000014402.16_46539435_46569617_1	chr7	-	1111	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	100	738	100	-738	multi-exon	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTAAACAGTTCCAGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	46569617	46539434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ENSMUSG00000014402.16_46540670_46569656_1	chr7	-	1132	9	ISM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	61	1973	61	-1973	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACCCTTCCTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	46569656	46540669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ENSMUSG00000014444.18_123208721_123210415_1	chr8	-	1092	7	NNC	ENSMUSG00000014444.18	novel	1154	7	NA	NA	0	-61	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCAGGCCCTGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	123210415	123208720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_123208971_123209086_123209266_123209383_123209468_123209607_123209731_123209795_123209969_123210058_123210151_123210224
ENSMUSG00000014444.18_123208721_123210415_2	chr8	-	1090	7	NNC	ENSMUSG00000014444.18	novel	1154	7	NA	NA	0	-61	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCAGGCCCTGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	123210415	123208720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_123208971_123209086_123209261_123209381_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224
ENSMUSG00000014444.18_123208721_123210415_3	chr8	-	1093	7	FSM	ENSMUSG00000014444.18	ENST00000327397.8	1154	7	0	61	0	-61	multi-exon	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCAGGCCCTGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	123210415	123208720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_123208971_123209086_123209266_123209383_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224
ENSMUSG00000014444.18_123208721_123210415_4	chr8	-	1091	7	NNC	ENSMUSG00000014444.18	novel	1154	7	NA	NA	0	-61	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCAGGCCCTGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	123210415	123208720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_123208971_123209086_123209266_123209383_123209468_123209609_123209731_123209795_123209969_123210057_123210151_123210224
ENSMUSG00000014470.5_123193193_123194730_1	chr8	-	811	2	ISM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	8073	307	8073	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTCTCTTGATGACC	NA	NA	NA	NA	NA	NA	NA	NA	123194730	123193192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123193974_123194700
ENSMUSG00000014470.5_123193326_123195011_1	chr8	-	789	3	ISM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	7792	440	7792	-440	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATTTTTAAAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	123195011	123193325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123193974_123194700_123194809_123194978
ENSMUSG00000014470.5_123193436_123195385_1	chr8	-	794	4	ISM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	7418	550	7418	-550	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATAATCTTTTCATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	123195385	123193435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352
ENSMUSG00000014470.5_123193496_123195429_1	chr8	-	778	4	ISM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	7374	610	7374	-610	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTGGTACTGGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	123195429	123193495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352
ENSMUSG00000014470.5_123193601_123197026_1	chr8	-	797	5	ISM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	5777	715	5777	-715	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGATGAGGTGCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	123197026	123193600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195466_123196938
ENSMUSG00000014470.5_123193601_123197075_1	chr8	-	846	5	ISM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	5728	715	5728	-715	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGATGAGGTGCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	123197075	123193600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195466_123196938
ENSMUSG00000014470.5_123193775_123202673_1	chr8	-	764	6	FSM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	130	889	130	-889	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGGTCTCAGAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	123202673	123193774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195466_123196938_123197096_123202601
ENSMUSG00000014470.5_123193824_123202803_1	chr8	-	845	6	FSM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	0	938	0	-938	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCACAGGAGTGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	123202803	123193823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195466_123196938_123197096_123202601
ENSMUSG00000014470.5_123193857_123202803_1	chr8	-	812	6	FSM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	0	971	0	-971	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGGATAGGGCTGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	123202803	123193856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195466_123196938_123197096_123202601
ENSMUSG00000014496.9_31421996_31427275_1	chr14	-	1910	3	ISM	ENSMUSG00000014496.9	ENST00000683139.1	7519	29	76390	1271	75075	-1271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACGTGAGCTGTATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	31427275	31421995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31422564_31422975_31424264_31427221
ENSMUSG00000014496.9_31422249_31430026_1	chr14	-	1928	6	ISM	ENSMUSG00000014496.9	ENST00000683139.1	7519	29	73639	1524	72324	-1524	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATACCCAATTCCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	31430026	31422248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31422564_31422975_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959
ENSMUSG00000014496.9_31422331_31423313_1	chr14	-	571	2	ISM	ENSMUSG00000014496.9	ENST00000683139.1	7519	29	80352	1606	79037	1472	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTTTCCCAGTAACAAT	NA	NA	NA	NA	NA	NA	NA	NA	31423313	31422330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31422564_31422975
ENSMUSG00000014496.9_31422374_31430790_1	chr14	-	1966	7	ISM	ENSMUSG00000014496.9	ENST00000683139.1	7519	29	72875	1649	71560	1429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTTAAATTACACTTT	NA	NA	NA	NA	NA	NA	NA	NA	31430790	31422373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31422564_31422975_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706
ENSMUSG00000014496.9_31422487_31430932_1	chr14	-	1911	8	ISM	ENSMUSG00000014496.9	ENST00000683139.1	7519	29	72733	1762	71418	1316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTAGGTCCTCCTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	31430932	31422486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31422564_31422975_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874
ENSMUSG00000014496.9_31422976_31432831_1	chr14	-	1987	8	ISM	ENSMUSG00000014496.9	ENSMUST00000227863.2	6616	28	69519	2251	69519	827	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAAGACTCTTGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	31432831	31422975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708
ENSMUSG00000014496.9_31423460_31437299_1	chr14	-	1915	11	ISM	ENSMUSG00000014496.9	ENSMUST00000227089.2	3522	28	66573	-343	65051	343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCAGTGCTTCTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	31437299	31423459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190
ENSMUSG00000014496.9_31423522_31437368_1	chr14	-	1922	11	ISM	ENSMUSG00000014496.9	ENSMUST00000227089.2	3522	28	66504	-281	64982	281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATTAGAACTCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	31437368	31423521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190
ENSMUSG00000014496.9_31423803_31449687_1	chr14	-	1975	15	ISM	ENSMUSG00000014496.9	ENSMUST00000227089.2	3522	28	54185	0	52663	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCAAAAGGAACTTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	31449687	31423802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591
ENSMUSG00000014496.9_31424192_31456998_1	chr14	-	1917	19	ISM	ENSMUSG00000014496.9	ENSMUST00000227089.2	3522	28	46874	389	45352	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTGTCTCGTCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	31456998	31424191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928
ENSMUSG00000014496.9_31449601_31465191_1	chr14	-	554	7	ISM	ENSMUSG00000014496.9	ENSMUST00000227089.2	3522	28	38681	25798	37159	-25798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACGGCAAGTAAGTACCAC	NA	NA	NA	NA	NA	NA	NA	NA	31465191	31449600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179
ENSMUSG00000014496.9_31455665_31502890_1	chr14	-	1901	11	ISM	ENSMUSG00000014496.9	ENSMUST00000227863.2	6616	28	-540	34940	-540	-31862	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCAGGAAACTCCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	31502890	31455664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31502121
ENSMUSG00000014496.9_31456963_31502996_1	chr14	-	1914	10	ISM	ENSMUSG00000014496.9	ENSMUST00000227863.2	6616	28	-646	36238	-646	-33160	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTTATTACAAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	31502996	31456962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31502121
ENSMUSG00000014496.9_31458754_31503100_1	chr14	-	1900	9	ISM	ENSMUSG00000014496.9	ENST00000683139.1	7519	29	565	38029	565	-34951	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGATTCTCCAGATCACA	NA	NA	NA	NA	NA	NA	NA	NA	31503100	31458753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31502121
ENSMUSG00000014496.9_31465251_31503210_1	chr14	-	1897	8	ISM	ENSMUSG00000014496.9	ENST00000683139.1	7519	29	455	44526	455	-41448	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGCATCAACACATGGA	NA	NA	NA	NA	NA	NA	NA	NA	31503210	31465250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31502121
ENSMUSG00000014496.9_31465299_31503286_1	chr14	-	1925	8	ISM	ENSMUSG00000014496.9	ENST00000683139.1	7519	29	379	44574	379	-41496	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAATGTCAATCAGAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	31503286	31465298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31502121
ENSMUSG00000014496.9_31467232_31503392_1	chr14	-	1883	7	ISM	ENSMUSG00000014496.9	ENST00000683139.1	7519	29	273	46507	273	-43429	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTAGTGGAATGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	31503392	31467231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31502121
ENSMUSG00000014496.9_31468913_31503718_1	chr14	-	539	6	ISM	ENSMUSG00000014496.9	ENSMUST00000227089.2	3522	28	154	45110	-53	-45110	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGAAAGATAGGCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	31503718	31468912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31503659
ENSMUSG00000014503.16_34545787_34558264_1	chr18	+	756	4	ISM	ENSMUSG00000014503.16	ENST00000508638.5	1990	10	53	17577	53	-16583	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGAACTGGCTGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	34545786	34558264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34545868_34547515_34547773_34549880_34550103_34558068
ENSMUSG00000014503.16_34547550_34560443_1	chr18	+	748	4	ISM	ENSMUSG00000014503.16	ENST00000508638.5	1990	10	1816	15398	1816	-14404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTGACAGCTATCCCG	NA	NA	NA	NA	NA	NA	NA	NA	34547549	34560443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34547773_34549880_34550103_34558068_34558298_34560369
ENSMUSG00000014503.16_34547680_34563780_1	chr18	+	760	5	ISM	ENSMUSG00000014503.16	ENST00000508638.5	1990	10	1946	12061	1946	-11067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATTATTCAATAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	34547679	34563780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34547773_34549880_34550103_34558068_34558298_34560369_34560541_34563735
ENSMUSG00000014503.16_34549951_34571161_1	chr18	+	788	6	ISM	ENSMUSG00000014503.16	ENST00000508638.5	1990	10	4217	4680	4217	-3686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGGCAGAGCAGATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	34549950	34571161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34550103_34558068_34558298_34560369_34560541_34563735_34563838_34566341_34566407_34571092
ENSMUSG00000014503.16_34550022_34571201_1	chr18	+	757	6	ISM	ENSMUSG00000014503.16	ENST00000508638.5	1990	10	4288	4640	4288	-3646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTATTATTCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	34550021	34571201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34550103_34558068_34558298_34560369_34560541_34563735_34563838_34566341_34566407_34571092
ENSMUSG00000014503.16_34550081_34571258_1	chr18	+	755	6	ISM	ENSMUSG00000014503.16	ENST00000508638.5	1990	10	4347	4583	4347	-3589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCGAGAGTAAGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	34550080	34571258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34550103_34558068_34558298_34560369_34560541_34563735_34563838_34566341_34566407_34571092
ENSMUSG00000014503.16_34558176_34575333_1	chr18	+	762	7	ISM	ENSMUSG00000014503.16	ENST00000508638.5	1990	10	12442	508	12442	486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTTCATTCAGTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	34558175	34575333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34558298_34560369_34560541_34563735_34563838_34566341_34566407_34571092_34571268_34571783_34571886_34575308
ENSMUSG00000014503.16_34558222_34575397_1	chr18	+	780	7	ISM	ENSMUSG00000014503.16	ENST00000508638.5	1990	10	12488	444	12488	-444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTAAACAGAAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	34558221	34575397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34558298_34560369_34560541_34563735_34563838_34566341_34566407_34571092_34571268_34571783_34571886_34575308
ENSMUSG00000014503.16_34560469_34575546_1	chr18	+	754	6	ISM	ENSMUSG00000014503.16	ENST00000508638.5	1990	10	14735	295	14735	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCCTTGCCTACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	34560468	34575546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34560541_34563735_34563838_34566341_34566407_34571092_34571268_34571783_34571886_34575308
ENSMUSG00000014503.16_34563808_34575697_1	chr18	+	761	5	ISM	ENSMUSG00000014503.16	ENST00000508638.5	1990	10	18074	144	18074	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGATTTTGAAGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34563807	34575697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34563838_34566341_34566407_34571092_34571268_34571783_34571886_34575308
ENSMUSG00000014503.16_34571093_34575843_1	chr18	+	812	3	ISM	ENSMUSG00000014503.16	ENST00000508638.5	1990	10	25359	-2	25359	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCAAAGTGTGTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	34571092	34575843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34571268_34571783_34571886_34575308
ENSMUSG00000014504.17_34467344_34469278_1	chr18	+	308	3	NNC	ENSMUSG00000014504.17	novel	525	4	NA	NA	3078	-167	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGACGTGGTGTGAACG	NA	NA	NA	NA	NA	NA	NA	NA	34467343	34469278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_34467418_34467509_34467617_34469151
ENSMUSG00000014504.17_34467508_34469398_2	chr18	+	361	2	ISM	ENSMUSG00000014504.17	ENST00000515463.1	525	4	3242	47	3242	-47	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATCAACAGTTAACAATGA	NA	NA	NA	NA	NA	NA	NA	NA	34467507	34469398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_34467622_34469151
ENSMUSG00000014551.9_92151941_92155771_1	chr6	-	418	3	ISM	ENSMUSG00000014551.9	ENSMUST00000140438.2	6073	4	5243	5435	29	71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCATAAATGATGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	92155771	92151940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_92152190_92152689_92152778_92155690
ENSMUSG00000014554.14_83457291_83483803_1	chr6	-	867	7	FSM	ENSMUSG00000014554.14	ENSMUST00000014698.10	1107	7	148	92	117	-92	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGGTGTGTGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	83483803	83457290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
ENSMUSG00000014554.14_83457291_83483808_1	chr6	-	872	7	FSM	ENSMUSG00000014554.14	ENSMUST00000014698.10	1107	7	143	92	112	-92	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGGTGTGTGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	83483808	83457290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
ENSMUSG00000014554.14_83458328_83483807_1	chr6	-	531	4	FSM	ENSMUSG00000014554.14	ENST00000629438.2	644	4	113	0	113	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGTGTAACAGACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	83483807	83458327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_83458445_83463965_83464114_83467402_83467591_83483729
ENSMUSG00000014599.11_107649256_107654452_1	chr3	-	1295	3	ISM	ENSMUSG00000014599.11	ENSMUST00000120654.8	821	6	3843	-1074	3843	-892	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTTCCTGTTGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	107654452	107649255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107650462_107654041_107654101_107654422
ENSMUSG00000014599.11_107649724_107655929_1	chr3	-	1310	4	ISM	ENSMUSG00000014599.11	ENSMUST00000120654.8	821	6	2366	-606	2366	606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCCAGCAGAGGCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	107655929	107649723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107650462_107654041_107654101_107654422_107654476_107655469
ENSMUSG00000014599.11_107650330_107657742_1	chr3	-	1376	5	ISM	ENSMUSG00000014599.11	ENSMUST00000014743.10	4176	9	10043	1966	553	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTTGATGGGGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	107657742	107650329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107650462_107654041_107654101_107654422_107654476_107655469_107656486_107657626
ENSMUSG00000014599.11_107652911_107657694_1	chr3	-	1442	5	ISM	ENSMUSG00000014599.11	ENSMUST00000120243.8	2097	9	9864	0	601	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTGTCCAGTAGACCG	NA	NA	NA	NA	NA	NA	NA	NA	107657694	107652910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107653157_107654041_107654101_107654422_107654476_107655469_107656486_107657626
ENSMUSG00000014599.11_107653032_107657761_1	chr3	-	1388	5	ISM	ENSMUSG00000014599.11	ENSMUST00000120243.8	2097	9	9797	121	534	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGACAGTACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	107657761	107653031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107653157_107654041_107654101_107654422_107654476_107655469_107656486_107657626
ENSMUSG00000014599.11_107654042_107661218_1	chr3	-	1447	5	ISM	ENSMUSG00000014599.11	ENSMUST00000120243.8	2097	9	6340	1131	-2923	-1131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGTTCTGATTTTGATA	NA	NA	NA	NA	NA	NA	NA	NA	107661218	107654041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107654101_107654422_107654476_107655469_107656486_107657626_107657775_107661047
ENSMUSG00000014599.11_107655858_107667537_1	chr3	-	1330	6	ISM	ENSMUSG00000014599.11	ENSMUST00000120243.8	2097	9	21	2947	15	-2947	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGACCACCAGGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	107667537	107655857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107656486_107657626_107657775_107661047_107661219_107662746_107662810_107663932_107664056_107667340
ENSMUSG00000014601.14_107519848_107539010_1	chr3	-	3212	21	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	107539010	107519847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534161_107534251_107534396_107534703_107534779_107535471_107535542_107538816
ENSMUSG00000014601.14_107519848_107539010_10	chr3	-	3210	21	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	107539010	107519847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523081_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ENSMUSG00000014601.14_107519848_107539010_2	chr3	-	3209	21	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	107539010	107519847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533060_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ENSMUSG00000014601.14_107519848_107539010_3	chr3	-	3209	21	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	107539010	107519847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534390_107534703_107534779_107535471_107535542_107538816
ENSMUSG00000014601.14_107519848_107539010_4	chr3	-	3210	21	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	107539010	107519847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528647_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ENSMUSG00000014601.14_107519848_107539010_5	chr3	-	3212	21	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	107539010	107519847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525700_107526222_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ENSMUSG00000014601.14_107519848_107539010_6	chr3	-	3209	21	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	107539010	107519847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531708_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ENSMUSG00000014601.14_107519848_107539010_7	chr3	-	3205	21	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	107539010	107519847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534769_107535471_107535542_107538816
ENSMUSG00000014601.14_107519848_107539010_8	chr3	-	3208	21	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	107539010	107519847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525638_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ENSMUSG00000014601.14_107519848_107539010_9	chr3	-	3209	21	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	107539010	107519847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526293_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ENSMUSG00000014606.15_70535022_70536979_1	chr11	-	1345	7	ISM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	905	0	818	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGTAAAGTCGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	70536979	70535021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901
ENSMUSG00000014606.15_70535022_70537725_1	chr11	-	1552	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	159	0	72	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGTAAAGTCGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	70537725	70535021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ENSMUSG00000014606.15_70535234_70537725_1	chr11	-	1340	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	159	212	72	-212	multi-exon	FALSE	canonical	NA	NA	NA	NA	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGTCAAGATGACAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	70537725	70535233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ENSMUSG00000014606.15_70535234_70537804_1	chr11	-	1419	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	80	212	-7	-212	multi-exon	FALSE	canonical	NA	NA	NA	NA	2146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGTCAAGATGACAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	70537804	70535233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ENSMUSG00000014606.15_70535234_70537804_2	chr11	-	1412	8	NNC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	-7	-212	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGTCAAGATGACAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	70537804	70535233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536362_70536447_70536609_70536817_70536901_70537055_70537593
ENSMUSG00000014606.15_70535234_70537884_1	chr11	-	1499	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	0	212	0	-212	multi-exon	FALSE	canonical	NA	NA	NA	NA	2207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGTCAAGATGACAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	70537884	70535233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ENSMUSG00000014606.15_70535313_70537823_1	chr11	-	1351	8	NNC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	-26	279	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATTCAGGGCACACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	70537823	70535312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536439_70536609_70536817_70536901_70537055_70537593
ENSMUSG00000014609.17_70505027_70509642_1	chr11	-	1585	12	NNC	ENSMUSG00000014609.17	novel	1650	12	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGAATGGTCCCTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	70509642	70505026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_70505260_70505803_70505955_70506033_70506141_70506225_70506413_70506486_70506602_70507780_70507896_70507972_70508174_70508430_70508532_70508980_70509137_70509235_70509346_70509450_70509496_70509578
ENSMUSG00000014633.16_117615424_117648180_1	chr8	-	1439	4	NNC	ENSMUSG00000014633.16	novel	1459	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTTGCAGAGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	117648180	117615423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_117616599_117620826_117620899_117637866_117637974_117648095
ENSMUSG00000014668.16_110294416_110319838_1	chr5	+	2364	12	ISM	ENSMUSG00000014668.16	ENSMUST00000112519.9	3159	18	10701	-1	10690	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	110294415	110319838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ENSMUSG00000014748.14_83746403_83748493_1	chr6	-	1948	2	ISM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	4302	536	4302	-536	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGAGCCACCCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	83748493	83746402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83748286_83748428
ENSMUSG00000014748.14_83746566_83750845_1	chr6	-	2045	4	ISM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	1950	699	1950	-699	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGCTGCCTTCTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	83750845	83746565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691
ENSMUSG00000014748.14_83746682_83752079_1	chr6	-	2009	5	ISM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	716	815	716	-815	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTACTGTCTTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	83752079	83746681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999
ENSMUSG00000014748.14_83746783_83752740_1	chr6	-	2013	6	FSM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	55	916	55	-916	multi-exon	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGCTTCCTGGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	83752740	83746782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752635
ENSMUSG00000014748.14_83746824_83752740_1	chr6	-	1972	6	FSM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	55	957	55	-957	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTCACCGGCTGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	83752740	83746823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752635
ENSMUSG00000014763.9_15616719_15622754_1	chr17	+	852	2	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	255	30946	255	-30946	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGCTTGTCATCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	15616718	15622754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_15616823_15622006
ENSMUSG00000014763.9_15622612_15626090_1	chr17	+	858	2	NNC	ENSMUSG00000014763.9	novel	4420	11	NA	NA	6148	-27610	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAACACCCTGGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	15622611	15626090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_15623396_15626016
ENSMUSG00000014763.9_15623227_15643275_1	chr17	+	850	6	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	6763	10425	6763	-10425	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCTTTTCCATCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	15623226	15643275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_15623392_15626016_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139
ENSMUSG00000014763.9_15626066_15646503_1	chr17	+	869	7	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	9602	7197	9602	-7197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGGGCAGTCATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	15626065	15646503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15643347_15644531_15644641_15646450
ENSMUSG00000014763.9_15634963_15652199_1	chr17	+	870	7	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	18499	1501	18499	-1501	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAGAACACTTGACACTA	NA	NA	NA	NA	NA	NA	NA	NA	15634962	15652199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_15635114_15637894_15637988_15643139_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
ENSMUSG00000014763.9_15643164_15652455_1	chr17	+	858	5	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	26700	1245	26700	-1245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGCCAGGCGAGGACGA	NA	NA	NA	NA	NA	NA	NA	NA	15643163	15652455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
ENSMUSG00000014763.9_15646471_15652772_1	chr17	+	863	3	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	30007	928	30007	-928	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCAACTAAATAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	15646470	15652772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_15646538_15651838_15651891_15652028
ENSMUSG00000014767.18_15723251_15737689_1	chr17	+	1681	7	ISM	ENSMUSG00000014767.18	ENSMUST00000117593.8	2067	10	3029	0	3029	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGCTTGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	15723250	15737689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ENSMUSG00000014769.11_15695981_15719649_1	chr17	-	1069	6	FSM	ENSMUSG00000014769.11	ENSMUST00000232500.2	1435	6	364	2	364	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTTTTTCTTTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	15719649	15695980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15719494
ENSMUSG00000014769.11_15696221_15719714_1	chr17	-	894	6	FSM	ENSMUSG00000014769.11	ENSMUST00000232500.2	1435	6	299	242	299	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	15719714	15696220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15719494
ENSMUSG00000014769.11_15696221_15719789_1	chr17	-	969	6	FSM	ENSMUSG00000014769.11	ENSMUST00000232500.2	1435	6	224	242	224	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	15719789	15696220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15719494
ENSMUSG00000014769.11_15696364_15710433_1	chr17	-	227	3	ISM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	8127	1081	8127	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACTGGAGATGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	15710433	15696363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_15696468_15697576_15697684_15710417
ENSMUSG00000014769.11_15696417_15710487_1	chr17	-	228	3	ISM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	8073	1134	8073	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCATGAGGCTGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	15710487	15696416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_15696468_15697576_15697684_15710417
ENSMUSG00000014771.14_15741855_15745572_1	chr17	-	461	4	ISM	ENSMUSG00000014771.14	ENSMUST00000054450.7	1120	6	1991	18	1963	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAACTAAAAACTTATG	NA	NA	NA	NA	NA	NA	NA	NA	15745572	15741854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530
ENSMUSG00000014771.14_15742027_15746678_1	chr17	-	423	5	ISM	ENSMUSG00000014771.14	ENSMUST00000054450.7	1120	6	885	190	857	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGACAGACTCGGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	15746678	15742026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634
ENSMUSG00000014771.14_15745522_15747543_1	chr17	-	662	3	NNC	ENSMUSG00000014771.14	novel	651	3	NA	NA	0	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	1229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCATCAATTTTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	15747543	15745521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_15745654_15746634_15746875_15747253
ENSMUSG00000014771.14_15745522_15747543_2	chr17	-	663	3	FSM	ENSMUSG00000014771.14	ENST00000547904.1	651	3	-8	-4	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCATCAATTTTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	15747543	15745521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_15745654_15746634_15746875_15747252
ENSMUSG00000014771.14_15745581_15747543_1	chr17	-	513	4	NNC	ENSMUSG00000014771.14	novel	567	4	NA	NA	0	-55	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGGTTGTGGAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	15747543	15745580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_15745663_15746634_15746875_15747252_15747347_15747446
ENSMUSG00000014771.14_15745581_15747543_2	chr17	-	514	4	FSM	ENSMUSG00000014771.14	ENST00000443345.2	567	4	-6	59	0	-55	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGGTTGTGGAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	15747543	15745580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_15745663_15746634_15746875_15747252_15747347_15747445
ENSMUSG00000014771.14_15745581_15747543_3	chr17	-	509	4	NNC	ENSMUSG00000014771.14	novel	567	4	NA	NA	0	-55	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGGTTGTGGAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	15747543	15745580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_15745663_15746639_15746875_15747252_15747347_15747445
ENSMUSG00000014776.8_106002913_106007453_1	chr8	+	1917	4	FSM	ENSMUSG00000014776.8	ENSMUST00000014920.8	3176	4	141	1118	141	-1118	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTGCTGGACTCACAAG	NA	NA	NA	NA	NA	NA	NA	NA	106002912	106007453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_106003246_106005605_106005903_106006047_106006408_106006526
ENSMUSG00000014776.8_106002990_106007510_1	chr8	+	1897	4	FSM	ENSMUSG00000014776.8	ENSMUST00000014920.8	3176	4	218	1061	218	-1061	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTCTAGGGGGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	106002989	106007510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_106003246_106005605_106005903_106006047_106006408_106006526
ENSMUSG00000014776.8_106003044_106007580_1	chr8	+	1913	4	FSM	ENSMUSG00000014776.8	ENSMUST00000014920.8	3176	4	272	991	272	-991	multi-exon	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACTCCCAGCAACCACAT	NA	NA	NA	NA	NA	NA	NA	NA	106003043	106007580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_106003246_106005605_106005903_106006047_106006408_106006526
ENSMUSG00000014776.8_106005767_106007960_1	chr8	+	1930	3	ISM	ENSMUSG00000014776.8	ENSMUST00000014920.8	3176	4	2995	611	2995	-611	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAAAGGATCCTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	106005766	106007960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106005903_106006047_106006408_106006526
ENSMUSG00000014776.8_106005841_106008002_1	chr8	+	1898	3	ISM	ENSMUSG00000014776.8	ENSMUST00000014920.8	3176	4	3069	569	3069	-569	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTACTACTACTACTACTA	NA	NA	NA	NA	NA	NA	NA	NA	106005840	106008002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106005903_106006047_106006408_106006526
ENSMUSG00000014776.8_106006117_106008139_1	chr8	+	1904	2	ISM	ENSMUSG00000014776.8	ENSMUST00000014920.8	3176	4	3345	432	3345	-432	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTCTCTGAGCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	106006116	106008139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106006408_106006526
ENSMUSG00000014776.8_106006325_106008355_1	chr8	+	1912	2	ISM	ENSMUSG00000014776.8	ENSMUST00000014920.8	3176	4	3553	216	3553	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACACTCAGCTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	106006324	106008355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106006408_106006526
ENSMUSG00000014837.16_106007041_106016140_1	chr8	-	2881	8	NNC	ENSMUSG00000014837.16	novel	2884	8	NA	NA	15	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCTTCTGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	106016140	106007040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_106007088_106008080_106008777_106009621_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015294
ENSMUSG00000014837.16_106007041_106016140_2	chr8	-	2884	8	FSM	ENSMUSG00000014837.16	ENST00000290881.11	2884	8	15	-15	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCTTCTGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	106016140	106007040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_106007088_106008080_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015294
ENSMUSG00000014837.16_106007041_106016140_3	chr8	-	2882	8	NNC	ENSMUSG00000014837.16	novel	2884	8	NA	NA	15	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCTTCTGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	106016140	106007040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_106007088_106008080_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011663_106011806_106011887_106012502_106015294
ENSMUSG00000014846.13_106194125_106195145_1	chr8	-	760	3	FSM	ENSMUSG00000014846.13	ENSMUST00000176419.2	719	3	149	-190	149	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGACTGACTCAGTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	106195145	106194124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_106194657_106194787_106194942_106195071
ENSMUSG00000014846.13_106194301_106197990_1	chr8	-	783	4	FSM	ENSMUSG00000014846.13	ENSMUST00000014990.13	1127	4	168	176	34	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTCTTCCTGTCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	106197990	106194300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_106194657_106194787_106194942_106195071_106195266_106197911
ENSMUSG00000014846.13_106194427_106198001_1	chr8	-	658	4	FSM	ENSMUSG00000014846.13	ENST00000393957.7	981	4	23	300	23	-112	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCCTGGGGTCCAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	106198001	106194426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_106194657_106194787_106194942_106195071_106195266_106197921
ENSMUSG00000014867.10_26812102_26816870_1	chr2	-	480	5	ISM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	7070	2050	7070	-2050	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTCTGGCTGTTTGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	26816870	26812101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780
ENSMUSG00000014867.10_26812164_26816914_1	chr2	-	462	5	ISM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	7026	2112	7026	-2112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTCTGATGATCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	26816914	26812163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780
ENSMUSG00000014867.10_26814474_26823395_1	chr2	-	487	5	ISM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	545	4422	545	-4422	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTCCCAACCATGCG	NA	NA	NA	NA	NA	NA	NA	NA	26823395	26814473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
ENSMUSG00000014867.10_26814524_26823403_1	chr2	-	445	5	ISM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	537	4472	537	-4472	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGCTGCTCTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	26823403	26814523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
ENSMUSG00000014867.10_26816821_26823596_1	chr2	-	457	2	ISM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	344	6769	344	-6769	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCATCCTTCGTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	26823596	26816820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26816968_26823286
ENSMUSG00000014867.10_26816882_26823645_1	chr2	-	445	2	ISM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	295	6830	295	-6830	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCAGTGGAGTGAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	26823645	26816881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26816968_26823286
ENSMUSG00000014873.16_26806393_26809279_1	chr2	+	641	5	ISM	ENSMUSG00000014873.16	ENSMUST00000015017.8	1203	6	14	916	14	-916	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGAGAAGCCGGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	26806392	26809279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203
ENSMUSG00000014873.16_26806503_26809326_1	chr2	+	578	5	ISM	ENSMUSG00000014873.16	ENSMUST00000015017.8	1203	6	124	869	124	-869	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGCCAGAGTGGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	26806502	26809326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203
ENSMUSG00000014873.16_26806825_26809833_1	chr2	+	596	5	ISM	ENSMUSG00000014873.16	ENSMUST00000015017.8	1203	6	446	362	446	-362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCCTTTGGATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	26806824	26809833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809738
ENSMUSG00000014873.16_26809200_26810195_2	chr2	+	628	2	ISM	ENSMUSG00000014873.16	ENSMUST00000015017.8	1203	6	2821	0	2821	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATATGTGTATCATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	26809199	26810195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26809371_26809738
ENSMUSG00000014905.5_44252775_44254980_1	chr12	-	1525	2	ISM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	2129	433	2129	-433	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACGAGTATTAATCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	44254980	44252774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_44254189_44254869
ENSMUSG00000014905.5_44253094_44256942_1	chr12	-	1542	3	FSM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	167	752	167	-752	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGAAATTGTGTTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	44256942	44253093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_44254189_44254869_44255097_44256722
ENSMUSG00000014905.5_44253222_44257109_1	chr12	-	1581	3	FSM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	0	880	0	-880	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAGCTTTAGAAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	44257109	44253221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_44254189_44254869_44255097_44256722
ENSMUSG00000014956.16_32616372_32648821_1	chr5	+	1731	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	185	4046	185	438	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATCTACTTTTCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	32616371	32648821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ENSMUSG00000014956.16_32616566_32649011_1	chr5	+	1727	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	379	3856	0	628	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATCTGATCCATTGATT	NA	NA	NA	NA	NA	NA	NA	NA	32616565	32649011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ENSMUSG00000014956.16_32635439_32649167_1	chr5	+	1668	7	ISM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	19252	3700	18873	784	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGATAAGGCTCATATAGT	NA	NA	NA	NA	NA	NA	NA	NA	32635438	32649167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ENSMUSG00000014956.16_32638037_32649337_1	chr5	+	1732	6	ISM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	21850	3530	21471	954	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGATTCACAGAACATGAG	NA	NA	NA	NA	NA	NA	NA	NA	32638036	32649337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ENSMUSG00000014956.16_32640750_32649566_1	chr5	+	1687	5	ISM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	24563	3301	24184	1183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATAGACATGCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	32640749	32649566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ENSMUSG00000014956.16_32643314_32649773_1	chr5	+	1674	3	ISM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	27127	3094	26748	1390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTATTGGATGTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	32643313	32649773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_32643377_32644914_32645050_32648297
ENSMUSG00000014959.13_70491934_70521756_1	chr2	+	1893	10	FSM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	14	331	0	-313	multi-exon	FALSE	canonical	NA	NA	NA	NA	1833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCACTAAACTGTACAAG	NA	NA	NA	NA	NA	NA	NA	NA	70491933	70521756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ENSMUSG00000014959.13_70491934_70521756_2	chr2	+	1886	10	NNC	ENSMUSG00000014959.13	novel	2238	10	NA	NA	0	-313	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCACTAAACTGTACAAG	NA	NA	NA	NA	NA	NA	NA	NA	70491933	70521756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_70492105_70506808_70506890_70508249_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ENSMUSG00000014959.13_70508243_70521961_1	chr2	+	1840	8	NNC	ENSMUSG00000014959.13	novel	2238	10	NA	NA	16309	-108	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTAGATGCCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	70508242	70521961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514329_70514448_70518729_70518817_70519526_70519647_70521001
ENSMUSG00000014959.13_70508243_70521961_2	chr2	+	1846	8	ISM	ENSMUSG00000014959.13	ENSMUST00000112201.8	2417	11	16323	108	16309	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTAGATGCCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	70508242	70521961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ENSMUSG00000014959.13_70508373_70522065_1	chr2	+	1820	8	ISM	ENSMUSG00000014959.13	ENSMUST00000112201.8	2417	11	16453	4	16439	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCCTTGTGTTCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	70508372	70522065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ENSMUSG00000014959.13_70508871_70522087_1	chr2	+	1769	7	ISM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	16951	0	16937	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCGTGTACTTCATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	70508870	70522087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ENSMUSG00000014980.15_152246486_152262389_2	chr1	-	1086	5	NNC	ENSMUSG00000014980.15	novel	1133	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCGTAATCATCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	152262389	152246485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_152247035_152247504_152247647_152259012_152259142_152259445_152259532_152262209
ENSMUSG00000014980.15_152246956_152262389_1	chr1	-	515	5	FSM	ENSMUSG00000014980.15	ENST00000533373.6	540	5	0	25	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCTGCTCGTCTTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	152262389	152246955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_152247035_152247608_152247647_152259012_152259149_152259449_152259532_152262209
ENSMUSG00000014980.15_152246956_152262389_2	chr1	-	512	5	NNC	ENSMUSG00000014980.15	novel	540	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCTGCTCGTCTTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	152262389	152246955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_152247035_152247608_152247647_152259012_152259142_152259445_152259532_152262209
ENSMUSG00000015002.19_65659036_65701704_1	chr15	+	667	6	ISM	ENSMUSG00000015002.19	ENSMUST00000173858.8	2848	23	146	39396	141	4388	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGATAGAAGAAGTTGACA	NA	NA	NA	NA	NA	NA	NA	NA	65659035	65701704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575
ENSMUSG00000015002.19_65691652_65717893_1	chr15	+	693	6	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	9569	25214	9569	20577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAGTGACAATAAAACACA	NA	NA	NA	NA	NA	NA	NA	NA	65691651	65717893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757
ENSMUSG00000015002.19_65696463_65720016_1	chr15	+	645	6	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	14380	23091	14380	-21084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAACACCCTGTTGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	65696462	65720016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996
ENSMUSG00000015002.19_65696507_65720088_1	chr15	+	673	6	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	14424	23019	14424	-21012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCGTCACCGTAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	65696506	65720088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996
ENSMUSG00000015002.19_65696553_65720150_1	chr15	+	689	6	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	14470	22957	14470	-20950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAATAGGTTTGTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	65696552	65720150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996
ENSMUSG00000015002.19_65701651_65721688_1	chr15	+	667	6	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	19568	21419	19568	-19412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACATCCACTCATACTTT	NA	NA	NA	NA	NA	NA	NA	NA	65701650	65721688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611
ENSMUSG00000015002.19_65709358_65724875_1	chr15	+	674	7	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	27275	18232	27275	-16225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCGCCATCCCTCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	65709357	65724875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809
ENSMUSG00000015002.19_65714491_65724982_1	chr15	+	717	6	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	32408	18125	32408	-16118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTCACCAGACTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	65714490	65724982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809
ENSMUSG00000015002.19_65717834_65726522_1	chr15	+	683	7	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	35751	16585	35751	-14578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGACAATGTTCAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	65717833	65726522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477
ENSMUSG00000015002.19_65719995_65726639_1	chr15	+	742	6	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	37912	16468	37912	-14461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGCTTTCATAACATTCC	NA	NA	NA	NA	NA	NA	NA	NA	65719994	65726639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477
ENSMUSG00000015002.19_65724906_65733549_1	chr15	+	692	7	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	42823	9558	42823	-7551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTGGATATTTTATCCA	NA	NA	NA	NA	NA	NA	NA	NA	65724905	65733549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500
ENSMUSG00000015002.19_65725397_65737775_1	chr15	+	690	7	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	43314	5332	43314	-3325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGGGGAGCACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	65725396	65737775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726
ENSMUSG00000015002.19_65726476_65738676_1	chr15	+	737	7	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	44393	4431	44393	-2424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGAATCTGTGCGCAA	NA	NA	NA	NA	NA	NA	NA	NA	65726475	65738676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572
ENSMUSG00000015002.19_65726605_65739168_1	chr15	+	658	8	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	44522	3939	44522	-1932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGGGTTAGCAAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	65726604	65739168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118
ENSMUSG00000015002.19_65727351_65743107_1	chr15	+	643	8	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	45268	0	45268	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCTCATGAAGACTACAG	NA	NA	NA	NA	NA	NA	NA	NA	65727350	65743107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ENSMUSG00000015002.19_65729357_65743315_1	chr15	+	693	6	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	47274	-208	47274	208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGGTTCCTGTTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	65729356	65743315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ENSMUSG00000015002.19_65729357_65743337_1	chr15	+	715	6	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	47274	-230	47274	230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGAACAGGTATTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	65729356	65743337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ENSMUSG00000015002.19_65733576_65743467_1	chr15	+	686	5	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	51493	-360	51493	360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATTTTCTTTTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	65733575	65743467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ENSMUSG00000015013.10_123338380_123341153_1	chr8	+	330	3	NNC	ENSMUSG00000015013.10	novel	322	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAGGAAAGCAAGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	123338379	123341153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_123338433_123339804_123339976_123341047
ENSMUSG00000015013.10_123338380_123341153_2	chr8	+	331	3	FSM	ENSMUSG00000015013.10	ENST00000567312.5	322	3	-9	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAGGAAAGCAAGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	123338379	123341153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123338433_123339804_123339976_123341046
ENSMUSG00000015013.10_123338380_123341153_3	chr8	+	398	4	FSM	ENSMUSG00000015013.10	ENST00000567895.5	397	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAGGAAAGCAAGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	123338379	123341153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123338433_123339827_123339978_123340659_123340748_123341046
ENSMUSG00000015013.10_123338380_123342358_1	chr8	+	623	5	FSM	ENSMUSG00000015013.10	ENSMUST00000015157.10	1659	5	-5	1041	-1	-1041	multi-exon	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGCTGAGGACCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	123338379	123342358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123338433_123339804_123339978_123340659_123340748_123341046_123341127_123342129
ENSMUSG00000015013.10_123339859_123342449_1	chr8	+	607	4	ISM	ENSMUSG00000015013.10	ENSMUST00000015157.10	1659	5	1474	950	1470	-950	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGAGACTGTGGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	123339858	123342449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123339978_123340659_123340748_123341046_123341127_123342129
ENSMUSG00000015013.10_123339901_123342512_1	chr8	+	628	4	ISM	ENSMUSG00000015013.10	ENSMUST00000015157.10	1659	5	1516	887	1512	-887	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGCCGAGAGCCAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	123339900	123342512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123339978_123340659_123340748_123341046_123341127_123342129
ENSMUSG00000015053.15_88175695_88177368_1	chr6	+	610	3	ISM	ENSMUSG00000015053.15	ENST00000430265.6	2503	6	34	5963	34	-5963	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCGGAGGGCCTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	88175694	88177368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_88175864_88176498_88176772_88177200
ENSMUSG00000015053.15_88175739_88177425_1	chr6	+	623	3	ISM	ENSMUSG00000015053.15	ENST00000430265.6	2503	6	78	5906	78	-5906	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGAGCTCCGTGGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	88175738	88177425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_88175864_88176498_88176772_88177200
ENSMUSG00000015053.15_88175802_88177474_1	chr6	+	609	3	ISM	ENSMUSG00000015053.15	ENST00000430265.6	2503	6	141	5857	141	-5857	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTCTTCGGCTTCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	88175801	88177474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_88175864_88176498_88176772_88177200
ENSMUSG00000015053.15_88176545_88177573_1	chr6	+	599	2	NNC	ENSMUSG00000015053.15	novel	3135	6	NA	NA	884	-5758	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	105	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCCCGGGGTGAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	88176544	88177573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_88176772_88177201
ENSMUSG00000015053.15_88176568_88177625_1	chr6	+	629	2	ISM	ENSMUSG00000015053.15	ENST00000430265.6	2503	6	907	5706	907	-5706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGCATGAAGATGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	88176567	88177625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_88176772_88177200
ENSMUSG00000015053.15_88176642_88177675_1	chr6	+	605	2	ISM	ENSMUSG00000015053.15	ENST00000430265.6	2503	6	981	5656	981	-5656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGGCACCCAGCCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	88176641	88177675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_88176772_88177200
ENSMUSG00000015053.15_88177361_88181625_1	chr6	+	647	3	ISM	ENSMUSG00000015053.15	ENST00000430265.6	2503	6	1700	1706	1700	-1706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGCCGGAACGCCAACGGG	NA	NA	NA	NA	NA	NA	NA	NA	88177360	88181625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_88177843_88179400_88179547_88181606
ENSMUSG00000015053.15_88177442_88181657_1	chr6	+	598	3	ISM	ENSMUSG00000015053.15	ENST00000430265.6	2503	6	1781	1674	1781	-1674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCCTGTGGCCTCTACTA	NA	NA	NA	NA	NA	NA	NA	NA	88177441	88181657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_88177843_88179400_88179547_88181606
ENSMUSG00000015053.15_88177511_88181692_1	chr6	+	564	3	ISM	ENSMUSG00000015053.15	ENST00000430265.6	2503	6	1850	1639	1850	-1639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCACCCCACCCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	88177510	88181692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_88177843_88179400_88179547_88181606
ENSMUSG00000015053.15_88177712_88182436_1	chr6	+	621	4	ISM	ENSMUSG00000015053.15	ENST00000430265.6	2503	6	2051	895	2051	-895	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCCCACCCGTCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	88177711	88182436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_88177843_88179400_88179547_88181606_88181691_88182176
ENSMUSG00000015053.15_88179437_88182582_1	chr6	+	600	3	ISM	ENSMUSG00000015053.15	ENST00000430265.6	2503	6	3776	749	3776	-749	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAGAGACCCACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	88179436	88182582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_88179547_88181606_88181691_88182176
ENSMUSG00000015053.15_88179476_88182645_1	chr6	+	624	3	ISM	ENSMUSG00000015053.15	ENST00000430265.6	2503	6	3815	686	3815	-686	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCCTTGTGCCGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	88179475	88182645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_88179547_88181606_88181691_88182176
ENSMUSG00000015053.15_88181606_88182753_1	chr6	+	662	2	ISM	ENSMUSG00000015053.15	ENST00000430265.6	2503	6	5945	578	5945	-578	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAAAATGGACAGGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	88181605	88182753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_88181691_88182176
ENSMUSG00000015087.15_25473356_25474852_1	chr2	-	769	3	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	23681	326	23681	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTCTCCCAGAGCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	25474852	25473355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25474001_25474114_25474174_25474787
ENSMUSG00000015087.15_25473412_25474915_1	chr2	-	776	3	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	23618	382	23618	-382	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGCTTGGCTTCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	25474915	25473411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25474001_25474114_25474174_25474787
ENSMUSG00000015087.15_25473565_25475469_1	chr2	-	814	4	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	23064	535	23064	-535	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGGAGGGAGGGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	25475469	25473564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319
ENSMUSG00000015087.15_25473770_25475725_1	chr2	-	778	5	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	22808	740	22808	-740	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTGCCAGTGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	25475725	25473769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635
ENSMUSG00000015087.15_25473816_25475835_1	chr2	-	842	5	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	22698	786	22698	-786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGAGCTCTAAACATGCC	NA	NA	NA	NA	NA	NA	NA	NA	25475835	25473815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635
ENSMUSG00000015087.15_25473948_25476928_1	chr2	-	769	6	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	21605	918	21605	-918	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGGCAAGGAGGATC	NA	NA	NA	NA	NA	NA	NA	NA	25476928	25473947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635_25475846_25476879
ENSMUSG00000015087.15_25474821_25477351_1	chr2	-	791	5	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	21182	1791	21182	-1791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGATGGGACCTAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	25477351	25474820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286
ENSMUSG00000015087.15_25474896_25477379_1	chr2	-	744	5	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	21154	1866	21154	-1866	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACCTCCACCTTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	25477379	25474895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286
ENSMUSG00000015087.15_25474928_25477450_1	chr2	-	783	5	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	21083	1898	21083	-1898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGTAACTGATGAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	25477450	25474927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286
ENSMUSG00000015087.15_25475422_25477577_1	chr2	-	779	4	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	20956	2392	20956	-2392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGAGTGATCCTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	25477577	25475421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25475549_25475635_25475846_25476879_25477031_25477286
ENSMUSG00000015087.15_25475527_25478675_1	chr2	-	791	5	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	19858	2497	19858	-2497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAAAAGAAGAGAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	25478675	25475526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25475549_25475635_25475846_25476879_25477031_25477286_25477640_25478620
ENSMUSG00000015087.15_25475686_25482372_1	chr2	-	831	5	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	16161	2656	16161	-2656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACCCTAGAGTGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	25482372	25475685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25475846_25476879_25477031_25477286_25477640_25478620_25478725_25482309
ENSMUSG00000015087.15_25475829_25482842_1	chr2	-	795	6	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	15691	2799	15691	-2799	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAGGGAACCCAATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	25482842	25475828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25475846_25476879_25477031_25477286_25477640_25478620_25478725_25482309_25482416_25482778
ENSMUSG00000015087.15_25477287_25486523_1	chr2	-	783	5	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	12010	4257	12010	-4257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCTGGGAGCAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	25486523	25477286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25477640_25478620_25478725_25482309_25482416_25482778_25482920_25486444
ENSMUSG00000015087.15_25477539_25498177_1	chr2	-	833	9	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	356	4509	356	-4509	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGCTGTATCCACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	25498177	25477538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25477640_25478620_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
ENSMUSG00000015087.15_25478699_25498313_1	chr2	-	790	8	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	220	5669	220	-5669	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAACCAACTAGACATCG	NA	NA	NA	NA	NA	NA	NA	NA	25498313	25478698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
ENSMUSG00000015087.15_25482791_25498468_1	chr2	-	801	6	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	65	9761	65	-9761	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGGACAGGTGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	25498468	25482790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
ENSMUSG00000015087.15_25482847_25498486_1	chr2	-	763	6	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	47	9817	47	-9817	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGACATGGGCGAGCATCG	NA	NA	NA	NA	NA	NA	NA	NA	25498486	25482846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
ENSMUSG00000015092.10_25447909_25451036_1	chr2	+	402	4	ISM	ENSMUSG00000015092.10	ENST00000371649.5	780	5	-27	1055	-27	-1055	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAACCAGGTTTTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	25447908	25451036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980
ENSMUSG00000015092.10_25447909_25451922_1	chr2	+	638	5	FSM	ENSMUSG00000015092.10	ENST00000371649.5	780	5	-27	169	-27	-169	multi-exon	FALSE	canonical	NA	NA	NA	NA	1820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACAAAGCCTCGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	25447908	25451922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980_25451075_25451724
ENSMUSG00000015092.10_25448010_25451883_1	chr2	+	360	5	FSM	ENSMUSG00000015092.10	ENSMUST00000015236.4	722	5	151	211	74	-208	multi-exon	FALSE	canonical	NA	NA	NA	NA	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCGGGAAGCCTATCGAG	NA	NA	NA	NA	NA	NA	NA	NA	25448009	25451883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980_25451075_25451862
ENSMUSG00000015092.10_25448021_25451972_1	chr2	+	576	5	FSM	ENSMUSG00000015092.10	ENST00000371649.5	780	5	85	119	85	-119	multi-exon	FALSE	canonical	NA	NA	NA	NA	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAGGACCACCAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	25448020	25451972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980_25451075_25451724
ENSMUSG00000015092.10_25450597_25452094_1	chr2	+	580	3	ISM	ENSMUSG00000015092.10	ENST00000371649.5	780	5	2661	-3	2661	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCCTGGATTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	25450596	25452094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25450713_25450980_25451075_25451724
ENSMUSG00000015092.10_25450597_25452094_2	chr2	+	442	3	ISM	ENSMUSG00000015092.10	ENSMUST00000015236.4	722	5	2738	0	2661	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCCTGGATTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	25450596	25452094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25450713_25450980_25451075_25451862
ENSMUSG00000015094.17_25293181_25299503_1	chr2	+	1376	9	NNC	ENSMUSG00000015094.17	novel	1407	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCTTCTGGGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	25293180	25299503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_25293378_25296226_25296374_25297612_25297749_25297855_25298027_25298125_25298193_25298271_25298360_25298618_25298699_25298916_25299014_25299110
ENSMUSG00000015094.17_25293181_25299503_2	chr2	+	1377	9	NNC	ENSMUSG00000015094.17	novel	1485	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCTTCTGGGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	25293180	25299503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_25293378_25296226_25296374_25297607_25297749_25297852_25298027_25298125_25298193_25298271_25298360_25298618_25298699_25298923_25299014_25299110
ENSMUSG00000015094.17_25293181_25299503_3	chr2	+	1374	9	NNC	ENSMUSG00000015094.17	novel	1407	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCTTCTGGGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	25293180	25299503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_25293378_25296226_25296374_25297607_25297749_25297855_25298027_25298125_25298193_25298278_25298360_25298618_25298699_25298916_25299014_25299110
ENSMUSG00000015095.13_25390762_25393285_1	chr2	+	835	5	ISM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	0	2198	0	-2198	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGACCGGGACAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	25390761	25393285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25390899_25391947_25392164_25392412_25392571_25392882_25393058_25393136
ENSMUSG00000015095.13_25390871_25393562_1	chr2	+	840	6	ISM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	109	1921	109	-1921	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCCTGCTGGATGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	25390870	25393562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25390899_25391947_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448
ENSMUSG00000015095.13_25392410_25393878_1	chr2	+	915	4	ISM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	1648	1605	1648	-1605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGGTGGGCAGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	25392409	25393878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25392571_25392882_25393058_25393136_25393286_25393448
ENSMUSG00000015095.13_25392881_25394339_1	chr2	+	904	4	ISM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	2119	1144	2119	-1144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCCTGGTGAGCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	25392880	25394339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25393058_25393136_25393286_25393448_25393879_25394191
ENSMUSG00000015095.13_25393050_25394473_1	chr2	+	780	5	ISM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	2288	1010	2288	-1010	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGACCCCATGCAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	25393049	25394473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428
ENSMUSG00000015095.13_25393238_25394641_1	chr2	+	839	4	ISM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	2476	842	2476	-842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCTCAGGTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	25393237	25394641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25393286_25393448_25393879_25394191_25394340_25394428
ENSMUSG00000015095.13_25393705_25395018_1	chr2	+	832	4	ISM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	2943	465	2943	-465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACCCCGTGGTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	25393704	25395018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25393879_25394191_25394340_25394428_25394642_25394721
ENSMUSG00000015095.13_25394230_25395217_1	chr2	+	819	3	ISM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	3468	266	3468	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTCATTGGGAACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	25394229	25395217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25394340_25394428_25394642_25394721
ENSMUSG00000015095.13_25394450_25395379_1	chr2	+	850	2	ISM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	3688	104	3688	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATAATTCAGTTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	25394449	25395379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25394642_25394721
ENSMUSG00000015095.13_25394556_25395483_1	chr2	+	848	2	ISM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	3794	0	3794	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	25394555	25395483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25394642_25394721
ENSMUSG00000015112.16_6041517_6042571_1	chr6	-	829	2	ISM	ENSMUSG00000015112.16	ENST00000265631.10	2940	17	148748	296	138544	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAGACAGAAGAAACACAA	NA	NA	NA	NA	NA	NA	NA	NA	6042571	6041516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_6042333_6042558
ENSMUSG00000015112.16_6041666_6042810_1	chr6	-	828	3	ISM	ENSMUSG00000015112.16	ENST00000265631.10	2940	17	148509	445	138305	-445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTATATTATGAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	6042810	6041665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_6042333_6042558_6042650_6042740
ENSMUSG00000015112.16_6041834_6052846_1	chr6	-	831	4	ISM	ENSMUSG00000015112.16	ENST00000265631.10	2940	17	138473	613	128269	-613	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTAATGCTACTGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	6052846	6041833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764
ENSMUSG00000015112.16_6041982_6073471_1	chr6	-	810	5	ISM	ENSMUSG00000015112.16	ENST00000265631.10	2940	17	117848	761	107644	-761	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGGGGAATTATTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	6073471	6041981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401
ENSMUSG00000015112.16_6042084_6095203_1	chr6	-	836	6	ISM	ENSMUSG00000015112.16	ENST00000265631.10	2940	17	96116	863	85912	-863	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGGCTCCGTCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	6095203	6042083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146
ENSMUSG00000015112.16_6042227_6109212_1	chr6	-	802	8	ISM	ENSMUSG00000015112.16	ENST00000265631.10	2940	17	82107	1006	71903	-1006	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAGAACAAATTTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	6109212	6042226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180
ENSMUSG00000015112.16_6042262_6109279_1	chr6	-	834	8	ISM	ENSMUSG00000015112.16	ENST00000265631.10	2940	17	82040	1041	71836	-1041	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCTACAAACTGGCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	6109279	6042261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180
ENSMUSG00000015112.16_6042828_6114000_1	chr6	-	796	8	ISM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	103118	1610	67115	-1607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAACCACTTACAACGGT	NA	NA	NA	NA	NA	NA	NA	NA	6114000	6042827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937
ENSMUSG00000015112.16_6052776_6114292_1	chr6	-	803	8	ISM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	102826	11558	66823	-11555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATTGCTGGTAAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	6114292	6052775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224
ENSMUSG00000015112.16_6073438_6115082_1	chr6	-	778	8	ISM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	102036	32220	66033	-32217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTACGAGACCTGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	6115082	6073437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969
ENSMUSG00000015112.16_6095177_6117245_1	chr6	-	816	8	ISM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	99873	53959	63870	-53956	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGGCAGAGATTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	6117245	6095176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098
ENSMUSG00000015112.16_6109202_6131735_1	chr6	-	798	7	ISM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	85383	67984	49380	43207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTTTGGACTGTACCGA	NA	NA	NA	NA	NA	NA	NA	NA	6131735	6109201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628
ENSMUSG00000015112.16_6109303_6152468_1	chr6	-	791	8	ISM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	64650	68085	28647	43106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTCGAATGCAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	6152468	6109302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407
ENSMUSG00000015112.16_6113976_6181066_1	chr6	-	779	7	ISM	ENSMUSG00000015112.16	ENST00000265631.10	2940	17	10253	72755	49	38433	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTACCCTTCAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	6181066	6113975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970
ENSMUSG00000015112.16_6152409_6181115_1	chr6	-	240	2	NNC	ENSMUSG00000015112.16	novel	245	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGGAAGGTGGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	6181115	6152408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_6152498_6180964
ENSMUSG00000015112.16_6152409_6181115_2	chr6	-	245	2	FSM	ENSMUSG00000015112.16	ENST00000538551.1	245	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGGAAGGTGGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	6181115	6152408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_6152505_6180966
ENSMUSG00000015120.16_25480895_25488249_1	chr17	-	918	5	ISM	ENSMUSG00000015120.16	ENSMUST00000173084.8	1286	8	4108	0	-3406	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTTTGTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	25488249	25480894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165
ENSMUSG00000015120.16_25480895_25491739_1	chr17	-	1223	7	ISM	ENSMUSG00000015120.16	ENSMUST00000173084.8	1286	8	618	0	618	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTTTGTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	25491739	25480894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511
ENSMUSG00000015120.16_25481039_25492357_1	chr17	-	1142	8	FSM	ENSMUSG00000015120.16	ENSMUST00000173084.8	1286	8	0	144	0	110	multi-exon	FALSE	canonical	NA	NA	NA	NA	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCCTCGTCCTTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	25492357	25481038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511_25491740_25492294
ENSMUSG00000015120.16_25481039_25493276_1	chr17	-	981	7	FSM	ENSMUSG00000015120.16	ENSMUST00000049911.16	1138	7	8	149	0	110	multi-exon	TRUE	canonical	NA	NA	NA	NA	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCCTCGTCCTTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	25493276	25481038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493146
ENSMUSG00000015120.16_25481153_25493276_1	chr17	-	867	7	FSM	ENSMUSG00000015120.16	ENSMUST00000049911.16	1138	7	8	263	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCTAGCAGCTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	25493276	25481152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493146
ENSMUSG00000015126.10_25459144_25461563_1	chr17	+	983	6	FSM	ENSMUSG00000015126.10	ENSMUST00000063574.7	1192	6	0	209	0	-209	multi-exon	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAACAAGAGGCTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	25459143	25461563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25459339_25459417_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
ENSMUSG00000015126.10_25459261_25461772_1	chr17	+	1075	6	FSM	ENSMUSG00000015126.10	ENSMUST00000063574.7	1192	6	117	0	117	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	NA	NA	NA	NA	NA	NA	NA	NA	25459260	25461772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25459339_25459417_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
ENSMUSG00000015127.15_25448256_25450841_1	chr17	+	652	4	FSM	ENSMUSG00000015127.15	ENST00000397464.5	1533	4	46	835	46	-835	multi-exon	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGCCAGACCCATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	25448255	25450841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25448441_25449180_25449384_25449494_25449603_25450685
ENSMUSG00000015127.15_25448339_25450880_1	chr17	+	608	4	FSM	ENSMUSG00000015127.15	ENST00000397464.5	1533	4	129	796	129	-796	multi-exon	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGGGCATGCCACGTG	NA	NA	NA	NA	NA	NA	NA	NA	25448338	25450880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25448441_25449180_25449384_25449494_25449603_25450685
ENSMUSG00000015127.15_25448399_25450921_1	chr17	+	589	4	FSM	ENSMUSG00000015127.15	ENST00000397464.5	1533	4	189	755	189	-755	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGGTACCCCACGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	25448398	25450921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25448441_25449180_25449384_25449494_25449603_25450685
ENSMUSG00000015127.15_25449220_25451022_1	chr17	+	609	3	ISM	ENSMUSG00000015127.15	ENST00000397464.5	1533	4	1010	654	1010	-654	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCGAAGAACCTCTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	25449219	25451022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25449384_25449494_25449603_25450685
ENSMUSG00000015127.15_25449273_25451072_1	chr17	+	606	3	ISM	ENSMUSG00000015127.15	ENST00000397464.5	1533	4	1063	604	1063	-604	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAGCATGCTTTTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	25449272	25451072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25449384_25449494_25449603_25450685
ENSMUSG00000015127.15_25449316_25451132_1	chr17	+	623	3	ISM	ENSMUSG00000015127.15	ENST00000397464.5	1533	4	1106	544	1106	-544	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGCCTCGTCAAAGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	25449315	25451132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25449384_25449494_25449603_25450685
ENSMUSG00000015127.15_25449580_25451269_1	chr17	+	607	2	ISM	ENSMUSG00000015127.15	ENST00000397464.5	1533	4	1370	407	1370	-407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTTGACTCATAGT	NA	NA	NA	NA	NA	NA	NA	NA	25449579	25451269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25449603_25450685
ENSMUSG00000015143.16_80214321_80220988_1	chr12	-	1621	6	ISM	ENSMUSG00000015143.16	ENST00000682331.1	3558	20	86189	-10	85877	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTTTGCTTGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	80220988	80214320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853
ENSMUSG00000015143.16_80214321_80220992_1	chr12	-	1706	7	ISM	ENSMUSG00000015143.16	ENST00000684639.1	3474	21	85957	-10	85873	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTTTGCTTGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	80220992	80214320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80215255_80215631_80215791_80216956_80217023_80217459_80217541_80218502_80218650_80219736_80219917_80220853
ENSMUSG00000015143.16_80214321_80228283_1	chr12	-	2435	12	ISM	ENSMUSG00000015143.16	ENST00000684639.1	3474	21	78666	-10	78582	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1796	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTTTGCTTGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	80228283	80214320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80215255_80215631_80215791_80216956_80217023_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134
ENSMUSG00000015143.16_80214441_80221323_1	chr12	-	1672	8	ISM	ENSMUSG00000015143.16	ENST00000684639.1	3474	21	85626	110	85542	104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATGACTGCAGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	80221323	80214440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80215255_80215631_80215791_80216956_80217023_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233
ENSMUSG00000015143.16_80214449_80222987_1	chr12	-	1551	7	ISM	ENSMUSG00000015143.16	ENST00000682331.1	3558	20	84190	118	83878	96	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCCTGTTTTATGACTG	NA	NA	NA	NA	NA	NA	NA	NA	80222987	80214448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80222929
ENSMUSG00000015143.16_80214479_80221405_1	chr12	-	1716	8	ISM	ENSMUSG00000015143.16	ENST00000684639.1	3474	21	85544	148	85460	66	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCATTTTTCAGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	80221405	80214478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80215255_80215631_80215791_80216956_80217023_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233
ENSMUSG00000015143.16_80214561_80223987_1	chr12	-	1548	8	ISM	ENSMUSG00000015143.16	ENST00000682331.1	3558	20	83190	230	82878	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACTTGTCCATGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	80223987	80214560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80222929_80223071_80223961
ENSMUSG00000015143.16_80214644_80223038_1	chr12	-	1671	9	ISM	ENSMUSG00000015143.16	ENST00000684713.1	3476	21	84100	99	83827	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTCTAATTTCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	80223038	80214643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80215255_80215631_80215791_80216956_80217023_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929
ENSMUSG00000015143.16_80214687_80225131_1	chr12	-	1561	9	ISM	ENSMUSG00000015143.16	ENST00000682331.1	3558	20	82046	356	81734	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGAAGTTTTTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	80225131	80214686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80222929_80223071_80223961_80224071_80225075
ENSMUSG00000015143.16_80214735_80240464_1	chr12	-	2485	16	ISM	ENSMUSG00000015143.16	ENST00000684639.1	3474	21	66485	404	66401	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2069	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGTGACATAGGAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	80240464	80214734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80215255_80215631_80215791_80216956_80217023_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409
ENSMUSG00000015143.16_80214877_80225227_1	chr12	-	1731	11	ISM	ENSMUSG00000015143.16	ENST00000684713.1	3476	21	81911	332	81638	219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTACGTTAAAAAAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	80225227	80214876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80215255_80215631_80215791_80216956_80217023_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075
ENSMUSG00000015143.16_80214877_80228283_1	chr12	-	1615	10	ISM	ENSMUSG00000015143.16	ENST00000682331.1	3558	20	78894	546	78582	219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTACGTTAAAAAAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	80228283	80214876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80222929_80223071_80223961_80224071_80225075_80225227_80228134
ENSMUSG00000015143.16_80214877_80243789_1	chr12	-	2539	18	ISM	ENSMUSG00000015143.16	ENST00000684639.1	3474	21	63160	546	63076	219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTACGTTAAAAAAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	80243789	80214876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80215255_80215631_80215791_80216956_80217023_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699
ENSMUSG00000015143.16_80215096_80230317_1	chr12	-	1546	11	ISM	ENSMUSG00000015143.16	ENST00000682331.1	3558	20	76860	765	76548	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCCCTGCCTCCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	80230317	80215095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166
ENSMUSG00000015143.16_80215139_80230237_1	chr12	-	1687	13	ISM	ENSMUSG00000015143.16	ENST00000684713.1	3476	21	76901	594	76628	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCCTTCTCCACGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	80230237	80215138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80215255_80215631_80215791_80216956_80217023_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166
ENSMUSG00000015143.16_80216956_80240493_1	chr12	-	1572	12	ISM	ENSMUSG00000015143.16	ENST00000682331.1	3558	20	66684	2625	66372	-1860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGTAAACCCCCTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	80240493	80216955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409
ENSMUSG00000015143.16_80218502_80243250_1	chr12	-	1586	12	ISM	ENSMUSG00000015143.16	ENST00000682331.1	3558	20	63927	4171	63615	-3406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCCCCAGTTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	80243250	80218501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80218650_80219736_80219917_80220853_80220989_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168
ENSMUSG00000015143.16_80219839_80245802_1	chr12	-	1652	14	ISM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	61063	4743	61063	-4743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCGTCAATTACAAGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	80245802	80219838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754
ENSMUSG00000015143.16_80219853_80251797_1	chr12	-	1556	14	ISM	ENSMUSG00000015143.16	ENST00000682331.1	3558	20	55380	5522	55068	-4757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGAGAAGAGCATCGTC	NA	NA	NA	NA	NA	NA	NA	NA	80251797	80219852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80219917_80220853_80220989_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735
ENSMUSG00000015143.16_80220853_80251855_1	chr12	-	1734	14	ISM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	55010	5757	55010	-5757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTTACATTGGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	80251855	80220852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735
ENSMUSG00000015143.16_80220928_80256186_1	chr12	-	1530	14	ISM	ENSMUSG00000015143.16	ENST00000682331.1	3558	20	50991	6597	50679	-5832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGAGAGGCTACGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	80256186	80220927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80220989_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132
ENSMUSG00000015143.16_80220954_80256164_1	chr12	-	1665	15	ISM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	50701	5858	50701	-5858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGAGGAACATGCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	80256164	80220953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132
ENSMUSG00000015143.16_80221350_80306865_1	chr12	-	1702	15	ISM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	0	6254	0	-6254	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGGCATCCACAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	80306865	80221349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ENSMUSG00000015143.16_80221401_80306880_1	chr12	-	1666	15	ISM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	-15	6305	-15	-6305	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGCAGTTCAAGGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	80306880	80221400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ENSMUSG00000015143.16_80223962_80307145_1	chr12	-	1774	13	ISM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	-280	8866	0	-8866	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGACCCTCCCCCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	80307145	80223961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ENSMUSG00000015149.15_28466160_28487078_1	chr7	+	1017	13	ISM	ENSMUSG00000015149.15	ENSMUST00000122915.8	1828	15	0	1007	0	-422	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCTGGGCCTGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	28466159	28487078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28466293_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007
ENSMUSG00000015149.15_28466160_28487685_1	chr7	+	1475	16	FSM	ENSMUSG00000015149.15	ENSMUST00000072965.5	1843	16	-32	400	0	185	multi-exon	FALSE	canonical	NA	NA	NA	NA	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCACCATAGCCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	28466159	28487685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_28466293_28467056_28467104_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341
ENSMUSG00000015149.15_28466241_28487215_1	chr7	+	965	14	ISM	ENSMUSG00000015149.15	ENSMUST00000122915.8	1828	15	81	870	0	-285	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGCCTGGCTCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	28466240	28487215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28466293_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186
ENSMUSG00000015149.15_28467057_28487685_1	chr7	+	1339	15	FSM	ENSMUSG00000015149.15	ENSMUST00000155327.8	2117	15	378	400	378	185	multi-exon	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCACCATAGCCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	28467056	28487685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_28467104_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487344
ENSMUSG00000015149.15_28471562_28487421_1	chr7	+	937	13	ISM	ENSMUSG00000015149.15	ENSMUST00000155327.8	2117	15	4883	664	4883	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATCTCCCCTGGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	28471561	28487421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487344
ENSMUSG00000015149.15_28476433_28488085_1	chr7	+	1475	11	ISM	ENSMUSG00000015149.15	ENSMUST00000155327.8	2117	15	9754	0	9754	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGACTTGTGTGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	28476432	28488085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487344
ENSMUSG00000015149.15_28476614_28487685_1	chr7	+	982	10	ISM	ENSMUSG00000015149.15	ENSMUST00000155327.8	2117	15	9935	400	9935	185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCACCATAGCCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	28476613	28487685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487344
ENSMUSG00000015149.15_28478345_28487500_1	chr7	+	591	7	ISM	ENSMUSG00000015149.15	ENST00000358931.9	1113	13	12207	0	11666	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATGACCTCCCGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	28478344	28487500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485279_28487186_28487254_28487341
ENSMUSG00000015149.15_28484808_28487916_1	chr7	+	952	7	ISM	ENSMUSG00000015149.15	ENSMUST00000155327.8	2117	15	18129	169	18129	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGGGGCCTTGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	28484807	28487916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487344
ENSMUSG00000015149.15_28485094_28488085_1	chr7	+	1059	6	ISM	ENSMUSG00000015149.15	ENSMUST00000155327.8	2117	15	18415	0	18415	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGACTTGTGTGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	28485093	28488085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487344
ENSMUSG00000015176.12_46064471_46072535_1	chr19	+	2020	13	NNC	ENSMUSG00000015176.12	novel	2461	13	NA	NA	7	-355	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAAGCGAGGCAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	46064470	46072535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069751_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071807_46071964_46072070_46072189_46072283_46072450
ENSMUSG00000015176.12_46064493_46072582_1	chr19	+	2045	13	NNC	ENSMUSG00000015176.12	novel	2461	13	NA	NA	29	-308	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCCGTCAAATTCGACAG	NA	NA	NA	NA	NA	NA	NA	NA	46064492	46072582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069751_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071807_46071964_46072070_46072189_46072283_46072450
ENSMUSG00000015176.12_46064493_46072589_1	chr19	+	2048	13	NNC	ENSMUSG00000015176.12	novel	2461	13	NA	NA	29	-301	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATTCGACAGCGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	46064492	46072589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069751_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071807_46071964_46072070_46072193_46072283_46072450
ENSMUSG00000015176.12_46064493_46072654_1	chr19	+	2117	13	NNC	ENSMUSG00000015176.12	novel	2461	13	NA	NA	29	-236	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTCAACTCCAGTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	46064492	46072654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069751_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071807_46071964_46072070_46072189_46072283_46072450
ENSMUSG00000015176.12_46067142_46073054_1	chr19	+	2428	12	ISM	ENSMUSG00000015176.12	ENSMUST00000223728.2	3523	13	2733	915	2678	98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGCTAAGCATACTCT	NA	NA	NA	NA	NA	NA	NA	NA	46067141	46073054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ENSMUSG00000015176.12_46067332_46072767_1	chr19	+	2057	11	NNC	ENSMUSG00000015176.12	novel	2461	13	NA	NA	2868	-123	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAGCTGAATATCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	46067331	46072767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_46067461_46067569_46067698_46068349_46068525_46069751_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071807_46071964_46072070_46072193_46072283_46072450
ENSMUSG00000015176.12_46067333_46073171_1	chr19	+	2471	11	ISM	ENSMUSG00000015176.12	ENSMUST00000225780.2	2978	13	2953	221	2869	215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTACTAATTGGCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	46067332	46073171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ENSMUSG00000015176.12_46067370_46073240_1	chr19	+	2503	11	ISM	ENSMUSG00000015176.12	ENSMUST00000225780.2	2978	13	2990	152	2906	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTGTTACTGCTACATG	NA	NA	NA	NA	NA	NA	NA	NA	46067369	46073240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ENSMUSG00000015176.12_46067412_46072900_1	chr19	+	2110	11	NNC	ENSMUSG00000015176.12	novel	2461	13	NA	NA	2948	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTGTGATTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	46067411	46072900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_46067461_46067569_46067698_46068349_46068525_46069751_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071807_46071964_46072070_46072193_46072283_46072450
ENSMUSG00000015176.12_46067569_46072900_1	chr19	+	2066	10	NNC	ENSMUSG00000015176.12	novel	2461	13	NA	NA	3105	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTGTGATTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	46067568	46072900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_46067698_46068349_46068525_46069751_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071807_46071964_46072070_46072189_46072283_46072450
ENSMUSG00000015176.12_46067609_46073392_1	chr19	+	2525	10	ISM	ENSMUSG00000015176.12	ENSMUST00000225780.2	2978	13	3229	0	3145	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCATGGTTGAGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	46067608	46073392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ENSMUSG00000015176.12_46067664_46073392_1	chr19	+	2470	10	ISM	ENSMUSG00000015176.12	ENSMUST00000225780.2	2978	13	3284	0	3200	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCATGGTTGAGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	46067663	46073392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ENSMUSG00000015176.12_46068347_46072570_1	chr19	+	1602	9	NNC	ENSMUSG00000015176.12	novel	2461	13	NA	NA	3883	-320	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCCAGGTCAATTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	46068346	46072570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_46068525_46069751_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071807_46071964_46072070_46072197_46072283_46072450
ENSMUSG00000015176.12_46070015_46072900_1	chr19	+	1613	7	NNC	ENSMUSG00000015176.12	novel	2441	13	NA	NA	5551	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTGTGATTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	46070014	46072900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071964_46072070_46072189_46072283_46072450
ENSMUSG00000015202.14_7069063_7076826_1	chr10	-	1806	3	ISM	ENSMUSG00000015202.14	ENSMUST00000150282.2	2554	6	8680	0	8680	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGGGATTTTATGAATT	NA	NA	NA	NA	NA	NA	NA	NA	7076826	7069062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7070587_7076094_7076185_7076634
ENSMUSG00000015202.14_7069595_7085309_1	chr10	-	1825	6	FSM	ENSMUSG00000015202.14	ENSMUST00000150282.2	2554	6	197	532	197	-532	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTGCAGTTGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	7085309	7069594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_7070587_7076094_7076185_7076634_7076844_7079022_7079148_7084521_7084669_7085047
ENSMUSG00000015202.14_7069664_7085346_1	chr10	-	1793	6	FSM	ENSMUSG00000015202.14	ENSMUST00000150282.2	2554	6	160	601	160	-601	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATACACAAATTCACGAGC	NA	NA	NA	NA	NA	NA	NA	NA	7085346	7069663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_7070587_7076094_7076185_7076634_7076844_7079022_7079148_7084521_7084669_7085047
ENSMUSG00000015222.19_66419861_66452560_1	chr1	+	1247	4	ISM	ENSMUSG00000015222.19	ENST00000447185.5	5475	12	190	25606	190	-25606	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAAGAACACACGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	66419860	66452560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66419933_66438547_66438662_66440602_66440681_66451577
ENSMUSG00000015222.19_66440628_66452790_1	chr1	+	1266	2	ISM	ENSMUSG00000015222.19	ENST00000447185.5	5475	12	20957	25376	20957	-25376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGAAGATAAATCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	66440627	66452790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66440681_66451577
ENSMUSG00000015222.19_66454074_66455540_1	chr1	+	1271	2	ISM	ENSMUSG00000015222.19	ENST00000447185.5	5475	12	34403	22626	34403	-22626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCTAAAGAGGAGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	66454073	66455540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66455307_66455502
ENSMUSG00000015222.19_66454131_66455592_1	chr1	+	1266	2	ISM	ENSMUSG00000015222.19	ENST00000447185.5	5475	12	34460	22574	34460	-22574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACATAGAAAAGAAAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	66454130	66455592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66455307_66455502
ENSMUSG00000015222.19_66454186_66455669_1	chr1	+	1288	2	ISM	ENSMUSG00000015222.19	ENST00000447185.5	5475	12	34515	22497	34515	-22497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGCACGGTCTCCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	66454185	66455669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66455307_66455502
ENSMUSG00000015222.19_66454420_66459355_1	chr1	+	1291	4	ISM	ENSMUSG00000015222.19	ENST00000447185.5	5475	12	34749	18811	34749	-18811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAAAGCAAGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	66454419	66459355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66455307_66455502_66455710_66455890_66456026_66459293
ENSMUSG00000015222.19_66454609_66460949_1	chr1	+	1247	5	ISM	ENSMUSG00000015222.19	ENST00000447185.5	5475	12	34938	17217	34938	-17217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTCATCCTACTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	66454608	66460949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66455307_66455502_66455710_66455890_66456026_66459293_66459356_66460804
ENSMUSG00000015222.19_66454826_66464663_1	chr1	+	1338	6	ISM	ENSMUSG00000015222.19	ENST00000447185.5	5475	12	35155	13503	35155	-13503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCAGCCTAAGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	66454825	66464663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66455307_66455502_66455710_66455890_66456026_66459293_66459356_66460804_66460950_66464355
ENSMUSG00000015222.19_66455050_66477510_1	chr1	+	1318	8	ISM	ENSMUSG00000015222.19	ENST00000447185.5	5475	12	35379	656	35379	-656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTAATGTGAAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	66455049	66477510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66455307_66455502_66455710_66455890_66456026_66459293_66459356_66460804_66460950_66464355_66464688_66472672_66472755_66477412
ENSMUSG00000015222.19_66455270_66478167_1	chr1	+	1330	9	ISM	ENSMUSG00000015222.19	ENST00000447185.5	5475	12	35599	-1	35599	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTCCTTTAGCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	66455269	66478167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66455307_66455502_66455710_66455890_66456026_66459293_66459356_66460804_66460950_66464355_66464688_66472672_66472755_66477412_66477526_66477950
ENSMUSG00000015247.11_53011880_53021861_1	chr4	+	1353	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	0	199	0	-199	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCATTATTAAGTCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	53011879	53021861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ENSMUSG00000015247.11_53011950_53021904_1	chr4	+	1326	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	70	156	0	-156	multi-exon	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTATAATACGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	53011949	53021904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ENSMUSG00000015247.11_53011950_53021929_1	chr4	+	1351	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	70	131	0	-131	multi-exon	FALSE	canonical	NA	NA	NA	NA	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTTTAATTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	53011949	53021929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ENSMUSG00000015247.11_53011950_53021956_1	chr4	+	1378	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	70	104	0	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACTTTACCTTGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	53011949	53021956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ENSMUSG00000015247.11_53015013_53022060_1	chr4	+	1386	5	ISM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	3133	0	3063	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATCAAGTGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	53015012	53022060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ENSMUSG00000015290.16_73410878_73411393_1	chrX	-	402	2	ISM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	886	1554	886	193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAATGGCTTGGGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	73411393	73410877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73411193_73411306
ENSMUSG00000015290.16_73411349_73412072_1	chrX	-	324	3	ISM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	207	2025	207	-278	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTAGCAGATGCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	73412072	73411348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73411516_73411758_73411865_73412021
ENSMUSG00000015291.11_73348604_73352781_1	chrX	+	1218	7	ISM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	0	2687	0	-2687	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCCTGCCATATACATT	NA	NA	NA	NA	NA	NA	NA	NA	73348603	73352781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681
ENSMUSG00000015291.11_73348742_73353703_1	chrX	+	1215	8	ISM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	138	1765	138	-1765	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATCATCCCTCAGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	73348741	73353703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681_73352782_73353568
ENSMUSG00000015291.11_73348919_73354271_1	chrX	+	1248	10	ISM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	315	1197	315	-1197	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTGATGATGGTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	73348918	73354271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243
ENSMUSG00000015291.11_73349027_73354438_1	chrX	+	1213	11	FSM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	423	1030	423	-1030	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCAATGACATCAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	73349026	73354438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
ENSMUSG00000015291.11_73350185_73354542_1	chrX	+	1296	10	ISM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	1581	926	1581	-926	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCTGACTCCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	73350184	73354542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
ENSMUSG00000015291.11_73350760_73354762_1	chrX	+	1257	8	ISM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	2156	706	2156	-706	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTCCTTGTTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	73350759	73354762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73350844_73351277_73351477_73351735_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
ENSMUSG00000015291.11_73351736_73354967_1	chrX	+	1179	6	ISM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	3132	501	3132	-501	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCTTAGTCCCAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	73351735	73354967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
ENSMUSG00000015291.11_73351764_73355041_1	chrX	+	1225	6	ISM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	3160	427	3160	-427	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGACCCTCCCAGCACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	73351763	73355041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
ENSMUSG00000015291.11_73351825_73355086_1	chrX	+	1209	6	ISM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	3221	382	3221	-382	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTATAATTTATTCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	73351824	73355086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
ENSMUSG00000015291.11_73352767_73355236_1	chrX	+	1231	5	ISM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	4163	232	4163	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGTTGATCTGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	73352766	73355236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
ENSMUSG00000015291.11_73353987_73355468_1	chrX	+	1285	3	ISM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	5383	0	5383	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	73353986	73355468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73354141_73354243_73354299_73354392
ENSMUSG00000015335.17_29981129_29981803_1	chr2	-	575	2	ISM	ENSMUSG00000015335.17	ENSMUST00000081838.7	1187	5	1844	166	1844	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCCCTGCCACCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	29981803	29981128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_29981579_29981678
ENSMUSG00000015335.17_29981707_29983498_1	chr2	-	394	4	ISM	ENSMUSG00000015335.17	ENSMUST00000081838.7	1187	5	149	744	149	-744	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCTGTGGGGCCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	29983498	29981706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_29981846_29981999_29982078_29982416_29982554_29983458
ENSMUSG00000015341.18_23731940_23747082_1	chr8	-	1206	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	8	578	8	-571	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCAGCTCTGCCCGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	23747082	23731939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
ENSMUSG00000015354.9_95519841_95577129_1	chr9	+	1231	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	187	3020	187	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAACAAGCAGTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	95519840	95577129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ENSMUSG00000015354.9_95520711_95577148_1	chr9	+	919	6	FSM	ENSMUSG00000015354.9	ENST00000485766.1	927	6	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGAGCTCTGTCACATAA	NA	NA	NA	NA	NA	NA	NA	NA	95520710	95577148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95576676_95576845_95577018
ENSMUSG00000015354.9_95520711_95577148_2	chr9	+	918	6	NNC	ENSMUSG00000015354.9	novel	927	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGAGCTCTGTCACATAA	NA	NA	NA	NA	NA	NA	NA	NA	95520710	95577148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95576676_95576845_95577019
ENSMUSG00000015354.9_95520711_95577148_3	chr9	+	912	6	NNC	ENSMUSG00000015354.9	novel	927	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGAGCTCTGTCACATAA	NA	NA	NA	NA	NA	NA	NA	NA	95520710	95577148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_95520814_95552057_95552314_95560397_95560523_95563592_95563723_95576676_95576845_95577018
ENSMUSG00000015354.9_95520771_95577538_1	chr9	+	1529	8	FSM	ENSMUSG00000015354.9	ENST00000648195.1	1597	8	68	0	68	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTCTTTTTTTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	95520770	95577538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576635_95576845_95577018
ENSMUSG00000015354.9_95552137_95577400_1	chr9	+	1228	7	ISM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	32483	2749	31434	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACATCTGGAAGCTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	95552136	95577400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ENSMUSG00000015354.9_95552182_95577463_1	chr9	+	1246	7	ISM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	32528	2686	31479	-75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATACAAAGGATTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	95552181	95577463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ENSMUSG00000015354.9_95560422_95577625_1	chr9	+	1252	6	ISM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	40768	2524	39719	87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCCCAGAAAATACAACTG	NA	NA	NA	NA	NA	NA	NA	NA	95560421	95577625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ENSMUSG00000015354.9_95568817_95577954_1	chr9	+	1265	4	ISM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	49163	2195	48114	416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTCGAAGCCCCAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	95568816	95577954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95568894_95574913_95574998_95576676_95576845_95577018
ENSMUSG00000015354.9_95576716_95578120_1	chr9	+	1231	2	ISM	ENSMUSG00000015354.9	ENST00000648195.1	1597	8	56013	-582	56013	582	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCAGTTGAGATGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	95576715	95578120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95576845_95577018
ENSMUSG00000015354.9_95576760_95578179_1	chr9	+	1246	2	ISM	ENSMUSG00000015354.9	ENST00000648195.1	1597	8	56057	-641	56057	641	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTCCTAGGAGATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	95576759	95578179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95576845_95577018
ENSMUSG00000015357.11_65201614_65237213_1	chr9	+	2087	14	FSM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	72	726	37	-726	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCCCTGTTCTTTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	65201613	65237213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ENSMUSG00000015357.11_65201614_65237260_1	chr9	+	2134	14	FSM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	72	679	37	-679	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCATTGAATCTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	65201613	65237260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ENSMUSG00000015357.11_65201736_65237256_1	chr9	+	2008	14	FSM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	194	683	159	-683	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAAAGGCATTGAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	65201735	65237256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ENSMUSG00000015357.11_65201787_65237312_1	chr9	+	2013	14	FSM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	245	627	210	-627	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATCGGATCATGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	65201786	65237312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ENSMUSG00000015357.11_65207309_65237507_1	chr9	+	2021	13	ISM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	5767	432	5732	-432	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTAAAGATGAGAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	65207308	65237507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ENSMUSG00000015357.11_65209219_65237642_1	chr9	+	2029	12	ISM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	7677	297	7642	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAGAATACCTTGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	65209218	65237642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ENSMUSG00000015357.11_65217434_65237837_1	chr9	+	2040	10	ISM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	15892	102	15857	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATATTTAGAAGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	65217433	65237837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ENSMUSG00000015357.11_65219378_65237939_1	chr9	+	1984	9	ISM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	17836	0	17801	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAATTTGTTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	65219377	65237939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ENSMUSG00000015363.14_88960216_88969245_1	chr15	+	832	7	ISM	ENSMUSG00000015363.14	ENSMUST00000169891.8	1422	10	-81	1088	0	-1088	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACAGCCTCCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	88960215	88969245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88960345_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105
ENSMUSG00000015363.14_88965182_88969512_1	chr15	+	740	7	ISM	ENSMUSG00000015363.14	ENSMUST00000165690.2	1941	10	4855	824	4855	-821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAGCAGATGATGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	88965181	88969512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476
ENSMUSG00000015363.14_88965554_88969649_1	chr15	+	813	6	ISM	ENSMUSG00000015363.14	ENSMUST00000165690.2	1941	10	5227	687	5227	-684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGGAAAGGTCAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	88965553	88969649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476
ENSMUSG00000015363.14_88966154_88969840_1	chr15	+	844	6	ISM	ENSMUSG00000015363.14	ENSMUST00000165690.2	1941	10	5827	496	5827	-493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGCCTCCCCACATCA	NA	NA	NA	NA	NA	NA	NA	NA	88966153	88969840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728
ENSMUSG00000015363.14_88966288_88969989_1	chr15	+	741	7	ISM	ENSMUSG00000015363.14	ENSMUST00000165690.2	1941	10	5961	347	5961	-344	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGGGTGGCTGTGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	88966287	88969989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
ENSMUSG00000015363.14_88966950_88970147_1	chr15	+	770	6	ISM	ENSMUSG00000015363.14	ENSMUST00000165690.2	1941	10	6623	189	6623	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGAGACTGCACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	88966949	88970147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
ENSMUSG00000015363.14_88969159_88970336_1	chr15	+	750	4	ISM	ENSMUSG00000015363.14	ENSMUST00000165690.2	1941	10	8832	0	8832	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCTTCCCAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	88969158	88970336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88969246_88969476_88969650_88969728_88969841_88969958
ENSMUSG00000015363.14_88969728_88970565_1	chr15	+	720	2	ISM	ENSMUSG00000015363.14	ENSMUST00000165690.2	1941	10	9401	-229	9401	229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGGGTTTGGGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	88969727	88970565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88969841_88969958
ENSMUSG00000015363.14_88969768_88970631_1	chr15	+	746	2	ISM	ENSMUSG00000015363.14	ENSMUST00000165690.2	1941	10	9441	-295	9441	295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATGCATGTGGCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	88969767	88970631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88969841_88969958
ENSMUSG00000015363.14_88969799_88970712_1	chr15	+	796	2	ISM	ENSMUSG00000015363.14	ENSMUST00000165690.2	1941	10	9472	-376	9472	376	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTTTTAATGTCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	88969798	88970712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88969841_88969958
ENSMUSG00000015461.16_34870821_34872060_1	chr17	+	353	3	ISM	ENSMUSG00000015461.16	ENSMUST00000173984.2	2315	18	4636	1793	4636	-1793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCTGAGGTGTGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	34870820	34872060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34870896_34871621_34871802_34871962
ENSMUSG00000015478.14_34820525_34821076_1	chr17	-	307	4	ISM	ENSMUSG00000015478.14	ENSMUST00000015622.8	1238	6	1588	460	1588	-460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTCCAGCTAGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	34821076	34820524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058
ENSMUSG00000015478.14_34820588_34821116_1	chr17	-	284	4	ISM	ENSMUSG00000015478.14	ENSMUST00000015622.8	1238	6	1548	523	1548	-523	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCCTCGCCATCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34821116	34820587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058
ENSMUSG00000015478.14_34820756_34822356_1	chr17	-	313	5	ISM	ENSMUSG00000015478.14	ENSMUST00000015622.8	1238	6	308	691	308	-691	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGTGTTCAATGCCCATG	NA	NA	NA	NA	NA	NA	NA	NA	34822356	34820755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34820833_34820907_34820963_34821058_34821172_34821264_34821284_34822307
ENSMUSG00000015478.14_34821059_34822508_1	chr17	-	326	2	NNC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	156	-994	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGACCCAACACGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	34822508	34821058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_34821172_34822295
ENSMUSG00000015488.15_26899938_26909041_1	chr2	+	629	5	FSM	ENSMUSG00000015488.15	ENSMUST00000114007.8	2689	5	0	2060	0	-1269	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGGAGAAGACTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	26899937	26909041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_26900118_26904104_26904178_26905495_26905622_26908384_26908493_26908899
ENSMUSG00000015488.15_26900094_26909169_1	chr2	+	601	5	FSM	ENSMUSG00000015488.15	ENSMUST00000114007.8	2689	5	156	1932	156	-1141	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCGAAGGCCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	26900093	26909169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_26900118_26904104_26904178_26905495_26905622_26908384_26908493_26908899
ENSMUSG00000015488.15_26908401_26909462_1	chr2	+	655	2	ISM	ENSMUSG00000015488.15	ENSMUST00000114003.2	727	6	7796	848	7796	-848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTCACTTGAGAATCTAC	NA	NA	NA	NA	NA	NA	NA	NA	26908400	26909462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26908493_26908899
ENSMUSG00000015501.11_14009561_14018047_1	chr10	+	317	3	ISM	ENSMUSG00000015501.11	ENST00000367603.8	9607	10	166799	9072	166799	-8286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATGACATCAGTAGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	14009560	14018047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_14009639_14015128_14015305_14017984
ENSMUSG00000015501.11_14015151_14018827_1	chr10	+	281	3	ISM	ENSMUSG00000015501.11	ENST00000367603.8	9607	10	172389	8292	172389	-7506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAGAAGCACAGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	14015150	14018827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_14015305_14017984_14018087_14018802
ENSMUSG00000015501.11_14019605_14024868_1	chr10	+	307	2	ISM	ENSMUSG00000015501.11	ENST00000367603.8	9607	10	176843	2251	176843	-1465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCGGTTTACATCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	14019604	14024868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_14019699_14024655
ENSMUSG00000015522.19_95402920_95403515_1	chr3	+	547	2	ISM	ENSMUSG00000015522.19	ENST00000358595.10	4338	22	47238	1228	47238	633	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTCTCCTACAGACACAG	NA	NA	NA	NA	NA	NA	NA	NA	95402919	95403515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95403229_95403277
ENSMUSG00000015522.19_95402989_95403594_1	chr3	+	557	2	ISM	ENSMUSG00000015522.19	ENST00000358595.10	4338	22	47307	1149	47307	712	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTACCAAAATAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	95402988	95403594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95403229_95403277
ENSMUSG00000015522.19_95403045_95403669_1	chr3	+	576	2	ISM	ENSMUSG00000015522.19	ENST00000358595.10	4338	22	47363	1074	47363	787	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTCAGAGTCACACATG	NA	NA	NA	NA	NA	NA	NA	NA	95403044	95403669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95403229_95403277
ENSMUSG00000015536.15_114954813_114965101_1	chr13	+	994	7	FSM	ENSMUSG00000015536.15	ENSMUST00000015680.11	1152	7	0	158	0	21	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCTTTTACCTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	114954812	114965101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ENSMUSG00000015536.15_114957337_114965265_1	chr13	+	990	5	ISM	ENSMUSG00000015536.15	ENSMUST00000184672.8	1447	7	2495	0	2495	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTGTCTCCTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	114957336	114965265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ENSMUSG00000015542.18_115073982_115075452_1	chr11	-	422	3	ISM	ENSMUSG00000015542.18	ENST00000580632.5	615	5	2205	0	498	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGGAAGGCCGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	115075452	115073981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115074092_115074180_115074349_115075308
ENSMUSG00000015542.18_115073982_115075945_1	chr11	-	507	5	FSM	ENSMUSG00000015542.18	ENST00000581136.5	512	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGGAAGGCCGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	115075945	115073981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115074092_115074180_115074261_115074450_115074511_115075308_115075453_115075832
ENSMUSG00000015542.18_115073982_115075945_2	chr11	-	499	5	NNC	ENSMUSG00000015542.18	novel	512	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGGAAGGCCGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	115075945	115073981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_115074092_115074180_115074261_115074458_115074511_115075308_115075453_115075832
ENSMUSG00000015542.18_115074239_115077617_1	chr11	-	407	4	ISM	ENSMUSG00000015542.18	ENST00000580632.5	615	5	40	257	40	-257	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCGGGCAAGAAAATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	115077617	115074238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115074349_115075308_115075453_115075832_115075943_115077574
ENSMUSG00000015568.17_69340163_69348471_1	chr8	+	543	4	ISM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	7020	11115	7020	-11115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAATGGAGGCACTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	69340162	69348471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_69340256_69345246_69345427_69347278_69347391_69348313
ENSMUSG00000015568.17_69345319_69349322_1	chr8	+	526	4	ISM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	12176	10264	12176	-10264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCCCAGCAAGGCATAC	NA	NA	NA	NA	NA	NA	NA	NA	69345318	69349322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_69345427_69347278_69347391_69348313_69348548_69349250
ENSMUSG00000015568.17_69345386_69349375_1	chr8	+	512	4	ISM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	12243	10211	12243	-10211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCCTGAGTTGTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	69345385	69349375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_69345427_69347278_69347391_69348313_69348548_69349250
ENSMUSG00000015568.17_69348467_69353873_1	chr8	+	519	4	ISM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	15324	5713	15324	-5713	internal_fragment	TRUE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCTTAAGTGGATAAGC	NA	NA	NA	NA	NA	NA	NA	NA	69348466	69353873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_69348548_69349250_69349494_69352068_69352190_69353799
ENSMUSG00000015568.17_69349359_69355017_1	chr8	+	521	4	ISM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	16216	4569	16216	-4569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAAGAAGTCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	69349358	69355017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_69349494_69352068_69352190_69353799_69353983_69354935
ENSMUSG00000015568.17_69349473_69357238_1	chr8	+	508	5	ISM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	16330	2348	16330	-2348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATACCCTTGTTTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	69349472	69357238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_69349494_69352068_69352190_69353799_69353983_69354935_69355038_69357157
ENSMUSG00000015568.17_69352161_69357354_1	chr8	+	511	4	ISM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	19018	2232	19018	-2232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAATCTAATGGCCCATAG	NA	NA	NA	NA	NA	NA	NA	NA	69352160	69357354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_69352190_69353799_69353983_69354935_69355038_69357157
ENSMUSG00000015568.17_69353914_69357485_1	chr8	+	499	3	ISM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	20771	2101	20771	-2101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCATGGTCTAAAATTAGT	NA	NA	NA	NA	NA	NA	NA	NA	69353913	69357485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_69353983_69354935_69355038_69357157
ENSMUSG00000015575.16_26895344_26918621_1	chr17	+	816	4	NNC	ENSMUSG00000015575.16	novel	823	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	26895343	26918621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_26895553_26901651_26901700_26914328_26914459_26918192
ENSMUSG00000015579.6_27057638_27060285_1	chr17	-	1271	2	FSM	ENSMUSG00000015579.6	ENSMUST00000015723.5	1525	2	254	0	254	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGGCTTCTTTTAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	27060285	27057637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_27058622_27059998
ENSMUSG00000015652.10_5786529_5789826_1	chr5	-	176	2	ISM	ENSMUSG00000015652.10	ENSMUST00000015796.9	1230	5	9500	212	9500	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAAAATCGCCCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	5789826	5786528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_5786674_5789795
ENSMUSG00000015652.10_5786629_5789933_1	chr5	-	183	2	ISM	ENSMUSG00000015652.10	ENSMUST00000015796.9	1230	5	9393	312	9393	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTTGCCTGGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	5789933	5786628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_5786674_5789795
ENSMUSG00000015652.10_5790764_5792893_1	chr5	-	167	2	ISM	ENSMUSG00000015652.10	ENSMUST00000015796.9	1230	5	6433	4447	6433	-4447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACACGCAGGAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	5792893	5790763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_5790863_5792825
ENSMUSG00000015652.10_5790822_5792941_1	chr5	-	157	2	ISM	ENSMUSG00000015652.10	ENSMUST00000015796.9	1230	5	6385	4505	6385	-4505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGCACTTGCAGCACG	NA	NA	NA	NA	NA	NA	NA	NA	5792941	5790821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_5790863_5792825
ENSMUSG00000015656.18_40712380_40713321_1	chr9	+	373	2	ISM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	100	3175	100	-3093	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGCACCACGCCAAGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	40712379	40713321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40712645_40713213
ENSMUSG00000015656.18_40712572_40713794_1	chr9	+	364	3	ISM	ENSMUSG00000015656.18	ENSMUST00000117557.8	2019	9	-26	2702	-26	-2620	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGCAGGCAGGCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	40712571	40713794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40712645_40713213_40713424_40713713
ENSMUSG00000015656.18_40713297_40716496_1	chr9	+	1940	8	FSM	ENSMUSG00000015656.18	ENST00000419827.2	1938	8	80	-82	80	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	40713296	40716496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_40713424_40713713_40713920_40714034_40714188_40714269_40714820_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ENSMUSG00000015656.18_40713326_40714208_1	chr9	+	478	3	ISM	ENSMUSG00000015656.18	ENST00000419827.2	1938	8	109	2206	109	-2206	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTTGTTAGGGTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	40713325	40714208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40713424_40713713_40713920_40714034
ENSMUSG00000015656.18_40713820_40714372_1	chr9	+	356	3	ISM	ENSMUSG00000015656.18	ENST00000419827.2	1938	8	603	2042	603	-2042	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGACACCCACTTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	40713819	40714372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40713920_40714034_40714188_40714269
ENSMUSG00000015656.18_40714081_40714540_1	chr9	+	378	2	ISM	ENSMUSG00000015656.18	ENST00000419827.2	1938	8	864	1874	864	-1874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGTATTGAGATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	40714080	40714540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40714188_40714269
ENSMUSG00000015656.18_40714546_40715150_1	chr9	+	395	2	ISM	ENSMUSG00000015656.18	ENSMUST00000117557.8	2019	9	1948	1346	1329	-1264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCATCAAGCGCAATACCA	NA	NA	NA	NA	NA	NA	NA	NA	40714545	40715150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40714826_40715035
ENSMUSG00000015656.18_40714685_40715503_1	chr9	+	387	3	ISM	ENSMUSG00000015656.18	ENSMUST00000117557.8	2019	9	2087	993	1468	-911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAAGTTCGAGCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	40714684	40715503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40714826_40715035_40715239_40715460
ENSMUSG00000015656.18_40714733_40715633_1	chr9	+	469	3	ISM	ENSMUSG00000015656.18	ENSMUST00000117557.8	2019	9	2135	863	1516	-781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGATCACCATCACCAATG	NA	NA	NA	NA	NA	NA	NA	NA	40714732	40715633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40714826_40715035_40715239_40715460
ENSMUSG00000015656.18_40714782_40715633_1	chr9	+	420	3	ISM	ENSMUSG00000015656.18	ENSMUST00000117557.8	2019	9	2184	863	1565	-781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGATCACCATCACCAATG	NA	NA	NA	NA	NA	NA	NA	NA	40714781	40715633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40714826_40715035_40715239_40715460
ENSMUSG00000015656.18_40715103_40715787_1	chr9	+	364	3	ISM	ENSMUSG00000015656.18	ENST00000419827.2	1938	8	1886	627	1886	-627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGTCCAAGAAGCTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	40715102	40715787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40715239_40715460_40715660_40715758
ENSMUSG00000015656.18_40715153_40715838_1	chr9	+	365	3	ISM	ENSMUSG00000015656.18	ENST00000419827.2	1938	8	1936	576	1936	-576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTTCCTCCAAGAACTC	NA	NA	NA	NA	NA	NA	NA	NA	40715152	40715838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40715239_40715460_40715660_40715758
ENSMUSG00000015656.18_40715197_40715895_1	chr9	+	378	3	ISM	ENSMUSG00000015656.18	ENST00000419827.2	1938	8	1980	519	1980	-519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATGAGAAACTTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	40715196	40715895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40715239_40715460_40715660_40715758
ENSMUSG00000015656.18_40715521_40716249_1	chr9	+	394	3	ISM	ENSMUSG00000015656.18	ENST00000419827.2	1938	8	2304	165	2304	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATCAGCAGAAAGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	40715520	40716249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40715660_40715758_40715992_40716227
ENSMUSG00000015656.18_40715567_40716305_1	chr9	+	404	3	ISM	ENSMUSG00000015656.18	ENST00000419827.2	1938	8	2350	109	2350	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCAGGTGGCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	40715566	40716305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40715660_40715758_40715992_40716227
ENSMUSG00000015656.18_40715622_40716351_1	chr9	+	395	3	ISM	ENSMUSG00000015656.18	ENST00000419827.2	1938	8	2405	63	2405	-63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGGAGCTCCCCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	40715621	40716351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40715660_40715758_40715992_40716227
ENSMUSG00000015656.18_40715780_40716496_1	chr9	+	481	2	ISM	ENSMUSG00000015656.18	ENST00000419827.2	1938	8	2563	-82	2563	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	40715779	40716496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40715992_40716227
ENSMUSG00000015668.14_99666799_99668993_1	chrX	-	636	6	ISM	ENSMUSG00000015668.14	ENST00000374454.1	771	7	559	0	548	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAAAGGAGAAAGATAGT	NA	NA	NA	NA	NA	NA	NA	NA	99668993	99666798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893
ENSMUSG00000015668.14_99666983_99669541_1	chrX	-	576	7	FSM	ENSMUSG00000015668.14	ENST00000374454.1	771	7	11	184	0	-184	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCGTGTGGGATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	99669541	99666982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99669048_99669471
ENSMUSG00000015668.14_99668438_99669682_1	chrX	-	338	3	ISM	ENSMUSG00000015668.14	ENSMUST00000015812.12	1626	7	492	1946	-130	-1639	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATTGTTACACTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	99669682	99668437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_99668485_99668893_99668994_99669491
ENSMUSG00000015671.12_14787825_14799965_1	chr13	+	578	7	FSM	ENSMUSG00000015671.12	ENST00000677581.1	791	7	5	208	0	-204	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGAAGTTGGGATCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	14787824	14799965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_14787901_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_14787825_14800170_1	chr13	+	645	6	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTTTAGTTTTTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	14787824	14800170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_14787901_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799938
ENSMUSG00000015671.12_14787825_14800170_2	chr13	+	649	6	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTTTAGTTTTTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	14787824	14800170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_14787901_14793886_14794010_14795309_14795392_14798182_14798257_14799788_14799846_14799933
ENSMUSG00000015671.12_14787825_14800170_3	chr13	+	650	6	FSM	ENSMUSG00000015671.12	ENST00000445517.1	623	6	-26	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTTTAGTTTTTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	14787824	14800170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_14787901_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_14787825_14801217_1	chr13	+	1907	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	0	1004	0	-1004	multi-exon	FALSE	canonical	NA	NA	NA	NA	4641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGTGTTCTGTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	14787824	14801217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_14791357_14800030_1	chr13	+	532	6	ISM	ENSMUSG00000015671.12	ENST00000677581.1	791	7	3537	143	3506	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCTGCCATAGCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	14791356	14800030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_14791357_14801381_1	chr13	+	1883	6	ISM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	3532	840	3506	-840	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTAGTTCCAAATACCCA	NA	NA	NA	NA	NA	NA	NA	NA	14791356	14801381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_14798195_14801687_1	chr13	+	1874	3	ISM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	10370	534	10344	-534	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATTAGAACAGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	14798194	14801687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_14799813_14801832_1	chr13	+	1932	2	ISM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	11988	389	11962	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTCAGCGGTTAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	14799812	14801832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_14799846_14799933
ENSMUSG00000015697.15_95235007_95246191_1	chr3	-	963	4	ISM	ENSMUSG00000015697.15	ENST00000271640.9	4041	21	17318	3794	-15310	-3794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGGTAGATATGAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	95246191	95235006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95235148_95235858_95236029_95244459_95244577_95245656
ENSMUSG00000015697.15_95249015_95263276_1	chr3	-	654	6	NNC	ENSMUSG00000015697.15	novel	945	7	NA	NA	233	-50	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGAGTTGAAGAGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	95263276	95249014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_95249158_95252836_95252911_95254306_95254433_95255306_95255407_95261825_95262005_95263244
ENSMUSG00000015697.15_95249036_95263293_1	chr3	-	658	7	FSM	ENSMUSG00000015697.15	ENST00000368963.5	945	7	216	71	216	-71	multi-exon	FALSE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAGGCACATGGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	95263293	95249035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95249158_95252836_95252911_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244
ENSMUSG00000015697.15_95249079_95263351_1	chr3	-	673	7	FSM	ENSMUSG00000015697.15	ENST00000368963.5	945	7	158	114	158	-114	multi-exon	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATGGTACTTCTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	95263351	95249078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95249158_95252836_95252911_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244
ENSMUSG00000015697.15_95249112_95263419_1	chr3	-	708	7	FSM	ENSMUSG00000015697.15	ENST00000368963.5	945	7	90	147	90	-147	multi-exon	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGAGGAATATATCACTG	NA	NA	NA	NA	NA	NA	NA	NA	95263419	95249111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95249158_95252836_95252911_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244
ENSMUSG00000015702.14_95203407_95213709_1	chr3	-	1724	12	ISM	ENSMUSG00000015702.14	ENSMUST00000107183.8	1872	13	406	0	406	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCCTAAAACAAAGACGG	NA	NA	NA	NA	NA	NA	NA	NA	95213709	95203406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95204164_95204547_95204671_95207463_95207523_95207612_95207709_95207841_95207927_95208402_95208463_95208621_95208702_95209645_95209737_95209976_95210091_95210296_95210392_95213172_95213270_95213642
ENSMUSG00000015709.10_83899157_83993128_1	chr7	-	1818	15	ISM	ENSMUSG00000015709.10	ENST00000303329.9	2369	19	66072	1	23991	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATCTCCCTTATTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	83993128	83899156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_83899363_83900573_83900711_83911600_83911767_83912386_83912526_83914782_83914883_83917112_83917237_83918046_83918120_83924542_83924695_83931304_83931380_83933200_83933336_83934981_83935059_83954004_83954091_83954401_83954468_83960080_83960184_83992949
ENSMUSG00000015709.10_83899284_83996653_1	chr7	-	1830	16	ISM	ENSMUSG00000015709.10	ENST00000303329.9	2369	19	62547	128	20466	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCCATTTTCTGAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	83996653	83899283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_83899363_83900573_83900711_83911600_83911767_83912386_83912526_83914782_83914883_83917112_83917237_83918046_83918120_83924542_83924695_83931304_83931380_83933200_83933336_83934981_83935059_83954004_83954091_83954401_83954468_83960080_83960184_83992949_83993164_83996549
ENSMUSG00000015709.10_83899284_83996712_1	chr7	-	1889	16	ISM	ENSMUSG00000015709.10	ENST00000303329.9	2369	19	62488	128	20407	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCCATTTTCTGAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	83996712	83899283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_83899363_83900573_83900711_83911600_83911767_83912386_83912526_83914782_83914883_83917112_83917237_83918046_83918120_83924542_83924695_83931304_83931380_83933200_83933336_83934981_83935059_83954004_83954091_83954401_83954468_83960080_83960184_83992949_83993164_83996549
ENSMUSG00000015709.10_83911601_84010881_1	chr7	-	1892	16	ISM	ENSMUSG00000015709.10	ENST00000303329.9	2369	19	48319	12445	6238	-12445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTAGGGGATAAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	84010881	83911600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_83911767_83912386_83912526_83914782_83914883_83917112_83917237_83918046_83918120_83924542_83924695_83931304_83931380_83933200_83933336_83934981_83935059_83954004_83954091_83954401_83954468_83960080_83960184_83992949_83993164_83996549_83996764_84003727_84003776_84010761
ENSMUSG00000015709.10_83911709_84059171_1	chr7	-	1888	17	ISM	ENSMUSG00000015709.10	ENST00000303329.9	2369	19	29	12553	29	-12553	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTACCCGGCTGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	84059171	83911708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_83911767_83912386_83912526_83914782_83914883_83917112_83917237_83918046_83918120_83924542_83924695_83931304_83931380_83933200_83933336_83934981_83935059_83954004_83954091_83954401_83954468_83960080_83960184_83992949_83993164_83996549_83996764_84003727_84003776_84010761_84010877_84059062
ENSMUSG00000015711.9_95161574_95165405_1	chr3	-	1233	2	ISM	ENSMUSG00000015711.9	ENST00000368936.5	1441	7	23648	-573	23648	573	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCAGTCTTTTTCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	95165405	95161573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95162739_95165337
ENSMUSG00000015711.9_95162147_95170973_1	chr3	-	1076	5	ISM	ENSMUSG00000015711.9	ENST00000368936.5	1441	7	18080	0	18080	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGACAGCTCTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	95170973	95162146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902
ENSMUSG00000015711.9_95162189_95172800_1	chr3	-	1220	6	ISM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	16587	1204	16253	-42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATAACCTTGGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	95172800	95162188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728
ENSMUSG00000015711.9_95162273_95172879_1	chr3	-	1215	6	ISM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	16508	1288	16174	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGGCCTGCCTCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	95172879	95162272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728
ENSMUSG00000015711.9_95162518_95188994_1	chr3	-	1011	7	FSM	ENSMUSG00000015711.9	ENST00000368936.5	1441	7	59	371	59	-371	multi-exon	FALSE	canonical	NA	NA	NA	NA	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGACTTGGACAAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	95188994	95162517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95175541_95175635_95188895
ENSMUSG00000015711.9_95162561_95189014_1	chr3	-	988	7	FSM	ENSMUSG00000015711.9	ENST00000368936.5	1441	7	39	414	39	-414	multi-exon	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTCTGAGGTAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	95189014	95162560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95175541_95175635_95188895
ENSMUSG00000015711.9_95162624_95189099_1	chr3	-	1213	8	FSM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	288	1639	-46	-477	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTGTGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	95189099	95162623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
ENSMUSG00000015711.9_95165383_95189267_1	chr3	-	1221	7	ISM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	120	4398	120	-3236	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCAATTAGCTATCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	95189267	95165382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
ENSMUSG00000015711.9_95165448_95189387_1	chr3	-	1276	7	ISM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	0	4463	0	-3301	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATCACAGCTATGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	95189387	95165447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
ENSMUSG00000015714.12_95222395_95230178_1	chr3	+	1478	11	NNC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	0	-732	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGGGAGAAAGGATATGA	NA	NA	NA	NA	NA	NA	NA	NA	95222394	95230178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228258_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ENSMUSG00000015714.12_95222558_95230219_1	chr3	+	1362	11	FSM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	163	691	163	-691	multi-exon	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTTTCACCCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	95222557	95230219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ENSMUSG00000015714.12_95222558_95230288_1	chr3	+	1431	11	FSM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	163	622	163	-622	multi-exon	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACATCCACATCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	95222557	95230288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ENSMUSG00000015714.12_95222578_95230325_1	chr3	+	1448	11	FSM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	183	585	183	-585	multi-exon	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTCTACCTTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	95222577	95230325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ENSMUSG00000015714.12_95227444_95230440_1	chr3	+	1413	10	ISM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	5049	470	5049	-470	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCCTGACTTCAAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	95227443	95230440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ENSMUSG00000015714.12_95227444_95230495_1	chr3	+	1468	10	ISM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	5049	415	5049	-415	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCAAAGCTGGACCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	95227443	95230495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ENSMUSG00000015714.12_95227444_95230505_1	chr3	+	1478	10	ISM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	5049	405	5049	-405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACCAAGGTTCCATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	95227443	95230505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ENSMUSG00000015714.12_95228030_95230668_1	chr3	+	1461	9	ISM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	5635	242	5635	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCCTCTCTGGCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	95228029	95230668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ENSMUSG00000015714.12_95228251_95230773_1	chr3	+	1527	8	ISM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	5856	137	5856	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGCCACAACTACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	95228250	95230773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ENSMUSG00000015714.12_95228506_95230910_1	chr3	+	1538	7	ISM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	6111	0	6111	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGGTTAGTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	95228505	95230910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ENSMUSG00000015733.14_17636982_17665623_1	chr6	+	1189	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	0	1348	0	-1348	multi-exon	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTTAGATAAGTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	17636981	17665623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ENSMUSG00000015733.14_17637109_17665741_1	chr6	+	1180	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	127	1230	127	-1230	multi-exon	FALSE	canonical	NA	NA	NA	NA	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAGGGTTTGAAATATC	NA	NA	NA	NA	NA	NA	NA	NA	17637108	17665741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ENSMUSG00000015733.14_17654105_17665957_1	chr6	+	1229	7	ISM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	17123	1014	17123	-1014	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGATTAGAGGGAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	17654104	17665957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ENSMUSG00000015733.14_17656309_17666039_1	chr6	+	1169	6	NNC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	19327	-932	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTTTTTAAAACAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	17656308	17666039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665055_17665113_17665293
ENSMUSG00000015733.14_17657172_17666112_1	chr6	+	1113	5	ISM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	20190	859	20190	-859	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGCATTTAATGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	17657171	17666112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ENSMUSG00000015733.14_17660770_17666260_1	chr6	+	1159	4	ISM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	23788	711	23788	-711	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGATTCTCCCTCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	17660769	17666260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_17660827_17662096_17662169_17665049_17665113_17665293
ENSMUSG00000015745.10_95896541_95898825_1	chr3	-	577	3	ISM	ENSMUSG00000015745.10	ENSMUST00000015889.10	1931	6	4488	800	4488	-800	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTAGCAAGGAAACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	95898825	95896540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95896946_95898112_95898215_95898755
ENSMUSG00000015745.10_95896707_95902871_1	chr3	-	625	5	ISM	ENSMUSG00000015745.10	ENSMUST00000015889.10	1931	6	442	966	442	-966	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCACTGAAGAAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	95902871	95896706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95896946_95898112_95898215_95898755_95898861_95899449_95899591_95902833
ENSMUSG00000015745.10_95896820_95902980_1	chr3	-	621	5	ISM	ENSMUSG00000015745.10	ENSMUST00000015889.10	1931	6	333	1079	333	-1079	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGGCAGTCGACGGAG	NA	NA	NA	NA	NA	NA	NA	NA	95902980	95896819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95896946_95898112_95898215_95898755_95898861_95899449_95899591_95902833
ENSMUSG00000015745.10_95896895_95902980_1	chr3	-	546	5	ISM	ENSMUSG00000015745.10	ENSMUST00000015889.10	1931	6	333	1154	333	-1154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACCCTTCCCCTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	95902980	95896894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95896946_95898112_95898215_95898755_95898861_95899449_95899591_95902833
ENSMUSG00000015745.10_95898780_95903313_1	chr3	-	600	4	ISM	ENSMUSG00000015745.10	ENSMUST00000015889.10	1931	6	0	3039	0	-3039	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAAAACCGTATCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	95903313	95898779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95898861_95899449_95899591_95902833_95902981_95903082
ENSMUSG00000015747.6_95907144_95954360_1	chr3	-	1420	10	ISM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	11418	0	10885	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTCAGTGTTTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	95954360	95907143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95907464_95926920_95927053_95938317_95938440_95940090_95940199_95940976_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95954309
ENSMUSG00000015747.6_95907376_95954612_1	chr3	-	1329	11	ISM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	11166	232	10633	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCAGTGGAGAGCGGCG	NA	NA	NA	NA	NA	NA	NA	NA	95954612	95907375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95907464_95926920_95927053_95938317_95938440_95940090_95940199_95940976_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95954309_95954448_95954558
ENSMUSG00000015747.6_95926921_95950240_1	chr3	-	938	7	ISM	ENSMUSG00000015747.6	ENST00000535106.5	1577	12	15005	0	15005	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGACCCCCTCGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	95950240	95926920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95927053_95938317_95938440_95940090_95940199_95940976_95941136_95948649_95948818_95949620_95949735_95950105
ENSMUSG00000015747.6_95926921_95960411_1	chr3	-	1397	12	ISM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	5367	19777	4834	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGACCCCCTCGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	95960411	95926920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95927053_95938317_95938440_95940090_95940199_95940976_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95954309_95954448_95954558_95954628_95955619_95955700_95960350
ENSMUSG00000015747.6_95938317_95955699_1	chr3	-	998	8	ISM	ENSMUSG00000015747.6	ENST00000535106.5	1577	12	9546	11396	9546	-11396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGGTAACAAAGATTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	95955699	95938316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95938440_95940090_95940199_95940976_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95955619
ENSMUSG00000015747.6_95938317_95964426_1	chr3	-	1401	12	ISM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	1352	31173	819	-11396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGGTAACAAAGATTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	95964426	95938316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95938440_95940090_95940199_95940976_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95954309_95954448_95954558_95954628_95955619_95955700_95960350_95960412_95964291
ENSMUSG00000015747.6_95940090_95965062_1	chr3	-	1348	12	ISM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	716	32946	183	-13169	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGCTTTAGTCTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	95965062	95940089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95940199_95940976_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95954309_95954448_95954558_95954628_95955619_95955700_95960350_95960412_95964291_95964427_95964993
ENSMUSG00000015747.6_95940139_95964341_1	chr3	-	938	9	ISM	ENSMUSG00000015747.6	ENST00000535106.5	1577	12	904	13218	904	-13218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAAGATGCTGTGGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	95964341	95940138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95940199_95940976_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95955619_95955700_95960350_95960412_95964291
ENSMUSG00000015747.6_95940977_95965062_1	chr3	-	1032	9	ISM	ENSMUSG00000015747.6	ENST00000535106.5	1577	12	183	14056	183	-14056	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCTGATGAGTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	95965062	95940976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95955619_95955700_95960350_95960412_95964291_95964427_95964993
ENSMUSG00000015747.6_95941019_95965213_1	chr3	-	1348	11	ISM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	565	33875	32	-14098	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGACCTCAGGAGTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	95965213	95941018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95954309_95954448_95954558_95954628_95955619_95955700_95960350_95960412_95964291_95964427_95964993
ENSMUSG00000015747.6_95941109_95965062_1	chr3	-	900	9	ISM	ENSMUSG00000015747.6	ENST00000535106.5	1577	12	183	14188	183	-14188	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCACAGAATTTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	95965062	95941108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95955619_95955700_95960350_95960412_95964291_95964427_95964993
ENSMUSG00000015747.6_95948694_95965363_1	chr3	-	1337	10	ISM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	415	41550	-118	-21773	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGAACTGGCCTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	95965363	95948693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95954309_95954448_95954558_95954628_95955619_95955700_95960350_95960412_95964291_95964427_95964993
ENSMUSG00000015747.6_95948751_95965422_1	chr3	-	1339	10	ISM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	356	41607	-177	-21830	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGGAACTGTCTCGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	95965422	95948750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95954309_95954448_95954558_95954628_95955619_95955700_95960350_95960412_95964291_95964427_95964993
ENSMUSG00000015747.6_95949665_95965523_1	chr3	-	1329	9	ISM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	255	42521	255	-22744	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACCAAAAGAGCAGCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	95965523	95949664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95949735_95950105_95950241_95953663_95953775_95954309_95954448_95954558_95954628_95955619_95955700_95960350_95960412_95964291_95964427_95964993
ENSMUSG00000015747.6_95949717_95965587_1	chr3	-	1341	9	ISM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	191	42573	191	-22796	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGAGATTGGTAGCAATAT	NA	NA	NA	NA	NA	NA	NA	NA	95965587	95949716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95949735_95950105_95950241_95953663_95953775_95954309_95954448_95954558_95954628_95955619_95955700_95960350_95960412_95964291_95964427_95964993
ENSMUSG00000015747.6_95950195_95965778_1	chr3	-	1425	8	ISM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	0	43051	0	-23274	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGATTGATCTTTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	95965778	95950194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95950241_95953663_95953775_95954309_95954448_95954558_95954628_95955619_95955700_95960350_95960412_95964291_95964427_95964993
ENSMUSG00000015748.14_95738138_95756375_1	chr3	-	1810	13	NNC	ENSMUSG00000015748.14	novel	1945	14	NA	NA	2631	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTGAGACTACTGTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	95756375	95738137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741555_95742661_95742780_95742955_95743056_95743725_95743870_95747981_95748057_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226
ENSMUSG00000015748.14_95738138_95758953_1	chr3	-	1892	14	FSM	ENSMUSG00000015748.14	ENST00000519029.1	1945	14	53	0	53	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTGAGACTACTGTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	95758953	95738137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741555_95742661_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874
ENSMUSG00000015749.13_95836595_95842210_1	chr3	+	641	3	ISM	ENSMUSG00000015749.13	ENSMUST00000015893.13	1381	7	5	10667	0	-10420	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGAGGGTGTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	95836594	95842210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95836963_95841220_95841371_95842087
ENSMUSG00000015749.13_95836595_95854581_1	chr3	+	1381	6	FSM	ENSMUSG00000015749.13	ENST00000629042.2	1540	6	38	121	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGGACGGGCAGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	95836594	95854581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95836963_95844458_95844508_95845193_95845352_95851618_95851674_95852491_95852884_95854222
ENSMUSG00000015749.13_95836595_95854702_1	chr3	+	1502	6	FSM	ENSMUSG00000015749.13	ENST00000629042.2	1540	6	38	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTCAGTGTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	95836594	95854702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95836963_95844458_95844508_95845193_95845352_95851618_95851674_95852491_95852884_95854222
ENSMUSG00000015749.13_95836698_95854129_1	chr3	+	2561	7	FSM	ENSMUSG00000015749.13	ENSMUST00000165307.8	3274	7	140	573	0	-452	multi-exon	FALSE	canonical	NA	NA	NA	NA	2391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAATGTGTACTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	95836697	95854129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUSG00000015749.13_95836698_95854189_1	chr3	+	2621	7	FSM	ENSMUSG00000015749.13	ENSMUST00000165307.8	3274	7	140	513	0	-392	multi-exon	FALSE	canonical	NA	NA	NA	NA	2462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTTCAGTAATTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	95836697	95854189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUSG00000015749.13_95836698_95854702_1	chr3	+	1399	6	FSM	ENSMUSG00000015749.13	ENST00000629042.2	1540	6	141	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTCAGTGTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	95836697	95854702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95836963_95844458_95844508_95845193_95845352_95851618_95851674_95852491_95852884_95854222
ENSMUSG00000015749.13_95836698_95854702_2	chr3	+	1396	6	NNC	ENSMUSG00000015749.13	novel	1540	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	3381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTCAGTGTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	95836697	95854702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_95836963_95844461_95844508_95845193_95845352_95851618_95851674_95852491_95852884_95854222
ENSMUSG00000015749.13_95836698_95854702_3	chr3	+	1397	6	NNC	ENSMUSG00000015749.13	novel	1540	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTCAGTGTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	95836697	95854702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_95836963_95844458_95844508_95845193_95845352_95851618_95851674_95852493_95852884_95854222
ENSMUSG00000015749.13_95836853_95852754_1	chr3	+	804	5	FSM	ENSMUSG00000015749.13	ENST00000533654.5	851	5	88	-41	-41	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTCTCATTCATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	95836852	95852754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95845193_95845352_95852491
ENSMUSG00000015749.13_95836853_95854274_1	chr3	+	2551	7	FSM	ENSMUSG00000015749.13	ENSMUST00000165307.8	3274	7	295	428	-41	-307	multi-exon	FALSE	canonical	NA	NA	NA	NA	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAATGAAATCTATA	NA	NA	NA	NA	NA	NA	NA	NA	95836852	95854274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUSG00000015749.13_95836894_95845356_1	chr3	+	677	5	ISM	ENSMUSG00000015749.13	ENSMUST00000015893.13	1381	7	304	7521	0	-7274	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAACTTGTTGTTCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	95836893	95845356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193
ENSMUSG00000015749.13_95841219_95851673_1	chr3	+	660	5	ISM	ENSMUSG00000015749.13	ENST00000616917.4	1409	7	-2	2908	-2	-957	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGCTTGGCCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	95841218	95851673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618
ENSMUSG00000015749.13_95841236_95854421_1	chr3	+	2573	6	ISM	ENSMUSG00000015749.13	ENST00000616917.4	1409	7	15	160	15	-160	intron_retention	FALSE	canonical	NA	NA	NA	NA	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCAAGGGTGGGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	95841235	95854421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUSG00000015749.13_95841292_95854478_1	chr3	+	2574	6	ISM	ENSMUSG00000015749.13	ENST00000616917.4	1409	7	71	103	71	-103	intron_retention	FALSE	canonical	NA	NA	NA	NA	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTGTGCGTGTGTATAC	NA	NA	NA	NA	NA	NA	NA	NA	95841291	95854478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUSG00000015749.13_95841321_95852630_1	chr3	+	697	6	ISM	ENSMUSG00000015749.13	ENST00000616917.4	1409	7	100	1951	100	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGATAGCTGTCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	95841320	95852630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUSG00000015749.13_95842086_95854581_1	chr3	+	2600	5	ISM	ENSMUSG00000015749.13	ENST00000616917.4	1409	7	865	0	865	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGGACGGGCAGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	95842085	95854581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUSG00000015749.13_95844335_95852754_1	chr3	+	649	4	ISM	ENSMUSG00000015749.13	ENST00000616917.4	1409	7	3114	1827	3114	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTCTCATTCATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	95844334	95852754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUSG00000015749.13_95844335_95854702_1	chr3	+	2597	4	ISM	ENSMUSG00000015749.13	ENST00000616917.4	1409	7	3114	-121	3114	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTCAGTGTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	95844334	95854702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUSG00000015749.13_95852745_95854702_1	chr3	+	619	2	ISM	ENSMUSG00000015749.13	ENST00000616917.4	1409	7	11524	-121	11524	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTCAGTGTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	95852744	95854702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95852884_95854222
ENSMUSG00000015750.16_95801281_95804324_1	chr3	+	1044	6	FSM	ENSMUSG00000015750.16	ENST00000414276.6	1569	6	68	457	0	-433	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAAGTGGGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	95801280	95804324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95801596_95802268_95802304_95802759_95802883_95803029_95803158_95803548_95803673_95804005
ENSMUSG00000015750.16_95801367_95804462_1	chr3	+	1096	6	FSM	ENSMUSG00000015750.16	ENST00000414276.6	1569	6	154	319	0	-295	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGTGCATGCTTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	95801366	95804462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95801596_95802268_95802304_95802759_95802883_95803029_95803158_95803548_95803673_95804005
ENSMUSG00000015750.16_95801468_95804517_1	chr3	+	1050	6	FSM	ENSMUSG00000015750.16	ENST00000414276.6	1569	6	255	264	101	-240	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCAGCACCCCTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	95801467	95804517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95801596_95802268_95802304_95802759_95802883_95803029_95803158_95803548_95803673_95804005
ENSMUSG00000015750.16_95801538_95804618_1	chr3	+	1291	7	FSM	ENSMUSG00000015750.16	ENSMUST00000056710.10	1601	7	171	139	171	-139	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCCCAGAGGGCAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	95801537	95804618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548_95803673_95804005
ENSMUSG00000015750.16_95802180_95804757_1	chr3	+	1325	6	ISM	ENSMUSG00000015750.16	ENSMUST00000056710.10	1601	7	813	0	813	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAGGACTTTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	95802179	95804757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548_95803673_95804005
ENSMUSG00000015750.16_95803078_95803910_1	chr3	+	442	2	ISM	ENSMUSG00000015750.16	ENSMUST00000056710.10	1601	7	1711	847	1711	-847	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCACCTGGGGACCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	95803077	95803910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95803158_95803548
ENSMUSG00000015755.17_7782725_7786916_1	chr10	-	762	3	ISM	ENSMUSG00000015755.17	ENST00000636456.1	2972	6	45111	1074	45078	-1074	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGGACATCTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	7786916	7782724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7783342_7785810_7785892_7786852
ENSMUSG00000015755.17_7782858_7787266_1	chr10	-	774	4	ISM	ENSMUSG00000015755.17	ENST00000636456.1	2972	6	44761	1207	44728	-1207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGCTTTTGGTGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	7787266	7782857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7783342_7785810_7785892_7786852_7786947_7787151
ENSMUSG00000015755.17_7783093_7795095_1	chr10	-	803	5	ISM	ENSMUSG00000015755.17	ENST00000636456.1	2972	6	36932	1442	36899	-1442	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGACAGTGGTGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	7795095	7783092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7783342_7785810_7785892_7786852_7786947_7787151_7787313_7794877
ENSMUSG00000015755.17_7785822_7795302_1	chr10	-	750	4	ISM	ENSMUSG00000015755.17	ENST00000636456.1	2972	6	36725	4171	36692	-4171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCCAAAGGTTAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	7795302	7785821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7785892_7786852_7786947_7787151_7787313_7794877
ENSMUSG00000015755.17_7786881_7795404_1	chr10	-	754	3	ISM	ENSMUSG00000015755.17	ENST00000636456.1	2972	6	36623	5230	36590	-5230	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATTGATCTTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	7795404	7786880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7786947_7787151_7787313_7794877
ENSMUSG00000015755.17_7787256_7795508_1	chr10	-	688	2	ISM	ENSMUSG00000015755.17	ENST00000636456.1	2972	6	36519	5605	36486	-5605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAGCTGGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	7795508	7787255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7787313_7794877
ENSMUSG00000015755.17_7787256_7795561_1	chr10	-	741	2	ISM	ENSMUSG00000015755.17	ENST00000636456.1	2972	6	36466	5605	36433	-5605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAGCTGGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	7795561	7787255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7787313_7794877
ENSMUSG00000015757.11_7668685_7697109_1	chr10	+	1651	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	30	1790	30	-1790	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGAGAGGGAGGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	7668684	7697109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ENSMUSG00000015757.11_7668685_7697163_1	chr10	+	1705	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	30	1736	30	-1736	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACATGGTAACGTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	7668684	7697163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ENSMUSG00000015757.11_7674213_7697476_1	chr10	+	1633	9	ISM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	5558	1423	5558	-1423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTGTGAATGTACTACG	NA	NA	NA	NA	NA	NA	NA	NA	7674212	7697476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ENSMUSG00000015757.11_7674260_7697536_1	chr10	+	1646	9	ISM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	5605	1363	5605	-1363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATCTGAGGAATGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	7674259	7697536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ENSMUSG00000015757.11_7677711_7697880_1	chr10	+	1612	6	ISM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	9056	1019	9056	-1019	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTACTGGGGAGACAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	7677710	7697880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ENSMUSG00000015757.11_7683070_7698033_1	chr10	+	1640	4	ISM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	14415	866	14415	-866	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTGTTGCTCACACAGA	NA	NA	NA	NA	NA	NA	NA	NA	7683069	7698033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_7683147_7686125_7686223_7690427_7690576_7696715
ENSMUSG00000015757.11_7690525_7698292_1	chr10	+	1628	2	ISM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	21870	607	21870	-607	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATTCTGGAACAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	7690524	7698292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_7690576_7696715
ENSMUSG00000015759.12_47013520_47025682_1	chr14	-	856	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	186	496	51	79	multi-exon	FALSE	canonical	NA	NA	NA	NA	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTCACTTATCACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	47025682	47013519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
ENSMUSG00000015759.12_47013520_47025791_1	chr14	-	965	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	77	496	0	79	multi-exon	FALSE	canonical	NA	NA	NA	NA	2926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTCACTTATCACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	47025791	47013519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
ENSMUSG00000015759.12_47013744_47017719_1	chr14	-	557	3	ISM	ENSMUSG00000015759.12	ENSMUST00000146629.3	789	6	8072	0	8014	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCTCTGGTGTTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	47017719	47013743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47014007_47016345_47016490_47017569
ENSMUSG00000015766.15_137454666_137486260_1	chr6	-	2564	8	ISM	ENSMUSG00000015766.15	ENSMUST00000100841.9	4151	21	61755	0	28432	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1887	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTTTGCTTGGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	137486260	137454665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079
ENSMUSG00000015766.15_137454666_137486262_1	chr6	-	2378	9	ISM	ENSMUSG00000015766.15	ENST00000644374.1	3541	20	28430	-26	28430	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3817	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTTTGCTTGGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	137486262	137454665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137455632_137455819_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079
ENSMUSG00000015766.15_137454823_137489197_1	chr6	-	2270	10	ISM	ENSMUSG00000015766.15	ENST00000647224.1	3466	20	25495	56	25495	-56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAATGTTGTATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	137489197	137454822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137455632_137455819_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146
ENSMUSG00000015766.15_137454836_137489208_1	chr6	-	2456	9	ISM	ENSMUSG00000015766.15	ENSMUST00000100841.9	4151	21	58807	170	25484	49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1533	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGATGTTATGTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	137489208	137454835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146
ENSMUSG00000015766.15_137454871_137489250_1	chr6	-	2275	10	ISM	ENSMUSG00000015766.15	ENST00000647224.1	3466	20	25442	104	25442	14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3550	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCATGAAACGTAATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	137489250	137454870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137455632_137455819_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146
ENSMUSG00000015766.15_137454955_137491340_1	chr6	-	2489	10	ISM	ENSMUSG00000015766.15	ENSMUST00000100841.9	4151	21	56675	289	23352	-38	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1720	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAACCCCATGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	137491340	137454954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275
ENSMUSG00000015766.15_137455055_137491777_1	chr6	-	2288	12	ISM	ENSMUSG00000015766.15	ENST00000647224.1	3466	20	22915	288	22915	120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3519	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGCCTCAGTTATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	137491777	137455054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137455632_137455819_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700
ENSMUSG00000015766.15_137455333_137456081_1	chr6	-	561	2	ISM	ENSMUSG00000015766.15	ENST00000646123.1	3340	21	58611	416	58611	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCCAACAGTTTTAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	137456081	137455332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137455632_137455819
ENSMUSG00000015766.15_137455356_137499262_1	chr6	-	2500	14	ISM	ENSMUSG00000015766.15	ENSMUST00000100841.9	4151	21	48753	690	15430	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2851	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGCTTTATTTAAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	137499262	137455355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150
ENSMUSG00000015766.15_137455464_137459230_1	chr6	-	557	3	ISM	ENSMUSG00000015766.15	ENST00000646123.1	3340	21	55462	547	55462	-289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAAGTCTCAGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	137459230	137455463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137455632_137455819_137456128_137459149
ENSMUSG00000015766.15_137455953_137504511_1	chr6	-	2307	17	ISM	ENSMUSG00000015766.15	ENST00000647224.1	3466	20	10181	1186	10181	-778	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3926	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCCTTGAAGGGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	137504511	137455952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365
ENSMUSG00000015766.15_137459202_137476667_1	chr6	-	594	5	ISM	ENSMUSG00000015766.15	ENST00000646123.1	3340	21	38025	4285	38025	-4027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGTGCCAGAGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	137476667	137459201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137459280_137460539_137460721_137467214_137467438_137470545_137470570_137476579
ENSMUSG00000015766.15_137467214_137482521_1	chr6	-	637	5	ISM	ENSMUSG00000015766.15	ENST00000646123.1	3340	21	32171	12297	32171	-12039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTCCCCGGGGGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	137482521	137467213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137467438_137470545_137470570_137476579_137476724_137477532_137477642_137482385
ENSMUSG00000015766.15_137467317_137486122_1	chr6	-	575	6	ISM	ENSMUSG00000015766.15	ENST00000646123.1	3340	21	28570	12400	28570	-12142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGTCCCAGCCAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	137486122	137467316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137467438_137470545_137470570_137476579_137476724_137477532_137477642_137482385_137482520_137486079
ENSMUSG00000015766.15_137467372_137486177_1	chr6	-	575	6	ISM	ENSMUSG00000015766.15	ENST00000646123.1	3340	21	28515	12455	28515	-12197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCACCCGTTCCGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	137486177	137467371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137467438_137470545_137470570_137476579_137476724_137477532_137477642_137482385_137482520_137486079
ENSMUSG00000015766.15_137489147_137505598_1	chr6	-	1122	10	ISM	ENSMUSG00000015766.15	ENST00000646123.1	3340	21	9094	34230	9094	-33972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCACTGTAGAGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	137505598	137489146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522
ENSMUSG00000015766.15_137504085_137516357_1	chr6	-	496	5	ISM	ENSMUSG00000015766.15	ENST00000642278.1	3480	21	94	49200	94	-48910	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTGCCTCAGCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	137516357	137504084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319
ENSMUSG00000015766.15_137504147_137516399_1	chr6	-	476	5	ISM	ENSMUSG00000015766.15	ENST00000642278.1	3480	21	52	49262	52	-48972	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCAAAGAGCCAACGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	137516399	137504146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319
ENSMUSG00000015790.17_26803393_26806409_1	chr2	-	1042	9	FSM	ENSMUSG00000015790.17	ENSMUST00000015934.13	1173	9	133	-2	133	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTCAGTCTGAAACCGT	NA	NA	NA	NA	NA	NA	NA	NA	26806409	26803392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
ENSMUSG00000015804.15_45677637_45684506_1	chr5	+	2382	4	FSM	ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	66	2112	0	1527	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGGGGAGGGGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	45677636	45684506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_45677827_45679777_45679845_45680763_45680877_45682494
ENSMUSG00000015804.15_45679776_45684673_1	chr5	+	2361	3	ISM	ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	2205	1945	2131	1694	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTGCCTCTCTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	45679775	45684673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_45679845_45680763_45680877_45682494
ENSMUSG00000015804.15_45679776_45684786_1	chr5	+	2474	3	ISM	ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	2205	1832	2131	1807	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACCATCCCCCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	45679775	45684786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_45679845_45680763_45680877_45682494
ENSMUSG00000015804.15_45680763_45684786_1	chr5	+	2406	2	ISM	ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	3192	1832	3118	1807	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACCATCCCCCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	45680762	45684786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_45680877_45682494
ENSMUSG00000015806.13_45591395_45607463_1	chr5	-	1265	7	FSM	ENSMUSG00000015806.13	ENSMUST00000015950.12	1380	7	115	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	45607463	45591394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
ENSMUSG00000015806.13_45591731_45607463_1	chr5	-	836	6	FSM	ENSMUSG00000015806.13	ENST00000428702.6	776	6	-5	-55	0	55	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTAGGTAGCACCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	45607463	45591730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45607348
ENSMUSG00000015837.16_50090193_50093781_1	chr11	-	1805	3	ISM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	7837	0	7811	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATTGAGTGAGCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	50093781	50090192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50091775_50093339_50093422_50093640
ENSMUSG00000015837.16_50090410_50098026_1	chr11	-	1789	5	ISM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	3592	217	3566	-217	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGCTGGTGCCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	50098026	50090409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50091775_50093339_50093422_50093640_50093862_50096849_50096931_50097986
ENSMUSG00000015837.16_50090477_50098146_1	chr11	-	1842	5	ISM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	3472	284	3446	-284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACAGGACTTGGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	50098146	50090476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50091775_50093339_50093422_50093640_50093862_50096849_50096931_50097986
ENSMUSG00000015837.16_50090621_50098308_1	chr11	-	1755	6	ISM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	3310	428	3284	358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTCTTGTTCTCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	50098308	50090620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50091775_50093339_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233
ENSMUSG00000015837.16_50090675_50098358_1	chr11	-	1751	6	ISM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	3260	482	3234	304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGGCTTGAGGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	50098358	50090674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50091775_50093339_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233
ENSMUSG00000015837.16_50090730_50098406_1	chr11	-	1744	6	ISM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	3212	537	3186	249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGCTGCTCTCGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	50098406	50090729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50091775_50093339_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233
ENSMUSG00000015837.16_50090840_50098712_1	chr11	-	1756	7	ISM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	2906	647	2880	139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATCATCAAAGTCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	50098712	50090839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50091775_50093339_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647
ENSMUSG00000015837.16_50090979_50093423_1	chr11	-	994	2	ISM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	8231	0	8169	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTGATCCGTACGAGT	NA	NA	NA	NA	NA	NA	NA	NA	50093423	50090978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50091775_50093225
ENSMUSG00000015837.16_50090994_50093423_1	chr11	-	979	2	ISM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	8231	15	8169	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCACTTTAACCAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	50093423	50090993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50091775_50093225
ENSMUSG00000015837.16_50090994_50101592_1	chr11	-	1846	8	FSM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	26	801	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	3086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCACTTTAACCAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	50101592	50090993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_50091775_50093339_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ENSMUSG00000015837.16_50091214_50093791_1	chr11	-	908	3	ISM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	7863	235	7801	224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGACTGTCCATAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	50093791	50091213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50091775_50093225_50093422_50093640
ENSMUSG00000015837.16_50091438_50098146_1	chr11	-	995	5	ISM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	3508	459	3446	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCTGAGAACAGACCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	50098146	50091437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50091775_50093225_50093422_50093640_50093862_50096849_50096931_50097986
ENSMUSG00000015837.16_50091661_50098357_1	chr11	-	878	6	ISM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	3297	682	3235	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGACACGATCCAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	50098357	50091660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50091775_50093225_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233
ENSMUSG00000015837.16_50093270_50101396_1	chr11	-	939	7	ISM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	258	2291	196	-1832	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGGGCTGAAGGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	50101396	50093269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ENSMUSG00000015837.16_50093270_50101455_1	chr11	-	998	7	ISM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	199	2291	137	-1832	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGGGCTGAAGGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	50101455	50093269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ENSMUSG00000015837.16_50093402_50101592_1	chr11	-	1003	7	ISM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	62	2423	0	-1964	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTCAGGAGGAGACGATG	NA	NA	NA	NA	NA	NA	NA	NA	50101592	50093401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ENSMUSG00000015839.7_75507352_75509534_1	chr2	-	463	4	ISM	ENSMUSG00000015839.7	ENST00000446151.6	2360	5	24326	1488	24326	-1488	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCTCCACTGATGATGC	NA	NA	NA	NA	NA	NA	NA	NA	75509534	75507351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506
ENSMUSG00000015839.7_75507427_75509610_1	chr2	-	464	4	ISM	ENSMUSG00000015839.7	ENST00000446151.6	2360	5	24250	1563	24250	-1563	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCCTCGCTGGAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	75509610	75507426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506
ENSMUSG00000015839.7_75507948_75509691_1	chr2	-	384	3	ISM	ENSMUSG00000015839.7	ENST00000446151.6	2360	5	24169	2084	24169	-2084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGAGCAGGACATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	75509691	75507947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_75508057_75508831_75508922_75509506
ENSMUSG00000015839.7_75508004_75533737_1	chr2	-	457	4	ISM	ENSMUSG00000015839.7	ENST00000446151.6	2360	5	123	2140	123	-2140	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCAGGCCCAGTCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	75533737	75508003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_75508057_75508831_75508922_75509506_75509774_75533690
ENSMUSG00000015850.12_95584255_95585169_1	chr3	-	402	4	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	6811	234	6811	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCCCCCTGGTGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	95585169	95584254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95584280_95584420_95584566_95584837_95585018_95585117
ENSMUSG00000015850.12_95584888_95586994_1	chr3	-	425	3	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	4986	867	4986	-867	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGGGCAGGCCTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	95586994	95584887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95585018_95585117_95585316_95586897
ENSMUSG00000015850.12_95585163_95587406_1	chr3	-	436	3	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	4574	1142	4574	-1142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGAGAGGACATGGCG	NA	NA	NA	NA	NA	NA	NA	NA	95587406	95585162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95585316_95586897_95587075_95587300
ENSMUSG00000015850.12_95585231_95587459_1	chr3	-	421	3	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	4521	1210	4521	-1210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAGCACTGAGCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	95587459	95585230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95585316_95586897_95587075_95587300
ENSMUSG00000015850.12_95585291_95587505_1	chr3	-	407	3	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	4475	1270	4475	-1270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGAGACGCGCTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	95587505	95585290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95585316_95586897_95587075_95587300
ENSMUSG00000015850.12_95586898_95587784_1	chr3	-	412	3	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	4196	2877	4196	-2877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTCCTATACTTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	95587784	95586897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95587075_95587300_95587506_95587754
ENSMUSG00000015850.12_95587022_95588065_1	chr3	-	407	4	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	3915	3001	3915	-3001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAATGGTGATGAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	95588065	95587021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95587075_95587300_95587506_95587754_95587885_95588046
ENSMUSG00000015850.12_95587301_95588445_1	chr3	-	447	4	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	3535	3280	3535	-3280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGAGGACCCTTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	95588445	95587300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95587506_95587754_95587885_95588046_95588121_95588407
ENSMUSG00000015850.12_95587765_95589004_1	chr3	-	448	5	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	2976	3744	2976	-3744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTCCATAGTGAGTACGG	NA	NA	NA	NA	NA	NA	NA	NA	95589004	95587764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95587885_95588046_95588121_95588407_95588446_95588569_95588743_95588961
ENSMUSG00000015850.12_95587837_95589043_1	chr3	-	415	5	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	2937	3816	2937	-3816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGGATGAACAGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	95589043	95587836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95587885_95588046_95588121_95588407_95588446_95588569_95588743_95588961
ENSMUSG00000015850.12_95589121_95591009_1	chr3	-	421	4	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	971	5100	971	-5100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGAGTCTGCGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	95591009	95589120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95589167_95589519_95589657_95590549_95590721_95590942
ENSMUSG00000015850.12_95589611_95591139_1	chr3	-	414	3	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	841	5590	841	-5590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGATTCTATGTCCGACACA	NA	NA	NA	NA	NA	NA	NA	NA	95591139	95589610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95589657_95590549_95590721_95590942
ENSMUSG00000015850.12_95590638_95591276_1	chr3	-	417	2	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	704	6617	704	-6617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGAGCCCTTCACCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	95591276	95590637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95590721_95590942
ENSMUSG00000015850.12_95590681_95591342_1	chr3	-	440	2	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	638	6660	638	-6660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCGCCTTTGACTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	95591342	95590680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95590721_95590942
ENSMUSG00000015850.12_95591234_95591780_1	chr3	-	426	2	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	200	7213	200	-7213	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAGACAGTAGGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	95591780	95591233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95591550_95591670
ENSMUSG00000015850.12_95591296_95591823_1	chr3	-	407	2	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	157	7275	157	-7275	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCTCCCCAGAACTAGT	NA	NA	NA	NA	NA	NA	NA	NA	95591823	95591295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95591550_95591670
ENSMUSG00000015850.12_95591351_95591878_1	chr3	-	407	2	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	102	7330	102	-7330	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAACCCCGTTCTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	95591878	95591350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95591550_95591670
ENSMUSG00000015869.17_116361671_116381115_1	chr11	-	1782	10	FSM	ENSMUSG00000015869.17	ENSMUST00000106391.8	1841	10	59	0	59	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCTGCTGAGCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	116381115	116361670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ENSMUSG00000015869.17_116361671_116381115_2	chr11	-	1775	10	NNC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCTGCTGAGCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	116381115	116361670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368167_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ENSMUSG00000015869.17_116361671_116381115_3	chr11	-	1775	10	NNC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCTGCTGAGCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	116381115	116361670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376755_116378943_116378997_116380873
ENSMUSG00000015880.14_45827457_45829756_1	chr5	+	365	3	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	196	28132	196	-28132	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGATTCCAAATGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	45827456	45829756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_45827476_45828361_45828566_45829614
ENSMUSG00000015880.14_45829722_45833316_1	chr5	+	379	4	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	2461	24572	2461	-24572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTCTCCAAGGCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	45829721	45833316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_45829844_45831699_45831846_45832110_45832196_45833290
ENSMUSG00000015880.14_45829798_45833354_1	chr5	+	341	4	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	2537	24534	2537	-24534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTAGAGTTTCTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	45829797	45833354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_45829844_45831699_45831846_45832110_45832196_45833290
ENSMUSG00000015880.14_45835694_45839098_1	chr5	+	374	4	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	8433	18790	8433	-18790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAAAGAAGCTTTGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	45835693	45839098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_45835830_45837189_45837314_45838713_45838798_45839068
ENSMUSG00000015880.14_45835755_45839151_1	chr5	+	366	4	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	8494	18737	8494	-18737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAAAAGAAGAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	45835754	45839151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_45835830_45837189_45837314_45838713_45838798_45839068
ENSMUSG00000015880.14_45835816_45839207_1	chr5	+	361	4	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	8555	18681	8555	-18681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTGAGCAACTTGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	45835815	45839207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_45835830_45837189_45837314_45838713_45838798_45839068
ENSMUSG00000015880.14_45837264_45844706_1	chr5	+	367	4	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	10003	13182	10003	-13182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATGTCCACTTCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	45837263	45844706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_45837314_45838713_45838798_45839068_45839249_45844653
ENSMUSG00000015880.14_45845949_45850564_1	chr5	+	365	3	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	18688	7324	18688	-7324	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCAGGATTCTTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	45845948	45850564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_45846023_45848943_45849169_45850498
ENSMUSG00000015880.14_45849055_45851179_1	chr5	+	382	3	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	21794	6709	21794	-6709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTCACAAATGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	45849054	45851179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_45849169_45850498_45850681_45851093
ENSMUSG00000015880.14_45853416_45857308_1	chr5	+	356	4	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	26155	580	26155	-580	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATAAGGATGAAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	45853415	45857308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_45853511_45853814_45853887_45856182_45856253_45857189
ENSMUSG00000015889.9_93289273_93310371_1	chr10	+	1330	12	NNC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	0	-10314	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTTTCCTACCAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	93289272	93310371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305068_93307157_93307229_93307715_93307828_93308760_93308906_93310337
ENSMUSG00000015889.9_93289273_93310371_2	chr10	+	1337	13	ISM	ENSMUSG00000015889.9	ENSMUST00000016033.9	2029	19	0	10365	0	-10314	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTTTCCTACCAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	93289272	93310371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337
ENSMUSG00000015889.9_93289493_93314341_1	chr10	+	1284	14	NNC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	220	-6344	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1087	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAGTCAAAGATGGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	93289492	93314341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305068_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308
ENSMUSG00000015889.9_93289505_93314337_1	chr10	+	1275	15	ISM	ENSMUSG00000015889.9	ENSMUST00000016033.9	2029	19	232	6399	232	-6348	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCTTAAGTCAAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	93289504	93314337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308
ENSMUSG00000015889.9_93295678_93316649_1	chr10	+	1366	14	NNC	ENSMUSG00000015889.9	novel	1635	17	NA	NA	-3	-4036	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCCAGCTCCCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	93295677	93316649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305068_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552
ENSMUSG00000015889.9_93297168_93304690_1	chr10	+	425	5	ISM	ENSMUSG00000015889.9	ENST00000413268.6	1635	17	1487	15995	1487	-15995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTCAGACATACCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	93297167	93304690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617
ENSMUSG00000015889.9_93297255_93318928_1	chr10	+	1345	16	ISM	ENSMUSG00000015889.9	ENSMUST00000016033.9	2029	19	7982	1808	1574	-1757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCCACATCAGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	93297254	93318928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823
ENSMUSG00000015889.9_93297255_93318929_1	chr10	+	1339	15	NNC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	1574	-1756	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCCACATCAGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	93297254	93318929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305068_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823
ENSMUSG00000015889.9_93301850_93320680_1	chr10	+	1355	15	ISM	ENSMUSG00000015889.9	ENSMUST00000016033.9	2029	19	12577	56	6169	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2031	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	93301849	93320680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ENSMUSG00000015889.9_93301853_93320680_1	chr10	+	1345	14	NNC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	6172	-5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	93301852	93320680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_93301916_93302973_93303027_93304617_93304691_93304909_93305068_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ENSMUSG00000015889.9_93307715_93310850_1	chr10	+	433	4	ISM	ENSMUSG00000015889.9	ENST00000413268.6	1635	17	12034	9835	12034	-9835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTACCCGCCTGCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	93307714	93310850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93307828_93308760_93308906_93310337_93310442_93310779
ENSMUSG00000015889.9_93308866_93318869_1	chr10	+	412	6	ISM	ENSMUSG00000015889.9	ENST00000413268.6	1635	17	13185	1816	13185	-1816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCCCTAAAGATGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	93308865	93318869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318823
ENSMUSG00000015889.9_93310336_93318929_1	chr10	+	434	5	ISM	ENSMUSG00000015889.9	ENST00000413268.6	1635	17	14655	1756	14655	-1756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCCACATCAGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	93310335	93318929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318823
ENSMUSG00000015889.9_93316553_93320680_1	chr10	+	357	3	ISM	ENSMUSG00000015889.9	ENST00000413268.6	1635	17	20872	5	20872	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	93316552	93320680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93316649_93318823_93318929_93320524
ENSMUSG00000015932.9_143757384_143780399_1	chr2	+	279	2	ISM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	144	4845	144	-4845	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGCTGTCATTTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	143757383	143780399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143757568_143780304
ENSMUSG00000015932.9_143757411_143780474_1	chr2	+	327	2	ISM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	171	4770	171	-4770	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTGGCGCCACCATAA	NA	NA	NA	NA	NA	NA	NA	NA	143757410	143780474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143757568_143780304
ENSMUSG00000015932.9_143757486_143780500_1	chr2	+	278	2	ISM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	246	4744	246	-4744	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAAGCATTTTGTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	143757485	143780500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143757568_143780304
ENSMUSG00000015932.9_143780502_143784190_1	chr2	+	332	3	ISM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	23262	1054	23262	-1054	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	855	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGAACACTATCCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	143780501	143784190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143780613_143781871_143781949_143784046
ENSMUSG00000015937.16_56221799_56231022_1	chr13	-	497	2	ISM	ENSMUSG00000015937.16	ENST00000423969.6	695	4	45243	-153	45243	153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTCTGACTTAGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	56231022	56221798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_56222206_56230932
ENSMUSG00000015937.16_56221842_56231085_1	chr13	-	517	2	ISM	ENSMUSG00000015937.16	ENST00000423969.6	695	4	45180	-110	45180	110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATAGCCGGCATCGTC	NA	NA	NA	NA	NA	NA	NA	NA	56231085	56221841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_56222206_56230932
ENSMUSG00000015937.16_56221979_56276202_1	chr13	-	605	4	FSM	ENSMUSG00000015937.16	ENST00000423969.6	695	4	63	27	63	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAGAGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	56276202	56221978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_56222206_56230932_56231108_56232008_56232099_56276089
ENSMUSG00000015937.16_56230980_56252195_1	chr13	-	501	5	ISM	ENSMUSG00000015937.16	ENSMUST00000045788.9	1933	9	31148	9545	24070	-9028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAAAGCTGAAATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	56252195	56230979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_56231108_56232008_56232099_56236064_56236156_56243936_56244048_56252114
ENSMUSG00000015937.16_56232046_56252760_1	chr13	-	512	5	ISM	ENSMUSG00000015937.16	ENSMUST00000045788.9	1933	9	30583	10611	23505	-10094	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCGGAAAAAGAACGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	56252760	56232045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_56232099_56236064_56236156_56243936_56244048_56252114_56252313_56252701
ENSMUSG00000015937.16_56236125_56276145_1	chr13	-	503	5	ISM	ENSMUSG00000015937.16	ENSMUST00000045788.9	1933	9	7198	14690	120	-14173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGACAGTGATGCTGTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	56276145	56236124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_56236156_56243936_56244048_56252114_56252313_56252701_56252809_56276089
ENSMUSG00000015937.16_56244013_56276254_1	chr13	-	505	4	ISM	ENSMUSG00000015937.16	ENSMUST00000045788.9	1933	9	7089	22578	11	-22061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGTACGACGGAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	56276254	56244012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_56244048_56252114_56252313_56252701_56252809_56276089
ENSMUSG00000015961.9_177590742_177597588_1	chr1	-	1370	3	ISM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	26489	214	26341	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTGTGTTGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	177597588	177590741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_177591864_177595220_177595371_177597490
ENSMUSG00000015961.9_177590856_177598758_1	chr1	-	1308	4	ISM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	25319	328	25171	-328	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGCTGAGATTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	177598758	177590855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706
ENSMUSG00000015961.9_177590990_177599665_1	chr1	-	1275	5	ISM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	24412	462	24264	-462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGCCTGCCAGTATACCTA	NA	NA	NA	NA	NA	NA	NA	NA	177599665	177590989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637
ENSMUSG00000015961.9_177591038_177599721_1	chr1	-	1283	5	ISM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	24356	510	24208	-510	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTAAGCATACTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	177599721	177591037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637
ENSMUSG00000015961.9_177591239_177603167_1	chr1	-	1301	7	ISM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	20910	711	20762	576	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAACACAGAACTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	177603167	177591238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146
ENSMUSG00000015961.9_177591362_177604041_1	chr1	-	1258	8	ISM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	20036	834	19888	453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTGTAAAGCTAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	177604041	177591361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022
ENSMUSG00000015961.9_177591554_177611628_1	chr1	-	1287	11	ISM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	12449	1026	12301	261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTGACATCTAGAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	177611628	177591553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614
ENSMUSG00000015961.9_177591629_177611667_1	chr1	-	1251	11	ISM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	12410	1101	12262	186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGCCACATCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	177611667	177591628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614
ENSMUSG00000015961.9_177591815_177623845_1	chr1	-	1252	13	FSM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	232	1287	84	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGGATTGCCAGCAACGC	NA	NA	NA	NA	NA	NA	NA	NA	177623845	177591814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ENSMUSG00000015961.9_177591815_177623845_2	chr1	-	970	11	FSM	ENSMUSG00000015961.9	ENST00000588022.1	1054	11	84	0	84	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGGATTGCCAGCAACGC	NA	NA	NA	NA	NA	NA	NA	NA	177623845	177591814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ENSMUSG00000015961.9_177591815_177623845_3	chr1	-	969	11	NNC	ENSMUSG00000015961.9	novel	1054	11	NA	NA	84	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGGATTGCCAGCAACGC	NA	NA	NA	NA	NA	NA	NA	NA	177623845	177591814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177603146_177603229_177604022_177604131_177604379_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ENSMUSG00000015961.9_177597491_177624067_1	chr1	-	1275	11	ISM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	10	6963	10	-5676	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTCTTTTGTTTTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	177624067	177597490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ENSMUSG00000015971.6_29700517_29708372_1	chr14	+	555	5	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	223	6804	142	-6804	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTATTTGGAAATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	29700516	29708372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233
ENSMUSG00000015971.6_29704626_29708957_1	chr14	+	570	5	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	4332	6219	4251	-6219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGCTTCGCAGGTACG	NA	NA	NA	NA	NA	NA	NA	NA	29704625	29708957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878
ENSMUSG00000015971.6_29706033_29709263_1	chr14	+	526	5	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	5739	5913	5658	-5913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTGCTGTGTAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	29706032	29709263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175
ENSMUSG00000015971.6_29707953_29710223_1	chr14	+	514	5	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	7659	4953	7578	-4953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTGTCAGCTGACAAATA	NA	NA	NA	NA	NA	NA	NA	NA	29707952	29710223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145
ENSMUSG00000015971.6_29708270_29710923_1	chr14	+	533	5	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	7976	4253	7895	-4253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACCATGAGTTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	29708269	29710923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909
ENSMUSG00000015971.6_29708314_29710992_1	chr14	+	558	5	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	8020	4184	7939	-4184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGCTCCAGGTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	29708313	29710992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909
ENSMUSG00000015971.6_29709180_29712686_1	chr14	+	546	5	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	8886	2490	8805	-2490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCATCCAAACCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	29709179	29712686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660
ENSMUSG00000015971.6_29709250_29712729_1	chr14	+	519	5	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	8956	2447	8875	-2447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCCTCTGATCTTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	29709249	29712729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660
ENSMUSG00000015971.6_29710164_29712868_1	chr14	+	581	4	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	9870	2308	9789	-2308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGGGAAAGCCTTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	29710163	29712868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_29710300_29710909_29711006_29711616_29711758_29712660
ENSMUSG00000015971.6_29710246_29712893_1	chr14	+	524	4	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	9952	2283	9871	-2283	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCCATCCTGCACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	29710245	29712893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_29710300_29710909_29711006_29711616_29711758_29712660
ENSMUSG00000015971.6_29710910_29713601_1	chr14	+	555	4	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	10616	1575	10535	-1575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGATGTTTCATAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	29710909	29713601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_29711006_29711616_29711758_29712660_29712926_29713548
ENSMUSG00000015971.6_29711672_29714944_1	chr14	+	542	4	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	11378	232	11297	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAGGTGCAGTACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	29711671	29714944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_29711758_29712660_29712926_29713548_29713713_29714917
ENSMUSG00000015971.6_29712714_29715062_1	chr14	+	521	3	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	12420	114	12339	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACAACCGAGTCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	29712713	29715062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_29712926_29713548_29713713_29714917
ENSMUSG00000015971.6_29712782_29715176_1	chr14	+	567	3	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	12488	0	12407	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACACTGATTTGAGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	29712781	29715176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_29712926_29713548_29713713_29714917
ENSMUSG00000015994.11_26489148_26491060_1	chr8	-	680	3	ISM	ENSMUSG00000015994.11	ENST00000430308.1	614	5	14542	-346	14542	346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGATTTGCAGTAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	26491060	26489147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26489593_26489796_26489969_26490997
ENSMUSG00000015994.11_26489561_26499731_1	chr8	-	582	6	ISM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	5947	811	5871	-67	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAGAAAGGAATATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	26499731	26489560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26489593_26489796_26489969_26490997_26491061_26494443_26494593_26497214_26497342_26499692
ENSMUSG00000015994.11_26489946_26501275_1	chr8	-	620	6	NNC	ENSMUSG00000015994.11	novel	1930	9	NA	NA	4327	-452	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGATACCCTAATCTATTA	NA	NA	NA	NA	NA	NA	NA	NA	26501275	26489945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_26489969_26490997_26491061_26494448_26494593_26497214_26497342_26499692_26499798_26501117
ENSMUSG00000015994.11_26490997_26503583_1	chr8	-	646	6	ISM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	2095	2247	2019	-1503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCACTGCTCCCCCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	26503583	26490996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26491061_26494443_26494593_26497214_26497342_26499692_26499798_26501117_26501233_26503497
ENSMUSG00000015994.11_26494477_26505432_1	chr8	-	573	6	ISM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	246	5727	170	-4983	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGACCGCGCGGTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	26505432	26494476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26494593_26497214_26497342_26499692_26499798_26501117_26501233_26503497_26503584_26505408
ENSMUSG00000015994.11_26494524_26505489_1	chr8	-	583	6	ISM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	189	5774	113	-5030	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTGTGGAACCAAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	26505489	26494523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26494593_26497214_26497342_26499692_26499798_26501117_26501233_26503497_26503584_26505408
ENSMUSG00000015994.11_26494569_26505546_1	chr8	-	595	6	ISM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	132	5819	56	-5075	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGTATGTAGACCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	26505546	26494568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26494593_26497214_26497342_26499692_26499798_26501117_26501233_26503497_26503584_26505408
ENSMUSG00000016018.5_113004389_113009553_1	chr13	-	367	3	ISM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	54379	437	54379	-437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAACATCATTCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	113009553	113004388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_113004530_113005544_113005650_113009432
ENSMUSG00000016018.5_113028466_113035410_1	chr13	-	392	3	ISM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	28522	24514	28522	-24514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTACTGCTTACCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	113035410	113028465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_113028595_113032006_113032158_113035298
ENSMUSG00000016018.5_113032089_113040012_1	chr13	-	377	4	ISM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	23920	28137	23920	-28137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAATTAACCCCGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	113040012	113032088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_113032158_113035298_113035425_113038006_113038109_113039932
ENSMUSG00000016018.5_113045435_113049685_1	chr13	-	373	4	ISM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	14247	41483	14247	-41483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGGTAATTCGGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	113049685	113045434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_113045532_113046349_113046449_113047443_113047569_113049633
ENSMUSG00000016179.12_193028654_193030483_1	chr1	-	1107	3	ISM	ENSMUSG00000016179.12	ENST00000009105.5	2349	12	13948	-1	13948	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTTTTGCTCATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	193030483	193028653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_193029526_193029639_193029756_193030364
ENSMUSG00000016179.12_193028847_193030606_1	chr1	-	1037	3	ISM	ENSMUSG00000016179.12	ENST00000009105.5	2349	12	13825	192	13825	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCCACACACCTCATATA	NA	NA	NA	NA	NA	NA	NA	NA	193030606	193028846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_193029526_193029639_193029756_193030364
ENSMUSG00000016179.12_193029275_193034689_1	chr1	-	1089	7	ISM	ENSMUSG00000016179.12	ENST00000009105.5	2349	12	9742	620	9742	-620	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATTCCCTTCCCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	193034689	193029274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_193029526_193029639_193029756_193030364_193030793_193031026_193031115_193032582_193032662_193033297_193033411_193034675
ENSMUSG00000016179.12_193029383_193036330_1	chr1	-	1074	8	ISM	ENSMUSG00000016179.12	ENST00000009105.5	2349	12	8101	728	8101	-728	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGAAGTCCAGAGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	193036330	193029382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_193029526_193029639_193029756_193030364_193030793_193031026_193031115_193032582_193032662_193033297_193033411_193034675_193034752_193036299
ENSMUSG00000016179.12_193029461_193036378_1	chr1	-	1044	8	ISM	ENSMUSG00000016179.12	ENST00000009105.5	2349	12	8053	806	8053	-806	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGGGGCAGTGGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	193036378	193029460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_193029526_193029639_193029756_193030364_193030793_193031026_193031115_193032582_193032662_193033297_193033411_193034675_193034752_193036299
ENSMUSG00000016179.12_193029688_193037333_1	chr1	-	1046	8	ISM	ENSMUSG00000016179.12	ENST00000009105.5	2349	12	7098	1033	7098	-1033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTGTGTCTCGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	193037333	193029687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_193029756_193030364_193030793_193031026_193031115_193032582_193032662_193033297_193033411_193034675_193034752_193036299_193036424_193037263
ENSMUSG00000016179.12_193030530_193042110_1	chr1	-	1041	9	ISM	ENSMUSG00000016179.12	ENST00000009105.5	2349	12	2321	1875	2321	-1875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAACGGCTCCCTGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	193042110	193030529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_193030793_193031026_193031115_193032582_193032662_193033297_193033411_193034675_193034752_193036299_193036424_193037263_193037403_193038624_193038700_193042026
ENSMUSG00000016179.12_193030634_193044390_1	chr1	-	1052	10	ISM	ENSMUSG00000016179.12	ENST00000009105.5	2349	12	41	1979	41	-1979	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATCCTGGACCCAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	193044390	193030633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_193030793_193031026_193031115_193032582_193032662_193033297_193033411_193034675_193034752_193036299_193036424_193037263_193037403_193038624_193038700_193042026_193042156_193044320
ENSMUSG00000016179.12_193036300_193052533_1	chr1	-	639	6	ISM	ENSMUSG00000016179.12	ENSMUST00000169907.8	1968	12	0	7646	0	-7645	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCAGGGGCAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	193052533	193036299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_193036424_193037263_193037403_193038624_193038700_193042026_193042156_193044320_193044442_193052482
ENSMUSG00000016194.15_192904308_192922942_1	chr1	-	661	4	NNC	ENSMUSG00000016194.15	novel	940	6	NA	NA	964	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTGAGTGGTCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	192922942	192904307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_192904531_192905929_192906074_192922538_192922725_192922834
ENSMUSG00000016194.15_192904308_192922946_1	chr1	-	671	4	ISM	ENSMUSG00000016194.15	ENSMUST00000160929.8	1256	5	960	318	960	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTGAGTGGTCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	192922946	192904307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_192904537_192905929_192906074_192922538_192922725_192922834
ENSMUSG00000016194.15_192904413_192923732_1	chr1	-	653	5	NNC	ENSMUSG00000016194.15	novel	940	6	NA	NA	174	-105	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTCCAATCCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	192923732	192904412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_192904531_192905929_192906074_192922538_192922725_192922834_192922943_192923635
ENSMUSG00000016194.15_192904413_192923732_2	chr1	-	659	5	FSM	ENSMUSG00000016194.15	ENSMUST00000160929.8	1256	5	174	423	174	-105	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTCCAATCCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	192923732	192904412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_192904537_192905929_192906074_192922538_192922725_192922834_192922947_192923639
ENSMUSG00000016194.15_192904515_192924517_1	chr1	-	630	6	FSM	ENSMUSG00000016194.15	ENSMUST00000016338.15	1623	6	420	573	103	-207	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGATAATTAACGCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	192924517	192904514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_192904537_192905929_192906074_192922538_192922725_192922834_192922947_192923639_192923771_192924482
ENSMUSG00000016194.15_192905949_192924572_1	chr1	-	650	5	NNC	ENSMUSG00000016194.15	novel	1623	6	NA	NA	48	-1641	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCCTCATAGACACAGG	NA	NA	NA	NA	NA	NA	NA	NA	192924572	192905948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_192906074_192922538_192922725_192922834_192922947_192923633_192923771_192924482
ENSMUSG00000016194.15_192905949_192924620_1	chr1	-	692	5	ISM	ENSMUSG00000016194.15	ENSMUST00000016338.15	1623	6	317	2007	0	-1641	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCCTCATAGACACAGG	NA	NA	NA	NA	NA	NA	NA	NA	192924620	192905948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_192906074_192922538_192922725_192922834_192922947_192923639_192923771_192924482
ENSMUSG00000016200.15_192579681_192669181_1	chr1	-	594	3	ISM	ENSMUSG00000016200.15	ENST00000481459.2	715	4	40146	62	40146	-62	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACTGCAATGAAGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	192669181	192579680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_192579929_192584059_192584250_192669025
ENSMUSG00000016200.15_192579727_192709304_1	chr1	-	584	4	FSM	ENSMUSG00000016200.15	ENST00000481459.2	715	4	23	108	23	-108	multi-exon	FALSE	canonical	NA	NA	NA	NA	1654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTCCTTAGGTCTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	192709304	192579726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_192579929_192584059_192584250_192669025_192669191_192709277
ENSMUSG00000016206.7_37581451_37585161_1	chr17	+	1071	7	ISM	ENSMUSG00000016206.7	ENSMUST00000038580.7	1438	8	340	214	340	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCACCTGTACCACAG	NA	NA	NA	NA	NA	NA	NA	NA	37581450	37585161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_37581683_37581888_37582165_37583159_37583436_37583538_37583644_37584609_37584643_37584756_37584804_37585059
ENSMUSG00000016206.7_37581568_37585269_1	chr17	+	1062	7	ISM	ENSMUSG00000016206.7	ENSMUST00000038580.7	1438	8	457	106	457	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTATTATTATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	37581567	37585269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_37581683_37581888_37582165_37583159_37583436_37583538_37583644_37584609_37584643_37584756_37584804_37585059
ENSMUSG00000016206.7_37581633_37585375_1	chr17	+	1103	7	ISM	ENSMUSG00000016206.7	ENSMUST00000038580.7	1438	8	522	0	522	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACCCCATGTGTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	37581632	37585375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_37581683_37581888_37582165_37583159_37583436_37583538_37583644_37584609_37584643_37584756_37584804_37585059
ENSMUSG00000016239.12_35594339_35598939_1	chrX	+	361	3	ISM	ENSMUSG00000016239.12	ENST00000422289.3	2804	12	461	27211	461	-27055	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCCCTTGATGGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	35594338	35598939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_35594506_35596168_35596288_35598864
ENSMUSG00000016252.8_174302868_174304425_1	chr2	-	280	2	ISM	ENSMUSG00000016252.8	ENSMUST00000016396.8	421	3	1473	3	1397	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2981	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGGTTTTGTTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	174304425	174302867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_174303015_174304292
ENSMUSG00000016252.8_174302868_174304425_2	chr2	-	273	2	NNC	ENSMUSG00000016252.8	novel	421	3	NA	NA	1397	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2695	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGGTTTTGTTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	174304425	174302867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_174303015_174304299
ENSMUSG00000016253.13_174257644_174264990_1	chr2	+	699	6	ISM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	47	4305	0	-4305	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCAGTAAGTCCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	174257643	174264990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844
ENSMUSG00000016253.13_174257673_174265249_1	chr2	+	758	7	ISM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	76	4046	29	-4046	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGCGCAGGGTCGC	NA	NA	NA	NA	NA	NA	NA	NA	174257672	174265249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168
ENSMUSG00000016253.13_174261854_174265268_1	chr2	+	666	6	ISM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	4257	4027	4210	-4027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGAAGTCCAGCGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	174261853	174265268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168
ENSMUSG00000016253.13_174261918_174265820_1	chr2	+	678	7	ISM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	4321	3475	4274	-3475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTACCCCCGAGCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	174261917	174265820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775
ENSMUSG00000016253.13_174263541_174266465_1	chr2	+	697	6	ISM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	5944	2830	5897	-2830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGACCACAAACACAAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	174263540	174266465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398
ENSMUSG00000016253.13_174264421_174267005_1	chr2	+	731	6	ISM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	6824	2290	6777	-2290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGTGGCTGAGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	174264420	174267005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906
ENSMUSG00000016253.13_174264930_174267747_1	chr2	+	682	6	ISM	ENSMUSG00000016253.13	ENSMUST00000016397.7	2280	15	7286	1548	7286	-1548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGTATCGGAGCCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	174264929	174267747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705
ENSMUSG00000016253.13_174265185_174268182_1	chr2	+	744	6	ISM	ENSMUSG00000016253.13	ENSMUST00000016397.7	2280	15	7541	1113	7541	-1113	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCTAGACGTGATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	174265184	174268182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109
ENSMUSG00000016253.13_174265793_174268315_1	chr2	+	669	6	ISM	ENSMUSG00000016253.13	ENSMUST00000016397.7	2280	15	8149	980	8149	-980	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACCTGCTGAGCCGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	174265792	174268315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281
ENSMUSG00000016253.13_174265838_174268379_1	chr2	+	688	6	ISM	ENSMUSG00000016253.13	ENSMUST00000016397.7	2280	15	8194	916	8194	-916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGACACGGACATCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	174265837	174268379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281
ENSMUSG00000016253.13_174265905_174268422_1	chr2	+	664	6	ISM	ENSMUSG00000016253.13	ENSMUST00000016397.7	2280	15	8261	873	8261	-873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCAGTGAGCGCACCGT	NA	NA	NA	NA	NA	NA	NA	NA	174265904	174268422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281
ENSMUSG00000016253.13_174266473_174268739_1	chr2	+	683	6	ISM	ENSMUSG00000016253.13	ENSMUST00000016397.7	2280	15	8829	556	8829	-556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCCTCGAGGTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	174266472	174268739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609
ENSMUSG00000016253.13_174266905_174268842_1	chr2	+	643	6	ISM	ENSMUSG00000016253.13	ENSMUST00000016397.7	2280	15	9261	453	9261	-453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGGTGAACTGAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	174266904	174268842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ENSMUSG00000016253.13_174266945_174268906_1	chr2	+	667	6	ISM	ENSMUSG00000016253.13	ENSMUST00000016397.7	2280	15	9301	389	9301	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCAGAGGACTCGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	174266944	174268906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ENSMUSG00000016253.13_174266993_174268974_1	chr2	+	687	6	ISM	ENSMUSG00000016253.13	ENSMUST00000016397.7	2280	15	9349	321	9349	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGGAAGAAGCAGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	174266992	174268974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ENSMUSG00000016253.13_174268299_174269295_1	chr2	+	726	3	ISM	ENSMUSG00000016253.13	ENSMUST00000016397.7	2280	15	10655	0	10655	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	174268298	174269295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174268423_174268609_174268740_174268823
ENSMUSG00000016253.13_174268387_174269296_1	chr2	+	639	3	ISM	ENSMUSG00000016253.13	ENSMUST00000016397.7	2280	15	10743	-1	10743	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTACTCATTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	174268386	174269296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174268423_174268609_174268740_174268823
ENSMUSG00000016256.11_174269286_174280065_1	chr2	-	1095	5	ISM	ENSMUSG00000016256.11	ENSMUST00000016400.9	1441	6	767	0	767	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTACTTTATTTACA	NA	NA	NA	NA	NA	NA	NA	NA	174280065	174269285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_174269776_174270370_174270537_174270848_174271000_174275280_174275461_174279957
ENSMUSG00000016256.11_174269457_174280645_1	chr2	-	1083	6	FSM	ENSMUSG00000016256.11	ENSMUST00000016400.9	1441	6	187	171	187	-171	multi-exon	FALSE	canonical	NA	NA	NA	NA	2044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCAGGCCTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	174280645	174269456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_174269776_174270370_174270537_174270848_174271000_174275280_174275461_174279957_174280122_174280542
ENSMUSG00000016256.11_174269528_174280720_1	chr2	-	1087	6	FSM	ENSMUSG00000016256.11	ENSMUST00000016400.9	1441	6	112	242	112	-242	multi-exon	FALSE	canonical	NA	NA	NA	NA	1903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGGTAAAGGATGAAACACAA	NA	NA	NA	NA	NA	NA	NA	NA	174280720	174269527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_174269776_174270370_174270537_174270848_174271000_174275280_174275461_174279957_174280122_174280542
ENSMUSG00000016257.16_174306860_174308803_1	chr2	-	1044	3	ISM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	6071	0	2488	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGCAGCTCTTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	174308803	174306859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_174307730_174308518_174308622_174308732
ENSMUSG00000016257.16_174307093_174311200_1	chr2	-	972	5	ISM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	3674	233	91	-233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTGGAGTGAAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	174311200	174307092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129
ENSMUSG00000016257.16_174307133_174311261_1	chr2	-	993	5	ISM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	3613	273	30	245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGAAACCAGTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	174311261	174307132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129
ENSMUSG00000016257.16_174307198_174311298_1	chr2	-	965	5	ISM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	3576	338	-7	180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTCACTCTACAAAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	174311298	174307197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129
ENSMUSG00000016257.16_174307378_174314695_1	chr2	-	759	5	NNC	ENSMUSG00000016257.16	novel	731	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGCTGTTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	174314695	174307377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_174307723_174308518_174308622_174308732_174308804_174311129_174311299_174314624
ENSMUSG00000016257.16_174307378_174314695_2	chr2	-	762	5	NNC	ENSMUSG00000016257.16	novel	731	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGCTGTTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	174314695	174307377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_174307730_174308518_174308622_174308732_174308804_174311133_174311299_174314624
ENSMUSG00000016257.16_174307378_174314695_3	chr2	-	766	5	FSM	ENSMUSG00000016257.16	ENST00000371033.9	731	5	15	-50	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGCTGTTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	174314695	174307377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174311129_174311299_174314624
ENSMUSG00000016257.16_174307378_174314874_1	chr2	-	1035	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	0	518	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGCTGTTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	174314874	174307377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
ENSMUSG00000016308.13_36137948_36146765_1	chrX	+	622	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	0	1110	0	-138	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGAACAAAGCTGGCGCG	NA	NA	NA	NA	NA	NA	NA	NA	36137947	36146765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
ENSMUSG00000016308.13_36138011_36147577_1	chrX	+	1364	6	FSM	ENSMUSG00000016308.13	ENST00000630695.2	1665	6	0	301	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTTATGATTCACG	NA	NA	NA	NA	NA	NA	NA	NA	36138010	36147577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_36138183_36138370_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
ENSMUSG00000016308.13_36138011_36147577_2	chrX	+	1342	5	NNC	ENSMUSG00000016308.13	novel	1665	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTTATGATTCACG	NA	NA	NA	NA	NA	NA	NA	NA	36138010	36147577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_36138183_36138370_36138449_36145309_36145400_36146251_36146341_36146664
ENSMUSG00000016308.13_36138118_36146903_1	chrX	+	590	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	170	972	107	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTTCTGTCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	36138117	36146903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
ENSMUSG00000016308.13_36138118_36147577_1	chrX	+	1257	6	FSM	ENSMUSG00000016308.13	ENST00000630695.2	1665	6	107	301	107	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTTATGATTCACG	NA	NA	NA	NA	NA	NA	NA	NA	36138117	36147577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_36138183_36138370_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
ENSMUSG00000016308.13_36138118_36147648_1	chrX	+	1306	5	NNC	ENSMUSG00000016308.13	novel	1665	6	NA	NA	107	71	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCTTTCAGTGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	36138117	36147648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_36138183_36138370_36138449_36145309_36145400_36146251_36146341_36146664
ENSMUSG00000016308.13_36138118_36147648_2	chrX	+	1328	6	FSM	ENSMUSG00000016308.13	ENST00000630695.2	1665	6	107	230	107	71	multi-exon	FALSE	canonical	NA	NA	NA	NA	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCTTTCAGTGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	36138117	36147648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_36138183_36138370_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
ENSMUSG00000016308.13_36145309_36147879_1	chrX	+	1395	3	ISM	ENSMUSG00000016308.13	ENST00000630695.2	1665	6	7298	-1	7003	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCACACTTTTATTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	36145308	36147879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_36145400_36146251_36146341_36146664
ENSMUSG00000016319.4_36059304_36060983_1	chrX	+	679	2	ISM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	0	1477	0	-1477	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2016	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGCTATTTGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	36059303	36060983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_36059495_36060495
ENSMUSG00000016319.4_36059409_36061471_1	chrX	+	656	3	ISM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	105	989	105	-989	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2672	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATCCTTTTGACACGGT	NA	NA	NA	NA	NA	NA	NA	NA	36059408	36061471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_36059495_36060495_36060983_36061388
ENSMUSG00000016319.4_36060566_36062206_1	chrX	+	725	3	ISM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	1262	254	1262	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3630	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTTCTCCCCGAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	36060565	36062206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_36060983_36061388_36061530_36062039
ENSMUSG00000016319.4_36060746_36062269_1	chrX	+	608	3	ISM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	1442	191	1442	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1948	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGGGCTTGTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	36060745	36062269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_36060983_36061388_36061530_36062039
ENSMUSG00000016319.4_36060932_36062460_1	chrX	+	613	3	ISM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	1628	0	1628	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2609	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTCGTTGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	36060931	36062460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_36060983_36061388_36061530_36062039
ENSMUSG00000016382.16_74830092_74834982_1	chrX	-	631	3	ISM	ENSMUSG00000016382.16	ENSMUST00000114058.8	3032	16	35577	823	35577	-818	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTATTATCTATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	74834982	74830091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_74830506_74834567_74834693_74834890
ENSMUSG00000016382.16_74830229_74837302_1	chrX	-	634	4	ISM	ENSMUSG00000016382.16	ENSMUST00000114058.8	3032	16	33257	960	33257	-955	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTTTGGAGAAAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	74837302	74830228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194
ENSMUSG00000016382.16_74834890_74843038_1	chrX	-	687	6	ISM	ENSMUSG00000016382.16	ENSMUST00000114058.8	3032	16	27521	5621	27521	-5616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCATACTGATTAATATA	NA	NA	NA	NA	NA	NA	NA	NA	74843038	74834889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000
ENSMUSG00000016382.16_74837261_74844172_1	chrX	-	619	6	ISM	ENSMUSG00000016382.16	ENSMUST00000114057.8	3160	16	42497	7987	26387	-7987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACAAGACCTGAACGATG	NA	NA	NA	NA	NA	NA	NA	NA	74844172	74837260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107
ENSMUSG00000016382.16_74837847_74845258_1	chrX	-	642	6	ISM	ENSMUSG00000016382.16	ENSMUST00000114057.8	3160	16	41411	8573	25301	-8573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTGGACTGGAGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	74845258	74837846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181
ENSMUSG00000016382.16_74840066_74848815_1	chrX	-	627	6	ISM	ENSMUSG00000016382.16	ENSMUST00000114057.8	3160	16	37854	10792	21744	-10792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCCAGCTGATGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	74848815	74840065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745
ENSMUSG00000016382.16_74840121_74848878_1	chrX	-	635	6	ISM	ENSMUSG00000016382.16	ENSMUST00000114057.8	3160	16	37791	10847	21681	-10847	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAGCCGAAAGTATGCT	NA	NA	NA	NA	NA	NA	NA	NA	74848878	74840120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745
ENSMUSG00000016382.16_74844154_74859708_1	chrX	-	627	6	ISM	ENSMUSG00000016382.16	ENSMUST00000114058.8	3032	16	10851	14885	10851	-14880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCAGGCTGGCAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	74859708	74844153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689
ENSMUSG00000016382.16_74844197_74859770_1	chrX	-	646	6	ISM	ENSMUSG00000016382.16	ENSMUST00000114058.8	3032	16	10789	14928	10789	-14923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGAAGAGCTTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	74859770	74844196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689
ENSMUSG00000016382.16_74844237_74859853_1	chrX	-	689	6	ISM	ENSMUSG00000016382.16	ENSMUST00000114058.8	3032	16	10706	14968	10706	-14963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGAGATGGTGAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	74859853	74844236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689
ENSMUSG00000016382.16_74845272_74870559_1	chrX	-	666	6	ISM	ENSMUSG00000016382.16	ENSMUST00000114058.8	3032	16	0	16003	0	-15998	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCGGGAAACCTCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	74870559	74845271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478
ENSMUSG00000016382.16_74846130_74918705_1	chrX	-	643	6	ISM	ENSMUSG00000016382.16	ENSMUST00000114059.10	3149	16	83	16870	83	-16856	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGCGGTGTTCTCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	74918705	74846129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
ENSMUSG00000016427.8_36451241_36454713_1	chrX	-	316	3	FSM	ENSMUSG00000016427.8	ENSMUST00000016571.8	419	3	103	0	103	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1489	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTTTATTTTTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	36454713	36451240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_36451395_36453526_36453617_36454641
ENSMUSG00000016458.16_104957010_105002834_1	chr2	+	1771	9	FSM	ENSMUSG00000016458.16	ENST00000332351.9	2959	9	71	1117	71	145	multi-exon	TRUE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCATCCTATCAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	104957009	105002834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_104957788_104963282_104963406_104963746_104963850_104973429_104973508_104993669_104993767_104997162_104997314_104999378_104999469_105000270_105000355_105002567
ENSMUSG00000016458.16_104957341_104973507_1	chr2	+	751	4	ISM	ENSMUSG00000016458.16	ENST00000639563.3	1503	9	199	29182	199	-29182	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGAACTACTTATACCT	NA	NA	NA	NA	NA	NA	NA	NA	104957340	104973507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_104957788_104963282_104963406_104963746_104963850_104973429
ENSMUSG00000016458.16_104957341_105003119_1	chr2	+	1725	9	FSM	ENSMUSG00000016458.16	ENST00000332351.9	2959	9	402	832	199	430	multi-exon	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTCCCATTTACTAAC	NA	NA	NA	NA	NA	NA	NA	NA	104957340	105003119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_104957788_104963282_104963406_104963746_104963850_104973429_104973508_104993669_104993767_104997162_104997314_104999378_104999469_105000270_105000355_105002567
ENSMUSG00000016458.16_104957555_104997256_1	chr2	+	728	6	ISM	ENSMUSG00000016458.16	ENST00000639563.3	1503	9	413	5433	413	-5433	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATAAGAGATATTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	104957554	104997256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_104957788_104963282_104963406_104963746_104963850_104973429_104973508_104993669_104993767_104997162
ENSMUSG00000016458.16_104957555_105003483_1	chr2	+	1875	9	FSM	ENSMUSG00000016458.16	ENST00000332351.9	2959	9	616	468	413	-468	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGGATGTGGAGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	104957554	105003483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_104957788_104963282_104963406_104963746_104963850_104973429_104973508_104993669_104993767_104997162_104997314_104999378_104999469_105000270_105000355_105002567
ENSMUSG00000016458.16_104963281_105003597_1	chr2	+	1758	8	ISM	ENSMUSG00000016458.16	ENST00000332351.9	2959	9	6342	354	2053	-354	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTCCAGGATCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	104963280	105003597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_104963406_104963746_104963850_104973429_104973508_104993669_104993767_104997162_104997314_104999378_104999469_105000270_105000355_105002567
ENSMUSG00000016458.16_104963335_105003650_1	chr2	+	1757	8	ISM	ENSMUSG00000016458.16	ENST00000332351.9	2959	9	6396	301	2107	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATCTGCAAGTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	104963334	105003650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_104963406_104963746_104963850_104973429_104973508_104993669_104993767_104997162_104997314_104999378_104999469_105000270_105000355_105002567
ENSMUSG00000016458.16_104963352_105002612_1	chr2	+	711	8	ISM	ENSMUSG00000016458.16	ENSMUST00000111098.8	2395	9	2124	1345	2124	-77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGCGCTCAGACGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	104963351	105002612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_104963406_104963746_104963850_104973429_104973508_104993669_104993767_104997162_104997314_104999378_104999469_105000270_105000364_105002567
ENSMUSG00000016458.16_104963388_105003719_1	chr2	+	1773	8	ISM	ENSMUSG00000016458.16	ENST00000332351.9	2959	9	6449	232	2160	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTTGTTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	104963387	105003719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_104963406_104963746_104963850_104973429_104973508_104993669_104993767_104997162_104997314_104999378_104999469_105000270_105000355_105002567
ENSMUSG00000016458.16_104973447_105003844_1	chr2	+	1760	6	ISM	ENSMUSG00000016458.16	ENST00000332351.9	2959	9	16508	107	12219	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTAGCTGCATCACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	104973446	105003844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_104973508_104993669_104993767_104997162_104997314_104999378_104999469_105000270_105000355_105002567
ENSMUSG00000016458.16_104993669_105003957_1	chr2	+	1813	5	ISM	ENSMUSG00000016458.16	ENSMUST00000111099.2	2441	10	32441	4	32441	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCAGGAGTCTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	104993668	105003957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_104993767_104997162_104997314_104999378_104999469_105000270_105000355_105002567
ENSMUSG00000016481.16_194786098_194799979_1	chr1	-	702	6	ISM	ENSMUSG00000016481.16	ENSMUST00000075451.12	1651	10	13890	0	13652	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGTGGTTCATACTT	NA	NA	NA	NA	NA	NA	NA	NA	194799979	194786097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786
ENSMUSG00000016481.16_194789126_194800188_1	chr1	-	793	5	ISM	ENSMUSG00000016481.16	ENSMUST00000075451.12	1651	10	13681	3028	13443	-3028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATATGCACATCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	194800188	194789125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786
ENSMUSG00000016481.16_194789126_194800188_2	chr1	-	785	4	NNC	ENSMUSG00000016481.16	novel	2776	10	NA	NA	13443	-3028	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATATGCACATCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	194800188	194789125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_194789231_194793387_194793464_194796947_194797150_194799786
ENSMUSG00000016481.16_194793388_194806083_1	chr1	-	774	5	ISM	ENSMUSG00000016481.16	ENSMUST00000075451.12	1651	10	7786	7290	7548	-7290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAAAGCCACATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	194806083	194793387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997
ENSMUSG00000016481.16_194796963_194811554_1	chr1	-	775	4	ISM	ENSMUSG00000016481.16	ENSMUST00000075451.12	1651	10	2315	10865	2077	-10865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTACAAATGTAGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	194811554	194796962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_194797150_194799786_194800189_194805997_194806084_194811454
ENSMUSG00000016481.16_194797090_194812317_1	chr1	-	828	5	ISM	ENSMUSG00000016481.16	ENSMUST00000075451.12	1651	10	1552	10992	1314	-10992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATATTATTATGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	194812317	194797089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137
ENSMUSG00000016481.16_194799963_194813688_1	chr1	-	785	5	ISM	ENSMUSG00000016481.16	ENSMUST00000075451.12	1651	10	181	13865	-36	-13865	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCTCCTCCCTATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	194813688	194799962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
ENSMUSG00000016487.16_146790087_146879747_1	chr6	+	484	4	ISM	ENSMUSG00000016487.16	ENSMUST00000111623.9	4782	28	0	53776	0	-53776	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCTTCTGTATGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	146790086	146879747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541
ENSMUSG00000016487.16_146917795_146922929_1	chr6	+	505	4	ISM	ENSMUSG00000016487.16	ENSMUST00000111623.9	4782	28	127708	10594	127708	-10594	internal_fragment	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGCAGGATCTGGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	146917794	146922929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_146917892_146920531_146920680_146920957_146921087_146922798
ENSMUSG00000016487.16_146922852_146927725_1	chr6	+	495	5	ISM	ENSMUSG00000016487.16	ENSMUST00000111623.9	4782	28	132765	5798	132765	-5798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGAATATGCCCCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	146922851	146927725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652
ENSMUSG00000016487.16_146923687_146928879_1	chr6	+	481	5	ISM	ENSMUSG00000016487.16	ENSMUST00000111623.9	4782	28	133600	4644	133600	-4644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACATTTGGCGACCCATT	NA	NA	NA	NA	NA	NA	NA	NA	146923686	146928879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805
ENSMUSG00000016487.16_146927704_146931624_1	chr6	+	485	4	ISM	ENSMUSG00000016487.16	ENSMUST00000111623.9	4782	28	137617	1899	137617	-1899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGGCATCAACAATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	146927703	146931624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_146927779_146928805_146928995_146931058_146931236_146931580
ENSMUSG00000016487.16_146928924_146931996_1	chr6	+	499	4	ISM	ENSMUSG00000016487.16	ENSMUST00000111623.9	4782	28	138837	1527	138837	-1527	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTCTTCTGCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	146928923	146931996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_146928995_146931058_146931236_146931580_146931647_146931811
ENSMUSG00000016487.16_146931158_146932166_1	chr6	+	499	3	ISM	ENSMUSG00000016487.16	ENSMUST00000111623.9	4782	28	141071	1357	141071	-1357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGCTCACATCCCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	146931157	146932166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_146931236_146931580_146931647_146931811
ENSMUSG00000016494.10_194621259_194643587_1	chr1	+	2322	8	FSM	ENSMUSG00000016494.10	ENSMUST00000016638.8	2454	8	132	0	76	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGTGGCCCTATAATG	NA	NA	NA	NA	NA	NA	NA	NA	194621258	194643587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_194621353_194630146_194630315_194631612_194631873_194633246_194633328_194640724_194640882_194641117_194641171_194641373_194641539_194642243
ENSMUSG00000016494.10_194630179_194643074_1	chr1	+	1839	7	ISM	ENSMUSG00000016494.10	ENSMUST00000110815.9	2554	8	8996	513	8996	-513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTCAACCTAGACAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	194630178	194643074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_194630315_194631612_194631873_194633246_194633328_194640724_194640882_194641117_194641171_194641373_194641539_194642087
ENSMUSG00000016494.10_194633245_194643587_1	chr1	+	1958	5	ISM	ENSMUSG00000016494.10	ENSMUST00000110815.9	2554	8	12062	0	12062	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGTGGCCCTATAATG	NA	NA	NA	NA	NA	NA	NA	NA	194633244	194643587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_194633328_194640724_194640882_194641117_194641171_194641373_194641539_194642087
ENSMUSG00000016495.13_29326105_29327780_1	chr19	-	322	2	ISM	ENSMUSG00000016495.13	ENSMUST00000016639.12	1012	7	11590	0	11493	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAATCATGGCAGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	29327780	29326104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_29326406_29327759
ENSMUSG00000016495.13_29327797_29338255_1	chr19	-	330	4	ISM	ENSMUSG00000016495.13	ENSMUST00000016639.12	1012	7	1115	1692	1018	-1692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGGCTACGGAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	29338255	29327796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_29327870_29328443_29328575_29335716_29335804_29338216
ENSMUSG00000016495.13_29335776_29339370_1	chr19	-	313	3	ISM	ENSMUSG00000016495.13	ENSMUST00000143467.8	1020	6	0	9777	0	-9671	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTATGAACGAAAACATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	29339370	29335775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_29335804_29338216_29338328_29339196
ENSMUSG00000016498.11_29414791_29423334_1	chr19	+	161	2	ISM	ENSMUSG00000016498.11	ENST00000397747.5	871	4	165	24708	165	-24708	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTAGGATCCTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	29414790	29423334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29414936_29423318
ENSMUSG00000016498.11_29414840_29423386_1	chr19	+	164	2	ISM	ENSMUSG00000016498.11	ENST00000397747.5	871	4	214	24656	214	-24656	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTAGAGGTTATCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	29414839	29423386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29414936_29423318
ENSMUSG00000016498.11_29414879_29423450_1	chr19	+	189	2	ISM	ENSMUSG00000016498.11	ENST00000397747.5	871	4	253	24592	253	-24592	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACATCAGGACCCCCGAA	NA	NA	NA	NA	NA	NA	NA	NA	29414878	29423450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29414936_29423318
ENSMUSG00000016498.11_29423459_29431901_1	chr19	+	167	2	ISM	ENSMUSG00000016498.11	ENST00000397747.5	871	4	8833	16141	8833	-16141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTTCATCCCGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	29423458	29431901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29423589_29431864
ENSMUSG00000016498.11_29423514_29431957_1	chr19	+	168	2	ISM	ENSMUSG00000016498.11	ENST00000397747.5	871	4	8888	16085	8888	-16085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGAGAAAGAGGATCTAG	NA	NA	NA	NA	NA	NA	NA	NA	29423513	29431957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29423589_29431864
ENSMUSG00000016498.11_29423560_29432015_1	chr19	+	180	2	ISM	ENSMUSG00000016498.11	ENST00000397747.5	871	4	8934	16027	8934	-16027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTAAGCCTGTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	29423559	29432015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29423589_29431864
ENSMUSG00000016498.11_29431965_29448042_1	chr19	+	191	2	ISM	ENSMUSG00000016498.11	ENST00000397747.5	871	4	17339	0	17339	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCCGAAGAGGAGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	29431964	29448042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29432029_29447915
ENSMUSG00000016503.19_146885467_146890117_1	chr5	+	761	6	ISM	ENSMUSG00000016503.19	ENSMUST00000146511.8	1298	9	0	2307	0	-2299	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGTAGGCAGGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	146885466	146890117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036
ENSMUSG00000016503.19_146885642_146890887_1	chr5	+	816	7	ISM	ENSMUSG00000016503.19	ENSMUST00000132102.2	1426	8	127	1529	127	-1529	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTCTCCCGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	146885641	146890887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657
ENSMUSG00000016503.19_146885642_146891998_1	chr5	+	881	8	FSM	ENSMUSG00000016503.19	ENSMUST00000132102.2	1426	8	127	418	127	-418	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGCTGCTGGGGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	146885641	146891998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933
ENSMUSG00000016503.19_146887380_146892228_1	chr5	+	746	8	ISM	ENSMUSG00000016503.19	ENSMUST00000146511.8	1298	9	1913	196	1865	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCCTCCTAAGAGGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	146887379	146892228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933_146891994_146892177
ENSMUSG00000016503.19_146888683_146892416_1	chr5	+	958	5	ISM	ENSMUSG00000016503.19	ENSMUST00000132102.2	1426	8	3168	0	3168	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCGACTCTTTGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	146888682	146892416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933
ENSMUSG00000016510.12_146891330_146895779_1	chr5	-	1599	3	ISM	ENSMUSG00000016510.12	ENSMUST00000016654.9	2131	5	4818	0	4780	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTGCATTTGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	146895779	146891329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_146892626_146893596_146893755_146895634
ENSMUSG00000016510.12_146891330_146895851_1	chr5	-	1671	3	ISM	ENSMUSG00000016510.12	ENSMUST00000016654.9	2131	5	4746	0	4708	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTGCATTTGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	146895851	146891329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_146892626_146893596_146893755_146895634
ENSMUSG00000016510.12_146891626_146900052_1	chr5	-	1632	4	ISM	ENSMUSG00000016510.12	ENSMUST00000016654.9	2131	5	545	296	507	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGAAGGGAAAGCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	146900052	146891625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900030
ENSMUSG00000016510.12_146891702_146900108_1	chr5	-	1612	4	ISM	ENSMUSG00000016510.12	ENSMUST00000016654.9	2131	5	489	372	451	-372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGAGCCAACTCCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	146900108	146891701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900030
ENSMUSG00000016510.12_146891755_146900168_1	chr5	-	1619	4	ISM	ENSMUSG00000016510.12	ENSMUST00000110564.8	1257	5	391	-422	391	422	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCAGCTGCCTTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	146900168	146891754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900030
ENSMUSG00000016526.9_131056923_131065986_1	chr1	-	1342	3	FSM	ENSMUSG00000016526.9	ENSMUST00000016670.9	3164	3	91	1731	91	-1731	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTGCATGATAGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	131065986	131056922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_131057983_131063996_131064109_131065816
ENSMUSG00000016528.11_130982552_131025093_1	chr1	-	1269	10	FSM	ENSMUSG00000016528.11	ENSMUST00000016672.11	2854	10	470	1115	470	-1115	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCACTCCTCACTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	131025093	130982551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_130982973_130983495_130983577_130983665_130983752_130984150_130984276_130984625_130984702_130985230_130985358_130985737_130985818_130986088_130986154_130986359_130986500_131025025
ENSMUSG00000016528.11_130982888_131025425_1	chr1	-	1265	10	FSM	ENSMUSG00000016528.11	ENSMUST00000016672.11	2854	10	138	1451	138	-1451	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTCAAGAGGCGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	131025425	130982887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_130982973_130983495_130983577_130983665_130983752_130984150_130984276_130984625_130984702_130985230_130985358_130985737_130985818_130986088_130986154_130986359_130986500_131025025
ENSMUSG00000016534.16_37493939_37520938_1	chrX	-	1074	5	ISM	ENSMUSG00000016534.16	ENSMUST00000016678.14	1769	9	24393	0	24393	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGTTTCAATTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	37520938	37493938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_37494449_37513143_37513309_37514239_37514304_37519794_37519918_37520726
ENSMUSG00000016534.16_37494107_37524431_1	chrX	-	1065	6	ISM	ENSMUSG00000016534.16	ENSMUST00000016678.14	1769	9	20900	168	20900	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAACAAACACACAT	NA	NA	NA	NA	NA	NA	NA	NA	37524431	37494106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_37494449_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272
ENSMUSG00000016534.16_37494347_37529108_1	chrX	-	926	7	ISM	ENSMUSG00000016534.16	ENSMUST00000016678.14	1769	9	16223	408	16223	-408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAAGCGCCATCATACT	NA	NA	NA	NA	NA	NA	NA	NA	37529108	37494346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_37494449_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007
ENSMUSG00000016534.16_37494347_37529221_1	chrX	-	1039	7	ISM	ENSMUSG00000016534.16	ENSMUST00000016678.14	1769	9	16110	408	16110	-408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAAGCGCCATCATACT	NA	NA	NA	NA	NA	NA	NA	NA	37529221	37494346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_37494449_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007
ENSMUSG00000016534.16_37508384_37513232_1	chrX	-	2434	2	ISM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	32099	0	32099	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATTTGCTCACATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	37513232	37508383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_37510729_37513143
ENSMUSG00000016534.16_37508673_37519820_1	chrX	-	2311	4	ISM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	25511	289	25511	-289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACACTATTATTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	37519820	37508672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794
ENSMUSG00000016534.16_37508854_37520811_1	chrX	-	2312	5	ISM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	24520	470	24520	-470	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACTAATTGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	37520811	37508853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726
ENSMUSG00000016534.16_37508926_37520908_1	chrX	-	2337	5	ISM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	24423	542	24423	-542	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAAAGGATGGATTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	37520908	37508925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726
ENSMUSG00000016534.16_37509032_37524336_1	chrX	-	2325	6	ISM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	20995	648	20995	-648	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGAACTGCATGGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	37524336	37509031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272
ENSMUSG00000016534.16_37509205_37529087_1	chrX	-	2327	7	ISM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	16244	821	16244	-821	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACATGATATATATGCACA	NA	NA	NA	NA	NA	NA	NA	NA	37529087	37509204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007
ENSMUSG00000016534.16_37509354_37530941_1	chrX	-	2352	8	ISM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	14390	970	14390	-970	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTACATACTGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	37530941	37509353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901
ENSMUSG00000016534.16_37509552_37545291_1	chrX	-	2396	9	FSM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	40	1168	40	-1168	multi-exon	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTACTGTTCGTTCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	37545291	37509551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ENSMUSG00000016534.16_37509603_37545291_1	chrX	-	2345	9	FSM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	40	1219	40	-1219	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATTTGGCTTTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	37545291	37509602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ENSMUSG00000016534.16_37509666_37545331_1	chrX	-	2322	9	FSM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	0	1282	0	-1282	multi-exon	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGCCTTAGTCCATTA	NA	NA	NA	NA	NA	NA	NA	NA	37545331	37509665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ENSMUSG00000016534.16_37513144_37531017_1	chrX	-	1053	7	ISM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	14314	4760	14314	-4760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAAACAAACCTTACTC	NA	NA	NA	NA	NA	NA	NA	NA	37531017	37513143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901
ENSMUSG00000016541.11_85220446_85275871_1	chr15	+	1147	8	ISM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	0	71542	0	-71542	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTGAAATGACGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	85220445	85275871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838
ENSMUSG00000016541.11_85220621_85277562_1	chr15	+	1073	9	ISM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	175	69851	175	-69851	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	865	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAAAGAAAGCACGAACA	NA	NA	NA	NA	NA	NA	NA	NA	85220620	85277562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537
ENSMUSG00000016541.11_85220682_85277604_1	chr15	+	1054	9	ISM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	236	69809	236	-69809	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGAGGGTGACATCG	NA	NA	NA	NA	NA	NA	NA	NA	85220681	85277604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537
ENSMUSG00000016541.11_85220717_85277671_1	chr15	+	1086	9	ISM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	271	69742	271	-69742	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	866	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGTGCTACAAGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	85220716	85277671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537
ENSMUSG00000016541.11_85243715_85346498_1	chr15	+	1079	10	ISM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	23269	915	23269	-915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCTGTGCGAAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	85243714	85346498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480
ENSMUSG00000016541.11_85243779_85346539_1	chr15	+	1056	10	ISM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	23333	874	23333	-874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATGTCATTGCCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	85243778	85346539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480
ENSMUSG00000016541.11_85243830_85346591_1	chr15	+	1057	10	ISM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	23384	822	23384	-822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAAAATGGGCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	85243829	85346591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480
ENSMUSG00000016541.11_85249532_85347163_1	chr15	+	1105	10	ISM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	29086	250	29086	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	910	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTCTCATCTCTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	85249531	85347163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ENSMUSG00000016541.11_85259521_85347135_1	chr15	+	1050	9	ISM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	39075	278	39075	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAACACATTCAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	85259520	85347135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ENSMUSG00000016541.11_85259566_85347191_1	chr15	+	1061	9	ISM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	39120	222	39120	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAGTATTGGACATGTA	NA	NA	NA	NA	NA	NA	NA	NA	85259565	85347191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ENSMUSG00000016541.11_85259604_85347254_1	chr15	+	1086	9	ISM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	39158	159	39158	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGCTACAAGTGGACGT	NA	NA	NA	NA	NA	NA	NA	NA	85259603	85347254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ENSMUSG00000016541.11_85267105_85347413_1	chr15	+	1070	7	ISM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	46659	0	46659	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGACCCTTGATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	85267104	85347413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ENSMUSG00000016554.10_77843198_77844296_1	chr15	-	552	3	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	10717	0	10717	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGTCCTGTGCTCCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	77844296	77843197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77843323_77843711_77843996_77844153
ENSMUSG00000016554.10_77843198_77845943_1	chr15	-	682	4	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	9070	0	9070	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	885	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGTCCTGTGCTCCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	77845943	77843197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813
ENSMUSG00000016554.10_77843782_77846696_1	chr15	-	630	5	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	8317	584	8317	-584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTGATGGCACCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	77846696	77843781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639
ENSMUSG00000016554.10_77843782_77846739_1	chr15	-	673	5	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	8274	584	8274	-584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTGATGGCACCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	77846739	77843781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639
ENSMUSG00000016554.10_77843940_77847426_1	chr15	-	595	6	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	7587	742	7587	-742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTTTAAGCCCAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	77847426	77843939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377
ENSMUSG00000016554.10_77844279_77848272_1	chr15	-	566	6	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	6741	1081	6741	-1081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCGTCAGAAGCTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	77848272	77844278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219
ENSMUSG00000016554.10_77845874_77848378_1	chr15	-	594	5	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	6635	2676	6635	-2676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCCAACGGGGAAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	77848378	77845873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219
ENSMUSG00000016554.10_77845874_77849215_1	chr15	-	681	6	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	5798	2676	5798	-2676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCCAACGGGGAAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	77849215	77845873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102
ENSMUSG00000016554.10_77846046_77849215_1	chr15	-	611	5	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	5798	2848	5798	-2848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCGGCTCTTGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	77849215	77846045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102
ENSMUSG00000016554.10_77846693_77850410_1	chr15	-	545	5	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	4603	3495	4603	-3495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGGAAGCCACCTACATC	NA	NA	NA	NA	NA	NA	NA	NA	77850410	77846692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337
ENSMUSG00000016554.10_77846693_77850967_1	chr15	-	631	6	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	4046	3495	4046	-3495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGGAAGCCACCTACATC	NA	NA	NA	NA	NA	NA	NA	NA	77850967	77846692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881
ENSMUSG00000016554.10_77847437_77851585_1	chr15	-	577	6	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	3428	4239	3428	-4239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTCCAGAGAGTCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	77851585	77847436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502
ENSMUSG00000016554.10_77848220_77852723_1	chr15	-	655	7	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	2290	5022	2290	-5022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	724	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCACCCTTTGCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	77852723	77848219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656
ENSMUSG00000016554.10_77848303_77852723_1	chr15	-	572	7	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	2290	5105	2290	-5105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAAGGAGTGAGAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	77852723	77848302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656
ENSMUSG00000016554.10_77848335_77852789_1	chr15	-	606	7	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	2224	5137	2224	-5137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTACTACGACAAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	77852789	77848334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656
ENSMUSG00000016554.10_77849172_77854920_1	chr15	-	557	7	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	93	5974	93	-5974	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAGGAGATGGACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	77854920	77849171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ENSMUSG00000016559.15_115912787_115915299_1	chr11	-	1957	4	NNC	ENSMUSG00000016559.15	novel	1993	4	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	29707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTAGCCTTGGCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	115915299	115912786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_115914362_115914450_115914600_115914707_115914846_115915204
ENSMUSG00000016559.15_115914212_115914607_1	chr11	-	296	2	ISM	ENSMUSG00000016559.15	ENST00000591890.5	685	3	239	253	239	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAGTAAATTCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	115914607	115914211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115914362_115914461
ENSMUSG00000016559.15_115915296_115916195_1	chr11	-	314	2	ISM	ENSMUSG00000016559.15	ENSMUST00000106454.8	2514	6	2593	2558	-865	-1083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGCCCGTTCTGCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	115916195	115915295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115915545_115916130
ENSMUSG00000016559.15_115915346_115916246_1	chr11	-	315	2	ISM	ENSMUSG00000016559.15	ENSMUST00000106454.8	2514	6	2542	2608	-916	-1133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTCGGGGGGCTTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	115916246	115915345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115915545_115916130
ENSMUSG00000016559.15_115915453_115918788_1	chr11	-	350	3	ISM	ENSMUSG00000016559.15	ENSMUST00000106454.8	2514	6	0	2715	0	-1240	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCGCGTCGGCGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	115918788	115915452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115915545_115916130_115916282_115918681
ENSMUSG00000016619.11_84807650_84819169_1	chr15	+	654	5	ISM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	38	7995	0	-5039	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCTGCCCTGGGAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	84807649	84819169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064
ENSMUSG00000016619.11_84807755_84819221_1	chr15	+	601	5	ISM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	143	7943	105	-4987	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCGCGATTGGATAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	84807754	84819221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064
ENSMUSG00000016664.17_83261233_83263233_1	chr15	-	733	2	ISM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	53783	914	53783	-910	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCGGGGTTCTATGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	83263233	83261232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83261932_83263199
ENSMUSG00000016664.17_83261275_83263298_1	chr15	-	756	2	ISM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	53718	956	53718	-952	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCATTTCTCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	83263298	83261274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83261932_83263199
ENSMUSG00000016664.17_83261355_83263357_1	chr15	-	735	2	ISM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	53659	1036	53659	-1032	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGCTATACTTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	83263357	83261354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83261932_83263199
ENSMUSG00000016664.17_83261539_83266084_1	chr15	-	835	4	ISM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	50932	1220	50932	-1216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGCTCTCTCTATCAT	NA	NA	NA	NA	NA	NA	NA	NA	83266084	83261538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962
ENSMUSG00000016664.17_83263269_83272871_1	chr15	-	826	6	ISM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	44145	2950	44145	-2946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGTGCGAGTTCGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	83272871	83263268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715
ENSMUSG00000016664.17_83263929_83274712_1	chr15	-	743	6	ISM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	42304	3610	42304	-3606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGGCAGCAGCATCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	83274712	83263928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623
ENSMUSG00000016664.17_83263978_83274768_1	chr15	-	750	6	ISM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	42248	3659	42248	-3655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCACGCAGTTACAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	83274768	83263977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623
ENSMUSG00000016664.17_83266026_83276755_1	chr15	-	802	6	ISM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	40261	5707	40261	-5703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTGTCACCCTAACAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	83276755	83266025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701
ENSMUSG00000016664.17_83270946_83286166_1	chr15	-	741	5	ISM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	30850	10627	30850	-10623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTGAAGAGAAGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	83286166	83270945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067
ENSMUSG00000016664.17_83271026_83348753_1	chr15	-	789	6	ISM	ENSMUSG00000016664.17	ENSMUST00000171436.8	3693	11	54	11218	18	-10703	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAAGTCCCTGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	83348753	83271025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
ENSMUSG00000016664.17_83272751_83348753_1	chr15	-	741	5	ISM	ENSMUSG00000016664.17	ENSMUST00000171436.8	3693	11	54	12943	18	-12428	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAGATAGAAAAATGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	83348753	83272750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
ENSMUSG00000016757.12_83460264_83461996_1	chr15	-	1035	2	ISM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	17362	973	17362	-973	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGTCCTAGTGTTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	83461996	83460263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83461250_83461947
ENSMUSG00000016757.12_83460540_83464749_1	chr15	-	1054	5	ISM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	14609	1249	14609	-1249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCGCCAGAGCCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	83464749	83460539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695
ENSMUSG00000016757.12_83460668_83465885_1	chr15	-	1041	6	ISM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	13473	1377	13473	-1377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTCAGAATCTCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	83465885	83460667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868
ENSMUSG00000016757.12_83460708_83465954_1	chr15	-	1070	6	ISM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	13404	1417	13404	-1417	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGTTTGGGAACCCGG	NA	NA	NA	NA	NA	NA	NA	NA	83465954	83460707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868
ENSMUSG00000016757.12_83460863_83466337_1	chr15	-	1033	7	ISM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	13021	1572	13021	-1572	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGACTGGGCTCCGAC	NA	NA	NA	NA	NA	NA	NA	NA	83466337	83460862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245
ENSMUSG00000016757.12_83461211_83471106_1	chr15	-	1037	10	ISM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	8252	1920	8252	-1920	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCCCGACTGCGAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	83471106	83461210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051
ENSMUSG00000016757.12_83462055_83471320_1	chr15	-	1016	10	ISM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	8038	2764	8038	-2764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTGGCATGTGCCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	83471320	83462054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274
ENSMUSG00000016757.12_83464331_83472778_1	chr15	-	1042	9	ISM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	6580	5040	6580	-5040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACGACTATGAGAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	83472778	83464330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703
ENSMUSG00000016757.12_83466313_83479228_1	chr15	-	1064	8	ISM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	130	7022	130	-7022	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGAACCTTCAACCTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	83479228	83466312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
ENSMUSG00000016831.13_52523191_52529155_1	chr14	+	966	5	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	6588	4703	6588	-4703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATGTTGCCTTCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	52523190	52529155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931
ENSMUSG00000016831.13_52523191_52529199_1	chr14	+	1010	5	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	6588	4659	6588	-4659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTTATCCCAGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	52523190	52529199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931
ENSMUSG00000016831.13_52524214_52529333_1	chr14	+	947	4	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	7611	4525	7611	-4525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCATGCAACTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	52524213	52529333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_52524447_52524757_52524989_52528217_52528299_52528931
ENSMUSG00000016831.13_52524271_52529388_1	chr14	+	945	4	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	7668	4470	7668	-4470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGCCCCCAACTCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	52524270	52529388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_52524447_52524757_52524989_52528217_52528299_52528931
ENSMUSG00000016831.13_52524839_52529657_1	chr14	+	957	3	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	8236	4201	8236	-4201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGTAGTTCCTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	52524838	52529657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_52524989_52528217_52528299_52528931
ENSMUSG00000016831.13_52529432_52531265_1	chr14	+	1016	3	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	12829	2593	12829	-2593	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTAGGGTTTCAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	52529431	52531265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_52529676_52529976_52530141_52530657
ENSMUSG00000016831.13_52529525_52531303_1	chr14	+	961	3	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	12922	2555	12922	-2555	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATCCCAAGTGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	52529524	52531303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_52529676_52529976_52530141_52530657
ENSMUSG00000016831.13_52529984_52531452_1	chr14	+	952	2	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	13381	2406	13381	-2406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCAGACCCCAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	52529983	52531452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_52530141_52530657
ENSMUSG00000016833.15_100946493_100951895_1	chr5	+	498	5	FSM	ENSMUSG00000016833.15	ENSMUST00000112901.2	820	5	-120	442	0	-382	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCACTCCTGCACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	100946492	100951895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100950918_100950977_100951835
ENSMUSG00000016833.15_100946615_100952327_1	chr5	+	506	6	FSM	ENSMUSG00000016833.15	ENSMUST00000016977.15	638	6	122	10	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAACTAATTTGAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	100946614	100952327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100950918_100950977_100951835_100951896_100952197
ENSMUSG00000016833.15_100946615_100952337_1	chr5	+	516	6	FSM	ENSMUSG00000016833.15	ENSMUST00000016977.15	638	6	122	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTGGAAATGTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	100946614	100952337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100950918_100950977_100951835_100951896_100952197
ENSMUSG00000016918.16_12788894_12856773_1	chr1	+	479	4	ISM	ENSMUSG00000016918.16	ENST00000616868.1	3211	20	219	61893	141	-61893	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTGCCGTGCTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	12788893	12856773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_12789123_12798817_12798913_12856302_12856376_12856691
ENSMUSG00000016918.16_12789024_12856882_1	chr1	+	458	4	ISM	ENSMUSG00000016918.16	ENST00000616868.1	3211	20	349	61784	271	-61784	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCCTTGTGCTCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	12789023	12856882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_12789123_12798817_12798913_12856302_12856376_12856691
ENSMUSG00000016918.16_12878175_12890677_1	chr1	+	453	4	ISM	ENSMUSG00000016918.16	ENST00000616868.1	3211	20	89500	27989	89422	-27989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTTGACTCTCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	12878174	12890677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_12878248_12887561_12887713_12888601_12888778_12890624
ENSMUSG00000016918.16_12888682_12906379_1	chr1	+	455	5	ISM	ENSMUSG00000016918.16	ENST00000616868.1	3211	20	100007	12287	99929	-12287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGTAAGGGACCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	12888681	12906379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336
ENSMUSG00000016918.16_12888750_12906437_1	chr1	+	445	5	ISM	ENSMUSG00000016918.16	ENST00000616868.1	3211	20	100075	12229	99997	-12229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCGCGGATTGCATGACA	NA	NA	NA	NA	NA	NA	NA	NA	12888749	12906437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336
ENSMUSG00000016918.16_12891033_12908681_1	chr1	+	489	4	ISM	ENSMUSG00000016918.16	ENST00000616868.1	3211	20	102358	9985	102280	-9985	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTTACCACCAAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	12891032	12908681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_12891076_12892193_12892324_12906336_12906554_12908582
ENSMUSG00000016918.16_12892284_12908782_1	chr1	+	457	3	ISM	ENSMUSG00000016918.16	ENST00000616868.1	3211	20	103609	9884	103531	-9884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGACAGCAACAATGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	12892283	12908782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_12892324_12906336_12906554_12908582
ENSMUSG00000016918.16_12911713_12918661_1	chr1	+	446	4	ISM	ENSMUSG00000016918.16	ENST00000616868.1	3211	20	123038	5	122960	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAGCCTGGACATTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	12911712	12918661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_12911733_12912872_12913049_12918318_12918462_12918554
ENSMUSG00000016921.15_162773482_162779041_1	chr2	+	3488	6	NNC	ENSMUSG00000016921.15	novel	3527	6	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTTCTTCATTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	162773481	162779041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_162773698_162773913_162774067_162775354_162775471_162775573_162775783_162776147_162776232_162776331
ENSMUSG00000016921.15_162773482_162779041_2	chr2	+	3487	6	NNC	ENSMUSG00000016921.15	novel	3527	6	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTTCTTCATTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	162773481	162779041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776337
ENSMUSG00000016933.18_160573757_160603774_1	chr2	+	3741	31	ISM	ENSMUSG00000016933.18	ENSMUST00000109462.8	5107	32	104	1432	104	-1432	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCCATTTGAAGATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	160573756	160603774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658
ENSMUSG00000016933.18_160594407_160605051_1	chr2	+	3739	21	ISM	ENSMUSG00000016933.18	ENSMUST00000109462.8	5107	32	20754	155	20754	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGGTCCAGGCCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	160594406	160605051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ENSMUSG00000016942.7_78324412_78345580_1	chr15	-	2277	16	FSM	ENSMUSG00000016942.7	ENST00000381792.6	2277	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTCTACAGAGCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	78345580	78324411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_78324573_78324807_78325017_78326481_78326754_78327876_78328046_78328295_78328413_78329483_78329598_78330403_78330503_78330862_78331009_78336675_78336786_78336991_78337105_78338344_78338482_78339113_78339319_78343629_78343672_78343944_78344124_78344639_78344708_78345444
ENSMUSG00000016942.7_78343632_78352669_1	chr15	-	665	6	ISM	ENSMUSG00000016942.7	ENST00000406856.7	2659	18	140	19220	140	-15647	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTACGCTGCTCTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	78352669	78343631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_78343672_78343944_78344124_78344639_78344708_78345444_78345579_78349308_78349509_78352625
ENSMUSG00000016946.7_24267961_24276738_1	chr17	-	608	3	ISM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	15721	1253	15721	-1253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTGAGCACCAGGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	24276738	24267960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24268419_24274898_24275025_24276714
ENSMUSG00000016946.7_24268025_24276778_1	chr17	-	584	3	ISM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	15681	1317	15681	-1317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGCAGCCGCCGCAACTC	NA	NA	NA	NA	NA	NA	NA	NA	24276778	24268024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24268419_24274898_24275025_24276714
ENSMUSG00000016946.7_24268290_24292199_1	chr17	-	601	6	FSM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	260	1582	260	-1582	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCTAGAGGTCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	24292199	24268289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195_24278288_24279216_24279326_24292150
ENSMUSG00000016946.7_24268392_24292309_1	chr17	-	609	6	FSM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	150	1684	150	-1684	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGAATGCTGAGAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	24292309	24268391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195_24278288_24279216_24279326_24292150
ENSMUSG00000016946.7_24274976_24292459_1	chr17	-	655	5	ISM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	0	8268	0	-8268	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCCTCTGTGTGGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	24292459	24274975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24275025_24276714_24276811_24278195_24278288_24279216_24279326_24292150
ENSMUSG00000017009.4_164266167_164285106_1	chr2	-	2448	5	NNC	ENSMUSG00000017009.4	novel	2458	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCAGTTTTATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	164285106	164266166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_164268158_164270822_164271009_164271599_164271647_164273106_164273234_164285009
ENSMUSG00000017009.4_164266167_164285106_2	chr2	-	2451	5	NNC	ENSMUSG00000017009.4	novel	2458	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCAGTTTTATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	164285106	164266166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_164268158_164270812_164271009_164271599_164271647_164273106_164273227_164285009
ENSMUSG00000017057.10_35375880_35407732_1	chrX	+	703	6	ISM	ENSMUSG00000017057.10	ENSMUST00000033418.8	3712	11	117	27180	117	-27180	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCACAAAATTTTAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	35375879	35407732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_35375929_35390297_35390438_35394256_35394396_35396616_35396738_35404865_35405051_35407663
ENSMUSG00000017057.10_35404934_35432563_1	chrX	+	729	7	ISM	ENSMUSG00000017057.10	ENSMUST00000033418.8	3712	11	29171	2349	29171	-2349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGATTTCTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	35404933	35432563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_35405051_35407663_35407816_35412302_35412351_35412631_35412765_35415670_35415768_35419195_35419281_35432466
ENSMUSG00000017057.10_35407682_35432723_1	chrX	+	754	6	ISM	ENSMUSG00000017057.10	ENSMUST00000033418.8	3712	11	31919	2189	31919	-2189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACCAAAGGAGCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	35407681	35432723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_35407816_35412302_35412351_35412631_35412765_35415670_35415768_35419195_35419281_35432466
ENSMUSG00000017057.10_35412692_35432926_1	chrX	+	715	4	ISM	ENSMUSG00000017057.10	ENSMUST00000033418.8	3712	11	36929	1986	36929	-1986	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTGTGAGGAAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	35412691	35432926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_35412765_35415670_35415768_35419195_35419281_35432466
ENSMUSG00000017132.18_118055641_118056498_1	chr11	-	451	2	ISM	ENSMUSG00000017132.18	ENST00000361101.8	2608	13	28023	640	28023	-640	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGTGGCAGGCGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	118056498	118055640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118055974_118056380
ENSMUSG00000017132.18_118055822_118056684_1	chr11	-	452	2	NNC	ENSMUSG00000017132.18	novel	2608	13	NA	NA	27837	-821	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCTTTTTGTCCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	118056684	118055821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_118055970_118056380
ENSMUSG00000017132.18_118055871_118059997_1	chr11	-	799	3	ISM	ENSMUSG00000017132.18	ENST00000361101.8	2608	13	24524	870	24524	-870	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	751	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGGGGCCTTTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	118059997	118055870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118055974_118056380_118056921_118059841
ENSMUSG00000017132.18_118056380_118061723_1	chr11	-	768	3	ISM	ENSMUSG00000017132.18	ENST00000361101.8	2608	13	22798	1379	22798	-1379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTGCCCTCCTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	118061723	118056379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118056921_118059841_118059997_118061651
ENSMUSG00000017132.18_118056633_118073643_1	chr11	-	760	6	ISM	ENSMUSG00000017132.18	ENSMUST00000106302.9	3119	13	29925	1641	10878	-1632	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCTGGAGTCGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	118073643	118056632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045_118068125_118073044_118073158_118073590
ENSMUSG00000017132.18_118056759_118068109_1	chr11	-	453	4	ISM	ENSMUSG00000017132.18	ENST00000361101.8	2608	13	16412	1758	16412	-1758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAGAGGGCTTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	118068109	118056758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045
ENSMUSG00000017132.18_118056772_118074741_1	chr11	-	751	7	ISM	ENSMUSG00000017132.18	ENSMUST00000106302.9	3119	13	28827	1780	9780	-1771	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAGCAGAGGAGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	118074741	118056771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045_118068125_118073044_118073158_118073590_118073740_118074707
ENSMUSG00000017132.18_118056844_118074779_1	chr11	-	717	7	ISM	ENSMUSG00000017132.18	ENSMUST00000106302.9	3119	13	28789	1852	9742	-1843	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGGCACCAGGGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	118074779	118056843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045_118068125_118073044_118073158_118073590_118073740_118074707
ENSMUSG00000017132.18_118059841_118075878_1	chr11	-	763	7	ISM	ENSMUSG00000017132.18	ENSMUST00000106302.9	3119	13	27690	4849	8643	-4840	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGGCTCCCTCCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	118075878	118059840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118059997_118061651_118061724_118068045_118068125_118073044_118073158_118073590_118073740_118074707_118074821_118075797
ENSMUSG00000017132.18_118059943_118076266_1	chr11	-	721	8	ISM	ENSMUSG00000017132.18	ENSMUST00000106302.9	3119	13	27302	4951	8255	-4942	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGAGGCGGACGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	118076266	118059942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118059997_118061651_118061724_118068045_118068125_118073044_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206
ENSMUSG00000017132.18_118068045_118083287_1	chr11	-	787	8	ISM	ENSMUSG00000017132.18	ENSMUST00000106302.9	3119	13	20281	13053	1234	-13044	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATCTACTGGGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	118083287	118068044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118068125_118073044_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222
ENSMUSG00000017132.18_118073076_118084498_1	chr11	-	734	8	ISM	ENSMUSG00000017132.18	ENST00000361101.8	2608	13	23	18075	23	-18075	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACCGAGAGGGCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	118084498	118073075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440
ENSMUSG00000017132.18_118074734_118084469_1	chr11	-	448	6	ISM	ENSMUSG00000017132.18	ENST00000361101.8	2608	13	52	19733	52	-19733	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATACTGGGGTGTTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	118084469	118074733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440
ENSMUSG00000017144.9_51021424_51024132_1	chr2	-	1172	2	ISM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	14991	974	14990	423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACGAGAAGTCAAATAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	51024132	51021423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_51022558_51024094
ENSMUSG00000017144.9_51021563_51027172_1	chr2	-	1155	3	ISM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	11951	1113	11950	284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTATTCTGTCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	51027172	51021562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_51022558_51024094_51024230_51027147
ENSMUSG00000017144.9_51021622_51027235_1	chr2	-	1159	3	ISM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	11888	1172	11887	225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAAGATGCATAGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	51027235	51021621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_51022558_51024094_51024230_51027147
ENSMUSG00000017144.9_51021847_51038945_1	chr2	-	1253	5	FSM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	178	1397	177	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATATATATTAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	51038945	51021846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_51022558_51024094_51024230_51027147_51027258_51038235_51038324_51038736
ENSMUSG00000017176.18_100320603_100327068_1	chr11	-	514	4	FSM	ENSMUSG00000017176.18	ENST00000521789.5	513	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGCCCACAAAGCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	100327068	100320602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100320776_100323743_100323907_100325520_100325611_100326980
ENSMUSG00000017176.18_100320603_100327068_2	chr11	-	508	4	NNC	ENSMUSG00000017176.18	novel	513	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGCCCACAAAGCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	100327068	100320602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_100320770_100323743_100323907_100325520_100325611_100326980
ENSMUSG00000017176.18_100320603_100331753_1	chr11	-	929	8	FSM	ENSMUSG00000017176.18	ENSMUST00000107397.2	1348	8	1	418	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGCCCACAAAGCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	100331753	100320602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654
ENSMUSG00000017176.18_100320708_100331899_1	chr11	-	854	9	FSM	ENSMUSG00000017176.18	ENSMUST00000092688.12	1399	9	16	529	16	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTTAATGGGTTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	100331899	100320707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654_100331754_100331869
ENSMUSG00000017188.4_101169164_101169631_1	chr11	-	207	2	FSM	ENSMUSG00000017188.4	ENSMUST00000017332.4	886	2	309	370	138	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGACCATCTTCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	101169631	101169163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101169279_101169539
ENSMUSG00000017210.15_98595726_98601279_1	chr11	-	1440	10	ISM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	18471	25	18471	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTCCGTGTGGCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	98601279	98595725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100
ENSMUSG00000017210.15_98595943_98602126_1	chr11	-	1446	11	ISM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	17624	242	17624	-217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTCCCAGGGGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	98602126	98595942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088
ENSMUSG00000017210.15_98596064_98603396_1	chr11	-	1363	12	ISM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	16354	363	16354	-338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTCACGCACCGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	98603396	98596063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358
ENSMUSG00000017210.15_98596348_98603501_1	chr11	-	1438	11	ISM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	16249	647	16249	-622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTTCCCGCTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	98603501	98596347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358
ENSMUSG00000017210.15_98597253_98604085_1	chr11	-	1415	11	ISM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	15665	1552	15665	-1527	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTGAGCTCCAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	98604085	98597252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979
ENSMUSG00000017210.15_98597651_98604945_1	chr11	-	1451	11	ISM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	14805	1950	14805	-1925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCTGCTGCTGGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	98604945	98597650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858
ENSMUSG00000017210.15_98597944_98605310_1	chr11	-	1442	11	ISM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	14440	2243	14440	-2218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGTTCTCTCCAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	98605310	98597943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227
ENSMUSG00000017210.15_98598092_98606581_1	chr11	-	1456	13	ISM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	13169	2391	13169	-2366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGCGGTCCAGCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	98606581	98598091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467
ENSMUSG00000017210.15_98598362_98606581_1	chr11	-	1423	12	ISM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	13169	2661	13169	-2636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGGCTGGGTGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	98606581	98598361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467
ENSMUSG00000017210.15_98598471_98607015_1	chr11	-	1373	13	ISM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	12735	2770	12735	-2745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCCAAGGTACTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	98607015	98598470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956
ENSMUSG00000017210.15_98598593_98607265_1	chr11	-	1369	14	ISM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	12485	2892	12485	-2867	internal_fragment	TRUE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGGACGTGCTCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	98607265	98598592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239
ENSMUSG00000017210.15_98600472_98608764_1	chr11	-	1385	14	ISM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	10986	4771	10986	-4746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATCCGCCAGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	98608764	98600471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735
ENSMUSG00000017210.15_98600472_98608793_1	chr11	-	1414	14	ISM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	10957	4771	10957	-4746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATCCGCCAGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	98608793	98600471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735
ENSMUSG00000017210.15_98600472_98608884_1	chr11	-	1505	14	ISM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	10866	4771	10866	-4746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATCCGCCAGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	98608884	98600471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735
ENSMUSG00000017210.15_98601101_98609396_1	chr11	-	1451	13	ISM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	10354	5400	10354	-5375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGGTTTAGGTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	98609396	98601100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322
ENSMUSG00000017210.15_98601226_98619480_1	chr11	-	1366	14	ISM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	270	5525	270	-5500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGACCTGCATGCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	98619480	98601225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98619440
ENSMUSG00000017210.15_98601597_98619660_1	chr11	-	1407	14	ISM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	90	5896	90	-5871	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATGAGTGCTGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	98619660	98601596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98619440_98619524_98619610
ENSMUSG00000017221.15_98573417_98581758_1	chr11	+	1021	6	ISM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	37	5047	37	-5047	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGGAGTACTCTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	98573416	98581758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741
ENSMUSG00000017221.15_98573520_98581811_1	chr11	+	971	6	ISM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	140	4994	140	-4994	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACAGCACACAGCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	98573519	98581811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741
ENSMUSG00000017221.15_98573590_98581845_1	chr11	+	935	6	ISM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	210	4960	210	-4960	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCATGGTTACCATGT	NA	NA	NA	NA	NA	NA	NA	NA	98573589	98581845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741
ENSMUSG00000017221.15_98573747_98584524_1	chr11	+	1013	8	ISM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	367	2281	367	-2281	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGATTTGGGTCTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	98573746	98584524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404
ENSMUSG00000017221.15_98576398_98584686_1	chr11	+	962	8	ISM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	3018	2119	3018	-2119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCAGCTGGATAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	98576397	98584686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630
ENSMUSG00000017221.15_98576461_98585012_1	chr11	+	996	9	ISM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	3081	1793	3081	-1793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTCCAATCCAAAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	98576460	98585012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963
ENSMUSG00000017221.15_98576760_98585119_1	chr11	+	1065	8	ISM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	3380	1686	3380	-1686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCACCCTCGGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	98576759	98585119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963
ENSMUSG00000017221.15_98578505_98586374_1	chr11	+	1003	9	ISM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	5125	431	5125	-431	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGTTTGCCAAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	98578504	98586374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
ENSMUSG00000017221.15_98578613_98586485_1	chr11	+	1006	9	ISM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	5233	320	5233	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCTGCCCGGGAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	98578612	98586485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
ENSMUSG00000017221.15_98581779_98586700_1	chr11	+	965	7	ISM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	8399	105	8399	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGATTAGGGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	98581778	98586700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
ENSMUSG00000017221.15_98584208_98586805_1	chr11	+	1004	6	ISM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	10828	0	10828	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGCACGGTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	98584207	98586805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
ENSMUSG00000017264.17_148642919_148649717_1	chr4	+	1152	10	ISM	ENSMUSG00000017264.17	ENSMUST00000076022.7	2682	24	0	17141	0	-17141	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGAACATGTTTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	148642918	148649717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660
ENSMUSG00000017264.17_148644003_148649851_1	chr4	+	1171	9	ISM	ENSMUSG00000017264.17	ENSMUST00000076022.7	2682	24	1084	17007	1084	-17007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTTCAGTCTGCCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	148644002	148649851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660
ENSMUSG00000017264.17_148645469_148650892_1	chr4	+	1190	9	ISM	ENSMUSG00000017264.17	ENSMUST00000076022.7	2682	24	2550	15966	2550	-15966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCGTGTCATCAGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	148645468	148650892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735
ENSMUSG00000017264.17_148646853_148652957_1	chr4	+	1110	9	ISM	ENSMUSG00000017264.17	ENSMUST00000076022.7	2682	24	3934	13901	3934	-13901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGAGAGCTACGGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	148646852	148652957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823
ENSMUSG00000017264.17_148647532_148657599_1	chr4	+	1135	11	ISM	ENSMUSG00000017264.17	ENSMUST00000076022.7	2682	24	4613	9259	4613	-9259	internal_fragment	TRUE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCCCACGCCCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	148647531	148657599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567
ENSMUSG00000017264.17_148648565_148657841_1	chr4	+	1157	10	ISM	ENSMUSG00000017264.17	ENSMUST00000076022.7	2682	24	5646	9017	5646	-9017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTAACAAGGAAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	148648564	148657841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734
ENSMUSG00000017264.17_148649138_148660650_1	chr4	+	1100	11	ISM	ENSMUSG00000017264.17	ENSMUST00000017408.14	2790	25	6252	6208	6219	-6208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTGATCCTTCTTCGA	NA	NA	NA	NA	NA	NA	NA	NA	148649137	148660650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606
ENSMUSG00000017264.17_148649764_148663882_1	chr4	+	1098	12	ISM	ENSMUSG00000017264.17	ENSMUST00000017408.14	2790	25	6878	2976	6845	-2976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGCTATCCCTGTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	148649763	148663882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837
ENSMUSG00000017264.17_148650814_148664973_1	chr4	+	1122	12	ISM	ENSMUSG00000017264.17	ENSMUST00000017408.14	2790	25	7928	1885	7895	-1885	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCCTTTGCTGGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	148650813	148664973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815
ENSMUSG00000017264.17_148652872_148666259_1	chr4	+	1116	13	ISM	ENSMUSG00000017264.17	ENSMUST00000017408.14	2790	25	9986	599	9953	-599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGTCATTTGCTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	148652871	148666259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214
ENSMUSG00000017264.17_148654844_148666858_1	chr4	+	1114	12	ISM	ENSMUSG00000017264.17	ENSMUST00000017408.14	2790	25	11958	0	11925	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	148654843	148666858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ENSMUSG00000017286.16_76112433_76130399_1	chr11	-	1111	7	NNC	ENSMUSG00000017286.16	novel	1434	9	NA	NA	3886	-97	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTTTAATCCCAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	76130399	76112432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124807_76125214_76125352_76128494_76128640_76130277
ENSMUSG00000017286.16_76112433_76131748_1	chr11	-	1166	8	ISM	ENSMUSG00000017286.16	ENSMUST00000170710.8	1445	9	2537	-187	2537	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTTTAATCCCAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	76131748	76112432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698
ENSMUSG00000017286.16_76112433_76131750_1	chr11	-	1163	8	NNC	ENSMUSG00000017286.16	novel	1434	9	NA	NA	2535	-97	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTTTAATCCCAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	76131750	76112432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128499_76128640_76130277_76130399_76131698
ENSMUSG00000017286.16_76112620_76134469_1	chr11	-	1062	9	NNC	ENSMUSG00000017286.16	novel	1434	9	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGCAAATTCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	76134469	76112619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124807_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ENSMUSG00000017286.16_76112620_76134469_2	chr11	-	1068	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	82	284	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGCAAATTCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	76134469	76112619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ENSMUSG00000017286.16_76112620_76134469_3	chr11	-	1061	9	NNC	ENSMUSG00000017286.16	novel	1434	9	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGCAAATTCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	76134469	76112619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_76112858_76123847_76123935_76124027_76124135_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ENSMUSG00000017286.16_76130277_76134680_1	chr11	-	472	3	ISM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	-129	17941	-129	-17505	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATATCACTCTGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	76134680	76130276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_76130399_76131698_76131749_76134380
ENSMUSG00000017286.16_76130324_76134736_1	chr11	-	481	3	ISM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	-185	17988	-185	-17552	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAATTATGGCATCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	76134736	76130323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_76130399_76131698_76131749_76134380
ENSMUSG00000017286.16_76130380_76134786_1	chr11	-	475	3	ISM	ENSMUSG00000017286.16	ENST00000536578.5	1619	10	581	17608	-235	-17608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAACAATGGTGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	76134786	76130379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_76130399_76131698_76131749_76134380
ENSMUSG00000017288.16_75937284_75957608_1	chr11	-	480	5	ISM	ENSMUSG00000017288.16	ENSMUST00000094015.11	2645	21	112835	161	112734	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCGAATCCGCAAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	75957608	75937283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75937409_75937890_75937996_75939265_75939404_75953810_75953881_75957566
ENSMUSG00000017288.16_75937311_75957697_1	chr11	-	542	5	ISM	ENSMUSG00000017288.16	ENSMUST00000094015.11	2645	21	112746	188	112645	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCCCCAACACCGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	75957697	75937310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75937409_75937890_75937996_75939265_75939404_75953810_75953881_75957566
ENSMUSG00000017288.16_75939341_75972026_1	chr11	-	498	6	ISM	ENSMUSG00000017288.16	ENSMUST00000094015.11	2645	21	98417	2218	98316	-2218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGAGGAAGGCCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	75972026	75939340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75939404_75953810_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972
ENSMUSG00000017288.16_75953806_76070342_1	chr11	-	1900	16	NNC	ENSMUSG00000017288.16	novel	1900	16	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTTTGTATGGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	76070342	75953805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027134_76065448_76065534_76070238
ENSMUSG00000017288.16_75953806_76070342_2	chr11	-	1897	16	NNC	ENSMUSG00000017288.16	novel	1900	16	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTTTGTATGGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	76070342	75953805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972115_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76065452_76065534_76070238
ENSMUSG00000017288.16_75953806_76070342_3	chr11	-	1898	16	NNC	ENSMUSG00000017288.16	novel	1900	16	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTTTGTATGGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	76070342	75953805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004904_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76065452_76065534_76070238
ENSMUSG00000017288.16_75953806_76070342_4	chr11	-	1902	16	NNC	ENSMUSG00000017288.16	novel	1900	16	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1022	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTTTGTATGGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	76070342	75953805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76065452_76065534_76070239
ENSMUSG00000017288.16_75953806_76070342_5	chr11	-	1897	16	NNC	ENSMUSG00000017288.16	novel	1900	16	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTTTGTATGGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	76070342	75953805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983136_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76065452_76065534_76070238
ENSMUSG00000017288.16_75953806_76070342_6	chr11	-	1903	16	FSM	ENSMUSG00000017288.16	ENST00000680128.1	1900	16	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTTTGTATGGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	76070342	75953805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76065452_76065534_76070238
ENSMUSG00000017291.14_77427518_77464637_1	chr11	-	3290	12	ISM	ENSMUSG00000017291.14	ENST00000536202.1	3830	17	11686	0	11686	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTACCTTATGAATTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	77464637	77427517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_77429155_77430879_77431063_77432450_77432664_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521
ENSMUSG00000017291.14_77427763_77469655_1	chr11	-	3290	15	ISM	ENSMUSG00000017291.14	ENST00000536202.1	3830	17	6668	245	6668	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGATGCCATATTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	77469655	77427762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_77429155_77430879_77431063_77432450_77432664_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551
ENSMUSG00000017291.14_77427972_77476162_1	chr11	-	3215	17	FSM	ENSMUSG00000017291.14	ENST00000536202.1	3830	17	161	454	161	-454	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAACTAGAGGGCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	77476162	77427971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_77429155_77430879_77431063_77432450_77432664_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098
ENSMUSG00000017291.14_77428029_77476207_1	chr11	-	3203	17	FSM	ENSMUSG00000017291.14	ENST00000536202.1	3830	17	116	511	116	-511	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAGATCATAAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	77476207	77428028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_77429155_77430879_77431063_77432450_77432664_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098
ENSMUSG00000017291.14_77428086_77476332_1	chr11	-	3271	17	FSM	ENSMUSG00000017291.14	ENST00000536202.1	3830	17	-9	568	0	-568	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTCAGAATTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	77476332	77428085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_77429155_77430879_77431063_77432450_77432664_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098
ENSMUSG00000017300.10_164619219_164619520_1	chr2	-	164	2	ISM	ENSMUSG00000017300.10	ENSMUST00000103095.5	700	6	2141	138	2141	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGTCTTTGTTCGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	164619520	164619218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164619254_164619391
ENSMUSG00000017300.10_164619428_164619736_1	chr2	-	187	2	ISM	ENSMUSG00000017300.10	ENSMUST00000103095.5	700	6	1925	347	1925	-347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATAAAAACAACGACGGC	NA	NA	NA	NA	NA	NA	NA	NA	164619736	164619427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164619529_164619650
ENSMUSG00000017300.10_164619505_164619895_1	chr2	-	171	3	ISM	ENSMUSG00000017300.10	ENSMUST00000103095.5	700	6	1766	424	1766	-424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGCTAGCTGAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	164619895	164619504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164619529_164619650_164619766_164619863
ENSMUSG00000017300.10_164619687_164619965_1	chr2	-	181	2	ISM	ENSMUSG00000017300.10	ENSMUST00000103095.5	700	6	1696	606	1696	-606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAACTGGCTGAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	164619965	164619686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164619766_164619863
ENSMUSG00000017300.10_164619740_164620013_1	chr2	-	176	2	ISM	ENSMUSG00000017300.10	ENSMUST00000103095.5	700	6	1648	659	1648	-659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTCATGATGGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	164620013	164619739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164619766_164619863
ENSMUSG00000017300.10_164619864_164620148_1	chr2	-	197	2	ISM	ENSMUSG00000017300.10	ENSMUST00000103095.5	700	6	1513	783	1513	-783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGGGCTCCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	164620148	164619863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164620008_164620095
ENSMUSG00000017386.11_78050226_78056342_1	chr11	-	1515	8	FSM	ENSMUSG00000017386.11	ENST00000444415.7	1459	8	-8	-48	-8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCTGTCTCCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	78056342	78050225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_78050510_78050999_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207_78053260_78056123
ENSMUSG00000017386.11_78050739_78052144_1	chr11	-	161	2	ISM	ENSMUSG00000017386.11	ENST00000262396.10	618	5	4150	-1	4150	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTTTGGCTTCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	78052144	78050738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78050868_78052112
ENSMUSG00000017386.11_78050783_78052202_1	chr11	-	175	2	ISM	ENSMUSG00000017386.11	ENST00000262396.10	618	5	4092	43	4092	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTGCCTCTGTCGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	78052202	78050782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78050868_78052112
ENSMUSG00000017386.11_78050841_78052251_1	chr11	-	166	2	ISM	ENSMUSG00000017386.11	ENST00000262396.10	618	5	4043	101	4043	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTCCCACCAGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	78052251	78050840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78050868_78052112
ENSMUSG00000017390.16_78213994_78216643_1	chr11	+	890	7	ISM	ENSMUSG00000017390.16	ENST00000395321.6	1493	9	84	764	84	-764	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAACTGCTCCTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	78213993	78216643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78214049_78215192_78215340_78215429_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467
ENSMUSG00000017390.16_78215152_78216798_1	chr11	+	913	7	ISM	ENSMUSG00000017390.16	ENSMUST00000102478.4	1700	8	126	788	126	-609	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTCTCAACCTCAATGC	NA	NA	NA	NA	NA	NA	NA	NA	78215151	78216798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78215340_78215429_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78216760
ENSMUSG00000017390.16_78215266_78216844_1	chr11	+	845	7	ISM	ENSMUSG00000017390.16	ENSMUST00000102478.4	1700	8	240	742	240	-563	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCCTCACCTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	78215265	78216844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78215340_78215429_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78216760
ENSMUSG00000017390.16_78215306_78216944_1	chr11	+	905	7	ISM	ENSMUSG00000017390.16	ENSMUST00000102478.4	1700	8	280	642	280	-463	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAGCGGGCAGAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	78215305	78216944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78215340_78215429_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78216760
ENSMUSG00000017390.16_78215464_78217108_1	chr11	+	874	7	ISM	ENSMUSG00000017390.16	ENSMUST00000102478.4	1700	8	438	478	438	-299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGATATGAAGGCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	78215463	78217108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78216760_78216961_78217087
ENSMUSG00000017390.16_78215544_78217159_1	chr11	+	845	7	ISM	ENSMUSG00000017390.16	ENSMUST00000102478.4	1700	8	518	427	518	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGCCAACCATGCCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	78215543	78217159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78216760_78216961_78217087
ENSMUSG00000017390.16_78215608_78217216_1	chr11	+	838	7	ISM	ENSMUSG00000017390.16	ENSMUST00000102478.4	1700	8	582	370	582	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACATCCCATTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	78215607	78217216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78216760_78216961_78217087
ENSMUSG00000017390.16_78215891_78217409_1	chr11	+	926	5	ISM	ENSMUSG00000017390.16	ENSMUST00000102478.4	1700	8	865	177	865	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGACCTTTTTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	78215890	78217409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78216036_78216154_78216239_78216467_78216643_78216760_78216961_78217087
ENSMUSG00000017400.11_97927903_97930487_1	chr11	-	1037	2	ISM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	13801	454	13801	-454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATACCTTGGCAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	97930487	97927902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97928897_97930444
ENSMUSG00000017400.11_97928027_97931285_1	chr11	-	1098	4	ISM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	13003	578	13003	-578	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACCAGAAGCAGACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	97931285	97928026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247
ENSMUSG00000017400.11_97928361_97932386_1	chr11	-	1053	7	ISM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	11902	912	11902	-912	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTAGCCCTCCCCTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	97932386	97928360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292
ENSMUSG00000017400.11_97928562_97933657_1	chr11	-	1037	9	ISM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	10631	1113	10631	-1113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAGGACCACCCGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	97933657	97928561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582
ENSMUSG00000017400.11_97928669_97934417_1	chr11	-	1065	10	ISM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	9871	1220	9871	-1220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCACTTAGGAGCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	97934417	97928668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305
ENSMUSG00000017400.11_97928740_97934472_1	chr11	-	1049	10	ISM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	9816	1291	9816	-1291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCTGAGAAGGAAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	97934472	97928739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305
ENSMUSG00000017400.11_97928812_97934543_1	chr11	-	1048	10	ISM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	9745	1363	9745	-1363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTTGGCAGAGATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	97934543	97928811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305
ENSMUSG00000017400.11_97930517_97943788_1	chr11	-	1030	10	ISM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	500	3068	500	-3068	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGGCGATGCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	97943788	97930516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718
ENSMUSG00000017400.11_97931326_97944018_1	chr11	-	1064	8	ISM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	270	3877	270	-3877	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGACGTGGGGCCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	97944018	97931325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718
ENSMUSG00000017400.11_97932336_97944288_1	chr11	-	1136	5	ISM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	0	4887	0	-4887	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGCTTCAGCAGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	97944288	97932335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718
ENSMUSG00000017400.11_97932389_97944288_1	chr11	-	1083	5	ISM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	0	4940	0	-4940	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGTTTATGAGACGCT	NA	NA	NA	NA	NA	NA	NA	NA	97944288	97932388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718
ENSMUSG00000017404.13_97917750_97921318_1	chr11	+	746	6	NNC	ENSMUSG00000017404.13	novel	751	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGCTGCTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	97917749	97921318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_97917817_97918648_97918756_97919176_97919295_97920220_97920342_97920600_97920712_97921096
ENSMUSG00000017404.13_97917750_97921318_2	chr11	+	744	6	NNC	ENSMUSG00000017404.13	novel	751	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGCTGCTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	97917749	97921318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_97917817_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921103
ENSMUSG00000017404.13_97917750_97921319_1	chr11	+	747	6	NNC	ENSMUSG00000017404.13	novel	751	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGCTGCTGTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	97917749	97921319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_97917817_97918648_97918756_97919171_97919295_97920225_97920342_97920600_97920712_97921096
ENSMUSG00000017404.13_97918647_97921319_1	chr11	+	679	5	NNC	ENSMUSG00000017404.13	novel	737	6	NA	NA	897	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGCTGCTGTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	97918646	97921319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_97918756_97919179_97919295_97920220_97920342_97920600_97920712_97921096
ENSMUSG00000017405.15_78056932_78058980_1	chr11	-	1217	5	ISM	ENSMUSG00000017405.15	ENSMUST00000017549.13	2809	15	8521	0	8521	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	78058980	78056931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917
ENSMUSG00000017405.15_78057194_78059881_1	chr11	-	1127	6	ISM	ENSMUSG00000017405.15	ENSMUST00000017549.13	2809	15	7620	262	7620	-262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGCAGCTGATAGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	78059881	78057193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797
ENSMUSG00000017405.15_78057538_78061507_1	chr11	-	1114	9	ISM	ENSMUSG00000017405.15	ENSMUST00000017549.13	2809	15	5994	606	5994	-606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAAATGCAGGTGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	78061507	78057537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438
ENSMUSG00000017405.15_78058374_78062052_1	chr11	-	1134	9	ISM	ENSMUSG00000017405.15	ENSMUST00000017549.13	2809	15	5449	1442	5449	-1442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCTGTCGGGTCCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	78062052	78058373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061915
ENSMUSG00000017405.15_78060223_78063841_1	chr11	-	1130	8	ISM	ENSMUSG00000017405.15	ENSMUST00000017549.13	2809	15	3660	3291	3660	-3291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCAACCTGACTGACATCA	NA	NA	NA	NA	NA	NA	NA	NA	78063841	78060222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061915_78062125_78062936_78063069_78063276_78063510_78063750
ENSMUSG00000017405.15_78061261_78063956_1	chr11	-	1136	7	ISM	ENSMUSG00000017405.15	ENSMUST00000017549.13	2809	15	3545	4329	3545	-4329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGTGACCATCAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	78063956	78061260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78061355_78061438_78061621_78061698_78061779_78061915_78062125_78062936_78063069_78063276_78063510_78063750
ENSMUSG00000017412.16_52323224_52327018_1	chr2	-	1657	2	NNC	ENSMUSG00000017412.16	novel	1782	9	NA	NA	119647	-513	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAGTGAACAGCCTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	52327018	52323223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_52324760_52326897
ENSMUSG00000017412.16_52323580_52345706_1	chr2	-	1711	5	ISM	ENSMUSG00000017412.16	ENST00000439467.6	2169	14	100959	-491	100959	491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCGGGATACTGCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	52345706	52323579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52324762_52326897_52327084_52339961_52340058_52341880_52342033_52345611
ENSMUSG00000017412.16_52323873_52357332_1	chr2	-	1670	9	ISM	ENSMUSG00000017412.16	ENST00000439467.6	2169	14	89333	-198	89333	198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCTCAGAAATCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	52357332	52323872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52324762_52326897_52327084_52339961_52340058_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255
ENSMUSG00000017412.16_52324120_52364999_1	chr2	-	1712	11	ISM	ENSMUSG00000017412.16	ENST00000637762.1	3668	14	83550	1409	81666	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTTGGAATTTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	52364999	52324119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52324762_52326897_52327084_52339961_52340058_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357366_52359488_52359620_52364874
ENSMUSG00000017412.16_52324161_52364921_1	chr2	-	1464	10	ISM	ENSMUSG00000017412.16	ENST00000397327.7	2139	13	83637	41	81744	12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATGACCAGTTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	52364921	52324160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52324762_52326897_52327084_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357333_52359488_52359620_52364874
ENSMUSG00000017412.16_52324214_52364960_1	chr2	-	1430	9	NIC	ENSMUSG00000017412.16	novel	7872	13	NA	NA	81705	-7	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTAGGGTACTTATCAA	NA	NA	NA	NA	NA	NA	NA	NA	52364960	52324213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_52324762_52326897_52327084_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52357255_52357333_52359488_52359620_52364874
ENSMUSG00000017412.16_52324226_52364960_1	chr2	-	1438	10	ISM	ENSMUSG00000017412.16	ENST00000397327.7	2139	13	83598	106	81705	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATCAATTTGTAATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	52364960	52324225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52324762_52326897_52327084_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357333_52359488_52359620_52364874
ENSMUSG00000017412.16_52324256_52367791_1	chr2	-	1662	12	ISM	ENSMUSG00000017412.16	ENST00000637762.1	3668	14	80758	1545	78874	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTTTTGTTTTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	52367791	52324255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52324762_52326897_52327084_52339961_52340058_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357366_52359488_52359620_52364874_52364998_52367703
ENSMUSG00000017412.16_52324292_52364996_1	chr2	-	1408	10	ISM	ENSMUSG00000017412.16	ENST00000397327.7	2139	13	83562	172	81669	-85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATTTTTAAGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	52364996	52324291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52324762_52326897_52327084_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357333_52359488_52359620_52364874
ENSMUSG00000017412.16_52324456_52446373_1	chr2	-	1525	12	ISM	ENSMUSG00000017412.16	ENST00000397327.7	2139	13	2185	336	292	-249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAATTTGCCATAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	52446373	52324455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52324762_52326897_52327084_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357333_52359488_52359620_52364874_52364998_52367703_52367824_52446213
ENSMUSG00000017412.16_52324530_52448385_1	chr2	-	1685	14	FSM	ENSMUSG00000017412.16	ENST00000637762.1	3668	14	164	1819	164	-323	multi-exon	FALSE	canonical	NA	NA	NA	NA	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCCATGACTCCCGACAT	NA	NA	NA	NA	NA	NA	NA	NA	52448385	52324529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_52324762_52326897_52327084_52339961_52340058_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357366_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52448280
ENSMUSG00000017412.16_52324555_52448404_1	chr2	-	1659	13	NIC	ENSMUSG00000017412.16	novel	3668	14	NA	NA	145	-348	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACCGAGGATCGCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	52448404	52324554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_52324762_52326897_52327084_52339961_52340058_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52357255_52357366_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52448280
ENSMUSG00000017412.16_52324589_52448351_1	chr2	-	1463	13	FSM	ENSMUSG00000017412.16	ENST00000397327.7	2139	13	207	469	198	-382	multi-exon	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGGACTCGTACCAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	52448351	52324588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_52324762_52326897_52327084_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357333_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52448280
ENSMUSG00000017412.16_52324597_52448437_1	chr2	-	1670	14	FSM	ENSMUSG00000017412.16	ENST00000637762.1	3668	14	112	1886	112	-390	multi-exon	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTACCCGGACTCGTA	NA	NA	NA	NA	NA	NA	NA	NA	52448437	52324596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_52324762_52326897_52327084_52339961_52340058_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357366_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52448280
ENSMUSG00000017412.16_52324605_52448354_1	chr2	-	1430	12	NIC	ENSMUSG00000017412.16	novel	2139	13	NA	NA	195	-398	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGGAAGAAGATTACCCG	NA	NA	NA	NA	NA	NA	NA	NA	52448354	52324604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_52324762_52326897_52327084_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52357255_52357333_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52448280
ENSMUSG00000017412.16_52324654_52448572_1	chr2	-	1748	14	FSM	ENSMUSG00000017412.16	ENST00000637762.1	3668	14	-23	1943	0	-447	multi-exon	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACCGCTTGTCTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	52448572	52324653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_52324762_52326897_52327084_52339961_52340058_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357366_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52448280
ENSMUSG00000017412.16_52324655_52448392_1	chr2	-	1438	13	FSM	ENSMUSG00000017412.16	ENST00000397327.7	2139	13	166	535	157	-448	multi-exon	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAACCGCTTGTCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	52448392	52324654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_52324762_52326897_52327084_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357333_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52448280
ENSMUSG00000017412.16_52324662_52448398_1	chr2	-	1417	12	NIC	ENSMUSG00000017412.16	novel	2139	13	NA	NA	151	-455	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGAGTAGGAACCGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	52448398	52324661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_52324762_52326897_52327084_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52357255_52357333_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52448280
ENSMUSG00000017412.16_52324682_52355665_1	chr2	-	570	5	ISM	ENSMUSG00000017412.16	ENST00000637779.1	1794	10	92884	479	91000	-475	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCACAATGAGAGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	52355665	52324681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52324762_52326897_52327084_52339961_52340058_52341880_52342033_52355609
ENSMUSG00000017412.16_52324703_52448445_1	chr2	-	1443	13	FSM	ENSMUSG00000017412.16	ENST00000397327.7	2139	13	113	583	104	-496	multi-exon	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATGACCTCGGATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	52448445	52324702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_52324762_52326897_52327084_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357333_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52448280
ENSMUSG00000017412.16_52324716_52448450_1	chr2	-	1415	12	NIC	ENSMUSG00000017412.16	novel	2139	13	NA	NA	99	-509	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAGACGAAGCCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	52448450	52324715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_52324762_52326897_52327084_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52357255_52357333_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52448280
ENSMUSG00000017412.16_52326898_52448572_1	chr2	-	1511	12	ISM	ENSMUSG00000017412.16	ENST00000397327.7	2139	13	-14	2778	0	-2691	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTACTTATTTCCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	52448572	52326897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52327084_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357333_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52448280
ENSMUSG00000017412.16_52326898_52448572_2	chr2	-	1491	11	NIC	ENSMUSG00000017412.16	novel	2139	13	NA	NA	0	-2691	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTACTTATTTCCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	52448572	52326897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_52327084_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52357255_52357333_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52448280
ENSMUSG00000017412.16_52326948_52359515_1	chr2	-	569	6	ISM	ENSMUSG00000017412.16	ENST00000637779.1	1794	10	89034	2745	87150	-2741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTCCACAGCCCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	52359515	52326947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52327084_52339961_52340058_52341880_52342033_52355609_52355691_52357255_52357333_52359488
ENSMUSG00000017412.16_52327002_52359565_1	chr2	-	565	6	ISM	ENSMUSG00000017412.16	ENST00000637779.1	1794	10	88984	2799	87100	-2795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCACCCACACGAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	52359565	52327001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52327084_52339961_52340058_52341880_52342033_52355609_52355691_52357255_52357333_52359488
ENSMUSG00000017412.16_52327012_52359541_1	chr2	-	354	4	ISM	ENSMUSG00000017412.16	ENST00000636380.1	1782	9	89017	2805	87124	-2805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATACTGGCGTGCCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	52359541	52327011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52327084_52341880_52342033_52357255_52357333_52359488
ENSMUSG00000017412.16_52327051_52359617_1	chr2	-	568	6	ISM	ENSMUSG00000017412.16	ENST00000637779.1	1794	10	88932	2848	87048	-2844	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGGATGCCTGTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	52359617	52327050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52327084_52339961_52340058_52341880_52342033_52355609_52355691_52357255_52357333_52359488
ENSMUSG00000017412.16_52341958_52367783_1	chr2	-	567	6	ISM	ENSMUSG00000017412.16	ENST00000637779.1	1794	10	80766	17755	78882	-17751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCAACCACCCAGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	52367783	52341957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52342033_52355609_52355691_52357255_52357333_52359488_52359620_52364874_52364998_52367703
ENSMUSG00000017412.16_52341964_52364951_1	chr2	-	354	4	ISM	ENSMUSG00000017412.16	ENST00000636380.1	1782	9	83607	17757	81714	-17757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACACCATCAACCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	52364951	52341963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52342033_52357255_52357333_52359488_52359620_52364874
ENSMUSG00000017412.16_52355657_52448361_1	chr2	-	566	6	ISM	ENSMUSG00000017412.16	ENST00000637779.1	1794	10	188	31454	188	-31450	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCGTCCTGTGGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	52448361	52355656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52355691_52357255_52357333_52359488_52359620_52364874_52364998_52367703_52367824_52448280
ENSMUSG00000017421.19_80274105_80282705_1	chr11	+	891	8	ISM	ENSMUSG00000017421.19	ENSMUST00000108216.8	2152	9	-52	2404	0	-2404	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACAGGCTGTTTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	80274104	80282705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660
ENSMUSG00000017421.19_80274105_80287072_1	chr11	+	2307	11	NNC	ENSMUSG00000017421.19	novel	2311	11	NA	NA	0	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	1370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTTGATACATGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	80274104	80287072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286220
ENSMUSG00000017421.19_80274105_80287072_2	chr11	+	2306	11	NNC	ENSMUSG00000017421.19	novel	2311	11	NA	NA	0	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	1701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTTGATACATGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	80274104	80287072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_80274316_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ENSMUSG00000017421.19_80274105_80287072_3	chr11	+	2306	11	NNC	ENSMUSG00000017421.19	novel	2311	11	NA	NA	0	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	1742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTTGATACATGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	80274104	80287072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80282156_80282228_80282660_80282819_80283909_80284003_80285117_80285358_80285927_80286088_80286215
ENSMUSG00000017421.19_80274223_80282705_1	chr11	+	773	8	ISM	ENSMUSG00000017421.19	ENSMUST00000108216.8	2152	9	66	2404	0	-2404	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACAGGCTGTTTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	80274222	80282705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660
ENSMUSG00000017421.19_80274223_80282818_1	chr11	+	886	8	ISM	ENSMUSG00000017421.19	ENSMUST00000108216.8	2152	9	66	2291	0	-2291	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGTGAAATTCTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	80274222	80282818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660
ENSMUSG00000017421.19_80274223_80287072_1	chr11	+	2194	11	FSM	ENSMUSG00000017421.19	ENSMUST00000165565.8	2311	11	118	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTTGATACATGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	80274222	80287072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ENSMUSG00000017421.19_80276683_80285124_1	chr11	+	846	8	ISM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	2554	1950	2460	15	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGGACCTGTTGGTACA	NA	NA	NA	NA	NA	NA	NA	NA	80276682	80285124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111
ENSMUSG00000017421.19_80276807_80285165_1	chr11	+	763	8	ISM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	2678	1909	2584	56	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCTGCAGCAACAACTAC	NA	NA	NA	NA	NA	NA	NA	NA	80276806	80285165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111
ENSMUSG00000017421.19_80276839_80285234_1	chr11	+	800	8	ISM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	2710	1840	2616	125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCACTAGTACAACAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	80276838	80285234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111
ENSMUSG00000017421.19_80279802_80286031_1	chr11	+	873	7	ISM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	5673	1043	5579	-361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACAGCCAGGCCTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	80279801	80286031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927
ENSMUSG00000017421.19_80279957_80286087_1	chr11	+	774	7	ISM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	5828	987	5734	-305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTTTTTTTCCCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	80279956	80286087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927
ENSMUSG00000017421.19_80280110_80286279_1	chr11	+	794	7	ISM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	5981	795	5887	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGACCACCAATGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	80280109	80286279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ENSMUSG00000017421.19_80280599_80286392_1	chr11	+	861	6	ISM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	6470	682	6376	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGGTTTGGAGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	80280598	80286392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ENSMUSG00000017428.17_80329076_80347068_1	chr11	+	259	4	ISM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	9627	15667	9625	-15667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCTGCTTCGGGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	80329075	80347068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80329202_80336067_80336140_80336739_80336798_80347065
ENSMUSG00000017428.17_80347065_80351517_1	chr11	+	292	2	ISM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	27616	11218	27614	-11218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCACATCTCTGAAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	80347064	80351517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80347261_80351421
ENSMUSG00000017428.17_80351535_80360753_1	chr11	+	282	4	ISM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	32086	1982	32084	-1982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAACCTTCCTGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	80351534	80360753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80351567_80353436_80353498_80355839_80355903_80360627
ENSMUSG00000017428.17_80353441_80361503_1	chr11	+	334	5	ISM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	33992	1232	33990	-1232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAAAGGTCACGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	80353440	80361503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451
ENSMUSG00000017428.17_80355837_80362365_1	chr11	+	368	5	ISM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	36388	370	36386	-370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATGAGTAAAGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	80355836	80362365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277
ENSMUSG00000017428.17_80361209_80362570_1	chr11	+	266	4	ISM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	41758	1504	41758	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCGGGAGAGTGAACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	80361208	80362570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80361245_80361451_80361504_80362277_80362421_80362535
ENSMUSG00000017446.15_118327574_118339177_1	chr11	+	1143	4	FSM	ENSMUSG00000017446.15	ENST00000581774.5	1155	4	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACACTCCTGTGGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	118327573	118339177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_118327826_118334476_118334677_118337326_118337467_118338626
ENSMUSG00000017446.15_118327729_118339177_1	chr11	+	983	4	NNC	ENSMUSG00000017446.15	novel	1155	4	NA	NA	167	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACACTCCTGTGGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	118327728	118339177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_118327826_118334476_118334677_118337326_118337467_118338631
ENSMUSG00000017446.15_118327729_118339177_2	chr11	+	988	4	FSM	ENSMUSG00000017446.15	ENST00000581774.5	1155	4	167	0	167	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACACTCCTGTGGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	118327728	118339177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_118327826_118334476_118334677_118337326_118337467_118338626
ENSMUSG00000017446.15_118334539_118340492_1	chr11	+	2144	3	ISM	ENSMUSG00000017446.15	ENST00000581774.5	1155	4	6977	-1315	6977	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGAGCCTGTGTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	118334538	118340492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_118334677_118337326_118337467_118338626
ENSMUSG00000017446.15_118337365_118340684_1	chr11	+	2160	2	ISM	ENSMUSG00000017446.15	ENST00000581774.5	1155	4	9803	-1507	9803	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAAGCCACTTCCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	118337364	118340684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_118337467_118338626
ENSMUSG00000017466.10_118192783_118201529_1	chr11	-	2068	2	ISM	ENSMUSG00000017466.10	ENSMUST00000017610.10	3709	5	44803	888	44803	-888	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATATGTAACAGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	118201529	118192782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118194723_118201401
ENSMUSG00000017466.10_118192896_118208273_1	chr11	-	1981	3	ISM	ENSMUSG00000017466.10	ENSMUST00000017610.10	3709	5	38059	1001	38059	-1001	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGCATTTTCGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	118208273	118192895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118194723_118201401_118201527_118208244
ENSMUSG00000017466.10_118192954_118208323_1	chr11	-	1973	3	ISM	ENSMUSG00000017466.10	ENSMUST00000017610.10	3709	5	38009	1059	38009	-1059	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCCAGTCCTTTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	118208323	118192953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118194723_118201401_118201527_118208244
ENSMUSG00000017466.10_118193244_118245939_1	chr11	-	1967	5	FSM	ENSMUSG00000017466.10	ENSMUST00000017610.10	3709	5	393	1349	393	-1349	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGACAGGCAGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	118245939	118193243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_118194723_118201401_118201527_118208244_118208354_118210934_118211036_118245786
ENSMUSG00000017466.10_118193517_118246220_1	chr11	-	1975	5	FSM	ENSMUSG00000017466.10	ENSMUST00000017610.10	3709	5	112	1622	112	-1622	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACCCTGTTGATTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	118246220	118193516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_118194723_118201401_118201527_118208244_118208354_118210934_118211036_118245786
ENSMUSG00000017478.16_123125799_123140689_1	chr8	+	1578	11	ISM	ENSMUSG00000017478.16	ENSMUST00000093073.12	3705	18	22417	3410	22379	-3409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCTTGGAGGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	123125798	123140689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595
ENSMUSG00000017499.16_98810029_98812983_1	chr11	+	1386	3	ISM	ENSMUSG00000017499.16	ENSMUST00000093937.3	2559	12	11052	-264	11052	264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACCCTTAAATCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	98810028	98812983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98810232_98811498_98811640_98811941
ENSMUSG00000017548.16_79889922_79906074_1	chr11	+	321	5	FSM	ENSMUSG00000017548.16	ENST00000578070.5	416	5	42	53	42	-53	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAATAAGGCTTCAATAC	NA	NA	NA	NA	NA	NA	NA	NA	79889921	79906074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_79889952_79901383_79901470_79904189_79904224_79904356_79904422_79905968
ENSMUSG00000017548.16_79901381_79906127_1	chr11	+	331	3	NNC	ENSMUSG00000017548.16	novel	416	5	NA	NA	11501	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGATATTCCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	79901380	79906127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_79901488_79904356_79904422_79905968
ENSMUSG00000017561.17_79938456_79948725_1	chr11	-	462	4	ISM	ENSMUSG00000017561.17	ENSMUST00000061283.15	2396	8	23092	1137	23039	-1137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGAAGGTGGGAACGCC	NA	NA	NA	NA	NA	NA	NA	NA	79948725	79938455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617
ENSMUSG00000017561.17_79938514_79948751_1	chr11	-	430	4	ISM	ENSMUSG00000017561.17	ENSMUST00000061283.15	2396	8	23066	1195	23013	-1195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGGCTCCACTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	79948751	79938513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617
ENSMUSG00000017561.17_79947294_79950160_1	chr11	-	475	3	ISM	ENSMUSG00000017561.17	ENSMUST00000103233.10	2230	7	21604	9975	21604	-9975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACGCTGACATTCAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	79950160	79947293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79947411_79948617_79948841_79950025
ENSMUSG00000017561.17_79948750_79955094_1	chr11	-	434	4	ISM	ENSMUSG00000017561.17	ENSMUST00000103233.10	2230	7	16670	11431	16670	-11431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGTTCATAGTGTTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	79955094	79948749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79948841_79950025_79950204_79950923_79951012_79955017
ENSMUSG00000017561.17_79948802_79955144_1	chr11	-	432	4	ISM	ENSMUSG00000017561.17	ENSMUST00000103233.10	2230	7	16620	11483	16620	-11483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCGCAAATGTACTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	79955144	79948801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79948841_79950025_79950204_79950923_79951012_79955017
ENSMUSG00000017615.13_78414146_78418452_1	chr11	-	2323	2	ISM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	8645	470	8638	-470	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTCAGTGCTGTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	78418452	78414145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78416368_78418351
ENSMUSG00000017615.13_78414397_78419274_1	chr11	-	2279	4	ISM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	7823	721	7816	-721	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTCGTCCAGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	78419274	78414396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215
ENSMUSG00000017615.13_78414644_78420960_1	chr11	-	2340	6	ISM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	6137	968	6130	646	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCACAGATTATCAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	78420960	78414643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853
ENSMUSG00000017615.13_78414997_78427097_1	chr11	-	2386	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	61	1321	0	293	multi-exon	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTCTTTGGTGTGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	78427097	78414996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
ENSMUSG00000017615.13_78415065_78427097_1	chr11	-	2318	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	61	1389	0	225	multi-exon	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAAAATGGTTTTAATAG	NA	NA	NA	NA	NA	NA	NA	NA	78427097	78415064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
ENSMUSG00000017615.13_78415119_78427117_1	chr11	-	2284	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	41	1443	-20	171	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGTCAGCCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	78427117	78415118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
ENSMUSG00000017615.13_78415288_78419308_1	chr11	-	732	5	ISM	ENSMUSG00000017615.13	ENST00000544907.6	1076	7	7782	-2	7782	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTCTGACACTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	78419308	78415287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78415337_78416026_78416368_78418351_78418548_78419076_78419130_78419215
ENSMUSG00000017615.13_78416124_78426946_1	chr11	-	788	6	ISM	ENSMUSG00000017615.13	ENST00000544907.6	1076	7	144	834	144	-834	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAGAAATCGGGGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	78426946	78416123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78426911
ENSMUSG00000017615.13_78416204_78426978_1	chr11	-	740	6	ISM	ENSMUSG00000017615.13	ENST00000544907.6	1076	7	112	914	112	-914	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCATTCATGTCAAGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	78426978	78416203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78426911
ENSMUSG00000017615.13_78416256_78427097_1	chr11	-	807	6	ISM	ENSMUSG00000017615.13	ENST00000544907.6	1076	7	-7	966	0	-966	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTCCCCCAGTGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	78427097	78416255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78426911
ENSMUSG00000017631.20_76309930_76327900_1	chr11	-	915	8	FSM	ENSMUSG00000017631.20	ENST00000543210.6	958	8	41	2	41	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGGTGGGCAGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	76327900	76309929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76327774
ENSMUSG00000017631.20_76315806_76327900_1	chr11	-	230	3	ISM	ENSMUSG00000017631.20	ENST00000572441.5	373	4	41	842	41	-842	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAAGAGGACCCCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	76327900	76315805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_76315850_76316092_76316153_76327774
ENSMUSG00000017639.14_79551513_79575072_1	chr11	+	613	4	ISM	ENSMUSG00000017639.14	ENST00000394744.6	1899	13	102	8648	102	-8648	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGACATGCCTACAACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	79551512	79575072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79551683_79571613_79571838_79574166_79574362_79575048
ENSMUSG00000017639.14_79551593_79575108_1	chr11	+	569	4	ISM	ENSMUSG00000017639.14	ENST00000394744.6	1899	13	182	8612	182	-8612	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCTCAGTGCTGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	79551592	79575108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79551683_79571613_79571838_79574166_79574362_79575048
ENSMUSG00000017639.14_79551641_79575164_1	chr11	+	577	4	ISM	ENSMUSG00000017639.14	ENST00000394744.6	1899	13	230	8556	230	-8556	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACCTGAAGGCCAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	79551640	79575164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79551683_79571613_79571838_79574166_79574362_79575048
ENSMUSG00000017639.14_79571690_79575915_1	chr11	+	576	5	ISM	ENSMUSG00000017639.14	ENST00000394744.6	1899	13	20279	7805	20279	-7805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATCGACTCCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	79571689	79575915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853
ENSMUSG00000017639.14_79571796_79576274_1	chr11	+	571	6	ISM	ENSMUSG00000017639.14	ENST00000394744.6	1899	13	20385	7446	20385	-7446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGCAAGCTGAAGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	79571795	79576274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211
ENSMUSG00000017639.14_79574196_79577408_1	chr11	+	572	6	ISM	ENSMUSG00000017639.14	ENST00000394744.6	1899	13	22785	6312	22785	-6312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGACCACAGCGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	79574195	79577408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377
ENSMUSG00000017639.14_79574252_79577461_1	chr11	+	569	6	ISM	ENSMUSG00000017639.14	ENST00000394744.6	1899	13	22841	6259	22841	-6259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTACTGCAAGCTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	79574251	79577461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377
ENSMUSG00000017639.14_79574344_79580483_1	chr11	+	577	7	ISM	ENSMUSG00000017639.14	ENST00000394744.6	1899	13	22933	3237	22933	-3237	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTCGACTCAAGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	79574343	79580483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440
ENSMUSG00000017639.14_79575128_79581332_1	chr11	+	568	7	ISM	ENSMUSG00000017639.14	ENST00000394744.6	1899	13	23717	2388	23717	-2388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACGAGATGGACCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	79575127	79581332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283
ENSMUSG00000017639.14_79575902_79581567_1	chr11	+	587	6	ISM	ENSMUSG00000017639.14	ENST00000394744.6	1899	13	24491	2153	24491	-2153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCGCAGCTCCTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	79575901	79581567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497
ENSMUSG00000017639.14_79576275_79582605_1	chr11	+	582	6	ISM	ENSMUSG00000017639.14	ENST00000394744.6	1899	13	24864	1115	24864	-1115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATGATTTAAATGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	79576274	79582605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581
ENSMUSG00000017639.14_79577487_79583627_1	chr11	+	631	6	ISM	ENSMUSG00000017639.14	ENST00000394744.6	1899	13	26076	93	26076	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCACAACCCCTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	79577486	79583627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ENSMUSG00000017639.14_79580472_79583627_1	chr11	+	568	5	ISM	ENSMUSG00000017639.14	ENST00000394744.6	1899	13	29061	93	29061	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCACAACCCCTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	79580471	79583627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ENSMUSG00000017664.17_165119150_165122605_1	chr2	-	419	4	ISM	ENSMUSG00000017664.17	ENSMUST00000109299.8	1926	10	7070	676	7070	-676	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGGAACTGCTGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	165122605	165119149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536
ENSMUSG00000017670.17_165131846_165137006_1	chr2	-	870	4	ISM	ENSMUSG00000017670.17	ENST00000352077.6	2157	20	21230	-435	21230	435	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTCTGAGGGCTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	165137006	165131845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933
ENSMUSG00000017670.17_165132452_165139503_1	chr2	-	865	9	ISM	ENSMUSG00000017670.17	ENST00000352077.6	2157	20	18733	171	18733	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGGGGAAGGATATGTC	NA	NA	NA	NA	NA	NA	NA	NA	165139503	165132451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460
ENSMUSG00000017670.17_165137467_165150912_1	chr2	-	899	9	ISM	ENSMUSG00000017670.17	ENSMUST00000071699.11	3247	20	7911	4430	7324	-4430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGCCTGAGCTACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	165150912	165137466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832
ENSMUSG00000017670.17_165140199_165153691_1	chr2	-	713	7	ISM	ENSMUSG00000017670.17	ENST00000352077.6	2157	20	4545	7918	4545	-7162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCCCGGGAGTGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	165153691	165140198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152189_165153542
ENSMUSG00000017670.17_165140588_165158271_1	chr2	-	917	10	ISM	ENSMUSG00000017670.17	ENSMUST00000071699.11	3247	20	552	7551	-35	-7551	internal_fragment	TRUE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTTCTGGAAGAAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	165158271	165140587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158
ENSMUSG00000017677.12_79130214_79131584_1	chr11	-	1146	2	ISM	ENSMUSG00000017677.12	ENSMUST00000017821.12	2476	9	13913	16	13848	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACATTGCCGATATTTC	NA	NA	NA	NA	NA	NA	NA	NA	79131584	79130213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79131289_79131513
ENSMUSG00000017677.12_79130346_79132440_1	chr11	-	1071	3	ISM	ENSMUSG00000017677.12	ENSMUST00000017821.12	2476	9	13057	148	12992	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAATACACAGTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	79132440	79130345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79131289_79131513_79131622_79132420
ENSMUSG00000017677.12_79130469_79132855_1	chr11	-	1088	4	ISM	ENSMUSG00000017677.12	ENST00000348811.6	1392	7	12577	-310	12577	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACATCTACTGTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	79132855	79130468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809
ENSMUSG00000017677.12_79130529_79132900_1	chr11	-	1073	4	ISM	ENSMUSG00000017677.12	ENST00000348811.6	1392	7	12532	-250	12532	250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAAGCAGCTACTTACC	NA	NA	NA	NA	NA	NA	NA	NA	79132900	79130528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809
ENSMUSG00000017677.12_79130564_79132975_1	chr11	-	1113	4	ISM	ENSMUSG00000017677.12	ENST00000348811.6	1392	7	12457	-215	12457	215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAAAAAAAGGTTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	79132975	79130563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809
ENSMUSG00000017677.12_79130837_79145365_2	chr11	-	1267	7	FSM	ENSMUSG00000017677.12	ENST00000348811.6	1392	7	67	58	67	-58	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGTTCTGACCTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	79145365	79130836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79135288_79135390_79136995_79137128_79145178
ENSMUSG00000017677.12_79131102_79141850_1	chr11	-	1128	8	ISM	ENSMUSG00000017677.12	ENSMUST00000017821.12	2476	9	3647	904	3582	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGACAGAGCGCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	79141850	79131101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79135288_79135390_79136995_79137128_79139216_79139486_79141806
ENSMUSG00000017677.12_79131580_79145296_1	chr11	-	1118	8	ISM	ENSMUSG00000017677.12	ENSMUST00000017821.12	2476	9	201	1382	136	-801	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCACCTTTGAGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	79145296	79131579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79131622_79132420_79132535_79132809_79132983_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ENSMUSG00000017677.12_79132809_79145495_1	chr11	-	1162	6	ISM	ENSMUSG00000017677.12	ENSMUST00000017821.12	2476	9	2	2611	2	-2030	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTACCACATGAATTATT	NA	NA	NA	NA	NA	NA	NA	NA	79145495	79132808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79132983_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ENSMUSG00000017679.17_163449475_163458026_1	chr2	+	1169	4	ISM	ENSMUSG00000017679.17	ENSMUST00000109408.10	1999	5	5233	394	5233	-394	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTAGAAACCCCAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	163449474	163458026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163449595_163453678_163453873_163455654_163455766_163457282
ENSMUSG00000017686.18_80099973_80157353_1	chr11	+	2788	20	FSM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	92	1380	28	-240	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTTTGTATATTATCA	NA	NA	NA	NA	NA	NA	NA	NA	80099972	80157353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
ENSMUSG00000017686.18_80099973_80158313_2	chr11	+	3625	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	63	-1	28	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTTTTCAAAGACAACT	NA	NA	NA	NA	NA	NA	NA	NA	80099972	80158313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ENSMUSG00000017686.18_80114751_80157564_1	chr11	+	2741	18	ISM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	14870	1169	14806	-29	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTCACAATAAACCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	80114750	80157564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
ENSMUSG00000017686.18_80124213_80157741_1	chr11	+	2702	14	ISM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	24332	992	24268	103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTACTCGGTAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	80124212	80157741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
ENSMUSG00000017686.18_80124785_80157850_1	chr11	+	2677	13	ISM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	24904	883	24840	212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGTCGTCTACTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	80124784	80157850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
ENSMUSG00000017686.18_80141061_80158733_1	chr11	+	2800	6	ISM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	41180	0	41116	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCACTGTGCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	80141060	80158733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
ENSMUSG00000017688.15_3706269_3722236_1	chr3	+	1095	8	ISM	ENSMUSG00000017688.15	ENSMUST00000108394.3	2327	10	7059	876	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGGCTTCCTTCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	3706268	3722236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_3706378_3708023_3708131_3709595_3709752_3713093_3713182_3716331_3716485_3716607_3716845_3717896_3718020_3722114
ENSMUSG00000017692.9_80191738_80244769_1	chr11	+	1712	8	NNC	ENSMUSG00000017692.9	novel	1750	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCCTCTCACTGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	80191737	80244769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_80192098_80210364_80210543_80214184_80214410_80221382_80221532_80222620_80222727_80228312_80228414_80237651_80237713_80244237
ENSMUSG00000017692.9_80191738_80244769_10	chr11	+	1717	8	NNC	ENSMUSG00000017692.9	novel	1750	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCCTCTCACTGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	80191737	80244769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_80192098_80210366_80210543_80214184_80214410_80221382_80221532_80222620_80222734_80228312_80228414_80237651_80237713_80244237
ENSMUSG00000017692.9_80191738_80244769_2	chr11	+	1718	8	NNC	ENSMUSG00000017692.9	novel	1750	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCCTCTCACTGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	80191737	80244769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_80192098_80210364_80210543_80214184_80214409_80221382_80221532_80222620_80222734_80228312_80228414_80237651_80237713_80244237
ENSMUSG00000017692.9_80191738_80244769_4	chr11	+	1718	8	NNC	ENSMUSG00000017692.9	novel	1750	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCCTCTCACTGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	80191737	80244769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_80192098_80210364_80210543_80214185_80214410_80221382_80221532_80222620_80222734_80228312_80228414_80237651_80237713_80244237
ENSMUSG00000017692.9_80191738_80244769_5	chr11	+	1709	8	NNC	ENSMUSG00000017692.9	novel	1750	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCCTCTCACTGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	80191737	80244769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_80192098_80210364_80210543_80214184_80214410_80221382_80221532_80222630_80222734_80228312_80228414_80237651_80237713_80244237
ENSMUSG00000017692.9_80191738_80244769_6	chr11	+	1718	8	NNC	ENSMUSG00000017692.9	novel	1750	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCCTCTCACTGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	80191737	80244769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_80192098_80210364_80210543_80214184_80214410_80221382_80221532_80222620_80222734_80228312_80228414_80237652_80237713_80244237
ENSMUSG00000017692.9_80191738_80244769_7	chr11	+	1713	8	NNC	ENSMUSG00000017692.9	novel	1750	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCCTCTCACTGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	80191737	80244769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_80192098_80210364_80210543_80214184_80214410_80221382_80221532_80222620_80222734_80228312_80228408_80237651_80237713_80244237
ENSMUSG00000017692.9_80191738_80244769_8	chr11	+	1717	8	NNC	ENSMUSG00000017692.9	novel	1750	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCCTCTCACTGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	80191737	80244769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_80192098_80210364_80210543_80214184_80214410_80221382_80221532_80222620_80222734_80228314_80228414_80237651_80237713_80244237
ENSMUSG00000017692.9_80191738_80244769_9	chr11	+	1719	8	FSM	ENSMUSG00000017692.9	ENST00000269051.9	1750	8	31	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCCTCTCACTGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	80191737	80244769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_80192098_80210364_80210543_80214184_80214410_80221382_80221532_80222620_80222734_80228312_80228414_80237651_80237713_80244237
ENSMUSG00000017697.4_163568504_163591998_1	chr2	-	1527	12	FSM	ENSMUSG00000017697.4	ENSMUST00000017841.4	1688	12	161	0	161	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGGGTGTTTTGCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	163591998	163568503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_163568969_163569463_163569564_163570036_163570167_163571931_163571997_163572217_163572320_163572400_163572473_163573024_163573153_163574176_163574293_163574773_163574918_163577268_163577392_163580082_163580145_163591978
ENSMUSG00000017697.4_163568609_163592159_1	chr2	-	1583	12	FSM	ENSMUSG00000017697.4	ENSMUST00000017841.4	1688	12	0	105	0	-105	multi-exon	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGAGGGGCTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	163592159	163568608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_163568969_163569463_163569564_163570036_163570167_163571931_163571997_163572217_163572320_163572400_163572473_163573024_163573153_163574176_163574293_163574773_163574918_163577268_163577392_163580082_163580145_163591978
ENSMUSG00000017697.4_163570047_163577391_1	chr2	-	798	7	FSM	ENSMUSG00000017697.4	ENST00000537820.1	800	7	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCGACTGGTGAGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	163577391	163570046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_163570167_163571931_163571997_163572217_163572320_163573024_163573153_163574176_163574293_163574773_163574918_163577268
ENSMUSG00000017697.4_163570047_163577391_2	chr2	-	797	7	NNC	ENSMUSG00000017697.4	novel	800	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCGACTGGTGAGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	163577391	163570046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_163570167_163571931_163571997_163572217_163572320_163573024_163573153_163574177_163574293_163574773_163574918_163577268
ENSMUSG00000017697.4_163570047_163577391_3	chr2	-	793	7	NNC	ENSMUSG00000017697.4	novel	800	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCGACTGGTGAGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	163577391	163570046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_163570167_163571936_163571997_163572217_163572320_163573024_163573153_163574176_163574293_163574773_163574918_163577268
ENSMUSG00000017707.10_163466503_163468248_1	chr2	-	1073	2	ISM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	18803	1311	18803	-1311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTTCCAAGTACTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	163468248	163466502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_163467500_163468172
ENSMUSG00000017707.10_163466556_163468341_1	chr2	-	1113	2	ISM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	18710	1364	18710	-1364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGTCTTTTCCACATAA	NA	NA	NA	NA	NA	NA	NA	NA	163468341	163466555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_163467500_163468172
ENSMUSG00000017707.10_163466744_163469897_1	chr2	-	1087	3	ISM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	17154	1552	17154	-1552	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCAAGTAAATGCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	163469897	163466743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_163467500_163468172_163468398_163469791
ENSMUSG00000017707.10_163466984_163472924_1	chr2	-	1092	5	ISM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	14127	1792	14127	-1792	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTATTTTTAATTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	163472924	163466983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845
ENSMUSG00000017707.10_163467193_163474129_1	chr2	-	1078	6	ISM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	12922	2001	12922	-2001	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTTTCATATATATATAT	NA	NA	NA	NA	NA	NA	NA	NA	163474129	163467192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025
ENSMUSG00000017707.10_163467410_163478831_1	chr2	-	1076	8	ISM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	8220	2218	8220	-2218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGACTCTTGTGGCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	163478831	163467409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730
ENSMUSG00000017707.10_163467457_163478896_1	chr2	-	1094	8	ISM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	8155	2265	8155	-2265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGTTCAAAATGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	163478896	163467456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730
ENSMUSG00000017707.10_163468285_163481201_1	chr2	-	1083	8	ISM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	5850	3093	5850	-3093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGCTGTAGACAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	163481201	163468284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085
ENSMUSG00000017707.10_163469809_163487045_1	chr2	-	1127	8	ISM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	6	4617	6	-4617	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTATATATTCTAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	163487045	163469808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
ENSMUSG00000017715.12_117877552_117888414_1	chr11	+	436	2	ISM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	-137	25942	-137	-25942	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTACTGTCTTCCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	117877551	117888414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117877840_117888266
ENSMUSG00000017715.12_117888265_117893298_1	chr11	+	492	4	ISM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	10576	21058	10576	-21058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATGAGACCATCGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	117888264	117893298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117888457_117891024_117891103_117892441_117892542_117893176
ENSMUSG00000017715.12_117888414_117894229_1	chr11	+	474	5	ISM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	10725	20127	10725	-20127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGATTGCCGACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	117888413	117894229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166
ENSMUSG00000017715.12_117892505_117896233_1	chr11	+	444	4	ISM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	14816	18123	14816	-18123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGGACGTCATCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	117892504	117896233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117892542_117893176_117893367_117894166_117894346_117896195
ENSMUSG00000017715.12_117893248_117896355_1	chr11	+	458	3	ISM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	15559	18001	15559	-18001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACACCTGGATTTACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	117893247	117896355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117893367_117894166_117894346_117896195
ENSMUSG00000017715.12_117893315_117896406_1	chr11	+	442	3	ISM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	15626	17950	15626	-17950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGAGATAGTCACGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	117893314	117896406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117893367_117894166_117894346_117896195
ENSMUSG00000017715.12_117894228_117896523_1	chr11	+	446	2	ISM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	16539	17833	16539	-17833	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGAGTATCAGATCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	117894227	117896523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117894346_117896195
ENSMUSG00000017715.12_117894280_117896577_1	chr11	+	448	2	ISM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	16591	17779	16591	-17779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGCGTGGCGGGCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	117894279	117896577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117894346_117896195
ENSMUSG00000017715.12_117896380_117905496_1	chr11	+	435	2	ISM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	18691	8860	18691	-8860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATTGCCATCGTGACGG	NA	NA	NA	NA	NA	NA	NA	NA	117896379	117905496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117896718_117905399
ENSMUSG00000017715.12_117896633_117914356_1	chr11	+	486	4	ISM	ENSMUSG00000017715.12	ENSMUST00000132676.8	2863	10	19515	481	18944	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGGGGAGGCAGAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	117896632	117914356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117896718_117905399_117905549_117910432_117910559_117914230
ENSMUSG00000017715.12_117910429_117914356_1	chr11	+	260	2	ISM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	32740	0	32740	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGGGGAGGCAGAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	117910428	117914356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117910563_117914230
ENSMUSG00000017716.16_117740145_117746410_1	chr11	+	731	4	FSM	ENSMUSG00000017716.16	ENSMUST00000081387.11	947	4	68	148	0	-148	multi-exon	FALSE	canonical	NA	NA	NA	NA	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTGGTTCTGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	117740144	117746410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_117740288_117740579_117740690_117743488_117743607_117746050
ENSMUSG00000017716.16_117740145_117746410_2	chr11	+	725	4	NNC	ENSMUSG00000017716.16	novel	947	4	NA	NA	0	-148	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1069	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTGGTTCTGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	117740144	117746410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_117740288_117740579_117740690_117743488_117743607_117746056
ENSMUSG00000017716.16_117740580_117746559_1	chr11	+	737	3	ISM	ENSMUSG00000017716.16	ENSMUST00000081387.11	947	4	503	-1	435	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAAGCTCTGTCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	117740579	117746559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117740690_117743488_117743607_117746050
ENSMUSG00000017716.16_117740580_117746559_2	chr11	+	731	3	NNC	ENSMUSG00000017716.16	novel	947	4	NA	NA	435	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAAGCTCTGTCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	117740579	117746559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_117740690_117743488_117743607_117746056
ENSMUSG00000017718.16_117726522_117730382_1	chr11	+	1281	3	ISM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	9772	352	9772	-352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCTTCCAACCCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	117726521	117730382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117726634_117727233_117727339_117729318
ENSMUSG00000017718.16_117726580_117730442_1	chr11	+	1283	3	ISM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	9830	292	9830	-292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTAGATGCCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	117726579	117730442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117726634_117727233_117727339_117729318
ENSMUSG00000017721.16_164339481_164344535_1	chr2	+	774	6	ISM	ENSMUSG00000017721.16	ENST00000640210.1	1349	9	11	4910	11	-505	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACCTGCGGCTGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	164339480	164344535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164339678_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397
ENSMUSG00000017721.16_164339481_164344645_1	chr2	+	1291	9	FSM	ENSMUSG00000017721.16	ENSMUST00000117066.8	1712	9	26	395	11	-395	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTCAGCTTTAGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	164339480	164344645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397
ENSMUSG00000017721.16_164339615_164349352_1	chr2	+	936	7	FSM	ENSMUSG00000017721.16	ENST00000545755.3	1079	7	50	93	50	-93	multi-exon	TRUE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGAACCTTTCACATCGAA	NA	NA	NA	NA	NA	NA	NA	NA	164339614	164349352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_164339678_164343193_164343292_164343404_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194
ENSMUSG00000017721.16_164339615_164349359_1	chr2	+	938	7	NNC	ENSMUSG00000017721.16	novel	1079	7	NA	NA	50	-86	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCACATCGAAGAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	164339614	164349359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_164339678_164343193_164343292_164343404_164343571_164344397_164344599_164348302_164348464_164348569_164348654_164349194
ENSMUSG00000017721.16_164339640_164348362_1	chr2	+	738	7	ISM	ENSMUSG00000017721.16	ENST00000640210.1	1349	9	170	1083	75	-1083	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCTGCCAGCCAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	164339639	164348362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164339678_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397_164344599_164348302
ENSMUSG00000017721.16_164339661_164349408_1	chr2	+	946	7	FSM	ENSMUSG00000017721.16	ENST00000545755.3	1079	7	96	37	96	-37	multi-exon	FALSE	canonical	NA	NA	NA	NA	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCATCCGCCGTGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	164339660	164349408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_164339678_164343193_164343292_164343404_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194
ENSMUSG00000017721.16_164339819_164344835_1	chr2	+	1251	8	ISM	ENSMUSG00000017721.16	ENSMUST00000117066.8	1712	9	364	205	254	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGGGGCCAGCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	164339818	164344835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397
ENSMUSG00000017721.16_164339896_164344912_1	chr2	+	1251	8	ISM	ENSMUSG00000017721.16	ENSMUST00000117066.8	1712	9	441	128	331	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTCTGAGAGAGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	164339895	164344912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397
ENSMUSG00000017721.16_164341836_164345041_1	chr2	+	1191	7	ISM	ENSMUSG00000017721.16	ENSMUST00000117066.8	1712	9	2381	-1	2271	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCACTGTTAATCATAAAC	NA	NA	NA	NA	NA	NA	NA	NA	164341835	164345041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397
ENSMUSG00000017721.16_164341836_164350084_1	chr2	+	1888	10	ISM	ENSMUSG00000017721.16	ENSMUST00000103101.11	2562	12	2396	137	2271	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTACTGGACATTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	164341835	164350084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194
ENSMUSG00000017724.15_101660568_101675214_1	chr11	-	2082	11	NNC	ENSMUSG00000017724.15	novel	2092	12	NA	NA	281	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTCTTTGCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	101675214	101660567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_101661417_101661794_101661889_101662153_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101664906_101665072_101666143_101666271_101667918_101667973_101674792_101674841_101675055
ENSMUSG00000017724.15_101660568_101675674_1	chr11	-	2080	12	NNC	ENSMUSG00000017724.15	novel	2092	12	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTCTTTGCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	101675674	101660567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_101661417_101661794_101661889_101662149_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101664906_101665072_101666143_101666271_101667918_101667973_101674792_101674841_101675055_101675150_101675615
ENSMUSG00000017724.15_101660568_101675674_2	chr11	-	2084	12	FSM	ENSMUSG00000017724.15	ENST00000538265.5	2092	12	17	-9	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTCTTTGCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	101675674	101660567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101664906_101665072_101666143_101666271_101667918_101667973_101674792_101674841_101675055_101675150_101675615
ENSMUSG00000017724.15_101660568_101675674_3	chr11	-	2077	12	NNC	ENSMUSG00000017724.15	novel	2092	12	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTCTTTGCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	101675674	101660567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662713_101662782_101664434_101664704_101664906_101665072_101666143_101666271_101667918_101667973_101674792_101674841_101675055_101675150_101675615
ENSMUSG00000017724.15_101660568_101675674_4	chr11	-	2079	12	NNC	ENSMUSG00000017724.15	novel	2092	12	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTCTTTGCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	101675674	101660567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101664906_101665072_101666143_101666271_101667918_101667968_101674792_101674841_101675055_101675150_101675615
ENSMUSG00000017724.15_101662180_101666170_1	chr11	-	587	5	ISM	ENSMUSG00000017724.15	ENST00000545089.5	1571	11	9325	1170	9325	-1170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTAAACTAATTGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	101666170	101662179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101666143
ENSMUSG00000017724.15_101662230_101666223_1	chr11	-	590	5	ISM	ENSMUSG00000017724.15	ENST00000545089.5	1571	11	9272	1220	9272	-1220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGACCCAACAAATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	101666223	101662229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101666143
ENSMUSG00000017724.15_101662297_101667955_1	chr11	-	607	6	ISM	ENSMUSG00000017724.15	ENST00000545089.5	1571	11	7540	1287	7540	-1287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGGAGGGGCCACCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	101667955	101662296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101666143_101666271_101667918
ENSMUSG00000017724.15_101662514_101674842_1	chr11	-	645	6	ISM	ENSMUSG00000017724.15	ENST00000545089.5	1571	11	653	1504	653	-1504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGAAGTGACTTGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	101674842	101662513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101662584_101662706_101662782_101664434_101664704_101666143_101666271_101667918_101667973_101674792
ENSMUSG00000017724.15_101664518_101675436_1	chr11	-	603	6	ISM	ENSMUSG00000017724.15	ENST00000545089.5	1571	11	59	3508	59	-3508	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGTGGGGTCAGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	101675436	101664517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101664704_101666143_101666271_101667918_101667973_101674792_101674841_101675055_101675150_101675342
ENSMUSG00000017724.15_101664518_101675475_1	chr11	-	642	6	ISM	ENSMUSG00000017724.15	ENST00000545089.5	1571	11	20	3508	20	-3508	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGTGGGGTCAGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	101675475	101664517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101664704_101666143_101666271_101667918_101667973_101674792_101674841_101675055_101675150_101675342
ENSMUSG00000017734.16_164328542_164330529_1	chr2	+	255	3	ISM	ENSMUSG00000017734.16	ENSMUST00000069385.15	1658	4	167	2666	167	-2056	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGAGCAAGTGGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	164328541	164330529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164328608_164330161_164330309_164330487
ENSMUSG00000017734.16_164329053_164332680_1	chr2	+	1439	4	FSM	ENSMUSG00000017734.16	ENST00000372712.6	1344	4	0	-95	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCATTTCACCTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	164329052	164332680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_164329582_164330161_164330309_164330487_164330626_164332055
ENSMUSG00000017747.14_100657757_100658912_1	chr11	-	340	3	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	2270	126	2270	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTTCAGGGTTCTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	100658912	100657756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100657851_100658109_100658283_100658839
ENSMUSG00000017747.14_100657816_100658973_1	chr11	-	342	3	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	2209	185	2209	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTCCTTGCGATTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	100658973	100657815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100657851_100658109_100658283_100658839
ENSMUSG00000017747.14_100658135_100659232_1	chr11	-	376	4	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	1950	504	1950	-504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCGGAGGAAAATCGAG	NA	NA	NA	NA	NA	NA	NA	NA	100659232	100658134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100658283_100658839_100658974_100659043_100659116_100659210
ENSMUSG00000017747.14_100658196_100659286_1	chr11	-	369	4	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	1896	565	1896	-565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGTGAGGGTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	100659286	100658195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100658283_100658839_100658974_100659043_100659116_100659210
ENSMUSG00000017747.14_100659057_100659941_1	chr11	-	340	3	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	1241	1426	1241	-1426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCACCTGCAGGTAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	100659941	100659056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100659116_100659210_100659404_100659853
ENSMUSG00000017747.14_100659257_100660050_1	chr11	-	344	2	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	1132	1626	1132	-1626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGAGTATGAGTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	100660050	100659256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100659404_100659853
ENSMUSG00000017747.14_100659306_100660110_1	chr11	-	355	2	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	1072	1675	1072	-1675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAGAGGAGGCAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	100660110	100659305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100659404_100659853
ENSMUSG00000017747.14_100659359_100660160_1	chr11	-	352	2	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	1022	1728	1022	-1728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTGCCCCCTGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	100660160	100659358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100659404_100659853
ENSMUSG00000017747.14_100660036_100660517_1	chr11	-	356	2	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	665	2405	665	-2405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCTGAGCTGAAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	100660517	100660035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100660356_100660481
ENSMUSG00000017747.14_100660104_100660562_1	chr11	-	333	2	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	620	2473	620	-2473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGATGGTGAAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	100660562	100660103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100660356_100660481
ENSMUSG00000017747.14_100660206_100660975_1	chr11	-	352	3	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	207	2575	207	-2575	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACCCCCGGACCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	100660975	100660205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100660356_100660481_100660604_100660895
ENSMUSG00000017747.14_100660262_100661024_1	chr11	-	345	3	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	158	2631	158	-2631	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTCTGTCCCCTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	100661024	100660261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100660356_100660481_100660604_100660895
ENSMUSG00000017747.14_100660313_100661093_1	chr11	-	363	3	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	89	2682	89	-2682	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCTGGCTCCAGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	100661093	100660312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100660356_100660481_100660604_100660895
ENSMUSG00000017754.14_164681438_164686422_1	chr2	-	563	5	ISM	ENSMUSG00000017754.14	ENST00000420868.2	1244	13	12489	-146	12489	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTCTAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	164686422	164681437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354
ENSMUSG00000017754.14_164681681_164688736_1	chr2	-	622	8	ISM	ENSMUSG00000017754.14	ENST00000420868.2	1244	13	10175	97	10175	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCAGACGTTGCGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	164688736	164681680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659
ENSMUSG00000017754.14_164682241_164693524_1	chr2	-	669	7	ISM	ENSMUSG00000017754.14	ENST00000420868.2	1244	13	5387	657	5387	-657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGACTGAGGGTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	164693524	164682240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432
ENSMUSG00000017754.14_164682411_164694456_1	chr2	-	673	7	ISM	ENSMUSG00000017754.14	ENST00000420868.2	1244	13	4455	827	4455	-827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGGATGGCAAAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	164694456	164682410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392
ENSMUSG00000017754.14_164686353_164694600_1	chr2	-	692	7	ISM	ENSMUSG00000017754.14	ENST00000420868.2	1244	13	4311	4769	4311	-4769	internal_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCCAGCCTTAGCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	164694600	164686352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536
ENSMUSG00000017754.14_164686353_164698917_1	chr2	-	1188	11	ISM	ENSMUSG00000017754.14	ENSMUST00000109316.8	2226	15	545	4915	-6	-4769	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCCAGCCTTAGCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	164698917	164686352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806
ENSMUSG00000017754.14_164686567_164696210_1	chr2	-	595	7	ISM	ENSMUSG00000017754.14	ENSMUST00000109316.8	2226	15	3252	5129	2701	-4983	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGGCCCCGCCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	164696210	164686566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185
ENSMUSG00000017754.14_164686648_164698858_1	chr2	-	641	8	ISM	ENSMUSG00000017754.14	ENST00000420868.2	1244	13	53	5064	53	-5064	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTAGAGGCCACGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	164698858	164686647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164698623_164698724_164698806
ENSMUSG00000017754.14_164688733_164699128_1	chr2	-	1031	8	ISM	ENSMUSG00000017754.14	ENSMUST00000109316.8	2226	15	334	7295	-217	-7149	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTCTTTGACTCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	164699128	164688732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806
ENSMUSG00000017754.14_164688733_164699189_1	chr2	-	1092	8	ISM	ENSMUSG00000017754.14	ENSMUST00000109316.8	2226	15	273	7295	273	-7149	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTCTTTGACTCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	164699189	164688732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806
ENSMUSG00000017754.14_164694393_164699462_1	chr2	-	1169	6	ISM	ENSMUSG00000017754.14	ENSMUST00000109316.8	2226	15	0	12955	0	-12809	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCAGGGTGGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	164699462	164694392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806
ENSMUSG00000017760.17_164675041_164676806_1	chr2	+	594	6	ISM	ENSMUSG00000017760.17	ENSMUST00000103092.9	3646	16	220	6146	220	-4658	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCGGATGACAAGATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	164675040	164676806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164675117_164675643_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757
ENSMUSG00000017760.17_164675727_164677113_1	chr2	+	511	6	ISM	ENSMUSG00000017760.17	ENST00000372484.8	2924	15	1104	4388	14	-4351	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCTCTTTCCGGAATACA	NA	NA	NA	NA	NA	NA	NA	NA	164675726	164677113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075
ENSMUSG00000017760.17_164675767_164677231_1	chr2	+	589	6	ISM	ENSMUSG00000017760.17	ENST00000372484.8	2924	15	1144	4270	54	-4233	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGGGCAGCTACCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	164675766	164677231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075
ENSMUSG00000017760.17_164675950_164679178_1	chr2	+	884	8	ISM	ENSMUSG00000017760.17	ENST00000354880.9	1783	14	237	2323	-24	-2286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCGGGGGTATGAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	164675949	164679178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164676129_164676239_164676352_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164679002_164679101
ENSMUSG00000017760.17_164675993_164678924_1	chr2	+	738	8	ISM	ENSMUSG00000017760.17	ENST00000678443.1	1625	13	19	2540	19	-2540	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGGCAAATCTGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	164675992	164678924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905
ENSMUSG00000017760.17_164675993_164678955_1	chr2	+	769	8	ISM	ENSMUSG00000017760.17	ENST00000678443.1	1625	13	19	2509	19	-2509	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTATGCTCCGTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	164675992	164678955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905
ENSMUSG00000017760.17_164676095_164679320_1	chr2	+	782	9	ISM	ENSMUSG00000017760.17	ENST00000354880.9	1783	14	382	2181	121	-2144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAACACCACAGCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	164676094	164679320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164676129_164676239_164676352_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164679002_164679101_164679178_164679276
ENSMUSG00000017760.17_164676230_164679177_1	chr2	+	761	8	ISM	ENSMUSG00000017760.17	ENSMUST00000103093.10	2534	15	1437	2762	256	-2287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCGGGGGTATGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	164676229	164679177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101
ENSMUSG00000017760.17_164676325_164680016_1	chr2	+	779	9	ISM	ENSMUSG00000017760.17	ENST00000354880.9	1783	14	612	1485	351	-1448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGCCGCCTCTACCAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	164676324	164680016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164676352_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164679002_164679101_164679178_164679276_164679417_164679996
ENSMUSG00000017760.17_164676617_164679299_1	chr2	+	663	8	ISM	ENSMUSG00000017760.17	ENSMUST00000103093.10	2534	15	1824	2640	643	-2165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACGCTTGGATCCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	164676616	164679299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276
ENSMUSG00000017760.17_164676617_164679416_1	chr2	+	780	8	ISM	ENSMUSG00000017760.17	ENSMUST00000103093.10	2534	15	1824	2523	643	-2048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTTCTTTGGCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	164676616	164679416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276
ENSMUSG00000017760.17_164676757_164680072_1	chr2	+	805	8	ISM	ENSMUSG00000017760.17	ENSMUST00000103093.10	2534	15	1964	1867	783	-1392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTGCGCAACACAGC	NA	NA	NA	NA	NA	NA	NA	NA	164676756	164680072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996
ENSMUSG00000017760.17_164677077_164680781_1	chr2	+	733	8	NIC	ENSMUSG00000017760.17	novel	2534	15	NA	NA	1103	-683	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGCTAGTGGACTACG	NA	NA	NA	NA	NA	NA	NA	NA	164677076	164680781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680764
ENSMUSG00000017760.17_164677148_164680837_1	chr2	+	808	9	ISM	ENSMUSG00000017760.17	ENSMUST00000103093.10	2534	15	2355	1102	1174	-627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1041	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTCACACATCACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	164677147	164680837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764
ENSMUSG00000017760.17_164677163_164680816_1	chr2	+	682	8	NIC	ENSMUSG00000017760.17	novel	2534	15	NA	NA	1189	-648	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAGCTGGTTTCGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	164677162	164680816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680764
ENSMUSG00000017760.17_164677214_164680868_1	chr2	+	683	8	NIC	ENSMUSG00000017760.17	novel	2534	15	NA	NA	1240	-596	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGGACTTTGTGCCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	164677213	164680868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680764
ENSMUSG00000017760.17_164677577_164681144_1	chr2	+	803	9	ISM	ENSMUSG00000017760.17	ENSMUST00000103093.10	2534	15	2784	795	1603	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTACTGATAGCTTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	164677576	164681144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ENSMUSG00000017760.17_164677590_164681135_1	chr2	+	691	8	NIC	ENSMUSG00000017760.17	novel	2534	15	NA	NA	1616	-329	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAAGAGCCTTACTGAT	NA	NA	NA	NA	NA	NA	NA	NA	164677589	164681135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680764_164680870_164681070
ENSMUSG00000017760.17_164678406_164681263_1	chr2	+	708	7	NIC	ENSMUSG00000017760.17	novel	2534	15	NA	NA	2432	-201	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTGCCCAGACTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	164678405	164681263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680764_164680870_164681070
ENSMUSG00000017760.17_164678977_164681352_1	chr2	+	790	7	ISM	ENSMUSG00000017760.17	ENSMUST00000103093.10	2534	15	4184	587	3003	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCCATCGTGGGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	164678976	164681352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ENSMUSG00000017760.17_164679102_164681464_1	chr2	+	791	5	ISM	ENSMUSG00000017760.17	ENST00000678443.1	1625	13	3128	0	3128	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	983	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGACTAATTCTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	164679101	164681464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164679178_164679276_164679417_164679996_164680073_164680764_164680870_164681070
ENSMUSG00000017760.17_164679275_164681464_1	chr2	+	717	4	ISM	ENSMUSG00000017760.17	ENST00000678443.1	1625	13	3301	0	3301	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGACTAATTCTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	164679274	164681464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164679417_164679996_164680073_164680764_164680870_164681070
ENSMUSG00000017764.3_164664606_164667808_1	chr2	+	1722	2	FSM	ENSMUSG00000017764.3	ENSMUST00000017908.3	2705	2	0	983	0	-983	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTACTTTAACCAAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	164664605	164667808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_164665121_164666601
ENSMUSG00000017765.18_106670391_106674583_1	chr8	-	1833	11	ISM	ENSMUSG00000017765.18	ENST00000541864.6	3585	24	16561	0	16561	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAAAGGGGAAGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	106674583	106670390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484
ENSMUSG00000017765.18_106670605_106676345_1	chr8	-	1798	13	ISM	ENSMUSG00000017765.18	ENST00000541864.6	3585	24	14799	214	14799	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACGTCTCCAGGGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	106676345	106670604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285
ENSMUSG00000017765.18_106670750_106676849_1	chr8	-	1789	14	ISM	ENSMUSG00000017765.18	ENST00000541864.6	3585	24	14295	359	14295	-359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGCGGCCGGGAAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	106676849	106670749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828
ENSMUSG00000017765.18_106670907_106677235_1	chr8	-	1869	14	ISM	ENSMUSG00000017765.18	ENST00000541864.6	3585	24	13909	516	13909	-516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCTTTTGTGTAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	106677235	106670906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136
ENSMUSG00000017765.18_106671182_106677374_1	chr8	-	1754	14	ISM	ENSMUSG00000017765.18	ENST00000541864.6	3585	24	13770	791	13770	-791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCGGGAGCTGGTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	106677374	106671181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327
ENSMUSG00000017765.18_106671219_106677439_1	chr8	-	1782	14	ISM	ENSMUSG00000017765.18	ENST00000541864.6	3585	24	13705	828	13705	-828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGAGCCCTGGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	106677439	106671218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327
ENSMUSG00000017765.18_106671277_106678100_1	chr8	-	1824	15	ISM	ENSMUSG00000017765.18	ENST00000541864.6	3585	24	13044	886	13044	-886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGAGTCTGTGGCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	106678100	106671276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053
ENSMUSG00000017765.18_106671313_106678184_1	chr8	-	1872	15	ISM	ENSMUSG00000017765.18	ENST00000541864.6	3585	24	12960	922	12960	-922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTTAGGCTGGAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	106678184	106671312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053
ENSMUSG00000017765.18_106671806_106678148_1	chr8	-	1771	14	ISM	ENSMUSG00000017765.18	ENST00000541864.6	3585	24	12996	1415	12996	-1415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCAGATGAGGTTGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	106678148	106671805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053
ENSMUSG00000017765.18_106671842_106678331_1	chr8	-	1918	14	ISM	ENSMUSG00000017765.18	ENST00000541864.6	3585	24	12813	1451	12813	-1451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACACTGATGATGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	106678331	106671841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053
ENSMUSG00000017765.18_106672041_106678458_1	chr8	-	1800	14	ISM	ENSMUSG00000017765.18	ENST00000541864.6	3585	24	12686	1650	12686	-1650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGAAGGATCTGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	106678458	106672040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411
ENSMUSG00000017765.18_106673323_106682310_1	chr8	-	1850	14	ISM	ENSMUSG00000017765.18	ENST00000541864.6	3585	24	8834	2932	8834	-2932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGGCCAGGGGTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	106682310	106673322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212
ENSMUSG00000017765.18_106673468_106686019_1	chr8	-	1784	15	ISM	ENSMUSG00000017765.18	ENST00000541864.6	3585	24	5125	3077	5125	-3077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGACGAAGATCTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	106686019	106673467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989
ENSMUSG00000017765.18_106673688_106686121_1	chr8	-	1863	14	ISM	ENSMUSG00000017765.18	ENST00000541864.6	3585	24	5023	3297	5023	-3297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCGCGCCCGCAATGA	NA	NA	NA	NA	NA	NA	NA	NA	106686121	106673687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989
ENSMUSG00000017765.18_106674124_106687402_1	chr8	-	1853	14	ISM	ENSMUSG00000017765.18	ENST00000541864.6	3585	24	3742	3733	3742	-3733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAAGGGCCAGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	106687402	106674123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307
ENSMUSG00000017765.18_106674484_106691052_1	chr8	-	1760	14	ISM	ENSMUSG00000017765.18	ENST00000541864.6	3585	24	92	4093	92	-4093	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGCCTGCTGGACGCC	NA	NA	NA	NA	NA	NA	NA	NA	106691052	106674483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106691025
ENSMUSG00000017774.20_75546535_75551078_1	chr11	+	773	6	ISM	ENSMUSG00000017774.20	ENST00000575158.5	4539	32	9	13658	9	-13656	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGTCTTTTACCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	75546534	75551078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75546674_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996
ENSMUSG00000017774.20_75546585_75551136_1	chr11	+	781	6	ISM	ENSMUSG00000017774.20	ENST00000575158.5	4539	32	59	13600	59	-13598	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAACGGAACCCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	75546584	75551136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75546674_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996
ENSMUSG00000017774.20_75548579_75551994_1	chr11	+	861	7	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	1880	12740	1880	-12740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGACTCTGACTGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	75548578	75551994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922
ENSMUSG00000017774.20_75549178_75552440_1	chr11	+	865	7	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	2479	12294	2479	-12294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCACTCGGTCCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	75549177	75552440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320
ENSMUSG00000017774.20_75549329_75552613_1	chr11	+	768	8	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	2630	12121	2630	-12121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCTTTGAAGTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	75549328	75552613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559
ENSMUSG00000017774.20_75549463_75552953_1	chr11	+	857	8	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	2764	11781	2764	-11781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGTGTGTCGGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	75549462	75552953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847
ENSMUSG00000017774.20_75550995_75553141_1	chr11	+	857	8	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	4296	11593	4296	-11593	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTCCTCTGCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	75550994	75553141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060
ENSMUSG00000017774.20_75551112_75553454_1	chr11	+	797	9	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	4413	11280	4413	-11280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACACTGTCAAGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	75551111	75553454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397
ENSMUSG00000017774.20_75551257_75556438_1	chr11	+	864	9	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	4558	8296	4558	-8296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGATCCTGATGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	75551256	75556438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343
ENSMUSG00000017774.20_75552403_75559287_1	chr11	+	781	10	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	5704	5447	5704	-5447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAATCTGCGCGTGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	75552402	75559287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235
ENSMUSG00000017774.20_75552845_75559947_1	chr11	+	843	9	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	6146	4787	6146	-4787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTAGGGCCTGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	75552844	75559947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833
ENSMUSG00000017774.20_75553060_75560100_1	chr11	+	812	9	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	6361	4634	6361	-4634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGAGACTCGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	75553059	75560100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023
ENSMUSG00000017774.20_75559042_75562037_1	chr11	+	797	9	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	12343	2697	12343	-2697	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTGAAATTTTCAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	75559041	75562037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018
ENSMUSG00000017774.20_75559235_75562261_1	chr11	+	858	9	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	12536	2473	12536	-2473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAACCTGCTGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	75559234	75562261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205
ENSMUSG00000017774.20_75559832_75562553_1	chr11	+	882	9	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	13133	2181	13133	-2181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCAGAGGCCTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	75559831	75562553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412
ENSMUSG00000017774.20_75560021_75562701_1	chr11	+	835	9	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	13322	2033	13322	-2033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCCCTTCAGGGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	75560020	75562701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630
ENSMUSG00000017774.20_75560604_75562881_1	chr11	+	856	9	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	13905	1853	13905	-1853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGCACGTGGGGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	75560603	75562881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783
ENSMUSG00000017774.20_75560972_75563451_1	chr11	+	800	9	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	14273	1283	14273	-1283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCGGTGATGAAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	75560971	75563451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ENSMUSG00000017774.20_75562097_75563750_1	chr11	+	792	7	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	15398	984	15398	-984	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTGAGATTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	75562096	75563750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ENSMUSG00000017774.20_75562480_75563899_1	chr11	+	802	5	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	15781	835	15781	-835	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTCTGGCCAAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	75562479	75563899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ENSMUSG00000017774.20_75562680_75564019_1	chr11	+	804	4	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	15981	715	15981	-715	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATGTCCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	75562679	75564019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75562702_75562783_75562882_75562977_75563078_75563435
ENSMUSG00000017776.16_75570261_75596210_1	chr11	+	2615	3	FSM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	151	1524	124	-681	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAACAAAAACAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	75570260	75596210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_75570491_75583022_75583389_75594191
ENSMUSG00000017776.16_75570368_75596254_1	chr11	+	2552	3	FSM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	258	1480	231	-637	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAAAACACTTCTTAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	75570367	75596254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_75570491_75583022_75583389_75594191
ENSMUSG00000017776.16_75570368_75596335_1	chr11	+	2633	3	FSM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	258	1399	231	-556	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTCACTATATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	75570367	75596335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_75570491_75583022_75583389_75594191
ENSMUSG00000017776.16_75583096_75596526_1	chr11	+	2628	2	ISM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	12986	1208	12959	-365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTCAGATGCGTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	75583095	75596526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75583389_75594191
ENSMUSG00000017776.16_75583171_75596578_1	chr11	+	2605	2	ISM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	13061	1156	13034	-313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTATGTTTTATATAATC	NA	NA	NA	NA	NA	NA	NA	NA	75583170	75596578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75583389_75594191
ENSMUSG00000017776.16_75583304_75596718_1	chr11	+	2612	2	ISM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	13194	1016	13167	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATTAATGGTTTGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	75583303	75596718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75583389_75594191
ENSMUSG00000017778.15_86192935_86195023_1	chr13	-	533	3	NNC	ENSMUSG00000017778.15	novel	540	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGCCTCGTCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	86195023	86192934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_86193021_86193845_86193989_86194719
ENSMUSG00000017781.18_75478985_75517277_1	chr11	+	1338	11	NIC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	40	-279	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTATTTAAGCTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	75478984	75517277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494307_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ENSMUSG00000017781.18_75489066_75517556_1	chr11	+	1341	9	NIC	ENSMUSG00000017781.18	novel	1665	12	NA	NA	10121	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCATCTCTGGTTAATAT	NA	NA	NA	NA	NA	NA	NA	NA	75489065	75517556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_75489155_75494214_75494316_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ENSMUSG00000017801.16_100978130_100982194_1	chr11	+	1122	8	FSM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	4	839	4	-839	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAATGTTGAACCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	100978129	100982194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUSG00000017801.16_100978278_100982232_1	chr11	+	1012	8	FSM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	152	801	152	-801	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCTCTAGGACAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	100978277	100982232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUSG00000017801.16_100979057_100982344_1	chr11	+	1014	6	ISM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	931	689	931	-689	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTGCCTCTGCTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	100979056	100982344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUSG00000017801.16_100979426_100982553_1	chr11	+	1126	5	ISM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	1300	480	1300	-480	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATGTTCTGCTGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	100979425	100982553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUSG00000017801.16_100979495_100982663_1	chr11	+	1167	5	ISM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	1369	370	1369	-370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTCTAAATACCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	100979494	100982663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUSG00000017801.16_100980488_100982844_1	chr11	+	1118	2	ISM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	2362	189	2362	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGGTAGGCCAGGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	100980487	100982844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100980696_100981934
ENSMUSG00000017817.12_163179275_163239332_1	chr2	-	2561	6	FSM	ENSMUSG00000017817.12	ENSMUST00000017961.11	4211	6	537	1113	471	-1113	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGGGAGGGGTGCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	163239332	163179274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_163179845_163180524_163180620_163181152_163181893_163183381_163183501_163217523_163218296_163239067
ENSMUSG00000017831.9_53786315_53813664_1	chr17	+	1269	6	FSM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	53	1044	53	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGTGCAGGGGAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	53786314	53813664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_53786637_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ENSMUSG00000017831.9_53790919_53814019_1	chr17	+	1232	5	ISM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	4657	689	63	356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAACCGATAAATGCATT	NA	NA	NA	NA	NA	NA	NA	NA	53790918	53814019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ENSMUSG00000017831.9_53790973_53814068_1	chr17	+	1227	5	ISM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	4711	640	117	405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTTAAAAAGTGGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	53790972	53814068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ENSMUSG00000017831.9_53791027_53814123_1	chr17	+	1228	5	ISM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	4765	585	171	460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTCCATAGAGGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	53791026	53814123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ENSMUSG00000017831.9_53805415_53814321_1	chr17	+	1198	3	ISM	ENSMUSG00000017831.9	ENST00000422242.1	897	5	14559	-658	14559	-387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAAAATGTACAGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	53805414	53814321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_53805539_53807403_53807498_53813341
ENSMUSG00000017831.9_53805453_53814387_1	chr17	+	1226	3	ISM	ENSMUSG00000017831.9	ENST00000422242.1	897	5	14597	-724	14597	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTCTTACATGGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	53805452	53814387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_53805539_53807403_53807498_53813341
ENSMUSG00000017831.9_53805504_53814441_1	chr17	+	1229	3	ISM	ENSMUSG00000017831.9	ENST00000422242.1	897	5	14648	-778	14648	-267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTATTACAATGTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	53805503	53814441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_53805539_53807403_53807498_53813341
ENSMUSG00000017837.13_100513702_100517731_1	chr11	+	1395	4	FSM	ENSMUSG00000017837.13	ENSMUST00000017981.10	2097	4	0	702	0	106	multi-exon	FALSE	canonical	NA	NA	NA	NA	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGAGCGTCAGTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	100513701	100517731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_100513835_100515017_100515126_100515768_100516011_100516819
ENSMUSG00000017837.13_100513774_100517779_1	chr11	+	1371	4	FSM	ENSMUSG00000017837.13	ENSMUST00000017981.10	2097	4	72	654	72	154	multi-exon	FALSE	canonical	NA	NA	NA	NA	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTAGAGCCACGGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	100513773	100517779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_100513835_100515017_100515126_100515768_100516011_100516819
ENSMUSG00000017837.13_100513807_100517851_1	chr11	+	1410	4	FSM	ENSMUSG00000017837.13	ENSMUST00000017981.10	2097	4	105	582	105	226	multi-exon	FALSE	canonical	NA	NA	NA	NA	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCCACCCTCTTTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	100513806	100517851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_100513835_100515017_100515126_100515768_100516011_100516819
ENSMUSG00000017837.13_100515016_100517096_1	chr11	+	746	3	FSM	ENSMUSG00000017837.13	ENST00000316082.4	746	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGATGGGTGGCGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	100515015	100517096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_100515126_100515768_100516061_100516752
ENSMUSG00000017837.13_100515045_100516951_1	chr11	+	287	3	FSM	ENSMUSG00000017837.13	ENST00000449471.8	461	3	29	145	29	-145	multi-exon	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGAGCCTTTCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	100515044	100516951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_100515126_100515768_100515843_100516819
ENSMUSG00000017843.15_110452173_110519264_1	chr12	+	855	7	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	1	18858	0	-18858	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGAAGGTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	110452172	110519264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218
ENSMUSG00000017843.15_110452293_110527786_1	chr12	+	907	9	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	121	10336	0	-10336	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTCTTAAATGAATTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	110452292	110527786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731
ENSMUSG00000017843.15_110489002_110527869_1	chr12	+	819	8	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	36830	10253	36709	-10253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCAAATGTGTTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	110489001	110527869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731
ENSMUSG00000017843.15_110489065_110534213_1	chr12	+	841	9	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	36893	3909	36772	-3909	internal_fragment	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTGACAACGCAGCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	110489064	110534213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161
ENSMUSG00000017843.15_110512027_110535489_1	chr12	+	850	8	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	59855	2633	59734	-2633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGCTCCTCGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	110512026	110535489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387
ENSMUSG00000017843.15_110512046_110537178_1	chr12	+	880	9	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	59874	944	59753	-944	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTAGCCAAAGCGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	110512045	110537178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ENSMUSG00000017843.15_110512238_110546967_1	chr12	+	928	9	ISM	ENSMUSG00000017843.15	ENSMUST00000109832.3	4108	13	60065	2529	59945	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGAGCAGCACGCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	110512237	110546967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ENSMUSG00000017843.15_110512245_110537202_1	chr12	+	788	8	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	60073	920	59952	-920	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTACTAAAAAAGAGAGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	110512244	110537202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ENSMUSG00000017843.15_110512300_110537345_1	chr12	+	876	8	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	60128	777	60007	-777	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCTCTTGTATAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	110512299	110537345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ENSMUSG00000017843.15_110527732_110547238_1	chr12	+	878	5	ISM	ENSMUSG00000017843.15	ENSMUST00000109832.3	4108	13	75559	2258	75439	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAAGTCAGAGCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	110527731	110547238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ENSMUSG00000017843.15_110527737_110537491_1	chr12	+	758	4	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	75565	631	75444	-631	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTCATAGATGCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	110527736	110537491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110527903_110534161_110534290_110535387_110535490_110537129
ENSMUSG00000017843.15_110527777_110537555_1	chr12	+	782	4	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	75605	567	75484	-567	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGGGGAGGCAGATGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	110527776	110537555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110527903_110534161_110534290_110535387_110535490_110537129
ENSMUSG00000017843.15_110527838_110537616_1	chr12	+	782	4	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	75666	506	75545	-506	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTCTACCCTAGCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	110527837	110537616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110527903_110534161_110534290_110535387_110535490_110537129
ENSMUSG00000017843.15_110534162_110547471_1	chr12	+	940	4	ISM	ENSMUSG00000017843.15	ENSMUST00000109832.3	4108	13	81989	2025	81869	177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTTCTAGCTGCCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	110534161	110547471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110534290_110535387_110535490_110537129_110537203_110546834
ENSMUSG00000017843.15_110534216_110537720_1	chr12	+	767	3	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	82044	402	81923	-402	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTTAGGCTGGCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	110534215	110537720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110534290_110535387_110535490_110537129
ENSMUSG00000017843.15_110534256_110537782_1	chr12	+	789	3	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	82084	340	81963	-340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCCGAATGATCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	110534255	110537782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110534290_110535387_110535490_110537129
ENSMUSG00000017843.15_110535426_110547596_1	chr12	+	899	3	ISM	ENSMUSG00000017843.15	ENSMUST00000109832.3	4108	13	83253	1900	83133	302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCATAGTCTGTGGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	110535425	110547596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110535490_110537129_110537203_110546834
ENSMUSG00000017858.13_162859411_162865357_1	chr2	+	256	3	ISM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	137	22704	-9	-21913	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGAGTATTCATACAGA	NA	NA	NA	NA	NA	NA	NA	NA	162859410	162865357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162859454_162864294_162864420_162865269
ENSMUSG00000017858.13_162859439_162878524_1	chr2	+	870	10	ISM	ENSMUSG00000017858.13	ENST00000373030.8	1343	13	19	8746	19	-8746	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCGAGTGTGTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	162859438	162878524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162859486_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478
ENSMUSG00000017858.13_162864363_162882580_1	chr2	+	898	10	ISM	ENSMUSG00000017858.13	ENST00000373030.8	1343	13	4943	4690	4943	-4690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGCTCGTCCAACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	162864362	162882580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546
ENSMUSG00000017858.13_162865313_162884640_1	chr2	+	882	10	ISM	ENSMUSG00000017858.13	ENST00000373030.8	1343	13	5893	2630	5893	-2630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCCCCTGGAGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	162865312	162884640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610
ENSMUSG00000017858.13_162867347_162887168_1	chr2	+	866	10	ISM	ENSMUSG00000017858.13	ENST00000373030.8	1343	13	7927	102	7927	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGGAGTAACAAGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	162867346	162887168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ENSMUSG00000017861.12_162896607_162914587_1	chr2	+	774	6	ISM	ENSMUSG00000017861.12	ENST00000396863.8	2616	13	108	10951	0	-10951	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGCAGCGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	162896606	162914587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162896769_162901420_162901515_162904376_162904470_162906199_162906421_162910075_162910236_162914543
ENSMUSG00000017861.12_162896607_162914660_1	chr2	+	847	6	ISM	ENSMUSG00000017861.12	ENST00000396863.8	2616	13	108	10878	0	-10878	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATCTGGGAGAAGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	162896606	162914660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162896769_162901420_162901515_162904376_162904470_162906199_162906421_162910075_162910236_162914543
ENSMUSG00000017861.12_162896747_162914710_1	chr2	+	757	6	ISM	ENSMUSG00000017861.12	ENST00000396863.8	2616	13	248	10828	140	-10828	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACCAGGAGTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	162896746	162914710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162896769_162901420_162901515_162904376_162904470_162906199_162906421_162910075_162910236_162914543
ENSMUSG00000017861.12_162904440_162916340_1	chr2	+	741	5	ISM	ENSMUSG00000017861.12	ENST00000217026.5	2604	14	7857	9198	7833	-9198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAAGAACCCTCTACGGA	NA	NA	NA	NA	NA	NA	NA	NA	162904439	162916340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301
ENSMUSG00000017861.12_162906277_162916458_1	chr2	+	752	4	ISM	ENSMUSG00000017861.12	ENST00000217026.5	2604	14	9694	9080	9670	-9080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACTGAGTACCGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	162906276	162916458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162906421_162910075_162910236_162914543_162914835_162916301
ENSMUSG00000017861.12_162906357_162916536_1	chr2	+	750	4	ISM	ENSMUSG00000017861.12	ENST00000217026.5	2604	14	9774	9002	9750	-9002	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTAGCACTGAGTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	162906356	162916536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162906421_162910075_162910236_162914543_162914835_162916301
ENSMUSG00000017861.12_162914560_162917608_1	chr2	+	751	3	ISM	ENSMUSG00000017861.12	ENST00000217026.5	2604	14	17977	7930	17953	-7930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCCACTCCAGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	162914559	162917608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162914835_162916301_162916725_162917555
ENSMUSG00000017861.12_162914801_162921579_1	chr2	+	761	5	NIC	ENSMUSG00000017861.12	novel	2616	13	NA	NA	18194	-3959	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTGAGGATGACATGAG	NA	NA	NA	NA	NA	NA	NA	NA	162914800	162921579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_162914835_162916301_162916725_162917555_162917696_162919711_162919810_162921513
ENSMUSG00000017861.12_162916392_162922709_1	chr2	+	761	5	ISM	ENSMUSG00000017861.12	ENST00000217026.5	2604	14	19809	2829	19785	-2829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCTCTACCATGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	162916391	162922709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162916725_162917555_162917700_162919711_162919810_162921513_162921628_162922637
ENSMUSG00000017861.12_162916533_162924619_1	chr2	+	803	6	ISM	ENSMUSG00000017861.12	ENST00000217026.5	2604	14	19950	919	19926	-919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGCAGTAAACAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	162916532	162924619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162916725_162917555_162917700_162919711_162919810_162921513_162921628_162922637_162922743_162924469
ENSMUSG00000017861.12_162916665_162925129_1	chr2	+	715	7	ISM	ENSMUSG00000017861.12	ENST00000217026.5	2604	14	20082	409	20058	-409	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTCTTCATGCAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	162916664	162925129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162916725_162917555_162917700_162919711_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ENSMUSG00000017861.12_162916665_162925179_1	chr2	+	765	7	ISM	ENSMUSG00000017861.12	ENST00000217026.5	2604	14	20082	359	20058	-359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCACACATCTCGGACC	NA	NA	NA	NA	NA	NA	NA	NA	162916664	162925179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162916725_162917555_162917700_162919711_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ENSMUSG00000017861.12_162916665_162925262_1	chr2	+	848	7	ISM	ENSMUSG00000017861.12	ENST00000217026.5	2604	14	20082	276	20058	-276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGTAAGGTTAAAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	162916664	162925262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162916725_162917555_162917700_162919711_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ENSMUSG00000017861.12_162924552_162925676_1	chr2	+	659	2	ISM	ENSMUSG00000017861.12	ENST00000217026.5	2604	14	27969	-138	27945	138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGTGAGTATCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	162924551	162925676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162924620_162925085
ENSMUSG00000017897.19_165529532_165609049_1	chr2	+	1029	9	NNC	ENSMUSG00000017897.19	novel	1241	11	NA	NA	2	-3988	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGAACATCTACAGTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	165529531	165609049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_165529656_165555424_165555493_165557870_165558049_165566593_165566737_165573472_165573557_165603823_165603883_165605616_165605778_165608134_165608254_165608956
ENSMUSG00000017897.19_165529592_165609049_1	chr2	+	969	9	NNC	ENSMUSG00000017897.19	novel	1241	11	NA	NA	62	-3988	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGAACATCTACAGTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	165529591	165609049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_165529656_165555424_165555493_165557870_165558049_165566593_165566737_165573472_165573557_165603823_165603883_165605616_165605778_165608134_165608254_165608956
ENSMUSG00000017897.19_165529634_165609079_1	chr2	+	957	9	NNC	ENSMUSG00000017897.19	novel	1241	11	NA	NA	104	-3958	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTGGGCAGGGGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	165529633	165609079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_165529656_165555424_165555493_165557870_165558049_165566593_165566737_165573472_165573557_165603823_165603883_165605616_165605778_165608134_165608254_165608956
ENSMUSG00000017897.19_165555489_165611245_1	chr2	+	975	9	NNC	ENSMUSG00000017897.19	novel	1241	11	NA	NA	25959	-1792	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	821	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACGGGACCTCTCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	165555488	165611245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_165555493_165557866_165558049_165566593_165566737_165573472_165573557_165603823_165603883_165605616_165605778_165608134_165608254_165608956_165609079_165611144
ENSMUSG00000017897.19_165557957_165613012_1	chr2	+	940	9	NNC	ENSMUSG00000017897.19	novel	1241	11	NA	NA	28427	-25	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	963	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAACTGGAGTATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	165557956	165613012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_165558049_165566593_165566737_165573472_165573557_165603823_165603883_165605616_165605778_165608134_165608254_165608956_165609079_165611144_165611246_165612953
ENSMUSG00000017897.19_165557966_165613014_1	chr2	+	928	9	NNC	ENSMUSG00000017897.19	novel	1241	11	NA	NA	28436	-23	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACTGGAGTATCTATAG	NA	NA	NA	NA	NA	NA	NA	NA	165557965	165613014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_165558049_165566593_165566737_165573472_165573557_165603823_165603883_165605616_165605778_165608134_165608254_165608956_165609079_165611149_165611246_165612953
ENSMUSG00000017943.16_163280453_163296058_1	chr2	+	1115	4	FSM	ENSMUSG00000017943.16	ENST00000612599.4	2105	4	63	927	55	186	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAGAAAGCGAGAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	163280452	163296058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_163280646_163287953_163288147_163289418_163289593_163295503
ENSMUSG00000017943.16_163280453_163296084_1	chr2	+	1141	4	FSM	ENSMUSG00000017943.16	ENST00000612599.4	2105	4	63	901	55	212	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTCTTTTCTTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	163280452	163296084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_163280646_163287953_163288147_163289418_163289593_163295503
ENSMUSG00000017943.16_163280453_163296225_1	chr2	+	1542	6	FSM	ENSMUSG00000017943.16	ENST00000537864.5	2365	6	63	760	55	353	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTTCCCTCTTGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	163280452	163296225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_163280646_163287953_163288147_163289371_163289593_163292485_163292584_163293420_163293536_163295503
ENSMUSG00000017943.16_163280453_163296313_1	chr2	+	1630	6	FSM	ENSMUSG00000017943.16	ENST00000537864.5	2365	6	63	672	55	441	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGCCAGAGTCCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	163280452	163296313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_163280646_163287953_163288147_163289371_163289593_163292485_163292584_163293420_163293536_163295503
ENSMUSG00000017943.16_163280568_163296380_1	chr2	+	1582	6	FSM	ENSMUSG00000017943.16	ENST00000537864.5	2365	6	178	605	170	508	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGACAGCAGTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	163280567	163296380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_163280646_163287953_163288147_163289371_163289593_163292485_163292584_163293420_163293536_163295503
ENSMUSG00000017943.16_163287952_163296274_1	chr2	+	1140	3	ISM	ENSMUSG00000017943.16	ENST00000612599.4	2105	4	7562	711	7554	402	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACCCAACTCATCTAACC	NA	NA	NA	NA	NA	NA	NA	NA	163287951	163296274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163288147_163289418_163289593_163295503
ENSMUSG00000017943.16_163287952_163296509_1	chr2	+	1635	5	ISM	ENSMUSG00000017943.16	ENST00000537864.5	2365	6	7562	476	7554	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTAGAAATCCCGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	163287951	163296509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163288147_163289371_163289593_163292485_163292584_163293420_163293536_163295503
ENSMUSG00000017943.16_163288015_163296312_1	chr2	+	1115	3	ISM	ENSMUSG00000017943.16	ENST00000612599.4	2105	4	7625	673	7617	440	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAGCCAGAGTCCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	163288014	163296312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163288147_163289418_163289593_163295503
ENSMUSG00000017943.16_163288067_163296365_1	chr2	+	1116	3	ISM	ENSMUSG00000017943.16	ENST00000612599.4	2105	4	7677	620	7669	493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTGGACATGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	163288066	163296365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163288147_163289418_163289593_163295503
ENSMUSG00000017943.16_163289380_163296646_1	chr2	+	1569	4	ISM	ENSMUSG00000017943.16	ENSMUST00000018087.13	2220	6	8982	249	8982	-249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCCCTCACGGTCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	163289379	163296646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163289593_163292485_163292584_163293420_163293536_163295503
ENSMUSG00000017943.16_163289417_163296509_1	chr2	+	1182	2	ISM	ENSMUSG00000017943.16	ENST00000612599.4	2105	4	9027	476	9019	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTAGAAATCCCGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	163289416	163296509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163289593_163295503
ENSMUSG00000017943.16_163289442_163296707_1	chr2	+	1568	4	ISM	ENSMUSG00000017943.16	ENSMUST00000018087.13	2220	6	9044	188	9044	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCCCCCTTTTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	163289441	163296707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163289593_163292485_163292584_163293420_163293536_163295503
ENSMUSG00000017943.16_163289490_163296783_1	chr2	+	1596	4	ISM	ENSMUSG00000017943.16	ENSMUST00000018087.13	2220	6	9092	112	9092	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTTTCCTGTGCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	163289489	163296783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163289593_163292485_163292584_163293420_163293536_163295503
ENSMUSG00000017943.16_163292516_163296895_1	chr2	+	1575	3	ISM	ENSMUSG00000017943.16	ENSMUST00000018087.13	2220	6	12118	0	12118	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTGGTCCTACTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	163292515	163296895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163292584_163293420_163293536_163295503
ENSMUSG00000017950.17_163348856_163400928_1	chr2	+	483	5	ISM	ENSMUSG00000017950.17	ENST00000457232.5	1187	9	-2	10001	-2	-10001	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCACAGACGTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	163348855	163400928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163348908_163393496_163393672_163394479_163394575_163400104_163400212_163400874
ENSMUSG00000017950.17_163393606_163404483_1	chr2	+	469	5	ISM	ENSMUSG00000017950.17	ENSMUST00000018094.13	4356	10	4498	10342	4498	-6446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACCAAGAGGTCCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	163393605	163404483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163393672_163394479_163394575_163400104_163400212_163400874_163401031_163404438
ENSMUSG00000017950.17_163394509_163406146_1	chr2	+	490	5	ISM	ENSMUSG00000017950.17	ENSMUST00000018094.13	4356	10	5401	8679	5401	-4783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTGGTCCTGCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	163394508	163406146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163394575_163400104_163400212_163400874_163401031_163404438_163404527_163406073
ENSMUSG00000017950.17_163400165_163408083_1	chr2	+	490	5	ISM	ENSMUSG00000017950.17	ENSMUST00000018094.13	4356	10	11057	6742	11057	-2846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACAGGTGCAAGTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	163400164	163408083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163400212_163400874_163401031_163404438_163404527_163406073_163406230_163408040
ENSMUSG00000017950.17_163400916_163408166_1	chr2	+	485	4	ISM	ENSMUSG00000017950.17	ENSMUST00000018094.13	4356	10	11808	6659	11808	-2763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCCACGCTGCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	163400915	163408166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163401031_163404438_163404527_163406073_163406230_163408040
ENSMUSG00000017950.17_163404436_163408282_1	chr2	+	489	3	ISM	ENSMUSG00000017950.17	ENSMUST00000018094.13	4356	10	15328	6543	15328	-2647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCATGGAGATGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	163404435	163408282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163404527_163406073_163406230_163408040
ENSMUSG00000017950.17_163406072_163410929_1	chr2	+	518	3	ISM	ENSMUSG00000017950.17	ENSMUST00000018094.13	4356	10	16964	3896	16964	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCCCCGACCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	163406071	163410929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163406230_163408040_163408278_163410806
ENSMUSG00000017969.14_167044827_167082524_1	chr2	-	2100	10	NNC	ENSMUSG00000017969.14	novel	2107	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCGCAGTAGGTAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	167082524	167044826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_167045389_167048653_167048806_167049101_167049284_167050107_167050270_167056727_167056910_167063128_167063281_167065904_167066049_167067195_167067375_167069381_167069506_167082263
ENSMUSG00000017999.17_166866345_166868059_1	chr2	+	153	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	9232	8808	9115	326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAAGCCGCTCTTCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	166866344	166868059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166866478_166868039
ENSMUSG00000017999.17_166866400_166868107_1	chr2	+	146	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	9287	8760	9170	374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGCTCATCGACCACCT	NA	NA	NA	NA	NA	NA	NA	NA	166866399	166868107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166866478_166868039
ENSMUSG00000017999.17_166866462_166868156_1	chr2	+	133	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	9349	8711	9232	423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGAAGTGCTCATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	166866461	166868156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166866478_166868039
ENSMUSG00000017999.17_166868121_166869644_1	chr2	+	126	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	11008	7223	10891	1911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCGCCAGACCATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	166868120	166869644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166868191_166869588
ENSMUSG00000017999.17_166869623_166869882_1	chr2	+	160	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	12510	6985	12393	2149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGATCCGGCCTAATAGG	NA	NA	NA	NA	NA	NA	NA	NA	166869622	166869882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166869689_166869788
ENSMUSG00000017999.17_166869837_166870261_1	chr2	+	158	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	12724	6606	12607	2528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCATGCACATCCTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	166869836	166870261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166869931_166870197
ENSMUSG00000017999.17_166869903_166870315_1	chr2	+	146	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	12790	6552	12673	2582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTGTCACAGACCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	166869902	166870315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166869931_166870197
ENSMUSG00000017999.17_166870265_166871253_1	chr2	+	141	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	13152	5614	13035	3520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTCTTGACATTGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	166870264	166871253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166870352_166871199
ENSMUSG00000017999.17_166871224_166871499_1	chr2	+	153	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	14111	5368	13994	3766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGAGAGGAGGAGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	166871223	166871499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166871282_166871404
ENSMUSG00000017999.17_166875511_166875738_1	chr2	+	152	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	18398	1129	18281	-1129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGGCAATGCCTGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	166875510	166875738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166875578_166875653
ENSMUSG00000017999.17_166876021_166876607_1	chr2	+	144	3	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	18908	260	18791	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATATCCCTTCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	166876020	166876607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_166876044_166876392_166876465_166876558
ENSMUSG00000018001.19_143608256_143694188_1	chr5	+	1861	13	NNC	ENSMUSG00000018001.19	novel	1871	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTATATATGCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	143608255	143694188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_143608429_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688681_143692838_143692916_143692993_143693066_143693149_143693305_143693593
ENSMUSG00000018001.19_143608256_143694188_2	chr5	+	1867	13	FSM	ENSMUSG00000018001.19	ENSMUST00000116456.10	3738	13	54	1817	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTATATATGCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	143608255	143694188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_143608429_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688681_143692838_143692916_143692993_143693066_143693149_143693305_143693587
ENSMUSG00000018001.19_143608256_143694188_3	chr5	+	1861	13	NNC	ENSMUSG00000018001.19	novel	1871	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTATATATGCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	143608255	143694188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_143608429_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688681_143692838_143692916_143692999_143693066_143693149_143693305_143693587
ENSMUSG00000018001.19_143608256_143694188_4	chr5	+	1862	13	NNC	ENSMUSG00000018001.19	novel	1871	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTATATATGCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	143608255	143694188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_143608429_143670159_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688685_143692838_143692916_143692993_143693066_143693149_143693305_143693587
ENSMUSG00000018012.12_120612399_120614592_1	chr11	+	770	6	FSM	ENSMUSG00000018012.12	ENSMUST00000018156.12	1076	6	103	203	103	-203	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCTGGGATATAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	120612398	120614592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120612468_120613056_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
ENSMUSG00000018040.10_83000580_83001817_1	chr15	-	661	2	ISM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	5185	2946	5185	-2946	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCCTGGCAGAAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	83001817	83000579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83001173_83001749
ENSMUSG00000018040.10_83000627_83001836_1	chr15	-	633	2	ISM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	5166	2993	5166	-2993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTCGAGATCCAGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	83001836	83000626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83001173_83001749
ENSMUSG00000018040.10_83000763_83002300_1	chr15	-	632	3	ISM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	4702	3129	4702	-3129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAGGCCCTTTGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	83002300	83000762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83001173_83001749_83001949_83002277
ENSMUSG00000018040.10_83000864_83003415_1	chr15	-	636	4	ISM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	3587	3230	3587	-3230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTTATTTCCACCACT	NA	NA	NA	NA	NA	NA	NA	NA	83003415	83000863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385
ENSMUSG00000018040.10_83000968_83004158_1	chr15	-	686	5	ISM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	2844	3334	2844	-3334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCCTAGAAAGACACTCC	NA	NA	NA	NA	NA	NA	NA	NA	83004158	83000967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092
ENSMUSG00000018040.10_83001052_83004183_1	chr15	-	627	5	ISM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	2819	3418	2819	-3418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCCCACACTTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	83004183	83001051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092
ENSMUSG00000018040.10_83001108_83006057_1	chr15	-	631	6	ISM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	945	3474	945	-3474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAAATTCCGACCCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	83006057	83001107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032
ENSMUSG00000018040.10_83001833_83006952_1	chr15	-	691	6	ISM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	50	4199	50	-4199	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCGAGAAGGAGAAACGGA	NA	NA	NA	NA	NA	NA	NA	NA	83006952	83001832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
ENSMUSG00000018040.10_83001931_83007002_1	chr15	-	643	6	ISM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	0	4297	0	-4297	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGGAGGGAGTACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	83007002	83001930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
ENSMUSG00000018042.19_83037695_83043129_1	chr15	-	1332	2	ISM	ENSMUSG00000018042.19	ENSMUST00000162834.3	1982	9	11249	0	11249	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCAGCGTTTCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	83043129	83037694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83038924_83043026
ENSMUSG00000018042.19_83038331_83044622_1	chr15	-	863	4	ISM	ENSMUSG00000018042.19	ENSMUST00000162834.3	1982	9	9756	636	9756	-636	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAGAGAGAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	83044622	83038330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538
ENSMUSG00000018042.19_83038453_83045151_1	chr15	-	871	5	ISM	ENSMUSG00000018042.19	ENSMUST00000162834.3	1982	9	9227	758	9227	-758	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	NA	NA	NA	NA	NA	NA	NA	NA	83045151	83038452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021
ENSMUSG00000018042.19_83038677_83046486_1	chr15	-	808	7	ISM	ENSMUSG00000018042.19	ENSMUST00000162834.3	1982	9	7892	982	7892	-982	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTGTCGCTCACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	83046486	83038676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432
ENSMUSG00000018042.19_83038854_83056366_1	chr15	-	836	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	427	1159	427	-1159	multi-exon	FALSE	canonical	NA	NA	NA	NA	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCTGATACTGATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	83056366	83038853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ENSMUSG00000018042.19_83038905_83056419_1	chr15	-	838	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	374	1210	374	-1210	multi-exon	FALSE	canonical	NA	NA	NA	NA	1119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCGTGAATGAGGAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	83056419	83038904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ENSMUSG00000018042.19_83045021_83056793_1	chr15	-	924	5	ISM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	0	7326	0	-3756	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGGAGCAGGTACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	83056793	83045020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ENSMUSG00000018102.6_23868182_23876248_1	chr13	+	513	2	FSM	ENSMUSG00000018102.6	ENSMUST00000018246.6	1156	2	0	643	0	-643	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCATAGTTTCAGAACTC	NA	NA	NA	NA	NA	NA	NA	NA	23868181	23876248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_23868605_23876158
ENSMUSG00000018160.16_98043402_98051993_1	chr11	-	821	4	ISM	ENSMUSG00000018160.16	ENST00000394287.7	2815	18	32122	419	31788	-419	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGAGCCAGTGGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	98051993	98043401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98043952_98049154_98049296_98051762_98051869_98051969
ENSMUSG00000018160.16_98043537_98054783_1	chr11	-	916	5	ISM	ENSMUSG00000018160.16	ENST00000394287.7	2815	18	29332	554	28998	-554	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTCGAGGTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	98054783	98043536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98043952_98049154_98049296_98051762_98051869_98051969_98052066_98054625
ENSMUSG00000018160.16_98043591_98054783_1	chr11	-	862	5	ISM	ENSMUSG00000018160.16	ENST00000394287.7	2815	18	29332	608	28998	-608	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGACAAAAATCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	98054783	98043590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98043952_98049154_98049296_98051762_98051869_98051969_98052066_98054625
ENSMUSG00000018160.16_98043645_98054805_1	chr11	-	830	5	ISM	ENSMUSG00000018160.16	ENST00000394287.7	2815	18	29310	662	28976	-662	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTCTTTTTTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	98054805	98043644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98043952_98049154_98049296_98051762_98051869_98051969_98052066_98054625
ENSMUSG00000018160.16_98043837_98057650_1	chr11	-	905	7	ISM	ENSMUSG00000018160.16	ENST00000394287.7	2815	18	26465	854	26131	-854	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCACCCTGCCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	98057650	98043836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98043952_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524
ENSMUSG00000018160.16_98049246_98060220_1	chr11	-	842	8	ISM	ENSMUSG00000018160.16	ENSMUST00000018304.7	5845	17	23561	4172	23561	-4172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATACAGGCTGACACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	98060220	98049245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188
ENSMUSG00000018160.16_98051815_98061796_1	chr11	-	821	8	ISM	ENSMUSG00000018160.16	ENSMUST00000018304.7	5845	17	21985	6741	21985	-6741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGATGCACTAATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	98061796	98051814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773
ENSMUSG00000018160.16_98051970_98062596_1	chr11	-	893	8	ISM	ENSMUSG00000018160.16	ENSMUST00000018304.7	5845	17	21185	6896	21185	-6896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTGTGGGTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	98062596	98051969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521
ENSMUSG00000018160.16_98054626_98069966_1	chr11	-	898	9	ISM	ENSMUSG00000018160.16	ENSMUST00000018304.7	5845	17	13815	9552	13815	-9552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTCTCTTTCCTTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	98069966	98054625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937
ENSMUSG00000018160.16_98054756_98070925_1	chr11	-	851	10	ISM	ENSMUSG00000018160.16	ENSMUST00000018304.7	5845	17	12856	9682	12856	-9682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACACTGGTCAGCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	98070925	98054755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842
ENSMUSG00000018160.16_98057081_98071134_1	chr11	-	885	10	ISM	ENSMUSG00000018160.16	ENSMUST00000018304.7	5845	17	12647	12007	12647	-12007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTAGGCCCTGTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	98071134	98057080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079
ENSMUSG00000018160.16_98057591_98080051_1	chr11	-	822	11	ISM	ENSMUSG00000018160.16	ENSMUST00000018304.7	5845	17	3730	12517	3730	-12517	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAAATTTCCCCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	98080051	98057590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007
ENSMUSG00000018160.16_98058406_98083945_1	chr11	-	826	11	ISM	ENSMUSG00000018160.16	ENSMUST00000092735.12	2627	18	141	15426	141	-13332	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGTACAAACTCCCAATT	NA	NA	NA	NA	NA	NA	NA	NA	98083945	98058405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ENSMUSG00000018160.16_98060189_98084086_1	chr11	-	916	10	ISM	ENSMUSG00000018160.16	ENSMUST00000092735.12	2627	18	0	17209	0	-15115	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGTGTTGTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	98084086	98060188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ENSMUSG00000018167.11_98263102_98267360_1	chr11	+	322	5	ISM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	13908	4565	13908	-4565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTCCTGGCCTGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	98263101	98267360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98263169_98265905_98265984_98266301_98266380_98266500_98266555_98267315
ENSMUSG00000018167.11_98266506_98267931_1	chr11	+	307	4	ISM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	17312	3994	17312	-3994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTCTGCCCAGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	98266505	98267931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98266555_98267315_98267434_98267577_98267677_98267890
ENSMUSG00000018167.11_98268303_98269643_1	chr11	+	305	4	ISM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	19109	2282	19109	-2282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCACCCAGGTCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	98268302	98269643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98268369_98268981_98269045_98269160_98269257_98269563
ENSMUSG00000018167.11_98269565_98271333_1	chr11	+	328	4	ISM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	20371	592	20371	-592	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTGCCTTTCACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	98269564	98271333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98269644_98269719_98269825_98270798_98270893_98271283
ENSMUSG00000018168.9_98357805_98407710_1	chr11	-	1000	3	FSM	ENSMUSG00000018168.9	ENST00000377945.7	1053	3	53	0	53	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAATGCGAGGGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	98407710	98357804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_98358513_98381157_98381416_98407676
ENSMUSG00000018168.9_98357805_98407761_1	chr11	-	1195	5	FSM	ENSMUSG00000018168.9	ENST00000377958.6	1197	5	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAATGCGAGGGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	98407761	98357804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_98358513_98367752_98367870_98376399_98376517_98379677_98379846_98407676
ENSMUSG00000018168.9_98357805_98407761_2	chr11	-	1027	4	FSM	ENSMUSG00000018168.9	ENST00000377944.7	1029	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAATGCGAGGGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	98407761	98357804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_98358513_98367752_98367870_98376399_98376517_98407676
ENSMUSG00000018168.9_98357917_98379846_1	chr11	-	882	3	ISM	ENSMUSG00000018168.9	ENST00000351680.7	1331	5	27917	105	27917	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTGATCCCTTTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	98379846	98357916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98358513_98367752_98367870_98379677
ENSMUSG00000018168.9_98357942_98379739_1	chr11	-	750	3	ISM	ENSMUSG00000018168.9	ENST00000350532.7	1331	5	28024	130	28024	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCCACATGGGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	98379739	98357941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98358513_98376399_98376517_98379677
ENSMUSG00000018168.9_98358084_98407710_1	chr11	-	955	5	FSM	ENSMUSG00000018168.9	ENST00000467757.5	1280	5	53	272	53	-272	multi-exon	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCCTCGCTCTTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	98407710	98358083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_98358513_98367752_98367870_98376399_98376517_98381157_98381416_98407676
ENSMUSG00000018168.9_98358084_98407710_2	chr11	-	580	3	FSM	ENSMUSG00000018168.9	ENST00000394189.6	912	3	53	279	53	-272	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCCTCGCTCTTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	98407710	98358083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_98358513_98367752_98367870_98407676
ENSMUSG00000018168.9_98358201_98379847_1	chr11	-	482	2	ISM	ENSMUSG00000018168.9	ENST00000346243.7	1214	4	27916	389	27916	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACAGTGCCCAGGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	98379847	98358200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98358513_98379677
ENSMUSG00000018168.9_98358201_98407710_1	chr11	-	838	5	FSM	ENSMUSG00000018168.9	ENST00000467757.5	1280	5	53	389	53	-389	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACAGTGCCCAGGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	98407710	98358200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_98358513_98367752_98367870_98376399_98376517_98381157_98381416_98407676
ENSMUSG00000018168.9_98358201_98407761_1	chr11	-	514	3	FSM	ENSMUSG00000018168.9	ENST00000394189.6	912	3	2	396	2	-389	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACAGTGCCCAGGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	98407761	98358200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_98358513_98367752_98367870_98407676
ENSMUSG00000018168.9_98358258_98368014_1	chr11	-	419	3	ISM	ENSMUSG00000018168.9	ENST00000623724.3	1593	7	39749	453	39749	-446	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACGGATCCTCCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	98368014	98358257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98358513_98367752_98367870_98367967
ENSMUSG00000018168.9_98358306_98381244_1	chr11	-	462	3	ISM	ENSMUSG00000018168.9	ENST00000346243.7	1214	4	26519	494	26519	-494	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTACTCGGGCCGATATG	NA	NA	NA	NA	NA	NA	NA	NA	98381244	98358305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98358513_98379677_98379846_98381157
ENSMUSG00000018168.9_98358384_98376430_1	chr11	-	415	4	ISM	ENSMUSG00000018168.9	ENST00000623724.3	1593	7	31333	579	31333	-572	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCGCCCCTTAGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	98376430	98358383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98358513_98367752_98367870_98367967_98368106_98376399
ENSMUSG00000018168.9_98358400_98381331_1	chr11	-	455	3	ISM	ENSMUSG00000018168.9	ENST00000346243.7	1214	4	26432	588	26432	-588	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTAGGGGCTGAAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	98381331	98358399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98358513_98379677_98379846_98381157
ENSMUSG00000018168.9_98358426_98376489_1	chr11	-	432	4	ISM	ENSMUSG00000018168.9	ENST00000623724.3	1593	7	31274	621	31274	-614	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAGCCATCAATAACGCC	NA	NA	NA	NA	NA	NA	NA	NA	98376489	98358425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98358513_98367752_98367870_98367967_98368106_98376399
ENSMUSG00000018168.9_98358452_98381381_1	chr11	-	453	3	ISM	ENSMUSG00000018168.9	ENST00000346243.7	1214	4	26382	640	26382	-640	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGATGATGCAGACCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	98381381	98358451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98358513_98379677_98379846_98381157
ENSMUSG00000018168.9_98367759_98379705_1	chr11	-	394	4	ISM	ENSMUSG00000018168.9	ENST00000623724.3	1593	7	28058	9954	28058	-9947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCGGTAAGAACACACGG	NA	NA	NA	NA	NA	NA	NA	NA	98379705	98367758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98367870_98367967_98368106_98376399_98376517_98379677
ENSMUSG00000018168.9_98367851_98379846_1	chr11	-	443	4	ISM	ENSMUSG00000018168.9	ENST00000623724.3	1593	7	27917	10046	27917	-10039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAAAGCCGAGATGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	98379846	98367850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98367870_98367967_98368106_98376399_98376517_98379677
ENSMUSG00000018168.9_98367973_98381174_1	chr11	-	435	4	ISM	ENSMUSG00000018168.9	ENST00000623724.3	1593	7	26589	10168	26589	-10161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGTAATGACAGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	98381174	98367972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98368106_98376399_98376517_98379677_98379846_98381157
ENSMUSG00000018168.9_98368043_98381216_1	chr11	-	407	4	ISM	ENSMUSG00000018168.9	ENST00000623724.3	1593	7	26547	10238	26547	-10231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAACCGGCCTCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	98381216	98368042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98368106_98376399_98376517_98379677_98379846_98381157
ENSMUSG00000018168.9_98376442_98381339_1	chr11	-	425	3	ISM	ENSMUSG00000018168.9	ENST00000350532.7	1331	5	26424	18630	26424	-18630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCGAGCTTTTCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	98381339	98376441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98376517_98379677_98379846_98381157
ENSMUSG00000018168.9_98379676_98407710_1	chr11	-	462	3	ISM	ENSMUSG00000018168.9	ENST00000346243.7	1214	4	53	21864	53	-21864	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGGACATGGACATCC	NA	NA	NA	NA	NA	NA	NA	NA	98407710	98379675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98379846_98381157_98381416_98407676
ENSMUSG00000018171.10_86477379_86498051_1	chr11	-	158	3	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	76611	2688	76611	-2688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGAGGCGCAGCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	86498051	86477378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86477425_86492833_86492896_86498001
ENSMUSG00000018171.10_86498102_86526036_1	chr11	-	134	3	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	48626	23411	48626	-23411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTGGCTGGAATAACGT	NA	NA	NA	NA	NA	NA	NA	NA	86526036	86498101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86498119_86502167_86502249_86526000
ENSMUSG00000018171.10_86526008_86534348_1	chr11	-	150	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	40314	51317	40314	-51317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCACAAGTAAGAACACAAT	NA	NA	NA	NA	NA	NA	NA	NA	86534348	86526007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86526133_86534323
ENSMUSG00000018171.10_86526117_86534447_1	chr11	-	140	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	40215	51426	40215	-51426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGAGCTGCCTCCATAT	NA	NA	NA	NA	NA	NA	NA	NA	86534447	86526116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86526133_86534323
ENSMUSG00000018171.10_86534362_86551965_1	chr11	-	147	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	22697	59671	22697	-59671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCATCTCAAAAGTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	86551965	86534361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86534492_86551948
ENSMUSG00000018171.10_86534419_86552015_1	chr11	-	140	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	22647	59728	22647	-59728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCAGATTATCTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	86552015	86534418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86534492_86551948
ENSMUSG00000018171.10_86534474_86552062_1	chr11	-	132	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	22600	59783	22600	-59783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACATTAGCTGCTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	86552062	86534473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86534492_86551948
ENSMUSG00000018171.10_86552022_86555503_1	chr11	-	153	3	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	19159	77331	19159	-77331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGGATAGGCCTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	86555503	86552021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86552060_86554308_86554400_86555479
ENSMUSG00000018171.10_86554343_86555560_1	chr11	-	138	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	19102	79652	19102	-79652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACGTATTATGTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	86555560	86554342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86554400_86555479
ENSMUSG00000018171.10_86555595_86556705_1	chr11	-	124	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	17957	80904	17957	-80904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAGAAGGGATCGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	86556705	86555594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86555616_86556602
ENSMUSG00000018189.13_143653010_143683043_1	chr1	+	1691	11	NNC	ENSMUSG00000018189.13	novel	1696	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTGGATTATTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	143653009	143683043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_143653215_143659703_143659768_143661872_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
ENSMUSG00000018189.13_143653010_143683043_2	chr1	+	1690	11	NNC	ENSMUSG00000018189.13	novel	1696	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTGGATTATTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	143653009	143683043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674134_143674232_143675658_143675773_143677872_143677972_143682421
ENSMUSG00000018189.13_143653059_143677935_1	chr1	+	986	10	ISM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	40	5269	40	-5108	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGCACCAGCAGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	143653058	143677935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872
ENSMUSG00000018189.13_143670013_143682679_1	chr1	+	956	8	ISM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	16994	525	16994	-364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTCCATTCTTCAATTC	NA	NA	NA	NA	NA	NA	NA	NA	143670012	143682679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143682421
ENSMUSG00000018189.13_143674129_143683043_1	chr1	+	935	4	ISM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	21110	161	21110	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTGGATTATTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	143674128	143683043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_143674232_143675661_143675773_143677872_143677972_143682421
ENSMUSG00000018189.13_143677871_143683206_1	chr1	+	886	2	ISM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	24852	-2	24852	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTTACCTAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	143677870	143683206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_143677972_143682421
ENSMUSG00000018196.19_143615304_143622324_1	chr1	+	513	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	9	2815	9	-190	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTGGTTCATCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	143615303	143622324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
ENSMUSG00000018209.16_163921483_163938777_1	chr2	+	559	5	ISM	ENSMUSG00000018209.16	ENST00000372801.5	2013	12	5397	55390	5397	-55390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATGGCTGAAGGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	163921482	163938777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658
ENSMUSG00000018209.16_163928450_163940462_1	chr2	+	517	4	ISM	ENSMUSG00000018209.16	ENST00000372801.5	2013	12	12364	53705	12364	-53705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCAGAGAGCCACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	163928449	163940462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163928530_163930760_163930926_163938658_163938827_163940358
ENSMUSG00000018209.16_163930866_163941745_1	chr2	+	495	4	ISM	ENSMUSG00000018209.16	ENST00000372801.5	2013	12	14780	52422	14780	-52422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGGCTGCTCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	163930865	163941745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163930926_163938658_163938827_163940358_163940497_163941616
ENSMUSG00000018209.16_163938680_163942428_1	chr2	+	513	4	ISM	ENSMUSG00000018209.16	ENST00000372801.5	2013	12	22594	51739	-13441	-51739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTGAGCACGGTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	163938679	163942428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163938827_163940358_163940497_163941616_163941746_163942329
ENSMUSG00000018209.16_163940417_163996782_1	chr2	+	3744	5	ISM	ENSMUSG00000018209.16	ENSMUST00000018353.14	5232	11	24359	662	-11704	-662	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTACTCAGAGATGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	163940416	163996782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
ENSMUSG00000018209.16_163941640_163984183_1	chr2	+	512	4	ISM	ENSMUSG00000018209.16	ENST00000372801.5	2013	12	25554	9984	-10481	-9984	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGATACACTGAGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	163941639	163984183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163941746_163942329_163942517_163959888_163960047_163984122
ENSMUSG00000018209.16_163942418_163993755_1	chr2	+	510	4	NNC	ENSMUSG00000018209.16	novel	2013	12	NA	NA	-9703	-412	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCCCAGCCTTGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	163942417	163993755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_163942517_163959888_163960047_163984122_163984213_163993592
ENSMUSG00000018209.16_163959985_163993958_1	chr2	+	518	3	NNC	ENSMUSG00000018209.16	novel	2013	12	NA	NA	7864	-209	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAATTCTAGACCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	163959984	163993958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_163960047_163984122_163984213_163993592
ENSMUSG00000018217.13_63019808_63049463_1	chr11	+	913	5	FSM	ENSMUSG00000018217.13	ENSMUST00000108702.8	1822	5	0	909	0	71	multi-exon	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTACATAGGATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	63019807	63049463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_63019977_63023953_63024071_63025246_63025347_63041944_63042086_63049077
ENSMUSG00000018217.13_63022338_63025315_1	chr11	+	575	3	ISM	ENSMUSG00000018217.13	ENST00000675808.1	2076	5	40	25051	0	-23995	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAACACTGCTACTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	63022337	63025315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_63022481_63023707_63024071_63025246
ENSMUSG00000018217.13_63022338_63050001_1	chr11	+	1428	5	FSM	ENSMUSG00000018217.13	ENSMUST00000018361.10	1800	5	0	372	0	-356	multi-exon	FALSE	canonical	NA	NA	NA	NA	2719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCGATACAGCAGAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	63022337	63050001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_63022481_63023950_63024071_63025246_63025347_63041944_63042086_63049077
ENSMUSG00000018217.13_63025247_63050373_1	chr11	+	1396	2	FSM	ENSMUSG00000018217.13	ENST00000676161.1	1380	2	0	-16	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTCTCCCGGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	63025246	63050373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_63025347_63049077
ENSMUSG00000018217.13_63025247_63050373_2	chr11	+	1537	3	ISM	ENSMUSG00000018217.13	ENST00000674651.1	1745	5	1739	-11	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTCTCCCGGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	63025246	63050373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_63025347_63041944_63042086_63049077
ENSMUSG00000018217.13_63041944_63050373_1	chr11	+	1438	2	ISM	ENSMUSG00000018217.13	ENST00000676329.1	1621	3	16697	0	16697	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTCTCCCGGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	63041943	63050373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_63042086_63049077
ENSMUSG00000018239.10_53215506_53218245_1	chr11	+	217	2	FSM	ENSMUSG00000018239.10	ENST00000512933.1	197	2	-20	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCAAAGGTAGGTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	53215505	53218245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_53215573_53218095
ENSMUSG00000018239.10_53215506_53218245_2	chr11	+	216	2	NNC	ENSMUSG00000018239.10	novel	197	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCAAAGGTAGGTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	53215505	53218245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_53215573_53218096
ENSMUSG00000018239.10_53215506_53223417_1	chr11	+	504	3	NNC	ENSMUSG00000018239.10	novel	1267	4	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCTCTGTACACCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	53215505	53223417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_53215569_53218095_53218255_53223135
ENSMUSG00000018239.10_53215506_53223417_2	chr11	+	506	3	NNC	ENSMUSG00000018239.10	novel	1267	4	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCTCTGTACACCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	53215505	53223417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_53215569_53218100_53218255_53223128
ENSMUSG00000018239.10_53215506_53223417_3	chr11	+	511	3	FSM	ENSMUSG00000018239.10	ENST00000513848.5	492	3	-12	-7	0	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCTCTGTACACCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	53215505	53223417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_53215569_53218095_53218255_53223128
ENSMUSG00000018239.10_53218096_53223417_1	chr11	+	445	2	NNC	ENSMUSG00000018239.10	novel	197	2	NA	NA	2570	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCTCTGTACACCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	53218095	53223417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_53218259_53223135
ENSMUSG00000018239.10_53218096_53250966_1	chr11	+	505	3	NNC	ENSMUSG00000018239.10	novel	492	3	NA	NA	2570	26838	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACCCAAGGCTGGGGATA	NA	NA	NA	NA	NA	NA	NA	NA	53218095	53250966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_53218255_53223128_53223427_53250918
ENSMUSG00000018239.10_53218118_53223770_1	chr11	+	824	3	ISM	ENSMUSG00000018239.10	ENSMUST00000018383.10	1267	4	2612	358	2592	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAACTTTTTTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	53218117	53223770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53218255_53221513_53221559_53223128
ENSMUSG00000018239.10_53218227_53223825_1	chr11	+	770	3	ISM	ENSMUSG00000018239.10	ENSMUST00000018383.10	1267	4	2721	303	2701	-303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAACCAGGAAATCTATT	NA	NA	NA	NA	NA	NA	NA	NA	53218226	53223825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53218255_53221513_53221559_53223128
ENSMUSG00000018286.7_70416212_70417453_1	chr11	+	394	4	ISM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	0	1022	0	-1022	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGAATCATCATTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	70416211	70417453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369
ENSMUSG00000018286.7_70416212_70417466_1	chr11	+	407	4	ISM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	0	1009	0	-1009	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCAGGCTGGGACCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	70416211	70417466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369
ENSMUSG00000018286.7_70416710_70418019_1	chr11	+	346	4	ISM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	498	456	498	-456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1421	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGGGGTATGATGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	70416709	70418019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70416779_70417119_70417252_70417369_70417500_70418004
ENSMUSG00000018286.7_70417119_70418149_1	chr11	+	408	3	ISM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	907	326	907	-326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACTCTGTGCTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	70417118	70418149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70417252_70417369_70417500_70418004
ENSMUSG00000018286.7_70417226_70418299_1	chr11	+	338	4	ISM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	1014	176	1014	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTGATCCGCTTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	70417225	70418299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70417252_70417369_70417500_70418004_70418150_70418262
ENSMUSG00000018286.7_70417461_70418475_1	chr11	+	397	3	ISM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	1249	0	1249	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2692	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACGTTTCTGTGTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	70417460	70418475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70417500_70418004_70418150_70418262
ENSMUSG00000018287.13_70554983_70555440_1	chr11	-	258	3	ISM	ENSMUSG00000018287.13	ENSMUST00000018431.13	1159	7	4802	386	4653	-368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACGCCTGCGGCAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	70555440	70554982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70555047_70555145_70555303_70555403
ENSMUSG00000018287.13_70555166_70560044_1	chr11	-	491	6	FSM	ENSMUSG00000018287.13	ENST00000575142.5	1091	6	49	551	49	-551	multi-exon	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAAGACCTATGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	70560044	70555165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70555303_70555403_70555494_70555608_70555694_70555813_70555903_70556122_70556191_70560022
ENSMUSG00000018287.13_70555608_70560044_1	chr11	-	265	4	ISM	ENSMUSG00000018287.13	ENST00000575142.5	1091	6	49	993	49	-993	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGCCTGCCGCCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	70560044	70555607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70555694_70555813_70555903_70556122_70556191_70560022
ENSMUSG00000018287.13_70556116_70560242_1	chr11	-	295	2	ISM	ENSMUSG00000018287.13	ENSMUST00000018431.13	1159	7	0	1519	0	-1501	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTGGCGAGAGCAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	70560242	70556115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70556191_70560022
ENSMUSG00000018293.5_70542676_70545470_1	chr11	-	855	3	NNC	ENSMUSG00000018293.5	novel	861	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14846	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGACCTGTGTTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	70545470	70542675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_70543042_70543612_70543806_70545174
ENSMUSG00000018322.11_163895460_163906964_1	chr2	-	1566	5	ISM	ENSMUSG00000018322.11	ENSMUST00000018466.4	2302	7	6058	0	6058	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTCTGACGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	163906964	163895459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811
ENSMUSG00000018322.11_163895460_163908536_1	chr2	-	1613	6	ISM	ENSMUSG00000018322.11	ENSMUST00000018466.4	2302	7	4486	0	4486	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTCTGACGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	163908536	163895459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489
ENSMUSG00000018322.11_163895723_163913022_1	chr2	-	1593	7	FSM	ENSMUSG00000018322.11	ENSMUST00000109384.10	1923	7	67	263	0	-263	multi-exon	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAACCCTTGGAGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	163913022	163895722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912832
ENSMUSG00000018322.11_163895758_163913022_1	chr2	-	1558	7	FSM	ENSMUSG00000018322.11	ENSMUST00000109384.10	1923	7	67	298	0	-298	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTAGTCCAGGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	163913022	163895757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912832
ENSMUSG00000018322.11_163895831_163913033_1	chr2	-	1496	7	FSM	ENSMUSG00000018322.11	ENSMUST00000109384.10	1923	7	56	371	-11	-371	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCATCTCCTCGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	163913033	163895830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912832
ENSMUSG00000018326.10_163837160_163853555_1	chr2	+	160	2	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	280	6953	280	-6953	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAAACTGGCTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	163837159	163853555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163837286_163853521
ENSMUSG00000018326.10_163837201_163853617_1	chr2	+	181	2	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	321	6891	321	-6891	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGCAGGGACACGAACT	NA	NA	NA	NA	NA	NA	NA	NA	163837200	163853617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163837286_163853521
ENSMUSG00000018326.10_163837263_163853659_1	chr2	+	161	2	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	383	6849	383	-6849	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCTGTTGCCTACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	163837262	163853659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163837286_163853521
ENSMUSG00000018326.10_163853741_163856012_1	chr2	+	171	2	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	16861	4496	16861	-4496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTCTGAAGTTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	163853740	163856012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163853825_163855925
ENSMUSG00000018326.10_163853812_163857203_1	chr2	+	190	3	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	16932	3305	16932	-3305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATGCAGCCTACACA	NA	NA	NA	NA	NA	NA	NA	NA	163853811	163857203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163853825_163855925_163856050_163857150
ENSMUSG00000018326.10_163857196_163858096_1	chr2	+	193	2	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	20316	2412	20316	-2412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTCAGGGACAATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	163857195	163858096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163857315_163858022
ENSMUSG00000018326.10_163857257_163858617_1	chr2	+	183	3	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	20377	1891	20377	-1891	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGATGCTGGAGAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	163857256	163858617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163857315_163858022_163858119_163858588
ENSMUSG00000018326.10_163858058_163858687_1	chr2	+	160	2	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	21178	1821	21178	-1821	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACATTATGTCCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	163858057	163858687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163858119_163858588
ENSMUSG00000018339.13_54793598_54798106_1	chr11	+	435	2	ISM	ENSMUSG00000018339.13	ENSMUST00000082430.11	1594	5	0	3097	0	-3097	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGCTCCCTCAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	54793597	54798106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_54793879_54797952
ENSMUSG00000018339.13_54793752_54799484_1	chr11	+	399	3	ISM	ENSMUSG00000018339.13	ENSMUST00000082430.11	1594	5	154	1719	154	-1719	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTCTCATGGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	54793751	54799484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_54793879_54797952_54798107_54799366
ENSMUSG00000018339.13_54799866_54800546_1	chr11	+	384	2	ISM	ENSMUSG00000018339.13	ENSMUST00000082430.11	1594	5	6268	657	6268	-657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGGAAGCCACATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	54799865	54800546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_54799966_54800262
ENSMUSG00000018340.14_54869934_54902623_1	chr11	-	2267	23	ISM	ENSMUSG00000018340.14	ENSMUST00000108883.10	2489	26	21648	0	21648	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	54902623	54869933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528
ENSMUSG00000018340.14_54869934_54902624_1	chr11	-	2262	22	NNC	ENSMUSG00000018340.14	novel	2471	25	NA	NA	21647	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	54902624	54869933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882204_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528
ENSMUSG00000018340.14_54869934_54904746_1	chr11	-	2337	23	NNC	ENSMUSG00000018340.14	novel	2471	25	NA	NA	19525	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	54904746	54869933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882259_54883108_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650
ENSMUSG00000018340.14_54869934_54904746_2	chr11	-	2337	23	NNC	ENSMUSG00000018340.14	novel	2471	25	NA	NA	19525	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	54904746	54869933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875990_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650
ENSMUSG00000018340.14_54869934_54924241_1	chr11	-	2436	25	NNC	ENSMUSG00000018340.14	novel	2471	25	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	54924241	54869933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894859_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ENSMUSG00000018340.14_54869934_54924241_2	chr11	-	2436	25	NNC	ENSMUSG00000018340.14	novel	2471	25	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	54924241	54869933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_54870348_54872441_54872565_54874123_54874178_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ENSMUSG00000018340.14_54870112_54904674_1	chr11	-	2113	24	ISM	ENSMUSG00000018340.14	ENSMUST00000108883.10	2489	26	19597	178	19597	-178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTATCCCTCCCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	54904674	54870111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650
ENSMUSG00000018340.14_54870272_54924241_1	chr11	-	2121	26	FSM	ENSMUSG00000018340.14	ENSMUST00000108883.10	2489	26	30	338	30	-338	multi-exon	FALSE	canonical	NA	NA	NA	NA	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCCCCTCTACCAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	54924241	54870271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ENSMUSG00000018341.13_67269208_67293319_1	chr6	-	997	4	ISM	ENSMUSG00000018341.13	ENST00000541374.6	2087	10	44486	6	23359	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGAGTAATGAGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	67293319	67269207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_67269721_67275891_67276030_67285941_67286143_67293174
ENSMUSG00000018341.13_67269408_67328311_1	chr6	-	1038	6	ISM	ENSMUSG00000018341.13	ENST00000541374.6	2087	10	9494	206	9494	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTACCTTCCTAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	67328311	67269407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_67269721_67275891_67276030_67285941_67286143_67293174_67293392_67313670_67313751_67328222
ENSMUSG00000018341.13_67269566_67331755_1	chr6	-	989	7	ISM	ENSMUSG00000018341.13	ENST00000541374.6	2087	10	6050	364	6050	-364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTCCAAGCAAGATGCAA	NA	NA	NA	NA	NA	NA	NA	NA	67331755	67269565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_67269721_67275891_67276030_67285941_67286143_67293174_67293392_67313670_67313751_67328222_67328374_67331708
ENSMUSG00000018341.13_67269669_67333597_1	chr6	-	1014	8	ISM	ENSMUSG00000018341.13	ENST00000541374.6	2087	10	4208	467	4208	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCTGAGCCCCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	67333597	67269668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_67269721_67275891_67276030_67285941_67286143_67293174_67293392_67313670_67313751_67328222_67328374_67331708_67331852_67333565
ENSMUSG00000018341.13_67275977_67333719_1	chr6	-	999	7	ISM	ENSMUSG00000018341.13	ENST00000541374.6	2087	10	4086	6775	4086	-6775	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTGACATATGTCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	67333719	67275976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_67276030_67285941_67286143_67293174_67293392_67313670_67313751_67328222_67328374_67331708_67331852_67333565
ENSMUSG00000018341.13_67285942_67334698_1	chr6	-	1025	7	ISM	ENSMUSG00000018341.13	ENST00000541374.6	2087	10	3107	16740	3107	-16740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTCCCTACTCCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	67334698	67285941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_67286143_67293174_67293392_67313670_67313751_67328222_67328374_67331708_67331852_67333565_67333760_67334659
ENSMUSG00000018341.13_67286090_67337517_1	chr6	-	994	8	ISM	ENSMUSG00000018341.13	ENST00000541374.6	2087	10	288	16888	288	-16888	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGACCTGGCAGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	67337517	67286089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_67286143_67293174_67293392_67313670_67313751_67328222_67328374_67331708_67331852_67333565_67333760_67334659_67334775_67337476
ENSMUSG00000018341.13_67293266_67337661_1	chr6	-	994	7	ISM	ENSMUSG00000018341.13	ENST00000541374.6	2087	10	144	24064	144	-24064	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGGCTTGGACGGCATC	NA	NA	NA	NA	NA	NA	NA	NA	67337661	67293265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_67293392_67313670_67313751_67328222_67328374_67331708_67331852_67333565_67333760_67334659_67334775_67337476
ENSMUSG00000018341.13_67293321_67337716_1	chr6	-	994	7	ISM	ENSMUSG00000018341.13	ENST00000541374.6	2087	10	89	24119	89	-24119	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACACTGCAGAATACTA	NA	NA	NA	NA	NA	NA	NA	NA	67337716	67293320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_67293392_67313670_67313751_67328222_67328374_67331708_67331852_67333565_67333760_67334659_67334775_67337476
ENSMUSG00000018347.17_65705350_65713764_1	chr11	+	821	5	ISM	ENSMUSG00000018347.17	ENST00000454073.7	1672	6	63	5891	63	-5891	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGGTATCATAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	65705349	65713764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713656
ENSMUSG00000018347.17_65705525_65719129_1	chr11	+	908	6	FSM	ENSMUSG00000018347.17	ENST00000454073.7	1672	6	238	526	238	-526	multi-exon	FALSE	canonical	NA	NA	NA	NA	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTCTTTGGGAGAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	65705524	65719129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713656_65713765_65718867
ENSMUSG00000018347.17_65706743_65719252_1	chr11	+	879	5	ISM	ENSMUSG00000018347.17	ENST00000454073.7	1672	6	1456	403	1456	-403	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGGAATTCACAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	65706742	65719252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_65706952_65707314_65707407_65712755_65712841_65713656_65713765_65718867
ENSMUSG00000018347.17_65706743_65719422_1	chr11	+	1055	5	ISM	ENSMUSG00000018347.17	ENSMUST00000018491.8	2302	8	8673	643	1456	-233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTCTCAGGCTTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	65706742	65719422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_65706952_65707314_65707407_65712755_65712841_65713650_65713765_65718867
ENSMUSG00000018347.17_65707313_65719422_1	chr11	+	842	4	ISM	ENSMUSG00000018347.17	ENST00000454073.7	1672	6	2026	233	2026	-233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTCTCAGGCTTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	65707312	65719422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_65707407_65712755_65712841_65713656_65713765_65718867
ENSMUSG00000018347.17_65707313_65719655_1	chr11	+	1075	4	ISM	ENSMUSG00000018347.17	ENST00000454073.7	1672	6	2026	0	2026	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCCAGGTACTACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	65707312	65719655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_65707407_65712755_65712841_65713656_65713765_65718867
ENSMUSG00000018362.15_106879455_106881698_1	chr11	-	918	4	ISM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	8669	0	8497	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTTTTCTTAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	106881698	106879454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464
ENSMUSG00000018362.15_106879455_106881699_1	chr11	-	913	4	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	8496	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTTTTCTTAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	106881699	106879454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_-_106879800_106880149_106880300_106881014_106881198_106881464
ENSMUSG00000018362.15_106879455_106882826_1	chr11	-	1420	7	ISM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	7541	0	7369	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTTTTCTTAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	106882826	106879454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683
ENSMUSG00000018362.15_106879455_106882883_1	chr11	-	1477	7	ISM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	7484	0	7312	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTTTTCTTAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	106882883	106879454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683
ENSMUSG00000018362.15_106879455_106882939_1	chr11	-	1533	7	ISM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	7428	0	7256	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTTTTCTTAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	106882939	106879454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683
ENSMUSG00000018362.15_106879561_106881992_1	chr11	-	910	5	ISM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	8375	106	8203	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTACATACTCTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	106881992	106879560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894
ENSMUSG00000018362.15_106879629_106881992_1	chr11	-	836	5	NIC	ENSMUSG00000018362.15	novel	2074	11	NA	NA	8203	-174	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTTTTAAATGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	106881992	106879628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_-_106879800_106880149_106880300_106881014_106881198_106881464_106881699_106881894
ENSMUSG00000018362.15_106879629_106882059_1	chr11	-	909	5	ISM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	8308	174	8136	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTTTTAAATGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	106882059	106879628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894
ENSMUSG00000018362.15_106879629_106882059_2	chr11	-	902	5	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	8136	-174	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTTTTAAATGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	106882059	106879628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_106879806_106880149_106880293_106881014_106881198_106881464_106881699_106881894
ENSMUSG00000018362.15_106879740_106887404_1	chr11	-	1420	9	ISM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	2963	285	2791	-285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTCCTGGGACCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	106887404	106879739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334
ENSMUSG00000018362.15_106879786_106887459_1	chr11	-	1429	9	ISM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	2908	331	2736	-331	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCCAGAAACTACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	106887459	106879785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334
ENSMUSG00000018362.15_106882119_106882895_1	chr11	-	347	3	ISM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	7472	2664	7300	-2664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTCGAAACAAGAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	106882895	106882118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106882159_106882238_106882334_106882683
ENSMUSG00000018362.15_106887411_106890321_1	chr11	-	297	3	FSM	ENSMUSG00000018362.15	ENSMUST00000106768.2	541	3	-126	370	46	-370	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGCTGAAAAGAAGAAACG	NA	NA	NA	NA	NA	NA	NA	NA	106890321	106887410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_106887473_106888063_106888162_106890184
ENSMUSG00000018363.17_106759454_106759889_1	chr11	-	108	2	ISM	ENSMUSG00000018363.17	ENST00000398849.6	391	4	42	8913	42	-8913	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCATAAGAAGATCCATAAG	NA	NA	NA	NA	NA	NA	NA	NA	106759889	106759453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106759495_106759822
ENSMUSG00000018372.14_106683300_106690969_1	chr11	+	322	3	ISM	ENSMUSG00000018372.14	ENST00000556440.7	2514	19	1741	18649	1741	-18649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTGCAGTGCCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	106683299	106690969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106683411_106686948_106687060_106690869
ENSMUSG00000018372.14_106687007_106695875_1	chr11	+	326	4	ISM	ENSMUSG00000018372.14	ENST00000556440.7	2514	19	5448	13743	5448	-13743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACCTGAGGAAATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	106687006	106695875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106687060_106690869_106690970_106692288_106692405_106695818
ENSMUSG00000018372.14_106695887_106700075_1	chr11	+	307	3	ISM	ENSMUSG00000018372.14	ENST00000556440.7	2514	19	14328	9543	14328	-9543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTACCTAAACCTGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	106695886	106700075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106695948_106697067_106697256_106700017
ENSMUSG00000018372.14_106703311_106706347_1	chr11	+	330	4	ISM	ENSMUSG00000018372.14	ENST00000556440.7	2514	19	21752	3271	21752	-3271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTCTGACCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	106703310	106706347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106703362_106704586_106704693_106705443_106705563_106706293
ENSMUSG00000018372.14_106705496_106706634_1	chr11	+	312	3	ISM	ENSMUSG00000018372.14	ENST00000556440.7	2514	19	23937	2984	23937	-2984	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATGTCAAGAACAAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	106705495	106706634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106705563_106706293_106706464_106706559
ENSMUSG00000018372.14_106708705_106709489_1	chr11	+	304	3	ISM	ENSMUSG00000018372.14	ENST00000556440.7	2514	19	27146	129	27146	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCAGTTGGCTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	106708704	106709489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106708807_106709021_106709094_106709359
ENSMUSG00000018377.11_87964308_87969320_1	chr11	+	610	4	ISM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	5203	6235	5203	-6235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGGAAGCAGGTAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	87964307	87969320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87964578_87965487_87965552_87967016_87967201_87969228
ENSMUSG00000018378.14_88060498_88068151_1	chr11	+	559	2	ISM	ENSMUSG00000018378.14	ENSMUST00000018522.13	3180	11	70526	16815	70526	-16815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACCACCAGCGTACCACA	NA	NA	NA	NA	NA	NA	NA	NA	88060497	88068151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_88061001_88068095
ENSMUSG00000018378.14_88060861_88074199_1	chr11	+	530	4	ISM	ENSMUSG00000018378.14	ENSMUST00000018522.13	3180	11	70889	10767	70889	-10767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAATTCATGAAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	88060860	88074199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_88061001_88068095_88068224_88073306_88073434_88074064
ENSMUSG00000018379.18_87938199_87941753_1	chr11	+	2534	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	0	2828	0	517	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTCTAACATTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	87938198	87941753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
ENSMUSG00000018379.18_87938551_87942043_1	chr11	+	2472	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	352	2538	7	-273	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTAAGATGCACGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	87938550	87942043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
ENSMUSG00000018379.18_87939869_87942528_1	chr11	+	2464	2	ISM	ENSMUSG00000018379.18	ENSMUST00000107920.10	1209	5	1240	-1292	1240	212	intron_retention	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAAAGTAATCTTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	87939868	87942528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87940042_87940237
ENSMUSG00000018379.18_87939981_87942721_1	chr11	+	2545	2	ISM	ENSMUSG00000018379.18	ENSMUST00000107920.10	1209	5	1352	-1485	1352	405	intron_retention	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATAGTGTGCTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	87939980	87942721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87940042_87940237
ENSMUSG00000018387.13_53354802_53356032_1	chr11	+	361	3	ISM	ENSMUSG00000018387.13	ENST00000319854.7	2394	7	721	1826	721	-1826	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTCGGTGTCTACTCCG	NA	NA	NA	NA	NA	NA	NA	NA	53354801	53356032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53355021_53355101_53355158_53355946
ENSMUSG00000018387.13_53354897_53356346_1	chr11	+	393	4	ISM	ENSMUSG00000018387.13	ENST00000319854.7	2394	7	816	1512	816	-1512	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGACTTAAGCAAAAAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	53354896	53356346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53355021_53355101_53355158_53355946_53356136_53356322
ENSMUSG00000018387.13_53354968_53356379_1	chr11	+	355	4	ISM	ENSMUSG00000018387.13	ENST00000319854.7	2394	7	887	1479	887	-1479	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGCAGAGAGACCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	53354967	53356379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53355021_53355101_53355158_53355946_53356136_53356322
ENSMUSG00000018387.13_53355001_53356450_1	chr11	+	393	4	ISM	ENSMUSG00000018387.13	ENST00000319854.7	2394	7	920	1408	920	-1408	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGGATCTCTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	53355000	53356450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53355021_53355101_53355158_53355946_53356136_53356322
ENSMUSG00000018387.13_53356545_53357004_1	chr11	+	381	2	ISM	ENSMUSG00000018387.13	ENST00000319854.7	2394	7	2464	854	2464	-854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGAAAACTCTACCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	53356544	53357004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53356872_53356950
ENSMUSG00000018387.13_53356659_53357263_1	chr11	+	405	3	ISM	ENSMUSG00000018387.13	ENST00000319854.7	2394	7	2578	595	2578	-595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGGGGACCGCCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	53356658	53357263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53356872_53356950_53357084_53357204
ENSMUSG00000018387.13_53356731_53357296_1	chr11	+	366	3	ISM	ENSMUSG00000018387.13	ENST00000319854.7	2394	7	2650	562	2650	-562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGGAGCTCTAGAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	53356730	53357296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53356872_53356950_53357084_53357204
ENSMUSG00000018387.13_53356768_53357375_1	chr11	+	408	3	ISM	ENSMUSG00000018387.13	ENST00000319854.7	2394	7	2687	483	2687	-483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGCGTGTGCTTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	53356767	53357375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53356872_53356950_53357084_53357204
ENSMUSG00000018387.13_53356974_53357620_1	chr11	+	399	3	ISM	ENSMUSG00000018387.13	ENST00000319854.7	2394	7	2893	238	2893	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCGACAGCAAGAAGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	53356973	53357620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53357084_53357204_53357478_53357604
ENSMUSG00000018387.13_53357051_53357656_1	chr11	+	358	3	ISM	ENSMUSG00000018387.13	ENST00000319854.7	2394	7	2970	202	2970	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGGCTCGGCGGGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	53357050	53357656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53357084_53357204_53357478_53357604
ENSMUSG00000018387.13_53357303_53357859_1	chr11	+	430	2	ISM	ENSMUSG00000018387.13	ENST00000319854.7	2394	7	3222	-1	3222	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCTGGGCCCCAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	53357302	53357859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53357478_53357604
ENSMUSG00000018395.20_53474076_53484286_1	chr11	+	673	5	ISM	ENSMUSG00000018395.20	ENSMUST00000057330.15	2290	17	15870	7646	15723	-7600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGGAAGAAGAAGAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	53474075	53484286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484200
ENSMUSG00000018395.20_53474687_53484814_1	chr11	+	650	5	ISM	ENSMUSG00000018395.20	ENSMUST00000057330.15	2290	17	16481	7118	16334	-7072	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGGCCAAGGCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	53474686	53484814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53474840_53475097_53475273_53477661_53477758_53484200_53484358_53484745
ENSMUSG00000018395.20_53474793_53484926_1	chr11	+	656	5	ISM	ENSMUSG00000018395.20	ENSMUST00000057330.15	2290	17	16587	7006	16440	-6960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCATGTTGAGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	53474792	53484926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53474840_53475097_53475273_53477661_53477758_53484200_53484358_53484745
ENSMUSG00000018395.20_53475228_53485697_1	chr11	+	635	6	ISM	ENSMUSG00000018395.20	ENSMUST00000057330.15	2290	17	17022	6235	16875	-6189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGAACATCCGGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	53475227	53485697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53475273_53477661_53477758_53484200_53484358_53484745_53484927_53485103_53485215_53485652
ENSMUSG00000018395.20_53485662_53492434_1	chr11	+	962	5	ISM	ENSMUSG00000018395.20	ENSMUST00000120613.9	3161	18	27456	360	27309	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGACAGCTCTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	53485661	53492434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ENSMUSG00000018398.19_53425298_53432166_1	chr11	+	1227	8	ISM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	14725	2756	14544	-508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTTACAGCTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	53425297	53432166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
ENSMUSG00000018398.19_53425924_53432492_1	chr11	+	1247	7	ISM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	15351	2430	15170	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTATTTTAATTTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	53425923	53432492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
ENSMUSG00000018398.19_53426878_53432674_1	chr11	+	1287	6	ISM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	16305	2248	16124	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGAAAGCATCCCTATAA	NA	NA	NA	NA	NA	NA	NA	NA	53426877	53432674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
ENSMUSG00000018398.19_53428036_53432858_1	chr11	+	1260	4	ISM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	17463	2064	17282	133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGACCAAGTGCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	53428035	53432858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53428150_53428313_53428447_53428551_53428743_53432036
ENSMUSG00000018398.19_53428402_53433061_1	chr11	+	1261	3	ISM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	17829	1861	17648	336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTGAGACTGTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	53428401	53433061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53428447_53428551_53428743_53432036
ENSMUSG00000018398.19_53428656_53433184_1	chr11	+	1235	2	ISM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	18083	1738	17902	459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCCAGCCTCAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	53428655	53433184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53428743_53432036
ENSMUSG00000018398.19_53428697_53433244_1	chr11	+	1254	2	ISM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	18124	1678	17943	519	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCCATTTTGCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	53428696	53433244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53428743_53432036
ENSMUSG00000018401.18_87491909_87493330_1	chr11	+	187	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	8186	12668	8186	-12668	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCAAAGCCTGCGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	87491908	87493330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87491999_87493233
ENSMUSG00000018401.18_87491967_87493373_1	chr11	+	172	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	8244	12625	8244	-12625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTCCCTCAGCACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	87491966	87493373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87491999_87493233
ENSMUSG00000018401.18_87493338_87493694_1	chr11	+	182	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	9615	12304	9615	-12304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTAACCGGGCCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	87493337	87493694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87493431_87493605
ENSMUSG00000018401.18_87493400_87493734_1	chr11	+	160	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	9677	12264	9677	-12264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTGACTAGTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	87493399	87493734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87493431_87493605
ENSMUSG00000018401.18_87493686_87494830_1	chr11	+	179	3	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	9963	11168	9963	-11168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACCAAATGGCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87493685	87494830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87493735_87494213_87494326_87494812
ENSMUSG00000018401.18_87494244_87494904_1	chr11	+	174	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	10521	11094	10521	-11094	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCGGCCTGTGCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	87494243	87494904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87494326_87494812
ENSMUSG00000018401.18_87494300_87494956_1	chr11	+	170	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	10577	11042	10577	-11042	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTAGCCCTGGCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	87494299	87494956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87494326_87494812
ENSMUSG00000018401.18_87494891_87495322_1	chr11	+	197	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	11168	10676	11168	-10676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAGGACCAAAATGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	87494890	87495322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87495009_87495243
ENSMUSG00000018401.18_87494953_87495362_1	chr11	+	175	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	11230	10636	11230	-10636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGATTCCGTGCATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87494952	87495362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87495009_87495243
ENSMUSG00000018401.18_87495334_87495911_1	chr11	+	186	2	ISM	ENSMUSG00000018401.18	ENSMUST00000092802.12	5525	18	12289	11217	11611	-10087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGGATCTTTACCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	87495333	87495911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87495430_87495821
ENSMUSG00000018401.18_87495390_87495963_1	chr11	+	182	2	ISM	ENSMUSG00000018401.18	ENSMUST00000092802.12	5525	18	12345	11165	11667	-10035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTGGACAGGTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	87495389	87495963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87495430_87495821
ENSMUSG00000018401.18_87495843_87501805_1	chr11	+	181	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	12120	4193	12120	-4193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCAGCCCCCTCACTCGT	NA	NA	NA	NA	NA	NA	NA	NA	87495842	87501805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87495977_87501758
ENSMUSG00000018401.18_87495891_87501861_1	chr11	+	189	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	12168	4137	12168	-4137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCAGAGGCAGCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	87495890	87501861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87495977_87501758
ENSMUSG00000018401.18_87495953_87501903_1	chr11	+	169	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	12230	4095	12230	-4095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGCAGAGACAGTCATAGA	NA	NA	NA	NA	NA	NA	NA	NA	87495952	87501903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87495977_87501758
ENSMUSG00000018401.18_87502991_87504274_1	chr11	+	179	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	19268	1724	19268	-1724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTGAAGACTTTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	87502990	87504274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87503143_87504247
ENSMUSG00000018401.18_87503048_87504318_1	chr11	+	166	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	19325	1680	19325	-1680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCAAGCTGGGAACCCG	NA	NA	NA	NA	NA	NA	NA	NA	87503047	87504318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87503143_87504247
ENSMUSG00000018401.18_87503098_87504618_1	chr11	+	177	3	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	19375	1380	19375	-1380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGGCATCCCACTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	87503097	87504618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87503143_87504247_87504359_87504597
ENSMUSG00000018401.18_87504306_87504947_1	chr11	+	188	3	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	20583	1051	20583	-1051	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTCCTGATCAGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	87504305	87504947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87504359_87504597_87504687_87504901
ENSMUSG00000018401.18_87504633_87505022_1	chr11	+	175	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	20910	976	20910	-976	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGGGAACTCATGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	87504632	87505022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87504687_87504901
ENSMUSG00000018411.18_104122399_104201122_1	chr11	+	512	7	ISM	ENSMUSG00000018411.18	ENST00000535772.6	1314	10	99	17945	-11	-17891	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTACAGCAGCCCCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	104122398	104201122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_104122434_104173193_104173307_104177948_104178036_104185684_104185751_104193186_104193237_104197451_104197585_104201094
ENSMUSG00000018411.18_104173207_104201192_1	chr11	+	534	6	ISM	ENSMUSG00000018411.18	ENST00000535772.6	1314	10	50907	17875	0	-17821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACCCGGGAGCCCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	104173206	104201192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_104173307_104177948_104178036_104185684_104185751_104193186_104193237_104197451_104197585_104201094
ENSMUSG00000018411.18_104177947_104219013_1	chr11	+	1102	9	NNC	ENSMUSG00000018411.18	novel	1108	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTCCCAGGGCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	104177946	104219013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_104178036_104185690_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018411.18_104177947_104219013_2	chr11	+	1107	9	NNC	ENSMUSG00000018411.18	novel	1108	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTCCCAGGGCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	104177946	104219013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_104178036_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218798
ENSMUSG00000018411.18_104177947_104219013_3	chr11	+	1103	9	NNC	ENSMUSG00000018411.18	novel	1108	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTCCCAGGGCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	104177946	104219013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_104178036_104185684_104185751_104193186_104193237_104197451_104197580_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018411.18_104177947_104219013_4	chr11	+	1108	9	FSM	ENSMUSG00000018411.18	ENST00000420682.6	1108	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTCCCAGGGCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	104177946	104219013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_104178036_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018411.18_104197570_104218837_1	chr11	+	516	5	ISM	ENSMUSG00000018411.18	ENST00000535772.6	1314	10	75270	230	19623	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGACAGACCATGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	104197569	104218837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018411.18_104201173_104218911_1	chr11	+	497	4	ISM	ENSMUSG00000018411.18	ENST00000535772.6	1314	10	78873	156	23226	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATGTGTCTTCCACGGG	NA	NA	NA	NA	NA	NA	NA	NA	104201172	104218911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_104201361_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018411.18_104201222_104219013_1	chr11	+	550	4	ISM	ENSMUSG00000018411.18	ENST00000535772.6	1314	10	78922	54	23275	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTCCCAGGGCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	104201221	104219013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_104201361_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018411.18_104201282_104219036_1	chr11	+	513	4	ISM	ENSMUSG00000018411.18	ENST00000535772.6	1314	10	78982	31	23335	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATGGAGAGAAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	104201281	104219036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_104201361_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018415.15_60308088_60334544_1	chr11	+	2724	6	FSM	ENSMUSG00000018415.15	ENSMUST00000070681.7	4283	6	0	1559	0	-1559	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCACCTCGAGGCCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	60308087	60334544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ENSMUSG00000018415.15_60308504_60334925_1	chr11	+	2689	6	FSM	ENSMUSG00000018415.15	ENSMUST00000070681.7	4283	6	416	1178	416	-1178	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGGAGCATAGGGGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	60308503	60334925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ENSMUSG00000018415.15_60329334_60335386_1	chr11	+	2648	2	ISM	ENSMUSG00000018415.15	ENSMUST00000070681.7	4283	6	21246	717	21246	-717	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGGTCCTGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	60329333	60335386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60329400_60332804
ENSMUSG00000018425.19_86659672_86662036_1	chr11	-	1597	2	ISM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	36536	0	29875	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACAGTATGTGGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	86662036	86659671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86661088_86661855
ENSMUSG00000018425.19_86659952_86667466_1	chr11	-	1665	6	ISM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	31106	280	24445	-280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATTTTTCAAAGCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	86667466	86659951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440
ENSMUSG00000018425.19_86660008_86667512_1	chr11	-	1655	6	ISM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	31060	336	24399	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCACCTGCTTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	86667512	86660007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440
ENSMUSG00000018425.19_86660440_86680136_1	chr11	-	1649	9	ISM	ENSMUSG00000018425.19	ENST00000425628.7	2250	17	18299	-427	11775	427	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTATTTAAAGACTGATT	NA	NA	NA	NA	NA	NA	NA	NA	86680136	86660439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992
ENSMUSG00000018425.19_86660726_86688507_1	chr11	-	1648	12	ISM	ENSMUSG00000018425.19	ENST00000425628.7	2250	17	9928	-141	3404	141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGATGATACAATATTTC	NA	NA	NA	NA	NA	NA	NA	NA	86688507	86660725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448
ENSMUSG00000018425.19_86660991_86690362_1	chr11	-	1640	14	ISM	ENSMUSG00000018425.19	ENST00000425628.7	2250	17	8073	124	1549	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATCCAGGACCACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	86690362	86660990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245
ENSMUSG00000018425.19_86662037_86695136_1	chr11	-	1647	15	ISM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	3436	2365	-3225	-1170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTTACCACCAAAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	86695136	86662036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082
ENSMUSG00000018425.19_86664630_86688580_1	chr11	-	1060	9	ISM	ENSMUSG00000018425.19	ENST00000425628.7	2250	17	9855	3763	3331	1851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGTTACAGTGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	86688580	86664629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448
ENSMUSG00000018425.19_86666486_86697453_1	chr11	-	1694	13	ISM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	1119	6814	982	-5	internal_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACTGCTGTGGCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	86697453	86666485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285
ENSMUSG00000018425.19_86667504_86698387_1	chr11	-	1646	13	ISM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	185	7832	48	-1023	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCTGGAGGATTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	86698387	86667503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
ENSMUSG00000018425.19_86675742_86698572_1	chr11	-	1742	12	ISM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	0	16070	0	-9261	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGCTATCTGTGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86698572	86675741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
ENSMUSG00000018425.19_86680034_86698317_1	chr11	-	1013	9	ISM	ENSMUSG00000018425.19	ENST00000425628.7	2250	17	118	19167	118	-13553	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGACATTAAAGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	86698317	86680033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86697370_86697454_86698263
ENSMUSG00000018425.19_86680110_86698356_1	chr11	-	976	9	ISM	ENSMUSG00000018425.19	ENST00000425628.7	2250	17	79	19243	79	-13629	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAAAGAGTTTTGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	86698356	86680109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86697370_86697454_86698263
ENSMUSG00000018427.9_86831234_86868229_1	chr11	-	824	5	NNC	ENSMUSG00000018427.9	novel	828	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTATCTGTTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	86868229	86831233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634_86862940_86868144
ENSMUSG00000018427.9_86831234_86868229_2	chr11	-	824	5	FSM	ENSMUSG00000018427.9	ENST00000585166.1	828	5	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTATCTGTTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	86868229	86831233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634_86862949_86868153
ENSMUSG00000018427.9_86831234_86868229_3	chr11	-	833	5	NNC	ENSMUSG00000018427.9	novel	828	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTATCTGTTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	86868229	86831233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634_86862949_86868144
ENSMUSG00000018427.9_86831234_86868229_4	chr11	-	811	5	NNC	ENSMUSG00000018427.9	novel	828	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTATCTGTTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	86868229	86831233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634_86862949_86868166
ENSMUSG00000018433.15_107058436_107062479_1	chr11	-	272	4	ISM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	17728	947	17728	-947	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGCTTCCGGGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	107062479	107058435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440
ENSMUSG00000018433.15_107059171_107064070_1	chr11	-	252	4	ISM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	16137	1682	16137	-1682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTAATGATACCAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	107064070	107059170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_107059216_107061917_107062011_107062440_107062520_107064035
ENSMUSG00000018433.15_107064076_107064469_1	chr11	-	252	2	ISM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	15738	6587	15738	-6587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCATGTCCTGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	107064469	107064075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_107064288_107064429
ENSMUSG00000018433.15_107064119_107064528_1	chr11	-	268	2	ISM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	15679	6630	15679	-6630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGCCTGCAGACACAGC	NA	NA	NA	NA	NA	NA	NA	NA	107064528	107064118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_107064288_107064429
ENSMUSG00000018433.15_107069896_107071914_1	chr11	-	276	3	ISM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	8293	12407	8293	-12407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCATGCTACATGGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	107071914	107069895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_107069919_107070867_107070945_107071738
ENSMUSG00000018433.15_107070925_107072619_1	chr11	-	264	3	ISM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	7588	13436	7588	-13436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGTTTCAAACATTACA	NA	NA	NA	NA	NA	NA	NA	NA	107072619	107070924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_107070945_107071738_107071928_107072564
ENSMUSG00000018433.15_107071862_107074446_1	chr11	-	259	3	ISM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	5761	14373	5761	-14373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAGTTAGAGCATTGATG	NA	NA	NA	NA	NA	NA	NA	NA	107074446	107071861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_107071928_107072564_107072710_107074398
ENSMUSG00000018433.15_107072664_107077491_1	chr11	-	284	4	ISM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	2716	15175	2716	-15175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCAAATACACACTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	107077491	107072663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_107072710_107074398_107074457_107075565_107075715_107077460
ENSMUSG00000018442.14_70904410_70910038_1	chr11	-	358	5	ISM	ENSMUSG00000018442.14	ENSMUST00000143850.8	3666	7	91	6142	30	-3651	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTACGTGTGGAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	70910038	70904409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
ENSMUSG00000018446.9_70868674_70870910_1	chr11	-	691	4	ISM	ENSMUSG00000018446.9	ENSMUST00000078528.7	1175	6	2942	12	2942	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAAGTTGAGGTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	70870910	70868673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70869071_70869253_70869377_70869514_70869611_70870835
ENSMUSG00000018446.9_70868943_70873570_1	chr11	-	612	6	FSM	ENSMUSG00000018446.9	ENSMUST00000078528.7	1175	6	282	281	282	-281	multi-exon	FALSE	canonical	NA	NA	NA	NA	1664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTTGTCAAGAACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	70873570	70868942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70869071_70869253_70869377_70869514_70869611_70870835_70870930_70872995_70873147_70873550
ENSMUSG00000018446.9_70868994_70873623_1	chr11	-	614	6	FSM	ENSMUSG00000018446.9	ENSMUST00000078528.7	1175	6	229	332	229	-332	multi-exon	FALSE	canonical	NA	NA	NA	NA	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACAGCCCTGGAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	70873623	70868993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70869071_70869253_70869377_70869514_70869611_70870835_70870930_70872995_70873147_70873550
ENSMUSG00000018446.9_70869052_70873667_1	chr11	-	600	6	FSM	ENSMUSG00000018446.9	ENSMUST00000078528.7	1175	6	185	390	185	-390	multi-exon	FALSE	canonical	NA	NA	NA	NA	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTCCTTGCGGACCGA	NA	NA	NA	NA	NA	NA	NA	NA	70873667	70869051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70869071_70869253_70869377_70869514_70869611_70870835_70870930_70872995_70873147_70873550
ENSMUSG00000018446.9_70869515_70873833_1	chr11	-	624	4	ISM	ENSMUSG00000018446.9	ENSMUST00000078528.7	1175	6	19	853	19	-853	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTAGGGTGGAGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	70873833	70869514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70869611_70870835_70870930_70872995_70873147_70873550
ENSMUSG00000018449.13_70861053_70868659_1	chr11	+	1086	7	FSM	ENSMUSG00000018449.13	ENSMUST00000018593.10	1100	7	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAACTTTCCTGGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	70861052	70868659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865725_70865867_70868483
ENSMUSG00000018476.8_69292946_69294675_1	chr11	-	328	3	ISM	ENSMUSG00000018476.8	ENSMUST00000094077.5	6654	23	9826	3612	9826	-3607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACGCACAGTACCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	69294675	69292945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69293108_69294403_69294510_69294615
ENSMUSG00000018479.13_85061922_85069175_1	chr11	+	599	5	FSM	ENSMUSG00000018479.13	ENST00000269127.5	679	5	25	55	0	-55	multi-exon	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATATCAGCGGCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	85061921	85069175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_85062072_85063681_85063762_85064013_85064190_85064842_85064943_85069082
ENSMUSG00000018479.13_85061922_85069232_1	chr11	+	656	5	FSM	ENSMUSG00000018479.13	ENST00000269127.5	679	5	25	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCATGCTGGAGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	85061921	85069232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_85062072_85063681_85063762_85064013_85064190_85064842_85064943_85069082
ENSMUSG00000018481.10_85085425_85088971_1	chr11	-	413	3	ISM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	36985	7337	36985	-7337	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACCTGCGGTCGATAGCC	NA	NA	NA	NA	NA	NA	NA	NA	85088971	85085424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_85085567_85086891_85087083_85088891
ENSMUSG00000018481.10_85100825_85106087_1	chr11	-	386	3	ISM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	19869	22737	19869	-22737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGCTCTCTACGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	85106087	85100824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_85100935_85105061_85105186_85105935
ENSMUSG00000018500.3_62140002_62156516_1	chr11	+	890	2	FSM	ENSMUSG00000018500.3	ENSMUST00000018644.3	1845	2	192	763	192	-763	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCGCAGTCTACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	62140001	62156516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_62140263_62155887
ENSMUSG00000018501.18_62310420_62329307_1	chr11	-	331	2	FSM	ENSMUSG00000018501.18	ENST00000478176.1	332	2	1	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCAAGCCCTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	62329307	62310419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_62310607_62329163
ENSMUSG00000018501.18_62310556_62329307_1	chr11	-	195	2	FSM	ENSMUSG00000018501.18	ENST00000478176.1	332	2	1	136	0	-132	multi-exon	FALSE	canonical	NA	NA	NA	NA	1299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCATGTGGAGATGACCA	NA	NA	NA	NA	NA	NA	NA	NA	62329307	62310555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_62310607_62329163
ENSMUSG00000018507.17_62469281_62491126_1	chr11	+	2327	14	ISM	ENSMUSG00000018507.17	ENSMUST00000102643.2	2650	15	2330	-1	2330	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCAAGTCTTCTAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	62469280	62491126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62469422_62471997_62472132_62473668_62473960_62475201_62475501_62480476_62480651_62480988_62481145_62481732_62481832_62483051_62483123_62483576_62483743_62484978_62485046_62485748_62486078_62487735_62487864_62489059_62489140_62490934
ENSMUSG00000018507.17_62469315_62491223_1	chr11	+	2390	14	ISM	ENSMUSG00000018507.17	ENSMUST00000102643.2	2650	15	2364	-98	2364	98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTGAGTTCGAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	62469314	62491223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62469422_62471997_62472132_62473668_62473960_62475201_62475501_62480476_62480651_62480988_62481145_62481732_62481832_62483051_62483123_62483576_62483743_62484978_62485046_62485748_62486078_62487735_62487864_62489059_62489140_62490934
ENSMUSG00000018537.17_97580646_97590407_1	chr11	-	1130	9	NIC	ENSMUSG00000018537.17	novel	1438	11	NA	NA	60	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATATACATACTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	97590407	97580645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97590361
ENSMUSG00000018537.17_97580646_97590407_2	chr11	-	1125	9	NNC	ENSMUSG00000018537.17	novel	1438	11	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATATACATACTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	97590407	97580645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583381_97583551_97583649_97590361
ENSMUSG00000018537.17_97580646_97590514_1	chr11	-	1237	9	NIC	ENSMUSG00000018537.17	novel	1755	13	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATATACATACTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	97590514	97580645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97590361
ENSMUSG00000018537.17_97580646_97590514_2	chr11	-	1232	9	NNC	ENSMUSG00000018537.17	novel	1755	13	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATATACATACTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	97590514	97580645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583381_97583551_97583649_97590361
ENSMUSG00000018537.17_97580646_97590514_3	chr11	-	1234	9	NNC	ENSMUSG00000018537.17	novel	1163	9	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATATACATACTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	97590514	97580645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_97581185_97581786_97581868_97582516_97582606_97582683_97582739_97582848_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97590361
ENSMUSG00000018541.11_97636441_97641775_1	chr11	-	2095	3	ISM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	15607	0	15591	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTAGAGCGATCTAC	NA	NA	NA	NA	NA	NA	NA	NA	97641775	97636440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97638296_97638786_97638949_97641697
ENSMUSG00000018541.11_97636692_97643536_1	chr11	-	1997	4	ISM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	13846	251	13830	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTCCTGGAACTCACT	NA	NA	NA	NA	NA	NA	NA	NA	97643536	97636691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395
ENSMUSG00000018541.11_97636835_97644105_1	chr11	-	1971	5	ISM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	13277	394	13261	-394	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCATATATTAAGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	97644105	97636834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041
ENSMUSG00000018541.11_97637100_97648476_1	chr11	-	1982	8	ISM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	8906	659	8890	-659	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCATCCCCATCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	97648476	97637099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398
ENSMUSG00000018541.11_97637161_97648546_1	chr11	-	1991	8	ISM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	8836	720	8820	-720	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCCAGGGCAGCCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	97648546	97637160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398
ENSMUSG00000018541.11_97637321_97654095_1	chr11	-	1981	9	ISM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	3287	880	3271	-880	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTTGTTTGTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	97654095	97637320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034
ENSMUSG00000018541.11_97637525_97657366_1	chr11	-	2005	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	16	1084	0	-1084	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCCTCTACAAATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	97657366	97637524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
ENSMUSG00000018548.16_87018131_87037839_1	chr11	+	741	7	ISM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	228	73670	228	-73670	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGACTAGATACACAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	87018130	87037839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759
ENSMUSG00000018548.16_87037792_87073340_1	chr11	+	769	8	ISM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	19889	38169	19889	-38169	internal_fragment	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAATAAACAATCTTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	87037791	87073340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246
ENSMUSG00000018548.16_87075748_87092311_1	chr11	+	767	5	ISM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	57845	19198	57845	-19198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAGACATGCAGACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	87075747	87092311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143
ENSMUSG00000018548.16_87087670_87097760_1	chr11	+	775	4	ISM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	69767	13749	69767	-13749	internal_fragment	TRUE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAATGGTCACCTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	87087669	87097760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87087842_87092143_87092453_87096758_87096882_87097589
ENSMUSG00000018554.14_69826844_69832250_1	chr11	+	1288	9	FSM	ENSMUSG00000018554.14	ENST00000007699.10	1665	9	206	171	-26	-152	multi-exon	FALSE	canonical	NA	NA	NA	NA	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCCCTAGTCAGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	69826843	69832250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69827075_69827722_69827787_69829167_69829202_69830063_69830154_69830699_69830985_69831153_69831258_69831415_69831594_69831853_69831957_69832051
ENSMUSG00000018554.14_69826940_69831490_2	chr11	+	763	7	ISM	ENSMUSG00000018554.14	ENST00000557561.2	985	8	70	430	70	-430	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGATGGCTCCCGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	69826939	69831490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69827075_69827722_69827787_69829167_69829202_69830063_69830154_69830699_69830985_69831153_69831249_69831430
ENSMUSG00000018554.14_69826940_69831490_3	chr11	+	756	7	NNC	ENSMUSG00000018554.14	novel	985	8	NA	NA	70	-430	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGATGGCTCCCGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	69826939	69831490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_69827075_69827722_69827787_69829167_69829202_69830063_69830154_69830706_69830985_69831153_69831249_69831430
ENSMUSG00000018554.14_69826940_69831593_1	chr11	+	866	7	ISM	ENSMUSG00000018554.14	ENST00000557561.2	985	8	70	327	70	-327	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGTCTTGGTACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	69826939	69831593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69827075_69827722_69827787_69829167_69829202_69830063_69830154_69830699_69830985_69831153_69831249_69831430
ENSMUSG00000018554.14_69827039_69831885_1	chr11	+	781	8	FSM	ENSMUSG00000018554.14	ENST00000557561.2	985	8	169	35	-114	-35	multi-exon	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAGTGGGGACCCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	69827038	69831885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69827075_69827722_69827787_69829167_69829202_69830063_69830154_69830699_69830985_69831153_69831249_69831430_69831594_69831871
ENSMUSG00000018554.14_69827722_69831920_1	chr11	+	781	7	ISM	ENSMUSG00000018554.14	ENST00000557561.2	985	8	852	0	569	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCCAACTCAGAGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	69827721	69831920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69827787_69829167_69829202_69830063_69830154_69830699_69830985_69831153_69831249_69831430_69831594_69831871
ENSMUSG00000018559.17_69872341_69875319_1	chr11	+	211	3	ISM	ENSMUSG00000018559.17	ENST00000506083.1	671	7	31	5075	31	-5075	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTGAGACCTGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	69872340	69875319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69872412_69875079_69875147_69875246
ENSMUSG00000018559.17_69872381_69875589_1	chr11	+	242	4	ISM	ENSMUSG00000018559.17	ENST00000506083.1	671	7	71	4805	71	-4805	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTACATAAGAGGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	69872380	69875589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69872412_69875079_69875147_69875246_69875361_69875559
ENSMUSG00000018559.17_69875080_69875633_1	chr11	+	255	3	ISM	ENSMUSG00000018559.17	ENST00000506083.1	671	7	2770	4761	2770	-4761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTGCATGAGCTAACGG	NA	NA	NA	NA	NA	NA	NA	NA	69875079	69875633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69875147_69875246_69875361_69875559
ENSMUSG00000018559.17_69875240_69879461_1	chr11	+	216	3	ISM	ENSMUSG00000018559.17	ENST00000506083.1	671	7	2930	933	2930	-933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTTCACAGCAAGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	69875239	69879461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69875361_69875559_69875632_69879438
ENSMUSG00000018559.17_69875295_69879508_1	chr11	+	208	3	ISM	ENSMUSG00000018559.17	ENST00000506083.1	671	7	2985	886	2985	-886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGGACAACAGCAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	69875294	69879508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69875361_69875559_69875632_69879438
ENSMUSG00000018559.17_69879651_69880396_1	chr11	+	204	2	ISM	ENSMUSG00000018559.17	ENST00000506083.1	671	7	7341	-2	7341	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGTGTGTGGCCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	69879650	69880396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69879766_69880307
ENSMUSG00000018565.18_69859050_69872078_1	chr11	-	1451	9	NNC	ENSMUSG00000018565.18	novel	1454	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGTAATGCTTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	69872078	69859049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_69859359_69859916_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039_69871389_69872032
ENSMUSG00000018565.18_69859050_69872078_2	chr11	-	1447	9	NNC	ENSMUSG00000018565.18	novel	1454	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGTAATGCTTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	69872078	69859049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870730_69870824_69870886_69871039_69871389_69872032
ENSMUSG00000018567.15_69881969_69885351_1	chr11	+	925	4	FSM	ENSMUSG00000018567.15	ENSMUST00000018711.15	1351	4	0	426	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTACCTGAGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	69881968	69885351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284
ENSMUSG00000018567.15_69882465_69885777_1	chr11	+	855	4	FSM	ENSMUSG00000018567.15	ENSMUST00000018711.15	1351	4	496	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCCTGTGTCATTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	69882464	69885777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284
ENSMUSG00000018567.15_69882510_69885777_1	chr11	+	810	4	FSM	ENSMUSG00000018567.15	ENSMUST00000018711.15	1351	4	541	0	45	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCCTGTGTCATTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	69882509	69885777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284
ENSMUSG00000018572.11_69886702_69890229_1	chr11	+	1100	5	FSM	ENSMUSG00000018572.11	ENSMUST00000101526.9	1706	5	0	606	0	-362	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGAGGCCCGGCGGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	69886701	69890229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889327_69889959_69890063
ENSMUSG00000018572.11_69886820_69890315_1	chr11	+	1068	5	FSM	ENSMUSG00000018572.11	ENSMUST00000101526.9	1706	5	118	520	118	-276	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCCTCAGGGTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	69886819	69890315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889327_69889959_69890063
ENSMUSG00000018572.11_69888642_69890591_1	chr11	+	1182	3	ISM	ENSMUSG00000018572.11	ENSMUST00000101526.9	1706	5	1940	244	707	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCACTCCCCTCATGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	69888641	69890591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69888665_69889327_69889959_69890063
ENSMUSG00000018574.15_69901070_69903294_1	chr11	-	964	11	ISM	ENSMUSG00000018574.15	ENSMUST00000018718.8	2020	19	2919	0	2919	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGGGGGTGATGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	69903294	69901069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69901263_69901350_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273
ENSMUSG00000018574.15_69901200_69903400_1	chr11	-	940	11	ISM	ENSMUSG00000018574.15	ENSMUST00000018718.8	2020	19	2813	130	2813	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCGGAACTTCAGAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	69903400	69901199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69901263_69901350_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273
ENSMUSG00000018574.15_69901244_69903408_1	chr11	-	904	11	ISM	ENSMUSG00000018574.15	ENSMUST00000018718.8	2020	19	2805	174	2805	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGGCCAGTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	69903408	69901243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69901263_69901350_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273
ENSMUSG00000018574.15_69901675_69903909_1	chr11	-	926	9	ISM	ENSMUSG00000018574.15	ENSMUST00000018718.8	2020	19	2304	605	2304	-605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGAGCTCTGCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	69903909	69901674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783
ENSMUSG00000018574.15_69901831_69904127_1	chr11	-	984	9	ISM	ENSMUSG00000018574.15	ENSMUST00000018718.8	2020	19	2086	761	2086	-761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGAGCCTTAAAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	69904127	69901830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997
ENSMUSG00000018574.15_69902048_69904287_1	chr11	-	884	9	ISM	ENSMUSG00000018574.15	ENSMUST00000018718.8	2020	19	1926	978	1926	-978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTGGAAACGTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	69904287	69902047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259
ENSMUSG00000018574.15_69902170_69904404_1	chr11	-	958	8	ISM	ENSMUSG00000018574.15	ENSMUST00000018718.8	2020	19	1809	1100	1809	-1100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAGGAAGGAGGATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	69904404	69902169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259
ENSMUSG00000018574.15_69902361_69905205_1	chr11	-	991	8	ISM	ENSMUSG00000018574.15	ENSMUST00000018718.8	2020	19	1008	1291	1008	-1291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAGTATTCCTCGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	69905205	69902360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070
ENSMUSG00000018574.15_69902509_69905205_1	chr11	-	928	7	ISM	ENSMUSG00000018574.15	ENSMUST00000018718.8	2020	19	1008	1439	1008	-1439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGACCCAGGTGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	69905205	69902508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070
ENSMUSG00000018574.15_69902509_69905369_1	chr11	-	993	8	ISM	ENSMUSG00000018574.15	ENSMUST00000018718.8	2020	19	844	1439	844	-1439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGACCCAGGTGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	69905369	69902508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304
ENSMUSG00000018574.15_69903012_69905529_1	chr11	-	978	8	ISM	ENSMUSG00000018574.15	ENSMUST00000018718.8	2020	19	684	1942	684	-1942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGGCCTCCTGGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	69905529	69903011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456
ENSMUSG00000018574.15_69903310_69905962_1	chr11	-	923	9	ISM	ENSMUSG00000018574.15	ENSMUST00000102574.10	2168	20	272	2301	251	-2240	internal_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGCAGGCACCATGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	69905962	69903309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905618_69905685_69905942
ENSMUSG00000018574.15_69903417_69906203_1	chr11	-	990	10	ISM	ENSMUSG00000018574.15	ENSMUST00000102574.10	2168	20	31	2408	10	-2347	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGGAGTGAAGGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	69906203	69903416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905618_69905685_69905942_69906022_69906088
ENSMUSG00000018583.6_55360544_55391848_1	chr11	+	2854	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	33	3816	33	48	multi-exon	TRUE	canonical	NA	NA	NA	NA	3415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	55360543	55391848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ENSMUSG00000018583.6_55360544_55391905_1	chr11	+	2911	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	33	3759	33	105	multi-exon	FALSE	canonical	NA	NA	NA	NA	3412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGCGTACCACAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	55360543	55391905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ENSMUSG00000018583.6_55376449_55391445_1	chr11	+	2260	10	FSM	ENSMUSG00000018583.6	ENST00000520177.6	2488	10	0	228	0	-228	multi-exon	FALSE	canonical	NA	NA	NA	NA	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGCTTCTGTGAGGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	55376448	55391445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55390284
ENSMUSG00000018583.6_55376519_55391460_1	chr11	+	2204	10	NNC	ENSMUSG00000018583.6	novel	2488	10	NA	NA	69	-213	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTGACCTCAGTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	55376518	55391460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55390285
ENSMUSG00000018583.6_55376531_55388775_1	chr11	+	949	9	ISM	ENSMUSG00000018583.6	ENST00000677105.1	1442	11	81	1719	81	-1719	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATGGTGAGGCACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	55376530	55388775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_55376567_55378282_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738
ENSMUSG00000018583.6_55378297_55392107_1	chr11	+	2924	10	ISM	ENSMUSG00000098906.3_ENSMUSG00000018583.6	ENST00000678646.1	2749	11	1848	-307	1847	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGATTAGTCAGGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	55378296	55392107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ENSMUSG00000018583.6_55379843_55391675_1	chr11	+	2294	8	ISM	ENSMUSG00000018583.6	ENST00000520177.6	2488	10	3394	-2	3393	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAATTTTTATTAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	55379842	55391675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55390284
ENSMUSG00000018583.6_55386123_55392511_1	chr11	+	2835	6	ISM	ENSMUSG00000098906.3_ENSMUSG00000018583.6	ENST00000678646.1	2749	11	9674	-711	-5929	404	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTGCGAAGCAAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	55386122	55392511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ENSMUSG00000018583.6_55386969_55392639_1	chr11	+	2809	5	ISM	ENSMUSG00000098906.3_ENSMUSG00000018583.6	ENST00000678646.1	2749	11	10520	-839	-5083	532	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	920	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAGTCACAGGAAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	55386968	55392639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ENSMUSG00000018583.6_55387012_55392699_1	chr11	+	2826	5	ISM	ENSMUSG00000098906.3_ENSMUSG00000018583.6	ENST00000678646.1	2749	11	10563	-899	-5040	592	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTCAGTAACTCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	55387011	55392699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ENSMUSG00000018583.6_55387052_55392789_1	chr11	+	2876	5	ISM	ENSMUSG00000098906.3_ENSMUSG00000018583.6	ENST00000678646.1	2749	11	10603	-989	-5000	682	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTAACCTGATGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	55387051	55392789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ENSMUSG00000018583.6_55389423_55393049_1	chr11	+	2836	2	ISM	ENSMUSG00000098906.3_ENSMUSG00000018583.6	ENST00000678646.1	2749	11	12974	-1249	-2629	942	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	857	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTTGTGACTGGTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	55389422	55393049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_55389494_55390284
ENSMUSG00000018583.6_55389468_55393114_1	chr11	+	2856	2	ISM	ENSMUSG00000098906.3_ENSMUSG00000018583.6	ENST00000678646.1	2749	11	13019	-1314	-2584	1007	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	899	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGTGCTTTGGAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	55389467	55393114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_55389494_55390284
ENSMUSG00000018585.10_55337470_55341354_1	chr11	-	213	2	ISM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	10711	3	10711	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	863	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAAGTGTCTGGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	55341354	55337469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_55337611_55341282
ENSMUSG00000018585.10_55337574_55345747_1	chr11	-	247	3	ISM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	6318	107	6318	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTCAGTCCAGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	55345747	55337573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_55337611_55341282_55341452_55345706
ENSMUSG00000018589.9_163912742_164040176_1	chrX	-	1395	5	ISM	ENSMUSG00000018589.9	ENST00000355020.8	1726	9	69977	-459	69977	459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTAATTAGTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	164040176	163912741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_163913559_163966568_163966719_164035215_164035431_164037216_164037355_164040101
ENSMUSG00000018589.9_163912852_164064900_1	chrX	-	1375	6	ISM	ENSMUSG00000018589.9	ENST00000355020.8	1726	9	45253	-349	45253	349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATCTGACAATAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	164064900	163912851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_163913559_163966568_163966719_164035215_164035431_164037216_164037355_164040101_164040185_164064818
ENSMUSG00000018589.9_163912896_164065019_1	chrX	-	1450	6	ISM	ENSMUSG00000018589.9	ENST00000355020.8	1726	9	45134	-305	45134	305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	NA	NA	NA	NA	NA	NA	NA	NA	164065019	163912895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_163913559_163966568_163966719_164035215_164035431_164037216_164037355_164040101_164040185_164064818
ENSMUSG00000018589.9_163912993_164065042_1	chrX	-	1376	6	ISM	ENSMUSG00000018589.9	ENST00000355020.8	1726	9	45111	-208	45111	208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCTCAATGGATGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	164065042	163912992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_163913559_163966568_163966719_164035215_164035431_164037216_164037355_164040101_164040185_164064818
ENSMUSG00000018589.9_163913253_164108773_1	chrX	-	1376	9	ISM	ENSMUSG00000018589.9	ENST00000443437.6	3072	11	1776	1235	1380	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTAAGTGTTGTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	164108773	163913252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_163913559_163966568_163966719_164035215_164035431_164037216_164037355_164040101_164040185_164064818_164065043_164072594_164072623_164107496_164107631_164108675
ENSMUSG00000018589.9_163913306_164108840_1	chrX	-	1390	9	ISM	ENSMUSG00000018589.9	ENST00000443437.6	3072	11	1709	1288	1313	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATGAAGATGTCCACAAG	NA	NA	NA	NA	NA	NA	NA	NA	164108840	163913305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_163913559_163966568_163966719_164035215_164035431_164037216_164037355_164040101_164040185_164064818_164065043_164072594_164072623_164107496_164107631_164108675
ENSMUSG00000018589.9_163913321_164035272_1	chrX	-	445	3	ISM	ENSMUSG00000018589.9	ENST00000355020.8	1726	9	74881	120	74881	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACAAGATCATTCGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	164035272	163913320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_163913559_163966568_163966719_164035215
ENSMUSG00000018589.9_163913366_164035342_1	chrX	-	470	3	ISM	ENSMUSG00000018589.9	ENST00000355020.8	1726	9	74811	165	74811	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCACTGGCCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	164035342	163913365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_163913559_163966568_163966719_164035215
ENSMUSG00000018589.9_164035342_164064954_1	chrX	-	446	4	ISM	ENSMUSG00000018589.9	ENST00000355020.8	1726	9	45199	122141	45199	-122141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTTTGTCCTGGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	164064954	164035341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_164035431_164037216_164037355_164040101_164040185_164064818
ENSMUSG00000018589.9_164035392_164065015_1	chrX	-	457	4	ISM	ENSMUSG00000018589.9	ENST00000355020.8	1726	9	45138	122191	45138	-122191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGATGGGCTACTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	164065015	164035391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_164035431_164037216_164037355_164040101_164040185_164064818
ENSMUSG00000018589.9_164064894_164109871_1	chrX	-	425	4	ISM	ENSMUSG00000018589.9	ENST00000355020.8	1726	9	282	151693	282	-151693	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTCCATGATGTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	164109871	164064893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_164065043_164072435_164072504_164107496_164107631_164109797
ENSMUSG00000018589.9_164064949_164109923_1	chrX	-	422	4	ISM	ENSMUSG00000018589.9	ENST00000355020.8	1726	9	230	151748	230	-151748	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTTGGATTCGATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	164109923	164064948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_164065043_164072435_164072504_164107496_164107631_164109797
ENSMUSG00000018589.9_164065002_164109977_1	chrX	-	423	4	ISM	ENSMUSG00000018589.9	ENST00000355020.8	1726	9	176	151801	176	-151801	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGGCTGGCATACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	164109977	164065001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_164065043_164072435_164072504_164107496_164107631_164109797
ENSMUSG00000018593.14_55285885_55286739_1	chr11	-	668	2	ISM	ENSMUSG00000018593.14	ENSMUST00000108858.8	2115	10	23985	559	23985	362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTAGCCTAGGTCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	55286739	55285884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_55286440_55286626
ENSMUSG00000018593.14_55286039_55289479_1	chr11	-	656	3	ISM	ENSMUSG00000018593.14	ENSMUST00000213866.2	1366	11	21637	-208	21245	208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGACTCTGTGCTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	55289479	55286038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_55286440_55286626_55286776_55289373
ENSMUSG00000018593.14_55286346_55300823_1	chr11	-	987	9	ISM	ENSMUSG00000018593.14	ENSMUST00000213866.2	1366	11	10293	99	9901	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTAAAATGTTTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	55300823	55286345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753
ENSMUSG00000018593.14_55286627_55310726_1	chr11	-	1006	9	ISM	ENSMUSG00000018593.14	ENSMUST00000213866.2	1366	11	390	380	-2	-380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTTTGGGCTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	55310726	55286626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ENSMUSG00000018593.14_55286731_55310978_1	chr11	-	931	10	ISM	ENSMUSG00000018593.14	ENSMUST00000213866.2	1366	11	138	484	-72	-484	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCATGGAACATTGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	55310978	55286730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613_55310682_55310904
ENSMUSG00000018593.14_55289371_55311116_1	chr11	-	1027	9	ISM	ENSMUSG00000018593.14	ENSMUST00000213866.2	1366	11	0	3124	0	-3124	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCAGGGTCCTCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	55311116	55289370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613_55310682_55310904
ENSMUSG00000018593.14_55290078_55310726_1	chr11	-	648	7	ISM	ENSMUSG00000018593.14	ENSMUST00000213866.2	1366	11	390	3831	-2	-3831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACCTTGTACGAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	55310726	55290077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ENSMUSG00000018593.14_55292777_55310906_1	chr11	-	754	6	ISM	ENSMUSG00000018593.14	ENSMUST00000213866.2	1366	11	210	6530	0	-6530	intron_retention	FALSE	canonical	NA	NA	NA	NA	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTCCTCATGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	55310906	55292776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ENSMUSG00000018595.7_135658553_135673527_1	chrX	-	389	3	ISM	ENSMUSG00000018595.7	ENST00000674488.1	1041	7	3184	62	3184	-62	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCATCTCCAGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	135673527	135658552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_135658736_135663467_135663618_135673471
ENSMUSG00000018595.7_135658674_135675131_1	chrX	-	410	4	ISM	ENSMUSG00000018595.7	ENST00000674488.1	1041	7	1580	183	1580	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCAAGGGATGGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	135675131	135658673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_135658736_135663467_135663618_135673471_135673613_135675074
ENSMUSG00000018595.7_135663497_135675330_1	chrX	-	378	4	ISM	ENSMUSG00000018595.7	ENST00000674488.1	1041	7	1381	5006	1381	-5006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGTAGAAGGCAGAGACGT	NA	NA	NA	NA	NA	NA	NA	NA	135675330	135663496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_135663618_135673471_135673613_135675074_135675158_135675297
ENSMUSG00000018595.7_135663540_135675373_1	chrX	-	377	4	NNC	ENSMUSG00000018595.7	novel	1041	7	NA	NA	1338	-5049	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	329	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCAATTTTGTCTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	135675373	135663539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_135663618_135673471_135673613_135675074_135675158_135675298
ENSMUSG00000018595.7_135663550_135675379_1	chrX	-	374	4	ISM	ENSMUSG00000018595.7	ENST00000674488.1	1041	7	1332	5059	1332	-5059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATGCTGCAGTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	135675379	135663549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_135663618_135673471_135673613_135675074_135675158_135675297
ENSMUSG00000018595.7_135663596_135675436_1	chrX	-	385	4	ISM	ENSMUSG00000018595.7	ENST00000674488.1	1041	7	1275	5105	1275	-5105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGGATGGCTGTATGC	NA	NA	NA	NA	NA	NA	NA	NA	135675436	135663595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_135663618_135673471_135673613_135675074_135675158_135675297
ENSMUSG00000018595.7_135673562_135676247_1	chrX	-	371	4	ISM	ENSMUSG00000018595.7	ENST00000674488.1	1041	7	464	15071	464	-15071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCAAGTGGCTGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	135676247	135673561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_135673613_135675074_135675158_135675297_135675522_135676234
ENSMUSG00000018595.7_135675135_135676633_1	chrX	-	367	4	ISM	ENSMUSG00000018595.7	ENST00000674488.1	1041	7	78	16644	78	-16644	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGACCTCAAGAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	135676633	135675134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_135675158_135675297_135675522_135676234_135676303_135676581
ENSMUSG00000018604.19_119809349_119822130_1	chr5	+	3871	7	FSM	ENSMUSG00000018604.19	ENSMUST00000079719.11	4982	7	615	496	266	-496	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTAAACTTTAATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	119809348	119822130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ENSMUSG00000018604.19_119812151_119822459_1	chr5	+	3019	6	ISM	ENSMUSG00000018604.19	ENSMUST00000121021.8	4777	8	3224	330	3068	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGGGGGGGGGGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	119812150	119822459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ENSMUSG00000018634.11_104023911_104060780_1	chr11	+	423	5	ISM	ENSMUSG00000018634.11	ENST00000352855.9	1142	12	27	4574	27	-4574	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTCCCAGCTAGGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	104023910	104060780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_104023931_104044346_104044435_104054629_104054716_104059881_104059989_104060658
ENSMUSG00000018634.11_104044387_104061010_1	chr11	+	425	5	ISM	ENSMUSG00000018634.11	ENST00000352855.9	1142	12	20503	4344	42	-4344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGTGAGGGCTGCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	104044386	104061010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_104044435_104054629_104054716_104059881_104059989_104060658_104060780_104060947
ENSMUSG00000018634.11_104050141_104061355_1	chr11	+	575	6	ISM	ENSMUSG00000018634.11	ENST00000577353.5	1175	11	5796	3999	5796	-3999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAATGAAAAGTAAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	104050140	104061355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_104050198_104054629_104054716_104059881_104059989_104060658_104060780_104060947_104061102_104061305
ENSMUSG00000018634.11_104054629_104063809_1	chr11	+	603	6	ISM	ENSMUSG00000018634.11	ENST00000577353.5	1175	11	10284	1545	10284	-1545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGCCTCAGGAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	104054628	104063809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_104054716_104059881_104059989_104060658_104060780_104060947_104061102_104061305_104061367_104063736
ENSMUSG00000018634.11_104059944_104064472_1	chr11	+	592	7	ISM	ENSMUSG00000018634.11	ENST00000577353.5	1175	11	15599	882	15599	-882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTTCTTCGTCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	104059943	104064472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_104059989_104060658_104060780_104060947_104061102_104061305_104061367_104063736_104063810_104064131_104064218_104064420
ENSMUSG00000018634.11_104060656_104064217_1	chr11	+	498	5	ISM	ENSMUSG00000018634.11	ENST00000577353.5	1175	11	16311	1137	16311	-1137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTGGCTCCCCGGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	104060655	104064217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_104060780_104060947_104061102_104061305_104061367_104063736_104063810_104064131
ENSMUSG00000018634.11_104060947_104064556_1	chr11	+	511	5	ISM	ENSMUSG00000018634.11	ENST00000577353.5	1175	11	16602	798	16602	-798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTCCATCCCTCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	104060946	104064556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_104061102_104061305_104061367_104063736_104063810_104064131_104064218_104064420
ENSMUSG00000018634.11_104061072_104065228_1	chr11	+	443	7	ISM	ENSMUSG00000018634.11	ENST00000352855.9	1142	12	37188	126	16727	-126	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAAGAGGTGGCGGCGATG	NA	NA	NA	NA	NA	NA	NA	NA	104061071	104065228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_104061102_104061305_104061367_104063736_104063810_104064131_104064218_104064420_104064557_104064714_104064757_104065213
ENSMUSG00000018634.11_104061341_104065276_1	chr11	+	426	6	ISM	ENSMUSG00000018634.11	ENST00000352855.9	1142	12	37457	78	16996	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCCGCGCCATGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	104061340	104065276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_104061367_104063736_104063810_104064131_104064218_104064420_104064557_104064714_104064757_104065213
ENSMUSG00000018659.13_96829734_96834605_1	chr11	-	575	6	FSM	ENSMUSG00000018659.13	ENST00000225573.5	755	6	181	-1	179	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGAATGTTGGGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	96834605	96829733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_96829910_96830080_96830152_96830841_96830896_96831681_96831782_96833235_96833361_96834556
ENSMUSG00000018659.13_96829734_96834784_1	chr11	-	827	6	NNC	ENSMUSG00000018659.13	novel	830	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGAATGTTGGGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	96834784	96829733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_96829910_96830080_96830152_96830473_96830603_96831681_96831782_96833235_96833361_96834558
ENSMUSG00000018659.13_96829734_96834784_2	chr11	-	828	6	NNC	ENSMUSG00000018659.13	novel	830	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	980	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGAATGTTGGGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	96834784	96829733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_96829910_96830080_96830152_96830473_96830603_96831681_96831782_96833236_96833361_96834556
ENSMUSG00000018659.13_96829734_96834784_3	chr11	-	829	6	FSM	ENSMUSG00000018659.13	ENST00000434554.7	830	6	2	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGAATGTTGGGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	96834784	96829733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_96829910_96830080_96830152_96830473_96830603_96831681_96831782_96833235_96833361_96834556
ENSMUSG00000018659.13_96829734_96834784_4	chr11	-	821	6	NNC	ENSMUSG00000018659.13	novel	830	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGAATGTTGGGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	96834784	96829733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_96829910_96830080_96830144_96830473_96830603_96831681_96831782_96833235_96833361_96834556
ENSMUSG00000018659.13_96829734_96834784_5	chr11	-	827	6	NNC	ENSMUSG00000018659.13	novel	830	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	888	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGAATGTTGGGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	96834784	96829733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_96829910_96830080_96830152_96830473_96830603_96831683_96831782_96833235_96833361_96834556
ENSMUSG00000018659.13_96829734_96834784_6	chr11	-	820	6	NNC	ENSMUSG00000018659.13	novel	830	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGAATGTTGGGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	96834784	96829733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_96829910_96830080_96830152_96830473_96830603_96831681_96831782_96833235_96833352_96834556
ENSMUSG00000018661.18_113543055_113543403_1	chr11	+	214	2	ISM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	3060	10370	2901	-9822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGGCTACCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	113543054	113543403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_113543233_113543367
ENSMUSG00000018661.18_113543180_113543524_1	chr11	+	210	2	ISM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	3185	10249	3026	-9701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCATCCCACTGGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	113543179	113543524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_113543233_113543367
ENSMUSG00000018666.14_96680001_96693945_1	chr11	+	926	4	FSM	ENSMUSG00000018666.14	ENSMUST00000018810.10	1824	4	48	850	16	-850	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTTCTGTTAAGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	96680000	96693945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553
ENSMUSG00000018666.14_96680075_96694067_1	chr11	+	974	4	FSM	ENSMUSG00000018666.14	ENSMUST00000018810.10	1824	4	122	728	0	-728	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGGAAAGAAAGAATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	96680074	96694067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553
ENSMUSG00000018666.14_96691634_96694181_1	chr11	+	946	3	ISM	ENSMUSG00000018666.14	ENSMUST00000018810.10	1824	4	11681	614	11559	-614	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTCTGCTGTGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	96691633	96694181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96691774_96692254_96692433_96693553
ENSMUSG00000018666.14_96691681_96694240_1	chr11	+	958	3	ISM	ENSMUSG00000018666.14	ENSMUST00000018810.10	1824	4	11728	555	11606	-555	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTAGCACTGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	96691680	96694240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96691774_96692254_96692433_96693553
ENSMUSG00000018666.14_96692261_96694345_1	chr11	+	964	2	ISM	ENSMUSG00000018666.14	ENSMUST00000018810.10	1824	4	12308	450	12186	-450	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAATGGGAAACTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	96692260	96694345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96692433_96693553
ENSMUSG00000018666.14_96692339_96694380_1	chr11	+	921	2	ISM	ENSMUSG00000018666.14	ENSMUST00000018810.10	1824	4	12386	415	12264	-415	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACCACTATCATATTTG	NA	NA	NA	NA	NA	NA	NA	NA	96692338	96694380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96692433_96693553
ENSMUSG00000018669.15_96798252_96799584_1	chr11	-	914	3	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	7738	0	7738	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCACCTTTACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	96799584	96798251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96798949_96799055_96799228_96799539
ENSMUSG00000018669.15_96798252_96799745_1	chr11	-	1075	3	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	7577	0	7577	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCACCTTTACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	96799745	96798251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96798949_96799055_96799228_96799539
ENSMUSG00000018669.15_96798354_96800781_1	chr11	-	988	4	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	6541	102	6541	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGCAGAGGTGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	96800781	96798353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766
ENSMUSG00000018669.15_96798405_96800835_1	chr11	-	991	4	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	6487	153	6487	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGCCCCAGTCGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	96800835	96798404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766
ENSMUSG00000018669.15_96798468_96801551_1	chr11	-	1017	5	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	5771	216	5771	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGCATGTGGTTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	96801551	96798467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482
ENSMUSG00000018669.15_96798489_96800855_1	chr11	-	927	4	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	6467	237	6467	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCATAAGCATTTATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	96800855	96798488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766
ENSMUSG00000018669.15_96798642_96802425_1	chr11	-	1006	7	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	4897	390	4897	-390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	96802425	96798641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377
ENSMUSG00000018669.15_96798642_96802476_1	chr11	-	1057	7	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	4846	390	4846	-390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	96802476	96798641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377
ENSMUSG00000018669.15_96798800_96802735_1	chr11	-	982	8	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	4587	548	4587	-548	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAAGAAGTCAGGCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	96802735	96798799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698
ENSMUSG00000018669.15_96798843_96802795_1	chr11	-	999	8	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	4527	591	4527	-591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGAGGTGGGACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	96802795	96798842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698
ENSMUSG00000018669.15_96798921_96803067_1	chr11	-	986	9	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	4255	669	4255	-669	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCGTCCTGTGAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	96803067	96798920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042
ENSMUSG00000018669.15_96799134_96803200_1	chr11	-	1013	8	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	4122	882	4122	-882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCGCTTCAGGAGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	96803200	96799133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042
ENSMUSG00000018669.15_96799686_96804548_1	chr11	-	1002	10	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	2774	1434	2774	-1434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCAGTTCCAGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	96804548	96799685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490
ENSMUSG00000018669.15_96800767_96807022_1	chr11	-	1062	10	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	300	2515	300	-2515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGCCTTCTGGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	96807022	96800766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976
ENSMUSG00000018669.15_96801483_96807322_1	chr11	-	1086	10	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	0	3231	0	-3231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGCCCTGTCCCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	96807322	96801482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ENSMUSG00000018672.16_96740707_96748417_1	chr11	+	584	8	ISM	ENSMUSG00000018672.16	ENSMUST00000018816.14	930	9	5	3612	5	-3612	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCTCATGCATCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	96740706	96748417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96740823_96741498_96741568_96744260_96744343_96744883_96744976_96745409_96745466_96746081_96746160_96747497_96747550_96748378
ENSMUSG00000018672.16_96741498_96751795_1	chr11	+	576	8	ISM	ENSMUSG00000018672.16	ENSMUST00000018816.14	930	9	796	234	796	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATCTCAAGACGCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	96741497	96751795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96741568_96744260_96744343_96744883_96744976_96745409_96745466_96746081_96746160_96747497_96747550_96748378_96748418_96751688
ENSMUSG00000018672.16_96745408_96752029_1	chr11	+	568	5	ISM	ENSMUSG00000018672.16	ENSMUST00000018816.14	930	9	4706	0	4706	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	991	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCCTTTCTTGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	96745407	96752029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96745466_96746081_96746160_96747497_96747550_96748378_96748418_96751688
ENSMUSG00000018677.10_102294243_102297428_1	chr11	-	977	10	FSM	ENSMUSG00000018677.10	ENST00000537904.6	1032	10	55	0	55	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGGGAGCAACCGGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	102297428	102294242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296629_102297187_102297248_102297380
ENSMUSG00000018677.10_102294243_102297483_1	chr11	-	1027	10	NNC	ENSMUSG00000018677.10	novel	1032	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGGGAGCAACCGGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	102297483	102294242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296624_102297187_102297248_102297380
ENSMUSG00000018677.10_102294243_102297483_2	chr11	-	1027	10	NNC	ENSMUSG00000018677.10	novel	1032	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGGGAGCAACCGGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	102297483	102294242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_102294362_102294458_102294535_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296629_102297187_102297248_102297380
ENSMUSG00000018678.14_96852586_96868537_1	chr11	-	413	3	NNC	ENSMUSG00000018678.14	novel	834	3	NA	NA	0	-363	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATCCAGAACCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	96868537	96852585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_96852827_96854186_96854268_96868446
ENSMUSG00000018678.14_96852586_96868537_2	chr11	-	421	3	ISM	ENSMUSG00000018678.14	ENSMUST00000107624.8	3055	7	0	8419	0	-363	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATCCAGAACCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	96868537	96852585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96852836_96854190_96854271_96868446
ENSMUSG00000018697.15_84336497_84361436_1	chr11	-	236	4	ISM	ENSMUSG00000018697.15	ENST00000616434.2	1689	11	42975	3106	42912	-3106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGCAAGAAGGTAGATAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	84361436	84336496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84336534_84339945_84340014_84358286_84358371_84361389
ENSMUSG00000018697.15_84358287_84401243_1	chr11	-	920	6	ISM	ENSMUSG00000018697.15	ENSMUST00000018841.3	1822	13	3105	44606	3105	-24896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1695	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGCTTTTCCTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	84401243	84358286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024
ENSMUSG00000018697.15_84361389_84402404_1	chr11	-	933	6	ISM	ENSMUSG00000018697.15	ENSMUST00000018841.3	1822	13	1944	47708	1944	-27998	internal_fragment	TRUE	canonical	NA	NA	NA	NA	1537	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAACTCGGGATGCACGC	NA	NA	NA	NA	NA	NA	NA	NA	84402404	84361388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308
ENSMUSG00000018697.15_84361441_84362029_1	chr11	-	230	2	ISM	ENSMUSG00000018697.15	ENST00000616434.2	1689	11	42382	28050	42319	-28050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGGAGCCAGTCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	84362029	84361440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84361555_84361913
ENSMUSG00000018697.15_84361950_84403155_1	chr11	-	920	6	ISM	ENSMUSG00000018697.15	ENSMUST00000018841.3	1822	13	1193	48269	1193	-28559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1794	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAACCAAGCTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	84403155	84361949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966
ENSMUSG00000018697.15_84362010_84401042_1	chr11	-	236	3	ISM	ENSMUSG00000018697.15	ENST00000616434.2	1689	11	3369	28619	3306	-28619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCAAAGCGCTTTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	84401042	84362009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84362113_84363877_84363993_84401024
ENSMUSG00000018697.15_84362070_84401090_1	chr11	-	224	3	ISM	ENSMUSG00000018697.15	ENST00000616434.2	1689	11	3321	28679	3258	-28679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACAACGAAAGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	84401090	84362069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84362113_84363877_84363993_84401024
ENSMUSG00000018697.15_84362099_84401173_1	chr11	-	278	3	ISM	ENSMUSG00000018697.15	ENST00000616434.2	1689	11	3238	28708	3175	-28708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGATGATGAGCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	84401173	84362098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84362113_84363877_84363993_84401024
ENSMUSG00000018697.15_84401162_84402340_1	chr11	-	220	2	ISM	ENSMUSG00000018697.15	ENST00000616434.2	1689	11	2071	67771	2008	-67771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGACTTAGAAGGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	84402340	84401161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84401244_84402202
ENSMUSG00000018697.15_84402279_84403077_1	chr11	-	237	2	ISM	ENSMUSG00000018697.15	ENST00000616434.2	1689	11	1334	68888	1271	-68888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAGGAGAGACTGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	84403077	84402278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84402405_84402966
ENSMUSG00000018697.15_84403004_84404214_1	chr11	-	249	2	ISM	ENSMUSG00000018697.15	ENST00000616434.2	1689	11	197	69613	134	-69613	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACCATTGGGAGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	84404214	84403003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84403156_84404117
ENSMUSG00000018707.14_110582821_110586834_1	chr12	+	1812	5	ISM	ENSMUSG00000018707.14	ENST00000644881.2	14073	77	14784	46402	14784	-46402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTCCACAAGTCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	110582820	110586834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110583046_110583131_110583360_110584053_110585131_110585622_110585803_110586732
ENSMUSG00000018707.14_110621910_110627379_1	chr12	+	1806	12	ISM	ENSMUSG00000018707.14	ENST00000644881.2	14073	77	53873	5857	53873	-5857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGCCTCTCGACCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	110621909	110627379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257
ENSMUSG00000018736.15_68712936_68717031_1	chr11	-	592	2	ISM	ENSMUSG00000018736.15	ENST00000402554.7	1832	10	26868	153	26836	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCCTGCAGTTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	68717031	68712935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68713492_68716995
ENSMUSG00000018736.15_68713153_68724271_1	chr11	-	583	3	ISM	ENSMUSG00000018736.15	ENSMUST00000018880.14	2382	9	19690	893	19596	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCACAAGTGATACATACG	NA	NA	NA	NA	NA	NA	NA	NA	68724271	68713152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68713492_68720740_68720893_68724179
ENSMUSG00000018736.15_68713153_68724271_2	chr11	-	618	4	ISM	ENSMUSG00000018736.15	ENST00000402554.7	1832	10	19628	370	19596	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCACAAGTGATACATACG	NA	NA	NA	NA	NA	NA	NA	NA	68724271	68713152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68713492_68716995_68717031_68720740_68720893_68724179
ENSMUSG00000018736.15_68713153_68743889_1	chr11	-	423	4	NNC	ENSMUSG00000018736.15	novel	454	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCACAAGTGATACATACG	NA	NA	NA	NA	NA	NA	NA	NA	68743889	68713152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_68713272_68734716_68734801_68736152_68736251_68743767
ENSMUSG00000018736.15_68713153_68743889_2	chr11	-	418	4	NNC	ENSMUSG00000018736.15	novel	454	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCACAAGTGATACATACG	NA	NA	NA	NA	NA	NA	NA	NA	68743889	68713152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_68713272_68734721_68734801_68736152_68736251_68743767
ENSMUSG00000018736.15_68713153_68743889_3	chr11	-	423	4	NNC	ENSMUSG00000018736.15	novel	454	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCACAAGTGATACATACG	NA	NA	NA	NA	NA	NA	NA	NA	68743889	68713152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_68713277_68734721_68734801_68736152_68736251_68743767
ENSMUSG00000018736.15_68713256_68727037_1	chr11	-	542	4	ISM	ENSMUSG00000018736.15	ENSMUST00000018880.14	2382	9	16924	996	16830	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGGGCCCTGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	68727037	68713255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68713492_68720740_68720893_68724179_68724272_68726975
ENSMUSG00000018736.15_68713426_68730791_1	chr11	-	579	5	ISM	ENSMUSG00000018736.15	ENSMUST00000018880.14	2382	9	13170	1166	13076	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGGTATGCTGCCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	68730791	68713425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68713492_68720740_68720893_68724179_68724272_68726975_68727150_68730696
ENSMUSG00000018736.15_68713439_68730752_1	chr11	-	562	6	ISM	ENSMUSG00000018736.15	ENST00000402554.7	1832	10	13147	656	13115	-286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATCGTCAGCACCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	68730752	68713438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68713492_68716995_68717031_68720740_68720893_68724179_68724272_68726975_68727150_68730696
ENSMUSG00000018736.15_68727008_68734800_1	chr11	-	582	4	ISM	ENSMUSG00000018736.15	ENSMUST00000108672.2	1653	8	9067	6864	9067	-6864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCACAGAAAACAGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	68734800	68727007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68727150_68730696_68730834_68732845_68732995_68734646
ENSMUSG00000018761.15_69547523_69548566_1	chr11	-	759	3	ISM	ENSMUSG00000018761.15	ENSMUST00000018905.12	1321	7	4902	0	4902	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTAGTGTGCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	69548566	69547522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69548155_69548245_69548357_69548550
ENSMUSG00000018761.15_69547787_69548847_1	chr11	-	684	4	ISM	ENSMUSG00000018761.15	ENSMUST00000018905.12	1321	7	4621	264	4621	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGACCAAGGACAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	69548847	69547786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761
ENSMUSG00000018761.15_69547955_69553330_1	chr11	-	751	7	FSM	ENSMUSG00000018761.15	ENSMUST00000018905.12	1321	7	138	432	138	-432	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGTAAGCACCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	69553330	69547954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
ENSMUSG00000018761.15_69548245_69553468_1	chr11	-	690	6	ISM	ENSMUSG00000018761.15	ENSMUST00000018905.12	1321	7	0	722	0	-722	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCACCTTCTGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	69553468	69548244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69548357_69548550_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
ENSMUSG00000018770.10_73738791_73741340_1	chr2	-	565	4	NNC	ENSMUSG00000018770.10	novel	723	5	NA	NA	301	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	73741340	73738790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_73739052_73739537_73739722_73740207_73740286_73741298
ENSMUSG00000018770.10_73738791_73741669_1	chr2	-	706	5	NNC	ENSMUSG00000018770.10	novel	723	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	73741669	73738790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_73739052_73739527_73739722_73740207_73740279_73741298_73741405_73741595
ENSMUSG00000018770.10_73739662_73741669_1	chr2	-	328	4	ISM	ENSMUSG00000018770.10	ENSMUST00000111996.8	723	5	0	871	0	-871	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACCAGTGTAATCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	73741669	73739661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73739722_73740207_73740286_73741298_73741405_73741585
ENSMUSG00000018770.10_73739662_73741669_2	chr2	-	336	4	ISM	ENSMUSG00000018770.10	ENST00000409194.5	749	5	-28	917	0	-871	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACCAGTGTAATCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	73741669	73739661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73739722_73740207_73740286_73741298_73741423_73741595
ENSMUSG00000018796.14_46944003_46987591_1	chr8	+	2401	21	NNC	ENSMUSG00000018796.14	novel	2458	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGCAGCGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46944002	46987591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_46944199_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974446_46974525_46977979_46978115_46979280_46979416_46980226_46980323_46981617_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ENSMUSG00000018796.14_46944003_46987591_2	chr8	+	2395	21	NNC	ENSMUSG00000018796.14	novel	2458	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGCAGCGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46944002	46987591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_46944199_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971492_46971538_46971997_46972072_46974446_46974525_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ENSMUSG00000018796.14_46944003_46987591_3	chr8	+	2395	21	NNC	ENSMUSG00000018796.14	novel	2458	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGCAGCGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46944002	46987591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_46944199_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974446_46974525_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987383
ENSMUSG00000018796.14_46944003_46987591_4	chr8	+	2402	21	FSM	ENSMUSG00000018796.14	ENST00000513317.5	2458	21	56	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGCAGCGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46944002	46987591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_46944199_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974446_46974525_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ENSMUSG00000018796.14_46944003_46987591_5	chr8	+	2397	21	NNC	ENSMUSG00000018796.14	novel	2458	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGCAGCGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46944002	46987591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_46944199_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974446_46974525_46977979_46978115_46979280_46979416_46980231_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ENSMUSG00000018796.14_46944003_46987591_6	chr8	+	2397	21	NNC	ENSMUSG00000018796.14	novel	2458	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2059	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGCAGCGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46944002	46987591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_46944199_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974446_46974525_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983508_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ENSMUSG00000018796.14_46944003_46987591_7	chr8	+	2397	21	NNC	ENSMUSG00000018796.14	novel	2458	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGCAGCGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46944002	46987591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_46944199_46945836_46946064_46958685_46958799_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974446_46974525_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ENSMUSG00000018796.14_46944003_46987591_9	chr8	+	2395	21	NNC	ENSMUSG00000018796.14	novel	2458	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1964	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGCAGCGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46944002	46987591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_46944199_46945836_46946064_46958685_46958804_46961369_46961435_46964403_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974446_46974525_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ENSMUSG00000018796.14_46944011_46987591_1	chr8	+	2393	21	NNC	ENSMUSG00000018796.14	novel	2458	21	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGCAGCGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46944010	46987591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_46944199_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974446_46974525_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986602_46986674_46987376
ENSMUSG00000018796.14_46944011_46987591_2	chr8	+	2392	21	NNC	ENSMUSG00000018796.14	novel	2458	21	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGCAGCGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46944010	46987591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_46944199_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974446_46974525_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984826_46984969_46986402_46986505_46986601_46986674_46987376
ENSMUSG00000018796.14_46944011_46987591_3	chr8	+	2394	21	FSM	ENSMUSG00000018796.14	ENST00000513317.5	2458	21	64	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGCAGCGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46944010	46987591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_46944199_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974446_46974525_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ENSMUSG00000018796.14_46945869_46984055_1	chr8	+	1471	15	ISM	ENSMUSG00000018796.14	ENST00000507295.5	2376	19	34	3806	0	-3462	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAACAGCTGAAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	46945868	46984055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46946064_46958685_46958804_46961369_46961435_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006
ENSMUSG00000018809.3_75239259_75282053_1	chr11	+	1856	5	ISM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	0	14478	0	-14478	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCAGAAATGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75239258	75282053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897
ENSMUSG00000018809.3_75239435_75290486_1	chr11	+	1740	6	ISM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	176	6045	176	-6045	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTCAGCCTCCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	75239434	75290486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426
ENSMUSG00000018809.3_75239491_75290567_1	chr11	+	1765	6	ISM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	232	5964	232	-5964	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAGAGGATCGCAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	75239490	75290567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426
ENSMUSG00000018809.3_75240537_75291175_1	chr11	+	1746	6	ISM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	1278	5356	1278	-5356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCTGTGGGGCCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	75240536	75291175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107
ENSMUSG00000018809.3_75273124_75293009_1	chr11	+	1756	6	ISM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	33865	3522	33865	-3522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGCCTGCAGGACCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	75273123	75293009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943
ENSMUSG00000018809.3_75273170_75293066_1	chr11	+	1767	6	ISM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	33911	3465	33911	-3465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAACCAGGTGAGATTGG	NA	NA	NA	NA	NA	NA	NA	NA	75273169	75293066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943
ENSMUSG00000018809.3_75278297_75294051_1	chr11	+	1783	6	ISM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	39038	2480	39038	-2480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGCTACCTTAGGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	75278296	75294051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934
ENSMUSG00000018809.3_75280926_75294281_1	chr11	+	1764	6	ISM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	41667	2250	41667	-2250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGTGGTTGAAACTCGC	NA	NA	NA	NA	NA	NA	NA	NA	75280925	75294281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242
ENSMUSG00000018809.3_75280986_75294324_1	chr11	+	1747	6	ISM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	41727	2207	41727	-2207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCATGAGCTCTTCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	75280985	75294324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242
ENSMUSG00000018809.3_75281067_75294366_1	chr11	+	1708	6	ISM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	41808	2165	41808	-2165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCCTTTCTTTTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	75281066	75294366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242
ENSMUSG00000018809.3_75281925_75296531_1	chr11	+	1790	7	ISM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	42666	0	42666	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTATTGGTTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	75281924	75296531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ENSMUSG00000018809.3_75282006_75296533_1	chr11	+	1711	7	ISM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	42747	-2	42747	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATTGGTTTCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	75282005	75296533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ENSMUSG00000018819.11_142025747_142043129_1	chr7	+	963	7	ISM	ENSMUSG00000018819.11	ENSMUST00000038946.9	1828	11	167	5207	-141	-5207	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGCCACTGAGGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	142025746	142043129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_142026102_142038215_142038363_142040083_142040243_142042155_142042253_142042584_142042678_142042865_142042910_142043061
ENSMUSG00000018819.11_142026009_142043720_1	chr7	+	781	8	ISM	ENSMUSG00000018819.11	ENSMUST00000105966.2	1503	11	121	4617	121	-4616	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAGGAGAAGTGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	142026008	142043720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_142026102_142038215_142038363_142040083_142040243_142042155_142042253_142042602_142042678_142042865_142042910_142043061_142043144_142043636
ENSMUSG00000018819.11_142026049_142044374_1	chr7	+	967	10	ISM	ENSMUSG00000018819.11	ENSMUST00000038946.9	1828	11	469	3962	161	-3962	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACCATAGACCATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	142026048	142044374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_142026102_142038215_142038363_142040083_142040243_142042155_142042253_142042584_142042678_142042865_142042910_142043061_142043144_142043636_142043772_142044081_142044160_142044295
ENSMUSG00000018819.11_142038230_142047991_1	chr7	+	947	10	ISM	ENSMUSG00000018819.11	ENSMUST00000038946.9	1828	11	12650	345	7480	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTCCCAGCCCTGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	142038229	142047991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_142038363_142040083_142040243_142042155_142042253_142042584_142042678_142042865_142042910_142043061_142043144_142043636_142043772_142044081_142044160_142044295_142044403_142047972
ENSMUSG00000018819.11_142038325_142048114_1	chr7	+	975	10	ISM	ENSMUSG00000018819.11	ENSMUST00000038946.9	1828	11	12745	222	7575	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCCTTTGACCAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	142038324	142048114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_142038363_142040083_142040243_142042155_142042253_142042584_142042678_142042865_142042910_142043061_142043144_142043636_142043772_142044081_142044160_142044295_142044403_142047972
ENSMUSG00000018819.11_142040183_142048254_1	chr7	+	978	9	ISM	ENSMUSG00000018819.11	ENSMUST00000038946.9	1828	11	14603	82	9433	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGAATGCTCAGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	142040182	142048254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_142040243_142042155_142042253_142042584_142042678_142042865_142042910_142043061_142043144_142043636_142043772_142044081_142044160_142044295_142044403_142047972
ENSMUSG00000018820.14_42159997_42177682_1	chr19	+	700	6	ISM	ENSMUSG00000018820.14	ENST00000370613.7	911	8	11	2220	11	-2220	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCTGCTGCTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	42159996	42177682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_42160183_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635
ENSMUSG00000018820.14_42159997_42177682_2	chr19	+	1107	10	ISM	ENSMUSG00000018820.14	ENST00000423811.3	1318	12	11	2220	11	-2220	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCTGCTGCTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	42159996	42177682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172539_42172629_42174058_42174080_42174243_42174389_42177635
ENSMUSG00000018820.14_42159997_42179821_1	chr19	+	1209	11	NNC	ENSMUSG00000018820.14	novel	1280	11	NA	NA	11	-81	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGAGAGCACGCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	42159996	42179821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174222_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_42160074_42178014_1	chr19	+	1067	10	NNC	ENSMUSG00000018820.14	novel	1318	12	NA	NA	88	-1888	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCAGGTCCTCTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	42160073	42178014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172539_42172633_42174243_42174389_42177635_42177683_42177960
ENSMUSG00000018820.14_42160074_42179821_1	chr19	+	1132	12	FSM	ENSMUSG00000018820.14	ENST00000393677.8	1301	12	88	81	88	-81	multi-exon	FALSE	canonical	NA	NA	NA	NA	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGAGAGCACGCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	42160073	42179821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174058_42174080_42174243_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_42160074_42179821_2	chr19	+	1124	11	NNC	ENSMUSG00000018820.14	novel	1280	11	NA	NA	88	-81	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGAGAGCACGCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	42160073	42179821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174230_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_42160074_42179821_3	chr19	+	1111	11	FSM	ENSMUSG00000018820.14	ENST00000359980.5	1280	11	88	81	88	-81	multi-exon	FALSE	canonical	NA	NA	NA	NA	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGAGAGCACGCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	42160073	42179821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_42160074_42179902_1	chr19	+	1210	11	NNC	ENSMUSG00000018820.14	novel	1280	11	NA	NA	88	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGCTGATCTTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	42160073	42179902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172647_42174243_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_42160074_42179902_2	chr19	+	1213	11	NNC	ENSMUSG00000018820.14	novel	1280	11	NA	NA	88	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGCTGATCTTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	42160073	42179902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174222_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_42160134_42178014_1	chr19	+	617	7	ISM	ENSMUSG00000018820.14	ENST00000370613.7	911	8	148	1888	148	-1888	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCAGGTCCTCTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	42160133	42178014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_42160183_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960
ENSMUSG00000018820.14_42160134_42178014_2	chr19	+	1024	10	NNC	ENSMUSG00000018820.14	novel	1318	12	NA	NA	148	-1888	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCAGGTCCTCTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	42160133	42178014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172539_42172629_42174222_42174389_42177635_42177683_42177960
ENSMUSG00000018820.14_42160134_42179821_1	chr19	+	1089	12	FSM	ENSMUSG00000018820.14	ENST00000423811.3	1318	12	148	81	148	-81	multi-exon	FALSE	canonical	NA	NA	NA	NA	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGAGAGCACGCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	42160133	42179821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172539_42172629_42174058_42174080_42174243_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_42160134_42179821_3	chr19	+	1069	11	NNC	ENSMUSG00000018820.14	novel	1280	11	NA	NA	148	-81	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGAGAGCACGCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	42160133	42179821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172647_42174243_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_42160134_42179902_1	chr19	+	1145	11	NNC	ENSMUSG00000018820.14	novel	1280	11	NA	NA	148	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGCTGATCTTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	42160133	42179902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174230_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_42160134_42179902_2	chr19	+	1153	12	FSM	ENSMUSG00000018820.14	ENST00000393677.8	1301	12	148	0	148	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGCTGATCTTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	42160133	42179902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174058_42174080_42174243_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_42160134_42179902_3	chr19	+	1132	11	FSM	ENSMUSG00000018820.14	ENST00000359980.5	1280	11	148	0	148	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGCTGATCTTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	42160133	42179902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_42165826_42179821_1	chr19	+	1034	10	NNC	ENSMUSG00000018820.14	novel	1318	12	NA	NA	-1901	-81	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGAGAGCACGCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	42165825	42179821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172539_42172629_42174230_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_42165826_42179821_2	chr19	+	1025	10	NNC	ENSMUSG00000018820.14	novel	1318	12	NA	NA	-1901	-81	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGAGAGCACGCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	42165825	42179821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172539_42172633_42174243_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_42167727_42179902_1	chr19	+	1051	9	NNC	ENSMUSG00000018820.14	novel	1030	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGCTGATCTTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	42167726	42179902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172539_42172629_42174222_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_42167822_42179902_1	chr19	+	918	9	ISM	ENSMUSG00000018820.14	ENST00000359980.5	1280	11	7836	0	95	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGCTGATCTTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	42167821	42179902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_42171153_42174312_1	chr19	+	353	4	ISM	ENSMUSG00000018820.14	ENST00000370610.7	1030	9	3426	5590	3426	-5590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGAGGTGCTGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	42171152	42174312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_42171211_42171866_42172004_42172539_42172629_42174243
ENSMUSG00000018820.14_42171924_42179902_1	chr19	+	539	6	NNC	ENSMUSG00000018820.14	novel	911	8	NA	NA	4197	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGCTGATCTTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	42171923	42179902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177965_42178015_42179756
ENSMUSG00000018821.4_42112060_42113468_1	chr19	-	510	2	ISM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	4030	348	4030	-348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGACATCTGAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	42113468	42112059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_42112288_42113186
ENSMUSG00000018821.4_42112168_42117428_1	chr19	-	518	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	70	456	70	-456	multi-exon	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCCCCACAGGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	42117428	42112167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_42112288_42113186_42113466_42117309
ENSMUSG00000018821.4_42112222_42117428_1	chr19	-	464	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	70	510	70	-510	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTGGGAACTCCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	42117428	42112221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_42112288_42113186_42113466_42117309
ENSMUSG00000018821.4_42112263_42117447_1	chr19	-	442	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	51	551	51	-551	multi-exon	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACCCCCAGGCCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	42117447	42112262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_42112288_42113186_42113466_42117309
ENSMUSG00000018848.5_35699208_35724133_1	chr11	-	2039	14	ISM	ENSMUSG00000018848.5	ENSMUST00000018992.4	2109	15	1200	0	1200	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35724133	35699207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998
ENSMUSG00000018848.5_35699208_35724136_1	chr11	-	2033	14	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	1197	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35724136	35699207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712044_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998
ENSMUSG00000018848.5_35699208_35724136_2	chr11	-	2039	14	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	1197	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35724136	35699207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716929_35717299_35717405_35718184_35718294_35719451_35719641_35723998
ENSMUSG00000018848.5_35699208_35724136_3	chr11	-	2034	14	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	1197	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35724136	35699207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716821_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998
ENSMUSG00000018848.5_35699208_35724136_4	chr11	-	2029	14	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	1197	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35724136	35699207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_35699419_35699921_35700170_35700454_35700615_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998
ENSMUSG00000018848.5_35699208_35724136_5	chr11	-	2033	14	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	1197	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35724136	35699207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718285_35719451_35719641_35723998
ENSMUSG00000018848.5_35699208_35724136_6	chr11	-	2034	14	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	1197	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35724136	35699207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710798_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998
ENSMUSG00000018848.5_35699208_35725288_1	chr11	-	2057	15	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35725288	35699207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716929_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
ENSMUSG00000018848.5_35699208_35725288_2	chr11	-	2059	15	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35725288	35699207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724129_35725263
ENSMUSG00000018848.5_35699208_35725288_3	chr11	-	2058	15	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35725288	35699207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_35699413_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
ENSMUSG00000018848.5_35699208_35725288_4	chr11	-	2058	15	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35725288	35699207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718190_35718294_35719451_35719641_35723998_35724134_35725263
ENSMUSG00000018849.7_35729715_35870883_1	chr11	-	3572	23	FSM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	471	488	471	-488	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGGGAAAGAATTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	35870883	35729714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ENSMUSG00000018849.7_35729894_35871067_1	chr11	-	3577	23	FSM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	287	667	287	-667	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCCGAGCGCTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	35871067	35729893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ENSMUSG00000018849.7_35731171_35871354_1	chr11	-	3652	22	ISM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	0	1944	0	-1944	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTAAGGAGCCCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	35871354	35731170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ENSMUSG00000018858.16_115294608_115301143_1	chr11	+	358	5	ISM	ENSMUSG00000018858.16	ENSMUST00000103036.5	749	6	25	602	12	-406	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAAAATTCGAGACATGA	NA	NA	NA	NA	NA	NA	NA	NA	115294607	115301143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115294700_115297376_115297414_115300305_115300366_115300885_115300969_115301057
ENSMUSG00000018858.16_115294608_115301143_2	chr11	+	456	4	ISM	ENSMUSG00000018858.16	ENST00000301585.10	638	5	12	406	12	-406	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAAAATTCGAGACATGA	NA	NA	NA	NA	NA	NA	NA	NA	115294607	115301143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115294835_115300305_115300366_115300885_115300969_115301057
ENSMUSG00000018858.16_115294648_115302218_1	chr11	+	1244	6	FSM	ENSMUSG00000018858.16	ENSMUST00000153983.8	2596	6	70	1282	52	473	multi-exon	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCATTTCACTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	115294647	115302218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115294787_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ENSMUSG00000018858.16_115294648_115302286_1	chr11	+	1312	6	FSM	ENSMUSG00000018858.16	ENSMUST00000153983.8	2596	6	70	1214	52	541	multi-exon	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGGGCATCAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	115294647	115302286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115294787_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ENSMUSG00000018858.16_115294754_115302337_1	chr11	+	1257	6	FSM	ENSMUSG00000018858.16	ENSMUST00000153983.8	2596	6	176	1163	158	592	multi-exon	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGCTTGGCCACAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	115294753	115302337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115294787_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ENSMUSG00000018858.16_115294755_115301550_1	chr11	+	480	5	FSM	ENSMUSG00000018858.16	ENST00000301585.10	638	5	159	-1	159	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGCCCTCCCTGCTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	115294754	115301550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115294835_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ENSMUSG00000018858.16_115301088_115302627_1	chr11	+	1304	2	ISM	ENSMUSG00000018858.16	ENSMUST00000106539.10	2522	5	6508	861	6492	-861	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCCCGGAGACCAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	115301087	115302627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115301228_115301463
ENSMUSG00000018861.9_115158850_115162189_1	chr11	-	1269	7	ISM	ENSMUSG00000018861.9	ENST00000582944.5	1393	11	4813	-283	4813	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2072	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGGCTGATAGCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	115162189	115158849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087
ENSMUSG00000018861.9_115159174_115162191_1	chr11	-	862	6	ISM	ENSMUSG00000018861.9	ENST00000583917.5	1332	10	4811	41	4811	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	925	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCGGCTGCTGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	115162191	115159173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115161148_115161257_115162087
ENSMUSG00000018861.9_115159174_115163108_1	chr11	-	1278	10	ISM	ENSMUSG00000018861.9	ENST00000413947.6	1472	12	4023	41	3894	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCGGCTGCTGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	115163108	115159173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012
ENSMUSG00000018861.9_115159403_115162597_1	chr11	-	869	6	ISM	ENSMUSG00000018861.9	ENST00000583917.5	1332	10	4405	270	4405	-270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGCCTAAAGCTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	115162597	115159402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115159575_115160270_115160443_115160522_115160723_115161148_115161257_115162087_115162190_115162482
ENSMUSG00000018861.9_115159403_115167008_1	chr11	-	1276	10	ISM	ENSMUSG00000018861.9	ENST00000413947.6	1472	12	123	270	-6	-270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2727	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGCCTAAAGCTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	115167008	115159402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904
ENSMUSG00000018861.9_115159430_115162722_1	chr11	-	861	7	ISM	ENSMUSG00000018861.9	ENST00000583917.5	1332	10	4280	297	4280	-297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAAGCCCTGCTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	115162722	115159429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115159575_115160270_115160443_115160522_115160723_115161148_115161257_115162087_115162190_115162482_115162597_115162702
ENSMUSG00000018861.9_115159494_115162156_1	chr11	-	715	6	ISM	ENSMUSG00000018861.9	ENST00000582944.5	1393	11	4846	361	4846	-361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGCTGCTGGAGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	115162156	115159493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087
ENSMUSG00000018861.9_115159517_115162748_1	chr11	-	800	7	ISM	ENSMUSG00000018861.9	ENST00000583917.5	1332	10	4254	384	4254	-384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGACAGCTTCCTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	115162748	115159516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115159575_115160270_115160443_115160522_115160723_115161148_115161257_115162087_115162190_115162482_115162597_115162702
ENSMUSG00000018861.9_115159534_115167740_1	chr11	-	1251	11	ISM	ENSMUSG00000018861.9	ENSMUST00000021078.3	1948	12	136	684	136	-401	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2057	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATCACCACAACCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	115167740	115159533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167634
ENSMUSG00000018861.9_115160270_115162596_1	chr11	-	782	6	ISM	ENSMUSG00000018861.9	ENST00000582944.5	1393	11	4406	1137	4406	-1137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATGGTGAGCGAAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	115162596	115160269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482
ENSMUSG00000018861.9_115160387_115162745_1	chr11	-	708	7	ISM	ENSMUSG00000018861.9	ENST00000582944.5	1393	11	4257	1254	4257	-1254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTGCTGCTGAGCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	115162745	115160386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702
ENSMUSG00000018861.9_115160409_115166920_1	chr11	-	793	8	ISM	ENSMUSG00000018861.9	ENST00000583917.5	1332	10	82	1276	82	-1276	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACGTGGAGGACCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	115166920	115160408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115160443_115160522_115160723_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904
ENSMUSG00000018861.9_115160614_115163071_1	chr11	-	694	7	NNC	ENSMUSG00000018861.9	novel	1948	12	NA	NA	3931	-1481	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTTTTTCCGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	115163071	115160613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163018
ENSMUSG00000018861.9_115160841_115163110_1	chr11	-	606	6	ISM	ENSMUSG00000018861.9	ENST00000582944.5	1393	11	3892	1708	3892	-1708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGGCCAAGTCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	115163110	115160840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162802_115163012
ENSMUSG00000018861.9_115160905_115167129_1	chr11	-	715	8	ISM	ENSMUSG00000018861.9	ENST00000413947.6	1472	12	2	1772	2	-1772	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGGAACCCGGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	115167129	115160904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167082
ENSMUSG00000018861.9_115161148_115167010_1	chr11	-	626	6	ISM	ENSMUSG00000018861.9	ENST00000582944.5	1393	11	-8	2015	-8	-2015	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGGGCCCAGAAGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	115167010	115161147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115161257_115162087_115162190_115162482_115162597_115162702_115162802_115163012_115163109_115166904
ENSMUSG00000018882.13_97206542_97216583_1	chr11	+	668	5	ISM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	0	4163	0	-4163	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTTTTCATTCTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	97206541	97216583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534
ENSMUSG00000018882.13_97206734_97217757_1	chr11	+	626	6	ISM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	192	2989	192	-2989	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGATCACTGTTCGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	97206733	97217757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607
ENSMUSG00000018882.13_97207570_97218959_1	chr11	+	645	6	ISM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	1028	1787	1028	-1787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGCCCAAGGATGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	97207569	97218959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911
ENSMUSG00000018882.13_97212265_97219333_1	chr11	+	620	6	ISM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	5723	1413	5723	-1413	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCTGGGAGGAGTACG	NA	NA	NA	NA	NA	NA	NA	NA	97212264	97219333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
ENSMUSG00000018882.13_97212334_97219372_1	chr11	+	590	6	ISM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	5792	1374	5792	-1374	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAAGCCTCAGCTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	97212333	97219372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
ENSMUSG00000018882.13_97212372_97219435_1	chr11	+	615	6	ISM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	5830	1311	5830	-1311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTAATCCCAGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	97212371	97219435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
ENSMUSG00000018882.13_97218955_97219770_1	chr11	+	594	2	ISM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	12413	976	12413	-976	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCAGCTTCTGAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	97218954	97219770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97219086_97219307
ENSMUSG00000018899.18_53660932_53667293_1	chr11	+	1189	10	FSM	ENSMUSG00000018899.18	ENSMUST00000108920.10	2136	10	91	856	54	-856	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTCCTGAGTGAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	53660931	53667293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_53661105_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
ENSMUSG00000018899.18_53663665_53667475_1	chr11	+	1106	8	ISM	ENSMUSG00000018899.18	ENSMUST00000019043.13	2069	10	2344	674	2344	-674	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCCCTGACTCCTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	53663664	53667475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
ENSMUSG00000018899.18_53664560_53667616_1	chr11	+	1069	7	ISM	ENSMUSG00000018899.18	ENSMUST00000019043.13	2069	10	3239	533	3239	-533	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGCGCCCACAGAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	53664559	53667616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
ENSMUSG00000018899.18_53664762_53667723_1	chr11	+	1067	6	ISM	ENSMUSG00000018899.18	ENSMUST00000019043.13	2069	10	3441	426	3441	-426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCCCTGGGATGGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	53664761	53667723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
ENSMUSG00000018899.18_53664920_53667856_1	chr11	+	1128	5	ISM	ENSMUSG00000018899.18	ENSMUST00000019043.13	2069	10	3599	293	3599	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCACTTTCTCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	53664919	53667856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
ENSMUSG00000018899.18_53664996_53667890_1	chr11	+	1086	5	ISM	ENSMUSG00000018899.18	ENSMUST00000019043.13	2069	10	3675	259	3675	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAGAGGTGTACACTAA	NA	NA	NA	NA	NA	NA	NA	NA	53664995	53667890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
ENSMUSG00000018899.18_53666742_53668150_1	chr11	+	1150	2	ISM	ENSMUSG00000018899.18	ENSMUST00000019043.13	2069	10	5421	-1	5421	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTGGCTTTTTATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	53666741	53668150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53666880_53667138
ENSMUSG00000018900.8_53755897_53782058_1	chr11	-	2105	10	FSM	ENSMUSG00000018900.8	ENSMUST00000019044.8	3062	10	428	529	428	-529	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGAAGGAAATGTATG	NA	NA	NA	NA	NA	NA	NA	NA	53782058	53755896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53774486_53774591_53781972
ENSMUSG00000018906.15_53992442_54005100_1	chr11	+	525	5	ISM	ENSMUSG00000018906.15	ENSMUST00000019050.12	2230	16	653	17378	625	-17378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACACACCTCCATTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	53992441	54005100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962
ENSMUSG00000018906.15_54002351_54010049_1	chr11	+	518	4	ISM	ENSMUSG00000018906.15	ENSMUST00000174616.8	2094	15	10550	12439	10534	-12429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCGGACTGGCCACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	54002350	54010049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_54002401_54004962_54005101_54008269_54008510_54009959
ENSMUSG00000018906.15_54010985_54020358_1	chr11	+	515	7	ISM	ENSMUSG00000018906.15	ENSMUST00000019050.12	2230	16	19196	2120	19168	-2120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCTGTGCTTGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	54010984	54020358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291
ENSMUSG00000018906.15_54015499_54022072_1	chr11	+	498	7	ISM	ENSMUSG00000018906.15	ENSMUST00000019050.12	2230	16	23710	406	23682	-406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAAGTTGATTGACGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	54015498	54022072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
ENSMUSG00000018906.15_54015811_54022177_1	chr11	+	509	6	ISM	ENSMUSG00000018906.15	ENSMUST00000019050.12	2230	16	24022	301	23994	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGGTCATTGGAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	54015810	54022177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
ENSMUSG00000018920.12_70345913_70350486_1	chr11	-	1271	5	FSM	ENSMUSG00000018920.12	ENSMUST00000019064.9	2699	5	324	1104	324	-1104	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACTACGTATCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	70350486	70345912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70346271_70346480_70346889_70349570_70349654_70349854_70349994_70350203
ENSMUSG00000018921.12_70283709_70285401_1	chr11	-	954	2	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	15441	-4	15441	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTGTGCTGCTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	70285401	70283708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70283849_70284587
ENSMUSG00000018921.12_70283709_70285481_1	chr11	-	1034	2	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	15361	-4	15361	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	690	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTGTGCTGCTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	70285481	70283708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70283849_70284587
ENSMUSG00000018921.12_70283709_70285556_1	chr11	-	1109	2	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	15286	-4	15286	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	968	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTGTGCTGCTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	70285556	70283708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70283849_70284587
ENSMUSG00000018921.12_70285033_70286202_1	chr11	-	1061	2	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	14640	1320	14640	-1320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	852	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGGAAGAAGAAGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	70286202	70285032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70286019_70286127
ENSMUSG00000018921.12_70285093_70286243_1	chr11	-	1042	2	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	14599	1380	14599	-1380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	753	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGGAAGAAGAGGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	70286243	70285092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70286019_70286127
ENSMUSG00000018921.12_70285136_70286518_1	chr11	-	1123	3	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	14324	1423	14324	-1423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTTTGAGGAAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	70286518	70285135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70286019_70286127_70286335_70286485
ENSMUSG00000018921.12_70285288_70287178_1	chr11	-	1061	4	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	13664	1575	13664	-1575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	778	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCACCCCAGCTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	70287178	70285287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70286019_70286127_70286335_70286485_70286542_70287111
ENSMUSG00000018921.12_70285347_70287221_1	chr11	-	1045	4	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	13621	1634	13621	-1634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	850	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCCTCCACCCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	70287221	70285346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70286019_70286127_70286335_70286485_70286542_70287111
ENSMUSG00000018921.12_70285464_70287440_1	chr11	-	1033	5	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	13402	1751	13402	-1751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	752	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCCTGCCACCTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	70287440	70285463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70286019_70286127_70286335_70286485_70286542_70287111_70287264_70287377
ENSMUSG00000018921.12_70285517_70287488_1	chr11	-	1028	5	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	13354	1804	13354	-1804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTTGGAAAGCGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	70287488	70285516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70286019_70286127_70286335_70286485_70286542_70287111_70287264_70287377
ENSMUSG00000018921.12_70285865_70288509_1	chr11	-	1056	9	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	12333	2152	12333	-2152	internal_fragment	FALSE	canonical	NA	NA	NA	NA	850	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGGCCCCATGCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	70288509	70285864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70286019_70286127_70286335_70286485_70286542_70287111_70287264_70287377_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468
ENSMUSG00000018921.12_70285904_70288571_1	chr11	-	1079	9	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	12271	2191	12271	-2191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1003	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCCCCATCTTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	70288571	70285903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70286019_70286127_70286335_70286485_70286542_70287111_70287264_70287377_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468
ENSMUSG00000018921.12_70287194_70292849_1	chr11	-	1036	10	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	7993	3481	7993	-3481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGGAAGCTTTGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	70292849	70287193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70287264_70287377_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742
ENSMUSG00000018921.12_70287378_70296558_1	chr11	-	1115	10	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	4284	3665	4284	-3665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGACCTTGGCTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	70296558	70287377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452
ENSMUSG00000018921.12_70287455_70297147_1	chr11	-	1103	11	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	3695	3742	3695	-3742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGAGCCTCTGGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	70297147	70287454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082
ENSMUSG00000018921.12_70287645_70300605_1	chr11	-	1043	11	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	237	3932	237	-3932	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATTGTCCACGAGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	70300605	70287644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ENSMUSG00000018921.12_70287686_70300665_1	chr11	-	1062	11	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	177	3973	177	-3973	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGGATACTCTAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	70300665	70287685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ENSMUSG00000018921.12_70287744_70300713_1	chr11	-	1052	11	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	129	4031	129	-4031	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTTTGGTGCCCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	70300713	70287743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ENSMUSG00000018921.12_70288276_70300857_1	chr11	-	1090	9	ISM	ENSMUSG00000018921.12	ENSMUST00000019065.10	3435	17	-3	4567	0	-4563	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGATTTTGCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	70300857	70288275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ENSMUSG00000018923.14_70342758_70344066_1	chr11	+	516	3	NNC	ENSMUSG00000018923.14	novel	468	3	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGATGATCCAGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	70342757	70344066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_70342890_70343035_70343165_70343811
ENSMUSG00000018923.14_70342758_70344066_2	chr11	+	518	3	FSM	ENSMUSG00000018923.14	ENST00000575284.5	468	3	-47	-3	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGATGATCCAGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	70342757	70344066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70342890_70343033_70343165_70343811
ENSMUSG00000018923.14_70342758_70344066_3	chr11	+	511	3	NNC	ENSMUSG00000018923.14	novel	468	3	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGATGATCCAGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	70342757	70344066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_70342890_70343033_70343165_70343818
ENSMUSG00000018932.10_60822859_60837597_1	chr11	+	886	8	ISM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	0	6040	0	-6040	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCAGGGCATCCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	60822858	60837597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469
ENSMUSG00000018932.10_60822892_60837597_1	chr11	+	847	8	NNC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	33	-6040	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCAGGGCATCCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	60822891	60837597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835602_60836336_60836389_60837469
ENSMUSG00000018932.10_60823063_60840769_1	chr11	+	783	10	ISM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	204	2868	204	-2868	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTATGAGTCTTGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	60823062	60840769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746
ENSMUSG00000018932.10_60833977_60842647_1	chr11	+	853	9	ISM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	11118	990	11118	-990	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGATCCTGGGAGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	60833976	60842647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ENSMUSG00000018932.10_60835524_60842847_1	chr11	+	786	7	ISM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	12665	790	12665	-790	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTCCCAGCCAGGCCATA	NA	NA	NA	NA	NA	NA	NA	NA	60835523	60842847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ENSMUSG00000018932.10_60837943_60843122_1	chr11	+	791	4	ISM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	15084	515	15084	-515	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGCTGAGGACACACTAT	NA	NA	NA	NA	NA	NA	NA	NA	60837942	60843122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60838015_60840746_60840887_60841983_60842030_60842589
ENSMUSG00000018932.10_60840771_60843234_1	chr11	+	807	3	ISM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	17912	403	17912	-403	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTCAGACAGCCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	60840770	60843234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60840887_60841983_60842030_60842589
ENSMUSG00000018932.10_60840832_60843274_1	chr11	+	786	3	ISM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	17973	363	17973	-363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTCCCTTTGAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	60840831	60843274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60840887_60841983_60842030_60842589
ENSMUSG00000018965.12_33176160_33184112_1	chr5	+	566	2	FSM	ENSMUSG00000018965.12	ENSMUST00000019109.8	1764	2	0	1198	0	-1198	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTTCCTTATCAAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	33176159	33184112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_33176499_33183885
ENSMUSG00000018965.12_33176326_33184325_1	chr5	+	606	2	NNC	ENSMUSG00000018965.12	novel	1764	2	NA	NA	166	-985	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAATTTTTCTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	33176325	33184325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_33176499_33183892
ENSMUSG00000018995.13_96605167_96712179_2	chr7	+	1535	12	FSM	ENSMUSG00000018995.13	ENST00000528850.5	1548	12	26	-13	26	13	multi-exon	FALSE	canonical	NA	NA	NA	NA	3676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAGCTAGTGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	96605166	96712179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706779_96711775
ENSMUSG00000018995.13_96605167_96712179_3	chr7	+	1527	12	NNC	ENSMUSG00000018995.13	novel	1548	12	NA	NA	26	13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1888	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAGCTAGTGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	96605166	96712179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652012_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706779_96711775
ENSMUSG00000018995.13_96605167_96712179_4	chr7	+	1529	12	NNC	ENSMUSG00000018995.13	novel	1548	12	NA	NA	26	13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAGCTAGTGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	96605166	96712179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652094_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706779_96711775
ENSMUSG00000018995.13_96605219_96712179_1	chr7	+	1473	12	NNC	ENSMUSG00000018995.13	novel	1548	12	NA	NA	78	13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAGCTAGTGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	96605218	96712179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706769_96711775
ENSMUSG00000018995.13_96605219_96712179_2	chr7	+	1482	12	NNC	ENSMUSG00000018995.13	novel	1548	12	NA	NA	78	13	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAGCTAGTGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	96605218	96712179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706779_96711776
ENSMUSG00000018995.13_96605219_96712179_3	chr7	+	1483	12	FSM	ENSMUSG00000018995.13	ENST00000528850.5	1548	12	78	-13	78	13	multi-exon	FALSE	canonical	NA	NA	NA	NA	2312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAGCTAGTGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	96605218	96712179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706779_96711775
ENSMUSG00000018995.13_96605219_96712179_4	chr7	+	1474	12	NNC	ENSMUSG00000018995.13	novel	1548	12	NA	NA	78	13	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAGCTAGTGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	96605218	96712179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680553_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706779_96711775
ENSMUSG00000018995.13_96605219_96712179_6	chr7	+	1478	12	NNC	ENSMUSG00000018995.13	novel	1548	12	NA	NA	78	13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAGCTAGTGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	96605218	96712179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680757_96680791_96684437_96684505_96689105_96689244_96706654_96706779_96711775
ENSMUSG00000018999.15_34135400_34144662_1	chr6	-	720	8	ISM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	9384	5085	9384	-5085	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAACCTTAATGTACA	NA	NA	NA	NA	NA	NA	NA	NA	34144662	34135399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559
ENSMUSG00000018999.15_34138629_34153905_1	chr6	-	695	7	ISM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	141	8314	141	-8314	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCGTTATTTTATAATGT	NA	NA	NA	NA	NA	NA	NA	NA	34153905	34138628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ENSMUSG00000019039.15_108447217_108449973_1	chr9	+	1614	12	FSM	ENSMUSG00000019039.15	ENSMUST00000019183.14	1746	12	132	0	132	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGTGAGGCGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	108447216	108449973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449385_108449497_108449591_108449661_108449749
ENSMUSG00000019054.14_136982260_136994964_1	chr5	+	695	5	FSM	ENSMUSG00000019054.14	ENSMUST00000111094.8	948	5	131	122	0	-39	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCACCCCTGTAGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	136982259	136994964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_136982445_136991852_136991986_136993946_136994024_136994418_136994525_136994770
ENSMUSG00000019055.16_147994601_147997706_1	chr4	-	761	2	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	23518	391	23476	-391	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACTGTACTGGGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	147997706	147994600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_147995332_147997676
ENSMUSG00000019055.16_147994732_148000287_1	chr4	-	760	3	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	20937	522	20895	-522	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTTTTATCACCAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	148000287	147994731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_147995332_147997676_147997803_148000253
ENSMUSG00000019055.16_147994849_148001791_1	chr4	-	786	4	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	19433	639	19391	-639	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGAAGGGCTAGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	148001791	147994848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761
ENSMUSG00000019055.16_147995029_148003281_1	chr4	-	792	6	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	17943	819	17901	-819	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGGGCACCCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	148003281	147995028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236
ENSMUSG00000019055.16_147995151_148004671_1	chr4	-	785	7	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	16553	941	16511	-941	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATCTCATCGTTGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	148004671	147995150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625
ENSMUSG00000019055.16_147995223_148004722_1	chr4	-	764	7	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	16502	1013	16460	-1013	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAAGGGCACGCGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	148004722	147995222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625
ENSMUSG00000019055.16_147995284_148004767_1	chr4	-	748	7	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	16457	1074	16415	-1074	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAAGGGCTGGGCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	148004767	147995283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625
ENSMUSG00000019055.16_147997711_148005563_1	chr4	-	766	7	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	15661	3501	15619	-3501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGCCCTGAACAGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	148005563	147997710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463
ENSMUSG00000019055.16_148000254_148007618_1	chr4	-	843	8	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	13606	6044	13564	-6044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTCTGCCCGGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	148007618	148000253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580
ENSMUSG00000019055.16_148001828_148010025_1	chr4	-	766	8	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	11199	7618	11157	-7618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCTGTGATGAGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	148010025	148001827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973
ENSMUSG00000019055.16_148003329_148010705_1	chr4	-	751	7	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	10519	9119	10477	8745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGCACACCTTTGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	148010705	148003328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603
ENSMUSG00000019055.16_148004625_148011577_1	chr4	-	828	7	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	9647	10415	9605	7449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGGGGCTTGGGGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	148011577	148004624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479
ENSMUSG00000019055.16_148004744_148012968_1	chr4	-	763	8	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	8256	10534	8214	7330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAACATCTACCTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	148012968	148004743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914
ENSMUSG00000019055.16_148005464_148014109_1	chr4	-	862	8	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	7115	11254	7073	6610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATCCAGTGCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	148014109	148005463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996
ENSMUSG00000019055.16_148005914_148015656_1	chr4	-	755	8	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	5568	11704	5526	6160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGATGTGGCTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	148015656	148005913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578
ENSMUSG00000019055.16_148007658_148016128_1	chr4	-	763	8	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	5096	13448	5054	4416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTGAGTACCAGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	148016128	148007657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083
ENSMUSG00000019055.16_148010067_148017218_1	chr4	-	748	8	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	4006	15857	3964	2007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGCCCACACCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	148017218	148010066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083_148016221_148017187
ENSMUSG00000019055.16_148010672_148021165_1	chr4	-	809	8	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	59	16462	17	1402	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGGACCTTCGAGACG	NA	NA	NA	NA	NA	NA	NA	NA	148021165	148010671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083_148016221_148017187_148017280_148021058
ENSMUSG00000019066.14_21819473_21826277_1	chr9	-	2739	3	ISM	ENSMUSG00000019066.14	ENSMUST00000122211.8	3886	5	3158	667	3136	465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAACTGAATAATGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	21826277	21819472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21821968_21825940_21826066_21826158
ENSMUSG00000019066.14_21819713_21827190_1	chr9	-	2689	4	ISM	ENSMUSG00000019066.14	ENSMUST00000122211.8	3886	5	2245	907	2223	225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACTCTGAACACCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	21827190	21819712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000
ENSMUSG00000019066.14_21819781_21827239_1	chr9	-	2670	4	ISM	ENSMUSG00000019066.14	ENSMUST00000122211.8	3886	5	2196	975	2174	157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATCGCGTCTGACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	21827239	21819780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000
ENSMUSG00000019066.14_21819938_21829385_1	chr9	-	2581	5	FSM	ENSMUSG00000019066.14	ENSMUST00000115351.10	3835	5	103	1151	28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGTTTGAGGCTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	21829385	21819937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827240_21829317
ENSMUSG00000019066.14_21819938_21829488_1	chr9	-	2684	5	FSM	ENSMUSG00000019066.14	ENSMUST00000115351.10	3835	5	0	1151	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGTTTGAGGCTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	21829488	21819937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827240_21829317
ENSMUSG00000019080.9_76585665_76586930_1	chr15	+	973	2	ISM	ENSMUSG00000019080.9	ENSMUST00000019224.9	2246	5	0	1509	0	-1509	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGACCTGCTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	76585664	76586930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76586551_76586843
ENSMUSG00000019080.9_76585987_76587327_1	chr15	+	891	4	ISM	ENSMUSG00000019080.9	ENSMUST00000019224.9	2246	5	322	1112	322	-1112	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCACATTCACTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	76585986	76587327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76586551_76586843_76586992_76587078_76587204_76587273
ENSMUSG00000019080.9_76586418_76587845_1	chr15	+	899	5	FSM	ENSMUSG00000019080.9	ENSMUST00000019224.9	2246	5	753	594	753	-594	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGGCCTTGGTGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	76586417	76587845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76586551_76586843_76586992_76587078_76587204_76587273_76587384_76587462
ENSMUSG00000019080.9_76586920_76588050_1	chr15	+	895	4	ISM	ENSMUSG00000019080.9	ENSMUST00000019224.9	2246	5	1255	389	1255	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGCATGGACTCGCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	76586919	76588050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76586992_76587078_76587204_76587273_76587384_76587462
ENSMUSG00000019087.14_73340839_73344248_1	chrX	+	356	4	ISM	ENSMUSG00000019087.14	ENSMUST00000114171.10	2157	10	70	4047	70	-4047	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGACCACCTACCTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	73340838	73344248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183
ENSMUSG00000019087.14_73341323_73345567_1	chrX	+	369	5	ISM	ENSMUSG00000019087.14	ENSMUST00000114171.10	2157	10	554	2728	554	-2728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTCAAGTCTGAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	73341322	73345567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541
ENSMUSG00000019087.14_73344182_73345980_1	chrX	+	336	4	ISM	ENSMUSG00000019087.14	ENSMUST00000114171.10	2157	10	3413	2315	3413	-2315	internal_fragment	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCATGGTGGCTGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	73344181	73345980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73344378_73344929_73344971_73345541_73345628_73345967
ENSMUSG00000019087.14_73344928_73346875_1	chrX	+	416	4	ISM	ENSMUSG00000019087.14	ENSMUST00000114171.10	2157	10	4159	1420	4159	-1420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTCTGTTGGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	73344927	73346875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73344971_73345541_73345628_73345967_73346207_73346827
ENSMUSG00000019087.14_73346159_73347458_1	chrX	+	381	4	ISM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	5456	869	5390	-837	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTCTCCGGGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	73346158	73347458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73346207_73346827_73346876_73346963_73347193_73347402
ENSMUSG00000019088.15_73316823_73317588_1	chrX	-	680	2	ISM	ENSMUSG00000019088.15	ENSMUST00000239458.2	1625	8	7754	0	7616	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTATGCTTAATTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	73317588	73316822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73317298_73317383
ENSMUSG00000019088.15_73317217_73320309_1	chrX	-	680	6	ISM	ENSMUSG00000019088.15	ENSMUST00000239458.2	1625	8	5033	394	4895	-292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTCTACTGCTGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	73320309	73317216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73317298_73317383_73317633_73317711_73317825_73317973_73318075_73320084_73320163_73320251
ENSMUSG00000019088.15_73317428_73320744_1	chrX	-	686	6	ISM	ENSMUSG00000019088.15	ENSMUST00000239458.2	1625	8	4598	605	4460	-503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCTTTGACTTTCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	73320744	73317427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73317633_73317711_73317825_73317973_73318075_73320084_73320163_73320251_73320341_73320644
ENSMUSG00000019088.15_73317579_73320860_1	chrX	-	651	6	ISM	ENSMUSG00000019088.15	ENSMUST00000239458.2	1625	8	4482	756	4344	-654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTGAAAAGCCTGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	73320860	73317578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73317633_73317711_73317825_73317973_73318075_73320084_73320163_73320251_73320341_73320644
ENSMUSG00000019088.15_73317777_73325204_1	chrX	-	698	6	ISM	ENSMUSG00000019088.15	ENSMUST00000239458.2	1625	8	138	954	0	-852	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAAGGAGCTGAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	73325204	73317776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73317825_73317973_73318075_73320084_73320163_73320251_73320341_73320644_73320949_73325126
ENSMUSG00000019102.11_61099447_61109247_1	chr11	+	1711	11	NNC	ENSMUSG00000019102.11	novel	1721	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATGCAATGCTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	61099446	61109247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_61099608_61103052_61103220_61104276_61104509_61105010_61105097_61105375_61105585_61106315_61106424_61107104_61107247_61107906_61108074_61108488_61108589_61108816_61108948_61109039
ENSMUSG00000019102.11_61099447_61109247_2	chr11	+	1710	11	NNC	ENSMUSG00000019102.11	novel	1721	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	938	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATGCAATGCTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	61099446	61109247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_61099608_61103052_61103220_61104276_61104509_61105010_61105097_61105375_61105574_61106315_61106434_61107104_61107247_61107906_61108074_61108488_61108589_61108816_61108948_61109039
ENSMUSG00000019102.11_61099447_61109247_3	chr11	+	1714	11	NNC	ENSMUSG00000019102.11	novel	1721	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATGCAATGCTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	61099446	61109247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_61099608_61103052_61103220_61104276_61104509_61105010_61105097_61105375_61105585_61106315_61106434_61107104_61107247_61107906_61108074_61108488_61108589_61108823_61108948_61109039
ENSMUSG00000019102.11_61099447_61109247_4	chr11	+	1712	11	NNC	ENSMUSG00000019102.11	novel	1721	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATGCAATGCTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	61099446	61109247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_61099608_61103052_61103220_61104276_61104509_61105010_61105097_61105375_61105585_61106315_61106434_61107104_61107247_61107906_61108074_61108497_61108589_61108816_61108948_61109039
ENSMUSG00000019102.11_61099571_61107932_1	chr11	+	1149	8	ISM	ENSMUSG00000019102.11	ENSMUST00000019246.4	1729	11	0	1315	0	-1315	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGTCCCCGGTGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	61099570	61107932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_61099740_61103052_61103220_61104276_61104509_61105010_61105097_61105375_61105585_61106315_61106434_61107104_61107247_61107906
ENSMUSG00000019102.11_61099571_61107975_1	chr11	+	1192	8	ISM	ENSMUSG00000019102.11	ENSMUST00000019246.4	1729	11	0	1272	0	-1272	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCATTGTGTGTGTTCGA	NA	NA	NA	NA	NA	NA	NA	NA	61099570	61107975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_61099740_61103052_61103220_61104276_61104509_61105010_61105097_61105375_61105585_61106315_61106434_61107104_61107247_61107906
ENSMUSG00000019124.11_54483431_54489113_1	chr6	-	2997	2	ISM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	54361	556	54361	-556	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACAAAATTACTGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	54489113	54483430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_54486348_54489033
ENSMUSG00000019124.11_54483474_54489187_1	chr6	-	3028	2	ISM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	54287	599	54287	-599	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTACTCTTAGATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	54489187	54483473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_54486348_54489033
ENSMUSG00000019124.11_54483596_54497838_1	chr6	-	3087	3	ISM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	45636	721	45636	-721	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGCTAAGCATCTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	54497838	54483595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_54486348_54489033_54489215_54497684
ENSMUSG00000019124.11_54483672_54497838_1	chr6	-	3011	3	ISM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	45636	797	45636	-797	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGCAGACACCCGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	54497838	54483671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_54486348_54489033_54489215_54497684
ENSMUSG00000019124.11_54484000_54502593_1	chr6	-	2990	5	ISM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	40881	1125	40881	-1125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTTGTTTTAAAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	54502593	54483999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493
ENSMUSG00000019124.11_54484059_54502643_1	chr6	-	2981	5	ISM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	40831	1184	40831	-1184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTTAGCCAAACTAACAG	NA	NA	NA	NA	NA	NA	NA	NA	54502643	54484058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493
ENSMUSG00000019124.11_54484246_54511537_1	chr6	-	2987	6	ISM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	31937	1371	31937	-1371	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGGAGCATTGGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	54511537	54484245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493_54502697_54511397
ENSMUSG00000019124.11_54484304_54511579_1	chr6	-	2971	6	ISM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	31895	1429	31895	-1429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTGGTTGTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	54511579	54484303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493_54502697_54511397
ENSMUSG00000019124.11_54484524_54543309_1	chr6	-	2996	8	FSM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	165	1649	165	-1649	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGGAAGGTGGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	54543309	54484523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493_54502697_54511397_54511580_54525208_54525369_54543224
ENSMUSG00000019124.11_54484639_54543474_1	chr6	-	3046	8	FSM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	0	1764	0	-1764	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGGGACACAGGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	54543474	54484638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493_54502697_54511397_54511580_54525208_54525369_54543224
ENSMUSG00000019132.12_24986003_24996791_1	chr13	+	748	5	FSM	ENSMUSG00000019132.12	ENST00000378102.3	754	5	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTTCTTTTCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	24986002	24996791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_24986144_24988764_24988942_24989844_24989968_24993868_24994004_24996619
ENSMUSG00000019143.16_36916284_36924506_1	chr18	+	2004	13	FSM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	223	1109	0	-241	multi-exon	FALSE	canonical	NA	NA	NA	NA	2330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCACCATTGAAATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	36916283	36924506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ENSMUSG00000019143.16_36916430_36922470_1	chr18	+	940	9	ISM	ENSMUSG00000019143.16	ENST00000508522.5	1523	12	7	1772	7	-1772	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGAAGCAGTACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	36916429	36922470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36916548_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419
ENSMUSG00000019143.16_36916482_36922520_1	chr18	+	938	9	ISM	ENSMUSG00000019143.16	ENST00000508522.5	1523	12	59	1722	59	-1722	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGTGGGTAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	36916481	36922520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36916548_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419
ENSMUSG00000019143.16_36916531_36922572_1	chr18	+	941	9	ISM	ENSMUSG00000019143.16	ENST00000508522.5	1523	12	108	1670	108	-1670	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTGATCCCAAGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	36916530	36922572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36916548_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419
ENSMUSG00000019143.16_36918615_36924747_1	chr18	+	1984	12	ISM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	2554	868	2192	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGGTCTTTTGAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	36918614	36924747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ENSMUSG00000019143.16_36919020_36923215_1	chr18	+	945	9	ISM	ENSMUSG00000019143.16	ENST00000508522.5	1523	12	2597	1027	2597	-1027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCAAGTGTTTGTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	36919019	36923215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186
ENSMUSG00000019143.16_36919164_36923303_1	chr18	+	1011	8	ISM	ENSMUSG00000019143.16	ENST00000508522.5	1523	12	2741	939	2741	-939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGGTGCTGACGTCT	NA	NA	NA	NA	NA	NA	NA	NA	36919163	36923303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186
ENSMUSG00000019143.16_36919186_36924978_1	chr18	+	1992	10	ISM	ENSMUSG00000019143.16	ENST00000508522.5	1523	12	2763	-736	2763	195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTCCAGTAACTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	36919185	36924978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ENSMUSG00000019143.16_36920604_36923671_1	chr18	+	1016	8	ISM	ENSMUSG00000019143.16	ENST00000508522.5	1523	12	4181	571	4181	-571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGGCGCTGGTATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	36920603	36923671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521
ENSMUSG00000019143.16_36920627_36925151_1	chr18	+	2019	9	ISM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	4566	464	4204	368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTTTGAATATATACT	NA	NA	NA	NA	NA	NA	NA	NA	36920626	36925151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ENSMUSG00000019143.16_36921217_36924242_1	chr18	+	950	7	ISM	ENSMUSG00000019143.16	ENST00000508522.5	1523	12	4794	0	4794	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGACTTTGCAACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	36921216	36924242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ENSMUSG00000019143.16_36922209_36925450_1	chr18	+	1964	5	ISM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	6148	165	5786	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGTGGCACAGGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	36922208	36925450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ENSMUSG00000019143.16_36922247_36925615_1	chr18	+	2091	5	ISM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	6186	0	5824	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGACCCTTTGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	36922246	36925615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ENSMUSG00000019173.12_100605837_100609351_1	chr11	-	1464	4	ISM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	19690	2	19690	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAAGATTGTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	100609351	100605836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256
ENSMUSG00000019173.12_100605979_100609390_1	chr11	-	1361	4	ISM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	19651	144	19651	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGAGAGGATGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	100609390	100605978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256
ENSMUSG00000019173.12_100606084_100610837_1	chr11	-	1371	5	ISM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	18204	249	18204	-247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCGTCCTTCTCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	100610837	100606083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740
ENSMUSG00000019173.12_100606150_100610900_1	chr11	-	1368	5	ISM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	18141	315	18141	-313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCACCATGTAACCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	100610900	100606149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740
ENSMUSG00000019173.12_100606311_100629002_1	chr11	-	1400	6	FSM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	39	476	39	-474	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCATGGCCCAGGATCCC	NA	NA	NA	NA	NA	NA	NA	NA	100629002	100606310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
ENSMUSG00000019179.11_135807334_135816505_1	chr5	+	922	6	ISM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	0	2740	0	-2558	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2837	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGCCTTCTTAAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	135807333	135816505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394
ENSMUSG00000019179.11_135807576_135814892_1	chr5	+	274	3	ISM	ENSMUSG00000019179.11	ENST00000443006.5	920	8	57	4171	57	-4171	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACCAGGGGCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	135807575	135814892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135807656_135813037_135813122_135814782
ENSMUSG00000019179.11_135807576_135818631_1	chr5	+	899	8	ISM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	242	614	57	-432	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4999	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTATCCAGGGCGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	135807575	135818631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479
ENSMUSG00000019179.11_135812240_135819017_1	chr5	+	825	8	ISM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	4906	228	4721	-46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCCATCAAGAAAGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	135812239	135819017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ENSMUSG00000019179.11_135812241_135818997_1	chr5	+	804	8	ISM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	4907	248	4722	-66	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTATCCCTGAGCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	135812240	135818997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ENSMUSG00000019179.11_135814779_135819245_1	chr5	+	885	6	ISM	ENSMUSG00000019179.11	ENST00000443006.5	920	8	7260	-182	7260	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5630	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTGTAGATTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	135814778	135819245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ENSMUSG00000019188.17_152511408_152546958_1	chr2	+	1749	12	NNC	ENSMUSG00000019188.17	novel	1743	13	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGCTCTCAGCAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	152511407	152546958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152537360_152537505_152542102_152542189_152545914_152546115_152546541
ENSMUSG00000019188.17_152511408_152546958_2	chr2	+	1738	13	NNC	ENSMUSG00000019188.17	novel	1743	13	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGCTCTCAGCAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	152511407	152546958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152545914_152546115_152546548
ENSMUSG00000019188.17_152511408_152546958_3	chr2	+	1738	13	NNC	ENSMUSG00000019188.17	novel	1743	13	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGCTCTCAGCAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	152511407	152546958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152545921_152546115_152546541
ENSMUSG00000019188.17_152511454_152547446_1	chr2	+	1987	12	FSM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	73	3144	46	490	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGTGGAAAAACTGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	152511453	152547446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
ENSMUSG00000019188.17_152511454_152547498_1	chr2	+	2039	12	FSM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	73	3092	46	542	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGGTTCAGGGTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	152511453	152547498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
ENSMUSG00000019188.17_152511582_152547575_1	chr2	+	1988	12	FSM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	201	3015	174	619	multi-exon	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAGTGGAGGGAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	152511581	152547575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
ENSMUSG00000019188.17_152519493_152547684_1	chr2	+	1963	11	ISM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	8112	2906	8085	728	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTACAGAGGAGGGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	152519492	152547684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
ENSMUSG00000019188.17_152519541_152547740_1	chr2	+	1971	11	ISM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	8160	2850	8133	784	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAAGCACTGTGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	152519540	152547740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
ENSMUSG00000019188.17_152528092_152547945_1	chr2	+	1999	9	ISM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	16711	2645	16684	989	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGCCCCTCTGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	152528091	152547945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
ENSMUSG00000019188.17_152537481_152548414_1	chr2	+	1983	3	ISM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	26100	2176	26073	1458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCAGGCTCACCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	152537480	152548414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152537505_152542102_152542189_152546541
ENSMUSG00000019188.17_152542164_152548531_1	chr2	+	2015	2	ISM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	30783	2059	30756	1575	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTTAAGACCATCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	152542163	152548531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152542189_152546541
ENSMUSG00000019189.14_44409810_44456145_1	chr11	+	3349	11	FSM	ENSMUSG00000019189.14	ENSMUST00000019333.10	3570	11	19	202	19	-202	multi-exon	TRUE	canonical	NA	NA	NA	NA	2617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGATGTAATTTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	44409809	44456145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ENSMUSG00000019189.14_44409810_44456145_2	chr11	+	3344	11	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	19	-202	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGATGTAATTTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	44409809	44456145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439595_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ENSMUSG00000019189.14_44415753_44456347_1	chr11	+	3261	10	ISM	ENSMUSG00000019189.14	ENSMUST00000019333.10	3570	11	5962	0	5484	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGTATTCCTGTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	44415752	44456347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ENSMUSG00000019189.14_44452507_44454756_1	chr11	+	177	2	ISM	ENSMUSG00000019189.14	ENST00000616872.1	1771	9	30405	293	30405	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCTGTGATCACACCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	44452506	44454756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_44452649_44454721
ENSMUSG00000019189.14_44452565_44454800_1	chr11	+	163	2	ISM	ENSMUSG00000019189.14	ENST00000616872.1	1771	9	30463	249	30463	-249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGAAATGGCTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	44452564	44454800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_44452649_44454721
ENSMUSG00000019194.16_30816468_30817272_1	chr7	-	308	3	ISM	ENSMUSG00000019194.16	ENST00000595652.5	685	5	7372	184	7372	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGATCAGCCCTTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	30817272	30816467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30816562_30816648_30816721_30817130
ENSMUSG00000019194.16_30816468_30817273_1	chr7	-	304	3	NNC	ENSMUSG00000019194.16	novel	685	5	NA	NA	7371	-184	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGATCAGCCCTTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	30817273	30816467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_30816562_30816648_30816716_30817130
ENSMUSG00000019194.16_30817131_30824603_1	chr7	-	294	3	ISM	ENSMUSG00000019194.16	ENST00000595652.5	685	5	41	847	41	-847	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGGGCTGGTAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	30824603	30817130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30817273_30822330_30822359_30824479
ENSMUSG00000019194.16_30820742_30824603_1	chr7	-	501	3	FSM	ENSMUSG00000019194.16	ENST00000640135.1	547	3	46	0	41	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCGGGACGTCACCACG	NA	NA	NA	NA	NA	NA	NA	NA	30824603	30820741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30820814_30822266_30822572_30824479
ENSMUSG00000019210.11_120772215_120785397_1	chr6	-	995	7	ISM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	14357	10	9965	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTGGATTTAGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	120785397	120772214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322
ENSMUSG00000019210.11_120772374_120795360_1	chr6	-	937	8	ISM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	4394	169	2	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCTGTCCCTGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	120795360	120772373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294
ENSMUSG00000019210.11_120772528_120799646_1	chr6	-	881	9	FSM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	108	323	108	-306	multi-exon	FALSE	canonical	NA	NA	NA	NA	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCCACTTGGTGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	120799646	120772527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294_120795361_120799548
ENSMUSG00000019210.11_120772528_120799754_1	chr6	-	989	9	FSM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	0	323	0	-306	multi-exon	FALSE	canonical	NA	NA	NA	NA	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCCACTTGGTGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	120799754	120772527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294_120795361_120799548
ENSMUSG00000019210.11_120774834_120784613_1	chr6	-	323	4	ISM	ENSMUSG00000019210.11	ENST00000399796.6	1001	7	10749	2612	10749	-2612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGACTCTGGTTACGTG	NA	NA	NA	NA	NA	NA	NA	NA	120784613	120774833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120774926_120778003_120778099_120780268_120780338_120784546
ENSMUSG00000019230.15_138769545_138770167_1	chr1	-	291	2	FSM	ENSMUSG00000019230.15	ENST00000367388.4	323	2	32	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGACCAGTCCGGGCGCG	NA	NA	NA	NA	NA	NA	NA	NA	138770167	138769544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_138769665_138769996
ENSMUSG00000019254.17_4484587_4489415_1	chr7	-	1923	16	ISM	ENSMUSG00000019254.17	ENST00000263433.8	2970	21	15273	52	11132	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGAGGGGGAGAAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	4489415	4484586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485912_4486088_4486188_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356
ENSMUSG00000019254.17_4484725_4489573_1	chr7	-	1865	17	ISM	ENSMUSG00000019254.17	ENST00000263433.8	2970	21	15115	190	10974	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCCTCCTCCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	4489573	4484724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485912_4486088_4486188_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509
ENSMUSG00000019254.17_4484792_4489611_1	chr7	-	1836	17	ISM	ENSMUSG00000019254.17	ENST00000263433.8	2970	21	15077	257	10936	169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGATCAGTATCCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	4489611	4484791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485912_4486088_4486188_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509
ENSMUSG00000019254.17_4484801_4489627_1	chr7	-	1840	17	ISM	ENSMUSG00000019254.17	ENST00000435544.6	2119	20	10920	-160	10920	160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAGACACAAAGATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	4489627	4484800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485912_4486088_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509
ENSMUSG00000019254.17_4484849_4489734_1	chr7	-	1902	17	ISM	ENSMUSG00000019254.17	ENST00000263433.8	2970	21	14954	314	10813	112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGTGGACAGGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	4489734	4484848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485912_4486088_4486188_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509
ENSMUSG00000019254.17_4485006_4500240_1	chr7	-	1850	19	ISM	ENSMUSG00000019254.17	ENST00000263433.8	2970	21	4448	471	307	-45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACATGAGTGACAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	4500240	4485005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485912_4486088_4486188_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215
ENSMUSG00000019254.17_4485054_4500300_1	chr7	-	1862	19	ISM	ENSMUSG00000019254.17	ENST00000263433.8	2970	21	4388	519	247	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATATTTATACTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	4500300	4485053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485912_4486088_4486188_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215
ENSMUSG00000019254.17_4485143_4500451_1	chr7	-	1844	20	ISM	ENSMUSG00000019254.17	ENST00000263433.8	2970	21	4237	608	96	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGCTGACAACCAGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	4500451	4485142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485912_4486088_4486188_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414
ENSMUSG00000019254.17_4485583_4504360_1	chr7	-	1917	18	ISM	ENSMUSG00000019254.17	ENST00000263433.8	2970	21	328	1048	319	-622	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAAGTGTGTTGGGGATA	NA	NA	NA	NA	NA	NA	NA	NA	4504360	4485582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4485688_4485789_4485912_4486088_4486188_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ENSMUSG00000019254.17_4485856_4504528_1	chr7	-	1911	17	NIC	ENSMUSG00000019254.17	novel	2970	21	NA	NA	151	-895	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGAGAGACCTCGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	4504528	4485855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_4485912_4486088_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ENSMUSG00000019254.17_4486088_4504528_1	chr7	-	1856	16	ISM	ENSMUSG00000019254.17	ENSMUST00000013886.9	2983	22	151	1569	151	-1127	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGGGTGGCGGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	4504528	4486087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ENSMUSG00000019254.17_4486340_4504663_1	chr7	-	1894	15	ISM	ENSMUSG00000019254.17	ENST00000263433.8	2970	21	25	1805	16	-1379	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTCTGCTTTCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	4504663	4486339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ENSMUSG00000019278.6_123912981_123928227_1	chr8	+	1912	11	FSM	ENSMUSG00000019278.6	ENSMUST00000019422.6	2236	11	0	324	0	-324	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTACTCATGTGCACACA	NA	NA	NA	NA	NA	NA	NA	NA	123912980	123928227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123913181_123920771_123920926_123925452_123925586_123925783_123925917_123926032_123926184_123926360_123926431_123926679_123926857_123926945_123927031_123927105_123927182_123927376_123927513_123927630
ENSMUSG00000019295.9_33810841_33812105_1	chr5	-	1167	2	ISM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	3655	281	725	-281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCACTTACATTTAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	33812105	33810840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33811959_33812056
ENSMUSG00000019295.9_33810891_33812158_1	chr5	-	1170	2	ISM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	3602	331	672	-331	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACAAAGTGTAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	33812158	33810890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33811959_33812056
ENSMUSG00000019295.9_33810939_33812213_1	chr5	-	1177	2	ISM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	3547	379	617	-379	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGTACAGATGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	33812213	33810938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33811959_33812056
ENSMUSG00000019295.9_33811097_33812830_1	chr5	-	1186	3	ISM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	2930	537	0	369	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAGGACCAGAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	33812830	33811096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33811959_33812056_33812217_33812666
ENSMUSG00000019295.9_33811193_33812882_1	chr5	-	1142	3	ISM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	2878	633	-52	273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGGGTCCACAATGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	33812882	33811192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33811959_33812056_33812217_33812666
ENSMUSG00000019295.9_33811301_33813001_1	chr5	-	1153	3	ISM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	2759	741	-171	165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTCTAGGGTATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	33813001	33811300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33811959_33812056_33812217_33812666
ENSMUSG00000019295.9_33811709_33815291_1	chr5	-	1210	4	FSM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	469	1149	105	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCACAGTATGTTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	33815291	33811708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_33811959_33812056_33812217_33812666_33813142_33814966
ENSMUSG00000019295.9_33811709_33815291_2	chr5	-	1050	3	FSM	ENSMUSG00000019295.9	ENST00000303277.6	1155	3	105	0	105	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCACAGTATGTTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	33815291	33811708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_33811959_33812666_33813142_33814966
ENSMUSG00000019295.9_33812058_33815492_1	chr5	-	1160	3	ISM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	268	1498	-96	-349	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGGGGCTGGCCCGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	33815492	33812057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33812217_33812666_33813142_33814966
ENSMUSG00000019295.9_33812177_33815602_1	chr5	-	1151	3	ISM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	158	1617	158	-468	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGCCCCAATCCGAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	33815602	33812176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33812217_33812666_33813142_33814966
ENSMUSG00000019295.9_33812688_33815760_1	chr5	-	1248	2	ISM	ENSMUSG00000019295.9	ENST00000303277.6	1155	3	-364	979	0	-979	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAGCCCTTTGATATTC	NA	NA	NA	NA	NA	NA	NA	NA	33815760	33812687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33813142_33814966
ENSMUSG00000019297.10_55986806_55987542_1	chr14	+	188	2	ISM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	3656	5415	3656	-5415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTCATTGATTACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	55986805	55987542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55986900_55987448
ENSMUSG00000019297.10_55987449_55988552_1	chr14	+	185	2	ISM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	4299	4405	4299	-4405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGCAGGTGCTGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	55987448	55988552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55987591_55988509
ENSMUSG00000019297.10_55988618_55989633_1	chr14	+	204	2	ISM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	5468	3324	5468	-3324	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGCAGCTGTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	55988617	55989633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55988703_55989514
ENSMUSG00000019297.10_55989558_55990091_1	chr14	+	196	2	ISM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	6408	2866	6408	-2866	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGGGGCTGTGCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	55989557	55990091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55989656_55989993
ENSMUSG00000019297.10_55990756_55991211_1	chr14	+	181	2	ISM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	7606	1746	7606	-1746	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCAAGCGGAGGCGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	55990755	55991211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55990823_55991097
ENSMUSG00000019303.15_100982649_100986084_1	chr11	-	1197	7	ISM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	178	0	178	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCTTTGCCTTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	100986084	100982648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983
ENSMUSG00000019312.11_98341683_98344662_1	chr11	+	978	9	ISM	ENSMUSG00000019312.11	ENST00000394204.1	1523	13	89	1169	89	-1169	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGCGCCTATCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	98341682	98344662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618
ENSMUSG00000019312.11_98341929_98344914_1	chr11	+	991	9	ISM	ENSMUSG00000019312.11	ENST00000394204.1	1523	13	335	917	335	-917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGCCTTCACCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	98341928	98344914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797
ENSMUSG00000019312.11_98342132_98345445_1	chr11	+	1013	10	ISM	ENSMUSG00000019312.11	ENST00000394204.1	1523	13	538	386	538	-386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTTGTCCTGTCCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98342131	98345445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98344915_98345046_98345108_98345408
ENSMUSG00000019312.11_98342420_98345831_1	chr11	+	1061	10	ISM	ENSMUSG00000019312.11	ENST00000394204.1	1523	13	826	0	826	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCGCACAAGCTACTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	98342419	98345831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98344915_98345046_98345108_98345408_98345503_98345684
ENSMUSG00000019359.15_99773792_99777554_1	chrX	+	625	8	ISM	ENSMUSG00000019359.15	ENST00000374382.4	1955	15	51	4621	0	-4621	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGATGCCGCTGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	99773791	99777554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99773802_99775677_99775792_99776001_99776106_99776399_99776494_99776677_99776738_99776979_99777079_99777251_99777346_99777504
ENSMUSG00000019359.15_99776068_99778031_1	chrX	+	679	8	ISM	ENSMUSG00000019359.15	ENST00000374382.4	1955	15	2327	4144	2276	-4144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTCCAGAGCGAATC	NA	NA	NA	NA	NA	NA	NA	NA	99776067	99778031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99776106_99776399_99776494_99776677_99776738_99776979_99777079_99777251_99777346_99777504_99777654_99777775_99777859_99777969
ENSMUSG00000019359.15_99776713_99779904_1	chrX	+	649	7	ISM	ENSMUSG00000019359.15	ENST00000374382.4	1955	15	2972	2271	2921	-2271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCTGAGAATCAGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	99776712	99779904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99776738_99776979_99777079_99777251_99777346_99777504_99777654_99777775_99777859_99777969_99778121_99779856
ENSMUSG00000019359.15_99777539_99780388_1	chrX	+	665	5	ISM	ENSMUSG00000019359.15	ENST00000374382.4	1955	15	3798	1787	3747	-1787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCCCCAGTTTCTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	99777538	99780388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99777654_99777775_99777859_99777969_99778121_99779856_99780079_99780294
ENSMUSG00000019359.15_99778059_99781413_1	chrX	+	638	5	ISM	ENSMUSG00000019359.15	ENST00000374382.4	1955	15	4318	762	4267	-762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGTATCTTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	99778058	99781413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99778121_99779856_99780079_99780294_99780444_99781070_99781219_99781356
ENSMUSG00000019359.15_99779946_99782002_1	chrX	+	680	5	NIC	ENSMUSG00000019359.15	novel	2495	16	NA	NA	6154	-173	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCTAACAGAAGATTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	99779945	99782002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chrX_+_99780079_99780294_99780444_99781070_99781219_99781356_99781440_99781835
ENSMUSG00000019359.15_99780294_99782175_1	chrX	+	721	4	NIC	ENSMUSG00000019359.15	novel	1955	15	NA	NA	6502	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATAATGCATTAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	99780293	99782175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chrX_+_99780444_99781070_99781219_99781356_99781440_99781835
ENSMUSG00000019359.15_99781071_99782175_1	chrX	+	575	3	ISM	ENSMUSG00000019359.15	ENST00000374382.4	1955	15	7330	0	7279	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATAATGCATTAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	99781070	99782175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99781219_99781356_99781444_99781835
ENSMUSG00000019362.9_84972867_84976348_1	chr8	-	610	3	NNC	ENSMUSG00000019362.9	novel	616	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGTGTGCTGTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	84976348	84972866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_84973323_84976102_84976153_84976244
ENSMUSG00000019370.11_16650341_16651090_1	chr7	-	652	2	ISM	ENSMUSG00000019370.11	ENST00000594523.5	534	6	6744	-506	6744	498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGGGAGTTGAGGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	16651090	16650340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_16650902_16650999
ENSMUSG00000019370.11_16650677_16653590_1	chr7	-	643	5	ISM	ENSMUSG00000019370.11	ENSMUST00000019514.10	2290	6	4449	1373	4244	162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGGCCTTCCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	16653590	16650676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16653559
ENSMUSG00000019370.11_16650847_16657829_1	chr7	-	521	5	NNC	ENSMUSG00000019370.11	novel	534	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGATCTCTTCTCGCG	NA	NA	NA	NA	NA	NA	NA	NA	16657829	16650846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651646_16657742
ENSMUSG00000019370.11_16650847_16657829_2	chr7	-	529	5	NNC	ENSMUSG00000019370.11	novel	554	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGATCTCTTCTCGCG	NA	NA	NA	NA	NA	NA	NA	NA	16657829	16650846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16657742
ENSMUSG00000019370.11_16650847_16657829_3	chr7	-	516	5	NNC	ENSMUSG00000019370.11	novel	534	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGATCTCTTCTCGCG	NA	NA	NA	NA	NA	NA	NA	NA	16657829	16650846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651646_16657747
ENSMUSG00000019370.11_16650847_16657829_4	chr7	-	529	6	FSM	ENSMUSG00000019370.11	ENST00000594523.5	534	6	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGATCTCTTCTCGCG	NA	NA	NA	NA	NA	NA	NA	NA	16657829	16650846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651646_16653559_16653591_16657765
ENSMUSG00000019370.11_16650847_16657829_5	chr7	-	524	5	NNC	ENSMUSG00000019370.11	novel	554	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGATCTCTTCTCGCG	NA	NA	NA	NA	NA	NA	NA	NA	16657829	16650846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16657747
ENSMUSG00000019370.11_16651069_16657829_1	chr7	-	382	4	ISM	ENSMUSG00000019370.11	ENST00000598871.5	554	5	40	230	5	-222	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGAGGAAGTGGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	16657829	16651068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_16651136_16651310_16651418_16651509_16651654_16657765
ENSMUSG00000019370.11_16651310_16657829_1	chr7	-	316	3	ISM	ENSMUSG00000019370.11	ENST00000598871.5	554	5	40	471	5	-463	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGTCAGCCCTAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	16657829	16651309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_16651418_16651509_16651654_16657765
ENSMUSG00000019373.12_59708621_59718744_1	chr11	-	984	7	ISM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	11920	0	9104	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1052	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAATGTGTGTTCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	59718744	59708620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671
ENSMUSG00000019373.12_59708779_59720997_1	chr11	-	958	8	ISM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	9667	158	6851	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1014	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTCAGTTTAACATCT	NA	NA	NA	NA	NA	NA	NA	NA	59720997	59708778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972
ENSMUSG00000019373.12_59708847_59721044_1	chr11	-	937	8	ISM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	9620	226	6804	-226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1058	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCAAGTGTGAAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	59721044	59708846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972
ENSMUSG00000019373.12_59708914_59723759_1	chr11	-	941	9	ISM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	6905	293	4089	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCAGGAAACAAGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	59723759	59708913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709
ENSMUSG00000019373.12_59709245_59723970_1	chr11	-	1033	9	ISM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	6694	624	3878	-624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACAGGGTGCTCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	59723970	59709244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857
ENSMUSG00000019373.12_59710842_59718853_1	chr11	-	671	5	ISM	ENSMUSG00000019373.12	ENST00000505334.1	1021	9	8995	0	8995	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGACCAAGAGGTAAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	59718853	59710841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718687
ENSMUSG00000019373.12_59710842_59718853_2	chr11	-	664	5	NNC	ENSMUSG00000019373.12	novel	1021	9	NA	NA	8995	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGACCAAGAGGTAAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	59718853	59710841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_59710938_59712125_59712213_59715100_59715275_59717115_59717257_59718687
ENSMUSG00000019373.12_59710919_59727761_1	chr11	-	909	9	ISM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	2903	2298	87	-77	internal_fragment	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAACCAGAAGGATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	59727761	59710918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716
ENSMUSG00000019373.12_59710921_59721006_1	chr11	-	624	6	ISM	ENSMUSG00000019373.12	ENST00000505334.1	1021	9	6842	79	6842	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATTAACCAGAAGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	59721006	59710920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718687_59718852_59720972
ENSMUSG00000019373.12_59712186_59723759_1	chr11	-	649	6	ISM	ENSMUSG00000019373.12	ENST00000505334.1	1021	9	4089	1344	4089	-1344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCAAGCCGTGTACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	59723759	59712185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59712213_59715100_59715275_59717115_59717257_59718687_59718852_59720972_59721066_59723709
ENSMUSG00000019373.12_59712186_59727848_1	chr11	-	905	8	NNC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	0	-1344	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCAAGCCGTGTACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	59727848	59712185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727721
ENSMUSG00000019373.12_59715140_59727763_1	chr11	-	702	7	NNC	ENSMUSG00000019373.12	novel	1021	9	NA	NA	85	-4298	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGTCTCTTTATAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	59727763	59715139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_59715275_59717115_59717257_59718687_59718852_59720972_59721066_59723709_59723760_59723893_59723971_59727721
ENSMUSG00000019373.12_59715140_59727770_1	chr11	-	714	7	ISM	ENSMUSG00000019373.12	ENST00000505334.1	1021	9	78	4298	78	-4298	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGTCTCTTTATAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	59727770	59715139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59715275_59717115_59717257_59718687_59718852_59720972_59721066_59723709_59723760_59723893_59723971_59727716
ENSMUSG00000019373.12_59715140_59730578_1	chr11	-	925	8	ISM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	86	6519	86	-4298	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGTCTCTTTATAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	59730578	59715139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ENSMUSG00000019373.12_59715140_59730578_2	chr11	-	920	8	NNC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	86	-4298	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGTCTCTTTATAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	59730578	59715139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727721_59727847_59730495
ENSMUSG00000019428.17_70980412_70983693_1	chr8	+	464	3	ISM	ENSMUSG00000019428.17	ENSMUST00000075491.14	1698	9	15	4283	7	-4119	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCACCCGTGTACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	70980411	70983693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70980487_70982040_70982326_70983589
ENSMUSG00000019428.17_70980412_70984275_1	chr8	+	723	5	ISM	ENSMUSG00000019428.17	ENSMUST00000075491.14	1698	9	15	3701	7	-3537	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCCTGGCCAACCGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	70980411	70984275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171
ENSMUSG00000019428.17_70980459_70984337_1	chr8	+	738	5	ISM	ENSMUSG00000019428.17	ENSMUST00000075491.14	1698	9	62	3639	-37	-3475	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCGCCAATTCCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	70980458	70984337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171
ENSMUSG00000019428.17_70980659_70983923_1	chr8	+	571	4	ISM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	163	4054	163	-3889	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAGCTGGCCTGCGTAT	NA	NA	NA	NA	NA	NA	NA	NA	70980658	70983923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834
ENSMUSG00000019428.17_70982039_70983923_1	chr8	+	546	3	ISM	ENSMUSG00000019428.17	ENST00000608443.6	1530	9	1634	3889	1543	-3889	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAGCTGGCCTGCGTAT	NA	NA	NA	NA	NA	NA	NA	NA	70982038	70983923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70982326_70983589_70983760_70983834
ENSMUSG00000019428.17_70982169_70985300_1	chr8	+	711	5	ISM	ENSMUSG00000019428.17	ENST00000608443.6	1530	9	1764	2512	1673	-2512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTGAAGCTGGACCACTA	NA	NA	NA	NA	NA	NA	NA	NA	70982168	70985300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226
ENSMUSG00000019428.17_70982172_70984269_1	chr8	+	511	4	ISM	ENSMUSG00000019428.17	ENST00000608443.6	1530	9	1767	3543	1676	-3543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCGTGGCCCTGGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	70982171	70984269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70982326_70983589_70983760_70983834_70983924_70984171
ENSMUSG00000019428.17_70982217_70985363_1	chr8	+	726	5	ISM	ENSMUSG00000019428.17	ENST00000608443.6	1530	9	1812	2449	1721	-2449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGACAACATCAAGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	70982216	70985363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226
ENSMUSG00000019428.17_70982294_70985399_1	chr8	+	685	5	ISM	ENSMUSG00000019428.17	ENST00000608443.6	1530	9	1889	2413	1798	-2413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCGTTGCAACCATAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	70982293	70985399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226
ENSMUSG00000019428.17_70983624_70987144_1	chr8	+	709	6	ISM	ENSMUSG00000019428.17	ENST00000608443.6	1530	9	3219	668	3128	-668	internal_fragment	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTCTCAAAGCTGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	70983623	70987144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132
ENSMUSG00000019428.17_70983654_70987238_1	chr8	+	773	6	ISM	ENSMUSG00000019428.17	ENST00000608443.6	1530	9	3249	574	3158	-574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTGTCCGGGAAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	70983653	70987238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132
ENSMUSG00000019428.17_70983673_70985333_1	chr8	+	504	4	ISM	ENSMUSG00000019428.17	ENST00000608443.6	1530	9	3268	2479	3177	-2479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCTGTAGCCAGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	70983672	70985333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70983760_70983834_70983924_70984171_70984393_70985226
ENSMUSG00000019428.17_70983744_70987264_1	chr8	+	709	6	ISM	ENSMUSG00000019428.17	ENST00000608443.6	1530	9	3339	548	3248	-548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCCTGGGTGGGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	70983743	70987264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132
ENSMUSG00000019428.17_70984384_70987621_1	chr8	+	497	5	ISM	ENSMUSG00000019428.17	ENST00000608443.6	1530	9	3979	191	3888	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCCAACCTGTGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	70984383	70987621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ENSMUSG00000019428.17_70986767_70987978_1	chr8	+	672	3	ISM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	6271	-1	6271	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	854	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	70986766	70987978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70986845_70987132_70987265_70987516
ENSMUSG00000019432.16_35460722_35472683_1	chr17	+	1734	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTGTTCATGGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	35460721	35472683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35460829_35462088_35462427_35463116_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ENSMUSG00000019432.16_35460722_35472683_2	chr17	+	1731	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTGTTCATGGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	35460721	35472683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35460821_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ENSMUSG00000019432.16_35460722_35472683_3	chr17	+	1733	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTGTTCATGGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	35460721	35472683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463519_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ENSMUSG00000019432.16_35460722_35472683_4	chr17	+	1731	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTGTTCATGGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	35460721	35472683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472190_35472331_35472448
ENSMUSG00000019432.16_35460722_35472683_5	chr17	+	1732	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2048	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTGTTCATGGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	35460721	35472683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465919_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ENSMUSG00000019433.10_84379306_84387816_1	chr8	+	290	2	ISM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	0	3507	0	-3507	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGCAGCCCCACAGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	84379305	84387816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84379367_84387587
ENSMUSG00000019433.10_84387640_84388646_1	chr8	+	333	2	ISM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	8334	2677	8334	-2677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGGAAGACTTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	84387639	84388646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84387910_84388583
ENSMUSG00000019433.10_84387702_84388686_1	chr8	+	311	2	ISM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	8396	2637	8396	-2637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGAGGTGGAAGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	84387701	84388686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84387910_84388583
ENSMUSG00000019433.10_84387787_84388879_1	chr8	+	325	3	ISM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	8481	2444	8481	-2444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGATTGACCACATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	84387786	84388879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84387910_84388583_84388770_84388863
ENSMUSG00000019433.10_84387845_84388995_1	chr8	+	383	3	ISM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	8539	2328	8539	-2328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCCGCACCTTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	84387844	84388995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84387910_84388583_84388770_84388863
ENSMUSG00000019433.10_84387895_84388995_1	chr8	+	333	3	ISM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	8589	2328	8589	-2328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCCGCACCTTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	84387894	84388995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84387910_84388583_84388770_84388863
ENSMUSG00000019433.10_84388921_84390759_1	chr8	+	332	4	ISM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	9615	564	9615	-564	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGCTGGGAAAGGACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84388920	84390759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84389045_84389677_84389791_84390548_84390631_84390746
ENSMUSG00000019433.10_84388986_84390803_1	chr8	+	311	4	ISM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	9680	520	9680	-520	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGATGAGCGGCTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	84388985	84390803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84389045_84389677_84389791_84390548_84390631_84390746
ENSMUSG00000019433.10_84389023_84390870_1	chr8	+	341	4	ISM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	9717	453	9717	-453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGATGCCAAGGTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	84389022	84390870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_84389045_84389677_84389791_84390548_84390631_84390746
ENSMUSG00000019437.18_78069903_78072735_1	chr11	+	2274	4	FSM	ENSMUSG00000019437.18	ENSMUST00000092880.14	2700	4	426	0	315	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTGCTAGAGGTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	78069902	78072735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_78070048_78070195_78070279_78070365_78070449_78070772
ENSMUSG00000019461.13_69737443_69741862_1	chr11	+	1763	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	0	1022	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTAGAAGCCGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	69737442	69741862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ENSMUSG00000019461.13_69737443_69741870_1	chr11	+	1771	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	0	1014	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCGGATGTGATGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	69737442	69741870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ENSMUSG00000019461.13_69737732_69741870_1	chr11	+	1698	7	FSM	ENSMUSG00000019461.13	ENSMUST00000019605.4	1927	7	230	-1	230	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCGGATGTGATGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	69737731	69741870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ENSMUSG00000019461.13_69738205_69742050_1	chr11	+	1664	6	ISM	ENSMUSG00000019461.13	ENSMUST00000019605.4	1927	7	703	-181	703	181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTGCCCCATAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	69738204	69742050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ENSMUSG00000019461.13_69738256_69742111_1	chr11	+	1674	6	ISM	ENSMUSG00000019461.13	ENSMUST00000019605.4	1927	7	754	-242	754	242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGTATTGCTACTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	69738255	69742111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ENSMUSG00000019461.13_69738327_69742167_1	chr11	+	1659	6	ISM	ENSMUSG00000019461.13	ENSMUST00000019605.4	1927	7	825	-298	825	298	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTCAAGTCCTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	69738326	69742167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ENSMUSG00000019461.13_69738752_69742419_1	chr11	+	1672	4	ISM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	1309	465	1250	-465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAGTTCAGGACCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	69738751	69742419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69738850_69739039_69739202_69740837_69741000_69741169
ENSMUSG00000019461.13_69740867_69742721_1	chr11	+	1685	2	ISM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	3424	163	3365	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGAGGACAAATCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	69740866	69742721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69741000_69741169
ENSMUSG00000019461.13_69740922_69742768_1	chr11	+	1677	2	ISM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	3479	116	3420	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAACATAAAGTCATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	69740921	69742768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69741000_69741169
ENSMUSG00000019467.16_127018394_127019589_1	chr10	-	703	3	ISM	ENSMUSG00000019467.16	ENSMUST00000218654.2	2475	15	5052	-1	5052	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTTGTTGTCTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	127019589	127018393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127018813_127019066_127019279_127019517
ENSMUSG00000019467.16_127018400_127019679_1	chr10	-	787	3	ISM	ENSMUSG00000019467.16	ENSMUST00000218654.2	2475	15	4962	5	4962	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCACTGAGGTTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	127019679	127018399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127018813_127019066_127019279_127019517
ENSMUSG00000019467.16_127018588_127020050_1	chr10	-	788	4	ISM	ENSMUSG00000019467.16	ENSMUST00000218654.2	2475	15	4591	193	4591	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAAGGACTCTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	127020050	127018587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880
ENSMUSG00000019467.16_127018724_127020306_1	chr10	-	729	5	ISM	ENSMUSG00000019467.16	ENSMUST00000218654.2	2475	15	4335	329	4335	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGAAGATGAGCTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	127020306	127018723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260
ENSMUSG00000019467.16_127019066_127020848_1	chr10	-	817	6	ISM	ENSMUSG00000019467.16	ENSMUST00000218654.2	2475	15	3793	671	3793	-478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGGAATAGTTTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	127020848	127019065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755
ENSMUSG00000019467.16_127019197_127021055_1	chr10	-	790	7	ISM	ENSMUSG00000019467.16	ENSMUST00000218654.2	2475	15	3586	802	3586	-609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGAGAATGCGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	127021055	127019196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951
ENSMUSG00000019467.16_127019542_127021523_1	chr10	-	820	8	ISM	ENSMUSG00000019467.16	ENSMUST00000218654.2	2475	15	3118	1147	3118	-954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCAGCGTGACTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	127021523	127019541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021226_127021443
ENSMUSG00000019467.16_127019878_127021795_1	chr10	-	757	8	ISM	ENSMUSG00000019467.16	ENSMUST00000218654.2	2475	15	2846	1483	2846	-1290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCGGGGCATATAGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	127021795	127019877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021226_127021443_127021548_127021728
ENSMUSG00000019467.16_127020025_127022793_1	chr10	-	733	10	ISM	ENSMUSG00000019467.16	ENSMUST00000218654.2	2475	15	1848	1630	1848	-1437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGCTGGGGGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	127022793	127020024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747
ENSMUSG00000019467.16_127020995_127025478_1	chr10	-	791	8	ISM	ENSMUSG00000019467.16	ENSMUST00000222006.2	1896	16	380	2407	214	-2407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGCATGTGCTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	127025478	127020994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127021042_127021155_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127025363
ENSMUSG00000019467.16_127021444_127025858_1	chr10	-	797	7	ISM	ENSMUSG00000019467.16	ENSMUST00000222006.2	1896	16	0	2856	0	-2856	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGATGGAGCCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	127025858	127021443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127025363_127025479_127025735
ENSMUSG00000019470.13_3660087_3663645_1	chr8	-	1456	11	ISM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	7671	0	7671	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTCTTGACCTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	3663645	3660086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589
ENSMUSG00000019470.13_3660382_3663858_1	chr8	-	1376	11	ISM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	7458	295	7458	-295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCCAACCCTGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	3663858	3660381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798
ENSMUSG00000019470.13_3660847_3664389_1	chr8	-	1444	10	ISM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	6927	760	6927	-760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTTCTTTAACCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	3664389	3660846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244
ENSMUSG00000019470.13_3660973_3666048_1	chr8	-	1373	11	ISM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	5268	886	5268	-886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGCAATGAGGATACCATC	NA	NA	NA	NA	NA	NA	NA	NA	3666048	3660972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993
ENSMUSG00000019470.13_3661114_3666158_1	chr8	-	1437	10	ISM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	5158	1027	5158	-1027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGGTTGTGCCTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	3666158	3661113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993
ENSMUSG00000019470.13_3661223_3666308_1	chr8	-	1387	11	ISM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	5008	1136	5008	-1136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCCCGTGAGATGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	3666308	3661222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249
ENSMUSG00000019470.13_3661450_3668084_1	chr8	-	1423	11	ISM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	3232	1363	3232	-1363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGAGATCTATGGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	3668084	3661449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054
ENSMUSG00000019470.13_3661529_3668120_1	chr8	-	1380	11	ISM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	3196	1442	3196	-1442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGTATGACCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	3668120	3661528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054
ENSMUSG00000019470.13_3661570_3668189_1	chr8	-	1408	11	ISM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	3127	1483	3127	-1483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCACAGCTGGAGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	3668189	3661569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054
ENSMUSG00000019470.13_3661794_3668588_1	chr8	-	1380	11	ISM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	2728	1707	2728	-1707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGACATCTGGAGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	3668588	3661793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542
ENSMUSG00000019470.13_3663049_3668993_1	chr8	-	1380	11	ISM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	2323	2962	2323	-2962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACCTGCGCATAGCCACG	NA	NA	NA	NA	NA	NA	NA	NA	3668993	3663048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944
ENSMUSG00000019470.13_3663368_3671270_1	chr8	-	1363	10	ISM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	46	3281	46	-3281	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGATGTGAGGACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	3671270	3663367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ENSMUSG00000019471.11_21049402_21052319_1	chr9	-	2001	3	ISM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	8959	4884	8959	-4884	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAACTTGCATGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	21052319	21049401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21051260_21052053_21052126_21052248
ENSMUSG00000019471.11_21049402_21052431_1	chr9	-	2113	3	ISM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	8847	4884	8847	-4884	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAACTTGCATGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	21052431	21049401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21051260_21052053_21052126_21052248
ENSMUSG00000019471.11_21049504_21053341_1	chr9	-	2046	4	ISM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	7937	4986	7937	-4986	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCATCCTCTGGGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	21053341	21049503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306
ENSMUSG00000019471.11_21049633_21053539_1	chr9	-	2036	5	ISM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	7739	5115	7739	-5115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTTCCTGTAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	21053539	21049632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508
ENSMUSG00000019471.11_21049687_21053590_1	chr9	-	2033	5	ISM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	7688	5169	7688	-5169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCTGAGAAGACCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	21053590	21049686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508
ENSMUSG00000019471.11_21049874_21053826_1	chr9	-	1989	6	ISM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	7452	5356	7452	-5356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCGGTGAAAATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	21053826	21049873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717
ENSMUSG00000019471.11_21050069_21054490_1	chr9	-	2042	7	ISM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	6788	5551	6788	-5551	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGAAAGAATGTAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	21054490	21050068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242
ENSMUSG00000019471.11_21050178_21061123_1	chr9	-	2036	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	155	5660	155	-5660	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCAGTGGCCCTCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	21061123	21050177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
ENSMUSG00000019471.11_21050256_21061238_1	chr9	-	2073	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	40	5738	40	-5738	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAATTTATGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	21061238	21050255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
ENSMUSG00000019471.11_21050294_21061278_1	chr9	-	2075	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	0	5776	0	-5776	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGCTGGCATCAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	21061278	21050293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
ENSMUSG00000019478.18_124532807_124554078_1	chr8	+	196	3	ISM	ENSMUSG00000019478.18	ENSMUST00000117702.2	1080	7	0	7146	0	-7146	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACCATAGGAGTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	124532806	124554078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124532906_124550552_124550634_124554062
ENSMUSG00000019478.18_124532807_124554131_1	chr8	+	249	3	ISM	ENSMUSG00000019478.18	ENSMUST00000117702.2	1080	7	0	7093	0	-7093	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAAAGTTACAGATATGG	NA	NA	NA	NA	NA	NA	NA	NA	124532806	124554131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124532906_124550552_124550634_124554062
ENSMUSG00000019478.18_124550552_124555774_1	chr8	+	237	3	ISM	ENSMUSG00000019478.18	ENSMUST00000117702.2	1080	7	17745	5450	17745	-5450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTGTCTATGACATCAC	NA	NA	NA	NA	NA	NA	NA	NA	124550551	124555774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124550634_124554062_124554178_124555734
ENSMUSG00000019478.18_124557004_124560766_1	chr8	+	232	3	ISM	ENSMUSG00000019478.18	ENSMUST00000117702.2	1080	7	24197	458	24197	-458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGAGGATGGGCTCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	124557003	124560766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124557127_124559541_124559638_124560753
ENSMUSG00000019478.18_124557069_124560815_1	chr8	+	216	3	ISM	ENSMUSG00000019478.18	ENSMUST00000117702.2	1080	7	24262	409	24262	-409	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTCACCTCGGCGTAC	NA	NA	NA	NA	NA	NA	NA	NA	124557068	124560815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124557127_124559541_124559638_124560753
ENSMUSG00000019478.18_124560808_124561566_1	chr8	+	213	2	ISM	ENSMUSG00000019478.18	ENSMUST00000118535.9	1419	8	28084	460	28001	342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCGAACTAACTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	124560807	124561566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124560887_124561432
ENSMUSG00000019478.18_124560859_124561618_1	chr8	+	214	2	ISM	ENSMUSG00000019478.18	ENSMUST00000118535.9	1419	8	28135	408	28052	394	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTGCCCCACACGTACC	NA	NA	NA	NA	NA	NA	NA	NA	124560858	124561618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124560887_124561432
ENSMUSG00000019487.12_57556500_57562106_1	chr17	+	779	8	ISM	ENSMUSG00000019487.12	ENSMUST00000224152.2	1812	15	-48	8042	0	-8042	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGCAAATGCTTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	57556499	57562106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017
ENSMUSG00000019487.12_57560346_57564299_1	chr17	+	768	7	ISM	ENSMUSG00000019487.12	ENSMUST00000224947.2	2016	14	3891	6128	3798	-5849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAAGAGCGGAACCGAG	NA	NA	NA	NA	NA	NA	NA	NA	57560345	57564299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234
ENSMUSG00000019487.12_57561057_57568422_1	chr17	+	819	6	ISM	ENSMUSG00000019487.12	ENSMUST00000224947.2	2016	14	4602	2005	4509	-1726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGAGGCATGGCCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	57561056	57568422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289
ENSMUSG00000019487.12_57562018_57570148_1	chr17	+	1170	8	ISM	ENSMUSG00000019487.12	ENSMUST00000224152.2	1812	15	5470	0	5470	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCACCAGAGGGGGACGA	NA	NA	NA	NA	NA	NA	NA	NA	57562017	57570148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_57562165_57562272_57562468_57563859_57564028_57564234_57564345_57568289_57568423_57568639_57568789_57569353_57569473_57569999
ENSMUSG00000019487.12_57562349_57570191_1	chr17	+	822	6	ISM	ENSMUSG00000019487.12	ENSMUST00000224947.2	2016	14	5894	236	5801	43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCCACAGGGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	57562348	57570191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569353_57569473_57569999
ENSMUSG00000019487.12_57562398_57570427_1	chr17	+	1177	7	ISM	ENSMUSG00000019487.12	ENSMUST00000224152.2	1812	15	5850	-279	5850	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTGGAGTCTGCACCGC	NA	NA	NA	NA	NA	NA	NA	NA	57562397	57570427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_57562468_57563859_57564028_57564234_57564345_57568289_57568423_57568639_57568789_57569353_57569473_57569999
ENSMUSG00000019494.15_138159362_138160487_1	chr5	+	427	4	ISM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	29	2421	0	-1753	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAGAAGCTCAAATATGT	NA	NA	NA	NA	NA	NA	NA	NA	138159361	138160487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398
ENSMUSG00000019494.15_138159634_138160646_1	chr5	+	410	4	ISM	ENSMUSG00000019494.15	ENSMUST00000110951.8	1098	10	272	1594	272	-1594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTTGTTGACCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	138159633	138160646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138159760_138159935_138160068_138160398_138160488_138160583
ENSMUSG00000019494.15_138160399_138161681_1	chr5	+	408	5	ISM	ENSMUSG00000019494.15	ENSMUST00000110951.8	1098	10	1037	559	1037	-559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGAGAGGTGCCTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	138160398	138161681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588
ENSMUSG00000019494.15_138160582_138161871_1	chr5	+	422	5	ISM	ENSMUSG00000019494.15	ENSMUST00000110951.8	1098	10	1220	369	1220	-369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTTGACACCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	138160581	138161871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770
ENSMUSG00000019494.15_138161477_138162181_1	chr5	+	408	4	ISM	ENSMUSG00000019494.15	ENSMUST00000110951.8	1098	10	2115	59	2115	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGGACCTGAGTACCAC	NA	NA	NA	NA	NA	NA	NA	NA	138161476	138162181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138161507_138161588_138161682_138161770_138161872_138161997
ENSMUSG00000019505.8_62441997_62443210_1	chr11	+	670	2	FSM	ENSMUSG00000019505.8	ENSMUST00000019649.4	1499	2	0	829	0	-674	multi-exon	FALSE	canonical	NA	NA	NA	NA	5123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGAAGACCCTGACCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	62441996	62443210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_62442422_62442965
ENSMUSG00000019505.8_62441997_62443362_1	chr11	+	593	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	0	-522	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTCTGATTACAACATC	NA	NA	NA	NA	NA	NA	NA	NA	62441996	62443362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_62442422_62443194
ENSMUSG00000019505.8_62442164_62443210_1	chr11	+	503	2	FSM	ENSMUSG00000019505.8	ENSMUST00000019649.4	1499	2	167	829	167	-674	multi-exon	FALSE	canonical	NA	NA	NA	NA	2384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGAAGACCCTGACCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	62442163	62443210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_62442422_62442965
ENSMUSG00000019505.8_62442164_62443679_1	chr11	+	515	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	167	-205	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGCAAGACCATCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	62442163	62443679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_62442422_62443422
ENSMUSG00000019505.8_62442302_62443362_1	chr11	+	517	2	FSM	ENSMUSG00000019505.8	ENSMUST00000019649.4	1499	2	305	677	305	-522	multi-exon	FALSE	canonical	NA	NA	NA	NA	3090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTCTGATTACAACATC	NA	NA	NA	NA	NA	NA	NA	NA	62442301	62443362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_62442422_62442965
ENSMUSG00000019505.8_62443414_62443889_1	chr11	+	248	2	FSM	ENSMUSG00000019505.8	ENST00000376781.2	229	2	-14	-5	-14	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCGGTCTGCATTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	62443413	62443889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_62443476_62443703
ENSMUSG00000019505.8_62443439_62443889_1	chr11	+	222	2	NNC	ENSMUSG00000019505.8	novel	271	2	NA	NA	11	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCGGTCTGCATTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	62443438	62443889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_62443486_62443714
ENSMUSG00000019518.12_138170628_138175148_1	chr5	+	829	10	ISM	ENSMUSG00000019518.12	ENSMUST00000019662.11	3479	15	364	3543	364	-3543	internal_fragment	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGGGACCAAGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	138170627	138175148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138170700_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078
ENSMUSG00000019528.19_20176248_20209342_1	chr3	-	1778	7	NNC	ENSMUSG00000019528.19	novel	1922	7	NA	NA	-82	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTGTTTAAGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	20209342	20176247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_20177029_20179421_20179642_20192180_20192308_20204702_20204866_20205116_20205287_20206893_20207030_20209161
ENSMUSG00000019528.19_20176248_20209481_1	chr3	-	1917	7	NNC	ENSMUSG00000019528.19	novel	1922	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTGTTTAAGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	20209481	20176247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_20177029_20179421_20179642_20192180_20192308_20204702_20204866_20205116_20205292_20206893_20207025_20209161
ENSMUSG00000019528.19_20176248_20209481_2	chr3	-	1917	7	NNC	ENSMUSG00000019528.19	novel	1922	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTGTTTAAGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	20209481	20176247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_20177029_20179421_20179642_20192180_20192308_20204702_20204866_20205116_20205287_20206893_20207030_20209161
ENSMUSG00000019528.19_20176720_20192269_1	chr3	-	669	4	ISM	ENSMUSG00000019528.19	ENST00000345003.9	1246	7	14762	63	14762	-63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGGGCAAATGTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	20192269	20176719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_20177029_20177285_20177337_20179421_20179642_20192180
ENSMUSG00000019528.19_20176829_20204773_1	chr3	-	669	5	ISM	ENSMUSG00000019528.19	ENST00000345003.9	1246	7	2258	172	2258	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGTCTTAGGCACGTT	NA	NA	NA	NA	NA	NA	NA	NA	20204773	20176828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_20177029_20177285_20177337_20179421_20179642_20192180_20192308_20204702
ENSMUSG00000019528.19_20176874_20204833_1	chr3	-	684	5	ISM	ENSMUSG00000019528.19	ENST00000345003.9	1246	7	2198	217	2198	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACACTTACCTGCAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	20204833	20176873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_20177029_20177285_20177337_20179421_20179642_20192180_20192308_20204702
ENSMUSG00000019528.19_20176980_20205179_1	chr3	-	673	6	ISM	ENSMUSG00000019528.19	ENST00000345003.9	1246	7	1852	323	1852	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCACCACAACCTTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	20205179	20176979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_20177029_20177285_20177337_20179421_20179642_20192180_20192308_20204702_20204866_20205116
ENSMUSG00000019528.19_20177017_20205271_1	chr3	-	728	6	ISM	ENSMUSG00000019528.19	ENST00000345003.9	1246	7	1760	360	1760	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCTTGTCAGACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	20205271	20177016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_20177029_20177285_20177337_20179421_20179642_20192180_20192308_20204702_20204866_20205116
ENSMUSG00000019539.12_44732337_44733087_1	chr7	-	549	2	ISM	ENSMUSG00000019539.12	ENSMUST00000211352.2	1453	7	8558	0	8558	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTGTCTGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	44733087	44732336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44732788_44732989
ENSMUSG00000019539.12_44732661_44736261_1	chr7	-	561	4	ISM	ENSMUSG00000019539.12	ENSMUST00000211352.2	1453	7	5384	324	5384	-324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGACCACATGACCACATG	NA	NA	NA	NA	NA	NA	NA	NA	44736261	44732660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088
ENSMUSG00000019539.12_44733046_44738059_1	chr7	-	516	4	ISM	ENSMUSG00000019539.12	ENSMUST00000211352.2	1453	7	3586	709	3586	-709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACCAGCCCCTGGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	44738059	44733045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44733190_44734327_44734389_44736088_44736262_44737921
ENSMUSG00000019539.12_44733046_44740889_1	chr7	-	606	5	ISM	ENSMUSG00000019539.12	ENSMUST00000211352.2	1453	7	756	709	756	-709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACCAGCCCCTGGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	44740889	44733045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864
ENSMUSG00000019539.12_44736236_44741575_1	chr7	-	524	4	ISM	ENSMUSG00000019539.12	ENSMUST00000211352.2	1453	7	70	3899	70	-3899	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCGAGACCTACAAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	44741575	44736235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44736262_44737921_44738125_44740864_44741113_44741528
ENSMUSG00000019539.12_44736245_44741549_1	chr7	-	498	4	ISM	ENSMUSG00000019539.12	ENSMUST00000019683.11	1462	7	96	3908	96	-3908	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAGGATGCCGAGACCTA	NA	NA	NA	NA	NA	NA	NA	NA	44741549	44736244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44736262_44737921_44738125_44740864_44741113_44741519
ENSMUSG00000019578.12_56374762_56376021_1	chr17	-	984	2	ISM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	6007	717	6007	-717	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTGGTTGCTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	56376021	56374761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56375684_56375959
ENSMUSG00000019578.12_56374950_56376291_1	chr17	-	991	3	ISM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	5737	905	5737	-905	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATGTTTGCCCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	56376291	56374949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56375684_56375959_56376109_56376183
ENSMUSG00000019578.12_56375250_56377727_1	chr17	-	1095	6	ISM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	4301	1205	4301	-1205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCCAGTGTTTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	56377727	56375249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651
ENSMUSG00000019578.12_56375536_56379529_1	chr17	-	1036	8	ISM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	2499	1491	2499	-1491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGCTCCAGTCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	56379529	56375535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400
ENSMUSG00000019578.12_56375974_56380104_1	chr17	-	971	9	ISM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	1924	1929	1924	-1929	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGTGGGCTGGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	56380104	56375973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072
ENSMUSG00000019578.12_56376026_56380159_1	chr17	-	974	9	ISM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	1869	1981	1869	-1981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGGCCTCCGGTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	56380159	56376025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072
ENSMUSG00000019578.12_56376056_56380236_1	chr17	-	1021	9	ISM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	1792	2011	1792	-2011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCTACAGAACGACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	56380236	56376055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072
ENSMUSG00000019578.12_56376183_56381848_1	chr17	-	982	9	ISM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	180	2138	180	-2138	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGACCACCCCAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	56381848	56376182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
ENSMUSG00000019578.12_56376393_56382017_1	chr17	-	1020	8	ISM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	11	2348	11	-2348	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGCCCTTATGAGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	56382017	56376392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
ENSMUSG00000019579.14_56483865_56490849_1	chr17	-	518	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	71	1121	71	-1121	multi-exon	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTAGGGCACTGGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	56490849	56483864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
ENSMUSG00000019659.9_110485680_110540370_1	chr9	+	421	7	FSM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	109	304	109	-304	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCGGACAAGAGGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	110485679	110540370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_110485727_110521383_110521452_110537513_110537594_110538961_110539024_110539194_110539230_110540153_110540231_110540318
ENSMUSG00000019659.9_110521382_110540370_1	chr9	+	376	6	ISM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	35811	304	35811	-304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCGGACAAGAGGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	110521381	110540370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110521452_110537513_110537594_110538961_110539024_110539194_110539230_110540153_110540231_110540318
ENSMUSG00000019659.9_110540153_110540675_1	chr9	+	435	2	ISM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	54582	-1	54582	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTAGTTGCTCTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	110540152	110540675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110540231_110540318
ENSMUSG00000019699.17_176852139_176859231_1	chr1	-	893	2	ISM	ENSMUSG00000019699.17	ENSMUST00000111160.9	4735	13	217102	2458	217102	-2440	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCACCTCTGATGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	176859231	176852138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_176853016_176859215
ENSMUSG00000019699.17_176852279_176871387_1	chr1	-	887	3	ISM	ENSMUSG00000019699.17	ENSMUST00000111160.9	4735	13	204946	2598	204946	-2580	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCCCAGGTTTCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	176871387	176852278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_176853016_176859215_176859319_176871340
ENSMUSG00000019699.17_176852380_176877685_1	chr1	-	909	4	ISM	ENSMUSG00000019699.17	ENSMUST00000111160.9	4735	13	198648	2699	198648	-2681	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTAGGAAACATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	176877685	176852379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603
ENSMUSG00000019699.17_176852559_176886927_1	chr1	-	891	5	ISM	ENSMUSG00000019699.17	ENSMUST00000111160.9	4735	13	189406	2878	189406	-2860	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTCTAGGTACATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	176886927	176852558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899
ENSMUSG00000019699.17_176852703_176894849_1	chr1	-	921	6	ISM	ENSMUSG00000019699.17	ENSMUST00000111160.9	4735	13	181484	3022	181484	-3004	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGCTACTGTCTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	176894849	176852702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776
ENSMUSG00000019699.17_176852971_176924594_1	chr1	-	900	9	ISM	ENSMUSG00000019699.17	ENSMUST00000111160.9	4735	13	151739	3290	151739	-3272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCTCAGTTCTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	176924594	176852970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532
ENSMUSG00000019699.17_176859290_176930570_1	chr1	-	894	9	ISM	ENSMUSG00000019699.17	ENSMUST00000111160.9	4735	13	145763	9609	145763	-9591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGAAACAGACACCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	176930570	176859289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527
ENSMUSG00000019699.17_176871341_176930672_1	chr1	-	967	8	ISM	ENSMUSG00000019699.17	ENSMUST00000111160.9	4735	13	145661	21660	145661	-21642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTGTCTCTAAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	176930672	176871340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527
ENSMUSG00000019699.17_176877604_176937304_1	chr1	-	991	8	ISM	ENSMUSG00000019699.17	ENSMUST00000111160.9	4735	13	139029	27923	139029	-27905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTTCAATGATGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	176937304	176877603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192
ENSMUSG00000019699.17_176877796_176958662_1	chr1	-	925	9	ISM	ENSMUSG00000019699.17	ENSMUST00000111160.9	4735	13	117671	28115	117671	-28097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCGTGGACTGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	176958662	176877795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536
ENSMUSG00000019699.17_176886897_177085769_1	chr1	-	963	9	ISM	ENSMUSG00000019699.17	ENST00000672578.1	4682	13	-1	37198	0	-37198	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCCCAAGGAAAAATAACAC	NA	NA	NA	NA	NA	NA	NA	NA	177085769	176886896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177085711
ENSMUSG00000019710.14_87826813_87830974_1	chr3	+	1336	6	NNC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGTCTTAAAAGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	87826812	87830974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829791_87830241_87830373_87830516
ENSMUSG00000019715.15_29825535_29830144_1	chr2	+	676	6	ISM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	97	20239	97	-18492	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGGAGCAGCTTCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	29825534	29830144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093
ENSMUSG00000019715.15_29826066_29830255_1	chr2	+	667	5	ISM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	628	20128	628	-18381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCTGCTGAGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	29826065	29830255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093
ENSMUSG00000019715.15_29826185_29832569_1	chr2	+	661	6	ISM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	747	17814	747	-16067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAAGCTGAGGCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	29826184	29832569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549
ENSMUSG00000019715.15_29828550_29832674_1	chr2	+	658	5	ISM	ENSMUSG00000019715.15	ENST00000684314.1	1770	13	36	15962	36	-15962	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCCAAGGTCAAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	29828549	29832674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549
ENSMUSG00000019715.15_29828573_29840668_1	chr2	+	1311	10	ISM	ENSMUSG00000019715.15	ENST00000684314.1	1770	13	59	7968	59	-7968	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCATGTCTGGGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	29828572	29840668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613
ENSMUSG00000019715.15_29829147_29845700_1	chr2	+	1424	10	ISM	ENSMUSG00000019715.15	ENST00000684314.1	1770	13	633	2936	633	-2936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGGCTTGTTAAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	29829146	29845700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29845617
ENSMUSG00000019715.15_29829493_29847825_1	chr2	+	1341	10	ISM	ENSMUSG00000019715.15	ENST00000684314.1	1770	13	979	811	979	-811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGTTCTATTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	29829492	29847825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29845617_29845701_29847761
ENSMUSG00000019715.15_29830222_29848621_1	chr2	+	1313	10	ISM	ENSMUSG00000019715.15	ENST00000684314.1	1770	13	1708	15	1708	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTTATATATCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	29830221	29848621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29845617_29845701_29847761_29847826_29848458
ENSMUSG00000019715.15_29834002_29845669_1	chr2	+	690	6	ISM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	8564	4714	5488	-2967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTCTCATCAAAGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	29834001	29845669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617
ENSMUSG00000019715.15_29838899_29847825_1	chr2	+	719	6	ISM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	13461	2558	10385	-811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGTTCTATTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	29838898	29847825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761
ENSMUSG00000019715.15_29839243_29848614_1	chr2	+	654	6	ISM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	13805	1769	10729	-22	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCAGTGTGTTTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	29839242	29848614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ENSMUSG00000019715.15_29839293_29848678_1	chr2	+	668	6	ISM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	13855	1705	10779	42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTCTTGTCAGGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	29839292	29848678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ENSMUSG00000019715.15_29840632_29848787_1	chr2	+	693	5	ISM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	15194	1596	12118	151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCACTTGGTCTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	29840631	29848787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ENSMUSG00000019715.15_29840706_29848843_1	chr2	+	675	5	ISM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	15268	1540	12192	207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTCGGACCTGTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	29840705	29848843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ENSMUSG00000019738.16_29931457_29932751_1	chr7	+	671	6	FSM	ENSMUSG00000019738.16	ENSMUST00000019882.16	819	6	84	64	84	-59	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACCGCTGGACTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	29931456	29932751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_29931830_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ENSMUSG00000019738.16_29931457_29932812_1	chr7	+	732	6	FSM	ENSMUSG00000019738.16	ENSMUST00000019882.16	819	6	84	3	84	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTCCCGTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	29931456	29932812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_29931830_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ENSMUSG00000019738.16_29931621_29932815_1	chr7	+	571	6	FSM	ENSMUSG00000019738.16	ENSMUST00000019882.16	819	6	248	0	-136	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCCCGTGTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	29931620	29932815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_29931830_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ENSMUSG00000019761.11_99276093_99278127_1	chr11	-	1145	5	ISM	ENSMUSG00000019761.11	ENST00000635956.2	2105	8	2060	7	-1204	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACTATAAAAATCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	99278127	99276092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99276463_99276736_99277096_99277356_99277575_99277823_99277950_99278055
ENSMUSG00000019761.11_99276093_99278182_1	chr11	-	1200	5	ISM	ENSMUSG00000019761.11	ENST00000635956.2	2105	8	2005	7	-1259	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACTATAAAAATCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	99278182	99276092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99276463_99276736_99277096_99277356_99277575_99277823_99277950_99278055
ENSMUSG00000019761.11_99276305_99278480_1	chr11	-	1180	6	ISM	ENSMUSG00000019761.11	ENST00000635956.2	2105	8	1707	219	-1557	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAAATGTCCAAGAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	99278480	99276304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99276463_99276736_99277096_99277356_99277575_99277823_99277950_99278055_99278218_99278323
ENSMUSG00000019761.11_99276415_99278892_1	chr11	-	1127	7	ISM	ENSMUSG00000019761.11	ENST00000635956.2	2105	8	1295	329	1295	-322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGGTAGAGTCCTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	99278892	99276414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99276463_99276736_99277096_99277356_99277575_99277823_99277950_99278055_99278218_99278323_99278481_99278835
ENSMUSG00000019761.11_99276799_99279628_1	chr11	-	1107	7	ISM	ENSMUSG00000019761.11	ENST00000635956.2	2105	8	559	713	559	-706	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTCTTCCGGTGGCGGCG	NA	NA	NA	NA	NA	NA	NA	NA	99279628	99276798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99277096_99277356_99277575_99277823_99277950_99278055_99278218_99278323_99278481_99278835_99278919_99279564
ENSMUSG00000019761.11_99276934_99279778_1	chr11	-	1122	7	ISM	ENSMUSG00000019761.11	ENST00000635956.2	2105	8	409	848	409	-841	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCACGGAGGCAGTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	99279778	99276933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99277096_99277356_99277575_99277823_99277950_99278055_99278218_99278323_99278481_99278835_99278919_99279564
ENSMUSG00000019761.11_99277014_99279847_1	chr11	-	1111	7	ISM	ENSMUSG00000019761.11	ENST00000635956.2	2105	8	340	928	340	-921	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGTTCCGGCGGCGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	99279847	99277013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99277096_99277356_99277575_99277823_99277950_99278055_99278218_99278323_99278481_99278835_99278919_99279564
ENSMUSG00000019761.11_99277389_99279955_1	chr11	-	1105	6	ISM	ENSMUSG00000019761.11	ENST00000635956.2	2105	8	232	1303	232	-1296	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTACCGCAGCCTGCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	99279955	99277388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99277575_99277823_99277950_99278055_99278218_99278323_99278481_99278835_99278919_99279564
ENSMUSG00000019761.11_99277442_99280003_1	chr11	-	1100	6	ISM	ENSMUSG00000019761.11	ENST00000635956.2	2105	8	184	1356	184	-1349	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAGTACCAACAACTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	99280003	99277441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99277575_99277823_99277950_99278055_99278218_99278323_99278481_99278835_99278919_99279564
ENSMUSG00000019761.11_99277467_99280065_1	chr11	-	1137	6	ISM	ENSMUSG00000019761.11	ENST00000635956.2	2105	8	122	1381	122	-1374	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGCTGAGACCGAGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	99280065	99277466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99277575_99277823_99277950_99278055_99278218_99278323_99278481_99278835_99278919_99279564
ENSMUSG00000019761.11_99277503_99280076_1	chr11	-	1112	6	ISM	ENSMUSG00000019761.11	ENST00000635956.2	2105	8	111	1417	111	-1410	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATCTCCGCCCTGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	99280076	99277502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99277575_99277823_99277950_99278055_99278218_99278323_99278481_99278835_99278919_99279564
ENSMUSG00000019761.11_99277824_99280190_1	chr11	-	1154	5	ISM	ENSMUSG00000019761.11	ENST00000635956.2	2105	8	-3	1738	0	-1731	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACGTTAAATCTTATAACC	NA	NA	NA	NA	NA	NA	NA	NA	99280190	99277823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99277950_99278055_99278218_99278323_99278481_99278835_99278919_99279564
ENSMUSG00000019762.5_3495560_3501904_1	chr10	+	333	3	ISM	ENSMUSG00000019762.5	ENST00000229447.9	1077	5	5395	2312	5320	-2312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGTTCTGATCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	3495559	3501904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_3495702_3497004_3497165_3501873
ENSMUSG00000019762.5_3495617_3501951_1	chr10	+	323	3	ISM	ENSMUSG00000019762.5	ENST00000229447.9	1077	5	5452	2265	5377	-2265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGAAAGAAGAAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	3495616	3501951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_3495702_3497004_3497165_3501873
ENSMUSG00000019762.5_3497050_3504010_1	chr10	+	337	3	ISM	ENSMUSG00000019762.5	ENST00000229447.9	1077	5	6885	206	6810	-206	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTCTCTTGTTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	3497049	3504010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_3497165_3501873_3502031_3503945
ENSMUSG00000019762.5_3501872_3504144_1	chr10	+	358	2	ISM	ENSMUSG00000019762.5	ENST00000229447.9	1077	5	11707	72	11632	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCAGAGATGCCACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	3501871	3504144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_3502031_3503945
ENSMUSG00000019763.12_4352952_4353951_1	chr10	-	628	2	ISM	ENSMUSG00000019763.12	ENSMUST00000042251.11	3139	13	28437	1037	28437	-1037	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAGAAATTCACCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	4353951	4352951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_4353502_4353873
ENSMUSG00000019763.12_4353412_4364611_1	chr10	-	646	7	ISM	ENSMUSG00000019763.12	ENSMUST00000042251.11	3139	13	17777	1497	17777	-1497	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGCGTTCACTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	4364611	4353411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542
ENSMUSG00000019773.8_5749160_5750322_1	chr10	-	730	2	ISM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	5278	0	5278	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGTGTGCAGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5750322	5749159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5749823_5750255
ENSMUSG00000019773.8_5749350_5751242_1	chr10	-	744	3	ISM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	4358	190	4358	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGAGAACATTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	5751242	5749349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5749823_5750255_5750436_5751151
ENSMUSG00000019773.8_5749519_5752012_1	chr10	-	719	4	ISM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	3588	359	3588	-359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAATTTAAGAAAGTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5752012	5749518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868
ENSMUSG00000019773.8_5749530_5752056_1	chr10	-	747	4	NNC	ENSMUSG00000019773.8	novel	1940	5	NA	NA	3544	-370	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTCAACTTTAATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	5752056	5749529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_5749823_5750255_5750436_5751151_5751243_5751873
ENSMUSG00000019773.8_5749624_5752119_1	chr10	-	721	4	ISM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	3481	464	3481	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTCCTTTGCCTGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	5752119	5749623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868
ENSMUSG00000019773.8_5749674_5752185_1	chr10	-	737	4	ISM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	3415	514	3415	-514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAACAAAGACTGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	5752185	5749673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868
ENSMUSG00000019773.8_5750254_5752363_1	chr10	-	768	3	ISM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	3237	1094	3237	-1094	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATCGGGAAAGTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	5752363	5750253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5750436_5751151_5751243_5751868
ENSMUSG00000019773.8_5751147_5752533_1	chr10	-	761	2	ISM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	3067	1987	3067	-1987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCAAAGTGCTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	5752533	5751146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5751243_5751868
ENSMUSG00000019773.8_5751206_5755273_1	chr10	-	716	3	ISM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	327	2046	327	-2046	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACAATAAGGGGGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	5755273	5751205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5751243_5751868_5752533_5755258
ENSMUSG00000019773.8_5751946_5755394_1	chr10	-	723	2	ISM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	206	2786	206	-2786	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCTCTCCCGCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	5755394	5751945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5752533_5755258
ENSMUSG00000019774.9_5761887_5767557_1	chr10	-	1884	4	ISM	ENSMUSG00000019774.9	ENSMUST00000019908.9	2588	7	6353	0	6131	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAATTAACCATTATGGT	NA	NA	NA	NA	NA	NA	NA	NA	5767557	5761886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448
ENSMUSG00000019774.9_5762095_5768929_1	chr10	-	1860	5	ISM	ENSMUSG00000019774.9	ENSMUST00000019908.9	2588	7	4981	208	4759	-208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTTCATCTATTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	5768929	5762094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768800
ENSMUSG00000019774.9_5762425_5773710_1	chr10	-	1850	7	FSM	ENSMUSG00000019774.9	ENSMUST00000019908.9	2588	7	200	538	-22	-538	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAATGCCAGTGAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	5773710	5762424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768800_5768985_5770024_5770105_5773525
ENSMUSG00000019774.9_5762469_5773777_1	chr10	-	1873	7	FSM	ENSMUSG00000019774.9	ENSMUST00000019908.9	2588	7	133	582	-89	-582	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAGTTGGATAAAACATG	NA	NA	NA	NA	NA	NA	NA	NA	5773777	5762468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768800_5768985_5770024_5770105_5773525
ENSMUSG00000019774.9_5763212_5773640_1	chr10	-	856	6	FSM	ENSMUSG00000019774.9	ENST00000367231.9	898	6	48	-6	48	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAAGCTTCTTTGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	5773640	5763211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_5763407_5765551_5765670_5767448_5767613_5768800_5768985_5770024_5770105_5773525
ENSMUSG00000019774.9_5763212_5773640_2	chr10	-	855	6	NNC	ENSMUSG00000019774.9	novel	898	6	NA	NA	48	6	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAAGCTTCTTTGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	5773640	5763211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_5763407_5765551_5765670_5767448_5767613_5768800_5768985_5770025_5770105_5773525
ENSMUSG00000019777.17_36850566_36877607_1	chr10	+	1701	14	FSM	ENSMUSG00000019777.17	ENSMUST00000019911.14	2005	14	26	278	0	-277	multi-exon	TRUE	canonical	NA	NA	NA	NA	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCTTCCCTGTTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	36850565	36877607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_36850800_36861122_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874566_36876364_36876423_36877524
ENSMUSG00000019777.17_36850715_36873125_1	chr10	+	1032	9	ISM	ENSMUSG00000019777.17	ENST00000368632.6	1898	14	52	4759	52	1018	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGTTCAGGTTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	36850714	36873125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_36850800_36861105_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984
ENSMUSG00000019777.17_36850715_36877752_1	chr10	+	1697	14	FSM	ENSMUSG00000019777.17	ENSMUST00000019911.14	2005	14	175	133	52	-132	multi-exon	FALSE	canonical	NA	NA	NA	NA	2737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTTATGTGATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	36850714	36877752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_36850800_36861122_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874566_36876364_36876423_36877524
ENSMUSG00000019777.17_36850754_36873417_1	chr10	+	1021	10	ISM	ENSMUSG00000019777.17	ENST00000368632.6	1898	14	91	4467	91	1310	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGACCAGACTTCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	36850753	36873417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_36850800_36861105_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389
ENSMUSG00000019777.17_36861122_36877885_1	chr10	+	1746	13	ISM	ENSMUSG00000019777.17	ENST00000368632.6	1898	14	10459	-1	10459	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTGTCTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	36861121	36877885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874566_36876364_36876423_36877524
ENSMUSG00000019779.16_34359724_34484840_1	chr10	+	2089	8	FSM	ENSMUSG00000019779.16	ENSMUST00000170771.3	3406	8	208	1109	208	-1109	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTCACATTTCTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	34359723	34484840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_34360366_34423288_34423411_34459893_34460058_34462161_34462331_34467807_34467967_34481690_34481873_34483801_34483968_34484355
ENSMUSG00000019782.11_33872372_33878563_1	chr10	-	813	4	ISM	ENSMUSG00000019782.11	ENST00000487832.6	1236	8	16927	-1	16927	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTTACGAGAAGAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	33878563	33872371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_33872845_33877132_33877196_33877653_33877787_33878419
ENSMUSG00000019782.11_33872551_33888133_1	chr10	-	831	6	ISM	ENSMUSG00000019782.11	ENSMUST00000019917.6	1090	7	7487	0	7357	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTTACTTCCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	33888133	33872550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_33872845_33877132_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067
ENSMUSG00000019782.11_33872758_33895454_1	chr10	-	815	8	FSM	ENSMUSG00000019782.11	ENST00000487832.6	1236	8	36	385	36	-207	multi-exon	FALSE	canonical	NA	NA	NA	NA	1663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTTGCCCCAGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	33895454	33872757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_33872845_33877132_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33893190_33893289_33895361
ENSMUSG00000019782.11_33872760_33895441_1	chr10	-	800	8	FSM	ENSMUSG00000019782.11	ENST00000487832.6	1236	8	49	387	49	-209	multi-exon	FALSE	canonical	NA	NA	NA	NA	1628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCCTGTTGCCCCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	33895441	33872759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_33872845_33877132_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33893190_33893289_33895361
ENSMUSG00000019782.11_33872784_33895414_1	chr10	-	744	8	NNC	ENSMUSG00000019782.11	novel	1236	8	NA	NA	76	-233	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGTGAAGATGATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	33895414	33872783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_33872845_33877132_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33893195_33893289_33895361
ENSMUSG00000019782.11_33878448_33895383_1	chr10	-	335	4	ISM	ENSMUSG00000019782.11	ENSMUST00000019917.6	1090	7	237	5897	107	-5897	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAGGAAGCAGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	33895383	33878447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_33878564_33884988_33885120_33888067_33888134_33895361
ENSMUSG00000019782.11_33878505_33895432_1	chr10	-	327	4	ISM	ENSMUSG00000019782.11	ENSMUST00000019917.6	1090	7	188	5954	58	-5954	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAATGAAATAGTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	33895432	33878504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_33878564_33884988_33885120_33888067_33888134_33895361
ENSMUSG00000019792.9_30410221_30435232_1	chr10	-	1346	4	ISM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	41513	0	41513	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCCTATTTGATTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	30435232	30410220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159
ENSMUSG00000019792.9_30410388_30442502_1	chr10	-	1425	6	ISM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	34243	167	34243	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTAGTTTTCTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	30442502	30410387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421
ENSMUSG00000019792.9_30410512_30463507_1	chr10	-	1374	7	ISM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	13238	291	13238	-291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCACGTTAACTAACTACC	NA	NA	NA	NA	NA	NA	NA	NA	30463507	30410511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434
ENSMUSG00000019792.9_30410711_30466885_1	chr10	-	1441	9	ISM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	9860	490	9860	-490	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATACTCAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	30466885	30410710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838
ENSMUSG00000019792.9_30411074_30476652_1	chr10	-	1413	13	FSM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	93	853	93	-853	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATAAAAAGGCTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	30476652	30411073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
ENSMUSG00000019792.9_30411141_30476691_1	chr10	-	1385	13	FSM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	54	920	54	-920	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGCCAAGGAAGAAAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	30476691	30411140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
ENSMUSG00000019792.9_30411193_30476745_1	chr10	-	1387	13	FSM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	0	972	0	-972	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGACATAATTCTTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	30476745	30411192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
ENSMUSG00000019794.14_7614484_7627413_1	chr10	+	745	5	ISM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	12720	11500	12720	-11500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTATGCCCGTATCA	NA	NA	NA	NA	NA	NA	NA	NA	7614483	7627413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307
ENSMUSG00000019794.14_7614625_7628569_1	chr10	+	666	6	ISM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	12861	10344	12861	-10344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATGCAAGACAACGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	7614624	7628569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507
ENSMUSG00000019794.14_7617253_7635499_1	chr10	+	684	6	ISM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	15489	3414	15489	-3414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATTCCATTTGCAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	7617252	7635499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460
ENSMUSG00000019794.14_7619416_7636561_1	chr10	+	662	6	ISM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	17652	2352	17652	-2352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCCATGGGACATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	7619415	7636561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498
ENSMUSG00000019794.14_7619467_7636612_1	chr10	+	662	6	ISM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	17703	2301	17703	-2301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATATTCCATTACCATCA	NA	NA	NA	NA	NA	NA	NA	NA	7619466	7636612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498
ENSMUSG00000019794.14_7624639_7637133_1	chr10	+	677	6	ISM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	22875	1780	22875	-1780	internal_fragment	TRUE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTACTTCTCTCACATT	NA	NA	NA	NA	NA	NA	NA	NA	7624638	7637133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006
ENSMUSG00000019794.14_7627353_7638618_1	chr10	+	674	6	ISM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	25589	295	25589	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAAGAGAAGCAATGCAC	NA	NA	NA	NA	NA	NA	NA	NA	7627352	7638618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
ENSMUSG00000019794.14_7628602_7638828_1	chr10	+	729	5	ISM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	26838	85	26838	-85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGTGCTATATTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	7628601	7638828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
ENSMUSG00000019795.18_7505761_7513865_1	chr10	-	1026	2	ISM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	25507	624	25202	-616	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTTTTTAATAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	7513865	7505760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7506741_7513819
ENSMUSG00000019795.18_7505829_7513901_1	chr10	-	994	2	ISM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	25471	692	25166	-684	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGCTGCATTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	7513901	7505828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7506741_7513819
ENSMUSG00000019795.18_7506012_7516493_1	chr10	-	1020	4	ISM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	22879	875	22574	-867	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGCACAGTTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	7516493	7506011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458
ENSMUSG00000019795.18_7506079_7516533_1	chr10	-	993	4	ISM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	22839	942	22534	-934	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTATTTGTTTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	7516533	7506078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458
ENSMUSG00000019795.18_7506185_7520151_1	chr10	-	996	5	ISM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	19221	1048	18916	-1040	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGACGATGATGGCAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	7520151	7506184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088
ENSMUSG00000019795.18_7506246_7513808_1	chr10	-	531	2	ISM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	25259	1101	25259	-1101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAGATACAATCAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	7513808	7506245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7506741_7513772
ENSMUSG00000019795.18_7506340_7524919_1	chr10	-	1020	7	ISM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	14453	1203	14148	-1195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTAGCCAATGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	7524919	7506339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814
ENSMUSG00000019795.18_7506364_7513955_1	chr10	-	560	2	ISM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	25112	1219	25112	-1219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCACATTCACAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	7513955	7506363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7506741_7513772
ENSMUSG00000019795.18_7506490_7539025_1	chr10	-	1057	8	FSM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	347	1353	42	-1345	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAATATTAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	7539025	7506489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUSG00000019795.18_7506529_7539067_1	chr10	-	1060	8	FSM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	305	1392	0	-1384	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTGCGTGTGTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	7539067	7506528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUSG00000019795.18_7506535_7516480_1	chr10	-	531	4	ISM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	22587	1390	22587	-1390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCGTTAACTGCGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	7516480	7506534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458
ENSMUSG00000019795.18_7506618_7539080_1	chr10	-	984	8	FSM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	292	1481	-13	-1473	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTTTCAGCATGAAAACG	NA	NA	NA	NA	NA	NA	NA	NA	7539080	7506617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUSG00000019795.18_7506683_7520140_1	chr10	-	534	5	ISM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	18927	1538	18927	-1538	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCGGTCCTTACAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	7520140	7506682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458_7516580_7520088
ENSMUSG00000019795.18_7513851_7539251_1	chr10	-	1001	7	ISM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	121	8714	121	-8706	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAACAGATAAAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	7539251	7513850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUSG00000019795.18_7513911_7539372_1	chr10	-	1062	7	ISM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	0	8774	0	-8766	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAAGCTACAAGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	7539372	7513910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUSG00000019797.12_43401129_43416687_1	chr10	-	1092	4	FSM	ENSMUSG00000019797.12	ENST00000405204.6	1086	4	4	-10	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTCACCGGAGCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	43416687	43401128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_43401405_43406593_43406667_43408671_43409143_43416415
ENSMUSG00000019797.12_43401129_43416687_2	chr10	-	1087	4	NNC	ENSMUSG00000019797.12	novel	1086	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTCACCGGAGCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	43416687	43401128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_43401405_43406593_43406662_43408671_43409143_43416415
ENSMUSG00000019797.12_43401129_43416687_4	chr10	-	1086	4	NNC	ENSMUSG00000019797.12	novel	1086	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTCACCGGAGCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	43416687	43401128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_43401399_43406593_43406667_43408671_43409143_43416415
ENSMUSG00000019804.13_42378027_42411366_1	chr10	+	1395	4	NNC	ENSMUSG00000019804.13	novel	1401	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3037	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	42378026	42411366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_42378483_42401949_42402046_42409144_42409270_42410648
ENSMUSG00000019804.13_42378027_42411366_2	chr10	+	1394	4	NNC	ENSMUSG00000019804.13	novel	1401	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	42378026	42411366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_42378489_42401949_42402046_42409151_42409270_42410648
ENSMUSG00000019806.14_13522912_13529420_1	chr10	-	630	2	ISM	ENSMUSG00000019806.14	ENSMUST00000162610.8	1554	6	215304	114	215146	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAATAGTATCTGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	13529420	13522911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13523451_13529329
ENSMUSG00000019806.14_13523013_13566314_1	chr10	-	649	3	ISM	ENSMUSG00000019806.14	ENSMUST00000162610.8	1554	6	178410	215	178252	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGGAGTCATGACACT	NA	NA	NA	NA	NA	NA	NA	NA	13566314	13523012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13523451_13529329_13529494_13566267
ENSMUSG00000019806.14_13523180_13677659_1	chr10	-	619	4	ISM	ENSMUSG00000019806.14	ENSMUST00000162610.8	1554	6	67065	382	66907	233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCCCTCTTTTCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	13677659	13523179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13523451_13529329_13529494_13566267_13566384_13677591
ENSMUSG00000019813.17_41595645_41621927_1	chr10	-	1388	9	FSM	ENSMUSG00000019813.17	ENST00000359793.7	1380	9	-8	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGCCGTCTCCGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	41621927	41595644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_41595904_41597552_41597698_41598879_41599119_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766
ENSMUSG00000019813.17_41595645_41621927_2	chr10	-	1381	9	NNC	ENSMUSG00000019813.17	novel	1380	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGCCGTCTCCGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	41621927	41595644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_41595904_41597552_41597698_41598879_41599119_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616951_41619037_41619218_41621766
ENSMUSG00000019813.17_41595645_41621927_3	chr10	-	1382	9	NNC	ENSMUSG00000019813.17	novel	1380	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGCCGTCTCCGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	41621927	41595644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_41595904_41597552_41597698_41598879_41599119_41604623_41604711_41605326_41605399_41606994_41607112_41616835_41616958_41619037_41619218_41621766
ENSMUSG00000019813.17_41595645_41621927_4	chr10	-	1382	9	NNC	ENSMUSG00000019813.17	novel	1380	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGCCGTCTCCGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	41621927	41595644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_41595904_41597552_41597698_41598879_41599119_41604623_41604711_41605326_41605405_41606994_41607106_41616835_41616958_41619037_41619218_41621766
ENSMUSG00000019813.17_41604624_41685603_1	chr10	-	770	7	ISM	ENSMUSG00000019813.17	ENST00000368968.6	1181	9	18	7080	0	703	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATATTATATACAACTTAT	NA	NA	NA	NA	NA	NA	NA	NA	41685603	41604623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
ENSMUSG00000019813.17_41605327_41685720_1	chr10	-	795	6	FSM	ENSMUSG00000019813.17	ENST00000521277.5	795	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCAGCATCCTTTATCC	NA	NA	NA	NA	NA	NA	NA	NA	41685720	41605326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_41605405_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621961_41685568
ENSMUSG00000019813.17_41605327_41685720_2	chr10	-	789	6	NNC	ENSMUSG00000019813.17	novel	795	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCAGCATCCTTTATCC	NA	NA	NA	NA	NA	NA	NA	NA	41685720	41605326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_41605399_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621961_41685568
ENSMUSG00000019813.17_41605327_41685720_3	chr10	-	794	6	NNC	ENSMUSG00000019813.17	novel	795	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCAGCATCCTTTATCC	NA	NA	NA	NA	NA	NA	NA	NA	41685720	41605326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_41605405_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621961_41685569
ENSMUSG00000019814.6_13054420_13054895_1	chr10	-	350	2	ISM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	14017	536	14017	-536	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTCCCCTGAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	13054895	13054419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13054741_13054866
ENSMUSG00000019814.6_13054473_13054949_1	chr10	-	351	2	ISM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	13963	589	13963	-589	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTCAGCTAACTTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	13054949	13054472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13054741_13054866
ENSMUSG00000019814.6_13054701_13055797_1	chr10	-	353	4	ISM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	13115	817	13115	-817	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTGGAGAAAAGAAGACAA	NA	NA	NA	NA	NA	NA	NA	NA	13055797	13054700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738
ENSMUSG00000019814.6_13054940_13056661_1	chr10	-	349	4	ISM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	12251	1056	12251	-1056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCGTTCCAAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	13056661	13054939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13055068_13055398_13055452_13055738_13055879_13056633
ENSMUSG00000019814.6_13055004_13056723_1	chr10	-	347	4	ISM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	12189	1120	12189	-1120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAGCAAAGCAGGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	13056723	13055003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13055068_13055398_13055452_13055738_13055879_13056633
ENSMUSG00000019814.6_13055774_13058148_1	chr10	-	359	3	ISM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	10764	1890	10764	-1890	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAAGAGAAGTGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	13058148	13055773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13055879_13056633_13056762_13058022
ENSMUSG00000019814.6_13056715_13058661_1	chr10	-	354	3	ISM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	10251	2831	10251	-2831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGAAGGTACCATTC	NA	NA	NA	NA	NA	NA	NA	NA	13058661	13056714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13056762_13058022_13058273_13058604
ENSMUSG00000019814.6_13058156_13066346_1	chr10	-	369	4	ISM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	2566	4272	2566	-4272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCGCAGGAAGCCATGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	13066346	13058155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13058273_13058604_13058741_13061167_13061256_13066318
ENSMUSG00000019814.6_13058675_13067900_1	chr10	-	374	4	ISM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	1012	4791	1012	-4791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAAACCTCCTTGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	13067900	13058674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13058741_13061167_13061256_13066318_13066490_13067851
ENSMUSG00000019818.16_41395410_41406166_1	chr10	+	2044	6	FSM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	0	878	0	-878	multi-exon	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATTGGAAATAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	41395409	41406166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
ENSMUSG00000019818.16_41395497_41406311_1	chr10	+	2102	6	FSM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	87	733	87	-733	multi-exon	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTCTTTGTCACTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	41395496	41406311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
ENSMUSG00000019818.16_41397911_41406494_1	chr10	+	2088	5	ISM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	2501	550	2501	-550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGTAGCTGTTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	41397910	41406494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
ENSMUSG00000019818.16_41402822_41406621_1	chr10	+	2012	2	ISM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	7412	423	7412	-423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCAGCATATGTAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	41402821	41406621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41402880_41404667
ENSMUSG00000019822.13_41363418_41364747_1	chr10	-	654	6	ISM	ENSMUSG00000019822.13	ENSMUST00000019965.13	1602	10	1589	250	1589	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCAGGGAAGTGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	41364747	41363417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364428_41364512_41364729
ENSMUSG00000019822.13_41363635_41364998_1	chr10	-	674	6	NNC	ENSMUSG00000019822.13	novel	1602	10	NA	NA	1338	-467	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGCCCCGCCTCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	41364998	41363634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_41363822_41363988_41364094_41364172_41364306_41364424_41364512_41364729_41364820_41364926
ENSMUSG00000019822.13_41363755_41365319_1	chr10	-	621	7	ISM	ENSMUSG00000019822.13	ENSMUST00000019965.13	1602	10	1017	587	1017	-587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCCCTTCTCTGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	41365319	41363754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_41363822_41363988_41364094_41364172_41364306_41364428_41364512_41364729_41364820_41364926_41365021_41365270
ENSMUSG00000019822.13_41364027_41365520_1	chr10	-	605	7	ISM	ENSMUSG00000019822.13	ENSMUST00000019965.13	1602	10	816	859	816	-859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTCTGGTATCCGGATT	NA	NA	NA	NA	NA	NA	NA	NA	41365520	41364026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_41364094_41364172_41364306_41364428_41364512_41364729_41364820_41364926_41365021_41365270_41365348_41365459
ENSMUSG00000019822.13_41364172_41366093_1	chr10	-	690	7	ISM	ENSMUSG00000019822.13	ENSMUST00000019965.13	1602	10	243	1004	243	-1004	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGACTGTTTCCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	41366093	41364171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_41364306_41364428_41364512_41364729_41364820_41364926_41365021_41365270_41365348_41365459_41365557_41365978
ENSMUSG00000019823.18_41354101_41358285_1	chr10	+	1468	10	ISM	ENSMUSG00000019823.18	ENST00000358807.8	3242	23	81	4618	81	-4618	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAACAGGCTTGCACGGGC	NA	NA	NA	NA	NA	NA	NA	NA	41354100	41358285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203
ENSMUSG00000019823.18_41354101_41360806_1	chr10	+	2000	15	ISM	ENSMUSG00000019823.18	ENST00000358577.7	2984	22	81	2097	81	-2097	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAACAAAACTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	41354100	41360806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359842_41360160_41360251_41360371_41360529_41360728
ENSMUSG00000019823.18_41354237_41358744_1	chr10	+	1477	11	ISM	ENSMUSG00000019823.18	ENST00000358807.8	3242	23	217	4159	217	-4159	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCCTGCCTCTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	41354236	41358744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599
ENSMUSG00000019823.18_41354237_41361104_1	chr10	+	1987	16	ISM	ENSMUSG00000019823.18	ENST00000358577.7	2984	22	217	1799	217	-1799	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCCTACGGCTGTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	41354236	41361104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359842_41360160_41360251_41360371_41360529_41360728_41360806_41360980
ENSMUSG00000019823.18_41354474_41359627_1	chr10	+	1544	11	ISM	ENSMUSG00000019823.18	ENST00000358807.8	3242	23	454	3276	454	-3276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTGGAGGGTAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	41354473	41359627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436
ENSMUSG00000019823.18_41354474_41361418_1	chr10	+	2038	16	NIC	ENSMUSG00000019823.18	novel	3565	24	NA	NA	454	-1485	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAGGAGGAAGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	41354473	41361418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_41354632_41354958_41355068_41355394_41355496_41355614_41355771_41356280_41356382_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359842_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390
ENSMUSG00000019823.18_41354959_41361876_1	chr10	+	2068	16	NIC	ENSMUSG00000019823.18	novel	3565	24	NA	NA	939	-1027	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1927	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCCCGGGCAAGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	41354958	41361876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_41355068_41355394_41355496_41355614_41355771_41356280_41356382_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359842_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761
ENSMUSG00000019823.18_41355010_41359754_1	chr10	+	1377	11	ISM	ENSMUSG00000019823.18	ENST00000358807.8	3242	23	990	3149	990	-3149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGGCAAACTCCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	41355009	41359754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712
ENSMUSG00000019823.18_41355389_41362118_1	chr10	+	2059	16	ISM	ENSMUSG00000019823.18	ENST00000358577.7	2984	22	1369	785	1369	-785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2063	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAATGTCATTCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	41355388	41362118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41355496_41355614_41355771_41356280_41356382_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359842_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023
ENSMUSG00000019823.18_41355459_41360210_1	chr10	+	1392	11	ISM	ENSMUSG00000019823.18	ENST00000358807.8	3242	23	1439	2693	1439	-2693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCTCCAAACACTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	41355458	41360210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359842_41360160
ENSMUSG00000019823.18_41355635_41360404_1	chr10	+	1408	11	ISM	ENSMUSG00000019823.18	ENST00000358807.8	3242	23	1615	2499	1615	-2499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATCTGTACATCCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	41355634	41360404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359842_41360160_41360251_41360371
ENSMUSG00000019823.18_41355685_41360455_1	chr10	+	1409	11	ISM	ENSMUSG00000019823.18	ENST00000358807.8	3242	23	1665	2448	1665	-2448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGCTGCTTCTGCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	41355684	41360455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359842_41360160_41360251_41360371
ENSMUSG00000019823.18_41355747_41360496_1	chr10	+	1388	11	ISM	ENSMUSG00000019823.18	ENST00000358807.8	3242	23	1727	2407	1727	-2407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGGCTATGGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	41355746	41360496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359842_41360160_41360251_41360371
ENSMUSG00000019823.18_41356278_41360806_1	chr10	+	1477	11	ISM	ENSMUSG00000019823.18	ENST00000358807.8	3242	23	2258	2097	2258	-2097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAACAAAACTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	41356277	41360806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359842_41360160_41360251_41360371_41360529_41360728
ENSMUSG00000019823.18_41356339_41362797_1	chr10	+	1955	17	ISM	ENSMUSG00000019823.18	ENST00000358577.7	2984	22	2319	106	2319	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2768	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGGAAGCTGTTGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	41356338	41362797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41356382_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359842_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ENSMUSG00000019823.18_41357235_41361118_1	chr10	+	1405	11	ISM	ENSMUSG00000019823.18	ENST00000358807.8	3242	23	3215	1785	3215	-1785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCCTGAATATCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	41357234	41361118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359842_41360160_41360251_41360371_41360529_41360728_41360806_41360980
ENSMUSG00000019823.18_41357584_41362904_1	chr10	+	2021	16	ISM	ENSMUSG00000019823.18	ENST00000358577.7	2984	22	3564	-1	3564	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2876	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGGTTAGCTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	41357583	41362904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359842_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ENSMUSG00000019823.18_41361094_41363028_1	chr10	+	916	7	ISM	ENSMUSG00000019823.18	ENST00000358577.7	2984	22	7074	-125	7074	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTATGCTCTGTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	41361093	41363028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ENSMUSG00000019828.14_10564827_10617218_1	chr10	-	1967	5	ISM	ENSMUSG00000019828.14	ENST00000507907.1	3690	9	339096	128	339096	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGGCAGCTCAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	10617218	10564826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_10565612_10573791_10573877_10594966_10595898_10608902_10609030_10617179
ENSMUSG00000019828.14_10564878_10617281_1	chr10	-	1979	5	ISM	ENSMUSG00000019828.14	ENST00000507907.1	3690	9	339033	179	339033	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGGATTCGCCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	10617281	10564877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_10565612_10573791_10573877_10594966_10595898_10608902_10609030_10617179
ENSMUSG00000019828.14_10564958_10617319_1	chr10	-	1937	5	ISM	ENSMUSG00000019828.14	ENST00000507907.1	3690	9	338995	259	338995	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTATGAGCGTGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	10617319	10564957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_10565612_10573791_10573877_10594966_10595898_10608902_10609030_10617179
ENSMUSG00000019828.14_10565192_10622437_1	chr10	-	1881	6	ISM	ENSMUSG00000019828.14	ENST00000507907.1	3690	9	333877	493	333877	-493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCAAGGCGTGGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	10622437	10565191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_10565612_10573791_10573877_10594966_10595898_10608902_10609030_10617179_10617349_10622288
ENSMUSG00000019828.14_10565192_10622539_1	chr10	-	1983	6	ISM	ENSMUSG00000019828.14	ENST00000507907.1	3690	9	333775	493	333775	-493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCAAGGCGTGGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	10622539	10565191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_10565612_10573791_10573877_10594966_10595898_10608902_10609030_10617179_10617349_10622288
ENSMUSG00000019828.14_10565311_10658371_1	chr10	-	1929	7	ISM	ENSMUSG00000019828.14	ENST00000507907.1	3690	9	297943	612	297943	-612	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGCCCTTGTTCCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	10658371	10565310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_10565612_10573791_10573877_10594966_10595898_10608902_10609030_10617179_10617349_10622288_10622536_10658302
ENSMUSG00000019828.14_10565368_10658424_1	chr10	-	1925	7	ISM	ENSMUSG00000019828.14	ENST00000507907.1	3690	9	297890	669	297890	-669	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCGGGCCACCCGTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	10658424	10565367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_10565612_10573791_10573877_10594966_10595898_10608902_10609030_10617179_10617349_10622288_10622536_10658302
ENSMUSG00000019828.14_10565498_10812095_1	chr10	-	1932	8	ISM	ENSMUSG00000019828.14	ENST00000507907.1	3690	9	144219	799	144219	-799	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGGCTCTGGCAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	10812095	10565497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_10565612_10573791_10573877_10594966_10595898_10608902_10609030_10617179_10617349_10622288_10622536_10658302_10658539_10812072
ENSMUSG00000019828.14_10565562_10812151_1	chr10	-	1924	8	ISM	ENSMUSG00000019828.14	ENST00000507907.1	3690	9	144163	863	144163	-863	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGTGAAGACCAATGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	10812151	10565561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_10565612_10573791_10573877_10594966_10595898_10608902_10609030_10617179_10617349_10622288_10622536_10658302_10658539_10812072
ENSMUSG00000019828.14_10565594_10812225_1	chr10	-	1966	8	ISM	ENSMUSG00000019828.14	ENST00000507907.1	3690	9	144089	895	144089	-895	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGACAGCATGTGTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	10812225	10565593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_10565612_10573791_10573877_10594966_10595898_10608902_10609030_10617179_10617349_10622288_10622536_10658302_10658539_10812072
ENSMUSG00000019828.14_10595110_10955696_1	chr10	-	1931	7	ISM	ENSMUSG00000019828.14	ENST00000507907.1	3690	9	618	30411	618	-30411	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAACCCGAGAGGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	10955696	10595109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_10595898_10608902_10609030_10617179_10617349_10622288_10622536_10658302_10658539_10812072_10812323_10955582
ENSMUSG00000019828.14_10595279_10955912_1	chr10	-	1978	7	ISM	ENSMUSG00000019828.14	ENST00000507907.1	3690	9	402	30580	402	-30580	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTAAATACATCGCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	10955912	10595278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_10595898_10608902_10609030_10617179_10617349_10622288_10622536_10658302_10658539_10812072_10812323_10955582
ENSMUSG00000019828.14_10595378_10955977_1	chr10	-	1944	7	ISM	ENSMUSG00000019828.14	ENST00000507907.1	3690	9	337	30679	337	-30679	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTGTAGTGGCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	10955977	10595377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_10595898_10608902_10609030_10617179_10617349_10622288_10622536_10658302_10658539_10812072_10812323_10955582
ENSMUSG00000019831.15_40796289_40802514_1	chr10	+	151	2	ISM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	36466	12052	36466	-12047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGCACACAGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	40796288	40802514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_40796405_40802479
ENSMUSG00000019831.15_40796290_40814296_1	chr10	+	2159	8	ISM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	36467	270	36467	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1612	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAATACACTCAGAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	40796289	40814296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105_40812735_40813641
ENSMUSG00000019831.15_40802480_40806658_1	chr10	+	167	2	ISM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	42657	7908	42657	-7903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGGAGCTCCACAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	40802479	40806658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_40802615_40806626
ENSMUSG00000019831.15_40810565_40812191_1	chr10	+	174	2	ISM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	50742	2375	50742	-2370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCCACCTCTTCCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	40810564	40812191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_40810653_40812105
ENSMUSG00000019831.15_40812711_40813793_1	chr10	+	176	2	ISM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	52888	773	52888	-768	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTAAGAAAGCCACAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	40812710	40813793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_40812735_40813641
ENSMUSG00000019831.15_40813668_40813880_1	chr10	+	158	2	ISM	ENSMUSG00000019831.15	ENST00000392588.5	3106	11	54154	681	53845	-681	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAAGGCTGAATGCACATG	NA	NA	NA	NA	NA	NA	NA	NA	40813667	40813880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_40813810_40813864
ENSMUSG00000019831.15_40813714_40813942_1	chr10	+	174	2	ISM	ENSMUSG00000019831.15	ENST00000392588.5	3106	11	54200	619	53891	-619	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTGCTTCCTATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	40813713	40813942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_40813810_40813864
ENSMUSG00000019831.15_40813772_40813988_1	chr10	+	162	2	ISM	ENSMUSG00000019831.15	ENST00000392588.5	3106	11	54258	573	53949	-573	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTGATTTCTATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	40813771	40813988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_40813810_40813864
ENSMUSG00000019832.6_10422065_10433681_1	chr10	-	502	3	FSM	ENSMUSG00000019832.6	ENSMUST00000019974.5	2149	3	328	1319	328	-1319	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCCCAGTGCTGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	10433681	10422064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_10422196_10426422_10426701_10433588
ENSMUSG00000019832.6_10426523_10433925_1	chr10	-	515	2	ISM	ENSMUSG00000019832.6	ENSMUST00000019974.5	2149	3	84	5777	84	-5777	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGTGACCAGAAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	10433925	10426522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_10426701_10433588
ENSMUSG00000019842.7_39502123_39510727_1	chr10	+	730	2	ISM	ENSMUSG00000019842.7	ENST00000359831.8	1682	8	279	19799	279	-19799	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	885	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTAAGACACCCTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	39502122	39510727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_39502656_39510530
ENSMUSG00000019842.7_39502514_39522872_1	chr10	+	700	6	ISM	ENSMUSG00000019842.7	ENST00000359831.8	1682	8	670	7654	670	-7654	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCCAAATACAAACAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	39502513	39522872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_39502656_39510530_39510727_39515215_39515395_39517301_39517391_39521703_39521773_39522847
ENSMUSG00000019842.7_39502549_39522938_1	chr10	+	731	6	ISM	ENSMUSG00000019842.7	ENST00000359831.8	1682	8	705	7588	705	-7588	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTAAGTACATTCATCGG	NA	NA	NA	NA	NA	NA	NA	NA	39502548	39522938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_39502656_39510530_39510727_39515215_39515395_39517301_39517391_39521703_39521773_39522847
ENSMUSG00000019842.7_39502591_39526939_1	chr10	+	750	7	ISM	ENSMUSG00000019842.7	ENST00000359831.8	1682	8	747	3587	747	-3587	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	689	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATTCATCCCTGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	39502590	39526939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_39502656_39510530_39510727_39515215_39515395_39517301_39517391_39521703_39521773_39522847_39522962_39526901
ENSMUSG00000019842.7_39510573_39530406_1	chr10	+	708	7	ISM	ENSMUSG00000019842.7	ENST00000359831.8	1682	8	8729	120	8729	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTTACAGCTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	39510572	39530406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_39510727_39515215_39515395_39517301_39517391_39521703_39521773_39522847_39522962_39526901_39526977_39530378
ENSMUSG00000019842.7_39510625_39530455_1	chr10	+	705	7	ISM	ENSMUSG00000019842.7	ENST00000359831.8	1682	8	8781	71	8781	-71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAGGGAGGAAGAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	39510624	39530455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_39510727_39515215_39515395_39517301_39517391_39521703_39521773_39522847_39522962_39526901_39526977_39530378
ENSMUSG00000019842.7_39510682_39530500_1	chr10	+	693	7	ISM	ENSMUSG00000019842.7	ENST00000359831.8	1682	8	8838	26	8838	-26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTCAGGTGGTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	39510681	39530500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_39510727_39515215_39515395_39517301_39517391_39521703_39521773_39522847_39522962_39526901_39526977_39530378
ENSMUSG00000019842.7_39515215_39530526_1	chr10	+	678	6	ISM	ENSMUSG00000019842.7	ENST00000392556.8	1685	8	13371	0	13371	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCACTCCAGCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	39515214	39530526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
ENSMUSG00000019846.12_38841511_38921785_1	chr10	+	1608	11	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	120	64246	0	-64246	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATGAGGAGGCAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	38841510	38921785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38841729_38841865_38842146_38881407_38881510_38886993_38887119_38893316_38893398_38902530_38902746_38904617_38904693_38906428_38906581_38909006_38909118_38918576_38918689_38921648
ENSMUSG00000019846.12_38841668_38924123_1	chr10	+	1676	12	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	277	61908	157	-61908	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGTGGGCAGCAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	38841667	38924123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38841729_38841865_38842146_38881407_38881510_38886993_38887119_38893316_38893398_38902530_38902746_38904617_38904693_38906428_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929
ENSMUSG00000019846.12_38841934_38932861_1	chr10	+	1753	13	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	543	53170	423	-53170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCAGGAAGCTACGGACC	NA	NA	NA	NA	NA	NA	NA	NA	38841933	38932861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38842146_38881407_38881510_38886993_38887119_38893316_38893398_38902530_38902746_38904617_38904693_38906428_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772
ENSMUSG00000019846.12_38881406_38936264_1	chr10	+	1745	13	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	40015	49767	39895	-49767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACTACTTTATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	38881405	38936264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38881510_38886993_38887119_38893316_38893398_38902530_38902746_38904617_38904693_38906428_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122
ENSMUSG00000019846.12_38886993_38937446_1	chr10	+	1739	13	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	45602	48585	45482	-48585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATATCTCTTTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	38886992	38937446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38887119_38893316_38893398_38902530_38902746_38904617_38904693_38906428_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349
ENSMUSG00000019846.12_38893317_38941716_1	chr10	+	1730	13	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	51926	44315	51806	-44315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGATCCAGAGCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	38893316	38941716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38893398_38902530_38902746_38904617_38904693_38906428_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349_38937447_38941599
ENSMUSG00000019846.12_38902553_38943963_1	chr10	+	1740	13	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	61162	42068	61042	-42068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGAACCTGCAGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	38902552	38943963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38902746_38904617_38904693_38906428_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349_38937447_38941599_38941717_38943850
ENSMUSG00000019846.12_38902649_38943993_1	chr10	+	1674	13	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	61258	42038	61138	-42038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATATAACACTGCAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	38902648	38943993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38902746_38904617_38904693_38906428_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349_38937447_38941599_38941717_38943850
ENSMUSG00000019846.12_38906431_38948725_1	chr10	+	1692	13	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	65040	37306	64920	-37306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGATGGCCAGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	38906430	38948725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349_38937447_38941599_38941717_38943850_38944031_38945950_38946091_38948710
ENSMUSG00000019846.12_38906504_38948782_1	chr10	+	1676	13	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	65113	37249	64993	-37249	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCCTTCACATCCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	38906503	38948782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349_38937447_38941599_38941717_38943850_38944031_38945950_38946091_38948710
ENSMUSG00000019846.12_38918575_38949706_1	chr10	+	1744	12	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	77184	36325	77064	-36325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGGGAATCCAATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	38918574	38949706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349_38937447_38941599_38941717_38943850_38944031_38945950_38946091_38948710_38948891_38949560
ENSMUSG00000019846.12_38921643_38950140_1	chr10	+	1656	12	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	80252	35891	80132	-35891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTGACAGTCCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	38921642	38950140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349_38937447_38941599_38941717_38943850_38944031_38945950_38946091_38948710_38948891_38949560_38949707_38950120
ENSMUSG00000019846.12_38921735_38950252_1	chr10	+	1676	12	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	80344	35779	80224	-35779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACGTTGGTGGGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	38921734	38950252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349_38937447_38941599_38941717_38943850_38944031_38945950_38946091_38948710_38948891_38949560_38949707_38950120
ENSMUSG00000019846.12_38924035_38951411_1	chr10	+	1714	13	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	82644	34620	82524	-34620	internal_fragment	TRUE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGGTGAGGGACATCA	NA	NA	NA	NA	NA	NA	NA	NA	38924034	38951411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349_38937447_38941599_38941717_38943850_38944031_38945950_38946091_38948710_38948891_38949560_38949707_38950120_38950284_38950659_38950794_38951351
ENSMUSG00000019846.12_38932799_38954799_1	chr10	+	1678	12	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	91408	31232	91288	-31232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGACACGTTGAAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	38932798	38954799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38932922_38936122_38936265_38937349_38937447_38941599_38941717_38943850_38944031_38945950_38946091_38948710_38948891_38949560_38949707_38950120_38950284_38950659_38950794_38951351_38951524_38954715
ENSMUSG00000019846.12_38936152_38956593_1	chr10	+	1690	12	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	94761	29438	94641	-29438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGCCCCAAGAAGTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	38936151	38956593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38936265_38937349_38937447_38941599_38941717_38943850_38944031_38945950_38946091_38948710_38948891_38949560_38949707_38950120_38950284_38950659_38950794_38951351_38951524_38954715_38954848_38956477
ENSMUSG00000019846.12_38937386_38958829_1	chr10	+	1674	12	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	95995	27202	95875	-27202	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTGGTTATGGATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	38937385	38958829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38937447_38941599_38941717_38943850_38944031_38945950_38946091_38948710_38948891_38949560_38949707_38950120_38950284_38950659_38950794_38951351_38951524_38954715_38954848_38956477_38956621_38958723
ENSMUSG00000019846.12_38941655_38959352_1	chr10	+	1679	12	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	100264	26679	100144	-26679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCCGAACATTACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	38941654	38959352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38941717_38943850_38944031_38945950_38946091_38948710_38948891_38949560_38949707_38950120_38950284_38950659_38950794_38951351_38951524_38954715_38954848_38956477_38956621_38958723_38958863_38959264
ENSMUSG00000019846.12_38943886_38963335_1	chr10	+	1719	12	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	102495	22696	102375	-22696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGATGGGCTGCCCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	38943885	38963335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38944031_38945950_38946091_38948710_38948891_38949560_38949707_38950120_38950284_38950659_38950794_38951351_38951524_38954715_38954848_38956477_38956621_38958723_38958863_38959264_38959403_38963248
ENSMUSG00000019846.12_38946040_38964428_1	chr10	+	1678	12	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	104649	21603	104529	-21603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGCCTACTTTACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	38946039	38964428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38946091_38948710_38948891_38949560_38949707_38950120_38950284_38950659_38950794_38951351_38951524_38954715_38954848_38956477_38956621_38958723_38958863_38959264_38959403_38963248_38963383_38964282
ENSMUSG00000019846.12_38948774_38964849_1	chr10	+	1678	12	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	107383	21182	107263	-21182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTCCTTCACAAAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	38948773	38964849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38948891_38949560_38949707_38950120_38950284_38950659_38950794_38951351_38951524_38954715_38954848_38956477_38956621_38958723_38958863_38959264_38959403_38963248_38963383_38964282_38964448_38964754
ENSMUSG00000019846.12_38949561_38968266_1	chr10	+	1755	12	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	108170	17765	108050	-17765	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCGCCAGGAGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	38949560	38968266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38949707_38950120_38950284_38950659_38950794_38951351_38951524_38954715_38954848_38956477_38956621_38958723_38958863_38959264_38959403_38963248_38963383_38964282_38964448_38964754_38964903_38968125
ENSMUSG00000019846.12_38950119_38970918_1	chr10	+	1686	12	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	108728	15113	108608	-15113	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTCCTCACATGGGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	38950118	38970918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38950284_38950659_38950794_38951351_38951524_38954715_38954848_38956477_38956621_38958723_38958863_38959264_38959403_38963248_38963383_38964282_38964448_38964754_38964903_38968125_38968314_38970890
ENSMUSG00000019846.12_38950225_38971035_1	chr10	+	1697	12	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	108834	14996	108714	-14996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATTAGAAGCCAGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	38950224	38971035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38950284_38950659_38950794_38951351_38951524_38954715_38954848_38956477_38956621_38958723_38958863_38959264_38959403_38963248_38963383_38964282_38964448_38964754_38964903_38968125_38968314_38970890
ENSMUSG00000019846.12_38951446_38974388_1	chr10	+	1677	12	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	110055	11643	109935	-11643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGCTTCTCAAACGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	38951445	38974388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38951524_38954715_38954848_38956477_38956621_38958723_38958863_38959264_38959403_38963248_38963383_38964282_38964448_38964754_38964903_38968125_38968314_38970890_38971081_38973078_38973235_38974322
ENSMUSG00000019846.12_38956531_38981177_1	chr10	+	1684	12	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	115140	4854	115020	-4854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACTCCCAAGCAGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	38956530	38981177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38956621_38958723_38958863_38959264_38959403_38963248_38963383_38964282_38964448_38964754_38964903_38968125_38968314_38970890_38971081_38973078_38973235_38974322_38974483_38979483_38979615_38981132
ENSMUSG00000019846.12_38958784_38982040_1	chr10	+	1666	12	ISM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	117393	3991	117273	-3991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACAGGGAGCCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	38958783	38982040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38958863_38959264_38959403_38963248_38963383_38964282_38964448_38964754_38964903_38968125_38968314_38970890_38971081_38973078_38973235_38974322_38974483_38979483_38979615_38981132_38981227_38981957
ENSMUSG00000019846.12_38959327_38986093_1	chr10	+	1772	12	ISM	ENSMUSG00000019846.12	ENSMUST00000019992.6	6046	38	117816	91	117816	62	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGGGTCAGAGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	38959326	38986093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_38959403_38963248_38963383_38964282_38964448_38964754_38964903_38968125_38968314_38970890_38971081_38973078_38973235_38974322_38974483_38979483_38979615_38981132_38981227_38981957_38982078_38985883
ENSMUSG00000019848.15_45165401_45190849_1	chr10	+	464	2	ISM	ENSMUSG00000019848.15	ENSMUST00000161803.2	1369	4	-97	3364	0	-3364	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTCTAAAGCGAACTGAC	NA	NA	NA	NA	NA	NA	NA	NA	45165400	45190849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45165672_45190656
ENSMUSG00000019848.15_45191040_45194047_1	chr10	+	646	3	ISM	ENSMUSG00000019848.15	ENSMUST00000161803.2	1369	4	25542	166	25542	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTCCAGACAACATTGT	NA	NA	NA	NA	NA	NA	NA	NA	45191039	45194047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45191376_45192578_45192636_45193794
ENSMUSG00000019848.15_45191096_45192639_1	chr10	+	393	2	ISM	ENSMUSG00000019848.15	ENSMUST00000019994.14	1853	4	25695	1909	25598	-1574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCAATTATGCTGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	45191095	45192639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45191376_45192526
ENSMUSG00000019848.15_45191281_45194047_2	chr10	+	457	3	ISM	ENSMUSG00000019848.15	ENSMUST00000019994.14	1853	4	25880	501	25783	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTCCAGACAACATTGT	NA	NA	NA	NA	NA	NA	NA	NA	45191280	45194047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45191376_45192526_45192636_45193794
ENSMUSG00000019849.12_44943299_45002117_1	chr10	+	1399	10	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	0	41177	0	-41177	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACGGTGAAGGGAATCG	NA	NA	NA	NA	NA	NA	NA	NA	44943298	45002117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059
ENSMUSG00000019849.12_44948149_45024217_1	chr10	+	1409	10	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	4850	19077	4850	-19077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCATGAGACACCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	44948148	45024217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080
ENSMUSG00000019849.12_44968757_45029282_1	chr10	+	1428	10	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	25458	14012	25458	-14012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACCTGCGTCTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	44968756	45029282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150
ENSMUSG00000019849.12_44971139_45031748_1	chr10	+	1371	10	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	27840	11546	27840	-11546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTGAATGGCTTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	44971138	45031748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611
ENSMUSG00000019849.12_44973532_45034458_1	chr10	+	1331	10	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	30233	8836	30233	-8836	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACATCGTGGGCCGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	44973531	45034458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ENSMUSG00000019849.12_44973587_45034506_1	chr10	+	1324	10	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	30288	8788	30288	-8788	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGGACACCAAGGCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	44973586	45034506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ENSMUSG00000019849.12_44983949_45034624_1	chr10	+	1337	9	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	40650	8670	40650	-8670	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTTCCAGTTCCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	44983948	45034624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ENSMUSG00000019849.12_44991274_45034763_1	chr10	+	1336	8	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	47975	8531	47975	-8531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACGGGGATTTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	44991273	45034763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ENSMUSG00000019849.12_44996762_45034878_1	chr10	+	1351	7	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	53463	8416	53463	-8416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCATGTTTGTATAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	44996761	45034878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ENSMUSG00000019849.12_44996851_45034944_1	chr10	+	1328	7	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	53552	8350	53552	-8350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGGATCTAATAAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	44996850	45034944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ENSMUSG00000019849.12_45002145_45035140_1	chr10	+	1353	6	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	58846	8154	58846	-8154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTATCAGAATAAAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	45002144	45035140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ENSMUSG00000019849.12_45029198_45035410_1	chr10	+	1325	3	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	85899	7884	85899	-7884	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGCCTGTGATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	45029197	45035410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45029283_45031611_45031769_45034327
ENSMUSG00000019853.7_18415246_18420195_1	chr10	-	2018	2	ISM	ENSMUSG00000019853.7	ENSMUST00000020000.7	2535	4	1629	0	1440	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGGTTCTTGGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	18420195	18415245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_18417081_18420012
ENSMUSG00000019853.7_18415409_18420927_1	chr10	-	1955	3	ISM	ENSMUSG00000019853.7	ENSMUST00000020000.7	2535	4	897	163	708	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACGGTCGTTTTTAATAC	NA	NA	NA	NA	NA	NA	NA	NA	18420927	18415408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_18417081_18420012_18420194_18420825
ENSMUSG00000019853.7_18415519_18420961_1	chr10	-	1879	3	ISM	ENSMUSG00000019853.7	ENSMUST00000020000.7	2535	4	863	273	674	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTTGGGTAACTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	18420961	18415518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_18417081_18420012_18420194_18420825
ENSMUSG00000019853.7_18415708_18421715_1	chr10	-	1964	4	FSM	ENSMUSG00000019853.7	ENSMUST00000020000.7	2535	4	109	462	-80	-462	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTCATTCAACCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	18421715	18415707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_18417081_18420012_18420194_18420825_18420962_18421441
ENSMUSG00000019857.8_53482252_53483784_1	chr10	+	154	2	ISM	ENSMUSG00000019857.8	ENSMUST00000219282.2	1150	4	8399	484	8399	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCCAGAGTCACAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	53482251	53483784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_53482382_53483760
ENSMUSG00000019863.8_43761067_43770609_1	chr10	-	292	3	ISM	ENSMUSG00000019863.8	ENST00000400977.3	1474	10	1555	10531	1555	-10531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGATTGTTGGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	43770609	43761066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_43761115_43764987_43765133_43770510
ENSMUSG00000019868.17_14531099_14543742_1	chr10	-	645	3	ISM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	37562	600	19710	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGATTACCAGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	14543742	14531098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_14531590_14536809_14536897_14543675
ENSMUSG00000019868.17_14531099_14543742_2	chr10	-	558	2	ISM	ENSMUSG00000019868.17	ENST00000620996.4	1095	6	19710	19	19710	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGATTACCAGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	14543742	14531098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_14531590_14543675
ENSMUSG00000019868.17_14531099_14543852_1	chr10	-	755	3	ISM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	37452	600	19600	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGATTACCAGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	14543852	14531098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_14531590_14536809_14536897_14543675
ENSMUSG00000019868.17_14531200_14543742_1	chr10	-	457	2	ISM	ENSMUSG00000019868.17	ENST00000620996.4	1095	6	19710	120	19710	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTTAATTTATACACAC	NA	NA	NA	NA	NA	NA	NA	NA	14543742	14531199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_14531590_14543675
ENSMUSG00000019868.17_14531200_14551786_1	chr10	-	763	4	ISM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	29518	701	11666	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	985	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTTAATTTATACACAC	NA	NA	NA	NA	NA	NA	NA	NA	14551786	14531199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677
ENSMUSG00000019868.17_14531407_14551786_1	chr10	-	469	3	ISM	ENSMUSG00000019868.17	ENST00000620996.4	1095	6	11666	327	11666	-327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTAACAGTCCGTTACAC	NA	NA	NA	NA	NA	NA	NA	NA	14551786	14531406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_14531590_14543675_14543853_14551677
ENSMUSG00000019868.17_14531407_14559883_1	chr10	-	632	5	ISM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	21421	908	3569	-327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTAACAGTCCGTTACAC	NA	NA	NA	NA	NA	NA	NA	NA	14559883	14531406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807
ENSMUSG00000019868.17_14531532_14560676_1	chr10	-	472	5	ISM	ENSMUSG00000019868.17	ENST00000620996.4	1095	6	2776	452	2776	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGTGCCCTGCAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	14560676	14531531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_14531590_14543675_14543853_14551677_14551787_14559807_14559884_14560624
ENSMUSG00000019868.17_14531532_14563452_1	chr10	-	730	7	ISM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	17852	1033	0	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGTGCCCTGCAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	14563452	14531531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357
ENSMUSG00000019868.17_14536809_14581203_1	chr10	-	783	7	ISM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	101	6310	101	-5729	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCAGCTGGCTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	14581203	14536808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
ENSMUSG00000019877.11_57393150_57395524_1	chr10	-	305	2	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	13102	1280	13102	-1280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTCTCTTGCATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	57395524	57393149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_57393389_57395458
ENSMUSG00000019877.11_57393199_57395579_1	chr10	-	311	2	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	13047	1329	13047	-1329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCCCAATTTTTGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	57395579	57393198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_57393389_57395458
ENSMUSG00000019877.11_57393272_57395645_1	chr10	-	304	2	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	12981	1402	12981	-1402	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGGGATTTTGACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	57395645	57393271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_57393389_57395458
ENSMUSG00000019877.11_57393355_57395853_1	chr10	-	325	3	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	12773	1485	12773	-1485	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAGTCTGGGTGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	57395853	57393354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_57393389_57395458_57395690_57395793
ENSMUSG00000019877.11_57395561_57399088_1	chr10	-	311	3	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	9538	3691	9538	-3691	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAACGAGAGGGATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	57399088	57395560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_57395690_57395793_57395939_57399051
ENSMUSG00000019877.11_57395600_57399157_1	chr10	-	341	3	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	9469	3730	9469	-3730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGATCACTAGATGATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	57399157	57395599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_57395690_57395793_57395939_57399051
ENSMUSG00000019877.11_57395658_57399203_1	chr10	-	329	3	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	9423	3788	9423	-3788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGACTCTAACAAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	57399203	57395657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_57395690_57395793_57395939_57399051
ENSMUSG00000019877.11_57395863_57400077_1	chr10	-	358	3	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	8549	3993	8549	-3993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCAGTGGTGGCATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	57400077	57395862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_57395939_57399051_57399313_57400056
ENSMUSG00000019877.11_57399131_57400195_1	chr10	-	321	2	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	8431	7261	8431	-7261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGGCTTGTTACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	57400195	57399130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_57399313_57400056
ENSMUSG00000019877.11_57399280_57400495_1	chr10	-	251	3	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	8131	7410	8131	-7410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTAGTTGCCGTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	57400495	57399279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_57399313_57400056_57400195_57400415
ENSMUSG00000019877.11_57400145_57403787_1	chr10	-	327	4	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	4839	8275	4839	-8275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCTTACTTATTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	57403787	57400144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_57400195_57400415_57400496_57401420_57401591_57403760
ENSMUSG00000019877.11_57403761_57408626_1	chr10	-	336	2	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	0	11891	0	-11891	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCTTTTGTTTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	57408626	57403760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_57403923_57408452
ENSMUSG00000019883.12_29189496_29222209_1	chr10	+	2600	6	FSM	ENSMUSG00000019883.12	ENSMUST00000020034.6	3856	6	0	1256	0	653	multi-exon	FALSE	canonical	NA	NA	NA	NA	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATCAAAAAGAAAAATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	29189495	29222209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_29189730_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
ENSMUSG00000019883.12_29189659_29222262_1	chr10	+	2490	6	FSM	ENSMUSG00000019883.12	ENSMUST00000020034.6	3856	6	163	1203	163	706	multi-exon	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAATCTTATGGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	29189658	29222262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_29189730_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
ENSMUSG00000019883.12_29189659_29222311_1	chr10	+	2539	6	FSM	ENSMUSG00000019883.12	ENSMUST00000020034.6	3856	6	163	1154	163	755	multi-exon	FALSE	canonical	NA	NA	NA	NA	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATTAGCTGCAGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	29189658	29222311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_29189730_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
ENSMUSG00000019883.12_29193540_29222421_1	chr10	+	2541	5	ISM	ENSMUSG00000019883.12	ENSMUST00000020034.6	3856	6	4044	1044	39	865	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCTCACAGGTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	29193539	29222421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
ENSMUSG00000019883.12_29193615_29222498_1	chr10	+	2543	5	ISM	ENSMUSG00000019883.12	ENSMUST00000020034.6	3856	6	4119	967	114	942	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAGGACCATTAATGCAC	NA	NA	NA	NA	NA	NA	NA	NA	29193614	29222498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
ENSMUSG00000019883.12_29193661_29222557_1	chr10	+	2556	5	ISM	ENSMUSG00000019883.12	ENSMUST00000020034.6	3856	6	4165	908	160	-908	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACACTATAAACAGATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	29193660	29222557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
ENSMUSG00000019883.12_29198342_29220732_1	chr10	+	602	4	ISM	ENSMUSG00000019883.12	ENSMUST00000160399.8	1845	6	9180	824	72	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATACTAAATAGCCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	29198341	29220732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_29198414_29207814_29207868_29210186_29210268_29220336
ENSMUSG00000019883.12_29198342_29220732_2	chr10	+	595	4	NNC	ENSMUSG00000019883.12	novel	672	4	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATACTAAATAGCCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	29198341	29220732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_29198414_29207821_29207868_29210186_29210268_29220336
ENSMUSG00000019894.15_103203704_103255383_1	chr10	+	2873	8	FSM	ENSMUSG00000019894.15	ENST00000680892.1	2778	8	-88	-7	0	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACAGGGAGGAGAACACT	NA	NA	NA	NA	NA	NA	NA	NA	103203703	103255383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_103204015_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ENSMUSG00000019894.15_103203854_103224910_1	chr10	+	314	2	ISM	ENSMUSG00000019894.15	ENST00000680714.1	1020	4	62	6165	62	-6165	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATGCCTAAGAATAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	103203853	103224910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_103204015_103224757
ENSMUSG00000019894.15_103203913_103224999_1	chr10	+	344	2	ISM	ENSMUSG00000019894.15	ENST00000680714.1	1020	4	121	6076	121	-6076	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGAAGAGGTTTCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	103203912	103224999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_103204015_103224757
ENSMUSG00000019894.15_103203945_103252548_1	chr10	+	1936	11	ISM	ENSMUSG00000019894.15	ENST00000266682.10	3690	12	153	2828	153	-2688	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTGGAAATACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	103203944	103252548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_103204015_103224757_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493
ENSMUSG00000019894.15_103203971_103225044_1	chr10	+	331	2	ISM	ENSMUSG00000019894.15	ENST00000680714.1	1020	4	179	6031	179	-6031	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAGAAAGATACAGATG	NA	NA	NA	NA	NA	NA	NA	NA	103203970	103225044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_103204015_103224757
ENSMUSG00000019894.15_103224881_103253967_1	chr10	+	1935	11	ISM	ENSMUSG00000019894.15	ENSMUST00000074204.12	3607	13	21177	1271	21089	-1269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTTCATCATTCGTCG	NA	NA	NA	NA	NA	NA	NA	NA	103224880	103253967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ENSMUSG00000019894.15_103224927_103254030_1	chr10	+	1952	11	ISM	ENSMUSG00000019894.15	ENSMUST00000074204.12	3607	13	21223	1208	21135	-1206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTATAAGAGAGGAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	103224926	103254030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ENSMUSG00000019894.15_103224973_103229846_1	chr10	+	315	2	ISM	ENSMUSG00000019894.15	ENST00000680714.1	1020	4	21181	1229	21181	-1229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGATCAATGCCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	103224972	103229846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_103225203_103229761
ENSMUSG00000019894.15_103224999_103254087_1	chr10	+	1937	11	ISM	ENSMUSG00000019894.15	ENSMUST00000074204.12	3607	13	21295	1151	21207	-1149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTCATTCATGGAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	103224998	103254087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ENSMUSG00000019894.15_103225079_103230970_1	chr10	+	371	3	ISM	ENSMUSG00000019894.15	ENST00000680714.1	1020	4	21287	105	21287	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGCCTGGGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	103225078	103230970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_103225203_103229761_103229889_103230850
ENSMUSG00000019894.15_103229311_103254273_1	chr10	+	1860	10	ISM	ENSMUSG00000019894.15	ENSMUST00000074204.12	3607	13	25607	965	25519	-963	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGTTAATTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	103229310	103254273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ENSMUSG00000019894.15_103229311_103254323_1	chr10	+	1910	10	ISM	ENSMUSG00000019894.15	ENSMUST00000074204.12	3607	13	25607	915	25519	-913	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCTTCACTATCACACG	NA	NA	NA	NA	NA	NA	NA	NA	103229310	103254323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ENSMUSG00000019894.15_103229311_103254385_1	chr10	+	1972	10	ISM	ENSMUSG00000019894.15	ENSMUST00000074204.12	3607	13	25607	853	25519	-851	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGACAGTTCAAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	103229310	103254385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ENSMUSG00000019894.15_103229761_103231076_1	chr10	+	354	2	ISM	ENSMUSG00000019894.15	ENST00000680714.1	1020	4	25969	-1	25969	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTACTGTCAATTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	103229760	103231076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_103229889_103230850
ENSMUSG00000019894.15_103229783_103254498_1	chr10	+	1965	9	ISM	ENSMUSG00000019894.15	ENSMUST00000074204.12	3607	13	26079	740	25991	-738	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTGGCATATTTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	103229782	103254498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ENSMUSG00000019894.15_103229847_103254539_1	chr10	+	1942	9	ISM	ENSMUSG00000019894.15	ENSMUST00000074204.12	3607	13	26143	699	26055	-697	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTACCTCAGTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	103229846	103254539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ENSMUSG00000019894.15_103230938_103254661_1	chr10	+	1935	8	ISM	ENSMUSG00000019894.15	ENSMUST00000074204.12	3607	13	27234	577	27146	-575	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGAGCCGGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	103230937	103254661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ENSMUSG00000019894.15_103230989_103254713_1	chr10	+	1936	8	ISM	ENSMUSG00000019894.15	ENSMUST00000074204.12	3607	13	27285	525	27197	-523	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTACTTAATTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	103230988	103254713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ENSMUSG00000019897.9_105677365_105683694_2	chr10	+	1376	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	437	0	437	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTGTAATAGAAGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	105677364	105683694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
ENSMUSG00000019916.15_59159190_59188081_1	chr10	+	1213	8	ISM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	0	19992	0	-19697	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTTTTTCTTCTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	59159189	59188081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904
ENSMUSG00000019916.15_59172935_59197734_1	chr10	+	1168	9	ISM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	13817	11392	13745	-10044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAGATCTCACAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	59172934	59197734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59190161_59190233_59197682
ENSMUSG00000019916.15_59178506_59197782_1	chr10	+	1075	7	ISM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	19316	10291	19316	-9996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAGCCAGTGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	59178505	59197782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682
ENSMUSG00000019916.15_59178506_59203176_1	chr10	+	1195	9	ISM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	19388	5950	19316	-4602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAACAGCTAAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	59178505	59203176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110
ENSMUSG00000019916.15_59178623_59205131_1	chr10	+	1147	10	ISM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	19505	3995	19433	-2647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATGGCTTGTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	59178622	59205131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062
ENSMUSG00000019916.15_59179546_59206846_1	chr10	+	1163	11	ISM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	20428	2280	20356	-932	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGTGGACAAGAATTTCGA	NA	NA	NA	NA	NA	NA	NA	NA	59179545	59206846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUSG00000019916.15_59179574_59205113_1	chr10	+	999	9	ISM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	20384	2960	20384	-2665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTTTGGCCCAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	59179573	59205113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062
ENSMUSG00000019916.15_59184001_59205505_1	chr10	+	1073	9	ISM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	24811	2568	24811	-2273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTTCCTCTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	59184000	59205505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408
ENSMUSG00000019916.15_59184139_59206916_1	chr10	+	1026	10	ISM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	24949	1157	24949	-862	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTCCTCTAACGCAC	NA	NA	NA	NA	NA	NA	NA	NA	59184138	59206916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUSG00000019916.15_59184207_59206965_1	chr10	+	1007	10	ISM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	25017	1108	25017	-813	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTACAGCTGACTAACACT	NA	NA	NA	NA	NA	NA	NA	NA	59184206	59206965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUSG00000019916.15_59186274_59207196_1	chr10	+	1154	9	ISM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	27156	1930	27084	-582	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATTTCACCACAAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	59186273	59207196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59186423_59187904_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUSG00000019916.15_59186341_59207262_1	chr10	+	1153	9	ISM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	27223	1864	27151	-516	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAGCAGAGCCTGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	59186340	59207262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59186423_59187904_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUSG00000019916.15_59186396_59207315_1	chr10	+	1151	9	ISM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	27278	1811	27206	-463	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTCCGATGTGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	59186395	59207315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59186423_59187904_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUSG00000019916.15_59187944_59207232_1	chr10	+	1002	8	ISM	ENSMUSG00000019916.15	ENSMUST00000092512.11	2387	14	28758	546	28754	-546	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGCTGTGTGGCAGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	59187943	59207232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUSG00000019916.15_59188008_59207280_1	chr10	+	986	8	ISM	ENSMUSG00000019916.15	ENSMUST00000092512.11	2387	14	28822	498	28818	-498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTACAGACGGCAGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	59188007	59207280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUSG00000019916.15_59188019_59207447_1	chr10	+	1142	8	ISM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	28901	1679	28829	-331	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAGCCAGTTTGAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	59188018	59207447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUSG00000019916.15_59188047_59207527_1	chr10	+	1194	8	ISM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	28929	1599	28857	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTCAGTGACTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	59188046	59207527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUSG00000019916.15_59201108_59207778_1	chr10	+	1242	5	ISM	ENSMUSG00000019916.15	ENSMUST00000092512.11	2387	14	41922	0	41918	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTCTGTGTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	59201107	59207778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUSG00000019917.11_58977449_59028183_1	chr10	-	1246	8	ISM	ENSMUSG00000019917.11	ENSMUST00000220156.2	1821	10	29486	0	29486	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATTTTGCTCTTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	59028183	58977448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_58977563_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987
ENSMUSG00000019917.11_58999942_59057261_1	chr10	-	2124	10	FSM	ENSMUSG00000019917.11	ENSMUST00000165971.3	2532	10	408	0	408	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCTATGTATTTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	59057261	58999941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_59000767_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
ENSMUSG00000019917.11_58999942_59057321_1	chr10	-	2184	10	FSM	ENSMUSG00000019917.11	ENSMUST00000165971.3	2532	10	348	0	348	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCTATGTATTTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	59057321	58999941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_59000767_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
ENSMUSG00000019917.11_58999942_59057345_1	chr10	-	2208	10	FSM	ENSMUSG00000019917.11	ENSMUST00000165971.3	2532	10	324	0	324	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCTATGTATTTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	59057345	58999941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_59000767_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
ENSMUSG00000019917.11_59000256_59057669_1	chr10	-	2213	10	NNC	ENSMUSG00000019917.11	novel	2532	10	NA	NA	0	-314	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCTGTGATATAGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	59057669	59000255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_59000767_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028179_59028519_59028638_59057212
ENSMUSG00000019917.11_59012707_59057510_1	chr10	-	1190	7	ISM	ENSMUSG00000019917.11	ENSMUST00000165971.3	2532	10	159	12765	159	-12765	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTAGATATGGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	59057510	59012706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
ENSMUSG00000019920.19_58159288_58246024_1	chr10	+	720	5	ISM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	0	14489	0	-11376	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTACAGTATTTCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	58159287	58246024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874
ENSMUSG00000019920.19_58159404_58248277_1	chr10	+	657	6	ISM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	116	12236	116	-9123	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCCATGATAAGATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	58159403	58248277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224
ENSMUSG00000019920.19_58245434_58257400_1	chr10	+	713	7	ISM	ENSMUSG00000019920.19	ENSMUST00000105468.2	1205	10	15224	0	15224	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCTCTCTCTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	58245433	58257400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ENSMUSG00000019920.19_58248224_58257512_1	chr10	+	607	5	ISM	ENSMUSG00000019920.19	ENSMUST00000105468.2	1205	10	18014	-112	18014	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATGTTTATTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	58248223	58257512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ENSMUSG00000019920.19_58249793_58257631_1	chr10	+	576	4	ISM	ENSMUSG00000019920.19	ENSMUST00000105468.2	1205	10	19583	-231	19583	26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAAGGGTAGTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	58249792	58257631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58249888_58252455_58252505_58254220_58254297_58257275
ENSMUSG00000019920.19_58252465_58257800_1	chr10	+	641	3	ISM	ENSMUSG00000019920.19	ENSMUST00000105468.2	1205	10	22255	-400	22255	195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCACAAGTTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	58252464	58257800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58252505_58254220_58254297_58257275
ENSMUSG00000019923.15_72490727_72504725_1	chr10	+	867	8	FSM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	-1	272	0	-272	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGATGGTTTGATGATG	NA	NA	NA	NA	NA	NA	NA	NA	72490726	72504725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
ENSMUSG00000019923.15_72490727_72510416_1	chr10	+	1404	8	FSM	ENSMUSG00000019923.15	ENSMUST00000020081.11	1834	8	50	380	0	-380	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCTGACTCAGCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	72490726	72510416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509797
ENSMUSG00000019923.15_72490727_72510446_1	chr10	+	1434	8	FSM	ENSMUSG00000019923.15	ENSMUST00000020081.11	1834	8	50	350	0	-350	multi-exon	FALSE	canonical	NA	NA	NA	NA	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTCATTGGTTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	72490726	72510446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509797
ENSMUSG00000019923.15_72491815_72504832_1	chr10	+	891	7	ISM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	1087	165	1087	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGTAGTGAGATGCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	72491814	72504832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
ENSMUSG00000019923.15_72491870_72510574_1	chr10	+	1424	7	ISM	ENSMUSG00000019923.15	ENSMUST00000020081.11	1834	8	1193	222	1142	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGGCACTTAACATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	72491869	72510574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509797
ENSMUSG00000019923.15_72491884_72504875_1	chr10	+	865	7	ISM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	1156	122	1156	-122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAACAAGACTTTGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	72491883	72504875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
ENSMUSG00000019923.15_72492076_72504997_1	chr10	+	959	6	ISM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	1348	0	1348	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTGATGTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	72492075	72504997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
ENSMUSG00000019923.15_72492362_72510796_1	chr10	+	1486	5	ISM	ENSMUSG00000019923.15	ENSMUST00000020081.11	1834	8	1685	0	1634	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTCCTTGTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	72492361	72510796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509797
ENSMUSG00000019927.7_71090810_71094110_1	chr10	-	1069	3	ISM	ENSMUSG00000019927.7	ENSMUST00000020085.7	1431	7	26982	0	26982	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTGACTACTTAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	71094110	71090809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_71091705_71092444_71092539_71094030
ENSMUSG00000019927.7_71090945_71095593_1	chr10	-	982	4	ISM	ENSMUSG00000019927.7	ENSMUST00000020085.7	1431	7	25499	135	25499	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGACTTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	71095593	71090944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571
ENSMUSG00000019927.7_71091087_71098084_1	chr10	-	984	6	ISM	ENSMUSG00000019927.7	ENSMUST00000020085.7	1431	7	23008	277	23008	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGTATTTCTTAAACCG	NA	NA	NA	NA	NA	NA	NA	NA	71098084	71091086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571_71095650_71097913_71097946_71098028
ENSMUSG00000019927.7_71091249_71121048_1	chr10	-	948	7	FSM	ENSMUSG00000019927.7	ENSMUST00000020085.7	1431	7	44	439	44	-439	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATAATTTGTATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	71121048	71091248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571_71095650_71097913_71097946_71098028_71098093_71120930
ENSMUSG00000019929.17_97342426_97343631_1	chr10	+	210	2	ISM	ENSMUSG00000019929.17	ENSMUST00000163448.4	1758	8	24197	10374	23201	-9886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACATTCGCATCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	97342425	97343631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_97342569_97343564
ENSMUSG00000019929.17_97343618_97349528_1	chr10	+	223	3	ISM	ENSMUSG00000019929.17	ENSMUST00000163448.4	1758	8	25389	4477	24393	-3989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAACTCCACTTGGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	97343617	97349528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_97343679_97345826_97345921_97349460
ENSMUSG00000019935.17_89412171_89428825_1	chr10	-	949	6	ISM	ENSMUSG00000019935.17	ENST00000392989.3	1677	11	27950	0	6852	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCACCTCAGCTTACAAC	NA	NA	NA	NA	NA	NA	NA	NA	89428825	89412170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_89412520_89413762_89413891_89419257_89419369_89425357_89425491_89427883_89428024_89428737
ENSMUSG00000019935.17_89412377_89434569_1	chr10	-	901	8	ISM	ENSMUSG00000019935.17	ENST00000392989.3	1677	11	22206	206	1108	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCAAGATGAGTTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	89434569	89412376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_89412520_89413762_89413891_89419257_89419369_89425357_89425491_89427883_89428024_89428737_89428825_89433306_89433395_89434498
ENSMUSG00000019935.17_89413832_89442505_1	chr10	-	919	9	ISM	ENSMUSG00000019935.17	ENST00000392989.3	1677	11	14270	1661	-6828	-1661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGGTGTGGGGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	89442505	89413831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_89413891_89419257_89419369_89425357_89425491_89427883_89428024_89428737_89428825_89433306_89433395_89434498_89434614_89436064_89436184_89442438
ENSMUSG00000019935.17_89427929_89456745_1	chr10	-	881	7	ISM	ENSMUSG00000019935.17	ENST00000392989.3	1677	11	30	15758	30	-15758	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAGACAAGCATAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	89456745	89427928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_89428024_89428737_89428825_89433306_89433395_89434498_89434614_89436064_89436184_89442438_89442731_89456660
ENSMUSG00000019942.14_69173154_69178411_1	chr10	-	1621	4	ISM	ENSMUSG00000019942.14	ENSMUST00000119827.8	1253	9	10322	-1000	7561	982	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGTGGTCAGCAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	69178411	69173153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369
ENSMUSG00000019942.14_69173208_69178559_1	chr10	-	1715	4	ISM	ENSMUSG00000019942.14	ENSMUST00000119827.8	1253	9	10174	-946	7413	928	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTGGAGGTTTCTAACC	NA	NA	NA	NA	NA	NA	NA	NA	69178559	69173207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369
ENSMUSG00000019942.14_69173323_69180932_1	chr10	-	1623	5	ISM	ENSMUSG00000019942.14	ENSMUST00000119827.8	1253	9	7801	-831	5040	813	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCCAGCCCTGAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	69180932	69173322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890
ENSMUSG00000019942.14_69173442_69181940_1	chr10	-	1622	6	ISM	ENSMUSG00000019942.14	ENSMUST00000119827.8	1253	9	6793	-712	4032	694	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTAAGTTTGTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	69181940	69173441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904
ENSMUSG00000019942.14_69173485_69182000_1	chr10	-	1639	6	ISM	ENSMUSG00000019942.14	ENSMUST00000119827.8	1253	9	6733	-669	3972	651	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGATGCCTGAGACGACTG	NA	NA	NA	NA	NA	NA	NA	NA	69182000	69173484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904
ENSMUSG00000019942.14_69173670_69188733_1	chr10	-	1646	8	FSM	ENSMUSG00000019942.14	ENSMUST00000020099.13	4375	8	35	2694	0	466	multi-exon	FALSE	canonical	NA	NA	NA	NA	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCCTTGGCTTCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	69188733	69173669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
ENSMUSG00000019942.14_69174154_69176560_1	chr10	-	450	3	ISM	ENSMUSG00000019942.14	ENST00000614696.4	1115	7	9412	18	9412	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTCTGTATATGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	69176560	69174153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_69174427_69176310_69176472_69176544
ENSMUSG00000019942.14_69174355_69178436_1	chr10	-	464	4	ISM	ENSMUSG00000019942.14	ENST00000614696.4	1115	7	7536	219	7536	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGACAATCAGATTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	69178436	69174354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_69174427_69176310_69176472_69176544_69176709_69178369
ENSMUSG00000019942.14_69174381_69180941_1	chr10	-	403	4	ISM	ENSMUSG00000019942.14	ENST00000316629.8	925	6	5031	245	5031	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAAGCACCCGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	69180941	69174380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_69174427_69176310_69176453_69176544_69176709_69180890
ENSMUSG00000019942.14_69176429_69180951_1	chr10	-	439	4	ISM	ENSMUSG00000019942.14	ENST00000614696.4	1115	7	5021	2293	5021	-2275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGGCCAGAAGTCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	69180951	69176428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_69176472_69176544_69176709_69178369_69178541_69180890
ENSMUSG00000019942.14_69176429_69181980_1	chr10	-	388	4	ISM	ENSMUSG00000019942.14	ENST00000316629.8	925	6	3992	2293	3992	-2275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGGCCAGAAGTCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	69181980	69176428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_69176453_69176544_69176709_69180890_69181015_69181904
ENSMUSG00000019943.11_98804747_98826956_1	chr10	+	852	5	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	195	35049	195	-35049	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCACTGCTGTAGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98804746	98826956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923
ENSMUSG00000019943.11_98815623_98830601_1	chr10	+	796	6	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	11071	31404	11071	-31404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCAAAAAAGGAAAAATCCG	NA	NA	NA	NA	NA	NA	NA	NA	98815622	98830601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507
ENSMUSG00000019943.11_98815669_98832792_1	chr10	+	981	7	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	11117	29213	11117	-29213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGAAGGTCTTCCGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	98815668	98832792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629
ENSMUSG00000019943.11_98815696_98832792_1	chr10	+	954	7	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	11144	29213	11144	-29213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGAAGGTCTTCCGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	98815695	98832792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629
ENSMUSG00000019943.11_98822905_98835614_1	chr10	+	800	7	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	18353	26391	18353	-26391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAACTTAGTGAGACATC	NA	NA	NA	NA	NA	NA	NA	NA	98822904	98835614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600
ENSMUSG00000019943.11_98822934_98835704_1	chr10	+	861	7	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	18382	26301	18382	-26301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATGACGGTTGTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	98822933	98835704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600
ENSMUSG00000019943.11_98826935_98837172_1	chr10	+	812	6	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	22383	24833	22383	-24833	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCGCCATGTGGGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	98826934	98837172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149
ENSMUSG00000019943.11_98826992_98837233_1	chr10	+	816	6	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	22440	24772	22440	-24772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGATTATCAAGATGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	98826991	98837233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149
ENSMUSG00000019943.11_98827037_98837314_1	chr10	+	852	6	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	22485	24691	22485	-24691	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGCACAGTCCTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	98827036	98837314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149
ENSMUSG00000019943.11_98830578_98839072_1	chr10	+	862	5	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	26026	22933	26026	-22933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTGATCGAGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	98830577	98839072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002
ENSMUSG00000019943.11_98832716_98845287_1	chr10	+	874	5	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	28164	16718	28164	-16718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGAGGGCTGGAATTACT	NA	NA	NA	NA	NA	NA	NA	NA	98832715	98845287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265
ENSMUSG00000019943.11_98832718_98839193_1	chr10	+	803	4	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	28166	22812	28166	-22812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTATCGCGGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98832717	98839193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98832845_98835600_98835844_98837149_98837392_98839002
ENSMUSG00000019943.11_98832795_98845337_1	chr10	+	845	5	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	28243	16668	28243	-16668	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTCGGGCCATTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	98832794	98845337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265
ENSMUSG00000019943.11_98835599_98845445_1	chr10	+	905	4	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	31047	16560	31047	-16560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGATTTTTTTTCCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	98835598	98845445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98835844_98837149_98837392_98839002_98839241_98845265
ENSMUSG00000019943.11_98835733_98846128_1	chr10	+	836	5	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	31181	15877	31181	-15877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAACATACACTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	98835732	98846128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063
ENSMUSG00000019943.11_98837149_98846642_1	chr10	+	856	5	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	32597	15363	32597	-15363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAACCCATGCTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	98837148	98846642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535
ENSMUSG00000019943.11_98837304_98850512_1	chr10	+	893	6	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	32752	11493	32752	-11493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTGACTGTTAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	98837303	98850512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320
ENSMUSG00000019943.11_98839024_98850776_1	chr10	+	815	6	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	34472	11229	34472	-11229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTAAACCTCATCATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	98839023	98850776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745
ENSMUSG00000019943.11_98839081_98850835_1	chr10	+	817	6	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	34529	11170	34529	-11170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCACTCCTGCTTCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	98839080	98850835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745
ENSMUSG00000019943.11_98839144_98850876_1	chr10	+	795	6	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	34592	11129	34592	-11129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATCTCACGCACGATGA	NA	NA	NA	NA	NA	NA	NA	NA	98839143	98850876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745
ENSMUSG00000019943.11_98845369_98851491_1	chr10	+	824	6	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	40817	10514	40817	-10514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTGAAGGAATCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	98845368	98851491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345
ENSMUSG00000019943.11_98846605_98854613_1	chr10	+	801	6	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	42053	7392	42053	-7392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAAGCTGGTCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	98846604	98854613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576
ENSMUSG00000019943.11_98850460_98855157_1	chr10	+	788	6	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	45908	6848	45908	-6848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGAGTGGAAGTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	98850459	98855157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98855139
ENSMUSG00000019943.11_98850755_98855293_1	chr10	+	862	5	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	46203	6712	46203	-6712	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGTGTTCCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	98850754	98855293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98855139
ENSMUSG00000019943.11_98850908_98858795_1	chr10	+	835	6	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	46356	3210	46356	-3210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTTATTGATGACACTGA	NA	NA	NA	NA	NA	NA	NA	NA	98850907	98858795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98855139_98855294_98858669
ENSMUSG00000019943.11_98852805_98859036_1	chr10	+	792	4	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	48253	2969	48253	-2969	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTTTCACATATTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	98852804	98859036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98852893_98854576_98854760_98855139_98855294_98858669
ENSMUSG00000019943.11_98852848_98859104_1	chr10	+	817	4	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	48296	2901	48296	-2901	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGAATGTAGATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	98852847	98859104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_98852893_98854576_98854760_98855139_98855294_98858669
ENSMUSG00000019947.11_67993944_68113945_2	chr10	-	1161	4	NNC	ENSMUSG00000019947.11	novel	1279	5	NA	NA	621	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCTCGACTTTACATCA	NA	NA	NA	NA	NA	NA	NA	NA	68113945	67993943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_67994462_68021855_68022087_68078833_68079060_68113759
ENSMUSG00000019947.11_67993944_68114017_1	chr10	-	1233	4	NNC	ENSMUSG00000019947.11	novel	1279	5	NA	NA	549	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCTCGACTTTACATCA	NA	NA	NA	NA	NA	NA	NA	NA	68114017	67993943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_67994464_68021855_68022087_68078833_68079060_68113761
ENSMUSG00000019947.11_67993944_68114017_2	chr10	-	1232	4	NNC	ENSMUSG00000019947.11	novel	1279	5	NA	NA	549	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCTCGACTTTACATCA	NA	NA	NA	NA	NA	NA	NA	NA	68114017	67993943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_67994466_68021860_68022087_68078833_68079060_68113759
ENSMUSG00000019947.11_67993944_68114555_1	chr10	-	1268	5	FSM	ENSMUSG00000019947.11	ENST00000644638.1	1279	5	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCTCGACTTTACATCA	NA	NA	NA	NA	NA	NA	NA	NA	68114555	67993943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_67994464_68021855_68022087_68078833_68079060_68113759_68114015_68114519
ENSMUSG00000019948.5_89548001_89568107_1	chr10	-	1616	11	NNC	ENSMUSG00000019948.5	novel	1642	11	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAATATCTCACCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	89568107	89548000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564022_89564085_89564761_89564880_89567899
ENSMUSG00000019948.5_89548001_89568107_2	chr10	-	1615	11	NNC	ENSMUSG00000019948.5	novel	1642	11	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAATATCTCACCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	89568107	89548000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560933_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89567899
ENSMUSG00000019948.5_89548001_89568107_3	chr10	-	1616	11	NNC	ENSMUSG00000019948.5	novel	1642	11	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1041	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAATATCTCACCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	89568107	89548000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562505_89562623_89564015_89564085_89564761_89564880_89567899
ENSMUSG00000019948.5_89548001_89568107_4	chr10	-	1623	11	FSM	ENSMUSG00000019948.5	ENST00000546902.5	1642	11	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAATATCTCACCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	89568107	89548000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89567899
ENSMUSG00000019948.5_89548001_89568107_5	chr10	-	1615	11	NNC	ENSMUSG00000019948.5	novel	1642	11	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1066	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAATATCTCACCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	89568107	89548000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_89548423_89550731_89550863_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89567899
ENSMUSG00000019948.5_89548001_89568107_6	chr10	-	1618	11	NNC	ENSMUSG00000019948.5	novel	1642	11	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAATATCTCACCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	89568107	89548000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_89548423_89550731_89550871_89552934_89553102_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89567899
ENSMUSG00000019952.16_98942965_99033850_1	chr10	+	2795	12	FSM	ENSMUSG00000019952.16	ENSMUST00000020113.15	2862	12	67	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAAATGAAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	98942964	99033850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ENSMUSG00000019961.18_90985333_90989259_1	chr10	-	704	5	ISM	ENSMUSG00000019961.18	ENST00000575258.1	1183	9	17766	-5	17766	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCGGCACATTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	90989259	90985332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139
ENSMUSG00000019961.18_90985546_91000063_1	chr10	-	748	7	ISM	ENSMUSG00000019961.18	ENST00000575258.1	1183	9	6962	208	6962	-208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCATCTAAGTACGTCC	NA	NA	NA	NA	NA	NA	NA	NA	91000063	90985545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904
ENSMUSG00000019961.18_90987607_91001849_1	chr10	-	682	7	ISM	ENSMUSG00000019961.18	ENST00000575258.1	1183	9	5176	2269	5176	-2269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCCCTACGAAGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	91001849	90987606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804
ENSMUSG00000019961.18_90988488_91006974_1	chr10	-	762	7	ISM	ENSMUSG00000019961.18	ENST00000575258.1	1183	9	51	3150	51	-3150	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGATACAATTTAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	91006974	90988487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006925
ENSMUSG00000019961.18_90989195_91006974_1	chr10	-	524	5	ISM	ENSMUSG00000019961.18	ENSMUST00000072239.14	3533	9	470	5762	51	-3857	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCATTAACTAGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	91006974	90989194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ENSMUSG00000019961.18_90996279_90997943_1	chr10	-	924	2	ISM	ENSMUSG00000019961.18	ENST00000266732.8	2957	5	9419	4	9082	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTGTGTGGTCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	90997943	90996278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90996967_90997707
ENSMUSG00000019961.18_90996732_90998404_1	chr10	-	932	2	ISM	ENSMUSG00000019961.18	ENST00000266732.8	2957	5	8958	457	8621	-453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATTTTGTTAGATAAACA	NA	NA	NA	NA	NA	NA	NA	NA	90998404	90996731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90996967_90997707
ENSMUSG00000019961.18_90996866_90998529_1	chr10	-	923	2	ISM	ENSMUSG00000019961.18	ENST00000266732.8	2957	5	8833	591	8496	-587	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTTTTATGTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	90998529	90996865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90996967_90997707
ENSMUSG00000019961.18_90998317_90999924_1	chr10	-	927	2	ISM	ENSMUSG00000019961.18	ENST00000266732.8	2957	5	7438	2042	7101	-2038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTCTCCACGAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	90999924	90998316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90999224_90999904
ENSMUSG00000019961.18_90998463_91001855_1	chr10	-	971	3	ISM	ENSMUSG00000019961.18	ENST00000266732.8	2957	5	5507	2188	5170	-2184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTGGCATTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	91001855	90998462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90999224_90999904_91000064_91001804
ENSMUSG00000019961.18_90998536_91001889_1	chr10	-	932	3	ISM	ENSMUSG00000019961.18	ENST00000266732.8	2957	5	5473	2261	5136	-2257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGAATCCCTGTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	91001889	90998535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90999224_90999904_91000064_91001804
ENSMUSG00000019961.18_90998657_91006991_1	chr10	-	945	4	FSM	ENSMUSG00000019961.18	ENSMUST00000020123.7	3772	4	449	2378	34	-2378	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTCAATTCTCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	91006991	90998656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_90999224_90999904_91000064_91001804_91001932_91006899
ENSMUSG00000019961.18_90998719_91007032_1	chr10	-	924	4	FSM	ENSMUSG00000019961.18	ENSMUST00000020123.7	3772	4	408	2440	-7	-2440	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTGCAGGAGTCGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	91007032	90998718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_90999224_90999904_91000064_91001804_91001932_91006899
ENSMUSG00000019961.18_90998875_91007187_1	chr10	-	923	4	FSM	ENSMUSG00000019961.18	ENSMUST00000020123.7	3772	4	253	2596	-162	-2596	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCAGCTTCTCCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	91007187	90998874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_90999224_90999904_91000064_91001804_91001932_91006899
ENSMUSG00000019969.15_83734962_83769820_1	chr12	+	762	6	ISM	ENSMUSG00000019969.15	ENSMUST00000041806.13	2690	12	36	12049	36	-11025	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTACTTAGGGTAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	83734961	83769820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764
ENSMUSG00000019969.15_83746127_83771351_1	chr12	+	752	6	ISM	ENSMUSG00000019969.15	ENSMUST00000101225.2	3023	12	10790	10622	-212	-9494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCCATCCACTGGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	83746126	83771351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269
ENSMUSG00000019969.15_83759076_83775098_1	chr12	+	783	5	ISM	ENSMUSG00000019969.15	ENST00000557511.5	1230	9	12737	5747	12737	-5747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATGCTGGAGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	83759075	83775098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999
ENSMUSG00000019969.15_83759273_83777369_1	chr12	+	730	7	ISM	ENSMUSG00000019969.15	ENSMUST00000101225.2	3023	12	23936	4604	12934	-3476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTGGGAGGCCCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	83759272	83777369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312
ENSMUSG00000019969.15_83769763_83778566_1	chr12	+	770	6	ISM	ENSMUSG00000019969.15	ENSMUST00000101225.2	3023	12	34426	3407	23424	-2279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATATGCTGGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	83769762	83778566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447
ENSMUSG00000019969.15_83771276_83780722_1	chr12	+	727	6	ISM	ENSMUSG00000019969.15	ENSMUST00000101225.2	3023	12	35939	1251	24937	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGAAAGCGTTGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	83771275	83780722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
ENSMUSG00000019969.15_83771413_83780765_1	chr12	+	633	6	ISM	ENSMUSG00000019969.15	ENSMUST00000101225.2	3023	12	36076	1208	25074	-80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGTGTTCTACTTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	83771412	83780765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
ENSMUSG00000019969.15_83771413_83780829_1	chr12	+	697	6	ISM	ENSMUSG00000019969.15	ENSMUST00000101225.2	3023	12	36076	1144	25074	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTTATATCTAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	83771412	83780829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
ENSMUSG00000019969.15_83775017_83780970_1	chr12	+	743	5	ISM	ENSMUSG00000019969.15	ENSMUST00000101225.2	3023	12	39680	1003	28678	125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTTCTGCAGCTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	83775016	83780970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
ENSMUSG00000019969.15_83775056_83778499_1	chr12	+	182	3	ISM	ENSMUSG00000019969.15	ENST00000557511.5	1230	9	28717	2346	28717	-2346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGCCTCAGCAACCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	83775055	83778499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83775099_83775471_83775559_83778447
ENSMUSG00000019969.15_83775531_83780735_1	chr12	+	193	3	ISM	ENSMUSG00000019969.15	ENST00000557511.5	1230	9	29192	110	29192	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGCCCTCCCCATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	83775530	83780735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83775559_83778447_83778567_83780689
ENSMUSG00000019969.15_83777409_83781196_1	chr12	+	704	3	ISM	ENSMUSG00000019969.15	ENSMUST00000101225.2	3023	12	42072	777	31070	351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTAAACAAAGTGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	83777408	83781196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83777487_83778447_83778567_83780689
ENSMUSG00000019969.15_83777437_83781269_1	chr12	+	749	3	ISM	ENSMUSG00000019969.15	ENSMUST00000101225.2	3023	12	42100	704	31098	424	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAACCCTTACTGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	83777436	83781269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83777487_83778447_83778567_83780689
ENSMUSG00000019969.15_83778537_83780842_1	chr12	+	183	2	ISM	ENSMUSG00000019969.15	ENST00000557511.5	1230	9	32198	3	32198	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTTTCTGCAGTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	83778536	83780842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83778567_83780689
ENSMUSG00000019970.16_21870565_21875802_1	chr10	+	2450	12	NNC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATGTGTTAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	21870564	21875802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874064_21874149_21874558
ENSMUSG00000019971.11_100324444_100336097_1	chr10	+	1011	10	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	293	73420	293	-72868	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGATTTGAAAAATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	100324443	100336097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330762_100330817_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008
ENSMUSG00000019971.11_100331740_100344646_1	chr10	+	912	7	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	7589	64871	7589	-64319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACATCCTTGATGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	100331739	100344646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525
ENSMUSG00000019971.11_100334968_100350397_1	chr10	+	1004	9	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	10817	59120	10817	-58568	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATTCTGATGTGAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	100334967	100350397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319
ENSMUSG00000019971.11_100336074_100351093_1	chr10	+	1023	9	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	11923	58424	11923	-57872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCAGGCAATCTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	100336073	100351093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995
ENSMUSG00000019971.11_100344588_100353754_1	chr10	+	1062	9	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	20437	55763	20437	-55211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTATATTTTGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	100344587	100353754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638
ENSMUSG00000019971.11_100348151_100354637_1	chr10	+	1004	8	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	24000	54880	24000	-54328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCGGCACCTGAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	100348150	100354637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506
ENSMUSG00000019971.11_100350335_100359212_1	chr10	+	1014	7	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	26184	50305	26184	-49753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGAAAGATAATATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	100350334	100359212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091
ENSMUSG00000019971.11_100351007_100364492_1	chr10	+	1010	7	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	26856	45025	26856	-44473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGGCCTGGGAACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	100351006	100364492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410
ENSMUSG00000019971.11_100352024_100366015_1	chr10	+	1014	7	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	27873	43502	27873	-42950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCACTTAAGGACTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	100352023	100366015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879
ENSMUSG00000019971.11_100353668_100367068_1	chr10	+	1019	7	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	29517	42449	29517	-41897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAACTAGAGAAGAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	100353667	100367068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962
ENSMUSG00000019971.11_100354619_100373434_1	chr10	+	1012	7	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	30468	36083	30468	-35531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAGAACAGAAACTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	100354618	100373434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297
ENSMUSG00000019971.11_100359205_100373689_1	chr10	+	1035	6	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	35054	35828	35054	-35276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAATTAAAAGGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	100359204	100373689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297
ENSMUSG00000019971.11_100372718_100377498_1	chr10	+	1013	6	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	48567	32019	48567	-31467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGCCACGGCTGATCG	NA	NA	NA	NA	NA	NA	NA	NA	100372717	100377498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411
ENSMUSG00000019971.11_100373640_100379218_1	chr10	+	1012	7	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	49489	30299	49489	-29747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTAAAGAAAGTATCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	100373639	100379218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103
ENSMUSG00000019971.11_100374847_100380863_1	chr10	+	1009	7	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	50696	28654	50696	-28102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCCCAGAGTTTAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	100374846	100380863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778
ENSMUSG00000019971.11_100377475_100384671_1	chr10	+	946	6	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	53324	24846	53324	-24294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATGATTTAAATGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	100377474	100384671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589
ENSMUSG00000019971.11_100377619_100385184_1	chr10	+	1012	7	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	53468	24333	53468	-23781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAACTGGAAAGAAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	100377618	100385184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114
ENSMUSG00000019971.11_100379223_100387762_1	chr10	+	1008	7	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	55072	21755	55072	-21203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATCTGAAAAAGAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	100379222	100387762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678
ENSMUSG00000019971.11_100380838_100390346_1	chr10	+	1014	7	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	56687	19171	56687	-18619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCATACTTTAGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	100380837	100390346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272
ENSMUSG00000019971.11_100380918_100390396_1	chr10	+	984	7	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	56767	19121	56767	-18569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTATGCATCTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	100380917	100390396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272
ENSMUSG00000019971.11_100382303_100394024_1	chr10	+	935	7	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	58152	15493	58152	-14941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCAACTTGAACAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	100382302	100394024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932
ENSMUSG00000019975.13_90919141_90931783_1	chr10	+	274	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020149.6	3232	3	222	2736	222	-2736	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACCTTAATGAGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	90919140	90931783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_90919159_90929000_90929119_90931645
ENSMUSG00000019977.17_21171937_21217736_1	chr10	+	747	6	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	5	27046	0	4753	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCCCTTCAAACATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	21171936	21217736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612
ENSMUSG00000019977.17_21171957_21217800_1	chr10	+	791	6	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	25	26982	20	4817	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGCAGCAGATAGACGTG	NA	NA	NA	NA	NA	NA	NA	NA	21171956	21217800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612
ENSMUSG00000019977.17_21171957_21217837_1	chr10	+	819	6	ISM	ENSMUSG00000019977.17	ENSMUST00000020153.10	2793	18	79	26960	20	4854	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGCAGGGCGGGAAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	21171956	21217837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212874_21212975_21217612
ENSMUSG00000019977.17_21171957_21223204_1	chr10	+	1083	8	ISM	ENSMUSG00000019977.17	ENST00000367826.6	2639	17	44	21579	20	10221	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTGGATTTGAGACGG	NA	NA	NA	NA	NA	NA	NA	NA	21171956	21223204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21172076_21175076_21175143_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160
ENSMUSG00000019977.17_21175075_21223310_1	chr10	+	1072	7	ISM	ENSMUSG00000019977.17	ENST00000367826.6	2639	17	3162	21473	3042	10327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAAGGGTTAAATGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	21175074	21223310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21175143_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160
ENSMUSG00000019977.17_21180427_21218463_1	chr10	+	852	5	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	8495	26319	8394	5480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCCGCTATGTTTCAACG	NA	NA	NA	NA	NA	NA	NA	NA	21180426	21218463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297
ENSMUSG00000019977.17_21180460_21217709_1	chr10	+	289	3	ISM	ENSMUSG00000019977.17	ENST00000415177.6	2558	17	8547	27074	8427	4726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACTCCAAAATCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	21180459	21217709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21180543_21212865_21212975_21217612
ENSMUSG00000019977.17_21180481_21185061_1	chr10	+	321	3	ISM	ENSMUSG00000019977.17	ENSMUST00000092674.14	2625	5	8544	2047	8448	-2044	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATTTGGATAGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	21180480	21185061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21180543_21183483_21183679_21184997
ENSMUSG00000019977.17_21180514_21217767_1	chr10	+	293	3	ISM	ENSMUSG00000019977.17	ENST00000415177.6	2558	17	8601	27016	8481	4784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTCCGACACCAGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	21180513	21217767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21180543_21212865_21212975_21217612
ENSMUSG00000019977.17_21180517_21185130_1	chr10	+	354	3	ISM	ENSMUSG00000019977.17	ENSMUST00000092674.14	2625	5	8580	1978	8484	-1975	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCACTTGAGCCACGTC	NA	NA	NA	NA	NA	NA	NA	NA	21180516	21185130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21180543_21183483_21183679_21184997
ENSMUSG00000019977.17_21183581_21223234_1	chr10	+	822	6	ISM	ENSMUSG00000019977.17	ENSMUST00000020153.10	2793	18	11703	21563	11548	10251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGAGCATGGCCTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	21183580	21223234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21183679_21212874_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160
ENSMUSG00000019977.17_21183595_21227898_1	chr10	+	1038	8	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	11663	16884	11562	14915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCACGACGTGGTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	21183594	21227898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825
ENSMUSG00000019977.17_21183627_21212923_1	chr10	+	326	3	ISM	ENSMUSG00000019977.17	ENST00000314674.7	752	6	11594	60	11594	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGACTGTATCCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	21183626	21212923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21183679_21184997_21185214_21212865
ENSMUSG00000019977.17_21183661_21227937_1	chr10	+	1011	8	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	11729	16845	11628	14954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGGTATGTATGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	21183660	21227937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825
ENSMUSG00000019977.17_21217612_21230642_1	chr10	+	1065	8	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	45680	14140	45579	-14140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGACGCGTCTGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	21217611	21230642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537
ENSMUSG00000019977.17_21217811_21234688_1	chr10	+	1015	10	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	45879	10094	45778	-10094	internal_fragment	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCGAATCCTCGTCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	21217810	21234688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630
ENSMUSG00000019977.17_21217860_21234739_1	chr10	+	1017	10	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	45928	10043	45827	-10043	internal_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTCCAGTGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	21217859	21234739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630
ENSMUSG00000019977.17_21218297_21240674_1	chr10	+	1100	10	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	46365	4108	46264	-4108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGTTTTAATGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	21218296	21240674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573
ENSMUSG00000019977.17_21218410_21243583_1	chr10	+	1030	11	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	46478	1199	46377	-1199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGACCAGTGGCTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	21218409	21243583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540
ENSMUSG00000019977.17_21220973_21243685_1	chr10	+	1081	10	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	49041	1097	48940	-1097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCTGCTGTGTCCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	21220972	21243685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540
ENSMUSG00000019977.17_21223158_21244231_1	chr10	+	1007	10	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	51226	551	51125	-551	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCGAGTCAGCCCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	21223157	21244231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ENSMUSG00000019977.17_21223210_21244284_1	chr10	+	1008	10	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	51278	498	51177	-498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATGATTGTTAGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	21223209	21244284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ENSMUSG00000019977.17_21223247_21244442_1	chr10	+	1129	10	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	51315	340	51214	-340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	996	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTGGGAGGTATCAC	NA	NA	NA	NA	NA	NA	NA	NA	21223246	21244442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ENSMUSG00000019977.17_21234210_21244784_1	chr10	+	1045	5	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	62278	-2	62177	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGCAAAAATGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	21234209	21244784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ENSMUSG00000019978.17_25317509_25347496_1	chr10	+	1064	6	ISM	ENSMUSG00000019978.17	ENST00000525193.5	2070	14	24	41482	24	-41482	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGAGGAAAAGGTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	25317508	25347496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316
ENSMUSG00000019978.17_25317627_25349045_1	chr10	+	1057	7	ISM	ENSMUSG00000019978.17	ENST00000525193.5	2070	14	142	39933	142	-39933	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCACCATGCCAAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	25317626	25349045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973
ENSMUSG00000019978.17_25317819_25319810_1	chr10	+	308	2	ISM	ENSMUSG00000019978.17	ENST00000525193.5	2070	14	334	69168	334	-69168	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCCTTCTAGATGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	25317818	25319810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25317956_25319639
ENSMUSG00000019978.17_25317885_25355618_1	chr10	+	1021	9	ISM	ENSMUSG00000019978.17	ENST00000525193.5	2070	14	400	33360	400	-33360	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGGCTATGGAAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	25317884	25355618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565
ENSMUSG00000019978.17_25319710_25360245_1	chr10	+	1065	9	ISM	ENSMUSG00000019978.17	ENST00000525193.5	2070	14	2225	28733	2225	-28733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTAAACGTGTCTCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	25319709	25360245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105
ENSMUSG00000019978.17_25336688_25364991_1	chr10	+	1100	9	ISM	ENSMUSG00000019978.17	ENST00000525193.5	2070	14	19203	23987	19203	-23987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCCTATTAGCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	25336687	25364991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848
ENSMUSG00000019978.17_25345094_25377925_1	chr10	+	1154	8	ISM	ENSMUSG00000019978.17	ENSMUST00000217929.2	3621	16	27623	21490	-21588	-11053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACGTGGGAGAGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	25345093	25377925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721
ENSMUSG00000019978.17_25347490_25380075_1	chr10	+	1057	8	ISM	ENSMUSG00000019978.17	ENST00000530481.5	3748	17	30017	19342	-19192	-8903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCACAAAGGACAGAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	25347489	25380075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378037_25380034
ENSMUSG00000019978.17_25354992_25383756_1	chr10	+	1101	8	ISM	ENSMUSG00000019978.17	ENST00000530481.5	3748	17	37519	15661	-11690	-5222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCACCTTTCCTGTCACG	NA	NA	NA	NA	NA	NA	NA	NA	25354991	25383756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378037_25380034_25380158_25382072_25382172_25383674
ENSMUSG00000019978.17_25355564_25388978_1	chr10	+	1142	8	ISM	ENSMUSG00000019978.17	ENST00000530481.5	3748	17	38091	10439	-11118	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGTGAGCCTGGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	25355563	25388978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25355664_25360105_25360279_25364848_25364992_25377721_25378037_25380034_25380158_25382072_25382172_25383674_25383756_25388870
ENSMUSG00000019978.17_25360179_25383690_1	chr10	+	358	4	ISM	ENSMUSG00000019978.17	ENST00000525193.5	2070	14	42694	5288	-6503	-5288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGAAACACGAATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	25360178	25383690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25360279_25364848_25364992_25382072_25382172_25383674
ENSMUSG00000019978.17_25360179_25398321_1	chr10	+	1101	8	ISM	ENSMUSG00000019978.17	ENST00000530481.5	3748	17	42706	1096	-6503	-290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAAAATGCCAACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	25360178	25398321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25360279_25364848_25364992_25377721_25378037_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388984_25398194
ENSMUSG00000019978.17_25360179_25398444_1	chr10	+	687	5	ISM	ENSMUSG00000019978.17	ENST00000525271.5	2405	14	42706	167	-6503	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACCTTTTTTTAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	25360178	25398444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25360279_25364848_25364992_25383674_25383756_25388870_25388984_25398194
ENSMUSG00000019978.17_25364847_25398444_1	chr10	+	1126	7	ISM	ENSMUSG00000019978.17	ENST00000530481.5	3748	17	47374	973	-1835	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACCTTTTTTTAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	25364846	25398444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25364992_25377721_25378037_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388984_25398194
ENSMUSG00000019978.17_25364847_25398622_1	chr10	+	767	4	ISM	ENSMUSG00000019978.17	ENST00000525271.5	2405	14	47374	-11	-1835	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTTCATTCTTCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	25364846	25398622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25364992_25383674_25383756_25388870_25388984_25398194
ENSMUSG00000019978.17_25364932_25388927_1	chr10	+	297	4	ISM	ENSMUSG00000019978.17	ENST00000525193.5	2070	14	47447	51	-1750	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGTGGTAGTGCACAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	25364931	25388927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25364992_25382072_25382172_25383674_25383756_25388870
ENSMUSG00000019978.17_25368946_25398321_1	chr10	+	1444	8	FSM	ENSMUSG00000019978.17	ENST00000524581.5	1796	8	51	301	51	-290	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAAAATGCCAACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	25368945	25398321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_25369136_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388984_25398194
ENSMUSG00000019978.17_25369005_25398321_1	chr10	+	1385	8	FSM	ENSMUSG00000019978.17	ENST00000524581.5	1796	8	110	301	110	-290	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAAAATGCCAACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	25369004	25398321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_25369136_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388984_25398194
ENSMUSG00000019978.17_25369058_25398325_1	chr10	+	1336	8	FSM	ENSMUSG00000019978.17	ENST00000524581.5	1796	8	163	297	163	-286	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGCCAACAGCAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	25369057	25398325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_25369136_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388984_25398194
ENSMUSG00000019978.17_25371379_25398444_1	chr10	+	1337	7	ISM	ENSMUSG00000019978.17	ENSMUST00000092645.7	4280	20	87113	973	2484	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACCTTTTTTTAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	25371378	25398444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ENSMUSG00000019978.17_25377721_25398622_1	chr10	+	1405	6	ISM	ENSMUSG00000019978.17	ENSMUST00000092645.7	4280	20	93455	795	8826	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTTCATTCTTCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	25377720	25398622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ENSMUSG00000019978.17_25377721_25398622_2	chr10	+	1160	6	ISM	ENSMUSG00000019978.17	ENST00000530481.5	3748	17	60248	795	8826	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTTCATTCTTCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	25377720	25398622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25378037_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388984_25398194
ENSMUSG00000019978.17_25377889_25398622_1	chr10	+	1237	6	ISM	ENSMUSG00000019978.17	ENSMUST00000092645.7	4280	20	93623	795	8994	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTTCATTCTTCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	25377888	25398622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ENSMUSG00000019978.17_25377889_25398622_2	chr10	+	992	6	ISM	ENSMUSG00000019978.17	ENST00000530481.5	3748	17	60416	795	8994	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTTCATTCTTCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	25377888	25398622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25378037_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388984_25398194
ENSMUSG00000019978.17_25380068_25398875_1	chr10	+	1060	5	ISM	ENSMUSG00000019978.17	ENSMUST00000092645.7	4280	20	95802	542	11173	253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGACCAGGTACTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	25380067	25398875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ENSMUSG00000019978.17_25382105_25398998_1	chr10	+	1061	4	ISM	ENSMUSG00000019978.17	ENSMUST00000217929.2	3621	16	64634	417	13210	376	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAACCAGGCAGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	25382104	25398998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25382172_25383674_25383756_25388870_25388980_25398194
ENSMUSG00000019978.17_25388919_25399155_1	chr10	+	1026	2	ISM	ENSMUSG00000019978.17	ENST00000524581.5	1796	8	20024	-533	20024	-256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTGCAGCTTTGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	25388918	25399155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_25388984_25398194
ENSMUSG00000019979.13_90827249_90895961_1	chr10	-	2542	19	ISM	ENSMUSG00000019979.13	ENST00000547045.5	3737	25	19925	53	19925	-53	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATCAACTTTTTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	90895961	90827248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909
ENSMUSG00000019979.13_90827296_90896030_1	chr10	-	2564	19	ISM	ENSMUSG00000019979.13	ENST00000547045.5	3737	25	19856	100	19856	20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTTCAGCTCCTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	90896030	90827295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909
ENSMUSG00000019979.13_90827316_90915906_1	chr10	-	1118	7	FSM	ENSMUSG00000019979.13	ENST00000552268.5	1121	7	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATGGCTAAGCGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	90915906	90827315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_90827459_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748
ENSMUSG00000019979.13_90827316_90915906_2	chr10	-	1113	7	NNC	ENSMUSG00000019979.13	novel	1121	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATGGCTAAGCGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	90915906	90827315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_90827459_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915753
ENSMUSG00000019979.13_90827355_90896073_1	chr10	-	2548	19	ISM	ENSMUSG00000019979.13	ENST00000547045.5	3737	25	19813	159	19813	-39	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATAATCTCGGTATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	90896073	90827354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909
ENSMUSG00000019979.13_90831595_90897692_1	chr10	-	2567	19	ISM	ENSMUSG00000019979.13	ENST00000547045.5	3737	25	18194	4399	18194	-4279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTACCCACGGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	90897692	90831594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559
ENSMUSG00000019979.13_90835561_90903040_1	chr10	-	2542	19	ISM	ENSMUSG00000019979.13	ENST00000547045.5	3737	25	12846	8365	12846	-8245	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGCGACCAAGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	90903040	90835560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942
ENSMUSG00000019979.13_90836924_90913463_1	chr10	-	2565	19	ISM	ENSMUSG00000019979.13	ENST00000547045.5	3737	25	2423	9728	2423	-9608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCTCCAAGATTCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	90913463	90836923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395
ENSMUSG00000019979.13_90836968_90913532_1	chr10	-	2590	19	ISM	ENSMUSG00000019979.13	ENST00000547045.5	3737	25	2354	9772	2354	-9652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATTTTTGCAAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	90913532	90836967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395
ENSMUSG00000019979.13_90849937_90915422_1	chr10	-	2600	18	ISM	ENSMUSG00000019979.13	ENST00000547045.5	3737	25	464	22741	464	-22621	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGAGCCATTAAGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	90915422	90849936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90850039_90854827_90854948_90856517_90856644_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308
ENSMUSG00000019979.13_90850007_90915465_1	chr10	-	2573	18	ISM	ENSMUSG00000019979.13	ENST00000547045.5	3737	25	421	22811	421	-22691	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCCTGAAGCCCAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	90915465	90850006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90850039_90854827_90854948_90856517_90856644_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308
ENSMUSG00000019982.16_21000976_21015254_1	chr10	-	1276	2	ISM	ENSMUSG00000019982.16	ENST00000525369.5	2871	13	17105	139	17105	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCTTCAGGGAAGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	21015254	21000975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_21002189_21015191
ENSMUSG00000019982.16_21001175_21017783_1	chr10	-	1359	4	ISM	ENSMUSG00000019982.16	ENST00000525369.5	2871	13	14576	338	14576	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTGTTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	21017783	21001174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657
ENSMUSG00000019982.16_21001304_21017958_1	chr10	-	1318	5	ISM	ENSMUSG00000019982.16	ENST00000525369.5	2871	13	14401	467	14401	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGATAACGGACTATGCA	NA	NA	NA	NA	NA	NA	NA	NA	21017958	21001303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870
ENSMUSG00000019982.16_21001729_21026273_1	chr10	-	1306	9	ISM	ENSMUSG00000019982.16	ENST00000525369.5	2871	13	6086	892	6086	-554	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGGTGAATTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21026273	21001728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21024230_21024336_21024676_21024758_21026204
ENSMUSG00000019982.16_21001788_21026326_1	chr10	-	1300	9	ISM	ENSMUSG00000019982.16	ENST00000525369.5	2871	13	6033	951	6033	-613	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAATAAAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	21026326	21001787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21024230_21024336_21024676_21024758_21026204
ENSMUSG00000019982.16_21001949_21028396_1	chr10	-	1314	10	ISM	ENSMUSG00000019982.16	ENST00000525369.5	2871	13	3963	1112	3963	-774	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGCAGCACCAAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	21028396	21001948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21024230_21024336_21024676_21024758_21026204_21026440_21028334
ENSMUSG00000019982.16_21002008_21028450_1	chr10	-	1309	10	ISM	ENSMUSG00000019982.16	ENST00000525369.5	2871	13	3909	1171	3909	-833	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCGTGGAGCGCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	21028450	21002007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21024230_21024336_21024676_21024758_21026204_21026440_21028334
ENSMUSG00000019982.16_21002075_21028489_1	chr10	-	1281	10	ISM	ENSMUSG00000019982.16	ENST00000525369.5	2871	13	3870	1238	3870	-900	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGACATTTCCAGAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	21028489	21002074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21024230_21024336_21024676_21024758_21026204_21026440_21028334
ENSMUSG00000019982.16_21002132_21017714_1	chr10	-	284	4	ISM	ENSMUSG00000019982.16	ENST00000316528.12	3310	15	19116	1295	14645	-957	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGGTCCGGCTCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	21017714	21002131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_21002189_21015191_21015251_21016465_21016577_21017657
ENSMUSG00000019982.16_21002172_21017783_1	chr10	-	313	4	ISM	ENSMUSG00000019982.16	ENST00000316528.12	3310	15	19047	1335	14576	-997	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCCAGCATCCTGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	21017783	21002171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_21002189_21015191_21015251_21016465_21016577_21017657
ENSMUSG00000019982.16_21017913_21022156_1	chr10	-	276	3	ISM	ENSMUSG00000019982.16	ENSMUST00000020158.9	3074	15	14727	16738	10203	-2721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGCAGCTCAAGAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	21022156	21017912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_21017986_21018860_21018992_21022084
ENSMUSG00000019982.16_21017955_21022215_1	chr10	-	293	3	ISM	ENSMUSG00000019982.16	ENSMUST00000020158.9	3074	15	14668	16780	10144	-2763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAAAGCTCTCCTCGAAC	NA	NA	NA	NA	NA	NA	NA	NA	21022215	21017954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_21017986_21018860_21018992_21022084
ENSMUSG00000019982.16_21022285_21026267_1	chr10	-	304	4	ISM	ENSMUSG00000019982.16	ENSMUST00000020158.9	3074	15	10616	21110	6092	1936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGACCTCATGGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	21026267	21022284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_21022340_21024230_21024336_21024676_21024758_21026204
ENSMUSG00000019982.16_21024221_21032299_1	chr10	-	806	6	FSM	ENSMUSG00000019982.16	ENST00000420123.6	866	6	60	0	60	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGGGATGGGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	21032299	21024220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_21024336_21024676_21024758_21026204_21026440_21028334_21028556_21028790_21028884_21032238
ENSMUSG00000019982.16_21028499_21032286_1	chr10	-	270	4	ISM	ENSMUSG00000019982.16	ENST00000528774.5	2122	14	73	13307	73	-4278	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGGGAGAATTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	21032286	21028498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_21028556_21028790_21028884_21030582_21030655_21032238
ENSMUSG00000019982.16_21028533_21032356_1	chr10	-	306	4	ISM	ENSMUSG00000019982.16	ENST00000528774.5	2122	14	3	13341	3	-4312	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCGAAGCGTTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	21032356	21028532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_21028556_21028790_21028884_21030582_21030655_21032238
ENSMUSG00000019984.17_24745996_24778391_1	chr10	+	2629	19	ISM	ENSMUSG00000019984.17	ENST00000368060.7	4086	28	8	10306	8	0	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTACCATGCAGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	24745995	24778391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24746045_24746537_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190
ENSMUSG00000019984.17_24745996_24778391_4	chr10	+	2634	19	NNC	ENSMUSG00000019984.17	novel	2655	20	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTACCATGCAGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	24745995	24778391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_24746045_24746537_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758553_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190
ENSMUSG00000019984.17_24745996_24778391_5	chr10	+	2643	19	NNC	ENSMUSG00000019984.17	novel	2655	20	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTACCATGCAGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	24745995	24778391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_24746045_24746537_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764283_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190
ENSMUSG00000019984.17_24745996_24778391_6	chr10	+	2644	20	NNC	ENSMUSG00000019984.17	novel	2655	20	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1036	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTACCATGCAGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	24745995	24778391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_24746042_24746537_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24759101_24759120_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190
ENSMUSG00000019984.17_24745996_24778391_7	chr10	+	2647	20	FSM	ENSMUSG00000019984.17	ENST00000368053.8	2655	20	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTACCATGCAGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	24745995	24778391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_24746045_24746537_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24759101_24759120_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190
ENSMUSG00000019984.17_24745996_24778391_8	chr10	+	2648	19	NNC	ENSMUSG00000019984.17	novel	2655	20	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTACCATGCAGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	24745995	24778391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_24746045_24746537_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764278_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190
ENSMUSG00000019984.17_24755619_24779653_1	chr10	+	2005	14	ISM	ENSMUSG00000019984.17	ENST00000354577.8	4102	29	9631	9042	9631	1262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTTGTGAAGGAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	24755618	24779653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24755684_24758451_24758548_24759101_24759120_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558
ENSMUSG00000019984.17_24764349_24780324_1	chr10	+	2017	12	ISM	ENSMUSG00000019984.17	ENST00000354577.8	4102	29	18361	8371	18361	1933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACTAGAGACTCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	24764348	24780324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158
ENSMUSG00000019984.17_24764469_24781754_1	chr10	+	1983	13	ISM	ENSMUSG00000019984.17	ENST00000354577.8	4102	29	18481	6941	18481	3363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATGAAATGTGCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	24764468	24781754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719
ENSMUSG00000019984.17_24767103_24781888_1	chr10	+	2001	12	ISM	ENSMUSG00000019984.17	ENST00000354577.8	4102	29	21115	6807	21115	3497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGAGGACAACCCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	24767102	24781888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719
ENSMUSG00000019984.17_24768427_24783094_1	chr10	+	2011	12	ISM	ENSMUSG00000019984.17	ENST00000354577.8	4102	29	22439	5601	22439	4703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGGACCCTTCCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	24768426	24783094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079
ENSMUSG00000019984.17_24768492_24783140_1	chr10	+	1992	12	ISM	ENSMUSG00000019984.17	ENST00000354577.8	4102	29	22504	5555	22504	4749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCCCGCTGCCCACGCTC	NA	NA	NA	NA	NA	NA	NA	NA	24768491	24783140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079
ENSMUSG00000019984.17_24769574_24783876_1	chr10	+	2014	12	ISM	ENSMUSG00000019984.17	ENST00000354577.8	4102	29	23586	4819	23586	-4819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGGTCTGATCATCACG	NA	NA	NA	NA	NA	NA	NA	NA	24769573	24783876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832
ENSMUSG00000019984.17_24771631_24784702_1	chr10	+	2001	12	NNC	ENSMUSG00000019984.17	novel	4086	28	NA	NA	25643	-3993	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCACCACTCCAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	24771630	24784702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781950_24783074_24783246_24783832_24783906_24784530
ENSMUSG00000019984.17_24773184_24786697_1	chr10	+	2016	13	ISM	ENSMUSG00000019984.17	ENST00000354577.8	4102	29	27196	1998	27196	-1998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCATCTGCGACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	24773183	24786697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631
ENSMUSG00000019984.17_24774382_24788620_1	chr10	+	1994	13	ISM	ENSMUSG00000019984.17	ENST00000354577.8	4102	29	28394	75	28394	-75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTAGCAAGATGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	24774381	24788620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ENSMUSG00000019984.17_24774388_24788644_1	chr10	+	2010	13	NNC	ENSMUSG00000019984.17	novel	4086	28	NA	NA	28400	-51	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCACCCCAGGCCCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	24774387	24788644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781950_24783074_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ENSMUSG00000019988.8_92520608_92534734_1	chr10	-	2654	9	ISM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	23548	0	23548	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTCTGAGCTTGAACC	NA	NA	NA	NA	NA	NA	NA	NA	92534734	92520607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587
ENSMUSG00000019988.8_92520964_92536811_1	chr10	-	2583	10	ISM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	21471	356	21471	-356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTATTTAATAAATATAAAC	NA	NA	NA	NA	NA	NA	NA	NA	92536811	92520963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581
ENSMUSG00000019988.8_92521077_92547140_1	chr10	-	2578	11	ISM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	11142	469	11142	-469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATATGTACATCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	92547140	92521076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032
ENSMUSG00000019988.8_92521375_92555396_1	chr10	-	2574	14	ISM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	2886	767	2886	-767	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACTAACTAAATATTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	92555396	92521374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347
ENSMUSG00000019988.8_92521511_92558235_1	chr10	-	2584	15	FSM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	47	903	47	-903	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATAATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	92558235	92521510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
ENSMUSG00000019996.18_20046932_20156377_1	chr10	+	2917	18	NNC	ENSMUSG00000019996.18	novel	2929	18	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTCTGTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	20046931	20156377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_20047068_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126121_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143159_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ENSMUSG00000019996.18_20046932_20156377_2	chr10	+	2923	18	FSM	ENSMUSG00000019996.18	ENST00000454590.5	2929	18	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTCTGTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	20046931	20156377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_20047068_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143159_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ENSMUSG00000019996.18_20046932_20156377_3	chr10	+	2920	18	NNC	ENSMUSG00000019996.18	novel	2929	18	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTCTGTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	20046931	20156377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_20047068_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143159_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155744
ENSMUSG00000019996.18_20046932_20156377_4	chr10	+	2914	18	NNC	ENSMUSG00000019996.18	novel	2929	18	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTCTGTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	20046931	20156377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_20047068_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143159_20145114_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ENSMUSG00000019996.18_20046932_20156377_5	chr10	+	2916	18	NNC	ENSMUSG00000019996.18	novel	2929	18	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTCTGTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	20046931	20156377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_20047068_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143159_20145105_20145335_20149032_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ENSMUSG00000019996.18_20046932_20156377_6	chr10	+	2922	18	NNC	ENSMUSG00000019996.18	novel	2929	18	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	4226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTCTGTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	20046931	20156377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_20047068_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132930_20133044_20137604_20137730_20142481_20142598_20142868_20143159_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ENSMUSG00000019996.18_20046932_20156377_7	chr10	+	2922	18	NNC	ENSMUSG00000019996.18	novel	2929	18	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	4144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTCTGTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	20046931	20156377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_20047068_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142869_20143159_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ENSMUSG00000019996.18_20046983_20156377_1	chr10	+	2864	18	NNC	ENSMUSG00000019996.18	novel	2929	18	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTCTGTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	20046982	20156377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_20047068_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143159_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153878_20154092_20155741
ENSMUSG00000019996.18_20046983_20156377_2	chr10	+	2870	18	NNC	ENSMUSG00000019996.18	novel	2929	18	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTCTGTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	20046982	20156377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_20047068_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143159_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150349_20150406_20151921_20152022_20153870_20154092_20155741
ENSMUSG00000019996.18_20081161_20155995_1	chr10	+	2466	18	FSM	ENSMUSG00000019996.18	ENST00000544465.5	2593	18	47	80	47	-80	multi-exon	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAATTTTTTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	20081160	20155995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_20081222_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143159_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ENSMUSG00000019997.12_24471455_24472716_1	chr10	+	794	4	FSM	ENSMUSG00000019997.12	ENSMUST00000176228.2	2490	4	-169	1865	115	-1860	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGACCTGTGGGATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	24471454	24472716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_24471687_24471773_24471997_24472244_24472497_24472629
ENSMUSG00000019997.12_24471624_24473257_1	chr10	+	795	5	FSM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	284	1319	0	-1319	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGAGCTTTCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	24471623	24473257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_24471687_24471773_24471997_24472244_24472497_24472629_24472842_24473212
ENSMUSG00000019997.12_24471919_24473447_1	chr10	+	777	4	ISM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	579	1129	295	-1129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGACAATGACATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	24471918	24473447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24471997_24472244_24472497_24472629_24472842_24473212
ENSMUSG00000019997.12_24472353_24473635_1	chr10	+	779	3	ISM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	1013	941	729	-941	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTATCCCACCAAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	24472352	24473635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24472497_24472629_24472842_24473212
ENSMUSG00000019997.12_24472394_24473702_1	chr10	+	805	3	ISM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	1054	874	770	-874	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTCGAGACAGTTTACAC	NA	NA	NA	NA	NA	NA	NA	NA	24472393	24473702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24472497_24472629_24472842_24473212
ENSMUSG00000019997.12_24472684_24473834_1	chr10	+	780	2	ISM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	1344	742	1060	-742	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCAGTGTGCCTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	24472683	24473834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24472842_24473212
ENSMUSG00000019997.12_24472748_24473904_1	chr10	+	786	2	ISM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	1408	672	1124	-672	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGCGAGAGCTGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	24472747	24473904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24472842_24473212
ENSMUSG00000019997.12_24472814_24473966_1	chr10	+	782	2	ISM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	1474	610	1190	-610	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCAGTTTCAGCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	24472813	24473966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24472842_24473212
ENSMUSG00000019998.7_24025251_24063603_1	chr10	+	892	10	FSM	ENSMUSG00000019998.7	ENSMUST00000220041.2	3435	10	26	2517	26	-1256	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGAAAGGCTGAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	24025250	24063603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_24025307_24031132_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
ENSMUSG00000019998.7_24053070_24063815_1	chr10	+	892	8	ISM	ENSMUSG00000019998.7	ENSMUST00000020174.7	2502	10	27855	1044	27845	-1044	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGCACAGCTTCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	24053069	24063815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
ENSMUSG00000019998.7_24055015_24063923_1	chr10	+	936	7	ISM	ENSMUSG00000019998.7	ENSMUST00000020174.7	2502	10	29800	936	29790	-936	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATTATTTGATTGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	24055014	24063923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
ENSMUSG00000019998.7_24056760_24064095_1	chr10	+	877	5	ISM	ENSMUSG00000019998.7	ENSMUST00000020174.7	2502	10	31545	764	31535	-764	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTGGTCCACAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	24056759	24064095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
ENSMUSG00000019998.7_24057414_24064261_1	chr10	+	991	4	ISM	ENSMUSG00000019998.7	ENSMUST00000020174.7	2502	10	32199	598	32189	-598	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTTAATCCAATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	24057413	24064261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_24057513_24058666_24058740_24060884_24060968_24063525
ENSMUSG00000020009.14_19467706_19485977_1	chr10	+	2097	7	NNC	ENSMUSG00000020009.14	novel	2112	7	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTGGATATTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	19467705	19485977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_19467946_19473163_19473273_19477067_19477232_19479501_19479681_19481981_19482169_19483004_19483130_19484884
ENSMUSG00000020009.14_19467706_19485977_2	chr10	+	2098	7	NNC	ENSMUSG00000020009.14	novel	2112	7	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTGGATATTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	19467705	19485977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_19467946_19473163_19473279_19477067_19477232_19479506_19479681_19481981_19482169_19483004_19483130_19484884
ENSMUSG00000020010.8_23727495_23741609_1	chr10	+	608	4	NIC	ENSMUSG00000020010.8	novel	1811	7	NA	NA	2	-3946	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTCTCGGCCTCGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	23727494	23741609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_23727695_23727804_23727936_23732095_23732289_23741525
ENSMUSG00000020010.8_23727500_23741568_1	chr10	+	854	5	ISM	ENSMUSG00000020010.8	ENSMUST00000020190.8	1811	7	140	4173	7	-3987	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATGGAGACAGAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	23727499	23741568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_23727695_23727804_23727936_23732095_23732289_23740235_23740528_23741525
ENSMUSG00000020010.8_23727535_23741599_1	chr10	+	850	5	ISM	ENSMUSG00000020010.8	ENSMUST00000020190.8	1811	7	175	4142	42	-3956	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCAGAGCTGAGGTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	23727534	23741599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_23727695_23727804_23727936_23732095_23732289_23740235_23740528_23741525
ENSMUSG00000020010.8_23727562_23741622_1	chr10	+	846	5	ISM	ENSMUSG00000020010.8	ENSMUST00000020190.8	1811	7	202	4119	69	-3933	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCAGCACGCCACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	23727561	23741622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_23727695_23727804_23727936_23732095_23732289_23740235_23740528_23741525
ENSMUSG00000020010.8_23727568_23741637_1	chr10	+	563	4	NIC	ENSMUSG00000020010.8	novel	1811	7	NA	NA	75	-3918	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCAGAGGTTAACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	23727567	23741637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_23727695_23727804_23727936_23732095_23732289_23741525
ENSMUSG00000020010.8_23727588_23741662_1	chr10	+	860	5	ISM	ENSMUSG00000020010.8	ENSMUST00000020190.8	1811	7	228	4079	95	-3893	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCAGGACTGTGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	23727587	23741662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_23727695_23727804_23727936_23732095_23732289_23740235_23740528_23741525
ENSMUSG00000020010.8_23727608_23741679_1	chr10	+	565	4	NIC	ENSMUSG00000020010.8	novel	1811	7	NA	NA	115	-3876	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTTCTCATCGGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	23727607	23741679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_23727695_23727804_23727936_23732095_23732289_23741525
ENSMUSG00000020010.8_23727609_23741702_1	chr10	+	587	4	NIC	ENSMUSG00000020010.8	novel	1811	7	NA	NA	116	-3853	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCCCAGGAAAGATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	23727608	23741702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_23727695_23727804_23727936_23732095_23732289_23741525
ENSMUSG00000020010.8_23727616_23741674_1	chr10	+	844	5	ISM	ENSMUSG00000020010.8	ENSMUST00000020190.8	1811	7	256	4067	123	-3881	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCCGTTCTCATCGGG	NA	NA	NA	NA	NA	NA	NA	NA	23727615	23741674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_23727695_23727804_23727936_23732095_23732289_23740235_23740528_23741525
ENSMUSG00000020010.8_23727645_23741708_1	chr10	+	849	5	ISM	ENSMUSG00000020010.8	ENSMUST00000020190.8	1811	7	285	4033	152	-3847	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAAAGATTTATTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	23727644	23741708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_23727695_23727804_23727936_23732095_23732289_23740235_23740528_23741525
ENSMUSG00000020010.8_23727839_23741822_1	chr10	+	587	3	ISM	ENSMUSG00000020010.8	ENST00000427187.6	1203	6	346	3733	346	-3733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGAATGGACGAGGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	23727838	23741822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_23727936_23732095_23732289_23741525
ENSMUSG00000020010.8_23732094_23743065_1	chr10	+	640	3	ISM	ENSMUSG00000020010.8	ENST00000427187.6	1203	6	4601	2490	4601	-2490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAAGAATTCTCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	23732093	23743065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_23732289_23741525_23741897_23742991
ENSMUSG00000020010.8_23732094_23743065_2	chr10	+	932	4	ISM	ENSMUSG00000020010.8	ENST00000367927.9	1538	7	4638	2496	4601	-2490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	828	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAAGAATTCTCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	23732093	23743065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_23732289_23740235_23740528_23741525_23741897_23742991
ENSMUSG00000020010.8_23740356_23745549_1	chr10	+	840	4	ISM	ENSMUSG00000020010.8	ENST00000367927.9	1538	7	12900	12	12863	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1088	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGATCCCTTCATTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	23740355	23745549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_23740528_23741525_23741897_23742991_23743166_23745426
ENSMUSG00000020018.7_93418891_93425568_1	chr10	-	848	4	NNC	ENSMUSG00000020018.7	novel	861	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGTTCACTTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	93425568	93418890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_93419393_93419891_93419944_93423859_93423986_93425400
ENSMUSG00000020018.7_93418891_93425568_2	chr10	-	852	4	NNC	ENSMUSG00000020018.7	novel	861	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGTTCACTTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	93425568	93418890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_93419393_93419891_93419957_93423859_93423986_93425409
ENSMUSG00000020019.5_93477337_93518375_1	chr10	+	660	3	ISM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	21	63334	21	-63334	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCAAGCGACAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	93477336	93518375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93477371_93480332_93480863_93518279
ENSMUSG00000020019.5_93480504_93543194_1	chr10	+	693	3	ISM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	3188	38515	3188	-38515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCACCATTGTACAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	93480503	93543194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93480863_93518279_93518559_93543139
ENSMUSG00000020019.5_93480659_93546457_1	chr10	+	728	4	ISM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	3343	35252	3343	-35252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCAACGCTGTAAGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	93480658	93546457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93480863_93518279_93518559_93543139_93543267_93546339
ENSMUSG00000020019.5_93480745_93546478_1	chr10	+	663	4	ISM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	3429	35231	3429	-35231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTACCGCGACCTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	93480744	93546478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93480863_93518279_93518559_93543139_93543267_93546339
ENSMUSG00000020019.5_93480818_93569547_1	chr10	+	719	5	ISM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	3502	12162	3502	-12162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCAAGCCTGGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	93480817	93569547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93480863_93518279_93518559_93543139_93543267_93546339_93546529_93569468
ENSMUSG00000020019.5_93518417_93570050_1	chr10	+	688	5	ISM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	41101	11659	41101	-11659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTACCACGAAGTCCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	93518416	93570050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93518559_93543139_93543267_93546339_93546529_93569468_93569683_93570034
ENSMUSG00000020019.5_93518482_93570104_1	chr10	+	677	5	ISM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	41166	11605	41166	-11605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAATGGGAGGATGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	93518481	93570104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93518559_93543139_93543267_93546339_93546529_93569468_93569683_93570034
ENSMUSG00000020019.5_93543149_93576930_1	chr10	+	655	5	ISM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	65833	4779	65833	-4779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGCCCACGACAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	93543148	93576930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93543267_93546339_93546529_93569468_93569683_93570034_93570151_93576912
ENSMUSG00000020019.5_93543194_93576990_1	chr10	+	670	5	ISM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	65878	4719	65878	-4719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCACCAAACTGAAGATC	NA	NA	NA	NA	NA	NA	NA	NA	93543193	93576990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93543267_93546339_93546529_93569468_93569683_93570034_93570151_93576912
ENSMUSG00000020019.5_93543240_93577052_1	chr10	+	686	5	ISM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	65924	4657	65924	-4657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCTGCACCTGTCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	93543239	93577052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93543267_93546339_93546529_93569468_93569683_93570034_93570151_93576912
ENSMUSG00000020019.5_93546410_93581709_1	chr10	+	751	5	ISM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	69094	0	69094	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAGCACTGAAGGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	93546409	93581709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_93546529_93569468_93569683_93570034_93570151_93576912_93577084_93581578
ENSMUSG00000020022.18_94035810_94057305_1	chr10	+	936	3	ISM	ENSMUSG00000020022.18	ENSMUST00000020209.16	1110	4	993	0	944	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3509	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGCAAGATGTTCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	94035809	94057305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_94035895_94039149_94039238_94056542
ENSMUSG00000020022.18_94039149_94057305_1	chr10	+	852	2	ISM	ENSMUSG00000020022.18	ENSMUST00000020209.16	1110	4	4332	0	4283	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1842	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGCAAGATGTTCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	94039148	94057305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_94039238_94056542
ENSMUSG00000020023.19_94414600_94424398_1	chr10	+	2547	3	ISM	ENSMUSG00000020023.19	ENSMUST00000117929.2	3317	4	2475	265	2475	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTTCTAACCTTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	94414599	94424398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_94415202_94418135_94418272_94422589
ENSMUSG00000020023.19_94415050_94424849_1	chr10	+	2548	3	ISM	ENSMUSG00000020023.19	ENSMUST00000117929.2	3317	4	2925	-186	2925	186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCCGCTAGCAGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	94415049	94424849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_94415202_94418135_94418272_94422589
ENSMUSG00000020024.8_94524696_94622679_1	chr10	+	2089	14	ISM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	180	4036	180	-4036	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAGAAACAGAAAACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	94524695	94622679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605
ENSMUSG00000020024.8_94524803_94624585_1	chr10	+	2089	15	ISM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	287	2130	287	-2130	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTAATTTTGGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	94524802	94624585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508
ENSMUSG00000020024.8_94554795_94625634_1	chr10	+	2084	15	ISM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	30279	1081	30279	-1081	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACTGGAGGAGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	94554794	94625634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ENSMUSG00000020024.8_94554852_94625681_1	chr10	+	2074	15	ISM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	30336	1034	30336	-1034	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCAAAGCCAGAGACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	94554851	94625681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ENSMUSG00000020024.8_94555509_94625879_1	chr10	+	2087	14	ISM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	30993	836	30993	-836	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGCAAAAATAAAAGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	94555508	94625879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ENSMUSG00000020024.8_94561507_94626055_1	chr10	+	2169	13	ISM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	36991	660	36991	-660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAGTTTTGGAAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	94561506	94626055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ENSMUSG00000020024.8_94573709_94626274_1	chr10	+	2087	11	ISM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	49193	441	49193	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTTTTAGAAAATGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	94573708	94626274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ENSMUSG00000020024.8_94573782_94626340_1	chr10	+	2080	11	ISM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	49266	375	49266	-375	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTACCGCTGACATTT	NA	NA	NA	NA	NA	NA	NA	NA	94573781	94626340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ENSMUSG00000020024.8_94575946_94626513_1	chr10	+	2121	10	ISM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	51430	202	51430	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGTCATTGTATAGAC	NA	NA	NA	NA	NA	NA	NA	NA	94575945	94626513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ENSMUSG00000020027.19_95247891_95250771_1	chr10	-	1161	2	FSM	ENSMUSG00000020027.19	ENSMUST00000119917.2	948	2	374	-587	374	-539	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAACG	NA	NA	NA	NA	NA	NA	NA	NA	95250771	95247890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_95248973_95250692
ENSMUSG00000020027.19_95248030_95251145_1	chr10	-	1396	2	FSM	ENSMUSG00000020027.19	ENSMUST00000119917.2	948	2	0	-448	0	448	multi-exon	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCCTGGGGTTCAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	95251145	95248029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_95248973_95250692
ENSMUSG00000020027.19_95248282_95252074_1	chr10	-	1265	3	FSM	ENSMUSG00000020027.19	ENSMUST00000170690.8	2195	3	0	930	0	196	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCTGCTCAAGATCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	95252074	95248281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_95248973_95250692_95251054_95251861
ENSMUSG00000020027.19_95248282_95252590_1	chr10	-	1163	3	FSM	ENSMUSG00000020027.19	ENSMUST00000020215.16	2222	3	129	930	129	196	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCTGCTCAAGATCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	95252590	95248281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_95248973_95250692_95251054_95252479
ENSMUSG00000020027.19_95248282_95252719_1	chr10	-	1292	3	FSM	ENSMUSG00000020027.19	ENSMUST00000020215.16	2222	3	0	930	0	196	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCTGCTCAAGATCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	95252719	95248281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_95248973_95250692_95251054_95252479
ENSMUSG00000020029.7_95384997_95385690_1	chr10	-	409	2	ISM	ENSMUSG00000020029.7	ENST00000547014.5	893	4	2768	293	2768	153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAACAAAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	95385690	95384996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_95385353_95385637
ENSMUSG00000020029.7_95385028_95385726_1	chr10	-	410	2	NNC	ENSMUSG00000020029.7	novel	893	4	NA	NA	2732	122	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTATTTCATCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	95385726	95385027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_95385349_95385637
ENSMUSG00000020029.7_95385149_95399578_2	chr10	-	493	5	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	42	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGGGGTCCCTCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	95399578	95385148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_95385353_95385637_95385723_95387310_95387349_95388347_95388459_95399523
ENSMUSG00000020029.7_95385149_95399578_3	chr10	-	500	5	FSM	ENSMUSG00000020029.7	ENSMUST00000020217.7	3210	5	430	2280	42	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGGGGTCCCTCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	95399578	95385148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523
ENSMUSG00000020034.8_84412490_84430613_1	chr10	+	1275	6	ISM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	0	19610	0	-19610	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATTCCAGGAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	84412489	84430613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_84412877_84420611_84420920_84422967_84423104_84425747_84425869_84426951_84427173_84430511
ENSMUSG00000020034.8_84412761_84440552_1	chr10	+	1221	7	ISM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	271	9671	271	-9671	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGGCTTTGTCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	84412760	84440552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_84412877_84420611_84420920_84422967_84423104_84425747_84425869_84426951_84427173_84430511_84430649_84440370
ENSMUSG00000020034.8_84420756_84444383_1	chr10	+	1198	8	ISM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	8266	5840	8266	-5840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACAAGGCCCTGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	84420755	84444383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_84420920_84422967_84423104_84425747_84425869_84426951_84427173_84430511_84430649_84440370_84440553_84440749_84440932_84444328
ENSMUSG00000020034.8_84420825_84444462_1	chr10	+	1208	8	ISM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	8335	5761	8335	-5761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTTGAAGAGAAGGACAAT	NA	NA	NA	NA	NA	NA	NA	NA	84420824	84444462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_84420920_84422967_84423104_84425747_84425869_84426951_84427173_84430511_84430649_84440370_84440553_84440749_84440932_84444328
ENSMUSG00000020034.8_84422997_84449439_1	chr10	+	1217	8	ISM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	10507	784	10507	-784	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGAGCTGGAAGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	84422996	84449439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_84423104_84425747_84425869_84426951_84427173_84430511_84430649_84440370_84440553_84440749_84440932_84444328_84444502_84449345
ENSMUSG00000020034.8_84426950_84449692_1	chr10	+	1244	6	ISM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	14460	531	14460	-531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGTAATGGATGCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	84426949	84449692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_84427173_84430511_84430649_84440370_84440553_84440749_84440932_84444328_84444502_84449345
ENSMUSG00000020034.8_84427029_84449731_1	chr10	+	1204	6	ISM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	14539	492	14539	-492	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTTGTGTTTAAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	84427028	84449731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_84427173_84430511_84430649_84440370_84440553_84440749_84440932_84444328_84444502_84449345
ENSMUSG00000020034.8_84427089_84449786_1	chr10	+	1199	6	ISM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	14599	437	14599	-437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTACCTATATAACATT	NA	NA	NA	NA	NA	NA	NA	NA	84427088	84449786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_84427173_84430511_84430649_84440370_84440553_84440749_84440932_84444328_84444502_84449345
ENSMUSG00000020034.8_84430517_84449906_1	chr10	+	1230	5	ISM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	18027	317	18027	-317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGACTTGTTCATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	84430516	84449906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_84430649_84440370_84440553_84440749_84440932_84444328_84444502_84449345
ENSMUSG00000020034.8_84430517_84449957_1	chr10	+	1281	5	ISM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	18027	266	18027	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTATACTGCAGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	84430516	84449957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_84430649_84440370_84440553_84440749_84440932_84444328_84444502_84449345
ENSMUSG00000020034.8_84440438_84450068_1	chr10	+	1193	4	ISM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	27948	155	27948	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGATATGGATTTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	84440437	84450068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_84440553_84440749_84440932_84444328_84444502_84449345
ENSMUSG00000020034.8_84440495_84450223_1	chr10	+	1291	4	ISM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	28005	0	28005	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAATCTTTTCATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	84440494	84450223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_84440553_84440749_84440932_84444328_84444502_84449345
ENSMUSG00000020038.11_84967564_85020928_1	chr10	-	3020	13	NNC	ENSMUSG00000020038.11	novel	3026	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTGTACTTGTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	85020928	84967563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982514_84982599_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84992949_84993059_85020177
ENSMUSG00000020042.16_85223036_85397544_1	chr10	+	1633	3	ISM	ENSMUSG00000020042.16	ENST00000420571.6	3414	15	284	96669	284	-96669	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCAAGGTCAACCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	85223035	85397544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85224343_85382305_85382456_85397368
ENSMUSG00000020042.16_85223381_85463073_1	chr10	+	1649	6	ISM	ENSMUSG00000020042.16	ENST00000420571.6	3414	15	629	31140	629	-31140	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTACGCCTGCGTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	85223380	85463073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85224343_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060
ENSMUSG00000020042.16_85223813_85469698_1	chr10	+	1641	9	ISM	ENSMUSG00000020042.16	ENST00000420571.6	3414	15	1061	24515	1061	-24515	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTTTGAGATCTTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	85223812	85469698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85224343_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85469547
ENSMUSG00000020042.16_85223993_85481430_1	chr10	+	1674	11	ISM	ENSMUSG00000020042.16	ENST00000420571.6	3414	15	1241	12783	1241	-12783	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTGTTCACAGCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	85223992	85481430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85224343_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85469547_85469727_85476366_85476473_85481351
ENSMUSG00000020042.16_85434265_85494124_1	chr10	+	1918	15	FSM	ENSMUSG00000020042.16	ENST00000357167.8	3568	15	46	1604	0	-89	multi-exon	TRUE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGATGTGCTTCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	85434264	85494124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_85434447_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUSG00000020042.16_85434275_85494124_1	chr10	+	1908	15	FSM	ENSMUSG00000020042.16	ENST00000357167.8	3568	15	56	1604	10	-89	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGATGTGCTTCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	85434274	85494124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_85434447_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUSG00000020042.16_85434275_85494146_1	chr10	+	1930	15	FSM	ENSMUSG00000020042.16	ENST00000357167.8	3568	15	56	1582	10	-67	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGGACGTTGGCCATTA	NA	NA	NA	NA	NA	NA	NA	NA	85434274	85494146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_85434447_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUSG00000020042.16_85460762_85494369_1	chr10	+	1833	13	ISM	ENSMUSG00000020042.16	ENST00000357167.8	3568	15	26543	1359	26497	156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCCGTGTGCTCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	85460761	85494369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUSG00000020042.16_85460876_85494502_1	chr10	+	1852	13	ISM	ENSMUSG00000020042.16	ENST00000357167.8	3568	15	26657	1226	26611	289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGACCATGATCTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	85460875	85494502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUSG00000020042.16_85465112_85494684_1	chr10	+	1851	11	ISM	ENSMUSG00000020042.16	ENST00000357167.8	3568	15	30893	1044	30847	471	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCACATGGCCAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	85465111	85494684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUSG00000020042.16_85467197_85494890_1	chr10	+	1857	9	ISM	ENSMUSG00000020042.16	ENST00000357167.8	3568	15	32978	838	32932	677	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGACAAATTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	85467196	85494890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUSG00000020042.16_85468065_85495076_1	chr10	+	1835	8	ISM	ENSMUSG00000020042.16	ENST00000357167.8	3568	15	33846	652	33800	-652	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCATTTGCATGGACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	85468064	85495076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUSG00000020042.16_85468107_85495136_1	chr10	+	1853	8	ISM	ENSMUSG00000020042.16	ENST00000357167.8	3568	15	33888	592	33842	-592	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGATATGTTCTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	85468106	85495136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUSG00000020042.16_85469585_85495242_1	chr10	+	1855	7	ISM	ENSMUSG00000020042.16	ENST00000357167.8	3568	15	35366	486	35320	-486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTTCATTTCTGATAACT	NA	NA	NA	NA	NA	NA	NA	NA	85469584	85495242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUSG00000020042.16_85469655_85495309_1	chr10	+	1852	7	ISM	ENSMUSG00000020042.16	ENST00000357167.8	3568	15	35436	419	35390	-419	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATCTGTATTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	85469654	85495309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUSG00000020042.16_85476401_85495420_1	chr10	+	1857	6	ISM	ENSMUSG00000020042.16	ENST00000357167.8	3568	15	42182	308	42136	-308	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGAGAGTGTGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	85476400	85495420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUSG00000020042.16_85481412_85495578_1	chr10	+	1883	5	ISM	ENSMUSG00000020042.16	ENST00000357167.8	3568	15	47193	150	47147	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTTTTCTTTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	85481411	85495578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUSG00000020042.16_85487464_85495728_1	chr10	+	1915	3	ISM	ENSMUSG00000020042.16	ENST00000357167.8	3568	15	53245	0	53199	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACAGGAACTTGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	85487463	85495728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_85487540_85490341_85490456_85494003
ENSMUSG00000020044.14_86136571_86179870_1	chr10	+	425	3	ISM	ENSMUSG00000020044.14	ENSMUST00000020234.14	4722	5	335	5500	335	-5500	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGCTAGAAGTCAACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	86136570	86179870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_86136839_86174236_86174320_86179796
ENSMUSG00000020044.14_86136793_86181617_1	chr10	+	412	5	FSM	ENSMUSG00000020044.14	ENSMUST00000020234.14	4722	5	557	3753	557	-3753	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACCGACATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	86136792	86181617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_86136839_86174236_86174320_86179796_86179909_86180417_86180540_86181568
ENSMUSG00000020048.14_86526704_86538957_1	chr10	-	2445	15	ISM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	2416	0	2416	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2901	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	NA	NA	NA	NA	NA	NA	NA	86538957	86526703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772
ENSMUSG00000020048.14_86526824_86539372_1	chr10	-	2306	16	ISM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	2001	120	2001	-54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGTTTTTTTAGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	86539372	86526823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323
ENSMUSG00000020048.14_86526864_86539447_1	chr10	-	2341	16	ISM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	1926	160	1926	-94	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4732	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCACTGTAAAATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	86539447	86526863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323
ENSMUSG00000020048.14_86526871_86539422_1	chr10	-	2303	16	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	1951	-101	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2160	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTCCCCTGCACTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	86539422	86526870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_86526993_86527492_86527607_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323
ENSMUSG00000020048.14_86526875_86530243_1	chr10	-	730	6	ISM	ENSMUSG00000020048.14	ENST00000614327.2	2608	17	11135	105	11130	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTTCTCCCCTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	86530243	86526874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_86526993_86527492_86527613_86528249_86528329_86529240_86529378_86529777_86530024_86530213
ENSMUSG00000020048.14_86526927_86540181_1	chr10	-	2320	17	ISM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	1192	223	1192	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTTTGAAGTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	86540181	86526926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157
ENSMUSG00000020048.14_86526929_86530290_1	chr10	-	723	6	ISM	ENSMUSG00000020048.14	ENST00000614327.2	2608	17	11088	159	11083	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAGTTTTGAAGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	86530290	86526928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_86526993_86527492_86527613_86528249_86528329_86529240_86529378_86529777_86530024_86530213
ENSMUSG00000020048.14_86526974_86530347_1	chr10	-	735	6	ISM	ENSMUSG00000020048.14	ENST00000614327.2	2608	17	11031	204	11026	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTAAATTATACTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	86530347	86526973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_86526993_86527492_86527613_86528249_86528329_86529240_86529378_86529777_86530024_86530213
ENSMUSG00000020048.14_86527547_86541312_1	chr10	-	2421	17	ISM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	61	843	61	-777	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAGAAGAGATGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	86541312	86527546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ENSMUSG00000020048.14_86527565_86530461_1	chr10	-	758	5	ISM	ENSMUSG00000020048.14	ENST00000614327.2	2608	17	10917	795	10912	-795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACTCAGAGCAGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	86530461	86527564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_86527613_86528249_86528329_86529240_86529378_86529777_86530024_86530213
ENSMUSG00000020053.19_87694930_87766776_1	chr10	+	788	6	NNC	ENSMUSG00000020053.19	novel	765	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTAAAAAGCTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	87694929	87766776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_87695007_87695192_87695275_87700592_87700750_87749482_87749663_87751159_87751212_87766536
ENSMUSG00000020053.19_87694930_87766776_2	chr10	+	790	6	FSM	ENSMUSG00000020053.19	ENST00000392904.5	765	6	-25	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTAAAAAGCTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	87694929	87766776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_87695007_87695192_87695275_87700592_87700750_87749480_87749663_87751159_87751212_87766536
ENSMUSG00000020056.17_88036955_88082022_1	chr10	+	1047	7	NNC	ENSMUSG00000020056.17	novel	1052	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATGTGTCTTAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	88036954	88082022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_88037155_88037680_88037773_88049508_88049575_88051828_88051937_88055111_88055223_88070255_88070321_88081617
ENSMUSG00000020057.3_88160058_88192858_1	chr10	-	1004	4	NNC	ENSMUSG00000020057.3	novel	936	4	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGCATTAAACAAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	88192858	88160057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_88160648_88176381_88176525_88180507_88180574_88192653
ENSMUSG00000020057.3_88160058_88192858_2	chr10	-	1006	4	FSM	ENSMUSG00000020057.3	ENST00000544152.5	936	4	-70	0	-70	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGCATTAAACAAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	88192858	88160057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_88160648_88176381_88176525_88180505_88180574_88192653
ENSMUSG00000020057.3_88160058_88192858_3	chr10	-	1000	4	NNC	ENSMUSG00000020057.3	novel	936	4	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGCATTAAACAAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	88192858	88160057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_88160648_88176381_88176519_88180505_88180574_88192653
ENSMUSG00000020057.3_88160058_88192858_4	chr10	-	998	4	NNC	ENSMUSG00000020057.3	novel	936	4	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGCATTAAACAAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	88192858	88160057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_88160648_88176381_88176525_88180505_88180566_88192653
ENSMUSG00000020061.19_88354144_88440887_1	chr10	-	3862	30	FSM	ENSMUSG00000020061.19	ENST00000452455.6	3869	30	2	5	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTTGTGCTGTCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	88440887	88354143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_88354432_88357138_88357198_88358828_88359016_88360830_88360968_88362143_88362304_88365286_88365427_88367530_88367727_88369346_88369436_88372176_88372345_88373327_88373382_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477_88391603_88394432_88394566_88396085_88396253_88402369_88402427_88404459_88404512_88406400_88406519_88407381_88407531_88409277_88409392_88417868_88417911_88421521_88421558_88440762
ENSMUSG00000020061.19_88357139_88390631_1	chr10	-	2402	17	ISM	ENSMUSG00000020061.19	ENST00000536007.5	3436	27	50229	0	-16886	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAATAAGTCCACCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	88390631	88357138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88357198_88358828_88359016_88360830_88360968_88362143_88362304_88365286_88365427_88367530_88367727_88369346_88369436_88372176_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525
ENSMUSG00000020061.19_88357168_88391500_1	chr10	-	2396	18	ISM	ENSMUSG00000020061.19	ENST00000536007.5	3436	27	49360	29	-17755	-29	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTCTCCCTGGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	88391500	88357167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88357198_88358828_88359016_88360830_88360968_88362143_88362304_88365286_88365427_88367530_88367727_88369346_88369436_88372176_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477
ENSMUSG00000020061.19_88358829_88391602_1	chr10	-	2468	17	ISM	ENSMUSG00000020061.19	ENST00000536007.5	3436	27	49258	1690	-17857	-1690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACGCCAACTAAGAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	88391602	88358828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88359016_88360830_88360968_88362143_88362304_88365286_88365427_88367530_88367727_88369346_88369436_88372176_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477
ENSMUSG00000020061.19_88358977_88394494_1	chr10	-	2382	18	ISM	ENSMUSG00000020061.19	ENST00000536007.5	3436	27	46366	1838	-20749	-1838	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGACCCAAGATACAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	88394494	88358976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88359016_88360830_88360968_88362143_88362304_88365286_88365427_88367530_88367727_88369346_88369436_88372176_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477_88391603_88394432
ENSMUSG00000020061.19_88360844_88396102_1	chr10	-	2418	18	ISM	ENSMUSG00000020061.19	ENST00000536007.5	3436	27	44758	3705	-22357	-3705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAATCCCAAGGTACCAT	NA	NA	NA	NA	NA	NA	NA	NA	88396102	88360843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88360968_88362143_88362304_88365286_88365427_88367530_88367727_88369346_88369436_88372176_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477_88391603_88394432_88394566_88396085
ENSMUSG00000020061.19_88360884_88396171_1	chr10	-	2447	18	ISM	ENSMUSG00000020061.19	ENST00000536007.5	3436	27	44689	3745	-22426	-3745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCGCTGGTTACAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	88396171	88360883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88360968_88362143_88362304_88365286_88365427_88367530_88367727_88369346_88369436_88372176_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477_88391603_88394432_88394566_88396085
ENSMUSG00000020061.19_88362235_88406436_1	chr10	-	2441	19	ISM	ENSMUSG00000020061.19	ENST00000536007.5	3436	27	34424	5096	-32691	-5096	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATTACTTCCGGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	88406436	88362234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88362304_88365286_88365427_88367530_88367727_88369346_88369436_88372176_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477_88391603_88394432_88394566_88396085_88396253_88404459_88404512_88406400
ENSMUSG00000020061.19_88365286_88406519_1	chr10	-	2456	18	ISM	ENSMUSG00000020061.19	ENST00000536007.5	3436	27	34341	8147	-32774	-8147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTGGCTTCTGATCCA	NA	NA	NA	NA	NA	NA	NA	NA	88406519	88365285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88365427_88367530_88367727_88369346_88369436_88372176_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477_88391603_88394432_88394566_88396085_88396253_88404459_88404512_88406400
ENSMUSG00000020061.19_88365410_88407426_1	chr10	-	2376	19	ISM	ENSMUSG00000020061.19	ENST00000536007.5	3436	27	33434	8271	33434	-8271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACTGTGACTATTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	88407426	88365409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88365427_88367530_88367727_88369346_88369436_88372176_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477_88391603_88394432_88394566_88396085_88396253_88404459_88404512_88406400_88406519_88407381
ENSMUSG00000020061.19_88367531_88407531_1	chr10	-	2464	18	ISM	ENSMUSG00000020061.19	ENST00000536007.5	3436	27	33329	10392	33329	-10392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTTGCAGGACAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	88407531	88367530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88367727_88369346_88369436_88372176_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477_88391603_88394432_88394566_88396085_88396253_88404459_88404512_88406400_88406519_88407381
ENSMUSG00000020061.19_88367559_88373491_1	chr10	-	589	4	ISM	ENSMUSG00000020061.19	ENST00000549608.1	1722	9	254	13354	254	-10420	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTCTATCGACATCCA	NA	NA	NA	NA	NA	NA	NA	NA	88373491	88367558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88367727_88369346_88369436_88372176_88372345_88373327
ENSMUSG00000020061.19_88367671_88409337_1	chr10	-	2383	19	ISM	ENSMUSG00000020061.19	ENST00000536007.5	3436	27	31523	10532	31523	-10532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATAAACATTCGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	88409337	88367670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88367727_88369346_88369436_88372176_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477_88391603_88394432_88394566_88396085_88396253_88404459_88404512_88406400_88406519_88407381_88407531_88409277
ENSMUSG00000020061.19_88369342_88421558_1	chr10	-	2465	20	ISM	ENSMUSG00000020061.19	ENST00000536007.5	3436	27	19302	12203	19302	-12203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACACACCTCTTATTAG	NA	NA	NA	NA	NA	NA	NA	NA	88421558	88369341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88369436_88372176_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477_88391603_88394432_88394566_88396085_88396253_88404459_88404512_88406400_88406519_88407381_88407531_88409277_88409392_88417868_88417911_88421521
ENSMUSG00000020061.19_88372177_88440887_1	chr10	-	2495	20	ISM	ENSMUSG00000020061.19	ENST00000536007.5	3436	27	-27	15038	0	-15038	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGACGGGGTCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	88440887	88372176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477_88391603_88394432_88394566_88396085_88396253_88404459_88404512_88406400_88406519_88407381_88407531_88409277_88409392_88417868_88417911_88421521_88421558_88440762
ENSMUSG00000020063.17_63154837_63161965_1	chr10	-	2874	5	ISM	ENSMUSG00000020063.17	ENST00000403579.1	3124	6	677	46	677	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTTTTAAAGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	63161965	63154836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817
ENSMUSG00000020063.17_63155046_63162563_1	chr10	-	2790	6	FSM	ENSMUSG00000020063.17	ENST00000403579.1	3124	6	79	255	79	-209	multi-exon	FALSE	canonical	NA	NA	NA	NA	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCATTTGCATGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	63162563	63155045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63162438
ENSMUSG00000020063.17_63156454_63167634_1	chr10	-	1368	6	ISM	ENSMUSG00000020063.17	ENST00000432464.5	3173	7	5214	1673	-40	-1617	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGACAGATGTAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	63167634	63156453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523
ENSMUSG00000020063.17_63156572_63172823_1	chr10	-	1357	7	FSM	ENSMUSG00000020063.17	ENST00000432464.5	3173	7	25	1791	25	-1735	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTCTACAATGGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	63172823	63156571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63172758
ENSMUSG00000020063.17_63157597_63167572_1	chr10	-	1072	6	ISM	ENSMUSG00000020063.17	ENST00000406900.5	3126	7	22	2816	22	-2760	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGCAGAAACAGTGAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	63167572	63157596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63162438_63162564_63167523
ENSMUSG00000020064.10_63109309_63147369_1	chr10	+	1919	15	ISM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	29619	6284	29607	-6284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCCCTGGATGATCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	63109308	63147369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245
ENSMUSG00000020064.10_63124872_63153585_1	chr10	+	1984	12	ISM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	45182	68	45170	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCACAGTCATTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	63124871	63153585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ENSMUSG00000020064.10_63124959_63153600_1	chr10	+	1912	12	ISM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	45269	53	45257	-53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTATTTTTCCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	63124958	63153600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ENSMUSG00000020069.17_62850627_62851674_1	chr10	-	961	2	ISM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	7999	184	7952	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTAAGTGCCCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	62851674	62850626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62851494_62851580
ENSMUSG00000020069.17_62850802_62852250_1	chr10	-	946	4	ISM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	7423	359	7376	-359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATGACAGAAAAACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	62852250	62850801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185
ENSMUSG00000020069.17_62850933_62853062_1	chr10	-	948	5	ISM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	6611	490	6564	-490	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGGATTCTAAATATTC	NA	NA	NA	NA	NA	NA	NA	NA	62853062	62850932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000
ENSMUSG00000020069.17_62851331_62854607_1	chr10	-	945	8	ISM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	5066	888	5019	-888	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAACGACTGAAGGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	62854607	62851330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538
ENSMUSG00000020069.17_62851579_62855306_1	chr10	-	989	8	ISM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	4367	1136	4320	-1136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTTGTTTCTGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	62855306	62851578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171
ENSMUSG00000020069.17_62851892_62859626_1	chr10	-	989	8	ISM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	47	1449	0	-1449	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAATGGGAGGCTATGGC	NA	NA	NA	NA	NA	NA	NA	NA	62859626	62851891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859498
ENSMUSG00000020074.8_62580112_62589192_1	chr10	-	1582	8	ISM	ENSMUSG00000020074.8	ENST00000630771.2	3771	24	38864	0	38818	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTAATATTTTCAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	62589192	62580111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952
ENSMUSG00000020074.8_62580241_62592307_1	chr10	-	1499	9	ISM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	35758	0	35703	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGTCTTTTATTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	62592307	62580240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261
ENSMUSG00000020074.8_62580241_62592361_1	chr10	-	1553	9	ISM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	35704	0	35649	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGTCTTTTATTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	62592361	62580240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261
ENSMUSG00000020074.8_62580241_62592422_1	chr10	-	1614	9	ISM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	35643	0	35588	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGTCTTTTATTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	62592422	62580240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261
ENSMUSG00000020074.8_62580461_62595975_1	chr10	-	1528	10	ISM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	32090	220	32035	-220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTGACTTTAGTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	62595975	62580460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872
ENSMUSG00000020074.8_62581116_62601115_1	chr10	-	1550	11	ISM	ENSMUSG00000020074.8	ENST00000630771.2	3771	24	26941	1004	26895	-75	internal_fragment	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAAACCAATTGAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	62601115	62581115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045
ENSMUSG00000020074.8_62581187_62601148_1	chr10	-	1512	11	ISM	ENSMUSG00000020074.8	ENST00000630771.2	3771	24	26908	1075	26862	-146	internal_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAGAGGTCAAAAAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	62601148	62581186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045
ENSMUSG00000020074.8_62581233_62601204_1	chr10	-	1522	11	ISM	ENSMUSG00000020074.8	ENST00000630771.2	3771	24	26852	1121	26806	-192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATTAAACTTGGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	62601204	62581232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045
ENSMUSG00000020074.8_62582737_62601806_1	chr10	-	1544	11	ISM	ENSMUSG00000020074.8	ENST00000630771.2	3771	24	26250	2625	26204	-1696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGAAAGTAAGAGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	62601806	62582736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720
ENSMUSG00000020074.8_62582847_62602411_1	chr10	-	1538	12	ISM	ENSMUSG00000020074.8	ENST00000630771.2	3771	24	25645	2735	25599	-1806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACACCAACAATAAAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	62602411	62582846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335
ENSMUSG00000020074.8_62586408_62606689_1	chr10	-	1522	11	ISM	ENSMUSG00000020074.8	ENST00000630771.2	3771	24	21367	6296	21321	-5367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTCATTGCGGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	62606689	62586407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633
ENSMUSG00000020074.8_62586758_62600201_1	chr10	-	951	7	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	27850	5717	27809	-5717	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTCAGCCGGTACTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	62600201	62586757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102
ENSMUSG00000020074.8_62587522_62607847_1	chr10	-	1616	10	ISM	ENSMUSG00000020074.8	ENST00000630771.2	3771	24	20209	7410	20163	-6481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTATGCATCAGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	62607847	62587521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714
ENSMUSG00000020074.8_62589052_62601117_1	chr10	-	886	6	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	26934	8011	26893	-8011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAGAAAGAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	62601117	62589051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045
ENSMUSG00000020074.8_62589052_62601171_1	chr10	-	940	6	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	26880	8011	26839	-8011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAGAAAGAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	62601171	62589051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045
ENSMUSG00000020074.8_62589052_62612414_1	chr10	-	1470	10	ISM	ENSMUSG00000020074.8	ENST00000630771.2	3771	24	15642	8940	15596	-8011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAGAAAGAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	62612414	62589051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346
ENSMUSG00000020074.8_62589052_62612475_1	chr10	-	1531	10	ISM	ENSMUSG00000020074.8	ENST00000630771.2	3771	24	15581	8940	15535	-8011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAGAAAGAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	62612475	62589051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346
ENSMUSG00000020074.8_62589052_62612541_1	chr10	-	1597	10	ISM	ENSMUSG00000020074.8	ENST00000630771.2	3771	24	15515	8940	15469	-8011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAGAAAGAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	62612541	62589051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346
ENSMUSG00000020074.8_62589159_62601212_1	chr10	-	874	6	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	26839	8118	26798	-8118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGAGACTTTGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	62601212	62589158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045
ENSMUSG00000020074.8_62592341_62602368_1	chr10	-	908	7	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	25683	11300	25642	-11300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTGATTGCAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	62602368	62592340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335
ENSMUSG00000020074.8_62592352_62616257_1	chr10	-	1517	11	ISM	ENSMUSG00000020074.8	ENST00000630771.2	3771	24	11799	12240	11753	-11311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAAAGTGGCAAGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	62616257	62592351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219
ENSMUSG00000020074.8_62592389_62602421_1	chr10	-	913	7	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	25630	11348	25589	-11348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGAACCTGCCATAATTG	NA	NA	NA	NA	NA	NA	NA	NA	62602421	62592388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335
ENSMUSG00000020074.8_62592407_62616315_1	chr10	-	1520	11	ISM	ENSMUSG00000020074.8	ENST00000630771.2	3771	24	11741	12295	11695	-11366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGATACATTTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	62616315	62592406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219
ENSMUSG00000020074.8_62595872_62602561_1	chr10	-	989	6	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	25490	14831	25449	-14831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAGTCCATTTGCATAC	NA	NA	NA	NA	NA	NA	NA	NA	62602561	62595871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335
ENSMUSG00000020074.8_62595983_62619707_1	chr10	-	1540	12	ISM	ENSMUSG00000020074.8	ENST00000630771.2	3771	24	8349	15871	8303	-14942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAAAGCAGCTTAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	62619707	62595982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661
ENSMUSG00000020074.8_62596028_62606694_1	chr10	-	894	7	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	21357	14987	21316	-14987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTCTCAGTTCCAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	62606694	62596027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633
ENSMUSG00000020074.8_62599211_62606795_1	chr10	-	972	6	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	21256	18170	21215	-18170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAGACATATATATTG	NA	NA	NA	NA	NA	NA	NA	NA	62606795	62599210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633
ENSMUSG00000020074.8_62599211_62621281_1	chr10	-	1543	12	ISM	ENSMUSG00000020074.8	ENST00000630771.2	3771	24	6775	19099	6729	-18170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAGACATATATATTG	NA	NA	NA	NA	NA	NA	NA	NA	62621281	62599210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209
ENSMUSG00000020074.8_62600253_62612415_1	chr10	-	929	7	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	15636	19212	15595	-19212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTCATGTGGAGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	62612415	62600252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346
ENSMUSG00000020074.8_62601070_62626717_1	chr10	-	1537	12	ISM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	1348	20829	1293	-20029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCTAAGTGTATGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	62626717	62601069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699
ENSMUSG00000020074.8_62601138_62626759_1	chr10	-	1511	12	ISM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	1306	20897	1251	-20097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCCAGAAAAAGATCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	62626759	62601137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699
ENSMUSG00000020074.8_62607805_62628049_1	chr10	-	922	8	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	2	26764	2	-26764	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCTGCGCGGAGATTAG	NA	NA	NA	NA	NA	NA	NA	NA	62628049	62607804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62621209_62621374_62626699_62626822_62627988
ENSMUSG00000020075.9_62418286_62421451_1	chr10	-	429	4	ISM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	16609	2256	16609	-2256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCAGCCGTGGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	62421451	62418285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303
ENSMUSG00000020075.9_62420459_62423878_1	chr10	-	416	4	ISM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	14182	4429	14182	-4429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATCGATGCCAAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	62423878	62420458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62420545_62421303_62421464_62423242_62423317_62423782
ENSMUSG00000020075.9_62421342_62424534_1	chr10	-	415	4	ISM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	13526	5312	13526	-5312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTCGATCAGCGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	62424534	62421341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62421464_62423242_62423317_62423782_62423903_62424435
ENSMUSG00000020075.9_62423867_62426461_1	chr10	-	410	4	ISM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	11599	7837	11599	-7837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGAGCTGGAAGGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	62426461	62423866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62423903_62424435_62424598_62425556_62425707_62426399
ENSMUSG00000020075.9_62426495_62429812_1	chr10	-	427	4	ISM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	8248	10465	8248	-10465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTTTAATGTTGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	62429812	62426494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62426546_62427595_62427782_62428788_62428907_62429740
ENSMUSG00000020075.9_62434393_62438060_1	chr10	-	432	2	ISM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	0	18363	0	-18363	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACATGCCTAAGCCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	62438060	62434392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62434671_62437906
ENSMUSG00000020076.8_62451794_62478733_1	chr10	-	1977	12	ISM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	8264	0	8264	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGAGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	62478733	62451793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554
ENSMUSG00000020076.8_62451794_62479151_1	chr10	-	2053	13	ISM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	7846	0	7846	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGAGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	62479151	62451793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075
ENSMUSG00000020076.8_62452005_62479151_1	chr10	-	1842	13	ISM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	7846	211	7846	-211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTCCAGTGTGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	62479151	62452004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075
ENSMUSG00000020076.8_62452119_62482907_1	chr10	-	1943	14	ISM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	4090	325	4090	-325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGACAGGGAAGTCGGTC	NA	NA	NA	NA	NA	NA	NA	NA	62482907	62452118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692
ENSMUSG00000020076.8_62452231_62486952_1	chr10	-	2053	15	FSM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	45	437	45	-437	multi-exon	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGATGGAAACACATCAT	NA	NA	NA	NA	NA	NA	NA	NA	62486952	62452230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
ENSMUSG00000020076.8_62452266_62486954_1	chr10	-	2020	15	FSM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	43	472	43	-472	multi-exon	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGCCAGCCAAATTACC	NA	NA	NA	NA	NA	NA	NA	NA	62486954	62452265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
ENSMUSG00000020078.17_62291051_62322584_1	chr10	-	2593	9	NNC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTTGTAGTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	62322584	62291050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322445
ENSMUSG00000020078.17_62291051_62322584_2	chr10	-	2595	9	NNC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTTGTAGTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	62322584	62291050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_62292638_62294702_62294846_62299469_62299532_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ENSMUSG00000020078.17_62291051_62322584_3	chr10	-	2592	9	NNC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	879	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTTGTAGTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	62322584	62291050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306905_62316336_62316487_62322436
ENSMUSG00000020078.17_62291051_62322584_4	chr10	-	2593	9	NNC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTTGTAGTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	62322584	62291050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306847_62306915_62316336_62316487_62322436
ENSMUSG00000020078.17_62291051_62322584_5	chr10	-	2596	9	NNC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTTGTAGTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	62322584	62291050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304074_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ENSMUSG00000020079.16_62265364_62268155_1	chr10	-	487	3	ISM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	17362	376	17362	-376	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTGACAAGGAGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	62268155	62265363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62265614_62266249_62266399_62268067
ENSMUSG00000020079.16_62265539_62268906_1	chr10	-	477	4	ISM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	16611	551	16611	-551	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGCGTGCACAACATCA	NA	NA	NA	NA	NA	NA	NA	NA	62268906	62265538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830
ENSMUSG00000020079.16_62266268_62270234_1	chr10	-	450	4	ISM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	15283	1280	15283	-1280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTACCTGTGGCTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	62270234	62266267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62266399_62268067_62268245_62268830_62268912_62270173
ENSMUSG00000020079.16_62266361_62270370_1	chr10	-	493	4	ISM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	15147	1373	15147	-1373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGCTACGCCGGTACA	NA	NA	NA	NA	NA	NA	NA	NA	62270370	62266360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62266399_62268067_62268245_62268830_62268912_62270173
ENSMUSG00000020079.16_62268843_62271499_1	chr10	-	458	4	ISM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	14018	3855	14018	-3855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATCTCATTGTAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	62271499	62268842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62268912_62270173_62270394_62271237_62271332_62271424
ENSMUSG00000020079.16_62268889_62271582_1	chr10	-	495	4	ISM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	13935	3901	13935	-3901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCAGATTGAGATGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	62271582	62268888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62268912_62270173_62270394_62271237_62271332_62271424
ENSMUSG00000020079.16_62270320_62274776_1	chr10	-	465	5	ISM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	10741	5332	10741	-5332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCACCACCTCCCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	62274776	62270319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752
ENSMUSG00000020079.16_62271530_62279267_1	chr10	-	452	5	ISM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	6250	6542	6250	-6542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTGCATTGTCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	62279267	62271529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173
ENSMUSG00000020079.16_62273274_62280875_1	chr10	-	448	5	ISM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	4642	8286	4642	-8286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCTGCTGCTATTAACC	NA	NA	NA	NA	NA	NA	NA	NA	62280875	62273273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817
ENSMUSG00000020079.16_62276938_62282890_1	chr10	-	460	4	ISM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	2627	11950	2627	-11950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGCAATGTTGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	62282890	62276937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62277026_62279173_62279343_62280817_62280933_62282802
ENSMUSG00000020079.16_62279269_62285267_1	chr10	-	449	5	ISM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	250	14281	250	-14281	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCATCCAGAGATACCTG	NA	NA	NA	NA	NA	NA	NA	NA	62285267	62279268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ENSMUSG00000020085.16_61561684_61574045_1	chr10	+	2626	8	ISM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	10582	381	5256	-381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGCCTTTGGTTATAG	NA	NA	NA	NA	NA	NA	NA	NA	61561683	61574045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361
ENSMUSG00000020085.16_61561749_61574099_1	chr10	+	2615	8	ISM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	10647	327	5321	-327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCCAGCCCATCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	61561748	61574099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361
ENSMUSG00000020085.16_61562181_61574223_1	chr10	+	2617	7	ISM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	11079	203	5753	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACCAGCCAGGAAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	61562180	61574223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361
ENSMUSG00000020085.16_61563473_61574426_1	chr10	+	2694	6	ISM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	12371	0	7045	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGACGCTGGAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	61563472	61574426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361
ENSMUSG00000020086.7_61574864_61576973_1	chr10	-	438	2	ISM	ENSMUSG00000020086.7	ENST00000677881.1	1626	6	16759	427	16759	-420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGTCTCCACCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	61576973	61574863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61575242_61576913
ENSMUSG00000020086.7_61574927_61577029_1	chr10	-	431	2	ISM	ENSMUSG00000020086.7	ENST00000677881.1	1626	6	16703	490	16703	-483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTGAAGGGGTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	61577029	61574926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61575242_61576913
ENSMUSG00000020086.7_61575054_61582481_1	chr10	-	433	3	ISM	ENSMUSG00000020086.7	ENST00000679349.1	2083	10	37232	617	11251	-610	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGATCGGCGTGACGTC	NA	NA	NA	NA	NA	NA	NA	NA	61582481	61575053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61575242_61576913_61577089_61582411
ENSMUSG00000020086.7_61575060_61583490_1	chr10	-	487	4	ISM	ENSMUSG00000020086.7	ENST00000679349.1	2083	10	36223	623	10242	-616	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGGAGGAGGATCGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	61583490	61575059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450
ENSMUSG00000020086.7_61575200_61585094_1	chr10	-	447	5	ISM	ENSMUSG00000020086.7	ENST00000679349.1	2083	10	34619	763	8638	-756	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCATCTCGGCTCACTTCG	NA	NA	NA	NA	NA	NA	NA	NA	61585094	61575199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054
ENSMUSG00000020086.7_61576961_61587478_1	chr10	-	452	5	ISM	ENSMUSG00000020086.7	ENST00000679349.1	2083	10	32235	2524	6254	-2517	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGAAGCTTAAATCCGT	NA	NA	NA	NA	NA	NA	NA	NA	61587478	61576960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455
ENSMUSG00000020086.7_61577014_61587537_1	chr10	-	458	5	ISM	ENSMUSG00000020086.7	ENST00000679349.1	2083	10	32176	2577	6195	-2570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGAAGAACAGCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	61587537	61577013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455
ENSMUSG00000020086.7_61577047_61587610_1	chr10	-	498	5	ISM	ENSMUSG00000020086.7	ENST00000679349.1	2083	10	32103	2610	6122	-2603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGTCACATCCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	61587610	61577046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455
ENSMUSG00000020086.7_61587589_61617748_1	chr10	-	481	4	ISM	ENSMUSG00000020086.7	ENST00000679349.1	2083	10	1965	13152	1965	-13145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAGCGAGGGACCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	61617748	61587588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61587654_61589240_61589348_61593502_61593734_61617670
ENSMUSG00000020086.7_61589285_61619629_1	chr10	-	362	3	ISM	ENSMUSG00000020086.7	ENSMUST00000020283.5	2175	9	297	14841	84	-14841	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACATCCTGCTGGCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	61619629	61589284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61589348_61593502_61593734_61619561
ENSMUSG00000020086.7_61589326_61619699_1	chr10	-	391	3	ISM	ENSMUSG00000020086.7	ENSMUST00000020283.5	2175	9	227	14882	14	-14882	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGCTGCGAGGGACAACA	NA	NA	NA	NA	NA	NA	NA	NA	61619699	61589325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61589348_61593502_61593734_61619561
ENSMUSG00000020086.7_61593625_61619804_1	chr10	-	352	2	ISM	ENSMUSG00000020086.7	ENSMUST00000020283.5	2175	9	122	19181	-91	-19181	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCCGGCGTCATCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	61619804	61593624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61593734_61619561
ENSMUSG00000020087.6_61532426_61535407_1	chr10	+	413	3	ISM	ENSMUSG00000020087.6	ENSMUST00000020284.5	2286	4	1133	3145	1052	-2867	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTAGCTCCTTTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	61532425	61535407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_61532522_61534076_61534208_61535221
ENSMUSG00000020087.6_61532489_61538015_1	chr10	+	236	2	FSM	ENSMUSG00000020087.6	ENST00000335494.5	1610	2	1115	259	1115	-259	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGCAAGCTCTGAAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	61532488	61538015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_61532522_61537812
ENSMUSG00000020088.11_61516109_61529076_1	chr10	+	2585	7	NNC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	61516108	61529076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_61516193_61520658_61520725_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ENSMUSG00000020088.11_61516109_61529076_2	chr10	+	2587	7	NNC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	61516108	61529076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_61516193_61520658_61520733_61520844_61520965_61521338_61521399_61522153_61522258_61525552_61525685_61527063
ENSMUSG00000020088.11_61516109_61529076_3	chr10	+	2589	7	NNC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	61516108	61529076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_61516197_61520666_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ENSMUSG00000020089.9_61484400_61509611_1	chr10	+	959	11	FSM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	69	336	69	-336	multi-exon	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATCAGCAGAAAAACTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	61484399	61509611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ENSMUSG00000020089.9_61484515_61509656_1	chr10	+	889	11	FSM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	184	291	184	-291	multi-exon	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCGCATCCTGTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	61484514	61509656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ENSMUSG00000020089.9_61484553_61509793_1	chr10	+	988	11	FSM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	222	154	222	-154	multi-exon	FALSE	canonical	NA	NA	NA	NA	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACACCTCACATCTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	61484552	61509793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ENSMUSG00000020089.9_61495226_61509837_1	chr10	+	957	9	ISM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	10895	110	10895	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTCAAAGCCGTGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	61495225	61509837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ENSMUSG00000020089.9_61496765_61509947_1	chr10	+	937	8	ISM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	12434	0	12434	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	61496764	61509947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ENSMUSG00000020097.15_60935011_60938460_1	chr10	-	2012	3	ISM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	44963	590	44963	-590	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGGGATGGTTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	60938460	60935010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60936788_60937459_60937581_60938346
ENSMUSG00000020097.15_60935137_60938975_1	chr10	-	1995	4	ISM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	44448	716	44448	-716	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTCACCCTCCTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	60938975	60935136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899
ENSMUSG00000020097.15_60935400_60940356_1	chr10	-	2010	5	ISM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	43067	979	43067	-979	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGGGATTGGGGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	60940356	60935399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241
ENSMUSG00000020097.15_60935876_60949278_1	chr10	-	2054	10	ISM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	34145	1455	34145	-1455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCACTCCTGAGCCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	60949278	60935875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216
ENSMUSG00000020097.15_60936026_60949869_1	chr10	-	2000	11	ISM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	33554	1605	33554	-1605	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATGGCTGCTGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	60949869	60936025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788
ENSMUSG00000020097.15_60936251_60959253_1	chr10	-	2076	13	ISM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	24170	1830	24170	-1830	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTACCGTGTTCCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	60959253	60936250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087
ENSMUSG00000020097.15_60936369_60982086_1	chr10	-	2008	14	ISM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	1337	1948	1337	-1948	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTAATCATTGTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	60982086	60936368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036
ENSMUSG00000020097.15_60936479_60983383_1	chr10	-	2004	15	FSM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	40	2058	40	-2058	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGAAGACCCTGAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	60983383	60936478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
ENSMUSG00000020099.9_60610192_60667229_1	chr10	-	1909	10	ISM	ENSMUSG00000020099.9	ENSMUST00000077925.7	5869	17	131	11820	-68	-9836	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAGTGTCAGCGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	60667229	60610191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_60610522_60610744_60610940_60612963_60612997_60613168_60613334_60613946_60614115_60614562_60614744_60615446_60615551_60615873_60616018_60618836_60619062_60666865
ENSMUSG00000020107.11_59823419_59826712_1	chr10	-	1300	2	ISM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	12245	188	11879	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCTGGATGACCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	59826712	59823418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_59824661_59826654
ENSMUSG00000020107.11_59823730_59838289_1	chr10	-	1223	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182152.2	847	4	302	-678	302	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGCTGTGCGTATCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	59838289	59823729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838239
ENSMUSG00000020107.11_59823730_59838817_2	chr10	-	1213	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	140	499	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGCTGTGCGTATCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	59838817	59823729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
ENSMUSG00000020107.11_59823730_59838933_1	chr10	-	1329	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	24	499	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGCTGTGCGTATCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	59838933	59823729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
ENSMUSG00000020107.11_59823837_59838817_1	chr10	-	1156	5	FSM	ENSMUSG00000020107.11	ENSMUST00000020307.11	1379	5	116	107	0	-107	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTGAAAATATGAAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	59838817	59823836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838239_59838290_59838777
ENSMUSG00000020107.11_59823937_59838919_1	chr10	-	1158	5	FSM	ENSMUSG00000020107.11	ENSMUST00000020307.11	1379	5	14	207	-11	-207	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTAACATTACAGACTAT	NA	NA	NA	NA	NA	NA	NA	NA	59838919	59823936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838239_59838290_59838777
ENSMUSG00000020109.14_59715448_59733971_1	chr10	+	1818	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	70	1153	0	-372	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGTCGCCCTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	59715447	59733971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
ENSMUSG00000020109.14_59715448_59734052_1	chr10	+	1899	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	70	1072	0	-291	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGGCTTATGGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	59715447	59734052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
ENSMUSG00000020109.14_59715590_59734105_1	chr10	+	1810	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	212	1019	142	-238	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAGATAGCTGCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	59715589	59734105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
ENSMUSG00000020109.14_59725886_59734087_1	chr10	+	1761	8	ISM	ENSMUSG00000020109.14	ENSMUST00000020309.7	2238	9	10438	256	10438	-256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCAGGGAATGGTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	59725885	59734087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732318_59733312
ENSMUSG00000020109.14_59725955_59734187_1	chr10	+	1792	8	ISM	ENSMUSG00000020109.14	ENSMUST00000020309.7	2238	9	10507	156	10507	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTCTGGCCAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	59725954	59734187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732318_59733312
ENSMUSG00000020109.14_59725969_59734343_1	chr10	+	1886	8	ISM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	10591	781	10521	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGCGCACCAAGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	59725968	59734343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
ENSMUSG00000020109.14_59726715_59734343_1	chr10	+	1819	7	ISM	ENSMUSG00000020109.14	ENSMUST00000020309.7	2238	9	11267	0	11267	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGCGCACCAAGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	59726714	59734343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732318_59733312
ENSMUSG00000020109.14_59728531_59734518_1	chr10	+	1816	6	ISM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	13153	606	13083	175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGAGGCTCTTTATCAA	NA	NA	NA	NA	NA	NA	NA	NA	59728530	59734518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
ENSMUSG00000020109.14_59728571_59734598_1	chr10	+	1856	6	ISM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	13193	526	13123	255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGAATTGCCGTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	59728570	59734598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
ENSMUSG00000020109.14_59731442_59734893_1	chr10	+	1820	3	ISM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	16064	231	15994	-225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCTAGAGAGATAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	59731441	59734893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59731583_59732171_59732270_59733312
ENSMUSG00000020109.14_59731517_59734960_1	chr10	+	1812	3	ISM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	16139	164	16069	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTGCCACCCCACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	59731516	59734960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59731583_59732171_59732270_59733312
ENSMUSG00000020109.14_59732172_59735118_1	chr10	+	1904	2	ISM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	16794	6	16724	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGGTGGGTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	59732171	59735118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59732270_59733312
ENSMUSG00000020111.16_59538421_59568917_1	chr10	+	364	3	ISM	ENSMUSG00000020111.16	ENSMUST00000020311.13	2336	14	0	131035	0	-131028	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGGCAGAGCCTTATCCT	NA	NA	NA	NA	NA	NA	NA	NA	59538420	59568917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59538510_59563778_59563941_59568804
ENSMUSG00000020111.16_59563825_59576580_1	chr10	+	390	3	ISM	ENSMUSG00000020111.16	ENSMUST00000092508.12	2294	13	25375	123365	25375	-123365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTTCATGACTCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	59563824	59576580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59563941_59568804_59568980_59576481
ENSMUSG00000020111.16_59568868_59604039_1	chr10	+	399	4	ISM	ENSMUSG00000020111.16	ENSMUST00000179709.8	1814	13	30428	95913	30418	-95906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGACTACATCTTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	59568867	59604039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59568980_59576481_59576645_59586325_59586370_59603959
ENSMUSG00000020111.16_59568893_59623781_1	chr10	+	428	5	ISM	ENSMUSG00000020111.16	ENSMUST00000179709.8	1814	13	30453	76171	30443	-76164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTTTCAAGATGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	59568892	59623781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59568980_59576481_59576645_59586325_59586370_59603959_59604075_59623762
ENSMUSG00000020111.16_59576596_59624760_1	chr10	+	351	5	ISM	ENSMUSG00000020111.16	ENSMUST00000179709.8	1814	13	38156	75192	38146	-75185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGAACACCCTCAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	59576595	59624760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59576645_59586325_59586370_59603959_59604075_59623762_59623846_59624700
ENSMUSG00000020111.16_59604024_59663070_1	chr10	+	392	4	ISM	ENSMUSG00000020111.16	ENSMUST00000092508.12	2294	13	65574	36875	65574	-36875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTACAGTGGAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	59604023	59663070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59604075_59623762_59623846_59624700_59624899_59663010
ENSMUSG00000020111.16_59623819_59675528_1	chr10	+	395	4	ISM	ENSMUSG00000020111.16	ENSMUST00000092508.12	2294	13	85369	24417	85369	-24417	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTTCCTGAAGAACATTA	NA	NA	NA	NA	NA	NA	NA	NA	59623818	59675528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59623846_59624700_59624899_59663010_59663149_59675496
ENSMUSG00000020111.16_59624829_59697444_1	chr10	+	377	4	ISM	ENSMUSG00000020111.16	ENSMUST00000092508.12	2294	13	86379	2501	86379	-2501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGGTGTTCGCGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	59624828	59697444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59624899_59663010_59663149_59675496_59675606_59697384
ENSMUSG00000020111.16_59663043_59699090_1	chr10	+	395	4	ISM	ENSMUSG00000020111.16	ENSMUST00000092508.12	2294	13	124593	855	124593	-855	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCCTCATGCAGGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	59663042	59699090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59663149_59675496_59675606_59697384_59697475_59699000
ENSMUSG00000020114.13_119037744_119045950_1	chr10	-	1882	5	ISM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	30010	2584	30010	-2584	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCATACTGCCTCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	119045950	119037743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878
ENSMUSG00000020114.13_119038735_119047533_1	chr10	-	1889	6	ISM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	28427	3575	28427	-3575	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGTAGCTTTTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	119047533	119038734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559
ENSMUSG00000020114.13_119038855_119047657_1	chr10	-	1893	6	ISM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	28303	3695	28303	-3695	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCGCACAATGCACTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	119047657	119038854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559
ENSMUSG00000020114.13_119044043_119048414_1	chr10	-	1884	5	ISM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	27546	8883	27546	-8883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTTTGAGTGTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	119048414	119044042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344
ENSMUSG00000020114.13_119045894_119049616_1	chr10	-	1882	4	ISM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	26344	10734	26344	-10734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAACTGCATAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	119049616	119045893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_119045975_119046559_119048054_119048344_119048487_119049451
ENSMUSG00000020114.13_119046721_119051218_1	chr10	-	1880	4	ISM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	24742	11561	24742	-11561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTTAAGCCATATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	119051218	119046720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_119048054_119048344_119048487_119049451_119049745_119051106
ENSMUSG00000020114.13_119046825_119052148_1	chr10	-	1911	5	ISM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	23812	11665	23812	-11665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTATCTGCCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	119052148	119046824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047
ENSMUSG00000020114.13_119046957_119052468_1	chr10	-	1897	6	ISM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	23492	11797	23492	-11797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGACACCATATTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	119052468	119046956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355
ENSMUSG00000020114.13_119047086_119052580_1	chr10	-	1880	6	ISM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	23380	11926	23380	-11926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAGCTGCCCTTACTCG	NA	NA	NA	NA	NA	NA	NA	NA	119052580	119047085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355
ENSMUSG00000020114.13_119047292_119055534_1	chr10	-	1870	8	ISM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	20426	12132	20426	-12132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCCTCAATGAACTGATT	NA	NA	NA	NA	NA	NA	NA	NA	119055534	119047291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494
ENSMUSG00000020114.13_119047684_119075606_1	chr10	-	1798	10	ISM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	354	12524	354	-12524	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGGGTCCTGATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	119075606	119047683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ENSMUSG00000020114.13_119047684_119075784_1	chr10	-	1976	10	ISM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	176	12524	176	-12524	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGGGTCCTGATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	119075784	119047683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ENSMUSG00000020114.13_119047915_119075960_1	chr10	-	1921	10	ISM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	0	12755	0	-12755	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGTGTGGGAGACCCGT	NA	NA	NA	NA	NA	NA	NA	NA	119075960	119047914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ENSMUSG00000020115.4_121382360_121400010_1	chr10	-	2045	14	ISM	ENSMUSG00000020115.4	ENST00000677632.1	2717	19	14617	-55	14617	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTGTGCTTTTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	121400010	121382359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389915_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830
ENSMUSG00000020115.4_121382360_121406563_1	chr10	-	2199	16	ISM	ENSMUSG00000020115.4	ENSMUST00000020316.4	3024	21	16129	0	8064	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTGTGCTTTTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	121406563	121382359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535
ENSMUSG00000020115.4_121382360_121406697_1	chr10	-	2261	15	ISM	ENSMUSG00000020115.4	ENST00000652657.1	2700	18	7930	-15	7930	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTGTGCTTTTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	121406697	121382359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121383094_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535
ENSMUSG00000020115.4_121382360_121407844_1	chr10	-	2352	16	NNC	ENSMUSG00000020115.4	novel	3024	21	NA	NA	6783	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTGTGCTTTTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	121407844	121382359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_121383094_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406540_121406697_121407747
ENSMUSG00000020115.4_121382465_121407836_1	chr10	-	2244	16	ISM	ENSMUSG00000020115.4	ENST00000652657.1	2700	18	6791	90	6791	-50	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTCAGATCCTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	121407836	121382464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121383094_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747
ENSMUSG00000020115.4_121382511_121407894_1	chr10	-	2256	16	ISM	ENSMUSG00000020115.4	ENST00000652657.1	2700	18	6733	136	6733	-96	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGTTTAAACTATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	121407894	121382510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121383094_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747
ENSMUSG00000020115.4_121382522_121406614_1	chr10	-	2088	16	ISM	ENSMUSG00000020115.4	ENSMUST00000020316.4	3024	21	16078	162	8013	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTGAATTCATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	121406614	121382521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535
ENSMUSG00000020115.4_121382588_121406683_1	chr10	-	2091	16	ISM	ENSMUSG00000020115.4	ENSMUST00000020316.4	3024	21	16009	228	7944	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGGGTGCCCAAATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	121406683	121382587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535
ENSMUSG00000020115.4_121382622_121412241_1	chr10	-	2242	17	NNC	ENSMUSG00000020115.4	novel	2700	18	NA	NA	2386	192	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCTGACAAGGATAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	121412241	121382621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_121383094_121387391_121387499_121388105_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178
ENSMUSG00000020115.4_121382628_121412292_1	chr10	-	2288	17	ISM	ENSMUSG00000020115.4	ENST00000652657.1	2700	18	2335	253	2335	186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGTTCCCTGACAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	121412292	121382627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121383094_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178
ENSMUSG00000020115.4_121382813_121407930_1	chr10	-	2047	17	ISM	ENSMUSG00000020115.4	ENST00000677632.1	2717	19	6697	398	6697	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTGCTTTGGGGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	121407930	121382812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389915_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747
ENSMUSG00000020115.4_121382813_121412310_1	chr10	-	2090	17	NNC	ENSMUSG00000020115.4	novel	2231	18	NA	NA	2317	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTGCTTTGGGGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	121412310	121382812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389722_121389803_121389930_121391891_121391971_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178
ENSMUSG00000020115.4_121382813_121412310_2	chr10	-	2090	17	NNC	ENSMUSG00000020115.4	novel	2231	18	NA	NA	2317	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTGCTTTGGGGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	121412310	121382812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121395751_121395844_121396145_121396205_121397482_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178
ENSMUSG00000020115.4_121382813_121414567_1	chr10	-	2202	18	FSM	ENSMUSG00000020115.4	ENST00000652657.1	2700	18	60	438	60	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTGCTTTGGGGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	121414567	121382812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_121383094_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484
ENSMUSG00000020115.4_121382813_121414567_2	chr10	-	2172	18	FSM	ENSMUSG00000020115.4	ENST00000650762.1	2231	18	60	-1	60	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTGCTTTGGGGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	121414567	121382812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484
ENSMUSG00000020115.4_121382951_121414528_1	chr10	-	2093	19	NNC	ENSMUSG00000020115.4	novel	3024	21	NA	NA	99	-137	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTCAGTATTTGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	121414528	121382950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412182_121412309_121414484
ENSMUSG00000020115.4_121383011_121414579_1	chr10	-	2084	19	NNC	ENSMUSG00000020115.4	novel	3024	21	NA	NA	48	-197	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAGAAGATAACACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	121414579	121383010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412182_121412309_121414484
ENSMUSG00000020115.4_121383070_121414524_1	chr10	-	1959	19	FSM	ENSMUSG00000020115.4	ENST00000677632.1	2717	19	103	655	103	-256	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTTCGCAATGTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	121414524	121383069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389915_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484
ENSMUSG00000020115.4_121387165_121420168_1	chr10	-	2106	19	NNC	ENSMUSG00000020115.4	novel	3024	21	NA	NA	2524	-4351	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGAAAGGTGAGTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	121420168	121387164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412182_121412309_121414484_121414626_121420100
ENSMUSG00000020115.4_121389848_121400003_1	chr10	-	436	4	ISM	ENSMUSG00000020115.4	ENST00000676930.1	2424	16	14624	7473	14624	-7034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGCACATCAAGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	121400003	121389847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121389930_121391891_121391971_121393106_121393209_121399830
ENSMUSG00000020115.4_121389906_121400010_1	chr10	-	385	4	ISM	ENSMUSG00000020115.4	ENST00000676930.1	2424	16	14617	7531	14617	-7092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCAGTCTTCAGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	121400010	121389905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121389930_121391891_121391971_121393106_121393209_121399830
ENSMUSG00000020116.8_17153198_17159137_1	chr11	-	1054	4	ISM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	2431	0	2431	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCAGTCTCTTTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	17159137	17153197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076
ENSMUSG00000020116.8_17153302_17159383_1	chr11	-	1023	5	ISM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	2185	104	2185	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATTAAACATGTAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	17159383	17153301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310
ENSMUSG00000020116.8_17153513_17161137_1	chr11	-	973	6	ISM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	431	315	431	-315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCTGTACAATTTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	17161137	17153512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987
ENSMUSG00000020116.8_17153661_17161568_1	chr11	-	1081	7	FSM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	0	463	0	-463	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTACAGCTAAACTTATA	NA	NA	NA	NA	NA	NA	NA	NA	17161568	17153660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
ENSMUSG00000020116.8_17153675_17161568_1	chr11	-	1067	7	FSM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	0	477	0	-477	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTGGTTACAGATTTA	NA	NA	NA	NA	NA	NA	NA	NA	17161568	17153674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
ENSMUSG00000020122.17_16808982_16819264_1	chr11	+	484	5	ISM	ENSMUSG00000020122.17	ENST00000454757.6	3405	26	88	42592	88	-18659	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACTCATGCTGTACAAC	NA	NA	NA	NA	NA	NA	NA	NA	16808981	16819264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16809048_16810067_16810252_16817230_16817300_16818107_16818227_16819218
ENSMUSG00000020122.17_16808999_16831490_1	chr11	+	1467	13	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	105	30366	105	-6433	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGCATCCAGTGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	16808998	16831490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16809048_16810067_16810252_16812945_16813081_16817230_16817300_16818107_16818227_16819218_16819361_16820975_16821093_16821582_16821710_16821801_16821876_16822845_16822937_16824959_16825160_16828126_16828260_16831463
ENSMUSG00000020122.17_16810086_16820995_1	chr11	+	516	5	ISM	ENSMUSG00000020122.17	ENST00000454757.6	3405	26	1192	40861	1192	-16928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTCATGTGTCCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	16810085	16820995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16810252_16817230_16817300_16818107_16818227_16819218_16819361_16820975
ENSMUSG00000020122.17_16810134_16833544_1	chr11	+	1505	13	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	1240	28312	1240	-4379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTGGTCTGGAAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	16810133	16833544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16810252_16812945_16813081_16817230_16817300_16818107_16818227_16819218_16819361_16820975_16821093_16821582_16821710_16821801_16821876_16822845_16822937_16824959_16825160_16828126_16828260_16831463_16831555_16833455
ENSMUSG00000020122.17_16810168_16821036_1	chr11	+	475	5	ISM	ENSMUSG00000020122.17	ENST00000454757.6	3405	26	1274	40820	1274	-16887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGAAGAAGATGGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	16810167	16821036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16810252_16817230_16817300_16818107_16818227_16819218_16819361_16820975
ENSMUSG00000020122.17_16810232_16821092_1	chr11	+	467	5	ISM	ENSMUSG00000020122.17	ENST00000454757.6	3405	26	1338	40764	1338	-16831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCAGTAGGGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	16810231	16821092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16810252_16817230_16817300_16818107_16818227_16819218_16819361_16820975
ENSMUSG00000020122.17_16813000_16840003_1	chr11	+	1526	14	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	4106	21853	4106	2080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCACATTGTTCGAAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	16812999	16840003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16813081_16817230_16817300_16818107_16818227_16819218_16819361_16820975_16821093_16821582_16821710_16821801_16821876_16822845_16822937_16824959_16825160_16828126_16828260_16831463_16831555_16833455_16833614_16837140_16837174_16839912
ENSMUSG00000020122.17_16817273_16841225_1	chr11	+	1502	14	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	8379	20631	8379	3302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGGATATTAAAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	16817272	16841225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16817300_16818107_16818227_16819218_16819361_16820975_16821093_16821582_16821710_16821801_16821876_16822845_16822937_16824959_16825160_16828126_16828260_16831463_16831555_16833455_16833614_16837140_16837174_16839912_16840055_16841177
ENSMUSG00000020122.17_16818181_16843079_1	chr11	+	1549	14	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	9287	18777	9287	5156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAGCCAACAAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	16818180	16843079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16818227_16819218_16819361_16820975_16821093_16821582_16821710_16821801_16821876_16822845_16822937_16824959_16825160_16828126_16828260_16831463_16831555_16833455_16833614_16837140_16837174_16839912_16840055_16841177_16841301_16843007
ENSMUSG00000020122.17_16819313_16846943_1	chr11	+	1486	14	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	10419	14913	10419	9020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCATCTGTCTGACCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	16819312	16846943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16819361_16820975_16821093_16821582_16821710_16821801_16821876_16822845_16822937_16824959_16825160_16828126_16828260_16831463_16831555_16833455_16833614_16837140_16837174_16839912_16840055_16841177_16841301_16843007_16843107_16846893
ENSMUSG00000020122.17_16819336_16847041_1	chr11	+	1561	14	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	10442	14815	10442	9118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTACCTCCTCAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	16819335	16847041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16819361_16820975_16821093_16821582_16821710_16821801_16821876_16822845_16822937_16824959_16825160_16828126_16828260_16831463_16831555_16833455_16833614_16837140_16837174_16839912_16840055_16841177_16841301_16843007_16843107_16846893
ENSMUSG00000020122.17_16821643_16854403_1	chr11	+	1496	13	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	12749	7453	12749	-7453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGCCAAACTGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	16821642	16854403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16821710_16821801_16821876_16822845_16822937_16824959_16825160_16828126_16828260_16831463_16831555_16833455_16833614_16837140_16837174_16839912_16840055_16841177_16841301_16843007_16843107_16846893_16847080_16854304
ENSMUSG00000020122.17_16821801_16855426_1	chr11	+	1566	13	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	12907	6430	12907	-6430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAAACTCTGATGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	16821800	16855426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16821876_16822845_16822937_16824959_16825160_16828126_16828260_16831463_16831555_16833455_16833614_16837140_16837174_16839912_16840055_16841177_16841301_16843007_16843107_16846893_16847080_16854304_16854461_16855347
ENSMUSG00000020122.17_16822859_16856766_1	chr11	+	1506	13	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	13965	5090	13965	-5090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAAGCCTTATGATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	16822858	16856766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16822937_16824959_16825160_16828126_16828260_16831463_16831555_16833455_16833614_16837140_16837174_16839912_16840055_16841177_16841301_16843007_16843107_16846893_16847080_16854304_16854461_16855347_16855424_16856735
ENSMUSG00000020122.17_16824975_16858899_1	chr11	+	1552	13	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	16081	2957	16081	-2957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCCAAAGTTCCGAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	16824974	16858899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16825160_16828126_16828260_16831463_16831555_16833455_16833614_16837140_16837174_16839912_16840055_16841177_16841301_16843007_16843107_16846893_16847080_16854304_16854461_16855347_16855424_16856735_16856883_16858876
ENSMUSG00000020122.17_16825075_16858943_1	chr11	+	1496	13	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	16181	2913	16181	-2913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGACCCACAGCGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	16825074	16858943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16825160_16828126_16828260_16831463_16831555_16833455_16833614_16837140_16837174_16839912_16840055_16841177_16841301_16843007_16843107_16846893_16847080_16854304_16854461_16855347_16855424_16856735_16856883_16858876
ENSMUSG00000020122.17_16828150_16859816_1	chr11	+	1504	13	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	19256	2040	19256	-2040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGCTGATGAGTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	16828149	16859816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16828260_16831463_16831555_16833455_16833614_16837140_16837174_16839912_16840055_16841177_16841301_16843007_16843107_16846893_16847080_16854304_16854461_16855347_16855424_16856735_16856883_16858876_16858975_16859731
ENSMUSG00000020122.17_16831534_16860823_1	chr11	+	1489	14	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	22640	1033	22640	-1033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGGTACAGCTCCGACCC	NA	NA	NA	NA	NA	NA	NA	NA	16831533	16860823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16831555_16833455_16833614_16837140_16837174_16839912_16840055_16841177_16841301_16843007_16843107_16846893_16847080_16854304_16854461_16855347_16855424_16856735_16856883_16858876_16858975_16859731_16859900_16860207_16860260_16860793
ENSMUSG00000020122.17_16833560_16861547_1	chr11	+	1491	14	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	24666	309	24666	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCACAATCAGCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	16833559	16861547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16833614_16837140_16837174_16839912_16840055_16841177_16841301_16843007_16843107_16846893_16847080_16854304_16854461_16855347_16855424_16856735_16856883_16858876_16858975_16859731_16859900_16860207_16860260_16860793_16860897_16861493
ENSMUSG00000020122.17_16839913_16861629_1	chr11	+	1482	12	ISM	ENSMUSG00000020122.17	ENSMUST00000020329.13	10208	28	137702	6529	31019	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATCTCAACACTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	16839912	16861629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16840055_16841177_16841301_16843007_16843107_16846893_16847080_16854304_16854461_16855347_16855424_16856735_16856883_16858876_16858975_16859731_16859900_16860207_16860256_16860793_16860897_16861493
ENSMUSG00000020122.17_16839957_16861686_1	chr11	+	1495	12	ISM	ENSMUSG00000020122.17	ENSMUST00000020329.13	10208	28	137746	6472	31063	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTGGATCCAGAAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	16839956	16861686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16840055_16841177_16841301_16843007_16843107_16846893_16847080_16854304_16854461_16855347_16855424_16856735_16856883_16858876_16858975_16859731_16859900_16860207_16860256_16860793_16860897_16861493
ENSMUSG00000020122.17_16840014_16861732_1	chr11	+	1484	12	ISM	ENSMUSG00000020122.17	ENSMUST00000020329.13	10208	28	137803	6426	31120	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACCAGCAGGACTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	16840013	16861732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16840055_16841177_16841301_16843007_16843107_16846893_16847080_16854304_16854461_16855347_16855424_16856735_16856883_16858876_16858975_16859731_16859900_16860207_16860256_16860793_16860897_16861493
ENSMUSG00000020122.17_16841176_16861858_1	chr11	+	1571	11	ISM	ENSMUSG00000020122.17	ENSMUST00000020329.13	10208	28	138965	6300	32282	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGGCATCATACCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	16841175	16861858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16841301_16843007_16843107_16846893_16847080_16854304_16854461_16855347_16855424_16856735_16856883_16858876_16858975_16859731_16859900_16860207_16860256_16860793_16860897_16861493
ENSMUSG00000020124.11_122947641_122982843_1	chr10	-	3945	15	ISM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	50015	0	50015	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGTCTTTTATTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	122982843	122947640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698
ENSMUSG00000020124.11_122947810_123004145_1	chr10	-	3852	17	ISM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	28713	169	28713	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTTTTCTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	123004145	122947809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131
ENSMUSG00000020124.11_122947860_123004197_1	chr10	-	3854	17	ISM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	28661	219	28661	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCTGCTTTAGGTATC	NA	NA	NA	NA	NA	NA	NA	NA	123004197	122947859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131
ENSMUSG00000020124.11_122947963_123007033_1	chr10	-	3860	18	ISM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	25825	322	25825	-322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAGGGAAAAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	123007033	122947962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004
ENSMUSG00000020124.11_122948007_123007096_1	chr10	-	3879	18	ISM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	25762	366	25762	-366	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGCACATTTTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	123007096	122948006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004
ENSMUSG00000020124.11_122948343_123032831_1	chr10	-	3937	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	27	702	27	-702	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGAACCTTGCAGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	123032831	122948342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ENSMUSG00000020124.11_122948396_123032831_1	chr10	-	3884	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	27	755	27	-755	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTCTCGGAAGGTAACC	NA	NA	NA	NA	NA	NA	NA	NA	123032831	122948395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ENSMUSG00000020128.16_21225035_21250038_1	chr11	+	822	6	ISM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	6252	20342	6252	-20342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATTGGAAGAGATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	21225034	21250038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21225130_21227674_21228061_21241032_21241160_21245340_21245397_21248753_21248851_21249977
ENSMUSG00000020128.16_21227903_21255717_1	chr11	+	846	6	ISM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	9120	14663	9120	-14663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTAATGCTTCAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	21227902	21255717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21228061_21241032_21241160_21245340_21245397_21248753_21248851_21249977_21250319_21255650
ENSMUSG00000020128.16_21241073_21256419_1	chr11	+	765	6	ISM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	22290	13961	22290	-13961	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGACATTCATAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	21241072	21256419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21241160_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365
ENSMUSG00000020128.16_21248804_21256952_1	chr11	+	744	5	ISM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	30021	13428	30021	-13428	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATTTCAGGATCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	21248803	21256952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908
ENSMUSG00000020128.16_21250049_21261102_1	chr11	+	785	6	ISM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	31266	9278	31266	-9278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAATATTGCCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	21250048	21261102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076
ENSMUSG00000020128.16_21250115_21261138_1	chr11	+	755	6	ISM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	31332	9242	31332	-9242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCACTACTGACATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	21250114	21261138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076
ENSMUSG00000020128.16_21250264_21262327_1	chr11	+	738	7	ISM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	31481	8053	31481	-8053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAATTCTTCCATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	21250263	21262327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239
ENSMUSG00000020128.16_21255708_21263099_1	chr11	+	764	8	ISM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	36925	7281	36925	-7281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTGAAATTTCAGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	21255707	21263099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083
ENSMUSG00000020128.16_21256380_21264993_1	chr11	+	817	8	ISM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	37597	5387	37597	-5387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGATCTTCTTCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	21256379	21264993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918
ENSMUSG00000020128.16_21256431_21264997_1	chr11	+	770	8	ISM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	37648	5383	37648	-5383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATCTTCTTCCCGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	21256430	21264997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918
ENSMUSG00000020128.16_21256525_21265026_1	chr11	+	705	8	ISM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	37742	5354	37742	-5354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGGTAACTCTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	21256524	21265026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918
ENSMUSG00000020128.16_21256970_21269780_1	chr11	+	744	9	ISM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	38187	600	38187	-600	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGAAATCTTCAAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	21256969	21269780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ENSMUSG00000020128.16_21261098_21269933_1	chr11	+	760	7	ISM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	42315	447	42315	-447	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAACTGAACCTGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	21261097	21269933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ENSMUSG00000020128.16_21262238_21270044_1	chr11	+	788	6	ISM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	43455	336	43455	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTAAGGAGCAAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	21262237	21270044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ENSMUSG00000020128.16_21263109_21270324_1	chr11	+	831	4	ISM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	44326	56	44326	-56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTATTTTTTTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	21263108	21270324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21263165_21264918_21265027_21266791_21266887_21269752
ENSMUSG00000020130.10_115039064_115046183_1	chr10	-	357	4	ISM	ENSMUSG00000020130.10	ENST00000550746.5	3259	18	41198	4734	41189	-4734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAATGGCAAAGCACTAT	NA	NA	NA	NA	NA	NA	NA	NA	115046183	115039063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_115039140_115044801_115044900_115045461_115045562_115046100
ENSMUSG00000020130.10_115048636_115055127_1	chr10	-	347	4	ISM	ENSMUSG00000020130.10	ENST00000550746.5	3259	18	32254	14306	32245	-14306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTTGATGACCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	115055127	115048635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_115048713_115053466_115053562_115054455_115054560_115055056
ENSMUSG00000020130.10_115056194_115065146_1	chr10	-	340	3	ISM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	22226	22417	22226	-21864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTTTCTTAGTGACGC	NA	NA	NA	NA	NA	NA	NA	NA	115065146	115056193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_115056314_115057487_115057591_115065029
ENSMUSG00000020130.10_115057533_115069129_1	chr10	-	374	3	ISM	ENSMUSG00000020130.10	ENST00000550746.5	3259	18	18252	23203	18243	-23203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGAAAATCTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	115069129	115057532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_115057591_115065029_115065241_115069024
ENSMUSG00000020131.15_80157117_80160886_1	chr10	-	1553	8	ISM	ENSMUSG00000020131.15	ENSMUST00000020340.15	2539	15	4446	0	4446	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCGAGTTTATGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	80160886	80157116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80157786_80157914_80158044_80158557_80158683_80158823_80159010_80159316_80159435_80159506_80159611_80159687_80159789_80160765
ENSMUSG00000020131.15_80157353_80161230_1	chr10	-	1573	9	ISM	ENSMUSG00000020131.15	ENSMUST00000020340.15	2539	15	4102	236	4102	-236	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGAGAAGCCTGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	80161230	80157352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80157786_80157914_80158044_80158557_80158683_80158823_80159010_80159316_80159435_80159506_80159611_80159687_80159789_80160765_80160979_80161066
ENSMUSG00000020131.15_80157641_80161859_1	chr10	-	1536	12	ISM	ENSMUSG00000020131.15	ENSMUST00000020340.15	2539	15	3473	524	3473	-524	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCGACTACACTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80161859	80157640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80157786_80157914_80158044_80158557_80158683_80158823_80159010_80159316_80159435_80159506_80159611_80159687_80159789_80160765_80160979_80161066_80161240_80161416_80161506_80161606_80161684_80161783
ENSMUSG00000020133.9_80155177_80156129_1	chr10	-	318	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	242	1089	242	-1089	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACACCTGATGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	80156129	80155176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80155382_80156016
ENSMUSG00000020133.9_80155251_80156188_1	chr10	-	303	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	183	1163	183	-1163	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCTTCGGCAAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	80156188	80155250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80155382_80156016
ENSMUSG00000020133.9_80155318_80156271_1	chr10	-	319	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	100	1230	100	-1230	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGGCCTACGTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	80156271	80155317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80155382_80156016
ENSMUSG00000020134.14_21097004_21098371_1	chr11	+	713	3	ISM	ENSMUSG00000020134.14	ENSMUST00000101477.2	3703	6	11535	1952	11535	-1952	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTGTGTTCAGAAAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	21097003	21098371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21097113_21097257_21097447_21097956
ENSMUSG00000020135.14_80137993_80142027_1	chr10	+	710	7	ISM	ENSMUSG00000020135.14	ENSMUST00000020349.7	9074	14	339	12063	336	-9902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACACTGCTGGCCATGTC	NA	NA	NA	NA	NA	NA	NA	NA	80137992	80142027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80138062_80138147_80138329_80140529_80140639_80140740_80140855_80141018_80141097_80141362_80141462_80141967
ENSMUSG00000020135.14_80138158_80142150_1	chr10	+	754	6	ISM	ENSMUSG00000020135.14	ENSMUST00000020349.7	9074	14	504	11940	501	-9779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCGGAGCGCCTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	80138157	80142150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80138329_80140529_80140639_80140740_80140855_80141018_80141097_80141362_80141462_80141967
ENSMUSG00000020135.14_80138254_80142289_1	chr10	+	797	6	ISM	ENSMUSG00000020135.14	ENSMUST00000020349.7	9074	14	600	11801	597	-9640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCGAGACCTGCTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	80138253	80142289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80138329_80140529_80140639_80140740_80140855_80141018_80141097_80141362_80141462_80141967
ENSMUSG00000020135.14_80140768_80143037_1	chr10	+	727	5	ISM	ENSMUSG00000020135.14	ENST00000233607.6	6928	14	3111	8892	3111	-8892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGGGCTATGAATGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	80140767	80143037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80140855_80141018_80141097_80141362_80141462_80141967_80142356_80142962
ENSMUSG00000020135.14_80141044_80143359_1	chr10	+	725	5	ISM	ENSMUSG00000020135.14	ENST00000233607.6	6928	14	3387	8570	3387	-8570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGCTGGCATGACCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	80141043	80143359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80141097_80141362_80141462_80141967_80142356_80142962_80143059_80143270
ENSMUSG00000020135.14_80141417_80143801_1	chr10	+	705	5	ISM	ENSMUSG00000020135.14	ENST00000233607.6	6928	14	3760	8128	3760	-8128	internal_fragment	TRUE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGCCCAGCTTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	80141416	80143801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80141462_80141967_80142356_80142962_80143059_80143270_80143411_80143765
ENSMUSG00000020135.14_80142081_80144853_1	chr10	+	765	6	ISM	ENSMUSG00000020135.14	ENST00000233607.6	6928	14	4424	7076	4424	-7076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAAGGCAGCCATCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	80142080	80144853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80142356_80142962_80143059_80143270_80143411_80143765_80143844_80144047_80144165_80144794
ENSMUSG00000020135.14_80142166_80144899_1	chr10	+	726	6	ISM	ENSMUSG00000020135.14	ENST00000233607.6	6928	14	4509	7030	4509	-7030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCACCCTCACATACCG	NA	NA	NA	NA	NA	NA	NA	NA	80142165	80144899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80142356_80142962_80143059_80143270_80143411_80143765_80143844_80144047_80144165_80144794
ENSMUSG00000020135.14_80142312_80146901_1	chr10	+	725	7	ISM	ENSMUSG00000020135.14	ENST00000233607.6	6928	14	4655	5028	4655	-5028	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCAGCACCTCACATCA	NA	NA	NA	NA	NA	NA	NA	NA	80142311	80146901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80142356_80142962_80143059_80143270_80143411_80143765_80143844_80144047_80144165_80144794_80145010_80146866
ENSMUSG00000020135.14_80143036_80147058_1	chr10	+	765	6	ISM	ENSMUSG00000020135.14	ENST00000233607.6	6928	14	5379	4871	5379	-4871	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCGCCATGGGTAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	80143035	80147058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80143059_80143270_80143411_80143765_80143844_80144047_80144165_80144794_80145010_80146866
ENSMUSG00000020135.14_80144079_80147285_1	chr10	+	720	3	ISM	ENSMUSG00000020135.14	ENST00000233607.6	6928	14	6422	4644	6422	-4644	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACCCCTCCGCCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	80144078	80147285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80144165_80144794_80145010_80146866
ENSMUSG00000020135.14_80144864_80147471_1	chr10	+	751	2	ISM	ENSMUSG00000020135.14	ENST00000233607.6	6928	14	7207	4458	7207	-4458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCCGCCAGGGTGGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	80144863	80147471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80145010_80146866
ENSMUSG00000020135.14_80144934_80147526_1	chr10	+	736	2	ISM	ENSMUSG00000020135.14	ENST00000233607.6	6928	14	7277	4403	7277	-4403	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGCCAAGGCCAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	80144933	80147526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80145010_80146866
ENSMUSG00000020137.6_115205074_115212340_1	chr10	-	3862	2	ISM	ENSMUSG00000020137.6	ENSMUST00000218842.2	4970	3	8000	765	7865	303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATCAAACGGATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	115212340	115205073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_115208852_115212256
ENSMUSG00000020142.13_20254116_20263994_1	chr11	-	793	4	NNC	ENSMUSG00000020142.13	novel	989	6	NA	NA	6241	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCCTCCTGAGCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	20263994	20254115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_20254501_20256465_20256601_20257891_20258087_20263916
ENSMUSG00000020142.13_20254210_20264084_1	chr11	-	789	4	NNC	ENSMUSG00000020142.13	novel	989	6	NA	NA	6151	-94	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGATGTGGGCATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	20264084	20254209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_20254501_20256465_20256601_20257891_20258087_20263916
ENSMUSG00000020142.13_20254210_20268723_1	chr11	-	847	5	NNC	ENSMUSG00000020142.13	novel	989	6	NA	NA	1512	-94	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGATGTGGGCATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	20268723	20254209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_20254501_20256465_20256601_20257891_20258082_20263915_20264083_20268659
ENSMUSG00000020142.13_20254250_20270213_1	chr11	-	833	6	FSM	ENSMUSG00000020142.13	ENST00000531327.5	989	6	22	134	22	-134	multi-exon	FALSE	canonical	NA	NA	NA	NA	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTGCCAGTACCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	20270213	20254249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_20254501_20256465_20256601_20257891_20258087_20263915_20264083_20268659_20268723_20270191
ENSMUSG00000020149.18_20151439_20174798_1	chr11	+	762	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	7	2058	0	-666	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCAGAGCACTCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	20151438	20174798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ENSMUSG00000020149.18_20151439_20174859_1	chr11	+	823	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	7	1997	0	-605	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTCACAGCAATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	20151438	20174859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ENSMUSG00000020149.18_20151439_20175464_1	chr11	+	1329	5	NNC	ENSMUSG00000020149.18	novel	1335	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	20151438	20175464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_20151653_20165629_20165703_20173083_20173180_20174369_20174499_20174647
ENSMUSG00000020149.18_20151439_20175464_2	chr11	+	1322	5	NNC	ENSMUSG00000020149.18	novel	1335	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	20151438	20175464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_20151653_20165629_20165703_20173093_20173180_20174366_20174499_20174647
ENSMUSG00000020149.18_20151439_20175464_3	chr11	+	1332	5	FSM	ENSMUSG00000020149.18	ENST00000409751.1	1335	5	3	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	20151438	20175464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_20151653_20165629_20165703_20173083_20173180_20174366_20174499_20174647
ENSMUSG00000020149.18_20151602_20174907_1	chr11	+	708	6	FSM	ENSMUSG00000020149.18	ENSMUST00000163483.2	2657	6	0	1949	0	-557	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCCTGAATTGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	20151601	20174907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ENSMUSG00000020149.18_20168816_20175106_1	chr11	+	780	4	ISM	ENSMUSG00000020149.18	ENSMUST00000163483.2	2657	6	17214	1750	17214	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACCAGATCGTTTCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	20168815	20175106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_20168909_20173083_20173180_20174366_20174499_20174647
ENSMUSG00000020149.18_20168876_20175158_1	chr11	+	772	4	ISM	ENSMUSG00000020149.18	ENSMUST00000163483.2	2657	6	17274	1698	17274	-306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGGCATGTTTAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	20168875	20175158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_20168909_20173083_20173180_20174366_20174499_20174647
ENSMUSG00000020150.14_80093985_80096752_1	chr10	-	894	6	FSM	ENSMUSG00000020150.14	ENSMUST00000105363.8	988	6	94	0	50	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGTTGGCAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	80096752	80093984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80094292_80094773_80094885_80095010_80095079_80095434_80095499_80095601_80095748_80096554
ENSMUSG00000020150.14_80093998_80096647_1	chr10	-	824	6	FSM	ENSMUSG00000020150.14	ENSMUST00000020359.7	979	6	155	0	155	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGAAGACTAGTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	80096647	80093997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80094292_80094773_80094933_80095010_80095079_80095434_80095499_80095601_80095748_80096554
ENSMUSG00000020152.8_20013222_20027230_1	chr11	-	1814	3	ISM	ENSMUSG00000020152.8	ENST00000377982.8	1952	10	35642	-735	35642	735	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATTAGTTTATATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	20027230	20013221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_20014860_20022455_20022589_20027187
ENSMUSG00000020152.8_20013335_20030073_1	chr11	-	1855	4	ISM	ENSMUSG00000020152.8	ENST00000377982.8	1952	10	32799	-622	32799	622	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTACTAATGATGAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	20030073	20013334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022
ENSMUSG00000020152.8_20013484_20030693_1	chr11	-	1837	5	ISM	ENSMUSG00000020152.8	ENST00000377982.8	1952	10	32179	-473	32179	473	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGGTATTGTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	20030693	20013483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661
ENSMUSG00000020152.8_20013539_20030745_1	chr11	-	1834	5	ISM	ENSMUSG00000020152.8	ENST00000377982.8	1952	10	32127	-418	32127	418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTACTTCCCAGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	20030745	20013538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661
ENSMUSG00000020152.8_20013712_20044277_1	chr11	-	1835	7	ISM	ENSMUSG00000020152.8	ENST00000377982.8	1952	10	18595	-245	18595	245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGAAGTAATTCATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	20044277	20013711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229
ENSMUSG00000020152.8_20013761_20044331_1	chr11	-	1840	7	ISM	ENSMUSG00000020152.8	ENST00000377982.8	1952	10	18541	-196	18541	196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTACTTTTATGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	20044331	20013760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229
ENSMUSG00000020152.8_20013841_20044402_1	chr11	-	1831	7	ISM	ENSMUSG00000020152.8	ENST00000377982.8	1952	10	18470	-116	18470	116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGGCCAGCATTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	20044402	20013840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229
ENSMUSG00000020152.8_20014054_20062867_1	chr11	-	1835	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	46	1750	5	-97	multi-exon	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGATGCATGAACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	20062867	20014053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ENSMUSG00000020153.15_80085144_80088991_1	chr10	+	303	3	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	-142	3635	-142	-3635	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCCATGCTCTGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	80085143	80088991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80085326_80088230_80088268_80088907
ENSMUSG00000020153.15_80085286_80089617_1	chr10	+	285	4	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	0	3009	0	-3009	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCTCGTGTCAAACC	NA	NA	NA	NA	NA	NA	NA	NA	80085285	80089617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493
ENSMUSG00000020153.15_80085294_80090691_1	chr10	+	295	5	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	8	1935	8	-1935	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCGGCCTGGCGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	80085293	80090691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673
ENSMUSG00000020153.15_80088230_80090700_1	chr10	+	273	4	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	2944	1926	2944	-1926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCGTGCTGTGCCGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80088229	80090700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80088268_80088907_80088992_80089493_80089618_80090673
ENSMUSG00000020153.15_80088928_80090773_1	chr10	+	288	3	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	3642	1853	3642	-1853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTGCCAGTCCGCGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	80088927	80090773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80088992_80089493_80089618_80090673
ENSMUSG00000020153.15_80089585_80091775_1	chr10	+	278	4	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	4299	851	4299	-851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTACCACTACTCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	80089584	80091775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80089618_80090673_80090854_80090923_80090971_80091757
ENSMUSG00000020153.15_80090733_80092481_1	chr10	+	269	4	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	5447	145	5447	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCCGAAGCACTCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	80090732	80092481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80090854_80090923_80090971_80091757_80091847_80092469
ENSMUSG00000020153.15_80090826_80092626_1	chr10	+	321	4	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	5540	0	5540	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTGTTCTGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80090825	80092626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80090854_80090923_80090971_80091757_80091847_80092469
ENSMUSG00000020154.11_116138189_116163940_1	chr10	+	1516	7	ISM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	179	52917	179	-52917	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGTTCTACCAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	116138188	116163940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116138287_116149718_116149998_116150946_116151205_116153270_116153535_116155237_116155508_116158329_116158591_116163854
ENSMUSG00000020154.11_116138237_116164004_1	chr10	+	1532	7	ISM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	227	52853	227	-52853	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATACCAGCAGATACAGC	NA	NA	NA	NA	NA	NA	NA	NA	116138236	116164004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116138287_116149718_116149998_116150946_116151205_116153270_116153535_116155237_116155508_116158329_116158591_116163854
ENSMUSG00000020154.11_116149935_116167243_1	chr10	+	1513	7	ISM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	11925	49614	11925	-49614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTCCTCATCATCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	116149934	116167243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116149998_116150946_116151205_116153270_116153535_116155237_116155508_116158329_116158591_116163854_116164122_116167113
ENSMUSG00000020154.11_116151089_116174610_1	chr10	+	1532	7	ISM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	13079	42247	13079	-42247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACTATGAAGTCACCATC	NA	NA	NA	NA	NA	NA	NA	NA	116151088	116174610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116151205_116153270_116153535_116155237_116155508_116158329_116158591_116163854_116164122_116167113_116167378_116174520
ENSMUSG00000020154.11_116151148_116174664_1	chr10	+	1527	7	ISM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	13138	42193	13138	-42193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCCAAGTCAGAAAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	116151147	116174664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116151205_116153270_116153535_116155237_116155508_116158329_116158591_116163854_116164122_116167113_116167378_116174520
ENSMUSG00000020154.11_116153420_116175420_1	chr10	+	1539	7	ISM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	15410	41437	15410	-41437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGCTGCTCTTCAACGA	NA	NA	NA	NA	NA	NA	NA	NA	116153419	116175420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116153535_116155237_116155508_116158329_116158591_116163854_116164122_116167113_116167378_116174520_116174785_116175322
ENSMUSG00000020154.11_116155434_116176923_1	chr10	+	1522	7	ISM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	17424	39934	17424	-39934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACTCTCAGACCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	116155433	116176923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116155508_116158329_116158591_116163854_116164122_116167113_116167378_116174520_116174785_116175322_116175587_116176795
ENSMUSG00000020154.11_116158459_116179759_1	chr10	+	1517	7	ISM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	20449	37098	20449	-37098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCGCCTCGGAGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	116158458	116179759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116158591_116163854_116164122_116167113_116167378_116174520_116174785_116175322_116175587_116176795_116177060_116179697
ENSMUSG00000020154.11_116163880_116179928_1	chr10	+	1529	6	ISM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	25870	36929	25870	-36929	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCAATGAGTCATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	116163879	116179928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116164122_116167113_116167378_116174520_116174785_116175322_116175587_116176795_116177060_116179697
ENSMUSG00000020154.11_116167237_116183890_1	chr10	+	1520	7	ISM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	29227	32967	29227	-32967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGAAGGGACCCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	116167236	116183890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116167378_116174520_116174785_116175322_116175587_116176795_116177060_116179697_116179962_116182703_116182968_116183831
ENSMUSG00000020154.11_116167299_116183958_1	chr10	+	1526	7	ISM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	29289	32899	29289	-32899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTACCATCTTCAACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	116167298	116183958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116167378_116174520_116174785_116175322_116175587_116176795_116177060_116179697_116179962_116182703_116182968_116183831
ENSMUSG00000020154.11_116174675_116185937_1	chr10	+	1515	7	ISM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	36665	30920	36665	-30920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTGACTCCGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	116174674	116185937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116174785_116175322_116175587_116176795_116177060_116179697_116179962_116182703_116182968_116183831_116184114_116185870
ENSMUSG00000020154.11_116174718_116186015_1	chr10	+	1550	7	ISM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	36708	30842	36708	-30842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTGGAGAAAGAAAAATCAC	NA	NA	NA	NA	NA	NA	NA	NA	116174717	116186015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116174785_116175322_116175587_116176795_116177060_116179697_116179962_116182703_116182968_116183831_116184114_116185870
ENSMUSG00000020154.11_116175498_116186746_1	chr10	+	1518	7	ISM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	37488	30111	37488	-30111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAACTGCAGCTGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	116175497	116186746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116175587_116176795_116177060_116179697_116179962_116182703_116182968_116183831_116184114_116185870_116186150_116186670
ENSMUSG00000020154.11_116176883_116189806_1	chr10	+	1527	7	ISM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	38873	27051	38873	-27051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAGTCCCGACAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	116176882	116189806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116177060_116179697_116179962_116182703_116182968_116183831_116184114_116185870_116186150_116186670_116186821_116189695
ENSMUSG00000020154.11_116176925_116189888_1	chr10	+	1567	7	ISM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	38915	26969	38915	-26969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCAGCAGAAATTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	116176924	116189888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116177060_116179697_116179962_116182703_116182968_116183831_116184114_116185870_116186150_116186670_116186821_116189695
ENSMUSG00000020154.11_116179828_116197178_1	chr10	+	1526	8	ISM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	41818	19679	41818	-19679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGCCTTCTTCATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	116179827	116197178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116179962_116182703_116182968_116183831_116184114_116185870_116186150_116186670_116186821_116189695_116189940_116193096_116193204_116197112
ENSMUSG00000020154.11_116182832_116199226_1	chr10	+	1507	10	NIC	ENSMUSG00000020154.11	novel	11911	32	NA	NA	44822	-17631	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTGAGAATCGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	116182831	116199226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_116182968_116183831_116184114_116185870_116186150_116186670_116186821_116189695_116189940_116193096_116193204_116197112_116197213_116198248_116198333_116198548_116198631_116199183
ENSMUSG00000020154.11_116183895_116203466_1	chr10	+	1514	11	NIC	ENSMUSG00000020154.11	novel	11911	32	NA	NA	45885	-13391	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAGAACGTTCACAACAT	NA	NA	NA	NA	NA	NA	NA	NA	116183894	116203466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_116184114_116185870_116186150_116186670_116186821_116189695_116189940_116193096_116193204_116197112_116197213_116198248_116198333_116198548_116198631_116199183_116199275_116199879_116199957_116203385
ENSMUSG00000020154.11_116184041_116204696_1	chr10	+	1521	12	NIC	ENSMUSG00000020154.11	novel	11911	32	NA	NA	46031	-12161	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGGAGTTTAAGATATG	NA	NA	NA	NA	NA	NA	NA	NA	116184040	116204696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_116184114_116185870_116186150_116186670_116186821_116189695_116189940_116193096_116193204_116197112_116197213_116198248_116198333_116198548_116198631_116199183_116199275_116199879_116199957_116203385_116203521_116204597
ENSMUSG00000020154.11_116186726_116216809_1	chr10	+	1511	13	NIC	ENSMUSG00000020154.11	novel	11911	32	NA	NA	48716	-48	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCTGTTTCCGATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	116186725	116216809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_116186821_116189695_116189940_116193096_116193204_116197112_116197213_116198248_116198333_116198548_116198631_116199183_116199275_116199879_116199957_116203385_116203521_116204597_116204721_116205200_116205365_116208745_116208882_116216736
ENSMUSG00000020156.17_80062268_80068685_1	chr10	+	1160	5	NNC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	0	-9010	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAACATCAGGCCACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	80062267	80068685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80062539_80064154_80064273_80064828_80064915_80065890_80065962_80068071
ENSMUSG00000020156.17_80062489_80068754_1	chr10	+	1008	5	NNC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	-35	-8941	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCCAGAACCCACCTAC	NA	NA	NA	NA	NA	NA	NA	NA	80062488	80068754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80062539_80064154_80064273_80064828_80064915_80065890_80065962_80068071
ENSMUSG00000020156.17_80062489_80068802_1	chr10	+	1056	5	NNC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	-35	-8893	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCGCCCTGCCCTAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	80062488	80068802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80062539_80064154_80064273_80064828_80064915_80065890_80065962_80068071
ENSMUSG00000020156.17_80062585_80077695_1	chr10	+	951	8	NNC	ENSMUSG00000020156.17	novel	1017	8	NA	NA	61	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGGCCCCACACTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	80062584	80077695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80062641_80064155_80064230_80071944_80072016_80074148_80074275_80075758_80075830_80076225_80076277_80076597_80077035_80077630
ENSMUSG00000020156.17_80062585_80077695_2	chr10	+	954	8	NNC	ENSMUSG00000020156.17	novel	1017	8	NA	NA	61	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGGCCCCACACTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	80062584	80077695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80062641_80064155_80064230_80071944_80072020_80074154_80074275_80075753_80075830_80076225_80076277_80076597_80077035_80077630
ENSMUSG00000020156.17_80062585_80077695_3	chr10	+	956	8	FSM	ENSMUSG00000020156.17	ENST00000591337.7	1017	8	61	0	61	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGGCCCCACACTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	80062584	80077695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80062641_80064155_80064230_80071944_80072016_80074148_80074275_80075753_80075830_80076225_80076277_80076597_80077035_80077630
ENSMUSG00000020156.17_80064830_80072015_1	chr10	+	1142	5	ISM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	2562	7722	2306	-5680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACACCTGCCGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	80064829	80072015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944
ENSMUSG00000020156.17_80065916_80074208_1	chr10	+	1092	5	ISM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	3648	5529	3392	-3487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCAAGGGCCGAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	80065915	80074208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148
ENSMUSG00000020156.17_80068204_80076263_1	chr10	+	1106	7	ISM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	5936	3474	5680	-1432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTGATATCAGTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	80068203	80076263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225
ENSMUSG00000020156.17_80068321_80076723_1	chr10	+	1128	8	ISM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	6053	3014	5797	-972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGACCGCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	80068320	80076723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597
ENSMUSG00000020156.17_80068400_80076759_1	chr10	+	1085	8	ISM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	6132	2978	5876	-936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCAGAAGCTGGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	80068399	80076759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597
ENSMUSG00000020156.17_80068663_80077648_1	chr10	+	1115	9	ISM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	6395	2089	6139	-47	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCGGTGGAGGCGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80068662	80077648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630
ENSMUSG00000020156.17_80068804_80079463_1	chr10	+	1089	10	ISM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	6536	274	6280	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCCGTCGCTGATGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	80068803	80079463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ENSMUSG00000020156.17_80068865_80079529_1	chr10	+	1094	10	ISM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	6597	208	6341	-208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCAGGCCTAGGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80068864	80079529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ENSMUSG00000020156.17_80071945_80079737_1	chr10	+	1180	8	ISM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	9677	0	9421	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATAGTCATTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	80071944	80079737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ENSMUSG00000020159.9_33502538_33522407_1	chr11	-	997	7	NNC	ENSMUSG00000020159.9	novel	1085	7	NA	NA	86	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCATTGAACTCTTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	33522407	33502537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_33502843_33504967_33505121_33506929_33507068_33513868_33513949_33517212_33517431_33518066_33518135_33522372
ENSMUSG00000020159.9_33502538_33522407_3	chr11	-	1000	7	FSM	ENSMUSG00000020159.9	ENST00000519385.5	1085	7	86	-1	86	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCATTGAACTCTTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	33522407	33502537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_33502843_33504967_33505121_33506929_33507068_33513865_33513949_33517212_33517431_33518066_33518135_33522372
ENSMUSG00000020159.9_33502538_33522407_4	chr11	-	992	7	NNC	ENSMUSG00000020159.9	novel	1085	7	NA	NA	86	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCATTGAACTCTTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	33522407	33502537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_33502843_33504967_33505121_33506929_33507068_33513865_33513949_33517212_33517431_33518074_33518135_33522372
ENSMUSG00000020159.9_33502538_33522463_1	chr11	-	1055	7	NNC	ENSMUSG00000020159.9	novel	1085	7	NA	NA	30	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCATTGAACTCTTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	33522463	33502537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_33502843_33504967_33505121_33506930_33507068_33513865_33513949_33517212_33517431_33518066_33518135_33522372
ENSMUSG00000020160.19_18829177_18830727_1	chr11	-	1405	2	ISM	ENSMUSG00000020160.19	ENST00000272369.14	4564	14	138239	21	134154	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAATAAACTTTATAAAC	NA	NA	NA	NA	NA	NA	NA	NA	18830727	18829176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_18829345_18829490
ENSMUSG00000020160.19_18829224_18830782_1	chr11	-	1413	2	ISM	ENSMUSG00000020160.19	ENST00000272369.14	4564	14	138184	68	134099	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGTGGTTAGTTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	18830782	18829223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_18829345_18829490
ENSMUSG00000020160.19_18830662_18834476_1	chr11	-	1446	3	ISM	ENSMUSG00000020160.19	ENST00000495021.6	2750	12	130405	195	130405	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTATTGCATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	18834476	18830661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_18831923_18833987_18834083_18834386
ENSMUSG00000020160.19_18830781_18835651_1	chr11	-	1386	4	ISM	ENSMUSG00000020160.19	ENST00000495021.6	2750	12	129230	314	129230	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGACTTTGTTTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	18835651	18830780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_18831923_18833987_18834083_18834386_18834477_18835592
ENSMUSG00000020160.19_18830995_18891725_1	chr11	-	1316	6	ISM	ENSMUSG00000020160.19	ENST00000495021.6	2750	12	73156	528	73156	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCAGTCACCAACAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	18891725	18830994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_18831923_18833987_18834083_18834386_18834477_18835592_18835652_18855688_18855766_18891658
ENSMUSG00000020160.19_18831218_18938368_1	chr11	-	1273	7	ISM	ENSMUSG00000020160.19	ENST00000495021.6	2750	12	26513	751	26513	-543	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGGCAGAAGAATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	18938368	18831217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_18831923_18833987_18834083_18834386_18834477_18835592_18835652_18855688_18855766_18891658_18891805_18938267
ENSMUSG00000020160.19_18831360_18963682_1	chr11	-	1391	10	ISM	ENSMUSG00000020160.19	ENST00000495021.6	2750	12	1199	893	1199	-685	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAATTTTTCCACACTA	NA	NA	NA	NA	NA	NA	NA	NA	18963682	18831359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_18831923_18833987_18834083_18834386_18834477_18835592_18835652_18855688_18855766_18891658_18891805_18938267_18938380_18961241_18961389_18962809_18962861_18963631
ENSMUSG00000020160.19_18831544_18964353_1	chr11	-	1311	11	ISM	ENSMUSG00000020160.19	ENST00000495021.6	2750	12	528	1077	528	-869	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAGGAGCATCCCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	18964353	18831543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_18831923_18833987_18834083_18834386_18834477_18835592_18835652_18855688_18855766_18891658_18891805_18938267_18938380_18961241_18961389_18962809_18962861_18963631_18963683_18964249
ENSMUSG00000020160.19_18831748_18964685_1	chr11	-	1273	12	FSM	ENSMUSG00000020160.19	ENST00000495021.6	2750	12	196	1281	196	-1073	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGACAGCCCCACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	18964685	18831747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_18831923_18833987_18834083_18834386_18834477_18835592_18835652_18855688_18855766_18891658_18891805_18938267_18938380_18961241_18961389_18962809_18962861_18963631_18963683_18964249_18964392_18964557
ENSMUSG00000020160.19_18831778_18968276_1	chr11	-	1398	13	FSM	ENSMUSG00000020160.19	ENSMUST00000068264.14	3196	13	682	1116	438	-1103	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCTCACCACCCCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	18968276	18831777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_18831923_18833987_18834083_18834386_18834477_18835592_18835652_18855688_18855766_18891658_18891805_18938267_18938380_18961241_18961389_18962809_18962861_18963631_18963683_18964249_18964392_18966132_18966360_18968220
ENSMUSG00000020160.19_18831813_18964755_1	chr11	-	1278	12	FSM	ENSMUSG00000020160.19	ENST00000495021.6	2750	12	126	1346	126	-1138	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATGGGCCCCCCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	18964755	18831812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_18831923_18833987_18834083_18834386_18834477_18835592_18835652_18855688_18855766_18891658_18891805_18938267_18938380_18961241_18961389_18962809_18962861_18963631_18963683_18964249_18964392_18964557
ENSMUSG00000020160.19_18831837_18968319_1	chr11	-	1382	13	FSM	ENSMUSG00000020160.19	ENSMUST00000068264.14	3196	13	639	1175	395	-1162	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCCCCCATCCTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	18968319	18831836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_18831923_18833987_18834083_18834386_18834477_18835592_18835652_18855688_18855766_18891658_18891805_18938267_18938380_18961241_18961389_18962809_18962861_18963631_18963683_18964249_18964392_18966132_18966360_18968220
ENSMUSG00000020160.19_18831887_18964786_1	chr11	-	1235	12	FSM	ENSMUSG00000020160.19	ENST00000495021.6	2750	12	95	1420	95	-1212	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCCCAATGGGTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	18964786	18831886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_18831923_18833987_18834083_18834386_18834477_18835592_18835652_18855688_18855766_18891658_18891805_18938267_18938380_18961241_18961389_18962809_18962861_18963631_18963683_18964249_18964392_18964557
ENSMUSG00000020160.19_18834031_18968487_1	chr11	-	1421	12	ISM	ENSMUSG00000020160.19	ENSMUST00000068264.14	3196	13	471	3369	227	-3356	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAACCTTCATCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	18968487	18834030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_18834083_18834386_18834477_18835592_18835652_18855688_18855766_18891658_18891805_18938267_18938380_18961241_18961389_18962809_18962861_18963631_18963683_18964249_18964392_18966132_18966360_18968220
ENSMUSG00000020160.19_18855699_18968714_1	chr11	-	1437	9	ISM	ENSMUSG00000020160.19	ENSMUST00000177417.8	5308	11	0	25024	0	-25024	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAATTGGTGAGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	18968714	18855698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_18855766_18891658_18891805_18938267_18938380_18961241_18961389_18962809_18962861_18963631_18963683_18964249_18964392_18966132_18966360_18968220
ENSMUSG00000020160.19_18938266_18968922_1	chr11	-	1434	7	ISM	ENSMUSG00000020160.19	ENSMUST00000068264.14	3196	13	36	107604	36	-107591	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGAGGTGTTCTCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	18968922	18938265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_18938380_18961241_18961389_18962809_18962861_18963631_18963683_18964249_18964392_18966132_18966360_18968220
ENSMUSG00000020166.16_116328196_116385080_1	chr10	-	1509	13	ISM	ENSMUSG00000020166.16	ENSMUST00000164088.8	2618	14	-12	7126	-12	-6094	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTTCCCATGTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	116385080	116328195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937
ENSMUSG00000020166.16_116342286_116385080_1	chr10	-	512	5	ISM	ENSMUSG00000020166.16	ENSMUST00000167706.8	1621	16	32327	20184	-12	3410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACCACTCCCAGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	116385080	116342285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937
ENSMUSG00000020167.15_80245460_80246309_1	chr10	-	519	3	ISM	ENSMUSG00000020167.15	ENST00000588136.7	2611	20	23165	17	20537	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTCTCATGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	80246309	80245459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80245758_80245965_80246109_80246231
ENSMUSG00000020167.15_80245460_80246365_1	chr10	-	575	3	ISM	ENSMUSG00000020167.15	ENST00000588136.7	2611	20	23109	17	20481	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTCTCATGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	80246365	80245459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80245758_80245965_80246109_80246231
ENSMUSG00000020167.15_80245460_80251321_1	chr10	-	1259	5	ISM	ENSMUSG00000020167.15	ENSMUST00000105341.8	2451	18	15525	6	15525	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTCTCATGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	80251321	80245459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198
ENSMUSG00000020167.15_80245595_80246435_1	chr10	-	510	3	ISM	ENSMUSG00000020167.15	ENST00000588136.7	2611	20	23039	152	20411	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAATAAAGGAACATTAG	NA	NA	NA	NA	NA	NA	NA	NA	80246435	80245594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80245758_80245965_80246109_80246231
ENSMUSG00000020167.15_80245697_80249102_1	chr10	-	495	4	ISM	ENSMUSG00000020167.15	ENST00000588136.7	2611	20	20372	254	17744	191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACGGAAGAGTCGGACCG	NA	NA	NA	NA	NA	NA	NA	NA	80249102	80245696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80245758_80245965_80246109_80246231_80246459_80249038
ENSMUSG00000020167.15_80245727_80252450_1	chr10	-	1156	7	ISM	ENSMUSG00000020167.15	ENSMUST00000105341.8	2451	18	14396	273	14396	161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGAAAGAAAGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	80252450	80245726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393
ENSMUSG00000020167.15_80245736_80249171_1	chr10	-	525	4	ISM	ENSMUSG00000020167.15	ENST00000588136.7	2611	20	20303	293	17675	152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCTTTTCAAAAAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	80249171	80245735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80245758_80245965_80246109_80246231_80246459_80249038
ENSMUSG00000020167.15_80245888_80253059_1	chr10	-	1215	9	ISM	ENSMUSG00000020167.15	ENSMUST00000020379.13	2829	19	16410	428	13787	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCCATCGAAGCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	80253059	80245887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923
ENSMUSG00000020167.15_80246232_80253474_1	chr10	-	1255	10	ISM	ENSMUSG00000020167.15	ENSMUST00000020379.13	2829	19	15995	772	13372	-344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGCTGCGCCCGCCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	80253474	80246231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371
ENSMUSG00000020167.15_80246348_80254649_1	chr10	-	1186	11	ISM	ENSMUSG00000020167.15	ENSMUST00000105340.8	2826	19	14820	888	12197	-460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGAGCTGGGCCGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	80254649	80246347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80246456_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599
ENSMUSG00000020167.15_80248743_80253206_1	chr10	-	1123	8	ISM	ENSMUSG00000020167.15	ENST00000395423.7	2140	15	16257	82	13640	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGCGAGAAGCCGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	80253206	80248742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146
ENSMUSG00000020167.15_80248800_80253260_1	chr10	-	1120	8	ISM	ENSMUSG00000020167.15	ENST00000395423.7	2140	15	16203	139	13586	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCGCGACATCAATGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	80253260	80248799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146
ENSMUSG00000020167.15_80248859_80253304_1	chr10	-	1105	8	ISM	ENSMUSG00000020167.15	ENST00000395423.7	2140	15	16159	198	13542	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGCGGAGCGGGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	80253304	80248858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146
ENSMUSG00000020167.15_80249113_80255929_1	chr10	-	1215	12	ISM	ENSMUSG00000020167.15	ENSMUST00000105342.8	2928	19	13548	3732	10917	-452	internal_fragment	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAGGAAATCGCATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	80255929	80249112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854
ENSMUSG00000020167.15_80251281_80253233_1	chr10	-	512	6	ISM	ENSMUSG00000020167.15	ENST00000395423.7	2140	15	16230	2620	13613	-2620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGGGCTTTTGCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	80253233	80251280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146
ENSMUSG00000020167.15_80252393_80253474_1	chr10	-	536	5	ISM	ENSMUSG00000020167.15	ENST00000395423.7	2140	15	15989	3732	13372	-3732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGGTGATGGGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	80253474	80252392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371
ENSMUSG00000020167.15_80252974_80269455_1	chr10	-	1261	11	ISM	ENSMUSG00000020167.15	ENSMUST00000020377.13	2842	19	0	7532	0	-4313	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGGCCACACGCCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80269455	80252973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ENSMUSG00000020167.15_80255392_80269207_1	chr10	-	490	7	ISM	ENSMUSG00000020167.15	ENST00000588136.7	2611	20	267	9949	248	-6731	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTCCCCATCGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	80269207	80255391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266871_80269153
ENSMUSG00000020167.15_80255917_80269355_1	chr10	-	534	6	ISM	ENSMUSG00000020167.15	ENST00000588136.7	2611	20	119	10474	100	-7256	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAGCGGAATGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	80269355	80255916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266871_80269153
ENSMUSG00000020169.5_116822473_116837794_1	chr10	+	1171	3	NNC	ENSMUSG00000020169.5	novel	1177	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTTGCTTTAGATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	116822472	116837794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_116822718_116828968_116829203_116837102
ENSMUSG00000020169.5_116822473_116837794_2	chr10	+	1177	3	FSM	ENSMUSG00000020169.5	ENST00000266661.8	1177	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTTGCTTTAGATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	116822472	116837794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_116822718_116828968_116829203_116837096
ENSMUSG00000020169.5_116832456_116844858_1	chr10	+	435	5	ISM	ENSMUSG00000020169.5	ENST00000488961.5	1887	6	144	16203	144	7064	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACGATTCTGCTGCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	116832455	116844858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116832513_116838424_116838580_116839789_116839868_116843492_116843574_116844794
ENSMUSG00000020169.5_116838514_116859899_1	chr10	+	435	5	ISM	ENSMUSG00000020169.5	ENST00000488961.5	1887	6	6202	1162	6202	-1046	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGGCACTCAGTGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	116838513	116859899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116838580_116839789_116839868_116843492_116843574_116844794_116844947_116859841
ENSMUSG00000020169.5_116844898_116860215_1	chr10	+	423	2	ISM	ENSMUSG00000020169.5	ENST00000488961.5	1887	6	12586	846	12586	-730	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAAAATGCCCCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	116844897	116860215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116844947_116859841
ENSMUSG00000020171.9_117051127_117058132_1	chr10	-	1012	6	ISM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	2280	0	2151	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGTCTGCCTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	117058132	117051126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078
ENSMUSG00000020171.9_117051333_117060272_1	chr10	-	981	7	FSM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	140	206	11	-206	multi-exon	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAACTCTATGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	117060272	117051332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060163
ENSMUSG00000020171.9_117051333_117060395_1	chr10	-	1104	7	FSM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	17	206	17	-206	multi-exon	FALSE	canonical	NA	NA	NA	NA	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAACTCTATGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	117060395	117051332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060163
ENSMUSG00000020171.9_117051433_117060395_1	chr10	-	1004	7	FSM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	17	306	17	143	multi-exon	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCAGGCTGCCTCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	117060395	117051432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060163
ENSMUSG00000020171.9_117051441_117060395_1	chr10	-	990	7	NNC	ENSMUSG00000020171.9	novel	1327	7	NA	NA	17	135	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCACACTGTCAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	117060395	117051440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_117051736_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060163
ENSMUSG00000020171.9_117053389_117058143_1	chr10	-	103	2	ISM	ENSMUSG00000020171.9	ENST00000548020.5	587	5	2140	1813	2140	-1813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAATGCCATGCTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	117058143	117053388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117053427_117058078
ENSMUSG00000020173.18_12319593_12414800_1	chr11	-	901	6	NNC	ENSMUSG00000020173.18	novel	929	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCACACACAAGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	12414800	12319592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_12319692_12323334_12323374_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ENSMUSG00000020173.18_12319593_12414800_2	chr11	-	904	6	NNC	ENSMUSG00000020173.18	novel	929	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCACACACAAGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	12414800	12319592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_12319692_12323328_12323374_12325809_12326039_12328148_12328360_12336562_12336764_12414681
ENSMUSG00000020173.18_12319593_12414800_3	chr11	-	900	6	NNC	ENSMUSG00000020173.18	novel	929	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCACACACAAGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	12414800	12319592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_12319692_12323328_12323374_12325809_12326039_12328148_12328360_12336569_12336767_12414681
ENSMUSG00000020173.18_12319593_12414800_4	chr11	-	907	6	FSM	ENSMUSG00000020173.18	ENST00000632460.1	929	6	22	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCACACACAAGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	12414800	12319592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_12319692_12323328_12323374_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ENSMUSG00000020180.11_75353385_75372220_1	chr10	+	2041	4	FSM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	0	995	0	968	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTGGTTGACACAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	75353384	75372220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_75353960_75355147_75355295_75368010_75368204_75371094
ENSMUSG00000020180.11_75353523_75372323_1	chr10	+	2006	4	FSM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	138	892	138	-892	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCGTGGGCCACTATACC	NA	NA	NA	NA	NA	NA	NA	NA	75353522	75372323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_75353960_75355147_75355295_75368010_75368204_75371094
ENSMUSG00000020180.11_75353723_75372477_1	chr10	+	1960	4	FSM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	338	738	-154	-738	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACCATAATCCCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	75353722	75372477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_75353960_75355147_75355295_75368010_75368204_75371094
ENSMUSG00000020180.11_75355147_75372684_1	chr10	+	1931	3	ISM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	1762	531	1270	-531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTTTTGGGAGTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	75355146	75372684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75355295_75368010_75368204_75371094
ENSMUSG00000020180.11_75355187_75372752_1	chr10	+	1959	3	ISM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	1802	463	1310	-463	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCCGCCCCCTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	75355186	75372752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75355295_75368010_75368204_75371094
ENSMUSG00000020180.11_75355241_75372808_1	chr10	+	1961	3	ISM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	1856	407	1364	-407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCTGTCCCAGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	75355240	75372808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75355295_75368010_75368204_75371094
ENSMUSG00000020180.11_75368115_75372997_1	chr10	+	1992	2	ISM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	14730	218	14238	-218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTTATCTTGGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	75368114	75372997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75368204_75371094
ENSMUSG00000020180.11_75368164_75373059_1	chr10	+	2005	2	ISM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	14779	156	14287	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATCTGTTCTTTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	75368163	75373059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75368204_75371094
ENSMUSG00000020181.19_109590848_109600701_1	chr10	-	678	4	ISM	ENSMUSG00000020181.19	ENST00000536525.6	7346	39	235505	70987	68381	-70987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTCCGGCTCATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	109600701	109590847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_109591000_109594749_109594911_109596347_109596390_109600378
ENSMUSG00000020181.19_109606116_109660508_1	chr10	-	649	4	ISM	ENSMUSG00000020181.19	ENSMUST00000238286.2	7316	29	8574	87110	8574	-86255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCACGTCCTCCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	109660508	109606115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_109606186_109652114_109652235_109659096_109659481_109660433
ENSMUSG00000020181.19_109652150_109677646_1	chr10	-	660	4	ISM	ENSMUSG00000020181.19	ENST00000536525.6	7346	39	158560	132289	-8564	-132289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCGTTCACGATGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	109677646	109652149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_109652235_109659096_109659481_109660433_109660538_109677559
ENSMUSG00000020181.19_109659152_109688440_1	chr10	-	628	4	ISM	ENSMUSG00000020181.19	ENST00000536525.6	7346	39	147766	139291	-19358	-139291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCGATGGTGATATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	109688440	109659151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_109659481_109660433_109660538_109677559_109677680_109688365
ENSMUSG00000020181.19_109659268_109688587_1	chr10	-	659	4	ISM	ENSMUSG00000020181.19	ENST00000536525.6	7346	39	147619	139407	-19505	-139407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCCTCTCCGCCGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	109688587	109659267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_109659481_109660433_109660538_109677559_109677680_109688365
ENSMUSG00000020181.19_109659420_109688715_1	chr10	-	635	4	ISM	ENSMUSG00000020181.19	ENST00000536525.6	7346	39	147491	139559	-19633	-139559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGACAAGCCGACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	109688715	109659419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_109659481_109660433_109660538_109677559_109677680_109688365
ENSMUSG00000020181.19_109677584_109688928_1	chr10	-	659	2	ISM	ENSMUSG00000020181.19	ENST00000536525.6	7346	39	147278	157723	-19846	-157723	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCCTAGAAGAGATATCTG	NA	NA	NA	NA	NA	NA	NA	NA	109688928	109677583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_109677680_109688365
ENSMUSG00000020181.19_109688810_109699693_1	chr10	-	667	2	ISM	ENSMUSG00000020181.19	ENST00000536525.6	7346	39	136513	168949	-30611	-168949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTGACGACGGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	109699693	109688809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_109689396_109699612
ENSMUSG00000020181.19_109689071_109716478_1	chr10	-	617	4	ISM	ENSMUSG00000020181.19	ENST00000536525.6	7346	39	119728	169210	-47396	-169210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGTTCTGGACCTAACG	NA	NA	NA	NA	NA	NA	NA	NA	109716478	109689070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_109689396_109699612_109699753_109702791_109702861_109716395
ENSMUSG00000020181.19_109689190_109719530_1	chr10	-	655	5	ISM	ENSMUSG00000020181.19	ENST00000536525.6	7346	39	116676	169329	-50448	-169329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACAGACTGAAGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	109719530	109689189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_109689396_109699612_109699753_109702791_109702861_109716395_109716580_109719474
ENSMUSG00000020181.19_109716494_109836080_1	chr10	-	573	5	ISM	ENSMUSG00000020181.19	ENST00000536525.6	7346	39	126	196633	0	-196633	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACCAGTCCTTGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	109836080	109716493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_109716580_109719474_109719548_109738922_109738976_109739606_109739725_109835837
ENSMUSG00000020181.19_109739644_109836554_1	chr10	-	641	3	ISM	ENSMUSG00000020181.19	ENST00000397909.7	10242	41	215	222207	215	-219783	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGGGTCCTTCTGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	109836554	109739643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_109739725_109835837_109836206_109836362
ENSMUSG00000020182.17_11764398_11815035_1	chr11	-	1156	10	FSM	ENSMUSG00000020182.17	ENST00000426377.5	1148	10	-6	-2	-6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGACTGACTTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	11815035	11764397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11779077_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893
ENSMUSG00000020182.17_11764490_11814907_1	chr11	-	792	9	ISM	ENSMUSG00000020182.17	ENST00000617822.4	1124	10	8347	90	122	-90	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACTGGAAAGAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	11814907	11764489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11779077_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11814893
ENSMUSG00000020182.17_11764490_11823198_1	chr11	-	843	9	FSM	ENSMUSG00000020182.17	ENST00000431062.5	989	9	56	90	56	-90	multi-exon	FALSE	canonical	NA	NA	NA	NA	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACTGGAAAGAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	11823198	11764489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11779077_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11823133
ENSMUSG00000020182.17_11765211_11815035_1	chr11	-	892	8	ISM	ENSMUSG00000020182.17	ENST00000617822.4	1124	10	8219	811	-6	-811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTAGCTGCACCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	11815035	11765210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_11765429_11769290_11769393_11772194_11772294_11779077_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11814893
ENSMUSG00000020182.17_11765347_11823203_1	chr11	-	819	9	ISM	ENSMUSG00000020182.17	ENST00000617822.4	1124	10	51	947	51	-947	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTTTGTGCTACGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	11823203	11765346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_11765429_11769290_11769393_11772194_11772294_11779077_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11814893_11815029_11823133
ENSMUSG00000020182.17_11779078_11814907_1	chr11	-	489	6	ISM	ENSMUSG00000020182.17	ENST00000426377.5	1148	10	122	14678	122	-14678	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCACTGTGATTAGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	11814907	11779077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893
ENSMUSG00000020182.17_11785741_11815035_1	chr11	-	517	5	ISM	ENSMUSG00000020182.17	ENST00000426377.5	1148	10	-6	21341	-6	-21341	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTTCTCTGTTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	11815035	11785740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893
ENSMUSG00000020182.17_11789398_11823198_1	chr11	-	506	5	ISM	ENSMUSG00000020182.17	ENST00000357936.9	1268	11	56	24998	56	-24998	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAAGCTGTTCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	11823198	11789397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133
ENSMUSG00000020183.12_117465636_117529747_1	chr10	+	1781	9	NNC	ENSMUSG00000020183.12	novel	1807	9	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1014	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTATACAGTGAGTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	117465635	117529747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_117465782_117495672_117495771_117503853_117504027_117506071_117506257_117507500_117507672_117511844_117511998_117515867_117516017_117519182_117519783_117529641
ENSMUSG00000020183.12_117465636_117529747_2	chr10	+	1781	9	NNC	ENSMUSG00000020183.12	novel	1807	9	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTATACAGTGAGTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	117465635	117529747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_117465789_117495672_117495771_117503853_117504027_117506071_117506257_117507500_117507672_117511844_117511998_117515867_117516017_117519189_117519783_117529641
ENSMUSG00000020183.12_117465636_117529747_3	chr10	+	1780	9	NNC	ENSMUSG00000020183.12	novel	1807	9	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	949	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTATACAGTGAGTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	117465635	117529747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_117465789_117495672_117495771_117503853_117504027_117506071_117506257_117507500_117507672_117511844_117511998_117515867_117516017_117519182_117519783_117529649
ENSMUSG00000020183.12_117465636_117529747_4	chr10	+	1781	9	NNC	ENSMUSG00000020183.12	novel	1807	9	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1068	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTATACAGTGAGTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	117465635	117529747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_117465789_117495672_117495771_117503860_117504027_117506071_117506257_117507500_117507672_117511844_117511998_117515867_117516017_117519182_117519783_117529641
ENSMUSG00000020183.12_117465636_117529747_6	chr10	+	1788	9	NIC	ENSMUSG00000020183.12	novel	1807	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1403	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTATACAGTGAGTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	117465635	117529747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_117465789_117495672_117495771_117503853_117504027_117506071_117506257_117507500_117507672_117511844_117511998_117515867_117516017_117519182_117519783_117529641
ENSMUSG00000020183.12_117465718_117529747_1	chr10	+	1698	9	NNC	ENSMUSG00000020183.12	novel	1807	9	NA	NA	91	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTATACAGTGAGTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	117465717	117529747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_117465789_117495672_117495771_117503853_117504027_117506071_117506257_117507500_117507672_117511844_117511998_117515875_117516017_117519182_117519783_117529641
ENSMUSG00000020184.16_117526014_117545684_1	chr10	-	831	3	NNC	ENSMUSG00000020184.16	novel	800	3	NA	NA	1	39	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTCCACATAAAATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	117545684	117526013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_117526691_117541059_117541130_117545600
ENSMUSG00000020184.16_117526014_117545684_2	chr10	-	832	3	FSM	ENSMUSG00000020184.16	ENST00000393412.7	800	3	7	-39	1	39	multi-exon	FALSE	canonical	NA	NA	NA	NA	2715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTCCACATAAAATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	117545684	117526013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_117526691_117541059_117541135_117545604
ENSMUSG00000020184.16_117526148_117528642_1	chr10	-	777	3	ISM	ENSMUSG00000020184.16	ENST00000299252.8	960	5	17043	27	17043	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATGATTGTGCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	117528642	117526147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117526691_117527049_117527128_117528486
ENSMUSG00000020184.16_117526148_117531930_1	chr10	-	616	2	ISM	ENSMUSG00000020184.16	ENST00000545204.2	816	3	13755	95	13755	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATGATTGTGCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	117531930	117526147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117526691_117531857
ENSMUSG00000020184.16_117526148_117541135_1	chr10	-	853	4	ISM	ENSMUSG00000020184.16	ENST00000299252.8	960	5	4550	27	4550	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATGATTGTGCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	117541135	117526147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117526691_117527049_117527128_117528486_117528643_117541059
ENSMUSG00000020184.16_117526148_117545684_1	chr10	-	623	2	FSM	ENSMUSG00000020184.16	ENST00000393413.7	651	2	1	27	1	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATGATTGTGCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	117545684	117526147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_117526691_117545604
ENSMUSG00000020184.16_117526267_117545646_1	chr10	-	775	5	FSM	ENSMUSG00000020184.16	ENST00000299252.8	960	5	39	146	39	-146	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGCGGCCTAAAAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	117545646	117526266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117541059_117541135_117545604
ENSMUSG00000020184.16_117526297_117545640_1	chr10	-	163	3	FSM	ENSMUSG00000020184.16	ENST00000517852.5	384	3	45	176	45	-176	multi-exon	TRUE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGCCATCGAACCATGT	NA	NA	NA	NA	NA	NA	NA	NA	117545640	117526296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_117526349_117541059_117541135_117545604
ENSMUSG00000020186.8_110755650_110767841_1	chr10	+	492	2	ISM	ENSMUSG00000020186.8	ENSMUST00000220409.2	780	5	-401	6959	0	-6959	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCGGGGCCTGCGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	110755649	110767841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_110756116_110767815
ENSMUSG00000020186.8_110755774_110767881_1	chr10	+	408	2	ISM	ENSMUSG00000020186.8	ENSMUST00000220409.2	780	5	-277	6919	124	-6919	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCAGTGCGATGGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	110755773	110767881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_110756116_110767815
ENSMUSG00000020186.8_110755919_110771149_1	chr10	+	451	3	ISM	ENSMUSG00000020186.8	ENSMUST00000220409.2	780	5	-132	3651	-132	-3651	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGACTGGGCATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	110755918	110771149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_110756116_110767815_110767929_110771008
ENSMUSG00000020186.8_110756054_110773727_1	chr10	+	474	4	ISM	ENSMUSG00000020186.8	ENSMUST00000220409.2	780	5	3	1073	3	-1073	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGCGCTGTCTCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	110756053	110773727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_110756116_110767815_110767929_110771008_110771178_110773597
ENSMUSG00000020186.8_110767815_110774591_1	chr10	+	507	4	ISM	ENSMUSG00000020186.8	ENSMUST00000220409.2	780	5	11764	209	11749	-209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAACTCGGTTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	110767814	110774591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_110767929_110771008_110771178_110773597_110773728_110774497
ENSMUSG00000020186.8_110771009_110774800_1	chr10	+	602	3	ISM	ENSMUSG00000020186.8	ENSMUST00000220409.2	780	5	14958	0	14943	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGCCTCCCCAACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	110771008	110774800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_110771178_110773597_110773728_110774497
ENSMUSG00000020186.8_110771087_110775189_1	chr10	+	433	4	ISM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	15437	294	15021	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCAGATGGCGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	110771086	110775189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_110771178_110773597_110773728_110774497_110774592_110775071
ENSMUSG00000020190.14_80502488_80507646_1	chr10	-	1669	11	ISM	ENSMUSG00000020190.14	ENSMUST00000003433.11	3065	12	164	1322	164	-1322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTCTGGGGTAGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	80507646	80502487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569
ENSMUSG00000020190.14_80502697_80511758_1	chr10	-	1674	13	ISM	ENSMUSG00000020190.14	ENSMUST00000200082.5	3439	14	369	1536	369	-1531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCCAGCCTGCACCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	80511758	80502696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657
ENSMUSG00000020196.11_75557153_75570889_1	chr10	-	1099	7	ISM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	29261	75207	29261	-75207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTGGAGAAGTGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	75570889	75557152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799
ENSMUSG00000020196.11_75574154_75582557_1	chr10	-	1071	7	ISM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	17593	92208	17593	-92208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGCAGAGCTCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	75582557	75574153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321
ENSMUSG00000020198.9_80543425_80545078_1	chr10	-	639	4	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	33020	635	33020	-635	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTGCCTCTGGAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	80545078	80543424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034
ENSMUSG00000020198.9_80543561_80545695_1	chr10	-	729	6	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	32403	771	32403	-771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGACCTGCACTCCTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	80545695	80543560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600
ENSMUSG00000020198.9_80543687_80545754_1	chr10	-	662	6	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	32344	897	32344	-897	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGCGTCTTACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	80545754	80543686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600
ENSMUSG00000020198.9_80544636_80548007_1	chr10	-	686	7	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	30091	1846	30091	-1846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGTCTTTCCAGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	80548007	80544635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945
ENSMUSG00000020198.9_80545604_80548738_1	chr10	-	687	6	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	29360	2814	29360	-2814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGAGCCTACCCTTCGG	NA	NA	NA	NA	NA	NA	NA	NA	80548738	80545603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598
ENSMUSG00000020198.9_80545722_80549451_1	chr10	-	656	7	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	28647	2932	28647	-2932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGCAGCTTCCTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	80549451	80545721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390
ENSMUSG00000020198.9_80546562_80549960_1	chr10	-	667	6	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	28138	3772	28138	-3772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTGCGGCAGCAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	80549960	80546561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806
ENSMUSG00000020198.9_80548622_80551813_1	chr10	-	662	6	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	26285	5832	26285	-5832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAGAGAAGAAGGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	80551813	80548621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704
ENSMUSG00000020198.9_80549939_80553696_1	chr10	-	656	6	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	24402	7149	24402	-7149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGCTGGAGAAGGACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	80553696	80549938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532
ENSMUSG00000020198.9_80551732_80555013_1	chr10	-	664	4	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	23085	8942	23085	-8942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGGATGAAGAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	80555013	80551731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80551847_80552307_80552454_80553532_80553765_80554842
ENSMUSG00000020198.9_80551803_80555082_1	chr10	-	662	4	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	23016	9013	23016	-9013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGAGGATGAGAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	80555082	80551802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80551847_80552307_80552454_80553532_80553765_80554842
ENSMUSG00000020198.9_80555571_80563823_1	chr10	-	677	8	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	14275	12781	14275	-12781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGCAGTGCCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	80563823	80555570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715
ENSMUSG00000020198.9_80559525_80577805_1	chr10	-	712	7	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	293	16735	293	-16735	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGCTGAGGGATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	80577805	80559524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ENSMUSG00000020198.9_80562926_80577946_1	chr10	-	675	6	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	152	20136	152	-20136	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCGGCTTAAGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	80577946	80562925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ENSMUSG00000020205.9_111342554_111344026_1	chr10	+	1062	2	FSM	ENSMUSG00000020205.9	ENSMUST00000164773.2	1949	2	407	480	407	-480	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCGACGGATAACGCGCG	NA	NA	NA	NA	NA	NA	NA	NA	111342553	111344026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_111343510_111343920
ENSMUSG00000020205.9_111343065_111344506_1	chr10	+	1031	2	FSM	ENSMUSG00000020205.9	ENSMUST00000164773.2	1949	2	918	0	918	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTAAAGGTCTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	111343064	111344506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_111343510_111343920
ENSMUSG00000020212.15_117982570_117994255_1	chr10	+	1030	7	ISM	ENSMUSG00000020212.15	ENSMUST00000164077.9	2922	13	4741	10647	4720	-9813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAGAAAAGTTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	117982569	117994255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206
ENSMUSG00000020212.15_117982757_117994390_1	chr10	+	978	7	ISM	ENSMUSG00000020212.15	ENSMUST00000164077.9	2922	13	4928	10512	4907	-9678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGCCCAGGGCGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	117982756	117994390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206
ENSMUSG00000020212.15_117993211_118004068_1	chr10	+	1008	7	ISM	ENSMUSG00000020212.15	ENSMUST00000169817.3	2022	14	15361	0	15361	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTCATCTTATCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	117993210	118004068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ENSMUSG00000020212.15_117995606_118004557_1	chr10	+	978	4	ISM	ENSMUSG00000020212.15	ENSMUST00000163238.9	2461	15	17842	-271	17756	271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACAAAATTTGCTGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	117995605	118004557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_117995675_118000105_118000353_118002529_118002590_118003955
ENSMUSG00000020212.15_118000267_118004780_1	chr10	+	971	3	ISM	ENSMUSG00000020212.15	ENSMUST00000020437.13	3074	14	22530	122	22417	-122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTTAATCAAAAATTATA	NA	NA	NA	NA	NA	NA	NA	NA	118000266	118004780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_118000353_118002529_118002590_118003955
ENSMUSG00000020219.8_80735284_80736619_1	chr10	-	1041	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	184	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCCCATCGGACTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	80736619	80735283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80736094_80736315_80736385_80736457
ENSMUSG00000020219.8_80735284_80736686_1	chr10	-	1108	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	117	0	-67	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCCCATCGGACTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	80736686	80735283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80736094_80736315_80736385_80736457
ENSMUSG00000020219.8_80735409_80736803_1	chr10	-	1100	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	0	125	0	-125	multi-exon	FALSE	canonical	NA	NA	NA	NA	2258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAAGCACCAAAGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	80736803	80735408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80736094_80736315_80736385_80736457
ENSMUSG00000020224.16_120062975_120064095_1	chr10	+	271	2	ISM	ENSMUSG00000020224.16	ENSMUST00000020444.16	1664	3	0	4392	0	-3881	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAGGAAAAGGGTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	120062974	120064095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_120063029_120063878
ENSMUSG00000020224.16_120063886_120067195_1	chr10	+	311	2	ISM	ENSMUSG00000020224.16	ENSMUST00000130198.3	1463	3	795	781	795	-781	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAGAAAAAGACTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	120063885	120067195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_120064109_120067107
ENSMUSG00000020225.11_120044698_120060678_2	chr10	+	717	7	FSM	ENSMUSG00000020225.11	ENSMUST00000020446.11	904	7	43	144	13	-144	multi-exon	FALSE	canonical	NA	NA	NA	NA	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCTCTTCCTGCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	120044697	120060678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_120044848_120051445_120051555_120053408_120053515_120056655_120056690_120057910_120058029_120059741_120059788_120060524
ENSMUSG00000020225.11_120051445_120060822_2	chr10	+	712	6	ISM	ENSMUSG00000020225.11	ENSMUST00000020446.11	904	7	6790	0	6760	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTCTTCTATAATT	NA	NA	NA	NA	NA	NA	NA	NA	120051444	120060822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_120051555_120053408_120053515_120056655_120056690_120057910_120058029_120059741_120059788_120060524
ENSMUSG00000020230.16_76043056_76045308_1	chr10	-	881	3	ISM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	28363	-5	28362	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTCTGTTTCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	76045308	76043055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76043628_76044245_76044418_76045171
ENSMUSG00000020230.16_76043160_76046361_1	chr10	-	907	4	ISM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	27310	99	27309	-94	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCAGTGGACTCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	76046361	76043159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231
ENSMUSG00000020230.16_76043334_76053198_1	chr10	-	784	5	ISM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	20473	273	20472	-268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACATTTCAGCCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	76053198	76043333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147
ENSMUSG00000020230.16_76043349_76053292_1	chr10	-	863	5	ISM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	20379	288	20378	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATTCCCCCAGACACAC	NA	NA	NA	NA	NA	NA	NA	NA	76053292	76043348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147
ENSMUSG00000020230.16_76043459_76056885_1	chr10	-	838	6	ISM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	16786	398	16785	-393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACAGCTCACCCGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	76056885	76043458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831
ENSMUSG00000020230.16_76043499_76056948_1	chr10	-	861	6	ISM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	16723	438	16722	-433	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGACCCCTTCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	76056948	76043498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831
ENSMUSG00000020230.16_76043586_76058327_1	chr10	-	867	7	ISM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	15344	525	15343	-520	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCGTGGGAGCTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	76058327	76043585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282
ENSMUSG00000020230.16_76044252_76058444_1	chr10	-	936	6	ISM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	15227	1191	15226	-1186	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGAGTAAGATGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	76058444	76044251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282
ENSMUSG00000020230.16_76044376_76061171_1	chr10	-	862	7	ISM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	12500	1315	12499	-1310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCGGTCCACACGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	76061171	76044375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282_76058445_76061121
ENSMUSG00000020230.16_76045172_76061304_1	chr10	-	953	6	ISM	ENSMUSG00000020230.16	ENSMUST00000099572.10	2100	11	12366	2106	12366	-2106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAGCCTACCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	76061304	76045171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282_76058445_76061121
ENSMUSG00000020230.16_76053264_76073647_1	chr10	-	873	7	ISM	ENSMUSG00000020230.16	ENSMUST00000099571.10	2052	11	52	10208	23	-10198	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCTGGCCAACCACGGC	NA	NA	NA	NA	NA	NA	NA	NA	76073647	76053263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76053324_76056831_76056997_76058282_76058445_76061121_76061305_76062023_76062150_76072545_76072659_76073583
ENSMUSG00000020232.18_81181885_81182824_1	chr10	-	710	3	ISM	ENSMUSG00000020232.18	ENSMUST00000122993.8	1502	9	3201	0	3201	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTTAATATTTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	81182824	81181884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81182312_81182393_81182527_81182674
ENSMUSG00000020232.18_81181885_81186151_1	chr10	-	1431	10	FSM	ENSMUSG00000020232.18	ENSMUST00000105324.9	1540	10	109	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTTAATATTTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	81186151	81181884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186106
ENSMUSG00000020232.18_81182832_81186258_1	chr10	-	687	8	ISM	ENSMUSG00000020232.18	ENSMUST00000105323.8	1463	10	56	950	0	-946	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTGCTGCAGCGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	81186258	81182831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186240
ENSMUSG00000020235.17_81203343_81204400_1	chr10	-	284	4	ISM	ENSMUSG00000020235.17	ENSMUST00000118812.2	1215	11	2847	0	2847	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCGCAGGCGGGATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	81204400	81203342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356
ENSMUSG00000020235.17_81204382_81204989_1	chr10	-	291	2	ISM	ENSMUSG00000020235.17	ENSMUST00000118812.2	1215	11	2258	1039	2258	-1039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCCAAGCACGCCAATG	NA	NA	NA	NA	NA	NA	NA	NA	81204989	81204381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81204591_81204907
ENSMUSG00000020235.17_81204519_81205237_1	chr10	-	323	3	ISM	ENSMUSG00000020235.17	ENSMUST00000118812.2	1215	11	2010	1176	2010	-1176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCTGGTCCCCACACCA	NA	NA	NA	NA	NA	NA	NA	NA	81205237	81204518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81204591_81204907_81205093_81205171
ENSMUSG00000020235.17_81204981_81206042_1	chr10	-	292	4	ISM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	8308	2925	1205	-1638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGCAGGAAGTGTGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	81206042	81204980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81205093_81205171_81205275_81205804_81205871_81206031
ENSMUSG00000020235.17_81205037_81206094_1	chr10	-	288	4	ISM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	8256	2981	1153	-1694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGCGGGATATCCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	81206094	81205036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81205093_81205171_81205275_81205804_81205871_81206031
ENSMUSG00000020235.17_81205078_81206155_1	chr10	-	308	4	ISM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	8195	3022	1092	-1735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGACCAGTTGTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	81206155	81205077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81205093_81205171_81205275_81205804_81205871_81206031
ENSMUSG00000020235.17_81206089_81206627_1	chr10	-	307	3	ISM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	7723	4033	620	-2746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCAGCGTGGGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	81206627	81206088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81206216_81206298_81206382_81206530
ENSMUSG00000020235.17_81206189_81206831_1	chr10	-	281	4	ISM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	7519	4133	416	-2846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCACACGCAAGATCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	81206831	81206188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81206216_81206298_81206382_81206530_81206659_81206788
ENSMUSG00000020235.17_81206620_81207247_1	chr10	-	298	4	ISM	ENSMUSG00000020235.17	ENSMUST00000118812.2	1215	11	0	3277	0	-3277	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGCCGGCATCGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	81207247	81206619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81206659_81206788_81206853_81206928_81207055_81207178
ENSMUSG00000020238.15_81322291_81324080_1	chr10	-	1334	4	ISM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	8080	0	8080	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCCAGGTGTCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	81324080	81322290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028
ENSMUSG00000020238.15_81322513_81324300_1	chr10	-	1260	5	ISM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	7860	222	7860	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGGCTCAGCCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	81324300	81322512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261
ENSMUSG00000020238.15_81322636_81324475_1	chr10	-	1230	6	ISM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	7685	345	7685	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGAAGACCAGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	81324475	81322635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382
ENSMUSG00000020238.15_81322818_81325895_1	chr10	-	1303	7	ISM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	6265	527	6265	-527	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGGGGAGTCCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	81325895	81322817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635
ENSMUSG00000020238.15_81322932_81326102_1	chr10	-	1290	8	ISM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	6058	641	6058	-641	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGCTCAGTCCTGACGCT	NA	NA	NA	NA	NA	NA	NA	NA	81326102	81322931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060
ENSMUSG00000020238.15_81323214_81328921_1	chr10	-	1360	12	ISM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	3239	923	3239	-923	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTGGGATGGAATGATG	NA	NA	NA	NA	NA	NA	NA	NA	81328921	81323213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896
ENSMUSG00000020238.15_81323334_81328981_1	chr10	-	1300	12	ISM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	3179	1043	3179	-1043	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCGGCCAGACCGAACGAA	NA	NA	NA	NA	NA	NA	NA	NA	81328981	81323333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896
ENSMUSG00000020238.15_81323399_81329030_1	chr10	-	1284	12	ISM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	3130	1108	3130	-1108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCCAAGGCACAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	81329030	81323398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896
ENSMUSG00000020238.15_81323538_81329235_1	chr10	-	1283	12	ISM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	2925	1247	2925	-1247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGGCGTACACAGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	81329235	81323537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182
ENSMUSG00000020238.15_81323680_81329379_1	chr10	-	1373	11	ISM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	2781	1389	2781	-1389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATGGGCCAGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	81329379	81323679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182
ENSMUSG00000020238.15_81324060_81331941_1	chr10	-	1309	11	ISM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	219	1769	219	-1769	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGACAGCACCATGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	81331941	81324059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ENSMUSG00000020238.15_81324060_81331995_1	chr10	-	1363	11	ISM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	165	1769	165	-1769	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGACAGCACCATGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	81331995	81324059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ENSMUSG00000020238.15_81324278_81332160_1	chr10	-	1382	10	ISM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	0	1987	0	-1987	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCACGGAGCAGATGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	81332160	81324277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ENSMUSG00000020241.14_76431596_76439552_1	chr10	-	1346	3	ISM	ENSMUSG00000020241.14	ENSMUST00000001181.13	3949	28	19912	0	19607	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTGCCAGGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	76439552	76431595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76432646_76439162_76439202_76439295
ENSMUSG00000020241.14_76431596_76439625_1	chr10	-	1419	3	ISM	ENSMUSG00000020241.14	ENSMUST00000001181.13	3949	28	19839	0	19534	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTGCCAGGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	76439625	76431595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76432646_76439162_76439202_76439295
ENSMUSG00000020241.14_76431817_76439939_1	chr10	-	1371	4	ISM	ENSMUSG00000020241.14	ENSMUST00000001181.13	3949	28	19525	221	19220	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCAGAGTCTTCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	76439939	76431816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76432646_76439162_76439202_76439295_76439749_76439889
ENSMUSG00000020241.14_76432383_76444003_1	chr10	-	1392	13	ISM	ENSMUSG00000020241.14	ENSMUST00000001181.13	3949	28	15461	787	15156	-787	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACCTCAATTCCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	76444003	76432382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76432646_76439162_76439202_76439295_76439749_76439889_76440043_76440178_76440225_76440682_76440719_76440893_76440957_76441607_76441671_76442005_76442042_76442408_76442460_76442928_76442992_76443560_76443624_76443940
ENSMUSG00000020241.14_76432581_76445386_1	chr10	-	1380	16	ISM	ENSMUSG00000020241.14	ENSMUST00000001181.13	3949	28	14078	985	13773	-985	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTGGGCGAGCAGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	76445386	76432580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76432646_76439162_76439202_76439295_76439749_76439889_76440043_76440178_76440225_76440682_76440719_76440893_76440957_76441607_76441671_76442005_76442042_76442408_76442460_76442928_76442992_76443560_76443624_76443940_76444004_76444541_76444605_76445090_76445181_76445353
ENSMUSG00000020241.14_76439391_76446907_1	chr10	-	1373	17	ISM	ENSMUSG00000020241.14	ENSMUST00000105413.8	4653	28	12252	5722	12252	-5722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGACAAGCCACAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	76446907	76439390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_76439749_76439889_76440043_76440178_76440225_76440682_76440719_76440893_76440957_76441607_76441671_76442005_76442042_76442408_76442460_76442928_76442992_76443560_76443624_76443940_76444004_76444541_76444605_76445090_76445181_76445353_76445417_76445993_76446057_76446483_76446538_76446862
ENSMUSG00000020241.14_76439493_76447667_1	chr10	-	1361	18	NNC	ENSMUSG00000020241.14	novel	3949	28	NA	NA	11492	-5824	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCTTCGGGCACTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	76447667	76439492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76439749_76439889_76440043_76440178_76440225_76440682_76440719_76440893_76440957_76441607_76441671_76442005_76442042_76442408_76442460_76442928_76442992_76443560_76443624_76443940_76444004_76444541_76444605_76445090_76445181_76445353_76445417_76445993_76446057_76446483_76446538_76446862_76446908_76447577
ENSMUSG00000020241.14_76439596_76449133_1	chr10	-	1364	20	NNC	ENSMUSG00000020241.14	novel	3949	28	NA	NA	10026	-5927	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCCTATAATCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	76449133	76439595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76439749_76439889_76440043_76440178_76440225_76440682_76440719_76440893_76440957_76441607_76441671_76442005_76442042_76442408_76442460_76442928_76442992_76443560_76443624_76443940_76444004_76444541_76444605_76445090_76445181_76445353_76445417_76445993_76446057_76446483_76446538_76446862_76446908_76447573_76447671_76447781_76447836_76449088
ENSMUSG00000020241.14_76439698_76450232_1	chr10	-	1354	21	NNC	ENSMUSG00000020241.14	novel	3949	28	NA	NA	8927	-6029	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGGCTGGACGACGAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	76450232	76439697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76439749_76439889_76440043_76440178_76440225_76440682_76440719_76440893_76440957_76441607_76441671_76442005_76442042_76442408_76442460_76442928_76442992_76443560_76443624_76443940_76444004_76444541_76444605_76445090_76445181_76445353_76445417_76445993_76446057_76446483_76446538_76446862_76446908_76447577_76447671_76447781_76447836_76449088_76449155_76450157
ENSMUSG00000020241.14_76439919_76450314_1	chr10	-	1360	20	NNC	ENSMUSG00000020241.14	novel	3949	28	NA	NA	8845	-6250	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGCCAAGGACCCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	76450314	76439918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76440043_76440178_76440225_76440682_76440719_76440893_76440957_76441607_76441671_76442005_76442042_76442408_76442460_76442928_76442992_76443560_76443624_76443940_76444004_76444541_76444605_76445090_76445181_76445353_76445417_76445993_76446057_76446483_76446538_76446862_76446908_76447573_76447671_76447781_76447836_76449088_76449155_76450157
ENSMUSG00000020241.14_76441642_76450606_1	chr10	-	1345	16	NNC	ENSMUSG00000020241.14	novel	3949	28	NA	NA	8553	-7973	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACCCGGACGGAAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	76450606	76441641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76441671_76442005_76442042_76442408_76442460_76442928_76442992_76443560_76443624_76443940_76444004_76444541_76444605_76445090_76445181_76445353_76445417_76445993_76446057_76446483_76446538_76446862_76446908_76447577_76447671_76447781_76447836_76449088_76449155_76450157
ENSMUSG00000020241.14_76442937_76450739_1	chr10	-	1366	14	NNC	ENSMUSG00000020241.14	novel	3949	28	NA	NA	8420	-9268	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAAGGTATATCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	76450739	76442936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76442992_76443560_76443624_76443940_76444004_76444541_76444605_76445090_76445181_76445353_76445417_76445993_76446057_76446483_76446538_76446862_76446908_76447573_76447671_76447781_76447836_76449088_76449155_76449942_76449964_76450170
ENSMUSG00000020241.14_76445090_76459159_1	chr10	-	1397	12	NNC	ENSMUSG00000020241.14	novel	4653	28	NA	NA	0	-11421	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTATTCTGCACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	76459159	76445089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76445181_76445353_76445417_76445993_76446057_76446483_76446538_76446862_76446908_76447577_76447671_76447781_76447836_76449088_76449155_76449942_76449964_76450170_76450770_76450879_76451053_76459084
ENSMUSG00000020241.14_76446036_76459320_1	chr10	-	1358	9	NNC	ENSMUSG00000020241.14	novel	3949	28	NA	NA	144	-12367	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGGAAGCCCAGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	76459320	76446035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_76446057_76446483_76446538_76446862_76446908_76447573_76447671_76447781_76447836_76449088_76449155_76450157_76450770_76450879_76451053_76459084
ENSMUSG00000020246.14_82535045_82547708_1	chr10	+	740	6	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	204	30554	204	-30554	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTGAGACTTCCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	82535044	82547708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82535141_82536752_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668
ENSMUSG00000020246.14_82536814_82547951_1	chr10	+	718	6	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	1973	30311	1973	-30311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCAGGACACTGCGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	82536813	82547951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883
ENSMUSG00000020246.14_82538376_82559508_1	chr10	+	708	6	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	3535	18754	3535	-18754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCAAGTGGGATGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	82538375	82559508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452
ENSMUSG00000020246.14_82544994_82564155_1	chr10	+	729	7	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	10153	14107	10153	-14107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTCGAGAGCAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	82544993	82564155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086
ENSMUSG00000020246.14_82547669_82568510_1	chr10	+	766	6	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	12828	9752	12828	-9752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTATGACATGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	82547668	82568510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436
ENSMUSG00000020246.14_82548010_82574154_1	chr10	+	707	7	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	13169	4108	13169	-4108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATCTTGTTCCAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	82548009	82574154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112
ENSMUSG00000020246.14_82560179_82574883_1	chr10	+	689	6	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	25338	3379	25338	-3379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTTGGCTATCCGCACA	NA	NA	NA	NA	NA	NA	NA	NA	82560178	82574883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813
ENSMUSG00000020246.14_82564183_82575029_1	chr10	+	687	5	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	29342	3233	29342	-3233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTTCAGAATATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	82564182	82575029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813
ENSMUSG00000020246.14_82570198_82577242_1	chr10	+	718	4	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	35357	1020	35357	-1020	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTCCATTGGCATTAC	NA	NA	NA	NA	NA	NA	NA	NA	82570197	82577242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82570316_82574112_82574299_82574813_82575100_82577114
ENSMUSG00000020246.14_82574162_82577418_1	chr10	+	727	3	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	39321	844	39321	-844	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTGCACGTCGTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	82574161	82577418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82574299_82574813_82575100_82577114
ENSMUSG00000020246.14_82574211_82577494_1	chr10	+	754	3	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	39370	768	39370	-768	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	82574210	82577494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82574299_82574813_82575100_82577114
ENSMUSG00000020246.14_82574899_82577629_1	chr10	+	716	2	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	40058	633	40058	-633	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCCAAGAGGATTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	82574898	82577629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82575100_82577114
ENSMUSG00000020246.14_82574974_82577696_1	chr10	+	708	2	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	40133	566	40133	-566	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCACAAGCCTCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	82574973	82577696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82575100_82577114
ENSMUSG00000020248.19_82584535_82586651_1	chr10	-	1827	2	ISM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	13327	0	13327	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCCTTGCGTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	82586651	82584534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_82586282_82586571
ENSMUSG00000020248.19_82584677_82588384_1	chr10	-	1911	4	ISM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	11594	142	11594	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATCGCCTATTGCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	82588384	82584676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240
ENSMUSG00000020248.19_82584745_82588384_1	chr10	-	1843	4	ISM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	11594	210	11594	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACGCATGGTCTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	82588384	82584744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240
ENSMUSG00000020248.19_82584871_82590822_1	chr10	-	1795	5	ISM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	9156	336	9156	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTTTGATAAATTCATT	NA	NA	NA	NA	NA	NA	NA	NA	82590822	82584870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798
ENSMUSG00000020248.19_82584999_82590929_1	chr10	-	1774	5	ISM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	9049	464	9049	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATCCTCTTCCTCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	82590929	82584998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798
ENSMUSG00000020248.19_82585121_82599935_1	chr10	-	1925	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	43	586	43	-586	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGAAATTTTGGGTACT	NA	NA	NA	NA	NA	NA	NA	NA	82599935	82585120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ENSMUSG00000020248.19_82585276_82599978_1	chr10	-	1813	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	0	741	0	-741	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTAGTGGTGTGTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	82599978	82585275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ENSMUSG00000020250.12_82695078_82717728_1	chr10	+	804	7	ISM	ENSMUSG00000020250.12	ENSMUST00000020484.9	3325	14	65	15818	37	-14711	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACATGGAAGAACATGG	NA	NA	NA	NA	NA	NA	NA	NA	82695077	82717728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82695135_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556
ENSMUSG00000020250.12_82696339_82719840_1	chr10	+	1020	8	ISM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	1298	12599	204	-12599	internal_fragment	TRUE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGAGCGGGCCTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	82696338	82719840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747
ENSMUSG00000020250.12_82710496_82720833_1	chr10	+	980	9	ISM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	15455	11606	14361	-11606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGGTGACATCCTGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	82710495	82720833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775
ENSMUSG00000020250.12_82713099_82721127_1	chr10	+	1041	8	ISM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	18058	11312	16964	-11312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTCTTTGCCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	82713098	82721127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019
ENSMUSG00000020250.12_82715123_82726243_1	chr10	+	959	9	ISM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	20082	6196	18988	-6196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCCAAACGCTGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	82715122	82726243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217
ENSMUSG00000020250.12_82715650_82731832_1	chr10	+	964	9	ISM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	20609	607	19515	-607	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCGCTCTGGGGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	82715649	82731832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ENSMUSG00000020250.12_82717646_82731959_1	chr10	+	952	8	ISM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	22605	480	21511	-480	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGGTCCTAGGCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	82717645	82731959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ENSMUSG00000020250.12_82719748_82732146_1	chr10	+	1002	7	ISM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	24707	293	23613	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTGGGCAGTGACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	82719747	82732146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ENSMUSG00000020250.12_82720319_82732284_1	chr10	+	1047	6	ISM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	25278	155	24184	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGGGAATATTAGCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	82720318	82732284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ENSMUSG00000020250.12_82721020_82732439_1	chr10	+	968	4	ISM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	25979	0	24885	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTGTAGCATTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	82721019	82732439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82721128_82723006_82723103_82726217_82726353_82731810
ENSMUSG00000020250.12_82726246_82732663_1	chr10	+	960	2	ISM	ENSMUSG00000020250.12	ENSMUST00000219442.3	3531	14	30111	881	30111	224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACGCTTAATTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	82726245	82732663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82726353_82731810
ENSMUSG00000020251.14_82487142_82495441_1	chr10	-	586	4	ISM	ENSMUSG00000020251.14	ENSMUST00000020485.10	2153	10	31043	875	31010	-875	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCCCTCTGTATCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	82495441	82487141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_82487353_82488701_82488815_82490515_82490683_82495346
ENSMUSG00000020253.16_106072150_106074998_1	chr9	-	1219	8	ISM	ENSMUSG00000020253.16	ENSMUST00000076258.13	1811	10	1143	0	1143	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTCTCTCTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	106074998	106072149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106074539_106074940
ENSMUSG00000020253.16_106072509_106076305_1	chr9	-	1318	10	FSM	ENSMUSG00000020253.16	ENSMUST00000140761.9	1846	10	169	359	-164	-359	multi-exon	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGAACTTCCTCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	106076305	106072508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106074539_106074940_106075196_106075299_106075424_106076168
ENSMUSG00000020253.16_106072574_106076336_1	chr9	-	1284	10	FSM	ENSMUSG00000020253.16	ENSMUST00000140761.9	1846	10	138	424	138	-424	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGATTCCTTTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	106076336	106072573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106074539_106074940_106075196_106075299_106075424_106076168
ENSMUSG00000020253.16_106072616_106076474_1	chr9	-	1380	10	FSM	ENSMUSG00000020253.16	ENSMUST00000140761.9	1846	10	0	466	0	-466	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACCGGAGAGGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	106076474	106072615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106074539_106074940_106075196_106075299_106075424_106076168
ENSMUSG00000020257.14_106048409_106067811_1	chr9	+	2938	9	FSM	ENSMUSG00000020257.14	ENSMUST00000020490.13	3747	9	282	527	282	-527	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTGTCCAGGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	106048408	106067811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ENSMUSG00000020258.17_106032848_106034449_1	chr9	-	565	2	ISM	ENSMUSG00000020258.17	ENST00000305690.12	1315	3	655	287	655	-287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGGCTCTGGAAGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	106034449	106032847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106033307_106034343
ENSMUSG00000020258.17_106032903_106034475_1	chr9	-	536	2	ISM	ENSMUSG00000020258.17	ENST00000305690.12	1315	3	629	342	629	-342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCGGAACTCCATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	106034475	106032902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106033307_106034343
ENSMUSG00000020258.17_106033000_106034495_1	chr9	-	459	2	ISM	ENSMUSG00000020258.17	ENST00000305690.12	1315	3	609	439	609	-439	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGTGATGTAAAAAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	106034495	106032999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106033307_106034343
ENSMUSG00000020258.17_106033124_106034847_1	chr9	-	495	3	FSM	ENSMUSG00000020258.17	ENST00000305690.12	1315	3	257	563	257	-563	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCACACACCTGTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	106034847	106033123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_106033307_106034343_106034496_106034687
ENSMUSG00000020258.17_106034346_106035060_1	chr9	-	523	2	ISM	ENSMUSG00000020258.17	ENST00000305690.12	1315	3	44	1785	44	-1785	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTGGGACCAGCCGACA	NA	NA	NA	NA	NA	NA	NA	NA	106035060	106034345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106034496_106034687
ENSMUSG00000020260.10_77096525_77102800_1	chr10	+	637	6	ISM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	1473	2609	1473	-2609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACTTCATCTGGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	77096524	77102800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77096659_77098270_77098416_77099098_77099210_77100789_77100857_77101669_77101796_77102746
ENSMUSG00000020260.10_77098282_77103141_1	chr10	+	743	6	ISM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	3230	2268	3230	-2268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGGGTCCACGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	77098281	77103141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77098416_77099098_77099210_77100789_77100857_77101669_77101796_77102746_77102928_77103017
ENSMUSG00000020260.10_77099096_77104372_1	chr10	+	624	6	ISM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	4044	1037	4044	-1037	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCTGTTTCCACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	77099095	77104372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77099210_77100789_77100857_77101669_77101796_77102746_77102928_77103017_77103142_77104360
ENSMUSG00000020260.10_77100789_77104542_1	chr10	+	681	5	ISM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	5737	867	5737	-867	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGTCACAGGGTCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	77100788	77104542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77100857_77101669_77101796_77102746_77102928_77103017_77103142_77104360
ENSMUSG00000020260.10_77101755_77104678_1	chr10	+	664	4	ISM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	6703	731	6703	-731	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACCTGAGAACCCACG	NA	NA	NA	NA	NA	NA	NA	NA	77101754	77104678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77101796_77102746_77102928_77103017_77103142_77104360
ENSMUSG00000020261.16_55095200_55119031_1	chr11	+	1191	10	FSM	ENSMUSG00000020261.16	ENST00000521925.5	1301	10	-60	170	-2	-170	multi-exon	TRUE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGTACTCCATAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	55095199	55119031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_55095361_55104735_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012
ENSMUSG00000020261.16_55095310_55119083_1	chr11	+	1133	10	FSM	ENSMUSG00000020261.16	ENST00000521925.5	1301	10	50	118	50	-118	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGAGATCATCATCCCG	NA	NA	NA	NA	NA	NA	NA	NA	55095309	55119083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_55095361_55104735_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012
ENSMUSG00000020261.16_55104736_55119201_1	chr11	+	1200	9	ISM	ENSMUSG00000020261.16	ENSMUST00000108867.2	1611	10	115	4306	115	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCATTTCCTTAAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	55104735	55119201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012
ENSMUSG00000020263.15_83436606_83441669_1	chr10	-	572	5	ISM	ENSMUSG00000020263.15	ENSMUST00000020500.14	3020	21	42933	709	42933	-709	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAAATGGGTGAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	83441669	83436605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623
ENSMUSG00000020263.15_83436793_83441798_1	chr10	-	514	5	ISM	ENSMUSG00000020263.15	ENSMUST00000020500.14	3020	21	42804	896	42804	-896	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCGCAGAATCTGAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	83441798	83436792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623
ENSMUSG00000020263.15_83441746_83448668_1	chr10	-	547	7	ISM	ENSMUSG00000020263.15	ENSMUST00000020500.14	3020	21	35934	5849	35934	-5849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAGACAGCACGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	83448668	83441745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575
ENSMUSG00000020263.15_83444888_83450095_1	chr10	-	538	6	ISM	ENSMUSG00000020263.15	ENSMUST00000020500.14	3020	21	34507	8991	34507	-8991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAACTGATTGCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	83450095	83444887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007
ENSMUSG00000020263.15_83448597_83456695_1	chr10	-	544	4	ISM	ENSMUSG00000020263.15	ENSMUST00000020500.14	3020	21	27907	12700	27907	-12700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCACGCCCAGTGGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	83456695	83448596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_83448765_83450007_83450167_83453210_83453294_83456561
ENSMUSG00000020263.15_83450123_83464166_1	chr10	-	537	7	ISM	ENSMUSG00000020263.15	ENSMUST00000020500.14	3020	21	20436	14226	20436	-14226	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCAAGAGTTGCTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	83464166	83450122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092
ENSMUSG00000020265.17_77441931_77452237_1	chr10	+	702	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	0	1928	0	96	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTTTGGTTTGGGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	77441930	77452237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
ENSMUSG00000020265.17_77442031_77452301_1	chr10	+	666	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	100	1864	-28	160	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCCATCCCTAACATTT	NA	NA	NA	NA	NA	NA	NA	NA	77442030	77452301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
ENSMUSG00000020265.17_77445672_77452582_2	chr10	+	776	3	ISM	ENSMUSG00000020265.17	ENSMUST00000099538.6	1874	4	3267	674	3267	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGTGCTTCTTAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	77445671	77452582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77445775_77449813_77449886_77451981
ENSMUSG00000020267.7_54757209_54761327_1	chr11	+	629	3	NNC	ENSMUSG00000020267.7	novel	636	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4937	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTGTTACTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	54757208	54761327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_54757427_54760673_54760779_54761021
ENSMUSG00000020271.18_32592784_32694753_1	chr11	+	1886	12	NNC	ENSMUSG00000020271.18	novel	1920	12	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCAGCGCTTCCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	32592783	32694753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681478_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUSG00000020271.18_32592784_32695872_1	chr11	+	3064	13	FSM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	60	697	38	-697	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACGGTTTTAAAGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	32592783	32695872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUSG00000020271.18_32592866_32695940_1	chr11	+	3050	13	FSM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	142	629	0	-629	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGAGAGAAGGCCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	32592865	32695940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUSG00000020271.18_32592904_32695999_1	chr11	+	3071	13	FSM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	180	570	29	-570	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGGATGTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	32592903	32695999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUSG00000020271.18_32661936_32696248_1	chr11	+	3061	11	ISM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	69212	321	69061	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGTCGGACATTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	32661935	32696248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUSG00000020271.18_32670522_32696368_1	chr11	+	3069	10	ISM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	77798	201	77647	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACTTGGGTACCCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	32670521	32696368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUSG00000020271.18_32670580_32696442_1	chr11	+	3085	10	ISM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	77856	127	77705	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTAACTGTAACTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	32670579	32696442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUSG00000020271.18_32672074_32696569_1	chr11	+	3114	9	ISM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	79350	0	79199	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTATTGAAACTGTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	32672073	32696569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUSG00000020271.18_32688394_32696816_1	chr11	+	2750	5	ISM	ENSMUSG00000020271.18	ENSMUST00000076383.8	4019	14	95519	0	95519	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTTGTCTTGCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	32688393	32696816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUSG00000020273.14_23812646_23832294_1	chr11	-	3040	16	ISM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	12959	0	12942	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGTCTTTAATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	23832294	23812645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182
ENSMUSG00000020273.14_23812960_23835572_1	chr11	-	2972	19	ISM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	9681	314	9664	-314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCAGTGGATTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	23835572	23812959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490
ENSMUSG00000020273.14_23813308_23845236_1	chr11	-	3068	22	FSM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	17	662	0	-662	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGAGGATTAGTCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	23845236	23813307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ENSMUSG00000020273.14_23813365_23845236_1	chr11	-	3011	22	FSM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	17	719	0	-719	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCACATGAATATTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	23845236	23813364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ENSMUSG00000020277.11_77822781_77826056_1	chr10	-	1872	6	ISM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	19585	0	19585	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTCGCCAGACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	77826056	77822780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975
ENSMUSG00000020277.11_77822947_77827212_1	chr10	-	1968	8	ISM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	18429	166	18429	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCATCTGGCTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	77827212	77822946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187
ENSMUSG00000020277.11_77823112_77827899_1	chr10	-	1916	9	ISM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	17742	331	17742	-331	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGGAGGCTGTTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	77827899	77823111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849
ENSMUSG00000020277.11_77823271_77829279_1	chr10	-	1989	11	ISM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	16362	490	16362	-490	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCGGGACGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	77829279	77823270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215
ENSMUSG00000020277.11_77823523_77832167_1	chr10	-	1942	14	ISM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	13474	742	13474	-742	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGATCTTAACCGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	77832167	77823522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153
ENSMUSG00000020277.11_77823638_77833383_1	chr10	-	1932	15	ISM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	12258	857	12258	-857	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACTGTAGCTGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	77833383	77823637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357
ENSMUSG00000020277.11_77823744_77835768_1	chr10	-	2005	16	ISM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	9873	963	9873	-963	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCATGGTCACTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	77835768	77823743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659
ENSMUSG00000020277.11_77823920_77836568_1	chr10	-	1933	18	ISM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	9073	1139	9073	-1139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACTGTGCTGCTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	77836568	77823919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509
ENSMUSG00000020277.11_77824037_77837187_1	chr10	-	1966	19	ISM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	8454	1256	8454	-1256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTACTGTTCCTGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	77837187	77824036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144
ENSMUSG00000020277.11_77824116_77837213_1	chr10	-	1913	19	ISM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	8428	1335	8428	-1335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGACTATGTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	77837213	77824115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144
ENSMUSG00000020277.11_77824165_77837313_1	chr10	-	1964	19	ISM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	8328	1384	8328	-1384	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAATCTGCGGCTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	77837313	77824164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144
ENSMUSG00000020277.11_77824593_77837905_1	chr10	-	1936	19	ISM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	7736	1812	7736	-1812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCAGCCTGTGTGATCG	NA	NA	NA	NA	NA	NA	NA	NA	77837905	77824592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843
ENSMUSG00000020277.11_77824698_77841348_1	chr10	-	2005	19	ISM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	4293	1917	4293	-1917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGGGTGGACTGGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	77841348	77824697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274
ENSMUSG00000020277.11_77825399_77845561_1	chr10	-	2034	19	ISM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	80	2618	80	-2618	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTCTGAGGGCGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	77845561	77825398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ENSMUSG00000020280.13_23616007_23681525_1	chr11	+	2208	18	FSM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	0	1351	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTTGTGTTGTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	23616006	23681525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ENSMUSG00000020280.13_23617313_23681891_1	chr11	+	2092	17	ISM	ENSMUSG00000020280.13	ENSMUST00000020520.11	1813	18	1616	-366	25	366	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTCATAGTCCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	23617312	23681891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ENSMUSG00000020280.13_23617362_23652950_1	chr11	+	485	5	ISM	ENSMUSG00000020280.13	ENST00000407787.5	1747	17	74	28567	74	-28567	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTCACCCCCTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	23617361	23652950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889
ENSMUSG00000020280.13_23622596_23682080_1	chr11	+	2091	16	ISM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	6589	796	5308	555	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTCGATAATGCTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	23622595	23682080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ENSMUSG00000020280.13_23622663_23682150_1	chr11	+	2094	16	ISM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	6656	726	5375	625	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTTCAAGTGGTCTATC	NA	NA	NA	NA	NA	NA	NA	NA	23622662	23682150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ENSMUSG00000020280.13_23623272_23662228_1	chr11	+	488	8	ISM	ENSMUSG00000020280.13	ENSMUST00000020520.11	1813	18	7575	19297	5984	-19289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAAACTCCTTGGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	23623271	23662228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199
ENSMUSG00000020280.13_23656883_23668652_1	chr11	+	521	7	ISM	ENSMUSG00000020280.13	ENSMUST00000020520.11	1813	18	41186	12873	39595	-12865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGCTGCACGGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	23656882	23668652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575
ENSMUSG00000020280.13_23657523_23668804_1	chr11	+	513	7	ISM	ENSMUSG00000020280.13	ENSMUST00000020520.11	1813	18	41826	12721	40235	-12713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGATGGATGTGCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	23657522	23668804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748
ENSMUSG00000020280.13_23661196_23670221_1	chr11	+	520	6	ISM	ENSMUSG00000020280.13	ENST00000407787.5	1747	17	43908	11296	43908	-11296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAACATGCAGTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	23661195	23670221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103
ENSMUSG00000020280.13_23661257_23675456_1	chr11	+	484	7	ISM	ENSMUSG00000020280.13	ENST00000407787.5	1747	17	43969	6061	43969	-6061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCGAGTCCTTCACCGA	NA	NA	NA	NA	NA	NA	NA	NA	23661256	23675456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431
ENSMUSG00000020280.13_23662239_23682752_1	chr11	+	2070	8	ISM	ENSMUSG00000020280.13	ENST00000407787.5	1747	17	44951	-1235	44951	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAATTGAAAAGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	23662238	23682752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ENSMUSG00000020280.13_23668745_23681398_1	chr11	+	499	5	ISM	ENSMUSG00000020280.13	ENST00000407787.5	1747	17	51457	119	51457	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACATACAGGCAGCATAT	NA	NA	NA	NA	NA	NA	NA	NA	23668744	23681398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ENSMUSG00000020282.19_32159804_32164304_1	chr11	-	1899	13	ISM	ENSMUSG00000020282.19	ENSMUST00000020524.15	2946	18	7996	219	131	3	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCGTGGACTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	32164304	32159803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181
ENSMUSG00000020282.19_32159804_32164416_1	chr11	-	1923	14	ISM	ENSMUSG00000020282.19	ENSMUST00000020524.15	2946	18	7884	219	19	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCGTGGACTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	32164416	32159803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181_32164305_32164392
ENSMUSG00000020282.19_32163404_32164579_1	chr11	-	582	4	ISM	ENSMUSG00000020282.19	ENST00000427504.1	1943	14	-144	3597	-144	-3597	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGCTGTGCCAGTGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	32164579	32163403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32163518_32163951_32164110_32164181_32164305_32164392
ENSMUSG00000020282.19_32163997_32165014_1	chr11	-	551	4	ISM	ENSMUSG00000020282.19	ENSMUST00000020524.15	2946	18	7286	4412	-579	-4190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCCCTGGACCGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	32165014	32163996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32164110_32164181_32164305_32164392_32164603_32164909
ENSMUSG00000020282.19_32164181_32165123_1	chr11	-	548	3	ISM	ENSMUSG00000020282.19	ENSMUST00000020524.15	2946	18	7177	4596	-688	-4374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGAGCCTGGGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	32165123	32164180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32164305_32164392_32164603_32164909
ENSMUSG00000020282.19_32164286_32166064_1	chr11	-	574	4	ISM	ENSMUSG00000020282.19	ENSMUST00000020524.15	2946	18	6236	4701	-1629	-4479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTTTACGAAGGGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	32166064	32164285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32164305_32164392_32164603_32164909_32165124_32165933
ENSMUSG00000020282.19_32164431_32166199_1	chr11	-	575	4	ISM	ENSMUSG00000020282.19	ENSMUST00000020524.15	2946	18	6101	4846	-1764	-4624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGATGAGCTTCCGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	32166199	32164430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32164603_32164909_32165124_32165933_32166065_32166141
ENSMUSG00000020282.19_32164491_32166253_1	chr11	-	569	4	ISM	ENSMUSG00000020282.19	ENSMUST00000020524.15	2946	18	6047	4906	-1818	-4684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGCTCCCGCTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	32166253	32164490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32164603_32164909_32165124_32165933_32166065_32166141
ENSMUSG00000020282.19_32164914_32172261_1	chr11	-	575	4	ISM	ENSMUSG00000020282.19	ENSMUST00000020524.15	2946	18	39	5329	39	-5107	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGTGTGCCGCCGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	32172261	32164913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32165124_32165933_32166065_32166141_32166283_32172168
ENSMUSG00000020283.6_23598573_23600979_1	chr11	-	1068	2	ISM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	14980	2094	14980	-2094	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTAAGGCAGGAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	23600979	23598572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_23599591_23600929
ENSMUSG00000020283.6_23598613_23601052_1	chr11	-	1101	2	ISM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	14907	2134	14907	-2134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGCGAGTCACAATATAT	NA	NA	NA	NA	NA	NA	NA	NA	23601052	23598612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_23599591_23600929
ENSMUSG00000020283.6_23598715_23601057_1	chr11	-	1004	2	ISM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	14902	2236	14902	-2236	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCACTGTGAAGAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	23601057	23598714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_23599591_23600929
ENSMUSG00000020283.6_23598870_23605648_1	chr11	-	1060	3	ISM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	10311	2391	10311	-2391	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAACCTTATAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	23605648	23598869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_23599591_23600929_23601056_23605435
ENSMUSG00000020283.6_23599134_23605906_1	chr11	-	1054	3	ISM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	10053	2655	10053	-2655	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGATCTGTCTACACT	NA	NA	NA	NA	NA	NA	NA	NA	23605906	23599133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_23599591_23600929_23601056_23605435
ENSMUSG00000020283.6_23599317_23606090_1	chr11	-	1055	3	ISM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	9869	2838	9869	-2838	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGGAGACAAACAAGATC	NA	NA	NA	NA	NA	NA	NA	NA	23606090	23599316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_23599591_23600929_23601056_23605435
ENSMUSG00000020283.6_23599456_23615842_1	chr11	-	1052	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	117	2977	117	-2977	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAACAACAGTCTTTTACC	NA	NA	NA	NA	NA	NA	NA	NA	23615842	23599455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
ENSMUSG00000020284.17_77814527_77821089_1	chr10	+	1465	6	NNC	ENSMUSG00000020284.17	novel	1818	7	NA	NA	20	-179	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAGAAGGGCCCTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	77814526	77821089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_77814630_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
ENSMUSG00000020284.17_77814527_77821089_2	chr10	+	1451	6	NIC	ENSMUSG00000020284.17	novel	1818	7	NA	NA	20	-179	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAGAAGGGCCCTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	77814526	77821089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_77814616_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
ENSMUSG00000020284.17_77814527_77821089_4	chr10	+	1470	7	FSM	ENSMUSG00000020284.17	ENSMUST00000105397.10	1818	7	169	179	20	-179	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAGAAGGGCCCTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	77814526	77821089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_77814616_77815586_77815606_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
ENSMUSG00000020284.17_77817415_77821270_1	chr10	+	1499	4	ISM	ENSMUSG00000020284.17	ENSMUST00000105397.10	1818	7	3057	-2	2908	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTCCCAGGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	77817414	77821270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77817648_77818703_77818876_77819349_77819426_77820252
ENSMUSG00000020284.17_77817596_77821270_1	chr10	+	1318	4	ISM	ENSMUSG00000020284.17	ENSMUST00000105397.10	1818	7	3238	-2	3089	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTCCCAGGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	77817595	77821270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_77817648_77818703_77818876_77819349_77819426_77820252
ENSMUSG00000020287.16_32176511_32182700_1	chr11	+	1731	4	NNC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGCACGCGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	32176510	32182700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_32176718_32177751_32177950_32179848_32180048_32181573
ENSMUSG00000020288.14_23439583_23440721_1	chr11	-	1041	2	ISM	ENSMUSG00000020288.14	ENST00000489653.6	1006	9	7133	-815	7133	815	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCGATCAGAGGCAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	23440721	23439582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_23440571_23440668
ENSMUSG00000020288.14_23439718_23441085_1	chr11	-	978	3	ISM	ENSMUSG00000020288.14	ENST00000489653.6	1006	9	6769	-680	6769	680	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCACAGGTATTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	23441085	23439717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_23440571_23440668_23440721_23441012
ENSMUSG00000020288.14_23439821_23441556_1	chr11	-	986	4	ISM	ENSMUSG00000020288.14	ENST00000489653.6	1006	9	6298	-577	6298	577	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGTAACAAAGGAAAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	23441556	23439820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474
ENSMUSG00000020288.14_23439951_23443319_1	chr11	-	1012	6	ISM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	4711	1404	4535	447	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGAGGGATGAGACATCT	NA	NA	NA	NA	NA	NA	NA	NA	23443319	23439950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278
ENSMUSG00000020288.14_23440068_23444992_1	chr11	-	983	7	ISM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	3038	1521	2862	330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTAAGCCAGTTTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	23444992	23440067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978
ENSMUSG00000020288.14_23440122_23445040_1	chr11	-	977	7	ISM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	2990	1575	2814	276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTACAATTGATTTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	23445040	23440121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978
ENSMUSG00000020288.14_23440427_23447839_1	chr11	-	962	9	FSM	ENSMUSG00000020288.14	ENST00000489653.6	1006	9	15	29	15	-29	multi-exon	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAGCTTACCGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	23447839	23440426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442207_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ENSMUSG00000020288.14_23440427_23447839_2	chr11	-	957	9	NIC	ENSMUSG00000020288.14	novel	1006	9	NA	NA	15	-29	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAGCTTACCGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	23447839	23440426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442207_23442307_23443278_23443394_23444978_23445065_23446690_23446877_23447774
ENSMUSG00000020288.14_23440427_23447839_3	chr11	-	952	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	191	1880	15	-29	multi-exon	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAGCTTACCGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	23447839	23440426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ENSMUSG00000020288.14_23440669_23448030_1	chr11	-	999	8	ISM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	0	2122	0	-271	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTCTATTCAGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	23448030	23440668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ENSMUSG00000020289.16_32182054_32184824_1	chr11	-	1349	3	ISM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	32883	91	32723	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACACAAATTCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	32184824	32182053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32183117_32183903_32184097_32184731
ENSMUSG00000020289.16_32182054_32184876_1	chr11	-	1401	3	ISM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	32831	91	32671	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACACAAATTCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	32184876	32182053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32183117_32183903_32184097_32184731
ENSMUSG00000020289.16_32182340_32187323_1	chr11	-	1314	5	ISM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	30384	377	30224	-377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACCTCTGGTTAAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	32187323	32182339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299
ENSMUSG00000020289.16_32182462_32189941_1	chr11	-	1420	6	ISM	ENSMUSG00000020289.16	ENSMUST00000109389.9	1642	12	27606	-489	27606	489	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGATGTGACTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	32189941	32182461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796
ENSMUSG00000020289.16_32182592_32191853_1	chr11	-	1358	7	ISM	ENSMUSG00000020289.16	ENSMUST00000109389.9	1642	12	25694	-359	25694	359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGTGTGGGGCTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	32191853	32182591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797
ENSMUSG00000020289.16_32182775_32198193_1	chr11	-	1306	8	ISM	ENSMUSG00000020289.16	ENSMUST00000109389.9	1642	12	19354	-176	19354	176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGACCTTGAACTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	32198193	32182774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144
ENSMUSG00000020289.16_32182951_32203936_1	chr11	-	1379	10	ISM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	13771	988	13611	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGGCAGCATGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	32203936	32182950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874
ENSMUSG00000020289.16_32183077_32205482_1	chr11	-	1310	11	ISM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	12225	1114	12065	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATGTACAATGAGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	32205482	32183076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438
ENSMUSG00000020289.16_32183990_32213071_1	chr11	-	1317	11	ISM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	4636	2027	4476	-1039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTAGCCTCTCAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	32213071	32183989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024
ENSMUSG00000020289.16_32184732_32217547_1	chr11	-	1358	11	ISM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	160	2769	0	-1781	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGATCCCCTTCCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	32217547	32184731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ENSMUSG00000020290.15_23207511_23246851_1	chr11	+	3862	24	NNC	ENSMUSG00000020290.15	novel	4107	24	NA	NA	48	-116	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAGGCTGCATCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	23207510	23246851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_23207538_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228329_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUSG00000020290.15_23211834_23246860_1	chr11	+	3841	23	ISM	ENSMUSG00000020290.15	ENST00000676999.1	4107	24	4371	192	2	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1396	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATCTTTTTAACAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	23211833	23246860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUSG00000020290.15_23211887_23246967_1	chr11	+	3895	23	ISM	ENSMUSG00000020290.15	ENST00000676999.1	4107	24	4424	85	55	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1880	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAGAACACTACTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	23211886	23246967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUSG00000020290.15_23217704_23245998_1	chr11	+	2842	22	ISM	ENSMUSG00000020290.15	ENST00000676789.1	4204	24	11205	969	5872	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGAGAAACAGCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	23217703	23245998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23245960
ENSMUSG00000020290.15_23228676_23246456_1	chr11	+	2878	17	ISM	ENSMUSG00000020290.15	ENST00000676789.1	4204	24	22177	511	16844	223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACAATACAAATTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	23228675	23246456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23245960
ENSMUSG00000020290.15_23228899_23246570_1	chr11	+	2850	16	ISM	ENSMUSG00000020290.15	ENST00000676789.1	4204	24	22400	397	17067	337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGCACCTCCTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	23228898	23246570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23245960
ENSMUSG00000020290.15_23230447_23246683_1	chr11	+	2863	15	ISM	ENSMUSG00000020290.15	ENST00000676789.1	4204	24	23948	284	18615	-284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGGGAACAGTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	23230446	23246683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23245960
ENSMUSG00000020290.15_23231394_23246818_1	chr11	+	2854	14	ISM	ENSMUSG00000020290.15	ENST00000676789.1	4204	24	24895	149	19562	-149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGTGAAATGGTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	23231393	23246818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23245960
ENSMUSG00000020290.15_23231450_23246866_1	chr11	+	2846	14	ISM	ENSMUSG00000020290.15	ENST00000676789.1	4204	24	24951	101	19618	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAACAACTCATTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	23231449	23246866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23245960
ENSMUSG00000020290.15_23232523_23246967_1	chr11	+	2938	13	ISM	ENSMUSG00000020290.15	ENST00000676789.1	4204	24	26024	0	20691	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	831	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAGAACACTACTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	23232522	23246967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23245960
ENSMUSG00000020290.15_23232638_23246048_1	chr11	+	2001	14	ISM	ENSMUSG00000020290.15	ENST00000678877.1	3894	21	20806	1004	20806	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCTGTACCTGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	23232637	23246048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUSG00000020290.15_23234861_23246518_1	chr11	+	2012	11	ISM	ENSMUSG00000020290.15	ENST00000678877.1	3894	21	23029	534	23029	285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGTAATGAGTAAAGCAATT	NA	NA	NA	NA	NA	NA	NA	NA	23234860	23246518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUSG00000020290.15_23235055_23247053_1	chr11	+	2440	10	ISM	ENSMUSG00000020290.15	ENST00000678877.1	3894	21	23223	-1	23223	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGATTTTAAGGATTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	23235054	23247053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUSG00000020290.15_23235077_23246098_1	chr11	+	281	2	ISM	ENSMUSG00000020290.15	ENST00000677850.1	3152	17	28578	902	23245	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGATTAAAATCTGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	23235076	23246098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_23235220_23245960
ENSMUSG00000020300.15_31823160_31839926_1	chr11	+	322	2	ISM	ENSMUSG00000020300.15	ENSMUST00000020543.13	2312	10	949	41651	934	-41651	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCCATTAAAGGTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	31823159	31839926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_31823413_31839857
ENSMUSG00000020300.15_31823275_31870527_1	chr11	+	339	3	ISM	ENSMUSG00000020300.15	ENST00000520867.5	2599	8	1373	11103	1049	-11050	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGATACTCTCGCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	31823274	31870527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_31823413_31839857_31839940_31870408
ENSMUSG00000020300.15_31839873_31881787_1	chr11	+	1276	8	NNC	ENSMUSG00000020300.15	novel	1405	8	NA	NA	12	-112	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGAGGATCTAAACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	31839872	31881787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_31839940_31858824_31858876_31870413_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
ENSMUSG00000020300.15_31839891_31881815_1	chr11	+	1291	8	FSM	ENSMUSG00000020300.15	ENST00000522336.5	1405	8	30	84	30	-84	multi-exon	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTAGAGGAGAGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	31839890	31881815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_31839940_31858824_31858876_31870408_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
ENSMUSG00000020300.15_31839898_31881808_1	chr11	+	1272	8	NNC	ENSMUSG00000020300.15	novel	1405	8	NA	NA	37	-91	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCATTTTCTTAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	31839897	31881808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_31839940_31858824_31858876_31870408_31870583_31874630_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
ENSMUSG00000020300.15_31858823_31881838_1	chr11	+	1261	7	NNC	ENSMUSG00000020300.15	novel	1405	8	NA	NA	18962	-61	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAGAAATGAGACAATAT	NA	NA	NA	NA	NA	NA	NA	NA	31858822	31881838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_31858876_31870408_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881310
ENSMUSG00000020300.15_31858823_31881901_1	chr11	+	1325	7	NNC	ENSMUSG00000020300.15	novel	1405	8	NA	NA	18962	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATTGAGATAATCACCA	NA	NA	NA	NA	NA	NA	NA	NA	31858822	31881901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_31858876_31870408_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880042_31880220_31881304
ENSMUSG00000020300.15_31870408_31881901_1	chr11	+	1272	6	NNC	ENSMUSG00000020300.15	novel	1405	8	NA	NA	30547	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATTGAGATAATCACCA	NA	NA	NA	NA	NA	NA	NA	NA	31870407	31881901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_31870583_31874625_31874716_31875348_31875468_31877646_31877756_31880037_31880220_31881304
ENSMUSG00000020305.14_30904419_31051052_1	chr11	+	1552	10	FSM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	24	1652	0	-281	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCATCTTTGTCGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	30904418	31051052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
ENSMUSG00000020305.14_30904448_31051105_1	chr11	+	1576	10	FSM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	53	1599	29	-228	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGACATTTTCATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	30904447	31051105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
ENSMUSG00000020305.14_30904448_31051172_1	chr11	+	1643	10	FSM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	53	1532	29	-161	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTTTAAGAATGAATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	30904447	31051172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
ENSMUSG00000020305.14_30948428_31051333_1	chr11	+	1567	9	ISM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	44033	1371	44009	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTTGTGTCTTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	30948427	31051333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
ENSMUSG00000020305.14_31005460_31051502_1	chr11	+	1481	7	ISM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	101065	1202	101041	169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCATGTTCACCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	31005459	31051502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
ENSMUSG00000020305.14_31005492_31051587_1	chr11	+	1534	7	ISM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	101097	1117	101073	254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCATTATTATTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	31005491	31051587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
ENSMUSG00000020305.14_31005554_31051648_1	chr11	+	1533	7	ISM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	101159	1056	101135	315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCATGTTATAATCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	31005553	31051648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
ENSMUSG00000020305.14_31008861_31051878_1	chr11	+	1571	5	ISM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	104466	826	104442	545	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCATACACAGCATAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	31008860	31051878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
ENSMUSG00000020305.14_31008920_31051927_1	chr11	+	1561	5	ISM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	104525	777	104501	594	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACTTAGAATATTAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	31008919	31051927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
ENSMUSG00000020305.14_31031393_31052212_1	chr11	+	1537	3	ISM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	126998	492	126974	-492	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGTCAAGAAAAATCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	31031392	31052212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_31031623_31035000_31035132_31051036
ENSMUSG00000020305.14_31031471_31052295_1	chr11	+	1542	3	ISM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	127076	409	127052	-409	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATAGACAGAACAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	31031470	31052295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_31031623_31035000_31035132_31051036
ENSMUSG00000020305.14_31031499_31052391_1	chr11	+	1610	3	ISM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	127104	313	127080	-313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCCTTGAAAGAAGCATAA	NA	NA	NA	NA	NA	NA	NA	NA	31031498	31052391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_31031623_31035000_31035132_31051036
ENSMUSG00000020305.14_31035038_31052496_1	chr11	+	1554	2	ISM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	130643	208	130619	-208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGGCAGAAATTCTGATA	NA	NA	NA	NA	NA	NA	NA	NA	31035037	31052496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_31035132_31051036
ENSMUSG00000020305.14_31035096_31052540_1	chr11	+	1540	2	ISM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	130701	164	130677	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTTAAAATTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	31035095	31052540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_31035132_31051036
ENSMUSG00000020309.7_30927427_30936334_1	chr11	-	579	3	FSM	ENSMUSG00000020309.7	ENSMUST00000101394.5	1315	3	16	720	0	-475	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTCTTTGGAAAAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	30936334	30927426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_30927747_30929564_30929601_30936111
ENSMUSG00000020311.18_30880774_30901369_1	chr11	-	2170	12	ISM	ENSMUSG00000020311.18	ENSMUST00000073192.14	2532	14	2783	0	2780	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTTCATGCTTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	30901369	30880773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306
ENSMUSG00000020311.18_30880978_30903989_1	chr11	-	2165	14	FSM	ENSMUSG00000020311.18	ENSMUST00000073192.14	2532	14	163	204	160	-33	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAAGCAGTCTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	30903989	30880977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
ENSMUSG00000020311.18_30881124_30904152_1	chr11	-	2182	14	FSM	ENSMUSG00000020311.18	ENSMUST00000073192.14	2532	14	0	350	0	-179	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGACAGTTCGTGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	30904152	30881123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
ENSMUSG00000020319.10_21522235_21807540_1	chr11	+	2076	15	ISM	ENSMUSG00000020319.10	ENSMUST00000020568.10	2792	18	0	41449	0	-41449	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTTCCATTGGTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	21522234	21807540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21522371_21602225_21602311_21609994_21610043_21610888_21610940_21613996_21614068_21614325_21614386_21639567_21639683_21641769_21641904_21645113_21645306_21661461_21662072_21671102_21671292_21674512_21674637_21698877_21698942_21763359_21763463_21807446
ENSMUSG00000020319.10_21602268_21661580_1	chr11	+	827	9	ISM	ENSMUSG00000020319.10	ENST00000409562.7	1679	11	46	13058	46	-13058	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGTATTTATGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	21602267	21661580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21602311_21609994_21610043_21610894_21610940_21613996_21614068_21614325_21614386_21639567_21639683_21641769_21641904_21645113_21645306_21661461
ENSMUSG00000020319.10_21639583_21661910_1	chr11	+	875	4	ISM	ENSMUSG00000020319.10	ENST00000409562.7	1679	11	37361	12728	37361	-12728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAATTCAAGAAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	21639582	21661910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21639683_21641769_21641904_21645113_21645306_21661461
ENSMUSG00000020319.10_21641769_21662071_1	chr11	+	937	3	ISM	ENSMUSG00000020319.10	ENST00000409562.7	1679	11	39547	12567	39547	-12567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCAAGTAGCCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	21641768	21662071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21641904_21645113_21645306_21661461
ENSMUSG00000020319.10_21641797_21848836_1	chr11	+	2046	11	ISM	ENSMUSG00000020319.10	ENSMUST00000020568.10	2792	18	119562	153	39575	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTCAATTCCCACCACC	NA	NA	NA	NA	NA	NA	NA	NA	21641796	21848836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21641904_21645113_21645306_21661461_21662072_21671102_21671292_21674512_21674637_21698877_21698942_21763359_21763463_21807446_21807610_21834983_21835088_21836259_21836289_21848475
ENSMUSG00000020319.10_21641861_21848873_1	chr11	+	2019	11	ISM	ENSMUSG00000020319.10	ENSMUST00000020568.10	2792	18	119626	116	39639	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTTAATTCCAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	21641860	21848873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21641904_21645113_21645306_21661461_21662072_21671102_21671292_21674512_21674637_21698877_21698942_21763359_21763463_21807446_21807610_21834983_21835088_21836259_21836289_21848475
ENSMUSG00000020319.10_21645129_21671178_1	chr11	+	863	3	ISM	ENSMUSG00000020319.10	ENST00000409562.7	1679	11	42907	3460	42907	-3460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGCATCCTGCGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	21645128	21671178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21645306_21661461_21662072_21671102
ENSMUSG00000020319.10_21645129_21671218_1	chr11	+	903	3	ISM	ENSMUSG00000020319.10	ENST00000409562.7	1679	11	42907	3420	42907	-3420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTTTGATCGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	21645128	21671218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21645306_21661461_21662072_21671102
ENSMUSG00000020319.10_21645129_21848989_1	chr11	+	2077	10	ISM	ENSMUSG00000020319.10	ENSMUST00000020568.10	2792	18	122894	0	42907	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTTCTTCTCCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	21645128	21848989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21645306_21661461_21662072_21671102_21671292_21674512_21674637_21698877_21698942_21763359_21763463_21807446_21807610_21834983_21835088_21836259_21836289_21848475
ENSMUSG00000020319.10_21661460_21674636_1	chr11	+	925	3	ISM	ENSMUSG00000020319.10	ENST00000409562.7	1679	11	59238	2	59238	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGACGCCTCTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	21661459	21674636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_21662072_21671102_21671292_21674512
ENSMUSG00000020321.17_21506948_21508553_1	chr11	-	713	2	ISM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	13381	256	13268	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATATTTGATAGCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	21508553	21506947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21507569_21508461
ENSMUSG00000020321.17_21507343_21509794_1	chr11	-	520	4	NNC	ENSMUSG00000020321.17	novel	699	5	NA	NA	12027	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAACAGCAAAATATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	21509794	21507342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_21507563_21508461_21508552_21509191_21509306_21509698
ENSMUSG00000020321.17_21507343_21512987_1	chr11	-	730	5	ISM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	8947	651	8834	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAACAGCAAAATATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	21512987	21507342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864
ENSMUSG00000020321.17_21507496_21515920_1	chr11	-	850	7	ISM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	6014	804	5901	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGCTGACCGAGGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	21515920	21507495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823
ENSMUSG00000020321.17_21507496_21521789_1	chr11	-	514	5	FSM	ENSMUSG00000020321.17	ENST00000409908.5	699	5	32	153	32	-153	multi-exon	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGCTGACCGAGGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	21521789	21507495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21521729
ENSMUSG00000020321.17_21508490_21516718_1	chr11	-	848	7	ISM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	5216	1798	5103	-1147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTACTCATTCCCTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	21516718	21508489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619
ENSMUSG00000020321.17_21509191_21521789_1	chr11	-	847	7	ISM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	145	2499	32	-1848	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGTTCTCATTTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	21521789	21509190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ENSMUSG00000020321.17_21509699_21521934_1	chr11	-	877	6	ISM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	0	3007	0	-2356	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAGGATGTGAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	21521934	21509698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ENSMUSG00000020321.17_21515824_21522193_1	chr11	-	660	3	ISM	ENSMUSG00000020321.17	ENSMUST00000102874.11	2122	9	0	9037	0	-8481	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTTGGGAAGTCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	21522193	21515823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21515921_21516619_21516719_21521729
ENSMUSG00000020325.11_79613126_79617128_1	chr10	+	679	4	ISM	ENSMUSG00000020325.11	ENSMUST00000020575.5	1955	5	20	1336	20	-1336	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCACTTGCTTCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	79613125	79617128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79613232_79614396_79614583_79615798_79616015_79616957
ENSMUSG00000020325.11_79614403_79617308_1	chr10	+	667	4	ISM	ENSMUSG00000020325.11	ENSMUST00000020575.5	1955	5	1297	1156	1297	-1156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCAGCCACTGGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	79614402	79617308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79614583_79615798_79616015_79616957_79617186_79617265
ENSMUSG00000020325.11_79614473_79617342_1	chr10	+	631	4	ISM	ENSMUSG00000020325.11	ENSMUST00000020575.5	1955	5	1367	1122	1367	-1122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGATTTTATTTATTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	79614472	79617342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79614583_79615798_79616015_79616957_79617186_79617265
ENSMUSG00000020325.11_79614516_79617403_1	chr10	+	649	4	ISM	ENSMUSG00000020325.11	ENSMUST00000020575.5	1955	5	1410	1061	1410	-1061	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCCTGGAACCACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	79614515	79617403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79614583_79615798_79616015_79616957_79617186_79617265
ENSMUSG00000020325.11_79615856_79617511_1	chr10	+	633	3	ISM	ENSMUSG00000020325.11	ENSMUST00000020575.5	1955	5	2750	953	2750	-953	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAAAGTTAGAACCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	79615855	79617511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79616015_79616957_79617186_79617265
ENSMUSG00000020325.11_79615910_79617566_1	chr10	+	634	3	ISM	ENSMUSG00000020325.11	ENSMUST00000020575.5	1955	5	2804	898	2804	-898	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGCTATGATCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	79615909	79617566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79616015_79616957_79617186_79617265
ENSMUSG00000020325.11_79616987_79617719_1	chr10	+	653	2	ISM	ENSMUSG00000020325.11	ENSMUST00000020575.5	1955	5	3881	745	3881	-745	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAACCTGGTAGAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	79616986	79617719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79617186_79617265
ENSMUSG00000020325.11_79617116_79617834_1	chr10	+	639	2	ISM	ENSMUSG00000020325.11	ENSMUST00000020575.5	1955	5	4010	630	4010	-630	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCTGCACACCCACATT	NA	NA	NA	NA	NA	NA	NA	NA	79617115	79617834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79617186_79617265
ENSMUSG00000020326.8_40639379_40644765_1	chr11	-	1984	6	FSM	ENSMUSG00000020326.8	ENST00000393929.5	2112	6	132	-4	132	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	40644765	40639378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_40640613_40641699_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634
ENSMUSG00000020326.8_40639379_40644890_1	chr11	-	2104	6	NNC	ENSMUSG00000020326.8	novel	2112	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	40644890	40639378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_40640613_40641699_40641882_40642087_40642187_40642266_40642346_40642930_40643185_40644634
ENSMUSG00000020326.8_40639379_40644890_2	chr11	-	2103	6	NNC	ENSMUSG00000020326.8	novel	2112	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	40644890	40639378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_40640613_40641699_40641887_40642087_40642187_40642266_40642346_40642930_40643179_40644634
ENSMUSG00000020326.8_40639379_40644890_3	chr11	-	2109	6	FSM	ENSMUSG00000020326.8	ENST00000393929.5	2112	6	7	-4	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	40644890	40639378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_40640613_40641699_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634
ENSMUSG00000020326.8_40642307_40645870_1	chr11	-	336	3	ISM	ENSMUSG00000020326.8	ENST00000512163.5	749	5	95	599	95	-599	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCCTGCCACTGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	40645870	40642306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40642346_40642930_40643185_40645827
ENSMUSG00000020328.11_40624571_40630310_1	chr11	+	937	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	77	563	77	-67	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATATTTAATTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	40624570	40630310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
ENSMUSG00000020328.11_40624571_40630388_1	chr11	+	1015	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	77	485	77	11	multi-exon	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTTTTTTTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	40624570	40630388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
ENSMUSG00000020328.11_40626843_40630768_1	chr11	+	986	3	ISM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	2349	105	2070	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAAAAAAAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	40626842	40630768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_40626894_40627319_40627472_40629985
ENSMUSG00000020328.11_40627319_40630873_1	chr11	+	1041	2	ISM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	2825	0	2546	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	40627318	40630873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_40627472_40629985
ENSMUSG00000020329.13_79573097_79575769_1	chr10	-	1568	7	ISM	ENSMUSG00000020329.13	ENST00000578759.1	2746	14	3398	0	3398	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCCCAGGACGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	79575769	79573096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79573245_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976
ENSMUSG00000020329.13_79573097_79575769_2	chr10	-	1566	7	NNC	ENSMUSG00000020329.13	novel	2746	14	NA	NA	3398	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCCCAGGACGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	79575769	79573096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_79573245_79573433_79573548_79573633_79573721_79573864_79574039_79574157_79574285_79574515_79574639_79574976
ENSMUSG00000020329.13_79573097_79576583_1	chr10	-	1962	10	ISM	ENSMUSG00000020329.13	ENSMUST00000020580.13	3755	21	5830	1133	2584	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCCCAGGACGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	79576583	79573096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412
ENSMUSG00000020329.13_79573223_79576036_1	chr10	-	1497	8	ISM	ENSMUSG00000020329.13	ENST00000578759.1	2746	14	3131	126	3131	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGCCTACAATTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	79576036	79573222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79573245_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977
ENSMUSG00000020329.13_79573483_79576775_1	chr10	-	1869	9	ISM	ENSMUSG00000020329.13	ENST00000578759.1	2746	14	2392	386	2392	-386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGGCATCCCCATCATAC	NA	NA	NA	NA	NA	NA	NA	NA	79576775	79573482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666
ENSMUSG00000020329.13_79574218_79576790_1	chr10	-	1496	6	ISM	ENSMUSG00000020329.13	ENST00000578759.1	2746	14	2377	1121	2377	-1121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCTAACGCCGTCCGAC	NA	NA	NA	NA	NA	NA	NA	NA	79576790	79574217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666
ENSMUSG00000020329.13_79574578_79577040_1	chr10	-	1488	6	ISM	ENSMUSG00000020329.13	ENST00000578759.1	2746	14	2127	1481	2127	-1481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCACACGCAGTCCGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	79577040	79574577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960
ENSMUSG00000020329.13_79575194_79577858_1	chr10	-	1504	7	ISM	ENSMUSG00000020329.13	ENST00000578759.1	2746	14	1309	2097	1309	-2097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCGCCACACTTCAACC	NA	NA	NA	NA	NA	NA	NA	NA	79577858	79575193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821
ENSMUSG00000020329.13_79575306_79579043_1	chr10	-	1518	8	ISM	ENSMUSG00000020329.13	ENST00000578759.1	2746	14	124	2209	124	-2209	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCACAGTCTGCGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	79579043	79575305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011
ENSMUSG00000020329.13_79575378_79579077_1	chr10	-	1480	8	ISM	ENSMUSG00000020329.13	ENST00000578759.1	2746	14	90	2281	90	-2281	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCGGCTCCACACCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	79579077	79575377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011
ENSMUSG00000020329.13_79575425_79579135_1	chr10	-	1491	8	ISM	ENSMUSG00000020329.13	ENST00000578759.1	2746	14	32	2328	32	-2328	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCCCCGCGCTCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	79579135	79575424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011
ENSMUSG00000020330.17_40592222_40594763_1	chr11	-	1619	2	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	29486	0	29430	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCCAATCAGTGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	40594763	40592221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40593686_40594608
ENSMUSG00000020330.17_40592337_40596750_1	chr11	-	1535	3	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	27499	115	27443	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAGGCTCTCAAGCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	40596750	40592336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40593686_40594608_40594763_40596718
ENSMUSG00000020330.17_40592385_40596822_1	chr11	-	1559	3	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	27427	163	27371	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCTTATGTCTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	40596822	40592384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40593686_40594608_40594763_40596718
ENSMUSG00000020330.17_40592569_40598438_1	chr11	-	1595	5	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	25811	347	25755	-347	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATGGCCTCTCACATGC	NA	NA	NA	NA	NA	NA	NA	NA	40598438	40592568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391
ENSMUSG00000020330.17_40592831_40598938_1	chr11	-	1536	6	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	25311	609	25255	-609	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTCACTTCTCTAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	40598938	40592830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841
ENSMUSG00000020330.17_40593071_40600932_1	chr11	-	1544	7	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	23317	849	23261	450	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCATGATCAAAATAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	40600932	40593070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734
ENSMUSG00000020330.17_40593147_40601011_1	chr11	-	1547	7	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	23238	925	23182	374	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAACTCCAGGTGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	40601011	40593146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734
ENSMUSG00000020330.17_40593207_40601058_1	chr11	-	1534	7	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	23191	985	23135	314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCCTTACAGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	40601058	40593206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734
ENSMUSG00000020330.17_40593604_40605686_1	chr11	-	1546	9	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	18563	1382	18507	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATTGTTCTTGATATT	NA	NA	NA	NA	NA	NA	NA	NA	40605686	40593603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537
ENSMUSG00000020330.17_40593604_40606245_1	chr11	-	1465	10	NNC	ENSMUSG00000020330.17	novel	1971	15	NA	NA	17948	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATTGTTCTTGATATT	NA	NA	NA	NA	NA	NA	NA	NA	40606245	40593603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598269_40598391_40598545_40598841_40598989_40600985_40601104_40604804_40605020_40605537_40605687_40606067
ENSMUSG00000020330.17_40593604_40612507_1	chr11	-	1578	12	NNC	ENSMUSG00000020330.17	novel	1971	15	NA	NA	11686	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1285	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATTGTTCTTGATATT	NA	NA	NA	NA	NA	NA	NA	NA	40612507	40593603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598267_40598391_40598545_40598841_40598989_40600985_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465
ENSMUSG00000020330.17_40593604_40612507_2	chr11	-	1583	12	ISM	ENSMUSG00000020330.17	ENST00000432118.6	1971	15	11686	0	11686	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATTGTTCTTGATATT	NA	NA	NA	NA	NA	NA	NA	NA	40612507	40593603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598272_40598391_40598545_40598841_40598989_40600985_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465
ENSMUSG00000020330.17_40593604_40612745_1	chr11	-	1731	13	ISM	ENSMUSG00000020330.17	ENST00000432118.6	1971	15	11448	0	11448	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATTGTTCTTGATATT	NA	NA	NA	NA	NA	NA	NA	NA	40612745	40593603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598272_40598391_40598545_40598841_40598989_40600985_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656
ENSMUSG00000020330.17_40594685_40606243_1	chr11	-	1564	9	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	18006	2463	17950	-1081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGCATCAGACACTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	40606243	40594684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067
ENSMUSG00000020330.17_40594685_40614278_1	chr11	-	1625	13	ISM	ENSMUSG00000020330.17	ENST00000432118.6	1971	15	9915	1081	9915	-1081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGCATCAGACACTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	40614278	40594684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40594763_40596718_40596896_40598176_40598272_40598391_40598545_40598841_40598989_40600985_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224
ENSMUSG00000020330.17_40596834_40624218_1	chr11	-	1645	13	ISM	ENSMUSG00000020330.17	ENST00000432118.6	1971	15	-25	3230	-25	-3230	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGCAGCTAAATAAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	40624218	40596833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40596896_40598176_40598272_40598391_40598545_40598841_40598989_40600985_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40624140
ENSMUSG00000020330.17_40598177_40612743_1	chr11	-	1572	10	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	11506	5955	11450	-4573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGCTTGTTATTAAG	NA	NA	NA	NA	NA	NA	NA	NA	40612743	40598176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656
ENSMUSG00000020330.17_40598392_40614339_1	chr11	-	1587	10	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	9910	6170	9854	-4788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCAGGCTAGACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	40614339	40598391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224
ENSMUSG00000020330.17_40598468_40619308_1	chr11	-	1437	12	ISM	ENSMUSG00000020330.17	ENST00000393915.9	2281	18	4885	4947	4885	-4864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAACTGATTTGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	40619308	40598467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40598545_40598841_40598989_40600985_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253
ENSMUSG00000020330.17_40598941_40624218_1	chr11	-	1463	13	ISM	ENSMUSG00000020330.17	ENST00000393915.9	2281	18	-25	5420	-25	-5337	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGACTCTACAAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	40624218	40598940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40598989_40600985_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ENSMUSG00000020330.17_40600757_40620012_1	chr11	-	1531	11	ISM	ENSMUSG00000020330.17	ENST00000393915.9	2281	18	4181	7236	4181	-7153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTCACTGCTCAGTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	40620012	40600756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948
ENSMUSG00000020333.18_54205814_54215933_1	chr11	+	558	5	ISM	ENSMUSG00000020333.18	ENST00000651427.1	2589	21	48	36396	0	-12621	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGACTGTAAAGTGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	54205813	54215933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_54206034_54210977_54211094_54214066_54214182_54214815_54214881_54215891
ENSMUSG00000020333.18_54205967_54216486_1	chr11	+	565	6	ISM	ENSMUSG00000020333.18	ENST00000651427.1	2589	21	201	35843	153	-12068	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCCCAGCTCCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	54205966	54216486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_54206034_54210977_54211094_54214066_54214182_54214815_54214881_54215891_54215994_54216386
ENSMUSG00000020333.18_54225875_54231392_1	chr11	+	495	5	ISM	ENSMUSG00000020333.18	ENST00000651427.1	2589	21	20109	20937	15193	1279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTACGAGCAGCTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	54225874	54231392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_54225952_54227896_54227975_54229237_54229373_54229825_54229961_54231322
ENSMUSG00000020334.7_53873949_53918790_1	chr11	-	1980	11	NNC	ENSMUSG00000020334.7	novel	1986	11	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTAACAATGCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	53918790	53873948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_53874250_53874397_53874512_53877303_53877440_53879607_53879791_53881449_53881665_53882813_53882906_53886789_53886917_53888202_53888375_53896219_53896375_53898593_53898698_53918409
ENSMUSG00000020334.7_53873949_53918790_2	chr11	-	1983	11	FSM	ENSMUSG00000020334.7	ENST00000200652.4	1986	11	18	-15	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTAACAATGCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	53918790	53873948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_53874250_53874397_53874512_53877303_53877440_53879607_53879791_53881449_53881665_53882810_53882906_53886789_53886917_53888202_53888375_53896219_53896375_53898593_53898698_53918409
ENSMUSG00000020334.7_53873949_53918790_3	chr11	-	1977	11	NNC	ENSMUSG00000020334.7	novel	1986	11	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTAACAATGCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	53918790	53873948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_53874250_53874397_53874506_53877303_53877440_53879607_53879791_53881449_53881665_53882810_53882906_53886789_53886917_53888202_53888375_53896219_53896375_53898593_53898698_53918409
ENSMUSG00000020334.7_53873949_53918790_4	chr11	-	1975	11	NNC	ENSMUSG00000020334.7	novel	1986	11	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTAACAATGCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	53918790	53873948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_53874250_53874397_53874512_53877311_53877440_53879607_53879791_53881449_53881665_53882810_53882906_53886789_53886917_53888202_53888375_53896219_53896375_53898593_53898698_53918409
ENSMUSG00000020340.17_46098240_46151708_1	chr11	-	1667	15	ISM	ENSMUSG00000020340.17	ENST00000616178.4	4213	32	51471	11340	51413	-11340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAGAGCGGCTGGGGACG	NA	NA	NA	NA	NA	NA	NA	NA	46151708	46098239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46149502_46149578_46151626
ENSMUSG00000020340.17_46112183_46152396_1	chr11	-	1704	14	ISM	ENSMUSG00000020340.17	ENST00000616178.4	4213	32	50783	25283	50725	-25283	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCATAGAGCAAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	46152396	46112182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46149502_46149578_46151626_46151775_46152263
ENSMUSG00000020340.17_46113472_46156805_1	chr11	-	1667	14	ISM	ENSMUSG00000020340.17	ENST00000616178.4	4213	32	46374	26572	46316	-26572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGTTTGCCTCGGCACG	NA	NA	NA	NA	NA	NA	NA	NA	46156805	46113471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46149502_46149578_46151626_46151775_46152263_46152431_46156730
ENSMUSG00000020340.17_46114967_46157619_1	chr11	-	1667	14	ISM	ENSMUSG00000020340.17	ENST00000616178.4	4213	32	45560	28067	45502	-28067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCATCTGCAGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	46157619	46114966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46149502_46149578_46151626_46151775_46152263_46152431_46156730_46156857_46157536
ENSMUSG00000020340.17_46130842_46161496_1	chr11	-	1745	14	ISM	ENSMUSG00000020340.17	ENST00000616178.4	4213	32	41683	43942	41625	-43942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGATCCAAGGTAAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	46161496	46130841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46149502_46149578_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378
ENSMUSG00000020340.17_46133189_46163498_1	chr11	-	1656	14	ISM	ENSMUSG00000020340.17	ENST00000616178.4	4213	32	39681	46289	39623	-46289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCACCCTGCATGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	46163498	46133188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46149502_46149578_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435
ENSMUSG00000020340.17_46138448_46167671_1	chr11	-	1669	15	ISM	ENSMUSG00000020340.17	ENST00000616178.4	4213	32	35508	51548	35450	-51548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAAGTCCTTGGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	46167671	46138447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46149502_46149578_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605
ENSMUSG00000020340.17_46140595_46168931_1	chr11	-	1682	15	ISM	ENSMUSG00000020340.17	ENST00000616178.4	4213	32	34248	53695	34190	-53695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGCTACGAGACACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	46168931	46140594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46149502_46149578_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885
ENSMUSG00000020340.17_46145416_46175061_1	chr11	-	1669	14	ISM	ENSMUSG00000020340.17	ENST00000616178.4	4213	32	28118	58516	28060	-58516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTCCCGATTGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	46175061	46145415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_46145494_46148375_46148530_46149502_46149578_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983
ENSMUSG00000020340.17_46148469_46180533_1	chr11	-	1675	15	ISM	ENSMUSG00000020340.17	ENST00000616178.4	4213	32	22646	61569	22588	-61569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTCAGAAGCAGCCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	46180533	46148468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_46148530_46149502_46149578_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458
ENSMUSG00000020340.17_46151660_46182474_1	chr11	-	1656	14	ISM	ENSMUSG00000020340.17	ENST00000616178.4	4213	32	20705	64760	20647	-64760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGCCGTGCTGTGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	46182474	46151659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458_46180549_46182339
ENSMUSG00000020346.17_49135073_49152552_1	chr11	+	1799	4	FSM	ENSMUSG00000020346.17	ENSMUST00000167400.8	3151	4	55	1297	0	-1270	multi-exon	TRUE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACCTGTCGTACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	49135072	49152552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_49135167_49136019_49136445_49142376_49142502_49151397
ENSMUSG00000020346.17_49135073_49152970_1	chr11	+	2092	3	FSM	ENSMUSG00000020346.17	ENSMUST00000081794.7	2976	3	0	884	0	-852	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGATCTGTAGATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	49135072	49152970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_49135167_49136019_49136445_49151397
ENSMUSG00000020346.17_49136256_49152839_1	chr11	+	1756	3	ISM	ENSMUSG00000020346.17	ENSMUST00000167400.8	3151	4	1238	1010	1183	-983	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGATCCTAGCTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	49136255	49152839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49136445_49142376_49142502_49151397
ENSMUSG00000020346.17_49136308_49152936_1	chr11	+	1801	3	ISM	ENSMUSG00000020346.17	ENSMUST00000167400.8	3151	4	1290	913	1235	-886	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTGCCAGTGTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	49136307	49152936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49136445_49142376_49142502_49151397
ENSMUSG00000020346.17_49141417_49152118_1	chr11	+	912	3	FSM	ENSMUSG00000020346.17	ENSMUST00000101293.11	2729	3	78	1739	78	-1704	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCAAGTTCCCGGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	49141416	49152118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_49141483_49142376_49142502_49151397
ENSMUSG00000020354.16_46869006_46973663_1	chr11	-	1346	4	ISM	ENSMUSG00000020354.16	ENST00000435422.7	3173	9	296874	856	296686	606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGATAAAAATCTAACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	46973663	46869005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_46869533_46869626_46870264_46871637_46871762_46973605
ENSMUSG00000020354.16_46869163_47023512_1	chr11	-	1412	6	ISM	ENSMUSG00000020354.16	ENST00000435422.7	3173	9	247025	1013	246837	449	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGATGAGCGAAACATC	NA	NA	NA	NA	NA	NA	NA	NA	47023512	46869162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_46869533_46869626_46870264_46871637_46871762_46973605_46973679_47016361_47016482_47023424
ENSMUSG00000020354.16_46869391_47246090_1	chr11	-	1365	8	ISM	ENSMUSG00000020354.16	ENST00000435422.7	3173	9	24447	1241	24259	221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACATTCTAGGAGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	47246090	46869390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_46869533_46869626_46870264_46871637_46871762_46973605_46973679_47016361_47016482_47023424_47023513_47085857_47085960_47246011
ENSMUSG00000020354.16_46869464_47246147_1	chr11	-	1349	8	ISM	ENSMUSG00000020354.16	ENST00000435422.7	3173	9	24390	1314	24202	148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCGACATAAGGATGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	47246147	46869463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_46869533_46869626_46870264_46871637_46871762_46973605_46973679_47016361_47016482_47023424_47023513_47085857_47085960_47246011
ENSMUSG00000020354.16_46869747_47270231_1	chr11	-	1364	8	FSM	ENSMUSG00000020354.16	ENSMUST00000077221.6	1617	8	118	135	118	-135	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCATACAGTGGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	47270231	46869746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_46870264_46871637_46871762_46973605_46973679_47016361_47016482_47023424_47023513_47085857_47085960_47246011_47246201_47270080
ENSMUSG00000020354.16_46869804_47270349_1	chr11	-	1425	8	FSM	ENSMUSG00000020354.16	ENSMUST00000077221.6	1617	8	0	192	0	-192	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCCACATGACAGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	47270349	46869803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_46870264_46871637_46871762_46973605_46973679_47016361_47016482_47023424_47023513_47085857_47085960_47246011_47246201_47270080
ENSMUSG00000020354.16_46869963_47270439_1	chr11	-	1356	8	FSM	ENSMUSG00000020354.16	ENSMUST00000077221.6	1617	8	-90	351	-90	-351	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTATGAGTGGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	47270439	46869962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_46870264_46871637_46871762_46973605_46973679_47016361_47016482_47023424_47023513_47085857_47085960_47246011_47246201_47270080
ENSMUSG00000020357.4_49516208_49526065_1	chr11	+	2055	14	ISM	ENSMUSG00000020357.4	ENST00000502649.5	3742	27	161	12794	161	-12794	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTCCTCCTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	49516207	49526065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49516299_49516524_49516638_49516727_49516891_49517082_49517223_49517495_49517665_49517946_49518065_49521095_49521251_49521339_49521503_49522805_49522933_49523969_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000
ENSMUSG00000020357.4_49516592_49526476_1	chr11	+	1987	14	ISM	ENSMUSG00000020357.4	ENST00000502649.5	3742	27	545	12383	545	-12383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGGGAGGTGCCTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	49516591	49526476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49516638_49516727_49516891_49517082_49517223_49517495_49517665_49517946_49518065_49521095_49521251_49521339_49521503_49522805_49522933_49523969_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428
ENSMUSG00000020357.4_49516822_49527108_1	chr11	+	1991	14	ISM	ENSMUSG00000020357.4	ENST00000502649.5	3742	27	775	11751	775	-11751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAATAAAGGCAGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	49516821	49527108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49516891_49517082_49517223_49517495_49517665_49517946_49518065_49521095_49521251_49521339_49521503_49522805_49522933_49523969_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052
ENSMUSG00000020357.4_49517080_49527599_1	chr11	+	2088	14	ISM	ENSMUSG00000020357.4	ENST00000502649.5	3742	27	1033	11260	1033	-11260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1036	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGAAATGAGATGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	49517079	49527599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49517223_49517495_49517665_49517946_49518065_49521095_49521251_49521339_49521503_49522805_49522933_49523969_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485
ENSMUSG00000020357.4_49517510_49528045_1	chr11	+	2037	15	ISM	ENSMUSG00000020357.4	ENST00000502649.5	3742	27	1463	10814	1463	-10814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	880	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCAGGCGCTTCCGCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	49517509	49528045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49517665_49517946_49518065_49521095_49521251_49521339_49521503_49522805_49522933_49523969_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028
ENSMUSG00000020357.4_49517592_49528095_1	chr11	+	2005	15	ISM	ENSMUSG00000020357.4	ENST00000502649.5	3742	27	1545	10764	1545	-10764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGGAAGCAGCGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	49517591	49528095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49517665_49517946_49518065_49521095_49521251_49521339_49521503_49522805_49522933_49523969_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028
ENSMUSG00000020357.4_49517647_49528144_1	chr11	+	1999	15	ISM	ENSMUSG00000020357.4	ENST00000502649.5	3742	27	1600	10715	1600	-10715	internal_fragment	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGTGCACGGCGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	49517646	49528144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49517665_49517946_49518065_49521095_49521251_49521339_49521503_49522805_49522933_49523969_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028
ENSMUSG00000020357.4_49518008_49528670_1	chr11	+	2013	15	ISM	ENSMUSG00000020357.4	ENST00000502649.5	3742	27	1961	10189	1961	-10189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCCGGGGAATGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	49518007	49528670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49518065_49521095_49521251_49521339_49521503_49522805_49522933_49523969_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028_49528180_49528612
ENSMUSG00000020357.4_49521172_49529161_1	chr11	+	1990	15	ISM	ENSMUSG00000020357.4	ENST00000502649.5	3742	27	5125	9698	5125	-9698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	771	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCGCTCGGGACATCTAC	NA	NA	NA	NA	NA	NA	NA	NA	49521171	49529161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49521251_49521339_49521503_49522805_49522933_49523969_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028_49528180_49528612_49528708_49529088
ENSMUSG00000020357.4_49521339_49531120_1	chr11	+	2074	15	ISM	ENSMUSG00000020357.4	ENST00000502649.5	3742	27	5292	7739	5292	-7739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	963	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGAAGAGTGAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	49521338	49531120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49521503_49522805_49522933_49523969_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028_49528180_49528612_49528708_49529088_49529212_49531008
ENSMUSG00000020357.4_49521460_49533080_1	chr11	+	1986	16	ISM	ENSMUSG00000020357.4	ENST00000502649.5	3742	27	5413	5779	5413	-5779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	836	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTTCTGCCAGCGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	49521459	49533080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49521503_49522805_49522933_49523969_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028_49528180_49528612_49528708_49529088_49529212_49531008_49531121_49533047
ENSMUSG00000020357.4_49522806_49534301_1	chr11	+	2050	16	ISM	ENSMUSG00000020357.4	ENST00000502649.5	3742	27	6759	4558	6759	-4558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	894	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGACCTGCTTTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	49522805	49534301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49522933_49523969_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028_49528180_49528612_49528708_49529088_49529212_49531008_49531121_49533047_49533148_49534261
ENSMUSG00000020357.4_49524020_49535165_1	chr11	+	1994	16	ISM	ENSMUSG00000020357.4	ENSMUST00000020617.3	6255	30	23930	8401	7973	-3694	internal_fragment	TRUE	canonical	NA	NA	NA	NA	723	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCATGCAGGCATCCACC	NA	NA	NA	NA	NA	NA	NA	NA	49524019	49535165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028_49528180_49528612_49528708_49529088_49529212_49531008_49531121_49533047_49533148_49534261_49534368_49535110
ENSMUSG00000020357.4_49524890_49536742_1	chr11	+	1977	16	ISM	ENSMUSG00000020357.4	ENSMUST00000020617.3	6255	30	24800	6824	8843	-2117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGCCTGGCCAGAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	49524889	49536742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028_49528180_49528612_49528708_49529088_49529212_49531008_49531121_49533047_49533148_49534261_49534368_49535110_49535260_49536717
ENSMUSG00000020357.4_49524918_49536818_1	chr11	+	2019	16	NNC	ENSMUSG00000020357.4	novel	3742	27	NA	NA	8871	-2041	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTACAAAGCCTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	49524917	49536818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028_49528180_49528612_49528708_49529088_49529212_49531008_49531121_49533047_49533148_49534261_49534368_49535116_49535260_49536717
ENSMUSG00000020357.4_49525003_49538811_1	chr11	+	1998	17	ISM	ENSMUSG00000020357.4	ENSMUST00000020617.3	6255	30	24913	4755	8956	-48	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1063	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTTTGAGGAGCTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	49525002	49538811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028_49528180_49528612_49528708_49529088_49529212_49531008_49531121_49533047_49533148_49534261_49534368_49535110_49535260_49536717_49536839_49538773
ENSMUSG00000020357.4_49525046_49538848_1	chr11	+	1986	17	NNC	ENSMUSG00000020357.4	novel	3742	27	NA	NA	8999	-11	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCTTCAGGTAAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	49525045	49538848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028_49528180_49528612_49528708_49529088_49529212_49531008_49531121_49533047_49533148_49534261_49534368_49535116_49535260_49536717_49536839_49538773
ENSMUSG00000020357.4_49525058_49538859_1	chr11	+	1991	17	ISM	ENSMUSG00000020357.4	ENSMUST00000020617.3	6255	30	24968	4707	9011	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGCCTCCGACAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	49525057	49538859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028_49528180_49528612_49528708_49529088_49529212_49531008_49531121_49533047_49533148_49534261_49534368_49535110_49535260_49536717_49536839_49538773
ENSMUSG00000020358.18_51491392_51493448_1	chr11	-	943	2	ISM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	4226	465	4226	304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATCACAGATCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	51493448	51491391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51492306_51493419
ENSMUSG00000020358.18_51491520_51495316_1	chr11	-	979	3	ISM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	2358	593	2358	176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTTTCAGTCAAGTACAA	NA	NA	NA	NA	NA	NA	NA	NA	51495316	51491519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51492306_51493419_51493523_51495226
ENSMUSG00000020358.18_51491581_51495332_1	chr11	-	934	3	ISM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	2342	654	2342	115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCCATTGTCTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	51495332	51491580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51492306_51493419_51493523_51495226
ENSMUSG00000020358.18_51491696_51495644_1	chr11	-	1004	4	ISM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	2030	769	2030	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGGTAAATGTGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	51495644	51491695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485
ENSMUSG00000020358.18_51492001_51497256_1	chr11	-	958	6	ISM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	418	1074	418	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCTGTTCTAGATCAGG	NA	NA	NA	NA	NA	NA	NA	NA	51497256	51492000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166
ENSMUSG00000020358.18_51492001_51497306_1	chr11	-	1008	6	ISM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	368	1074	368	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCTGTTCTAGATCAGG	NA	NA	NA	NA	NA	NA	NA	NA	51497306	51492000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166
ENSMUSG00000020358.18_51492151_51497388_1	chr11	-	940	6	ISM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	286	1224	286	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTTTTATGGCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	51497388	51492150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166
ENSMUSG00000020358.18_51492266_51497557_1	chr11	-	914	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	117	1339	117	-265	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTCATCAGAATAACTACA	NA	NA	NA	NA	NA	NA	NA	NA	51497557	51492265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ENSMUSG00000020358.18_51492526_51495575_1	chr11	-	517	4	ISM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	2099	525	2099	-525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTGCAGGGGCCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	51495575	51492525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51492718_51493419_51493523_51495226_51495359_51495485
ENSMUSG00000020358.18_51493418_51497674_1	chr11	-	993	6	ISM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	0	1417	0	-1417	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGGAGCTGGATGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	51497674	51493417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ENSMUSG00000020359.14_51475634_51494674_1	chr11	+	2424	13	FSM	ENSMUSG00000020359.14	ENSMUST00000167797.8	3116	13	50	642	18	-642	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTCCAGAAAACTGACC	NA	NA	NA	NA	NA	NA	NA	NA	51475633	51494674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_51475707_51476340_51476460_51477387_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51493621
ENSMUSG00000020359.14_51475634_51494734_1	chr11	+	2484	13	FSM	ENSMUSG00000020359.14	ENSMUST00000167797.8	3116	13	50	582	18	-582	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCCAACCTGATCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	51475633	51494734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_51475707_51476340_51476460_51477387_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51493621
ENSMUSG00000020359.14_51477468_51494957_1	chr11	+	2435	11	ISM	ENSMUSG00000020359.14	ENSMUST00000167797.8	3116	13	1884	359	1852	-359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCAGGTCCGTTGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	51477467	51494957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51493621
ENSMUSG00000020359.14_51477515_51495026_1	chr11	+	2457	11	ISM	ENSMUSG00000020359.14	ENSMUST00000167797.8	3116	13	1931	290	1899	-290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGAAGGACCAGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	51477514	51495026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51493621
ENSMUSG00000020359.14_51483039_51495316_1	chr11	+	2508	8	ISM	ENSMUSG00000020359.14	ENSMUST00000167797.8	3116	13	7455	0	7423	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCAACTTGGGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	51483038	51495316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51493621
ENSMUSG00000020359.14_51483062_51495316_1	chr11	+	2485	8	ISM	ENSMUSG00000020359.14	ENSMUST00000167797.8	3116	13	7478	0	7446	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCAACTTGGGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	51483061	51495316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51493621
ENSMUSG00000020361.14_53150641_53155968_1	chr11	-	2392	4	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	35316	0	35316	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTCTTAATTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	53155968	53150640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860
ENSMUSG00000020361.14_53150759_53156769_1	chr11	-	2293	5	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	34515	118	34515	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATTATCCAAACTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	53156769	53150758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750
ENSMUSG00000020361.14_53150875_53157807_1	chr11	-	2299	6	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	33477	234	33477	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGCTAGAAATCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	53157807	53150874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792
ENSMUSG00000020361.14_53151027_53159336_1	chr11	-	2305	7	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	31948	386	31948	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCCAAGAGCTTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	53159336	53151026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316
ENSMUSG00000020361.14_53151154_53160554_1	chr11	-	2294	8	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	30730	513	30730	-513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGAAAGGAAGGAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	53160554	53151153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514
ENSMUSG00000020361.14_53151305_53161809_1	chr11	-	2322	9	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	29475	664	29475	-664	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGGTCTTTGTAATCG	NA	NA	NA	NA	NA	NA	NA	NA	53161809	53151304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772
ENSMUSG00000020361.14_53151367_53161853_1	chr11	-	2304	9	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	29431	726	29431	-726	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGATGCCTGCAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	53161853	53151366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772
ENSMUSG00000020361.14_53151416_53161906_1	chr11	-	2308	9	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	29378	775	29378	-775	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATACTCCTGGGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	53161906	53151415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772
ENSMUSG00000020361.14_53151595_53163705_1	chr11	-	2388	11	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	27579	954	27579	-954	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGGTATCTTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	53163705	53151594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553
ENSMUSG00000020361.14_53151729_53166026_1	chr11	-	2311	12	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	25258	1088	25258	-1088	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGTAGGCATGGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	53166026	53151728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969
ENSMUSG00000020361.14_53151831_53171370_1	chr11	-	2305	13	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	19914	1190	19914	-1190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGGGACTCTGCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	53171370	53151830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294
ENSMUSG00000020361.14_53151888_53171417_1	chr11	-	2295	13	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	19867	1247	19867	-1247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCCTTAAGCAGTATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	53171417	53151887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294
ENSMUSG00000020361.14_53151922_53171493_1	chr11	-	2337	13	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	19791	1281	19791	-1281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCCTCTATCCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	53171493	53151921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294
ENSMUSG00000020361.14_53152047_53174408_1	chr11	-	2311	14	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	16876	1406	16876	-1406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGATCACCACCAGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	53174408	53152046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355
ENSMUSG00000020361.14_53152346_53179905_1	chr11	-	2371	17	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	11379	1705	11379	-1705	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTAGTCAGTTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	53179905	53152345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850
ENSMUSG00000020361.14_53152608_53190941_1	chr11	-	2308	19	FSM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	343	1967	343	-1967	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCAAACCCAAAGTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	53190941	53152607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ENSMUSG00000020361.14_53152628_53191032_1	chr11	-	2379	19	FSM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	252	1987	252	-1987	multi-exon	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTCCTATAATTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	53191032	53152627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ENSMUSG00000020361.14_53153190_53191094_1	chr11	-	2327	18	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	190	2549	190	-2549	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGATGGAGTGGATGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	53191094	53153189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ENSMUSG00000020366.19_49745084_49765267_1	chr11	+	863	7	FSM	ENSMUSG00000020366.19	ENST00000539014.5	1365	7	7	495	0	-495	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGAGGGTCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	49745083	49765267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764870_49764937_49765090
ENSMUSG00000020366.19_49757812_49765480_1	chr11	+	818	5	ISM	ENSMUSG00000020366.19	ENST00000539014.5	1365	7	12735	282	12728	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACTGGGAAAGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	49757811	49765480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49757869_49759998_49760138_49763560_49763727_49764870_49764937_49765090
ENSMUSG00000020366.19_49760083_49765641_1	chr11	+	838	4	ISM	ENSMUSG00000020366.19	ENST00000539014.5	1365	7	15006	121	14999	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACTTTGTTGACATTT	NA	NA	NA	NA	NA	NA	NA	NA	49760082	49765641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49760138_49763560_49763727_49764870_49764937_49765090
ENSMUSG00000020366.19_49760093_49770597_1	chr11	+	280	3	ISM	ENSMUSG00000020366.19	ENST00000347470.8	1464	10	22494	3714	15009	-3540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGCGCCACCCGTAT	NA	NA	NA	NA	NA	NA	NA	NA	49760092	49770597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49760138_49763560_49763727_49770528
ENSMUSG00000020366.19_49763561_49765762_1	chr11	+	904	3	ISM	ENSMUSG00000020366.19	ENST00000539014.5	1365	7	18484	0	18477	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGCAGGAGGTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	49763560	49765762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49763727_49764870_49764937_49765090
ENSMUSG00000020366.19_49763701_49773015_1	chr11	+	273	4	ISM	ENSMUSG00000020366.19	ENST00000347470.8	1464	10	26102	1296	18617	-1122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTTCAGGTTGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	49763700	49773015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49763727_49770528_49770654_49772045_49772110_49772957
ENSMUSG00000020366.19_49769173_49774712_1	chr11	+	1065	5	ISM	ENSMUSG00000020366.19	ENSMUST00000043321.6	1297	11	24089	-575	24089	401	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAAATTTGTGATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	49769172	49774712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ENSMUSG00000020368.16_50185294_50199756_1	chr11	-	3284	11	ISM	ENSMUSG00000020368.16	ENST00000680006.1	3548	14	16635	59	16635	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	50199756	50185293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614
ENSMUSG00000020368.16_50185421_50201694_1	chr11	-	3290	13	ISM	ENSMUSG00000020368.16	ENST00000680006.1	3548	14	14697	186	14697	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCATTTTTCTTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	50201694	50185420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620
ENSMUSG00000020368.16_50185643_50202556_1	chr11	-	3194	14	ISM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	13944	349	13835	-349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATTACACCACACTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	50202556	50185642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430
ENSMUSG00000020368.16_50185749_50216500_1	chr11	-	3320	15	FSM	ENSMUSG00000020368.16	ENSMUST00000179865.8	4281	15	0	961	0	-455	multi-exon	FALSE	canonical	NA	NA	NA	NA	2622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATTTAGGGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	50216500	50185748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202608_50216319
ENSMUSG00000020368.16_50185802_50216500_1	chr11	-	3267	15	FSM	ENSMUSG00000020368.16	ENSMUST00000179865.8	4281	15	0	1014	0	-508	multi-exon	FALSE	canonical	NA	NA	NA	NA	2290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGTCCTGTTCAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	50216500	50185801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202608_50216319
ENSMUSG00000020368.16_50185882_50216500_1	chr11	-	3187	15	FSM	ENSMUSG00000020368.16	ENSMUST00000179865.8	4281	15	0	1094	0	-588	multi-exon	FALSE	canonical	NA	NA	NA	NA	1744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTGACTTTTGTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	50216500	50185881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202608_50216319
ENSMUSG00000020368.16_50186740_50216354_1	chr11	-	2165	15	FSM	ENSMUSG00000020368.16	ENST00000680618.1	3762	15	92	1505	37	-1446	multi-exon	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTAATTTAATATATTCA	NA	NA	NA	NA	NA	NA	NA	NA	50216354	50186739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202608_50216337
ENSMUSG00000020368.16_50186805_50216396_1	chr11	-	2142	15	FSM	ENSMUSG00000020368.16	ENST00000680618.1	3762	15	50	1570	-5	-1511	multi-exon	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCTTTTCCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	50216396	50186804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202608_50216337
ENSMUSG00000020368.16_50186866_50216500_1	chr11	-	2185	15	FSM	ENSMUSG00000020368.16	ENST00000680618.1	3762	15	-54	1631	0	-1572	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATGAAGCAACTAACTAG	NA	NA	NA	NA	NA	NA	NA	NA	50216500	50186865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202608_50216337
ENSMUSG00000020368.16_50199733_50249911_1	chr11	-	397	5	ISM	ENSMUSG00000020368.16	ENST00000681903.1	4191	15	475	14498	475	-14439	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAACAAAGCTTCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	50249911	50199732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50199757_50201198_50201258_50201620_50201695_50202430_50202608_50249848
ENSMUSG00000020372.16_48691187_48696901_1	chr11	+	394	3	FSM	ENSMUSG00000020372.16	ENST00000504726.1	362	3	-32	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTTCTGAAACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	48691186	48696901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_48691400_48696396_48696483_48696806
ENSMUSG00000020372.16_48691187_48697262_1	chr11	+	1447	8	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCCACCTTTCCCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	48691186	48697262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_48691400_48692494_48692666_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUSG00000020372.16_48691187_48697262_2	chr11	+	1442	8	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCCACCTTTCCCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	48691186	48697262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_48691400_48692489_48692662_48693099_48693242_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUSG00000020372.16_48691187_48697262_3	chr11	+	1442	8	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCCACCTTTCCCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	48691186	48697262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694321_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUSG00000020372.16_48691187_48697262_4	chr11	+	1437	8	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCCACCTTTCCCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	48691186	48697262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_48691400_48692489_48692666_48693114_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUSG00000020372.16_48691187_48697262_5	chr11	+	1442	8	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCCACCTTTCCCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	48691186	48697262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_48691400_48692489_48692662_48693099_48693248_48694236_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUSG00000020372.16_48691201_48695046_1	chr11	+	646	5	ISM	ENSMUSG00000020372.16	ENST00000511900.5	911	7	-18	1855	14	-1855	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCATCAATGCCTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	48691200	48695046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_48691400_48692489_48692666_48694230_48694327_48694684_48694796_48694982
ENSMUSG00000020372.16_48692583_48696900_1	chr11	+	528	5	ISM	ENSMUSG00000020372.16	ENST00000511566.5	803	6	1364	1	1364	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTTTCTGAAACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	48692582	48696900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48696806
ENSMUSG00000020372.16_48692600_48696900_1	chr11	+	619	6	ISM	ENSMUSG00000020372.16	ENST00000511900.5	911	7	1381	1	1381	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTTTCTGAAACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	48692599	48696900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_48692666_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUSG00000020375.10_50280697_50285786_1	chr11	-	255	4	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	36166	584	36166	-584	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGACAGCTGCCATACCC	NA	NA	NA	NA	NA	NA	NA	NA	50285786	50280696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747
ENSMUSG00000020375.10_50292305_50297227_1	chr11	-	260	3	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	24725	12192	24725	-12192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCAGGTGATGTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	50297227	50292304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50292363_50295280_50295449_50297193
ENSMUSG00000020375.10_50295395_50298726_1	chr11	-	248	3	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	23226	15282	23226	-15282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGAAGTTGCTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	50298726	50295394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50295449_50297193_50297311_50298649
ENSMUSG00000020375.10_50297217_50301462_1	chr11	-	266	3	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	20490	17104	20490	-17104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGGAGAAGAAAGTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	50301462	50297216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50297311_50298649_50298752_50301392
ENSMUSG00000020375.10_50301408_50308085_1	chr11	-	258	4	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	13867	21295	13867	-21295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTCAAGAAGAGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	50308085	50301407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50301463_50305343_50305410_50307066_50307129_50308010
ENSMUSG00000020375.10_50308056_50311273_1	chr11	-	251	3	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	10679	27943	10679	-27943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATGCCAACCTCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	50311273	50308055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50308135_50310447_50310550_50311203
ENSMUSG00000020375.10_50312509_50321731_1	chr11	-	243	2	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	221	32396	221	-32396	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGCAGTTCTTTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	50321731	50312508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_50312631_50321610
ENSMUSG00000020380.17_53540504_53582985_1	chr11	-	3325	17	ISM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	15161	158	15161	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAACAAAGGTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	53582985	53540503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939
ENSMUSG00000020380.17_53540607_53583093_1	chr11	-	3330	17	ISM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	15053	261	15053	-261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGGACACATCTAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	53583093	53540606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939
ENSMUSG00000020380.17_53540732_53583626_1	chr11	-	3350	18	ISM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	14520	386	14520	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCAGCTGGAGCCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	53583626	53540731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534
ENSMUSG00000020380.17_53543060_53589834_1	chr11	-	3388	21	ISM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	8312	2714	8312	-2714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATTTGAAGTTTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	53589834	53543059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648
ENSMUSG00000020380.17_53545728_53592914_1	chr11	-	3360	21	ISM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	5232	5382	5232	-5382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGATGCAGTGCTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	53592914	53545727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783
ENSMUSG00000020380.17_53558881_53597867_1	chr11	-	3342	21	ISM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	279	18535	279	-18535	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTCGACATCTACTACAA	NA	NA	NA	NA	NA	NA	NA	NA	53597867	53558880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ENSMUSG00000020380.17_53558973_53597960_1	chr11	-	3343	21	ISM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	186	18627	186	-18627	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAGCTCCGAGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	53597960	53558972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ENSMUSG00000020380.17_53559040_53598010_1	chr11	-	3326	21	ISM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	136	18694	136	-18694	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGAGAAATCACAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	53598010	53559039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ENSMUSG00000020380.17_53560484_53598122_1	chr11	-	3377	20	ISM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	24	20138	24	-20138	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATGCAAGTTTTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	53598122	53560483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ENSMUSG00000020381.11_50067668_50088520_1	chr11	+	435	5	ISM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	1992	2422	1992	-2422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACACCAGGTCAGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	50067667	50088520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50067714_50073318_50073408_50085034_50085111_50087770_50087920_50088445
ENSMUSG00000020381.11_50073350_50090412_1	chr11	+	418	5	ISM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	7674	530	7674	-530	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTACTGCGAACCACACCA	NA	NA	NA	NA	NA	NA	NA	NA	50073349	50090412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50073408_50085034_50085111_50087770_50087920_50088445_50088531_50090362
ENSMUSG00000020381.11_50087863_50090655_1	chr11	+	435	3	ISM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	22187	287	22187	-287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCCTCAAGCCATTCACA	NA	NA	NA	NA	NA	NA	NA	NA	50087862	50090655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50087920_50088445_50088531_50090362
ENSMUSG00000020385.17_51154013_51167074_1	chr11	+	1135	9	ISM	ENSMUSG00000020385.17	ENSMUST00000093132.13	1949	13	72	5517	0	-5517	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTAGTCACCAGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	51154012	51167074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51154097_51157997_51158159_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944
ENSMUSG00000020385.17_51157996_51168762_1	chr11	+	1136	9	ISM	ENSMUSG00000020385.17	ENSMUST00000093132.13	1949	13	4055	3829	3983	-3829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTATCTAATACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	51157995	51168762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51158159_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679
ENSMUSG00000020385.17_51162714_51172117_1	chr11	+	1071	11	ISM	ENSMUSG00000020385.17	ENSMUST00000093132.13	1949	13	8773	474	-1564	-474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGACGAAGAGCATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	51162713	51172117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ENSMUSG00000020385.17_51162826_51172226_1	chr11	+	1068	11	ISM	ENSMUSG00000020385.17	ENSMUST00000093132.13	1949	13	8885	365	-1452	-365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATTAAAAAGGAAATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	51162825	51172226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ENSMUSG00000020385.17_51163981_51172354_1	chr11	+	1096	10	ISM	ENSMUSG00000020385.17	ENSMUST00000093132.13	1949	13	10040	237	-297	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTAAATACTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	51163980	51172354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ENSMUSG00000020387.16_51707594_51716014_1	chr11	-	1311	3	ISM	ENSMUSG00000020387.16	ENST00000402835.5	2761	11	32395	4	31495	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCACCCCGTTGTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	51716014	51707593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51715769
ENSMUSG00000020387.16_51707605_51716106_1	chr11	-	1392	3	ISM	ENSMUSG00000020387.16	ENST00000402835.5	2761	11	32303	15	31403	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTCTGAATTCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	51716106	51707604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51715769
ENSMUSG00000020387.16_51707628_51716185_1	chr11	-	1448	3	ISM	ENSMUSG00000020387.16	ENST00000402835.5	2761	11	32224	38	31324	-38	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGTTTTATTTTTAATAT	NA	NA	NA	NA	NA	NA	NA	NA	51716185	51707627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51715769
ENSMUSG00000020387.16_51707747_51717412_1	chr11	-	1405	4	ISM	ENSMUSG00000020387.16	ENST00000402835.5	2761	11	30997	157	30097	-25	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCATGGGGGTGCTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	51717412	51707746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51715769_51716235_51717385
ENSMUSG00000020387.16_51707798_51717463_1	chr11	-	1405	4	ISM	ENSMUSG00000020387.16	ENST00000402835.5	2761	11	30946	208	30046	-76	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAGTGGGGTACAACGAG	NA	NA	NA	NA	NA	NA	NA	NA	51717463	51707797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51715769_51716235_51717385
ENSMUSG00000020387.16_51707906_51719163_1	chr11	-	1407	5	ISM	ENSMUSG00000020387.16	ENST00000402835.5	2761	11	29246	316	28346	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTACCGTCTGCTGTGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	51719163	51707905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51715769_51716235_51717385_51717503_51719092
ENSMUSG00000020387.16_51708056_51721308_1	chr11	-	1420	6	ISM	ENSMUSG00000020387.16	ENST00000402835.5	2761	11	27101	466	26201	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGACAAGACAGCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	51721308	51708055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51715769_51716235_51717385_51717503_51719092_51719261_51721242
ENSMUSG00000020387.16_51708117_51721354_1	chr11	-	1405	6	ISM	ENSMUSG00000020387.16	ENST00000402835.5	2761	11	27055	527	26155	-395	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGGGACTGTCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	51721354	51708116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51715769_51716235_51717385_51717503_51719092_51719261_51721242
ENSMUSG00000020387.16_51708119_51711947_1	chr11	-	583	3	ISM	ENSMUSG00000020387.16	ENST00000612830.2	2552	12	35973	397	35562	-397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTGGGGACTGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	51711947	51708118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51711905
ENSMUSG00000020387.16_51708170_51721404_1	chr11	-	1402	6	ISM	ENSMUSG00000020387.16	ENST00000402835.5	2761	11	27005	580	26105	-448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCATGAGGAAGCCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	51721404	51708169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51715769_51716235_51717385_51717503_51719092_51719261_51721242
ENSMUSG00000020387.16_51708186_51711986_1	chr11	-	555	3	ISM	ENSMUSG00000020387.16	ENST00000612830.2	2552	12	35934	464	35523	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGACGCAAGGACCACCC	NA	NA	NA	NA	NA	NA	NA	NA	51711986	51708185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51711905
ENSMUSG00000020387.16_51708276_51722154_1	chr11	-	1421	7	ISM	ENSMUSG00000020387.16	ENST00000402835.5	2761	11	26255	686	25355	-554	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGAAGAAACCATCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	51722154	51708275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079
ENSMUSG00000020387.16_51708337_51715869_1	chr11	-	541	4	ISM	ENSMUSG00000020387.16	ENST00000612830.2	2552	12	32051	615	31640	-615	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCTCGCTACGACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	51715869	51708336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769
ENSMUSG00000020387.16_51708378_51726421_1	chr11	-	1427	8	ISM	ENSMUSG00000020387.16	ENST00000402835.5	2761	11	21988	788	21088	-656	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGCTACAAGATGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	51726421	51708377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399
ENSMUSG00000020387.16_51708392_51715930_1	chr11	-	547	4	ISM	ENSMUSG00000020387.16	ENST00000612830.2	2552	12	31990	670	31579	-670	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGTCAGAGGAATTGC	NA	NA	NA	NA	NA	NA	NA	NA	51715930	51708391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769
ENSMUSG00000020387.16_51708438_51726466_1	chr11	-	1412	8	ISM	ENSMUSG00000020387.16	ENST00000402835.5	2761	11	21943	848	21043	-716	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTGGTCTTTGAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	51726466	51708437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399
ENSMUSG00000020387.16_51708460_51716011_1	chr11	-	560	4	ISM	ENSMUSG00000020387.16	ENST00000612830.2	2552	12	31909	738	31498	-738	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAGAGGACATGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	51716011	51708459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769
ENSMUSG00000020387.16_51708488_51726524_1	chr11	-	1420	8	ISM	ENSMUSG00000020387.16	ENST00000402835.5	2761	11	21885	898	20985	-766	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTTGGCACAGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	51726524	51708487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51708528_51709323_51709456_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399
ENSMUSG00000020387.16_51709322_51737528_1	chr11	-	1511	8	ISM	ENSMUSG00000020387.16	ENST00000402835.5	2761	11	10881	1732	9981	-1600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGAGGGGCCCTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	51737528	51709321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51709456_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432
ENSMUSG00000020387.16_51709417_51716167_1	chr11	-	555	3	ISM	ENSMUSG00000020387.16	ENST00000612830.2	2552	12	31753	1695	31342	-1695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAGGAAAGGCCGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	51716167	51709416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51709456_51711905_51712024_51715769
ENSMUSG00000020387.16_51711993_51747441_1	chr11	-	1527	10	FSM	ENSMUSG00000020387.16	ENST00000681498.1	1688	10	68	93	68	-93	multi-exon	FALSE	canonical	NA	NA	NA	NA	2032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAGAACGAAACACACC	NA	NA	NA	NA	NA	NA	NA	NA	51747441	51711992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51747379
ENSMUSG00000020387.16_51715880_51748254_1	chr11	-	1426	9	ISM	ENSMUSG00000020387.16	ENST00000402835.5	2761	11	155	8290	-31	-3980	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTTGACGCCCAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	51748254	51715879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51748152
ENSMUSG00000020387.16_51721406_51747952_1	chr11	-	615	6	ISM	ENSMUSG00000020387.16	ENST00000612830.2	2552	12	-32	13684	-32	-9506	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACATTGTGCCACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	51747952	51721405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51747858
ENSMUSG00000020388.13_53945774_53950793_1	chr11	-	786	5	ISM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	9047	20	8965	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTGCTTGCTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	53950793	53945773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53946066_53946182_53946301_53946615_53946780_53946968_53947151_53950763
ENSMUSG00000020388.13_53945953_53954490_1	chr11	-	686	6	ISM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	5350	199	5268	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTGAGAATCACGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	53954490	53945952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53946066_53946182_53946301_53946615_53946780_53946968_53947151_53950763_53950843_53954460
ENSMUSG00000020388.13_53946003_53954541_1	chr11	-	687	6	ISM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	5299	249	5217	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCCTGAATCTCAAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	53954541	53946002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53946066_53946182_53946301_53946615_53946780_53946968_53947151_53950763_53950843_53954460
ENSMUSG00000020388.13_53946033_53954612_1	chr11	-	728	6	ISM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	5228	279	5146	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCGGAGTGCTTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	53954612	53946032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53946066_53946182_53946301_53946615_53946780_53946968_53947151_53950763_53950843_53954460
ENSMUSG00000020388.13_53946182_53959758_1	chr11	-	789	6	ISM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	82	428	0	-408	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACCCAGTCTGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	53959758	53946181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53946301_53946615_53946780_53946968_53947151_53950763_53950843_53954460_53954613_53959665
ENSMUSG00000020389.20_51902107_51917626_1	chr11	+	608	6	ISM	ENSMUSG00000020389.20	ENSMUST00000109078.8	2216	9	7055	1084	151	-765	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTAATTCATTTATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	51902106	51917626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51902153_51909103_51909283_51910556_51910670_51913564_51913705_51916665_51916755_51917585
ENSMUSG00000020389.20_51909223_51917897_1	chr11	+	620	6	ISM	ENSMUSG00000020389.20	ENSMUST00000109078.8	2216	9	14171	813	7267	-494	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCAAAGGAGATGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	51909222	51917897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51909283_51910556_51910670_51913564_51913705_51916665_51916755_51917585_51917746_51917839
ENSMUSG00000020389.20_51913611_51918113_1	chr11	+	617	4	ISM	ENSMUSG00000020389.20	ENSMUST00000109078.8	2216	9	18559	597	11655	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTAATTTGTTGGCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	51913610	51918113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51913705_51916665_51916755_51917585_51917746_51917839
ENSMUSG00000020389.20_51913681_51920689_1	chr11	+	623	5	ISM	ENSMUSG00000020389.20	ENST00000523054.5	1732	12	11725	7645	11725	1979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACGCACTTCTTCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	51913680	51920689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51913705_51916665_51916755_51917585_51917746_51917839_51918169_51920668
ENSMUSG00000020389.20_51916666_51920762_1	chr11	+	672	4	ISM	ENSMUSG00000020389.20	ENST00000523054.5	1732	12	14710	7572	14710	2052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGACAAGATACTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	51916665	51920762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51916755_51917585_51917746_51917839_51918169_51920668
ENSMUSG00000020389.20_51917586_51923258_1	chr11	+	653	4	ISM	ENSMUSG00000020389.20	ENST00000523054.5	1732	12	15630	5076	15630	-1371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCTGAATTTTCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	51917585	51923258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51917746_51917839_51918169_51920668_51920763_51923188
ENSMUSG00000020389.20_51917667_51923351_1	chr11	+	665	4	ISM	ENSMUSG00000020389.20	ENST00000523054.5	1732	12	15711	4983	15711	-1278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTAGATGCTCGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	51917666	51923351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51917746_51917839_51918169_51920668_51920763_51923188
ENSMUSG00000020389.20_51917900_51927088_1	chr11	+	723	5	ISM	ENSMUSG00000020389.20	ENST00000523054.5	1732	12	15944	1246	15944	-1246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAACAACTCTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	51917899	51927088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51918169_51920668_51920763_51923188_51923352_51924340_51924439_51926989
ENSMUSG00000020389.20_51918124_51928335_1	chr11	+	571	6	ISM	ENSMUSG00000020389.20	ENST00000523054.5	1732	12	16168	-1	16168	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATCTTAAAAATACAAGC	NA	NA	NA	NA	NA	NA	NA	NA	51918123	51928335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_51918169_51920668_51920763_51923188_51923352_51924340_51924439_51926989_51927083_51928257
ENSMUSG00000020390.13_51876608_51882310_1	chr11	-	1209	3	ISM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	9001	284	9001	-284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCTTTTAATGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	51882310	51876607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51877638_51879438_51879528_51882220
ENSMUSG00000020390.13_51876608_51886226_1	chr11	-	1235	4	ISM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	5085	284	5085	-284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCTTTTAATGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	51886226	51876607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200
ENSMUSG00000020390.13_51876818_51891306_1	chr11	-	1297	5	NNC	ENSMUSG00000020390.13	novel	1792	6	NA	NA	5	-494	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTCACAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	51891306	51876817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_51877638_51879438_51879528_51882220_51882311_51888614_51888726_51891119
ENSMUSG00000020390.13_51876818_51891306_2	chr11	-	1293	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	5	494	5	-494	multi-exon	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTCACAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	51891306	51876817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
ENSMUSG00000020392.9_51858601_51867071_1	chr11	+	629	3	FSM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	113	1090	113	-1090	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATACAGTTCTTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	51858600	51867071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_51858785_51860970_51861071_51866726
ENSMUSG00000020392.9_51858719_51867113_1	chr11	+	553	3	FSM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	231	1048	231	-1048	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCCAAGGCAGATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	51858718	51867113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_51858785_51860970_51861071_51866726
ENSMUSG00000020393.17_5144506_5148368_1	chr11	-	675	2	ISM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	63190	2954	63190	-2954	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTACCATGTGTCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	5148368	5144505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5145122_5148309
ENSMUSG00000020393.17_5144620_5149614_1	chr11	-	700	3	ISM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	61944	3068	61944	-3068	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGACTGAAAGAACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5149614	5144619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5145122_5148309_5148395_5149501
ENSMUSG00000020393.17_5144865_5151829_1	chr11	-	685	4	ISM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	59729	3313	59729	-3313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCTCTTTTGGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	5151829	5144864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5145122_5148309_5148395_5149501_5149712_5151696
ENSMUSG00000020393.17_5144990_5151946_1	chr11	-	677	4	ISM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	59612	3438	59612	-3438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACAAGATGACCGCAATC	NA	NA	NA	NA	NA	NA	NA	NA	5151946	5144989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5145122_5148309_5148395_5149501_5149712_5151696
ENSMUSG00000020393.17_5145047_5152000_1	chr11	-	674	4	ISM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	59558	3495	59558	-3495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTATGAACCTTCCACTA	NA	NA	NA	NA	NA	NA	NA	NA	5152000	5145046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5145122_5148309_5148395_5149501_5149712_5151696
ENSMUSG00000020393.17_5148353_5160038_1	chr11	-	685	4	ISM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	51520	6801	51520	-6801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGCAGTTGTCGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	5160038	5148352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5148395_5149501_5149712_5151696_5152030_5159938
ENSMUSG00000020393.17_5149682_5165531_1	chr11	-	642	4	ISM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	46027	8130	46027	-8130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGTCAACCAGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	5165531	5149681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5149712_5151696_5152030_5159938_5160093_5165406
ENSMUSG00000020393.17_5151787_5193844_1	chr11	-	684	5	ISM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	17714	10235	17714	-10235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTCAATGTCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	5193844	5151786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5152030_5159938_5160093_5165406_5165532_5188410_5188503_5193774
ENSMUSG00000020397.16_46327832_46332549_1	chr11	+	1517	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	31	999	31	195	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTTTGCCCCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	46327831	46332549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_46328019_46330632_46330803_46331389
ENSMUSG00000020397.16_46327832_46332590_1	chr11	+	1558	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	31	958	31	236	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTCTATGAGAAATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	46327831	46332590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_46328019_46330632_46330803_46331389
ENSMUSG00000020397.16_46327832_46332938_1	chr11	+	1736	2	FSM	ENSMUSG00000020397.16	ENSMUST00000170928.8	2390	2	44	610	31	584	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAGTTAGAAAGTAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	46327831	46332938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_46328019_46331389
ENSMUSG00000020397.16_46327832_46333022_1	chr11	+	1820	2	FSM	ENSMUSG00000020397.16	ENSMUST00000170928.8	2390	2	44	526	31	-526	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTAGAGCTACTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	46327831	46333022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_46328019_46331389
ENSMUSG00000020397.16_46327942_46333059_1	chr11	+	1747	2	FSM	ENSMUSG00000020397.16	ENSMUST00000170928.8	2390	2	154	489	141	-489	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCTAGTAAATACCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	46327941	46333059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_46328019_46331389
ENSMUSG00000020397.16_46327949_46332667_1	chr11	+	1518	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	148	881	148	313	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTCAGTCTCAACATAG	NA	NA	NA	NA	NA	NA	NA	NA	46327948	46332667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_46328019_46330632_46330803_46331389
ENSMUSG00000020397.16_46330710_46332790_1	chr11	+	1494	2	ISM	ENSMUSG00000020397.16	ENSMUST00000020665.13	1193	3	2931	-436	2909	436	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTATATCCTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	46330709	46332790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_46330803_46331389
ENSMUSG00000020397.16_46330775_46332830_1	chr11	+	1469	2	ISM	ENSMUSG00000020397.16	ENSMUST00000020665.13	1193	3	2996	-476	2974	476	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACAGTTCTAATCACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	46330774	46332830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_46330803_46331389
ENSMUSG00000020400.18_54801613_54815037_1	chr11	-	1635	8	ISM	ENSMUSG00000020400.18	ENST00000521591.6	2705	16	16669	-4	16635	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	54815037	54801612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923
ENSMUSG00000020400.18_54807622_54831651_1	chr11	-	1773	14	NNC	ENSMUSG00000020400.18	novel	1839	14	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCGTGTGTCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	54831651	54807621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817615_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54830323_54830562_54831536
ENSMUSG00000020400.18_54807622_54831651_2	chr11	-	1766	14	NNC	ENSMUSG00000020400.18	novel	1839	14	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCGTGTGTCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	54831651	54807621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_54807814_54808081_54808148_54808625_54808752_54809431_54809552_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54830323_54830562_54831536
ENSMUSG00000020400.18_54807622_54831651_3	chr11	-	1774	14	NNC	ENSMUSG00000020400.18	novel	1839	14	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCGTGTGTCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	54831651	54807621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811707_54814918_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54830323_54830562_54831536
ENSMUSG00000020400.18_54807622_54831651_4	chr11	-	1770	14	NNC	ENSMUSG00000020400.18	novel	1839	14	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCGTGTGTCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	54831651	54807621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811704_54814919_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54830323_54830562_54831536
ENSMUSG00000020400.18_54807622_54831651_5	chr11	-	1773	14	NNC	ENSMUSG00000020400.18	novel	1839	14	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCGTGTGTCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	54831651	54807621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54830323_54830562_54831541
ENSMUSG00000020400.18_54807622_54831651_6	chr11	-	1778	14	FSM	ENSMUSG00000020400.18	ENST00000522226.5	1839	14	61	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCGTGTGTCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	54831651	54807621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54830323_54830562_54831536
ENSMUSG00000020400.18_54807622_54831651_7	chr11	-	1776	14	NNC	ENSMUSG00000020400.18	novel	1839	14	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCGTGTGTCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	54831651	54807621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54830325_54830562_54831536
ENSMUSG00000020400.18_54807622_54831651_8	chr11	-	1772	14	NNC	ENSMUSG00000020400.18	novel	1839	14	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCGTGTGTCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	54831651	54807621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_54807814_54808081_54808148_54808625_54808746_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54830323_54830562_54831536
ENSMUSG00000020400.18_54808082_54825007_1	chr11	-	1148	10	NNC	ENSMUSG00000020400.18	novel	1607	13	NA	NA	6665	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCAGCTGGAGGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	54825007	54808081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_54808148_54808625_54808752_54809431_54809564_54811586_54811707_54814919_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814
ENSMUSG00000020400.18_54808660_54830398_1	chr11	-	1203	11	NNC	ENSMUSG00000020400.18	novel	1607	13	NA	NA	1274	-578	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGGCCCAGGTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	54830398	54808659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_54808752_54809431_54809564_54811586_54811707_54814919_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54830323
ENSMUSG00000020400.18_54808719_54830454_1	chr11	-	1200	11	NNC	ENSMUSG00000020400.18	novel	1607	13	NA	NA	1218	-637	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAGTGACCGTGAACGCAT	NA	NA	NA	NA	NA	NA	NA	NA	54830454	54808718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_54808752_54809431_54809564_54811586_54811707_54814919_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54830323
ENSMUSG00000020400.18_54809437_54830564_1	chr11	-	1272	10	NNC	ENSMUSG00000020400.18	novel	1607	13	NA	NA	1108	-1355	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGTGAGGCCCGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	54830564	54809436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_54809564_54811586_54811707_54814919_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54830323
ENSMUSG00000020400.18_54811586_54831651_1	chr11	-	1256	10	NNC	ENSMUSG00000020400.18	novel	1607	13	NA	NA	21	-3504	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCACTAGGACCCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	54831651	54811585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_54811716_54814923_54815049_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54830323_54830562_54831536
ENSMUSG00000020401.7_46295557_46298809_1	chr11	+	1953	3	FSM	ENSMUSG00000020401.7	ENST00000302938.4	1844	3	-10	-99	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGAATTGTCTTCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	46295556	46298809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_46296254_46297321_46297454_46297685
ENSMUSG00000020401.7_46295690_46298809_1	chr11	+	1820	3	FSM	ENSMUSG00000020401.7	ENST00000302938.4	1844	3	123	-99	123	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGAATTGTCTTCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	46295689	46298809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_46296254_46297321_46297454_46297685
ENSMUSG00000020402.12_52251792_52265178_1	chr11	+	241	2	ISM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	105	15046	105	-14166	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACCAAGGGCTACGGTG	NA	NA	NA	NA	NA	NA	NA	NA	52251791	52265178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_52251980_52265125
ENSMUSG00000020402.12_52251962_52267303_1	chr11	+	224	4	ISM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	275	12921	275	-12041	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGACGTTTACAGAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	52251961	52267303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217
ENSMUSG00000020402.12_52267217_52274697_1	chr11	+	228	3	ISM	ENSMUSG00000020402.12	ENST00000603132.1	844	8	2088	4647	2088	-4647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGGGTACAAGAGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	52267216	52274697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_52267371_52267474_52267528_52274676
ENSMUSG00000020402.12_52267264_52274754_1	chr11	+	238	3	ISM	ENSMUSG00000020402.12	ENST00000603132.1	844	8	2135	4590	2135	-4590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCCTCGATCCGGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	52267263	52274754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_52267371_52267474_52267528_52274676
ENSMUSG00000020402.12_52267303_52274817_1	chr11	+	262	3	ISM	ENSMUSG00000020402.12	ENST00000603132.1	844	8	2174	4527	2174	-4527	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTGAGACCTCGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	52267302	52274817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_52267371_52267474_52267528_52274676
ENSMUSG00000020402.12_52267305_52279323_1	chr11	+	621	6	ISM	ENSMUSG00000020402.12	ENSMUST00000020673.3	891	8	2215	27	2176	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	931	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTAGGACTGGAATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	52267304	52279323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
ENSMUSG00000020402.12_52276410_52279350_1	chr11	+	301	3	ISM	ENSMUSG00000020402.12	ENST00000603132.1	844	8	11281	-6	11281	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATATTGTACAATCGTT	NA	NA	NA	NA	NA	NA	NA	NA	52276409	52279350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_52276561_52278242_52278301_52279258
ENSMUSG00000020407.14_9068627_9086082_1	chr11	+	1047	9	FSM	ENSMUSG00000020407.14	ENSMUST00000164791.8	1252	9	120	85	120	-82	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGGACGGGCCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	9068626	9086082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ENSMUSG00000020409.11_43328170_43332404_1	chr11	+	837	7	ISM	ENSMUSG00000020409.11	ENSMUST00000178622.3	3566	15	0	6404	0	-6404	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCACGTCAGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	43328169	43332404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272
ENSMUSG00000020409.11_43328305_43332721_1	chr11	+	774	8	ISM	ENSMUSG00000020409.11	ENSMUST00000178622.3	3566	15	135	6087	135	-6087	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAATGCAGGGAAGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	43328304	43332721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649
ENSMUSG00000020409.11_43329038_43333459_1	chr11	+	820	9	ISM	ENSMUSG00000020409.11	ENSMUST00000178622.3	3566	15	868	5349	868	-5349	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAGACTTCAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	43329037	43333459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366
ENSMUSG00000020409.11_43329981_43334151_1	chr11	+	770	8	ISM	ENSMUSG00000020409.11	ENSMUST00000178622.3	3566	15	1811	4657	1811	-4657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACAGAAGACTACGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	43329980	43334151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100
ENSMUSG00000020409.11_43330020_43334220_1	chr11	+	800	8	ISM	ENSMUSG00000020409.11	ENSMUST00000178622.3	3566	15	1850	4588	1850	-4588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCCAAGTACGAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	43330019	43334220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100
ENSMUSG00000020409.11_43331437_43335657_1	chr11	+	823	8	ISM	ENSMUSG00000020409.11	ENSMUST00000178622.3	3566	15	3267	3151	3267	-3151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATTACCCTCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	43331436	43335657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552
ENSMUSG00000020409.11_43332234_43337600_1	chr11	+	1692	9	ISM	ENSMUSG00000020409.11	ENSMUST00000178622.3	3566	15	4064	1208	4064	-1208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAATGTAGCCCCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	43332233	43337600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ENSMUSG00000020412.17_4587747_4633031_1	chr11	+	2296	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	0	354	0	-354	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCATGGCTGACCGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	4587746	4633031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ENSMUSG00000020412.17_4597061_4633385_1	chr11	+	2319	17	ISM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	9314	0	9314	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGTGACATGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	4597060	4633385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ENSMUSG00000020415.17_43311077_43317078_1	chr11	-	733	6	NNC	ENSMUSG00000020415.17	novel	741	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3007	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAACCCCTGATTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	43317078	43311076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_43311236_43311933_43312085_43313719_43313814_43315545_43315725_43316409_43316509_43317027
ENSMUSG00000020415.17_43311077_43317078_2	chr11	-	736	6	NNC	ENSMUSG00000020415.17	novel	741	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAACCCCTGATTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	43317078	43311076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315720_43316409_43316509_43317027
ENSMUSG00000020415.17_43311077_43317078_3	chr11	-	732	6	NNC	ENSMUSG00000020415.17	novel	741	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAACCCCTGATTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	43317078	43311076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_43311236_43311933_43312093_43313719_43313805_43315545_43315725_43316409_43316509_43317027
ENSMUSG00000020422.15_8480870_8550594_1	chr11	-	856	10	FSM	ENSMUSG00000020422.15	ENST00000458317.6	856	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACCCACAGGCTATGAC	NA	NA	NA	NA	NA	NA	NA	NA	8550594	8480869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8529052_8529122_8550554
ENSMUSG00000020423.7_134003047_134006858_1	chr1	-	2604	2	FSM	ENSMUSG00000020423.7	ENSMUST00000020692.7	2743	2	0	139	0	-139	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATAGCGCTGACTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	134006858	134003046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_134005442_134006649
ENSMUSG00000020424.4_4168225_4171966_1	chr11	+	1131	9	FSM	ENSMUSG00000020424.4	ENSMUST00000020699.4	1574	9	0	443	0	-443	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTTTTCTGAGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	4168224	4171966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_4168427_4168947_4169019_4170107_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842
ENSMUSG00000020424.4_4168378_4172020_1	chr11	+	1032	9	FSM	ENSMUSG00000020424.4	ENSMUST00000020699.4	1574	9	153	389	153	-389	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTCTGTCTGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	4168377	4172020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_4168427_4168947_4169019_4170107_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842
ENSMUSG00000020424.4_4170207_4172261_1	chr11	+	1054	7	ISM	ENSMUSG00000020424.4	ENSMUST00000020699.4	1574	9	1982	148	1982	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGACCTCCAGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	4170206	4172261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842
ENSMUSG00000020427.12_7157429_7159513_1	chr11	-	273	3	ISM	ENSMUSG00000020427.12	ENSMUST00000020702.11	2421	5	4384	1343	4384	257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATATATATATATATATA	NA	NA	NA	NA	NA	NA	NA	NA	7159513	7157428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_7157507_7158368_7158509_7159458
ENSMUSG00000020427.12_7158489_7160147_1	chr11	-	269	3	ISM	ENSMUSG00000020427.12	ENSMUST00000135887.3	1709	4	3776	803	3750	-803	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCGGGGCTTCTGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	7160147	7158488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_7158509_7159458_7159579_7160018
ENSMUSG00000020427.12_7160085_7163509_1	chr11	-	286	2	ISM	ENSMUSG00000020427.12	ENSMUST00000135887.3	1709	4	414	2399	388	-2399	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTATGAGTCTCAAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	7163509	7160084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_7160246_7163384
ENSMUSG00000020430.13_3914009_3928988_1	chr11	+	1861	15	FSM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	34	1016	34	-1016	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACTTTGGTGGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	3914008	3928988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ENSMUSG00000020430.13_3918260_3929109_1	chr11	+	1933	14	ISM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	4285	895	4285	-895	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGCTTTCTACAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	3918259	3929109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ENSMUSG00000020430.13_3920663_3929312_1	chr11	+	1861	12	ISM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	6688	692	6688	-692	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGGAAGGTAGAAAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	3920662	3929312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ENSMUSG00000020430.13_3923196_3929413_1	chr11	+	1891	11	ISM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	9221	591	9221	-591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTTAGGGTTGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	3923195	3929413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ENSMUSG00000020430.13_3923447_3929518_1	chr11	+	1825	10	ISM	ENSMUSG00000020430.13	ENSMUST00000109985.8	2923	15	9472	486	9472	-486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGAAGGTGAAAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	3923446	3929518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ENSMUSG00000020430.13_3925546_3929706_1	chr11	+	1904	9	ISM	ENSMUSG00000020430.13	ENSMUST00000109985.8	2923	15	11571	298	11571	-298	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTACAAAAGTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	3925545	3929706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ENSMUSG00000020430.13_3926287_3930004_1	chr11	+	1941	6	ISM	ENSMUSG00000020430.13	ENSMUST00000109985.8	2923	15	12312	0	12312	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGCTGCCCATTATTG	NA	NA	NA	NA	NA	NA	NA	NA	3926286	3930004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ENSMUSG00000020435.18_3653731_3769992_1	chr11	-	3370	13	NNC	ENSMUSG00000020435.18	novel	3431	13	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTTGCAGAGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	3769992	3653730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_3655208_3655388_3655616_3661693_3661870_3661957_3662054_3662125_3662230_3662458_3662575_3664470_3664717_3665087_3665235_3665496_3665552_3667096_3667215_3667791_3667987_3676318_3676576_3769836
ENSMUSG00000020435.18_3653731_3769992_2	chr11	-	3372	13	NNC	ENSMUSG00000020435.18	novel	3431	13	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTTGCAGAGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	3769992	3653730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_3655208_3655388_3655616_3661693_3661870_3661957_3662054_3662125_3662230_3662458_3662580_3664470_3664717_3665087_3665228_3665492_3665552_3667096_3667215_3667791_3667987_3676318_3676576_3769836
ENSMUSG00000020435.18_3653731_3769992_3	chr11	-	3373	13	ISM	ENSMUSG00000020435.18	ENSMUST00000070552.14	4097	14	43911	0	57	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTTGCAGAGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	3769992	3653730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3655208_3655388_3655616_3661693_3661870_3661957_3662054_3662125_3662230_3662458_3662580_3664470_3664717_3665087_3665235_3665496_3665552_3667096_3667215_3667793_3667987_3676318_3676576_3769836
ENSMUSG00000020435.18_3653731_3769992_4	chr11	-	3368	13	NNC	ENSMUSG00000020435.18	novel	4097	14	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTTGCAGAGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	3769992	3653730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_3655208_3655388_3655616_3661693_3661870_3661957_3662054_3662125_3662230_3662458_3662580_3664470_3664717_3665087_3665235_3665496_3665552_3667096_3667215_3667793_3667987_3676318_3676576_3769841
ENSMUSG00000020435.18_3653731_3769992_5	chr11	-	3369	13	NNC	ENSMUSG00000020435.18	novel	4097	14	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTTGCAGAGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	3769992	3653730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_3655208_3655388_3655616_3661693_3661870_3661957_3662054_3662125_3662230_3662458_3662580_3664470_3664717_3665087_3665235_3665496_3665552_3667096_3667215_3667793_3667979_3676314_3676576_3769836
ENSMUSG00000020436.18_41801215_41807213_1	chr11	-	2401	2	ISM	ENSMUSG00000020436.18	ENST00000641017.1	3581	9	83944	158	83944	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGGAAATAAAAATTAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	41807213	41801214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_41803513_41807110
ENSMUSG00000020436.18_41801302_41807240_1	chr11	-	2341	2	ISM	ENSMUSG00000020436.18	ENST00000641017.1	3581	9	83917	245	83917	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTCTTTGGGAGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	41807240	41801301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_41803513_41807110
ENSMUSG00000020436.18_41801358_41807286_1	chr11	-	2331	2	ISM	ENSMUSG00000020436.18	ENST00000641017.1	3581	9	83871	301	83871	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGATGTAAATAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	41807286	41801357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_41803513_41807110
ENSMUSG00000020436.18_41801506_41811337_1	chr11	-	2326	3	ISM	ENSMUSG00000020436.18	ENST00000641017.1	3581	9	79820	449	79820	-419	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAGATAATAGGAAGACAA	NA	NA	NA	NA	NA	NA	NA	NA	41811337	41801505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_41803513_41807110_41807317_41811224
ENSMUSG00000020436.18_41801732_41859707_1	chr11	-	2363	5	ISM	ENSMUSG00000020436.18	ENST00000641017.1	3581	9	31450	675	31450	-645	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGGAACAATATTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	41859707	41801731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_41803513_41807110_41807317_41811224_41811378_41858360_41858499_41859622
ENSMUSG00000020436.18_41801905_41862759_1	chr11	-	2410	6	ISM	ENSMUSG00000020436.18	ENST00000641017.1	3581	9	28398	848	28398	631	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGCAATTGTTGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	41862759	41801904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_41803513_41807110_41807317_41811224_41811378_41858360_41858499_41859622_41859706_41862537
ENSMUSG00000020436.18_41802053_41865720_1	chr11	-	2328	7	ISM	ENSMUSG00000020436.18	ENST00000641017.1	3581	9	25437	996	25437	483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCACATTACTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	41865720	41802052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_41803513_41807110_41807317_41811224_41811378_41858360_41858499_41859622_41859706_41862537_41862759_41865653
ENSMUSG00000020436.18_41802181_41891080_1	chr11	-	2380	9	FSM	ENSMUSG00000020436.18	ENST00000641017.1	3581	9	77	1124	77	355	multi-exon	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTTTACTTCTCAACAT	NA	NA	NA	NA	NA	NA	NA	NA	41891080	41802180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_41803513_41807110_41807317_41811224_41811378_41858360_41858499_41859622_41859706_41862537_41862759_41865653_41865722_41867361_41867514_41891053
ENSMUSG00000020436.18_41802258_41891183_1	chr11	-	2406	9	FSM	ENSMUSG00000020436.18	ENST00000641017.1	3581	9	-26	1201	0	278	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACAGAACTTGCTCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	41891183	41802257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_41803513_41807110_41807317_41811224_41811378_41858360_41858499_41859622_41859706_41862537_41862759_41865653_41865722_41867361_41867514_41891053
ENSMUSG00000020439.18_3467523_3474950_1	chr11	-	911	6	ISM	ENSMUSG00000020439.18	ENSMUST00000075118.10	3117	20	14289	0	2987	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTCTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	3474950	3467522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3467828_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882
ENSMUSG00000020439.18_3467523_3489292_1	chr11	-	3326	21	NNC	ENSMUSG00000020439.18	novel	3335	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1618	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTCTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	3489292	3467522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481514_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
ENSMUSG00000020439.18_3467523_3489292_2	chr11	-	3330	21	NNC	ENSMUSG00000020439.18	novel	3335	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1842	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTCTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	3489292	3467522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475202_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
ENSMUSG00000020439.18_3467642_3475115_1	chr11	-	861	7	ISM	ENSMUSG00000020439.18	ENSMUST00000075118.10	3117	20	14124	119	2822	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCACGCCCCCAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	3475115	3467641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3467828_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041
ENSMUSG00000020439.18_3467674_3475189_1	chr11	-	903	7	ISM	ENSMUSG00000020439.18	ENSMUST00000075118.10	3117	20	14050	151	2748	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTCACACCGCCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	3475189	3467673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3467828_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041
ENSMUSG00000020439.18_3467797_3476227_1	chr11	-	860	8	ISM	ENSMUSG00000020439.18	ENSMUST00000075118.10	3117	20	13012	274	1710	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGGACATGATGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	3476227	3467796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3467828_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164
ENSMUSG00000020439.18_3472484_3477491_1	chr11	-	884	8	NIC	ENSMUSG00000020439.18	novel	3037	20	NA	NA	446	-4961	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAAGACCCGCGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	3477491	3472483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_-_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3477427
ENSMUSG00000020439.18_3472856_3479575_1	chr11	-	873	8	ISM	ENSMUSG00000020439.18	ENST00000619644.4	3037	20	7812	5333	-1638	-5333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACAGAGTCTGCCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	3479575	3472855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3477427_3477521_3479439
ENSMUSG00000020439.18_3472917_3479812_1	chr11	-	895	9	ISM	ENSMUSG00000020439.18	ENST00000619644.4	3037	20	7575	5394	-1875	-5394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCAGCCTGGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	3479812	3472916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3477427_3477521_3479439_3479613_3479766
ENSMUSG00000020439.18_3474710_3479917_1	chr11	-	891	8	ISM	ENSMUSG00000020439.18	ENST00000619644.4	3037	20	7470	7187	-1980	-7187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACCACCACCACCACGGT	NA	NA	NA	NA	NA	NA	NA	NA	3479917	3474709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3477427_3477521_3479439_3479613_3479766
ENSMUSG00000020439.18_3475099_3480023_1	chr11	-	860	6	ISM	ENSMUSG00000020439.18	ENST00000619644.4	3037	20	7364	7576	-2086	-7576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGATGGCTCTACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	3480023	3475098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3475207_3476164_3476241_3476327_3476481_3477427_3477521_3479439_3479613_3479766
ENSMUSG00000020439.18_3475146_3480089_1	chr11	-	879	6	ISM	ENSMUSG00000020439.18	ENST00000619644.4	3037	20	7298	7623	-2152	-7623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAAGCAATGTGGCCACGG	NA	NA	NA	NA	NA	NA	NA	NA	3480089	3475145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3475207_3476164_3476241_3476327_3476481_3477427_3477521_3479439_3479613_3479766
ENSMUSG00000020439.18_3476440_3480403_1	chr11	-	857	5	ISM	ENSMUSG00000020439.18	ENST00000619644.4	3037	20	6984	8917	-2466	-8917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCTAATGGCGCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	3480403	3476439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3476481_3477427_3477521_3479439_3479613_3479766_3480283_3480369
ENSMUSG00000020439.18_3477428_3481119_1	chr11	-	929	5	ISM	ENSMUSG00000020439.18	ENST00000619644.4	3037	20	6268	9905	-3182	-9905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCAGCCCGTGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	3481119	3477427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3477521_3479439_3479613_3479766_3480283_3480369_3480442_3481044
ENSMUSG00000020440.14_28423589_28426102_1	chr6	+	587	6	FSM	ENSMUSG00000020440.14	ENSMUST00000020717.12	1116	6	30	499	0	-243	multi-exon	TRUE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGCCTGTATGATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	28423588	28426102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_28423755_28424288_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
ENSMUSG00000020440.14_28423708_28426131_1	chr6	+	497	6	FSM	ENSMUSG00000020440.14	ENSMUST00000020717.12	1116	6	149	470	119	-214	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCCACGAGCTGTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	28423707	28426131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_28423755_28424288_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
ENSMUSG00000020440.14_28423708_28426191_1	chr6	+	557	6	FSM	ENSMUSG00000020440.14	ENSMUST00000020717.12	1116	6	149	410	119	-154	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCGTGCATCCCGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	28423707	28426191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_28423755_28424288_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
ENSMUSG00000020440.14_28424312_28426345_1	chr6	+	641	5	ISM	ENSMUSG00000020440.14	ENSMUST00000169841.2	768	7	723	0	723	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTCTGCTCTCCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	28424311	28426345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
ENSMUSG00000020440.14_28424347_28426345_1	chr6	+	606	5	ISM	ENSMUSG00000020440.14	ENSMUST00000169841.2	768	7	758	0	758	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTCTGCTCTCCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	28424346	28426345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
ENSMUSG00000020441.7_59099256_59101245_1	chr11	+	857	7	FSM	ENSMUSG00000020441.7	ENSMUST00000020719.7	1285	7	109	319	109	-319	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCCTCTGTGGCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	59099255	59101245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_59099500_59099645_59099692_59099794_59099878_59099953_59100027_59100133_59100220_59100798_59100931_59101052
ENSMUSG00000020441.7_59099646_59101565_1	chr11	+	933	6	ISM	ENSMUSG00000020441.7	ENSMUST00000020719.7	1285	7	499	-1	499	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTATATTATCTCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	59099645	59101565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59099692_59099794_59099878_59099953_59100027_59100133_59100220_59100798_59100931_59101052
ENSMUSG00000020444.20_59074701_59082778_1	chr11	-	1073	8	NNC	ENSMUSG00000020444.20	novel	1078	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGTCACAGCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	59082778	59074700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_59075014_59075261_59075343_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
ENSMUSG00000020444.20_59074701_59082778_2	chr11	-	1069	8	NNC	ENSMUSG00000020444.20	novel	1078	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGTCACAGCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	59082778	59074700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_59075005_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
ENSMUSG00000020444.20_59074701_59082778_3	chr11	-	1072	8	NNC	ENSMUSG00000020444.20	novel	1078	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGTCACAGCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	59082778	59074700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_59075014_59075261_59075348_59075854_59075940_59076025_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
ENSMUSG00000020444.20_59074701_59082778_4	chr11	-	1073	8	NNC	ENSMUSG00000020444.20	novel	1078	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1061	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGTCACAGCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	59082778	59074700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077604_59077714_59082576
ENSMUSG00000020447.6_6164065_6172212_1	chr11	-	1328	10	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	7146	49	7146	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGTCTGCTACACGGC	NA	NA	NA	NA	NA	NA	NA	NA	6172212	6164064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6164174_6164259_6164374_6164525_6164758_6165020_6165231_6167477_6167534_6167706_6167834_6168233_6168362_6168551_6168743_6171824_6171915_6172141
ENSMUSG00000020447.6_6164137_6172271_1	chr11	-	1315	10	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	7087	121	7087	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCATCCTGGGCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	6172271	6164136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6164174_6164259_6164374_6164525_6164758_6165020_6165231_6167477_6167534_6167706_6167834_6168233_6168362_6168551_6168743_6171824_6171915_6172141
ENSMUSG00000020447.6_6164257_6173158_1	chr11	-	1419	10	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	6200	241	6200	-241	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGGAGGGATGGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	6173158	6164256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6164374_6164525_6164758_6165020_6165231_6167477_6167534_6167706_6167834_6168233_6168362_6168551_6168743_6171824_6171915_6172141_6172280_6173028
ENSMUSG00000020447.6_6164704_6174214_1	chr11	-	1314	11	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	5144	688	5144	-688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTTGCTCTCTGCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	6174214	6164703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6164758_6165020_6165231_6167477_6167534_6167706_6167834_6168233_6168362_6168551_6168743_6171824_6171915_6172141_6172280_6173028_6173157_6173320_6173436_6174137
ENSMUSG00000020447.6_6165070_6174786_1	chr11	-	1332	11	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	4572	1054	4572	-1054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGAAGGTGCCTGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	6174786	6165069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6165231_6167477_6167534_6167706_6167834_6168233_6168362_6168551_6168743_6171824_6171915_6172141_6172280_6173028_6173157_6173320_6173436_6174137_6174321_6174771
ENSMUSG00000020447.6_6165134_6174831_1	chr11	-	1313	11	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	4527	1118	4527	-1118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAGGACTTTACAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	6174831	6165133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6165231_6167477_6167534_6167706_6167834_6168233_6168362_6168551_6168743_6171824_6171915_6172141_6172280_6173028_6173157_6173320_6173436_6174137_6174321_6174771
ENSMUSG00000020447.6_6165170_6174902_1	chr11	-	1348	11	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	4456	1154	4456	-1154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGTTCATGGCCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	6174902	6165169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6165231_6167477_6167534_6167706_6167834_6168233_6168362_6168551_6168743_6171824_6171915_6172141_6172280_6173028_6173157_6173320_6173436_6174137_6174321_6174771
ENSMUSG00000020447.6_6167706_6175292_1	chr11	-	1403	10	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	4066	3690	4066	-3690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTCCGAGGGTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	6175292	6167705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6167834_6168233_6168362_6168551_6168743_6171824_6171915_6172141_6172280_6173028_6173157_6173320_6173436_6174137_6174321_6174771_6174901_6175119
ENSMUSG00000020447.6_6167809_6175681_1	chr11	-	1353	11	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	3677	3793	3677	-3793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAACCGCACTCTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	6175681	6167808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6167834_6168233_6168362_6168551_6168743_6171824_6171915_6172141_6172280_6173028_6173157_6173320_6173436_6174137_6174321_6174771_6174901_6175119_6175293_6175628
ENSMUSG00000020447.6_6168557_6177903_1	chr11	-	1318	10	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	1455	4541	1455	-4541	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTAAGTGGTTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	6177903	6168556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6168743_6171824_6171915_6172141_6172280_6173028_6173157_6173320_6173436_6174137_6174321_6174771_6174901_6175119_6175293_6175628_6175730_6177828
ENSMUSG00000020447.6_6171824_6178046_1	chr11	-	1276	9	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	1312	7808	1312	-7808	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGGCCTTTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	6178046	6171823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6171915_6172141_6172280_6173028_6173157_6173320_6173436_6174137_6174321_6174771_6174901_6175119_6175293_6175628_6175730_6177828
ENSMUSG00000020447.6_6171890_6178195_1	chr11	-	1359	9	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	1163	7874	1163	-7874	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAAACCTCTACTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	6178195	6171889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6171915_6172141_6172280_6173028_6173157_6173320_6173436_6174137_6174321_6174771_6174901_6175119_6175293_6175628_6175730_6177828
ENSMUSG00000020447.6_6173129_6178443_1	chr11	-	1344	7	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	915	9113	915	-9113	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTGCCTTGACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	6178443	6173128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6173157_6173320_6173436_6174137_6174321_6174771_6174901_6175119_6175293_6175628_6175730_6177828
ENSMUSG00000020447.6_6173413_6178551_1	chr11	-	1332	6	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	807	9397	807	-9397	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCGAGAGGCTCACATTG	NA	NA	NA	NA	NA	NA	NA	NA	6178551	6173412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6173436_6174137_6174321_6174771_6174901_6175119_6175293_6175628_6175730_6177828
ENSMUSG00000020447.6_6174267_6178688_1	chr11	-	1317	5	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	670	10251	670	-10251	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGCTGCCATGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	6178688	6174266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6174321_6174771_6174901_6175119_6175293_6175628_6175730_6177828
ENSMUSG00000020447.6_6174818_6178833_1	chr11	-	1362	4	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	525	10802	525	-10802	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCCCTGGCCCTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	6178833	6174817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6174901_6175119_6175293_6175628_6175730_6177828
ENSMUSG00000020447.6_6175191_6178950_1	chr11	-	1325	3	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	408	11175	408	-11175	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCTTGAAGGAAATGCAA	NA	NA	NA	NA	NA	NA	NA	NA	6178950	6175190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6175293_6175628_6175730_6177828
ENSMUSG00000020447.6_6175245_6178997_1	chr11	-	1318	3	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	361	11229	361	-11229	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTACCCCGCTGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	6178997	6175244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6175293_6175628_6175730_6177828
ENSMUSG00000020448.17_3367601_3382575_1	chr11	-	800	3	NNC	ENSMUSG00000020448.17	novel	800	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCCACTCCCTATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	3382575	3367600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_3368088_3369861_3369999_3382399
ENSMUSG00000020448.17_3367601_3382575_3	chr11	-	800	4	FSM	ENSMUSG00000020448.17	ENST00000266252.8	800	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCCACTCCCTATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	3382575	3367600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_3368088_3369861_3369980_3378883_3378903_3382399
ENSMUSG00000020448.17_3367601_3382575_4	chr11	-	794	3	NNC	ENSMUSG00000020448.17	novel	800	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCCACTCCCTATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	3382575	3367600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_3368088_3369861_3369993_3382399
ENSMUSG00000020448.17_3367601_3382575_5	chr11	-	785	3	NNC	ENSMUSG00000020448.17	novel	800	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCCACTCCCTATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	3382575	3367600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_3368088_3369861_3369980_3382395
ENSMUSG00000020448.17_3367601_3382575_6	chr11	-	784	3	NNC	ENSMUSG00000020448.17	novel	800	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCCACTCCCTATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	3382575	3367600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_3368088_3369862_3369980_3382395
ENSMUSG00000020451.18_3295820_3300704_1	chr11	-	496	6	ISM	ENSMUSG00000020451.18	ENST00000422830.1	1390	11	7595	58	5437	-58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCACTGCCAGCAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	3300704	3295819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297671_3300391_3300449_3300641
ENSMUSG00000020451.18_3296372_3303314_1	chr11	-	488	7	ISM	ENSMUSG00000020451.18	ENST00000422830.1	1390	11	4985	610	2827	-610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGATTGCCTGCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	3303314	3296371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3296393_3297051_3297108_3297573_3297671_3300391_3300449_3300641_3300774_3302290_3302378_3303276
ENSMUSG00000020451.18_3297573_3303465_1	chr11	-	563	5	ISM	ENSMUSG00000020451.18	ENST00000422830.1	1390	11	4834	1811	2676	-1811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTCAAAATCCATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	3303465	3297572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3297671_3300391_3300449_3300641_3300774_3302290_3302378_3303276
ENSMUSG00000020451.18_3297639_3305288_1	chr11	-	511	6	ISM	ENSMUSG00000020451.18	ENST00000422830.1	1390	11	3011	1877	853	-1877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACCGCAAAAAGCGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	3305288	3297638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3297671_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272
ENSMUSG00000020451.18_3300392_3305380_1	chr11	-	571	5	ISM	ENSMUSG00000020451.18	ENSMUST00000110029.9	2939	12	761	6136	761	-4630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCCTACCAGCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	3305380	3300391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272
ENSMUSG00000020451.18_3302287_3305916_1	chr11	-	581	4	ISM	ENSMUSG00000020451.18	ENSMUST00000110029.9	2939	12	225	8031	225	-6525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGGCCTTGGACTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	3305916	3302286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3302378_3303276_3303464_3305272_3305470_3305810
ENSMUSG00000020451.18_3303408_3308298_1	chr11	-	548	4	ISM	ENSMUSG00000020451.18	ENST00000422830.1	1390	11	1	7646	1	-7646	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAGCCGGGACATAAGC	NA	NA	NA	NA	NA	NA	NA	NA	3308298	3303407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3303464_3305272_3305470_3305810_3305917_3308109
ENSMUSG00000020453.18_3240769_3249160_1	chr11	+	1307	3	ISM	ENSMUSG00000020453.18	ENSMUST00000093402.12	3173	5	312	9923	312	3731	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAGTGAGGGGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	3240768	3249160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3241885_3243279_3243344_3249033
ENSMUSG00000020455.17_58868942_58882284_2	chr11	+	2255	5	FSM	ENSMUSG00000020455.17	ENST00000284551.11	1410	5	-122	-723	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	58868941	58882284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_58869471_58872066_58872163_58872818_58873050_58879628_58879756_58881012
ENSMUSG00000020455.17_58868942_58882284_3	chr11	+	2247	5	NNC	ENSMUSG00000020455.17	novel	2251	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	58868941	58882284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_58869471_58872066_58872163_58872818_58873050_58879636_58879756_58881012
ENSMUSG00000020455.17_58868942_58882284_4	chr11	+	2242	5	NNC	ENSMUSG00000020455.17	novel	2251	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	58868941	58882284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_58869471_58872066_58872163_58872818_58873050_58879641_58879756_58881012
ENSMUSG00000020456.18_6241633_6306036_1	chr11	+	3521	23	FSM	ENSMUSG00000020456.18	ENSMUST00000003461.15	4127	23	0	606	0	-542	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTCGTCACCCATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	6241632	6306036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUSG00000020456.18_6263790_6306242_1	chr11	+	3416	21	ISM	ENSMUSG00000020456.18	ENSMUST00000101554.9	4106	23	22124	336	21185	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGGAAACTTACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	6263789	6306242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUSG00000020456.18_6263839_6306301_1	chr11	+	3426	21	ISM	ENSMUSG00000020456.18	ENSMUST00000101554.9	4106	23	22173	277	21234	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTCCATTGGCTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	6263838	6306301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUSG00000020456.18_6263892_6306353_1	chr11	+	3425	21	ISM	ENSMUSG00000020456.18	ENSMUST00000101554.9	4106	23	22226	225	21287	-225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCCTGACCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	6263891	6306353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUSG00000020456.18_6267010_6306474_1	chr11	+	3426	20	ISM	ENSMUSG00000020456.18	ENSMUST00000101554.9	4106	23	25344	104	24405	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAGCAAGTTGTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	6267009	6306474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUSG00000020456.18_6267051_6306578_1	chr11	+	3489	20	ISM	ENSMUSG00000020456.18	ENSMUST00000101554.9	4106	23	25385	0	24446	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAAGAACAACCACCT	NA	NA	NA	NA	NA	NA	NA	NA	6267050	6306578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUSG00000020457.14_3199907_3202685_1	chr11	-	624	3	ISM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	13708	0	13708	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGAGGTTTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	3202685	3199906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3200366_3202159_3202283_3202643
ENSMUSG00000020457.14_3200097_3206617_1	chr11	-	766	5	ISM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	9776	190	9776	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGGCTGGCTTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	3206617	3200096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542
ENSMUSG00000020457.14_3200317_3209350_1	chr11	-	686	6	ISM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	7043	410	7043	-410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACCACACATTGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	3209350	3200316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305
ENSMUSG00000020457.14_3202160_3212536_1	chr11	-	710	6	ISM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	3857	2253	3857	-2253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCATCGTGGGCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	3212536	3202159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488
ENSMUSG00000020457.14_3202749_3214890_1	chr11	-	734	6	ISM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	1503	2842	1503	-2842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCTATAAGGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	3214890	3202748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766
ENSMUSG00000020457.14_3204512_3216392_1	chr11	-	795	6	ISM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	1	4605	1	-4605	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTCAGTGCGTCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	3216392	3204511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ENSMUSG00000020458.17_29668563_29692285_1	chr11	+	1142	7	FSM	ENSMUSG00000020458.17	ENSMUST00000060992.6	1773	7	0	631	0	174	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTATATTCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	29668562	29692285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_29668883_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ENSMUSG00000020458.17_29686400_29692916_1	chr11	+	1205	5	ISM	ENSMUSG00000020458.17	ENSMUST00000060992.6	1773	7	17837	0	17837	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	29686399	29692916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ENSMUSG00000020459.15_29480009_29486905_1	chr11	+	841	6	ISM	ENSMUSG00000020459.15	ENSMUST00000093239.11	2741	14	3552	8343	3552	-8343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTACGATGTGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	29480008	29486905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832
ENSMUSG00000020459.15_29483950_29490768_1	chr11	+	850	6	ISM	ENSMUSG00000020459.15	ENSMUST00000093239.11	2741	14	7493	4480	7493	-4480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAAGTTCCTTGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	29483949	29490768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608
ENSMUSG00000020459.15_29488696_29492470_1	chr11	+	823	5	ISM	ENSMUSG00000020459.15	ENSMUST00000093239.11	2741	14	12239	2778	12239	-2778	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAGATTGCCCCACACA	NA	NA	NA	NA	NA	NA	NA	NA	29488695	29492470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344
ENSMUSG00000020459.15_29490626_29495086_1	chr11	+	857	5	ISM	ENSMUSG00000020459.15	ENSMUST00000093239.11	2741	14	14169	162	14169	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCACATTAAAAATGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	29490625	29495086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ENSMUSG00000020460.16_29495899_29497944_1	chr11	-	571	6	NNC	ENSMUSG00000020460.16	novel	791	6	NA	NA	-84	-53	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACCAGAAGACAAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	29497944	29495898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680_29497740_29497836
ENSMUSG00000020460.16_29495899_29497944_2	chr11	-	573	6	FSM	ENSMUSG00000020460.16	ENSMUST00000102845.11	791	6	165	53	-84	-53	multi-exon	FALSE	canonical	NA	NA	NA	NA	5450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACCAGAAGACAAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	29497944	29495898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680_29497746_29497840
ENSMUSG00000020462.15_29171921_29172816_1	chr11	-	288	3	ISM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	24593	389	24593	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCAGAGAAACTTAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	29172816	29171920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_29171986_29172433_29172584_29172743
ENSMUSG00000020462.15_29172520_29175916_1	chr11	-	264	3	ISM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	21493	988	21493	-988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTGCTGTCCATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	29175916	29172519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_29172584_29172743_29172884_29175856
ENSMUSG00000020462.15_29172744_29179959_1	chr11	-	295	3	ISM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	17450	1212	17450	-1212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGAAAGCTAATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	29179959	29172743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_29172884_29175856_29175960_29179907
ENSMUSG00000020462.15_29180625_29194160_1	chr11	-	266	3	ISM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	3249	9093	3249	-9093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAACAGGAAGAGATGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	29194160	29180624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_29180674_29184357_29184473_29194058
ENSMUSG00000020463.16_29123123_29138491_1	chr11	+	1021	4	ISM	ENSMUSG00000020463.16	ENSMUST00000102856.9	2410	12	233	21150	233	-21150	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGTTTTTGAAGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	29123122	29138491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950
ENSMUSG00000020463.16_29123244_29155603_1	chr11	+	1630	11	ISM	ENSMUSG00000020463.16	ENSMUST00000102856.9	2410	12	354	4038	354	-4038	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACATCACACATACCACA	NA	NA	NA	NA	NA	NA	NA	NA	29123243	29155603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545
ENSMUSG00000020463.16_29138024_29159641_1	chr11	+	1624	9	ISM	ENSMUSG00000020463.16	ENSMUST00000102856.9	2410	12	15134	0	15134	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTTTATTCTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	29138023	29159641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316
ENSMUSG00000020463.16_29159408_29168856_1	chr11	+	1008	5	ISM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	36518	1941	36518	-1941	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTCCAACCTAGAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	29159407	29168856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ENSMUSG00000020463.16_29161724_29169182_1	chr11	+	998	3	ISM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	38834	1615	38834	-1615	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAGCATTTTTAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	29161723	29169182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29161792_29163593_29163797_29168455
ENSMUSG00000020464.16_29083855_29088587_1	chr11	+	624	7	ISM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	3107	23241	1015	-22880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAGTACACGAAGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	29083854	29088587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417
ENSMUSG00000020464.16_29084599_29090012_1	chr11	+	687	8	ISM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	3851	21816	1759	-21455	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTCATTTTTAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	29084598	29090012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947
ENSMUSG00000020464.16_29085512_29091320_1	chr11	+	672	8	ISM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	4764	20508	2672	-20147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATATATCTTCCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	29085511	29091320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223
ENSMUSG00000020464.16_29088187_29095499_1	chr11	+	651	7	ISM	ENSMUSG00000020464.16	ENST00000450418.1	2184	27	5347	15968	5347	-15968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTATATTTTGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	29088186	29095499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428
ENSMUSG00000020464.16_29088515_29097490_1	chr11	+	622	9	ISM	ENSMUSG00000020464.16	ENST00000450418.1	2184	27	5675	13977	5675	-13977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTACCATAAGAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	29088514	29097490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443
ENSMUSG00000020464.16_29089948_29103338_1	chr11	+	684	9	ISM	ENSMUSG00000020464.16	ENST00000450418.1	2184	27	7108	8129	7108	-8129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTATATTCCCAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	29089947	29103338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231
ENSMUSG00000020464.16_29091267_29104182_1	chr11	+	622	9	ISM	ENSMUSG00000020464.16	ENST00000450418.1	2184	27	8427	7285	8427	-7285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCGGTACAAATAAAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	29091266	29104182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143
ENSMUSG00000020464.16_29091662_29104365_1	chr11	+	667	9	ISM	ENSMUSG00000020464.16	ENST00000450418.1	2184	27	8822	7102	8822	-7102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCAGTGTGCCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	29091661	29104365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301
ENSMUSG00000020464.16_29095427_29104899_1	chr11	+	648	9	ISM	ENSMUSG00000020464.16	ENST00000450418.1	2184	27	12587	6568	12587	-6568	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGACATTAAAATTATTA	NA	NA	NA	NA	NA	NA	NA	NA	29095426	29104899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815
ENSMUSG00000020464.16_29097443_29106943_1	chr11	+	663	8	ISM	ENSMUSG00000020464.16	ENST00000450418.1	2184	27	14603	4524	14603	-4524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTACATCTCGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	29097442	29106943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836
ENSMUSG00000020464.16_29103230_29109403_1	chr11	+	655	8	ISM	ENSMUSG00000020464.16	ENST00000450418.1	2184	27	20390	2064	20390	-2064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAAGGAAAGTCTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	29103229	29109403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324
ENSMUSG00000020471.12_5822180_5824222_1	chr11	-	907	6	ISM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	4070	0	4070	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTCACTTGGGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	5824222	5822179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023
ENSMUSG00000020471.12_5822180_5824225_1	chr11	-	905	6	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	4067	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTCACTTGGGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	5824225	5822179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823413_5823567_5823688_5823770_5824023
ENSMUSG00000020471.12_5822180_5824429_1	chr11	-	1022	7	ISM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	3863	0	3863	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTCACTTGGGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	5824429	5822179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314
ENSMUSG00000020471.12_5822338_5824829_1	chr11	-	933	8	ISM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	3463	158	3463	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCCTGCCAGCCTATC	NA	NA	NA	NA	NA	NA	NA	NA	5824829	5822337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760
ENSMUSG00000020471.12_5822708_5825111_1	chr11	-	927	8	ISM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	3181	528	3181	-528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAACACCCCCAGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	5825111	5822707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053
ENSMUSG00000020471.12_5823026_5826764_1	chr11	-	980	8	ISM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	1528	846	1528	-846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTCAGCTACACTTG	NA	NA	NA	NA	NA	NA	NA	NA	5826764	5823025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712
ENSMUSG00000020471.12_5823460_5826873_1	chr11	-	909	7	ISM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	1419	1280	1419	-1280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTCCAGCTGGTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	5826873	5823459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712
ENSMUSG00000020471.12_5823688_5828212_1	chr11	-	940	7	ISM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	80	1508	80	-1508	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCAGCCTGGGGGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	5828212	5823687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828191
ENSMUSG00000020472.15_59377889_59394637_1	chr11	-	1797	7	NNC	ENSMUSG00000020472.15	novel	1804	7	NA	NA	1	1	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTGGCCCCACAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	59394637	59377888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_59378644_59382940_59383055_59383996_59384087_59384514_59384667_59390369_59390447_59393745_59393927_59394209
ENSMUSG00000020472.15_59377889_59394637_2	chr11	-	1798	7	NNC	ENSMUSG00000020472.15	novel	1804	7	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTGGCCCCACAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	59394637	59377888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_59378644_59382940_59383055_59383996_59384087_59384514_59384674_59390369_59390447_59393745_59393921_59394209
ENSMUSG00000020472.15_59377889_59394637_3	chr11	-	1804	7	FSM	ENSMUSG00000020472.15	ENST00000294753.8	1804	7	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTGGCCCCACAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	59394637	59377888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_59378644_59382940_59383055_59383996_59384087_59384514_59384674_59390369_59390447_59393745_59393927_59394209
ENSMUSG00000020472.15_59377889_59394637_4	chr11	-	1798	7	NNC	ENSMUSG00000020472.15	novel	1804	7	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTGGCCCCACAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	59394637	59377888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_59378644_59382946_59383055_59383996_59384087_59384514_59384674_59390369_59390447_59393745_59393927_59394209
ENSMUSG00000020473.14_5812120_5814034_1	chr11	+	375	2	ISM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	173	8054	173	-8054	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACCAAAGGAGAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	5812119	5814034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5812399_5813938
ENSMUSG00000020473.14_5812166_5814095_1	chr11	+	390	2	ISM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	219	7993	219	-7993	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCAAGAAGCCCAAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	5812165	5814095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5812399_5813938
ENSMUSG00000020473.14_5812233_5814152_1	chr11	+	380	2	ISM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	286	7936	286	-7936	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAAGGCCACTAAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	5812232	5814152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5812399_5813938
ENSMUSG00000020473.14_5812346_5814864_1	chr11	+	433	3	ISM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	399	7224	399	-7224	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGGTGGAGGCCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	5812345	5814864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5812399_5813938_5814278_5814823
ENSMUSG00000020473.14_5814032_5815234_1	chr11	+	425	4	ISM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	2085	6854	2085	-6854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCAGCAGGAGGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	5814031	5815234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5814278_5814823_5814896_5815016_5815089_5815199
ENSMUSG00000020473.14_5814256_5816475_1	chr11	+	389	6	ISM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	2309	5613	2309	-5613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACAAGAGGTGGATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	5814255	5816475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5814278_5814823_5814896_5815016_5815089_5815199_5815311_5815384_5815454_5816432
ENSMUSG00000020473.14_5815014_5817000_1	chr11	+	414	5	ISM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	3067	5088	-2588	-5088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCACGGGGCACCCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	5815013	5817000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5815089_5815199_5815311_5815384_5815454_5816432_5816511_5816919
ENSMUSG00000020473.14_5815255_5817690_1	chr11	+	389	6	ISM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	3308	4398	-2347	-4398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTCCTCCATGCTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	5815254	5817690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5815311_5815384_5815454_5816432_5816511_5816919_5817001_5817097_5817152_5817639
ENSMUSG00000020473.14_5815423_5817868_1	chr11	+	403	6	ISM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	3476	4220	-2179	-4220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGTCGCAGACCCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	5815422	5817868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5815454_5816432_5816511_5816919_5817001_5817097_5817152_5817639_5817750_5817819
ENSMUSG00000020473.14_5817136_5818510_1	chr11	+	387	5	ISM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	5189	3578	-466	-3578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCGAGCTCCCTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	5817135	5818510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5817152_5817639_5817750_5817819_5817960_5818296_5818382_5818474
ENSMUSG00000020473.14_5817883_5819484_1	chr11	+	588	6	ISM	ENSMUSG00000020473.14	ENSMUST00000109829.2	2541	12	281	2604	281	-2604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGCAATACCTATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	5817882	5819484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5817960_5818296_5818382_5818474_5818620_5818730_5818817_5819064_5819189_5819413
ENSMUSG00000020473.14_5818297_5819610_1	chr11	+	637	5	ISM	ENSMUSG00000020473.14	ENSMUST00000109829.2	2541	12	695	2478	695	-2478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGCTCAGTGTGGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	5818296	5819610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5818382_5818474_5818620_5818730_5818817_5819064_5819189_5819413
ENSMUSG00000020473.14_5818547_5819814_1	chr11	+	588	5	ISM	ENSMUSG00000020473.14	ENSMUST00000109829.2	2541	12	945	2274	945	-2274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTCCCCTACAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	5818546	5819814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5818620_5818730_5818817_5819064_5819189_5819413_5819611_5819706
ENSMUSG00000020473.14_5819148_5819841_1	chr11	+	373	3	ISM	ENSMUSG00000020473.14	ENSMUST00000109829.2	2541	12	1546	2247	1546	-2247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTTGCCAATCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	5819147	5819841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5819189_5819413_5819611_5819706
ENSMUSG00000020473.14_5819413_5820141_1	chr11	+	444	3	ISM	ENSMUSG00000020473.14	ENSMUST00000109829.2	2541	12	1811	1947	1811	-1947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAACGGTGGTGAGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	5819412	5820141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5819611_5819706_5819887_5820075
ENSMUSG00000020473.14_5819755_5820376_1	chr11	+	433	2	ISM	ENSMUSG00000020473.14	ENSMUST00000109829.2	2541	12	2153	1712	2153	-1712	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCGGCATGGGCATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5819754	5820376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5819887_5820075
ENSMUSG00000020473.14_5820291_5821271_1	chr11	+	404	4	ISM	ENSMUSG00000020473.14	ENSMUST00000109829.2	2541	12	2689	817	2689	-817	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCCGGGTGAGTACCGT	NA	NA	NA	NA	NA	NA	NA	NA	5820290	5821271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5820428_5820513_5820654_5820752_5820853_5821244
ENSMUSG00000020473.14_5820410_5821373_1	chr11	+	387	4	ISM	ENSMUSG00000020473.14	ENSMUST00000109829.2	2541	12	2808	715	2808	-715	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCTGGCTCGATCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	5820409	5821373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5820428_5820513_5820654_5820752_5820853_5821244
ENSMUSG00000020473.14_5820612_5821487_1	chr11	+	385	3	ISM	ENSMUSG00000020473.14	ENSMUST00000109829.2	2541	12	3010	601	3010	-601	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCAGCGCCGTCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	5820611	5821487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5820654_5820752_5820853_5821244
ENSMUSG00000020473.14_5820839_5821619_1	chr11	+	389	2	ISM	ENSMUSG00000020473.14	ENSMUST00000109829.2	2541	12	3237	469	3237	-469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTTGAGGCCCTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	5820838	5821619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5820853_5821244
ENSMUSG00000020474.12_5779028_5787752_1	chr11	-	1298	9	FSM	ENSMUSG00000020474.12	ENST00000395831.7	1301	9	4	-1	4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGAAATGCCTGTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	5787752	5779027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_5779141_5779290_5779395_5779476_5779726_5780067_5780201_5784757_5784814_5785415_5785587_5785700_5785800_5786193_5786375_5787560
ENSMUSG00000020476.15_5741791_5750814_1	chr11	+	2032	12	ISM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	3303	-185	3261	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGGAAGTATAAGTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	5741790	5750814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ENSMUSG00000020476.15_5743648_5750962_1	chr11	+	2125	11	ISM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	5160	-333	5118	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATATAACTGATGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	5743647	5750962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ENSMUSG00000020476.15_5743719_5750962_2	chr11	+	2054	11	ISM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	5231	-333	5189	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATATAACTGATGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	5743718	5750962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ENSMUSG00000020476.15_5744236_5750964_1	chr11	+	2007	10	NNC	ENSMUSG00000020476.15	novel	2001	13	NA	NA	5706	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATAACTGATGTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	5744235	5750964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749239_5749340_5749859
ENSMUSG00000020483.15_87871354_87874838_1	chr11	-	1184	2	FSM	ENSMUSG00000020483.15	ENSMUST00000178105.3	2187	2	0	1003	0	-1003	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGTGTGTGGGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	87874838	87871353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_87872397_87874697
ENSMUSG00000020483.15_87871422_87874838_1	chr11	-	1116	2	FSM	ENSMUSG00000020483.15	ENSMUST00000178105.3	2187	2	0	1071	0	-1071	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGTCTTAGCAATCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	87874838	87871421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_87872397_87874697
ENSMUSG00000020483.15_87871598_87878182_1	chr11	-	1052	3	FSM	ENSMUSG00000020483.15	ENSMUST00000020775.9	2476	3	177	1247	177	-1247	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTCCAGCCAGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	87878182	87871597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_87872397_87874697_87874837_87878068
ENSMUSG00000020484.20_5471179_5473361_1	chr11	+	148	3	ISM	ENSMUSG00000020484.20	ENSMUST00000239150.2	1116	6	184	1881	184	-1582	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACGGGAGAAAACTCACG	NA	NA	NA	NA	NA	NA	NA	NA	5471178	5473361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5471201_5471922_5472020_5473332
ENSMUSG00000020484.20_5474266_5474720_1	chr11	+	155	2	ISM	ENSMUSG00000020484.20	ENSMUST00000149623.8	897	4	2603	223	2603	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTCATGTTTTTCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	5474265	5474720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5474385_5474684
ENSMUSG00000020484.20_5474313_5474774_1	chr11	+	162	2	ISM	ENSMUSG00000020484.20	ENSMUST00000149623.8	897	4	2650	169	2650	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGGTCTACCCAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	5474312	5474774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5474385_5474684
ENSMUSG00000020484.20_5474363_5474829_1	chr11	+	167	2	ISM	ENSMUSG00000020484.20	ENSMUST00000149623.8	897	4	2700	114	2700	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGACCTCATCAGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	5474362	5474829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5474385_5474684
ENSMUSG00000020485.15_87628378_87634160_1	chr11	+	423	5	FSM	ENSMUSG00000020485.15	ENSMUST00000093955.12	706	5	0	283	0	-283	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTTCACTTCTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	87628377	87634160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_87628495_87628992_87629100_87633621_87633678_87633883_87633938_87634071
ENSMUSG00000020486.20_87469310_87481201_1	chr11	+	1081	11	FSM	ENSMUSG00000020486.20	ENSMUST00000122067.8	1303	11	60	162	60	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTTTGGACCTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	87469309	87481201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_87469364_87474746_87474841_87475224_87475312_87475943_87476068_87479543_87479679_87479793_87479912_87480000_87480103_87480293_87480391_87480481_87480645_87480834_87480882_87481141
ENSMUSG00000020486.20_87472011_87480875_1	chr11	+	1002	10	ISM	ENSMUSG00000020486.20	ENST00000579371.5	1327	11	111	474	111	-326	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGTGAGAGCAATACA	NA	NA	NA	NA	NA	NA	NA	NA	87472010	87480875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87472052_87474746_87474841_87475224_87475312_87475943_87476068_87479543_87479679_87479793_87479912_87480000_87480103_87480293_87480391_87480481_87480645_87480834
ENSMUSG00000020486.20_87474156_87480018_1	chr11	+	976	6	ISM	ENSMUSG00000020486.20	ENST00000426861.5	1778	9	13	1331	13	-1183	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTTGGAATCAAGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	87474155	87480018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87474441_87474746_87474841_87475224_87475312_87475943_87476068_87479543_87479912_87480000
ENSMUSG00000020486.20_87474269_87480308_1	chr11	+	962	7	ISM	ENSMUSG00000020486.20	ENST00000426861.5	1778	9	126	1041	126	-893	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGTGATTGGCAGCAACAC	NA	NA	NA	NA	NA	NA	NA	NA	87474268	87480308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87474441_87474746_87474841_87475224_87475312_87475943_87476068_87479543_87479912_87480000_87480103_87480293
ENSMUSG00000020486.20_87474386_87480528_1	chr11	+	974	8	ISM	ENSMUSG00000020486.20	ENST00000426861.5	1778	9	243	821	243	-673	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCGTACCCACATGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	87474385	87480528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87474441_87474746_87474841_87475224_87475312_87475943_87476068_87479543_87479912_87480000_87480103_87480293_87480391_87480481
ENSMUSG00000020486.20_87474785_87481203_1	chr11	+	991	10	ISM	ENSMUSG00000020486.20	ENST00000579371.5	1327	11	2885	146	642	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTTGGACCTGAATATT	NA	NA	NA	NA	NA	NA	NA	NA	87474784	87481203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87474841_87475224_87475312_87475943_87476068_87479543_87479679_87479793_87479912_87480000_87480103_87480293_87480391_87480481_87480645_87480834_87480882_87481141
ENSMUSG00000020486.20_87475222_87481276_1	chr11	+	1006	9	NNC	ENSMUSG00000020486.20	novel	1303	11	NA	NA	1079	24	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGACCCCCCGCAGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	87475221	87481276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_87475312_87475943_87476068_87479543_87479679_87479793_87479912_87480000_87480103_87480298_87480391_87480481_87480645_87480834_87480882_87481141
ENSMUSG00000020486.20_87476051_87480881_1	chr11	+	984	5	ISM	ENSMUSG00000020486.20	ENST00000426861.5	1778	9	1908	468	1908	-320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGAGCAATACAATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	87476050	87480881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87476068_87479543_87479912_87480000_87480103_87480293_87480391_87480481
ENSMUSG00000020486.20_87479694_87481365_1	chr11	+	1041	5	ISM	ENSMUSG00000020486.20	ENST00000426861.5	1778	9	5551	-16	5551	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTGTCTCTGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	87479693	87481365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87479912_87480000_87480103_87480293_87480391_87480481_87480882_87481141
ENSMUSG00000020492.12_87006929_87013431_1	chr11	+	937	3	ISM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	6869	2030	6869	-2030	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGGATACCCAGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	87006928	87013431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87007017_87008493_87008671_87012759
ENSMUSG00000020495.14_86968558_86971795_1	chr11	-	1223	2	ISM	ENSMUSG00000020495.14	ENSMUST00000020801.14	3218	4	5805	0	5805	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTATCTGTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	86971795	86968557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86968977_86970991
ENSMUSG00000020495.14_86974516_86977025_1	chr11	-	1261	2	ISM	ENSMUSG00000020495.14	ENSMUST00000020801.14	3218	4	575	5958	575	-5958	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATCCACCGGAGCCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	86977025	86974515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86974572_86975820
ENSMUSG00000020496.11_58823316_58824976_1	chr11	-	1051	2	ISM	ENSMUSG00000020496.11	ENSMUST00000094151.6	1949	4	4766	202	4766	-202	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGTAGATAACTAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	58824976	58823315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_58824223_58824832
ENSMUSG00000020496.11_58823425_58828058_1	chr11	-	1116	3	ISM	ENSMUSG00000020496.11	ENSMUST00000094151.6	1949	4	1684	311	1684	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTCACTTCGCTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	58828058	58823424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_58824223_58824832_58825058_58827965
ENSMUSG00000020496.11_58823600_58829388_1	chr11	-	1102	4	NNC	ENSMUSG00000020496.11	novel	1949	4	NA	NA	354	-486	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCAGGTCCTGGGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	58829388	58823599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_58824223_58824832_58825058_58827972_58828059_58829220
ENSMUSG00000020496.11_58823639_58829381_1	chr11	-	1063	4	FSM	ENSMUSG00000020496.11	ENSMUST00000094151.6	1949	4	361	525	361	-525	multi-exon	FALSE	canonical	NA	NA	NA	NA	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACCAGAGGACCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	58829381	58823638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_58824223_58824832_58825058_58827965_58828059_58829220
ENSMUSG00000020513.16_86435817_86456694_1	chr11	+	962	5	ISM	ENSMUSG00000020513.16	ENST00000539018.5	1046	6	-6	1258	0	-1258	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGAACATAAGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	86435816	86456694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_86436057_86445898_86446131_86448550_86448716_86452061_86452203_86456510
ENSMUSG00000020513.16_86435943_86457952_1	chr11	+	926	6	FSM	ENSMUSG00000020513.16	ENST00000539018.5	1046	6	120	0	120	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGTCTTGGACCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	86435942	86457952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_86436057_86445898_86446131_86448550_86448716_86452061_86452203_86456510_86456695_86457862
ENSMUSG00000020513.16_86440167_86456586_1	chr11	+	656	4	ISM	ENSMUSG00000020513.16	ENST00000376094.8	945	5	19	1438	19	-1366	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTTTGACAAGTATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	86440166	86456586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_86440298_86443613_86443831_86445898_86446131_86456510
ENSMUSG00000020513.16_86440207_86456647_1	chr11	+	677	4	ISM	ENSMUSG00000020513.16	ENST00000376094.8	945	5	59	1377	59	-1305	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGGATATGATTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	86440206	86456647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_86440298_86443613_86443831_86445898_86446131_86456510
ENSMUSG00000020513.16_86440262_86456693_1	chr11	+	668	4	ISM	ENSMUSG00000020513.16	ENST00000376094.8	945	5	114	1331	114	-1259	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAGTGAACATAAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	86440261	86456693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_86440298_86443613_86443831_86445898_86446131_86456510
ENSMUSG00000020513.16_86440274_86457896_1	chr11	+	691	5	FSM	ENSMUSG00000020513.16	ENST00000376094.8	945	5	126	128	126	-56	multi-exon	FALSE	canonical	NA	NA	NA	NA	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGGAAGACTTTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	86440273	86457896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_86440298_86443613_86443831_86445898_86446131_86456510_86456695_86457862
ENSMUSG00000020513.16_86443607_86457952_1	chr11	+	730	4	ISM	ENSMUSG00000020513.16	ENST00000376094.8	945	5	3459	72	3459	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGTCTTGGACCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	86443606	86457952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_86443831_86445898_86446131_86456510_86456695_86457862
ENSMUSG00000020514.9_58063900_58070175_1	chr11	+	363	5	ISM	ENSMUSG00000020514.9	ENSMUST00000020820.2	722	7	1413	216	1413	-216	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAAGGTCTATTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	58063899	58070175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
ENSMUSG00000020514.9_58063958_58070220_1	chr11	+	350	5	ISM	ENSMUSG00000020514.9	ENSMUST00000020820.2	722	7	1471	171	1471	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCCCCCACCCGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	58063957	58070220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
ENSMUSG00000020515.14_57995055_58000404_1	chr11	+	143	2	ISM	ENSMUSG00000020515.14	ENSMUST00000108843.8	2099	7	0	9016	0	-9016	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAACAGAAGGAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	57995054	58000404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57995175_58000381
ENSMUSG00000020515.14_58000573_58002219_1	chr11	+	154	2	ISM	ENSMUSG00000020515.14	ENSMUST00000108843.8	2099	7	5518	7201	-1512	-7201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGGGAGTACCCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58000572	58002219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_58000593_58002085
ENSMUSG00000020515.14_58002153_58003900_1	chr11	+	150	2	ISM	ENSMUSG00000020515.14	ENST00000517876.5	1034	6	68	5524	68	-5520	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAGATCTGCTTGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	58002152	58003900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_58002280_58003877
ENSMUSG00000020515.14_58002195_58008321_1	chr11	+	560	5	ISM	ENSMUSG00000020515.14	ENST00000517876.5	1034	6	110	1103	110	-1099	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACAGGGGTGGCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	58002194	58008321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ENSMUSG00000020515.14_58003951_58009307_1	chr11	+	649	5	ISM	ENSMUSG00000020515.14	ENST00000517876.5	1034	6	1866	117	1866	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	805	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAACTGAATTTGAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	58003950	58009307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_58004040_58004775_58004921_58006090_58006202_58008264_58008541_58009279
ENSMUSG00000020515.14_58004853_58009424_1	chr11	+	600	4	ISM	ENSMUSG00000020515.14	ENST00000517876.5	1034	6	2768	0	2768	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTGGTCTTTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	58004852	58009424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_58004921_58006090_58006202_58008264_58008541_58009279
ENSMUSG00000020516.16_86389840_86391966_1	chr11	-	1914	2	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	16498	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATAGAAGTGATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	86391966	86389839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_86391605_86391817
ENSMUSG00000020516.16_86389854_86391979_1	chr11	-	1917	2	ISM	ENSMUSG00000020516.16	ENST00000393021.7	5314	17	43673	13	16485	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTGAATGAACATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	86391979	86389853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86391610_86391818
ENSMUSG00000020516.16_86390010_86392150_1	chr11	-	1928	2	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	16314	-169	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTTGGCTTTGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	86392150	86390009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_86391605_86391817
ENSMUSG00000020516.16_86390972_86393106_1	chr11	-	1922	2	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	15358	-1131	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGTCACAGACAGAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	86393106	86390971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_86391605_86391817
ENSMUSG00000020516.16_86391106_86393237_1	chr11	-	1923	2	ISM	ENSMUSG00000020516.16	ENST00000393021.7	5314	17	42415	1265	15227	1048	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCCATCTACACAAATA	NA	NA	NA	NA	NA	NA	NA	NA	86393237	86391105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86391610_86391818
ENSMUSG00000020516.16_86391295_86393480_1	chr11	-	1977	2	ISM	ENSMUSG00000020516.16	ENST00000393021.7	5314	17	42172	1454	14984	859	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGCCTGGCCAAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	86393480	86391294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86391610_86391818
ENSMUSG00000020516.16_86391882_86395126_1	chr11	-	1942	2	ISM	ENSMUSG00000020516.16	ENST00000443572.6	1932	14	40460	-1300	13338	272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTAATTGAAGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	86395126	86391881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86393789_86395091
ENSMUSG00000020516.16_86391939_86395172_1	chr11	-	1931	2	ISM	ENSMUSG00000020516.16	ENST00000443572.6	1932	14	40414	-1243	13292	215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATAAAATTCTTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	86395172	86391938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86393789_86395091
ENSMUSG00000020516.16_86392216_86395167_1	chr11	-	584	2	ISM	ENSMUSG00000020516.16	ENST00000406116.7	1950	15	40405	62	13297	-62	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACATAAGTGATTTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	86395167	86392215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86392724_86395091
ENSMUSG00000020516.16_86392302_86404173_1	chr11	-	2005	7	ISM	ENSMUSG00000020516.16	ENST00000443572.6	1932	14	31413	-880	4291	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCTTCCATAACGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	86404173	86392301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125
ENSMUSG00000020516.16_86392584_86406990_1	chr11	-	1931	9	ISM	ENSMUSG00000020516.16	ENST00000443572.6	1932	14	28596	-598	1474	-430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCGAGGAGGGACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	86406990	86392583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916
ENSMUSG00000020516.16_86392652_86404174_1	chr11	-	591	7	ISM	ENSMUSG00000020516.16	ENST00000406116.7	1950	15	31398	498	4290	-498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGCCTGCACTACACT	NA	NA	NA	NA	NA	NA	NA	NA	86404174	86392651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86392724_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125
ENSMUSG00000020516.16_86392713_86408466_1	chr11	-	1887	10	ISM	ENSMUSG00000020516.16	ENST00000443572.6	1932	14	27120	-469	-2	469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGCGTAACTGCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	86408466	86392712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408
ENSMUSG00000020516.16_86392859_86423666_1	chr11	-	1958	12	ISM	ENSMUSG00000020516.16	ENST00000393021.7	5314	17	11986	3018	11906	323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCTGTGGCTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	86423666	86392858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597
ENSMUSG00000020516.16_86392977_86424943_1	chr11	-	1932	13	ISM	ENSMUSG00000020516.16	ENST00000393021.7	5314	17	10709	3136	10629	205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTCAGCTCATTATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	86424943	86392976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851
ENSMUSG00000020516.16_86393182_86435461_1	chr11	-	1807	14	FSM	ENSMUSG00000020516.16	ENST00000443572.6	1932	14	125	0	111	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTCAAATAAGGGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	86435461	86393181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86424851_86424973_86426236_86426287_86435391
ENSMUSG00000020516.16_86393254_86435461_1	chr11	-	1919	16	ISM	ENSMUSG00000020516.16	ENST00000393021.7	5314	17	191	3413	111	-72	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGCTGATGGCTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	86435461	86393253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86434756_86434872_86435391
ENSMUSG00000020516.16_86393254_86435461_2	chr11	-	1735	14	FSM	ENSMUSG00000020516.16	ENST00000443572.6	1932	14	125	72	111	-72	multi-exon	FALSE	canonical	NA	NA	NA	NA	2076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGCTGATGGCTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	86435461	86393253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86424851_86424973_86426236_86426287_86435391
ENSMUSG00000020516.16_86393425_86435591_1	chr11	-	1694	14	FSM	ENSMUSG00000020516.16	ENST00000443572.6	1932	14	-5	243	-5	127	multi-exon	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTTTCGATGGAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	86435591	86393424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86424851_86424973_86426236_86426287_86435391
ENSMUSG00000020516.16_86393425_86435631_1	chr11	-	1734	14	FSM	ENSMUSG00000020516.16	ENST00000443572.6	1932	14	-45	243	0	127	multi-exon	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTTTCGATGGAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	86435631	86393424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86424851_86424973_86426236_86426287_86435391
ENSMUSG00000020516.16_86393425_86435631_2	chr11	-	1918	16	ISM	ENSMUSG00000020516.16	ENST00000393021.7	5314	17	21	3584	0	127	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTTTCGATGGAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	86435631	86393424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86434756_86434872_86435391
ENSMUSG00000020516.16_86406959_86435470_1	chr11	-	584	7	ISM	ENSMUSG00000020516.16	ENST00000406116.7	1950	15	102	14805	102	-2150	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGACCTGAAGCCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	86435470	86406958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ENSMUSG00000020519.6_57692622_57700938_1	chr11	+	887	4	FSM	ENSMUSG00000020519.6	ENSMUST00000020826.6	1151	4	159	105	159	-105	multi-exon	FALSE	canonical	NA	NA	NA	NA	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGCCGGGTACTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	57692621	57700938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_57693116_57696869_57696993_57698849_57698949_57700767
ENSMUSG00000020519.6_57692909_57698948_1	chr11	+	306	2	ISM	ENSMUSG00000020519.6	ENST00000440364.6	685	3	47	2151	47	-2095	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTGGTAAAGCAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	57692908	57698948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57693116_57698849
ENSMUSG00000020519.6_57692909_57698948_2	chr11	+	291	2	ISM	ENSMUSG00000020519.6	ENST00000426761.2	670	3	47	2151	47	-2095	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTGGTAAAGCAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	57692908	57698948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57693116_57698864
ENSMUSG00000020519.6_57693040_57700911_1	chr11	+	319	3	FSM	ENSMUSG00000020519.6	ENST00000440364.6	685	3	178	188	178	-132	multi-exon	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTGAGGTGGGGGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	57693039	57700911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_57693116_57698849_57698949_57700767
ENSMUSG00000020519.6_57693040_57700911_2	chr11	+	304	3	FSM	ENSMUSG00000020519.6	ENST00000426761.2	670	3	178	188	178	-132	multi-exon	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTGAGGTGGGGGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	57693039	57700911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_57693116_57698864_57698949_57700767
ENSMUSG00000020520.15_57536482_57627841_1	chr11	+	342	4	ISM	ENSMUSG00000020520.15	ENST00000377661.2	1703	11	169	47718	169	10104	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCATCATCATCCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	57536481	57627841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57536544_57612120_57612224_57616348_57616488_57627803
ENSMUSG00000020520.15_57612200_57660340_1	chr11	+	353	4	ISM	ENSMUSG00000020520.15	ENST00000377661.2	1703	11	75887	15219	75887	-15219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCGTGTGCCCAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	57612199	57660340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57612224_57616348_57616488_57627803_57627971_57660317
ENSMUSG00000020520.15_57616390_57660393_1	chr11	+	341	3	ISM	ENSMUSG00000020520.15	ENST00000377661.2	1703	11	80077	15166	80077	-15166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCAGGCTGGGGACGCCA	NA	NA	NA	NA	NA	NA	NA	NA	57616389	57660393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57616488_57627803_57627971_57660317
ENSMUSG00000020520.15_57627804_57668564_1	chr11	+	763	5	ISM	ENSMUSG00000020520.15	ENSMUST00000066987.14	4715	12	91536	9776	91491	-6995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTAGTGGCTTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	57627803	57668564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57627971_57656385_57656572_57660317_57660502_57662293_57662412_57668456
ENSMUSG00000020520.15_57627872_57662380_1	chr11	+	370	3	ISM	ENSMUSG00000020520.15	ENST00000377661.2	1703	11	91559	13179	91559	-13179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGGAGAGCAGTATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	57627871	57662380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57627971_57660317_57660502_57662293
ENSMUSG00000020520.15_57660383_57671898_1	chr11	+	368	4	ISM	ENSMUSG00000020520.15	ENST00000377661.2	1703	11	124070	3661	124070	-3661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGATGGATGAATACGCAG	NA	NA	NA	NA	NA	NA	NA	NA	57660382	57671898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57660502_57662293_57662412_57668456_57668565_57671875
ENSMUSG00000020520.15_57660462_57671934_1	chr11	+	325	4	ISM	ENSMUSG00000020520.15	ENST00000377661.2	1703	11	124149	3625	124149	-3625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCGGAGTACCGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	57660461	57671934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57660502_57662293_57662412_57668456_57668565_57671875
ENSMUSG00000020520.15_57660481_57672026_1	chr11	+	398	4	ISM	ENSMUSG00000020520.15	ENST00000377661.2	1703	11	124168	3533	124168	-3533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCAAAATTGCCTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	57660480	57672026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57660502_57662293_57662412_57668456_57668565_57671875
ENSMUSG00000020520.15_57671924_57674615_1	chr11	+	391	3	ISM	ENSMUSG00000020520.15	ENST00000377661.2	1703	11	135611	944	135611	-944	internal_fragment	TRUE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACGACTGCCACAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	57671923	57674615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57672098_57673031_57673149_57674515
ENSMUSG00000020520.15_57672032_57675416_1	chr11	+	354	4	ISM	ENSMUSG00000020520.15	ENST00000377661.2	1703	11	135719	143	135719	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCGGCAGCTGCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	57672031	57675416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57672098_57673031_57673149_57674515_57674666_57675395
ENSMUSG00000020521.8_86375511_86379968_1	chr11	+	713	4	ISM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	28	9883	28	-9883	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCTCAGTCACTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	86375510	86379968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_86375626_86376886_86377332_86377481_86377559_86379892
ENSMUSG00000020521.8_86376922_86381337_1	chr11	+	742	4	ISM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	1439	8514	1439	-8514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAAAACTAACTAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	86376921	86381337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_86377332_86377481_86377559_86379892_86379994_86381183
ENSMUSG00000020521.8_86377024_86382550_1	chr11	+	686	5	ISM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	1541	7301	1541	-7301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTCCTATACCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	86377023	86382550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504
ENSMUSG00000020521.8_86377260_86386108_1	chr11	+	684	7	ISM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	1777	3743	1777	-3743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATGTCAAGCGGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	86377259	86386108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053
ENSMUSG00000020521.8_86377509_86386698_1	chr11	+	684	7	ISM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	2026	3153	2026	-3153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCACTGTGCAGAACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	86377508	86386698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
ENSMUSG00000020521.8_86379922_86386813_1	chr11	+	720	6	ISM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	4439	3038	4439	-3038	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTGGTTTGGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	86379921	86386813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
ENSMUSG00000020521.8_86381269_86386966_1	chr11	+	716	5	ISM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	5786	2885	5786	-2885	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAATATGCAACATTTA	NA	NA	NA	NA	NA	NA	NA	NA	86381268	86386966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
ENSMUSG00000020521.8_86382583_86387081_1	chr11	+	684	4	ISM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	7100	2770	7100	-2770	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGGGTTCAGGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	86382582	86387081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_86382664_86383986_86384053_86386053_86386156_86386646
ENSMUSG00000020521.8_86382641_86387150_1	chr11	+	695	4	ISM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	7158	2701	7158	-2701	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGTATCTGAAACAATTT	NA	NA	NA	NA	NA	NA	NA	NA	86382640	86387150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_86382664_86383986_86384053_86386053_86386156_86386646
ENSMUSG00000020521.8_86386112_86387358_1	chr11	+	756	2	ISM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	10629	2493	10629	-2493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAGATTCATTCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	86386111	86387358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_86386156_86386646
ENSMUSG00000020522.14_57418694_57422720_1	chr11	+	2848	2	ISM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	9181	1920	9181	-1920	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAGTTTCTTTAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	57418693	57422720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57419116_57420294
ENSMUSG00000020522.14_57419000_57422993_1	chr11	+	2815	2	ISM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	9487	1647	9487	-1647	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGAACTTCAAGGTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	57418999	57422993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57419116_57420294
ENSMUSG00000020523.15_57374350_57380996_1	chr11	-	732	3	ISM	ENSMUSG00000020523.15	ENSMUST00000108850.2	1765	14	28433	-268	24017	268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGGACAGGGCTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	57380996	57374349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_57374967_57378392_57378447_57380935
ENSMUSG00000020523.15_57374474_57382843_1	chr11	-	718	4	ISM	ENSMUSG00000020523.15	ENSMUST00000108850.2	1765	14	26586	-144	22170	144	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAACAAAACCTCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	57382843	57374473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745
ENSMUSG00000020523.15_57374618_57390631_1	chr11	-	819	6	ISM	ENSMUSG00000020523.15	ENSMUST00000108850.2	1765	14	18798	0	14382	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57390631	57374617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551
ENSMUSG00000020523.15_57374746_57396085_1	chr11	-	717	7	ISM	ENSMUSG00000020523.15	ENSMUST00000108850.2	1765	14	13344	128	8928	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGTGTGTGAAAGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	57396085	57374745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059
ENSMUSG00000020523.15_57374855_57397676_1	chr11	-	720	8	ISM	ENSMUSG00000020523.15	ENSMUST00000108850.2	1765	14	11753	237	7337	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCTCTGACAGAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	57397676	57374854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662
ENSMUSG00000020523.15_57374901_57397732_1	chr11	-	730	8	ISM	ENSMUSG00000020523.15	ENSMUST00000108850.2	1765	14	11697	283	7281	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCATCGAGAGCAAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	57397732	57374900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662
ENSMUSG00000020523.15_57374942_57397812_1	chr11	-	769	8	ISM	ENSMUSG00000020523.15	ENSMUST00000108850.2	1765	14	11617	324	7201	-324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCCTTCCAACTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	57397812	57374941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662
ENSMUSG00000020523.15_57380936_57400292_1	chr11	-	923	8	ISM	ENSMUSG00000020523.15	ENST00000351797.9	1267	12	4721	7038	4721	-6318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	730	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAATTCCTGCTCGCGG	NA	NA	NA	NA	NA	NA	NA	NA	57400292	57380935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203
ENSMUSG00000020523.15_57382831_57404120_1	chr11	-	818	8	ISM	ENSMUSG00000020523.15	ENST00000351797.9	1267	12	893	8933	893	-8213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGTTCCACAAAACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	57404120	57382830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067
ENSMUSG00000020523.15_57383829_57404561_1	chr11	-	904	8	ISM	ENSMUSG00000020523.15	ENST00000351797.9	1267	12	452	9931	452	-9211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACCAAAGCAACTAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	57404561	57383828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461
ENSMUSG00000020523.15_57383917_57404961_1	chr11	-	857	9	ISM	ENSMUSG00000020523.15	ENST00000351797.9	1267	12	52	10019	52	-9299	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTAGGCCAGTAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	57404961	57383916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920
ENSMUSG00000020523.15_57396116_57405067_1	chr11	-	791	7	ISM	ENSMUSG00000020523.15	ENST00000351797.9	1267	12	-54	22218	-54	-21498	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGAAGTGTTTTCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	57405067	57396115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920
ENSMUSG00000020523.15_57397661_57409429_1	chr11	-	803	7	ISM	ENSMUSG00000020523.15	ENSMUST00000020831.13	2557	14	14	23842	0	-23043	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCCATCCTCAGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	57409429	57397660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405115_57409398
ENSMUSG00000020524.17_57076725_57111962_1	chr11	+	654	5	ISM	ENSMUSG00000020524.17	ENST00000518783.1	5085	16	172372	108901	172372	-108901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGCCCTGGGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	57076724	57111962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57076859_57080478_57080664_57091951_57092006_57108597_57108760_57111843
ENSMUSG00000020524.17_57108632_57128937_1	chr11	+	677	5	ISM	ENSMUSG00000020524.17	ENST00000518783.1	5085	16	204279	91926	204279	-91926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGGCCTGGAATGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	57108631	57128937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57108760_57111843_57112012_57119746_57119852_57127719_57127831_57128772
ENSMUSG00000020524.17_57133662_57180254_1	chr11	+	664	3	ISM	ENSMUSG00000020524.17	ENST00000518783.1	5085	16	229309	40609	229309	-40609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTGGGAGGTAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	57133661	57180254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57133946_57174335_57174535_57180073
ENSMUSG00000020524.17_57133790_57200673_1	chr11	+	682	4	ISM	ENSMUSG00000020524.17	ENST00000518783.1	5085	16	229437	20190	229437	-20190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCGAGTGCGGCAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	57133789	57200673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_57133946_57174335_57174535_57180073_57180322_57200594
ENSMUSG00000020525.18_85202251_85230596_1	chr11	+	1261	5	ISM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	181	7296	181	-7296	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAAGTTCTACACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	85202250	85230596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379
ENSMUSG00000020525.18_85202496_85236698_1	chr11	+	1279	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	426	1194	426	-1194	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAACCAATTCAACAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	85202495	85236698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
ENSMUSG00000020525.18_85202587_85236766_1	chr11	+	1256	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	517	1126	517	-1126	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTCAAGAAGTTGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	85202586	85236766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
ENSMUSG00000020525.18_85202653_85236838_1	chr11	+	1262	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	583	1054	583	-1054	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGAAGCACCGACGAA	NA	NA	NA	NA	NA	NA	NA	NA	85202652	85236838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
ENSMUSG00000020525.18_85217731_85236996_1	chr11	+	1282	5	ISM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	15661	896	15661	-896	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAACAGTGTGTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	85217730	85236996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
ENSMUSG00000020525.18_85223096_85237178_1	chr11	+	1257	4	ISM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	21026	714	21026	-714	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTTGTAGATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	85223095	85237178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_85223202_85227890_85228082_85230379_85230623_85236461
ENSMUSG00000020525.18_85228008_85237401_1	chr11	+	1257	3	ISM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	25938	491	25938	-491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAAATTACTAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	85228007	85237401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_85228082_85230379_85230623_85236461
ENSMUSG00000020525.18_85230437_85237528_1	chr11	+	1253	2	ISM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	28367	364	28367	-364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAAACCTTTCATAGGA	NA	NA	NA	NA	NA	NA	NA	NA	85230436	85237528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_85230623_85236461
ENSMUSG00000020525.18_85230479_85237602_1	chr11	+	1285	2	ISM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	28409	290	28409	-290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGCAGTATCTCCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	85230478	85237602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_85230623_85236461
ENSMUSG00000020526.13_84801967_84807131_2	chr11	-	746	5	FSM	ENSMUSG00000020526.13	ENSMUST00000103195.5	998	5	61	191	61	-191	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAAGGTTGGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	84807131	84801966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_84802475_84804047_84804129_84805036_84805112_84806924_84806957_84807081
ENSMUSG00000020528.15_61620476_61639821_1	chr11	-	1276	7	ISM	ENSMUSG00000020528.15	ENSMUST00000004955.14	1837	12	13067	-4	13067	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGGATAGTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	61639821	61620475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737
ENSMUSG00000020528.15_61620622_61639858_1	chr11	-	1167	7	ISM	ENSMUSG00000020528.15	ENSMUST00000004955.14	1837	12	13030	142	13030	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACCTAGAATCAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	61639858	61620621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737
ENSMUSG00000020528.15_61620862_61647074_1	chr11	-	1153	10	ISM	ENSMUSG00000020528.15	ENSMUST00000004955.14	1837	12	5814	382	5814	-382	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATTCATTCCTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	61647074	61620861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020
ENSMUSG00000020528.15_61620913_61647124_1	chr11	-	1152	10	ISM	ENSMUSG00000020528.15	ENSMUST00000004955.14	1837	12	5764	433	5764	-433	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGCCCATGCCCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	61647124	61620912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020
ENSMUSG00000020530.15_84723187_84727339_1	chr11	-	1251	3	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	34225	0	34133	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCCTCTTCCTTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	84727339	84723186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84724040_84725160_84725410_84727190
ENSMUSG00000020530.15_84723490_84728810_1	chr11	-	1218	5	ISM	ENSMUSG00000020530.15	ENSMUST00000018547.9	2478	15	32662	-197	32662	197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACATCCACTTGCAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	84728810	84723489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666
ENSMUSG00000020530.15_84723798_84731228_1	chr11	-	1251	7	ISM	ENSMUSG00000020530.15	ENSMUST00000018547.9	2478	15	30244	111	30244	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGACTACTGCGCCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	84731228	84723797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086
ENSMUSG00000020530.15_84723972_84732303_1	chr11	-	1173	8	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	29261	785	29169	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAACCAGTCTTTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	84732303	84723971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240
ENSMUSG00000020530.15_84724026_84732359_1	chr11	-	1175	8	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	29205	839	29113	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTCAGATGAGGAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	84732359	84724025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240
ENSMUSG00000020530.15_84725338_84744993_1	chr11	-	1189	8	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	16571	2151	16479	-1540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACCGTGACAAGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	84744993	84725337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879
ENSMUSG00000020530.15_84727247_84749364_1	chr11	-	1160	8	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	12200	4060	12108	-3449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGAAAAAATAAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	84749364	84727246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265
ENSMUSG00000020530.15_84727436_84732319_1	chr11	-	706	5	ISM	ENSMUSG00000020530.15	ENSMUST00000018547.9	2478	15	29153	3749	29153	-3638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAACATGGTATGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	84732319	84727435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246
ENSMUSG00000020530.15_84727499_84732379_1	chr11	-	703	5	ISM	ENSMUSG00000020530.15	ENSMUST00000018547.9	2478	15	29093	3812	29093	-3701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGTGAAACAGGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	84732379	84727498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246
ENSMUSG00000020530.15_84728750_84753122_1	chr11	-	1171	8	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	8442	5563	8350	-4952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTAATGGTTACCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	84753122	84728749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063
ENSMUSG00000020530.15_84730806_84760760_1	chr11	-	1187	8	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	804	7619	712	-7008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTTCTTGCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	84760760	84730805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ENSMUSG00000020530.15_84730855_84760820_1	chr11	-	1198	8	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	744	7668	652	-7057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTCCTTACACACCGC	NA	NA	NA	NA	NA	NA	NA	NA	84760820	84730854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ENSMUSG00000020530.15_84730916_84760869_1	chr11	-	1186	8	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	695	7729	603	-7118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAGAAAAGAAACGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	84760869	84730915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ENSMUSG00000020530.15_84730967_84751485_1	chr11	-	742	6	ISM	ENSMUSG00000020530.15	ENSMUST00000100686.10	2275	14	10081	7169	9987	-7169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAACTTTGTGAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	84751485	84730966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370
ENSMUSG00000020530.15_84749288_84761551_1	chr11	-	729	5	ISM	ENSMUSG00000020530.15	ENSMUST00000108081.9	3034	14	64	26101	13	-25490	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACAAACCTAAACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	84761551	84749287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
ENSMUSG00000020530.15_84749337_84761624_1	chr11	-	753	5	ISM	ENSMUSG00000020530.15	ENSMUST00000108081.9	3034	14	-9	26150	-9	-25539	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTCCAAAAAGTAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	84761624	84749336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
ENSMUSG00000020532.19_84070684_84136145_1	chr11	+	1641	13	ISM	ENSMUSG00000020532.19	ENST00000614428.4	7547	56	39	154692	39	-154692	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGCCACGTGATTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	84070683	84136145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84070753_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032
ENSMUSG00000020532.19_84086264_84136683_1	chr11	+	1738	12	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	0	155788	0	-154154	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATGATAGCATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	84086263	84136683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519
ENSMUSG00000020532.19_84086370_84140279_1	chr11	+	1672	13	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	106	152192	106	-150558	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTCGAACTACAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	84086369	84140279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239
ENSMUSG00000020532.19_84086445_84140323_1	chr11	+	1641	13	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	181	152148	181	-150514	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCTTTCAGCTTAACA	NA	NA	NA	NA	NA	NA	NA	NA	84086444	84140323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239
ENSMUSG00000020532.19_84104982_84142161_1	chr11	+	1745	13	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	18718	150310	18718	-148676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTACCTTCTTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	84104981	84142161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057
ENSMUSG00000020532.19_84106658_84147591_1	chr11	+	1694	13	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	20394	144880	20394	-143246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGCAATCCCCACCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	84106657	84147591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509
ENSMUSG00000020532.19_84115270_84150299_1	chr11	+	1740	13	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	29006	142172	29006	-140538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGGGTGGGGAATAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	84115269	84150299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148
ENSMUSG00000020532.19_84129664_84153257_1	chr11	+	1647	12	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	43400	139214	43400	-137580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACCCCTCCTTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	84129663	84153257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221
ENSMUSG00000020532.19_84129704_84153332_1	chr11	+	1682	12	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	43440	139139	43440	-137505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGTCTATTAAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	84129703	84153332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221
ENSMUSG00000020532.19_84134141_84154876_1	chr11	+	1678	13	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	47877	137595	47877	-135961	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCGTGGCCACATGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	84134140	84154876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864
ENSMUSG00000020532.19_84136030_84161267_1	chr11	+	1749	13	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	49766	131204	49766	-129570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATCCAGTTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	84136029	84161267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142
ENSMUSG00000020532.19_84136616_84168664_1	chr11	+	1645	14	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	50352	123807	50352	-122173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGTAGAGTCTATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	84136615	84168664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621
ENSMUSG00000020532.19_84142066_84171336_1	chr11	+	1698	14	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	55802	121135	55802	-119501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGAGCTGGCACATG	NA	NA	NA	NA	NA	NA	NA	NA	84142065	84171336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217
ENSMUSG00000020532.19_84150212_84185821_1	chr11	+	1634	15	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	63948	106650	63948	-105016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGATGACAGGCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	84150211	84185821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763
ENSMUSG00000020532.19_84151495_84191282_1	chr11	+	1644	16	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	65231	101189	65231	-99555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTCATGTAAGTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	84151494	84191282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246
ENSMUSG00000020532.19_84152391_84202227_1	chr11	+	1685	17	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	66127	90244	66127	-88610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTGGAAGTAGGCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	84152390	84202227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092
ENSMUSG00000020532.19_84152462_84202262_1	chr11	+	1649	17	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	66198	90209	66198	-88575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTGTTCGTGCGATCA	NA	NA	NA	NA	NA	NA	NA	NA	84152461	84202262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092
ENSMUSG00000020532.19_84153357_84203682_1	chr11	+	1669	17	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	67093	88789	67093	-87155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGGTCATCATGGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	84153356	84203682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552
ENSMUSG00000020532.19_84154135_84206647_1	chr11	+	1652	17	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	67871	85824	67871	-84190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAATTGCGGGTCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	84154134	84206647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599
ENSMUSG00000020532.19_84161183_84211426_1	chr11	+	1690	16	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	74919	81045	74919	-79411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTTCTTCAATCAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	84161182	84211426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351
ENSMUSG00000020532.19_84169706_84229211_1	chr11	+	1663	15	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	83442	63260	83442	-61626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAATGACATTACATATCG	NA	NA	NA	NA	NA	NA	NA	NA	84169705	84229211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139
ENSMUSG00000020532.19_84183759_84232818_1	chr11	+	1666	13	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	97495	59653	97495	-58019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAACATGTGGAGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	84183758	84232818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752
ENSMUSG00000020532.19_84185810_84237599_1	chr11	+	1643	13	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	99546	54872	99546	-53238	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTCACTTAATTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	84185809	84237599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530
ENSMUSG00000020532.19_84202105_84255184_1	chr11	+	1643	11	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	115841	37287	115841	-35653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGATCCTATAGATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	84202104	84255184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152
ENSMUSG00000020532.19_84202230_84259558_1	chr11	+	1669	12	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	115966	32913	115966	-31279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGCACAGACCGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	84202229	84259558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496
ENSMUSG00000020532.19_84203650_84263426_1	chr11	+	1647	13	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	117386	29045	117386	-27411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTCCCAGACTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	84203649	84263426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404
ENSMUSG00000020532.19_84206598_84263540_1	chr11	+	1704	12	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	120334	28931	120334	-27297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTGATGGGCCAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	84206597	84263540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404
ENSMUSG00000020532.19_84206716_84271388_1	chr11	+	1647	13	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	120452	21083	120452	-19449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTGTAATGGTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	84206715	84271388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327
ENSMUSG00000020532.19_84211443_84273314_1	chr11	+	1642	13	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	125179	19157	125179	-17523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAAAACCATGCGTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	84211442	84273314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257
ENSMUSG00000020532.19_84213314_84282374_1	chr11	+	1667	13	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	127050	10097	127050	-8463	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAGTTGAAGGAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	84213313	84282374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335
ENSMUSG00000020532.19_84213382_84282422_1	chr11	+	1647	13	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	127118	10049	127118	-8415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAGCTGTGCAGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	84213381	84282422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335
ENSMUSG00000020532.19_84213436_84282480_1	chr11	+	1651	13	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	127172	9991	127172	-8357	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCATTAACGTAAGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	84213435	84282480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335
ENSMUSG00000020532.19_84229343_84288925_1	chr11	+	1650	14	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	143079	3546	143079	-1912	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGCAACTGACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	84229342	84288925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884
ENSMUSG00000020532.19_84236880_84290537_1	chr11	+	1645	13	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	150616	1934	150616	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGGAGAAGAGAGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	84236879	84290537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ENSMUSG00000020532.19_84237598_84290647_1	chr11	+	1655	12	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	151334	1824	151334	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGCATGACATCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	84237597	84290647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ENSMUSG00000020532.19_84254561_84290749_1	chr11	+	1642	11	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	168297	1722	168297	-88	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGACTGAGAAGGCAATGA	NA	NA	NA	NA	NA	NA	NA	NA	84254560	84290749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ENSMUSG00000020532.19_84254616_84290806_1	chr11	+	1644	11	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	168352	1665	168352	-31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGGACTGCCCTCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	84254615	84290806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ENSMUSG00000020534.15_60679727_60683862_1	chr11	-	732	4	ISM	ENSMUSG00000020534.15	ENST00000354098.7	1242	9	11374	-245	11374	245	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTCTGCTTACTCGG	NA	NA	NA	NA	NA	NA	NA	NA	60683862	60679726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774
ENSMUSG00000020534.15_60679970_60688428_1	chr11	-	719	6	ISM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	13663	1040	6808	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAACAGCCTGTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	60688428	60679969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350
ENSMUSG00000020534.15_60679970_60695188_1	chr11	-	1196	9	FSM	ENSMUSG00000020534.15	ENST00000354098.7	1242	9	48	-2	48	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAACAGCCTGTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	60695188	60679969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088
ENSMUSG00000020534.15_60680074_60688551_1	chr11	-	738	6	ISM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	13540	1144	6685	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGGCAGGAGATGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	60688551	60680073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350
ENSMUSG00000020534.15_60681002_60692335_1	chr11	-	704	6	ISM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	9756	2072	2901	-1030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCGCCTGCAACAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	60692335	60681001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253
ENSMUSG00000020534.15_60685722_60695152_1	chr11	-	693	6	ISM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	6939	6792	84	-5750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCAACTCTGCCGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	60695152	60685721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088
ENSMUSG00000020534.15_60692272_60701919_1	chr11	-	692	5	ISM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	172	13342	172	-12300	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCCATGCCTTATAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	60701919	60692271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ENSMUSG00000020534.15_60692330_60701971_1	chr11	-	686	5	ISM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	120	13400	120	-12358	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACCCATGGCTTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	60701971	60692329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ENSMUSG00000020536.13_60597796_60604264_1	chr11	+	2591	13	ISM	ENSMUSG00000020536.13	ENSMUST00000108719.4	4268	21	7125	748	7125	-748	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCCACAGAGCCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	60597795	60604264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ENSMUSG00000020536.13_60600321_60605012_1	chr11	+	2584	8	ISM	ENSMUSG00000020536.13	ENSMUST00000108719.4	4268	21	9650	0	9650	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGCACACATGTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	60600320	60605012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ENSMUSG00000020537.10_60345450_60359580_1	chr11	+	1750	13	NNC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGGAACTTGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	60345449	60359580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_60345570_60347376_60347533_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ENSMUSG00000020537.10_60345450_60359580_2	chr11	+	1749	13	NNC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGGAACTTGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	60345449	60359580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352345_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ENSMUSG00000020537.10_60345450_60359580_3	chr11	+	1749	13	NNC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGGAACTTGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	60345449	60359580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351618_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ENSMUSG00000020537.10_60345450_60359580_4	chr11	+	1747	13	NNC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGGAACTTGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	60345449	60359580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351696_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ENSMUSG00000020537.10_60345450_60359580_5	chr11	+	1747	13	NNC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGGAACTTGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	60345449	60359580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353453_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ENSMUSG00000020537.10_60345450_60359580_6	chr11	+	1747	13	NNC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGGAACTTGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	60345449	60359580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358897
ENSMUSG00000020537.10_60354980_60358975_1	chr11	+	252	4	ISM	ENSMUSG00000020537.10	ENST00000395726.8	1087	13	9483	0	9483	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGACACCTTCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	60354979	60358975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60355049_60355658_60355718_60358510_60358549_60358889
ENSMUSG00000020538.16_60090165_60094943_1	chr11	-	2462	12	ISM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	16487	250	16487	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCATCTCTGTGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	60094943	60090164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896
ENSMUSG00000020538.16_60090224_60094994_1	chr11	-	2454	12	ISM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	16436	309	16436	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTCCAGCCCTCCACC	NA	NA	NA	NA	NA	NA	NA	NA	60094994	60090223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896
ENSMUSG00000020538.16_60090297_60095116_1	chr11	-	2503	12	ISM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	16314	382	16314	-382	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGAGCCACCTTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	60095116	60090296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896
ENSMUSG00000020538.16_60090652_60096710_1	chr11	-	2480	15	ISM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	14720	737	14720	-737	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCTGGAAATTGCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	60096710	60090651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681
ENSMUSG00000020538.16_60090818_60096938_1	chr11	-	2542	15	ISM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	14492	903	14492	-903	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTACTGCTGGACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	60096938	60090817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681
ENSMUSG00000020538.16_60091289_60097136_1	chr11	-	2448	15	ISM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	14294	1374	14294	-1374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGAGGAGGAGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	60097136	60091288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998
ENSMUSG00000020538.16_60091498_60097333_1	chr11	-	2449	15	ISM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	14097	1583	14097	-1583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTGGCACAGAGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	60097333	60091497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220
ENSMUSG00000020538.16_60092192_60097812_1	chr11	-	2380	15	ISM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	13618	2277	13618	-2277	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGCTGGACCACAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	60097812	60092191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663
ENSMUSG00000020538.16_60092192_60097871_1	chr11	-	2439	15	ISM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	13559	2277	13559	-2277	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGCTGGACCACAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	60097871	60092191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663
ENSMUSG00000020538.16_60092405_60098014_1	chr11	-	2537	14	ISM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	13416	2490	13416	-2490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCCCCAGCCAGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	60098014	60092404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663
ENSMUSG00000020541.13_90537666_90563765_1	chr11	-	901	10	NIC	ENSMUSG00000020541.13	novel	1491	15	NA	NA	-9940	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGTAAGAGACACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	90563765	90537665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_-_90537726_90540173_90540250_90540611_90540688_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658
ENSMUSG00000020541.13_90537666_90563765_2	chr11	-	902	10	ISM	ENSMUSG00000020541.13	ENST00000445275.6	1491	15	14727	0	-9940	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGTAAGAGACACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	90563765	90537665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_90537726_90540173_90540241_90540601_90540688_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658
ENSMUSG00000020541.13_90537666_90564618_1	chr11	-	1029	11	ISM	ENSMUSG00000020541.13	ENST00000445275.6	1491	15	13874	0	-10793	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGTAAGAGACACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	90564618	90537665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_90537726_90540173_90540241_90540601_90540688_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489
ENSMUSG00000020541.13_90537666_90578407_1	chr11	-	1268	13	NIC	ENSMUSG00000020541.13	novel	4308	16	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	4658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGTAAGAGACACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	90578407	90537665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_-_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90578338
ENSMUSG00000020541.13_90537666_90578407_2	chr11	-	1269	13	FSM	ENSMUSG00000020541.13	ENST00000536554.5	1271	13	2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGTAAGAGACACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	90578407	90537665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_90537726_90540173_90540241_90540601_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90578338
ENSMUSG00000020541.13_90540174_90564618_1	chr11	-	968	10	NIC	ENSMUSG00000020541.13	novel	4308	16	NA	NA	-10793	-2508	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTCATTTATACAATTA	NA	NA	NA	NA	NA	NA	NA	NA	90564618	90540173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_-_90540250_90540611_90540688_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489
ENSMUSG00000020541.13_90540647_90565563_1	chr11	-	919	10	ISM	ENSMUSG00000020541.13	ENST00000445275.6	1491	15	12929	2981	-11738	-2981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGGCTGCCACCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	90565563	90540646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_90540688_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495
ENSMUSG00000020541.13_90547175_90574139_1	chr11	-	989	9	ISM	ENSMUSG00000020541.13	ENST00000575882.6	1435	15	4270	9509	4266	-9509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATATCAGTAATACCAG	NA	NA	NA	NA	NA	NA	NA	NA	90574139	90547174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060
ENSMUSG00000020541.13_90547175_90575972_1	chr11	-	1074	10	ISM	ENSMUSG00000020541.13	ENST00000575882.6	1435	15	2437	9509	2433	-9509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATATCAGTAATACCAG	NA	NA	NA	NA	NA	NA	NA	NA	90575972	90547174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887
ENSMUSG00000020541.13_90548538_90578407_1	chr11	-	1043	10	ISM	ENSMUSG00000020541.13	ENST00000575882.6	1435	15	2	10872	-2	-10872	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGCAACTGAACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	90578407	90548537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
ENSMUSG00000020541.13_90561948_90578407_1	chr11	-	685	7	FSM	ENSMUSG00000020541.13	ENST00000572405.5	745	7	20	40	-2	-40	multi-exon	FALSE	canonical	NA	NA	NA	NA	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCTCTGAAAACCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	90578407	90561947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575968_90578338
ENSMUSG00000020541.13_90563659_90578407_1	chr11	-	526	5	ISM	ENSMUSG00000020541.13	ENST00000348161.8	1390	14	42	25993	-2	-1751	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACAACAGTGACAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	90578407	90563658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90578338
ENSMUSG00000020541.13_90565577_90578405_1	chr11	-	279	4	ISM	ENSMUSG00000020541.13	ENST00000572158.5	1430	15	20	27911	0	-3669	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATACTCTAGTTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	90578405	90565576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_90565625_90574060_90574140_90575887_90575973_90578338
ENSMUSG00000020544.15_90529171_90534523_1	chr11	+	409	3	ISM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	172	1234	172	-964	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTACTGACAAACCAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	90529170	90534523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_90529379_90531202_90531359_90534478
ENSMUSG00000020544.15_90529314_90535260_1	chr11	+	412	4	FSM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	315	497	315	-227	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGATCCTGAATTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	90529313	90535260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195
ENSMUSG00000020547.6_36142166_36206720_1	chr12	-	1450	12	FSM	ENSMUSG00000020547.6	ENST00000433922.6	1854	12	83	321	83	-321	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGATAGGCGAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	36206720	36142165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206651
ENSMUSG00000020547.6_36142219_36206798_1	chr12	-	1475	12	FSM	ENSMUSG00000020547.6	ENST00000433922.6	1854	12	5	374	5	-374	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGCTGAAGCGTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	36206798	36142218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206651
ENSMUSG00000020549.15_64869900_64892426_1	chr11	+	2879	24	NNC	ENSMUSG00000020549.15	novel	2884	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTCAGTGTGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	64869899	64892426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883181_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ENSMUSG00000020549.15_64871433_64876447_1	chr11	+	368	5	ISM	ENSMUSG00000020549.15	ENST00000338034.9	2468	24	1503	15609	1503	-15609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTGGGCAAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	64871432	64876447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_64871499_64872442_64872501_64873581_64873651_64874419_64874546_64876398
ENSMUSG00000020549.15_64872442_64878155_1	chr11	+	362	5	ISM	ENSMUSG00000020549.15	ENST00000338034.9	2468	24	2512	13901	2512	-13901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTCAGGTCCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	64872441	64878155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_64872501_64873581_64873651_64874419_64874546_64876398_64876448_64878096
ENSMUSG00000020549.15_64873581_64878306_1	chr11	+	377	5	ISM	ENSMUSG00000020549.15	ENST00000338034.9	2468	24	3651	13750	3651	-13750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTCCTGGCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	64873580	64878306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_64873651_64874419_64874546_64876398_64876448_64878096_64878156_64878233
ENSMUSG00000020549.15_64874526_64880191_1	chr11	+	327	6	ISM	ENSMUSG00000020549.15	ENST00000338034.9	2468	24	4596	11865	4596	-11865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGCACCTGTGGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	64874525	64880191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_64874546_64876398_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178
ENSMUSG00000020549.15_64883101_64886198_1	chr11	+	354	4	ISM	ENSMUSG00000020549.15	ENSMUST00000108697.8	2612	24	13204	5956	13171	-5858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCAGTTCCACACTCG	NA	NA	NA	NA	NA	NA	NA	NA	64883100	64886198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_64883186_64883267_64883351_64885061_64885181_64886131
ENSMUSG00000020561.9_33479634_33491391_1	chr12	+	4318	4	NNC	ENSMUSG00000020561.9	novel	4325	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTGTACAGCGACAT	NA	NA	NA	NA	NA	NA	NA	NA	33479633	33491391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_33479908_33483503_33483639_33486934_33487144_33487691
ENSMUSG00000020561.9_33479634_33491391_2	chr12	+	4322	4	NNC	ENSMUSG00000020561.9	novel	4325	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTGTACAGCGACAT	NA	NA	NA	NA	NA	NA	NA	NA	33479633	33491391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_33479908_33483503_33483650_33486941_33487144_33487691
ENSMUSG00000020564.18_33197692_33300596_1	chr12	+	1144	4	FSM	ENSMUSG00000020564.18	ENSMUST00000110824.9	1675	4	-18	549	0	-549	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACAATGGTTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	33197691	33300596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_33197915_33198431_33198501_33267710_33267816_33299849
ENSMUSG00000020564.18_33197804_33300596_1	chr12	+	1032	4	FSM	ENSMUSG00000020564.18	ENSMUST00000110824.9	1675	4	94	549	0	-549	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACAATGGTTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	33197803	33300596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_33197915_33198431_33198501_33267710_33267816_33299849
ENSMUSG00000020564.18_33198432_33300782_1	chr12	+	1107	3	ISM	ENSMUSG00000020564.18	ENSMUST00000110824.9	1675	4	722	363	628	-363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAAGTTCTGTGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	33198431	33300782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_33198501_33267710_33267816_33299849
ENSMUSG00000020564.18_33364288_33391975_1	chr12	+	382	3	ISM	ENSMUSG00000020564.18	ENST00000477775.5	2336	10	6	30950	0	13127	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCCAATGTCAAAATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	33364287	33391975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_33364391_33375909_33376133_33391919
ENSMUSG00000020564.18_33375934_33392123_1	chr12	+	403	2	ISM	ENSMUSG00000020564.18	ENSMUST00000154742.2	3548	9	10538	30233	10538	13275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGCCACCATAGACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	33375933	33392123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_33376133_33391919
ENSMUSG00000020564.18_33376059_33394940_1	chr12	+	401	3	ISM	ENSMUSG00000020564.18	ENSMUST00000154742.2	3548	9	10663	27416	10663	16092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCTTGCACAAGATCCC	NA	NA	NA	NA	NA	NA	NA	NA	33376058	33394940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_33376133_33391919_33392195_33394888
ENSMUSG00000020564.18_33392171_33408694_1	chr12	+	398	4	ISM	ENSMUSG00000020564.18	ENSMUST00000154742.2	3548	9	26775	13662	26775	-9578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACAGCGGCTACACTCC	NA	NA	NA	NA	NA	NA	NA	NA	33392170	33408694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_33392195_33394888_33394972_33395836_33396088_33408654
ENSMUSG00000020564.18_33395899_33413004_1	chr12	+	415	3	ISM	ENSMUSG00000020564.18	ENSMUST00000154742.2	3548	9	30503	9352	30503	-5268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATACTATGTGTTTGATAG	NA	NA	NA	NA	NA	NA	NA	NA	33395898	33413004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_33396088_33408654_33408848_33412971
ENSMUSG00000020564.18_33396037_33417002_1	chr12	+	398	4	ISM	ENSMUSG00000020564.18	ENSMUST00000154742.2	3548	9	30641	5354	30641	-1270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGCCAGCAGCCCACATC	NA	NA	NA	NA	NA	NA	NA	NA	33396036	33417002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_33396088_33408654_33408848_33412971_33413094_33416970
ENSMUSG00000020564.18_33408726_33417120_1	chr12	+	394	3	ISM	ENSMUSG00000020564.18	ENSMUST00000154742.2	3548	9	43330	5236	43330	-1152	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGACATCAGCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	33408725	33417120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_33408848_33412971_33413094_33416970
ENSMUSG00000020564.18_33408777_33417179_1	chr12	+	402	3	ISM	ENSMUSG00000020564.18	ENSMUST00000154742.2	3548	9	43381	5177	43381	-1093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCATGTCCCACACCACA	NA	NA	NA	NA	NA	NA	NA	NA	33408776	33417179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_33408848_33412971_33413094_33416970
ENSMUSG00000020564.18_33413061_33417339_1	chr12	+	402	2	ISM	ENSMUSG00000020564.18	ENSMUST00000154742.2	3548	9	47665	5017	47665	-933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGACCTGTCCGCTCGTA	NA	NA	NA	NA	NA	NA	NA	NA	33413060	33417339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_33413094_33416970
ENSMUSG00000020564.18_33417579_33422892_1	chr12	+	439	3	ISM	ENSMUSG00000020564.18	ENST00000477775.5	2336	10	53297	33	52183	-33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTTCCCTAACAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	33417578	33422892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_33417914_33420981_33421057_33422863
ENSMUSG00000020564.18_33417663_33422927_1	chr12	+	390	3	ISM	ENSMUSG00000020564.18	ENST00000477775.5	2336	10	53381	-2	52267	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTCTGCTTGTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	33417662	33422927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_33417914_33420981_33421057_33422863
ENSMUSG00000020570.16_33004246_33015474_1	chr12	+	216	2	ISM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	63	11429	63	-11429	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTACTTTTGGTTATCCA	NA	NA	NA	NA	NA	NA	NA	NA	33004245	33015474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_33004359_33015371
ENSMUSG00000020570.16_33017578_33024169_1	chr12	+	208	2	ISM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	13395	2734	13395	-2734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTCAGCCTGGGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	33017577	33024169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_33017743_33024126
ENSMUSG00000020570.16_33017633_33024219_1	chr12	+	203	2	ISM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	13450	2684	13450	-2684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAATTGTGGAGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	33017632	33024219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_33017743_33024126
ENSMUSG00000020570.16_33017685_33024269_1	chr12	+	201	2	ISM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	13502	2634	13502	-2634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTACTTTGTCTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	33017684	33024269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_33017743_33024126
ENSMUSG00000020571.14_17320396_17330640_1	chr12	+	980	9	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	3800	4131	3800	-4131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1833	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTCCGAAGCCCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	17320395	17330640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567
ENSMUSG00000020571.14_17320503_17328557_1	chr12	+	371	5	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	3907	6214	3907	-6214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATGACACCTTTGATAAG	NA	NA	NA	NA	NA	NA	NA	NA	17320502	17328557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514
ENSMUSG00000020571.14_17324447_17328941_1	chr12	+	408	4	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	7851	5830	7851	-5830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGATACGGGGTGAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	17324446	17328941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17324512_17327198_17327306_17328514_17328646_17328836
ENSMUSG00000020571.14_17327242_17329651_1	chr12	+	382	4	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	10646	5120	10646	-5120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCTGACATAGTGTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	17327241	17329651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17327306_17328514_17328646_17328836_17328952_17329579
ENSMUSG00000020571.14_17327242_17333985_1	chr12	+	912	9	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	10646	786	10646	-786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAGGATGAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	17327241	17333985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ENSMUSG00000020571.14_17328512_17334096_1	chr12	+	962	8	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	11916	675	11916	-675	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1663	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCAGCACATGCGG	NA	NA	NA	NA	NA	NA	NA	NA	17328511	17334096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ENSMUSG00000020571.14_17328837_17330640_1	chr12	+	414	4	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	12241	4131	12241	-4131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTCCGAAGCCCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	17328836	17330640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17328952_17329579_17329721_17330378_17330464_17330567
ENSMUSG00000020571.14_17329579_17330975_1	chr12	+	364	4	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	12983	3796	12983	-3796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTACCCTGCCATGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	17329578	17330975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17329721_17330378_17330464_17330567_17330641_17330911
ENSMUSG00000020571.14_17329616_17334332_1	chr12	+	913	6	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	13020	439	13020	-439	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1722	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTTTTTCCATTAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	17329615	17334332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ENSMUSG00000020571.14_17330377_17333297_1	chr12	+	416	4	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	13781	1474	13781	-1474	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAGATCAAGGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	17330376	17333297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17330464_17330567_17330641_17330911_17331071_17333200
ENSMUSG00000020571.14_17330413_17334464_1	chr12	+	906	5	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	13817	307	13817	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2008	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCCACCTTCCTGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	17330412	17334464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ENSMUSG00000020571.14_17333199_17334771_1	chr12	+	932	2	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	16603	0	16603	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTCTGTGATTATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	17333198	17334771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17333298_17333938
ENSMUSG00000020572.9_32870507_32888456_1	chr12	+	668	5	ISM	ENSMUSG00000020572.9	ENST00000679951.1	2497	10	25	13151	3	-2895	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGAACCAGATGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	32870506	32888456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297
ENSMUSG00000020572.9_32870507_32891351_1	chr12	+	972	5	FSM	ENSMUSG00000020572.9	ENST00000491027.6	975	5	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGCTTAAGACTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	32870506	32891351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_32870626_32884900_32885030_32888297_32888457_32889149_32889287_32890923
ENSMUSG00000020572.9_32880298_32890959_1	chr12	+	590	6	ISM	ENSMUSG00000020572.9	ENST00000679951.1	2497	10	9816	10648	9794	-392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTTGAACACATAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	32880297	32890959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923
ENSMUSG00000020572.9_32883070_32891016_1	chr12	+	583	5	ISM	ENSMUSG00000020572.9	ENST00000679951.1	2497	10	12588	10591	12566	-335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTATGACATTTATAATG	NA	NA	NA	NA	NA	NA	NA	NA	32883069	32891016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923
ENSMUSG00000020572.9_32883109_32891079_1	chr12	+	607	5	ISM	ENSMUSG00000020572.9	ENST00000679951.1	2497	10	12627	10528	12605	-272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGAGAAGTACAGAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	32883108	32891079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923
ENSMUSG00000020572.9_32888394_32898669_1	chr12	+	600	5	ISM	ENSMUSG00000020572.9	ENST00000679951.1	2497	10	17912	2938	17890	-2938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTATCTTTACATAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	32888393	32898669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32898615
ENSMUSG00000020572.9_32889225_32900504_1	chr12	+	626	5	ISM	ENSMUSG00000020572.9	ENST00000679951.1	2497	10	18743	1103	18721	-1103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCGAGCAGGACGTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	32889224	32900504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_32889287_32890923_32891150_32892683_32892804_32898615_32898751_32900421
ENSMUSG00000020572.9_32891035_32898721_1	chr12	+	482	4	ISM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	20701	4627	20531	-2886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGAGACCTTGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	32891034	32898721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_32891150_32892683_32892804_32896704_32896846_32898615
ENSMUSG00000020572.9_32891043_32900657_1	chr12	+	598	4	ISM	ENSMUSG00000020572.9	ENST00000679951.1	2497	10	20561	950	20539	-950	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCAGATTATTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	32891042	32900657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_32891150_32892683_32892804_32898615_32898751_32900421
ENSMUSG00000020572.9_32892682_32900484_1	chr12	+	461	4	ISM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	22348	2864	22178	-1123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAATGCACAGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	32892681	32900484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_32892804_32896704_32896846_32898615_32898751_32900421
ENSMUSG00000020572.9_32892729_32900541_1	chr12	+	471	4	ISM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	22395	2807	22225	-1066	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGTTGTTATGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	32892728	32900541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_32892804_32896704_32896846_32898615_32898751_32900421
ENSMUSG00000020572.9_32892737_32900806_1	chr12	+	587	3	ISM	ENSMUSG00000020572.9	ENST00000679951.1	2497	10	22255	801	22233	-801	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAATCTGGTGTTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	32892736	32900806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_32892804_32898615_32898751_32900421
ENSMUSG00000020572.9_32892784_32900865_1	chr12	+	599	3	ISM	ENSMUSG00000020572.9	ENST00000679951.1	2497	10	22302	742	22280	-742	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGATCACATAAAACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	32892783	32900865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_32892804_32898615_32898751_32900421
ENSMUSG00000020572.9_32898668_32901001_1	chr12	+	663	2	ISM	ENSMUSG00000020572.9	ENST00000679951.1	2497	10	28186	606	28164	-606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGATTTTTATGAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	32898667	32901001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_32898751_32900421
ENSMUSG00000020573.18_32226387_32250899_1	chr12	-	1504	9	ISM	ENSMUSG00000020573.18	ENST00000440650.6	3582	11	7770	0	5086	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAGTGCGAGGCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	32250899	32226386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_32226856_32242078_32242237_32243597_32243710_32244692_32244824_32245617_32245709_32247183_32247331_32249086_32249191_32250498_32250725_32250833
ENSMUSG00000020573.18_32226577_32254126_1	chr12	-	1450	10	ISM	ENSMUSG00000020573.18	ENST00000440650.6	3582	11	4543	190	1859	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGCTAGGGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	32254126	32226576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_32226856_32242078_32242237_32243597_32243710_32244692_32244824_32245617_32245709_32247183_32247331_32249086_32249191_32250498_32250725_32250833_32250900_32253990
ENSMUSG00000020573.18_32226763_32254324_1	chr12	-	1462	10	ISM	ENSMUSG00000020573.18	ENST00000440650.6	3582	11	4345	376	1661	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACAAGCAAAGAGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	32254324	32226762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_32226856_32242078_32242237_32243597_32243710_32244692_32244824_32245617_32245709_32247183_32247331_32249086_32249191_32250498_32250725_32250833_32250900_32253990
ENSMUSG00000020573.18_32242131_32254478_1	chr12	-	1471	9	ISM	ENSMUSG00000020573.18	ENSMUST00000217915.2	3340	11	1507	15554	1507	-15554	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGGGATCTTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	32254478	32242130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_32242237_32243597_32243710_32244692_32244824_32245617_32245709_32247183_32247331_32249086_32249191_32250498_32250725_32250833_32250900_32253990
ENSMUSG00000020573.18_32242181_32254535_1	chr12	-	1478	9	ISM	ENSMUSG00000020573.18	ENSMUST00000217915.2	3340	11	1450	15604	1450	-15604	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCATCAATAAAGAGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	32254535	32242180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_32242237_32243597_32243710_32244692_32244824_32245617_32245709_32247183_32247331_32249086_32249191_32250498_32250725_32250833_32250900_32253990
ENSMUSG00000020573.18_32244791_32254788_1	chr12	-	1465	7	ISM	ENSMUSG00000020573.18	ENSMUST00000217915.2	3340	11	1197	18214	1197	-18214	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCAAATTCAGCAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	32254788	32244790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_32244824_32245617_32245709_32247183_32247331_32249086_32249191_32250498_32250725_32250833_32250900_32253990
ENSMUSG00000020573.18_32247201_32254953_1	chr12	-	1489	5	ISM	ENSMUSG00000020573.18	ENSMUST00000217915.2	3340	11	1032	20624	1032	-20624	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTTGATCTTGCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	32254953	32247200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_32247331_32249086_32249191_32250498_32250725_32250833_32250900_32253990
ENSMUSG00000020573.18_32249174_32255158_1	chr12	-	1477	4	ISM	ENSMUSG00000020573.18	ENSMUST00000217915.2	3340	11	827	22597	827	-22597	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGCTTGAAAGCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	32255158	32249173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_32249191_32250498_32250725_32250833_32250900_32253990
ENSMUSG00000020573.18_32250550_32255284_1	chr12	-	1535	3	ISM	ENSMUSG00000020573.18	ENSMUST00000217915.2	3340	11	701	23973	701	-23973	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTGATATTAAATCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	32255284	32250549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_32250725_32250833_32250900_32253990
ENSMUSG00000020573.18_32250670_32255363_1	chr12	-	1494	3	ISM	ENSMUSG00000020573.18	ENSMUST00000217915.2	3340	11	622	24093	622	-24093	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGACACTATCAGCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	32255363	32250669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_32250725_32250833_32250900_32253990
ENSMUSG00000020573.18_32254555_32258658_1	chr12	-	1503	2	ISM	ENSMUSG00000020573.18	ENST00000440650.6	3582	11	11	28168	0	-27978	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACTATGTGCTCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	32258658	32254554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_32255998_32258598
ENSMUSG00000020580.11_16945005_17035687_1	chr12	+	5386	32	NIC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	109	-2137	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTACCTTAGATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	16945004	17035687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004969_17007226_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ENSMUSG00000020580.11_17000638_17036774_1	chr12	+	5354	26	NIC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	55742	-1050	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAATTCCAAGTAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	17000637	17036774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr12_+_17000712_17002496_17002589_17003261_17003422_17004907_17004969_17007226_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ENSMUSG00000020580.11_17008647_17037542_1	chr12	+	5360	18	ISM	ENSMUSG00000020580.11	ENSMUST00000020904.8	7644	33	63751	282	63751	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTAAAGCACTTTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	17008646	17037542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ENSMUSG00000020580.11_17008789_17037824_1	chr12	+	5500	18	ISM	ENSMUSG00000020580.11	ENSMUST00000020904.8	7644	33	63893	0	63893	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGTGAAATAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	17008788	17037824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ENSMUSG00000020585.5_8971664_8986795_1	chr12	+	1147	6	ISM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	0	1947	0	-1947	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAACTACTGTTCTACTCA	NA	NA	NA	NA	NA	NA	NA	NA	8971663	8986795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696
ENSMUSG00000020585.5_8971794_8988185_1	chr12	+	1079	7	NNC	ENSMUSG00000020585.5	novel	1773	7	NA	NA	130	-557	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGGACATTCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	8971793	8988185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_8972295_8981627_8981749_8984695_8984773_8984872_8984989_8985986_8986083_8986696_8986796_8988116
ENSMUSG00000020585.5_8972028_8988410_1	chr12	+	1077	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	364	332	364	-332	multi-exon	FALSE	canonical	NA	NA	NA	NA	1496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTGCCATTGTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	8972027	8988410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ENSMUSG00000020585.5_8972149_8988582_1	chr12	+	1128	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	485	160	485	-160	multi-exon	FALSE	canonical	NA	NA	NA	NA	1930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACCTGCAGTTTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	8972148	8988582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ENSMUSG00000020585.5_8981627_8988742_1	chr12	+	1143	6	ISM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	9963	0	9963	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTCATGTTTATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	8981626	8988742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ENSMUSG00000020590.17_35150626_35195822_1	chr12	+	3436	17	ISM	ENSMUSG00000020590.17	ENSMUST00000048519.17	6231	26	53441	1656	53441	-1656	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTCAGATCCTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	35150625	35195822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ENSMUSG00000020590.17_35182113_35197058_1	chr12	+	3440	6	ISM	ENSMUSG00000020590.17	ENSMUST00000048519.17	6231	26	84928	420	84928	-420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAATTGTATAATAACTAC	NA	NA	NA	NA	NA	NA	NA	NA	35182112	35197058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ENSMUSG00000020590.17_35190179_35197478_1	chr12	+	3492	2	ISM	ENSMUSG00000020590.17	ENSMUST00000048519.17	6231	26	92994	0	92994	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTGTTTACTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	35190178	35197478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_35190280_35194087
ENSMUSG00000020591.12_16703860_16706797_1	chr12	+	465	2	ISM	ENSMUSG00000020591.12	ENSMUST00000220892.2	846	4	359	2950	359	-2950	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCAAGCCAGCCTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	16703859	16706797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_16704125_16706597
ENSMUSG00000020591.12_16704025_16708431_1	chr12	+	440	3	ISM	ENSMUSG00000020591.12	ENST00000306928.6	1325	4	585	1553	524	-1316	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCCGATGATGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	16704024	16708431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_16704125_16706597_16706872_16708365
ENSMUSG00000020591.12_16704094_16709747_1	chr12	+	434	4	FSM	ENSMUSG00000020591.12	ENSMUST00000111064.3	1524	4	609	481	593	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACACGCTCTTCTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	16704093	16709747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_16704125_16706597_16706872_16708365_16708457_16709709
ENSMUSG00000020591.12_16706703_16709929_1	chr12	+	480	3	ISM	ENSMUSG00000020591.12	ENSMUST00000111064.3	1524	4	3218	299	3202	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCCCCAAGAAACCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	16706702	16709929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_16706872_16708365_16708457_16709709
ENSMUSG00000020592.15_8821579_8840523_1	chr12	+	344	3	ISM	ENSMUSG00000020592.15	ENSMUST00000171158.8	2311	6	166	2539	166	-2539	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCCGAGGAGGGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	8821578	8840523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8821702_8839406_8839489_8840384
ENSMUSG00000020592.15_8821633_8840597_1	chr12	+	364	3	ISM	ENSMUSG00000020592.15	ENSMUST00000171158.8	2311	6	220	2465	220	-2465	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCACCACCAGGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	8821632	8840597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8821702_8839406_8839489_8840384
ENSMUSG00000020592.15_8840539_8841331_1	chr12	+	369	2	ISM	ENSMUSG00000020592.15	ENSMUST00000171158.8	2311	6	19126	1731	19126	-1731	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGTAGAGCCCGGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	8840538	8841331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8840867_8841290
ENSMUSG00000020592.15_8840686_8841688_1	chr12	+	368	3	ISM	ENSMUSG00000020592.15	ENSMUST00000171158.8	2311	6	19273	1374	19273	-1374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCTGTACCGGATG	NA	NA	NA	NA	NA	NA	NA	NA	8840685	8841688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8840867_8841290_8841427_8841637
ENSMUSG00000020592.15_8840732_8841745_1	chr12	+	379	3	ISM	ENSMUSG00000020592.15	ENSMUST00000171158.8	2311	6	19319	1317	19319	-1317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACAAGCCAATGGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	8840731	8841745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8840867_8841290_8841427_8841637
ENSMUSG00000020592.15_8840802_8841803_1	chr12	+	367	3	ISM	ENSMUSG00000020592.15	ENSMUST00000171158.8	2311	6	19389	1259	19389	-1259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGGGAAATAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	8840801	8841803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8840867_8841290_8841427_8841637
ENSMUSG00000020592.15_8841315_8841910_1	chr12	+	385	2	ISM	ENSMUSG00000020592.15	ENSMUST00000171158.8	2311	6	19902	1152	19902	-1152	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCCTCTGCACCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	8841314	8841910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8841427_8841637
ENSMUSG00000020592.15_8841372_8841958_1	chr12	+	376	2	ISM	ENSMUSG00000020592.15	ENSMUST00000171158.8	2311	6	19959	1104	19959	-1104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTGTGCTGGGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	8841371	8841958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8841427_8841637
ENSMUSG00000020598.17_44596748_44606513_1	chr12	+	295	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	17501	40989	17501	-39111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGCGGTTTATCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	44596747	44606513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44596842_44598087_44598220_44606444
ENSMUSG00000020598.17_44606484_44610822_1	chr12	+	293	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	27237	36680	27237	-34802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGCCCAAAAGGATAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	44606483	44610822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44606589_44609209_44609322_44610746
ENSMUSG00000020598.17_44609201_44611023_1	chr12	+	302	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	29954	36479	29954	-34601	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAACAACCTGAGTATGC	NA	NA	NA	NA	NA	NA	NA	NA	44609200	44611023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44609322_44610746_44610914_44611009
ENSMUSG00000020598.17_44610771_44613085_1	chr12	+	306	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	31524	34417	31524	-32539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCATCTGGTGGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	44610770	44613085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44610914_44611009_44611158_44613070
ENSMUSG00000020598.17_44610828_44613132_1	chr12	+	296	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	31581	34370	31581	-32492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTGTACGGCCAACACA	NA	NA	NA	NA	NA	NA	NA	NA	44610827	44613132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44610914_44611009_44611158_44613070
ENSMUSG00000020598.17_44610875_44613188_1	chr12	+	305	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	31628	34314	31628	-32436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCGGTAAGGGCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	44610874	44613188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44610914_44611009_44611158_44613070
ENSMUSG00000020598.17_44613109_44617089_1	chr12	+	286	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	33862	30413	33862	-28535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCTATGTGAACTACT	NA	NA	NA	NA	NA	NA	NA	NA	44613108	44617089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44613196_44615326_44615429_44616992
ENSMUSG00000020598.17_44613166_44617147_1	chr12	+	287	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	33919	30355	33919	-28477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCGAGCGAGGCATCCGA	NA	NA	NA	NA	NA	NA	NA	NA	44613165	44617147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44613196_44615326_44615429_44616992
ENSMUSG00000020598.17_44617018_44618355_1	chr12	+	302	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	37771	29147	37771	-27269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGATGGTGACGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	44617017	44618355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44617191_44617288_44617360_44618297
ENSMUSG00000020598.17_44617077_44618405_1	chr12	+	293	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	37830	29097	37830	-27219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATTGTTTCTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	44617076	44618405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44617191_44617288_44617360_44618297
ENSMUSG00000020598.17_44617135_44618450_1	chr12	+	280	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	37888	29052	37888	-27174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTCAAGCTCTGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	44617134	44618450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44617191_44617288_44617360_44618297
ENSMUSG00000020598.17_44618371_44620628_1	chr12	+	295	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	39124	26874	39124	-24996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTAAAAGAAACAGGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	44618370	44620628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44618524_44618984_44619101_44620602
ENSMUSG00000020598.17_44618418_44620683_1	chr12	+	303	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	39171	26819	39171	-24941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTCACGGCATGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	44618417	44620683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44618524_44618984_44619101_44620602
ENSMUSG00000020598.17_44618485_44620730_1	chr12	+	283	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	39238	26772	39238	-24894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAACGTCCGAGTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	44618484	44620730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44618524_44618984_44619101_44620602
ENSMUSG00000020598.17_44619039_44622699_1	chr12	+	308	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	39792	24803	39792	-22925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTCCCTCACTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	44619038	44622699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44619101_44620602_44620808_44622658
ENSMUSG00000020598.17_44622738_44636940_1	chr12	+	271	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	43491	10562	43491	-8684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATGTGCGCTGTTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	44622737	44636940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44622782_44623386_44623564_44636890
ENSMUSG00000020598.17_44636941_44645257_1	chr12	+	286	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	57694	2245	57694	-367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGCTCCTTTATTGGC	NA	NA	NA	NA	NA	NA	NA	NA	44636940	44645257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44637023_44637763_44637843_44645132
ENSMUSG00000020598.17_44636986_44645317_1	chr12	+	301	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	57739	2185	57739	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAAGCTCAGAGGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	44636985	44645317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_44637023_44637763_44637843_44645132
ENSMUSG00000020599.14_109116187_109138910_1	chr11	-	1463	8	ISM	ENSMUSG00000020599.14	ENSMUST00000103062.9	1743	10	2067	0	2067	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTCTTGGACTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	109138910	109116186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109116603_109117951_109118431_109126725_109126844_109128919_109129006_109130279_109130419_109131675_109131764_109137278_109137395_109138889
ENSMUSG00000020599.14_109116376_109139866_1	chr11	-	1429	9	ISM	ENSMUSG00000020599.14	ENSMUST00000103062.9	1743	10	1111	189	1111	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGTGCATTAGGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	109139866	109116375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109116603_109117951_109118431_109126725_109126844_109128919_109129006_109130279_109130419_109131675_109131764_109137278_109137395_109138889_109139004_109139804
ENSMUSG00000020599.14_109118165_109159773_1	chr11	-	1102	10	ISM	ENSMUSG00000020599.14	ENST00000443584.7	1996	17	29138	246	-18796	-246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTCTGCAGACCACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	109159773	109118164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109118431_109126725_109126844_109128919_109129006_109130279_109130419_109131675_109131764_109137278_109137395_109138889_109139004_109139804_109139883_109150652_109150725_109159748
ENSMUSG00000020599.14_109118328_109172329_1	chr11	-	1411	17	ISM	ENSMUSG00000020599.14	ENST00000262406.10	2402	19	16601	2131	16563	-409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGCCCTTTGCTTCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	109172329	109118327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109118431_109126725_109126844_109128919_109129006_109130279_109130419_109131675_109131764_109137278_109137395_109138889_109139004_109139804_109139867_109140852_109140883_109150652_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274
ENSMUSG00000020599.14_109118395_109166452_1	chr11	-	1113	13	ISM	ENSMUSG00000020599.14	ENST00000443584.7	1996	17	22459	476	22440	-476	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATACAGGGACCTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	109166452	109118394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109118431_109126725_109126844_109128919_109129006_109130279_109130419_109131675_109131764_109137278_109137395_109138889_109139004_109139804_109139883_109150652_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404
ENSMUSG00000020599.14_109126726_109166753_1	chr11	-	1189	13	ISM	ENSMUSG00000020599.14	ENST00000443584.7	1996	17	22158	8807	22139	-843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGAGCAAGCTGGACCG	NA	NA	NA	NA	NA	NA	NA	NA	109166753	109126725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109126844_109128919_109129006_109130279_109130419_109131675_109131764_109137278_109137395_109138889_109139004_109139804_109139883_109150652_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645
ENSMUSG00000020599.14_109126726_109188892_1	chr11	-	1479	17	ISM	ENSMUSG00000020599.14	ENST00000262406.10	2402	19	38	10529	0	-843	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGAGCAAGCTGGACCG	NA	NA	NA	NA	NA	NA	NA	NA	109188892	109126725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109126844_109128919_109129006_109130279_109130419_109131675_109131764_109137278_109137395_109138889_109139004_109139804_109139867_109140852_109140883_109150652_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274_109172372_109188763
ENSMUSG00000020599.14_109128985_109172297_1	chr11	-	1079	14	ISM	ENSMUSG00000020599.14	ENST00000443584.7	1996	17	16614	11066	16595	-3102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTCCAATCTATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	109172297	109128984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109129006_109130279_109130419_109131675_109131764_109137278_109137395_109138889_109139004_109139804_109139883_109150652_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274
ENSMUSG00000020599.14_109130337_109188892_1	chr11	-	1204	14	ISM	ENSMUSG00000020599.14	ENST00000443584.7	1996	17	19	12418	0	-4454	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACCGCTATGTACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	109188892	109130336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109130419_109131675_109131764_109137278_109137395_109138889_109139004_109139804_109139883_109150652_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274_109172372_109188763
ENSMUSG00000020605.10_8363432_8392695_1	chr12	+	1830	7	FSM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	0	1129	0	-1129	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGATGTGGCTTTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	8363431	8392695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_8363498_8367784_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
ENSMUSG00000020605.10_8367882_8392797_1	chr12	+	1769	6	ISM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	4450	1027	4450	-1027	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTCAGCCTTTCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	8367881	8392797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
ENSMUSG00000020605.10_8367936_8392846_1	chr12	+	1764	6	ISM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	4504	978	4504	-978	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCCTGTGCCTTCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	8367935	8392846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
ENSMUSG00000020605.10_8371663_8392992_1	chr12	+	1751	5	ISM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	8231	832	8231	-832	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACAGAGGCATTAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	8371662	8392992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
ENSMUSG00000020605.10_8373988_8393225_1	chr12	+	1802	4	ISM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	10556	599	10556	-599	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGATACTCTGCTCTCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	8373987	8393225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8374102_8386237_8386396_8387632_8387769_8391831
ENSMUSG00000020605.10_8374070_8393256_1	chr12	+	1751	4	ISM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	10638	568	10638	-568	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTGAGGACTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	8374069	8393256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8374102_8386237_8386396_8387632_8387769_8391831
ENSMUSG00000020605.10_8386301_8393380_1	chr12	+	1780	3	ISM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	22869	444	22869	-444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGCGGAGGAAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	8386300	8393380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8386396_8387632_8387769_8391831
ENSMUSG00000020605.10_8387731_8393558_1	chr12	+	1765	2	ISM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	24299	266	24299	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTGTGTAGGAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	8387730	8393558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8387769_8391831
ENSMUSG00000020608.8_11315887_11340057_1	chr12	+	1772	13	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	0	29729	0	2402	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTCTCCCCTGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	11315886	11340057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892
ENSMUSG00000020608.8_11316170_11336525_1	chr12	+	2203	10	FSM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	40	1130	40	-1130	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGGAGTACAGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	11316169	11336525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
ENSMUSG00000020608.8_11316170_11341543_1	chr12	+	1685	15	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	283	28243	40	3888	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGACCCTGAACTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	11316169	11341543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526
ENSMUSG00000020608.8_11316202_11336575_1	chr12	+	2221	10	FSM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	72	1080	72	-1080	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAACACTGGTGCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	11316201	11336575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
ENSMUSG00000020608.8_11316202_11341660_1	chr12	+	1770	15	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	315	28126	72	4005	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGGGACCTCTCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	11316201	11341660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526
ENSMUSG00000020608.8_11321804_11336754_1	chr12	+	2238	9	ISM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	5674	901	5674	-901	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTTATTTTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	11321803	11336754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
ENSMUSG00000020608.8_11321852_11344539_1	chr12	+	1685	15	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	5965	25247	5722	6884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTTGTGGCAAACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	11321851	11344539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485
ENSMUSG00000020608.8_11324082_11336860_1	chr12	+	2188	8	ISM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	7952	795	7952	-795	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATGCTATCCCAAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	11324081	11336860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
ENSMUSG00000020608.8_11326261_11345084_1	chr12	+	1768	14	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	10374	24702	10131	7429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATTAAGTGCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	11326260	11345084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923
ENSMUSG00000020608.8_11326333_11336983_1	chr12	+	2208	7	ISM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	10203	672	10203	-672	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTGTCTTCAGACACTC	NA	NA	NA	NA	NA	NA	NA	NA	11326332	11336983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
ENSMUSG00000020608.8_11329690_11337097_1	chr12	+	2204	6	ISM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	13560	558	13560	-558	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTCAATGTTTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	11329689	11337097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
ENSMUSG00000020608.8_11330340_11348343_1	chr12	+	1744	14	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	14453	21443	14210	10688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATACTTTTCTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	11330339	11348343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262
ENSMUSG00000020608.8_11332411_11349313_1	chr12	+	1684	14	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	16524	20473	16281	11658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAACAACAAAAAGAAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	11332410	11349313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259
ENSMUSG00000020608.8_11333072_11349421_1	chr12	+	1761	13	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	17185	20365	16942	11766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACTTAAGGTATTATATAA	NA	NA	NA	NA	NA	NA	NA	NA	11333071	11349421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259
ENSMUSG00000020608.8_11335145_11337428_1	chr12	+	2191	2	ISM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	19015	227	19015	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAACAAAGTCTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	11335144	11337428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11335219_11335311
ENSMUSG00000020608.8_11335191_11337486_1	chr12	+	2203	2	ISM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	19061	169	19061	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTATAATTCACTCTACAT	NA	NA	NA	NA	NA	NA	NA	NA	11335190	11337486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11335219_11335311
ENSMUSG00000020608.8_11335340_11351558_1	chr12	+	1694	13	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	19453	18228	19210	13903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGGATAGAAGTAAAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	11335339	11351558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522
ENSMUSG00000020608.8_11339214_11356108_1	chr12	+	1678	13	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	23327	13678	23084	-13678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATCTGGATAATAAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	11339213	11356108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078
ENSMUSG00000020608.8_11339982_11364668_1	chr12	+	1701	13	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	24095	5118	23852	-5118	internal_fragment	TRUE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCTCTTTCTCCACCGTG	NA	NA	NA	NA	NA	NA	NA	NA	11339981	11364668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607
ENSMUSG00000020608.8_11340770_11366678_1	chr12	+	1720	13	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	24883	3108	24640	-3108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGACAATTTATCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	11340769	11366678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619
ENSMUSG00000020608.8_11341599_11367870_1	chr12	+	1664	13	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	25712	1916	25469	-1916	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTGCAAGTTGACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	11341598	11367870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ENSMUSG00000020608.8_11344524_11368044_1	chr12	+	1667	12	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	28637	1742	28394	-1742	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAATTTCATAATACT	NA	NA	NA	NA	NA	NA	NA	NA	11344523	11368044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ENSMUSG00000020608.8_11345017_11368249_1	chr12	+	1702	11	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	29130	1537	28887	-1537	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTTTCCAGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	11345016	11368249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ENSMUSG00000020608.8_11348262_11368482_1	chr12	+	1732	9	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	32375	1304	32132	-1304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTAACCCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	11348261	11368482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ENSMUSG00000020608.8_11349339_11368603_1	chr12	+	1692	8	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	33452	1183	33209	-1183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAAGTGCTTTCTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	11349338	11368603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ENSMUSG00000020608.8_11350657_11368762_1	chr12	+	1674	7	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	34770	1024	34527	-1024	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAGTTCAAGGCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	11350656	11368762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ENSMUSG00000020608.8_11356079_11368945_1	chr12	+	1658	5	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	40192	841	39949	-841	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTACACCCTGAACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	11356078	11368945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ENSMUSG00000020608.8_11356121_11369014_1	chr12	+	1685	5	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	40234	772	39991	-772	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGTGAATTTAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	11356120	11369014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ENSMUSG00000020608.8_11356163_11369077_1	chr12	+	1706	5	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	40276	709	40033	-709	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTAGGGTTAGGACTAGC	NA	NA	NA	NA	NA	NA	NA	NA	11356162	11369077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ENSMUSG00000020608.8_11359287_11369195_1	chr12	+	1695	4	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	43400	591	43157	-591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTATTTTTAAAAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	11359286	11369195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11359306_11364607_11364761_11366619_11366718_11367770
ENSMUSG00000020608.8_11364705_11369309_1	chr12	+	1693	3	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	48818	477	48575	-477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCTACTCTAAGAATATA	NA	NA	NA	NA	NA	NA	NA	NA	11364704	11369309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11364761_11366619_11366718_11367770
ENSMUSG00000020608.8_11366675_11369470_1	chr12	+	1743	2	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	50788	316	50545	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGTTTGAGTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	11366674	11369470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_11366718_11367770
ENSMUSG00000020610.18_109319638_109325580_1	chr11	+	911	5	NNC	ENSMUSG00000020610.18	novel	931	5	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAGTGGGACGGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	109319637	109325580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_109319903_109320489_109320668_109320749_109320879_109324715_109324880_109325405
ENSMUSG00000020610.18_109319638_109325582_1	chr11	+	917	5	ISM	ENSMUSG00000020610.18	ENSMUST00000103061.3	1832	8	2586	2233	10	2	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGGACGGGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	109319637	109325582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405
ENSMUSG00000020610.18_109319703_109324779_1	chr11	+	401	3	ISM	ENSMUSG00000020610.18	ENST00000359783.8	753	4	77	801	75	-801	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACGTCTCTGCAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	109319702	109324779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_109319911_109320749_109320879_109324715
ENSMUSG00000020610.18_109319719_109325580_1	chr11	+	829	5	NNC	ENSMUSG00000020610.18	novel	931	5	NA	NA	91	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAGTGGGACGGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	109319718	109325580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_109319911_109320489_109320664_109320749_109320879_109324715_109324875_109325405
ENSMUSG00000020610.18_109319719_109325580_2	chr11	+	826	5	NNC	ENSMUSG00000020610.18	novel	931	5	NA	NA	91	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAGTGGGACGGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	109319718	109325580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_109319911_109320489_109320664_109320749_109320871_109324715_109324880_109325405
ENSMUSG00000020610.18_109319774_109324815_1	chr11	+	366	3	ISM	ENSMUSG00000020610.18	ENST00000359783.8	753	4	148	765	146	-765	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCATTTTTGATAACTATT	NA	NA	NA	NA	NA	NA	NA	NA	109319773	109324815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_109319911_109320749_109320879_109324715
ENSMUSG00000020610.18_109319811_109324879_1	chr11	+	393	3	ISM	ENSMUSG00000020610.18	ENST00000359783.8	753	4	185	701	183	-701	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATTTAGAAAACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	109319810	109324879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_109319911_109320749_109320879_109324715
ENSMUSG00000020611.15_109253773_109271301_1	chr11	+	798	3	FSM	ENSMUSG00000020611.15	ENSMUST00000106702.4	914	3	116	0	116	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATGTCCTCTTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	109253772	109271301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_109254083_109256361_109256589_109271040
ENSMUSG00000020611.15_109253804_109288721_1	chr11	+	2539	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	147	3474	147	-3474	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTGTGTGACTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	109253803	109288721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
ENSMUSG00000020611.15_109253961_109288876_1	chr11	+	2537	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	304	3319	304	-3319	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTTCACTGTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	109253960	109288876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
ENSMUSG00000020612.17_109541266_109551952_1	chr11	+	631	4	ISM	ENSMUSG00000020612.17	ENSMUST00000106676.8	962	5	-135	627	-135	-627	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGCAGGTTCTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	109541265	109551952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_109541451_109544604_109544788_109550824_109550996_109551860
ENSMUSG00000020612.17_109541401_109553148_1	chr11	+	605	6	ISM	ENSMUSG00000020612.17	ENSMUST00000106677.8	3513	12	1170	7334	0	569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAGTTAATGATAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	109541400	109553148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_109541451_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101
ENSMUSG00000020612.17_109544678_109553933_1	chr11	+	641	6	ISM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	2931	6549	2931	1354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAGGCTGTGGGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	109544677	109553933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774
ENSMUSG00000020612.17_109550847_109556713_1	chr11	+	593	7	ISM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	9100	3769	9100	-3769	internal_fragment	TRUE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACAGTAGCCGATGCATT	NA	NA	NA	NA	NA	NA	NA	NA	109550846	109556713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690
ENSMUSG00000020612.17_109550911_109556756_1	chr11	+	572	7	ISM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	9164	3726	9164	-3726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAAGATCGTGGTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	109550910	109556756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690
ENSMUSG00000020612.17_109550959_109556812_1	chr11	+	580	7	ISM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	9212	3670	9212	-3670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGAGCTCTGCGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	109550958	109556812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690
ENSMUSG00000020612.17_109551859_109557551_1	chr11	+	627	7	ISM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	10112	2931	10112	-2931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTAAATTTCTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	109551858	109557551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469
ENSMUSG00000020612.17_109552112_109558331_1	chr11	+	611	7	ISM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	10365	2151	10365	-2151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCGGCCTCGGTTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	109552111	109558331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ENSMUSG00000020612.17_109555601_109558577_1	chr11	+	571	4	ISM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	13854	1905	13854	-1905	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTATTAAATGCTCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	109555600	109558577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_109555646_109556690_109556813_109557469_109557552_109558255
ENSMUSG00000020612.17_109556770_109558720_1	chr11	+	590	3	ISM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	15023	1762	15023	-1762	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGATGTAATAGCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	109556769	109558720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_109556813_109557469_109557552_109558255
ENSMUSG00000020614.14_109563965_109566691_1	chr11	-	591	4	ISM	ENSMUSG00000020614.14	ENSMUST00000020938.8	2541	11	46391	213	46391	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCATCTTTATCCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	109566691	109563964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109564391_109565448_109565509_109565931_109566014_109566668
ENSMUSG00000020614.14_109564094_109566778_1	chr11	-	549	4	ISM	ENSMUSG00000020614.14	ENSMUST00000020938.8	2541	11	46304	342	46304	-342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGTCAGCACCTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	109566778	109564093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109564391_109565448_109565509_109565931_109566014_109566668
ENSMUSG00000020614.14_109564300_109568712_1	chr11	-	640	6	ISM	ENSMUSG00000020614.14	ENSMUST00000020938.8	2541	11	44370	548	44370	-548	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCAGCCCTGTCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	109568712	109564299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109564391_109565448_109565509_109565931_109566014_109566668_109566779_109567979_109568161_109568596
ENSMUSG00000020614.14_109565465_109569274_1	chr11	-	626	6	ISM	ENSMUSG00000020614.14	ENSMUST00000020938.8	2541	11	43808	1713	43808	-1713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCGCAGTGTTGCATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	109569274	109565464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109565509_109565931_109566014_109566668_109566779_109567979_109568161_109568596_109568713_109569181
ENSMUSG00000020614.14_109566668_109575519_1	chr11	-	636	6	ISM	ENSMUSG00000020614.14	ENSMUST00000020938.8	2541	11	37563	2916	37563	-2916	internal_fragment	TRUE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTACCCGACTCAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	109575519	109566667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109566779_109567979_109568161_109568596_109568713_109569181_109569275_109573662_109573742_109575463
ENSMUSG00000020614.14_109567979_109576247_1	chr11	-	600	6	ISM	ENSMUSG00000020614.14	ENSMUST00000020938.8	2541	11	36835	4227	36835	-4227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTAGCTTCCTGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	109576247	109567978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109568161_109568596_109568713_109569181_109569275_109573662_109573742_109575463_109575515_109576168
ENSMUSG00000020614.14_109568054_109576279_1	chr11	-	557	6	ISM	ENSMUSG00000020614.14	ENSMUST00000020938.8	2541	11	36803	4302	36803	-4302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTCAACCTAGCCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	109576279	109568053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109568161_109568596_109568713_109569181_109569275_109573662_109573742_109575463_109575515_109576168
ENSMUSG00000020614.14_109568096_109576339_1	chr11	-	575	6	ISM	ENSMUSG00000020614.14	ENSMUST00000020938.8	2541	11	36743	4344	36743	-4344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCACACCTGCTGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	109576339	109568095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109568161_109568596_109568713_109569181_109569275_109573662_109573742_109575463_109575515_109576168
ENSMUSG00000020614.14_109568624_109612249_1	chr11	-	609	6	ISM	ENSMUSG00000020614.14	ENSMUST00000020938.8	2541	11	833	4872	833	-4872	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGAGTGTGTTCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	109612249	109568623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109568713_109569181_109569275_109573662_109573742_109575463_109575515_109576168_109576354_109612137
ENSMUSG00000020614.14_109568698_109612293_1	chr11	-	579	6	ISM	ENSMUSG00000020614.14	ENSMUST00000020938.8	2541	11	789	4946	789	-4946	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGGTACCGCCAACAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	109612293	109568697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109568713_109569181_109569275_109573662_109573742_109575463_109575515_109576168_109576354_109612137
ENSMUSG00000020614.14_109576263_109612621_1	chr11	-	575	2	ISM	ENSMUSG00000020614.14	ENSMUST00000020938.8	2541	11	461	12511	461	-12511	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGGATCAACAGCCACGG	NA	NA	NA	NA	NA	NA	NA	NA	109612621	109576262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109576354_109612137
ENSMUSG00000020614.14_109576308_109612678_1	chr11	-	587	2	ISM	ENSMUSG00000020614.14	ENSMUST00000020938.8	2541	11	404	12556	404	-12556	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCGCTCCAGTTTCGACC	NA	NA	NA	NA	NA	NA	NA	NA	109612678	109576307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109576354_109612137
ENSMUSG00000020621.7_10440890_10445562_1	chr12	+	1359	2	NNC	ENSMUSG00000020621.7	novel	1480	2	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTGCATTTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	10440889	10445562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_10441227_10444540
ENSMUSG00000020621.7_10440967_10445562_1	chr12	+	1285	2	FSM	ENSMUSG00000020621.7	ENSMUST00000020947.7	1480	2	195	0	127	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTGCATTTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	10440966	10445562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_10441227_10444537
ENSMUSG00000020621.7_10444536_10494981_1	chr12	+	846	2	ISM	ENSMUSG00000020621.7	ENST00000381249.4	1231	3	3696	0	3696	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGATGAAGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	10444535	10494981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_10445340_10494939
ENSMUSG00000020628.17_28740930_28796567_1	chr12	-	1815	11	ISM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	3885	302	3809	-302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGAGCATCATGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	28796567	28740929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297
ENSMUSG00000020628.17_28741053_28796689_1	chr12	-	1814	11	ISM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	3763	425	3687	-425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTAAATAATATTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	28796689	28741052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297
ENSMUSG00000020628.17_28741149_28796837_1	chr12	-	1866	11	ISM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	3615	521	3539	-521	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATGGCATTCAGAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	28796837	28741148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297
ENSMUSG00000020628.17_28741789_28797218_1	chr12	-	1808	10	ISM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	3234	1161	3158	-1161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTGAGAATGGACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	28797218	28741788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297
ENSMUSG00000020629.13_28725230_28732174_1	chr12	+	1646	4	NNC	ENSMUSG00000020629.13	novel	1652	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCTCTCGAGAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	28725229	28732174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_28725372_28727776_28727897_28729394_28729569_28730964
ENSMUSG00000020630.10_28699601_28709069_1	chr12	+	936	8	FSM	ENSMUSG00000020630.10	ENSMUST00000020959.9	1455	8	0	519	0	-519	multi-exon	TRUE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACTGAGCAGAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	28699600	28709069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
ENSMUSG00000020630.10_28699623_28709140_1	chr12	+	985	8	FSM	ENSMUSG00000020630.10	ENSMUST00000020959.9	1455	8	22	448	22	-448	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTGTGCATGGAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	28699622	28709140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
ENSMUSG00000020630.10_28699729_28709203_1	chr12	+	942	8	FSM	ENSMUSG00000020630.10	ENSMUST00000020959.9	1455	8	128	385	128	-385	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAGGAAGTGTTAAATC	NA	NA	NA	NA	NA	NA	NA	NA	28699728	28709203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
ENSMUSG00000020630.10_28702023_28709370_1	chr12	+	1023	7	ISM	ENSMUSG00000020630.10	ENSMUST00000020959.9	1455	8	2422	218	2422	-218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATCTGAGATAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	28702022	28709370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
ENSMUSG00000020630.10_28705583_28709590_1	chr12	+	965	5	ISM	ENSMUSG00000020630.10	ENSMUST00000020959.9	1455	8	5982	-2	5982	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTAGTTTGAGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	28705582	28709590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
ENSMUSG00000020634.13_4930238_4933983_1	chr12	-	695	2	ISM	ENSMUSG00000020634.13	ENSMUST00000142867.8	2146	7	23281	889	23281	-889	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATGTTAGCTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	4933983	4930237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_4930772_4933822
ENSMUSG00000020634.13_4930390_4941395_1	chr12	-	760	4	ISM	ENSMUSG00000020634.13	ENSMUST00000142867.8	2146	7	15869	1041	15869	-1041	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGAAAAAAATACCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	4941395	4930389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314
ENSMUSG00000020634.13_4930519_4944595_1	chr12	-	715	5	ISM	ENSMUSG00000020634.13	ENSMUST00000142867.8	2146	7	12669	1170	12669	-1170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGTCAATGTGACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	4944595	4930518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537
ENSMUSG00000020634.13_4930580_4944644_1	chr12	-	703	5	ISM	ENSMUSG00000020634.13	ENSMUST00000142867.8	2146	7	12620	1231	12620	-1231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTATTTTTGAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	4944644	4930579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537
ENSMUSG00000020634.13_4933822_4957439_1	chr12	-	691	6	ISM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	266	4790	-175	-4473	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCCTTTGTCTCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	4957439	4933821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ENSMUSG00000020634.13_4935746_4957705_1	chr12	-	772	5	ISM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	0	6714	0	-6397	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACAGGGCCACAGACTA	NA	NA	NA	NA	NA	NA	NA	NA	4957705	4935745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ENSMUSG00000020635.9_4883174_4891463_1	chr12	-	908	5	FSM	ENSMUSG00000020635.9	ENST00000452109.1	927	5	39	-20	-28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTTGTGGGAGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	4891463	4883173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_4883796_4884738_4884852_4887439_4887496_4888164_4888217_4891398
ENSMUSG00000020644.10_25143798_25145867_1	chr12	-	1048	3	FSM	ENSMUSG00000020644.10	ENSMUST00000020974.7	1270	3	224	-2	219	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGGGATTCTGAATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	25145867	25143797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_25144576_25145309_25145374_25145661
ENSMUSG00000020644.10_25145311_25146217_1	chr12	-	619	2	ISM	ENSMUSG00000020644.10	ENSMUST00000020974.7	1270	3	-126	1511	-126	-182	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGAGTGTTGCGGGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	25146217	25145310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_25145374_25145661
ENSMUSG00000020644.10_25145912_25146863_1	chr12	-	601	2	ISM	ENSMUSG00000020644.10	ENSMUST00000221761.2	1969	4	276	2114	276	-783	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTGCTCTACAACATGA	NA	NA	NA	NA	NA	NA	NA	NA	25146863	25145911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_25146253_25146603
ENSMUSG00000020644.10_25146039_25147005_1	chr12	-	616	2	ISM	ENSMUSG00000020644.10	ENSMUST00000221761.2	1969	4	134	2241	134	-910	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCGGTCTTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	25147005	25146038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_25146253_25146603
ENSMUSG00000020647.11_4298961_4303728_1	chr12	-	859	2	ISM	ENSMUSG00000020647.11	ENST00000395856.3	6735	20	100772	1618	90772	222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGATGAAATTAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	4303728	4298960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_4299748_4303656
ENSMUSG00000020647.11_4299329_4313585_1	chr12	-	848	4	ISM	ENSMUSG00000020647.11	ENSMUST00000220434.2	4756	19	80915	146	80915	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCTTATTTCTTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	4313585	4299328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_4299751_4303656_4303747_4309211_4309396_4313433
ENSMUSG00000020647.11_4299451_4317740_1	chr12	-	883	5	ISM	ENSMUSG00000020647.11	ENSMUST00000220434.2	4756	19	76760	268	76760	-268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	4317740	4299450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_4299751_4303656_4303747_4309211_4309396_4313433_4313609_4317606
ENSMUSG00000020647.11_4299605_4317867_1	chr12	-	856	5	ISM	ENSMUSG00000020647.11	ENSMUST00000220434.2	4756	19	76633	422	76633	-422	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGCAGCTACTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	4317867	4299604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_4299751_4303656_4303747_4309211_4309396_4313433_4313609_4317606
ENSMUSG00000020647.11_4299678_4317910_1	chr12	-	826	5	ISM	ENSMUSG00000020647.11	ENSMUST00000220434.2	4756	19	76590	495	76590	-495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCTGGTCCACTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	4317910	4299677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_4299751_4303656_4303747_4309211_4309396_4313433_4313609_4317606
ENSMUSG00000020647.11_4309307_4324801_1	chr12	-	877	5	ISM	ENSMUSG00000020647.11	ENSMUST00000220434.2	4756	19	69699	10124	69699	-10124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACGCAAACATTCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	4324801	4309306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693
ENSMUSG00000020647.11_4317813_4328183_1	chr12	-	865	5	ISM	ENSMUSG00000020647.11	ENSMUST00000220434.2	4756	19	66317	18630	66317	-18630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTACCCACCAAACTATG	NA	NA	NA	NA	NA	NA	NA	NA	4328183	4317812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101
ENSMUSG00000020647.11_4320763_4340972_1	chr12	-	847	5	ISM	ENSMUSG00000020647.11	ENSMUST00000220434.2	4756	19	53528	21580	53528	-21580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATCACACCTCAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	4340972	4320762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813
ENSMUSG00000020647.11_4346201_4385841_1	chr12	-	852	7	ISM	ENSMUSG00000020647.11	ENSMUST00000220434.2	4756	19	8659	47018	8659	-47018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCCCCGAATAAATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	4385841	4346200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780
ENSMUSG00000020647.11_4347561_4389105_1	chr12	-	844	7	ISM	ENSMUSG00000020647.11	ENSMUST00000220434.2	4756	19	5395	48378	5395	-48378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCGCCCACACCAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	4389105	4347560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017
ENSMUSG00000020647.11_4363076_4404439_1	chr12	-	854	7	ISM	ENSMUSG00000020647.11	ENST00000395856.3	6735	20	61	65733	61	-63893	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCCATTACAGGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	4404439	4363075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360
ENSMUSG00000020648.4_31690162_31692850_1	chr12	-	1097	3	ISM	ENSMUSG00000020648.4	ENSMUST00000020977.4	1773	7	11975	113	11975	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAAAACCTCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	31692850	31690161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_31690944_31691500_31691728_31692762
ENSMUSG00000020649.12_24758240_24762973_1	chr12	+	1126	9	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	0	1172	0	-1172	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTGTTATTTATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	24758239	24762973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859
ENSMUSG00000020649.12_24758349_24763166_1	chr12	+	1105	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	109	979	109	-979	multi-exon	FALSE	canonical	NA	NA	NA	NA	2720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAGGATGGGAGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	24758348	24763166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ENSMUSG00000020649.12_24758555_24763340_1	chr12	+	1187	9	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	315	805	315	-805	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTAAAAAGCTGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	24758554	24763340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ENSMUSG00000020649.12_24759028_24763340_1	chr12	+	1018	8	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	788	805	788	-805	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTAAAAAGCTGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	24759027	24763340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ENSMUSG00000020649.12_24759322_24763501_1	chr12	+	1124	7	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	1082	644	1082	-644	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCCAGGTTTTAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	24759321	24763501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ENSMUSG00000020649.12_24761444_24763728_1	chr12	+	1100	5	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	3204	417	3204	-417	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCTCAGTATTATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	24761443	24763728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ENSMUSG00000020649.12_24762658_24763948_1	chr12	+	1091	3	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	4418	197	4418	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGATCTAGCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	24762657	24763948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24762765_24762859_24762974_24763078
ENSMUSG00000020649.12_24762858_24764145_1	chr12	+	1183	2	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	4618	0	4618	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTTGGGTAAAATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	24762857	24764145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24762974_24763078
ENSMUSG00000020650.16_31644181_31676789_1	chr12	-	2604	5	ISM	ENSMUSG00000020650.16	ENSMUST00000020979.9	1949	7	7809	-1179	4104	963	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCCACCACTACCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	31676789	31644180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724
ENSMUSG00000020650.16_31645208_31667172_1	chr12	-	1369	3	ISM	ENSMUSG00000020650.16	ENST00000465919.5	836	6	13721	-921	13721	-64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGAGGAAGACACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	31667172	31645207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_31646377_31650642_31650744_31667073
ENSMUSG00000020650.16_31645360_31676793_1	chr12	-	1421	5	ISM	ENSMUSG00000020650.16	ENST00000465919.5	836	6	4100	-769	4100	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATAATTGGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	31676793	31645359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_31646377_31650642_31650744_31667073_31667172_31674113_31674250_31676724
ENSMUSG00000020650.16_31645525_31680818_1	chr12	-	1365	6	FSM	ENSMUSG00000020650.16	ENST00000465919.5	836	6	75	-604	75	-74	multi-exon	FALSE	canonical	NA	NA	NA	NA	2175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACAGATCTCTCTACTAT	NA	NA	NA	NA	NA	NA	NA	NA	31680818	31645524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_31646377_31650642_31650744_31667073_31667172_31674113_31674250_31676724_31676876_31680791
ENSMUSG00000020650.16_31645631_31684281_1	chr12	-	1353	7	FSM	ENSMUSG00000020650.16	ENST00000379117.6	1633	7	100	180	99	-180	multi-exon	FALSE	canonical	NA	NA	NA	NA	2291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCCACTGACAAAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	31684281	31645630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_31646377_31650642_31650744_31667073_31667172_31674113_31674250_31676724_31676876_31680791_31680893_31684261
ENSMUSG00000020650.16_31645680_31684334_1	chr12	-	1357	7	FSM	ENSMUSG00000020650.16	ENST00000379117.6	1633	7	47	229	46	-229	multi-exon	FALSE	canonical	NA	NA	NA	NA	2193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCAAAACTGTCATACCA	NA	NA	NA	NA	NA	NA	NA	NA	31684334	31645679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_31646377_31650642_31650744_31667073_31667172_31674113_31674250_31676724_31676876_31680791_31680893_31684261
ENSMUSG00000020650.16_31645739_31684376_1	chr12	-	1340	7	FSM	ENSMUSG00000020650.16	ENST00000379117.6	1633	7	5	288	4	-288	multi-exon	FALSE	canonical	NA	NA	NA	NA	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATATATGGTCAGTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	31684376	31645738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_31646377_31650642_31650744_31667073_31667172_31674113_31674250_31676724_31676876_31680791_31680893_31684261
ENSMUSG00000020650.16_31646066_31684417_1	chr12	-	1062	7	FSM	ENSMUSG00000020650.16	ENSMUST00000020979.9	1949	7	181	706	-36	63	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATTAGATCTGAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	31684417	31646065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261
ENSMUSG00000020654.16_4183565_4184395_1	chr12	+	404	2	ISM	ENSMUSG00000020654.16	ENST00000679454.1	4553	22	46	79130	46	-79129	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTCTGACCCCGACCGC	NA	NA	NA	NA	NA	NA	NA	NA	4183564	4184395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_4183720_4184146
ENSMUSG00000020654.16_4183609_4184453_1	chr12	+	418	2	ISM	ENSMUSG00000020654.16	ENST00000679454.1	4553	22	90	79072	90	-79071	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTCCTGCCTGTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	4183608	4184453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_4183720_4184146
ENSMUSG00000020654.16_4256559_4260209_1	chr12	+	389	5	ISM	ENSMUSG00000020654.16	ENST00000679454.1	4553	22	73040	3316	72406	-3315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGACGAGATTGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	4256558	4260209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193
ENSMUSG00000020654.16_4260815_4262696_1	chr12	+	418	4	ISM	ENSMUSG00000020654.16	ENSMUST00000020984.9	4348	21	76662	828	76662	-828	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTTTCTTGAAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	4260814	4262696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_4260892_4261481_4261606_4262078_4262204_4262604
ENSMUSG00000020656.17_24631446_24665934_1	chr12	+	1386	12	FSM	ENSMUSG00000020656.17	ENST00000405379.6	1386	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGGGGTGGGGGGCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	24631445	24665934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_24631718_24634303_24634461_24634832_24634945_24636054_24636150_24652906_24653066_24658027_24658080_24658431_24658572_24659702_24659741_24661821_24661914_24662153_24662240_24664393_24664459_24665816
ENSMUSG00000020661.16_3856527_3946976_1	chr12	+	1448	10	ISM	ENSMUSG00000020661.16	ENST00000264709.7	6171	23	101	13867	101	-10866	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATTGAATGGGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	3856526	3946976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3856603_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885
ENSMUSG00000020661.16_3885117_3947365_1	chr12	+	1416	10	ISM	ENSMUSG00000020661.16	ENST00000264709.7	6171	23	28691	13478	27957	-10477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCCCACCAGCCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	3885116	3947365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297
ENSMUSG00000020661.16_3885147_3947395_1	chr12	+	1416	10	ISM	ENSMUSG00000020661.16	ENST00000264709.7	6171	23	28721	13448	27987	-10447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCACAACAGAGAAACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	3885146	3947395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297
ENSMUSG00000020661.16_3885234_3947429_1	chr12	+	1363	10	ISM	ENSMUSG00000020661.16	ENST00000264709.7	6171	23	28808	13414	28074	-10413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGCGCACAAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	3885233	3947429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297
ENSMUSG00000020661.16_3915984_3949685_1	chr12	+	1474	11	ISM	ENSMUSG00000020661.16	ENST00000264709.7	6171	23	59558	11158	-25744	-8157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACTGCTGCAGGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	3915983	3949685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586
ENSMUSG00000020661.16_3916191_3950047_1	chr12	+	1465	12	ISM	ENSMUSG00000020661.16	ENST00000264709.7	6171	23	59765	10796	-25537	-7795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTGGGTCTAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	3916190	3950047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863
ENSMUSG00000020661.16_3923367_3951571_1	chr12	+	1382	12	ISM	ENSMUSG00000020661.16	ENST00000264709.7	6171	23	66941	9272	-18361	-6271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATCCAAGTGGACCGCTA	NA	NA	NA	NA	NA	NA	NA	NA	3923366	3951571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548
ENSMUSG00000020661.16_3945593_3952434_1	chr12	+	1447	12	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	3865	5408	3849	-5408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCATTGTCAACCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	3945592	3952434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380
ENSMUSG00000020661.16_3945727_3952692_1	chr12	+	1377	13	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	3999	5150	3983	-5150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCGCCTCCTGCATGAT	NA	NA	NA	NA	NA	NA	NA	NA	3945726	3952692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665
ENSMUSG00000020661.16_3945988_3952814_1	chr12	+	1469	12	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	4260	5028	4244	-5028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAGACCGAGACCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	3945987	3952814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665
ENSMUSG00000020661.16_3946126_3954198_1	chr12	+	1390	13	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	4398	3644	4382	-3644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGTAACCTTCCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	3946125	3954198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139
ENSMUSG00000020661.16_3946577_3955662_1	chr12	+	1465	13	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	4849	2180	4833	-2180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTCAGCACTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	3946576	3955662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592
ENSMUSG00000020661.16_3946884_3956883_1	chr12	+	1477	13	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	5156	959	5140	-959	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGAGTGCTGGGTGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	3946883	3956883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764
ENSMUSG00000020661.16_3947027_3957639_1	chr12	+	1368	14	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	5299	203	5283	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAACATGAGCCGCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	3947026	3957639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ENSMUSG00000020661.16_3947296_3957842_1	chr12	+	1557	13	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	5568	0	5552	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACGGAGAAAAGTTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	3947295	3957842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ENSMUSG00000020661.16_3947420_3957842_1	chr12	+	1433	13	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	5692	0	5676	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACGGAGAAAAGTTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	3947419	3957842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ENSMUSG00000020661.16_3949869_3958065_1	chr12	+	1385	9	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	8141	-223	8125	223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTTTGTTTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	3949868	3958065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ENSMUSG00000020661.16_3949927_3958108_1	chr12	+	1370	9	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	8199	-266	8183	266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAGTTATTGCAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	3949926	3958108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ENSMUSG00000020661.16_3949973_3958175_1	chr12	+	1391	9	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	8245	-333	8229	333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGGAAAATTCTATAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	3949972	3958175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ENSMUSG00000020661.16_3950281_3958322_1	chr12	+	1459	8	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	8553	-480	8537	480	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGCAGTCTCAACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	3950280	3958322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ENSMUSG00000020661.16_3951630_3958423_1	chr12	+	1398	7	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	9902	-581	9886	581	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTGCCTACCACACAGG	NA	NA	NA	NA	NA	NA	NA	NA	3951629	3958423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ENSMUSG00000020661.16_3952381_3958547_1	chr12	+	1457	6	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	10653	-705	10637	705	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTACATCCCGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	3952380	3958547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ENSMUSG00000020661.16_3954156_3958727_1	chr12	+	1381	4	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	12428	-885	12412	885	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGCTTCACCTGCCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	3954155	3958727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3954226_3955592_3955663_3956764_3956884_3957605
ENSMUSG00000020661.16_3956816_3958938_1	chr12	+	1401	2	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	15088	-1096	15072	1096	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAAGTGACCCGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	3956815	3958938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_3956884_3957605
ENSMUSG00000020664.11_31381770_31384055_1	chr12	-	890	4	ISM	ENSMUSG00000020664.11	ENST00000440410.5	1866	13	17283	-1	17283	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACTAGAACAAGATTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	31384055	31381769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865
ENSMUSG00000020664.11_31382090_31385509_1	chr12	-	786	6	ISM	ENSMUSG00000020664.11	ENST00000440410.5	1866	13	15829	319	15829	-319	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGATGAAATTATGAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	31385509	31382089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464
ENSMUSG00000020664.11_31382132_31385568_1	chr12	-	803	6	ISM	ENSMUSG00000020664.11	ENST00000440410.5	1866	13	15770	361	15770	-361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATTTTTGAACAGGATAA	NA	NA	NA	NA	NA	NA	NA	NA	31385568	31382131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464
ENSMUSG00000020664.11_31382192_31385609_1	chr12	-	784	6	ISM	ENSMUSG00000020664.11	ENST00000440410.5	1866	13	15729	421	15729	-421	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATCAACTTTTAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	31385609	31382191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464
ENSMUSG00000020664.11_31382338_31390380_1	chr12	-	882	6	ISM	ENSMUSG00000020664.11	ENST00000440410.5	1866	13	10958	567	10958	-567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	851	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATTATTACCAATACACA	NA	NA	NA	NA	NA	NA	NA	NA	31390380	31382337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278
ENSMUSG00000020664.11_31383496_31390928_1	chr12	-	786	6	ISM	ENSMUSG00000020664.11	ENST00000440410.5	1866	13	10410	1725	10410	-1725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGGCATGGTGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	31390928	31383495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862
ENSMUSG00000020664.11_31384027_31392789_1	chr12	-	785	7	ISM	ENSMUSG00000020664.11	ENST00000440410.5	1866	13	8549	2256	8549	-2256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAATGTTGGCTCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	31392789	31384026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742
ENSMUSG00000020664.11_31384612_31394901_1	chr12	-	859	7	ISM	ENSMUSG00000020664.11	ENST00000440410.5	1866	13	6437	2841	6437	-2841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	844	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTGAATGATTACCTA	NA	NA	NA	NA	NA	NA	NA	NA	31394901	31384611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31394821
ENSMUSG00000020664.11_31384720_31399676_1	chr12	-	832	8	ISM	ENSMUSG00000020664.11	ENST00000440410.5	1866	13	1662	2949	1662	-2949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCGGCGGCCCTTTACTC	NA	NA	NA	NA	NA	NA	NA	NA	31399676	31384719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31394821_31394902_31399595
ENSMUSG00000020664.11_31385473_31401413_1	chr12	-	873	8	ISM	ENSMUSG00000020664.11	ENST00000440410.5	1866	13	-75	3702	39	-3702	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTCGTAAGTATGATA	NA	NA	NA	NA	NA	NA	NA	NA	31401413	31385472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31394821_31394902_31399595_31399675_31401299
ENSMUSG00000020664.11_31390961_31394869_1	chr12	-	334	5	ISM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	6583	9685	6469	-9190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGCTACAAAAGCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	31394869	31390960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821
ENSMUSG00000020664.11_31393373_31401413_1	chr12	-	343	4	ISM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	39	12097	39	-11602	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATGCGTTTCACACGC	NA	NA	NA	NA	NA	NA	NA	NA	31401413	31393372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_31393443_31394821_31394902_31399595_31399675_31401299
ENSMUSG00000020669.16_30992066_30992853_1	chr12	+	133	2	ISM	ENSMUSG00000020669.16	ENST00000403712.6	1037	8	19832	17203	19832	-17203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGCTCCCAGGGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	30992065	30992853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_30992134_30992788
ENSMUSG00000020669.16_30992819_31009862_1	chr12	+	113	2	ISM	ENSMUSG00000020669.16	ENST00000403712.6	1037	8	20585	194	20585	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTTGAATTTTCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	30992818	31009862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_30992872_31009802
ENSMUSG00000020671.10_3299420_3303358_1	chr12	-	643	3	ISM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	56611	1992	56611	-1992	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACAGTGGGATTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	3303358	3299419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_3299871_3302611_3302714_3303268
ENSMUSG00000020671.10_3299528_3306918_1	chr12	-	587	4	ISM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	53051	2100	53051	-2100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATTATAGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	3306918	3299527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866
ENSMUSG00000020671.10_3299572_3314709_1	chr12	-	651	5	ISM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	45260	2144	45260	-2144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTTCATTTTGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	3314709	3299571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688
ENSMUSG00000020671.10_3299574_3306975_1	chr12	-	598	4	ISM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	52994	2146	52994	-2146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGAGTTCATTTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	3306975	3299573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866
ENSMUSG00000020671.10_3299735_3359366_1	chr12	-	603	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	603	2307	603	-2307	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAACACTCTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	3359366	3299734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ENSMUSG00000020671.10_3299794_3359410_1	chr12	-	588	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	559	2366	559	-2366	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGAGTGCTCTCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	3359410	3299793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ENSMUSG00000020671.10_3299842_3359465_1	chr12	-	595	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	504	2414	504	-2414	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAGATATCAGCAGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	3359465	3299841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ENSMUSG00000020671.10_3306867_3359722_1	chr12	-	631	3	ISM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	247	9439	247	-9439	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACATAGCAGGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	3359722	3306866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_3307006_3314688_3314750_3359291
ENSMUSG00000020671.10_3314699_3359848_1	chr12	-	608	2	ISM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	121	17271	121	-17271	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATATGGTAAGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	3359848	3314698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_3314750_3359291
ENSMUSG00000020673.15_30144913_30148340_1	chr12	-	276	2	ISM	ENSMUSG00000020673.15	ENST00000382198.5	1501	8	21216	2369	21216	-2369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATACAAGCATGCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	30148340	30144912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_30145016_30148167
ENSMUSG00000020673.15_30148168_30150390_1	chr12	-	244	2	ISM	ENSMUSG00000020673.15	ENST00000382198.5	1501	8	19166	5624	19166	-5624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTCGGGTCTAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	30150390	30148167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_30148339_30150317
ENSMUSG00000020673.15_30150523_30154114_1	chr12	-	266	2	ISM	ENSMUSG00000020673.15	ENST00000382198.5	1501	8	15442	7979	15442	-7979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATGTGGGCCCCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	30154114	30150522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_30150577_30153902
ENSMUSG00000020673.15_30150559_30155947_1	chr12	-	267	3	ISM	ENSMUSG00000020673.15	ENST00000382198.5	1501	8	13609	8015	13609	-8015	internal_fragment	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATCCCCAAAATCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	30155947	30150558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_30150577_30153902_30154110_30155905
ENSMUSG00000020673.15_30154053_30166879_1	chr12	-	255	3	ISM	ENSMUSG00000020673.15	ENST00000382198.5	1501	8	2677	11509	2677	-11509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGTACTCTGATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30166879	30154052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_30154110_30155905_30156036_30166811
ENSMUSG00000020673.15_30155904_30169436_1	chr12	-	299	3	ISM	ENSMUSG00000020673.15	ENST00000382198.5	1501	8	120	13360	120	10713	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTACTCATTTAGAACCTA	NA	NA	NA	NA	NA	NA	NA	NA	30169436	30155903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_30156036_30166811_30166945_30169402
ENSMUSG00000020673.15_30155989_30169457_1	chr12	-	235	3	ISM	ENSMUSG00000020673.15	ENST00000382198.5	1501	8	99	13445	99	10628	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCCTGTCTATGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	30169457	30155988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_30156036_30166811_30166945_30169402
ENSMUSG00000020673.15_30156020_30169542_1	chr12	-	289	3	ISM	ENSMUSG00000020673.15	ENST00000382198.5	1501	8	14	13476	14	10597	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCTCCAACACAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	30169542	30156019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_30156036_30166811_30166945_30169402
ENSMUSG00000020679.12_83741700_83795841_1	chr11	+	1936	9	FSM	ENSMUSG00000020679.12	ENSMUST00000021016.10	2759	9	19	804	0	-541	multi-exon	FALSE	canonical	NA	NA	NA	NA	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCACCTGGGAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	83741699	83795841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_83742219_83746729_83746930_83752541_83752807_83754768_83755005_83773478_83773640_83779874_83780011_83784207_83784403_83787047_83787167_83795736
ENSMUSG00000020679.12_83741900_83795965_1	chr11	+	1860	9	FSM	ENSMUSG00000020679.12	ENSMUST00000021016.10	2759	9	219	680	156	-417	multi-exon	FALSE	canonical	NA	NA	NA	NA	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCTCCCAAGATGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	83741899	83795965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_83742219_83746729_83746930_83752541_83752807_83754768_83755005_83773478_83773640_83779874_83780011_83784207_83784403_83787047_83787167_83795736
ENSMUSG00000020679.12_83741901_83746929_1	chr11	+	518	2	ISM	ENSMUSG00000020679.12	ENST00000613727.4	1390	6	157	33079	157	-33079	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTTAACCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	83741900	83746929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83742219_83746729
ENSMUSG00000020679.12_83741962_83796017_1	chr11	+	1850	9	FSM	ENSMUSG00000020679.12	ENSMUST00000021016.10	2759	9	281	628	218	-365	multi-exon	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGGAATGGTGCAACGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	83741961	83796017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_83742219_83746729_83746930_83752541_83752807_83754768_83755005_83773478_83773640_83779874_83780011_83784207_83784403_83787047_83787167_83795736
ENSMUSG00000020679.12_83742155_83754814_1	chr11	+	497	4	ISM	ENSMUSG00000020679.12	ENST00000613727.4	1390	6	411	25194	411	-25194	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGCTCCAACTTGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	83742154	83754814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83742219_83746729_83746930_83752619_83752807_83754768
ENSMUSG00000020679.12_83742193_83754890_1	chr11	+	535	4	ISM	ENSMUSG00000020679.12	ENST00000613727.4	1390	6	449	25118	449	-25118	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCTGGCCATGGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	83742192	83754890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83742219_83746729_83746930_83752619_83752807_83754768
ENSMUSG00000020679.12_83746832_83796367_1	chr11	+	1841	8	ISM	ENSMUSG00000020679.12	ENSMUST00000108113.3	2376	9	3046	278	3046	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTCCCTCTCCCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	83746831	83796367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83746930_83752541_83752807_83754768_83755005_83773478_83773640_83779874_83780011_83784207_83784403_83787047_83787167_83795736
ENSMUSG00000020679.12_83746868_83773522_1	chr11	+	529	4	ISM	ENSMUSG00000020679.12	ENST00000613727.4	1390	6	5124	6486	3082	-6486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGACAATCAGTCACCATGG	NA	NA	NA	NA	NA	NA	NA	NA	83746867	83773522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83746930_83752619_83752807_83754768_83755005_83773478
ENSMUSG00000020680.16_83364484_83379871_1	chr11	+	706	8	ISM	ENSMUSG00000020680.16	ENST00000603777.5	1889	18	51	17698	51	-17698	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATTTAGATTACATT	NA	NA	NA	NA	NA	NA	NA	NA	83364483	83379871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83364526_83371935_83372008_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750
ENSMUSG00000020680.16_83375680_83392011_1	chr11	+	705	8	ISM	ENSMUSG00000020680.16	ENST00000603777.5	1889	18	11247	5558	11247	-5558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACAGTGTCATTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	83375679	83392011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83375721_83375802_83375906_83378048_83378240_83379750_83379872_83388087_83388123_83388719_83388753_83389898_83390009_83391940
ENSMUSG00000020680.16_83378133_83395127_1	chr11	+	685	8	ISM	ENSMUSG00000020680.16	ENST00000603777.5	1889	18	13700	2442	13700	-2442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGGACTGGGTTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	83378132	83395127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83378240_83379750_83379872_83388087_83388123_83388719_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071
ENSMUSG00000020680.16_83389898_83395930_1	chr11	+	739	7	ISM	ENSMUSG00000020680.16	ENST00000603777.5	1889	18	25465	1639	25465	-1639	internal_fragment	TRUE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATTCAGATATATCT	NA	NA	NA	NA	NA	NA	NA	NA	83389897	83395930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395558_83395786
ENSMUSG00000020680.16_83391942_83397287_1	chr11	+	671	7	ISM	ENSMUSG00000020680.16	ENST00000603777.5	1889	18	27509	282	27509	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCAGATACTCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	83391941	83397287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395558_83395786_83395931_83397243
ENSMUSG00000020680.16_83391979_83397354_1	chr11	+	701	7	ISM	ENSMUSG00000020680.16	ENST00000603777.5	1889	18	27546	215	27546	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGGCCTCTTGGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	83391978	83397354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395558_83395786_83395931_83397243
ENSMUSG00000020680.16_83392044_83397392_1	chr11	+	674	7	ISM	ENSMUSG00000020680.16	ENST00000603777.5	1889	18	27611	177	27611	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTGGGTGGGAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	83392043	83397392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395558_83395786_83395931_83397243
ENSMUSG00000020680.16_83393657_83397569_1	chr11	+	753	6	ISM	ENSMUSG00000020680.16	ENST00000603777.5	1889	18	29224	0	29224	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAGTGCATTATTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	83393656	83397569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83393679_83395071_83395154_83395253_83395343_83395467_83395558_83395786_83395931_83397243
ENSMUSG00000020687.14_104393350_104395155_1	chr11	-	1626	2	ISM	ENSMUSG00000020687.14	ENST00000066544.8	5492	20	46182	-2	46063	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATGGTAATTTTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	104395155	104393349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_104394025_104394204
ENSMUSG00000020687.14_104393571_104395342_1	chr11	-	1592	2	ISM	ENSMUSG00000020687.14	ENST00000066544.8	5492	20	45995	219	45876	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATAATCAAGGTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	104395342	104393570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_104394025_104394204
ENSMUSG00000020687.14_104393771_104395573_1	chr11	-	1623	2	ISM	ENSMUSG00000020687.14	ENST00000066544.8	5492	20	45764	419	45645	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACCTGGGAAAATGCAA	NA	NA	NA	NA	NA	NA	NA	NA	104395573	104393770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_104394025_104394204
ENSMUSG00000020687.14_104393837_104395656_1	chr11	-	1636	2	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	45562	-266	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGATTAGCCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	104395656	104393836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_104394020_104394203
ENSMUSG00000020687.14_104393922_104395734_1	chr11	-	1629	2	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	45484	-351	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCTGCTGTTGTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	104395734	104393921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_104394020_104394203
ENSMUSG00000020687.14_104394947_104398029_1	chr11	-	1626	2	ISM	ENSMUSG00000020687.14	ENSMUST00000106962.9	3160	19	43189	-816	43189	816	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTTAACCTTCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	104398029	104394946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_104396507_104397963
ENSMUSG00000020687.14_104394977_104398101_1	chr11	-	1668	2	ISM	ENSMUSG00000020687.14	ENSMUST00000106962.9	3160	19	43117	-786	43117	786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCCTGTAGACTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	104398101	104394976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_104396507_104397963
ENSMUSG00000020687.14_104395083_104401023_1	chr11	-	1683	4	ISM	ENSMUSG00000020687.14	ENSMUST00000106962.9	3160	19	40195	-680	40195	680	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTTTGGAATGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	104401023	104395082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996
ENSMUSG00000020687.14_104395257_104403764_1	chr11	-	1649	5	ISM	ENSMUSG00000020687.14	ENSMUST00000106962.9	3160	19	37454	-506	37454	506	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAATGGGAATTATTGG	NA	NA	NA	NA	NA	NA	NA	NA	104403764	104395256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726
ENSMUSG00000020687.14_104395452_104406299_1	chr11	-	1636	6	ISM	ENSMUSG00000020687.14	ENSMUST00000106962.9	3160	19	34919	-311	34919	311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTACTTCGTAATTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	104406299	104395451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197
ENSMUSG00000020687.14_104395620_104408273_1	chr11	-	1647	7	ISM	ENSMUSG00000020687.14	ENSMUST00000106962.9	3160	19	32945	-143	32945	143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACTGTGTTTACCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	104408273	104395619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201
ENSMUSG00000020687.14_104395763_104411627_1	chr11	-	1723	8	ISM	ENSMUSG00000020687.14	ENSMUST00000106962.9	3160	19	29591	0	29591	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGATCATTGTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	104411627	104395762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489
ENSMUSG00000020687.14_104395943_104412267_1	chr11	-	1639	9	ISM	ENSMUSG00000020687.14	ENSMUST00000106962.9	3160	19	28951	180	28951	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCATTGCCAAGGAACATA	NA	NA	NA	NA	NA	NA	NA	NA	104412267	104395942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206
ENSMUSG00000020687.14_104396004_104412329_1	chr11	-	1640	9	ISM	ENSMUSG00000020687.14	ENSMUST00000106962.9	3160	19	28889	241	28889	-241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATGGTGTTAGCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	104412329	104396003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206
ENSMUSG00000020687.14_104396158_104413600_1	chr11	-	1623	10	ISM	ENSMUSG00000020687.14	ENSMUST00000106962.9	3160	19	27618	395	27618	225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATGGAAGGAAGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	104413600	104396157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548
ENSMUSG00000020687.14_104396383_104441223_1	chr11	-	2521	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTCCCTCCATACACTG	NA	NA	NA	NA	NA	NA	NA	NA	104441223	104396382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422561_104422682_104425563_104425712_104427420_104427497_104441188
ENSMUSG00000020687.14_104396383_104441223_2	chr11	-	2522	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTCCCTCCATACACTG	NA	NA	NA	NA	NA	NA	NA	NA	104441223	104396382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419554_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ENSMUSG00000020687.14_104396383_104441223_3	chr11	-	2519	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1061	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTCCCTCCATACACTG	NA	NA	NA	NA	NA	NA	NA	NA	104441223	104396382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422674_104425563_104425712_104427420_104427497_104441188
ENSMUSG00000020687.14_104396383_104441223_4	chr11	-	2527	19	FSM	ENSMUSG00000020687.14	ENSMUST00000093923.9	5425	19	86	2812	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTCCCTCCATACACTG	NA	NA	NA	NA	NA	NA	NA	NA	104441223	104396382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ENSMUSG00000020687.14_104396383_104441223_5	chr11	-	2516	19	NNC	ENSMUSG00000020687.14	novel	2568	19	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTCCCTCCATACACTG	NA	NA	NA	NA	NA	NA	NA	NA	104441223	104396382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408347_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ENSMUSG00000020691.14_105017251_105031069_1	chr11	+	1716	9	FSM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	0	151	0	-151	multi-exon	TRUE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTAGATCCTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	105017250	105031069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ENSMUSG00000020691.14_105017601_105031247_1	chr11	+	1713	8	ISM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	350	-27	350	27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGCTAACACATTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	105017600	105031247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ENSMUSG00000020692.15_82791804_82795709_1	chr11	-	782	7	ISM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	3528	210	3497	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAATGCACACGACCACC	NA	NA	NA	NA	NA	NA	NA	NA	82795709	82791803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617
ENSMUSG00000020692.15_82792404_82796136_1	chr11	-	822	7	ISM	ENSMUSG00000020692.15	ENST00000360831.9	1343	11	3070	21	3070	-21	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGACAAGTGCCTCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	82796136	82792403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103
ENSMUSG00000020692.15_82792565_82796409_1	chr11	-	884	7	ISM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	2828	971	2797	-182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACGGACCTGCCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	82796409	82792564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332
ENSMUSG00000020692.15_82793819_82797330_1	chr11	-	836	7	ISM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	1907	2225	1876	-1436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGCGGGGCGAGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	82797330	82793818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250
ENSMUSG00000020692.15_82793943_82798513_1	chr11	-	847	8	ISM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	724	2349	693	-1560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGCCCGGATGACAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	82798513	82793942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378
ENSMUSG00000020692.15_82795159_82798983_1	chr11	-	775	7	ISM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	254	3565	223	-2776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTATGGCACTTAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	82798983	82795158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917
ENSMUSG00000020694.18_105072463_105173003_1	chr11	+	3589	22	FSM	ENSMUSG00000020694.18	ENSMUST00000106941.9	3699	22	110	0	110	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	105072462	105173003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ENSMUSG00000020695.15_105231408_105238790_1	chr11	+	1505	12	ISM	ENSMUSG00000020695.15	ENSMUST00000100335.10	5795	30	47936	3175	-2512	-2859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTTGGGCCACAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	105231407	105238790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105231503_105231623_105231660_105231919_105232081_105232176_105232245_105233918_105234020_105234281_105234425_105237035_105237151_105237255_105237420_105237545_105237655_105238060_105238300_105238424_105238594_105238685
ENSMUSG00000020695.15_105232187_105239535_1	chr11	+	1477	11	ISM	ENSMUSG00000020695.15	ENSMUST00000100335.10	5795	30	48715	2430	-1733	-2114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCGGACTGTGGCGCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	105232186	105239535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105232245_105233918_105234020_105234281_105234425_105237035_105237151_105237255_105237420_105237545_105237655_105238060_105238300_105238424_105238594_105238685_105238833_105239132_105239253_105239423
ENSMUSG00000020695.15_105233975_105238547_1	chr11	+	854	6	ISM	ENSMUSG00000020695.15	ENST00000446119.2	2543	10	55	3102	55	-3102	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGTGATACCAAGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	105233974	105238547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105234073_105234179_105234425_105237035_105237151_105237255_105237420_105237545_105237655_105238424
ENSMUSG00000020695.15_105234219_105238771_1	chr11	+	849	6	ISM	ENSMUSG00000020695.15	ENST00000446119.2	2543	10	299	2878	299	-2878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTCCACATGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	105234218	105238771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105234425_105237035_105237151_105237255_105237420_105237545_105237655_105238424_105238594_105238685
ENSMUSG00000020695.15_105234340_105239188_1	chr11	+	845	7	ISM	ENSMUSG00000020695.15	ENST00000446119.2	2543	10	420	2461	420	-2461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTGCAGACAGCTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	105234339	105239188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105234425_105237035_105237151_105237255_105237420_105237545_105237655_105238424_105238594_105238685_105238833_105239132
ENSMUSG00000020695.15_105234392_105239243_1	chr11	+	848	7	ISM	ENSMUSG00000020695.15	ENST00000446119.2	2543	10	472	2406	472	-2406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAAAGGTGGGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	105234391	105239243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105234425_105237035_105237151_105237255_105237420_105237545_105237655_105238424_105238594_105238685_105238833_105239132
ENSMUSG00000020695.15_105237060_105239521_1	chr11	+	898	7	ISM	ENSMUSG00000020695.15	ENST00000446119.2	2543	10	3140	2128	3140	-2128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCCAGAGCAGCAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	105237059	105239521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105237151_105237255_105237420_105237545_105237655_105238424_105238594_105238685_105238833_105239132_105239253_105239423
ENSMUSG00000020695.15_105237315_105240940_1	chr11	+	1512	9	ISM	ENSMUSG00000020695.15	ENSMUST00000100335.10	5795	30	53843	1025	3395	-709	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGGGAGTACCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	105237314	105240940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105237420_105237545_105237655_105238060_105238300_105238424_105238594_105238685_105238833_105239132_105239253_105239423_105239604_105240393_105240421_105240524
ENSMUSG00000020695.15_105237369_105240579_1	chr11	+	847	7	ISM	ENSMUSG00000020695.15	ENST00000446119.2	2543	10	3449	1070	3449	-1070	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGGCCTTGATGACGG	NA	NA	NA	NA	NA	NA	NA	NA	105237368	105240579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105237420_105237545_105237655_105238424_105238594_105238685_105238833_105239132_105239253_105239423_105239620_105240524
ENSMUSG00000020695.15_105238453_105240780_1	chr11	+	860	5	ISM	ENSMUSG00000020695.15	ENST00000446119.2	2543	10	4533	869	4533	-869	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGGGGGAGGCAGGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	105238452	105240780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105238594_105238685_105238833_105239132_105239253_105239423_105239620_105240524
ENSMUSG00000020695.15_105238528_105240842_1	chr11	+	847	5	ISM	ENSMUSG00000020695.15	ENST00000446119.2	2543	10	4608	807	4608	-807	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGGTCAGCAGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	105238527	105240842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105238594_105238685_105238833_105239132_105239253_105239423_105239620_105240524
ENSMUSG00000020695.15_105239131_105241112_1	chr11	+	906	3	ISM	ENSMUSG00000020695.15	ENST00000446119.2	2543	10	5211	537	5211	-537	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTAAACCTGCTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	105239130	105241112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105239253_105239423_105239620_105240524
ENSMUSG00000020695.15_105239467_105241238_1	chr11	+	867	2	ISM	ENSMUSG00000020695.15	ENST00000446119.2	2543	10	5547	411	5547	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCCTCGTGCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	105239466	105241238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105239620_105240524
ENSMUSG00000020695.15_105239530_105241290_1	chr11	+	856	2	ISM	ENSMUSG00000020695.15	ENST00000446119.2	2543	10	5610	359	5610	-359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGACTTGGGTGATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	105239529	105241290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105239620_105240524
ENSMUSG00000020696.19_82696433_82701047_1	chr11	-	797	2	ISM	ENSMUSG00000020696.19	ENST00000584655.5	1728	5	60954	167	18810	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTGTTAATGTATC	NA	NA	NA	NA	NA	NA	NA	NA	82701047	82696432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82697016_82700833
ENSMUSG00000020696.19_82696433_82701924_1	chr11	-	880	3	ISM	ENSMUSG00000020696.19	ENST00000394597.7	1783	6	34777	167	17933	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTGTTAATGTATC	NA	NA	NA	NA	NA	NA	NA	NA	82701924	82696432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82697016_82700818_82701045_82701853
ENSMUSG00000020696.19_82696557_82703309_1	chr11	-	754	3	ISM	ENSMUSG00000020696.19	ENST00000584655.5	1728	5	58692	291	16548	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTAAGATCCATTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	82703309	82696556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82697016_82700833_82701045_82703225
ENSMUSG00000020696.19_82696620_82703403_1	chr11	-	785	3	ISM	ENSMUSG00000020696.19	ENST00000584655.5	1728	5	58598	354	16454	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATTGGATGGTGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	82703403	82696619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82697016_82700833_82701045_82703225
ENSMUSG00000020696.19_82696683_82703359_1	chr11	-	777	4	ISM	ENSMUSG00000020696.19	ENST00000394597.7	1783	6	33342	417	16498	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGGCAGAGCCCAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	82703359	82696682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82697016_82700818_82701045_82701853_82701938_82703225
ENSMUSG00000020696.19_82696757_82703543_1	chr11	-	788	3	ISM	ENSMUSG00000020696.19	ENST00000584655.5	1728	5	58458	491	16314	-324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGTCTACTGTGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	82703543	82696756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82697016_82700833_82701045_82703225
ENSMUSG00000020696.19_82696831_82703507_1	chr11	-	777	4	ISM	ENSMUSG00000020696.19	ENST00000394597.7	1783	6	33194	565	16350	-398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATTGGTTTCTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	82703507	82696830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82697016_82700818_82701045_82701853_82701938_82703225
ENSMUSG00000020696.19_82696888_82703567_1	chr11	-	780	4	ISM	ENSMUSG00000020696.19	ENST00000394597.7	1783	6	33134	622	16290	-455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTATCTGCCGGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	82703567	82696887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82697016_82700818_82701045_82701853_82701938_82703225
ENSMUSG00000020696.19_82696899_82709269_1	chr11	-	767	4	ISM	ENSMUSG00000020696.19	ENST00000584655.5	1728	5	52732	633	10588	-466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGAACGAATGTCCTATC	NA	NA	NA	NA	NA	NA	NA	NA	82709269	82696898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82697016_82700833_82701045_82703225_82703637_82709241
ENSMUSG00000020696.19_82696949_82709324_1	chr11	-	772	4	ISM	ENSMUSG00000020696.19	ENST00000584655.5	1728	5	52677	683	10533	-516	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGCTGGAGTGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	82709324	82696948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82697016_82700833_82701045_82703225_82703637_82709241
ENSMUSG00000020696.19_82696996_82709272_1	chr11	-	772	5	ISM	ENSMUSG00000020696.19	ENST00000394597.7	1783	6	27429	730	10585	-563	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGGAGAACCTGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	82709272	82696995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82697016_82700818_82701045_82701853_82701938_82703225_82703637_82709241
ENSMUSG00000020696.19_82697000_82709391_1	chr11	-	788	4	ISM	ENSMUSG00000020696.19	ENST00000584655.5	1728	5	52610	734	10466	-567	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTGGAGGAGAACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	82709391	82696999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82697016_82700833_82701045_82703225_82703637_82709241
ENSMUSG00000020696.19_82700907_82761899_1	chr11	-	803	4	ISM	ENSMUSG00000020696.19	ENST00000584655.5	1728	5	102	4641	102	-2659	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCGAGAAGTGGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	82761899	82700906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82701045_82703225_82703637_82709241_82709430_82761833
ENSMUSG00000020696.19_82700959_82736652_1	chr11	-	844	5	ISM	ENSMUSG00000020696.19	ENST00000394597.7	1783	6	49	4693	49	-2711	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACGGCAGCTGAAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	82736652	82700958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82736577
ENSMUSG00000020696.19_82700974_82761934_1	chr11	-	771	4	ISM	ENSMUSG00000020696.19	ENST00000584655.5	1728	5	67	4708	67	-2726	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAAGGCCTGACCGTAC	NA	NA	NA	NA	NA	NA	NA	NA	82761934	82700973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82701045_82703225_82703637_82709241_82709430_82761833
ENSMUSG00000020696.19_82701029_82762036_1	chr11	-	818	4	ISM	ENSMUSG00000020696.19	ENST00000584655.5	1728	5	-35	4763	0	-2781	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTTCGTCCCAGGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	82762036	82701028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82701045_82703225_82703637_82709241_82709430_82761833
ENSMUSG00000020698.12_82610076_82645864_1	chr11	-	1164	10	ISM	ENSMUSG00000020698.12	ENST00000421975.7	1457	13	9132	-83	9132	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1615	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGTTTGAAAAACACTTA	NA	NA	NA	NA	NA	NA	NA	NA	82645864	82610075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82610261_82610760_82610834_82613206_82613310_82614639_82614774_82627139_82627288_82627916_82628014_82630448_82630532_82632101_82632262_82644459_82644564_82645787
ENSMUSG00000020698.12_82610761_82632946_1	chr11	-	909	8	ISM	ENSMUSG00000020698.12	ENST00000436961.7	1433	13	22050	602	22050	-602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1060	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATTGGCAATGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	82632946	82610760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82610834_82613206_82613310_82614639_82614774_82627139_82627288_82627916_82628014_82630448_82630532_82632101_82632262_82632835
ENSMUSG00000020698.12_82610811_82651210_1	chr11	-	1061	10	ISM	ENSMUSG00000020698.12	ENST00000421975.7	1457	13	3786	652	3786	-652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGAATCTGGGATAATTA	NA	NA	NA	NA	NA	NA	NA	NA	82651210	82610810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82610834_82613206_82613310_82614639_82614774_82627139_82627288_82627916_82628014_82630448_82630532_82632101_82632262_82644459_82644564_82645787_82645962_82651175
ENSMUSG00000020698.12_82613206_82651311_1	chr11	-	1140	9	ISM	ENSMUSG00000020698.12	ENST00000421975.7	1457	13	3685	3047	3685	-3047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAGAAATTGGAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	82651311	82613205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82613310_82614639_82614774_82627139_82627288_82627916_82628014_82630448_82630532_82632101_82632262_82644459_82644564_82645787_82645962_82651175
ENSMUSG00000020698.12_82613277_82644491_1	chr11	-	798	8	ISM	ENSMUSG00000020698.12	ENST00000436961.7	1433	13	10505	3118	10505	-3118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACACTGATAAAAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	82644491	82613276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82613310_82614639_82614774_82627139_82627288_82627916_82628014_82630448_82630532_82632101_82632262_82632835_82632947_82644459
ENSMUSG00000020698.12_82614717_82654948_1	chr11	-	1054	10	ISM	ENSMUSG00000020698.12	ENST00000421975.7	1457	13	48	4558	48	-4558	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACAAGCACCGTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	82654948	82614716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82614774_82627139_82627288_82627916_82628014_82630448_82630532_82632101_82632262_82644459_82644564_82645787_82645962_82651175_82651311_82653013_82653078_82654916
ENSMUSG00000020698.12_82614730_82645846_1	chr11	-	806	8	ISM	ENSMUSG00000020698.12	ENST00000436961.7	1433	13	9150	4571	9150	-4571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTCTTGTTAACTACAA	NA	NA	NA	NA	NA	NA	NA	NA	82645846	82614729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82614774_82627139_82627288_82627916_82628014_82630448_82630532_82632101_82632262_82632835_82632947_82644459_82644564_82645787
ENSMUSG00000020698.12_82627139_82645962_1	chr11	-	876	7	NNC	ENSMUSG00000020698.12	novel	1433	13	NA	NA	9034	-16980	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCAAGCTCCTCCCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	82645962	82627138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_82627281_82627912_82628014_82630448_82630532_82632101_82632262_82632835_82632947_82644459_82644564_82645787
ENSMUSG00000020698.12_82627243_82653043_1	chr11	-	804	8	ISM	ENSMUSG00000020698.12	ENST00000436961.7	1433	13	1953	17084	1953	-17084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCACCTTGTTGGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	82653043	82627242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82627288_82627916_82628014_82630448_82630532_82632101_82632262_82632835_82632947_82644459_82644564_82645787_82645962_82653013
ENSMUSG00000020698.12_82627960_82654959_1	chr11	-	793	8	ISM	ENSMUSG00000020698.12	ENST00000436961.7	1433	13	37	17801	37	-17801	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGCCTGGGGCACGCTG	NA	NA	NA	NA	NA	NA	NA	NA	82654959	82627959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82628014_82630448_82630532_82632101_82632262_82632835_82632947_82644459_82644564_82645787_82645962_82653013_82653078_82654916
ENSMUSG00000020700.12_105975578_106005036_1	chr11	+	474	5	ISM	ENSMUSG00000020700.12	ENST00000584573.5	2477	17	157	40155	-122	-40080	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACGAAGATGTGGAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	105975577	106005036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105975760_105987816_105987939_105989671_105989774_106001569_106001611_106005009
ENSMUSG00000020700.12_105975700_106042504_1	chr11	+	1449	14	ISM	ENSMUSG00000020700.12	ENST00000577395.5	2021	16	0	2612	0	-2612	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	941	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCGGCAGATTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	105975699	106042504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036574_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443
ENSMUSG00000020700.12_105975711_106008352_1	chr11	+	451	6	ISM	ENSMUSG00000020700.12	ENST00000584573.5	2477	17	290	36839	11	-36764	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCATTGACATTTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	105975710	106008352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105975760_105987816_105987939_105989671_105989774_106001569_106001611_106005009_106005110_106008315
ENSMUSG00000020700.12_105987877_106043101_1	chr11	+	1457	14	ISM	ENSMUSG00000020700.12	ENST00000577395.5	2021	16	12177	2015	12177	-2015	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGCCTACAGACCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	105987876	106043101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036574_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042
ENSMUSG00000020700.12_105987881_106014670_1	chr11	+	474	6	ISM	ENSMUSG00000020700.12	ENST00000584573.5	2477	17	12460	30521	12181	-30446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGGGGATATAAATACCA	NA	NA	NA	NA	NA	NA	NA	NA	105987880	106014670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105987939_105989671_105989774_106001569_106001611_106005009_106005110_106008315_106008430_106014611
ENSMUSG00000020700.12_106001570_106043221_1	chr11	+	1515	13	ISM	ENSMUSG00000020700.12	ENST00000577395.5	2021	16	25870	1895	25870	-1895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACTGGCTATGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	106001569	106043221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036574_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042
ENSMUSG00000020700.12_106005046_106044817_1	chr11	+	1463	13	ISM	ENSMUSG00000020700.12	ENST00000577395.5	2021	16	29346	299	29346	-299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1081	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGACAGAGAAACCACCT	NA	NA	NA	NA	NA	NA	NA	NA	106005045	106044817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036574_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ENSMUSG00000020700.12_106008314_106044966_1	chr11	+	1550	12	ISM	ENSMUSG00000020700.12	ENST00000577395.5	2021	16	32614	150	32614	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCTCAGCTGAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	106008313	106044966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106008430_106014611_106014733_106033250_106033385_106036511_106036574_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ENSMUSG00000020700.12_106033251_106045117_1	chr11	+	1464	10	ISM	ENSMUSG00000020700.12	ENST00000577395.5	2021	16	57551	-1	57551	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAGTGGAGCATCGGTC	NA	NA	NA	NA	NA	NA	NA	NA	106033250	106045117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106033385_106036511_106036574_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ENSMUSG00000020700.12_106041833_106044820_1	chr11	+	471	4	ISM	ENSMUSG00000020700.12	ENST00000577395.5	2021	16	66133	296	66133	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGAGAAACCACCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	106041832	106044820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106041967_106042443_106042574_106043042_106043221_106044791
ENSMUSG00000020700.12_106041946_106044966_1	chr11	+	504	4	ISM	ENSMUSG00000020700.12	ENST00000577395.5	2021	16	66246	150	66246	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCTCAGCTGAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	106041945	106044966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106041967_106042443_106042574_106043042_106043221_106044791
ENSMUSG00000020700.12_106043042_106045117_1	chr11	+	505	2	ISM	ENSMUSG00000020700.12	ENST00000577395.5	2021	16	67342	-1	67342	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAGTGGAGCATCGGTC	NA	NA	NA	NA	NA	NA	NA	NA	106043041	106045117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106043221_106044791
ENSMUSG00000020704.14_80770995_80843365_1	chr11	-	1653	8	ISM	ENSMUSG00000020704.14	ENSMUST00000021045.13	3436	10	200782	0	19075	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGCCTTTTCTCTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	80843365	80770994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_80771985_80772438_80772508_80774247_80774328_80777421_80777514_80780558_80780713_80782569_80782627_80784799_80784951_80843305
ENSMUSG00000020704.14_80771105_80862362_1	chr11	-	1684	9	ISM	ENSMUSG00000020704.14	ENSMUST00000021045.13	3436	10	181785	110	78	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTCCATTTCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	80862362	80771104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_80771985_80772438_80772508_80774247_80774328_80777421_80777514_80780558_80780713_80782569_80782627_80784799_80784951_80843305_80843434_80862289
ENSMUSG00000020704.14_80771927_81042671_1	chr11	-	1028	10	FSM	ENSMUSG00000020704.14	ENSMUST00000021045.13	3436	10	1476	932	1476	-921	multi-exon	TRUE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCAGACAGCTTTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	81042671	80771926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_80771985_80772438_80772508_80774247_80774328_80777421_80777514_80780558_80780713_80782569_80782627_80784799_80784951_80843305_80843434_80862289_80862441_81042583
ENSMUSG00000020704.14_80774291_81042907_1	chr11	-	1094	8	ISM	ENSMUSG00000020704.14	ENSMUST00000021045.13	3436	10	1240	3296	1240	-3285	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATCCTTACAATACTAG	NA	NA	NA	NA	NA	NA	NA	NA	81042907	80774290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_80774328_80777421_80777514_80780558_80780713_80782569_80782627_80784799_80784951_80843305_80843434_80862289_80862441_81042583
ENSMUSG00000020704.14_80780627_81043050_1	chr11	-	1040	6	ISM	ENSMUSG00000020704.14	ENSMUST00000021045.13	3436	10	1097	9632	1097	-9621	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCCCAGCAAGACGTC	NA	NA	NA	NA	NA	NA	NA	NA	81043050	80780626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_80780713_80782569_80782627_80784799_80784951_80843305_80843434_80862289_80862441_81042583
ENSMUSG00000020704.14_80780683_81043106_1	chr11	-	1040	6	ISM	ENSMUSG00000020704.14	ENSMUST00000021045.13	3436	10	1041	9688	1041	-9677	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCAGGACACCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	81043106	80780682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_80780713_80782569_80782627_80784799_80784951_80843305_80843434_80862289_80862441_81042583
ENSMUSG00000020704.14_80784905_81043290_1	chr11	-	1032	4	ISM	ENSMUSG00000020704.14	ENSMUST00000021045.13	3436	10	857	13910	857	-13899	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTCGACTTCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	81043290	80784904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_80784951_80843305_80843434_80862289_80862441_81042583
ENSMUSG00000020704.14_80843403_81043440_1	chr11	-	1039	3	ISM	ENSMUSG00000020704.14	ENSMUST00000021045.13	3436	10	707	72408	707	-72397	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATCCACAGCCAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	81043440	80843402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_80843434_80862289_80862441_81042583
ENSMUSG00000020704.14_80862399_81043569_1	chr11	-	1028	2	ISM	ENSMUSG00000020704.14	ENSMUST00000021045.13	3436	10	578	91404	578	-91393	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGGCAAGCCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	81043569	80862398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_80862441_81042583
ENSMUSG00000020705.7_106107869_106125745_1	chr11	+	637	7	NNC	ENSMUSG00000020705.7	novel	2694	17	NA	NA	65	-13247	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCAGATTAGGAAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	106107868	106125745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_106107929_106115609_106115765_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677
ENSMUSG00000020705.7_106107928_106138452_1	chr11	+	2322	18	FSM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	176	1513	124	-540	multi-exon	FALSE	canonical	NA	NA	NA	NA	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTCCTGACAACCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	106107927	106138452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ENSMUSG00000020705.7_106115005_106138596_1	chr11	+	2313	17	ISM	ENSMUSG00000020705.7	ENST00000583590.5	3798	18	7216	1247	7201	-396	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGATTGGGGGTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	106115004	106138596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ENSMUSG00000020705.7_106115055_106138666_1	chr11	+	2333	17	ISM	ENSMUSG00000020705.7	ENST00000583590.5	3798	18	7266	1177	7251	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGATGGTGGCAATCGG	NA	NA	NA	NA	NA	NA	NA	NA	106115054	106138666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ENSMUSG00000020705.7_106115634_106126451_1	chr11	+	620	7	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	7830	12541	7830	-12541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGAGAGACATGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	106115633	106126451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432
ENSMUSG00000020705.7_106115670_106126517_1	chr11	+	650	7	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	7866	12475	7866	-12475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGATTCATATAATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	106115669	106126517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432
ENSMUSG00000020705.7_106115724_106126564_1	chr11	+	643	7	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	7920	12428	7920	-12428	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTGCAGTTATTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	106115723	106126564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432
ENSMUSG00000020705.7_106121156_106127860_1	chr11	+	629	6	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	13352	11132	13352	-11132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGATCAGTGGCCGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	106121155	106127860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820
ENSMUSG00000020705.7_106122000_106139028_1	chr11	+	2313	13	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	14196	-36	14196	36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATTTTTAGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	106121999	106139028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ENSMUSG00000020705.7_106122043_106129399_1	chr11	+	662	6	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	14239	9593	14239	-9593	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGCCGATCGAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	106122042	106129399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333
ENSMUSG00000020705.7_106122050_106139093_1	chr11	+	2328	13	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	14246	-101	14246	101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCCCCTGCCCTTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	106122049	106139093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ENSMUSG00000020705.7_106125777_106139349_1	chr11	+	2322	11	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	17973	-357	17973	357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTTTTTTCTTAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	106125776	106139349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ENSMUSG00000020705.7_106126510_106139462_1	chr11	+	2337	10	ISM	ENSMUSG00000020705.7	ENST00000583590.5	3798	18	18721	381	18706	-381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGACTGTTTCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	106126509	106139462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ENSMUSG00000020705.7_106127822_106139639_1	chr11	+	2413	9	ISM	ENSMUSG00000020705.7	ENST00000583590.5	3798	18	20033	204	20018	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTCTATTTGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	106127821	106139639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ENSMUSG00000020705.7_106130848_106139834_1	chr11	+	2312	6	ISM	ENSMUSG00000020705.7	ENST00000583590.5	3798	18	23059	9	23044	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGGACCTGAGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	106130847	106139834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ENSMUSG00000020705.7_106132528_106138440_1	chr11	+	689	5	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	24724	552	24724	-552	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGGGCCATAATAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	106132527	106138440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ENSMUSG00000020705.7_106133863_106138690_1	chr11	+	651	4	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	26059	302	26059	-302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGGTGGGCGCCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	106133862	106138690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106133928_106136152_106136264_106137601_106137704_106138317
ENSMUSG00000020705.7_106137630_106138873_1	chr11	+	630	2	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	29826	119	29826	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCCCAAGGTGGATAGC	NA	NA	NA	NA	NA	NA	NA	NA	106137629	106138873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106137704_106138317
ENSMUSG00000020706.14_106140338_106141524_1	chr11	-	707	6	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	5381	370	5381	-370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCAAGGTAGTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	106141524	106140337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387
ENSMUSG00000020706.14_106140408_106141547_1	chr11	-	660	6	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	5358	440	5358	-440	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTCACTTATGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	106141547	106140407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387
ENSMUSG00000020706.14_106140725_106141849_1	chr11	-	737	5	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	5056	757	5056	-757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCCAAGGCCAGAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	106141849	106140724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731
ENSMUSG00000020706.14_106140980_106142029_1	chr11	-	630	5	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	4876	1012	4876	-1012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGGGCAGCACACTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	106142029	106140979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979
ENSMUSG00000020706.14_106141018_106142102_1	chr11	-	665	5	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	4803	1050	4803	-1050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCAAAGAGAGACCTCATA	NA	NA	NA	NA	NA	NA	NA	NA	106142102	106141017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979
ENSMUSG00000020706.14_106141215_106143076_1	chr11	-	668	5	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	3829	1247	3829	-1247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGGATGGGTTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	106143076	106141214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028
ENSMUSG00000020706.14_106141469_106143280_1	chr11	-	657	5	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	3625	1501	3625	-1501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCTGTCACTGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	106143280	106141468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253
ENSMUSG00000020706.14_106141515_106143380_1	chr11	-	711	5	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	3525	1547	3525	-1547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCCAGAATGAGGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	106143380	106141514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253
ENSMUSG00000020706.14_106141575_106143395_1	chr11	-	666	5	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	3510	1607	3510	-1607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGCCAACAGATCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	106143395	106141574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253
ENSMUSG00000020706.14_106141731_106143572_1	chr11	-	668	5	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	3333	1763	3333	-1763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCTAGGGAGACTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	106143572	106141730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491
ENSMUSG00000020706.14_106142130_106144165_1	chr11	-	656	7	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	2740	2162	2740	-2162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCAGACACCTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	106144165	106142129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114
ENSMUSG00000020706.14_106143092_106144351_1	chr11	-	670	7	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	2554	3124	2554	-3124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTATTGCAGATGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	106144351	106143091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307
ENSMUSG00000020706.14_106143303_106144459_1	chr11	-	656	6	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	2446	3335	2446	-3335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGGACTCTGGCAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	106144459	106143302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307
ENSMUSG00000020706.14_106143755_106145489_1	chr11	-	645	6	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	1416	3787	1416	-3787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAGTGCTGGGGCGAAA	NA	NA	NA	NA	NA	NA	NA	NA	106145489	106143754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432
ENSMUSG00000020706.14_106144202_106146503_1	chr11	-	650	7	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	402	4234	402	-4234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTTTGATCCCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	106146503	106144201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410
ENSMUSG00000020706.14_106144367_106146726_1	chr11	-	702	7	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	179	4399	179	-4399	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCACGAAGCCCCAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	106146726	106144366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ENSMUSG00000020706.14_106144448_106146758_1	chr11	-	653	7	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	147	4480	147	-4480	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTCATCACAAAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	106146758	106144447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ENSMUSG00000020706.14_106144621_106146905_1	chr11	-	712	6	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	0	4653	0	-4653	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTAGTTGGGTCCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	106146905	106144620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ENSMUSG00000020707.7_80074786_80090045_1	chr11	+	1337	5	FSM	ENSMUSG00000020707.7	ENSMUST00000017839.3	1984	5	109	538	109	-538	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGATCACTGCAAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	80074785	80090045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_80075082_80080049_80080194_80084711_80084875_80087698_80087774_80089386
ENSMUSG00000020707.7_80080085_80090360_1	chr11	+	1321	4	ISM	ENSMUSG00000020707.7	ENSMUST00000017839.3	1984	5	5408	223	5408	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCACCCCCAGTTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	80080084	80090360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80080194_80084711_80084875_80087698_80087774_80089386
ENSMUSG00000020707.7_80080132_80090417_1	chr11	+	1331	4	ISM	ENSMUSG00000020707.7	ENSMUST00000017839.3	1984	5	5455	166	5455	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATATGCTATATATGTC	NA	NA	NA	NA	NA	NA	NA	NA	80080131	80090417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80080194_80084711_80084875_80087698_80087774_80089386
ENSMUSG00000020707.7_80084784_80090583_1	chr11	+	1363	3	ISM	ENSMUSG00000020707.7	ENSMUST00000017839.3	1984	5	10107	0	10107	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGAGTTCATTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	80084783	80090583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80084875_80087698_80087774_80089386
ENSMUSG00000020708.13_106147671_106153946_1	chr11	+	1195	9	NNC	ENSMUSG00000020708.13	novel	1136	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACAACTCCAGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	106147670	106153946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153173_106153406_106153518_106153622_106153710_106153836
ENSMUSG00000020708.13_106147671_106153946_2	chr11	+	1190	9	NNC	ENSMUSG00000020708.13	novel	1136	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACAACTCCAGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	106147670	106153946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152950_106153173_106153406_106153518_106153622_106153710_106153834
ENSMUSG00000020708.13_106147671_106153946_3	chr11	+	1191	9	NNC	ENSMUSG00000020708.13	novel	1136	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1810	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACAACTCCAGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	106147670	106153946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153173_106153406_106153512_106153622_106153710_106153834
ENSMUSG00000020708.13_106147671_106153946_4	chr11	+	1195	9	NNC	ENSMUSG00000020708.13	novel	1136	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACAACTCCAGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	106147670	106153946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153173_106153406_106153518_106153624_106153710_106153834
ENSMUSG00000020708.13_106147671_106153946_5	chr11	+	1196	9	NNC	ENSMUSG00000020708.13	novel	1136	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACAACTCCAGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	106147670	106153946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153173_106153407_106153518_106153622_106153710_106153834
ENSMUSG00000020708.13_106147671_106153946_6	chr11	+	1197	9	FSM	ENSMUSG00000020708.13	ENST00000589763.1	1136	9	0	-61	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACAACTCCAGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	106147670	106153946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153173_106153406_106153518_106153622_106153710_106153834
ENSMUSG00000020708.13_106147723_106153946_1	chr11	+	1145	9	FSM	ENSMUSG00000020708.13	ENST00000589763.1	1136	9	52	-61	52	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACAACTCCAGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	106147722	106153946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153173_106153406_106153518_106153622_106153710_106153834
ENSMUSG00000020708.13_106152345_106153460_1	chr11	+	663	5	ISM	ENSMUSG00000020708.13	ENSMUST00000021049.9	1316	11	5365	486	4674	-425	internal_fragment	FALSE	canonical	NA	NA	NA	NA	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACCTGAGGAAAATTGC	NA	NA	NA	NA	NA	NA	NA	NA	106152344	106153460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406
ENSMUSG00000020708.13_106152487_106153649_1	chr11	+	605	6	ISM	ENSMUSG00000020708.13	ENSMUST00000021049.9	1316	11	5507	297	4816	-236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCGGGAACGGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	106152486	106153649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153622
ENSMUSG00000020716.17_79302322_79325746_1	chr11	+	448	4	FSM	ENSMUSG00000020716.17	ENST00000457709.1	446	4	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTATATGGATTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	79302321	79325746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_79302496_79302880_79303004_79303509_79303585_79325670
ENSMUSG00000020716.17_79331737_79334759_1	chr11	+	510	4	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	27	29538	27	9015	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTAGCGACATACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	79331736	79334759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79331924_79332454_79332529_79332716_79332801_79334594
ENSMUSG00000020716.17_79331789_79334808_1	chr11	+	507	4	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	79	29489	79	9064	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTATGATTTCTGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	79331788	79334808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79331924_79332454_79332529_79332716_79332801_79334594
ENSMUSG00000020716.17_79331846_79334857_1	chr11	+	499	4	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	136	29440	136	9113	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGATTTATGGACCGGC	NA	NA	NA	NA	NA	NA	NA	NA	79331845	79334857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79331924_79332454_79332529_79332716_79332801_79334594
ENSMUSG00000020716.17_79332757_79335479_1	chr11	+	539	3	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	1047	28818	1047	9735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCTACTGGATAATCA	NA	NA	NA	NA	NA	NA	NA	NA	79332756	79335479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79332801_79334594_79335036_79335425
ENSMUSG00000020716.17_79334701_79335891_1	chr11	+	517	3	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	2991	28406	2991	10147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAAATTGTGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	79334700	79335891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79335036_79335425_79335566_79335849
ENSMUSG00000020716.17_79334898_79337657_1	chr11	+	511	5	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	3188	26640	3188	11913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTAGTTTCTCTCCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	79334897	79337657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79335036_79335425_79335566_79335849_79335973_79336541_79336626_79337631
ENSMUSG00000020716.17_79334954_79337706_1	chr11	+	504	5	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	3244	26591	3244	11962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTGGAGCTGATGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	79334953	79337706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79335036_79335425_79335566_79335849_79335973_79336541_79336626_79337631
ENSMUSG00000020716.17_79335477_79338395_1	chr11	+	499	5	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	3767	25902	3767	12651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCGGAGGCTGGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	79335476	79338395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79335566_79335849_79335973_79336541_79336626_79337631_79337749_79338309
ENSMUSG00000020716.17_79335524_79338455_1	chr11	+	512	5	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	3814	25842	3814	12711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTAATGTGGACAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	79335523	79338455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79335566_79335849_79335973_79336541_79336626_79337631_79337749_79338309
ENSMUSG00000020716.17_79335910_79339008_1	chr11	+	504	5	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	4200	25289	4200	13264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCTTCAACAAGGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	79335909	79339008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79335973_79336541_79336626_79337631_79337749_79338309_79338492_79338950
ENSMUSG00000020716.17_79335954_79339070_1	chr11	+	522	5	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	4244	25227	4244	13326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTTGTGGAACTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	79335953	79339070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79335973_79336541_79336626_79337631_79337749_79338309_79338492_79338950
ENSMUSG00000020716.17_79337687_79344682_1	chr11	+	510	4	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	5977	19615	5977	18938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGCTCTGGAACATGTT	NA	NA	NA	NA	NA	NA	NA	NA	79337686	79344682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79337749_79338309_79338492_79338950_79339163_79344628
ENSMUSG00000020716.17_79337733_79344738_1	chr11	+	520	4	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	6023	19559	6023	18994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTCGAGGCAACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	79337732	79344738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79337749_79338309_79338492_79338950_79339163_79344628
ENSMUSG00000020716.17_79338417_79345028_1	chr11	+	553	4	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	6707	19269	6707	-19269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCATCTTGTCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	79338416	79345028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79338492_79338950_79339163_79344628_79344791_79344924
ENSMUSG00000020716.17_79338979_79359631_1	chr11	+	539	4	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	7269	4666	7269	-4666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAAGCAGGGATTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	79338978	79359631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79339163_79344628_79344791_79344924_79345029_79359542
ENSMUSG00000020716.17_79339128_79360644_1	chr11	+	506	5	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	7418	3653	7418	-3653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGAGACCTTTTAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	79339127	79360644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79339163_79344628_79344791_79344924_79345029_79359542_79359702_79360598
ENSMUSG00000020716.17_79344666_79362285_1	chr11	+	511	5	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	12956	2012	12956	-2012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCCACAAGTGATGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	79344665	79362285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79344791_79344924_79345029_79359542_79359702_79360598_79360697_79362260
ENSMUSG00000020716.17_79344721_79362337_1	chr11	+	508	5	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	13011	1960	13011	-1960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTTGCTTTACATCGG	NA	NA	NA	NA	NA	NA	NA	NA	79344720	79362337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79344791_79344924_79345029_79359542_79359702_79360598_79360697_79362260
ENSMUSG00000020716.17_79344773_79362389_1	chr11	+	508	5	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	13063	1908	13063	-1908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTTCCAGTAACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	79344772	79362389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79344791_79344924_79345029_79359542_79359702_79360598_79360697_79362260
ENSMUSG00000020716.17_79344983_79364238_1	chr11	+	534	5	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	13273	59	13273	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGATACACACTGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	79344982	79364238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_79345029_79359542_79359702_79360598_79360697_79362260_79362408_79364154
ENSMUSG00000020718.13_106659246_106664473_1	chr11	-	287	4	ISM	ENSMUSG00000020718.13	ENST00000539111.7	1287	8	5677	141	5677	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGGGCTAATCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	106664473	106659245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420
ENSMUSG00000020718.13_106664209_106666318_1	chr11	-	290	3	ISM	ENSMUSG00000020718.13	ENST00000539111.7	1287	8	3832	5104	3832	-5104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCACGACTTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	106666318	106664208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106664292_106664420_106664562_106666252
ENSMUSG00000020718.13_106664515_106668013_1	chr11	-	266	3	ISM	ENSMUSG00000020718.13	ENST00000539111.7	1287	8	2137	5410	2137	-5410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACGTAGACCTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	106668013	106664514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106664562_106666252_106666427_106667968
ENSMUSG00000020718.13_106666341_106668362_1	chr11	-	294	3	ISM	ENSMUSG00000020718.13	ENSMUST00000021060.6	1506	8	1979	7262	1788	-7236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGGAAAGGAGCCAATAG	NA	NA	NA	NA	NA	NA	NA	NA	106668362	106666340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106666427_106667968_106668075_106668260
ENSMUSG00000020718.13_106668012_106669876_1	chr11	-	282	3	ISM	ENSMUSG00000020718.13	ENSMUST00000021060.6	1506	8	465	8933	274	-8907	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGATTTCTGGTTGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	106669876	106668011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106668075_106668260_106668388_106669784
ENSMUSG00000020718.13_106668052_106669951_1	chr11	-	317	3	ISM	ENSMUSG00000020718.13	ENSMUST00000021060.6	1506	8	390	8973	199	-8947	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTATGGTTTACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	106669951	106668051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106668075_106668260_106668388_106669784
ENSMUSG00000020718.13_106668328_106670002_1	chr11	-	278	2	ISM	ENSMUSG00000020718.13	ENST00000539111.7	1287	8	148	9223	148	-9223	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCAGATTGGAGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	106670002	106668327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106668388_106669784
ENSMUSG00000020719.15_106671181_106674988_1	chr11	-	2249	4	ISM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	4370	0	4370	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCATTTATTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	106674988	106671180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926
ENSMUSG00000020719.15_106671525_106675878_1	chr11	-	2189	6	ISM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	3480	344	3480	-344	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATGTTAAAACAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	106675878	106671524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705
ENSMUSG00000020719.15_106671679_106676047_1	chr11	-	2121	7	ISM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	3311	498	3311	-498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACCAGCAAACAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	106676047	106671678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961
ENSMUSG00000020719.15_106671894_106676920_1	chr11	-	2151	9	ISM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	2438	713	2438	-713	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTAGGTTCCTAGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	106676920	106671893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892
ENSMUSG00000020719.15_106672142_106677296_1	chr11	-	2098	11	ISM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	2062	961	2062	-961	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCATTTTTCAGTATC	NA	NA	NA	NA	NA	NA	NA	NA	106677296	106672141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273
ENSMUSG00000020719.15_106672186_106677354_1	chr11	-	2112	11	ISM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	2004	1005	2004	-1005	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGACAATGGATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	106677354	106672185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273
ENSMUSG00000020719.15_106672257_106677810_1	chr11	-	2133	12	ISM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	1548	1076	1548	-1076	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCCCATTCCTGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	106677810	106672256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734
ENSMUSG00000020719.15_106672566_106679293_1	chr11	-	2103	13	NNC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	65	-1385	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGCAGTAATTATGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	106679293	106672565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_106673083_106673300_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ENSMUSG00000020719.15_106672566_106679293_2	chr11	-	2109	13	FSM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	65	1385	65	-1385	multi-exon	FALSE	canonical	NA	NA	NA	NA	1597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGCAGTAATTATGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	106679293	106672565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ENSMUSG00000020720.14_107370354_107388632_1	chr11	+	1493	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	44	367	0	73	multi-exon	FALSE	canonical	NA	NA	NA	NA	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTTTCTTACTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	107370353	107388632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ENSMUSG00000020720.14_107370403_107388691_1	chr11	+	1503	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	93	308	0	132	multi-exon	FALSE	canonical	NA	NA	NA	NA	1778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCCTCTGCCTTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	107370402	107388691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ENSMUSG00000020720.14_107370403_107388746_1	chr11	+	1558	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	93	253	0	187	multi-exon	FALSE	canonical	NA	NA	NA	NA	2823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTCTGAAGACAGAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	107370402	107388746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ENSMUSG00000020720.14_107376418_107388891_1	chr11	+	1553	10	ISM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	6108	108	6015	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATAAAGGATTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	107376417	107388891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ENSMUSG00000020720.14_107376534_107388999_1	chr11	+	1643	9	ISM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	6224	0	6131	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGCGTGGAGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	107376533	107388999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ENSMUSG00000020722.6_107594044_107607348_1	chr11	-	1244	4	NNC	ENSMUSG00000020722.6	novel	1249	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTTTCCCATATGCC	NA	NA	NA	NA	NA	NA	NA	NA	107607348	107594043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_107594717_107595130_107595269_107596602_107596673_107606985
ENSMUSG00000020722.6_107594044_107607348_2	chr11	-	1242	4	NNC	ENSMUSG00000020722.6	novel	1249	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTTTCCCATATGCC	NA	NA	NA	NA	NA	NA	NA	NA	107607348	107594043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_107594717_107595130_107595262_107596602_107596678_107606985
ENSMUSG00000020733.4_115054167_115071555_1	chr11	+	1473	6	FSM	ENSMUSG00000020733.4	ENSMUST00000021077.4	1925	6	0	452	0	-452	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAAAGTGTCCCCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	115054166	115071555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115054778_115067176_115067339_115068049_115068204_115069875_115069917_115070832_115070923_115071140
ENSMUSG00000020733.4_115054403_115071700_1	chr11	+	1382	6	FSM	ENSMUSG00000020733.4	ENSMUST00000021077.4	1925	6	236	307	236	-307	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGTGCACAATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	115054402	115071700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115054778_115067176_115067339_115068049_115068204_115069875_115069917_115070832_115070923_115071140
ENSMUSG00000020733.4_115054557_115071829_1	chr11	+	1357	6	FSM	ENSMUSG00000020733.4	ENSMUST00000021077.4	1925	6	390	178	390	-178	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCCTGGTCGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	115054556	115071829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115054778_115067176_115067339_115068049_115068204_115069875_115069917_115070832_115070923_115071140
ENSMUSG00000020733.4_115067176_115072009_1	chr11	+	1317	5	ISM	ENSMUSG00000020733.4	ENSMUST00000021077.4	1925	6	13009	-2	13009	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGTGTCCTCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	115067175	115072009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115067339_115068049_115068204_115069875_115069917_115070832_115070923_115071140
ENSMUSG00000020736.13_115381246_115381795_1	chr11	-	467	2	ISM	ENSMUSG00000020736.13	ENSMUST00000106530.8	836	5	846	0	846	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGATCTTTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	115381795	115381245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115381596_115381678
ENSMUSG00000020736.13_115381246_115382677_1	chr11	-	841	5	NNC	ENSMUSG00000020736.13	novel	858	5	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGATCTTTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	115382677	115381245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_115381565_115381678_115381794_115381963_115382025_115382096_115382198_115382432
ENSMUSG00000020736.13_115381246_115382677_2	chr11	-	840	5	NNC	ENSMUSG00000020736.13	novel	858	5	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGATCTTTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	115382677	115381245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_115381571_115381678_115381794_115381963_115382018_115382096_115382198_115382432
ENSMUSG00000020737.13_115388179_115405204_1	chr11	-	1353	4	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGTGTTTTGTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	115405204	115388178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_115389126_115392824_115392929_115393857_115394001_115405045
ENSMUSG00000020737.13_115388179_115405204_4	chr11	-	1364	4	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	9198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGTGTTTTGTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	115405204	115388178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_115389126_115392813_115392929_115393857_115394001_115405045
ENSMUSG00000020739.12_115455351_115460854_1	chr11	+	510	7	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	91	13957	91	-13957	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCCGACTGCACGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	115455350	115460854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824
ENSMUSG00000020739.12_115456047_115468811_1	chr11	+	553	7	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	787	6000	787	-6000	internal_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCTGATGCCAACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	115456046	115468811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755
ENSMUSG00000020739.12_115457573_115469032_1	chr11	+	502	7	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	2313	5779	2313	-5779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTGGCGTGAGGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	115457572	115469032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989
ENSMUSG00000020739.12_115459519_115469339_1	chr11	+	505	6	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	4259	5472	4259	-5472	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGAGCAGAAGGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	115459518	115469339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314
ENSMUSG00000020739.12_115460526_115469446_1	chr11	+	584	5	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	5266	5365	5266	-5365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACATAGTGACAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	115460525	115469446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314
ENSMUSG00000020739.12_115460941_115469722_1	chr11	+	503	5	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	5681	5089	5681	-5089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGATACCCCTCATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	115460940	115469722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615
ENSMUSG00000020739.12_115468810_115471413_1	chr11	+	527	5	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	13550	3398	13550	-3398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGGCCAGATGCACT	NA	NA	NA	NA	NA	NA	NA	NA	115468809	115471413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329
ENSMUSG00000020739.12_115469058_115471798_1	chr11	+	496	6	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	13798	3013	13798	-3013	internal_fragment	TRUE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTTGGAGCTGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	115469057	115471798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746
ENSMUSG00000020739.12_115469389_115472669_1	chr11	+	569	6	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	14129	2142	14129	-2142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCGTATCTGACAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	115469388	115472669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567
ENSMUSG00000020739.12_115469421_115472685_1	chr11	+	553	6	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	14161	2126	14161	-2126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGAGGCTTTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	115469420	115472685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567
ENSMUSG00000020739.12_115469673_115472860_1	chr11	+	566	6	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	14413	1951	14413	-1951	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTGAGTCTTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	115469672	115472860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764
ENSMUSG00000020739.12_115471330_115473739_1	chr11	+	558	6	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	16070	1072	16070	-1072	internal_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTTTGGTGACGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	115471329	115473739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702
ENSMUSG00000020739.12_115471767_115474167_1	chr11	+	519	5	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	16507	644	16507	-644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGACATATGAGCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	115471766	115474167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151
ENSMUSG00000020739.12_115471830_115474209_1	chr11	+	498	5	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	16570	602	16570	-602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGAGGCCAGAGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	115471829	115474209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151
ENSMUSG00000020739.12_115472574_115474609_1	chr11	+	530	5	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	17314	202	17314	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGGCAATTATAAGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	115472573	115474609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ENSMUSG00000020739.12_115473702_115474811_1	chr11	+	520	3	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	18442	0	18442	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGATGGATGTTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	115473701	115474811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115473855_115474151_115474254_115474546
ENSMUSG00000020740.14_115475716_115478272_1	chr11	-	698	5	ISM	ENSMUSG00000020740.14	ENST00000578348.5	2150	15	7548	72	7548	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACACAGTATGTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	115478272	115475715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115475886_115476911_115477023_115477141_115477312_115477821_115478028_115478231
ENSMUSG00000020740.14_115475808_115478316_1	chr11	-	650	5	ISM	ENSMUSG00000020740.14	ENST00000578348.5	2150	15	7504	164	7504	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATGAAATAAACTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	115478316	115475807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115475886_115476911_115477023_115477141_115477312_115477821_115478028_115478231
ENSMUSG00000020740.14_115475857_115478384_1	chr11	-	669	5	ISM	ENSMUSG00000020740.14	ENST00000578348.5	2150	15	7436	213	7436	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACCTCCTGCAGTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	115478384	115475856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115475886_115476911_115477023_115477141_115477312_115477821_115478028_115478231
ENSMUSG00000020740.14_115476992_115478503_1	chr11	-	679	4	ISM	ENSMUSG00000020740.14	ENST00000578348.5	2150	15	7317	1348	7317	-1348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGAACTTTCCCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	115478503	115476991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115477023_115477141_115477312_115477821_115478028_115478231
ENSMUSG00000020740.14_115477263_115479178_1	chr11	-	675	5	ISM	ENSMUSG00000020740.14	ENST00000578348.5	2150	15	6642	1619	6642	-1619	internal_fragment	TRUE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCACTTTGCTAAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	115479178	115477262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137
ENSMUSG00000020740.14_115477877_115479302_1	chr11	-	695	4	ISM	ENSMUSG00000020740.14	ENST00000578348.5	2150	15	6518	2233	6518	-2233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCAGAGCTCTCCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	115479302	115477876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115478028_115478231_115478543_115478761_115478830_115479137
ENSMUSG00000020740.14_115477939_115479345_1	chr11	-	676	4	ISM	ENSMUSG00000020740.14	ENST00000578348.5	2150	15	6475	2295	6475	-2295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCCTTCTCCACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	115479345	115477938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115478028_115478231_115478543_115478761_115478830_115479137
ENSMUSG00000020740.14_115478268_115479774_1	chr11	-	670	4	ISM	ENSMUSG00000020740.14	ENST00000578348.5	2150	15	6046	2624	6046	-2624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCCTTGATCAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	115479774	115478267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115478543_115478761_115478830_115479137_115479372_115479681
ENSMUSG00000020740.14_115478411_115481279_1	chr11	-	691	6	ISM	ENSMUSG00000020740.14	ENST00000578348.5	2150	15	4541	2767	4541	-2767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGCTCCTGTGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	115481279	115478410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221
ENSMUSG00000020740.14_115479143_115482119_1	chr11	-	678	6	ISM	ENSMUSG00000020740.14	ENST00000578348.5	2150	15	3701	3499	3701	-3499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTACGCCCAAGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	115482119	115479142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088
ENSMUSG00000020740.14_115479303_115482579_1	chr11	-	715	7	ISM	ENSMUSG00000020740.14	ENST00000578348.5	2150	15	3241	3659	3241	-3659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGGCATTGGCCCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	115482579	115479302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455
ENSMUSG00000020741.18_74547412_74554259_1	chr11	+	1752	10	ISM	ENSMUSG00000020741.18	ENST00000570628.6	5185	25	152	7414	152	-6472	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGTGGAGACCACCACCT	NA	NA	NA	NA	NA	NA	NA	NA	74547411	74554259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205
ENSMUSG00000020741.18_74550006_74555752_1	chr11	+	2078	11	ISM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	9665	5921	2746	-4979	internal_fragment	TRUE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGGGGCTTGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	74550005	74555752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599
ENSMUSG00000020741.18_74551263_74556570_1	chr11	+	1797	10	ISM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	10922	5103	4003	-4161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCGGGAGATCTCACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	74551262	74556570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518
ENSMUSG00000020741.18_74551563_74556829_1	chr11	+	1775	10	ISM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	11222	4844	4303	-3902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAGCATGTCAACCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	74551562	74556829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748
ENSMUSG00000020741.18_74552373_74557064_1	chr11	+	1762	10	ISM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	12032	4609	5113	-3667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCTGTCTGCGTCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	74552372	74557064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980
ENSMUSG00000020741.18_74552566_74558007_1	chr11	+	1788	12	ISM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	12225	3666	5306	-2724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGTTTGGGGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	74552565	74558007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925
ENSMUSG00000020741.18_74552860_74560283_1	chr11	+	2006	17	ISM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	12519	1390	5600	-448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGCTCCAAGAGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	74552859	74560283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ENSMUSG00000020741.18_74556547_74561005_1	chr11	+	1748	10	ISM	ENSMUSG00000020741.18	ENST00000570628.6	5185	25	9287	668	9287	274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGATTGGGCCTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	74556546	74561005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ENSMUSG00000020741.18_74556782_74561142_1	chr11	+	1795	9	ISM	ENSMUSG00000020741.18	ENST00000570628.6	5185	25	9522	531	9522	411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCTGTACCCCAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	74556781	74561142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ENSMUSG00000020741.18_74556855_74561172_1	chr11	+	1752	9	ISM	ENSMUSG00000020741.18	ENST00000570628.6	5185	25	9595	501	9595	441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGCCAACAGTCTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	74556854	74561172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ENSMUSG00000020741.18_74557965_74561481_1	chr11	+	1753	6	ISM	ENSMUSG00000020741.18	ENST00000570628.6	5185	25	10705	192	10705	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTAGGCAGAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	74557964	74561481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ENSMUSG00000020741.18_74558176_74561673_1	chr11	+	1825	5	ISM	ENSMUSG00000020741.18	ENST00000570628.6	5185	25	10916	0	10916	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	74558175	74561673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ENSMUSG00000020743.16_115498744_115503656_1	chr11	-	1233	6	FSM	ENSMUSG00000020743.16	ENSMUST00000021087.14	1372	6	139	0	48	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	115503656	115498743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503610
ENSMUSG00000020743.16_115499243_115500426_2	chr11	-	352	3	FSM	ENSMUSG00000020743.16	ENST00000580571.5	727	3	50	325	50	-34	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTATTACTACAGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	115500426	115499242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115499440_115499886_115499980_115500364
ENSMUSG00000020744.14_115505879_115508491_1	chr11	-	818	3	ISM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	10480	875	10480	-869	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCTAACCTATACAACTT	NA	NA	NA	NA	NA	NA	NA	NA	115508491	115505878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115506418_115507346_115507478_115508343
ENSMUSG00000020744.14_115506266_115515085_1	chr11	-	855	6	ISM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	3886	1262	3886	-1256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCACTGCATAAGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	115515085	115506265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024
ENSMUSG00000020744.14_115507375_115518919_1	chr11	-	813	6	ISM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	52	2371	52	-2365	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAACATGCCCGGTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	115518919	115507374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518890
ENSMUSG00000020745.16_74567320_74570336_1	chr11	-	1302	2	ISM	ENSMUSG00000020745.16	ENSMUST00000102520.9	5789	11	44348	2544	44348	-2536	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCTAAAACTTACGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	74570336	74567319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_74568569_74570283
ENSMUSG00000020745.16_74567481_74573144_1	chr11	-	1329	3	ISM	ENSMUSG00000020745.16	ENSMUST00000102520.9	5789	11	41540	2705	41540	-2697	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAAGCGTGCATAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	74573144	74567480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_74568569_74570283_74570441_74573060
ENSMUSG00000020745.16_74567680_74574485_1	chr11	-	1349	4	ISM	ENSMUSG00000020745.16	ENSMUST00000102520.9	5789	11	40199	2904	40199	-2896	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCCCATTGAGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	74574485	74567679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284
ENSMUSG00000020745.16_74567732_74575253_1	chr11	-	1347	5	ISM	ENSMUSG00000020745.16	ENSMUST00000102520.9	5789	11	39431	2956	39431	-2948	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTCCAGACTGTTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	74575253	74567731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231
ENSMUSG00000020745.16_74567798_74575303_1	chr11	-	1331	5	ISM	ENSMUSG00000020745.16	ENSMUST00000102520.9	5789	11	39381	3022	39381	-3014	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGTAAACAGGTCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	74575303	74567797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231
ENSMUSG00000020745.16_74567878_74575334_1	chr11	-	1282	5	ISM	ENSMUSG00000020745.16	ENSMUST00000102520.9	5789	11	39350	3102	39350	-3094	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGTAAGAAAATGATCG	NA	NA	NA	NA	NA	NA	NA	NA	74575334	74567877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231
ENSMUSG00000020745.16_74568070_74579897_1	chr11	-	1354	7	ISM	ENSMUSG00000020745.16	ENSMUST00000102520.9	5789	11	34787	3294	34787	-3286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATCTATGTAACATCA	NA	NA	NA	NA	NA	NA	NA	NA	74579897	74568069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802
ENSMUSG00000020745.16_74568243_74590222_1	chr11	-	1379	8	ISM	ENSMUSG00000020745.16	ENST00000674717.1	5019	9	24659	3459	24462	-3459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCTACAAGGGCAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	74590222	74568242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74590136
ENSMUSG00000020745.16_74568322_74590249_1	chr11	-	1327	8	ISM	ENSMUSG00000020745.16	ENST00000674717.1	5019	9	24632	3538	24435	-3538	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTATACTGTAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	74590249	74568321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74590136
ENSMUSG00000020745.16_74568473_74614878_1	chr11	-	1327	9	FSM	ENSMUSG00000020745.16	ENST00000674717.1	5019	9	3	3689	3	-3689	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTTTTCCTCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	74614878	74568472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74590136_74590347_74614824
ENSMUSG00000020747.19_115676266_115689175_1	chr11	+	4049	30	ISM	ENSMUSG00000020747.19	ENST00000375248.9	4401	31	4739	89	4739	-89	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGCCATGGTGGCCATA	NA	NA	NA	NA	NA	NA	NA	NA	115676265	115689175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681149_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ENSMUSG00000020747.19_115678301_115689657_1	chr11	+	4033	27	ISM	ENSMUSG00000020747.19	ENST00000375248.9	4401	31	6774	-393	6774	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCACCTCACCCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	115678300	115689657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681149_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ENSMUSG00000020747.19_115679780_115690049_1	chr11	+	4071	24	ISM	ENSMUSG00000020747.19	ENST00000375248.9	4401	31	8253	-785	8253	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTAATAGTTACAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	115679779	115690049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681149_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ENSMUSG00000020747.19_115680086_115690192_1	chr11	+	4120	23	ISM	ENSMUSG00000020747.19	ENST00000375248.9	4401	31	8559	-928	8559	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATTTCTCTCTGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	115680085	115690192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115680187_115680444_115680502_115680750_115680856_115680995_115681149_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ENSMUSG00000020755.10_115824108_115854848_1	chr11	+	1134	10	ISM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	0	2703	0	-2703	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGGTACAGGCTGCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	115824107	115854848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768
ENSMUSG00000020755.10_115824295_115855220_1	chr11	+	1136	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	187	2331	187	-2331	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGATGCCCCAGGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	115824294	115855220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ENSMUSG00000020755.10_115824399_115855274_1	chr11	+	1086	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	291	2277	291	-2277	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTCCAGTAGCTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	115824398	115855274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ENSMUSG00000020755.10_115824500_115855446_1	chr11	+	1157	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	392	2105	392	-2105	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACCCAATTAAAAGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	115824499	115855446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ENSMUSG00000020755.10_115826231_115855559_1	chr11	+	1123	10	ISM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	2123	1992	2123	-1992	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTCAGGATGAACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	115826230	115855559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ENSMUSG00000020755.10_115848247_115855784_1	chr11	+	1126	7	ISM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	24139	1767	24139	-1767	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAACACTCCCTACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	115848246	115855784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ENSMUSG00000020755.10_115851389_115855930_1	chr11	+	1180	6	ISM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	27281	1621	27281	-1621	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGAGTGTGGCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	115851388	115855930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ENSMUSG00000020766.5_115899283_115901474_1	chr11	-	976	6	ISM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	2071	0	2030	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTTCCTACTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	115901474	115899282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388
ENSMUSG00000020766.5_115899418_115901874_1	chr11	-	897	7	ISM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	1671	135	1630	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCGCAGCTCTGCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	115901874	115899417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852
ENSMUSG00000020766.5_115899466_115901927_1	chr11	-	902	7	ISM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	1618	183	1577	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTGAGACCGATGGACG	NA	NA	NA	NA	NA	NA	NA	NA	115901927	115899465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852
ENSMUSG00000020766.5_115899474_115901934_1	chr11	-	901	7	ISM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	1611	191	1570	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGTGTCCCTGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	115901934	115899473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852
ENSMUSG00000020766.5_115899510_115901985_1	chr11	-	916	7	ISM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	1560	227	1519	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCAAGCTGCCGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	115901985	115899509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852
ENSMUSG00000020766.5_115899676_115903354_1	chr11	-	910	7	ISM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	191	393	150	-357	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	868	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTGGAGGCCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	115903354	115899675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
ENSMUSG00000020766.5_115899723_115903414_1	chr11	-	923	7	ISM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	131	440	90	-404	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	960	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGCAGTCGCATGACAG	NA	NA	NA	NA	NA	NA	NA	NA	115903414	115899722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
ENSMUSG00000020766.5_115899776_115903545_1	chr11	-	1001	7	ISM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	0	493	0	-457	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCCCTGAGCTGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	115903545	115899775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
ENSMUSG00000020773.12_115997356_116000498_1	chr11	-	852	6	FSM	ENSMUSG00000020773.12	ENSMUST00000021120.6	2204	6	574	778	565	-778	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTTCACACACTGCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	116000498	115997355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115997468_115997757_115997833_115998249_115998449_115998603_115998835_115999091_115999188_116000359
ENSMUSG00000020773.12_115997428_116000531_1	chr11	-	813	6	FSM	ENSMUSG00000020773.12	ENSMUST00000021120.6	2204	6	541	850	532	-850	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGCAGCTTTTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	116000531	115997427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115997468_115997757_115997833_115998249_115998449_115998603_115998835_115999091_115999188_116000359
ENSMUSG00000020773.12_115998324_116000721_1	chr11	-	814	4	ISM	ENSMUSG00000020773.12	ENSMUST00000106441.8	2192	6	342	1746	342	-1746	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCAGCCAGTGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	116000721	115998323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115998449_115998603_115998835_115999091_115999188_116000359
ENSMUSG00000020773.12_115998749_116001063_1	chr11	-	886	3	ISM	ENSMUSG00000020773.12	ENSMUST00000106441.8	2192	6	0	2171	0	-2171	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTTCATCGAAGAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	116001063	115998748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115998835_115999091_115999188_116000359
ENSMUSG00000020775.14_116022643_116029447_1	chr11	-	1253	8	ISM	ENSMUSG00000020775.14	ENSMUST00000106439.2	1411	9	247	0	247	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTCTTCACTTTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	116029447	116022642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267
ENSMUSG00000020775.14_116022747_116029649_2	chr11	-	1262	9	FSM	ENSMUSG00000020775.14	ENSMUST00000106439.2	1411	9	45	104	45	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAGCCAACTGAGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	116029649	116022746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267_116029448_116029536
ENSMUSG00000020775.14_116022757_116029601_1	chr11	-	1204	9	FSM	ENSMUSG00000020775.14	ENSMUST00000106439.2	1411	9	93	114	93	-114	multi-exon	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGCCATCTGAAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	116029601	116022756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267_116029448_116029536
ENSMUSG00000020775.14_116022840_116029631_1	chr11	-	1151	9	FSM	ENSMUSG00000020775.14	ENSMUST00000106439.2	1411	9	63	197	63	-197	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTATGGAATCTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	116029631	116022839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267_116029448_116029536
ENSMUSG00000020775.14_116022851_116029648_1	chr11	-	1157	9	FSM	ENSMUSG00000020775.14	ENSMUST00000106439.2	1411	9	46	208	46	-208	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCATGAGCCCACCTATG	NA	NA	NA	NA	NA	NA	NA	NA	116029648	116022850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267_116029448_116029536
ENSMUSG00000020777.17_116062714_116089555_2	chr11	-	3671	14	FSM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	316	0	72	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGTTACGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	116089555	116062713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
ENSMUSG00000020778.13_116089681_116106144_1	chr11	+	896	4	NNC	ENSMUSG00000020778.13	novel	902	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTGTGCTGATGCGG	NA	NA	NA	NA	NA	NA	NA	NA	116089680	116106144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_116089810_116095670_116095806_116096436_116096595_116105670
ENSMUSG00000020781.15_115705550_115713610_1	chr11	+	1669	11	FSM	ENSMUSG00000020781.15	ENSMUST00000021134.10	1979	11	0	310	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGCCAGCTGTCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	115705549	115713610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
ENSMUSG00000020781.15_115706012_115713809_1	chr11	+	1596	9	ISM	ENSMUSG00000020781.15	ENSMUST00000021134.10	1979	11	462	111	430	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGAGGCCCAGGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	115706011	115713809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
ENSMUSG00000020781.15_115706152_115713920_1	chr11	+	1655	8	ISM	ENSMUSG00000020781.15	ENSMUST00000021134.10	1979	11	602	0	570	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTCAATACTTACAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	115706151	115713920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
ENSMUSG00000020781.15_115711814_115712844_1	chr11	+	279	3	ISM	ENSMUSG00000020781.15	ENST00000680999.1	1815	11	6232	766	6232	-766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCAGATCAGCTTCGAT	NA	NA	NA	NA	NA	NA	NA	NA	115711813	115712844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115711951_115712420_115712543_115712824
ENSMUSG00000020781.15_115711870_115712892_1	chr11	+	271	3	ISM	ENSMUSG00000020781.15	ENST00000680999.1	1815	11	6288	718	6288	-718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCGAAAAAACAGCCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	115711869	115712892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115711951_115712420_115712543_115712824
ENSMUSG00000020781.15_115712421_115713426_1	chr11	+	257	3	ISM	ENSMUSG00000020781.15	ENST00000680999.1	1815	11	6839	184	6839	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTCTGCAGCCTCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	115712420	115713426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115712543_115712824_115712942_115713408
ENSMUSG00000020781.15_115712468_115713487_1	chr11	+	271	3	ISM	ENSMUSG00000020781.15	ENST00000680999.1	1815	11	6886	123	6886	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGGACCACGGTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	115712467	115713487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115712543_115712824_115712942_115713408
ENSMUSG00000020782.19_115725652_115736311_1	chr11	+	485	5	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	32	8811	32	-8811	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCACGCTGCACGACAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	115725651	115736311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199
ENSMUSG00000020782.19_115734192_115737814_1	chr11	+	474	5	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	8572	7308	8572	-7308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCAACCAAATCCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	115734191	115737814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746
ENSMUSG00000020782.19_115735712_115738057_1	chr11	+	448	4	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	10092	7065	10092	-7065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCACTGCCAGTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	115735711	115738057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115735777_115736199_115736359_115737746_115737910_115737996
ENSMUSG00000020782.19_115736301_115739047_1	chr11	+	445	5	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	10681	6075	10681	-6075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGCTATGGGGACCGCC	NA	NA	NA	NA	NA	NA	NA	NA	115736300	115739047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011
ENSMUSG00000020782.19_115737857_115740382_1	chr11	+	437	5	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	12237	4740	12237	-4740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGGTAGTCATTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	115737856	115740382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341
ENSMUSG00000020782.19_115738033_115740485_1	chr11	+	451	4	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	12413	4637	12413	-4637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACATCCCCCTGAAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	115738032	115740485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115738130_115738414_115738470_115739011_115739167_115740341
ENSMUSG00000020782.19_115739038_115740863_1	chr11	+	457	4	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	13418	4259	13418	-4259	internal_fragment	TRUE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTACGTCTGCTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	115739037	115740863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115739167_115740341_115740560_115740636_115740705_115740821
ENSMUSG00000020782.19_115739099_115740908_1	chr11	+	441	4	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	13479	4214	13479	-4214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGACACGGACCCCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	115739098	115740908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115739167_115740341_115740560_115740636_115740705_115740821
ENSMUSG00000020782.19_115740503_115741523_1	chr11	+	455	5	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	14883	3599	14883	-3599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCAGGAGGGTTACCGCT	NA	NA	NA	NA	NA	NA	NA	NA	115740502	115741523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452
ENSMUSG00000020782.19_115741501_115743010_1	chr11	+	458	3	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	15881	2112	15881	-2112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACGGAAGATTGAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	115741500	115743010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115741746_115741833_115741985_115742948
ENSMUSG00000020782.19_115741652_115743917_1	chr11	+	457	4	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	16032	1205	16032	-1205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGCGTGCCTCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	115741651	115743917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115741746_115741833_115741985_115742948_115743100_115743856
ENSMUSG00000020782.19_115741829_115744174_1	chr11	+	505	4	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	16209	948	16209	-948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGGAAGTCGCCCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	115741828	115744174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115741985_115742948_115743100_115743856_115743974_115744093
ENSMUSG00000020782.19_115741909_115744209_1	chr11	+	460	4	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	16289	913	16289	-913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGCAAGGGAGCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	115741908	115744209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115741985_115742948_115743100_115743856_115743974_115744093
ENSMUSG00000020782.19_115741965_115744255_1	chr11	+	450	4	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	16345	867	16345	-867	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGTGCCACGTGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	115741964	115744255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115741985_115742948_115743100_115743856_115743974_115744093
ENSMUSG00000020782.19_115742976_115744580_1	chr11	+	446	4	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	17356	542	17356	-542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGACGGCCCTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	115742975	115744580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115743100_115743856_115743974_115744093_115744261_115744542
ENSMUSG00000020782.19_115743017_115744648_1	chr11	+	473	4	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	17397	474	17397	-474	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGACTATGGGGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	115743016	115744648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115743100_115743856_115743974_115744093_115744261_115744542
ENSMUSG00000020782.19_115743081_115744687_1	chr11	+	448	4	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	17461	435	17461	-435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGGTGACATCCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	115743080	115744687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115743100_115743856_115743974_115744093_115744261_115744542
ENSMUSG00000020782.19_115743951_115744802_1	chr11	+	450	3	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	18331	320	18331	-320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGTGTGGAGGCACGGC	NA	NA	NA	NA	NA	NA	NA	NA	115743950	115744802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115743974_115744093_115744261_115744542
ENSMUSG00000020790.15_72581072_72631333_1	chr11	+	1411	10	NNC	ENSMUSG00000020790.15	novel	4627	25	NA	NA	99	-28027	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGGTGAATGGGACATC	NA	NA	NA	NA	NA	NA	NA	NA	72581071	72631333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_72581211_72602982_72603176_72605190_72605310_72613453_72613594_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227
ENSMUSG00000020790.15_72602983_72637744_1	chr11	+	1425	10	ISM	ENSMUSG00000020790.15	ENST00000570535.5	4627	25	22010	21616	22010	-21616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGGTGCCCATGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	72602982	72637744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681
ENSMUSG00000020790.15_72603111_72640184_1	chr11	+	1391	11	ISM	ENSMUSG00000020790.15	ENST00000570535.5	4627	25	22138	19176	22138	-19176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCAGCAAGGTGCCAATC	NA	NA	NA	NA	NA	NA	NA	NA	72603110	72640184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125
ENSMUSG00000020790.15_72619617_72641358_1	chr11	+	1442	10	ISM	ENSMUSG00000020790.15	ENST00000570535.5	4627	25	38644	18002	38644	-18002	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAGCTGATATAAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	72619616	72641358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226
ENSMUSG00000020790.15_72623137_72644507_1	chr11	+	1408	10	ISM	ENSMUSG00000020790.15	ENST00000570535.5	4627	25	42164	14853	42164	-14853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGAGTCTACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	72623136	72644507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425
ENSMUSG00000020790.15_72629096_72645259_1	chr11	+	1421	10	ISM	ENSMUSG00000020790.15	ENST00000570535.5	4627	25	48123	14101	48123	-14101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGACTAGAAGAGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	72629095	72645259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162
ENSMUSG00000020790.15_72631323_72648210_1	chr11	+	1423	10	ISM	ENSMUSG00000020790.15	ENST00000570535.5	4627	25	50350	11150	50350	-11150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCCAGAGTCCAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	72631322	72648210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118
ENSMUSG00000020790.15_72645280_72658714_1	chr11	+	1396	9	ISM	ENSMUSG00000020790.15	ENST00000570535.5	4627	25	64307	646	64307	-646	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAATTGGCTAGCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	72645279	72658714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ENSMUSG00000020790.15_72646599_72658834_1	chr11	+	1393	8	ISM	ENSMUSG00000020790.15	ENST00000570535.5	4627	25	65626	526	65626	-526	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCAGAGAGCGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	72646598	72658834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ENSMUSG00000020790.15_72648172_72659011_1	chr11	+	1399	7	ISM	ENSMUSG00000020790.15	ENST00000570535.5	4627	25	67199	349	67199	-349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTTCTAACAGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	72648171	72659011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ENSMUSG00000020790.15_72648246_72659096_1	chr11	+	1410	7	ISM	ENSMUSG00000020790.15	ENST00000570535.5	4627	25	67273	264	67273	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCAGAATGCCTGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	72648245	72659096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ENSMUSG00000020792.16_116179935_116186154_1	chr11	-	1042	10	ISM	ENSMUSG00000020792.16	ENST00000405575.8	2148	19	11345	-8	11128	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGAGCCGGGTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	116186154	116179934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116180112_116180350_116180485_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999
ENSMUSG00000020792.16_116179935_116186515_1	chr11	-	1228	12	ISM	ENSMUSG00000020792.16	ENST00000411744.6	1975	18	10768	-74	10767	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGAGCCGGGTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	116186515	116179934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369
ENSMUSG00000020792.16_116180087_116186516_1	chr11	-	1035	11	ISM	ENSMUSG00000020792.16	ENST00000405575.8	2148	19	10983	144	10766	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCGGAGAAATACATTAA	NA	NA	NA	NA	NA	NA	NA	NA	116186516	116180086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116180112_116180350_116180485_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369
ENSMUSG00000020792.16_116180087_116187626_1	chr11	-	1147	13	ISM	ENSMUSG00000020792.16	ENST00000411744.6	1975	18	9657	78	9656	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	831	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCGGAGAAATACATTAA	NA	NA	NA	NA	NA	NA	NA	NA	116187626	116180086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555
ENSMUSG00000020792.16_116180405_116191163_1	chr11	-	1138	13	ISM	ENSMUSG00000020792.16	ENST00000411744.6	1975	18	6120	396	6119	-396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGACAGGCTCAGAAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	116191163	116180404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116191091
ENSMUSG00000020792.16_116180469_116191203_1	chr11	-	1114	13	ISM	ENSMUSG00000020792.16	ENST00000411744.6	1975	18	6080	460	6079	-460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAAGAGCTGTGCAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	116191203	116180468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116191091
ENSMUSG00000020792.16_116181033_116188492_1	chr11	-	1040	11	ISM	ENSMUSG00000020792.16	ENST00000509881.1	1748	16	8790	-1	8790	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGGCCAGGCTTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	116188492	116181032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116188396
ENSMUSG00000020792.16_116181033_116192025_1	chr11	-	1208	12	ISM	ENSMUSG00000020792.16	ENST00000411744.6	1975	18	5258	1024	5257	1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGGCCAGGCTTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	116192025	116181032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116191091_116191260_116191929
ENSMUSG00000020792.16_116182013_116191134_1	chr11	-	968	11	ISM	ENSMUSG00000020792.16	ENST00000509881.1	1748	16	6148	979	6148	-979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTACCGGGAGCACATCG	NA	NA	NA	NA	NA	NA	NA	NA	116191134	116182012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116188396_116188490_116191091
ENSMUSG00000020792.16_116182278_116191261_1	chr11	-	1049	10	ISM	ENSMUSG00000020792.16	ENST00000509881.1	1748	16	6021	1244	6021	-1244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGACCTTGGCTCCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	116191261	116182277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116188396_116188490_116191091
ENSMUSG00000020792.16_116182357_116195457_1	chr11	-	1153	11	ISM	ENSMUSG00000020792.16	ENST00000411744.6	1975	18	1826	2348	1825	-1323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTACGAGGATCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	116195457	116182356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116191091_116191260_116191929_116192153_116195402
ENSMUSG00000020792.16_116183398_116192025_1	chr11	-	967	10	ISM	ENSMUSG00000020792.16	ENST00000509881.1	1748	16	5257	2364	5257	-2364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACCAGCTACAGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	116192025	116183397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116188396_116188490_116191091_116191260_116191929
ENSMUSG00000020792.16_116184808_116195747_1	chr11	-	1142	10	ISM	ENSMUSG00000020792.16	ENST00000411744.6	1975	18	1536	4799	1535	-3774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCCCAAGGTACACCACA	NA	NA	NA	NA	NA	NA	NA	NA	116195747	116184807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116191091_116191260_116191929_116192153_116195402_116195509_116195689
ENSMUSG00000020792.16_116185232_116192153_1	chr11	-	1016	8	ISM	ENSMUSG00000020792.16	ENST00000509881.1	1748	16	5129	4198	5129	-4198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTTACTCAGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	116192153	116185231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116188396_116188490_116191091_116191260_116191929
ENSMUSG00000020792.16_116185232_116195875_1	chr11	-	1214	9	ISM	ENSMUSG00000020792.16	ENST00000411744.6	1975	18	1408	5223	1407	-4198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTTACTCAGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	116195875	116185231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116191091_116191260_116191929_116192153_116195402_116195509_116195689
ENSMUSG00000020792.16_116185568_116195509_1	chr11	-	1058	8	ISM	ENSMUSG00000020792.16	ENST00000634349.1	2068	19	1774	5559	1773	-4534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCGAAATCCCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	116195509	116185567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116188396_116188490_116191091_116191260_116191929_116192153_116195402
ENSMUSG00000020792.16_116185568_116197283_1	chr11	-	1219	9	ISM	ENSMUSG00000020792.16	ENST00000411744.6	1975	18	0	5559	0	-4534	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCGAAATCCCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	116197283	116185567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213
ENSMUSG00000020792.16_116186029_116195722_1	chr11	-	962	8	ISM	ENSMUSG00000020792.16	ENST00000634349.1	2068	19	1561	6020	1560	-4995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCCGAGTTTGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	116195722	116186028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116186153_116186369_116186516_116187555_116187625_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689
ENSMUSG00000020792.16_116186047_116191165_1	chr11	-	326	3	ISM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	6395	7220	6117	-5013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCACCTCAAGCAGACC	NA	NA	NA	NA	NA	NA	NA	NA	116191165	116186046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116186153_116186369_116186516_116191091
ENSMUSG00000020792.16_116186081_116195771_1	chr11	-	959	8	ISM	ENSMUSG00000020792.16	ENST00000634349.1	2068	19	1512	6072	1511	-5047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCTCCACAGTGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	116195771	116186080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116186153_116186369_116186516_116187555_116187625_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689
ENSMUSG00000020792.16_116186104_116191223_1	chr11	-	327	3	ISM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	6337	7277	6059	-5070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAAAGCCATCATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	116191223	116186103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116186153_116186369_116186516_116191091
ENSMUSG00000020792.16_116186137_116195845_1	chr11	-	977	8	ISM	ENSMUSG00000020792.16	ENST00000634349.1	2068	19	1438	6128	1437	-5103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCTTGAAGGGGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	116195845	116186136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116186153_116186369_116186516_116187555_116187625_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689
ENSMUSG00000020792.16_116186369_116197283_1	chr11	-	1061	8	ISM	ENSMUSG00000020792.16	ENST00000634349.1	2068	19	0	6360	0	-5335	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCCCTCCCTCCCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	116197283	116186368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116186516_116187555_116187625_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213
ENSMUSG00000020794.14_72498145_72575078_1	chr11	+	1550	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	36	2229	36	-2229	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCATTATCTCCTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	72498144	72575078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ENSMUSG00000020794.14_72498145_72575130_1	chr11	+	1602	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	36	2177	36	-2177	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATCTTAGTGAAATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	72498144	72575130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ENSMUSG00000020794.14_72498285_72575196_1	chr11	+	1528	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	176	2111	176	-2111	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATATTAAGGTTGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	72498284	72575196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ENSMUSG00000020794.14_72553894_72575369_1	chr11	+	1527	5	ISM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	55785	1938	55785	-1938	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGATTTTGGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	72553893	72575369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ENSMUSG00000020794.14_72568570_72575586_1	chr11	+	1501	3	ISM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	70461	1721	70461	-1721	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTCTACAGTCTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	72568569	72575586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_72568710_72570194_72570319_72574349
ENSMUSG00000020794.14_72568686_72575703_1	chr11	+	1502	3	ISM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	70577	1604	70577	-1604	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTCCTAAGCAGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	72568685	72575703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_72568710_72570194_72570319_72574349
ENSMUSG00000020801.9_72102550_72105040_1	chr11	-	425	2	NNC	ENSMUSG00000020801.9	novel	1161	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGATTGCTCCACTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	72105040	72102549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_72102894_72104959
ENSMUSG00000020801.9_72102550_72105040_2	chr11	-	431	2	FSM	ENSMUSG00000020801.9	ENST00000575197.1	443	2	3	9	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGATTGCTCCACTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	72105040	72102549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_72102904_72104963
ENSMUSG00000020801.9_72102550_72106141_1	chr11	-	884	4	FSM	ENSMUSG00000020801.9	ENSMUST00000021157.9	1161	4	277	0	277	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGATTGCTCCACTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	72106141	72102549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_72102904_72104602_72104700_72104963_72105042_72105786
ENSMUSG00000020801.9_72102550_72106226_1	chr11	-	969	4	FSM	ENSMUSG00000020801.9	ENSMUST00000021157.9	1161	4	192	0	192	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGATTGCTCCACTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	72106226	72102549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_72102904_72104602_72104700_72104963_72105042_72105786
ENSMUSG00000020801.9_72102663_72106273_1	chr11	-	903	4	FSM	ENSMUSG00000020801.9	ENSMUST00000021157.9	1161	4	145	113	145	-113	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGTACAGTACAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	72106273	72102662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_72102904_72104602_72104700_72104963_72105042_72105786
ENSMUSG00000020803.4_72098373_72100554_1	chr11	+	694	4	FSM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	0	287	0	-287	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTAAATGATGTTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	72098372	72100554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_72098595_72099078_72099161_72099555_72099632_72100240
ENSMUSG00000020803.4_72098441_72100554_1	chr11	+	626	4	FSM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	68	287	68	-287	multi-exon	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTAAATGATGTTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	72098440	72100554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_72098595_72099078_72099161_72099555_72099632_72100240
ENSMUSG00000020803.4_72098441_72100660_1	chr11	+	732	4	FSM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	68	181	68	-181	multi-exon	FALSE	canonical	NA	NA	NA	NA	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTTCAGTATGGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	72098440	72100660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_72098595_72099078_72099161_72099555_72099632_72100240
ENSMUSG00000020803.4_72099556_72100841_1	chr11	+	677	2	ISM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	1183	0	1183	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAACTCAGGCAGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	72099555	72100841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_72099632_72100240
ENSMUSG00000020806.16_116489969_116490945_1	chr11	-	355	2	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	7260	122	7260	-122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCCCTGGTGCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	116490945	116489968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116490265_116490886
ENSMUSG00000020806.16_116490019_116491000_1	chr11	-	360	2	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	7205	172	7205	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAAGCGAGCCCTCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	116491000	116490018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116490265_116490886
ENSMUSG00000020806.16_116490202_116491472_1	chr11	-	355	4	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	6733	355	6733	-355	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGCTGTTGGAGCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	116491472	116490201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116490265_116490886_116491041_116491223_116491325_116491435
ENSMUSG00000020806.16_116490982_116491949_1	chr11	-	369	5	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	6256	1135	6256	-1135	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGCCGGCTGGCACCGC	NA	NA	NA	NA	NA	NA	NA	NA	116491949	116490981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116491041_116491223_116491325_116491435_116491512_116491720_116491816_116491911
ENSMUSG00000020806.16_116491476_116492488_1	chr11	-	371	5	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	5717	1629	5717	-1629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCTATTTCCATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	116492488	116491475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419
ENSMUSG00000020806.16_116491912_116492789_1	chr11	-	408	4	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	5416	2065	5416	-2065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAGGAGATCCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	116492789	116491911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116491976_116492110_116492218_116492419_116492582_116492714
ENSMUSG00000020806.16_116492432_116494530_1	chr11	-	389	4	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	3675	2585	3675	-2585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGCTCGGTGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	116494530	116492431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116492582_116492714_116492790_116493014_116493127_116494478
ENSMUSG00000020806.16_116492502_116494572_1	chr11	-	361	4	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	3633	2655	3633	-2655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCGACATTGAGCGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	116494572	116492501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116492582_116492714_116492790_116493014_116493127_116494478
ENSMUSG00000020806.16_116492547_116494637_1	chr11	-	381	4	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	3568	2700	3568	-2700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATCCGGAAGGACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	116494637	116492546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116492582_116492714_116492790_116493014_116493127_116494478
ENSMUSG00000020806.16_116492773_116494797_1	chr11	-	362	4	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	3408	2926	3408	-2926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTATGAGAGCGTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	116494797	116492772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116492790_116493014_116493127_116494478_116494668_116494753
ENSMUSG00000020806.16_116494614_116495849_1	chr11	-	369	4	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	2356	4767	2356	-4767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAGCACTTTGCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	116495849	116494613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116494668_116494753_116494877_116495203_116495333_116495786
ENSMUSG00000020806.16_116495205_116496104_1	chr11	-	368	3	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	2101	5358	2101	-5358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGCATGGGGTGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	116496104	116495204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116495333_116495786_116495991_116496068
ENSMUSG00000020806.16_116495263_116496150_1	chr11	-	356	3	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	2055	5416	2055	-5416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGAGGAGGATGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	116496150	116495262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116495333_116495786_116495991_116496068
ENSMUSG00000020806.16_116495313_116496206_1	chr11	-	362	3	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	1999	5466	1999	-5466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGCAGCGGTGCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	116496206	116495312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116495333_116495786_116495991_116496068
ENSMUSG00000020806.16_116495847_116496953_1	chr11	-	360	3	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	1252	6000	1252	-6000	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCGCAAGAGGATATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	116496953	116495846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116495991_116496068_116496265_116496933
ENSMUSG00000020806.16_116495902_116497006_1	chr11	-	358	3	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	1199	6055	1199	-6055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTCTCTCACATCCT	NA	NA	NA	NA	NA	NA	NA	NA	116497006	116495901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116495991_116496068_116496265_116496933
ENSMUSG00000020806.16_116495957_116497058_1	chr11	-	355	3	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	1147	6110	1147	-6110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCCAGATGAGGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	116497058	116495956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116495991_116496068_116496265_116496933
ENSMUSG00000020806.16_116496065_116498071_1	chr11	-	343	3	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	134	6218	134	-6218	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCTGGAGGTGATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	116498071	116496064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116496265_116496933_116497059_116498053
ENSMUSG00000020806.16_116496115_116498136_1	chr11	-	358	3	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	69	6268	69	-6268	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTCCAGGGCACTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	116498136	116496114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116496265_116496933_116497059_116498053
ENSMUSG00000020806.16_116496161_116498195_1	chr11	-	371	3	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	10	6314	10	-6314	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCTCGTGCCAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	116498195	116496160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116496265_116496933_116497059_116498053
ENSMUSG00000020808.4_71933281_71937219_1	chr11	+	829	5	ISM	ENSMUSG00000020808.4	ENSMUST00000021164.4	1513	6	0	977	0	-960	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGACCCTGCGTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	71933280	71937219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71933361_71933842_71934164_71935806_71936085_71936504_71936601_71937165
ENSMUSG00000020808.4_71934079_71937751_1	chr11	+	798	4	NNC	ENSMUSG00000020808.4	novel	1433	4	NA	NA	211	-428	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1018	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGGGGACTCCTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	71934078	71937751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_71934260_71935806_71936089_71936504_71936601_71937512
ENSMUSG00000020808.4_71935841_71937864_1	chr11	+	746	4	ISM	ENSMUSG00000020808.4	ENSMUST00000021164.4	1513	6	2560	332	1973	-315	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCAAGGACCTGCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	71935840	71937864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71936085_71936504_71936601_71937165_71937220_71937512
ENSMUSG00000020808.4_71935841_71937974_1	chr11	+	806	3	NNC	ENSMUSG00000020808.4	novel	1337	4	NA	NA	1973	-205	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAGGAGGTATTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	71935840	71937974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_71936089_71936504_71936601_71937512
ENSMUSG00000020808.4_71935949_71937980_1	chr11	+	754	4	ISM	ENSMUSG00000020808.4	ENSMUST00000021164.4	1513	6	2668	216	2081	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGTATTTGCAGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	71935948	71937980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71936085_71936504_71936601_71937165_71937220_71937512
ENSMUSG00000020808.4_71935992_71938040_1	chr11	+	771	4	ISM	ENSMUSG00000020808.4	ENSMUST00000021164.4	1513	6	2711	156	2124	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCACTAGCGTGCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	71935991	71938040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71936085_71936504_71936601_71937165_71937220_71937512
ENSMUSG00000020808.4_71936502_71938196_1	chr11	+	783	2	ISM	ENSMUSG00000020808.4	ENST00000250056.12	1337	4	2634	-17	2634	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGTTTTTAGATATCT	NA	NA	NA	NA	NA	NA	NA	NA	71936501	71938196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71936601_71937512
ENSMUSG00000020808.4_71936502_71938196_2	chr11	+	837	3	ISM	ENSMUSG00000020808.4	ENSMUST00000021164.4	1513	6	3221	0	2634	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGTTTTTAGATATCT	NA	NA	NA	NA	NA	NA	NA	NA	71936501	71938196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71936601_71937165_71937220_71937512
ENSMUSG00000020810.6_116537478_116544750_1	chr11	-	713	3	NNC	ENSMUSG00000020810.6	novel	754	3	NA	NA	34	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGTGAGTCACTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	116544750	116537477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_116537811_116540609_116540842_116544602
ENSMUSG00000020810.6_116537478_116544750_2	chr11	-	721	3	FSM	ENSMUSG00000020810.6	ENST00000589342.1	754	3	34	-1	34	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGTGAGTCACTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	116544750	116537477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116537819_116540609_116540842_116544602
ENSMUSG00000020810.6_116537478_116544750_3	chr11	-	716	3	NNC	ENSMUSG00000020810.6	novel	754	3	NA	NA	34	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1825	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGTGAGTCACTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	116544750	116537477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_116537819_116540609_116540842_116544607
ENSMUSG00000020811.17_71650604_71659639_1	chr11	+	789	3	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	42	20835	42	-20834	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGTACCAACCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	71650603	71659639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71651093_71657614_71657730_71659454
ENSMUSG00000020811.17_71650738_71674149_1	chr11	+	843	5	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	176	6325	176	-6324	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGGATGCTGTGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	71650737	71674149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71651093_71657614_71657730_71659454_71659640_71662678_71662801_71674083
ENSMUSG00000020811.17_71650936_71675141_1	chr11	+	786	6	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	374	5333	374	-5332	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGCTCTGTCGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	71650935	71675141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71651093_71657614_71657730_71659454_71659640_71662678_71662801_71674083_71674244_71675094
ENSMUSG00000020811.17_71650983_71675196_1	chr11	+	794	6	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	421	5278	421	-5277	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGCACGCCACTGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	71650982	71675196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71651093_71657614_71657730_71659454_71659640_71662678_71662801_71674083_71674244_71675094
ENSMUSG00000020811.17_71651034_71678564_1	chr11	+	827	7	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	472	1910	472	-1909	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCGGAGCCGGCGCACC	NA	NA	NA	NA	NA	NA	NA	NA	71651033	71678564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71651093_71657614_71657730_71659454_71659640_71662678_71662801_71674083_71674244_71675094_71675260_71678543
ENSMUSG00000020811.17_71657658_71678622_1	chr11	+	783	6	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	7096	1852	7096	-1851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATGTTTGACTCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	71657657	71678622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71657730_71659454_71659640_71662678_71662801_71674083_71674244_71675094_71675260_71678543
ENSMUSG00000020811.17_71657694_71678688_1	chr11	+	813	6	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	7132	1786	7132	-1785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAATGCGCTGGACACT	NA	NA	NA	NA	NA	NA	NA	NA	71657693	71678688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71657730_71659454_71659640_71662678_71662801_71674083_71674244_71675094_71675260_71678543
ENSMUSG00000020811.17_71659502_71679513_1	chr11	+	805	6	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	8940	961	8940	-960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTATGCCTCCTGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	71659501	71679513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71659640_71662678_71662801_71674083_71674244_71675094_71675260_71678543_71678745_71679494
ENSMUSG00000020811.17_71659502_71679555_1	chr11	+	847	6	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	8940	919	8940	-918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATGGGAAGCGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	71659501	71679555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71659640_71662678_71662801_71674083_71674244_71675094_71675260_71678543_71678745_71679494
ENSMUSG00000020811.17_71659502_71679619_1	chr11	+	911	6	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	8940	855	8940	-854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGGAGATGGTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	71659501	71679619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71659640_71662678_71662801_71674083_71674244_71675094_71675260_71678543_71678745_71679494
ENSMUSG00000020811.17_71662771_71679733_1	chr11	+	795	5	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	12209	741	12209	-740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCTTCACCCCTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	71662770	71679733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71662801_71674083_71674244_71675094_71675260_71678543_71678745_71679494
ENSMUSG00000020811.17_71674179_71679844_1	chr11	+	781	4	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	23617	630	23617	-629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAGGCCCACCCTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	71674178	71679844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71674244_71675094_71675260_71678543_71678745_71679494
ENSMUSG00000020811.17_71675093_71679968_1	chr11	+	842	3	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	24531	506	24531	-505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTTGAAGGGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	71675092	71679968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71675260_71678543_71678745_71679494
ENSMUSG00000020811.17_71675200_71680061_1	chr11	+	784	4	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	24638	413	24638	-412	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTACGCATCCTCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	71675199	71680061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71675260_71678543_71678745_71679494_71679969_71680012
ENSMUSG00000020811.17_71675241_71680130_1	chr11	+	812	4	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	24679	344	24679	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTGAGTGGGGTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	71675240	71680130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71675260_71678543_71678745_71679494_71679969_71680012
ENSMUSG00000020811.17_71678672_71680278_1	chr11	+	813	3	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	28110	196	28110	-195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCAATTGGGCACAAATT	NA	NA	NA	NA	NA	NA	NA	NA	71678671	71680278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_71678745_71679494_71679969_71680012
ENSMUSG00000020812.19_116562514_116566396_1	chr11	+	917	5	FSM	ENSMUSG00000020812.19	ENSMUST00000153405.3	1151	5	11	223	7	-223	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAGTCATCAGACGACC	NA	NA	NA	NA	NA	NA	NA	NA	116562513	116566396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_116562583_116562989_116563565_116564763_116564898_116565125_116565202_116566333
ENSMUSG00000020814.14_116693888_116718872_1	chr11	-	2056	4	NNC	ENSMUSG00000020814.14	novel	2063	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCGTTCTTAAACGTT	NA	NA	NA	NA	NA	NA	NA	NA	116718872	116693887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_116695474_116702748_116702843_116707010_116707069_116718554
ENSMUSG00000020814.14_116693888_116718872_2	chr11	-	2056	4	NIC	ENSMUSG00000020814.14	novel	2063	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCGTTCTTAAACGTT	NA	NA	NA	NA	NA	NA	NA	NA	116718872	116693887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_-_116695481_116702748_116702843_116707010_116707062_116718554
ENSMUSG00000020814.14_116698555_116707061_1	chr11	-	465	4	ISM	ENSMUSG00000020814.14	ENSMUST00000047715.12	757	5	11778	0	750	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTGCTCCCCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	116707061	116698554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116698795_116701613_116701694_116702748_116702843_116707010
ENSMUSG00000020814.14_116698739_116718592_1	chr11	-	326	5	FSM	ENSMUSG00000020814.14	ENSMUST00000047715.12	757	5	247	184	247	-184	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATCCTAAAAGCTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	116718592	116698738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116698795_116701613_116701694_116702748_116702843_116707010_116707069_116718554
ENSMUSG00000020814.14_116698739_116718640_1	chr11	-	374	5	FSM	ENSMUSG00000020814.14	ENSMUST00000047715.12	757	5	199	184	199	-184	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATCCTAAAAGCTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	116718640	116698738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116698795_116701613_116701694_116702748_116702843_116707010_116707069_116718554
ENSMUSG00000020814.14_116698739_116718693_1	chr11	-	427	5	FSM	ENSMUSG00000020814.14	ENSMUST00000047715.12	757	5	146	184	146	-184	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATCCTAAAAGCTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	116718693	116698738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116698795_116701613_116701694_116702748_116702843_116707010_116707069_116718554
ENSMUSG00000020814.14_116701641_116707750_1	chr11	-	275	4	FSM	ENSMUSG00000020814.14	ENST00000589082.1	360	4	61	24	61	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAAATGTTCTTGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	116707750	116701640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116701694_116702748_116702843_116707010_116707062_116707673
ENSMUSG00000020817.17_70808519_70831472_1	chr11	+	1279	10	ISM	ENSMUSG00000020817.17	ENSMUST00000081362.13	2469	17	72718	-163	72718	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAGGGAACACTAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	70808518	70831472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ENSMUSG00000020817.17_70816618_70831892_1	chr11	+	1268	6	ISM	ENSMUSG00000020817.17	ENSMUST00000177731.8	3167	19	80867	-126	80817	126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGCAAAAACAATTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	70816617	70831892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ENSMUSG00000020817.17_70825292_70832124_1	chr11	+	1318	5	ISM	ENSMUSG00000020817.17	ENSMUST00000177731.8	3167	19	89541	-358	89491	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTAGTACACATGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	70825291	70832124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ENSMUSG00000020817.17_70828381_70832275_1	chr11	+	1253	3	ISM	ENSMUSG00000020817.17	ENSMUST00000177731.8	3167	19	92630	-509	92580	151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGAAGCTGGGAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	70828380	70832275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70828449_70830705_70830823_70831207
ENSMUSG00000020818.17_116743436_116764097_1	chr11	+	1401	13	NNC	ENSMUSG00000020818.17	novel	1754	14	NA	NA	74	-674	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGGGTCTGGGAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	116743435	116764097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_116743682_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069
ENSMUSG00000020818.17_116743496_116764153_1	chr11	+	1397	13	NNC	ENSMUSG00000020818.17	novel	1754	14	NA	NA	134	-618	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTACTCGGAAGACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	116743495	116764153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_116743682_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069
ENSMUSG00000020818.17_116743524_116764183_1	chr11	+	1403	13	NNC	ENSMUSG00000020818.17	novel	1754	14	NA	NA	162	-588	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGTCTTTAAGTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	116743523	116764183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_116743687_116744825_116745000_116745468_116745525_116749300_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069
ENSMUSG00000020818.17_116743542_116764663_1	chr11	+	1465	14	FSM	ENSMUSG00000020818.17	ENST00000621483.4	1754	14	180	109	180	-108	multi-exon	TRUE	canonical	NA	NA	NA	NA	2020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGTCATGGTGATATT	NA	NA	NA	NA	NA	NA	NA	NA	116743541	116764663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_116743687_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ENSMUSG00000020818.17_116743584_116764663_1	chr11	+	1420	14	NNC	ENSMUSG00000020818.17	novel	1754	14	NA	NA	222	-108	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGTCATGGTGATATT	NA	NA	NA	NA	NA	NA	NA	NA	116743583	116764663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_116743687_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759490_116762126_116762295_116764069_116764206_116764606
ENSMUSG00000020818.17_116743592_116764663_1	chr11	+	1406	13	NNC	ENSMUSG00000020818.17	novel	1754	14	NA	NA	230	-108	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGTCATGGTGATATT	NA	NA	NA	NA	NA	NA	NA	NA	116743591	116764663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_116743687_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752526_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ENSMUSG00000020818.17_116743604_116764679_1	chr11	+	1419	14	FSM	ENSMUSG00000020818.17	ENST00000621483.4	1754	14	242	93	242	-92	multi-exon	FALSE	canonical	NA	NA	NA	NA	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGGTTTTTTGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	116743603	116764679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_116743687_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ENSMUSG00000020818.17_116743614_116764672_1	chr11	+	1397	14	NNC	ENSMUSG00000020818.17	novel	1754	14	NA	NA	252	-99	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGATATTTGGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	116743613	116764672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_116743682_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ENSMUSG00000020818.17_116743654_116764771_1	chr11	+	1461	14	FSM	ENSMUSG00000020818.17	ENST00000621483.4	1754	14	292	1	292	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAAACAAGTGTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	116743653	116764771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_116743687_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ENSMUSG00000020818.17_116744852_116764779_1	chr11	+	1403	13	NNC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	-52	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGTCTCCAAGAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	116744851	116764779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762126_116762295_116764069_116764206_116764606
ENSMUSG00000020818.17_116744852_116764779_2	chr11	+	1405	13	NNC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	-52	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGTCTCCAAGAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	116744851	116764779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764074_116764206_116764606
ENSMUSG00000020823.17_117006078_117041517_1	chr11	+	1559	12	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	14	6868	14	-6868	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCGATAAAGAGATTATT	NA	NA	NA	NA	NA	NA	NA	NA	117006077	117041517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429
ENSMUSG00000020823.17_117006078_117041558_1	chr11	+	1600	12	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	14	6827	14	-6827	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGTATGTATGGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	117006077	117041558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429
ENSMUSG00000020823.17_117008026_117044042_1	chr11	+	1539	12	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	1962	4343	1962	-4343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTCTGGACGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	117008025	117044042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969
ENSMUSG00000020823.17_117032248_117046094_1	chr11	+	1593	12	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	26184	2291	26184	-2291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTGCAAAGGGGACATC	NA	NA	NA	NA	NA	NA	NA	NA	117032247	117046094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045
ENSMUSG00000020823.17_117032324_117046119_1	chr11	+	1542	12	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	26260	2266	26260	-2266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATTTATCACTCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	117032323	117046119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045
ENSMUSG00000020823.17_117034112_117047301_1	chr11	+	1634	11	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	28048	1084	28048	-1084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTCCTCCCACAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	117034111	117047301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186
ENSMUSG00000020823.17_117034797_117049646_1	chr11	+	1547	12	ISM	ENSMUSG00000020823.17	ENSMUST00000021177.15	2866	17	28799	445	28733	-445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGACCTATCTGAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	117034796	117049646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117049579
ENSMUSG00000020823.17_117037994_117049869_1	chr11	+	1555	10	ISM	ENSMUSG00000020823.17	ENSMUST00000021177.15	2866	17	31996	222	31930	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTCCTCCCAGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	117037993	117049869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117049579
ENSMUSG00000020823.17_117038041_117049929_1	chr11	+	1568	10	ISM	ENSMUSG00000020823.17	ENSMUST00000021177.15	2866	17	32043	162	31977	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTCTAGTGTCTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	117038040	117049929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117049579
ENSMUSG00000020823.17_117039381_117047945_1	chr11	+	1332	8	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	33317	440	33317	-440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATACAGCGTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	117039380	117047945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ENSMUSG00000020823.17_117039391_117050094_1	chr11	+	1620	9	ISM	ENSMUSG00000020823.17	ENSMUST00000021177.15	2866	17	33393	-3	33327	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTCCTTTTCTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	117039390	117050094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117049579
ENSMUSG00000020823.17_117041078_117048176_1	chr11	+	1330	6	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	35014	209	35014	-209	intron_retention	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCGGCTCCCTGTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	117041077	117048176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ENSMUSG00000020823.17_117046080_117048551_1	chr11	+	1322	3	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	40016	-166	40016	166	intron_retention	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCCTCAGTCCTCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	117046079	117048551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117046298_117047186_117047366_117047626
ENSMUSG00000020823.17_117046146_117048622_1	chr11	+	1327	3	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	40082	-237	40082	237	intron_retention	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTCTCAGCCCTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	117046145	117048622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117046298_117047186_117047366_117047626
ENSMUSG00000020823.17_117046203_117048673_1	chr11	+	1321	3	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	40139	-288	40139	288	intron_retention	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTCCTCAGTCTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	117046202	117048673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117046298_117047186_117047366_117047626
ENSMUSG00000020823.17_117047219_117048821_1	chr11	+	1342	2	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	41155	-436	41155	436	intron_retention	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGCAGTGGCCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	117047218	117048821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117047366_117047626
ENSMUSG00000020823.17_117047284_117048885_1	chr11	+	1341	2	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	41220	-500	41220	500	intron_retention	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGAGGGAGTGGGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	117047283	117048885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_117047366_117047626
ENSMUSG00000020829.10_78356697_78357481_1	chr11	+	440	2	ISM	ENSMUSG00000020829.10	ENST00000618626.1	1254	4	45	4779	45	-4779	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCGGATGGCTCTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	78356696	78357481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78356832_78357176
ENSMUSG00000020829.10_78356744_78357537_1	chr11	+	449	2	ISM	ENSMUSG00000020829.10	ENST00000618626.1	1254	4	92	4723	92	-4723	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGGGGGTCACTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	78356743	78357537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78356832_78357176
ENSMUSG00000020829.10_78356798_78357594_1	chr11	+	452	2	ISM	ENSMUSG00000020829.10	ENST00000618626.1	1254	4	146	4666	146	-4666	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTGCTGATTGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	78356797	78357594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78356832_78357176
ENSMUSG00000020829.10_78357638_78359504_1	chr11	+	446	2	ISM	ENSMUSG00000020829.10	ENSMUST00000001126.4	1978	5	1115	3267	986	-2756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAAGCTGGTGAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	78357637	78359504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78358030_78359450
ENSMUSG00000020829.10_78357687_78361685_1	chr11	+	508	2	ISM	ENSMUSG00000020829.10	ENST00000618626.1	1254	4	1035	575	1035	-575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTCTGACCTTGCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	78357686	78361685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78358030_78361520
ENSMUSG00000020829.10_78357805_78362260_1	chr11	+	446	3	ISM	ENSMUSG00000020829.10	ENST00000618626.1	1254	4	1153	0	1153	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAGCCATGAGGAGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	78357804	78362260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78358030_78361520_78361678_78362196
ENSMUSG00000020829.10_78357848_78362227_1	chr11	+	454	4	ISM	ENSMUSG00000020829.10	ENSMUST00000001126.4	1978	5	1325	544	1196	-33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGCAGTTTCCTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	78357847	78362227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78358030_78359450_78359535_78361520_78361678_78362196
ENSMUSG00000020829.10_78357963_78362344_1	chr11	+	456	4	ISM	ENSMUSG00000020829.10	ENSMUST00000001126.4	1978	5	1440	427	1311	84	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCTATCCACCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	78357962	78362344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78358030_78359450_78359535_78361520_78361678_78362196
ENSMUSG00000020829.10_78359456_78362448_1	chr11	+	488	3	ISM	ENSMUSG00000020829.10	ENSMUST00000001126.4	1978	5	2933	323	2804	188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGATACAGAATCTAATCA	NA	NA	NA	NA	NA	NA	NA	NA	78359455	78362448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78359535_78361520_78361678_78362196
ENSMUSG00000020831.19_70126032_70127037_1	chr11	-	556	3	ISM	ENSMUSG00000020831.19	ENSMUST00000108576.10	576	6	1593	-198	1467	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	70127037	70126031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70126295_70126521_70126627_70126849
ENSMUSG00000020831.19_70126032_70128504_1	chr11	-	700	4	ISM	ENSMUSG00000020831.19	ENSMUST00000102569.10	778	5	236	0	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	70128504	70126031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70126291_70126521_70126627_70126849_70127038_70128356
ENSMUSG00000020831.19_70126188_70128730_1	chr11	-	612	5	FSM	ENSMUSG00000020831.19	ENSMUST00000102569.10	778	5	10	156	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACCTGGGACTCTAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	70128730	70126187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70126291_70126521_70126627_70126849_70127038_70128356_70128452_70128609
ENSMUSG00000020831.19_70126230_70128651_1	chr11	-	492	5	FSM	ENSMUSG00000020831.19	ENSMUST00000021181.13	779	5	89	198	-21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCACCTCTGACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	70128651	70126229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70126295_70126849_70127038_70127702_70127805_70128356_70128452_70128609
ENSMUSG00000020832.15_77964683_77965333_1	chr11	-	429	3	ISM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	5876	481	5876	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGCCCTTGGTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	77965333	77964682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_77965001_77965105_77965187_77965303
ENSMUSG00000020832.15_77964815_77966273_1	chr11	-	474	4	ISM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	4936	613	4936	-613	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCCCTGTCAGAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	77966273	77964814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216
ENSMUSG00000020832.15_77964892_77966315_1	chr11	-	439	4	ISM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	4894	690	4894	-690	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCCTCAAATGACCATCC	NA	NA	NA	NA	NA	NA	NA	NA	77966315	77964891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216
ENSMUSG00000020832.15_77964954_77966387_1	chr11	-	449	4	ISM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	4822	752	4822	-752	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTGGGCCGGGACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	77966387	77964953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216
ENSMUSG00000020832.15_77966377_77969156_1	chr11	-	458	6	ISM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	2053	2175	2053	-2175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTTGCGCTCACGCT	NA	NA	NA	NA	NA	NA	NA	NA	77969156	77966376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087
ENSMUSG00000020832.15_77966454_77969210_1	chr11	-	435	6	ISM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	1999	2252	1999	-2252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGAAGTCAGTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	77969210	77966453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087
ENSMUSG00000020832.15_77966582_77970964_1	chr11	-	456	6	ISM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	245	2380	245	-2380	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGGTCCCTAGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	77970964	77966581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
ENSMUSG00000020834.18_77923106_77928373_1	chr11	+	1460	5	FSM	ENSMUSG00000020834.18	ENSMUST00000021187.12	1779	5	0	319	0	-317	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGCCCTTCCCTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	77923105	77928373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_77923325_77923410_77923530_77924838_77924963_77925100_77925413_77927687
ENSMUSG00000020834.18_77923185_77928480_1	chr11	+	1488	5	FSM	ENSMUSG00000020834.18	ENSMUST00000021187.12	1779	5	79	212	7	-210	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTTCTAGCTAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	77923184	77928480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_77923325_77923410_77923530_77924838_77924963_77925100_77925413_77927687
ENSMUSG00000020834.18_77923410_77928692_1	chr11	+	1561	4	FSM	ENSMUSG00000020834.18	ENSMUST00000122342.2	1791	4	232	-2	232	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGGCTCCCGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	77923409	77928692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_77923530_77924838_77924963_77925100_77925413_77927687
ENSMUSG00000020840.11_76836555_76842011_1	chr11	+	615	4	ISM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	225	36194	225	-36194	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGCCTTTCTCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	76836554	76842011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869
ENSMUSG00000020840.11_76836677_76843415_1	chr11	+	582	5	ISM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	347	34790	347	-34790	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAGAATAGGAGGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	76836676	76843415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326
ENSMUSG00000020840.11_76837158_76856741_1	chr11	+	643	6	ISM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	828	21464	828	-21464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTGCAGTTTTACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	76837157	76856741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640
ENSMUSG00000020840.11_76837211_76856741_1	chr11	+	590	6	ISM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	881	21464	881	-21464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTGCAGTTTTACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	76837210	76856741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640
ENSMUSG00000020840.11_76841964_76857866_1	chr11	+	592	6	ISM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	5634	20339	5634	-20339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCTCAGTGACATGAATG	NA	NA	NA	NA	NA	NA	NA	NA	76841963	76857866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819
ENSMUSG00000020840.11_76845334_76862804_1	chr11	+	666	6	ISM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	9004	15401	9004	-15401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGCCAACTACCAACT	NA	NA	NA	NA	NA	NA	NA	NA	76845333	76862804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734
ENSMUSG00000020840.11_76856639_76877319_1	chr11	+	591	6	ISM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	20309	886	20309	-886	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTGGTTCTCGGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	76856638	76877319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ENSMUSG00000020840.11_76856693_76877379_1	chr11	+	597	6	ISM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	20363	826	20363	-826	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCTGGCTGTGTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	76856692	76877379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ENSMUSG00000020840.11_76856752_76877425_1	chr11	+	584	6	ISM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	20422	780	20422	-780	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCCATGGGGGCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	76856751	76877425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ENSMUSG00000020840.11_76857631_76877549_1	chr11	+	590	5	ISM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	21301	656	21301	-656	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCCACAGGATACAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	76857630	76877549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ENSMUSG00000020840.11_76857680_76877655_1	chr11	+	647	5	ISM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	21350	550	21350	-550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGAAGGATCGGGGCATC	NA	NA	NA	NA	NA	NA	NA	NA	76857679	76877655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ENSMUSG00000020840.11_76862752_76877832_1	chr11	+	584	2	ISM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	26422	373	26422	-373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTAGGGGAGGGTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	76862751	76877832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_76862805_76877301
ENSMUSG00000020843.16_76298031_76306175_1	chr11	+	1812	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	62	943	62	-943	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTTGGCTTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	76298030	76306175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
ENSMUSG00000020843.16_76298031_76306242_1	chr11	+	1879	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	62	876	62	-876	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGAGAACGAGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	76298030	76306242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
ENSMUSG00000020843.16_76298172_76306303_1	chr11	+	1799	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	203	815	203	-815	multi-exon	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAAGGTGGAACTAATGG	NA	NA	NA	NA	NA	NA	NA	NA	76298171	76306303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
ENSMUSG00000020843.16_76300466_76306442_1	chr11	+	1843	3	ISM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	2497	676	2497	-676	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTCATCTTCACTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	76300465	76306442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_76300665_76301952_76302026_76304871
ENSMUSG00000020843.16_76301968_76306606_1	chr11	+	1793	2	ISM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	3999	512	3999	-512	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCGTTCCTATGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	76301967	76306606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_76302026_76304871
ENSMUSG00000020844.7_76148661_76152411_1	chr11	-	957	2	ISM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	137555	637	137555	-637	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCATCTTCCCAAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	76152411	76148660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_76149574_76152367
ENSMUSG00000020844.7_76148987_76163249_1	chr11	-	940	4	ISM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	126717	963	126717	-963	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAGAGGAAGGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	76163249	76148986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201
ENSMUSG00000020844.7_76149278_76169351_1	chr11	-	995	7	ISM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	120615	1254	120615	-1254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGCCTTGTTTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	76169351	76149277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299
ENSMUSG00000020844.7_76149458_76289597_1	chr11	-	952	8	FSM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	369	1434	369	-1434	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCCATTGTGGAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	76289597	76149457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76289526
ENSMUSG00000020844.7_76149535_76289665_1	chr11	-	943	8	FSM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	301	1511	301	-1511	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGGCGGCGCCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	76289665	76149534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76289526
ENSMUSG00000020844.7_76153834_76289894_1	chr11	-	1008	6	ISM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	72	5810	72	-5810	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGAGCTGGAGGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	76289894	76153833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76289526
ENSMUSG00000020849.14_75623787_75647698_1	chr11	+	494	4	ISM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	92	8973	4	-7919	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGCAGAGAACAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	75623786	75647698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642
ENSMUSG00000020849.14_75623787_75655617_1	chr11	+	979	6	FSM	ENSMUSG00000020849.14	ENST00000571732.5	1808	6	43	786	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGTTCCTGCCCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	75623786	75655617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_75623918_75642681_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ENSMUSG00000020849.14_75623787_75655769_1	chr11	+	1131	6	FSM	ENSMUSG00000020849.14	ENST00000571732.5	1808	6	43	634	4	152	multi-exon	FALSE	canonical	NA	NA	NA	NA	5326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGACACTAACAGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	75623786	75655769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_75623918_75642681_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ENSMUSG00000020849.14_75623787_75656109_1	chr11	+	795	2	FSM	ENSMUSG00000020849.14	ENST00000573026.1	799	2	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGGCTGCTCATTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	75623786	75656109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_75623918_75655445
ENSMUSG00000020849.14_75623787_75656109_2	chr11	+	793	2	NNC	ENSMUSG00000020849.14	novel	799	2	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGGCTGCTCATTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	75623786	75656109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_75623922_75655451
ENSMUSG00000020849.14_75642845_75650183_1	chr11	+	442	4	ISM	ENSMUSG00000020849.14	ENST00000571732.5	1808	6	19101	6220	19062	-5434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTCTACGCTCATCATGC	NA	NA	NA	NA	NA	NA	NA	NA	75642844	75650183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75642907_75646399_75646507_75647642_75647850_75650117
ENSMUSG00000020849.14_75646399_75656109_1	chr11	+	1116	4	ISM	ENSMUSG00000020849.14	ENST00000571732.5	1808	6	22655	294	22616	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGGCTGCTCATTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	75646398	75656109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75646507_75647642_75647850_75650117_75650255_75655445
ENSMUSG00000020849.14_75647643_75655546_1	chr11	+	445	3	ISM	ENSMUSG00000020849.14	ENST00000571732.5	1808	6	23899	857	23860	-71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCCCCTTGGAAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	75647642	75655546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75647850_75650117_75650255_75655445
ENSMUSG00000020849.14_75650115_75655769_1	chr11	+	464	2	ISM	ENSMUSG00000020849.14	ENST00000571732.5	1808	6	26371	634	26332	152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGACACTAACAGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	75650114	75655769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75650255_75655445
ENSMUSG00000020849.14_75650115_75656404_1	chr11	+	1099	2	ISM	ENSMUSG00000020849.14	ENST00000571732.5	1808	6	26371	-1	26332	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCATGCCTCCATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	75650114	75656404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75650255_75655445
ENSMUSG00000020857.12_93840643_93847085_1	chr11	-	1000	5	NNC	ENSMUSG00000020857.12	novel	1012	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGCAGTGTTCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	93847085	93840642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_93840873_93842725_93842839_93843634_93843728_93846320_93846451_93846651
ENSMUSG00000020857.12_93840643_93847085_2	chr11	-	1004	5	NNC	ENSMUSG00000020857.12	novel	1012	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGCAGTGTTCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	93847085	93840642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_93840873_93842725_93842830_93843621_93843728_93846320_93846451_93846651
ENSMUSG00000020863.16_94181887_94212614_2	chr11	-	1850	11	FSM	ENSMUSG00000020863.16	ENSMUST00000107821.9	2050	11	200	0	170	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATATGAGGCATACTAG	NA	NA	NA	NA	NA	NA	NA	NA	94212614	94181886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_94182405_94183910_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ENSMUSG00000020863.16_94182155_94187893_1	chr11	-	2190	4	ISM	ENSMUSG00000020863.16	ENSMUST00000021226.14	3373	11	24921	190	24891	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAGAAATATTACCTA	NA	NA	NA	NA	NA	NA	NA	NA	94187893	94182154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94183859_94183963_94184105_94186745_94186907_94187709
ENSMUSG00000020863.16_94182370_94188710_1	chr11	-	2201	5	ISM	ENSMUSG00000020863.16	ENSMUST00000021226.14	3373	11	24104	405	24074	-405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGGAATAAAGTGAAGATCA	NA	NA	NA	NA	NA	NA	NA	NA	94188710	94182369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584
ENSMUSG00000020863.16_94182997_94212721_1	chr11	-	2248	11	FSM	ENSMUSG00000020863.16	ENSMUST00000021226.14	3373	11	93	1032	63	-1032	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAAACACTTCATATTAC	NA	NA	NA	NA	NA	NA	NA	NA	94212721	94182996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ENSMUSG00000020865.17_94255681_94266548_1	chr11	-	1753	11	NNC	ENSMUSG00000020865.17	novel	1797	12	NA	NA	17198	4	intron_retention	TRUE	non_canonical	NA	NA	NA	NA	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTTGTGTCCCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	94266548	94255680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_94256056_94258415_94258509_94259006_94259169_94259266_94259445_94262444_94262627_94263698_94263831_94264452_94264515_94264734_94264861_94265547_94265686_94265895_94266019_94266366
ENSMUSG00000020865.17_94255681_94266548_3	chr11	-	1754	11	NNC	ENSMUSG00000020865.17	novel	1797	12	NA	NA	17198	4	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTTGTGTCCCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	94266548	94255680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_94256056_94258415_94258509_94259006_94259169_94259266_94259445_94262444_94262627_94263698_94263831_94264452_94264515_94264734_94264861_94265547_94265686_94265892_94266019_94266368
ENSMUSG00000020865.17_94255681_94266548_4	chr11	-	1754	11	NNC	ENSMUSG00000020865.17	novel	1797	12	NA	NA	17198	4	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTTGTGTCCCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	94266548	94255680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_94256056_94258415_94258509_94259006_94259169_94259266_94259445_94262444_94262627_94263698_94263831_94264452_94264515_94264736_94264861_94265547_94265686_94265892_94266019_94266366
ENSMUSG00000020865.17_94255681_94266548_5	chr11	-	1747	11	NNC	ENSMUSG00000020865.17	novel	1797	12	NA	NA	17198	4	intron_retention	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTTGTGTCCCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	94266548	94255680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_94256056_94258415_94258509_94259006_94259169_94259266_94259445_94262444_94262627_94263698_94263831_94264461_94264515_94264734_94264861_94265547_94265686_94265892_94266019_94266366
ENSMUSG00000020865.17_94255681_94266548_7	chr11	-	1746	11	NNC	ENSMUSG00000020865.17	novel	1797	12	NA	NA	17198	4	intron_retention	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTTGTGTCCCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	94266548	94255680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_94256056_94258415_94258509_94259006_94259169_94259266_94259445_94262444_94262617_94263698_94263831_94264452_94264515_94264734_94264861_94265547_94265686_94265892_94266019_94266366
ENSMUSG00000020865.17_94255681_94266548_8	chr11	-	1753	11	NNC	ENSMUSG00000020865.17	novel	1797	12	NA	NA	17198	4	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTTGTGTCCCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	94266548	94255680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_94256056_94258415_94258509_94259006_94259169_94259266_94259445_94262444_94262627_94263698_94263831_94264452_94264515_94264734_94264861_94265550_94265686_94265892_94266019_94266366
ENSMUSG00000020865.17_94255681_94266548_9	chr11	-	1750	11	NNC	ENSMUSG00000020865.17	novel	1797	12	NA	NA	17198	4	intron_retention	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTTGTGTCCCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	94266548	94255680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_94256050_94258415_94258509_94259006_94259169_94259266_94259445_94262444_94262627_94263698_94263831_94264452_94264515_94264734_94264861_94265547_94265686_94265892_94266019_94266366
ENSMUSG00000020865.17_94255681_94283746_1	chr11	-	1801	12	FSM	ENSMUSG00000020865.17	ENST00000427699.5	1797	12	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTTGTGTCCCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	94283746	94255680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_94256056_94258415_94258509_94259006_94259169_94259266_94259445_94262444_94262627_94263698_94263831_94264452_94264515_94264734_94264861_94265547_94265686_94265892_94266019_94266366_94266544_94283696
ENSMUSG00000020869.9_94520640_94529413_1	chr11	+	677	5	ISM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	47	6629	47	-6629	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGTGGAGCGAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	94520639	94529413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356
ENSMUSG00000020869.9_94520754_94532089_1	chr11	+	623	6	ISM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	161	3953	161	-3953	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGCGCGAGCTGCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	94520753	94532089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045
ENSMUSG00000020869.9_94520867_94532189_1	chr11	+	610	6	ISM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	274	3853	274	-3853	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCCTAAGAAAGAGGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	94520866	94532189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045
ENSMUSG00000020869.9_94522929_94534161_1	chr11	+	591	6	ISM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	2336	1881	2336	-1881	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACACTCGCTCCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	94522928	94534161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
ENSMUSG00000020869.9_94525458_94534309_1	chr11	+	614	5	ISM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	4865	1733	4865	-1733	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCTGCGTCATCATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	94525457	94534309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
ENSMUSG00000020869.9_94525748_94534411_1	chr11	+	634	4	ISM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	5155	1631	5155	-1631	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGGAATTGGGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	94525747	94534411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94525843_94529356_94529430_94532045_94532220_94534119
ENSMUSG00000020869.9_94525816_94534449_1	chr11	+	604	4	ISM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	5223	1593	5223	-1593	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCGTCAGACCTACCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	94525815	94534449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94525843_94529356_94529430_94532045_94532220_94534119
ENSMUSG00000020869.9_94529412_94534566_1	chr11	+	639	3	ISM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	8819	1476	8819	-1476	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGAGGAAGAGTTACCTG	NA	NA	NA	NA	NA	NA	NA	NA	94529411	94534566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94529430_94532045_94532220_94534119
ENSMUSG00000020869.9_94532091_94534613_1	chr11	+	623	2	ISM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	11498	1429	11498	-1429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAGAGAGAAGGCATAGG	NA	NA	NA	NA	NA	NA	NA	NA	94532090	94534613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94532220_94534119
ENSMUSG00000020869.9_94532156_94534653_1	chr11	+	598	2	ISM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	11563	1389	11563	-1389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAAGGCAAGGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	94532155	94534653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94532220_94534119
ENSMUSG00000020873.16_95275583_95281365_1	chr11	+	1030	8	ISM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	65	1237	65	-1237	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCGTGTACTTCGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	95275582	95281365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_95275940_95276626_95276731_95277311_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350
ENSMUSG00000020873.16_95275717_95281479_1	chr11	+	1004	8	NNC	ENSMUSG00000020873.16	novel	1523	9	NA	NA	199	-1123	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCACCGTGCTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95275716	95281479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_95275940_95276626_95276731_95277311_95277443_95278036_95278068_95278595_95278754_95279905_95280027_95281103_95281211_95281350
ENSMUSG00000020873.16_95275732_95282330_1	chr11	+	1019	8	NNC	ENSMUSG00000020873.16	novel	1523	9	NA	NA	214	-272	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTTTGGGAAAGGAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	95275731	95282330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_95275940_95276626_95276731_95277311_95277456_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ENSMUSG00000020873.16_95275732_95282335_1	chr11	+	1042	9	FSM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	214	267	214	-267	multi-exon	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGGAAAGGAACAAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	95275731	95282335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_95275940_95276626_95276731_95277311_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ENSMUSG00000020873.16_95275856_95282392_1	chr11	+	957	8	NNC	ENSMUSG00000020873.16	novel	1523	9	NA	NA	338	-210	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACTTAAATTATTATCT	NA	NA	NA	NA	NA	NA	NA	NA	95275855	95282392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_95275940_95276626_95276731_95277311_95277456_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ENSMUSG00000020873.16_95275856_95282395_1	chr11	+	978	9	FSM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	338	207	338	-207	multi-exon	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTAAATTATTATCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	95275855	95282395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_95275940_95276626_95276731_95277311_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ENSMUSG00000020873.16_95275920_95282435_1	chr11	+	954	9	FSM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	402	167	402	-167	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTCGGGTCATGATAAG	NA	NA	NA	NA	NA	NA	NA	NA	95275919	95282435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_95275940_95276626_95276731_95277311_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ENSMUSG00000020873.16_95277312_95282602_1	chr11	+	997	7	ISM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	1794	0	1794	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGAGACCCTGCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	95277311	95282602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ENSMUSG00000020873.16_95277312_95282602_3	chr11	+	979	6	NNC	ENSMUSG00000020873.16	novel	1523	9	NA	NA	1794	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGAGACCCTGCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	95277311	95282602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_95277456_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ENSMUSG00000020873.16_95277312_95282602_4	chr11	+	991	7	NNC	ENSMUSG00000020873.16	novel	1523	9	NA	NA	1794	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGAGACCCTGCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	95277311	95282602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_95277443_95278036_95278068_95278595_95278754_95279905_95280027_95281103_95281211_95281350_95281505_95282313
ENSMUSG00000020876.15_96658381_96663636_1	chr11	-	2106	4	ISM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	4721	0	4721	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCAAAGCCCTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	96663636	96658380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607
ENSMUSG00000020876.15_96658508_96663680_1	chr11	-	2023	4	ISM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	4677	127	4677	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGGCTCTTCTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	96663680	96658507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607
ENSMUSG00000020876.15_96658703_96667810_1	chr11	-	2075	8	ISM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	547	322	547	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTGTTGCAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	96667810	96658702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793
ENSMUSG00000020876.15_96658703_96667875_1	chr11	-	2140	8	ISM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	482	322	482	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTGTTGCAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	96667875	96658702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793
ENSMUSG00000020876.15_96658898_96668346_1	chr11	-	2023	9	FSM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	11	517	11	-195	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCAGGCTGGGTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	96668346	96658897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793_96667888_96668280
ENSMUSG00000020876.15_96659358_96668427_1	chr11	-	1348	5	FSM	ENSMUSG00000020876.15	ENST00000452859.6	1382	5	34	0	34	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAAATGGCCACGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	96668427	96659357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96668280
ENSMUSG00000020877.12_96920827_96921755_1	chr11	+	279	3	ISM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	63	3029	63	-3029	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGCCCCTCTTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	96920826	96921755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96920882_96921241_96921416_96921705
ENSMUSG00000020877.12_96921848_96923647_1	chr11	+	307	3	ISM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	1084	1137	1084	-1137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCAGCCATGCCAAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	96921847	96923647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96921888_96922914_96923115_96923580
ENSMUSG00000020877.12_96922986_96923745_1	chr11	+	294	2	ISM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	2222	1039	2222	-1039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCAAGGCCCGCTTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	96922985	96923745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96923115_96923580
ENSMUSG00000020877.12_96923586_96923943_1	chr11	+	265	2	ISM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	2822	841	2822	-841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATGGACTCCGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	96923585	96923943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96923797_96923889
ENSMUSG00000020877.12_96923997_96924547_1	chr11	+	296	3	ISM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	3233	237	3233	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTCAGAGGGCTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	96923996	96924547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96924056_96924144_96924326_96924491
ENSMUSG00000020877.12_96924203_96924656_1	chr11	+	288	2	ISM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	3439	128	3439	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGCTCTGGGGCCGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	96924202	96924656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96924326_96924491
ENSMUSG00000020882.18_97892334_97913313_1	chr11	-	3229	13	FSM	ENSMUSG00000020882.18	ENST00000622445.4	3332	13	77	26	77	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTTTTCTTTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	97913313	97892333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ENSMUSG00000020882.18_97892334_97913319_1	chr11	-	3231	13	NNC	ENSMUSG00000020882.18	novel	3396	14	NA	NA	71	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTTTTCTTTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	97913319	97892333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902691_97902765_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ENSMUSG00000020882.18_97892334_97913321_1	chr11	-	3237	13	FSM	ENSMUSG00000020882.18	ENST00000622445.4	3332	13	69	26	69	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTTTTCTTTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	97913321	97892333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ENSMUSG00000020882.18_97892334_97913453_1	chr11	-	3364	13	NNC	ENSMUSG00000020882.18	novel	3396	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTTTTCTTTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	97913453	97892333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_97894189_97895954_97896141_97896513_97896601_97900102_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ENSMUSG00000020882.18_97900451_97903108_1	chr11	-	524	6	ISM	ENSMUSG00000020882.18	ENSMUST00000107561.9	1778	12	6090	4878	6090	-4700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAACCCCAGCAAACACA	NA	NA	NA	NA	NA	NA	NA	NA	97903108	97900450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97900505_97900683_97900743_97901121_97901203_97902168_97902324_97902691_97902769_97903010
ENSMUSG00000020883.19_97979523_97990935_1	chr11	-	1711	8	ISM	ENSMUSG00000020883.19	ENST00000394294.7	2333	14	49472	0	49472	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCAGGGGACCCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	97990935	97979522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808
ENSMUSG00000020883.19_97979816_98019158_1	chr11	-	1730	13	ISM	ENSMUSG00000020883.19	ENST00000394294.7	2333	14	21249	293	21249	-293	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGGGGTCCAAATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	98019158	97979815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140
ENSMUSG00000020883.19_97979925_98019194_1	chr11	-	1657	13	ISM	ENSMUSG00000020883.19	ENST00000394294.7	2333	14	21213	402	21213	-402	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTTGTTCCCGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	98019194	97979924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140
ENSMUSG00000020883.19_97980032_98040225_1	chr11	-	1642	14	FSM	ENSMUSG00000020883.19	ENST00000394294.7	2333	14	182	509	182	385	multi-exon	FALSE	canonical	NA	NA	NA	NA	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGGTGAGAGGTAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	98040225	97980031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ENSMUSG00000020883.19_97980081_98040280_1	chr11	-	1648	14	FSM	ENSMUSG00000020883.19	ENST00000394294.7	2333	14	127	558	127	336	multi-exon	FALSE	canonical	NA	NA	NA	NA	1363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTAAGGGGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	98040280	97980080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ENSMUSG00000020883.19_97980138_98040432_1	chr11	-	1743	14	FSM	ENSMUSG00000020883.19	ENST00000394294.7	2333	14	-25	615	6	279	multi-exon	FALSE	canonical	NA	NA	NA	NA	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGAGGGAGGGGACATTC	NA	NA	NA	NA	NA	NA	NA	NA	98040432	97980137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ENSMUSG00000020883.19_97992565_98001855_1	chr11	-	222	3	ISM	ENSMUSG00000020883.19	ENST00000577399.5	1502	15	39319	12148	38552	-12148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTACGTCAATAACAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	98001855	97992564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97992623_98000319_98000389_98001760
ENSMUSG00000020884.16_69945181_69948462_1	chr11	+	1035	9	FSM	ENSMUSG00000020884.16	ENST00000269299.8	1007	9	-28	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAGGAACCTTCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	69945180	69948462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69945319_69945676_69945793_69946822_69946940_69947062_69947159_69947239_69947312_69947683_69947771_69947857_69948010_69948089_69948197_69948312
ENSMUSG00000020884.16_69945181_69948462_2	chr11	+	918	8	FSM	ENSMUSG00000020884.16	ENST00000619926.4	988	8	70	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAGGAACCTTCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	69945180	69948462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69945319_69945676_69945793_69947062_69947159_69947239_69947312_69947683_69947771_69947857_69948010_69948089_69948197_69948312
ENSMUSG00000020884.16_69945181_69948462_3	chr11	+	1031	9	NNC	ENSMUSG00000020884.16	novel	1007	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAGGAACCTTCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	69945180	69948462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_69945319_69945676_69945793_69946822_69946940_69947062_69947159_69947243_69947312_69947683_69947771_69947857_69948010_69948089_69948197_69948312
ENSMUSG00000020888.17_69891661_69903127_1	chr11	+	4819	16	FSM	ENSMUSG00000020888.17	ENSMUST00000190940.2	5037	16	218	0	218	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCATGTTACCCCACTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	69891660	69903127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969_69901604_69901702
ENSMUSG00000020889.12_98659038_98660614_1	chr11	-	505	3	ISM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	5545	280	5545	-280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGCCTTCTGCCGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	98660614	98659037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98659246_98659874_98660086_98660528
ENSMUSG00000020889.12_98661280_98662142_1	chr11	-	495	2	ISM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	4017	2522	4017	-2522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACCGCTGGGAGAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	98662142	98661279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98661658_98662025
ENSMUSG00000020889.12_98662884_98665969_1	chr11	-	503	2	ISM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	190	4126	190	-4126	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGGCAGCTTCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	98665969	98662883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98662961_98665543
ENSMUSG00000020894.17_68979369_68981990_1	chr11	+	932	5	FSM	ENSMUSG00000020894.17	ENSMUST00000021273.13	2205	5	53	1220	-31	463	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACTTGGTCCTAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	68979368	68981990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801_68980854_68981475
ENSMUSG00000020894.17_68979645_68981527_1	chr11	+	598	5	FSM	ENSMUSG00000020894.17	ENST00000488857.5	843	5	245	0	245	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCCACCCCCAGCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	68979644	68981527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_68979859_68979931_68980053_68980556_68980716_68980801_68980854_68981475
ENSMUSG00000020894.17_68979771_68981527_1	chr11	+	472	5	FSM	ENSMUSG00000020894.17	ENST00000488857.5	843	5	371	0	371	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCCACCCCCAGCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	68979770	68981527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_68979859_68979931_68980053_68980556_68980716_68980801_68980854_68981475
ENSMUSG00000020894.17_68979992_68982116_1	chr11	+	913	4	ISM	ENSMUSG00000020894.17	ENST00000488857.5	843	5	592	-589	592	589	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTCTTCACTCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	68979991	68982116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68980053_68980556_68980716_68980801_68980854_68981475
ENSMUSG00000020894.17_68980621_68982295_1	chr11	+	967	3	ISM	ENSMUSG00000020894.17	ENST00000488857.5	843	5	1221	-768	1221	768	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTCCCTTACCCCG	NA	NA	NA	NA	NA	NA	NA	NA	68980620	68982295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68980716_68980801_68980854_68981475
ENSMUSG00000020895.15_68961762_68963642_1	chr11	+	435	5	FSM	ENSMUSG00000020895.15	ENSMUST00000075980.12	779	5	130	214	125	-214	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAATCCGGGTGTAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	68961761	68963642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963346_68963571
ENSMUSG00000020897.13_68936473_68939044_1	chr11	+	580	4	ISM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	-5	3446	0	-3446	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGGCAAATTTGGAAACG	NA	NA	NA	NA	NA	NA	NA	NA	68936472	68939044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999
ENSMUSG00000020897.13_68936665_68939381_1	chr11	+	585	5	ISM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	187	3109	187	-3109	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACTTAATCCTGGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	68936664	68939381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331
ENSMUSG00000020897.13_68936820_68939593_1	chr11	+	556	6	ISM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	342	2897	342	-2897	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGAAGAAGGTAATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	68936819	68939593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556
ENSMUSG00000020897.13_68938610_68939705_1	chr11	+	654	5	ISM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	2132	2785	2132	-2785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGAGGGACTTGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	68938609	68939705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556
ENSMUSG00000020897.13_68938803_68941183_1	chr11	+	601	5	ISM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	2325	1307	2325	-1307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATGCATAATGAAATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	68938802	68941183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127
ENSMUSG00000020897.13_68939070_68941754_1	chr11	+	614	5	ISM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	2592	736	2592	-736	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGGCGCCCAGGACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	68939069	68941754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ENSMUSG00000020897.13_68939137_68941793_1	chr11	+	586	5	ISM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	2659	697	2659	-697	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCCTGGCAACGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	68939136	68941793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ENSMUSG00000020897.13_68939176_68941861_1	chr11	+	615	5	ISM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	2698	629	2698	-629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTCTGCCTCCCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	68939175	68941861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ENSMUSG00000020897.13_68941185_68942132_1	chr11	+	525	2	ISM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	4707	358	4707	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCACTGGCTGCTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	68941184	68942132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68941303_68941725
ENSMUSG00000020898.19_68911939_68921744_1	chr11	+	2166	12	ISM	ENSMUSG00000020898.19	ENSMUST00000116359.3	3978	23	5016	5552	5016	-5552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACTTGGCTTTGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	68911938	68921744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516
ENSMUSG00000020899.17_68878943_68879440_1	chr11	-	405	2	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	19846	2420	19846	-2420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCGACACCTGGCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	68879440	68878942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68879100_68879192
ENSMUSG00000020899.17_68881003_68881619_1	chr11	-	414	3	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	17667	4480	17667	-4480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGGTAAGCCTGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	68881619	68881002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68881088_68881193_68881402_68881498
ENSMUSG00000020899.17_68881866_68882718_1	chr11	-	397	4	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	16568	5343	16568	-5343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTGCTTGGGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	68882718	68881865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68881986_68882163_68882320_68882510_68882595_68882681
ENSMUSG00000020899.17_68881919_68882772_1	chr11	-	398	4	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	16514	5396	16514	-5396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGGGAACTGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	68882772	68881918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68881986_68882163_68882320_68882510_68882595_68882681
ENSMUSG00000020899.17_68882183_68883043_1	chr11	-	440	4	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	16243	5660	16243	-5660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGGGGCTGCTGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	68883043	68882182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68882320_68882510_68882595_68882681_68882863_68883005
ENSMUSG00000020899.17_68882254_68883073_1	chr11	-	399	4	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	16213	5731	16213	-5731	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTCCCAGCTTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	68883073	68882253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68882320_68882510_68882595_68882681_68882863_68883005
ENSMUSG00000020899.17_68883157_68884194_1	chr11	-	407	4	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	15092	6634	15092	-6634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCACTGAGCCACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	68884194	68883156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68883237_68883480_68883613_68883741_68883865_68884122
ENSMUSG00000020899.17_68883538_68884444_1	chr11	-	413	4	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	14842	7015	14842	-7015	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAACCGGGTCCTAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	68884444	68883537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68883613_68883741_68883865_68884122_68884285_68884391
ENSMUSG00000020899.17_68883808_68884737_1	chr11	-	385	4	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	14549	7285	14549	-7285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGACACCTCCAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	68884737	68883807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68883865_68884122_68884285_68884391_68884454_68884633
ENSMUSG00000020899.17_68884241_68888555_1	chr11	-	403	5	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	10731	7718	10731	-7718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACCAGGAGTCAAATGCAC	NA	NA	NA	NA	NA	NA	NA	NA	68888555	68884240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489
ENSMUSG00000020899.17_68885102_68890934_1	chr11	-	417	4	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	8352	8579	8352	-8579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCGTCTGTGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	68890934	68885101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68885158_68888489_68888619_68888738_68888871_68890834
ENSMUSG00000020899.17_68888545_68891138_1	chr11	-	403	4	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	8148	12022	8148	-12022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGCATTGGGTCCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	68891138	68888544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68888619_68888738_68888871_68890834_68890964_68891070
ENSMUSG00000020899.17_68890879_68891767_1	chr11	-	419	4	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	7519	14356	7519	-14356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGCACTGCTGGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	68891767	68890878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68890964_68891070_68891196_68891274_68891416_68891699
ENSMUSG00000020899.17_68891075_68891980_1	chr11	-	416	4	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	7306	14552	7306	-14552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTGAGTTAGGGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	68891980	68891074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68891196_68891274_68891416_68891699_68891806_68891932
ENSMUSG00000020899.17_68891130_68892028_1	chr11	-	409	4	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	7258	14607	7258	-14607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACAGCAGGGGCTTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	68892028	68891129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68891196_68891274_68891416_68891699_68891806_68891932
ENSMUSG00000020899.17_68891375_68892625_1	chr11	-	404	4	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	6661	14852	6661	-14852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGGGAAGAAGCTAGCG	NA	NA	NA	NA	NA	NA	NA	NA	68892625	68891374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68891416_68891699_68891806_68891932_68892123_68892558
ENSMUSG00000020899.17_68892036_68894603_1	chr11	-	411	4	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	4683	15513	4683	-15513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGAGCTTCTCTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	68894603	68892035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68892123_68892558_68892665_68893305_68893442_68894521
ENSMUSG00000020901.14_68322986_68381388_1	chr11	+	689	7	ISM	ENSMUSG00000020901.14	ENSMUST00000021283.8	4370	19	39	7287	19	-5688	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACACCACCCTGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	68322985	68381388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68323089_68364620_68364737_68366228_68366330_68367130_68367200_68368269_68368409_68377376_68377447_68381297
ENSMUSG00000020901.14_68322986_68381409_1	chr11	+	594	6	ISM	ENSMUSG00000020901.14	ENST00000616147.4	2541	19	19	10856	19	-5667	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTTCCAGGCCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	68322985	68381409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68323089_68366228_68366330_68367130_68367200_68368269_68368409_68377376_68377447_68381297
ENSMUSG00000020901.14_68366307_68381684_1	chr11	+	546	6	ISM	ENSMUSG00000020901.14	ENST00000584803.1	2623	18	1683	5392	1683	-5392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGATGTAGCAGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	68366306	68381684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68366330_68367130_68367200_68368269_68368409_68377376_68377447_68381297_68381473_68381614
ENSMUSG00000020901.14_68366307_68383107_1	chr11	+	590	7	ISM	ENSMUSG00000020901.14	ENST00000611902.4	2503	19	43340	9158	1683	-3969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCTGCTGCAGCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	68366306	68383107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68366330_68367130_68367200_68368269_68368409_68377376_68377447_68381297_68381473_68382772_68382857_68383077
ENSMUSG00000020901.14_68368323_68383123_1	chr11	+	615	6	ISM	ENSMUSG00000020901.14	ENST00000584803.1	2623	18	3699	3953	3699	-3953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGATCTTGGGAGATGATG	NA	NA	NA	NA	NA	NA	NA	NA	68368322	68383123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68368409_68377376_68377447_68381297_68381473_68381614_68381769_68382772_68382857_68383077
ENSMUSG00000020901.14_68368354_68383307_1	chr11	+	614	5	ISM	ENSMUSG00000020901.14	ENST00000611902.4	2503	19	45387	8958	3730	-3769	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTCGGATGGCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	68368353	68383307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68368409_68377376_68377447_68381297_68381473_68382772_68382857_68383077
ENSMUSG00000020901.14_68381338_68383280_1	chr11	+	576	4	ISM	ENSMUSG00000020901.14	ENST00000584803.1	2623	18	16714	3796	16714	-3796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAGATGCTGACCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	68381337	68383280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68381473_68381614_68381769_68382772_68382857_68383077
ENSMUSG00000020901.14_68381380_68383498_1	chr11	+	598	3	ISM	ENSMUSG00000020901.14	ENST00000611902.4	2503	19	58413	8767	16756	-3578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGACCCAACCCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	68381379	68383498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68381473_68382772_68382857_68383077
ENSMUSG00000020901.14_68381414_68383349_1	chr11	+	569	4	ISM	ENSMUSG00000020901.14	ENST00000584803.1	2623	18	16790	3727	16790	-3727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAAACTCAGAGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	68381413	68383349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68381473_68381614_68381769_68382772_68382857_68383077
ENSMUSG00000020901.14_68381421_68383564_1	chr11	+	623	3	ISM	ENSMUSG00000020901.14	ENST00000611902.4	2503	19	58454	8701	16797	-3512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCCTCCCGGGCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	68381420	68383564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68381473_68382772_68382857_68383077
ENSMUSG00000020901.14_68381651_68383451_1	chr11	+	576	3	ISM	ENSMUSG00000020901.14	ENST00000584803.1	2623	18	17027	3625	17027	-3625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCAGTTAGTCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	68381650	68383451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68381769_68382772_68382857_68383077
ENSMUSG00000020901.14_68381699_68383507_1	chr11	+	584	3	ISM	ENSMUSG00000020901.14	ENST00000584803.1	2623	18	17075	3569	17075	-3569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGCCTCTGCGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	68381698	68383507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68381769_68382772_68382857_68383077
ENSMUSG00000020901.14_68382843_68383672_1	chr11	+	609	2	ISM	ENSMUSG00000020901.14	ENST00000584803.1	2623	18	18219	3404	18219	-3404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTCAGTGGGGATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	68382842	68383672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68382857_68383077
ENSMUSG00000020901.14_68383236_68383958_1	chr11	+	599	2	ISM	ENSMUSG00000020901.14	ENST00000584803.1	2623	18	18612	3118	18612	-3118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCCTGTGAAGAGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	68383235	68383958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68383778_68383901
ENSMUSG00000020901.14_68383347_68384410_1	chr11	+	637	3	ISM	ENSMUSG00000020901.14	ENST00000584803.1	2623	18	18723	2666	18723	-2666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTACCTCGGTATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	68383346	68384410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68383778_68383901_68384065_68384367
ENSMUSG00000020901.14_68383580_68385308_1	chr11	+	634	5	ISM	ENSMUSG00000020901.14	ENST00000584803.1	2623	18	18956	1768	18956	-1768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCACAGAGATCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	68383579	68385308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68383778_68383901_68384065_68384367_68384494_68384983_68385110_68385287
ENSMUSG00000020901.14_68383731_68385645_1	chr11	+	594	6	ISM	ENSMUSG00000020901.14	ENST00000584803.1	2623	18	19107	1431	19107	-1431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCGTCCCTCTAACACT	NA	NA	NA	NA	NA	NA	NA	NA	68383730	68385645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68383778_68383901_68384065_68384367_68384494_68384983_68385110_68385287_68385382_68385607
ENSMUSG00000020901.14_68383968_68386222_1	chr11	+	663	7	ISM	ENSMUSG00000020901.14	ENST00000584803.1	2623	18	19344	854	19344	-854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAACCCTAAATCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	68383967	68386222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68384065_68384367_68384494_68384983_68385110_68385287_68385382_68385607_68385685_68386000_68386095_68386173
ENSMUSG00000020901.14_68384429_68386785_1	chr11	+	591	7	ISM	ENSMUSG00000020901.14	ENST00000584803.1	2623	18	19805	291	19805	-291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCCTTTGCCGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	68384428	68386785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_68384494_68384983_68385110_68385287_68385382_68385607_68385685_68386000_68386095_68386173_68386257_68386733
ENSMUSG00000020901.14_68384978_68392265_1	chr11	+	634	7	NNC	ENSMUSG00000020901.14	novel	2503	19	NA	NA	20354	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGAGAGAATTAACCCCG	NA	NA	NA	NA	NA	NA	NA	NA	68384977	68392265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_68385110_68385287_68385382_68385607_68385685_68386000_68386095_68386173_68386257_68386733_68386847_68392224
ENSMUSG00000020903.14_67857019_68095228_1	chr11	+	1648	8	FSM	ENSMUSG00000020903.14	ENSMUST00000021285.14	4394	8	0	2746	0	-2746	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGTGGAGGCACATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	67857018	68095228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67902140_67902266_67911731_67911825_68000102_68000205_68094531
ENSMUSG00000020903.14_67860643_68095510_1	chr11	+	1560	7	ISM	ENSMUSG00000020903.14	ENSMUST00000021285.14	4394	8	3624	2464	3337	-2464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATACCGGGTCTACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	67860642	68095510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67860698_67864058_67864154_67875388_67875500_67902140_67902266_67911731_67911825_68000102_68000205_68094531
ENSMUSG00000020903.14_67864082_68095617_1	chr11	+	1589	6	ISM	ENSMUSG00000020903.14	ENSMUST00000021285.14	4394	8	7063	2357	6776	-2357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGCTAATGCCAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	67864081	68095617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67864154_67875388_67875500_67902140_67902266_67911731_67911825_68000102_68000205_68094531
ENSMUSG00000020904.12_67840407_67844812_1	chr11	-	268	3	ISM	ENSMUSG00000020904.12	ENSMUST00000021287.12	2199	14	11656	24773	11566	-16	internal_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGCTGGGAAGTAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	67844812	67840406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_67840523_67844306_67844444_67844797
ENSMUSG00000020904.12_67840502_67844931_1	chr11	-	292	3	ISM	ENSMUSG00000020904.12	ENSMUST00000021287.12	2199	14	11537	24868	11447	-111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAGAGATGCCATTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	67844931	67840501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_67840523_67844306_67844444_67844797
ENSMUSG00000020904.12_67844307_67844946_1	chr11	-	282	2	ISM	ENSMUSG00000020904.12	ENST00000576499.1	496	4	11432	3916	11432	-3916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACAAATTCTTACATAAC	NA	NA	NA	NA	NA	NA	NA	NA	67844946	67844306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_67844440_67844797
ENSMUSG00000020904.12_67844399_67856363_1	chr11	-	261	3	ISM	ENSMUSG00000020904.12	ENSMUST00000021287.12	2199	14	105	28765	15	-4008	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTGTCACTTCACAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	67856363	67844398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_67844444_67844797_67844998_67856347
ENSMUSG00000020910.17_66928867_66931069_1	chr11	-	430	2	ISM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	12327	0	12327	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCTGTTTGTGTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	66931069	66928866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_66929272_66931044
ENSMUSG00000020910.17_66929095_66932496_1	chr11	-	484	3	ISM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	10900	228	10900	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAACAGCTCCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	66932496	66929094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_66929272_66931044_66931162_66932306
ENSMUSG00000020910.17_66931089_66932742_1	chr11	-	509	2	ISM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	10654	2222	10654	-2222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTACATTCTCTGACACGA	NA	NA	NA	NA	NA	NA	NA	NA	66932742	66931088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_66931162_66932306
ENSMUSG00000020910.17_66932522_66942605_1	chr11	-	511	2	ISM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	791	3655	791	-3655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTAGAAGACCAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	66942605	66932521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_66932934_66942506
ENSMUSG00000020911.15_100031636_100036667_1	chr11	-	1297	6	FSM	ENSMUSG00000020911.15	ENSMUST00000007317.8	1576	6	279	0	279	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATACCTTGCTTATTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	100036667	100031635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100031994_100032105_100032232_100032348_100032511_100032877_100033035_100033251_100033335_100036256
ENSMUSG00000020914.18_98883769_98886799_1	chr11	-	1146	6	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	28216	0	28216	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCCTCTTATTTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	98886799	98883768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675
ENSMUSG00000020914.18_98883897_98888722_1	chr11	-	1233	8	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	26293	128	26293	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTGTGCTGTTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	98888722	98883896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654
ENSMUSG00000020914.18_98884034_98890045_1	chr11	-	1177	9	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	24970	265	24970	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACTCTACTCGGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	98890045	98884033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987
ENSMUSG00000020914.18_98884108_98890088_1	chr11	-	1146	9	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	24927	339	24927	-339	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCACCTTGACTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	98890088	98884107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987
ENSMUSG00000020914.18_98884163_98890145_1	chr11	-	1148	9	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	24870	394	24870	-394	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTAAGCCATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	98890145	98884162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987
ENSMUSG00000020914.18_98884638_98891830_1	chr11	-	1166	10	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	23185	869	23185	-869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCTGAGGCAGAAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	98891830	98884637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799
ENSMUSG00000020914.18_98886069_98893895_1	chr11	-	1259	10	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	21120	2300	21120	-2300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCTGGAAACGCCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	98893895	98886068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699
ENSMUSG00000020914.18_98886674_98894401_1	chr11	-	1150	9	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	20614	2905	20614	-2905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATTTTATCTAATGATA	NA	NA	NA	NA	NA	NA	NA	NA	98894401	98886673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332
ENSMUSG00000020914.18_98886726_98894450_1	chr11	-	1147	9	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	20565	2957	20565	-2957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCCTCCCATTAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	98894450	98886725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332
ENSMUSG00000020914.18_98887611_98894719_1	chr11	-	1168	9	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	20296	3842	20296	-3842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAAAGTAACGTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	98894719	98887610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651
ENSMUSG00000020914.18_98887678_98894770_1	chr11	-	1152	9	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	20245	3909	20245	-3909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTAAGCCTGTCAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	98894770	98887677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651
ENSMUSG00000020914.18_98888683_98894980_1	chr11	-	1159	9	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	20035	4914	20035	-4914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAGAGAAGAAGCAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	98894980	98888682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937
ENSMUSG00000020914.18_98890012_98895090_1	chr11	-	1182	8	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	19925	6243	19925	-6243	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAATTAGGAAGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	98895090	98890011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937
ENSMUSG00000020914.18_98891633_98896920_1	chr11	-	1152	8	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	18095	7864	18095	-7864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGAAGATCTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	98896920	98891632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828
ENSMUSG00000020914.18_98891868_98897854_1	chr11	-	1165	8	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	17161	8099	17161	-8099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGACATGCCCCTGTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	98897854	98891867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785
ENSMUSG00000020914.18_98892213_98898072_1	chr11	-	1156	8	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	16943	8444	16943	-8444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCTGTGAAAGCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	98898072	98892212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006
ENSMUSG00000020914.18_98893856_98900476_1	chr11	-	1148	9	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	14539	10087	14539	-10087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTTGGATATTCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	98900476	98893855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415
ENSMUSG00000020914.18_98894451_98900895_1	chr11	-	1187	10	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	14120	10682	14120	-10682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATACCACTGTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	98900895	98894450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853
ENSMUSG00000020914.18_98894728_98901359_1	chr11	-	1157	10	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	13656	10959	13656	-10959	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAATGGAGAAGTAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	98901359	98894727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299
ENSMUSG00000020914.18_98894972_98901745_1	chr11	-	1144	10	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	13270	11203	13270	-11203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCTTCTGGATGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	98901745	98894971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731
ENSMUSG00000020914.18_98895103_98902874_1	chr11	-	1185	11	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	12141	11334	12141	-11334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGTGTTGAGCCTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	98902874	98895102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846
ENSMUSG00000020914.18_98897819_98905339_1	chr11	-	1146	10	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	9676	14050	9676	-14050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCAGAAATGTCCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	98905339	98897818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240
ENSMUSG00000020914.18_98898100_98905752_1	chr11	-	1146	11	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	9263	14331	9263	-14331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGTACCTGACCTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	98905752	98898099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711
ENSMUSG00000020914.18_98900474_98906916_1	chr11	-	1169	10	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	8099	16705	8099	-16705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACATCGTATTCAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	98906916	98900473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853
ENSMUSG00000020914.18_98900912_98907316_1	chr11	-	1164	9	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	7699	17143	7699	-17143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCATCTCTTCTGCGAC	NA	NA	NA	NA	NA	NA	NA	NA	98907316	98900911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255
ENSMUSG00000020914.18_98901358_98909690_1	chr11	-	1159	9	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	5325	17589	5325	-17589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGAAGATTCATTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	98909690	98901357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621
ENSMUSG00000020914.18_98901406_98909745_1	chr11	-	1166	9	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	5270	17637	5270	-17637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAATATCATCAAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	98909745	98901405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621
ENSMUSG00000020914.18_98901851_98913199_1	chr11	-	1147	10	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	1816	18082	1816	-18082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAGACTCAGCAAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	98913199	98901850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165
ENSMUSG00000020914.18_98902923_98913726_1	chr11	-	1150	10	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	1289	19154	1289	-19154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAACAAGAAGTGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	98913726	98902922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665
ENSMUSG00000020914.18_98905332_98915004_1	chr11	-	1221	10	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	11	21563	11	-21563	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTTTGACTCTCAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	98915004	98905331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ENSMUSG00000020917.18_100367329_100410520_1	chr11	-	3561	24	ISM	ENSMUSG00000020917.18	ENSMUST00000165111.8	4162	27	3904	145	3904	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGACTTGTCTGTTACTG	NA	NA	NA	NA	NA	NA	NA	NA	100410520	100367328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440
ENSMUSG00000020917.18_100367378_100410594_1	chr11	-	3586	24	ISM	ENSMUSG00000020917.18	ENSMUST00000165111.8	4162	27	3830	194	3830	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAAAAGCTGTGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	100410594	100367377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440
ENSMUSG00000020917.18_100367729_100414424_1	chr11	-	3617	27	FSM	ENSMUSG00000020917.18	ENSMUST00000165111.8	4162	27	0	545	0	-545	multi-exon	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAATTAGTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	100414424	100367728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265
ENSMUSG00000020918.15_100595572_100599811_1	chr11	-	1718	10	ISM	ENSMUSG00000020918.15	ENSMUST00000006973.12	3043	18	3480	0	3480	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	100599811	100595571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671
ENSMUSG00000020918.15_100597176_100600315_1	chr11	-	937	7	ISM	ENSMUSG00000020918.15	ENSMUST00000006973.12	3043	18	2976	1604	2976	-1604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTATGTCTATGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	100600315	100597175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208
ENSMUSG00000020918.15_100597733_100603101_1	chr11	-	1676	12	ISM	ENSMUSG00000020918.15	ENSMUST00000103118.4	3046	18	190	2161	190	-2161	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCACCTATGCTGACG	NA	NA	NA	NA	NA	NA	NA	NA	100603101	100597732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100597795_100599034_100599162_100599372_100599582_100599671_100599812_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ENSMUSG00000020921.7_102043502_102046621_1	chr11	-	1138	3	ISM	ENSMUSG00000020921.7	ENSMUST00000021296.7	1574	4	609	130	609	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGAGCAGGCCTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	102046621	102043501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102044421_102045382_102045530_102046549
ENSMUSG00000020921.7_102043797_102047173_1	chr11	-	1092	4	FSM	ENSMUSG00000020921.7	ENSMUST00000021296.7	1574	4	57	425	57	-425	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGACAGAGGAAGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	102047173	102043796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_102044421_102045382_102045530_102046549_102046731_102047033
ENSMUSG00000020922.12_102054093_102056222_1	chr11	-	938	2	ISM	ENSMUSG00000020922.12	ENSMUST00000107156.9	2015	4	19833	770	19833	-770	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACTATATGTACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	102056222	102054092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102054994_102056185
ENSMUSG00000020922.12_102054144_102056274_1	chr11	-	939	2	ISM	ENSMUSG00000020922.12	ENSMUST00000107156.9	2015	4	19781	821	19781	-821	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGTGCAGACGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	102056274	102054143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102054994_102056185
ENSMUSG00000020922.12_102054207_102056312_1	chr11	-	914	2	ISM	ENSMUSG00000020922.12	ENSMUST00000107156.9	2015	4	19743	884	19743	-884	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCAGAACCCGACGATTA	NA	NA	NA	NA	NA	NA	NA	NA	102056312	102054206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102054994_102056185
ENSMUSG00000020922.12_102054373_102073707_1	chr11	-	882	4	ISM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	2415	1050	2348	-1050	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTTGAATTAGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	102073707	102054372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683
ENSMUSG00000020922.12_102054430_102073817_1	chr11	-	935	4	ISM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	2305	1107	2238	-1107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGAATTTTTCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	102073817	102054429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683
ENSMUSG00000020922.12_102054566_102076055_1	chr11	-	946	5	FSM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	67	1243	0	-1243	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCCTGATTTTATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	102076055	102054565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
ENSMUSG00000020923.18_102196750_102204749_1	chr11	-	2453	16	ISM	ENSMUSG00000020923.18	ENSMUST00000107115.8	3199	19	2781	0	1118	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	102204749	102196749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723
ENSMUSG00000020923.18_102197124_102207247_1	chr11	-	2542	19	FSM	ENSMUSG00000020923.18	ENSMUST00000107115.8	3199	19	283	374	259	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGGGTGGGAGAGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	102207247	102197123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
ENSMUSG00000020923.18_102197467_102201862_1	chr11	-	1557	14	NNC	ENSMUSG00000020923.18	novel	2163	19	NA	NA	4005	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCAGCCTCCACCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	102201862	102197466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_102197593_102197681_102197802_102197904_102197977_102198069_102198118_102198774_102198952_102199054_102199142_102199524_102199636_102199719_102199837_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751
ENSMUSG00000020923.18_102197467_102201862_2	chr11	-	1559	14	ISM	ENSMUSG00000020923.18	ENST00000428234.1	2163	19	4005	0	4005	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCAGCCTCCACCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	102201862	102197466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102197593_102197681_102197802_102197904_102197977_102198069_102198118_102198774_102198952_102199054_102199144_102199524_102199636_102199719_102199837_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751
ENSMUSG00000020923.18_102197533_102202328_1	chr11	-	1616	15	ISM	ENSMUSG00000020923.18	ENST00000428234.1	2163	19	3539	66	3539	-66	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGAGGGCAGTAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	102202328	102197532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102197593_102197681_102197802_102197904_102197977_102198069_102198118_102198774_102198952_102199054_102199144_102199524_102199636_102199719_102199837_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205
ENSMUSG00000020923.18_102197682_102202328_1	chr11	-	1550	14	NNC	ENSMUSG00000020923.18	novel	2163	19	NA	NA	3539	-215	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCAGGAGGCGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	102202328	102197681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_102197802_102197904_102197977_102198069_102198118_102198774_102198952_102199054_102199144_102199524_102199636_102199719_102199831_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205
ENSMUSG00000020923.18_102197785_102202646_1	chr11	-	1518	15	ISM	ENSMUSG00000020923.18	ENST00000428234.1	2163	19	3221	318	3221	-318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAGGAGGAAGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	102202646	102197784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102197802_102197904_102197977_102198069_102198118_102198774_102198952_102199054_102199144_102199524_102199636_102199719_102199837_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579
ENSMUSG00000020923.18_102197931_102204790_1	chr11	-	1540	15	ISM	ENSMUSG00000020923.18	ENST00000428234.1	2163	19	1077	464	1077	-464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGACCACCCTGCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	102204790	102197930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102197977_102198069_102198118_102198774_102198952_102199054_102199144_102199524_102199636_102199719_102199837_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723
ENSMUSG00000020923.18_102198070_102204881_1	chr11	-	1583	14	NNC	ENSMUSG00000020923.18	novel	2163	19	NA	NA	986	-603	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCAGGAGCACAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	102204881	102198069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_102198118_102198774_102198952_102199054_102199142_102199524_102199636_102199719_102199837_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723
ENSMUSG00000020923.18_102198775_102205050_1	chr11	-	1621	14	ISM	ENSMUSG00000020923.18	ENST00000428234.1	2163	19	817	1308	817	-1308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGAGAGAGGACAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	102205050	102198774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102198952_102199054_102199144_102199524_102199636_102199719_102199837_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964
ENSMUSG00000020923.18_102198849_102205014_1	chr11	-	1509	14	NNC	ENSMUSG00000020923.18	novel	2163	19	NA	NA	853	-1382	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGGAGCACTATAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	102205014	102198848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_102198952_102199054_102199142_102199524_102199636_102199719_102199837_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964
ENSMUSG00000020923.18_102198913_102205725_1	chr11	-	1517	15	ISM	ENSMUSG00000020923.18	ENST00000428234.1	2163	19	142	1446	142	-1446	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCCGCTGAAGGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	102205725	102198912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102198952_102199054_102199144_102199524_102199636_102199719_102199837_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689
ENSMUSG00000020923.18_102199075_102205800_1	chr11	-	1528	14	NNC	ENSMUSG00000020923.18	novel	2163	19	NA	NA	67	-1608	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCCAAGAAACCTCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	102205800	102199074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_102199144_102199524_102199636_102199719_102199837_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205044_102205689
ENSMUSG00000020923.18_102199129_102205847_1	chr11	-	1526	14	ISM	ENSMUSG00000020923.18	ENST00000428234.1	2163	19	20	1662	20	-1662	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCGGGCCCCTCCAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	102205847	102199128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102199144_102199524_102199636_102199719_102199837_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689
ENSMUSG00000020923.18_102199529_102205859_1	chr11	-	1518	13	NNC	ENSMUSG00000020923.18	novel	2163	19	NA	NA	8	-2062	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGGGAAGGGGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	102205859	102199528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_102199636_102199719_102199837_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205044_102205685
ENSMUSG00000020925.17_102576242_102581105_1	chr11	-	1218	3	NNC	ENSMUSG00000020925.17	novel	2366	5	NA	NA	7455	-728	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCCTGCAGGCATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	102581105	102576241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_102577323_102579626_102579681_102581022
ENSMUSG00000020925.17_102576366_102588362_2	chr11	-	1266	5	FSM	ENSMUSG00000020925.17	ENSMUST00000164506.3	2316	5	198	852	198	-852	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAATCTGTGATTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	102588362	102576365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_102577323_102579626_102579688_102581028_102581163_102582936_102583025_102588336
ENSMUSG00000020925.17_102576582_102588496_3	chr11	-	1184	5	FSM	ENSMUSG00000020925.17	ENSMUST00000164506.3	2316	5	64	1068	64	-1068	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTGACATCAAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	102588496	102576581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_102577323_102579626_102579688_102581028_102581163_102582936_102583025_102588336
ENSMUSG00000020925.17_102576582_102588608_1	chr11	-	1296	5	FSM	ENSMUSG00000020925.17	ENSMUST00000164506.3	2316	5	-48	1068	0	-1068	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTGACATCAAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	102588608	102576581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_102577323_102579626_102579688_102581028_102581163_102582936_102583025_102588336
ENSMUSG00000020925.17_102576582_102588608_3	chr11	-	1293	5	NNC	ENSMUSG00000020925.17	novel	2366	5	NA	NA	0	-1068	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTGACATCAAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	102588608	102576581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_102577323_102579626_102579681_102581024_102581163_102582936_102583025_102588336
ENSMUSG00000020929.15_102729303_102753603_1	chr11	-	2541	19	ISM	ENSMUSG00000020929.15	ENSMUST00000173679.8	2889	27	14937	-324	14937	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTTGGTTTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	102753603	102729302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436
ENSMUSG00000020929.15_102729404_102755616_1	chr11	-	2523	20	ISM	ENSMUSG00000020929.15	ENSMUST00000173679.8	2889	27	12924	-223	12924	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTAACCCTAAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	102755616	102729403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533
ENSMUSG00000020929.15_102729627_102759996_1	chr11	-	2569	24	ISM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	11797	328	8544	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGGGGCTGGCAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	102759996	102729626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920
ENSMUSG00000020929.15_102729975_102761080_1	chr11	-	2561	24	ISM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	10713	676	7460	-348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTCTTTTAACCATT	NA	NA	NA	NA	NA	NA	NA	NA	102761080	102729974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993
ENSMUSG00000020929.15_102730063_102761899_1	chr11	-	2519	25	ISM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	9894	764	6641	-436	internal_fragment	TRUE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGAGCATTGTCATTCG	NA	NA	NA	NA	NA	NA	NA	NA	102761899	102730062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845
ENSMUSG00000020929.15_102730276_102761957_1	chr11	-	2526	24	ISM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	9836	977	6583	-649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCCTGTCTGTCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	102761957	102730275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845
ENSMUSG00000020929.15_102730276_102761976_1	chr11	-	2529	23	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	6564	-649	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCCTGTCTGTCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	102761976	102730275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756507_102759412_102759479_102759920_102759997_102760993_102761073_102761845
ENSMUSG00000020929.15_102730849_102768544_1	chr11	-	2563	24	ISM	ENSMUSG00000020929.15	ENSMUST00000107060.8	3339	28	3267	1550	-4	-1222	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCAGCCTGTTGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	102768544	102730848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762009_102768435
ENSMUSG00000020929.15_102730849_102768545_1	chr11	-	2558	24	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	-5	-1222	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	302	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCAGCCTGTTGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	102768545	102730848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762003_102768435
ENSMUSG00000020929.15_102731037_102771797_1	chr11	-	2597	24	ISM	ENSMUSG00000020929.15	ENSMUST00000107060.8	3339	28	14	1738	-4	-1410	5prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAAGGCAGAGGCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	102771797	102731036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762009_102768435_102768545_102771720
ENSMUSG00000020935.9_102884873_102907994_1	chr11	-	1738	5	NNC	ENSMUSG00000020935.9	novel	1744	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAATTCCACTTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	102907994	102884872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_102885999_102888184_102888267_102890469_102890674_102890975_102891183_102907875
ENSMUSG00000020935.9_102884873_102907994_2	chr11	-	1736	5	NNC	ENSMUSG00000020935.9	novel	1744	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAATTCCACTTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	102907994	102884872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_102885999_102888178_102888267_102890469_102890666_102890975_102891183_102907875
ENSMUSG00000020935.9_102885659_102919089_1	chr11	-	948	5	FSM	ENSMUSG00000020935.9	ENST00000342350.9	875	5	-73	0	-73	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTAGGTACCATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	102919089	102885658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891173_102918970
ENSMUSG00000020936.9_102919172_102959738_1	chr11	+	4852	12	NNC	ENSMUSG00000020936.9	novel	4861	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCCTGGTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	102919171	102959738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950912_102951075_102954633_102954802_102955555_102955694_102956573
ENSMUSG00000020937.15_102961411_102965495_1	chr11	-	1026	6	ISM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	26989	281	26989	-281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGAGCAGGACACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	102965495	102961410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384
ENSMUSG00000020937.15_102961638_102965798_1	chr11	-	955	7	ISM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	26686	508	26686	-508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCTGGCGTCGTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	102965798	102961637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682
ENSMUSG00000020937.15_102961937_102968353_1	chr11	-	966	8	ISM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	24131	807	24131	-807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGTGCTGGTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	102968353	102961936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307
ENSMUSG00000020937.15_102962474_102968684_1	chr11	-	971	7	ISM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	23800	1344	23800	-1344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGGTGAGTCGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	102968684	102962473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586
ENSMUSG00000020937.15_102964602_102969170_1	chr11	-	973	7	ISM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	23314	3472	23314	-3472	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCAACTATAACCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	102969170	102964601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064
ENSMUSG00000020937.15_102965428_102969281_1	chr11	-	972	6	ISM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	23203	4298	23203	-4298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTCAGCGAGCGCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	102969281	102965427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064
ENSMUSG00000020937.15_102965697_102970464_1	chr11	-	961	6	ISM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	22020	4567	22020	-4567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAGGAGTCGAGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	102970464	102965696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365
ENSMUSG00000020937.15_102968380_102971452_1	chr11	-	986	6	ISM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	21032	7250	21032	-7250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCCACACGCTCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	102971452	102968379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329
ENSMUSG00000020941.8_103111852_103133097_1	chr11	-	2729	15	ISM	ENSMUSG00000020941.8	ENST00000617331.3	2996	16	20469	0	20469	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTCTTCCACCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	103133097	103111851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103112016_103112324_103112426_103115071_103115217_103115859_103115967_103116115_103116449_103117812_103117964_103118357_103118522_103121157_103121263_103121857_103121990_103122182_103122313_103128323_103128462_103129757_103130379_103130457_103130669_103131862_103131933_103132940
ENSMUSG00000020941.8_103112398_103153462_1	chr11	-	2655	15	ISM	ENSMUSG00000020941.8	ENST00000617331.3	2996	16	104	546	104	-546	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCGAACACCTGCATATCC	NA	NA	NA	NA	NA	NA	NA	NA	103153462	103112397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103112426_103115071_103115217_103115859_103115967_103116115_103116449_103117812_103117964_103118357_103118522_103121157_103121263_103121857_103121990_103122182_103122313_103128323_103128462_103129757_103130379_103130457_103130669_103131862_103131933_103132940_103133216_103153417
ENSMUSG00000020946.14_103569307_103588535_1	chr11	-	1501	6	FSM	ENSMUSG00000020946.14	ENST00000623037.2	1510	6	9	0	1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	5849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGCAATGGGCGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	103588535	103569306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_103570224_103574561_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ENSMUSG00000020946.14_103569307_103588535_2	chr11	-	1445	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	189	1632	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGCAATGGGCGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	103588535	103569306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ENSMUSG00000020946.14_103569552_103588724_1	chr11	-	1389	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	0	1877	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTGGAAGCAGCTACTC	NA	NA	NA	NA	NA	NA	NA	NA	103588724	103569551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ENSMUSG00000020946.14_103569759_103577540_1	chr11	-	739	3	ISM	ENSMUSG00000020946.14	ENST00000640138.1	1246	4	2595	452	2595	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGTGAGGCTTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	103577540	103569758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103570224_103574617_103574759_103577407
ENSMUSG00000020946.14_103569759_103578391_1	chr11	-	639	3	ISM	ENSMUSG00000020946.14	ENSMUST00000107013.3	1044	5	10129	207	1744	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGTGAGGCTTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	103578391	103569758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103570224_103577407_103577541_103578350
ENSMUSG00000020946.14_103569864_103580102_1	chr11	-	656	4	FSM	ENSMUSG00000020946.14	ENST00000640138.1	1246	4	33	557	33	-312	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCTTAGGAAGTGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	103580102	103569863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103580080
ENSMUSG00000020946.14_103570047_103588524_1	chr11	-	553	5	FSM	ENSMUSG00000020946.14	ENSMUST00000107013.3	1044	5	-4	495	-4	-495	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGACAGCCTTCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	103588524	103570046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_103570224_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ENSMUSG00000020946.14_103570059_103588524_1	chr11	-	676	6	FSM	ENSMUSG00000020946.14	ENST00000576910.7	1440	6	12	752	-4	-507	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTACCCAGCACTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	103588524	103570058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578454_103580080_103580146_103588455
ENSMUSG00000020946.14_103570110_103588547_1	chr11	-	513	5	FSM	ENSMUSG00000020946.14	ENSMUST00000107013.3	1044	5	-27	558	2	-558	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCACTTGTGCAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	103588547	103570109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_103570224_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ENSMUSG00000020946.14_103573884_103588535_1	chr11	-	901	6	FSM	ENSMUSG00000020946.14	ENST00000415811.7	902	6	1	0	1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGGTGCTCCCCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	103588535	103573883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_103574260_103574617_103574759_103577407_103577541_103578350_103578457_103580080_103580146_103588455
ENSMUSG00000020949.10_65109198_65120781_1	chr12	-	1012	7	NNC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	65120781	65109197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_65109515_65110451_65110540_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
ENSMUSG00000020949.10_65109198_65120781_2	chr12	-	1018	7	NNC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	65120781	65109197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_65109515_65110451_65110550_65112510_65112571_65113411_65113552_65115775_65115884_65116724_65116827_65120588
ENSMUSG00000020949.10_65109198_65120781_3	chr12	-	1017	7	NNC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	65120781	65109197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116729_65116827_65120588
ENSMUSG00000020949.10_65109198_65120781_4	chr12	-	1017	7	NNC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	65120781	65109197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115875_65116720_65116827_65120588
ENSMUSG00000020952.11_51430885_51496761_1	chr12	+	1766	21	FSM	ENSMUSG00000020952.11	ENST00000679165.1	1766	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGATATGTCCTTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	51430884	51496761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51494354_51494424_51496689
ENSMUSG00000020952.11_51430885_51496885_1	chr12	+	1890	23	NNC	ENSMUSG00000020952.11	novel	1893	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTATTCTTGTTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	51430884	51496885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_51430959_51433832_51433922_51437150_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ENSMUSG00000020952.11_51430885_51496885_2	chr12	+	1893	23	FSM	ENSMUSG00000020952.11	ENST00000678669.1	1893	23	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTATTCTTGTTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	51430884	51496885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_51430959_51433832_51433922_51437147_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ENSMUSG00000020952.11_51433830_51496761_1	chr12	+	1376	18	NNC	ENSMUSG00000020952.11	novel	1380	18	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2082	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGATATGTCCTTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	51433829	51496761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51469689_51469787_51472820_51472892_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491771_51491801_51492453_51492520_51494354_51494424_51496689
ENSMUSG00000020952.11_51433830_51496761_2	chr12	+	1353	15	FSM	ENSMUSG00000020952.11	ENST00000553693.6	1352	15	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGATATGTCCTTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	51433829	51496761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51496689
ENSMUSG00000020952.11_51433830_51496761_3	chr12	+	1381	18	FSM	ENSMUSG00000020952.11	ENST00000676954.1	1380	18	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGATATGTCCTTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	51433829	51496761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51469689_51469787_51472820_51472892_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ENSMUSG00000020953.18_51642128_51650006_1	chr12	+	896	8	ISM	ENSMUSG00000020953.18	ENSMUST00000085412.7	2456	12	1988	2538	9	-2538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATCACATGCCCAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	51642127	51650006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_51642275_51643226_51643361_51643797_51643861_51644810_51644856_51644934_51645083_51648596_51648701_51649429_51649657_51649978
ENSMUSG00000020953.18_51642195_51650048_1	chr12	+	871	8	ISM	ENSMUSG00000020953.18	ENSMUST00000085412.7	2456	12	2055	2496	76	-2496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTGGTGCAGAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	51642194	51650048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_51642275_51643226_51643361_51643797_51643861_51644810_51644856_51644934_51645083_51648596_51648701_51649429_51649657_51649978
ENSMUSG00000020953.18_51642250_51650108_1	chr12	+	876	8	ISM	ENSMUSG00000020953.18	ENSMUST00000085412.7	2456	12	2110	2436	131	-2436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGTGAACATTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	51642249	51650108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_51642275_51643226_51643361_51643797_51643861_51644810_51644856_51644934_51645083_51648596_51648701_51649429_51649657_51649978
ENSMUSG00000020953.18_51644806_51650296_1	chr12	+	847	5	ISM	ENSMUSG00000020953.18	ENSMUST00000085412.7	2456	12	4666	2248	2687	-2248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGAACGTCCTAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	51644805	51650296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_51644856_51644934_51645083_51648596_51648701_51649429_51649657_51649978
ENSMUSG00000020953.18_51648642_51656494_1	chr12	+	866	4	ISM	ENSMUSG00000020953.18	ENST00000475087.5	1538	9	6523	81	6523	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGCTACTCTTGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	51648641	51656494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_51648701_51649429_51649657_51649978_51650496_51656431
ENSMUSG00000020954.17_51656935_51676212_1	chr12	-	1027	9	ISM	ENSMUSG00000020954.17	ENSMUST00000169503.4	2791	16	62468	507	62458	-507	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATCGCCAGTGCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	51676212	51656934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156
ENSMUSG00000020955.10_51737816_51785385_1	chr12	+	697	5	NIC	ENSMUSG00000020955.10	novel	1035	6	NA	NA	-4	-330	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCTGCATTGTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	51737815	51785385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr12_+_51738098_51763724_51763934_51767418_51767506_51769762_51769832_51785335
ENSMUSG00000020955.10_51763822_51785715_1	chr12	+	648	4	NIC	ENSMUSG00000020955.10	novel	1035	6	NA	NA	26002	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGACGTTTGAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	51763821	51785715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr12_+_51763934_51767418_51767506_51769762_51769832_51785335
ENSMUSG00000020956.15_52046046_52053284_1	chr12	-	808	3	FSM	ENSMUSG00000020956.15	ENSMUST00000021339.8	2564	3	0	1756	0	-1756	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGACAGGCAGAGCTACAT	NA	NA	NA	NA	NA	NA	NA	NA	52053284	52046045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_52046657_52051661_52051732_52053157
ENSMUSG00000020956.15_52046106_52053284_1	chr12	-	748	3	FSM	ENSMUSG00000020956.15	ENSMUST00000021339.8	2564	3	0	1816	0	-1816	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCAGAGGCTGGAGGATC	NA	NA	NA	NA	NA	NA	NA	NA	52053284	52046105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_52046657_52051661_52051732_52053157
ENSMUSG00000020962.15_91525731_91529739_1	chr12	-	952	2	ISM	ENSMUSG00000020962.15	ENSMUST00000063314.7	2265	9	27522	269	27044	-269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTCAGGAATCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	91529739	91525730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_91526626_91529682
ENSMUSG00000020962.15_91525854_91534404_1	chr12	-	953	3	ISM	ENSMUSG00000020962.15	ENSMUST00000063314.7	2265	9	22857	392	22379	-392	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTTGTTAAATGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	91534404	91525853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_91526626_91529682_91529773_91534313
ENSMUSG00000020962.15_91525953_91534500_1	chr12	-	950	3	ISM	ENSMUSG00000020962.15	ENSMUST00000063314.7	2265	9	22761	491	22283	-491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTGAACATCTACGTAA	NA	NA	NA	NA	NA	NA	NA	NA	91534500	91525952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_91526626_91529682_91529773_91534313
ENSMUSG00000020962.15_91526171_91535023_1	chr12	-	979	4	ISM	ENSMUSG00000020962.15	ENSMUST00000063314.7	2265	9	22238	709	21760	-709	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACCCGAAGAATTACCC	NA	NA	NA	NA	NA	NA	NA	NA	91535023	91526170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910
ENSMUSG00000020962.15_91526418_91542419_1	chr12	-	959	7	ISM	ENSMUSG00000020962.15	ENSMUST00000063314.7	2265	9	14842	956	14364	-956	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCAGAAAGGCGCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	91542419	91526417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357
ENSMUSG00000020962.15_91534358_91556413_1	chr12	-	970	7	ISM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	370	12322	370	-8896	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGATAAAGAGAAAGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	91556413	91534357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
ENSMUSG00000020962.15_91534561_91556628_1	chr12	-	982	7	ISM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	155	12525	155	-9099	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAATAAGACTCAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	91556628	91534560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
ENSMUSG00000020962.15_91534970_91556783_1	chr12	-	1004	6	ISM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	0	12934	0	-9508	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAACAAGTTATACCACAA	NA	NA	NA	NA	NA	NA	NA	NA	91556783	91534969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
ENSMUSG00000020973.8_69235861_69245203_1	chr12	-	3385	3	NNC	ENSMUSG00000020973.8	novel	3390	3	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTTACCTACATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	69245203	69235860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_69237169_69239581_69239721_69243265
ENSMUSG00000020973.8_69235861_69245203_2	chr12	-	3384	3	NNC	ENSMUSG00000020973.8	novel	3390	3	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTTACCTACATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	69245203	69235860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_69237163_69239581_69239726_69243265
ENSMUSG00000020974.7_69248547_69259045_1	chr12	-	1042	11	ISM	ENSMUSG00000020974.7	ENSMUST00000021359.7	1706	19	15924	0	15908	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTACACATTGTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	69259045	69248546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996
ENSMUSG00000020974.7_69249684_69274953_2	chr12	-	1499	17	FSM	ENSMUSG00000020974.7	ENST00000539565.6	1524	17	25	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTAAGCATGCTCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	69274953	69249683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269877_69269954_69273111_69273213_69274870
ENSMUSG00000020974.7_69249684_69274953_3	chr12	-	1494	17	NNC	ENSMUSG00000020974.7	novel	1524	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTAAGCATGCTCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	69274953	69249683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269877_69269954_69273111_69273208_69274870
ENSMUSG00000020974.7_69249684_69274953_4	chr12	-	1491	17	NNC	ENSMUSG00000020974.7	novel	1524	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTAAGCATGCTCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	69274953	69249683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259768_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269877_69269954_69273111_69273213_69274870
ENSMUSG00000020978.11_69343529_69357461_1	chr12	+	1872	13	FSM	ENSMUSG00000020978.11	ENSMUST00000021362.5	1905	13	33	0	33	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGACTTTTTATCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	69343528	69357461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
ENSMUSG00000020978.11_69343529_69357461_2	chr12	+	1864	13	NNC	ENSMUSG00000020978.11	novel	1905	13	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGACTTTTTATCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	69343528	69357461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352564_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
ENSMUSG00000020978.11_69343529_69357461_3	chr12	+	1866	13	NNC	ENSMUSG00000020978.11	novel	1905	13	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGACTTTTTATCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	69343528	69357461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352407_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
ENSMUSG00000020978.11_69343529_69357461_4	chr12	+	1867	13	NNC	ENSMUSG00000020978.11	novel	1905	13	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGACTTTTTATCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	69343528	69357461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356809_69356926
ENSMUSG00000020978.11_69343529_69357461_5	chr12	+	1866	13	NNC	ENSMUSG00000020978.11	novel	1905	13	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGACTTTTTATCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	69343528	69357461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356932
ENSMUSG00000020978.11_69349175_69357025_1	chr12	+	833	10	ISM	ENSMUSG00000020978.11	ENST00000554589.5	1343	12	5419	187	5419	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAACAACACTTCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	69349174	69357025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356926
ENSMUSG00000020978.11_69349175_69357071_1	chr12	+	879	10	ISM	ENSMUSG00000020978.11	ENST00000554589.5	1343	12	5419	141	5419	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCCACTTGCATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	69349174	69357071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356926
ENSMUSG00000020978.11_69350306_69357213_1	chr12	+	982	9	ISM	ENSMUSG00000020978.11	ENST00000554589.5	1343	12	6550	-1	6550	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTACAATAAATGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	69350305	69357213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356926
ENSMUSG00000020982.10_69357296_69364845_1	chr12	-	2135	8	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	39094	0	39094	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	69364845	69357295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800
ENSMUSG00000020982.10_69357649_69368980_1	chr12	-	2090	11	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	34959	353	34959	-353	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTTGCAGTGCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	69368980	69357648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874
ENSMUSG00000020982.10_69358111_69374479_1	chr12	-	2082	15	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	29460	815	29460	-815	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGTGTTGGAATTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	69374479	69358110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407
ENSMUSG00000020982.10_69358239_69378663_1	chr12	-	2076	17	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	25276	943	25276	-943	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTCCCAACCCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	69378663	69358238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645
ENSMUSG00000020982.10_69358431_69387716_1	chr12	-	2175	20	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	16223	1135	16223	-1135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCACGAGAGGTTTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	69387716	69358430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664
ENSMUSG00000020982.10_69358564_69387770_1	chr12	-	2096	20	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	16169	1268	16169	-1268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTATTGTTCTACATT	NA	NA	NA	NA	NA	NA	NA	NA	69387770	69358563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664
ENSMUSG00000020982.10_69358643_69387828_1	chr12	-	2075	20	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	16111	1347	16111	-1347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAGTTTTATATATATC	NA	NA	NA	NA	NA	NA	NA	NA	69387828	69358642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664
ENSMUSG00000020982.10_69358800_69388184_1	chr12	-	2078	21	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	15755	1504	15755	-1504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGCATGTGAAGAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	69388184	69358799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046
ENSMUSG00000020982.10_69359424_69391516_1	chr12	-	2090	21	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	12423	2128	12423	-2128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACAGGGCAGCCACATC	NA	NA	NA	NA	NA	NA	NA	NA	69391516	69359423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453
ENSMUSG00000020982.10_69363159_69395641_1	chr12	-	2074	22	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	8298	5863	8298	-5863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATGAACCTGTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69395641	69363158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624
ENSMUSG00000020982.10_69364870_69400632_1	chr12	-	2076	22	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	3307	7574	3307	-7574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTGAAGCTTACCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69400632	69364869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567
ENSMUSG00000020982.10_69364929_69400692_1	chr12	-	2077	22	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	3247	7633	3247	-7633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCAGGGGATTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	69400692	69364928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567
ENSMUSG00000020982.10_69369050_69403082_1	chr12	-	2066	22	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	857	11754	857	-11754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATCAAGAGGACATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	69403082	69369049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052
ENSMUSG00000020986.14_59005708_59015679_1	chr12	-	1312	3	ISM	ENSMUSG00000020986.14	ENSMUST00000165134.2	2529	18	38342	-782	38342	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATCAGACGACGGCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	59015679	59005707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_59006873_59013765_59013832_59015598
ENSMUSG00000020986.14_59019776_59048683_1	chr12	-	1266	12	ISM	ENSMUSG00000020986.14	ENSMUST00000165134.2	2529	18	5338	13286	5338	-13286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGAGAGTTCATACTATC	NA	NA	NA	NA	NA	NA	NA	NA	59048683	59019775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604
ENSMUSG00000020986.14_59038916_59058803_1	chr12	-	1179	8	ISM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	0	33747	0	14860	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTAATTTTTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	59058803	59038915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ENSMUSG00000020986.14_59053833_59058688_1	chr12	-	296	2	FSM	ENSMUSG00000020986.14	ENST00000553970.1	463	2	110	57	105	-57	multi-exon	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGAGCCTGTCCTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	59058688	59053832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_59054022_59058581
ENSMUSG00000020986.14_59053900_59058803_1	chr12	-	344	2	FSM	ENSMUSG00000020986.14	ENST00000553970.1	463	2	-5	124	0	-124	multi-exon	FALSE	canonical	NA	NA	NA	NA	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTTGTCCCAGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	59058803	59053899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_59054022_59058581
ENSMUSG00000020988.10_69753888_69768157_1	chr12	-	459	3	ISM	ENSMUSG00000020988.10	ENST00000555610.1	657	4	812	0	812	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATCTTCTCTACAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	69768157	69753887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_69754124_69759376_69759528_69768085
ENSMUSG00000020988.10_69753888_69768157_2	chr12	-	458	3	NNC	ENSMUSG00000020988.10	novel	657	4	NA	NA	812	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2088	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATCTTCTCTACAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	69768157	69753887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_69754124_69759377_69759528_69768085
ENSMUSG00000020988.10_69753996_69768961_1	chr12	-	541	4	FSM	ENSMUSG00000020988.10	ENST00000555610.1	657	4	8	108	8	-108	multi-exon	FALSE	canonical	NA	NA	NA	NA	2079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCAGGATTTCCAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	69768961	69753995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_69754124_69759376_69759528_69768085_69768238_69768851
ENSMUSG00000020988.10_69754039_69768961_1	chr12	-	498	4	FSM	ENSMUSG00000020988.10	ENST00000555610.1	657	4	8	151	8	-151	multi-exon	FALSE	canonical	NA	NA	NA	NA	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACACCGGCATTGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	69768961	69754038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_69754124_69759376_69759528_69768085_69768238_69768851
ENSMUSG00000020988.10_69754071_69768961_1	chr12	-	465	4	NNC	ENSMUSG00000020988.10	novel	657	4	NA	NA	8	-183	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTAGGGTCTAATGG	NA	NA	NA	NA	NA	NA	NA	NA	69768961	69754070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_69754124_69759376_69759528_69768085_69768238_69768852
ENSMUSG00000020993.10_59090233_59097085_1	chr12	-	440	4	ISM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	11162	355	10941	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTAAACATCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	59097085	59090232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053
ENSMUSG00000020993.10_59090292_59097132_1	chr12	-	428	4	ISM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	11115	414	10894	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTGACTGACCTATTC	NA	NA	NA	NA	NA	NA	NA	NA	59097132	59090291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053
ENSMUSG00000020993.10_59090292_59097171_1	chr12	-	467	4	ISM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	11076	414	10855	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTGACTGACCTATTC	NA	NA	NA	NA	NA	NA	NA	NA	59097171	59090291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053
ENSMUSG00000020993.10_59091038_59108019_1	chr12	-	443	5	ISM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	228	1160	7	-805	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTCAGCTTACTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	59108019	59091037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_59091133_59094908_59094993_59097053_59097172_59098426_59098495_59107941
ENSMUSG00000020993.10_59094909_59108130_1	chr12	-	459	4	ISM	ENSMUSG00000020993.10	ENSMUST00000217863.2	797	5	108	4676	74	-4676	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTAATGGGATTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	59108130	59094908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_59094993_59097053_59097172_59098426_59098495_59107941
ENSMUSG00000020994.6_59113750_59117083_1	chr12	+	593	6	NNC	ENSMUSG00000020994.6	novel	660	6	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCAGGGTTTTCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	59113749	59117083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_59113897_59114564_59114637_59115070_59115140_59115511_59115585_59115901_59115978_59116927
ENSMUSG00000020994.6_59113750_59117083_2	chr12	+	598	6	FSM	ENSMUSG00000020994.6	ENST00000553331.5	660	6	62	0	62	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCAGGGTTTTCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	59113749	59117083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115901_59115978_59116927
ENSMUSG00000020994.6_59113750_59117083_3	chr12	+	590	6	NNC	ENSMUSG00000020994.6	novel	660	6	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCAGGGTTTTCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	59113749	59117083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115901_59115978_59116935
ENSMUSG00000020994.6_59113750_59118539_1	chr12	+	1160	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	80	2245	62	1456	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGAGAAGCAGCAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	59113749	59118539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ENSMUSG00000020994.6_59115714_59118842_1	chr12	+	1071	5	ISM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	2044	1942	2026	1759	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTCAGCCTCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	59115713	59118842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ENSMUSG00000020994.6_59116979_59119035_1	chr12	+	1068	3	ISM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	3309	1749	3291	-1749	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTAGAGTCTATAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	59116978	59119035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_59117084_59117164_59117304_59118211
ENSMUSG00000020994.6_59117254_59119237_1	chr12	+	1076	2	ISM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	3584	1547	3566	-1547	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCAGCAGCAGTAGTCGA	NA	NA	NA	NA	NA	NA	NA	NA	59117253	59119237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_59117304_59118211
ENSMUSG00000021000.18_59184483_59236738_1	chr12	+	2348	21	FSM	ENSMUSG00000021000.18	ENST00000556148.5	2344	21	-2	-2	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATGGGTAAATTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	59184482	59236738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_59184573_59191484_59191574_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ENSMUSG00000021000.18_59184483_59236962_1	chr12	+	2582	22	ISM	ENSMUSG00000021000.18	ENSMUST00000176322.8	2649	25	6230	-224	-2	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGTTTGGTATTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	59184482	59236962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_59184573_59191484_59191557_59193121_59193149_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ENSMUSG00000021007.15_98600485_98628317_1	chr12	+	864	6	ISM	ENSMUSG00000021007.15	ENSMUST00000048402.12	2052	12	6069	7757	6029	-7754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGATTCTGCAGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	98600484	98628317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98600579_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230
ENSMUSG00000021007.15_98624743_98635701_1	chr12	+	877	7	ISM	ENSMUSG00000021007.15	ENSMUST00000101146.4	1913	11	30287	370	30287	-370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGGAATGAAAACAATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	98624742	98635701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
ENSMUSG00000021007.15_98624856_98635806_1	chr12	+	869	7	ISM	ENSMUSG00000021007.15	ENSMUST00000101146.4	1913	11	30400	265	30400	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTCTGTTGTCTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	98624855	98635806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
ENSMUSG00000021010.10_53547907_54091340_1	chr12	+	648	6	ISM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	91	24657	91	-24517	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGAGTGTCGCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	53547906	54091340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_53548062_53687236_53687320_53878478_53878569_53993945_53994121_54050235_54050355_54091314
ENSMUSG00000021010.10_53547981_54091377_1	chr12	+	611	6	ISM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	165	24620	165	-24480	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAATCATGGGTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	53547980	54091377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_53548062_53687236_53687320_53878478_53878569_53993945_53994121_54050235_54050355_54091314
ENSMUSG00000021010.10_53548023_54091443_1	chr12	+	635	6	ISM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	207	24554	207	-24414	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACTGCCATATGTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	53548022	54091443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_53548062_53687236_53687320_53878478_53878569_53993945_53994121_54050235_54050355_54091314
ENSMUSG00000021010.10_53878476_54095655_1	chr12	+	688	5	ISM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	330660	20342	330660	-20202	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTACCCTTCTAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	53878475	54095655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_53878569_53993945_53994121_54050235_54050355_54091314_54091509_54095548
ENSMUSG00000021010.10_53993949_54108790_1	chr12	+	617	5	ISM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	446133	7207	446133	-7067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTACTACCGCTGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	53993948	54108790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_53994121_54050235_54050355_54091314_54091509_54095548_54095656_54108765
ENSMUSG00000021010.10_53994003_54108841_1	chr12	+	614	5	ISM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	446187	7156	446187	-7016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCCACCATAGCTATTA	NA	NA	NA	NA	NA	NA	NA	NA	53994002	54108841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_53994121_54050235_54050355_54091314_54091509_54095548_54095656_54108765
ENSMUSG00000021010.10_53994056_54108894_1	chr12	+	614	5	ISM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	446240	7103	446240	-6963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGAATTATCTTCTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	53994055	54108894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_53994121_54050235_54050355_54091314_54091509_54095548_54095656_54108765
ENSMUSG00000021010.10_54050233_54112698_1	chr12	+	696	5	ISM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	502417	3299	502417	-3159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTACTTCTCCATGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	54050232	54112698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_54050355_54091314_54091509_54095548_54095656_54108765_54108914_54112573
ENSMUSG00000021010.10_54091370_54114608_1	chr12	+	607	5	ISM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	543554	1389	543554	-1249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCATGCGACAACGACATGA	NA	NA	NA	NA	NA	NA	NA	NA	54091369	54114608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_54091509_54095548_54095656_54108765_54108914_54112573_54112699_54114520
ENSMUSG00000021010.10_54091429_54114670_1	chr12	+	610	5	ISM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	543613	1327	543613	-1187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAGCGACGACAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	54091428	54114670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_54091509_54095548_54095656_54108765_54108914_54112573_54112699_54114520
ENSMUSG00000021010.10_54091480_54114723_1	chr12	+	612	5	ISM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	543664	1274	543664	-1134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGATGGCTTCGGCGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	54091479	54114723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_54091509_54095548_54095656_54108765_54108914_54112573_54112699_54114520
ENSMUSG00000021010.10_54095640_54114840_1	chr12	+	609	4	ISM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	547824	1157	547824	-1017	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACAGCGCGAACGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	54095639	54114840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_54095656_54108765_54108914_54112573_54112699_54114520
ENSMUSG00000021010.10_54108831_54114953_1	chr12	+	641	3	ISM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	561015	1044	561015	-904	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCCCAGGCCTGGACG	NA	NA	NA	NA	NA	NA	NA	NA	54108830	54114953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_54108914_54112573_54112699_54114520
ENSMUSG00000021010.10_54112665_54115099_1	chr12	+	613	2	ISM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	564849	898	564849	-758	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGGAGATCTCCAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	54112664	54115099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_54112699_54114520
ENSMUSG00000021012.17_98713248_98753291_1	chr12	+	2400	15	FSM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	25	721	0	185	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATTTCTTTTTTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	98713247	98753291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUSG00000021012.17_98713266_98730200_1	chr12	+	1358	9	ISM	ENSMUSG00000021012.17	ENST00000555755.5	2507	17	-35	22873	18	-22873	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAGCAAAAGGAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	98713265	98730200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081
ENSMUSG00000021012.17_98713266_98753339_1	chr12	+	2430	15	FSM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	43	673	18	233	multi-exon	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGACTTTATTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	98713265	98753339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUSG00000021012.17_98713369_98753408_1	chr12	+	2396	15	FSM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	146	604	68	302	multi-exon	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGACATGGTCATAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	98713368	98753408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUSG00000021012.17_98719036_98745381_1	chr12	+	1291	9	ISM	ENSMUSG00000021012.17	ENST00000555755.5	2507	17	5735	7692	5735	-7692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCATGGTCCATGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	98719035	98745381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366
ENSMUSG00000021012.17_98719090_98745441_1	chr12	+	1297	9	ISM	ENSMUSG00000021012.17	ENST00000555755.5	2507	17	5789	7632	5789	-7632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGTAGTGACACCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	98719089	98745441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366
ENSMUSG00000021012.17_98719115_98753561_1	chr12	+	2379	13	ISM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	5892	451	5814	-445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCATATGTACAGAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	98719114	98753561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUSG00000021012.17_98719122_98745526_1	chr12	+	1350	9	ISM	ENSMUSG00000021012.17	ENST00000555755.5	2507	17	5821	7547	5821	-7547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGATGGTTTCTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	98719121	98745526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366
ENSMUSG00000021012.17_98723324_98753734_1	chr12	+	2418	11	ISM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	10101	278	10023	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAAATGACAGAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	98723323	98753734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUSG00000021012.17_98723446_98746524_1	chr12	+	1319	8	ISM	ENSMUSG00000021012.17	ENST00000555755.5	2507	17	10145	6549	10145	-6549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTTTTCCAACGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98723445	98746524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306
ENSMUSG00000021012.17_98723446_98753787_1	chr12	+	2349	11	ISM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	10223	225	10145	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAACTTGGCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	98723445	98753787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUSG00000021012.17_98724849_98749940_1	chr12	+	1323	8	ISM	ENSMUSG00000021012.17	ENST00000555755.5	2507	17	11548	3133	11548	-3133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCCATTTCACCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	98724848	98749940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746525_98749840
ENSMUSG00000021012.17_98725075_98754012_1	chr12	+	2252	10	ISM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	11852	0	11774	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	98725074	98754012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUSG00000021012.17_98725155_98751945_1	chr12	+	1316	11	ISM	ENSMUSG00000021012.17	ENST00000555755.5	2507	17	11854	1128	11854	-1128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCATTACTGTGCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	98725154	98751945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746525_98749840_98749962_98751174_98751312_98751576_98751666_98751893
ENSMUSG00000021012.17_98725971_98752906_1	chr12	+	1405	11	ISM	ENSMUSG00000021012.17	ENST00000555755.5	2507	17	12670	167	-11310	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGAACTTGTCACGTCT	NA	NA	NA	NA	NA	NA	NA	NA	98725970	98752906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746525_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUSG00000021012.17_98726102_98752906_1	chr12	+	1274	11	ISM	ENSMUSG00000021012.17	ENST00000555755.5	2507	17	12801	167	-11179	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGAACTTGTCACGTCT	NA	NA	NA	NA	NA	NA	NA	NA	98726101	98752906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746525_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUSG00000021012.17_98726633_98753084_1	chr12	+	1351	10	ISM	ENSMUSG00000021012.17	ENST00000555755.5	2507	17	13332	-11	-10648	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTGCGGCATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	98726632	98753084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746525_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUSG00000021012.17_98730080_98753084_1	chr12	+	1316	9	ISM	ENSMUSG00000021012.17	ENST00000555755.5	2507	17	16779	-11	-7201	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTGCGGCATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	98730079	98753084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98730238_98740503_98740579_98745366_98745527_98746306_98746525_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUSG00000021012.17_98740502_98751311_1	chr12	+	728	5	ISM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	27254	2701	3221	-1762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTAACTTTGTGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	98740501	98751311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174
ENSMUSG00000021012.17_98746381_98752906_1	chr12	+	686	6	ISM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	33133	1106	9100	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGAACTTGTCACGTCT	NA	NA	NA	NA	NA	NA	NA	NA	98746380	98752906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUSG00000021013.17_98886873_98942808_1	chr12	+	1373	12	ISM	ENSMUSG00000021013.17	ENSMUST00000085109.10	2272	14	40	6683	2	-1	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGAGAACCTCCACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	98886872	98942808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98887043_98908476_98908598_98909561_98909626_98909720_98909881_98910083_98910174_98912827_98912873_98923539_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685
ENSMUSG00000021013.17_98886873_98942809_1	chr12	+	1427	11	NNC	ENSMUSG00000021013.17	novel	1378	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGAACCTCCACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	98886872	98942809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_98887043_98908476_98908598_98909561_98909626_98909720_98909881_98910083_98910244_98923506_98923626_98927665_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685
ENSMUSG00000021013.17_98886873_98942809_3	chr12	+	1430	11	NNC	ENSMUSG00000021013.17	novel	1378	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGAACCTCCACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	98886872	98942809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_98887043_98908476_98908598_98909561_98909626_98909720_98909881_98910083_98910244_98923506_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942687
ENSMUSG00000021013.17_98886873_98942809_4	chr12	+	1427	11	NNC	ENSMUSG00000021013.17	novel	1378	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGAACCTCCACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	98886872	98942809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_98887043_98908476_98908598_98909561_98909621_98909720_98909881_98910083_98910244_98923506_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685
ENSMUSG00000021013.17_98886873_98942809_5	chr12	+	1430	11	NNC	ENSMUSG00000021013.17	novel	1378	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGAACCTCCACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	98886872	98942809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_98887043_98908476_98908598_98909561_98909626_98909720_98909881_98910083_98910244_98923508_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685
ENSMUSG00000021013.17_98886873_98942809_6	chr12	+	1432	11	FSM	ENSMUSG00000021013.17	ENST00000338104.10	1378	11	-54	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGAACCTCCACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	98886872	98942809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_98887043_98908476_98908598_98909561_98909626_98909720_98909881_98910083_98910244_98923506_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685
ENSMUSG00000021013.17_98886873_98942809_7	chr12	+	1430	11	NNC	ENSMUSG00000021013.17	novel	1378	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGAACCTCCACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	98886872	98942809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_98887043_98908476_98908598_98909561_98909626_98909720_98909881_98910083_98910244_98923506_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942237_98942411_98942685
ENSMUSG00000021013.17_98886873_98942809_8	chr12	+	1425	11	NNC	ENSMUSG00000021013.17	novel	1378	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGAACCTCCACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	98886872	98942809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_98887043_98908476_98908591_98909561_98909626_98909720_98909881_98910083_98910244_98923506_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685
ENSMUSG00000021013.17_98886873_98942809_9	chr12	+	1430	11	NNC	ENSMUSG00000021013.17	novel	1378	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGAACCTCCACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	98886872	98942809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_98887043_98908476_98908598_98909561_98909626_98909720_98909881_98910083_98910244_98923506_98923626_98927660_98927749_98930755_98930867_98940902_98941041_98942235_98942411_98942685
ENSMUSG00000021013.17_98908555_98948821_1	chr12	+	1314	13	ISM	ENSMUSG00000021013.17	ENSMUST00000079146.13	2270	15	21684	676	21628	-670	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGCTCTGATCAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	98908554	98948821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98908598_98909561_98909626_98909720_98909881_98910083_98910174_98912827_98912873_98923539_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685_98942809_98946060_98946145_98948716
ENSMUSG00000021013.17_98910099_98949073_1	chr12	+	1284	10	ISM	ENSMUSG00000021013.17	ENSMUST00000079146.13	2270	15	23228	424	23172	-418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTCATATATGTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	98910098	98949073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98910174_98912827_98912873_98923539_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685_98942809_98946060_98946145_98948716
ENSMUSG00000021013.17_98930832_98949491_1	chr12	+	1332	6	ISM	ENSMUSG00000021013.17	ENSMUST00000079146.13	2270	15	43961	6	43905	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACTTTTCACTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	98930831	98949491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_98930867_98940900_98941041_98942235_98942411_98942685_98942809_98946060_98946145_98948716
ENSMUSG00000021018.9_20536240_20541019_1	chr16	+	1043	4	FSM	ENSMUSG00000021018.9	ENST00000430783.5	1094	4	51	0	51	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCCATTGTCATTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	20536239	20541019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20540659
ENSMUSG00000021022.10_55327166_55331623_1	chr12	-	1547	3	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	18160	1390	18160	-1390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTACCCATCAGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	55331623	55327165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55328591_55329698_55329759_55331561
ENSMUSG00000021022.10_55327227_55331675_1	chr12	-	1538	3	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	18108	1451	18108	-1451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTTATAGCTCATATA	NA	NA	NA	NA	NA	NA	NA	NA	55331675	55327226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55328591_55329698_55329759_55331561
ENSMUSG00000021022.10_55327596_55336533_1	chr12	-	1551	7	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	13250	1820	13250	-1820	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGTCTAGGTCTATTA	NA	NA	NA	NA	NA	NA	NA	NA	55336533	55327595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444
ENSMUSG00000021022.10_55327760_55340632_1	chr12	-	1568	9	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	9151	1984	9151	-1984	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGATTCAGGTTCTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	55340632	55327759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566
ENSMUSG00000021022.10_55327902_55344675_1	chr12	-	1571	10	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	5108	2126	5108	-2126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAAGGTGAGTGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	55344675	55327901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562
ENSMUSG00000021022.10_55328024_55345300_1	chr12	-	1554	11	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	4483	2248	4483	-2248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGAGACATGGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	55345300	55328023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195
ENSMUSG00000021022.10_55328190_55349447_1	chr12	-	1585	13	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	336	2414	336	-2414	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTGTCTAACTCAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	55349447	55328189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378
ENSMUSG00000021022.10_55328431_55349783_1	chr12	-	1561	14	FSM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	0	2655	0	-2655	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTCTGCAGATCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	55349783	55328430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349699
ENSMUSG00000021024.15_55445560_55459150_1	chr12	+	729	5	ISM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	0	6089	0	-5945	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTAGCCGGAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	55445559	55459150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971
ENSMUSG00000021024.15_55445580_55459107_1	chr12	+	659	5	NNC	ENSMUSG00000021024.15	novel	1042	7	NA	NA	20	-5988	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAAGAAGAAATTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	55445579	55459107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_55445777_55454253_55454349_55454786_55454869_55456918_55457068_55458971
ENSMUSG00000021024.15_55445580_55459144_1	chr12	+	697	5	NNC	ENSMUSG00000021024.15	novel	1042	7	NA	NA	20	-5951	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAAGTAAGTTAGCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	55445579	55459144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_55445777_55454253_55454343_55454786_55454869_55456911_55457068_55458971
ENSMUSG00000021024.15_55445580_55461207_1	chr12	+	728	6	ISM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	20	4032	20	-3888	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTCTGTCGATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	55445579	55461207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55461188
ENSMUSG00000021024.15_55445700_55461228_1	chr12	+	622	6	NNC	ENSMUSG00000021024.15	novel	1042	7	NA	NA	140	-3867	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAACCTTCAGAAATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	55445699	55461228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_55445777_55454253_55454349_55454786_55454869_55456918_55457068_55458971_55459151_55461188
ENSMUSG00000021024.15_55445752_55465095_1	chr12	+	706	7	FSM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	192	144	192	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGATCCTTGATGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	55445751	55465095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55461188_55461284_55465021
ENSMUSG00000021024.15_55454787_55465239_1	chr12	+	730	5	ISM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	9227	0	9227	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGGTGCATCCTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	55454786	55465239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55454869_55456911_55457068_55458971_55459151_55461188_55461284_55465021
ENSMUSG00000021024.15_55456910_55465239_1	chr12	+	644	4	NNC	ENSMUSG00000021024.15	novel	1042	7	NA	NA	11350	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGGTGCATCCTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	55456909	55465239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_55457068_55458971_55459145_55461188_55461284_55465021
ENSMUSG00000021025.9_55536195_55537623_1	chr12	-	889	3	ISM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	1809	0	1691	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCCCGCTCGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	55537623	55536194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55536755_55537190_55537452_55537555
ENSMUSG00000021025.9_55536641_55539108_1	chr12	-	808	6	FSM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	324	446	206	-417	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	55539108	55536640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084
ENSMUSG00000021025.9_55536691_55538117_1	chr12	-	498	4	ISM	ENSMUSG00000021025.9	ENST00000557140.5	1302	6	1197	467	1197	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTGGACTTGTATATT	NA	NA	NA	NA	NA	NA	NA	NA	55538117	55536690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55536755_55537190_55537323_55537555_55537645_55537904
ENSMUSG00000021025.9_55536699_55539152_1	chr12	-	794	6	FSM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	280	504	162	-475	multi-exon	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAAAAAGAATGTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	55539152	55536698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084
ENSMUSG00000021025.9_55536738_55539217_1	chr12	-	820	6	FSM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	215	543	97	-514	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGGAGGCCAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	55539217	55536737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084
ENSMUSG00000021025.9_55537192_55539272_1	chr12	-	857	5	ISM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	160	997	42	-968	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGTGTTCCTCCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	55539272	55537191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084
ENSMUSG00000021025.9_55537294_55539162_1	chr12	-	516	5	ISM	ENSMUSG00000021025.9	ENST00000557140.5	1302	6	152	1070	152	-1070	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCAGCAGCTGGGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	55539162	55537293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55537323_55537555_55537645_55537904_55538116_55538454_55538564_55539084
ENSMUSG00000021027.18_55659433_55723814_1	chr12	-	1376	7	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	143738	0	143738	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCTGACGCAGGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	55723814	55659432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188
ENSMUSG00000021027.18_55689108_55724050_1	chr12	-	1375	5	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	143502	29675	143502	-29675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGTTCTTAGCTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	55724050	55689107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188
ENSMUSG00000021027.18_55705895_55730836_1	chr12	-	1297	5	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	136716	46462	136716	-46462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATATTTCATGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	55730836	55705894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691
ENSMUSG00000021027.18_55712335_55731406_1	chr12	-	1380	5	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	136146	52902	136146	-52902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATACCAGCCATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	55731406	55712334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271
ENSMUSG00000021027.18_55720238_55736612_1	chr12	-	1322	5	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	130940	60805	130940	-60805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGTTGGGAAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	55736612	55720237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543
ENSMUSG00000021027.18_55723275_55741953_1	chr12	-	1297	6	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	125599	63842	125599	-63842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCAACACCTCAGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	55741953	55723274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931
ENSMUSG00000021027.18_55723453_55745598_1	chr12	-	1317	8	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	121954	64020	121954	-64020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGAGTGTTTACAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	55745598	55723452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546
ENSMUSG00000021027.18_55723579_55749264_1	chr12	-	1310	9	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	118288	64146	118288	-64146	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCGCAGTAAAAGATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	55749264	55723578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219
ENSMUSG00000021027.18_55723646_55749308_1	chr12	-	1287	9	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	118244	64213	118244	-64213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTTCAATGTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	55749308	55723645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219
ENSMUSG00000021027.18_55723995_55756358_1	chr12	-	1293	12	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	111194	64562	111194	-64562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGGTGAATCACTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	55756358	55723994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298
ENSMUSG00000021027.18_55724032_55756428_1	chr12	-	1326	12	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	111124	64599	111124	-64599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATTAATCTCTATAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	55756428	55724031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298
ENSMUSG00000021027.18_55730834_55759482_1	chr12	-	1293	12	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	108070	71401	108070	-71401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGTACTTTCCAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	55759482	55730833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418
ENSMUSG00000021027.18_55731370_55763791_1	chr12	-	1287	12	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	103761	71937	103761	-71937	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGCCTTACCTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	55763791	55731369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746
ENSMUSG00000021027.18_55736544_55763923_1	chr12	-	1382	11	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	103629	77111	103629	-77111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATTTAAAATTTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	55763923	55736543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746
ENSMUSG00000021027.18_55740174_55764911_1	chr12	-	1313	11	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	102641	80741	102641	-80741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCAGCCGCAGTCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	55764911	55740173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877
ENSMUSG00000021027.18_55742007_55765068_1	chr12	-	1318	10	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	102484	82574	102484	-82574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAGAATTAGTCCACGA	NA	NA	NA	NA	NA	NA	NA	NA	55765068	55742006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877
ENSMUSG00000021027.18_55745546_55766493_1	chr12	-	1377	9	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	101059	86113	101059	-86113	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAATAAGATAAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	55766493	55745545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368
ENSMUSG00000021027.18_55749219_55769578_1	chr12	-	1271	9	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	97974	89786	97974	-89786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTTTATTTCTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	55769578	55749218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558
ENSMUSG00000021027.18_55749268_55769641_1	chr12	-	1285	9	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	97911	89835	97911	-89835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTATTATAGCAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	55769641	55749267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558
ENSMUSG00000021027.18_55749314_55769698_1	chr12	-	1296	9	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	97854	89881	97854	-89881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTTTTTCACTCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	55769698	55749313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558
ENSMUSG00000021027.18_55756340_55786283_1	chr12	-	1322	8	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	81269	96907	81269	-96907	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATTACCTCTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	55786283	55756339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116
ENSMUSG00000021027.18_55763745_55794049_1	chr12	-	1368	8	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	73503	104312	73503	-104312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAACTCAAGGGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	55794049	55763744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900
ENSMUSG00000021027.18_55763886_55804770_1	chr12	-	1287	9	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	62782	104453	62782	-104453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTGGATTTAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	55804770	55763885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710
ENSMUSG00000021027.18_55764949_55809366_1	chr12	-	1295	9	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	58186	105516	58186	-105516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCTCATGAGCTCAGATA	NA	NA	NA	NA	NA	NA	NA	NA	55809366	55764948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324
ENSMUSG00000021027.18_55765006_55809413_1	chr12	-	1285	9	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	58139	105573	58139	-105573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATGACCCTGGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	55809413	55765005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324
ENSMUSG00000021027.18_55765061_55809472_1	chr12	-	1289	9	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	58080	105628	58080	-105628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAATCCCGAAAGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	55809472	55765060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324
ENSMUSG00000021027.18_55766438_55817452_1	chr12	-	1285	9	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	50100	107005	50100	-107005	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCGCCAATGTTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	55817452	55766437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403
ENSMUSG00000021027.18_55769620_55817576_1	chr12	-	1292	8	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	49976	110187	49976	-110187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTCGAAGTAGCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	55817576	55769619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403
ENSMUSG00000021027.18_55785030_55822899_1	chr12	-	1314	8	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	44653	125597	44653	-125597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCCAGGAGTATAGTACG	NA	NA	NA	NA	NA	NA	NA	NA	55822899	55785029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803
ENSMUSG00000021027.18_55785095_55822937_1	chr12	-	1287	8	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	44615	125662	44615	-125662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGCCTGGCCAGGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	55822937	55785094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803
ENSMUSG00000021027.18_55786183_55824127_1	chr12	-	1284	8	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	43425	126750	43425	-126750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCTCAGTGATTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	55824127	55786182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076
ENSMUSG00000021027.18_55786305_55829618_1	chr12	-	1302	9	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	37934	126872	37934	-126872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTTTGGGATGACTTAC	NA	NA	NA	NA	NA	NA	NA	NA	55829618	55786304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566
ENSMUSG00000021027.18_55788287_55833000_1	chr12	-	1294	9	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	34552	128854	34552	-128854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGCAGTTCCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	55833000	55788286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954
ENSMUSG00000021027.18_55793895_55833132_1	chr12	-	1370	8	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	34420	134462	34420	-134462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATACCTTTTGGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	55833132	55793894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954
ENSMUSG00000021027.18_55804708_55841829_1	chr12	-	1370	10	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	25723	145275	25723	-145275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTTTCTACTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	55841829	55804707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779
ENSMUSG00000021027.18_55809468_55866619_1	chr12	-	1284	11	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	933	150035	933	-150035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAAGAATGGATTCAACAA	NA	NA	NA	NA	NA	NA	NA	NA	55866619	55809467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55866535
ENSMUSG00000021027.18_55817403_55867552_1	chr12	-	1371	11	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	0	157970	0	-157970	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATACTGTCAACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	55867552	55817402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55866535_55866655_55867446
ENSMUSG00000021028.9_56375088_56384616_1	chr12	-	778	4	ISM	ENSMUSG00000021028.9	ENST00000621657.4	1172	7	4526	-42	4526	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGTCTTTTTTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	56384616	56375087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_56375547_56382582_56382681_56384087_56384241_56384548
ENSMUSG00000021028.9_56375338_56389136_1	chr12	-	937	7	FSM	ENSMUSG00000021028.9	ENST00000359527.11	1151	7	6	208	6	-208	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACTTAGTCCCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	56389136	56375337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_56375585_56377013_56377053_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020
ENSMUSG00000021028.9_56375411_56389038_1	chr12	-	787	7	FSM	ENSMUSG00000021028.9	ENST00000621657.4	1172	7	104	281	104	-281	multi-exon	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTTGTCTGACAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	56389038	56375410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_56375547_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020
ENSMUSG00000021028.9_56375416_56387250_1	chr12	-	703	7	ISM	ENSMUSG00000021028.9	ENSMUST00000021416.9	1512	9	5429	328	1892	-286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACATAAACTTGTCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	56387250	56375415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169
ENSMUSG00000021028.9_56375486_56389074_1	chr12	-	748	7	FSM	ENSMUSG00000021028.9	ENST00000621657.4	1172	7	68	356	68	-356	multi-exon	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGACCACTCTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	56389074	56375485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_56375547_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020
ENSMUSG00000021028.9_56375526_56387342_1	chr12	-	685	7	ISM	ENSMUSG00000021028.9	ENSMUST00000021416.9	1512	9	5337	438	1800	-396	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAAGTCAAGAGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	56387342	56375525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169
ENSMUSG00000021028.9_56375531_56389136_1	chr12	-	765	7	FSM	ENSMUSG00000021028.9	ENST00000621657.4	1172	7	6	401	6	-401	multi-exon	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCTCAGAAAGTCAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	56389136	56375530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_56375547_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020
ENSMUSG00000021033.12_87194492_87210639_1	chr12	+	798	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	0	858	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCCAGATGCTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	87194491	87210639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUSG00000021033.12_87204665_87208869_1	chr12	+	383	5	ISM	ENSMUSG00000021033.12	ENST00000556627.5	585	7	0	1763	0	-1763	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCCCCAGCCCTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	87204664	87208869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_87204719_87205851_87205920_87206823_87206950_87208248_87208328_87208813
ENSMUSG00000021033.12_87204665_87210639_1	chr12	+	547	7	FSM	ENSMUSG00000021033.12	ENST00000349555.7	540	7	0	-7	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCCAGATGCTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	87204664	87210639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_87204719_87205851_87205920_87206413_87206495_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUSG00000021033.12_87205851_87209813_1	chr12	+	379	5	ISM	ENSMUSG00000021033.12	ENST00000556627.5	585	7	1186	819	1186	-819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGTTCTGCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	87205850	87209813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_87205920_87206823_87206950_87208248_87208328_87208813_87208867_87209761
ENSMUSG00000021033.12_87205857_87210787_1	chr12	+	762	7	ISM	ENSMUSG00000021033.12	ENSMUST00000222222.2	724	9	1475	-148	1192	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCTGGAGAGGTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	87205856	87210787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUSG00000021033.12_87206410_87210934_1	chr12	+	850	6	ISM	ENSMUSG00000021033.12	ENSMUST00000222222.2	724	9	2028	-295	1745	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCCCTATATGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	87206409	87210934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUSG00000021033.12_87208246_87211098_1	chr12	+	806	4	ISM	ENSMUSG00000021033.12	ENST00000349555.7	540	7	3581	-466	3581	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTTCGATATATCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	87208245	87211098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUSG00000021036.11_87356630_87360847_1	chr12	-	318	3	ISM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	74282	4798	74282	-4798	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCCTTTCTGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	87360847	87356629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87356795_87359471_87359602_87360824
ENSMUSG00000021036.11_87360893_87388412_1	chr12	-	297	3	ISM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	46717	9061	46717	-9061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATCATCTATGGCAATGA	NA	NA	NA	NA	NA	NA	NA	NA	87388412	87360892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87360961_87382805_87382933_87388310
ENSMUSG00000021036.11_87382873_87389438_1	chr12	-	301	3	ISM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	45691	31041	45691	-31041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCCTGTGATGGAACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	87389438	87382872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87382933_87388310_87388531_87389417
ENSMUSG00000021036.11_87402363_87415775_1	chr12	-	312	3	ISM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	19354	50531	19354	-50531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCTGCTGAAGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	87415775	87402362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87402449_87403321_87403477_87415704
ENSMUSG00000021037.8_87313484_87320272_1	chr12	+	976	8	ISM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	12	481	12	-481	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAACGCTTGCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	87313483	87320272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220
ENSMUSG00000021037.8_87313632_87320572_1	chr12	+	1031	9	NNC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	160	-181	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCAGCCCTCTCGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	87313631	87320572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_87313696_87314933_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ENSMUSG00000021037.8_87313632_87320572_2	chr12	+	1030	9	NNC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	160	-181	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCAGCCCTCTCGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	87313631	87320572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319351_87319475_87319896_87319999_87320220_87320273_87320364
ENSMUSG00000021037.8_87313632_87320572_3	chr12	+	1036	9	FSM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	160	181	160	-181	multi-exon	FALSE	canonical	NA	NA	NA	NA	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCAGCCCTCTCGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	87313631	87320572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ENSMUSG00000021037.8_87314996_87320753_1	chr12	+	1086	8	ISM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	1524	0	1524	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTCTTACAATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	87314995	87320753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ENSMUSG00000021037.8_87316644_87320754_1	chr12	+	962	7	NNC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	3172	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTCTTACAATCTATG	NA	NA	NA	NA	NA	NA	NA	NA	87316643	87320754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_87316732_87317110_87317229_87318112_87318202_87319351_87319475_87319896_87319999_87320220_87320273_87320364
ENSMUSG00000021037.8_87316644_87320754_2	chr12	+	968	7	ISM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	3172	-1	3172	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTCTTACAATCTATG	NA	NA	NA	NA	NA	NA	NA	NA	87316643	87320754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ENSMUSG00000021038.18_87286508_87293037_1	chr12	-	652	7	ISM	ENSMUSG00000021038.18	ENST00000327028.8	1417	18	17734	0	17734	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGCATTCTACACGTGA	NA	NA	NA	NA	NA	NA	NA	NA	87293037	87286507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902
ENSMUSG00000021038.18_87286508_87312983_1	chr12	-	1962	20	FSM	ENSMUSG00000021038.18	ENST00000553888.5	1993	20	31	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGCATTCTACACGTGA	NA	NA	NA	NA	NA	NA	NA	NA	87312983	87286507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312579
ENSMUSG00000021038.18_87288011_87293668_1	chr12	-	625	7	ISM	ENSMUSG00000021038.18	ENST00000327028.8	1417	18	17103	1503	17103	-1503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCTACCCTCCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	87293668	87288010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592
ENSMUSG00000021038.18_87288764_87298534_1	chr12	-	614	9	ISM	ENSMUSG00000021038.18	ENST00000327028.8	1417	18	12237	2256	12237	-2256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAAGTTGAACTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	87298534	87288763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489
ENSMUSG00000021038.18_87289260_87298592_1	chr12	-	635	8	ISM	ENSMUSG00000021038.18	ENST00000327028.8	1417	18	12179	2752	12179	-2752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGGCTTTGAAAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	87298592	87289259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489
ENSMUSG00000021038.18_87289260_87298594_1	chr12	-	627	7	NNC	ENSMUSG00000021038.18	novel	1417	18	NA	NA	12177	-2752	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGGCTTTGAAAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	87298594	87289259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87298471
ENSMUSG00000021038.18_87291229_87300032_1	chr12	-	675	9	ISM	ENSMUSG00000021038.18	ENST00000327028.8	1417	18	10739	4721	10739	-4721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTGCCCTGCCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	87300032	87291228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939
ENSMUSG00000021038.18_87292902_87303323_1	chr12	-	666	9	ISM	ENSMUSG00000021038.18	ENST00000327028.8	1417	18	7448	6394	7448	-6394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGGGGGAGTAAGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	87303323	87292901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258
ENSMUSG00000021038.18_87292902_87303324_1	chr12	-	657	8	NNC	ENSMUSG00000021038.18	novel	1417	18	NA	NA	7447	-6394	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGGGGGAGTAAGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	87303324	87292901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_87293038_87293592_87293669_87296161_87296236_87298471_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258
ENSMUSG00000021038.18_87293592_87307512_1	chr12	-	677	10	ISM	ENSMUSG00000021038.18	ENST00000327028.8	1417	18	3259	7084	3259	-7084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACTCCCTGTCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	87307512	87293591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87307405
ENSMUSG00000021038.18_87293592_87307512_2	chr12	-	667	9	NNC	ENSMUSG00000021038.18	novel	1417	18	NA	NA	3259	-7084	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACTCCCTGTCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	87307512	87293591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_87293669_87296161_87296236_87298471_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87307405
ENSMUSG00000021038.18_87305912_87312838_1	chr12	-	352	4	ISM	ENSMUSG00000021038.18	ENST00000556412.4	1782	20	152	19404	145	-19404	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTACACACAGCTACCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	87312838	87305911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87305996_87307405_87307509_87310678_87310772_87312766
ENSMUSG00000021039.10_87496680_87503738_1	chr12	-	1445	6	ISM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	15306	0	15306	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTTTATTTAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	87503738	87496679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621
ENSMUSG00000021039.10_87496875_87506265_1	chr12	-	1391	8	ISM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	12779	195	12779	-195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACACTAATCCAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	87506265	87496874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190
ENSMUSG00000021039.10_87497039_87508455_1	chr12	-	1348	10	ISM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	10589	359	10589	-359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATAGATCCCAGCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	87508455	87497038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434
ENSMUSG00000021039.10_87497192_87508692_1	chr12	-	1342	11	ISM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	10352	512	10352	-512	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCCAGGGAATAGGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	87508692	87497191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631
ENSMUSG00000021039.10_87497436_87515424_1	chr12	-	1340	13	ISM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	3620	756	3620	-756	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGACCAGTGCAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	87515424	87497435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379
ENSMUSG00000021039.10_87497576_87515533_1	chr12	-	1398	12	ISM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	3511	896	3511	-896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACCGTGTAGACAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	87515533	87497575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379
ENSMUSG00000021040.16_87490666_87496954_1	chr12	+	679	4	FSM	ENSMUSG00000021040.16	ENSMUST00000161023.8	2701	4	0	2022	0	264	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTCCATATAAAAAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	87490665	87496954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_87490797_87494333_87494393_87496062_87496171_87496573
ENSMUSG00000021040.16_87490716_87497024_1	chr12	+	699	4	FSM	ENSMUSG00000021040.16	ENSMUST00000161023.8	2701	4	50	1952	34	334	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGATCTATCATCGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	87490715	87497024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_87490797_87494333_87494393_87496062_87496171_87496573
ENSMUSG00000021040.16_87490716_87497085_1	chr12	+	760	4	FSM	ENSMUSG00000021040.16	ENSMUST00000161023.8	2701	4	50	1891	34	395	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCTGGTCATCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	87490715	87497085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_87490797_87494333_87494393_87496062_87496171_87496573
ENSMUSG00000021040.16_87496152_87497252_1	chr12	+	698	2	ISM	ENSMUSG00000021040.16	ENSMUST00000161023.8	2701	4	5486	1724	5470	562	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCATATGTCAGATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	87496151	87497252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_87496171_87496573
ENSMUSG00000021044.16_88327418_88428258_1	chr12	+	2021	11	FSM	ENSMUSG00000021044.16	ENSMUST00000222695.2	2253	11	0	232	0	-230	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGGGCGTGTTTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	88327417	88428258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUSG00000021044.16_88327418_88428322_1	chr12	+	2085	11	FSM	ENSMUSG00000021044.16	ENSMUST00000222695.2	2253	11	0	168	0	-166	multi-exon	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTGCTGTATCACTC	NA	NA	NA	NA	NA	NA	NA	NA	88327417	88428322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUSG00000021044.16_88327532_88428380_1	chr12	+	2029	11	FSM	ENSMUSG00000021044.16	ENSMUST00000222695.2	2253	11	114	110	114	-108	multi-exon	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGAACGATGCAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	88327531	88428380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUSG00000021044.16_88327659_88428108_1	chr12	+	1819	11	FSM	ENSMUSG00000021044.16	ENSMUST00000166940.3	2199	11	0	380	0	-380	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTTGGGGTGGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	88327658	88428108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_88327743_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUSG00000021044.16_88335107_88423705_1	chr12	+	1012	7	FSM	ENSMUSG00000021044.16	ENST00000341211.5	1012	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAACCCTTTCCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	88335106	88423705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_88335251_88338464_88338549_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506
ENSMUSG00000021044.16_88338464_88428491_1	chr12	+	1973	9	ISM	ENSMUSG00000021044.16	ENSMUST00000166940.3	2199	11	10805	-3	3357	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTGTTCCTTCTCAATC	NA	NA	NA	NA	NA	NA	NA	NA	88338463	88428491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUSG00000021048.8_76302187_76361282_1	chr12	+	2656	25	ISM	ENSMUSG00000021048.8	ENSMUST00000021443.7	3241	28	115	5295	0	-5294	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGTTTACACCCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	76302186	76361282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174
ENSMUSG00000021048.8_76317215_76361875_1	chr12	+	2654	25	ISM	ENSMUSG00000021048.8	ENSMUST00000021443.7	3241	28	15143	4702	15028	-4701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGAAGGCTGTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	76317214	76361875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722
ENSMUSG00000021048.8_76326929_76364474_1	chr12	+	2628	24	ISM	ENSMUSG00000021048.8	ENSMUST00000220046.2	3040	27	24742	2102	24742	-2102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGCTACTGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	76326928	76364474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380
ENSMUSG00000021048.8_76327231_76366405_1	chr12	+	2546	24	ISM	ENSMUSG00000021048.8	ENSMUST00000220046.2	3040	27	25044	171	25044	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAGAAGTGTGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	76327230	76366405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ENSMUSG00000021048.8_76327275_76366576_1	chr12	+	2673	24	ISM	ENSMUSG00000021048.8	ENSMUST00000220046.2	3040	27	25088	0	25088	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGGTGTTGAAACATAA	NA	NA	NA	NA	NA	NA	NA	NA	76327274	76366576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ENSMUSG00000021051.11_75497995_75513445_1	chr12	-	2987	5	ISM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	129529	340	129529	-340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATATTGTAGTTAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	75513445	75497994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401
ENSMUSG00000021051.11_75498638_75562468_1	chr12	-	2993	12	ISM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	80506	983	80506	635	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCTTAAAGAGCGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	75562468	75498637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375
ENSMUSG00000021051.11_75499273_75642732_1	chr12	-	2950	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	242	1618	242	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATATCAAAGGTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	75642732	75499272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
ENSMUSG00000021065.17_77285839_77459515_1	chr12	+	1142	7	ISM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	33	63128	0	-63128	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTGTGTAACATCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	77285838	77459515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_77286028_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485
ENSMUSG00000021065.17_77285946_77459556_1	chr12	+	1076	7	ISM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	140	63087	107	-63087	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCATCACGTGGTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	77285945	77459556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_77286028_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485
ENSMUSG00000021065.17_77285994_77459615_1	chr12	+	1087	7	ISM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	188	63028	155	-63028	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATCTCAGAATTGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	77285993	77459615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_77286028_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485
ENSMUSG00000021065.17_77324134_77459725_1	chr12	+	1164	6	ISM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	38328	62918	38295	-62918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGCTTGTGCAACATAA	NA	NA	NA	NA	NA	NA	NA	NA	77324133	77459725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485
ENSMUSG00000021065.17_77378759_77495367_1	chr12	+	1098	6	ISM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	92953	27276	92920	-27276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGACCCTGCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	77378758	77495367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246
ENSMUSG00000021065.17_77378816_77495412_1	chr12	+	1086	6	ISM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	93010	27231	92977	-27231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATTCGTCCACAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	77378815	77495412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246
ENSMUSG00000021065.17_77378870_77522188_1	chr12	+	1857	9	ISM	ENSMUSG00000021065.17	ENSMUST00000062804.8	3358	12	93031	924	93031	-455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1015	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACCAAGAGCAAGCGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	77378869	77522188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ENSMUSG00000021065.17_77378960_77496924_1	chr12	+	1074	7	ISM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	93154	25719	93121	-25719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGAGGAGTACATGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	77378959	77496924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873
ENSMUSG00000021065.17_77379060_77497031_1	chr12	+	1081	7	ISM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	93254	25612	93221	-25612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGGAGGCAAAGACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	77379059	77497031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873
ENSMUSG00000021065.17_77411742_77510986_1	chr12	+	1163	7	ISM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	125936	11657	125903	-11657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGTAGTATGTTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	77411741	77510986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510880
ENSMUSG00000021065.17_77411825_77521830_1	chr12	+	1136	8	ISM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	126019	813	125986	-813	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCTTTGGATGACATC	NA	NA	NA	NA	NA	NA	NA	NA	77411824	77521830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510880_77510985_77521772
ENSMUSG00000021065.17_77459483_77522103_1	chr12	+	1100	5	ISM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	173677	540	173644	-540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGATTAACAACAGAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	77459482	77522103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_77459724_77495246_77495494_77496873_77497051_77510880_77510985_77521772
ENSMUSG00000021065.17_77495367_77522442_1	chr12	+	1078	4	ISM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	209561	201	209528	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACCGAGAAGATGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	77495366	77522442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_77495494_77496873_77497051_77510880_77510985_77521772
ENSMUSG00000021065.17_77496873_77522656_1	chr12	+	1166	3	ISM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	211067	-13	211034	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCCATTAGGAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	77496872	77522656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_77497051_77510880_77510985_77521772
ENSMUSG00000021066.10_69954610_70010803_1	chr12	+	2485	13	NNC	ENSMUSG00000021066.10	novel	2492	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1076	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGCTCACTGGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	69954609	70010803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_69954767_69972715_69972964_69978311_69978447_69978990_69979096_69981643_69981695_69983848_69983906_69992986_69993080_69994227_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006263_70010001
ENSMUSG00000021066.10_69954610_70010803_2	chr12	+	2485	13	NNC	ENSMUSG00000021066.10	novel	2492	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1075	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGCTCACTGGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	69954609	70010803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_69954767_69972715_69972964_69978311_69978447_69978997_69979096_69981643_69981695_69983848_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006263_70010001
ENSMUSG00000021066.10_69954610_70010803_3	chr12	+	2492	13	FSM	ENSMUSG00000021066.10	ENST00000358385.12	2492	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGCTCACTGGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	69954609	70010803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_69954767_69972715_69972964_69978311_69978447_69978990_69979096_69981643_69981695_69983848_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006263_70010001
ENSMUSG00000021066.10_69954610_70010803_4	chr12	+	2482	13	NNC	ENSMUSG00000021066.10	novel	2492	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGCTCACTGGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	69954609	70010803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_69954767_69972715_69972954_69978311_69978447_69978990_69979096_69981643_69981695_69983848_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006263_70010001
ENSMUSG00000021066.10_69954610_70010803_5	chr12	+	2485	13	NNC	ENSMUSG00000021066.10	novel	2492	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGCTCACTGGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	69954609	70010803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_69954767_69972715_69972964_69978311_69978447_69978990_69979096_69981643_69981695_69983848_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002096_70002162_70005814_70006263_70010001
ENSMUSG00000021066.10_69954610_70010803_6	chr12	+	2486	13	NNC	ENSMUSG00000021066.10	novel	2492	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGCTCACTGGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	69954609	70010803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_69954767_69972715_69972964_69978311_69978447_69978990_69979096_69981643_69981695_69983848_69983906_69992986_69993080_69994220_69994360_70000219_70000342_70001229_70001287_70002089_70002162_70005814_70006263_70010001
ENSMUSG00000021066.10_69954610_70010803_7	chr12	+	2486	13	NNC	ENSMUSG00000021066.10	novel	2492	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGCTCACTGGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	69954609	70010803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_69954761_69972715_69972964_69978311_69978447_69978990_69979096_69981643_69981695_69983848_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006263_70010001
ENSMUSG00000021069.18_70237593_70243801_1	chr12	-	805	5	ISM	ENSMUSG00000021069.18	ENST00000544180.6	2625	19	30572	-6	30572	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAATAGCCTGCTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	70243801	70237592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70237931_70240512_70240580_70241006_70241142_70242277_70242486_70243744
ENSMUSG00000021069.18_70237593_70243859_1	chr12	-	863	5	ISM	ENSMUSG00000021069.18	ENST00000544180.6	2625	19	30514	-6	30514	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAATAGCCTGCTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	70243859	70237592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70237931_70240512_70240580_70241006_70241142_70242277_70242486_70243744
ENSMUSG00000021069.18_70237825_70244229_1	chr12	-	775	7	ISM	ENSMUSG00000021069.18	ENST00000544180.6	2625	19	30144	226	30144	-226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTCGGATCTGAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	70244229	70237824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70237931_70240512_70240580_70241006_70241142_70242277_70242486_70243744_70243887_70243991_70244051_70244171
ENSMUSG00000021069.18_70240542_70244497_1	chr12	-	794	7	ISM	ENSMUSG00000021069.18	ENST00000544180.6	2625	19	29876	2943	29876	-2943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAAGAAAAAGTCAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	70244497	70240541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70240580_70241006_70241142_70242277_70242486_70243744_70243887_70243991_70244051_70244171_70244320_70244433
ENSMUSG00000021069.18_70241017_70245220_1	chr12	-	801	7	ISM	ENSMUSG00000021069.18	ENST00000544180.6	2625	19	29153	3418	29153	-3418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGACAGGTGAGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	70245220	70241016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70241142_70242277_70242486_70243744_70243887_70243991_70244051_70244171_70244320_70244433_70244536_70245203
ENSMUSG00000021069.18_70241081_70245273_1	chr12	-	790	7	ISM	ENSMUSG00000021069.18	ENST00000544180.6	2625	19	29100	3482	29100	-3482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAATGGCTTCTTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	70245273	70241080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70241142_70242277_70242486_70243744_70243887_70243991_70244051_70244171_70244320_70244433_70244536_70245203
ENSMUSG00000021069.18_70242314_70246456_1	chr12	-	779	7	ISM	ENSMUSG00000021069.18	ENST00000544180.6	2625	19	27917	4715	27917	-4715	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTAGATGATGTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	70246456	70242313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70242486_70243744_70243887_70243991_70244051_70244171_70244320_70244433_70244536_70245203_70245319_70246415
ENSMUSG00000021069.18_70242436_70246579_1	chr12	-	780	7	ISM	ENSMUSG00000021069.18	ENST00000544180.6	2625	19	27794	4837	27794	-4837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCCGGGACAGGCAACAT	NA	NA	NA	NA	NA	NA	NA	NA	70246579	70242435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70242486_70243744_70243887_70243991_70244051_70244171_70244320_70244433_70244536_70245203_70245319_70246415
ENSMUSG00000021069.18_70244005_70248106_1	chr12	-	786	7	ISM	ENSMUSG00000021069.18	ENST00000544180.6	2625	19	26267	6406	26267	-6406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGTGGCAAAGTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	70248106	70244004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70244051_70244171_70244320_70244433_70244536_70245203_70245319_70246415_70246580_70246905_70247053_70248042
ENSMUSG00000021069.18_70244173_70248685_1	chr12	-	835	7	ISM	ENSMUSG00000021069.18	ENSMUST00000071250.13	2825	20	25772	6588	25688	-6574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAGTTTCTCCAGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	70248685	70244172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70244320_70244433_70244536_70245203_70245319_70246415_70246580_70246905_70247053_70248042_70248136_70248618
ENSMUSG00000021069.18_70244173_70248735_1	chr12	-	885	7	ISM	ENSMUSG00000021069.18	ENSMUST00000071250.13	2825	20	25722	6588	25638	-6574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAGTTTCTCCAGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	70248735	70244172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70244320_70244433_70244536_70245203_70245319_70246415_70246580_70246905_70247053_70248042_70248136_70248618
ENSMUSG00000021069.18_70244475_70253190_1	chr12	-	779	7	ISM	ENSMUSG00000021069.18	ENSMUST00000071250.13	2825	20	21267	6890	21183	-6876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGACATCTTCCTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	70253190	70244474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70244536_70245203_70245319_70246415_70246580_70246905_70247053_70248042_70248136_70248618_70248763_70253135
ENSMUSG00000021069.18_70245204_70254556_1	chr12	-	858	7	ISM	ENSMUSG00000021069.18	ENSMUST00000071250.13	2825	20	19901	7619	19817	-7605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAAGGAGGTGCTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	70254556	70245203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70245319_70246415_70246580_70246905_70247053_70248042_70248136_70248618_70248763_70253135_70253219_70254444
ENSMUSG00000021069.18_70246527_70263387_1	chr12	-	815	8	ISM	ENSMUSG00000021069.18	ENSMUST00000071250.13	2825	20	11070	8942	10986	-8928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAGGAGGAAGGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	70263387	70246526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70246580_70246905_70247053_70248042_70248136_70248618_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336
ENSMUSG00000021069.18_70246998_70266425_1	chr12	-	786	8	ISM	ENSMUSG00000021069.18	ENSMUST00000071250.13	2825	20	8032	9413	7948	-9399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCCTGGAGCGCTGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	70266425	70246997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70247053_70248042_70248136_70248618_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336_70263441_70266362
ENSMUSG00000021069.18_70248068_70274191_1	chr12	-	799	8	NIC	ENSMUSG00000021069.18	novel	2825	20	NA	NA	182	-10469	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAAACTGCCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	70274191	70248067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr12_-_70248136_70248618_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336_70263441_70266362_70266442_70274114
ENSMUSG00000021069.18_70248681_70274386_1	chr12	-	864	7	ISM	ENSMUSG00000021069.18	ENST00000544180.6	2625	19	-13	11082	-13	-11082	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTCCAAGTTCGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	70274386	70248680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336_70263441_70266362_70266442_70274114
ENSMUSG00000021069.18_70248730_70274386_1	chr12	-	815	7	ISM	ENSMUSG00000021069.18	ENST00000544180.6	2625	19	-13	11131	-13	-11131	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTACTTTGTGGTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	70274386	70248729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336_70263441_70266362_70266442_70274114
ENSMUSG00000021071.18_70291880_70295118_1	chr12	-	1426	2	ISM	ENSMUSG00000021071.18	ENSMUST00000223160.2	3574	10	98982	0	98946	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCGCGCTTACGACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	70295118	70291879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70293226_70295038
ENSMUSG00000021071.18_70291880_70295180_1	chr12	-	1488	2	ISM	ENSMUSG00000021071.18	ENSMUST00000223160.2	3574	10	98920	0	98884	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCGCGCTTACGACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	70295180	70291879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70293226_70295038
ENSMUSG00000021071.18_70292073_70297805_1	chr12	-	1391	3	ISM	ENSMUSG00000021071.18	ENSMUST00000223160.2	3574	10	96295	193	96259	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCACCACCCCGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	70297805	70292072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70293226_70295038_70295202_70297730
ENSMUSG00000021071.18_70292203_70297930_1	chr12	-	1386	3	ISM	ENSMUSG00000021071.18	ENSMUST00000223160.2	3574	10	96170	323	96134	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGTCACTCACCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	70297930	70292202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70293226_70295038_70295202_70297730
ENSMUSG00000021071.18_70292254_70297996_1	chr12	-	1401	3	ISM	ENSMUSG00000021071.18	ENSMUST00000223160.2	3574	10	96104	374	96068	-374	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGACAAGTACCAACCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	70297996	70292253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70293226_70295038_70295202_70297730
ENSMUSG00000021071.18_70295076_70314892_1	chr12	-	733	5	NNC	ENSMUSG00000021071.18	novel	2638	12	NA	NA	79172	-43	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTCCCTGCTGTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	70314892	70295075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_70295202_70297730_70298035_70299201_70299259_70301811_70302001_70314835
ENSMUSG00000021071.18_70295102_70314927_1	chr12	-	751	6	ISM	ENSMUSG00000021071.18	ENST00000338969.9	2638	12	79334	69	79137	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCGTTTGAGAACGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	70314927	70295101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70295202_70297730_70298035_70298793_70298818_70299216_70299259_70301811_70302001_70314835
ENSMUSG00000021071.18_70297731_70319231_1	chr12	-	846	6	ISM	ENSMUSG00000021071.18	ENST00000338969.9	2638	12	75030	2698	74833	-2698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCCTGCAGCCCCACGCC	NA	NA	NA	NA	NA	NA	NA	NA	70319231	70297730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70298035_70298793_70298818_70299216_70299259_70301811_70302001_70314835_70314975_70319083
ENSMUSG00000021071.18_70297939_70327433_1	chr12	-	740	7	ISM	ENSMUSG00000021071.18	ENST00000338969.9	2638	12	66828	2906	66631	-2906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCTGGGGAAAACCGGC	NA	NA	NA	NA	NA	NA	NA	NA	70327433	70297938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70298035_70298793_70298818_70299216_70299259_70301811_70302001_70314835_70314975_70319083_70319230_70327329
ENSMUSG00000021071.18_70297939_70327466_1	chr12	-	764	6	NNC	ENSMUSG00000021071.18	novel	2638	12	NA	NA	66598	-2906	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCTGGGGAAAACCGGC	NA	NA	NA	NA	NA	NA	NA	NA	70327466	70297938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_70298035_70299201_70299259_70301811_70302001_70314835_70314975_70319083_70319230_70327329
ENSMUSG00000021071.18_70298794_70328719_1	chr12	-	807	7	ISM	ENSMUSG00000021071.18	ENST00000338969.9	2638	12	65542	3761	65345	-3761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGAACACCATTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	70328719	70298793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70298818_70299216_70299259_70301811_70302001_70314835_70314975_70319083_70319230_70327329_70327484_70328606
ENSMUSG00000021071.18_70301811_70337092_1	chr12	-	788	6	ISM	ENSMUSG00000021071.18	ENST00000338969.9	2638	12	57169	6778	56972	-6778	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGAGCTGTCAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	70337092	70301810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70302001_70314835_70314975_70319083_70319230_70327329_70327484_70328606_70328718_70337044
ENSMUSG00000021071.18_70301886_70393615_1	chr12	-	1391	8	ISM	ENSMUSG00000021071.18	ENST00000684578.1	4359	13	449	10572	449	-6853	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTACTTTGATTTCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	70393615	70301885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70302001_70314835_70314975_70319083_70319242_70327329_70327484_70328606_70328718_70337044_70337168_70339039_70339136_70393120
ENSMUSG00000021071.18_70301950_70339080_1	chr12	-	765	7	ISM	ENSMUSG00000021071.18	ENST00000338969.9	2638	12	55181	6917	54984	-6917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGCTCCGTAGGATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	70339080	70301949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70302001_70314835_70314975_70319083_70319230_70327329_70327484_70328606_70328718_70337044_70337168_70339039
ENSMUSG00000021071.18_70314877_70393863_1	chr12	-	1483	7	FSM	ENSMUSG00000021071.18	ENSMUST00000222603.3	3700	7	261	1956	201	-1954	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCCCTACAGCAAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	70393863	70314876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_70314975_70319083_70319242_70327329_70327484_70328606_70328718_70337044_70337168_70339039_70339136_70393120
ENSMUSG00000021071.18_70314909_70393211_1	chr12	-	787	7	ISM	ENSMUSG00000021071.18	ENST00000338969.9	2638	12	1050	19876	853	-1986	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCGGGTTAAGGCCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	70393211	70314908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70314975_70319083_70319230_70327329_70327484_70328606_70328718_70337044_70337168_70339039_70339136_70393120
ENSMUSG00000021071.18_70314957_70393280_1	chr12	-	808	7	ISM	ENSMUSG00000021071.18	ENST00000338969.9	2638	12	981	19924	784	-2034	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAATGTGCACAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	70393280	70314956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70314975_70319083_70319230_70327329_70327484_70328606_70328718_70337044_70337168_70339039_70339136_70393120
ENSMUSG00000021071.18_70327330_70393394_1	chr12	-	758	5	ISM	ENSMUSG00000021071.18	ENSMUST00000222603.3	3700	7	730	14409	670	-14407	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTCCTTGTGTCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	70393394	70327329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_70327484_70328606_70328718_70337044_70337168_70339039_70339136_70393120
ENSMUSG00000021072.13_70499869_70513183_1	chr12	+	1164	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	0	1631	0	324	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGTGAGATTCGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	70499868	70513183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ENSMUSG00000021072.13_70499869_70513236_1	chr12	+	1217	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	0	1578	0	377	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATTACCTTAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	70499868	70513236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ENSMUSG00000021072.13_70499969_70513323_1	chr12	+	1204	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	100	1491	100	464	multi-exon	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGAACATTGCCCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	70499968	70513323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ENSMUSG00000021072.13_70502812_70512859_2	chr12	+	575	7	NNC	ENSMUSG00000021072.13	novel	606	7	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCCACTTCTCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	70502811	70512859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507257_70507355_70511173_70511233_70512751
ENSMUSG00000021072.13_70502812_70512859_3	chr12	+	578	7	NNC	ENSMUSG00000021072.13	novel	606	7	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCCACTTCTCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	70502811	70512859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511233_70512753
ENSMUSG00000021072.13_70502812_70512859_4	chr12	+	575	7	NNC	ENSMUSG00000021072.13	novel	606	7	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCCACTTCTCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	70502811	70512859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_70502902_70503354_70503401_70505552_70505677_70507118_70507165_70507252_70507355_70511173_70511233_70512751
ENSMUSG00000021072.13_70502812_70512859_5	chr12	+	580	7	FSM	ENSMUSG00000021072.13	ENST00000438427.1	606	7	26	0	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCCACTTCTCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	70502811	70512859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511233_70512751
ENSMUSG00000021072.13_70502812_70513456_1	chr12	+	1185	7	ISM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	2943	1358	26	597	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATTACATTTAGGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	70502811	70513456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ENSMUSG00000021072.13_70505592_70513619_1	chr12	+	1173	5	ISM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	5723	1195	2806	760	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTGTGTTTGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	70505591	70513619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ENSMUSG00000021072.13_70505647_70513668_1	chr12	+	1167	5	ISM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	5778	1146	2861	809	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGTTTACTGAGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	70505646	70513668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ENSMUSG00000021072.13_70507272_70513791_1	chr12	+	1190	3	ISM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	7403	1023	4486	932	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGATTTTTAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	70507271	70513791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_70507355_70511173_70511241_70512751
ENSMUSG00000021072.13_70507340_70513834_1	chr12	+	1165	3	ISM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	7471	980	4554	975	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTTGGAAATTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	70507339	70513834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_70507355_70511173_70511241_70512751
ENSMUSG00000021076.7_70984717_71003097_1	chr12	+	697	9	ISM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	86	8395	86	-8395	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATTTAATATTGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	70984716	71003097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046
ENSMUSG00000021076.7_70987572_71003447_1	chr12	+	711	9	ISM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	2941	8045	2941	-8045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGACATTATTTTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	70987571	71003447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373
ENSMUSG00000021076.7_70989031_71004887_1	chr12	+	722	9	ISM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	4400	6605	4400	-6605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTATACAATTTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	70989030	71004887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805
ENSMUSG00000021076.7_70996515_71008688_1	chr12	+	633	8	ISM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	11884	2804	11884	-2804	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGGAATACTATAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	70996514	71008688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
ENSMUSG00000021076.7_70999757_71008835_1	chr12	+	716	7	ISM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	15126	2657	15126	-2657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCTTGCTTATTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	70999756	71008835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
ENSMUSG00000021076.7_71003372_71009007_1	chr12	+	727	4	ISM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	18741	2485	18741	-2485	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGTGAGATATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	71003371	71009007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_71003448_71004805_71004888_71006614_71006817_71008640
ENSMUSG00000021076.7_71006680_71009138_1	chr12	+	635	2	ISM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	22049	2354	22049	-2354	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAGTGATAGATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	71006679	71009138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_71006817_71008640
ENSMUSG00000021079.17_71169963_71178813_1	chr12	-	623	4	NNC	ENSMUSG00000021079.17	novel	629	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGAGTATCATTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	71178813	71169962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_71170392_71172235_71172326_71173106_71173172_71178774
ENSMUSG00000021079.17_71169963_71178813_2	chr12	-	629	4	FSM	ENSMUSG00000021079.17	ENST00000556007.6	629	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGAGTATCATTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	71178813	71169962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_71170392_71172235_71172332_71173106_71173172_71178774
ENSMUSG00000021079.17_71170167_71172333_1	chr12	-	305	2	ISM	ENSMUSG00000021079.17	ENST00000556367.6	400	4	6480	-7	6480	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCACCAGAAAGAGTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	71172333	71170166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_71170374_71172235
ENSMUSG00000021079.17_71170167_71173174_1	chr12	-	364	3	NNC	ENSMUSG00000021079.17	novel	836	6	NA	NA	5639	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCACCAGAAAGAGTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	71173174	71170166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_71170367_71172235_71172332_71173106
ENSMUSG00000021079.17_71170167_71178813_1	chr12	-	410	4	ISM	ENSMUSG00000021079.17	ENSMUST00000221892.2	734	5	4588	204	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCACCAGAAAGAGTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	71178813	71170166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_71170377_71172235_71172332_71173106_71173172_71178774
ENSMUSG00000021090.17_72497535_72517051_1	chr12	+	1463	12	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	1439	40208	1439	-26962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCGTTTTGCCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	72497534	72517051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72497592_72497998_72498063_72498736_72498808_72500818_72501002_72502756_72502913_72506606_72506789_72507564_72507697_72510098_72510276_72510606_72510725_72513631_72513765_72515942_72516066_72516984
ENSMUSG00000021090.17_72498042_72520627_1	chr12	+	1469	12	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	1946	36632	1946	-23386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATTCTGAAGGATTAGT	NA	NA	NA	NA	NA	NA	NA	NA	72498041	72520627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72498063_72498736_72498808_72500818_72501002_72502756_72502913_72506606_72506789_72507564_72507697_72510098_72510276_72510606_72510725_72513631_72513765_72515942_72516066_72516984_72517101_72520570
ENSMUSG00000021090.17_72500922_72522858_1	chr12	+	1472	11	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	4826	34401	4826	-21155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCAAGCTAACTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	72500921	72522858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72501002_72502756_72502913_72506606_72506789_72507564_72507697_72510098_72510276_72510606_72510725_72513631_72513765_72515942_72516066_72516984_72517101_72520570_72520784_72522816
ENSMUSG00000021090.17_72502827_72524043_1	chr12	+	1467	11	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	6731	33216	6731	-19970	internal_fragment	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACTGAAGCATTTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	72502826	72524043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72502913_72506606_72506789_72507564_72507697_72510098_72510276_72510606_72510725_72513631_72513765_72515942_72516066_72516984_72517101_72520570_72520784_72522816_72522937_72523976
ENSMUSG00000021090.17_72502885_72524094_1	chr12	+	1460	11	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	6789	33165	6789	-19919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATCAATGTGCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	72502884	72524094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72502913_72506606_72506789_72507564_72507697_72510098_72510276_72510606_72510725_72513631_72513765_72515942_72516066_72516984_72517101_72520570_72520784_72522816_72522937_72523976
ENSMUSG00000021090.17_72506714_72525507_1	chr12	+	1477	11	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	10618	31752	10618	-18506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCAGAGCAGCTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	72506713	72525507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72506789_72507564_72507697_72510098_72510276_72510606_72510725_72513631_72513765_72515942_72516066_72516984_72517101_72520570_72520784_72522816_72522937_72523976_72524169_72525429
ENSMUSG00000021090.17_72507602_72528284_1	chr12	+	1496	11	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	11506	28975	11506	-15729	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCCAAGCTGGGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	72507601	72528284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72507697_72510098_72510276_72510606_72510725_72513631_72513765_72515942_72516066_72516984_72517101_72520570_72520784_72522816_72522937_72523976_72524169_72525429_72525556_72528201
ENSMUSG00000021090.17_72510152_72529744_1	chr12	+	1477	11	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	14056	27515	14056	-14269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGTTCAGCAATAATAACC	NA	NA	NA	NA	NA	NA	NA	NA	72510151	72529744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72510276_72510606_72510725_72513631_72513765_72515942_72516066_72516984_72517101_72520570_72520784_72522816_72522937_72523976_72524169_72525429_72525556_72528201_72528337_72529667
ENSMUSG00000021090.17_72510217_72529809_1	chr12	+	1477	11	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	14121	27450	14121	-14204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATTAGACGGCAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	72510216	72529809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72510276_72510606_72510725_72513631_72513765_72515942_72516066_72516984_72517101_72520570_72520784_72522816_72522937_72523976_72524169_72525429_72525556_72528201_72528337_72529667
ENSMUSG00000021090.17_72510665_72533012_1	chr12	+	1464	11	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	14569	24247	14569	-11001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGTTTGATAACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	72510664	72533012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72510725_72513631_72513765_72515942_72516066_72516984_72517101_72520570_72520784_72522816_72522937_72523976_72524169_72525429_72525556_72528201_72528337_72529667_72529846_72532944
ENSMUSG00000021090.17_72513630_72533166_1	chr12	+	1560	10	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	17534	24093	17534	-10847	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCGCCTGGGCTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	72513629	72533166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72513765_72515942_72516066_72516984_72517101_72520570_72520784_72522816_72522937_72523976_72524169_72525429_72525556_72528201_72528337_72529667_72529846_72532944
ENSMUSG00000021090.17_72515972_72533836_1	chr12	+	1463	10	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	19876	23423	19876	-10177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTGTAATATTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	72515971	72533836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72516066_72516984_72517101_72520570_72520784_72522816_72522937_72523976_72524169_72525429_72525556_72528201_72528337_72529667_72529846_72532944_72533166_72533768
ENSMUSG00000021090.17_72516981_72542371_1	chr12	+	1461	10	ISM	ENSMUSG00000021090.17	ENSMUST00000161284.3	3817	25	28341	1642	20885	-1642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGACGGCTTACCTC	NA	NA	NA	NA	NA	NA	NA	NA	72516980	72542371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72517101_72520570_72520784_72522816_72522937_72523976_72524169_72525429_72525556_72528201_72528337_72529667_72529846_72532944_72533166_72533768_72533892_72542338
ENSMUSG00000021090.17_72517020_72542443_1	chr12	+	1494	10	ISM	ENSMUSG00000021090.17	ENSMUST00000161284.3	3817	25	28380	1570	20924	-1570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACTGGACTTCATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	72517019	72542443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72517101_72520570_72520784_72522816_72522937_72523976_72524169_72525429_72525556_72528201_72528337_72529667_72529846_72532944_72533166_72533768_72533892_72542338
ENSMUSG00000021090.17_72520709_72544623_1	chr12	+	1473	11	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	24613	12636	24613	610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCAGCAGACAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	72520708	72544623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72520784_72522816_72522937_72523976_72524169_72525429_72525556_72528201_72528337_72529667_72529846_72532944_72533166_72533768_72533892_72542338_72542470_72543822_72543932_72544560
ENSMUSG00000021090.17_72520737_72544700_1	chr12	+	1522	11	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	24641	12559	24641	687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTACTTTAAAAAAAAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	72520736	72544700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72520784_72522816_72522937_72523976_72524169_72525429_72525556_72528201_72528337_72529667_72529846_72532944_72533166_72533768_72533892_72542338_72542470_72543822_72543932_72544560
ENSMUSG00000021090.17_72522848_72546397_1	chr12	+	1489	11	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	26752	10862	26752	2384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTTCTGCATTTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	72522847	72546397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72522937_72523976_72524169_72525429_72525556_72528201_72528337_72529667_72529846_72532944_72533166_72533768_72533892_72542338_72542470_72543822_72543932_72544560_72544701_72546352
ENSMUSG00000021090.17_72524080_72547585_1	chr12	+	1475	11	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	27984	9674	27984	3572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACACCGCGTTTTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	72524079	72547585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72524169_72525429_72525556_72528201_72528337_72529667_72529846_72532944_72533166_72533768_72533892_72542338_72542470_72543822_72543932_72544560_72544701_72546352_72546490_72547499
ENSMUSG00000021090.17_72524126_72547653_1	chr12	+	1497	11	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	28030	9606	28030	3640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAGCAAACTGCAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72524125	72547653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72524169_72525429_72525556_72528201_72528337_72529667_72529846_72532944_72533166_72533768_72533892_72542338_72542470_72543822_72543932_72544560_72544701_72546352_72546490_72547499
ENSMUSG00000021090.17_72528259_72553120_1	chr12	+	1469	11	NNC	ENSMUSG00000021090.17	novel	4297	30	NA	NA	32163	-4139	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATGGAATTCCTATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	72528258	72553120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_72528337_72529667_72529846_72532944_72533166_72533768_72533892_72542338_72542470_72543822_72543932_72544560_72544701_72546352_72546490_72547499_72547718_72550230_72550304_72553059
ENSMUSG00000021090.17_72529719_72557140_1	chr12	+	1451	11	NNC	ENSMUSG00000021090.17	novel	4297	30	NA	NA	33623	-119	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCATTCTGCCACGTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	72529718	72557140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_72529846_72532944_72533166_72533768_72533892_72542338_72542470_72543822_72543932_72544560_72544701_72546352_72546490_72547499_72547718_72550230_72550304_72553059_72553201_72557109
ENSMUSG00000021090.17_72529770_72557212_1	chr12	+	1472	11	NNC	ENSMUSG00000021090.17	novel	4297	30	NA	NA	33674	-47	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGACCTGACTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	72529769	72557212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_72529846_72532944_72533166_72533768_72533892_72542338_72542470_72543822_72543932_72544560_72544701_72546352_72546490_72547499_72547718_72550230_72550304_72553059_72553201_72557109
ENSMUSG00000021094.11_72697309_72699083_1	chr12	-	158	2	ISM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	12600	182	12600	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAACAGCGTATGTACAG	NA	NA	NA	NA	NA	NA	NA	NA	72699083	72697308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_72697392_72699008
ENSMUSG00000021094.11_72697359_72699149_1	chr12	-	174	2	ISM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	12534	232	12534	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGGATTGAAACAACCA	NA	NA	NA	NA	NA	NA	NA	NA	72699149	72697358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_72697392_72699008
ENSMUSG00000021094.11_72699081_72699914_1	chr12	-	184	2	ISM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	11769	1954	11769	-1954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCAACCTGGGCCGCATG	NA	NA	NA	NA	NA	NA	NA	NA	72699914	72699080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_72699225_72699874
ENSMUSG00000021094.11_72699143_72699960_1	chr12	-	168	2	ISM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	11723	2016	11723	-2016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAAGGAAGTCTGGATC	NA	NA	NA	NA	NA	NA	NA	NA	72699960	72699142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_72699225_72699874
ENSMUSG00000021094.11_72703159_72704117_1	chr12	-	171	2	ISM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	7566	6032	7566	-6032	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATTGTGACTGTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	72704117	72703158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_72703314_72704101
ENSMUSG00000021094.11_72703208_72704175_1	chr12	-	180	2	ISM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	7508	6081	7508	-6081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTTGACCAAGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	72704175	72703207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_72703314_72704101
ENSMUSG00000021094.11_72704135_72706223_1	chr12	-	180	2	ISM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	5460	7008	5460	-7008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACCAAAGCCGTTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	72706223	72704134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_72704209_72706117
ENSMUSG00000021094.11_72704194_72706273_1	chr12	-	171	2	ISM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	5410	7067	5410	-7067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGATATACTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	72706273	72704193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_72704209_72706117
ENSMUSG00000021103.13_73170491_73320626_2	chr12	+	2369	8	FSM	ENSMUSG00000021103.13	ENSMUST00000021523.7	2505	8	0	136	0	-136	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATTCAATCTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	73170490	73320626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_73170701_73214773_73214927_73217367_73217442_73225978_73226083_73228557_73228699_73234913_73235040_73265794_73265917_73319187
ENSMUSG00000021103.13_73214774_73320763_2	chr12	+	2296	7	ISM	ENSMUSG00000021103.13	ENSMUST00000021523.7	2505	8	44283	-1	44283	1	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGACTTAGAAATCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	73214773	73320763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73214927_73217367_73217442_73225978_73226083_73228557_73228699_73234913_73235040_73265794_73265917_73319187
ENSMUSG00000021109.14_73954793_73988541_1	chr12	+	1884	11	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	115	5763	115	-5763	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATATGGTCAATGTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	73954792	73988541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461
ENSMUSG00000021109.14_73955001_73988876_1	chr12	+	1903	12	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	323	5428	323	-5428	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCCAGTTACAGAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	73955000	73988876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734
ENSMUSG00000021109.14_73955051_73988938_1	chr12	+	1915	12	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	373	5366	373	-5366	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAACAGAGACGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	73955050	73988938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734
ENSMUSG00000021109.14_73973376_73989071_1	chr12	+	1955	11	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	18698	5233	18698	-5233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCAGACAGAGCAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	73973375	73989071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734
ENSMUSG00000021109.14_73973376_73989146_1	chr12	+	2030	11	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	18698	5158	18698	-5158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAATCAAAGGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	73973375	73989146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734
ENSMUSG00000021109.14_73975021_73991758_1	chr12	+	1901	11	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	20343	2546	20343	-2546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTAGTGAACAGAATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	73975020	73991758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684
ENSMUSG00000021109.14_73977493_73992410_1	chr12	+	1925	11	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	22815	1894	22815	-1894	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACAAGGCAGCAGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	73977492	73992410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ENSMUSG00000021109.14_73979137_73992586_1	chr12	+	1961	10	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	24459	1718	24459	-1718	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTATATTTTCTATATC	NA	NA	NA	NA	NA	NA	NA	NA	73979136	73992586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ENSMUSG00000021109.14_73984444_73992807_1	chr12	+	1944	8	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	29766	1497	29766	-1497	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGAGTTTGTCCCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	73984443	73992807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ENSMUSG00000021109.14_73986368_73992974_1	chr12	+	1915	7	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	31690	1330	31690	-1330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAATATATTTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73986367	73992974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ENSMUSG00000021109.14_73986431_73993052_1	chr12	+	1930	7	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	31753	1252	31753	-1252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTGGCCTATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	73986430	73993052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ENSMUSG00000021109.14_73987185_73993226_1	chr12	+	1948	6	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	32507	1078	32507	-1078	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTATCTGGTGTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	73987184	73993226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ENSMUSG00000021109.14_73987279_73993259_1	chr12	+	1887	6	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	32601	1045	32601	-1045	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTCCCTCTGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	73987278	73993259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ENSMUSG00000021109.14_73988463_73993425_1	chr12	+	1925	5	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	33785	879	33785	-879	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAAAATATGATGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	73988462	73993425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ENSMUSG00000021109.14_73988577_73993526_1	chr12	+	1912	5	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	33899	778	33899	-778	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAGAGTTGTCATAGTA	NA	NA	NA	NA	NA	NA	NA	NA	73988576	73993526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ENSMUSG00000021109.14_73988839_73993685_1	chr12	+	1917	4	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	34161	619	34161	-619	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAATAACATTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	73988838	73993685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73989160_73990852_73990962_73991684_73991812_73992325
ENSMUSG00000021109.14_73989071_73993913_1	chr12	+	1913	4	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	34393	391	34393	-391	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTACAAACCTTCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	73989070	73993913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73989160_73990852_73990962_73991684_73991812_73992325
ENSMUSG00000021109.14_73991685_73994304_1	chr12	+	2106	2	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	37007	0	37007	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCATATCTTTCTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	73991684	73994304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73991812_73992325
ENSMUSG00000021113.6_74029272_74031842_1	chr12	+	1288	2	ISM	ENSMUSG00000021113.6	ENSMUST00000021532.6	6275	10	17972	3898	17972	-3898	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGACATCGTTATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	74029271	74031842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_74029354_74030636
ENSMUSG00000021114.10_78888448_78892011_1	chr12	-	1949	2	ISM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	16401	949	16321	-949	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAACTGACTCATGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	78892011	78888447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_78890385_78891999
ENSMUSG00000021114.10_78888608_78895187_1	chr12	-	1941	4	ISM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	13225	1109	13145	-1109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAACCAGATGTAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	78895187	78888607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169
ENSMUSG00000021114.10_78888930_78904034_1	chr12	-	1932	8	ISM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	4378	1431	4298	830	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCAGTTGGGATTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	78904034	78888929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000
ENSMUSG00000021114.10_78889046_78908269_1	chr12	-	1977	9	FSM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	143	1547	63	714	multi-exon	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAATCTAGAATTTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	78908269	78889045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
ENSMUSG00000021114.10_78889113_78908289_1	chr12	-	1930	9	FSM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	123	1614	43	647	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGGAAAGAAAGACTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	78908289	78889112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
ENSMUSG00000021114.10_78889158_78908412_1	chr12	-	2008	9	FSM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	0	1659	0	602	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACACACCCCAAGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	78908412	78889157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
ENSMUSG00000021114.10_78889776_78908332_1	chr12	-	1013	5	FSM	ENSMUSG00000021114.10	ENST00000555474.5	1029	5	0	16	0	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAATGATTTTAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	78908332	78889775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_78890385_78891999_78892079_78894540_78894608_78904000_78904119_78908192
ENSMUSG00000021114.10_78889776_78908332_2	chr12	-	1006	5	NNC	ENSMUSG00000021114.10	novel	1029	5	NA	NA	0	-16	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAATGATTTTAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	78908332	78889775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_78890378_78891999_78892079_78894540_78894608_78904000_78904119_78908192
ENSMUSG00000021115.16_105976575_106028983_1	chr12	+	1017	10	ISM	ENSMUSG00000021115.16	ENST00000679727.1	1421	12	8	12503	0	-65	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCTATAGGAAGTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	105976574	106028983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_105976618_106002798_106002964_106017146_106017264_106018018_106018107_106022066_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888
ENSMUSG00000021115.16_106002798_106041459_1	chr12	+	1350	11	FSM	ENSMUSG00000021115.16	ENST00000680849.1	1377	11	0	27	0	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	9542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGGGTAATTTATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	106002797	106041459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_106002964_106017146_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ENSMUSG00000021115.16_106002798_106041486_1	chr12	+	1449	12	FSM	ENSMUSG00000021115.16	ENST00000679918.1	1450	12	1	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTCGTCATAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	106002797	106041486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_106002964_106017146_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106041265
ENSMUSG00000021115.16_106002798_106041486_2	chr12	+	1372	11	NNC	ENSMUSG00000021115.16	novel	1377	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8030	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTCGTCATAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	106002797	106041486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_106002964_106017146_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028893_106029068_106036783_106036875_106041265
ENSMUSG00000021115.16_106002849_106036876_1	chr12	+	1101	10	ISM	ENSMUSG00000021115.16	ENST00000679727.1	1421	12	26282	4610	50	-4528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCCACCCTTGCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	106002848	106036876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_106002964_106017146_106017264_106018018_106018107_106022066_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783
ENSMUSG00000021115.16_106002849_106041459_1	chr12	+	1290	11	ISM	ENSMUSG00000021115.16	ENST00000679903.1	1413	12	26282	22	50	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGGGTAATTTATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	106002848	106041459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_106002964_106017146_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036792_106036875_106041265
ENSMUSG00000021115.16_106002849_106041486_1	chr12	+	1325	11	NNC	ENSMUSG00000021115.16	novel	1378	11	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	7738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTCGTCATAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	106002848	106041486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_106002964_106017146_106017264_106018019_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ENSMUSG00000021115.16_106002849_106041486_2	chr12	+	1326	11	FSM	ENSMUSG00000021115.16	ENST00000680849.1	1377	11	51	0	50	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTCGTCATAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	106002848	106041486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_106002964_106017146_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ENSMUSG00000021115.16_106017194_106041334_1	chr12	+	1006	10	ISM	ENSMUSG00000021115.16	ENST00000679727.1	1421	12	40627	152	14395	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTTTTCTCCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	106017193	106041334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_106017264_106018018_106018107_106022066_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ENSMUSG00000021115.16_106017215_106041316_1	chr12	+	882	9	ISM	ENSMUSG00000021115.16	ENST00000680851.1	1285	10	14416	170	14416	-88	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGCCTATTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	106017214	106041316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106041265
ENSMUSG00000021115.16_106018019_106041459_1	chr12	+	976	8	ISM	ENSMUSG00000021115.16	ENST00000680851.1	1285	10	15220	27	15220	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGGGTAATTTATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	106018018	106041459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106041265
ENSMUSG00000021115.16_106018019_106041459_2	chr12	+	1061	9	ISM	ENSMUSG00000021115.16	ENST00000679727.1	1421	12	41452	27	15220	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGGGTAATTTATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	106018018	106041459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_106018107_106022066_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ENSMUSG00000021116.11_78913395_78927948_1	chr12	+	529	5	ISM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	4802	5836	4802	-5836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGCCCTGAGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	78913394	78927948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905
ENSMUSG00000021116.11_78913465_78927965_1	chr12	+	476	5	ISM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	4872	5819	4872	-5819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTTGAATTGTTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	78913464	78927965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905
ENSMUSG00000021116.11_78913500_78930048_1	chr12	+	496	6	ISM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	4907	3736	4907	-3736	internal_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAGGTATGTGATGACAA	NA	NA	NA	NA	NA	NA	NA	NA	78913499	78930048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031
ENSMUSG00000021116.11_78921336_78930108_1	chr12	+	516	5	ISM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	12743	3676	12743	-3676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGCTATGGCAGTTATCA	NA	NA	NA	NA	NA	NA	NA	NA	78921335	78930108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031
ENSMUSG00000021116.11_78923880_78931599_1	chr12	+	522	5	ISM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	15287	2185	15287	-2185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGGCAGCTGGAACGGC	NA	NA	NA	NA	NA	NA	NA	NA	78923879	78931599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ENSMUSG00000021116.11_78923940_78931645_1	chr12	+	508	5	ISM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	15347	2139	15347	-2139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGATGATGATGCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	78923939	78931645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ENSMUSG00000021116.11_78924001_78931700_1	chr12	+	502	5	ISM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	15408	2084	15408	-2084	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTCCAATTTAAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	78924000	78931700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ENSMUSG00000021116.11_78930030_78931923_1	chr12	+	505	2	ISM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	21437	1861	21437	-1861	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATCTTAAACAGCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	78930029	78931923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_78930176_78931564
ENSMUSG00000021120.12_79128776_79132490_1	chr12	-	649	3	ISM	ENSMUSG00000021120.12	ENSMUST00000072154.9	2339	4	3935	1338	3929	-754	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGTTAAAATCTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79132490	79128775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_79129271_79130389_79130474_79132420
ENSMUSG00000021123.13_79259430_79269438_1	chr12	+	1204	4	ISM	ENSMUSG00000021123.13	ENSMUST00000122227.8	1624	7	3725	0	3725	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGGTGTCTTTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	79259429	79269438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79259532_79260317_79260528_79265449_79265640_79268736
ENSMUSG00000021124.14_79202791_79207356_1	chr12	-	791	3	ISM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	12085	0	12085	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCATTTTCTGATTCGT	NA	NA	NA	NA	NA	NA	NA	NA	79207356	79202790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_79203346_79204621_79204684_79207182
ENSMUSG00000021124.14_79203103_79213183_1	chr12	-	730	5	ISM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	6258	312	6258	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTGAAGGAACAGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	79213183	79203102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124
ENSMUSG00000021124.14_79203291_79219103_1	chr12	-	652	6	FSM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	338	500	338	-500	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCGGTCTGGTGTATTA	NA	NA	NA	NA	NA	NA	NA	NA	79219103	79203290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
ENSMUSG00000021124.14_79204622_79219222_1	chr12	-	716	5	ISM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	219	1831	219	-1831	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTTCAAAAACCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	79219222	79204621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
ENSMUSG00000021124.14_79207183_79219341_1	chr12	-	773	4	ISM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	100	4392	100	-4392	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTGGGCAATGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	79219341	79207182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_79207357_79211721_79211914_79213124_79213184_79218993
ENSMUSG00000021127.8_80155104_80159652_1	chr12	-	2279	2	FSM	ENSMUSG00000021127.8	ENSMUST00000021552.3	2990	2	135	576	116	368	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTGACGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	80159652	80155103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_80157323_80159592
ENSMUSG00000021127.8_80155148_80159772_1	chr12	-	2355	2	FSM	ENSMUSG00000021127.8	ENSMUST00000021552.3	2990	2	15	620	0	324	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATATTCTTTTATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	80159772	80155147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_80157323_80159592
ENSMUSG00000021131.15_80680796_80691115_1	chr12	-	1286	4	NNC	ENSMUSG00000021131.15	novel	1293	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTTCTTATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	80691115	80680795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_80681302_80684270_80684385_80687730_80687819_80690537
ENSMUSG00000021131.15_80680796_80691115_2	chr12	-	1285	4	NNC	ENSMUSG00000021131.15	novel	1293	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTTCTTATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	80691115	80680795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_80681294_80684263_80684385_80687730_80687819_80690537
ENSMUSG00000021134.18_80992306_80997281_1	chr12	+	1494	8	NNC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2973	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	80992305	80997281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996272_80996379_80996493
ENSMUSG00000021134.18_80992359_80997271_1	chr12	+	1426	8	FSM	ENSMUSG00000021134.18	ENST00000553635.5	1340	8	-29	-57	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAACTGCTTTTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	80992358	80997271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_80992443_80993349_80993495_80994093_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
ENSMUSG00000021134.18_80993398_80995036_1	chr12	+	471	5	FSM	ENSMUSG00000021134.18	ENST00000554021.1	522	5	51	0	51	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGCCGGTCTAGACGT	NA	NA	NA	NA	NA	NA	NA	NA	80993397	80995036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80994902
ENSMUSG00000021139.18_81405634_81579535_1	chr12	-	899	6	FSM	ENSMUSG00000021139.18	ENSMUST00000164386.8	1043	6	144	0	121	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAATTGCTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	81579535	81405633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
ENSMUSG00000021139.18_81518702_81527776_1	chr12	-	559	3	ISM	ENSMUSG00000091803.8	ENSMUST00000002757.11	2007	4	4118	1224	4071	165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTCACTGGAATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	81527776	81518701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_81519126_81521360_81521424_81527704
ENSMUSG00000021143.11_112978153_113033803_1	chr12	+	2377	22	ISM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	25	4218	0	-1954	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGGTCCCTCCAGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	112978152	113033803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676
ENSMUSG00000021143.11_113024770_113036286_1	chr12	+	2341	12	ISM	ENSMUSG00000021143.11	ENSMUST00000220541.2	3101	23	46617	-529	46617	528	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAGGCCACCTCCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	113024769	113036286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ENSMUSG00000021143.11_113025343_113036450_1	chr12	+	2366	11	ISM	ENSMUSG00000021143.11	ENSMUST00000220541.2	3101	23	47190	-693	47190	692	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCATGAAGGGGTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	113025342	113036450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ENSMUSG00000021143.11_113033784_113037281_1	chr12	+	2358	3	ISM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	55656	740	55631	-740	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATGGAGAAGCACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	113033783	113037281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113033904_113034287_113034402_113035157
ENSMUSG00000021143.11_113033839_113037361_1	chr12	+	2383	3	ISM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	55711	660	55686	-660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTTTGCATCCGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	113033838	113037361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113033904_113034287_113034402_113035157
ENSMUSG00000021144.15_113061898_113094620_1	chr12	+	1332	13	ISM	ENSMUSG00000021144.15	ENSMUST00000109727.9	2789	20	0	6205	0	-6173	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGCTGTCCCGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	113061897	113094620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504
ENSMUSG00000021144.15_113062021_113094957_1	chr12	+	1231	14	ISM	ENSMUSG00000021144.15	ENSMUST00000109727.9	2789	20	123	5868	78	-5836	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGGGTCCCCCTAACA	NA	NA	NA	NA	NA	NA	NA	NA	113062020	113094957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935
ENSMUSG00000021144.15_113075764_113095087_1	chr12	+	1318	13	ISM	ENSMUSG00000021144.15	ENSMUST00000109727.9	2789	20	13866	5738	13821	-5706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGGGACACACCATAC	NA	NA	NA	NA	NA	NA	NA	NA	113075763	113095087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935
ENSMUSG00000021144.15_113083847_113095300_1	chr12	+	1246	12	ISM	ENSMUSG00000021144.15	ENSMUST00000109727.9	2789	20	21949	5525	21904	-5493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCGTGAGATCCTACG	NA	NA	NA	NA	NA	NA	NA	NA	113083846	113095300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192
ENSMUSG00000021144.15_113086735_113096958_1	chr12	+	1348	11	ISM	ENSMUSG00000021144.15	ENSMUST00000109727.9	2789	20	24837	3867	24792	-3835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTGAGCTTAAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	113086734	113096958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804
ENSMUSG00000021144.15_113090393_113099448_1	chr12	+	1297	12	ISM	ENSMUSG00000021144.15	ENSMUST00000069690.5	2697	20	28450	1345	28450	-1345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAATGGGTGACTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	113090392	113099448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416
ENSMUSG00000021144.15_113091681_113100188_1	chr12	+	1266	12	ISM	ENSMUSG00000021144.15	ENSMUST00000069690.5	2697	20	29738	605	29738	-605	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTACAAACCCATTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	113091680	113100188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
ENSMUSG00000021144.15_113091736_113100289_1	chr12	+	1312	12	ISM	ENSMUSG00000021144.15	ENSMUST00000069690.5	2697	20	29793	504	29793	-504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTCACCCACACCGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	113091735	113100289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
ENSMUSG00000021144.15_113091808_113100289_1	chr12	+	1240	12	ISM	ENSMUSG00000021144.15	ENSMUST00000069690.5	2697	20	29865	504	29865	-504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTCACCCACACCGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	113091807	113100289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
ENSMUSG00000021144.15_113094154_113100397_1	chr12	+	1240	10	ISM	ENSMUSG00000021144.15	ENSMUST00000069690.5	2697	20	32211	396	32211	-396	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCTCTGTTTCCGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	113094153	113100397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
ENSMUSG00000021144.15_113094587_113100581_1	chr12	+	1283	9	ISM	ENSMUSG00000021144.15	ENSMUST00000069690.5	2697	20	32644	212	32644	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCTTCTCACCCGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	113094586	113100581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
ENSMUSG00000021144.15_113095168_113100826_1	chr12	+	1367	7	ISM	ENSMUSG00000021144.15	ENSMUST00000069690.5	2697	20	33225	-33	33225	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	113095167	113100826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
ENSMUSG00000021149.9_9022080_9024273_1	chr13	-	1305	2	ISM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	21846	5713	21846	-5713	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAGTCATGTAACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	9024273	9022079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_9023311_9024199
ENSMUSG00000021149.9_9022209_9025039_1	chr13	-	1305	3	ISM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	21080	5842	21080	-5842	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATTGGCTTTCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	9025039	9022208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_9023311_9024199_9024344_9024980
ENSMUSG00000021149.9_9022359_9027425_1	chr13	-	1316	4	ISM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	18694	5992	18694	-5992	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGCCCTGTCCTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	9027425	9022358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271
ENSMUSG00000021149.9_9022516_9029981_1	chr13	-	1400	7	ISM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	16138	6149	16138	-6149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	9029981	9022515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937
ENSMUSG00000021149.9_9023044_9037950_1	chr13	-	1332	11	ISM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	8169	6677	8169	-6677	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAATGCTTGCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	9037950	9023043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791
ENSMUSG00000021149.9_9023163_9039151_1	chr13	-	1309	12	ISM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	6968	6796	6968	-6796	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATGTCCTCTTCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	9039151	9023162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088
ENSMUSG00000021149.9_9027331_9042723_1	chr13	-	1307	13	ISM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	3396	10964	3396	-10964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTACAGTCCAAAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	9042723	9027330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680
ENSMUSG00000021149.9_9027396_9042792_1	chr13	-	1311	13	ISM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	3327	11029	3327	-11029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACGAGGAAATGATGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	9042792	9027395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680
ENSMUSG00000021149.9_9028596_9046086_1	chr13	-	1366	13	ISM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	33	12229	33	-12229	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGATTATATTGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	9046086	9028595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
ENSMUSG00000021156.18_9743511_9785454_1	chr13	-	876	9	ISM	ENSMUSG00000021156.18	ENST00000397962.8	1845	15	29759	6613	-14490	-6613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAATCAAGTGGATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	9785454	9743510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367
ENSMUSG00000021175.16_117807250_117836080_1	chr12	+	969	4	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	0	-4697	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGCCGAGGATGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	117807249	117836080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818
ENSMUSG00000021175.16_117807358_117836133_1	chr12	+	914	4	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	108	-4644	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAAGGGCCATGAACAT	NA	NA	NA	NA	NA	NA	NA	NA	117807357	117836133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818
ENSMUSG00000021175.16_117807451_117837527_1	chr12	+	935	5	ISM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	201	4914	201	-3250	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAAACTCTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	117807450	117837527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455
ENSMUSG00000021175.16_117807623_117837801_1	chr12	+	934	6	ISM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	373	4640	373	-2976	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTACTGACTAATAAGC	NA	NA	NA	NA	NA	NA	NA	NA	117807622	117837801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630
ENSMUSG00000021175.16_117828765_117840714_1	chr12	+	1079	7	FSM	ENSMUSG00000021175.16	ENST00000373934.4	1145	7	3	63	3	-63	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTCTCATTCATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	117828764	117840714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_117828900_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640
ENSMUSG00000021175.16_117828881_117839377_1	chr12	+	939	7	ISM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	21631	3064	119	-1400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTGTGCGGGGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	117828880	117839377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309
ENSMUSG00000021175.16_117835957_117841237_1	chr12	+	905	7	ISM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	28707	1204	7195	460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGATCGCTCGAACTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	117835956	117841237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ENSMUSG00000021175.16_117835989_117841308_1	chr12	+	944	7	ISM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	28739	1133	7227	531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCTAGAATTTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	117835988	117841308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ENSMUSG00000021175.16_117836045_117841389_1	chr12	+	969	7	ISM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	28795	1052	7283	612	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAGCAGAGAAATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	117836044	117841389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ENSMUSG00000021175.16_117837680_117841581_1	chr12	+	912	5	ISM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	30430	860	8918	804	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGCCTCCTGAGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	117837679	117841581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ENSMUSG00000021175.16_117837729_117841657_1	chr12	+	939	5	ISM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	30479	784	8967	-784	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTATATTGAAGAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	117837728	117841657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ENSMUSG00000021175.16_117838514_117841812_1	chr12	+	926	4	ISM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	31264	629	9752	-629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATTTTTTTAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	117838513	117841812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_117838542_117839309_117839460_117840640_117840778_117841201
ENSMUSG00000021175.16_117839400_117841926_1	chr12	+	922	3	ISM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	32150	515	10638	-515	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGCTAAAATCAATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	117839399	117841926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_117839460_117840640_117840778_117841201
ENSMUSG00000021175.16_117840705_117842048_1	chr12	+	920	2	ISM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	33455	393	11943	-393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACATCCTTGCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	117840704	117842048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_117840778_117841201
ENSMUSG00000021175.16_117840762_117842098_1	chr12	+	913	2	ISM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	33512	343	12000	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGGCCGTTCATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	117840761	117842098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_117840778_117841201
ENSMUSG00000021177.17_99857432_99921478_1	chr12	+	2018	15	NNC	ENSMUSG00000021177.17	novel	2019	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACAGGCCTGGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	99857431	99921478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868612_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ENSMUSG00000021177.17_99857432_99921478_3	chr12	+	2001	14	NNC	ENSMUSG00000021177.17	novel	2019	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACAGGCCTGGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	99857431	99921478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_99858005_99859876_99859921_99860968_99861025_99864522_99864632_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ENSMUSG00000021177.17_99857432_99921478_4	chr12	+	2014	15	NNC	ENSMUSG00000021177.17	novel	2019	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACAGGCCTGGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	99857431	99921478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877863_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ENSMUSG00000021178.10_100076413_100089664_1	chr12	+	1585	11	NNC	ENSMUSG00000021178.10	novel	1591	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	9257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGGAAGAGTTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	100076412	100089664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_100076471_100078589_100078644_100079320_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ENSMUSG00000021178.10_100076413_100089664_2	chr12	+	1583	11	NNC	ENSMUSG00000021178.10	novel	1591	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGGAAGAGTTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	100076412	100089664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_100076471_100078597_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ENSMUSG00000021178.10_100076413_100089664_3	chr12	+	1583	11	NNC	ENSMUSG00000021178.10	novel	1591	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGGAAGAGTTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	100076412	100089664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081686_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ENSMUSG00000021178.10_100079312_100089426_1	chr12	+	1249	9	FSM	ENSMUSG00000021178.10	ENST00000536820.1	1249	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCTGAGGGGCTCTATC	NA	NA	NA	NA	NA	NA	NA	NA	100079311	100089426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_100079412_100081096_100081222_100081678_100081865_100082045_100082180_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ENSMUSG00000021179.9_100091929_100095600_1	chr12	-	181	3	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	21995	72	21995	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGAGAAGGAGCTCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	100095600	100091928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_100091991_100092459_100092532_100095553
ENSMUSG00000021179.9_100095589_100096700_1	chr12	-	188	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	20895	3732	20895	-3732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCTACTGTGGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	100096700	100095588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_100095693_100096616
ENSMUSG00000021179.9_100095647_100096744_1	chr12	-	174	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	20851	3790	20851	-3790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCATCGCATCAGAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	100096744	100095646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_100095693_100096616
ENSMUSG00000021179.9_100097469_100098501_1	chr12	-	166	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	19094	5612	19094	-5612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCTCAAGGAGCCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	100098501	100097468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_100097543_100098409
ENSMUSG00000021179.9_100098634_100100640_1	chr12	-	192	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	16955	6777	16955	-6777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAACTTTATGATGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	100100640	100098633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_100098797_100100611
ENSMUSG00000021179.9_100098708_100100682_1	chr12	-	160	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	16913	6851	16913	-6851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGTGCCTTCCGGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	100100682	100098707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_100098797_100100611
ENSMUSG00000021179.9_100098761_100100736_1	chr12	-	161	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	16859	6904	16859	-6904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCAGCCCAGACCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	100100736	100098760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_100098797_100100611
ENSMUSG00000021179.9_100100663_100103939_1	chr12	-	152	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	13656	8806	13656	-8806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACCAAGAAGCAAACGGAG	NA	NA	NA	NA	NA	NA	NA	NA	100103939	100100662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_100100792_100103916
ENSMUSG00000021179.9_100100770_100104039_1	chr12	-	145	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	13556	8913	13556	-8913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGGAGGACCAGGAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	100104039	100100769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_100100792_100103916
ENSMUSG00000021179.9_100106274_100108184_1	chr12	-	157	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	9411	14417	9411	-14417	internal_fragment	TRUE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTACAGGTATGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	100108184	100106273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_100106398_100108151
ENSMUSG00000021179.9_100106323_100108238_1	chr12	-	162	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	9357	14466	9357	-14466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGACTTCACCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	100108238	100106322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_100106398_100108151
ENSMUSG00000021179.9_100112144_100116101_1	chr12	-	170	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	1494	20287	1494	-20287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGATATAGCAAGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	100116101	100112143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_100112288_100116075
ENSMUSG00000021179.9_100112191_100116157_1	chr12	-	179	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	1438	20334	1438	-20334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGAAGCCAGATCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	100116157	100112190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_100112288_100116075
ENSMUSG00000021179.9_100116213_100117551_1	chr12	-	164	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	44	24356	44	-24356	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCATCAGCACCACAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	100117551	100116212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_100116310_100117484
ENSMUSG00000021185.17_100745395_100823315_1	chr12	+	1624	10	ISM	ENSMUSG00000021185.17	ENSMUST00000069782.11	3295	13	79	15554	41	-15292	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATCAACTGGTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	100745394	100823315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_100745570_100795857_100795985_100801443_100801595_100804758_100804958_100807629_100807781_100808901_100809025_100810988_100811190_100816371_100816633_100819472_100819573_100823179
ENSMUSG00000021185.17_100745521_100825840_1	chr12	+	1560	11	ISM	ENSMUSG00000021185.17	ENSMUST00000069782.11	3295	13	205	13029	167	-12767	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTGAAGAAGCACATTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	100745520	100825840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_100745570_100795857_100795985_100801443_100801595_100804758_100804958_100807629_100807781_100808901_100809025_100810988_100811190_100816371_100816633_100819472_100819573_100823179_100823329_100825791
ENSMUSG00000021185.17_100801513_100837610_1	chr12	+	1586	11	ISM	ENSMUSG00000021185.17	ENSMUST00000167322.2	2941	14	49112	997	49112	-997	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGGCATCGTGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	100801512	100837610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_100801595_100804758_100804958_100807629_100807781_100808901_100809025_100810988_100811190_100816371_100816633_100819472_100819573_100823179_100823329_100825791_100825912_100833362_100833515_100837562
ENSMUSG00000021185.17_100811112_100838259_1	chr12	+	1557	7	ISM	ENSMUSG00000021185.17	ENSMUST00000167322.2	2941	14	58711	348	58711	-348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCCTGACTCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	100811111	100838259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_100811190_100816371_100816633_100819472_100819573_100823179_100823329_100825791_100825912_100833362_100833515_100837562
ENSMUSG00000021185.17_100811146_100838349_1	chr12	+	1613	7	ISM	ENSMUSG00000021185.17	ENSMUST00000167322.2	2941	14	58745	258	58745	-258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGATGAGCTCGCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	100811145	100838349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_100811190_100816371_100816633_100819472_100819573_100823179_100823329_100825791_100825912_100833362_100833515_100837562
ENSMUSG00000021185.17_100819549_100838727_1	chr12	+	1610	5	ISM	ENSMUSG00000021185.17	ENSMUST00000167322.2	2941	14	67148	-120	67148	114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCCTCCACCCAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	100819548	100838727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_100819573_100823179_100823329_100825791_100825912_100833362_100833515_100837562
ENSMUSG00000021185.17_100823296_100838869_1	chr12	+	1612	4	ISM	ENSMUSG00000021185.17	ENSMUST00000167322.2	2941	14	70895	-262	70895	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATAGATGACT	NA	NA	NA	NA	NA	NA	NA	NA	100823295	100838869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_100823329_100825791_100825912_100833362_100833515_100837562
ENSMUSG00000021189.12_101889038_101903730_1	chr12	-	935	5	NIC	ENSMUSG00000021189.12	novel	1132	8	NA	NA	10968	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCATTGGGGGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	101903730	101889037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr12_-_101889464_101892742_101892841_101899214_101899324_101900506_101900674_101903595
ENSMUSG00000021189.12_101889169_101924502_1	chr12	-	1318	10	NIC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	0	2	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTAAATGTCCCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	101924502	101889168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr12_-_101889464_101892742_101892841_101899214_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914533_101914699_101924392
ENSMUSG00000021189.12_101889340_101914698_1	chr12	-	1121	9	NNC	ENSMUSG00000021189.12	novel	1092	9	NA	NA	0	30	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTGTAACATTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	101914698	101889339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_101889461_101892742_101892864_101899214_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912093_101912244_101914533
ENSMUSG00000021189.12_101889340_101914698_2	chr12	-	1122	9	FSM	ENSMUSG00000021189.12	ENST00000523800.1	1092	9	0	-30	0	30	multi-exon	FALSE	canonical	NA	NA	NA	NA	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTGTAACATTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	101914698	101889339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_101889461_101892742_101892864_101899214_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912244_101914533
ENSMUSG00000021189.12_101889340_101914698_3	chr12	-	1118	9	NIC	ENSMUSG00000021189.12	novel	1092	9	NA	NA	0	30	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTGTAACATTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	101914698	101889339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr12_-_101889461_101892742_101892864_101899218_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912244_101914533
ENSMUSG00000021189.12_101889340_101914698_4	chr12	-	1120	9	NNC	ENSMUSG00000021189.12	novel	1092	9	NA	NA	0	30	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTGTAACATTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	101914698	101889339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_101889461_101892742_101892864_101899214_101899324_101900506_101900674_101903597_101903729_101908375_101908464_101911658_101911726_101912092_101912244_101914533
ENSMUSG00000021189.12_101889340_101924425_1	chr12	-	819	8	NIC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	13	30	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTGTAACATTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	101924425	101889339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr12_-_101889464_101892742_101892841_101899214_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101924392
ENSMUSG00000021190.15_102360357_102362073_1	chr12	-	754	3	ISM	ENSMUSG00000021190.15	ENSMUST00000110020.8	1835	13	27955	14	27955	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTTTCTGGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	102362073	102360356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_102360872_102361100_102361169_102361902
ENSMUSG00000021190.15_102360521_102364642_1	chr12	-	791	4	ISM	ENSMUSG00000021190.15	ENSMUST00000110020.8	1835	13	25386	178	25386	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAAAGCTGAAACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	102364642	102360520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441
ENSMUSG00000021190.15_102360521_102368991_1	chr12	-	1130	8	ISM	ENSMUSG00000021190.15	ENSMUST00000110020.8	1835	13	21037	178	21037	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	996	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAAAGCTGAAACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	102368991	102360520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928
ENSMUSG00000021190.15_102360678_102369761_1	chr12	-	1049	9	ISM	ENSMUSG00000021190.15	ENSMUST00000110020.8	1835	13	20267	335	20267	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGAAGCCAGTTTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	102369761	102360677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685
ENSMUSG00000021190.15_102360794_102368190_1	chr12	-	774	7	ISM	ENSMUSG00000021190.15	ENSMUST00000110020.8	1835	13	21838	451	21838	-437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATATGAACCAACCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	102368190	102360793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143
ENSMUSG00000021190.15_102361100_102368991_1	chr12	-	780	7	ISM	ENSMUSG00000021190.15	ENSMUST00000110020.8	1835	13	21037	757	21037	-743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCAGCGCTTGGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	102368991	102361099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928
ENSMUSG00000021190.15_102361979_102370604_1	chr12	-	797	8	ISM	ENSMUSG00000021190.15	ENSMUST00000110020.8	1835	13	19424	1636	19424	-1622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACAGCACATGACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	102370604	102361978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518
ENSMUSG00000021190.15_102364441_102372136_1	chr12	-	785	8	ISM	ENSMUSG00000021190.15	ENSMUST00000110020.8	1835	13	17892	4098	17892	-4084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTAGTGGCTTACTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	102372136	102364440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054
ENSMUSG00000021190.15_102364617_102389899_1	chr12	-	763	10	ISM	ENSMUSG00000021190.15	ENSMUST00000110020.8	1835	13	129	4274	129	-4260	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCAGGGAATGAAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	102389899	102364616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843
ENSMUSG00000021190.15_102366164_102390028_1	chr12	-	866	9	ISM	ENSMUSG00000021190.15	ENSMUST00000110020.8	1835	13	0	5821	0	-5807	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGGGGCCTCGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	102390028	102366163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843
ENSMUSG00000021190.15_102366361_102405905_1	chr12	-	814	9	ISM	ENSMUSG00000021190.15	ENSMUST00000021607.9	1990	14	167	6004	167	-6004	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGCCCTCAGGCTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	102405905	102366360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843_102390015_102405889
ENSMUSG00000021190.15_102366497_102406072_1	chr12	-	845	9	ISM	ENSMUSG00000021190.15	ENSMUST00000021607.9	1990	14	0	6140	0	-6140	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCCCAAGGAGTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	102406072	102366496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843_102390015_102405889
ENSMUSG00000021192.17_102435451_102440874_1	chr12	+	810	3	ISM	ENSMUSG00000021192.17	ENSMUST00000179218.9	2827	13	57	23290	0	-23290	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGCGAGGAGCACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	102435450	102440874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_102435623_102438256_102438825_102440804
ENSMUSG00000021193.11_6598210_6630197_1	chr13	+	3529	27	FSM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	23	354	23	119	multi-exon	FALSE	canonical	NA	NA	NA	NA	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGCTAAATCAAAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	6598209	6630197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021193.11_6599701_6630303_1	chr13	+	3494	26	ISM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	1514	248	1514	225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGATGTCCTCTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	6599700	6630303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021193.11_6602667_6629776_1	chr13	+	2742	22	FSM	ENSMUSG00000021193.11	ENST00000678436.1	2738	22	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAGTGCCACATATCTT	NA	NA	NA	NA	NA	NA	NA	NA	6602666	6629776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6619235_6619402_6620637_6620739_6623076_6623258_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021193.11_6602718_6629776_1	chr13	+	2685	22	NNC	ENSMUSG00000021193.11	novel	2738	22	NA	NA	51	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1014	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAGTGCCACATATCTT	NA	NA	NA	NA	NA	NA	NA	NA	6602717	6629776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6619235_6619402_6620643_6620739_6623076_6623258_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021193.11_6602718_6629776_2	chr13	+	2691	22	FSM	ENSMUSG00000021193.11	ENST00000678436.1	2738	22	51	-4	51	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAGTGCCACATATCTT	NA	NA	NA	NA	NA	NA	NA	NA	6602717	6629776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6619235_6619402_6620637_6620739_6623076_6623258_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021193.11_6602718_6629776_3	chr13	+	2686	22	NNC	ENSMUSG00000021193.11	novel	2738	22	NA	NA	51	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAGTGCCACATATCTT	NA	NA	NA	NA	NA	NA	NA	NA	6602717	6629776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610642_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6619235_6619402_6620637_6620739_6623076_6623258_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021193.11_6602742_6630410_1	chr13	+	3511	25	ISM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	4555	141	75	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAATAAATACAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	6602741	6630410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021193.11_6603263_6630551_1	chr13	+	3572	24	ISM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	5076	0	596	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGTTGTTACCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	6603262	6630551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021193.11_6610065_6618825_1	chr13	+	862	7	ISM	ENSMUSG00000021193.11	ENST00000380989.6	2940	24	7398	10947	7398	-10947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCTTCATGCTCCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	6610064	6618825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699
ENSMUSG00000021193.11_6613410_6620738_1	chr13	+	856	7	ISM	ENSMUSG00000021193.11	ENSMUST00000021611.10	3318	26	15225	9340	10743	-9034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGTGTCCCGCCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	6613409	6620738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637
ENSMUSG00000021193.11_6617383_6625165_1	chr13	+	895	7	NIC	ENSMUSG00000021193.11	novel	2814	23	NA	NA	14716	-4607	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAAAGGGGGCGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	6617382	6625165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr13_+_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623258_6625052
ENSMUSG00000021193.11_6618700_6627552_1	chr13	+	886	7	NIC	ENSMUSG00000021193.11	novel	2940	24	NA	NA	16033	-2220	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTCTGAGTCATCATG	NA	NA	NA	NA	NA	NA	NA	NA	6618699	6627552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr13_+_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623258_6625052_6625166_6627425
ENSMUSG00000021193.11_6618973_6628553_1	chr13	+	803	7	ISM	ENSMUSG00000021193.11	ENST00000380989.6	2940	24	16306	1219	16306	-1219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACATTGATGAAGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	6618972	6628553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_6619012_6619235_6619402_6620637_6620739_6623076_6623258_6625052_6625166_6627425_6627552_6628476
ENSMUSG00000021193.11_6620630_6629776_1	chr13	+	743	6	ISM	ENSMUSG00000021193.11	ENST00000678441.1	2814	23	17963	-4	17963	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAGTGCCACATATCTT	NA	NA	NA	NA	NA	NA	NA	NA	6620629	6629776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_6620739_6623076_6623258_6625052_6625166_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021196.15_6629804_6638689_1	chr13	-	2367	6	ISM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	60124	0	60072	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTCAAAGATATGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	6638689	6629803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524
ENSMUSG00000021196.15_6629914_6647956_1	chr13	-	2319	7	ISM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	50857	110	50805	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATATGGCTAACTGATT	NA	NA	NA	NA	NA	NA	NA	NA	6647956	6629913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894
ENSMUSG00000021196.15_6630180_6652847_1	chr13	-	2402	10	ISM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	45966	376	45914	-376	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATTTAGATTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	6652847	6630179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748
ENSMUSG00000021196.15_6630236_6652847_1	chr13	-	2346	10	ISM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	45966	432	45914	-432	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGCAAGAGCAGCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	6652847	6630235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748
ENSMUSG00000021196.15_6630376_6653450_1	chr13	-	2340	12	ISM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	45363	572	45311	-572	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCTACATGCATGTC	NA	NA	NA	NA	NA	NA	NA	NA	6653450	6630375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434
ENSMUSG00000021196.15_6630616_6655731_1	chr13	-	2335	14	ISM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	43082	812	43030	602	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGCTCAGTTTTCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	6655731	6630615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671
ENSMUSG00000021196.15_6630856_6670957_1	chr13	-	2414	18	ISM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	27856	1052	27804	362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTCACTGTTTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	6670957	6630855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921
ENSMUSG00000021196.15_6630952_6671004_1	chr13	-	2365	18	ISM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	27809	1148	27757	266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATACAGCACAGCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	6671004	6630951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921
ENSMUSG00000021196.15_6631063_6672088_1	chr13	-	2483	19	ISM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	26725	1259	26673	155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCCGCCTACTTCACTAC	NA	NA	NA	NA	NA	NA	NA	NA	6672088	6631062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942
ENSMUSG00000021196.15_6631504_6698761_1	chr13	-	2393	22	FSM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	52	1700	0	-286	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATGAGCCATCTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	6698761	6631503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ENSMUSG00000021198.17_102957667_103041085_1	chr12	+	2196	17	ISM	ENSMUSG00000021198.17	ENST00000393151.6	7908	50	41854	108787	58	-108787	internal_fragment	TRUE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGAGTCCGTTCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	102957666	103041085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_102957730_102964696_102965002_102968064_102968236_102977458_102977552_102987265_102987322_102988005_102988136_103008373_103008439_103013214_103013304_103013916_103013958_103016153_103016183_103025577_103025808_103027603_103027776_103029363_103029595_103036276_103036468_103037000_103037125_103038918_103039060_103041020
ENSMUSG00000021198.17_102964825_103045123_1	chr12	+	2186	17	ISM	ENSMUSG00000021198.17	ENST00000256339.8	8115	49	7216	105137	-3323	-104749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATGGGTTTAGAGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	102964824	103045123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_102965002_102968064_102968236_102977458_102977552_102987265_102987322_102988005_102988136_103008373_103008439_103013214_103013304_103013916_103013958_103016153_103016183_103025577_103025808_103027603_103027776_103029363_103029595_103036276_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099
ENSMUSG00000021198.17_102964890_103045178_1	chr12	+	2176	17	ISM	ENSMUSG00000021198.17	ENST00000256339.8	8115	49	7281	105082	-3258	-104694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCAGGCCCCCTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	102964889	103045178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_102965002_102968064_102968236_102977458_102977552_102987265_102987322_102988005_102988136_103008373_103008439_103013214_103013304_103013916_103013958_103016153_103016183_103025577_103025808_103027603_103027776_103029363_103029595_103036276_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099
ENSMUSG00000021198.17_102964933_103045246_1	chr12	+	2201	17	ISM	ENSMUSG00000021198.17	ENST00000256339.8	8115	49	7324	105014	-3215	-104626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTCTAGCATCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	102964932	103045246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_102965002_102968064_102968236_102977458_102977552_102987265_102987322_102988005_102988136_103008373_103008439_103013214_103013304_103013916_103013958_103016153_103016183_103025577_103025808_103027603_103027776_103029363_103029595_103036276_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099
ENSMUSG00000021198.17_102988006_103055030_1	chr12	+	2264	16	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	19858	95227	19858	-94842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGACTGTGAACATCTT	NA	NA	NA	NA	NA	NA	NA	NA	102988005	103055030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_102988136_103008373_103008439_103013214_103013304_103013916_103013958_103016153_103016183_103025577_103025808_103027603_103027776_103029363_103029595_103036276_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881
ENSMUSG00000021198.17_103025652_103060470_1	chr12	+	2196	14	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	57504	89787	57504	-89402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGTTCGACACTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	103025651	103060470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103025808_103027603_103027776_103029363_103029595_103036276_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450
ENSMUSG00000021198.17_103025709_103060517_1	chr12	+	2186	14	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	57561	89740	57561	-89355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTACTCTTGCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	103025708	103060517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103025808_103027603_103027776_103029363_103029595_103036276_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450
ENSMUSG00000021198.17_103025762_103060578_1	chr12	+	2194	14	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	57614	89679	57614	-89294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGATTTGAGACACTTT	NA	NA	NA	NA	NA	NA	NA	NA	103025761	103060578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103025808_103027603_103027776_103029363_103029595_103036276_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450
ENSMUSG00000021198.17_103027706_103061291_1	chr12	+	2195	14	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	59558	88966	59558	-88581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAACAGACAGAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	103027705	103061291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103027776_103029363_103029595_103036276_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216
ENSMUSG00000021198.17_103027750_103061351_1	chr12	+	2211	14	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	59602	88906	59602	-88521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGAGGGCGCTCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	103027749	103061351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103027776_103029363_103029595_103036276_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216
ENSMUSG00000021198.17_103029421_103070895_1	chr12	+	2201	14	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	61273	79362	61273	-78977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAAGGACCTGCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	103029420	103070895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103029595_103036276_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867
ENSMUSG00000021198.17_103029462_103070956_1	chr12	+	2221	14	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	61314	79301	61314	-78916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGCTCATGAAGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	103029461	103070956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103029595_103036276_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867
ENSMUSG00000021198.17_103029532_103070994_1	chr12	+	2189	14	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	61384	79263	61384	-78878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGGAGTCAGATATCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	103029531	103070994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103029595_103036276_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867
ENSMUSG00000021198.17_103036276_103071154_1	chr12	+	2287	13	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	68128	79103	68128	-78718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGTAATAATGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	103036275	103071154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867
ENSMUSG00000021198.17_103036426_103074445_1	chr12	+	2208	14	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	68278	75812	68278	-75427	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCCTCAACTCCGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	103036425	103074445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374
ENSMUSG00000021198.17_103036999_103074557_1	chr12	+	2280	13	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	68851	75700	68851	-75315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGCCATGCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	103036998	103074557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103037125_103038918_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374
ENSMUSG00000021198.17_103038938_103074930_1	chr12	+	2191	13	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	70790	75327	70790	-74942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAATACACTCAATGCGC	NA	NA	NA	NA	NA	NA	NA	NA	103038937	103074930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874
ENSMUSG00000021198.17_103038988_103074981_1	chr12	+	2192	13	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	70840	75276	70840	-74891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACCGCTGTACACTGACA	NA	NA	NA	NA	NA	NA	NA	NA	103038987	103074981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874
ENSMUSG00000021198.17_103041072_103078363_1	chr12	+	2208	13	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	72924	71894	72924	-71509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGCTACGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	103041071	103078363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280
ENSMUSG00000021198.17_103041129_103078413_1	chr12	+	2201	13	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	72981	71844	72981	-71459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCCTCTTGTTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	103041128	103078413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280
ENSMUSG00000021198.17_103041186_103078462_1	chr12	+	2193	13	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	73038	71795	73038	-71410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCGATGTGACATAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	103041185	103078462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280
ENSMUSG00000021198.17_103045208_103078626_1	chr12	+	2192	12	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	77060	71631	77060	-71246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACCAGAGGTTAGGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	103045207	103078626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280
ENSMUSG00000021198.17_103045261_103078694_1	chr12	+	2207	12	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	77113	71563	77113	-71178	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTAGGGAGGATTTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	103045260	103078694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280
ENSMUSG00000021198.17_103049842_103078838_1	chr12	+	2199	11	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	81694	71419	81694	-71034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGAGATGATGAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	103049841	103078838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280
ENSMUSG00000021198.17_103054934_103079038_1	chr12	+	2210	9	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	86786	71219	86786	-70834	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTCTGGACGACCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	103054933	103079038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280
ENSMUSG00000021198.17_103054984_103079095_1	chr12	+	2217	9	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	86836	71162	86836	-70777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTGCCTCTGGCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	103054983	103079095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280
ENSMUSG00000021198.17_103058388_103079240_1	chr12	+	2200	8	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	90240	71017	90240	-70632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAACTGTGCTCCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	103058387	103079240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280
ENSMUSG00000021198.17_103058981_103079366_1	chr12	+	2191	7	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	90833	70891	90833	-70506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAATCAGAATTTAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	103058980	103079366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280
ENSMUSG00000021198.17_103059037_103079413_1	chr12	+	2182	7	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	90889	70844	90889	-70459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGATTGCCGTCAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	103059036	103079413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280
ENSMUSG00000021198.17_103060496_103088620_1	chr12	+	2217	7	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	92348	61637	92348	-61252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAATGCCACGGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	103060495	103088620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280_103079502_103088594
ENSMUSG00000021198.17_103060559_103088660_1	chr12	+	2194	7	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	92411	61597	92411	-61212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGTGCCCCTGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	103060558	103088660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280_103079502_103088594
ENSMUSG00000021198.17_103060631_103088702_1	chr12	+	2164	7	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	92483	61555	92483	-61170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGCCCCTCAGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	103060630	103088702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280_103079502_103088594
ENSMUSG00000021198.17_103061217_103091984_1	chr12	+	2259	7	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	93069	58273	93069	-57888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTCATGCTTTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	103061216	103091984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280_103079502_103088594_103088703_103091867
ENSMUSG00000021198.17_103061353_103094609_1	chr12	+	2245	8	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	93205	55648	93205	-55263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGAGTATCTCTCACGG	NA	NA	NA	NA	NA	NA	NA	NA	103061352	103094609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280_103079502_103088594_103088703_103091867_103091985_103094487
ENSMUSG00000021198.17_103070868_103097917_1	chr12	+	2266	8	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	102720	52340	102720	-51955	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTCACCCATTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	103070867	103097917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103071155_103074374_103074558_103074874_103075038_103078280_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814
ENSMUSG00000021198.17_103070985_103100712_1	chr12	+	2198	9	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	102837	49545	102837	-49160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTAGCCATCGTGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	103070984	103100712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103071155_103074374_103074558_103074874_103075038_103078280_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663
ENSMUSG00000021198.17_103074375_103108143_1	chr12	+	2272	10	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	106227	42114	106227	-41729	internal_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTCATCCCCCCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	103074374	103108143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103074558_103074874_103075038_103078280_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030
ENSMUSG00000021198.17_103074486_103108272_1	chr12	+	2196	11	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	106338	41985	106338	-41600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGACTTCAACGAGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	103074485	103108272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103074558_103074874_103075038_103078280_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030_103108144_103108237
ENSMUSG00000021198.17_103074940_103108923_1	chr12	+	2188	11	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	106792	41334	106792	-40949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCCCATGGATTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	103074939	103108923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103075038_103078280_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030_103108144_103108237_103108324_103108845
ENSMUSG00000021198.17_103078450_103122758_1	chr12	+	2241	13	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	110302	27499	110302	-27114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACAGGCCCTGAAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	103078449	103122758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030_103108144_103108237_103108324_103108845_103109020_103112560_103112630_103115229_103115341_103122714
ENSMUSG00000021198.17_103078507_103122806_1	chr12	+	2232	13	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	110359	27451	110359	-27066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTCCAGGTAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	103078506	103122806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030_103108144_103108237_103108324_103108845_103109020_103112560_103112630_103115229_103115341_103122714
ENSMUSG00000021198.17_103078757_103134588_1	chr12	+	2218	16	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	110609	15669	110609	-15284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTTGGCCTAGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	103078756	103134588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030_103108144_103108237_103108324_103108845_103109020_103112560_103112630_103115229_103115341_103122714_103122820_103128071_103128150_103131888_103131979_103134533
ENSMUSG00000021198.17_103078816_103134643_1	chr12	+	2214	16	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	110668	15614	110668	-15229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAACAAAGCCGTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	103078815	103134643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030_103108144_103108237_103108324_103108845_103109020_103112560_103112630_103115229_103115341_103122714_103122820_103128071_103128150_103131888_103131979_103134533
ENSMUSG00000021198.17_103078963_103135877_1	chr12	+	2185	17	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	110815	14380	110815	-13995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGGATCCCTCACGCA	NA	NA	NA	NA	NA	NA	NA	NA	103078962	103135877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030_103108144_103108237_103108324_103108845_103109020_103112560_103112630_103115229_103115341_103122714_103122820_103128071_103128150_103131888_103131979_103134533_103134710_103135825
ENSMUSG00000021198.17_103079011_103135938_1	chr12	+	2198	17	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	110863	14319	110863	-13934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCTGGATGCAGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	103079010	103135938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030_103108144_103108237_103108324_103108845_103109020_103112560_103112630_103115229_103115341_103122714_103122820_103128071_103128150_103131888_103131979_103134533_103134710_103135825
ENSMUSG00000021198.17_103079075_103135992_1	chr12	+	2188	17	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	110927	14265	110927	-13880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTCCAGAGCAATCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	103079074	103135992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030_103108144_103108237_103108324_103108845_103109020_103112560_103112630_103115229_103115341_103122714_103122820_103128071_103128150_103131888_103131979_103134533_103134710_103135825
ENSMUSG00000021198.17_103079189_103137919_1	chr12	+	2183	18	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	111041	12338	111041	-11953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGTCCAAAATCAGAACG	NA	NA	NA	NA	NA	NA	NA	NA	103079188	103137919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030_103108144_103108237_103108324_103108845_103109020_103112560_103112630_103115229_103115341_103122714_103122820_103128071_103128150_103131888_103131979_103134533_103134710_103135825_103136013_103137830
ENSMUSG00000021198.17_103079243_103137968_1	chr12	+	2178	18	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	111095	12289	111095	-11904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAATTCTGGAGCAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	103079242	103137968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030_103108144_103108237_103108324_103108845_103109020_103112560_103112630_103115229_103115341_103122714_103122820_103128071_103128150_103131888_103131979_103134533_103134710_103135825_103136013_103137830
ENSMUSG00000021198.17_103079435_103149713_1	chr12	+	2208	21	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	111287	544	111287	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAACGTGAACCACCACAG	NA	NA	NA	NA	NA	NA	NA	NA	103079434	103149713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030_103108144_103108237_103108324_103108845_103109020_103112560_103112630_103115229_103115341_103122714_103122820_103128071_103128150_103131888_103131979_103134533_103134710_103135825_103136013_103137830_103138029_103139711_103139790_103148421_103148464_103149671
ENSMUSG00000021198.17_103088615_103149872_1	chr12	+	2280	20	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	120467	385	120467	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACTCCTCGGCTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	103088614	103149872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030_103108144_103108237_103108324_103108845_103109020_103112560_103112630_103115229_103115341_103122714_103122820_103128071_103128150_103131888_103131979_103134533_103134710_103135825_103136013_103137830_103138029_103139711_103139790_103148421_103148464_103149671
ENSMUSG00000021200.15_103291466_103299711_1	chr12	-	741	3	ISM	ENSMUSG00000021200.15	ENSMUST00000149431.2	2283	8	4921	4061	4921	-4061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTGTCGTTACTCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	103299711	103291465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_103291874_103296603_103296776_103299550
ENSMUSG00000021209.13_103498829_103539686_1	chr12	+	571	5	NNC	ENSMUSG00000021209.13	novel	658	5	NA	NA	80	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTTGTTTCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	103498828	103539686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_103499002_103500329_103500404_103524626_103524730_103539343_103539420_103539541
ENSMUSG00000021209.13_103498829_103539686_2	chr12	+	569	5	NNC	ENSMUSG00000021209.13	novel	658	5	NA	NA	80	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTTGTTTCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	103498828	103539686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_103499002_103500329_103500404_103524626_103524730_103539352_103539420_103539534
ENSMUSG00000021209.13_103498829_103539686_3	chr12	+	578	5	FSM	ENSMUSG00000021209.13	ENST00000328839.3	658	5	80	0	80	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTTGTTTCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	103498828	103539686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_103499002_103500329_103500404_103524626_103524730_103539343_103539420_103539534
ENSMUSG00000021210.17_4486277_4499314_1	chr13	+	601	6	ISM	ENSMUSG00000021210.17	ENSMUST00000021630.15	1396	9	1972	8215	0	-166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCAGAGCTCTCCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	4486276	4499314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_4486447_4488488_4488606_4496350_4496429_4497006_4497130_4498983_4499094_4499311
ENSMUSG00000021210.17_4486277_4499481_1	chr13	+	690	5	FSM	ENSMUSG00000021210.17	ENST00000421196.7	689	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGCTGCAGGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	4486276	4499481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_4486447_4488488_4488606_4497006_4497134_4498987_4499094_4499311
ENSMUSG00000021210.17_4486334_4499477_1	chr13	+	707	6	ISM	ENSMUSG00000021210.17	ENSMUST00000021630.15	1396	9	2029	8052	57	-3	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGAGTTGCTGCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	4486333	4499477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_4486447_4488488_4488606_4496350_4496429_4497006_4497130_4498983_4499094_4499311
ENSMUSG00000021210.17_4486334_4499481_1	chr13	+	704	6	NNC	ENSMUSG00000021210.17	novel	767	6	NA	NA	57	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGCTGCAGGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	4486333	4499481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_4486447_4488488_4488606_4496357_4496429_4497006_4497134_4498987_4499094_4499311
ENSMUSG00000021215.16_3933145_3934867_1	chr13	-	1394	2	ISM	ENSMUSG00000021215.16	ENSMUST00000099946.6	3871	10	8711	1127	8566	188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGAAAGGAACCACAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	3934867	3933144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_3934474_3934802
ENSMUSG00000021215.16_3933333_3936218_1	chr13	-	1499	3	ISM	ENSMUSG00000021215.16	ENSMUST00000099946.6	3871	10	7360	1315	7215	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTTCCTCCTAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	3936218	3933332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_3934474_3934802_3934990_3936047
ENSMUSG00000021215.16_3933605_3936795_1	chr13	-	1485	4	ISM	ENSMUSG00000021215.16	ENSMUST00000099946.6	3871	10	6783	1587	6638	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACCTACGATCCGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	3936795	3933604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537
ENSMUSG00000021215.16_3933727_3937439_1	chr13	-	1432	5	ISM	ENSMUSG00000021215.16	ENSMUST00000099946.6	3871	10	6139	1709	5994	-394	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGGTTCCCCATGACT	NA	NA	NA	NA	NA	NA	NA	NA	3937439	3933726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370
ENSMUSG00000021215.16_3934082_3938888_1	chr13	-	1431	9	ISM	ENSMUSG00000021215.16	ENSMUST00000099946.6	3871	10	4690	2064	4545	-749	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGTGTAAAGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	3938888	3934081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870
ENSMUSG00000021215.16_3934154_3938934_1	chr13	-	1405	9	ISM	ENSMUSG00000021215.16	ENSMUST00000099946.6	3871	10	4644	2136	4499	-821	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCACAGCGGCCTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	3938934	3934153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870
ENSMUSG00000021215.16_3934275_3943433_1	chr13	-	1469	10	FSM	ENSMUSG00000021215.16	ENSMUST00000099946.6	3871	10	145	2257	0	-942	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGGAACCTCAGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	3943433	3934274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3943292
ENSMUSG00000021215.16_3934401_3943543_1	chr13	-	1453	10	FSM	ENSMUSG00000021215.16	ENSMUST00000099946.6	3871	10	35	2383	35	-1068	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCATAAGCAGCAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	3943543	3934400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3943292
ENSMUSG00000021216.8_3978095_3983615_1	chr13	+	1385	3	ISM	ENSMUSG00000021216.8	ENSMUST00000021639.8	3096	4	3400	1662	7	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATATCTAATGAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	3978094	3983615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_3978333_3980536_3980686_3982617
ENSMUSG00000021218.11_3588148_3607044_1	chr13	+	857	6	ISM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	85	10827	18	-8150	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGATTTGCAAGGTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	3588147	3607044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925
ENSMUSG00000021218.11_3588278_3610046_1	chr13	+	795	7	ISM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	215	7825	0	-5148	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTGCAAAATGGAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	3588277	3610046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991
ENSMUSG00000021218.11_3588310_3610034_1	chr13	+	616	6	ISM	ENSMUSG00000021218.11	ENST00000380181.7	1276	10	32	5160	32	-5160	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAAGAAATCATTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	3588309	3610034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_3588344_3598862_3598971_3600988_3601089_3606313_3606513_3606925_3607058_3609991
ENSMUSG00000021218.11_3604411_3614684_1	chr13	+	884	6	ISM	ENSMUSG00000021218.11	ENSMUST00000059515.8	2077	10	16281	1136	16133	-510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATTGTGCTTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	3604410	3614684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539
ENSMUSG00000021218.11_3606352_3615017_1	chr13	+	787	7	ISM	ENSMUSG00000021218.11	ENST00000380181.7	1276	10	18074	177	18074	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTACCACGCACTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	3606351	3615017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ENSMUSG00000021218.11_3606407_3615063_1	chr13	+	778	7	ISM	ENSMUSG00000021218.11	ENST00000380181.7	1276	10	18129	131	18129	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAAGAGGATGACAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	3606406	3615063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ENSMUSG00000021218.11_3606444_3615217_1	chr13	+	895	7	ISM	ENSMUSG00000021218.11	ENST00000380181.7	1276	10	18166	-23	18166	23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	918	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCCCTGCTTTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	3606443	3615217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ENSMUSG00000021218.11_3611942_3615443_1	chr13	+	744	4	ISM	ENSMUSG00000021218.11	ENST00000380181.7	1276	10	23664	-249	23664	249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGCTGGATCCATACAAT	NA	NA	NA	NA	NA	NA	NA	NA	3611941	3615443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_3612038_3614539_3614685_3614858_3614914_3614995
ENSMUSG00000021218.11_3614538_3615550_1	chr13	+	757	3	ISM	ENSMUSG00000021218.11	ENST00000380181.7	1276	10	26260	-356	26260	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCACAGCAGGGCCAATAG	NA	NA	NA	NA	NA	NA	NA	NA	3614537	3615550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_3614685_3614858_3614914_3614995
ENSMUSG00000021218.11_3614578_3615611_1	chr13	+	778	3	ISM	ENSMUSG00000021218.11	ENSMUST00000059515.8	2077	10	26448	209	26300	-209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCTACAACAGTTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	3614577	3615611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_3614685_3614858_3614914_3614995
ENSMUSG00000021218.11_3614632_3615662_1	chr13	+	775	3	ISM	ENSMUSG00000021218.11	ENSMUST00000059515.8	2077	10	26502	158	26354	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATACAGGAGCCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	3614631	3615662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_3614685_3614858_3614914_3614995
ENSMUSG00000021218.11_3614859_3615820_1	chr13	+	880	2	ISM	ENSMUSG00000021218.11	ENSMUST00000059515.8	2077	10	26729	0	26581	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGGTATTGAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	3614858	3615820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_3614914_3614995
ENSMUSG00000021219.17_83032096_83184450_1	chr12	+	1397	16	FSM	ENSMUSG00000021219.17	ENST00000404301.6	1423	16	27	-1	27	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAAGGCCCAGCCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	83032095	83184450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_83032169_83094332_83094384_83098052_83098160_83099265_83099318_83106519_83106585_83110195_83110273_83112727_83112810_83114186_83114262_83116268_83116368_83117371_83117434_83138521_83138633_83153531_83153658_83162886_83163074_83180428_83180519_83184159_83184214_83184364
ENSMUSG00000021222.10_83576755_83588331_1	chr12	+	1275	11	ISM	ENSMUSG00000021222.10	ENST00000555042.5	1296	12	6	16495	6	1	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	2314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTCCAGACAGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	83576754	83588331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584795_83586081_83586256_83586562_83586678_83588138
ENSMUSG00000021222.10_83576755_83588331_2	chr12	+	1269	11	NNC	ENSMUSG00000021222.10	novel	1296	12	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2091	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTCCAGACAGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	83576754	83588331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584789_83586081_83586256_83586562_83586678_83588138
ENSMUSG00000021222.10_83576755_83588331_3	chr12	+	1269	11	NNC	ENSMUSG00000021222.10	novel	1296	12	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1298	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTCCAGACAGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	83576754	83588331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584795_83586081_83586256_83586568_83586678_83588138
ENSMUSG00000021222.10_83576806_83584590_1	chr12	+	481	5	ISM	ENSMUSG00000021222.10	ENST00000509153.5	1115	9	57	3740	57	-3740	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCATGGCCATCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	83576805	83584590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83576909_83580640_83580785_83581633_83581684_83582673_83582754_83584486
ENSMUSG00000021222.10_83576806_83588331_1	chr12	+	1224	11	ISM	ENSMUSG00000021222.10	ENST00000555042.5	1296	12	57	16495	57	1	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTCCAGACAGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	83576805	83588331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584795_83586081_83586256_83586562_83586678_83588138
ENSMUSG00000021222.10_83576806_83588331_2	chr12	+	1218	11	NNC	ENSMUSG00000021222.10	novel	1296	12	NA	NA	57	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTCCAGACAGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	83576805	83588331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584583_83584717_83584795_83586081_83586256_83586562_83586678_83588138
ENSMUSG00000021222.10_83576864_83588165_1	chr12	+	505	5	ISM	ENSMUSG00000021222.10	ENST00000353777.7	801	6	115	16661	115	-165	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCTCCACGATGCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	83576863	83588165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83576909_83580640_83580785_83586081_83586256_83586562_83586678_83588138
ENSMUSG00000021222.10_83580666_83588270_1	chr12	+	540	4	ISM	ENSMUSG00000021222.10	ENST00000353777.7	801	6	3917	16556	3917	-60	internal_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCGCCCCAGGGCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	83580665	83588270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83580785_83586081_83586256_83586562_83586678_83588138
ENSMUSG00000021222.10_83580735_83586139_1	chr12	+	438	6	ISM	ENSMUSG00000021222.10	ENST00000509153.5	1115	9	3986	2191	3986	-2191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAAGTCAAGCCAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	83580734	83586139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081
ENSMUSG00000021222.10_83584485_83586677_1	chr12	+	491	4	ISM	ENSMUSG00000021222.10	ENST00000509153.5	1115	9	7736	1653	7736	-1653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGGGGACTGGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	83584484	83586677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83584589_83584717_83584816_83586081_83586256_83586562
ENSMUSG00000021222.10_83584752_83588209_1	chr12	+	424	4	ISM	ENSMUSG00000021222.10	ENST00000509153.5	1115	9	8003	121	8003	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCAACCTCCAAGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	83584751	83588209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83584816_83586081_83586256_83586562_83586678_83588138
ENSMUSG00000021222.10_83584798_83588286_1	chr12	+	455	4	ISM	ENSMUSG00000021222.10	ENST00000509153.5	1115	9	8049	44	8049	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATGGCCGTCCAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	83584797	83588286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83584816_83586081_83586256_83586562_83586678_83588138
ENSMUSG00000021222.10_83586611_83588483_1	chr12	+	412	2	ISM	ENSMUSG00000021222.10	ENST00000509153.5	1115	9	9862	-153	9862	153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTGGTTAAGCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	83586610	83588483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_83586678_83588138
ENSMUSG00000021224.16_83840961_83889117_1	chr12	-	3034	8	ISM	ENSMUSG00000021224.16	ENSMUST00000117217.8	3549	11	79591	153	0	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTGGCCTTACAATCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	83889117	83840960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991
ENSMUSG00000021224.16_83841131_83923572_1	chr12	-	3095	10	ISM	ENSMUSG00000021224.16	ENSMUST00000117217.8	3549	11	45136	323	-21274	-286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGAAGTTTTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	83923572	83841130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83902213_83902299_83923441
ENSMUSG00000021224.16_83841554_83847862_1	chr12	-	1748	4	ISM	ENSMUSG00000021224.16	ENSMUST00000129335.8	1962	10	41255	-659	41255	656	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGTGAGCGGGTTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	83847862	83841553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786
ENSMUSG00000021224.16_83841613_83847924_1	chr12	-	1751	4	ISM	ENSMUSG00000021224.16	ENSMUST00000129335.8	1962	10	41193	-600	41193	597	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTAGAATATTTTAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	83847924	83841612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786
ENSMUSG00000021224.16_83841686_83848011_1	chr12	-	1765	4	ISM	ENSMUSG00000021224.16	ENSMUST00000129335.8	1962	10	41106	-527	41106	524	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTGAGTTACAGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	83848011	83841685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786
ENSMUSG00000021224.16_83841833_83850622_1	chr12	-	1756	5	ISM	ENSMUSG00000021224.16	ENSMUST00000129335.8	1962	10	38495	-380	38495	377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCCCAGTCCTGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	83850622	83841832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553
ENSMUSG00000021224.16_83841921_83850705_1	chr12	-	1751	5	ISM	ENSMUSG00000021224.16	ENSMUST00000129335.8	1962	10	38412	-292	38412	289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATCTGTATTCAAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	83850705	83841920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553
ENSMUSG00000021224.16_83842036_83854960_1	chr12	-	1775	6	ISM	ENSMUSG00000021224.16	ENSMUST00000129335.8	1962	10	34157	-177	34157	174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCTGGGGAGGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	83854960	83842035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874
ENSMUSG00000021224.16_83842213_83878772_1	chr12	-	1247	6	ISM	ENSMUSG00000021224.16	ENST00000559312.5	1413	8	23465	3	10345	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTCTGTGACAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	83878772	83842212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_83842929_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695
ENSMUSG00000021224.16_83842419_83889135_1	chr12	-	1183	7	ISM	ENSMUSG00000021224.16	ENST00000559312.5	1413	8	13102	209	-18	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTCTGCAGCTTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	83889135	83842418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_83842929_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991
ENSMUSG00000021224.16_83842690_83846347_1	chr12	-	305	2	ISM	ENSMUSG00000021224.16	ENSMUST00000021647.14	1815	9	42770	477	42770	-477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGTGGTCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	83846347	83842689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_83842929_83846281
ENSMUSG00000021224.16_83842808_83850586_1	chr12	-	304	3	ISM	ENSMUSG00000021224.16	ENST00000555738.6	1530	8	51651	598	38531	-595	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCTCAGGTCTCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	83850586	83842807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_83842929_83846281_83846432_83850553
ENSMUSG00000021224.16_83842876_83850620_1	chr12	-	270	3	ISM	ENSMUSG00000021224.16	ENST00000555738.6	1530	8	51617	666	38497	-663	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACAGACGCACTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	83850620	83842875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_83842929_83846281_83846432_83850553
ENSMUSG00000021224.16_83842915_83850685_1	chr12	-	296	3	ISM	ENSMUSG00000021224.16	ENST00000555738.6	1530	8	51552	705	38432	-702	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTTCTGGTGCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	83850685	83842914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_83842929_83846281_83846432_83850553
ENSMUSG00000021224.16_83846377_83854927_1	chr12	-	313	3	ISM	ENSMUSG00000021224.16	ENST00000555738.6	1530	8	47310	4167	34190	-4164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCCTTCAGCACGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	83854927	83846376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_83846432_83850553_83850759_83854874
ENSMUSG00000021234.10_84385908_84395151_1	chr12	-	401	3	ISM	ENSMUSG00000021234.10	ENST00000555916.1	532	4	360	0	360	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGAGAAATTGCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	84395151	84385907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84386067_84393568_84393710_84395050
ENSMUSG00000021234.10_84386019_84395441_1	chr12	-	351	4	FSM	ENSMUSG00000021234.10	ENST00000555916.1	532	4	70	111	70	-111	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGAGAAGAGGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	84395441	84386018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_84386067_84393568_84393710_84395050_84395151_84395379
ENSMUSG00000021235.14_84408431_84420566_1	chr12	+	1771	13	NNC	ENSMUSG00000021235.14	novel	1776	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTCTTTTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	84408430	84420566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_84408594_84408726_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418917_84419116_84419192_84419309_84419424_84419592_84420452
ENSMUSG00000021235.14_84413709_84415449_1	chr12	+	175	2	ISM	ENSMUSG00000021235.14	ENST00000629426.2	1230	10	51	5077	51	-5077	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCCCTCACCAAACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	84413708	84415449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84413794_84415359
ENSMUSG00000021235.14_84413779_84417070_1	chr12	+	180	3	ISM	ENSMUSG00000021235.14	ENST00000629426.2	1230	10	121	3456	121	-3456	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCCTGGTGCATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	84413778	84417070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84413794_84415359_84415484_84417029
ENSMUSG00000021240.7_84649414_84658545_1	chr12	-	1604	13	ISM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	5599	-13	3676	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGGTGACATTTCACAAT	NA	NA	NA	NA	NA	NA	NA	NA	84658545	84649413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494
ENSMUSG00000021240.7_84649617_84659597_1	chr12	-	1571	15	ISM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	4547	190	2624	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCAGGGTGAGAAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	84659597	84649616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553
ENSMUSG00000021240.7_84649672_84659651_1	chr12	-	1570	15	ISM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	4493	245	2570	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTTCAGATGACGTTT	NA	NA	NA	NA	NA	NA	NA	NA	84659651	84649671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553
ENSMUSG00000021240.7_84649765_84659660_1	chr12	-	1486	15	ISM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	4484	338	2561	-338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCCTACACAGGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	84659660	84649764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553
ENSMUSG00000021240.7_84649868_84661886_1	chr12	-	1569	17	ISM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	2258	441	335	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGCAAGCATGCAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	84661886	84649867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850
ENSMUSG00000021240.7_84650151_84662161_1	chr12	-	1574	17	ISM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	1983	724	60	-724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGAGAGTGAGCTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	84662161	84650150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099
ENSMUSG00000021240.7_84651104_84664114_1	chr12	-	1582	16	ISM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	30	1677	30	-1677	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGAGCGATTCCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	84664114	84651103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
ENSMUSG00000021240.7_84655775_84662221_1	chr12	-	654	6	FSM	ENSMUSG00000021240.7	ENST00000557588.5	653	6	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCTTAGCACCCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	84662221	84655774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_84655871_84658494_84658546_84659553_84659671_84660678_84660819_84661850_84661979_84662099
ENSMUSG00000021242.10_84803266_84807667_1	chr12	-	895	2	ISM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	12259	1930	12259	-1930	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGCTTGGTTTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	84807667	84803265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84803987_84807493
ENSMUSG00000021242.10_84803538_84812158_1	chr12	-	730	3	ISM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	7768	2202	7768	-2202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGGATGGCTTCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	84812158	84803537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84803987_84807493_84807667_84812050
ENSMUSG00000021242.10_84803640_84819774_1	chr12	-	843	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	152	2304	152	-2304	multi-exon	FALSE	canonical	NA	NA	NA	NA	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGTTTGCTGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	84819774	84803639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
ENSMUSG00000021242.10_84803780_84819926_1	chr12	-	855	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	0	2444	0	-2444	multi-exon	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATGCCTTTTAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	84819926	84803779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
ENSMUSG00000021243.15_85017988_85026241_1	chr12	+	363	4	ISM	ENSMUSG00000021243.15	ENSMUST00000171040.2	731	8	233	3824	233	-3824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAGGACTTAGTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	85017987	85026241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85018057_85019763_85019836_85020864_85021014_85026168
ENSMUSG00000021243.15_85019764_85027376_1	chr12	+	382	4	ISM	ENSMUSG00000021243.15	ENSMUST00000171040.2	731	8	2009	2689	2009	-2689	internal_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCTCATCTCTTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	85019763	85027376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85019836_85020864_85021014_85026168_85026242_85027288
ENSMUSG00000021243.15_85020983_85030065_1	chr12	+	410	5	ISM	ENSMUSG00000021243.15	ENSMUST00000171040.2	731	8	3228	0	3228	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAATGCTATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	85020982	85030065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ENSMUSG00000021248.10_85390139_85401610_1	chr12	-	428	4	ISM	ENSMUSG00000021248.10	ENSMUST00000222585.2	619	5	19119	0	19119	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCCATTCTACTAACAG	NA	NA	NA	NA	NA	NA	NA	NA	85401610	85390138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568
ENSMUSG00000021248.10_85390139_85401633_1	chr12	-	451	4	ISM	ENSMUSG00000021248.10	ENSMUST00000222585.2	619	5	19096	0	19096	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCCATTCTACTAACAG	NA	NA	NA	NA	NA	NA	NA	NA	85401633	85390138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568
ENSMUSG00000021248.10_85390276_85401680_1	chr12	-	361	4	ISM	ENSMUSG00000021248.10	ENSMUST00000222585.2	619	5	19049	137	19049	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCATTGGACTAGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	85401680	85390275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568
ENSMUSG00000021248.10_85390293_85421265_1	chr12	-	395	5	FSM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	356	731	356	-154	multi-exon	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTTCCATGTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	85421265	85390292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
ENSMUSG00000021248.10_85391042_85421316_1	chr12	-	372	4	ISM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	305	1480	305	-903	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTACATGAAGAAGCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	85421316	85391041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85391126_85397576_85397651_85401568_85401681_85421214
ENSMUSG00000021248.10_85397577_85421464_1	chr12	-	436	3	ISM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	157	8015	157	-7438	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTACTGCTCCAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	85421464	85397576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85397651_85401568_85401681_85421214
ENSMUSG00000021252.12_85862828_85868888_1	chr12	-	377	4	ISM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	2408	606	2408	-606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCCTTAAACCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	85868888	85862827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861
ENSMUSG00000021252.12_85862908_85868923_1	chr12	-	332	4	ISM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	2373	686	2373	-686	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACAGAAGAAAAGAAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	85868923	85862907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861
ENSMUSG00000021253.8_86103685_86105725_1	chr12	-	1080	2	ISM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	20090	166	20090	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTGACATGATGACTC	NA	NA	NA	NA	NA	NA	NA	NA	86105725	86103684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_86104713_86105673
ENSMUSG00000021253.8_86103800_86108830_1	chr12	-	1096	3	ISM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	16985	281	16985	-281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGGATTCAGAGTCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	86108830	86103799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_86104713_86105673_86105828_86108801
ENSMUSG00000021253.8_86103869_86108892_1	chr12	-	1089	3	ISM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	16923	350	16923	-350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTTCCTTCTTGGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	86108892	86103868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_86104713_86105673_86105828_86108801
ENSMUSG00000021253.8_86103926_86108943_1	chr12	-	1083	3	ISM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	16872	407	16872	-407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCAAAAGCAGAGGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	86108943	86103925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_86104713_86105673_86105828_86108801
ENSMUSG00000021253.8_86104110_86116164_1	chr12	-	1081	5	ISM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	9651	591	9651	-591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTTCAGTTTACCA	NA	NA	NA	NA	NA	NA	NA	NA	86116164	86104109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_86104713_86105673_86105828_86108801_86108974_86110594_86110703_86116120
ENSMUSG00000021253.8_86104262_86116609_1	chr12	-	1104	6	ISM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	9206	743	9206	-743	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGGGCCTCGGGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	86116609	86104261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_86104713_86105673_86105828_86108801_86108974_86110594_86110703_86116120_86116251_86116520
ENSMUSG00000021253.8_86104373_86124449_1	chr12	-	1163	7	FSM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	1366	854	1366	-854	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGTGTGGGTTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	86124449	86104372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_86104713_86105673_86105828_86108801_86108974_86110594_86110703_86116120_86116251_86116520_86116685_86124354
ENSMUSG00000021253.8_86104469_86124491_1	chr12	-	1109	7	FSM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	1324	950	1324	-950	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAGCCCAGAAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	86124491	86104468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_86104713_86105673_86105828_86108801_86108974_86110594_86110703_86116120_86116251_86116520_86116685_86124354
ENSMUSG00000021253.8_86104544_86124557_1	chr12	-	1100	7	FSM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	1258	1025	1258	-1025	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACAGAGGAGGGAAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	86124557	86104543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_86104713_86105673_86105828_86108801_86108974_86110594_86110703_86116120_86116251_86116520_86116685_86124354
ENSMUSG00000021253.8_86105697_86124731_1	chr12	-	1082	6	ISM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	1084	2178	1084	-2178	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGCAGACACAACCCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	86124731	86105696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_86105828_86108801_86108974_86110594_86110703_86116120_86116251_86116520_86116685_86124354
ENSMUSG00000021253.8_86105746_86124799_1	chr12	-	1101	6	ISM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	1016	2227	1016	-2227	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGTTACTATGCCAACTT	NA	NA	NA	NA	NA	NA	NA	NA	86124799	86105745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_86105828_86108801_86108974_86110594_86110703_86116120_86116251_86116520_86116685_86124354
ENSMUSG00000021253.8_86105811_86124886_1	chr12	-	1123	6	ISM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	929	2292	929	-2292	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTACGCCCCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	86124886	86105810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_86105828_86108801_86108974_86110594_86110703_86116120_86116251_86116520_86116685_86124354
ENSMUSG00000021253.8_86110624_86125078_1	chr12	-	1097	4	ISM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	737	7105	737	-7105	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGAGGTGATGGAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	86125078	86110623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_86110703_86116120_86116251_86116520_86116685_86124354
ENSMUSG00000021253.8_86110667_86125150_1	chr12	-	1126	4	ISM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	665	7148	665	-7148	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCACACCTTTCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	86125150	86110666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_86110703_86116120_86116251_86116520_86116685_86124354
ENSMUSG00000021253.8_86116221_86125269_1	chr12	-	1109	3	ISM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	546	12702	546	-12702	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCGCTACATAGGTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	86125269	86116220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_86116251_86116520_86116685_86124354
ENSMUSG00000021253.8_86116664_86125418_1	chr12	-	1085	2	ISM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	397	13145	397	-13145	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAATTACCTCTAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	86125418	86116663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_86116685_86124354
ENSMUSG00000021258.11_108146106_108152831_1	chr12	+	231	2	ISM	ENSMUSG00000021258.11	ENST00000389879.9	2169	12	37	17405	37	-16785	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCGAGAGGGGGCTCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	108146105	108152831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108146140_108152634
ENSMUSG00000021258.11_108152739_108155347_1	chr12	+	249	3	ISM	ENSMUSG00000021258.11	ENSMUST00000101055.5	2627	11	6742	14271	6670	-14269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCTGGGAAAGTAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	108152738	108155347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108152882_108153437_108153520_108155323
ENSMUSG00000021258.11_108152793_108155394_1	chr12	+	242	3	ISM	ENSMUSG00000021258.11	ENSMUST00000101055.5	2627	11	6796	14224	6724	-14222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAACGGCTCGTAGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	108152792	108155394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108152882_108153437_108153520_108155323
ENSMUSG00000021258.11_108152847_108155462_1	chr12	+	256	3	ISM	ENSMUSG00000021258.11	ENSMUST00000101055.5	2627	11	6850	14156	6778	-14154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGCTTCCTGTCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	108152846	108155462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108152882_108153437_108153520_108155323
ENSMUSG00000021258.11_108155389_108161373_1	chr12	+	279	4	ISM	ENSMUSG00000021258.11	ENSMUST00000101055.5	2627	11	9392	8245	9320	-8243	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGTAATGTATCTTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	108155388	108161373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108155456_108159930_108160037_108160600_108160659_108161325
ENSMUSG00000021258.11_108160625_108161883_1	chr12	+	246	3	ISM	ENSMUSG00000021258.11	ENSMUST00000101055.5	2627	11	14628	7735	14556	-7733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATGCCTCATCACACC	NA	NA	NA	NA	NA	NA	NA	NA	108160624	108161883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108160659_108161325_108161496_108161841
ENSMUSG00000021258.11_108161369_108161955_1	chr12	+	241	2	ISM	ENSMUSG00000021258.11	ENSMUST00000101055.5	2627	11	15372	7663	15300	-7661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGCCACAGTCCCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	108161368	108161955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108161496_108161841
ENSMUSG00000021258.11_108161474_108162075_1	chr12	+	256	2	ISM	ENSMUSG00000021258.11	ENSMUST00000101055.5	2627	11	15477	7543	15405	-7541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCAGTCCTCCCCGACAG	NA	NA	NA	NA	NA	NA	NA	NA	108161473	108162075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108161496_108161841
ENSMUSG00000021258.11_108161946_108165606_1	chr12	+	238	3	ISM	ENSMUSG00000021258.11	ENSMUST00000101055.5	2627	11	15949	4012	15877	-4010	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCCACCATTGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	108161945	108165606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108162111_108162597_108162632_108165567
ENSMUSG00000021258.11_108162048_108168405_1	chr12	+	243	4	ISM	ENSMUSG00000021258.11	ENSMUST00000101055.5	2627	11	16051	1213	15979	-1211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAAGTCCAGATTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	108162047	108168405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108162111_108162597_108162632_108165567_108165643_108168334
ENSMUSG00000021258.11_108162100_108168455_1	chr12	+	241	4	ISM	ENSMUSG00000021258.11	ENSMUST00000101055.5	2627	11	16103	1163	16031	-1161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCATTGCCACATCGGC	NA	NA	NA	NA	NA	NA	NA	NA	108162099	108168455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108162111_108162597_108162632_108165567_108165643_108168334
ENSMUSG00000021259.6_108309272_108323830_1	chr12	+	866	9	ISM	ENSMUSG00000021259.6	ENST00000380228.6	1582	15	8278	4233	8278	-4233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCAGTATGGGTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	108309271	108323830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108309355_108311832_108311907_108312347_108312435_108317440_108317580_108318172_108318284_108319032_108319184_108319348_108319412_108321682_108321756_108323745
ENSMUSG00000021259.6_108317535_108327841_1	chr12	+	864	10	ISM	ENSMUSG00000021259.6	ENST00000380228.6	1582	15	16541	222	16541	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGCTGCAAGAGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	108317534	108327841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108317580_108318172_108318284_108319032_108319184_108319348_108319412_108321682_108321756_108323745_108323831_108324289_108324401_108326739_108326829_108327454_108327522_108327772
ENSMUSG00000021259.6_108319031_108328063_1	chr12	+	932	8	ISM	ENSMUSG00000021259.6	ENST00000380228.6	1582	15	18037	0	18037	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCTCGCCTGCTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	108319030	108328063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108319184_108319348_108319412_108321682_108321756_108323745_108323831_108324289_108324401_108326739_108326829_108327454_108327522_108327772
ENSMUSG00000021264.13_108759942_108781584_1	chr12	+	645	5	FSM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	1043	4490	15	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAGAAGACCTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	108759941	108781584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
ENSMUSG00000021265.4_108791799_108797166_1	chr12	-	1744	3	ISM	ENSMUSG00000021265.4	ENSMUST00000021693.4	1976	4	4643	0	4643	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAAGCTCCTCTGTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	108797166	108791798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108793415_108793599_108793684_108797122
ENSMUSG00000021265.4_108791952_108797166_1	chr12	-	1591	3	ISM	ENSMUSG00000021265.4	ENSMUST00000021693.4	1976	4	4643	153	4643	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGGCACTGTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	108797166	108791951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108793415_108793599_108793684_108797122
ENSMUSG00000021265.4_108792144_108801746_1	chr12	-	1568	4	FSM	ENSMUSG00000021265.4	ENSMUST00000021693.4	1976	4	63	345	63	-345	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCGGCCTCAATGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	108801746	108792143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_108793415_108793599_108793684_108797122_108797167_108801577
ENSMUSG00000021266.17_108825956_108828755_1	chr12	-	1424	2	ISM	ENSMUSG00000021266.17	ENST00000344102.9	1318	8	20080	-1236	20080	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	108828755	108825955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108827353_108828728
ENSMUSG00000021266.17_108825956_108828849_1	chr12	-	1518	2	ISM	ENSMUSG00000021266.17	ENST00000344102.9	1318	8	19986	-1236	19986	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	108828849	108825955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108827353_108828728
ENSMUSG00000021266.17_108826062_108828871_1	chr12	-	1434	2	ISM	ENSMUSG00000021266.17	ENST00000344102.9	1318	8	19964	-1130	19964	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTTGAAGTGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	108828871	108826061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108827353_108828728
ENSMUSG00000021266.17_108826132_108841207_1	chr12	-	983	6	ISM	ENSMUSG00000021266.17	ENSMUST00000161154.2	1824	11	17916	172	7628	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCGGGCTGCATGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	108841207	108826131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108826260_108827194_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039
ENSMUSG00000021266.17_108826429_108841083_1	chr12	-	1497	5	ISM	ENSMUSG00000021266.17	ENSMUST00000161154.2	1824	11	18040	469	7752	-469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCTGAGGTAGCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	108841083	108826428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039
ENSMUSG00000021266.17_108826501_108841207_1	chr12	-	1549	5	ISM	ENSMUSG00000021266.17	ENSMUST00000161154.2	1824	11	17916	541	7628	-541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCCGGGCGGATAACTG	NA	NA	NA	NA	NA	NA	NA	NA	108841207	108826500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039
ENSMUSG00000021266.17_108826559_108841207_1	chr12	-	1491	5	ISM	ENSMUSG00000021266.17	ENSMUST00000161154.2	1824	11	17916	599	7628	-599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTAGTAGAGCACTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	108841207	108826558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039
ENSMUSG00000021266.17_108826799_108847028_1	chr12	-	1446	7	ISM	ENSMUSG00000021266.17	ENSMUST00000161154.2	1824	11	12095	839	1807	393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGGTCTGAGCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	108847028	108826798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968
ENSMUSG00000021266.17_108827001_108848795_1	chr12	-	1468	8	ISM	ENSMUSG00000021266.17	ENSMUST00000161154.2	1824	11	10328	1041	40	191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCAGATAGAACCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	108848795	108827000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620
ENSMUSG00000021266.17_108827191_108847078_1	chr12	-	1109	7	NIC	ENSMUSG00000021266.17	novel	1318	8	NA	NA	1757	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTTTTCTGTGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	108847078	108827190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841034_108841223_108841591_108841712_108846968
ENSMUSG00000021266.17_108827191_108860027_1	chr12	-	1523	10	FSM	ENSMUSG00000021266.17	ENSMUST00000109848.10	2831	10	73	1235	73	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTTTTCTGTGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	108860027	108827190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ENSMUSG00000021266.17_108831937_108848834_1	chr12	-	1017	6	ISM	ENSMUSG00000021266.17	ENST00000344102.9	1318	8	1	4745	1	-4745	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTGGGAGAAGCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	108848834	108831936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108832226_108833602_108833700_108841034_108841223_108841591_108841712_108846968_108847078_108848620
ENSMUSG00000021266.17_108841590_108860027_1	chr12	-	638	5	ISM	ENSMUSG00000021266.17	ENST00000355338.6	1931	10	421	14398	73	-14398	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTGCTCATGTGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	108860027	108841589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108860007
ENSMUSG00000021266.17_108846993_108860119_1	chr12	-	584	4	ISM	ENSMUSG00000021266.17	ENST00000355338.6	1931	10	329	19801	-19	-19801	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGGCATCTTCTTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	108860119	108846992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108847078_108848620_108848835_108854301_108854475_108860007
ENSMUSG00000021266.17_108847047_108860180_1	chr12	-	591	4	ISM	ENSMUSG00000021266.17	ENST00000355338.6	1931	10	268	19855	-80	-19855	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGATAAACCGAATAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	108860180	108847046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108847078_108848620_108848835_108854301_108854475_108860007
ENSMUSG00000021266.17_108848721_108860303_1	chr12	-	583	3	ISM	ENSMUSG00000021266.17	ENST00000355338.6	1931	10	145	21529	145	-21529	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGACTCTGATGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	108860303	108848720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108848835_108854301_108854475_108860007
ENSMUSG00000021266.17_108848768_108860359_1	chr12	-	592	3	ISM	ENSMUSG00000021266.17	ENST00000355338.6	1931	10	89	21576	89	-21576	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTACAAGGCTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	108860359	108848767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108848835_108854301_108854475_108860007
ENSMUSG00000021268.18_109510068_109537968_1	chr12	+	1129	5	FSM	ENSMUSG00000021268.18	ENST00000398518.6	1270	5	23	118	23	-118	multi-exon	FALSE	canonical	NA	NA	NA	NA	2179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTACCCATGGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	109510067	109537968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_109510626_109512312_109512426_109513375_109513539_109524603_109524755_109537824
ENSMUSG00000021268.18_109510222_109538153_1	chr12	+	1160	5	FSM	ENSMUSG00000021268.18	ENST00000398518.6	1270	5	177	-67	177	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCAGTGATGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	109510221	109538153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_109510626_109512312_109512426_109513375_109513539_109524603_109524755_109537824
ENSMUSG00000021268.18_109510222_109538153_2	chr12	+	1153	5	NNC	ENSMUSG00000021268.18	novel	1270	5	NA	NA	177	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCAGTGATGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	109510221	109538153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_109510626_109512312_109512426_109513375_109513539_109524603_109524748_109537824
ENSMUSG00000021270.14_110657462_110660202_1	chr12	-	1622	6	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	2521	0	2521	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1066	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	110660202	110657461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144
ENSMUSG00000021270.14_110657462_110660262_1	chr12	-	1682	6	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	2461	0	2461	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	110660262	110657461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144
ENSMUSG00000021270.14_110657693_110660555_1	chr12	-	1598	7	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	2168	231	2168	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACATCTTAAAATTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	110660555	110657692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456
ENSMUSG00000021270.14_110657733_110660620_1	chr12	-	1623	7	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	2103	271	2103	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGGATTCCTTAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	110660620	110657732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456
ENSMUSG00000021270.14_110657872_110660739_1	chr12	-	1603	7	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	1984	410	1984	-410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTAAGGGGAAGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	110660739	110657871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456
ENSMUSG00000021270.14_110657971_110659054_1	chr12	-	464	3	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	3669	509	3669	-509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGAACTATGTGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	110659054	110657970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110658084_110658547_110658882_110659037
ENSMUSG00000021270.14_110658070_110659189_1	chr12	-	500	3	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	3534	608	3534	-608	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTACTGTGGATGACAC	NA	NA	NA	NA	NA	NA	NA	NA	110659189	110658069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110658084_110658547_110658882_110659037
ENSMUSG00000021270.14_110658603_110661549_1	chr12	-	1572	8	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	1174	1141	1174	-1141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATCCCCAGACCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	110661549	110658602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485
ENSMUSG00000021270.14_110658642_110661621_1	chr12	-	1605	8	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	1102	1180	1102	-1180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGAAACTGCACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	110661621	110658641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485
ENSMUSG00000021270.14_110658694_110661685_1	chr12	-	1617	8	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	1038	1232	1038	-1232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGCAGAGGCTGACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	110661685	110658693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485
ENSMUSG00000021270.14_110659143_110662114_1	chr12	-	1653	8	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	609	1681	609	-1681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCCAGAAGATGAAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	110662114	110659142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952
ENSMUSG00000021270.14_110659528_110660515_1	chr12	-	490	4	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	2208	2066	2208	-2066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGATGGTTTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	110660515	110659527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110659602_110659745_110659937_110660144_110660311_110660456
ENSMUSG00000021270.14_110659895_110660726_1	chr12	-	478	3	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	1997	2433	1997	-2433	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCCCGTGAAATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	110660726	110659894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110659937_110660144_110660311_110660456
ENSMUSG00000021270.14_110660609_110661662_1	chr12	-	480	3	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	1061	3147	1061	-3147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGATAAAGGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	110661662	110660608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110660778_110661004_110661139_110661485
ENSMUSG00000021270.14_110661063_110661999_1	chr12	-	490	3	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	724	3601	724	-3601	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAGGAGATCGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	110661999	110661062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110661139_110661485_110661853_110661952
ENSMUSG00000021270.14_110661704_110662829_1	chr12	-	455	3	ISM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	0	4665	0	-4242	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAACCTTGGCACCATTG	NA	NA	NA	NA	NA	NA	NA	NA	110662829	110661703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110661853_110661952_110662115_110662685
ENSMUSG00000021273.12_63382913_63400850_1	chr14	-	2256	6	ISM	ENSMUSG00000021273.12	ENSMUST00000238526.2	3048	7	1524	314	1524	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGCTTGGTCTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	63400850	63382912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750
ENSMUSG00000021273.12_63383270_63402243_1	chr14	-	2246	7	FSM	ENSMUSG00000021273.12	ENSMUST00000238526.2	3048	7	131	671	131	-668	multi-exon	FALSE	canonical	NA	NA	NA	NA	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTCTAGGCAACCACTC	NA	NA	NA	NA	NA	NA	NA	NA	63402243	63383269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980
ENSMUSG00000021273.12_63383336_63402374_1	chr14	-	2311	7	FSM	ENSMUSG00000021273.12	ENSMUST00000238526.2	3048	7	0	737	0	-734	multi-exon	FALSE	canonical	NA	NA	NA	NA	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTACATTGTCATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	63402374	63383335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980
ENSMUSG00000021273.12_63383999_63388735_1	chr14	-	556	2	ISM	ENSMUSG00000021273.12	ENSMUST00000238526.2	3048	7	13639	1400	13639	-1397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCACTGGCAGCGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	63388735	63383998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63384418_63388598
ENSMUSG00000021273.12_63384255_63394070_1	chr14	-	556	4	ISM	ENSMUSG00000021273.12	ENSMUST00000238526.2	3048	7	8304	1656	8304	-1653	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCTGAGCACCCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	63394070	63384254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007
ENSMUSG00000021273.12_63389773_63400804_1	chr14	-	555	4	ISM	ENSMUSG00000021273.12	ENSMUST00000238526.2	3048	7	1570	7174	1570	-7171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGGGGTGCTAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	63400804	63389772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63389953_63394007_63394200_63396466_63396596_63400750
ENSMUSG00000021273.12_63389875_63400906_1	chr14	-	555	4	ISM	ENSMUSG00000021273.12	ENSMUST00000238526.2	3048	7	1468	7276	1468	-7273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTCATAACCAACACCCT	NA	NA	NA	NA	NA	NA	NA	NA	63400906	63389874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63389953_63394007_63394200_63396466_63396596_63400750
ENSMUSG00000021273.12_63394143_63415246_1	chr14	-	583	5	ISM	ENSMUSG00000021273.12	ENSMUST00000054963.10	2860	8	-4	11541	-4	-11541	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGTTTGAAGACCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	63415246	63394142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63394200_63396466_63396596_63400750_63400935_63401980_63402079_63415131
ENSMUSG00000021273.12_63394179_63415307_1	chr14	-	608	5	ISM	ENSMUSG00000021273.12	ENSMUST00000054963.10	2860	8	-65	11577	-65	-11577	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGGAATTGGCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	63415307	63394178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63394200_63396466_63396596_63400750_63400935_63401980_63402079_63415131
ENSMUSG00000021273.12_63400859_63415475_1	chr14	-	518	3	ISM	ENSMUSG00000021273.12	ENSMUST00000054963.10	2860	8	-233	18257	-233	-18257	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGATCCCACTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	63415475	63400858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63400935_63401980_63402079_63415131
ENSMUSG00000021273.12_63402006_63415593_1	chr14	-	535	2	ISM	ENSMUSG00000021273.12	ENSMUST00000054963.10	2860	8	-351	19404	-351	-19404	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCGCTGGATGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	63415593	63402005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63402079_63415131
ENSMUSG00000021273.12_63402040_63415667_1	chr14	-	575	2	ISM	ENSMUSG00000021273.12	ENSMUST00000054963.10	2860	8	-425	19438	-425	-19438	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATCAGACCAGTCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	63415667	63402039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63402079_63415131
ENSMUSG00000021273.12_63415530_63417027_1	chr14	-	548	3	ISM	ENSMUSG00000021273.12	ENSMUST00000224625.2	3698	10	0	32931	0	-32928	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTTCCAGCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	63417027	63415529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63415941_63416341_63416427_63416975
ENSMUSG00000021276.11_110839410_110843405_1	chr12	-	1285	2	ISM	ENSMUSG00000021276.11	ENSMUST00000220607.2	1579	6	12126	-186	12126	186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTACTCCCTAAGTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	110843405	110839409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110840564_110843274
ENSMUSG00000021276.11_110839596_110850494_1	chr12	-	1399	4	ISM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	5085	552	5037	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATATTAATCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	110850494	110839595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110840564_110843274_110843405_110846118_110846249_110850323
ENSMUSG00000021276.11_110841597_110846194_1	chr12	-	320	3	ISM	ENSMUSG00000021276.11	ENSMUST00000222457.2	723	5	9356	129	9337	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGAGGCCAGCCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	110846194	110841596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_110841711_110843274_110843405_110846118
ENSMUSG00000021281.16_111409096_111420060_1	chr12	+	2177	12	FSM	ENSMUSG00000021281.16	ENSMUST00000102745.10	3762	12	193	1392	4	-1052	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCAGTGGCTCCAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	111409095	111420060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111409118_111411362_111411718_111411940_111412572_111414416_111414532_111414680_111414804_111414972_111415074_111415664_111415764_111416199_111416324_111417116_111417240_111417476_111417633_111417784_111417907_111419854
ENSMUSG00000021281.16_111411979_111420431_1	chr12	+	2133	10	ISM	ENSMUSG00000021281.16	ENSMUST00000102745.10	3762	12	3076	1021	2887	-681	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGGAAGCAGGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	111411978	111420431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111412572_111414416_111414532_111414680_111414804_111414972_111415074_111415664_111415764_111416199_111416324_111417116_111417240_111417476_111417633_111417784_111417907_111419854
ENSMUSG00000021281.16_111412036_111420490_1	chr12	+	2135	10	ISM	ENSMUSG00000021281.16	ENSMUST00000102745.10	3762	12	3133	962	2944	-622	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTACCACTCAGCTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	111412035	111420490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111412572_111414416_111414532_111414680_111414804_111414972_111415074_111415664_111415764_111416199_111416324_111417116_111417240_111417476_111417633_111417784_111417907_111419854
ENSMUSG00000021281.16_111412192_111420655_1	chr12	+	2144	10	ISM	ENSMUSG00000021281.16	ENSMUST00000102745.10	3762	12	3289	797	3100	-457	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACCGTCTGGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	111412191	111420655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111412572_111414416_111414532_111414680_111414804_111414972_111415074_111415664_111415764_111416199_111416324_111417116_111417240_111417476_111417633_111417784_111417907_111419854
ENSMUSG00000021281.16_111414417_111421112_1	chr12	+	2221	9	ISM	ENSMUSG00000021281.16	ENSMUST00000102745.10	3762	12	5514	340	5325	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCAAGGCAGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	111414416	111421112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111414532_111414680_111414804_111414972_111415074_111415664_111415764_111416199_111416324_111417116_111417240_111417476_111417633_111417784_111417907_111419854
ENSMUSG00000021281.16_111414457_111421112_1	chr12	+	2181	9	ISM	ENSMUSG00000021281.16	ENSMUST00000102745.10	3762	12	5554	340	5365	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCAAGGCAGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	111414456	111421112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111414532_111414680_111414804_111414972_111415074_111415664_111415764_111416199_111416324_111417116_111417240_111417476_111417633_111417784_111417907_111419854
ENSMUSG00000021281.16_111415045_111421452_1	chr12	+	2251	7	ISM	ENSMUSG00000021281.16	ENSMUST00000102745.10	3762	12	6142	0	5953	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGAGTGGTTTATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	111415044	111421452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111415074_111415664_111415764_111416199_111416324_111417116_111417240_111417476_111417633_111417784_111417907_111419854
ENSMUSG00000021282.18_111504450_111507006_1	chr12	+	1065	6	ISM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	0	6180	0	-4043	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCTTTTTAATAAATT	NA	NA	NA	NA	NA	NA	NA	NA	111504449	111507006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894
ENSMUSG00000021282.18_111504631_111508279_1	chr12	+	1024	7	ISM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	181	4907	-19	-2770	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTATAATGCTATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	111504630	111508279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139
ENSMUSG00000021282.18_111504787_111508708_1	chr12	+	1106	7	ISM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	337	4478	137	-2341	internal_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGCGTGTTAACATCCT	NA	NA	NA	NA	NA	NA	NA	NA	111504786	111508708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585
ENSMUSG00000021282.18_111504912_111508744_1	chr12	+	1017	7	ISM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	462	4442	262	-2305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATTTGTATAGATAACT	NA	NA	NA	NA	NA	NA	NA	NA	111504911	111508744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585
ENSMUSG00000021282.18_111505872_111509275_1	chr12	+	1078	7	ISM	ENSMUSG00000021282.18	ENSMUST00000050993.11	1969	11	656	2082	-178	-1774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGACATTTTTTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	111505871	111509275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113
ENSMUSG00000021282.18_111506077_111509698_1	chr12	+	1038	8	ISM	ENSMUSG00000021282.18	ENSMUST00000050993.11	1969	11	861	1659	27	-1351	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGGAGCATATAAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	111506076	111509698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533
ENSMUSG00000021282.18_111506077_111511054_1	chr12	+	1223	10	NNC	ENSMUSG00000021282.18	novel	1249	10	NA	NA	27	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGATGCAACTTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	111506076	111511054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_111506122_111506234_111506317_111506601_111506737_111506894_111507007_111508139_111508280_111508589_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUSG00000021282.18_111506077_111511054_2	chr12	+	1226	10	NNC	ENSMUSG00000021282.18	novel	1249	10	NA	NA	27	5	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGATGCAACTTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	111506076	111511054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_111506122_111506234_111506317_111506601_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509534_111509699_111509960_111510096_111510962
ENSMUSG00000021282.18_111506077_111511054_3	chr12	+	1221	10	NNC	ENSMUSG00000021282.18	novel	1249	10	NA	NA	27	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGATGCAACTTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	111506076	111511054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_111506122_111506234_111506317_111506601_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509119_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUSG00000021282.18_111506077_111511054_4	chr12	+	1226	10	NNC	ENSMUSG00000021282.18	novel	1249	10	NA	NA	27	5	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGATGCAACTTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	111506076	111511054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_111506122_111506234_111506317_111506601_111506737_111506895_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUSG00000021282.18_111506077_111511054_5	chr12	+	1221	10	NNC	ENSMUSG00000021282.18	novel	1249	10	NA	NA	27	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGATGCAACTTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	111506076	111511054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_111506122_111506240_111506317_111506601_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUSG00000021282.18_111506077_111511054_6	chr12	+	1227	10	FSM	ENSMUSG00000021282.18	ENST00000400019.2	1249	10	27	-5	27	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGATGCAACTTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	111506076	111511054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111506122_111506234_111506317_111506601_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUSG00000021282.18_111506077_111511054_7	chr12	+	1221	10	NNC	ENSMUSG00000021282.18	novel	1249	10	NA	NA	27	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGATGCAACTTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	111506076	111511054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_111506122_111506234_111506317_111506607_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUSG00000021282.18_111508139_111511186_1	chr12	+	986	6	ISM	ENSMUSG00000021282.18	ENST00000400019.2	1249	10	2089	-137	2089	137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTGGTCTATAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	111508138	111511186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUSG00000021282.18_111508170_111511355_1	chr12	+	1124	6	ISM	ENSMUSG00000021282.18	ENST00000400019.2	1249	10	2120	-306	2120	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCAGACTTTGGGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	111508169	111511355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUSG00000021282.18_111508236_111511355_1	chr12	+	1058	6	ISM	ENSMUSG00000021282.18	ENST00000400019.2	1249	10	2186	-306	2186	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCAGACTTTGGGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	111508235	111511355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUSG00000021282.18_111509129_111511530_1	chr12	+	1015	4	ISM	ENSMUSG00000021282.18	ENST00000400019.2	1249	10	3079	-481	3079	173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATCTCCAGTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	111509128	111511530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUSG00000021282.18_111509265_111511588_1	chr12	+	937	4	ISM	ENSMUSG00000021282.18	ENST00000400019.2	1249	10	3215	-539	3215	231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAATTGGTGATTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	111509264	111511588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUSG00000021282.18_111509265_111511629_1	chr12	+	978	4	ISM	ENSMUSG00000021282.18	ENST00000400019.2	1249	10	3215	-580	3215	272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAAAATGACCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	111509264	111511629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUSG00000021282.18_111509585_111511751_1	chr12	+	1038	3	ISM	ENSMUSG00000021282.18	ENST00000400019.2	1249	10	3535	-702	3535	394	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGGATAAGCCAGGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	111509584	111511751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111509699_111509960_111510096_111510962
ENSMUSG00000021282.18_111509995_111511868_1	chr12	+	1007	2	ISM	ENSMUSG00000021282.18	ENST00000400019.2	1249	10	3945	-819	3945	511	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAACAGGAAAAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	111509994	111511868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111510096_111510962
ENSMUSG00000021282.18_111510041_111511926_1	chr12	+	1019	2	ISM	ENSMUSG00000021282.18	ENST00000400019.2	1249	10	3991	-877	3991	569	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACCCTTAAATTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	111510040	111511926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111510096_111510962
ENSMUSG00000021286.9_111780604_111794290_1	chr12	+	778	7	FSM	ENSMUSG00000021286.9	ENSMUST00000021714.9	1308	7	0	530	0	-495	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGGAACTGAACTCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	111780603	111794290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794251
ENSMUSG00000021286.9_111780675_111794006_1	chr12	+	609	7	ISM	ENSMUSG00000021286.9	ENST00000216602.10	1307	8	20	810	6	-779	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTACACAGTGCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	111780674	111794006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792012_111792067_111793976
ENSMUSG00000021286.9_111789674_111794119_1	chr12	+	587	6	ISM	ENSMUSG00000021286.9	ENST00000216602.10	1307	8	9019	697	9005	-666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGCAGGGTCGGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	111789673	111794119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792012_111792067_111793976
ENSMUSG00000021286.9_111789674_111794448_1	chr12	+	730	6	ISM	ENSMUSG00000021286.9	ENSMUST00000021714.9	1308	7	9070	372	9005	-337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTAAAGAGCTTATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	111789673	111794448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794251
ENSMUSG00000021286.9_111790187_111794290_1	chr12	+	575	6	ISM	ENSMUSG00000021286.9	ENST00000216602.10	1307	8	9532	526	9518	-495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGGAACTGAACTCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	111790186	111794290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111790358_111791286_111791363_111791450_111791543_111792012_111792067_111793976_111794120_111794251
ENSMUSG00000021286.9_111791306_111794785_1	chr12	+	826	4	ISM	ENSMUSG00000021286.9	ENSMUST00000021714.9	1308	7	10702	35	10637	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAAGTGTATAATTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	111791305	111794785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111791363_111791450_111791543_111793976_111794120_111794251
ENSMUSG00000021286.9_111791337_111794785_1	chr12	+	795	4	ISM	ENSMUSG00000021286.9	ENSMUST00000021714.9	1308	7	10733	35	10668	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAAGTGTATAATTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	111791336	111794785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111791363_111791450_111791543_111793976_111794120_111794251
ENSMUSG00000021286.9_111792019_111794623_1	chr12	+	563	3	ISM	ENSMUSG00000021286.9	ENSMUST00000221375.2	1265	8	11350	162	11350	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTCACAATGCCTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	111792018	111794623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111792067_111793976_111794120_111794251
ENSMUSG00000021287.13_111770912_111776416_1	chr12	-	846	4	NIC	ENSMUSG00000021287.13	novel	835	4	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAGGGGGATGCCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	111776416	111770911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr12_-_111771159_111771348_111771562_111774266_111774422_111776185
ENSMUSG00000021287.13_111770912_111776416_2	chr12	-	850	4	FSM	ENSMUSG00000021287.13	ENST00000553264.5	835	4	-15	0	-15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAGGGGGATGCCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	111776416	111770911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_111771159_111771344_111771562_111774266_111774422_111776185
ENSMUSG00000021287.13_111770912_111776416_3	chr12	-	847	4	NNC	ENSMUSG00000021287.13	novel	835	4	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1031	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAGGGGGATGCCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	111776416	111770911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_111771159_111771344_111771562_111774269_111774422_111776185
ENSMUSG00000021288.20_111725390_111743471_1	chr12	+	885	5	ISM	ENSMUSG00000021288.20	ENSMUST00000118471.8	2272	14	0	17860	0	-17858	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTCTTTGGGTTACTGC	NA	NA	NA	NA	NA	NA	NA	NA	111725389	111743471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245
ENSMUSG00000021288.20_111738753_111755898_1	chr12	+	1629	12	ISM	ENSMUSG00000021288.20	ENSMUST00000120544.9	2261	14	0	5431	0	-5431	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGCGTAGAGTGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	111738752	111755898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758
ENSMUSG00000021288.20_111738925_111760832_1	chr12	+	1592	14	FSM	ENSMUSG00000021288.20	ENSMUST00000120544.9	2261	14	172	497	172	-497	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCCTCCAGTGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	111738924	111760832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111760082_111760134_111760770
ENSMUSG00000021288.20_111738974_111760877_1	chr12	+	1588	14	FSM	ENSMUSG00000021288.20	ENSMUST00000120544.9	2261	14	221	452	221	-452	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCAGCCGCACCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	111738973	111760877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111760082_111760134_111760770
ENSMUSG00000021288.20_111740900_111761022_1	chr12	+	1579	13	ISM	ENSMUSG00000021288.20	ENSMUST00000120544.9	2261	14	2147	307	2147	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTAACAGTTAAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	111740899	111761022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111760082_111760134_111760770
ENSMUSG00000021288.20_111742357_111761133_1	chr12	+	1573	12	ISM	ENSMUSG00000021288.20	ENSMUST00000120544.9	2261	14	3604	196	3604	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCATGTGCTGCACGTCC	NA	NA	NA	NA	NA	NA	NA	NA	111742356	111761133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111760082_111760134_111760770
ENSMUSG00000021288.20_111743246_111761331_1	chr12	+	1691	11	ISM	ENSMUSG00000021288.20	ENSMUST00000120544.9	2261	14	4493	-2	4493	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTGTGTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	111743245	111761331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111760082_111760134_111760770
ENSMUSG00000021288.20_111745032_111762112_1	chr12	+	897	8	ISM	ENSMUSG00000021288.20	ENSMUST00000239017.2	4089	16	19749	7562	6279	781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTATCTCCCGAGCGCG	NA	NA	NA	NA	NA	NA	NA	NA	111745031	111762112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111761981
ENSMUSG00000021288.20_111748102_111772772_1	chr12	+	869	9	ISM	ENSMUSG00000021288.20	ENSMUST00000084941.12	2504	16	22819	437	9349	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGCTGCTGCTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	111748101	111772772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111761981_111762113_111772441_111772509_111772748
ENSMUSG00000021288.20_111748182_111772830_1	chr12	+	847	9	ISM	ENSMUSG00000021288.20	ENSMUST00000084941.12	2504	16	22899	379	9429	-331	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGGTGGGGCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	111748181	111772830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111761981_111762113_111772441_111772509_111772748
ENSMUSG00000021288.20_111751920_111773145_1	chr12	+	883	6	ISM	ENSMUSG00000021288.20	ENSMUST00000084941.12	2504	16	26637	64	13167	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTACCAGAATGAAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	111751919	111773145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111751937_111753921_111754031_111755758_111755921_111761981_111762113_111772441_111772509_111772748
ENSMUSG00000021288.20_111753956_111773145_1	chr12	+	832	5	ISM	ENSMUSG00000021288.20	ENSMUST00000084941.12	2504	16	28673	64	15203	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTACCAGAATGAAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	111753955	111773145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_111754031_111755758_111755921_111761981_111762113_111772441_111772509_111772748
ENSMUSG00000021290.7_111927809_111933401_1	chr12	-	345	3	NNC	ENSMUSG00000021290.7	novel	366	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCTTCCCCTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	111933401	111927808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_111927982_111929659_111929788_111933357
ENSMUSG00000021301.10_14403871_14408992_1	chr13	-	1584	2	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	200086	-1259	200086	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATACGACATAAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	14408992	14403870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14405346_14408883
ENSMUSG00000021301.10_14404009_14411505_1	chr13	-	1566	3	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	197573	-1121	197573	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAATATTTAAGAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	14411505	14404008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14405346_14408883_14409083_14411475
ENSMUSG00000021301.10_14404136_14420358_1	chr13	-	1569	4	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	188720	-994	188720	-367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAGCACGATGGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	14420358	14404135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14405346_14408883_14409083_14411475_14411591_14420313
ENSMUSG00000021301.10_14404267_14422174_1	chr13	-	1571	5	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	186904	-863	186904	-498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAAACTTTTGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	14422174	14404266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14405346_14408883_14409083_14411475_14411591_14420313_14420461_14422143
ENSMUSG00000021301.10_14404476_14438680_1	chr13	-	1591	7	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	170398	-654	170398	654	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCAAGGAGCAAATCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	14438680	14404475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14405346_14408883_14409083_14411475_14411591_14420313_14420461_14422143_14422274_14422928_14423028_14438649
ENSMUSG00000021301.10_14404757_14440579_1	chr13	-	1583	9	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	168499	-373	168499	373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTATTCATTCTATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	14440579	14404756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14405346_14408883_14409083_14411475_14411591_14420313_14420461_14422143_14422274_14422928_14423028_14438649_14438803_14439697_14439812_14440542
ENSMUSG00000021301.10_14404927_14445633_1	chr13	-	1587	10	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	163445	-203	163445	203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAATAAATGTTTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	14445633	14404926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14405346_14408883_14409083_14411475_14411591_14420313_14420461_14422143_14422274_14422928_14423028_14438649_14438803_14439697_14439812_14440542_14440664_14445543
ENSMUSG00000021301.10_14405130_14491502_1	chr13	-	3329	19	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	117576	0	117576	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAATTAGAATTGGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	14491502	14405129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14405346_14408883_14409083_14411475_14411591_14420313_14420461_14422143_14422274_14422928_14423028_14438649_14438803_14439697_14439812_14440542_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14490601
ENSMUSG00000021301.10_14405176_14491561_1	chr13	-	3342	19	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	117517	46	117517	-46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTCCCTCCTTTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	14491561	14405175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14405346_14408883_14409083_14411475_14411591_14420313_14420461_14422143_14422274_14422928_14423028_14438649_14438803_14439697_14439812_14440542_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14490601
ENSMUSG00000021301.10_14405260_14491646_1	chr13	-	3343	19	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	117432	130	117432	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGCACCTTTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	14491646	14405259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14405346_14408883_14409083_14411475_14411591_14420313_14420461_14422143_14422274_14422928_14423028_14438649_14438803_14439697_14439812_14440542_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14490601
ENSMUSG00000021301.10_14408883_14491751_1	chr13	-	3363	18	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	117327	3753	117327	-3753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAGCTCCTGCCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	14491751	14408882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14409083_14411475_14411591_14420313_14420461_14422143_14422274_14422928_14423028_14438649_14438803_14439697_14439812_14440542_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14490601
ENSMUSG00000021301.10_14409052_14491948_1	chr13	-	3391	18	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	117130	3922	117130	-3922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGGCTGCAGTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	14491948	14409051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14409083_14411475_14411591_14420313_14420461_14422143_14422274_14422928_14423028_14438649_14438803_14439697_14439812_14440542_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14490601
ENSMUSG00000021301.10_14420380_14497174_1	chr13	-	3389	18	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	111904	15250	111904	-15250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGTGGCGTGTGGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	14497174	14420379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14420461_14422143_14422274_14422928_14423028_14438649_14438803_14439697_14439812_14440542_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14490601_14491946_14493458_14493560_14497062
ENSMUSG00000021301.10_14422155_14515361_1	chr13	-	3360	18	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	93717	17025	93717	-17025	internal_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGACAGGTTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	14515361	14422154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14422274_14422928_14423028_14438649_14438803_14439697_14439812_14440542_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14490601_14491946_14493458_14493560_14497062_14497206_14515329
ENSMUSG00000021301.10_14422197_14515422_1	chr13	-	3379	18	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	93656	17067	93656	-17067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGACATTCTAGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	14515422	14422196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14422274_14422928_14423028_14438649_14438803_14439697_14439812_14440542_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14490601_14491946_14493458_14493560_14497062_14497206_14515329
ENSMUSG00000021301.10_14422256_14515475_1	chr13	-	3373	18	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	93603	17126	93603	-17126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGAATATTTGGATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	14515475	14422255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14422274_14422928_14423028_14438649_14438803_14439697_14439812_14440542_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14490601_14491946_14493458_14493560_14497062_14497206_14515329
ENSMUSG00000021301.10_14438648_14486375_1	chr13	-	1626	13	ISM	ENSMUSG00000021301.10	ENST00000395891.7	6620	30	211114	34879	122703	-33518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCTCTAATGCTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	14486375	14438647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14438803_14439697_14439812_14440542_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14486273
ENSMUSG00000021301.10_14438648_14531812_1	chr13	-	3453	18	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	77266	33518	77266	-33518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCTCTAATGCTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	14531812	14438647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14438803_14439697_14439812_14440542_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14490601_14491946_14493458_14493560_14497062_14497206_14515329_14515500_14520604_14520681_14531717
ENSMUSG00000021301.10_14438790_14546569_1	chr13	-	3341	19	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	62509	33660	62509	-33660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTTCTCGAGAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	14546569	14438789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14438803_14439697_14439812_14440542_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14490601_14491946_14493458_14493560_14497062_14497206_14515329_14515500_14520604_14520681_14531717_14531813_14546539
ENSMUSG00000021301.10_14439790_14552278_1	chr13	-	3350	19	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	56800	34660	56800	-34660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGGAGGGGACCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	14552278	14439789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14439812_14440542_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14490601_14491946_14493458_14493560_14497062_14497206_14515329_14515500_14520604_14520681_14531717_14531813_14546539_14546648_14552242
ENSMUSG00000021301.10_14440584_14552358_1	chr13	-	3367	18	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	56720	35454	56720	-35454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	621	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCCAAAGGATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	14552358	14440583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14490601_14491946_14493458_14493560_14497062_14497206_14515329_14515500_14520604_14520681_14531717_14531813_14546539_14546648_14552242
ENSMUSG00000021301.10_14440632_14552414_1	chr13	-	3375	18	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	56664	35502	56664	-35502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATACCGAAGGGATTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	14552414	14440631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14490601_14491946_14493458_14493560_14497062_14497206_14515329_14515500_14520604_14520681_14531717_14531813_14546539_14546648_14552242
ENSMUSG00000021301.10_14445611_14552521_1	chr13	-	3383	17	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	56557	40481	56557	-40481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCACCCTGGATATAG	NA	NA	NA	NA	NA	NA	NA	NA	14552521	14445610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14490601_14491946_14493458_14493560_14497062_14497206_14515329_14515500_14520604_14520681_14531717_14531813_14546539_14546648_14552242
ENSMUSG00000021301.10_14460196_14491464_1	chr13	-	1639	7	ISM	ENSMUSG00000021301.10	ENST00000395891.7	6620	30	206025	56427	117614	-55066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCCAATCATCTAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	14491464	14460195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14486273_14486376_14490601
ENSMUSG00000021301.10_14486305_14497103_1	chr13	-	1557	4	ISM	ENSMUSG00000021301.10	ENST00000395891.7	6620	30	200386	82536	111975	-81175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCAACAATCGATGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	14497103	14486304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14486376_14490601_14491946_14493458_14493560_14497062
ENSMUSG00000021301.10_14491553_14696160_1	chr13	-	1614	10	ISM	ENSMUSG00000021301.10	ENST00000395891.7	6620	30	1329	87784	1329	-86423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTAGGCAGCAAGGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	14696160	14491552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14491946_14493458_14493560_14497062_14497206_14515329_14515500_14520604_14520681_14531717_14531813_14546539_14546648_14552242_14552568_14609018_14609077_14696015
ENSMUSG00000021301.10_14491590_14696196_1	chr13	-	1613	10	ISM	ENSMUSG00000021301.10	ENST00000395891.7	6620	30	1293	87821	1293	-86460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCGCCATCCTCGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	14696196	14491589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14491946_14493458_14493560_14497062_14497206_14515329_14515500_14520604_14520681_14531717_14531813_14546539_14546648_14552242_14552568_14609018_14609077_14696015
ENSMUSG00000021301.10_14491730_14697448_1	chr13	-	1560	11	ISM	ENSMUSG00000021301.10	ENST00000395891.7	6620	30	41	87961	41	-86600	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGCTATGGAGGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	14697448	14491729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14491946_14493458_14493560_14497062_14497206_14515329_14515500_14520604_14520681_14531717_14531813_14546539_14546648_14552242_14552568_14609018_14609077_14696015_14696244_14697408
ENSMUSG00000021302.11_14228126_14237958_1	chr13	-	1247	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	115	2882	45	693	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTACGGATGGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	14237958	14228125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
ENSMUSG00000021302.11_14228247_14238029_1	chr13	-	1197	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	44	3003	-26	572	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCAGTTGAAAATGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	14238029	14228246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
ENSMUSG00000021306.12_13532205_13568008_1	chr13	-	2780	7	FSM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	191	0	191	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCAACTGGTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	13568008	13532204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ENSMUSG00000021306.12_13532205_13568149_1	chr13	-	2914	7	NNC	ENSMUSG00000021306.12	novel	2971	7	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCAACTGGTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	13568149	13532204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542180_13542397_13548943_13548994_13567709
ENSMUSG00000021311.10_12202997_12256552_1	chr13	-	2440	21	ISM	ENSMUSG00000021311.10	ENST00000681177.1	3238	28	12306	72	12306	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2749	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCAGGGCTGTACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	12256552	12202996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450
ENSMUSG00000021311.10_12204315_12262249_1	chr13	-	2517	23	ISM	ENSMUSG00000021311.10	ENST00000681177.1	3238	28	6609	1390	6609	-1390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3753	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTCCTGGTTACCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	12262249	12204314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204
ENSMUSG00000021311.10_12205089_12262311_1	chr13	-	2460	22	NNC	ENSMUSG00000021311.10	novel	3238	28	NA	NA	6547	-2164	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2760	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACGTTGGGTAGATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	12262311	12205088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227362_12227552_12227665_12230298_12230452_12231695_12231786_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204
ENSMUSG00000021311.10_12205147_12262796_1	chr13	-	2429	23	ISM	ENSMUSG00000021311.10	ENST00000681177.1	3238	28	6062	2222	6062	-2222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2509	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCGATGACTACAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	12262796	12205146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778
ENSMUSG00000021311.10_12205213_12262834_1	chr13	-	2398	23	NNC	ENSMUSG00000021311.10	novel	3238	28	NA	NA	6024	-2288	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1534	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTACTTGGGTCTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	12262834	12205212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258823_12258916_12259440_12259504_12262204_12262312_12262778
ENSMUSG00000021311.10_12205270_12264784_1	chr13	-	2435	24	ISM	ENSMUSG00000021311.10	ENST00000681177.1	3238	28	4074	2345	4074	-2345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1659	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACCCCTACCACTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	12264784	12205269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730
ENSMUSG00000021311.10_12208499_12265579_1	chr13	-	2523	24	ISM	ENSMUSG00000021311.10	ENST00000681177.1	3238	28	3279	5574	3279	-5574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAATGTGTGTGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	12265579	12208498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487
ENSMUSG00000021311.10_12208606_12265548_1	chr13	-	2376	24	NNC	ENSMUSG00000021311.10	novel	3238	28	NA	NA	3310	-5681	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1066	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGGCCAGCACAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	12265548	12208605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227362_12227552_12227665_12230298_12230452_12231695_12231786_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487
ENSMUSG00000021311.10_12208641_12268698_1	chr13	-	2428	25	ISM	ENSMUSG00000021311.10	ENST00000681177.1	3238	28	160	5716	160	-5716	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2071	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCAAAAGAAACTGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	12268698	12208640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649
ENSMUSG00000021311.10_12208683_12268765_1	chr13	-	2453	25	ISM	ENSMUSG00000021311.10	ENST00000681177.1	3238	28	93	5758	93	-5758	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1691	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTATACAATGATGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	12268765	12208682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649
ENSMUSG00000021311.10_12210193_12268805_1	chr13	-	2405	24	NNC	ENSMUSG00000021311.10	novel	3238	28	NA	NA	53	-7268	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1153	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGGCAGCTCCGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	12268805	12210192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12242569_12242756_12245830_12245972_12247787_12247901_12250347_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649
ENSMUSG00000021311.10_12230390_12242617_1	chr13	-	458	5	ISM	ENSMUSG00000021311.10	ENST00000681102.1	3496	30	26241	27465	26241	-27465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGCCTCTGAATATAATTG	NA	NA	NA	NA	NA	NA	NA	NA	12242617	12230389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12242569
ENSMUSG00000021311.10_12231766_12242718_1	chr13	-	427	4	ISM	ENSMUSG00000021311.10	ENST00000681102.1	3496	30	26140	28841	26140	-28841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTCATCCAGACAGATG	NA	NA	NA	NA	NA	NA	NA	NA	12242718	12231765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_12231786_12236307_12236449_12237040_12237158_12242569
ENSMUSG00000021322.9_21024275_21094295_1	chr13	+	350	5	ISM	ENSMUSG00000021322.9	ENST00000617267.4	1626	20	10	113217	10	58213	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTGCTGTGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	21024274	21094295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_21024333_21035248_21035349_21084639_21084700_21089830_21089902_21094234
ENSMUSG00000021322.9_21084638_21099170_1	chr13	+	363	6	ISM	ENSMUSG00000021322.9	ENST00000617267.4	1626	20	60373	108342	60373	63088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAAACTACAAGACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	21084637	21099170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_21084700_21089830_21089902_21094234_21094296_21095286_21095358_21096099_21096149_21099121
ENSMUSG00000021322.9_21096130_21163716_1	chr13	+	338	5	ISM	ENSMUSG00000021322.9	ENST00000617267.4	1626	20	71865	43796	71865	-43796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTAGCCTGTCACTTAT	NA	NA	NA	NA	NA	NA	NA	NA	21096129	21163716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_21096149_21099121_21099171_21101229_21101325_21125983_21126076_21163633
ENSMUSG00000021322.9_21099121_21178831_1	chr13	+	351	5	ISM	ENSMUSG00000021322.9	ENST00000617267.4	1626	20	74856	28681	74856	-28681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGGTCAGTGGAACATA	NA	NA	NA	NA	NA	NA	NA	NA	21099120	21178831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_21099171_21101229_21101325_21125983_21126076_21163633_21163717_21178800
ENSMUSG00000021322.9_21126005_21184154_1	chr13	+	353	5	ISM	ENSMUSG00000021322.9	ENST00000617267.4	1626	20	101740	23358	101740	-23358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAATGGCAGCCACGTTA	NA	NA	NA	NA	NA	NA	NA	NA	21126004	21184154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21184067
ENSMUSG00000021322.9_21163686_21186852_1	chr13	+	344	5	ISM	ENSMUSG00000021322.9	ENST00000617267.4	1626	20	139421	20660	139421	-20660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTCTTCTCCTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	21163685	21186852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_21163717_21178800_21178838_21179589_21179665_21184067_21184241_21186824
ENSMUSG00000021322.9_21179588_21187126_1	chr13	+	369	4	ISM	ENSMUSG00000021322.9	ENST00000617267.4	1626	20	155323	20386	155323	-20386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGAGCTGCTGCCCCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	21179587	21187126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_21179665_21184067_21184241_21186824_21186884_21187066
ENSMUSG00000021322.9_21184191_21205228_1	chr13	+	389	6	ISM	ENSMUSG00000021322.9	ENST00000617267.4	1626	20	159926	2284	159926	-2284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAGACTAGCTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	21184190	21205228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_21184241_21186824_21186884_21187066_21187127_21189200_21189298_21197281_21197359_21205182
ENSMUSG00000021326.14_21363615_21368012_1	chr13	+	1298	4	ISM	ENSMUSG00000021326.14	ENSMUST00000222544.2	4312	9	0	10882	0	-9009	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATCTATAACAGCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	21363614	21368012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_21363727_21364105_21365085_21366153_21366250_21367901
ENSMUSG00000021326.14_21364101_21368132_1	chr13	+	1311	3	ISM	ENSMUSG00000021326.14	ENSMUST00000223065.2	2046	8	-293	8901	0	-8889	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACCAAGAGAGCACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	21364100	21368132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_21365085_21366153_21366250_21367901
ENSMUSG00000021326.14_21364128_21377622_1	chr13	+	2904	7	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	27	589	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGGCCTGGTCTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	21364127	21377622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_21365085_21366153_21366250_21367901_21368154_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ENSMUSG00000021326.14_21364231_21377653_1	chr13	+	2808	6	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	130	620	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCAGTGGTCCTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	21364230	21377653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374175_21376199
ENSMUSG00000021326.14_21364652_21378063_1	chr13	+	2821	7	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	258	-830	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCGAGTGCTGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	21364651	21378063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_21365085_21366153_21366250_21367901_21368154_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ENSMUSG00000021326.14_21364732_21378157_1	chr13	+	2837	8	FSM	ENSMUSG00000021326.14	ENSMUST00000021761.13	4204	8	631	736	338	-736	multi-exon	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATCCATAAATATGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	21364731	21378157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ENSMUSG00000021326.14_21364831_21378300_1	chr13	+	2879	7	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	437	-593	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGTCTCTCTTGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	21364830	21378300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_21365085_21366153_21366250_21367901_21368154_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ENSMUSG00000021326.14_21366158_21378554_1	chr13	+	2877	7	ISM	ENSMUSG00000021326.14	ENSMUST00000221464.2	1400	8	850	-1533	850	-339	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTTAGTGTTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	21366157	21378554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ENSMUSG00000021326.14_21366175_21378555_1	chr13	+	2859	6	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	867	-338	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATTTAGTGTTGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	21366174	21378555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_21366250_21367901_21368154_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ENSMUSG00000021326.14_21367990_21378702_1	chr13	+	2845	6	ISM	ENSMUSG00000021326.14	ENSMUST00000021761.13	4204	8	3889	191	2682	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATAATCTCTAAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	21367989	21378702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ENSMUSG00000021326.14_21374025_21378894_1	chr13	+	2843	2	NNC	ENSMUSG00000021326.14	novel	4312	9	NA	NA	8717	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTTATTTTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	21374024	21378894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_21374171_21376197
ENSMUSG00000021327.20_21571564_21580587_1	chr13	-	1968	5	ISM	ENSMUSG00000021327.20	ENSMUST00000070785.16	2561	6	6296	391	101	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTATCTGGAAATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	21580587	21571563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269
ENSMUSG00000021327.20_21571564_21580587_2	chr13	-	1976	5	NIC	ENSMUSG00000021327.20	novel	2081	5	NA	NA	101	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	2504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTATCTGGAAATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	21580587	21571563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr13_-_21572872_21578118_21578256_21578686_21578752_21578928_21579077_21580269
ENSMUSG00000021327.20_21571664_21580587_1	chr13	-	1879	5	NNC	ENSMUSG00000021327.20	novel	2081	5	NA	NA	101	-100	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTGGAACTCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	21580587	21571663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_21572872_21578119_21578256_21578686_21578752_21578924_21579077_21580269
ENSMUSG00000021327.20_21571664_21580587_2	chr13	-	1873	5	NNC	ENSMUSG00000021327.20	novel	2081	5	NA	NA	101	-100	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTGGAACTCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	21580587	21571663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_21572872_21578118_21578256_21578686_21578752_21578924_21579070_21580269
ENSMUSG00000021327.20_21571664_21580587_3	chr13	-	1880	5	FSM	ENSMUSG00000021327.20	ENST00000377255.3	2081	5	101	100	101	-100	multi-exon	FALSE	canonical	NA	NA	NA	NA	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTGGAACTCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	21580587	21571663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_21572872_21578118_21578256_21578686_21578752_21578924_21579077_21580269
ENSMUSG00000021327.20_21571664_21580685_1	chr13	-	1974	5	NIC	ENSMUSG00000021327.20	novel	2081	5	NA	NA	3	-100	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTGGAACTCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	21580685	21571663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr13_-_21572872_21578118_21578256_21578686_21578752_21578928_21579077_21580269
ENSMUSG00000021327.20_21571664_21580685_2	chr13	-	1966	5	ISM	ENSMUSG00000021327.20	ENSMUST00000070785.16	2561	6	6198	491	3	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTGGAACTCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	21580685	21571663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269
ENSMUSG00000021338.18_24338660_24465225_1	chr13	-	689	8	NNC	ENSMUSG00000021338.18	novel	739	8	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCCCATCTTCCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	24465225	24338659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24465111
ENSMUSG00000021338.18_24338660_24465225_2	chr13	-	686	8	NNC	ENSMUSG00000021338.18	novel	739	8	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCCCATCTTCCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	24465225	24338659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24465114
ENSMUSG00000021338.18_24338660_24465225_3	chr13	-	688	8	FSM	ENSMUSG00000021338.18	ENST00000461945.1	739	8	51	0	51	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCCCATCTTCCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	24465225	24338659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24465112
ENSMUSG00000021338.18_24338660_24465225_4	chr13	-	682	8	NNC	ENSMUSG00000021338.18	novel	739	8	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCCCATCTTCCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	24465225	24338659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357653_24362189_24362241_24460439_24460538_24465112
ENSMUSG00000021338.18_24338660_24465225_5	chr13	-	682	8	NNC	ENSMUSG00000021338.18	novel	739	8	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCCCATCTTCCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	24465225	24338659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460445_24460538_24465112
ENSMUSG00000021339.5_25176842_25177768_1	chr13	-	446	2	ISM	ENSMUSG00000021339.5	ENST00000274747.11	1214	8	24811	0	24811	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTTTTTAAAGTATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	25177768	25176841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_25177172_25177652
ENSMUSG00000021339.5_25177039_25179448_1	chr13	-	486	4	ISM	ENSMUSG00000021339.5	ENST00000274747.11	1214	8	23131	197	23131	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATACTTCTGAAGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	25179448	25177038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327
ENSMUSG00000021339.5_25177146_25181066_1	chr13	-	467	5	ISM	ENSMUSG00000021339.5	ENST00000274747.11	1214	8	21513	304	21513	-304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGCCAATAGAAGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	25181066	25177145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010
ENSMUSG00000021339.5_25177751_25182964_1	chr13	-	461	5	ISM	ENSMUSG00000021339.5	ENST00000274747.11	1214	8	19615	909	19615	-909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGTTACGGGGATTATG	NA	NA	NA	NA	NA	NA	NA	NA	25182964	25177750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907
ENSMUSG00000021339.5_25178809_25185662_1	chr13	-	471	5	ISM	ENSMUSG00000021339.5	ENST00000274747.11	1214	8	16917	1967	16917	-1967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTTAAATCTCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	25185662	25178808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609
ENSMUSG00000021339.5_25179372_25185783_1	chr13	-	531	4	ISM	ENSMUSG00000021339.5	ENST00000274747.11	1214	8	16796	2530	16796	-2530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTGACGATTCGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	25185783	25179371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_25179481_25181010_25181128_25182907_25183039_25185609
ENSMUSG00000021339.5_25181046_25202565_1	chr13	-	450	4	ISM	ENSMUSG00000021339.5	ENST00000274747.11	1214	8	14	4204	14	-4204	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTCTGACCAAGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	25202565	25181045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_25181128_25182907_25183039_25185609_25185784_25202502
ENSMUSG00000021361.8_41169768_41176062_2	chr13	+	908	6	NNC	ENSMUSG00000021361.8	novel	914	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTCGTCTTTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	41169767	41176062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_41169875_41170596_41170650_41171181_41171259_41171831_41171934_41174594_41174683_41175581
ENSMUSG00000021363.15_41179875_41195637_1	chr13	-	588	4	ISM	ENSMUSG00000021363.15	ENST00000536370.6	2064	12	28307	81	28298	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGACTCATTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	41195637	41179874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_41180039_41188229_41188362_41193104_41193254_41195494
ENSMUSG00000021363.15_41179875_41210124_1	chr13	-	1768	12	ISM	ENSMUSG00000021363.15	ENSMUST00000021792.5	3385	13	13817	1279	13811	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGACTCATTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	41210124	41179874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_41180039_41183492_41183616_41188229_41188362_41193104_41193254_41195494_41195662_41199494_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078
ENSMUSG00000021363.15_41179875_41223943_1	chr13	-	2173	14	NNC	ENSMUSG00000021363.15	novel	3573	14	NA	NA	-1	-81	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGACTCATTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	41223943	41179874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_41180039_41183492_41183613_41186000_41186076_41188229_41188362_41193104_41193254_41195494_41195655_41199494_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210134_41223612
ENSMUSG00000021363.15_41179875_41223943_2	chr13	-	2175	14	NNC	ENSMUSG00000021363.15	novel	3573	14	NA	NA	-1	-81	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGACTCATTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	41223943	41179874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_41180039_41183492_41183613_41186000_41186076_41188229_41188362_41193104_41193254_41195494_41195662_41199494_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210127_41223610
ENSMUSG00000021363.15_41179875_41233118_1	chr13	-	2219	15	FSM	ENSMUSG00000021363.15	ENSMUST00000165087.8	3562	15	64	1279	-4	-81	multi-exon	FALSE	canonical	NA	NA	NA	NA	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGACTCATTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	41233118	41179874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_41180039_41183492_41183613_41186000_41186076_41188229_41188362_41193104_41193254_41195494_41195662_41199494_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210134_41223612_41223942_41233077
ENSMUSG00000021363.15_41179985_41199569_1	chr13	-	577	5	ISM	ENSMUSG00000021363.15	ENSMUST00000070193.14	2937	12	33611	1054	24366	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCACAGCCAAAAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	41199569	41179984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_41180039_41188229_41188362_41193104_41193254_41195494_41195662_41199494
ENSMUSG00000021363.15_41180009_41223651_1	chr13	-	1682	13	FSM	ENSMUSG00000021363.15	ENSMUST00000021792.5	3385	13	290	1413	284	-215	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTTTTCGGGACGAACT	NA	NA	NA	NA	NA	NA	NA	NA	41223651	41180008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_41180039_41183492_41183616_41188229_41188362_41193104_41193254_41195494_41195662_41199494_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210134_41223612
ENSMUSG00000021363.15_41183493_41223664_1	chr13	-	1665	12	ISM	ENSMUSG00000021363.15	ENSMUST00000021792.5	3385	13	277	4897	271	-3699	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGTGATCCCCTCATA	NA	NA	NA	NA	NA	NA	NA	NA	41223664	41183492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_41183616_41188229_41188362_41193104_41193254_41195494_41195662_41199494_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210134_41223612
ENSMUSG00000021363.15_41183559_41223704_1	chr13	-	1639	12	ISM	ENSMUSG00000021363.15	ENSMUST00000021792.5	3385	13	237	4963	231	-3765	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGAAAGAAGTGGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	41223704	41183558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_41183616_41188229_41188362_41193104_41193254_41195494_41195662_41199494_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210134_41223612
ENSMUSG00000021363.15_41183591_41223780_1	chr13	-	1683	12	ISM	ENSMUSG00000021363.15	ENSMUST00000021792.5	3385	13	161	4995	155	-3797	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAACCAGACGGGATACA	NA	NA	NA	NA	NA	NA	NA	NA	41223780	41183590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_41183616_41188229_41188362_41193104_41193254_41195494_41195662_41199494_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210134_41223612
ENSMUSG00000021365.16_41465293_41469854_1	chr13	-	1049	3	ISM	ENSMUSG00000021365.16	ENSMUST00000163623.3	4626	7	42869	1897	42869	-1897	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCGAACAGCTCAAGACGAT	NA	NA	NA	NA	NA	NA	NA	NA	41469854	41465292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_41465647_41467841_41467932_41469249
ENSMUSG00000021365.16_41465429_41470003_1	chr13	-	1062	3	ISM	ENSMUSG00000021365.16	ENSMUST00000163623.3	4626	7	42720	2033	42720	-2033	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACGGATCTTTGTGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	41470003	41465428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_41465647_41467841_41467932_41469249
ENSMUSG00000021366.9_42311936_42317737_1	chr13	+	2035	3	ISM	ENSMUSG00000021366.9	ENST00000541134.5	8536	7	35302	20768	35302	-20765	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAGTACATTTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	42311935	42317737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_42313795_42316826_42316965_42317699
ENSMUSG00000021366.9_42312130_42321096_1	chr13	+	2031	4	ISM	ENSMUSG00000021366.9	ENST00000541134.5	8536	7	35496	17409	35496	-17406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCGGTGGGCTTGATAGA	NA	NA	NA	NA	NA	NA	NA	NA	42312129	42321096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_42313795_42316826_42316965_42317699_42317869_42321037
ENSMUSG00000021366.9_42312197_42321139_1	chr13	+	2007	4	ISM	ENSMUSG00000021366.9	ENST00000541134.5	8536	7	35563	17366	35563	-17363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCCCTGCTCCGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	42312196	42321139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_42313795_42316826_42316965_42317699_42317869_42321037
ENSMUSG00000021366.9_42312298_42335035_1	chr13	+	2034	5	ISM	ENSMUSG00000021366.9	ENST00000541134.5	8536	7	35664	3470	35664	-3467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCTCAGTCACAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	42312297	42335035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_42313795_42316826_42316965_42317699_42317869_42321037_42321140_42334907
ENSMUSG00000021366.9_42312357_42335099_1	chr13	+	2039	5	ISM	ENSMUSG00000021366.9	ENST00000541134.5	8536	7	35723	3406	35723	-3403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCGAGGAGGAGCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	42312356	42335099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_42313795_42316826_42316965_42317699_42317869_42321037_42321140_42334907
ENSMUSG00000021366.9_42312549_42335276_1	chr13	+	2024	5	ISM	ENSMUSG00000021366.9	ENST00000541134.5	8536	7	35915	3229	35915	-3226	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGCTCCTCCCGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	42312548	42335276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_42313795_42316826_42316965_42317699_42317869_42321037_42321140_42334907
ENSMUSG00000021366.9_42313006_42337222_1	chr13	+	2047	6	ISM	ENSMUSG00000021366.9	ENST00000541134.5	8536	7	36372	1283	36372	-1280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAAGCTTCGGGCGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	42313005	42337222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_42313795_42316826_42316965_42317699_42317869_42321037_42321140_42334907_42335402_42336867
ENSMUSG00000021366.9_42313353_42337539_1	chr13	+	2017	6	ISM	ENSMUSG00000021366.9	ENST00000541134.5	8536	7	36719	966	36719	-963	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCTGATCCCCTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	42313352	42337539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_42313795_42316826_42316965_42317699_42317869_42321037_42321140_42334907_42335402_42336867
ENSMUSG00000021366.9_42313545_42337744_1	chr13	+	2030	6	ISM	ENSMUSG00000021366.9	ENST00000541134.5	8536	7	36911	761	36911	-758	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCAACCAAAATGGACACC	NA	NA	NA	NA	NA	NA	NA	NA	42313544	42337744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_42313795_42316826_42316965_42317699_42317869_42321037_42321140_42334907_42335402_42336867
ENSMUSG00000021366.9_42316885_42338068_1	chr13	+	2046	5	ISM	ENSMUSG00000021366.9	ENST00000541134.5	8536	7	40251	437	40251	-434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACATAAACTCATGACTAA	NA	NA	NA	NA	NA	NA	NA	NA	42316884	42338068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_42316965_42317699_42317869_42321037_42321140_42334907_42335402_42336867
ENSMUSG00000021366.9_42334950_42338502_1	chr13	+	2087	2	ISM	ENSMUSG00000021366.9	ENST00000541134.5	8536	7	58316	3	58316	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGGTGCTTACGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	42334949	42338502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_42335402_42336867
ENSMUSG00000021366.9_42335001_42338505_1	chr13	+	2039	2	ISM	ENSMUSG00000021366.9	ENST00000541134.5	8536	7	58367	0	58367	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGCTTACGTCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	42335000	42338505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_42335402_42336867
ENSMUSG00000021368.16_43305320_43318832_1	chr13	-	629	5	ISM	ENSMUSG00000021368.16	ENSMUST00000179852.9	1246	8	6128	104	5992	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCACCTGCTCTACCAA	NA	NA	NA	NA	NA	NA	NA	NA	43318832	43305319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754
ENSMUSG00000021368.16_43306548_43323311_1	chr13	-	715	6	ISM	ENSMUSG00000021368.16	ENSMUST00000220787.2	892	8	1513	1228	1513	-1228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGAGTGCTTTGTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	43323311	43306547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277
ENSMUSG00000021368.16_43306660_43323423_1	chr13	-	715	6	ISM	ENSMUSG00000021368.16	ENSMUST00000220787.2	892	8	1401	1340	1401	-1340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGGATCCTGTAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	43323423	43306659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277
ENSMUSG00000021368.16_43308182_43324840_1	chr13	-	738	6	ISM	ENSMUSG00000021368.16	ENSMUST00000220787.2	892	8	-16	2862	-16	-2862	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCAGTTTACAGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	43324840	43308181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
ENSMUSG00000021368.16_43312739_43324946_1	chr13	-	715	5	ISM	ENSMUSG00000021368.16	ENSMUST00000179852.9	1246	8	14	7523	14	-7419	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAATTTTTGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	43324946	43312738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
ENSMUSG00000021371.6_43691869_43713498_1	chr13	-	4200	9	FSM	ENSMUSG00000021371.6	ENSMUST00000021800.6	4339	9	139	0	139	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGTACAGTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	43713498	43691868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
ENSMUSG00000021375.12_47068676_47083194_1	chr13	-	284	3	FSM	ENSMUSG00000021375.12	ENST00000502704.2	336	3	53	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGGAGCCTAGAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	47083194	47068675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_47068717_47082691_47082783_47083042
ENSMUSG00000021376.12_47177693_47180774_1	chr13	-	1308	2	ISM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	15912	674	15826	-674	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGCAGTGAGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	47180774	47177692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_47178954_47180727
ENSMUSG00000021376.12_47177822_47189425_1	chr13	-	1446	6	ISM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	7261	803	7175	-803	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGATTTATTATTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	47189425	47177821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370
ENSMUSG00000021376.12_47178060_47193672_1	chr13	-	1379	7	ISM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	3014	1041	2928	595	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGAAGGCTGTTATGG	NA	NA	NA	NA	NA	NA	NA	NA	47193672	47178059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579
ENSMUSG00000021376.12_47178349_47196635_1	chr13	-	1327	9	FSM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	51	1330	-35	306	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAAATAGTTTTGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	47196635	47178348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
ENSMUSG00000021377.16_47238910_47241649_1	chr13	-	864	3	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	18017	652	18017	-652	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAGTGACAGCGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	47241649	47238909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_47239556_47239900_47239970_47241500
ENSMUSG00000021377.16_47239060_47241995_1	chr13	-	757	4	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	17671	802	17671	-802	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGTTGGCATGACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	47241995	47239059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952
ENSMUSG00000021377.16_47239106_47242056_1	chr13	-	772	4	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	17610	848	17610	-848	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGATGACCGAGTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	47242056	47239105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952
ENSMUSG00000021377.16_47239173_47242091_1	chr13	-	740	4	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	17575	915	17575	-915	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGAATACGCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	47242091	47239172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952
ENSMUSG00000021377.16_47239408_47252892_1	chr13	-	768	6	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	6774	1150	6774	-1150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTATTTTCTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	47252892	47239407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818
ENSMUSG00000021377.16_47239509_47253699_1	chr13	-	764	7	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	5967	1251	5967	-1251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGATTTTATACCAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	47253699	47239508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649
ENSMUSG00000021377.16_47239901_47255208_1	chr13	-	872	7	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	4458	1643	4458	-1643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATATTTCTTTCCTATA	NA	NA	NA	NA	NA	NA	NA	NA	47255208	47239900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098
ENSMUSG00000021377.16_47241586_47255506_1	chr13	-	776	7	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	4160	3328	4160	-3328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATGAAGAGCTAAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	47255506	47241585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448
ENSMUSG00000021377.16_47251631_47259630_1	chr13	-	865	7	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	36	13373	36	-13373	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTGTTTTAAGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	47259630	47251630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
ENSMUSG00000021384.15_49390900_49394094_1	chr13	-	418	4	NNC	ENSMUSG00000021384.15	novel	456	4	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTTACCCTAGTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	49394094	49390899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_49390930_49390984_49391089_49392264_49392413_49393958
ENSMUSG00000021384.15_49390900_49394094_2	chr13	-	423	4	FSM	ENSMUSG00000021384.15	ENST00000375469.5	456	4	33	0	33	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTTACCCTAGTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	49394094	49390899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_49390935_49390984_49391089_49392264_49392413_49393958
ENSMUSG00000021384.15_49390900_49394150_1	chr13	-	479	4	FSM	ENSMUSG00000021384.15	ENST00000375472.8	479	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTTACCCTAGTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	49394150	49390899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_49390935_49390984_49391089_49392264_49392413_49393958
ENSMUSG00000021384.15_49390985_49394150_1	chr13	-	436	3	NNC	ENSMUSG00000021384.15	novel	479	4	NA	NA	0	-85	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGCAATGGTGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	49394150	49390984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_49391089_49392264_49392413_49393966
ENSMUSG00000021390.7_49761522_49762702_1	chr13	+	468	2	ISM	ENSMUSG00000021390.7	ENST00000262551.8	1698	7	-20	14153	0	-14153	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGACACAGCAAGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	49761521	49762702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49761679_49762391
ENSMUSG00000021390.7_49761522_49764869_1	chr13	+	419	3	ISM	ENSMUSG00000021390.7	ENSMUST00000021822.7	2566	7	0	13108	0	-11986	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATGAACAATCTATC	NA	NA	NA	NA	NA	NA	NA	NA	49761521	49764869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49761603_49762589_49762834_49764775
ENSMUSG00000021390.7_49762692_49771614_1	chr13	+	441	4	ISM	ENSMUSG00000021390.7	ENST00000262551.8	1698	7	1150	5241	1150	-5241	internal_fragment	FALSE	canonical	NA	NA	NA	NA	895	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGATGGGACTTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	49762691	49771614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49762834_49764775_49764870_49769030_49769190_49771568
ENSMUSG00000021390.7_49762768_49771645_1	chr13	+	396	4	ISM	ENSMUSG00000021390.7	ENST00000262551.8	1698	7	1226	5210	1226	-5210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAAGAACTTACACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	49762767	49771645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49762834_49764775_49764870_49769030_49769190_49771568
ENSMUSG00000021390.7_49762807_49771708_1	chr13	+	420	4	ISM	ENSMUSG00000021390.7	ENST00000262551.8	1698	7	1265	5147	1265	-5147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTACTTAATGCCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	49762806	49771708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49762834_49764775_49764870_49769030_49769190_49771568
ENSMUSG00000021390.7_49769048_49776312_1	chr13	+	465	4	ISM	ENSMUSG00000021390.7	ENST00000262551.8	1698	7	7506	543	7506	-543	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	933	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATACATTCTGCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	49769047	49776312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49769190_49771568_49771772_49774488_49774585_49776288
ENSMUSG00000021390.7_49769113_49776354_1	chr13	+	442	4	ISM	ENSMUSG00000021390.7	ENST00000262551.8	1698	7	7571	501	7571	-501	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCGAATTGAAGAGATTCG	NA	NA	NA	NA	NA	NA	NA	NA	49769112	49776354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49769190_49771568_49771772_49774488_49774585_49776288
ENSMUSG00000021390.7_49769159_49776411_1	chr13	+	453	4	ISM	ENSMUSG00000021390.7	ENST00000262551.8	1698	7	7617	444	7617	-444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	944	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTTTTATCTGCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	49769158	49776411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49769190_49771568_49771772_49774488_49774585_49776288
ENSMUSG00000021390.7_49771631_49776403_1	chr13	+	352	3	ISM	ENSMUSG00000021390.7	ENST00000262551.8	1698	7	10089	452	10089	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATCCAAACAGTTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	49771630	49776403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49771772_49774488_49774585_49776288
ENSMUSG00000021390.7_49774489_49776570_1	chr13	+	378	2	ISM	ENSMUSG00000021390.7	ENST00000262551.8	1698	7	12947	285	12947	-285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGTGTCCAAAATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	49774488	49776570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49774585_49776288
ENSMUSG00000021395.12_51254916_51303177_1	chr13	+	1029	6	FSM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	0	3405	0	-3405	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGTGAAAACATCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	51254915	51303177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_51255027_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ENSMUSG00000021395.12_51277162_51303285_1	chr13	+	988	5	ISM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	22246	3297	22246	-3297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTAGATGTCCCTGCGAA	NA	NA	NA	NA	NA	NA	NA	NA	51277161	51303285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ENSMUSG00000021395.12_51277223_51303363_1	chr13	+	1005	5	ISM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	22307	3219	22307	-3219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCATCTGTGAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	51277222	51303363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ENSMUSG00000021395.12_51277279_51303411_1	chr13	+	997	5	ISM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	22363	3171	22363	-3171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGTCTTCCCTCTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	51277278	51303411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ENSMUSG00000021395.12_51293479_51303589_1	chr13	+	994	3	ISM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	38563	2993	38563	-2993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGAGAGATTATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	51293478	51303589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_51293647_51298337_51298572_51302997
ENSMUSG00000021395.12_51293548_51303648_1	chr13	+	984	3	ISM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	38632	2934	38632	-2934	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATATATTATACACACAC	NA	NA	NA	NA	NA	NA	NA	NA	51293547	51303648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_51293647_51298337_51298572_51302997
ENSMUSG00000021395.12_51298374_51303789_1	chr13	+	990	2	ISM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	43458	2793	43458	-2793	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATTAAATTTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	51298373	51303789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_51298572_51302997
ENSMUSG00000021395.12_51298485_51303909_1	chr13	+	999	2	ISM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	43569	2673	43569	-2673	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACAGTCAATGACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	51298484	51303909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_51298572_51302997
ENSMUSG00000021400.9_32986656_32990856_1	chr13	+	679	3	ISM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	635	15736	635	-15736	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAAGCTTCCAGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	32986655	32990856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_32987028_32989320_32989513_32990741
ENSMUSG00000021400.9_32986711_32990903_1	chr13	+	671	3	ISM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	690	15689	690	-15689	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAACTCACTGGGAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	32986710	32990903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_32987028_32989320_32989513_32990741
ENSMUSG00000021400.9_32986760_32990957_1	chr13	+	676	3	ISM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	739	15635	739	-15635	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACAGCAGCAACTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	32986759	32990957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_32987028_32989320_32989513_32990741
ENSMUSG00000021400.9_32986866_33000318_1	chr13	+	679	4	ISM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	845	6274	845	-6274	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAACTGGCAGTGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	32986865	33000318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_32987028_32989320_32989513_32990741_32990984_33000235
ENSMUSG00000021400.9_32986923_33000369_1	chr13	+	673	4	ISM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	902	6223	902	-6223	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCGGTCAAACCTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	32986922	33000369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_32987028_32989320_32989513_32990741_32990984_33000235
ENSMUSG00000021400.9_32986973_33000421_1	chr13	+	675	4	ISM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	952	6171	952	-6171	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAGGCCTACAGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	32986972	33000421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_32987028_32989320_32989513_32990741_32990984_33000235
ENSMUSG00000021400.9_32989407_33004302_1	chr13	+	679	4	ISM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	3386	2290	3386	-2290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCCACTCTATGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	32989406	33004302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_32989513_32990741_32990984_33000235_33000466_33004201
ENSMUSG00000021400.9_32990740_33005101_1	chr13	+	710	4	ISM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	4719	1491	4719	-1491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGATACCAGCTCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	32990739	33005101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_32990984_33000235_33000466_33004201_33004358_33005021
ENSMUSG00000021400.9_32990933_33005948_1	chr13	+	599	5	ISM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	4912	644	4912	-644	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTGCGGAGTCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	32990932	33005948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_32990984_33000235_33000466_33004201_33004358_33005021_33005102_33005866
ENSMUSG00000021400.9_33004200_33006300_1	chr13	+	672	3	ISM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	18179	292	18179	-292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAAATTGTGTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	33004199	33006300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_33004358_33005021_33005102_33005866
ENSMUSG00000021400.9_33004245_33006363_1	chr13	+	690	3	ISM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	18224	229	18224	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGCAATTAAGTAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	33004244	33006363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_33004358_33005021_33005102_33005866
ENSMUSG00000021400.9_33004301_33006421_1	chr13	+	692	3	ISM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	18280	171	18280	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCATTTCAAAATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	33004300	33006421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_33004358_33005021_33005102_33005866
ENSMUSG00000021403.4_33211399_33223758_1	chr13	+	1144	7	FSM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	0	2109	0	-2109	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGTAGTGGAGGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	33211398	33223758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_33211584_33213434_33213613_33216898_33217037_33217509_33217628_33219498_33219642_33221954_33222111_33223532
ENSMUSG00000021403.4_33211534_33223873_1	chr13	+	1124	7	FSM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	135	1994	135	-1994	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTTTCTTCATCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	33211533	33223873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_33211584_33213434_33213613_33216898_33217037_33217509_33217628_33219498_33219642_33221954_33222111_33223532
ENSMUSG00000021403.4_33213543_33224001_1	chr13	+	1094	6	ISM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	2144	1866	2144	-1866	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTGAGAATGGGCAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	33213542	33224001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_33213613_33216898_33217037_33217509_33217628_33219498_33219642_33221954_33222111_33223532
ENSMUSG00000021403.4_33217010_33224215_1	chr13	+	1127	5	ISM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	5611	1652	5611	-1652	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCGTACAAGTCTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	33217009	33224215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_33217037_33217509_33217628_33219498_33219642_33221954_33222111_33223532
ENSMUSG00000021403.4_33219496_33224327_1	chr13	+	1097	3	ISM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	8097	1540	8097	-1540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATTTTATTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	33219495	33224327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_33219642_33221954_33222111_33223532
ENSMUSG00000021403.4_33219543_33224381_1	chr13	+	1104	3	ISM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	8144	1486	8144	-1486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGACTGAGGATTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	33219542	33224381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_33219642_33221954_33222111_33223532
ENSMUSG00000021403.4_33219595_33224435_1	chr13	+	1106	3	ISM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	8196	1432	8196	-1432	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATATAAAGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	33219594	33224435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_33219642_33221954_33222111_33223532
ENSMUSG00000021408.16_34199227_34218195_1	chr13	+	2824	7	ISM	ENSMUSG00000021408.16	ENSMUST00000021844.15	3266	11	12881	-535	12370	535	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGCTGTAAGTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	34199226	34218195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478
ENSMUSG00000021413.10_35083164_35087355_1	chr13	+	2262	4	ISM	ENSMUSG00000021413.10	ENSMUST00000077853.5	7844	15	23879	2692	23879	-2692	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATGGTAGAGAGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	35083163	35087355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_35083207_35083813_35083966_35084346_35084434_35085375
ENSMUSG00000021417.16_35161733_35178115_1	chr13	-	1596	10	FSM	ENSMUSG00000021417.16	ENSMUST00000021854.14	1746	10	149	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	35178115	35161732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177812
ENSMUSG00000021417.16_35164235_35178115_1	chr13	-	961	8	ISM	ENSMUSG00000021417.16	ENSMUST00000171229.8	1426	10	12	2504	0	-2495	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTTAAAATGTAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	35178115	35164234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177996
ENSMUSG00000021418.16_36080695_36088434_2	chr13	-	746	6	ISM	ENSMUSG00000021418.16	ENST00000618533.4	969	7	1876	-13	1876	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTCACACCTTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	36088434	36080694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_36080909_36082547_36082683_36082797_36082997_36085995_36086092_36087670_36087740_36088401
ENSMUSG00000021418.16_36080884_36090311_1	chr13	-	794	7	FSM	ENSMUSG00000021418.16	ENST00000618533.4	969	7	-1	176	-1	-176	multi-exon	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCATGGGTCACCTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	36090311	36080883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_36080909_36082547_36082683_36082797_36082997_36085995_36086092_36087670_36087740_36088401_36088547_36090186
ENSMUSG00000021420.14_36301637_36389124_1	chr13	+	985	2	ISM	ENSMUSG00000021420.14	ENSMUST00000021857.13	2125	7	242	332443	-204	-332359	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTTTAGATGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	36301636	36389124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_36301989_36388491
ENSMUSG00000021420.14_36301863_36430413_1	chr13	+	987	4	ISM	ENSMUSG00000021420.14	ENSMUST00000021857.13	2125	7	468	291154	5	-291070	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGTGGAGAATGGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	36301862	36430413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_36301989_36388491_36389125_36416104_36416265_36430345
ENSMUSG00000021427.11_38163413_38167448_1	chr13	-	450	2	ISM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	10745	8036	10611	117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATACTCAGCAAAACGCTC	NA	NA	NA	NA	NA	NA	NA	NA	38167448	38163412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_38163783_38167368
ENSMUSG00000021427.11_38163529_38178133_1	chr13	-	1119	8	NNC	ENSMUSG00000021427.11	novel	1825	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38178133	38163528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_38163783_38167364_38167457_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ENSMUSG00000021427.11_38163529_38178133_2	chr13	-	1121	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	60	8152	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38178133	38163528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ENSMUSG00000021427.11_38163529_38178133_3	chr13	-	1112	8	NNC	ENSMUSG00000021427.11	novel	1825	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38178133	38163528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176077_38177980
ENSMUSG00000021428.10_38220994_38245409_1	chr13	+	2709	17	NNC	ENSMUSG00000021428.10	novel	2738	17	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTGCATTCTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	38220993	38245409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233127_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
ENSMUSG00000021428.10_38220994_38245409_2	chr13	+	2710	17	NNC	ENSMUSG00000021428.10	novel	2738	17	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTGCATTCTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	38220993	38245409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_38221508_38224048_38224251_38227026_38227118_38227889_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
ENSMUSG00000021428.10_38220994_38245409_3	chr13	+	2710	17	NNC	ENSMUSG00000021428.10	novel	2738	17	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTGCATTCTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	38220993	38245409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234788_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
ENSMUSG00000021428.10_38220994_38245409_4	chr13	+	2710	17	NNC	ENSMUSG00000021428.10	novel	2738	17	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTGCATTCTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	38220993	38245409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244735
ENSMUSG00000021428.10_38220994_38245409_5	chr13	+	2708	17	NNC	ENSMUSG00000021428.10	novel	2738	17	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTGCATTCTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	38220993	38245409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236342_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
ENSMUSG00000021432.16_39116461_39139873_1	chr13	-	1439	9	ISM	ENSMUSG00000021432.16	ENSMUST00000167513.3	1778	10	4632	180	4632	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACTGATTGGAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	39139873	39116460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39128475_39128631_39138084_39138207_39139624
ENSMUSG00000021432.16_39116861_39144800_1	chr13	-	1471	10	FSM	ENSMUSG00000021432.16	ENSMUST00000225432.2	2216	10	0	745	0	-580	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATTTCTCAATGTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	39144800	39116860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39128475_39128631_39138084_39138207_39139624_39139913_39144407
ENSMUSG00000021453.3_52000780_52002155_1	chr13	+	896	4	FSM	ENSMUSG00000021453.3	ENST00000375769.1	914	4	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAAGGGGGTCTGGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	52000779	52002155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_52000904_52001182_52001490_52001591_52001806_52001904
ENSMUSG00000021453.3_52000780_52002511_1	chr13	+	1005	4	NNC	ENSMUSG00000021453.3	novel	1071	4	NA	NA	18	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGCCTTTTTATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	52000779	52002511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_52000869_52001394_52001490_52001591_52001806_52001904
ENSMUSG00000021458.18_63162748_63446673_1	chr13	+	2712	15	FSM	ENSMUSG00000021458.18	ENSMUST00000091560.11	3509	15	0	797	0	-797	multi-exon	FALSE	canonical	NA	NA	NA	NA	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTTTTCTTTCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	63162747	63446673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_63163778_63180836_63181004_63208848_63209009_63215853_63216100_63304359_63304550_63318754_63318862_63338292_63338396_63338879_63338988_63347320_63347365_63357919_63357981_63387900_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525
ENSMUSG00000021458.18_63162981_63446930_1	chr13	+	2736	15	FSM	ENSMUSG00000021458.18	ENSMUST00000091560.11	3509	15	233	540	0	-540	multi-exon	FALSE	canonical	NA	NA	NA	NA	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAACACAGCGGTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	63162980	63446930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_63163778_63180836_63181004_63208848_63209009_63215853_63216100_63304359_63304550_63318754_63318862_63338292_63338396_63338879_63338988_63347320_63347365_63357919_63357981_63387900_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525
ENSMUSG00000021458.18_63163134_63447136_1	chr13	+	2789	15	FSM	ENSMUSG00000021458.18	ENSMUST00000091560.11	3509	15	386	334	153	-334	multi-exon	FALSE	canonical	NA	NA	NA	NA	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCCCAGAGTCCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	63163133	63447136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_63163778_63180836_63181004_63208848_63209009_63215853_63216100_63304359_63304550_63318754_63318862_63338292_63338396_63338879_63338988_63347320_63347365_63357919_63357981_63387900_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525
ENSMUSG00000021458.18_63163524_63447471_1	chr13	+	2734	15	FSM	ENSMUSG00000021458.18	ENSMUST00000091560.11	3509	15	776	-1	543	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTATAAAACCCACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	63163523	63447471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_63163778_63180836_63181004_63208848_63209009_63215853_63216100_63304359_63304550_63318754_63318862_63338292_63338396_63338879_63338988_63347320_63347365_63357919_63357981_63387900_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525
ENSMUSG00000021458.18_63163527_63447470_1	chr13	+	2730	15	FSM	ENSMUSG00000021458.18	ENSMUST00000091560.11	3509	15	779	0	546	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTATAAAACCCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	63163526	63447470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_63163778_63180836_63181004_63208848_63209009_63215853_63216100_63304359_63304550_63318754_63318862_63338292_63338396_63338879_63338988_63347320_63347365_63357919_63357981_63387900_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525
ENSMUSG00000021458.18_63163715_63208914_1	chr13	+	290	3	ISM	ENSMUSG00000021458.18	ENSMUST00000021911.15	2979	16	734	241184	734	-238556	5prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGCTGGACAGAAATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	63163714	63208914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_63163778_63180836_63181004_63208854
ENSMUSG00000021458.18_63180948_63215922_1	chr13	+	282	3	ISM	ENSMUSG00000021458.18	ENSMUST00000021911.15	2979	16	17967	234176	17967	-231548	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATTCCTTATCGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	63180947	63215922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_63181004_63208854_63209025_63215866
ENSMUSG00000021460.18_52989155_53083494_1	chr13	-	1030	9	FSM	ENSMUSG00000021460.18	ENST00000303617.5	1149	9	83	36	83	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAGTTATACCAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	53083494	52989154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53073036_53073125_53073234_53073303_53083490
ENSMUSG00000021460.18_52989420_53073268_1	chr13	-	814	9	ISM	ENSMUSG00000021460.18	ENSMUST00000021913.16	1320	10	10429	265	10309	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGTTCTCACTACACCC	NA	NA	NA	NA	NA	NA	NA	NA	53073268	52989419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234
ENSMUSG00000021460.18_52989564_53083543_1	chr13	-	757	10	FSM	ENSMUSG00000021460.18	ENSMUST00000021913.16	1320	10	154	409	34	-409	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTCTTCTTGCTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	53083543	52989563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234_53073303_53083490
ENSMUSG00000021460.18_52993592_53083684_1	chr13	-	828	8	ISM	ENSMUSG00000021460.18	ENSMUST00000021913.16	1320	10	13	4437	4	-4437	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCTGATGGGGAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	53083684	52993591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234_53073303_53083490
ENSMUSG00000021460.18_53061081_53073114_1	chr13	-	2349	2	ISM	ENSMUSG00000021460.18	ENSMUST00000119311.8	2627	4	10576	0	10463	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGGCTGCTCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	53073114	53061080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_53063352_53073036
ENSMUSG00000021460.18_53061384_53083684_1	chr13	-	2318	4	FSM	ENSMUSG00000021460.18	ENSMUST00000119311.8	2627	4	6	303	4	-303	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGGAAGGTTCCTTCACG	NA	NA	NA	NA	NA	NA	NA	NA	53083684	53061383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_53063352_53073036_53073125_53073234_53073303_53083490
ENSMUSG00000021466.13_63692673_63721500_1	chr13	-	1317	5	FSM	ENSMUSG00000021466.13	ENST00000468211.6	1251	5	1	-67	1	67	multi-exon	FALSE	canonical	NA	NA	NA	NA	2679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAACAGTTCTGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	63721500	63692672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63720905
ENSMUSG00000021466.13_63692673_63721500_2	chr13	-	1310	5	NNC	ENSMUSG00000021466.13	novel	1251	5	NA	NA	1	67	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAACAGTTCTGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	63721500	63692672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_63692935_63693050_63693121_63695809_63696000_63711436_63711630_63720905
ENSMUSG00000021466.13_63692673_63721500_3	chr13	-	1310	5	NNC	ENSMUSG00000021466.13	novel	1251	5	NA	NA	1	67	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAACAGTTCTGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	63721500	63692672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_63692942_63693050_63693121_63695809_63696000_63711443_63711630_63720905
ENSMUSG00000021466.13_63692673_63721500_4	chr13	-	1311	5	NNC	ENSMUSG00000021466.13	novel	1251	5	NA	NA	1	67	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2052	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAACAGTTCTGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	63721500	63692672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_63692942_63693050_63693121_63695809_63696000_63711436_63711624_63720905
ENSMUSG00000021466.13_63692673_63721500_5	chr13	-	1308	5	NNC	ENSMUSG00000021466.13	novel	1251	5	NA	NA	1	67	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1988	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAACAGTTCTGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	63721500	63692672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_63692942_63693050_63693121_63695818_63696000_63711436_63711630_63720905
ENSMUSG00000021468.9_53487925_53491703_1	chr13	-	223	3	ISM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	39730	1141	39730	-1141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGCTCCTGCCCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	53491703	53487924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_53488014_53489376_53489451_53491643
ENSMUSG00000021468.9_53496208_53497868_1	chr13	-	206	3	ISM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	33565	9424	33565	-9424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTATGGCTTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	53497868	53496207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_53496263_53497163_53497261_53497814
ENSMUSG00000021468.9_53527400_53531392_1	chr13	-	232	3	ISM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	41	40616	41	-40616	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACCCTGCTCTCAACTA	NA	NA	NA	NA	NA	NA	NA	NA	53531392	53527399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_53527460_53527997_53528106_53531328
ENSMUSG00000021474.10_54225888_54260960_1	chr13	+	1382	11	FSM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	0	1401	0	-1401	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTCTCTTCCCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	54225887	54260960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ENSMUSG00000021474.10_54242948_54261165_1	chr13	+	1308	9	ISM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	17060	1196	17060	-1196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCAGAAGTGAAACCATA	NA	NA	NA	NA	NA	NA	NA	NA	54242947	54261165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ENSMUSG00000021474.10_54245241_54261341_1	chr13	+	1354	8	ISM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	19353	1020	19353	-1020	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCCAACATCTCTATAGT	NA	NA	NA	NA	NA	NA	NA	NA	54245240	54261341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ENSMUSG00000021474.10_54245309_54261408_1	chr13	+	1353	8	ISM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	19421	953	19421	-953	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGCTGTTCCATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	54245308	54261408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ENSMUSG00000021474.10_54247902_54261610_1	chr13	+	1332	5	ISM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	22014	751	22014	-751	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTCTCCGCTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	54247901	54261610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ENSMUSG00000021474.10_54247939_54261681_1	chr13	+	1366	5	ISM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	22051	680	22051	-680	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTAGAGCTGCCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	54247938	54261681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ENSMUSG00000021474.10_54258819_54261822_1	chr13	+	1397	3	ISM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	32931	539	32931	-539	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAAGGACACTTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	54258818	54261822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_54258871_54259766_54259815_54260525
ENSMUSG00000021476.10_64309683_64333285_1	chr13	+	1181	5	NNC	ENSMUSG00000021476.10	novel	2564	8	NA	NA	0	-446	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCCTTTCCCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	64309682	64333285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_64310149_64317832_64317991_64329920_64330093_64332386_64332573_64333086
ENSMUSG00000021476.10_64309822_64333731_1	chr13	+	1161	6	FSM	ENSMUSG00000021476.10	ENST00000375251.7	1257	6	96	0	96	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTATGTGTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	64309821	64333731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_64310149_64317827_64317991_64329920_64330093_64332386_64332573_64333086_64333337_64333668
ENSMUSG00000021476.10_64309822_64333731_2	chr13	+	1156	6	NNC	ENSMUSG00000021476.10	novel	1257	6	NA	NA	96	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTATGTGTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	64309821	64333731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_64310149_64317832_64317991_64329920_64330093_64332386_64332573_64333086_64333337_64333668
ENSMUSG00000021476.10_64309933_64333731_1	chr13	+	1047	6	NNC	ENSMUSG00000021476.10	novel	1257	6	NA	NA	207	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTATGTGTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	64309932	64333731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_64310149_64317827_64317991_64329920_64330093_64332386_64332573_64333086_64333337_64333671
ENSMUSG00000021476.10_64309933_64333731_2	chr13	+	1048	6	NNC	ENSMUSG00000021476.10	novel	1257	6	NA	NA	207	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTATGTGTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	64309932	64333731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_64310149_64317827_64317991_64329922_64330093_64332386_64332573_64333086_64333337_64333668
ENSMUSG00000021476.10_64309933_64333731_3	chr13	+	1050	6	FSM	ENSMUSG00000021476.10	ENST00000375251.7	1257	6	207	0	207	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTATGTGTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	64309932	64333731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_64310149_64317827_64317991_64329920_64330093_64332386_64332573_64333086_64333337_64333668
ENSMUSG00000021476.10_64309933_64333731_4	chr13	+	1047	6	NNC	ENSMUSG00000021476.10	novel	1257	6	NA	NA	207	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTATGTGTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	64309932	64333731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_64310149_64317827_64317991_64329920_64330093_64332386_64332570_64333086_64333337_64333668
ENSMUSG00000021476.10_64309933_64333731_5	chr13	+	1045	6	NNC	ENSMUSG00000021476.10	novel	1257	6	NA	NA	207	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTATGTGTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	64309932	64333731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_64310149_64317832_64317991_64329920_64330093_64332386_64332573_64333086_64333337_64333668
ENSMUSG00000021476.10_64309949_64330001_1	chr13	+	756	6	ISM	ENSMUSG00000021476.10	ENSMUST00000021929.10	2564	8	266	4350	223	-3730	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACCAAAGCCTGAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	64309948	64330001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_64310149_64317827_64317991_64321876_64322036_64322603_64322673_64323818_64323903_64329920
ENSMUSG00000021476.10_64310060_64330069_1	chr13	+	713	6	ISM	ENSMUSG00000021476.10	ENSMUST00000021929.10	2564	8	377	4282	334	-3662	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGTCCAGATACAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	64310059	64330069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_64310149_64317827_64317991_64321876_64322036_64322603_64322673_64323818_64323903_64329920
ENSMUSG00000021476.10_64317862_64332540_1	chr13	+	767	6	ISM	ENSMUSG00000021476.10	ENSMUST00000021929.10	2564	8	8179	1811	8136	-1191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGAACTATGGCCCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	64317861	64332540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_64317991_64321876_64322036_64322603_64322673_64323818_64323903_64329920_64330093_64332386
ENSMUSG00000021476.10_64321914_64333285_1	chr13	+	832	6	ISM	ENSMUSG00000021476.10	ENSMUST00000021929.10	2564	8	12231	1066	12188	-446	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCCTTTCCCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	64321913	64333285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_64322036_64322603_64322673_64323818_64323903_64329920_64330093_64332386_64332573_64333086
ENSMUSG00000021477.10_64508866_64513139_1	chr13	-	3270	2	ISM	ENSMUSG00000021477.10_ENSMUSG00000114072.2	ENSMUST00000021933.8	1971	8	4981	-2162	-3588	291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAACCCTTCTGTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	64513139	64508865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_64512015_64513018
ENSMUSG00000021477.10_64509157_64514906_1	chr13	-	3364	4	ISM	ENSMUSG00000021477.10_ENSMUSG00000114072.2	ENSMUST00000021933.8	1971	8	3214	-1871	3214	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1629	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACAAGCAACAAAATCACT	NA	NA	NA	NA	NA	NA	NA	NA	64514906	64509156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681
ENSMUSG00000021477.10_64509914_64518615_1	chr13	-	3316	9	FSM	ENSMUSG00000021477.10	ENSMUST00000222517.2	6168	9	89	2763	89	1114	multi-exon	FALSE	canonical	NA	NA	NA	NA	5164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTATGTGTTTGCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	64518615	64509913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049_64518335_64518598
ENSMUSG00000021477.10_64510006_64518704_1	chr13	-	3313	9	FSM	ENSMUSG00000021477.10	ENSMUST00000222517.2	6168	9	0	2855	0	1022	multi-exon	FALSE	canonical	NA	NA	NA	NA	5051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGATCTTACCTTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	64518704	64510005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049_64518335_64518598
ENSMUSG00000021477.10_64511028_64515963_1	chr13	-	1674	6	ISM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	2157	0	2157	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCAAGTCTCATATCTG	NA	NA	NA	NA	NA	NA	NA	NA	64515963	64511027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929
ENSMUSG00000021477.10_64511028_64516052_1	chr13	-	1763	6	ISM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	2068	0	2068	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCAAGTCTCATATCTG	NA	NA	NA	NA	NA	NA	NA	NA	64516052	64511027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929
ENSMUSG00000021477.10_64511233_64516903_1	chr13	-	1620	7	ISM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	1217	205	1217	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATACTACAAAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	64516903	64511232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841
ENSMUSG00000021477.10_64511350_64518120_1	chr13	-	1649	8	FSM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	0	322	0	-322	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGGTTGTCAGGCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	64518120	64511349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
ENSMUSG00000021481.12_55253145_55278442_1	chr13	+	275	2	NNC	ENSMUSG00000021481.12	novel	282	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAAGTCCTTCGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	55253144	55278442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_55253332_55278354
ENSMUSG00000021481.12_55253145_55278442_2	chr13	+	283	2	FSM	ENSMUSG00000021481.12	ENST00000512315.5	282	2	-1	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAAGTCCTTCGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	55253144	55278442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_55253332_55278346
ENSMUSG00000021482.11_64439123_64445106_1	chr13	-	958	2	ISM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	15418	1512	15418	-1491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTTAAAAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	64445106	64439122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_64440043_64445068
ENSMUSG00000021482.11_64439249_64456673_1	chr13	-	964	3	ISM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	3851	1638	3851	-1617	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAAAGGTCCTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	64456673	64439248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_64440043_64445068_64445201_64456635
ENSMUSG00000021482.11_64439435_64460357_1	chr13	-	1020	6	FSM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	167	1824	167	-1803	multi-exon	TRUE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAAGAAATACATATGT	NA	NA	NA	NA	NA	NA	NA	NA	64460357	64439434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ENSMUSG00000021482.11_64439641_64460524_1	chr13	-	981	6	FSM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	0	2030	0	-2009	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAAGGGGGCGCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	64460524	64439640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ENSMUSG00000021483.9_64580392_64586794_1	chr13	+	869	6	NNC	ENSMUSG00000021483.9	novel	856	6	NA	NA	-18	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTCCAGGCCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	64580391	64586794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_64580485_64580790_64580909_64583940_64584121_64584306_64584429_64585690_64585847_64586594
ENSMUSG00000021483.9_64580392_64586794_2	chr13	+	874	6	FSM	ENSMUSG00000021483.9	ENST00000375871.8	856	6	-18	0	-18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTCCAGGCCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	64580391	64586794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64585690_64585847_64586594
ENSMUSG00000021483.9_64580392_64586794_3	chr13	+	865	6	NNC	ENSMUSG00000021483.9	novel	856	6	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1871	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTCCAGGCCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	64580391	64586794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_64580485_64580790_64580905_64583931_64584121_64584315_64584429_64585690_64585847_64586594
ENSMUSG00000021483.9_64580392_64586794_4	chr13	+	872	6	NNC	ENSMUSG00000021483.9	novel	856	6	NA	NA	-18	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	1888	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTCCAGGCCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	64580391	64586794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64585690_64585847_64586596
ENSMUSG00000021483.9_64584367_64585246_1	chr13	+	106	2	ISM	ENSMUSG00000021483.9	ENST00000375883.7	980	7	3957	1548	3957	-1548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCCCGGGCGAAAACGAC	NA	NA	NA	NA	NA	NA	NA	NA	64584366	64585246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_64584429_64585202
ENSMUSG00000021484.9_55494406_55496143_1	chr13	-	461	2	ISM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	14453	2760	14453	-2760	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTAGGGTTCCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	55496143	55494405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55494851_55496127
ENSMUSG00000021484.9_55494578_55499009_1	chr13	-	434	3	ISM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	11587	2932	11587	-2932	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAAGTATTTTCATACA	NA	NA	NA	NA	NA	NA	NA	NA	55499009	55494577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55494851_55496127_55496248_55498968
ENSMUSG00000021484.9_55494776_55499327_1	chr13	-	445	4	ISM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	11269	3130	11269	-3130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCACTCCTGGGCGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	55499327	55494775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192
ENSMUSG00000021484.9_55498969_55500814_1	chr13	-	413	4	ISM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	9782	7323	9782	-7323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGTGTGAAAGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	55500814	55498968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55499084_55499192_55499355_55499523_55499604_55500758
ENSMUSG00000021484.9_55499023_55509995_1	chr13	-	483	5	ISM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	601	7377	601	-7377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCCCACTGGCTACTAC	NA	NA	NA	NA	NA	NA	NA	NA	55509995	55499022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933
ENSMUSG00000021484.9_55499189_55510052_1	chr13	-	483	4	ISM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	544	7543	544	-7543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCCTAAGGGGGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	55510052	55499188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55499355_55499523_55499604_55500758_55500877_55509933
ENSMUSG00000021484.9_55499310_55510264_1	chr13	-	426	5	ISM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	332	7664	332	-7664	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGTACGATCATAGCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	55510264	55499309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ENSMUSG00000021484.9_55499591_55510424_1	chr13	-	474	4	ISM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	172	7945	172	-7945	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAGACAACTTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	55510424	55499590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55499604_55500758_55500877_55509933_55510053_55510200
ENSMUSG00000021485.15_55472981_55476297_1	chr13	-	1030	3	ISM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	1274	0	1274	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGTACAGTCTATCACC	NA	NA	NA	NA	NA	NA	NA	NA	55476297	55472980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55473712_55473825_55474010_55476182
ENSMUSG00000021485.15_55472981_55476456_1	chr13	-	1060	4	ISM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	1115	0	1115	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGTACAGTCTATCACC	NA	NA	NA	NA	NA	NA	NA	NA	55476456	55472980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426
ENSMUSG00000021485.15_55473102_55477165_1	chr13	-	1023	5	ISM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	406	121	406	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGACTCCAGAACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	55477165	55473101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081
ENSMUSG00000021485.15_55473147_55477165_1	chr13	-	978	5	ISM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	406	166	406	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGAGTGTGTGACGTGC	NA	NA	NA	NA	NA	NA	NA	NA	55477165	55473146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081
ENSMUSG00000021485.15_55473165_55477165_1	chr13	-	949	4	NNC	ENSMUSG00000021485.15	novel	1327	6	NA	NA	406	-184	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTCCTGATGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	55477165	55473164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_55473712_55473825_55474010_55476182_55476298_55477062
ENSMUSG00000021485.15_55473300_55477546_1	chr13	-	972	5	NNC	ENSMUSG00000021485.15	novel	1327	6	NA	NA	25	-319	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTAAGTTCCTGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	55477546	55473299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_55473712_55473825_55474010_55476182_55476298_55477062_55477188_55477410
ENSMUSG00000021485.15_55473300_55477546_2	chr13	-	983	6	FSM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	25	319	25	-319	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTAAGTTCCTGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	55477546	55473299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081_55477188_55477410
ENSMUSG00000021486.8_55469500_55470763_1	chr13	+	693	2	ISM	ENSMUSG00000021486.8	ENST00000503216.5	752	5	-364	2014	-364	-2014	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGCAGAGCGACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	55469499	55470763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55470095_55470665
ENSMUSG00000021486.8_55469626_55470862_1	chr13	+	665	2	NNC	ENSMUSG00000021486.8	novel	2644	5	NA	NA	-238	-1915	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAACATCAACCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	55469625	55470862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_55470095_55470666
ENSMUSG00000021486.8_55469696_55472222_1	chr13	+	704	3	ISM	ENSMUSG00000021486.8	ENST00000503216.5	752	5	-168	555	-168	-555	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTAGCTTATTTGGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	55469695	55472222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55470095_55470665_55470892_55472143
ENSMUSG00000021486.8_55469832_55472429_1	chr13	+	693	4	ISM	ENSMUSG00000021486.8	ENST00000503216.5	752	5	-32	348	-32	-348	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACTGTGTCAGGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	55469831	55472429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339
ENSMUSG00000021486.8_55469941_55472777_1	chr13	+	708	5	FSM	ENSMUSG00000021486.8	ENSMUST00000021942.8	2644	5	1628	308	77	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTATAACTCGCTTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	55469940	55472777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472642
ENSMUSG00000021486.8_55470753_55472695_1	chr13	+	352	4	ISM	ENSMUSG00000021486.8	ENST00000503216.5	752	5	889	82	889	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGGAGACCGCACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	55470752	55472695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55470892_55472143_55472258_55472339_55472419_55472675
ENSMUSG00000021486.8_55470804_55473085_1	chr13	+	719	4	NNC	ENSMUSG00000021486.8	novel	2644	5	NA	NA	940	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1027	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGAGTCAGATAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	55470803	55473085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_55470892_55472143_55472258_55472339_55472419_55472647
ENSMUSG00000021486.8_55470806_55473085_1	chr13	+	722	4	ISM	ENSMUSG00000021486.8	ENSMUST00000021942.8	2644	5	2493	0	942	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGAGTCAGATAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	55470805	55473085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55470892_55472143_55472258_55472339_55472419_55472642
ENSMUSG00000021486.8_55470811_55472745_1	chr13	+	344	4	ISM	ENSMUSG00000021486.8	ENST00000503216.5	752	5	947	32	947	-32	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGCCGCCACCAAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	55470810	55472745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55470892_55472143_55472258_55472339_55472419_55472675
ENSMUSG00000021493.16_55646229_55647034_1	chr13	-	556	3	ISM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	14225	0	14213	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTCTGTGCCTCCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	55647034	55646228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55646548_55646706_55646823_55646913
ENSMUSG00000021493.16_55646344_55652552_1	chr13	-	523	4	ISM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	8707	115	8695	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGTTCCCTCTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	55652552	55646343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470
ENSMUSG00000021493.16_55646486_55653807_1	chr13	-	541	5	ISM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	7452	257	7440	-257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACGCCTTCTCTCACG	NA	NA	NA	NA	NA	NA	NA	NA	55653807	55646485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746
ENSMUSG00000021493.16_55646914_55654180_1	chr13	-	599	4	ISM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	7079	685	7067	-685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCGGTTGCCCAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	55654180	55646913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55647035_55652470_55652652_55653746_55653982_55654118
ENSMUSG00000021493.16_55652549_55655395_1	chr13	-	532	5	ISM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	5864	6320	5852	2037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTATCTTTTGCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	55655395	55652548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55652652_55653746_55653982_55654118_55654181_55655142_55655180_55655300
ENSMUSG00000021493.16_55652636_55656059_1	chr13	-	526	6	ISM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	5200	6407	5188	1950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGGGCCACGCATACCA	NA	NA	NA	NA	NA	NA	NA	NA	55656059	55652635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55652652_55653746_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020
ENSMUSG00000021493.16_55653862_55656721_1	chr13	-	523	7	ISM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	4538	7633	4526	724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGCCTCTGCAGAACCGC	NA	NA	NA	NA	NA	NA	NA	NA	55656721	55653861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704
ENSMUSG00000021493.16_55653889_55656833_1	chr13	-	608	7	ISM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	4426	7660	4414	697	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCGGCACAGCCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	55656833	55653888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704
ENSMUSG00000021493.16_55653966_55656834_1	chr13	-	532	7	ISM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	4425	7737	4413	620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACCAGCCGCCCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	55656834	55653965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704
ENSMUSG00000021493.16_55654157_55660149_1	chr13	-	525	7	ISM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	1110	7928	1098	429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCAGCCTCAACTATAC	NA	NA	NA	NA	NA	NA	NA	NA	55660149	55654156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55654181_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124
ENSMUSG00000021493.16_55654587_55660169_1	chr13	-	865	6	NNC	ENSMUSG00000021493.16	novel	1006	8	NA	NA	1078	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGCCTCTGTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	55660169	55654586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_55654937_55655142_55655180_55655300_55655438_55656020_55656140_55656679_55656857_55660124
ENSMUSG00000021494.10_55678223_55683617_1	chr13	-	1756	14	ISM	ENSMUSG00000021494.10	ENSMUST00000021956.9	2205	17	854	0	854	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCTCTCACCCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	55683617	55678222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542
ENSMUSG00000021494.10_55678398_55684137_1	chr13	-	1770	16	ISM	ENSMUSG00000021494.10	ENSMUST00000224765.2	2199	17	334	169	334	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTTCTCCCCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	55684137	55678397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108
ENSMUSG00000021494.10_55678513_55684339_1	chr13	-	1783	17	FSM	ENSMUSG00000021494.10	ENSMUST00000224765.2	2199	17	132	284	132	-284	multi-exon	FALSE	canonical	NA	NA	NA	NA	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCATCGGATCACTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	55684339	55678512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ENSMUSG00000021495.11_55687132_55691020_1	chr13	-	992	4	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	27893	3	27893	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	55691020	55687131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596
ENSMUSG00000021495.11_55687132_55691133_1	chr13	-	1105	4	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	27780	3	27780	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	55691133	55687131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596
ENSMUSG00000021495.11_55687308_55691280_1	chr13	-	1076	4	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	27633	179	27633	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTGTGAGCCAAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	55691280	55687307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596
ENSMUSG00000021495.11_55687329_55691206_1	chr13	-	981	4	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	27707	200	27707	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGAGCCCGGGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	55691206	55687328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596
ENSMUSG00000021495.11_55689492_55691458_1	chr13	-	981	3	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	27455	2363	27455	-2363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACTGGACCAACTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	55691458	55689491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55689535_55690394_55690471_55690596
ENSMUSG00000021495.11_55690689_55698093_1	chr13	-	971	2	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	20820	3560	20820	-3560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGGTCCAGCAAGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	55698093	55690688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55691603_55698036
ENSMUSG00000021495.11_55690742_55698150_1	chr13	-	975	2	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	20763	3613	20763	-3613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGCCAGGTGGGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	55698150	55690741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55691603_55698036
ENSMUSG00000021495.11_55690796_55698206_1	chr13	-	977	2	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	20707	3667	20707	-3667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCAATTCAGGCTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	55698206	55690795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55691603_55698036
ENSMUSG00000021495.11_55691233_55702116_1	chr13	-	1029	4	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	16797	4104	16797	-4104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGTCCCACCTTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	55702116	55691232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55691603_55698036_55698221_55700774_55701163_55702029
ENSMUSG00000021495.11_55691450_55703818_1	chr13	-	980	5	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	15095	4321	15095	-4321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATCAAGAGCACTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	55703818	55691449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55691603_55698036_55698221_55700774_55701163_55702029_55702262_55703795
ENSMUSG00000021495.11_55691481_55703890_1	chr13	-	1021	5	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	15023	4352	15023	-4352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCAATAGCTTCTTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	55703890	55691480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55691603_55698036_55698221_55700774_55701163_55702029_55702262_55703795
ENSMUSG00000021495.11_55691551_55703921_1	chr13	-	982	5	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	14992	4422	14992	-4422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGGAAGCCAGGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	55703921	55691550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55691603_55698036_55698221_55700774_55701163_55702029_55702262_55703795
ENSMUSG00000021495.11_55698036_55704038_1	chr13	-	1048	4	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	14875	10907	14875	-10907	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGCCTGCCTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	55704038	55698035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55698221_55700774_55701163_55702029_55702262_55703795
ENSMUSG00000021495.11_55698161_55718659_1	chr13	-	995	5	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	254	11032	254	-11032	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGTCTGGGCGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	55718659	55698160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55718587
ENSMUSG00000021495.11_55700880_55718802_1	chr13	-	973	4	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	111	13751	111	-13751	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTCTCGGGGTGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	55718802	55700879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55701163_55702029_55702262_55703795_55704039_55718587
ENSMUSG00000021495.11_55700936_55718913_1	chr13	-	1028	4	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	0	13807	0	-13807	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTCAGAGCCCTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	55718913	55700935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55701163_55702029_55702262_55703795_55704039_55718587
ENSMUSG00000021497.11_55862463_55874040_1	chr13	+	1521	5	NNC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAAGTGGTTTCGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55862462	55874040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_55862658_55865604_55866081_55869391_55869556_55872320_55872452_55873485
ENSMUSG00000021497.11_55862463_55874040_2	chr13	+	1520	5	NNC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAAGTGGTTTCGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55862462	55874040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_55862658_55865604_55866074_55869391_55869556_55872320_55872452_55873479
ENSMUSG00000021497.11_55862463_55874040_3	chr13	+	1521	5	NNC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAAGTGGTTTCGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55862462	55874040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_55862658_55865610_55866081_55869391_55869556_55872320_55872452_55873479
ENSMUSG00000021500.18_55785960_55800788_1	chr13	+	804	7	ISM	ENSMUSG00000021500.18	ENST00000354283.8	3313	22	122	26089	122	-26089	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTTCTAGAGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	55785959	55800788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725
ENSMUSG00000021500.18_55787697_55801470_1	chr13	+	802	7	ISM	ENSMUSG00000021500.18	ENST00000354283.8	3313	22	1859	25407	1859	-25407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGAAACCAATTAAATCATG	NA	NA	NA	NA	NA	NA	NA	NA	55787696	55801470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414
ENSMUSG00000021500.18_55798308_55806860_1	chr13	+	799	7	ISM	ENSMUSG00000021500.18	ENST00000354283.8	3313	22	12470	20017	12470	-20017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTTTGCACACCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	55798307	55806860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832
ENSMUSG00000021500.18_55799913_55808568_1	chr13	+	761	7	ISM	ENSMUSG00000021500.18	ENST00000354283.8	3313	22	14075	18309	14075	-18309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGATGAAGCAGACAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	55799912	55808568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529
ENSMUSG00000021500.18_55800774_55811109_1	chr13	+	777	7	ISM	ENSMUSG00000021500.18	ENST00000354283.8	3313	22	14936	15768	14936	-15768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGCCCGCAGGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	55800773	55811109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031
ENSMUSG00000021500.18_55801413_55811614_1	chr13	+	771	7	ISM	ENSMUSG00000021500.18	ENST00000354283.8	3313	22	15575	15263	15575	-15263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTGAAATTGCTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	55801412	55811614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591
ENSMUSG00000021500.18_55801471_55811670_1	chr13	+	769	7	ISM	ENSMUSG00000021500.18	ENST00000354283.8	3313	22	15633	15207	15633	-15207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGTGGATAAGCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	55801470	55811670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591
ENSMUSG00000021500.18_55801817_55814013_1	chr13	+	802	7	ISM	ENSMUSG00000021500.18	ENST00000354283.8	3313	22	15979	12864	15979	-12864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGGGACAGTATCATAAA	NA	NA	NA	NA	NA	NA	NA	NA	55801816	55814013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999
ENSMUSG00000021500.18_55801884_55814063_1	chr13	+	785	7	ISM	ENSMUSG00000021500.18	ENST00000354283.8	3313	22	16046	12814	16046	-12814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGCCACATCTGTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	55801883	55814063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999
ENSMUSG00000021500.18_55801948_55814109_1	chr13	+	767	7	ISM	ENSMUSG00000021500.18	ENST00000354283.8	3313	22	16110	12768	16110	-12768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTGTAGTGAATTACAG	NA	NA	NA	NA	NA	NA	NA	NA	55801947	55814109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999
ENSMUSG00000021500.18_55802900_55817554_1	chr13	+	758	7	ISM	ENSMUSG00000021500.18	ENST00000354283.8	3313	22	17062	9323	17062	-9323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTCGATATGCTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	55802899	55817554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524
ENSMUSG00000021500.18_55806831_55817663_1	chr13	+	825	6	ISM	ENSMUSG00000021500.18	ENST00000354283.8	3313	22	20993	9214	20993	-9214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTTAAACTTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	55806830	55817663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524
ENSMUSG00000021500.18_55808567_55818095_1	chr13	+	785	6	ISM	ENSMUSG00000021500.18	ENST00000354283.8	3313	22	22729	8782	22729	-8782	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGAGGAAAAAGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	55808566	55818095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016
ENSMUSG00000021500.18_55811116_55821831_1	chr13	+	804	6	ISM	ENSMUSG00000021500.18	ENST00000354283.8	3313	22	25278	5046	25278	-5046	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGCGCCCACTGCAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	55811115	55821831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753
ENSMUSG00000021500.18_55811702_55823747_1	chr13	+	751	6	ISM	ENSMUSG00000021500.18	ENSMUST00000223736.2	5612	24	28838	5322	25864	-3130	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTATCCTGGCTCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	55811701	55823747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708
ENSMUSG00000021500.18_55811731_55823821_1	chr13	+	796	6	ISM	ENSMUSG00000021500.18	ENSMUST00000223736.2	5612	24	28867	5248	25893	-3056	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTACGTGCCTTTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	55811730	55823821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708
ENSMUSG00000021500.18_55814148_55824630_1	chr13	+	778	6	ISM	ENSMUSG00000021500.18	ENSMUST00000223736.2	5612	24	31284	4439	28310	-2247	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACTCTGAGGCCGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	55814147	55824630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582
ENSMUSG00000021500.18_55817577_55825368_1	chr13	+	812	6	ISM	ENSMUSG00000021500.18	ENSMUST00000223736.2	5612	24	34713	3701	31739	-1509	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATCACCAGGCTCATAAA	NA	NA	NA	NA	NA	NA	NA	NA	55817576	55825368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333
ENSMUSG00000021500.18_55818068_55826658_1	chr13	+	776	6	ISM	ENSMUSG00000021500.18	ENSMUST00000223736.2	5612	24	35204	2411	32230	-219	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTACCTTTGCTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	55818067	55826658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ENSMUSG00000021500.18_55818124_55826738_1	chr13	+	800	6	ISM	ENSMUSG00000021500.18	ENSMUST00000223736.2	5612	24	35260	2331	32286	-139	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAAACCAGTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	55818123	55826738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ENSMUSG00000021500.18_55821798_55826803_1	chr13	+	778	5	ISM	ENSMUSG00000021500.18	ENSMUST00000223736.2	5612	24	38934	2266	35960	-74	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATTAGACCTGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	55821797	55826803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ENSMUSG00000021501.5_55770818_55780224_1	chr13	+	1376	4	NNC	ENSMUSG00000021501.5	novel	1382	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGAAGTCTGTACATT	NA	NA	NA	NA	NA	NA	NA	NA	55770817	55780224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_55771070_55772523_55772985_55776389_55776456_55779627
ENSMUSG00000021501.5_55771011_55779984_1	chr13	+	488	3	FSM	ENSMUSG00000021501.5	ENST00000514518.1	759	3	50	221	50	-221	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAACCAACTAGGTTAACG	NA	NA	NA	NA	NA	NA	NA	NA	55771010	55779984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_55771070_55776389_55776456_55779621
ENSMUSG00000021501.5_55771011_55780052_1	chr13	+	556	3	FSM	ENSMUSG00000021501.5	ENST00000514518.1	759	3	50	153	50	-153	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTCTAATGTCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	55771010	55780052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_55771070_55776389_55776456_55779621
ENSMUSG00000021501.5_55771011_55780224_1	chr13	+	656	2	NNC	ENSMUSG00000021501.5	novel	1382	4	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGAAGTCTGTACATT	NA	NA	NA	NA	NA	NA	NA	NA	55771010	55780224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_55771070_55779627
ENSMUSG00000021501.5_55771011_55780224_2	chr13	+	1189	4	FSM	ENSMUSG00000021501.5	ENSMUST00000021963.5	1382	4	193	0	50	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGAAGTCTGTACATT	NA	NA	NA	NA	NA	NA	NA	NA	55771010	55780224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_55771070_55772523_55772985_55776389_55776456_55779621
ENSMUSG00000021501.5_55771011_55780224_3	chr13	+	1183	4	NNC	ENSMUSG00000021501.5	novel	1382	4	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGAAGTCTGTACATT	NA	NA	NA	NA	NA	NA	NA	NA	55771010	55780224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_55771070_55772529_55772985_55776389_55776456_55779621
ENSMUSG00000021501.5_55771011_55780224_4	chr13	+	662	2	FSM	ENSMUSG00000021501.5	ENST00000676829.1	693	2	50	-19	50	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGAAGTCTGTACATT	NA	NA	NA	NA	NA	NA	NA	NA	55771010	55780224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_55771070_55779621
ENSMUSG00000021504.15_55747878_55758256_1	chr13	+	2125	6	NNC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGGCAAGGAACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	55747877	55758256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_55748006_55751838_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
ENSMUSG00000021504.15_55747878_55758256_2	chr13	+	2125	6	NNC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGGCAAGGAACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	55747877	55758256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757037
ENSMUSG00000021514.19_65426666_65451905_1	chr13	+	1412	8	FSM	ENSMUSG00000021514.19	ENSMUST00000130799.8	1580	8	38	130	38	-130	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGTGTCTAAGGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	65426665	65451905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65451631
ENSMUSG00000021518.5_67081280_67093358_1	chr13	+	489	2	ISM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	386	53107	386	-53107	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAACATCTGGAGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	67081279	67093358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_67081751_67093340
ENSMUSG00000021518.5_67081280_67093409_1	chr13	+	540	2	ISM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	386	53056	386	-53056	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGTTAGCATTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	67081279	67093409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_67081751_67093340
ENSMUSG00000021518.5_67081408_67104475_1	chr13	+	510	4	ISM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	514	41990	514	-41990	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTCCTTTTCCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	67081407	67104475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445
ENSMUSG00000021518.5_67081512_67111432_1	chr13	+	557	5	ISM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	618	35033	618	-35033	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTGCATTTGGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	67081511	67111432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376
ENSMUSG00000021518.5_67081699_67114503_1	chr13	+	523	6	ISM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	805	31962	805	-31962	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATTCTGGACATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	67081698	67114503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453
ENSMUSG00000021518.5_67101581_67120597_1	chr13	+	524	5	ISM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	20687	25868	20687	-25868	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGTTCACCCCTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	67101580	67120597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557
ENSMUSG00000021518.5_67104528_67122531_1	chr13	+	519	5	ISM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	23634	23934	23634	-23934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGCACATCTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	67104527	67122531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508
ENSMUSG00000021518.5_67111464_67124835_1	chr13	+	505	5	ISM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	30570	21630	30570	-21630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGCAAGCGTGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	67111463	67124835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809
ENSMUSG00000021518.5_67114483_67135895_1	chr13	+	522	5	ISM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	33589	10570	33589	-10570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCTTTGGCTTCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	67114482	67135895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817
ENSMUSG00000021518.5_67120661_67145060_1	chr13	+	486	7	ISM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	39767	1405	39767	-1405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAACCACGAAAGCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	67120660	67145060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
ENSMUSG00000021518.5_67122604_67145269_1	chr13	+	561	6	ISM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	41710	1196	41710	-1196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTAAGTCTTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	67122603	67145269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
ENSMUSG00000021518.5_67135890_67145418_1	chr13	+	554	4	ISM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	54996	1047	54996	-1047	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTCCCAGCTGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	67135889	67145418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_67135918_67142016_67142086_67143410_67143481_67145031
ENSMUSG00000021519.12_67060182_67065239_1	chr13	-	691	4	ISM	ENSMUSG00000021519.12	ENST00000523821.5	1349	7	13031	-5	13031	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGTTTCAATATTA	NA	NA	NA	NA	NA	NA	NA	NA	67065239	67060181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_67060489_67062690_67062853_67064676_67064749_67065089
ENSMUSG00000021519.12_67060301_67076256_1	chr13	-	783	6	ISM	ENSMUSG00000021519.12	ENST00000523821.5	1349	7	2014	114	2014	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTGCCAAAGCTTCACTA	NA	NA	NA	NA	NA	NA	NA	NA	67076256	67060300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_67060489_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233
ENSMUSG00000021519.12_67060301_67081078_1	chr13	-	1286	8	FSM	ENSMUSG00000021519.12	ENSMUST00000021991.11	1479	8	74	119	74	-114	multi-exon	FALSE	canonical	NA	NA	NA	NA	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTGCCAAAGCTTCACTA	NA	NA	NA	NA	NA	NA	NA	NA	67081078	67060300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ENSMUSG00000021519.12_67060413_67076312_1	chr13	-	727	6	ISM	ENSMUSG00000021519.12	ENST00000523821.5	1349	7	1958	226	1958	-226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGACACTTGTTTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	67076312	67060412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_67060489_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233
ENSMUSG00000021520.5_67048681_67053442_1	chr13	-	529	4	NNC	ENSMUSG00000021520.5	novel	535	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGATTATTTGAATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	67053442	67048680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_67048891_67049465_67049633_67050793_67050860_67053356
ENSMUSG00000021537.10_81932826_81940266_1	chr13	+	377	3	ISM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	1630	5008	1630	-5008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTACCTTACTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	81932825	81940266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_81932896_81934961_81935077_81940074
ENSMUSG00000021537.10_81934958_81944826_1	chr13	+	365	3	ISM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	3762	448	3762	-448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAATGTTACTTTTACCA	NA	NA	NA	NA	NA	NA	NA	NA	81934957	81944826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_81935077_81940074_81940267_81944772
ENSMUSG00000021546.19_58539053_58542510_1	chr13	-	1865	6	ISM	ENSMUSG00000021546.19	ENST00000376263.8	2723	14	5726	92	3359	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	58542510	58539052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291
ENSMUSG00000021546.19_58539151_58542517_1	chr13	-	1763	6	NNC	ENSMUSG00000021546.19	novel	2723	14	NA	NA	3352	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGGAAAAAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	58542517	58539150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291
ENSMUSG00000021546.19_58539270_58542599_1	chr13	-	1735	6	NNC	ENSMUSG00000021546.19	novel	2723	14	NA	NA	3270	-119	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	869	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTTTGTAAAAATATATAT	NA	NA	NA	NA	NA	NA	NA	NA	58542599	58539269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541875_58541974_58542123_58542179_58542291
ENSMUSG00000021546.19_58539368_58543107_1	chr13	-	1757	7	NNC	ENSMUSG00000021546.19	novel	2723	14	NA	NA	2762	-217	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTGGCTGATGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	58543107	58539367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978
ENSMUSG00000021546.19_58539368_58543534_1	chr13	-	1915	8	ISM	ENSMUSG00000021546.19	ENST00000376263.8	2723	14	4702	407	2335	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTGGCTGATGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	58543534	58539367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387
ENSMUSG00000021546.19_58539530_58543534_1	chr13	-	1742	8	NNC	ENSMUSG00000021546.19	novel	2723	14	NA	NA	2335	234	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTGTTTTTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	58543534	58539529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387
ENSMUSG00000021546.19_58539661_58542179_1	chr13	-	979	5	ISM	ENSMUSG00000021546.19	ENST00000360384.9	1860	14	6057	-103	3690	103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGATATAAGTGCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	58542179	58539660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123
ENSMUSG00000021546.19_58539661_58547805_1	chr13	-	1934	13	ISM	ENSMUSG00000021546.19	ENST00000376263.8	2723	14	431	700	431	103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGATATAAGTGCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	58547805	58539660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706
ENSMUSG00000021546.19_58539764_58547028_1	chr13	-	1723	12	NNC	ENSMUSG00000021546.19	novel	2723	14	NA	NA	-1159	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	58547028	58539763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969
ENSMUSG00000021546.19_58539764_58548231_1	chr13	-	1915	14	FSM	ENSMUSG00000021546.19	ENST00000376263.8	2723	14	5	803	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	58548231	58539763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146
ENSMUSG00000021546.19_58539936_58542510_1	chr13	-	911	6	NNC	ENSMUSG00000021546.19	novel	2557	14	NA	NA	3359	-172	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTAATTATTGTGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	58542510	58539935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291
ENSMUSG00000021546.19_58540073_58543044_1	chr13	-	929	7	NNC	ENSMUSG00000021546.19	novel	2557	14	NA	NA	2825	-309	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTAATGTTTTAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	58543044	58540072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978
ENSMUSG00000021546.19_58540073_58550278_1	chr13	-	1667	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	-309	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTAATGTTTTAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	58550278	58540072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000021546.19_58540073_58550278_2	chr13	-	1678	15	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	-309	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTAATGTTTTAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	58550278	58540072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000021548.11_85345601_85356953_1	chr13	+	372	4	ISM	ENSMUSG00000021548.11	ENSMUST00000164127.8	1718	8	8034	3777	8005	-3777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACAGAAGCTGGAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	85345600	85356953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_85345681_85350451_85350616_85354246_85354318_85356896
ENSMUSG00000021548.11_85345648_85357008_1	chr13	+	380	4	ISM	ENSMUSG00000021548.11	ENSMUST00000164127.8	1718	8	8081	3722	8052	-3722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAGGCATGATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	85345647	85357008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_85345681_85350451_85350616_85354246_85354318_85356896
ENSMUSG00000021548.11_85350520_85360917_1	chr13	+	399	5	ISM	ENSMUSG00000021548.11	ENSMUST00000163600.8	1055	9	12924	112	12924	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACTTATTAACCAACGGA	NA	NA	NA	NA	NA	NA	NA	NA	85350519	85360917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ENSMUSG00000021548.11_85354245_85361029_1	chr13	+	417	4	ISM	ENSMUSG00000021548.11	ENSMUST00000163600.8	1055	9	16649	0	16649	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTGATTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	85354244	85361029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_85354318_85356896_85357009_85359972_85360034_85360858
ENSMUSG00000021552.8_58381413_58411807_1	chr13	-	949	11	ISM	ENSMUSG00000021552.8	ENSMUST00000091579.6	1523	12	10195	253	10195	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGCACAGAATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	58411807	58381412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755
ENSMUSG00000021552.8_58389522_58422002_1	chr13	-	943	8	ISM	ENSMUSG00000021552.8	ENSMUST00000091579.6	1523	12	0	8362	0	-8362	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGAAAGACGCAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	58422002	58389521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421887
ENSMUSG00000021555.16_59733208_59757407_1	chr13	+	948	11	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	99	26329	99	-26329	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTCTCCAGCTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	59733207	59757407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292
ENSMUSG00000021555.16_59748773_59772403_1	chr13	+	972	11	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	15664	11333	15664	-11333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGCAAGATGAGGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	59748772	59772403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318
ENSMUSG00000021555.16_59755058_59773374_1	chr13	+	1017	11	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	21949	10362	21949	-10362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGTACAGCATGCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	59755057	59773374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232
ENSMUSG00000021555.16_59756575_59775769_1	chr13	+	968	9	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	23466	7967	23466	-7967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCATGGAGGAACAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	59756574	59775769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691
ENSMUSG00000021555.16_59757316_59776799_1	chr13	+	988	9	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	24207	6937	24207	-6937	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGGTGAGAATCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	59757315	59776799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731
ENSMUSG00000021555.16_59760494_59777909_1	chr13	+	949	9	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	27385	5827	27385	-5827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTGTGATGACGCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	59760493	59777909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813
ENSMUSG00000021555.16_59765775_59780831_1	chr13	+	950	9	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	32666	2905	32666	-2905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTCAAAGGTGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	59765774	59780831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761
ENSMUSG00000021555.16_59770683_59782287_1	chr13	+	948	9	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	37574	1449	37574	-1449	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAAGAGACTGCAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	59770682	59782287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ENSMUSG00000021555.16_59772363_59782453_1	chr13	+	1006	8	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	39254	1283	39254	-1283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGTACTCCATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	59772362	59782453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ENSMUSG00000021555.16_59772403_59782453_1	chr13	+	966	8	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	39294	1283	39294	-1283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGTACTCCATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	59772402	59782453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ENSMUSG00000021555.16_59773334_59782575_1	chr13	+	972	7	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	40225	1161	40225	-1161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAATAAATTTCTTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	59773333	59782575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ENSMUSG00000021555.16_59777936_59782950_1	chr13	+	942	4	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	44827	786	44827	-786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTTGAAGGAAAACCACAT	NA	NA	NA	NA	NA	NA	NA	NA	59777935	59782950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_59777955_59778394_59778518_59780761_59780843_59782231
ENSMUSG00000021555.16_59778483_59783058_1	chr13	+	943	3	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	45374	678	45374	-678	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCTGAAGTCCCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	59778482	59783058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_59778518_59780761_59780843_59782231
ENSMUSG00000021556.13_59783693_59788066_1	chr13	-	1764	3	ISM	ENSMUSG00000021556.13	ENSMUST00000095739.10	3689	11	35528	883	35528	-883	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATCTGGTTTGGGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	59788066	59783692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59785216_59786118_59786227_59787933
ENSMUSG00000021556.13_59784169_59797473_1	chr13	-	1749	6	ISM	ENSMUSG00000021556.13	ENSMUST00000095739.10	3689	11	26121	1359	26121	-1359	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGTGAATGTTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	59797473	59784168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376
ENSMUSG00000021556.13_59784289_59812069_1	chr13	-	1748	8	ISM	ENSMUSG00000021556.13	ENSMUST00000095739.10	3689	11	11525	1479	11525	-1479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTGTCCAAGAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	59812069	59784288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011
ENSMUSG00000021556.13_59784521_59813463_1	chr13	-	1761	9	ISM	ENSMUSG00000021556.13	ENSMUST00000095739.10	3689	11	10131	1711	10131	-1711	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGCAAGAATGAAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	59813463	59784520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340
ENSMUSG00000021557.16_59597912_59608353_1	chr13	-	288	2	ISM	ENSMUSG00000021557.16	ENST00000337006.8	4269	25	96775	388	83900	-388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTGGTTTTCATTATG	NA	NA	NA	NA	NA	NA	NA	NA	59608353	59597911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59598129_59608282
ENSMUSG00000021557.16_59598041_59609877_1	chr13	-	316	3	ISM	ENSMUSG00000021557.16	ENST00000337006.8	4269	25	95251	517	82376	-517	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAGCGGAGAACACAGG	NA	NA	NA	NA	NA	NA	NA	NA	59609877	59598040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59598129_59608282_59608444_59609810
ENSMUSG00000021557.16_59608384_59613871_1	chr13	-	310	3	ISM	ENSMUSG00000021557.16	ENSMUST00000164215.8	4331	25	78382	6720	78382	-6720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCGTTTGAAACGACTGAC	NA	NA	NA	NA	NA	NA	NA	NA	59613871	59608383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59608444_59609810_59609988_59613798
ENSMUSG00000021557.16_59630331_59643463_1	chr13	-	324	3	ISM	ENSMUSG00000021557.16	ENSMUST00000164215.8	4331	25	48790	28667	48790	10883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTCTTACAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	59643463	59630330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59630419_59643146_59643296_59643376
ENSMUSG00000021567.16_73969171_73971475_1	chr13	-	699	3	ISM	ENSMUSG00000021567.16	ENST00000296849.10	1299	8	23662	93	23662	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1742	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGTGATGCCTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	73971475	73969170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_73969657_73970808_73970937_73971390
ENSMUSG00000021567.16_73969327_73972473_1	chr13	-	649	4	ISM	ENSMUSG00000021567.16	ENST00000296849.10	1299	8	22664	249	22664	-249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCCCCACCACAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	73972473	73969326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_73969657_73970808_73970937_73971390_73971476_73972367
ENSMUSG00000021567.16_73969519_73973930_1	chr13	-	720	6	ISM	ENSMUSG00000021567.16	ENST00000296849.10	1299	8	21207	441	21207	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1598	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGAGCCTGCCACCCGG	NA	NA	NA	NA	NA	NA	NA	NA	73973930	73969518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_73969657_73970808_73970937_73971390_73971476_73972367_73972513_73973184_73973281_73973802
ENSMUSG00000021567.16_73969620_73975039_1	chr13	-	663	7	ISM	ENSMUSG00000021567.16	ENST00000296849.10	1299	8	20098	542	20098	-542	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGCCACACACATTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	73975039	73969619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_73969657_73970808_73970937_73971390_73971476_73972367_73972513_73973184_73973281_73973802_73973931_73974995
ENSMUSG00000021567.16_73970866_73995112_1	chr13	-	638	7	ISM	ENSMUSG00000021567.16	ENST00000296849.10	1299	8	25	1788	25	-1788	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCACTACCTAGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	73995112	73970865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_73970937_73971390_73971476_73972367_73972513_73973184_73973281_73973802_73973931_73974995_73975057_73995060
ENSMUSG00000021569.11_74068486_74077834_1	chr13	-	262	4	ISM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	8069	9020	8069	-9020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTCTGATTGATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	74077834	74068485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74068554_74069291_74069356_74076029_74076103_74077777
ENSMUSG00000021569.11_74084237_74085719_1	chr13	-	266	2	ISM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	184	24771	184	-24771	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCCTCAGGTAAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	74085719	74084236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74084392_74085608
ENSMUSG00000021569.11_74084280_74085779_1	chr13	-	283	2	ISM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	124	24814	124	-24814	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTCAGTCAGTGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	74085779	74084279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74084392_74085608
ENSMUSG00000021576.7_74451628_74465403_1	chr13	-	1088	6	FSM	ENSMUSG00000021576.7	ENSMUST00000222759.2	1376	6	296	-8	37	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGCTGGTTTTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	74465403	74451627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_74452168_74453659_74453770_74457808_74457962_74459786_74459832_74464448_74464511_74465225
ENSMUSG00000021576.7_74451961_74465340_1	chr13	-	636	5	FSM	ENSMUSG00000021576.7	ENST00000628729.2	950	5	4	310	4	-310	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATCGTTCATACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	74465340	74451960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_74452168_74453659_74453770_74457802_74457962_74459786_74459832_74465225
ENSMUSG00000021577.15_74470373_74485577_1	chr13	-	2126	10	ISM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	12822	0	-5984	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	74485577	74470372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509
ENSMUSG00000021577.15_74470506_74485622_1	chr13	-	2038	10	ISM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	12777	133	5995	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCATGCAGTTATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	74485622	74470505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509
ENSMUSG00000021577.15_74470640_74487256_1	chr13	-	2031	11	ISM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	11143	267	4361	-267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGGTCCATGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	74487256	74470639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165
ENSMUSG00000021577.15_74470851_74487875_1	chr13	-	2079	12	ISM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	10524	478	3742	352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGTGTGAAGTAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	74487875	74470850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690
ENSMUSG00000021577.15_74471057_74493046_1	chr13	-	2071	14	ISM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	5353	684	-1429	146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGATTGAGTTGCGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	74493046	74471056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969
ENSMUSG00000021577.15_74471185_74479499_1	chr13	-	658	6	NNC	ENSMUSG00000021577.15	novel	725	6	NA	NA	94	18	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTTATGTGATTATATA	NA	NA	NA	NA	NA	NA	NA	NA	74479499	74471184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_74471281_74471955_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417
ENSMUSG00000021577.15_74471185_74479499_2	chr13	-	657	6	FSM	ENSMUSG00000021577.15	ENST00000515467.2	725	6	94	-26	94	18	multi-exon	FALSE	canonical	NA	NA	NA	NA	1710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTTATGTGATTATATA	NA	NA	NA	NA	NA	NA	NA	NA	74479499	74471184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_74471276_74471951_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417
ENSMUSG00000021577.15_74471185_74487875_1	chr13	-	1308	10	ISM	ENSMUSG00000021577.15	ENST00000617470.4	1411	11	3742	-18	3742	18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTTATGTGATTATATA	NA	NA	NA	NA	NA	NA	NA	NA	74487875	74471184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482497_74487768
ENSMUSG00000021577.15_74471185_74498276_1	chr13	-	1965	15	FSM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	123	812	123	18	multi-exon	FALSE	canonical	NA	NA	NA	NA	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTTATGTGATTATATA	NA	NA	NA	NA	NA	NA	NA	NA	74498276	74471184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ENSMUSG00000021577.15_74471185_74498399_1	chr13	-	2088	15	FSM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	0	812	0	18	multi-exon	FALSE	canonical	NA	NA	NA	NA	2269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTTATGTGATTATATA	NA	NA	NA	NA	NA	NA	NA	NA	74498399	74471184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ENSMUSG00000021577.15_74472011_74491519_1	chr13	-	1172	10	ISM	ENSMUSG00000021577.15	ENST00000617470.4	1411	11	98	808	98	-800	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTGGAGGAAGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	74491519	74472010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482497_74487768_74487835_74491455
ENSMUSG00000021578.18_74501013_74507605_1	chr13	+	3124	2	ISM	ENSMUSG00000021578.18	ENSMUST00000160021.8	2682	4	2577	3215	2550	-1599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAAGTTTTTTACTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	74501012	74507605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74501106_74504574
ENSMUSG00000021583.8_74787992_74808435_1	chr13	+	795	4	ISM	ENSMUSG00000021583.8	ENST00000296754.7	2940	19	43	30399	43	-30399	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCACTGTGAAGATGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	74787991	74808435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74788057_74794289_74794834_74805751_74805891_74808388
ENSMUSG00000021583.8_74794496_74811578_1	chr13	+	784	5	ISM	ENSMUSG00000021583.8	ENST00000296754.7	2940	19	6547	27256	6547	-27256	internal_fragment	TRUE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCACATACAGAGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	74794495	74811578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74794834_74805751_74805891_74808388_74808524_74810427_74810549_74811527
ENSMUSG00000021583.8_74794788_74814300_1	chr13	+	793	7	ISM	ENSMUSG00000021583.8	ENST00000296754.7	2940	19	6839	24534	6839	-24534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCTGCGCAGATTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	74794787	74814300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74794834_74805751_74805891_74808388_74808524_74810427_74810549_74811527_74811683_74812227_74812342_74814217
ENSMUSG00000021583.8_74805793_74814612_1	chr13	+	805	7	ISM	ENSMUSG00000021583.8	ENST00000296754.7	2940	19	17844	24222	17844	-24222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGAGGAATTGTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	74805792	74814612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74805891_74808388_74808524_74810427_74810549_74811527_74811683_74812227_74812342_74814217_74814350_74814562
ENSMUSG00000021583.8_74808496_74816124_1	chr13	+	802	8	ISM	ENSMUSG00000021583.8	ENST00000296754.7	2940	19	20547	22710	20547	-22710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGCAGAAGGGCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	74808495	74816124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74808524_74810427_74810549_74811527_74811683_74812227_74812342_74814217_74814350_74814562_74814695_74814836_74814909_74816076
ENSMUSG00000021583.8_74811586_74819505_1	chr13	+	861	8	ISM	ENSMUSG00000021583.8	ENST00000296754.7	2940	19	23637	19329	23637	-19329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGATGGATGGGCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	74811585	74819505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74811683_74812227_74812342_74814217_74814350_74814562_74814695_74814836_74814909_74816076_74816232_74817518_74817599_74819426
ENSMUSG00000021583.8_74814218_74820899_1	chr13	+	792	7	ISM	ENSMUSG00000021583.8	ENST00000296754.7	2940	19	26269	17935	26269	-17935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTGTACTTGAAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	74814217	74820899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74814350_74814562_74814695_74814836_74814909_74816076_74816232_74817518_74817599_74819426_74819611_74820862
ENSMUSG00000021583.8_74814670_74821881_1	chr13	+	841	7	ISM	ENSMUSG00000021583.8	ENST00000296754.7	2940	19	26721	16953	26721	-16953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATGGAAACATGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	74814669	74821881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74814695_74814836_74814909_74816076_74816232_74817518_74817599_74819426_74819611_74820862_74821020_74821713
ENSMUSG00000021583.8_74816087_74822778_1	chr13	+	789	6	ISM	ENSMUSG00000021583.8	ENST00000296754.7	2940	19	28138	16056	28138	-16056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCCCAAAACACAGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	74816086	74822778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74816232_74817518_74817599_74819426_74819611_74820862_74821020_74821713_74821899_74822740
ENSMUSG00000021583.8_74817553_74823433_1	chr13	+	786	6	ISM	ENSMUSG00000021583.8	ENST00000296754.7	2940	19	29604	15401	29604	-15401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCTCACACTCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	74817552	74823433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74817599_74819426_74819611_74820862_74821020_74821713_74821899_74822740_74822903_74823381
ENSMUSG00000021583.8_74819504_74823999_1	chr13	+	808	6	ISM	ENSMUSG00000021583.8	ENST00000296754.7	2940	19	31555	14835	31555	-14835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCACCAGAGCACGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	74819503	74823999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74819611_74820862_74821020_74821713_74821899_74822740_74822903_74823381_74823523_74823943
ENSMUSG00000021583.8_74820861_74838834_1	chr13	+	871	6	ISM	ENSMUSG00000021583.8	ENST00000296754.7	2940	19	32912	0	32912	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTTGCTGTGACAATAT	NA	NA	NA	NA	NA	NA	NA	NA	74820860	74838834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74821020_74821713_74821899_74822740_74822903_74823381_74823523_74823943_74824026_74838692
ENSMUSG00000021585.11_74840487_74889536_1	chr13	-	4217	23	ISM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	29319	0	-7156	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTTGGCTATGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	74889536	74840486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467
ENSMUSG00000021585.11_74840674_74894138_1	chr13	-	4149	25	ISM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	24717	187	-11758	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGCAGATATTGCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	74894138	74840673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109
ENSMUSG00000021585.11_74840963_74918730_1	chr13	-	4164	29	FSM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	125	476	-21	-476	multi-exon	FALSE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAAACCTTTGGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	74918730	74840962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
ENSMUSG00000021585.11_74841038_74918784_1	chr13	-	4143	29	FSM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	71	551	-16	-551	multi-exon	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTCATTATTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	74918784	74841037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
ENSMUSG00000021585.11_74841091_74918855_1	chr13	-	4161	29	FSM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	0	604	0	-604	multi-exon	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAATGGTACTGCATGCG	NA	NA	NA	NA	NA	NA	NA	NA	74918855	74841090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
ENSMUSG00000021585.11_74875394_74946837_1	chr13	-	1434	19	ISM	ENSMUSG00000021585.11	ENSMUST00000223206.2	5141	32	10092	34907	9221	-32612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGATGATGCCCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	74946837	74875393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774
ENSMUSG00000021585.11_74876492_74956645_1	chr13	-	1396	19	ISM	ENSMUSG00000021585.11	ENSMUST00000223206.2	5141	32	284	36005	284	-33710	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAAGACAAACCATCTAC	NA	NA	NA	NA	NA	NA	NA	NA	74956645	74876491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ENSMUSG00000021585.11_74880266_74956778_1	chr13	-	1371	17	ISM	ENSMUSG00000021585.11	ENSMUST00000223206.2	5141	32	151	39779	151	-37484	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTGAAGATGAGGACACA	NA	NA	NA	NA	NA	NA	NA	NA	74956778	74880265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ENSMUSG00000021585.11_74883370_74956929_1	chr13	-	1470	16	ISM	ENSMUSG00000021585.11	ENSMUST00000223206.2	5141	32	0	42883	0	-40588	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGCTGAACAAGTCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	74956929	74883369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ENSMUSG00000021589.14_76017656_76091773_1	chr13	-	4767	12	FSM	ENSMUSG00000021589.14	ENSMUST00000022078.12	4980	12	213	0	213	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAATGAAGTGTTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	76091773	76017655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_76020581_76024289_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
ENSMUSG00000021591.9_75987987_75997611_1	chr13	+	686	3	FSM	ENSMUSG00000021591.9	ENSMUST00000022082.8	1345	3	0	659	0	41	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTTTTCCAAATCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	75987986	75997611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_75988295_75995288_75995418_75997362
ENSMUSG00000021591.9_75988029_75997611_1	chr13	+	644	3	FSM	ENSMUSG00000021591.9	ENSMUST00000022082.8	1345	3	42	659	0	41	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTTTTCCAAATCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	75988028	75997611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_75988295_75995288_75995418_75997362
ENSMUSG00000021591.9_75988195_75997813_1	chr13	+	680	3	FSM	ENSMUSG00000021591.9	ENSMUST00000022082.8	1345	3	208	457	166	243	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTTACTTAGCCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	75988194	75997813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_75988295_75995288_75995418_75997362
ENSMUSG00000021592.19_76210285_76213600_1	chr13	-	639	2	ISM	ENSMUSG00000021592.19	ENSMUST00000239063.2	3657	8	33179	1744	33179	-1744	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACTCTTCTCCAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	76213600	76210284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_76210722_76213398
ENSMUSG00000021592.19_76220274_76242085_1	chr13	-	633	4	ISM	ENSMUSG00000021592.19	ENSMUST00000239063.2	3657	8	4694	11733	4694	-11733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACATTAGAGCATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	76242085	76220273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_76220391_76222893_76223171_76239776_76239937_76242006
ENSMUSG00000021595.19_69760168_69778764_1	chr13	+	1660	15	ISM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	33	3689	0	-3401	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCATTCCCGAGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	69760167	69778764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746
ENSMUSG00000021595.19_69760168_69778826_1	chr13	+	1722	15	ISM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	33	3627	0	-3339	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTCTCCAAGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	69760167	69778826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746
ENSMUSG00000021595.19_69760284_69778870_1	chr13	+	1650	15	ISM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	149	3583	-79	-3295	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGATGAAGGTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	69760283	69778870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746
ENSMUSG00000021595.19_69760363_69779439_1	chr13	+	1781	15	ISM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	228	3014	0	-2726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAAAGGGTTTCAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	69760362	69779439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353
ENSMUSG00000021595.19_69760529_69779787_1	chr13	+	1747	16	ISM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	394	2666	166	-2378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGAGTAAAGGGATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	69760528	69779787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650
ENSMUSG00000021595.19_69761055_69781386_1	chr13	+	1742	16	ISM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	920	1067	692	-779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTATGCGTGCCTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	69761054	69781386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346
ENSMUSG00000021595.19_69763581_69781754_1	chr13	+	1649	16	ISM	ENSMUSG00000021595.19	ENSMUST00000176485.8	2408	18	3413	411	3218	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTGTGCCCAAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	69763580	69781754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ENSMUSG00000021595.19_69763609_69781835_1	chr13	+	1702	16	ISM	ENSMUSG00000021595.19	ENSMUST00000176485.8	2408	18	3441	330	3246	-330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATTCTTACCAATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	69763608	69781835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ENSMUSG00000021595.19_69766278_69781976_1	chr13	+	1690	14	ISM	ENSMUSG00000021595.19	ENSMUST00000176485.8	2408	18	6110	189	5915	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCACACAATGAATTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	69766277	69781976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ENSMUSG00000021595.19_69767676_69782165_1	chr13	+	1736	13	ISM	ENSMUSG00000021595.19	ENSMUST00000176485.8	2408	18	7508	0	7313	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCTTCTAAAACGACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	69767675	69782165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ENSMUSG00000021595.19_69767686_69782165_1	chr13	+	1726	13	ISM	ENSMUSG00000021595.19	ENSMUST00000176485.8	2408	18	7518	0	7323	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCTTCTAAAACGACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	69767685	69782165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ENSMUSG00000021595.19_69774595_69782454_1	chr13	+	1739	10	ISM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	14460	-1	14232	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGCATGAGACTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	69774594	69782454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ENSMUSG00000021596.17_76789901_76973365_1	chr13	+	1249	12	ISM	ENSMUSG00000021596.17	ENST00000429576.6	2886	19	72	205570	72	61973	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCTGACAGGGCCAACAA	NA	NA	NA	NA	NA	NA	NA	NA	76789900	76973365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_76789946_76836606_76836750_76860198_76860279_76871786_76871899_76879889_76879929_76905104_76905276_76907808_76907940_76949477_76949665_76954287_76954382_76971091_76971195_76972890_76972994_76973324
ENSMUSG00000021596.17_76836605_76973916_1	chr13	+	1342	12	ISM	ENSMUSG00000021596.17	ENST00000429576.6	2886	19	46776	205019	46776	62524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAACCAAAGAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	76836604	76973916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_76836750_76860198_76860279_76871786_76871899_76879889_76879929_76905104_76905276_76907808_76907940_76949477_76949665_76954287_76954382_76971091_76971195_76972890_76972994_76973324_76973427_76973841
ENSMUSG00000021596.17_76860197_76975920_1	chr13	+	1319	12	ISM	ENSMUSG00000021596.17	ENST00000429576.6	2886	19	70368	203015	70368	64528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGATCACACTGTATTAC	NA	NA	NA	NA	NA	NA	NA	NA	76860196	76975920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_76860279_76871786_76871899_76879889_76879929_76905104_76905276_76907808_76907940_76949477_76949665_76954287_76954382_76971091_76971195_76972890_76972994_76973324_76973427_76973841_76973917_76975800
ENSMUSG00000021596.17_76871806_77168891_1	chr13	+	1293	13	ISM	ENSMUSG00000021596.17	ENST00000429576.6	2886	19	81977	10044	81977	-9179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATAAAATCTATGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	76871805	77168891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_76871899_76879889_76879929_76905104_76905276_76907808_76907940_76949477_76949665_76954287_76954382_76971091_76971195_76972890_76972994_76973324_76973427_76973841_76973917_76975800_76975921_77073590_77073645_77168870
ENSMUSG00000021596.17_76905155_77173012_1	chr13	+	1311	12	ISM	ENSMUSG00000021596.17	ENST00000429576.6	2886	19	115326	5923	115326	-5058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTAAAGCTTTTAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	76905154	77173012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_76905276_76907808_76907940_76949477_76949665_76954287_76954382_76971091_76971195_76972890_76972994_76973324_76973427_76973841_76973917_76975800_76975921_77073590_77073645_77168870_77168981_77172901
ENSMUSG00000021596.17_76905213_77176754_1	chr13	+	1266	13	ISM	ENSMUSG00000021596.17	ENST00000429576.6	2886	19	115384	2181	115384	-1316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAAGCTTCGGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	76905212	77176754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_76905276_76907808_76907940_76949477_76949665_76954287_76954382_76971091_76971195_76972890_76972994_76973324_76973427_76973841_76973917_76975800_76975921_77073590_77073645_77168870_77168981_77172901_77173012_77176740
ENSMUSG00000021596.17_76907807_77176840_1	chr13	+	1291	12	ISM	ENSMUSG00000021596.17	ENST00000429576.6	2886	19	117978	2095	117978	-1230	internal_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATGGTTCACTATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	76907806	77176840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_76907940_76949477_76949665_76954287_76954382_76971091_76971195_76972890_76972994_76973324_76973427_76973841_76973917_76975800_76975921_77073590_77073645_77168870_77168981_77172901_77173012_77176740
ENSMUSG00000021596.17_76949476_77178070_1	chr13	+	1230	12	ISM	ENSMUSG00000021596.17	ENST00000429576.6	2886	19	159647	865	159647	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTCCGAGGAAAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	76949475	77178070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_76949665_76954287_76954382_76971091_76971195_76972890_76972994_76973324_76973427_76973841_76973917_76975800_76975921_77073590_77073645_77168870_77168981_77172901_77173012_77176740_77176839_77177998
ENSMUSG00000021596.17_76954288_77178252_1	chr13	+	1223	11	ISM	ENSMUSG00000021596.17	ENST00000429576.6	2886	19	164459	683	164459	182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACTCAACTTGATAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	76954287	77178252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_76954382_76971091_76971195_76972890_76972994_76973324_76973427_76973841_76973917_76975800_76975921_77073590_77073645_77168870_77168981_77172901_77173012_77176740_77176839_77177998
ENSMUSG00000021596.17_76971125_77178396_1	chr13	+	1240	10	ISM	ENSMUSG00000021596.17	ENST00000429576.6	2886	19	181296	539	181296	326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATAAAATGCTCAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	76971124	77178396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_76971195_76972890_76972994_76973324_76973427_76973841_76973917_76975800_76975921_77073590_77073645_77168870_77168981_77172901_77173012_77176740_77176839_77177998
ENSMUSG00000021596.17_76972904_77178527_1	chr13	+	1288	9	ISM	ENSMUSG00000021596.17	ENST00000429576.6	2886	19	183075	408	183075	-408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTCAAACGGGGGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	76972903	77178527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_76972994_76973324_76973427_76973841_76973917_76975800_76975921_77073590_77073645_77168870_77168981_77172901_77173012_77176740_77176839_77177998
ENSMUSG00000021596.17_76972970_77178568_1	chr13	+	1263	9	ISM	ENSMUSG00000021596.17	ENST00000429576.6	2886	19	183141	367	183141	-367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGCACTTCAACTTAACA	NA	NA	NA	NA	NA	NA	NA	NA	76972969	77178568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_76972994_76973324_76973427_76973841_76973917_76975800_76975921_77073590_77073645_77168870_77168981_77172901_77173012_77176740_77176839_77177998
ENSMUSG00000021596.17_76973326_77178669_1	chr13	+	1339	8	ISM	ENSMUSG00000021596.17	ENST00000429576.6	2886	19	183497	266	183497	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTCTGCATACACACAT	NA	NA	NA	NA	NA	NA	NA	NA	76973325	77178669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_76973427_76973841_76973917_76975800_76975921_77073590_77073645_77168870_77168981_77172901_77173012_77176740_77176839_77177998
ENSMUSG00000021596.17_76973890_77178864_1	chr13	+	1385	7	ISM	ENSMUSG00000021596.17	ENST00000429576.6	2886	19	184061	71	184061	-71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAATACTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	76973889	77178864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_76973917_76975800_76975921_77073590_77073645_77168870_77168981_77172901_77173012_77176740_77176839_77177998
ENSMUSG00000021606.9_73467998_73476661_1	chr13	-	558	4	NNC	ENSMUSG00000021606.9	novel	568	4	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATAGTGAGTTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	73476661	73467997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_73468180_73468412_73468527_73475530_73475589_73476457
ENSMUSG00000021606.9_73467998_73476661_2	chr13	-	556	4	NNC	ENSMUSG00000021606.9	novel	568	4	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATAGTGAGTTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	73476661	73467997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_73468173_73468412_73468536_73475534_73475589_73476457
ENSMUSG00000021608.16_73615542_73662604_1	chr13	+	1512	14	FSM	ENSMUSG00000021608.16	ENSMUST00000022099.15	3675	14	226	1937	226	-640	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGAGAACTCAGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	73615541	73662604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ENSMUSG00000021608.16_73632391_73662791_1	chr13	+	1593	13	ISM	ENSMUSG00000021608.16	ENSMUST00000223060.2	2141	14	12521	453	12521	-453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTTATTTGTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	73632390	73662791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ENSMUSG00000021608.16_73632483_73662809_1	chr13	+	1519	13	ISM	ENSMUSG00000021608.16	ENSMUST00000223060.2	2141	14	12613	435	12613	-435	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAAGTCTGTCTCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	73632482	73662809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ENSMUSG00000021608.16_73637105_73662949_1	chr13	+	1520	12	ISM	ENSMUSG00000021608.16	ENSMUST00000223060.2	2141	14	17235	295	17235	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTATGGCTGTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	73637104	73662949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ENSMUSG00000021608.16_73637161_73663004_1	chr13	+	1519	12	ISM	ENSMUSG00000021608.16	ENSMUST00000223060.2	2141	14	17291	240	17291	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCTCTTTGTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	73637160	73663004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ENSMUSG00000021608.16_73644297_73663231_1	chr13	+	1575	10	ISM	ENSMUSG00000021608.16	ENSMUST00000223060.2	2141	14	24427	13	24427	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	73644296	73663231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ENSMUSG00000021608.16_73651161_73663347_1	chr13	+	1533	7	ISM	ENSMUSG00000021608.16	ENSMUST00000223060.2	2141	14	31291	-103	31291	103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGGCCTCACTGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	73651160	73663347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ENSMUSG00000021608.16_73659068_73663687_1	chr13	+	1509	4	ISM	ENSMUSG00000021608.16	ENSMUST00000223060.2	2141	14	39198	-443	39198	443	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAAAGCAGCCACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	73659067	73663687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_73659121_73659418_73659518_73661938_73662081_73662472
ENSMUSG00000021608.16_73659453_73663807_1	chr13	+	1542	3	ISM	ENSMUSG00000021608.16	ENSMUST00000223060.2	2141	14	39583	-563	39583	563	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTGTCACCTTCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	73659452	73663807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_73659518_73661938_73662081_73662472
ENSMUSG00000021608.16_73662058_73663965_1	chr13	+	1516	2	ISM	ENSMUSG00000021608.16	ENSMUST00000223060.2	2141	14	42188	-721	42188	-576	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATAGGAAATGACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	73662057	73663965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_73662081_73662472
ENSMUSG00000021610.9_73752125_73759835_1	chr13	+	1126	7	ISM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	0	8889	0	-8866	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCTGTCCCCTGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	73752124	73759835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740
ENSMUSG00000021610.9_73752308_73761798_1	chr13	+	1050	9	ISM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	183	6926	-4	-6903	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCATCTTCCTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	73752307	73761798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776
ENSMUSG00000021610.9_73753090_73764125_1	chr13	+	1041	11	ISM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	965	4599	778	-4576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGCTGTCTACTCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	73753089	73764125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081
ENSMUSG00000021610.9_73754481_73766581_1	chr13	+	1077	14	ISM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	2356	2143	-1361	-2120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGCCTGTTTCAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	73754480	73766581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520
ENSMUSG00000021610.9_73755837_73768718_1	chr13	+	1540	12	FSM	ENSMUSG00000021610.9	ENST00000507807.3	1556	12	-5	21	-5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAATATTTTTCTTAACC	NA	NA	NA	NA	NA	NA	NA	NA	73755836	73768718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73762725_73762792_73763291_73763343_73764081_73764193_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ENSMUSG00000021610.9_73755892_73768718_1	chr13	+	1479	12	NNC	ENSMUSG00000021610.9	novel	1556	12	NA	NA	50	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAATATTTTTCTTAACC	NA	NA	NA	NA	NA	NA	NA	NA	73755891	73768718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73762725_73762792_73763291_73763343_73764081_73764193_73765696_73765753_73765843_73765883_73766520_73766637_73768151
ENSMUSG00000021610.9_73755927_73768207_1	chr13	+	1050	14	ISM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	3802	517	85	-494	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCAAGCGGAAGCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	73755926	73768207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ENSMUSG00000021610.9_73755944_73768739_1	chr13	+	1454	12	FSM	ENSMUSG00000021610.9	ENST00000507807.3	1556	12	102	0	102	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAATAATATAAAATATAGA	NA	NA	NA	NA	NA	NA	NA	NA	73755943	73768739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73762725_73762792_73763291_73763343_73764081_73764193_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ENSMUSG00000021610.9_73755944_73768739_2	chr13	+	1448	12	NNC	ENSMUSG00000021610.9	novel	1556	12	NA	NA	102	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAATAATATAAAATATAGA	NA	NA	NA	NA	NA	NA	NA	NA	73755943	73768739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73762725_73762792_73763291_73763343_73764081_73764193_73765696_73765753_73765843_73765883_73766520_73766637_73768151
ENSMUSG00000021610.9_73759353_73768427_1	chr13	+	1040	12	ISM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	7228	297	3511	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCACATGAACTTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	73759352	73768427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ENSMUSG00000021610.9_73759789_73768573_1	chr13	+	1110	11	ISM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	7664	151	3947	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTCCTTATGTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	73759788	73768573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ENSMUSG00000021629.11_100939595_100940393_1	chr13	-	399	2	ISM	ENSMUSG00000021629.11	ENSMUST00000225922.2	2722	15	29455	240	29455	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGGAATCTTGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	100940393	100939594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100939970_100940369
ENSMUSG00000021629.11_100939746_100943113_1	chr13	-	425	3	ISM	ENSMUSG00000021629.11	ENSMUST00000225922.2	2722	15	26735	391	26735	-391	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGAGCAGAGTGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	100943113	100939745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100939970_100940369_100940499_100943041
ENSMUSG00000021629.11_100940420_100945679_1	chr13	-	394	3	ISM	ENSMUSG00000021629.11	ENSMUST00000225922.2	2722	15	24169	1065	24169	-1065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATATACAAGTGACATCT	NA	NA	NA	NA	NA	NA	NA	NA	100945679	100940419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100940499_100943041_100943269_100945591
ENSMUSG00000021629.11_100943102_100947843_1	chr13	-	393	3	ISM	ENSMUSG00000021629.11	ENSMUST00000225922.2	2722	15	22005	3747	22005	-3747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTACTTCTGAGACTACC	NA	NA	NA	NA	NA	NA	NA	NA	100947843	100943101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100943269_100945591_100945788_100947813
ENSMUSG00000021629.11_100943249_100949199_1	chr13	-	390	4	ISM	ENSMUSG00000021629.11	ENSMUST00000225922.2	2722	15	20649	3894	20649	-3894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACACACTGGGCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	100949199	100943248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100943269_100945591_100945788_100947813_100947944_100949155
ENSMUSG00000021629.11_100945722_100949860_1	chr13	-	409	4	ISM	ENSMUSG00000021629.11	ENSMUST00000225922.2	2722	15	19988	6367	19988	-6367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCCATGGCGCTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	100949860	100945721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100945788_100947813_100947944_100949155_100949314_100949805
ENSMUSG00000021629.11_100947869_100949962_1	chr13	-	390	3	ISM	ENSMUSG00000021629.11	ENSMUST00000225922.2	2722	15	19886	8514	19886	-8514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATCAGTGGCTAGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	100949962	100947868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100947944_100949155_100949314_100949805
ENSMUSG00000021629.11_100949250_100950311_1	chr13	-	394	3	ISM	ENSMUSG00000021629.11	ENSMUST00000225922.2	2722	15	19537	9895	19537	-9895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACATGCTCTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	100950311	100949249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100949314_100949805_100950015_100950190
ENSMUSG00000021629.11_100949301_100950375_1	chr13	-	407	3	ISM	ENSMUSG00000021629.11	ENSMUST00000225922.2	2722	15	19473	9946	19473	-9946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTGTTCTATGGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	100950375	100949300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100949314_100949805_100950015_100950190
ENSMUSG00000021629.11_100949963_100951153_1	chr13	-	391	3	ISM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	18782	10807	18695	-10608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATATTCTCCTGAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	100951153	100949962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100950015_100950190_100950480_100951103
ENSMUSG00000021629.11_100950401_100954698_1	chr13	-	392	4	ISM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	15237	11245	15150	-11046	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTCTGTTTGTTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	100954698	100950400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100950480_100951103_100951275_100953516_100953594_100954633
ENSMUSG00000021629.11_100951195_100961487_1	chr13	-	397	5	ISM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	8448	12039	8361	-11840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGAGCTAAGCGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	100961487	100951194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423
ENSMUSG00000021629.11_100953543_100963026_1	chr13	-	380	5	ISM	ENSMUSG00000021629.11	ENSMUST00000225922.2	2722	15	6822	14188	6822	-14188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTAGGGGTGGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	100963026	100953542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959
ENSMUSG00000021629.11_100954651_100965487_1	chr13	-	392	5	ISM	ENSMUSG00000021629.11	ENSMUST00000225922.2	2722	15	4361	15296	4361	-15296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGGCTGAACACCGTA	NA	NA	NA	NA	NA	NA	NA	NA	100965487	100954650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407
ENSMUSG00000021635.15_100754318_100765986_1	chr13	-	761	7	ISM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	21569	331	21569	-331	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAATGCCGACCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	100765986	100754317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907
ENSMUSG00000021635.15_100769410_100781645_1	chr13	-	754	7	ISM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	5910	15423	5910	-15423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTATAGAAGCTAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	100781645	100769409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498
ENSMUSG00000021635.15_100781601_100787516_1	chr13	-	444	3	ISM	ENSMUSG00000021635.15	ENSMUST00000022136.14	2839	17	43	27929	39	-27614	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAAGGCTCTCTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	100787516	100781600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100781754_100786185_100786290_100787329
ENSMUSG00000021638.13_100635010_100689226_1	chr13	-	2095	9	NNC	ENSMUSG00000021638.13	novel	2839	9	NA	NA	0	-388	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTGTTGAGCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	100689226	100635009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_100635424_100639443_100639486_100642658_100642831_100647924_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100689071
ENSMUSG00000021638.13_100635010_100689226_2	chr13	-	2100	9	FSM	ENSMUSG00000021638.13	ENSMUST00000022140.12	2839	9	0	739	0	-388	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTGTTGAGCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	100689226	100635009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100689071
ENSMUSG00000021639.18_100605088_100615762_1	chr13	-	761	5	ISM	ENSMUSG00000021639.18	ENST00000513202.5	1310	14	10877	-171	10877	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGTTTTTTTTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	100615762	100605087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698
ENSMUSG00000021639.18_100605316_100625443_1	chr13	-	1119	12	ISM	ENSMUSG00000021639.18	ENST00000513202.5	1310	14	1196	57	1196	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATGAAAGCACTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	100625443	100605315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356
ENSMUSG00000021639.18_100605509_100626039_1	chr13	-	975	13	ISM	ENSMUSG00000021639.18	ENST00000513202.5	1310	14	600	250	600	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTTGTGTGGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	100626039	100605508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625990
ENSMUSG00000021639.18_100612976_100626600_1	chr13	-	957	12	ISM	ENSMUSG00000021639.18	ENST00000513202.5	1310	14	39	7717	39	-7717	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGAATTTTGATTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	100626600	100612975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625990_100626069_100626583
ENSMUSG00000021639.18_100617109_100629061_1	chr13	-	826	11	ISM	ENSMUSG00000021639.18	ENSMUST00000066984.14	1656	16	8	12021	8	-11850	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATCATGTGAGCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	100629061	100617108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ENSMUSG00000021643.16_100244520_100250746_1	chr13	+	593	3	NNC	ENSMUSG00000021643.16	novel	601	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGAATATTATTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	100244519	100250746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_100244738_100245530_100245640_100250480
ENSMUSG00000021646.10_100085038_100104357_1	chr13	-	1114	9	ISM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	47790	-3	47790	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGGTTGTTGAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	100104357	100085037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341
ENSMUSG00000021646.10_100085239_100112929_1	chr13	-	1075	11	ISM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	39218	198	39218	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTATGATTTGTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	100112929	100085238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916
ENSMUSG00000021646.10_100085426_100125115_1	chr13	-	1061	12	ISM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	27032	385	27032	-385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCCTGGGGCTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	100125115	100085425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043
ENSMUSG00000021646.10_100088698_100126833_1	chr13	-	1107	12	ISM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	25314	3657	25314	-3657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGAAGGGAACCCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	100126833	100088697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755
ENSMUSG00000021646.10_100090716_100127794_1	chr13	-	1108	12	ISM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	24353	5675	24353	-5675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGAGGAGAGCAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	100127794	100090715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719
ENSMUSG00000021646.10_100095312_100136824_1	chr13	-	1088	12	ISM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	15323	10271	15323	-10271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCATCGTTCTCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	100136824	100095311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757
ENSMUSG00000021646.10_100100325_100152102_1	chr13	-	1143	11	ISM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	45	15284	45	-15284	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTTACAGGTACAAAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	100152102	100100324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ENSMUSG00000021650.8_99456676_99479915_1	chr13	-	840	7	NNC	ENSMUSG00000021650.8	novel	846	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCCATTTCCCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	99479915	99456675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_99456902_99458068_99458183_99463145_99463215_99466459_99466574_99468943_99469036_99476408_99476539_99479820
ENSMUSG00000021650.8_99456676_99479915_2	chr13	-	845	7	NNC	ENSMUSG00000021650.8	novel	846	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	4495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCCATTTCCCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	99479915	99456675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99476408_99476539_99479821
ENSMUSG00000021650.8_99456676_99479915_3	chr13	-	846	7	FSM	ENSMUSG00000021650.8	ENST00000536805.5	846	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCCATTTCCCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	99479915	99456675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99476408_99476539_99479820
ENSMUSG00000021650.8_99456865_99473218_1	chr13	-	559	7	ISM	ENSMUSG00000021650.8	ENSMUST00000022153.8	1704	10	7995	710	6697	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCATAGCCAGATTCGAT	NA	NA	NA	NA	NA	NA	NA	NA	99473218	99456864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170
ENSMUSG00000021650.8_99458069_99473290_1	chr13	-	515	5	ISM	ENSMUSG00000021650.8	ENST00000543322.5	964	8	6625	1393	6625	-1393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTGCCAACGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	99473290	99458068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99473170
ENSMUSG00000021650.8_99458117_99476472_1	chr13	-	608	7	ISM	ENSMUSG00000021650.8	ENSMUST00000022153.8	1704	10	4741	1962	3443	-1441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATTTATCGAAATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	99476472	99458116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408
ENSMUSG00000021650.8_99466460_99479913_1	chr13	-	626	6	ISM	ENSMUSG00000021650.8	ENSMUST00000022153.8	1704	10	1300	10305	2	-9784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACCTTGGGGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	99479913	99466459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820
ENSMUSG00000021650.8_99466534_99479867_1	chr13	-	179	3	ISM	ENSMUSG00000021650.8	ENST00000503868.5	716	6	48	9858	48	-9858	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGCCCTAATTAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	99479867	99466533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99466574_99468943_99469036_99479820
ENSMUSG00000021660.15_98446450_98450234_1	chr13	-	607	4	ISM	ENSMUSG00000021660.15	ENSMUST00000134542.2	780	5	2650	0	2650	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGAATAAAGTTTGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	98450234	98446449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146
ENSMUSG00000021660.15_98446450_98452755_1	chr13	-	651	5	FSM	ENSMUSG00000021660.15	ENSMUST00000134542.2	780	5	129	0	129	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGAATAAAGTTTGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	98452755	98446449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737
ENSMUSG00000021660.15_98446450_98453504_1	chr13	-	764	5	FSM	ENSMUSG00000021660.15	ENST00000678135.1	741	5	-8	-15	-8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGAATAAAGTTTGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	98453504	98446449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98453373
ENSMUSG00000021660.15_98446693_98453475_1	chr13	-	561	6	FSM	ENSMUSG00000021660.15	ENSMUST00000152704.8	888	6	39	288	0	-228	multi-exon	FALSE	canonical	NA	NA	NA	NA	2557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAGGCTTCTAAGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	98453475	98446692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453373
ENSMUSG00000021665.10_97312839_97334803_1	chr13	-	1838	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	97334803	97312838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_97313098_97313309_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021665.10_97312839_97334803_2	chr13	-	1838	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	97334803	97312838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320310_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021665.10_97312839_97334803_3	chr13	-	1838	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	97334803	97312838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318517_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021665.10_97312839_97334803_4	chr13	-	1843	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	62	0	62	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	97334803	97312838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021665.10_97312839_97334815_1	chr13	-	1850	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	97334815	97312838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320310_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021665.10_97312839_97334815_2	chr13	-	1850	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	97334815	97312838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_97313098_97313309_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021665.10_97312839_97334815_3	chr13	-	1850	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	97334815	97312838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318517_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021665.10_97312839_97334815_4	chr13	-	1849	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	830	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	97334815	97312838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314557_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021665.10_97312839_97334815_5	chr13	-	1849	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	97334815	97312838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325855_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021669.16_96679501_96761218_1	chr13	+	1291	11	ISM	ENSMUSG00000021669.16	ENST00000642809.1	1894	16	-77	11176	-77	-11176	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACCACATGAACTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	96679500	96761218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752970_96753058_96761202
ENSMUSG00000021669.16_96679690_96765585_1	chr13	+	1247	12	ISM	ENSMUSG00000021669.16	ENST00000642809.1	1894	16	112	6809	112	-6809	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGTGTTACAGGACATG	NA	NA	NA	NA	NA	NA	NA	NA	96679689	96765585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752970_96753058_96761202_96761299_96765520
ENSMUSG00000021669.16_96679741_96765586_1	chr13	+	1197	12	ISM	ENSMUSG00000021669.16	ENST00000642809.1	1894	16	163	6808	163	-6808	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTTACAGGACATGA	NA	NA	NA	NA	NA	NA	NA	NA	96679740	96765586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752970_96753058_96761202_96761299_96765520
ENSMUSG00000021669.16_96685781_96770604_1	chr13	+	1256	13	ISM	ENSMUSG00000021669.16	ENST00000642809.1	1894	16	6203	1790	6203	-1790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTACTGTATCTTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	96685780	96770604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752970_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580
ENSMUSG00000021669.16_96708418_96770713_1	chr13	+	1307	12	ISM	ENSMUSG00000021669.16	ENST00000642809.1	1894	16	28840	1681	28840	-1681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATAGCATAAAGATAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	96708417	96770713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752970_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580
ENSMUSG00000021669.16_96734711_96771399_1	chr13	+	1225	12	ISM	ENSMUSG00000021669.16	ENST00000642809.1	1894	16	55133	995	55133	-995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATTTGTCAAACTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	96734710	96771399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752970_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361
ENSMUSG00000021669.16_96735896_96772330_1	chr13	+	1282	12	ISM	ENSMUSG00000021669.16	ENST00000642809.1	1894	16	56318	64	56318	-64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTTACTTCTTATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	96735895	96772330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752970_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257
ENSMUSG00000021669.16_96735896_96772330_2	chr13	+	1280	12	NNC	ENSMUSG00000021669.16	novel	1894	16	NA	NA	56318	-64	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTTACTTCTTATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	96735895	96772330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752972_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257
ENSMUSG00000021670.15_96785475_96788625_1	chr13	-	2003	4	ISM	ENSMUSG00000021670.15	ENST00000343975.9	3462	18	14593	-680	14593	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTGTAAGCAGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	96788625	96785474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603
ENSMUSG00000021670.15_96785709_96789311_1	chr13	-	2034	5	ISM	ENSMUSG00000021670.15	ENST00000343975.9	3462	18	13907	-446	13907	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGTTGTATGTAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	96789311	96785708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165
ENSMUSG00000021670.15_96785712_96792397_1	chr13	-	2311	8	ISM	ENSMUSG00000021670.15	ENST00000680160.1	4243	19	10821	224	10821	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGCTGTTGTATGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	96792397	96785711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788408_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361
ENSMUSG00000021670.15_96785776_96789311_1	chr13	-	1967	5	ISM	ENSMUSG00000021670.15	ENST00000343975.9	3462	18	13907	-379	13907	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGTGCCGCGGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	96789311	96785775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165
ENSMUSG00000021670.15_96785877_96793175_1	chr13	-	2374	9	ISM	ENSMUSG00000021670.15	ENST00000680160.1	4243	19	10043	389	10043	278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATAATAAAGAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	96793175	96785876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788408_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070
ENSMUSG00000021670.15_96785885_96791387_1	chr13	-	1947	6	ISM	ENSMUSG00000021670.15	ENST00000343975.9	3462	18	11831	-270	11831	270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTGTATAAATAATAATAA	NA	NA	NA	NA	NA	NA	NA	NA	96791387	96785884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323
ENSMUSG00000021670.15_96785944_96791429_1	chr13	-	1930	6	ISM	ENSMUSG00000021670.15	ENST00000343975.9	3462	18	11789	-211	11789	211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCTCAGGGGGTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	96791429	96785943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323
ENSMUSG00000021670.15_96785945_96793175_1	chr13	-	2306	9	ISM	ENSMUSG00000021670.15	ENST00000680160.1	4243	19	10043	457	10043	210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTCAGGGGGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	96793175	96785944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788408_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070
ENSMUSG00000021670.15_96786018_96793226_1	chr13	-	2284	9	ISM	ENSMUSG00000021670.15	ENST00000680160.1	4243	19	9992	530	9992	137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTCCTGTGGCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	96793226	96786017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788408_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070
ENSMUSG00000021670.15_96786155_96792520_1	chr13	-	2036	8	ISM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	14924	680	10698	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGCTTGGGCCAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	96792520	96786154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361
ENSMUSG00000021670.15_96786155_96795268_1	chr13	-	2364	10	ISM	ENSMUSG00000021670.15	ENST00000680160.1	4243	19	7950	667	7950	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGCTTGGGCCAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	96795268	96786154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788408_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090
ENSMUSG00000021670.15_96786155_96802406_1	chr13	-	3161	16	ISM	ENSMUSG00000021670.15	ENST00000343975.9	3462	18	812	0	812	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGCTTGGGCCAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	96802406	96786154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317
ENSMUSG00000021670.15_96786268_96795268_1	chr13	-	2251	10	ISM	ENSMUSG00000021670.15	ENST00000680160.1	4243	19	7950	780	7950	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTTTGGTAAACTATC	NA	NA	NA	NA	NA	NA	NA	NA	96795268	96786267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788408_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090
ENSMUSG00000021670.15_96786268_96803095_1	chr13	-	3226	18	FSM	ENSMUSG00000021670.15	ENST00000343975.9	3462	18	123	113	123	-113	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTTTGGTAAACTATC	NA	NA	NA	NA	NA	NA	NA	NA	96803095	96786267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028
ENSMUSG00000021670.15_96786356_96793265_1	chr13	-	2030	9	ISM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	14179	881	9953	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTTAAAAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	96793265	96786355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070
ENSMUSG00000021670.15_96786356_96803218_1	chr13	-	3261	18	FSM	ENSMUSG00000021670.15	ENST00000343975.9	3462	18	0	201	0	-201	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTTAAAAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	96803218	96786355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028
ENSMUSG00000021670.15_96786527_96795777_1	chr13	-	2291	12	ISM	ENSMUSG00000021670.15	ENST00000680160.1	4243	19	7441	1039	7441	-372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCACTGCATTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	96795777	96786526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788408_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724
ENSMUSG00000021670.15_96786576_96795829_1	chr13	-	2294	12	ISM	ENSMUSG00000021670.15	ENST00000680160.1	4243	19	7389	1088	7389	-421	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTACAGAATAATGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	96795829	96786575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788408_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724
ENSMUSG00000021670.15_96786635_96795878_1	chr13	-	2284	12	ISM	ENSMUSG00000021670.15	ENST00000680160.1	4243	19	7340	1147	7340	-480	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGGTCTATTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	96795878	96786634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788408_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724
ENSMUSG00000021670.15_96786672_96795266_1	chr13	-	1890	10	ISM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	12178	1197	7952	-517	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTAAGTTTATTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	96795266	96786671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090
ENSMUSG00000021670.15_96786784_96795631_1	chr13	-	2031	11	ISM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	11813	1309	7587	-629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGATCAGTGTGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	96795631	96786783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378
ENSMUSG00000021670.15_96786784_96796735_1	chr13	-	2369	14	ISM	ENSMUSG00000021670.15	ENST00000680160.1	4243	19	6483	1296	6483	-629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGATCAGTGTGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	96796735	96786783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788408_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625
ENSMUSG00000021670.15_96786951_96795885_1	chr13	-	2020	12	ISM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	11559	1476	7333	-796	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTTCAGAGACGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	96795885	96786950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724
ENSMUSG00000021670.15_96787523_96796654_1	chr13	-	1970	13	ISM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	10790	2048	6564	339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGTAAGACTTCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	96796654	96787522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625
ENSMUSG00000021670.15_96787587_96796706_1	chr13	-	1958	13	ISM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	10738	2112	6512	275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAGCTGTCCTTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	96796706	96787586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625
ENSMUSG00000021670.15_96787596_96802707_1	chr13	-	2296	17	ISM	ENSMUSG00000021670.15	ENST00000680160.1	4243	19	511	2108	511	266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGGCTGGTGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	96802707	96787595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96787673_96788408_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620
ENSMUSG00000021670.15_96788364_96803095_1	chr13	-	2356	17	FSM	ENSMUSG00000021670.15	ENSMUST00000170287.8	2981	17	123	502	123	-502	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATTGTCTGGCACACA	NA	NA	NA	NA	NA	NA	NA	NA	96803095	96788363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028
ENSMUSG00000021670.15_96792084_96807393_1	chr13	-	1949	14	ISM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	51	6609	51	-4222	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGGCCTTTGATAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	96807393	96792083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ENSMUSG00000021671.10_96533209_96551126_1	chr13	+	1156	7	NNC	ENSMUSG00000021671.10	novel	1217	7	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1902	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTGTGTTCACACTC	NA	NA	NA	NA	NA	NA	NA	NA	96533208	96551126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_96533331_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96550986
ENSMUSG00000021671.10_96533209_96551126_2	chr13	+	1154	7	NNC	ENSMUSG00000021671.10	novel	1217	7	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1866	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTGTGTTCACACTC	NA	NA	NA	NA	NA	NA	NA	NA	96533208	96551126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_96533339_96535201_96535379_96537257_96537363_96538093_96538264_96539387_96539542_96540913_96541192_96550986
ENSMUSG00000021671.10_96533262_96551126_1	chr13	+	1105	7	NNC	ENSMUSG00000021671.10	novel	1217	7	NA	NA	106	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTGTGTTCACACTC	NA	NA	NA	NA	NA	NA	NA	NA	96533261	96551126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540919_96541192_96550986
ENSMUSG00000021671.10_96533262_96551126_2	chr13	+	1111	7	FSM	ENSMUSG00000021671.10	ENST00000510798.5	1217	7	106	0	106	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTGTGTTCACACTC	NA	NA	NA	NA	NA	NA	NA	NA	96533261	96551126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96550986
ENSMUSG00000021671.10_96539395_96552496_1	chr13	+	2112	4	ISM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	14593	1749	6239	1370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGCAGTTAAAAATACTG	NA	NA	NA	NA	NA	NA	NA	NA	96539394	96552496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96539542_96540913_96541192_96547097_96547275_96550986
ENSMUSG00000021681.9_95488112_95490534_1	chr13	-	276	3	ISM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	21326	921	21326	-921	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACAAAGCCCGGGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	95490534	95488111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_95488211_95489254_95489355_95490457
ENSMUSG00000021681.9_95498996_95501340_1	chr13	-	297	3	ISM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	10520	11805	10520	-11805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCGCTGTTAGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	95501340	95498995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_95499029_95499344_95499457_95501188
ENSMUSG00000021681.9_95501340_95504999_1	chr13	-	283	2	ISM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	6861	14149	6861	-14149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACTCAGCGTCATCTAA	NA	NA	NA	NA	NA	NA	NA	NA	95504999	95501339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_95501511_95504887
ENSMUSG00000021681.9_95504935_95506040_1	chr13	-	278	2	ISM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	5820	17744	5820	-17744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGAGAAGAAAGGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	95506040	95504934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_95505077_95505904
ENSMUSG00000021681.9_95505030_95507327_1	chr13	-	272	3	ISM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	4533	17839	4533	-17839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGTGGAGAGTGGTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	95507327	95505029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_95505077_95505904_95506067_95507264
ENSMUSG00000021686.7_94495659_94591948_1	chr13	+	1364	14	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	191	110877	191	-110877	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGCCTGCACAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	94495658	94591948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903
ENSMUSG00000021686.7_94531226_94599080_1	chr13	+	1450	13	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	35758	103745	35758	-103745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGACTGATGCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	94531225	94599080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903
ENSMUSG00000021686.7_94540453_94608246_1	chr13	+	1343	12	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	44985	94579	44985	-94579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCGCACACGATTTATTAG	NA	NA	NA	NA	NA	NA	NA	NA	94540452	94608246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183
ENSMUSG00000021686.7_94545297_94609361_1	chr13	+	1347	12	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	49829	93464	49829	-93464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGTACCTGGAATTATCTA	NA	NA	NA	NA	NA	NA	NA	NA	94545296	94609361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306
ENSMUSG00000021686.7_94554540_94613512_1	chr13	+	1336	12	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	59072	89313	59072	-89313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCCATGAAGAAATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	94554539	94613512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473
ENSMUSG00000021686.7_94576786_94616300_1	chr13	+	1391	12	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	81318	86525	81318	-86525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGACAGCGAGACCGGA	NA	NA	NA	NA	NA	NA	NA	NA	94576785	94616300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234
ENSMUSG00000021686.7_94576859_94616328_1	chr13	+	1346	12	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	81391	86497	81391	-86497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCGGAACGCCAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	94576858	94616328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234
ENSMUSG00000021686.7_94580490_94619789_1	chr13	+	1343	12	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	85022	83036	85022	-83036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATGGAAGACAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	94580489	94619789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720
ENSMUSG00000021686.7_94587550_94664742_1	chr13	+	1358	11	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	92082	38083	92082	-38083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCCACTACTGCTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	94587549	94664742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672
ENSMUSG00000021686.7_94598904_94668574_1	chr13	+	1451	10	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	103436	34251	103436	-34251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTCAGTTGTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	94598903	94668574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489
ENSMUSG00000021686.7_94608290_94684375_1	chr13	+	1379	11	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	112822	18450	112822	-18450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCCAGCCAAGATAACGT	NA	NA	NA	NA	NA	NA	NA	NA	94608289	94684375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262
ENSMUSG00000021686.7_94613539_94702328_1	chr13	+	1344	10	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	118071	497	118071	-497	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTTTCATTTATAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	94613538	94702328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ENSMUSG00000021686.7_94616361_94702518_1	chr13	+	1310	9	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	120893	307	120893	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCCTCCGACTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	94616360	94702518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ENSMUSG00000021686.7_94619752_94702627_1	chr13	+	1366	8	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	124284	198	124284	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACGTGTCCGCATGGC	NA	NA	NA	NA	NA	NA	NA	NA	94619751	94702627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ENSMUSG00000021686.7_94619814_94702680_1	chr13	+	1357	8	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	124346	145	124346	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTTTTCAAAAATAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	94619813	94702680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ENSMUSG00000021687.15_94339104_94344737_1	chr13	-	1662	2	ISM	ENSMUSG00000021687.15	ENSMUST00000153558.8	1255	8	38329	-1151	38329	778	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACTTTAAACAAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	94344737	94339103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_94340672_94344643
ENSMUSG00000021687.15_94339364_94361538_1	chr13	-	1664	4	ISM	ENSMUSG00000021687.15	ENSMUST00000153558.8	1255	8	21528	-891	21528	518	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTTACTTTTAAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	94361538	94339363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402
ENSMUSG00000021687.15_94339577_94368650_1	chr13	-	1675	6	ISM	ENSMUSG00000021687.15	ENSMUST00000153558.8	1255	8	14416	-678	14416	305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	94368650	94339576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579
ENSMUSG00000021687.15_94339882_94421885_1	chr13	-	1743	9	FSM	ENSMUSG00000021687.15	ENSMUST00000022197.15	4259	9	452	2064	452	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTTTGGGTTCTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	94421885	94339881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
ENSMUSG00000021687.15_94340255_94422113_1	chr13	-	1598	9	FSM	ENSMUSG00000021687.15	ENSMUST00000022197.15	4259	9	224	2437	224	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTCCTCAGATTATT	NA	NA	NA	NA	NA	NA	NA	NA	94422113	94340254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
ENSMUSG00000021693.21_107097128_107115509_1	chr13	-	2643	10	ISM	ENSMUSG00000021693.21	ENSMUST00000117423.9	2023	20	17755	-1503	17755	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGCTTATTAATAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	107115509	107097127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479
ENSMUSG00000021693.21_107097252_107116067_1	chr13	-	2636	11	ISM	ENSMUSG00000021693.21	ENSMUST00000117423.9	2023	20	17197	-1379	17197	-325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCATGAGCCAGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	107116067	107097251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984
ENSMUSG00000021693.21_107097354_107119093_1	chr13	-	2604	12	ISM	ENSMUSG00000021693.21	ENSMUST00000117423.9	2023	20	14171	-1277	14171	414	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACTATCTAGTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	107119093	107097353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031
ENSMUSG00000021693.21_107097534_107121600_1	chr13	-	2609	14	ISM	ENSMUSG00000021693.21	ENSMUST00000117423.9	2023	20	11664	-1097	11664	234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTATGTGATGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	107121600	107097533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571
ENSMUSG00000021693.21_107097568_107100955_1	chr13	-	1272	2	ISM	ENSMUSG00000021693.21	ENSMUST00000117423.9	2023	20	32309	-1063	32309	200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATGAGGCAGGTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	107100955	107097567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107098733_107100848
ENSMUSG00000021693.21_107097588_107121650_1	chr13	-	2605	14	ISM	ENSMUSG00000021693.21	ENSMUST00000117423.9	2023	20	11614	-1043	11614	180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTGAGAAGTGTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	107121650	107097587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571
ENSMUSG00000021693.21_107097768_107105296_1	chr13	-	1354	4	ISM	ENSMUSG00000021693.21	ENSMUST00000117423.9	2023	20	27968	-863	27968	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGACTAATAGTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	107105296	107097767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145
ENSMUSG00000021693.21_107097768_107124583_1	chr13	-	2666	16	ISM	ENSMUSG00000021693.21	ENST00000676413.1	4165	20	34273	841	8681	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGACTAATAGTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	107124583	107097767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460
ENSMUSG00000021693.21_107097935_107129709_1	chr13	-	2593	18	ISM	ENSMUSG00000021693.21	ENST00000676413.1	4165	20	29147	1008	3555	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATCTGGAATTATGT	NA	NA	NA	NA	NA	NA	NA	NA	107129709	107097934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670
ENSMUSG00000021693.21_107097989_107129760_1	chr13	-	2590	18	ISM	ENSMUSG00000021693.21	ENST00000676413.1	4165	20	29096	1062	3504	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTAAAGTCTGTGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	107129760	107097988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670
ENSMUSG00000021693.21_107098067_107129787_1	chr13	-	2539	18	ISM	ENSMUSG00000021693.21	ENST00000676413.1	4165	20	29069	1140	3477	293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATTTTTACTGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	107129787	107098066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670
ENSMUSG00000021693.21_107098192_107115543_1	chr13	-	1265	8	ISM	ENSMUSG00000021693.21	ENST00000674916.1	3763	18	43313	1265	17721	168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGAGACACTCGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	107115543	107098191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107114531_107114624_107115479
ENSMUSG00000021693.21_107098192_107116077_1	chr13	-	1358	9	ISM	ENSMUSG00000021693.21	ENST00000674916.1	3763	18	42779	1265	17187	168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGAGACACTCGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	107116077	107098191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107114531_107114624_107115479_107115544_107115984
ENSMUSG00000021693.21_107098192_107158535_1	chr13	-	2579	20	FSM	ENSMUSG00000021693.21	ENST00000676413.1	4165	20	321	1265	63	168	multi-exon	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGAGACACTCGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	107158535	107098191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158465
ENSMUSG00000021693.21_107098360_107119196_1	chr13	-	1353	10	ISM	ENSMUSG00000021693.21	ENST00000674916.1	3763	18	39660	1433	14068	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTTGCCAATTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	107119196	107098359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107114531_107114624_107115479_107115544_107115984_107116076_107119031
ENSMUSG00000021693.21_107098360_107158724_1	chr13	-	2600	20	FSM	ENSMUSG00000021693.21	ENST00000676413.1	4165	20	132	1433	-90	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTTGCCAATTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	107158724	107098359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158465
ENSMUSG00000021693.21_107098490_107119741_1	chr13	-	1263	11	ISM	ENSMUSG00000021693.21	ENST00000674916.1	3763	18	39115	1563	13523	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACATTTCAATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	107119741	107098489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699
ENSMUSG00000021693.21_107098631_107123877_1	chr13	-	1332	13	ISM	ENSMUSG00000021693.21	ENST00000674916.1	3763	18	34979	1704	9387	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGATCCCCAGAATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	107123877	107098630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776
ENSMUSG00000021693.21_107100845_107124585_1	chr13	-	1359	13	ISM	ENSMUSG00000021693.21	ENST00000674916.1	3763	18	34271	3918	8679	-2214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTCCATCTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	107124585	107100844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460
ENSMUSG00000021693.21_107100953_107126569_1	chr13	-	1273	14	ISM	ENSMUSG00000021693.21	ENST00000674916.1	3763	18	32287	4026	6695	-2322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCTAGAGATGACTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	107126569	107100952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545
ENSMUSG00000021693.21_107101590_107129742_1	chr13	-	1280	14	ISM	ENSMUSG00000021693.21	ENST00000674916.1	3763	18	29114	4663	3522	-2959	internal_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTCTCCCAGATGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	107129742	107101589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670
ENSMUSG00000021693.21_107105215_107130443_1	chr13	-	1306	14	ISM	ENSMUSG00000021693.21	ENST00000674916.1	3763	18	28413	8288	2821	-6584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAGACACAGTGGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	107130443	107105214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107105297_107111002_107111071_107111878_107111990_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355
ENSMUSG00000021693.21_107111002_107158535_1	chr13	-	1248	14	ISM	ENSMUSG00000021693.21	ENST00000674916.1	3763	18	321	14075	63	-12371	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAAGCGATTCCTACAT	NA	NA	NA	NA	NA	NA	NA	NA	107158535	107111001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107111071_107111878_107111990_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ENSMUSG00000021693.21_107111879_107158724_1	chr13	-	1368	13	ISM	ENSMUSG00000021693.21	ENST00000674916.1	3763	18	132	14952	-90	-13248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGGCTTTGGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	107158724	107111878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_107111990_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ENSMUSG00000021699.18_109769314_110074535_1	chr13	+	998	10	ISM	ENSMUSG00000021699.18	ENST00000405755.6	2306	15	78	13468	78	-13343	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTTTGATTACGTATC	NA	NA	NA	NA	NA	NA	NA	NA	109769313	110074535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_109769445_109876920_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500
ENSMUSG00000021699.18_109876918_110074665_1	chr13	+	1000	9	ISM	ENSMUSG00000021699.18	ENSMUST00000074103.12	2167	15	54228	13343	54228	-13213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGGCTCTTGTCTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	109876917	110074665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500
ENSMUSG00000021699.18_109877067_110075838_1	chr13	+	894	10	ISM	ENSMUSG00000021699.18	ENSMUST00000074103.12	2167	15	54377	12170	54377	-12040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAATACATGATGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	109877066	110075838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795
ENSMUSG00000021699.18_109906081_110084882_1	chr13	+	964	9	ISM	ENSMUSG00000021699.18	ENSMUST00000074103.12	2167	15	83391	3126	83391	-2996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACCAAAAAGCAAAGACAAT	NA	NA	NA	NA	NA	NA	NA	NA	109906080	110084882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773
ENSMUSG00000021701.9_110531770_110533171_1	chr13	+	474	4	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	190	4207	190	-4207	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCGATACTACCTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	110531769	110533171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_110531972_110532548_110532657_110532809_110532927_110533124
ENSMUSG00000021701.9_110531874_110533501_1	chr13	+	514	5	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	294	3877	294	-3877	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGAACCACTGGAACACA	NA	NA	NA	NA	NA	NA	NA	NA	110531873	110533501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_110531972_110532548_110532657_110532809_110532927_110533124_110533255_110533440
ENSMUSG00000021701.9_110532808_110534258_1	chr13	+	470	5	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	1228	3120	1228	-3120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAATCTGAAAGAAACGTA	NA	NA	NA	NA	NA	NA	NA	NA	110532807	110534258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_110532927_110533124_110533255_110533440_110533529_110534004_110534101_110534221
ENSMUSG00000021701.9_110533124_110534420_1	chr13	+	514	4	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	1544	2958	1544	-2958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGCTCTTTGACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	110533123	110534420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_110533255_110533440_110533529_110534004_110534101_110534221
ENSMUSG00000021701.9_110533228_110534570_1	chr13	+	473	5	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	1648	2808	1648	-2808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCAGCCAAGAATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	110533227	110534570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_110533255_110533440_110533529_110534004_110534101_110534221_110534421_110534507
ENSMUSG00000021701.9_110534331_110535569_1	chr13	+	481	5	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	2751	1809	2751	-1809	internal_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGGAAGTGTGGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	110534330	110535569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_110534421_110534507_110534656_110534906_110535005_110535212_110535343_110535554
ENSMUSG00000021701.9_110534971_110535952_1	chr13	+	444	4	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	3391	1426	3391	-1426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCAGCAACAGATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	110534970	110535952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_110535005_110535212_110535343_110535554_110535796_110535913
ENSMUSG00000021701.9_110535311_110536350_1	chr13	+	457	4	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	3731	1028	3731	-1028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGGTTAAAGTCTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	110535310	110536350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_110535343_110535554_110535796_110535913_110536044_110536296
ENSMUSG00000021701.9_110535573_110536582_1	chr13	+	480	4	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	3993	796	3993	-796	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCATACAAAAATCATCATC	NA	NA	NA	NA	NA	NA	NA	NA	110535572	110536582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_110535796_110535913_110536044_110536296_110536408_110536566
ENSMUSG00000021701.9_110535633_110536640_1	chr13	+	478	4	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	4053	738	4053	-738	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGACAGGATCTCTACAA	NA	NA	NA	NA	NA	NA	NA	NA	110535632	110536640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_110535796_110535913_110536044_110536296_110536408_110536566
ENSMUSG00000021701.9_110535745_110536725_1	chr13	+	451	4	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	4165	653	4165	-653	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGAACATGCTCTTACA	NA	NA	NA	NA	NA	NA	NA	NA	110535744	110536725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_110535796_110535913_110536044_110536296_110536408_110536566
ENSMUSG00000021701.9_110536335_110536944_1	chr13	+	451	2	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	4755	434	4755	-434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGACTTTGGACAATC	NA	NA	NA	NA	NA	NA	NA	NA	110536334	110536944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_110536408_110536566
ENSMUSG00000021701.9_110536380_110537000_1	chr13	+	462	2	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	4800	378	4800	-378	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCGTGAAAAGGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	110536379	110537000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_110536408_110536566
ENSMUSG00000021707.6_92491234_92522323_1	chr13	+	2109	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	0	3238	0	-3238	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATACCAGGTCCTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	92491233	92522323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ENSMUSG00000021707.6_92491340_92522463_1	chr13	+	2143	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	106	3098	106	-3098	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	NA	NA	NA	NA	NA	NA	NA	NA	92491339	92522463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ENSMUSG00000021707.6_92492177_92522943_1	chr13	+	2091	5	ISM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	943	2618	943	-2618	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGCAGCAGTAGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	92492176	92522943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ENSMUSG00000021707.6_92502185_92523155_1	chr13	+	2154	3	ISM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	10951	2406	10951	-2406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATGTGCTCGGCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	92502184	92523155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_92502300_92504692_92504809_92521232
ENSMUSG00000021709.15_103957191_103970599_1	chr13	-	1093	5	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	55196	0	55196	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGGGGAAGATAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	103970599	103957190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961435_103970005
ENSMUSG00000021709.15_103957191_103970712_1	chr13	-	1206	5	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	55083	0	55083	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGGGGAAGATAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	103970712	103957190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961435_103970005
ENSMUSG00000021709.15_103957236_103970779_1	chr13	-	1228	5	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	55016	45	55016	-45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCATTGTACGAGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	103970779	103957235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961435_103970005
ENSMUSG00000021709.15_103959899_103970982_1	chr13	-	1200	3	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	54813	2708	54813	-2708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGATCCAGAACTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	103970982	103959898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103959915_103961227_103961435_103970005
ENSMUSG00000021709.15_103961340_103971096_1	chr13	-	1186	2	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	54699	4149	54699	-4149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCTCTAGAGAACAACTAA	NA	NA	NA	NA	NA	NA	NA	NA	103971096	103961339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103961435_103970005
ENSMUSG00000021709.15_103961401_103971152_1	chr13	-	1181	2	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	54643	4210	54643	-4210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGCCTCAGGCACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	103971152	103961400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103961435_103970005
ENSMUSG00000021709.15_103970601_103977731_1	chr13	-	1190	3	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	48064	13410	48064	-13410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCGCCTTCCAAGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	103977731	103970600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103971537_103975814_103975999_103977661
ENSMUSG00000021709.15_103971006_103982034_1	chr13	-	1194	6	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	43761	13815	43761	-13815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAACATGGAGACTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	103982034	103971005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981331_103981496_103982011
ENSMUSG00000021709.15_103971307_103993528_1	chr13	-	1188	9	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	32267	14116	32267	-14116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATATTTTTCAACCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	103993528	103971306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981331_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502
ENSMUSG00000021709.15_103971480_103994006_1	chr13	-	1193	10	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	31789	14289	31789	-14289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAGAGGAAAAATTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	103994006	103971479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981331_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918
ENSMUSG00000021709.15_103975981_103996014_1	chr13	-	1216	11	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	29781	18790	29781	-18790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTATCCGATGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	103996014	103975980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103975999_103977661_103977777_103979964_103980142_103981331_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883
ENSMUSG00000021709.15_103977706_103996608_1	chr13	-	1198	11	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	29187	20515	29187	-20515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAATCAGCCCAAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	103996608	103977705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103977777_103979964_103980142_103981331_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578
ENSMUSG00000021709.15_103979964_103998851_1	chr13	-	1237	11	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	26944	22773	26944	-22773	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAACTTCATTCTGACATA	NA	NA	NA	NA	NA	NA	NA	NA	103998851	103979963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103980142_103981331_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787
ENSMUSG00000021709.15_103980074_104003210_1	chr13	-	1181	12	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	22585	22883	22585	-22883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTGAGCCTGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	104003210	103980073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103980142_103981331_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156
ENSMUSG00000021709.15_103987306_104022785_1	chr13	-	1201	13	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	3010	30115	3010	-30115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGGTGCTTACTAATT	NA	NA	NA	NA	NA	NA	NA	NA	104022785	103987305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648
ENSMUSG00000021710.12_104159565_104205802_1	chr13	-	3654	11	ISM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	40320	0	40292	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGAGCTCACAGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	104205802	104159564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702
ENSMUSG00000021710.12_104159730_104205851_1	chr13	-	3538	11	ISM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	40271	165	40243	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAGAAAAAGAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	104205851	104159729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702
ENSMUSG00000021710.12_104159916_104209530_1	chr13	-	3612	12	ISM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	36592	351	36564	-351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTTTGTTTATGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	104209530	104159915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270
ENSMUSG00000021710.12_104160042_104246094_1	chr13	-	3657	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	28	477	0	-477	multi-exon	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCCTGGCAGGAAACGA	NA	NA	NA	NA	NA	NA	NA	NA	104246094	104160041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ENSMUSG00000021711.18_104278664_104286691_1	chr13	-	2672	5	ISM	ENSMUSG00000021711.18	ENSMUST00000141557.8	3502	13	28242	0	28224	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAAGGATCTGAGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	104286691	104278663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557
ENSMUSG00000021711.18_104278907_104297526_1	chr13	-	2605	8	NNC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	17389	-243	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTGATGAATGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	104297526	104278906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290797_104290849_104291344_104291418_104297474
ENSMUSG00000021711.18_104278932_104297566_1	chr13	-	2629	8	NNC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	17349	-268	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTGCCCCTCACATACA	NA	NA	NA	NA	NA	NA	NA	NA	104297566	104278931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290788_104290849_104291344_104291418_104297474
ENSMUSG00000021711.18_104278936_104297552_1	chr13	-	2614	9	ISM	ENSMUSG00000021711.18	ENSMUST00000141557.8	3502	13	17381	272	17363	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGACTTGCCCCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	104297552	104278935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474
ENSMUSG00000021711.18_104279054_104303434_1	chr13	-	2614	10	ISM	ENSMUSG00000021711.18	ENSMUST00000141557.8	3502	13	11499	390	11481	-390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATGAAATAAAAAAATTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	104303434	104279053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366
ENSMUSG00000021711.18_104279197_104306354_1	chr13	-	2603	11	NNC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	8561	-533	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCAATTAAGAGCGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	104306354	104279196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290797_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327
ENSMUSG00000021711.18_104279283_104314672_1	chr13	-	2622	13	FSM	ENSMUSG00000021711.18	ENSMUST00000141557.8	3502	13	261	619	243	542	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTTAAATAAACTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	104314672	104279282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUSG00000021711.18_104279309_104314690_1	chr13	-	2602	12	NNC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	225	516	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTATTAGGGAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	104314690	104279308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290797_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUSG00000021711.18_104279348_104314713_1	chr13	-	2598	13	FSM	ENSMUSG00000021711.18	ENSMUST00000141557.8	3502	13	220	684	202	477	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAACAGCTTTGCAATAGG	NA	NA	NA	NA	NA	NA	NA	NA	104314713	104279347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUSG00000021711.18_104279372_104314782_1	chr13	-	2631	12	NNC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	133	453	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAATCAGCAAGAAAACTAA	NA	NA	NA	NA	NA	NA	NA	NA	104314782	104279371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290797_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUSG00000021711.18_104279408_104314915_1	chr13	-	2740	13	FSM	ENSMUSG00000021711.18	ENSMUST00000141557.8	3502	13	18	744	0	417	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATCTTTAAAAAAATTACAA	NA	NA	NA	NA	NA	NA	NA	NA	104314915	104279407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUSG00000021711.18_104280655_104303433_1	chr13	-	997	9	ISM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	11544	1998	11482	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCCTAAAGAAAATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	104303433	104280654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366
ENSMUSG00000021711.18_104280912_104306396_1	chr13	-	1085	10	ISM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	8581	2255	8519	-450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTGCTGTTCAGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	104306396	104280911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327
ENSMUSG00000021711.18_104284698_104314915_1	chr13	-	1021	9	ISM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	62	6041	0	-4236	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCGGCATAATTAAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	104314915	104284697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUSG00000021712.16_104315347_104324700_1	chr13	+	819	5	ISM	ENSMUSG00000021712.16	ENST00000274327.11	1807	12	-20	14667	0	-13856	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGGAGAACAAATAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	104315346	104324700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568
ENSMUSG00000021712.16_104317583_104326190_1	chr13	+	766	5	ISM	ENSMUSG00000021712.16	ENSMUST00000069174.6	4258	10	1977	12366	1977	-12366	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGATCATGTGTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	104317582	104326190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170
ENSMUSG00000021712.16_104317638_104326242_1	chr13	+	763	5	ISM	ENSMUSG00000021712.16	ENSMUST00000069174.6	4258	10	2032	12314	2032	-12314	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTCAAGAAGAAATGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	104317637	104326242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170
ENSMUSG00000021712.16_104317689_104326298_1	chr13	+	768	5	ISM	ENSMUSG00000021712.16	ENSMUST00000069174.6	4258	10	2083	12258	2083	-12258	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCTTAGGCAGCAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	104317688	104326298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170
ENSMUSG00000021712.16_104321304_104328659_1	chr13	+	865	5	ISM	ENSMUSG00000021712.16	ENSMUST00000069174.6	4258	10	5698	9897	5698	-9897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTACTGTCCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	104321303	104328659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524
ENSMUSG00000021712.16_104324042_104334584_1	chr13	+	767	5	ISM	ENSMUSG00000021712.16	ENSMUST00000069174.6	4258	10	8436	3972	8436	-3972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTTAAAACAAGATGAATT	NA	NA	NA	NA	NA	NA	NA	NA	104324041	104334584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497
ENSMUSG00000021712.16_104324146_104335146_1	chr13	+	751	6	ISM	ENSMUSG00000021712.16	ENSMUST00000069174.6	4258	10	8540	3410	8540	-3410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGATGTGGGTGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	104324145	104335146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101
ENSMUSG00000021712.16_104324600_104336606_1	chr13	+	774	6	ISM	ENSMUSG00000021712.16	ENSMUST00000069174.6	4258	10	8994	1950	8994	-1950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACAGAATTAGTGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	104324599	104336606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576
ENSMUSG00000021712.16_104324663_104336651_1	chr13	+	756	6	ISM	ENSMUSG00000021712.16	ENSMUST00000069174.6	4258	10	9057	1905	9057	-1905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGAAAAAGAACTCCGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	104324662	104336651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576
ENSMUSG00000021712.16_104324720_104336701_1	chr13	+	749	6	ISM	ENSMUSG00000021712.16	ENSMUST00000069174.6	4258	10	9114	1855	9114	-1855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGAATTTTTATATCAA	NA	NA	NA	NA	NA	NA	NA	NA	104324719	104336701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576
ENSMUSG00000021712.16_104326205_104339221_1	chr13	+	777	7	ISM	ENSMUSG00000021712.16	ENST00000274327.11	1807	12	10838	146	10599	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTGCCATTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	104326204	104339221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738_104337816_104339204
ENSMUSG00000021712.16_104326252_104339278_1	chr13	+	787	7	ISM	ENSMUSG00000021712.16	ENST00000274327.11	1807	12	10885	89	10646	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATATGTAATACTTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	104326251	104339278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738_104337816_104339204
ENSMUSG00000021712.16_104326321_104339316_1	chr13	+	756	7	ISM	ENSMUSG00000021712.16	ENST00000274327.11	1807	12	10954	51	10715	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGATTTTAGTAACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	104326320	104339316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738_104337816_104339204
ENSMUSG00000021713.10_104341878_104356857_1	chr13	-	1419	7	ISM	ENSMUSG00000021713.10	ENST00000538977.5	2009	10	8481	8	8473	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	104356857	104341877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544
ENSMUSG00000021713.10_104342073_104359413_1	chr13	-	1427	8	ISM	ENSMUSG00000021713.10	ENST00000538977.5	2009	10	5925	203	5917	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCCCAAAACCGATAAGC	NA	NA	NA	NA	NA	NA	NA	NA	104359413	104342072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345
ENSMUSG00000021713.10_104342130_104359457_1	chr13	-	1414	8	ISM	ENSMUSG00000021713.10	ENST00000538977.5	2009	10	5881	260	5873	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGGAAGAGTGACTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	104359457	104342129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345
ENSMUSG00000021713.10_104343607_104359700_1	chr13	-	1498	8	ISM	ENSMUSG00000021713.10	ENST00000538977.5	2009	10	5638	1737	5630	-1737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATAACACATTATCT	NA	NA	NA	NA	NA	NA	NA	NA	104359700	104343606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599
ENSMUSG00000021713.10_104343737_104365169_1	chr13	-	1424	9	ISM	ENSMUSG00000021713.10	ENST00000538977.5	2009	10	169	1867	161	-1867	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGGGGAGGAGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	104365169	104343736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104365113
ENSMUSG00000021713.10_104343773_104365274_1	chr13	-	1493	9	ISM	ENSMUSG00000021713.10	ENST00000538977.5	2009	10	64	1903	56	-1903	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGATCCAACAGGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	104365274	104343772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104365113
ENSMUSG00000021714.16_104366049_104386125_1	chr13	+	1064	10	FSM	ENSMUSG00000021714.16	ENSMUST00000022227.8	1217	10	153	0	153	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATAGTTTGTCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	104366048	104386125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_104366165_104367236_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
ENSMUSG00000021715.13_104767648_104953461_1	chr13	-	2065	14	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGCCTCCCGCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	104953461	104767647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_104768247_104794536_104794641_104797814_104797919_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ENSMUSG00000021715.13_104767648_104953461_2	chr13	-	2066	14	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGCCTCCCGCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	104953461	104767647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941430_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ENSMUSG00000021715.13_104767648_104953461_3	chr13	-	2066	14	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGCCTCCCGCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	104953461	104767647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857023_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ENSMUSG00000021715.13_104767648_104953461_4	chr13	-	2066	14	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGCCTCCCGCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	104953461	104767647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929150_104932913_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ENSMUSG00000021715.13_104767648_104953461_5	chr13	-	2066	14	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGCCTCCCGCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	104953461	104767647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938644_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ENSMUSG00000021715.13_104767648_104953461_6	chr13	-	2068	14	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGCCTCCCGCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	104953461	104767647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941518_104943140_104943289_104944227_104944341_104947724_104947822_104953194
ENSMUSG00000021716.15_104953685_104974988_1	chr13	+	1571	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	0	794	0	-794	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGATAATCAATGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	104953684	104974988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
ENSMUSG00000021716.15_104953747_104975061_1	chr13	+	1582	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	62	721	62	-721	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGATTTCCATTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	104953746	104975061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
ENSMUSG00000021716.15_104953747_104975177_1	chr13	+	1698	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	62	605	62	-605	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTAAGTGTCTCTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	104953746	104975177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
ENSMUSG00000021716.15_104970756_104975305_1	chr13	+	1506	2	ISM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	17071	477	17071	-477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAACAGCCCCGAAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	104970755	104975305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_104970829_104973872
ENSMUSG00000021716.15_104970769_104975403_1	chr13	+	1591	2	ISM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	17084	379	17084	-379	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGAGATGCGTACACT	NA	NA	NA	NA	NA	NA	NA	NA	104970768	104975403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_104970829_104973872
ENSMUSG00000021725.10_116991497_117005079_1	chr13	-	808	7	ISM	ENSMUSG00000021725.10	ENST00000514067.6	2827	25	156840	48	156840	-48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAACTGAAGTTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	117005079	116991496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_116991829_116998745_116998831_116999610_116999681_117000721_117000796_117003571_117003642_117004661_117004735_117004975
ENSMUSG00000021725.10_116999637_117032317_1	chr13	-	1482	13	ISM	ENSMUSG00000021725.10	ENST00000514342.6	2376	23	129642	0	129602	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATGCATAGCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	117032317	116999636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_116999681_117000721_117000796_117003571_117003642_117004661_117004735_117004975_117005089_117005958_117006008_117008178_117008247_117013066_117013133_117015530_117015624_117029535_117029632_117029732_117029784_117031171_117031731_117032191
ENSMUSG00000021725.10_117000722_117039395_1	chr13	-	1508	13	ISM	ENSMUSG00000021725.10	ENST00000514342.6	2376	23	122564	1085	122524	-1085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTAGTCACTCACAAG	NA	NA	NA	NA	NA	NA	NA	NA	117039395	117000721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_117000796_117003571_117003642_117004661_117004735_117004975_117005089_117005958_117006008_117008178_117008247_117013066_117013133_117015530_117015624_117029535_117029632_117029732_117029784_117031171_117031731_117032191_117032318_117039325
ENSMUSG00000021725.10_117003571_117047491_1	chr13	-	1523	13	ISM	ENSMUSG00000021725.10	ENST00000514342.6	2376	23	114468	3934	114428	-3934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCTGCATTTCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	117047491	117003570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_117003642_117004661_117004735_117004975_117005089_117005958_117006008_117008178_117008247_117013066_117013133_117015530_117015624_117029535_117029632_117029732_117029784_117031171_117031731_117032191_117032318_117039325_117039393_117047400
ENSMUSG00000021725.10_117004662_117047984_1	chr13	-	1517	13	ISM	ENSMUSG00000021725.10	ENST00000514342.6	2376	23	113975	5025	113935	-5025	internal_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTTTTTTTTTGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	117047984	117004661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_117004735_117004975_117005089_117005958_117006008_117008178_117008247_117013066_117013133_117015530_117015624_117029535_117029632_117029732_117029784_117031171_117031731_117032191_117032318_117039325_117039393_117047400_117047492_117047919
ENSMUSG00000021725.10_117004976_117059203_1	chr13	-	1538	13	ISM	ENSMUSG00000021725.10	ENST00000514342.6	2376	23	102756	5339	102716	-5339	internal_fragment	TRUE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACAGCTGCGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	117059203	117004975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_117005089_117005958_117006008_117008178_117008247_117013066_117013133_117015530_117015624_117029535_117029632_117029732_117029784_117031171_117031731_117032191_117032318_117039325_117039393_117047400_117047492_117047919_117047981_117059105
ENSMUSG00000021725.10_117005959_117061581_1	chr13	-	1502	13	ISM	ENSMUSG00000021725.10	ENST00000514342.6	2376	23	100378	6322	100338	-6322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTATGTTTTCATATA	NA	NA	NA	NA	NA	NA	NA	NA	117061581	117005958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_117006008_117008178_117008247_117013066_117013133_117015530_117015624_117029535_117029632_117029732_117029784_117031171_117031731_117032191_117032318_117039325_117039393_117047400_117047492_117047919_117047981_117059105_117059201_117061501
ENSMUSG00000021725.10_117008178_117063126_1	chr13	-	1526	13	ISM	ENSMUSG00000021725.10	ENST00000514342.6	2376	23	98833	8541	98793	-8541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGACTGTAGTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	117063126	117008177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_117008247_117013066_117013133_117015530_117015624_117029535_117029632_117029732_117029784_117031171_117031731_117032191_117032318_117039325_117039393_117047400_117047492_117047919_117047981_117059105_117059201_117061501_117061580_117063052
ENSMUSG00000021725.10_117013066_117063930_1	chr13	-	1548	13	ISM	ENSMUSG00000021725.10	ENST00000514342.6	2376	23	98029	13429	97989	-13429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGAAAGTGGTCTCGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	117063930	117013065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_117013133_117015530_117015624_117029535_117029632_117029732_117029784_117031171_117031731_117032191_117032318_117039325_117039393_117047400_117047492_117047919_117047981_117059105_117059201_117061501_117061580_117063052_117063124_117063837
ENSMUSG00000021725.10_117015531_117063927_1	chr13	-	1478	12	ISM	ENSMUSG00000021725.10	ENST00000514342.6	2376	23	98032	15894	97992	-15894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCCGTGCTAATTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	117063927	117015530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_117015624_117029535_117029632_117029732_117029784_117031171_117031731_117032191_117032318_117039325_117039393_117047400_117047492_117047919_117047981_117059105_117059201_117061501_117061580_117063052_117063124_117063837
ENSMUSG00000021725.10_117015531_117075317_1	chr13	-	1516	13	ISM	ENSMUSG00000021725.10	ENST00000514342.6	2376	23	86642	15894	86602	-15894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCCGTGCTAATTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	117075317	117015530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_117015624_117029535_117029632_117029732_117029784_117031171_117031731_117032191_117032318_117039325_117039393_117047400_117047492_117047919_117047981_117059105_117059201_117061501_117061580_117063052_117063124_117063837_117063928_117075279
ENSMUSG00000021725.10_117029550_117161809_1	chr13	-	1562	14	ISM	ENSMUSG00000021725.10	ENST00000514342.6	2376	23	150	29913	110	-29913	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCATGCTTAGGGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	117161809	117029549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_117029632_117029732_117029784_117031171_117031731_117032191_117032318_117039325_117039393_117047400_117047492_117047919_117047981_117059105_117059201_117061501_117061580_117063052_117063124_117063837_117063928_117075279_117075318_117160710_117160766_117161711
ENSMUSG00000021725.10_117031172_117161931_1	chr13	-	1551	12	ISM	ENSMUSG00000021725.10	ENST00000514342.6	2376	23	28	31535	0	-31535	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCGTAAACACTTTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	117161931	117031171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_117031731_117032191_117032318_117039325_117039393_117047400_117047492_117047919_117047981_117059105_117059201_117061501_117061580_117063052_117063124_117063837_117063928_117075279_117075318_117160710_117160766_117161711
ENSMUSG00000021728.9_117356808_117403944_1	chr13	+	1272	6	ISM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	0	7007	0	-7007	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGATGGAGGATCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	117356807	117403944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855
ENSMUSG00000021728.9_117357005_117404050_1	chr13	+	1181	6	ISM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	197	6901	197	-6901	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCATACTTGCCGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	117357004	117404050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855
ENSMUSG00000021728.9_117357120_117405499_1	chr13	+	1185	7	ISM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	312	5452	312	-5452	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTATTTTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	117357119	117405499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465
ENSMUSG00000021728.9_117357252_117409697_1	chr13	+	1225	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	444	1254	444	-1254	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCACAGAAGTAGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	117357251	117409697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
ENSMUSG00000021728.9_117357280_117409766_1	chr13	+	1266	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	472	1185	472	-1185	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTCCATTAAAGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	117357279	117409766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
ENSMUSG00000021728.9_117369276_117409934_1	chr13	+	1207	8	ISM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	12468	1017	12468	-1017	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCGTTTGCCAGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	117369275	117409934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
ENSMUSG00000021728.9_117386272_117410237_1	chr13	+	1205	6	ISM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	29464	714	29464	-714	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTTAAGTAGAACATTT	NA	NA	NA	NA	NA	NA	NA	NA	117386271	117410237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
ENSMUSG00000021728.9_117400970_117410338_1	chr13	+	1216	5	ISM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	44162	613	44162	-613	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTGCATGCCTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	117400969	117410338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
ENSMUSG00000021728.9_117404029_117410579_1	chr13	+	1195	4	ISM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	47221	372	47221	-372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTTGTCAATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	117404028	117410579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_117404136_117405465_117405500_117408580_117408636_117409580
ENSMUSG00000021728.9_117404074_117410641_1	chr13	+	1212	4	ISM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	47266	310	47266	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTGCTGCTGGCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	117404073	117410641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_117404136_117405465_117405500_117408580_117408636_117409580
ENSMUSG00000021731.11_118514917_118523583_1	chr13	-	3114	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	205	0	205	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGAGGCCTGAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	118523583	118514916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ENSMUSG00000021731.11_118515079_118523788_1	chr13	-	3157	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	0	162	0	-162	multi-exon	FALSE	canonical	NA	NA	NA	NA	1630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGAAAAGCCATTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	118523788	118515078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ENSMUSG00000021737.5_8348830_8355504_1	chr14	+	909	6	ISM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	51	2085	51	-2085	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCGCCTCATTACCGA	NA	NA	NA	NA	NA	NA	NA	NA	8348829	8355504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_8349025_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471
ENSMUSG00000021737.5_8348830_8355608_1	chr14	+	1013	6	ISM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	51	1981	51	-1981	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1625	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTGTGGGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	8348829	8355608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_8349025_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471
ENSMUSG00000021737.5_8348960_8355613_1	chr14	+	888	6	ISM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	181	1976	181	-1976	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1041	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGGGTGTGGACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	8348959	8355613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_8349025_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471
ENSMUSG00000021737.5_8348974_8357174_1	chr14	+	916	7	ISM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	195	415	195	-415	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1022	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGCTGGAAGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	8348973	8357174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_8349025_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159
ENSMUSG00000021737.5_8349657_8357417_1	chr14	+	883	7	ISM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	878	172	878	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1059	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGACTTGCTGCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	8349656	8357417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
ENSMUSG00000021737.5_8349657_8357447_1	chr14	+	913	7	ISM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	878	142	878	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATCCAGAGTAATTAAC	NA	NA	NA	NA	NA	NA	NA	NA	8349656	8357447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
ENSMUSG00000021738.6_8366123_8369828_1	chr14	-	1301	2	ISM	ENSMUSG00000021738.6	ENST00000484332.1	2682	9	32233	0	32233	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTCACTCTTGAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	8369828	8366122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_8366457_8368861
ENSMUSG00000021738.6_8368901_8374255_1	chr14	-	1343	4	ISM	ENSMUSG00000021738.6	ENST00000484332.1	2682	9	27806	2778	27806	-2620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGCACAAGGATTGACGAA	NA	NA	NA	NA	NA	NA	NA	NA	8374255	8368900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_8369829_8373447_8373570_8373864_8374064_8374161
ENSMUSG00000021738.6_8368962_8374300_1	chr14	-	1327	4	ISM	ENSMUSG00000021738.6	ENST00000484332.1	2682	9	27761	2839	27761	-2681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTTGCCAAGTTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	8374300	8368961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_8369829_8373447_8373570_8373864_8374064_8374161
ENSMUSG00000021738.6_8369245_8380400_1	chr14	-	1326	6	ISM	ENSMUSG00000021738.6	ENST00000484332.1	2682	9	21661	3122	21661	-2964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCGGCCTCAACTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	8380400	8369244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307
ENSMUSG00000021738.6_8369305_8380458_1	chr14	-	1324	6	ISM	ENSMUSG00000021738.6	ENST00000484332.1	2682	9	21603	3182	21603	-3024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAACTGTGTGGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	8380458	8369304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307
ENSMUSG00000021738.6_8369775_8401933_1	chr14	-	1307	8	ISM	ENSMUSG00000021738.6	ENST00000484332.1	2682	9	128	3652	128	-3494	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGACAAATTCTGTGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	8401933	8369774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307_8380568_8382230_8382481_8401839
ENSMUSG00000021748.10_14296836_14300375_1	chr14	+	744	8	ISM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	88	3402	88	-3263	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGCCTAGAAGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	14296835	14300375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336
ENSMUSG00000021748.10_14296979_14302947_1	chr14	+	756	8	ISM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	231	830	231	-691	internal_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACATCGAAGCCATAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	14296978	14302947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918
ENSMUSG00000021748.10_14298240_14303638_1	chr14	+	1284	7	NNC	ENSMUSG00000021748.10	novel	1284	8	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTAAATTTGCCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	14298239	14303638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_14298351_14298443_14298539_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303161_14303291
ENSMUSG00000021748.10_14298240_14303638_2	chr14	+	1283	8	NNC	ENSMUSG00000021748.10	novel	1284	8	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTAAATTTGCCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	14298239	14303638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_14298351_14298448_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303161_14303291
ENSMUSG00000021748.10_14298240_14303638_3	chr14	+	1288	8	FSM	ENSMUSG00000021748.10	ENST00000474765.1	1284	8	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTAAATTTGCCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	14298239	14303638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303161_14303291
ENSMUSG00000021748.10_14298442_14303337_1	chr14	+	778	7	ISM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	1694	440	198	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGATGTCCCTATGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	14298441	14303337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ENSMUSG00000021748.10_14299362_14303527_1	chr14	+	832	5	ISM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	2614	250	1118	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATGCTGAAGTGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	14299361	14303527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ENSMUSG00000021748.10_14299951_14303777_1	chr14	+	834	4	ISM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	3203	0	1707	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	NA	NA	NA	NA	NA	NA	NA	14299950	14303777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_14300065_14300336_14300429_14302918_14303061_14303291
ENSMUSG00000021751.14_14212839_14244040_1	chr14	+	2099	14	NNC	ENSMUSG00000021751.14	novel	2051	14	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1924	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTCCTATGGCACATAT	NA	NA	NA	NA	NA	NA	NA	NA	14212838	14244040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_14213072_14213615_14213779_14213966_14214119_14214471_14214580_14216210_14216331_14216774_14216849_14218096_14218270_14219706_14219870_14221647_14221839_14223329_14223510_14225955_14226051_14228294_14228513_14239481_14239615_14243944
ENSMUSG00000021751.14_14212839_14244040_2	chr14	+	2107	14	NNC	ENSMUSG00000021751.14	novel	2051	14	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTCCTATGGCACATAT	NA	NA	NA	NA	NA	NA	NA	NA	14212838	14244040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_14213072_14213615_14213779_14213966_14214119_14214471_14214580_14216210_14216331_14216774_14216849_14218096_14218270_14219706_14219870_14221647_14221839_14223329_14223510_14225944_14226051_14228294_14228513_14239481_14239615_14243947
ENSMUSG00000021751.14_14212839_14244040_3	chr14	+	2109	14	NNC	ENSMUSG00000021751.14	novel	2051	14	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTCCTATGGCACATAT	NA	NA	NA	NA	NA	NA	NA	NA	14212838	14244040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_14213072_14213615_14213779_14213966_14214119_14214471_14214580_14216210_14216331_14216774_14216849_14218096_14218269_14219706_14219870_14221647_14221839_14223329_14223510_14225944_14226051_14228294_14228513_14239481_14239615_14243944
ENSMUSG00000021751.14_14212839_14244040_4	chr14	+	2097	14	NNC	ENSMUSG00000021751.14	novel	2051	14	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTCCTATGGCACATAT	NA	NA	NA	NA	NA	NA	NA	NA	14212838	14244040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_14213072_14213615_14213779_14213966_14214119_14214471_14214580_14216210_14216331_14216774_14216849_14218096_14218257_14219706_14219870_14221647_14221839_14223329_14223510_14225944_14226051_14228294_14228513_14239481_14239615_14243944
ENSMUSG00000021751.14_14212839_14244040_5	chr14	+	2110	14	FSM	ENSMUSG00000021751.14	ENST00000459701.6	2051	14	-59	0	-59	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTCCTATGGCACATAT	NA	NA	NA	NA	NA	NA	NA	NA	14212838	14244040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_14213072_14213615_14213779_14213966_14214119_14214471_14214580_14216210_14216331_14216774_14216849_14218096_14218270_14219706_14219870_14221647_14221839_14223329_14223510_14225944_14226051_14228294_14228513_14239481_14239615_14243944
ENSMUSG00000021752.15_14246210_14255633_1	chr14	-	1645	3	NNC	ENSMUSG00000021752.15	novel	1650	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGGTTGTATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	14255633	14246209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_14247582_14249552_14249623_14255430
ENSMUSG00000021756.13_112616517_112630205_1	chr13	+	988	6	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	4920	10774	4920	-7470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAAGAAAGATAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	112616516	112630205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122
ENSMUSG00000021756.13_112616631_112631126_1	chr13	+	888	7	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	5034	9853	5034	-6549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGCCAATGGGAAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	112616630	112631126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112
ENSMUSG00000021756.13_112616681_112631179_1	chr13	+	891	7	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	5084	9800	5084	-6496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTCTCACAAACGTACACA	NA	NA	NA	NA	NA	NA	NA	NA	112616680	112631179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112
ENSMUSG00000021756.13_112616732_112631240_1	chr13	+	901	7	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	5135	9739	5135	-6435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTCGCGTCTCTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	112616731	112631240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112
ENSMUSG00000021756.13_112617958_112633920_1	chr13	+	994	7	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	6361	7059	6361	-3755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTCCACCCTTGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	112617957	112633920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631339_112633832
ENSMUSG00000021756.13_112624255_112634277_1	chr13	+	883	7	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	12658	6702	12658	-3398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGGACAAAGAAAGTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	112624254	112634277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631339_112633832_112633921_112634255
ENSMUSG00000021756.13_112624300_112634337_1	chr13	+	898	7	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	12703	6642	12703	-3338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACCAGAATGGCTTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	112624299	112634337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631339_112633832_112633921_112634255
ENSMUSG00000021756.13_112624357_112634387_1	chr13	+	891	7	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	12760	6592	12760	-3288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAAGGAGATGGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	112624356	112634387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631339_112633832_112633921_112634255
ENSMUSG00000021756.13_112625036_112635423_1	chr13	+	1002	7	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	13439	5556	13439	-2252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAATCAGGCAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	112625035	112635423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112625193_112627016_112627177_112630122_112630206_112631112_112631339_112633832_112633921_112634255_112634403_112635282
ENSMUSG00000021756.13_112627014_112637743_1	chr13	+	945	7	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	15417	3236	15417	68	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTGCACCTTCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	112627013	112637743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112627177_112630122_112630206_112631112_112631339_112633832_112633921_112634255_112634403_112635282_112635424_112637646
ENSMUSG00000021756.13_112627123_112639374_1	chr13	+	886	8	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	15526	1605	15526	-919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCAGTGGTCACCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	112627122	112639374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112627177_112630122_112630206_112631112_112631339_112633832_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324
ENSMUSG00000021756.13_112630123_112640293_1	chr13	+	919	8	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	18526	686	18526	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGTTGTGGAAATAGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	112630122	112640293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112630206_112631112_112631339_112633832_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ENSMUSG00000021756.13_112631265_112640497_1	chr13	+	888	7	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	19668	482	19668	204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTGGTGCACAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	112631264	112640497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112631339_112633832_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ENSMUSG00000021756.13_112634296_112640718_1	chr13	+	907	5	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	22699	261	22699	-261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACCAGGTTTTGTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	112634295	112640718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ENSMUSG00000021756.13_112635341_112640874_1	chr13	+	898	4	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	23744	105	23744	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGAGATTTGAATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	112635340	112640874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112635424_112637646_112637744_112639324_112639407_112640238
ENSMUSG00000021756.13_112635397_112640979_1	chr13	+	947	4	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	23800	0	23800	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTGGCTCCTGAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	112635396	112640979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112635424_112637646_112637744_112639324_112639407_112640238
ENSMUSG00000021759.15_112937564_112971430_1	chr13	+	275	2	ISM	ENSMUSG00000021759.15	ENSMUST00000016144.12	1598	6	238	32998	167	-32746	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCATTTCAGAGGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	112937563	112971430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112937801_112971392
ENSMUSG00000021759.15_112937608_112971488_1	chr13	+	289	2	ISM	ENSMUSG00000021759.15	ENSMUST00000016144.12	1598	6	282	32940	211	-32688	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTACCATCCCGTCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	112937607	112971488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112937801_112971392
ENSMUSG00000021759.15_112937729_112993334_1	chr13	+	282	3	ISM	ENSMUSG00000021759.15	ENSMUST00000016144.12	1598	6	403	11094	332	-10842	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCGGCAATCCCTACATA	NA	NA	NA	NA	NA	NA	NA	NA	112937728	112993334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112937801_112971392_112971548_112993279
ENSMUSG00000021759.15_112971479_112993471_1	chr13	+	261	2	ISM	ENSMUSG00000021759.15	ENSMUST00000016144.12	1598	6	34153	10957	34082	-10705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCCAGACTGGTCAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	112971478	112993471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112971548_112993279
ENSMUSG00000021760.6_113179293_113182041_1	chr13	-	617	2	ISM	ENSMUSG00000021760.6	ENSMUST00000022282.6	1042	3	903	0	886	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGTGCATTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	113182041	113179292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_113179834_113181965
ENSMUSG00000021760.6_113179293_113182111_1	chr13	-	686	2	NNC	ENSMUSG00000021760.6	novel	1042	3	NA	NA	816	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGTGCATTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	113182111	113179292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_113179834_113181966
ENSMUSG00000021760.6_113179293_113182111_2	chr13	-	687	2	ISM	ENSMUSG00000021760.6	ENSMUST00000022282.6	1042	3	833	0	816	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGTGCATTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	113182111	113179292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_113179834_113181965
ENSMUSG00000021760.6_113179597_113182927_1	chr13	-	721	3	FSM	ENSMUSG00000021760.6	ENSMUST00000022282.6	1042	3	17	304	0	-304	multi-exon	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGGCCATCTTACTATA	NA	NA	NA	NA	NA	NA	NA	NA	113182927	113179596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_113179834_113181965_113182228_113182705
ENSMUSG00000021760.6_113179597_113182927_2	chr13	-	459	2	FSM	ENSMUSG00000021760.6	ENSMUST00000231962.2	769	2	0	310	0	-304	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGGCCATCTTACTATA	NA	NA	NA	NA	NA	NA	NA	NA	113182927	113179596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_113179834_113182705
ENSMUSG00000021764.9_114425031_114444426_1	chr13	-	446	2	ISM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	80368	700	80368	-700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGTGGTTTCTGGTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	114444426	114425030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_114425403_114444352
ENSMUSG00000021764.9_114425332_114524585_1	chr13	-	488	5	FSM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	209	1001	209	-1001	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAACAAAAGAACAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	114524585	114425331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983_114488063_114524494
ENSMUSG00000021765.10_114589641_114595485_1	chr13	-	1713	6	FSM	ENSMUSG00000021765.10	ENSMUST00000231252.2	1113	6	-363	-237	0	-135	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATTTATACATAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	114595485	114589640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_114590042_114590815_114591044_114591656_114591882_114592219_114592439_114592898_114593091_114595037
ENSMUSG00000021767.20_21550953_21719400_1	chr14	+	4194	17	FSM	ENSMUSG00000021767.20	ENST00000372714.6	5910	17	34	1682	32	-1541	multi-exon	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGCTGAGACTCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	21550952	21719400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_21551147_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUSG00000021767.20_21550953_21719440_1	chr14	+	4234	17	FSM	ENSMUSG00000021767.20	ENST00000372714.6	5910	17	34	1642	32	-1501	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATACACACACAGACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	21550952	21719440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_21551147_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUSG00000021767.20_21551099_21719493_1	chr14	+	4141	17	FSM	ENSMUSG00000021767.20	ENST00000372714.6	5910	17	180	1589	178	-1448	multi-exon	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTCAGACCACAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	21551098	21719493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_21551147_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUSG00000021767.20_21566692_21719604_1	chr14	+	4206	16	ISM	ENSMUSG00000021767.20	ENST00000372714.6	5910	17	15773	1478	-127	-1337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCCGATCAGACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	21566691	21719604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUSG00000021767.20_21566819_21719656_1	chr14	+	4131	16	ISM	ENSMUSG00000021767.20	ENST00000372714.6	5910	17	15900	1426	0	-1285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCCAATGATGGACGTCC	NA	NA	NA	NA	NA	NA	NA	NA	21566818	21719656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUSG00000021767.20_21566943_21719843_1	chr14	+	4194	16	ISM	ENSMUSG00000021767.20	ENST00000372714.6	5910	17	16024	1239	0	-1098	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACCTCTAGCAATCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	21566942	21719843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUSG00000021767.20_21567383_21720219_1	chr14	+	4130	16	ISM	ENSMUSG00000021767.20	ENST00000372714.6	5910	17	16464	863	440	-722	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCATTCCGCTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	21567382	21720219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUSG00000021767.20_21567447_21720285_1	chr14	+	4132	16	ISM	ENSMUSG00000021767.20	ENST00000372714.6	5910	17	16528	797	504	-656	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCTTGTTCAGCTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	21567446	21720285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUSG00000021767.20_21659845_21720440_1	chr14	+	4144	15	ISM	ENSMUSG00000021767.20	ENST00000372714.6	5910	17	108926	642	92902	-501	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCACAGCCAAAGACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	21659844	21720440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUSG00000021767.20_21668988_21720557_1	chr14	+	4146	14	ISM	ENSMUSG00000021767.20	ENST00000372714.6	5910	17	118069	525	102045	-384	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGACTGTAGCCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	21668987	21720557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUSG00000021767.20_21669037_21720611_1	chr14	+	4151	14	ISM	ENSMUSG00000021767.20	ENST00000372714.6	5910	17	118118	471	102094	-330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACATGAGTGTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	21669036	21720611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUSG00000021767.20_21669348_21720730_1	chr14	+	4170	13	ISM	ENSMUSG00000021767.20	ENST00000372714.6	5910	17	118429	352	102405	-211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTACCACAGCAACCACG	NA	NA	NA	NA	NA	NA	NA	NA	21669347	21720730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUSG00000021767.20_21674901_21720941_1	chr14	+	4228	11	ISM	ENSMUSG00000021767.20	ENST00000372714.6	5910	17	123982	141	107958	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCTGGCAGCCCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	21674900	21720941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUSG00000021767.20_21678879_21721082_1	chr14	+	4193	9	ISM	ENSMUSG00000021767.20	ENSMUST00000238837.2	6165	16	111936	-141	111936	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGTATGCAGCAGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	21678878	21721082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUSG00000021768.16_21793580_21796553_1	chr14	-	389	3	ISM	ENSMUSG00000021768.16	ENSMUST00000075040.9	1745	8	2137	10117	2137	-9863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCAGGCGGCTAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	21796553	21793579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_21793598_21794815_21795011_21796377
ENSMUSG00000021768.16_21796453_21798568_1	chr14	-	406	3	ISM	ENSMUSG00000021768.16	ENSMUST00000075040.9	1745	8	122	12990	122	-12736	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCGTGGCTTCCTCCGAC	NA	NA	NA	NA	NA	NA	NA	NA	21798568	21796452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_21796586_21797488_21797707_21798513
ENSMUSG00000021770.12_21800616_21842547_1	chr14	+	1116	5	ISM	ENSMUSG00000021770.12	ENSMUST00000022292.10	1574	6	17	823	17	-823	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACACTTGTGGAGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	21800615	21842547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21800849_21825030_21825624_21830153_21830250_21833746_21833865_21842471
ENSMUSG00000021770.12_21800757_21842598_1	chr14	+	1026	5	ISM	ENSMUSG00000021770.12	ENSMUST00000022292.10	1574	6	158	772	158	-772	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAATTTCTTTGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	21800756	21842598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21800849_21825030_21825624_21830153_21830250_21833746_21833865_21842471
ENSMUSG00000021770.12_21825294_21843370_1	chr14	+	1061	5	ISM	ENSMUSG00000021770.12	ENSMUST00000022292.10	1574	6	24695	0	23674	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTCCCAGGCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	21825293	21843370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
ENSMUSG00000021771.15_21881337_21894007_1	chr14	+	1220	9	ISM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	0	1940	0	-1298	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATCTTTGATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	21881336	21894007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949
ENSMUSG00000021771.15_21881634_21895430_1	chr14	+	1140	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	297	517	0	125	multi-exon	FALSE	canonical	NA	NA	NA	NA	1761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTATTTTAAATATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	21881633	21895430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ENSMUSG00000021771.15_21881916_21895587_1	chr14	+	1198	9	ISM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	579	360	282	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	21881915	21895587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ENSMUSG00000021771.15_21882401_21895587_1	chr14	+	1220	9	NNC	ENSMUSG00000021771.15	novel	1256	9	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	21882400	21895587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_21882491_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893955_21894008_21895213
ENSMUSG00000021771.15_21882401_21895587_2	chr14	+	1226	9	FSM	ENSMUSG00000021771.15	ENST00000313132.8	1256	9	30	0	30	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	21882400	21895587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_21882491_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ENSMUSG00000021771.15_21887899_21895737_1	chr14	+	1080	6	ISM	ENSMUSG00000021771.15	ENST00000313132.8	1256	9	5528	-150	5384	150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTATGAATAAAACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	21887898	21895737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ENSMUSG00000021771.15_21888057_21895947_1	chr14	+	1226	5	ISM	ENSMUSG00000021771.15	ENST00000313132.8	1256	9	5686	-360	5542	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTGCAGTTTCTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	21888056	21895947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ENSMUSG00000021771.15_21888458_21895947_1	chr14	+	1172	4	ISM	ENSMUSG00000021771.15	ENST00000313132.8	1256	9	6087	-360	5943	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTGCAGTTTCTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	21888457	21895947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21888687_21890486_21890638_21893949_21894008_21895213
ENSMUSG00000021773.12_21895923_21898755_1	chr14	-	2134	6	FSM	ENSMUSG00000021773.12	ENSMUST00000177527.2	714	6	0	-1420	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAATCTCAAAGACCTCG	NA	NA	NA	NA	NA	NA	NA	NA	21898755	21895922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608
ENSMUSG00000021773.12_21896078_21898962_1	chr14	-	2076	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	83	155	83	-155	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCGTGGCTCAGAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	21898962	21896077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
ENSMUSG00000021773.12_21896133_21898962_1	chr14	-	2021	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	83	210	83	-210	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTTTCTCCTCTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	21898962	21896132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
ENSMUSG00000021773.12_21896157_21899045_1	chr14	-	2080	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	0	234	0	-234	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCTGTCAATAGAAGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	21899045	21896156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
ENSMUSG00000021774.14_4137837_4186521_1	chr14	+	955	6	FSM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	0	453	0	-453	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAACTGGTAATAGCGAC	NA	NA	NA	NA	NA	NA	NA	NA	4137836	4186521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_4138010_4138561_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
ENSMUSG00000021774.14_4137952_4186607_1	chr14	+	926	6	FSM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	115	367	115	-367	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCCATTGATCAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	4137951	4186607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_4138010_4138561_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
ENSMUSG00000021774.14_4138662_4186758_1	chr14	+	919	5	ISM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	825	216	825	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAAAATGGACACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	4138661	4186758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
ENSMUSG00000021774.14_4184474_4186974_1	chr14	+	953	3	ISM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	46637	0	46637	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGCTGTGTTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	4184473	4186974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_4184561_4185274_4185423_4186256
ENSMUSG00000021774.14_4184542_4186974_1	chr14	+	885	3	ISM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	46705	0	46705	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGCTGTGTTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	4184541	4186974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_4184561_4185274_4185423_4186256
ENSMUSG00000021794.17_34032684_34067222_1	chr14	+	3384	13	NNC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGTTCTCTATGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	34032683	34067222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056243_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ENSMUSG00000021794.17_34032684_34067222_2	chr14	+	3378	13	NNC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGTTCTCTATGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	34032683	34067222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061895_34061976_34064075_34064139_34065560
ENSMUSG00000021794.17_34057329_34065595_1	chr14	+	691	7	NNC	ENSMUSG00000021794.17	novel	2896	13	NA	NA	24474	-1221	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGACCTGAGAACAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	34057328	34065595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064229_34065560
ENSMUSG00000021794.17_34057329_34065652_1	chr14	+	748	7	NNC	ENSMUSG00000021794.17	novel	2896	13	NA	NA	24474	-1164	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAAGCTGGTGTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	34057328	34065652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064229_34065560
ENSMUSG00000021794.17_34064177_34066235_1	chr14	+	727	2	NNC	ENSMUSG00000021794.17	novel	2896	13	NA	NA	31322	-581	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACCTTTACTCAAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	34064176	34066235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_34064229_34065560
ENSMUSG00000021798.15_34283568_34299078_1	chr14	-	818	5	ISM	ENSMUSG00000021798.15	ENST00000372056.8	1368	8	11348	6	11348	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTACTTCCTACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	34299078	34283567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_34283839_34288813_34288851_34289354_34289525_34293674_34293879_34298942
ENSMUSG00000021798.15_34283595_34299117_1	chr14	-	811	4	NNC	ENSMUSG00000021798.15	novel	1368	8	NA	NA	11309	-33	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCACCCCAGAGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	34299117	34283594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_34283839_34289336_34289525_34293674_34293879_34298942
ENSMUSG00000021798.15_34283814_34300613_1	chr14	-	857	6	ISM	ENSMUSG00000021798.15	ENST00000372056.8	1368	8	9813	252	9813	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCACGTTTTGCCAAATT	NA	NA	NA	NA	NA	NA	NA	NA	34300613	34283813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_34283839_34288813_34288851_34289354_34289525_34293674_34293879_34298942_34299302_34300551
ENSMUSG00000021798.15_34288813_34301153_1	chr14	-	868	6	ISM	ENSMUSG00000021798.15	ENST00000372056.8	1368	8	9273	5251	9273	-5251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGCCTAGTCTTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	34301153	34288812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_34288851_34289354_34289525_34293674_34293879_34298942_34299302_34300551_34300628_34301132
ENSMUSG00000021798.15_34289416_34301219_1	chr14	-	835	5	ISM	ENSMUSG00000021798.15	ENST00000372056.8	1368	8	9207	5854	9207	-5854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCAACCTGCAGTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	34301219	34289415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_34289525_34293674_34293879_34298942_34299302_34300551_34300628_34301132
ENSMUSG00000021798.15_34289509_34310438_1	chr14	-	912	6	ISM	ENSMUSG00000021798.15	ENST00000372056.8	1368	8	-12	5947	0	-5947	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGCGGTGGACAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	34310438	34289508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_34289525_34293674_34293879_34298942_34299302_34300551_34300628_34301132_34301285_34310333
ENSMUSG00000021798.15_34293674_34310438_1	chr14	-	897	5	ISM	ENSMUSG00000021798.15	ENST00000372056.8	1368	8	-12	10112	0	-10112	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCGCCTTCCCACTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	34310438	34293673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_34293879_34298942_34299302_34300551_34300628_34301132_34301285_34310333
ENSMUSG00000021803.11_36802414_36809434_1	chr14	-	1183	7	ISM	ENSMUSG00000021803.11	ENST00000332904.7	2136	16	10754	0	10754	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATGCTGTGGTCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	36809434	36802413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36802677_36803289_36803519_36804100_36804169_36804720_36804886_36806880_36807034_36807468_36807673_36809333
ENSMUSG00000021803.11_36802618_36811365_1	chr14	-	1100	9	ISM	ENSMUSG00000021803.11	ENSMUST00000022337.11	4332	17	8939	2804	8823	-204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCAGTCAACGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	36811365	36802617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36802677_36803289_36803519_36804100_36804169_36804720_36804886_36806880_36807034_36807468_36807673_36809333_36809435_36810894_36810974_36811323
ENSMUSG00000021803.11_36803475_36813927_1	chr14	-	1103	10	ISM	ENSMUSG00000021803.11	ENSMUST00000022337.11	4332	17	6377	3661	6261	-1061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCAGCCTGGATGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	36813927	36803474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36803519_36804100_36804169_36804720_36804886_36806880_36807034_36807468_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899
ENSMUSG00000021803.11_36804720_36817062_1	chr14	-	1192	10	ISM	ENSMUSG00000021803.11	ENSMUST00000022337.11	4332	17	3242	4906	3126	-2306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTGGGGAGTGGCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	36817062	36804719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36804886_36806880_36807034_36807468_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011
ENSMUSG00000021803.11_36804851_36818192_1	chr14	-	1100	11	ISM	ENSMUSG00000021803.11	ENSMUST00000022337.11	4332	17	2112	5037	1996	-2437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTCCACAGCAGACATTG	NA	NA	NA	NA	NA	NA	NA	NA	36818192	36804850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36804886_36806880_36807034_36807468_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011_36817063_36818153
ENSMUSG00000021803.11_36806881_36818299_1	chr14	-	1172	10	ISM	ENSMUSG00000021803.11	ENSMUST00000022337.11	4332	17	2005	7067	1889	-4467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTATGTTTTGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	36818299	36806880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36807034_36807468_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011_36817063_36818153
ENSMUSG00000021803.11_36806996_36819254_1	chr14	-	1093	11	ISM	ENSMUSG00000021803.11	ENSMUST00000022337.11	4332	17	1050	7182	934	-4582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGCATCTTCCGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	36819254	36806995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36807034_36807468_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011_36817063_36818153_36818300_36819218
ENSMUSG00000021803.11_36807516_36820073_1	chr14	-	1096	11	ISM	ENSMUSG00000021803.11	ENSMUST00000022337.11	4332	17	231	7702	115	-5102	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGATTCTCCGTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	36820073	36807515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011_36817063_36818153_36818300_36819218_36819315_36820045
ENSMUSG00000021803.11_36807621_36820179_1	chr14	-	1097	11	ISM	ENSMUSG00000021803.11	ENSMUST00000022337.11	4332	17	125	7807	9	-5207	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCATCAGGATCGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	36820179	36807620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011_36817063_36818153_36818300_36819218_36819315_36820045
ENSMUSG00000021806.5_19801352_19855941_1	chr14	+	3719	17	ISM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	19	5914	19	-5914	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTTCCGTAGAACAATGT	NA	NA	NA	NA	NA	NA	NA	NA	19801351	19855941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910
ENSMUSG00000021806.5_19801352_19856006_1	chr14	+	3784	17	ISM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	19	5849	19	-5849	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTCCGAGCGGAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	19801351	19856006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910
ENSMUSG00000021806.5_19801562_19858049_1	chr14	+	3705	18	ISM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	229	3806	229	-3806	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGATGGCGAAAACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	19801561	19858049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994
ENSMUSG00000021806.5_19802350_19860065_1	chr14	+	3713	18	ISM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	1017	1790	1017	-1790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACTACCCGATGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	19802349	19860065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047
ENSMUSG00000021806.5_19802547_19861107_1	chr14	+	3708	19	ISM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	1214	748	1214	-748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGTCTACCCGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	19802546	19861107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021
ENSMUSG00000021806.5_19813795_19861345_1	chr14	+	3695	19	ISM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	12462	510	12462	-510	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAATTGGCCATTATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	19813794	19861345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ENSMUSG00000021806.5_19813870_19861390_1	chr14	+	3665	19	ISM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	12537	465	12537	-465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCAGTGAGACTCAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	19813869	19861390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ENSMUSG00000021806.5_19818305_19861606_1	chr14	+	3757	18	ISM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	16972	249	16972	-249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTGGCCAAGAAAAGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	19818304	19861606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ENSMUSG00000021806.5_19818612_19861855_1	chr14	+	3699	18	ISM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	17279	0	17279	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	19818611	19861855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ENSMUSG00000021807.7_19861419_19873892_2	chr14	-	1553	8	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATATACTTGAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	19873892	19861418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872750_19873736
ENSMUSG00000021807.7_19861419_19873892_3	chr14	-	1552	8	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATATACTTGAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	19873892	19861418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867216_19869974_19870065_19872633_19872759_19873736
ENSMUSG00000021807.7_19861419_19873892_4	chr14	-	1554	8	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATATACTTGAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	19873892	19861418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867208_19869974_19870075_19872633_19872759_19873736
ENSMUSG00000021809.11_20344835_20359865_1	chr14	+	627	6	ISM	ENSMUSG00000021809.11	ENSMUST00000224311.2	1574	9	31	6965	31	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1075	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCCGTGGGGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	20344834	20359865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20344861_20350654_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359739
ENSMUSG00000021809.11_20344835_20359865_2	chr14	+	621	6	NNC	ENSMUSG00000021809.11	novel	2494	9	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCCGTGGGGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	20344834	20359865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_20344861_20350654_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359745
ENSMUSG00000021809.11_20354035_20361564_1	chr14	+	632	6	ISM	ENSMUSG00000021809.11	ENST00000357321.9	940	8	9243	128	3374	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAAGTTGCGGAAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	20354034	20361564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20354161_20356299_20356435_20357760_20357868_20359739_20359866_20360689_20360802_20361538
ENSMUSG00000021809.11_20354093_20361608_1	chr14	+	618	6	ISM	ENSMUSG00000021809.11	ENST00000357321.9	940	8	9301	84	3432	-84	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTCTGCGTCCCAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	20354092	20361608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20354161_20356299_20356435_20357760_20357868_20359739_20359866_20360689_20360802_20361538
ENSMUSG00000021809.11_20354112_20361693_1	chr14	+	684	6	ISM	ENSMUSG00000021809.11	ENST00000357321.9	940	8	9320	-1	3451	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTCTTAACTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	20354111	20361693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20354161_20356299_20356435_20357760_20357868_20359739_20359866_20360689_20360802_20361538
ENSMUSG00000021809.11_20356362_20361592_1	chr14	+	360	4	ISM	ENSMUSG00000021809.11	ENST00000372997.3	749	6	5701	100	5701	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTGGAAAACATACAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	20356361	20361592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20356435_20357760_20357868_20359739_20359866_20361538
ENSMUSG00000021809.11_20356414_20361643_1	chr14	+	359	4	ISM	ENSMUSG00000021809.11	ENST00000372997.3	749	6	5753	49	5753	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACTCATGATCGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	20356413	20361643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20356435_20357760_20357868_20359739_20359866_20361538
ENSMUSG00000021810.4_20370679_20374526_1	chr14	-	427	2	ISM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	23663	759	22318	117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGGTCTAGAAAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	20374526	20370678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20371020_20374440
ENSMUSG00000021810.4_20370796_20393443_1	chr14	-	1766	12	NNC	ENSMUSG00000021810.4	novel	1932	13	NA	NA	3401	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGGACTAGCCTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	20393443	20370795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_20371014_20374442_20374650_20377291_20377360_20378670_20378858_20378950_20379109_20380017_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323
ENSMUSG00000021810.4_20370796_20396722_1	chr14	-	1810	13	FSM	ENSMUSG00000021810.4	ENST00000430082.6	1932	13	122	0	122	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGGACTAGCCTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	20396722	20370795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_20371014_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379109_20380017_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678
ENSMUSG00000021810.4_20370871_20378701_1	chr14	-	457	4	ISM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	19488	951	18143	-75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCTTCCAATCTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	20378701	20370870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670
ENSMUSG00000021810.4_20370942_20380110_1	chr14	-	732	6	ISM	ENSMUSG00000021810.4	ENST00000454759.6	1748	12	16734	146	16734	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTGGATGTAGACCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	20380110	20370941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20371014_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021
ENSMUSG00000021810.4_20370942_20396722_1	chr14	-	1664	13	FSM	ENSMUSG00000021810.4	ENST00000430082.6	1932	13	122	146	122	-146	multi-exon	FALSE	canonical	NA	NA	NA	NA	1316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTGGATGTAGACCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	20396722	20370941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_20371014_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379109_20380017_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678
ENSMUSG00000021810.4_20370942_20396832_1	chr14	-	1774	13	FSM	ENSMUSG00000021810.4	ENST00000430082.6	1932	13	12	146	12	-146	multi-exon	FALSE	canonical	NA	NA	NA	NA	1447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTGGATGTAGACCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	20396832	20370941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_20371014_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379109_20380017_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678
ENSMUSG00000021810.4_20374479_20383490_1	chr14	-	713	6	ISM	ENSMUSG00000021810.4	ENST00000454759.6	1748	12	13354	3683	13354	-3683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCATGGGCAGAAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	20383490	20374478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396
ENSMUSG00000021810.4_20374613_20387004_1	chr14	-	669	7	ISM	ENSMUSG00000021810.4	ENST00000454759.6	1748	12	9840	3817	9840	-3817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGAGGAGGACGTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	20387004	20374612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386949
ENSMUSG00000021810.4_20378729_20388213_1	chr14	-	661	6	ISM	ENSMUSG00000021810.4	ENST00000454759.6	1748	12	8631	7933	8631	-7933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCATGAAGGCCTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	20388213	20378728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386949_20387143_20388196
ENSMUSG00000021810.4_20378784_20388264_1	chr14	-	657	6	ISM	ENSMUSG00000021810.4	ENST00000454759.6	1748	12	8580	7988	8580	-7988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCCGGTCCCCAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	20388264	20378783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386949_20387143_20388196
ENSMUSG00000021810.4_20378841_20388327_1	chr14	-	663	6	ISM	ENSMUSG00000021810.4	ENST00000454759.6	1748	12	8517	8045	8517	-8045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCACCAGACCAGTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	20388327	20378840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386949_20387143_20388196
ENSMUSG00000021810.4_20379025_20388513_1	chr14	-	657	6	ISM	ENSMUSG00000021810.4	ENST00000454759.6	1748	12	8331	8229	8331	-8229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCGTGTTACAGACACAGC	NA	NA	NA	NA	NA	NA	NA	NA	20388513	20379024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20379058_20380021_20380108_20383396_20383526_20386949_20387143_20388196_20388376_20388476
ENSMUSG00000021810.4_20383470_20396706_1	chr14	-	662	6	ISM	ENSMUSG00000021810.4	ENST00000454759.6	1748	12	138	12674	138	-12674	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCTCTTGTGACTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	20396706	20383469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20383526_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678
ENSMUSG00000021810.4_20393326_20398004_1	chr14	-	470	3	ISM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	185	23406	185	-22530	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTATTGTCATTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	20398004	20393325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20393442_20396678_20396890_20397861
ENSMUSG00000021811.8_20438200_20438470_1	chr14	-	183	2	ISM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	508	3494	508	-3494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGACTTCAAGGGCGACA	NA	NA	NA	NA	NA	NA	NA	NA	20438470	20438199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20438280_20438367
ENSMUSG00000021811.8_20438257_20438516_1	chr14	-	172	2	ISM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	462	3551	462	-3551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTGAAAAGACATACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	20438516	20438256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20438280_20438367
ENSMUSG00000021811.8_20438374_20438715_1	chr14	-	179	2	ISM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	263	3668	263	-3668	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGTAAAGAGCTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	20438715	20438373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20438509_20438671
ENSMUSG00000021811.8_20438432_20438762_1	chr14	-	168	2	ISM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	216	3726	216	-3726	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTGCTGGCCTCAACC	NA	NA	NA	NA	NA	NA	NA	NA	20438762	20438431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20438509_20438671
ENSMUSG00000021814.18_20505553_20510284_1	chr14	-	1288	3	ISM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	19695	208	19695	-208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGAGACTGGGAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	20510284	20505552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20506670_20508637_20508751_20510226
ENSMUSG00000021814.18_20505895_20508664_1	chr14	-	802	2	ISM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	21315	550	21315	-550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCCTTCTAAGCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	20508664	20505894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20506670_20508637
ENSMUSG00000021814.18_20506116_20510466_1	chr14	-	829	4	ISM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	19513	771	19513	-771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAAGTTTCCTGGTACAA	NA	NA	NA	NA	NA	NA	NA	NA	20510466	20506115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380
ENSMUSG00000021814.18_20506194_20510507_1	chr14	-	792	4	ISM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	19472	849	19472	-849	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAAACACGCTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	20510507	20506193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380
ENSMUSG00000021814.18_20506302_20512706_1	chr14	-	812	5	ISM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	17273	957	17273	-957	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCTCACTGCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	20512706	20506301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622
ENSMUSG00000021814.18_20506365_20519535_1	chr14	-	1293	10	ISM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	10444	1020	10444	-1020	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGTATCCAATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	20519535	20506364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455
ENSMUSG00000021814.18_20506488_20513088_1	chr14	-	827	6	ISM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	16891	1143	16891	-1143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCTGCATGCAGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	20513088	20506487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974
ENSMUSG00000021814.18_20506488_20521504_1	chr14	-	1261	11	ISM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	8475	1143	8475	-1143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCTGCATGCAGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	20521504	20506487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435
ENSMUSG00000021814.18_20506597_20514771_1	chr14	-	813	7	ISM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	15208	1252	15208	-1252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGAGTGGAGATTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	20514771	20506596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676
ENSMUSG00000021814.18_20506597_20521640_1	chr14	-	1288	11	ISM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	8339	1252	8339	-1252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGAGTGGAGATTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	20521640	20506596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435
ENSMUSG00000021814.18_20508638_20515014_1	chr14	-	843	7	ISM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	14965	3293	14965	-3293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGCAAGGGGACACTTT	NA	NA	NA	NA	NA	NA	NA	NA	20515014	20508637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911
ENSMUSG00000021814.18_20512622_20521640_1	chr14	-	856	7	ISM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	8339	7277	8339	-7277	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATAGTATTAATGACT	NA	NA	NA	NA	NA	NA	NA	NA	20521640	20512621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435
ENSMUSG00000021814.18_20512622_20523397_1	chr14	-	911	8	ISM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	6582	7277	6582	-7277	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATAGTATTAATGACT	NA	NA	NA	NA	NA	NA	NA	NA	20523397	20512621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342
ENSMUSG00000021814.18_20512745_20529987_1	chr14	-	813	9	ISM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	214	7417	-8	-7400	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATCAAGAAATTCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	20529987	20512744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ENSMUSG00000021814.18_20514676_20530189_1	chr14	-	853	7	ISM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	12	9348	0	-9331	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTTTCCCATTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	20530189	20514675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ENSMUSG00000021815.5_20533173_20537123_1	chr14	-	954	5	ISM	ENSMUSG00000021815.5	ENST00000299432.7	1436	7	9624	66	9624	-66	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTACTACATCATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	20537123	20533172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20533310_20533617_20533712_20534702_20535270_20536214_20536340_20537092
ENSMUSG00000021815.5_20533277_20537235_1	chr14	-	962	5	ISM	ENSMUSG00000021815.5	ENST00000299432.7	1436	7	9512	170	9512	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAACTTGGATACACACA	NA	NA	NA	NA	NA	NA	NA	NA	20537235	20533276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20533310_20533617_20533712_20534702_20535270_20536214_20536340_20537092
ENSMUSG00000021815.5_20533665_20537571_1	chr14	-	955	5	ISM	ENSMUSG00000021815.5	ENST00000299432.7	1436	7	9176	558	9176	-558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTACTTCGTGACTATGA	NA	NA	NA	NA	NA	NA	NA	NA	20537571	20533664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20533712_20534702_20535270_20536214_20536340_20537092_20537249_20537511
ENSMUSG00000021815.5_20534865_20546728_1	chr14	-	954	5	ISM	ENSMUSG00000021815.5	ENSMUST00000022353.5	1826	7	241	1930	19	-1758	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGTGGCTACTGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	20546728	20534864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20535270_20536214_20536340_20537092_20537249_20537511_20537754_20546702
ENSMUSG00000021820.19_20784951_20789470_1	chr14	-	2386	4	ISM	ENSMUSG00000021820.19	ENSMUST00000080440.14	3604	20	54628	0	54564	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCCATTGTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	20789470	20784950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394
ENSMUSG00000021820.19_20785432_20814320_1	chr14	-	2346	11	ISM	ENSMUSG00000021820.19	ENSMUST00000080440.14	3604	20	29778	481	29714	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAACTACAGAGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	20814320	20785431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20795859_20795929_20805726_20805771_20810211_20810255_20810464_20810549_20814213
ENSMUSG00000021820.19_20785683_20815999_1	chr14	-	2310	14	ISM	ENSMUSG00000021820.19	ENSMUST00000080440.14	3604	20	28099	732	28035	-732	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCCTGCATGTACCCACA	NA	NA	NA	NA	NA	NA	NA	NA	20815999	20785682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20795859_20795929_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979
ENSMUSG00000021820.19_20785975_20787416_1	chr14	-	1036	2	ISM	ENSMUSG00000021820.19	ENSMUST00000226630.2	1937	22	56618	-720	56618	720	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCATGGTGGTGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	20787416	20785974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20786921_20787326
ENSMUSG00000021820.19_20786054_20842733_1	chr14	-	2423	19	ISM	ENSMUSG00000021820.19	ENSMUST00000080440.14	3604	20	1365	1103	1301	641	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAAGTCGTTGGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	20842733	20786053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20795859_20795929_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586
ENSMUSG00000021820.19_20786160_20844051_1	chr14	-	2348	20	FSM	ENSMUSG00000021820.19	ENSMUST00000080440.14	3604	20	47	1209	-17	535	multi-exon	FALSE	canonical	NA	NA	NA	NA	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAATGCACGTGGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	20844051	20786159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20795859_20795929_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUSG00000021820.19_20786304_20791463_1	chr14	-	1051	5	ISM	ENSMUSG00000021820.19	ENSMUST00000226630.2	1937	22	52571	-391	52571	391	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTCAGGACTGAAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	20791463	20786303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20791445
ENSMUSG00000021820.19_20786546_20795910_1	chr14	-	1050	8	ISM	ENSMUSG00000021820.19	ENSMUST00000226630.2	1937	22	48124	-149	48124	149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCCCATGGATTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	20795910	20786545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20791445_20791560_20792772_20792822_20794671_20794717_20795859
ENSMUSG00000021820.19_20786695_20810256_1	chr14	-	1104	12	ISM	ENSMUSG00000021820.19	ENST00000423381.6	3847	23	33867	1752	33778	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGTTTAAAAAAACGGAA	NA	NA	NA	NA	NA	NA	NA	NA	20810256	20786694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20791445_20791560_20792772_20792822_20794671_20794717_20795859_20795929_20797886_20797920_20805726_20805771_20807733_20807797_20810211
ENSMUSG00000021820.19_20786695_20844034_1	chr14	-	1785	20	NNC	ENSMUSG00000021820.19	novel	1817	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGTTTAAAAAAACGGAA	NA	NA	NA	NA	NA	NA	NA	NA	20844034	20786694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805726_20805771_20807733_20807797_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815984_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUSG00000021820.19_20786695_20844034_2	chr14	-	1789	20	NNC	ENSMUSG00000021820.19	novel	1817	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGTTTAAAAAAACGGAA	NA	NA	NA	NA	NA	NA	NA	NA	20844034	20786694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805726_20805771_20807734_20807797_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUSG00000021820.19_20786695_20844034_3	chr14	-	1787	20	NNC	ENSMUSG00000021820.19	novel	1817	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGTTTAAAAAAACGGAA	NA	NA	NA	NA	NA	NA	NA	NA	20844034	20786694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805726_20805771_20807733_20807790_20810207_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUSG00000021820.19_20786695_20844034_4	chr14	-	1790	20	FSM	ENSMUSG00000021820.19	ENST00000372765.5	1817	20	36	-9	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGTTTAAAAAAACGGAA	NA	NA	NA	NA	NA	NA	NA	NA	20844034	20786694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805726_20805771_20807733_20807797_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUSG00000021820.19_20786695_20844034_5	chr14	-	1784	20	NNC	ENSMUSG00000021820.19	novel	1817	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGTTTAAAAAAACGGAA	NA	NA	NA	NA	NA	NA	NA	NA	20844034	20786694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805726_20805771_20807733_20807797_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816077_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUSG00000021820.19_20786695_20844034_6	chr14	-	1784	20	NNC	ENSMUSG00000021820.19	novel	1817	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGTTTAAAAAAACGGAA	NA	NA	NA	NA	NA	NA	NA	NA	20844034	20786694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805732_20805771_20807733_20807797_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUSG00000021820.19_20786695_20844034_7	chr14	-	1788	20	NNC	ENSMUSG00000021820.19	novel	1817	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1037	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGTTTAAAAAAACGGAA	NA	NA	NA	NA	NA	NA	NA	NA	20844034	20786694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805726_20805771_20807733_20807797_20810211_20810255_20810464_20810549_20814215_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUSG00000021820.19_20786879_20814320_1	chr14	-	1109	14	ISM	ENSMUSG00000021820.19	ENST00000423381.6	3847	23	29803	1936	29714	-47	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGACTCTGGAGGGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	20814320	20786878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20791445_20791560_20792772_20792822_20794671_20794717_20795859_20795929_20797886_20797920_20805726_20805771_20807733_20807797_20810211_20810255_20810464_20810549_20814213
ENSMUSG00000021820.19_20786957_20788993_1	chr14	-	692	2	ISM	ENSMUSG00000021820.19	ENST00000441192.2	2328	22	55094	125	55041	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTCTGTCCCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	20788993	20786956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20787572_20788916
ENSMUSG00000021820.19_20787172_20791533_1	chr14	-	659	4	ISM	ENSMUSG00000021820.19	ENST00000441192.2	2328	22	52554	340	52501	-340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTCCAGATTTGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	20791533	20787171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20787572_20788916_20789012_20789394_20789471_20791445
ENSMUSG00000021820.19_20788980_20807800_1	chr14	-	346	7	ISM	ENSMUSG00000021820.19	ENST00000322635.7	3689	21	36348	4037	36234	-2148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGAAGCCCTTGGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	20807800	20788979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20797886_20797920_20805726_20805771_20807733
ENSMUSG00000021820.19_20788980_20816089_1	chr14	-	1064	15	ISM	ENSMUSG00000021820.19	ENST00000441192.2	2328	22	27998	2148	27945	-2148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGAAGCCCTTGGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	20816089	20788979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20789012_20789394_20789471_20791445_20791560_20792772_20792822_20794671_20794717_20795859_20795929_20797886_20797920_20805726_20805771_20807733_20807797_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979
ENSMUSG00000021820.19_20789396_20816296_1	chr14	-	1100	15	ISM	ENSMUSG00000021820.19	ENST00000441192.2	2328	22	27791	2564	27738	-2564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTGAGTAAAAACCCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	20816296	20789395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20789471_20791445_20791560_20792772_20792822_20794671_20794717_20795859_20795929_20797886_20797920_20805726_20805771_20807733_20807797_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220
ENSMUSG00000021820.19_20791498_20820197_1	chr14	-	1036	15	ISM	ENSMUSG00000021820.19	ENST00000441192.2	2328	22	23890	4666	23837	-4666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCCCCTCTGCAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	20820197	20791497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20791560_20792772_20792822_20794671_20794717_20795859_20795929_20797886_20797920_20805726_20805771_20807733_20807797_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131
ENSMUSG00000021820.19_20795855_20842733_1	chr14	-	1147	15	ISM	ENSMUSG00000021820.19	ENST00000441192.2	2328	22	1354	9023	1301	-9023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTACGGCTTCTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	20842733	20795854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20795929_20797886_20797920_20805726_20805771_20807733_20807797_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586
ENSMUSG00000021820.19_20807734_20844156_1	chr14	-	1132	13	ISM	ENSMUSG00000021820.19	ENST00000441192.2	2328	22	-69	20902	0	-20902	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTGGCATGAGTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	20844156	20807733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20807797_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUSG00000021823.11_20979649_21046008_1	chr14	+	910	8	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	183	37736	183	-37736	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCAAAATGCTAGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	20979648	21046008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912
ENSMUSG00000021823.11_21032655_21051306_1	chr14	+	878	7	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	53189	32438	53189	-32438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAACTCAAAGCAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	21032654	21051306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198
ENSMUSG00000021823.11_21033464_21053304_1	chr14	+	900	7	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	53998	30440	53998	-30440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGACCTCTAAACTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	21033463	21053304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162
ENSMUSG00000021823.11_21037114_21058988_1	chr14	+	893	7	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	57648	24756	57648	-24756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTATCGCCAAGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	21037113	21058988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928
ENSMUSG00000021823.11_21051268_21065092_1	chr14	+	895	6	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	71802	18652	71802	-18652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGTGAAGACAGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	21051267	21065092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978
ENSMUSG00000021823.11_21053185_21069456_1	chr14	+	933	6	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	73719	14288	73719	-14288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGTTCTGCAGAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	21053184	21069456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347
ENSMUSG00000021823.11_21070673_21081777_1	chr14	+	920	6	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	91207	1967	91207	-1967	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGACTCCCTGGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	21070672	21081777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ENSMUSG00000021823.11_21070802_21081881_1	chr14	+	895	6	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	91336	1863	91336	-1863	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTCAGGAATGGAAACATC	NA	NA	NA	NA	NA	NA	NA	NA	21070801	21081881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ENSMUSG00000021823.11_21074261_21082153_1	chr14	+	907	4	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	94795	1591	94795	-1591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTGTGCTTCCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	21074260	21082153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21074360_21079243_21079448_21079849_21079955_21081654
ENSMUSG00000021823.11_21079357_21082364_1	chr14	+	906	3	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	99891	1380	99891	-1380	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTTTACCATGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	21079356	21082364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21079448_21079849_21079955_21081654
ENSMUSG00000021823.11_21079861_21082506_1	chr14	+	946	2	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	100395	1238	100395	-1238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCCATCCTCCCAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	21079860	21082506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21079955_21081654
ENSMUSG00000021824.14_21084396_21087242_1	chr14	-	2438	2	ISM	ENSMUSG00000021824.14	ENSMUST00000022371.10	1770	9	15048	-1686	15021	1686	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAACTGCAGAGTCTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	21087242	21084395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_21086772_21087180
ENSMUSG00000021824.14_21084596_21088158_1	chr14	-	2434	3	ISM	ENSMUSG00000021824.14	ENSMUST00000022371.10	1770	9	14132	-1486	14105	1486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTCTCCTTTTTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	21088158	21084595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_21086772_21087180_21087326_21088045
ENSMUSG00000021824.14_21084737_21089232_1	chr14	-	2425	4	ISM	ENSMUSG00000021824.14	ENSMUST00000022371.10	1770	9	13058	-1345	13031	1345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATATTTACAACCATTC	NA	NA	NA	NA	NA	NA	NA	NA	21089232	21084736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195
ENSMUSG00000021824.14_21084947_21091050_1	chr14	-	2428	6	ISM	ENSMUSG00000021824.14	ENSMUST00000022371.10	1770	9	11240	-1135	11213	1135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTGACAGACCCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	21091050	21084946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020
ENSMUSG00000021824.14_21085185_21094851_1	chr14	-	2429	7	ISM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	7667	3675	7412	897	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAACATAAAATATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	21094851	21085184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720
ENSMUSG00000021824.14_21085329_21095662_1	chr14	-	2433	8	ISM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	6856	3819	6601	753	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGGCTCACTCCACGTT	NA	NA	NA	NA	NA	NA	NA	NA	21095662	21085328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555
ENSMUSG00000021824.14_21085405_21095729_1	chr14	-	2424	8	ISM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	6789	3895	6534	677	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGAGGAAGACAAAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	21095729	21085404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555
ENSMUSG00000021824.14_21085455_21095789_1	chr14	-	2434	8	ISM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	6729	3945	6474	627	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATTCTGCATCTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	21095789	21085454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555
ENSMUSG00000021824.14_21085689_21102393_1	chr14	-	2428	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	125	4179	-103	393	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAGTTGAATTTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	21102393	21085688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
ENSMUSG00000021824.14_21085763_21102518_1	chr14	-	2479	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	0	4253	0	319	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGAAACCCTAGTTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	21102518	21085762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
ENSMUSG00000021831.10_45523448_45525259_1	chr14	-	168	2	ISM	ENSMUSG00000021831.10	ENST00000395686.8	2224	14	30696	788	30696	-788	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGAAGGGCAGAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	45525259	45523447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45523546_45525189
ENSMUSG00000021832.9_45567302_45586130_1	chr14	+	1145	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	57	1032	57	-1032	multi-exon	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAAGCTGGACTACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	45567301	45586130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ENSMUSG00000021832.9_45569363_45586329_1	chr14	+	1136	11	ISM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	2118	833	2118	-833	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTTGGTGATGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	45569362	45586329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ENSMUSG00000021832.9_45569401_45586415_1	chr14	+	1184	11	ISM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	2156	747	2156	-747	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACATTCAAAATGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	45569400	45586415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ENSMUSG00000021832.9_45572403_45586492_1	chr14	+	1149	9	ISM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	5158	670	5158	-670	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGCAATAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	45572402	45586492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ENSMUSG00000021832.9_45574933_45586673_1	chr14	+	1246	8	ISM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	7688	489	7688	-489	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTATAGATCATAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	45574932	45586673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ENSMUSG00000021832.9_45578085_45586673_1	chr14	+	1158	7	ISM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	10840	489	10840	-489	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTATAGATCATAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	45578084	45586673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ENSMUSG00000021832.9_45580886_45586931_1	chr14	+	1138	4	ISM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	13641	231	13641	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGGATTCTATAAATATC	NA	NA	NA	NA	NA	NA	NA	NA	45580885	45586931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_45580979_45581103_45581185_45584200_45584273_45586039
ENSMUSG00000021832.9_45581124_45587043_1	chr14	+	1137	3	ISM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	13879	119	13879	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGCAATCAAAAGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	45581123	45587043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_45581185_45584200_45584273_45586039
ENSMUSG00000021832.9_45584195_45587162_1	chr14	+	1201	2	ISM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	16950	0	16950	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAATGATCCAGCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	45584194	45587162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_45584273_45586039
ENSMUSG00000021835.16_46621804_46623366_1	chr14	-	561	2	ISM	ENSMUSG00000021835.16	ENSMUST00000100676.3	1633	3	4641	640	4641	-640	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCAGGGCCAGCACGTC	NA	NA	NA	NA	NA	NA	NA	NA	46623366	46621803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_46622170_46623171
ENSMUSG00000021835.16_46621851_46623421_1	chr14	-	569	2	ISM	ENSMUSG00000021835.16	ENSMUST00000100676.3	1633	3	4586	687	4586	-687	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTATGGGCTGGCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	46623421	46621850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_46622170_46623171
ENSMUSG00000021835.16_46622022_46624643_1	chr14	-	559	3	ISM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	3483	1045	3364	-858	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTTCCACCGTATAAACA	NA	NA	NA	NA	NA	NA	NA	NA	46624643	46622021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_46622170_46623171_46623552_46624612
ENSMUSG00000021835.16_46622074_46624761_1	chr14	-	625	3	ISM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	3365	1097	3246	-910	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGCTCCGGCTCTTTCGG	NA	NA	NA	NA	NA	NA	NA	NA	46624761	46622073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_46622170_46623171_46623552_46624612
ENSMUSG00000021835.16_46622133_46627789_1	chr14	-	571	4	FSM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	337	1156	218	-969	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTCGTTTCCTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	46627789	46622132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_46622170_46623171_46623552_46624612_46624738_46627760
ENSMUSG00000021835.16_46623341_46627992_1	chr14	-	568	3	ISM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	134	2364	15	-2177	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCGTCCGCAGCCTAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	46627992	46623340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_46623552_46624612_46624738_46627760
ENSMUSG00000021840.18_47535723_47559879_1	chr14	+	3877	3	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	-3	-673	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGCTTAATAAACTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	47535722	47559879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_47535863_47547844_47548571_47556868
ENSMUSG00000021840.18_47548405_47560552_1	chr14	+	3850	2	ISM	ENSMUSG00000021840.18	ENSMUST00000164235.3	4531	3	2398	109	2398	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTTCTTTGTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	47548404	47560552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_47548571_47556868
ENSMUSG00000021840.18_47548514_47560552_1	chr14	+	3741	2	ISM	ENSMUSG00000021840.18	ENSMUST00000164235.3	4531	3	2507	109	2507	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTTCTTTGTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	47548513	47560552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_47548571_47556868
ENSMUSG00000021843.18_47952134_47973763_1	chr14	+	1146	12	FSM	ENSMUSG00000021843.18	ENST00000555573.5	1451	12	80	225	80	13	multi-exon	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAACTGTTTGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	47952133	47973763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ENSMUSG00000021843.18_47957651_47973877_1	chr14	+	1129	10	ISM	ENSMUSG00000021843.18	ENST00000555573.5	1451	12	5597	111	5597	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAAATTTAACATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	47957650	47973877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ENSMUSG00000021843.18_47961426_47974014_1	chr14	+	1175	9	ISM	ENSMUSG00000021843.18	ENST00000555573.5	1451	12	9372	-26	9372	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	47961425	47974014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ENSMUSG00000021848.17_48895136_48904965_1	chr14	-	1962	5	FSM	ENSMUSG00000021848.17	ENST00000672125.1	1859	5	-73	-30	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGGGTCTAGTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	48904965	48895135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_48896310_48896672_48896784_48898755_48898908_48899900_48900117_48904656
ENSMUSG00000021848.17_48895136_48904965_2	chr14	-	1956	5	NNC	ENSMUSG00000021848.17	novel	1859	5	NA	NA	5	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGGGTCTAGTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	48904965	48895135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_48896310_48896672_48896784_48898761_48898908_48899900_48900117_48904656
ENSMUSG00000021848.17_48895136_48904965_3	chr14	-	1957	5	NNC	ENSMUSG00000021848.17	novel	1859	5	NA	NA	5	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGGGTCTAGTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	48904965	48895135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_48896310_48896672_48896784_48898755_48898908_48899900_48900117_48904661
ENSMUSG00000021868.8_25694751_25700016_1	chr14	+	516	6	FSM	ENSMUSG00000021868.8	ENSMUST00000022419.7	1549	6	157	876	157	-876	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGCTAACTCACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	25694750	25700016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_25694848_25695896_25695928_25696427_25696517_25697996_25698094_25698689_25698766_25699890
ENSMUSG00000021868.8_25694799_25700092_1	chr14	+	544	6	FSM	ENSMUSG00000021868.8	ENSMUST00000022419.7	1549	6	205	800	205	-800	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTTGCACCCACTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	25694798	25700092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_25694848_25695896_25695928_25696427_25696517_25697996_25698094_25698689_25698766_25699890
ENSMUSG00000021870.18_26134328_26148571_1	chr14	-	2513	6	ISM	ENSMUSG00000021870.18	ENSMUST00000038522.10	4501	23	106324	-2	106202	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATGTTTGAGTTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	26148571	26134327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389
ENSMUSG00000021870.18_26134328_26148624_1	chr14	-	2566	6	ISM	ENSMUSG00000021870.18	ENSMUST00000038522.10	4501	23	106271	-2	106149	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATGTTTGAGTTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	26148624	26134327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389
ENSMUSG00000021870.18_26134328_26148679_1	chr14	-	2621	6	ISM	ENSMUSG00000021870.18	ENSMUST00000038522.10	4501	23	106216	-2	106094	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATGTTTGAGTTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	26148679	26134327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389
ENSMUSG00000021870.18_26134555_26151065_1	chr14	-	2623	8	ISM	ENSMUSG00000021870.18	ENSMUST00000038522.10	4501	23	103830	225	103708	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGAATGCTGATATGCC	NA	NA	NA	NA	NA	NA	NA	NA	26151065	26134554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942
ENSMUSG00000021870.18_26134845_26139317_1	chr14	-	1349	2	ISM	ENSMUSG00000021870.18	ENSMUST00000090359.11	4076	22	115456	290	115456	-290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAGGTTTTCTTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	26139317	26134844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26136144_26139267
ENSMUSG00000021870.18_26134891_26139372_1	chr14	-	1358	2	ISM	ENSMUSG00000021870.18	ENSMUST00000090359.11	4076	22	115401	336	115401	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTGTGCAGCACCATAG	NA	NA	NA	NA	NA	NA	NA	NA	26139372	26134890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26136144_26139267
ENSMUSG00000021870.18_26135067_26181327_1	chr14	-	2608	15	ISM	ENSMUSG00000021870.18	ENST00000671191.1	5530	25	74709	785	73446	384	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTAGCAGATTTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	26181327	26135066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196
ENSMUSG00000021870.18_26135109_26147752_1	chr14	-	1375	4	ISM	ENSMUSG00000021870.18	ENSMUST00000090359.11	4076	22	107021	554	107021	342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGTGGAGCTAATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	26147752	26135108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26136144_26139267_26139403_26143575_26143748_26147719
ENSMUSG00000021870.18_26135192_26147801_1	chr14	-	1341	4	ISM	ENSMUSG00000021870.18	ENSMUST00000090359.11	4076	22	106972	637	106972	259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCATCTGTTCCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	26147801	26135191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26136144_26139267_26139403_26143575_26143748_26147719
ENSMUSG00000021870.18_26135262_26183511_1	chr14	-	2547	16	ISM	ENSMUSG00000021870.18	ENST00000671191.1	5530	25	72525	980	71262	189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAATGTTTTCTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	26183511	26135261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196_26181366_26183415
ENSMUSG00000021870.18_26135571_26186779_1	chr14	-	2550	19	ISM	ENSMUSG00000021870.18	ENST00000671191.1	5530	25	69257	1289	67994	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAAACCACTGAGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	26186779	26135570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722
ENSMUSG00000021870.18_26135885_26163810_1	chr14	-	1425	10	ISM	ENSMUSG00000021870.18	ENSMUST00000090359.11	4076	22	90963	1330	90963	-434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGGATAGAAAGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	26163810	26135884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26136144_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729
ENSMUSG00000021870.18_26135885_26204123_1	chr14	-	2598	23	ISM	ENSMUSG00000021870.18	ENST00000671191.1	5530	25	51913	1603	50650	-434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGGATAGAAAGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	26204123	26135884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973
ENSMUSG00000021870.18_26136055_26254609_1	chr14	-	2553	24	ISM	ENSMUSG00000021870.18	ENST00000671191.1	5530	25	1427	1773	164	-604	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACAGTGTGTCTTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	26254609	26136054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ENSMUSG00000021870.18_26136082_26181327_1	chr14	-	1401	12	ISM	ENSMUSG00000021870.18	ENST00000295952.7	4366	21	73560	1754	73446	-631	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCAGGTCTGGCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	26181327	26136081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26136144_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26181196
ENSMUSG00000021870.18_26143605_26184840_1	chr14	-	1461	12	ISM	ENSMUSG00000021870.18	ENST00000295952.7	4366	21	70047	9277	69933	-8154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCAAGCAAAGGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	26184840	26143604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26181196_26181366_26183415_26183554_26184730
ENSMUSG00000021870.18_26143605_26255021_1	chr14	-	2622	21	ISM	ENSMUSG00000021870.18	ENSMUST00000139075.8	4508	23	1029	8154	-126	-8154	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCAAGCAAAGGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	26255021	26143604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ENSMUSG00000021870.18_26147720_26186427_1	chr14	-	1421	12	ISM	ENSMUSG00000021870.18	ENST00000295952.7	4366	21	68460	13392	68346	-12269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGAGCATTGCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	26186427	26147719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26181196_26181366_26183415_26183554_26184730_26184872_26186355
ENSMUSG00000021870.18_26148480_26191555_1	chr14	-	1409	14	ISM	ENSMUSG00000021870.18	ENST00000295952.7	4366	21	63332	14152	63218	-13029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATGAAATCAGAAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	26191555	26148479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518
ENSMUSG00000021870.18_26148480_26255300_1	chr14	-	2550	19	ISM	ENSMUSG00000021870.18	ENSMUST00000139075.8	4508	23	750	13029	-4	-13029	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATGAAATCAGAAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	26255300	26148479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ENSMUSG00000021870.18_26148480_26255365_1	chr14	-	2615	19	ISM	ENSMUSG00000021870.18	ENSMUST00000139075.8	4508	23	685	13029	-69	-13029	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATGAAATCAGAAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	26255365	26148479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ENSMUSG00000021870.18_26148593_26255221_1	chr14	-	2070	15	ISM	ENSMUSG00000021870.18	ENST00000428312.6	4606	20	75	14192	75	-13142	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCAGCAGAGGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	26255221	26148592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26148711_26149396_26149472_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ENSMUSG00000021870.18_26148703_26204036_1	chr14	-	1322	16	ISM	ENSMUSG00000021870.18	ENST00000295952.7	4366	21	50851	14375	50737	-13252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGTTACACATGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	26204036	26148702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973
ENSMUSG00000021870.18_26148703_26255454_1	chr14	-	2481	19	ISM	ENSMUSG00000021870.18	ENSMUST00000139075.8	4508	23	596	13252	-158	-13252	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGTTACACATGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	26255454	26148702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ENSMUSG00000021870.18_26149429_26255562_1	chr14	-	2549	18	ISM	ENSMUSG00000021870.18	ENSMUST00000139075.8	4508	23	488	13978	-266	-13978	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATCAGCTAAACAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	26255562	26149428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ENSMUSG00000021870.18_26150976_26254575_1	chr14	-	1384	15	ISM	ENSMUSG00000021870.18	ENST00000295952.7	4366	21	312	16648	198	-15525	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACAAGTAAACAAAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	26254575	26150975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ENSMUSG00000021870.18_26160103_26254773_1	chr14	-	1432	13	ISM	ENSMUSG00000021870.18	ENST00000295952.7	4366	21	114	25775	0	-24652	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCGGGCCAAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	26254773	26160102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26160184_26163729_26163790_26174692_26174756_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ENSMUSG00000021870.18_26174693_26254895_1	chr14	-	1413	11	ISM	ENSMUSG00000021870.18	ENST00000295952.7	4366	21	-8	40365	0	-39242	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACAGAGTATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	26254895	26174692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26174756_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ENSMUSG00000021870.18_26183465_26255112_1	chr14	-	1349	9	ISM	ENSMUSG00000021870.18	ENSMUST00000139075.8	4508	23	938	48014	184	-48014	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATGGAGCAGTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	26255112	26183464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ENSMUSG00000021870.18_26186738_26255444_1	chr14	-	1364	6	ISM	ENSMUSG00000021870.18	ENSMUST00000139075.8	4508	23	606	51287	-148	-51287	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTAGTTGGCAGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	26255444	26186737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ENSMUSG00000021870.18_26254483_26256050_1	chr14	-	1345	2	ISM	ENSMUSG00000021870.18	ENSMUST00000102956.8	5476	24	36	120160	0	-119032	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTCGCTATAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	26256050	26254482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26255780_26256002
ENSMUSG00000021876.16_51338851_51342728_1	chr14	+	561	2	FSM	ENSMUSG00000072115.12	ENST00000553909.1	562	2	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGCAGCTGTTACAGC	NA	NA	NA	NA	NA	NA	NA	NA	51338850	51342728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_51338947_51342263
ENSMUSG00000021877.13_26359229_26377975_1	chr14	+	1727	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	0	438	0	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAAATGATTTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	26359228	26377975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ENSMUSG00000021877.13_26359381_26378069_1	chr14	+	1669	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	152	344	-121	100	multi-exon	FALSE	canonical	NA	NA	NA	NA	2965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTGAATTTACTTATGG	NA	NA	NA	NA	NA	NA	NA	NA	26359380	26378069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ENSMUSG00000021877.13_26359502_26378145_1	chr14	+	1624	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	273	268	0	176	multi-exon	FALSE	canonical	NA	NA	NA	NA	2498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGAAGAATTTTAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	26359501	26378145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ENSMUSG00000021877.13_26367813_26378431_1	chr14	+	1771	5	ISM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	8584	-18	8311	18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTTGACAAGTGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	26367812	26378431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ENSMUSG00000021884.19_31329373_31332121_1	chr14	-	691	2	ISM	ENSMUSG00000021884.19	ENSMUST00000022437.16	2644	17	30800	217	30714	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGATGTGAGTTTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	31332121	31329372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31330001_31332058
ENSMUSG00000021884.19_31329622_31337341_1	chr14	-	696	4	ISM	ENSMUSG00000021884.19	ENSMUST00000167066.8	1566	15	25494	-346	25494	346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTGTGGTATGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	31337341	31329621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319
ENSMUSG00000021884.19_31329622_31337395_1	chr14	-	750	4	ISM	ENSMUSG00000021884.19	ENSMUST00000167066.8	1566	15	25440	-346	25440	346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTGTGGTATGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	31337395	31329621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319
ENSMUSG00000021884.19_31332148_31344876_1	chr14	-	893	8	ISM	ENSMUSG00000021884.19	ENST00000628377.2	1677	15	17995	90	17959	-90	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTCGCTGAGGCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	31344876	31332147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795
ENSMUSG00000021884.19_31336161_31348409_1	chr14	-	963	8	ISM	ENSMUSG00000021884.19	ENST00000628377.2	1677	15	14462	4103	14426	-4103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGACTCAGAACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	31348409	31336160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296
ENSMUSG00000021884.19_31336252_31352009_1	chr14	-	892	9	ISM	ENSMUSG00000021884.19	ENST00000628377.2	1677	15	10862	4194	10826	-4194	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCTTGGTAGTAAACAAT	NA	NA	NA	NA	NA	NA	NA	NA	31352009	31336251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989
ENSMUSG00000021884.19_31337319_31352934_1	chr14	-	968	9	ISM	ENSMUSG00000021884.19	ENST00000628377.2	1677	15	9937	5261	9901	-5261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAACATTATTTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	31352934	31337318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917
ENSMUSG00000021884.19_31337416_31352953_1	chr14	-	890	9	ISM	ENSMUSG00000021884.19	ENST00000628377.2	1677	15	9918	5358	9882	-5358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGCTAAAGACAGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	31352953	31337415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917
ENSMUSG00000021884.19_31338316_31357742_1	chr14	-	993	10	ISM	ENSMUSG00000021884.19	ENST00000628377.2	1677	15	5129	6258	5093	-6258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACTCCGAGGAGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	31357742	31338315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31356155_31356237_31357700
ENSMUSG00000021884.19_31338405_31362494_1	chr14	-	297	4	ISM	ENSMUSG00000021884.19	ENST00000435217.6	1027	8	377	6347	341	-6347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCCGAGACTCTTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	31362494	31338404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31338472_31340928_31341031_31341801_31341886_31362450
ENSMUSG00000021884.19_31338432_31362475_1	chr14	-	901	11	ISM	ENSMUSG00000021884.19	ENST00000628377.2	1677	15	396	6374	360	-6374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCTACCACGTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	31362475	31338431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31356155_31356237_31357700_31357742_31362450
ENSMUSG00000021884.19_31340971_31362835_1	chr14	-	989	11	ISM	ENSMUSG00000021884.19	ENST00000628377.2	1677	15	36	8913	0	-8913	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCTGAGGGAGAAAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	31362835	31340970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31356155_31356237_31357700_31357742_31362450_31362556_31362745
ENSMUSG00000021891.9_31198777_31209575_1	chr14	-	3181	3	ISM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	7422	0	7390	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGTTTCTTGATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	31209575	31198776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31201768_31204747_31204890_31209527
ENSMUSG00000021891.9_31199045_31214380_1	chr14	-	3138	4	ISM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	2617	268	2585	-268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATATTCATGTGTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	31214380	31199044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278
ENSMUSG00000021891.9_31199244_31215708_1	chr14	-	3127	5	ISM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	1289	467	1257	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCTGACCTGGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	31215708	31199243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553
ENSMUSG00000021891.9_31199306_31215764_1	chr14	-	3121	5	ISM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	1233	529	1201	-529	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTTGAGGAAGACATGG	NA	NA	NA	NA	NA	NA	NA	NA	31215764	31199305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553
ENSMUSG00000021891.9_31199557_31216949_1	chr14	-	3118	6	FSM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	48	780	16	-780	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCCCCTTGATCACTAA	NA	NA	NA	NA	NA	NA	NA	NA	31216949	31199556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ENSMUSG00000021892.15_31097030_31097663_1	chr14	-	232	2	ISM	ENSMUSG00000021892.15	ENSMUST00000100730.10	2633	8	41971	1288	41971	-1288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAACCCGGATGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	31097663	31097029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31097159_31097560
ENSMUSG00000021892.15_31097659_31099419_1	chr14	-	235	2	ISM	ENSMUSG00000021892.15	ENSMUST00000100730.10	2633	8	40215	1917	40215	-1917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTCCCTGTCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	31099419	31097658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31097822_31099347
ENSMUSG00000021892.15_31109761_31156065_1	chr14	-	235	3	ISM	ENSMUSG00000021892.15	ENSMUST00000091903.5	2684	9	1957	14019	1957	-14019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTGAGCAGCGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	31156065	31109760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31109841_31133497_31133627_31156039
ENSMUSG00000021895.11_27083544_27101677_1	chr14	+	345	3	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	347	22490	347	-22490	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCAGGTGCTCACGGCC	NA	NA	NA	NA	NA	NA	NA	NA	27083543	27101677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27083651_27084746_27084855_27101547
ENSMUSG00000021895.11_27083612_27101716_1	chr14	+	316	3	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	415	22451	415	-22451	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAAGCTCGGGACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	27083611	27101716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27083651_27084746_27084855_27101547
ENSMUSG00000021895.11_27084793_27107838_1	chr14	+	333	4	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	1596	16329	1596	-16329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGAACAGGAACTGAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	27084792	27107838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27084855_27101547_27101719_27106110_27106174_27107801
ENSMUSG00000021895.11_27101662_27115947_1	chr14	+	352	5	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	18465	8220	18465	-8220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGGACCACAAAAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	27101661	27115947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889
ENSMUSG00000021895.11_27115892_27119588_1	chr14	+	325	2	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	32695	4579	32695	-4579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCGGCTCCTTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	27115891	27119588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27116148_27119519
ENSMUSG00000021895.11_27115997_27122237_1	chr14	+	338	3	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	32800	1930	32800	-1930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCAAGAAGTGCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	27115996	27122237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27116148_27119519_27119691_27122221
ENSMUSG00000021895.11_27116123_27122353_1	chr14	+	328	3	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	32926	1814	32926	-1814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAAGTGCGGCTGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	27116122	27122353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27116148_27119519_27119691_27122221
ENSMUSG00000021895.11_27119559_27123604_1	chr14	+	337	3	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	36362	563	36362	-563	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTTTCAAAAATGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	27119558	27123604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27119691_27122221_27122409_27123586
ENSMUSG00000021895.11_27119624_27123664_1	chr14	+	332	3	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	36427	503	36427	-503	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACAGCAGTGGCTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	27119623	27123664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27119691_27122221_27122409_27123586
ENSMUSG00000021895.11_27122286_27123824_1	chr14	+	361	2	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	39089	343	39089	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGCGAGTCGGACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	27122285	27123824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27122409_27123586
ENSMUSG00000021895.11_27122344_27123870_1	chr14	+	349	2	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	39147	297	39147	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTGAGCGGATGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	27122343	27123870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27122409_27123586
ENSMUSG00000021900.11_31363014_31389857_1	chr14	+	1645	4	FSM	ENSMUSG00000021900.11	ENSMUST00000090147.7	2324	4	0	679	0	-679	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAGGAAGTAGGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	31363013	31389857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_31363093_31384026_31384283_31387838_31387989_31388697
ENSMUSG00000021900.11_31384094_31421642_1	chr14	+	559	3	FSM	ENSMUSG00000021900.11	ENST00000673467.1	971	3	70	342	70	-342	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTAGAAAATTCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	31384093	31421642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_31384283_31387838_31387989_31421422
ENSMUSG00000021900.11_31384163_31421689_1	chr14	+	537	3	FSM	ENSMUSG00000021900.11	ENST00000673467.1	971	3	139	295	139	-295	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAAAGCACACATAT	NA	NA	NA	NA	NA	NA	NA	NA	31384162	31421689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_31384283_31387838_31387989_31421422
ENSMUSG00000021900.11_31384175_31390053_1	chr14	+	1614	3	ISM	ENSMUSG00000021900.11	ENSMUST00000090147.7	2324	4	21161	483	151	-483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTAGTCTGTCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	31384174	31390053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_31384283_31387838_31387989_31388697
ENSMUSG00000021900.11_31384207_31421751_1	chr14	+	555	3	FSM	ENSMUSG00000021900.11	ENST00000673467.1	971	3	183	233	183	-233	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATAGAAATGTAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	31384206	31421751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_31384283_31387838_31387989_31421422
ENSMUSG00000021900.11_31387933_31390253_1	chr14	+	1612	2	ISM	ENSMUSG00000021900.11	ENSMUST00000090147.7	2324	4	24919	283	3909	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTCTCCAAGCAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	31387932	31390253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_31387989_31388697
ENSMUSG00000021901.11_30973407_30981901_2	chr14	+	3455	17	NNC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGGTCGGTAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	30973406	30981901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976128_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ENSMUSG00000021902.8_30959646_30972965_1	chr14	-	1664	10	FSM	ENSMUSG00000021902.8	ENSMUST00000226565.2	1971	10	307	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGTGAATTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	30972965	30959645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_30960111_30960293_30960440_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
ENSMUSG00000021902.8_30959890_30962942_1	chr14	-	848	6	NNC	ENSMUSG00000021902.8	novel	1761	11	NA	NA	10023	1	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGTTCCTGCCCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	30962942	30959889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_30960111_30960317_30960440_30961076_30961194_30961587_30961695_30962230_30962391_30962821
ENSMUSG00000021902.8_30959967_30970016_1	chr14	-	894	8	ISM	ENSMUSG00000021902.8	ENST00000327906.8	1761	11	3198	76	2949	-76	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCGAGTCCTCTGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	30970016	30959966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30960111_30960317_30960440_30961076_30961194_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999
ENSMUSG00000021902.8_30960036_30970056_1	chr14	-	865	8	ISM	ENSMUSG00000021902.8	ENST00000327906.8	1761	11	3158	145	2909	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTACCAGCCTGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	30970056	30960035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30960111_30960317_30960440_30961076_30961194_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999
ENSMUSG00000021902.8_30960395_30971611_1	chr14	-	848	9	ISM	ENSMUSG00000021902.8	ENST00000327906.8	1761	11	1603	504	1354	-504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGGGACTGCTCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	30971611	30960394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30960440_30961076_30961194_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564
ENSMUSG00000021902.8_30961144_30972712_1	chr14	-	850	9	ISM	ENSMUSG00000021902.8	ENST00000327906.8	1761	11	502	1253	253	-1253	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATCGGCATTGTGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	30972712	30961143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30961194_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
ENSMUSG00000021902.8_30961173_30972789_1	chr14	-	898	9	ISM	ENSMUSG00000021902.8	ENST00000327906.8	1761	11	425	1282	176	-1282	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGGCTTTCTCCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	30972789	30961172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30961194_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
ENSMUSG00000021902.8_30962231_30972965_1	chr14	-	941	7	NNC	ENSMUSG00000021902.8	novel	1971	10	NA	NA	0	-2340	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTCTCTCTGTACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	30972965	30962230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_30962391_30962815_30962941_30963682_30963785_30970004_30970092_30970951_30971005_30971564_30971675_30972661
ENSMUSG00000021902.8_30962231_30972965_2	chr14	-	946	7	ISM	ENSMUSG00000021902.8	ENST00000327906.8	1761	11	249	2340	0	-2340	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTCTCTCTGTACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	30972965	30962230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
ENSMUSG00000021902.8_30963693_30973256_1	chr14	-	937	5	NNC	ENSMUSG00000021902.8	novel	1761	11	NA	NA	16	-3802	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAGAAGGTTAGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	30973256	30963692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_30963785_30970004_30970092_30970951_30971005_30971564_30971675_30972661
ENSMUSG00000021902.8_30963704_30973256_1	chr14	-	931	5	ISM	ENSMUSG00000021902.8	ENST00000327906.8	1761	11	-42	3813	16	-3813	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTACGGGCTTCTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	30973256	30963703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
ENSMUSG00000021904.7_30942592_30944570_1	chr14	+	792	8	ISM	ENSMUSG00000021904.7	ENST00000231721.7	2625	15	78	5990	78	-5990	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGCACTGTCAGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	30942591	30944570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30942677_30942786_30942850_30943077_30943198_30943477_30943569_30943671_30943789_30943950_30944097_30944292_30944408_30944515
ENSMUSG00000021904.7_30942785_30944928_1	chr14	+	776	8	ISM	ENSMUSG00000021904.7	ENST00000231721.7	2625	15	271	5632	271	-5632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTTCAATGGGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	30942784	30944928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30942850_30943077_30943198_30943477_30943569_30943671_30943789_30943950_30944097_30944292_30944408_30944515_30944586_30944876
ENSMUSG00000021904.7_30943161_30945303_1	chr14	+	779	8	ISM	ENSMUSG00000021904.7	ENST00000231721.7	2625	15	647	5257	647	-5257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACGAGGTGTTGCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	30943160	30945303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30943198_30943477_30943569_30943671_30943789_30943950_30944097_30944292_30944408_30944515_30944586_30944876_30945022_30945245
ENSMUSG00000021904.7_30943727_30945611_1	chr14	+	815	7	ISM	ENSMUSG00000021904.7	ENST00000231721.7	2625	15	1213	4949	1213	-4949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGAACCTGAAGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	30943726	30945611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30943789_30943950_30944097_30944292_30944408_30944515_30944586_30944876_30945022_30945245_30945478_30945566
ENSMUSG00000021904.7_30944048_30947925_1	chr14	+	795	8	ISM	ENSMUSG00000021904.7	ENST00000231721.7	2625	15	1534	2635	1534	-2635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGTGAGACTTACGGCA	NA	NA	NA	NA	NA	NA	NA	NA	30944047	30947925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30944097_30944292_30944408_30944515_30944586_30944876_30945022_30945245_30945478_30945566_30945659_30946576_30946619_30947875
ENSMUSG00000021904.7_30944883_30948368_1	chr14	+	760	6	NIC	ENSMUSG00000021904.7	novel	2625	15	NA	NA	2369	-2192	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTGGCACAGAGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	30944882	30948368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_+_30945022_30945245_30945478_30945566_30945659_30946576_30946619_30947875_30948111_30948348
ENSMUSG00000021904.7_30944922_30948436_1	chr14	+	789	6	NIC	ENSMUSG00000021904.7	novel	2625	15	NA	NA	2408	-2124	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTCTTACAAAGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	30944921	30948436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_+_30945022_30945245_30945478_30945566_30945659_30946576_30946619_30947875_30948111_30948348
ENSMUSG00000021904.7_30945300_30949796_1	chr14	+	773	6	NIC	ENSMUSG00000021904.7	novel	2625	15	NA	NA	2786	-764	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCTTCTCCCAGACCG	NA	NA	NA	NA	NA	NA	NA	NA	30945299	30949796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_+_30945478_30945566_30945659_30946576_30946619_30947875_30948111_30948348_30948477_30949698
ENSMUSG00000021904.7_30945372_30949873_1	chr14	+	778	6	NIC	ENSMUSG00000021904.7	novel	2625	15	NA	NA	2858	-687	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGTCAAGGCTAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	30945371	30949873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_+_30945478_30945566_30945659_30946576_30946619_30947875_30948111_30948348_30948477_30949698
ENSMUSG00000021904.7_30945428_30949920_1	chr14	+	769	6	NIC	ENSMUSG00000021904.7	novel	2625	15	NA	NA	2914	-640	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCCCCAAGACTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	30945427	30949920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_+_30945478_30945566_30945659_30946576_30946619_30947875_30948111_30948348_30948477_30949698
ENSMUSG00000021904.7_30945590_30950033_1	chr14	+	809	5	NIC	ENSMUSG00000021904.7	novel	2625	15	NA	NA	3076	-527	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTCCTTCCGCGGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	30945589	30950033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_+_30945659_30946576_30946619_30947875_30948111_30948348_30948477_30949698
ENSMUSG00000021904.7_30947875_30950173_1	chr14	+	843	3	ISM	ENSMUSG00000021904.7	ENST00000231721.7	2625	15	5361	387	5361	-387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCAGGTGGTCGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	30947874	30950173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30948115_30948348_30948477_30949698
ENSMUSG00000021904.7_30948008_30950259_1	chr14	+	796	3	ISM	ENSMUSG00000021904.7	ENST00000231721.7	2625	15	5494	301	5494	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTACCTCTTAGAGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	30948007	30950259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30948115_30948348_30948477_30949698
ENSMUSG00000021904.7_30948058_30950314_1	chr14	+	801	3	ISM	ENSMUSG00000021904.7	ENST00000231721.7	2625	15	5544	246	5544	-246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGCCTTGCACCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	30948057	30950314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30948115_30948348_30948477_30949698
ENSMUSG00000021904.7_30948444_30950440_1	chr14	+	775	2	ISM	ENSMUSG00000021904.7	ENST00000231721.7	2625	15	5930	120	5930	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGAGCACATTTCCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	30948443	30950440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30948477_30949698
ENSMUSG00000021905.15_31804715_31807566_1	chr14	-	764	3	FSM	ENSMUSG00000021905.15	ENSMUST00000067955.12	2953	3	0	2189	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCAGGAGTCCCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	31807566	31804714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_31805204_31806863_31806939_31807366
ENSMUSG00000021906.15_31807744_31824612_1	chr14	+	1455	8	FSM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	374	547	374	-547	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGGCCACATTTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	31807743	31824612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
ENSMUSG00000021906.15_31813609_31824881_1	chr14	+	1441	7	ISM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	6239	278	6239	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTCTGGAATTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	31813608	31824881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
ENSMUSG00000021910.16_30892887_30899369_1	chr14	-	3411	6	ISM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	14118	0	14118	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	30899369	30892886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286
ENSMUSG00000021910.16_30892887_30899416_1	chr14	-	3458	6	ISM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	14071	0	14071	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	30899416	30892886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286
ENSMUSG00000021910.16_30893094_30899572_1	chr14	-	3407	6	ISM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	13915	207	13915	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTAGCAGAGTACACAGG	NA	NA	NA	NA	NA	NA	NA	NA	30899572	30893093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286
ENSMUSG00000021910.16_30893323_30902858_1	chr14	-	3405	8	ISM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	10629	436	10629	-436	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATATGCCAGCCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	30902858	30893322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778
ENSMUSG00000021910.16_30893493_30907298_1	chr14	-	3422	10	ISM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	6189	606	6189	-606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTAGCCTGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	30907298	30893492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268
ENSMUSG00000021910.16_30893518_30907377_1	chr14	-	3476	10	ISM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	6110	631	6110	-631	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCAGCCCTGGCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	30907377	30893517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268
ENSMUSG00000021910.16_30893664_30908838_1	chr14	-	3458	11	ISM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	4649	777	4649	-777	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTGGCCAGGGCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	30908838	30893663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715
ENSMUSG00000021910.16_30893788_30909164_1	chr14	-	3489	12	ISM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	4323	901	4323	-901	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGCTCATGGGCTACTAT	NA	NA	NA	NA	NA	NA	NA	NA	30909164	30893787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015
ENSMUSG00000021910.16_30893971_30910669_1	chr14	-	3486	14	ISM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	2818	1084	2818	-1084	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACCACACCTTGGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	30910669	30893970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595
ENSMUSG00000021910.16_30893971_30910701_1	chr14	-	3518	14	ISM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	2786	1084	2786	-1084	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACCACACCTTGGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	30910701	30893970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595
ENSMUSG00000021910.16_30894507_30913046_1	chr14	-	3480	15	ISM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	441	1620	441	-1620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCACTGCTTCCTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	30913046	30894506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952
ENSMUSG00000021910.16_30895578_30913487_1	chr14	-	3416	14	ISM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	0	2691	0	-2691	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCCGCCGCTACTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	30913487	30895577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341
ENSMUSG00000021910.16_30896242_30925277_1	chr14	-	3425	15	ISM	ENSMUSG00000021910.16	ENSMUST00000022469.13	5559	21	3481	3355	3380	-3355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACCTCTTCCACAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	30925277	30896241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183
ENSMUSG00000021910.16_30896384_30926482_1	chr14	-	3456	16	ISM	ENSMUSG00000021910.16	ENSMUST00000022469.13	5559	21	2276	3497	2175	-3497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGGCACAAGCAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	30926482	30896383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398
ENSMUSG00000021910.16_30896501_30928658_1	chr14	-	3474	17	ISM	ENSMUSG00000021910.16	ENSMUST00000022469.13	5559	21	100	3614	0	-3614	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAGAGGCTCCAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	30928658	30896500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ENSMUSG00000021910.16_30896561_30928668_1	chr14	-	3424	17	ISM	ENSMUSG00000021910.16	ENSMUST00000022469.13	5559	21	90	3674	-10	-3674	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCGCAGCAGAGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	30928668	30896560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ENSMUSG00000021910.16_30896623_30928758_1	chr14	-	3452	17	ISM	ENSMUSG00000021910.16	ENSMUST00000022469.13	5559	21	0	3736	0	-3736	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGCTCCAGCCGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	30928758	30896622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ENSMUSG00000021913.9_32064126_32065288_1	chr14	+	151	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	16374	4300	16374	-4300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGGGGCTCACTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	32064125	32065288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_32064148_32065159
ENSMUSG00000021913.9_32065227_32066372_1	chr14	+	153	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	17475	3216	17475	-3216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGACCAGTTCATCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	32065226	32066372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_32065288_32066280
ENSMUSG00000021916.17_30723633_30733190_1	chr14	+	1285	9	ISM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	226	758	226	-757	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATAAAACTATCTAG	NA	NA	NA	NA	NA	NA	NA	NA	30723632	30733190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30723955_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077
ENSMUSG00000021916.17_30723754_30733522_1	chr14	+	1245	10	FSM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	347	426	347	-425	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAGAACTGCTTCATAT	NA	NA	NA	NA	NA	NA	NA	NA	30723753	30733522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_30723955_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ENSMUSG00000021916.17_30723834_30733588_1	chr14	+	1231	10	FSM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	427	360	427	-359	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTTTAATCCGAAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	30723833	30733588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_30723955_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ENSMUSG00000021916.17_30723890_30733653_1	chr14	+	1240	10	FSM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	483	295	483	-294	multi-exon	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTCAGGAAACTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	30723889	30733653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_30723955_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ENSMUSG00000021916.17_30728590_30732987_1	chr14	+	796	6	ISM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	5183	961	5183	-960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATGTAACTGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	30728589	30732987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820
ENSMUSG00000021916.17_30728590_30733778_1	chr14	+	1246	8	ISM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	5183	170	5183	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGCTCCATCTGCCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	30728589	30733778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ENSMUSG00000021916.17_30730605_30733190_1	chr14	+	816	6	ISM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	7198	758	7198	-757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATAAAACTATCTAG	NA	NA	NA	NA	NA	NA	NA	NA	30730604	30733190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077
ENSMUSG00000021916.17_30732818_30733948_1	chr14	+	790	3	ISM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	9411	0	9411	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGCTTCCCCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	30732817	30733948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30732988_30733077_30733191_30733441
ENSMUSG00000021928.10_61578656_61579530_1	chr14	-	273	2	ISM	ENSMUSG00000021928.10	ENST00000378284.6	647	4	18297	0	18228	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATTCCCAAGAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	61579530	61578655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_61578854_61579455
ENSMUSG00000021928.10_61578656_61597769_2	chr14	-	508	4	FSM	ENSMUSG00000021928.10	ENSMUST00000022494.10	10092	4	119	9465	-11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATTCCCAAGAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	61597769	61578655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_61578854_61579536_61579676_61584820_61584891_61597668
ENSMUSG00000021928.10_61578656_61597769_3	chr14	-	369	3	FSM	ENSMUSG00000021928.10	ENST00000378272.9	427	3	58	0	-11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATTCCCAAGAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	61597769	61578655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_61578854_61584820_61584891_61597668
ENSMUSG00000021928.10_61578749_61597801_1	chr14	-	308	3	FSM	ENSMUSG00000021928.10	ENST00000378272.9	427	3	26	93	26	-93	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTACCTCTGGGTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	61597801	61578748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_61578854_61584820_61584891_61597668
ENSMUSG00000021928.10_61578749_61597801_2	chr14	-	238	2	FSM	ENSMUSG00000021928.10	ENST00000378270.5	357	2	26	93	26	-93	multi-exon	FALSE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTACCTCTGGGTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	61597801	61578748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_61578854_61597668
ENSMUSG00000021929.10_61604603_61607859_1	chr14	-	699	3	ISM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	69464	1943	69464	-1943	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTACAAGCCAAATGATT	NA	NA	NA	NA	NA	NA	NA	NA	61607859	61604602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_61605179_61605576_61605672_61607831
ENSMUSG00000021929.10_61604717_61607966_1	chr14	-	692	3	ISM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	69357	2057	69357	-2057	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTTTGGTATGATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	61607966	61604716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_61605179_61605576_61605672_61607831
ENSMUSG00000021929.10_61605020_61610540_1	chr14	-	728	6	ISM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	66783	2360	66783	-2360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAGACAGCAAGCAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	61610540	61605019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406
ENSMUSG00000021929.10_61605124_61611806_1	chr14	-	693	7	ISM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	65517	2464	65517	-2464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACCCAACAGCCAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	61611806	61605123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732
ENSMUSG00000021929.10_61607917_61622153_1	chr14	-	678	7	ISM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	55170	5257	55170	-5257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTCTAGATGGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	61622153	61607916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036
ENSMUSG00000021929.10_61610422_61628672_1	chr14	-	694	7	ISM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	48651	7762	48651	-7762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAATAAATAAGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	61628672	61610421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612
ENSMUSG00000021930.15_61772097_61794078_1	chr14	-	973	4	FSM	ENSMUSG00000021930.15	ENST00000378195.6	973	4	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTATCCCTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	61794078	61772096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61793969
ENSMUSG00000021930.15_61772097_61794078_2	chr14	-	966	4	NNC	ENSMUSG00000021930.15	novel	973	4	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTATCCCTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	61794078	61772096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_61772691_61777592_61777689_61783130_61783298_61793969
ENSMUSG00000021932.14_62584010_62597963_1	chr14	+	434	5	ISM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	14493	12478	14493	-12478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAGAAGAAGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	62584009	62597963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911
ENSMUSG00000021932.14_62586028_62601549_1	chr14	+	484	6	ISM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	16511	8892	16511	-8892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTTGAAGTGAGTATC	NA	NA	NA	NA	NA	NA	NA	NA	62586027	62601549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478
ENSMUSG00000021932.14_62597918_62609880_1	chr14	+	443	6	ISM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	28401	561	28401	-561	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTTTTTGGTGCAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	62597917	62609880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ENSMUSG00000021932.14_62598856_62610007_1	chr14	+	433	5	ISM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	29339	434	29339	-434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCCAGACCCTAAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	62598855	62610007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ENSMUSG00000021938.13_56958167_56996145_1	chr14	-	2967	5	ISM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	19628	0	19628	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTGTTTTATTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	56996145	56958166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086
ENSMUSG00000021938.13_56958275_56999336_1	chr14	-	2931	6	ISM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	16437	108	16437	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTATTTCTTTTCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	56999336	56958274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290
ENSMUSG00000021938.13_56958484_57001668_1	chr14	-	2936	7	ISM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	14105	317	14105	-317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACAGCTCTTTTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	57001668	56958483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605
ENSMUSG00000021938.13_56958553_57001701_1	chr14	-	2900	7	ISM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	14072	386	14072	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGACAGTCAAGTGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	57001701	56958552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605
ENSMUSG00000021938.13_56958827_57009463_1	chr14	-	2928	8	ISM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	6310	660	6310	-660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCACCAGTGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	57009463	56958826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161
ENSMUSG00000021938.13_56958988_57015436_1	chr14	-	2956	9	FSM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	337	821	337	-821	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACTAATTCCCATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	57015436	56958987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ENSMUSG00000021939.9_63359963_63373106_1	chr14	+	339	4	ISM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	52	10266	52	-6677	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGGTCCAACTGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	63359962	63373106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056
ENSMUSG00000021939.9_63370768_63373881_1	chr14	+	375	4	ISM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	10857	9491	-2317	-5902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCGAACCTGCATTCACA	NA	NA	NA	NA	NA	NA	NA	NA	63370767	63373881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_63370916_63371413_63371500_63373056_63373172_63373855
ENSMUSG00000021939.9_63370863_63373905_1	chr14	+	304	4	ISM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	10952	9467	-2222	-5878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCGAGTCAACGTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	63370862	63373905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_63370916_63371413_63371500_63373056_63373172_63373855
ENSMUSG00000021939.9_63370897_63373974_1	chr14	+	339	4	ISM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	10986	9398	-2188	-5809	internal_fragment	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTTGGGCACCTATT	NA	NA	NA	NA	NA	NA	NA	NA	63370896	63373974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_63370916_63371413_63371500_63373056_63373172_63373855
ENSMUSG00000021939.9_63373146_63376464_1	chr14	+	248	4	ISM	ENSMUSG00000021939.9	ENST00000524500.6	641	6	61	3319	61	-3319	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTAACAGTGTGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	63373145	63376464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_63373172_63373855_63373975_63375481_63375568_63376447
ENSMUSG00000021939.9_63373930_63376501_1	chr14	+	329	4	ISM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	14019	6871	845	-3282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAATGGCCCAGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	63373929	63376501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_63373975_63375481_63375568_63375799_63375944_63376447
ENSMUSG00000021939.9_63375798_63379312_1	chr14	+	393	3	ISM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	15887	4060	2713	-471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCAGTCCCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	63375797	63379312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_63375944_63376447_63376565_63379182
ENSMUSG00000021939.9_63375903_63379724_1	chr14	+	331	4	ISM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	15992	3648	2818	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	834	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAATTGTGGCTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	63375902	63379724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_63375944_63376447_63376565_63379182_63379312_63379680
ENSMUSG00000021939.9_63376447_63379783_1	chr14	+	350	3	ISM	ENSMUSG00000021939.9	ENST00000524500.6	641	6	3362	0	3362	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTTCATTGTCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	63376446	63379783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_63376565_63379182_63379312_63379680
ENSMUSG00000021940.11_33334252_33352966_1	chr14	+	555	5	ISM	ENSMUSG00000021940.11	ENST00000506080.5	1283	9	7350	8166	7350	-8166	internal_fragment	TRUE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACCATTGCCAGAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	33334251	33352966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33334351_33336389_33336503_33344438_33344588_33346855_33346947_33352863
ENSMUSG00000021940.11_33344452_33361132_1	chr14	+	497	4	NNC	ENSMUSG00000021940.11	novel	493	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1476	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGTCCCTCGAGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	33344451	33361132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_33344588_33354862_33355079_33360276_33360344_33361054
ENSMUSG00000021940.11_33344452_33361132_2	chr14	+	491	4	NNC	ENSMUSG00000021940.11	novel	493	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGTCCCTCGAGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	33344451	33361132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_33344588_33354862_33355079_33360276_33360344_33361060
ENSMUSG00000021940.11_33344452_33361132_3	chr14	+	485	4	NNC	ENSMUSG00000021940.11	novel	493	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGTCCCTCGAGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	33344451	33361132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_33344588_33354862_33355079_33360276_33360344_33361066
ENSMUSG00000021940.11_33344525_33354881_1	chr14	+	508	4	ISM	ENSMUSG00000021940.11	ENST00000506080.5	1283	9	17623	6251	73	-6251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACACTTGCAGTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	33344524	33354881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33344588_33346855_33346947_33352863_33353199_33354862
ENSMUSG00000021940.11_33346875_33354987_1	chr14	+	532	3	ISM	ENSMUSG00000021940.11	ENST00000506080.5	1283	9	19973	6145	2423	-6145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTTGTTCACTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	33346874	33354987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33346947_33352863_33353199_33354862
ENSMUSG00000021940.11_33346922_33355062_1	chr14	+	560	3	ISM	ENSMUSG00000021940.11	ENST00000506080.5	1283	9	20020	6070	2470	-6070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAGAAGAACTACTCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	33346921	33355062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33346947_33352863_33353199_33354862
ENSMUSG00000021940.11_33353002_33361080_1	chr14	+	502	4	ISM	ENSMUSG00000021940.11	ENST00000506080.5	1283	9	26100	52	8550	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGAAGTTCTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	33353001	33361080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33353199_33354862_33355079_33360276_33360340_33361054
ENSMUSG00000021940.11_33353055_33361132_1	chr14	+	501	4	ISM	ENSMUSG00000021940.11	ENST00000506080.5	1283	9	26153	0	8603	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGTCCCTCGAGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	33353054	33361132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33353199_33354862_33355079_33360276_33360340_33361054
ENSMUSG00000021945.10_57124110_57148703_1	chr14	+	970	5	ISM	ENSMUSG00000021945.10	ENST00000382905.8	1185	6	-67	1873	0	-1873	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCAGACAGCTTACCAAC	NA	NA	NA	NA	NA	NA	NA	NA	57124109	57148703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57124252_57125251_57125315_57140152_57140655_57140915_57141010_57148534
ENSMUSG00000021945.10_57125276_57140940_1	chr14	+	866	2	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	1179	57112	0	-384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGGTAGGATGAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	57125275	57140940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57125354_57140152
ENSMUSG00000021945.10_57125276_57148817_1	chr14	+	918	4	ISM	ENSMUSG00000021945.10	ENST00000382905.8	1185	6	1099	1759	0	-1759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATTAACCTTTCACAC	NA	NA	NA	NA	NA	NA	NA	NA	57125275	57148817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57125315_57140152_57140655_57140915_57141010_57148534
ENSMUSG00000021945.10_57140329_57148817_1	chr14	+	964	2	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	16232	49235	15053	-1759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATTAACCTTTCACAC	NA	NA	NA	NA	NA	NA	NA	NA	57140328	57148817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57141010_57148534
ENSMUSG00000021945.10_57140329_57150576_1	chr14	+	871	4	ISM	ENSMUSG00000021945.10	ENST00000382905.8	1185	6	16152	0	15053	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTACTTCTGTACTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	57140328	57150576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57140655_57140915_57141010_57148534_57148818_57150408
ENSMUSG00000021945.10_57140469_57150475_1	chr14	+	891	3	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	16372	47577	15193	-101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTACATCTTGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	57140468	57150475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57141010_57148534_57148818_57150408
ENSMUSG00000021945.10_57140600_57151490_1	chr14	+	937	4	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	16503	46562	15324	914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTCTGATAATGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	57140599	57151490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57141010_57148534_57148818_57150408_57150575_57151412
ENSMUSG00000021945.10_57140683_57151542_1	chr14	+	906	4	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	16586	46510	15407	966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGCTGGGAATAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	57140682	57151542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57141010_57148534_57148818_57150408_57150575_57151412
ENSMUSG00000021945.10_57140881_57158062_1	chr14	+	882	6	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	16784	39990	15605	7486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTACTGGTTGCCGAACA	NA	NA	NA	NA	NA	NA	NA	NA	57140880	57158062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043
ENSMUSG00000021945.10_57140915_57158134_1	chr14	+	920	6	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	16818	39918	15639	7558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATATTGTTCAACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	57140914	57158134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043
ENSMUSG00000021945.10_57148606_57159051_1	chr14	+	907	6	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	24509	39001	23330	8475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTGTGTGGCTAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	57148605	57159051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958
ENSMUSG00000021945.10_57148719_57163391_1	chr14	+	911	7	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	24622	34661	23443	12815	internal_fragment	TRUE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAGAAATCTTGGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	57148718	57163391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297
ENSMUSG00000021945.10_57150409_57165704_1	chr14	+	896	7	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	26312	32348	25133	15128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTACATATTGCGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	57150408	57165704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643
ENSMUSG00000021945.10_57150432_57165794_1	chr14	+	963	7	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	26335	32258	25156	15218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTGTGTATACAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	57150431	57165794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643
ENSMUSG00000021945.10_57151443_57169635_1	chr14	+	880	7	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	27346	28417	26167	19059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCACTAAAGAACTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	57151442	57169635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545
ENSMUSG00000021945.10_57151565_57175019_1	chr14	+	894	8	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	27468	23033	26289	-23033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCGTGGCGAAATGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	57151564	57175019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966
ENSMUSG00000021945.10_57158141_57179611_1	chr14	+	969	8	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	34044	18441	32865	-18441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCTCCTTAGACCACTG	NA	NA	NA	NA	NA	NA	NA	NA	57158140	57179611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454
ENSMUSG00000021945.10_57158999_57180750_1	chr14	+	889	8	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	34902	17302	33723	-17302	internal_fragment	TRUE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGTGTATGTCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	57158998	57180750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709
ENSMUSG00000021945.10_57165677_57181645_1	chr14	+	861	7	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	41580	16407	40401	-16407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGATGACTGAAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	57165676	57181645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522
ENSMUSG00000021945.10_57169619_57185499_1	chr14	+	941	8	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	45522	12553	44343	-12553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAATTTGTTAATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	57169618	57185499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403
ENSMUSG00000021945.10_57174993_57187070_1	chr14	+	918	8	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	50896	10982	49717	-10982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACATTGGGTCAAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	57174992	57187070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966
ENSMUSG00000021945.10_57174993_57187129_1	chr14	+	977	8	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	50896	10923	49717	-10923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGTAAGTGTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	57174992	57187129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966
ENSMUSG00000021945.10_57179481_57187740_1	chr14	+	889	7	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	55384	10312	54205	-10312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCACCTGACAGCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	57179480	57187740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633
ENSMUSG00000021945.10_57180737_57193751_1	chr14	+	918	7	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	56640	4301	55461	-4301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATGCTATTTTAAATATG	NA	NA	NA	NA	NA	NA	NA	NA	57180736	57193751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636
ENSMUSG00000021945.10_57181565_57194404_1	chr14	+	883	7	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	57468	3648	56289	-3648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACACTAAGTATTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	57181564	57194404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308
ENSMUSG00000021945.10_57181609_57194467_1	chr14	+	902	7	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	57512	3585	56333	-3585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTAGGCATTGGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57181608	57194467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308
ENSMUSG00000021945.10_57184007_57195690_1	chr14	+	902	7	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	59910	2362	58731	-2362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGTTGAAAACACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	57184006	57195690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638
ENSMUSG00000021945.10_57186986_57197234_1	chr14	+	853	6	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	62889	818	61710	-818	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGCCCTGTCTGGTACA	NA	NA	NA	NA	NA	NA	NA	NA	57186985	57197234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ENSMUSG00000021945.10_57187011_57197350_1	chr14	+	944	6	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	62914	702	61735	-702	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACACAGACTAAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	57187010	57197350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ENSMUSG00000021945.10_57194376_57197809_1	chr14	+	944	3	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	70279	243	69100	-243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTTTGTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	57194375	57197809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57194561_57195638_57195760_57197171
ENSMUSG00000021945.10_57194440_57197825_1	chr14	+	896	3	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	70343	227	69164	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTATGTTTTAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	57194439	57197825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57194561_57195638_57195760_57197171
ENSMUSG00000021945.10_57195641_57197988_1	chr14	+	936	2	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	71544	64	70365	-64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCACTTGTGACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	57195640	57197988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57195760_57197171
ENSMUSG00000021945.10_57195705_57198033_1	chr14	+	917	2	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	71608	19	70429	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTATGTATATATGTG	NA	NA	NA	NA	NA	NA	NA	NA	57195704	57198033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_57195760_57197171
ENSMUSG00000021948.18_30317313_30332267_1	chr14	-	2544	17	ISM	ENSMUSG00000021948.18	ENSMUST00000112210.11	2777	18	15900	2	-8	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGCTGTGGGGACATT	NA	NA	NA	NA	NA	NA	NA	NA	30332267	30317312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144
ENSMUSG00000021950.16_33807982_33815900_1	chr14	+	583	7	ISM	ENSMUSG00000021950.16	ENSMUST00000120077.2	1208	12	0	6078	0	-4045	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAACGGTACCTTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	33807981	33815900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33808034_33811467_33811559_33812563_33812659_33813757_33813872_33814486_33814578_33815334_33815415_33815840
ENSMUSG00000021950.16_33807982_33815901_1	chr14	+	413	5	ISM	ENSMUSG00000021950.16	ENST00000611655.1	814	9	21	4044	0	-4044	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACGGTACCTTGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	33807981	33815901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33808034_33811467_33811559_33812563_33812659_33813757_33813872_33815840
ENSMUSG00000021950.16_33807982_33819946_1	chr14	+	772	9	NNC	ENSMUSG00000021950.16	novel	799	9	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTCAACTGTACTGATG	NA	NA	NA	NA	NA	NA	NA	NA	33807981	33819946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_33808034_33813757_33813872_33814493_33814578_33815334_33815415_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813
ENSMUSG00000021950.16_33807982_33819946_2	chr14	+	772	9	NNC	ENSMUSG00000021950.16	novel	799	9	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTCAACTGTACTGATG	NA	NA	NA	NA	NA	NA	NA	NA	33807981	33819946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_33808034_33813757_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819820
ENSMUSG00000021950.16_33807982_33819946_3	chr14	+	771	9	NNC	ENSMUSG00000021950.16	novel	799	9	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTCAACTGTACTGATG	NA	NA	NA	NA	NA	NA	NA	NA	33807981	33819946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_33808034_33813757_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354_33816449_33816687_33816776_33818486_33818546_33819813
ENSMUSG00000021950.16_33807982_33819946_4	chr14	+	774	9	NNC	ENSMUSG00000021950.16	novel	799	9	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTCAACTGTACTGATG	NA	NA	NA	NA	NA	NA	NA	NA	33807981	33819946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_33808034_33813757_33813872_33814486_33814578_33815334_33815415_33815845_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813
ENSMUSG00000021950.16_33807982_33819946_5	chr14	+	779	9	FSM	ENSMUSG00000021950.16	ENST00000613703.4	799	9	21	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTCAACTGTACTGATG	NA	NA	NA	NA	NA	NA	NA	NA	33807981	33819946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_33808034_33813757_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813
ENSMUSG00000021950.16_33811467_33816448_1	chr14	+	455	5	ISM	ENSMUSG00000021950.16	ENST00000611655.1	814	9	3506	3497	3485	-3497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGGGCAGAAGTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	33811466	33816448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33811559_33812563_33812659_33813757_33813872_33815840_33815901_33816354
ENSMUSG00000021950.16_33811467_33816448_2	chr14	+	626	7	ISM	ENSMUSG00000021950.16	ENSMUST00000120077.2	1208	12	3485	5530	3485	-3497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGGGCAGAAGTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	33811466	33816448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33811559_33812563_33812659_33813757_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354
ENSMUSG00000021950.16_33812563_33816775_1	chr14	+	460	5	ISM	ENSMUSG00000021950.16	ENST00000611655.1	814	9	4602	3170	4581	-3170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAAGGGGGCTTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	33812562	33816775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33812659_33813757_33813872_33815840_33815901_33816354_33816449_33816679
ENSMUSG00000021950.16_33812563_33816775_2	chr14	+	631	7	ISM	ENSMUSG00000021950.16	ENSMUST00000022519.15	1880	12	4625	5753	4581	-3170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAAGGGGGCTTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	33812562	33816775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33812659_33813757_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354_33816449_33816679
ENSMUSG00000021950.16_33813806_33819874_1	chr14	+	436	6	ISM	ENSMUSG00000021950.16	ENST00000611655.1	814	9	5845	71	5824	-71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCTTATCAAGGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	33813805	33819874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33813872_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813
ENSMUSG00000021950.16_33815383_33821711_1	chr14	+	528	7	ISM	ENSMUSG00000021950.16	ENSMUST00000022519.15	1880	12	7445	817	7401	-267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCAAAAAATAGAACAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	33815382	33821711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33815415_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813_33819937_33821647
ENSMUSG00000021950.16_33816678_33821978_1	chr14	+	611	4	ISM	ENSMUSG00000021950.16	ENSMUST00000120077.2	1208	12	8696	0	8696	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCAGTGTCCTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	33816677	33821978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33816776_33818486_33818546_33819813_33819937_33821647
ENSMUSG00000021950.16_33819897_33822168_1	chr14	+	561	2	ISM	ENSMUSG00000021950.16	ENSMUST00000120077.2	1208	12	11915	-190	11915	190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACCTCTATGAGAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	33819896	33822168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33819937_33821647
ENSMUSG00000021953.15_63731323_63733494_1	chr14	-	367	3	ISM	ENSMUSG00000021953.15	ENST00000525246.5	874	6	1597	1192	1597	-1192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGCCTGTCCATGAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	63733494	63731322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63731461_63733168_63733342_63733438
ENSMUSG00000021953.15_63731367_63733553_1	chr14	-	382	3	ISM	ENSMUSG00000021953.15	ENST00000525246.5	874	6	1538	1236	1538	-1236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCCTCAGGGCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	63733553	63731366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63731461_63733168_63733342_63733438
ENSMUSG00000021953.15_63731434_63733588_1	chr14	-	350	3	ISM	ENSMUSG00000021953.15	ENST00000525246.5	874	6	1503	1303	1503	-1303	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAAAGAACGGCACATTC	NA	NA	NA	NA	NA	NA	NA	NA	63733588	63731433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63731461_63733168_63733342_63733438
ENSMUSG00000021953.15_63733241_63735082_1	chr14	-	358	4	ISM	ENSMUSG00000021953.15	ENST00000525246.5	874	6	9	3110	9	-3110	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGATCTCTGTATTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	63735082	63733240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63733342_63733438_63733589_63734393_63734465_63735046
ENSMUSG00000021957.8_30271168_30292037_1	chr14	+	1295	9	ISM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	80	4640	80	-4640	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGGCTCCCACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	30271167	30292037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912
ENSMUSG00000021957.8_30271314_30292290_1	chr14	+	1312	10	ISM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	226	4387	226	-4387	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30271313	30292290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159
ENSMUSG00000021957.8_30280677_30293003_1	chr14	+	1373	10	ISM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	9589	3674	9589	-3674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGCCCTTCGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	30280676	30293003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919
ENSMUSG00000021957.8_30281647_30293208_1	chr14	+	1416	10	ISM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	10559	3469	10559	-3469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGGACCAGGGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	30281646	30293208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108
ENSMUSG00000021957.8_30282543_30294287_1	chr14	+	1358	10	ISM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	11455	2390	11455	-2390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGGGGCTGCACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	30282542	30294287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164
ENSMUSG00000021957.8_30287479_30295376_1	chr14	+	1308	10	ISM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	16391	1301	16391	-1301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGTGGCAAGCCAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	30287478	30295376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUSG00000021957.8_30287551_30295432_1	chr14	+	1292	10	ISM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	16463	1245	16463	-1245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCAAGCTGTGAAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	30287550	30295432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUSG00000021957.8_30287604_30295581_1	chr14	+	1388	10	ISM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	16516	1096	16516	-1096	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30287603	30295581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUSG00000021957.8_30290945_30295866_1	chr14	+	1314	7	ISM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	19857	811	19857	-811	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTCCTGCCTTATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	30290944	30295866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUSG00000021957.8_30291029_30295923_1	chr14	+	1287	7	ISM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	19941	754	19941	-754	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCCCACAACTCCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	30291028	30295923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUSG00000021957.8_30291083_30296005_1	chr14	+	1315	7	ISM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	19995	672	19995	-672	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGAGCTATGTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	30291082	30296005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUSG00000021957.8_30291966_30296059_1	chr14	+	1302	6	ISM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	20878	618	20878	-618	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTGGCCCGATCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	30291965	30296059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUSG00000021957.8_30292243_30296231_1	chr14	+	1287	5	ISM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	21155	446	21155	-446	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGCAAGCCATCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	30292242	30296231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUSG00000021957.8_30292918_30296352_1	chr14	+	1362	4	ISM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	21830	325	21830	-325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCACCACCTGGTGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	30292917	30296352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUSG00000021957.8_30294106_30296530_1	chr14	+	1419	2	ISM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	23018	147	23018	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTAGAAGGCATTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	30294105	30296530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30294288_30295293
ENSMUSG00000021962.10_30201636_30241051_1	chr14	+	689	6	ISM	ENSMUSG00000021962.10	ENST00000294241.10	1827	9	5	4396	5	-4396	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCTCAGTCTGAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	30201635	30241051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30240875
ENSMUSG00000021962.10_30201747_30241124_1	chr14	+	651	6	ISM	ENSMUSG00000021962.10	ENST00000294241.10	1827	9	116	4323	116	-4323	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGATCACTCCCGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	30201746	30241124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30240875
ENSMUSG00000021962.10_30224793_30241321_1	chr14	+	642	3	ISM	ENSMUSG00000021962.10	ENST00000294241.10	1827	9	23162	4126	23162	-4126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCCCTGAGCTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	30224792	30241321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30224850_30227502_30227642_30240875
ENSMUSG00000021962.10_30227503_30241427_1	chr14	+	691	2	ISM	ENSMUSG00000021962.10	ENST00000294241.10	1827	9	25872	4020	25872	-4020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTCAGAAACTCAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	30227502	30241427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30227642_30240875
ENSMUSG00000021962.10_30240974_30243566_1	chr14	+	681	2	ISM	ENSMUSG00000021962.10	ENST00000294241.10	1827	9	39343	1881	39343	-1881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGAAGTATTTTCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	30240973	30243566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30241635_30243546
ENSMUSG00000021963.18_58035675_58039999_1	chr14	+	991	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	38	4096	0	207	multi-exon	FALSE	canonical	NA	NA	NA	NA	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTTTTTTTCCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	58035674	58039999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
ENSMUSG00000021963.18_58035721_58040070_1	chr14	+	1016	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	84	4025	46	278	multi-exon	FALSE	canonical	NA	NA	NA	NA	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTGGCCTCGAACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	58035720	58040070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
ENSMUSG00000021963.18_58035721_58040106_1	chr14	+	1052	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	84	3989	46	314	multi-exon	FALSE	canonical	NA	NA	NA	NA	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGCTAAGAACACTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	58035720	58040106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
ENSMUSG00000021963.18_58036012_58039408_1	chr14	+	196	3	FSM	ENSMUSG00000021963.18	ENSMUST00000143600.2	521	3	129	196	-77	-196	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAGGGCACTGATGACT	NA	NA	NA	NA	NA	NA	NA	NA	58036011	58039408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_58036055_58038950_58039074_58039378
ENSMUSG00000021963.18_58036032_58040228_1	chr14	+	996	3	FSM	ENSMUSG00000021963.18	ENSMUST00000143600.2	521	3	149	-624	-57	436	multi-exon	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAATGAATCCAAACTAG	NA	NA	NA	NA	NA	NA	NA	NA	58036031	58040228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_58036055_58038950_58039074_58039378
ENSMUSG00000021965.4_58044125_58045500_1	chr14	-	933	2	ISM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	18120	107	18120	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATCAAGTGGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	58045500	58044124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58044989_58045431
ENSMUSG00000021965.4_58044250_58047477_1	chr14	-	921	3	ISM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	16143	232	16143	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGAGTTCAATTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	58047477	58044249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58044989_58045431_58045536_58047399
ENSMUSG00000021965.4_58044407_58049082_1	chr14	-	933	4	ISM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	14538	389	14538	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTCTTGAGTAGAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	58049082	58044406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036
ENSMUSG00000021965.4_58044523_58054166_1	chr14	-	922	5	ISM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	9454	505	9454	-505	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCAGTTGACTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	58054166	58044522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58054101
ENSMUSG00000021965.4_58044585_58054208_1	chr14	-	902	5	ISM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	9412	567	9412	-567	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGGGAATGAGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	58054208	58044584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58054101
ENSMUSG00000021965.4_58044927_58057888_1	chr14	-	838	6	ISM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	5732	909	5732	-909	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTCTCAGGATTATAACT	NA	NA	NA	NA	NA	NA	NA	NA	58057888	58044926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58054101_58054209_58057610
ENSMUSG00000021965.4_58045470_58059554_1	chr14	-	931	6	ISM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	4066	1452	4066	-1452	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACCCGAGGCGCTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	58059554	58045469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58045536_58047399_58047601_58049036_58049123_58054101_58054209_58057610_58058020_58059492
ENSMUSG00000021965.4_58047421_58060419_1	chr14	-	1010	6	ISM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	3201	3403	3201	-3403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAGAAGACATTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	58060419	58047420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58047601_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357
ENSMUSG00000021965.4_58047555_58063565_1	chr14	-	975	7	ISM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	55	3537	55	-3537	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGGAAATTAAAGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	58063565	58047554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58047601_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
ENSMUSG00000021967.5_58063691_58064699_1	chr14	+	823	2	FSM	ENSMUSG00000021967.5	ENSMUST00000022538.5	2877	2	0	2054	0	-2054	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTCTCACTATATA	NA	NA	NA	NA	NA	NA	NA	NA	58063690	58064699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_58063780_58063965
ENSMUSG00000021969.9_58073848_58075106_1	chr14	-	315	2	ISM	ENSMUSG00000021969.9	ENSMUST00000226057.2	2179	14	52573	699	52573	-699	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAACATGCCATATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	58075106	58073847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58074104_58075047
ENSMUSG00000021969.9_58074036_58078332_1	chr14	-	308	4	ISM	ENSMUSG00000021969.9	ENSMUST00000226057.2	2179	14	49347	887	49347	-887	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGAAGTGTAACAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	58078332	58074035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285
ENSMUSG00000021969.9_58076618_58084404_1	chr14	-	289	4	ISM	ENSMUSG00000021969.9	ENSMUST00000226057.2	2179	14	43275	3469	43275	-3469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCGCTTATTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	58084404	58076617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58076663_58078285_58078376_58080644_58080772_58084377
ENSMUSG00000021969.9_58080680_58094154_1	chr14	-	322	3	ISM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	33579	10520	33525	-7531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAATATTGGCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	58094154	58080679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58080772_58084377_58084520_58094066
ENSMUSG00000021969.9_58094130_58111378_1	chr14	-	311	5	ISM	ENSMUSG00000021969.9	ENSMUST00000226057.2	2179	14	16301	20981	16301	-20981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTACTATATTGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	58111378	58094129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349
ENSMUSG00000021972.15_65060728_65064238_1	chr14	-	602	4	ISM	ENSMUSG00000021972.15	ENST00000524238.3	1687	9	70337	96	70337	-96	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCAGGTATTTAGATAAC	NA	NA	NA	NA	NA	NA	NA	NA	65064238	65060727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_65061148_65062747_65062820_65063049_65063142_65064220
ENSMUSG00000021972.15_65061004_65089450_1	chr14	-	604	6	ISM	ENSMUSG00000021972.15	ENST00000524238.3	1687	9	45125	372	45125	-372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAAACAGTTAACTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	65089450	65061003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_65061148_65062747_65062820_65063049_65063142_65064220_65064317_65066034_65066118_65089333
ENSMUSG00000021972.15_65062755_65099075_1	chr14	-	601	6	ISM	ENSMUSG00000021972.15	ENST00000524238.3	1687	9	35500	2123	35500	33	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAGGTAGAAGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	65099075	65062754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_65062820_65063049_65063142_65064220_65064317_65066034_65066118_65089333_65089488_65098964
ENSMUSG00000021972.15_65063049_65125109_1	chr14	-	623	6	ISM	ENSMUSG00000021972.15	ENST00000524238.3	1687	9	9466	2417	9466	-261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCGGCTGGGCTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	65125109	65063048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_65063142_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023
ENSMUSG00000021973.10_58153718_58156438_1	chr14	-	1274	2	ISM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	80281	0	80281	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTCTCTCATCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	58156438	58153717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58154833_58156279
ENSMUSG00000021973.10_58153718_58156909_1	chr14	-	1382	3	ISM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	79810	0	79810	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTCTCTCATCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	58156909	58153717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58154833_58156279_58156438_58156800
ENSMUSG00000021973.10_58153912_58161517_1	chr14	-	1309	4	ISM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	75202	194	75202	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATATGGCACTATAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	58161517	58153911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396
ENSMUSG00000021973.10_58153981_58161550_1	chr14	-	1273	4	ISM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	75169	263	75169	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACAGATCACACACATAC	NA	NA	NA	NA	NA	NA	NA	NA	58161550	58153980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396
ENSMUSG00000021973.10_58154271_58191651_1	chr14	-	1355	9	ISM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	45068	553	45068	-553	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTAGGGAATACTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	58191651	58154270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592
ENSMUSG00000021973.10_58154445_58209153_1	chr14	-	1276	11	ISM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	27566	727	27566	-727	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGCTCCGACTCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	58209153	58154444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107
ENSMUSG00000021973.10_58154493_58209207_1	chr14	-	1282	11	ISM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	27512	775	27512	-775	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTCTCGAGCTTTGACA	NA	NA	NA	NA	NA	NA	NA	NA	58209207	58154492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107
ENSMUSG00000021973.10_58154505_58209209_1	chr14	-	1266	10	NNC	ENSMUSG00000021973.10	novel	2329	12	NA	NA	27510	-787	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGATTGAACTCAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	58209209	58154504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191691_58209103
ENSMUSG00000021973.10_58154598_58236540_1	chr14	-	1270	12	FSM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	179	880	179	-880	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGATGACGGGAGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	58236540	58154597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ENSMUSG00000021973.10_58154641_58236655_1	chr14	-	1342	12	FSM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	64	923	64	-923	multi-exon	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGAAGATGTGAAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	58236655	58154640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ENSMUSG00000021973.10_58154694_58236655_1	chr14	-	1289	12	FSM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	64	976	64	-976	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTTTTTCCAAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	58236655	58154693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ENSMUSG00000021975.10_65187494_65276781_1	chr14	+	2174	17	FSM	ENSMUSG00000021975.10	ENSMUST00000043914.8	2674	17	0	500	0	-500	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCGAGACACTCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	65187493	65276781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
ENSMUSG00000021975.10_65187622_65276833_1	chr14	+	2098	17	FSM	ENSMUSG00000021975.10	ENSMUST00000043914.8	2674	17	128	448	128	-448	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGACGAGACACTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	65187621	65276833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
ENSMUSG00000021975.10_65187751_65276905_1	chr14	+	2041	17	FSM	ENSMUSG00000021975.10	ENSMUST00000043914.8	2674	17	257	376	257	-376	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGACATCCTAGGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	65187750	65276905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
ENSMUSG00000021975.10_65217570_65277008_1	chr14	+	2079	16	ISM	ENSMUSG00000021975.10	ENSMUST00000043914.8	2674	17	30076	273	30076	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGCTGACCCCAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	65217569	65277008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
ENSMUSG00000021975.10_65217657_65277142_1	chr14	+	2126	16	ISM	ENSMUSG00000021975.10	ENSMUST00000043914.8	2674	17	30163	139	30163	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTCACAGGGGGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	65217656	65277142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
ENSMUSG00000021975.10_65230421_65277281_1	chr14	+	2101	13	ISM	ENSMUSG00000021975.10	ENSMUST00000043914.8	2674	17	42927	0	42927	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCAGTTCTATTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	65230420	65277281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
ENSMUSG00000021981.11_59716265_59743832_1	chr14	+	795	4	ISM	ENSMUSG00000021981.11	ENST00000355854.8	1720	9	67	41021	67	-41021	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTACCAGGTTTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	59716264	59743832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_59716634_59734251_59734394_59736992_59737158_59743713
ENSMUSG00000021981.11_59716265_59784556_1	chr14	+	1237	10	FSM	ENSMUSG00000021981.11	ENST00000610540.4	1601	10	67	297	67	-297	multi-exon	FALSE	canonical	NA	NA	NA	NA	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACGAGAAGAACTACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	59716264	59784556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_59716377_59716495_59716634_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ENSMUSG00000021981.11_59716265_59784659_1	chr14	+	1340	10	FSM	ENSMUSG00000021981.11	ENST00000610540.4	1601	10	67	194	67	-194	multi-exon	FALSE	canonical	NA	NA	NA	NA	3365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTGTTGTTTTAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	59716264	59784659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_59716377_59716495_59716634_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ENSMUSG00000021981.11_59716556_59784796_1	chr14	+	1305	9	FSM	ENSMUSG00000021981.11	ENST00000355854.8	1720	9	358	57	358	-57	multi-exon	FALSE	canonical	NA	NA	NA	NA	4028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGCCTGTGATTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	59716555	59784796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_59716634_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ENSMUSG00000021981.11_59776545_59785189_1	chr14	+	865	2	ISM	ENSMUSG00000021981.11	ENST00000355854.8	1720	9	60347	-336	60347	336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGGCTGTGACTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	59776544	59785189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_59776655_59784434
ENSMUSG00000021981.11_59776601_59785252_1	chr14	+	872	2	ISM	ENSMUSG00000021981.11	ENST00000355854.8	1720	9	60403	-399	60403	399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCACTTCTGCCGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	59776600	59785252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_59776655_59784434
ENSMUSG00000021982.15_59801954_59813208_1	chr14	-	368	4	ISM	ENSMUSG00000021982.15	ENSMUST00000056997.15	2202	10	22185	529	22077	-529	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTAACCCACATGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	59813208	59801953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_59802045_59806396_59806458_59811095_59811286_59813182
ENSMUSG00000021982.15_59805178_59834329_1	chr14	-	1623	9	ISM	ENSMUSG00000021982.15	ENSMUST00000171683.3	1892	10	1064	0	956	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGCTTCATAGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	59834329	59805177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_59805488_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310
ENSMUSG00000021982.15_59805348_59835285_1	chr14	-	1614	10	FSM	ENSMUSG00000021982.15	ENSMUST00000171683.3	1892	10	108	170	0	-170	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAGTCGAGGACAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	59835285	59805347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_59805488_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ENSMUSG00000021982.15_59805389_59835302_1	chr14	-	1590	10	FSM	ENSMUSG00000021982.15	ENSMUST00000171683.3	1892	10	91	211	-17	-211	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTCAGGAGGAGGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	59835302	59805388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_59805488_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ENSMUSG00000021982.15_59805454_59835384_1	chr14	-	1607	10	FSM	ENSMUSG00000021982.15	ENSMUST00000171683.3	1892	10	9	276	4	-276	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAGGCAAGCCACGGAA	NA	NA	NA	NA	NA	NA	NA	NA	59835384	59805453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_59805488_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ENSMUSG00000021987.10_60502677_60536490_1	chr14	+	1715	13	ISM	ENSMUSG00000021987.10	ENSMUST00000022563.9	3813	14	0	3329	0	-1480	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATTCTGAGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	60502676	60536490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_60502811_60514577_60514695_60517531_60517695_60519385_60519544_60522365_60522495_60526991_60527127_60529442_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363
ENSMUSG00000021987.10_60514622_60537849_1	chr14	+	1665	13	ISM	ENSMUSG00000021987.10	ENSMUST00000022563.9	3813	14	11945	1970	11835	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGCTATAGAGGGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	60514621	60537849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_60514695_60517531_60517695_60519385_60519544_60522365_60522495_60526991_60527127_60529442_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
ENSMUSG00000021987.10_60517531_60537970_1	chr14	+	1714	12	ISM	ENSMUSG00000021987.10	ENSMUST00000022563.9	3813	14	14854	1849	14744	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTTCCGTGATCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	60517530	60537970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_60517695_60519385_60519544_60522365_60522495_60526991_60527127_60529442_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
ENSMUSG00000021987.10_60519474_60538158_1	chr14	+	1650	11	ISM	ENSMUSG00000021987.10	ENSMUST00000022563.9	3813	14	16797	1661	16687	188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACATACTCATTTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	60519473	60538158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_60519544_60522365_60522495_60526991_60527127_60529442_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
ENSMUSG00000021987.10_60529453_60538527_1	chr14	+	1675	8	ISM	ENSMUSG00000021987.10	ENSMUST00000224366.2	1968	15	26666	-557	26666	557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAATCAGCCTTATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	60529452	60538527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
ENSMUSG00000021987.10_60529514_60538577_1	chr14	+	1664	8	ISM	ENSMUSG00000021987.10	ENSMUST00000224366.2	1968	15	26727	-607	26727	607	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGCCGCACACTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	60529513	60538577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
ENSMUSG00000021987.10_60530851_60538795_1	chr14	+	1692	6	ISM	ENSMUSG00000021987.10	ENSMUST00000224366.2	1968	15	28064	-825	28064	825	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTCTATTAATTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	60530850	60538795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
ENSMUSG00000021987.10_60534100_60539072_1	chr14	+	1734	4	ISM	ENSMUSG00000021987.10	ENSMUST00000022563.9	3813	14	31423	747	31313	-747	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAAGCAGCTTTGACGC	NA	NA	NA	NA	NA	NA	NA	NA	60534099	60539072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_60534224_60535511_60535644_60536363_60536491_60537721
ENSMUSG00000021987.10_60535592_60539190_1	chr14	+	1648	3	ISM	ENSMUSG00000021987.10	ENSMUST00000022563.9	3813	14	32915	629	32805	-629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGCTCTCAAAGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	60535591	60539190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_60535644_60536363_60536491_60537721
ENSMUSG00000021987.10_60536446_60539352_1	chr14	+	1676	2	ISM	ENSMUSG00000021987.10	ENSMUST00000022563.9	3813	14	33769	467	33659	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGAAAGCTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	60536445	60539352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_60536491_60537721
ENSMUSG00000021990.17_60970554_60998500_1	chr14	+	1586	9	FSM	ENSMUSG00000021990.17	ENST00000409126.5	1590	9	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTACCCAGGGCGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	60970553	60998500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_60970656_60983093_60983231_60984162_60984343_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
ENSMUSG00000021993.11_61022087_61046459_1	chr14	+	1030	8	ISM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	65	95219	13	9893	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGGTTAGTCTGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	61022086	61046459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_61022320_61024743_61024918_61025602_61025692_61028335_61028423_61033620_61033685_61039569_61039753_61040261_61040419_61046416
ENSMUSG00000021993.11_61039685_61080706_1	chr14	+	985	10	ISM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	17663	60972	17440	44140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGCAGCAGAAATGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	61039684	61080706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_61039753_61040261_61040419_61046416_61046466_61048547_61048609_61052401_61052455_61064747_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656
ENSMUSG00000021993.11_61040280_61083911_1	chr14	+	1003	10	ISM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	18258	57767	18035	47345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAGAGCAGTTCTATGGC	NA	NA	NA	NA	NA	NA	NA	NA	61040279	61083911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_61040419_61046416_61046466_61048547_61048609_61052401_61052455_61064747_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832
ENSMUSG00000021993.11_61046415_61109547_1	chr14	+	988	10	ISM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	24393	32131	24170	-32131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCTGGAAGGAGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	61046414	61109547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_61046466_61048547_61048609_61052401_61052455_61064747_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466
ENSMUSG00000021993.11_61064840_61140960_1	chr14	+	990	9	ISM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	42818	718	42595	-718	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGGAAAGCTCGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	61064839	61140960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
ENSMUSG00000021993.11_61066835_61141071_1	chr14	+	1040	8	ISM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	44813	607	44590	-607	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCTTGGCAATTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	61066834	61141071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
ENSMUSG00000021993.11_61068710_61141237_1	chr14	+	979	7	ISM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	46688	441	46465	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGTTAGGACAATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	61068709	61141237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
ENSMUSG00000021993.11_61083872_61141564_1	chr14	+	1025	4	ISM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	61850	114	61627	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATTGGCAGCTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	61083871	61141564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_61083953_61109466_61109589_61112682_61112757_61140816
ENSMUSG00000021993.11_61109486_61141678_1	chr14	+	1039	3	ISM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	87464	0	87241	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGTATCTGGTAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	61109485	61141678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_61109589_61112682_61112757_61140816
ENSMUSG00000021996.17_74969737_74987165_1	chr14	+	948	9	FSM	ENSMUSG00000021996.17	ENSMUST00000022573.17	1988	9	0	1040	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCCTCAGCCAAGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	74969736	74987165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
ENSMUSG00000021996.17_74979483_74987475_1	chr14	+	874	5	ISM	ENSMUSG00000021996.17	ENSMUST00000176957.8	1117	9	9659	-187	6076	187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTAGCTCTTCTTACTGC	NA	NA	NA	NA	NA	NA	NA	NA	74979482	74987475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
ENSMUSG00000021996.17_74980698_74987593_1	chr14	+	857	4	ISM	ENSMUSG00000021996.17	ENSMUST00000176957.8	1117	9	10874	-305	7291	305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCTGTGGCAGACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	74980697	74987593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_74980779_74982087_74982187_74982989_74983158_74987084
ENSMUSG00000021996.17_74982119_74987712_1	chr14	+	864	3	ISM	ENSMUSG00000021996.17	ENSMUST00000176957.8	1117	9	12295	-424	8712	424	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCTGAAAATAATGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	74982118	74987712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_74982187_74982989_74983158_74987084
ENSMUSG00000021996.17_74982173_74987760_1	chr14	+	858	3	ISM	ENSMUSG00000021996.17	ENSMUST00000176957.8	1117	9	12349	-472	8766	-445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTATCTTAGTTACATG	NA	NA	NA	NA	NA	NA	NA	NA	74982172	74987760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_74982187_74982989_74983158_74987084
ENSMUSG00000021996.17_74983029_74987814_1	chr14	+	863	2	ISM	ENSMUSG00000021996.17	ENSMUST00000177137.8	853	8	9622	-649	9622	-391	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGGTCTCTGTAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	74983028	74987814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_74983162_74987084
ENSMUSG00000021996.17_74983079_74987865_1	chr14	+	864	2	ISM	ENSMUSG00000021996.17	ENSMUST00000177137.8	853	8	9672	-700	9672	-340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTTTGAAACGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	74983078	74987865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_74983162_74987084
ENSMUSG00000021997.5_75344706_75366998_1	chr14	-	524	4	FSM	ENSMUSG00000021997.5	ENST00000676446.1	555	4	31	0	31	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGACACAGAACTAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	75366998	75344705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_75344862_75358426_75358526_75360375_75360537_75366890
ENSMUSG00000021997.5_75344706_75366998_2	chr14	-	518	4	NNC	ENSMUSG00000021997.5	novel	555	4	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGACACAGAACTAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	75366998	75344705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_75344862_75358426_75358526_75360375_75360529_75366888
ENSMUSG00000022003.8_75998311_76006352_1	chr14	-	2137	4	ISM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	18125	754	18125	-754	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTGTAGACCATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	76006352	75998310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255
ENSMUSG00000022003.8_75998811_76014490_1	chr14	-	2145	9	ISM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	9987	1254	9987	-1254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTTGAAATTAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	76014490	75998810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76014435
ENSMUSG00000022003.8_75998892_76014532_1	chr14	-	2106	9	ISM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	9945	1335	9945	-1335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGCCCCTTCCTCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	76014532	75998891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76014435
ENSMUSG00000022009.2_76348518_76363719_1	chr14	+	797	7	ISM	ENSMUSG00000022009.2	ENSMUST00000022586.2	3974	10	187	11100	187	-11100	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCCAAGGCTAATGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	76348517	76363719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_76348767_76349363_76349438_76351614_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577
ENSMUSG00000022009.2_76349379_76370510_1	chr14	+	801	8	ISM	ENSMUSG00000022009.2	ENSMUST00000022586.2	3974	10	1048	4309	1048	-4309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGTCTCAAGATCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	76349378	76370510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_76349438_76351614_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411
ENSMUSG00000022009.2_76351613_76377354_1	chr14	+	962	9	NNC	ENSMUSG00000022009.2	novel	968	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1002	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTTGGGGATACAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	76351612	76377354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_76351714_76352417_76352481_76353223_76353301_76361925_76362013_76363577_76363772_76368252_76368370_76370411_76370639_76372225_76372259_76377291
ENSMUSG00000022009.2_76351613_76377354_2	chr14	+	957	8	NNC	ENSMUSG00000022009.2	novel	968	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTTGGGGATACAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	76351612	76377354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411_76370661_76377291
ENSMUSG00000022009.2_76351613_76377354_4	chr14	+	968	9	FSM	ENSMUSG00000022009.2	ENST00000379161.5	968	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTTGGGGATACAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	76351612	76377354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411_76370639_76372225_76372259_76377291
ENSMUSG00000022009.2_76351613_76377354_5	chr14	+	962	8	NNC	ENSMUSG00000022009.2	novel	968	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTTGGGGATACAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	76351612	76377354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411_76370639_76377264
ENSMUSG00000022009.2_76363649_76372546_1	chr14	+	788	4	ISM	ENSMUSG00000022009.2	ENST00000379161.5	968	9	12036	4808	12036	-2273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGGTGGGAGGTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	76363648	76372546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_76363772_76368252_76368370_76370411_76370639_76372225
ENSMUSG00000022009.2_76363710_76372632_1	chr14	+	813	4	ISM	ENSMUSG00000022009.2	ENST00000379161.5	968	9	12097	4722	12097	-2187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCCAGAAGAGGGCATC	NA	NA	NA	NA	NA	NA	NA	NA	76363709	76372632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_76363772_76368252_76368370_76370411_76370639_76372225
ENSMUSG00000022009.2_76370554_76372925_1	chr14	+	785	2	ISM	ENSMUSG00000022009.2	ENST00000379161.5	968	9	18941	4429	18941	-1894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCACTGGTAGACAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	76370553	76372925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_76370639_76372225
ENSMUSG00000022010.20_76654860_76744821_1	chr14	+	428	2	NNC	ENSMUSG00000022010.20	novel	4818	3	NA	NA	1833	211	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAGCTTCTACACATTGA	NA	NA	NA	NA	NA	NA	NA	NA	76654859	76744821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_76655199_76744732
ENSMUSG00000022010.20_76654912_76744889_1	chr14	+	444	2	NNC	ENSMUSG00000022010.20	novel	4818	3	NA	NA	1885	279	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAGAGATCTACTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	76654911	76744889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_76655199_76744732
ENSMUSG00000022010.20_76654927_76744881_1	chr14	+	416	2	NNC	ENSMUSG00000022010.20	novel	2726	2	NA	NA	1900	271	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTCCTAGAGAGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	76654926	76744881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_76655193_76744731
ENSMUSG00000022010.20_76654951_76744922_1	chr14	+	443	2	NNC	ENSMUSG00000022010.20	novel	4818	3	NA	NA	1924	-280	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCACACCTGAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	76654950	76744922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_76655199_76744727
ENSMUSG00000022010.20_76654983_76744946_1	chr14	+	430	2	NNC	ENSMUSG00000022010.20	novel	4818	3	NA	NA	1956	-256	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTGGCCCAGTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	76654982	76744946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_76655199_76744732
ENSMUSG00000022010.20_76655021_76745013_1	chr14	+	454	2	NNC	ENSMUSG00000022010.20	novel	2726	2	NA	NA	1994	-189	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCGTGACCGATGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	76655020	76745013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_76655193_76744731
ENSMUSG00000022010.20_76655024_76744981_1	chr14	+	429	2	NNC	ENSMUSG00000022010.20	novel	4818	3	NA	NA	1997	-221	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATCTAGCTGCTGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	76655023	76744981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_76655199_76744727
ENSMUSG00000022010.20_76655087_76745053_1	chr14	+	438	2	NNC	ENSMUSG00000022010.20	novel	4818	3	NA	NA	2060	-149	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGTCAGTTGCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	76655086	76745053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_76655199_76744727
ENSMUSG00000022010.20_76655098_76745062_1	chr14	+	426	2	NNC	ENSMUSG00000022010.20	novel	2726	2	NA	NA	2071	-140	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTAAGGAAGTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	76655097	76745062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_76655193_76744731
ENSMUSG00000022010.20_76741654_76744610_1	chr14	+	883	3	FSM	ENSMUSG00000022010.20	ENSMUST00000177207.2	1476	3	0	593	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAAAACCGACAACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	76741653	76744610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_76741734_76742688_76742738_76743856
ENSMUSG00000022015.9_78516368_78521778_1	chr14	-	170	2	ISM	ENSMUSG00000022015.9	ENST00000398795.7	2072	4	23556	1483	23556	-1483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAACGGAAAACTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	78521778	78516367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_78516438_78521678
ENSMUSG00000022015.9_78521677_78537297_1	chr14	-	152	2	ISM	ENSMUSG00000022015.9	ENST00000398795.7	2072	4	8037	6792	8037	-6792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTACATTTCCACCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	78537297	78521676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_78521778_78537246
ENSMUSG00000022015.9_78537350_78545196_1	chr14	-	179	2	ISM	ENSMUSG00000022015.9	ENST00000398795.7	2072	4	138	22465	138	-22465	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAGAGTGAAGACACACT	NA	NA	NA	NA	NA	NA	NA	NA	78545196	78537349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_78537440_78545107
ENSMUSG00000022015.9_78537410_78545242_1	chr14	-	165	2	ISM	ENSMUSG00000022015.9	ENST00000398795.7	2072	4	92	22525	92	-22525	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCACTGCTTTTATAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	78545242	78537409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_78537440_78545107
ENSMUSG00000022019.17_87694517_87723135_1	chr14	+	770	7	ISM	ENSMUSG00000022019.17	ENSMUST00000169504.8	5280	12	40442	29067	47	-26072	internal_fragment	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGTAACGGGGAACGG	NA	NA	NA	NA	NA	NA	NA	NA	87694516	87723135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994
ENSMUSG00000022019.17_87709571_87723774_1	chr14	+	754	6	ISM	ENSMUSG00000022019.17	ENST00000196169.7	2073	11	15103	25433	15101	-25433	internal_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTAGAGGTATAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	87709570	87723774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627
ENSMUSG00000022019.17_87712192_87724723_1	chr14	+	731	6	ISM	ENSMUSG00000022019.17	ENST00000196169.7	2073	11	17724	24484	17722	-24484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGGCTAACCTGAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	87712191	87724723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597
ENSMUSG00000022019.17_87714826_87743304_1	chr14	+	756	6	ISM	ENSMUSG00000022019.17	ENST00000196169.7	2073	11	20358	5903	20356	-5903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGGCAGCCAAGAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	87714825	87743304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194
ENSMUSG00000022019.17_87722993_87743519_1	chr14	+	751	4	ISM	ENSMUSG00000022019.17	ENST00000621840.4	2072	11	28523	5688	28523	-5688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	879	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCACAACGATGGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	87722992	87743519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_87723136_87723627_87723785_87724597_87724724_87743194
ENSMUSG00000022019.17_87724636_87743780_1	chr14	+	674	2	ISM	ENSMUSG00000022019.17	ENST00000621840.4	2072	11	30166	5427	30166	-5427	internal_fragment	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGCAGAGCAATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	87724635	87743780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_87724724_87743194
ENSMUSG00000022019.17_87743444_87749155_1	chr14	+	674	2	ISM	ENSMUSG00000022019.17	ENST00000621840.4	2072	11	48974	52	48974	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAGAGGTGCTACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	87743443	87749155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_87744043_87749080
ENSMUSG00000022019.17_87743502_87749200_1	chr14	+	661	2	ISM	ENSMUSG00000022019.17	ENST00000621840.4	2072	11	49032	7	49032	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGGGTACGTGATCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	87743501	87749200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_87744043_87749080
ENSMUSG00000022019.17_87743596_87749207_1	chr14	+	574	2	ISM	ENSMUSG00000022019.17	ENST00000621840.4	2072	11	49126	0	49126	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTGATCCAAATTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	87743595	87749207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_87744043_87749080
ENSMUSG00000022023.7_79698811_79703707_1	chr14	-	844	2	ISM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	15253	1434	15253	-1434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCAAGGGTTGAAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	79703707	79698810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_79699570_79703622
ENSMUSG00000022023.7_79698881_79703748_1	chr14	-	815	2	ISM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	15212	1504	15212	-1504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTACTCCATTTAGGACG	NA	NA	NA	NA	NA	NA	NA	NA	79703748	79698880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_79699570_79703622
ENSMUSG00000022023.7_79698942_79703790_1	chr14	-	796	2	ISM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	15170	1565	15170	-1565	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAATGTGGTTTTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	79703790	79698941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_79699570_79703622
ENSMUSG00000022023.7_79699092_79707606_1	chr14	-	898	4	ISM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	11354	1715	11354	-1715	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGCTATGTATCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	79707606	79699091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544
ENSMUSG00000022023.7_79699255_79709812_1	chr14	-	817	6	ISM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	9148	1878	9148	-1878	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTGCATTTTACATTTA	NA	NA	NA	NA	NA	NA	NA	NA	79709812	79699254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791
ENSMUSG00000022023.7_79699308_79709860_1	chr14	-	812	6	ISM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	9100	1931	9100	-1931	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTGGAGAGGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	79709860	79699307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791
ENSMUSG00000022023.7_79699448_79714275_1	chr14	-	810	7	ISM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	4685	2071	4685	-2071	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGGAGTGGCCCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	79714275	79699447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242
ENSMUSG00000022023.7_79699508_79714320_1	chr14	-	795	7	ISM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	4640	2131	4640	-2131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGTTGGGGAAATCAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	79714320	79699507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242
ENSMUSG00000022023.7_79703764_79718408_1	chr14	-	818	9	ISM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	552	6387	552	-6387	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGGCCCAGAAATACAAA	NA	NA	NA	NA	NA	NA	NA	NA	79718408	79703763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ENSMUSG00000022023.7_79704821_79718543_1	chr14	-	819	8	ISM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	417	7444	417	-7444	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAGAAGACGCCAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	79718543	79704820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ENSMUSG00000022023.7_79707554_79718653_1	chr14	-	837	7	ISM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	307	10177	307	-10177	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGGAGGTGAGTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	79718653	79707553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ENSMUSG00000022023.7_79709887_79718859_1	chr14	-	834	5	ISM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	101	12510	101	-12510	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAGAAGAAGAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	79718859	79709886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ENSMUSG00000022023.7_79709937_79718960_1	chr14	-	885	5	ISM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	0	12560	0	-12560	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCACTGTCCAACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	79718960	79709936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ENSMUSG00000022024.11_79846396_79866416_1	chr14	+	603	5	ISM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	21265	6220	21265	-6220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCGTGTGTTCGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	79846395	79866416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ENSMUSG00000022024.11_79857147_79866554_1	chr14	+	538	3	ISM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	32016	6082	32016	-6082	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACATCTTATCATTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	79857146	79866554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_79857240_79862280_79862463_79866291
ENSMUSG00000022024.11_79857147_79866628_1	chr14	+	612	3	ISM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	32016	6008	32016	-6008	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCGCTCTGTCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	79857146	79866628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_79857240_79862280_79862463_79866291
ENSMUSG00000022024.11_79862342_79866747_1	chr14	+	577	2	ISM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	37211	5889	37211	-5889	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTTTTCAGCTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	79862341	79866747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_79862463_79866291
ENSMUSG00000022024.11_79862421_79866808_1	chr14	+	559	2	ISM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	37290	5828	37290	-5828	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTCTGTGAAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	79862420	79866808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_79862463_79866291
ENSMUSG00000022031.7_65768486_65785467_1	chr14	-	799	3	ISM	ENSMUSG00000022031.7	ENST00000537665.2	1506	12	38380	-444	38380	444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCGTGTCTTGAAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	65785467	65768485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_65769050_65784582_65784665_65785314
ENSMUSG00000022031.7_65768681_65788883_1	chr14	-	795	5	ISM	ENSMUSG00000022031.7	ENST00000537665.2	1506	12	34964	-249	34964	249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTCCTTTGGCCATCGT	NA	NA	NA	NA	NA	NA	NA	NA	65788883	65768680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833
ENSMUSG00000022031.7_65784639_65802824_1	chr14	-	796	7	ISM	ENSMUSG00000022031.7	ENST00000537665.2	1506	12	21023	15709	21023	-15709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGAGAGAATCGCTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	65802824	65784638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760
ENSMUSG00000022031.7_65785431_65815416_1	chr14	-	795	7	ISM	ENSMUSG00000022031.7	ENST00000537665.2	1506	12	8431	16501	8431	-16501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGAAACCTTCCGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	65815416	65785430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373
ENSMUSG00000022031.7_65785487_65815469_1	chr14	-	792	7	ISM	ENSMUSG00000022031.7	ENST00000537665.2	1506	12	8378	16557	8378	-16557	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACGAAGATCCTGATCAGG	NA	NA	NA	NA	NA	NA	NA	NA	65815469	65785486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373
ENSMUSG00000022031.7_65788864_65819612_1	chr14	-	817	7	ISM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	10889	20966	4235	-19934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCAAGAATGAAGGATCT	NA	NA	NA	NA	NA	NA	NA	NA	65819612	65788863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563
ENSMUSG00000022031.7_65797570_65820409_1	chr14	-	842	7	ISM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	10092	29672	3438	-28640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGACCTTTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	65820409	65797569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338
ENSMUSG00000022031.7_65797671_65823773_1	chr14	-	808	8	ISM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	6728	29773	74	-28741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGAAGGTACAGGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	65823773	65797670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706
ENSMUSG00000022031.7_65797718_65823829_1	chr14	-	817	8	ISM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	6672	29820	18	-28788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAACCCTGGTTATCCGT	NA	NA	NA	NA	NA	NA	NA	NA	65823829	65797717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706
ENSMUSG00000022031.7_65800746_65828026_1	chr14	-	814	8	ISM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	2475	32848	2475	-31816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGCCGAACGTGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	65828026	65800745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954
ENSMUSG00000022031.7_65802837_65830499_1	chr14	-	810	8	ISM	ENSMUSG00000022031.7	ENSMUST00000022609.7	2851	15	25	34939	2	-33907	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACTTATGGCTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	65830499	65802836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830373
ENSMUSG00000022031.7_65815391_65823735_1	chr14	-	307	4	ISM	ENSMUSG00000022031.7	ENST00000537665.2	1506	12	112	46461	112	-46461	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCACGAGGCAATCAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	65823735	65815390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_65815529_65818196_65818266_65820338_65820410_65823706
ENSMUSG00000022031.7_65815437_65823806_1	chr14	-	332	4	ISM	ENSMUSG00000022031.7	ENST00000537665.2	1506	12	41	46507	41	-46507	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCGAAGTTTACACGATG	NA	NA	NA	NA	NA	NA	NA	NA	65823806	65815436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_65815529_65818196_65818266_65820338_65820410_65823706
ENSMUSG00000022033.10_66043386_66052664_1	chr14	+	724	6	ISM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	100	2607	100	-2607	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAATGTTGTAATTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	66043385	66052664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66043584_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620
ENSMUSG00000022033.10_66043386_66052725_1	chr14	+	785	6	ISM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	100	2546	100	-2546	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCCATTGGATGAAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	66043385	66052725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66043584_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620
ENSMUSG00000022033.10_66043535_66054104_1	chr14	+	717	7	ISM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	249	1167	249	-1167	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGAAGAAAATGGCATCAT	NA	NA	NA	NA	NA	NA	NA	NA	66043534	66054104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66043584_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048
ENSMUSG00000022033.10_66049379_66054681_1	chr14	+	758	6	ISM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	6093	590	6093	-590	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTCTGGGGACAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	66049378	66054681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048_66054226_66054638
ENSMUSG00000022033.10_66051260_66054854_1	chr14	+	689	4	ISM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	7974	417	7974	-417	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATTAACTTGTATGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	66051259	66054854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66051426_66052620_66052751_66054048_66054226_66054638
ENSMUSG00000022033.10_66051303_66054913_1	chr14	+	705	4	ISM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	8017	358	8017	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGATTCTAGAAGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	66051302	66054913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66051426_66052620_66052751_66054048_66054226_66054638
ENSMUSG00000022033.10_66051350_66054976_1	chr14	+	721	4	ISM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	8064	295	8064	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATTGCTTTGTTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	66051349	66054976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66051426_66052620_66052751_66054048_66054226_66054638
ENSMUSG00000022033.10_66052696_66055130_1	chr14	+	724	3	ISM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	9410	141	9410	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATAAACGTAGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	66052695	66055130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66052751_66054048_66054226_66054638
ENSMUSG00000022033.10_66054048_66055271_1	chr14	+	811	2	ISM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	10762	0	10762	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCATTATCTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66054047	66055271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66054226_66054638
ENSMUSG00000022034.11_66056895_66061635_1	chr14	-	883	3	ISM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	9808	408	9808	-408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTATCTGATTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	66061635	66056894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_66057548_66059029_66059191_66061566
ENSMUSG00000022034.11_66057396_66067183_1	chr14	-	925	8	ISM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	4260	909	4260	-909	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTACTATGTGGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	66067183	66057395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110
ENSMUSG00000022034.11_66059081_66068631_1	chr14	-	918	8	ISM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	2812	2594	2812	-2594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGACTAAAAAGAAGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	66068631	66059080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453
ENSMUSG00000022034.11_66061629_66068839_1	chr14	-	954	7	ISM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	2604	5142	2604	-5142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCTCTTTATTGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	66068839	66061628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453
ENSMUSG00000022034.11_66067130_66070167_1	chr14	-	917	3	ISM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	1276	10643	1276	-10643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGATGAGAACAAGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	66070167	66067129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_66067202_66068453_66069244_66070112
ENSMUSG00000022034.11_66068500_66071363_1	chr14	-	935	3	ISM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	80	12013	80	-12013	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGTACAGAATGCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	66071363	66068499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_66069244_66070112_66070191_66071250
ENSMUSG00000022035.7_66074909_66094346_1	chr14	+	497	6	FSM	ENSMUSG00000022035.7	ENST00000497982.2	500	6	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCTGGGGAGGAGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	66074908	66094346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_66074934_66077896_66077945_66083744_66083785_66091550_66091627_66093872_66093977_66094142
ENSMUSG00000022035.7_66077896_66094346_1	chr14	+	471	5	NNC	ENSMUSG00000022035.7	novel	500	6	NA	NA	2990	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCTGGGGAGGAGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	66077895	66094346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_66077945_66083744_66083785_66091550_66091627_66093872_66093981_66094148
ENSMUSG00000022035.7_66089088_66102620_1	chr14	+	501	6	ISM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	14337	1436	14182	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTGGGAAGACATGAATG	NA	NA	NA	NA	NA	NA	NA	NA	66089087	66102620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
ENSMUSG00000022035.7_66093871_66094215_1	chr14	+	179	2	ISM	ENSMUSG00000022035.7	ENST00000497982.2	500	6	18965	131	18965	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGACCTTGCAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	66093870	66094215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66093977_66094142
ENSMUSG00000022035.7_66093912_66102777_1	chr14	+	513	4	ISM	ENSMUSG00000022035.7	ENST00000522915.5	692	7	19011	-9	19006	9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAACATATGTATAATATA	NA	NA	NA	NA	NA	NA	NA	NA	66093911	66102777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66093977_66094142_66094346_66097618_66097665_66102578
ENSMUSG00000022035.7_66094328_66102703_1	chr14	+	189	3	ISM	ENSMUSG00000022035.7	ENST00000522915.5	692	7	19427	65	19422	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTACCTTCATTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	66094327	66102703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66094346_66097618_66097665_66102578
ENSMUSG00000022039.7_66291318_66306070_1	chr14	-	493	5	ISM	ENSMUSG00000022039.7	ENST00000347580.8	707	6	638	84	638	-84	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGCCTCAGCATGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	66306070	66291317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_66291368_66293916_66293999_66295016_66295184_66296197_66296270_66305948
ENSMUSG00000022039.7_66295052_66306678_1	chr14	-	426	4	ISM	ENSMUSG00000022039.7	ENST00000347580.8	707	6	30	3818	30	-3818	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGCGACCACATGATAT	NA	NA	NA	NA	NA	NA	NA	NA	66306678	66295051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_66295184_66296197_66296270_66305948_66306118_66306625
ENSMUSG00000022040.9_66322379_66330361_1	chr14	-	518	6	ISM	ENSMUSG00000022040.9	ENST00000517536.5	836	10	9338	0	9338	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGAGACTGGGGTCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	66330361	66322378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_66322439_66322744_66322826_66323682_66323753_66324413_66324532_66326954_66327030_66330247
ENSMUSG00000022040.9_66322745_66332272_1	chr14	-	542	6	ISM	ENSMUSG00000022040.9	ENST00000517536.5	836	10	7427	366	7427	-366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGCCTGACCCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	66332272	66322744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_66322826_66323682_66323753_66324413_66324532_66326954_66327030_66330247_66330360_66332186
ENSMUSG00000022040.9_66323683_66336288_1	chr14	-	513	6	ISM	ENSMUSG00000022040.9	ENST00000517536.5	836	10	3411	1304	3411	-1304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAACTGTGACCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	66336288	66323682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_66323753_66324413_66324532_66326954_66327030_66330247_66330360_66332186_66332273_66336236
ENSMUSG00000022040.9_66324482_66339629_1	chr14	-	487	7	ISM	ENSMUSG00000022040.9	ENST00000517536.5	836	10	70	2103	70	-2103	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGCAAAATTACTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	66339629	66324481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_66324532_66326954_66327030_66330247_66330360_66332186_66332273_66336236_66336288_66339041_66339121_66339595
ENSMUSG00000022041.11_66380872_66388616_1	chr14	+	1430	4	NNC	ENSMUSG00000022041.11	novel	1432	5	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCCACCTGCCTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	66380871	66388616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_66380913_66383825_66383965_66386235_66387269_66388399
ENSMUSG00000022041.11_66380872_66388616_2	chr14	+	1436	4	NNC	ENSMUSG00000022041.11	novel	1933	7	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCCACCTGCCTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	66380871	66388616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_66380919_66383825_66383965_66386235_66387269_66388399
ENSMUSG00000022041.11_66380872_66388616_3	chr14	+	1440	5	NNC	ENSMUSG00000022041.11	novel	1432	5	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCCACCTGCCTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	66380871	66388616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_66380913_66381369_66381415_66383854_66383965_66386235_66387269_66388405
ENSMUSG00000022041.11_66380872_66388616_4	chr14	+	1440	5	NNC	ENSMUSG00000022041.11	novel	1432	5	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCCACCTGCCTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	66380871	66388616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_66380913_66381375_66381415_66383854_66383965_66386235_66387269_66388399
ENSMUSG00000022041.11_66380872_66388616_5	chr14	+	1445	5	NNC	ENSMUSG00000022041.11	novel	1432	5	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCCACCTGCCTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	66380871	66388616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_66380913_66381369_66381415_66383854_66383965_66386236_66387269_66388399
ENSMUSG00000022041.11_66380872_66388616_6	chr14	+	1446	5	FSM	ENSMUSG00000022041.11	ENST00000240132.7	1432	5	53	-67	53	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCCACCTGCCTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	66380871	66388616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_66380913_66381369_66381415_66383854_66383965_66386235_66387269_66388399
ENSMUSG00000022041.11_66383850_66388616_1	chr14	+	1360	3	NNC	ENSMUSG00000022041.11	novel	1933	7	NA	NA	3031	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCCACCTGCCTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	66383849	66388616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_66383965_66386240_66387269_66388399
ENSMUSG00000022041.11_66383850_66388616_2	chr14	+	1363	3	NNC	ENSMUSG00000022041.11	novel	1933	7	NA	NA	3031	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCCACCTGCCTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	66383849	66388616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_66383965_66386235_66387273_66388405
ENSMUSG00000022043.20_66534539_66547708_1	chr14	+	2447	5	NNC	ENSMUSG00000022043.20	novel	3678	6	NA	NA	-43	1076	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCCTGTCCTTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	66534538	66547708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_66534999_66540629_66540726_66541453_66541701_66545260_66545380_66546183
ENSMUSG00000022043.20_66534539_66547777_1	chr14	+	2523	6	FSM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	59	1096	-43	-1096	multi-exon	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAGTCATGCCTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	66534538	66547777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66545260_66545380_66546183
ENSMUSG00000022043.20_66534790_66547934_1	chr14	+	2429	6	FSM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	310	939	208	-939	multi-exon	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTAAACCACGCCGATTA	NA	NA	NA	NA	NA	NA	NA	NA	66534789	66547934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66545260_66545380_66546183
ENSMUSG00000022043.20_66534803_66541592_1	chr14	+	335	2	ISM	ENSMUSG00000022043.20	ENST00000521253.1	1216	4	221	5040	221	-5040	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGCAGCTAGCAGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	66534802	66541592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66534999_66541453
ENSMUSG00000022043.20_66534836_66547978_1	chr14	+	2420	5	NNC	ENSMUSG00000022043.20	novel	3678	6	NA	NA	254	-895	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGCACTTGTGGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	66534835	66547978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_66534999_66540629_66540726_66541453_66541701_66545260_66545380_66546183
ENSMUSG00000022043.20_66534897_66548043_1	chr14	+	2424	5	NNC	ENSMUSG00000022043.20	novel	3678	6	NA	NA	315	-830	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAGGGACAGTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	66534896	66548043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_66534999_66540629_66540726_66541453_66541701_66545260_66545380_66546183
ENSMUSG00000022043.20_66534900_66548081_1	chr14	+	2466	6	FSM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	420	792	318	-792	multi-exon	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGCTTGGGCACCACGG	NA	NA	NA	NA	NA	NA	NA	NA	66534899	66548081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66545260_66545380_66546183
ENSMUSG00000022043.20_66534939_66545320_1	chr14	+	351	3	ISM	ENSMUSG00000022043.20	ENST00000521253.1	1216	4	357	1312	357	-1312	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGGAGTCCCTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	66534938	66545320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66534999_66541453_66541685_66545260
ENSMUSG00000022043.20_66540683_66548188_1	chr14	+	2414	4	NNC	ENSMUSG00000022043.20	novel	3678	6	NA	NA	6101	-685	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTTTTAATTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	66540682	66548188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_66540726_66541453_66541701_66545260_66545380_66546183
ENSMUSG00000022043.20_66540683_66548188_2	chr14	+	2421	5	ISM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	6203	685	6101	-685	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTTTTAATTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	66540682	66548188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66540726_66541453_66541685_66544474_66544498_66545260_66545380_66546183
ENSMUSG00000022043.20_66541548_66548339_1	chr14	+	2435	4	ISM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	7068	534	6966	-534	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCATTGTAAGATTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	66541547	66548339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66541685_66544474_66544498_66545260_66545380_66546183
ENSMUSG00000022043.20_66541607_66546313_1	chr14	+	327	3	ISM	ENSMUSG00000022043.20	ENST00000521253.1	1216	4	7025	319	7025	-319	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGGCTCTCAAGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	66541606	66546313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66541685_66545260_66545380_66546183
ENSMUSG00000022043.20_66544479_66548475_1	chr14	+	2430	3	ISM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	9999	398	9897	-398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTCTTGATTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	66544478	66548475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_66544498_66545260_66545380_66546183
ENSMUSG00000022048.9_67041879_67044440_1	chr14	-	1084	2	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	61697	1566	61697	-1566	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATAGTTTTGTGCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	67044440	67041878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67042886_67044363
ENSMUSG00000022048.9_67041934_67044487_1	chr14	-	1076	2	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	61650	1621	61650	-1621	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACCCAGTTTGGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	67044487	67041933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67042886_67044363
ENSMUSG00000022048.9_67042044_67045413_1	chr14	-	1111	3	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	60724	1731	60724	-1731	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTAGATGTTGGTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	67045413	67042043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67042886_67044363_67044530_67045310
ENSMUSG00000022048.9_67042217_67050641_1	chr14	-	1082	4	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	55496	1904	55496	-1904	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAAAGGTTCCATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	67050641	67042216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67042886_67044363_67044530_67045310_67045491_67050574
ENSMUSG00000022048.9_67042350_67052419_1	chr14	-	1069	5	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	53718	2037	53718	-2037	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTTTTTTTTTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	67052419	67042349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67042886_67044363_67044530_67045310_67045491_67050574_67050746_67052403
ENSMUSG00000022048.9_67042475_67052907_1	chr14	-	1098	6	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	53230	2162	53230	-2162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTAGCACCTTCCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	67052907	67042474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67042886_67044363_67044530_67045310_67045491_67050574_67050746_67052403_67052546_67052879
ENSMUSG00000022048.9_67042616_67061814_1	chr14	-	1107	7	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	44323	2303	44323	-2303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCACCCAAGTCCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	67061814	67042615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67042886_67044363_67044530_67045310_67045491_67050574_67050746_67052403_67052546_67052879_67053037_67061793
ENSMUSG00000022048.9_67042829_67066842_1	chr14	-	1095	9	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	39295	2516	39295	-2516	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGGCCGTGCCAACATC	NA	NA	NA	NA	NA	NA	NA	NA	67066842	67042828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67042886_67044363_67044530_67045310_67045491_67050574_67050746_67052403_67052546_67052879_67053037_67061793_67061915_67066219_67066289_67066810
ENSMUSG00000022048.9_67044362_67067431_1	chr14	-	1151	9	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	38706	4049	38706	-4049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCAGGGGGTGGGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	67067431	67044361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67044530_67045310_67045491_67050574_67050746_67052403_67052546_67052879_67053037_67061793_67061915_67066219_67066289_67066810_67066892_67067369
ENSMUSG00000022048.9_67045311_67071825_1	chr14	-	1148	9	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	34312	4998	34312	-4998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCTTGCAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	67071825	67045310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67045491_67050574_67050746_67052403_67052546_67052879_67053037_67061793_67061915_67066219_67066289_67066810_67066892_67067369_67067432_67071660
ENSMUSG00000022048.9_67045426_67099993_1	chr14	-	1105	10	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	6144	5113	6144	-5113	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAAGATTGTCCTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	67099993	67045425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67045491_67050574_67050746_67052403_67052546_67052879_67053037_67061793_67061915_67066219_67066289_67066810_67066892_67067369_67067432_67071660_67071826_67099921
ENSMUSG00000022048.9_67050574_67100106_1	chr14	-	1154	9	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	6031	10261	6031	-10261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTTGCCTGTCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	67100106	67050573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67050746_67052403_67052546_67052879_67053037_67061793_67061915_67066219_67066289_67066810_67066892_67067369_67067432_67071660_67071826_67099921
ENSMUSG00000022048.9_67050700_67102567_1	chr14	-	1065	10	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	3570	10387	3570	-10387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACGCAGCCAAAGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	67102567	67050699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67050746_67052403_67052546_67052879_67053037_67061793_67061915_67066219_67066289_67066810_67066892_67067369_67067432_67071660_67071826_67099921_67100107_67102530
ENSMUSG00000022048.9_67052406_67105801_1	chr14	-	1092	10	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	336	12093	336	-12093	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAAGGACTGATGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	67105801	67052405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67052546_67052879_67053037_67061793_67061915_67066219_67066289_67066810_67066892_67067369_67067432_67071660_67071826_67099921_67100107_67102530_67102620_67105778
ENSMUSG00000022048.9_67052522_67105907_1	chr14	-	1082	10	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	230	12209	230	-12209	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCACTGCACCTTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	67105907	67052521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67052546_67052879_67053037_67061793_67061915_67066219_67066289_67066810_67066892_67067369_67067432_67071660_67071826_67099921_67100107_67102530_67102620_67105778
ENSMUSG00000022048.9_67052959_67106028_1	chr14	-	1100	9	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	109	12646	109	-12646	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGCGGCCTTTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	67106028	67052958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67053037_67061793_67061915_67066219_67066289_67066810_67066892_67067369_67067432_67071660_67071826_67099921_67100107_67102530_67102620_67105778
ENSMUSG00000022048.9_67061820_67106137_1	chr14	-	1105	8	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	0	21507	0	-21507	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATCGCTCAGGCACGGA	NA	NA	NA	NA	NA	NA	NA	NA	67106137	67061819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67061915_67066219_67066289_67066810_67066892_67067369_67067432_67071660_67071826_67099921_67100107_67102530_67102620_67105778
ENSMUSG00000022051.16_67222891_67226738_1	chr14	-	2489	2	ISM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	19588	203	19567	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACAGAGAACAGCACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	67226738	67222890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67225225_67226583
ENSMUSG00000022051.16_67222891_67226738_2	chr14	-	2486	2	NNC	ENSMUSG00000022051.16	novel	3238	6	NA	NA	19567	-203	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACAGAGAACAGCACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	67226738	67222890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_67225227_67226588
ENSMUSG00000022051.16_67223104_67231398_1	chr14	-	2448	4	ISM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	14928	416	14907	-416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGCTCCAACATGCGG	NA	NA	NA	NA	NA	NA	NA	NA	67231398	67223103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325
ENSMUSG00000022051.16_67223423_67246305_1	chr14	-	2475	6	NNC	ENSMUSG00000022051.16	novel	3259	7	NA	NA	0	-735	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGCTGTAGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	67246305	67223422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_67225225_67226583_67226734_67226854_67226952_67231325_67231399_67236969_67237154_67246136
ENSMUSG00000022051.16_67223423_67246305_2	chr14	-	2482	6	FSM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	21	735	0	-735	multi-exon	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGCTGTAGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	67246305	67223422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
ENSMUSG00000022052.10_67253244_67257259_1	chr14	-	954	2	ISM	ENSMUSG00000022052.10	ENST00000665949.1	2087	11	50500	-1	50500	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGGAATATGTTACGAAC	NA	NA	NA	NA	NA	NA	NA	NA	67257259	67253243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67254103_67257164
ENSMUSG00000022052.10_67253244_67259892_1	chr14	-	1121	3	ISM	ENSMUSG00000022052.10	ENST00000665949.1	2087	11	47867	-1	47867	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGGAATATGTTACGAAC	NA	NA	NA	NA	NA	NA	NA	NA	67259892	67253243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67254103_67257164_67257257_67259722
ENSMUSG00000022052.10_67253388_67259892_1	chr14	-	977	3	ISM	ENSMUSG00000022052.10	ENST00000665949.1	2087	11	47867	143	47867	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTAGCATTCCTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	67259892	67253387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67254103_67257164_67257257_67259722
ENSMUSG00000022052.10_67253613_67261163_1	chr14	-	999	5	ISM	ENSMUSG00000022052.10	ENST00000665949.1	2087	11	46596	368	46596	-368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACTTTTAATTTAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	67261163	67253612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081
ENSMUSG00000022052.10_67253754_67262108_1	chr14	-	1086	6	ISM	ENSMUSG00000022052.10	ENST00000665949.1	2087	11	45651	509	45651	-509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGCGGTCCATTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	67262108	67253753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976
ENSMUSG00000022052.10_67253984_67266376_1	chr14	-	1000	8	ISM	ENSMUSG00000022052.10	ENST00000665949.1	2087	11	41383	739	41383	-739	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGTCTGTGCAAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	67266376	67253983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67263274_67263375_67266313
ENSMUSG00000022052.10_67254036_67266426_1	chr14	-	998	8	ISM	ENSMUSG00000022052.10	ENST00000665949.1	2087	11	41333	791	41333	-791	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTAGAAGCATCACGAGA	NA	NA	NA	NA	NA	NA	NA	NA	67266426	67254035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67263274_67263375_67266313
ENSMUSG00000022052.10_67257165_67275459_1	chr14	-	1057	8	ISM	ENSMUSG00000022052.10	ENST00000665949.1	2087	11	32300	3920	32300	-3920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGGAAAGAAACTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	67275459	67257164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67263274_67263375_67266313_67266480_67275386
ENSMUSG00000022052.10_67257202_67266383_1	chr14	-	751	6	ISM	ENSMUSG00000022052.10	ENSMUST00000225380.2	1988	10	43501	5079	41376	-3957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACAAATTTGAATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	67266383	67257201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313
ENSMUSG00000022052.10_67259813_67307721_1	chr14	-	1009	9	ISM	ENSMUSG00000022052.10	ENST00000665949.1	2087	11	38	6568	38	-6568	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGCGGTCGTTATATGAT	NA	NA	NA	NA	NA	NA	NA	NA	67307721	67259812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67263274_67263375_67266313_67266480_67275386_67275458_67276323_67276422_67307683
ENSMUSG00000022052.10_67259827_67276384_1	chr14	-	749	6	ISM	ENSMUSG00000022052.10	ENSMUST00000225380.2	1988	10	33500	7704	31375	-6582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAAAATTCAGCCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	67276384	67259826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323
ENSMUSG00000022052.10_67260475_67307758_1	chr14	-	795	6	ISM	ENSMUSG00000022052.10	ENSMUST00000225380.2	1988	10	2126	8352	1	-7230	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCCATTTCTGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	67307758	67260474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683
ENSMUSG00000022052.10_67260607_67309631_1	chr14	-	756	7	ISM	ENSMUSG00000022052.10	ENSMUST00000225380.2	1988	10	253	8484	253	-7362	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCACGGAGGTGATCACG	NA	NA	NA	NA	NA	NA	NA	NA	67309631	67260606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ENSMUSG00000022052.10_67261170_67309755_1	chr14	-	759	6	ISM	ENSMUSG00000022052.10	ENSMUST00000225380.2	1988	10	129	9047	129	-7925	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATCAATAGTGATTATGA	NA	NA	NA	NA	NA	NA	NA	NA	67309755	67261169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ENSMUSG00000022052.10_67261230_67309884_1	chr14	-	828	6	ISM	ENSMUSG00000022052.10	ENSMUST00000225380.2	1988	10	0	9107	0	-7985	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAGCCAGTCCACGGAG	NA	NA	NA	NA	NA	NA	NA	NA	67309884	67261229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ENSMUSG00000022056.10_68747115_68752317_1	chr14	-	682	5	ISM	ENSMUSG00000022056.10	ENST00000520720.1	1182	9	7103	-2	7103	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAAGCTCTGTGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	68752317	68747114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_68747306_68748195_68748293_68748686_68748893_68750065_68750156_68752219
ENSMUSG00000022056.10_68747223_68754083_1	chr14	-	725	6	ISM	ENSMUSG00000022056.10	ENST00000520720.1	1182	9	5337	106	5337	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGAAGCAGAACGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	68754083	68747222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_68747306_68748195_68748293_68748686_68748893_68750065_68750156_68752219_68752395_68754009
ENSMUSG00000022056.10_68747290_68754120_1	chr14	-	695	6	ISM	ENSMUSG00000022056.10	ENST00000520720.1	1182	9	5300	173	5300	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATACTGCTCGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	68754120	68747289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_68747306_68748195_68748293_68748686_68748893_68750065_68750156_68752219_68752395_68754009
ENSMUSG00000022056.10_68748762_68757915_1	chr14	-	679	6	ISM	ENSMUSG00000022056.10	ENST00000520720.1	1182	9	1505	1645	1505	-1645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTACTGCTTTATGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	68757915	68748761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_68748893_68750065_68750156_68752219_68752395_68754009_68754138_68755893_68755979_68757845
ENSMUSG00000022056.10_68748863_68758020_1	chr14	-	683	6	ISM	ENSMUSG00000022056.10	ENST00000520720.1	1182	9	1400	1746	1400	-1746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGAAAAATGAATGCGATAT	NA	NA	NA	NA	NA	NA	NA	NA	68758020	68748862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_68748893_68750065_68750156_68752219_68752395_68754009_68754138_68755893_68755979_68757845
ENSMUSG00000022056.10_68750074_68759418_1	chr14	-	680	6	ISM	ENSMUSG00000022056.10	ENST00000520720.1	1182	9	2	2957	2	-2957	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCAGGTGAGACTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	68759418	68750073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_68750156_68752219_68752395_68754009_68754138_68755893_68755979_68757845_68758016_68759378
ENSMUSG00000022057.9_68806159_68810714_1	chr14	-	875	7	ISM	ENSMUSG00000022057.9	ENSMUST00000022641.9	2442	14	8830	5330	8815	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	895	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAAATACACGAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	68810714	68806158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_68806335_68807519_68807651_68808340_68808423_68808780_68808948_68809201_68809274_68810274_68810335_68810527
ENSMUSG00000022057.9_68806297_68815357_1	chr14	-	872	9	ISM	ENSMUSG00000022057.9	ENSMUST00000022641.9	2442	14	4187	5468	4172	-138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCAAGGGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	68815357	68806296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_68806335_68807519_68807651_68808340_68808423_68808780_68808948_68809201_68809274_68810274_68810335_68810527_68810715_68814535_68814613_68815299
ENSMUSG00000022057.9_68807520_68816679_1	chr14	-	932	9	ISM	ENSMUSG00000022057.9	ENSMUST00000022641.9	2442	14	2865	6691	2850	-1361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	947	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATGGTATCATCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	68816679	68807519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_68807651_68808340_68808423_68808780_68808948_68809201_68809274_68810274_68810335_68810527_68810715_68814535_68814613_68815299_68815379_68816602
ENSMUSG00000022057.9_68807632_68818011_1	chr14	-	846	10	ISM	ENSMUSG00000022057.9	ENSMUST00000022641.9	2442	14	1533	6803	1518	-1473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCTTGTTGCACTGATG	NA	NA	NA	NA	NA	NA	NA	NA	68818011	68807631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_68807651_68808340_68808423_68808780_68808948_68809201_68809274_68810274_68810335_68810527_68810715_68814535_68814613_68815299_68815379_68816602_68816680_68817985
ENSMUSG00000022057.9_68808340_68818104_1	chr14	-	921	9	ISM	ENSMUSG00000022057.9	ENSMUST00000022641.9	2442	14	1440	7511	1425	-2181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTATACTTCTATTAACA	NA	NA	NA	NA	NA	NA	NA	NA	68818104	68808339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_68808423_68808780_68808948_68809201_68809274_68810274_68810335_68810527_68810715_68814535_68814613_68815299_68815379_68816602_68816680_68817985
ENSMUSG00000022057.9_68808853_68819544_1	chr14	-	903	9	ISM	ENSMUSG00000022057.9	ENSMUST00000022641.9	2442	14	0	8024	0	-2694	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCACACACTTCATGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	68819544	68808852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_68808948_68809201_68809274_68810274_68810335_68810527_68810715_68814535_68814613_68815299_68815379_68816602_68816680_68817985_68818105_68819407
ENSMUSG00000022057.9_68808876_68819544_1	chr14	-	880	9	ISM	ENSMUSG00000022057.9	ENSMUST00000022641.9	2442	14	0	8047	0	-2717	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGCCCAACCTTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	68819544	68808875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_68808948_68809201_68809274_68810274_68810335_68810527_68810715_68814535_68814613_68815299_68815379_68816602_68816680_68817985_68818105_68819407
ENSMUSG00000022057.9_68810275_68810716_1	chr14	-	253	2	ISM	ENSMUSG00000022057.9	ENST00000522298.1	1234	11	8813	4116	8813	-4116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATGAAAGATGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	68810716	68810274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_68810335_68810523
ENSMUSG00000022064.11_99377971_99491652_1	chr14	+	915	8	NNC	ENSMUSG00000022064.11	novel	916	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTTGAAGAAAGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	99377970	99491652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_99378099_99423916_99424068_99425153_99425245_99433785_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99491596
ENSMUSG00000022064.11_99377971_99491652_2	chr14	+	915	8	NNC	ENSMUSG00000022064.11	novel	916	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTTGAAGAAAGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	99377970	99491652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_99378099_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458995_99459080_99480274_99480446_99491596
ENSMUSG00000022064.11_99377971_99491652_3	chr14	+	916	8	FSM	ENSMUSG00000022064.11	ENST00000615625.1	916	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTTGAAGAAAGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	99377970	99491652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_99378099_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99491596
ENSMUSG00000022064.11_99377971_99491652_4	chr14	+	907	8	NNC	ENSMUSG00000022064.11	novel	916	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTTGAAGAAAGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	99377970	99491652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_99378099_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99491605
ENSMUSG00000022064.11_99377971_99491652_5	chr14	+	908	8	NNC	ENSMUSG00000022064.11	novel	916	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTTGAAGAAAGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	99377970	99491652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_99378099_99423916_99424068_99425153_99425245_99433784_99433888_99448383_99448507_99458994_99459080_99480274_99480446_99491596
ENSMUSG00000022064.11_99377971_99491652_6	chr14	+	911	8	NNC	ENSMUSG00000022064.11	novel	916	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTTGAAGAAAGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	99377970	99491652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_99378099_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448502_99458994_99459080_99480274_99480446_99491596
ENSMUSG00000022066.17_69803194_69821438_1	chr14	+	1910	12	NNC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	10297	-1531	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACACTGCGTCAGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	69803193	69821438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812825_69814520_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
ENSMUSG00000022066.17_69804770_69821438_2	chr14	+	1808	11	NNC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	11873	-1531	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	912	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACACTGCGTCAGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	69804769	69821438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812825_69814524_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
ENSMUSG00000022070.8_99294182_99299789_1	chr14	+	447	5	ISM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	10369	12187	10369	-12187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTACCTTCTCACCTATC	NA	NA	NA	NA	NA	NA	NA	NA	99294181	99299789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704
ENSMUSG00000022076.11_96343736_96374089_1	chr14	-	341	3	ISM	ENSMUSG00000022076.11	ENST00000545028.2	3959	10	382481	1029	382449	-1029	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTATTTTATATCGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	96374089	96343735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_96343836_96360652_96360825_96374020
ENSMUSG00000022076.11_96343812_96374143_1	chr14	-	319	3	ISM	ENSMUSG00000022076.11	ENST00000545028.2	3959	10	382427	1105	382395	-1105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGTGCCTGTGTGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	96374143	96343811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_96343836_96360652_96360825_96374020
ENSMUSG00000022076.11_96360782_96389399_1	chr14	-	314	3	ISM	ENSMUSG00000022076.11	ENST00000545028.2	3959	10	367171	18075	367139	-18075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGCCTAGAGATGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	96389399	96360781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_96360825_96374020_96374234_96389341
ENSMUSG00000022076.11_96374114_96438672_1	chr14	-	307	3	ISM	ENSMUSG00000022076.11	ENST00000545028.2	3959	10	317898	31407	317866	-31407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCCACCTGTGATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	96438672	96374113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_96374234_96389341_96389505_96438648
ENSMUSG00000022076.11_96374177_96438743_1	chr14	-	315	3	ISM	ENSMUSG00000022076.11	ENST00000545028.2	3959	10	317827	31470	317795	-31470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATCCTCATACAAATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	96438743	96374176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_96374234_96389341_96389505_96438648
ENSMUSG00000022076.11_96438815_96517507_1	chr14	-	315	3	ISM	ENSMUSG00000022076.11	ENST00000545028.2	3959	10	239063	96108	239031	-96108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGGCAGAAGGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	96517507	96438814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_96438874_96477643_96477831_96517438
ENSMUSG00000022076.11_96517480_96584373_1	chr14	-	340	2	ISM	ENSMUSG00000022076.11	ENST00000545028.2	3959	10	172197	174773	172165	-174773	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCCTTGCCTTCATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	96584373	96517479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_96517652_96584205
ENSMUSG00000022076.11_96517583_96606034_1	chr14	-	327	3	ISM	ENSMUSG00000022076.11	ENST00000545028.2	3959	10	150536	174876	150504	-174876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCCAGTGATGATGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	96606034	96517582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_96517652_96584205_96584403_96605973
ENSMUSG00000022076.11_96584368_96755396_1	chr14	-	321	3	ISM	ENSMUSG00000022076.11	ENST00000545028.2	3959	10	1174	241661	1142	-241661	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGCAGCTGCTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	96755396	96584367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_96584403_96605973_96606111_96755247
ENSMUSG00000022089.10_70337555_70372319_1	chr14	+	698	8	ISM	ENSMUSG00000022089.10	ENSMUST00000022680.9	1767	9	1	3336	1	-2428	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGACAAGGCTTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	70337554	70372319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_70337646_70356052_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184
ENSMUSG00000022089.10_70356056_70374622_1	chr14	+	639	8	ISM	ENSMUSG00000022089.10	ENSMUST00000022680.9	1767	9	18502	1033	-5234	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGACCCAGCAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	70356055	70374622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184_70372320_70374587
ENSMUSG00000022089.10_70361294_70374748_1	chr14	+	640	5	FSM	ENSMUSG00000022089.10	ENST00000399977.8	643	5	4	-1	4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCCTTAGACTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	70361293	70374748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_70361331_70366298_70366450_70371884_70372041_70372184_70372320_70374587
ENSMUSG00000022089.10_70361294_70374748_2	chr14	+	633	5	NNC	ENSMUSG00000022089.10	novel	643	5	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCCTTAGACTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	70361293	70374748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_70361331_70366298_70366450_70371884_70372041_70372191_70372320_70374587
ENSMUSG00000022089.10_70361294_70374748_4	chr14	+	634	5	NNC	ENSMUSG00000022089.10	novel	643	5	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCCTTAGACTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	70361293	70374748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_70361331_70366298_70366444_70371884_70372041_70372184_70372320_70374587
ENSMUSG00000022089.10_70366299_70374748_1	chr14	+	595	4	NNC	ENSMUSG00000022089.10	novel	1767	9	NA	NA	5009	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCCTTAGACTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	70366298	70374748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_70366456_70371898_70372041_70372184_70372320_70374587
ENSMUSG00000022089.10_70366965_70374875_1	chr14	+	608	4	ISM	ENSMUSG00000022089.10	ENSMUST00000022680.9	1767	9	29411	780	5675	128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACTTAAATGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	70366964	70374875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_70367008_70371898_70372041_70372184_70372320_70374587
ENSMUSG00000022089.10_70371987_70375026_1	chr14	+	628	3	ISM	ENSMUSG00000022089.10	ENST00000399977.8	643	5	10697	-279	10697	279	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGGAGCCTTTGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	70371986	70375026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_70372041_70372184_70372320_70374587
ENSMUSG00000022089.10_70372281_70375171_1	chr14	+	623	2	ISM	ENSMUSG00000022089.10	ENST00000399977.8	643	5	10991	-424	10991	424	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGGGCCCTTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	70372280	70375171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_70372320_70374587
ENSMUSG00000022090.11_70401680_70408747_1	chr14	-	968	5	ISM	ENSMUSG00000022090.11	ENSMUST00000153735.8	1578	10	5521	0	-2904	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGTATTTTCTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	70408747	70401679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70402243_70403538_70403657_70405109_70405238_70405413_70405494_70408668
ENSMUSG00000022090.11_70402047_70408977_1	chr14	-	594	5	ISM	ENSMUSG00000022090.11	ENST00000622702.1	1034	7	2954	141	2954	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCACTCTCAGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	70408977	70402046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70402243_70403538_70403657_70405109_70405235_70405403_70405494_70408912
ENSMUSG00000022090.11_70402047_70409015_1	chr14	-	632	5	ISM	ENSMUSG00000022090.11	ENST00000622702.1	1034	7	2916	141	2916	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCACTCTCAGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	70409015	70402046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70402243_70403538_70403657_70405109_70405235_70405403_70405494_70408912
ENSMUSG00000022090.11_70402047_70411832_1	chr14	-	877	8	ISM	ENSMUSG00000022090.11	ENST00000397760.8	1578	10	2354	141	99	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCACTCTCAGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	70411832	70402046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70402243_70403538_70403657_70405109_70405235_70405403_70405494_70408668_70408748_70408908_70409061_70409163_70409234_70411785
ENSMUSG00000022090.11_70402047_70412741_1	chr14	-	1055	9	ISM	ENSMUSG00000022090.11	ENSMUST00000153735.8	1578	10	1527	367	-810	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCACTCTCAGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	70412741	70402046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70402243_70403538_70403657_70405109_70405238_70405413_70405494_70408668_70408748_70408908_70409061_70409163_70409234_70411785_70411938_70412661
ENSMUSG00000022090.11_70402158_70411904_1	chr14	-	838	8	ISM	ENSMUSG00000022090.11	ENST00000397760.8	1578	10	2282	252	27	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGCCACTTCTGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	70411904	70402157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70402243_70403538_70403657_70405109_70405235_70405403_70405494_70408668_70408748_70408908_70409061_70409163_70409234_70411785
ENSMUSG00000022090.11_70402176_70409195_1	chr14	-	580	6	ISM	ENSMUSG00000022090.11	ENST00000622702.1	1034	7	2736	270	2736	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGAACCTGAAGATGCG	NA	NA	NA	NA	NA	NA	NA	NA	70409195	70402175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70402243_70403538_70403657_70405109_70405235_70405403_70405494_70408912_70409061_70409163
ENSMUSG00000022090.11_70402211_70415130_1	chr14	-	979	10	FSM	ENSMUSG00000022090.11	ENSMUST00000022681.11	1523	10	0	544	0	-215	multi-exon	FALSE	canonical	NA	NA	NA	NA	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGACACCCTGGCTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	70415130	70402210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_70402243_70403538_70403657_70405109_70405238_70405413_70405494_70408668_70408748_70408908_70409061_70409163_70409234_70411785_70411938_70412661_70412757_70415057
ENSMUSG00000022090.11_70402225_70411939_1	chr14	-	806	8	ISM	ENSMUSG00000022090.11	ENST00000397760.8	1578	10	2247	319	-8	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGGGGAGGTACCGAC	NA	NA	NA	NA	NA	NA	NA	NA	70411939	70402224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70402243_70403538_70403657_70405109_70405235_70405403_70405494_70408668_70408748_70408908_70409061_70409163_70409234_70411785
ENSMUSG00000022090.11_70403538_70411855_1	chr14	-	622	6	ISM	ENSMUSG00000022090.11	ENST00000622702.1	1034	7	76	1632	76	-1542	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTATTGGGGGGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	70411855	70403537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70403657_70405109_70405235_70405403_70405494_70408912_70409061_70409163_70409234_70411785
ENSMUSG00000022090.11_70403603_70411939_1	chr14	-	641	6	ISM	ENSMUSG00000022090.11	ENST00000622702.1	1034	7	-8	1697	-8	-1607	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAGGGCCTTGGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	70411939	70403602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70403657_70405109_70405235_70405403_70405494_70408912_70409061_70409163_70409234_70411785
ENSMUSG00000022090.11_70403603_70412759_1	chr14	-	820	8	ISM	ENSMUSG00000022090.11	ENST00000397760.8	1578	10	1427	1697	-828	-1607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAGGGCCTTGGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	70412759	70403602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70403657_70405109_70405235_70405403_70405494_70408668_70408748_70408908_70409061_70409163_70409234_70411785_70411938_70412661
ENSMUSG00000022090.11_70405213_70413946_1	chr14	-	780	8	ISM	ENSMUSG00000022090.11	ENST00000397760.8	1578	10	240	3307	240	-3217	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTGTTCAAGATGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	70413946	70405212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70405235_70405403_70405494_70408668_70408748_70408908_70409061_70409163_70409234_70411785_70411938_70412661_70412757_70413826
ENSMUSG00000022090.11_70405213_70413982_1	chr14	-	816	8	ISM	ENSMUSG00000022090.11	ENST00000397760.8	1578	10	204	3307	204	-3217	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTGTTCAAGATGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	70413982	70405212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70405235_70405403_70405494_70408668_70408748_70408908_70409061_70409163_70409234_70411785_70411938_70412661_70412757_70413826
ENSMUSG00000022090.11_70405213_70414268_1	chr14	-	794	8	ISM	ENSMUSG00000022090.11	ENSMUST00000153735.8	1578	10	0	3533	0	-3217	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTGTTCAAGATGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	70414268	70405212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70405238_70405413_70405494_70408668_70408748_70408908_70409061_70409163_70409234_70411785_70411938_70412661_70412757_70414127
ENSMUSG00000022090.11_70405466_70414085_1	chr14	-	835	7	ISM	ENSMUSG00000022090.11	ENST00000397760.8	1578	10	101	3560	101	-3470	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGAGGGTGCTGCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	70414085	70405465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70405494_70408668_70408748_70408908_70409061_70409163_70409234_70411785_70411938_70412661_70412757_70413826
ENSMUSG00000022095.10_70820736_70824102_1	chr14	-	2458	6	ISM	ENSMUSG00000022095.10	ENSMUST00000022690.10	4033	17	13173	0	13173	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGACTCTCCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	70824102	70820735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009
ENSMUSG00000022095.10_70821611_70826376_1	chr14	-	2399	12	ISM	ENSMUSG00000022095.10	ENSMUST00000022690.10	4033	17	10899	875	10899	-875	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGGCTAGGCCGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	70826376	70821610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315
ENSMUSG00000022097.5_70758389_70758850_1	chr14	-	261	2	ISM	ENSMUSG00000022097.5	ENST00000524255.5	628	5	2637	8	2637	-3	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAAGAGTGGCGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	70758850	70758388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70758556_70758756
ENSMUSG00000022097.5_70758389_70761521_1	chr14	-	481	4	FSM	ENSMUSG00000022097.5	ENST00000520605.5	455	4	-34	8	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAAGAGTGGCGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	70761521	70758388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_70758556_70759244_70759356_70759593_70759717_70761441
ENSMUSG00000022097.5_70758496_70759356_1	chr14	-	345	3	ISM	ENSMUSG00000022097.5	ENST00000524255.5	628	5	2131	115	2131	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGAAGCTGCTCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	70759356	70758495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70758556_70758756_70758926_70759240
ENSMUSG00000022097.5_70758496_70759356_2	chr14	-	344	3	NNC	ENSMUSG00000022097.5	novel	792	6	NA	NA	2131	-103	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGAAGCTGCTCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	70759356	70758495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_70758556_70758756_70758929_70759244
ENSMUSG00000022097.5_70758496_70759616_1	chr14	-	551	3	ISM	ENSMUSG00000022097.5	ENST00000521315.5	971	5	1871	115	1871	-103	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGAAGCTGCTCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	70759616	70758495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70758913_70759244_70759356_70759593
ENSMUSG00000022097.5_70758756_70759356_1	chr14	-	282	2	NIC	ENSMUSG00000022097.5	novel	966	6	NA	NA	2131	-363	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAACAGTACCTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	70759356	70758755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_-_70758926_70759244
ENSMUSG00000022097.5_70758756_70759616_1	chr14	-	308	3	ISM	ENSMUSG00000022097.5	ENST00000524255.5	628	5	1871	375	1871	-363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAACAGTACCTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	70759616	70758755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70758926_70759240_70759356_70759593
ENSMUSG00000022097.5_70758756_70759717_1	chr14	-	409	3	ISM	ENSMUSG00000022097.5	ENST00000524255.5	628	5	1770	375	1770	-363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAACAGTACCTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	70759717	70758755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70758926_70759240_70759356_70759593
ENSMUSG00000022098.11_70712333_70715384_1	chr14	-	449	2	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	42244	335	42244	-335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTGAAGTGACCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	70715384	70712332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70712690_70715292
ENSMUSG00000022098.11_70712403_70715456_1	chr14	-	451	2	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	42172	405	42172	-405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTCCCTGTAAGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	70715456	70712402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70712690_70715292
ENSMUSG00000022098.11_70712539_70717046_1	chr14	-	464	3	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	40582	541	40582	-541	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCGGGAACTGGAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	70717046	70712538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70712690_70715292_70715544_70716984
ENSMUSG00000022098.11_70712592_70717106_1	chr14	-	471	3	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	40522	594	40522	-594	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAGTTCCAGGACACAC	NA	NA	NA	NA	NA	NA	NA	NA	70717106	70712591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70712690_70715292_70715544_70716984
ENSMUSG00000022098.11_70712675_70717163_1	chr14	-	445	3	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	40465	677	40465	-677	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGGCTGGAGATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	70717163	70712674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70712690_70715292_70715544_70716984
ENSMUSG00000022098.11_70715474_70723651_1	chr14	-	477	4	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	33977	3476	33977	-3476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTACCCTGGAGGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	70723651	70715473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70715544_70716984_70717199_70717593_70717722_70723586
ENSMUSG00000022098.11_70717032_70727530_1	chr14	-	492	4	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	30098	5034	30098	-5034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAACTCGGTACAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	70727530	70717031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70717199_70717593_70717722_70723586_70723713_70727459
ENSMUSG00000022098.11_70717662_70728062_1	chr14	-	443	4	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	29566	5664	29566	-5664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGTACCCCAGCAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	70728062	70717661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70717722_70723586_70723713_70727459_70727641_70727986
ENSMUSG00000022098.11_70717695_70728147_1	chr14	-	495	4	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	29481	5697	29481	-5697	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGGCACCATCACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	70728147	70717694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70717722_70723586_70723713_70727459_70727641_70727986
ENSMUSG00000022098.11_70723656_70728840_1	chr14	-	449	4	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	28788	11658	28788	-11658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGCAGCTACGAGTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	70728840	70723655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70723713_70727459_70727641_70727986_70728148_70728790
ENSMUSG00000022098.11_70727496_70729541_1	chr14	-	458	4	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	28087	15498	28087	-15498	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCAAAAAGGGCTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	70729541	70727495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70727641_70727986_70728148_70728790_70728917_70729515
ENSMUSG00000022098.11_70727618_70729660_1	chr14	-	455	4	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	27968	15620	27968	-15620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCGCAGCGGACTCACGG	NA	NA	NA	NA	NA	NA	NA	NA	70729660	70727617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70727641_70727986_70728148_70728790_70728917_70729515
ENSMUSG00000022098.11_70742799_70745977_1	chr14	-	465	4	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	11651	30801	11651	-30801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCCGGAAGCTCTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	70745977	70742798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70742897_70744892_70744999_70745438_70745618_70745895
ENSMUSG00000022098.11_70744934_70746277_1	chr14	-	450	4	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	11351	32936	11351	-32936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACAGTATCATGCACTA	NA	NA	NA	NA	NA	NA	NA	NA	70746277	70744933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70744999_70745438_70745618_70745895_70746014_70746189
ENSMUSG00000022098.11_70745482_70749040_1	chr14	-	439	4	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	8588	33484	8588	-33484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGACCGCCATGTCTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	70749040	70745481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70745618_70745895_70746014_70746189_70746355_70749020
ENSMUSG00000022098.11_70745543_70749101_1	chr14	-	439	4	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	8527	33545	8527	-33545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGGTCCATGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	70749101	70745542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70745618_70745895_70746014_70746189_70746355_70749020
ENSMUSG00000022098.11_70745935_70757409_1	chr14	-	459	4	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	219	33937	219	-33937	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGACAGCTATATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	70757409	70745934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70746014_70746189_70746355_70749020_70749135_70757308
ENSMUSG00000022098.11_70746297_70757595_1	chr14	-	459	3	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	33	34299	33	-34299	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGATGGAGAGGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	70757595	70746296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70746355_70749020_70749135_70757308
ENSMUSG00000022106.15_73391758_73421134_1	chr14	+	2864	13	ISM	ENSMUSG00000022106.15	ENSMUST00000169479.8	3351	14	2833	353	2833	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGAATCCTATGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	73391757	73421134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ENSMUSG00000022106.15_73399380_73411353_1	chr14	+	955	6	ISM	ENSMUSG00000022106.15	ENST00000453021.1	1219	8	-4	3222	-4	-3222	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTTGTCCTTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	73399379	73411353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_73399524_73399766_73399918_73402123_73402291_73403919_73404079_73405429_73405573_73411162
ENSMUSG00000022106.15_73399482_73411880_1	chr14	+	904	7	ISM	ENSMUSG00000022106.15	ENST00000453021.1	1219	8	98	2695	98	-2695	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGACACTGCAGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	73399481	73411880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_73399524_73399766_73399918_73402123_73402291_73403919_73404079_73405429_73405573_73411162_73411354_73411829
ENSMUSG00000022106.15_73399767_73414507_1	chr14	+	1011	7	ISM	ENSMUSG00000022106.15	ENST00000453021.1	1219	8	383	68	383	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCCGAGCTTTCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	73399766	73414507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_73399918_73402123_73402291_73403919_73404079_73405429_73405573_73411162_73411354_73411829_73411957_73414434
ENSMUSG00000022106.15_73402198_73414575_1	chr14	+	854	6	ISM	ENSMUSG00000022106.15	ENST00000453021.1	1219	8	2814	0	2814	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCATCAGAGACCTTACC	NA	NA	NA	NA	NA	NA	NA	NA	73402197	73414575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_73402291_73403919_73404079_73405429_73405573_73411162_73411354_73411829_73411957_73414434
ENSMUSG00000022108.9_73599666_73603967_1	chr14	-	1387	4	ISM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	18762	0	18671	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTGGATGCTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	73603967	73599665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760
ENSMUSG00000022108.9_73599800_73605838_1	chr14	-	1353	5	ISM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	16891	134	16800	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTCTTCATACTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	73605838	73599799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738
ENSMUSG00000022108.9_73600044_73622664_1	chr14	-	1353	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	65	378	0	289	multi-exon	FALSE	canonical	NA	NA	NA	NA	6255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTAATTAAAATGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	73622664	73600043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
ENSMUSG00000022108.9_73600325_73622664_1	chr14	-	754	4	FSM	ENSMUSG00000022108.9	ENST00000378549.5	746	4	0	-8	0	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACCTTTCTTTTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	73622664	73600324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_73600584_73601981_73602133_73605738_73605868_73622449
ENSMUSG00000022110.14_73798003_73816855_1	chr14	+	382	4	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	7797	16368	7797	-16368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCTGAAGCCATTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	73798002	73816855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_73798062_73806073_73806174_73806301_73806465_73816795
ENSMUSG00000022110.14_73806094_73819157_1	chr14	+	411	4	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	15888	14066	15888	-14066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAGCAGAAAACATGAT	NA	NA	NA	NA	NA	NA	NA	NA	73806093	73819157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_73806174_73806301_73806465_73816795_73816925_73819118
ENSMUSG00000022110.14_73806353_73828211_1	chr14	+	395	4	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	16147	5012	16147	-5012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGATCAATTTTGATTCA	NA	NA	NA	NA	NA	NA	NA	NA	73806352	73828211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_73806465_73816795_73816925_73819118_73819258_73828196
ENSMUSG00000022110.14_73806392_73828274_1	chr14	+	419	4	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	16186	4949	16186	-4949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGTCAGGAAGACGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	73806391	73828274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_73806465_73816795_73816925_73819118_73819258_73828196
ENSMUSG00000022110.14_73819119_73828473_1	chr14	+	325	3	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	28913	4750	28913	-4750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCACAATGGATATAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	73819118	73828473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_73819258_73828196_73828359_73828449
ENSMUSG00000022110.14_73819119_73828592_1	chr14	+	444	3	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	28913	4631	28913	-4631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGTGGGGCTTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	73819118	73828592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_73819258_73828196_73828359_73828449
ENSMUSG00000022110.14_73819221_73830118_1	chr14	+	389	4	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	29015	3105	29015	-3105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTATTGCACAAGGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	73819220	73830118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_73819258_73828196_73828359_73828449_73828593_73830071
ENSMUSG00000022110.14_73828281_73831171_1	chr14	+	397	4	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	38075	2052	38075	-2052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATGATTTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	73828280	73831171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_73828359_73828449_73828593_73830071_73830193_73831116
ENSMUSG00000022110.14_73828453_73832867_1	chr14	+	404	4	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	38247	356	38247	-356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTCAATTGCCAATATG	NA	NA	NA	NA	NA	NA	NA	NA	73828452	73832867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_73828593_73830071_73830193_73831116_73831206_73832813
ENSMUSG00000022110.14_73828511_73832913_1	chr14	+	392	4	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	38305	310	38305	-310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTAATGTGCTGTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	73828510	73832913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_73828593_73830071_73830193_73831116_73831206_73832813
ENSMUSG00000022110.14_73828575_73832956_1	chr14	+	371	4	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	38369	267	38369	-267	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCCCTTTTCTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	73828574	73832956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_73828593_73830071_73830193_73831116_73831206_73832813
ENSMUSG00000022110.14_73830168_73833085_1	chr14	+	386	3	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	39962	138	39962	-138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTACGGTGGTCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	73830167	73833085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_73830193_73831116_73831206_73832813
ENSMUSG00000022111.10_101891430_101903988_1	chr14	+	296	3	NNC	ENSMUSG00000022111.10	novel	903	9	NA	NA	0	-29573	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGGACAAGATGTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	101891429	101903988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_101891556_101903196_101903326_101903947
ENSMUSG00000022111.10_101891461_101904047_1	chr14	+	324	3	NNC	ENSMUSG00000022111.10	novel	903	9	NA	NA	31	-29514	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAACGATTGGACTAATC	NA	NA	NA	NA	NA	NA	NA	NA	101891460	101904047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_101891556_101903196_101903326_101903947
ENSMUSG00000022111.10_101903232_101904513_1	chr14	+	337	3	ISM	ENSMUSG00000022111.10	ENSMUST00000002289.8	903	9	11802	29048	11802	-29048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTACCTTCCTTCTATC	NA	NA	NA	NA	NA	NA	NA	NA	101903231	101904513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_101903326_101903947_101904105_101904427
ENSMUSG00000022111.10_101904039_101932646_1	chr14	+	328	5	ISM	ENSMUSG00000022111.10	ENSMUST00000002289.8	903	9	12609	915	12609	-915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAGAGGTAACAGTAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	101904038	101932646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594
ENSMUSG00000022111.10_101904459_101933422_1	chr14	+	323	5	ISM	ENSMUSG00000022111.10	ENSMUST00000002289.8	903	9	13029	139	13029	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTGACAGAAACACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	101904458	101933422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
ENSMUSG00000022114.6_106130270_106134051_1	chr14	-	996	2	FSM	ENSMUSG00000022114.6	ENSMUST00000022709.6	2087	2	202	889	202	-889	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCCCCTAGGAACTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	106134051	106130269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_106131236_106134021
ENSMUSG00000022114.6_106130399_106134253_1	chr14	-	1069	2	FSM	ENSMUSG00000022114.6	ENSMUST00000022709.6	2087	2	0	1018	0	-1018	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGTTTATGGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	106134253	106130398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_106131236_106134021
ENSMUSG00000022120.5_104717171_104747818_1	chr14	-	1074	5	ISM	ENSMUSG00000022120.5	ENSMUST00000022716.4	3420	6	12250	2199	12250	-2199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAAACAGAGAGAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	104747818	104717170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_104717734_104740782_104740872_104743528_104743778_104745374_104745467_104747737
ENSMUSG00000022124.16_103318470_103329862_1	chr14	-	2772	3	ISM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	6573	0	6549	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTATTTTTATAAC	NA	NA	NA	NA	NA	NA	NA	NA	103329862	103318469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_103320947_103326737_103326910_103329739
ENSMUSG00000022124.16_103318619_103332737_1	chr14	-	2732	4	ISM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	3698	149	3674	-149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTATTTGAAAACTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	103332737	103318618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628
ENSMUSG00000022124.16_103318877_103336244_1	chr14	-	2754	5	FSM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	191	407	167	243	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAATGGCTGTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	103336244	103318876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336204
ENSMUSG00000022124.16_103318924_103336310_1	chr14	-	2773	5	FSM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	125	454	101	196	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGGAAGCTAACAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	103336310	103318923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336204
ENSMUSG00000022124.16_103319120_103336411_1	chr14	-	2678	5	FSM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	24	650	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAGTTTTGGTTATATT	NA	NA	NA	NA	NA	NA	NA	NA	103336411	103319119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336204
ENSMUSG00000022125.8_103307652_103313380_1	chr14	+	761	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	0	1684	0	-1684	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACGACTGTTCGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	103307651	103313380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
ENSMUSG00000022125.8_103307784_103313449_1	chr14	+	698	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	132	1615	132	-1615	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATAGAAACAAACTATACG	NA	NA	NA	NA	NA	NA	NA	NA	103307783	103313449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
ENSMUSG00000022125.8_103307837_103313507_1	chr14	+	703	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	185	1557	185	-1557	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAACATCTATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	103307836	103313507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
ENSMUSG00000022125.8_103309166_103313625_1	chr14	+	658	3	ISM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	1514	1439	1514	-1439	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTTTGATACAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	103309165	103313625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_103309236_103310622_103310849_103313263
ENSMUSG00000022125.8_103310623_103313729_1	chr14	+	692	2	ISM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	2971	1335	2971	-1335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACCCCGTTACCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	103310622	103313729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_103310849_103313263
ENSMUSG00000022130.11_118349886_118351824_1	chr14	-	784	2	ISM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	18335	-2	18335	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGTCTTTTTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	118351824	118349885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118350570_118351724
ENSMUSG00000022130.11_118350064_118353596_1	chr14	-	769	4	ISM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	16563	176	16563	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATTAAGTTAAATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	118353596	118350063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490
ENSMUSG00000022130.11_118350297_118357072_1	chr14	-	721	7	ISM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	13087	409	13087	-409	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTCAGGCAGTGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	118357072	118350296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051
ENSMUSG00000022130.11_118350414_118359159_1	chr14	-	711	8	ISM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	11000	526	11000	-526	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTCTCTCCGGGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	118359159	118350413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130
ENSMUSG00000022130.11_118350463_118359221_1	chr14	-	724	8	ISM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	10938	575	10938	-575	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCATCCTACCTCAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	118359221	118350462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130
ENSMUSG00000022130.11_118350535_118359268_1	chr14	-	699	8	ISM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	10891	647	10891	-647	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGCAGAAAAGGCATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	118359268	118350534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130
ENSMUSG00000022130.11_118351725_118364997_1	chr14	-	760	8	ISM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	5162	1837	5162	-1837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTAGTACTGCGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	118364997	118351724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906
ENSMUSG00000022130.11_118352529_118365703_1	chr14	-	731	8	ISM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	4456	2641	4456	-2641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGACTGTGTGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	118365703	118352528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634
ENSMUSG00000022130.11_118353491_118368085_1	chr14	-	739	8	ISM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	2074	3603	2074	-3603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTCAGCCATGGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	118368085	118353490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018
ENSMUSG00000022130.11_118353597_118370156_1	chr14	-	734	9	ISM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	3	3709	3	-3709	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCCTCACTGTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	118370156	118353596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
ENSMUSG00000022131.4_118374723_118385552_1	chr14	+	245	3	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	153	15121	153	-15121	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCGAGTGTTCTATGC	NA	NA	NA	NA	NA	NA	NA	NA	118374722	118385552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_118374753_118377148_118377308_118385496
ENSMUSG00000022131.4_118377234_118385663_1	chr14	+	241	2	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	2664	15010	2664	-15010	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCACTGGATCATTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	118377233	118385663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_118377308_118385496
ENSMUSG00000022131.4_118385521_118391048_1	chr14	+	245	2	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	10951	9625	10951	-9625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGGCAGGCTATGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	118385520	118391048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_118385698_118390980
ENSMUSG00000022131.4_118385640_118391309_1	chr14	+	260	3	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	11070	9364	11070	-9364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCCTCTCATAGGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	118385639	118391309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_118385698_118390980_118391162_118391288
ENSMUSG00000022131.4_118391103_118395466_1	chr14	+	267	3	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	16533	5207	16533	-5207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCGAGCCGATGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	118391102	118395466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_118391162_118391288_118391339_118395308
ENSMUSG00000022131.4_118391291_118397455_1	chr14	+	257	3	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	16721	3218	16721	-3218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCACACCGCAGCTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	118391290	118397455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_118391339_118395308_118395467_118397404
ENSMUSG00000022131.4_118395433_118398990_1	chr14	+	248	3	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	20863	1683	20863	-1683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCAGCGCTCGCATGC	NA	NA	NA	NA	NA	NA	NA	NA	118395432	118398990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_118395467_118397404_118397597_118398968
ENSMUSG00000022131.4_118397422_118400026_1	chr14	+	279	3	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	22852	647	22852	-647	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCCGTGGCCATGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	118397421	118400026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_118397597_118398968_118399047_118400000
ENSMUSG00000022131.4_118397483_118400073_1	chr14	+	265	3	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	22913	600	22913	-600	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTACTGGGAGGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	118397482	118400073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_118397597_118398968_118399047_118400000
ENSMUSG00000022131.4_118397548_118400110_1	chr14	+	237	3	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	22978	563	22978	-563	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCACTGACCATCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	118397547	118400110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_118397597_118398968_118399047_118400000
ENSMUSG00000022131.4_118399028_118400255_1	chr14	+	274	2	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	24458	418	24458	-418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCAGGGCGTCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	118399027	118400255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_118399047_118400000
ENSMUSG00000022136.9_119175388_119215854_1	chr14	+	1725	11	NNC	ENSMUSG00000022136.9	novel	5141	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATCCTGTGGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	119175387	119215854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212551_119212677_119214121_119214271_119215438
ENSMUSG00000022136.9_119175388_119215854_10	chr14	+	1725	11	NNC	ENSMUSG00000022136.9	novel	5141	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATCCTGTGGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	119175387	119215854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_119175583_119190528_119190632_119195279_119195405_119198197_119198273_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ENSMUSG00000022136.9_119175388_119215854_11	chr14	+	1732	11	NNC	ENSMUSG00000022136.9	novel	5141	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATCCTGTGGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	119175387	119215854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119207511_119207694_119208095_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ENSMUSG00000022136.9_119175388_119215854_2	chr14	+	1733	11	FSM	ENSMUSG00000022136.9	ENST00000376795.6	1674	11	-58	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATCCTGTGGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	119175387	119215854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ENSMUSG00000022136.9_119175388_119215854_3	chr14	+	1725	11	NNC	ENSMUSG00000022136.9	novel	5141	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATCCTGTGGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	119175387	119215854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119207511_119207694_119208094_119208215_119209782_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ENSMUSG00000022136.9_119175388_119215854_4	chr14	+	1732	11	NNC	ENSMUSG00000022136.9	novel	5141	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATCCTGTGGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	119175387	119215854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214122_119214271_119215438
ENSMUSG00000022136.9_119175388_119215854_5	chr14	+	1726	11	NNC	ENSMUSG00000022136.9	novel	5141	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATCCTGTGGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	119175387	119215854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215445
ENSMUSG00000022136.9_119175388_119215854_6	chr14	+	1727	11	NNC	ENSMUSG00000022136.9	novel	5141	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATCCTGTGGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	119175387	119215854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119207511_119207685_119208091_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ENSMUSG00000022136.9_119175388_119215854_7	chr14	+	1725	11	NNC	ENSMUSG00000022136.9	novel	5141	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATCCTGTGGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	119175387	119215854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_119175575_119190520_119190632_119195279_119195405_119198197_119198273_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ENSMUSG00000022136.9_119175388_119215854_8	chr14	+	1728	11	NNC	ENSMUSG00000022136.9	novel	5141	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATCCTGTGGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	119175387	119215854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_119175583_119190520_119190632_119195279_119195405_119198202_119198273_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ENSMUSG00000022136.9_119175388_119215854_9	chr14	+	1727	11	NNC	ENSMUSG00000022136.9	novel	5141	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATCCTGTGGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	119175387	119215854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119207511_119207694_119208094_119208215_119209774_119209881_119210110_119210226_119212543_119212677_119214121_119214271_119215438
ENSMUSG00000022136.9_119205475_119215940_1	chr14	+	1392	8	ISM	ENSMUSG00000022136.9	ENSMUST00000022734.9	5141	12	30087	3169	30029	87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTGAGGAGGAGCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	119205474	119215940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ENSMUSG00000022136.9_119208121_119216246_1	chr14	+	1411	6	ISM	ENSMUSG00000022136.9	ENST00000376795.6	1674	11	32675	-393	32675	393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTAAAGTATATGAAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	119208120	119216246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ENSMUSG00000022136.9_119214200_119216789_1	chr14	+	1422	2	ISM	ENSMUSG00000022136.9	ENST00000376795.6	1674	11	38754	-936	38754	936	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAACATTGTGAGATATT	NA	NA	NA	NA	NA	NA	NA	NA	119214199	119216789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_119214271_119215438
ENSMUSG00000022139.18_120513142_120666419_1	chr14	+	1747	8	FSM	ENSMUSG00000022139.18	ENSMUST00000227012.2	2390	8	24	619	1	-619	multi-exon	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACATATTACCCCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	120513141	120666419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_120513318_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633862_120634017_120642049_120642145_120666346
ENSMUSG00000022139.18_120513142_120666419_2	chr14	+	1874	9	FSM	ENSMUSG00000022139.18	ENST00000679496.1	4588	9	23	2691	1	-619	multi-exon	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACATATTACCCCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	120513141	120666419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_120513318_120562073_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120640747_120640784_120666346
ENSMUSG00000022139.18_120562204_120666752_1	chr14	+	1901	8	ISM	ENSMUSG00000022139.18	ENST00000679496.1	4588	9	49085	2358	59	-286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTAGCTTTAGTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	120562203	120666752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120640747_120640784_120666346
ENSMUSG00000022139.18_120562622_120667053_1	chr14	+	1784	8	ISM	ENSMUSG00000022139.18	ENST00000679496.1	4588	9	49503	2057	477	15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCACGGTATGAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	120562621	120667053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120640747_120640784_120666346
ENSMUSG00000022139.18_120562711_120667053_1	chr14	+	1700	7	ISM	ENSMUSG00000022139.18	ENSMUST00000226800.2	3328	8	27625	1057	566	15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCACGGTATGAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	120562710	120667053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633862_120634017_120642049_120642145_120666346
ENSMUSG00000022139.18_120616653_120666742_1	chr14	+	1089	5	ISM	ENSMUSG00000022139.18	ENST00000397601.5	4228	6	54508	2368	54508	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGCAATAAACAGTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	120616652	120666742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_120616727_120622802_120623004_120626311_120626576_120633862_120634017_120666346
ENSMUSG00000022139.18_120616653_120667306_1	chr14	+	1743	7	ISM	ENSMUSG00000022139.18	ENST00000679496.1	4588	9	103534	1804	54508	268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGTGAGGAGGTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	120616652	120667306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120640747_120640784_120666346
ENSMUSG00000022139.18_120616653_120667358_1	chr14	+	1795	7	ISM	ENSMUSG00000022139.18	ENST00000679496.1	4588	9	103534	1752	54508	320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTACAGATGCAAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	120616652	120667358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120640747_120640784_120666346
ENSMUSG00000022139.18_120616653_120667421_1	chr14	+	1858	7	ISM	ENSMUSG00000022139.18	ENST00000679496.1	4588	9	103534	1689	54508	383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTTCACTTTTTAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	120616652	120667421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120640747_120640784_120666346
ENSMUSG00000022139.18_120622875_120667537_1	chr14	+	1828	6	ISM	ENSMUSG00000022139.18	ENST00000679496.1	4588	9	109756	1573	60730	499	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTATGTCTCAAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	120622874	120667537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120640747_120640784_120666346
ENSMUSG00000022139.18_120622917_120667602_1	chr14	+	1851	6	ISM	ENSMUSG00000022139.18	ENST00000679496.1	4588	9	109798	1508	60772	-508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATACTATATATGGA	NA	NA	NA	NA	NA	NA	NA	NA	120622916	120667602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120640747_120640784_120666346
ENSMUSG00000022139.18_120626345_120667708_1	chr14	+	1837	5	ISM	ENSMUSG00000022139.18	ENST00000679496.1	4588	9	113226	1402	64200	-402	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTTTTAAAGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	120626344	120667708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_120626576_120633123_120633178_120633862_120634017_120640747_120640784_120666346
ENSMUSG00000022139.18_120626445_120667815_1	chr14	+	1844	5	ISM	ENSMUSG00000022139.18	ENST00000679496.1	4588	9	113326	1295	64300	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTAAGAAATGAAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	120626444	120667815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_120626576_120633123_120633178_120633862_120634017_120640747_120640784_120666346
ENSMUSG00000022139.18_120626472_120666427_1	chr14	+	470	5	ISM	ENSMUSG00000022139.18	ENST00000345429.10	4607	9	113331	2683	64327	-611	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCCCGTTTCCTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	120626471	120666427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_120626576_120633862_120634017_120640747_120640784_120642049_120642145_120666346
ENSMUSG00000022139.18_120626512_120667860_1	chr14	+	1822	5	ISM	ENSMUSG00000022139.18	ENST00000679496.1	4588	9	113393	1250	64367	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTAAAACATCCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	120626511	120667860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_120626576_120633123_120633178_120633862_120634017_120640747_120640784_120666346
ENSMUSG00000022139.18_120626552_120666485_1	chr14	+	448	5	ISM	ENSMUSG00000022139.18	ENST00000345429.10	4607	9	113411	2625	64407	-553	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGACAGACCACAACCCTA	NA	NA	NA	NA	NA	NA	NA	NA	120626551	120666485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_120626576_120633862_120634017_120640747_120640784_120642049_120642145_120666346
ENSMUSG00000022139.18_120633899_120667358_1	chr14	+	1130	2	ISM	ENSMUSG00000022139.18	ENST00000397601.5	4228	6	71754	1752	71754	320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTACAGATGCAAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	120633898	120667358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_120634017_120666346
ENSMUSG00000022139.18_120633899_120668110_1	chr14	+	1918	3	ISM	ENSMUSG00000022139.18	ENST00000679496.1	4588	9	120780	1000	71754	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTGCATAGTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	120633898	120668110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_120634017_120640747_120640784_120666346
ENSMUSG00000022142.9_8138932_8187246_1	chr15	+	3975	34	NNC	ENSMUSG00000022142.9	novel	4001	34	NA	NA	21	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	950	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGTAGTATATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8138931	8187246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159613_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ENSMUSG00000022142.9_8138932_8187246_10	chr15	+	3979	34	NNC	ENSMUSG00000022142.9	novel	4001	34	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGTAGTATATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8138931	8187246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8173534_8173674_8174971_8175108_8176626_8176781_8176982_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ENSMUSG00000022142.9_8138932_8187246_11	chr15	+	3971	34	NNC	ENSMUSG00000022142.9	novel	4001	34	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGTAGTATATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8138931	8187246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148728_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ENSMUSG00000022142.9_8138932_8187246_12	chr15	+	3977	34	NNC	ENSMUSG00000022142.9	novel	4001	34	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	941	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGTAGTATATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8138931	8187246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187112
ENSMUSG00000022142.9_8138932_8187246_2	chr15	+	3975	34	NNC	ENSMUSG00000022142.9	novel	4001	34	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGTAGTATATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8138931	8187246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180246_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ENSMUSG00000022142.9_8138932_8187246_3	chr15	+	3974	34	NNC	ENSMUSG00000022142.9	novel	4001	34	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	902	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGTAGTATATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8138931	8187246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151687_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ENSMUSG00000022142.9_8138932_8187246_4	chr15	+	3972	34	NNC	ENSMUSG00000022142.9	novel	4001	34	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGTAGTATATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8138931	8187246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181204_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ENSMUSG00000022142.9_8138932_8187246_5	chr15	+	3979	34	NNC	ENSMUSG00000022142.9	novel	4001	34	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	934	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGTAGTATATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8138931	8187246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184400_8184537_8186169_8186277_8187109
ENSMUSG00000022142.9_8138932_8187246_6	chr15	+	3973	34	NNC	ENSMUSG00000022142.9	novel	4001	34	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGTAGTATATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8138931	8187246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151546_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ENSMUSG00000022142.9_8138932_8187246_7	chr15	+	3980	34	FSM	ENSMUSG00000022142.9	ENST00000513532.1	4001	34	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGTAGTATATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8138931	8187246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ENSMUSG00000022142.9_8138932_8187246_8	chr15	+	3974	34	NNC	ENSMUSG00000022142.9	novel	4001	34	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGTAGTATATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8138931	8187246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167343_8167454_8169334_8169433_8170712_8170844_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ENSMUSG00000022142.9_8138932_8187246_9	chr15	+	3972	34	NNC	ENSMUSG00000022142.9	novel	4001	34	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGTAGTATATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8138931	8187246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163640_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ENSMUSG00000022146.13_6881899_6903854_1	chr15	-	425	3	ISM	ENSMUSG00000022146.13	ENST00000502536.5	654	4	63	5386	63	-5386	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTACTTTGTGACTTATT	NA	NA	NA	NA	NA	NA	NA	NA	6903854	6881898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_6882070_6889773_6889851_6903677
ENSMUSG00000022150.17_6416229_6465978_1	chr15	+	2521	13	ISM	ENSMUSG00000022150.17	ENSMUST00000080880.12	4663	15	150	4208	0	-3131	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATCAAATGCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	6416228	6465978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_6416414_6446286_6446476_6447710_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6454115_6454179_6458776_6459431_6460434_6460589_6464645_6465282_6465871
ENSMUSG00000022150.17_6446287_6468388_1	chr15	+	2530	14	ISM	ENSMUSG00000022150.17	ENSMUST00000080880.12	4663	15	30208	1798	30027	-721	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGCCTCTTGTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	6446286	6468388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_6446476_6447710_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6454115_6454179_6458776_6459431_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ENSMUSG00000022150.17_6447761_6468561_1	chr15	+	2464	13	ISM	ENSMUSG00000022150.17	ENSMUST00000080880.12	4663	15	31682	1625	31501	-548	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCATTCTACCCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	6447760	6468561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6454115_6454179_6458776_6459431_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ENSMUSG00000022150.17_6451721_6468820_1	chr15	+	2529	11	ISM	ENSMUSG00000022150.17	ENSMUST00000080880.12	4663	15	35642	1366	35461	-289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCTAACTGCACCATTT	NA	NA	NA	NA	NA	NA	NA	NA	6451720	6468820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6454115_6454179_6458776_6459431_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ENSMUSG00000022150.17_6453676_6468988_1	chr15	+	2464	8	ISM	ENSMUSG00000022150.17	ENSMUST00000080880.12	4663	15	37597	1198	37416	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGATGACATTATGCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	6453675	6468988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_6453732_6454115_6454179_6458776_6459431_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ENSMUSG00000022150.17_6454115_6469109_1	chr15	+	2530	7	ISM	ENSMUSG00000022150.17	ENSMUST00000080880.12	4663	15	38036	1077	37855	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGGTGATCTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	6454114	6469109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_6454179_6458776_6459431_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ENSMUSG00000022150.17_6459352_6469669_1	chr15	+	2451	6	ISM	ENSMUSG00000022150.17	ENSMUST00000110664.9	4450	14	43123	517	43092	-517	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGCTTTTTGTTATACA	NA	NA	NA	NA	NA	NA	NA	NA	6459351	6469669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_6459431_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ENSMUSG00000022150.17_6460457_6469770_1	chr15	+	2451	5	ISM	ENSMUSG00000022150.17	ENSMUST00000110664.9	4450	14	44228	416	44197	-416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAAATGCTCAGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	6460456	6469770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ENSMUSG00000022150.17_6460520_6469840_1	chr15	+	2458	5	ISM	ENSMUSG00000022150.17	ENSMUST00000110664.9	4450	14	44291	346	44260	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTTAAACAAGGCGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	6460519	6469840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ENSMUSG00000022150.17_6460572_6469908_1	chr15	+	2474	5	ISM	ENSMUSG00000022150.17	ENSMUST00000110664.9	4450	14	44343	278	44312	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTTTCTGTTTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	6460571	6469908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ENSMUSG00000022150.17_6464745_6470019_1	chr15	+	2469	4	ISM	ENSMUSG00000022150.17	ENSMUST00000110664.9	4450	14	48516	167	48485	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCAAATACCTGAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	6464744	6470019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_6465282_6465871_6465979_6466463_6466532_6468262
ENSMUSG00000022150.17_6464877_6470186_1	chr15	+	2504	4	ISM	ENSMUSG00000022150.17	ENSMUST00000110664.9	4450	14	48648	0	48617	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAATTTCATGTCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	6464876	6470186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_6465282_6465871_6465979_6466463_6466532_6468262
ENSMUSG00000022150.17_6464933_6470193_1	chr15	+	2455	4	ISM	ENSMUSG00000022150.17	ENSMUST00000110664.9	4450	14	48704	-7	48673	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGTCGCTGTTAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	6464932	6470193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_6465282_6465871_6465979_6466463_6466532_6468262
ENSMUSG00000022151.17_5215006_5247074_1	chr15	+	928	5	FSM	ENSMUSG00000022151.17	ENSMUST00000118193.8	1671	5	0	743	0	-743	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGAGGAAGAGGGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	5215005	5247074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_5215054_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ENSMUSG00000022151.17_5219142_5247182_1	chr15	+	909	4	ISM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	4101	635	3934	-635	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAACTTCAATATATATAC	NA	NA	NA	NA	NA	NA	NA	NA	5219141	5247182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_5219285_5237849_5237932_5241479_5241612_5246630
ENSMUSG00000022151.17_5219202_5247256_1	chr15	+	923	4	ISM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	4161	561	3994	-561	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGGAAAGTACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	5219201	5247256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_5219285_5237849_5237932_5241479_5241612_5246630
ENSMUSG00000022151.17_5241516_5247451_1	chr15	+	917	2	ISM	ENSMUSG00000022151.17	ENSMUST00000081640.12	1583	4	26308	366	26308	-366	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATTGAATATTTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	5241515	5247451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_5241612_5246630
ENSMUSG00000022151.17_5241583_5247497_1	chr15	+	896	2	ISM	ENSMUSG00000022151.17	ENSMUST00000081640.12	1583	4	26375	320	26375	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTATATGTGAATATTTG	NA	NA	NA	NA	NA	NA	NA	NA	5241582	5247497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_5241612_5246630
ENSMUSG00000022157.9_56319676_56320870_1	chr14	-	496	3	ISM	ENSMUSG00000022157.9	ENSMUST00000015594.9	836	5	1784	53	1784	-53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATCCTGGGGTATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	56320870	56319675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_56319858_56320336_56320592_56320811
ENSMUSG00000022157.9_56319676_56320911_1	chr14	-	537	3	ISM	ENSMUSG00000022157.9	ENSMUST00000015594.9	836	5	1743	53	1743	-53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATCCTGGGGTATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	56320911	56319675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_56319858_56320336_56320592_56320811
ENSMUSG00000022157.9_56319812_56321304_1	chr14	-	479	4	ISM	ENSMUSG00000022157.9	ENSMUST00000015594.9	836	5	1350	189	1350	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCAGTTGTCGCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	56321304	56319811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_56319858_56320336_56320592_56320811_56320945_56321259
ENSMUSG00000022157.9_56320422_56322654_1	chr14	-	516	4	ISM	ENSMUSG00000022157.9	ENSMUST00000015594.9	836	5	0	799	0	-799	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCGCAGCATGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	56322654	56320421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_56320592_56320811_56320945_56321259_56321408_56322589
ENSMUSG00000022159.17_52500168_52506184_1	chr14	-	1374	4	ISM	ENSMUSG00000022159.17	ENSMUST00000167116.8	1573	9	10571	945	10571	-940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTAAGCTAGGTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	52506184	52500167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098
ENSMUSG00000022159.17_52500390_52516430_1	chr14	-	1370	7	ISM	ENSMUSG00000022159.17	ENSMUST00000167116.8	1573	9	325	1167	325	-1162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCTTTTCCTTAACTAC	NA	NA	NA	NA	NA	NA	NA	NA	52516430	52500389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370
ENSMUSG00000022159.17_52500670_52517002_1	chr14	-	1452	8	FSM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	0	1454	0	-1442	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGATATAACATTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	52517002	52500669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
ENSMUSG00000022174.9_54473068_54480271_1	chr14	-	219	2	ISM	ENSMUSG00000022174.9	ENSMUST00000022781.8	878	3	11290	132	11028	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCACGTCCAGAGAACTC	NA	NA	NA	NA	NA	NA	NA	NA	54480271	54473067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54473171_54480155
ENSMUSG00000022174.9_54480155_54491156_1	chr14	-	239	2	FSM	ENSMUSG00000022174.9	ENSMUST00000128231.2	3491	2	215	3037	143	39	multi-exon	FALSE	canonical	NA	NA	NA	NA	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCCATCCCAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	54491156	54480154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_54480326_54491088
ENSMUSG00000022175.10_54701594_54705528_1	chr14	+	1155	5	ISM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	0	3426	0	-3426	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACTTGAGTTACGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	54701593	54705528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54702069_54702360_54702406_54703030_54703167_54704916_54705108_54705220
ENSMUSG00000022175.10_54701714_54705581_1	chr14	+	1088	5	ISM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	120	3373	120	-3373	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGACCCCTCGACTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	54701713	54705581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54702069_54702360_54702406_54703030_54703167_54704916_54705108_54705220
ENSMUSG00000022175.10_54701983_54705852_1	chr14	+	1090	5	ISM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	389	3102	389	-3102	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACAGATGAGGAGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	54701982	54705852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54702069_54702360_54702406_54703030_54703167_54704916_54705108_54705220
ENSMUSG00000022175.10_54703093_54706090_1	chr14	+	1135	3	ISM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	1499	2864	1499	-2864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCAGTGATGAGTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	54703092	54706090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54703167_54704916_54705108_54705220
ENSMUSG00000022175.10_54705010_54706549_1	chr14	+	1173	3	ISM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	3416	2405	3416	-2405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTATGGGCAGCTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	54705009	54706549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54705108_54705220_54706239_54706492
ENSMUSG00000022175.10_54705434_54706891_1	chr14	+	1105	3	ISM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	3840	2063	3840	-2063	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGACCAGATCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	54705433	54706891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54706239_54706492_54706623_54706721
ENSMUSG00000022175.10_54705687_54707191_1	chr14	+	1152	3	ISM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	4093	1763	4093	-1763	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACTCACACAACAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	54705686	54707191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54706239_54706492_54706623_54706721
ENSMUSG00000022175.10_54706155_54707602_1	chr14	+	1095	3	ISM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	4561	1352	4561	-1352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGGTGATGGTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	54706154	54707602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54706239_54706492_54706623_54706721
ENSMUSG00000022177.10_54779242_54781723_1	chr14	-	735	4	ISM	ENSMUSG00000022177.10	ENST00000342454.12	908	7	5773	-286	5773	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTAGTCATTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	54781723	54779241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661
ENSMUSG00000022177.10_54779385_54781759_1	chr14	-	628	4	ISM	ENSMUSG00000022177.10	ENST00000342454.12	908	7	5737	-143	5737	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGTTTACAATGACAACA	NA	NA	NA	NA	NA	NA	NA	NA	54781759	54779384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661
ENSMUSG00000022177.10_54779528_54787270_1	chr14	-	769	6	NNC	ENSMUSG00000022177.10	novel	908	7	NA	NA	226	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1960	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGAGGCAGAACCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	54787270	54779527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_54779715_54779839_54779909_54781241_54781367_54781661_54781808_54783182_54783280_54787125
ENSMUSG00000022177.10_54779528_54787397_1	chr14	-	809	7	FSM	ENSMUSG00000022177.10	ENST00000342454.12	908	7	99	0	99	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGAGGCAGAACCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	54787397	54779527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54787125_54787258_54787350
ENSMUSG00000022177.10_54779528_54787397_2	chr14	-	803	7	NNC	ENSMUSG00000022177.10	novel	908	7	NA	NA	99	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGAGGCAGAACCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	54787397	54779527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783188_54783280_54787125_54787258_54787350
ENSMUSG00000022177.10_54779640_54786457_1	chr14	-	653	6	ISM	ENSMUSG00000022177.10	ENSMUST00000022784.9	1587	10	5361	398	1039	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTGGGAGAAGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	54786457	54779639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322
ENSMUSG00000022177.10_54779640_54787397_1	chr14	-	695	7	NNC	ENSMUSG00000022177.10	novel	908	7	NA	NA	99	-112	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTGGGAGAAGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	54787397	54779639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54787127_54787258_54787350
ENSMUSG00000022177.10_54779640_54787496_1	chr14	-	796	7	FSM	ENSMUSG00000022177.10	ENST00000342454.12	908	7	0	112	0	-112	multi-exon	FALSE	canonical	NA	NA	NA	NA	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTGGGAGAAGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	54787496	54779639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54787125_54787258_54787350
ENSMUSG00000022177.10_54779640_54787496_2	chr14	-	790	7	NNC	ENSMUSG00000022177.10	novel	908	7	NA	NA	0	-112	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTGGGAGAAGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	54787496	54779639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783188_54783280_54787125_54787258_54787350
ENSMUSG00000022177.10_54781235_54787397_1	chr14	-	689	6	ISM	ENSMUSG00000022177.10	ENSMUST00000022784.9	1587	10	4421	1993	99	-1707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGAGCCTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	54787397	54781234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54787258_54787350
ENSMUSG00000022177.10_54781358_54787397_1	chr14	-	188	3	ISM	ENSMUSG00000022177.10	ENST00000347758.6	665	5	99	1830	99	-1830	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGCCTCGCTTTGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	54787397	54781357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54781367_54787125_54787258_54787350
ENSMUSG00000022177.10_54781358_54787397_2	chr14	-	566	6	ISM	ENSMUSG00000022177.10	ENSMUST00000022784.9	1587	10	4421	2116	99	-1830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGCCTCGCTTTGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	54787397	54781357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54787258_54787350
ENSMUSG00000022177.10_54783218_54791818_1	chr14	-	733	6	ISM	ENSMUSG00000022177.10	ENSMUST00000022784.9	1587	10	0	3976	0	-3690	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACGCTGCTGTGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	54791818	54783217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
ENSMUSG00000022178.12_54805162_54810885_1	chr14	-	1772	7	ISM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	4130	233	4130	-233	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAACTCAGAAATCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	54810885	54805161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848
ENSMUSG00000022178.12_54805224_54810926_1	chr14	-	1751	7	ISM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	4089	295	4089	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAGGGTTTCTCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	54810926	54805223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848
ENSMUSG00000022178.12_54805997_54814443_1	chr14	-	1757	8	FSM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	572	1068	572	-1068	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCACGGGATCCTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	54814443	54805996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
ENSMUSG00000022178.12_54806343_54814787_1	chr14	-	1755	8	FSM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	228	1414	228	-1414	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCGGAGGCAAGGAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	54814787	54806342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
ENSMUSG00000022178.12_54806947_54815015_1	chr14	-	1798	7	ISM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	0	2018	0	-2018	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCACTGTGAGGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	54815015	54806946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
ENSMUSG00000022179.6_54821733_54828889_1	chr14	-	1021	5	ISM	ENSMUSG00000022179.6	ENST00000397382.8	1898	7	14519	-8	14519	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGGCTCCTCCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	54828889	54821732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54822164_54822435_54822549_54823108_54823213_54823392_54823455_54828578
ENSMUSG00000022179.6_54822121_54832876_1	chr14	-	943	6	ISM	ENSMUSG00000022179.6	ENST00000397382.8	1898	7	10532	380	10532	-380	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACCAGCACCTGTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	54832876	54822120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54822164_54822435_54822549_54823108_54823213_54823392_54823455_54828578_54828890_54832566
ENSMUSG00000022179.6_54822481_54833011_1	chr14	-	990	5	ISM	ENSMUSG00000022179.6	ENST00000397382.8	1898	7	10397	740	10397	-740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAGGAGAAAGAGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	54833011	54822480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54822549_54823108_54823213_54823392_54823455_54828578_54828890_54832566
ENSMUSG00000022179.6_54823145_54833119_1	chr14	-	994	4	ISM	ENSMUSG00000022179.6	ENST00000397382.8	1898	7	10289	1404	10289	-1404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCCCCCACAATTACACA	NA	NA	NA	NA	NA	NA	NA	NA	54833119	54823144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54823213_54823392_54823455_54828578_54828890_54832566
ENSMUSG00000022179.6_54823393_54833303_1	chr14	-	1110	3	ISM	ENSMUSG00000022179.6	ENST00000397382.8	1898	7	10105	1652	10105	-1652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGGTTTCTTGGGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	54833303	54823392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54823455_54828578_54828890_54832566
ENSMUSG00000022179.6_54828650_54843298_1	chr14	-	1015	3	ISM	ENSMUSG00000022179.6	ENST00000397382.8	1898	7	110	6909	110	-6909	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTCCCCATGCAGGATC	NA	NA	NA	NA	NA	NA	NA	NA	54843298	54828649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54828890_54832566_54833303_54843259
ENSMUSG00000022179.6_54828706_54843344_1	chr14	-	1005	3	ISM	ENSMUSG00000022179.6	ENST00000397382.8	1898	7	64	6965	64	-6965	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGACGAGTCAGGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	54843344	54828705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54828890_54832566_54833303_54843259
ENSMUSG00000022179.6_54828763_54843450_1	chr14	-	1054	3	ISM	ENSMUSG00000022179.6	ENST00000397382.8	1898	7	-42	7022	0	-7022	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGCCCGCAACGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	54843450	54828762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54828890_54832566_54833303_54843259
ENSMUSG00000022180.8_54959666_54997068_1	chr14	-	2546	5	ISM	ENSMUSG00000022180.8	ENST00000469263.5	3304	6	22199	-7	-21944	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATGGAGTTAATAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	54997068	54959665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54961709_54973180_54973335_54974996_54975123_54995895_54996048_54996997
ENSMUSG00000022180.8_54959801_54997105_1	chr14	-	2446	5	NNC	ENSMUSG00000022180.8	novel	3304	6	NA	NA	-21981	-128	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGTATGGCGGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	54997105	54959800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_54961709_54973180_54973335_54974996_54975123_54995897_54996048_54996997
ENSMUSG00000022180.8_54959824_54997147_1	chr14	-	2467	5	ISM	ENSMUSG00000022180.8	ENST00000469263.5	3304	6	22120	151	-22023	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTCTATTTCTTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	54997147	54959823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54961709_54973180_54973335_54974996_54975123_54995895_54996048_54996997
ENSMUSG00000022180.8_54959860_54997165_1	chr14	-	2447	5	NNC	ENSMUSG00000022180.8	novel	3304	6	NA	NA	-22041	-187	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCTTACTTTTTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	54997165	54959859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_54961709_54973180_54973335_54974996_54975123_54995897_54996048_54996997
ENSMUSG00000022180.8_54959879_54997195_1	chr14	-	2460	5	ISM	ENSMUSG00000022180.8	ENST00000469263.5	3304	6	22072	206	-22071	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTTTTTTTTTAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	54997195	54959878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54961709_54973180_54973335_54974996_54975123_54995895_54996048_54996997
ENSMUSG00000022180.8_54960223_55018971_1	chr14	-	2458	6	FSM	ENSMUSG00000022180.8	ENST00000469263.5	3304	6	296	550	296	-550	multi-exon	FALSE	canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGTGACAGTGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	55018971	54960222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_54961709_54973180_54973335_54974996_54975123_54995895_54996048_54996997_54997203_55018636
ENSMUSG00000022180.8_54960285_55019024_1	chr14	-	2449	6	FSM	ENSMUSG00000022180.8	ENST00000469263.5	3304	6	243	612	243	-612	multi-exon	FALSE	canonical	NA	NA	NA	NA	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGACTTTGGAGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	55019024	54960284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_54961709_54973180_54973335_54974996_54975123_54995895_54996048_54996997_54997203_55018636
ENSMUSG00000022180.8_54960336_55019074_1	chr14	-	2448	6	FSM	ENSMUSG00000022180.8	ENST00000469263.5	3304	6	193	663	193	-663	multi-exon	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACCCTACCACCGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	55019074	54960335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_54961709_54973180_54973335_54974996_54975123_54995895_54996048_54996997_54997203_55018636
ENSMUSG00000022184.9_3994927_4008908_1	chr15	-	1411	7	NNC	ENSMUSG00000022184.9	novel	1407	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCATGGTCTCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4008908	3994926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_3995275_3998388_3998565_4000818_4000990_4001110_4001187_4005238_4005460_4007245_4007480_4008723
ENSMUSG00000022184.9_3994927_4008908_2	chr15	-	1418	7	FSM	ENSMUSG00000022184.9	ENSMUST00000022791.9	1565	7	147	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCATGGTCTCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4008908	3994926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_3995275_3998388_3998565_4000818_4000995_4001110_4001187_4005238_4005460_4007243_4007480_4008723
ENSMUSG00000022184.9_3994927_4009055_1	chr15	-	1558	7	NNC	ENSMUSG00000022184.9	novel	1565	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCATGGTCTCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4009055	3994926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_3995275_3998388_3998565_4000818_4000990_4001110_4001187_4005238_4005460_4007245_4007480_4008723
ENSMUSG00000022185.20_54879624_54889244_1	chr14	-	2210	11	ISM	ENSMUSG00000022185.20	ENSMUST00000126166.8	2369	12	1829	6	1452	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATTTGAGTGCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	54889244	54879623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173
ENSMUSG00000022185.20_54881492_54902488_1	chr14	-	2199	12	ISM	ENSMUSG00000022185.20	ENSMUST00000111484.9	4048	18	21900	1307	-11330	-1307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCGAGAGGGACCCCG	NA	NA	NA	NA	NA	NA	NA	NA	54902488	54881491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828
ENSMUSG00000022186.15_4055879_4184826_1	chr15	+	3508	17	NNC	ENSMUSG00000022186.15	novel	3527	17	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTGTGTGTCCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	4055878	4184826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122003_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ENSMUSG00000022186.15_4055879_4184826_2	chr15	+	3507	17	NNC	ENSMUSG00000022186.15	novel	3527	17	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTGTGTGTCCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	4055878	4184826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089473_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ENSMUSG00000022186.15_4055879_4184826_3	chr15	+	3508	17	NNC	ENSMUSG00000022186.15	novel	3527	17	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTGTGTGTCCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	4055878	4184826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087155_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ENSMUSG00000022186.15_4055879_4184826_4	chr15	+	3508	17	NNC	ENSMUSG00000022186.15	novel	3527	17	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1836	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTGTGTGTCCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	4055878	4184826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130613_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ENSMUSG00000022186.15_4055879_4184826_5	chr15	+	3506	17	NNC	ENSMUSG00000022186.15	novel	3527	17	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1083	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTGTGTGTCCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	4055878	4184826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120656_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ENSMUSG00000022186.15_4055879_4184826_6	chr15	+	3507	17	NNC	ENSMUSG00000022186.15	novel	3527	17	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1915	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTGTGTGTCCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	4055878	4184826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089423_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ENSMUSG00000022193.8_54851713_54854036_1	chr14	-	291	2	ISM	ENSMUSG00000022193.8	ENSMUST00000022803.6	899	3	1443	137	1418	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGTGTCCAGTGACAATG	NA	NA	NA	NA	NA	NA	NA	NA	54854036	54851712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54851939_54853971
ENSMUSG00000022193.8_54851713_54854242_1	chr14	-	566	2	ISM	ENSMUSG00000022193.8	ENST00000493471.2	884	3	1212	78	1212	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGTGTCCAGTGACAATG	NA	NA	NA	NA	NA	NA	NA	NA	54854242	54851712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54851939_54853902
ENSMUSG00000022193.8_54851790_54854242_1	chr14	-	420	2	ISM	ENSMUSG00000022193.8	ENSMUST00000022803.6	899	3	1237	214	1212	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTACCAAGCCACCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	54854242	54851789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54851939_54853971
ENSMUSG00000022193.8_54851817_54855268_1	chr14	-	516	3	FSM	ENSMUSG00000022193.8	ENST00000493471.2	884	3	186	182	186	-182	multi-exon	FALSE	canonical	NA	NA	NA	NA	2019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCTATGATCTGGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	54855268	54851816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_54851939_54853902_54854279_54855250
ENSMUSG00000022193.8_54851871_54855325_1	chr14	-	519	3	FSM	ENSMUSG00000022193.8	ENST00000493471.2	884	3	129	236	129	-236	multi-exon	FALSE	canonical	NA	NA	NA	NA	1985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATGCTTACGGCGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	54855325	54851870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_54851939_54853902_54854279_54855250
ENSMUSG00000022193.8_54854021_54855465_1	chr14	-	473	2	ISM	ENSMUSG00000022193.8	ENST00000493471.2	884	3	-11	2386	0	-2386	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGTCTATGGGCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	54855465	54854020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54854279_54855250
ENSMUSG00000022193.8_54854134_54855465_1	chr14	-	360	2	ISM	ENSMUSG00000022193.8	ENST00000493471.2	884	3	-11	2499	0	-2499	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGTTGTTGGCTCGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	54855465	54854133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54854279_54855250
ENSMUSG00000022200.9_12321524_12349956_1	chr15	+	1269	4	FSM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	-12	1395	-12	-1395	multi-exon	TRUE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTCCCACACTAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	12321523	12349956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12349453
ENSMUSG00000022200.9_12321721_12350162_1	chr15	+	1278	4	FSM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	185	1189	0	-1189	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGCCCCCACCTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	12321720	12350162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12349453
ENSMUSG00000022200.9_12339712_12350326_1	chr15	+	1122	3	ISM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	18176	1025	17991	-1025	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTGAGATGTATACTTA	NA	NA	NA	NA	NA	NA	NA	NA	12339711	12350326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_12339846_12343122_12343238_12349453
ENSMUSG00000022200.9_12339744_12350412_1	chr15	+	1176	3	ISM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	18208	939	18023	-939	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTTGTAAATCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	12339743	12350412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_12339846_12343122_12343238_12349453
ENSMUSG00000022200.9_12339800_12350467_1	chr15	+	1175	3	ISM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	18264	884	18079	-884	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATGGTCCAATTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	12339799	12350467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_12339846_12343122_12343238_12349453
ENSMUSG00000022200.9_12343214_12350618_1	chr15	+	1189	2	ISM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	21678	733	21493	-733	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCATTCATTGTTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	12343213	12350618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_12343238_12349453
ENSMUSG00000022201.17_12117945_12184320_1	chr15	+	3373	20	FSM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	28	1449	28	-1449	multi-exon	TRUE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGTTTCATGGAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	12117944	12184320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ENSMUSG00000022201.17_12136695_12184689_1	chr15	+	3340	18	ISM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	18778	1080	18778	-1080	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAACGTGAAACTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	12136694	12184689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ENSMUSG00000022201.17_12140599_12185005_1	chr15	+	3362	16	ISM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	22682	764	22682	-764	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGTTTAACACGTAGATC	NA	NA	NA	NA	NA	NA	NA	NA	12140598	12185005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ENSMUSG00000022201.17_12140616_12185005_1	chr15	+	3345	16	ISM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	22699	764	22699	-764	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGTTTAACACGTAGATC	NA	NA	NA	NA	NA	NA	NA	NA	12140615	12185005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ENSMUSG00000022201.17_12146400_12185268_1	chr15	+	3320	15	ISM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	28483	501	28483	-501	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATCATTTATAGGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	12146399	12185268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ENSMUSG00000022201.17_12149649_12185400_1	chr15	+	3334	14	ISM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	31732	369	31732	-369	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCTAATCCCCTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	12149648	12185400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ENSMUSG00000022201.17_12149742_12185554_1	chr15	+	3395	14	ISM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	31825	215	31825	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGGCTTGATGGTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	12149741	12185554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ENSMUSG00000022201.17_12150361_12185769_1	chr15	+	3444	13	ISM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	32444	0	32444	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGTCTATATTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	12150360	12185769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ENSMUSG00000022201.17_12150455_12185769_1	chr15	+	3350	13	ISM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	32538	0	32538	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGTCTATATTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	12150454	12185769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ENSMUSG00000022204.10_55258509_55260575_1	chr14	+	640	6	ISM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	5598	1019	5598	-1019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGAGCGCCATGAGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	55258508	55260575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506
ENSMUSG00000022204.10_55258637_55260663_1	chr14	+	600	6	ISM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	5726	931	5726	-931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGTAAGGTACGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	55258636	55260663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506
ENSMUSG00000022204.10_55259276_55261595_1	chr14	+	660	5	ISM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	6365	-1	6365	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTTTTGCCATACATT	NA	NA	NA	NA	NA	NA	NA	NA	55259275	55261595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
ENSMUSG00000022205.16_11984322_11993900_1	chr15	-	320	4	ISM	ENSMUSG00000022205.16	ENSMUST00000110504.2	675	5	3169	195	2244	-195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGTAAGAAAGCTGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	11993900	11984321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874
ENSMUSG00000022205.16_11984364_11996098_1	chr15	-	387	5	FSM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	46	2939	46	-237	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGAGCCAGCTGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	11996098	11984363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996036
ENSMUSG00000022205.16_11986540_11996098_1	chr15	-	369	4	ISM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	46	5115	46	-2413	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTTATTTCTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	11996098	11986539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_11986651_11991044_11991168_11993874_11993948_11996036
ENSMUSG00000022208.13_55344889_55346981_1	chr14	-	1203	2	ISM	ENSMUSG00000022208.13	ENSMUST00000124493.2	3200	5	6028	155	6028	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAGTCCTCAGCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	55346981	55344888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55345853_55346742
ENSMUSG00000022208.13_55344974_55347045_1	chr14	-	1182	2	ISM	ENSMUSG00000022208.13	ENSMUST00000124493.2	3200	5	5964	240	5964	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTTGTGGCCTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	55347045	55344973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55345853_55346742
ENSMUSG00000022208.13_55345091_55347187_1	chr14	-	1207	2	ISM	ENSMUSG00000022208.13	ENSMUST00000124493.2	3200	5	5822	357	5822	-357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATTGAGAAAAGCAACGAA	NA	NA	NA	NA	NA	NA	NA	NA	55347187	55345090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55345853_55346742
ENSMUSG00000022208.13_55345215_55347567_1	chr14	-	1205	3	ISM	ENSMUSG00000022208.13	ENSMUST00000124493.2	3200	5	5442	481	5442	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTTTGATCTTCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	55347567	55345214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55345853_55346742_55347276_55347533
ENSMUSG00000022208.13_55345272_55347614_1	chr14	-	1195	3	ISM	ENSMUSG00000022208.13	ENSMUST00000124493.2	3200	5	5395	538	5395	-538	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTGCAGGAAAAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	55347614	55345271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55345853_55346742_55347276_55347533
ENSMUSG00000022208.13_55345385_55350983_1	chr14	-	1240	4	ISM	ENSMUSG00000022208.13	ENSMUST00000124493.2	3200	5	2026	651	2026	-651	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAGGAATCTCCTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	55350983	55345384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55345853_55346742_55347276_55347533_55347653_55350863
ENSMUSG00000022208.13_55345468_55351039_1	chr14	-	1213	4	ISM	ENSMUSG00000022208.13	ENSMUST00000124493.2	3200	5	1970	734	1970	-734	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCAGACCATTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	55351039	55345467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55345853_55346742_55347276_55347533_55347653_55350863
ENSMUSG00000022208.13_55345585_55351141_1	chr14	-	1198	4	ISM	ENSMUSG00000022208.13	ENSMUST00000124493.2	3200	5	1868	851	1868	-851	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTCTGGTCTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	55351141	55345584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55345853_55346742_55347276_55347533_55347653_55350863
ENSMUSG00000022208.13_55346791_55351477_1	chr14	-	1218	3	ISM	ENSMUSG00000022208.13	ENSMUST00000124493.2	3200	5	1532	2057	1532	-2057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAGAGGTTGAGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	55351477	55346790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55347276_55347533_55347653_55350863
ENSMUSG00000022208.13_55346862_55351531_1	chr14	-	1201	3	ISM	ENSMUSG00000022208.13	ENSMUST00000124493.2	3200	5	1478	2128	1478	-2128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTCTGAGCCTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	55351531	55346861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55347276_55347533_55347653_55350863
ENSMUSG00000022208.13_55346915_55351586_1	chr14	-	1203	3	ISM	ENSMUSG00000022208.13	ENSMUST00000124493.2	3200	5	1423	2181	1423	-2181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAGGGGGAAGACGAAG	NA	NA	NA	NA	NA	NA	NA	NA	55351586	55346914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55347276_55347533_55347653_55350863
ENSMUSG00000022208.13_55347099_55352561_1	chr14	-	1277	4	ISM	ENSMUSG00000022208.13	ENSMUST00000124493.2	3200	5	448	2365	448	-2365	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGAACTGGGGCCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	55352561	55347098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55347276_55347533_55347653_55350863_55351636_55352352
ENSMUSG00000022208.13_55347211_55352614_1	chr14	-	1218	4	ISM	ENSMUSG00000022208.13	ENSMUST00000124493.2	3200	5	395	2477	395	-2477	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATACGAGAATGGACTGAC	NA	NA	NA	NA	NA	NA	NA	NA	55352614	55347210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55347276_55347533_55347653_55350863_55351636_55352352
ENSMUSG00000022208.13_55347627_55352768_1	chr14	-	1214	3	ISM	ENSMUSG00000022208.13	ENSMUST00000124493.2	3200	5	241	2893	241	-2893	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCCAGCAGCGTCGCG	NA	NA	NA	NA	NA	NA	NA	NA	55352768	55347626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55347653_55350863_55351636_55352352
ENSMUSG00000022208.13_55351067_55353236_1	chr14	-	1196	3	ISM	ENSMUSG00000022208.13	ENST00000397118.7	4244	7	787	6780	-227	-6333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGGCGCACCACCCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	55353236	55351066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55351636_55352352_55352903_55353159
ENSMUSG00000022208.13_55351225_55353556_1	chr14	-	1198	4	ISM	ENSMUSG00000022208.13	ENST00000397118.7	4244	7	467	6938	467	-6491	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCCCAATCCCAGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	55353556	55351224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55351636_55352352_55352903_55353159_55353288_55353447
ENSMUSG00000022208.13_55351278_55353608_1	chr14	-	1197	4	ISM	ENSMUSG00000022208.13	ENST00000397118.7	4244	7	415	6991	415	-6544	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGGTGAGCAGCGAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	55353608	55351277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55351636_55352352_55352903_55353159_55353288_55353447
ENSMUSG00000022208.13_55351387_55353721_1	chr14	-	1201	4	ISM	ENSMUSG00000022208.13	ENST00000397118.7	4244	7	302	7100	302	-6653	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGCACCCCAGCAGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	55353721	55351386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55351636_55352352_55352903_55353159_55353288_55353447
ENSMUSG00000022208.13_55352352_55354037_1	chr14	-	1269	3	ISM	ENSMUSG00000022208.13	ENST00000397118.7	4244	7	-14	8065	-14	-7618	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGGGCCCGGCCCACTAC	NA	NA	NA	NA	NA	NA	NA	NA	55354037	55352351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55352903_55353159_55353288_55353447
ENSMUSG00000022210.8_55716391_55727329_1	chr14	+	490	5	FSM	ENSMUSG00000022210.8	ENST00000397075.7	665	5	-17	192	-12	-192	multi-exon	FALSE	canonical	NA	NA	NA	NA	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCAGTTACATCAATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	55716390	55727329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55725616_55725673_55727275
ENSMUSG00000022210.8_55716391_55727391_1	chr14	+	604	6	FSM	ENSMUSG00000022210.8	ENST00000558263.5	728	6	-17	141	-12	-130	multi-exon	FALSE	canonical	NA	NA	NA	NA	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCAGAAACAGCCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	55716390	55727391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724716_55724769_55725616_55725673_55727275
ENSMUSG00000022210.8_55716391_55727797_1	chr14	+	1216	8	FSM	ENSMUSG00000022210.8	ENSMUST00000022821.8	1392	8	176	0	-12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGCGTGTTTATTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	55716390	55727797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549_55724621_55724716_55724769_55725040_55725176_55725616_55725673_55727275
ENSMUSG00000022210.8_55717482_55727391_1	chr14	+	448	4	NNC	ENSMUSG00000022210.8	novel	681	5	NA	NA	1074	-130	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCAGAAACAGCCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	55717481	55727391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_55717661_55723573_55723676_55725616_55725673_55727280
ENSMUSG00000022210.8_55717616_55727532_1	chr14	+	460	4	ISM	ENSMUSG00000022210.8	ENST00000397071.5	681	5	1213	0	1208	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCGAAGTGTGGTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	55717615	55727532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55717661_55723573_55723676_55725616_55725673_55727275
ENSMUSG00000022210.8_55717616_55727532_2	chr14	+	512	5	ISM	ENSMUSG00000022210.8	ENST00000558263.5	728	6	1208	0	1208	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCGAAGTGTGGTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	55717615	55727532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55717661_55723573_55723676_55724716_55724769_55725616_55725673_55727275
ENSMUSG00000022210.8_55723573_55727532_1	chr14	+	411	3	NNC	ENSMUSG00000022210.8	novel	681	5	NA	NA	7165	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCGAAGTGTGGTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	55723572	55727532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_55723676_55725616_55725673_55727280
ENSMUSG00000022211.10_55728630_55736098_1	chr14	+	1910	22	ISM	ENSMUSG00000022211.10	ENSMUST00000076236.7	4602	40	80	9627	80	-9618	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGGACATTGCAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	55728629	55736098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55728741_55730328_55730424_55730676_55730728_55730834_55730895_55730980_55731097_55731284_55731383_55731635_55731707_55731804_55731879_55732109_55732186_55732261_55732351_55732860_55732956_55733180_55733268_55733437_55733548_55733681_55733760_55734243_55734321_55734397_55734503_55734594_55734665_55735120_55735203_55735302_55735400_55735544_55735600_55735675_55735849_55736058
ENSMUSG00000022211.10_55730323_55736398_1	chr14	+	1928	22	ISM	ENSMUSG00000022211.10	ENSMUST00000076236.7	4602	40	1773	9327	1773	-9318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGGGTCACGTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	55730322	55736398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55730424_55730676_55730728_55730834_55730895_55730980_55731097_55731284_55731383_55731635_55731707_55731804_55731879_55732109_55732186_55732261_55732351_55732860_55732956_55733180_55733268_55733437_55733548_55733681_55733760_55734243_55734321_55734397_55734503_55734594_55734665_55735120_55735203_55735302_55735400_55735544_55735600_55735675_55735849_55736058_55736128_55736304
ENSMUSG00000022211.10_55730884_55736598_1	chr14	+	1826	21	ISM	ENSMUSG00000022211.10	ENSMUST00000076236.7	4602	40	2334	9127	2334	-9118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACACCTCCCTCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	55730883	55736598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55730895_55730980_55731097_55731284_55731383_55731635_55731707_55731804_55731879_55732109_55732186_55732261_55732351_55732860_55732956_55733180_55733268_55733437_55733548_55733681_55733760_55734243_55734321_55734397_55734503_55734594_55734665_55735120_55735203_55735302_55735400_55735544_55735600_55735675_55735849_55736058_55736128_55736304_55736399_55736499
ENSMUSG00000022211.10_55731029_55736973_1	chr14	+	1826	21	ISM	ENSMUSG00000022211.10	ENSMUST00000076236.7	4602	40	2479	8752	2479	-8743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGCCAGTGCAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	55731028	55736973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55731097_55731284_55731383_55731635_55731707_55731804_55731879_55732109_55732186_55732261_55732351_55732860_55732956_55733180_55733268_55733437_55733548_55733681_55733760_55734243_55734321_55734397_55734503_55734594_55734665_55735120_55735203_55735302_55735400_55735544_55735600_55735675_55735849_55736058_55736128_55736304_55736399_55736499_55736599_55736914
ENSMUSG00000022211.10_55731821_55737835_1	chr14	+	1843	20	ISM	ENSMUSG00000022211.10	ENSMUST00000076236.7	4602	40	3271	7890	3271	-7881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACGTGGCAGAACGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	55731820	55737835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55731879_55732109_55732186_55732261_55732351_55732860_55732956_55733180_55733268_55733437_55733548_55733681_55733760_55734243_55734321_55734397_55734503_55734594_55734665_55735120_55735203_55735302_55735400_55735544_55735600_55735675_55735849_55736058_55736128_55736304_55736399_55736499_55736599_55736914_55737044_55737208_55737323_55737749
ENSMUSG00000022211.10_55732261_55738776_1	chr14	+	1888	19	ISM	ENSMUSG00000022211.10	ENSMUST00000076236.7	4602	40	3711	6949	3711	-6940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAACAAGCCGAGCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	55732260	55738776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55732351_55732860_55732956_55733180_55733268_55733437_55733548_55733681_55733760_55734243_55734321_55734397_55734503_55734594_55734665_55735120_55735203_55735302_55735400_55735544_55735600_55735675_55735849_55736058_55736128_55736304_55736399_55736499_55736599_55736914_55737044_55737208_55737323_55737749_55737926_55738688
ENSMUSG00000022211.10_55733180_55739350_1	chr14	+	1903	19	ISM	ENSMUSG00000022211.10	ENSMUST00000076236.7	4602	40	4630	6375	4630	-6366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTTACAGCCACAGGC	NA	NA	NA	NA	NA	NA	NA	NA	55733179	55739350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55733268_55733437_55733548_55733681_55733760_55734243_55734321_55734397_55734503_55734594_55734665_55735120_55735203_55735302_55735400_55735544_55735600_55735675_55735849_55736058_55736128_55736304_55736399_55736499_55736599_55736914_55737044_55737208_55737323_55737749_55737926_55738688_55738777_55738915_55739051_55739286
ENSMUSG00000022211.10_55733682_55739890_1	chr14	+	1914	18	ISM	ENSMUSG00000022211.10	ENSMUST00000076236.7	4602	40	5132	5835	5132	-5826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTCCAACAGCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	55733681	55739890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55733760_55734243_55734321_55734397_55734503_55734594_55734665_55735120_55735203_55735302_55735400_55735544_55735600_55735675_55735849_55736058_55736128_55736304_55736399_55736499_55736599_55736914_55737044_55737208_55737323_55737749_55737926_55738688_55738777_55738915_55739051_55739286_55739351_55739681
ENSMUSG00000022211.10_55734263_55740419_1	chr14	+	1849	18	ISM	ENSMUSG00000022211.10	ENSMUST00000076236.7	4602	40	5713	5306	5713	-5297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCACCCGTCTAGATG	NA	NA	NA	NA	NA	NA	NA	NA	55734262	55740419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55734321_55734397_55734503_55734594_55734665_55735120_55735203_55735302_55735400_55735544_55735600_55735675_55735849_55736058_55736128_55736304_55736399_55736499_55736599_55736914_55737044_55737208_55737323_55737749_55737926_55738688_55738777_55738915_55739051_55739286_55739351_55739681_55739891_55740387
ENSMUSG00000022211.10_55734468_55741330_1	chr14	+	1827	18	ISM	ENSMUSG00000022211.10	ENSMUST00000076236.7	4602	40	5918	4395	5918	-4386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGCCACCGCTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	55734467	55741330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55734503_55734594_55734665_55735120_55735203_55735302_55735400_55735544_55735600_55735675_55735849_55736058_55736128_55736304_55736399_55736499_55736599_55736914_55737044_55737208_55737323_55737749_55737926_55738688_55738777_55738915_55739051_55739286_55739351_55739681_55739891_55740387_55740489_55741293
ENSMUSG00000022211.10_55735089_55741515_1	chr14	+	1939	16	ISM	ENSMUSG00000022211.10	ENSMUST00000076236.7	4602	40	6539	4210	6539	-4201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAACTCATCTCCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	55735088	55741515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55735203_55735302_55735400_55735544_55735600_55735675_55735849_55736058_55736128_55736304_55736399_55736499_55736599_55736914_55737044_55737208_55737323_55737749_55737926_55738688_55738777_55738915_55739051_55739286_55739351_55739681_55739891_55740387_55740489_55741293
ENSMUSG00000022211.10_55735750_55742890_1	chr14	+	1859	15	ISM	ENSMUSG00000022211.10	ENSMUST00000076236.7	4602	40	7200	2835	7200	-2826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCAGAAACGGCGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	55735749	55742890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55735849_55736058_55736128_55736304_55736399_55736499_55736599_55736914_55737044_55737208_55737323_55737749_55737926_55738688_55738777_55738915_55739051_55739286_55739351_55739681_55739891_55740387_55740489_55741293_55741610_55741924_55742057_55742856
ENSMUSG00000022211.10_55736083_55743104_1	chr14	+	1847	15	ISM	ENSMUSG00000022211.10	ENSMUST00000076236.7	4602	40	7533	2621	7533	-2612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGGCACATAGGTACGTAA	NA	NA	NA	NA	NA	NA	NA	NA	55736082	55743104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55736128_55736304_55736399_55736499_55736599_55736914_55737044_55737208_55737323_55737749_55737926_55738688_55738777_55738915_55739051_55739286_55739351_55739681_55739891_55740387_55740489_55741293_55741610_55741924_55742057_55742856_55742924_55743026
ENSMUSG00000022211.10_55736303_55744693_1	chr14	+	1935	15	ISM	ENSMUSG00000022211.10	ENSMUST00000076236.7	4602	40	7753	1032	7753	-1023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAAGCCAGAAGATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	55736302	55744693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55736399_55736499_55736599_55736914_55737044_55737208_55737323_55737749_55737926_55738688_55738777_55738915_55739051_55739286_55739351_55739681_55739891_55740387_55740489_55741293_55741610_55741924_55742057_55742856_55742924_55743026_55743117_55744574
ENSMUSG00000022211.10_55736498_55744890_1	chr14	+	1898	15	ISM	ENSMUSG00000022211.10	ENSMUST00000076236.7	4602	40	7948	835	7948	-826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGGGCCCCCCAGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	55736497	55744890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55736599_55736914_55737044_55737208_55737323_55737749_55737926_55738688_55738777_55738915_55739051_55739286_55739351_55739681_55739891_55740387_55740489_55741293_55741610_55741924_55742057_55742856_55742924_55743026_55743117_55744574_55744694_55744833
ENSMUSG00000022211.10_55736915_55745014_1	chr14	+	1921	14	ISM	ENSMUSG00000022211.10	ENSMUST00000076236.7	4602	40	8365	711	8365	-702	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGAGCCTTGGTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	55736914	55745014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55737044_55737208_55737323_55737749_55737926_55738688_55738777_55738915_55739051_55739286_55739351_55739681_55739891_55740387_55740489_55741293_55741610_55741924_55742057_55742856_55742924_55743026_55743117_55744574_55744694_55744833
ENSMUSG00000022211.10_55737208_55745253_1	chr14	+	1905	14	ISM	ENSMUSG00000022211.10	ENSMUST00000076236.7	4602	40	8658	472	8658	-463	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGGTGAGACACGTC	NA	NA	NA	NA	NA	NA	NA	NA	55737207	55745253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55737323_55737749_55737926_55738688_55738777_55738915_55739051_55739286_55739351_55739681_55739891_55740387_55740489_55741293_55741610_55741924_55742057_55742856_55742924_55743026_55743117_55744574_55744694_55744833_55745015_55745141
ENSMUSG00000022211.10_55737778_55745462_1	chr14	+	1847	14	ISM	ENSMUSG00000022211.10	ENST00000342740.6	4596	40	9240	254	9228	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACCCCTGCTCTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	55737777	55745462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55737926_55738688_55738777_55738915_55739051_55739286_55739351_55739681_55739891_55740387_55740489_55741293_55741610_55741924_55742057_55742856_55742924_55743026_55743117_55744574_55744694_55744833_55745015_55745141_55745253_55745376
ENSMUSG00000022211.10_55737850_55745529_1	chr14	+	1842	14	ISM	ENSMUSG00000022211.10	ENST00000342740.6	4596	40	9312	187	9300	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAGCAGGAGTGGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	55737849	55745529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55737926_55738688_55738777_55738915_55739051_55739286_55739351_55739681_55739891_55740387_55740489_55741293_55741610_55741924_55742057_55742856_55742924_55743026_55743117_55744574_55744694_55744833_55745015_55745141_55745253_55745376
ENSMUSG00000022211.10_55738915_55745721_1	chr14	+	1871	12	ISM	ENSMUSG00000022211.10	ENST00000342740.6	4596	40	10377	-5	10365	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGGTCTCTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	55738914	55745721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55739051_55739286_55739351_55739681_55739891_55740387_55740489_55741293_55741610_55741924_55742057_55742856_55742924_55743026_55743117_55744574_55744694_55744833_55745015_55745141_55745253_55745376
ENSMUSG00000022214.16_55798524_55803280_1	chr14	+	1086	11	ISM	ENSMUSG00000022214.16	ENST00000396941.8	2193	15	36	4062	0	-4062	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGCAAACAAACAAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	55798523	55803280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55798543_55798692_55798877_55800403_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093
ENSMUSG00000022214.16_55798773_55804425_1	chr14	+	1091	11	ISM	ENSMUSG00000022214.16	ENST00000396941.8	2193	15	285	2917	249	-2917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCACACAGCAAAACTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	55798772	55804425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55798877_55800403_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320
ENSMUSG00000022214.16_55798861_55804732_1	chr14	+	1080	12	ISM	ENSMUSG00000022214.16	ENST00000396941.8	2193	15	373	2610	337	-2610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCCTTGATGACCTACA	NA	NA	NA	NA	NA	NA	NA	NA	55798860	55804732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55798877_55800403_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704
ENSMUSG00000022214.16_55800828_55804857_1	chr14	+	1117	10	ISM	ENSMUSG00000022214.16	ENST00000396941.8	2193	15	2340	2485	2304	-2485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGATTTTGTGAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	55800827	55804857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704
ENSMUSG00000022214.16_55801848_55806846_1	chr14	+	1071	9	ISM	ENSMUSG00000022214.16	ENST00000396941.8	2193	15	3360	496	3324	-496	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGGTGAATTCTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	55801847	55806846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUSG00000022214.16_55803126_55807212_1	chr14	+	1096	5	ISM	ENSMUSG00000022214.16	ENST00000396941.8	2193	15	4638	130	4602	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGATTGGTGGCCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	55803125	55807212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUSG00000022214.16_55803191_55807263_1	chr14	+	1082	5	ISM	ENSMUSG00000022214.16	ENST00000396941.8	2193	15	4703	79	4667	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCGAGGGTGGACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	55803190	55807263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUSG00000022214.16_55803319_55807388_1	chr14	+	1143	5	NNC	ENSMUSG00000022214.16	novel	2538	15	NA	NA	4795	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACGGCCCAACTCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	55803318	55807388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_55803344_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUSG00000022214.16_55804319_55807388_1	chr14	+	1120	4	ISM	ENSMUSG00000022214.16	ENSMUST00000117701.8	2311	13	5795	0	5795	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACGGCCCAACTCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	55804318	55807388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUSG00000022217.15_55818979_55822668_1	chr14	-	764	5	FSM	ENSMUSG00000022217.15	ENSMUST00000022828.9	855	5	91	0	91	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATGTATTTATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	55822668	55818978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_55819201_55819337_55819433_55819512_55819583_55822135_55822213_55822368
ENSMUSG00000022221.15_56022454_56025849_1	chr14	-	1652	9	ISM	ENSMUSG00000022221.15	ENSMUST00000178399.3	1865	10	465	0	-367	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGTCTGAGGTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	56025849	56022453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694
ENSMUSG00000022221.15_56022623_56026245_1	chr14	-	1644	10	FSM	ENSMUSG00000022221.15	ENSMUST00000022830.14	1892	10	77	171	69	-169	multi-exon	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCATTCAGCGTGGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	56026245	56022622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694_56025839_56026073
ENSMUSG00000022221.15_56022713_56026249_1	chr14	-	1558	10	FSM	ENSMUSG00000022221.15	ENSMUST00000022830.14	1892	10	73	261	65	-259	multi-exon	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGTATGACCAAGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	56026249	56022712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694_56025839_56026073
ENSMUSG00000022221.15_56022763_56026314_1	chr14	-	1573	10	FSM	ENSMUSG00000022221.15	ENSMUST00000022830.14	1892	10	8	311	0	-309	multi-exon	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTACAACTCCTTGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	56026314	56022762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694_56025839_56026073
ENSMUSG00000022221.15_56024282_56025460_2	chr14	-	479	4	FSM	ENSMUSG00000022221.15	ENST00000216274.10	523	4	22	22	22	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAACTGAAGGAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	56025460	56024281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_56024376_56024570_56024618_56024738_56024897_56025280
ENSMUSG00000022223.10_56135016_56137372_1	chr14	-	816	4	NNC	ENSMUSG00000022223.10	novel	782	4	NA	NA	1	46	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAGAAGTGGGTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	56137372	56135015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_56135470_56135705_56135844_56136640_56136763_56137270
ENSMUSG00000022223.10_56135016_56137372_2	chr14	-	822	4	FSM	ENSMUSG00000022223.10	ENST00000555365.5	782	4	6	-46	1	46	multi-exon	FALSE	canonical	NA	NA	NA	NA	4056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAGAAGTGGGTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	56137372	56135015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137270
ENSMUSG00000022223.10_56135016_56137372_3	chr14	-	816	4	NNC	ENSMUSG00000022223.10	novel	782	4	NA	NA	1	46	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAGAAGTGGGTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	56137372	56135015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_56135470_56135699_56135844_56136646_56136763_56137270
ENSMUSG00000022223.10_56135293_56137372_1	chr14	-	506	4	FSM	ENSMUSG00000022223.10	ENST00000538105.6	738	4	1	231	1	-231	multi-exon	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGCTCCAGCATCTACA	NA	NA	NA	NA	NA	NA	NA	NA	56137372	56135292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_56135470_56135699_56135844_56137103_56137187_56137270
ENSMUSG00000022228.15_21629175_21632431_1	chr13	-	1029	3	ISM	ENSMUSG00000022228.15	ENSMUST00000110485.3	4366	6	5469	2825	5399	-2825	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGAAGCCTTCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	21632431	21629174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_21630000_21631955_21632065_21632336
ENSMUSG00000022234.16_31590946_31592613_1	chr15	-	439	2	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	9337	0	9337	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2092	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGCTTGATAGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	31592613	31590945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31591202_31592430
ENSMUSG00000022234.16_31591072_31592898_1	chr15	-	418	3	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	9052	126	9052	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACCATTTACCACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	31592898	31591071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31591202_31592430_31592612_31592791
ENSMUSG00000022234.16_31591150_31593073_1	chr15	-	432	4	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	8877	204	8877	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1554	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTGCCACCCAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	31593073	31591149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012
ENSMUSG00000022234.16_31592501_31593207_1	chr15	-	444	3	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	8743	1555	8743	-1555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCGAGCCAGACAGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	31593207	31592500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31592612_31592791_31592930_31593012
ENSMUSG00000022234.16_31592577_31593708_1	chr15	-	407	4	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	8242	1631	8242	-1631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	939	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGATGCCTTGGAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	31593708	31592576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31592612_31592791_31592930_31593012_31593199_31593660
ENSMUSG00000022234.16_31592879_31594288_1	chr15	-	403	4	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	7662	1933	7662	-1933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCATCCGTGACAACCG	NA	NA	NA	NA	NA	NA	NA	NA	31594288	31592878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31592930_31593012_31593199_31593660_31593781_31594242
ENSMUSG00000022234.16_31592908_31594370_1	chr15	-	456	4	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	7580	1962	7580	-1962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1775	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCATGATGCCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	31594370	31592907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31592930_31593012_31593199_31593660_31593781_31594242
ENSMUSG00000022234.16_31593074_31594512_1	chr15	-	428	4	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	7438	2128	7438	-2128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1531	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCGAGAAGTGTAAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	31594512	31593073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31593199_31593660_31593781_31594242_31594393_31594479
ENSMUSG00000022234.16_31593131_31594557_1	chr15	-	416	4	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	7393	2185	7393	-2185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGGTGTGGTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	31594557	31593130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31593199_31593660_31593781_31594242_31594393_31594479
ENSMUSG00000022234.16_31593178_31594674_1	chr15	-	486	4	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	7276	2232	7276	-2232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2004	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGGATTGTCCCACGGTT	NA	NA	NA	NA	NA	NA	NA	NA	31594674	31593177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31593199_31593660_31593781_31594242_31594393_31594479
ENSMUSG00000022234.16_31593734_31595836_1	chr15	-	436	4	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	6114	2788	6114	-2788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1562	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATGAAGCCAATCACTTAC	NA	NA	NA	NA	NA	NA	NA	NA	31595836	31593733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31593781_31594242_31594393_31594479_31594673_31595790
ENSMUSG00000022234.16_31594295_31595914_1	chr15	-	415	3	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	6036	3349	6036	-3349	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1515	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGCCCTGCAGAAGTACG	NA	NA	NA	NA	NA	NA	NA	NA	31595914	31594294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31594393_31594479_31594673_31595790
ENSMUSG00000022234.16_31594491_31597675_1	chr15	-	500	3	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	4275	3545	4275	-3545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCCGAAAGTGAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	31597675	31594490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31594673_31595790_31595990_31597556
ENSMUSG00000022234.16_31595860_31601782_1	chr15	-	392	4	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	168	4914	168	-4914	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCTTGTCGACATAAACA	NA	NA	NA	NA	NA	NA	NA	NA	31601782	31595859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31595990_31597556_31597722_31598145_31598207_31601746
ENSMUSG00000022234.16_31595896_31601886_1	chr15	-	460	4	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	64	4950	64	-4950	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGCAATACAACACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	31601886	31595895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31595990_31597556_31597722_31598145_31598207_31601746
ENSMUSG00000022234.16_31595957_31601887_1	chr15	-	400	4	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	63	5011	63	-5011	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	902	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCTGGACCGAGGCATC	NA	NA	NA	NA	NA	NA	NA	NA	31601887	31595956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31595990_31597556_31597722_31598145_31598207_31601746
ENSMUSG00000022236.11_31441357_31451251_1	chr15	-	532	4	ISM	ENSMUSG00000022236.11	ENSMUST00000110408.3	957	5	2632	0	2632	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGAGTTTTTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	31451251	31441356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31441527_31443437_31443614_31449109_31449272_31451227
ENSMUSG00000022236.11_31441457_31451300_1	chr15	-	481	4	ISM	ENSMUSG00000022236.11	ENSMUST00000110408.3	957	5	2583	100	2583	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGAGAAAGCTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	31451300	31441456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31441527_31443437_31443614_31449109_31449272_31451227
ENSMUSG00000022236.11_31443464_31453606_1	chr15	-	484	4	ISM	ENSMUSG00000022236.11	ENSMUST00000110408.3	957	5	277	2107	277	-2107	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTACCAGTTTAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	31453606	31443463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31443614_31449109_31449272_31451227_31451352_31453558
ENSMUSG00000022236.11_31443552_31453723_1	chr15	-	513	4	ISM	ENSMUSG00000022236.11	ENSMUST00000110408.3	957	5	160	2195	160	-2195	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCGCATCCCCTTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	31453723	31443551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31443614_31449109_31449272_31451227_31451352_31453558
ENSMUSG00000022236.11_31449218_31453883_1	chr15	-	503	3	ISM	ENSMUSG00000022236.11	ENSMUST00000110408.3	957	5	0	7861	0	-7861	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGCCTGCCAGTAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	31453883	31449217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31449272_31451227_31451352_31453558
ENSMUSG00000022237.18_31297602_31325395_1	chr15	-	751	2	ISM	ENSMUSG00000022237.18	ENST00000529293.1	1117	3	42054	135	42054	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCCACTCCTGCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	31325395	31297601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_31298131_31325173
ENSMUSG00000022237.18_31297713_31367271_1	chr15	-	693	3	FSM	ENSMUSG00000022237.18	ENST00000529293.1	1117	3	178	246	178	-246	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAACGCCCAAGCGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	31367271	31297712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_31298131_31325173_31325362_31367184
ENSMUSG00000022237.18_31297713_31367342_1	chr15	-	764	3	FSM	ENSMUSG00000022237.18	ENST00000529293.1	1117	3	107	246	107	-246	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAACGCCCAAGCGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	31367342	31297712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_31298131_31325173_31325362_31367184
ENSMUSG00000022237.18_31297827_31367380_1	chr15	-	688	3	FSM	ENSMUSG00000022237.18	ENST00000529293.1	1117	3	69	360	69	-360	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCTACAGTCCCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	31367380	31297826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_31298131_31325173_31325362_31367184
ENSMUSG00000022240.11_30480942_31027847_1	chr15	+	2778	18	FSM	ENSMUSG00000022240.11	ENST00000503622.5	2903	18	16	109	16	-109	multi-exon	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCATGTGCATGCATACA	NA	NA	NA	NA	NA	NA	NA	NA	30480941	31027847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_30481041_30619367_30619400_30619968_30620086_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ENSMUSG00000022240.11_30619967_31027956_1	chr15	+	2758	16	ISM	ENSMUSG00000022240.11	ENST00000503622.5	2903	18	139041	0	139041	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAAGGCTGTGATAACC	NA	NA	NA	NA	NA	NA	NA	NA	30619966	31027956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_30620086_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ENSMUSG00000022241.7_11382387_11388304_1	chr15	-	2469	7	ISM	ENSMUSG00000022241.7	ENST00000455217.6	2179	18	9028	-1723	9028	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTGACTCCAGAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	11388304	11382386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166
ENSMUSG00000022241.7_11382506_11388410_1	chr15	-	2377	8	ISM	ENSMUSG00000022241.7	ENST00000455217.6	2179	18	8922	-1604	8922	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAGGTGTTAAATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	11388410	11382505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383
ENSMUSG00000022241.7_11382543_11388474_1	chr15	-	2404	8	ISM	ENSMUSG00000022241.7	ENST00000455217.6	2179	18	8858	-1567	8858	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATGGAACTGATAACGT	NA	NA	NA	NA	NA	NA	NA	NA	11388474	11382542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383
ENSMUSG00000022241.7_11382667_11389678_1	chr15	-	2369	9	ISM	ENSMUSG00000022241.7	ENST00000455217.6	2179	18	7654	-1443	7654	-280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTTATTGAAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	11389678	11382666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661
ENSMUSG00000022241.7_11382712_11389743_1	chr15	-	2389	9	ISM	ENSMUSG00000022241.7	ENST00000455217.6	2179	18	7589	-1398	7589	-325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGTGTGTCAGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	11389743	11382711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661
ENSMUSG00000022241.7_11382770_11390493_1	chr15	-	2512	10	ISM	ENSMUSG00000022241.7	ENST00000455217.6	2179	18	6839	-1340	6839	-383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGCCTTTCAGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	11390493	11382769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397
ENSMUSG00000022241.7_11382881_11390493_1	chr15	-	2401	10	ISM	ENSMUSG00000022241.7	ENST00000455217.6	2179	18	6839	-1229	6839	-494	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCAGATGAATGCTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	11390493	11382880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397
ENSMUSG00000022241.7_11383023_11391254_1	chr15	-	2370	11	ISM	ENSMUSG00000022241.7	ENST00000455217.6	2179	18	6078	-1087	6078	-636	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGGCTTGGAATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	11391254	11383022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146
ENSMUSG00000022241.7_11383167_11392120_1	chr15	-	2409	13	ISM	ENSMUSG00000022241.7	ENST00000455217.6	2179	18	5212	-943	5212	-780	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTGTGTTGTAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	11392120	11383166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055
ENSMUSG00000022241.7_11383353_11392904_1	chr15	-	2373	15	ISM	ENSMUSG00000022241.7	ENST00000455217.6	2179	18	4428	-757	4428	757	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGGGCGTCAGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	11392904	11383352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872
ENSMUSG00000022241.7_11383386_11392972_1	chr15	-	2408	15	ISM	ENSMUSG00000022241.7	ENST00000455217.6	2179	18	4360	-724	4360	724	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTACACTGTAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	11392972	11383385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872
ENSMUSG00000022241.7_11383535_11393337_1	chr15	-	2376	16	ISM	ENSMUSG00000022241.7	ENST00000455217.6	2179	18	3995	-575	3995	575	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGGAAGACTATTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	11393337	11383534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242
ENSMUSG00000022241.7_11383748_11397347_1	chr15	-	2464	18	ISM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	2404	1361	-15	362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGACCTCTGTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	11397347	11383747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266
ENSMUSG00000022241.7_11383892_11399687_1	chr15	-	2436	19	FSM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	64	1505	64	218	multi-exon	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGATCCAAAAATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	11399687	11383891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ENSMUSG00000022241.7_11383964_11399687_1	chr15	-	2364	19	FSM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	64	1577	64	146	multi-exon	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAATGTTGTAGATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	11399687	11383963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ENSMUSG00000022241.7_11384091_11399751_1	chr15	-	2301	19	FSM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	0	1704	0	19	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCTGTGCCCGAGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	11399751	11384090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ENSMUSG00000022244.8_10981842_10996712_1	chr15	+	2570	5	NNC	ENSMUSG00000022244.8	novel	2577	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAATCACCAATGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	10981841	10996712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_10982140_10983435_10983580_10984771_10984933_10988851_10989032_10994925
ENSMUSG00000022246.15_10569607_10575091_1	chr15	-	2164	4	ISM	ENSMUSG00000022246.15	ENSMUST00000090339.11	4909	18	138535	552	138535	-552	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCCATGGTGAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	10575091	10569606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397
ENSMUSG00000022247.13_10475026_10476978_1	chr15	-	1743	2	ISM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	9055	161	9055	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGCAGCATGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	10476978	10475025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_10476683_10476892
ENSMUSG00000022247.13_10475166_10479029_1	chr15	-	1799	4	ISM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	7004	301	7004	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	NA	NA	NA	NA	NA	NA	NA	NA	10479029	10475165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978
ENSMUSG00000022247.13_10475333_10479688_1	chr15	-	1778	7	ISM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	6345	468	6345	-468	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTTTGAAAAACAAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	10479688	10475332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666
ENSMUSG00000022247.13_10475534_10483449_1	chr15	-	1739	9	ISM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	2584	669	2584	-669	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGGTGAGCTTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	10483449	10475533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380
ENSMUSG00000022247.13_10475719_10485973_1	chr15	-	1750	10	FSM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	60	854	60	-854	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGTTGCACAGAGACGT	NA	NA	NA	NA	NA	NA	NA	NA	10485973	10475718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
ENSMUSG00000022248.15_10486166_10493449_1	chr15	+	1126	6	FSM	ENSMUSG00000022248.15	ENSMUST00000022856.15	1514	6	62	326	11	-326	multi-exon	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTTCACGAGACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	10486165	10493449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_10486351_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
ENSMUSG00000022248.15_10486695_10493775_1	chr15	+	1111	5	ISM	ENSMUSG00000022248.15	ENSMUST00000022856.15	1514	6	591	0	540	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTACTGTCCTGTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	10486694	10493775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
ENSMUSG00000022253.18_9083352_9109076_1	chr15	+	1658	11	FSM	ENSMUSG00000022253.18	ENST00000282512.7	1932	11	2	272	2	-272	multi-exon	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATTAATTTCCATAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	9083351	9109076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ENSMUSG00000022253.18_9083367_9109165_1	chr15	+	1732	11	FSM	ENSMUSG00000022253.18	ENST00000282512.7	1932	11	17	183	17	-183	multi-exon	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAAGGATTAGAAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	9083366	9109165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ENSMUSG00000022253.18_9083416_9109217_1	chr15	+	1735	11	FSM	ENSMUSG00000022253.18	ENST00000282512.7	1932	11	66	131	66	-131	multi-exon	FALSE	canonical	NA	NA	NA	NA	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGACCCTTCCTTTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	9083415	9109217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ENSMUSG00000022253.18_9085880_9108446_1	chr15	+	673	8	NNC	ENSMUSG00000022253.18	novel	744	8	NA	NA	64	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGTCCTCAGGCGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	9085879	9108446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_9085887_9091254_9091339_9092802_9092940_9096110_9096182_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ENSMUSG00000022253.18_9085880_9108446_2	chr15	+	675	8	NNC	ENSMUSG00000022253.18	novel	744	8	NA	NA	64	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGTCCTCAGGCGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	9085879	9108446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_9085887_9091254_9091333_9092802_9092940_9096102_9096182_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ENSMUSG00000022253.18_9085880_9108446_3	chr15	+	681	8	FSM	ENSMUSG00000022253.18	ENST00000617628.4	744	8	64	-1	64	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGTCCTCAGGCGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	9085879	9108446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ENSMUSG00000022253.18_9092798_9109348_1	chr15	+	1591	7	NNC	ENSMUSG00000022253.18	novel	1934	11	NA	NA	6982	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGATGAACAGCTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	9092797	9109348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108308
ENSMUSG00000022255.17_34083182_34099731_1	chr15	+	480	2	ISM	ENSMUSG00000022255.17	ENST00000519934.5	2171	11	-39	41746	-39	-41746	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCTTGGGAACGCATAT	NA	NA	NA	NA	NA	NA	NA	NA	34083181	34099731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34083560_34099629
ENSMUSG00000022255.17_34083307_34114237_1	chr15	+	423	3	ISM	ENSMUSG00000022255.17	ENST00000519934.5	2171	11	86	27240	86	-27240	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAGTTGATGAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	34083306	34114237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34083560_34099629_34099732_34114169
ENSMUSG00000022255.17_34083454_34115121_1	chr15	+	470	4	ISM	ENSMUSG00000022255.17	ENST00000519934.5	2171	11	233	26356	233	-26356	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATATTAGTGGAACATAAG	NA	NA	NA	NA	NA	NA	NA	NA	34083453	34115121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944
ENSMUSG00000022255.17_34115088_34123912_1	chr15	+	430	4	ISM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	32223	21858	31867	-17565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTCCTTTTAAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34115087	34123912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34115122_34116456_34116523_34118025_34118257_34123813
ENSMUSG00000022255.17_34123889_34139921_1	chr15	+	433	5	ISM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	41024	5849	40668	-1556	internal_fragment	TRUE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATCTATTACCTTATCAA	NA	NA	NA	NA	NA	NA	NA	NA	34123888	34139921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886
ENSMUSG00000022255.17_34134435_34140856_1	chr15	+	427	4	ISM	ENSMUSG00000022255.17	ENST00000519934.5	2171	11	51214	621	51214	-621	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATCTCCAAAACAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	34134434	34140856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34134545_34136832_34136974_34139886_34140044_34140837
ENSMUSG00000022257.5_34238174_34284448_1	chr15	+	1894	7	NNC	ENSMUSG00000022257.5	novel	1902	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGTGGCTCCGCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	34238173	34284448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_34238569_34258826_34258939_34272489_34272564_34273373_34273497_34276289_34276381_34277577_34277674_34283445
ENSMUSG00000022257.5_34238174_34284448_2	chr15	+	1895	7	NNC	ENSMUSG00000022257.5	novel	1902	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGTGGCTCCGCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	34238173	34284448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_34238562_34258826_34258939_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34277674_34283445
ENSMUSG00000022261.7_32920869_33035081_1	chr15	+	3520	5	NNC	ENSMUSG00000022261.7	novel	3527	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGTGTGAGTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	32920868	33035081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_32921452_33017254_33017360_33023794_33023932_33028192_33028329_33032522
ENSMUSG00000022261.7_32921381_33033319_1	chr15	+	1145	4	FSM	ENSMUSG00000022261.7	ENST00000518385.5	1143	4	1	-3	1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAATTAATGTGTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	32921380	33033319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_32921456_33023794_33023932_33028192_33028329_33032522
ENSMUSG00000022263.11_27732701_27733651_1	chr15	-	476	2	ISM	ENSMUSG00000022263.11	ENST00000344135.5	4016	10	13925	1963	13925	-1963	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCAAAGGCACGGGCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	27733651	27732700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_27733117_27733591
ENSMUSG00000022263.11_27732862_27735498_1	chr15	-	428	3	ISM	ENSMUSG00000022263.11	ENST00000344135.5	4016	10	12078	2124	12078	-2124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTGCCGGCTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	27735498	27732861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_27733117_27733591_27733731_27735464
ENSMUSG00000022263.11_27732922_27735563_1	chr15	-	433	3	ISM	ENSMUSG00000022263.11	ENST00000344135.5	4016	10	12013	2184	12013	-2184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGCTGCTCAGCGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	27735563	27732921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_27733117_27733591_27733731_27735464
ENSMUSG00000022263.11_27733062_27736608_1	chr15	-	471	4	ISM	ENSMUSG00000022263.11	ENST00000344135.5	4016	10	10968	2324	10968	-2324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGAGACGCTGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	27736608	27733061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_27733117_27733591_27733731_27735464_27735666_27736532
ENSMUSG00000022263.11_27733636_27740733_1	chr15	-	448	4	ISM	ENSMUSG00000022263.11	ENST00000344135.5	4016	10	6843	2898	6843	-2898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGATACCTTCACAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	27740733	27733635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_27733731_27735464_27735666_27736532_27736612_27740660
ENSMUSG00000022263.11_27736553_27742540_1	chr15	-	455	5	ISM	ENSMUSG00000022263.11	ENST00000344135.5	4016	10	5036	5815	5036	-5815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGGCTGAGCTTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	27742540	27736552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_27736612_27740660_27740783_27741001_27741165_27741337_27741366_27742457
ENSMUSG00000022263.11_27741076_27744250_1	chr15	-	468	4	ISM	ENSMUSG00000022263.11	ENST00000344135.5	4016	10	3326	10338	3326	-10338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCCTCAATCACCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	27744250	27741075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_27741165_27741337_27741366_27742457_27742597_27744038
ENSMUSG00000022263.11_27742475_27747162_1	chr15	-	474	3	ISM	ENSMUSG00000022263.11	ENST00000344135.5	4016	10	414	11737	414	-11737	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGTATCTGTGAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	27747162	27742474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_27742597_27744038_27744287_27747058
ENSMUSG00000022263.11_27744133_27747344_1	chr15	-	440	2	ISM	ENSMUSG00000022263.11	ENST00000344135.5	4016	10	232	13395	232	-13395	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACCAGTGCCCCGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	27747344	27744132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_27744287_27747058
ENSMUSG00000022263.11_27744180_27747399_1	chr15	-	448	2	ISM	ENSMUSG00000022263.11	ENST00000344135.5	4016	10	177	13442	177	-13442	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGCCAGCAACCAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	27747399	27744179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_27744287_27747058
ENSMUSG00000022265.8_27466763_27593566_1	chr15	+	2069	12	FSM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	0	1429	0	-1429	multi-exon	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGCCTCTTGGTCAACG	NA	NA	NA	NA	NA	NA	NA	NA	27466762	27593566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ENSMUSG00000022265.8_27466912_27593690_1	chr15	+	2044	12	FSM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	149	1305	149	-1305	multi-exon	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTGACTTGCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	27466911	27593690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ENSMUSG00000022265.8_27544354_27593955_1	chr15	+	2018	11	ISM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	77591	1040	77591	-1040	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTCCCGCAAGTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	27544353	27593955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ENSMUSG00000022265.8_27553773_27594133_1	chr15	+	1998	10	ISM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	87010	862	87010	-862	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCCTAATGCCAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	27553772	27594133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ENSMUSG00000022265.8_27553861_27594248_1	chr15	+	2025	10	ISM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	87098	747	87098	-747	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTTATAAACAGTATCAA	NA	NA	NA	NA	NA	NA	NA	NA	27553860	27594248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ENSMUSG00000022265.8_27557320_27594365_1	chr15	+	2039	9	ISM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	90557	630	90557	-630	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATGGACACAGTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	27557319	27594365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ENSMUSG00000022265.8_27562840_27594395_1	chr15	+	2025	8	ISM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	96077	600	96077	-600	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTCAAAGTAACTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	27562839	27594395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ENSMUSG00000022265.8_27562896_27594538_1	chr15	+	2112	8	ISM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	96133	457	96133	-457	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAGTGATTGCCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	27562895	27594538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ENSMUSG00000022265.8_27567623_27594692_1	chr15	+	2024	6	ISM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	100860	303	100860	-303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTGTAGACAGGCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	27567622	27594692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ENSMUSG00000022265.8_27571580_27594871_1	chr15	+	2197	5	ISM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	104817	124	104817	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGCTTCCGTAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	27571579	27594871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ENSMUSG00000022265.8_27590518_27594995_1	chr15	+	2071	4	ISM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	123755	0	123755	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTATTTTCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	27590517	27594995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_27590559_27591003_27591128_27591522_27591623_27593189
ENSMUSG00000022270.17_25843586_25933539_1	chr15	+	334	4	ISM	ENSMUSG00000022270.17	ENST00000682229.1	3188	10	167	40201	167	-38884	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGAGGTGAGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	25843585	25933539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_25843699_25889566_25889674_25895198_25895230_25933456
ENSMUSG00000022270.17_25843654_25933572_1	chr15	+	299	4	ISM	ENSMUSG00000022270.17	ENST00000682229.1	3188	10	235	40168	235	-38851	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCTCAGGTGATCAATA	NA	NA	NA	NA	NA	NA	NA	NA	25843653	25933572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_25843699_25889566_25889674_25895198_25895230_25933456
ENSMUSG00000022270.17_25933529_25968547_1	chr15	+	325	4	NNC	ENSMUSG00000022270.17	novel	3188	10	NA	NA	-7259	-3876	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAGCAAAGTCAAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	25933528	25968547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_25933583_25964309_25964441_25966718_25966804_25968492
ENSMUSG00000022270.17_25941132_25972440_1	chr15	+	1329	5	NNC	ENSMUSG00000022270.17	novel	1526	8	NA	NA	71	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAAAACACCAACCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	25941131	25972440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_25941330_25968492_25968631_25969881_25969947_25970184_25970311_25971638
ENSMUSG00000022270.17_25941132_25972440_2	chr15	+	1329	5	NNC	ENSMUSG00000022270.17	novel	1526	8	NA	NA	71	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAAAACACCAACCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	25941131	25972440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_25941330_25968493_25968631_25969881_25969947_25970183_25970311_25971638
ENSMUSG00000022270.17_25941132_25972440_3	chr15	+	1327	5	NNC	ENSMUSG00000022270.17	novel	1526	8	NA	NA	71	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAAAACACCAACCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	25941131	25972440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_25941330_25968492_25968631_25969884_25969947_25970183_25970311_25971638
ENSMUSG00000022270.17_25941132_25972440_4	chr15	+	1330	5	FSM	ENSMUSG00000022270.17	ENST00000684456.1	1504	5	71	103	71	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAAAACACCAACCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	25941131	25972440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_25941330_25968492_25968631_25969881_25969947_25970183_25970311_25971638
ENSMUSG00000022270.17_25941205_25972543_1	chr15	+	1359	5	NNC	ENSMUSG00000022270.17	novel	1504	5	NA	NA	144	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	993	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAGCTGTGAGCACATG	NA	NA	NA	NA	NA	NA	NA	NA	25941204	25972543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_25941330_25968493_25968631_25969881_25969947_25970183_25970311_25971638
ENSMUSG00000022270.17_25941205_25972543_2	chr15	+	1357	5	NNC	ENSMUSG00000022270.17	novel	1504	5	NA	NA	144	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1002	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAGCTGTGAGCACATG	NA	NA	NA	NA	NA	NA	NA	NA	25941204	25972543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_25941330_25968492_25968631_25969884_25969947_25970183_25970311_25971638
ENSMUSG00000022270.17_25941205_25972543_3	chr15	+	1359	5	NNC	ENSMUSG00000022270.17	novel	1504	5	NA	NA	144	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAGCTGTGAGCACATG	NA	NA	NA	NA	NA	NA	NA	NA	25941204	25972543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_25941330_25968492_25968631_25969881_25969947_25970184_25970311_25971638
ENSMUSG00000022270.17_25941205_25972543_4	chr15	+	1360	5	FSM	ENSMUSG00000022270.17	ENST00000684456.1	1504	5	144	0	144	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAGCTGTGAGCACATG	NA	NA	NA	NA	NA	NA	NA	NA	25941204	25972543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_25941330_25968492_25968631_25969881_25969947_25970183_25970311_25971638
ENSMUSG00000022280.10_36241471_36245659_1	chr15	-	983	3	ISM	ENSMUSG00000022280.10	ENSMUST00000022890.10	4277	10	37634	1392	37585	-974	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTGGTTGAACCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	36245659	36241470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36242212_36244232_36244377_36245561
ENSMUSG00000022280.10_36253178_36265924_1	chr15	-	989	4	ISM	ENSMUSG00000022280.10	ENSMUST00000228358.2	3452	8	17320	12681	17320	-12681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCATTCCTGTGTACG	NA	NA	NA	NA	NA	NA	NA	NA	36265924	36253177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36253310_36254528_36254674_36260160_36260370_36265421
ENSMUSG00000022283.16_36595905_36597338_1	chr15	-	663	3	ISM	ENSMUSG00000022283.16	ENST00000677765.1	2230	15	11091	16	11091	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	36597338	36595904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36596344_36596806_36596900_36597207
ENSMUSG00000022283.16_36595905_36608604_1	chr15	-	2204	15	FSM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	613	0	146	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	36608604	36595904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ENSMUSG00000022283.16_36596151_36598263_1	chr15	-	549	5	ISM	ENSMUSG00000022283.16	ENST00000677765.1	2230	15	10166	262	10166	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAACAACAAAAAAATACA	NA	NA	NA	NA	NA	NA	NA	NA	36598263	36596150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216
ENSMUSG00000022283.16_36596151_36598371_1	chr15	-	657	5	ISM	ENSMUSG00000022283.16	ENST00000677765.1	2230	15	10058	262	10058	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAACAACAAAAAAATACA	NA	NA	NA	NA	NA	NA	NA	NA	36598371	36596150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216
ENSMUSG00000022283.16_36596151_36608870_1	chr15	-	2224	15	FSM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	347	246	-57	-145	multi-exon	FALSE	canonical	NA	NA	NA	NA	7284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAACAACAAAAAAATACA	NA	NA	NA	NA	NA	NA	NA	NA	36608870	36596150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ENSMUSG00000022283.16_36596151_36609015_1	chr15	-	2369	15	FSM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	202	246	202	-145	multi-exon	FALSE	canonical	NA	NA	NA	NA	8196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAACAACAAAAAAATACA	NA	NA	NA	NA	NA	NA	NA	NA	36609015	36596150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ENSMUSG00000022283.16_36596268_36598556_1	chr15	-	651	6	ISM	ENSMUSG00000022283.16	ENST00000677765.1	2230	15	9873	379	9873	-262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGAAAAAAAACATTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	36598556	36596267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445
ENSMUSG00000022283.16_36596268_36609795_1	chr15	-	2268	16	FSM	ENSMUSG00000022283.16	ENST00000522720.2	2695	16	48	379	39	-262	multi-exon	FALSE	canonical	NA	NA	NA	NA	6790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGAAAAAAAACATTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	36609795	36596267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557_36609015_36609778
ENSMUSG00000022283.16_36596807_36599286_1	chr15	-	666	6	ISM	ENSMUSG00000022283.16	ENST00000610907.2	1767	14	9464	0	9143	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTCTCCCTCGCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	36599286	36596806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195
ENSMUSG00000022283.16_36596807_36609912_1	chr15	-	2309	15	ISM	ENSMUSG00000022283.16	ENST00000522720.2	2695	16	-69	918	-69	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTCTCCCTCGCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	36609912	36596806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557_36609015_36609778
ENSMUSG00000022283.16_36597209_36599487_1	chr15	-	611	6	ISM	ENSMUSG00000022283.16	ENST00000610907.2	1767	14	9263	402	8942	-402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTTTGTGCTTTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	36599487	36597208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448
ENSMUSG00000022283.16_36597268_36599529_1	chr15	-	594	6	ISM	ENSMUSG00000022283.16	ENST00000610907.2	1767	14	9221	461	8900	-461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATTGATAACTCAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	36599529	36597267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448
ENSMUSG00000022283.16_36597288_36599610_1	chr15	-	655	6	ISM	ENSMUSG00000022283.16	ENST00000610907.2	1767	14	9140	481	8819	-481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCACTGGCATGCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	36599610	36597287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448
ENSMUSG00000022283.16_36598545_36601251_1	chr15	-	610	5	ISM	ENSMUSG00000022283.16	ENST00000610907.2	1767	14	7499	1738	7178	-1738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGTGCTATCCGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	36601251	36598544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113
ENSMUSG00000022283.16_36599197_36601653_1	chr15	-	692	5	ISM	ENSMUSG00000022283.16	ENST00000610907.2	1767	14	7097	2390	6776	-2390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGCCTCATTTAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	36601653	36599196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558
ENSMUSG00000022283.16_36599197_36609217_1	chr15	-	1802	9	ISM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	0	3292	0	-2390	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGCCTCATTTAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	36609217	36599196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ENSMUSG00000022283.16_36599599_36605710_1	chr15	-	617	6	ISM	ENSMUSG00000022283.16	ENST00000610907.2	1767	14	3040	2792	2719	-2792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAGCTCAGCGCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	36605710	36599598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685
ENSMUSG00000022283.16_36599644_36605766_1	chr15	-	628	6	ISM	ENSMUSG00000022283.16	ENST00000610907.2	1767	14	2984	2837	2663	-2837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGATGAATGGTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	36605766	36599643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685
ENSMUSG00000022283.16_36600833_36608604_1	chr15	-	686	7	ISM	ENSMUSG00000022283.16	ENST00000610907.2	1767	14	146	4026	146	-4026	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCACTATACTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	36608604	36600832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36606131_36606182_36608557
ENSMUSG00000022283.16_36600886_36606048_1	chr15	-	597	6	ISM	ENSMUSG00000022283.16	ENST00000677765.1	2230	15	2381	4997	2381	-4079	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTCTCCGGAAGGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	36606048	36600885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987
ENSMUSG00000022283.16_36605722_36608891_1	chr15	-	608	3	ISM	ENSMUSG00000022283.16	ENST00000519100.6	2201	14	-78	9716	-78	-8915	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGAATGGGATGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	36608891	36605721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36605802_36605987_36606182_36608557
ENSMUSG00000022285.18_36771813_36775772_1	chr15	-	1418	3	ISM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	18309	-135	18309	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAAAAAAACCGCT	NA	NA	NA	NA	NA	NA	NA	NA	36775772	36771812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36773022_36775482_36775579_36775659
ENSMUSG00000022285.18_36771948_36776613_1	chr15	-	1458	4	ISM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	17468	0	17468	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCAACTACTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	36776613	36771947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489
ENSMUSG00000022285.18_36772256_36791232_1	chr15	-	1455	5	ISM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	2849	308	2849	-308	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCCGGCTCCATACGTA	NA	NA	NA	NA	NA	NA	NA	NA	36791232	36772255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927
ENSMUSG00000022285.18_36772517_36793812_1	chr15	-	1284	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	269	569	269	-569	multi-exon	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAACACCCTGTGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	36793812	36772516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
ENSMUSG00000022285.18_36772517_36793919_1	chr15	-	1391	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	162	569	162	-569	multi-exon	FALSE	canonical	NA	NA	NA	NA	1892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAACACCCTGTGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	36793919	36772516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
ENSMUSG00000022285.18_36772740_36794581_1	chr15	-	1361	7	FSM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	201	1726	194	-792	multi-exon	FALSE	canonical	NA	NA	NA	NA	1538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGATGTGGAATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	36794581	36772739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722_36793920_36794388
ENSMUSG00000022285.18_36772794_36794630_1	chr15	-	1356	7	FSM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	152	1780	145	-846	multi-exon	FALSE	canonical	NA	NA	NA	NA	1660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAGAGCCAGTTAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	36794630	36772793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722_36793920_36794388
ENSMUSG00000022285.18_36772851_36794775_1	chr15	-	1444	7	FSM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	7	1837	0	-903	multi-exon	FALSE	canonical	NA	NA	NA	NA	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTCTATTTGAATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	36794775	36772850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722_36793920_36794388
ENSMUSG00000022285.18_36772868_36794775_1	chr15	-	1427	7	FSM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	7	1854	0	-920	multi-exon	FALSE	canonical	NA	NA	NA	NA	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGACAGGTTTATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	36794775	36772867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722_36793920_36794388
ENSMUSG00000022285.18_36790956_36794081_1	chr15	-	636	2	ISM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	0	19008	0	-19008	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTGACATCTGCAACG	NA	NA	NA	NA	NA	NA	NA	NA	36794081	36790955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36791233_36793722
ENSMUSG00000022286.17_37233619_37361247_1	chr15	+	2093	16	NNC	ENSMUSG00000022286.17	novel	2101	16	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGACTTCCTTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	37233618	37361247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_37233711_37270842_37271030_37274886_37274955_37279577_37279972_37287485_37287542_37288431_37288589_37291804_37291917_37309908_37310004_37328473_37328633_37335945_37336034_37336449_37336590_37338016_37338049_37344896_37344992_37348012_37348099_37358613_37358679_37360980
ENSMUSG00000022286.17_37233619_37361247_2	chr15	+	2096	16	NNC	ENSMUSG00000022286.17	novel	2101	16	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGACTTCCTTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	37233618	37361247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_37233711_37270833_37271030_37274886_37274955_37279577_37279972_37287485_37287542_37288431_37288589_37291804_37291917_37309908_37310004_37328473_37328633_37335945_37336034_37336449_37336590_37338016_37338049_37344902_37344992_37348012_37348099_37358613_37358679_37360980
ENSMUSG00000022286.17_37233619_37361247_3	chr15	+	2101	16	NNC	ENSMUSG00000022286.17	novel	2101	16	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	869	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGACTTCCTTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	37233618	37361247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_37233711_37270833_37271030_37274886_37274955_37279577_37279972_37287485_37287542_37288431_37288589_37291804_37291917_37309908_37310004_37328473_37328633_37335945_37336034_37336449_37336590_37338016_37338049_37344896_37344992_37348012_37348099_37358613_37358679_37360981
ENSMUSG00000022286.17_37233619_37361247_5	chr15	+	2102	16	FSM	ENSMUSG00000022286.17	ENST00000395927.1	2101	16	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGACTTCCTTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	37233618	37361247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_37233711_37270833_37271030_37274886_37274955_37279577_37279972_37287485_37287542_37288431_37288589_37291804_37291917_37309908_37310004_37328473_37328633_37335945_37336034_37336449_37336590_37338016_37338049_37344896_37344992_37348012_37348099_37358613_37358679_37360980
ENSMUSG00000022292.17_37927489_37961135_1	chr15	-	201	2	FSM	ENSMUSG00000022292.17	ENST00000519962.5	201	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCTCCTCATTTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37961135	37927488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_37927642_37961087
ENSMUSG00000022292.17_37927489_37961135_2	chr15	-	196	2	NNC	ENSMUSG00000022292.17	novel	201	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCTCCTCATTTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37961135	37927488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_37927642_37961092
ENSMUSG00000022295.9_38662188_38692690_1	chr15	+	2054	13	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTAGTCATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	38662187	38692690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681316_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ENSMUSG00000022295.9_38662188_38692690_2	chr15	+	2052	13	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTAGTCATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	38662187	38692690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687267_38687354_38689368_38689467_38690776_38690904_38691855
ENSMUSG00000022295.9_38662188_38692690_3	chr15	+	2051	13	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTAGTCATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	38662187	38692690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683245_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ENSMUSG00000022295.9_38662188_38692690_4	chr15	+	2052	13	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTAGTCATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	38662187	38692690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_38662328_38673100_38673265_38674140_38674201_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ENSMUSG00000022295.9_38662188_38692690_5	chr15	+	2052	13	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTAGTCATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	38662187	38692690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689459_38690776_38690904_38691855
ENSMUSG00000022295.9_38662188_38692690_6	chr15	+	2052	13	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTAGTCATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	38662187	38692690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681402_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ENSMUSG00000022295.9_38662188_38692690_7	chr15	+	2055	13	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTAGTCATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	38662187	38692690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679568_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ENSMUSG00000022297.16_38869429_38901587_1	chr15	+	4323	7	NNC	ENSMUSG00000022297.16	novel	4325	7	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTATTGTGTGCTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	38869428	38901587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_38869828_38870619_38870959_38889060_38889258_38894209_38895228_38897244_38897394_38898202_38898623_38899786
ENSMUSG00000022300.11_38976260_39010251_1	chr15	+	1540	11	NNC	ENSMUSG00000022300.11	novel	1551	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCAGTTGTGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38976259	39010251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_38976447_38982105_38982295_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
ENSMUSG00000022300.11_38976260_39010251_3	chr15	+	1546	11	NNC	ENSMUSG00000022300.11	novel	1551	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCAGTTGTGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38976259	39010251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_38976447_38982105_38982306_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007022_39007154_39008485_39008650_39010067
ENSMUSG00000022300.11_38976260_39010251_4	chr15	+	1545	11	NNC	ENSMUSG00000022300.11	novel	1551	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCAGTTGTGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38976259	39010251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_38976447_38982105_38982306_38982739_38982848_38986607_38986698_38987723_38987874_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
ENSMUSG00000022300.11_38976260_39010251_5	chr15	+	1544	11	NNC	ENSMUSG00000022300.11	novel	1551	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCAGTTGTGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38976259	39010251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_38976447_38982105_38982306_38982739_38982848_38986614_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
ENSMUSG00000022307.17_41516880_41683349_1	chr15	+	936	7	ISM	ENSMUSG00000022307.17	ENST00000442977.6	2768	15	17	39528	17	-7076	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAGGAGCACCGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	41516879	41683349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234
ENSMUSG00000022307.17_41516939_41683396_1	chr15	+	924	7	ISM	ENSMUSG00000022307.17	ENST00000442977.6	2768	15	76	39481	76	-7029	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAACTCTCTCCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	41516938	41683396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234
ENSMUSG00000022307.17_41516988_41683451_1	chr15	+	930	7	ISM	ENSMUSG00000022307.17	ENST00000442977.6	2768	15	125	39426	125	-6974	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATCTGATGCCTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	41516987	41683451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234
ENSMUSG00000022307.17_41663867_41683629_1	chr15	+	955	5	ISM	ENSMUSG00000022307.17	ENSMUST00000230778.2	2818	9	11090	6796	10956	-6796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACAGAAAGCCTTCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	41663866	41683629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234
ENSMUSG00000022307.17_41664975_41683776_1	chr15	+	997	4	ISM	ENSMUSG00000022307.17	ENSMUST00000230778.2	2818	9	12198	6649	12064	-6649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGAAAAACCAGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	41664974	41683776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_41665092_41676969_41677123_41680477_41680663_41683234
ENSMUSG00000022307.17_41680546_41686803_1	chr15	+	938	3	ISM	ENSMUSG00000022307.17	ENSMUST00000230778.2	2818	9	27769	3622	-13782	-3622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGTATCGCAAGCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	41680545	41686803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_41680663_41683234_41683975_41686722
ENSMUSG00000022307.17_41683235_41686892_1	chr15	+	914	2	ISM	ENSMUSG00000022307.17	ENST00000442977.6	2768	15	166372	35985	-11093	-3533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAAGCTTCAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	41683234	41686892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_41683979_41686722
ENSMUSG00000022307.17_41683272_41689411_1	chr15	+	998	3	ISM	ENSMUSG00000022307.17	ENSMUST00000230778.2	2818	9	30495	1014	-11056	-1014	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTGCTGGTGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	41683271	41689411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_41683975_41686722_41686892_41689285
ENSMUSG00000022307.17_41683482_41713905_1	chr15	+	957	5	ISM	ENSMUSG00000022307.17	ENSMUST00000022918.15	4239	15	30571	10538	-10846	-8799	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGAGCCTGAATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	41683481	41713905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_41683975_41686722_41686892_41689285_41689449_41712065_41712147_41713854
ENSMUSG00000022307.17_41683643_41714831_1	chr15	+	932	6	ISM	ENSMUSG00000022307.17	ENSMUST00000022918.15	4239	15	30732	9612	-10685	-7873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCATGGTACAAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	41683642	41714831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_41683975_41686722_41686892_41689285_41689449_41712065_41712147_41713854_41713981_41714770
ENSMUSG00000022307.17_41683699_41714894_1	chr15	+	939	6	ISM	ENSMUSG00000022307.17	ENSMUST00000022918.15	4239	15	30788	9549	-10629	-7810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGGTGATTAAAGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	41683698	41714894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_41683975_41686722_41686892_41689285_41689449_41712065_41712147_41713854_41713981_41714770
ENSMUSG00000022307.17_41683752_41714923_1	chr15	+	915	6	ISM	ENSMUSG00000022307.17	ENSMUST00000022918.15	4239	15	30841	9520	-10576	-7781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGAAAATCTAATCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	41683751	41714923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_41683975_41686722_41686892_41689285_41689449_41712065_41712147_41713854_41713981_41714770
ENSMUSG00000022307.17_41686723_41722704_1	chr15	+	1013	8	ISM	ENSMUSG00000022307.17	ENSMUST00000022918.15	4239	15	33812	1739	-7605	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGCAGGACATCGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	41686722	41722704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_41686892_41689285_41689449_41712065_41712147_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ENSMUSG00000022307.17_41689284_41722877_1	chr15	+	1019	7	ISM	ENSMUSG00000022307.17	ENSMUST00000022918.15	4239	15	36373	1566	-5044	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACACCATGGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	41689283	41722877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_41689449_41712065_41712147_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ENSMUSG00000022309.10_42288119_42331629_1	chr15	-	2784	4	ISM	ENSMUSG00000022309.10	ENSMUST00000022921.7	4260	9	208744	0	208744	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTCATAAGATTACATT	NA	NA	NA	NA	NA	NA	NA	NA	42331629	42288118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_42290527_42301670_42301802_42323062_42323230_42331551
ENSMUSG00000022309.10_42288276_42339806_1	chr15	-	2684	5	ISM	ENSMUSG00000022309.10	ENSMUST00000022921.7	4260	9	200567	157	200567	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTATAATGTGTACATTG	NA	NA	NA	NA	NA	NA	NA	NA	42339806	42288275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_42290527_42301670_42301802_42323062_42323230_42331551_42331654_42339773
ENSMUSG00000022309.10_42288393_42359671_1	chr15	-	2711	6	ISM	ENSMUSG00000022309.10	ENSMUST00000022921.7	4260	9	180702	274	180702	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAATCCACATTACAA	NA	NA	NA	NA	NA	NA	NA	NA	42359671	42288392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_42290527_42301670_42301802_42323062_42323230_42331551_42331654_42339773_42339902_42359622
ENSMUSG00000022309.10_42288725_42386921_1	chr15	-	2707	8	ISM	ENSMUSG00000022309.10	ENSMUST00000022921.7	4260	9	153452	606	153452	-606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACAAAGCCTTAGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	42386921	42288724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_42290527_42301670_42301802_42323062_42323230_42331551_42331654_42339773_42339902_42359622_42359856_42375679_42375802_42386899
ENSMUSG00000022309.10_42288875_42387028_1	chr15	-	2664	8	ISM	ENSMUSG00000022309.10	ENSMUST00000022921.7	4260	9	153345	756	153345	-756	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAAGGTTATAGTAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	42387028	42288874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_42290527_42301670_42301802_42323062_42323230_42331551_42331654_42339773_42339902_42359622_42359856_42375679_42375802_42386899
ENSMUSG00000022309.10_42289052_42539750_1	chr15	-	2704	9	FSM	ENSMUSG00000022309.10	ENSMUST00000022921.7	4260	9	623	933	623	-933	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTATAGAAAAAATTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	42539750	42289051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_42290527_42301670_42301802_42323062_42323230_42331551_42331654_42339773_42339902_42359622_42359856_42375679_42375802_42386899_42387056_42539560
ENSMUSG00000022309.10_42289266_42539947_1	chr15	-	2687	9	FSM	ENSMUSG00000022309.10	ENSMUST00000022921.7	4260	9	426	1147	426	-1147	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGCTAAACTCAATAATT	NA	NA	NA	NA	NA	NA	NA	NA	42539947	42289265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_42290527_42301670_42301802_42323062_42323230_42331551_42331654_42339773_42339902_42359622_42359856_42375679_42375802_42386899_42387056_42539560
ENSMUSG00000022312.12_51649954_51728850_1	chr15	-	1221	8	NNC	ENSMUSG00000022312.12	novel	1295	8	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTGTATTTATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	51728850	51649953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662751_51705863_51706021_51728721
ENSMUSG00000022312.12_51649954_51728850_2	chr15	-	1221	8	NNC	ENSMUSG00000022312.12	novel	1295	8	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTGTATTTATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	51728850	51649953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_51650217_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
ENSMUSG00000022312.12_51649954_51728850_3	chr15	-	1226	8	FSM	ENSMUSG00000022312.12	ENSMUST00000022925.10	1295	8	69	0	69	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTGTATTTATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	51728850	51649953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
ENSMUSG00000022312.12_51649954_51728863_1	chr15	-	1233	8	NNC	ENSMUSG00000022312.12	novel	1295	8	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTGTATTTATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	51728863	51649953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_51650222_51651301_51651429_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
ENSMUSG00000022312.12_51649954_51728919_1	chr15	-	1290	8	NNC	ENSMUSG00000022312.12	novel	1295	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTGTATTTATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	51728919	51649953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_51650217_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
ENSMUSG00000022312.12_51649954_51728919_2	chr15	-	1290	8	NNC	ENSMUSG00000022312.12	novel	1295	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5025	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTGTATTTATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	51728919	51649953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662751_51705863_51706021_51728721
ENSMUSG00000022313.11_51740901_51747042_1	chr15	+	1877	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	76	968	0	957	multi-exon	FALSE	canonical	NA	NA	NA	NA	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCTTGATAACTGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	51740900	51747042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_51741107_51744411_51744587_51745546
ENSMUSG00000022313.11_51740901_51747103_1	chr15	+	1938	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	76	907	0	-907	multi-exon	FALSE	canonical	NA	NA	NA	NA	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTACCTCCACACCTC	NA	NA	NA	NA	NA	NA	NA	NA	51740900	51747103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_51741107_51744411_51744587_51745546
ENSMUSG00000022313.11_51741040_51747185_1	chr15	+	1881	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	215	825	-98	-825	multi-exon	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCATTATTTTGTATATG	NA	NA	NA	NA	NA	NA	NA	NA	51741039	51747185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_51741107_51744411_51744587_51745546
ENSMUSG00000022313.11_51744441_51747289_1	chr15	+	1889	2	ISM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	3616	721	31	-721	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTACCGTCTGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	51744440	51747289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_51744587_51745546
ENSMUSG00000022313.11_51744507_51747345_1	chr15	+	1879	2	ISM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	3682	665	97	-665	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAATAAACAAGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51744506	51747345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_51744587_51745546
ENSMUSG00000022314.11_51826719_51830058_1	chr15	-	1090	3	ISM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	25085	1083	25085	-1083	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTGCCTGCTGAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	51830058	51826718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_51827644_51828350_51828435_51829977
ENSMUSG00000022314.11_51826987_51831792_1	chr15	-	1086	5	ISM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	23351	1351	23351	-1351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGATAGTGTGTGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	51831792	51826986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746
ENSMUSG00000022314.11_51827046_51831857_1	chr15	-	1092	5	ISM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	23286	1410	23286	-1410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGGAAGAGAAAAATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	51831857	51827045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746
ENSMUSG00000022314.11_51827203_51833419_1	chr15	-	1099	6	ISM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	21724	1567	21724	-1567	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAGAACAGATGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	51833419	51827202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316
ENSMUSG00000022314.11_51827345_51835189_1	chr15	-	1126	7	ISM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	19954	1709	19954	-1709	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTTTGCCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	51835189	51827344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141
ENSMUSG00000022314.11_51827549_51835677_1	chr15	-	1077	8	ISM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	19466	1913	19466	-1913	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTCTTAAGAAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	51835677	51827548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597
ENSMUSG00000022314.11_51829996_51836638_1	chr15	-	1083	7	ISM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	18505	4360	18505	-4360	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGGAGGAGGAGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	51836638	51829995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481
ENSMUSG00000022314.11_51831823_51841560_1	chr15	-	1103	8	ISM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	13583	6187	13583	-6187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGAATCCAGAGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	51841560	51831822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440
ENSMUSG00000022322.9_4785976_4791966_1	chr8	-	780	4	ISM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	37588	0	37588	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTGAAATGTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	4791966	4785975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847
ENSMUSG00000022322.9_4786230_4799311_1	chr8	-	799	7	ISM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	30243	254	30243	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAGAAAAGACTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	4799311	4786229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291
ENSMUSG00000022322.9_4786392_4799421_1	chr8	-	747	7	ISM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	30133	416	30133	-416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAGAGGCAGATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	4799421	4786391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291
ENSMUSG00000022322.9_4789207_4799675_1	chr8	-	812	7	ISM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	29879	3231	29879	-3231	internal_fragment	TRUE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGAAGGTTATGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	4799675	4789206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551
ENSMUSG00000022322.9_4791919_4804273_1	chr8	-	758	6	ISM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	25281	5943	25281	-5943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCACAGGAGTCACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	4804273	4791918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219
ENSMUSG00000022322.9_4794447_4814900_1	chr8	-	769	6	ISM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	14654	8471	14654	-8471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTATCTGGATGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	4814900	4794446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880
ENSMUSG00000022322.9_4794473_4814981_1	chr8	-	824	6	ISM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	14573	8497	14573	-8497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGATTCTGTGGAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	4814981	4794472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880
ENSMUSG00000022322.9_4794552_4815016_1	chr8	-	780	6	ISM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	14538	8576	14538	-8576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAAGAGGGGCAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	4815016	4794551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880
ENSMUSG00000022322.9_4799292_4818030_1	chr8	-	829	5	ISM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	11524	13316	11524	-13316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAGAAGTTATTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	4818030	4799291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906
ENSMUSG00000022322.9_4799422_4818215_1	chr8	-	763	6	ISM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	11339	13446	11339	-13446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGTACTCGTCAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	4818215	4799421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143
ENSMUSG00000022322.9_4799752_4829476_1	chr8	-	676	6	ISM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	78	13776	78	-13776	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTATTGTTGACTACCA	NA	NA	NA	NA	NA	NA	NA	NA	4829476	4799751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
ENSMUSG00000022323.12_34484650_34487905_1	chr15	-	175	4	ISM	ENSMUSG00000022323.12	ENSMUST00000022946.6	1004	6	7496	483	7496	-483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGGCCTTTCATCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	34487905	34484649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_34484682_34485745_34485802_34486756_34486826_34487887
ENSMUSG00000022324.16_34306823_34345162_1	chr15	+	413	3	ISM	ENSMUSG00000022324.16	ENST00000521689.5	3132	18	125	88569	-3	-2832	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGGTGTTCATCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	34306822	34345162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34307045_34316636_34316802_34345136
ENSMUSG00000022324.16_34306831_34345226_1	chr15	+	469	3	ISM	ENSMUSG00000022324.16	ENST00000521689.5	3132	18	133	88505	0	-2768	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTCTGGATATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	34306830	34345226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34307045_34316636_34316802_34345136
ENSMUSG00000022324.16_34306831_34426379_1	chr15	+	2137	13	ISM	ENSMUSG00000022324.16	ENSMUST00000228570.2	2798	14	0	2809	0	-2809	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGTGCTCAGAGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	34306830	34426379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34307055_34316636_34316802_34345136_34345707_34355708_34355832_34378800_34378924_34388869_34388993_34399195_34399319_34402980_34403104_34409898_34410022_34410259_34410383_34422487_34422611_34423839_34423963_34426308
ENSMUSG00000022324.16_34306939_34345296_1	chr15	+	431	3	ISM	ENSMUSG00000022324.16	ENST00000521689.5	3132	18	241	88435	108	-2698	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGCACGGTCAAGAACG	NA	NA	NA	NA	NA	NA	NA	NA	34306938	34345296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34307045_34316636_34316802_34345136
ENSMUSG00000022324.16_34316635_34428723_1	chr15	+	2111	13	ISM	ENSMUSG00000022324.16	ENSMUST00000228570.2	2798	14	9804	465	9804	-465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCAGTATTCCACACAG	NA	NA	NA	NA	NA	NA	NA	NA	34316634	34428723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34316802_34345136_34345707_34355708_34355832_34378800_34378924_34388869_34388993_34399195_34399319_34402980_34403104_34409898_34410022_34410259_34410383_34422487_34422611_34423839_34423963_34426308_34426432_34428579
ENSMUSG00000022324.16_34345341_34431693_1	chr15	+	2086	13	ISM	ENSMUSG00000022324.16	ENSMUST00000227759.2	3569	19	38510	4691	205	-2038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCATCTCTTCTACGCTG	NA	NA	NA	NA	NA	NA	NA	NA	34345340	34431693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34345707_34355708_34355832_34378800_34378924_34388869_34388993_34399195_34399319_34402980_34403104_34409898_34410022_34410259_34410383_34422487_34422611_34423839_34423963_34426308_34426432_34428579_34428994_34431617
ENSMUSG00000022324.16_34345572_34433298_1	chr15	+	2067	15	ISM	ENSMUSG00000022324.16	ENSMUST00000022947.7	3551	19	38745	3121	436	-433	internal_fragment	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCAAATCTTCAGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	34345571	34433298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34345707_34355708_34355832_34378800_34378924_34388869_34388993_34399195_34399319_34402980_34403104_34409898_34410022_34410259_34410383_34422487_34422611_34423839_34423963_34426308_34426432_34428579_34428994_34431617_34431771_34432825_34432898_34433235
ENSMUSG00000022324.16_34355704_34410382_1	chr15	+	743	6	NIC	ENSMUSG00000022324.16	novel	2798	14	NA	NA	-26	-18806	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTTCATTACACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	34355703	34410382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_+_34355832_34378800_34378924_34388869_34388993_34402980_34403104_34409898_34410022_34410259
ENSMUSG00000022324.16_34378801_34422610_1	chr15	+	861	7	ISM	ENSMUSG00000022324.16	ENSMUST00000228570.2	2798	14	71970	6578	23071	-6578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTTACTAGAGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	34378800	34422610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34378924_34388869_34388993_34399195_34399319_34402980_34403104_34409898_34410022_34410259_34410383_34422487
ENSMUSG00000022324.16_34378836_34436046_1	chr15	+	2057	15	ISM	ENSMUSG00000022324.16	ENSMUST00000022947.7	3551	19	72009	373	23106	-332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACAGGAGACACTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	34378835	34436046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34378924_34388869_34388993_34399195_34399319_34402980_34403104_34409898_34410022_34410259_34410383_34422487_34422611_34423839_34423963_34426308_34426432_34428579_34428994_34431617_34431771_34432825_34432898_34433235_34433314_34433632_34433732_34435877
ENSMUSG00000022324.16_34388868_34423967_1	chr15	+	868	7	ISM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	33138	12418	33138	-5221	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCAAGGTCTGCATATG	NA	NA	NA	NA	NA	NA	NA	NA	34388867	34423967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34388993_34399195_34399319_34402980_34403104_34409898_34410022_34410259_34410383_34422487_34422611_34423839
ENSMUSG00000022324.16_34399196_34426431_1	chr15	+	861	7	ISM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	43466	9954	43466	-2757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGACCAAAACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	34399195	34426431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34399319_34402980_34403104_34409898_34410022_34410259_34410383_34422487_34422611_34423839_34423963_34426308
ENSMUSG00000022324.16_34399240_34436384_1	chr15	+	2140	13	ISM	ENSMUSG00000022324.16	ENSMUST00000022947.7	3551	19	92413	35	43510	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAGTGTTGAGTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	34399239	34436384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34399319_34402980_34403104_34409898_34410022_34410259_34410383_34422487_34422611_34423839_34423963_34426308_34426432_34428579_34428994_34431617_34431771_34432825_34432898_34433235_34433314_34433632_34433732_34435877
ENSMUSG00000022324.16_34409899_34428776_1	chr15	+	812	6	ISM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	54169	7609	54169	-412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGCCAAGGAAATGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	34409898	34428776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34410022_34410259_34410383_34422487_34422611_34423839_34423963_34426308_34426432_34428579
ENSMUSG00000022324.16_34426309_34433313_1	chr15	+	897	5	ISM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	70579	3072	70579	-418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTCCAAGTGAACAATC	NA	NA	NA	NA	NA	NA	NA	NA	34426308	34433313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34426432_34428579_34428994_34431617_34431771_34432825_34432898_34433178
ENSMUSG00000022324.16_34428580_34433729_1	chr15	+	871	5	ISM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	72850	2656	72850	-2	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATCCTTTTCCAGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	34428579	34433729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34428994_34431617_34431771_34432825_34432898_34433178_34433314_34433632
ENSMUSG00000022324.16_34428766_34435967_1	chr15	+	777	6	ISM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	73036	418	73036	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTAAAAAGGATTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	34428765	34435967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34428994_34431617_34431771_34432825_34432898_34433178_34433314_34433632_34433732_34435877
ENSMUSG00000022324.16_34428810_34436045_1	chr15	+	811	6	ISM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	73080	340	73080	-333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTACAGGAGACACTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	34428809	34436045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34428994_34431617_34431771_34432825_34432898_34433178_34433314_34433632_34433732_34435877
ENSMUSG00000022324.16_34428861_34436082_1	chr15	+	797	6	ISM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	73131	303	73131	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAATGGAGACACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	34428860	34436082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34428994_34431617_34431771_34432825_34432898_34433178_34433314_34433632_34433732_34435877
ENSMUSG00000022324.16_34428906_34436142_1	chr15	+	812	6	ISM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	73176	243	73176	-236	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAGTTTACCATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	34428905	34436142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34428994_34431617_34431771_34432825_34432898_34433178_34433314_34433632_34433732_34435877
ENSMUSG00000022324.16_34431704_34436384_1	chr15	+	880	5	ISM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	75974	1	75974	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAGTGTTGAGTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	34431703	34436384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_34431771_34432825_34432898_34433178_34433314_34433632_34433732_34435877
ENSMUSG00000022329.16_34875642_34959222_1	chr15	-	1712	3	ISM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	196730	0	196674	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTTGTTGTTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	34959222	34875641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_34876967_34945151_34945328_34959011
ENSMUSG00000022329.16_34876499_35115791_1	chr15	-	1777	10	ISM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	40161	857	40105	-680	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCACTGGAGGGCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	35115791	34876498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710
ENSMUSG00000022329.16_34876629_35155815_1	chr15	-	1790	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	137	987	81	-810	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAAGGATGAGAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	35155815	34876628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
ENSMUSG00000022329.16_34876761_35155896_1	chr15	-	1739	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	56	1119	0	-942	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGGAATTCTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	35155896	34876760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
ENSMUSG00000022336.4_43113454_43115010_1	chr15	-	315	2	ISM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	31105	0	31084	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTTGCTTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	43115010	43113453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_43113634_43114875
ENSMUSG00000022336.4_43113570_43115709_1	chr15	-	308	3	ISM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	30406	116	30385	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATAAGTGAAAGACACAG	NA	NA	NA	NA	NA	NA	NA	NA	43115709	43113569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_43113634_43114875_43115011_43115600
ENSMUSG00000022336.4_43114875_43146115_1	chr15	-	1231	11	FSM	ENSMUSG00000022336.4	ENST00000677272.1	1210	11	-21	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATCAAACAGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	43146115	43114874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138770_43145998
ENSMUSG00000022336.4_43114875_43171971_1	chr15	-	1350	12	NNC	ENSMUSG00000022336.4	novel	1378	12	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATCAAACAGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	43171971	43114874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134375_43135671_43135715_43138632_43138751_43141703_43141819_43171826
ENSMUSG00000022336.4_43114875_43171971_2	chr15	-	1355	12	FSM	ENSMUSG00000022336.4	ENST00000678023.1	1378	12	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATCAAACAGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	43171971	43114874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43171826
ENSMUSG00000022336.4_43114875_43171971_3	chr15	-	1349	12	NNC	ENSMUSG00000022336.4	novel	1378	12	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6076	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATCAAACAGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	43171971	43114874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43171832
ENSMUSG00000022337.8_43340637_43390846_1	chr15	+	906	11	FSM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	12	313	12	-313	multi-exon	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTGGAGACATTGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	43340636	43390846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ENSMUSG00000022337.8_43340637_43390880_1	chr15	+	940	11	FSM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	12	279	12	-279	multi-exon	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCAGGAACCCATTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	43340636	43390880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ENSMUSG00000022337.8_43340637_43390958_1	chr15	+	1018	11	FSM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	12	201	12	-201	multi-exon	FALSE	canonical	NA	NA	NA	NA	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGCTATTTGTATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	43340636	43390958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ENSMUSG00000022337.8_43355632_43391007_1	chr15	+	916	10	ISM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	15007	152	15007	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAACTAAACCTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	43355631	43391007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ENSMUSG00000022337.8_43358559_43391159_1	chr15	+	956	8	ISM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	17934	0	17934	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGAAAATTCTAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	43358558	43391159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ENSMUSG00000022338.9_44291543_44299106_1	chr15	+	346	5	FSM	ENSMUSG00000022338.9	ENSMUST00000226827.2	558	5	55	157	35	-157	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGATTTATTTCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	44291542	44299106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_44291567_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ENSMUSG00000022338.9_44291543_44301652_1	chr15	+	2959	5	NNC	ENSMUSG00000022338.9	novel	3000	5	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTCTCATTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	44291542	44301652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_44291639_44292960_44293033_44295833_44295905_44297294_44297370_44299007
ENSMUSG00000022338.9_44291543_44301652_2	chr15	+	2958	5	NNC	ENSMUSG00000022338.9	novel	3000	5	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTCTCATTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	44291542	44301652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_44291639_44292955_44293033_44295833_44295899_44297294_44297370_44299007
ENSMUSG00000022339.10_44482700_44504911_1	chr15	+	1816	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	129	0	129	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAACTGATTTTCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	44482699	44504911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ENSMUSG00000022340.16_44535252_44612758_1	chr15	-	2867	8	NIC	ENSMUSG00000022340.16	novel	3127	8	NA	NA	-690	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	5252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTCTCCTATAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	44612758	44535251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_-_44537045_44538761_44538912_44540930_44541135_44546743_44546847_44582183_44582382_44609641_44609859_44611704_44611795_44612646
ENSMUSG00000022340.16_44535425_44615614_1	chr15	-	2822	9	NIC	ENSMUSG00000022340.16	novel	3081	9	NA	NA	20	-170	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	3857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTCCAAAGTCTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	44615614	44535424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_-_44537045_44538761_44538912_44540930_44541135_44546743_44546847_44582183_44582382_44609641_44609859_44611704_44611795_44612646_44612755_44615482
ENSMUSG00000022340.16_44535531_44615688_1	chr15	-	2790	9	NIC	ENSMUSG00000022340.16	novel	3081	9	NA	NA	11	169	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	3288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAAATGTACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	44615688	44535530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_-_44537045_44538761_44538912_44540930_44541135_44546743_44546847_44582183_44582382_44609641_44609859_44611704_44611795_44612646_44612755_44615482
ENSMUSG00000022340.16_44536161_44651062_1	chr15	-	1617	6	FSM	ENSMUSG00000022340.16	ENSMUST00000110269.8	2920	6	397	906	178	-461	multi-exon	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTCCCAGGGCAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	44651062	44536160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_44537045_44538761_44538912_44540930_44541135_44546743_44546847_44582183_44582382_44650984
ENSMUSG00000022340.16_44536213_44651116_1	chr15	-	1619	6	FSM	ENSMUSG00000022340.16	ENSMUST00000110269.8	2920	6	343	958	124	-513	multi-exon	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGCTAGATTTTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	44651116	44536212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_44537045_44538761_44538912_44540930_44541135_44546743_44546847_44582183_44582382_44650984
ENSMUSG00000022340.16_44536290_44651185_1	chr15	-	1611	6	FSM	ENSMUSG00000022340.16	ENSMUST00000110269.8	2920	6	274	1035	55	-590	multi-exon	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGGCCATCCTTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	44651185	44536289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_44537045_44538761_44538912_44540930_44541135_44546743_44546847_44582183_44582382_44650984
ENSMUSG00000022340.16_44536499_44569830_1	chr15	-	1076	5	NIC	ENSMUSG00000022340.16	novel	1967	5	NA	NA	96	-799	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGCATTGCGGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	44569830	44536498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_-_44537045_44538761_44538912_44540930_44541135_44546743_44546847_44569757
ENSMUSG00000022340.16_44536551_44569885_1	chr15	-	1079	5	NIC	ENSMUSG00000022340.16	novel	1967	5	NA	NA	41	-851	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCACTCCAGGGCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	44569885	44536550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_-_44537045_44538761_44538912_44540930_44541135_44546743_44546847_44569757
ENSMUSG00000022340.16_44541022_44651185_1	chr15	-	922	6	ISM	ENSMUSG00000022340.16	ENSMUST00000090057.6	3230	8	274	5770	55	-5322	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTAACATCCACCCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	44651185	44541021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_44541135_44546743_44546847_44582183_44582382_44609641_44609859_44611704_44611795_44650984
ENSMUSG00000022340.16_44609720_44615503_1	chr15	-	250	3	ISM	ENSMUSG00000022340.16	ENST00000408908.6	2973	8	196	74469	131	14651	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGAAAGTAGAGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	44615503	44609719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_44609859_44611704_44611795_44615482
ENSMUSG00000022340.16_44609782_44615553_1	chr15	-	238	3	ISM	ENSMUSG00000022340.16	ENST00000408908.6	2973	8	146	74531	81	14589	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCAGCAGCAGCAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	44615553	44609781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_44609859_44611704_44611795_44615482
ENSMUSG00000022340.16_44609828_44615613_1	chr15	-	252	3	ISM	ENSMUSG00000022340.16	ENST00000408908.6	2973	8	86	74577	21	14543	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTCCAGGAGCCGGATT	NA	NA	NA	NA	NA	NA	NA	NA	44615613	44609827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_44609859_44611704_44611795_44615482
ENSMUSG00000022346.18_61857471_61860127_1	chr15	+	1102	2	ISM	ENSMUSG00000022346.18	ENSMUST00000161976.8	2338	3	231	2072	0	-1630	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCTACCCCATTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	61857470	61860127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_61857801_61859355
ENSMUSG00000022346.18_61857471_61862223_1	chr15	+	2128	3	FSM	ENSMUSG00000022346.18	ENSMUST00000159327.2	2186	3	58	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTCTTTTTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	61857470	61862223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_61857801_61859358_61860128_61861194
ENSMUSG00000022350.8_59203846_59224378_1	chr15	-	2407	19	ISM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	21638	0	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	59224378	59203845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349
ENSMUSG00000022350.8_59203846_59224479_1	chr15	-	2508	19	ISM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	21537	0	-101	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	59224479	59203845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349
ENSMUSG00000022350.8_59203970_59227712_1	chr15	-	2414	20	ISM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	18304	124	-3334	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGTTTTGTACTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	59227712	59203969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682
ENSMUSG00000022350.8_59206937_59233085_1	chr15	-	2471	20	ISM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	12931	3091	-8707	-3091	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGAGGGCCAGTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	59233085	59206936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971
ENSMUSG00000022350.8_59209037_59235195_1	chr15	-	2475	20	ISM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	10821	5191	-10817	-5191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGCCAAATTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	59235195	59209036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042
ENSMUSG00000022350.8_59210820_59238108_1	chr15	-	2413	20	ISM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	7908	6974	7908	-6974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATGAAATCACAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	59238108	59210819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011
ENSMUSG00000022350.8_59213788_59241147_1	chr15	-	2481	19	ISM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	4869	9942	4869	-9942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTGGACCCCACACC	NA	NA	NA	NA	NA	NA	NA	NA	59241147	59213787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001
ENSMUSG00000022350.8_59215874_59241809_1	chr15	-	2399	19	ISM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	4207	12028	4207	-12028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATTTCTGAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	59241809	59215873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728
ENSMUSG00000022350.8_59215921_59241876_1	chr15	-	2419	19	ISM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	4140	12075	4140	-12075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTCGACTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	59241876	59215920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728
ENSMUSG00000022350.8_59217187_59242034_1	chr15	-	2499	18	ISM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	3982	13341	3982	-13341	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGAACAAGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	59242034	59217186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728
ENSMUSG00000022351.15_59187750_59193206_1	chr15	+	526	3	ISM	ENSMUSG00000022351.15	ENSMUST00000100640.5	2636	10	794	9835	794	-9835	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCATGACTATGAAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	59187749	59193206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_59187979_59189644_59189898_59193162
ENSMUSG00000022351.15_59187801_59193271_1	chr15	+	540	3	ISM	ENSMUSG00000022351.15	ENSMUST00000100640.5	2636	10	845	9770	845	-9770	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGTGGAATTGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	59187800	59193271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_59187979_59189644_59189898_59193162
ENSMUSG00000022351.15_59187927_59194714_1	chr15	+	516	4	ISM	ENSMUSG00000022351.15	ENSMUST00000100640.5	2636	10	971	8327	971	-8327	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACTAGAGGAAGATGATG	NA	NA	NA	NA	NA	NA	NA	NA	59187926	59194714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684
ENSMUSG00000022351.15_59189765_59195671_1	chr15	+	541	5	ISM	ENSMUSG00000022351.15	ENSMUST00000100640.5	2636	10	2809	7370	2809	-7370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAATTTTGCGGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	59189764	59195671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655
ENSMUSG00000022351.15_59189835_59195710_1	chr15	+	510	5	ISM	ENSMUSG00000022351.15	ENSMUST00000100640.5	2636	10	2879	7331	2879	-7331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTCTCATCTACCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	59189834	59195710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655
ENSMUSG00000022351.15_59193194_59196338_1	chr15	+	561	5	ISM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	6264	6703	6238	-6703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGAATGGTCGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	59193193	59196338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310
ENSMUSG00000022351.15_59193269_59196364_1	chr15	+	512	5	ISM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	6339	6677	6313	-6677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGGCCAGCTTCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	59193268	59196364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310
ENSMUSG00000022351.15_59194685_59197922_1	chr15	+	518	5	ISM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	7755	5119	7729	-5119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTACTGGTGGAGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	59194684	59197922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883
ENSMUSG00000022351.15_59195768_59202602_1	chr15	+	513	6	ISM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	8838	439	8812	-439	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTTCTTTTCCGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	59195767	59202602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
ENSMUSG00000022351.15_59196386_59202756_1	chr15	+	532	5	ISM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	9456	285	9430	-285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCATTGAAAGGGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	59196385	59202756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
ENSMUSG00000022351.15_59197986_59202879_1	chr15	+	532	4	ISM	ENSMUSG00000022351.15	ENSMUST00000100640.5	2636	10	11030	162	11030	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAGCCTTACTTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	59197985	59202879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_59198027_59198418_59198516_59201588_59201677_59202573
ENSMUSG00000022351.15_59201588_59203042_1	chr15	+	558	2	ISM	ENSMUSG00000022351.15	ENSMUST00000100640.5	2636	10	14632	-1	14632	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTTGGTTTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	59201587	59203042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_59201677_59202573
ENSMUSG00000022353.11_58815209_58817374_1	chr15	-	935	2	ISM	ENSMUSG00000022353.11	ENST00000431961.6	1677	7	11067	43	11067	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCATTCCAGTCTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	58817374	58815208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_58815980_58817210
ENSMUSG00000022353.11_58815402_58823370_1	chr15	-	916	4	ISM	ENSMUSG00000022353.11	ENST00000431961.6	1677	7	5071	236	5071	-236	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCGCAGACCTGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	58823370	58815401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_58815980_58817210_58817374_58817694_58817818_58823318
ENSMUSG00000022353.11_58815461_58823413_1	chr15	-	900	4	ISM	ENSMUSG00000022353.11	ENST00000431961.6	1677	7	5028	295	5028	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCAGGAAAGGGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	58823413	58815460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_58815980_58817210_58817374_58817694_58817818_58823318
ENSMUSG00000022353.11_58815519_58823467_1	chr15	-	896	4	ISM	ENSMUSG00000022353.11	ENST00000431961.6	1677	7	4974	353	4974	-353	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCAAAGCCCAGTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	58823467	58815518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_58815980_58817210_58817374_58817694_58817818_58823318
ENSMUSG00000022353.11_58815754_58828321_1	chr15	-	969	7	FSM	ENSMUSG00000022353.11	ENST00000431961.6	1677	7	120	588	120	-588	multi-exon	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGCCGGGGGACCATCG	NA	NA	NA	NA	NA	NA	NA	NA	58828321	58815753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_58815980_58817210_58817374_58817694_58817818_58823318_58823530_58825362_58825461_58826954_58827063_58828281
ENSMUSG00000022353.11_58815879_58828321_1	chr15	-	844	7	FSM	ENSMUSG00000022353.11	ENST00000431961.6	1677	7	120	713	120	-713	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACAGGCGGATGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	58828321	58815878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_58815980_58817210_58817374_58817694_58817818_58823318_58823530_58825362_58825461_58826954_58827063_58828281
ENSMUSG00000022354.5_58805657_58811221_1	chr15	+	536	4	FSM	ENSMUSG00000022354.5	ENSMUST00000022980.5	704	4	52	116	52	-116	multi-exon	FALSE	canonical	NA	NA	NA	NA	1986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGACCAGACCTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	58805656	58811221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_58805788_58808116_58808310_58809200_58809315_58811123
ENSMUSG00000022354.5_58808115_58811337_1	chr15	+	520	3	NNC	ENSMUSG00000022354.5	novel	704	4	NA	NA	2510	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCTGTGCCTGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	58808114	58811337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_58808314_58809207_58809315_58811123
ENSMUSG00000022354.5_58808219_58811337_1	chr15	+	419	3	ISM	ENSMUSG00000022354.5	ENSMUST00000022980.5	704	4	2614	0	2614	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCTGTGCCTGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	58808218	58811337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_58808310_58809200_58809315_58811123
ENSMUSG00000022354.5_58808219_58811337_2	chr15	+	413	3	NNC	ENSMUSG00000022354.5	novel	704	4	NA	NA	2614	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCTGTGCCTGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	58808218	58811337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_58808310_58809200_58809315_58811129
ENSMUSG00000022354.5_58808219_58811337_3	chr15	+	416	3	NNC	ENSMUSG00000022354.5	novel	704	4	NA	NA	2614	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCTGTGCCTGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	58808218	58811337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_58808314_58809207_58809315_58811123
ENSMUSG00000022358.8_58043634_58054763_1	chr15	-	1728	4	ISM	ENSMUSG00000022358.8	ENSMUST00000022986.8	6976	9	23565	4359	23260	997	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGAGTTAATTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	58054763	58043633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_58044952_58046230_58046375_58047477_58047661_58054680
ENSMUSG00000022358.8_58043842_58055760_1	chr15	-	1716	5	ISM	ENSMUSG00000022358.8	ENSMUST00000022986.8	6976	9	22568	4567	22263	789	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTCTGTTCTGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	58055760	58043841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_58044952_58046230_58046375_58047477_58047661_58054680_58054866_58055666
ENSMUSG00000022358.8_58044053_58071441_1	chr15	-	1739	8	ISM	ENSMUSG00000022358.8	ENSMUST00000022986.8	6976	9	6887	4778	6582	578	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCATGCTCAGAACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	58071441	58044052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_58044952_58046230_58046375_58047477_58047661_58054680_58054866_58055666_58055761_58068608_58068702_58069594_58069645_58071350
ENSMUSG00000022359.11_58011729_58022050_1	chr15	+	1098	6	FSM	ENSMUSG00000022359.11	ENST00000287387.7	1113	6	0	15	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTTTTGAAGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	58011728	58022050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_58011830_58014001_58014053_58015992_58016142_58016975_58017101_58021297_58021563_58021643
ENSMUSG00000022359.11_58014022_58022050_1	chr15	+	828	4	FSM	ENSMUSG00000022359.11	ENST00000518125.1	830	4	8	-6	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTTTTGAAGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	58014021	58022050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_58014053_58016975_58017101_58021297_58021563_58021643
ENSMUSG00000022364.15_57775737_57815208_1	chr15	+	1688	12	ISM	ENSMUSG00000022364.15	ENST00000521676.5	2789	19	32	12109	32	-12109	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCCCCTCTCATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	57775736	57815208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805982_57806076_57812344_57812479_57814370_57814505_57815028
ENSMUSG00000022364.15_57775743_57815138_1	chr15	+	1782	13	ISM	ENSMUSG00000022364.15	ENST00000287380.6	2959	20	38	12179	38	-12179	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGGTGGCCTACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	57775742	57815138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028
ENSMUSG00000022364.15_57779409_57816193_1	chr15	+	1806	13	ISM	ENSMUSG00000022364.15	ENST00000287380.6	2959	20	3704	11124	3704	-11124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGAGAAGTTTATCATCT	NA	NA	NA	NA	NA	NA	NA	NA	57779408	57816193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151
ENSMUSG00000022364.15_57779409_57816243_1	chr15	+	1686	12	ISM	ENSMUSG00000022364.15	ENST00000521676.5	2789	19	3704	11074	3704	-11074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCATGCTGGATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	57779408	57816243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805982_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151
ENSMUSG00000022364.15_57779409_57816278_1	chr15	+	1721	12	ISM	ENSMUSG00000022364.15	ENST00000521676.5	2789	19	3704	11039	3704	-11039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGCAGTACCCTATATTT	NA	NA	NA	NA	NA	NA	NA	NA	57779408	57816278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805982_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151
ENSMUSG00000022364.15_57783353_57816302_1	chr15	+	1785	12	ISM	ENSMUSG00000022364.15	ENST00000287380.6	2959	20	7648	11015	7648	-11015	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCCAAAGTTCATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	57783352	57816302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151
ENSMUSG00000022364.15_57783420_57816340_1	chr15	+	1756	12	ISM	ENSMUSG00000022364.15	ENST00000287380.6	2959	20	7715	10977	7715	-10977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGAAAGGATAAGGAACGA	NA	NA	NA	NA	NA	NA	NA	NA	57783419	57816340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151
ENSMUSG00000022364.15_57786349_57816385_1	chr15	+	1728	11	ISM	ENSMUSG00000022364.15	ENST00000521676.5	2789	19	10644	10932	10644	-10932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCAGAGAATAATCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	57786348	57816385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805982_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151
ENSMUSG00000022364.15_57786405_57816923_1	chr15	+	1765	12	ISM	ENSMUSG00000022364.15	ENST00000287380.6	2959	20	10700	10394	10700	-10394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTAAGGATGAGGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	57786404	57816923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883
ENSMUSG00000022364.15_57786443_57816986_1	chr15	+	1790	12	ISM	ENSMUSG00000022364.15	ENST00000287380.6	2959	20	10738	10331	10738	-10331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGATACTTCTTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	57786442	57816986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883
ENSMUSG00000022364.15_57786460_57816932_1	chr15	+	1665	12	ISM	ENSMUSG00000022364.15	ENST00000521676.5	2789	19	10755	10385	10755	-10385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGGCGTGGTACCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	57786459	57816932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805982_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883
ENSMUSG00000022364.15_57786512_57817001_1	chr15	+	1682	12	ISM	ENSMUSG00000022364.15	ENST00000521676.5	2789	19	10807	10316	10807	-10316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAGAGGAGAAGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	57786511	57817001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805982_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883
ENSMUSG00000022364.15_57786512_57817022_1	chr15	+	1757	12	ISM	ENSMUSG00000022364.15	ENST00000287380.6	2959	20	10807	10295	10807	-10295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGAGACAAAGGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	57786511	57817022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883
ENSMUSG00000022364.15_57796004_57818720_1	chr15	+	1673	12	ISM	ENSMUSG00000022364.15	ENST00000521676.5	2789	19	20299	8597	-5440	-8597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGAGGAGACGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	57796003	57818720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805982_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668
ENSMUSG00000022364.15_57796020_57818755_1	chr15	+	1746	12	ISM	ENSMUSG00000022364.15	ENST00000287380.6	2959	20	20315	8562	-5424	-8562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACGGGAAATGGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	57796019	57818755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668
ENSMUSG00000022364.15_57799485_57821825_1	chr15	+	1830	12	ISM	ENSMUSG00000022364.15	ENST00000287380.6	2959	20	23780	5492	-1959	-5492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAAGCAGCTCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	57799484	57821825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732
ENSMUSG00000022364.15_57799597_57824289_1	chr15	+	1769	13	ISM	ENSMUSG00000022364.15	ENST00000287380.6	2959	20	23892	3028	-1847	-3028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCCCATAGGCGGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	57799596	57824289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238
ENSMUSG00000022364.15_57801372_57825558_1	chr15	+	1775	13	ISM	ENSMUSG00000022364.15	ENST00000521676.5	2789	19	25667	1759	-72	-1759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGCAGCCAGGGCTACTAT	NA	NA	NA	NA	NA	NA	NA	NA	57801371	57825558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57801499_57804018_57804196_57805765_57805846_57805982_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464
ENSMUSG00000022364.15_57801425_57825542_1	chr15	+	1760	13	ISM	ENSMUSG00000022364.15	ENST00000287380.6	2959	20	25720	1775	-19	-1775	internal_fragment	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTGCCGATCAACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	57801424	57825542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464
ENSMUSG00000022364.15_57801444_57827319_1	chr15	+	1737	13	NNC	ENSMUSG00000022364.15	novel	1739	13	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGTGTCTACAGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	57801443	57827319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816891_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199
ENSMUSG00000022364.15_57801444_57827319_2	chr15	+	1741	13	FSM	ENSMUSG00000022364.15	ENST00000518805.5	1739	13	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGTGTCTACAGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	57801443	57827319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816887_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199
ENSMUSG00000022364.15_57801448_57825520_1	chr15	+	1661	13	ISM	ENSMUSG00000022364.15	ENST00000521676.5	2789	19	25743	1797	4	-1797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCAGACTTTACATAAGC	NA	NA	NA	NA	NA	NA	NA	NA	57801447	57825520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57801499_57804018_57804196_57805765_57805846_57805982_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464
ENSMUSG00000022364.15_57804017_57825659_1	chr15	+	1751	12	ISM	ENSMUSG00000022364.15	ENST00000521676.5	2789	19	28312	1658	2573	-1658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGGAAGCTTACAGACT	NA	NA	NA	NA	NA	NA	NA	NA	57804016	57825659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57804196_57805765_57805846_57805982_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464
ENSMUSG00000022364.15_57804111_57827281_1	chr15	+	1793	13	ISM	ENSMUSG00000022364.15	ENST00000287380.6	2959	20	28406	36	2667	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAGGCAGGAGACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	57804110	57827281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199
ENSMUSG00000022364.15_57804136_57827253_1	chr15	+	1686	13	ISM	ENSMUSG00000022364.15	ENST00000521676.5	2789	19	28431	64	2692	-64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTCAGATGCCTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	57804135	57827253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57804196_57805765_57805846_57805982_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199
ENSMUSG00000022364.15_57804155_57827217_1	chr15	+	1685	13	ISM	ENSMUSG00000022364.15	ENST00000287380.6	2959	20	28450	100	2711	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAATTCCATTTGCAATC	NA	NA	NA	NA	NA	NA	NA	NA	57804154	57827217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199
ENSMUSG00000022365.7_57734869_57755684_1	chr15	-	984	8	FSM	ENSMUSG00000022365.7	ENST00000405944.7	990	8	7	-1	7	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCAGGAGGGGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	57755684	57734868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_57735303_57738892_57738944_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
ENSMUSG00000022365.7_57734869_57755684_2	chr15	-	982	7	NNC	ENSMUSG00000022365.7	novel	990	8	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCAGGAGGGGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	57755684	57734868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_57735303_57738892_57738944_57740813_57740867_57741880_57742002_57743395_57743461_57746830_57746943_57755538
ENSMUSG00000022365.7_57735059_57743460_1	chr15	-	596	6	ISM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	12384	2161	12231	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACACTGAATGTAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	57743460	57735058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395
ENSMUSG00000022365.7_57735059_57743463_1	chr15	-	597	5	NNC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	12228	-182	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACACTGAATGTAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	57743463	57735058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57742002_57743395
ENSMUSG00000022365.7_57735229_57755589_1	chr15	-	589	8	FSM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	255	2331	102	-352	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATCAGAATGGCGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	57755589	57735228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
ENSMUSG00000022365.7_57738890_57755684_1	chr15	-	313	3	ISM	ENSMUSG00000022365.7	ENST00000419562.6	903	4	167	4013	7	-4013	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTCTCTTCTCTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	57755684	57738889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_57739004_57740813_57740867_57755538
ENSMUSG00000022365.7_57740813_57755844_1	chr15	-	658	5	NNC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	0	-5936	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAATGTTAGATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	57755844	57740812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_57740867_57741880_57742002_57743395_57743461_57746830_57746943_57755538
ENSMUSG00000022365.7_57740813_57755844_2	chr15	-	660	6	ISM	ENSMUSG00000022365.7	ENST00000405944.7	990	8	-153	5943	0	-5936	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAATGTTAGATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	57755844	57740812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
ENSMUSG00000022369.14_55426141_55481082_1	chr15	+	1943	16	ISM	ENSMUSG00000022369.14	ENST00000305949.6	2465	19	40	7772	40	6873	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAGTTTCTGGATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	55426140	55481082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432576_55434690_55434786_55436293_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877
ENSMUSG00000022369.14_55426412_55483088_1	chr15	+	1949	16	ISM	ENSMUSG00000022369.14	ENST00000305949.6	2465	19	311	5766	311	-5766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATCACCATCACACAGG	NA	NA	NA	NA	NA	NA	NA	NA	55426411	55483088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432576_55434690_55434786_55436293_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033
ENSMUSG00000022369.14_55426464_55483151_1	chr15	+	1960	16	ISM	ENSMUSG00000022369.14	ENST00000305949.6	2465	19	363	5703	363	-5703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTGGCCGGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	55426463	55483151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432576_55434690_55434786_55436293_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033
ENSMUSG00000022369.14_55428009_55483334_1	chr15	+	2122	15	ISM	ENSMUSG00000022369.14	ENST00000305949.6	2465	19	1908	5520	1908	-5520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAGAAAACCATATGCC	NA	NA	NA	NA	NA	NA	NA	NA	55428008	55483334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55428068_55429589_55429735_55430573_55430692_55432441_55432576_55434690_55434786_55436293_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033
ENSMUSG00000022369.14_55429671_55484068_1	chr15	+	1969	15	ISM	ENSMUSG00000022369.14	ENST00000305949.6	2465	19	3570	4786	3570	-4786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCATGAGAGCTTCACGG	NA	NA	NA	NA	NA	NA	NA	NA	55429670	55484068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55429735_55430573_55430692_55432441_55432576_55434690_55434786_55436293_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018
ENSMUSG00000022369.14_55430574_55488856_1	chr15	+	2039	15	ISM	ENSMUSG00000022369.14	ENST00000305949.6	2465	19	4473	-2	4473	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTCTCAAACAGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	55430573	55488856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55430692_55432441_55432576_55434690_55434786_55436293_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786
ENSMUSG00000022370.14_55397490_55420957_1	chr15	-	1036	7	FSM	ENSMUSG00000022370.14	ENSMUST00000172387.8	1223	7	187	0	187	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	55420957	55397489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55411537_55411632_55418715_55418840_55420653
ENSMUSG00000022371.17_55192609_55242959_1	chr15	+	1086	9	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	21390	140106	21294	-140106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATGGTTAACTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	55192608	55242959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55192677_55201801_55201919_55205076_55205221_55208265_55208356_55225777_55225934_55226846_55226967_55229444_55229610_55235967_55236130_55242895
ENSMUSG00000022371.17_55205159_55245878_1	chr15	+	1094	9	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	33940	137187	33844	-137187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCAGGTGGGATGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	55205158	55245878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55205221_55208265_55208356_55225777_55225934_55226846_55226967_55229444_55229610_55235967_55236130_55242895_55243048_55244122_55244253_55245821
ENSMUSG00000022371.17_55225776_55249738_1	chr15	+	1163	8	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	54557	133327	54461	-133327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGGGCAGGGATTCA	NA	NA	NA	NA	NA	NA	NA	NA	55225775	55249738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55225934_55226846_55226967_55229444_55229610_55235967_55236130_55242895_55243048_55244122_55244253_55245821_55245968_55249608
ENSMUSG00000022371.17_55226846_55251995_1	chr15	+	1056	8	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	55627	131070	55531	-131070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCTCGGTTAACCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	55226845	55251995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55226967_55229444_55229610_55235967_55236130_55242895_55243048_55244122_55244253_55245821_55245968_55249608_55249739_55251945
ENSMUSG00000022371.17_55226868_55252085_1	chr15	+	1124	8	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	55649	130980	55553	-130980	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGCGGGCCGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	55226867	55252085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55226967_55229444_55229610_55235967_55236130_55242895_55243048_55244122_55244253_55245821_55245968_55249608_55249739_55251945
ENSMUSG00000022371.17_55229442_55270157_1	chr15	+	1155	8	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	58223	112908	58127	-112908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCTTCTTCTGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	55229441	55270157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55229610_55235967_55236130_55242895_55243048_55244122_55244253_55245821_55245968_55249608_55249739_55251945_55252086_55270030
ENSMUSG00000022371.17_55229553_55271157_1	chr15	+	1086	9	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	58334	111908	58238	-111908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGACAGTTTTCGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	55229552	55271157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55229610_55235967_55236130_55242895_55243048_55244122_55244253_55245821_55245968_55249608_55249739_55251945_55252086_55270030_55270158_55271115
ENSMUSG00000022371.17_55242972_55273632_1	chr15	+	1082	9	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	71753	109433	71657	-109433	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGACACTCAGATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	55242971	55273632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55243048_55244122_55244253_55245821_55245968_55249608_55249739_55251945_55252086_55270030_55270158_55271115_55271256_55272211_55272345_55273572
ENSMUSG00000022371.17_55244149_55275074_1	chr15	+	1089	9	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	72930	107991	72834	-107991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAAAGCCCAAGGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	55244148	55275074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55244253_55245821_55245968_55249608_55249739_55251945_55252086_55270030_55270158_55271115_55271256_55272211_55272345_55273572_55273633_55274965
ENSMUSG00000022371.17_55244215_55275117_1	chr15	+	1066	9	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	72996	107948	72900	-107948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTATAACTACTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	55244214	55275117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55244253_55245821_55245968_55249608_55249739_55251945_55252086_55270030_55270158_55271115_55271256_55272211_55272345_55273572_55273633_55274965
ENSMUSG00000022371.17_55245939_55284269_1	chr15	+	1097	10	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	74720	98796	74624	-98796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATTACATGGGACCCACC	NA	NA	NA	NA	NA	NA	NA	NA	55245938	55284269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55245968_55249608_55249739_55251945_55252086_55270030_55270158_55271115_55271256_55272211_55272345_55273572_55273633_55274965_55275118_55282083_55282214_55284213
ENSMUSG00000022371.17_55252047_55291328_1	chr15	+	1103	10	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	80828	91737	80732	-91737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGCTCGGTGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	55252046	55291328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55252086_55270030_55270158_55271115_55271256_55272211_55272345_55273572_55273633_55274965_55275118_55282083_55282214_55284213_55284337_55286776_55286927_55291279
ENSMUSG00000022371.17_55271164_55300471_1	chr15	+	1092	9	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	99945	82594	99849	-82594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAGAAAACACGTAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	55271163	55300471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55271256_55272211_55272345_55273572_55273633_55274965_55275118_55282083_55282214_55284213_55284337_55286776_55286927_55291279_55291397_55300336
ENSMUSG00000022371.17_55272260_55308055_1	chr15	+	1128	10	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	101041	75010	100945	-75010	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGGACAAGATTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	55272259	55308055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55272345_55273572_55273633_55274965_55275118_55282083_55282214_55284213_55284337_55286776_55286927_55291279_55291397_55300336_55300484_55304695_55304753_55307948
ENSMUSG00000022371.17_55275053_55309570_1	chr15	+	1074	10	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	103834	73495	103738	-73495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATACCTTATTTACATCA	NA	NA	NA	NA	NA	NA	NA	NA	55275052	55309570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55275118_55282083_55282214_55284213_55284337_55286776_55286927_55291279_55291397_55300336_55300484_55304695_55304753_55307948_55308089_55309132_55309257_55309549
ENSMUSG00000022371.17_55282099_55309677_1	chr15	+	1101	9	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	110880	73388	110784	-73388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATGCAGGCAGATGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	55282098	55309677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55282214_55284213_55284337_55286776_55286927_55291279_55291397_55300336_55300484_55304695_55304753_55307948_55308089_55309132_55309257_55309549
ENSMUSG00000022371.17_55284214_55310925_1	chr15	+	1167	9	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	112995	72140	112899	-72140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTCCTTGAGAACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55284213	55310925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55284337_55286776_55286927_55291279_55291397_55300336_55300484_55304695_55304753_55307948_55308089_55309132_55309257_55309549_55309694_55310760
ENSMUSG00000022371.17_55286831_55312188_1	chr15	+	1090	10	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	115612	70877	115516	-70877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGGAACCTGGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	55286830	55312188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55286927_55291279_55291397_55300336_55300484_55304695_55304753_55307948_55308089_55309132_55309257_55309549_55309694_55310760_55310926_55311593_55311633_55312127
ENSMUSG00000022371.17_55291332_55313261_1	chr15	+	1086	10	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	120113	69804	120017	-69804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCACAGGAGCCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	55291331	55313261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55291397_55300336_55300484_55304695_55304753_55307948_55308089_55309132_55309257_55309549_55309694_55310760_55310926_55311593_55311633_55312127_55312267_55313195
ENSMUSG00000022371.17_55300398_55315718_1	chr15	+	1088	10	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	129179	67347	129083	-67347	internal_fragment	TRUE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTCACTTTTGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	55300397	55315718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55300484_55304695_55304753_55307948_55308089_55309132_55309257_55309549_55309694_55310760_55310926_55311593_55311633_55312127_55312267_55313195_55313339_55315667
ENSMUSG00000022371.17_55307978_55318697_1	chr15	+	1099	9	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	136759	64368	136663	-64368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGATCAAGAGGACCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	55307977	55318697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55308089_55309132_55309257_55309549_55309694_55310760_55310926_55311593_55311633_55312127_55312267_55313195_55313339_55315667_55315778_55318573
ENSMUSG00000022371.17_55309640_55335085_1	chr15	+	1097	11	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	138421	47980	138325	-47980	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTCTGTCCATTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	55309639	55335085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55309694_55310760_55310926_55311593_55311633_55312127_55312267_55313195_55313339_55315667_55315778_55318573_55318733_55327081_55327160_55329993_55330081_55331355_55331410_55335016
ENSMUSG00000022371.17_55310805_55336729_1	chr15	+	1134	12	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	139586	46336	139490	-46336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACTTGCTAAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	55310804	55336729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55310926_55311593_55311633_55312127_55312267_55313195_55313339_55315667_55315778_55318573_55318733_55327081_55327160_55329993_55330081_55331355_55331410_55335016_55335113_55336322_55336377_55336675
ENSMUSG00000022371.17_55312222_55361850_1	chr15	+	1081	14	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	141003	21215	140907	-21215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCAAGTATGCGAGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	55312221	55361850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55312267_55313195_55313339_55315667_55315778_55318573_55318733_55327081_55327160_55329993_55330081_55331355_55331410_55335016_55335113_55336322_55336377_55336675_55336730_55351327_55351382_55351861_55351934_55360873_55360910_55361811
ENSMUSG00000022371.17_55313207_55364816_1	chr15	+	1095	14	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	141988	18249	141892	-18249	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTCCTCATCTATCCGG	NA	NA	NA	NA	NA	NA	NA	NA	55313206	55364816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55313339_55315667_55315778_55318573_55318733_55327081_55327160_55329993_55330081_55331355_55331410_55335016_55335113_55336322_55336377_55336675_55336730_55351327_55351382_55351861_55351934_55360873_55360910_55361811_55361879_55364774
ENSMUSG00000022371.17_55313272_55364864_1	chr15	+	1078	14	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	142053	18201	141957	-18201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACCAGGTTCACCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	55313271	55364864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55313339_55315667_55315778_55318573_55318733_55327081_55327160_55329993_55330081_55331355_55331410_55335016_55335113_55336322_55336377_55336675_55336730_55351327_55351382_55351861_55351934_55360873_55360910_55361811_55361879_55364774
ENSMUSG00000022371.17_55318646_55381668_1	chr15	+	1097	14	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	147427	1397	147331	-1397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGGTCCTTCTGGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	55318645	55381668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55318733_55327081_55327160_55329993_55330081_55331355_55331410_55335016_55335113_55336322_55336377_55336675_55336730_55351327_55351382_55351861_55351934_55360873_55360910_55361811_55361879_55364774_55364964_55379559_55379638_55381577
ENSMUSG00000022371.17_55327107_55382576_1	chr15	+	1094	14	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	155888	489	155792	-489	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGGTTGCATTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	55327106	55382576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55327160_55329993_55330081_55331355_55331410_55335016_55335113_55336322_55336377_55336675_55336730_55351327_55351382_55351861_55351934_55360873_55360910_55361811_55361879_55364774_55364964_55379559_55379638_55381577_55381734_55382532
ENSMUSG00000022371.17_55335034_55382785_1	chr15	+	1092	11	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	163815	280	163719	-280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAACCATAGTAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	55335033	55382785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55335113_55336322_55336377_55336675_55336730_55351327_55351382_55351861_55351934_55360873_55360910_55361811_55361879_55364774_55364964_55379559_55379638_55381577_55381734_55382532
ENSMUSG00000022371.17_55336677_55382921_1	chr15	+	1094	9	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	165458	144	165362	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTGCTCCACCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	55336676	55382921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55336730_55351327_55351382_55351861_55351934_55360873_55360910_55361811_55361879_55364774_55364964_55379559_55379638_55381577_55381734_55382532
ENSMUSG00000022371.17_55351862_55383085_1	chr15	+	1151	7	ISM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	180643	-20	180547	20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCATGGTTCCAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55351861	55383085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55351934_55360873_55360910_55361811_55361879_55364774_55364964_55379559_55379638_55381577_55381734_55382532
ENSMUSG00000022372.15_66654391_66664133_1	chr15	-	518	4	NNC	ENSMUSG00000022372.15	novel	1143	8	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTGGCTTGTACACACA	NA	NA	NA	NA	NA	NA	NA	NA	66664133	66654390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_66654597_66655457_66655606_66661530_66661635_66664073
ENSMUSG00000022372.15_66654391_66664133_2	chr15	-	526	4	FSM	ENSMUSG00000022372.15	ENST00000517648.5	546	4	27	-7	27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTGGCTTGTACACACA	NA	NA	NA	NA	NA	NA	NA	NA	66664133	66654390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_66654605_66655457_66655606_66661530_66661635_66664073
ENSMUSG00000022377.17_63958960_63960125_1	chr15	-	293	2	NNC	ENSMUSG00000022377.17	novel	6164	28	NA	NA	224363	-254	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTATTTTCCTGTTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	63960125	63958959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_63959158_63960030
ENSMUSG00000022377.17_63959029_63960192_1	chr15	-	291	2	NNC	ENSMUSG00000022377.17	novel	6164	28	NA	NA	224296	-323	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAGAAAGATCAAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	63960192	63959028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_63959158_63960030
ENSMUSG00000022377.17_63959083_63960248_1	chr15	-	293	2	NNC	ENSMUSG00000022377.17	novel	6164	28	NA	NA	224240	-377	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTATCTACAGTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	63960248	63959082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_63959158_63960030
ENSMUSG00000022377.17_63961023_64063415_1	chr15	-	3350	26	ISM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	121073	638	121073	273	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAAACAAAAACCAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	64063415	63961022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332
ENSMUSG00000022377.17_64184197_64254586_1	chr15	-	306	3	ISM	ENSMUSG00000022377.17	ENST00000518721.6	5316	31	81	225493	0	-222901	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCGGCGGCCTGGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	64254586	64184196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_64184325_64221676_64221763_64254494
ENSMUSG00000022378.15_63802791_63821949_1	chr15	-	1549	9	ISM	ENSMUSG00000022378.15	ENSMUST00000164532.3	1770	12	47869	0	47869	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	63821949	63802790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854
ENSMUSG00000022378.15_63802974_63828501_1	chr15	-	1446	10	ISM	ENSMUSG00000022378.15	ENSMUST00000164532.3	1770	12	41317	183	41317	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAAGACTTTGTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	63828501	63802973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448
ENSMUSG00000022378.15_63803192_63932179_1	chr15	-	1484	13	FSM	ENSMUSG00000022378.15	ENSMUST00000228226.2	1896	13	13	399	13	-399	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCTGTGACTTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	63932179	63803191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
ENSMUSG00000022385.12_85744251_85746683_1	chr15	+	519	3	ISM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	104	14091	104	-14048	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGGCCTGCTCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	85744250	85746683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85744297_85746101_85746160_85746268
ENSMUSG00000022385.12_85746577_85751713_1	chr15	+	514	3	ISM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	2430	9061	2430	-9018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGGCAATCTCACAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	85746576	85751713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85746897_85748307_85748464_85751675
ENSMUSG00000022385.12_85746823_85753070_1	chr15	+	547	4	ISM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	2676	7704	2676	-7661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTGAGTCCTCTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	85746822	85753070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85746897_85748307_85748464_85751675_85751803_85752880
ENSMUSG00000022385.12_85753032_85759230_1	chr15	+	592	4	ISM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	8885	1544	8885	-1501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTCAGATGAGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	85753031	85759230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85753259_85755709_85755783_85757840_85758078_85759175
ENSMUSG00000022385.12_85753181_85759339_1	chr15	+	552	4	ISM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	9034	1435	9034	-1392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGGTGAAGCAGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	85753180	85759339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85753259_85755709_85755783_85757840_85758078_85759175
ENSMUSG00000022385.12_85758017_85760428_1	chr15	+	600	4	ISM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	13870	346	13870	-303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGCAGCGCACAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	85758016	85760428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85758078_85759175_85759420_85759736_85759953_85760349
ENSMUSG00000022385.12_85759297_85760589_1	chr15	+	579	3	ISM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	15150	185	15150	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTGGCTGCCCTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	85759296	85760589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85759420_85759736_85759953_85760349
ENSMUSG00000022386.13_85766873_85781358_1	chr15	+	1071	9	FSM	ENSMUSG00000022386.13	ENST00000643137.1	1071	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCACCCCACATCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	85766872	85781358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85778081_85778154_85778222_85779126_85779228_85780560_85780706_85781225
ENSMUSG00000022386.13_85766873_85781358_2	chr15	+	1065	9	NNC	ENSMUSG00000022386.13	novel	1071	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCACCCCACATCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	85766872	85781358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_85767035_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85778081_85778154_85778222_85779126_85779228_85780560_85780706_85781225
ENSMUSG00000022386.13_85766933_85781358_1	chr15	+	1011	9	FSM	ENSMUSG00000022386.13	ENST00000643137.1	1071	9	60	0	60	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCACCCCACATCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	85766932	85781358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85778081_85778154_85778222_85779126_85779228_85780560_85780706_85781225
ENSMUSG00000022389.16_81686795_81708697_1	chr15	+	1863	4	FSM	ENSMUSG00000022389.16	ENSMUST00000109553.10	4403	4	173	2367	173	-2202	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTATCCCTTCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	81686794	81708697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_81687088_81699144_81699463_81705399_81705621_81707666
ENSMUSG00000022389.16_81699332_81709122_1	chr15	+	1808	3	ISM	ENSMUSG00000022389.16	ENSMUST00000023024.8	4079	4	3717	1777	3717	-1777	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCAGTTTTGGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	81699331	81709122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81699463_81705399_81705621_81707666
ENSMUSG00000022391.17_81588454_81589777_1	chr15	-	1130	2	ISM	ENSMUSG00000022391.17	ENSMUST00000170134.9	2984	17	24325	5	24286	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	81589777	81588453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81589460_81589653
ENSMUSG00000022391.17_81588668_81600836_1	chr15	-	1946	11	ISM	ENSMUSG00000022391.17	ENSMUST00000171115.3	2743	17	13227	-144	13227	144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGAAGGGCAGGTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	81600836	81588667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767
ENSMUSG00000022391.17_81588812_81594661_1	chr15	-	1182	6	ISM	ENSMUSG00000022391.17	ENSMUST00000171115.3	2743	17	19402	0	19402	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAACAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	81594661	81588811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561
ENSMUSG00000022391.17_81588989_81594737_1	chr15	-	1081	6	ISM	ENSMUSG00000022391.17	ENSMUST00000171115.3	2743	17	19326	177	19326	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGAGATGGGCTATCAT	NA	NA	NA	NA	NA	NA	NA	NA	81594737	81588988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561
ENSMUSG00000022391.17_81589732_81600825_1	chr15	-	1065	10	ISM	ENSMUSG00000022391.17	ENSMUST00000171115.3	2743	17	13238	920	13238	-920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGTTGAACCACGTGG	NA	NA	NA	NA	NA	NA	NA	NA	81600825	81589731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767
ENSMUSG00000022391.17_81590642_81603023_1	chr15	-	1049	9	ISM	ENSMUSG00000022391.17	ENSMUST00000171115.3	2743	17	11040	1830	11040	-1830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGACGCCTCAGTAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	81603023	81590641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943
ENSMUSG00000022391.17_81594690_81608708_1	chr15	-	1048	10	ISM	ENSMUSG00000022391.17	ENSMUST00000171115.3	2743	17	5355	5878	5355	-5878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGAGGATGAGGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	81608708	81594689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686
ENSMUSG00000022391.17_81595675_81608833_1	chr15	-	1108	9	ISM	ENSMUSG00000022391.17	ENSMUST00000171115.3	2743	17	5230	6863	5230	-6863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGCAACTCTGGGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	81608833	81595674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686
ENSMUSG00000022391.17_81595870_81614063_1	chr15	-	1147	9	ISM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	141	7416	0	-7058	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCTGGAGAAGCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	81614063	81595869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ENSMUSG00000022391.17_81597022_81614204_1	chr15	-	1099	7	ISM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	0	8568	0	-8210	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGGCAGGTGTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	81614204	81597021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ENSMUSG00000022400.10_81350497_81360004_1	chr15	+	1109	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	0	566	0	417	multi-exon	FALSE	canonical	NA	NA	NA	NA	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTGTTTCTAAAACAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	81350496	81360004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ENSMUSG00000022400.10_81350497_81360108_1	chr15	+	1213	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	0	462	0	-462	multi-exon	FALSE	canonical	NA	NA	NA	NA	2279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTAGAAATTGAATTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	81350496	81360108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ENSMUSG00000022400.10_81352354_81360108_1	chr15	+	1060	4	ISM	ENSMUSG00000022400.10	ENSMUST00000230062.2	651	5	1512	-521	1512	-462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTAGAAATTGAATTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	81352353	81360108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81352435_81355152_81355224_81358043_81358130_81359286
ENSMUSG00000022400.10_81358074_81360312_1	chr15	+	1082	2	ISM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	7577	258	7232	-258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGGGAAGGAGCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	81358073	81360312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81358130_81359286
ENSMUSG00000022403.16_81249651_81272548_1	chr15	-	811	9	FSM	ENSMUSG00000022403.16	ENST00000453250.1	866	9	55	0	55	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAAGCCCTTGCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	81272548	81249650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262187_81267176_81267248_81272530
ENSMUSG00000022403.16_81249651_81272603_1	chr15	-	859	9	NNC	ENSMUSG00000022403.16	novel	866	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAAGCCCTTGCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	81272603	81249650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_81249780_81250547_81250691_81253594_81253637_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262187_81267176_81267248_81272530
ENSMUSG00000022403.16_81249651_81272603_2	chr15	-	862	9	NIC	ENSMUSG00000022403.16	novel	866	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAAGCCCTTGCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	81272603	81249650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262187_81267180_81267248_81272530
ENSMUSG00000022403.16_81267222_81272603_1	chr15	-	99	2	ISM	ENSMUSG00000022403.16	ENST00000453250.1	866	9	0	17571	0	-17571	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGAAGAAGGGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	81272603	81267221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81267248_81272530
ENSMUSG00000022404.9_81203339_81211337_1	chr15	-	818	3	ISM	ENSMUSG00000022404.9	ENSMUST00000023040.9	1724	9	33676	227	33676	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTATTTATTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	81211337	81203338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81203978_81207810_81207894_81211241
ENSMUSG00000022404.9_81203587_81213367_1	chr15	-	833	5	ISM	ENSMUSG00000022404.9	ENSMUST00000023040.9	1724	9	31646	475	31646	-475	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGTTAGTTTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	81213367	81203586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250
ENSMUSG00000022404.9_81203587_81213369_1	chr15	-	830	5	NNC	ENSMUSG00000022404.9	novel	1724	9	NA	NA	31644	-475	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGTTAGTTTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	81213369	81203586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_81203978_81207815_81207894_81211241_81211338_81211417_81211564_81213250
ENSMUSG00000022407.11_80832738_80851915_1	chr15	+	1019	9	FSM	ENSMUSG00000022407.11	ENST00000623632.4	1025	9	-47	53	18	-53	multi-exon	FALSE	canonical	NA	NA	NA	NA	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGCACTTGCTGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	80832737	80851915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80851312_80851403_80851789
ENSMUSG00000022407.11_80832738_80853209_1	chr15	+	1726	13	FSM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	47	1938	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGCAACCACATGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	80832737	80853209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ENSMUSG00000022407.11_80836395_80853320_1	chr15	+	1676	12	ISM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	3704	1827	3610	111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	80836394	80853320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ENSMUSG00000022407.11_80839826_80853459_1	chr15	+	1603	11	ISM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	7135	1688	7041	250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCCTCATCTCCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	80839825	80853459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ENSMUSG00000022407.11_80840477_80853589_1	chr15	+	1630	10	ISM	ENSMUSG00000022407.11	ENSMUST00000168756.8	1439	12	7757	-640	7692	380	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGTTTCCTCACTTACA	NA	NA	NA	NA	NA	NA	NA	NA	80840476	80853589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ENSMUSG00000022407.11_80845575_80853845_1	chr15	+	1679	8	ISM	ENSMUSG00000022407.11	ENSMUST00000168756.8	1439	12	12855	-896	12790	636	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGGATTCATGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	80845574	80853845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ENSMUSG00000022407.11_80847891_80854011_1	chr15	+	1695	6	ISM	ENSMUSG00000022407.11	ENSMUST00000168756.8	1439	12	15171	-1062	15106	802	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAAACTGATTGCATTA	NA	NA	NA	NA	NA	NA	NA	NA	80847890	80854011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ENSMUSG00000022407.11_80850373_80854210_1	chr15	+	1626	4	ISM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	17682	937	17588	-937	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTAAGGGCCTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80850372	80854210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_80850384_80851312_80851403_80851789_80851967_80852862
ENSMUSG00000022407.11_80851373_80854312_1	chr15	+	1657	3	ISM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	18682	835	18588	-835	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGCACATAACCGCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	80851372	80854312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_80851403_80851789_80851967_80852862
ENSMUSG00000022407.11_80851914_80854438_1	chr15	+	1629	2	ISM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	19223	709	19129	-709	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCTGTAGATCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	80851913	80854438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_80851967_80852862
ENSMUSG00000022414.9_80017358_80044631_1	chr15	+	1657	11	FSM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	30	1277	30	-1277	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTGAGTACAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	80017357	80044631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_80017390_80032427_80032565_80032887_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ENSMUSG00000022414.9_80032491_80044767_1	chr15	+	1698	10	ISM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	15163	1141	15163	-1141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGACTAGCAAGATGCCG	NA	NA	NA	NA	NA	NA	NA	NA	80032490	80044767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_80032565_80032887_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ENSMUSG00000022414.9_80032938_80044871_1	chr15	+	1678	9	ISM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	15610	1037	15610	-1037	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTCTGCGAGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	80032937	80044871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ENSMUSG00000022414.9_80032991_80044919_1	chr15	+	1673	9	ISM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	15663	989	15663	-989	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTCAGCCCAAACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	80032990	80044919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ENSMUSG00000022414.9_80034724_80045134_1	chr15	+	1654	7	ISM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	17396	774	17396	-774	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGGGGTGCAGTTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	80034723	80045134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ENSMUSG00000022414.9_80037882_80045340_1	chr15	+	1654	5	ISM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	20554	568	20554	-568	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGATACGGCTGTGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	80037881	80045340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ENSMUSG00000022414.9_80039995_80045441_1	chr15	+	1655	4	ISM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	22667	467	22667	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGGCCCTGACTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	80039994	80045441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_80040103_80041804_80042028_80042951_80043109_80044274
ENSMUSG00000022414.9_80042949_80045754_1	chr15	+	1640	2	ISM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	25621	154	25621	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCCACTAGGAAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	80042948	80045754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_80043109_80044274
ENSMUSG00000022415.13_79994676_79997398_1	chr15	+	385	3	ISM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	19141	244	19131	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGAGCTTACCTTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	79994675	79997398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_79994883_79995799_79995946_79997366
ENSMUSG00000022415.13_79994712_79997464_1	chr15	+	415	3	ISM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	19177	178	19167	-178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGACAGGGAGTCTACAC	NA	NA	NA	NA	NA	NA	NA	NA	79994711	79997464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_79994883_79995799_79995946_79997366
ENSMUSG00000022415.13_79994800_79997501_1	chr15	+	364	3	ISM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	19265	141	19255	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGATGTGTGATCACTA	NA	NA	NA	NA	NA	NA	NA	NA	79994799	79997501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_79994883_79995799_79995946_79997366
ENSMUSG00000022415.13_79995799_79997642_1	chr15	+	423	2	ISM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	20264	0	20254	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	898	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCCTGTGTGGATTA	NA	NA	NA	NA	NA	NA	NA	NA	79995798	79997642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_79995946_79997366
ENSMUSG00000022415.13_79995826_79997646_1	chr15	+	400	2	ISM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	20291	-4	20281	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTGTGTGGATTAGACA	NA	NA	NA	NA	NA	NA	NA	NA	79995825	79997646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_79995946_79997366
ENSMUSG00000022415.13_79995890_79997683_1	chr15	+	373	2	ISM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	20355	-41	20345	41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	872	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATTGGCTGGGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	79995889	79997683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_79995946_79997366
ENSMUSG00000022419.17_55044314_55081661_1	chr15	+	615	5	ISM	ENSMUSG00000022419.17	ENSMUST00000100660.11	1377	9	68494	2075	47482	-2075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGAAGGTACAGTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	55044313	55081661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564
ENSMUSG00000022420.17_79646338_79658617_1	chr15	-	737	4	FSM	ENSMUSG00000022420.17	ENSMUST00000023055.8	1472	4	51	684	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGGGTGGGGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	79658617	79646337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_79646727_79647710_79647795_79649016_79649223_79658559
ENSMUSG00000022425.17_54702665_54707931_1	chr15	-	425	2	ISM	ENSMUSG00000022425.17	ENST00000522167.5	1715	14	28891	42	28891	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAATGAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	54707931	54702664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_54702933_54707774
ENSMUSG00000022425.17_54702885_54711594_1	chr15	-	440	5	ISM	ENSMUSG00000022425.17	ENST00000522167.5	1715	14	25228	262	25228	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTCGGGTGAGGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	54711594	54702884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_54702933_54707774_54707932_54709208_54709342_54710644_54710723_54711570
ENSMUSG00000022425.17_54707878_54713438_1	chr15	-	453	5	ISM	ENSMUSG00000022425.17	ENST00000522167.5	1715	14	23384	5255	23384	-5116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCCTGGACTTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	54713438	54707877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_54707932_54709208_54709342_54710644_54710723_54711570_54711707_54713386
ENSMUSG00000022425.17_54711658_54727153_1	chr15	-	431	5	ISM	ENSMUSG00000022425.17	ENST00000522167.5	1715	14	9669	9035	9669	-8896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCGTGTATCTCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	54727153	54711657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_54711707_54713386_54713524_54723438_54723491_54725905_54726079_54727133
ENSMUSG00000022425.17_54726006_54733657_1	chr15	-	468	6	ISM	ENSMUSG00000022425.17	ENST00000522167.5	1715	14	3165	23383	3165	-23244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGCCAACCCTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	54733657	54726005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_54726079_54727133_54727222_54727379_54727468_54729307_54729436_54730124_54730157_54733598
ENSMUSG00000022425.17_54727204_54736792_1	chr15	-	439	6	ISM	ENSMUSG00000022425.17	ENST00000522167.5	1715	14	30	24581	30	-24442	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCCAACTTTTAAGTACAG	NA	NA	NA	NA	NA	NA	NA	NA	54736792	54727203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_54727222_54727379_54727468_54729307_54729436_54730124_54730157_54733598_54733725_54736745
ENSMUSG00000022426.7_79558776_79560000_1	chr15	-	508	2	ISM	ENSMUSG00000022426.7	ENST00000683374.1	2318	5	11697	342	11697	-324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGGCCTGTGCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	79560000	79558775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79559207_79559923
ENSMUSG00000022426.7_79559017_79560245_1	chr15	-	512	2	ISM	ENSMUSG00000022426.7	ENST00000683374.1	2318	5	11452	583	11452	-565	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCAGAGGCCTCGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	79560245	79559016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79559207_79559923
ENSMUSG00000022426.7_79559099_79560299_1	chr15	-	484	2	ISM	ENSMUSG00000022426.7	ENST00000683374.1	2318	5	11398	665	11398	-647	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTGTGACTGGAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	79560299	79559098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79559207_79559923
ENSMUSG00000022426.7_79559190_79561326_1	chr15	-	503	3	ISM	ENSMUSG00000022426.7	ENST00000683374.1	2318	5	10371	756	10371	-738	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCCTGCTTCTTCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	79561326	79559189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79559207_79559923_79560381_79561297
ENSMUSG00000022426.7_79560112_79561628_1	chr15	-	493	3	ISM	ENSMUSG00000022426.7	ENST00000683374.1	2318	5	10069	1678	10069	-1660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTAGGAGCTCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	79561628	79560111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79560381_79561297_79561493_79561599
ENSMUSG00000022426.7_79560238_79570966_1	chr15	-	500	4	FSM	ENSMUSG00000022426.7	ENSMUST00000023061.7	3440	4	1154	1786	731	-1786	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTGTGGCCTCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	79570966	79560237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_79560381_79561297_79561493_79561599_79561729_79570933
ENSMUSG00000022426.7_79560275_79571036_1	chr15	-	533	4	FSM	ENSMUSG00000022426.7	ENSMUST00000023061.7	3440	4	1084	1823	661	-1823	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACCCTCTTTGTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	79571036	79560274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_79560381_79561297_79561493_79561599_79561729_79570933
ENSMUSG00000022426.7_79560353_79571067_1	chr15	-	486	4	FSM	ENSMUSG00000022426.7	ENSMUST00000023061.7	3440	4	1053	1901	630	-1901	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGTGAACTCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	79571067	79560352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_79560381_79561297_79561493_79561599_79561729_79570933
ENSMUSG00000022426.7_79561417_79571201_1	chr15	-	473	3	ISM	ENSMUSG00000022426.7	ENST00000683374.1	2318	5	496	2983	496	-2965	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGTTGCCTCTCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	79571201	79561416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79561493_79561599_79561729_79570933
ENSMUSG00000022426.7_79561629_79571321_1	chr15	-	488	2	ISM	ENSMUSG00000022426.7	ENST00000683374.1	2318	5	376	3195	376	-3177	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGCTGTTTGGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	79571321	79561628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79561729_79570933
ENSMUSG00000022426.7_79561683_79571375_1	chr15	-	488	2	ISM	ENSMUSG00000022426.7	ENST00000683374.1	2318	5	322	3249	322	-3231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATGGGAACTATGATGT	NA	NA	NA	NA	NA	NA	NA	NA	79571375	79561682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79561729_79570933
ENSMUSG00000022426.7_79561713_79571452_1	chr15	-	535	2	ISM	ENSMUSG00000022426.7	ENST00000683374.1	2318	5	245	3279	245	-3261	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTGACGCCCCACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	79571452	79561712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79561729_79570933
ENSMUSG00000022427.5_79555082_79557159_1	chr15	+	1101	4	NNC	ENSMUSG00000022427.5	novel	1569	4	NA	NA	20	278	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCTGTTTCAACCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	79555081	79557159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_79555210_79555373_79555487_79556097_79556216_79556417
ENSMUSG00000022427.5_79555082_79557159_2	chr15	+	1107	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	20	442	20	278	multi-exon	FALSE	canonical	NA	NA	NA	NA	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCTGTTTCAACCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	79555081	79557159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
ENSMUSG00000022428.9_79543400_79551626_1	chr15	+	912	5	FSM	ENSMUSG00000022428.9	ENSMUST00000023064.9	1147	5	0	235	0	-235	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGGGGTTTGGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	79543399	79551626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_79543495_79545571_79545726_79549846_79549953_79550031_79550151_79551188
ENSMUSG00000022428.9_79545570_79551743_1	chr15	+	936	4	ISM	ENSMUSG00000022428.9	ENSMUST00000023064.9	1147	5	2170	118	2170	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCCCTCATCCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	79545569	79551743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_79545726_79549846_79549953_79550031_79550151_79551188
ENSMUSG00000022428.9_79549847_79551861_1	chr15	+	898	3	ISM	ENSMUSG00000022428.9	ENSMUST00000023064.9	1147	5	6447	0	6447	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGTGTAGCAAAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	79549846	79551861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_79549953_79550031_79550151_79551188
ENSMUSG00000022432.8_84949275_84951983_1	chr15	-	189	3	ISM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	64182	385	64179	-385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGACCTTTCCAAGTATC	NA	NA	NA	NA	NA	NA	NA	NA	84951983	84949274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_84949307_84950419_84950531_84951937
ENSMUSG00000022432.8_84950479_84953914_1	chr15	-	191	3	ISM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	62251	1589	62248	-59	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCTGAAAGAGGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	84953914	84950478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_84950531_84951937_84952008_84953845
ENSMUSG00000022432.8_84953902_84955072_1	chr15	-	188	2	ISM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	61093	5012	61090	-3482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCAGGGGGAGAAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	84955072	84953901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_84953998_84954980
ENSMUSG00000022432.8_84955097_84955941_1	chr15	-	198	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	60221	4677	60221	-4677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGTTTGAACAGGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	84955941	84955096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_84955136_84955782
ENSMUSG00000022432.8_84955899_84973845_1	chr15	-	190	3	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	42317	5479	42317	-5479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTACAGCAAGTAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	84973845	84955898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_84955940_84970293_84970390_84973792
ENSMUSG00000022432.8_84973793_84975116_1	chr15	-	198	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	41046	23373	41046	-23373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCTAGCCAATAACATAC	NA	NA	NA	NA	NA	NA	NA	NA	84975116	84973792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_84973947_84975072
ENSMUSG00000022432.8_84976231_84981746_1	chr15	-	203	3	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	34416	25811	34416	-25811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAGCTTAAGAAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	84981746	84976230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_84976286_84980846_84980954_84981705
ENSMUSG00000022432.8_84982142_84991229_1	chr15	-	204	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	24933	31722	24933	-31722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACTAGAGATGATTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84991229	84982141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_84982235_84991118
ENSMUSG00000022432.8_84982211_84991267_1	chr15	-	173	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	24895	31791	24895	-31791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAGATCTGAAGCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	84991267	84982210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_84982235_84991118
ENSMUSG00000022432.8_84991130_84994909_1	chr15	-	193	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	21253	40710	21253	-40710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGCTAAAGGTAAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	84994909	84991129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_84991266_84994852
ENSMUSG00000022432.8_84991188_84994957_1	chr15	-	183	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	21205	40768	21205	-40768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGCTGGGATGAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	84994957	84991187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_84991266_84994852
ENSMUSG00000022432.8_84994898_84996943_1	chr15	-	191	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	19219	44478	19219	-44478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGCAAGACATATTGC	NA	NA	NA	NA	NA	NA	NA	NA	84996943	84994897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_84995033_84996887
ENSMUSG00000022432.8_84994959_84996993_1	chr15	-	180	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	19169	44539	19169	-44539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTCAGCTGAAGAAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	84996993	84994958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_84995033_84996887
ENSMUSG00000022432.8_84995003_84997051_1	chr15	-	194	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	19111	44583	19111	-44583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGGCTGTAAGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	84997051	84995002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_84995033_84996887
ENSMUSG00000022432.8_84996959_84998936_1	chr15	-	172	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	17226	46539	17226	-46539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTGTATTCGATTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	84998936	84996958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_84997074_84998879
ENSMUSG00000022432.8_84997007_84998991_1	chr15	-	179	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	17171	46587	17171	-46587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCGGTACATGGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	84998991	84997006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_84997074_84998879
ENSMUSG00000022432.8_85004818_85005822_1	chr15	-	175	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	10340	54398	10340	-54398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAAGGATTCTATAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	85005822	85004817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_85004960_85005789
ENSMUSG00000022432.8_85004866_85005877_1	chr15	-	182	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	10285	54446	10285	-54446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAGACTTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	85005877	85004865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_85004960_85005789
ENSMUSG00000022432.8_85004926_85005931_1	chr15	-	176	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	10231	54506	10231	-54506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGGAAGGTTGGTATAATG	NA	NA	NA	NA	NA	NA	NA	NA	85005931	85004925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_85004960_85005789
ENSMUSG00000022432.8_85005925_85007971_1	chr15	-	174	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	8191	55505	8191	-55505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGCAGGAAGATGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	85007971	85005924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_85006049_85007921
ENSMUSG00000022432.8_85006022_85008078_1	chr15	-	184	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	8084	55602	8084	-55602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCCTCAGTACATTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	85008078	85006021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_85006049_85007921
ENSMUSG00000022432.8_85008038_85011735_1	chr15	-	190	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	4427	57618	4427	-57618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAATTTAAGTGTTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	85011735	85008037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_85008161_85011668
ENSMUSG00000022432.8_85008095_85011789_1	chr15	-	187	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	4373	57675	4373	-57675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATATTATAATGAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	85011789	85008094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_85008161_85011668
ENSMUSG00000022432.8_85008145_85011847_1	chr15	-	195	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	4315	57725	4315	-57725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTCCTTGAAGAATTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	85011847	85008144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_85008161_85011668
ENSMUSG00000022432.8_85011995_85013976_1	chr15	-	183	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	2186	61575	2186	-61575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAGTCAAAGCACAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	85013976	85011994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_85012073_85013871
ENSMUSG00000022432.8_85012048_85014025_1	chr15	-	179	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	2137	61628	2137	-61628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAAACCCGTGAGTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	85014025	85012047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_85012073_85013871
ENSMUSG00000022433.22_79302056_79310644_1	chr15	-	2235	7	ISM	ENSMUSG00000022433.22	ENSMUST00000117786.9	2695	11	15556	0	15374	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCCTCTGTCTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	79310644	79302055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458
ENSMUSG00000022433.22_79302194_79314067_1	chr15	-	2296	8	ISM	ENSMUSG00000022433.22	ENSMUST00000117786.9	2695	11	12133	138	11951	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAACTGAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	79314067	79302193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911
ENSMUSG00000022433.22_79303349_79323059_1	chr15	-	1333	10	ISM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	3144	-17	2959	17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAATAAGAGAAAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	79323059	79303348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971
ENSMUSG00000022433.22_79304784_79326200_1	chr15	-	1303	9	ISM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	3	1418	0	-1418	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCAACTCTTCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	79326200	79304783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
ENSMUSG00000022434.9_84921403_84938057_1	chr15	+	989	6	ISM	ENSMUSG00000022434.9	ENSMUST00000023069.9	2518	9	113	8974	113	-8974	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAGCTCTGCCGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	84921402	84938057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771
ENSMUSG00000022434.9_84929899_84945767_1	chr15	+	964	7	ISM	ENSMUSG00000022434.9	ENSMUST00000229203.2	2605	9	2956	1264	2956	-1264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGAAAACCAGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	84929898	84945767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
ENSMUSG00000022434.9_84930024_84945950_1	chr15	+	1022	7	ISM	ENSMUSG00000022434.9	ENSMUST00000229203.2	2605	9	3081	1081	3081	-1081	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGACACACTTCAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	84930023	84945950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
ENSMUSG00000022434.9_84934957_84946199_1	chr15	+	937	5	ISM	ENSMUSG00000022434.9	ENSMUST00000229203.2	2605	9	8014	832	8014	-832	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGTAGAAAGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	84934956	84946199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
ENSMUSG00000022434.9_84943001_84946657_1	chr15	+	951	2	ISM	ENSMUSG00000022434.9	ENSMUST00000229203.2	2605	9	16058	374	16058	-374	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAGGTTAACTTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	84943000	84946657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_84943027_84945732
ENSMUSG00000022437.8_84080000_84081309_1	chr15	+	160	2	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	3558	20159	3558	-20159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTGTCCTCTGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	84079999	84081309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_84080056_84081205
ENSMUSG00000022437.8_84082829_84084538_1	chr15	+	186	3	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	6387	16930	6387	-16930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTCCAGTTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	84082828	84084538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_84082863_84083973_84084081_84084493
ENSMUSG00000022437.8_84084053_84084877_1	chr15	+	206	3	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	7611	16591	7611	-16591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTCGGGAGACAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	84084052	84084877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_84084081_84084493_84084625_84084830
ENSMUSG00000022437.8_84084566_84086478_1	chr15	+	195	3	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	8124	14990	8124	-14990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGAGCTGGGCTGCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	84084565	84086478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_84084625_84084830_84084919_84086430
ENSMUSG00000022437.8_84095261_84098397_1	chr15	+	190	2	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	18819	3071	18819	-3071	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACAGGCATCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	84095260	84098397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_84095380_84098326
ENSMUSG00000022437.8_84095314_84098445_1	chr15	+	185	2	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	18872	3023	18872	-3023	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTTCTGGGCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	84095313	84098445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_84095380_84098326
ENSMUSG00000022438.7_84193078_84199167_1	chr15	+	2163	3	ISM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	76834	722	76834	-722	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTCTCACACACCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	84193077	84199167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_84193156_84196903_84196977_84197155
ENSMUSG00000022440.10_78408333_78411575_1	chr15	-	1414	2	ISM	ENSMUSG00000022440.10	ENSMUST00000023075.9	2402	3	2250	787	2217	-785	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTCCCATGCTCCACGT	NA	NA	NA	NA	NA	NA	NA	NA	78411575	78408332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_78409599_78411427
ENSMUSG00000022442.17_83368029_83389484_1	chr15	-	1549	9	ISM	ENSMUSG00000022442.17	ENSMUST00000109480.8	1876	12	5598	0	5591	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGATCTACCTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83389484	83368028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450
ENSMUSG00000022442.17_83368029_83389533_1	chr15	-	1598	9	ISM	ENSMUSG00000022442.17	ENSMUST00000109480.8	1876	12	5549	0	5542	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGATCTACCTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83389533	83368028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450
ENSMUSG00000022442.17_83368207_83389732_1	chr15	-	1503	10	ISM	ENSMUSG00000022442.17	ENSMUST00000016897.12	2060	12	5362	237	5343	-178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCACACATGCACACACACA	NA	NA	NA	NA	NA	NA	NA	NA	83389732	83368206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683
ENSMUSG00000022442.17_83368256_83389784_1	chr15	-	1506	10	ISM	ENSMUSG00000022442.17	ENSMUST00000016897.12	2060	12	5310	286	5291	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGCAAGGTGGAGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	83389784	83368255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683
ENSMUSG00000022442.17_83368398_83394994_1	chr15	-	1532	12	FSM	ENSMUSG00000022442.17	ENSMUST00000016897.12	2060	12	100	428	81	-369	multi-exon	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGGAAGTGACCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	83394994	83368397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83394934
ENSMUSG00000022442.17_83368444_83395024_1	chr15	-	1516	12	FSM	ENSMUSG00000022442.17	ENSMUST00000016897.12	2060	12	70	474	51	-415	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGAGCAGGCCGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	83395024	83368443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83394934
ENSMUSG00000022442.17_83368494_83395075_1	chr15	-	1517	12	FSM	ENSMUSG00000022442.17	ENSMUST00000016897.12	2060	12	19	524	0	-465	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGACGGGGCTGAACGAG	NA	NA	NA	NA	NA	NA	NA	NA	83395075	83368493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83394934
ENSMUSG00000022443.18_77645189_77647204_1	chr15	-	1081	2	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	79113	401	50227	-401	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTGGGTGTCTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	77647204	77645188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77646217_77647151
ENSMUSG00000022443.18_77645247_77647266_1	chr15	-	1085	2	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	79051	459	50165	-459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGATGCTTTTGAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	77647266	77645246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77646217_77647151
ENSMUSG00000022443.18_77645354_77647487_1	chr15	-	1102	3	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	78830	566	49944	-566	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGGGCTGGAGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	77647487	77645353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77646217_77647151_77647325_77647421
ENSMUSG00000022443.18_77645473_77648045_1	chr15	-	1080	4	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	78272	685	49386	-685	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGGGCATCAGGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	77648045	77645472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991
ENSMUSG00000022443.18_77645533_77648088_1	chr15	-	1063	4	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	78229	745	49343	-745	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCAATGCCCCTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	77648088	77645532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991
ENSMUSG00000022443.18_77646053_77650995_1	chr15	-	1079	8	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	75322	1265	46436	-1265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCCAACCCTCCACACC	NA	NA	NA	NA	NA	NA	NA	NA	77650995	77646052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913
ENSMUSG00000022443.18_77647457_77651733_1	chr15	-	1083	8	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	74584	2669	45698	-2669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAGCGGAGGAACGCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	77651733	77647456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650
ENSMUSG00000022443.18_77648161_77653084_1	chr15	-	1063	8	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	73233	3373	44347	-3373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGCACAGAAGAATGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	77653084	77648160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991
ENSMUSG00000022443.18_77648743_77653476_1	chr15	-	1093	7	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	72841	3955	43955	-3955	internal_fragment	TRUE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCTGATGAGATCGC	NA	NA	NA	NA	NA	NA	NA	NA	77653476	77648742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400
ENSMUSG00000022443.18_77651017_77654054_1	chr15	-	1080	7	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	72263	6229	43377	-6229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCACGCAAGAAACTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	77654054	77651016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966
ENSMUSG00000022443.18_77651471_77655408_1	chr15	-	1084	7	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	70909	6683	42023	-6683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGATGAGCTGCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	77655408	77651470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324
ENSMUSG00000022443.18_77651754_77656163_1	chr15	-	1109	7	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	70154	6966	41268	-6966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGAGGCCATGGAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	77656163	77651753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023
ENSMUSG00000022443.18_77653056_77657552_1	chr15	-	1089	7	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	68765	8268	39879	-8268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGGACCACCAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	77657552	77653055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471
ENSMUSG00000022443.18_77653488_77658818_1	chr15	-	1094	8	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	67499	8700	38613	-8700	internal_fragment	TRUE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAAACTCCTTCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	77658818	77653487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756
ENSMUSG00000022443.18_77655408_77661126_1	chr15	-	1084	8	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	65191	10620	36305	-10620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGCCCAGATCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	77661126	77655407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090
ENSMUSG00000022443.18_77656121_77662073_1	chr15	-	1104	8	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	64244	11333	35358	-11333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGAGAAGCAGAAACGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	77662073	77656120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967
ENSMUSG00000022443.18_77656166_77662128_1	chr15	-	1114	8	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	64189	11378	35303	-11378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCAGGAGGACCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	77662128	77656165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967
ENSMUSG00000022443.18_77657571_77665396_1	chr15	-	1100	9	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	60921	12783	32035	-12783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTCAGTGACCAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	77665396	77657570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310
ENSMUSG00000022443.18_77658235_77665595_1	chr15	-	1037	9	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	60722	13447	31836	-13447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGAATTCACTACCAA	NA	NA	NA	NA	NA	NA	NA	NA	77665595	77658234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521
ENSMUSG00000022443.18_77659332_77669323_1	chr15	-	1083	9	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	56994	14544	28108	-14544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGAGCGCTGCCAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	77669323	77659331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292
ENSMUSG00000022443.18_77659423_77669454_1	chr15	-	1123	9	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	56863	14635	27977	-14635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGGCTGAGGAGCTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	77669454	77659422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292
ENSMUSG00000022443.18_77660063_77670769_1	chr15	-	1100	9	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	55548	15275	26662	-15275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAGAAACATCTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	77670769	77660062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686
ENSMUSG00000022443.18_77665349_77674135_1	chr15	-	1081	8	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	52182	20561	23296	14811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCAACAGGGTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	77674135	77665348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067
ENSMUSG00000022443.18_77665649_77675298_1	chr15	-	1093	9	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	51019	20861	22133	14511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCGGAAGGGCATGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	77675298	77665648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247
ENSMUSG00000022443.18_77667618_77675959_1	chr15	-	1089	9	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	50358	22830	21472	12542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTTGTCTCTGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	77675959	77667617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915
ENSMUSG00000022443.18_77669400_77680236_1	chr15	-	1085	10	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	46081	24612	17195	10760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCGTGGAGAAGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	77680236	77669399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160
ENSMUSG00000022443.18_77670702_77692120_1	chr15	-	1100	10	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	34197	25914	5311	9458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTGAGAAGCCGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	77692120	77670701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680281_77692067
ENSMUSG00000022443.18_77670765_77692163_1	chr15	-	1080	10	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	34154	25977	5268	9395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGAGAGGGCATCGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	77692163	77670764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680281_77692067
ENSMUSG00000022443.18_77670812_77692224_1	chr15	-	1094	10	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	34093	26024	5207	9348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCTGTTCAACCACACC	NA	NA	NA	NA	NA	NA	NA	NA	77692224	77670811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680281_77692067
ENSMUSG00000022443.18_77671792_77697182_1	chr15	-	1066	10	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	29135	27004	249	8368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAAAGCTCTGGACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	77697182	77671791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680281_77692067_77692225_77697079
ENSMUSG00000022443.18_77671847_77697246_1	chr15	-	1075	10	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	29071	27059	185	8313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTTGGCCAAGGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	77697246	77671846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680281_77692067_77692225_77697079
ENSMUSG00000022443.18_77674068_77697433_1	chr15	-	1127	8	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	28884	29280	-2	6092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACACCAGGCTCTCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	77697433	77674067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680281_77692067_77692225_77697079
ENSMUSG00000022443.18_77674941_77726247_1	chr15	-	1083	8	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	70	30153	70	5219	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAATTATGGGCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	77726247	77674940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680281_77692067_77692225_77697079_77697432_77726156
ENSMUSG00000022443.18_77680160_77692224_1	chr15	-	278	2	ISM	ENSMUSG00000022443.18	ENST00000401701.1	630	3	5207	0	5207	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGCTGGCGCCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	77692224	77680159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_77680281_77692067
ENSMUSG00000022449.15_94171104_94179819_1	chr15	-	237	3	ISM	ENSMUSG00000022449.15	ENST00000389420.8	5808	38	122343	0	122320	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGGTCCCAAGTAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	94179819	94171103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_94171196_94177875_94177968_94179766
ENSMUSG00000022449.15_94253161_94259758_1	chr15	-	272	3	ISM	ENSMUSG00000022449.15	ENSMUST00000155907.2	6886	28	42381	34946	42381	-34946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACCTATCCCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	94259758	94253160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_94253267_94258454_94258496_94259633
ENSMUSG00000022449.15_94277795_94301128_1	chr15	-	272	3	ISM	ENSMUSG00000022449.15	ENSMUST00000155907.2	6886	28	1011	59580	1011	-59580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGAGATGTTGATATCGA	NA	NA	NA	NA	NA	NA	NA	NA	94301128	94277794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_94277845_94292492_94292656_94301069
ENSMUSG00000022450.7_82234341_82238523_1	chr15	-	584	3	NNC	ENSMUSG00000022450.7	novel	590	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTCTCTCTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	82238523	82234340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_82234567_82235179_82235296_82238281
ENSMUSG00000022451.13_94476643_94479267_1	chr15	-	1521	3	ISM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	8493	811	8493	-811	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTAGAACACTTGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	94479267	94476642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_94477872_94478824_94478947_94479097
ENSMUSG00000022451.13_94476801_94480756_1	chr15	-	1470	4	ISM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	7004	969	7004	-969	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTACTACTTAGTAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	94480756	94476800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630
ENSMUSG00000022451.13_94476801_94482372_1	chr15	-	1581	5	ISM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	5388	969	5388	-969	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTACTACTTAGTAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	94482372	94476800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261
ENSMUSG00000022451.13_94477091_94484318_1	chr15	-	1461	7	ISM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	3442	1259	3442	-1259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCTGCACTGGAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	94484318	94477090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238
ENSMUSG00000022451.13_94477128_94484357_1	chr15	-	1463	7	ISM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	3403	1296	3403	-1296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACCAGACAGTGCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	94484357	94477127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238
ENSMUSG00000022451.13_94477292_94487656_1	chr15	-	1461	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	104	1460	104	-1460	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGGAGCCTGGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	94487656	94477291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ENSMUSG00000022451.13_94477345_94487760_1	chr15	-	1512	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	0	1513	0	-1513	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGGGAAGCGAACGACG	NA	NA	NA	NA	NA	NA	NA	NA	94487760	94477344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ENSMUSG00000022451.13_94477400_94487760_1	chr15	-	1457	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	0	1568	0	-1568	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAAGCATAAGGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	94487760	94477399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ENSMUSG00000022452.17_82230155_82233208_1	chr15	+	622	3	FSM	ENSMUSG00000022452.17	ENSMUST00000023086.15	705	3	0	83	0	-52	multi-exon	FALSE	canonical	NA	NA	NA	NA	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGGAAATAACAAGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	82230154	82233208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_82230471_82232100_82232242_82233043
ENSMUSG00000022452.17_82230278_82233292_1	chr15	+	583	3	FSM	ENSMUSG00000022452.17	ENSMUST00000023086.15	705	3	123	-1	123	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCTTGGTTGCACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	82230277	82233292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_82230471_82232100_82232242_82233043
ENSMUSG00000022452.17_82230278_82233292_2	chr15	+	576	3	NNC	ENSMUSG00000022452.17	novel	705	3	NA	NA	123	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCTTGGTTGCACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	82230277	82233292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_82230471_82232100_82232242_82233050
ENSMUSG00000022453.9_82214306_82214913_1	chr15	-	161	2	ISM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	8114	573	8070	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCAAAGACCTGGGGATA	NA	NA	NA	NA	NA	NA	NA	NA	82214913	82214305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_82214409_82214855
ENSMUSG00000022454.18_95117457_95127025_1	chr15	-	640	2	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	298551	126	298551	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAAAAGTCACCCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	95127025	95117456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95118036_95126964
ENSMUSG00000022454.18_95117512_95127074_1	chr15	-	634	2	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	298502	181	298502	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCTATTGTCATGATAA	NA	NA	NA	NA	NA	NA	NA	NA	95127074	95117511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95118036_95126964
ENSMUSG00000022454.18_95117580_95127162_1	chr15	-	654	2	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	298414	249	298414	234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGCGAGTTATATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	95127162	95117579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95118036_95126964
ENSMUSG00000022454.18_95117814_95130459_1	chr15	-	719	4	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	295117	483	295117	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGCGAGATGACCATT	NA	NA	NA	NA	NA	NA	NA	NA	95130459	95117813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95118036_95126964_95127190_95129177_95129355_95130364
ENSMUSG00000022454.18_95117941_95130520_1	chr15	-	653	4	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	295056	610	295056	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTTCAAAAGACCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	95130520	95117940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95118036_95126964_95127190_95129177_95129355_95130364
ENSMUSG00000022454.18_95118019_95130558_1	chr15	-	613	4	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	295018	688	295018	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGATCCACAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	95130558	95118018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95118036_95126964_95127190_95129177_95129355_95130364
ENSMUSG00000022454.18_95127117_95194126_1	chr15	-	672	5	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	231450	9786	231450	-9303	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGCCCACGCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	95194126	95127116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95127190_95129177_95129355_95130364_95130559_95139417_95139559_95194039
ENSMUSG00000022454.18_95130412_95272636_1	chr15	-	661	6	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	152940	13081	152940	-12598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTGGGTGCTGGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	95272636	95130411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95130559_95139417_95139559_95194039_95194136_95196738_95196862_95244642_95244769_95272608
ENSMUSG00000022454.18_95130483_95272696_1	chr15	-	650	6	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	152880	13152	152880	-12669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCGGTGTCCCCATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	95272696	95130482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95130559_95139417_95139559_95194039_95194136_95196738_95196862_95244642_95244769_95272608
ENSMUSG00000022454.18_95139456_95281564_1	chr15	-	635	6	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	144012	22125	144012	-21642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGGATGTTTGCGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	95281564	95139455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95139559_95194039_95194136_95196738_95196862_95244642_95244769_95272608_95272738_95281506
ENSMUSG00000022454.18_95194108_95327809_1	chr15	-	652	7	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	97767	76777	97767	-76294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCGTGCATTGCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	95327809	95194107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95194136_95196738_95196862_95244642_95244769_95272608_95272738_95281506_95281610_95282945_95283038_95327758
ENSMUSG00000022454.18_95244729_95330527_1	chr15	-	648	7	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	95049	127398	95049	-126915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACCATGTGTGTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	95330527	95244728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95244769_95272608_95272738_95281506_95281610_95282945_95283038_95327758_95327862_95329419_95329549_95330475
ENSMUSG00000022454.18_95272672_95332998_1	chr15	-	705	8	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	92578	155341	92578	-154858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGTGTGCAGCTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	95332998	95272671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95272738_95281506_95281610_95282945_95283038_95327758_95327862_95329419_95329549_95330475_95330559_95330731_95330805_95332942
ENSMUSG00000022454.18_95282968_95333218_1	chr15	-	636	7	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	92358	165637	92358	-165154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTCTTATATGAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	95333218	95282967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95283038_95327758_95327862_95329419_95329549_95330475_95330559_95330731_95330805_95332942_95333040_95333137
ENSMUSG00000022454.18_95327820_95371434_1	chr15	-	643	7	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	54142	210489	54142	-210006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCCCTCCTAAATCGGC	NA	NA	NA	NA	NA	NA	NA	NA	95371434	95327819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95327862_95329419_95329549_95330475_95330559_95330731_95330805_95332942_95333040_95333137_95333312_95371389
ENSMUSG00000022454.18_95329420_95371540_1	chr15	-	707	6	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	54036	212089	54036	-211606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGCCTTCCGTTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	95371540	95329419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95329549_95330475_95330559_95330731_95330805_95332942_95333040_95333137_95333312_95371389
ENSMUSG00000022454.18_95330495_95425239_1	chr15	-	641	6	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	337	213164	337	-212681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGACGTCAGCCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	95425239	95330494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95330559_95330731_95330805_95332942_95333040_95333137_95333312_95371389_95371541_95425157
ENSMUSG00000022454.18_95330783_95425502_1	chr15	-	639	6	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	74	213452	74	-212969	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTCATGCCTCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	95425502	95330782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_95330805_95332942_95333040_95333137_95333312_95371389_95371541_95425157_95425287_95425436
ENSMUSG00000022456.19_82159440_82178775_1	chr15	+	2571	11	NNC	ENSMUSG00000022456.19	novel	2586	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGTCTTTGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	82159439	82178775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168579_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82177446
ENSMUSG00000022456.19_82159440_82178775_2	chr15	+	2573	11	NNC	ENSMUSG00000022456.19	novel	2586	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1928	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGTCTTTGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	82159439	82178775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_82159688_82163615_82163808_82167264_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82177446
ENSMUSG00000022456.19_82159440_82178775_3	chr15	+	2574	11	NNC	ENSMUSG00000022456.19	novel	2586	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGTCTTTGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	82159439	82178775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82177450
ENSMUSG00000022456.19_82159440_82178775_4	chr15	+	2571	11	NNC	ENSMUSG00000022456.19	novel	2586	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGTCTTTGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	82159439	82178775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_82159688_82163615_82163801_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82177446
ENSMUSG00000022456.19_82159440_82178775_5	chr15	+	2578	11	FSM	ENSMUSG00000022456.19	ENST00000396426.7	2586	11	8	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGTCTTTGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	82159439	82178775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82177446
ENSMUSG00000022456.19_82159440_82178775_6	chr15	+	2572	11	NNC	ENSMUSG00000022456.19	novel	2586	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGTCTTTGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	82159439	82178775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_82159688_82163615_82163808_82167259_82167389_82167883_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82177446
ENSMUSG00000022456.19_82159477_82178274_1	chr15	+	1845	10	NNC	ENSMUSG00000022456.19	novel	1859	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATACATTTAGCAATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	82159476	82178274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_82159688_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173398_82173496_82174604_82174657_82174938_82175033_82177446
ENSMUSG00000022456.19_82159477_82178274_2	chr15	+	1844	10	NNC	ENSMUSG00000022456.19	novel	1859	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATACATTTAGCAATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	82159476	82178274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_82159688_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82177450
ENSMUSG00000022456.19_82159477_82178274_3	chr15	+	1848	10	FSM	ENSMUSG00000022456.19	ENST00000406029.5	1859	10	11	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATACATTTAGCAATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	82159476	82178274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_82159688_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82177446
ENSMUSG00000022456.19_82159477_82178274_4	chr15	+	1843	10	NNC	ENSMUSG00000022456.19	novel	1859	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATACATTTAGCAATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	82159476	82178274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_82159688_82167264_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82177446
ENSMUSG00000022456.19_82159477_82178274_5	chr15	+	1842	10	NNC	ENSMUSG00000022456.19	novel	1859	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATACATTTAGCAATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	82159476	82178274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_82159688_82167259_82167389_82167883_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82177446
ENSMUSG00000022462.8_96585782_96589259_1	chr15	-	2508	3	ISM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	8352	509	8352	-509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGATAAACTGTACATA	NA	NA	NA	NA	NA	NA	NA	NA	96589259	96585781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96588110_96588989_96589088_96589177
ENSMUSG00000022462.8_96585946_96589588_1	chr15	-	2436	4	ISM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	8023	673	8023	-673	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGGTTCCTGAACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	96589588	96585945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559
ENSMUSG00000022462.8_96586257_96590953_1	chr15	-	2458	7	ISM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	6658	984	6658	-984	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAACCCCTGGGGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	96590953	96586256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897
ENSMUSG00000022462.8_96586414_96591479_1	chr15	-	2506	9	ISM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	6132	1141	6132	-1141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTGACACACATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	96591479	96586413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436
ENSMUSG00000022462.8_96586791_96595835_1	chr15	-	2451	13	ISM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	1776	1518	1776	-1518	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAACTGGATCATCATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	96595835	96586790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802
ENSMUSG00000022462.8_96587057_96596585_1	chr15	-	2440	15	ISM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	1026	1784	1026	-1784	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGTCAGCTCTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	96596585	96587056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495
ENSMUSG00000022462.8_96587127_96596647_1	chr15	-	2432	15	ISM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	964	1854	964	-1854	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTGAGGTACCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	96596647	96587126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495
ENSMUSG00000022462.8_96587297_96597414_1	chr15	-	2439	16	FSM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	197	2024	197	-2024	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCATTCAGATTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	96597414	96587296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
ENSMUSG00000022462.8_96587404_96597611_1	chr15	-	2529	16	FSM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	0	2131	0	-2131	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCCTTTTTTGTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	96597611	96587403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
ENSMUSG00000022463.9_82055408_82061425_1	chr15	+	515	4	ISM	ENSMUSG00000022463.9	ENSMUST00000229336.2	4040	21	24003	27451	24003	-27451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCGCCAGGAGAACATGGT	NA	NA	NA	NA	NA	NA	NA	NA	82055407	82061425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_82055485_82056953_82057101_82059297_82059520_82061356
ENSMUSG00000022463.9_82055463_82061471_1	chr15	+	506	4	ISM	ENSMUSG00000022463.9	ENSMUST00000229336.2	4040	21	24058	27405	24058	-27405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTGCCTGCCGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	82055462	82061471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_82055485_82056953_82057101_82059297_82059520_82061356
ENSMUSG00000022463.9_82057001_82061698_1	chr15	+	529	4	ISM	ENSMUSG00000022463.9	ENSMUST00000229336.2	4040	21	25596	27178	25596	-27178	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCGGCCTCCGACTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	82057000	82061698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_82057101_82059297_82059520_82061356_82061472_82061606
ENSMUSG00000022463.9_82059401_82063065_1	chr15	+	564	4	ISM	ENSMUSG00000022463.9	ENSMUST00000229336.2	4040	21	27996	25811	27996	-25811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATACTCAGGCTCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	82059400	82063065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_82059520_82061356_82061472_82061606_82061789_82062917
ENSMUSG00000022463.9_82062955_82066364_1	chr15	+	521	3	ISM	ENSMUSG00000022463.9	ENSMUST00000229336.2	4040	21	31550	22512	31550	-22512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCCACTGCAGCTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	82062954	82066364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_82063111_82063566_82063749_82066181
ENSMUSG00000022463.9_82063655_82069618_1	chr15	+	525	3	ISM	ENSMUSG00000022463.9	ENSMUST00000229336.2	4040	21	32250	19258	32250	-19258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCTTCTTGGCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	82063654	82069618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_82063749_82066181_82066459_82069464
ENSMUSG00000022463.9_82066353_82078321_1	chr15	+	521	4	ISM	ENSMUSG00000022463.9	ENSMUST00000229336.2	4040	21	34948	10555	34948	-10555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGCCAAGAAGAAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	82066352	82078321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_82066459_82069464_82069635_82076406_82076576_82078245
ENSMUSG00000022463.9_82069562_82080420_1	chr15	+	530	5	ISM	ENSMUSG00000022463.9	ENSMUST00000229336.2	4040	21	38157	8456	38157	-8456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGACGATGCAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	82069561	82080420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360
ENSMUSG00000022463.9_82083987_82088249_1	chr15	+	499	3	ISM	ENSMUSG00000022463.9	ENSMUST00000229336.2	4040	21	52582	627	52582	-627	intron_retention	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTGTTCTGAGCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	82083986	82088249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_82084022_82087385_82087498_82087897
ENSMUSG00000022463.9_82087433_82088379_1	chr15	+	547	2	ISM	ENSMUSG00000022463.9	ENSMUST00000229336.2	4040	21	56028	497	56028	-497	intron_retention	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGAGCAGGAACGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	82087432	82088379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_82087498_82087897
ENSMUSG00000022466.7_97572978_97603706_1	chr15	-	2270	17	NNC	ENSMUSG00000022466.7	novel	2271	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGTCGATATTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	97603706	97572977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596915_97598944_97599093_97601082_97601251_97603630
ENSMUSG00000022466.7_97572978_97603706_2	chr15	-	2265	17	NNC	ENSMUSG00000022466.7	novel	2271	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGTCGATATTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	97603706	97572977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_97573261_97576266_97576368_97576950_97577049_97578221_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ENSMUSG00000022466.7_97572978_97603706_3	chr15	-	2264	17	NNC	ENSMUSG00000022466.7	novel	2271	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGTCGATATTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	97603706	97572977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578396_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ENSMUSG00000022466.7_97572978_97603706_4	chr15	-	2263	17	NNC	ENSMUSG00000022466.7	novel	2271	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGTCGATATTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	97603706	97572977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584437_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ENSMUSG00000022468.13_97609900_97629235_1	chr15	-	1159	8	NNC	ENSMUSG00000022468.13	novel	1196	8	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGACAAGCAGGGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	97629235	97609899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_97610051_97610838_97610982_97611661_97611769_97612376_97612491_97616641_97616842_97617394_97617567_97618009_97618142_97629095
ENSMUSG00000022468.13_97609900_97629235_2	chr15	-	1162	8	NNC	ENSMUSG00000022468.13	novel	1196	8	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGACAAGCAGGGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	97629235	97609899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_97610051_97610838_97610982_97611661_97611763_97612376_97612491_97616641_97616842_97617394_97617567_97618000_97618142_97629095
ENSMUSG00000022468.13_97609900_97629235_3	chr15	-	1168	8	FSM	ENSMUSG00000022468.13	ENST00000545824.2	1196	8	29	-1	-15	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGACAAGCAGGGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	97629235	97609899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_97610051_97610838_97610982_97611661_97611769_97612376_97612491_97616641_97616842_97617394_97617567_97618000_97618142_97629095
ENSMUSG00000022468.13_97609900_97629235_4	chr15	-	1167	8	NNC	ENSMUSG00000022468.13	novel	1196	8	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGACAAGCAGGGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	97629235	97609899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_97610051_97610838_97610982_97611661_97611769_97612376_97612491_97616641_97616842_97617394_97617567_97618000_97618142_97629096
ENSMUSG00000022471.15_81903259_81913386_1	chr15	+	827	6	ISM	ENSMUSG00000022471.15	ENST00000420392.1	1680	11	78	10699	78	-10699	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGTTTGATCCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	81903258	81913386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81903295_81906683_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322
ENSMUSG00000022471.15_81906748_81913491_1	chr15	+	832	5	ISM	ENSMUSG00000022471.15	ENST00000420392.1	1680	11	3567	10594	3567	-10594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	740	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCCGAGACTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	81906747	81913491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322
ENSMUSG00000022471.15_81907004_81913793_1	chr15	+	829	5	ISM	ENSMUSG00000022471.15	ENST00000420392.1	1680	11	3823	10292	3823	-10292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGTGTGTGGAGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	81907003	81913793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763
ENSMUSG00000022471.15_81907177_81915385_1	chr15	+	840	6	ISM	ENSMUSG00000022471.15	ENST00000420392.1	1680	11	3996	8700	3996	-8700	internal_fragment	TRUE	canonical	NA	NA	NA	NA	731	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGAGAAGGTGACGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	81907176	81915385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333
ENSMUSG00000022471.15_81909806_81919936_1	chr15	+	791	6	ISM	ENSMUSG00000022471.15	ENST00000420392.1	1680	11	6625	4149	-2527	-4149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACATGATGGAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	81909805	81919936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877
ENSMUSG00000022471.15_81909855_81921692_1	chr15	+	819	7	ISM	ENSMUSG00000022471.15	ENST00000420392.1	1680	11	6674	2393	-2478	-2393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGGCAGATGAGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	81909854	81921692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657
ENSMUSG00000022471.15_81911465_81924003_1	chr15	+	905	7	ISM	ENSMUSG00000022471.15	ENST00000420392.1	1680	11	8284	82	-868	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTAAGCTCACTGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	81911464	81924003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ENSMUSG00000022471.15_81911546_81924003_1	chr15	+	824	7	ISM	ENSMUSG00000022471.15	ENST00000420392.1	1680	11	8365	82	-787	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTAAGCTCACTGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	81911545	81924003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ENSMUSG00000022471.15_81911596_81924022_1	chr15	+	793	7	ISM	ENSMUSG00000022471.15	ENST00000420392.1	1680	11	8415	63	-737	-63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTGAAGGACATATGCA	NA	NA	NA	NA	NA	NA	NA	NA	81911595	81924022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ENSMUSG00000022472.17_81877874_81882347_1	chr15	-	1210	2	ISM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	18017	1150	18017	-1150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGAGGGACCTTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	81882347	81877873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81879047_81882310
ENSMUSG00000022472.17_81878048_81886792_1	chr15	-	1283	4	ISM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	13572	1324	13572	-1324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTGGAGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	81886792	81878047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741
ENSMUSG00000022472.17_81878274_81900212_1	chr15	-	1232	6	FSM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	152	1550	152	-1550	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTCTTCCTCAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	81900212	81878273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886812_81887958_81887981_81900078
ENSMUSG00000022472.17_81878318_81900238_1	chr15	-	1214	6	FSM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	126	1594	126	-1594	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTCCTCCTATCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	81900238	81878317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886812_81887958_81887981_81900078
ENSMUSG00000022472.17_81878389_81900276_1	chr15	-	1181	6	FSM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	88	1665	88	-1665	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGCAGCGTCAGGATCAA	NA	NA	NA	NA	NA	NA	NA	NA	81900276	81878388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886812_81887958_81887981_81900078
ENSMUSG00000022474.16_81835309_81845131_1	chr15	-	1294	8	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	81845131	81835308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_81835814_81836124_81836241_81836925_81836996_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ENSMUSG00000022474.16_81835309_81845131_2	chr15	-	1291	8	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	81845131	81835308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840453_81840562_81840640_81841993_81842112_81844915
ENSMUSG00000022474.16_81835309_81845131_3	chr15	-	1295	8	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	81845131	81835308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_81835814_81836129_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ENSMUSG00000022476.9_81799230_81810441_1	chr15	-	2535	6	NNC	ENSMUSG00000022476.9	novel	2542	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCTGTCATCAAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	81810441	81799229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_81800867_81801400_81801603_81802468_81802533_81802882_81802963_81806609_81806707_81809986
ENSMUSG00000022476.9_81799230_81810441_2	chr15	-	2534	6	NNC	ENSMUSG00000022476.9	novel	2542	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCTGTCATCAAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	81810441	81799229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_81800867_81801400_81801595_81802468_81802533_81802875_81802963_81806609_81806707_81809986
ENSMUSG00000022477.14_81756510_81788207_1	chr15	+	1039	6	ISM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	0	11127	0	-11105	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGATGGCAGCCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	81756509	81788207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056
ENSMUSG00000022477.14_81756685_81789068_1	chr15	+	988	7	ISM	ENSMUSG00000022477.14	ENST00000677532.1	2768	18	-19	10291	0	-10244	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTCCTAGGGCAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	81756684	81789068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81756750_81756912_81757069_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963
ENSMUSG00000022477.14_81756685_81790144_1	chr15	+	1061	8	ISM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	175	9190	0	-9168	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCGGAGAAGTAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	81756684	81790144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052
ENSMUSG00000022477.14_81756685_81799139_1	chr15	+	2533	18	FSM	ENSMUSG00000022477.14	ENST00000678788.1	2753	18	0	220	0	-173	multi-exon	FALSE	canonical	NA	NA	NA	NA	7076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGATAATGTTCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	81756684	81799139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790067_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUSG00000022477.14_81756685_81799334_1	chr15	+	2812	18	FSM	ENSMUSG00000022477.14	ENST00000396512.3	2778	18	-12	-22	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGCCTGAGTGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	81756684	81799334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788277_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUSG00000022477.14_81756685_81799334_2	chr15	+	2807	18	NNC	ENSMUSG00000022477.14	novel	2778	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGCCTGAGTGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	81756684	81799334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788277_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794618_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUSG00000022477.14_81756891_81790144_1	chr15	+	1037	7	ISM	ENSMUSG00000022477.14	ENST00000677532.1	2768	18	187	9215	187	-9168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCGGAGAAGTAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	81756890	81790144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81757069_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052
ENSMUSG00000022477.14_81756999_81791667_1	chr15	+	970	8	ISM	ENSMUSG00000022477.14	ENST00000677532.1	2768	18	295	7692	295	-7645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCAGTGGCAGATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	81756998	81791667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81757069_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626
ENSMUSG00000022477.14_81773507_81799216_1	chr15	+	2534	17	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	16803	-96	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGACAGCACTCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	81773506	81799216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790070_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUSG00000022477.14_81779370_81799334_1	chr15	+	2527	16	ISM	ENSMUSG00000022477.14	ENST00000678788.1	2753	18	22685	25	22666	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGCCTGAGTGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	81779369	81799334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790067_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUSG00000022477.14_81779507_81794710_1	chr15	+	1158	10	ISM	ENSMUSG00000022477.14	ENST00000677532.1	2768	18	22803	4649	22803	-4602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACATCCCCAGAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	81779506	81794710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613
ENSMUSG00000022477.14_81779507_81799334_1	chr15	+	2390	16	ISM	ENSMUSG00000022477.14	ENST00000678788.1	2753	18	22822	25	22803	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGCCTGAGTGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	81779506	81799334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790067_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUSG00000022477.14_81787774_81796440_1	chr15	+	1017	10	ISM	ENSMUSG00000022477.14	ENST00000677532.1	2768	18	31070	2919	31070	-2872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGGACAGCAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	81787773	81796440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406
ENSMUSG00000022477.14_81788055_81796562_1	chr15	+	1079	9	ISM	ENSMUSG00000022477.14	ENST00000677532.1	2768	18	31351	2797	31351	-2750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCGCAGGCATCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	81788054	81796562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406
ENSMUSG00000022477.14_81788156_81797345_1	chr15	+	1017	10	ISM	ENSMUSG00000022477.14	ENST00000677532.1	2768	18	31452	2014	31452	-1967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCTGGCTCAAGTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	81788155	81797345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306
ENSMUSG00000022479.16_97752653_97756739_1	chr15	-	2930	2	ISM	ENSMUSG00000022479.16	ENSMUST00000023119.15	4370	10	49452	347	49452	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCCGAGGCGGAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	97756739	97752652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97755513_97756669
ENSMUSG00000022479.16_97752820_97757088_1	chr15	-	2920	3	ISM	ENSMUSG00000022479.16	ENSMUST00000023119.15	4370	10	49103	514	49103	-514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTCAGCCCAAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	97757088	97752819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97755513_97756669_97756787_97756978
ENSMUSG00000022479.16_97752924_97765061_1	chr15	-	2922	4	ISM	ENSMUSG00000022479.16	ENSMUST00000023119.15	4370	10	41130	618	41130	-618	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGACTCTCTGCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	97765061	97752923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97755513_97756669_97756787_97756978_97757131_97764997
ENSMUSG00000022479.16_97752993_97765126_1	chr15	-	2918	4	ISM	ENSMUSG00000022479.16	ENSMUST00000023119.15	4370	10	41065	687	41065	-687	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGGGTAATAAACTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	97765126	97752992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97755513_97756669_97756787_97756978_97757131_97764997
ENSMUSG00000022479.16_97753101_97767266_1	chr15	-	2921	5	ISM	ENSMUSG00000022479.16	ENSMUST00000023119.15	4370	10	38925	795	38925	-795	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCTGCTTTGTAGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	97767266	97753100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97755513_97756669_97756787_97756978_97757131_97764997_97765170_97767198
ENSMUSG00000022479.16_97753400_97774735_1	chr15	-	2976	7	ISM	ENSMUSG00000022479.16	ENSMUST00000023119.15	4370	10	31456	1094	31456	-1094	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCACCTGATTCAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	97774735	97753399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97755513_97756669_97756787_97756978_97757131_97764997_97765170_97767198_97767305_97767526_97767712_97774604
ENSMUSG00000022479.16_97753694_97806191_1	chr15	-	2982	10	FSM	ENSMUSG00000022479.16	ENSMUST00000023119.15	4370	10	0	1388	0	-1388	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACCTAGGGAATGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	97806191	97753693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_97755513_97756669_97756787_97756978_97757131_97764997_97765170_97767198_97767305_97767526_97767712_97774604_97774736_97782674_97782823_97786293_97786370_97806115
ENSMUSG00000022483.18_97873934_97875626_1	chr15	-	590	4	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	26929	13	26912	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCTTGTAAAACCCCC	NA	NA	NA	NA	NA	NA	NA	NA	97875626	97873933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97874068_97874522_97874766_97875062_97875251_97875601
ENSMUSG00000022483.18_97874016_97875655_1	chr15	-	537	4	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	26900	95	26883	-95	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCGCCTTCCCATTATT	NA	NA	NA	NA	NA	NA	NA	NA	97875655	97874015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97874068_97874522_97874766_97875062_97875251_97875601
ENSMUSG00000022483.18_97874600_97875849_1	chr15	-	602	3	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	26706	679	26689	-679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCTCCAATGATGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	97875849	97874599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97874766_97875062_97875251_97875601
ENSMUSG00000022483.18_97874739_97876269_1	chr15	-	555	4	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	26286	818	26269	-818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAACACCGCTAACGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	97876269	97874738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97874766_97875062_97875251_97875601_97875891_97876218
ENSMUSG00000022483.18_97875208_97877136_1	chr15	-	585	5	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	25419	1287	25402	-1287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAAAGTTTTCTGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	97877136	97875207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97875251_97875601_97875891_97876218_97876327_97876758_97876813_97877045
ENSMUSG00000022483.18_97875682_97877538_1	chr15	-	559	6	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	25017	1761	25000	-1761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCAGCCCCGACGGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	97877538	97875681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97875891_97876218_97876327_97876758_97876813_97877045_97877154_97877265_97877320_97877512
ENSMUSG00000022483.18_97875859_97878073_1	chr15	-	565	8	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	24482	1938	24465	-1938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGTCCTCCTGGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	97878073	97875858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97875891_97876218_97876327_97876758_97876813_97877045_97877154_97877265_97877320_97877512_97877621_97877755_97877810_97878026
ENSMUSG00000022483.18_97876218_97878134_1	chr15	-	595	7	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	24421	2297	24404	-2297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTCCTGACCCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	97878134	97876217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97876327_97876758_97876813_97877045_97877154_97877265_97877320_97877512_97877621_97877755_97877810_97878026
ENSMUSG00000022483.18_97876760_97878404_1	chr15	-	561	7	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	24151	2839	24134	-2839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGTGTGATGGTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	97878404	97876759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97876813_97877045_97877154_97877265_97877320_97877512_97877621_97877755_97877810_97878026_97878135_97878328
ENSMUSG00000022483.18_97877108_97878663_1	chr15	-	536	7	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	23892	3187	23875	-3187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGAGGGGACTGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	97878663	97877107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97877154_97877265_97877320_97877512_97877621_97877755_97877810_97878026_97878135_97878328_97878437_97878605
ENSMUSG00000022483.18_97877265_97878767_1	chr15	-	595	6	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	23788	3344	23771	-3344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTATTGGAAAATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	97878767	97877264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97877320_97877512_97877621_97877755_97877810_97878026_97878135_97878328_97878437_97878605
ENSMUSG00000022483.18_97877570_97879449_1	chr15	-	537	6	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	23106	3649	23089	-3649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTCTCCTGGTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	97879449	97877569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97877621_97877755_97877810_97878026_97878135_97878328_97878437_97878605_97878768_97879395
ENSMUSG00000022483.18_97877781_97880445_1	chr15	-	551	7	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	22110	3860	22093	-3860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATGGTGCAGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	97880445	97877780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97877810_97878026_97878135_97878328_97878437_97878605_97878768_97879395_97879450_97879884_97879939_97880409
ENSMUSG00000022483.18_97878095_97880817_1	chr15	-	547	7	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	21738	4174	21721	-4174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGGTCCTCCTGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	97880817	97878094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97878135_97878328_97878437_97878605_97878768_97879395_97879450_97879884_97879939_97880409_97880518_97880796
ENSMUSG00000022483.18_97878363_97881172_1	chr15	-	560	7	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	21383	4442	21366	-4442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGAGGATTCCCCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	97881172	97878362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97878437_97878605_97878768_97879395_97879450_97879884_97879939_97880409_97880518_97880796_97880851_97881118
ENSMUSG00000022483.18_97878605_97881895_1	chr15	-	595	8	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	20660	4684	20643	-4684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTCCCCTGCTAGGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	97881895	97878604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97878768_97879395_97879450_97879884_97879939_97880409_97880518_97880796_97880851_97881118_97881173_97881532_97881587_97881841
ENSMUSG00000022483.18_97878728_97882305_1	chr15	-	535	9	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	20250	4807	20233	-4807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGGTCCCAAAGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	97882305	97878727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97878768_97879395_97879450_97879884_97879939_97880409_97880518_97880796_97880851_97881118_97881173_97881532_97881587_97881841_97881896_97882242
ENSMUSG00000022483.18_97880500_97883216_1	chr15	-	540	9	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	19339	6579	19322	-6579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCCAAGGGTGATCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	97883216	97880499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97880518_97880796_97880851_97881118_97881173_97881532_97881587_97881841_97881896_97882242_97882351_97882600_97882700_97882884_97882930_97883162
ENSMUSG00000022483.18_97881118_97883797_1	chr15	-	577	9	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	18758	7197	18741	-7197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTGTCTCTCTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	97883797	97881117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97881173_97881532_97881587_97881841_97881896_97882242_97882351_97882600_97882700_97882884_97882930_97883162_97883217_97883443_97883498_97883743
ENSMUSG00000022483.18_97881532_97884242_1	chr15	-	577	9	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	18313	7611	18296	-7611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCAGCTGGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	97884242	97881531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97881587_97881841_97881896_97882242_97882351_97882600_97882700_97882884_97882930_97883162_97883217_97883443_97883498_97883743_97883798_97884188
ENSMUSG00000022483.18_97882600_97885464_1	chr15	-	613	9	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	17091	8679	17074	-8679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGAGGCCAAGTCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	97885464	97882599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97882700_97882884_97882930_97883162_97883217_97883443_97883498_97883743_97883798_97884188_97884243_97884622_97884722_97885173_97885228_97885365
ENSMUSG00000022483.18_97882884_97885602_1	chr15	-	568	9	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	16953	8963	16936	-8963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCCTGCTACCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	97885602	97882883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97882930_97883162_97883217_97883443_97883498_97883743_97883798_97884188_97884243_97884622_97884722_97885173_97885228_97885365_97885465_97885548
ENSMUSG00000022483.18_97883743_97886497_1	chr15	-	577	8	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	16058	9822	16041	-9822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTACCTGCTGCTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	97886497	97883742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97883798_97884188_97884243_97884622_97884722_97885173_97885228_97885365_97885465_97885548_97885603_97885964_97886073_97886443
ENSMUSG00000022483.18_97885173_97887265_1	chr15	-	613	8	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	15290	11252	15273	-11252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTATTAGCCTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	97887265	97885172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97885228_97885365_97885465_97885548_97885603_97885964_97886073_97886443_97886498_97886642_97886742_97886828_97886874_97887166
ENSMUSG00000022483.18_97885447_97888847_1	chr15	-	531	8	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	13708	11526	13691	-11526	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCAGTGGCTTGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	97888847	97885446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97885465_97885548_97885603_97885964_97886073_97886443_97886498_97886642_97886742_97886828_97886874_97887166_97887266_97888793
ENSMUSG00000022483.18_97885556_97889269_1	chr15	-	551	8	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	13286	11635	13269	-11635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAGGTGAGTGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	97889269	97885555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97885603_97885964_97886073_97886443_97886498_97886642_97886742_97886828_97886874_97887166_97887266_97888793_97888848_97889224
ENSMUSG00000022483.18_97885992_97892469_1	chr15	-	576	9	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	10086	12071	10069	-12071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCAATCGGACCCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	97892469	97885991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97886073_97886443_97886498_97886642_97886742_97886828_97886874_97887166_97887266_97888793_97888848_97889224_97889270_97891897_97891952_97892424
ENSMUSG00000022483.18_97886466_97892802_1	chr15	-	527	9	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	9753	12545	9736	-12545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGCCCCAAGGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	97892802	97886465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97886498_97886642_97886742_97886828_97886874_97887166_97887266_97888793_97888848_97889224_97889270_97891897_97891952_97892424_97892470_97892748
ENSMUSG00000022483.18_97886642_97893294_1	chr15	-	604	10	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	9261	12721	9244	-12721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAGCCCAAAAAGATTGG	NA	NA	NA	NA	NA	NA	NA	NA	97893294	97886641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97886742_97886828_97886874_97887166_97887266_97888793_97888848_97889224_97889270_97891897_97891952_97892424_97892470_97892748_97892803_97892896_97892951_97893240
ENSMUSG00000022483.18_97887166_97894573_1	chr15	-	613	11	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	7982	13245	7965	-13245	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTCATCTCTTTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	97894573	97887165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97887266_97888793_97888848_97889224_97889270_97891897_97891952_97892424_97892470_97892748_97892803_97892896_97892951_97893240_97893295_97893983_97894038_97894369_97894424_97894528
ENSMUSG00000022483.18_97888793_97895275_1	chr15	-	597	11	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	7280	14872	7263	-14872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATCTGCTGGTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	97895275	97888792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97888848_97889224_97889270_97891897_97891952_97892424_97892470_97892748_97892803_97892896_97892951_97893240_97893295_97893983_97894038_97894369_97894424_97894528_97894574_97895192
ENSMUSG00000022483.18_97891931_97896251_1	chr15	-	531	10	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	6304	18010	6287	-18010	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGGACGGACTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	97896251	97891930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97891952_97892424_97892470_97892748_97892803_97892896_97892951_97893240_97893295_97893983_97894038_97894369_97894424_97894528_97894574_97895192_97895271_97896179
ENSMUSG00000022483.18_97892749_97896479_1	chr15	-	552	9	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	6076	18828	6059	-18828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGGGGCCACAAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	97896479	97892748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97892803_97892896_97892951_97893240_97893295_97893983_97894038_97894369_97894424_97894528_97894574_97895192_97895271_97896179_97896285_97896425
ENSMUSG00000022483.18_97893268_97902375_1	chr15	-	573	10	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	180	19347	163	-19347	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAAAGAGGCCTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	97902375	97893267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97893295_97893983_97894038_97894369_97894424_97894528_97894574_97895192_97895271_97896179_97896285_97896425_97896480_97896579_97896613_97896734_97896768_97902285
ENSMUSG00000022483.18_97894531_97902538_1	chr15	-	599	7	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	17	20610	0	-20610	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTAAGTGTTCAGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	97902538	97894530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97894574_97895192_97895271_97896179_97896285_97896425_97896480_97896579_97896613_97896734_97896768_97902285
ENSMUSG00000022484.8_102875231_102879979_1	chr15	+	1560	2	FSM	ENSMUSG00000022484.8	ENSMUST00000001699.8	1909	2	0	349	0	-349	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATTTGTGTGTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	102875230	102879979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102876044_102879232
ENSMUSG00000022484.8_102875347_102879979_1	chr15	+	1444	2	FSM	ENSMUSG00000022484.8	ENSMUST00000001699.8	1909	2	116	349	116	-349	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATTTGTGTGTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	102875346	102879979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102876044_102879232
ENSMUSG00000022498.17_10892964_10905899_1	chr16	-	1136	5	ISM	ENSMUSG00000022498.17	ENSMUST00000038424.14	3095	12	46615	189	46576	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCTGGTGACACCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	10905899	10892963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640
ENSMUSG00000022498.17_10893289_10906232_1	chr16	-	1144	5	ISM	ENSMUSG00000022498.17	ENSMUST00000038424.14	3095	12	46282	514	46243	-514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGCCGTACACAGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	10906232	10893288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640
ENSMUSG00000022498.17_10893289_10906322_1	chr16	-	1234	5	ISM	ENSMUSG00000022498.17	ENSMUST00000038424.14	3095	12	46192	514	46153	-514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGCCGTACACAGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	10906322	10893288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640
ENSMUSG00000022498.17_10897603_10909520_1	chr16	-	1163	5	ISM	ENSMUSG00000022498.17	ENSMUST00000038424.14	3095	12	42994	4828	42955	-4828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTCCTACCGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	10909520	10897602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449
ENSMUSG00000022498.17_10902616_10911738_1	chr16	-	1195	4	ISM	ENSMUSG00000022498.17	ENSMUST00000038424.14	3095	12	40776	9841	40737	767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGAGGTGGGAGCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	10911738	10902615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_10902758_10905640_10906434_10909449_10909651_10911679
ENSMUSG00000022498.17_10905997_10946421_1	chr16	-	1144	7	ISM	ENSMUSG00000022498.17	ENSMUST00000118362.8	4248	8	6054	2614	6054	-2614	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCAAGCTTTACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	10946421	10905996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350
ENSMUSG00000022498.17_10906136_10952189_1	chr16	-	1209	8	FSM	ENSMUSG00000022498.17	ENSMUST00000118362.8	4248	8	286	2753	286	-2753	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCGCTCTGGATTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	10952189	10906135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ENSMUSG00000022498.17_10906281_10952272_1	chr16	-	1147	8	FSM	ENSMUSG00000022498.17	ENSMUST00000118362.8	4248	8	203	2898	203	-2898	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCTGCTGTAACACGGT	NA	NA	NA	NA	NA	NA	NA	NA	10952272	10906280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ENSMUSG00000022500.16_10778113_10781277_1	chr16	-	960	2	ISM	ENSMUSG00000022500.16	ENSMUST00000117360.8	763	4	12166	-575	12166	575	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCATTTCTCCATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	10781277	10778112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_10778916_10781120
ENSMUSG00000022500.16_10778280_10784450_1	chr16	-	955	3	ISM	ENSMUSG00000022500.16	ENSMUST00000117360.8	763	4	8993	-408	8993	408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGTCACAAGTACTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	10784450	10778279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_10778916_10781120_10781278_10784288
ENSMUSG00000022500.16_10778280_10810935_1	chr16	-	1044	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	50	1141	50	408	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGTCACAAGTACTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	10810935	10778279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
ENSMUSG00000022503.11_10229813_10239201_1	chr16	+	745	8	ISM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	1	3091	1	-3091	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGTCCCCAAGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	10229812	10239201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090
ENSMUSG00000022503.11_10231474_10240769_1	chr16	+	781	8	ISM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	1662	1523	1662	-1523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACTTGAAACATCGC	NA	NA	NA	NA	NA	NA	NA	NA	10231473	10240769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685
ENSMUSG00000022503.11_10235522_10241210_1	chr16	+	755	8	ISM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	5710	1082	5710	-1082	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGTCCAGACACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	10235521	10241210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ENSMUSG00000022503.11_10238933_10241435_1	chr16	+	689	5	ISM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	9121	857	9121	-857	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTGAGTCACAGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	10238932	10241435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ENSMUSG00000022503.11_10239100_10241580_1	chr16	+	765	4	ISM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	9288	712	9288	-712	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGCTGGGGGCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	10239099	10241580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_10239202_10239440_10239544_10240685_10240770_10241104
ENSMUSG00000022503.11_10240716_10241726_1	chr16	+	676	2	ISM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	10904	566	10904	-566	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCGGGACTAAGACGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	10240715	10241726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_10240770_10241104
ENSMUSG00000022505.10_10102419_10103417_1	chr16	-	160	2	ISM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	28415	2806	28415	-2806	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGAAAACTCTATTACC	NA	NA	NA	NA	NA	NA	NA	NA	10103417	10102418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_10102480_10103318
ENSMUSG00000022505.10_10110213_10131768_1	chr16	-	169	2	ISM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	64	10600	64	-10600	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGAACATGTTGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	10131768	10110212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_10110289_10131675
ENSMUSG00000022507.7_8660947_8674293_1	chr16	+	797	2	ISM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	12983	2493	12983	-2493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTTAAACAGTATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	8660946	8674293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_8661108_8673657
ENSMUSG00000022510.15_25503017_25684910_1	chr16	+	1101	8	ISM	ENSMUSG00000022510.15	ENSMUST00000115308.9	2380	11	502	10984	3	-1694	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCAGCAAGTATCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	25503016	25684910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_25503102_25582015_25582145_25582913_25583047_25639137_25639393_25681028_25681216_25682424_25682541_25683996_25684107_25684824
ENSMUSG00000022510.15_25582015_25687004_1	chr16	+	1156	8	ISM	ENSMUSG00000022510.15	ENST00000418709.6	2640	11	79001	9637	-38651	400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCTCATATTCTCACGG	NA	NA	NA	NA	NA	NA	NA	NA	25582014	25687004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_25582145_25582913_25583047_25639137_25639393_25681028_25681216_25682424_25682541_25683996_25684107_25684824_25684962_25686916
ENSMUSG00000022510.15_25620825_25682520_1	chr16	+	310	3	ISM	ENSMUSG00000022510.15	ENST00000449992.5	1506	11	15	25534	15	-4084	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTATGAGCCACCACAG	NA	NA	NA	NA	NA	NA	NA	NA	25620824	25682520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_25620852_25681028_25681216_25682424
ENSMUSG00000022510.15_25639140_25695413_1	chr16	+	1060	8	ISM	ENSMUSG00000022510.15	ENSMUST00000115305.2	1729	9	18474	481	18330	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGGGGAGAAGCTCCGAC	NA	NA	NA	NA	NA	NA	NA	NA	25639139	25695413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_25639393_25681028_25681216_25682424_25682541_25683996_25684107_25684824_25684962_25686916_25687000_25689746_25689884_25695376
ENSMUSG00000022510.15_25639188_25695484_1	chr16	+	1083	8	ISM	ENSMUSG00000022510.15	ENSMUST00000115305.2	1729	9	18522	410	18378	-410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATAGGTCCCCAGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	25639187	25695484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_25639393_25681028_25681216_25682424_25682541_25683996_25684107_25684824_25684962_25686916_25687000_25689746_25689884_25695376
ENSMUSG00000022510.15_25639282_25695582_1	chr16	+	1087	8	ISM	ENSMUSG00000022510.15	ENSMUST00000115305.2	1729	9	18616	312	18472	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACAGGACTTGAAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	25639281	25695582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_25639393_25681028_25681216_25682424_25682541_25683996_25684107_25684824_25684962_25686916_25687000_25689746_25689884_25695376
ENSMUSG00000022510.15_25681052_25695730_1	chr16	+	1101	7	ISM	ENSMUSG00000022510.15	ENSMUST00000115305.2	1729	9	60386	164	60242	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGGAGCCGCGACTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	25681051	25695730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_25681216_25682424_25682541_25683996_25684107_25684824_25684962_25686916_25687000_25689746_25689884_25695376
ENSMUSG00000022510.15_25681128_25695787_1	chr16	+	1082	7	ISM	ENSMUSG00000022510.15	ENSMUST00000115305.2	1729	9	60462	107	60318	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAATCCATTGGGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	25681127	25695787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_25681216_25682424_25682541_25683996_25684107_25684824_25684962_25686916_25687000_25689746_25689884_25695376
ENSMUSG00000022510.15_25682424_25695894_1	chr16	+	1102	6	ISM	ENSMUSG00000022510.15	ENSMUST00000115305.2	1729	9	61758	0	61614	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGTGTATTTTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	25682423	25695894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_25682541_25683996_25684107_25684824_25684962_25686916_25687000_25689746_25689884_25695376
ENSMUSG00000022510.15_25684836_25696122_1	chr16	+	1092	4	ISM	ENSMUSG00000022510.15	ENSMUST00000115305.2	1729	9	64170	-228	64026	228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGTGCCAACGCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	25684835	25696122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_25684962_25686916_25687000_25689746_25689884_25695376
ENSMUSG00000022510.15_25684895_25696179_1	chr16	+	1090	4	ISM	ENSMUSG00000022510.15	ENSMUST00000115305.2	1729	9	64229	-285	64085	285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAAATATTGCCCCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	25684894	25696179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_25684962_25686916_25687000_25689746_25689884_25695376
ENSMUSG00000022510.15_25684912_25701329_1	chr16	+	323	4	ISM	ENSMUSG00000022510.15	ENST00000449992.5	1506	11	64102	6725	64102	4688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAACAGCATGAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	25684911	25701329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_25684962_25686916_25687000_25689746_25689884_25701276
ENSMUSG00000022510.15_25689819_25696420_1	chr16	+	1109	2	ISM	ENSMUSG00000022510.15	ENSMUST00000115305.2	1729	9	69153	-526	69009	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGAGAGCTAAGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	25689818	25696420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_25689884_25695376
ENSMUSG00000022510.15_25701384_25707797_1	chr16	+	330	4	ISM	ENSMUSG00000022510.15	ENST00000449992.5	1506	11	80574	257	80574	-257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTGGAAGGGCATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	25701383	25707797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_25701435_25703560_25703706_25704955_25705050_25707757
ENSMUSG00000022510.15_25703593_25707886_1	chr16	+	336	3	ISM	ENSMUSG00000022510.15	ENST00000449992.5	1506	11	82783	168	82783	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGGGCTCCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	25703592	25707886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_25703706_25704955_25705050_25707757
ENSMUSG00000022510.15_25703655_25707927_1	chr16	+	315	3	ISM	ENSMUSG00000022510.15	ENST00000449992.5	1506	11	82845	127	82845	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCCGTGCGCTTTACCC	NA	NA	NA	NA	NA	NA	NA	NA	25703654	25707927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_25703706_25704955_25705050_25707757
ENSMUSG00000022514.15_26495459_26533849_1	chr16	+	1680	9	ISM	ENSMUSG00000022514.15	ENST00000439062.6	1688	10	94982	0	94952	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1698	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTCATGGGAGGAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	26495458	26533849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519837_26519987_26529230_26529381_26530866_26531011_26533450
ENSMUSG00000022514.15_26495609_26533849_1	chr16	+	1525	9	NNC	ENSMUSG00000022514.15	novel	1688	10	NA	NA	95102	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTCATGGGAGGAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	26495608	26533849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517581_26517704_26519837_26519987_26529230_26529381_26530866_26531011_26533450
ENSMUSG00000022514.15_26495609_26533849_2	chr16	+	1522	9	NNC	ENSMUSG00000022514.15	novel	1688	10	NA	NA	95102	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTCATGGGAGGAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	26495608	26533849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519837_26519987_26529230_26529381_26530874_26531011_26533450
ENSMUSG00000022514.15_26495609_26533849_3	chr16	+	1524	9	NNC	ENSMUSG00000022514.15	novel	1688	10	NA	NA	95102	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTCATGGGAGGAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	26495608	26533849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519843_26519987_26529230_26529381_26530866_26531011_26533450
ENSMUSG00000022514.15_26495609_26533849_4	chr16	+	1523	9	NNC	ENSMUSG00000022514.15	novel	1688	10	NA	NA	95102	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTCATGGGAGGAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	26495608	26533849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_26495745_26498852_26499033_26511494_26511661_26513971_26514044_26517576_26517704_26519837_26519987_26529230_26529381_26530866_26531011_26533450
ENSMUSG00000022514.15_26495609_26533849_5	chr16	+	1530	9	ISM	ENSMUSG00000022514.15	ENST00000439062.6	1688	10	95132	0	95102	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTCATGGGAGGAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	26495608	26533849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519837_26519987_26529230_26529381_26530866_26531011_26533450
ENSMUSG00000022514.15_26495609_26533849_6	chr16	+	1524	9	NNC	ENSMUSG00000022514.15	novel	1688	10	NA	NA	95102	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTCATGGGAGGAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	26495608	26533849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_26495739_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519837_26519987_26529230_26529381_26530866_26531011_26533450
ENSMUSG00000022515.7_4759316_4761471_1	chr16	-	827	6	ISM	ENSMUSG00000022515.7	ENSMUST00000023157.6	2398	17	20566	16	20566	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATTAGATGCAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	4761471	4759315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422
ENSMUSG00000022515.7_4759487_4763972_1	chr16	-	803	7	ISM	ENSMUSG00000022515.7	ENSMUST00000023157.6	2398	17	18065	187	18065	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGGGCTCAGCACCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	4763972	4759486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918
ENSMUSG00000022515.7_4759790_4765244_1	chr16	-	788	7	ISM	ENSMUSG00000022515.7	ENSMUST00000023157.6	2398	17	16793	490	16793	-490	internal_fragment	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCGGGAACCGTAGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	4765244	4759789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128
ENSMUSG00000022515.7_4760082_4765601_1	chr16	-	860	7	ISM	ENSMUSG00000022515.7	ENSMUST00000023157.6	2398	17	16436	782	16436	-782	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGGTAAGTCTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	4765601	4760081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512
ENSMUSG00000022515.7_4761449_4768608_1	chr16	-	789	6	ISM	ENSMUSG00000022515.7	ENSMUST00000023157.6	2398	17	13429	2149	13429	-2149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCTTGCCATTCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	4768608	4761448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476
ENSMUSG00000022515.7_4763633_4775945_1	chr16	-	1437	9	ISM	ENSMUSG00000022515.7	ENSMUST00000229765.2	1779	11	6123	0	6092	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTAATATGCCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	4775945	4763632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831
ENSMUSG00000022515.7_4768477_4778432_1	chr16	-	867	6	ISM	ENSMUSG00000022515.7	ENSMUST00000229765.2	1779	11	3636	4844	3605	-4844	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGCCACGGTTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	4778432	4768476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260
ENSMUSG00000022516.11_4756976_4758124_1	chr16	+	508	3	FSM	ENSMUSG00000022516.11	ENSMUST00000230931.2	1618	3	351	759	0	-756	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGCAACGCCTTCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	4756975	4758124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_4757158_4757241_4757503_4758059
ENSMUSG00000022516.11_4756992_4758170_1	chr16	+	538	3	FSM	ENSMUSG00000022516.11	ENSMUST00000230931.2	1618	3	367	713	6	-710	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTTAAGGTACTCAACAT	NA	NA	NA	NA	NA	NA	NA	NA	4756991	4758170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_4757158_4757241_4757503_4758059
ENSMUSG00000022516.11_4756992_4758563_1	chr16	+	1006	3	FSM	ENSMUSG00000022516.11	ENSMUST00000050881.10	1329	3	6	317	6	-317	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTCCCAGCTAGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	4756991	4758563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_4757158_4757241_4757578_4758059
ENSMUSG00000022516.11_4757423_4758451_1	chr16	+	472	2	ISM	ENSMUSG00000022516.11	ENSMUST00000229961.2	1162	4	447	445	437	-429	intron_retention	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTCTCAGGTTGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	4757422	4758451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4757503_4758059
ENSMUSG00000022517.18_4704250_4745622_1	chr16	+	1149	12	ISM	ENSMUSG00000022517.18	ENSMUST00000070658.16	3138	17	134	10538	0	-7331	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCAGCTCCCCTCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	4704249	4745622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538
ENSMUSG00000022517.18_4725231_4745765_1	chr16	+	1205	11	ISM	ENSMUSG00000022517.18	ENSMUST00000229038.2	2250	17	21099	9520	20981	-7188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGCCAATGTCCAACCT	NA	NA	NA	NA	NA	NA	NA	NA	4725230	4745765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538
ENSMUSG00000022517.18_4729184_4740484_1	chr16	+	528	7	ISM	ENSMUSG00000022517.18	ENSMUST00000230990.2	2519	17	24934	12469	24934	-12469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGAGTGTGTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	4729183	4740484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457
ENSMUSG00000022517.18_4729184_4750111_1	chr16	+	1213	12	ISM	ENSMUSG00000022517.18	ENSMUST00000229038.2	2250	17	25052	5174	24934	-2842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCATGGTTGCAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	4729183	4750111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063
ENSMUSG00000022517.18_4729233_4740537_1	chr16	+	532	7	ISM	ENSMUSG00000022517.18	ENSMUST00000230990.2	2519	17	24983	12416	24983	-12416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCGACACCTGTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	4729232	4740537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457
ENSMUSG00000022517.18_4731554_4754815_1	chr16	+	1171	12	ISM	ENSMUSG00000022517.18	ENSMUST00000023159.10	3095	16	27441	1344	27304	-445	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTGAGTGGCTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	4731553	4754815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ENSMUSG00000022517.18_4733615_4744238_1	chr16	+	572	7	ISM	ENSMUSG00000022517.18	ENSMUST00000230990.2	2519	17	29365	8715	29365	-8715	internal_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTGTTCGGTCATAC	NA	NA	NA	NA	NA	NA	NA	NA	4733614	4744238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172
ENSMUSG00000022517.18_4733989_4745555_1	chr16	+	500	7	ISM	ENSMUSG00000022517.18	ENSMUST00000230990.2	2519	17	29739	7398	29739	-7398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCTATGAGCCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	4733988	4745555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538
ENSMUSG00000022517.18_4740469_4748569_1	chr16	+	567	5	ISM	ENSMUSG00000022517.18	ENSMUST00000230990.2	2519	17	36219	4384	36219	-4384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTCCCCATCCATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	4740468	4748569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554
ENSMUSG00000022517.18_4740500_4755175_1	chr16	+	1137	7	ISM	ENSMUSG00000022517.18	ENSMUST00000023159.10	3095	16	36387	984	36250	-85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	870	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAGCATAAGAGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	4740499	4755175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ENSMUSG00000022517.18_4740561_4748607_1	chr16	+	513	5	ISM	ENSMUSG00000022517.18	ENSMUST00000230990.2	2519	17	36311	4346	36311	-4346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGACTCGGATGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4740560	4748607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554
ENSMUSG00000022517.18_4742287_4755285_1	chr16	+	1129	6	ISM	ENSMUSG00000022517.18	ENSMUST00000023159.10	3095	16	38174	874	38037	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1049	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCTGTCACTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	4742286	4755285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ENSMUSG00000022517.18_4744173_4750111_1	chr16	+	508	5	ISM	ENSMUSG00000022517.18	ENSMUST00000230990.2	2519	17	39923	2842	39923	-2842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCATGGTTGCAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	4744172	4750111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063
ENSMUSG00000022517.18_4745542_4755619_1	chr16	+	1395	6	ISM	ENSMUSG00000022517.18	ENSMUST00000229038.2	2250	17	41410	-334	41292	334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCTTCTTACTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	4745541	4755619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ENSMUSG00000022517.18_4748552_4755020_1	chr16	+	530	4	ISM	ENSMUSG00000022517.18	ENST00000262370.12	2230	17	44407	240	44302	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCACAGTGGGTTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	4748551	4755020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4748679_4748976_4749020_4750063_4750163_4754759
ENSMUSG00000022519.15_4300777_4304276_1	chr16	-	508	2	ISM	ENSMUSG00000022519.15	ENSMUST00000023161.8	5000	7	36663	2685	36663	-2685	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGATCGCTTTTATTCGA	NA	NA	NA	NA	NA	NA	NA	NA	4304276	4300776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4301149_4304140
ENSMUSG00000022528.9_29884158_29886298_1	chr16	+	1152	4	FSM	ENSMUSG00000022528.9	ENSMUST00000023171.8	1468	4	0	316	0	-316	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGGACACTAAAAACGAACT	NA	NA	NA	NA	NA	NA	NA	NA	29884157	29886298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_29884517_29884648_29884745_29884980_29885069_29885689
ENSMUSG00000022528.9_29884647_29886614_1	chr16	+	1111	3	ISM	ENSMUSG00000022528.9	ENSMUST00000023171.8	1468	4	489	0	489	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAGAACTGATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	29884646	29886614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_29884745_29884980_29885069_29885689
ENSMUSG00000022533.15_30132451_30133961_1	chr16	-	1226	2	ISM	ENSMUSG00000022533.15	ENST00000642744.1	6683	31	51763	1210	51763	-1210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGACAGTTCATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	30133961	30132450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30133544_30133828
ENSMUSG00000022533.15_30132754_30134259_1	chr16	-	1221	2	ISM	ENSMUSG00000022533.15	ENST00000642744.1	6683	31	51465	1513	51465	-1513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAAAATGTATATTATTA	NA	NA	NA	NA	NA	NA	NA	NA	30134259	30132753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30133544_30133828
ENSMUSG00000022533.15_30132812_30134323_1	chr16	-	1227	2	ISM	ENSMUSG00000022533.15	ENST00000642744.1	6683	31	51401	1571	51401	-1571	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTATTACTGCTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	30134323	30132811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30133544_30133828
ENSMUSG00000022533.15_30133354_30141754_1	chr16	-	1236	4	ISM	ENSMUSG00000022533.15	ENST00000642744.1	6683	31	43970	2113	43970	-2113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTGAATAATGGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	30141754	30133353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30133544_30133828_30134720_30140623_30140714_30141689
ENSMUSG00000022533.15_30134005_30152666_1	chr16	-	1253	6	ISM	ENSMUSG00000022533.15	ENST00000642744.1	6683	31	33058	2764	33058	-2764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTCTGGTTTTATATT	NA	NA	NA	NA	NA	NA	NA	NA	30152666	30134004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576
ENSMUSG00000022533.15_30134217_30156393_1	chr16	-	1267	8	ISM	ENSMUSG00000022533.15	ENST00000642744.1	6683	31	29331	2976	29331	-2976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGAAAGTTCTTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	30156393	30134216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319
ENSMUSG00000022533.15_30134378_30157333_1	chr16	-	1213	9	ISM	ENSMUSG00000022533.15	ENST00000642744.1	6683	31	28391	3137	28391	-3137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTGTACGATTATTAAC	NA	NA	NA	NA	NA	NA	NA	NA	30157333	30134377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249
ENSMUSG00000022533.15_30151063_30162331_1	chr16	-	1218	11	ISM	ENSMUSG00000022533.15	ENST00000642744.1	6683	31	23393	19822	23393	-19822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTTTTCAAAAGGAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	30162331	30151062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251
ENSMUSG00000022533.15_30152607_30162593_1	chr16	-	1220	11	ISM	ENSMUSG00000022533.15	ENST00000642744.1	6683	31	23131	21366	23131	-21366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTATAAAGTGTGCGATC	NA	NA	NA	NA	NA	NA	NA	NA	30162593	30152606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460
ENSMUSG00000022533.15_30155009_30163457_1	chr16	-	1234	11	ISM	ENSMUSG00000022533.15	ENST00000642744.1	6683	31	22267	23768	22267	-23768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGTATTTTGCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30163457	30155008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324
ENSMUSG00000022533.15_30156357_30166541_1	chr16	-	1222	11	ISM	ENSMUSG00000022533.15	ENST00000642744.1	6683	31	19183	25116	19183	-25116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATCCAGTACTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	30166541	30156356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443
ENSMUSG00000022533.15_30158661_30169841_1	chr16	-	1227	10	ISM	ENSMUSG00000022533.15	ENST00000642744.1	6683	31	15883	27420	15883	-27420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTGCGATGAATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	30169841	30158660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168688_30169776
ENSMUSG00000022533.15_30159148_30170119_1	chr16	-	1234	10	ISM	ENSMUSG00000022533.15	ENST00000642744.1	6683	31	15605	27907	15605	-27907	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCTGAAGCATTACCT	NA	NA	NA	NA	NA	NA	NA	NA	30170119	30159147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168688_30169776_30169939_30170046
ENSMUSG00000022533.15_30162278_30171188_1	chr16	-	1224	9	ISM	ENSMUSG00000022533.15	ENST00000642744.1	6683	31	14536	31037	14536	-31037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCATAAAGTACAGCATAT	NA	NA	NA	NA	NA	NA	NA	NA	30171188	30162277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168688_30169776_30169939_30170046_30170227_30171085
ENSMUSG00000022533.15_30162526_30174633_1	chr16	-	1229	10	ISM	ENSMUSG00000022533.15	ENST00000642744.1	6683	31	11091	31285	11091	-31285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGATGGATGCCTACATGA	NA	NA	NA	NA	NA	NA	NA	NA	30174633	30162525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168688_30169776_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570
ENSMUSG00000022533.15_30168540_30181476_1	chr16	-	1225	10	NIC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	4248	-37299	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTGGACAGCTGAACC	NA	NA	NA	NA	NA	NA	NA	NA	30181476	30168539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr16_-_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30180237_30180309_30180631_30180803_30181393
ENSMUSG00000022533.15_30168593_30181533_1	chr16	-	1229	10	NIC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	4191	-37352	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAGAAGACTGAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	30181533	30168592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr16_-_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30180237_30180309_30180631_30180803_30181393
ENSMUSG00000022536.15_4831899_4836304_1	chr16	-	1609	2	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	31417	126	31417	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATGAACATTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	4836304	4831898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4833467_4836263
ENSMUSG00000022536.15_4831954_4836378_1	chr16	-	1628	2	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	31343	181	31343	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTTGAAATGACAGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	4836378	4831953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4833467_4836263
ENSMUSG00000022536.15_4832212_4837182_1	chr16	-	1592	4	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	30539	439	30539	-439	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCCATTCACTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	4837182	4832211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150
ENSMUSG00000022536.15_4832273_4837236_1	chr16	-	1585	4	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	30485	500	30485	-500	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGGGATAAGGATCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	4837236	4832272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150
ENSMUSG00000022536.15_4832382_4838232_1	chr16	-	1655	5	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	29489	609	29489	-609	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGAAGAGGGGACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	4838232	4832381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130
ENSMUSG00000022536.15_4832588_4844433_1	chr16	-	1604	7	ISM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	23294	815	23288	-815	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACAGGTCCCCTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	4844433	4832587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371
ENSMUSG00000022536.15_4832971_4854175_1	chr16	-	1604	12	ISM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	13552	1198	13546	-1198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGGACAGAGACTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	4854175	4832970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099
ENSMUSG00000022536.15_4833000_4844438_1	chr16	-	1215	7	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	23283	1227	23283	-1227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGGGAGCACTGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	4844438	4832999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371
ENSMUSG00000022536.15_4833036_4854229_1	chr16	-	1593	12	ISM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	13498	1263	13492	-1263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCTTCTGGTCAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	4854229	4833035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099
ENSMUSG00000022536.15_4833100_4854315_1	chr16	-	1615	12	ISM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	13412	1327	13406	-1327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACACACACACCCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	4854315	4833099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099
ENSMUSG00000022536.15_4833107_4847255_1	chr16	-	1199	8	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	20466	1334	20466	-1334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCACACACACAC	NA	NA	NA	NA	NA	NA	NA	NA	4847255	4833106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197
ENSMUSG00000022536.15_4833376_4854186_1	chr16	-	1228	12	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	13535	1603	13535	-1603	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTCCCATCTTCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	4854186	4833375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099
ENSMUSG00000022536.15_4836261_4854339_1	chr16	-	1293	11	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	13382	4488	13382	-4488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCACAGCAAGTGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	4854339	4836260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099
ENSMUSG00000022536.15_4836711_4854835_1	chr16	-	1211	11	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	12886	4938	12886	-4938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAAAGTAAGTCACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	4854835	4836710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782
ENSMUSG00000022536.15_4836762_4854887_1	chr16	-	1212	11	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	12834	4989	12834	-4989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACATCCTTAATCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	4854887	4836761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782
ENSMUSG00000022537.19_30333606_30359727_1	chr16	-	635	6	NNC	ENSMUSG00000022537.19	novel	1240	11	NA	NA	9598	8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGGGGAACTCCTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	30359727	30333605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_30333641_30337117_30337151_30348229_30348389_30356271_30356377_30358224_30358357_30359556
ENSMUSG00000022537.19_30333606_30369346_1	chr16	-	1327	10	NNC	ENSMUSG00000022537.19	novel	1300	10	NA	NA	-21	8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGGGGAACTCCTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	30369346	30333605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_30333641_30348229_30348389_30356271_30356377_30358224_30358357_30359556_30359818_30362219_30362307_30362494_30362652_30363939_30364038_30366160_30366288_30369180
ENSMUSG00000022537.19_30333606_30369346_2	chr16	-	1329	10	FSM	ENSMUSG00000022537.19	ENST00000392432.6	1300	10	-21	-8	-21	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGGGGAACTCCTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	30369346	30333605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_30333641_30348229_30348389_30356271_30356377_30358224_30358357_30359556_30359818_30362219_30362307_30362494_30362654_30363939_30364038_30366160_30366288_30369180
ENSMUSG00000022537.19_30333606_30369346_3	chr16	-	1239	10	NIC	ENSMUSG00000022537.19	novel	1240	11	NA	NA	-21	8	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGGGGAACTCCTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	30369346	30333605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr16_-_30333641_30348229_30348389_30356271_30356377_30358224_30358357_30359556_30359728_30362219_30362307_30362494_30362654_30363939_30364038_30366160_30366288_30369180
ENSMUSG00000022537.19_30333606_30369346_4	chr16	-	1330	10	NIC	ENSMUSG00000022537.19	novel	1300	10	NA	NA	-21	8	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGGGGAACTCCTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	30369346	30333605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr16_-_30333641_30348229_30348389_30356271_30356377_30358224_30358357_30359556_30359818_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
ENSMUSG00000022537.19_30348230_30369346_1	chr16	-	1200	9	ISM	ENSMUSG00000022537.19	ENST00000381975.7	1206	10	-21	14616	-21	-14616	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACAGGGGCTGCCCTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	30369346	30348229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30348385_30356271_30356377_30358224_30358357_30359556_30359728_30362219_30362307_30362494_30362654_30363939_30364038_30366160_30366288_30369180
ENSMUSG00000022538.21_30380189_30383565_1	chr16	-	594	2	ISM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	22845	877	22845	-877	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATATTCTTATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	30383565	30380188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30380681_30383463
ENSMUSG00000022538.21_30380432_30386558_1	chr16	-	533	4	ISM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	19852	1120	19852	-1120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCGCTGCCGTGCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	30386558	30380431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528
ENSMUSG00000022538.21_30380492_30386601_1	chr16	-	516	4	ISM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	19809	1180	19809	-1180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGACGGCAGGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	30386601	30380491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528
ENSMUSG00000022538.21_30380595_30388017_1	chr16	-	564	5	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	18393	-1283	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGAGAATGTACCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	30388017	30380594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386658_30387922
ENSMUSG00000022538.21_30383496_30388249_1	chr16	-	598	5	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	18161	-4184	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTAGTCGACAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	30388249	30383495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_30383638_30384247_30384328_30386528_30386658_30387922_30388067_30388146
ENSMUSG00000022538.21_30384279_30390093_1	chr16	-	526	5	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	16317	-4967	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACGGTACATCCTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	30390093	30384278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_30384328_30386528_30386658_30387931_30388067_30388146_30388249_30389982
ENSMUSG00000022538.21_30386601_30390213_1	chr16	-	525	4	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	16197	-7289	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAAGCCTAGAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	30390213	30386600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_30386658_30387931_30388067_30388146_30388249_30389982
ENSMUSG00000022538.21_30390189_30400960_1	chr16	-	578	5	ISM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	5450	10877	5450	-10877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGCAGACGTGTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	30400960	30390188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873
ENSMUSG00000022538.21_30390293_30401416_1	chr16	-	542	6	ISM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	4994	10981	4994	-10981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCGAATGAAATCCCACACA	NA	NA	NA	NA	NA	NA	NA	NA	30401416	30390292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348
ENSMUSG00000022538.21_30392106_30404498_1	chr16	-	565	6	ISM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	1912	12794	1912	-12794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGCCTGGGCTGTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	30404498	30392105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371
ENSMUSG00000022538.21_30393363_30406357_1	chr16	-	586	6	ISM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	53	14051	53	-14051	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGAACTTTGCCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	30406357	30393362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ENSMUSG00000022542.8_4805395_4809807_1	chr16	-	406	5	ISM	ENSMUSG00000022542.8	ENST00000396693.9	1070	8	4672	199	4672	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACAGCTGATGGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	4809807	4805394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4805523_4805610_4805663_4806342_4806440_4809590_4809687_4809774
ENSMUSG00000022542.8_4805467_4809844_1	chr16	-	371	5	ISM	ENSMUSG00000022542.8	ENST00000396693.9	1070	8	4635	271	4635	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTACTCAGACTCAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	4809844	4805466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4805523_4805610_4805663_4806342_4806440_4809590_4809687_4809774
ENSMUSG00000022542.8_4805611_4811681_1	chr16	-	446	5	ISM	ENSMUSG00000022542.8	ENST00000396693.9	1070	8	2798	415	2798	-415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGTGTGGGGTCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4811681	4805610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4805663_4806342_4806440_4809590_4809687_4809774_4809893_4811598
ENSMUSG00000022542.8_4806410_4811794_1	chr16	-	363	5	ISM	ENSMUSG00000022542.8	ENST00000396693.9	1070	8	2685	1214	2685	-1214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCGAGAGCACATAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	4811794	4806409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4806440_4809590_4809687_4809774_4809893_4811598_4811681_4811757
ENSMUSG00000022542.8_4809632_4814332_1	chr16	-	406	5	ISM	ENSMUSG00000022542.8	ENST00000396693.9	1070	8	147	4436	147	-4436	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGAGGATGTCAATGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	4814332	4809631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4809687_4809774_4809893_4811598_4811681_4811757_4811884_4814307
ENSMUSG00000022542.8_4809816_4814390_1	chr16	-	368	4	ISM	ENSMUSG00000022542.8	ENST00000396693.9	1070	8	89	4620	89	-4620	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCCTGACCATTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	4814390	4809815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4809893_4811598_4811681_4811757_4811884_4814307
ENSMUSG00000022542.8_4809840_4814468_1	chr16	-	422	4	ISM	ENSMUSG00000022542.8	ENST00000396693.9	1070	8	11	4644	11	-4644	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCGGTGATCGCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	4814468	4809839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4809893_4811598_4811681_4811757_4811884_4814307
ENSMUSG00000022544.15_5062556_5065381_1	chr16	-	759	2	ISM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	8466	540	8419	-540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGTAGCCAGATCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	5065381	5062555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5063250_5065316
ENSMUSG00000022544.15_5062614_5065428_1	chr16	-	748	2	ISM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	8419	598	8372	-598	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTTGGCAGGGACACTG	NA	NA	NA	NA	NA	NA	NA	NA	5065428	5062613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5063250_5065316
ENSMUSG00000022544.15_5062743_5066577_1	chr16	-	803	3	ISM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	7270	727	7223	-727	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGACTGTCCTGTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	5066577	5062742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5063250_5065316_5065464_5066428
ENSMUSG00000022544.15_5062997_5066876_1	chr16	-	767	4	ISM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	6971	981	6924	-981	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACACAGAGAAAACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	5066876	5062996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775
ENSMUSG00000022544.15_5063202_5068387_1	chr16	-	746	6	ISM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	5460	1186	5413	-1186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCCCTTACGAAGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	5068387	5063201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338
ENSMUSG00000022544.15_5065403_5073793_1	chr16	-	796	7	ISM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	54	3387	7	1026	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCAGAGGAAGAGCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	5073793	5065402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ENSMUSG00000022544.15_5066429_5066910_1	chr16	-	398	2	NNC	ENSMUSG00000022544.15	novel	559	4	NA	NA	6890	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGCCCCAGCAGCAACC	NA	NA	NA	NA	NA	NA	NA	NA	5066910	5066428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_5066699_5066782
ENSMUSG00000022544.15_5066429_5070954_1	chr16	-	466	3	ISM	ENSMUSG00000022544.15	ENST00000587133.1	559	4	2846	0	2846	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGCCCCAGCAGCAACC	NA	NA	NA	NA	NA	NA	NA	NA	5070954	5066428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5066695_5066775_5066910_5070888
ENSMUSG00000022544.15_5066429_5073793_1	chr16	-	701	6	FSM	ENSMUSG00000022544.15	ENST00000513466.5	708	6	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGCCCCAGCAGCAACC	NA	NA	NA	NA	NA	NA	NA	NA	5073793	5066428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_5066695_5066775_5066878_5067210_5067313_5068338_5068420_5070888_5070950_5073704
ENSMUSG00000022544.15_5066541_5073793_1	chr16	-	440	4	FSM	ENSMUSG00000022544.15	ENST00000587133.1	559	4	7	112	7	-112	multi-exon	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACCCCCATTGACGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	5073793	5066540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_5066695_5066775_5066910_5070888_5070952_5073704
ENSMUSG00000022545.14_12927799_12966096_1	chr16	+	2835	12	NNC	ENSMUSG00000022545.14	novel	2889	12	NA	NA	29	-27	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCCAAAGGCAGAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	12927798	12966096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_12928006_12929594_12929776_12931590_12931697_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948603_12950721_12950815_12962266_12962378_12965389
ENSMUSG00000022545.14_12927909_12966100_1	chr16	+	2731	12	NNC	ENSMUSG00000022545.14	novel	2889	12	NA	NA	139	-23	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAGGCAGAGTGAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	12927908	12966100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_12928006_12929594_12929776_12931590_12931697_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948603_12950721_12950815_12962264_12962378_12965389
ENSMUSG00000022546.6_76581082_76583266_1	chr15	+	1178	9	ISM	ENSMUSG00000022546.6	ENSMUST00000023203.6	1792	11	149	620	149	-582	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGATCCGCTGCAACCCGG	NA	NA	NA	NA	NA	NA	NA	NA	76581081	76583266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76581220_76581358_76581449_76581521_76581631_76581741_76581876_76582039_76582284_76582502_76582583_76582655_76582793_76582914_76583090_76583195
ENSMUSG00000022550.19_76460559_76479356_1	chr15	+	1534	13	ISM	ENSMUSG00000022550.19	ENSMUST00000162503.8	2040	15	1	660	1	-660	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCATTGCCACGGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	76460558	76479356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213
ENSMUSG00000022550.19_76471957_76479466_1	chr15	+	1509	12	ISM	ENSMUSG00000022550.19	ENSMUST00000160784.8	1998	15	11368	550	11368	-550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGTGACCCAAGGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	76471956	76479466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213
ENSMUSG00000022550.19_76473375_76479850_1	chr15	+	1527	13	ISM	ENSMUSG00000022550.19	ENSMUST00000162503.8	2040	15	12817	166	12786	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGAGCCAGAATGACT	NA	NA	NA	NA	NA	NA	NA	NA	76473374	76479850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ENSMUSG00000022550.19_76477757_76480016_1	chr15	+	1447	11	ISM	ENSMUSG00000022550.19	ENSMUST00000162503.8	2040	15	17199	0	17168	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTTTGTGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	76477756	76480016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ENSMUSG00000022551.9_76227767_76230460_1	chr15	+	1467	7	NNC	ENSMUSG00000022551.9	novel	1520	7	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCATGGTGTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	76227766	76230460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76227893_76228501_76228699_76228790_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ENSMUSG00000022551.9_76227767_76230460_2	chr15	+	1470	7	NNC	ENSMUSG00000022551.9	novel	1520	7	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCATGGTGTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	76227766	76230460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76227893_76228501_76228699_76228781_76228909_76229017_76229170_76229252_76229414_76229676_76229778_76229854
ENSMUSG00000022551.9_76227767_76230460_3	chr15	+	1468	7	NNC	ENSMUSG00000022551.9	novel	1520	7	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCATGGTGTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	76227766	76230460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229770_76229854
ENSMUSG00000022552.17_76231240_76235025_1	chr15	-	1443	9	NNC	ENSMUSG00000022552.17	novel	1734	9	NA	NA	286	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTTCTGTTCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	76235025	76231239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232423_76232500_76232636_76234254_76234430_76234680
ENSMUSG00000022552.17_76231240_76235025_2	chr15	-	1448	9	FSM	ENSMUSG00000022552.17	ENSMUST00000023211.16	1734	9	286	0	286	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTTCTGTTCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	76235025	76231239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234254_76234430_76234680
ENSMUSG00000022552.17_76231542_76235247_1	chr15	-	1441	8	ISM	ENSMUSG00000022552.17	ENSMUST00000023211.16	1734	9	64	302	64	-302	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGCTGTGAGATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	76235247	76231541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234254_76234430_76234680
ENSMUSG00000022553.17_76235494_76237459_1	chr15	+	869	5	ISM	ENSMUSG00000022553.17	ENSMUST00000160853.8	1651	8	0	1114	0	-1113	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCTCACGTCTTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	76235493	76237459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76235860_76236666_76236753_76236845_76236975_76237046_76237213_76237337
ENSMUSG00000022553.17_76235609_76237459_1	chr15	+	801	5	ISM	ENSMUSG00000022553.17	ENSMUST00000160172.8	1537	7	82	1121	64	-1113	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCTCACGTCTTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	76235608	76237459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76235860_76236619_76236753_76236845_76236975_76237046_76237213_76237337
ENSMUSG00000022553.17_76235609_76237570_1	chr15	+	912	5	ISM	ENSMUSG00000022553.17	ENSMUST00000160172.8	1537	7	82	1010	64	-1002	intron_retention	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGAAGATGGAAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	76235608	76237570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76235860_76236619_76236753_76236845_76236975_76237046_76237213_76237337
ENSMUSG00000022553.17_76235777_76237846_1	chr15	+	767	7	ISM	ENSMUSG00000022553.17	ENSMUST00000160853.8	1651	8	283	727	232	-726	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGATGAAGAGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	76235776	76237846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76235860_76236666_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785
ENSMUSG00000022553.17_76235835_76237894_1	chr15	+	757	7	ISM	ENSMUSG00000022553.17	ENSMUST00000160853.8	1651	8	341	679	290	-678	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACCAGCACCATGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	76235834	76237894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76235860_76236666_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785
ENSMUSG00000022553.17_76236665_76237921_1	chr15	+	842	5	ISM	ENSMUSG00000022553.17	ENST00000534585.5	1724	7	1120	652	1120	-651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGTGGCTGTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	76236664	76237921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76236753_76236845_76236975_76237046_76237213_76237337_76237661_76237785
ENSMUSG00000022553.17_76236844_76238191_1	chr15	+	900	5	ISM	ENSMUSG00000022553.17	ENST00000534585.5	1724	7	1299	382	1299	-381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAAGGCTATACCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	76236843	76238191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76236975_76237046_76237213_76237337_76237661_76237785_76237921_76238046
ENSMUSG00000022555.13_76386435_76386859_1	chr15	-	233	3	ISM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	9292	220	9292	-220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGCCAAAGGCCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	76386859	76386434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76386589_76386691_76386755_76386843
ENSMUSG00000022555.13_76386554_76387051_1	chr15	-	219	4	ISM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	9100	339	9100	-339	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAACTATGGCAATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	76387051	76386553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018
ENSMUSG00000022555.13_76387019_76387398_1	chr15	-	224	3	ISM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	8753	804	8753	-804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGATGGTGTACGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	76387398	76387018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76387085_76387158_76387272_76387353
ENSMUSG00000022555.13_76388102_76388601_1	chr15	-	230	3	ISM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	7550	1887	7550	-1887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTGCCGCCAGCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	76388601	76388101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76388173_76388314_76388421_76388548
ENSMUSG00000022556.12_76361622_76382933_1	chr15	+	1351	9	ISM	ENSMUSG00000022556.12	ENSMUST00000226872.2	2104	13	-13	2239	-13	-2235	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAGCATGGGATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	76361621	76382933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621
ENSMUSG00000022556.12_76361774_76384253_1	chr15	+	1263	10	ISM	ENSMUSG00000022556.12	ENSMUST00000229363.2	1965	11	0	915	0	-915	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTGGTCATCCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	76361773	76384253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147
ENSMUSG00000022556.12_76380169_76384718_1	chr15	+	1292	11	ISM	ENSMUSG00000022556.12	ENSMUST00000072838.6	2018	12	18524	454	18395	-450	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCCTACTTCTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	76380168	76384718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384466_76384537_76384616
ENSMUSG00000022556.12_76381036_76384890_1	chr15	+	1217	9	ISM	ENSMUSG00000022556.12	ENSMUST00000072838.6	2018	12	19391	282	19262	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAGACAAAACAGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	76381035	76384890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384466_76384537_76384616
ENSMUSG00000022556.12_76381132_76384528_1	chr15	+	905	9	ISM	ENSMUSG00000022556.12	ENSMUST00000227478.2	2084	13	19487	644	19358	-640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACTCAGGTGAGAGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	76381131	76384528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466
ENSMUSG00000022556.12_76381834_76385122_1	chr15	+	1309	8	ISM	ENSMUSG00000022556.12	ENSMUST00000072838.6	2018	12	20189	50	20060	-46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGAGTCCCCTTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	76381833	76385122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384466_76384537_76384616
ENSMUSG00000022556.12_76381966_76384718_1	chr15	+	912	8	ISM	ENSMUSG00000022556.12	ENSMUST00000227478.2	2084	13	20321	454	20192	-450	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCCTACTTCTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	76381965	76384718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ENSMUSG00000022556.12_76382436_76384890_1	chr15	+	841	6	ISM	ENSMUSG00000022556.12	ENSMUST00000227478.2	2084	13	20791	282	20662	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAGACAAAACAGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	76382435	76384890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ENSMUSG00000022556.12_76382768_76385170_1	chr15	+	920	5	ISM	ENSMUSG00000022556.12	ENSMUST00000227478.2	2084	13	21123	2	20994	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATACATACATA	NA	NA	NA	NA	NA	NA	NA	NA	76382767	76385170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ENSMUSG00000022557.12_76337189_76338031_1	chr15	-	598	4	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	23446	0	23446	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGCTGGCAGCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	76338031	76337188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016
ENSMUSG00000022557.12_76337525_76338420_1	chr15	-	579	5	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	23057	336	23057	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACCCGAGATCTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	76338420	76337524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377
ENSMUSG00000022557.12_76337708_76338486_1	chr15	-	546	4	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	22991	519	22991	-519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGACGACGGCAGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	76338486	76337707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76337771_76337843_76337929_76338016_76338306_76338377
ENSMUSG00000022557.12_76337888_76338674_1	chr15	-	534	4	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	22803	699	22803	-699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGACCTGGATCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	76338674	76337887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76337929_76338016_76338306_76338377_76338559_76338651
ENSMUSG00000022557.12_76338245_76339247_1	chr15	-	604	6	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	22230	1056	22230	-1056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCACACGCAAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	76339247	76338244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169
ENSMUSG00000022557.12_76338494_76339452_1	chr15	-	556	6	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	22025	1305	22025	-1305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCTGGAAGCCTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	76339452	76338493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407
ENSMUSG00000022557.12_76338709_76339560_1	chr15	-	542	5	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	21917	1520	21917	-1520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCGGAGCATCGCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	76339560	76338708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407
ENSMUSG00000022557.12_76338872_76339797_1	chr15	-	630	5	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	21680	1683	21680	-1683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGAGGTGGGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	76339797	76338871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695
ENSMUSG00000022557.12_76339063_76339907_1	chr15	-	539	5	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	21570	1874	21570	-1874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGGCCAAGAGACCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	76339907	76339062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881
ENSMUSG00000022557.12_76339225_76340086_1	chr15	-	555	5	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	21391	2036	21391	-2036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTTCGAGCGCTGCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	76340086	76339224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071
ENSMUSG00000022557.12_76339315_76340228_1	chr15	-	607	5	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	21249	2126	21249	-2126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGAGCCTGTGGAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	76340228	76339314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071
ENSMUSG00000022557.12_76339416_76350999_1	chr15	-	608	5	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	10478	2227	10478	-2227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGAGGTGGGCCTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	76350999	76339415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971
ENSMUSG00000022557.12_76339551_76359036_1	chr15	-	615	6	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	2441	2362	2441	-2362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTATGACCTGTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	76359036	76339550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947
ENSMUSG00000022557.12_76339941_76361477_1	chr15	-	618	5	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	0	2752	0	-2752	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTACACCGGCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	76361477	76339940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ENSMUSG00000022558.17_76278014_76337049_1	chr15	+	4787	39	NIC	ENSMUSG00000022558.17	novel	4861	39	NA	NA	10	-66	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	826	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCCTGGAGTGCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	76278013	76337049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_+_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ENSMUSG00000022558.17_76278072_76337049_1	chr15	+	4729	39	NIC	ENSMUSG00000022558.17	novel	4861	39	NA	NA	68	-66	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCCTGGAGTGCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	76278071	76337049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_+_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ENSMUSG00000022558.17_76278072_76337049_2	chr15	+	4728	39	NNC	ENSMUSG00000022558.17	novel	4861	39	NA	NA	68	-66	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	395	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCCTGGAGTGCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	76278071	76337049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318883_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ENSMUSG00000022558.17_76278072_76337049_3	chr15	+	4727	39	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	68	-66	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	427	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCCTGGAGTGCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	76278071	76337049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312418_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ENSMUSG00000022558.17_76278072_76337115_1	chr15	+	4787	39	NNC	ENSMUSG00000022558.17	novel	4861	39	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1328	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACTCCTGCGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	76278071	76337115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311314_76311415_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ENSMUSG00000022558.17_76278072_76337115_2	chr15	+	4794	39	NNC	ENSMUSG00000022558.17	novel	4861	39	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1044	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACTCCTGCGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	76278071	76337115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318027_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ENSMUSG00000022558.17_76278072_76337115_3	chr15	+	4794	39	NNC	ENSMUSG00000022558.17	novel	4861	39	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1043	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACTCCTGCGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	76278071	76337115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336447_76336550_76336627_76336694_76337025
ENSMUSG00000022558.17_76278072_76337115_4	chr15	+	4789	39	NNC	ENSMUSG00000022558.17	novel	4861	39	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1043	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACTCCTGCGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	76278071	76337115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318982_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ENSMUSG00000022558.17_76278072_76337115_5	chr15	+	4795	39	NIC	ENSMUSG00000022558.17	novel	4861	39	NA	NA	68	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1672	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACTCCTGCGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	76278071	76337115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_+_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ENSMUSG00000022558.17_76278072_76337115_6	chr15	+	4794	39	NNC	ENSMUSG00000022558.17	novel	4861	39	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1297	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACTCCTGCGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	76278071	76337115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337026
ENSMUSG00000022558.17_76285774_76337115_1	chr15	+	4712	38	NNC	ENSMUSG00000022558.17	novel	4861	39	NA	NA	7770	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACTCCTGCGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	76285773	76337115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336542_76336627_76336694_76337025
ENSMUSG00000022558.17_76285838_76337115_1	chr15	+	4648	38	NNC	ENSMUSG00000022558.17	novel	4861	39	NA	NA	7834	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACTCCTGCGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	76285837	76337115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318890_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ENSMUSG00000022558.17_76285838_76337115_2	chr15	+	4653	38	NNC	ENSMUSG00000022558.17	novel	4861	39	NA	NA	7834	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACTCCTGCGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	76285837	76337115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330718_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ENSMUSG00000022558.17_76285838_76337115_3	chr15	+	4648	38	NNC	ENSMUSG00000022558.17	novel	4861	39	NA	NA	7834	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACTCCTGCGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	76285837	76337115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316356_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ENSMUSG00000022558.17_76285838_76337115_4	chr15	+	4651	38	NNC	ENSMUSG00000022558.17	novel	4861	39	NA	NA	7834	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	326	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACTCCTGCGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	76285837	76337115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314381_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ENSMUSG00000022558.17_76285838_76337115_5	chr15	+	4654	38	NNC	ENSMUSG00000022558.17	novel	4861	39	NA	NA	7834	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACTCCTGCGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	76285837	76337115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336629_76336694_76337025
ENSMUSG00000022558.17_76311763_76317550_1	chr15	+	918	9	ISM	ENSMUSG00000022558.17	ENST00000528919.5	4888	40	33759	19565	33759	-6394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTCCACTTCTTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	76311762	76317550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473
ENSMUSG00000022558.17_76314004_76318943_1	chr15	+	876	9	ISM	ENSMUSG00000022558.17	ENST00000528919.5	4888	40	36000	18172	36000	-5001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCTGCCTGCTGGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	76314003	76318943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882
ENSMUSG00000022558.17_76314412_76320074_1	chr15	+	886	9	ISM	ENSMUSG00000022558.17	ENST00000528919.5	4888	40	36408	17041	36408	-3870	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCTCTACTTGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	76314411	76320074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969
ENSMUSG00000022558.17_76316431_76321490_1	chr15	+	913	10	ISM	ENSMUSG00000022558.17	ENST00000528919.5	4888	40	38427	15625	38427	-2454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAGAGCCTGGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	76316430	76321490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437
ENSMUSG00000022559.9_76420095_76420929_1	chr15	-	473	3	ISM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	2006	174	2006	-174	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAAGCGCGTCTACCGGG	NA	NA	NA	NA	NA	NA	NA	NA	76420929	76420094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76420164_76420424_76420672_76420772
ENSMUSG00000022559.9_76420133_76420992_1	chr15	-	498	3	ISM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	1943	212	1943	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTAACCTGGAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	76420992	76420132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76420164_76420424_76420672_76420772
ENSMUSG00000022559.9_76420538_76421309_1	chr15	-	500	4	ISM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	1626	617	1626	-617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGGACTTGGAACAGGC	NA	NA	NA	NA	NA	NA	NA	NA	76421309	76420537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76420672_76420772_76421005_76421092_76421207_76421289
ENSMUSG00000022559.9_76420598_76421357_1	chr15	-	488	4	ISM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	1578	677	1578	-677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACCCGGAAGTGGTATCA	NA	NA	NA	NA	NA	NA	NA	NA	76421357	76420597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76420672_76420772_76421005_76421092_76421207_76421289
ENSMUSG00000022559.9_76420787_76421529_1	chr15	-	481	4	ISM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	1406	866	1406	-866	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCATGTCAAGGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	76421529	76420786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76421005_76421092_76421207_76421289_76421398_76421488
ENSMUSG00000022559.9_76420955_76422186_1	chr15	-	538	6	ISM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	749	1034	749	-1034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCCCCAGGGACCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	76422186	76420954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116
ENSMUSG00000022559.9_76421358_76422656_1	chr15	-	527	5	ISM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	279	1437	279	-1437	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCCGAATGCGTAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	76422656	76421357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76421398_76421488_76421621_76421922_76421987_76422116_76422276_76422524
ENSMUSG00000022559.9_76421935_76422796_1	chr15	-	483	3	ISM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	139	2014	139	-2014	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTTGGAGGTAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	76422796	76421934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76421987_76422116_76422276_76422524
ENSMUSG00000022560.10_76421913_76425306_1	chr15	+	1629	5	FSM	ENSMUSG00000022560.10	ENST00000532815.2	1653	5	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCAGTGTGGCCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	76421912	76425306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76422124_76423587_76423803_76423893_76424780_76424871_76424996_76425113
ENSMUSG00000022560.10_76423607_76425306_1	chr15	+	890	4	NNC	ENSMUSG00000022560.10	novel	894	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCAGTGTGGCCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	76423606	76425306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76423803_76424400_76424780_76424873_76424996_76425113
ENSMUSG00000022560.10_76423607_76425306_2	chr15	+	892	4	FSM	ENSMUSG00000022560.10	ENST00000526338.7	894	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCAGTGTGGCCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	76423606	76425306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76423803_76424400_76424780_76424871_76424996_76425113
ENSMUSG00000022560.10_76423607_76425306_3	chr15	+	886	4	NNC	ENSMUSG00000022560.10	novel	894	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCAGTGTGGCCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	76423606	76425306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76423803_76424400_76424774_76424871_76424996_76425113
ENSMUSG00000022561.14_76215431_76219108_1	chr15	+	2100	12	NNC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCCCGCTGTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	76215430	76219108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217110_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ENSMUSG00000022561.14_76215431_76219108_10	chr15	+	2105	12	NNC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCCCGCTGTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	76215430	76219108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217803_76217982_76218091_76218213_76218405_76218489_76218661_76218781
ENSMUSG00000022561.14_76215431_76219108_2	chr15	+	2099	12	NNC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCCCGCTGTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	76215430	76219108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76218003_76218091_76218213_76218405_76218489_76218661_76218781
ENSMUSG00000022561.14_76215431_76219108_3	chr15	+	2101	12	NNC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCCCGCTGTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	76215430	76219108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217005_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ENSMUSG00000022561.14_76215431_76219108_4	chr15	+	2103	12	NNC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCCCGCTGTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	76215430	76219108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216914_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ENSMUSG00000022561.14_76215431_76219108_5	chr15	+	2102	12	NNC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCCCGCTGTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	76215430	76219108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217803_76217985_76218091_76218213_76218405_76218489_76218661_76218781
ENSMUSG00000022561.14_76215431_76219108_6	chr15	+	2102	12	NNC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCCCGCTGTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	76215430	76219108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217382_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ENSMUSG00000022561.14_76215431_76219108_7	chr15	+	2100	12	NNC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCCCGCTGTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	76215430	76219108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217566_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ENSMUSG00000022561.14_76215431_76219108_8	chr15	+	2099	12	NNC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCCCGCTGTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	76215430	76219108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76215664_76216104_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ENSMUSG00000022561.14_76215431_76219108_9	chr15	+	2111	12	NNC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCCCGCTGTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	76215430	76219108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217803_76217976_76218091_76218213_76218405_76218489_76218661_76218781
ENSMUSG00000022564.8_76130964_76134104_1	chr15	+	1834	7	FSM	ENSMUSG00000022564.8	ENST00000313269.5	1781	7	-2	-51	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTGCTTCTCCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	76130963	76134104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76131199_76132050_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
ENSMUSG00000022564.8_76130970_76133701_1	chr15	+	1327	7	FSM	ENSMUSG00000022564.8	ENSMUST00000023225.8	1725	7	-5	403	4	-352	multi-exon	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGCAAATACTTAACGTC	NA	NA	NA	NA	NA	NA	NA	NA	76130969	76133701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76131101_76132050_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
ENSMUSG00000022564.8_76131030_76133760_1	chr15	+	1326	7	FSM	ENSMUSG00000022564.8	ENSMUST00000023225.8	1725	7	55	344	55	-293	multi-exon	FALSE	canonical	NA	NA	NA	NA	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCCTTGCCAAGGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	76131029	76133760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76131101_76132050_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
ENSMUSG00000022564.8_76131030_76133812_1	chr15	+	1378	7	FSM	ENSMUSG00000022564.8	ENSMUST00000023225.8	1725	7	55	292	55	-241	multi-exon	FALSE	canonical	NA	NA	NA	NA	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTGTTGCATGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	76131029	76133812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76131101_76132050_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
ENSMUSG00000022570.8_75796532_75800800_1	chr15	-	1049	9	ISM	ENSMUSG00000022570.8	ENSMUST00000229289.2	1223	10	836	7	775	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGACTCAGAAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	75800800	75796531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798973_75800740
ENSMUSG00000022570.8_75796532_75800876_1	chr15	-	1125	9	ISM	ENSMUSG00000022570.8	ENSMUST00000229289.2	1223	10	760	7	699	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGACTCAGAAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	75800876	75796531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798973_75800740
ENSMUSG00000022570.8_75796686_75801602_1	chr15	-	1028	10	FSM	ENSMUSG00000022570.8	ENSMUST00000229289.2	1223	10	34	161	0	-154	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGACCTCTTTGCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	75801602	75796685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798973_75800740_75800899_75801567
ENSMUSG00000022570.8_75798648_75801584_1	chr15	-	493	5	ISM	ENSMUSG00000022570.8	ENSMUST00000230736.2	1319	11	43	2123	-9	-2116	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGCCTCTTGGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	75801584	75798647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
ENSMUSG00000022571.10_75788326_75793409_1	chr15	-	1333	6	NNC	ENSMUSG00000022571.10	novel	1339	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGGACTTTAGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	75793409	75788325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_75788929_75789085_75789179_75790100_75790314_75790521_75790702_75791077_75791137_75793224
ENSMUSG00000022571.10_75788326_75793409_2	chr15	-	1336	6	NNC	ENSMUSG00000022571.10	novel	1339	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGGACTTTAGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	75793409	75788325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_75788922_75789081_75789179_75790100_75790314_75790521_75790702_75791077_75791143_75793224
ENSMUSG00000022574.8_75763007_75764603_1	chr15	-	823	7	ISM	ENSMUSG00000022574.8	ENST00000426292.7	1498	12	1480	0	1480	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	968	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATCCGGTAGGCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	75764603	75763006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75763106_75763234_75763351_75763428_75763532_75763632_75763714_75763811_75763897_75764190_75764332_75764405
ENSMUSG00000022574.8_75763312_75765069_1	chr15	-	762	7	ISM	ENSMUSG00000022574.8	ENST00000426292.7	1498	12	1014	305	1014	-305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGCCCAAGGCTGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	75765069	75763311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75763351_75763428_75763532_75763632_75763714_75763811_75763897_75764190_75764332_75764405_75764603_75764953
ENSMUSG00000022574.8_75763478_75765224_1	chr15	-	744	7	ISM	ENSMUSG00000022574.8	ENST00000426292.7	1498	12	859	471	859	-471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACACTGCCAGGGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	75765224	75763477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75763532_75763632_75763714_75763811_75763897_75764190_75764332_75764405_75764603_75764953_75765070_75765154
ENSMUSG00000022574.8_75763633_75765484_1	chr15	-	834	7	ISM	ENSMUSG00000022574.8	ENST00000426292.7	1498	12	599	626	599	-626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGACAATGTTTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	75765484	75763632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75763714_75763811_75763897_75764190_75764332_75764405_75764603_75764953_75765070_75765154_75765286_75765401
ENSMUSG00000022574.8_75763871_75765605_1	chr15	-	731	7	ISM	ENSMUSG00000022574.8	ENST00000426292.7	1498	12	478	864	478	-864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCATTGCAGTCAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	75765605	75763870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75763897_75764190_75764332_75764405_75764603_75764953_75765070_75765154_75765286_75765401_75765485_75765568
ENSMUSG00000022574.8_75764253_75765925_1	chr15	-	794	7	ISM	ENSMUSG00000022574.8	ENST00000426292.7	1498	12	158	1246	158	-1246	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGTGACCTGCTTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	75765925	75764252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75764332_75764405_75764603_75764953_75765070_75765154_75765286_75765401_75765485_75765568_75765697_75765865
ENSMUSG00000022574.8_75764497_75766038_1	chr15	-	737	6	ISM	ENSMUSG00000022574.8	ENST00000426292.7	1498	12	45	1490	45	-1490	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACCCAGGGGAGCGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	75766038	75764496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75764603_75764953_75765070_75765154_75765286_75765401_75765485_75765568_75765697_75765865
ENSMUSG00000022575.6_75734228_75738505_1	chr15	+	1220	9	ISM	ENSMUSG00000022575.6	ENSMUST00000023238.6	1792	11	52	752	52	-752	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTATCTTCTACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	75734227	75738505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_75734331_75735253_75735478_75736092_75736286_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394
ENSMUSG00000022575.6_75735349_75738911_1	chr15	+	1196	10	ISM	ENSMUSG00000022575.6	ENSMUST00000023238.6	1792	11	1173	346	1173	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGGGGACTGCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	75735348	75738911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_75735478_75736092_75736286_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
ENSMUSG00000022575.6_75736173_75739116_1	chr15	+	1192	9	ISM	ENSMUSG00000022575.6	ENSMUST00000023238.6	1792	11	1997	141	1997	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTCCTACCCTCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	75736172	75739116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_75736286_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
ENSMUSG00000022575.6_75736796_75739257_1	chr15	+	1222	8	ISM	ENSMUSG00000022575.6	ENSMUST00000023238.6	1792	11	2620	0	2620	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTTGAGGGGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	75736795	75739257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
ENSMUSG00000022577.18_75436714_75438481_1	chr15	-	846	4	FSM	ENSMUSG00000022577.18	ENST00000430474.6	797	4	-49	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAAGGGACTGAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	75438481	75436713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_75437191_75437431_75437549_75437980_75438109_75438357
ENSMUSG00000022577.18_75436714_75438481_2	chr15	-	844	4	NNC	ENSMUSG00000022577.18	novel	797	4	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAAGGGACTGAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	75438481	75436713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_75437191_75437431_75437549_75437980_75438109_75438359
ENSMUSG00000022587.15_74826900_74830921_1	chr15	+	1321	5	FSM	ENSMUSG00000022587.15	ENSMUST00000169343.8	2154	5	0	833	0	246	multi-exon	FALSE	canonical	NA	NA	NA	NA	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCACTTGGATTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	74826899	74830921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_74827185_74827331_74827567_74829625_74829727_74830117_74830238_74830341
ENSMUSG00000022587.15_74827013_74830921_1	chr15	+	1208	5	FSM	ENSMUSG00000022587.15	ENSMUST00000169343.8	2154	5	113	833	0	246	multi-exon	FALSE	canonical	NA	NA	NA	NA	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCACTTGGATTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	74827012	74830921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_74827185_74827331_74827567_74829625_74829727_74830117_74830238_74830341
ENSMUSG00000022587.15_74827109_74829671_1	chr15	+	273	3	ISM	ENSMUSG00000022587.15	ENSMUST00000188866.7	2068	5	209	2081	74	-905	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGAGAGTCTTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	74827108	74829671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_74827185_74827415_74827567_74829625
ENSMUSG00000022587.15_74827330_74831180_1	chr15	+	1297	4	FSM	ENSMUSG00000022587.15	ENSMUST00000051698.14	2281	4	410	574	-172	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	74827329	74831180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_74827567_74829625_74829727_74830117_74830238_74830341
ENSMUSG00000022587.15_74827330_74831308_1	chr15	+	1425	4	FSM	ENSMUSG00000022587.15	ENSMUST00000051698.14	2281	4	410	446	-172	128	multi-exon	FALSE	canonical	NA	NA	NA	NA	2291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATGCCATCATAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	74827329	74831308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_74827567_74829625_74829727_74830117_74830238_74830341
ENSMUSG00000022587.15_74827515_74831308_1	chr15	+	1240	4	FSM	ENSMUSG00000022587.15	ENSMUST00000051698.14	2281	4	595	446	13	128	multi-exon	FALSE	canonical	NA	NA	NA	NA	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATGCCATCATAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	74827514	74831308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_74827567_74829625_74829727_74830117_74830238_74830341
ENSMUSG00000022587.15_74827515_74831483_1	chr15	+	1415	4	FSM	ENSMUSG00000022587.15	ENSMUST00000051698.14	2281	4	595	271	13	-269	multi-exon	FALSE	canonical	NA	NA	NA	NA	2043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAAGGCAGGCCCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	74827514	74831483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_74827567_74829625_74829727_74830117_74830238_74830341
ENSMUSG00000022587.15_74830116_74831754_1	chr15	+	1535	2	ISM	ENSMUSG00000022587.15	ENSMUST00000188042.2	714	4	1712	-1079	1712	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCCTTAGACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	74830115	74831754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_74830238_74830341
ENSMUSG00000022589.9_74722859_74725748_1	chr15	-	852	6	ISM	ENSMUSG00000022589.9	ENST00000517471.5	1402	8	2337	48	2337	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCAGCCTTCCTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	74725748	74722858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_74723002_74723543_74723623_74723854_74724022_74724887_74725043_74725312_74725517_74725644
ENSMUSG00000022589.9_74722859_74725782_1	chr15	-	886	6	ISM	ENSMUSG00000022589.9	ENST00000517471.5	1402	8	2303	48	2303	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCAGCCTTCCTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	74725782	74722858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_74723002_74723543_74723623_74723854_74724022_74724887_74725043_74725312_74725517_74725644
ENSMUSG00000022589.9_74722859_74725834_1	chr15	-	938	6	ISM	ENSMUSG00000022589.9	ENST00000517471.5	1402	8	2251	48	2251	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCAGCCTTCCTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	74725834	74722858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_74723002_74723543_74723623_74723854_74724022_74724887_74725043_74725312_74725517_74725644
ENSMUSG00000022589.9_74722975_74727323_1	chr15	-	877	7	ISM	ENSMUSG00000022589.9	ENST00000517471.5	1402	8	762	164	762	-116	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGCAAGAGGATGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	74727323	74722974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_74723002_74723543_74723623_74723854_74724022_74724887_74725043_74725312_74725517_74725644_74725845_74727278
ENSMUSG00000022589.9_74723854_74727870_1	chr15	-	918	6	ISM	ENSMUSG00000022589.9	ENST00000517471.5	1402	8	215	1043	215	-995	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGATGACTGCTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	74727870	74723853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_74724022_74724887_74725043_74725312_74725517_74725644_74725845_74727278_74727435_74727835
ENSMUSG00000022589.9_74724920_74727998_1	chr15	-	846	5	ISM	ENSMUSG00000022589.9	ENST00000517471.5	1402	8	87	2109	87	-2061	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGAGCTCACCGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	74727998	74724919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_74725043_74725312_74725517_74725644_74725845_74727278_74727435_74727835
ENSMUSG00000022594.15_74620532_74623494_1	chr15	-	2848	2	ISM	ENSMUSG00000022594.15	ENSMUST00000023259.15	4023	4	1401	831	1401	-831	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGCAAAGGAGCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	74623494	74620531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_74623277_74623391
ENSMUSG00000022594.15_74620827_74624863_1	chr15	-	2865	4	FSM	ENSMUSG00000022594.15	ENSMUST00000023259.15	4023	4	32	1126	32	-1126	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGCACTGAGGCACGGA	NA	NA	NA	NA	NA	NA	NA	NA	74624863	74620826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_74623277_74623391_74623494_74623703_74623887_74624733
ENSMUSG00000022607.19_73076951_73192686_1	chr15	-	3575	26	ISM	ENSMUSG00000022607.19	ENST00000519419.5	4213	31	39500	-236	22524	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCATTGCCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	73192686	73076950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623
ENSMUSG00000022607.19_73077069_73192969_1	chr15	-	3537	27	ISM	ENSMUSG00000022607.19	ENST00000519419.5	4213	31	39217	-118	22241	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGATTTTGAGAGCATA	NA	NA	NA	NA	NA	NA	NA	NA	73192969	73077068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889
ENSMUSG00000022607.19_73077227_73202735_1	chr15	-	3505	29	ISM	ENSMUSG00000022607.19	ENST00000519419.5	4213	31	29451	40	12475	-40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTATATAATTTATAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	73202735	73077226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697
ENSMUSG00000022607.19_73077290_73202802_1	chr15	-	3509	29	ISM	ENSMUSG00000022607.19	ENST00000519419.5	4213	31	29384	103	12408	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTTGTACCAGAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	73202802	73077289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697
ENSMUSG00000022607.19_73077424_73215051_1	chr15	-	3507	30	ISM	ENSMUSG00000022607.19	ENST00000519419.5	4213	31	17135	237	159	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATGAGTGGTTTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	73215051	73077423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981
ENSMUSG00000022607.19_73077474_73215176_1	chr15	-	3582	30	ISM	ENSMUSG00000022607.19	ENST00000519419.5	4213	31	17010	287	34	-287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATATGCTAATCTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	73215176	73077473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981
ENSMUSG00000022607.19_73077530_73215190_1	chr15	-	3540	30	ISM	ENSMUSG00000022607.19	ENST00000519419.5	4213	31	16996	343	20	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGACCATGGAGACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	73215190	73077529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981
ENSMUSG00000022607.19_73077732_73294927_1	chr15	-	3523	32	FSM	ENSMUSG00000022607.19	ENSMUST00000110036.11	4417	32	113	781	50	-545	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGATTTTGTTATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	73294927	73077731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ENSMUSG00000022607.19_73137978_73232031_1	chr15	-	1680	17	ISM	ENSMUSG00000022607.19	ENST00000519419.5	4213	31	155	60791	155	54106	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGGAGTTGTGCACACT	NA	NA	NA	NA	NA	NA	NA	NA	73232031	73137977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73231874
ENSMUSG00000022610.11_89014787_89018929_1	chr15	-	1155	6	ISM	ENSMUSG00000022610.11	ENSMUST00000088827.8	1808	12	5895	0	5543	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGTGTGGCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	89018929	89014786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89015422_89016697_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814
ENSMUSG00000022610.11_89014951_89019373_1	chr15	-	1039	7	ISM	ENSMUSG00000022610.11	ENSMUST00000088827.8	1808	12	5451	164	5099	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTGAGACGGAATGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	89019373	89014950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89015422_89016697_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325
ENSMUSG00000022610.11_89015241_89024569_1	chr15	-	1099	12	FSM	ENSMUSG00000022610.11	ENSMUST00000088827.8	1808	12	255	454	-97	-454	multi-exon	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTGCCTGGAGCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	89024569	89015240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_89015422_89016697_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019629_89019660_89019779_89019892_89021603_89021663_89024330_89024461_89024550
ENSMUSG00000022610.11_89015347_89024625_1	chr15	-	1049	12	FSM	ENSMUSG00000022610.11	ENSMUST00000088827.8	1808	12	199	560	50	-560	multi-exon	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACGACCTCTGGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	89024625	89015346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_89015422_89016697_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019629_89019660_89019779_89019892_89021603_89021663_89024330_89024461_89024550
ENSMUSG00000022610.11_89015391_89024692_1	chr15	-	1072	12	FSM	ENSMUSG00000022610.11	ENSMUST00000088827.8	1808	12	132	604	-17	-604	multi-exon	FALSE	canonical	NA	NA	NA	NA	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCTAGGCAGCTAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	89024692	89015390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_89015422_89016697_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019629_89019660_89019779_89019892_89021603_89021663_89024330_89024461_89024550
ENSMUSG00000022610.11_89016694_89019373_1	chr15	-	572	6	ISM	ENSMUSG00000022610.11	ENST00000395780.5	884	9	5099	-1	5099	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGGGGTTCCATACAAT	NA	NA	NA	NA	NA	NA	NA	NA	89019373	89016693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325
ENSMUSG00000022610.11_89016744_89024824_1	chr15	-	1127	11	ISM	ENSMUSG00000022610.11	ENSMUST00000088827.8	1808	12	0	1957	0	-49	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGACTCCTTTGATGATGT	NA	NA	NA	NA	NA	NA	NA	NA	89024824	89016743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019629_89019660_89019779_89019892_89021603_89021663_89024330_89024461_89024550
ENSMUSG00000022610.11_89016811_89019845_1	chr15	-	521	7	ISM	ENSMUSG00000022610.11	ENST00000395780.5	884	9	4627	116	4627	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGTTAACCCATCCATACT	NA	NA	NA	NA	NA	NA	NA	NA	89019845	89016810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019779
ENSMUSG00000022610.11_89016956_89021662_1	chr15	-	565	7	ISM	ENSMUSG00000022610.11	ENST00000395780.5	884	9	2810	261	2810	-261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCGCTGGATGGGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	89021662	89016955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019779_89019892_89021603
ENSMUSG00000022610.11_89017103_89024396_1	chr15	-	553	7	ISM	ENSMUSG00000022610.11	ENST00000395780.5	884	9	76	408	76	-408	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGGGAGTGGGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	89024396	89017102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019779_89019892_89021603_89021663_89024330
ENSMUSG00000022610.11_89017332_89024584_1	chr15	-	520	7	ISM	ENSMUSG00000022610.11	ENST00000622558.4	997	10	91	637	91	-637	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCATGGCGGAGATGATTA	NA	NA	NA	NA	NA	NA	NA	NA	89024584	89017331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89017354_89018814_89018930_89019325_89019374_89019779_89019892_89021603_89021663_89024330_89024461_89024550
ENSMUSG00000022610.11_89018852_89024628_1	chr15	-	505	6	ISM	ENSMUSG00000022610.11	ENST00000622558.4	997	10	47	2157	47	-2157	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCATCTTGAATTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	89024628	89018851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89018930_89019325_89019374_89019779_89019892_89021603_89021663_89024330_89024461_89024550
ENSMUSG00000022613.9_89219134_89221052_1	chr15	+	871	9	FSM	ENSMUSG00000022613.9	ENST00000395732.7	830	9	-40	-1	-40	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTCCAATACCCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	89219133	89221052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_89219256_89219480_89219562_89219690_89219854_89220042_89220111_89220217_89220328_89220430_89220499_89220596_89220647_89220732_89220832_89220942
ENSMUSG00000022613.9_89219134_89221052_2	chr15	+	866	9	NNC	ENSMUSG00000022613.9	novel	830	9	NA	NA	-40	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTCCAATACCCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	89219133	89221052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_89219256_89219480_89219562_89219690_89219854_89220042_89220111_89220217_89220328_89220435_89220499_89220596_89220647_89220732_89220832_89220942
ENSMUSG00000022614.9_89235207_89236989_1	chr15	-	1445	5	ISM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	2873	0	2676	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTGCGGTGTGGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	89236989	89235206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806
ENSMUSG00000022614.9_89235351_89237305_1	chr15	-	1467	7	ISM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	2557	144	2360	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACCCATTTACTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	89237305	89235350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236
ENSMUSG00000022614.9_89235716_89238092_1	chr15	-	1477	10	ISM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	1770	509	1573	-23	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCAGCCACTGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	89238092	89235715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031
ENSMUSG00000022614.9_89235964_89238305_1	chr15	-	1367	11	ISM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	1557	757	1360	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCCGAGTTGTGCAGACC	NA	NA	NA	NA	NA	NA	NA	NA	89238305	89235963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285
ENSMUSG00000022614.9_89236008_89238364_1	chr15	-	1382	11	ISM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	1498	801	1301	-315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTCCCATCCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	89238364	89236007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285
ENSMUSG00000022614.9_89236052_89238424_1	chr15	-	1398	11	ISM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	1438	845	1241	-359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCTCAGACACTGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	89238424	89236051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285
ENSMUSG00000022614.9_89236405_89238825_1	chr15	-	1371	10	NNC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	840	-712	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGGCCCAGCGCTATAAG	NA	NA	NA	NA	NA	NA	NA	NA	89238825	89236404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238520_89238762
ENSMUSG00000022614.9_89236414_89238832_1	chr15	-	1375	11	ISM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	1030	1207	833	-721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTACCTGCGGGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	89238832	89236413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766
ENSMUSG00000022614.9_89236445_89238916_1	chr15	-	1428	11	ISM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	946	1238	749	-752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCAACTACCCCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	89238916	89236444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766
ENSMUSG00000022614.9_89236454_89238890_1	chr15	-	1387	10	NNC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	775	-761	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCCATGTTGCCAACTA	NA	NA	NA	NA	NA	NA	NA	NA	89238890	89236453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238520_89238762
ENSMUSG00000022614.9_89236657_89238967_1	chr15	-	1361	10	ISM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	895	1450	698	-964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGCAGATGTGGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	89238967	89236656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766
ENSMUSG00000022614.9_89236806_89239588_1	chr15	-	1371	10	ISM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	274	1599	77	-1113	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCCTCCCAAATGATAC	NA	NA	NA	NA	NA	NA	NA	NA	89239588	89236805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558
ENSMUSG00000022614.9_89236838_89239623_1	chr15	-	1368	9	NNC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	42	-1145	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGCAGCTATGACGGAC	NA	NA	NA	NA	NA	NA	NA	NA	89239623	89236837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238520_89238762_89239021_89239558
ENSMUSG00000022614.9_89236860_89239637_1	chr15	-	1366	10	ISM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	225	1653	28	-1167	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGCGGCCGGAAGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	89239637	89236859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558
ENSMUSG00000022614.9_89236926_89239777_1	chr15	-	1440	10	ISM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	85	1719	85	-1233	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTTCTGTGGAGCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	89239777	89236925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558
ENSMUSG00000022614.9_89236957_89239777_1	chr15	-	1403	9	NNC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	85	-1264	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGTCTCTGGACTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	89239777	89236956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238520_89238762_89239021_89239558
ENSMUSG00000022615.8_89255968_89258310_1	chr15	-	877	2	FSM	ENSMUSG00000091780.4	ENST00000543927.6	986	2	35	74	35	-74	multi-exon	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGGTCGCAGCAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	89258310	89255967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_89256669_89258134
ENSMUSG00000022615.8_89256134_89258230_1	chr15	-	631	2	FSM	ENSMUSG00000091780.4	ENST00000543927.6	986	2	115	240	115	-240	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAAGACTGTTAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	89258230	89256133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_89256669_89258134
ENSMUSG00000022617.16_89310563_89313360_1	chr15	-	1191	10	ISM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	742	-7	742	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGACTTAAGTGACATTC	NA	NA	NA	NA	NA	NA	NA	NA	89313360	89310562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251
ENSMUSG00000022617.16_89310671_89313645_1	chr15	-	1149	11	FSM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	457	101	457	-101	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGACCTCTGTAGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	89313645	89310670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251_89313361_89313579
ENSMUSG00000022617.16_89311070_89313899_1	chr15	-	1153	10	ISM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	203	500	203	-500	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTCTGTGGTCCACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	89313899	89311069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251_89313361_89313579
ENSMUSG00000022617.16_89311838_89314063_1	chr15	-	1113	8	ISM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	39	1268	39	-1268	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGATTATACTTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	89314063	89311837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251_89313361_89313579
ENSMUSG00000022621.17_89466740_89468176_1	chr15	-	1042	3	ISM	ENSMUSG00000022621.17	ENSMUST00000094056.12	1322	6	7891	0	6412	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACACTAAGGGTCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	89468176	89466739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89467634_89467801_89467886_89468112
ENSMUSG00000022621.17_89466880_89468520_1	chr15	-	975	4	ISM	ENSMUSG00000022621.17	ENSMUST00000023294.15	1640	9	7606	144	6068	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGCAGCAGACAGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	89468520	89466879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89467634_89467801_89467886_89468112_89468211_89468481
ENSMUSG00000022621.17_89467112_89471176_1	chr15	-	956	6	ISM	ENSMUSG00000022621.17	ENSMUST00000023294.15	1640	9	4950	376	3412	-372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATTAATTCCAAATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	89471176	89467111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89467634_89467801_89467886_89468112_89468211_89468481_89468594_89470461_89470542_89471116
ENSMUSG00000022621.17_89467244_89474602_1	chr15	-	1001	8	ISM	ENSMUSG00000022621.17	ENSMUST00000023294.15	1640	9	1524	508	-14	-504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCAAACTGACCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	89474602	89467243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89467634_89467801_89467886_89468112_89468211_89468481_89468594_89470461_89470542_89471116_89471197_89472390_89472421_89474475
ENSMUSG00000022621.17_89467374_89476090_1	chr15	-	966	9	FSM	ENSMUSG00000022621.17	ENSMUST00000023294.15	1640	9	36	638	-23	428	multi-exon	FALSE	canonical	NA	NA	NA	NA	1911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGATGAGGGATCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	89476090	89467373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_89467634_89467801_89467886_89468112_89468211_89468481_89468594_89470461_89470542_89471116_89471197_89472390_89472421_89474475_89474630_89476022
ENSMUSG00000022621.17_89467847_89474602_1	chr15	-	372	4	NNC	ENSMUSG00000022621.17	novel	405	5	NA	NA	-14	-45	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTCCCAGGACTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	89474602	89467846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_89467886_89468112_89468211_89471116_89471225_89474475
ENSMUSG00000022621.17_89467847_89474602_2	chr15	-	566	7	ISM	ENSMUSG00000022621.17	ENSMUST00000023294.15	1640	9	1524	1111	-14	-45	internal_fragment	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTCCCAGGACTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	89474602	89467846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89467886_89468112_89468211_89468481_89468594_89470461_89470542_89471116_89471197_89472390_89472421_89474475
ENSMUSG00000022621.17_89467847_89474602_3	chr15	-	368	5	NNC	ENSMUSG00000022621.17	novel	405	5	NA	NA	-14	-45	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTCCCAGGACTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	89474602	89467846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_89467886_89468112_89468211_89471116_89471197_89472390_89472421_89474481
ENSMUSG00000022621.17_89467847_89474602_4	chr15	-	374	5	FSM	ENSMUSG00000022621.17	ENST00000376439.3	405	5	-14	45	-14	-45	multi-exon	FALSE	canonical	NA	NA	NA	NA	1738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTCCCAGGACTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	89474602	89467846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_89467886_89468112_89468211_89471116_89471197_89472390_89472421_89474475
ENSMUSG00000022621.17_89467847_89474602_5	chr15	-	373	5	NNC	ENSMUSG00000022621.17	novel	405	5	NA	NA	-14	-45	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTCCCAGGACTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	89474602	89467846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_89467886_89468112_89468211_89471116_89471197_89472391_89472421_89474475
ENSMUSG00000022621.17_89468113_89474602_3	chr15	-	331	4	NNC	ENSMUSG00000022621.17	novel	405	5	NA	NA	-14	-311	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGCAGCCCTGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	89474602	89468112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_89468211_89471120_89471197_89472390_89472421_89474475
ENSMUSG00000022634.10_93183139_93234264_1	chr15	-	562	3	ISM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	425	980	425	-980	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGATTTATTAGATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	93234264	93183138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_93183504_93184290_93184444_93234220
ENSMUSG00000022634.10_93183267_93234689_1	chr15	-	568	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	0	1108	0	-1108	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGCTCCACTTAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	93234689	93183266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
ENSMUSG00000022639.15_50540226_50548331_1	chr16	-	886	3	ISM	ENSMUSG00000022639.15	ENSMUST00000186944.7	2052	4	4805	569	4715	-564	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGAAGCTAGTCACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	50548331	50540225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_50540910_50547236_50547362_50548254
ENSMUSG00000022639.15_50540775_50553051_1	chr16	-	849	4	FSM	ENSMUSG00000022639.15	ENSMUST00000186944.7	2052	4	85	1118	-5	-1113	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGTTTCAGAGTTAACA	NA	NA	NA	NA	NA	NA	NA	NA	50553051	50540774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_50540910_50547236_50547362_50548254_50548573_50552780
ENSMUSG00000022641.16_50020833_50040828_1	chr16	-	401	4	ISM	ENSMUSG00000022641.16	ENSMUST00000114488.8	3293	15	110528	3311	110528	-3311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGCGTTCTTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	50040828	50020832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_50020955_50022740_50022939_50029447_50029508_50040807
ENSMUSG00000022641.16_50020887_50040890_1	chr16	-	409	4	ISM	ENSMUSG00000022641.16	ENSMUST00000114488.8	3293	15	110466	3365	110466	-3365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCACACAGCACGGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	50040890	50020886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_50020955_50022740_50022939_50029447_50029508_50040807
ENSMUSG00000022641.16_50022771_50043649_1	chr16	-	414	4	ISM	ENSMUSG00000022641.16	ENSMUST00000114488.8	3293	15	107707	5249	107707	-5249	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGAGTATCACCAGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	50043649	50022770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_50022939_50029447_50029508_50040807_50040957_50043612
ENSMUSG00000022641.16_50022851_50043672_1	chr16	-	357	4	ISM	ENSMUSG00000022641.16	ENSMUST00000114488.8	3293	15	107684	5329	107684	-5329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGAACCTTTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	50043672	50022850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_50022939_50029447_50029508_50040807_50040957_50043612
ENSMUSG00000022641.16_50022887_50043741_1	chr16	-	390	4	ISM	ENSMUSG00000022641.16	ENSMUST00000114488.8	3293	15	107615	5365	107615	-5365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCTATCCATTCCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	50043741	50022886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_50022939_50029447_50029508_50040807_50040957_50043612
ENSMUSG00000022641.16_50029465_50044712_1	chr16	-	390	4	ISM	ENSMUSG00000022641.16	ENSMUST00000114488.8	3293	15	106644	11943	106644	-11943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCACCCTACAGAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	50044712	50029464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_50029508_50040807_50040957_50043612_50043749_50044650
ENSMUSG00000022641.16_50095080_50151356_1	chr16	-	404	3	ISM	ENSMUSG00000022641.16	ENSMUST00000114488.8	3293	15	0	77558	0	-77558	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCCGGAGACCAATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	50151356	50095079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_50095153_50100731_50100903_50151196
ENSMUSG00000022641.16_50095138_50151400_1	chr16	-	390	3	ISM	ENSMUSG00000022641.16	ENSMUST00000114488.8	3293	15	-44	77616	-44	-77616	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGATGGCCTAGAGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	50151400	50095137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_50095153_50100731_50100903_50151196
ENSMUSG00000022641.16_50100850_50184447_1	chr16	-	386	3	ISM	ENSMUSG00000022641.16	ENST00000406780.5	3669	16	203	83328	203	-83328	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGGACGGAAAACGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	50184447	50100849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_50100903_50151196_50151466_50184383
ENSMUSG00000022652.8_48257638_48269755_1	chr16	+	249	3	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	5917	109103	5917	-109103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAATTGTTTTTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	48257637	48269755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48257705_48266653_48266745_48269664
ENSMUSG00000022652.8_48269684_48272855_1	chr16	+	242	3	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	17963	106003	17963	-106003	internal_fragment	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTCTTCACAGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	48269683	48272855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48269756_48270362_48270472_48272794
ENSMUSG00000022652.8_48270420_48281065_1	chr16	+	235	3	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	18699	97793	18699	-97793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAAGCTGCTGCTTAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	48270419	48281065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48270472_48272794_48272955_48281042
ENSMUSG00000022652.8_48272832_48300214_1	chr16	+	253	3	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	21111	78644	21111	-78644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTACACAGCTGTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	48272831	48300214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48272955_48281042_48281149_48300190
ENSMUSG00000022652.8_48272912_48300238_1	chr16	+	197	3	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	21191	78620	21191	-78620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACCCCGGATGAAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	48272911	48300238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48272955_48281042_48281149_48300190
ENSMUSG00000022652.8_48300296_48322691_1	chr16	+	196	4	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	48575	56167	48575	-56167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGTGGACACAAAGCATAA	NA	NA	NA	NA	NA	NA	NA	NA	48300295	48322691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48300317_48319109_48319190_48320456_48320528_48322667
ENSMUSG00000022652.8_48319105_48322732_1	chr16	+	221	3	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	67384	56126	67384	-56126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGCTGCGGCTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	48319104	48322732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48319190_48320456_48320528_48322667
ENSMUSG00000022652.8_48319159_48330629_1	chr16	+	237	4	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	67438	48229	67438	-48229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTCATTTACAGTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	48319158	48330629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48319190_48320456_48320528_48322667_48322733_48330559
ENSMUSG00000022652.8_48330558_48335029_1	chr16	+	227	2	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	78837	43829	78837	-43829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCCAAGAATACAATCATC	NA	NA	NA	NA	NA	NA	NA	NA	48330557	48335029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48330704_48334948
ENSMUSG00000022661.15_45202546_45215035_1	chr16	-	1499	3	ISM	ENSMUSG00000022661.15	ENSMUST00000163230.8	2347	6	14381	48	14203	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTGATGTGGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	45215035	45202545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45203821_45212607_45212752_45214955
ENSMUSG00000022661.15_45202722_45215135_1	chr16	-	1423	3	ISM	ENSMUSG00000022661.15	ENSMUST00000163230.8	2347	6	14281	224	14103	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGTATCTTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	45215135	45202721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45203821_45212607_45212752_45214955
ENSMUSG00000022661.15_45202790_45215180_1	chr16	-	1400	3	ISM	ENSMUSG00000022661.15	ENSMUST00000163230.8	2347	6	14236	292	14058	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCGCTTTGTTCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	45215180	45202789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45203821_45212607_45212752_45214955
ENSMUSG00000022661.15_45203073_45217658_1	chr16	-	1492	4	ISM	ENSMUSG00000022661.15	ENSMUST00000163230.8	2347	6	11758	575	11580	-527	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAGCACTTAGGCAATA	NA	NA	NA	NA	NA	NA	NA	NA	45217658	45203072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45203821_45212607_45212752_45214955_45215229_45217331
ENSMUSG00000022661.15_45203280_45229227_1	chr16	-	1376	6	FSM	ENSMUSG00000022661.15	ENSMUST00000163230.8	2347	6	189	782	11	-734	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCTTAGGTCCGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	45229227	45203279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_45203821_45212607_45212752_45214955_45215229_45217331_45217659_45220584_45220667_45229218
ENSMUSG00000022661.15_45203280_45229335_1	chr16	-	1484	6	FSM	ENSMUSG00000022661.15	ENSMUST00000163230.8	2347	6	81	782	81	-734	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCTTAGGTCCGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	45229335	45203279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_45203821_45212607_45212752_45214955_45215229_45217331_45217659_45220584_45220667_45229218
ENSMUSG00000022663.4_44979148_45004172_1	chr16	+	1109	10	ISM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	0	4729	0	-4729	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGGTGTATATGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44979147	45004172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044
ENSMUSG00000022663.4_44979358_45008093_1	chr16	+	1039	12	FSM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	210	808	210	-808	multi-exon	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAATGTAGTGGAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	44979357	45008093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
ENSMUSG00000022663.4_44979402_45008154_1	chr16	+	1056	12	FSM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	254	747	254	-747	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATACATAGCTGTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	44979401	45008154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
ENSMUSG00000022663.4_44979449_45008257_1	chr16	+	1112	12	FSM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	301	644	301	-644	multi-exon	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTATTTGTTTAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	44979448	45008257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
ENSMUSG00000022663.4_44990228_45008443_1	chr16	+	1121	9	ISM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	11080	458	11080	-458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGTCCTCTCCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	44990227	45008443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
ENSMUSG00000022663.4_44998602_45008629_1	chr16	+	1056	5	NNC	ENSMUSG00000022663.4	novel	2057	12	NA	NA	19454	-272	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGGGAATCTTTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	44998601	45008629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_44998675_45003160_45003340_45004044_45004173_45006528_45006598_45008022
ENSMUSG00000022663.4_44998608_45008619_1	chr16	+	1052	6	ISM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	19460	282	19460	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGGGACTTGAAGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	44998607	45008619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
ENSMUSG00000022663.4_44998652_45008694_1	chr16	+	1083	6	ISM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	19504	207	19504	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTCTGAAACATACTTT	NA	NA	NA	NA	NA	NA	NA	NA	44998651	45008694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
ENSMUSG00000022663.4_45003239_45008733_1	chr16	+	1009	4	ISM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	24091	168	24091	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTTTGGTTTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	45003238	45008733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_45003340_45004044_45004173_45006528_45006598_45008022
ENSMUSG00000022663.4_45004043_45008902_1	chr16	+	1079	3	ISM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	24895	-1	24895	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACATATGCCACATATAT	NA	NA	NA	NA	NA	NA	NA	NA	45004042	45008902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_45004173_45006528_45006598_45008022
ENSMUSG00000022664.12_44962516_44964145_1	chr16	-	220	2	NNC	ENSMUSG00000022664.12	novel	865	4	NA	NA	14401	-13	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	138	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAATGGTACCTGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	44964145	44962515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_44962576_44963985
ENSMUSG00000022664.12_44962526_44964126_1	chr16	-	193	2	ISM	ENSMUSG00000022664.12	ENST00000492406.6	1414	7	14734	23	14420	-23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACGACACTTTATAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	44964126	44962525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44962576_44963983
ENSMUSG00000022664.12_44962546_44964211_1	chr16	-	258	2	ISM	ENSMUSG00000022664.12	ENST00000492406.6	1414	7	14649	43	14335	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAGAGTGATGACTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	44964211	44962545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44962576_44963983
ENSMUSG00000022664.12_44964390_44978816_1	chr16	-	934	6	ISM	ENSMUSG00000022664.12	ENSMUST00000023344.10	4233	7	253	4454	44	163	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAAGCTTTATTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	44978816	44964389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44964765_44967630_44967699_44971815_44971950_44972939_44973039_44977823_44978010_44978744
ENSMUSG00000022664.12_44964726_44971949_1	chr16	-	241	3	ISM	ENSMUSG00000022664.12	ENST00000492406.6	1414	7	6911	2223	6597	-173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTCTTGTCTATCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	44971949	44964725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44964765_44967630_44967699_44971815
ENSMUSG00000022664.12_44971815_44973040_1	chr16	-	233	2	ISM	ENSMUSG00000022664.12	ENST00000492406.6	1414	7	5820	9312	5506	-7262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTAGCAGTGTAACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	44973040	44971814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44971947_44972939
ENSMUSG00000022665.16_44914148_44914609_1	chr16	+	303	2	ISM	ENSMUSG00000022665.16	ENSMUST00000099498.10	4083	9	173	33831	173	-33678	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGTAAAAGACACAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	44914147	44914609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_44914233_44914391
ENSMUSG00000022665.16_44916868_44924796_1	chr16	+	307	2	ISM	ENSMUSG00000022665.16	ENSMUST00000061050.6	3648	8	2452	23491	2452	-23491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGGAGAGCTTCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	44916867	44924796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_44917121_44924742
ENSMUSG00000022665.16_44917001_44936630_1	chr16	+	299	3	ISM	ENSMUSG00000022665.16	ENSMUST00000061050.6	3648	8	2585	11657	2585	-11657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGATGATGATGACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	44917000	44936630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_44917121_44924742_44924900_44936608
ENSMUSG00000022665.16_44924764_44938497_1	chr16	+	307	3	ISM	ENSMUSG00000022665.16	ENSMUST00000061050.6	3648	8	10348	9790	10348	-9790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGATCTTATTGACACT	NA	NA	NA	NA	NA	NA	NA	NA	44924763	44938497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_44924900_44936608_44936746_44938463
ENSMUSG00000022665.16_44924823_44938554_1	chr16	+	305	3	ISM	ENSMUSG00000022665.16	ENSMUST00000061050.6	3648	8	10407	9733	10407	-9733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGGCATTGCCTGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	44924822	44938554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_44924900_44936608_44936746_44938463
ENSMUSG00000022665.16_44936655_44943271_1	chr16	+	302	3	ISM	ENSMUSG00000022665.16	ENSMUST00000061050.6	3648	8	22239	5016	22239	-5016	internal_fragment	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAACAGCTCTCTGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	44936654	44943271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_44936746_44938463_44938613_44943209
ENSMUSG00000022665.16_44938542_44947578_1	chr16	+	308	4	ISM	ENSMUSG00000022665.16	ENSMUST00000061050.6	3648	8	24126	709	24126	-709	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCAACTATTTTCAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	44938541	44947578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_44938613_44943209_44943314_44946484_44946566_44947526
ENSMUSG00000022665.16_44943248_44947687_1	chr16	+	308	3	ISM	ENSMUSG00000022665.16	ENSMUST00000061050.6	3648	8	28832	600	28832	-600	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGACTTAATTGATTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	44943247	44947687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_44943314_44946484_44946566_44947526
ENSMUSG00000022668.11_44558752_44560465_1	chr16	-	1054	2	ISM	ENSMUSG00000022668.11	ENST00000383677.7	773	5	6154	-815	6154	753	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAACCCAATTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	44560465	44558751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44559732_44560391
ENSMUSG00000022668.11_44558862_44562924_1	chr16	-	1047	3	ISM	ENSMUSG00000022668.11	ENST00000383677.7	773	5	3695	-705	3695	643	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGAGCTTTGACTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	44562924	44558861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44559732_44560391_44560511_44562866
ENSMUSG00000022668.11_44559100_44565837_1	chr16	-	1062	5	ISM	ENSMUSG00000022668.11	ENSMUST00000023348.11	836	6	885	-405	782	405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGACTATCGGCACCTTA	NA	NA	NA	NA	NA	NA	NA	NA	44565837	44559099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757
ENSMUSG00000022668.11_44559343_44566646_1	chr16	-	1123	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	80	2212	-27	162	multi-exon	FALSE	canonical	NA	NA	NA	NA	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTACTGTCTTCAATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	44566646	44559342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
ENSMUSG00000022668.11_44559378_44566646_1	chr16	-	1088	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	80	2247	-27	127	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTTGGATAAGTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	44566646	44559377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
ENSMUSG00000022668.11_44559505_44566685_1	chr16	-	1000	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	41	2374	37	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTAAGGGTTACAAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	44566685	44559504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
ENSMUSG00000022668.11_44559628_44566646_1	chr16	-	732	5	NNC	ENSMUSG00000022668.11	novel	773	5	NA	NA	-27	-61	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGACAACTGGAGTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	44566646	44559627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_44559732_44560391_44560511_44562866_44562960_44564100_44564232_44566361
ENSMUSG00000022668.11_44559628_44566646_2	chr16	-	734	5	NNC	ENSMUSG00000022668.11	novel	773	5	NA	NA	-27	-61	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGACAACTGGAGTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	44566646	44559627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_44559727_44560391_44560511_44562866_44562967_44564100_44564232_44566361
ENSMUSG00000022671.14_15666307_15680746_1	chr16	-	568	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	465	2	428	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	15680746	15666306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_15666594_15680261_15680408_15680611
ENSMUSG00000022671.14_15680261_15681174_1	chr16	-	710	2	ISM	ENSMUSG00000022671.14	ENSMUST00000229680.2	1066	4	0	13951	0	-13947	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGATGGGCTGGGTACT	NA	NA	NA	NA	NA	NA	NA	NA	15681174	15680260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15680408_15680611
ENSMUSG00000022673.6_15442237_15443443_1	chr16	-	415	2	ISM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	11821	476	11607	304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAAGAGTACCATGCATG	NA	NA	NA	NA	NA	NA	NA	NA	15443443	15442236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15442634_15443425
ENSMUSG00000022673.6_15442293_15443498_1	chr16	-	414	2	ISM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	11766	532	11552	248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTTTTTTTAATGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	15443498	15442292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15442634_15443425
ENSMUSG00000022673.6_15442349_15443551_1	chr16	-	411	2	ISM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	11713	588	11499	192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGCAGCTTGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	15443551	15442348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15442634_15443425
ENSMUSG00000022673.6_15442541_15444128_1	chr16	-	456	3	ISM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	11136	780	10922	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCATGGCCCTCGGACTA	NA	NA	NA	NA	NA	NA	NA	NA	15444128	15442540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15442634_15443425_15443560_15443899
ENSMUSG00000022673.6_15442541_15450203_1	chr16	-	1399	7	ISM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	4847	0	4847	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCATGGCCCTCGGACTA	NA	NA	NA	NA	NA	NA	NA	NA	15450203	15442540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15442634_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980
ENSMUSG00000022673.6_15443462_15445613_1	chr16	-	428	3	ISM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	9651	1701	9437	-921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTTTGAGGATATTCG	NA	NA	NA	NA	NA	NA	NA	NA	15445613	15443461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15443560_15443899_15444129_15445512
ENSMUSG00000022673.6_15443523_15445673_1	chr16	-	427	3	ISM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	9591	1762	9377	-982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTGAAGCATTGAGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	15445673	15443522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15443560_15443899_15444129_15445512
ENSMUSG00000022673.6_15444104_15447220_1	chr16	-	416	4	ISM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	8044	2343	7830	-1563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAGCCGGGGGATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	15447220	15444103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15444129_15445512_15445721_15446456_15446585_15447165
ENSMUSG00000022673.6_15445512_15452441_1	chr16	-	1444	7	ISM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	2609	2971	2609	-2971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCAGGCTTATGAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	15452441	15445511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302
ENSMUSG00000022673.6_15445665_15452969_1	chr16	-	1348	8	ISM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	2081	3124	2081	-3124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCATCACCTGGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	15452969	15445664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912
ENSMUSG00000022673.6_15446455_15453189_1	chr16	-	1429	8	ISM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	1861	3914	1861	-3914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAAAACATTTTTATATAA	NA	NA	NA	NA	NA	NA	NA	NA	15453189	15446454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093
ENSMUSG00000022673.6_15447165_15453958_1	chr16	-	1402	8	ISM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	1092	4624	1092	-4624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTGATGTCCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	15453958	15447164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856
ENSMUSG00000022673.6_15447286_15454122_1	chr16	-	1354	9	ISM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	928	4745	928	-4745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCCTCGTCCTGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	15454122	15447285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049
ENSMUSG00000022673.6_15447411_15454502_1	chr16	-	1338	10	ISM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	548	4870	548	-4870	internal_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTACAGTATGTGTACAAC	NA	NA	NA	NA	NA	NA	NA	NA	15454502	15447410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484
ENSMUSG00000022673.6_15447456_15454567_1	chr16	-	1358	10	ISM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	483	4915	483	-4915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACATCCTTCTGTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	15454567	15447455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484
ENSMUSG00000022673.6_15447515_15454615_1	chr16	-	1347	10	ISM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	435	4974	435	-4974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGTGGAACAAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	15454615	15447514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484
ENSMUSG00000022673.6_15448187_15455019_1	chr16	-	1344	10	ISM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	31	5646	31	-5646	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGAGCGGCTTGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	15455019	15448186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ENSMUSG00000022673.6_15453908_15455036_1	chr16	-	439	4	ISM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	14	11367	14	-11367	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTTGGGGAACAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	15455036	15453907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15453959_15454049_15454214_15454484_15454647_15454974
ENSMUSG00000022674.16_15370541_15412371_1	chr16	-	4182	4	NNC	ENSMUSG00000022674.16	novel	4207	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTTGTGTGTGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	15412371	15370540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_15374408_15394886_15395005_15398922_15399072_15412323
ENSMUSG00000022674.16_15373745_15399073_1	chr16	-	814	2	ISM	ENSMUSG00000022674.16	ENSMUST00000118236.8	893	4	13263	0	13263	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTGTTGGGGTTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	15399073	15373744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15374408_15398922
ENSMUSG00000022676.8_14523716_14526733_1	chr16	+	1505	3	FSM	ENSMUSG00000022676.8	ENSMUST00000023356.8	2021	3	0	516	0	-516	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTACCTACAATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	14523715	14526733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_14523917_14524574_14525124_14525978
ENSMUSG00000022676.8_14523822_14526786_1	chr16	+	1452	3	FSM	ENSMUSG00000022676.8	ENSMUST00000023356.8	2021	3	106	463	106	-463	multi-exon	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAGAAAAAGAACAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	14523821	14526786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_14523917_14524574_14525124_14525978
ENSMUSG00000022676.8_14523875_14526837_1	chr16	+	1450	3	FSM	ENSMUSG00000022676.8	ENSMUST00000023356.8	2021	3	159	412	159	-412	multi-exon	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCCATGTGTGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	14523874	14526837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_14523917_14524574_14525124_14525978
ENSMUSG00000022676.8_14524837_14527249_1	chr16	+	1558	2	ISM	ENSMUSG00000022676.8	ENSMUST00000023356.8	2021	3	1121	0	1121	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTACTCATATACTATT	NA	NA	NA	NA	NA	NA	NA	NA	14524836	14527249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_14525124_14525978
ENSMUSG00000022676.8_14524837_14527249_2	chr16	+	1556	2	NNC	ENSMUSG00000022676.8	novel	2021	3	NA	NA	1121	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTACTCATATACTATT	NA	NA	NA	NA	NA	NA	NA	NA	14524836	14527249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_14525124_14525980
ENSMUSG00000022677.16_14117108_14128995_1	chr16	-	1185	3	ISM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	6244	0	6201	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTATGGTCATGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	14128995	14117107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_14118074_14122317_14122452_14128910
ENSMUSG00000022677.16_14117306_14135196_1	chr16	-	1224	5	FSM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	43	198	0	-198	multi-exon	FALSE	canonical	NA	NA	NA	NA	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTCCAGCCCACAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	14135196	14117305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679_14131878_14135157
ENSMUSG00000022677.16_14122413_14135196_1	chr16	-	162	3	NNC	ENSMUSG00000022677.16	novel	163	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1048	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCAGATGGAGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	14135196	14122412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_14122452_14128910_14128996_14135158
ENSMUSG00000022677.16_14122413_14135196_2	chr16	-	163	3	FSM	ENSMUSG00000022677.16	ENST00000575744.5	163	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCAGATGGAGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	14135196	14122412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_14122452_14128910_14128996_14135157
ENSMUSG00000022678.17_13981139_14010285_1	chr16	+	1775	9	NNC	ENSMUSG00000022678.17	novel	2287	9	NA	NA	0	-407	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGAACAGAACTTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	13981138	14010285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_13981233_13987315_13987440_13988206_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ENSMUSG00000022678.17_13981139_14010285_2	chr16	+	1780	9	FSM	ENSMUSG00000022678.17	ENSMUST00000023359.13	2287	9	0	507	0	-407	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGAACAGAACTTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	13981138	14010285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ENSMUSG00000022678.17_13981139_14010285_3	chr16	+	1775	9	NNC	ENSMUSG00000022678.17	novel	2287	9	NA	NA	0	-407	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGAACAGAACTTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	13981138	14010285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009586
ENSMUSG00000022678.17_13987315_14010285_1	chr16	+	1815	8	ISM	ENSMUSG00000022678.17	ENSMUST00000115795.9	2335	9	6106	497	6106	-407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGAACAGAACTTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	13987314	14010285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009453
ENSMUSG00000022678.17_13987315_14010393_1	chr16	+	1795	8	ISM	ENSMUSG00000022678.17	ENSMUST00000023359.13	2287	9	6176	399	6106	-299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGACCAGCACAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	13987314	14010393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ENSMUSG00000022678.17_13987315_14010393_2	chr16	+	1790	8	NNC	ENSMUSG00000022678.17	novel	2287	9	NA	NA	6106	-299	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGACCAGCACAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	13987314	14010393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_13987440_13988206_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ENSMUSG00000022678.17_13987315_14010393_4	chr16	+	1790	8	NNC	ENSMUSG00000022678.17	novel	2287	9	NA	NA	6106	-299	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGACCAGCACAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	13987314	14010393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009586
ENSMUSG00000022678.17_13993153_14010561_1	chr16	+	1681	6	NNC	ENSMUSG00000022678.17	novel	2287	9	NA	NA	11944	-131	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGACCTAGAACTTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	13993152	14010561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009586
ENSMUSG00000022678.17_13993153_14010700_1	chr16	+	1825	6	ISM	ENSMUSG00000022678.17	ENSMUST00000023359.13	2287	9	12014	92	11944	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGCTCAATAGATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	13993152	14010700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ENSMUSG00000022678.17_13993189_14010589_1	chr16	+	1806	6	ISM	ENSMUSG00000022678.17	ENSMUST00000115795.9	2335	9	11980	193	11980	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATTACAAGGTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	13993188	14010589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009453
ENSMUSG00000022678.17_13993246_14010703_1	chr16	+	1730	6	NNC	ENSMUSG00000022678.17	novel	2287	9	NA	NA	12037	11	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCAATAGATGTGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	13993245	14010703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009586
ENSMUSG00000022678.17_14003556_14010792_1	chr16	+	1759	4	ISM	ENSMUSG00000022678.17	ENSMUST00000115795.9	2335	9	22347	-10	22347	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTGCATTGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	14003555	14010792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_14003738_14006176_14006269_14007950_14008097_14009453
ENSMUSG00000022680.15_13651695_13654322_1	chr16	-	1089	2	ISM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	66669	683	66563	329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGATCACAGGTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	13654322	13651694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13652711_13654249
ENSMUSG00000022680.15_13651759_13654394_1	chr16	-	1097	2	ISM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	66597	747	66491	265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCTGGTTTTCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	13654394	13651758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13652711_13654249
ENSMUSG00000022680.15_13651831_13654469_1	chr16	-	1100	2	ISM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	66522	819	66416	193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGGCTACACAGAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	13654469	13651830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13652711_13654249
ENSMUSG00000022680.15_13652024_13656016_1	chr16	-	1079	4	ISM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	64975	1012	64869	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGCTTTTGTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	13656016	13652023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959
ENSMUSG00000022680.15_13652140_13657200_1	chr16	-	1201	6	ISM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	63791	1128	63685	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCATCAAACACTCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	13657200	13652139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095
ENSMUSG00000022680.15_13652319_13657565_1	chr16	-	1104	7	ISM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	63426	1307	63320	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCTCAGGTCACATGTC	NA	NA	NA	NA	NA	NA	NA	NA	13657565	13652318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500
ENSMUSG00000022680.15_13652449_13658216_1	chr16	-	1094	8	ISM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	62775	1437	62669	-425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCACATTGACCTCCCGTAA	NA	NA	NA	NA	NA	NA	NA	NA	13658216	13652448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150
ENSMUSG00000022680.15_13652516_13658287_1	chr16	-	1098	8	ISM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	62704	1504	62598	-492	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACACTGCCCTACCACT	NA	NA	NA	NA	NA	NA	NA	NA	13658287	13652515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150
ENSMUSG00000022680.15_13654288_13663294_1	chr16	-	1102	9	ISM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	57697	3276	57591	-2264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCAGGCCCAGCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	13663294	13654287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198
ENSMUSG00000022680.15_13654820_13675327_1	chr16	-	1192	11	ISM	ENSMUSG00000022680.15	ENSMUST00000115804.9	2880	23	45558	2796	45558	-2796	internal_fragment	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCCTCTCTTGTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	13675327	13654819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240
ENSMUSG00000022680.15_13655977_13676792_1	chr16	-	1094	11	ISM	ENSMUSG00000022680.15	ENSMUST00000115804.9	2880	23	44093	3953	44093	-3953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAACTTAACAGCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	13676792	13655976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720
ENSMUSG00000022680.15_13657139_13687705_1	chr16	-	1081	12	ISM	ENSMUSG00000022680.15	ENSMUST00000115804.9	2880	23	33180	5115	33180	-5115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATTGCAGTCACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	13687705	13657138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666
ENSMUSG00000022680.15_13658212_13694011_1	chr16	-	1101	12	ISM	ENSMUSG00000022680.15	ENSMUST00000115804.9	2880	23	26874	6188	26874	-6188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGACAGCAGGGCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	13694011	13658211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841
ENSMUSG00000022680.15_13661652_13697391_1	chr16	-	1095	12	ISM	ENSMUSG00000022680.15	ENSMUST00000115804.9	2880	23	23494	9628	23494	5489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGATGACAGCAGAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	13697391	13661651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289
ENSMUSG00000022680.15_13665590_13702495_1	chr16	-	1109	12	ISM	ENSMUSG00000022680.15	ENSMUST00000115804.9	2880	23	18390	13566	18390	1551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTGATTAAAAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	13702495	13665589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429
ENSMUSG00000022681.16_13637096_13649524_1	chr16	+	665	7	ISM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	-19	3791	-19	-3788	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTAGCGTTTGTATCCG	NA	NA	NA	NA	NA	NA	NA	NA	13637095	13649524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470
ENSMUSG00000022681.16_13637208_13650298_1	chr16	+	651	8	ISM	ENSMUSG00000022681.16	ENSMUST00000115805.3	984	9	19	3014	19	-3014	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGGAGCCTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	13637207	13650298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200
ENSMUSG00000022681.16_13644745_13652658_1	chr16	+	674	8	ISM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	7630	657	7556	-654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGTTTACAGGTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	13644744	13652658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544
ENSMUSG00000022681.16_13644923_13653030_1	chr16	+	602	8	ISM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	7808	285	7734	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTTTGTTGAACATATTA	NA	NA	NA	NA	NA	NA	NA	NA	13644922	13653030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ENSMUSG00000022681.16_13646872_13653206_1	chr16	+	599	6	ISM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	9757	109	9683	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTCACCTGATAAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	13646871	13653206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ENSMUSG00000022681.16_13646896_13653206_1	chr16	+	575	6	ISM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	9781	109	9707	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTCACCTGATAAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	13646895	13653206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ENSMUSG00000022681.16_13648982_13653315_1	chr16	+	637	5	ISM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	11867	0	11793	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTAGATGACTTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	13648981	13653315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ENSMUSG00000022682.9_13598572_13626902_1	chr16	+	1544	15	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	-5	5801	-5	2293	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAAGATCTGCCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	13598571	13626902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845
ENSMUSG00000022682.9_13599883_13624521_1	chr16	+	973	11	FSM	ENSMUSG00000022682.9	ENST00000551901.6	1079	11	18	88	18	-88	multi-exon	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACCATTTTATTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	13599882	13624521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13622812_13622944_13624422
ENSMUSG00000022682.9_13599883_13624521_2	chr16	+	968	11	NNC	ENSMUSG00000022682.9	novel	1079	11	NA	NA	18	-88	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACCATTTTATTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	13599882	13624521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613853_13613942_13622812_13622944_13624422
ENSMUSG00000022682.9_13599907_13628423_1	chr16	+	1470	15	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	1330	4280	42	3814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCGTTATCCGCAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	13599906	13628423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367
ENSMUSG00000022682.9_13606639_13624609_1	chr16	+	921	9	NNC	ENSMUSG00000022682.9	novel	1079	11	NA	NA	6774	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTGAGGGTTCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	13606638	13624609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_13606732_13606823_13606954_13607402_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13622812_13622944_13624422
ENSMUSG00000022682.9_13606696_13629448_1	chr16	+	1463	14	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	8119	3255	6831	-3255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGTTTAAGAAATCTACTA	NA	NA	NA	NA	NA	NA	NA	NA	13606695	13629448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385
ENSMUSG00000022682.9_13606881_13631013_1	chr16	+	1455	14	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	8304	1690	7016	-1690	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTGGCCTTACTCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	13606880	13631013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ENSMUSG00000022682.9_13606934_13631086_1	chr16	+	1475	14	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	8357	1617	7069	-1617	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTATATACCAGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	13606933	13631086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ENSMUSG00000022682.9_13616515_13631514_1	chr16	+	1458	8	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	17938	1189	16650	-1189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGGGTGTAATGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	13616514	13631514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ENSMUSG00000022682.9_13616567_13631583_1	chr16	+	1475	8	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	17990	1120	16702	-1120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCAAAGCTGAACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	13616566	13631583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ENSMUSG00000022682.9_13617842_13631706_1	chr16	+	1458	7	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	19265	997	17977	-997	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTCAGGCCGACTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	13617841	13631706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ENSMUSG00000022682.9_13622907_13631840_1	chr16	+	1459	6	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	24330	863	23042	-863	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGTAGACCAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	13622906	13631840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ENSMUSG00000022682.9_13624533_13631988_1	chr16	+	1460	5	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	25956	715	24668	-715	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGGACTGTGGACGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	13624532	13631988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ENSMUSG00000022682.9_13626883_13632114_1	chr16	+	1474	4	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	28306	589	27018	-589	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCACAATATTTTTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	13626882	13632114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13626955_13628367_13628521_13629385_13629474_13630953
ENSMUSG00000022682.9_13628391_13632242_1	chr16	+	1507	3	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	29814	461	28526	-461	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCTTTTATATGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	13628390	13632242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13628521_13629385_13629474_13630953
ENSMUSG00000022682.9_13628481_13632277_1	chr16	+	1452	3	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	29904	426	28616	-426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGCCAGCCTTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	13628480	13632277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13628521_13629385_13629474_13630953
ENSMUSG00000022684.16_13489884_13520900_1	chr16	+	2265	8	FSM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	162	576	0	-566	multi-exon	TRUE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTTATGAGCATTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	13489883	13520900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
ENSMUSG00000022684.16_13505274_13521267_1	chr16	+	2217	6	ISM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	15552	209	15390	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGAGACCGACAGACGG	NA	NA	NA	NA	NA	NA	NA	NA	13505273	13521267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
ENSMUSG00000022684.16_13505352_13521316_1	chr16	+	2188	6	ISM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	15630	160	15468	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGACAGAGACAATGG	NA	NA	NA	NA	NA	NA	NA	NA	13505351	13521316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
ENSMUSG00000022684.16_13505404_13521466_1	chr16	+	2286	6	ISM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	15682	10	15520	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATACAACCTTTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	13505403	13521466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
ENSMUSG00000022685.10_13355824_13424098_1	chr16	-	1468	5	ISM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	61936	0	61831	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCTTTAACTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	13424098	13355823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011
ENSMUSG00000022685.10_13356042_13444008_1	chr16	-	1407	8	ISM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	42026	218	41921	-218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGTGTCTGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	13444008	13356041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977
ENSMUSG00000022685.10_13356182_13446293_1	chr16	-	1403	9	ISM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	39741	358	39636	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAAGCTGGCTCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	13446293	13356181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237
ENSMUSG00000022685.10_13356345_13458194_1	chr16	-	1425	12	ISM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	27840	521	27735	-521	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCCACTGCTGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	13458194	13356344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116
ENSMUSG00000022685.10_13356738_13472374_1	chr16	-	1380	18	ISM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	13660	914	13555	-914	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAGTCCCTGACACATG	NA	NA	NA	NA	NA	NA	NA	NA	13472374	13356737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312
ENSMUSG00000022685.10_13384516_13483845_1	chr16	-	1449	20	ISM	ENSMUSG00000022685.10	ENST00000341484.11	1882	23	2189	25589	2084	-25589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGGAAGTGGACAGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	13483845	13384515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765
ENSMUSG00000022685.10_13424059_13485920_1	chr16	-	1364	20	ISM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	114	68235	9	-65132	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAGTGGAAAACCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	13485920	13424058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
ENSMUSG00000022685.10_13443976_13483847_1	chr16	-	578	8	NNC	ENSMUSG00000022685.10	novel	1346	16	NA	NA	2082	-85049	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAGATACATGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	13483847	13443975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13483761
ENSMUSG00000022687.13_44305412_44307761_1	chr16	-	991	3	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	33929	-6	33929	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGTCACGAGTGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	44307761	44305411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44306163_44307074_44307266_44307712
ENSMUSG00000022687.13_44305592_44308079_1	chr16	-	942	4	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	33611	174	33611	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCACTCCAATTTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	44308079	44305591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44306163_44307074_44307266_44307712_44307793_44307979
ENSMUSG00000022687.13_44305671_44308114_1	chr16	-	898	4	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	33576	253	33576	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGACCCTAAGCACACTG	NA	NA	NA	NA	NA	NA	NA	NA	44308114	44305670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44306163_44307074_44307266_44307712_44307793_44307979
ENSMUSG00000022687.13_44305730_44308171_1	chr16	-	896	4	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	33519	312	33519	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGATCCCAGAACCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	44308171	44305729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44306163_44307074_44307266_44307712_44307793_44307979
ENSMUSG00000022687.13_44305853_44308952_1	chr16	-	897	5	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	32738	435	32738	-435	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATGTGTTTCTATAATT	NA	NA	NA	NA	NA	NA	NA	NA	44308952	44305852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44306163_44307074_44307266_44307712_44307793_44307979_44308216_44308872
ENSMUSG00000022687.13_44306015_44310524_1	chr16	-	899	6	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	31166	597	31166	-597	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCATGTGTCCTTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	44310524	44306014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44306163_44307074_44307266_44307712_44307793_44307979_44308216_44308872_44309095_44310502
ENSMUSG00000022687.13_44306072_44310582_1	chr16	-	900	6	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	31108	654	31108	-654	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATCAGGGACCTACACAG	NA	NA	NA	NA	NA	NA	NA	NA	44310582	44306071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44306163_44307074_44307266_44307712_44307793_44307979_44308216_44308872_44309095_44310502
ENSMUSG00000022687.13_44307148_44311555_1	chr16	-	906	7	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	30135	1730	30135	-1730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAAACAGCAGTGAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	44311555	44307147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44307266_44307712_44307793_44307979_44308216_44308872_44309095_44310502_44310626_44310939_44311046_44311534
ENSMUSG00000022687.13_44307211_44311620_1	chr16	-	908	7	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	30070	1793	30070	-1793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTCACCAGCTGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	44311620	44307210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44307266_44307712_44307793_44307979_44308216_44308872_44309095_44310502_44310626_44310939_44311046_44311534
ENSMUSG00000022687.13_44308010_44312121_1	chr16	-	905	6	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	29569	2592	29569	-2592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGCACTGCCCAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	44312121	44308009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44308216_44308872_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055
ENSMUSG00000022687.13_44308057_44312182_1	chr16	-	919	6	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	29508	2639	29508	-2639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGGCTGCCCTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	44312182	44308056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44308216_44308872_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055
ENSMUSG00000022687.13_44308126_44312216_1	chr16	-	884	6	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	29474	2708	29474	-2708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGCCAACGGGCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	44312216	44308125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44308216_44308872_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055
ENSMUSG00000022687.13_44308873_44312781_1	chr16	-	951	6	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	28909	3455	28909	-3455	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGACACCTCAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	44312781	44308872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055_44312263_44312670
ENSMUSG00000022687.13_44309007_44313267_1	chr16	-	909	7	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	28423	3589	28423	-3589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGCACTGGAGCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	44313267	44309006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055_44312263_44312670_44312782_44313175
ENSMUSG00000022687.13_44310566_44316687_1	chr16	-	899	7	ISM	ENSMUSG00000022687.13	ENSMUST00000114634.3	4451	19	62573	5154	25003	-5148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGTGCTTCAATGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	44316687	44310565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44310626_44310939_44311046_44311534_44311717_44312055_44312263_44312670_44312782_44313175_44313336_44316614
ENSMUSG00000022687.13_44311535_44316922_1	chr16	-	968	5	ISM	ENSMUSG00000022687.13	ENSMUST00000114634.3	4451	19	62338	6123	24768	-6117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGCTGGACCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	44316922	44311534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44311717_44312055_44312263_44312670_44312782_44313175_44313336_44316614
ENSMUSG00000022687.13_44311664_44319832_1	chr16	-	908	6	ISM	ENSMUSG00000022687.13	ENSMUST00000114634.3	4451	19	59428	6252	21858	-6246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTGCTCCCTCCCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	44319832	44311663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44311717_44312055_44312263_44312670_44312782_44313175_44313336_44316614_44316923_44319763
ENSMUSG00000022687.13_44312171_44319999_1	chr16	-	907	5	ISM	ENSMUSG00000022687.13	ENSMUST00000114634.3	4451	19	59261	6759	21691	-6753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGTCTTTCCGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	44319999	44312170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44312263_44312670_44312782_44313175_44313336_44316614_44316923_44319763
ENSMUSG00000022687.13_44312707_44320813_1	chr16	-	917	5	ISM	ENSMUSG00000022687.13	ENSMUST00000114634.3	4451	19	58447	7295	20877	-7289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAGCAGCCAGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	44320813	44312706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44312782_44313175_44313336_44316614_44316923_44319763_44320037_44320712
ENSMUSG00000022687.13_44313249_44320970_1	chr16	-	926	4	ISM	ENSMUSG00000022687.13	ENSMUST00000114634.3	4451	19	58290	7837	20720	-7831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACGAAGTGGAGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	44320970	44313248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44313336_44316614_44316923_44319763_44320037_44320712
ENSMUSG00000022687.13_44316647_44322058_1	chr16	-	893	4	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	19632	11229	19632	-11229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCTGTACTACGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	44322058	44316646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44316923_44319763_44320037_44320712_44321007_44322008
ENSMUSG00000022687.13_44316673_44322137_1	chr16	-	946	4	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	19553	11255	19553	-11255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCCATGAGGGGAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	44322137	44316672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44316923_44319763_44320037_44320712_44321007_44322008
ENSMUSG00000022687.13_44316778_44323959_1	chr16	-	924	5	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	17731	11360	17731	-11360	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGTGCCCGGGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	44323959	44316777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44316923_44319763_44320037_44320712_44321007_44322008_44322153_44323891
ENSMUSG00000022687.13_44316836_44324005_1	chr16	-	912	5	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	17685	11418	17685	-11418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCGGGAACAACCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	44324005	44316835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44316923_44319763_44320037_44320712_44321007_44322008_44322153_44323891
ENSMUSG00000022687.13_44316910_44324038_1	chr16	-	871	5	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	17652	11492	17652	-11492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCGGGAGGGATACCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	44324038	44316909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44316923_44319763_44320037_44320712_44321007_44322008_44322153_44323891
ENSMUSG00000022687.13_44319899_44340738_1	chr16	-	874	5	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	952	14481	952	-14481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCCTCCGGCTGTCACGT	NA	NA	NA	NA	NA	NA	NA	NA	44340738	44319898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44320037_44320712_44321007_44322008_44322153_44323891_44324039_44340587
ENSMUSG00000022687.13_44320712_44341557_1	chr16	-	901	5	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	133	15294	133	-15294	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTTCCATGGGCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	44341557	44320711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44321007_44322008_44322153_44323891_44324039_44340587_44340867_44341521
ENSMUSG00000022687.13_44320819_44341663_1	chr16	-	900	5	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	27	15401	27	-15401	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGACACCACCAGCGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	44341663	44320818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_44321007_44322008_44322153_44323891_44324039_44340587_44340867_44341521
ENSMUSG00000022687.13_44340568_44379260_1	chr16	-	1020	4	NIC	ENSMUSG00000022687.13	novel	962	4	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGCAGTGTGACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	44379260	44340567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr16_-_44340867_44341521_44341699_44374492_44374577_44378800
ENSMUSG00000022687.13_44340568_44379260_2	chr16	-	1019	4	NNC	ENSMUSG00000022687.13	novel	962	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGCAGTGTGACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	44379260	44340567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_44340862_44341521_44341699_44374488_44374577_44378800
ENSMUSG00000022687.13_44340568_44379260_3	chr16	-	1022	4	NNC	ENSMUSG00000022687.13	novel	962	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGCAGTGTGACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	44379260	44340567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_44340867_44341523_44341699_44374488_44374577_44378800
ENSMUSG00000022687.13_44340568_44379260_4	chr16	-	1024	4	FSM	ENSMUSG00000022687.13	ENST00000485230.5	962	4	-61	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGCAGTGTGACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	44379260	44340567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_44340867_44341521_44341699_44374488_44374577_44378800
ENSMUSG00000022698.18_43960422_43981134_1	chr16	+	1686	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	206	2595	167	-403	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAGAACATCCCAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	43960421	43981134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ENSMUSG00000022698.18_43977436_43981265_1	chr16	+	1628	3	ISM	ENSMUSG00000022698.18	ENSMUST00000063520.15	3557	5	17187	1570	17181	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTGTGACCTTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	43977435	43981265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_43977557_43978242_43978310_43979825
ENSMUSG00000022698.18_43977448_43981358_1	chr16	+	1709	3	ISM	ENSMUSG00000022698.18	ENSMUST00000063520.15	3557	5	17199	1477	17193	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACATGTGAGATACGTT	NA	NA	NA	NA	NA	NA	NA	NA	43977447	43981358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_43977557_43978242_43978310_43979825
ENSMUSG00000022698.18_43977516_43981405_1	chr16	+	1688	3	ISM	ENSMUSG00000022698.18	ENSMUST00000063520.15	3557	5	17267	1430	17261	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAATTTCTTAGATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	43977515	43981405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_43977557_43978242_43978310_43979825
ENSMUSG00000022698.18_43978252_43981537_1	chr16	+	1770	2	ISM	ENSMUSG00000022698.18	ENSMUST00000063542.8	2136	4	17997	0	17997	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGGTATGAAAGTATCAT	NA	NA	NA	NA	NA	NA	NA	NA	43978251	43981537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_43978310_43979825
ENSMUSG00000022702.17_18696162_18730829_1	chr16	+	598	7	ISM	ENSMUSG00000022702.17	ENST00000340170.8	3393	21	139	58230	139	-15932	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAAGGTTTGACTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	18696161	18730829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795
ENSMUSG00000022702.17_18696162_18730854_1	chr16	+	623	7	ISM	ENSMUSG00000022702.17	ENST00000340170.8	3393	21	139	58205	139	-15907	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGTAAATATATTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	18696161	18730854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795
ENSMUSG00000022702.17_18746199_18770872_1	chr16	+	550	5	ISM	ENSMUSG00000022702.17	ENST00000340170.8	3393	21	50176	18187	50176	-18187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCTGATGGGAAAGCATA	NA	NA	NA	NA	NA	NA	NA	NA	18746198	18770872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18746274_18751617_18751813_18753767_18753930_18770406_18770466_18770813
ENSMUSG00000022702.17_18751619_18772763_1	chr16	+	540	5	ISM	ENSMUSG00000022702.17	ENST00000340170.8	3393	21	55596	16296	55596	-16296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATTCATTGGCCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	18751618	18772763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18751813_18753767_18753930_18770406_18770466_18770813_18770920_18772744
ENSMUSG00000022702.17_18753852_18774997_1	chr16	+	609	6	ISM	ENSMUSG00000022702.17	ENST00000340170.8	3393	21	57829	14062	57829	-14062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTAGTGGTAGGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	18753851	18774997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18753930_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918
ENSMUSG00000022702.17_18770900_18788363_1	chr16	+	570	5	ISM	ENSMUSG00000022702.17	ENST00000340170.8	3393	21	74877	696	74877	-696	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCCCAGGGCTAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	18770899	18788363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ENSMUSG00000022702.17_18773449_18788571_1	chr16	+	546	3	ISM	ENSMUSG00000022702.17	ENST00000340170.8	3393	21	77426	488	77426	-488	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCAGGGATCTCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	18773448	18788571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18773524_18774918_18775008_18788189
ENSMUSG00000022702.17_18773502_18788633_1	chr16	+	555	3	ISM	ENSMUSG00000022702.17	ENST00000340170.8	3393	21	77479	426	77479	-426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCAGGTGCTGTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	18773501	18788633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18773524_18774918_18775008_18788189
ENSMUSG00000022705.6_43574389_43627883_1	chr16	+	804	4	ISM	ENSMUSG00000022705.6	ENSMUST00000229953.2	1712	8	0	15412	0	-15324	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATAACTATTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	43574388	43627883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_43574633_43582570_43582875_43610960_43611074_43627740
ENSMUSG00000022705.6_43574493_43637352_1	chr16	+	724	5	ISM	ENSMUSG00000022705.6	ENSMUST00000229953.2	1712	8	104	5943	104	-5855	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCCTGATTTTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	43574492	43637352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_43574633_43582570_43582875_43610960_43611074_43627740_43627884_43637328
ENSMUSG00000022705.6_43574553_43637394_1	chr16	+	706	5	ISM	ENSMUSG00000022705.6	ENSMUST00000229953.2	1712	8	164	5901	164	-5813	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCCCTTTGGGGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	43574552	43637394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_43574633_43582570_43582875_43610960_43611074_43627740_43627884_43637328
ENSMUSG00000022705.6_43574600_43637449_1	chr16	+	714	5	ISM	ENSMUSG00000022705.6	ENSMUST00000229953.2	1712	8	211	5846	211	-5758	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGGCGAAGAAAACGGA	NA	NA	NA	NA	NA	NA	NA	NA	43574599	43637449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_43574633_43582570_43582875_43610960_43611074_43627740_43627884_43637328
ENSMUSG00000022705.6_43582584_43641704_1	chr16	+	803	5	ISM	ENSMUSG00000022705.6	ENST00000295881.9	1489	8	8300	1503	0	-1503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCCTTGAGGCATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	43582583	43641704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_43582875_43610960_43611074_43627740_43627884_43637328_43637526_43641645
ENSMUSG00000022705.6_43582844_43643050_1	chr16	+	710	7	ISM	ENSMUSG00000022705.6	ENST00000295881.9	1489	8	8560	157	260	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATACCCACTGTCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	43582843	43643050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_43582875_43610960_43611074_43627740_43627884_43637328_43637526_43641645_43641779_43641877_43641926_43643005
ENSMUSG00000022706.17_18690768_18695289_1	chr16	-	957	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	323	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCGTTTATTTTAATC	NA	NA	NA	NA	NA	NA	NA	NA	18695289	18690767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
ENSMUSG00000022706.17_18690871_18695289_1	chr16	-	854	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	323	103	0	-103	multi-exon	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTCACCTGCCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	18695289	18690870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
ENSMUSG00000022706.17_18691078_18695612_1	chr16	-	970	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	0	310	0	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTGTCCTGGGAACATG	NA	NA	NA	NA	NA	NA	NA	NA	18695612	18691077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
ENSMUSG00000022707.17_70110837_70324189_1	chr16	+	2007	13	ISM	ENSMUSG00000022707.17	ENSMUST00000163832.8	2984	16	0	42415	0	-2989	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTCTTCGCTCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	70110836	70324189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_70111184_70157745_70157916_70198621_70198742_70230436_70230559_70231401_70231538_70233815_70233907_70237997_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004
ENSMUSG00000022707.17_70110951_70325895_1	chr16	+	2021	14	FSM	ENSMUSG00000022707.17	ENSMUST00000171132.8	3303	14	-1	1283	-1	-1283	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATATCCTTTTCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	70110950	70325895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_70111184_70157745_70157916_70198621_70198738_70230432_70230559_70231401_70231538_70233815_70233907_70237997_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004_70324190_70325767
ENSMUSG00000022707.17_70157843_70366025_1	chr16	+	1961	15	ISM	ENSMUSG00000022707.17	ENSMUST00000163832.8	2984	16	47006	579	46821	-577	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGCCAAAACATCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	70157842	70366025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_70157916_70198621_70198742_70230436_70230559_70231401_70231538_70233815_70233907_70237997_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004_70324190_70325767_70325899_70357911_70358030_70365876
ENSMUSG00000022707.17_70230501_70366280_1	chr16	+	1959	13	ISM	ENSMUSG00000022707.17	ENSMUST00000163832.8	2984	16	119664	324	119479	-322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGGTGGCCTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	70230500	70366280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_70230559_70231401_70231538_70233815_70233907_70237997_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004_70324190_70325767_70325899_70357911_70358030_70365876
ENSMUSG00000022707.17_70231402_70366386_1	chr16	+	2007	12	ISM	ENSMUSG00000022707.17	ENSMUST00000163832.8	2984	16	120565	218	120380	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACATAGCACTAATATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	70231401	70366386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_70231538_70233815_70233907_70237997_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004_70324190_70325767_70325899_70357911_70358030_70365876
ENSMUSG00000022707.17_70237996_70366604_1	chr16	+	2000	10	ISM	ENSMUSG00000022707.17	ENSMUST00000163832.8	2984	16	127159	0	126974	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTAATGTGCTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	70237995	70366604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004_70324190_70325767_70325899_70357911_70358030_70365876
ENSMUSG00000022708.17_43067647_43430414_1	chr16	+	1237	6	ISM	ENSMUSG00000022708.17	ENSMUST00000114691.8	2891	7	0	9045	0	-9012	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCACTGCCGGAAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	43067646	43430414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_43067783_43122931_43122979_43283309_43283350_43390043_43390145_43397923_43398112_43429689
ENSMUSG00000022708.17_43390064_43430619_1	chr16	+	1199	3	ISM	ENSMUSG00000022708.17	ENSMUST00000114690.8	2759	5	61438	8871	20	-8807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTCAGCTCCTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	43390063	43430619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_43390145_43397923_43398112_43429689
ENSMUSG00000022708.17_43390103_43429748_1	chr16	+	453	4	ISM	ENSMUSG00000022708.17	ENST00000676079.1	2799	5	59	9678	59	-9678	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATTCCGTGCTCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	43390102	43429748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_43390145_43397392_43397557_43397923_43398112_43429689
ENSMUSG00000022708.17_43431058_43438902_1	chr16	+	454	2	ISM	ENSMUSG00000022708.17	ENST00000676079.1	2799	5	41014	524	41014	-524	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGCTGGAGCGACACG	NA	NA	NA	NA	NA	NA	NA	NA	43431057	43438902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_43431295_43438685
ENSMUSG00000022708.17_43431142_43439034_1	chr16	+	502	2	ISM	ENSMUSG00000022708.17	ENST00000676079.1	2799	5	41098	392	41098	-392	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGCCCAGCAAAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	43431141	43439034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_43431295_43438685
ENSMUSG00000022708.17_43431223_43439072_1	chr16	+	459	2	ISM	ENSMUSG00000022708.17	ENST00000676079.1	2799	5	41179	354	41179	-354	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGACCACATGAGGATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	43431222	43439072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_43431295_43438685
ENSMUSG00000022711.17_8455538_8474693_1	chr16	+	1140	9	FSM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	0	702	0	-702	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTATATCTTAAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	8455537	8474693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ENSMUSG00000022711.17_8455587_8474753_1	chr16	+	1151	9	FSM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	49	642	-33	-642	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCAAAGCAGCACCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	8455586	8474753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ENSMUSG00000022711.17_8455620_8474803_1	chr16	+	1168	9	FSM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	82	592	0	-592	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAGGTAGCAGACGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	8455619	8474803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ENSMUSG00000022711.17_8460600_8473500_1	chr16	+	388	4	FSM	ENSMUSG00000022711.17	ENST00000569958.5	388	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTCTTCCCTTGACCCG	NA	NA	NA	NA	NA	NA	NA	NA	8460599	8473500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_8460714_8466749_8466822_8469273_8469390_8473414
ENSMUSG00000022711.17_8460690_8474951_1	chr16	+	1155	8	ISM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	5152	444	90	-444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCACTGCCCTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	8460689	8474951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ENSMUSG00000022711.17_8463293_8475069_1	chr16	+	1189	7	ISM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	7755	326	2693	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCACCATACCTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	8463292	8475069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ENSMUSG00000022711.17_8466586_8475234_1	chr16	+	1171	5	ISM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	11048	161	5986	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGATGCTGTGTTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	8466585	8475234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ENSMUSG00000022711.17_8469272_8475395_1	chr16	+	1232	3	ISM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	13734	0	8672	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTGTGGCCGAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	8469271	8475395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_8469390_8473414_8473553_8474419
ENSMUSG00000022721.20_18066747_18067804_1	chr16	+	824	2	ISM	ENSMUSG00000022721.20	ENSMUST00000115640.8	2367	12	0	3562	0	-3562	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTGGTGACCCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	18066746	18067804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18067116_18067349
ENSMUSG00000022721.20_18066873_18068343_1	chr16	+	817	3	ISM	ENSMUSG00000022721.20	ENSMUST00000115640.8	2367	12	126	3023	-53	-3023	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACCCTGGCTGCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	18066872	18068343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18067116_18067349_18067898_18068317
ENSMUSG00000022721.20_18066926_18068407_1	chr16	+	828	3	ISM	ENSMUSG00000022721.20	ENSMUST00000115640.8	2367	12	179	2959	0	-2959	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCATCACCCCAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	18066925	18068407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18067116_18067349_18067898_18068317
ENSMUSG00000022721.20_18067102_18068791_1	chr16	+	779	4	ISM	ENSMUSG00000022721.20	ENSMUST00000115640.8	2367	12	355	2575	176	-2575	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTCCCTTTGACACTGT	NA	NA	NA	NA	NA	NA	NA	NA	18067101	18068791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683
ENSMUSG00000022721.20_18067428_18069036_1	chr16	+	778	4	ISM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	502	2330	502	-2330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGACCCTGAGACATAT	NA	NA	NA	NA	NA	NA	NA	NA	18067427	18069036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18067898_18068317_18068427_18068683_18068866_18069019
ENSMUSG00000022721.20_18067532_18069243_1	chr16	+	793	5	ISM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	606	2123	606	-2123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGACTAAAGGCCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	18067531	18069243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222
ENSMUSG00000022721.20_18067589_18069289_1	chr16	+	782	5	ISM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	663	2077	663	-2077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGCCAGTGGGGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	18067588	18069289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222
ENSMUSG00000022721.20_18067690_18069472_1	chr16	+	790	6	ISM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	764	1894	764	-1894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGACCTGCTAGGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	18067689	18069472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412
ENSMUSG00000022721.20_18067875_18070112_1	chr16	+	780	7	ISM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	949	1254	949	-1254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTTCCCAGCCCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	18067874	18070112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989
ENSMUSG00000022721.20_18068384_18070604_1	chr16	+	789	8	ISM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	1458	762	1458	-762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGCAGGGCTGAGGATC	NA	NA	NA	NA	NA	NA	NA	NA	18068383	18070604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582
ENSMUSG00000022721.20_18068789_18070842_1	chr16	+	791	8	ISM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	1863	524	1863	-524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCTGTAACCCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	18068788	18070842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787
ENSMUSG00000022721.20_18069074_18071095_1	chr16	+	834	8	ISM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	2148	271	2148	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGCATAGAAGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	18069073	18071095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ENSMUSG00000022721.20_18069511_18071366_1	chr16	+	830	6	ISM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	2585	0	2585	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	18069510	18071366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ENSMUSG00000022722.19_59433312_59459530_1	chr16	-	1691	8	NNC	ENSMUSG00000022722.19	novel	1696	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATTTTTATCCTTAACA	NA	NA	NA	NA	NA	NA	NA	NA	59459530	59433311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_59434203_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
ENSMUSG00000022724.16_59303406_59307854_1	chr16	+	233	3	ISM	ENSMUSG00000022724.16	ENSMUST00000120674.8	1753	9	11221	4177	10975	-4177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCGAGGGCAGAGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	59303405	59307854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_59303472_59306895_59306999_59307790
ENSMUSG00000022744.13_58548273_58553385_1	chr16	+	918	5	FSM	ENSMUSG00000022744.13	ENSMUST00000023426.12	2147	5	0	1229	0	-157	multi-exon	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTACACCTTAATGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	58548272	58553385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_58548448_58549800_58550111_58551664_58551776_58552943_58553082_58553201
ENSMUSG00000022744.13_58548386_58553301_1	chr16	+	411	4	FSM	ENSMUSG00000022744.13	ENST00000511081.5	647	4	-5	241	-5	-241	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTCTGCCTGGCCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	58548385	58553301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_58548448_58551664_58551776_58552943_58553082_58553201
ENSMUSG00000022744.13_58548386_58553446_1	chr16	+	866	5	FSM	ENSMUSG00000022744.13	ENSMUST00000023426.12	2147	5	113	1168	-5	-96	multi-exon	FALSE	canonical	NA	NA	NA	NA	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTTCATACATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	58548385	58553446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_58548448_58549800_58550111_58551664_58551776_58552943_58553082_58553201
ENSMUSG00000022744.13_58548386_58553984_1	chr16	+	1470	6	FSM	ENSMUSG00000022744.13	ENST00000394185.6	2139	6	63	606	-5	13	multi-exon	FALSE	canonical	NA	NA	NA	NA	3007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAAAATGATGTTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	58548385	58553984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_58548448_58549520_58549587_58549800_58550111_58551664_58551776_58552943_58553082_58553201
ENSMUSG00000022744.13_58549835_58554133_1	chr16	+	1457	4	ISM	ENSMUSG00000022744.13	ENSMUST00000162057.8	1540	6	1547	-162	1444	162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCCCCTCCCCCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	58549834	58554133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_58550111_58551664_58551776_58552943_58553082_58553201
ENSMUSG00000022744.13_58552944_58553446_1	chr16	+	383	2	ISM	ENSMUSG00000022744.13	ENST00000511081.5	647	4	4553	96	4553	-96	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTTCATACATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	58552943	58553446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_58553082_58553201
ENSMUSG00000022744.13_58553019_58553542_1	chr16	+	404	2	ISM	ENSMUSG00000022744.13	ENST00000511081.5	647	4	4628	0	4628	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAAGCCCCTTTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	58553018	58553542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_58553082_58553201
ENSMUSG00000022744.13_58553019_58554614_1	chr16	+	1476	2	ISM	ENSMUSG00000022744.13	ENST00000394185.6	2139	6	4696	-24	4628	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTGAGATCACAACATG	NA	NA	NA	NA	NA	NA	NA	NA	58553018	58554614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_58553082_58553201
ENSMUSG00000022749.9_56990269_56992134_1	chr16	-	684	2	ISM	ENSMUSG00000022749.9	ENST00000475134.1	1874	17	46657	-433	46657	433	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAATGATTAGCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	56992134	56990268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56990804_56991985
ENSMUSG00000022749.9_56990401_56993483_1	chr16	-	695	3	ISM	ENSMUSG00000022749.9	ENST00000475134.1	1874	17	45308	-301	45308	301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTTTTAAAACAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	56993483	56990400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56990804_56991985_56992181_56993386
ENSMUSG00000022749.9_56990507_56998350_1	chr16	-	684	4	ISM	ENSMUSG00000022749.9	ENST00000475134.1	1874	17	40441	-195	40441	195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTATTAAATGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	56998350	56990506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294
ENSMUSG00000022749.9_56990702_57004849_1	chr16	-	769	6	ISM	ENSMUSG00000022749.9	ENST00000344949.9	3577	18	46898	1480	33942	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAATTAAGGCAACGAAG	NA	NA	NA	NA	NA	NA	NA	NA	57004849	56990701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742
ENSMUSG00000022749.9_56991983_57009682_1	chr16	-	771	7	ISM	ENSMUSG00000022749.9	ENST00000344949.9	3577	18	42065	2761	29109	-1281	internal_fragment	TRUE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTTTATTATTATTATT	NA	NA	NA	NA	NA	NA	NA	NA	57009682	56991982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624
ENSMUSG00000022749.9_56992152_57009795_1	chr16	-	715	7	ISM	ENSMUSG00000022749.9	ENST00000344949.9	3577	18	41952	2930	28996	-1450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTTAAGGGAGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	57009795	56992151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624
ENSMUSG00000022749.9_56993422_57012989_1	chr16	-	762	8	ISM	ENSMUSG00000022749.9	ENST00000344949.9	3577	18	38758	4200	25802	-2720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGTTAAAGAAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	57012989	56993421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971
ENSMUSG00000022749.9_56998295_57013094_1	chr16	-	766	7	ISM	ENSMUSG00000022749.9	ENST00000344949.9	3577	18	38653	9073	25697	-7593	internal_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAGTAGTAATACACGTA	NA	NA	NA	NA	NA	NA	NA	NA	57013094	56998294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971
ENSMUSG00000022749.9_57003213_57018747_1	chr16	-	782	7	ISM	ENSMUSG00000022749.9	ENST00000475134.1	1874	17	20044	12511	20044	-12511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTCTTACAGCGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	57018747	57003212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643
ENSMUSG00000022749.9_57003268_57019106_1	chr16	-	747	8	ISM	ENSMUSG00000022749.9	ENSMUST00000226586.2	3112	19	32623	13558	19685	-12566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTAGGGAAAAGGTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	57019106	57003267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086
ENSMUSG00000022749.9_57004800_57019282_1	chr16	-	692	8	ISM	ENSMUSG00000022749.9	ENSMUST00000226586.2	3112	19	32447	15090	19509	-14098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCCATTGGATTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	57019282	57004799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221
ENSMUSG00000022749.9_57009625_57028615_1	chr16	-	712	7	ISM	ENSMUSG00000022749.9	ENSMUST00000226586.2	3112	19	23114	19915	10176	-18923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTCACGTTGATTAGT	NA	NA	NA	NA	NA	NA	NA	NA	57028615	57009624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566
ENSMUSG00000022749.9_57009735_57032789_1	chr16	-	733	8	ISM	ENSMUSG00000022749.9	ENSMUST00000226586.2	3112	19	18940	20025	6002	-19033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCATTGAGTCTGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	57032789	57009734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733
ENSMUSG00000022749.9_57013028_57034632_1	chr16	-	778	7	ISM	ENSMUSG00000022749.9	ENSMUST00000226586.2	3112	19	17097	23318	4159	-22326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTCTGGCTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	57034632	57013027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526
ENSMUSG00000022749.9_57018713_57038749_1	chr16	-	720	7	ISM	ENSMUSG00000022749.9	ENSMUST00000226586.2	3112	19	12980	29003	42	-28011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACATAGAAGACCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	57038749	57018712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671
ENSMUSG00000022749.9_57019222_57051729_1	chr16	-	725	6	ISM	ENSMUSG00000022749.9	ENSMUST00000226586.2	3112	19	0	29512	0	-28520	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACCACGTTGGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	57051729	57019221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ENSMUSG00000022750.19_17582264_17602195_1	chr16	+	1261	4	ISM	ENSMUSG00000022750.19	ENSMUST00000120488.3	2596	7	1609	9051	1609	-9033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGAGCGCTATGACC	NA	NA	NA	NA	NA	NA	NA	NA	17582263	17602195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17582511_17589567_17589734_17594265_17594985_17602066
ENSMUSG00000022750.19_17582375_17607041_1	chr16	+	1255	5	ISM	ENSMUSG00000022750.19	ENSMUST00000120488.3	2596	7	1720	4205	1720	-4187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACCTGTGGTCGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	17582374	17607041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000
ENSMUSG00000022750.19_17582432_17607100_1	chr16	+	1257	5	ISM	ENSMUSG00000022750.19	ENSMUST00000120488.3	2596	7	1777	4146	1777	-4128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAACACGTGGCATACT	NA	NA	NA	NA	NA	NA	NA	NA	17582431	17607100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000
ENSMUSG00000022750.19_17589685_17610330_1	chr16	+	1236	5	ISM	ENSMUSG00000022750.19	ENSMUST00000120488.3	2596	7	9030	916	9030	-898	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCCACTCCCAGCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	17589684	17610330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
ENSMUSG00000022750.19_17594353_17610507_1	chr16	+	1277	4	ISM	ENSMUSG00000022750.19	ENSMUST00000120488.3	2596	7	13698	739	13698	-721	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGCCTGTGTGCTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	17594352	17610507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17594985_17602066_17602260_17607000_17607235_17610289
ENSMUSG00000022750.19_17594547_17610698_1	chr16	+	1274	4	ISM	ENSMUSG00000022750.19	ENSMUST00000120488.3	2596	7	13892	548	13892	-530	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGCCGTAGAGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	17594546	17610698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17594985_17602066_17602260_17607000_17607235_17610289
ENSMUSG00000022750.19_17594819_17610961_1	chr16	+	1265	4	ISM	ENSMUSG00000022750.19	ENSMUST00000120488.3	2596	7	14164	285	14164	-267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGTTAAGTAAGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	17594818	17610961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17594985_17602066_17602260_17607000_17607235_17610289
ENSMUSG00000022750.19_17602085_17611228_1	chr16	+	1348	3	ISM	ENSMUSG00000022750.19	ENSMUST00000120488.3	2596	7	21430	18	21430	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTGTTACATCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	17602084	17611228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17602260_17607000_17607235_17610289
ENSMUSG00000022750.19_17602183_17611246_1	chr16	+	1268	3	ISM	ENSMUSG00000022750.19	ENSMUST00000120488.3	2596	7	21528	0	21528	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTACAGTCTGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	17602182	17611246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17602260_17607000_17607235_17610289
ENSMUSG00000022752.10_56942066_56957134_1	chr16	+	867	4	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	0	19934	0	-19934	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTTGGGAAAGAGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	56942065	56957134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060
ENSMUSG00000022752.10_56942243_56958450_1	chr16	+	784	5	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	177	18618	177	-18618	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGATGATATAATTTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	56942242	56958450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392
ENSMUSG00000022752.10_56942283_56958513_1	chr16	+	807	5	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	217	18555	217	-18555	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAGAGGCTTTAGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	56942282	56958513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392
ENSMUSG00000022752.10_56942392_56961016_1	chr16	+	801	6	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	326	16052	326	-16052	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGATGCTCAAGGCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	56942391	56961016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941
ENSMUSG00000022752.10_56942471_56961079_1	chr16	+	785	6	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	405	15989	405	-15989	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGCAGTGCCAACGCGG	NA	NA	NA	NA	NA	NA	NA	NA	56942470	56961079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941
ENSMUSG00000022752.10_56953456_56963130_1	chr16	+	799	6	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	11390	13938	11390	-13938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACAACCTATGCTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	56953455	56963130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083
ENSMUSG00000022752.10_56953525_56963181_1	chr16	+	781	6	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	11459	13887	11459	-13887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATGAACTCAGACGTTT	NA	NA	NA	NA	NA	NA	NA	NA	56953524	56963181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083
ENSMUSG00000022752.10_56955052_56965145_1	chr16	+	785	6	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	12986	11923	12986	-11923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTTTTGCATTGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	56955051	56965145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053
ENSMUSG00000022752.10_56957059_56966476_1	chr16	+	796	6	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	14993	10592	14993	-10592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGCTGAAGGCTATGC	NA	NA	NA	NA	NA	NA	NA	NA	56957058	56966476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392
ENSMUSG00000022752.10_56958458_56970228_1	chr16	+	796	7	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	16392	6840	16392	-6840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCAGCAAGGCTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	56958457	56970228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182
ENSMUSG00000022752.10_56961000_56973002_1	chr16	+	788	7	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	18934	4066	18934	-4066	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATGGAGATGGCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	56960999	56973002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ENSMUSG00000022752.10_56961111_56973147_1	chr16	+	822	7	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	19045	3921	19045	-3921	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTCAACCCTGAAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	56961110	56973147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ENSMUSG00000022752.10_56963201_56973267_1	chr16	+	786	6	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	21135	3801	21135	-3801	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTTTGCAGTCTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	56963200	56973267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ENSMUSG00000022752.10_56966461_56973503_1	chr16	+	828	4	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	24395	3565	24395	-3565	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAGTAAGTGCTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	56966460	56973503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_56966510_56968095_56968194_56970182_56970306_56972945
ENSMUSG00000022754.7_56626495_56631938_1	chr16	-	695	2	ISM	ENSMUSG00000022754.7	ENSMUST00000023435.6	2701	6	74591	971	74591	-971	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTTCTGCATTTTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	56631938	56626494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56627140_56631888
ENSMUSG00000022754.7_56626548_56631991_1	chr16	-	695	2	ISM	ENSMUSG00000022754.7	ENSMUST00000023435.6	2701	6	74538	1024	74538	-1024	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGAGACTTTTCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	56631991	56626547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56627140_56631888
ENSMUSG00000022754.7_56626660_56642679_1	chr16	-	718	3	ISM	ENSMUSG00000022754.7	ENSMUST00000023435.6	2701	6	63850	1136	63850	-1136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGCATGCACCTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	56642679	56626659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56627140_56631888_56632035_56642587
ENSMUSG00000022754.7_56626853_56643865_1	chr16	-	733	4	ISM	ENSMUSG00000022754.7	ENSMUST00000023435.6	2701	6	62664	1329	62664	-1329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACACTGTGCATGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	56643865	56626852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56627140_56631888_56632035_56642587_56642773_56643750
ENSMUSG00000022754.7_56626853_56643909_1	chr16	-	777	4	ISM	ENSMUSG00000022754.7	ENSMUST00000023435.6	2701	6	62620	1329	62620	-1329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACACTGTGCATGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	56643909	56626852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56627140_56631888_56632035_56642587_56642773_56643750
ENSMUSG00000022754.7_56627056_56646140_1	chr16	-	734	5	ISM	ENSMUSG00000022754.7	ENSMUST00000023435.6	2701	6	60389	1532	60389	-1532	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTATGATCTTGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	56646140	56627055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56627140_56631888_56632035_56642587_56642773_56643750_56643958_56646028
ENSMUSG00000022754.7_56627098_56646206_1	chr16	-	758	5	ISM	ENSMUSG00000022754.7	ENSMUST00000023435.6	2701	6	60323	1574	60323	-1574	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTCCTGAAGCATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	56646206	56627097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56627140_56631888_56632035_56642587_56642773_56643750_56643958_56646028
ENSMUSG00000022754.7_56631982_56706227_1	chr16	-	690	5	ISM	ENSMUSG00000022754.7	ENSMUST00000023435.6	2701	6	302	6458	302	-6458	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCAAAATAAAATGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	56706227	56631981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56632035_56642587_56642773_56643750_56643958_56646028_56646222_56706175
ENSMUSG00000022754.7_56642607_56706346_1	chr16	-	737	4	ISM	ENSMUSG00000022754.7	ENSMUST00000023435.6	2701	6	183	17083	183	-17083	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACCTGGTTCTGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	56706346	56642606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56642773_56643750_56643958_56646028_56646222_56706175
ENSMUSG00000022754.7_56642702_56706403_1	chr16	-	699	4	ISM	ENSMUSG00000022754.7	ENSMUST00000023435.6	2701	6	126	17178	126	-17178	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCACATTTTCGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	56706403	56642701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56642773_56643750_56643958_56646028_56646222_56706175
ENSMUSG00000022754.7_56643753_56706529_1	chr16	-	752	3	ISM	ENSMUSG00000022754.7	ENSMUST00000023435.6	2701	6	0	18229	0	-18229	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGTAAGTATGAAGAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	56706529	56643752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56643958_56646028_56646222_56706175
ENSMUSG00000022757.20_56510695_56533204_1	chr16	-	1663	7	ISM	ENSMUSG00000022757.20	ENST00000675890.1	1914	8	4596	-1	-11	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	56533204	56510694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56511517_56514762_56514848_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973
ENSMUSG00000022757.20_56510695_56537753_1	chr16	-	1965	8	FSM	ENSMUSG00000022757.20	ENST00000674758.1	1972	8	8	-1	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	56537753	56510694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533282_56537533
ENSMUSG00000022757.20_56510695_56537753_2	chr16	-	1964	8	NNC	ENSMUSG00000022757.20	novel	1972	8	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	11427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	56537753	56510694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525974_56526058_56532973_56533282_56537533
ENSMUSG00000022757.20_56510695_56537753_3	chr16	-	1926	9	FSM	ENSMUSG00000022757.20	ENST00000620299.5	1972	9	47	-1	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	56537753	56510694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_56511517_56512238_56512280_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ENSMUSG00000022757.20_56510695_56537753_4	chr16	-	1761	8	FSM	ENSMUSG00000022757.20	ENST00000676431.1	1788	8	28	-1	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	56537753	56510694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537659
ENSMUSG00000022757.20_56510839_56537674_1	chr16	-	1645	8	FSM	ENSMUSG00000022757.20	ENST00000675890.1	1914	8	126	143	87	-143	multi-exon	FALSE	canonical	NA	NA	NA	NA	2849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGCTAGGCTAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	56537674	56510838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_56511517_56514762_56514848_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ENSMUSG00000022757.20_56510956_56533339_1	chr16	-	1554	7	ISM	ENSMUSG00000022757.20	ENST00000674615.1	2004	8	4442	260	-146	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAAATGAATATTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	56533339	56510955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973
ENSMUSG00000022757.20_56510989_56524895_1	chr16	-	1066	6	ISM	ENSMUSG00000022757.20	ENST00000675692.1	1967	9	12905	293	8298	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAATTTACCAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	56524895	56510988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56511517_56512238_56512280_56514762_56514848_56517821_56517960_56521431_56521600_56524789
ENSMUSG00000022757.20_56511240_56521482_1	chr16	-	585	5	ISM	ENSMUSG00000022757.20	ENST00000676111.1	1697	8	11711	544	11711	-544	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGCAAGTACCATGACCC	NA	NA	NA	NA	NA	NA	NA	NA	56521482	56511239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56511517_56512238_56512280_56514762_56514853_56517833_56517960_56521431
ENSMUSG00000022757.20_56511240_56533087_1	chr16	-	1054	8	ISM	ENSMUSG00000022757.20	ENST00000675692.1	1967	9	4713	544	106	-544	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGCAAGTACCATGACCC	NA	NA	NA	NA	NA	NA	NA	NA	56533087	56511239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56511517_56512238_56512280_56514762_56514848_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973
ENSMUSG00000022757.20_56511240_56537753_1	chr16	-	1432	8	FSM	ENSMUSG00000022757.20	ENST00000674615.1	2004	8	28	544	8	-544	multi-exon	FALSE	canonical	NA	NA	NA	NA	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGCAAGTACCATGACCC	NA	NA	NA	NA	NA	NA	NA	NA	56537753	56511239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533282_56537533
ENSMUSG00000022757.20_56511345_56521534_1	chr16	-	532	5	ISM	ENSMUSG00000022757.20	ENST00000676111.1	1697	8	11659	649	11659	-649	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCATCTCAGCCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	56521534	56511344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56511517_56512238_56512280_56514762_56514853_56517833_56517960_56521431
ENSMUSG00000022757.20_56511430_56537674_1	chr16	-	1107	9	FSM	ENSMUSG00000022757.20	ENST00000675692.1	1967	9	126	734	87	-734	multi-exon	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTCTGGCCAGCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	56537674	56511429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_56511517_56512238_56512280_56514762_56514848_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ENSMUSG00000022757.20_56511482_56524840_1	chr16	-	511	6	ISM	ENSMUSG00000022757.20	ENST00000676111.1	1697	8	8353	786	8353	-786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGTTCCAGGGATATGG	NA	NA	NA	NA	NA	NA	NA	NA	56524840	56511481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56511517_56512238_56512280_56514762_56514853_56517833_56517960_56521431_56521600_56524789
ENSMUSG00000022758.15_17380584_17389876_1	chr16	+	2048	11	ISM	ENSMUSG00000022758.15	ENSMUST00000023441.11	2345	12	835	-1	835	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAGTAGTAGTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	17380583	17389876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17380736_17382819_17382892_17385301_17385378_17385569_17385664_17385736_17385818_17385896_17386039_17386124_17386235_17388221_17388316_17388396_17388463_17388602_17388681_17388793
ENSMUSG00000022760.18_17345942_17347012_1	chr16	-	877	2	ISM	ENSMUSG00000022760.18	ENSMUST00000231548.2	1110	5	1899	0	1899	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTTTGGCTTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	17347012	17345941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17346605_17346798
ENSMUSG00000022760.18_17346208_17348902_1	chr16	-	835	5	FSM	ENSMUSG00000022760.18	ENSMUST00000231548.2	1110	5	9	266	9	-266	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCTGCAAGCGGCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	17348902	17346207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348841
ENSMUSG00000022761.13_17326552_17338392_1	chr16	+	1215	9	ISM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	0	5805	0	-5274	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTATGTGTTTGGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	17326551	17338392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299
ENSMUSG00000022761.13_17326837_17338910_1	chr16	+	1195	10	ISM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	285	5287	-30	-4756	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATCAAGGACCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	17326836	17338910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754
ENSMUSG00000022761.13_17327076_17340075_1	chr16	+	1122	12	ISM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	524	4122	209	-3591	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCCAGTTCTGTGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	17327075	17340075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020
ENSMUSG00000022761.13_17329935_17340299_1	chr16	+	1140	11	ISM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	3383	3898	3068	-3367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGTAGGAAGATCGTACAG	NA	NA	NA	NA	NA	NA	NA	NA	17329934	17340299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244
ENSMUSG00000022761.13_17333837_17340587_1	chr16	+	1216	10	ISM	ENSMUSG00000022761.13	ENSMUST00000231292.2	2491	20	6970	3079	6970	-3079	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCTGGGACATGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	17333836	17340587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421
ENSMUSG00000022761.13_17335355_17340879_1	chr16	+	1119	10	ISM	ENSMUSG00000022761.13	ENSMUST00000231292.2	2491	20	8488	2787	8488	-2787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTTCCAGCTGTGTCGC	NA	NA	NA	NA	NA	NA	NA	NA	17335354	17340879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831
ENSMUSG00000022761.13_17336378_17341001_1	chr16	+	1195	9	ISM	ENSMUSG00000022761.13	ENSMUST00000231292.2	2491	20	9511	2665	9511	-2665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAAGCTGGGGATGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	17336377	17341001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831
ENSMUSG00000022761.13_17337350_17341278_1	chr16	+	1173	9	ISM	ENSMUSG00000022761.13	ENSMUST00000231292.2	2491	20	10483	2388	10483	-2388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGCCTGTGGACATTGG	NA	NA	NA	NA	NA	NA	NA	NA	17337349	17341278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140
ENSMUSG00000022761.13_17338336_17341973_1	chr16	+	1129	9	ISM	ENSMUSG00000022761.13	ENSMUST00000231292.2	2491	20	11469	1693	11469	-1693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACATGAAGGCTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	17338335	17341973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959
ENSMUSG00000022761.13_17338393_17342081_1	chr16	+	1180	9	ISM	ENSMUSG00000022761.13	ENSMUST00000231292.2	2491	20	11526	1585	11526	-1585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGTATGTTACGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	17338392	17342081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959
ENSMUSG00000022761.13_17338782_17343132_1	chr16	+	1229	10	ISM	ENSMUSG00000022761.13	ENSMUST00000231292.2	2491	20	11915	534	11915	-534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTACAATAACCGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	17338781	17343132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102
ENSMUSG00000022761.13_17340018_17343564_1	chr16	+	1173	10	ISM	ENSMUSG00000022761.13	ENSMUST00000231292.2	2491	20	13151	102	13151	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGCCAGCAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	17340017	17343564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ENSMUSG00000022761.13_17340243_17343666_1	chr16	+	1181	9	ISM	ENSMUSG00000022761.13	ENSMUST00000231292.2	2491	20	13376	0	13376	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAGAGTGAAGACACCC	NA	NA	NA	NA	NA	NA	NA	NA	17340242	17343666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ENSMUSG00000022761.13_17340507_17343853_1	chr16	+	1185	8	ISM	ENSMUSG00000022761.13	ENSMUST00000231292.2	2491	20	13640	-187	13640	187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTCTCTGTCAGGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	17340506	17343853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ENSMUSG00000022761.13_17341139_17344000_1	chr16	+	1083	6	ISM	ENSMUSG00000022761.13	ENSMUST00000231292.2	2491	20	14272	-334	14272	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTCGGTTAATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	17341138	17344000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ENSMUSG00000022761.13_17341185_17344086_1	chr16	+	1123	6	ISM	ENSMUSG00000022761.13	ENSMUST00000231292.2	2491	20	14318	-420	14318	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTGACTTTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	17341184	17344086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ENSMUSG00000022761.13_17341254_17344197_1	chr16	+	1165	6	ISM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	14702	0	14387	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCCGAGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	17341253	17344197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ENSMUSG00000022769.10_16948002_16950247_2	chr16	-	1105	3	NNC	ENSMUSG00000022769.10	novel	1108	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGTGCATGAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	16950247	16948001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_16948645_16949455_16949658_16949987
ENSMUSG00000022770.18_31483636_31690666_1	chr16	+	2782	24	NNC	ENSMUSG00000022770.18	novel	2716	24	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	7020	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTCCACACTGACACAG	NA	NA	NA	NA	NA	NA	NA	NA	31483635	31690666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676710_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_31483636_31690666_2	chr16	+	2782	24	NNC	ENSMUSG00000022770.18	novel	2716	24	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	6678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTCCACACTGACACAG	NA	NA	NA	NA	NA	NA	NA	NA	31483635	31690666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676365_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_31483636_31690666_3	chr16	+	2782	24	NNC	ENSMUSG00000022770.18	novel	2716	24	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	7209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTCCACACTGACACAG	NA	NA	NA	NA	NA	NA	NA	NA	31483635	31690666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686649_31686741_31690492
ENSMUSG00000022770.18_31483636_31690666_4	chr16	+	2783	24	FSM	ENSMUSG00000022770.18	ENST00000656944.1	2716	24	0	-67	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	7611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTCCACACTGACACAG	NA	NA	NA	NA	NA	NA	NA	NA	31483635	31690666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_31502942_31612462_1	chr16	+	823	6	ISM	ENSMUSG00000022770.18	ENST00000422288.6	2870	23	19307	78407	19304	-78137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAAGCAGTGTTCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	31502941	31612462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_31503113_31561923_31562089_31606899_31606951_31608994_31609120_31610532_31610703_31612321
ENSMUSG00000022770.18_31562029_31624492_1	chr16	+	749	7	ISM	ENSMUSG00000022770.18	ENST00000422288.6	2870	23	78394	66377	-11139	-66107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCAGCCAGGTACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	31562028	31624492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_31562089_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431
ENSMUSG00000022770.18_31608994_31690869_1	chr16	+	2338	19	ISM	ENSMUSG00000022770.18	ENSMUST00000115196.8	3418	23	35826	210	35393	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAAGTTAACTTTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	31608993	31690869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31673470_31673507_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_31610589_31691079_1	chr16	+	2366	18	ISM	ENSMUSG00000022770.18	ENSMUST00000115196.8	3418	23	37421	0	36988	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAATAAGAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	31610588	31691079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31673470_31673507_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_31615733_31691308_1	chr16	+	2295	16	ISM	ENSMUSG00000022770.18	ENSMUST00000115196.8	3418	23	42565	-229	42132	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAGAACTGCAGACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	31615732	31691308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31673470_31673507_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_31615783_31691360_1	chr16	+	2297	16	ISM	ENSMUSG00000022770.18	ENSMUST00000115196.8	3418	23	42615	-281	42182	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGAAGGAGTCCAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	31615782	31691360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31673470_31673507_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_31631570_31676424_1	chr16	+	725	9	ISM	ENSMUSG00000022770.18	ENST00000452595.5	3035	21	58292	14517	57969	-14175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTCAGAATTTCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	31631569	31676424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31675258_31675310_31676364
ENSMUSG00000022770.18_31648283_31676818_1	chr16	+	804	9	ISM	ENSMUSG00000022770.18	ENST00000452595.5	3035	21	75005	14123	74682	-13781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGCCAGTATAACAACCATC	NA	NA	NA	NA	NA	NA	NA	NA	31648282	31676818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31675258_31675310_31676364_31676467_31676709
ENSMUSG00000022770.18_31648283_31691628_1	chr16	+	2242	13	ISM	ENSMUSG00000022770.18	ENSMUST00000115196.8	3418	23	75115	-549	74682	126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATTGATGAGACTTACC	NA	NA	NA	NA	NA	NA	NA	NA	31648282	31691628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31673470_31673507_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_31648289_31691729_1	chr16	+	2337	13	ISM	ENSMUSG00000022770.18	ENSMUST00000115196.8	3418	23	75121	-650	74688	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCCTGTTCTCCTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	31648288	31691729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31673470_31673507_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_31655088_31676818_1	chr16	+	644	7	ISM	ENSMUSG00000022770.18	ENST00000667971.1	3518	23	171453	14621	81487	-13781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGCCAGTATAACAACCATC	NA	NA	NA	NA	NA	NA	NA	NA	31655087	31676818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31675258_31675310_31676364_31676467_31676709
ENSMUSG00000022770.18_31655088_31691861_1	chr16	+	2291	12	ISM	ENSMUSG00000022770.18	ENSMUST00000115196.8	3418	23	81920	-782	81487	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAAACTCCATTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	31655087	31691861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31673470_31673507_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_31661586_31692167_1	chr16	+	2387	10	ISM	ENSMUSG00000022770.18	ENSMUST00000115196.8	3418	23	88418	-1088	87985	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	31661585	31692167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_31661658_31666453_31666488_31672660_31672703_31673470_31673507_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_31676395_31690778_1	chr16	+	733	5	ISM	ENSMUSG00000022770.18	ENST00000452595.5	3035	21	103117	163	102794	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGCCACTTTTCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	31676394	31690778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022771.18_16904419_16912907_1	chr16	-	1697	12	ISM	ENSMUSG00000022771.18	ENSMUST00000023455.14	2333	21	16214	0	16170	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCGTTCATGACCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	16912907	16904418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746
ENSMUSG00000022771.18_16904615_16915278_1	chr16	-	1726	15	ISM	ENSMUSG00000022771.18	ENSMUST00000023455.14	2333	21	13843	196	13799	-195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAAAGACACTTGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	16915278	16904614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219
ENSMUSG00000022771.18_16905045_16929063_1	chr16	-	1649	21	FSM	ENSMUSG00000022771.18	ENSMUST00000023455.14	2333	21	58	626	14	135	multi-exon	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATCAGGACCCCAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	16929063	16905044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ENSMUSG00000022774.14_31772970_31775772_1	chr16	+	310	3	ISM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	5639	1518	5546	-1518	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGACTACGATGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	31772969	31775772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_31773125_31775108_31775248_31775756
ENSMUSG00000022774.14_31773068_31775903_1	chr16	+	343	3	ISM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	5737	1387	5644	-1387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTGTCTCTGCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	31773067	31775903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_31773125_31775108_31775248_31775756
ENSMUSG00000022779.17_16688704_16705751_1	chr16	+	1738	13	ISM	ENSMUSG00000022779.17	ENSMUST00000023465.16	3073	18	59	5103	59	-5098	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGAAGGGTGATACCTT	NA	NA	NA	NA	NA	NA	NA	NA	16688703	16705751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16688920_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695
ENSMUSG00000022779.17_16688704_16705869_1	chr16	+	1856	13	ISM	ENSMUSG00000022779.17	ENSMUST00000023465.16	3073	18	59	4985	59	-4980	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACCCAAATCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	16688703	16705869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16688920_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695
ENSMUSG00000022779.17_16688829_16707415_1	chr16	+	1800	14	ISM	ENSMUSG00000022779.17	ENSMUST00000023465.16	3073	18	184	3439	184	-3434	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCGACTCAAGCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	16688828	16707415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16688920_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346
ENSMUSG00000022779.17_16695797_16708086_1	chr16	+	1779	14	ISM	ENSMUSG00000022779.17	ENSMUST00000023465.16	3073	18	7152	2768	7152	-2763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGAGAAAGTTCCACTAC	NA	NA	NA	NA	NA	NA	NA	NA	16695796	16708086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975
ENSMUSG00000022779.17_16697189_16709309_1	chr16	+	1788	14	ISM	ENSMUSG00000022779.17	ENSMUST00000023465.16	3073	18	8544	1545	8544	-1540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCATTGGATGACTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	16697188	16709309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218
ENSMUSG00000022779.17_16701306_16710528_1	chr16	+	1741	12	ISM	ENSMUSG00000022779.17	ENSMUST00000023465.16	3073	18	12661	326	12661	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTCTCCCCTTCCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	16701305	16710528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ENSMUSG00000022779.17_16701306_16710590_1	chr16	+	1803	12	ISM	ENSMUSG00000022779.17	ENSMUST00000023465.16	3073	18	12661	264	12661	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGCTGGTGGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	16701305	16710590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ENSMUSG00000022779.17_16701306_16710650_1	chr16	+	1863	12	ISM	ENSMUSG00000022779.17	ENSMUST00000023465.16	3073	18	12661	204	12661	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGGAGGCAGGGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	16701305	16710650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ENSMUSG00000022779.17_16702197_16710839_1	chr16	+	1836	11	ISM	ENSMUSG00000022779.17	ENSMUST00000023465.16	3073	18	13552	15	13552	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTCTGGAACAAAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	16702196	16710839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ENSMUSG00000022781.9_31838592_31842002_1	chr16	-	727	3	ISM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	56158	3484	56158	-3484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTAAGTTGTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	31842002	31838591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_31839085_31840591_31840730_31841906
ENSMUSG00000022781.9_31838831_31850449_1	chr16	-	737	5	ISM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	47711	3723	47711	-3723	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTTTGAAATGAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	31850449	31838830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401
ENSMUSG00000022781.9_31838966_31852717_1	chr16	-	785	6	ISM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	45443	3858	45443	-3858	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTAAAAGAAGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	31852717	31838965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604
ENSMUSG00000022781.9_31841937_31858737_1	chr16	-	732	7	ISM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	39423	6829	39423	-6829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCCATACCTCAACGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	31858737	31841936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616
ENSMUSG00000022783.12_16571454_16605185_1	chr16	-	1237	7	ISM	ENSMUSG00000022783.12	ENST00000313311.10	1607	10	41904	-1	41904	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTAAAACACTTGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	16605185	16571453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16571742_16584832_16584950_16595186_16595379_16598484_16598638_16599608_16599783_16601598_16601805_16605078
ENSMUSG00000022783.12_16571606_16610413_1	chr16	-	1215	8	ISM	ENSMUSG00000022783.12	ENST00000313311.10	1607	10	36676	151	36676	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCTTTACTCAGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	16610413	16571605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16571742_16584832_16584950_16595186_16595379_16598484_16598638_16599608_16599783_16601598_16601805_16605078_16605263_16610360
ENSMUSG00000022783.12_16571668_16610452_1	chr16	-	1192	8	ISM	ENSMUSG00000022783.12	ENST00000313311.10	1607	10	36637	213	36637	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATTCTCCTCGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	16610452	16571667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16571742_16584832_16584950_16595186_16595379_16598484_16598638_16599608_16599783_16601598_16601805_16605078_16605263_16610360
ENSMUSG00000022783.12_16571716_16610505_1	chr16	-	1197	8	ISM	ENSMUSG00000022783.12	ENST00000313311.10	1607	10	36584	261	36584	-261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTGCAGAGGGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	16610505	16571715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16571742_16584832_16584950_16595186_16595379_16598484_16598638_16599608_16599783_16601598_16601805_16605078_16605263_16610360
ENSMUSG00000022783.12_16584830_16646979_1	chr16	-	1292	8	ISM	ENSMUSG00000022783.12	ENST00000313311.10	1607	10	110	13375	110	-13375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAGAATTCACCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	16646979	16584829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16584950_16595186_16595379_16598484_16598638_16599608_16599783_16601598_16601805_16605078_16605263_16610360_16610528_16646883
ENSMUSG00000022783.12_16595187_16647145_1	chr16	-	1259	8	ISM	ENSMUSG00000022783.12	ENST00000313311.10	1607	10	-56	23732	32	-23732	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCTTTGGGGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	16647145	16595186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16595379_16598484_16598638_16599608_16599783_16601598_16601805_16605078_16605263_16610360_16610528_16646883_16646980_16647058
ENSMUSG00000022787.11_32070918_32075892_1	chr16	+	835	2	ISM	ENSMUSG00000022787.11	ENSMUST00000023474.4	1394	3	4847	9	4847	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCAACAGTAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	32070917	32075892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_32071137_32075276
ENSMUSG00000022788.17_16240327_16287706_1	chr16	-	1408	10	ISM	ENSMUSG00000022788.17	ENST00000682739.1	2747	17	90413	0	34380	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTCATAAACACATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	16287706	16240326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16240685_16241779_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567
ENSMUSG00000022788.17_16240327_16287709_1	chr16	-	1392	9	NNC	ENSMUSG00000022788.17	novel	2747	17	NA	NA	34377	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTCATAAACACATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	16287709	16240326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_16240685_16241779_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16271843_16272029_16279457_16279605_16279864_16279924_16287567
ENSMUSG00000022788.17_16240466_16292247_1	chr16	-	1426	11	ISM	ENSMUSG00000022788.17	ENST00000682739.1	2747	17	85872	139	29839	-39	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCTCCCTGGACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	16292247	16240465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16240685_16241779_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090
ENSMUSG00000022788.17_16240569_16292894_1	chr16	-	1338	12	ISM	ENSMUSG00000022788.17	ENST00000682739.1	2747	17	85225	242	29192	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGCAGACAATGAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	16292894	16240568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16240685_16241779_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879
ENSMUSG00000022788.17_16240603_16292972_1	chr16	-	1382	12	ISM	ENSMUSG00000022788.17	ENST00000682739.1	2747	17	85147	276	29114	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGCTGACCCAGTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	16292972	16240602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16240685_16241779_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879
ENSMUSG00000022788.17_16240671_16293006_1	chr16	-	1348	12	ISM	ENSMUSG00000022788.17	ENST00000682739.1	2747	17	85113	344	29080	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGACCATACCCCTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	16293006	16240670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16240685_16241779_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879
ENSMUSG00000022788.17_16241876_16301990_1	chr16	-	1384	13	ISM	ENSMUSG00000022788.17	ENST00000682739.1	2747	17	76129	1549	20096	-1449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGTACATGGAAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	16301990	16241875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953
ENSMUSG00000022788.17_16243686_16302035_1	chr16	-	1329	12	ISM	ENSMUSG00000022788.17	ENST00000682739.1	2747	17	76084	3359	20051	-3259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATAAGTGGATTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	16302035	16243685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953
ENSMUSG00000022788.17_16243726_16302098_1	chr16	-	1352	12	ISM	ENSMUSG00000022788.17	ENST00000682739.1	2747	17	76021	3399	19988	-3299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGTGGAAGATTGAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	16302098	16243725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953
ENSMUSG00000022788.17_16253873_16302253_1	chr16	-	1393	11	ISM	ENSMUSG00000022788.17	ENSMUST00000161188.9	2214	13	19833	303	19833	-303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGAAGTGCAAAGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	16302253	16253872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953
ENSMUSG00000022788.17_16254442_16308346_1	chr16	-	1353	11	ISM	ENSMUSG00000022788.17	ENST00000682739.1	2747	17	69773	14115	13740	-872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATGCAATCGCAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	16308346	16254441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953_16302257_16308286
ENSMUSG00000022788.17_16271900_16308473_1	chr16	-	1357	9	ISM	ENSMUSG00000022788.17	ENST00000682739.1	2747	17	69646	31573	13613	-18330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAGATATCTGGGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	16308473	16271899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953_16302257_16308286
ENSMUSG00000022788.17_16272003_16321958_1	chr16	-	1369	10	ISM	ENSMUSG00000022788.17	ENST00000682739.1	2747	17	56161	31676	128	-18433	internal_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGATTCAGCTTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	16321958	16272002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953_16302257_16308286_16308538_16321907
ENSMUSG00000022788.17_16279878_16377950_1	chr16	-	1355	9	ISM	ENSMUSG00000022788.17	ENST00000682739.1	2747	17	169	39551	133	-26308	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGAAAAATGGTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	16377950	16279877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953_16302257_16308286_16308538_16321907_16322081_16377900
ENSMUSG00000022788.17_16287568_16378075_1	chr16	-	1434	8	ISM	ENSMUSG00000022788.17	ENST00000682739.1	2747	17	44	47241	8	-33998	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATCTTTTATTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	16378075	16287567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953_16302257_16308286_16308538_16321907_16322081_16377900
ENSMUSG00000022789.16_16131061_16141619_1	chr16	-	1668	8	ISM	ENSMUSG00000022789.16	ENSMUST00000096229.11	3966	19	35183	964	34778	-50	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATGGAACCTAAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	16141619	16131060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485
ENSMUSG00000022789.16_16131247_16147825_1	chr16	-	1784	10	ISM	ENSMUSG00000022789.16	ENSMUST00000096229.11	3966	19	28977	1150	28572	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	NA	NA	NA	NA	NA	NA	NA	16147825	16131246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666
ENSMUSG00000022789.16_16131510_16149961_1	chr16	-	1666	11	ISM	ENSMUSG00000022789.16	ENSMUST00000096229.11	3966	19	26841	1413	26436	205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGACTATAATGCATGCAC	NA	NA	NA	NA	NA	NA	NA	NA	16149961	16131509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864
ENSMUSG00000022789.16_16131714_16134307_1	chr16	-	464	3	ISM	ENSMUSG00000022789.16	ENST00000547312.5	2358	19	42466	-1	42090	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCGTTACAAAACAAATCAC	NA	NA	NA	NA	NA	NA	NA	NA	16134307	16131713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16131908_16132127_16132288_16134197
ENSMUSG00000022789.16_16131714_16147875_1	chr16	-	1445	11	ISM	ENSMUSG00000022789.16	ENST00000547312.5	2358	19	28898	-1	28522	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCGTTACAAAACAAATCAC	NA	NA	NA	NA	NA	NA	NA	NA	16147875	16131713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666
ENSMUSG00000022789.16_16131851_16149998_1	chr16	-	1440	12	ISM	ENSMUSG00000022789.16	ENST00000547312.5	2358	19	26775	136	26399	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACTGTTTGATATCCA	NA	NA	NA	NA	NA	NA	NA	NA	16149998	16131850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864
ENSMUSG00000022789.16_16132224_16151753_1	chr16	-	1346	12	ISM	ENSMUSG00000022789.16	ENST00000547312.5	2358	19	25020	509	24644	-373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGCAGCTGTATAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	16151753	16132223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692
ENSMUSG00000022789.16_16132273_16151811_1	chr16	-	1355	12	ISM	ENSMUSG00000022789.16	ENST00000547312.5	2358	19	24962	558	24586	-422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATTTTTTGGTTAATC	NA	NA	NA	NA	NA	NA	NA	NA	16151811	16132272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692
ENSMUSG00000022789.16_16134257_16154787_1	chr16	-	1354	12	ISM	ENSMUSG00000022789.16	ENST00000547312.5	2358	19	21986	2542	21610	-2406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATTGAAAGACTTATCAA	NA	NA	NA	NA	NA	NA	NA	NA	16154787	16134256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716
ENSMUSG00000022789.16_16134513_16141512_1	chr16	-	430	6	ISM	ENSMUSG00000022789.16	ENSMUST00000230980.2	2151	19	35217	2662	34885	-2662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCAGCAAGTCCACAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	16141512	16134512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485
ENSMUSG00000022789.16_16134563_16141580_1	chr16	-	448	6	ISM	ENSMUSG00000022789.16	ENSMUST00000230980.2	2151	19	35149	2712	34817	-2712	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCTGAAGAATTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	16141580	16134562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485
ENSMUSG00000022789.16_16134573_16156505_1	chr16	-	1337	12	ISM	ENSMUSG00000022789.16	ENST00000547312.5	2358	19	20268	2858	19892	-2722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAACTTCAAAAGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	16156505	16134572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456
ENSMUSG00000022789.16_16134625_16141628_1	chr16	-	434	6	ISM	ENSMUSG00000022789.16	ENSMUST00000230980.2	2151	19	35101	2774	34769	-2774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATTGGAGACGGTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	16141628	16134624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485
ENSMUSG00000022789.16_16136625_16158931_1	chr16	-	1380	12	ISM	ENSMUSG00000022789.16	ENST00000547312.5	2358	19	17842	4910	17466	-4774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTGATTCCTAATCTAA	NA	NA	NA	NA	NA	NA	NA	NA	16158931	16136624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859
ENSMUSG00000022789.16_16139447_16164009_1	chr16	-	1438	12	ISM	ENSMUSG00000022789.16	ENST00000547312.5	2358	19	12764	7732	12388	-7596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTAGGGCATCATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	16164009	16139446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861
ENSMUSG00000022789.16_16141479_16176729_1	chr16	-	1363	11	ISM	ENSMUSG00000022789.16	ENST00000547312.5	2358	19	44	9764	0	-9628	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGACAGGGCTCACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	16176729	16141478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ENSMUSG00000022792.17_16120845_16125105_1	chr16	+	1123	4	ISM	ENSMUSG00000022792.17	ENSMUST00000059955.15	1574	5	3	2399	3	-1701	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACTGGAGGTCATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	16120844	16125105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073
ENSMUSG00000022792.17_16121048_16125244_1	chr16	+	1059	4	ISM	ENSMUSG00000022792.17	ENSMUST00000059955.15	1574	5	206	2260	206	-1562	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTTTTGTGATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	16121047	16125244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073
ENSMUSG00000022792.17_16121417_16127505_1	chr16	+	1000	5	FSM	ENSMUSG00000022792.17	ENSMUST00000059955.15	1574	5	575	-1	575	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAACAATCCTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	16121416	16127505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073_16125245_16127195
ENSMUSG00000022793.18_38572657_38589077_1	chr16	+	1572	6	ISM	ENSMUSG00000022793.18	ENSMUST00000114712.8	2168	7	10029	133	179	-131	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	992	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTATTAGTTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	38572656	38589077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_38572762_38574280_38574514_38578040_38578229_38583430_38583554_38586276_38586382_38588259
ENSMUSG00000022793.18_38574303_38589210_1	chr16	+	1578	5	ISM	ENSMUSG00000022793.18	ENSMUST00000114712.8	2168	7	11675	0	1825	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTTGGTCTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38574302	38589210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_38574514_38578040_38578229_38583430_38583554_38586276_38586382_38588259
ENSMUSG00000022793.18_38574330_38578084_1	chr16	+	226	2	ISM	ENSMUSG00000022793.18	ENST00000483209.5	1830	7	1852	11124	1852	-10362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTGGAAGCTCTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	38574329	38578084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_38574520_38578048
ENSMUSG00000022793.18_38574375_38578141_1	chr16	+	238	2	ISM	ENSMUSG00000022793.18	ENST00000483209.5	1830	7	1897	11067	1897	-10305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTGCCTGAGAATGACT	NA	NA	NA	NA	NA	NA	NA	NA	38574374	38578141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_38574520_38578048
ENSMUSG00000022793.18_38574435_38578188_1	chr16	+	225	2	ISM	ENSMUSG00000022793.18	ENST00000483209.5	1830	7	1957	11020	1957	-10258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCACTTGGTGGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	38574434	38578188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_38574520_38578048
ENSMUSG00000022800.15_32698151_32726149_1	chr16	+	1216	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	0	3096	0	149	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATGTATAAATAATGC	NA	NA	NA	NA	NA	NA	NA	NA	32698150	32726149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ENSMUSG00000022800.15_32698221_32726335_1	chr16	+	1230	8	FSM	ENSMUSG00000022800.15	ENSMUST00000171325.9	1792	8	62	500	62	335	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCCAGTTTTTAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	32698220	32726335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718770_32718841_32719247_32719310_32722788_32722916_32725901
ENSMUSG00000022800.15_32704494_32726359_1	chr16	+	1210	8	ISM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	6343	2886	1142	359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGTAAATCTTAAACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	32704493	32726359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ENSMUSG00000022800.15_32704520_32726438_1	chr16	+	1263	8	ISM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	6369	2807	1168	-397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACAGCTGCCTTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	32704519	32726438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ENSMUSG00000022800.15_32704602_32726468_1	chr16	+	1211	8	ISM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	6451	2777	1250	-367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAACTGTAGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	32704601	32726468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ENSMUSG00000022800.15_32711729_32726583_1	chr16	+	1211	7	ISM	ENSMUSG00000022800.15	ENSMUST00000232272.2	1852	10	13229	297	8377	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATTAAACTTTTAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	32711728	32726583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ENSMUSG00000022800.15_32715461_32726814_1	chr16	+	1279	5	ISM	ENSMUSG00000022800.15	ENSMUST00000171325.9	1792	8	17302	21	12109	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTTGACTTCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	32715460	32726814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_32715568_32718770_32718841_32719247_32719310_32722788_32722916_32725901
ENSMUSG00000022800.15_32718744_32726814_1	chr16	+	1274	5	ISM	ENSMUSG00000022800.15	ENSMUST00000232272.2	1852	10	20244	66	15392	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTTGACTTCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	32718743	32726814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ENSMUSG00000022800.15_32722840_32727030_1	chr16	+	1205	2	ISM	ENSMUSG00000022800.15	ENSMUST00000120345.2	648	6	19488	-1030	19488	150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATATATGTCACAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	32722839	32727030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_32722916_32725901
ENSMUSG00000022808.6_33071814_33110527_1	chr16	+	1020	11	ISM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	0	10112	0	-10112	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGCCAAGAAGCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	33071813	33110527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468
ENSMUSG00000022808.6_33084677_33112202_1	chr16	+	947	11	ISM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	12863	8437	12863	-8437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGCAGATAAATGAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	33084676	33112202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110
ENSMUSG00000022808.6_33087129_33115035_1	chr16	+	943	11	ISM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	15315	5604	15315	-5604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTGAACGCTTCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	33087128	33115035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010
ENSMUSG00000022808.6_33088387_33118820_1	chr16	+	927	11	ISM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	16573	1819	16573	-1819	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAAAGAATGCTTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	33088386	33118820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ENSMUSG00000022808.6_33088438_33118870_1	chr16	+	926	11	ISM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	16624	1769	16624	-1769	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATCAAAGCCCCAAAACG	NA	NA	NA	NA	NA	NA	NA	NA	33088437	33118870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ENSMUSG00000022808.6_33088492_33118917_1	chr16	+	919	11	ISM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	16678	1722	16678	-1722	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTTATACATAGAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	33088491	33118917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ENSMUSG00000022808.6_33101003_33119137_1	chr16	+	989	8	ISM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	29189	1502	29189	-1502	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTGCACCTCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	33101002	33119137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ENSMUSG00000022808.6_33108083_33119310_1	chr16	+	940	5	ISM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	36269	1329	36269	-1329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAAGGTTTTCTTCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	33108082	33119310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ENSMUSG00000022808.6_33110535_33119473_1	chr16	+	968	4	ISM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	38721	1166	38721	-1166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAGAAATTGCTATATAG	NA	NA	NA	NA	NA	NA	NA	NA	33110534	33119473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33110569_33112110_33112257_33115010_33115126_33118800
ENSMUSG00000022808.6_33112219_33119585_1	chr16	+	938	3	ISM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	40405	1054	40405	-1054	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGGGTACGAGGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	33112218	33119585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33112257_33115010_33115126_33118800
ENSMUSG00000022808.6_33115111_33119698_1	chr16	+	913	2	ISM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	43297	941	43297	-941	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAAATGATGTTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	33115110	33119698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33115126_33118800
ENSMUSG00000022809.5_38069626_38074160_1	chr16	-	715	6	ISM	ENSMUSG00000022809.5	ENST00000466380.6	1748	9	41148	125	41026	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGCACAGATGGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	38074160	38069625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38069752_38071134_38071241_38071489_38071607_38071755_38071899_38073189_38073354_38074101
ENSMUSG00000022809.5_38069690_38074200_1	chr16	-	691	6	ISM	ENSMUSG00000022809.5	ENST00000466380.6	1748	9	41108	189	40986	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCAGTTGCTGCGCATC	NA	NA	NA	NA	NA	NA	NA	NA	38074200	38069689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38069752_38071134_38071241_38071489_38071607_38071755_38071899_38073189_38073354_38074101
ENSMUSG00000022809.5_38069734_38074257_1	chr16	-	704	6	ISM	ENSMUSG00000022809.5	ENST00000466380.6	1748	9	41051	233	40929	-233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCCGTCCTCACTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	38074257	38069733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38069752_38071134_38071241_38071489_38071607_38071755_38071899_38073189_38073354_38074101
ENSMUSG00000022809.5_38071218_38074661_1	chr16	-	686	6	ISM	ENSMUSG00000022809.5	ENST00000466380.6	1748	9	40647	1717	40525	-1717	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTGGTAGACCAACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	38074661	38071217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38071241_38071489_38071607_38071755_38071899_38073189_38073354_38074101_38074290_38074610
ENSMUSG00000022809.5_38071490_38074747_1	chr16	-	749	5	ISM	ENSMUSG00000022809.5	ENST00000466380.6	1748	9	40561	1989	40439	-1989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGGCTTTCCCCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	38074747	38071489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38071607_38071755_38071899_38073189_38073354_38074101_38074290_38074610
ENSMUSG00000022809.5_38071814_38086370_1	chr16	-	666	5	ISM	ENSMUSG00000022809.5	ENST00000466380.6	1748	9	28938	2313	28816	-2313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGAAACGGGAACCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	38086370	38071813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38071899_38073189_38073354_38074101_38074290_38074610_38074745_38086275
ENSMUSG00000022809.5_38071864_38086424_1	chr16	-	670	5	ISM	ENSMUSG00000022809.5	ENST00000466380.6	1748	9	28884	2363	28762	-2363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGGCCACTTTTGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	38086424	38071863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38071899_38073189_38073354_38074101_38074290_38074610_38074745_38086275
ENSMUSG00000022809.5_38073297_38114941_1	chr16	-	657	5	ISM	ENSMUSG00000022809.5	ENST00000466380.6	1748	9	367	3796	245	-3796	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGCGACGGGAAAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	38114941	38073296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38073354_38074101_38074290_38074610_38074745_38086275_38086492_38114879
ENSMUSG00000022809.5_38073330_38115013_1	chr16	-	696	5	ISM	ENSMUSG00000022809.5	ENST00000466380.6	1748	9	295	3829	173	-3829	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGGCAGCATCTGGAACTA	NA	NA	NA	NA	NA	NA	NA	NA	38115013	38073329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38073354_38074101_38074290_38074610_38074745_38086275_38086492_38114879
ENSMUSG00000022809.5_38074191_38115083_1	chr16	-	653	4	ISM	ENSMUSG00000022809.5	ENST00000466380.6	1748	9	225	4690	103	-4690	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAAGAACAGCAGGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	38115083	38074190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38074290_38074610_38074745_38086275_38086492_38114879
ENSMUSG00000022809.5_38074237_38115186_1	chr16	-	710	4	ISM	ENSMUSG00000022809.5	ENST00000466380.6	1748	9	122	4736	0	-4736	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGGGAAAAGATTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	38115186	38074236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38074290_38074610_38074745_38086275_38086492_38114879
ENSMUSG00000022811.18_33201233_33277371_1	chr16	+	776	4	ISM	ENSMUSG00000022811.18	ENST00000492394.5	2944	8	-15	40600	0	-40355	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGACTGTGCTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	33201232	33277371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33201398_33247563_33247700_33254995_33255345_33277245
ENSMUSG00000022811.18_33201233_33317787_2	chr16	+	799	5	FSM	ENSMUSG00000022811.18	ENST00000468369.5	1008	5	12	197	0	61	multi-exon	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGCTGTACAGTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	33201232	33317787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_33201398_33241690_33241777_33288422_33288554_33315714_33315745_33317400
ENSMUSG00000022811.18_33201233_33317916_2	chr16	+	928	5	FSM	ENSMUSG00000022811.18	ENST00000468369.5	1008	5	12	68	0	-55	multi-exon	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCAAATGCATTACCTG	NA	NA	NA	NA	NA	NA	NA	NA	33201232	33317916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_33201398_33241690_33241777_33288422_33288554_33315714_33315745_33317400
ENSMUSG00000022811.18_33201335_33287279_1	chr16	+	729	5	ISM	ENSMUSG00000022811.18	ENST00000492394.5	2944	8	87	30692	87	-30447	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAGCACTGCAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	33201334	33287279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33201398_33247563_33247700_33254995_33255345_33277245_33277372_33287224
ENSMUSG00000022811.18_33201376_33287349_1	chr16	+	758	5	ISM	ENSMUSG00000022811.18	ENST00000492394.5	2944	8	128	30622	128	-30377	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAATTAAAATGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	33201375	33287349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33201398_33247563_33247700_33254995_33255345_33277245_33277372_33287224
ENSMUSG00000022811.18_33247563_33288553_1	chr16	+	820	5	ISM	ENSMUSG00000022811.18	ENSMUST00000089677.7	4032	9	26748	30460	26748	-29173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGCTGTGTCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	33247562	33288553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469
ENSMUSG00000022811.18_33247667_33315734_1	chr16	+	736	6	ISM	ENSMUSG00000022811.18	ENSMUST00000089677.7	4032	9	26852	3279	26852	-1992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAATGTGGTATGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	33247666	33315734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714
ENSMUSG00000022811.18_33254994_33315833_1	chr16	+	804	5	ISM	ENSMUSG00000022811.18	ENSMUST00000089677.7	4032	9	34179	3180	34179	-1893	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCAGACAGTTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	33254993	33315833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714
ENSMUSG00000022811.18_33255123_33316195_1	chr16	+	755	6	ISM	ENSMUSG00000022811.18	ENSMUST00000089677.7	4032	9	34308	2818	34308	-1531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAAAGGTGGCCTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	33255122	33316195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ENSMUSG00000022811.18_33255205_33316260_1	chr16	+	738	6	ISM	ENSMUSG00000022811.18	ENSMUST00000089677.7	4032	9	34390	2753	34390	-1466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGCCAAAAAAGAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	33255204	33316260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ENSMUSG00000022811.18_33255252_33316317_1	chr16	+	748	6	ISM	ENSMUSG00000022811.18	ENSMUST00000089677.7	4032	9	34437	2696	34437	-1409	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGTGCTGGACAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	33255251	33316317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ENSMUSG00000022811.18_33277281_33316430_1	chr16	+	733	5	ISM	ENSMUSG00000022811.18	ENSMUST00000089677.7	4032	9	56466	2583	56466	-1296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCACACTCATCAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	33277280	33316430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ENSMUSG00000022811.18_33277304_33316511_1	chr16	+	791	5	ISM	ENSMUSG00000022811.18	ENSMUST00000089677.7	4032	9	56489	2502	56489	-1215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAATAGTAAGAGAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	33277303	33316511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ENSMUSG00000022811.18_33288530_33316733_1	chr16	+	761	3	ISM	ENSMUSG00000022811.18	ENSMUST00000089677.7	4032	9	67715	2280	67715	-993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTTCTGAAGAAGAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	33288529	33316733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_33288554_33315714_33315834_33316115
ENSMUSG00000022812.15_37910443_38040520_1	chr16	+	1541	9	ISM	ENSMUSG00000022812.15	ENST00000650344.2	1731	10	22	20511	22	-20511	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCCAGACACTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	37910442	38040520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333
ENSMUSG00000022812.15_37910534_37964740_1	chr16	+	561	2	ISM	ENSMUSG00000022812.15	ENST00000650344.2	1731	10	113	96291	113	-96291	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATATCAAGCCAAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	37910533	37964740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37910976_37964621
ENSMUSG00000022812.15_37910650_38061141_1	chr16	+	1612	10	FSM	ENSMUSG00000022812.15	ENST00000650344.2	1731	10	229	-110	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCACTTTTCAGGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	37910649	38061141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38060863
ENSMUSG00000022812.15_38014295_38060939_1	chr16	+	520	5	ISM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	104932	5507	103645	-92	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGCCAGCTGCGCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	38014294	38060939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
ENSMUSG00000022812.15_38049070_38061287_1	chr16	+	493	2	ISM	ENSMUSG00000022812.15	ENSMUST00000114750.2	1750	12	138420	-146	138420	146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACGCCCCCACCGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	38049069	38061287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_38049139_38060863
ENSMUSG00000022814.7_33776295_33779444_1	chr16	-	1033	2	ISM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	7964	1143	7964	-1143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCACCCTAGTTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	33779444	33776294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_33777306_33779422
ENSMUSG00000022814.7_33776429_33780601_1	chr16	-	1047	3	ISM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	6807	1277	6807	-1277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGCCTCCTACAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	33780601	33776428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_33777306_33779422_33779538_33780546
ENSMUSG00000022814.7_33776483_33780662_1	chr16	-	1054	3	ISM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	6746	1331	6746	-1331	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCTAAGAGGGAAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	33780662	33776482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_33777306_33779422_33779538_33780546
ENSMUSG00000022814.7_33776526_33780722_1	chr16	-	1071	3	ISM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	6686	1374	6686	-1374	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATACAATGCACCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	33780722	33776525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_33777306_33779422_33779538_33780546
ENSMUSG00000022814.7_33776807_33782189_1	chr16	-	1041	4	ISM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	5219	1655	5219	-1655	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTTCATTCTACTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	33782189	33776806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938
ENSMUSG00000022814.7_33777054_33782435_1	chr16	-	1040	4	ISM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	4973	1902	4973	-1902	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAGAGAGACTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	33782435	33777053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938
ENSMUSG00000022814.7_33777135_33782526_1	chr16	-	1050	4	ISM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	4882	1983	4882	-1983	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGACAGAAGACACTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	33782526	33777134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938
ENSMUSG00000022814.7_33779422_33784295_1	chr16	-	1118	4	ISM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	3113	4270	3113	-4270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGATGCTCATAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	33784295	33779421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_33779538_33780546_33780723_33781938_33782611_33784141
ENSMUSG00000022814.7_33780648_33787373_1	chr16	-	1079	4	ISM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	35	5496	35	-5496	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACAGGAAGTGGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	33787373	33780647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_33780723_33781938_33782611_33784141_33784296_33787195
ENSMUSG00000022816.12_37636068_37643006_1	chr16	+	312	4	ISM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	38833	13870	38833	-13870	internal_fragment	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGTGGCTGGAAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	37636067	37643006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37636173_37639265_37639396_37641517_37641551_37642962
ENSMUSG00000022816.12_37639310_37647150_1	chr16	+	313	4	ISM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	42075	9726	42075	-9726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAGCCATCAACATCAC	NA	NA	NA	NA	NA	NA	NA	NA	37639309	37647150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37639396_37641517_37641551_37642962_37643094_37647087
ENSMUSG00000022816.12_37643064_37649181_1	chr16	+	262	3	ISM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	45829	7695	45829	-7695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACGTCCAATCTAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	37643063	37649181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37643094_37647087_37647207_37649068
ENSMUSG00000022816.12_37647172_37649586_1	chr16	+	259	3	ISM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	49937	7290	49937	-7290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCCATACTTAGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	37647171	37649586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37647207_37649068_37649182_37649475
ENSMUSG00000022816.12_37649065_37651995_1	chr16	+	305	3	ISM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	51830	4881	51830	-4881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGCAATCACAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	37649064	37651995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37649182_37649475_37649587_37651918
ENSMUSG00000022816.12_37649147_37654287_1	chr16	+	267	4	ISM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	51912	2589	51912	-2589	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAGGCACAGAGCACCG	NA	NA	NA	NA	NA	NA	NA	NA	37649146	37654287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37649182_37649475_37649587_37651918_37651996_37654243
ENSMUSG00000022816.12_37649509_37654345_1	chr16	+	257	3	ISM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	52274	2531	52274	-2531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACACACAGAGTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	37649508	37654345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37649587_37651918_37651996_37654243
ENSMUSG00000022816.12_37649541_37654415_1	chr16	+	295	3	ISM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	52306	2461	52306	-2461	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTTTGCAATAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	37649540	37654415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37649587_37651918_37651996_37654243
ENSMUSG00000022820.5_37467847_37474728_1	chr16	-	569	3	FSM	ENSMUSG00000022820.5	ENSMUST00000023514.4	971	3	87	315	87	-315	multi-exon	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTATTCATTGCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	37474728	37467846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_37468082_37469375_37469523_37474541
ENSMUSG00000022820.5_37467847_37474728_2	chr16	-	564	3	NNC	ENSMUSG00000022820.5	novel	971	3	NA	NA	87	-315	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTATTCATTGCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	37474728	37467846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_37468077_37469375_37469523_37474541
ENSMUSG00000022820.5_37467963_37474815_1	chr16	-	540	3	FSM	ENSMUSG00000022820.5	ENSMUST00000023514.4	971	3	0	431	0	-431	multi-exon	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTCTTTTTCTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	37474815	37467962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_37468082_37469375_37469523_37474541
ENSMUSG00000022822.17_20219511_20224514_1	chr16	-	1541	5	FSM	ENSMUSG00000022822.17	ENST00000382494.6	1662	5	121	0	121	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTATTTACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	20224514	20219510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_20220635_20221009_20221085_20223315_20223464_20224138_20224295_20224476
ENSMUSG00000022822.17_20219511_20224619_1	chr16	-	1646	5	FSM	ENSMUSG00000022822.17	ENST00000382494.6	1662	5	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTATTTACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	20224619	20219510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_20220635_20221009_20221085_20223315_20223464_20224138_20224295_20224476
ENSMUSG00000022828.11_37330152_37336224_1	chr16	-	2174	2	ISM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	23927	0	23927	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGTTATACTCACTAA	NA	NA	NA	NA	NA	NA	NA	NA	37336224	37330151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_37332182_37336080
ENSMUSG00000022828.11_37330152_37343149_1	chr16	-	2309	3	ISM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	17002	0	17002	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGTTATACTCACTAA	NA	NA	NA	NA	NA	NA	NA	NA	37343149	37330151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_37332182_37336080_37336323_37343112
ENSMUSG00000022828.11_37330308_37343204_1	chr16	-	2208	3	ISM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	16947	156	16947	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCATGGTTGTAGAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	37343204	37330307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_37332182_37336080_37336323_37343112
ENSMUSG00000022828.11_37330417_37343291_1	chr16	-	2186	3	ISM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	16860	265	16860	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTTGATGCGACTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	37343291	37330416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_37332182_37336080_37336323_37343112
ENSMUSG00000022828.11_37330627_37356244_1	chr16	-	2161	4	ISM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	3907	475	3907	-475	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAAGAACGTTTTAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	37356244	37330626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082
ENSMUSG00000022828.11_37330689_37356300_1	chr16	-	2155	4	ISM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	3851	537	3851	-537	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATAGTATTTTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	37356300	37330688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082
ENSMUSG00000022828.11_37330754_37356373_1	chr16	-	2163	4	ISM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	3778	602	3778	-602	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTATTCCTGAAGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	37356373	37330753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082
ENSMUSG00000022828.11_37331012_37360138_1	chr16	-	2211	5	FSM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	13	860	13	-860	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAAATCTCAGATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	37360138	37331011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356556_37360014
ENSMUSG00000022829.15_36954480_37203993_1	chr16	-	2928	23	FSM	ENSMUSG00000022829.15	ENST00000497029.5	3000	23	76	-4	76	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTGAAAAAGTATATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	37203993	36954479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_36954896_36960205_36960446_36977113_36977207_36994658_36994725_37007012_37007085_37008930_37009083_37020937_37021064_37024767_37024941_37028405_37028624_37030531_37030573_37035211_37035280_37036284_37036433_37056591_37056665_37061700_37061856_37068231_37068311_37076170_37076295_37082245_37082330_37108648_37108713_37111290_37111426_37143889_37143991_37150237_37150320_37165432_37165531_37203873
ENSMUSG00000022829.15_36954480_37204044_2	chr16	-	2969	23	NNC	ENSMUSG00000022829.15	novel	3000	23	NA	NA	25	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTGAAAAAGTATATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	37204044	36954479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_36954896_36960205_36960446_36977113_36977207_36994658_36994725_37007012_37007085_37008930_37009083_37020937_37021064_37024767_37024941_37028405_37028624_37030531_37030573_37035211_37035280_37036284_37036433_37056591_37056665_37061700_37061856_37068231_37068311_37076180_37076295_37082245_37082330_37108648_37108713_37111290_37111426_37143889_37143991_37150237_37150320_37165432_37165531_37203873
ENSMUSG00000022832.12_34470291_34498981_1	chr16	+	881	6	FSM	ENSMUSG00000022832.12	ENST00000405845.7	846	6	-27	-8	-27	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	7710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGGAATTCGTGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	34470290	34498981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_34470392_34487053_34487182_34490266_34490385_34491470_34491633_34497505_34497682_34498785
ENSMUSG00000022832.12_34470291_34498981_2	chr16	+	875	6	NNC	ENSMUSG00000022832.12	novel	846	6	NA	NA	-27	-7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGGAATTCGTGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	34470290	34498981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_34470392_34487059_34487182_34490266_34490385_34491470_34491633_34497505_34497682_34498785
ENSMUSG00000022833.8_34510986_34526886_1	chr16	+	856	7	ISM	ENSMUSG00000022833.8	ENST00000488653.6	2901	12	-35	17627	0	-17627	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGCTGTTGCAAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	34510985	34526886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34525198_34525418_34525530_34525626_34526756
ENSMUSG00000022833.8_34511080_34526939_1	chr16	+	815	7	ISM	ENSMUSG00000022833.8	ENST00000488653.6	2901	12	59	17574	-22	-17574	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAGAGAGCTCCCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	34511079	34526939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34525198_34525418_34525530_34525626_34526756
ENSMUSG00000022833.8_34511102_34526996_1	chr16	+	850	7	ISM	ENSMUSG00000022833.8	ENST00000488653.6	2901	12	81	17517	0	-17517	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCCAGCTCACGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	34511101	34526996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34525198_34525418_34525530_34525626_34526756
ENSMUSG00000022833.8_34511102_34545454_1	chr16	+	3881	13	FSM	ENSMUSG00000022833.8	ENSMUST00000231609.2	3999	13	0	118	0	-110	multi-exon	FALSE	canonical	NA	NA	NA	NA	2374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGGAGGGGTCTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34511101	34545454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ENSMUSG00000022833.8_34517182_34527184_1	chr16	+	886	5	ISM	ENSMUSG00000022833.8	ENST00000310351.8	2723	11	1224	17329	1224	-17329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGGCAGAAAATGTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	34517181	34527184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34517256_34517475_34517546_34525198_34525418_34525530_34525626_34526756
ENSMUSG00000022833.8_34525210_34529968_1	chr16	+	889	4	ISM	ENSMUSG00000022833.8	ENST00000310351.8	2723	11	9252	14545	9252	-14545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGTGGAAGTTGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	34525209	34529968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34525418_34525530_34525626_34526756_34527268_34529893
ENSMUSG00000022833.8_34525596_34541866_1	chr16	+	812	5	ISM	ENSMUSG00000022833.8	ENST00000310351.8	2723	11	9638	2647	9638	-2647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCAGGAGTTACTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	34525595	34541866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808
ENSMUSG00000022833.8_34526757_34542027_1	chr16	+	943	4	ISM	ENSMUSG00000022833.8	ENST00000310351.8	2723	11	10799	2486	10799	-2486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTATCTGTCTCTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	34526756	34542027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34527268_34529893_34530036_34535707_34535779_34541808
ENSMUSG00000022833.8_34526926_34542239_1	chr16	+	907	5	ISM	ENSMUSG00000022833.8	ENST00000310351.8	2723	11	10968	2274	10968	-2274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCCTTACTTCCCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	34526925	34542239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106
ENSMUSG00000022833.8_34527099_34543468_1	chr16	+	823	6	ISM	ENSMUSG00000022833.8	ENST00000310351.8	2723	11	11141	1045	11141	-1045	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCAATGTCTATGATCAA	NA	NA	NA	NA	NA	NA	NA	NA	34527098	34543468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ENSMUSG00000022833.8_34527154_34543518_1	chr16	+	818	6	ISM	ENSMUSG00000022833.8	ENST00000310351.8	2723	11	11196	995	11196	-995	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCATAATGAGCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	34527153	34543518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ENSMUSG00000022833.8_34527202_34543573_1	chr16	+	825	6	ISM	ENSMUSG00000022833.8	ENST00000310351.8	2723	11	11244	940	11244	-940	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGCTGCTTAACAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	34527201	34543573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ENSMUSG00000022833.8_34541904_34543953_1	chr16	+	831	3	ISM	ENSMUSG00000022833.8	ENST00000310351.8	2723	11	25946	560	25946	-560	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAGATGCACCCGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	34541903	34543953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34542028_34542106_34542240_34543379
ENSMUSG00000022833.8_34542145_34544108_1	chr16	+	824	2	ISM	ENSMUSG00000022833.8	ENST00000310351.8	2723	11	26187	405	26187	-405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCGTTCCAGTGAAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	34542144	34544108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34542240_34543379
ENSMUSG00000022837.15_36676695_36692715_1	chr16	+	701	5	ISM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	27925	360	27925	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCCAAAGGATGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	36676694	36692715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
ENSMUSG00000022841.16_20354230_20362806_1	chr16	+	2071	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTGGGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	20354229	20362806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361395_20361501_20362060
ENSMUSG00000022841.16_20354299_20362806_1	chr16	+	2002	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTGGGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	20354298	20362806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360503_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ENSMUSG00000022841.16_20354299_20362806_2	chr16	+	2003	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTGGGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	20354298	20362806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359730_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ENSMUSG00000022841.16_20354299_20362806_3	chr16	+	2004	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTGGGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	20354298	20362806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359964_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ENSMUSG00000022841.16_20354299_20362806_4	chr16	+	2004	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2547	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTGGGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	20354298	20362806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360951_20361045_20361388_20361501_20362060
ENSMUSG00000022841.16_20354299_20362806_5	chr16	+	2004	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTGGGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	20354298	20362806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359161_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ENSMUSG00000022841.16_20354299_20362806_6	chr16	+	2001	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTGGGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	20354298	20362806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361037_20361388_20361501_20362060
ENSMUSG00000022842.19_20448762_20449899_1	chr16	+	306	4	ISM	ENSMUSG00000022842.19	ENSMUST00000003898.12	3152	19	184	14766	21	-14133	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGAGTCTCTAGACCG	NA	NA	NA	NA	NA	NA	NA	NA	20448761	20449899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846
ENSMUSG00000022842.19_20448764_20463130_1	chr16	+	2188	18	ISM	ENSMUSG00000022842.19	ENST00000357474.9	2490	19	23	902	23	-902	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGCCTGCTGTGGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	20448763	20463130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20448796_20449101_20449325_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090
ENSMUSG00000022842.19_20449171_20463854_1	chr16	+	2188	18	ISM	ENSMUSG00000022842.19	ENST00000357474.9	2490	19	430	178	430	-178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCGACCCCCACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	20449170	20463854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20449325_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ENSMUSG00000022842.19_20449212_20463934_1	chr16	+	2226	18	NNC	ENSMUSG00000022842.19	novel	2490	19	NA	NA	471	-98	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	619	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCTGTCGGCTCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	20449211	20463934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_20449325_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457922_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ENSMUSG00000022842.19_20449221_20463920_1	chr16	+	2204	18	ISM	ENSMUSG00000022842.19	ENST00000357474.9	2490	19	480	112	480	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGGCACTTCGGCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	20449220	20463920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20449325_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ENSMUSG00000022842.19_20449269_20463973_1	chr16	+	2209	18	ISM	ENSMUSG00000022842.19	ENST00000357474.9	2490	19	528	59	528	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGTGGTAGACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	20449268	20463973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20449325_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ENSMUSG00000022842.19_20462967_20463968_1	chr16	+	297	3	ISM	ENSMUSG00000022842.19	ENST00000357474.9	2490	19	14226	64	14226	-64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGAGGTGTGGTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	20462966	20463968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20463009_20463090_20463187_20463809
ENSMUSG00000022844.9_35217682_35230743_1	chr16	-	644	5	ISM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	80500	0	80500	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGTAGAGTATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	35230743	35217681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663
ENSMUSG00000022844.9_35217868_35243262_1	chr16	-	637	7	ISM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	67981	186	67981	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACCTCAAGAGACTAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	35243262	35217867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235
ENSMUSG00000022844.9_35218689_35243372_1	chr16	-	664	6	ISM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	67871	1007	67871	-1007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTACGGGAAGCTCGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	35243372	35218688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235
ENSMUSG00000022844.9_35224383_35250174_1	chr16	-	643	6	ISM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	61069	6701	61069	-6701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGACTGCCTCTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	35250174	35224382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102
ENSMUSG00000022844.9_35228088_35258512_1	chr16	-	610	7	ISM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	52731	10406	52731	-10406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCGTGCTACATCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	35258512	35228087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482
ENSMUSG00000022844.9_35230664_35269833_1	chr16	-	662	7	ISM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	41410	12982	41410	-12982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTCTTGTTTTGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	35269833	35230663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772
ENSMUSG00000022844.9_35230769_35273861_1	chr16	-	598	8	ISM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	37382	13087	37382	-13087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCACATCTCAGCGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	35273861	35230768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820
ENSMUSG00000022844.9_35231297_35276511_1	chr16	-	640	8	ISM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	34732	13615	34732	-13615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTTCCTTTTCGGATT	NA	NA	NA	NA	NA	NA	NA	NA	35276511	35231296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465
ENSMUSG00000022844.9_35243318_35284750_1	chr16	-	617	9	ISM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	26493	25636	26493	-25636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTTTATCACCTGACCGA	NA	NA	NA	NA	NA	NA	NA	NA	35284750	35243317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704
ENSMUSG00000022844.9_35250131_35286935_1	chr16	-	611	9	ISM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	24308	32449	24308	-32449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGGACATCGTGGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	35286935	35250130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900
ENSMUSG00000022844.9_35258496_35311142_1	chr16	-	598	8	ISM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	101	40814	101	-40814	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGGCCACATTGTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	35311142	35258495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
ENSMUSG00000022844.9_35269772_35311243_1	chr16	-	645	7	ISM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	0	52090	0	-52090	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGAATGCTCCTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	35311243	35269771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
ENSMUSG00000022847.16_20544589_20545195_1	chr16	-	367	2	ISM	ENSMUSG00000022847.16	ENST00000650229.1	896	4	2341	346	2341	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCCTGGACTTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	20545195	20544588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_20544816_20545055
ENSMUSG00000022849.6_35621996_35637635_1	chr16	+	344	3	ISM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	31251	8283	31251	-8283	internal_fragment	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTCCCCCAGTTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	35621995	35637635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35622089_35634287_35634425_35637521
ENSMUSG00000022849.6_35634300_35639095_1	chr16	+	344	3	ISM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	43555	6823	43555	-6823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTCACCGTCAGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	35634299	35639095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35634425_35637521_35637694_35639048
ENSMUSG00000022855.10_21828285_21866004_1	chr16	+	2433	17	FSM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	51	2015	51	-2015	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCCAGAAGAAATGACGAT	NA	NA	NA	NA	NA	NA	NA	NA	21828284	21866004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ENSMUSG00000022855.10_21830241_21866211_1	chr16	+	2435	16	ISM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	2007	1808	2007	-1808	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCCATGTTAAGTCGTA	NA	NA	NA	NA	NA	NA	NA	NA	21830240	21866211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ENSMUSG00000022855.10_21837115_21866507_1	chr16	+	2440	13	ISM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	8881	1512	8881	-1512	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATCTTACAGGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	21837114	21866507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ENSMUSG00000022855.10_21842389_21866631_1	chr16	+	2502	12	ISM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	14155	1388	14155	-1388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGATAATTTTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	21842388	21866631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ENSMUSG00000022855.10_21846747_21866873_1	chr16	+	2445	10	ISM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	18513	1146	18513	-1146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCCAACCCGAGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	21846746	21866873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ENSMUSG00000022855.10_21855245_21867059_1	chr16	+	2426	7	ISM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	27011	960	27011	-960	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGAGCCCAGAAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	21855244	21867059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ENSMUSG00000022855.10_21855345_21867153_1	chr16	+	2420	7	ISM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	27111	866	27111	-866	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTACCTGACCAGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	21855344	21867153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ENSMUSG00000022855.10_21857285_21867278_1	chr16	+	2495	6	ISM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	29051	741	29051	-741	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTAAAGGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	21857284	21867278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ENSMUSG00000022855.10_21859298_21867466_1	chr16	+	2441	5	ISM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	31064	553	31064	-553	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCAGGATTGACTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	21859297	21867466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ENSMUSG00000022855.10_21861768_21867668_1	chr16	+	2419	3	ISM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	33534	351	33534	-351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTCTTATAGAAGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	21861767	21867668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_21861805_21862962_21863059_21865382
ENSMUSG00000022856.10_21753077_21766181_1	chr16	-	1238	5	FSM	ENSMUSG00000022856.10	ENSMUST00000023562.9	1360	5	121	1	121	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGCAGGTTCTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	21766181	21753076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21764750_21764905_21766117
ENSMUSG00000022857.14_78750712_78758988_1	chr16	-	458	4	ISM	ENSMUSG00000022857.14	ENSMUST00000060402.6	3681	27	128997	360	125792	-30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCCATAGCTTTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	78758988	78750711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78750844_78754197_78754341_78757427_78757524_78758901
ENSMUSG00000022857.14_78750768_78759041_1	chr16	-	455	4	ISM	ENSMUSG00000022857.14	ENSMUST00000060402.6	3681	27	128944	416	125739	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGCACTGCCTAATCAC	NA	NA	NA	NA	NA	NA	NA	NA	78759041	78750767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78750844_78754197_78754341_78757427_78757524_78758901
ENSMUSG00000022857.14_78750826_78759083_1	chr16	-	439	4	ISM	ENSMUSG00000022857.14	ENSMUST00000060402.6	3681	27	128902	474	125697	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATGTGCCAAGAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	78759083	78750825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78750844_78754197_78754341_78757427_78757524_78758901
ENSMUSG00000022857.14_78754279_78764939_1	chr16	-	454	4	ISM	ENSMUSG00000022857.14	ENSMUST00000060402.6	3681	27	123046	3927	119841	-3597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAACAGCTGCCAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	78764939	78754278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78754341_78757427_78757524_78758901_78759084_78764825
ENSMUSG00000022857.14_78757426_78765204_1	chr16	-	517	4	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	119576	6744	119576	-6744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTATCACATTTGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	78765204	78757425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78757524_78758901_78759084_78764825_78765013_78765154
ENSMUSG00000022857.14_78759026_78782826_1	chr16	-	455	5	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	101954	8344	101954	-8344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTCTCCTCAAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	78782826	78759025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78759084_78764825_78765013_78765154_78765205_78769067_78769164_78782762
ENSMUSG00000022857.14_78759066_78782895_1	chr16	-	484	5	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	101885	8384	101885	-8384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGGACAGCAGTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	78782895	78759065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78759084_78764825_78765013_78765154_78765205_78769067_78769164_78782762
ENSMUSG00000022857.14_78764899_78784591_1	chr16	-	453	5	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	100189	14217	100189	-14217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGACCGTCTGCTCTGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	78784591	78764898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78765013_78765154_78765205_78769067_78769164_78782762_78782896_78784531
ENSMUSG00000022857.14_78764980_78798657_1	chr16	-	456	6	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	86123	14298	86123	-14298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAAAGATCGTTGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	78798657	78764979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78765013_78765154_78765205_78769067_78769164_78782762_78782896_78784531_78784643_78798624
ENSMUSG00000022857.14_78769132_78800240_1	chr16	-	446	5	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	84540	18450	84540	-18450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGAGGTGGACCATTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	78800240	78769131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78769164_78782762_78782896_78784531_78784643_78798624_78798766_78800211
ENSMUSG00000022857.14_78782837_78803066_1	chr16	-	486	5	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	81714	32155	81714	-32155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGCATATAGCTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	78803066	78782836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78782896_78784531_78784643_78798624_78798766_78800211_78800338_78803017
ENSMUSG00000022857.14_78784587_78818344_1	chr16	-	483	5	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	66436	33905	66436	-33905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGTGATAGCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	78818344	78784586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78784643_78798624_78798766_78800211_78800338_78803017_78803108_78818274
ENSMUSG00000022857.14_78798714_78821230_1	chr16	-	458	5	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	63550	48032	63550	-48032	internal_fragment	TRUE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACTGTGATTTTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	78821230	78798713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78798766_78800211_78800338_78803017_78803108_78818274_78818411_78821176
ENSMUSG00000022857.14_78800302_78821686_1	chr16	-	458	5	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	63094	49620	63094	-49620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAACTTCATTTTCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	78821686	78800301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78800338_78803017_78803108_78818274_78818411_78821176_78821328_78821641
ENSMUSG00000022857.14_78818369_78832022_1	chr16	-	473	5	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	52758	67687	52758	-67687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGGATGATATAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	78832022	78818368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78818411_78821176_78821328_78821641_78821748_78831092_78831243_78831998
ENSMUSG00000022857.14_78821309_78850964_1	chr16	-	459	5	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	33816	70627	33816	-70627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTCTACAATTTAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	78850964	78821308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78821328_78821641_78821748_78831092_78831243_78831998_78832140_78850921
ENSMUSG00000022857.14_78821639_78851028_1	chr16	-	507	4	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	33752	70957	33752	-70957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTCCAGTCAGTCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	78851028	78821638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78821748_78831092_78831243_78831998_78832140_78850921
ENSMUSG00000022857.14_78821721_78854524_1	chr16	-	451	5	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	30256	71039	30256	-71039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGATGGAGAAGCGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	78854524	78821720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78821748_78831092_78831243_78831998_78832140_78850921_78851029_78854498
ENSMUSG00000022857.14_78831092_78854607_1	chr16	-	508	4	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	30173	80410	30173	-80410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTATATTTGTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	78854607	78831091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78831243_78831998_78832140_78850921_78851029_78854498
ENSMUSG00000022857.14_78831199_78859081_1	chr16	-	458	5	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	25699	80517	25699	-80517	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCCAGGATCTTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	78859081	78831198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78831243_78831998_78832140_78850921_78851029_78854498_78854608_78859024
ENSMUSG00000022857.14_78854580_78884685_1	chr16	-	451	6	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	95	103898	95	-103898	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGAGATTCTGGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	78884685	78854579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78854608_78859024_78859157_78870064_78870101_78875836_78875989_78884336_78884405_78884650
ENSMUSG00000022858.17_22064977_22069645_1	chr16	-	889	5	ISM	ENSMUSG00000022858.17	ENSMUST00000023564.10	1369	8	4352	-221	4352	221	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTGTATTATATATAGC	NA	NA	NA	NA	NA	NA	NA	NA	22069645	22064976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614
ENSMUSG00000022858.17_22065026_22069699_1	chr16	-	894	5	ISM	ENSMUSG00000022858.17	ENSMUST00000023564.10	1369	8	4298	-172	4298	172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAAATGCTTAATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	22069699	22065025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614
ENSMUSG00000022858.17_22065212_22073232_1	chr16	-	1003	7	ISM	ENSMUSG00000022858.17	ENSMUST00000023564.10	1369	8	765	14	765	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTCTTTCTAAATATC	NA	NA	NA	NA	NA	NA	NA	NA	22073232	22065211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157
ENSMUSG00000022858.17_22065340_22073309_1	chr16	-	952	7	ISM	ENSMUSG00000022858.17	ENSMUST00000023564.10	1369	8	688	142	688	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTTTCTATTGTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	22073309	22065339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157
ENSMUSG00000022858.17_22065451_22073776_1	chr16	-	895	8	FSM	ENSMUSG00000022858.17	ENSMUST00000023564.10	1369	8	221	253	221	-253	multi-exon	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTTTTCATTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	22073776	22065450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733
ENSMUSG00000022858.17_22065569_22084534_1	chr16	-	912	9	FSM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	221	2270	215	369	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGATATTGTTTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	22084534	22065568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
ENSMUSG00000022858.17_22065936_22073321_1	chr16	-	688	6	NNC	ENSMUSG00000022858.17	novel	947	7	NA	NA	676	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCTTGATGGGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	22073321	22065935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_22066014_22067185_22067246_22067799_22067884_22069614_22069724_22071352_22071546_22073157
ENSMUSG00000022858.17_22065936_22084650_1	chr16	-	845	7	NNC	ENSMUSG00000022858.17	novel	947	7	NA	NA	99	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2031	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCTTGATGGGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	22084650	22065935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_22066014_22067185_22067241_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22084490
ENSMUSG00000022858.17_22065936_22084650_2	chr16	-	984	8	ISM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	105	2637	99	2	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCTTGATGGGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	22084650	22065935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
ENSMUSG00000022858.17_22065936_22084650_3	chr16	-	850	7	FSM	ENSMUSG00000022858.17	ENST00000382191.4	947	7	99	-2	99	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCTTGATGGGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	22084650	22065935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22084490
ENSMUSG00000022858.17_22067186_22084755_1	chr16	-	877	6	ISM	ENSMUSG00000022858.17	ENST00000382191.4	947	7	-6	1248	0	-1248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCTAAAGGGTTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	22084755	22067185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22084490
ENSMUSG00000022858.17_22067800_22084755_1	chr16	-	817	5	ISM	ENSMUSG00000022858.17	ENST00000382191.4	947	7	-6	1862	0	-1862	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCAGTTCACACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	22084755	22067799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22084490
ENSMUSG00000022861.18_22287823_22300732_1	chr16	-	418	3	ISM	ENSMUSG00000022861.18	ENSMUST00000023578.14	2725	24	175239	-149	175009	149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGAGCCAATACCCATG	NA	NA	NA	NA	NA	NA	NA	NA	22300732	22287822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22288098_22298115_22298177_22300650
ENSMUSG00000022861.18_22287972_22319105_1	chr16	-	440	4	ISM	ENSMUSG00000022861.18	ENSMUST00000023578.14	2725	24	156866	0	156636	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAGGAAAGAAGAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	22319105	22287971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22288098_22298115_22298177_22300650_22300772_22318973
ENSMUSG00000022861.18_22319089_22376779_1	chr16	-	393	5	ISM	ENSMUSG00000022861.18	ENSMUST00000023578.14	2725	24	99192	31117	98962	-31117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCATGTACGGAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	22376779	22319088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22319152_22338294_22338386_22367401_22367467_22375075_22375237_22376766
ENSMUSG00000022861.18_22375205_22390477_1	chr16	-	405	6	ISM	ENSMUSG00000022861.18	ENST00000344484.8	3315	24	85264	88004	85264	-87233	internal_fragment	TRUE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAATTGAACAGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	22390477	22375204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22375237_22376766_22376857_22381447_22381534_22385164_22385245_22388912_22388973_22390420
ENSMUSG00000022861.18_22381456_22391437_1	chr16	-	399	5	ISM	ENSMUSG00000022861.18	ENST00000344484.8	3315	24	84304	94255	84304	-93484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATTGGTAAGGATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	22391437	22381455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22381534_22385164_22385245_22388912_22388973_22390420_22390514_22391349
ENSMUSG00000022861.18_22385165_22394150_1	chr16	-	439	5	ISM	ENSMUSG00000022861.18	ENST00000344484.8	3315	24	81591	97964	81591	-97193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTCCTCTTTTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	22394150	22385164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22385245_22388912_22388973_22390420_22390514_22391349_22391467_22394061
ENSMUSG00000022861.18_22388929_22395489_1	chr16	-	396	5	ISM	ENSMUSG00000022861.18	ENST00000344484.8	3315	24	80252	101728	80252	-100957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTGTAACTCAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	22395489	22388928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22388973_22390420_22390514_22391349_22391467_22394061_22394151_22395436
ENSMUSG00000022861.18_22391350_22398615_1	chr16	-	447	4	ISM	ENSMUSG00000022861.18	ENST00000344484.8	3315	24	77126	104149	77126	-103378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTCGGTGCCCAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	22398615	22391349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22391467_22394061_22394151_22395436_22395555_22398492
ENSMUSG00000022861.18_22395481_22407130_1	chr16	-	404	5	ISM	ENSMUSG00000022861.18	ENSMUST00000023578.14	2725	24	68841	107509	68611	-107509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCATGCTGATGGGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	22407130	22395480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22395555_22398492_22398616_22399272_22399348_22403184_22403235_22407048
ENSMUSG00000022861.18_22398566_22418637_1	chr16	-	400	5	ISM	ENSMUSG00000022861.18	ENSMUST00000023578.14	2725	24	57334	110594	57104	-110594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTACAGGAGTGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	22418637	22398565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22398616_22399272_22399348_22403184_22403235_22407048_22407220_22418583
ENSMUSG00000022861.18_22399292_22419262_1	chr16	-	412	5	ISM	ENSMUSG00000022861.18	ENST00000344484.8	3315	24	56479	112091	56479	-111320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACAGAGCTCAGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	22419262	22399291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_22399348_22403184_22403235_22407048_22407220_22418583_22418638_22419181
ENSMUSG00000022863.16_78157321_78161807_1	chr16	-	224	2	ISM	ENSMUSG00000022863.16	ENSMUST00000023570.14	1414	5	11891	573	11891	-573	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATTTGCTTATCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	78161807	78157320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_78157427_78161689
ENSMUSG00000022865.15_78122095_78133263_1	chr16	+	510	3	FSM	ENSMUSG00000022865.15	ENST00000400165.5	561	3	51	0	51	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCCTAATCTCAGTCGA	NA	NA	NA	NA	NA	NA	NA	NA	78122094	78133263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_78122212_78125841_78126047_78133075
ENSMUSG00000022865.15_78125913_78130268_1	chr16	+	153	2	ISM	ENSMUSG00000022865.15	ENST00000400166.5	877	4	3869	3155	3869	-2995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCGTGGATGGATCGG	NA	NA	NA	NA	NA	NA	NA	NA	78125912	78130268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_78126047_78130249
ENSMUSG00000022865.15_78126021_78130377_1	chr16	+	154	2	ISM	ENSMUSG00000022865.15	ENST00000400166.5	877	4	3977	3046	3977	-2886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAATGCCTACGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	78126020	78130377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_78126047_78130249
ENSMUSG00000022865.15_78130334_78133157_1	chr16	+	154	2	ISM	ENSMUSG00000022865.15	ENST00000400166.5	877	4	8290	266	8290	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCTCTAACATGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	78130333	78133157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_78130406_78133075
ENSMUSG00000022865.15_78130389_78133207_1	chr16	+	149	2	ISM	ENSMUSG00000022865.15	ENST00000400166.5	877	4	8345	216	8345	-56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAAGACTTTGAACGTG	NA	NA	NA	NA	NA	NA	NA	NA	78130388	78133207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_78130406_78133075
ENSMUSG00000022867.12_76810675_76912869_1	chr16	+	2076	11	NNC	ENSMUSG00000022867.12	novel	4772	25	NA	NA	-29	1	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTAAGCAGGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	76810674	76912869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_76811029_76830790_76830869_76834240_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76907953_76908034_76910620_76910745_76911771_76911968_76912277
ENSMUSG00000022867.12_76810675_76912869_2	chr16	+	2081	11	FSM	ENSMUSG00000022867.12	ENST00000351097.9	2051	11	-29	-1	-29	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTAAGCAGGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	76810674	76912869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76907953_76908034_76910620_76910745_76911771_76911968_76912277
ENSMUSG00000022867.12_76810675_76912869_3	chr16	+	2075	11	NNC	ENSMUSG00000022867.12	novel	4772	25	NA	NA	-29	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTAAGCAGGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	76810674	76912869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_76811029_76830796_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76907953_76908034_76910620_76910745_76911771_76911968_76912277
ENSMUSG00000022876.19_75656145_75685654_1	chr16	-	1200	7	ISM	ENSMUSG00000022876.19	ENSMUST00000114239.9	1890	8	20544	464	46	-36	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATGTGTTAAAGTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	75685654	75656144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_75656528_75667655_75667807_75670333_75670541_75673313_75673466_75675984_75676115_75680764_75680915_75685627
ENSMUSG00000022876.19_75656145_75685673_1	chr16	-	1219	7	ISM	ENSMUSG00000022876.19	ENSMUST00000114239.9	1890	8	20525	464	27	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATGTGTTAAAGTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	75685673	75656144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_75656528_75667655_75667807_75670333_75670541_75673313_75673466_75675984_75676115_75680764_75680915_75685627
ENSMUSG00000022876.19_75656145_75685676_1	chr16	-	1222	7	ISM	ENSMUSG00000022876.19	ENSMUST00000114239.9	1890	8	20522	464	24	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	854	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATGTGTTAAAGTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	75685676	75656144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_75656528_75667655_75667807_75670333_75670541_75673313_75673466_75675984_75676115_75680764_75680915_75685627
ENSMUSG00000022881.16_22932693_22946487_1	chr16	-	1222	11	NNC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATATACAATTTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	22946487	22932692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_22932858_22932936_22933054_22933200_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ENSMUSG00000022881.16_22932693_22946487_3	chr16	-	1221	11	NNC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATATACAATTTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	22946487	22932692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934602_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ENSMUSG00000022881.16_22932693_22946487_4	chr16	-	1222	11	NNC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATATACAATTTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	22946487	22932692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_22932858_22932936_22933054_22933194_22933266_22933352_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ENSMUSG00000022884.17_22926508_22929093_1	chr16	+	661	6	ISM	ENSMUSG00000022884.17	ENSMUST00000187168.7	1238	12	0	2841	0	-2841	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTTTATTTCTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	22926507	22929093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983
ENSMUSG00000022884.17_22927467_22929473_1	chr16	+	698	5	ISM	ENSMUSG00000022884.17	ENSMUST00000187168.7	1238	12	959	2461	958	-2461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTTGTTACAAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	22927466	22929473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329
ENSMUSG00000022884.17_22927467_22932886_1	chr16	+	1836	8	ISM	ENSMUSG00000022884.17	ENSMUST00000168891.8	2203	10	1238	-19	958	19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACCAAAAAAAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	22927466	22932886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ENSMUSG00000022884.17_22927981_22930342_1	chr16	+	680	6	ISM	ENSMUSG00000022884.17	ENSMUST00000187168.7	1238	12	1473	1592	-1340	-1592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTGCTCCTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	22927980	22930342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252
ENSMUSG00000022884.17_22929422_22932516_1	chr16	+	724	3	FSM	ENSMUSG00000022884.17	ENST00000471496.5	954	3	101	129	101	-129	multi-exon	FALSE	canonical	NA	NA	NA	NA	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTGGTATTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	22929421	22932516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_22929474_22930270_22930343_22931916
ENSMUSG00000022884.17_22929422_22932567_1	chr16	+	775	3	FSM	ENSMUSG00000022884.17	ENST00000471496.5	954	3	101	78	101	-78	multi-exon	FALSE	canonical	NA	NA	NA	NA	1577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGACCCTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	22929421	22932567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_22929474_22930270_22930343_22931916
ENSMUSG00000022884.17_22929422_22932680_1	chr16	+	888	3	FSM	ENSMUSG00000022884.17	ENST00000471496.5	954	3	101	-35	101	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	2646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTATATTCACTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	22929421	22932680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_22929474_22930270_22930343_22931916
ENSMUSG00000022884.17_22930566_22932516_1	chr16	+	681	2	ISM	ENSMUSG00000022884.17	ENSMUST00000023599.13	2208	11	4372	181	1245	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTGGTATTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	22930565	22932516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_22930647_22931916
ENSMUSG00000022885.17_23136395_23176422_1	chr16	+	470	5	FSM	ENSMUSG00000022885.17	ENST00000457772.6	1091	5	83	538	83	-538	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCCTCCCATCCAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	23136394	23176422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_23136449_23147091_23147190_23173615_23173715_23174958_23175134_23176378
ENSMUSG00000022885.17_23173640_23176604_1	chr16	+	476	3	ISM	ENSMUSG00000022885.17	ENST00000457772.6	1091	5	37328	356	37328	-356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAATCGCTGTTGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	23173639	23176604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_23173715_23174958_23175134_23176378
ENSMUSG00000022885.17_23174956_23176729_1	chr16	+	529	2	ISM	ENSMUSG00000022885.17	ENST00000457772.6	1091	5	38644	231	38644	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAATTTTGTTGGCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	23174955	23176729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_23175134_23176378
ENSMUSG00000022887.10_23288064_23295050_1	chr16	-	1526	3	ISM	ENSMUSG00000022887.10	ENST00000392472.6	2133	10	44470	-575	44348	575	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTAGTGCAAGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	23295050	23288063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_23289481_23293623_23293699_23295016
ENSMUSG00000022887.10_23288290_23303132_1	chr16	-	1515	5	ISM	ENSMUSG00000022887.10	ENST00000392472.6	2133	10	36388	-349	36266	349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTTGATGTAAGAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	23303132	23288289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_23289481_23293623_23293699_23295016_23295155_23302144_23302224_23303100
ENSMUSG00000022887.10_23288637_23339565_1	chr16	-	2180	10	FSM	ENSMUSG00000022887.10	ENST00000392472.6	2133	10	-45	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCGAGGGCTGTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	23339565	23288636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_23289481_23293623_23293699_23295016_23295155_23302144_23302224_23303100_23303220_23304351_23304500_23310671_23310869_23313371_23313504_23314829_23315008_23339295
ENSMUSG00000022887.10_23289355_23339353_1	chr16	-	1497	11	FSM	ENSMUSG00000022887.10	ENSMUST00000229619.2	3786	11	47	2242	45	-716	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGACAAGTGGTTCGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	23339353	23289354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_23289481_23293623_23293699_23295016_23295155_23302144_23302224_23303100_23303220_23304351_23304500_23310671_23310869_23313371_23313504_23314829_23315008_23332581_23332829_23339295
ENSMUSG00000022889.8_84515044_84520743_1	chr16	-	295	3	ISM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	11887	580	11887	-580	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAACATCCATGTTCGAAA	NA	NA	NA	NA	NA	NA	NA	NA	84520743	84515043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84515273_84517157_84517206_84520725
ENSMUSG00000022889.8_84515103_84520785_1	chr16	-	278	3	ISM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	11845	639	11845	-639	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACACATGGGAAAATACAC	NA	NA	NA	NA	NA	NA	NA	NA	84520785	84515102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84515273_84517157_84517206_84520725
ENSMUSG00000022889.8_84515221_84522042_1	chr16	-	284	4	ISM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	10588	757	10588	-757	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTAAAATTTAAACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	84522042	84515220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012
ENSMUSG00000022889.8_84520816_84527350_1	chr16	-	287	4	ISM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	5280	6352	5280	-6352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGTGTCAGCGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	84527350	84520815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84520880_84522012_84522079_84524371_84524485_84527306
ENSMUSG00000022889.8_84524432_84529285_1	chr16	-	277	4	ISM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	3345	9968	3345	-9968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTGAAACTCTGGACG	NA	NA	NA	NA	NA	NA	NA	NA	84529285	84524431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84524485_84527306_84527375_84527715_84527816_84529229
ENSMUSG00000022889.8_84527738_84531386_1	chr16	-	310	3	ISM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	1244	13274	1244	-13274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGAGCACCGGAAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	84531386	84527737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84527816_84529229_84529370_84531294
ENSMUSG00000022890.14_84624759_84631893_1	chr16	-	486	4	FSM	ENSMUSG00000022890.14	ENST00000400093.3	1115	4	609	20	498	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	84631893	84624758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_84624884_84625312_84625438_84628216_84628389_84631829
ENSMUSG00000022890.14_84624759_84632490_1	chr16	-	781	5	NNC	ENSMUSG00000022890.14	novel	809	5	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	84632490	84624758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_84624884_84625312_84625438_84628216_84628391_84631696_84631872_84632308
ENSMUSG00000022890.14_84625327_84632043_1	chr16	-	497	3	ISM	ENSMUSG00000022890.14	ENST00000400093.3	1115	4	459	588	348	-568	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAAATTTGATGGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	84632043	84625326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84625438_84628216_84628389_84631829
ENSMUSG00000022892.12_84751328_84837195_1	chr16	-	2171	11	ISM	ENSMUSG00000022892.12	ENST00000346798.8	3373	18	133400	22	133293	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTTCTTTGAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	84837195	84751327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138
ENSMUSG00000022892.12_84751532_84853326_1	chr16	-	2250	13	ISM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	117328	4959	117162	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAAAAAAAATTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84853326	84751531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211
ENSMUSG00000022892.12_84751751_84853322_1	chr16	-	1802	11	ISM	ENSMUSG00000022892.12	ENST00000354192.7	2959	15	117250	445	117166	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATCACTATGCATTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	84853322	84751750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84853211
ENSMUSG00000022892.12_84751781_84876840_1	chr16	-	2202	14	ISM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	93814	5208	93648	-249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTAGCTGCTTCTCCTACG	NA	NA	NA	NA	NA	NA	NA	NA	84876840	84751780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727
ENSMUSG00000022892.12_84752036_84810594_1	chr16	-	835	5	ISM	ENSMUSG00000022892.12	ENST00000358918.7	2367	17	159894	-115	159894	115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGTAATGTATTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	84810594	84752035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84752321_84759609_84759757_84762557_84762659_84774951_84775174_84810514
ENSMUSG00000022892.12_84752036_84876921_1	chr16	-	1803	12	ISM	ENSMUSG00000022892.12	ENST00000354192.7	2959	15	93651	730	93567	115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGTAATGTATTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	84876921	84752035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84853211_84853415_84876727
ENSMUSG00000022892.12_84752036_84917441_1	chr16	-	2295	17	ISM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	53213	5463	53047	115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGTAATGTATTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	84917441	84752035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417
ENSMUSG00000022892.12_84752151_84812248_1	chr16	-	869	6	ISM	ENSMUSG00000022892.12	ENST00000358918.7	2367	17	158240	0	158240	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTCATTTATAAAATAACG	NA	NA	NA	NA	NA	NA	NA	NA	84812248	84752150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84752321_84759609_84759757_84762557_84762659_84774951_84775174_84810514_84810615_84812119
ENSMUSG00000022892.12_84752151_84879776_1	chr16	-	1801	13	ISM	ENSMUSG00000022892.12	ENST00000354192.7	2959	15	90796	845	90712	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTCATTTATAAAATAACG	NA	NA	NA	NA	NA	NA	NA	NA	84879776	84752150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84853211_84853415_84876727_84876922_84879663
ENSMUSG00000022892.12_84752186_84917488_1	chr16	-	2192	17	ISM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	53166	5613	53000	-35	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGACAGCGAAACCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	84917488	84752185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417
ENSMUSG00000022892.12_84752238_84917562_1	chr16	-	2214	17	ISM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	53092	5665	52926	-87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGCAAATGCAGAACTAAG	NA	NA	NA	NA	NA	NA	NA	NA	84917562	84752237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417
ENSMUSG00000022892.12_84752257_84900179_1	chr16	-	1781	14	ISM	ENSMUSG00000022892.12	ENST00000354192.7	2959	15	70393	951	70309	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAACTTACAAGTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	84900179	84752256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84853211_84853415_84876727_84876922_84879663_84879777_84900093
ENSMUSG00000022892.12_84752291_84821822_1	chr16	-	811	7	ISM	ENSMUSG00000022892.12	ENST00000358918.7	2367	17	148666	140	148666	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTCTCCAAGATGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	84821822	84752290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84752321_84759609_84759757_84762557_84762659_84774951_84775174_84810514_84810615_84812119_84812249_84821740
ENSMUSG00000022892.12_84759628_84970449_1	chr16	-	2196	17	ISM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	205	13055	39	-7477	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGGCGTGGTGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	84970449	84759627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ENSMUSG00000022892.12_84759671_84970454_1	chr16	-	1765	14	ISM	ENSMUSG00000022892.12	ENST00000354192.7	2959	15	118	8365	34	-7520	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCACCCTGGTGATGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	84970454	84759670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84970389
ENSMUSG00000022892.12_84759683_84970593_1	chr16	-	2285	17	ISM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	61	13110	0	-7532	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGTGATTGTCATCACCC	NA	NA	NA	NA	NA	NA	NA	NA	84970593	84759682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ENSMUSG00000022892.12_84759695_84822353_1	chr16	-	816	7	ISM	ENSMUSG00000022892.12	ENST00000358918.7	2367	17	148135	7544	148135	-7544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTGTCATAGCAACCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	84822353	84759694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84759757_84762557_84762659_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310
ENSMUSG00000022892.12_84759717_84970593_1	chr16	-	1858	14	ISM	ENSMUSG00000022892.12	ENST00000354192.7	2959	15	-21	8411	0	-7566	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGGACTCATGGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	84970593	84759716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84970389
ENSMUSG00000022892.12_84759738_84970593_1	chr16	-	2230	17	ISM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	61	13165	0	-7587	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTTCGAACAAAGGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	84970593	84759737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ENSMUSG00000022892.12_84762600_84827171_1	chr16	-	796	7	ISM	ENSMUSG00000022892.12	ENST00000358918.7	2367	17	143317	10449	143317	-10449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGACATGATTCAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	84827171	84762599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_84762659_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119
ENSMUSG00000022893.15_85590715_85594715_1	chr16	-	2560	3	ISM	ENSMUSG00000022893.15	ENSMUST00000023610.15	4884	9	5286	0	5286	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGGCCATATTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	85594715	85590714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_85592989_85593526_85593703_85594605
ENSMUSG00000022893.15_85591182_85595550_1	chr16	-	2599	5	ISM	ENSMUSG00000022893.15	ENSMUST00000023610.15	4884	9	4451	467	4451	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTATTTCTAATGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	85595550	85591181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_85592989_85593526_85593703_85594605_85594782_85594891_85595079_85595297
ENSMUSG00000022893.15_85591744_85597212_1	chr16	-	2607	8	ISM	ENSMUSG00000022893.15	ENSMUST00000023610.15	4884	9	2789	1029	2789	-1029	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTCCTGATTTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	85597212	85591743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_85592989_85593526_85593703_85594605_85594782_85594891_85595079_85595297_85595585_85595933_85596102_85596423_85596557_85596977
ENSMUSG00000022895.17_95503152_95520735_1	chr16	+	2320	10	FSM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	210	1360	210	-1202	multi-exon	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTAATAGGTTATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	95503151	95520735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_95503512_95507287_95507360_95510815_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
ENSMUSG00000022895.17_95503322_95520900_1	chr16	+	2315	10	FSM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	380	1195	380	-1037	multi-exon	FALSE	canonical	NA	NA	NA	NA	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCTCTTGTTATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	95503321	95520900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_95503512_95507287_95507360_95510815_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
ENSMUSG00000022895.17_95503367_95521030_1	chr16	+	2400	10	FSM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	425	1065	425	-907	multi-exon	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCGGTATTTTTCTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	95503366	95521030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_95503512_95507287_95507360_95510815_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
ENSMUSG00000022895.17_95510901_95521265_1	chr16	+	2333	8	ISM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	7959	830	87	-672	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTCACTGGAAAAAAATATT	NA	NA	NA	NA	NA	NA	NA	NA	95510900	95521265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
ENSMUSG00000022895.17_95512761_95518940_1	chr16	+	878	6	ISM	ENSMUSG00000022895.17	ENST00000653642.1	3094	8	1947	2997	1947	-2997	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCCTGTCAATCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	95512760	95518940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_95512820_95513129_95513331_95515380_95515474_95516017_95516230_95517077_95517342_95518891
ENSMUSG00000022895.17_95512788_95521374_1	chr16	+	2327	7	ISM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	9846	721	1974	-563	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCAGCCTTGACCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	95512787	95521374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
ENSMUSG00000022895.17_95513229_95520060_1	chr16	+	884	6	ISM	ENSMUSG00000022895.17	ENST00000653642.1	3094	8	2415	1877	2415	-1877	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAAGACTTCGGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	95513228	95520060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_95513331_95515380_95515474_95516017_95516230_95517077_95517342_95518891_95519011_95519966
ENSMUSG00000022895.17_95513241_95521526_1	chr16	+	2336	6	ISM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	10299	569	2427	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAGAGCAAGCATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	95513240	95521526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
ENSMUSG00000022895.17_95513288_95520166_1	chr16	+	931	6	ISM	ENSMUSG00000022895.17	ENST00000653642.1	3094	8	2474	1771	2474	-1771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATACAGAAGACTGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	95513287	95520166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_95513331_95515380_95515474_95516017_95516230_95517077_95517342_95518891_95519011_95519966
ENSMUSG00000022895.17_95515405_95521627_1	chr16	+	2323	5	ISM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	12463	468	4591	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCTAGTTGTGAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	95515404	95521627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
ENSMUSG00000022895.17_95516073_95521757_1	chr16	+	2331	4	ISM	ENSMUSG00000022895.17	ENST00000653642.1	3094	8	5259	180	5259	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGAGGTCTTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	95516072	95521757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_95516230_95517077_95517342_95518891_95519011_95519966
ENSMUSG00000022895.17_95517247_95522089_1	chr16	+	2337	3	ISM	ENSMUSG00000022895.17	ENST00000360214.8	3245	8	6433	-1	6433	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGCCTCTTTGTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	95517246	95522089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_95517342_95518891_95519011_95519966
ENSMUSG00000022897.16_94370658_94412304_1	chr16	+	763	2	ISM	ENSMUSG00000022897.16	ENST00000647188.2	6086	12	119	83646	119	-80756	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCTTCCCCCACCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	94370657	94412304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94371394_94412277
ENSMUSG00000022897.16_94370722_94412343_1	chr16	+	738	2	ISM	ENSMUSG00000022897.16	ENSMUST00000119878.8	5759	12	-147	83583	-147	-80717	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGACGATGCATACAG	NA	NA	NA	NA	NA	NA	NA	NA	94370721	94412343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94371394_94412277
ENSMUSG00000022897.16_94370869_94460552_1	chr16	+	808	3	ISM	ENSMUSG00000022897.16	ENSMUST00000119878.8	5759	12	0	35374	0	-32508	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTTCATTATTATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	94370868	94460552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94371394_94412277_94412364_94460355
ENSMUSG00000022897.16_94371043_94466806_1	chr16	+	759	5	ISM	ENSMUSG00000022897.16	ENST00000647188.2	6086	12	504	29144	174	-26254	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGGCCAGGGGGACGATT	NA	NA	NA	NA	NA	NA	NA	NA	94371042	94466806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774
ENSMUSG00000022897.16_94371097_94466846_1	chr16	+	745	5	ISM	ENSMUSG00000022897.16	ENST00000647188.2	6086	12	558	29104	228	-26214	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTTACAATGATGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	94371096	94466846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774
ENSMUSG00000022897.16_94371179_94466936_1	chr16	+	753	5	ISM	ENSMUSG00000022897.16	ENST00000647188.2	6086	12	640	29014	-159	-26124	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAGGCAAAGGTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	94371178	94466936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774
ENSMUSG00000022897.16_94371338_94469811_1	chr16	+	769	6	ISM	ENSMUSG00000022897.16	ENST00000647188.2	6086	12	799	26139	0	-23249	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGCTCATCACGATGC	NA	NA	NA	NA	NA	NA	NA	NA	94371337	94469811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663
ENSMUSG00000022897.16_94412292_94472237_1	chr16	+	775	6	ISM	ENSMUSG00000022897.16	ENST00000647188.2	6086	12	41753	23713	40526	-20823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTGAGAAACACCAACT	NA	NA	NA	NA	NA	NA	NA	NA	94412291	94472237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161
ENSMUSG00000022897.16_94460474_94472392_1	chr16	+	740	5	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	89136	20668	88708	-20668	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGGAGTGCAATCAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	94460473	94472392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161
ENSMUSG00000022897.16_94464659_94474262_1	chr16	+	753	5	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	93321	18798	92893	-18798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTATCGACATGTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	94464658	94474262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195
ENSMUSG00000022897.16_94466853_94478365_1	chr16	+	748	5	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	95515	14695	95087	-14695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACCAAGCACCGAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	94466852	94478365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310
ENSMUSG00000022897.16_94466919_94478451_1	chr16	+	768	5	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	95581	14609	95153	-14609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAATGGGGGTGCACTTA	NA	NA	NA	NA	NA	NA	NA	NA	94466918	94478451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310
ENSMUSG00000022897.16_94469755_94486022_1	chr16	+	761	5	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	98417	7038	97989	-7038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGGATGCTTGATTATGA	NA	NA	NA	NA	NA	NA	NA	NA	94469754	94486022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893
ENSMUSG00000022897.16_94472320_94487354_1	chr16	+	741	5	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	100982	5706	100554	-5706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAACAGTGGGAGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	94472319	94487354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337
ENSMUSG00000022897.16_94472373_94487411_1	chr16	+	745	5	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	101035	5649	100607	-5649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCGCTGCTGCTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	94472372	94487411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337
ENSMUSG00000022897.16_94472427_94487462_1	chr16	+	742	5	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	101089	5598	100661	-5598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTTCCTAGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	94472426	94487462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337
ENSMUSG00000022897.16_94474197_94492470_1	chr16	+	750	5	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	102859	590	102431	-590	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGGCACTGAAGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	94474196	94492470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ENSMUSG00000022897.16_94474266_94492528_1	chr16	+	739	5	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	102928	532	102500	-532	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTCATGTAGCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	94474265	94492528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ENSMUSG00000022897.16_94474315_94492581_1	chr16	+	743	5	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	102977	479	102549	-479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCCATCACCACCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	94474314	94492581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ENSMUSG00000022897.16_94485934_94492800_1	chr16	+	753	3	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	114596	260	114168	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCTATCAGAACCGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	94485933	94492800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94486201_94487337_94487463_94492439
ENSMUSG00000022897.16_94486010_94492866_1	chr16	+	743	3	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	114672	194	114244	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTGACCGTCTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	94486009	94492866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94486201_94487337_94487463_94492439
ENSMUSG00000022897.16_94486070_94492915_1	chr16	+	732	3	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	114732	145	114304	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCCAACATACCAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	94486069	94492915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94486201_94487337_94487463_94492439
ENSMUSG00000022897.16_94487349_94493071_1	chr16	+	746	2	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	116011	-11	115583	11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTTTGTTTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	94487348	94493071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94487463_94492439
ENSMUSG00000022897.16_94487399_94493126_1	chr16	+	751	2	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	116061	-66	115633	66	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGCAAAGCTGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	94487398	94493126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_94487463_94492439
ENSMUSG00000022898.14_94298642_94303059_1	chr16	-	1572	3	ISM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	24630	0	24239	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGACTGCATATTGT	NA	NA	NA	NA	NA	NA	NA	NA	94303059	94298641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_94299942_94302393_94302547_94302940
ENSMUSG00000022898.14_94298759_94305246_1	chr16	-	1573	4	ISM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	22443	117	22052	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAACAATCTAGTACCCA	NA	NA	NA	NA	NA	NA	NA	NA	94305246	94298758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160
ENSMUSG00000022898.14_94298990_94311657_1	chr16	-	1473	6	ISM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	16032	348	15641	-348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCCCTGTACACCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	94311657	94298989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596
ENSMUSG00000022898.14_94299123_94313149_1	chr16	-	1490	7	ISM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	14540	481	14149	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCCTGTCCCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	94313149	94299122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088
ENSMUSG00000022898.14_94299184_94313190_1	chr16	-	1470	7	ISM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	14499	542	14108	-542	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGACTACTGGTAAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	94313190	94299183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088
ENSMUSG00000022898.14_94299243_94313232_1	chr16	-	1453	7	ISM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	14457	601	14066	-601	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCATATTCCCAGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	94313232	94299242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088
ENSMUSG00000022898.14_94299436_94327418_1	chr16	-	1482	8	FSM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	271	794	-120	-794	multi-exon	FALSE	canonical	NA	NA	NA	NA	1496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTGACTTCATCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	94327418	94299435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
ENSMUSG00000022898.14_94299594_94327561_1	chr16	-	1467	8	FSM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	128	952	128	-952	multi-exon	FALSE	canonical	NA	NA	NA	NA	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATTAAGCAGTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	94327561	94299593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
ENSMUSG00000022898.14_94299623_94327689_1	chr16	-	1566	8	FSM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	0	981	0	-981	multi-exon	FALSE	canonical	NA	NA	NA	NA	1470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCCAGATGTGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	94327689	94299622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
ENSMUSG00000022898.14_94302458_94327300_1	chr16	-	650	6	FSM	ENSMUSG00000022898.14	ENST00000398998.1	712	6	-2	64	-2	-64	multi-exon	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACATGGTCTTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	94327300	94302457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94327196
ENSMUSG00000022898.14_94302458_94327300_2	chr16	-	649	6	NNC	ENSMUSG00000022898.14	novel	712	6	NA	NA	-2	-64	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACATGGTCTTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	94327300	94302457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94327197
ENSMUSG00000022898.14_94302458_94327300_3	chr16	-	713	6	FSM	ENSMUSG00000022898.14	ENST00000476950.5	775	6	-2	64	-2	-64	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACATGGTCTTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	94327300	94302457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_94302547_94302940_94303092_94305160_94305236_94311596_94311747_94313088_94313233_94327196
ENSMUSG00000022899.11_36571503_36576675_1	chr16	-	1410	7	ISM	ENSMUSG00000022899.11	ENST00000489711.6	2927	21	28517	32	28507	-32	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCCTGGAAACCATAATT	NA	NA	NA	NA	NA	NA	NA	NA	36576675	36571502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_36572317_36572633_36572739_36573354_36573502_36574057_36574155_36574803_36574915_36576411_36576459_36576586
ENSMUSG00000022899.11_36571797_36579620_1	chr16	-	1442	10	ISM	ENSMUSG00000022899.11	ENST00000489711.6	2927	21	25572	326	25562	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTATTTGGAACCTATAGC	NA	NA	NA	NA	NA	NA	NA	NA	36579620	36571796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_36572317_36572633_36572739_36573354_36573502_36574057_36574155_36574803_36574915_36576411_36576459_36576586_36576752_36577483_36577619_36578141_36578224_36579587
ENSMUSG00000022899.11_36571960_36580483_1	chr16	-	1386	11	ISM	ENSMUSG00000022899.11	ENSMUST00000165531.9	2158	21	24699	-180	24699	180	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAGGATCCAAGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	36580483	36571959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_36572317_36572633_36572739_36573354_36573502_36574057_36574155_36574803_36574915_36576411_36576459_36576586_36576752_36577483_36577619_36578141_36578224_36579587_36579677_36580432
ENSMUSG00000022899.11_36572140_36582750_1	chr16	-	1491	14	ISM	ENSMUSG00000022899.11	ENST00000489711.6	2927	21	22442	669	22432	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCACTGGATGGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	36582750	36572139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_36572317_36572633_36572739_36573354_36573502_36574057_36574155_36574803_36574915_36576411_36576459_36576586_36576752_36577483_36577619_36578141_36578224_36579587_36579677_36580432_36580484_36581901_36582016_36582184_36582272_36582666
ENSMUSG00000022899.11_36572280_36592484_1	chr16	-	1409	15	ISM	ENSMUSG00000022899.11	ENST00000489711.6	2927	21	12708	809	12698	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGCCTGATCTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	36592484	36572279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_36572317_36572633_36572739_36573354_36573502_36574057_36574155_36574803_36574915_36576411_36576459_36576586_36576752_36577483_36577619_36578141_36578224_36579587_36579677_36580432_36580484_36581901_36582016_36582184_36582272_36582666_36582750_36592425
ENSMUSG00000022899.11_36572678_36592874_1	chr16	-	1438	15	ISM	ENSMUSG00000022899.11	ENST00000489711.6	2927	21	12318	1207	12308	-538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTATTGTGCTGATCGTG	NA	NA	NA	NA	NA	NA	NA	NA	36592874	36572677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_36572739_36573354_36573502_36574057_36574155_36574803_36574915_36576411_36576459_36576586_36576752_36577483_36577619_36578141_36578224_36579587_36579677_36580432_36580484_36581901_36582016_36582184_36582272_36582666_36582750_36592425_36592504_36592783
ENSMUSG00000022899.11_36573354_36595003_1	chr16	-	1478	15	ISM	ENSMUSG00000022899.11	ENST00000489711.6	2927	21	10189	1883	10179	-1214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGATTTTGCAAGTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	36595003	36573353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_36573502_36574057_36574155_36574803_36574915_36576411_36576459_36576586_36576752_36577483_36577619_36578141_36578224_36579587_36579677_36580432_36580484_36581901_36582016_36582184_36582272_36582666_36582750_36592425_36592504_36592783_36592875_36594903
ENSMUSG00000022899.11_36574087_36601960_1	chr16	-	1427	16	ISM	ENSMUSG00000022899.11	ENST00000489711.6	2927	21	3232	2616	3222	-1947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAACATATTTGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	36601960	36574086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_36574155_36574803_36574915_36576411_36576459_36576586_36576752_36577483_36577619_36578141_36578224_36579587_36579677_36580432_36580484_36581901_36582016_36582184_36582272_36582666_36582750_36592425_36592504_36592783_36592875_36594903_36595004_36595959_36596053_36601927
ENSMUSG00000022899.11_36574820_36602071_1	chr16	-	1454	15	ISM	ENSMUSG00000022899.11	ENST00000489711.6	2927	21	3121	3349	3111	-2680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTGCAAAGAGGAAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	36602071	36574819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_36574915_36576411_36576459_36576586_36576752_36577483_36577619_36578141_36578224_36579587_36579677_36580432_36580484_36581901_36582016_36582184_36582272_36582666_36582750_36592425_36592504_36592783_36592875_36594903_36595004_36595959_36596053_36601927
ENSMUSG00000022899.11_36576408_36602722_1	chr16	-	1450	15	ISM	ENSMUSG00000022899.11	ENST00000489711.6	2927	21	2470	4937	2460	-4268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCTGGGTCCTTCATAT	NA	NA	NA	NA	NA	NA	NA	NA	36602722	36576407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_36576459_36576586_36576752_36577483_36577619_36578141_36578224_36579587_36579677_36580432_36580484_36581901_36582016_36582184_36582272_36582666_36582750_36592425_36592504_36592783_36592875_36594903_36595004_36595959_36596053_36601927_36602070_36602633
ENSMUSG00000022899.11_36576686_36605154_1	chr16	-	1437	15	ISM	ENSMUSG00000022899.11	ENST00000489711.6	2927	21	38	5215	28	-4546	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACAACTTGTCTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	36605154	36576685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_36576752_36577483_36577619_36578141_36578224_36579587_36579677_36580432_36580484_36581901_36582016_36582184_36582272_36582666_36582750_36592425_36592504_36592783_36592875_36594903_36595004_36595959_36596053_36601927_36602070_36602633_36602722_36605016
ENSMUSG00000022900.15_36528665_36542708_1	chr16	+	864	4	ISM	ENSMUSG00000022900.15	ENST00000393631.5	1331	6	14116	3223	14116	-3223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCAGACTGGGACAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	36528664	36542708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_36528783_36529840_36529991_36541899_36542032_36542244
ENSMUSG00000022900.15_36541900_36542863_1	chr16	+	751	2	ISM	ENSMUSG00000022900.15	ENST00000393631.5	1331	6	27351	3068	27351	-3068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTGAAGAGGAGAAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	36541899	36542863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_36542032_36542244
ENSMUSG00000022900.15_36541934_36542936_1	chr16	+	790	2	ISM	ENSMUSG00000022900.15	ENST00000393631.5	1331	6	27385	2995	27385	-2995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTCTCCAAACTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	36541933	36542936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_36542032_36542244
ENSMUSG00000022900.15_36541976_36542996_1	chr16	+	808	2	ISM	ENSMUSG00000022900.15	ENST00000393631.5	1331	6	27427	2935	27427	-2935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGGCAAGAACAACAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	36541975	36542996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_36542032_36542244
ENSMUSG00000022900.15_36542320_36545931_1	chr16	+	775	2	ISM	ENSMUSG00000022900.15	ENST00000393631.5	1331	6	27771	0	27771	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTGCTTCTTGGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	36542319	36545931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_36543042_36545878
ENSMUSG00000022901.14_36438730_36441244_1	chr16	-	438	2	ISM	ENSMUSG00000022901.14	ENST00000393627.6	720	4	21748	0	21748	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTCAATGAAGATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	36441244	36438729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_36438989_36441065
ENSMUSG00000022901.14_36438919_36462952_1	chr16	-	491	4	FSM	ENSMUSG00000022901.14	ENST00000393627.6	720	4	40	189	40	-189	multi-exon	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTCTAAGCAAGGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	36462952	36438918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_36438989_36441065_36441402_36449331_36449382_36462917
ENSMUSG00000022905.13_35820557_35843623_1	chr16	+	996	9	ISM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	16872	13878	16872	-13878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGAACAAGTGGTAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	35820556	35843623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544
ENSMUSG00000022905.13_35833306_35853739_1	chr16	+	988	9	ISM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	29621	3762	29621	-3762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCCAAACGAAACGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	35833305	35853739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621
ENSMUSG00000022905.13_35842014_35854491_1	chr16	+	918	6	ISM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	38329	3010	38329	-3010	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCCCACTCTCTTATGG	NA	NA	NA	NA	NA	NA	NA	NA	35842013	35854491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ENSMUSG00000022905.13_35851559_35854818_1	chr16	+	1016	3	ISM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	47874	2683	47874	-2683	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTCTTTCCTCTAATGG	NA	NA	NA	NA	NA	NA	NA	NA	35851558	35854818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35851668_35853621_35853801_35854090
ENSMUSG00000022905.13_35853743_35855033_1	chr16	+	1001	2	ISM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	50058	2468	50058	-2468	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCTTAGGATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	35853742	35855033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35853801_35854090
ENSMUSG00000022911.12_62615320_62651178_1	chr16	-	1749	10	NNC	ENSMUSG00000022911.12	novel	1844	11	NA	NA	15964	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGTACCCAAGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	62651178	62615319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_62615814_62615957_62616072_62622084_62622154_62623082_62623193_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647528_62647777_62651105
ENSMUSG00000022911.12_62615320_62651178_2	chr16	-	1747	10	NNC	ENSMUSG00000022911.12	novel	1844	11	NA	NA	15964	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGTACCCAAGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	62651178	62615319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_62615814_62615957_62616072_62622084_62622154_62623082_62623189_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105
ENSMUSG00000022911.12_62615320_62667142_1	chr16	-	1844	11	FSM	ENSMUSG00000022911.12	ENST00000471138.5	1844	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGTACCCAAGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	62667142	62615319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_62615814_62615957_62616072_62622084_62622154_62623082_62623193_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
ENSMUSG00000022911.12_62615320_62667142_2	chr16	-	1842	11	NNC	ENSMUSG00000022911.12	novel	1844	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGTACCCAAGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	62667142	62615319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_62615814_62615957_62616072_62622084_62622154_62623082_62623193_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667049
ENSMUSG00000022911.12_62615716_62667142_1	chr16	-	1197	7	NNC	ENSMUSG00000022911.12	novel	1140	7	NA	NA	0	62	intron_retention	FALSE	canonical	NA	NA	NA	NA	1021	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAAAAACCTCACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	62667142	62615715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_62616072_62623082_62623193_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62667052
ENSMUSG00000022911.12_62615716_62667142_2	chr16	-	1199	7	NNC	ENSMUSG00000022911.12	novel	1140	7	NA	NA	0	62	intron_retention	FALSE	canonical	NA	NA	NA	NA	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAAAAACCTCACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	62667142	62615715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_62616072_62623082_62623186_62624195_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62667047
ENSMUSG00000022911.12_62615716_62667142_3	chr16	-	1194	7	NNC	ENSMUSG00000022911.12	novel	1140	7	NA	NA	0	62	intron_retention	FALSE	canonical	NA	NA	NA	NA	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAAAAACCTCACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	62667142	62615715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_62616072_62623082_62623193_62624199_62624426_62626904_62627011_62632211_62632415_62633529_62633628_62667047
ENSMUSG00000022911.12_62615716_62667142_4	chr16	-	1202	7	FSM	ENSMUSG00000022911.12	ENST00000486562.2	1140	7	0	-62	0	62	multi-exon	FALSE	canonical	NA	NA	NA	NA	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAAAAACCTCACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	62667142	62615715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_62616072_62623082_62623193_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62667047
ENSMUSG00000022912.9_62720754_62730396_1	chr16	+	474	5	ISM	ENSMUSG00000022912.9	ENST00000647936.1	1755	13	14973	18206	14973	-18206	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATGAATTATTATACTT	NA	NA	NA	NA	NA	NA	NA	NA	62720753	62730396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360
ENSMUSG00000022912.9_62720970_62734232_1	chr16	+	514	5	ISM	ENSMUSG00000022912.9	ENST00000647936.1	1755	13	15189	14370	15189	-14370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAATTGGCTCCTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	62720969	62734232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160
ENSMUSG00000022912.9_62730405_62739941_1	chr16	+	496	4	ISM	ENSMUSG00000022912.9	ENST00000647936.1	1755	13	24624	8661	24624	-8661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAATAATTGAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	62730404	62739941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_62730477_62734160_62734351_62738437_62738606_62739875
ENSMUSG00000022912.9_62734248_62744932_1	chr16	+	494	4	ISM	ENSMUSG00000022912.9	ENST00000647936.1	1755	13	28467	3670	28467	-3670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCACTGGCACTGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	62734247	62744932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_62734351_62738437_62738606_62739875_62740045_62744878
ENSMUSG00000022912.9_62738510_62748450_1	chr16	+	469	4	ISM	ENSMUSG00000022912.9	ENST00000647936.1	1755	13	32729	152	32729	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATCAATGGGGTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	62738509	62748450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_62738606_62739875_62740045_62744878_62745028_62748395
ENSMUSG00000022912.9_62738562_62748545_1	chr16	+	512	4	ISM	ENSMUSG00000022912.9	ENST00000647936.1	1755	13	32781	57	32781	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTTTAGACTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	62738561	62748545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_62738606_62739875_62740045_62744878_62745028_62748395
ENSMUSG00000022912.9_62739944_62746757_1	chr16	+	317	3	ISM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	65274	2952	34163	-1845	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATCCCAACTGAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	62739943	62746757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_62740045_62744878_62745028_62746690
ENSMUSG00000022912.9_62740003_62746822_1	chr16	+	323	3	ISM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	65333	2887	34222	-1780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTCATTTACTCTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	62740002	62746822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_62740045_62744878_62745028_62746690
ENSMUSG00000022912.9_62744972_62748456_1	chr16	+	343	3	ISM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	70302	1253	39191	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGGGTGCAGTTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	62744971	62748456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_62745028_62746690_62746917_62748395
ENSMUSG00000022912.9_62746851_62748648_1	chr16	+	319	2	ISM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	72181	1061	41070	46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTAAATATGACGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	62746850	62748648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_62746917_62748395
ENSMUSG00000022913.17_95781133_95785060_1	chr16	-	384	3	ISM	ENSMUSG00000022913.17	ENSMUST00000023630.16	1044	7	7100	0	7030	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAACTTTATTTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	95785060	95781132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_95781312_95783301_95783439_95784992
ENSMUSG00000022913.17_95781237_95788555_1	chr16	-	474	4	ISM	ENSMUSG00000022913.17	ENSMUST00000023630.16	1044	7	3605	104	3535	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGGTGGCCAGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	95788555	95781236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_95781312_95783301_95783439_95784992_95785192_95788492
ENSMUSG00000022913.17_95783302_95789227_1	chr16	-	467	4	ISM	ENSMUSG00000022913.17	ENSMUST00000023630.16	1044	7	2933	2169	2863	-2065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGTTGCGGCTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	95789227	95783301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_95783439_95784992_95785192_95788492_95788556_95789159
ENSMUSG00000022913.17_95785070_95791975_1	chr16	-	466	5	ISM	ENSMUSG00000022913.17	ENSMUST00000023630.16	1044	7	185	3937	115	-3833	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCAGACATTCAAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	95791975	95785069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_95785192_95788492_95788556_95789159_95789312_95790691_95790799_95791953
ENSMUSG00000022914.18_95869422_95883380_1	chr16	-	555	4	ISM	ENSMUSG00000022914.18	ENSMUST00000113827.4	2382	5	346	1554	248	-1554	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCACTCATAACTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	95883380	95869421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_95869828_95883013_95883074_95883177_95883208_95883321
ENSMUSG00000022914.18_95869669_95883628_1	chr16	-	483	5	FSM	ENSMUSG00000022914.18	ENSMUST00000113827.4	2382	5	98	1801	0	-1801	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAAGAAGTGTTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	95883628	95869668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ENSMUSG00000022935.17_87709556_87720028_1	chr16	-	517	3	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	133036	0	133036	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCCTGCATCTATTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	87720028	87709555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87709758_87711041_87711293_87719964
ENSMUSG00000022935.17_87709636_87732819_1	chr16	-	633	4	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	120245	80	120245	-80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAGCCCTCAGTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	87732819	87709635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87709758_87711041_87711293_87719964_87720191_87732785
ENSMUSG00000022935.17_87709737_87732956_1	chr16	-	669	4	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	120108	181	120108	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCAGTGTAAACAAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	87732956	87709736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87709758_87711041_87711293_87719964_87720191_87732785
ENSMUSG00000022935.17_87711147_87737458_1	chr16	-	623	4	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	115606	1591	115606	-1591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGGGGTATCTTCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	87737458	87711146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87711293_87719964_87720191_87732785_87733004_87737425
ENSMUSG00000022935.17_87711209_87737498_1	chr16	-	601	4	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	115566	1653	115566	-1653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGGAAATGGCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	87737498	87711208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87711293_87719964_87720191_87732785_87733004_87737425
ENSMUSG00000022935.17_87711263_87737544_1	chr16	-	593	4	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	115520	1707	115520	-1707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTCTTCAACTACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	87737544	87711262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87711293_87719964_87720191_87732785_87733004_87737425
ENSMUSG00000022935.17_87720023_87743523_1	chr16	-	596	4	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	109541	10467	109541	-10467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCAGATCGGGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	87743523	87720022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87720191_87732785_87733004_87737425_87737545_87743432
ENSMUSG00000022935.17_87720087_87743588_1	chr16	-	597	4	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	109476	10531	109476	-10531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGACTACGCCCTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	87743588	87720086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87720191_87732785_87733004_87737425_87737545_87743432
ENSMUSG00000022935.17_87720144_87743633_1	chr16	-	585	4	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	109431	10588	109431	-10588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACAGCAGAGCGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	87743633	87720143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87720191_87732785_87733004_87737425_87737545_87743432
ENSMUSG00000022935.17_87732798_87744732_1	chr16	-	600	4	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	108332	23242	108332	-23242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTCTTCAAGGTAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	87744732	87732797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87733004_87737425_87737545_87743432_87743657_87744681
ENSMUSG00000022935.17_87732852_87744781_1	chr16	-	595	4	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	108283	23296	108283	-23296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGCCAAACAAACCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	87744781	87732851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87733004_87737425_87737545_87743432_87743657_87744681
ENSMUSG00000022935.17_87732906_87744837_1	chr16	-	597	4	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	108227	23350	108227	-23350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCTTCTTGACAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	87744837	87732905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87733004_87737425_87737545_87743432_87743657_87744681
ENSMUSG00000022935.17_87732972_87746954_1	chr16	-	618	5	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	106110	23416	106110	-23416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAGTTGGAGGAATATG	NA	NA	NA	NA	NA	NA	NA	NA	87746954	87732971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87733004_87737425_87737545_87743432_87743657_87744681_87744886_87746915
ENSMUSG00000022935.17_87743588_87792871_1	chr16	-	609	6	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	60193	34032	60193	-34032	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATGACTCTGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	87792871	87743587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87743657_87744681_87744886_87746915_87747030_87752176_87752222_87754377_87754486_87792802
ENSMUSG00000022935.17_87743605_87792872_1	chr16	-	593	6	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	60192	34049	60192	-34049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGACTTCTCCAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	87792872	87743604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87743657_87744681_87744886_87746915_87747030_87752176_87752222_87754377_87754486_87792802
ENSMUSG00000022935.17_87743634_87792935_1	chr16	-	627	6	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	60129	34078	60129	-34078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCACCATCACGTATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	87792935	87743633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87743657_87744681_87744886_87746915_87747030_87752176_87752222_87754377_87754486_87792802
ENSMUSG00000022935.17_87744731_87803280_1	chr16	-	610	6	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	49784	35175	49784	-35175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGACAAAGGGGAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	87803280	87744730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87744886_87746915_87747030_87752176_87752222_87754377_87754486_87792802_87792947_87803236
ENSMUSG00000022935.17_87744790_87803325_1	chr16	-	596	6	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	49739	35234	49739	-35234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTAGGTTTCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	87803325	87744789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87744886_87746915_87747030_87752176_87752222_87754377_87754486_87792802_87792947_87803236
ENSMUSG00000022935.17_87744841_87803378_1	chr16	-	598	6	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	49686	35285	49686	-35285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGACAGATTTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	87803378	87744840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87744886_87746915_87747030_87752176_87752222_87754377_87754486_87792802_87792947_87803236
ENSMUSG00000022935.17_87746968_87831123_1	chr16	-	668	7	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	21941	37412	21941	-37412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATCACAGATTCGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	87831123	87746967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87747030_87752176_87752222_87754377_87754486_87792802_87792947_87803236_87803411_87806592_87806647_87831042
ENSMUSG00000022935.17_87754377_87831224_1	chr16	-	663	5	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	21840	44821	21840	-44821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCCTGGATGATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	87831224	87754376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87754486_87792802_87792947_87803236_87803411_87806592_87806647_87831042
ENSMUSG00000022935.17_87792838_87848309_1	chr16	-	606	5	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	4755	83282	4755	-83282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGGACCCAGATTTATG	NA	NA	NA	NA	NA	NA	NA	NA	87848309	87792837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87792947_87803236_87803411_87806592_87806647_87831042_87831225_87848222
ENSMUSG00000022935.17_87792888_87848365_1	chr16	-	612	5	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	4699	83332	4699	-83332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGCTGACCGTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	87848365	87792887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87792947_87803236_87803411_87806592_87806647_87831042_87831225_87848222
ENSMUSG00000022935.17_87792927_87848437_1	chr16	-	645	5	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	4627	83371	4627	-83371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGCTGTGTACATGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	87848437	87792926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87792947_87803236_87803411_87806592_87806647_87831042_87831225_87848222
ENSMUSG00000022935.17_87803361_87852953_1	chr16	-	602	5	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	111	93805	111	-93805	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGATTTCGGTTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	87852953	87803360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87803411_87806592_87806647_87831042_87831225_87848222_87848481_87852895
ENSMUSG00000022935.17_87806592_87853064_1	chr16	-	664	4	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	0	97036	0	-97036	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGACAACCCTCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	87853064	87806591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87806647_87831042_87831225_87848222_87848481_87852895
ENSMUSG00000022945.13_93681351_93703003_1	chr16	+	1845	13	NNC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	980	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	93681350	93703003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689624_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ENSMUSG00000022945.13_93681351_93703003_2	chr16	+	1844	13	NNC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	93681350	93703003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697818_93698245_93701893_93701986_93702792
ENSMUSG00000022945.13_93681351_93703003_3	chr16	+	1844	13	NNC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	93681350	93703003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696916_93697074_93697812_93698245_93701893_93701986_93702792
ENSMUSG00000022945.13_93681405_93698236_1	chr16	+	1458	11	NNC	ENSMUSG00000022945.13	novel	1484	11	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCCGGTAAGAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	93681404	93698236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689624_93689714_93691624_93691695_93691782_93691875_93696932_93697074_93697812
ENSMUSG00000022945.13_93681405_93698236_3	chr16	+	1456	11	NNC	ENSMUSG00000022945.13	novel	1484	11	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCCGGTAAGAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	93681404	93698236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688478_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696932_93697074_93697812
ENSMUSG00000022945.13_93681405_93698236_4	chr16	+	1463	11	FSM	ENSMUSG00000022945.13	ENST00000404930.1	1484	11	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCCGGTAAGAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	93681404	93698236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696932_93697074_93697812
ENSMUSG00000022945.13_93681405_93698236_5	chr16	+	1457	11	NNC	ENSMUSG00000022945.13	novel	1484	11	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCCGGTAAGAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	93681404	93698236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_93681504_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696932_93697074_93697812
ENSMUSG00000022947.9_93480147_93487671_1	chr16	+	919	3	FSM	ENSMUSG00000022947.9	ENSMUST00000039620.7	1170	3	44	207	44	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATAAACGTTAGCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	93480146	93487671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_93480502_93481934_93482043_93487215
ENSMUSG00000022947.9_93480147_93487671_2	chr16	+	917	3	NNC	ENSMUSG00000022947.9	novel	858	3	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2032	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATAAACGTTAGCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	93480146	93487671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_93480506_93481934_93482043_93487221
ENSMUSG00000022951.17_92188843_92194921_1	chr16	-	2112	4	FSM	ENSMUSG00000022951.17	ENST00000620920.4	2107	4	0	-5	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACGTTGTTGGTCGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	92194921	92188842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_92190517_92192753_92192914_92194150_92194370_92194862
ENSMUSG00000022951.17_92188843_92194921_2	chr16	-	2104	4	NNC	ENSMUSG00000022951.17	novel	2107	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACGTTGTTGGTCGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	92194921	92188842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_92190517_92192753_92192914_92194150_92194362_92194862
ENSMUSG00000022951.17_92189951_92195649_1	chr16	-	1165	4	ISM	ENSMUSG00000022951.17	ENST00000481448.5	2579	5	1229	1103	-728	-553	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGGCACACCCCCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	92195649	92189950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_92190517_92192753_92192914_92194150_92194446_92195505
ENSMUSG00000022951.17_92190024_92195724_1	chr16	-	1167	4	ISM	ENSMUSG00000022951.17	ENST00000481448.5	2579	5	1154	1176	-803	-626	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGACTGGTGGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	92195724	92190023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_92190517_92192753_92192914_92194150_92194446_92195505
ENSMUSG00000022951.17_92190242_92196866_1	chr16	-	1173	5	FSM	ENSMUSG00000022951.17	ENST00000481448.5	2579	5	12	1394	12	-844	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTGTGGCAGAAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	92196866	92190241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_92190517_92192753_92192914_92194150_92194446_92195505_92195866_92196783
ENSMUSG00000022952.18_92399236_92441161_1	chr16	-	4059	3	ISM	ENSMUSG00000022952.18	ENSMUST00000168195.8	1985	6	51852	-3050	51852	-882	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTTCTTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	92441161	92399235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_92403013_92410486_92410649_92441041
ENSMUSG00000022952.18_92399497_92485916_1	chr16	-	4028	5	ISM	ENSMUSG00000022952.18	ENSMUST00000168195.8	1985	6	7097	-2789	7097	1047	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTGATGGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	92485916	92399496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_92403013_92410486_92410649_92441041_92441234_92465595_92465701_92485863
ENSMUSG00000022952.18_92399746_92492510_1	chr16	-	4022	6	FSM	ENSMUSG00000022952.18	ENSMUST00000168195.8	1985	6	503	-2540	503	798	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCATTTTGGGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	92492510	92399745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_92403013_92410486_92410649_92441041_92441234_92465595_92465701_92485863_92486021_92492371
ENSMUSG00000022952.18_92399913_92622562_1	chr16	-	4056	7	ISM	ENSMUSG00000022952.18	ENSMUST00000023673.14	5861	8	475	1559	475	631	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	NA	NA	NA	NA	NA	NA	NA	NA	92622562	92399912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_92403013_92410486_92410649_92441041_92441234_92465595_92465701_92485863_92486021_92492371_92492626_92622476
ENSMUSG00000022956.12_91722201_91722515_1	chr16	-	166	2	ISM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	6060	99	6060	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTCAGCAAGGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	91722515	91722200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91722280_91722428
ENSMUSG00000022956.12_91723412_91725843_1	chr16	-	235	3	ISM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	2732	1310	2732	-1310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTTTCCACCATCATG	NA	NA	NA	NA	NA	NA	NA	NA	91725843	91723411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91723460_91723740_91723871_91725786
ENSMUSG00000022956.12_91723747_91725843_1	chr16	-	181	2	ISM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	2732	1645	2732	-1645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGAGTGAGTGGGCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	91725843	91723746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91723871_91725786
ENSMUSG00000022956.12_91725787_91728452_1	chr16	-	207	3	ISM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	123	3685	123	-3685	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCAGCTCTCTGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	91728452	91725786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91725898_91727241_91727293_91728407
ENSMUSG00000022957.21_91526354_91613805_1	chr16	+	1054	11	ISM	ENSMUSG00000022957.21	ENSMUST00000114001.8	3898	29	185	53293	87	-15436	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCAGAGGATGAGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	91526353	91613805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598525_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732
ENSMUSG00000022957.21_91526354_91624836_1	chr16	+	1847	15	ISM	ENSMUSG00000022957.21	ENSMUST00000095909.10	6103	16	96	4405	87	-4405	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGTCTTATTGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	91526353	91624836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748
ENSMUSG00000022957.21_91580993_91634076_1	chr16	+	1879	15	ISM	ENSMUSG00000022957.21	ENSMUST00000113993.8	3787	28	54513	33309	54513	4835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGAGCCTGTGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	91580992	91634076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948
ENSMUSG00000022957.21_91582198_91636558_1	chr16	+	1861	15	ISM	ENSMUSG00000022957.21	ENSMUST00000113993.8	3787	28	55718	30827	55718	7317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGCCCCCGGAAACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	91582197	91636558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503
ENSMUSG00000022957.21_91590571_91636686_1	chr16	+	1871	14	ISM	ENSMUSG00000022957.21	ENSMUST00000113993.8	3787	28	64091	30699	64091	7445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCAGCTAAGCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	91590570	91636686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503
ENSMUSG00000022957.21_91590591_91617389_1	chr16	+	961	9	ISM	ENSMUSG00000022957.21	ENSMUST00000114001.8	3898	29	64422	49709	64111	-11852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGAGACAGGAACTCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	91590590	91617389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91590656_91598525_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338
ENSMUSG00000022957.21_91590635_91617459_1	chr16	+	987	9	ISM	ENSMUSG00000022957.21	ENSMUST00000114001.8	3898	29	64466	49639	64155	-11782	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTGGAGTTTGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	91590634	91617459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91590656_91598525_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338
ENSMUSG00000022957.21_91598414_91638406_1	chr16	+	1861	14	ISM	ENSMUSG00000022957.21	ENSMUST00000113993.8	3787	28	71934	28979	71934	9165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTGTAAAAGTGGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	91598413	91638406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376
ENSMUSG00000022957.21_91598461_91638466_1	chr16	+	1874	14	ISM	ENSMUSG00000022957.21	ENSMUST00000113993.8	3787	28	71981	28919	71981	9225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCACCATCCAGCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	91598460	91638466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376
ENSMUSG00000022957.21_91608980_91647743_1	chr16	+	1880	13	ISM	ENSMUSG00000022957.21	ENST00000399355.6	3982	27	82713	19629	82500	18502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGGCTCAGCCTTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	91608979	91647743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638509_91645609_91645858_91647693
ENSMUSG00000022957.21_91613714_91650697_1	chr16	+	1924	12	ISM	ENSMUSG00000022957.21	ENST00000399355.6	3982	27	87447	16675	-87203	-16401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGTTTGGAGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	91613713	91650697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638509_91645609_91645858_91647693_91647854_91650582
ENSMUSG00000022957.21_91613825_91650750_1	chr16	+	1866	12	ISM	ENSMUSG00000022957.21	ENST00000399355.6	3982	27	87558	16622	-87092	-16348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAACTCATTTCAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	91613824	91650750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638509_91645609_91645858_91647693_91647854_91650582
ENSMUSG00000022957.21_91615418_91660159_1	chr16	+	1859	13	ISM	ENSMUSG00000022957.21	ENST00000399355.6	3982	27	89151	7213	-85499	-6939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCCTACGCTGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	91615417	91660159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638509_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91660144
ENSMUSG00000022957.21_91615473_91660215_1	chr16	+	1860	13	ISM	ENSMUSG00000022957.21	ENST00000399355.6	3982	27	89206	7157	-85444	-6883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCTGATCCGGAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	91615472	91660215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638509_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91660144
ENSMUSG00000022957.21_91615526_91660267_1	chr16	+	1859	13	ISM	ENSMUSG00000022957.21	ENST00000399355.6	3982	27	89259	7105	-85391	-6831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTCTCTACGTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	91615525	91660267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638509_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91660144
ENSMUSG00000022957.21_91617435_91645663_1	chr16	+	954	8	ISM	ENSMUSG00000022957.21	ENSMUST00000114001.8	3898	29	91266	21435	-83482	16422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACGGGATGGTTCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	91617434	91645663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609
ENSMUSG00000022957.21_91617613_91645792_1	chr16	+	983	7	ISM	ENSMUSG00000022957.21	ENSMUST00000114001.8	3898	29	91444	21306	-83304	16551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCAGTGACCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	91617612	91645792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609
ENSMUSG00000022957.21_91617670_91666677_1	chr16	+	1862	13	ISM	ENSMUSG00000022957.21	ENST00000399355.6	3982	27	91403	695	-83247	-421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGACCCCAGCCAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	91617669	91666677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638509_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91660144_91660267_91664907_91665026_91666505
ENSMUSG00000022957.21_91617683_91645841_1	chr16	+	962	7	ISM	ENSMUSG00000022957.21	ENSMUST00000114001.8	3898	29	91514	21257	-83234	16600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTTCAGTTCCACGTAT	NA	NA	NA	NA	NA	NA	NA	NA	91617682	91645841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609
ENSMUSG00000022957.21_91624747_91667098_1	chr16	+	1864	13	ISM	ENSMUSG00000022957.21	ENST00000399355.6	3982	27	98480	274	-76170	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCTCAGGCTTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	91624746	91667098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638509_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ENSMUSG00000022957.21_91624792_91647754_1	chr16	+	971	7	ISM	ENSMUSG00000022957.21	ENSMUST00000114001.8	3898	29	98623	19344	-76125	18513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTCTGACCGTACCTAG	NA	NA	NA	NA	NA	NA	NA	NA	91624791	91647754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693
ENSMUSG00000022957.21_91625082_91667222_1	chr16	+	1898	12	ISM	ENSMUSG00000022957.21	ENST00000399355.6	3982	27	98815	150	-75835	124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAACTCACTGCAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	91625081	91667222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91625222_91633948_91634077_91636503_91636731_91638376_91638509_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ENSMUSG00000022957.21_91625182_91651494_1	chr16	+	959	7	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	98945	57805	-75735	-15604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGAGAGTGGCTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	91625181	91651494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91651460
ENSMUSG00000022957.21_91633947_91667385_1	chr16	+	1923	11	ISM	ENSMUSG00000022957.21	ENST00000399355.6	3982	27	107680	-13	-66970	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGCGCTTTCAATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	91633946	91667385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91634077_91636503_91636731_91638376_91638509_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ENSMUSG00000022957.21_91634011_91655166_1	chr16	+	976	7	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	107774	54133	-66906	-11932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGTTACCAAGAAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	91634010	91655166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91651460_91651544_91655096
ENSMUSG00000022957.21_91636676_91660267_1	chr16	+	1004	8	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	110439	49032	-64241	-6831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTCTCTACGTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	91636675	91660267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91651460_91651544_91655096_91655264_91658081_91658128_91660144
ENSMUSG00000022957.21_91638421_91664973_1	chr16	+	970	8	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	112184	44326	-62496	-2125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGCAAAATCACCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	91638420	91664973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91638499_91645609_91645858_91647693_91647854_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907
ENSMUSG00000022957.21_91638475_91665029_1	chr16	+	972	8	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	112238	44270	-62442	-2069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCGCAGGCCGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	91638474	91665029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91638499_91645609_91645858_91647693_91647854_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907
ENSMUSG00000022957.21_91645624_91666546_1	chr16	+	971	8	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	119387	42753	-55293	-552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACGAACTAGCCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	91645623	91666546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91645858_91647693_91647854_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505
ENSMUSG00000022957.21_91645675_91666604_1	chr16	+	978	8	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	119438	42695	-55242	-494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGACTGGTGGAAAGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	91645674	91666604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91645858_91647693_91647854_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505
ENSMUSG00000022957.21_91647786_91686063_1	chr16	+	976	9	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	121549	23236	-53131	17520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTAACTGGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	91647785	91686063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91647854_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91684287_91684410_91686005
ENSMUSG00000022957.21_91651501_91690722_1	chr16	+	960	9	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	125264	18577	-49416	-18502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGATGATTGGCGACAT	NA	NA	NA	NA	NA	NA	NA	NA	91651500	91690722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91684287_91684410_91686005_91686113_91690679
ENSMUSG00000022957.21_91655097_91690827_1	chr16	+	1022	8	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	128860	18472	-45820	-18397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGACGAGGCTCCAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	91655096	91690827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91684287_91684410_91686005_91686113_91690679
ENSMUSG00000022957.21_91655220_91693249_1	chr16	+	970	9	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	128983	16050	-45697	-15975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCCAGCTTTATACTGA	NA	NA	NA	NA	NA	NA	NA	NA	91655219	91693249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91684287_91684410_91686005_91686113_91690679_91690864_91693214
ENSMUSG00000022957.21_91660187_91696470_1	chr16	+	980	8	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	133950	12829	-40730	-12754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGTGAACGAGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	91660186	91696470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91660267_91664907_91665026_91666505_91666698_91684287_91684410_91686005_91686113_91690679_91690864_91693214_91693314_91696392
ENSMUSG00000022957.21_91660226_91696539_1	chr16	+	1010	8	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	133989	12760	-40691	-12685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGAAGGCCTTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	91660225	91696539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91660267_91664907_91665026_91666505_91666698_91684287_91684410_91686005_91686113_91690679_91690864_91693214_91693314_91696392
ENSMUSG00000022957.21_91684334_91705319_1	chr16	+	998	8	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	158097	3980	-16583	-3905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTGAGCTCTACATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	91684333	91705319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91684410_91686005_91686113_91690679_91690864_91693214_91693314_91696392_91696561_91702174_91702388_91703645_91703768_91705290
ENSMUSG00000022957.21_91690701_91706160_1	chr16	+	1000	8	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	164464	3139	-10216	-3064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCTAAACCCCAAGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	91690700	91706160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91690864_91693214_91693314_91696392_91696561_91702174_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092
ENSMUSG00000022957.21_91690767_91706205_1	chr16	+	979	8	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	164530	3094	-10150	-3019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGAGCAGGAGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	91690766	91706205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91690864_91693214_91693314_91696392_91696561_91702174_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092
ENSMUSG00000022957.21_91690829_91706250_1	chr16	+	962	8	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	164592	3049	-10088	-2974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTCGCCTGATGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	91690828	91706250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91690864_91693214_91693314_91696392_91696561_91702174_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092
ENSMUSG00000022957.21_91693255_91708823_1	chr16	+	978	8	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	167018	476	-7662	-401	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTGCTGCATGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	91693254	91708823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91693314_91696392_91696561_91702174_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092_91706267_91708748
ENSMUSG00000022957.21_91696501_91708979_1	chr16	+	967	7	ISM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	170264	320	-4416	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATGAAGCAAAGACGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	91696500	91708979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91696561_91702174_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092_91706267_91708748
ENSMUSG00000022957.21_91702197_91709088_1	chr16	+	994	6	ISM	ENSMUSG00000022957.21	ENSMUST00000231735.2	1437	8	1238	136	1238	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTATGGTCTCATCATGG	NA	NA	NA	NA	NA	NA	NA	NA	91702196	91709088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092_91706267_91708748
ENSMUSG00000022957.21_91702295_91709152_1	chr16	+	960	6	ISM	ENSMUSG00000022957.21	ENSMUST00000231735.2	1437	8	1336	72	1336	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGAGCCTGGCTCCTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	91702294	91709152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092_91706267_91708748
ENSMUSG00000022957.21_91702348_91709224_1	chr16	+	979	6	ISM	ENSMUSG00000022957.21	ENSMUST00000231735.2	1437	8	1389	0	1389	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTTGGAGAACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	91702347	91709224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092_91706267_91708748
ENSMUSG00000022960.14_91476153_91480699_1	chr16	-	1537	6	ISM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	4959	0	4954	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTGGGTAAGAAACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	91480699	91476152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520
ENSMUSG00000022960.14_91476272_91481329_1	chr16	-	1558	7	ISM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	4329	119	4324	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAAGTGCTGGGCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	91481329	91476271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189
ENSMUSG00000022960.14_91476410_91483144_1	chr16	-	1549	8	ISM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	2514	257	2509	-257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGTACCTTAGACGAG	NA	NA	NA	NA	NA	NA	NA	NA	91483144	91476409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054
ENSMUSG00000022960.14_91476410_91483219_1	chr16	-	1624	8	ISM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	2439	257	2434	-257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGTACCTTAGACGAG	NA	NA	NA	NA	NA	NA	NA	NA	91483219	91476409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054
ENSMUSG00000022960.14_91476563_91484763_1	chr16	-	1591	9	ISM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	895	410	890	-410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGCAAGGAGCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	91484763	91476562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682
ENSMUSG00000022960.14_91476841_91485591_1	chr16	-	1610	10	FSM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	67	688	62	-688	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGGAAGTCATCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	91485591	91476840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
ENSMUSG00000022961.19_91444394_91452766_1	chr16	+	1914	3	ISM	ENSMUSG00000022961.19	ENSMUST00000114036.9	7945	5	-374	8155	0	-8155	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACAGAGTTCGAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	91444393	91452766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91444873_91448517_91448685_91451498
ENSMUSG00000022961.19_91444767_91453043_1	chr16	+	1818	3	ISM	ENSMUSG00000022961.19	ENSMUST00000114036.9	7945	5	-1	7878	0	-7878	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGGGGCACTGGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	91444766	91453043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91444873_91448517_91448685_91451498
ENSMUSG00000022961.19_91453955_91462059_1	chr16	+	4263	5	ISM	ENSMUSG00000022961.19	ENSMUST00000119368.8	7529	7	9188	537	9182	-537	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAAGTTTATTGGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	91453954	91462059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91461807
ENSMUSG00000022961.19_91454219_91462301_1	chr16	+	4241	5	ISM	ENSMUSG00000022961.19	ENSMUST00000119368.8	7529	7	9452	295	9446	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTCCCCTCTTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	91454218	91462301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91461807
ENSMUSG00000022961.19_91454506_91462596_1	chr16	+	4249	5	ISM	ENSMUSG00000022961.19	ENSMUST00000119368.8	7529	7	9739	0	9733	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTGTGCAAAATCACGC	NA	NA	NA	NA	NA	NA	NA	NA	91454505	91462596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91461807
ENSMUSG00000022961.19_91456464_91472394_1	chr16	+	1836	7	ISM	ENSMUSG00000022961.19	ENSMUST00000114037.9	8399	12	11697	3689	11691	-3689	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGAACCCATCCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	91456463	91472394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288
ENSMUSG00000022961.19_91456831_91475163_1	chr16	+	1821	10	ISM	ENSMUSG00000022961.19	ENSMUST00000117633.8	8731	12	12437	932	12058	-920	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCCACTTGCTTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	91456830	91475163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ENSMUSG00000022961.19_91456940_91475287_1	chr16	+	1836	10	ISM	ENSMUSG00000022961.19	ENSMUST00000117633.8	8731	12	12546	808	12167	-796	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACATTGTGTAAAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	91456939	91475287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ENSMUSG00000022961.19_91457039_91475948_1	chr16	+	2451	10	ISM	ENSMUSG00000022961.19	ENSMUST00000114037.9	8399	12	12272	135	12266	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGAGGAAGTTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	91457038	91475948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ENSMUSG00000022961.19_91459035_91475948_1	chr16	+	1922	9	ISM	ENSMUSG00000022961.19	ENSMUST00000117633.8	8731	12	14641	147	14262	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGAGGAAGTTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	91459034	91475948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ENSMUSG00000022961.19_91461108_91476080_1	chr16	+	1917	8	ISM	ENSMUSG00000022961.19	ENSMUST00000117633.8	8731	12	16714	15	16335	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTGTGTCTTATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	91461107	91476080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ENSMUSG00000022962.16_91418074_91418815_1	chr16	-	644	2	ISM	ENSMUSG00000022962.16	ENSMUST00000023684.14	3518	22	25025	0	24998	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTGAGGGCACTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	91418815	91418073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91418637_91418734
ENSMUSG00000022962.16_91418292_91425009_1	chr16	-	1174	7	ISM	ENSMUSG00000022962.16	ENSMUST00000232289.2	3276	22	18810	0	18804	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	91425009	91418291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914
ENSMUSG00000022962.16_91418561_91425415_1	chr16	-	1069	8	ISM	ENSMUSG00000022962.16	ENSMUST00000232289.2	3276	22	18404	269	18398	-269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACGGGTCAAAGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	91425415	91418560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309
ENSMUSG00000022962.16_91422248_91430848_1	chr16	-	1056	7	ISM	ENSMUSG00000022962.16	ENSMUST00000232289.2	3276	22	12971	3956	12965	-3956	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGGAAGCCTGGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	91430848	91422247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762
ENSMUSG00000022962.16_91426975_91432968_1	chr16	-	679	5	ISM	ENSMUSG00000022962.16	ENSMUST00000232289.2	3276	22	10851	8683	10845	3318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATTGCTGCAGCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	91432968	91426974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881
ENSMUSG00000022962.16_91427906_91438234_1	chr16	-	1071	9	ISM	ENSMUSG00000022962.16	ENSMUST00000232289.2	3276	22	5585	9614	5579	2387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAAATTCAGCCTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	91438234	91427905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099
ENSMUSG00000022962.16_91430293_91439971_1	chr16	-	1750	10	ISM	ENSMUSG00000022962.16	ENSMUST00000231380.2	1852	11	3842	0	3842	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTGATTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	91439971	91430292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844
ENSMUSG00000022962.16_91430467_91443800_1	chr16	-	1668	11	FSM	ENSMUSG00000022962.16	ENSMUST00000120450.2	1865	11	23	174	13	-174	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTTTTGTCAAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	91443800	91430466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ENSMUSG00000022964.15_91371687_91374919_1	chr16	-	1418	2	ISM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	19769	296	5358	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCTCTGCATCCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	91374919	91371686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91373047_91374861
ENSMUSG00000022964.15_91371828_91378657_1	chr16	-	1445	4	ISM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	16031	437	1620	-437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCCCTCAAAATGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	91378657	91371827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582
ENSMUSG00000022964.15_91372016_91383882_1	chr16	-	1416	6	ISM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	10806	625	-3605	-625	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACCCGAGAGGATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	91383882	91372015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829
ENSMUSG00000022964.15_91372185_91394552_1	chr16	-	1417	7	FSM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	136	794	136	-794	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTAGCTCTCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	91394552	91372184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
ENSMUSG00000022964.15_91372309_91394688_1	chr16	-	1429	7	FSM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	0	918	0	694	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACCCTGCAGCAGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	91394688	91372308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
ENSMUSG00000022965.9_91344035_91356914_1	chr16	+	463	4	ISM	ENSMUSG00000022965.9	ENSMUST00000023687.9	3708	7	75	5597	75	-5597	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTCATACACTTCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	91344034	91356914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91344121_91351835_91351969_91354772_91354967_91356864
ENSMUSG00000022965.9_91354829_91358530_1	chr16	+	470	4	ISM	ENSMUSG00000022965.9	ENSMUST00000023687.9	3708	7	10869	3981	10869	-3981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGATTCCGTTGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	91354828	91358530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91354967_91356864_91357014_91357432_91357593_91358507
ENSMUSG00000022965.9_91354906_91358576_1	chr16	+	439	4	ISM	ENSMUSG00000022965.9	ENSMUST00000023687.9	3708	7	10946	3935	10946	-3935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCTGCTTCACCCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	91354905	91358576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91354967_91356864_91357014_91357432_91357593_91358507
ENSMUSG00000022965.9_91356964_91359822_1	chr16	+	432	4	ISM	ENSMUSG00000022965.9	ENSMUST00000023687.9	3708	7	13004	2689	13004	-2689	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGGGACTCCGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	91356963	91359822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91357014_91357432_91357593_91358507_91358666_91359758
ENSMUSG00000022965.9_91357538_91359980_1	chr16	+	435	3	ISM	ENSMUSG00000022965.9	ENSMUST00000023687.9	3708	7	13578	2531	13578	-2531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTTGTTCTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	91357537	91359980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91357593_91358507_91358666_91359758
ENSMUSG00000022965.9_91358594_91360145_1	chr16	+	459	2	ISM	ENSMUSG00000022965.9	ENSMUST00000023687.9	3708	7	14634	2366	14634	-2366	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGCTTTCTCCAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	91358593	91360145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91358666_91359758
ENSMUSG00000022969.14_91203123_91222722_2	chr16	+	1844	7	NNC	ENSMUSG00000022969.14	novel	1850	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGGTTTGTTCTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	91203122	91222722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_91203261_91204505_91204630_91208776_91208929_91211500_91211668_91216219_91216368_91218620_91218779_91221765
ENSMUSG00000022971.19_91169729_91201002_1	chr16	+	1514	9	FSM	ENSMUSG00000022971.19	ENSMUST00000023693.14	3047	9	58	1475	-9	-1252	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCATGGATGAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	91169728	91201002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644_91190802_91196105_91196234_91200597
ENSMUSG00000022971.19_91169787_91188664_1	chr16	+	664	6	ISM	ENSMUSG00000022971.19	ENSMUST00000117836.8	1099	7	49	2264	0	-2264	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATGGAATTTCCACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	91169786	91188664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608
ENSMUSG00000022971.19_91169787_91201159_1	chr16	+	1613	9	FSM	ENSMUSG00000022971.19	ENSMUST00000023693.14	3047	9	116	1318	0	-1095	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGATAGCTGGTGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	91169786	91201159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644_91190802_91196105_91196234_91200597
ENSMUSG00000022971.19_91180744_91190751_1	chr16	+	702	6	ISM	ENSMUSG00000022971.19	ENSMUST00000117836.8	1099	7	11006	177	10957	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATCTCCCTTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	91180743	91190751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644
ENSMUSG00000022971.19_91182914_91201472_1	chr16	+	1531	6	ISM	ENSMUSG00000022971.19	ENSMUST00000023693.14	3047	9	13243	1005	13127	-782	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTGTTTACAGGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	91182913	91201472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91182954_91184831_91185005_91188608_91188767_91190644_91190802_91196105_91196234_91200597
ENSMUSG00000022971.19_91184830_91190928_1	chr16	+	617	3	ISM	ENSMUSG00000022971.19	ENSMUST00000117836.8	1099	7	15092	0	15043	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGGCTCTGTCTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	91184829	91190928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91185005_91188608_91188767_91190644
ENSMUSG00000022971.19_91188609_91201775_1	chr16	+	1621	4	ISM	ENSMUSG00000022971.19	ENSMUST00000023693.14	3047	9	18938	702	18822	-479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTCTGGGCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	91188608	91201775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91188767_91190644_91190802_91196105_91196234_91200597
ENSMUSG00000022971.19_91196131_91202030_1	chr16	+	1536	2	ISM	ENSMUSG00000022971.19	ENSMUST00000023693.14	3047	9	26460	447	26344	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGGATGAAGGGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	91196130	91202030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_91196234_91200597
ENSMUSG00000022972.11_90722858_90724036_1	chr16	-	260	3	ISM	ENSMUSG00000022972.11	ENSMUST00000023694.11	1430	7	7966	161	7575	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACACTTGACTGTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	90724036	90722857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_90722971_90723232_90723329_90723985
ENSMUSG00000022972.11_90724268_90727924_1	chr16	-	240	3	ISM	ENSMUSG00000022972.11	ENST00000440966.5	892	6	3687	1520	3687	-1520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATAAAGAAGATTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	90727924	90724267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_90724397_90726803_90726872_90727881
ENSMUSG00000022978.12_90516200_90518646_1	chr16	-	887	3	ISM	ENSMUSG00000022978.12	ENSMUST00000099554.5	1333	5	5646	0	5646	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGGTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	90518646	90516199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_90516867_90517541_90517639_90518523
ENSMUSG00000022978.12_90516315_90523247_1	chr16	-	839	4	ISM	ENSMUSG00000022978.12	ENSMUST00000099554.5	1333	5	1045	115	1045	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATATTAGTGGACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	90523247	90516314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_90516867_90517541_90517639_90518523_90518647_90523180
ENSMUSG00000022978.12_90516471_90524027_1	chr16	-	797	5	FSM	ENSMUSG00000022978.12	ENSMUST00000099554.5	1333	5	265	271	265	-271	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTTAAGCCTCTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	90524027	90516470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_90516867_90517541_90517639_90518523_90518647_90523180_90523248_90523913
ENSMUSG00000022982.11_90017642_90019765_1	chr16	+	274	2	ISM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	0	3452	0	-3452	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCCTAGGCTGGCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	90017641	90019765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_90017818_90019667
ENSMUSG00000022982.11_90017749_90021313_1	chr16	+	236	3	ISM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	107	1904	107	-1904	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCAGCACGCTCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	90017748	90021313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_90017818_90019667_90019765_90021243
ENSMUSG00000022982.11_90019665_90022150_1	chr16	+	288	3	ISM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	2023	1067	2023	-1067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTTTTCATATAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	90019664	90022150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_90019765_90021243_90021314_90022032
ENSMUSG00000022982.11_90019749_90023073_1	chr16	+	240	4	ISM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	2107	144	2107	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAGAAAGTACAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	90019748	90023073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_90019765_90021243_90021314_90022032_90022151_90023037
ENSMUSG00000022982.11_90022031_90023217_1	chr16	+	300	2	ISM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	4389	0	4389	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1095	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTGTGACTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	90022030	90023217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_90022151_90023037
ENSMUSG00000022987.13_98186258_98191585_1	chr15	-	1235	4	FSM	ENSMUSG00000022987.13	ENST00000448928.7	1360	4	125	0	125	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTCTCACCATTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	98191585	98186257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98187102_98188358_98188473_98190666_98190859_98191500
ENSMUSG00000022987.13_98186258_98191700_1	chr15	-	1350	4	FSM	ENSMUSG00000022987.13	ENST00000448928.7	1360	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTCTCACCATTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	98191700	98186257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98187102_98188358_98188473_98190666_98190859_98191500
ENSMUSG00000022992.18_98416701_98429682_1	chr15	-	1613	8	ISM	ENSMUSG00000022992.18	ENSMUST00000023727.17	2311	10	2443	-1	2443	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTGTAAAGTGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	98429682	98416700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426907_98427166_98427335_98429203_98429319_98429600
ENSMUSG00000022992.18_98416891_98422517_1	chr15	-	824	3	ISM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	9628	1352	9608	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTACATAGTTGGGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	98422517	98416890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98417429_98418198_98418307_98422339
ENSMUSG00000022992.18_98417022_98431657_1	chr15	-	1648	9	ISM	ENSMUSG00000022992.18	ENSMUST00000023727.17	2311	10	468	320	468	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTCCTAAGCCACGGACA	NA	NA	NA	NA	NA	NA	NA	NA	98431657	98417021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426907_98427166_98427335_98429203_98429319_98429600_98429780_98431398
ENSMUSG00000022992.18_98417118_98426784_1	chr15	-	811	5	ISM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	5361	1579	5341	-416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTTTTTTTTTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	98426784	98417117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743
ENSMUSG00000022992.18_98417168_98426839_1	chr15	-	816	5	ISM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	5306	1629	5286	-466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAATCCAAGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98426839	98417167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743
ENSMUSG00000022992.18_98417173_98426861_1	chr15	-	828	5	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	5264	-471	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGACAAACATAATCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	98426861	98417172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_98417429_98418198_98418307_98422344_98422594_98424455_98424553_98426743
ENSMUSG00000022992.18_98417234_98431965_1	chr15	-	1619	10	FSM	ENSMUSG00000022992.18	ENSMUST00000023727.17	2311	10	160	532	160	-532	multi-exon	FALSE	canonical	NA	NA	NA	NA	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTCCCTGAACAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	98431965	98417233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426907_98427166_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ENSMUSG00000022992.18_98417242_98427216_1	chr15	-	859	6	ISM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	4929	1703	4909	-540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATCATCTCTCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	98427216	98417241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170
ENSMUSG00000022992.18_98417320_98427334_1	chr15	-	899	6	ISM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	4811	1781	4791	-618	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTCTATCAGTTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	98427334	98417319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170
ENSMUSG00000022992.18_98418198_98429318_1	chr15	-	906	6	ISM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	2827	2659	2807	-1496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTATCTTTAACAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	98429318	98418197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203
ENSMUSG00000022992.18_98426849_98431876_1	chr15	-	873	6	ISM	ENSMUSG00000022992.18	ENSMUST00000023727.17	2311	10	249	10147	249	-10147	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAATGTCTTAGGCGATA	NA	NA	NA	NA	NA	NA	NA	NA	98431876	98426848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98426907_98427166_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ENSMUSG00000022992.18_98429204_98432125_1	chr15	-	896	4	ISM	ENSMUSG00000022992.18	ENSMUST00000023727.17	2311	10	0	12502	0	-12502	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTGTAACTCCACATA	NA	NA	NA	NA	NA	NA	NA	NA	98432125	98429203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98429319_98429600_98429780_98431398_98431658_98431782
ENSMUSG00000022994.10_98489464_98491394_1	chr15	-	1071	3	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	11218	-561	11218	561	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCCAAAGAATGCAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	98491394	98489463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98490357_98490553_98490679_98491341
ENSMUSG00000022994.10_98489464_98491436_1	chr15	-	1113	3	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	11176	-561	11176	561	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCCAAAGAATGCAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	98491436	98489463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98490357_98490553_98490679_98491341
ENSMUSG00000022994.10_98489592_98491508_1	chr15	-	1057	3	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	11104	-433	11104	433	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGCATGATCCTGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	98491508	98489591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98490357_98490553_98490679_98491341
ENSMUSG00000022994.10_98489750_98492322_1	chr15	-	1048	4	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	10290	-275	10290	275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTCTTAGGCACAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	98492322	98489749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98490357_98490553_98490679_98491341_98491547_98492211
ENSMUSG00000022994.10_98489812_98492379_1	chr15	-	1043	4	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	10233	-213	10233	213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCCTTTGCTTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	98492379	98489811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98490357_98490553_98490679_98491341_98491547_98492211
ENSMUSG00000022994.10_98489849_98492443_1	chr15	-	1070	4	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	10169	-176	10169	176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTTGTACAAAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	98492443	98489848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98490357_98490553_98490679_98491341_98491547_98492211
ENSMUSG00000022994.10_98490025_98493973_1	chr15	-	1145	7	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	8639	0	8639	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTTCTTAATTGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	98493973	98490024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98490357_98490553_98490679_98491341_98491547_98492211_98492476_98492793_98492924_98493007_98493044_98493920
ENSMUSG00000022994.10_98490163_98494039_1	chr15	-	1073	7	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	8573	138	8573	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGAGCTGTGACAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	98494039	98490162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98490357_98490553_98490679_98491341_98491547_98492211_98492476_98492793_98492924_98493007_98493044_98493920
ENSMUSG00000022994.10_98490296_98494857_1	chr15	-	1083	8	ISM	ENSMUSG00000022994.10	ENST00000550422.5	5843	21	12372	2421	7755	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTCAAGGTGAAGGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	98494857	98490295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98490357_98490553_98490679_98491341_98491547_98492211_98492476_98492793_98492924_98493007_98493044_98493920_98494100_98494774
ENSMUSG00000022994.10_98490588_98495132_1	chr15	-	1110	8	ISM	ENSMUSG00000022994.10	ENST00000550422.5	5843	21	12097	2713	7480	-563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGACAGCACTGGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	98495132	98490587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98490679_98491341_98491547_98492211_98492476_98492793_98492924_98493007_98493044_98493920_98494100_98494774_98494892_98495044
ENSMUSG00000022994.10_98491422_98495629_1	chr15	-	1059	9	ISM	ENSMUSG00000022994.10	ENST00000550422.5	5843	21	11600	3547	6983	-1397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGACTATGCCATGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	98495629	98491421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98491547_98492211_98492476_98492793_98492924_98493007_98493044_98493920_98494100_98494774_98494892_98495044_98495133_98495260_98495359_98495607
ENSMUSG00000022994.10_98491478_98495682_1	chr15	-	1056	9	ISM	ENSMUSG00000022994.10	ENST00000550422.5	5843	21	11547	3603	6930	-1453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGCTAAATGCCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	98495682	98491477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98491547_98492211_98492476_98492793_98492924_98493007_98493044_98493920_98494100_98494774_98494892_98495044_98495133_98495260_98495359_98495607
ENSMUSG00000022994.10_98491525_98495739_1	chr15	-	1066	9	ISM	ENSMUSG00000022994.10	ENST00000550422.5	5843	21	11490	3650	6873	-1500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGTTGGAGAAGATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	98495739	98491524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98491547_98492211_98492476_98492793_98492924_98493007_98493044_98493920_98494100_98494774_98494892_98495044_98495133_98495260_98495359_98495607
ENSMUSG00000022994.10_98492279_98496270_1	chr15	-	1052	10	ISM	ENSMUSG00000022994.10	ENST00000550422.5	5843	21	10959	4404	6342	-2254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGGCAAACAACGAGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	98496270	98492278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98492476_98492793_98492924_98493007_98493044_98493920_98494100_98494774_98494892_98495044_98495133_98495260_98495359_98495607_98495756_98495978_98496005_98496237
ENSMUSG00000022994.10_98492422_98496558_1	chr15	-	1061	11	ISM	ENSMUSG00000022994.10	ENST00000550422.5	5843	21	10671	4547	6054	-2397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCATAACATTCTTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	98496558	98492421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98492476_98492793_98492924_98493007_98493044_98493920_98494100_98494774_98494892_98495044_98495133_98495260_98495359_98495607_98495756_98495978_98496005_98496237_98496367_98496502
ENSMUSG00000022994.10_98494021_98497842_1	chr15	-	1048	10	ISM	ENSMUSG00000022994.10	ENST00000550422.5	5843	21	9387	6146	4770	-3996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTTCATCTTGGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	98497842	98494020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98494100_98494774_98494892_98495044_98495133_98495260_98495359_98495607_98495756_98495978_98496005_98496237_98496367_98496502_98496645_98496738_98496898_98497780
ENSMUSG00000022994.10_98494058_98497909_1	chr15	-	1078	10	ISM	ENSMUSG00000022994.10	ENST00000550422.5	5843	21	9320	6183	4703	-4033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCCTACACATCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	98497909	98494057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98494100_98494774_98494892_98495044_98495133_98495260_98495359_98495607_98495756_98495978_98496005_98496237_98496367_98496502_98496645_98496738_98496898_98497780
ENSMUSG00000022994.10_98494775_98498170_1	chr15	-	1147	10	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	4442	4750	4442	-4750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATCTCCCAGGCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	98498170	98494774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98494892_98495044_98495133_98495260_98495359_98495607_98495756_98495978_98496005_98496237_98496367_98496502_98496645_98496738_98496898_98497780_98497909_98498058
ENSMUSG00000022994.10_98495045_98498397_1	chr15	-	1152	10	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	4215	5020	4215	-5020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTAGGGGGACTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	98498397	98495044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98495133_98495260_98495359_98495607_98495756_98495978_98496005_98496237_98496367_98496502_98496645_98496738_98496898_98497780_98497909_98498058_98498171_98498275
ENSMUSG00000022994.10_98495314_98498848_1	chr15	-	1068	10	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	3764	5289	3764	-5289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCCTGGTTTTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	98498848	98495313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98495359_98495607_98495756_98495978_98496005_98496237_98496367_98496502_98496645_98496738_98496898_98497780_98497909_98498058_98498171_98498275_98498398_98498791
ENSMUSG00000022994.10_98495698_98501776_1	chr15	-	1048	10	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	836	5673	836	-5673	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCGATGCCCGAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	98501776	98495697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98495756_98495978_98496005_98496237_98496367_98496502_98496645_98496738_98496898_98497780_98497909_98498058_98498171_98498275_98498398_98498791_98498942_98501754
ENSMUSG00000022994.10_98496272_98501918_1	chr15	-	1072	8	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	694	6247	694	-6247	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGACCAAGGACTCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	98501918	98496271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98496367_98496502_98496645_98496738_98496898_98497780_98497909_98498058_98498171_98498275_98498398_98498791_98498942_98501754
ENSMUSG00000022994.10_98496330_98501965_1	chr15	-	1061	8	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	647	6305	647	-6305	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGGGCCAACTCCATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	98501965	98496329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98496367_98496502_98496645_98496738_98496898_98497780_98497909_98498058_98498171_98498275_98498398_98498791_98498942_98501754
ENSMUSG00000022994.10_98496584_98502111_1	chr15	-	1089	7	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	501	6559	501	-6559	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCGTGGTGGTGAACGCAA	NA	NA	NA	NA	NA	NA	NA	NA	98502111	98496583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98496645_98496738_98496898_98497780_98497909_98498058_98498171_98498275_98498398_98498791_98498942_98501754
ENSMUSG00000022994.10_98496818_98502219_1	chr15	-	1057	6	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	393	6793	393	-6793	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTACGGAAATGGCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	98502219	98496817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98496898_98497780_98497909_98498058_98498171_98498275_98498398_98498791_98498942_98501754
ENSMUSG00000022994.10_98496865_98502279_1	chr15	-	1070	6	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	333	6840	333	-6840	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCGTGTGGGCATCCACA	NA	NA	NA	NA	NA	NA	NA	NA	98502279	98496864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98496898_98497780_98497909_98498058_98498171_98498275_98498398_98498791_98498942_98501754
ENSMUSG00000022994.10_98498276_98502621_1	chr15	-	1139	3	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	-9	8251	-9	-8251	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTAGGGCGGGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	98502621	98498275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98498398_98498791_98498942_98501754
ENSMUSG00000022994.10_98498839_98507170_1	chr15	-	1047	3	ISM	ENSMUSG00000022994.10	ENST00000550422.5	5843	21	59	10964	59	-8814	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACATCCAGGCGCGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	98507170	98498838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98498942_98501754_98502614_98507085
ENSMUSG00000022996.16_98669641_98674910_1	chr15	-	1810	5	FSM	ENSMUSG00000022996.16	ENST00000407467.5	1705	5	-40	-65	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGACTGGCAGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	98674910	98669640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98670816_98672004_98672066_98672207_98672379_98674398_98674662_98674770
ENSMUSG00000022996.16_98669641_98674910_2	chr15	-	1807	5	NNC	ENSMUSG00000022996.16	novel	2217	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGACTGGCAGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	98674910	98669640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_98670816_98672004_98672062_98672206_98672379_98674398_98674662_98674770
ENSMUSG00000022999.16_98802032_98810360_1	chr15	-	1511	14	ISM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	5752	234	5728	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCCATGTTTACATGAT	NA	NA	NA	NA	NA	NA	NA	NA	98810360	98802031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98802390_98802545_98802708_98803796_98803864_98804124_98804216_98805417_98805492_98805774_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278
ENSMUSG00000023004.9_98829306_98832319_1	chr15	-	1616	4	FSM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	127	0	127	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGGATACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	98832319	98829305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98830444_98830572_98830722_98830853_98831077_98832213
ENSMUSG00000023004.9_98829306_98832446_1	chr15	-	1736	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	36671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGGATACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	98832446	98829305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_98830444_98830572_98830722_98830860_98831077_98832213
ENSMUSG00000023004.9_98829306_98832446_2	chr15	-	1737	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	35999	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGGATACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	98832446	98829305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_98830444_98830572_98830716_98830853_98831077_98832213
ENSMUSG00000023004.9_98829306_98832446_3	chr15	-	1737	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	35891	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGGATACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	98832446	98829305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_98830444_98830572_98830722_98830853_98831071_98832213
ENSMUSG00000023008.19_99217047_99220249_1	chr15	-	1134	9	ISM	ENSMUSG00000023008.19	ENSMUST00000081224.14	4137	25	48081	1941	48081	-1941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAAGGATGGTACCATTG	NA	NA	NA	NA	NA	NA	NA	NA	99220249	99217046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075
ENSMUSG00000023008.19_99217490_99220582_1	chr15	-	1126	9	ISM	ENSMUSG00000023008.19	ENSMUST00000081224.14	4137	25	47748	2384	47748	-2384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGGAGAAGCAGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	99220582	99217489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483
ENSMUSG00000023008.19_99218321_99221370_1	chr15	-	1156	9	ISM	ENSMUSG00000023008.19	ENSMUST00000081224.14	4137	25	46960	3215	46960	-3215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATGACAACAGCGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	99221370	99218320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200
ENSMUSG00000023008.19_99221265_99229951_1	chr15	-	1171	10	ISM	ENSMUSG00000023008.19	ENSMUST00000120633.2	4290	26	38379	6159	38379	-6159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTCTTCCTCTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	99229951	99221264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99227160_99227314_99229867
ENSMUSG00000023008.19_99222664_99235573_1	chr15	-	1134	12	ISM	ENSMUSG00000023008.19	ENSMUST00000120633.2	4290	26	32757	7558	32757	-7558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGCTGCTACAGCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	99235573	99222663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510
ENSMUSG00000023010.16_99290867_99306515_1	chr15	+	933	10	FSM	ENSMUSG00000023010.16	ENSMUST00000023749.15	2452	10	104	1415	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAAATTTTTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	99290866	99306515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUSG00000023010.16_99299459_99306707_1	chr15	+	1072	9	ISM	ENSMUSG00000023010.16	ENSMUST00000159531.3	939	10	7968	-216	7968	192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGACCCTCTCTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	99299458	99306707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUSG00000023010.16_99299942_99306707_1	chr15	+	980	8	NNC	ENSMUSG00000023010.16	novel	2452	10	NA	NA	8451	192	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGACCCTCTCTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	99299941	99306707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306361
ENSMUSG00000023010.16_99299942_99306707_2	chr15	+	986	8	ISM	ENSMUSG00000023010.16	ENSMUST00000159531.3	939	10	8451	-216	8451	192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGACCCTCTCTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	99299941	99306707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUSG00000023010.16_99303596_99306897_1	chr15	+	948	6	ISM	ENSMUSG00000023010.16	ENSMUST00000159531.3	939	10	12105	-406	12105	382	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTCCGCTCTGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	99303595	99306897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUSG00000023010.16_99303755_99306971_1	chr15	+	952	5	NNC	ENSMUSG00000023010.16	novel	2452	10	NA	NA	12264	456	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCAAGGTGGAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	99303754	99306971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306361
ENSMUSG00000023010.16_99303755_99307050_1	chr15	+	1037	5	ISM	ENSMUSG00000023010.16	ENSMUST00000159531.3	939	10	12264	-559	12264	535	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGGATGGGCCTCCACTA	NA	NA	NA	NA	NA	NA	NA	NA	99303754	99307050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUSG00000023010.16_99303755_99307054_1	chr15	+	1035	5	NNC	ENSMUSG00000023010.16	novel	2452	10	NA	NA	12264	539	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGGCCTCCACTAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	99303754	99307054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306361
ENSMUSG00000023010.16_99304456_99307170_1	chr15	+	988	3	NNC	ENSMUSG00000023010.16	novel	2452	10	NA	NA	12965	655	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTCGGTGAGGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	99304455	99307170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_99304559_99305148_99305225_99306361
ENSMUSG00000023015.15_99518947_99520120_1	chr15	-	420	2	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	29404	570	29404	-569	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTGTACCTCTTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	99520120	99518946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99519346_99520099
ENSMUSG00000023015.15_99518949_99522190_1	chr15	-	832	5	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	27334	572	27334	-571	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	740	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAACTGTACCTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	99522190	99518948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118
ENSMUSG00000023015.15_99518989_99520182_1	chr15	-	440	2	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	29342	612	29342	-611	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATGAAATGACTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	99520182	99518988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99519346_99520099
ENSMUSG00000023015.15_99519290_99522138_1	chr15	-	439	5	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	27386	913	27386	-912	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTCCGTACCTCAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	99522138	99519289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118
ENSMUSG00000023015.15_99520100_99522224_1	chr15	-	469	4	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	27300	1723	27300	-1722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCAGGGGTGAGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	99522224	99520099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99520206_99521449_99521574_99521807_99521941_99522118
ENSMUSG00000023015.15_99520176_99524083_1	chr15	-	413	5	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	25441	1799	25441	-1798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCAGCTTGTCAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	99524083	99520175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063
ENSMUSG00000023015.15_99521484_99524169_1	chr15	-	435	4	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	25355	3107	25355	-3106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACTCAACACCACGCAC	NA	NA	NA	NA	NA	NA	NA	NA	99524169	99521483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99521574_99521807_99521941_99522118_99522225_99524063
ENSMUSG00000023015.15_99521514_99529056_1	chr15	-	826	7	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	20468	3137	20468	-3136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAGAACATAGACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	99529056	99521513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989
ENSMUSG00000023015.15_99521544_99524211_1	chr15	-	417	4	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	25313	3167	25313	-3166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACTGGAATCAGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	99524211	99521543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99521574_99521807_99521941_99522118_99522225_99524063
ENSMUSG00000023015.15_99521868_99524410_1	chr15	-	446	4	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	25114	3491	25114	-3490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACTGTGCCCAATCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	99524410	99521867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99521941_99522118_99522225_99524063_99524263_99524342
ENSMUSG00000023015.15_99521876_99530029_1	chr15	-	831	7	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	19495	3499	19495	-3498	internal_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGCCCATACTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	99530029	99521875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960
ENSMUSG00000023015.15_99522209_99526652_1	chr15	-	449	4	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	22872	3832	22872	-3831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCACAGCCGCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	99526652	99522208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99522225_99524063_99524263_99524342_99524439_99526514
ENSMUSG00000023015.15_99526545_99537572_1	chr15	-	804	8	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	11952	8168	11952	-8167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGGGGACACCGGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	99537572	99526544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494
ENSMUSG00000023015.15_99529063_99535583_1	chr15	-	446	6	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	13941	10686	13941	-10685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGACACAGACAATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	99535583	99529062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518
ENSMUSG00000023015.15_99532174_99537700_1	chr15	-	416	4	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	11824	13797	11824	-13796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATTCTTCTTTGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	99537700	99532173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99532177_99534012_99534083_99535518_99535656_99537494
ENSMUSG00000023015.15_99534036_99540852_1	chr15	-	479	4	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	8672	15659	8672	-15658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACAAGACTGATGAATCA	NA	NA	NA	NA	NA	NA	NA	NA	99540852	99534035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99534083_99535518_99535656_99537494_99537701_99540763
ENSMUSG00000023015.15_99535554_99549450_1	chr15	-	460	4	ISM	ENSMUSG00000023015.15	ENSMUST00000023756.12	2933	17	87	17176	74	-17176	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAGCATCCAGTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	99549450	99535553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99535656_99537494_99537701_99540763_99540853_99549387
ENSMUSG00000023018.6_99607183_99611872_1	chr15	+	1960	4	ISM	ENSMUSG00000023018.6	ENSMUST00000023759.6	3307	13	7173	0	7011	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCTGCTGTCTGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	99607182	99611872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_99607298_99608973_99609097_99610039_99610142_99610252
ENSMUSG00000023020.4_99623558_99626578_1	chr15	+	1223	2	NNC	ENSMUSG00000023020.4	novel	2090	2	NA	NA	30	-835	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGCATCAGGTCTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	99623557	99626578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_99623730_99625527
ENSMUSG00000023020.4_99623558_99626629_1	chr15	+	1276	2	FSM	ENSMUSG00000023020.4	ENSMUST00000023761.4	2090	2	30	784	30	-784	multi-exon	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTCAACTCAGGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	99623557	99626629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_99623730_99625525
ENSMUSG00000023021.16_99633473_99670343_1	chr15	-	1957	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	139	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	99670343	99633472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ENSMUSG00000023021.16_99633473_99670482_1	chr15	-	2090	10	NNC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1881	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	99670482	99633472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643822_99644917_99645049_99649116_99649223_99670063
ENSMUSG00000023022.15_99676997_99681519_1	chr15	-	2294	2	ISM	ENSMUSG00000023022.15	ENSMUST00000109024.9	4109	8	36505	646	36505	-646	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATAATTCTTCCAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	99681519	99676996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99679172_99681400
ENSMUSG00000023022.15_99677254_99700041_1	chr15	-	2270	5	ISM	ENSMUSG00000023022.15	ENSMUST00000109024.9	4109	8	17983	903	17983	-903	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTATATACTTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	99700041	99677253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991
ENSMUSG00000023022.15_99677498_99705599_1	chr15	-	2287	7	ISM	ENSMUSG00000023022.15	ENSMUST00000109024.9	4109	8	12425	1147	12425	-1147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTACTGTCTTTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	99705599	99677497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539
ENSMUSG00000023022.15_99678098_99741619_1	chr15	-	2287	10	ISM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	31718	1747	-23595	-1747	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCGCCAAGGGTCATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	99741619	99678097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555
ENSMUSG00000023022.15_99678148_99741677_1	chr15	-	2295	10	ISM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	31660	1797	-23653	-1797	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTAGCAACTCACTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	99741677	99678147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555
ENSMUSG00000023022.15_99678260_99773297_1	chr15	-	2294	11	FSM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	40	1909	40	-1909	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAAGTGGTCCGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	99773297	99678259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
ENSMUSG00000023022.15_99681453_99717865_1	chr15	-	1077	7	ISM	ENSMUSG00000023022.15	ENSMUST00000109024.9	4109	8	159	5102	159	-5102	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTTTCACATCAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	99717865	99681452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374
ENSMUSG00000023022.15_99681491_99718024_1	chr15	-	1198	7	ISM	ENSMUSG00000023022.15	ENSMUST00000109024.9	4109	8	0	5140	0	-5140	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGTGTACCCCATGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	99718024	99681490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374
ENSMUSG00000023027.14_100125752_100158414_1	chr15	+	1602	7	FSM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	52	711	52	-711	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTGTGGTGGAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	100125751	100158414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ENSMUSG00000023027.14_100125752_100158460_1	chr15	+	1648	7	FSM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	52	665	52	-665	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAACTGTCTGCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	100125751	100158460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ENSMUSG00000023027.14_100130614_100158578_1	chr15	+	1554	6	ISM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	4914	547	4914	-547	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTGAAGATCATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	100130613	100158578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ENSMUSG00000023027.14_100149958_100158843_1	chr15	+	1611	4	ISM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	24258	282	24258	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAATGATTATTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	100149957	100158843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_100150081_100151974_100152155_100152234_100152395_100157695
ENSMUSG00000023027.14_100151994_100158951_1	chr15	+	1572	3	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	26294	-174	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTGAATTGTATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	100151993	100158951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_100152155_100152234_100152395_100157700
ENSMUSG00000023027.14_100152096_100159125_1	chr15	+	1649	3	ISM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	26396	0	26396	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTTTTCGGAATGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	100152095	100159125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_100152155_100152234_100152395_100157695
ENSMUSG00000023027.14_100152230_100159125_1	chr15	+	1593	2	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	26530	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTTTTCGGAATGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	100152229	100159125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_100152395_100157697
ENSMUSG00000023030.17_100285779_100297368_1	chr15	-	1546	4	ISM	ENSMUSG00000023030.17	ENSMUST00000023774.12	3025	17	23568	0	23515	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTAGGGGTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	100297368	100285778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_100287043_100293150_100293205_100295544_100295699_100297294
ENSMUSG00000023030.17_100285885_100299199_1	chr15	-	1491	5	ISM	ENSMUSG00000023030.17	ENSMUST00000023774.12	3025	17	21737	106	21684	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAAACGCGCGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	100299199	100285884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148
ENSMUSG00000023030.17_100286059_100299493_1	chr15	-	1477	6	ISM	ENSMUSG00000023030.17	ENSMUST00000023774.12	3025	17	21443	280	21390	-280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCTACGCGCTGACACT	NA	NA	NA	NA	NA	NA	NA	NA	100299493	100286058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432
ENSMUSG00000023030.17_100286394_100301706_1	chr15	-	1465	9	ISM	ENSMUSG00000023030.17	ENSMUST00000023774.12	3025	17	19230	615	19177	-615	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	100301706	100286393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688
ENSMUSG00000023030.17_100286564_100303524_1	chr15	-	1501	10	ISM	ENSMUSG00000023030.17	ENSMUST00000023774.12	3025	17	17412	785	17359	-785	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAATAACTCTTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	100303524	100286563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456
ENSMUSG00000023030.17_100286897_100307127_1	chr15	-	1513	14	ISM	ENSMUSG00000023030.17	ENSMUST00000023774.12	3025	17	13809	1118	13756	-1118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTAGTTCGGAGGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	100307127	100286896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080
ENSMUSG00000023030.17_100291346_100308073_1	chr15	-	3361	14	ISM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	12810	902	12810	-902	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAAAGTAGCAAAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	100308073	100291345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963
ENSMUSG00000023034.8_101164727_101169659_1	chr15	+	1192	4	ISM	ENSMUSG00000023034.8	ENST00000243050.5	2649	8	39	3014	0	-3014	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTGCCCTGTGGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	101164726	101169659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101164853_101165608_101165745_101167963_101168851_101169616
ENSMUSG00000023034.8_101164727_101169679_1	chr15	+	1212	4	ISM	ENSMUSG00000023034.8	ENST00000243050.5	2649	8	39	2994	0	-2994	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGGCGGAACCGCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	101164726	101169679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101164853_101165608_101165745_101167963_101168851_101169616
ENSMUSG00000023034.8_101165670_101170097_1	chr15	+	1156	4	ISM	ENSMUSG00000023034.8	ENST00000243050.5	2649	8	982	2576	943	-2576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCCTCCCCTACCAATC	NA	NA	NA	NA	NA	NA	NA	NA	101165669	101170097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101165745_101167963_101168851_101169616_101169747_101170033
ENSMUSG00000023034.8_101165689_101170115_1	chr15	+	1163	4	NNC	ENSMUSG00000023034.8	novel	2649	8	NA	NA	962	-2558	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTCACTTCCCTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	101165688	101170115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_101165753_101167963_101168851_101169616_101169747_101170033
ENSMUSG00000023034.8_101168021_101170645_1	chr15	+	1159	4	ISM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	3294	2031	3294	-2028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGCAACAATTTTATGACT	NA	NA	NA	NA	NA	NA	NA	NA	101168020	101170645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101168851_101169616_101169747_101170033_101170186_101170598
ENSMUSG00000023034.8_101168067_101170701_1	chr15	+	1169	4	ISM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	3340	1975	3340	-1972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAAAAATCCCTGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	101168066	101170701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101168851_101169616_101169747_101170033_101170186_101170598
ENSMUSG00000023034.8_101168209_101170926_1	chr15	+	1158	5	ISM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	3482	1750	3482	-1747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCAGGCCTGGTACTACA	NA	NA	NA	NA	NA	NA	NA	NA	101168208	101170926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895
ENSMUSG00000023034.8_101168318_101171041_1	chr15	+	1164	5	ISM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	3591	1635	3591	-1632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTGCCTGTCCGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	101168317	101171041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895
ENSMUSG00000023034.8_101168512_101172047_1	chr15	+	1174	6	ISM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	3785	629	3785	-626	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCATCTTTTGCCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	101168511	101172047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ENSMUSG00000023034.8_101169615_101172306_1	chr15	+	1096	5	ISM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	4888	370	4888	-367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTATTCACGGGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	101169614	101172306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ENSMUSG00000023034.8_101170036_101172468_1	chr15	+	1124	4	ISM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	5309	208	5309	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGGAAGGGGTGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	101170035	101172468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101170186_101170598_101170802_101170895_101171075_101171876
ENSMUSG00000023034.8_101170076_101172536_1	chr15	+	1152	4	ISM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	5349	140	5349	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTGTACATAACTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	101170075	101172536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101170186_101170598_101170802_101170895_101171075_101171876
ENSMUSG00000023034.8_101170112_101172676_1	chr15	+	1256	4	ISM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	5385	0	5385	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTTTTTTTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	101170111	101172676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101170186_101170598_101170802_101170895_101171075_101171876
ENSMUSG00000023044.3_102085748_102087454_1	chr15	-	675	4	ISM	ENSMUSG00000023044.3	ENSMUST00000023805.3	2279	15	10039	314	9956	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	102087454	102085747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395
ENSMUSG00000023044.3_102086029_102088475_1	chr15	-	752	7	ISM	ENSMUSG00000023044.3	ENSMUST00000023805.3	2279	15	9018	595	8935	-275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCAAGCTCTGCGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	102088475	102086028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405
ENSMUSG00000023044.3_102086960_102094908_1	chr15	-	743	8	ISM	ENSMUSG00000023044.3	ENSMUST00000023805.3	2279	15	2585	1526	2502	-1206	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTAGTCTTTGCCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	102094908	102086959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828
ENSMUSG00000023045.14_102062699_102071389_1	chr15	+	1245	11	NNC	ENSMUSG00000023045.14	novel	1251	11	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCATGCTACACAGATG	NA	NA	NA	NA	NA	NA	NA	NA	102062698	102071389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_102062804_102065246_102065524_102066051_102066122_102066512_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
ENSMUSG00000023045.14_102062699_102071389_2	chr15	+	1249	11	NNC	ENSMUSG00000023045.14	novel	1251	11	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCATGCTACACAGATG	NA	NA	NA	NA	NA	NA	NA	NA	102062698	102071389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_102062804_102065246_102065524_102066046_102066122_102066512_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071332
ENSMUSG00000023045.14_102062699_102071389_3	chr15	+	1250	11	FSM	ENSMUSG00000023045.14	ENST00000301466.8	1251	11	3	-2	3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCATGCTACACAGATG	NA	NA	NA	NA	NA	NA	NA	NA	102062698	102071389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102062804_102065246_102065524_102066046_102066122_102066512_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
ENSMUSG00000023045.14_102062699_102071389_4	chr15	+	1245	11	NIC	ENSMUSG00000023045.14	novel	1251	11	NA	NA	3	2	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCATGCTACACAGATG	NA	NA	NA	NA	NA	NA	NA	NA	102062698	102071389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_+_102062804_102065246_102065524_102066046_102066117_102066512_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
ENSMUSG00000023045.14_102062699_102071389_5	chr15	+	1250	11	ISM	ENSMUSG00000023045.14	ENSMUST00000023806.14	2208	15	3738	515	3	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCATGCTACACAGATG	NA	NA	NA	NA	NA	NA	NA	NA	102062698	102071389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102062804_102065246_102065524_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
ENSMUSG00000023046.7_102053213_102056414_1	chr15	+	240	2	NNC	ENSMUSG00000023046.7	novel	1112	4	NA	NA	416	-1532	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGGGGGGGTGGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	102053212	102056414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_102053320_102056281
ENSMUSG00000023046.7_102053213_102056414_2	chr15	+	242	2	ISM	ENSMUSG00000023046.7	ENSMUST00000023807.7	1112	4	416	1532	416	-1532	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGGGGGGGTGGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	102053212	102056414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102053320_102056279
ENSMUSG00000023046.7_102053282_102056573_1	chr15	+	209	3	ISM	ENSMUSG00000023046.7	ENSMUST00000023807.7	1112	4	485	1373	485	-1373	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCAGACTGAGGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	102053281	102056573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102053320_102056279_102056414_102056536
ENSMUSG00000023046.7_102056361_102057653_1	chr15	+	215	3	ISM	ENSMUSG00000023046.7	ENSMUST00000023807.7	1112	4	3564	293	3564	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGATCCGATGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	102056360	102057653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102056414_102056536_102056660_102057614
ENSMUSG00000023047.12_102354262_102360994_1	chr15	+	1057	7	ISM	ENSMUSG00000023047.12	ENST00000379791.7	1327	8	19	1904	19	-1904	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTTTTTGATAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	102354261	102360994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102354423_102354698_102354891_102355142_102355215_102355434_102355548_102355665_102355897_102360583_102360699_102360821
ENSMUSG00000023047.12_102354383_102362672_1	chr15	+	961	8	FSM	ENSMUSG00000023047.12	ENST00000379791.7	1327	8	140	226	140	-226	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGATTGCTGGGACGCA	NA	NA	NA	NA	NA	NA	NA	NA	102354382	102362672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102354423_102354698_102354891_102355142_102355215_102355434_102355548_102355665_102355897_102360583_102360699_102360821_102360995_102362647
ENSMUSG00000023047.12_102354737_102362756_1	chr15	+	962	7	NNC	ENSMUSG00000023047.12	novel	1327	8	NA	NA	494	-142	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGGGCGTCCTCTTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	102354736	102362756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_102354891_102355142_102355215_102355434_102355548_102355665_102355897_102360583_102360699_102360826_102360995_102362647
ENSMUSG00000023047.12_102354817_102362832_1	chr15	+	963	7	ISM	ENSMUSG00000023047.12	ENST00000379791.7	1327	8	574	66	574	-66	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTCGGCCTCAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	102354816	102362832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102354891_102355142_102355215_102355434_102355548_102355665_102355897_102360583_102360699_102360821_102360995_102362647
ENSMUSG00000023047.12_102354825_102362839_1	chr15	+	957	7	NNC	ENSMUSG00000023047.12	novel	1327	8	NA	NA	582	-59	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCTCAGCAGAGTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	102354824	102362839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_102354891_102355142_102355215_102355434_102355548_102355665_102355897_102360583_102360699_102360826_102360995_102362647
ENSMUSG00000023047.12_102355139_102362980_1	chr15	+	1041	6	ISM	ENSMUSG00000023047.12	ENST00000379791.7	1327	8	896	-82	896	82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACATGCCTACTGCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	102355138	102362980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102355215_102355434_102355548_102355665_102355897_102360583_102360699_102360821_102360995_102362647
ENSMUSG00000023048.14_102367637_102369023_1	chr15	+	430	4	ISM	ENSMUSG00000023048.14	ENSMUST00000023810.12	1224	5	27	2218	0	-2188	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGCATGTGCCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	102367636	102369023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102367691_102367898_102368017_102368542_102368582_102368804
ENSMUSG00000023048.14_102367987_102369127_1	chr15	+	392	3	ISM	ENSMUSG00000023048.14	ENSMUST00000171245.8	1353	4	320	2092	320	-2084	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGCACAAGCATCACAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	102367986	102369127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102368017_102368542_102368582_102368804
ENSMUSG00000023051.12_102426933_102431485_1	chr15	+	591	5	ISM	ENSMUSG00000023051.12	ENST00000552857.5	912	6	83	372	39	-372	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGCCAACTAGAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	102426932	102431485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102427038_102429555_102429649_102430158_102430232_102430415_102430534_102431283
ENSMUSG00000023051.12_102426933_102431654_1	chr15	+	1027	9	FSM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	39	457	39	-203	multi-exon	TRUE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAACTGTCCACCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	102426932	102431654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ENSMUSG00000023051.12_102427552_102431776_1	chr15	+	1049	8	ISM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	658	335	658	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCCACTGCAGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	102427551	102431776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ENSMUSG00000023051.12_102430157_102431776_1	chr15	+	552	4	ISM	ENSMUSG00000023051.12	ENST00000552857.5	912	6	3307	81	3263	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCCACTGCAGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	102430156	102431776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102430232_102430415_102430534_102431283_102431486_102431619
ENSMUSG00000023051.12_102430157_102432111_1	chr15	+	1015	5	ISM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	3263	0	3263	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	102430156	102432111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ENSMUSG00000023055.11_102615212_102618965_1	chr15	-	1408	6	ISM	ENSMUSG00000023055.11	ENSMUST00000229231.2	2226	13	9186	-206	9186	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTCATGACGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	102618965	102615211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102615982_102616980_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839
ENSMUSG00000023055.11_102615407_102619488_1	chr15	-	1353	7	ISM	ENSMUSG00000023055.11	ENSMUST00000229231.2	2226	13	8663	-11	8663	11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAAGTCCTCAAACGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	102619488	102615406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102615982_102616980_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348
ENSMUSG00000023055.11_102615418_102619543_1	chr15	-	1397	7	ISM	ENSMUSG00000023055.11	ENSMUST00000229231.2	2226	13	8608	0	8608	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCCCACACCGAAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	102619543	102615417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102615982_102616980_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348
ENSMUSG00000023055.11_102615682_102622306_1	chr15	-	1365	9	ISM	ENSMUSG00000023055.11	ENSMUST00000023818.11	2824	15	8307	470	5845	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTACAGACCATGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	102622306	102615681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102615982_102616980_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290
ENSMUSG00000023055.11_102615824_102624231_1	chr15	-	1353	10	ISM	ENSMUSG00000023055.11	ENSMUST00000023818.11	2824	15	6382	612	3920	196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTCACCTTTGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	102624231	102615823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102615982_102616980_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176
ENSMUSG00000023055.11_102615933_102624325_1	chr15	-	1338	10	ISM	ENSMUSG00000023055.11	ENSMUST00000023818.11	2824	15	6288	721	3826	87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTCCATGGAAGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	102624325	102615932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102615982_102616980_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176
ENSMUSG00000023055.11_102617021_102624740_1	chr15	-	1325	10	ISM	ENSMUSG00000023055.11	ENSMUST00000171838.2	2968	14	5826	1001	3411	-1001	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTGAGCTCGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	102624740	102617020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664
ENSMUSG00000023055.11_102617548_102626302_1	chr15	-	1369	10	ISM	ENSMUSG00000023055.11	ENSMUST00000171838.2	2968	14	4264	1528	1849	-1528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCAGGTCCAGGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	102626302	102617547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237
ENSMUSG00000023055.11_102617548_102626361_1	chr15	-	1428	10	ISM	ENSMUSG00000023055.11	ENSMUST00000171838.2	2968	14	4205	1528	1790	-1528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCAGGTCCAGGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	102626361	102617547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237
ENSMUSG00000023055.11_102617847_102627511_1	chr15	-	1466	10	ISM	ENSMUSG00000023055.11	ENSMUST00000171838.2	2968	14	3055	1827	640	-1827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCCCGCCTCTTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	102627511	102617846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408
ENSMUSG00000023055.11_102618367_102628040_1	chr15	-	1329	10	ISM	ENSMUSG00000023055.11	ENSMUST00000171838.2	2968	14	2526	2347	111	-2347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACGGTCAGCCCTCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	102628040	102618366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976
ENSMUSG00000023055.11_102618879_102628151_1	chr15	-	1366	9	ISM	ENSMUSG00000023055.11	ENSMUST00000171838.2	2968	14	2415	2859	0	-2859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGACTGAGCTGGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	102628151	102618878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976
ENSMUSG00000023055.11_102619348_102630566_1	chr15	-	1370	9	ISM	ENSMUSG00000023055.11	ENSMUST00000171838.2	2968	14	0	3328	0	-3328	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGGTGACCCCCCCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	102630566	102619347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976_102628157_102630481
ENSMUSG00000023067.15_29309953_29317644_1	chr17	+	397	2	ISM	ENSMUSG00000023067.15	ENSMUST00000119901.9	922	3	0	1031	0	-907	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGACAAGAGGCCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	29309952	29317644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_29310076_29317370
ENSMUSG00000023067.15_29310059_29317756_1	chr17	+	403	2	ISM	ENSMUSG00000023067.15	ENSMUST00000119901.9	922	3	106	919	106	-795	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGTGGGCCCGGAACATC	NA	NA	NA	NA	NA	NA	NA	NA	29310058	29317756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_29310076_29317370
ENSMUSG00000023067.15_29317724_29318381_1	chr17	+	152	2	FSM	ENSMUSG00000023067.15	ENSMUST00000122348.3	1172	2	850	170	850	-170	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGCCCTCTTCTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	29317723	29318381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_29317812_29318317
ENSMUSG00000023070.7_20415926_20426370_1	chrX	+	836	5	FSM	ENSMUSG00000023070.7	ENST00000457380.5	837	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGATGGCCTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	20415925	20426370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_20416113_20416601_20416781_20418558_20418742_20425593_20425726_20426215
ENSMUSG00000023072.15_35096460_35119722_1	chr7	+	1213	10	ISM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	-20	18392	-20	-18392	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGAAACTTATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	35096459	35119722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671
ENSMUSG00000023072.15_35097415_35122828_1	chr7	+	1229	11	ISM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	935	15286	935	-15286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGGCCTTGCTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	35097414	35122828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724
ENSMUSG00000023072.15_35102433_35124180_1	chr7	+	1223	11	ISM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	5953	13934	5953	-13934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCACCTCCAGGACGGTG	NA	NA	NA	NA	NA	NA	NA	NA	35102432	35124180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081
ENSMUSG00000023072.15_35105042_35127140_1	chr7	+	1196	11	ISM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	8562	10974	8562	-10974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCACAGCTGGATAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	35105041	35127140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024
ENSMUSG00000023072.15_35109044_35127726_1	chr7	+	1146	11	ISM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	12564	10388	12564	-10388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGCTGGGCCACCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	35109043	35127726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624
ENSMUSG00000023072.15_35117065_35128723_1	chr7	+	1210	9	ISM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	20585	9391	20585	-9391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTTCTTCAAAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	35117064	35128723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581
ENSMUSG00000023072.15_35117213_35132032_1	chr7	+	1152	10	ISM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	20733	6082	20733	-6082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGCATGCCGGCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	35117212	35132032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942
ENSMUSG00000023072.15_35117714_35135068_1	chr7	+	1179	10	ISM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	21234	3046	21234	-3046	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCGGGAGCACCACG	NA	NA	NA	NA	NA	NA	NA	NA	35117713	35135068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898
ENSMUSG00000023072.15_35120307_35137851_1	chr7	+	1147	9	ISM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	23827	263	23827	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCACGTCACAGCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	35120306	35137851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
ENSMUSG00000023072.15_35124115_35138106_1	chr7	+	1188	7	ISM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	27635	8	27635	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACACACTTTTGCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	35124114	35138106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
ENSMUSG00000023072.15_35124181_35138114_1	chr7	+	1130	7	ISM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	27701	0	27701	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATGTTTATTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	35124180	35138114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
ENSMUSG00000023074.12_52433885_52436745_1	chrX	-	1147	2	ISM	ENSMUSG00000023074.12	ENSMUST00000096447.9	1773	6	22634	0	22634	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCCTAAGCACAACGACT	NA	NA	NA	NA	NA	NA	NA	NA	52436745	52433884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_52434867_52436580
ENSMUSG00000023075.10_123629860_123631876_1	chr4	-	873	2	ISM	ENSMUSG00000023075.10	ENST00000372984.8	1317	4	12178	-2	12178	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGAACTTCTACAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	123631876	123629859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_123630658_123631801
ENSMUSG00000023075.10_123630107_123637366_1	chr4	-	899	4	ISM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	6772	1755	6688	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTTCCAGGCACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	123637366	123630106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_123630658_123631801_123631874_123632935_123633071_123637225
ENSMUSG00000023075.10_123630107_123643924_1	chr4	-	942	4	FSM	ENSMUSG00000023075.10	ENST00000372984.8	1317	4	130	245	130	-155	multi-exon	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTTCCAGGCACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	123643924	123630106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123643740
ENSMUSG00000023075.10_123630235_123643924_1	chr4	-	814	4	FSM	ENSMUSG00000023075.10	ENST00000372984.8	1317	4	130	373	130	-283	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATTTGATGCACGACAA	NA	NA	NA	NA	NA	NA	NA	NA	123643924	123630234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123643740
ENSMUSG00000023075.10_123630290_123643924_1	chr4	-	900	5	FSM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	214	1938	130	-338	multi-exon	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTATTATTTGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	123643924	123630289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123637225_123637367_123643740
ENSMUSG00000023075.10_123630412_123637300_1	chr4	-	393	3	ISM	ENSMUSG00000023075.10	ENST00000446189.6	1233	4	6754	460	6754	-460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGACAAAGTACCTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	123637300	123630411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_123630658_123631801_123631874_123637225
ENSMUSG00000023075.10_123630522_123643774_1	chr4	-	383	4	FSM	ENSMUSG00000023075.10	ENST00000446189.6	1233	4	280	570	280	-570	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTCCATTTTATACAACT	NA	NA	NA	NA	NA	NA	NA	NA	123643774	123630521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_123630658_123631801_123631874_123637225_123637367_123643740
ENSMUSG00000023075.10_123630584_123643813_1	chr4	-	360	4	FSM	ENSMUSG00000023075.10	ENST00000446189.6	1233	4	241	632	241	-632	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTTTGATATCACATT	NA	NA	NA	NA	NA	NA	NA	NA	123643813	123630583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_123630658_123631801_123631874_123637225_123637367_123643740
ENSMUSG00000023075.10_123630644_123643868_1	chr4	-	355	4	FSM	ENSMUSG00000023075.10	ENST00000446189.6	1233	4	186	692	186	-692	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGCCTATCTGGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	123643868	123630643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_123630658_123631801_123631874_123637225_123637367_123643740
ENSMUSG00000023089.13_24518665_24528012_2	chr6	-	868	5	NNC	ENSMUSG00000023089.13	novel	875	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTCCATGTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	24528012	24518664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_24518824_24519190_24519250_24522657_24522775_24527271_24527317_24527524
ENSMUSG00000023092.17_55777147_55835406_1	chrX	+	666	5	ISM	ENSMUSG00000023092.17	ENSMUST00000023854.10	2356	7	0	3300	0	-2189	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTGTGGTAGGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	55777146	55835406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236
ENSMUSG00000023092.17_55799708_55835865_1	chrX	+	613	5	ISM	ENSMUSG00000023092.17	ENSMUST00000116596.8	1203	7	22219	1730	22219	-1730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCGAGTGCTTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	55799707	55835865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823
ENSMUSG00000023092.17_55825090_55837764_1	chrX	+	1340	6	FSM	ENSMUSG00000023092.17	ENSMUST00000114772.9	2283	6	7	936	0	169	multi-exon	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGCAGCGGCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	55825089	55837764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_55825155_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
ENSMUSG00000023092.17_55833358_55837948_1	chrX	+	1450	5	ISM	ENSMUSG00000023092.17	ENSMUST00000114772.9	2283	6	8275	752	8268	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCCCCCATACTAACAT	NA	NA	NA	NA	NA	NA	NA	NA	55833357	55837948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
ENSMUSG00000023092.17_55834494_55837285_1	chrX	+	624	4	ISM	ENSMUSG00000023092.17	ENSMUST00000114772.9	2283	6	9411	1415	9404	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTGGCCAACAAGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	55834493	55837285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55834679_55835236_55835407_55835823_55836011_55837203
ENSMUSG00000023104.10_134615797_134622092_1	chr5	+	427	6	ISM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	4253	8567	4253	-8567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGGTCCTCACCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	134615796	134622092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042
ENSMUSG00000023104.10_134624135_134626950_1	chr5	+	445	3	ISM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	12591	3709	12591	-3709	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTGCTGGGGTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	134624134	134626950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_134624218_134625735_134625850_134626702
ENSMUSG00000023104.10_134625756_134627059_1	chr5	+	451	2	ISM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	14212	3600	14212	-3600	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGAGCTCTGGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	134625755	134627059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_134625850_134626702
ENSMUSG00000023106.16_124045345_124065203_1	chr5	+	648	6	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	107	-1695	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCACAGGCGGCGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	124045344	124065203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_124045430_124046162_124046278_124055243_124055348_124060242_124060327_124062793_124062911_124065060
ENSMUSG00000023106.16_124045345_124065347_1	chr5	+	681	8	FSM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	107	1551	107	-1551	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGTGATCCTGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	124045344	124065347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ENSMUSG00000023106.16_124046177_124065456_1	chr5	+	691	7	ISM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	939	1442	939	-1442	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCTACAGTAAAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	124046176	124065456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ENSMUSG00000023106.16_124046257_124065492_1	chr5	+	649	6	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	1019	-1406	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCCTCACTGTTCCGTAC	NA	NA	NA	NA	NA	NA	NA	NA	124046256	124065492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_124046278_124055240_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ENSMUSG00000023106.16_124055325_124065603_1	chr5	+	655	5	ISM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	10087	1295	10087	-1295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTATGCATGACTCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	124055324	124065603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ENSMUSG00000023106.16_124062886_124065796_1	chr5	+	649	3	ISM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	17648	1102	17648	-1102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAGCTTACGGGTAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	124062885	124065796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124062911_124065060_124065201_124065312
ENSMUSG00000023106.16_124065139_124065909_1	chr5	+	659	2	ISM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	19901	989	19901	-989	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTCCTTCATTAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	124065138	124065909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124065201_124065312
ENSMUSG00000023110.13_54744644_54754818_1	chr14	-	2527	17	FSM	ENSMUSG00000023110.13	ENSMUST00000023873.12	2691	17	164	0	-10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTGCTTCTTTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	54754818	54744643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ENSMUSG00000023110.13_54744644_54754927_1	chr14	-	2631	17	NNC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTGCTTCTTTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	54754927	54744643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748602_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ENSMUSG00000023110.13_54745178_54753649_1	chr14	-	1298	11	ISM	ENSMUSG00000023110.13	ENST00000397440.8	1600	13	1159	0	1159	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTCAGTTCCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	54753649	54745177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54753562
ENSMUSG00000023110.13_54745178_54754852_1	chr14	-	2101	17	NNC	ENSMUSG00000023110.13	novel	2107	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTCAGTTCCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	54754852	54745177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748507_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754624
ENSMUSG00000023110.13_54745178_54754852_2	chr14	-	2100	17	NNC	ENSMUSG00000023110.13	novel	2107	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTCAGTTCCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	54754852	54745177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747089_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754624
ENSMUSG00000023110.13_54745178_54754852_3	chr14	-	2101	17	NNC	ENSMUSG00000023110.13	novel	2107	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTCAGTTCCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	54754852	54745177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748602_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754624
ENSMUSG00000023110.13_54745178_54754852_4	chr14	-	2106	17	FSM	ENSMUSG00000023110.13	ENST00000397441.6	2107	17	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTCAGTTCCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	54754852	54745177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754624
ENSMUSG00000023110.13_54745178_54754852_5	chr14	-	2101	17	NNC	ENSMUSG00000023110.13	novel	2107	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1877	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTCAGTTCCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	54754852	54745177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748809_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754624
ENSMUSG00000023110.13_54745178_54754852_6	chr14	-	2099	17	NNC	ENSMUSG00000023110.13	novel	2107	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTCAGTTCCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	54754852	54745177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749605_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754624
ENSMUSG00000023110.13_54745373_54754640_1	chr14	-	1237	13	FSM	ENSMUSG00000023110.13	ENST00000397440.8	1600	13	168	195	168	-127	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCGTTTCTGGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	54754640	54745372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54753562_54753649_54753953_54754073_54754624
ENSMUSG00000023110.13_54746349_54754818_1	chr14	-	1383	12	ISM	ENSMUSG00000023110.13	ENST00000397440.8	1600	13	-10	1171	-10	-1103	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGTCACCTCTAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	54754818	54746348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54753562_54753649_54753953_54754073_54754624
ENSMUSG00000023143.11_5013484_5015657_1	chr16	-	585	3	ISM	ENSMUSG00000023143.11	ENSMUST00000147567.2	2230	9	6209	331	6209	-331	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCTCGCCACTGCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	5015657	5013483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5013923_5015418_5015483_5015575
ENSMUSG00000023143.11_5013627_5016632_1	chr16	-	548	5	ISM	ENSMUSG00000023143.11	ENSMUST00000147567.2	2230	9	5234	474	5234	-474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGCACCCCACCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	5016632	5013626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5013923_5015418_5015483_5015575_5015678_5016439_5016488_5016594
ENSMUSG00000023143.11_5013674_5016692_1	chr16	-	561	5	ISM	ENSMUSG00000023143.11	ENSMUST00000147567.2	2230	9	5174	521	5174	-521	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCCTCACTTCCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	5016692	5013673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5013923_5015418_5015483_5015575_5015678_5016439_5016488_5016594
ENSMUSG00000023143.11_5013750_5016769_1	chr16	-	562	5	ISM	ENSMUSG00000023143.11	ENSMUST00000147567.2	2230	9	5097	597	5097	-597	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACATGGAGGAAACTAGC	NA	NA	NA	NA	NA	NA	NA	NA	5016769	5013749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5013923_5015418_5015483_5015575_5015678_5016439_5016488_5016594
ENSMUSG00000023143.11_5013878_5017559_1	chr16	-	545	6	ISM	ENSMUSG00000023143.11	ENSMUST00000147567.2	2230	9	4307	725	4307	-725	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGCACTGGGGTCAACG	NA	NA	NA	NA	NA	NA	NA	NA	5017559	5013877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5013923_5015418_5015483_5015575_5015678_5016439_5016488_5016594_5016801_5017479
ENSMUSG00000023143.11_5015576_5017915_1	chr16	-	594	5	ISM	ENSMUSG00000023143.11	ENSMUST00000147567.2	2230	9	3951	2423	3951	-2423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCGGCCTTAAAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	5017915	5015575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5015678_5016439_5016488_5016594_5016801_5017479_5017609_5017806
ENSMUSG00000023143.11_5016454_5019326_1	chr16	-	567	5	ISM	ENSMUSG00000023143.11	ENSMUST00000147567.2	2230	9	2540	3301	2540	-3301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTGCAGTGAAGGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	5019326	5016453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5016488_5016594_5016801_5017479_5017609_5017806_5017916_5019237
ENSMUSG00000023143.11_5016679_5021237_1	chr16	-	533	5	ISM	ENSMUSG00000023143.11	ENSMUST00000147567.2	2230	9	629	3526	629	-3526	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCACTTCTGGCGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	5021237	5016678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204
ENSMUSG00000023143.11_5016728_5021341_1	chr16	-	588	5	ISM	ENSMUSG00000023143.11	ENSMUST00000147567.2	2230	9	525	3575	525	-3575	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGACTGCAGTGGCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	5021341	5016727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204
ENSMUSG00000023143.11_5016784_5021375_1	chr16	-	566	5	ISM	ENSMUSG00000023143.11	ENSMUST00000147567.2	2230	9	491	3631	491	-3631	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCCCGCCAAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	5021375	5016783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204
ENSMUSG00000023143.11_5019331_5021866_1	chr16	-	612	3	ISM	ENSMUSG00000023143.11	ENSMUST00000023911.11	2143	10	10	6178	0	-6178	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGAGCGGAGTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	5021866	5019330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_5019378_5021204_5021664_5021760
ENSMUSG00000023147.18_95946607_95957512_1	chr16	+	887	4	FSM	ENSMUSG00000023147.18	ENSMUST00000233566.2	2415	4	-6	1534	0	355	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCTCCTTTTTATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	95946606	95957512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_95946779_95953012_95953179_95955280_95955396_95957078
ENSMUSG00000023147.18_95946607_95957851_1	chr16	+	1294	5	FSM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	0	1201	0	694	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95946606	95957851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078
ENSMUSG00000023147.18_95953010_95957664_1	chr16	+	870	3	ISM	ENSMUSG00000023147.18	ENSMUST00000233566.2	2415	4	6397	1382	6392	507	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGACGTGTATTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	95953009	95957664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_95953179_95955280_95955396_95957078
ENSMUSG00000023147.18_95953010_95958041_1	chr16	+	1315	4	ISM	ENSMUSG00000023147.18	ENSMUST00000232832.2	2678	5	6399	1011	6392	884	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCCCTAGTTACAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	95953009	95958041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_95953179_95954170_95954239_95955280_95955396_95957078
ENSMUSG00000023147.18_95954203_95958192_1	chr16	+	1265	3	ISM	ENSMUSG00000023147.18	ENSMUST00000232832.2	2678	5	7592	860	7585	-854	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCACAGCTCTGGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	95954202	95958192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_95954239_95955280_95955396_95957078
ENSMUSG00000023150.15_151220228_151235928_1	chr1	+	1645	10	ISM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	0	4245	0	3378	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGCAGAACGCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	151220227	151235928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703
ENSMUSG00000023150.15_151220329_151236703_1	chr1	+	1687	12	ISM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	101	3470	60	-3463	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATCAAATGGACACTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	151220328	151236703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682
ENSMUSG00000023150.15_151225182_151236968_1	chr1	+	1635	12	ISM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	4954	3205	4913	-3198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTATTTGATCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	151225181	151236968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893
ENSMUSG00000023150.15_151225310_151237265_1	chr1	+	1617	13	ISM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	5082	2908	5041	-2901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCAGAATCTTGGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	151225309	151237265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212
ENSMUSG00000023150.15_151225337_151237341_1	chr1	+	1666	13	ISM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	5109	2832	5068	-2825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAATGTGGCGAGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	151225336	151237341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212
ENSMUSG00000023150.15_151226806_151238894_1	chr1	+	1651	13	ISM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	6578	1279	6537	-1272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCACGCCATCAGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	151226805	151238894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUSG00000023150.15_151227300_151239001_1	chr1	+	1708	12	ISM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	7072	1172	7031	-1165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACCATTTATGCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	151227299	151239001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUSG00000023150.15_151227581_151239116_1	chr1	+	1648	11	ISM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	7353	1057	7312	-1050	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATTTAAGAACCCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	151227580	151239116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUSG00000023150.15_151229718_151231992_1	chr1	+	1328	3	ISM	ENSMUSG00000023150.15	ENSMUST00000111887.10	2783	8	9458	558	9449	-558	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGCACAGTCTGAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	151229717	151231992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151229845_151230384_151230511_151230917
ENSMUSG00000023150.15_151230385_151239318_1	chr1	+	1600	9	ISM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	10157	855	10116	-848	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATCTTTGGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	151230384	151239318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUSG00000023150.15_151230420_151239387_1	chr1	+	1634	9	ISM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	10192	786	10151	-779	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCATTTCAAGAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	151230419	151239387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUSG00000023150.15_151230471_151239439_1	chr1	+	1635	9	ISM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	10243	734	10202	-727	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAAATGACTCTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	151230470	151239439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUSG00000023150.15_151231960_151239568_1	chr1	+	1644	8	ISM	ENSMUSG00000023150.15	ENSMUST00000097543.8	3337	14	11691	598	11691	-598	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATAACAATGACTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	151231959	151239568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUSG00000023150.15_151235462_151239671_1	chr1	+	1630	7	ISM	ENSMUSG00000023150.15	ENSMUST00000097543.8	3337	14	15193	495	15193	-495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCTTTATCTGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	151235461	151239671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUSG00000023150.15_151235792_151239802_1	chr1	+	1632	6	ISM	ENSMUSG00000023150.15	ENSMUST00000097543.8	3337	14	15523	364	15523	-364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACCTTTTTTTCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	151235791	151239802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUSG00000023150.15_151235845_151239854_1	chr1	+	1631	6	ISM	ENSMUSG00000023150.15	ENSMUST00000097543.8	3337	14	15576	312	15576	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTTGCTGAATGGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	151235844	151239854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUSG00000023150.15_151236563_151240031_1	chr1	+	1630	5	ISM	ENSMUSG00000023150.15	ENSMUST00000097543.8	3337	14	16294	135	16294	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTTTCTTACCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	151236562	151240031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUSG00000023150.15_151236682_151240173_1	chr1	+	1745	4	ISM	ENSMUSG00000023150.15	ENSMUST00000097543.8	3337	14	16413	-7	16413	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTGTGGGATTTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	151236681	151240173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUSG00000023156.5_14379219_14382287_1	chr14	-	781	3	ISM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	7119	1280	-2592	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACAAATTTAAAGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	14382287	14379218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14379866_14380975_14381055_14382232
ENSMUSG00000023156.5_14379322_14385841_1	chr14	-	770	4	ISM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	3565	1383	3565	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGCTGTTGTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	14385841	14379321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771
ENSMUSG00000023156.5_14379521_14389406_1	chr14	-	819	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	0	1582	0	-302	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAGATTTTGCAAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	14389406	14379520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
ENSMUSG00000023169.16_96474012_96476632_1	chr15	-	811	3	ISM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	63211	144	63211	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATCACCCGACATGGACT	NA	NA	NA	NA	NA	NA	NA	NA	96476632	96474011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96474694_96476410_96476509_96476601
ENSMUSG00000023169.16_96474201_96477275_1	chr15	-	813	4	ISM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	62568	333	62568	-333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAAATAATCTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	96477275	96474200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195
ENSMUSG00000023169.16_96474409_96483497_1	chr15	-	812	6	ISM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	56346	541	56346	-541	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTCTCCAGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	96483497	96474408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430
ENSMUSG00000023169.16_96474612_96485031_1	chr15	-	792	8	ISM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	54812	744	54812	-744	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCGACGAAGGCCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	96485031	96474611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972
ENSMUSG00000023169.16_96476415_96488022_1	chr15	-	871	9	ISM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	51821	2547	51821	-2547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTATGTCTCTTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	96488022	96476414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940
ENSMUSG00000023169.16_96477259_96507795_1	chr15	-	798	10	ISM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	32048	3391	32048	-3391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAACCGTGCGGCTGGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	96507795	96477258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736
ENSMUSG00000023169.16_96487950_96539096_1	chr15	-	808	7	ISM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	747	14082	747	-14082	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTTCGTAAGCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	96539096	96487949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
ENSMUSG00000023169.16_96521837_96539599_1	chr15	-	879	2	ISM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	244	47969	244	-10254	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGTCTTCCCCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	96539599	96521836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96522051_96538934
ENSMUSG00000023169.16_96521944_96539633_1	chr15	-	806	2	ISM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	210	48076	210	-10361	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCTCGAGCTAACGGA	NA	NA	NA	NA	NA	NA	NA	NA	96539633	96521943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96522051_96538934
ENSMUSG00000023169.16_96522015_96539690_1	chr15	-	792	2	ISM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	153	48147	153	-10432	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAGCCTCAGAACGGAA	NA	NA	NA	NA	NA	NA	NA	NA	96539690	96522014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96522051_96538934
ENSMUSG00000023175.16_79540342_79547803_1	chr10	+	1233	6	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79540341	79547803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546769_79547327
ENSMUSG00000023175.16_79540342_79547803_2	chr10	+	1247	6	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79540341	79547803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547299
ENSMUSG00000023175.16_79540342_79547803_3	chr10	+	1239	6	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79540341	79547803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546775_79547327
ENSMUSG00000023175.16_79540342_79547803_4	chr10	+	1245	6	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79540341	79547803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546762_79547308
ENSMUSG00000023175.16_79540342_79547803_5	chr10	+	1238	6	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79540341	79547803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547308
ENSMUSG00000023186.15_38633882_38639997_1	chr9	+	1161	8	ISM	ENSMUSG00000023186.15	ENSMUST00000118144.8	3502	19	4314	14061	4314	-14061	internal_fragment	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAGGAGAGTATTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	38633881	38639997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_38634045_38634322_38634546_38634662_38634839_38635141_38635257_38638238_38638409_38639049_38639139_38639289_38639435_38639917
ENSMUSG00000023186.15_38634749_38647442_1	chr9	+	1265	10	ISM	ENSMUSG00000023186.15	ENSMUST00000118144.8	3502	19	5181	6616	5181	-6616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCTAGGCCAGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	38634748	38647442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_38634839_38635141_38635257_38638238_38638409_38639049_38639139_38639289_38639435_38639917_38639998_38645160_38645276_38645992_38646158_38646854_38646956_38647247
ENSMUSG00000023186.15_38645196_38653216_1	chr9	+	1250	9	ISM	ENSMUSG00000023186.15	ENSMUST00000118144.8	3502	19	15628	842	15628	-842	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGGAGTTTCGAGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	38645195	38653216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_38645276_38645992_38646158_38646854_38646956_38647247_38647502_38649038_38649105_38649198_38649298_38649781_38649913_38652393_38652521_38652989
ENSMUSG00000023186.15_38649845_38654058_1	chr9	+	1264	3	ISM	ENSMUSG00000023186.15	ENSMUST00000118144.8	3502	19	20277	0	20277	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATTGGAGATTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	38649844	38654058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_38649913_38652393_38652521_38652989
ENSMUSG00000023216.14_120851966_120859574_1	chr2	-	1215	8	ISM	ENSMUSG00000023216.14	ENST00000540029.5	1655	10	5497	80	5497	-80	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACAACTCCTTAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	120859574	120851965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120852014_120852212_120852374_120854965_120855266_120856224_120856468_120857176_120857281_120857562_120857702_120858124_120858303_120859532
ENSMUSG00000023216.14_120852308_120860524_1	chr2	-	1211	8	ISM	ENSMUSG00000023216.14	ENST00000540029.5	1655	10	4547	422	4547	-422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGAGTCACGGCAATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	120860524	120852307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120852374_120854965_120855266_120856224_120856468_120857176_120857281_120857562_120857702_120858124_120858303_120859532_120859638_120860448
ENSMUSG00000023216.14_120854983_120864930_1	chr2	-	1208	8	ISM	ENSMUSG00000023216.14	ENST00000540029.5	1655	10	141	3097	141	-852	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCAAACCCAACCAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	120864930	120854982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120855266_120856224_120856468_120857176_120857281_120857562_120857702_120858124_120858303_120859532_120859638_120860448_120860568_120864893
ENSMUSG00000023216.14_120855028_120864992_1	chr2	-	1225	8	ISM	ENSMUSG00000023216.14	ENST00000540029.5	1655	10	79	3142	79	-897	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGTCCTCGCTGCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	120864992	120855027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120855266_120856224_120856468_120857176_120857281_120857562_120857702_120858124_120858303_120859532_120859638_120860448_120860568_120864893
ENSMUSG00000023216.14_120855095_120865043_1	chr2	-	1209	8	ISM	ENSMUSG00000023216.14	ENST00000540029.5	1655	10	28	3209	28	-964	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTAACCCCACAGACGAG	NA	NA	NA	NA	NA	NA	NA	NA	120865043	120855094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120855266_120856224_120856468_120857176_120857281_120857562_120857702_120858124_120858303_120859532_120859638_120860448_120860568_120864893
ENSMUSG00000023224.13_84595850_84603935_1	chr2	-	1479	6	ISM	ENSMUSG00000023224.13	ENSMUST00000023994.10	1768	8	1813	119	1283	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCCACTTCAAGCCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	84603935	84595849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_84596172_84597618_84597839_84600117_84600255_84600436_84600641_84601768_84601904_84603474
ENSMUSG00000023224.13_84595850_84603935_2	chr2	-	1416	6	ISM	ENSMUSG00000023224.13	ENST00000677625.1	1539	7	1283	-65	1283	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCCACTTCAAGCCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	84603935	84595849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_84596172_84597618_84597776_84600117_84600255_84600436_84600641_84601768_84601904_84603474
ENSMUSG00000023224.13_84595850_84605100_1	chr2	-	1486	7	FSM	ENSMUSG00000023224.13	ENST00000677625.1	1539	7	118	-65	118	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCCACTTCAAGCCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	84605100	84595849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_84596172_84597618_84597776_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083
ENSMUSG00000023224.13_84596033_84605140_1	chr2	-	1343	7	FSM	ENSMUSG00000023224.13	ENST00000677625.1	1539	7	78	118	78	-118	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGCCGAAGCTTACCCA	NA	NA	NA	NA	NA	NA	NA	NA	84605140	84596032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_84596172_84597618_84597776_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083
ENSMUSG00000023224.13_84596041_84605142_1	chr2	-	1400	7	ISM	ENSMUSG00000023224.13	ENSMUST00000023994.10	1768	8	606	310	76	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCTCCTTTGGCCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	84605142	84596040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_84596172_84597618_84597839_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083
ENSMUSG00000023224.13_84596077_84605212_1	chr2	-	1371	7	FSM	ENSMUSG00000023224.13	ENST00000677625.1	1539	7	6	162	6	-162	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGAGTCAGGGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	84605212	84596076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_84596172_84597618_84597776_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083
ENSMUSG00000023232.18_130147798_130152087_1	chr4	-	338	3	ISM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	16924	510	16924	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGGCGGGGCTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	130152087	130147797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_130147859_130149148_130149359_130152020
ENSMUSG00000023232.18_130147832_130152161_1	chr4	-	378	3	ISM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	16850	544	16850	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGACCTCAGTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	130152161	130147831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_130147859_130149148_130149359_130152020
ENSMUSG00000023232.18_130149236_130154457_1	chr4	-	372	4	ISM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	14554	1948	14554	-1544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTCACCTACAGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	130154457	130149235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_130149359_130152020_130152157_130152493_130152585_130154435
ENSMUSG00000023232.18_130149288_130154509_1	chr4	-	372	4	ISM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	14502	2000	14502	-1596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCAGCAGGTGGCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	130154509	130149287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_130149359_130152020_130152157_130152493_130152585_130154435
ENSMUSG00000023232.18_130149344_130154556_1	chr4	-	363	4	ISM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	14455	2056	14455	-1652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCGTCAGGTGAACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	130154556	130149343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_130149359_130152020_130152157_130152493_130152585_130154435
ENSMUSG00000023232.18_130152494_130156882_1	chr4	-	323	3	ISM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	12129	5206	12129	-4802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACGAGACAAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	130156882	130152493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_130152585_130154435_130154606_130156820
ENSMUSG00000023232.18_130154526_130158130_1	chr4	-	375	4	ISM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	10881	7238	10881	-6834	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCCTGCCATGAGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	130158130	130154525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_130154606_130156820_130156959_130157374_130157455_130158053
ENSMUSG00000023232.18_130158050_130168901_1	chr4	-	379	3	ISM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	110	10762	110	-10358	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCGGCCACCTACACCCT	NA	NA	NA	NA	NA	NA	NA	NA	130168901	130158049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_130158245_130158861_130159024_130168879
ENSMUSG00000023232.18_130158158_130169325_1	chr4	-	324	3	ISM	ENSMUSG00000023232.18	ENSMUST00000105996.8	1878	10	54	10870	54	-10466	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACCGTATGTGCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	130169325	130158157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_130158245_130158861_130159024_130169250
ENSMUSG00000023249.16_106347826_106351032_1	chr9	-	1350	5	ISM	ENSMUSG00000023249.16	ENSMUST00000123555.8	2495	11	2543	0	2543	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCTGTCCGACTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	106351032	106347825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106348602_106348958_106349115_106350227_106350406_106350631_106350719_106350879
ENSMUSG00000023249.16_106348188_106351719_1	chr9	-	1339	7	ISM	ENSMUSG00000023249.16	ENSMUST00000112479.9	2030	11	2149	0	1856	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACGTTTTGAAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	106351719	106348187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106348602_106348958_106349115_106350227_106350406_106350631_106350719_106350879_106351033_106351256_106351484_106351595
ENSMUSG00000023249.16_106348326_106351948_1	chr9	-	1271	8	ISM	ENSMUSG00000023249.16	ENSMUST00000123555.8	2495	11	1627	500	1627	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATTGGCACACACCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	106351948	106348325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106348602_106348958_106349115_106350227_106350406_106350631_106350719_106350879_106351033_106351256_106351484_106351595_106351720_106351878
ENSMUSG00000023249.16_106348474_106352240_1	chr9	-	1261	9	ISM	ENSMUSG00000023249.16	ENSMUST00000123555.8	2495	11	1335	648	1335	-286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTGTCGCCTGCGCTA	NA	NA	NA	NA	NA	NA	NA	NA	106352240	106348473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106348602_106348958_106349115_106350227_106350406_106350631_106350719_106350879_106351033_106351256_106351484_106351595_106351720_106351878_106352068_106352221
ENSMUSG00000023249.16_106348492_106352334_1	chr9	-	1337	9	ISM	ENSMUSG00000023249.16	ENSMUST00000123555.8	2495	11	1241	666	1241	-304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTCATATACAAGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	106352334	106348491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106348602_106348958_106349115_106350227_106350406_106350631_106350719_106350879_106351033_106351256_106351484_106351595_106351720_106351878_106352068_106352221
ENSMUSG00000023249.16_106348581_106352347_1	chr9	-	1261	9	ISM	ENSMUSG00000023249.16	ENSMUST00000123555.8	2495	11	1228	755	1228	-393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAACTGGATGGGCAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	106352347	106348580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106348602_106348958_106349115_106350227_106350406_106350631_106350719_106350879_106351033_106351256_106351484_106351595_106351720_106351878_106352068_106352221
ENSMUSG00000023249.16_106349003_106353106_1	chr9	-	1305	9	ISM	ENSMUSG00000023249.16	ENSMUST00000123555.8	2495	11	469	1177	469	-815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCTTTGACAGCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	106353106	106349002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106349115_106350227_106350406_106350631_106350719_106350879_106351033_106351256_106351484_106351595_106351720_106351878_106352068_106352221_106352348_106352997
ENSMUSG00000023249.16_106349080_106353142_1	chr9	-	1264	9	ISM	ENSMUSG00000023249.16	ENSMUST00000123555.8	2495	11	433	1254	433	-892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTTCCTGGGCGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	106353142	106349079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106349115_106350227_106350406_106350631_106350719_106350879_106351033_106351256_106351484_106351595_106351720_106351878_106352068_106352221_106352348_106352997
ENSMUSG00000023249.16_106350281_106353303_1	chr9	-	1238	9	ISM	ENSMUSG00000023249.16	ENSMUST00000123555.8	2495	11	272	2455	272	-2093	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCAAGGGTATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	106353303	106350280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106350406_106350631_106350719_106350879_106351033_106351256_106351484_106351595_106351720_106351878_106352068_106352221_106352348_106352997_106353182_106353280
ENSMUSG00000023249.16_106350671_106353575_1	chr9	-	1346	8	ISM	ENSMUSG00000023249.16	ENSMUST00000123555.8	2495	11	0	2845	0	-2483	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGCGGCATGTTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	106353575	106350670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106350719_106350879_106351033_106351256_106351484_106351595_106351720_106351878_106352068_106352221_106352348_106352997_106353182_106353280
ENSMUSG00000023259.18_108732861_108739365_1	chr9	+	2058	17	ISM	ENSMUSG00000023259.18	ENST00000358747.10	2615	20	63	2681	63	-2681	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTGCCTCAGCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	108732860	108739365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738601_108739304
ENSMUSG00000023259.18_108733019_108735037_1	chr9	+	620	6	ISM	ENSMUSG00000023259.18	ENST00000337000.12	2120	18	44	7009	44	-7009	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCACCCAAGACAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	108733018	108735037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108733142_108733221_108733362_108733530_108733642_108734394_108734544_108734864_108734948_108735023
ENSMUSG00000023259.18_108733079_108735080_1	chr9	+	603	6	ISM	ENSMUSG00000023259.18	ENST00000337000.12	2120	18	104	6966	104	-6966	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCATTGCTGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	108733078	108735080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108733142_108733221_108733362_108733530_108733642_108734394_108734544_108734864_108734948_108735023
ENSMUSG00000023259.18_108733111_108739683_1	chr9	+	1957	18	ISM	ENSMUSG00000023259.18	ENST00000358747.10	2615	20	313	2363	136	-2363	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTGAATGGGGACGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	108733110	108739683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738601_108739304_108739458_108739626
ENSMUSG00000023259.18_108733221_108741615_1	chr9	+	2063	18	ISM	ENSMUSG00000023259.18	ENST00000358747.10	2615	20	423	431	246	-431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGCCGCAGCCACACT	NA	NA	NA	NA	NA	NA	NA	NA	108733220	108741615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738601_108739304_108739458_108739626_108739682_108741477
ENSMUSG00000023259.18_108733303_108735444_1	chr9	+	599	6	ISM	ENSMUSG00000023259.18	ENST00000337000.12	2120	18	328	6602	328	-6602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCCGTGAGCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	108733302	108735444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108733362_108733530_108733642_108734394_108734544_108734864_108734948_108735023_108735172_108735395
ENSMUSG00000023259.18_108733579_108741899_1	chr9	+	1936	18	ISM	ENSMUSG00000023259.18	ENST00000358747.10	2615	20	781	147	604	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGAAACCCCCTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	108733578	108741899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738601_108739304_108739458_108739626_108739682_108741477_108741615_108741836
ENSMUSG00000023259.18_108733617_108741965_1	chr9	+	1964	18	ISM	ENSMUSG00000023259.18	ENST00000358747.10	2615	20	819	81	642	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACAATTCATGGATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	108733616	108741965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738601_108739304_108739458_108739626_108739682_108741477_108741615_108741836
ENSMUSG00000023259.18_108733874_108742096_1	chr9	+	2071	17	ISM	ENSMUSG00000023259.18	ENST00000358747.10	2615	20	1076	-50	899	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTCTGTCCAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	108733873	108742096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738601_108739304_108739458_108739626_108739682_108741477_108741615_108741836
ENSMUSG00000023262.14_106310276_106313999_1	chr9	-	856	10	ISM	ENSMUSG00000023262.14	ENSMUST00000216400.2	1030	12	937	0	937	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCTTCCAACTCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	106313999	106310275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106313373_106313420_106313894
ENSMUSG00000023262.14_106310276_106314936_1	chr9	-	1246	14	ISM	ENSMUSG00000023262.14	ENSMUST00000024031.13	1529	15	582	96	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCTTCCAACTCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	106314936	106310275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827
ENSMUSG00000023262.14_106310558_106314152_1	chr9	-	755	10	ISM	ENSMUSG00000023262.14	ENSMUST00000216400.2	1030	12	784	282	784	-282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTCACTTGCAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	106314152	106310557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106313373_106313420_106313894_106314000_106314087
ENSMUSG00000023262.14_106310765_106314936_1	chr9	-	801	10	ISM	ENSMUSG00000023262.14	ENSMUST00000216400.2	1030	12	0	489	0	-489	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	979	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCACTGACCAGCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	106314936	106310764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106313373_106313420_106313894_106314000_106314087_106314153_106314827
ENSMUSG00000023262.14_106310765_106315518_1	chr9	-	1204	13	ISM	ENSMUSG00000023262.14	ENSMUST00000024031.13	1529	15	0	585	0	-489	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCACTGACCAGCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	106315518	106310764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314937_106315331
ENSMUSG00000023262.14_106311729_106315360_1	chr9	-	731	10	ISM	ENSMUSG00000023262.14	ENST00000494103.5	1127	13	86	1453	27	-1453	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGACTTGGGACCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	106315360	106311728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106313373_106313420_106313894_106314000_106314087_106314153_106314827_106314933_106315345
ENSMUSG00000023262.14_106311966_106312872_1	chr9	-	303	5	ISM	ENSMUSG00000023262.14	ENST00000476351.5	1238	14	2574	1690	2064	-1690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGCGTGGCCTATAATG	NA	NA	NA	NA	NA	NA	NA	NA	106312872	106311965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813
ENSMUSG00000023262.14_106313323_106315360_1	chr9	-	282	4	ISM	ENSMUSG00000023262.14	ENST00000476351.5	1238	14	86	3047	27	-3047	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATCCCCCATTCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	106315360	106313322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106313420_106313894_106313960_106314827_106314933_106315345
ENSMUSG00000023272.5_88703849_88709406_1	chr15	+	982	9	ISM	ENSMUSG00000023272.5	ENSMUST00000024042.5	1366	10	0	1480	0	-82	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACAATGTTCCGGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	88703848	88709406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706161_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352
ENSMUSG00000023272.5_88703997_88710620_1	chr15	+	952	10	FSM	ENSMUSG00000023272.5	ENSMUST00000024042.5	1366	10	148	266	148	-266	multi-exon	FALSE	canonical	NA	NA	NA	NA	1994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCGTGAGGATTTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	88703996	88710620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706161_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
ENSMUSG00000023272.5_88704017_88710703_1	chr15	+	1015	10	FSM	ENSMUSG00000023272.5	ENSMUST00000024042.5	1366	10	168	183	168	-183	multi-exon	FALSE	canonical	NA	NA	NA	NA	2336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCCCATGGACATGAACC	NA	NA	NA	NA	NA	NA	NA	NA	88704016	88710703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706161_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
ENSMUSG00000023272.5_88704773_88710886_1	chr15	+	1053	8	ISM	ENSMUSG00000023272.5	ENSMUST00000024042.5	1366	10	924	0	924	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGACGTGTTGGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	88704772	88710886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88704843_88705337_88705430_88706161_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
ENSMUSG00000023272.5_88704775_88710886_1	chr15	+	1045	8	NNC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	926	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGACGTGTTGGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	88704774	88710886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_88704843_88705337_88705430_88706161_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709358_88709494_88710589
ENSMUSG00000023272.5_88706253_88708946_1	chr15	+	277	3	NNC	ENSMUSG00000023272.5	novel	503	4	NA	NA	89	-542	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGAGCTGTCTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	88706252	88708946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_88706339_88707269_88707366_88708851
ENSMUSG00000023272.5_88706259_88709416_1	chr15	+	336	4	FSM	ENSMUSG00000023272.5	ENST00000403427.3	503	4	95	72	95	-72	multi-exon	FALSE	canonical	NA	NA	NA	NA	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGGAGCTTCGTGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	88706258	88709416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_88706339_88707269_88707366_88708850_88708947_88709352
ENSMUSG00000023272.5_88707267_88709489_1	chr15	+	328	3	NNC	ENSMUSG00000023272.5	novel	503	4	NA	NA	1103	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTGAGTGGCAGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	88707266	88709489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_88707362_88708850_88708947_88709352
ENSMUSG00000023277.14_106080344_106092075_1	chr9	+	867	8	FSM	ENSMUSG00000023277.14	ENST00000678838.1	1402	8	22	513	22	-511	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTACATCCCAAGCAACAC	NA	NA	NA	NA	NA	NA	NA	NA	106080343	106092075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_106080484_106084087_106084166_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ENSMUSG00000023277.14_106080344_106092178_1	chr9	+	970	8	FSM	ENSMUSG00000023277.14	ENST00000678838.1	1402	8	22	410	22	-408	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGAAGACAGCTAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	106080343	106092178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_106080484_106084087_106084166_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ENSMUSG00000023277.14_106080344_106092456_1	chr9	+	1421	9	NNC	ENSMUSG00000023277.14	novel	1596	9	NA	NA	22	-130	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGCTGTGGTTGCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	106080343	106092456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090142_106090263_106091299_106091451_106091554_106091677_106092026
ENSMUSG00000023277.14_106080344_106092481_1	chr9	+	1452	9	FSM	ENSMUSG00000023277.14	ENSMUST00000024047.12	1596	9	37	107	22	-105	multi-exon	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTTTGGCTACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	106080343	106092481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ENSMUSG00000023277.14_106080344_106092584_1	chr9	+	1549	9	NNC	ENSMUSG00000023277.14	novel	1596	9	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATACTGAGCCTGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	106080343	106092584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092032
ENSMUSG00000023277.14_106080344_106092584_2	chr9	+	1549	9	NNC	ENSMUSG00000023277.14	novel	1596	9	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	932	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATACTGAGCCTGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	106080343	106092584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090142_106090263_106091299_106091451_106091554_106091677_106092026
ENSMUSG00000023277.14_106080344_106092584_3	chr9	+	1550	9	NNC	ENSMUSG00000023277.14	novel	1596	9	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATACTGAGCCTGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	106080343	106092584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_106080484_106084087_106084166_106088922_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ENSMUSG00000023277.14_106083997_106092178_1	chr9	+	921	7	ISM	ENSMUSG00000023277.14	ENST00000678838.1	1402	8	3675	410	0	-408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGAAGACAGCTAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	106083996	106092178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106084166_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ENSMUSG00000023286.17_156028307_156042168_1	chr4	+	1377	7	NNC	ENSMUSG00000023286.17	novel	1375	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTGTGTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	156028306	156042168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_156028471_156033468_156033687_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUSG00000023286.17_156028367_156041558_1	chr4	+	620	7	FSM	ENSMUSG00000023286.17	ENSMUST00000103175.8	1309	7	79	610	41	-266	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACAAGATGAACTAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	156028366	156041558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_156028471_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUSG00000023286.17_156028367_156041940_1	chr4	+	1165	8	FSM	ENSMUSG00000023286.17	ENSMUST00000105583.9	1434	8	41	228	41	-83	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACCTTAAAGAGAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	156028366	156041940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_156028471_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUSG00000023286.17_156028367_156042168_1	chr4	+	1322	7	FSM	ENSMUSG00000023286.17	ENST00000347370.6	1375	7	73	-20	41	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTGTGTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	156028366	156042168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_156028471_156033463_156033687_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUSG00000023286.17_156028457_156041940_1	chr4	+	1075	8	FSM	ENSMUSG00000023286.17	ENSMUST00000105583.9	1434	8	131	228	8	-83	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACCTTAAAGAGAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	156028456	156041940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_156028471_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUSG00000023286.17_156028457_156044061_1	chr4	+	3333	8	FSM	ENSMUSG00000023286.17	ENSMUST00000024056.10	3483	8	150	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTGCCTTGTTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	156028456	156044061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_156028608_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUSG00000023286.17_156028615_156041824_1	chr4	+	798	7	FSM	ENSMUSG00000023286.17	ENST00000360466.6	989	7	191	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACAAGCCACAGCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	156028614	156041824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_156028631_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUSG00000023286.17_156030804_156042168_1	chr4	+	1197	7	ISM	ENSMUSG00000023286.17	ENSMUST00000105581.5	1391	8	2189	0	2189	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTGTGTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	156030803	156042168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUSG00000023307.15_37188206_37198860_1	chr19	+	621	5	ISM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	3264	690	3239	385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACACCGCAAAATCCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	37188205	37198860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
ENSMUSG00000023307.15_37197788_37199117_1	chr19	+	594	3	ISM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	12846	433	12821	-433	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTAAACCATTATTTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	37197787	37199117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_37197886_37198037_37198205_37198788
ENSMUSG00000023307.15_37197839_37199182_1	chr19	+	608	3	ISM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	12897	368	12872	-368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATAAAACTGTACAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	37197838	37199182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_37197886_37198037_37198205_37198788
ENSMUSG00000023307.15_37198136_37199376_1	chr19	+	657	2	ISM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	13194	174	13169	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAACAAACCCAGAAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	37198135	37199376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_37198205_37198788
ENSMUSG00000023330.13_126001749_126006739_1	chr2	+	291	2	ISM	ENSMUSG00000023330.13	ENST00000251250.7	628	3	1421	132	1421	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTACTTCCTAGTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	126001748	126006739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_126001949_126006648
ENSMUSG00000023330.13_126001787_126006767_1	chr2	+	280	2	NNC	ENSMUSG00000023330.13	novel	628	3	NA	NA	1459	-104	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCGTGCAGAAAGAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	126001786	126006767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_126001949_126006649
ENSMUSG00000023330.13_126001846_126006856_1	chr2	+	310	2	NNC	ENSMUSG00000023330.13	novel	628	3	NA	NA	1518	-15	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCTGGAGAGAAGGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	126001845	126006856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_126001949_126006649
ENSMUSG00000023330.13_126001853_126006851_1	chr2	+	299	2	ISM	ENSMUSG00000023330.13	ENST00000251250.7	628	3	1525	20	1525	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGCTCTGGAGAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	126001852	126006851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_126001949_126006648
ENSMUSG00000023341.16_97345718_97348638_1	chr16	+	676	5	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	46	13144	46	-13144	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGTGCAGAGGTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	97345717	97348638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97345861_97346811_97346950_97347524_97347680_97347946_97348086_97348537
ENSMUSG00000023341.16_97345753_97348704_1	chr16	+	707	5	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	81	13078	81	-13078	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATCTTCTTCAAGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	97345752	97348704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97345861_97346811_97346950_97347524_97347680_97347946_97348086_97348537
ENSMUSG00000023341.16_97345825_97352118_1	chr16	+	689	6	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	153	9664	153	-9664	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACAGTGCCCTGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	97345824	97352118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97345861_97346811_97346950_97347524_97347680_97347946_97348086_97348537_97348737_97352096
ENSMUSG00000023341.16_97346819_97352614_1	chr16	+	722	6	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	1147	9168	1147	-9168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATCAAATAAAGGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	97346818	97352614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97346950_97347524_97347680_97347946_97348086_97348537_97348737_97352096_97352176_97352595
ENSMUSG00000023341.16_97346894_97352648_1	chr16	+	681	6	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	1222	9134	1222	-9134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGAGCTGCAGAAGTACG	NA	NA	NA	NA	NA	NA	NA	NA	97346893	97352648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97346950_97347524_97347680_97347946_97348086_97348537_97348737_97352096_97352176_97352595
ENSMUSG00000023341.16_97346930_97352718_1	chr16	+	715	6	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	1258	9064	1258	-9064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTGTCTATGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	97346929	97352718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97346950_97347524_97347680_97347946_97348086_97348537_97348737_97352096_97352176_97352595
ENSMUSG00000023341.16_97347608_97353191_1	chr16	+	680	6	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	1936	8591	1936	-8591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCGCCTATTCACCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	97347607	97353191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97347680_97347946_97348086_97348537_97348737_97352096_97352176_97352595_97352719_97353123
ENSMUSG00000023341.16_97347944_97357878_1	chr16	+	763	6	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	2272	3904	2272	-3904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAACCAAATTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	97347943	97357878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97348086_97348537_97348737_97352096_97352176_97352595_97352719_97353123_97353267_97357801
ENSMUSG00000023341.16_97348048_97359747_1	chr16	+	687	7	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	2376	2035	2376	-2035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGGAAGCAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	97348047	97359747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97348086_97348537_97348737_97352096_97352176_97352595_97352719_97353123_97353267_97357801_97357879_97359719
ENSMUSG00000023341.16_97348563_97359830_1	chr16	+	707	6	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	2891	1952	2891	-1952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTGCAGAAGGTCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	97348562	97359830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97348737_97352096_97352176_97352595_97352719_97353123_97353267_97357801_97357879_97359719
ENSMUSG00000023341.16_97348628_97359867_1	chr16	+	679	6	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	2956	1915	2956	-1915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAGACAAAGCATGGC	NA	NA	NA	NA	NA	NA	NA	NA	97348627	97359867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97348737_97352096_97352176_97352595_97352719_97353123_97353267_97357801_97357879_97359719
ENSMUSG00000023341.16_97348642_97359968_1	chr16	+	766	6	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	2970	1814	2970	-1814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGTGTGAACACATTG	NA	NA	NA	NA	NA	NA	NA	NA	97348641	97359968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97348737_97352096_97352176_97352595_97352719_97353123_97353267_97357801_97357879_97359719
ENSMUSG00000023341.16_97348679_97359968_1	chr16	+	729	6	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	3007	1814	3007	-1814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	772	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGTGTGAACACATTG	NA	NA	NA	NA	NA	NA	NA	NA	97348678	97359968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97348737_97352096_97352176_97352595_97352719_97353123_97353267_97357801_97357879_97359719
ENSMUSG00000023341.16_97352138_97361604_1	chr16	+	696	6	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	6466	178	6466	-178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGCGGCTGCAGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	97352137	97361604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97352176_97352595_97352719_97353123_97353267_97357801_97357879_97359719_97359969_97361538
ENSMUSG00000023341.16_97352638_97361718_1	chr16	+	730	5	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	6966	64	6966	-64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1032	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCAAGGCTGGCCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	97352637	97361718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97352719_97353123_97353267_97357801_97357879_97359719_97359969_97361538
ENSMUSG00000023345.18_106158260_106182532_1	chr9	+	1257	8	ISM	ENSMUSG00000023345.18	ENSMUST00000191434.2	1242	10	-319	44559	0	-44526	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAAAGAATGGCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	106158259	106182532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106158656_106160053_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463
ENSMUSG00000023345.18_106158396_106185199_1	chr9	+	1181	9	ISM	ENSMUSG00000023345.18	ENSMUST00000191434.2	1242	10	-183	41892	-57	-41859	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCACCCCTAACCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	106158395	106185199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106158656_106160053_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139
ENSMUSG00000023345.18_106158579_106165305_1	chr9	+	735	6	ISM	ENSMUSG00000023345.18	ENSMUST00000191434.2	1242	10	0	61786	0	-61753	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTTGAGCAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	106158578	106165305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106158656_106160053_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189
ENSMUSG00000023345.18_106158579_106207109_1	chr9	+	1072	10	ISM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	319	20611	0	-19949	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTGGAGTCAGTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	106158578	106207109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071
ENSMUSG00000023345.18_106158579_106207188_1	chr9	+	1151	10	ISM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	319	20532	0	-19870	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCCAGCTGGACATCCT	NA	NA	NA	NA	NA	NA	NA	NA	106158578	106207188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071
ENSMUSG00000023345.18_106160083_106227064_1	chr9	+	1253	10	ISM	ENSMUSG00000023345.18	ENSMUST00000217213.2	1398	11	1274	11	1274	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCCACCTGAGAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	106160082	106227064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
ENSMUSG00000023345.18_106162657_106226932_1	chr9	+	687	7	ISM	ENSMUSG00000023345.18	ENSMUST00000191434.2	1242	10	4078	159	3848	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCCTGGAGAACCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	106162656	106226932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106226880
ENSMUSG00000023345.18_106162680_106227294_1	chr9	+	1170	8	ISM	ENSMUSG00000023345.18	ENSMUST00000217213.2	1398	11	3871	-219	3871	203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTCTCTCTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	106162679	106227294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
ENSMUSG00000023345.18_106162704_106226974_1	chr9	+	682	7	ISM	ENSMUSG00000023345.18	ENSMUST00000191434.2	1242	10	4125	117	3895	-84	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGATGAGGGGAGCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	106162703	106226974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106226880
ENSMUSG00000023345.18_106162730_106227403_1	chr9	+	1229	8	ISM	ENSMUSG00000023345.18	ENSMUST00000217213.2	1398	11	3921	-328	3921	312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCTCCTCTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	106162729	106227403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
ENSMUSG00000023345.18_106162753_106227064_1	chr9	+	723	7	ISM	ENSMUSG00000023345.18	ENSMUST00000191434.2	1242	10	4174	27	3944	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCCACCTGAGAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	106162752	106227064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106226880
ENSMUSG00000023345.18_106172382_106227720_1	chr9	+	1238	5	ISM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	14122	0	13573	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGCTTTGCCTGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	106172381	106227720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
ENSMUSG00000023345.18_106172446_106227720_1	chr9	+	1174	5	ISM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	14186	0	13637	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGCTTTGCCTGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	106172445	106227720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
ENSMUSG00000023348.12_137307916_137310305_1	chr5	-	991	4	ISM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	2361	0	2147	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTCTGCTGGTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	137310305	137307915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137308437_137308546_137308668_137308914_137309094_137310135
ENSMUSG00000023348.12_137308049_137310422_1	chr5	-	879	5	ISM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	2244	133	2030	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTAAGTTCCAGGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	137310422	137308048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137308437_137308546_137308668_137308914_137309094_137310135_137310306_137310401
ENSMUSG00000023348.12_137308078_137310495_1	chr5	-	923	5	ISM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	2171	162	1957	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGAGTTTGAGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	137310495	137308077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137308437_137308546_137308668_137308914_137309094_137310135_137310306_137310401
ENSMUSG00000023348.12_137308357_137311110_1	chr5	-	787	6	ISM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	1556	441	1342	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGCCTGGCGTATCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	137311110	137308356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137308437_137308546_137308668_137308914_137309094_137310135_137310306_137310401_137310496_137310967
ENSMUSG00000023348.12_137308546_137311351_1	chr5	-	949	5	ISM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	1315	630	1101	-630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGGGGGTCCCTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	137311351	137308545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137308668_137308914_137309094_137310135_137310306_137310401_137310496_137310967
ENSMUSG00000023348.12_137308637_137311634_1	chr5	-	880	6	ISM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	1032	721	818	-721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCCATCATGCCGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	137311634	137308636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137308668_137308914_137309094_137310135_137310306_137310401_137310496_137310967_137311352_137311612
ENSMUSG00000023348.12_137309021_137311912_1	chr5	-	917	6	ISM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	754	1105	540	-1105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCCTGGTTGCTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	137311912	137309020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137309094_137310135_137310306_137310401_137310496_137310967_137311352_137311612_137311739_137311842
ENSMUSG00000023348.12_137310188_137312248_1	chr5	-	877	6	ISM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	418	2272	204	1029	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCACTTCTATGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	137312248	137310187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137310306_137310401_137310496_137310967_137311352_137311612_137311739_137311842_137311971_137312221
ENSMUSG00000023348.12_137310237_137312302_1	chr5	-	882	6	ISM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	364	2321	150	980	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATATTGGTTGCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	137312302	137310236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137310306_137310401_137310496_137310967_137311352_137311612_137311739_137311842_137311971_137312221
ENSMUSG00000023348.12_137310291_137312426_1	chr5	-	952	6	ISM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	240	2375	26	926	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCGAAGATGTGGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	137312426	137310290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137310306_137310401_137310496_137310967_137311352_137311612_137311739_137311842_137311971_137312221
ENSMUSG00000023353.15_24657332_24687414_1	chr5	+	990	8	FSM	ENSMUSG00000023353.15	ENST00000479901.5	1883	8	127	766	127	-766	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGGCCGCCGAGCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	24657331	24687414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24687263
ENSMUSG00000023353.15_24681375_24698124_1	chr5	+	1165	10	ISM	ENSMUSG00000023353.15	ENST00000463381.5	2530	15	-1	8911	-1	-8911	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGGCAGCTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	24681374	24698124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955
ENSMUSG00000023353.15_24681388_24687685_1	chr5	+	1048	7	ISM	ENSMUSG00000023353.15	ENST00000479901.5	1883	8	24183	495	12	-495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTCCTGCATGGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	24681387	24687685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24687263
ENSMUSG00000023353.15_24681662_24704702_1	chr5	+	1121	10	ISM	ENSMUSG00000023353.15	ENST00000463381.5	2530	15	286	2333	286	-2333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCATTTTGAGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	24681661	24704702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655
ENSMUSG00000023353.15_24681900_24704810_1	chr5	+	1174	9	ISM	ENSMUSG00000023353.15	ENST00000463381.5	2530	15	524	2225	524	-2225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCAGGGGTGGTAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	24681899	24704810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655
ENSMUSG00000023353.15_24681952_24687915_1	chr5	+	1093	5	ISM	ENSMUSG00000023353.15	ENST00000479901.5	1883	8	24747	265	576	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTGCCGCAAAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	24681951	24687915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24687263
ENSMUSG00000023353.15_24682064_24705003_1	chr5	+	1180	9	ISM	ENSMUSG00000023353.15	ENST00000463381.5	2530	15	688	2032	688	-2032	internal_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACGAGGCCAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	24682063	24705003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912
ENSMUSG00000023353.15_24682185_24705177_1	chr5	+	1116	10	ISM	ENSMUSG00000023353.15	ENST00000463381.5	2530	15	809	1858	809	-1858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCGACACCTGGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	24682184	24705177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120
ENSMUSG00000023353.15_24682791_24688182_1	chr5	+	1128	3	ISM	ENSMUSG00000023353.15	ENST00000479901.5	1883	8	25586	-2	1415	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTCTTGGTTCCTTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	24682790	24688182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24682872_24683007_24683136_24687263
ENSMUSG00000023353.15_24682845_24688182_1	chr5	+	1074	3	ISM	ENSMUSG00000023353.15	ENST00000479901.5	1883	8	25640	-2	1469	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTCTTGGTTCCTTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	24682844	24688182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24682872_24683007_24683136_24687263
ENSMUSG00000023353.15_24683069_24706052_1	chr5	+	1107	9	ISM	ENSMUSG00000023353.15	ENST00000463381.5	2530	15	1693	983	1693	-983	internal_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGCCCCGCTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	24683068	24706052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007
ENSMUSG00000023353.15_24683082_24706140_1	chr5	+	1182	9	ISM	ENSMUSG00000023353.15	ENST00000463381.5	2530	15	1706	895	1706	-895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCTGGCCCACGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	24683081	24706140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007
ENSMUSG00000023353.15_24684751_24706263_1	chr5	+	1129	8	ISM	ENSMUSG00000023353.15	ENST00000463381.5	2530	15	3375	772	3375	-772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTTGAGTGATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	24684750	24706263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007
ENSMUSG00000023353.15_24688353_24706471_1	chr5	+	1155	8	ISM	ENSMUSG00000023353.15	ENST00000463381.5	2530	15	6977	564	6977	-564	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCAGACATCTTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	24688352	24706471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ENSMUSG00000023353.15_24697979_24706664_1	chr5	+	1141	6	ISM	ENSMUSG00000023353.15	ENST00000463381.5	2530	15	16603	371	16603	-371	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGGTGTGCAGAGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	24697978	24706664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ENSMUSG00000023353.15_24698050_24706706_1	chr5	+	1112	6	ISM	ENSMUSG00000023353.15	ENST00000463381.5	2530	15	16674	329	16674	-329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGGTTTGGGGTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	24698049	24706706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ENSMUSG00000023353.15_24704718_24706810_1	chr5	+	1079	5	ISM	ENSMUSG00000023353.15	ENST00000463381.5	2530	15	23342	225	23342	-225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCAGGACCTCTCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	24704717	24706810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ENSMUSG00000023353.15_24704737_24706892_1	chr5	+	1142	5	ISM	ENSMUSG00000023353.15	ENST00000463381.5	2530	15	23361	143	23361	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACACAGGATGGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	24704736	24706892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ENSMUSG00000023353.15_24704936_24707035_1	chr5	+	1188	4	ISM	ENSMUSG00000023353.15	ENST00000463381.5	2530	15	23560	0	23560	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTTCTCCTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	24704935	24707035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24705004_24705120_24705344_24706007_24706264_24706394
ENSMUSG00000023391.9_71374662_71376683_1	chr2	-	1148	3	FSM	ENSMUSG00000023391.9	ENSMUST00000024159.8	2473	3	415	910	415	-910	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGCCAAGCCTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	71376683	71374661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_71375269_71375727_71375913_71376327
ENSMUSG00000023391.9_71375024_71377098_1	chr2	-	1201	3	FSM	ENSMUSG00000023391.9	ENSMUST00000024159.8	2473	3	0	1272	0	-1272	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTACCCGTGGTACCACC	NA	NA	NA	NA	NA	NA	NA	NA	71377098	71375023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_71375269_71375727_71375913_71376327
ENSMUSG00000023411.13_56061170_56063915_1	chr14	+	673	3	ISM	ENSMUSG00000023411.13	ENST00000554591.5	2845	11	21	7333	21	-7166	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAAACTTGGGGGGACG	NA	NA	NA	NA	NA	NA	NA	NA	56061169	56063915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56061414_56062465_56062594_56063614
ENSMUSG00000023411.13_56061227_56063963_1	chr14	+	664	3	ISM	ENSMUSG00000023411.13	ENST00000554591.5	2845	11	78	7285	78	-7118	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTGGGGGCTATCGAG	NA	NA	NA	NA	NA	NA	NA	NA	56061226	56063963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56061414_56062465_56062594_56063614
ENSMUSG00000023411.13_56061312_56064059_1	chr14	+	675	3	ISM	ENSMUSG00000023411.13	ENST00000554591.5	2845	11	163	7189	163	-7022	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGACGCCTCCGACGAGG	NA	NA	NA	NA	NA	NA	NA	NA	56061311	56064059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56061414_56062465_56062594_56063614
ENSMUSG00000023411.13_56062494_56064166_1	chr14	+	652	2	ISM	ENSMUSG00000023411.13	ENST00000553469.5	2418	10	33	6915	0	-6915	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGGCTTCTCCTAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	56062493	56064166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56062594_56063614
ENSMUSG00000023411.13_56062494_56064237_1	chr14	+	723	2	ISM	ENSMUSG00000023411.13	ENST00000553469.5	2418	10	33	6844	0	-6844	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCAGAGGATAGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	56062493	56064237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56062594_56063614
ENSMUSG00000023411.13_56064213_56066161_1	chr14	+	600	2	ISM	ENSMUSG00000023411.13	ENST00000554661.5	2585	9	898	4920	898	-4920	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGAGGGCAGCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	56064212	56066161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56064711_56066059
ENSMUSG00000023411.13_56064495_56068053_1	chr14	+	893	5	ISM	ENSMUSG00000023411.13	ENST00000554661.5	2585	9	1180	3028	1180	-3028	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACCTACTGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	56064494	56068053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912
ENSMUSG00000023411.13_56064666_56069445_1	chr14	+	819	7	ISM	ENSMUSG00000023411.13	ENST00000554661.5	2585	9	1351	1636	1351	-1636	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCCCGACCAGTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	56064665	56069445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404
ENSMUSG00000023411.13_56066820_56069869_1	chr14	+	889	6	ISM	ENSMUSG00000023411.13	ENST00000554661.5	2585	9	3505	1212	-1056	-1212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCAGACGGGGCCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	56066819	56069869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679
ENSMUSG00000023411.13_56066926_56069712_1	chr14	+	626	6	ISM	ENSMUSG00000023411.13	ENST00000554661.5	2585	9	3611	1369	-950	-1369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCGGGGCTTCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	56066925	56069712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679
ENSMUSG00000023411.13_56067351_56071082_1	chr14	+	827	6	ISM	ENSMUSG00000023411.13	ENST00000554661.5	2585	9	4036	-1	-525	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTAGTGGTCCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	56067350	56071082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679_56069941_56071013
ENSMUSG00000023411.13_56068010_56071082_1	chr14	+	557	5	FSM	ENSMUSG00000023411.13	ENST00000557767.5	690	5	134	-1	134	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTAGTGGTCCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	56068009	56071082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_56068054_56069109_56069166_56069404_56069532_56069679_56069941_56071013
ENSMUSG00000023411.13_56068010_56071082_2	chr14	+	552	5	NNC	ENSMUSG00000023411.13	novel	690	5	NA	NA	134	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTAGTGGTCCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	56068009	56071082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_56068054_56069109_56069161_56069404_56069532_56069679_56069941_56071013
ENSMUSG00000023411.13_56068010_56071249_1	chr14	+	724	5	FSM	ENSMUSG00000023411.13	ENST00000557767.5	690	5	134	-168	134	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTAAGGGTGTGGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	56068009	56071249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_56068054_56069109_56069166_56069404_56069532_56069679_56069941_56071013
ENSMUSG00000023411.13_56069403_56071082_1	chr14	+	455	3	NNC	ENSMUSG00000023411.13	novel	690	5	NA	NA	1527	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTAGTGGTCCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	56069402	56071082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_56069532_56069679_56069941_56071017
ENSMUSG00000023411.13_56069787_56071400_1	chr14	+	541	2	ISM	ENSMUSG00000023411.13	ENST00000557767.5	690	5	1911	-319	1911	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGCTCCAGAGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	56069786	56071400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56069941_56071013
ENSMUSG00000023452.20_32893768_32895431_1	chr5	-	1133	2	ISM	ENSMUSG00000023452.20	ENSMUST00000120591.8	2491	9	8225	0	4388	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTAACTTTTTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	32895431	32893767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_32894799_32895329
ENSMUSG00000023452.20_32893913_32895834_1	chr5	-	1150	3	ISM	ENSMUSG00000023452.20	ENSMUST00000120591.8	2491	9	7822	145	3985	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTAGGGACTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	32895834	32893912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_32894799_32895329_32895491_32895731
ENSMUSG00000023452.20_32894110_32896228_1	chr5	-	1100	4	ISM	ENSMUSG00000023452.20	ENSMUST00000120591.8	2491	9	7428	342	3591	-342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATGTGTTATCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	32896228	32894109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125
ENSMUSG00000023452.20_32894186_32896258_1	chr5	-	1054	4	ISM	ENSMUSG00000023452.20	ENSMUST00000120591.8	2491	9	7398	418	3561	-418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCTTCATAACTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	32896258	32894185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125
ENSMUSG00000023452.20_32894325_32896678_1	chr5	-	1119	5	ISM	ENSMUSG00000023452.20	ENSMUST00000120591.8	2491	9	6978	557	3141	-557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCCCTAACTCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	32896678	32894324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480
ENSMUSG00000023452.20_32894574_32931810_1	chr5	-	1156	7	ISM	ENSMUSG00000023452.20	ENSMUST00000061895.16	2183	8	11180	929	11180	-806	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTCGGTTGTGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	32931810	32894573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739
ENSMUSG00000023452.20_32894676_32942970_1	chr5	-	1132	8	FSM	ENSMUSG00000023452.20	ENSMUST00000061895.16	2183	8	20	1031	20	-908	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCACCATCGTGCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	32942970	32894675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
ENSMUSG00000023452.20_32895739_32898055_1	chr5	-	604	4	ISM	ENSMUSG00000023452.20	ENSMUST00000071829.12	1986	6	1764	1971	1764	-1971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCAGGTCTGCCCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	32898055	32895738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_32895879_32896125_32896265_32896480_32896718_32897967
ENSMUSG00000023452.20_32896208_32899679_1	chr5	-	586	4	ISM	ENSMUSG00000023452.20	ENSMUST00000071829.12	1986	6	140	2440	140	-2440	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGGTAAAGGGCGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	32899679	32896207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_32896265_32896480_32896718_32897967_32898134_32899553
ENSMUSG00000023452.20_32896644_32902892_1	chr5	-	586	4	ISM	ENSMUSG00000023452.20	ENSMUST00000120591.8	2491	9	764	2876	764	-2876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGGCTCCGGAGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	32902892	32896643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_32896718_32897967_32898134_32899553_32899820_32902812
ENSMUSG00000023456.17_124787555_124791016_1	chr6	-	1358	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	243	0	243	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAACCTCTTTGTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	124791016	124787554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
ENSMUSG00000023456.17_124787687_124791151_1	chr6	-	1361	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	108	132	108	-132	multi-exon	FALSE	canonical	NA	NA	NA	NA	12356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGAGCTTTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	124791151	124787686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
ENSMUSG00000023456.17_124787748_124791151_1	chr6	-	1294	7	NNC	ENSMUSG00000023456.17	novel	1607	7	NA	NA	108	-193	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGCCAAAGCCCCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	124791151	124787747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_124788351_124788479_124788562_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
ENSMUSG00000023456.17_124787748_124791259_1	chr6	-	1408	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	0	193	0	-193	multi-exon	FALSE	canonical	NA	NA	NA	NA	7259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGCCAAAGCCCCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	124791259	124787747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
ENSMUSG00000023473.14_108726378_108728597_1	chr9	+	395	2	ISM	ENSMUSG00000023473.14	ENSMUST00000024238.11	11547	35	22859	1571	22859	-1571	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATCGCAAGGCAGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	108726377	108728597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108726675_108728499
ENSMUSG00000023484.15_98953062_98955272_1	chr15	+	1168	6	ISM	ENSMUSG00000023484.15	ENST00000257860.9	1451	9	0	1279	0	-1279	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTACCAGGAGCTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	98953061	98955272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_98953645_98953984_98954046_98954221_98954318_98954649_98954818_98954913_98955040_98955138
ENSMUSG00000023484.15_98953382_98956501_1	chr15	+	1084	9	FSM	ENSMUSG00000023484.15	ENSMUST00000024249.5	1757	9	320	353	320	-50	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGGAACAGCACAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	98953381	98956501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_98953645_98953984_98954046_98954221_98954318_98954649_98954818_98954913_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956482
ENSMUSG00000023484.15_98953440_98956551_1	chr15	+	1076	9	FSM	ENSMUSG00000023484.15	ENSMUST00000024249.5	1757	9	378	303	378	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCAGCCAGAGCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	98953439	98956551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_98953645_98953984_98954046_98954221_98954318_98954649_98954818_98954913_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956482
ENSMUSG00000023495.14_106331132_106339451_1	chr9	+	839	10	ISM	ENSMUSG00000023495.14	ENSMUST00000024260.14	2035	13	91	1760	91	-1719	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCAGTTTCGGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	106331131	106339451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387
ENSMUSG00000023495.14_106337202_106341211_2	chr9	+	1647	10	NNC	ENSMUSG00000023495.14	novel	1611	12	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGCAGTAATACTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	106337201	106341211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_106337379_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340526
ENSMUSG00000023495.14_106337202_106341211_3	chr9	+	1680	11	NNC	ENSMUSG00000023495.14	novel	1611	12	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGCAGTAATACTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	106337201	106341211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_106337379_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340526
ENSMUSG00000023495.14_106337202_106341211_4	chr9	+	1674	12	FSM	ENSMUSG00000023495.14	ENST00000471622.5	1611	12	-22	-41	-22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGCAGTAATACTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	106337201	106341211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340526
ENSMUSG00000023495.14_106337202_106341211_5	chr9	+	1658	11	NNC	ENSMUSG00000023495.14	novel	1611	12	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGCAGTAATACTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	106337201	106341211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_106337357_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340526
ENSMUSG00000023495.14_106337289_106339123_1	chr9	+	443	5	NNC	ENSMUSG00000023495.14	novel	1717	11	NA	NA	65	-2047	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGAAGCATCCAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	106337288	106339123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_106337349_106337570_106337629_106337849_106337967_106338191_106338324_106339047
ENSMUSG00000023495.14_106337294_106339123_1	chr9	+	421	5	NNC	ENSMUSG00000023495.14	novel	1717	11	NA	NA	70	-2047	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGAAGCATCCAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	106337293	106339123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_106337357_106337595_106337629_106337849_106337967_106338191_106338324_106339047
ENSMUSG00000023495.14_106337594_106339452_1	chr9	+	469	6	ISM	ENSMUSG00000023495.14	ENST00000428823.6	1717	11	370	1756	370	-1718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCAGTTTCGGCTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	106337593	106339452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106337629_106337849_106337967_106338191_106338324_106339047_106339123_106339267_106339313_106339387
ENSMUSG00000023495.14_106337859_106340383_1	chr9	+	830	9	ISM	ENSMUSG00000023495.14	ENSMUST00000024260.14	2035	13	6818	828	635	-787	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCCACCCCTTTCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	106337858	106340383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ENSMUSG00000023495.14_106338244_106339869_1	chr9	+	480	6	ISM	ENSMUSG00000023495.14	ENST00000428823.6	1717	11	1020	1339	1020	-1301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGGTGAGCATGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	106338243	106339869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106338324_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706
ENSMUSG00000023495.14_106338244_106340488_1	chr9	+	775	8	ISM	ENSMUSG00000023495.14	ENSMUST00000024260.14	2035	13	7203	723	1020	-682	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCCCTTCCTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	106338243	106340488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ENSMUSG00000023495.14_106338568_106340683_1	chr9	+	786	7	ISM	ENSMUSG00000023495.14	ENSMUST00000024260.14	2035	13	7527	528	1344	-487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGCCCAAGGAGACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	106338567	106340683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ENSMUSG00000023495.14_106339558_106340892_1	chr9	+	789	3	ISM	ENSMUSG00000023495.14	ENST00000428823.6	1717	11	2334	316	2334	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCTGCTGTGGGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	106339557	106340892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106339614_106339706_106339877_106340329
ENSMUSG00000023505.14_124806773_124810495_1	chr6	+	1679	6	NNC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	122	-169	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTCATGATCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	124806772	124810495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_124807237_124807465_124807614_124808324_124808446_124809108_124809403_124809528_124809633_124809947
ENSMUSG00000023505.14_124806800_124810495_1	chr6	+	1658	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	149	169	149	-169	multi-exon	FALSE	canonical	NA	NA	NA	NA	2172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTCATGATCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	124806799	124810495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ENSMUSG00000023505.14_124806836_124810518_1	chr6	+	1645	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	185	146	185	-146	multi-exon	FALSE	canonical	NA	NA	NA	NA	2231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTACGCCTCTCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	124806835	124810518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ENSMUSG00000023505.14_124806962_124810664_1	chr6	+	1659	6	NNC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	311	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTTGTCTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	124806961	124810664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_124807237_124807465_124807614_124808324_124808446_124809108_124809403_124809528_124809633_124809947
ENSMUSG00000023505.14_124806997_124810664_1	chr6	+	1630	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	346	0	346	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTTGTCTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	124806996	124810664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ENSMUSG00000023505.14_124807015_124810664_1	chr6	+	1606	6	NNC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	364	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTTGTCTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	124807014	124810664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_124807237_124807465_124807614_124808324_124808446_124809108_124809403_124809528_124809633_124809947
ENSMUSG00000023505.14_124807515_124810104_1	chr6	+	781	5	ISM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	864	560	24	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCTGGAGTCATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	124807514	124810104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ENSMUSG00000023505.14_124807584_124810104_1	chr6	+	706	5	NNC	ENSMUSG00000023505.14	novel	809	5	NA	NA	93	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCTGGAGTCATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	124807583	124810104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809953
ENSMUSG00000023505.14_124807584_124810104_2	chr6	+	608	4	NIC	ENSMUSG00000023505.14	novel	705	4	NA	NA	93	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCTGGAGTCATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	124807583	124810104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_124807614_124808324_124808452_124809108_124809403_124809947
ENSMUSG00000023505.14_124808322_124810104_1	chr6	+	585	3	ISM	ENSMUSG00000023505.14	ENST00000540683.1	705	4	831	0	831	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCTGGAGTCATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	124808321	124810104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124808456_124809108_124809403_124809947
ENSMUSG00000023571.5_156046956_156049493_1	chr4	+	534	4	ISM	ENSMUSG00000023571.5	ENSMUST00000024338.5	1315	8	181	1593	181	-1593	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAACGGCTGGTGGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	156046955	156049493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156047195_156048999_156049117_156049224_156049346_156049436
ENSMUSG00000023571.5_156047060_156050070_1	chr4	+	545	5	ISM	ENSMUSG00000023571.5	ENSMUST00000024338.5	1315	8	285	1016	285	-1016	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGGGATCTGGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	156047059	156050070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156047195_156048999_156049117_156049224_156049346_156049436_156049589_156050050
ENSMUSG00000023571.5_156047135_156050104_1	chr4	+	504	5	ISM	ENSMUSG00000023571.5	ENSMUST00000024338.5	1315	8	360	982	360	-982	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTCACAGCCCCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	156047134	156050104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156047195_156048999_156049117_156049224_156049346_156049436_156049589_156050050
ENSMUSG00000023571.5_156049018_156050413_1	chr4	+	572	5	ISM	ENSMUSG00000023571.5	ENSMUST00000024338.5	1315	8	2243	673	2243	-673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCCCACCACAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	156049017	156050413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156049117_156049224_156049346_156049436_156049589_156050050_156050160_156050322
ENSMUSG00000023571.5_156049267_156050880_1	chr4	+	530	6	ISM	ENSMUSG00000023571.5	ENSMUST00000024338.5	1315	8	2492	206	2492	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCGTGGACAACAGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	156049266	156050880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156049346_156049436_156049589_156050050_156050160_156050322_156050414_156050538_156050618_156050860
ENSMUSG00000023571.5_156049554_156051086_1	chr4	+	540	5	ISM	ENSMUSG00000023571.5	ENSMUST00000024338.5	1315	8	2779	0	2779	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGCACTCTGCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	156049553	156051086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156049589_156050050_156050160_156050322_156050414_156050538_156050618_156050860
ENSMUSG00000023572.17_120838948_120846994_1	chr2	+	1114	11	FSM	ENSMUSG00000023572.17	ENSMUST00000060455.15	1569	11	64	391	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCAATCCCTACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	120838947	120846994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_120839091_120839198_120839259_120839523_120839604_120840307_120840390_120841914_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
ENSMUSG00000023572.17_120842162_120847385_1	chr2	+	1045	6	ISM	ENSMUSG00000023572.17	ENSMUST00000099489.9	1632	10	3233	0	3209	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTCCTCTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	120842161	120847385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
ENSMUSG00000023707.14_124250360_124253376_1	chr5	+	1426	7	FSM	ENSMUSG00000023707.14	ENSMUST00000024470.13	1596	7	0	170	0	-163	multi-exon	TRUE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACTCTTATCAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	124250359	124253376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252450_124252709_124252777
ENSMUSG00000023707.14_124250494_124253539_1	chr5	+	1455	7	FSM	ENSMUSG00000023707.14	ENSMUST00000024470.13	1596	7	134	7	106	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCCCTCTGTTTGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	124250493	124253539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252450_124252709_124252777
ENSMUSG00000023723.18_88095214_88101864_1	chr11	+	958	5	FSM	ENSMUSG00000023723.18	ENSMUST00000118784.8	1404	5	-23	469	0	368	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATCTGAACTCTTTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	88095213	88101864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_88095407_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ENSMUSG00000023723.18_88095214_88101864_2	chr11	+	863	5	FSM	ENSMUSG00000023723.18	ENSMUST00000024486.14	1332	5	0	469	0	368	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATCTGAACTCTTTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	88095213	88101864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_88095312_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ENSMUSG00000023723.18_88100679_88102142_1	chr11	+	872	3	ISM	ENSMUSG00000023723.18	ENSMUST00000118784.8	1404	5	5442	191	5429	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAAATTGTTTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	88100678	88102142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_88100757_88100929_88101057_88101475
ENSMUSG00000023800.16_3464364_3487544_1	chr17	+	1973	5	ISM	ENSMUSG00000023800.16	ENST00000461783.7	5623	25	98	82168	98	-81457	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCCGCATGCGCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	3464363	3487544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3465461_3471547_3471984_3477402_3477576_3479065_3479291_3487502
ENSMUSG00000023800.16_3464405_3487605_1	chr17	+	1993	5	ISM	ENSMUSG00000023800.16	ENST00000461783.7	5623	25	139	82107	139	-81396	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTTGCTGCCACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	3464404	3487605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3465461_3471547_3471984_3477402_3477576_3479065_3479291_3487502
ENSMUSG00000023800.16_3464521_3488926_1	chr17	+	1985	6	ISM	ENSMUSG00000023800.16	ENST00000461783.7	5623	25	255	80786	255	-80075	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGAAAAGAACACTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	3464520	3488926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3465461_3471547_3471984_3477402_3477576_3479065_3479291_3487502_3487689_3488901
ENSMUSG00000023800.16_3464580_3488974_1	chr17	+	1974	6	ISM	ENSMUSG00000023800.16	ENST00000461783.7	5623	25	314	80738	314	-80027	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATTTTCTTCATTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	3464579	3488974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3465461_3471547_3471984_3477402_3477576_3479065_3479291_3487502_3487689_3488901
ENSMUSG00000023800.16_3464688_3498721_1	chr17	+	2009	7	ISM	ENSMUSG00000023800.16	ENST00000461783.7	5623	25	422	70991	422	-70280	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATGTCCACTTCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	3464687	3498721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3465461_3471547_3471984_3477402_3477576_3479065_3479291_3487502_3487689_3488901_3489049_3498652
ENSMUSG00000023800.16_3464820_3500524_1	chr17	+	1985	8	ISM	ENSMUSG00000023800.16	ENST00000461783.7	5623	25	554	69188	554	-68477	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTATGGTCTTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	3464819	3500524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3465461_3471547_3471984_3477402_3477576_3479065_3479291_3487502_3487689_3488901_3489049_3498652_3498812_3500506
ENSMUSG00000023800.16_3465156_3504431_1	chr17	+	1981	11	NNC	ENSMUSG00000023800.16	novel	5623	25	NA	NA	890	-64570	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGCTTTGTTTTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	3465155	3504431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_3465461_3471547_3471984_3477402_3477576_3479065_3479291_3487502_3487689_3488901_3489049_3498652_3498812_3500506_3500616_3501053_3501133_3503594_3503688_3504362
ENSMUSG00000023800.16_3465247_3504524_1	chr17	+	1983	11	NNC	ENSMUSG00000023800.16	novel	5623	25	NA	NA	981	-64477	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCTGTTCTCCAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	3465246	3504524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_3465461_3471547_3471984_3477402_3477576_3479065_3479291_3487502_3487689_3488901_3489049_3498652_3498812_3500506_3500616_3501053_3501133_3503594_3503688_3504362
ENSMUSG00000023800.16_3465379_3527507_1	chr17	+	2011	12	NNC	ENSMUSG00000023800.16	novel	5623	25	NA	NA	1113	-41494	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGATCAAGTGCCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	3465378	3527507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_3465461_3471547_3471984_3477402_3477576_3479065_3479291_3487502_3487689_3488901_3489049_3498652_3498812_3500506_3500616_3501053_3501133_3503594_3503688_3504362_3504627_3527449
ENSMUSG00000023800.16_3471597_3553231_1	chr17	+	2002	12	NNC	ENSMUSG00000023800.16	novel	5623	25	NA	NA	7331	-15770	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGACCCACCTCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	3471596	3553231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_3471984_3477402_3477576_3479065_3479291_3487502_3487689_3488901_3489049_3498652_3498812_3500506_3500616_3501053_3501133_3503594_3503688_3504362_3504627_3527449_3527554_3553155
ENSMUSG00000023800.16_3471661_3553275_1	chr17	+	1982	12	NNC	ENSMUSG00000023800.16	novel	5623	25	NA	NA	7395	-15726	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATCGCCTCCGGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	3471660	3553275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_3471984_3477402_3477576_3479065_3479291_3487502_3487689_3488901_3489049_3498652_3498812_3500506_3500616_3501053_3501133_3503594_3503688_3504362_3504627_3527449_3527554_3553155
ENSMUSG00000023800.16_3471775_3557066_1	chr17	+	2022	14	NNC	ENSMUSG00000023800.16	novel	5623	25	NA	NA	7509	-11935	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGATGCTGGAGTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	3471774	3557066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_3471984_3477402_3477576_3479065_3479291_3487502_3487689_3488901_3489049_3498652_3498812_3500506_3500616_3501053_3501133_3503594_3503688_3504362_3504627_3527449_3527554_3553155_3553336_3555982_3556052_3557041
ENSMUSG00000023800.16_3479146_3561356_1	chr17	+	1975	15	NNC	ENSMUSG00000023800.16	novel	5623	25	NA	NA	-8355	-7645	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCCAGTCACATCAATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	3479145	3561356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_3479291_3487502_3487689_3488901_3489049_3498652_3498812_3500506_3500616_3501053_3501133_3503594_3503688_3504362_3504627_3527449_3527554_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331
ENSMUSG00000023800.16_3487647_3564983_1	chr17	+	1986	17	NNC	ENSMUSG00000023800.16	novel	3054	20	NA	NA	146	-4018	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	876	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCCATTTAAATTCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	3487646	3564983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_3487689_3488901_3489049_3498652_3498812_3500506_3500616_3501053_3501133_3503594_3503688_3504362_3504627_3527449_3527554_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945
ENSMUSG00000023800.16_3488988_3563145_1	chr17	+	1744	15	ISM	ENSMUSG00000023800.16	ENST00000528391.6	3151	21	1487	5856	1487	-5856	internal_fragment	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGATGCACTCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3488987	3563145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3489049_3489975_3490048_3498652_3498812_3500506_3500612_3501053_3501133_3503594_3503688_3504362_3504627_3527449_3527554_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121
ENSMUSG00000023800.16_3498725_3566930_1	chr17	+	1970	17	ISM	ENSMUSG00000023800.16	ENST00000456877.6	3054	20	11224	2071	11224	-2071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACGTGTAAGGACCGGC	NA	NA	NA	NA	NA	NA	NA	NA	3498724	3566930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3498812_3500506_3500612_3501053_3501133_3503594_3503688_3504362_3504627_3527449_3527554_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837
ENSMUSG00000023800.16_3500541_3568466_1	chr17	+	1991	17	ISM	ENSMUSG00000023800.16	ENST00000456877.6	3054	20	13040	535	13040	-535	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAGATGAGTGCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	3500540	3568466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3500612_3501053_3501133_3503594_3503688_3504362_3504627_3527449_3527554_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568386
ENSMUSG00000023800.16_3504361_3568534_1	chr17	+	1843	14	ISM	ENSMUSG00000023800.16	ENST00000528391.6	3151	21	16860	467	16860	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTCTAAGAGCACCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	3504360	3568534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3504627_3527449_3527554_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568361
ENSMUSG00000023800.16_3504398_3568728_1	chr17	+	1975	14	ISM	ENSMUSG00000023800.16	ENST00000456877.6	3054	20	16897	273	16897	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTTGGGCAGCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	3504397	3568728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3504627_3527449_3527554_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568386
ENSMUSG00000023800.16_3504521_3568534_1	chr17	+	1683	14	ISM	ENSMUSG00000023800.16	ENST00000528391.6	3151	21	17020	467	17020	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTCTAAGAGCACCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	3504520	3568534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3504627_3527449_3527554_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568361
ENSMUSG00000023800.16_3504521_3568813_1	chr17	+	1937	14	ISM	ENSMUSG00000023800.16	ENST00000456877.6	3054	20	17020	188	17020	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGCACCAAGAGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	3504520	3568813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3504627_3527449_3527554_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568386
ENSMUSG00000023800.16_3504521_3568884_1	chr17	+	2008	14	ISM	ENSMUSG00000023800.16	ENST00000456877.6	3054	20	17020	117	17020	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAACTGCCAGCATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	3504520	3568884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3504627_3527449_3527554_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568386
ENSMUSG00000023800.16_3527449_3568676_1	chr17	+	1720	13	ISM	ENSMUSG00000023800.16	ENST00000528391.6	3151	21	39948	325	-4986	-325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTGAGATTCAGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	3527448	3568676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3527554_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568361
ENSMUSG00000023800.16_3527449_3569001_1	chr17	+	2020	13	ISM	ENSMUSG00000023800.16	ENST00000456877.6	3054	20	39948	0	-4986	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	740	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTGTAGTGTGCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	3527448	3569001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3527554_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568386
ENSMUSG00000023800.16_3527494_3568739_1	chr17	+	1738	13	ISM	ENSMUSG00000023800.16	ENST00000528391.6	3151	21	39993	262	-4941	-262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGCCTCTCACAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	3527493	3568739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3527554_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568361
ENSMUSG00000023800.16_3532590_3553336_1	chr17	+	482	2	ISM	ENSMUSG00000023800.16	ENST00000275246.11	2371	13	155	15665	155	-15665	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGGAAGTGGTGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	3532589	3553336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3532891_3553155
ENSMUSG00000023800.16_3532773_3557129_1	chr17	+	455	4	ISM	ENSMUSG00000023800.16	ENST00000275246.11	2371	13	338	11872	338	-11872	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTTTAGTGTCCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	3532772	3557129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3532891_3553155_3553336_3555982_3556052_3557041
ENSMUSG00000023800.16_3555981_3569261_1	chr17	+	1997	11	ISM	ENSMUSG00000023800.16	ENST00000275246.11	2371	13	23546	-260	23546	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTTTTTCTTGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	3555980	3569261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568386
ENSMUSG00000023800.16_3557042_3569477_1	chr17	+	1973	11	ISM	ENSMUSG00000023800.16	ENST00000461783.7	5623	25	92776	235	24607	-195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCCCCTACCCCCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	3557041	3569477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568386_3569261_3569429
ENSMUSG00000023800.16_3557093_3569532_1	chr17	+	1977	11	ISM	ENSMUSG00000023800.16	ENST00000461783.7	5623	25	92827	180	24658	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAAGCACTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	3557092	3569532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568386_3569261_3569429
ENSMUSG00000023800.16_3557141_3569670_1	chr17	+	2067	11	ISM	ENSMUSG00000023800.16	ENST00000461783.7	5623	25	92875	42	24706	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTACTTGGTATTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	3557140	3569670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568386_3569261_3569429
ENSMUSG00000023806.11_7172832_7215680_1	chr17	-	835	5	NNC	ENSMUSG00000023806.11	novel	821	5	NA	NA	-22	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTACTCTGAGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	7215680	7172831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_7172911_7175430_7175594_7177506_7177711_7209070_7209156_7215376
ENSMUSG00000023806.11_7172832_7215680_2	chr17	-	843	5	FSM	ENSMUSG00000023806.11	ENST00000449822.5	821	5	-22	0	-22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTACTCTGAGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	7215680	7172831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_7172919_7175430_7175594_7177506_7177711_7209070_7209156_7215376
ENSMUSG00000023827.9_12338171_12437966_1	chr17	+	1349	9	FSM	ENSMUSG00000023827.9	ENSMUST00000024594.9	1915	9	0	566	0	-566	multi-exon	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGAAAGTCACCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	12338170	12437966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_12338303_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ENSMUSG00000023827.9_12338171_12438140_1	chr17	+	1523	9	FSM	ENSMUSG00000023827.9	ENSMUST00000024594.9	1915	9	0	392	0	-392	multi-exon	FALSE	canonical	NA	NA	NA	NA	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTTCCCCTCCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	12338170	12438140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_12338303_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ENSMUSG00000023827.9_12370659_12438140_1	chr17	+	1141	7	ISM	ENSMUSG00000023827.9	ENST00000366911.9	1529	8	82	397	82	-392	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTTCCCCTCCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	12370658	12438140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_12370837_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ENSMUSG00000023827.9_12370659_12438140_2	chr17	+	1311	8	ISM	ENSMUSG00000023827.9	ENST00000320285.9	1821	10	32480	397	82	-392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTTCCCCTCCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	12370658	12438140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ENSMUSG00000023827.9_12370659_12438212_1	chr17	+	1213	7	ISM	ENSMUSG00000023827.9	ENST00000366911.9	1529	8	82	325	82	-320	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGTGTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	12370658	12438212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_12370837_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ENSMUSG00000023827.9_12370659_12438320_1	chr17	+	1230	8	FSM	ENSMUSG00000023827.9	ENST00000366911.9	1529	8	82	217	82	-212	multi-exon	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTGCACTTGTGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	12370658	12438320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_12370837_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871_12438212_12438302
ENSMUSG00000023827.9_12370780_12438357_1	chr17	+	1146	8	FSM	ENSMUSG00000023827.9	ENST00000366911.9	1529	8	203	180	203	-175	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGCAAGGAAGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	12370779	12438357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_12370837_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871_12438212_12438302
ENSMUSG00000023827.9_12370815_12438532_1	chr17	+	1286	8	FSM	ENSMUSG00000023827.9	ENST00000366911.9	1529	8	238	5	238	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCAAGTGTTTACACAA	NA	NA	NA	NA	NA	NA	NA	NA	12370814	12438532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_12370837_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871_12438212_12438302
ENSMUSG00000023827.9_12417639_12438384_1	chr17	+	1377	7	ISM	ENSMUSG00000023827.9	ENST00000320285.9	1821	10	79460	153	47062	-148	intron_retention	FALSE	canonical	NA	NA	NA	NA	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAAGGGAAGGTGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	12417638	12438384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ENSMUSG00000023827.9_12417740_12438376_1	chr17	+	1177	8	ISM	ENSMUSG00000023827.9	ENST00000320285.9	1821	10	79561	161	47163	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGGGTGGAAGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	12417739	12438376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871_12438212_12438302
ENSMUSG00000023827.9_12429097_12438537_1	chr17	+	1270	7	ISM	ENSMUSG00000023827.9	ENST00000366911.9	1529	8	58520	0	58520	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTGTTTACACAAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	12429096	12438537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871_12438212_12438302
ENSMUSG00000023827.9_12429097_12438537_2	chr17	+	1361	6	ISM	ENSMUSG00000023827.9	ENST00000366911.9	1529	8	58520	0	58520	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTGTTTACACAAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	12429096	12438537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ENSMUSG00000023829.10_12867937_12885553_1	chr17	-	792	7	ISM	ENSMUSG00000023829.10	ENST00000457470.6	1433	9	8993	10	8993	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTCCAAACAGGCAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	12885553	12867936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_12867972_12875824_12875934_12878432_12878648_12881423_12881531_12881650_12881766_12883276_12883446_12885511
ENSMUSG00000023829.10_12867938_12894369_1	chr17	-	1348	10	FSM	ENSMUSG00000023829.10	ENST00000324965.8	1525	10	177	0	177	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGTCCAAACAGGCAAATC	NA	NA	NA	NA	NA	NA	NA	NA	12894369	12867937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_12867972_12869755_12869859_12875824_12875934_12878432_12878648_12881423_12881531_12881650_12881766_12883276_12883446_12885511_12885667_12886113_12886218_12894132
ENSMUSG00000023829.10_12875824_12894583_1	chr17	-	1426	8	ISM	ENSMUSG00000023829.10	ENST00000324965.8	1525	10	-37	7886	-37	-7886	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGCCACAAATGGGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	12894583	12875823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_12875934_12878432_12878648_12881423_12881531_12881650_12881766_12883276_12883446_12885511_12885667_12886113_12886218_12894132
ENSMUSG00000023832.15_13161925_13163397_1	chr17	-	1106	2	ISM	ENSMUSG00000023832.15	ENSMUST00000233792.2	1931	8	16210	0	15861	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTTGTCAGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	13163397	13161924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_13162920_13163286
ENSMUSG00000023832.15_13162074_13165302_1	chr17	-	1112	3	ISM	ENSMUSG00000023832.15	ENSMUST00000159697.2	1800	8	13956	-256	13956	-149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGGTGGGCAGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	13165302	13162073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_13162920_13163286_13163398_13165147
ENSMUSG00000023832.15_13162185_13165302_1	chr17	-	1001	3	ISM	ENSMUSG00000023832.15	ENSMUST00000159697.2	1800	8	13956	-145	13956	145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGTAGTGAAAGTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	13165302	13162184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_13162920_13163286_13163398_13165147
ENSMUSG00000023832.15_13162330_13166366_1	chr17	-	979	4	ISM	ENSMUSG00000023832.15	ENSMUST00000159697.2	1800	8	12892	0	12892	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGCAGGGCCCCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	13166366	13162329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243
ENSMUSG00000023832.15_13162498_13171190_1	chr17	-	1007	6	ISM	ENSMUSG00000023832.15	ENSMUST00000159697.2	1800	8	8068	168	8068	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAATTTTCTCTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	13171190	13162497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138
ENSMUSG00000023832.15_13162810_13179016_1	chr17	-	1078	8	FSM	ENSMUSG00000023832.15	ENSMUST00000159697.2	1800	8	242	480	242	-480	multi-exon	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCAGCCCTGTGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	13179016	13162809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881
ENSMUSG00000023832.15_13163290_13179607_1	chr17	-	1077	8	ISM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	27	1513	0	-960	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTAACCAACATGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	13179607	13163289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
ENSMUSG00000023861.18_8502628_8516393_1	chr17	+	820	4	FSM	ENSMUSG00000023861.18	ENST00000621630.1	833	4	-85	98	0	67	multi-exon	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTCTACACATAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	8502627	8516393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_8502794_8515366_8515464_8515655_8515789_8515969
ENSMUSG00000023861.18_8502628_8516393_2	chr17	+	814	4	NNC	ENSMUSG00000023861.18	novel	920	5	NA	NA	0	67	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTCTACACATAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	8502627	8516393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_8502794_8515366_8515464_8515655_8515789_8515975
ENSMUSG00000023861.18_8502628_8516494_1	chr17	+	921	4	FSM	ENSMUSG00000023861.18	ENST00000621630.1	833	4	-85	-3	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGACTATATATC	NA	NA	NA	NA	NA	NA	NA	NA	8502627	8516494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_8502794_8515366_8515464_8515655_8515789_8515969
ENSMUSG00000023861.18_8502628_8516494_2	chr17	+	927	4	NNC	ENSMUSG00000023861.18	novel	920	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGACTATATATC	NA	NA	NA	NA	NA	NA	NA	NA	8502627	8516494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_8502800_8515366_8515464_8515655_8515789_8515969
ENSMUSG00000023883.14_15165271_15166645_1	chr17	-	361	2	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	14890	0	14890	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGATGACCTTAAACATCA	NA	NA	NA	NA	NA	NA	NA	NA	15166645	15165270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_15165447_15166460
ENSMUSG00000023883.14_15170922_15175118_1	chr17	-	385	4	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	6417	5651	6417	-5651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTTCCACGGAAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	15175118	15170921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053
ENSMUSG00000023883.14_15172991_15175355_1	chr17	-	366	4	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	6180	7720	6180	-7720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGAGCCGCCCCTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	15175355	15172990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_15173036_15174276_15174387_15175053_15175204_15175294
ENSMUSG00000023883.14_15174348_15176304_1	chr17	-	382	4	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	5231	9077	5231	-9077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACCGAACGAAGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	15176304	15174347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_15174387_15175053_15175204_15175294_15175429_15176245
ENSMUSG00000023883.14_15175102_15177026_1	chr17	-	351	4	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	4509	9831	4509	-9831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGGAGCGCATGGAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	15177026	15175101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_15175204_15175294_15175429_15176245_15176330_15176995
ENSMUSG00000023885.10_14885762_14887441_1	chr17	-	267	2	ISM	ENSMUSG00000023885.10	ENST00000617924.6	4066	21	23106	-3	23106	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGAATCTCTCTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	14887441	14885761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_14885885_14887297
ENSMUSG00000023885.10_14885762_14906063_1	chr17	-	3284	19	ISM	ENSMUSG00000023885.10	ENST00000617924.6	4066	21	4484	-3	4484	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGAATCTCTCTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	14906063	14885761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_14885885_14887297_14887783_14888986_14889127_14890233_14890332_14890855_14891128_14891534_14891763_14893405_14893641_14894307_14894427_14896468_14896629_14897247_14897356_14898947_14899167_14899943_14900097_14900172_14900301_14900554_14900729_14901500_14901678_14901926_14902098_14903550_14903648_14904333_14904475_14906007
ENSMUSG00000023885.10_14887576_14910070_1	chr17	-	3191	20	ISM	ENSMUSG00000023885.10	ENST00000676498.1	4061	21	477	1806	477	-1806	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2781	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCTGCTGGAAAACATT	NA	NA	NA	NA	NA	NA	NA	NA	14910070	14887575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_14887783_14888986_14889127_14890233_14890332_14890855_14891128_14891534_14891763_14893405_14893641_14894307_14894427_14896468_14896629_14897247_14897356_14898947_14899167_14899943_14900097_14900172_14900301_14900554_14900729_14901500_14901678_14901926_14902098_14903550_14903648_14904333_14904475_14906007_14906205_14908067_14908153_14909988
ENSMUSG00000023885.10_14887642_14910139_1	chr17	-	3194	20	ISM	ENSMUSG00000023885.10	ENST00000676498.1	4061	21	408	1872	408	-1872	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATCAGCACCAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	14910139	14887641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_14887783_14888986_14889127_14890233_14890332_14890855_14891128_14891534_14891763_14893405_14893641_14894307_14894427_14896468_14896629_14897247_14897356_14898947_14899167_14899943_14900097_14900172_14900301_14900554_14900729_14901500_14901678_14901926_14902098_14903550_14903648_14904333_14904475_14906007_14906205_14908067_14908153_14909988
ENSMUSG00000023885.10_14887698_14910196_1	chr17	-	3195	20	ISM	ENSMUSG00000023885.10	ENST00000676498.1	4061	21	351	1928	351	-1928	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2912	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTCATTTGGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	14910196	14887697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_14887783_14888986_14889127_14890233_14890332_14890855_14891128_14891534_14891763_14893405_14893641_14894307_14894427_14896468_14896629_14897247_14897356_14898947_14899167_14899943_14900097_14900172_14900301_14900554_14900729_14901500_14901678_14901926_14902098_14903550_14903648_14904333_14904475_14906007_14906205_14908067_14908153_14909988
ENSMUSG00000023885.10_14889017_14910330_1	chr17	-	3214	19	ISM	ENSMUSG00000023885.10	ENST00000676498.1	4061	21	217	3247	217	-3247	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2828	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTCGGACCTCAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	14910330	14889016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_14889127_14890233_14890332_14890855_14891128_14891534_14891763_14893405_14893641_14894307_14894427_14896468_14896629_14897247_14897356_14898947_14899167_14899943_14900097_14900172_14900301_14900554_14900729_14901500_14901678_14901926_14902098_14903550_14903648_14904333_14904475_14906007_14906205_14908067_14908153_14909988
ENSMUSG00000023885.10_14901523_14902021_1	chr17	-	268	2	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	8526	15753	8526	-15753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCGTGATCCGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	14902021	14901522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_14901678_14901908
ENSMUSG00000023885.10_14906146_14910107_1	chr17	-	263	3	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	440	20376	440	-20376	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATCTCGTGGTCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	14910107	14906145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_14906205_14908067_14908153_14909988
ENSMUSG00000023886.11_14499980_14557989_1	chr17	+	427	4	ISM	ENSMUSG00000023886.11	ENSMUST00000233344.2	2817	13	181	67046	159	11599	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTGTGGCCCACAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	14499979	14557989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_14500062_14545796_14545969_14556808_14556916_14557923
ENSMUSG00000023886.11_14545880_14624339_1	chr17	+	1775	12	ISM	ENSMUSG00000023886.11	ENSMUST00000233344.2	2817	13	46081	696	46059	-696	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAATGGACAAGCAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	14545879	14624339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_14545969_14556808_14556916_14557923_14558024_14564588_14564637_14567435_14567520_14568965_14569041_14589169_14589357_14595698_14595782_14617782_14617886_14619632_14619908_14621803_14621845_14623756
ENSMUSG00000023886.11_14545911_14569029_1	chr17	+	428	6	ISM	ENSMUSG00000023886.11	ENSMUST00000024660.9	2832	13	46143	56023	46090	22639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTCAGGTAAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	14545910	14569029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_14545969_14556808_14556916_14557923_14558024_14564588_14564637_14567468_14567520_14568965
ENSMUSG00000023886.11_14556854_14589249_1	chr17	+	416	6	ISM	ENSMUSG00000023886.11	ENSMUST00000024660.9	2832	13	57086	35803	57033	-35786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACATGGTGGTCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	14556853	14589249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_14556916_14557923_14558024_14564588_14564637_14567468_14567520_14568965_14569041_14589169
ENSMUSG00000023886.11_14557921_14589356_1	chr17	+	464	5	ISM	ENSMUSG00000023886.11	ENSMUST00000024660.9	2832	13	58153	35696	58100	-35679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAACTGCATCCCCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	14557920	14589356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_14558024_14564588_14564637_14567468_14567520_14568965_14569041_14589169
ENSMUSG00000023886.11_14567448_14624703_1	chr17	+	1783	8	ISM	ENSMUSG00000023886.11	ENSMUST00000233344.2	2817	13	67649	332	67627	-332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTCACTTTCTGACCTA	NA	NA	NA	NA	NA	NA	NA	NA	14567447	14624703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_14567520_14568965_14569041_14589169_14589357_14595698_14595782_14617782_14617886_14619632_14619908_14621803_14621845_14623756
ENSMUSG00000023892.9_21672696_21685426_1	chr17	+	2106	4	ISM	ENSMUSG00000023892.9	ENSMUST00000039577.8	2574	5	2060	423	2060	-423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAGAAACTTCATACTGG	NA	NA	NA	NA	NA	NA	NA	NA	21672695	21685426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_21672790_21676558_21676651_21681922_21682050_21683633
ENSMUSG00000023892.9_21672696_21685539_1	chr17	+	2219	4	ISM	ENSMUSG00000023892.9	ENSMUST00000039577.8	2574	5	2060	310	2060	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGATGTGCCGAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	21672695	21685539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_21672790_21676558_21676651_21681922_21682050_21683633
ENSMUSG00000023892.9_21681920_21685658_1	chr17	+	2155	2	ISM	ENSMUSG00000023892.9	ENSMUST00000039577.8	2574	5	11284	191	11284	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGACTCAAATCTTAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	21681919	21685658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_21682050_21683633
ENSMUSG00000023904.11_23892762_23894201_1	chr17	+	766	3	FSM	ENSMUSG00000023904.11	ENSMUST00000024697.5	946	3	180	0	161	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCAGCAGCCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	23892761	23894201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_23893043_23893508_23893650_23893857
ENSMUSG00000023905.16_23894966_23895597_1	chr17	-	295	3	ISM	ENSMUSG00000023905.16	ENSMUST00000233428.2	635	5	797	169	797	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCACCCGCGCTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	23895597	23894965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23895021_23895112_23895248_23895492
ENSMUSG00000023905.16_23895113_23896394_1	chr17	-	334	3	ISM	ENSMUSG00000023905.16	ENSMUST00000024698.10	984	4	48	694	0	-316	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGAGCTCTCCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	23896394	23895112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23895248_23895492_23895598_23896300
ENSMUSG00000023908.9_23945479_23954581_1	chr17	+	1444	6	ISM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	169	1123	169	-1123	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCAGTTGGCTGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	23945478	23954581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536
ENSMUSG00000023908.9_23945479_23954623_1	chr17	+	1486	6	ISM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	169	1081	169	-1081	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTCTCCACCTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	23945478	23954623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536
ENSMUSG00000023908.9_23945589_23954678_1	chr17	+	1431	6	ISM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	279	1026	279	-1026	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGACAGCATAGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	23945588	23954678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536
ENSMUSG00000023908.9_23951308_23955375_1	chr17	+	1501	6	ISM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	5998	329	5998	-329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCAAGCCCGGGGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	23951307	23955375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297
ENSMUSG00000023908.9_23951478_23955701_1	chr17	+	1564	7	ISM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	6168	3	6168	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCATAGCTCTTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	23951477	23955701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ENSMUSG00000023908.9_23951552_23955701_1	chr17	+	1490	7	ISM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	6242	3	6242	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCATAGCTCTTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	23951551	23955701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ENSMUSG00000023908.9_23951624_23955704_1	chr17	+	1421	7	ISM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	6314	0	6314	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATAGCTCTTCTTGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	23951623	23955704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ENSMUSG00000023909.5_23956363_23957188_1	chr17	-	686	2	ISM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	2184	1203	2184	-1203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCCAGCTTCCACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	23957188	23956362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23956974_23957113
ENSMUSG00000023909.5_23956435_23957254_1	chr17	-	680	2	ISM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	2118	1275	2118	-1275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGACTTCCTAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	23957254	23956434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23956974_23957113
ENSMUSG00000023909.5_23956483_23957315_1	chr17	-	693	2	ISM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	2057	1323	2057	-1323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTCCTACTGGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	23957315	23956482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23956974_23957113
ENSMUSG00000023909.5_23956634_23958966_1	chr17	-	695	3	FSM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	406	1474	406	-1474	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGCTGAGTGTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	23958966	23956633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_23956974_23957113_23957336_23958833
ENSMUSG00000023909.5_23956843_23959170_1	chr17	-	690	3	FSM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	202	1683	202	-1683	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGAGCCTTTGGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	23959170	23956842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_23956974_23957113_23957336_23958833
ENSMUSG00000023913.18_43879160_43915539_1	chr17	+	1418	9	ISM	ENSMUSG00000023913.18	ENSMUST00000024706.12	2097	12	0	7553	0	-7553	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAGAGAATAAGACAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	43879159	43915539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_43879678_43899454_43899595_43905179_43905302_43905669_43905815_43907793_43907888_43909964_43910034_43911385_43911510_43913718_43913833_43915447
ENSMUSG00000023913.18_43879366_43922181_1	chr17	+	1405	11	ISM	ENSMUSG00000023913.18	ENSMUST00000024706.12	2097	12	206	911	206	-911	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGACTTTACTTTTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	43879365	43922181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_43879678_43899454_43899595_43905179_43905302_43905669_43905815_43907793_43907888_43909964_43910034_43911385_43911510_43913718_43913833_43915447_43915540_43918125_43918297_43922159
ENSMUSG00000023913.18_43879526_43922775_1	chr17	+	1414	12	FSM	ENSMUSG00000023913.18	ENSMUST00000024706.12	2097	12	366	317	366	-317	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATGATGAGAACCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	43879525	43922775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_43879678_43899454_43899595_43905179_43905302_43905669_43905815_43907793_43907888_43909964_43910034_43911385_43911510_43913718_43913833_43915447_43915540_43918125_43918297_43922159_43922309_43922733
ENSMUSG00000023913.18_43905176_43923092_1	chr17	+	1443	10	ISM	ENSMUSG00000023913.18	ENSMUST00000024706.12	2097	12	26016	0	26016	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTGTCTAAATCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	43905175	43923092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_43905302_43905669_43905815_43907793_43907888_43909964_43910034_43911385_43911510_43913718_43913833_43915447_43915540_43918125_43918297_43922159_43922309_43922733
ENSMUSG00000023918.13_42974270_42978415_1	chr17	-	1123	3	ISM	ENSMUSG00000023918.13	ENST00000283303.3	2140	7	24636	0	24636	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTCCCTTCTAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	42978415	42974269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_42974330_42974769_42974812_42977394
ENSMUSG00000023918.13_42974315_42978482_1	chr17	-	1145	3	ISM	ENSMUSG00000023918.13	ENST00000283303.3	2140	7	24569	45	24569	-45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGAGGGTATCTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	42978482	42974314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_42974330_42974769_42974812_42977394
ENSMUSG00000023918.13_42977728_42980586_1	chr17	-	1117	2	ISM	ENSMUSG00000023918.13	ENST00000283303.3	2140	7	22465	3458	22465	-3458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTCACAGAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	42980586	42977727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_42978778_42980519
ENSMUSG00000023918.13_42977775_42980641_1	chr17	-	1125	2	ISM	ENSMUSG00000023918.13	ENST00000283303.3	2140	7	22410	3505	22410	-3505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGCCATTGGCTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	42980641	42977774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_42978778_42980519
ENSMUSG00000023918.13_42977817_42980703_1	chr17	-	1145	2	ISM	ENSMUSG00000023918.13	ENST00000283303.3	2140	7	22348	3547	22348	-3547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTCCGCAGGATGATG	NA	NA	NA	NA	NA	NA	NA	NA	42980703	42977816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_42978778_42980519
ENSMUSG00000023918.13_42977932_42983420_1	chr17	-	1134	3	ISM	ENSMUSG00000023918.13	ENST00000283303.3	2140	7	19631	3662	19631	-3662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGGAGGATCACAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	42983420	42977931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_42978778_42980519_42980717_42983329
ENSMUSG00000023918.13_42978122_42987561_1	chr17	-	1122	4	ISM	ENSMUSG00000023918.13	ENST00000283303.3	2140	7	15490	3852	15490	-3852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACCTTCATTGGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	42987561	42978121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_42978778_42980519_42980717_42983329_42983539_42987501
ENSMUSG00000023918.13_42978252_43002992_1	chr17	-	1122	5	ISM	ENSMUSG00000023918.13	ENST00000283303.3	2140	7	59	3982	59	-3982	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAGCCCATGTACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	43002992	42978251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_42978778_42980519_42980717_42983329_42983539_42987501_42987656_43002956
ENSMUSG00000023919.9_41233942_41240970_1	chr17	-	960	5	ISM	ENSMUSG00000023919.9	ENSMUST00000239430.2	1442	9	4472	-4	4472	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATGTGTGAGTAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	41240970	41233941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904
ENSMUSG00000023919.9_41234136_41243741_1	chr17	-	948	7	ISM	ENSMUSG00000023919.9	ENSMUST00000239430.2	1442	9	1701	190	1701	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTCTTCAAAACAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	41243741	41234135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686
ENSMUSG00000023919.9_41234245_41244081_1	chr17	-	949	8	ISM	ENSMUSG00000023919.9	ENSMUST00000239430.2	1442	9	1361	299	1361	-299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCATTTGGCCTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	41244081	41234244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971
ENSMUSG00000023919.9_41234354_41245303_1	chr17	-	895	9	FSM	ENSMUSG00000023919.9	ENSMUST00000239430.2	1442	9	139	408	139	-408	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCGTGTTCCATATTAAC	NA	NA	NA	NA	NA	NA	NA	NA	41245303	41234353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
ENSMUSG00000023919.9_41234379_41245442_1	chr17	-	1009	9	FSM	ENSMUSG00000023919.9	ENSMUST00000239430.2	1442	9	0	433	0	-433	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGGATTTTGTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	41245442	41234378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
ENSMUSG00000023919.9_41234478_41245442_1	chr17	-	910	9	FSM	ENSMUSG00000023919.9	ENSMUST00000239430.2	1442	9	0	532	0	-532	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTCTTCTGAAGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	41245442	41234477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
ENSMUSG00000023919.9_41238039_41245622_1	chr17	-	853	6	ISM	ENSMUSG00000023919.9	ENSMUST00000239430.2	1442	9	-180	4093	-180	-4093	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGCAGGTATGCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	41245622	41238038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
ENSMUSG00000023919.9_41238081_41245681_1	chr17	-	870	6	ISM	ENSMUSG00000023919.9	ENSMUST00000239430.2	1442	9	-239	4135	-239	-4135	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGGAAAAGGCACAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	41245681	41238080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
ENSMUSG00000023919.9_41238138_41245738_1	chr17	-	870	6	ISM	ENSMUSG00000023919.9	ENSMUST00000087114.5	1942	9	200	4196	200	-4192	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAGTCCCTCCAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	41245738	41238137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
ENSMUSG00000023919.9_41242575_41245938_1	chr17	-	948	4	ISM	ENSMUSG00000023919.9	ENSMUST00000087114.5	1942	9	0	8633	0	-8629	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTTGCAAAGTATGATG	NA	NA	NA	NA	NA	NA	NA	NA	41245938	41242574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_41242668_41243686_41243742_41243971_41244107_41245273
ENSMUSG00000023921.10_41245576_41252282_1	chr17	+	958	4	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	0	20597	0	-20597	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCTATACCATCGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	41245575	41252282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206
ENSMUSG00000023921.10_41247969_41254710_1	chr17	+	924	4	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	2393	18169	2393	-18169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAATTGGAATGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	41247968	41254710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41248354_41249405_41249774_41252206_41252365_41254697
ENSMUSG00000023921.10_41248028_41254779_1	chr17	+	934	4	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	2452	18100	2452	-18100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATAGAAAAAATGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	41248027	41254779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41248354_41249405_41249774_41252206_41252365_41254697
ENSMUSG00000023921.10_41248151_41257927_1	chr17	+	916	5	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	2575	14952	2575	-14952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCCGCACTGCAATCGA	NA	NA	NA	NA	NA	NA	NA	NA	41248150	41257927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912
ENSMUSG00000023921.10_41248205_41257987_1	chr17	+	922	5	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	2629	14892	2629	-14892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAACTCTTTTGATGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	41248204	41257987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912
ENSMUSG00000023921.10_41248272_41258039_1	chr17	+	907	5	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	2696	14840	2696	-14840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTCGGAACACACAGATC	NA	NA	NA	NA	NA	NA	NA	NA	41248271	41258039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912
ENSMUSG00000023921.10_41249581_41263686_1	chr17	+	901	6	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	4005	9193	4005	-9193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGTAAATAAGTATCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	41249580	41263686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669
ENSMUSG00000023921.10_41249711_41266026_1	chr17	+	904	7	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	4135	6853	4135	-6853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCTCAGTGCACTTACC	NA	NA	NA	NA	NA	NA	NA	NA	41249710	41266026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992
ENSMUSG00000023921.10_41252272_41267183_1	chr17	+	944	7	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	6696	5696	6696	-5696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGAGTTTGGAGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	41252271	41267183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097
ENSMUSG00000023921.10_41252349_41267229_1	chr17	+	913	7	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	6773	5650	6773	-5650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTGTGAGCGTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	41252348	41267229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097
ENSMUSG00000023921.10_41254801_41269326_1	chr17	+	900	7	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	9225	3553	9225	-3553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATCTTGGTTTTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	41254800	41269326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220
ENSMUSG00000023921.10_41257936_41269692_1	chr17	+	950	7	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	12360	3187	12360	-3187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAACTCACCGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	41257935	41269692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592
ENSMUSG00000023921.10_41258093_41271525_1	chr17	+	928	8	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	12517	1354	12517	-1354	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCCAAGTGCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	41258092	41271525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ENSMUSG00000023921.10_41262732_41271663_1	chr17	+	911	7	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	17156	1216	17156	-1216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAAATCCGTTTCGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	41262731	41271663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ENSMUSG00000023921.10_41263746_41271784_1	chr17	+	930	6	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	18170	1095	18170	-1095	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGTTCAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	41263745	41271784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ENSMUSG00000023921.10_41266079_41271895_1	chr17	+	915	5	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	20503	984	20503	-984	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAATAATTGAACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	41266078	41271895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ENSMUSG00000023921.10_41267216_41272034_1	chr17	+	906	4	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	21640	845	21640	-845	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGGATTAAAGGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	41267215	41272034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41267230_41269220_41269369_41269592_41269761_41271458
ENSMUSG00000023921.10_41269332_41272178_1	chr17	+	925	3	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	23756	701	23756	-701	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGACATTTATCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	41269331	41272178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41269369_41269592_41269761_41271458
ENSMUSG00000023921.10_41269672_41272291_1	chr17	+	922	2	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	24096	588	24096	-588	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGGACATGGTAGATAGG	NA	NA	NA	NA	NA	NA	NA	NA	41269671	41272291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41269761_41271458
ENSMUSG00000023921.10_41269725_41272341_1	chr17	+	919	2	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	24149	538	24149	-538	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGATATTGTTAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	41269724	41272341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_41269761_41271458
ENSMUSG00000023927.16_52046480_52049879_1	chr17	-	1162	2	ISM	ENSMUSG00000023927.16	ENST00000454909.6	3748	11	83776	794	68068	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAGAGTTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	52049879	52046479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_52047436_52049673
ENSMUSG00000023927.16_52046637_52075077_1	chr17	-	1161	3	ISM	ENSMUSG00000023927.16	ENST00000454909.6	3748	11	58578	951	42870	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTCCTTTTGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	52075077	52046636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_52047436_52049673_52049878_52074919
ENSMUSG00000023927.16_52047016_52089726_1	chr17	-	1080	5	ISM	ENSMUSG00000023927.16	ENST00000454909.6	3748	11	43929	1330	28221	-512	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGCCAACACCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	52089726	52047015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_52047436_52049673_52049878_52074919_52075076_52082233_52082447_52089639
ENSMUSG00000023927.16_52047016_52089789_1	chr17	-	1143	5	ISM	ENSMUSG00000023927.16	ENST00000454909.6	3748	11	43866	1330	28158	-512	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGCCAACACCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	52089789	52047015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_52047436_52049673_52049878_52074919_52075076_52082233_52082447_52089639
ENSMUSG00000023927.16_52047171_52089863_1	chr17	-	1062	5	ISM	ENSMUSG00000023927.16	ENST00000454909.6	3748	11	43792	1485	28084	-667	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCCCGAAGTACACCATC	NA	NA	NA	NA	NA	NA	NA	NA	52089863	52047170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_52047436_52049673_52049878_52074919_52075076_52082233_52082447_52089639
ENSMUSG00000023927.16_52049674_52092673_1	chr17	-	1145	5	ISM	ENSMUSG00000023927.16	ENSMUST00000176669.8	4407	10	25274	3194	25274	-3170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTTTACCTTGGCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	52092673	52049673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556
ENSMUSG00000023927.16_52049820_52110524_1	chr17	-	1060	6	ISM	ENSMUSG00000023927.16	ENSMUST00000176669.8	4407	10	7423	3340	7423	-3316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGAGAACCTGTCGATG	NA	NA	NA	NA	NA	NA	NA	NA	52110524	52049819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458
ENSMUSG00000023927.16_52074952_52111374_1	chr17	-	1061	6	ISM	ENSMUSG00000023927.16	ENSMUST00000176669.8	4407	10	6573	28472	6573	-28448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCAAAGGTTGCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	52111374	52074951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341
ENSMUSG00000023927.16_52089831_52133484_1	chr17	-	1063	7	ISM	ENSMUSG00000023927.16	ENSMUST00000129667.8	2896	11	110	43348	110	-43327	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGTCCTTAAACCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	52133484	52089830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116307_52133461
ENSMUSG00000023927.16_52089881_52133594_1	chr17	-	1123	7	ISM	ENSMUSG00000023927.16	ENSMUST00000129667.8	2896	11	0	43398	0	-43377	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCTCAGTTGCTGAACC	NA	NA	NA	NA	NA	NA	NA	NA	52133594	52089880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116307_52133461
ENSMUSG00000023927.16_52089959_52133595_1	chr17	-	1046	7	ISM	ENSMUSG00000023927.16	ENSMUST00000129667.8	2896	11	-1	43476	-1	-43455	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGACCCCTCTTCCGAACC	NA	NA	NA	NA	NA	NA	NA	NA	52133595	52089958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116307_52133461
ENSMUSG00000023932.10_45702950_45715648_1	chr17	-	623	3	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	29015	140	29015	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTAAATTATCCAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	45715648	45702949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45703231_45703918_45704132_45715519
ENSMUSG00000023932.10_45703078_45718765_1	chr17	-	608	4	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	25898	268	25898	-268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCAAGGCTGAACTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	45718765	45703077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721
ENSMUSG00000023932.10_45703125_45718822_1	chr17	-	618	4	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	25841	315	25841	-315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGTGGATGCTCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	45718822	45703124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721
ENSMUSG00000023932.10_45703168_45718883_1	chr17	-	636	4	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	25780	358	25780	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGCTGATGGAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	45718883	45703167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721
ENSMUSG00000023932.10_45704093_45721746_1	chr17	-	608	5	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	22917	1283	22917	-1283	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAGATGGAAAAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	45721746	45704092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699
ENSMUSG00000023932.10_45715660_45722824_1	chr17	-	618	5	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	21839	12850	21839	-12850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTCCAGTGAAGCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	45722824	45715659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753
ENSMUSG00000023932.10_45718830_45724112_1	chr17	-	609	5	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	20551	16020	20551	-16020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAATAAAAAAGGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	45724112	45718829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047
ENSMUSG00000023932.10_45718896_45724181_1	chr17	-	612	5	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	20482	16086	20482	-16086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGATCAAAAAAGAAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	45724181	45718895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047
ENSMUSG00000023932.10_45721798_45727922_1	chr17	-	620	5	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	16741	18988	16741	-18988	internal_fragment	TRUE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTTCTGCCTGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	45727922	45721797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870
ENSMUSG00000023932.10_45722876_45730607_1	chr17	-	605	5	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	14056	20066	14056	-20066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAACTCCTAAACCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	45730607	45722875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526
ENSMUSG00000023932.10_45724152_45730745_1	chr17	-	598	4	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	13918	21342	13918	-21342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTGGGCTTAATACCCC	NA	NA	NA	NA	NA	NA	NA	NA	45730745	45724151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45724197_45726478_45726668_45727870_45728016_45730526
ENSMUSG00000023932.10_45726599_45736855_1	chr17	-	611	5	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	7808	23789	7808	-23789	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAGTCAGGAATAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	45736855	45726598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777
ENSMUSG00000023932.10_45727939_45737533_1	chr17	-	612	5	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	7130	25129	7130	-25129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCAAACCAGTGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	45737533	45727938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445
ENSMUSG00000023932.10_45727992_45737586_1	chr17	-	612	5	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	7077	25182	7077	-25182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGACAAACAGCATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	45737586	45727991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445
ENSMUSG00000023932.10_45736827_45744663_1	chr17	-	692	4	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	0	34017	0	-34017	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCAGAGACCAAGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	45744663	45736826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45736906_45737445_45737608_45738864_45738969_45744316
ENSMUSG00000023932.10_45736880_45744663_1	chr17	-	639	4	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	0	34070	0	-34070	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAACAACAGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	45744663	45736879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45736906_45737445_45737608_45738864_45738969_45744316
ENSMUSG00000023938.9_45818541_45825549_1	chr17	+	687	5	ISM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	774	6220	774	-6220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCAGGTGCCCCGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	45818540	45825549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417
ENSMUSG00000023938.9_45819451_45825782_1	chr17	+	633	5	ISM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	1684	5987	1684	-5987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGCAGCCTGGTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	45819450	45825782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710
ENSMUSG00000023938.9_45825454_45827523_1	chr17	+	649	6	ISM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	7687	4246	7687	-4246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACCTAGACCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	45825453	45827523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378
ENSMUSG00000023938.9_45827785_45828940_1	chr17	+	631	5	ISM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	10018	2829	10018	-2829	internal_fragment	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGACGTGAGTCACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	45827784	45828940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837
ENSMUSG00000023938.9_45828056_45829541_1	chr17	+	662	6	ISM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	10289	2228	10289	-2228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGAAGCTCACCGGCTATC	NA	NA	NA	NA	NA	NA	NA	NA	45828055	45829541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463
ENSMUSG00000023942.16_45896128_45904560_1	chr17	-	2080	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	7621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	45904560	45896127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45904481
ENSMUSG00000023942.16_45896128_45904566_1	chr17	-	2087	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	45904566	45896127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_45896704_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45904481
ENSMUSG00000023942.16_45896128_45904566_2	chr17	-	2085	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	45904566	45896127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901258_45903104_45903188_45904257_45904359_45904481
ENSMUSG00000023942.16_45896128_45904566_3	chr17	-	2087	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6916	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	45904566	45896127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899308_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45904481
ENSMUSG00000023942.16_45896128_45904566_4	chr17	-	2088	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	6111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	45904566	45896127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903184_45904257_45904359_45904481
ENSMUSG00000023942.16_45897144_45903423_1	chr17	-	1431	11	ISM	ENSMUSG00000023942.16	ENSMUST00000163492.8	2216	12	78	1018	0	-547	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGCGGCGCGCAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	45903423	45897143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104
ENSMUSG00000023943.8_54269097_54269445_1	chr17	-	137	2	ISM	ENSMUSG00000023943.8	ENST00000681802.2	525	4	2343	0	2343	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGGGTAGAGGGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	54269445	54269096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_54269213_54269424
ENSMUSG00000023943.8_54269127_54269517_1	chr17	-	179	2	ISM	ENSMUSG00000023943.8	ENST00000681802.2	525	4	2271	30	2271	-30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	870	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTACCTTCCGCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	54269517	54269126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_54269213_54269424
ENSMUSG00000023943.8_54269172_54269573_1	chr17	-	190	2	ISM	ENSMUSG00000023943.8	ENST00000681802.2	525	4	2215	75	2215	-75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGGATTTTGATGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	54269573	54269171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_54269213_54269424
ENSMUSG00000023943.8_54269505_54271103_1	chr17	-	196	2	ISM	ENSMUSG00000023943.8	ENST00000681802.2	525	4	685	408	685	-408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	963	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAGAACCCAATGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	54271103	54269504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_54269606_54271008
ENSMUSG00000023943.8_54271008_54271735_1	chr17	-	176	2	ISM	ENSMUSG00000023943.8	ENST00000681802.2	525	4	53	1911	53	-1911	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTAGTGTGATCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	54271735	54271007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_54271104_54271655
ENSMUSG00000023944.15_45878701_45882839_1	chr17	-	2411	10	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-74	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	7266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	45882839	45878700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882094_45882334_45882546_45882690
ENSMUSG00000023944.15_45878701_45883481_1	chr17	-	2589	11	FSM	ENSMUSG00000023944.15	ENST00000371554.2	2613	11	23	1	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	45883481	45878700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45883307
ENSMUSG00000023944.15_45878701_45884181_1	chr17	-	2499	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20018	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	45884181	45878700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_45879051_45879154_45879489_45879783_45880048_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ENSMUSG00000023944.15_45878701_45884181_2	chr17	-	2499	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	18115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	45884181	45878700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881721_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ENSMUSG00000023944.15_45878701_45884181_3	chr17	-	2498	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	22149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	45884181	45878700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881189_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ENSMUSG00000023944.15_45879433_45882508_1	chr17	-	1454	8	ISM	ENSMUSG00000023944.15	ENST00000631455.1	1566	9	257	0	257	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGGACAGCCAACATGG	NA	NA	NA	NA	NA	NA	NA	NA	45882508	45879432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45879489_45879783_45880053_45880165_45880342_45880572_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338
ENSMUSG00000023947.9_45866868_45873981_1	chr17	+	1855	7	FSM	ENSMUSG00000023947.9	ENST00000619360.6	1859	7	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCACGAAGAAGGAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	45866867	45873981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_45867241_45869420_45869524_45870133_45870357_45871049_45871139_45871333_45871574_45872927_45873331_45873557
ENSMUSG00000023953.10_46482281_46501702_1	chr17	-	2496	7	ISM	ENSMUSG00000023953.10	ENSMUST00000024749.9	3238	11	11869	0	11869	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCTTGCATACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	46501702	46482280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532
ENSMUSG00000023953.10_46482505_46505300_1	chr17	-	2445	8	ISM	ENSMUSG00000023953.10	ENSMUST00000024749.9	3238	11	8271	224	8271	-224	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACTTACTTATAAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	46505300	46482504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46505127
ENSMUSG00000023953.10_46482815_46510422_1	chr17	-	2417	10	ISM	ENSMUSG00000023953.10	ENSMUST00000024749.9	3238	11	3149	534	3149	-534	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGATGGGCAAGTGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	46510422	46482814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46505127_46505343_46509559_46509695_46510317
ENSMUSG00000023953.10_46482987_46513548_1	chr17	-	2509	11	FSM	ENSMUSG00000023953.10	ENSMUST00000024749.9	3238	11	23	706	23	-706	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAAGCTCACTTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	46513548	46482986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46505127_46505343_46509559_46509695_46510317_46510461_46513322
ENSMUSG00000023959.11_44499773_44548097_1	chr17	+	154	2	ISM	ENSMUSG00000023959.11	ENSMUST00000024755.7	5862	6	302	42962	43	-39025	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCAATGTCACCACCGT	NA	NA	NA	NA	NA	NA	NA	NA	44499772	44548097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_44499849_44548019
ENSMUSG00000023960.14_44391798_44397458_1	chr17	+	2144	3	ISM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	2062	-8	2062	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTTGTTTTGCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	44391797	44397458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_44392402_44393634_44393812_44396095
ENSMUSG00000023961.17_44408890_44413226_1	chr17	-	2379	3	ISM	ENSMUSG00000023961.17	ENSMUST00000143137.2	4445	4	3429	1683	3429	-1683	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGCGTGCTAAGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	44413226	44408889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_44410569_44412201_44412373_44412697
ENSMUSG00000023963.11_43978531_44002613_1	chr17	+	796	6	ISM	ENSMUSG00000023963.11	ENSMUST00000233627.2	2338	11	130	59168	-46	-58573	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAATGCTCCTCCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	43978530	44002613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_43978686_43987721_43987858_43991014_43991190_43993838_43993989_43996076_43996168_44002524
ENSMUSG00000023963.11_43978626_44036478_1	chr17	+	706	7	ISM	ENSMUSG00000023963.11	ENST00000619708.4	1481	11	49	24708	49	-24708	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGCTTGAGAGCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	43978625	44036478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_43978686_43987721_43987858_43993838_43993989_43996076_43996168_44002524_44002630_44012367_44012459_44036405
ENSMUSG00000023963.11_43993835_44042904_1	chr17	+	760	7	ISM	ENSMUSG00000023963.11	ENST00000619708.4	1481	11	15258	18282	15258	-18282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTGTCCCAGCTGAACG	NA	NA	NA	NA	NA	NA	NA	NA	43993834	44042904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_43993989_43996076_43996168_44002524_44002630_44012367_44012459_44036405_44036540_44041862_44041959_44042815
ENSMUSG00000023963.11_43996111_44060853_1	chr17	+	719	8	ISM	ENSMUSG00000023963.11	ENST00000619708.4	1481	11	17534	333	17534	-333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGAGCTTGACTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	43996110	44060853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_43996168_44002524_44002630_44012367_44012459_44036405_44036540_44041862_44041959_44042815_44042905_44057415_44057504_44060794
ENSMUSG00000023963.11_44002593_44060999_1	chr17	+	740	7	ISM	ENSMUSG00000023963.11	ENST00000619708.4	1481	11	24016	187	24016	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCACTGTCAGAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	44002592	44060999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_44002630_44012367_44012459_44036405_44036540_44041862_44041959_44042815_44042905_44057415_44057504_44060794
ENSMUSG00000023963.11_44036403_44061189_1	chr17	+	805	5	ISM	ENSMUSG00000023963.11	ENST00000619708.4	1481	11	57826	-3	57826	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTTTTTGCAAAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	44036402	44061189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_44036540_44041862_44041959_44042815_44042905_44057415_44057504_44060794
ENSMUSG00000023963.11_44057442_44061515_1	chr17	+	783	2	ISM	ENSMUSG00000023963.11	ENST00000619708.4	1481	11	78865	-329	78865	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATCTTTGCTCGTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	44057441	44061515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_44057504_44060794
ENSMUSG00000023967.10_46421921_46439456_1	chr17	+	495	6	FSM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	9	380	-1	-380	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTCAAGCCCATCTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	46421920	46439456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568_46436639_46439430
ENSMUSG00000023967.10_46421921_46439501_1	chr17	+	540	6	FSM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	9	335	-1	-335	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGCCGTGGGGTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	46421920	46439501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568_46436639_46439430
ENSMUSG00000023967.10_46422032_46439557_1	chr17	+	485	6	FSM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	120	279	110	-279	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGATGATGCATTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	46422031	46439557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568_46436639_46439430
ENSMUSG00000023967.10_46433729_46439719_1	chr17	+	512	4	ISM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	11817	117	11807	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCAGGAGCTGGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	46433728	46439719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46433758_46436215_46436340_46436568_46436639_46439430
ENSMUSG00000023967.10_46436201_46439719_1	chr17	+	498	3	ISM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	14289	117	14279	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCAGGAGCTGGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	46436200	46439719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46436340_46436568_46436639_46439430
ENSMUSG00000023967.10_46436566_46439836_1	chr17	+	479	2	ISM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	14654	0	14644	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTCAGTGCTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	46436565	46439836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46436639_46439430
ENSMUSG00000023972.11_46876091_46878933_1	chr17	-	593	3	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	61497	694	61497	-694	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGGGGAGGCTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	46878933	46876090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46876422_46877028_46877208_46878850
ENSMUSG00000023972.11_46877155_46884423_1	chr17	-	597	5	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	56007	1758	56007	-1758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTCCTGGAGGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	46884423	46877154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345
ENSMUSG00000023972.11_46878953_46885273_1	chr17	-	596	5	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	55157	3556	55157	-3556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTTTGTGCACAAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	46885273	46878952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197
ENSMUSG00000023972.11_46887464_46890579_1	chr17	-	598	5	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	49851	12067	49851	-12067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGCAAAGACCGGATC	NA	NA	NA	NA	NA	NA	NA	NA	46890579	46887463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492
ENSMUSG00000023972.11_46887727_46897224_1	chr17	-	598	5	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	43206	12330	43206	-12330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCCAGATCCGCGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	46897224	46887726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126
ENSMUSG00000023972.11_46887783_46897280_1	chr17	-	598	5	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	43150	12386	43150	-12386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAGTGACCCGAGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	46897280	46887782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126
ENSMUSG00000023972.11_46890255_46897747_1	chr17	-	609	4	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	42683	14858	42683	-14858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCATCGAGGCCCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	46897747	46890254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46890355_46890492_46890627_46897126_46897394_46897639
ENSMUSG00000023972.11_46890549_46901050_1	chr17	-	607	4	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	39380	15152	39380	-15152	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCACACCCAAGCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	46901050	46890548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46890627_46897126_46897394_46897639_46897789_46900937
ENSMUSG00000023972.11_46897173_46901265_1	chr17	-	600	4	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	39165	21776	39165	-21776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGCTGGTCAGCGGCG	NA	NA	NA	NA	NA	NA	NA	NA	46901265	46897172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46897394_46897639_46897789_46900937_46901089_46901186
ENSMUSG00000023972.11_46897700_46902511_1	chr17	-	605	5	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	37919	22303	37919	-22303	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCGGTCAGGGACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	46902511	46897699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440
ENSMUSG00000023973.14_47046682_47048221_1	chr17	-	1274	2	ISM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	14919	51	14900	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTACTGCTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	47048221	47046681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47047835_47048100
ENSMUSG00000023973.14_47046947_47054208_1	chr17	-	1226	4	ISM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	8932	316	8913	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGCCTCCAGAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	47054208	47046946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111
ENSMUSG00000023973.14_47047211_47062993_1	chr17	-	1181	6	FSM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	147	580	128	-580	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTCTTCTGCTGGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	47062993	47047210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
ENSMUSG00000023973.14_47047269_47063103_1	chr17	-	1233	6	FSM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	37	638	18	-638	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGAAGGACTCCGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	47063103	47047268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
ENSMUSG00000023977.16_47241169_47256996_1	chr17	-	1407	13	ISM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	64462	-6	64438	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCCCAGTTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	47256996	47241168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943
ENSMUSG00000023977.16_47241175_47257058_1	chr17	-	1463	13	ISM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	64400	0	64376	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTTTTCTTCCCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	47257058	47241174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943
ENSMUSG00000023977.16_47241321_47259561_1	chr17	-	1414	14	ISM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	61897	146	61873	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACCCTGGTCGGAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	47259561	47241320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498
ENSMUSG00000023977.16_47243390_47262918_1	chr17	-	1407	14	ISM	ENSMUSG00000023977.16	ENST00000372899.6	5728	47	58516	2293	58516	-2215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGACTCAGGTAAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	47262918	47243389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259561_47262807
ENSMUSG00000023977.16_47245040_47264946_1	chr17	-	1393	14	ISM	ENSMUSG00000023977.16	ENST00000372899.6	5728	47	56488	3943	56488	-3865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTACTCCTGCGGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	47264946	47245039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259561_47262807_47262912_47264823
ENSMUSG00000023977.16_47249589_47266810_1	chr17	-	1406	14	ISM	ENSMUSG00000023977.16	ENST00000372899.6	5728	47	54624	8492	54624	-8414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGCGATAAGGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	47266810	47249588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259561_47262807_47262912_47264823_47264986_47265795_47265890_47266707
ENSMUSG00000023977.16_47253702_47268069_1	chr17	-	1372	13	ISM	ENSMUSG00000023977.16	ENST00000372899.6	5728	47	53365	12605	53365	-12527	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAACTGGCCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	47268069	47253701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259561_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039
ENSMUSG00000023977.16_47254335_47268307_1	chr17	-	1393	13	ISM	ENSMUSG00000023977.16	ENST00000372899.6	5728	47	53127	13238	53127	-13160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGACCTGCACATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	47268307	47254334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259561_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230
ENSMUSG00000023977.16_47255992_47272552_1	chr17	-	1408	12	ISM	ENSMUSG00000023977.16	ENST00000372899.6	5728	47	48882	14895	48882	-14817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTGCCTTGTAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	47272552	47255991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47256028_47256943_47257093_47259498_47259561_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424
ENSMUSG00000023977.16_47264894_47278012_1	chr17	-	1399	13	ISM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	43446	23719	43422	-23719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGCTCTGTGAGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	47278012	47264893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957
ENSMUSG00000023977.16_47265808_47278219_1	chr17	-	1408	13	ISM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	43239	24633	43215	-24633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGGCAAAGGTAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	47278219	47265807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115
ENSMUSG00000023977.16_47266790_47280205_1	chr17	-	1418	14	ISM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	41253	25615	41229	-25615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCGATGGTCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	47280205	47266789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116
ENSMUSG00000023977.16_47267551_47283902_1	chr17	-	1430	15	ISM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	37556	26376	37532	-26376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAGAGCTCTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	47283902	47267550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789
ENSMUSG00000023977.16_47268266_47284942_1	chr17	-	1373	14	ISM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	36516	27091	36492	-27091	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCCACAAGGACATGATC	NA	NA	NA	NA	NA	NA	NA	NA	47284942	47268265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842
ENSMUSG00000023977.16_47270401_47286735_1	chr17	-	1386	14	ISM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	34723	29226	34699	-29226	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTTCAAGTATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	47286735	47270400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665
ENSMUSG00000023977.16_47272475_47286956_1	chr17	-	1378	14	ISM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	34502	31300	34478	-31300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGTAGAGCATCACGGG	NA	NA	NA	NA	NA	NA	NA	NA	47286956	47272474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852
ENSMUSG00000023977.16_47274672_47292332_1	chr17	-	1378	14	ISM	ENSMUSG00000023977.16	ENST00000372899.6	5728	47	29102	33575	29102	-33497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGCCAAAGAGTTCAACC	NA	NA	NA	NA	NA	NA	NA	NA	47292332	47274671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291414_47291514_47292279
ENSMUSG00000023977.16_47284875_47311602_1	chr17	-	1395	13	ISM	ENSMUSG00000023977.16	ENST00000372899.6	5728	47	9832	43778	9832	-43700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATGGTGCAGGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	47311602	47284874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47284972_47286665_47286766_47286852_47287017_47291414_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511
ENSMUSG00000023977.16_47284930_47311663_1	chr17	-	1401	13	ISM	ENSMUSG00000023977.16	ENST00000372899.6	5728	47	9771	43833	9771	-43755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGCCAGAGTGGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	47311663	47284929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47284972_47286665_47286766_47286852_47287017_47291414_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511
ENSMUSG00000023977.16_47286855_47321097_1	chr17	-	1395	12	ISM	ENSMUSG00000023977.16	ENST00000372899.6	5728	47	337	45758	337	-45680	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGTATTCCTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	47321097	47286854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47287017_47291414_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ENSMUSG00000023977.16_47286918_47321161_1	chr17	-	1396	12	ISM	ENSMUSG00000023977.16	ENST00000372899.6	5728	47	273	45821	273	-45743	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGCTACACTGCCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	47321161	47286917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47287017_47291414_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ENSMUSG00000023977.16_47292292_47321405_1	chr17	-	1430	10	ISM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	53	51117	29	-51117	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATTTGCTAAAGTAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	47321405	47292291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ENSMUSG00000023980.8_47801067_47804629_1	chr17	-	399	2	NNC	ENSMUSG00000023980.8	novel	994	7	NA	NA	7737	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGGGGCTGGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	47804629	47801066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_47801205_47804368
ENSMUSG00000023980.8_47801143_47805415_1	chr17	-	474	3	ISM	ENSMUSG00000023980.8	ENST00000372982.8	994	7	6951	76	6951	-76	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAATGGCGAGGAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	47805415	47801142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47801208_47804369_47804630_47805266
ENSMUSG00000023980.8_47801143_47805415_2	chr17	-	467	3	NNC	ENSMUSG00000023980.8	novel	994	7	NA	NA	6951	-76	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAATGGCGAGGAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	47805415	47801142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_47801208_47804376_47804630_47805266
ENSMUSG00000023980.8_47804476_47809165_1	chr17	-	490	4	ISM	ENSMUSG00000023980.8	ENST00000372982.8	994	7	3201	3409	3201	-3409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGCCTGCCTCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	47809165	47804475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47804630_47805266_47805415_47807502_47807628_47809102
ENSMUSG00000023980.8_47804592_47809505_1	chr17	-	415	5	ISM	ENSMUSG00000023980.8	ENST00000372982.8	994	7	2861	3525	2861	-3525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCTTCCTTCTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	47809505	47804591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464
ENSMUSG00000023980.8_47805290_47812225_1	chr17	-	429	5	ISM	ENSMUSG00000023980.8	ENST00000372982.8	994	7	141	4223	141	-4223	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGATGTCAGCACTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	47812225	47805289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208
ENSMUSG00000023980.8_47805326_47812291_1	chr17	-	459	5	ISM	ENSMUSG00000023980.8	ENST00000372982.8	994	7	75	4259	75	-4259	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCCAAGACAGGCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	47812291	47805325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208
ENSMUSG00000023980.8_47805395_47812327_1	chr17	-	426	5	ISM	ENSMUSG00000023980.8	ENST00000372982.8	994	7	39	4328	39	-4328	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTACCAGATCCTTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	47812327	47805394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208
ENSMUSG00000023984.18_47923967_47983221_1	chr17	+	926	5	ISM	ENSMUSG00000023984.18	ENST00000684631.1	3161	9	80	8898	80	-8898	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTACCTGTGCAAGGACTA	NA	NA	NA	NA	NA	NA	NA	NA	47923966	47983221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47924047_47929738_47929988_47933809_47934080_47960874_47960949_47982968
ENSMUSG00000023988.9_47910577_47913340_1	chr17	-	2271	2	ISM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	9077	321	9077	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCACCAGCCCAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	47913340	47910576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47912824_47913316
ENSMUSG00000023988.9_47910692_47913610_1	chr17	-	2283	3	ISM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	8807	436	8807	-436	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAAAAGTGCTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	47913610	47910691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47912824_47913316_47913420_47913562
ENSMUSG00000023988.9_47910980_47915238_1	chr17	-	2301	5	ISM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	7179	724	7179	-724	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGTTAACTGCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	47915238	47910979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179
ENSMUSG00000023988.9_47911054_47915280_1	chr17	-	2269	5	ISM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	7137	798	7137	-798	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCATCCGGTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	47915280	47911053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179
ENSMUSG00000023988.9_47911157_47917829_1	chr17	-	2270	6	ISM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	4588	901	4588	-901	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTCTCCTCTCCTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	47917829	47911156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763
ENSMUSG00000023988.9_47911191_47917906_1	chr17	-	2313	6	ISM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	4511	935	4511	-935	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCAAGCTCTCCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	47917906	47911190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763
ENSMUSG00000023988.9_47911288_47917926_1	chr17	-	2236	6	ISM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	4491	1032	4491	-1032	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCATATTTGCTTACAC	NA	NA	NA	NA	NA	NA	NA	NA	47917926	47911287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763
ENSMUSG00000023988.9_47911493_47922073_1	chr17	-	2273	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	344	1237	344	-1237	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGTAGCAGCCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	47922073	47911492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
ENSMUSG00000023988.9_47911556_47922134_1	chr17	-	2271	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	283	1300	283	-1300	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGAGGGCTAGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	47922134	47911555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
ENSMUSG00000023988.9_47911648_47922222_1	chr17	-	2267	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	195	1392	195	-1392	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTTCCCTGTGTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	47922222	47911647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
ENSMUSG00000023990.19_48080163_48102329_1	chr17	+	1322	9	FSM	ENSMUSG00000023990.19	ENST00000419574.6	2329	9	-5	1012	-5	-1011	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCCAGCAGGTGGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	48080162	48102329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_48080445_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ENSMUSG00000023990.19_48080282_48102409_1	chr17	+	1283	9	FSM	ENSMUSG00000023990.19	ENST00000419574.6	2329	9	114	932	114	-931	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTGAGCAAATGCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	48080281	48102409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_48080445_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ENSMUSG00000023990.19_48080341_48102538_1	chr17	+	1353	9	FSM	ENSMUSG00000023990.19	ENST00000419574.6	2329	9	173	803	173	-802	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTTACCCCGATACCCT	NA	NA	NA	NA	NA	NA	NA	NA	48080340	48102538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_48080445_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ENSMUSG00000023990.19_48097080_48102702_1	chr17	+	1223	8	FSM	ENSMUSG00000023990.19	ENSMUST00000024786.14	2296	8	435	638	435	-638	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGCTTCAGCATGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	48097079	48102702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ENSMUSG00000023990.19_48097080_48102751_1	chr17	+	1272	8	FSM	ENSMUSG00000023990.19	ENSMUST00000024786.14	2296	8	435	589	435	-589	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCCAAGGAGCAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	48097079	48102751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ENSMUSG00000023990.19_48097333_48102933_1	chr17	+	1282	7	ISM	ENSMUSG00000023990.19	ENSMUST00000024786.14	2296	8	688	407	688	-407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTCGGCTTCGGGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	48097332	48102933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ENSMUSG00000023990.19_48097399_48102981_1	chr17	+	1264	7	ISM	ENSMUSG00000023990.19	ENSMUST00000024786.14	2296	8	754	359	754	-359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAAGAACAGGGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	48097398	48102981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ENSMUSG00000023990.19_48098950_48103188_1	chr17	+	1332	5	ISM	ENSMUSG00000023990.19	ENSMUST00000024786.14	2296	8	2305	152	2305	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTGGGGCATCCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	48098949	48103188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ENSMUSG00000023990.19_48099159_48103341_1	chr17	+	1366	4	ISM	ENSMUSG00000023990.19	ENSMUST00000024786.14	2296	8	2514	-1	2514	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTTGTCCTGGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	48099158	48103341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_48099219_48099833_48099910_48100585_48100734_48102259
ENSMUSG00000023993.8_48666944_48673941_1	chr17	+	942	6	FSM	ENSMUSG00000023993.8	ENST00000426005.6	927	6	-11	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGTACACTTTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	48666943	48673941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_48667011_48667162_48667496_48671916_48672026_48672535_48672622_48673023_48673077_48673647
ENSMUSG00000023993.8_48667159_48673941_1	chr17	+	877	5	NNC	ENSMUSG00000023993.8	novel	1235	6	NA	NA	204	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGTACACTTTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	48667158	48673941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_48667496_48671918_48672026_48672535_48672622_48673023_48673077_48673647
ENSMUSG00000023993.8_48667352_48673678_1	chr17	+	370	4	ISM	ENSMUSG00000023993.8	ENST00000373127.8	874	5	397	259	397	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGGGACTACCCTCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	48667351	48673678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_48667496_48671916_48672026_48672535_48672622_48673647
ENSMUSG00000023993.8_48667391_48673751_1	chr17	+	404	4	ISM	ENSMUSG00000023993.8	ENST00000373127.8	874	5	436	186	436	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTCTTGATCCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	48667390	48673751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_48667496_48671916_48672026_48672535_48672622_48673647
ENSMUSG00000023993.8_48667450_48673798_1	chr17	+	392	4	ISM	ENSMUSG00000023993.8	ENST00000373127.8	874	5	495	139	495	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCCTCTGCCTCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	48667449	48673798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_48667496_48671916_48672026_48672535_48672622_48673647
ENSMUSG00000024002.19_32423884_32448709_1	chr17	-	4279	11	ISM	ENSMUSG00000024002.19	ENSMUST00000120276.9	4486	13	54374	0	54362	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCATGGAACCCTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	32448709	32423883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_32425968_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390
ENSMUSG00000024002.19_32423987_32472174_1	chr17	-	4336	12	ISM	ENSMUSG00000024002.19	ENSMUST00000120276.9	4486	13	30909	103	30897	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAATCATTTTACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	32472174	32423986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_32425968_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014
ENSMUSG00000024002.19_32423987_32503064_1	chr17	-	4364	13	FSM	ENSMUSG00000024002.19	ENSMUST00000120276.9	4486	13	19	103	7	-103	multi-exon	FALSE	canonical	NA	NA	NA	NA	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAATCATTTTACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	32503064	32423986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_32425968_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503036
ENSMUSG00000024002.19_32430140_32440234_1	chr17	-	1062	6	ISM	ENSMUSG00000024002.19	ENST00000360016.9	2406	11	63468	-1	62837	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTGATTCCTGTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	32440234	32430139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119
ENSMUSG00000024002.19_32432013_32440961_1	chr17	-	1113	6	ISM	ENSMUSG00000024002.19	ENST00000360016.9	2406	11	62741	1872	62110	-1872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCTAAGTCTAGATATCA	NA	NA	NA	NA	NA	NA	NA	NA	32440961	32432012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846
ENSMUSG00000024002.19_32439135_32448459_1	chr17	-	1128	6	ISM	ENSMUSG00000024002.19	ENST00000360016.9	2406	11	55243	8994	54612	-8994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCTCCAAGGTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	32448459	32439134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390
ENSMUSG00000024002.19_32440186_32448682_1	chr17	-	1156	5	ISM	ENSMUSG00000024002.19	ENST00000360016.9	2406	11	55020	10045	54389	-10045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCACTGGGTCTGCACGA	NA	NA	NA	NA	NA	NA	NA	NA	32448682	32440185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390
ENSMUSG00000024002.19_32440343_32503538_1	chr17	-	1073	6	ISM	ENSMUSG00000024002.19	ENST00000360016.9	2406	11	164	10202	164	-10202	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAGAAGGATGTACCGG	NA	NA	NA	NA	NA	NA	NA	NA	32503538	32440342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
ENSMUSG00000024002.19_32440399_32503651_1	chr17	-	1130	6	ISM	ENSMUSG00000024002.19	ENST00000360016.9	2406	11	51	10258	51	-10258	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCCAAGACCGCCAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	32503651	32440398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
ENSMUSG00000024002.19_32440440_32503651_1	chr17	-	1089	6	ISM	ENSMUSG00000024002.19	ENST00000360016.9	2406	11	51	10299	51	-10299	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCATCGACCCCATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	32503651	32440439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
ENSMUSG00000024006.18_29190517_29193320_1	chr17	-	1294	3	ISM	ENSMUSG00000024006.18	ENSMUST00000232836.2	2778	13	26345	-175	26345	175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCCCTCCACCCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	29193320	29190516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_29191651_29192018_29192114_29193255
ENSMUSG00000024006.18_29193278_29226827_1	chr17	-	1298	12	ISM	ENSMUSG00000024006.18	ENSMUST00000119274.3	3354	14	142	3424	59	-2586	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGACTGGGAACACATC	NA	NA	NA	NA	NA	NA	NA	NA	29226827	29193277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219119_29226684
ENSMUSG00000024007.16_29470478_29482912_1	chr17	-	513	4	FSM	ENSMUSG00000024007.16	ENSMUST00000024802.10	1462	4	248	701	248	-701	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGCTGTCCCCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	29482912	29470477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_29470700_29471223_29471293_29480710_29480866_29482845
ENSMUSG00000024007.16_29471223_29483160_1	chr17	-	540	3	ISM	ENSMUSG00000024007.16	ENSMUST00000024802.10	1462	4	0	1446	0	-1446	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTACTCGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	29483160	29471222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_29471293_29480710_29480866_29482845
ENSMUSG00000024012.19_29551693_29561904_1	chr17	-	808	11	FSM	ENSMUSG00000024012.19	ENST00000405630.1	746	11	-62	0	-62	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGGAGTAACCTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	29561904	29551692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552975_29555187_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796
ENSMUSG00000024012.19_29551693_29561904_2	chr17	-	803	11	NNC	ENSMUSG00000024012.19	novel	746	11	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGGAGTAACCTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	29561904	29551692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552975_29555187_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559867_29561796
ENSMUSG00000024012.19_29551693_29561904_3	chr17	-	802	11	NNC	ENSMUSG00000024012.19	novel	746	11	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGGAGTAACCTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	29561904	29551692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552975_29555187_29555286_29557715_29557776_29558770_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796
ENSMUSG00000024012.19_29551693_29561904_4	chr17	-	802	11	NNC	ENSMUSG00000024012.19	novel	746	11	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGGAGTAACCTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	29561904	29551692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_29551747_29552487_29552564_29552748_29552817_29552931_29552975_29555187_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796
ENSMUSG00000024012.19_29551693_29561904_5	chr17	-	801	11	NNC	ENSMUSG00000024012.19	novel	746	11	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGGAGTAACCTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	29561904	29551692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_29551753_29552487_29552564_29552748_29552810_29552931_29552975_29555187_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796
ENSMUSG00000024012.19_29555213_29566908_1	chr17	-	981	8	ISM	ENSMUSG00000024012.19	ENSMUST00000118366.9	1897	12	0	4163	0	-3520	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACTTGGTGGACGACAG	NA	NA	NA	NA	NA	NA	NA	NA	29566908	29555212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ENSMUSG00000024018.19_29922810_29935970_1	chr17	-	845	4	FSM	ENSMUSG00000024018.19	ENSMUST00000128751.3	1397	4	48	504	13	-504	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAGAAAGAATGCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	29935970	29922809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_29923444_29924244_29924298_29924462_29924558_29935907
ENSMUSG00000024019.19_29882201_29905023_1	chr17	+	923	8	ISM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	2632	19930	2632	-19930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGACACTGAGCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	29882200	29905023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824
ENSMUSG00000024026.14_30812486_30819066_1	chr17	-	927	4	ISM	ENSMUSG00000024026.14	ENSMUST00000167624.2	895	7	12567	646	12510	354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTAACTTTACTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30819066	30812485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012
ENSMUSG00000024026.14_30812653_30823039_1	chr17	-	893	5	ISM	ENSMUSG00000024026.14	ENSMUST00000167624.2	895	7	8594	813	8537	187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTTTTTGTGTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	30823039	30812652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993
ENSMUSG00000024026.14_30812723_30823076_1	chr17	-	860	5	ISM	ENSMUSG00000024026.14	ENSMUST00000167624.2	895	7	8557	883	8500	117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTCTGGGGTTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	30823076	30812722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993
ENSMUSG00000024026.14_30812840_30831606_1	chr17	-	908	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	27	8930	27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAACAGCTCCCTTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	30831606	30812839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ENSMUSG00000024026.14_30815347_30845783_1	chr17	-	740	6	ISM	ENSMUSG00000024026.14	ENSMUST00000235547.2	1127	8	62	3512	62	-2507	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTATTTGCTAGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	30845783	30815346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441_30831771_30845755
ENSMUSG00000024034.14_31402788_31416723_1	chr17	-	1399	11	ISM	ENSMUSG00000024034.14	ENSMUST00000024833.13	2738	12	0	4549	0	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGGAGTGACCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	31416723	31402787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_31402941_31403542_31403686_31405476_31405573_31407273_31407444_31408112_31408279_31408646_31408691_31409974_31410101_31412427_31412552_31412882_31413000_31413871_31413983_31416574
ENSMUSG00000024034.14_31402788_31416723_2	chr17	-	1393	11	ISM	ENSMUSG00000024034.14	ENSMUST00000237740.2	2403	12	422	3798	0	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGGAGTGACCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	31416723	31402787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_31402941_31403542_31403686_31405476_31405573_31407273_31407444_31408112_31408279_31408646_31408691_31409974_31410101_31412427_31412552_31412882_31413000_31413871_31413977_31416574
ENSMUSG00000024034.14_31402788_31417145_1	chr17	-	1397	12	ISM	ENSMUSG00000024034.14	ENSMUST00000236793.2	2674	13	689	3798	0	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGGAGTGACCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	31417145	31402787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_31402941_31403542_31403686_31405476_31405573_31407273_31407444_31408112_31408279_31408646_31408691_31409974_31410101_31412427_31412552_31412882_31413000_31413871_31413983_31416574_31416717_31417140
ENSMUSG00000024034.14_31402892_31417214_1	chr17	-	1362	12	ISM	ENSMUSG00000024034.14	ENSMUST00000236793.2	2674	13	620	3902	34	-104	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGGTGCAACAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	31417214	31402891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_31402941_31403542_31403686_31405476_31405573_31407273_31407444_31408112_31408279_31408646_31408691_31409974_31410101_31412427_31412552_31412882_31413000_31413871_31413983_31416574_31416717_31417140
ENSMUSG00000024037.14_31715783_31721858_1	chr17	-	688	6	ISM	ENSMUSG00000024037.14	ENST00000330317.6	950	8	6993	-3	6993	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCCCTTCCCAGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	31721858	31715782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_31715903_31717914_31718147_31718785_31718848_31719587_31719687_31720188_31720250_31721744
ENSMUSG00000024037.14_31715783_31722553_1	chr17	-	782	8	ISM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	9172	2487	6298	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCCCTTCCCAGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	31722553	31715782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483
ENSMUSG00000024037.14_31715783_31722640_1	chr17	-	869	8	ISM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	9085	2487	6211	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCCCTTCCCAGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	31722640	31715782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483
ENSMUSG00000024037.14_31718009_31728795_1	chr17	-	686	7	ISM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	2930	4713	56	-2223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCCCCCCTGGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	31728795	31718008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742
ENSMUSG00000024037.14_31718020_31728886_1	chr17	-	766	7	ISM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	2839	4724	-35	-2234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGACTGCCGTGATGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	31728886	31718019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742
ENSMUSG00000024037.14_31718783_31731192_1	chr17	-	760	8	ISM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	533	5487	533	-2997	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACGGCGAGTTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	31731192	31718782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
ENSMUSG00000024037.14_31719652_31731316_1	chr17	-	755	7	ISM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	409	6356	409	-3866	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCAGCTGCAGTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	31731316	31719651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
ENSMUSG00000024037.14_31720188_31731470_1	chr17	-	875	6	ISM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	255	6892	255	-4402	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGGTGTGCCTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	31731470	31720187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
ENSMUSG00000024038.18_31739159_31746922_1	chr17	+	840	3	ISM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	67	3383	0	703	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCAGACAAGACAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	31739158	31746922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_31739236_31740542_31740667_31746283
ENSMUSG00000024038.18_31739159_31746975_1	chr17	+	893	3	ISM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	67	3330	0	756	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCCAGCCACGGGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	31739158	31746975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_31739236_31740542_31740667_31746283
ENSMUSG00000024038.18_31740634_31747095_1	chr17	+	845	2	ISM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	1542	3210	1475	876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATCCGGAACCAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	31740633	31747095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_31740667_31746283
ENSMUSG00000024038.18_31746620_31750192_1	chr17	+	865	2	ISM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	7528	113	7461	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGTCTTCAGGACGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	31746619	31750192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_31747376_31750083
ENSMUSG00000024038.18_31746680_31750305_1	chr17	+	918	2	ISM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	7588	0	7521	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTGGTTATTTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	31746679	31750305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_31747376_31750083
ENSMUSG00000024038.18_31746749_31750305_1	chr17	+	849	2	ISM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	7657	0	7590	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTGGTTATTTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	31746748	31750305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_31747376_31750083
ENSMUSG00000024043.14_68156047_68164524_1	chr17	-	362	4	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	38737	0	38737	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGATTGTTCAATAATCT	NA	NA	NA	NA	NA	NA	NA	NA	68164524	68156046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_68156113_68159905_68160031_68162428_68162486_68164410
ENSMUSG00000024043.14_68159968_68165262_1	chr17	-	348	4	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	37999	3921	37999	-3921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGCTCAACAGTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	68165262	68159967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_68160031_68162428_68162486_68164410_68164525_68165148
ENSMUSG00000024043.14_68165224_68171588_1	chr17	-	337	3	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	31673	9177	31673	-9177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAACTGCTGCTGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	68171588	68165223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_68165347_68168267_68168351_68171457
ENSMUSG00000024043.14_68165303_68175964_1	chr17	-	306	4	ISM	ENSMUSG00000024043.14	ENSMUST00000163865.8	2037	17	32502	12573	27297	-9256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCGCATGAACCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	68175964	68165302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_68165347_68168267_68168351_68171457_68171618_68175945
ENSMUSG00000024043.14_68171466_68178913_1	chr17	-	361	4	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	24348	15419	24348	-15419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAAAGTAGGTGACGAA	NA	NA	NA	NA	NA	NA	NA	NA	68178913	68171465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_68171621_68175945_68176024_68178683_68178776_68178877
ENSMUSG00000024043.14_68171531_68178964_1	chr17	-	347	4	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	24297	15484	24297	-15484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTTCAGAGAGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	68178964	68171530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_68171621_68175945_68176024_68178683_68178776_68178877
ENSMUSG00000024043.14_68175958_68180044_1	chr17	-	351	4	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	23217	19911	23217	-19911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAAGTCAAGGTACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	68180044	68175957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_68176024_68178683_68178776_68178877_68179044_68180017
ENSMUSG00000024043.14_68178987_68188474_1	chr17	-	329	4	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	14787	22940	14787	-22940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGACATGAAGAAAATCCG	NA	NA	NA	NA	NA	NA	NA	NA	68188474	68178986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_68179044_68180017_68180161_68182568_68182654_68188430
ENSMUSG00000024043.14_68180130_68203105_1	chr17	-	347	5	NIC	ENSMUSG00000024043.14	novel	1753	15	NA	NA	156	-24083	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCTGAAGAGCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	68203105	68180129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_-_68180161_68182568_68182654_68188430_68188521_68191724_68191804_68203043
ENSMUSG00000024043.14_68182565_68203105_1	chr17	-	316	4	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	156	26518	156	-26518	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCATGTCCCCTGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	68203105	68182564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_68182654_68188430_68188517_68191724_68191804_68203043
ENSMUSG00000024043.14_68188431_68203219_1	chr17	-	341	3	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	42	32384	42	-32384	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCTTTGATGTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	68203219	68188430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_68188517_68191724_68191804_68203043
ENSMUSG00000024048.16_71300798_71303188_1	chr17	-	1066	2	ISM	ENSMUSG00000024048.16	ENSMUST00000233089.2	947	4	1114	-484	1114	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATACAGAGATTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	71303188	71300797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71301780_71303104
ENSMUSG00000024048.16_71300849_71303267_1	chr17	-	1094	2	ISM	ENSMUSG00000024048.16	ENSMUST00000233089.2	947	4	1035	-433	1035	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATACAGTTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	71303267	71300848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71301780_71303104
ENSMUSG00000024048.16_71301004_71303799_1	chr17	-	1046	3	ISM	ENSMUSG00000024048.16	ENSMUST00000233089.2	947	4	503	-278	503	278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTACCTCGTCCATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	71303799	71301003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71301780_71303104_71303267_71303691
ENSMUSG00000024048.16_71301078_71303890_1	chr17	-	1063	3	ISM	ENSMUSG00000024048.16	ENSMUST00000233089.2	947	4	412	-204	412	204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTTCTTTTGGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	71303890	71301077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71301780_71303104_71303267_71303691
ENSMUSG00000024048.16_71301282_71309277_1	chr17	-	1034	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	272	631	272	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTAGCGTTATTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	71309277	71301281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
ENSMUSG00000024048.16_71301395_71309413_1	chr17	-	1057	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	136	744	136	-106	multi-exon	FALSE	canonical	NA	NA	NA	NA	4883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTCTTGTCCCTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	71309413	71301394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
ENSMUSG00000024048.16_71301544_71309549_1	chr17	-	1044	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	0	893	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCCCAATGCATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	71309549	71301543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
ENSMUSG00000024049.16_71326555_71371504_1	chr17	+	1764	12	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	67	61860	0	-61860	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTCACTGGCTTGATA	NA	NA	NA	NA	NA	NA	NA	NA	71326554	71371504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71326647_71329842_71330193_71341565_71341707_71343268_71343519_71344210_71344369_71351480_71351574_71352538_71352628_71352731_71352792_71354718_71354884_71359608_71359771_71368119_71368262_71371442
ENSMUSG00000024049.16_71330126_71384307_1	chr17	+	1765	14	ISM	ENSMUSG00000024049.16	ENST00000261606.11	4714	35	265	49057	265	-49057	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCGCTTTGCTCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	71330125	71384307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71330193_71341565_71341707_71343268_71343519_71344210_71344369_71351480_71351574_71352538_71352628_71352731_71352792_71354718_71354884_71359608_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251
ENSMUSG00000024049.16_71343380_71387791_1	chr17	+	1772	14	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	1810	45573	1810	-45573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCAGAGCTATATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	71343379	71387791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71343519_71344210_71344369_71351480_71351574_71352538_71352628_71352731_71352792_71354718_71354884_71359608_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768
ENSMUSG00000024049.16_71344235_71389268_1	chr17	+	1779	14	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	17747	44096	2665	-44096	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAATGGAGCCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	71344234	71389268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71344369_71351480_71351574_71352538_71352628_71352731_71352792_71354718_71354884_71359608_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71389197
ENSMUSG00000024049.16_71344298_71389314_1	chr17	+	1762	14	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	17810	44050	2728	-44050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGGTAGCAACCCTAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	71344297	71389314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71344369_71351480_71351574_71352538_71352628_71352731_71352792_71354718_71354884_71359608_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71389197
ENSMUSG00000024049.16_71351506_71389432_1	chr17	+	1784	13	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	25018	43932	9936	-43932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCCGAGGAGGAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	71351505	71389432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71351574_71352538_71352628_71352731_71352792_71354718_71354884_71359608_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71389197
ENSMUSG00000024049.16_71352574_71391302_1	chr17	+	1516	12	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	11004	42062	11004	-42062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCCAGATACGACCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	71352573	71391302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71352628_71352731_71352792_71354718_71354884_71359608_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71391232
ENSMUSG00000024049.16_71352755_71391328_1	chr17	+	1759	12	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	26267	42036	11185	-42036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTACAGGCTATTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	71352754	71391328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71352792_71354718_71354884_71359608_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71389197_71389492_71391232
ENSMUSG00000024049.16_71354719_71394466_1	chr17	+	1557	11	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	13149	38898	13149	-38898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTTCCAAGTGTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	71354718	71394466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71354884_71359608_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71391232_71391430_71394438
ENSMUSG00000024049.16_71354808_71394502_1	chr17	+	1504	11	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	13238	38862	13238	-38862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGCGCCCTCCACGGTG	NA	NA	NA	NA	NA	NA	NA	NA	71354807	71394502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71354884_71359608_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71391232_71391430_71394438
ENSMUSG00000024049.16_71354825_71394478_1	chr17	+	1757	12	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	28337	38886	13255	-38886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGCAATGAACATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	71354824	71394478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71354884_71359608_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71389197_71389492_71391232_71391430_71394438
ENSMUSG00000024049.16_71354862_71394550_1	chr17	+	1498	11	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	13292	38814	13292	-38814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGCTGTTCCAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	71354861	71394550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71354884_71359608_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71391232_71391430_71394438
ENSMUSG00000024049.16_71359610_71396856_1	chr17	+	1823	12	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	33122	36508	18040	-36508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCTGGTTCTCCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	71359609	71396856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71389197_71389492_71391232_71391430_71394438_71394566_71396817
ENSMUSG00000024049.16_71359621_71396857_1	chr17	+	1519	11	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	18051	36507	18051	-36507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGGTTCTCCAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	71359620	71396857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71391232_71391430_71394438_71394566_71396817
ENSMUSG00000024049.16_71359680_71396907_1	chr17	+	1510	11	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	18110	36457	18110	-36457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGGTTACTTTGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	71359679	71396907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71391232_71391430_71394438_71394566_71396817
ENSMUSG00000024049.16_71359701_71396881_1	chr17	+	1757	12	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	33213	36483	18131	-36483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTCTACTCAGGCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	71359700	71396881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71389197_71389492_71391232_71391430_71394438_71394566_71396817
ENSMUSG00000024049.16_71359730_71396971_1	chr17	+	1524	11	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	18160	36393	18160	-36393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGCAGCCATTGTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	71359729	71396971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71391232_71391430_71394438_71394566_71396817
ENSMUSG00000024049.16_71359755_71396934_1	chr17	+	1756	12	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	33267	36430	18185	-36430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAGTGCCAAAGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	71359754	71396934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71389197_71389492_71391232_71391430_71394438_71394566_71396817
ENSMUSG00000024049.16_71368133_71399114_1	chr17	+	1521	11	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	26563	34250	26563	-34250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGCTACGTGTTCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	71368132	71399114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71391232_71391430_71394438_71394566_71396817_71397003_71399094
ENSMUSG00000024049.16_71368187_71399171_1	chr17	+	1524	11	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	26617	34193	26617	-34193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGCTGGACCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	71368186	71399171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71391232_71391430_71394438_71394566_71396817_71397003_71399094
ENSMUSG00000024049.16_71368216_71399141_1	chr17	+	1759	12	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	41728	34223	26646	-34223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAACCAGGCAGGCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	71368215	71399141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71389197_71389492_71391232_71391430_71394438_71394566_71396817_71397003_71399094
ENSMUSG00000024049.16_71371473_71406988_1	chr17	+	1497	11	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	29903	26376	29903	-26376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCCTTGAACTTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	71371472	71406988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948
ENSMUSG00000024049.16_71371515_71407003_1	chr17	+	1764	12	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	45027	26361	29945	-26361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTGATCAGATGACTC	NA	NA	NA	NA	NA	NA	NA	NA	71371514	71407003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71389197_71389492_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948
ENSMUSG00000024049.16_71371526_71407044_1	chr17	+	1500	11	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	29956	26320	29956	-26320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGATTATGTACCTACT	NA	NA	NA	NA	NA	NA	NA	NA	71371525	71407044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948
ENSMUSG00000024049.16_71371561_71407070_1	chr17	+	1785	12	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	45073	26294	29991	-26294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCACGATTAGAAGTCGA	NA	NA	NA	NA	NA	NA	NA	NA	71371560	71407070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71389197_71389492_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948
ENSMUSG00000024049.16_71379138_71408258_1	chr17	+	1768	12	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	52650	25106	37568	-25106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAGTAAGTACCCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	71379137	71408258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71389197_71389492_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218
ENSMUSG00000024049.16_71379143_71412491_1	chr17	+	1508	12	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	37573	20873	37573	-20873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAGAAAGGTCAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	71379142	71412491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457
ENSMUSG00000024049.16_71384312_71413213_1	chr17	+	1506	12	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	42742	20151	42742	-20151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACCGAAACACGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	71384311	71413213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71384436_71384759_71384935_71387768_71387891_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457_71412595_71413198
ENSMUSG00000024049.16_71384367_71413260_1	chr17	+	1498	12	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	42797	20104	42797	-20104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGAGGATGAAGGGACGT	NA	NA	NA	NA	NA	NA	NA	NA	71384366	71413260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71384436_71384759_71384935_71387768_71387891_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457_71412595_71413198
ENSMUSG00000024049.16_71384416_71413330_1	chr17	+	1519	12	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	42846	20034	42846	-20034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATTGGAGACGGTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	71384415	71413330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71384436_71384759_71384935_71387768_71387891_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457_71412595_71413198
ENSMUSG00000024049.16_71384863_71415669_1	chr17	+	1518	13	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	43293	17695	43293	-17695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGCTGTTGAAATGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	71384862	71415669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71384935_71387768_71387891_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457_71412595_71413198_71413344_71415295_71415356_71415620
ENSMUSG00000024049.16_71384869_71415355_1	chr17	+	1757	13	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	58381	18009	43299	-18009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAATAGACACTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	71384868	71415355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71384935_71387768_71387891_71389197_71389492_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457_71412595_71413198_71413344_71415295
ENSMUSG00000024049.16_71387789_71416818_1	chr17	+	1542	13	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	46219	16546	46219	-16546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTCATCACAGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	71387788	71416818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71387891_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457_71412595_71413198_71413344_71415295_71415356_71415620_71415689_71416721
ENSMUSG00000024049.16_71387814_71416784_1	chr17	+	1777	14	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	61326	16580	46244	-16580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAGAAACATGACTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	71387813	71416784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71387891_71389197_71389492_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457_71412595_71413198_71413344_71415295_71415356_71415620_71415689_71416721
ENSMUSG00000024049.16_71389257_71417769_1	chr17	+	1760	14	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	62769	15595	47687	-15595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAGCTCGTGGATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	71389256	71417769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71389492_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457_71412595_71413198_71413344_71415295_71415356_71415620_71415689_71416721_71416836_71417701
ENSMUSG00000024049.16_71389392_71418999_1	chr17	+	1745	16	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	62904	14365	47822	-14365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTATTACCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	71389391	71418999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71389492_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457_71412595_71413198_71413344_71415295_71415356_71415620_71415689_71416721_71416836_71417701_71417790_71418805_71418845_71418938
ENSMUSG00000024049.16_71389460_71419044_1	chr17	+	1722	16	ISM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	62972	14320	47890	-14320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTACATGCAAACTTAC	NA	NA	NA	NA	NA	NA	NA	NA	71389459	71419044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71389492_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457_71412595_71413198_71413344_71415295_71415356_71415620_71415689_71416721_71416836_71417701_71417790_71418805_71418845_71418938
ENSMUSG00000024049.16_71391269_71424411_1	chr17	+	1777	16	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	49699	8953	49699	-8953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGACTGGACACCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	71391268	71424411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457_71412595_71413198_71413344_71415295_71415356_71415620_71415689_71416721_71416836_71417701_71417790_71418805_71418845_71418938_71419045_71424288
ENSMUSG00000024049.16_71396900_71433267_1	chr17	+	1756	17	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	55330	97	55330	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACCAGCGACTTCACCG	NA	NA	NA	NA	NA	NA	NA	NA	71396899	71433267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457_71412595_71413198_71413344_71415295_71415356_71415620_71415689_71416721_71416836_71417701_71417790_71418805_71418845_71418938_71419045_71424288_71424453_71427640_71427678_71429533_71429608_71433070
ENSMUSG00000024049.16_71396941_71433331_1	chr17	+	1779	17	ISM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	55371	33	55371	-33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCTCCCAAGGGCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	71396940	71433331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457_71412595_71413198_71413344_71415295_71415356_71415620_71415689_71416721_71416836_71417701_71417790_71418805_71418845_71418938_71419045_71424288_71424453_71427640_71427678_71429533_71429608_71433070
ENSMUSG00000024049.16_71399147_71433173_1	chr17	+	1518	15	NNC	ENSMUSG00000024049.16	novel	4378	34	NA	NA	57577	-191	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGCCGGGAAAACCGCC	NA	NA	NA	NA	NA	NA	NA	NA	71399146	71433173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457_71412595_71413198_71413344_71415295_71415356_71415620_71415689_71416721_71416836_71417701_71417790_71418805_71418845_71418938_71419045_71424288_71424453_71429485_71429608_71433070
ENSMUSG00000024050.19_32575568_32576056_1	chr17	-	219	2	ISM	ENSMUSG00000024050.19	ENST00000389282.8	3642	7	5849	2713	5849	-1570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGATGCCTCTGCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	32576056	32575567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_32575593_32575862
ENSMUSG00000024050.19_32578281_32580468_1	chr17	-	222	2	ISM	ENSMUSG00000024050.19	ENST00000389282.8	3642	7	1437	5426	1437	-4283	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGACACCTCCACCCACC	NA	NA	NA	NA	NA	NA	NA	NA	32580468	32578280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_32578469_32580434
ENSMUSG00000024053.12_71559169_71581242_1	chr17	-	1775	5	ISM	ENSMUSG00000024053.12	ENST00000254528.4	3191	8	36557	-10	36557	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCCTTTTCTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	71581242	71559168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71559201_71559690_71560089_71562113_71562285_71563318_71563619_71580368
ENSMUSG00000024053.12_71559502_71617954_1	chr17	-	3570	8	FSM	ENSMUSG00000024053.12	ENSMUST00000024849.11	3906	8	2	334	0	-323	multi-exon	FALSE	canonical	NA	NA	NA	NA	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGAAGTTCTTGGGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	71617954	71559501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_71560089_71562113_71562243_71562974_71563008_71563318_71563685_71580368_71582283_71587668_71587845_71617143_71617267_71617712
ENSMUSG00000024053.12_71559561_71617954_1	chr17	-	3511	8	FSM	ENSMUSG00000024053.12	ENSMUST00000024849.11	3906	8	2	393	0	-382	multi-exon	FALSE	canonical	NA	NA	NA	NA	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTATGTCCCCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	71617954	71559560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_71560089_71562113_71562243_71562974_71563008_71563318_71563685_71580368_71582283_71587668_71587845_71617143_71617267_71617712
ENSMUSG00000024053.12_71560012_71581588_1	chr17	-	1763	4	NNC	ENSMUSG00000024053.12	novel	3191	8	NA	NA	36211	-833	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTCCTGTCTGTCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	71581588	71560011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_71560089_71562113_71562285_71563318_71563614_71580368
ENSMUSG00000024053.12_71562118_71581630_1	chr17	-	1729	3	ISM	ENSMUSG00000024053.12	ENST00000254528.4	3191	8	36169	2939	36169	-2939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGTGAGTATCTACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	71581630	71562117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71562285_71563318_71563619_71580368
ENSMUSG00000024053.12_71562143_71581710_1	chr17	-	1784	3	ISM	ENSMUSG00000024053.12	ENST00000254528.4	3191	8	36089	2964	36089	-2964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATGGGGATGTATACAACC	NA	NA	NA	NA	NA	NA	NA	NA	71581710	71562142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71562285_71563318_71563619_71580368
ENSMUSG00000024053.12_71562214_71581753_1	chr17	-	1756	3	ISM	ENSMUSG00000024053.12	ENST00000254528.4	3191	8	36046	3035	36046	-3035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCCGGTCTTACCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	71581753	71562213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71562285_71563318_71563619_71580368
ENSMUSG00000024053.12_71563361_71581882_1	chr17	-	1772	2	ISM	ENSMUSG00000024053.12	ENST00000254528.4	3191	8	35917	4182	35917	-4182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGCCCATTCATAGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	71581882	71563360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71563619_71580368
ENSMUSG00000024053.12_71563534_71582029_1	chr17	-	1746	2	ISM	ENSMUSG00000024053.12	ENST00000254528.4	3191	8	35770	4355	35770	-4355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGAGGCCCCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	71582029	71563533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71563619_71580368
ENSMUSG00000024053.12_71580627_71587778_1	chr17	-	1766	2	ISM	ENSMUSG00000024053.12	ENST00000254528.4	3191	8	30021	21448	30021	-21448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATCGAGGGCAGGGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	71587778	71580626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71582283_71587668
ENSMUSG00000024053.12_71580681_71587829_1	chr17	-	1763	2	ISM	ENSMUSG00000024053.12	ENST00000254528.4	3191	8	29970	21502	29970	-21502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCTAGACACGTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	71587829	71580680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71582283_71587668
ENSMUSG00000024056.11_71803315_71807296_1	chr17	-	167	3	ISM	ENSMUSG00000024056.11	ENSMUST00000024851.10	2201	17	26556	220	26506	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTATGAAGAATTCATG	NA	NA	NA	NA	NA	NA	NA	NA	71807296	71803314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71803349_71806261_71806365_71807266
ENSMUSG00000024056.11_71807357_71811804_1	chr17	-	178	3	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	21998	4223	21998	-4223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCTGGAGAAACACAAGC	NA	NA	NA	NA	NA	NA	NA	NA	71811804	71807356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71807398_71808503_71808597_71811760
ENSMUSG00000024056.11_71811786_71814349_1	chr17	-	160	2	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	19453	8652	19453	-8652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGGAGGATACTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	71814349	71811785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71811851_71814254
ENSMUSG00000024056.11_71814309_71815639_1	chr17	-	176	2	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	18163	11175	18163	-11175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATCCTGAGGCGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	71815639	71814308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71814408_71815562
ENSMUSG00000024056.11_71819453_71824562_1	chr17	-	160	3	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	9240	16319	9240	-16319	internal_fragment	TRUE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAGAAAACAAAGCACTA	NA	NA	NA	NA	NA	NA	NA	NA	71824562	71819452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71819495_71821183_71821278_71824538
ENSMUSG00000024056.11_71824539_71825809_1	chr17	-	167	2	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	7993	21405	7993	-21405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATACTATATGTTACCATA	NA	NA	NA	NA	NA	NA	NA	NA	71825809	71824538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71824629_71825732
ENSMUSG00000024056.11_71825769_71827846_1	chr17	-	159	2	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	5956	22635	5956	-22635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGCCTTGGTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	71827846	71825768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71825836_71827754
ENSMUSG00000024056.11_71825819_71827900_1	chr17	-	163	2	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	5902	22685	5902	-22685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGAGCTCCATGTATACA	NA	NA	NA	NA	NA	NA	NA	NA	71827900	71825818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71825836_71827754
ENSMUSG00000024063.14_73225300_73246955_1	chr17	+	1082	3	FSM	ENSMUSG00000024063.14	ENSMUST00000024857.14	3069	3	0	1987	0	-1987	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGGCATCTGACAACCA	NA	NA	NA	NA	NA	NA	NA	NA	73225299	73246955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_73225574_73228182_73228286_73246250
ENSMUSG00000024063.14_73225484_73247111_1	chr17	+	1054	3	FSM	ENSMUSG00000024063.14	ENSMUST00000024857.14	3069	3	184	1831	184	-1831	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCACCACCATTCCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	73225483	73247111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_73225574_73228182_73228286_73246250
ENSMUSG00000024063.14_73228183_73247212_1	chr17	+	1065	2	ISM	ENSMUSG00000024063.14	ENSMUST00000024857.14	3069	3	2883	1730	2883	-1730	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCCTCCCAGTATATAA	NA	NA	NA	NA	NA	NA	NA	NA	73228182	73247212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_73228286_73246250
ENSMUSG00000024066.10_74193338_74217282_1	chr17	-	1978	17	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	39817	0	39817	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGATACTTGGACAAATT	NA	NA	NA	NA	NA	NA	NA	NA	74217282	74193337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74193515_74198105_74198295_74199713_74199780_74200594_74200710_74202738_74202792_74204001_74204077_74204676_74204806_74205310_74205407_74205955_74206038_74207256_74207403_74207526_74207719_74213004_74213092_74213198_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160
ENSMUSG00000024066.10_74193492_74219464_1	chr17	-	1875	18	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	37635	154	37635	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTTCTTCGATCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	74219464	74193491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74193515_74198105_74198295_74199713_74199780_74200594_74200710_74202738_74202792_74204001_74204077_74204676_74204806_74205310_74205407_74205955_74206038_74207256_74207403_74207526_74207719_74213004_74213092_74213198_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411
ENSMUSG00000024066.10_74198222_74220961_1	chr17	-	1903	18	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	36138	4884	36138	-4884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACACTCGTGGCCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	74220961	74198221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74198295_74199713_74199780_74200594_74200710_74202738_74202792_74204001_74204077_74204676_74204806_74205310_74205407_74205955_74206038_74207256_74207403_74207526_74207719_74213004_74213092_74213198_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865
ENSMUSG00000024066.10_74199711_74222755_1	chr17	-	1991	18	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	34344	6373	34344	-6373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTATGGGAGATCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	74222755	74199710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74199780_74200594_74200710_74202738_74202792_74204001_74204077_74204676_74204806_74205310_74205407_74205955_74206038_74207256_74207403_74207526_74207719_74213004_74213092_74213198_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671
ENSMUSG00000024066.10_74200670_74223826_1	chr17	-	1891	18	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	33273	7332	33273	-7332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCTTCCACTACTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	74223826	74200669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74200710_74202738_74202792_74204001_74204077_74204676_74204806_74205310_74205407_74205955_74206038_74207256_74207403_74207526_74207719_74213004_74213092_74213198_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782
ENSMUSG00000024066.10_74202738_74223961_1	chr17	-	1987	17	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	33138	9400	33138	-9400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTATGATCCTCATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	74223961	74202737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74202792_74204001_74204077_74204676_74204806_74205310_74205407_74205955_74206038_74207256_74207403_74207526_74207719_74213004_74213092_74213198_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782
ENSMUSG00000024066.10_74204680_74225400_1	chr17	-	1884	16	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	31699	11342	31699	-11342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAAGTGAGGAGTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	74225400	74204679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74204806_74205310_74205407_74205955_74206038_74207256_74207403_74207526_74207719_74213004_74213092_74213198_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782_74223958_74225367
ENSMUSG00000024066.10_74204723_74225459_1	chr17	-	1900	16	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	31640	11385	31640	-11385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTGCCTCTGCCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	74225459	74204722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74204806_74205310_74205407_74205955_74206038_74207256_74207403_74207526_74207719_74213004_74213092_74213198_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782_74223958_74225367
ENSMUSG00000024066.10_74204783_74225505_1	chr17	-	1886	16	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	31594	11445	31594	-11445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCACTTCCAAGATCCATA	NA	NA	NA	NA	NA	NA	NA	NA	74225505	74204782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74204806_74205310_74205407_74205955_74206038_74207256_74207403_74207526_74207719_74213004_74213092_74213198_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782_74223958_74225367
ENSMUSG00000024066.10_74205346_74227478_1	chr17	-	1966	16	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	29621	12008	29621	-12008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGTCAAGGCCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	74227478	74205345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74205407_74205955_74206038_74207256_74207403_74207526_74207719_74213004_74213092_74213198_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782_74223958_74225367_74225553_74227387
ENSMUSG00000024066.10_74207351_74229459_1	chr17	-	1894	16	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	27640	14013	27640	-14013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGAGGGGTTCACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	74229459	74207350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74207403_74207526_74207719_74213004_74213092_74213198_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782_74223958_74225367_74225553_74227387_74227498_74228261_74228356_74229407
ENSMUSG00000024066.10_74207369_74229558_1	chr17	-	1975	16	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	27541	14031	27541	-14031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCACTTCAACCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	74229558	74207368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74207403_74207526_74207719_74213004_74213092_74213198_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782_74223958_74225367_74225553_74227387_74227498_74228261_74228356_74229407
ENSMUSG00000024066.10_74207620_74230132_1	chr17	-	1944	16	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	26967	14282	26967	-14282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCAGAGGCTTTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	74230132	74207619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74207719_74213004_74213092_74213198_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782_74223958_74225367_74225553_74227387_74227498_74228261_74228356_74229407_74229560_74230037
ENSMUSG00000024066.10_74213001_74232052_1	chr17	-	1990	16	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	25047	19663	25047	-19663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTATCTGCCTGCCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	74232052	74213000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74213092_74213198_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782_74223958_74225367_74225553_74227387_74227498_74228261_74228356_74229407_74229560_74230037_74230131_74231909
ENSMUSG00000024066.10_74213196_74233256_1	chr17	-	1989	16	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	23843	19858	23843	-19858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATCTGTTCTGTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	74233256	74213195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782_74223958_74225367_74225553_74227387_74227498_74228261_74228356_74229407_74229560_74230037_74230131_74231909_74232052_74233168
ENSMUSG00000024066.10_74213689_74233613_1	chr17	-	1969	16	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	23486	20351	23486	-20351	internal_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTCTAGGCCCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	74233613	74213688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782_74223958_74225367_74225553_74227387_74227498_74228261_74228356_74229407_74229560_74230037_74230131_74231909_74232052_74233168_74233256_74233542
ENSMUSG00000024066.10_74213802_74241850_1	chr17	-	1908	17	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	15249	20464	15249	-20464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTCCAGACAACAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	74241850	74213801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782_74223958_74225367_74225553_74227387_74227498_74228261_74228356_74229407_74229560_74230037_74230131_74231909_74232052_74233168_74233256_74233542_74233612_74241796
ENSMUSG00000024066.10_74216236_74246856_1	chr17	-	2003	17	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	10243	22898	10243	-22898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCACCAAGCAGCAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	74246856	74216235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782_74223958_74225367_74225553_74227387_74227498_74228261_74228356_74229407_74229560_74230037_74230131_74231909_74232052_74233168_74233256_74233542_74233612_74241796_74241859_74242866_74242994_74246750
ENSMUSG00000024066.10_74217160_74248133_1	chr17	-	1998	17	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	8966	23822	8966	-23822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGAGAAATGGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	74248133	74217159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782_74223958_74225367_74225553_74227387_74227498_74228261_74228356_74229407_74229560_74230037_74230131_74231909_74232052_74233168_74233256_74233542_74233612_74241796_74241859_74242866_74242994_74246750_74246857_74248036
ENSMUSG00000024066.10_74219410_74250899_1	chr17	-	1937	17	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	6200	26072	6200	-26072	internal_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGGATGTGTCATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	74250899	74219409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_74219536_74220865_74221036_74222671_74222756_74223782_74223958_74225367_74225553_74227387_74227498_74228261_74228356_74229407_74229560_74230037_74230131_74231909_74232052_74233168_74233256_74233542_74233612_74241796_74241859_74242866_74242994_74246750_74246857_74248036_74248134_74250841
ENSMUSG00000024068.9_74646131_74696840_1	chr17	+	3180	16	FSM	ENSMUSG00000024068.9	ENSMUST00000233611.2	1746	16	99	-1533	-33	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTAGGATCATATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	74646130	74696840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ENSMUSG00000024068.9_74646131_74696840_2	chr17	+	3174	16	NNC	ENSMUSG00000024068.9	novel	3150	16	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTAGGATCATATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	74646130	74696840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_74646441_74658947_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680663_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ENSMUSG00000024068.9_74646131_74696840_3	chr17	+	3175	16	NNC	ENSMUSG00000024068.9	novel	3150	16	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTAGGATCATATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	74646130	74696840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_74646441_74658947_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695189
ENSMUSG00000024068.9_74646131_74696840_4	chr17	+	3175	16	NNC	ENSMUSG00000024068.9	novel	3150	16	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTAGGATCATATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	74646130	74696840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_74646441_74658947_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684040_74684116_74688964_74689036_74694028_74694070_74695184
ENSMUSG00000024068.9_74646131_74696840_5	chr17	+	3175	16	NNC	ENSMUSG00000024068.9	novel	3150	16	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTAGGATCATATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	74646130	74696840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_74646441_74658944_74659032_74663088_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ENSMUSG00000024069.15_74708907_74730068_1	chr17	+	870	12	FSM	ENSMUSG00000024069.15	ENST00000435660.5	1521	12	1	650	1	-650	multi-exon	TRUE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAGCAACAGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	74708906	74730068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74730011
ENSMUSG00000024069.15_74708907_74730162_1	chr17	+	1033	13	ISM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	6304	1054	1	-556	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCGCCCAACGTCCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	74708906	74730162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ENSMUSG00000024069.15_74715865_74730398_1	chr17	+	964	9	ISM	ENSMUSG00000024069.15	ENSMUST00000179074.9	1938	14	13249	606	6959	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGGACTCGCATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	74715864	74730398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ENSMUSG00000024069.15_74716346_74730374_1	chr17	+	816	7	ISM	ENSMUSG00000024069.15	ENST00000435660.5	1521	12	7440	344	7440	-344	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACACCATACAGCAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	74716345	74730374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74730011
ENSMUSG00000024069.15_74717351_74730436_1	chr17	+	811	6	NNC	ENSMUSG00000024069.15	novel	1521	12	NA	NA	8445	-282	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTGAGGCCCACCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	74717350	74730436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_74717424_74719275_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74730011
ENSMUSG00000024069.15_74717389_74730507_1	chr17	+	851	6	ISM	ENSMUSG00000024069.15	ENST00000435660.5	1521	12	8483	211	8483	-211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGACTCTAACTTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	74717388	74730507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74730011
ENSMUSG00000024069.15_74719636_74730661_1	chr17	+	887	4	ISM	ENSMUSG00000024069.15	ENST00000435660.5	1521	12	10730	57	10730	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCTTGTGGCAGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	74719635	74730661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_74719722_74722614_74722718_74725614_74725663_74730011
ENSMUSG00000024069.15_74719678_74730661_1	chr17	+	845	4	ISM	ENSMUSG00000024069.15	ENST00000435660.5	1521	12	10772	57	10772	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCTTGTGGCAGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	74719677	74730661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_74719722_74722614_74722718_74725614_74725663_74730011
ENSMUSG00000024069.15_74722615_74730830_1	chr17	+	1039	4	ISM	ENSMUSG00000024069.15	ENSMUST00000179074.9	1938	14	19999	174	13709	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCAGTAGAATTTATAAAC	NA	NA	NA	NA	NA	NA	NA	NA	74722614	74730830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_74722718_74725614_74725663_74726526_74726596_74730011
ENSMUSG00000024072.10_74796488_74807281_1	chr17	+	2135	6	NNC	ENSMUSG00000024072.10	novel	2133	6	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACAGGTAAAAGCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	74796487	74807281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_74796790_74799340_74799501_74800922_74801088_74803584_74803663_74805303_74805418_74805965
ENSMUSG00000024072.10_74796488_74807281_2	chr17	+	2134	6	NNC	ENSMUSG00000024072.10	novel	2133	6	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACAGGTAAAAGCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	74796487	74807281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803655_74805303_74805418_74805965
ENSMUSG00000024072.10_74796488_74807281_3	chr17	+	2135	6	NNC	ENSMUSG00000024072.10	novel	2133	6	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACAGGTAAAAGCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	74796487	74807281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_74796790_74799347_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
ENSMUSG00000024076.11_78815601_78927046_1	chr17	+	1095	9	ISM	ENSMUSG00000024076.11	ENST00000404084.5	2057	12	-1	7306	0	-7306	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTATAGAGAAAATTACCCA	NA	NA	NA	NA	NA	NA	NA	NA	78815600	78927046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_78815755_78842043_78842114_78873443_78873601_78881513_78881648_78886782_78886861_78894086_78894298_78909253_78909336_78912849_78912998_78926985
ENSMUSG00000024076.11_78815601_78934352_1	chr17	+	2137	14	FSM	ENSMUSG00000024076.11	ENST00000379241.7	2096	14	-41	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGGACCAGACAGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	78815600	78934352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_78815755_78842043_78842114_78853807_78853874_78873443_78873601_78881513_78881648_78886782_78886861_78894086_78894273_78900669_78900727_78909272_78909336_78912849_78912998_78926985_78927090_78930069_78930297_78932154_78932669_78934173
ENSMUSG00000024076.11_78815601_78934352_2	chr17	+	2131	14	NNC	ENSMUSG00000024076.11	novel	2096	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGGACCAGACAGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	78815600	78934352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_78815755_78842043_78842114_78853807_78853874_78873443_78873601_78881513_78881648_78886782_78886861_78894086_78894273_78900669_78900721_78909272_78909336_78912849_78912998_78926985_78927090_78930069_78930297_78932154_78932669_78934173
ENSMUSG00000024076.11_78815601_78934352_3	chr17	+	2132	14	NNC	ENSMUSG00000024076.11	novel	2096	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGGACCAGACAGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	78815600	78934352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_78815755_78842043_78842114_78853807_78853874_78873443_78873601_78881513_78881648_78886782_78886861_78894091_78894273_78900669_78900727_78909272_78909336_78912849_78912998_78926985_78927090_78930069_78930297_78932154_78932669_78934173
ENSMUSG00000024076.11_78815601_78934352_4	chr17	+	2135	14	NNC	ENSMUSG00000024076.11	novel	2096	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGGACCAGACAGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	78815600	78934352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_78815755_78842043_78842114_78853807_78853874_78873443_78873601_78881513_78881648_78886782_78886861_78894086_78894273_78900669_78900727_78909272_78909336_78912849_78912998_78926987_78927090_78930069_78930297_78932154_78932669_78934173
ENSMUSG00000024076.11_78842063_78930129_1	chr17	+	1025	9	ISM	ENSMUSG00000024076.11	ENST00000404084.5	2057	12	26461	4223	26421	-4223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCCCAATGTGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	78842062	78930129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_78842114_78873443_78873601_78881513_78881648_78886782_78886861_78894086_78894298_78909253_78909336_78912849_78912998_78926985_78927090_78930069
ENSMUSG00000024076.11_78873443_78930297_1	chr17	+	1143	8	ISM	ENSMUSG00000024076.11	ENST00000404084.5	2057	12	57841	4055	57801	-4055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTAACCCGTCCAGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	78873442	78930297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_78873601_78881513_78881648_78886782_78886861_78894086_78894298_78909253_78909336_78912849_78912998_78926985_78927090_78930069
ENSMUSG00000024076.11_78881520_78932220_1	chr17	+	1044	8	ISM	ENSMUSG00000024076.11	ENST00000404084.5	2057	12	65918	2132	65878	-2132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGCCCCTGGTGAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	78881519	78932220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_78881648_78886782_78886861_78894086_78894298_78909253_78909336_78912849_78912998_78926985_78927090_78930069_78930297_78932154
ENSMUSG00000024076.11_78881585_78932272_1	chr17	+	1031	8	ISM	ENSMUSG00000024076.11	ENST00000404084.5	2057	12	65983	2080	65943	-2080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGTTTAAACTCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	78881584	78932272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_78881648_78886782_78886861_78894086_78894298_78909253_78909336_78912849_78912998_78926985_78927090_78930069_78930297_78932154
ENSMUSG00000024076.11_78881618_78932346_1	chr17	+	1072	8	ISM	ENSMUSG00000024076.11	ENST00000404084.5	2057	12	66016	2006	65976	-2006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGTCCTGCAGTTCGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	78881617	78932346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_78881648_78886782_78886861_78894086_78894298_78909253_78909336_78912849_78912998_78926985_78927090_78930069_78930297_78932154
ENSMUSG00000024076.11_78886781_78932402_1	chr17	+	1104	7	NNC	ENSMUSG00000024076.11	novel	2057	12	NA	NA	71139	-1950	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACGCGTCGGGGCCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	78886780	78932402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_78886865_78894086_78894298_78909253_78909336_78912849_78912998_78926985_78927090_78930069_78930297_78932154
ENSMUSG00000024076.11_78894182_78932525_1	chr17	+	1048	6	ISM	ENSMUSG00000024076.11	ENST00000404084.5	2057	12	78580	1827	78540	-1827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACAGGGGCTGCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	78894181	78932525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_78894298_78909253_78909336_78912849_78912998_78926985_78927090_78930069_78930297_78932154
ENSMUSG00000024076.11_78894226_78932585_1	chr17	+	1064	6	ISM	ENSMUSG00000024076.11	ENST00000404084.5	2057	12	78624	1767	78584	-1767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAGGAAGGTAATGATCA	NA	NA	NA	NA	NA	NA	NA	NA	78894225	78932585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_78894298_78909253_78909336_78912849_78912998_78926985_78927090_78930069_78930297_78932154
ENSMUSG00000024077.16_78963048_78965374_1	chr17	-	298	4	ISM	ENSMUSG00000024077.16	ENSMUST00000024881.14	2967	16	30872	1023	30872	-178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTATCCAGGAGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	78965374	78963047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_78963089_78963177_78963265_78964336_78964445_78965312
ENSMUSG00000024077.16_78964385_78967561_1	chr17	-	290	3	ISM	ENSMUSG00000024077.16	ENSMUST00000024881.14	2967	16	28685	2360	28685	-1515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGCTCATGAAGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	78967561	78964384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_78964445_78965312_78965454_78967472
ENSMUSG00000024077.16_78967588_78972108_1	chr17	-	284	4	ISM	ENSMUSG00000024077.16	ENSMUST00000024881.14	2967	16	24138	5563	24138	-4718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTACAGTGCGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	78972108	78967587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_78967641_78969190_78969313_78970489_78970538_78972047
ENSMUSG00000024077.16_78972151_78977262_1	chr17	-	293	3	ISM	ENSMUSG00000024077.16	ENSMUST00000024881.14	2967	16	18984	10126	18984	-9281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGAGCCCTTGCTTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	78977262	78972150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_78972224_78974550_78974688_78977179
ENSMUSG00000024077.16_78977261_78990339_1	chr17	-	282	3	ISM	ENSMUSG00000024077.16	ENST00000379213.3	2289	17	53585	14391	5907	-14391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCAGCCATCTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	78990339	78977260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_78977324_78984710_78984847_78990256
ENSMUSG00000024077.16_78991765_79008337_1	chr17	-	274	4	ISM	ENSMUSG00000024077.16	ENST00000379213.3	2289	17	35587	28895	-12091	-28895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTGGGCTTTTCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	79008337	78991764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_78991827_78995020_78995100_78999822_78999897_79008278
ENSMUSG00000024077.16_78995046_79043754_1	chr17	-	304	4	ISM	ENSMUSG00000024077.16	ENST00000379213.3	2289	17	170	32176	170	-32176	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGGCCGGCAGCTACTC	NA	NA	NA	NA	NA	NA	NA	NA	79043754	78995045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_78995100_78999822_78999897_79008278_79008383_79043682
ENSMUSG00000024081.10_79227053_79229603_1	chr17	-	667	5	ISM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	14892	618	14892	-618	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGACCTCTGTGATGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	79229603	79227052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558
ENSMUSG00000024081.10_79227127_79229654_1	chr17	-	644	5	ISM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	14841	692	14841	-692	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCCATATTGCTACAT	NA	NA	NA	NA	NA	NA	NA	NA	79229654	79227126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558
ENSMUSG00000024081.10_79229608_79236756_1	chr17	-	638	8	ISM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	7739	3173	7739	-3173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAACGTTCATGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	79236756	79229607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706
ENSMUSG00000024081.10_79238839_79242344_1	chr17	-	660	3	ISM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	2151	12404	2151	-12404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTAAAGGAAGTAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	79242344	79238838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79238926_79239538_79239771_79242003
ENSMUSG00000024081.10_79239662_79242530_1	chr17	-	636	2	ISM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	1965	13227	1965	-13227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGAGGTTGCTTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	79242530	79239661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79239771_79242003
ENSMUSG00000024082.6_79244969_79249593_1	chr17	+	403	4	ISM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	404	5335	403	-5335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGAGGAGAAGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	79244968	79249593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_79245084_79245969_79246051_79247023_79247135_79249497
ENSMUSG00000024082.6_79249528_79252413_1	chr17	+	398	4	ISM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	4963	2515	4962	-2515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTATCATCCAAGAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	79249527	79252413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_79249712_79250681_79250741_79251262_79251374_79252369
ENSMUSG00000024082.6_79251329_79254345_1	chr17	+	405	4	ISM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	6764	583	6763	-583	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTGGAGGGTATGATAT	NA	NA	NA	NA	NA	NA	NA	NA	79251328	79254345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_79251374_79252369_79252514_79253724_79253899_79254303
ENSMUSG00000024082.6_79252456_79254499_1	chr17	+	428	3	ISM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	7891	429	7890	-429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACTTGTTTGGCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	79252455	79254499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_79252514_79253724_79253899_79254303
ENSMUSG00000024083.17_64589236_64594557_1	chr17	-	1455	3	ISM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	25469	1235	25469	-1221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAACATAACACTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	64594557	64589235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64590534_64593995_64594118_64594522
ENSMUSG00000024083.17_64589351_64596954_1	chr17	-	1447	4	ISM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	23072	1350	23072	-1336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGTTTCATTTAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	64596954	64589350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927
ENSMUSG00000024083.17_64589466_64599877_1	chr17	-	1461	5	ISM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	20149	1465	20149	-1451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGAGTGAAACCAGACATC	NA	NA	NA	NA	NA	NA	NA	NA	64599877	64589465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833
ENSMUSG00000024083.17_64589605_64599970_1	chr17	-	1415	5	ISM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	20056	1604	20056	-1590	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGGTTCTACTTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	64599970	64589604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833
ENSMUSG00000024083.17_64589743_64604904_1	chr17	-	1512	6	ISM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	15122	1742	15122	-1728	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCACAGTTCATGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	64604904	64589742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718
ENSMUSG00000024083.17_64589743_64615737_1	chr17	-	1447	6	ISM	ENSMUSG00000024083.17	ENSMUST00000024889.14	4345	8	4289	1742	4289	-1728	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCACAGTTCATGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	64615737	64589742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64615616
ENSMUSG00000024083.17_64589933_64615736_1	chr17	-	1442	7	ISM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	4290	1932	4290	-1918	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGGAGCTTTTCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	64615736	64589932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616
ENSMUSG00000024083.17_64590014_64616022_1	chr17	-	1461	6	ISM	ENSMUSG00000024083.17	ENSMUST00000024889.14	4345	8	4004	2013	4004	-1999	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAAGCATGCTTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	64616022	64590013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64615616
ENSMUSG00000024083.17_64590173_64615953_1	chr17	-	1419	7	ISM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	4073	2172	4073	-2158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTGACGTCAGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	64615953	64590172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616
ENSMUSG00000024083.17_64590253_64616258_1	chr17	-	1458	6	ISM	ENSMUSG00000024083.17	ENSMUST00000024889.14	4345	8	3768	2252	3768	-2238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGGTTTGCAGAACACAC	NA	NA	NA	NA	NA	NA	NA	NA	64616258	64590252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64615616
ENSMUSG00000024083.17_64590360_64616137_1	chr17	-	1416	7	ISM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	3889	2359	3889	-2345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCTAAATCTGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	64616137	64590359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616
ENSMUSG00000024083.17_64593996_64616272_1	chr17	-	1377	6	ISM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	3754	5995	3754	-5981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTTCAAGAGGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	64616272	64593995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616
ENSMUSG00000024083.17_64594023_64616358_1	chr17	-	1436	6	ISM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	3668	6022	3668	-6008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTCTCCATCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	64616358	64594022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616
ENSMUSG00000024083.17_64594623_64616541_1	chr17	-	1424	5	ISM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	3485	6622	3485	-6608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAGTCCCTTGCAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	64616541	64594622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616
ENSMUSG00000024083.17_64596977_64618320_1	chr17	-	1449	4	ISM	ENSMUSG00000024083.17	ENSMUST00000024889.14	4345	8	1706	8976	1706	-8962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTTACCTACATGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	64618320	64596976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64597040_64599833_64600020_64615616_64616662_64618165
ENSMUSG00000024083.17_64597011_64616652_1	chr17	-	1437	4	ISM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	3374	9010	3374	-8996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGAAGCTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	64616652	64597010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64597040_64599833_64600020_64604718_64604905_64615616
ENSMUSG00000024083.17_64599925_64618257_1	chr17	-	1418	4	ISM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	1769	11924	1769	-11910	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCACAGCCGGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	64618257	64599924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64600020_64604718_64604905_64615616_64616662_64618165
ENSMUSG00000024083.17_64599983_64618316_1	chr17	-	1419	4	ISM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	1710	11982	1710	-11968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGTACAATGAGGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	64618316	64599982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64600020_64604718_64604905_64615616_64616662_64618165
ENSMUSG00000024083.17_64604797_64620078_1	chr17	-	1437	4	ISM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	-52	16796	-52	-16782	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGAGAATGACCCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	64620078	64604796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_64604905_64615616_64616662_64618165_64618367_64619995
ENSMUSG00000024084.9_79359617_79397650_1	chr17	+	1620	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	282	157	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAATTTATTTTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	79359616	79397650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
ENSMUSG00000024084.9_79359749_79397809_1	chr17	+	1647	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	414	-2	132	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATAACTATTGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	79359748	79397809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
ENSMUSG00000024087.5_80017545_80021311_1	chr17	-	1180	2	ISM	ENSMUSG00000024087.5	ENSMUST00000024894.2	5128	3	1159	3163	1159	-3163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAGGAAGGCTGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	80021311	80017544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_80018111_80020697
ENSMUSG00000024091.10_65886575_65889749_1	chr17	-	1436	2	NNC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	30801	-1253	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGGGTCTCCAGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	65889749	65886574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_65887836_65889574
ENSMUSG00000024091.10_65886781_65900509_1	chr17	-	1385	4	NNC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	20041	-1459	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGGCTGTATAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	65900509	65886780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_65887836_65889574_65889749_65899285_65899367_65900434
ENSMUSG00000024091.10_65886858_65901970_1	chr17	-	1418	5	ISM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	18580	1536	18580	-1536	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCCCTGAACTCAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	65901970	65886857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896
ENSMUSG00000024091.10_65886937_65902021_1	chr17	-	1383	5	NNC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	18529	-1615	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTTTGGTTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65902021	65886936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_65887843_65889574_65889749_65899285_65899360_65900434_65900539_65901896
ENSMUSG00000024091.10_65886984_65920297_1	chr17	-	1454	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	253	1662	253	-1662	multi-exon	FALSE	canonical	NA	NA	NA	NA	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTCACTCTGCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	65920297	65886983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ENSMUSG00000024091.10_65887153_65920413_1	chr17	-	1394	6	NNC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	137	-1831	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTGTGAGGCAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	65920413	65887152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901903_65902050_65920214
ENSMUSG00000024095.16_80336916_80361071_1	chr17	-	2440	12	NNC	ENSMUSG00000024095.16	novel	3009	13	NA	NA	8585	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTAAGGCTGTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	80361071	80336915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356297_80357240_80357322_80358056_80358295_80360951
ENSMUSG00000024095.16_80337266_80369422_1	chr17	-	2426	13	NNC	ENSMUSG00000024095.16	novel	3009	13	NA	NA	234	-350	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTTCATCTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	80369422	80337265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356297_80357240_80357322_80358056_80358295_80360951_80361071_80369085
ENSMUSG00000024095.16_80337266_80369564_1	chr17	-	2568	13	NNC	ENSMUSG00000024095.16	novel	3009	13	NA	NA	92	-350	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTTCATCTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	80369564	80337265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356297_80357240_80357322_80358056_80358295_80360951_80361071_80369085
ENSMUSG00000024095.16_80337505_80369672_1	chr17	-	2437	13	NNC	ENSMUSG00000024095.16	novel	3116	13	NA	NA	-16	-589	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAAATATAATTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	80369672	80337504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356297_80357240_80357322_80358056_80358295_80360951_80361071_80369085
ENSMUSG00000024096.18_66156415_66159806_1	chr17	-	1022	3	ISM	ENSMUSG00000024096.18	ENSMUST00000233054.2	2370	8	15019	0	15019	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCCGAGTTGGGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	66159806	66156414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66157191_66159114_66159239_66159684
ENSMUSG00000024096.18_66156415_66192325_1	chr17	-	2677	10	FSM	ENSMUSG00000024096.18	ENSMUST00000166543.10	3799	10	468	654	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCCGAGTTGGGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	66192325	66156414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
ENSMUSG00000024096.18_66156825_66166134_1	chr17	-	1019	6	ISM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	25815	1412	8691	-410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAGGGCCTGGGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	66166134	66156824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967
ENSMUSG00000024096.18_66159115_66171284_1	chr17	-	1014	7	ISM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	20665	3702	3541	-2700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGGGGACAGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66171284	66159114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268
ENSMUSG00000024096.18_66166071_66174666_1	chr17	-	1008	4	ISM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	17283	10658	159	-9656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTCCTGAAGCAAGTAACAA	NA	NA	NA	NA	NA	NA	NA	NA	66174666	66166070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66166130_66168250_66168601_66171268_66171728_66174526
ENSMUSG00000024096.18_66166108_66174825_1	chr17	-	1130	4	ISM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	17124	10695	0	-9693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTCACACATGTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	66174825	66166107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66166130_66168250_66168601_66171268_66171728_66174526
ENSMUSG00000024096.18_66168396_66192209_1	chr17	-	992	4	ISM	ENSMUSG00000024096.18	ENSMUST00000166543.10	3799	10	584	12635	133	-11981	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCGCTTGCTCCGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	66192209	66168395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66168601_66171268_66171728_66174526_66174826_66192180
ENSMUSG00000024096.18_66168458_66191773_1	chr17	-	1002	4	ISM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	176	13045	176	-12043	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGCCCCGGTTTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	66191773	66168457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66168601_66171268_66171728_66174526_66174826_66191672
ENSMUSG00000024096.18_66168543_66191949_1	chr17	-	1093	4	ISM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	0	13130	0	-12128	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAGAAGAATATGAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	66191949	66168542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66168601_66171268_66171728_66174526_66174826_66191672
ENSMUSG00000024097.12_80508475_80511767_1	chr17	-	748	4	ISM	ENSMUSG00000024097.12	ENST00000446327.6	2386	7	3101	966	2519	264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTGGTGTTAACAATT	NA	NA	NA	NA	NA	NA	NA	NA	80511767	80508474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_80509032_80510119_80510174_80511550_80511662_80511741
ENSMUSG00000024097.12_80508549_80511801_1	chr17	-	708	4	ISM	ENSMUSG00000024097.12	ENST00000446327.6	2386	7	3067	1040	2485	190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTACCTTTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	80511801	80508548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_80509032_80510119_80510174_80511550_80511662_80511741
ENSMUSG00000024097.12_80508618_80511629_1	chr17	-	583	4	ISM	ENSMUSG00000024097.12	ENSMUST00000234095.2	2403	8	2657	1064	2657	121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAACATCATTAACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	80511629	80508617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550
ENSMUSG00000024097.12_80508629_80511822_1	chr17	-	649	4	ISM	ENSMUSG00000024097.12	ENST00000446327.6	2386	7	3046	1120	2464	110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGTGTTAGTTAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	80511822	80508628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_80509032_80510119_80510174_80511550_80511662_80511741
ENSMUSG00000024097.12_80508746_80512867_1	chr17	-	703	5	ISM	ENSMUSG00000024097.12	ENST00000446327.6	2386	7	2001	1237	1419	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGATGTTTTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80512867	80508745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_80509032_80510119_80510174_80511550_80511662_80511741_80511817_80512690
ENSMUSG00000024097.12_80508746_80514732_1	chr17	-	1038	7	NNC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGATGTTTTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80514732	80508745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_80509032_80510085_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUSG00000024097.12_80508746_80514732_2	chr17	-	1034	8	NNC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGATGTTTTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80514732	80508745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511656_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUSG00000024097.12_80508746_80514732_3	chr17	-	1027	7	NNC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGATGTTTTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80514732	80508745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_80509032_80510096_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUSG00000024097.12_80508950_80514732_1	chr17	-	809	7	FSM	ENSMUSG00000024097.12	ENST00000446327.6	2386	7	136	1441	0	-204	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATTTTGTTTACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	80514732	80508949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_80509032_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUSG00000024097.12_80508956_80513351_1	chr17	-	604	7	ISM	ENSMUSG00000024097.12	ENSMUST00000234095.2	2403	8	935	1402	935	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAAGTTATTTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	80513351	80508955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276
ENSMUSG00000024097.12_80511740_80514853_1	chr17	-	685	4	ISM	ENSMUSG00000024097.12	ENSMUST00000235069.2	1040	8	-121	2994	15	-2994	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAATTTGTAAAATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	80514853	80511739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUSG00000024099.16_66386111_66387858_1	chr17	-	525	2	ISM	ENSMUSG00000024099.16	ENSMUST00000024909.15	927	9	20632	-325	20632	325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTACTGAAGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	66387858	66386110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66386583_66387805
ENSMUSG00000024099.16_66386246_66390502_1	chr17	-	524	3	ISM	ENSMUSG00000024099.16	ENSMUST00000024909.15	927	9	17988	-190	17988	190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGTGAAGTAAAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	66390502	66386245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66386583_66387805_66387883_66390392
ENSMUSG00000024099.16_66390392_66408490_1	chr17	-	607	6	ISM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	64	4759	0	-3956	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATCCATCCCACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	66408490	66390391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
ENSMUSG00000024101.16_66422680_66426131_1	chr17	+	1608	7	NNC	ENSMUSG00000024101.16	novel	1641	7	NA	NA	28	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTTGGCCATTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66422679	66426131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_66422778_66422948_66423096_66423260_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805
ENSMUSG00000024101.16_66422680_66426131_2	chr17	+	1614	7	FSM	ENSMUSG00000024101.16	ENST00000538033.2	1641	7	28	-1	28	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTTGGCCATTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66422679	66426131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_66422778_66422948_66423096_66423254_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805
ENSMUSG00000024101.16_66422680_66426131_3	chr17	+	1610	7	NNC	ENSMUSG00000024101.16	novel	1641	7	NA	NA	28	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTTGGCCATTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66422679	66426131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_66422778_66422948_66423096_66423254_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425809
ENSMUSG00000024101.16_66422695_66426131_1	chr17	+	1593	7	NNC	ENSMUSG00000024101.16	novel	1641	7	NA	NA	43	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTTGGCCATTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66422694	66426131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_66422778_66422948_66423096_66423254_66423757_66423967_66424170_66424264_66424439_66425057_66425217_66425805
ENSMUSG00000024101.16_66422695_66426131_2	chr17	+	1592	7	NNC	ENSMUSG00000024101.16	novel	1641	7	NA	NA	43	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTTGGCCATTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66422694	66426131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_66422778_66422948_66423096_66423254_66423757_66423974_66424170_66424258_66424439_66425057_66425217_66425805
ENSMUSG00000024107.8_89049455_89061357_1	chr17	-	1112	3	ISM	ENSMUSG00000024107.8	ENST00000403273.5	1808	11	38046	0	37948	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTACACCTCCAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	89061357	89049454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_89050300_89057530_89057612_89061171
ENSMUSG00000024107.8_89049502_89099264_1	chr17	-	1807	10	FSM	ENSMUSG00000024107.8	ENST00000405626.5	1945	10	41	97	41	-47	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCTTCCCAGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	89099264	89049501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_89050566_89061171_89061358_89062978_89063054_89065770_89065840_89072409_89072488_89072575_89072651_89074680_89074756_89077264_89077340_89079439_89079512_89099226
ENSMUSG00000024107.8_89049573_89065789_1	chr17	-	1088	5	ISM	ENSMUSG00000024107.8	ENST00000403273.5	1808	11	33614	118	33516	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTGAACTTTACAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	89065789	89049572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_89050300_89057530_89057612_89061171_89061358_89062978_89063054_89065770
ENSMUSG00000024107.8_89049865_89077285_1	chr17	-	1095	9	ISM	ENSMUSG00000024107.8	ENST00000403273.5	1808	11	22118	410	22020	-410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGCAGTTCAAAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	89077285	89049864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_89050300_89057530_89057612_89061171_89061358_89062978_89063054_89065770_89065840_89072409_89072488_89072575_89072651_89074680_89074756_89077264
ENSMUSG00000024107.8_89050050_89099245_1	chr17	-	1055	11	FSM	ENSMUSG00000024107.8	ENST00000403273.5	1808	11	158	595	60	-595	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGGATGGATTTTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	89099245	89050049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_89050300_89057530_89057612_89061171_89061358_89062978_89063054_89065770_89065840_89072409_89072488_89072575_89072651_89074680_89074756_89077264_89077340_89079439_89079512_89099226
ENSMUSG00000024107.8_89050101_89099297_1	chr17	-	1056	11	FSM	ENSMUSG00000024107.8	ENST00000403273.5	1808	11	106	646	8	-646	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCAGCTGGACCAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	89099297	89050100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_89050300_89057530_89057612_89061171_89061358_89062978_89063054_89065770_89065840_89072409_89072488_89072575_89072651_89074680_89074756_89077264_89077340_89079439_89079512_89099226
ENSMUSG00000024107.8_89050161_89099404_1	chr17	-	1103	11	FSM	ENSMUSG00000024107.8	ENST00000403273.5	1808	11	-1	706	0	-706	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTGTCTATACCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	89099404	89050160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_89050300_89057530_89057612_89061171_89061358_89062978_89063054_89065770_89065840_89072409_89072488_89072575_89072651_89074680_89074756_89077264_89077340_89079439_89079512_89099226
ENSMUSG00000024120.13_85012846_85018047_1	chr17	-	559	6	ISM	ENSMUSG00000024120.13	ENSMUST00000112308.9	4393	38	79939	171	62713	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAAGCAGCGCGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	85018047	85012845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962
ENSMUSG00000024120.13_85013420_85020212_1	chr17	-	558	6	ISM	ENSMUSG00000024120.13	ENSMUST00000112308.9	4393	38	77774	745	60548	-745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAGAACTTGAAGCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	85020212	85013419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120
ENSMUSG00000024120.13_85018043_85033801_1	chr17	-	549	5	ISM	ENSMUSG00000024120.13	ENSMUST00000112308.9	4393	38	64185	5368	46959	-5368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGAACCTCAGTACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	85033801	85018042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730
ENSMUSG00000024120.13_85033768_85048049_1	chr17	-	560	6	ISM	ENSMUSG00000024120.13	ENSMUST00000112308.9	4393	38	49937	21093	32711	-21093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTTGTTGTCTAACTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	85048049	85033767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971
ENSMUSG00000024120.13_85048018_85059812_1	chr17	-	580	5	ISM	ENSMUSG00000024120.13	ENSMUST00000112308.9	4393	38	38174	35343	20948	8370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGTAAGCTAGTAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	85059812	85048017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736
ENSMUSG00000024120.13_85060538_85062026_1	chr17	-	247	3	ISM	ENSMUSG00000024120.13	ENST00000682104.1	2022	19	18734	4150	18734	-4150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGTGTAATCCATCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	85062026	85060537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85060620_85060832_85060940_85061968
ENSMUSG00000024120.13_85060833_85069446_1	chr17	-	260	4	ISM	ENSMUSG00000024120.13	ENST00000682104.1	2022	19	11314	4445	11314	-4445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCATTTCATTTTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	85069446	85060832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85060940_85061968_85062027_85063685_85063714_85069379
ENSMUSG00000024120.13_85077057_85077860_1	chr17	-	259	3	ISM	ENSMUSG00000024120.13	ENST00000682104.1	2022	19	2900	20669	2900	-20669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCTGGGCATCAGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	85077860	85077056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85077131_85077427_85077534_85077781
ENSMUSG00000024120.13_85077428_85079607_1	chr17	-	611	5	ISM	ENSMUSG00000024120.13	ENST00000682104.1	2022	19	1153	21040	1153	-21040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTGGTCTTGTAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	85079607	85077427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520
ENSMUSG00000024121.14_24382989_24383756_1	chr17	-	678	2	ISM	ENSMUSG00000024121.14	ENSMUST00000024932.12	1183	3	4679	149	4679	138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGACTGTTGCCTTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	24383756	24382988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24383583_24383672
ENSMUSG00000024121.14_24383127_24388237_1	chr17	-	698	3	FSM	ENSMUSG00000024121.14	ENSMUST00000024932.12	1183	3	198	287	198	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTAGAGTGCTCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24388237	24383126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24383583_24383672_24383857_24388179
ENSMUSG00000024121.14_24383248_24388435_1	chr17	-	775	3	FSM	ENSMUSG00000024121.14	ENSMUST00000024932.12	1183	3	0	408	0	-121	multi-exon	FALSE	canonical	NA	NA	NA	NA	1528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGTCTGTCGCCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	24388435	24383247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24383583_24383672_24383857_24388179
ENSMUSG00000024127.16_85370998_85397649_1	chr17	-	3155	14	FSM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	0	100	0	-100	multi-exon	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCCTTGCTTCTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	85397649	85370997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
ENSMUSG00000024127.16_85371059_85397649_1	chr17	-	3094	14	FSM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	0	161	0	-161	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAATATTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	85397649	85371058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
ENSMUSG00000024127.16_85371957_85384255_1	chr17	-	1363	8	ISM	ENSMUSG00000024127.16	ENST00000378511.7	2249	13	11759	108	11759	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGTGTAATTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	85384255	85371956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85384036
ENSMUSG00000024127.16_85372108_85385986_1	chr17	-	1280	9	ISM	ENSMUSG00000024127.16	ENST00000378511.7	2249	13	10028	259	10028	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCGAGGCGCTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	85385986	85372107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85384036_85384254_85385916
ENSMUSG00000024127.16_85372509_85388549_1	chr17	-	1311	9	ISM	ENSMUSG00000024127.16	ENST00000378511.7	2249	13	7465	660	7465	-551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGGGGGAACCACGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	85388549	85372508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85384036_85384254_85385916_85386053_85388491
ENSMUSG00000024127.16_85373576_85389468_1	chr17	-	1370	8	ISM	ENSMUSG00000024127.16	ENST00000378511.7	2249	13	6546	1727	6546	-1618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGAGCTGCAGCTATGC	NA	NA	NA	NA	NA	NA	NA	NA	85389468	85373575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85384036_85384254_85385916_85386053_85388491_85388699_85389399
ENSMUSG00000024127.16_85373696_85390680_1	chr17	-	1308	9	ISM	ENSMUSG00000024127.16	ENST00000378511.7	2249	13	5334	1847	5334	-1738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATACCACCCTTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	85390680	85373695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620
ENSMUSG00000024127.16_85376346_85396129_1	chr17	-	1856	10	ISM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	1523	4388	-115	-4388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGAGCTCCTGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	85396129	85376345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767
ENSMUSG00000024127.16_85376422_85395811_1	chr17	-	1276	9	ISM	ENSMUSG00000024127.16	ENST00000378511.7	2249	13	203	4573	203	-4464	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTCAGCCGAGCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	85395811	85376421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85376530_85377855_85378032_85379339_85379538_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767
ENSMUSG00000024127.16_85376472_85395866_1	chr17	-	1281	9	ISM	ENSMUSG00000024127.16	ENST00000378511.7	2249	13	148	4623	148	-4514	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCCTTGCTGACTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	85395866	85376471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85376530_85377855_85378032_85379339_85379538_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767
ENSMUSG00000024127.16_85376510_85395937_1	chr17	-	1314	9	ISM	ENSMUSG00000024127.16	ENST00000378511.7	2249	13	77	4661	77	-4552	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGGCATGCCGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	85395937	85376509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_85376530_85377855_85378032_85379339_85379538_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767
ENSMUSG00000024137.10_24662756_24666465_1	chr17	-	2130	11	ISM	ENSMUSG00000024137.10	ENSMUST00000056032.9	2574	14	7820	3	7820	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGTTGTGATTGGG	NA	NA	NA	NA	NA	NA	NA	NA	24666465	24662755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271
ENSMUSG00000024137.10_24663106_24674260_1	chr17	-	2196	14	FSM	ENSMUSG00000024137.10	ENSMUST00000056032.9	2574	14	25	353	25	-261	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTCACAGCCCGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	24674260	24663105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ENSMUSG00000024143.16_87270720_87305995_1	chr17	+	2439	5	FSM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	210	1502	210	1139	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCTGTTATCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	87270719	87305995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_87271176_87271727_87271787_87301986_87302152_87302431_87302528_87304332
ENSMUSG00000024143.16_87270965_87306270_1	chr17	+	2469	5	FSM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	455	1227	455	-1227	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGCCTTATGTATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	87270964	87306270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_87271176_87271727_87271787_87301986_87302152_87302431_87302528_87304332
ENSMUSG00000024143.16_87271013_87306393_1	chr17	+	2544	5	FSM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	503	1104	503	-1104	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGGAACCAAGACAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	87271012	87306393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_87271176_87271727_87271787_87301986_87302152_87302431_87302528_87304332
ENSMUSG00000024143.16_87302023_87306557_1	chr17	+	2450	3	ISM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	31513	940	0	-940	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAACGTGCACTGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	87302022	87306557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_87302152_87302431_87302528_87304332
ENSMUSG00000024143.16_87302023_87306590_1	chr17	+	2483	3	ISM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	31513	907	0	-907	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTGATCACGGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	87302022	87306590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_87302152_87302431_87302528_87304332
ENSMUSG00000024146.10_87332978_87342792_1	chr17	+	738	5	FSM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	0	446	0	-446	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATGCATTTATTTATAG	NA	NA	NA	NA	NA	NA	NA	NA	87332977	87342792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_87333104_87335126_87335193_87338435_87338491_87341683_87341788_87342405
ENSMUSG00000024146.10_87335127_87342900_1	chr17	+	720	4	ISM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	2149	338	2149	-338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAATGAGCAGCACCTTA	NA	NA	NA	NA	NA	NA	NA	NA	87335126	87342900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_87335193_87338435_87338491_87341683_87341788_87342405
ENSMUSG00000024146.10_87335127_87342980_1	chr17	+	800	4	ISM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	2149	258	2149	-258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCGAAAGTCTAAGACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	87335126	87342980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_87335193_87338435_87338491_87341683_87341788_87342405
ENSMUSG00000024150.13_87563216_87565518_1	chr17	-	585	3	NNC	ENSMUSG00000024150.13	novel	813	5	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	975	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCCACATGACTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	87565518	87563215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_87563478_87564574_87564735_87565355
ENSMUSG00000024150.13_87563216_87590770_1	chr17	-	519	3	FSM	ENSMUSG00000024150.13	ENST00000444761.6	660	3	137	4	137	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCCACATGACTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	87590770	87563215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_87563486_87564574_87564735_87590681
ENSMUSG00000024150.13_87563216_87590825_1	chr17	-	574	3	FSM	ENSMUSG00000024150.13	ENST00000444761.6	660	3	82	4	82	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCCACATGACTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	87590825	87563215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_87563486_87564574_87564735_87590681
ENSMUSG00000024150.13_87563398_87571606_1	chr17	-	448	4	ISM	ENSMUSG00000024150.13	ENSMUST00000144236.9	2017	5	1726	1312	1696	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCTACATCGACTACGCT	NA	NA	NA	NA	NA	NA	NA	NA	87571606	87563397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_87563486_87564574_87564735_87565355_87565518_87571568
ENSMUSG00000024150.13_87563398_87571682_1	chr17	-	524	4	ISM	ENSMUSG00000024150.13	ENSMUST00000144236.9	2017	5	1650	1312	1620	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCTACATCGACTACGCT	NA	NA	NA	NA	NA	NA	NA	NA	87571682	87563397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_87563486_87564574_87564735_87565355_87565518_87571568
ENSMUSG00000024150.13_87563398_87590881_1	chr17	-	448	3	FSM	ENSMUSG00000024150.13	ENST00000444761.6	660	3	26	186	26	-182	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCTACATCGACTACGCT	NA	NA	NA	NA	NA	NA	NA	NA	87590881	87563397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_87563486_87564574_87564735_87590681
ENSMUSG00000024151.14_87979758_87996532_1	chr17	+	1505	7	ISM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	0	34609	0	-34609	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCAGCGTCATCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	87979757	87996532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369
ENSMUSG00000024151.14_87980157_88015965_1	chr17	+	1463	10	ISM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	399	15176	399	-15176	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCGCAACAACAAGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	87980156	88015965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879
ENSMUSG00000024151.14_87985684_88020119_1	chr17	+	1465	10	ISM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	5926	11022	5926	-11022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCATTGTTAAAGAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	87985683	88020119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056
ENSMUSG00000024151.14_87987226_88024929_1	chr17	+	1442	10	ISM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	7468	6212	7468	-6212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCCATTGTTAGCTTCGC	NA	NA	NA	NA	NA	NA	NA	NA	87987225	88024929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882
ENSMUSG00000024151.14_87987256_88025004_1	chr17	+	1487	10	ISM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	7498	6137	7498	-6137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGGAGAATTATATT	NA	NA	NA	NA	NA	NA	NA	NA	87987255	88025004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882
ENSMUSG00000024151.14_87987345_88025106_1	chr17	+	1500	10	ISM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	7587	6035	7587	-6035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGTTCCACATCATTAC	NA	NA	NA	NA	NA	NA	NA	NA	87987344	88025106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882
ENSMUSG00000024151.14_87987449_88026092_1	chr17	+	1482	11	ISM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	7691	5049	7691	-5049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCGGGTGTTTTGTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	87987448	88026092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028
ENSMUSG00000024151.14_87992893_88026805_1	chr17	+	1480	10	ISM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	13135	4336	13135	-4336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTACATTGCAACGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	87992892	88026805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715
ENSMUSG00000024151.14_87996370_88028434_1	chr17	+	1506	9	ISM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	16612	2707	16612	-2707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATGTGACGAAGCCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	87996369	88028434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310
ENSMUSG00000024151.14_87996532_88030832_1	chr17	+	1470	10	ISM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	16774	309	16774	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCCGCGAAGCTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	87996531	88030832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ENSMUSG00000024151.14_88003969_88030936_1	chr17	+	1490	9	ISM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	24211	205	24211	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGGGTGGGCGTGCACG	NA	NA	NA	NA	NA	NA	NA	NA	88003968	88030936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ENSMUSG00000024158.18_25069464_25080388_1	chr17	+	853	7	ISM	ENSMUSG00000024158.18	ENSMUST00000118788.8	1191	9	0	3036	0	-3036	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGAGCATGGCTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	25069463	25080388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25069643_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286
ENSMUSG00000024158.18_25069641_25083263_1	chr17	+	853	9	FSM	ENSMUSG00000024158.18	ENSMUST00000118788.8	1191	9	177	161	0	-161	multi-exon	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCACACCCACGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	25069640	25083263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25069643_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
ENSMUSG00000024158.18_25071704_25083263_2	chr17	+	852	8	ISM	ENSMUSG00000024158.18	ENSMUST00000024974.16	1101	9	2063	161	2063	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCACACCCACGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	25071703	25083263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
ENSMUSG00000024158.18_25072604_25083424_1	chr17	+	838	7	ISM	ENSMUSG00000024158.18	ENSMUST00000024974.16	1101	9	2963	0	2963	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTTATGGACTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	25072603	25083424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
ENSMUSG00000024160.17_25105654_25111123_1	chr17	+	1599	7	NNC	ENSMUSG00000024160.17	novel	1641	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTCTATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	25105653	25111123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_25105735_25106753_25106892_25109261_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ENSMUSG00000024165.10_25163414_25164604_1	chr17	-	290	2	ISM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	15059	1970	15059	-1970	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTGTTTCCTTTAACTC	NA	NA	NA	NA	NA	NA	NA	NA	25164604	25163413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25163653_25164553
ENSMUSG00000024165.10_25163574_25175044_1	chr17	-	324	4	ISM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	4619	2130	4619	-2130	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCACACCTACAGTTGACA	NA	NA	NA	NA	NA	NA	NA	NA	25175044	25163573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991
ENSMUSG00000024165.10_25167613_25179628_1	chr17	-	378	3	ISM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	35	6169	35	-6169	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGGACTACATTCATAT	NA	NA	NA	NA	NA	NA	NA	NA	25179628	25167612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25167755_25174991_25175141_25179541
ENSMUSG00000024170.16_25318962_25334057_1	chr17	-	2355	20	ISM	ENSMUSG00000024170.16	ENSMUST00000024987.6	3434	21	822	411	200	-411	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2822	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGCCTGGGCCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	25334057	25318961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910
ENSMUSG00000024170.16_25320622_25325883_1	chr17	-	1129	11	ISM	ENSMUSG00000024170.16	ENST00000262319.11	2284	18	8374	0	8374	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACATGTGAGTGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	25325883	25320621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324804_25324962_25325043_25325745
ENSMUSG00000024170.16_25321034_25325999_1	chr17	-	1059	11	ISM	ENSMUSG00000024170.16	ENST00000262319.11	2284	18	8258	412	8258	-412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCCACACCTTAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	25325999	25321033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324804_25324962_25325043_25325745_25325883_25325962
ENSMUSG00000024170.16_25321610_25326107_1	chr17	-	1117	10	ISM	ENSMUSG00000024170.16	ENST00000262319.11	2284	18	8150	988	8150	-988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTCTGGAGCTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	25326107	25321609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324804_25324962_25325043_25325745_25325883_25325962
ENSMUSG00000024170.16_25322646_25329273_1	chr17	-	1071	11	ISM	ENSMUSG00000024170.16	ENST00000262319.11	2284	18	4984	2024	4984	-2024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCGTTTCTCAGACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	25329273	25322645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324804_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200
ENSMUSG00000024170.16_25322705_25329744_1	chr17	-	1106	12	ISM	ENSMUSG00000024170.16	ENST00000262319.11	2284	18	4513	2083	4513	-2083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCAGAGACGTTCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	25329744	25322704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324804_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680
ENSMUSG00000024170.16_25323779_25330160_1	chr17	-	1151	11	ISM	ENSMUSG00000024170.16	ENST00000262319.11	2284	18	4097	3157	4097	-3157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTAGCATGGTGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	25330160	25323778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25323899_25324057_25324150_25324319_25324409_25324703_25324804_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089
ENSMUSG00000024170.16_25324110_25332015_1	chr17	-	1039	11	ISM	ENSMUSG00000024170.16	ENST00000262319.11	2284	18	2242	3488	2242	-3488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAAGGGGCTTGAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	25332015	25324109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25324150_25324319_25324409_25324703_25324804_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953
ENSMUSG00000024170.16_25324129_25332108_1	chr17	-	1113	11	ISM	ENSMUSG00000024170.16	ENST00000262319.11	2284	18	2149	3507	2149	-3507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACGCTGGGAGGCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	25332108	25324128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25324150_25324319_25324409_25324703_25324804_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953
ENSMUSG00000024170.16_25324704_25332232_1	chr17	-	1127	9	ISM	ENSMUSG00000024170.16	ENST00000262319.11	2284	18	2025	4082	2025	-4082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGAGTGGGGCTCCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	25332232	25324703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25324804_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953
ENSMUSG00000024170.16_25324782_25333929_1	chr17	-	1067	10	ISM	ENSMUSG00000024170.16	ENST00000262319.11	2284	18	328	4160	328	-4160	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAGAGATGCCAGAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	25333929	25324781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25324804_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910
ENSMUSG00000024170.16_25325746_25334166_1	chr17	-	1202	8	ISM	ENSMUSG00000024170.16	ENST00000262319.11	2284	18	91	5124	91	-5124	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTAGGCCGTCATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	25334166	25325745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910
ENSMUSG00000024170.16_25325963_25334286_1	chr17	-	1185	7	ISM	ENSMUSG00000024170.16	ENST00000262319.11	2284	18	-29	5341	-29	-5341	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCAGGCTGTGGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	25334286	25325962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910
ENSMUSG00000024173.12_25562460_25562723_1	chr17	-	192	2	ISM	ENSMUSG00000024173.12	ENST00000211076.5	736	4	1446	58	1446	-58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATCTACACCCGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	25562723	25562459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25562558_25562629
ENSMUSG00000024173.12_25562533_25563654_1	chr17	-	219	3	ISM	ENSMUSG00000024173.12	ENST00000211076.5	736	4	515	131	515	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGGTAGAAGACACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	25563654	25562532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25562558_25562629_25562794_25563624
ENSMUSG00000024173.12_25562629_25563661_1	chr17	-	202	2	ISM	ENSMUSG00000024173.12	ENST00000211076.5	736	4	508	227	508	-227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTCCTGTCCCCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	25563661	25562628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25562794_25563624
ENSMUSG00000024173.12_25563782_25564068_1	chr17	-	158	2	ISM	ENSMUSG00000024173.12	ENST00000211076.5	736	4	101	1380	101	-1380	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTCCAGGATGGGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	25564068	25563781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25563891_25564019
ENSMUSG00000024175.3_25690764_25693201_1	chr17	+	649	3	ISM	ENSMUSG00000024175.3	ENST00000559466.1	1316	6	53	2311	53	-2311	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATCCGCATTCCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	25690763	25693201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25691230_25692709_25692781_25693089
ENSMUSG00000024175.3_25691015_25693787_1	chr17	+	591	4	ISM	ENSMUSG00000024175.3	ENST00000559466.1	1316	6	304	1725	304	-1725	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGAGCTGGACGACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	25691014	25693787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25691230_25692709_25692781_25693089_25693201_25693593
ENSMUSG00000024175.3_25691107_25694689_1	chr17	+	705	5	ISM	ENSMUSG00000024175.3	ENST00000559466.1	1316	6	396	823	396	-823	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTGCTGTTTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	25691106	25694689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25691230_25692709_25692781_25693089_25693201_25693593_25693837_25694532
ENSMUSG00000024175.3_25692748_25695351_1	chr17	+	598	5	ISM	ENSMUSG00000024175.3	ENST00000559466.1	1316	6	2037	161	2037	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGATGCGGAGCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	25692747	25695351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25692781_25693089_25693201_25693593_25693837_25694532_25694688_25695295
ENSMUSG00000024175.3_25693594_25695566_1	chr17	+	669	3	ISM	ENSMUSG00000024175.3	ENST00000559466.1	1316	6	2883	-54	2883	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCCTAGAGTGGCGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	25693593	25695566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25693837_25694532_25694688_25695295
ENSMUSG00000024177.10_26310710_26314447_1	chr17	-	875	5	FSM	ENSMUSG00000024177.10	ENSMUST00000025007.7	1006	5	129	2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTCTACTTACTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	26314447	26310709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26311127_26312590_26312704_26312832_26312935_26313110_26313245_26314338
ENSMUSG00000024181.10_26342474_26345469_1	chr17	+	950	5	FSM	ENSMUSG00000024181.10	ENSMUST00000025014.10	1068	5	0	118	0	-118	multi-exon	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGAGCGGAGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	26342473	26345469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345244
ENSMUSG00000024181.10_26342518_26345469_1	chr17	+	906	5	FSM	ENSMUSG00000024181.10	ENSMUST00000025014.10	1068	5	44	118	0	-118	multi-exon	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGAGCGGAGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	26342517	26345469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345244
ENSMUSG00000024181.10_26342518_26345587_2	chr17	+	1024	5	FSM	ENSMUSG00000024181.10	ENSMUST00000025014.10	1068	5	44	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	26342517	26345587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345244
ENSMUSG00000024181.10_26342518_26345587_3	chr17	+	1022	5	NNC	ENSMUSG00000024181.10	novel	1068	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	26342517	26345587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_26342824_26343529_26343693_26344242_26344366_26344451_26344539_26345244
ENSMUSG00000024181.10_26342697_26345587_1	chr17	+	845	5	FSM	ENSMUSG00000024181.10	ENSMUST00000025014.10	1068	5	223	0	179	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	26342696	26345587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345244
ENSMUSG00000024186.16_26422268_26429507_1	chr17	+	1208	13	NNC	ENSMUSG00000024186.16	novel	1210	13	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTGGTGAGCCTCCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	26422267	26429507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_26422367_26422439_26422487_26422551_26422659_26423305_26423358_26423460_26423520_26423824_26423902_26424081_26424180_26426296_26426432_26426519_26426634_26426732_26426849_26426965_26427054_26427137_26427277_26429430
ENSMUSG00000024186.16_26422268_26429507_2	chr17	+	1182	12	FSM	ENSMUSG00000024186.16	ENST00000359740.6	1178	12	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTGGTGAGCCTCCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	26422267	26429507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26422367_26422435_26422487_26422551_26422679_26423460_26423520_26423824_26423902_26424081_26424186_26426300_26426432_26426519_26426634_26426732_26426849_26426965_26427054_26427137_26427277_26429430
ENSMUSG00000024186.16_26422268_26429507_3	chr17	+	1210	13	NNC	ENSMUSG00000024186.16	novel	1210	13	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTGGTGAGCCTCCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	26422267	26429507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_26422367_26422439_26422487_26422551_26422659_26423305_26423358_26423460_26423520_26423824_26423902_26424081_26424186_26426300_26426432_26426519_26426634_26426732_26426849_26426965_26427054_26427137_26427277_26429430
ENSMUSG00000024186.16_26422268_26429507_4	chr17	+	1181	12	NNC	ENSMUSG00000024186.16	novel	1178	12	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTGGTGAGCCTCCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	26422267	26429507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_26422367_26422435_26422487_26422551_26422679_26423460_26423520_26423824_26423902_26424081_26424186_26426300_26426432_26426519_26426634_26426732_26426849_26426966_26427054_26427137_26427277_26429430
ENSMUSG00000024186.16_26422268_26429507_5	chr17	+	1176	12	NNC	ENSMUSG00000024186.16	novel	1178	12	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTGGTGAGCCTCCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	26422267	26429507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_26422367_26422435_26422487_26422551_26422679_26423460_26423520_26423824_26423902_26424081_26424186_26426300_26426432_26426519_26426634_26426732_26426849_26426965_26427048_26427137_26427277_26429430
ENSMUSG00000024187.16_26431452_26433367_1	chr17	-	1409	3	ISM	ENSMUSG00000024187.16	ENSMUST00000118487.8	2629	12	29748	-235	29748	213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTACAGAAGCCCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	26433367	26431451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26432692_26432777_26432881_26433301
ENSMUSG00000024188.17_26471870_26498336_1	chr17	+	941	8	ISM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	0	1357	0	-1357	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTTTCAAGATCTATCA	NA	NA	NA	NA	NA	NA	NA	NA	26471869	26498336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306
ENSMUSG00000024188.17_26471973_26498336_1	chr17	+	909	9	ISM	ENSMUSG00000024188.17	ENST00000629543.2	1397	11	-25	2607	-25	-1357	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTTTCAAGATCTATCA	NA	NA	NA	NA	NA	NA	NA	NA	26471972	26498336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306
ENSMUSG00000024188.17_26471973_26498998_1	chr17	+	902	9	FSM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	103	695	-25	-695	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGTTCCAGATCCCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	26471972	26498998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ENSMUSG00000024188.17_26472965_26498975_1	chr17	+	840	9	ISM	ENSMUSG00000024188.17	ENST00000629543.2	1397	11	967	1968	967	-718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGAGAGCGGCGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	26472964	26498975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ENSMUSG00000024188.17_26474005_26499102_1	chr17	+	913	8	ISM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	2135	591	2007	-591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTACTCTGACTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	26474004	26499102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ENSMUSG00000024188.17_26474005_26499104_1	chr17	+	911	7	NNC	ENSMUSG00000024188.17	novel	1700	9	NA	NA	2007	-589	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTCTGACTCCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	26474004	26499104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498908
ENSMUSG00000024188.17_26476928_26500679_1	chr17	+	871	8	ISM	ENSMUSG00000024188.17	ENST00000629543.2	1397	11	4930	264	4930	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCCAATGGCAAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	26476927	26500679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ENSMUSG00000024188.17_26476982_26500745_1	chr17	+	883	8	ISM	ENSMUSG00000024188.17	ENST00000629543.2	1397	11	4984	198	4984	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGGCGCTGTAAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	26476981	26500745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ENSMUSG00000024188.17_26485285_26499306_1	chr17	+	895	6	ISM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	13415	387	13287	-387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTGGGATGGGGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	26485284	26499306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ENSMUSG00000024188.17_26486249_26499462_1	chr17	+	908	5	ISM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	14379	231	14251	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGCATTCACTTTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	26486248	26499462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ENSMUSG00000024188.17_26486249_26500942_1	chr17	+	888	5	NNC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	14251	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGTTGGGGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	26486248	26500942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_26486333_26494647_26494825_26496519_26496609_26498908_26499103_26500598
ENSMUSG00000024188.17_26486249_26500942_2	chr17	+	892	6	ISM	ENSMUSG00000024188.17	ENST00000629543.2	1397	11	14251	1	14251	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGTTGGGGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	26486248	26500942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ENSMUSG00000024188.17_26486315_26499497_1	chr17	+	877	5	ISM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	14445	196	14317	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGATCCTCCTGCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	26486314	26499497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ENSMUSG00000024188.17_26494753_26499694_1	chr17	+	951	4	ISM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	22883	-1	22755	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	26494752	26499694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26494825_26496519_26496609_26498306_26498337_26498934
ENSMUSG00000024188.17_26494784_26499694_1	chr17	+	920	4	ISM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	22914	-1	22786	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	26494783	26499694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26494825_26496519_26496609_26498306_26498337_26498934
ENSMUSG00000024190.8_26724912_26725997_1	chr17	-	752	2	ISM	ENSMUSG00000024190.8	ENSMUST00000236661.2	1587	4	1449	347	1449	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTATTAACCATTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	26725997	26724911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26725625_26725958
ENSMUSG00000024190.8_26724972_26726042_1	chr17	-	737	2	ISM	ENSMUSG00000024190.8	ENSMUST00000236661.2	1587	4	1404	407	1404	-407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCAGTTTCTTCGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	26726042	26724971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26725625_26725958
ENSMUSG00000024190.8_26725044_26726127_1	chr17	-	750	2	ISM	ENSMUSG00000024190.8	ENSMUST00000236661.2	1587	4	1319	479	1319	-479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGGACCAATATATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	26726127	26725043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26725625_26725958
ENSMUSG00000024190.8_26725149_26726697_1	chr17	-	846	3	ISM	ENSMUSG00000024190.8	ENSMUST00000236661.2	1587	4	749	584	749	-584	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTAACACCCCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	26726697	26725148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26725625_26725958_26726179_26726547
ENSMUSG00000024190.8_26725198_26726697_1	chr17	-	797	3	ISM	ENSMUSG00000024190.8	ENSMUST00000236661.2	1587	4	749	633	749	-633	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGCAATGCAATAACTC	NA	NA	NA	NA	NA	NA	NA	NA	26726697	26725197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26725625_26725958_26726179_26726547
ENSMUSG00000024190.8_26725312_26726998_1	chr17	-	747	4	FSM	ENSMUSG00000024190.8	ENSMUST00000025025.7	1990	4	495	748	448	-747	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAACAGTGCCCTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	26726998	26725311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26725625_26725958_26726179_26726547_26726694_26726930
ENSMUSG00000024190.8_26725365_26727053_1	chr17	-	749	4	FSM	ENSMUSG00000024190.8	ENSMUST00000025025.7	1990	4	440	801	393	-800	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACCTCTACTACCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	26727053	26725364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26725625_26725958_26726179_26726547_26726694_26726930
ENSMUSG00000024190.8_26725490_26727106_1	chr17	-	677	4	FSM	ENSMUSG00000024190.8	ENSMUST00000025025.7	1990	4	387	926	340	-925	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCGGAGTATCATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	26727106	26725489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26725625_26725958_26726179_26726547_26726694_26726930
ENSMUSG00000024190.8_26726048_26727450_1	chr17	-	797	3	ISM	ENSMUSG00000024190.8	ENSMUST00000025025.7	1990	4	43	1484	-4	-1483	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGTCACTACCAGTACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	26727450	26726047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26726179_26726547_26726694_26726930
ENSMUSG00000024193.9_27152311_27154371_1	chr17	+	801	6	ISM	ENSMUSG00000024193.9	ENST00000374516.8	2252	15	1	2491	1	-2491	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGAGAGGGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	27152310	27154371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27152509_27153167_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222
ENSMUSG00000024193.9_27152417_27154609_1	chr17	+	791	7	ISM	ENSMUSG00000024193.9	ENSMUST00000237412.2	2094	15	-17	2256	-17	-2253	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGACAGGACATGCACGC	NA	NA	NA	NA	NA	NA	NA	NA	27152416	27154609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27152509_27153167_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513
ENSMUSG00000024193.9_27153167_27154792_1	chr17	+	769	7	ISM	ENSMUSG00000024193.9	ENSMUST00000237412.2	2094	15	733	2073	733	-2070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGATGGGTTGTGATTCA	NA	NA	NA	NA	NA	NA	NA	NA	27153166	27154792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723
ENSMUSG00000024193.9_27153277_27154968_1	chr17	+	735	8	ISM	ENSMUSG00000024193.9	ENSMUST00000237412.2	2094	15	843	1897	843	-1894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCCCCTTCACCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	27153276	27154968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892
ENSMUSG00000024193.9_27153426_27155165_1	chr17	+	787	8	ISM	ENSMUSG00000024193.9	ENSMUST00000237412.2	2094	15	992	1700	992	-1697	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCAAAAGAGGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	27153425	27155165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097
ENSMUSG00000024193.9_27154062_27155560_1	chr17	+	753	8	ISM	ENSMUSG00000024193.9	ENSMUST00000237412.2	2094	15	1628	1305	1628	-1302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAGGAGGAGGCAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	27154061	27155560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155260_27155366_27155485
ENSMUSG00000024193.9_27154330_27155748_1	chr17	+	711	8	ISM	ENSMUSG00000024193.9	ENST00000374516.8	2252	15	2020	1114	1896	-1114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTCTCCACCACCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	27154329	27155748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155260_27155366_27155485_27155655_27155710
ENSMUSG00000024193.9_27154721_27156110_1	chr17	+	750	7	ISM	ENSMUSG00000024193.9	ENST00000374516.8	2252	15	2411	752	2287	-752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTATCCCGTCGACACC	NA	NA	NA	NA	NA	NA	NA	NA	27154720	27156110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27154793_27154892_27155017_27155097_27155166_27155260_27155366_27155485_27155655_27155710_27155840_27156027
ENSMUSG00000024193.9_27154886_27156269_1	chr17	+	699	7	ISM	ENSMUSG00000024193.9	ENST00000374516.8	2252	15	2576	593	2452	-593	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTGGCTTCCCCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	27154885	27156269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27155017_27155097_27155166_27155260_27155366_27155485_27155655_27155710_27155840_27156027_27156109_27156253
ENSMUSG00000024193.9_27154939_27156317_1	chr17	+	694	7	ISM	ENSMUSG00000024193.9	ENST00000374516.8	2252	15	2629	545	2505	-545	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCCTCATCTTCCTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	27154938	27156317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27155017_27155097_27155166_27155260_27155366_27155485_27155655_27155710_27155840_27156027_27156109_27156253
ENSMUSG00000024193.9_27154993_27156364_1	chr17	+	687	7	ISM	ENSMUSG00000024193.9	ENST00000374516.8	2252	15	2683	498	2559	-498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCACCCCCTTCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	27154992	27156364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27155017_27155097_27155166_27155260_27155366_27155485_27155655_27155710_27155840_27156027_27156109_27156253
ENSMUSG00000024193.9_27155346_27156552_1	chr17	+	698	5	ISM	ENSMUSG00000024193.9	ENST00000374516.8	2252	15	3036	310	2912	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCTCCCCATTCACACA	NA	NA	NA	NA	NA	NA	NA	NA	27155345	27156552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27155366_27155485_27155655_27155710_27155840_27156027_27156109_27156253
ENSMUSG00000024193.9_27156025_27156865_1	chr17	+	696	2	ISM	ENSMUSG00000024193.9	ENSMUST00000237412.2	2094	15	3591	0	3591	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGCATGAGTCATTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	27156024	27156865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27156109_27156253
ENSMUSG00000024194.17_27156950_27158519_1	chr17	-	708	7	NNC	ENSMUSG00000024194.17	novel	741	7	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGCCTTTTCTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	27158519	27156949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157756_27157857_27158067_27158290_27158343_27158424
ENSMUSG00000024194.17_27157105_27157906_1	chr17	-	201	4	FSM	ENSMUSG00000024194.17	ENST00000488478.5	370	4	161	8	161	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGGGAAATCCCCCGTA	NA	NA	NA	NA	NA	NA	NA	NA	27157906	27157104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_27157151_27157545_27157592_27157700_27157761_27157857
ENSMUSG00000024197.11_56586579_56588497_1	chr17	-	712	3	ISM	ENSMUSG00000024197.11	ENST00000592528.5	1220	6	5152	-151	5152	151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGTAAAAAGATCCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	56588497	56586578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56587074_56587741_56587868_56588406
ENSMUSG00000024197.11_56586655_56588570_1	chr17	-	709	3	ISM	ENSMUSG00000024197.11	ENST00000592528.5	1220	6	5079	-75	5079	75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGTCTGAATGAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	56588570	56586654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56587074_56587741_56587868_56588406
ENSMUSG00000024197.11_56586788_56591232_1	chr17	-	712	4	ISM	ENSMUSG00000024197.11	ENST00000592528.5	1220	6	2417	58	2417	-58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGTGGGCCCCTTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	56591232	56586787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132
ENSMUSG00000024197.11_56586885_56591337_1	chr17	-	720	4	ISM	ENSMUSG00000024197.11	ENST00000592528.5	1220	6	2312	155	2312	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGCGTTCTTGCCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	56591337	56586884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132
ENSMUSG00000024197.11_56586942_56591388_1	chr17	-	714	4	ISM	ENSMUSG00000024197.11	ENST00000592528.5	1220	6	2261	212	2261	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGAACGACCTTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	56591388	56586941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132
ENSMUSG00000024197.11_56587044_56593272_1	chr17	-	714	5	ISM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	4239	2568	377	-314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACATCACCCAGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	56593272	56587043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212
ENSMUSG00000024197.11_56587841_56593546_1	chr17	-	707	5	ISM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	3965	3365	103	-1111	internal_fragment	TRUE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGCTGGGGGAGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	56593546	56587840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447
ENSMUSG00000024197.11_56588536_56594857_1	chr17	-	715	5	ISM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	2654	4060	-1208	-1806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCGGTTGGGCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	56594857	56588535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793
ENSMUSG00000024197.11_56591137_56597511_1	chr17	-	717	5	ISM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	0	6661	0	-4407	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGAGTATCCTTACCC	NA	NA	NA	NA	NA	NA	NA	NA	56597511	56591136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
ENSMUSG00000024197.11_56591191_56593225_1	chr17	-	220	2	ISM	ENSMUSG00000024197.11	ENST00000592528.5	1220	6	424	4461	424	-4461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGAAATCAGAGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	56593225	56591190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56591394_56593208
ENSMUSG00000024197.11_56591238_56593289_1	chr17	-	237	2	ISM	ENSMUSG00000024197.11	ENST00000592528.5	1220	6	360	4508	360	-4508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTCACGTGTGGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	56593289	56591237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56591394_56593208
ENSMUSG00000024197.11_56591375_56593546_1	chr17	-	205	3	ISM	ENSMUSG00000024197.11	ENST00000592528.5	1220	6	103	4645	103	-4645	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATCTAGCTCAGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	56593546	56591374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56591394_56593208_56593296_56593447
ENSMUSG00000024208.17_27341642_27352876_1	chr17	-	474	4	NNC	ENSMUSG00000024208.17	novel	452	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGGTTTGGAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	27352876	27341641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_27341815_27344120_27344191_27344857_27344926_27352713
ENSMUSG00000024208.17_27341642_27352876_2	chr17	-	473	4	NNC	ENSMUSG00000024208.17	novel	500	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGGTTTGGAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	27352876	27341641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_27341815_27344128_27344191_27344857_27344933_27352713
ENSMUSG00000024217.11_28059058_28064246_1	chr17	+	328	4	ISM	ENSMUSG00000024217.11	ENSMUST00000071006.9	758	6	-3	6693	-3	-6691	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTTCAAACGTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	28059057	28064246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_28059144_28059437_28059481_28061243_28061353_28064156
ENSMUSG00000024217.11_28059129_28066963_1	chr17	+	294	5	ISM	ENSMUSG00000024217.11	ENSMUST00000071006.9	758	6	68	3976	0	-3974	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGAGGCCCTCCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	28059128	28066963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_28059144_28059437_28059481_28061243_28061353_28064156_28064247_28066926
ENSMUSG00000024217.11_28064157_28070715_1	chr17	+	299	3	ISM	ENSMUSG00000024217.11	ENSMUST00000233657.2	882	6	5028	222	5028	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACCCGGCCAGACAGATA	NA	NA	NA	NA	NA	NA	NA	NA	28064156	28070715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_28064247_28066926_28067032_28070611
ENSMUSG00000024218.14_28120470_28122141_1	chr17	-	458	3	ISM	ENSMUSG00000024218.14	ENSMUST00000025057.5	1220	5	4557	368	4489	164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATGTTGAAGACTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	28122141	28120469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28120764_28121501_28121599_28122074
ENSMUSG00000024218.14_28120636_28126569_1	chr17	-	557	5	FSM	ENSMUSG00000024218.14	ENSMUST00000025057.5	1220	5	129	534	61	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCTAAGGGAGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	28126569	28120635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474
ENSMUSG00000024218.14_28120636_28126569_2	chr17	-	460	4	FSM	ENSMUSG00000024218.14	ENST00000420584.3	523	4	61	2	61	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCTAAGGGAGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	28126569	28120635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_28120764_28122074_28122163_28124235_28124385_28126474
ENSMUSG00000024218.14_28127082_28128113_1	chr17	-	495	2	ISM	ENSMUSG00000024218.14	ENSMUST00000114848.8	2207	6	103	6986	103	-6448	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGAAATCCGAGGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	28128113	28127081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_28127218_28127754
ENSMUSG00000024227.15_59187611_59195162_1	chr17	-	512	4	NNC	ENSMUSG00000024227.15	novel	971	7	NA	NA	5328	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAGCGGTAAGCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	59195162	59187610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_59187738_59190904_59191087_59192854_59192898_59195002
ENSMUSG00000024227.15_59187619_59229594_1	chr17	-	538	5	ISM	ENSMUSG00000024227.15	ENST00000412514.2	971	7	31903	8	-29104	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAGAGAATCAGCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	59229594	59187618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_59187738_59190899_59191087_59192854_59192898_59195002_59195161_59229563
ENSMUSG00000024227.15_59187662_59229652_1	chr17	-	553	5	ISM	ENSMUSG00000024227.15	ENST00000412514.2	971	7	31845	51	-29162	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATCAGAAGAGTTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	59229652	59187661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_59187738_59190899_59191087_59192854_59192898_59195002_59195161_59229563
ENSMUSG00000024227.15_59187705_59229713_1	chr17	-	571	5	ISM	ENSMUSG00000024227.15	ENST00000412514.2	971	7	31784	94	-29223	-94	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACCCATGGCTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	59229713	59187704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_59187738_59190899_59191087_59192854_59192898_59195002_59195161_59229563
ENSMUSG00000024227.15_59190898_59239467_1	chr17	-	622	5	ISM	ENSMUSG00000024227.15	ENST00000412514.2	971	7	22030	3287	22030	-3287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGTCAACATCATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	59239467	59190897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_59191087_59192854_59192898_59195002_59195161_59229563_59229737_59239408
ENSMUSG00000024227.15_59191063_59261395_1	chr17	-	579	6	ISM	ENSMUSG00000024227.15	ENST00000412514.2	971	7	102	3452	102	-3452	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACAACAGTAGCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	59261395	59191062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_59191087_59192854_59192898_59195002_59195161_59229563_59229737_59239408_59239524_59261329
ENSMUSG00000024227.15_59195027_59261441_1	chr17	-	536	4	NIC	ENSMUSG00000024227.15	novel	4174	13	NA	NA	56	-7416	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCTCAAACCAAGAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	59261441	59195026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_-_59195161_59229563_59229743_59239412_59239524_59261329
ENSMUSG00000024228.13_59309168_59318250_1	chr17	-	1341	6	NNC	ENSMUSG00000024228.13	novel	1344	6	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGCCTCTGTTGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	59318250	59309167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_59309287_59310323_59310524_59313498_59313613_59314618_59314787_59316849_59317431_59318091
ENSMUSG00000024228.13_59309168_59318250_2	chr17	-	1350	6	FSM	ENSMUSG00000024228.13	ENST00000507423.1	1344	6	0	-6	0	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGCCTCTGTTGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	59318250	59309167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_59309287_59310323_59310524_59313498_59313613_59314618_59314787_59316849_59317440_59318091
ENSMUSG00000024228.13_59309168_59318250_3	chr17	-	1344	6	NNC	ENSMUSG00000024228.13	novel	1344	6	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGCCTCTGTTGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	59318250	59309167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_59309287_59310323_59310524_59313498_59313607_59314618_59314787_59316849_59317440_59318091
ENSMUSG00000024228.13_59309168_59318250_4	chr17	-	1345	6	NNC	ENSMUSG00000024228.13	novel	1344	6	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGCCTCTGTTGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	59318250	59309167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_59309287_59310323_59310519_59313498_59313613_59314618_59314787_59316849_59317440_59318091
ENSMUSG00000024232.3_3508234_3512784_1	chr18	+	1143	3	FSM	ENSMUSG00000024232.3	ENSMUST00000025075.3	5074	3	311	3620	102	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGACGGGTGTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	3508233	3512784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_3508286_3511256_3511545_3511981
ENSMUSG00000024234.8_4375603_4396273_1	chr18	+	1583	9	FSM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	11	1057	11	-1057	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGAGTAGGCAACCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	4375602	4396273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUSG00000024234.8_4375704_4396347_1	chr18	+	1556	9	FSM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	112	983	112	-983	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAGAAAAAGCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	4375703	4396347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUSG00000024234.8_4379678_4396494_1	chr18	+	1519	8	ISM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	4086	836	4086	-836	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCACTAAATGTTCATAG	NA	NA	NA	NA	NA	NA	NA	NA	4379677	4396494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUSG00000024234.8_4380714_4396610_1	chr18	+	1511	7	ISM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	5122	720	5122	-720	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGCAAAAAATTGGCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	4380713	4396610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUSG00000024234.8_4380793_4396785_1	chr18	+	1607	7	ISM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	5201	545	5201	-545	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTAGTATCTATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	4380792	4396785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUSG00000024234.8_4386198_4397072_1	chr18	+	1547	5	ISM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	10606	258	10606	-258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATCCCAACTTTCACAC	NA	NA	NA	NA	NA	NA	NA	NA	4386197	4397072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUSG00000024234.8_4386289_4397163_1	chr18	+	1547	5	ISM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	10697	167	10697	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGTTGGGTTTGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	4386288	4397163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUSG00000024234.8_4386350_4397212_1	chr18	+	1535	5	ISM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	10758	118	10758	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACACTTTAGTCAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	4386349	4397212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUSG00000024234.8_4386951_4397330_1	chr18	+	1622	4	ISM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	11359	0	11359	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGATAACAGTATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	4386950	4397330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUSG00000024234.8_4387116_4397330_1	chr18	+	1457	4	ISM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	11524	0	11524	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGATAACAGTATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	4387115	4397330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUSG00000024240.14_6437138_6450313_1	chr18	-	1386	8	ISM	ENSMUSG00000024240.14	ENST00000263062.8	2906	15	40571	29	40507	-29	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGCTGTGGGGACTCGG	NA	NA	NA	NA	NA	NA	NA	NA	6450313	6437137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6437308_6439591_6439956_6440048_6440191_6440975_6441045_6441121_6441244_6448904_6449258_6450068_6450218_6450296
ENSMUSG00000024240.14_6437264_6450499_1	chr18	-	1367	9	ISM	ENSMUSG00000024240.14	ENST00000263062.8	2906	15	40385	155	40321	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACACAGTAGCAATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	6450499	6437263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6437308_6439591_6439956_6440048_6440191_6440975_6441045_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465
ENSMUSG00000024240.14_6439592_6450641_1	chr18	-	1465	8	ISM	ENSMUSG00000024240.14	ENST00000263062.8	2906	15	40243	2483	40179	-2483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGTTCTTCTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	6450641	6439591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6439956_6440048_6440191_6440975_6441045_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465
ENSMUSG00000024240.14_6439716_6452253_1	chr18	-	1360	9	ISM	ENSMUSG00000024240.14	ENST00000263062.8	2906	15	38631	2607	38567	-2607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACGCACGGCATATACCT	NA	NA	NA	NA	NA	NA	NA	NA	6452253	6439715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6439956_6440048_6440191_6440975_6441045_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232
ENSMUSG00000024240.14_6439757_6452314_1	chr18	-	1380	9	ISM	ENSMUSG00000024240.14	ENST00000263062.8	2906	15	38570	2648	38506	-2648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCCTCATCTGTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	6452314	6439756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6439956_6440048_6440191_6440975_6441045_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232
ENSMUSG00000024240.14_6439903_6453571_1	chr18	-	1375	10	ISM	ENSMUSG00000024240.14	ENST00000263062.8	2906	15	37313	2794	37249	-2794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGTCCTTCGACAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	6453571	6439902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6439956_6440048_6440191_6440975_6441045_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508
ENSMUSG00000024240.14_6439937_6453646_1	chr18	-	1416	10	ISM	ENSMUSG00000024240.14	ENST00000263062.8	2906	15	37238	2828	37174	-2828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAGTAGCACTACACCAA	NA	NA	NA	NA	NA	NA	NA	NA	6453646	6439936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6439956_6440048_6440191_6440975_6441045_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508
ENSMUSG00000024240.14_6440136_6454248_1	chr18	-	1383	10	ISM	ENSMUSG00000024240.14	ENST00000263062.8	2906	15	36636	3027	36572	-3027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACGTCGGAACAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	6454248	6440135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6440191_6440975_6441045_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186
ENSMUSG00000024240.14_6448905_6455334_1	chr18	-	1428	8	ISM	ENSMUSG00000024240.14	ENST00000263062.8	2906	15	35550	11796	35486	-11796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTTCATCTGTGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	6455334	6448904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188
ENSMUSG00000024240.14_6449231_6490646_1	chr18	-	1446	10	ISM	ENSMUSG00000024240.14	ENST00000263062.8	2906	15	238	12122	174	-12122	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACAGTATGTTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	6490646	6449230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ENSMUSG00000024240.14_6450297_6490856_1	chr18	-	1480	8	ISM	ENSMUSG00000024240.14	ENST00000263062.8	2906	15	28	13188	0	-13188	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTCAGACTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	6490856	6450296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ENSMUSG00000024240.14_6488893_6490856_1	chr18	-	892	2	FSM	ENSMUSG00000024240.14	ENST00000469059.2	856	2	-36	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	6490856	6488892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_6489391_6490462
ENSMUSG00000024246.10_81333983_81360379_1	chr17	-	910	7	ISM	ENSMUSG00000024246.10	ENSMUST00000025093.6	1833	10	12117	222	12117	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCCTGTATGGGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	81360379	81333982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323
ENSMUSG00000024246.10_81334184_81361704_1	chr17	-	883	8	ISM	ENSMUSG00000024246.10	ENSMUST00000025093.6	1833	10	10792	423	10792	-423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGCTCATTGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	81361704	81334183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552
ENSMUSG00000024246.10_81334308_81361809_1	chr17	-	864	8	ISM	ENSMUSG00000024246.10	ENSMUST00000025093.6	1833	10	10687	547	10687	-547	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAAGGGTCACATCGCT	NA	NA	NA	NA	NA	NA	NA	NA	81361809	81334307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552
ENSMUSG00000024246.10_81340078_81361941_1	chr17	-	887	7	ISM	ENSMUSG00000024246.10	ENSMUST00000025093.6	1833	10	10555	6317	10555	-6317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTACAAGAAATGGAAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	81361941	81340077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552
ENSMUSG00000024246.10_81344927_81363339_1	chr17	-	952	7	ISM	ENSMUSG00000024246.10	ENSMUST00000025093.6	1833	10	9157	11166	9157	-11166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAGATGGAAAACACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	81363339	81344926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203
ENSMUSG00000024246.10_81345533_81372496_1	chr17	-	971	7	ISM	ENSMUSG00000024246.10	ENSMUST00000025093.6	1833	10	0	11772	0	-11772	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCGCAAGGTTTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	81372496	81345532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
ENSMUSG00000024247.15_83522721_83527517_1	chr17	+	868	2	ISM	ENSMUSG00000024247.15	ENST00000294964.6	2398	8	13	4969	0	-4969	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGAGCTGGGTGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	83522720	83527517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83523534_83527462
ENSMUSG00000024247.15_83522961_83528560_1	chr17	+	862	3	ISM	ENSMUSG00000024247.15	ENST00000294964.6	2398	8	253	3926	240	-3926	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACTGCACGCTAGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	83522960	83528560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83523534_83527462_83527586_83528394
ENSMUSG00000024247.15_83523341_83531241_1	chr17	+	803	6	ISM	ENSMUSG00000024247.15	ENST00000294964.6	2398	8	633	1245	620	-1245	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGAGGACTATCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	83523340	83531241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83523534_83527462_83527586_83528394_83528667_83529218_83529299_83529554_83529660_83531211
ENSMUSG00000024247.15_83523368_83531334_1	chr17	+	869	6	ISM	ENSMUSG00000024247.15	ENST00000294964.6	2398	8	660	1152	647	-1152	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGCTCAGTGTCGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	83523367	83531334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83523534_83527462_83527586_83528394_83528667_83529218_83529299_83529554_83529660_83531211
ENSMUSG00000024247.15_83523464_83531345_1	chr17	+	784	6	ISM	ENSMUSG00000024247.15	ENST00000294964.6	2398	8	756	1141	743	-1141	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGTGCCTTTGTGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	83523463	83531345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83523534_83527462_83527586_83528394_83528667_83529218_83529299_83529554_83529660_83531211
ENSMUSG00000024247.15_83527531_83531693_1	chr17	+	759	6	ISM	ENSMUSG00000024247.15	ENST00000294964.6	2398	8	4823	793	4810	-793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCCTGGTTGACTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	83527530	83531693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83527586_83528394_83528667_83529218_83529299_83529554_83529660_83531211_83531386_83531620
ENSMUSG00000024247.15_83529571_83532145_1	chr17	+	788	3	ISM	ENSMUSG00000024247.15	ENST00000294964.6	2398	8	6863	341	6850	-341	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTCCCTAGAGGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	83529570	83532145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83529660_83531211_83531386_83531620
ENSMUSG00000024247.15_83529610_83532215_1	chr17	+	819	3	ISM	ENSMUSG00000024247.15	ENST00000294964.6	2398	8	6902	271	6889	-271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACTAGAGTGGAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	83529609	83532215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83529660_83531211_83531386_83531620
ENSMUSG00000024247.15_83531619_83532499_1	chr17	+	839	2	NNC	ENSMUSG00000024247.15	novel	2446	7	NA	NA	8898	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCCGTCATGAGCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	83531618	83532499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_83532331_83532372
ENSMUSG00000024248.15_83809363_83811572_1	chr17	-	848	2	ISM	ENSMUSG00000024248.15	ENSMUST00000025095.9	1076	3	10187	16	10187	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGATGTTTTTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	83811572	83809362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_83810167_83811528
ENSMUSG00000024248.15_83809363_83811657_1	chr17	-	1002	3	ISM	ENSMUSG00000024248.15	ENSMUST00000167741.9	1129	4	10102	0	10102	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGATGTTTTTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	83811657	83809362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_83810167_83811359_83811429_83811528
ENSMUSG00000024248.15_83809492_83811572_1	chr17	-	719	2	ISM	ENSMUSG00000024248.15	ENSMUST00000025095.9	1076	3	10187	145	10187	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTGTTTGTTCCATCGT	NA	NA	NA	NA	NA	NA	NA	NA	83811572	83809491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_83810167_83811528
ENSMUSG00000024248.15_83809567_83811661_1	chr17	-	733	2	ISM	ENSMUSG00000024248.15	ENSMUST00000025095.9	1076	3	10098	220	10098	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATAGCAACCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	83811661	83809566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_83810167_83811528
ENSMUSG00000024248.15_83809567_83821759_1	chr17	-	925	4	FSM	ENSMUSG00000024248.15	ENSMUST00000167741.9	1129	4	0	204	0	-204	multi-exon	TRUE	canonical	NA	NA	NA	NA	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATAGCAACCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	83821759	83809566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_83810167_83811359_83811429_83811528_83811658_83821632
ENSMUSG00000024248.15_83809671_83821759_1	chr17	-	752	3	FSM	ENSMUSG00000024248.15	ENSMUST00000025095.9	1076	3	0	324	0	-308	multi-exon	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGTGATTGAGGAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	83821759	83809670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_83810167_83811528_83811658_83821632
ENSMUSG00000024258.5_31922212_31925073_1	chr18	+	267	2	ISM	ENSMUSG00000024258.5	ENSMUST00000234146.2	706	3	-1	4469	0	-4469	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTACTAAACAGACGTT	NA	NA	NA	NA	NA	NA	NA	NA	31922211	31925073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31922298_31924892
ENSMUSG00000024258.5_31924951_31929122_1	chr18	+	239	3	ISM	ENSMUSG00000024258.5	ENSMUST00000025106.5	1015	4	2739	632	2738	-420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGAGCTGCAGCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	31924950	31929122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31925074_31928340_31928437_31929102
ENSMUSG00000024258.5_31928338_31929242_1	chr18	+	239	2	ISM	ENSMUSG00000024258.5	ENSMUST00000025106.5	1015	4	6126	512	6125	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAGGAACATTGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	31928337	31929242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31928437_31929102
ENSMUSG00000024260.15_31780139_31799990_1	chr18	+	984	8	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	11107	56126	11107	-56124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTGTTACCATGACAATG	NA	NA	NA	NA	NA	NA	NA	NA	31780138	31799990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957
ENSMUSG00000024260.15_31780271_31807468_1	chr18	+	985	9	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	11239	48648	11239	-48646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGGAGTAGCCTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	31780270	31807468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407
ENSMUSG00000024260.15_31781217_31810432_1	chr18	+	1001	9	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	12185	45684	12185	-45682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTCTTGCCAACTTACC	NA	NA	NA	NA	NA	NA	NA	NA	31781216	31810432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408
ENSMUSG00000024260.15_31781281_31810495_1	chr18	+	1000	9	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	12249	45621	12249	-45619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGCTCTGTGTCCACTA	NA	NA	NA	NA	NA	NA	NA	NA	31781280	31810495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408
ENSMUSG00000024260.15_31782641_31813485_1	chr18	+	991	9	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	13609	42631	13609	-42629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTGAACCCCATGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	31782640	31813485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421
ENSMUSG00000024260.15_31783586_31813590_1	chr18	+	985	8	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	14554	42526	14554	-42524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGGACATCAGGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	31783585	31813590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421
ENSMUSG00000024260.15_31783626_31813660_1	chr18	+	1015	8	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	14594	42456	14594	-42454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGGGGCTTCAGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	31783625	31813660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421
ENSMUSG00000024260.15_31799490_31815237_1	chr18	+	993	7	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	30458	40879	30458	-40877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGCCTCCGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	31799489	31815237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059
ENSMUSG00000024260.15_31799711_31831665_1	chr18	+	1010	7	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	30679	24451	30679	-24449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTTGCTGTCCCTCCGAC	NA	NA	NA	NA	NA	NA	NA	NA	31799710	31831665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31831574
ENSMUSG00000024260.15_31800029_31831804_1	chr18	+	1009	6	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	30997	24312	30997	-24310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCTGCCACACCAACG	NA	NA	NA	NA	NA	NA	NA	NA	31800028	31831804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31831574
ENSMUSG00000024260.15_31807452_31831866_1	chr18	+	993	5	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	38420	24250	38420	-24248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTGTTCCTGAGATCAA	NA	NA	NA	NA	NA	NA	NA	NA	31807451	31831866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31831574
ENSMUSG00000024260.15_31810462_31844331_1	chr18	+	990	5	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	41430	11785	41430	-11783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCACCTGGTGCCTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	31810461	31844331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31810531_31813421_31813725_31815059_31815238_31831574_31831934_31844250
ENSMUSG00000024260.15_31813419_31844499_1	chr18	+	1092	4	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	44387	11617	44387	-11615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGCAGTAAGAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	31813418	31844499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31813725_31815059_31815238_31831574_31831934_31844250
ENSMUSG00000024260.15_31813549_31844685_1	chr18	+	986	5	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	44517	11431	44517	-11429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCGACCCAGACCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	31813548	31844685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31813725_31815059_31815238_31831574_31831934_31844250_31844500_31844661
ENSMUSG00000024260.15_31815142_31853759_1	chr18	+	984	6	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	46110	2357	46110	-2355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTATCCCAAAGAAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	31815141	31853759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31815238_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709
ENSMUSG00000024260.15_31831657_31855334_1	chr18	+	980	6	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	62625	782	62625	-780	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGACGGTCAAGAAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	31831656	31855334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ENSMUSG00000024260.15_31831717_31855394_1	chr18	+	980	6	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	62685	722	62685	-720	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGACTCGGAAACAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	31831716	31855394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ENSMUSG00000024260.15_31831763_31855454_1	chr18	+	994	6	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	62731	662	62731	-660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTTTGCTACTTTGACA	NA	NA	NA	NA	NA	NA	NA	NA	31831762	31855454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ENSMUSG00000024260.15_31844294_31855658_1	chr18	+	984	5	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	75262	458	75262	-456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGCCCATAGACTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	31844293	31855658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ENSMUSG00000024260.15_31844324_31855757_1	chr18	+	1053	5	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	75292	359	75292	-357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAAAACCTCTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	31844323	31855757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ENSMUSG00000024260.15_31844413_31855780_1	chr18	+	987	5	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	75381	336	75381	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCACTTCTCCTGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	31844412	31855780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ENSMUSG00000024260.15_31844685_31855904_1	chr18	+	1001	4	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	75653	212	75653	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACCATTTCCAAGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	31844684	31855904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31844788_31848393_31848498_31853709_31853824_31855224
ENSMUSG00000024260.15_31844737_31855960_1	chr18	+	1005	4	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	75705	156	75705	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTGTGGAGGTTGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	31844736	31855960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31844788_31848393_31848498_31853709_31853824_31855224
ENSMUSG00000024260.15_31848449_31856114_1	chr18	+	1053	3	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	79417	2	79417	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGAGCAGTTTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	31848448	31856114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31848498_31853709_31853824_31855224
ENSMUSG00000024269.12_25271600_25273551_1	chr18	-	646	2	ISM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	28513	2506	28200	-2506	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTTCAGCTATGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	25273551	25271599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_25272197_25273502
ENSMUSG00000024269.12_25271736_25274603_1	chr18	-	648	3	ISM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	27461	2642	27148	-2642	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTAACTTCTTAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	25274603	25271735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_25272197_25273502_25273664_25274577
ENSMUSG00000024269.12_25271853_25282220_1	chr18	-	672	4	ISM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	19844	2759	19531	-2759	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACGATCACACTGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	25282220	25271852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170
ENSMUSG00000024269.12_25272004_25284318_1	chr18	-	662	5	ISM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	17746	2910	17433	-2910	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCCTACCACAGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	25284318	25272003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256
ENSMUSG00000024269.12_25272134_25301615_1	chr18	-	670	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	449	3040	136	-3040	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTGTGAACAAGCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	25301615	25272133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
ENSMUSG00000024269.12_25273577_25301751_1	chr18	-	669	6	ISM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	313	4483	0	-4483	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCATCACCCACCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	25301751	25273576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
ENSMUSG00000024269.12_25273630_25301775_1	chr18	-	640	6	ISM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	289	4536	-24	-4536	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCATTATACTGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	25301775	25273629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
ENSMUSG00000024270.12_24712938_24730889_1	chr18	-	2262	7	ISM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	5985	0	5985	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTGTTCTCTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	24730889	24712937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799
ENSMUSG00000024270.12_24712938_24730928_1	chr18	-	2301	7	ISM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	5946	0	5946	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTGTTCTCTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	24730928	24712937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799
ENSMUSG00000024270.12_24713117_24732322_1	chr18	-	2199	8	ISM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	4552	179	4552	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATATTTTGACTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	24732322	24713116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286
ENSMUSG00000024270.12_24713232_24732477_1	chr18	-	2239	8	ISM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	4397	294	4397	-294	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTTCACCATGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	24732477	24713231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286
ENSMUSG00000024270.12_24713915_24734515_1	chr18	-	2193	9	ISM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	2359	977	2359	-977	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTTCATATGCTGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	24734515	24713914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871
ENSMUSG00000024270.12_24713990_24734557_1	chr18	-	2160	9	ISM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	2317	1052	2317	-1052	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTAATTAGGTTCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	24734557	24713989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871
ENSMUSG00000024270.12_24714041_24734636_1	chr18	-	2188	9	ISM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	2238	1103	2238	-1103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTATGTTACTCATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	24734636	24714040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871
ENSMUSG00000024270.12_24715365_24736350_1	chr18	-	2170	9	ISM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	524	2427	524	-2427	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAGTCGAGGGCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	24736350	24715364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
ENSMUSG00000024270.12_24718297_24736874_1	chr18	-	2299	7	ISM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	0	5359	0	-5359	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCAGCGCTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	24736874	24718296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
ENSMUSG00000024271.9_24737042_24752212_1	chr18	+	977	10	ISM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	24	20352	22	-13727	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGGGGTTTGGTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	24737041	24752212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134
ENSMUSG00000024271.9_24739951_24752501_1	chr18	+	878	10	ISM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	2933	20063	2931	-13438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACCATGATCATCGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	24739950	24752501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438
ENSMUSG00000024271.9_24744985_24755187_1	chr18	+	871	9	ISM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	7967	17377	19	-10752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGATGTGGGATCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	24744984	24755187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135
ENSMUSG00000024271.9_24745021_24764521_1	chr18	+	1318	13	ISM	ENSMUSG00000024271.9	ENST00000542824.5	1584	14	55	1418	55	-1418	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTGATGACAAGTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	24745020	24764521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24745127_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415
ENSMUSG00000024271.9_24745035_24755243_1	chr18	+	877	9	ISM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	8017	17321	69	-10696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGCCTTTTCGCTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	24745034	24755243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135
ENSMUSG00000024271.9_24745038_24764608_1	chr18	+	1513	14	NNC	ENSMUSG00000024271.9	novel	1716	15	NA	NA	72	-1331	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCAGCCCGTGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	24745037	24764608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_24745127_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752445_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415
ENSMUSG00000024271.9_24745038_24765859_1	chr18	+	1564	15	FSM	ENSMUSG00000024271.9	ENST00000351393.10	1716	15	72	80	72	-80	multi-exon	FALSE	canonical	NA	NA	NA	NA	1754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATAGTAGAATCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	24745037	24765859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_24745127_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815
ENSMUSG00000024271.9_24745038_24765859_2	chr18	+	1559	15	NNC	ENSMUSG00000024271.9	novel	1716	15	NA	NA	72	-80	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATAGTAGAATCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	24745037	24765859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_24745127_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755720_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815
ENSMUSG00000024271.9_24745087_24755294_1	chr18	+	876	9	ISM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	8069	17270	121	-10645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGATGTCTTCCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	24745086	24755294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135
ENSMUSG00000024271.9_24745518_24755589_1	chr18	+	877	9	ISM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	8500	16975	552	-10350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCGATGATTGATCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	24745517	24755589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535
ENSMUSG00000024271.9_24748261_24765859_1	chr18	+	1235	12	ISM	ENSMUSG00000024271.9	ENST00000542824.5	1584	14	3295	80	3295	-80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATAGTAGAATCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	24748260	24765859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815
ENSMUSG00000024271.9_24755245_24767470_1	chr18	+	920	9	ISM	ENSMUSG00000024271.9	ENSMUST00000025120.8	2497	19	18225	4397	10279	1531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGGCAGTTCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	24755244	24767470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395
ENSMUSG00000024271.9_24755566_24767980_1	chr18	+	922	9	ISM	ENSMUSG00000024271.9	ENSMUST00000025120.8	2497	19	18546	3887	10600	2041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGGGAAGATTTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	24755565	24767980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957
ENSMUSG00000024271.9_24755633_24768023_1	chr18	+	898	9	ISM	ENSMUSG00000024271.9	ENSMUST00000025120.8	2497	19	18613	3844	10667	2084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATCAATGACTGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	24755632	24768023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957
ENSMUSG00000024271.9_24755699_24768060_1	chr18	+	869	9	ISM	ENSMUSG00000024271.9	ENSMUST00000025120.8	2497	19	18679	3807	10733	2121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGTATTTTCTCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	24755698	24768060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957
ENSMUSG00000024271.9_24758598_24771526_1	chr18	+	895	9	ISM	ENSMUSG00000024271.9	ENSMUST00000025120.8	2497	19	21578	341	13632	-341	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACCGAGCAGAGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	24758597	24771526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ENSMUSG00000024271.9_24764479_24771867_1	chr18	+	911	5	ISM	ENSMUSG00000024271.9	ENSMUST00000025120.8	2497	19	27459	0	19513	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	24764478	24771867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ENSMUSG00000024271.9_24764548_24771882_1	chr18	+	857	5	ISM	ENSMUSG00000024271.9	ENSMUST00000025120.8	2497	19	27528	-15	19582	15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTATGTTGAGTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	24764547	24771882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ENSMUSG00000024271.9_24765887_24772056_1	chr18	+	899	4	ISM	ENSMUSG00000024271.9	ENSMUST00000025120.8	2497	19	28867	-189	20921	189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGGAAAGCCTGTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	24765886	24772056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24765938_24767395_24767530_24767957_24768066_24771450
ENSMUSG00000024271.9_24767502_24772178_1	chr18	+	864	3	ISM	ENSMUSG00000024271.9	ENSMUST00000025120.8	2497	19	30482	-311	22536	311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGATCCTGCCTCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	24767501	24772178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24767530_24767957_24768066_24771450
ENSMUSG00000024283.16_7910601_7918503_1	chr18	+	664	4	ISM	ENSMUSG00000024283.16	ENST00000679398.1	3450	14	41100	9109	41100	-7636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAGCACACCTCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	7910600	7918503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_7910825_7916051_7916298_7917552_7917676_7918432
ENSMUSG00000024283.16_7910724_7920200_1	chr18	+	688	5	ISM	ENSMUSG00000024283.16	ENST00000679398.1	3450	14	41223	7412	41223	-5939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGCAGAGCCATGATCC	NA	NA	NA	NA	NA	NA	NA	NA	7910723	7920200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131
ENSMUSG00000024283.16_7921534_7926564_1	chr18	+	698	3	ISM	ENSMUSG00000024283.16	ENSMUST00000172018.8	1965	14	52033	-425	52033	59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCGCCAGGTGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	7921533	7926564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_7921609_7921855_7921984_7926069
ENSMUSG00000024283.16_7921951_7926725_1	chr18	+	689	2	ISM	ENSMUSG00000024283.16	ENSMUST00000172018.8	1965	14	52450	-586	52450	220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAAGTCCCTTGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	7921950	7926725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_7921984_7926069
ENSMUSG00000024286.9_9315846_9332916_1	chr18	-	1123	3	ISM	ENSMUSG00000024286.9	ENSMUST00000234102.2	2505	9	117054	545	117054	-545	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAATAGCAGGATTAACT	NA	NA	NA	NA	NA	NA	NA	NA	9332916	9315845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_9316673_9319408_9319572_9332783
ENSMUSG00000024286.9_9316493_9449728_1	chr18	-	1146	10	FSM	ENSMUSG00000024286.9	ENSMUST00000053917.6	5757	10	422	4189	242	-1192	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGTGGTTTTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	9449728	9316492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9449517
ENSMUSG00000024287.9_9957906_9993616_1	chr18	+	2261	21	FSM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	0	1873	0	-1873	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTCCTTTCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	9957905	9993616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ENSMUSG00000024287.9_9958163_9993725_1	chr18	+	2113	21	FSM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	257	1764	257	-1764	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	9958162	9993725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ENSMUSG00000024287.9_9959120_9993849_1	chr18	+	2131	20	ISM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	1214	1640	1214	-1640	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGAAGTTAAATGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	9959119	9993849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ENSMUSG00000024287.9_9962439_9994142_1	chr18	+	2178	17	ISM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	4533	1347	4533	-1347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGTCTAAGACCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	9962438	9994142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ENSMUSG00000024287.9_9970255_9994462_1	chr18	+	2217	13	ISM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	12349	1027	12349	-1027	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGGCAAGTTCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	9970254	9994462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ENSMUSG00000024287.9_9977845_9994630_1	chr18	+	2204	11	ISM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	19939	859	19939	-859	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTTTTCTTAATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	9977844	9994630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ENSMUSG00000024287.9_9984475_9994750_1	chr18	+	2149	10	ISM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	26569	739	26569	-739	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACACTGAATCCCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	9984474	9994750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ENSMUSG00000024287.9_9984475_9994805_1	chr18	+	2204	10	ISM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	26569	684	26569	-684	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTCCATGTTTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	9984474	9994805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ENSMUSG00000024287.9_9987145_9995103_1	chr18	+	2178	6	ISM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	29239	386	29239	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATTAATAAACAATACTCT	NA	NA	NA	NA	NA	NA	NA	NA	9987144	9995103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ENSMUSG00000024287.9_9992216_9995341_1	chr18	+	2157	3	ISM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	34310	148	34310	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTATTAGCCATTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	9992215	9995341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_9992276_9992831_9992908_9993320
ENSMUSG00000024287.9_9992778_9995489_1	chr18	+	2299	2	ISM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	34872	0	34872	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTGTTTACACATTATG	NA	NA	NA	NA	NA	NA	NA	NA	9992777	9995489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_9992908_9993320
ENSMUSG00000024293.17_10566630_10572045_1	chr18	-	1108	2	ISM	ENSMUSG00000024293.17	ENSMUST00000145320.2	2249	11	38064	0	38062	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGCTTTTTCTAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	10572045	10566629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_10567647_10571954
ENSMUSG00000024293.17_10567463_10593832_1	chr18	-	1116	9	ISM	ENSMUSG00000024293.17	ENST00000269214.10	4331	11	16275	863	16275	-833	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAAGGAATTGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	10593832	10567462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745
ENSMUSG00000024293.17_10567532_10593881_1	chr18	-	1096	9	ISM	ENSMUSG00000024293.17	ENST00000269214.10	4331	11	16226	932	16226	-902	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATTTTATCAATGGACA	NA	NA	NA	NA	NA	NA	NA	NA	10593881	10567531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745
ENSMUSG00000024293.17_10571995_10594049_1	chr18	-	1109	8	ISM	ENSMUSG00000024293.17	ENST00000269214.10	4331	11	16058	5395	16058	-5365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGGAAGAAGATAGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	10594049	10571994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745
ENSMUSG00000024293.17_10574908_10594202_1	chr18	-	1081	7	ISM	ENSMUSG00000024293.17	ENST00000269214.10	4331	11	15905	8308	15905	-8278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTGCCTAATTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	10594202	10574907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745
ENSMUSG00000024293.17_10574908_10594246_1	chr18	-	1125	7	ISM	ENSMUSG00000024293.17	ENST00000269214.10	4331	11	15861	8308	15861	-8278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTGCCTAATTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	10594246	10574907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745
ENSMUSG00000024293.17_10577041_10594369_1	chr18	-	1097	6	ISM	ENSMUSG00000024293.17	ENST00000269214.10	4331	11	15738	10441	15738	-10411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTTCTTCCTGAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	10594369	10577040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745
ENSMUSG00000024293.17_10582094_10594479_1	chr18	-	1118	5	ISM	ENSMUSG00000024293.17	ENST00000269214.10	4331	11	15628	15494	15628	-15464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCCACAACCAGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	10594479	10582093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745
ENSMUSG00000024293.17_10582146_10594538_1	chr18	-	1125	5	ISM	ENSMUSG00000024293.17	ENST00000269214.10	4331	11	15569	15546	15569	-15516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGAATGCTCTATACAG	NA	NA	NA	NA	NA	NA	NA	NA	10594538	10582145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745
ENSMUSG00000024293.17_10588519_10594863_1	chr18	-	1150	2	ISM	ENSMUSG00000024293.17	ENST00000269214.10	4331	11	15244	21919	15244	-21889	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTAATCCATTAGAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	10594863	10588518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_10588551_10593745
ENSMUSG00000024293.17_10594867_10596429_1	chr18	-	1100	2	ISM	ENSMUSG00000024293.17	ENSMUST00000145320.2	2249	11	13680	28237	13678	-28237	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTCATGGTCAAATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	10596429	10594866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_10595876_10596338
ENSMUSG00000024293.17_10595034_10610065_1	chr18	-	1109	3	ISM	ENSMUSG00000024293.17	ENST00000269214.10	4331	11	42	28434	42	-28404	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAGTAACTTTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	10610065	10595033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_10595876_10596338_10596562_10610021
ENSMUSG00000024302.17_23548534_23791729_1	chr18	+	2376	20	FSM	ENSMUSG00000024302.17	ENST00000598334.5	3146	20	3	767	0	-767	multi-exon	FALSE	canonical	NA	NA	NA	NA	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGGGTTTTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	23548533	23791729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_23548683_23608172_23608300_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779344_23779944_23780111_23784572_23784706_23791661
ENSMUSG00000024302.17_23548567_23737167_1	chr18	+	1475	12	FSM	ENSMUSG00000024302.17	ENSMUST00000047954.15	1596	12	0	121	0	-121	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTTCCCTGTGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	23548566	23737167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_23548683_23608172_23608300_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23737021
ENSMUSG00000024302.17_23548567_23791781_1	chr18	+	2395	20	FSM	ENSMUSG00000024302.17	ENST00000598334.5	3146	20	36	715	0	-715	multi-exon	FALSE	canonical	NA	NA	NA	NA	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGGGGCCTGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	23548566	23791781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_23548683_23608172_23608300_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779344_23779944_23780111_23784572_23784706_23791661
ENSMUSG00000024302.17_23548567_23791833_1	chr18	+	2447	20	FSM	ENSMUSG00000024302.17	ENST00000598334.5	3146	20	36	663	0	-663	multi-exon	FALSE	canonical	NA	NA	NA	NA	1475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGTTCAACTGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	23548566	23791833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_23548683_23608172_23608300_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779344_23779944_23780111_23784572_23784706_23791661
ENSMUSG00000024302.17_23608172_23737288_1	chr18	+	1481	11	ISM	ENSMUSG00000024302.17	ENSMUST00000047954.15	1596	12	59605	0	59605	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTCTGAGTGGGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	23608171	23737288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_23608300_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23737021
ENSMUSG00000024302.17_23608172_23791944_1	chr18	+	2443	19	ISM	ENSMUSG00000024302.17	ENST00000598334.5	3146	20	59641	552	59605	-552	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCTCCCCACAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	23608171	23791944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_23608300_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779344_23779944_23780111_23784572_23784706_23791661
ENSMUSG00000024302.17_23702745_23792300_1	chr18	+	2396	16	ISM	ENSMUSG00000024302.17	ENST00000598334.5	3146	20	154214	196	-27746	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAGATACTGTAAATATG	NA	NA	NA	NA	NA	NA	NA	NA	23702744	23792300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779344_23779944_23780111_23784572_23784706_23791661
ENSMUSG00000024302.17_23702783_23792332_1	chr18	+	2390	16	ISM	ENSMUSG00000024302.17	ENST00000598334.5	3146	20	154252	164	-27708	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGCTCACATTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	23702782	23792332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779344_23779944_23780111_23784572_23784706_23791661
ENSMUSG00000024302.17_23716165_23792443_1	chr18	+	2427	15	ISM	ENSMUSG00000024302.17	ENST00000598334.5	3146	20	167634	53	-14326	-53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGCATTCATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	23716164	23792443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779344_23779944_23780111_23784572_23784706_23791661
ENSMUSG00000024302.17_23730497_23766733_1	chr18	+	1059	7	FSM	ENSMUSG00000024302.17	ENST00000683876.1	1667	7	6	602	6	-602	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTAGTTCAGCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	23730496	23766733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23766274
ENSMUSG00000024302.17_23730538_23766793_1	chr18	+	1078	7	FSM	ENSMUSG00000024302.17	ENST00000683876.1	1667	7	47	542	47	-542	multi-exon	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATAAATCCCCTGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	23730537	23766793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23766274
ENSMUSG00000024302.17_23730595_23766837_1	chr18	+	1065	7	FSM	ENSMUSG00000024302.17	ENST00000683876.1	1667	7	104	498	104	-498	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGCTCATAGATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	23730594	23766837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23766274
ENSMUSG00000024302.17_23735695_23766947_1	chr18	+	1107	6	ISM	ENSMUSG00000024302.17	ENST00000683876.1	1667	7	5204	388	5204	-388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAGGCAACTTTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	23735694	23766947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23766274
ENSMUSG00000024304.15_16722835_16734744_1	chr18	-	642	2	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	68382	755	68382	-755	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAACCCACTTTTGTTACA	NA	NA	NA	NA	NA	NA	NA	NA	16734744	16722834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16723411_16734678
ENSMUSG00000024304.15_16722983_16755229_1	chr18	-	638	3	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	47897	903	47897	-903	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCACTGGGATTTATG	NA	NA	NA	NA	NA	NA	NA	NA	16755229	16722982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16723411_16734678_16734844_16755184
ENSMUSG00000024304.15_16723034_16755291_1	chr18	-	649	3	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	47835	954	47835	-954	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATACTGTCTGGAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	16755291	16723033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16723411_16734678_16734844_16755184
ENSMUSG00000024304.15_16723149_16757277_1	chr18	-	637	4	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	45849	1069	45849	-1069	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAGCATACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	16757277	16723148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16723411_16734678_16734844_16755184_16755325_16757207
ENSMUSG00000024304.15_16723204_16757331_1	chr18	-	636	4	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	45795	1124	45795	-1124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCAGGACGGACTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	16757331	16723203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16723411_16734678_16734844_16755184_16755325_16757207
ENSMUSG00000024304.15_16723372_16757834_1	chr18	-	636	5	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	45292	1292	45292	-1292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTCCCTCTTAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	16757834	16723371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16723411_16734678_16734844_16755184_16755325_16757207_16757442_16757776
ENSMUSG00000024304.15_16734734_16757954_1	chr18	-	662	4	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	45172	12654	45172	-12654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCCGATCCGCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	16757954	16734733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16734844_16755184_16755325_16757207_16757442_16757776
ENSMUSG00000024304.15_16734801_16757993_1	chr18	-	634	4	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	45133	12721	45133	-12721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGCCATCAAGCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	16757993	16734800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16734844_16755184_16755325_16757207_16757442_16757776
ENSMUSG00000024304.15_16755199_16760664_1	chr18	-	634	4	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	42462	33119	42462	-33119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGAAGACCAGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	16760664	16755198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16755325_16757207_16757442_16757776_16758011_16760624
ENSMUSG00000024304.15_16755306_16760767_1	chr18	-	630	4	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	42359	33226	42359	-33226	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGGATGAAACGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	16760767	16755305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16755325_16757207_16757442_16757776_16758011_16760624
ENSMUSG00000024304.15_16757264_16762600_1	chr18	-	640	4	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	40526	35184	40526	-35184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCTTGGCACGGGCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	16762600	16757263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16757442_16757776_16758011_16760624_16760768_16762515
ENSMUSG00000024304.15_16757368_16762715_1	chr18	-	651	4	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	40411	35288	40411	-35288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGGGAATCCCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	16762715	16757367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16757442_16757776_16758011_16760624_16760768_16762515
ENSMUSG00000024304.15_16757793_16765287_1	chr18	-	642	4	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	37839	35713	37839	-35713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAACCGGCTTAATGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	16765287	16757792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16758011_16760624_16760768_16762515_16762770_16765260
ENSMUSG00000024304.15_16757842_16765343_1	chr18	-	649	4	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	37783	35762	37783	-35762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTTTGATCTTCCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	16765343	16757841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16758011_16760624_16760768_16762515_16762770_16765260
ENSMUSG00000024304.15_16757917_16765410_1	chr18	-	641	4	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	37716	35837	37716	-35837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGAAACTCCAGAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	16765410	16757916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16758011_16760624_16760768_16762515_16762770_16765260
ENSMUSG00000024304.15_16762556_16773590_1	chr18	-	650	4	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	29536	40476	29536	-40476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCAGGACCCCGATCGA	NA	NA	NA	NA	NA	NA	NA	NA	16773590	16762555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16762770_16765260_16765447_16766064_16766203_16773478
ENSMUSG00000024304.15_16762697_16777055_1	chr18	-	639	5	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	26071	40617	26071	-40617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCAGCACCCACCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	16777055	16762696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16762770_16765260_16765447_16766064_16766203_16773478_16773652_16776986
ENSMUSG00000024304.15_16765343_16779611_1	chr18	-	643	5	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	23515	43263	23515	-43263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGTGGTGGAGACCCTA	NA	NA	NA	NA	NA	NA	NA	NA	16779611	16765342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16765447_16766064_16766203_16773478_16773652_16776986_16777132_16779528
ENSMUSG00000024304.15_16766116_16781630_1	chr18	-	648	5	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	21496	44036	21496	-44036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACGGTGACAGATGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	16781630	16766115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16766203_16773478_16773652_16776986_16777132_16779528_16779685_16781543
ENSMUSG00000024304.15_16766190_16781690_1	chr18	-	634	5	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	21436	44110	21436	-44110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACGTTAATAATTCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	16781690	16766189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16766203_16773478_16773652_16776986_16777132_16779528_16779685_16781543
ENSMUSG00000024304.15_16773572_16783437_1	chr18	-	637	5	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	19689	51492	19689	-51492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGGCGCCCAGCACACC	NA	NA	NA	NA	NA	NA	NA	NA	16783437	16773571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16773652_16776986_16777132_16779528_16779685_16781543_16781691_16783328
ENSMUSG00000024304.15_16773632_16783500_1	chr18	-	640	5	ISM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	19626	51552	19626	-51552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCCATTGATGCGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	16783500	16773631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16773652_16776986_16777132_16779528_16779685_16781543_16781691_16783328
ENSMUSG00000024304.15_16777086_16907638_1	chr18	-	650	5	ISM	ENSMUSG00000024304.15	ENSMUST00000025166.14	4843	16	34665	55152	34665	-55006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTGACATTGTCATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	16907638	16777085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16777132_16779528_16779685_16781543_16781691_16783328_16783556_16907564
ENSMUSG00000024304.15_16779610_16941519_1	chr18	-	689	5	ISM	ENSMUSG00000024304.15	ENSMUST00000025166.14	4843	16	784	57676	784	-57530	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATCTTCATTATCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	16941519	16779609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16779685_16781543_16781691_16783328_16783556_16907564_16907677_16941391
ENSMUSG00000024304.15_16783411_16941773_1	chr18	-	639	3	ISM	ENSMUSG00000024304.15	ENSMUST00000025166.14	4843	16	530	61477	530	-61331	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAGACAAAGAAACCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	16941773	16783410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16783556_16907564_16907677_16941391
ENSMUSG00000024304.15_16783469_16941826_1	chr18	-	634	3	ISM	ENSMUSG00000024304.15	ENSMUST00000025166.14	4843	16	477	61535	477	-61389	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCTGTGAGAAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	16941826	16783468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_16783556_16907564_16907677_16941391
ENSMUSG00000024308.16_34138611_34145327_1	chr17	+	1007	4	NNC	ENSMUSG00000024308.16	novel	2589	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCCTGGGGAACATCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	34138610	34145327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_34138699_34138850_34139025_34144383_34144783_34144981
ENSMUSG00000024308.16_34138611_34145327_2	chr17	+	1006	4	NNC	ENSMUSG00000024308.16	novel	2589	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	810	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCCTGGGGAACATCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	34138610	34145327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_34138699_34138844_34139018_34144383_34144783_34144981
ENSMUSG00000024308.16_34138611_34145327_3	chr17	+	1013	4	FSM	ENSMUSG00000024308.16	ENST00000489157.5	1063	4	52	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCCTGGGGAACATCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	34138610	34145327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_34138699_34138844_34139025_34144383_34144783_34144981
ENSMUSG00000024308.16_34138936_34144564_1	chr17	+	531	3	ISM	ENSMUSG00000024308.16	ENSMUST00000234247.2	2589	8	325	3701	325	-761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGCTGCCACCCCCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	34138935	34144564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34139025_34139222_34139484_34144383
ENSMUSG00000024308.16_34139424_34145029_1	chr17	+	507	3	ISM	ENSMUSG00000024308.16	ENSMUST00000234247.2	2589	8	813	3236	813	-296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGAGGCACCCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	34139423	34145029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34139484_34144383_34144783_34144981
ENSMUSG00000024308.16_34144754_34145650_1	chr17	+	511	4	ISM	ENSMUSG00000024308.16	ENSMUST00000025161.10	2898	8	6448	2616	6143	325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCCTGACCATTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	34144753	34145650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34144783_34144981_34145324_34145401_34145492_34145600
ENSMUSG00000024308.16_34145092_34147250_1	chr17	+	539	4	ISM	ENSMUSG00000024308.16	ENSMUST00000025161.10	2898	8	6786	1016	6481	-1015	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTTTTTGTTTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	34145091	34147250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34145324_34145401_34145492_34145600_34145681_34147113
ENSMUSG00000024308.16_34145426_34147471_1	chr17	+	504	3	ISM	ENSMUSG00000024308.16	ENSMUST00000025161.10	2898	8	7120	795	6815	-794	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATAGTCCCGGCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	34145425	34147471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34145492_34145600_34145681_34147113
ENSMUSG00000024309.16_34157795_34159139_1	chr17	-	629	4	FSM	ENSMUSG00000024309.16	ENSMUST00000025163.14	807	4	178	0	145	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGATTCTGTTTTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	34159139	34157794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997
ENSMUSG00000024309.16_34157920_34159373_1	chr17	-	597	5	NNC	ENSMUSG00000024309.16	novel	560	5	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGCCAATAAAATGTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	34159373	34157919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997_34159130_34159270
ENSMUSG00000024309.16_34157920_34159373_2	chr17	-	592	5	NNC	ENSMUSG00000024309.16	novel	611	5	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGCCAATAAAATGTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	34159373	34157919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_34158086_34158512_34158638_34158721_34158786_34158997_34159140_34159278
ENSMUSG00000024309.16_34157920_34159373_3	chr17	-	592	5	NNC	ENSMUSG00000024309.16	novel	611	5	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGCCAATAAAATGTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	34159373	34157919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997_34159140_34159285
ENSMUSG00000024309.16_34157920_34159373_4	chr17	-	599	5	FSM	ENSMUSG00000024309.16	ENST00000395131.5	611	5	19	-7	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGCCAATAAAATGTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	34159373	34157919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997_34159140_34159278
ENSMUSG00000024309.16_34157920_34159373_5	chr17	-	593	5	NNC	ENSMUSG00000024309.16	novel	611	5	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1810	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGCCAATAAAATGTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	34159373	34157919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997_34159134_34159278
ENSMUSG00000024312.11_34159691_34160434_1	chr17	+	433	4	ISM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	57	8237	57	-8237	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGAGGCAAGCGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	34159690	34160434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34159781_34159858_34160066_34160165_34160247_34160379
ENSMUSG00000024312.11_34159951_34160833_1	chr17	+	435	5	ISM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	317	7838	317	-7838	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAATTACTCTCGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	34159950	34160833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34160066_34160165_34160247_34160379_34160493_34160606_34160695_34160795
ENSMUSG00000024312.11_34160189_34162399_1	chr17	+	401	5	ISM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	555	6272	555	-6272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGAAGCAGTACGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	34160188	34162399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34160247_34160379_34160493_34160606_34160695_34160795_34160858_34162319
ENSMUSG00000024312.11_34162545_34167215_1	chr17	+	396	4	ISM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	2911	1456	2911	-1456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCACCAGCTGAAGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	34162544	34167215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34162683_34162774_34162911_34163455_34163556_34167193
ENSMUSG00000024312.11_34162596_34167265_1	chr17	+	395	4	ISM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	2962	1406	2962	-1406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCGGACCTTGCCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	34162595	34167265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34162683_34162774_34162911_34163455_34163556_34167193
ENSMUSG00000024312.11_34162654_34167315_1	chr17	+	387	4	ISM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	3020	1356	3020	-1356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTAGTTGCGGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	34162653	34167315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34162683_34162774_34162911_34163455_34163556_34167193
ENSMUSG00000024312.11_34162891_34167455_1	chr17	+	382	3	ISM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	3257	1216	3257	-1216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGTTGGGGGTGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	34162890	34167455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34162911_34163455_34163556_34167193
ENSMUSG00000024312.11_34167300_34168065_1	chr17	+	418	4	ISM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	7666	606	7666	-606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGCCTTTCAGCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	34167299	34168065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34167508_34167616_34167712_34167809_34167906_34168046
ENSMUSG00000024312.11_34167450_34168298_1	chr17	+	410	5	ISM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	7816	373	7816	-373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATATGGCCATGCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	34167449	34168298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34167508_34167616_34167712_34167809_34167906_34168046_34168161_34168251
ENSMUSG00000024317.16_21135152_21159394_2	chr18	+	604	5	FSM	ENSMUSG00000024317.16	ENST00000257190.9	1886	5	90	1192	90	-1192	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACAGCATGGAAAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	21135151	21159394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_21135227_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ENSMUSG00000024317.16_21153961_21159625_1	chr18	+	687	3	ISM	ENSMUSG00000024317.16	ENST00000257190.9	1886	5	18899	961	18899	-961	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGGGATAATCCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	21153960	21159625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_21154057_21157465_21157574_21159142
ENSMUSG00000024319.19_34174786_34179203_1	chr17	+	1124	9	ISM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	0	6806	0	-6806	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGATCAGGGATGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	34174785	34179203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160
ENSMUSG00000024319.19_34174919_34180106_1	chr17	+	1161	11	ISM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	133	5903	133	-5903	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAAGCAGGAACACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	34174918	34180106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084
ENSMUSG00000024319.19_34175055_34180163_1	chr17	+	1082	11	ISM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	269	5846	269	-5846	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCTGGAGGCCCCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	34175054	34180163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084
ENSMUSG00000024319.19_34175923_34180679_1	chr17	+	1109	11	ISM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	1137	5330	1137	-5330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCCGGCTGCACATGA	NA	NA	NA	NA	NA	NA	NA	NA	34175922	34180679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586
ENSMUSG00000024319.19_34177693_34181727_1	chr17	+	1062	10	ISM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	2907	4282	2907	-4282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCACTTGTCAGCATCAAC	NA	NA	NA	NA	NA	NA	NA	NA	34177692	34181727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699
ENSMUSG00000024319.19_34178253_34181971_1	chr17	+	1106	10	ISM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	3467	4038	3467	-4038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCTCGGGGTGCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	34178252	34181971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883
ENSMUSG00000024319.19_34179227_34184694_1	chr17	+	1100	11	ISM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	4441	1315	4441	-1315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCAGGATGTAATGCGA	NA	NA	NA	NA	NA	NA	NA	NA	34179226	34184694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634
ENSMUSG00000024319.19_34180085_34184947_1	chr17	+	1049	10	ISM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	5299	1062	5299	-1062	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATCCAGCTCTACCATCG	NA	NA	NA	NA	NA	NA	NA	NA	34180084	34184947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ENSMUSG00000024319.19_34180595_34185137_1	chr17	+	1097	9	ISM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	5809	872	5809	-872	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGACCCCTTTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	34180594	34185137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ENSMUSG00000024319.19_34180722_34185193_1	chr17	+	1026	9	ISM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	5936	816	5936	-816	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCATTGCCAGGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	34180721	34185193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ENSMUSG00000024319.19_34181489_34185485_1	chr17	+	1086	7	ISM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	6703	524	6703	-524	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTGGGCCTCTAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	34181488	34185485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ENSMUSG00000024319.19_34181972_34185714_1	chr17	+	1099	5	ISM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	7186	295	7186	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTCCACACAGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	34181971	34185714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ENSMUSG00000024319.19_34184667_34186009_1	chr17	+	1164	2	ISM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	9881	0	9881	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTGATTTTGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	34184666	34186009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34184754_34184932
ENSMUSG00000024325.9_34239766_34241408_1	chr17	-	1105	3	ISM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	2246	0	2246	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTAAGTAGTGAAACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	34241408	34239765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34240458_34240656_34240931_34241269
ENSMUSG00000024325.9_34240058_34242027_1	chr17	-	1139	4	ISM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	1627	292	1627	-292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTCTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	34242027	34240057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952
ENSMUSG00000024325.9_34240058_34242056_1	chr17	-	1168	4	ISM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	1598	292	1598	-292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTCTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	34242056	34240057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952
ENSMUSG00000024325.9_34240208_34242117_1	chr17	-	1079	4	ISM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	1537	442	1537	-442	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTCTATATTGGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	34242117	34240207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952
ENSMUSG00000024325.9_34240317_34242326_1	chr17	-	1081	5	ISM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	1328	551	1328	-551	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTGTCCCAGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	34242326	34240316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952_34242169_34242266
ENSMUSG00000024325.9_34240364_34242414_1	chr17	-	1122	5	ISM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	1240	598	1240	-598	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGATGTCACAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	34242414	34240363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952_34242169_34242266
ENSMUSG00000024325.9_34240802_34243626_1	chr17	-	1169	6	ISM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	28	1036	28	-1036	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGCGGACCTGATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	34243626	34240801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34240931_34241269_34241660_34241952_34242169_34242266_34242428_34243262_34243393_34243483
ENSMUSG00000024325.9_34240850_34243626_1	chr17	-	1121	6	ISM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	28	1084	28	-1084	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCAGGAAACCACAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	34243626	34240849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34240931_34241269_34241660_34241952_34242169_34242266_34242428_34243262_34243393_34243483
ENSMUSG00000024327.17_34247247_34250594_1	chr17	-	2311	7	NNC	ENSMUSG00000024327.17	novel	2320	7	NA	NA	0	-4	intron_retention	FALSE	canonical	NA	NA	NA	NA	2968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGCCTTTGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	34250594	34247246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249224_34249341_34249396_34249539_34249709_34249797
ENSMUSG00000024335.21_34330997_34336056_1	chr17	-	2794	11	ISM	ENSMUSG00000024335.21	ENSMUST00000095347.13	2617	12	1407	-340	1407	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTTTTCTTAGTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	34336056	34330996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881
ENSMUSG00000024335.21_34331113_34336065_1	chr17	-	2687	11	ISM	ENSMUSG00000024335.21	ENSMUST00000095347.13	2617	12	1398	-224	1398	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCCACTCCATTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	34336065	34331112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881
ENSMUSG00000024335.21_34331337_34337646_1	chr17	-	2650	12	ISM	ENSMUSG00000024335.21	ENSMUST00000114242.9	4483	13	3075	340	84	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGTATGGGTGGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	34337646	34331336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579
ENSMUSG00000024335.21_34331658_34337987_1	chr17	-	2670	12	ISM	ENSMUSG00000024335.21	ENSMUST00000114242.9	4483	13	2734	661	-257	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCAAGTGGCAGTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	34337987	34331657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579
ENSMUSG00000024335.21_34332353_34332998_1	chr17	-	547	2	ISM	ENSMUSG00000024335.21	ENST00000395287.5	3170	11	4732	1360	4465	-1016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTAAGCCTGGATATCAA	NA	NA	NA	NA	NA	NA	NA	NA	34332998	34332352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34332807_34332905
ENSMUSG00000024335.21_34332353_34338343_1	chr17	-	2676	10	ISM	ENSMUSG00000024335.21	ENSMUST00000114242.9	4483	13	2378	1356	267	-1016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTAAGCCTGGATATCAA	NA	NA	NA	NA	NA	NA	NA	NA	34338343	34332352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579
ENSMUSG00000024335.21_34332611_34338518_1	chr17	-	2681	9	ISM	ENSMUSG00000024335.21	ENSMUST00000114242.9	4483	13	2203	1614	92	-1274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGGTAGCAATGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	34338518	34332610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579
ENSMUSG00000024335.21_34333967_34338685_1	chr17	-	2174	6	ISM	ENSMUSG00000024335.21	ENSMUST00000114242.9	4483	13	2036	2970	-75	-2630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTACGCCTGGCCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	34338685	34333966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579
ENSMUSG00000024335.21_34334178_34338836_1	chr17	-	2114	6	ISM	ENSMUSG00000024335.21	ENSMUST00000114242.9	4483	13	1885	3181	-226	-2841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCCCCAGCTAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	34338836	34334177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579
ENSMUSG00000024335.21_34334178_34338844_1	chr17	-	2122	6	ISM	ENSMUSG00000024335.21	ENSMUST00000114242.9	4483	13	1877	3181	-234	-2841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCCCCAGCTAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	34338844	34334177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579
ENSMUSG00000024335.21_34334398_34339213_1	chr17	-	2157	6	NIC	ENSMUSG00000024335.21	novel	4566	13	NA	NA	212	-3061	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCTGGACCCCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	34339213	34334397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_-_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338958_34339168
ENSMUSG00000024335.21_34334430_34339284_1	chr17	-	2196	6	NIC	ENSMUSG00000024335.21	novel	4566	13	NA	NA	141	-3093	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATCTCTTCTCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	34339284	34334429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_-_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338958_34339168
ENSMUSG00000024335.21_34334506_34339385_1	chr17	-	2221	6	NIC	ENSMUSG00000024335.21	novel	4566	13	NA	NA	40	-3169	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGTCGCATACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	34339385	34334505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_-_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338958_34339168
ENSMUSG00000024338.16_34417344_34420256_1	chr17	+	807	6	FSM	ENSMUSG00000024338.16	ENST00000395339.7	948	6	-25	166	-25	-166	multi-exon	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCCAGCATTGGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	34417343	34420256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_34417520_34418206_34418355_34418613_34418657_34419114_34419245_34419684_34419890_34420151
ENSMUSG00000024338.16_34418290_34420424_1	chr17	+	716	5	ISM	ENSMUSG00000024338.16	ENST00000395339.7	948	6	921	-2	921	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGGGTTGTGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	34418289	34420424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34418355_34418613_34418657_34419114_34419245_34419684_34419890_34420151
ENSMUSG00000024346.7_36536729_36587577_1	chr18	-	1098	4	NNC	ENSMUSG00000024346.7	novel	1109	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTTGCCTTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	36587577	36536728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_36537514_36565358_36565444_36584143_36584300_36587505
ENSMUSG00000024349.11_35866734_35873069_1	chr18	-	2053	7	ISM	ENSMUSG00000024349.11	ENSMUST00000115728.5	2299	8	538	0	446	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGCCTAGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	35873069	35866733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35867752_35868155_35868343_35868931_35869171_35871733_35871843_35872092_35872274_35872403_35872631_35872977
ENSMUSG00000024349.11_35866952_35873548_1	chr18	-	2022	8	FSM	ENSMUSG00000024349.11	ENSMUST00000115728.5	2299	8	59	218	-16	-218	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAGGCGACAGCATGACC	NA	NA	NA	NA	NA	NA	NA	NA	35873548	35866951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_35867752_35868155_35868343_35868931_35869171_35871733_35871843_35872092_35872274_35872403_35872631_35872977_35873068_35873359
ENSMUSG00000024352.13_35793069_35795175_1	chr18	-	646	4	FSM	ENSMUSG00000024352.13	ENSMUST00000096573.4	710	4	64	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTTATCCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	35795175	35793068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_35793407_35793496_35793628_35793844_35793911_35795064
ENSMUSG00000024352.13_35793109_35793628_1	chr18	-	421	2	ISM	ENSMUSG00000024352.13	ENST00000507779.2	602	4	1553	-1	1553	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCCATTTTTCTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	35793628	35793108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35793398_35793496
ENSMUSG00000024352.13_35793240_35795175_1	chr18	-	466	4	FSM	ENSMUSG00000024352.13	ENST00000507779.2	602	4	6	130	6	-130	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCCCCGGCTGAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	35795175	35793239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_35793398_35793496_35793628_35793844_35793911_35795064
ENSMUSG00000024352.13_35793240_35795175_2	chr18	-	409	3	FSM	ENSMUSG00000024352.13	ENST00000509959.5	638	3	33	196	6	-130	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCCCCGGCTGAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	35795175	35793239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_35793407_35793496_35793628_35795064
ENSMUSG00000024357.11_35402092_35451016_1	chr18	-	384	3	ISM	ENSMUSG00000024357.11	ENSMUST00000237896.2	1501	9	180906	2643	180899	-2643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGAGTGAGTGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	35451016	35402091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35402257_35402666_35402764_35450894
ENSMUSG00000024357.11_35458416_35551143_1	chr18	-	368	4	ISM	ENSMUSG00000024357.11	ENSMUST00000025215.10	1703	10	80839	58967	80772	-58967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAGTTCAACAGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	35551143	35458415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35458529_35474150_35474251_35481692_35481814_35551109
ENSMUSG00000024357.11_35474231_35571373_1	chr18	-	334	4	ISM	ENSMUSG00000024357.11	ENSMUST00000025215.10	1703	10	60609	74782	60542	-74782	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACACATCTCAGGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	35571373	35474230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35474251_35481692_35481814_35551109_35551249_35571319
ENSMUSG00000024359.11_35070467_35076223_1	chr18	-	1855	8	ISM	ENSMUSG00000024359.11	ENST00000678051.1	2200	16	9569	-651	9569	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1958	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCGTTGTAATCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	35076223	35070466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128
ENSMUSG00000024359.11_35070726_35079619_1	chr18	-	1875	10	ISM	ENSMUSG00000024359.11	ENST00000678051.1	2200	16	6173	-392	6173	-259	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	3522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTGGATTTTTTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	35079619	35070725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548
ENSMUSG00000024359.11_35071183_35082194_1	chr18	-	1816	13	ISM	ENSMUSG00000024359.11	ENST00000678051.1	2200	16	3598	65	3598	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGTTCATACTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	35082194	35071182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069
ENSMUSG00000024359.11_35071320_35085474_1	chr18	-	1887	15	ISM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	1936	853	318	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGGGACTTCCTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	35085474	35071319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448
ENSMUSG00000024359.11_35071320_35085493_1	chr18	-	1906	15	ISM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	1917	853	299	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4533	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGGGACTTCCTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	35085493	35071319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448
ENSMUSG00000024359.11_35071749_35087242_1	chr18	-	1789	16	ISM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	168	1282	161	-631	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	2448	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGAGCGCTCCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	35087242	35071748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ENSMUSG00000024359.11_35071749_35087281_1	chr18	-	1828	16	ISM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	129	1282	122	-631	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGAGCGCTCCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	35087281	35071748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ENSMUSG00000024359.11_35071986_35087410_1	chr18	-	1928	15	ISM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	0	1519	0	-868	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2040	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACAATTCACTGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	35087410	35071985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ENSMUSG00000024359.11_35072395_35085536_1	chr18	-	1575	12	ISM	ENSMUSG00000024359.11	ENST00000678051.1	2200	16	256	1277	256	-1277	internal_fragment	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTACTTTTGCTGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	35085536	35072394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085462
ENSMUSG00000024359.11_35072446_35076194_1	chr18	-	334	4	ISM	ENSMUSG00000024359.11	ENST00000677064.1	2167	16	11213	1328	9598	-1328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGGTTAAAAATGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	35076194	35072445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35072491_35073249_35073368_35073892_35073998_35076128
ENSMUSG00000024359.11_35073240_35085794_1	chr18	-	1554	12	ISM	ENSMUSG00000024359.11	ENST00000678051.1	2200	16	-2	2122	-2	-2122	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGTAAATGATCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	35085794	35073239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085462_35085537_35085729
ENSMUSG00000024359.11_35073937_35079066_1	chr18	-	341	3	ISM	ENSMUSG00000024359.11	ENST00000677064.1	2167	16	8341	2819	6726	-2819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATGGCTGGAGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	35079066	35073936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35073998_35076128_35076339_35078996
ENSMUSG00000024359.11_35084439_35087410_1	chr18	-	355	4	ISM	ENSMUSG00000024359.11	ENST00000677064.1	2167	16	-3	13321	0	-13321	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGAACTACCCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	35087410	35084438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35084459_35085448_35085537_35085729_35085789_35087222
ENSMUSG00000024360.9_35036185_35039081_1	chr18	-	1986	2	ISM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	25979	347	25979	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGTAAATTTACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	35039081	35036184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35038124_35039034
ENSMUSG00000024360.9_35036227_35039143_1	chr18	-	2006	2	ISM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	25917	389	25917	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAAATGGGTCTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	35039143	35036226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35038124_35039034
ENSMUSG00000024360.9_35036537_35042276_1	chr18	-	2037	5	ISM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	22784	699	22784	-699	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAACCAGCTCCTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	35042276	35036536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195
ENSMUSG00000024360.9_35036629_35042289_1	chr18	-	1958	5	ISM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	22771	791	22771	-791	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATTGGGTTTCAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	35042289	35036628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195
ENSMUSG00000024360.9_35036870_35043232_1	chr18	-	2008	7	ISM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	21828	1032	21828	-1032	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAACCATGTTAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	35043232	35036869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168
ENSMUSG00000024360.9_35037012_35046661_1	chr18	-	1996	8	ISM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	18399	1174	18399	-1174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATCTCAAACCCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	35046661	35037011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606
ENSMUSG00000024360.9_35037079_35046702_1	chr18	-	1970	8	ISM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	18358	1241	18358	-1241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTTTCAAATGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	35046702	35037078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606
ENSMUSG00000024360.9_35037141_35046746_1	chr18	-	1952	8	ISM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	18314	1303	18314	-1303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCGGTGGTGTTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	35046746	35037140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606
ENSMUSG00000024360.9_35037328_35064654_1	chr18	-	1974	10	ISM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	406	1490	406	-1490	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGCCCTCTGTGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	35064654	35037327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621
ENSMUSG00000024360.9_35037445_35064949_1	chr18	-	1991	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	111	1607	111	-1607	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTGTCCCTTTCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	35064949	35037444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ENSMUSG00000024360.9_35037509_35065060_1	chr18	-	2038	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	0	1671	0	-1671	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTGAAAGGGTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	35065060	35037508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ENSMUSG00000024369.17_35069384_35073272_1	chr17	+	995	8	ISM	ENSMUSG00000024369.17	ENSMUST00000173357.8	1399	11	10	1958	0	-1958	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCTCCTCCGCGGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	35069383	35073272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196
ENSMUSG00000024369.17_35069384_35073774_1	chr17	+	1308	10	ISM	ENSMUSG00000024369.17	ENSMUST00000097343.11	1607	11	17	1571	0	-1456	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGATGAGGCTCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	35069383	35073774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35069651_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671
ENSMUSG00000024369.17_35069566_35075122_1	chr17	+	1185	11	FSM	ENSMUSG00000024369.17	ENSMUST00000097343.11	1607	11	199	223	182	-108	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGATCTATAGGAAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	35069565	35075122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35069651_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ENSMUSG00000024369.17_35069611_35075230_1	chr17	+	1248	11	FSM	ENSMUSG00000024369.17	ENSMUST00000097343.11	1607	11	244	115	227	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTCCGTCAGCCTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	35069610	35075230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35069651_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ENSMUSG00000024369.17_35069884_35075348_1	chr17	+	1323	10	NNC	ENSMUSG00000024369.17	novel	1381	11	NA	NA	500	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTATTGTAACTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	35069883	35075348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073202_35073342_35073420_35073476_35073671_35073775_35075063
ENSMUSG00000024370.18_34765827_34767719_1	chr18	-	1590	3	ISM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	17069	1091	17069	-1091	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTTGTGCATGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34767719	34765826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_34767218_34767445_34767566_34767640
ENSMUSG00000024370.18_34766008_34770147_1	chr18	-	1583	6	ISM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	14641	1272	14641	-1272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGGTATCATTTAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	34770147	34766007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111
ENSMUSG00000024370.18_34766486_34774577_1	chr18	-	1575	10	ISM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	10211	1750	10211	-1750	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTAGTTTTCCAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	34774577	34766485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525
ENSMUSG00000024370.18_34766554_34774650_1	chr18	-	1580	10	ISM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	10138	1818	10138	-1818	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATGTTACTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	34774650	34766553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525
ENSMUSG00000024370.18_34766617_34774703_1	chr18	-	1570	10	ISM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	10085	1881	10085	-1881	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCCTCAGCCTCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	34774703	34766616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525
ENSMUSG00000024370.18_34766731_34777147_1	chr18	-	1659	12	ISM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	7641	1995	7641	-1995	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAAGAACGGAGCGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	34777147	34766730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077
ENSMUSG00000024370.18_34766980_34780060_1	chr18	-	1595	14	ISM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	4728	2244	4728	-2244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGTTTTCCCAAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	34780060	34766979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954
ENSMUSG00000024370.18_34767139_34784658_1	chr18	-	1600	16	FSM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	130	2403	130	-2403	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTACCTTTTTCCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	34784658	34767138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ENSMUSG00000024376.8_33929380_33958507_1	chr18	-	1700	8	ISM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	181465	0	181465	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGGTCTCTTTACTG	NA	NA	NA	NA	NA	NA	NA	NA	33958507	33929379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459
ENSMUSG00000024376.8_33929489_33961171_1	chr18	-	1606	9	ISM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	178801	109	178801	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTAGGCTGCCTCTACAT	NA	NA	NA	NA	NA	NA	NA	NA	33961171	33929488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156
ENSMUSG00000024376.8_33929835_33987353_1	chr18	-	1599	12	ISM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	152619	455	152619	-455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCATCCTTTTCTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	33987353	33929834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288
ENSMUSG00000024376.8_33929970_33994268_1	chr18	-	1669	14	ISM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	145704	590	145704	-590	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGTGGGCTGTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	33994268	33929969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198
ENSMUSG00000024376.8_33930444_34012053_1	chr18	-	1547	18	ISM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	127919	1064	127919	-1064	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCATAAAAACCATCC	NA	NA	NA	NA	NA	NA	NA	NA	34012053	33930443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964
ENSMUSG00000024376.8_33934636_34054967_1	chr18	-	1608	19	ISM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	85005	5256	85005	-5256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTAAAGTAGAGTGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	34054967	33934635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882
ENSMUSG00000024376.8_33943321_34139159_1	chr18	-	1596	18	ISM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	813	13941	813	-13941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACCAAGCGGACCCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	34139159	33943320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037
ENSMUSG00000024376.8_33961221_34139432_1	chr18	-	1608	15	ISM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	540	31841	540	-31841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCGGCAGCGCAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	34139432	33961220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037
ENSMUSG00000024376.8_33961827_34139868_1	chr18	-	1601	15	ISM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	104	32447	104	-32447	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAAGCAAATCTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	34139868	33961826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ENSMUSG00000024376.8_33965664_34139972_1	chr18	-	1652	14	ISM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	0	36284	0	-36284	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCCAGTGAAAAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	34139972	33965663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ENSMUSG00000024378.10_33338099_33341276_1	chr18	-	167	2	FSM	ENSMUSG00000024378.10	ENST00000509887.5	171	2	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTAAAACTCTTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	33341276	33338098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_33338219_33341229
ENSMUSG00000024381.17_32510161_32568784_1	chr18	+	2138	15	FSM	ENSMUSG00000024381.17	ENST00000352848.7	2135	15	14	-17	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAGAACGAGGCGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	32510160	32568784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32556294_32556340_32557872_32558021_32564723_32564796_32565035_32565147_32565376_32565479_32568187
ENSMUSG00000024381.17_32510161_32568784_2	chr18	+	2134	15	NNC	ENSMUSG00000024381.17	novel	2135	15	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAGAACGAGGCGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	32510160	32568784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32556298_32556340_32557872_32558021_32564723_32564796_32565035_32565147_32565376_32565479_32568187
ENSMUSG00000024381.17_32510161_32568784_3	chr18	+	2131	15	NNC	ENSMUSG00000024381.17	novel	2135	15	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAGAACGAGGCGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	32510160	32568784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32556294_32556340_32557872_32558021_32564723_32564796_32565035_32565147_32565376_32565479_32568194
ENSMUSG00000024381.17_32546146_32565146_1	chr18	+	710	7	ISM	ENSMUSG00000024381.17	ENSMUST00000234496.2	1886	13	35848	3640	35836	-3197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCGTAGGCTAGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	32546145	32565146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32565035
ENSMUSG00000024381.17_32546168_32563870_1	chr18	+	870	10	ISM	ENSMUSG00000024381.17	ENST00000357970.7	2423	18	36021	4897	35858	-4473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGGCCCAGCCAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	32546167	32563870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32546244_32547235_32547344_32547997_32548091_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32562248_32562357_32562752_32562777_32563802
ENSMUSG00000024381.17_32547234_32565478_1	chr18	+	716	7	ISM	ENSMUSG00000024381.17	ENSMUST00000234496.2	1886	13	36936	3308	36924	-2865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAAGGGTGTGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	32547233	32565478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32565035_32565147_32565376
ENSMUSG00000024381.17_32547308_32568212_1	chr18	+	667	8	ISM	ENSMUSG00000024381.17	ENSMUST00000234496.2	1886	13	37010	574	36998	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGCGACTGGAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	32547307	32568212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32565035_32565147_32565376_32565479_32568187
ENSMUSG00000024381.17_32552931_32568343_1	chr18	+	727	7	ISM	ENSMUSG00000024381.17	ENSMUST00000234496.2	1886	13	42633	443	42621	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTTTCTTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	32552930	32568343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32565035_32565147_32565376_32565479_32568187
ENSMUSG00000024381.17_32552962_32568343_1	chr18	+	696	7	ISM	ENSMUSG00000024381.17	ENSMUST00000234496.2	1886	13	42664	443	42652	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTTTCTTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	32552961	32568343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32565035_32565147_32565376_32565479_32568187
ENSMUSG00000024381.17_32553155_32559349_1	chr18	+	392	5	ISM	ENSMUSG00000024381.17	ENST00000259238.8	2264	16	43008	9418	42845	-8994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTTTTTGATGACGCA	NA	NA	NA	NA	NA	NA	NA	NA	32553154	32559349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32553198_32554930_32555014_32556294_32556340_32557872_32558021_32559276
ENSMUSG00000024381.17_32557870_32568558_1	chr18	+	735	4	ISM	ENSMUSG00000024381.17	ENSMUST00000234496.2	1886	13	47572	228	47560	-209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGTTCAGGGCGGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	32557869	32568558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32558021_32565035_32565147_32565376_32565479_32568187
ENSMUSG00000024381.17_32563815_32568659_1	chr18	+	853	5	ISM	ENSMUSG00000024381.17	ENSMUST00000025239.9	2406	19	53505	125	53505	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCAGGGCCTGCACACT	NA	NA	NA	NA	NA	NA	NA	NA	32563814	32568659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32563911_32564723_32564796_32565035_32565147_32565376_32565479_32568187
ENSMUSG00000024382.14_32373353_32381484_1	chr18	+	1393	8	ISM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	0	21720	0	-21720	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTGGGGCCTCATGAT	NA	NA	NA	NA	NA	NA	NA	NA	32373352	32381484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32373475_32373682_32373889_32376016_32376254_32377851_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215
ENSMUSG00000024382.14_32373407_32381513_1	chr18	+	1368	8	ISM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	54	21691	54	-21691	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCACACCATTCCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	32373406	32381513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32373475_32373682_32373889_32376016_32376254_32377851_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215
ENSMUSG00000024382.14_32373742_32387203_1	chr18	+	1328	8	ISM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	389	16001	389	-16001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGGGAAGATGACAAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	32373741	32387203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32373889_32376016_32376254_32377851_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215_32381531_32387133
ENSMUSG00000024382.14_32373861_32387318_1	chr18	+	1324	8	ISM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	508	15886	508	-15886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTGCTCCCTGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	32373860	32387318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32373889_32376016_32376254_32377851_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215_32381531_32387133
ENSMUSG00000024382.14_32376035_32390293_1	chr18	+	1329	8	ISM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	2682	12911	2682	-12911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGAAACGGATCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	32376034	32390293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32376254_32377851_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242
ENSMUSG00000024382.14_32376100_32390344_1	chr18	+	1315	8	ISM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	2747	12860	2747	-12860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGTTTCTGATCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	32376099	32390344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32376254_32377851_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242
ENSMUSG00000024382.14_32376229_32394397_1	chr18	+	1330	9	ISM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	2876	8807	2876	-8807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTCCAGAACTTCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	32376228	32394397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32376254_32377851_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354
ENSMUSG00000024382.14_32378839_32398737_1	chr18	+	1324	8	ISM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	5486	4467	5486	-4467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTCTACCAAGCGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	32378838	32398737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670
ENSMUSG00000024382.14_32378903_32398789_1	chr18	+	1312	8	ISM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	5550	4415	5550	-4415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATTCATTTACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	32378902	32398789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670
ENSMUSG00000024382.14_32379620_32400276_1	chr18	+	1302	8	ISM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	6267	2928	6267	-2928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGCAGCTCCTGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	32379619	32400276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670_32398790_32400216
ENSMUSG00000024382.14_32379660_32400342_1	chr18	+	1328	8	ISM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	6307	2862	6307	-2862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGTTTGGCTCTAGATC	NA	NA	NA	NA	NA	NA	NA	NA	32379659	32400342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670_32398790_32400216
ENSMUSG00000024382.14_32379765_32402895_1	chr18	+	1335	9	ISM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	6412	309	6412	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGCAAGCACGTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	32379764	32402895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670_32398790_32400216_32400370_32402810
ENSMUSG00000024382.14_32381341_32403144_1	chr18	+	1399	8	ISM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	7988	60	7988	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAACTTGTTAAGAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	32381340	32403144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670_32398790_32400216_32400370_32402810
ENSMUSG00000024386.10_32256335_32260526_1	chr18	-	734	3	ISM	ENSMUSG00000024386.10	ENST00000409048.1	1349	5	7541	0	7541	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAGTTACATTGGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	32260526	32256334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_32256870_32258147_32258266_32260445
ENSMUSG00000024386.10_32256564_32266355_1	chr18	-	726	4	ISM	ENSMUSG00000024386.10	ENST00000409048.1	1349	5	1712	229	1712	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAAATGAGTGCGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	32266355	32256563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_32256870_32258147_32258266_32260445_32260592_32266199
ENSMUSG00000024386.10_32256698_32266522_1	chr18	-	759	4	ISM	ENSMUSG00000024386.10	ENST00000409048.1	1349	5	1545	363	1545	-363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGGCGCAGGAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	32266522	32256697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_32256870_32258147_32258266_32260445_32260592_32266199
ENSMUSG00000024387.14_35335176_35340149_1	chr17	-	846	7	FSM	ENSMUSG00000024387.14	ENSMUST00000025246.13	961	7	113	2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGTCTCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	35340149	35335175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340097
ENSMUSG00000024387.14_35335176_35340262_1	chr17	-	951	7	NNC	ENSMUSG00000024387.14	novel	961	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGTCTCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	35340262	35335175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_35335402_35336679_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340097
ENSMUSG00000024387.14_35335176_35340262_2	chr17	-	954	7	NNC	ENSMUSG00000024387.14	novel	961	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGTCTCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	35340262	35335175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339425_35339504_35340097
ENSMUSG00000024387.14_35335176_35340262_3	chr17	-	953	7	NNC	ENSMUSG00000024387.14	novel	961	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGTCTCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	35340262	35335175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337545_35338729_35338833_35339420_35339504_35340097
ENSMUSG00000024387.14_35335176_35340262_4	chr17	-	950	7	NNC	ENSMUSG00000024387.14	novel	961	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGTCTCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	35340262	35335175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340106
ENSMUSG00000024392.18_35354204_35363270_1	chr17	+	2462	16	ISM	ENSMUSG00000024392.18	ENST00000676571.1	3865	26	24	3019	23	-3011	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCACCTCAGTGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	35354203	35363270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361670_35361816_35361898_35361987_35362383_35362659_35363126
ENSMUSG00000024392.18_35354204_35363333_1	chr17	+	2525	16	ISM	ENSMUSG00000024392.18	ENST00000676571.1	3865	26	24	2956	23	-2948	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGCAGTGAGAGTATCGC	NA	NA	NA	NA	NA	NA	NA	NA	35354203	35363333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361670_35361816_35361898_35361987_35362383_35362659_35363126
ENSMUSG00000024392.18_35354322_35363377_1	chr17	+	2451	16	ISM	ENSMUSG00000024392.18	ENST00000676571.1	3865	26	142	2912	141	-2904	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGCAACATCTTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	35354321	35363377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361670_35361816_35361898_35361987_35362383_35362659_35363126
ENSMUSG00000024392.18_35355099_35363744_1	chr17	+	2551	16	ISM	ENSMUSG00000024392.18	ENST00000676571.1	3865	26	919	2545	10	-2537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGAGAGCCCAGATCG	NA	NA	NA	NA	NA	NA	NA	NA	35355098	35363744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361670_35361816_35361898_35361987_35362383_35362659_35363126_35363419_35363574
ENSMUSG00000024392.18_35357345_35359285_1	chr17	+	524	5	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	2256	7004	2256	-6996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGAACTCACAAACATCAG	NA	NA	NA	NA	NA	NA	NA	NA	35357344	35359285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208
ENSMUSG00000024392.18_35357412_35364161_1	chr17	+	2477	17	ISM	ENSMUSG00000024392.18	ENST00000676571.1	3865	26	3232	2128	2323	-2120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTCCAAGAGCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	35357411	35364161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361670_35361816_35361898_35361987_35362383_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112
ENSMUSG00000024392.18_35357649_35364379_1	chr17	+	2465	17	ISM	ENSMUSG00000024392.18	ENST00000676571.1	3865	26	3469	1910	2560	-1902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGGGGGACAGCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	35357648	35364379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361670_35361816_35361898_35361987_35362383_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304
ENSMUSG00000024392.18_35357719_35359846_1	chr17	+	475	5	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	2630	6443	2630	-6435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGCGCCGTCTTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	35357718	35359846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797
ENSMUSG00000024392.18_35357999_35364728_1	chr17	+	2552	17	ISM	ENSMUSG00000024392.18	ENST00000676571.1	3865	26	3819	1561	2910	-1553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1480	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGATCCAATAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	35357998	35364728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361670_35361816_35361898_35361987_35362383_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581
ENSMUSG00000024392.18_35359207_35365065_1	chr17	+	2549	17	ISM	ENSMUSG00000024392.18	ENST00000676571.1	3865	26	5027	1224	4118	-1216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCCTGAAGGAGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	35359206	35365065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361670_35361816_35361898_35361987_35362383_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001
ENSMUSG00000024392.18_35359397_35365329_1	chr17	+	2547	18	ISM	ENSMUSG00000024392.18	ENST00000676571.1	3865	26	5217	960	4308	-952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTCTCTTTGCTGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	35359396	35365329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361670_35361816_35361898_35361987_35362383_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221
ENSMUSG00000024392.18_35359865_35365784_1	chr17	+	2463	18	ISM	ENSMUSG00000024392.18	ENST00000676571.1	3865	26	5685	505	4776	-497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1402	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTAAGGCAGCCGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	35359864	35365784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361670_35361816_35361898_35361987_35362383_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732
ENSMUSG00000024392.18_35360465_35366136_1	chr17	+	2452	18	ISM	ENSMUSG00000024392.18	ENST00000676571.1	3865	26	6285	153	5376	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGACTGCAGGAAGATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	35360464	35366136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361670_35361816_35361898_35361987_35362383_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ENSMUSG00000024392.18_35360519_35366272_1	chr17	+	2534	18	ISM	ENSMUSG00000024392.18	ENST00000676571.1	3865	26	6339	17	5430	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCCTGGCTCCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	35360518	35366272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361670_35361816_35361898_35361987_35362383_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ENSMUSG00000024392.18_35360522_35361783_1	chr17	+	490	4	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	5433	4506	5433	-4498	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGGGACCTCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	35360521	35361783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35360600_35360805_35361059_35361282_35361361_35361702
ENSMUSG00000024392.18_35360533_35366277_1	chr17	+	2525	18	ISM	ENSMUSG00000024392.18	ENST00000676571.1	3865	26	6353	12	5444	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTCCTTTGCCTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	35360532	35366277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361670_35361816_35361898_35361987_35362383_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ENSMUSG00000024392.18_35360803_35361986_1	chr17	+	535	4	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	5714	4303	5714	-4295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCTGTTCTTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	35360802	35361986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35361059_35361282_35361361_35361702_35361816_35361898
ENSMUSG00000024392.18_35360953_35362422_1	chr17	+	424	5	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	5864	3867	5864	-3859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTAGTGCTGGTACTACC	NA	NA	NA	NA	NA	NA	NA	NA	35360952	35362422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362383
ENSMUSG00000024392.18_35360953_35362480_1	chr17	+	482	5	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	5864	3809	5864	-3801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGCCTCCACCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	35360952	35362480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362383
ENSMUSG00000024392.18_35360953_35362543_1	chr17	+	545	5	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	5864	3746	5864	-3738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGGGGCCTGCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	35360952	35362543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362383
ENSMUSG00000024395.10_32064399_32091298_1	chr18	+	1475	10	FSM	ENSMUSG00000024395.10	ENSMUST00000025254.9	1870	10	21	374	21	-374	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCGCAGATCCCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	32064398	32091298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_32064604_32074792_32074953_32077191_32077259_32077488_32077610_32087488_32087639_32088310_32088462_32089310_32089404_32090005_32090055_32090290_32090367_32090895
ENSMUSG00000024395.10_32064399_32091336_1	chr18	+	1513	10	FSM	ENSMUSG00000024395.10	ENSMUST00000025254.9	1870	10	21	336	21	-336	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCAGGAGAGTTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	32064398	32091336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_32064604_32074792_32074953_32077191_32077259_32077488_32077610_32087488_32087639_32088310_32088462_32089310_32089404_32090005_32090055_32090290_32090367_32090895
ENSMUSG00000024395.10_32064538_32091404_1	chr18	+	1442	10	FSM	ENSMUSG00000024395.10	ENSMUST00000025254.9	1870	10	160	268	160	-268	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCACCACGCAGATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	32064537	32091404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_32064604_32074792_32074953_32077191_32077259_32077488_32077610_32087488_32087639_32088310_32088462_32089310_32089404_32090005_32090055_32090290_32090367_32090895
ENSMUSG00000024395.10_32074791_32091571_1	chr18	+	1545	9	ISM	ENSMUSG00000024395.10	ENSMUST00000025254.9	1870	10	10413	101	10413	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCAAGTGTGGGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	32074790	32091571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32074953_32077191_32077259_32077488_32077610_32087488_32087639_32088310_32088462_32089310_32089404_32090005_32090055_32090290_32090367_32090895
ENSMUSG00000024395.10_32077190_32091672_1	chr18	+	1486	8	ISM	ENSMUSG00000024395.10	ENSMUST00000025254.9	1870	10	12812	0	12812	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGAGTGTCTGTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	32077189	32091672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32077259_32077488_32077610_32087488_32087639_32088310_32088462_32089310_32089404_32090005_32090055_32090290_32090367_32090895
ENSMUSG00000024399.6_35413499_35414930_1	chr17	+	484	3	FSM	ENSMUSG00000024399.6	ENST00000446745.2	684	3	8	192	8	-192	multi-exon	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGGGCGCGGAGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	35413498	35414930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35413660_35414269_35414342_35414679
ENSMUSG00000024399.6_35413499_35414930_2	chr17	+	479	3	NNC	ENSMUSG00000024399.6	novel	684	3	NA	NA	8	-192	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGGGCGCGGAGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	35413498	35414930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35413655_35414269_35414342_35414679
ENSMUSG00000024399.6_35413602_35415028_1	chr17	+	474	3	NNC	ENSMUSG00000024399.6	novel	684	3	NA	NA	0	-94	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGGCGAGAGGGTCTACG	NA	NA	NA	NA	NA	NA	NA	NA	35413601	35415028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35413655_35414269_35414342_35414679
ENSMUSG00000024399.6_35413602_35415028_2	chr17	+	479	3	FSM	ENSMUSG00000024399.6	ENST00000446745.2	684	3	111	94	0	-94	multi-exon	FALSE	canonical	NA	NA	NA	NA	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGGCGAGAGGGTCTACG	NA	NA	NA	NA	NA	NA	NA	NA	35413601	35415028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35413660_35414269_35414342_35414679
ENSMUSG00000024400.17_31937229_31968475_1	chr18	+	2411	6	NNC	ENSMUSG00000024400.17	novel	2416	6	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGCACTGTTAGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	31937228	31968475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_31937308_31960314_31960542_31962289_31962354_31962927_31963033_31966362_31966459_31966635
ENSMUSG00000024400.17_32014248_32021261_1	chr18	+	702	6	ISM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	77097	19189	77019	-19189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCCGTCTCAGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	32014247	32021261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122
ENSMUSG00000024400.17_32022081_32035424_1	chr18	+	706	4	ISM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	84930	5026	84852	-5026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGGACAACTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	32022080	32035424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32022194_32026042_32026152_32029653_32030090_32035376
ENSMUSG00000024400.17_32029710_32037372_1	chr18	+	724	4	ISM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	92559	3078	92481	-3078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTCTCTCCAAGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	32029709	32037372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32030090_32035376_32035541_32035634_32035731_32037288
ENSMUSG00000024400.17_32029797_32037437_1	chr18	+	702	4	ISM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	92646	3013	92568	-3013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGGCACGTCTGAACACAG	NA	NA	NA	NA	NA	NA	NA	NA	32029796	32037437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32030090_32035376_32035541_32035634_32035731_32037288
ENSMUSG00000024400.17_32035415_32040097_1	chr18	+	717	4	ISM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	98264	353	98186	-353	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGCTCACCACTGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	32035414	32040097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32035541_32035634_32035731_32037288_32037505_32039818
ENSMUSG00000024402.6_35422141_35424145_1	chr17	-	1340	4	FSM	ENSMUSG00000024402.6	ENST00000418386.3	1340	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGTCTGCTTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	35424145	35422140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_35423126_35423350_35423451_35423533_35423639_35423995
ENSMUSG00000024403.17_35455538_35456880_1	chr17	+	520	3	NNC	ENSMUSG00000024403.17	novel	1528	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAATCCATAATATCATC	NA	NA	NA	NA	NA	NA	NA	NA	35455537	35456880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35455682_35456097_35456194_35456600
ENSMUSG00000024403.17_35455538_35456880_2	chr17	+	510	3	NNC	ENSMUSG00000024403.17	novel	1528	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAATCCATAATATCATC	NA	NA	NA	NA	NA	NA	NA	NA	35455537	35456880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35455668_35456093_35456194_35456600
ENSMUSG00000024403.17_35455538_35456880_3	chr17	+	511	3	NNC	ENSMUSG00000024403.17	novel	1528	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAATCCATAATATCATC	NA	NA	NA	NA	NA	NA	NA	NA	35455537	35456880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35455668_35456092_35456194_35456600
ENSMUSG00000024403.17_35455538_35456880_4	chr17	+	525	3	NNC	ENSMUSG00000024403.17	novel	1528	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAATCCATAATATCATC	NA	NA	NA	NA	NA	NA	NA	NA	35455537	35456880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35455682_35456092_35456194_35456600
ENSMUSG00000024404.8_12261837_12287077_1	chr18	+	1583	12	ISM	ENSMUSG00000024404.8	ENSMUST00000025270.8	3790	13	39	3367	-2	-1496	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTGCACAGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	12261836	12287077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969
ENSMUSG00000024404.8_12268907_12288315_1	chr18	+	1430	12	ISM	ENSMUSG00000024404.8	ENSMUST00000025270.8	3790	13	7109	2129	7068	-258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACGGGAGGAAAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	12268906	12288315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ENSMUSG00000024404.8_12268966_12270340_1	chr18	+	309	4	ISM	ENSMUSG00000024404.8	ENST00000581585.5	1874	13	7154	18250	7127	-18233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACATCACCACCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	12268965	12270340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12269025_12269797_12269896_12269984_12270093_12270296
ENSMUSG00000024404.8_12269753_12288476_1	chr18	+	1470	11	ISM	ENSMUSG00000024404.8	ENST00000581585.5	1874	13	7941	114	7914	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTGACCCACGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	12269752	12288476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ENSMUSG00000024404.8_12270295_12288681_1	chr18	+	1426	9	ISM	ENSMUSG00000024404.8	ENST00000581585.5	1874	13	8483	-91	8456	91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGGGACTGAGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	12270294	12288681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ENSMUSG00000024404.8_12270335_12288753_1	chr18	+	1458	9	ISM	ENSMUSG00000024404.8	ENST00000581585.5	1874	13	8523	-163	8496	163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTGCGTCTTTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	12270334	12288753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ENSMUSG00000024404.8_12270391_12288813_1	chr18	+	1462	9	ISM	ENSMUSG00000024404.8	ENST00000581585.5	1874	13	8579	-223	8552	223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGAGCGTGGAGACCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	12270390	12288813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ENSMUSG00000024404.8_12276028_12289012_1	chr18	+	1466	7	ISM	ENSMUSG00000024404.8	ENST00000581585.5	1874	13	14216	-422	14189	422	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTCTTCATTAGGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	12276027	12289012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ENSMUSG00000024404.8_12276082_12289064_1	chr18	+	1464	7	ISM	ENSMUSG00000024404.8	ENST00000581585.5	1874	13	14270	-474	14243	474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTATCTGGAAGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	12276081	12289064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ENSMUSG00000024404.8_12281873_12288476_1	chr18	+	803	6	ISM	ENSMUSG00000024404.8	ENST00000577501.5	1869	13	20034	97	20034	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTGACCCACGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	12281872	12288476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286978_12287078_12288276
ENSMUSG00000024404.8_12281873_12289205_1	chr18	+	1541	6	ISM	ENSMUSG00000024404.8	ENST00000581585.5	1874	13	20061	-615	20034	615	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGTTCAGTAAGTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	12281872	12289205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ENSMUSG00000024404.8_12282635_12289354_1	chr18	+	1458	5	ISM	ENSMUSG00000024404.8	ENST00000581585.5	1874	13	20823	-764	20796	764	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTCATTACCCCAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	12282634	12289354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ENSMUSG00000024404.8_12282686_12289407_1	chr18	+	1460	5	ISM	ENSMUSG00000024404.8	ENST00000581585.5	1874	13	20874	-817	20847	817	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTCTGGTTATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	12282685	12289407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ENSMUSG00000024410.16_12301809_12322138_1	chr18	+	1571	16	NNC	ENSMUSG00000024410.16	novel	1923	18	NA	NA	35	-884	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	861	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGCCCTGCCACGGCT	NA	NA	NA	NA	NA	NA	NA	NA	12301808	12322138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_12301960_12302289_12302367_12304605_12304691_12312169_12312311_12312545_12312650_12313541_12313632_12313724_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069
ENSMUSG00000024410.16_12301809_12322256_1	chr18	+	1613	17	ISM	ENSMUSG00000024410.16	ENST00000590868.5	1923	18	-36	766	35	-766	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTAAACACCAGGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	12301808	12322256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12301960_12302289_12302367_12304605_12304691_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216
ENSMUSG00000024410.16_12301945_12322351_1	chr18	+	1572	17	ISM	ENSMUSG00000024410.16	ENST00000590868.5	1923	18	100	671	100	-671	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACCGACGATGTCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	12301944	12322351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12301960_12302289_12302367_12304605_12304691_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216
ENSMUSG00000024410.16_12302306_12322332_1	chr18	+	1520	16	NNC	ENSMUSG00000024410.16	novel	1923	18	NA	NA	461	-690	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	947	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAGATGCTGCGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	12302305	12322332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_12302367_12304605_12304691_12312169_12312311_12312545_12312650_12313541_12313632_12313724_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216
ENSMUSG00000024410.16_12302325_12314679_1	chr18	+	751	9	ISM	ENSMUSG00000024410.16	ENSMUST00000025276.15	2170	20	551	8375	480	502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCACGGTTACCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	12302324	12314679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640
ENSMUSG00000024410.16_12304604_12322443_1	chr18	+	1574	15	ISM	ENSMUSG00000024410.16	ENST00000590868.5	1923	18	2759	579	2759	-579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1653	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGAATGCCCAGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	12304603	12322443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12304691_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216
ENSMUSG00000024410.16_12304604_12322443_2	chr18	+	1571	15	NNC	ENSMUSG00000024410.16	novel	1923	18	NA	NA	2759	-579	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1265	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGAATGCCCAGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	12304603	12322443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_12304691_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321619_12321695_12321876_12321982_12322069_12322139_12322216
ENSMUSG00000024410.16_12309205_12317088_1	chr18	+	739	8	ISM	ENSMUSG00000024410.16	ENSMUST00000025276.15	2170	20	7431	5966	7360	2911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAAGGTGGTGGCACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	12309204	12317088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035
ENSMUSG00000024410.16_12312169_12322988_1	chr18	+	1613	15	ISM	ENSMUSG00000024410.16	ENST00000590868.5	1923	18	10324	34	10324	-34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2014	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATTTATTGCATTAATA	NA	NA	NA	NA	NA	NA	NA	NA	12312168	12322988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ENSMUSG00000024410.16_12313722_12322443_1	chr18	+	1029	11	ISM	ENSMUSG00000024410.16	ENST00000615148.4	1828	18	11877	608	11877	-579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGAATGCCCAGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	12313721	12322443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322340
ENSMUSG00000024410.16_12314639_12322988_1	chr18	+	1049	11	ISM	ENSMUSG00000024410.16	ENST00000615148.4	1828	18	12794	63	12794	-34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATTTATTGCATTAATA	NA	NA	NA	NA	NA	NA	NA	NA	12314638	12322988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322340_12322443_12322862
ENSMUSG00000024411.12_15526501_15533059_1	chr18	-	859	3	NNC	ENSMUSG00000024411.12	novel	1288	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCACTGAAGGCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	15533059	15526500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_15526787_15531154_15531313_15532644
ENSMUSG00000024411.12_15526501_15533059_2	chr18	-	866	3	FSM	ENSMUSG00000024411.12	ENST00000675739.1	860	3	1	-7	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCACTGAAGGCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	15533059	15526500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_15526787_15531147_15531313_15532644
ENSMUSG00000024414.14_94544593_94550744_1	chr11	+	585	4	FSM	ENSMUSG00000024414.14	ENSMUST00000025278.8	756	4	0	171	0	-171	multi-exon	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAGATGGCTCAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	94544592	94550744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_94544668_94547312_94547445_94547808_94547877_94550434
ENSMUSG00000024420.10_13821768_13976955_1	chr18	-	761	5	NNC	ENSMUSG00000024420.10	novel	4324	7	NA	NA	127822	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAAAGTGAACAAAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	13976955	13821767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_13822082_13848197_13848314_13850672_13850805_13950294_13950377_13976838
ENSMUSG00000024420.10_13848198_13977289_1	chr18	-	781	4	NNC	ENSMUSG00000024420.10	novel	5032	7	NA	NA	127488	-26269	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGCCTGGTGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	13977289	13848197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_13848314_13850672_13850805_13950294_13950377_13976838
ENSMUSG00000024420.10_13850715_13977411_1	chr18	-	745	3	NNC	ENSMUSG00000024420.10	novel	5032	7	NA	NA	127366	-28786	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGATGGGTGGTACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	13977411	13850714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_13850805_13950294_13950377_13976838
ENSMUSG00000024420.10_13950316_13977536_1	chr18	-	762	2	ISM	ENSMUSG00000024420.10	ENSMUST00000234410.2	5032	7	127241	129043	127241	-128387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGCAAATCACATGATT	NA	NA	NA	NA	NA	NA	NA	NA	13977536	13950315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_13950380_13976838
ENSMUSG00000024420.10_13979695_14105637_1	chr18	-	757	3	ISM	ENSMUSG00000024420.10	ENST00000584787.5	4324	7	64	157927	64	-157766	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGATGAAGGACACTCA	NA	NA	NA	NA	NA	NA	NA	NA	14105637	13979694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_13980192_14072018_14072199_14105557
ENSMUSG00000024421.17_12637367_12643572_1	chr18	+	266	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	76	67631	76	-67631	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACGGATCTTGTAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	12637366	12643572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12637453_12639977_12640092_12643506
ENSMUSG00000024421.17_12637432_12643616_1	chr18	+	245	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	141	67587	141	-67587	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGTTGAGGCTCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	12637431	12643616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12637453_12639977_12640092_12643506
ENSMUSG00000024421.17_12640041_12649582_1	chr18	+	286	4	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	2750	61621	2750	-61621	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCAGCCATGCAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	12640040	12649582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12640092_12643506_12643617_12646700_12646782_12649538
ENSMUSG00000024421.17_12646717_12652959_1	chr18	+	267	4	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	9426	58244	9426	-58244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGAGGAACTCCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	12646716	12652959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12646782_12649538_12649646_12651793_12651845_12652915
ENSMUSG00000024421.17_12649598_12657578_1	chr18	+	267	4	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	12307	53625	12307	-53625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTCTGCCACCTCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	12649597	12657578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12649646_12651793_12651845_12652915_12653068_12657562
ENSMUSG00000024421.17_12652977_12657832_1	chr18	+	252	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	15686	53371	15686	-53371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAATCCAAAGTGCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	12652976	12657832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12653068_12657562_12657674_12657782
ENSMUSG00000024421.17_12653020_12657894_1	chr18	+	271	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	15729	53309	15729	-53309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAAAGTTACCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	12653019	12657894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12653068_12657562_12657674_12657782
ENSMUSG00000024421.17_12657610_12658935_1	chr18	+	271	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	20319	52268	20319	-52268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCAGGACCTACGTTC	NA	NA	NA	NA	NA	NA	NA	NA	12657609	12658935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12657674_12657782_12657895_12658840
ENSMUSG00000024421.17_12658914_12661380_1	chr18	+	270	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	21623	49823	21623	-49823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGCAAGACAGGAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	12658913	12661380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12659038_12660605_12660723_12661351
ENSMUSG00000024421.17_12658972_12661440_1	chr18	+	272	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	21681	49763	21681	-49763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCTGGTGGTGGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	12658971	12661440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12659038_12660605_12660723_12661351
ENSMUSG00000024421.17_12660647_12661808_1	chr18	+	270	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	23356	49395	23356	-49395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGGATGCTGCCACGG	NA	NA	NA	NA	NA	NA	NA	NA	12660646	12661808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12660723_12661351_12661507_12661769
ENSMUSG00000024421.17_12662593_12665172_1	chr18	+	269	3	ISM	ENSMUSG00000024421.17	ENSMUST00000188815.2	5551	38	25337	50898	25302	-46031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCCCATCCAGACAGATT	NA	NA	NA	NA	NA	NA	NA	NA	12662592	12665172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12662666_12664891_12665006_12665090
ENSMUSG00000024421.17_12664964_12667065_1	chr18	+	270	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	27673	44138	27673	-44138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCAACCAACAGTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	12664963	12667065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12665006_12665090_12665271_12667017
ENSMUSG00000024421.17_12665220_12670804_1	chr18	+	255	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	27929	40399	27929	-40399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAGATTTAAAAGGATAC	NA	NA	NA	NA	NA	NA	NA	NA	12665219	12670804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12665271_12667017_12667161_12670743
ENSMUSG00000024421.17_12667095_12672761_1	chr18	+	273	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	29804	38442	29804	-38442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGCTGACATGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	12667094	12672761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12667161_12670743_12670915_12672725
ENSMUSG00000024421.17_12673098_12675415_1	chr18	+	269	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	35807	35788	35807	-35788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCCTACCCAGCCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	12673097	12675415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12673182_12673591_12673726_12675364
ENSMUSG00000024421.17_12673146_12675469_1	chr18	+	275	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	35855	35734	35855	-35734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGGACAGAGGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	12673145	12675469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12673182_12673591_12673726_12675364
ENSMUSG00000024421.17_12675436_12682320_1	chr18	+	266	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	38145	28883	38145	-28883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAATATTTGATTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	12675435	12682320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12675510_12680398_12680519_12682248
ENSMUSG00000024421.17_12686237_12690743_1	chr18	+	282	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	48946	20460	48946	-20460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACCAGGTTCTGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	12686236	12690743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12686363_12689683_12689824_12690727
ENSMUSG00000024421.17_12686304_12690794_1	chr18	+	266	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	49013	20409	49013	-20409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTCGCTCAGCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	12686303	12690794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12686363_12689683_12689824_12690727
ENSMUSG00000024421.17_12689756_12694824_1	chr18	+	271	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	52465	16379	52465	-16379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTTTAAACAAGCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	12689755	12694824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12689824_12690727_12690860_12694753
ENSMUSG00000024421.17_12690815_12700791_1	chr18	+	268	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	53524	10412	53524	-10412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGAACACCAAGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	12690814	12700791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12690860_12694753_12694908_12700722
ENSMUSG00000024421.17_12700746_12705070_1	chr18	+	258	2	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	63455	6133	63455	-6133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGGGCAGGAGGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	12700745	12705070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12700890_12704956
ENSMUSG00000024421.17_12705078_12710873_1	chr18	+	269	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	67787	330	67787	-330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCCTCTGCGAGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	12705077	12710873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12705141_12707270_12707412_12710808
ENSMUSG00000024421.17_12707342_12711128_1	chr18	+	288	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	70051	75	70051	-75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACCGGGGTCTTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	12707341	12711128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12707412_12710808_12710969_12711070
ENSMUSG00000024421.17_12707393_12711181_1	chr18	+	290	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	70102	22	70102	-22	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACATGGAGGCAGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	12707392	12711181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12707412_12710808_12710969_12711070
ENSMUSG00000024422.15_36190717_36194182_1	chr17	+	1379	7	ISM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	6	9380	6	-9380	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCACACAGATCCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	36190716	36194182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024
ENSMUSG00000024422.15_36190902_36194805_1	chr17	+	1327	8	ISM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	191	8757	191	-8757	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGAACGAGGTGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	36190901	36194805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706
ENSMUSG00000024422.15_36192325_36196476_1	chr17	+	1281	9	ISM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	1614	7086	1614	-7086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGGTCCTGGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	36192324	36196476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386
ENSMUSG00000024422.15_36192649_36196874_1	chr17	+	1284	9	ISM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	1938	6688	1938	-6688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGCTGTGGTGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	36192648	36196874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775
ENSMUSG00000024422.15_36193435_36198332_1	chr17	+	1282	9	ISM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	2724	5230	2724	-5230	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCATCATCTATGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	36193434	36198332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290
ENSMUSG00000024422.15_36193790_36198846_1	chr17	+	1294	9	ISM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	3079	4716	3079	-4716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACAAGCCTGGGCAACGT	NA	NA	NA	NA	NA	NA	NA	NA	36193789	36198846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726
ENSMUSG00000024422.15_36194023_36199094_1	chr17	+	1307	9	ISM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	3312	4468	3312	-4468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCCAGCGGCAGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	36194022	36199094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975
ENSMUSG00000024422.15_36194710_36200239_1	chr17	+	1328	10	ISM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	3999	3323	3999	-3323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACACACAGGTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	36194709	36200239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089
ENSMUSG00000024422.15_36194950_36200432_1	chr17	+	1297	10	ISM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	4239	3130	4239	-3130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGCGTGTGGAAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	36194949	36200432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330
ENSMUSG00000024422.15_36196428_36201879_1	chr17	+	1311	10	ISM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	5717	1683	5717	-1683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGTGTTTATTCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	36196427	36201879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806
ENSMUSG00000024422.15_36196496_36201923_1	chr17	+	1287	10	ISM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	5785	1639	5785	-1639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGCTGGTTGCTCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	36196495	36201923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806
ENSMUSG00000024422.15_36197038_36203517_1	chr17	+	1294	9	ISM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	6327	45	6327	-45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTGCATGGGAACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	36197037	36203517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ENSMUSG00000024423.7_13105126_13123659_1	chr18	+	1269	11	FSM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	146	2348	146	738	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTCCCAGTGGTCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	13105125	13123659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ENSMUSG00000024423.7_13105329_13123867_1	chr18	+	1274	11	FSM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	349	2140	349	946	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGCACAGTGTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	13105328	13123867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ENSMUSG00000024423.7_13107731_13122921_1	chr18	+	975	10	FSM	ENSMUSG00000024423.7	ENST00000519677.1	934	10	-41	0	-41	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACGAACACTCCTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	13107730	13122921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_13107899_13109035_13109089_13109525_13109589_13110628_13110725_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801
ENSMUSG00000024423.7_13107731_13124014_1	chr18	+	1359	10	ISM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	2751	1993	-41	1093	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGCTCCCAGTTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	13107730	13124014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ENSMUSG00000024423.7_13117294_13124265_1	chr18	+	1242	6	ISM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	12314	1742	9522	1344	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGTTGTTGCCTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	13117293	13124265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ENSMUSG00000024423.7_13117369_13124399_1	chr18	+	1301	6	ISM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	12389	1608	9597	1478	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGAAGCACTTCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	13117368	13124399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ENSMUSG00000024423.7_13121359_13124600_1	chr18	+	1270	3	ISM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	16379	1407	13587	-1407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAATCTTTTGATTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	13121358	13124600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_13121443_13122801_13122937_13123549
ENSMUSG00000024423.7_13122839_13124721_1	chr18	+	1270	2	ISM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	17859	1286	15067	-1286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAAAATTCCCTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	13122838	13124721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_13122937_13123549
ENSMUSG00000024423.7_13122894_13124784_1	chr18	+	1278	2	ISM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	17914	1223	15122	-1223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAAATTGATCAACGGAT	NA	NA	NA	NA	NA	NA	NA	NA	13122893	13124784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_13122937_13123549
ENSMUSG00000024425.5_38552037_38597892_1	chr18	+	1355	8	NNC	ENSMUSG00000024425.5	novel	1796	8	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGTTCTCAATTAGT	NA	NA	NA	NA	NA	NA	NA	NA	38552036	38597892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_38552230_38575975_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
ENSMUSG00000024425.5_38552037_38597931_1	chr18	+	1400	8	FSM	ENSMUSG00000024425.5	ENSMUST00000236085.2	1796	8	77	319	15	39	multi-exon	FALSE	canonical	NA	NA	NA	NA	2050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTCTACATTCAGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	38552036	38597931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
ENSMUSG00000024425.5_38552037_38597946_1	chr18	+	1409	8	NNC	ENSMUSG00000024425.5	novel	1796	8	NA	NA	15	54	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTACCTTTTCATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	38552036	38597946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585477_38589107_38589175_38593597_38593704_38597329
ENSMUSG00000024425.5_38575967_38598250_1	chr18	+	1529	7	ISM	ENSMUSG00000024425.5	ENSMUST00000236085.2	1796	8	24007	0	23945	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGTGTTTCATTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	38575966	38598250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
ENSMUSG00000024426.18_36208487_36220383_1	chr17	-	1305	12	ISM	ENSMUSG00000024426.18	ENSMUST00000061052.12	1452	13	584	0	554	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTTGTCATTATTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	36220383	36208486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322
ENSMUSG00000024426.18_36208632_36220901_1	chr17	-	1241	13	FSM	ENSMUSG00000024426.18	ENSMUST00000061052.12	1452	13	66	145	36	-128	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCCAAAGCTTAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	36220901	36208631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ENSMUSG00000024426.18_36210744_36212325_1	chr17	-	1087	2	ISM	ENSMUSG00000024426.18	ENSMUST00000056034.13	1930	10	8612	0	8612	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGACATTTTCAGCGAA	NA	NA	NA	NA	NA	NA	NA	NA	36212325	36210743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36211765_36212259
ENSMUSG00000024426.18_36210744_36212411_1	chr17	-	1173	2	ISM	ENSMUSG00000024426.18	ENSMUST00000056034.13	1930	10	8526	0	8526	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGACATTTTCAGCGAA	NA	NA	NA	NA	NA	NA	NA	NA	36212411	36210743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36211765_36212259
ENSMUSG00000024426.18_36211189_36219515_1	chr17	-	1068	6	ISM	ENSMUSG00000024426.18	ENSMUST00000141662.8	2034	11	1422	480	1422	-445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAATGTTGCTCTGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	36219515	36211188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36211765_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454
ENSMUSG00000024426.18_36211630_36220923_1	chr17	-	1099	11	FSM	ENSMUSG00000024426.18	ENSMUST00000141662.8	2034	11	14	921	14	-886	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTAACTAGCCTAACACT	NA	NA	NA	NA	NA	NA	NA	NA	36220923	36211629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_36211765_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ENSMUSG00000024429.10_36290928_36291575_1	chr17	+	279	2	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	185	8779	185	-8779	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGACACGTCGGATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	36290927	36291575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36291140_36291508
ENSMUSG00000024429.10_36290980_36291648_1	chr17	+	300	2	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	237	8706	237	-8706	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCCAGAGGCTACGACCC	NA	NA	NA	NA	NA	NA	NA	NA	36290979	36291648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36291140_36291508
ENSMUSG00000024429.10_36291547_36292218_1	chr17	+	285	3	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	804	8136	804	-8136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTTGGAGTTATGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	36291546	36292218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36291675_36291953_36292091_36292198
ENSMUSG00000024429.10_36292013_36292476_1	chr17	+	257	3	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	1270	7878	1270	-7878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGTCTGACATCGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	36292012	36292476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36292091_36292198_36292351_36292449
ENSMUSG00000024429.10_36292196_36293445_1	chr17	+	256	3	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	1453	6909	1453	-6909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTAACTGGAGAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	36292195	36293445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36292351_36292449_36292522_36293416
ENSMUSG00000024429.10_36292244_36293501_1	chr17	+	264	3	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	1501	6853	1501	-6853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCCCGCCGGCTCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	36292243	36293501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36292351_36292449_36292522_36293416
ENSMUSG00000024429.10_36292315_36293571_1	chr17	+	263	3	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	1572	6783	1572	-6783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTCACCTCTTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	36292314	36293571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36292351_36292449_36292522_36293416
ENSMUSG00000024429.10_36293522_36294377_1	chr17	+	290	3	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	2779	5977	2779	-5977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGCCAGCAGTACTGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	36293521	36294377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36293625_36293838_36293935_36294286
ENSMUSG00000024429.10_36293587_36294436_1	chr17	+	284	3	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	2844	5918	2844	-5918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGGAGCGCTACAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	36293586	36294436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36293625_36293838_36293935_36294286
ENSMUSG00000024429.10_36293886_36298376_1	chr17	+	264	3	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	3143	1978	3143	-1978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTCTGATCAACGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	36293885	36298376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36293935_36294286_36294482_36298356
ENSMUSG00000024429.10_36294420_36298642_1	chr17	+	267	3	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	3677	1712	3677	-1712	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGATCCAGGAGCCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	36294419	36298642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36294482_36298356_36298536_36298616
ENSMUSG00000024429.10_36298450_36299048_1	chr17	+	293	3	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	7707	1306	7707	-1306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACGTGTACAGAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	36298449	36299048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36298536_36298616_36298780_36299004
ENSMUSG00000024429.10_36298706_36299474_1	chr17	+	277	3	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	7963	880	7963	-880	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTGATGAGGAGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	36298705	36299474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36298780_36299004_36299146_36299412
ENSMUSG00000024429.10_36299118_36299639_1	chr17	+	255	2	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	8375	715	8375	-715	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGAGTGCTGAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	36299117	36299639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36299146_36299412
ENSMUSG00000024430.15_12874412_12884180_1	chr18	+	511	2	ISM	ENSMUSG00000024430.15	ENST00000627314.1	1410	3	7	2924	0	-2924	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTGCTCTGGAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	12874411	12884180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12874459_12883716
ENSMUSG00000024430.15_12874412_12887017_1	chr18	+	492	3	ISM	ENSMUSG00000024430.15	ENST00000327201.10	1083	4	7	1180	0	-87	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCACCTGGGCCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	12874411	12887017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12874459_12883716_12884062_12886917
ENSMUSG00000024430.15_12883715_12887104_1	chr18	+	534	2	ISM	ENSMUSG00000024430.15	ENSMUST00000121018.8	1305	6	9309	1093	9303	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCAACTTATGTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	12883714	12887104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12884062_12886917
ENSMUSG00000024430.15_12884521_12887104_2	chr18	+	552	2	ISM	ENSMUSG00000024430.15	ENST00000627314.1	1410	3	10116	0	10109	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCAACTTATGTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	12884520	12887104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12884886_12886917
ENSMUSG00000024430.15_12887069_12888197_1	chr18	+	533	2	ISM	ENSMUSG00000024430.15	ENST00000327201.10	1083	4	12664	0	12657	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAACTGCATTGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	12887068	12888197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12887525_12888120
ENSMUSG00000024430.15_12887135_12888198_1	chr18	+	468	2	ISM	ENSMUSG00000024430.15	ENST00000327201.10	1083	4	12730	-1	12723	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTGCATTGCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	12887134	12888198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_12887525_12888120
ENSMUSG00000024431.16_39545181_39622899_1	chr18	-	4848	9	FSM	ENSMUSG00000024431.16	ENSMUST00000025300.13	4989	9	0	141	0	-141	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTGTTAAGTTTCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	39622899	39545180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622797
ENSMUSG00000024442.7_38385936_38390396_1	chr18	+	517	5	ISM	ENSMUSG00000024442.7	ENST00000432126.7	1097	8	63	5550	63	1791	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAATGTGGGCTTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	38385935	38390396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310
ENSMUSG00000024442.7_38386960_38391107_1	chr18	+	519	5	ISM	ENSMUSG00000024442.7	ENST00000432126.7	1097	8	1087	4839	1087	2502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGGGCCACAGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	38386959	38391107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080
ENSMUSG00000024442.7_38387043_38391162_1	chr18	+	491	5	ISM	ENSMUSG00000024442.7	ENST00000432126.7	1097	8	1170	4784	1170	2557	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTCTTTGTCAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	38387042	38391162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080
ENSMUSG00000024442.7_38387095_38391219_1	chr18	+	496	5	ISM	ENSMUSG00000024442.7	ENST00000432126.7	1097	8	1222	4727	1222	2614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTCTGGCTTGACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	38387094	38391219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080
ENSMUSG00000024442.7_38387331_38395682_1	chr18	+	521	5	NIC	ENSMUSG00000024442.7	novel	1097	8	NA	NA	1458	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTTGCCCTTGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	38387330	38395682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr18_+_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38395651
ENSMUSG00000024442.7_38387561_38395801_1	chr18	+	511	4	NIC	ENSMUSG00000024442.7	novel	1097	8	NA	NA	1688	119	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAGAGAGAGACTTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	38387560	38395801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr18_+_38387620_38390310_38390454_38391080_38391240_38395651
ENSMUSG00000024442.7_38390366_38395906_1	chr18	+	506	3	NNC	ENSMUSG00000024442.7	novel	1097	8	NA	NA	4493	-40	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATAGCTGAAATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	38390365	38395906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_38390454_38391080_38391244_38395651
ENSMUSG00000024442.7_38390439_38395948_1	chr18	+	475	3	NNC	ENSMUSG00000024442.7	novel	1097	8	NA	NA	4566	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGGCCAGCCCACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	38390438	38395948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_38390454_38391080_38391244_38395651
ENSMUSG00000024442.7_38393030_38394981_1	chr18	+	351	3	ISM	ENSMUSG00000024442.7	ENSMUST00000025314.7	2394	13	9718	701	7157	-701	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTCCCAAAGAAGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	38393029	38394981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_38393110_38394116_38394339_38394932
ENSMUSG00000024442.7_38394205_38395146_1	chr18	+	348	2	ISM	ENSMUSG00000024442.7	ENSMUST00000025314.7	2394	13	10893	536	8332	-536	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTGCCTTAAAGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	38394204	38395146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_38394339_38394932
ENSMUSG00000024446.14_36568497_36568961_1	chr17	-	389	2	ISM	ENSMUSG00000024446.14	ENSMUST00000025319.7	729	5	0	1938	0	-1938	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCACAGGGTGGCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	36568961	36568496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36568599_36568674
ENSMUSG00000024454.17_38070025_38076756_1	chr18	-	1190	7	ISM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	11313	0	11313	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTAGTTAGGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	38076756	38070024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730
ENSMUSG00000024454.17_38070186_38077200_1	chr18	-	1096	8	ISM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	10869	161	10869	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTATGTCCATTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	38077200	38070185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181
ENSMUSG00000024454.17_38070252_38077246_1	chr18	-	1076	8	ISM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	10823	227	10823	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTGAAACCTTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	38077246	38070251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181
ENSMUSG00000024454.17_38070463_38078620_1	chr18	-	1128	11	ISM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	9449	438	9449	-438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGACAGGTCTCTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	38078620	38070462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563
ENSMUSG00000024454.17_38070616_38085590_1	chr18	-	1124	13	ISM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	2479	591	2479	-591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAAGTATGGTTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	38085590	38070615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523
ENSMUSG00000024454.17_38074005_38087817_1	chr18	-	1163	13	ISM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	252	3980	252	-3980	internal_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGCAGGGGCTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	38087817	38074004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734
ENSMUSG00000024454.17_38074149_38087971_1	chr18	-	1079	14	ISM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	98	4124	98	-4124	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCCAGACAATCTTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	38087971	38074148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ENSMUSG00000024471.13_44469835_44488455_1	chr18	+	1459	10	FSM	ENSMUSG00000024471.13	ENST00000515645.1	1459	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTTAACTAACTCACATTT	NA	NA	NA	NA	NA	NA	NA	NA	44469834	44488455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_44469917_44470246_44470378_44474369_44474545_44475408_44475511_44477508_44477556_44478078_44478212_44479074_44479283_44487182_44487349_44487868_44488003_44488174
ENSMUSG00000024471.13_44469860_44479151_1	chr18	+	591	6	ISM	ENSMUSG00000024471.13	ENST00000421631.6	1369	9	25	9345	25	-9304	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGTGTCTGAGAAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	44469859	44479151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_44469917_44474369_44474545_44475408_44475511_44477508_44477556_44478078_44478212_44479074
ENSMUSG00000024472.10_44513594_44551031_1	chr18	+	1331	9	FSM	ENSMUSG00000024472.10	ENST00000513585.6	1272	9	-59	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTTTTTTTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	44513593	44551031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_44513754_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
ENSMUSG00000024472.10_44513594_44551031_3	chr18	+	1329	9	NNC	ENSMUSG00000024472.10	novel	1272	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTTTTTTTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	44513593	44551031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_44513754_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548491_44550629
ENSMUSG00000024472.10_44513701_44533458_1	chr18	+	408	4	ISM	ENSMUSG00000024472.10	ENST00000389063.3	4261	12	48	20325	48	4306	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATGACTGTGCGGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	44513700	44533458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383
ENSMUSG00000024472.10_44528987_44538360_1	chr18	+	416	4	ISM	ENSMUSG00000024472.10	ENST00000389063.3	4261	12	15334	15423	15334	9208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTGTACATCATTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	44528986	44538360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_44529092_44532690_44532819_44533383_44533483_44538276
ENSMUSG00000024472.10_44529040_44538411_1	chr18	+	414	4	ISM	ENSMUSG00000024472.10	ENST00000389063.3	4261	12	15387	15372	15387	9259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGAAGAGAAATTAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	44529039	44538411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_44529092_44532690_44532819_44533383_44533483_44538276
ENSMUSG00000024472.10_44532733_44538595_1	chr18	+	410	4	ISM	ENSMUSG00000024472.10	ENST00000389063.3	4261	12	19080	15188	19080	9443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCACCTAATAAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44532732	44538595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_44532819_44533383_44533483_44538276_44538430_44538523
ENSMUSG00000024472.10_44552235_44552686_1	chr18	+	409	2	ISM	ENSMUSG00000024472.10	ENST00000389063.3	4261	12	38582	1097	38582	-1097	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCCTTAAAGTGGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	44552234	44552686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_44552540_44552582
ENSMUSG00000024472.10_44552308_44552772_1	chr18	+	422	2	ISM	ENSMUSG00000024472.10	ENST00000389063.3	4261	12	38655	1011	38655	-1011	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTGCATTTACAATAACT	NA	NA	NA	NA	NA	NA	NA	NA	44552307	44552772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_44552540_44552582
ENSMUSG00000024472.10_44552364_44552827_1	chr18	+	421	2	ISM	ENSMUSG00000024472.10	ENST00000389063.3	4261	12	38711	956	38711	-956	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGTAAGGTTTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	44552363	44552827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_44552540_44552582
ENSMUSG00000024474.8_36877709_36886507_1	chr18	+	1095	12	ISM	ENSMUSG00000024474.8	ENSMUST00000007042.6	1996	20	0	4185	0	-3865	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCTACAACCAAGACACC	NA	NA	NA	NA	NA	NA	NA	NA	36877708	36886507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479
ENSMUSG00000024474.8_36878664_36888808_1	chr18	+	1403	14	ISM	ENSMUSG00000024474.8	ENST00000434096.1	1636	17	0	1564	0	-1564	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGTTAAAAGAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	36878663	36888808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886733_36887605_36887692_36888487_36888559_36888749
ENSMUSG00000024474.8_36880401_36887684_1	chr18	+	1191	12	ISM	ENSMUSG00000024474.8	ENSMUST00000007042.6	1996	20	2692	3008	1737	-2688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTGTATTTACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	36880400	36887684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605
ENSMUSG00000024474.8_36880401_36889690_1	chr18	+	1425	14	ISM	ENSMUSG00000024474.8	ENST00000434096.1	1636	17	1737	682	1737	-682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTACACATGGGCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	36880400	36889690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886733_36887605_36887692_36888487_36888559_36888749_36888808_36889600
ENSMUSG00000024474.8_36881217_36888559_1	chr18	+	1174	11	NNC	ENSMUSG00000024474.8	novel	1636	17	NA	NA	2553	-1813	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAGACCCTAGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	36881216	36888559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886713_36887605_36887692_36888478
ENSMUSG00000024474.8_36881217_36889983_1	chr18	+	1440	14	ISM	ENSMUSG00000024474.8	ENST00000434096.1	1636	17	2553	389	2553	-389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTAGACTCTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	36881216	36889983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886733_36887605_36887692_36888487_36888559_36888749_36888808_36889600_36889690_36889874
ENSMUSG00000024474.8_36881541_36888559_1	chr18	+	1191	10	NNC	ENSMUSG00000024474.8	novel	1636	17	NA	NA	2877	-1813	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAGACCCTAGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	36881540	36888559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36887584_36887692_36888478
ENSMUSG00000024474.8_36881541_36890372_1	chr18	+	1479	14	ISM	ENSMUSG00000024474.8	ENST00000434096.1	1636	17	2877	0	2877	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCGGCATCCCTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	36881540	36890372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886733_36887605_36887692_36888487_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336
ENSMUSG00000024474.8_36881743_36889644_1	chr18	+	1076	12	NNC	ENSMUSG00000024474.8	novel	1636	17	NA	NA	3079	-728	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAATACAGCGAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	36881742	36889644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886713_36887605_36887692_36888478_36888559_36888749_36888808_36889600
ENSMUSG00000024474.8_36881973_36889933_1	chr18	+	1114	13	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	3309	-439	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAATGATAAGGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	36881972	36889933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887692_36888478_36888559_36888749_36888808_36889600_36889690_36889874
ENSMUSG00000024474.8_36881978_36889930_1	chr18	+	1094	12	NNC	ENSMUSG00000024474.8	novel	1636	17	NA	NA	3314	-442	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAACCAATGATAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	36881977	36889930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886713_36887605_36887692_36888478_36888559_36888749_36888808_36889600_36889690_36889874
ENSMUSG00000024474.8_36882265_36889983_1	chr18	+	1102	11	NNC	ENSMUSG00000024474.8	novel	1636	17	NA	NA	3601	-389	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTAGACTCTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	36882264	36889983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36887584_36887692_36888478_36888559_36888749_36888808_36889600_36889690_36889874
ENSMUSG00000024474.8_36882265_36890372_1	chr18	+	1124	12	NNC	ENSMUSG00000024474.8	novel	1636	17	NA	NA	3601	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCGGCATCCCTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	36882264	36890372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886713_36887605_36887692_36888478_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336
ENSMUSG00000024474.8_36882455_36890482_1	chr18	+	1074	13	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	3791	110	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATCTCTAGTTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	36882454	36890482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887692_36888478_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ENSMUSG00000024474.8_36884157_36890545_1	chr18	+	1103	11	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	5493	-147	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACGGTTGCAAACTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	36884156	36890545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36887584_36887692_36888478_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ENSMUSG00000024474.8_36884168_36890583_1	chr18	+	1116	11	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	5504	-109	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTATTGTATAACTC	NA	NA	NA	NA	NA	NA	NA	NA	36884167	36890583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_36884321_36885409_36885519_36886314_36886355_36886479_36886713_36887605_36887692_36888478_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ENSMUSG00000024474.8_36884217_36890587_1	chr18	+	1085	11	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	5553	-105	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTGTATAACTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	36884216	36890587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36887584_36887692_36888478_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ENSMUSG00000024474.8_36884230_36890688_1	chr18	+	1171	12	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	5566	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	36884229	36890688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887692_36888478_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ENSMUSG00000024474.8_36884256_36890688_1	chr18	+	1147	11	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	5592	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	36884255	36890688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36887584_36887692_36888478_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ENSMUSG00000024474.8_36884257_36890688_1	chr18	+	1132	11	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	5593	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	36884256	36890688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_36884321_36885409_36885519_36886314_36886355_36886479_36886713_36887605_36887692_36888478_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ENSMUSG00000024474.8_36884290_36890692_1	chr18	+	1115	12	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	5626	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTGTTGGGCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	36884289	36890692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887692_36888478_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ENSMUSG00000024479.4_54435463_54464293_1	chr15	+	687	4	NNC	ENSMUSG00000024479.4	novel	770	4	NA	NA	78	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCATTTTGTTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	54435462	54464293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_54435606_54451719_54451881_54461806_54461963_54464066
ENSMUSG00000024479.4_54435463_54464293_2	chr15	+	697	4	NNC	ENSMUSG00000024479.4	novel	770	4	NA	NA	78	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCATTTTGTTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	54435462	54464293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_54435606_54451709_54451881_54461806_54461963_54464066
ENSMUSG00000024479.4_54435463_54464293_3	chr15	+	689	4	NNC	ENSMUSG00000024479.4	novel	770	4	NA	NA	78	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCATTTTGTTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	54435462	54464293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_54435601_54451709_54451881_54461806_54461963_54464069
ENSMUSG00000024479.4_54435463_54464293_4	chr15	+	692	4	FSM	ENSMUSG00000024479.4	ENST00000531508.1	770	4	78	0	78	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCATTTTGTTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	54435462	54464293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_54435601_54451709_54451881_54461806_54461963_54464066
ENSMUSG00000024480.10_46874980_46923896_1	chr18	+	1479	6	NNC	ENSMUSG00000024480.10	novel	1520	6	NA	NA	15	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGCCTCCCATTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	46874979	46923896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_46875149_46887444_46887530_46891069_46891182_46912254_46912327_46913727_46913836_46922963
ENSMUSG00000024481.6_46983310_47006975_1	chr18	+	1045	4	ISM	ENSMUSG00000024481.6	ENSMUST00000234519.2	2053	9	204	7828	58	-7828	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGGCATTTAAAGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	46983309	47006975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_46983945_46997739_46997883_46999464_46999605_47006848
ENSMUSG00000024481.6_46983522_47011409_1	chr18	+	1102	6	ISM	ENSMUSG00000024481.6	ENSMUST00000234519.2	2053	9	416	3394	270	-3394	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAATTTAAACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	46983521	47011409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_46983945_46997739_46997883_46999464_46999605_47006848_47006976_47009949_47010105_47011295
ENSMUSG00000024481.6_46983628_47013712_1	chr18	+	1024	7	ISM	ENSMUSG00000024481.6	ENSMUST00000234519.2	2053	9	522	1091	376	-1091	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAATTCTCGGAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	46983627	47013712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_46983945_46997739_46997883_46999464_46999605_47006848_47006976_47009949_47010105_47011295_47011410_47013684
ENSMUSG00000024481.6_46983687_47013757_1	chr18	+	1010	7	ISM	ENSMUSG00000024481.6	ENSMUST00000234519.2	2053	9	581	1046	435	-1046	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGCAGTGGAAAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	46983686	47013757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_46983945_46997739_46997883_46999464_46999605_47006848_47006976_47009949_47010105_47011295_47011410_47013684
ENSMUSG00000024481.6_46983858_47014508_1	chr18	+	1006	9	FSM	ENSMUSG00000024481.6	ENSMUST00000234519.2	2053	9	752	295	606	-295	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGCAAGATGACCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46983857	47014508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_46983945_46997739_46997883_46999464_46999605_47006848_47006976_47009949_47010105_47011295_47011410_47013684_47013829_47014324_47014391_47014478
ENSMUSG00000024481.6_46983882_47015296_1	chr18	+	1044	10	ISM	ENSMUSG00000024481.6	ENST00000357872.9	2766	18	630	12826	630	493	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGCCAGCAACAGTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	46983881	47015296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_46983945_46997739_46997883_46999464_46999605_47006848_47006976_47009949_47010105_47011295_47011410_47013684_47013829_47014324_47014391_47014478_47014545_47015270
ENSMUSG00000024481.6_46997769_47015379_1	chr18	+	1035	9	ISM	ENSMUSG00000024481.6	ENST00000357872.9	2766	18	14517	12743	14517	576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGTCGTTAAACAAGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	46997768	47015379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_46997883_46999464_46999605_47006848_47006976_47009949_47010105_47011295_47011410_47013684_47013829_47014324_47014391_47014478_47014545_47015270
ENSMUSG00000024481.6_46999557_47018135_1	chr18	+	1020	10	ISM	ENSMUSG00000024481.6	ENSMUST00000025358.4	5016	20	16452	22174	16305	3332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACTTCAATGTGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	46999556	47018135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_46999605_47006848_47006976_47009949_47010105_47011295_47011410_47013684_47013829_47014324_47014391_47014478_47014545_47015270_47015444_47017485_47017563_47018085
ENSMUSG00000024481.6_47006847_47020238_1	chr18	+	1120	10	ISM	ENSMUSG00000024481.6	ENSMUST00000025358.4	5016	20	23742	20071	23595	5435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTCTTTTCTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	47006846	47020238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_47006976_47009949_47010105_47011295_47011410_47013684_47013829_47014324_47014391_47014478_47014545_47015270_47015444_47017485_47017563_47018085_47018226_47020182
ENSMUSG00000024481.6_47010004_47022539_1	chr18	+	1024	10	ISM	ENSMUSG00000024481.6	ENSMUST00000025358.4	5016	20	26899	17770	26752	-5583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAACTTGATAAACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	47010003	47022539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_47010105_47011295_47011410_47013684_47013829_47014324_47014391_47014478_47014545_47015270_47015444_47017485_47017563_47018085_47018226_47020182_47020239_47022452
ENSMUSG00000024481.6_47011294_47023990_1	chr18	+	1087	10	ISM	ENSMUSG00000024481.6	ENSMUST00000025358.4	5016	20	28189	16319	28042	-4132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTTTTAAGTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	47011293	47023990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_47011410_47013684_47013829_47014324_47014391_47014478_47014545_47015270_47015444_47017485_47017563_47018085_47018226_47020182_47020239_47022452_47022607_47023895
ENSMUSG00000024481.6_47013781_47027661_1	chr18	+	1014	11	ISM	ENSMUSG00000024481.6	ENSMUST00000025358.4	5016	20	30676	12648	30529	-461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTGCCGTTGCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	47013780	47027661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_47013829_47014324_47014391_47014478_47014545_47015270_47015444_47017485_47017563_47018085_47018226_47020182_47020239_47022452_47022607_47023895_47023991_47026739_47026848_47027630
ENSMUSG00000024481.6_47014323_47027807_1	chr18	+	1114	10	ISM	ENSMUSG00000024481.6	ENSMUST00000025358.4	5016	20	31218	12502	31071	-315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGATGATCGACTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	47014322	47027807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_47014391_47014478_47014545_47015270_47015444_47017485_47017563_47018085_47018226_47020182_47020239_47022452_47022607_47023895_47023991_47026739_47026848_47027630
ENSMUSG00000024481.6_47015332_47028112_1	chr18	+	1050	9	ISM	ENSMUSG00000024481.6	ENSMUST00000025358.4	5016	20	32227	12197	32080	-10	internal_fragment	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAAGGTAAGAAGGAACG	NA	NA	NA	NA	NA	NA	NA	NA	47015331	47028112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_47015444_47017485_47017563_47018085_47018226_47020182_47020239_47022452_47022607_47023895_47023991_47026739_47026848_47027630_47027808_47027981
ENSMUSG00000024483.20_36693664_36708191_1	chr18	+	565	2	ISM	ENSMUSG00000024483.20	ENST00000394722.7	2001	11	-80	32919	0	-32919	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAGACTGGAAGCATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	36693663	36708191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36694109_36708071
ENSMUSG00000024483.20_36693804_36711743_1	chr18	+	529	3	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	167	79769	60	-29367	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAGCTGTGCCCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	36693803	36711743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36694109_36708071_36708223_36711670
ENSMUSG00000024483.20_36693856_36711796_1	chr18	+	530	3	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	219	79716	112	-29314	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACACACACAGTACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	36693855	36711796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36694109_36708071_36708223_36711670
ENSMUSG00000024483.20_36693970_36714161_1	chr18	+	488	4	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	333	77351	226	-26949	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTCGTAAATTACTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	36693969	36714161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120
ENSMUSG00000024483.20_36693987_36711772_1	chr18	+	342	3	ISM	ENSMUSG00000024483.20	ENST00000394722.7	2001	11	243	29338	243	-29338	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCACTGACACGGATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	36693986	36711772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36694109_36708071_36708223_36711703
ENSMUSG00000024483.20_36694018_36714229_1	chr18	+	508	4	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	381	77283	274	-26881	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCTTGTTCAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	36694017	36714229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120
ENSMUSG00000024483.20_36711687_36722505_1	chr18	+	542	4	ISM	ENSMUSG00000024483.20	ENST00000394722.7	2001	11	17943	18605	17943	-18605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCCTAATGGAAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	36711686	36722505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36711828_36714120_36714269_36716664_36716813_36722400
ENSMUSG00000024483.20_36711756_36722548_1	chr18	+	516	4	ISM	ENSMUSG00000024483.20	ENST00000394722.7	2001	11	18012	18562	18012	-18562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTCTTCTAGATCACG	NA	NA	NA	NA	NA	NA	NA	NA	36711755	36722548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36711828_36714120_36714269_36716664_36716813_36722400
ENSMUSG00000024483.20_36716665_36727194_1	chr18	+	534	4	ISM	ENSMUSG00000024483.20	ENST00000394722.7	2001	11	22921	13916	22921	-13916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGATTCCTTTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	36716664	36727194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36716813_36722400_36722635_36724499_36724595_36727137
ENSMUSG00000024483.20_36716738_36727222_1	chr18	+	489	4	ISM	ENSMUSG00000024483.20	ENST00000394722.7	2001	11	22994	13888	22994	-13888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGCTGCCTGTGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	36716737	36727222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36716813_36722400_36722635_36724499_36724595_36727137
ENSMUSG00000024483.20_36716778_36727290_1	chr18	+	517	4	ISM	ENSMUSG00000024483.20	ENST00000394722.7	2001	11	23034	13820	23034	-13820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTTAATGACGAAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	36716777	36727290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36716813_36722400_36722635_36724499_36724595_36727137
ENSMUSG00000024483.20_36722510_36727913_1	chr18	+	517	4	ISM	ENSMUSG00000024483.20	ENST00000394722.7	2001	11	28766	13197	28766	-13197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGGCTTTTCTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	36722509	36727913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36722635_36724499_36724595_36727137_36727376_36727854
ENSMUSG00000024483.20_36722543_36727987_1	chr18	+	558	4	ISM	ENSMUSG00000024483.20	ENST00000394722.7	2001	11	28799	13123	28799	-13123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGGAGGCTTCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	36722542	36727987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36722635_36724499_36724595_36727137_36727376_36727854
ENSMUSG00000024483.20_36724556_36733866_1	chr18	+	517	4	ISM	ENSMUSG00000024483.20	ENST00000394722.7	2001	11	30812	7244	30812	-7244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTTGTGAAAATGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	36724555	36733866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36724595_36727137_36727376_36727854_36728047_36733818
ENSMUSG00000024483.20_36727866_36746903_1	chr18	+	525	5	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	34229	44609	34122	5793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAGCTGCAAAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	36727865	36746903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885
ENSMUSG00000024483.20_36727929_36746948_1	chr18	+	507	5	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	34292	44564	34185	5838	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGATTATCCAAATAATGT	NA	NA	NA	NA	NA	NA	NA	NA	36727928	36746948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885
ENSMUSG00000024483.20_36727989_36747006_1	chr18	+	505	5	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	34352	44506	34245	5896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCGTCACAAGATGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	36727988	36747006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885
ENSMUSG00000024483.20_36733853_36747870_1	chr18	+	539	5	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	40216	43642	40109	6760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTTGTTGAATTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	36733852	36747870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767
ENSMUSG00000024483.20_36744853_36757665_1	chr18	+	567	5	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	51216	33847	51109	16555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAGCTGAATGAACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	36744852	36757665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561
ENSMUSG00000024483.20_36746962_36757869_1	chr18	+	479	3	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	53325	33643	53218	16759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTTACCAAAGAATACTT	NA	NA	NA	NA	NA	NA	NA	NA	36746961	36757869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36747030_36747767_36747871_36757561
ENSMUSG00000024483.20_36747814_36758075_1	chr18	+	571	2	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	54177	33437	54070	16965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTGACTTTGTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	36747813	36758075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36747871_36757561
ENSMUSG00000024483.20_36757832_36765168_1	chr18	+	538	2	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	64195	26344	64088	24058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGTCCTACACCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	36757831	36765168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36758321_36765119
ENSMUSG00000024483.20_36758079_36765813_1	chr18	+	553	4	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	64442	25699	64335	24703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTTGGATAAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	36758078	36765813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36758321_36765119_36765266_36765402_36765515_36765760
ENSMUSG00000024483.20_36765209_36767699_1	chr18	+	513	5	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	71572	23813	71465	-23813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCCGCAGTGAAATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	36765208	36767699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644
ENSMUSG00000024483.20_36765803_36771335_1	chr18	+	539	4	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	72166	20177	72059	-20177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCAATGCACCTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	36765802	36771335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36765907_36767279_36767423_36767644_36767859_36771257
ENSMUSG00000024483.20_36765874_36771382_1	chr18	+	515	4	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	72237	20130	72130	-20130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGCAGCAGACAAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	36765873	36771382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36765907_36767279_36767423_36767644_36767859_36771257
ENSMUSG00000024483.20_36767349_36771654_1	chr18	+	520	4	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	73712	19858	73605	-19858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGGTGGTCATTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	36767348	36771654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36767423_36767644_36767859_36771257_36771434_36771598
ENSMUSG00000024483.20_36771377_36776041_1	chr18	+	496	5	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	77740	15471	77633	-15471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAGAGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	36771376	36776041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978
ENSMUSG00000024483.20_36773329_36777498_1	chr18	+	556	4	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	79692	14014	79585	-14014	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTACCTGAGCCACATAT	NA	NA	NA	NA	NA	NA	NA	NA	36773328	36777498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36773414_36774629_36774747_36775978_36776148_36777313
ENSMUSG00000024483.20_36776044_36777705_1	chr18	+	496	2	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	82407	13807	82300	-13807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACAGTTGTCAGTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	36776043	36777705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36776148_36777313
ENSMUSG00000024483.20_36777586_36780225_1	chr18	+	509	4	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	83949	11287	83842	-11287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTTATTCAAGATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	36777585	36780225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36777768_36778157_36778293_36779743_36779894_36780183
ENSMUSG00000024483.20_36777638_36780290_1	chr18	+	522	4	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	84001	11222	83894	-11222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCAGCACCAAGTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	36777637	36780290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36777768_36778157_36778293_36779743_36779894_36780183
ENSMUSG00000024483.20_36777714_36780353_1	chr18	+	509	4	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	84077	11159	83970	-11159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAATGCATTTCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	36777713	36780353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36777768_36778157_36778293_36779743_36779894_36780183
ENSMUSG00000024483.20_36778239_36780487_1	chr18	+	508	3	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	84602	11025	84495	-11025	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTAGCTTATCCTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	36778238	36780487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36778293_36779743_36779894_36780183
ENSMUSG00000024483.20_36781728_36791097_1	chr18	+	518	4	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	88091	415	87984	-415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTGTTCAATGGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	36781727	36791097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36781794_36788526_36788731_36789738_36789916_36791026
ENSMUSG00000024483.20_36788563_36791512_1	chr18	+	570	4	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	94926	0	94819	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGAAGGTCTTTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	36788562	36791512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36788731_36789738_36789916_36791026_36791192_36791452
ENSMUSG00000024486.7_36638269_36640540_1	chr18	-	1279	3	ISM	ENSMUSG00000024486.7	ENSMUST00000025363.7	2375	6	8318	289	8318	-289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAGTTTGGAGAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	36640540	36638268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36639418_36639687_36639779_36640501
ENSMUSG00000024486.7_36638320_36640611_1	chr18	-	1299	3	ISM	ENSMUSG00000024486.7	ENSMUST00000025363.7	2375	6	8247	340	8247	-340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATCCTGCTGTTCTTCGG	NA	NA	NA	NA	NA	NA	NA	NA	36640611	36638319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36639418_36639687_36639779_36640501
ENSMUSG00000024486.7_36638479_36645692_1	chr18	-	1269	4	ISM	ENSMUSG00000024486.7	ENSMUST00000025363.7	2375	6	3166	499	3166	-499	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGTGCTGATGTTAGCG	NA	NA	NA	NA	NA	NA	NA	NA	36645692	36638478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36639418_36639687_36639779_36640501_36640658_36645609
ENSMUSG00000024486.7_36638674_36648233_1	chr18	-	1263	5	ISM	ENSMUSG00000024486.7	ENSMUST00000025363.7	2375	6	625	694	625	-694	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTATTTGCTCTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	36648233	36638673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36639418_36639687_36639779_36640501_36640658_36645609_36645788_36648139
ENSMUSG00000024486.7_36638807_36648581_1	chr18	-	1271	6	FSM	ENSMUSG00000024486.7	ENSMUST00000025363.7	2375	6	277	827	277	-827	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTCTATGTATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	36648581	36638806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_36639418_36639687_36639779_36640501_36640658_36645609_36645788_36648139_36648314_36648520
ENSMUSG00000024486.7_36638937_36648701_1	chr18	-	1261	6	FSM	ENSMUSG00000024486.7	ENSMUST00000025363.7	2375	6	157	957	157	-957	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATACCGCAAGCTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	36648701	36638936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_36639418_36639687_36639779_36640501_36640658_36645609_36645788_36648139_36648314_36648520
ENSMUSG00000024487.6_40338812_40340833_1	chr18	-	736	2	ISM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	11649	1863	11649	-1863	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTAGAGCTTTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	40340833	40338811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_40339454_40340739
ENSMUSG00000024487.6_40338880_40340887_1	chr18	-	722	2	ISM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	11595	1931	11595	-1931	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAGAAAATAGTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	40340887	40338879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_40339454_40340739
ENSMUSG00000024487.6_40338947_40340922_1	chr18	-	690	2	ISM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	11560	1998	11560	-1998	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAACAACCCAGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	40340922	40338946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_40339454_40340739
ENSMUSG00000024487.6_40339088_40345120_1	chr18	-	719	4	ISM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	7362	2139	7362	-2139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGCTCACACAGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	40345120	40339087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095
ENSMUSG00000024487.6_40339139_40345179_1	chr18	-	727	4	ISM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	7303	2190	7303	-2190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAGTTGAACACCGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	40345179	40339138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095
ENSMUSG00000024487.6_40339253_40351833_1	chr18	-	737	5	ISM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	649	2304	649	-2304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAAAAAGGACCTTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	40351833	40339252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798
ENSMUSG00000024487.6_40339399_40352391_1	chr18	-	787	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	91	2450	91	-2450	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCCAAAATTTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	40352391	40339398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
ENSMUSG00000024493.10_42335363_42350027_1	chr18	-	977	6	ISM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	34421	-197	34421	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTTTTAATCTTTATAC	NA	NA	NA	NA	NA	NA	NA	NA	42350027	42335362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916
ENSMUSG00000024493.10_42335692_42351711_1	chr18	-	932	8	ISM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	32737	132	32737	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTCCGAGAACGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	42351711	42335691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568
ENSMUSG00000024493.10_42343159_42354596_1	chr18	-	908	9	ISM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	29852	7599	29852	-7599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCGACATCAGGCAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	42354596	42343158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543
ENSMUSG00000024493.10_42344228_42354727_1	chr18	-	980	8	ISM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	29721	8668	29721	-8668	internal_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGGAAGACGCCATAT	NA	NA	NA	NA	NA	NA	NA	NA	42354727	42344227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543
ENSMUSG00000024493.10_42345573_42358882_1	chr18	-	948	8	ISM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	25566	10013	25566	-10013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGGCCAGGGATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	42358882	42345572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818
ENSMUSG00000024493.10_42347824_42361140_1	chr18	-	972	9	ISM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	23308	12264	23308	-12264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCGAGTATGGACGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	42361140	42347823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070
ENSMUSG00000024493.10_42349973_42354625_1	chr18	-	510	5	ISM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	29823	14413	29823	-14413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTACCCCGTCTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	42354625	42349972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543
ENSMUSG00000024493.10_42350533_42361752_1	chr18	-	922	8	ISM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	22696	14973	22696	-14973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGTCATCCTTTAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	42361752	42350532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722
ENSMUSG00000024493.10_42351569_42362776_1	chr18	-	973	8	ISM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	21672	16009	21672	-16009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACACCATTGGGTTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	42362776	42351568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693
ENSMUSG00000024493.10_42352922_42363092_1	chr18	-	985	9	ISM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	21356	17362	21356	-17362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTATTCTTTTGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	42363092	42352921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006
ENSMUSG00000024493.10_42354635_42367698_1	chr18	-	933	10	ISM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	16750	19075	16750	-19075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGTAGAGTGGGTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	42367698	42354634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645
ENSMUSG00000024493.10_42361238_42375002_1	chr18	-	893	11	ISM	ENSMUSG00000024493.10	ENST00000674398.1	3424	30	9446	25678	9446	-25678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTCCATTTCCTAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	42375002	42361237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967
ENSMUSG00000024493.10_42361801_42375122_1	chr18	-	889	10	ISM	ENSMUSG00000024493.10	ENST00000674398.1	3424	30	9326	26241	9326	-26241	internal_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCGTTCTACACAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	42375122	42361800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967
ENSMUSG00000024493.10_42361848_42375176_1	chr18	-	896	10	ISM	ENSMUSG00000024493.10	ENST00000674398.1	3424	30	9272	26288	9272	-26288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGATGAACAGTGGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	42375176	42361847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967
ENSMUSG00000024493.10_42362693_42375836_1	chr18	-	968	10	ISM	ENSMUSG00000024493.10	ENST00000674398.1	3424	30	8612	27133	8612	-27133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCAAACTTCTCATACTT	NA	NA	NA	NA	NA	NA	NA	NA	42375836	42362692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768
ENSMUSG00000024493.10_42367673_42376902_1	chr18	-	458	6	ISM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	7546	32113	7546	-32113	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATTTAAGAGGATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	42376902	42367672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42376031_42376096_42376841
ENSMUSG00000024493.10_42367673_42377975_1	chr18	-	966	9	ISM	ENSMUSG00000024493.10	ENST00000674398.1	3424	30	6473	32113	6473	-32113	internal_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATTTAAGAGGATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	42377975	42367672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813
ENSMUSG00000024493.10_42369803_42383974_1	chr18	-	941	8	ISM	ENSMUSG00000024493.10	ENST00000674398.1	3424	30	474	34243	474	-34243	internal_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGACTTTGCTGTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	42383974	42369802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893
ENSMUSG00000024493.10_42369853_42379045_1	chr18	-	419	5	ISM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	5403	34293	5403	-34293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGGTGGTCTACGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	42379045	42369852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42369892_42376031_42376096_42376841_42376955_42377813_42377976_42379004
ENSMUSG00000024493.10_42375085_42390221_1	chr18	-	910	9	ISM	ENSMUSG00000024493.10	ENSMUST00000097590.5	3980	32	5038	39722	5038	-39525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACAGCAAATGGAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	42390221	42375084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134
ENSMUSG00000024493.10_42375769_42395156_1	chr18	-	970	9	ISM	ENSMUSG00000024493.10	ENSMUST00000097590.5	3980	32	103	40406	103	-40209	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTTTGTTAAAAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	42395156	42375768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ENSMUSG00000024493.10_42376840_42395259_1	chr18	-	943	7	ISM	ENSMUSG00000024493.10	ENSMUST00000097590.5	3980	32	0	41477	0	-41280	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCGTTTCCTTTCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	42395259	42376839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ENSMUSG00000024498.17_42652431_42685619_1	chr18	+	1949	13	ISM	ENSMUSG00000024498.17	ENST00000679501.2	4232	23	7856	23026	7856	-23000	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCGAGAAAGGGCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	42652430	42685619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556
ENSMUSG00000024498.17_42652481_42708079_1	chr18	+	3491	21	ISM	ENSMUSG00000024498.17	ENSMUST00000237602.2	4417	22	7929	779	7906	-540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGCAGTGTTACTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	42652480	42708079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUSG00000024498.17_42652524_42708184_1	chr18	+	3553	21	ISM	ENSMUSG00000024498.17	ENSMUST00000237602.2	4417	22	7972	674	7949	-435	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGCGGGTAAAAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	42652523	42708184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUSG00000024498.17_42656037_42694079_1	chr18	+	1907	14	ISM	ENSMUSG00000024498.17	ENST00000679501.2	4232	23	11462	14566	11462	-14540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCAAAAAAATGATGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	42656036	42694079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998
ENSMUSG00000024498.17_42656046_42708339_1	chr18	+	3506	20	ISM	ENSMUSG00000024498.17	ENSMUST00000237602.2	4417	22	11494	519	11471	-280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTACCCCAGGAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	42656045	42708339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUSG00000024498.17_42657004_42697255_1	chr18	+	1912	14	ISM	ENSMUSG00000024498.17	ENST00000679501.2	4232	23	12429	11390	12429	-11364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAAGAAAGAAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	42657003	42697255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147
ENSMUSG00000024498.17_42657123_42700985_1	chr18	+	1886	15	ISM	ENSMUSG00000024498.17	ENST00000679501.2	4232	23	12548	7660	12548	-7634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTCGATGGAGCAAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	42657122	42700985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935
ENSMUSG00000024498.17_42657132_42708619_1	chr18	+	3526	19	ISM	ENSMUSG00000024498.17	ENSMUST00000237602.2	4417	22	12580	239	12557	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	42657131	42708619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUSG00000024498.17_42657189_42708676_1	chr18	+	3526	19	ISM	ENSMUSG00000024498.17	ENSMUST00000237602.2	4417	22	12637	182	12614	31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTATTTTTTCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	42657188	42708676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUSG00000024498.17_42657266_42701510_1	chr18	+	1876	16	ISM	ENSMUSG00000024498.17	ENST00000679501.2	4232	23	12691	7135	12691	-7109	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGAGCTGGAGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	42657265	42701510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492
ENSMUSG00000024498.17_42657327_42701571_1	chr18	+	1876	16	ISM	ENSMUSG00000024498.17	ENST00000679501.2	4232	23	12752	7074	12752	-7048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAAGGCGCGCTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	42657326	42701571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492
ENSMUSG00000024498.17_42657385_42701618_1	chr18	+	1865	16	ISM	ENSMUSG00000024498.17	ENST00000679501.2	4232	23	12810	7027	12810	-7001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAGCACAAACGGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	42657384	42701618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492
ENSMUSG00000024498.17_42663799_42704144_1	chr18	+	1868	16	ISM	ENSMUSG00000024498.17	ENST00000679501.2	4232	23	19224	4501	19224	-4475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGGTCCTTATTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	42663798	42704144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079
ENSMUSG00000024498.17_42663876_42704215_1	chr18	+	1862	16	ISM	ENSMUSG00000024498.17	ENST00000679501.2	4232	23	19301	4430	19301	-4404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGGGAGCACTTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	42663875	42704215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079
ENSMUSG00000024498.17_42669358_42707633_1	chr18	+	1884	17	ISM	ENSMUSG00000024498.17	ENST00000679501.2	4232	23	24783	1012	24783	-986	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTGCAGAATGACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	42669357	42707633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUSG00000024498.17_42669970_42707739_1	chr18	+	1861	16	ISM	ENSMUSG00000024498.17	ENST00000679501.2	4232	23	25395	906	25395	-880	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTCCCACAGCATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	42669969	42707739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUSG00000024498.17_42682932_42708095_1	chr18	+	1868	13	ISM	ENSMUSG00000024498.17	ENST00000679501.2	4232	23	38357	550	38357	-524	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAAGACAGGAGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	42682931	42708095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUSG00000024498.17_42686447_42708395_1	chr18	+	1912	9	ISM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	41881	224	41872	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAACTAACATGTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	42686446	42708395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUSG00000024498.17_42694041_42708619_1	chr18	+	1978	8	ISM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	49475	0	49466	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	42694040	42708619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUSG00000024500.21_42821367_43032514_1	chr18	-	1022	7	ISM	ENSMUSG00000024500.21	ENST00000394411.9	2622	10	59	43573	59	-42574	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACCACCACGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	43032514	42821366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_42821532_42834534_42834713_42864851_42864965_42870965_42871132_42874160_42874259_43031809_43032004_43032406
ENSMUSG00000024501.21_43456645_43458854_1	chr18	-	906	2	ISM	ENSMUSG00000024501.21	ENSMUST00000118043.8	1986	14	47483	-647	47483	647	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACAGATGAACAAATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	43458854	43456644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43457486_43458789
ENSMUSG00000024501.21_43456672_43458934_1	chr18	-	959	2	ISM	ENSMUSG00000024501.21	ENSMUST00000118043.8	1986	14	47403	-620	47403	620	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTATTCCCAGCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	43458934	43456671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43457486_43458789
ENSMUSG00000024501.21_43456763_43458954_1	chr18	-	888	2	ISM	ENSMUSG00000024501.21	ENSMUST00000118043.8	1986	14	47383	-529	47383	529	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACCATGTATTGAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	43458954	43456762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43457486_43458789
ENSMUSG00000024501.21_43456876_43461527_1	chr18	-	911	3	ISM	ENSMUSG00000024501.21	ENSMUST00000118043.8	1986	14	44810	-416	44810	416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTCACATATGGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	43461527	43456875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43457486_43458789_43458953_43461389
ENSMUSG00000024501.21_43457041_43462926_1	chr18	-	959	4	ISM	ENSMUSG00000024501.21	ENSMUST00000118043.8	1986	14	43411	-251	43411	251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAATGAAGGCACGAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	43462926	43457040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43457486_43458789_43458953_43461389_43461570_43462755
ENSMUSG00000024501.21_43466970_43570947_1	chr18	-	958	9	ISM	ENSMUSG00000024501.21	ENSMUST00000121805.9	5479	14	404	12921	404	-9617	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATCAACTCCTTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	43570947	43466969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43467103_43475306_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43570894
ENSMUSG00000024501.21_43475338_43571058_1	chr18	-	905	8	ISM	ENSMUSG00000024501.21	ENSMUST00000121805.9	5479	14	293	21289	293	-17985	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGATCTCATCTCACAAGC	NA	NA	NA	NA	NA	NA	NA	NA	43571058	43475337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43570894
ENSMUSG00000024501.21_43475387_43571110_1	chr18	-	908	8	ISM	ENSMUSG00000024501.21	ENSMUST00000121805.9	5479	14	241	21338	241	-18034	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACCAACTGCCCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	43571110	43475386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43570894
ENSMUSG00000024501.21_43475393_43526139_1	chr18	-	771	8	ISM	ENSMUSG00000024501.21	ENSMUST00000025379.14	2106	14	303	18040	303	-18040	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCAGCCAGACCAACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	43526139	43475392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43526054
ENSMUSG00000024501.21_43487808_43571351_1	chr18	-	958	5	ISM	ENSMUSG00000024501.21	ENSMUST00000121805.9	5479	14	0	33759	0	-30455	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACAACCCATTTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	43571351	43487807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43570894
ENSMUSG00000024501.21_43491356_43526442_1	chr18	-	770	4	ISM	ENSMUSG00000024501.21	ENSMUST00000025379.14	2106	14	0	34003	0	-34003	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCACTGGAATGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	43526442	43491355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43491464_43494026_43494212_43496567_43496657_43526054
ENSMUSG00000024501.21_43491411_43526442_1	chr18	-	715	4	ISM	ENSMUSG00000024501.21	ENSMUST00000025379.14	2106	14	0	34058	0	-34058	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGAGTGGGCCGATGG	NA	NA	NA	NA	NA	NA	NA	NA	43526442	43491410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43491464_43494026_43494212_43496567_43496657_43526054
ENSMUSG00000024502.11_43664678_43670769_1	chr18	-	401	2	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	53123	1630	53123	33	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCTGTGCAGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	43670769	43664677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43665030_43670720
ENSMUSG00000024502.11_43664856_43680067_1	chr18	-	369	4	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	43825	1808	43825	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGTTGAAAATTCTACAT	NA	NA	NA	NA	NA	NA	NA	NA	43680067	43664855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43665030_43670720_43670792_43673650_43673717_43680009
ENSMUSG00000024502.11_43664918_43680190_1	chr18	-	430	4	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	43702	1870	43702	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCAAGACTATGTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	43680190	43664917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43665030_43670720_43670792_43673650_43673717_43680009
ENSMUSG00000024502.11_43664992_43680139_1	chr18	-	305	4	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	43753	1944	43753	-281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTTAAACCTTCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	43680139	43664991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43665030_43670720_43670792_43673650_43673717_43680009
ENSMUSG00000024502.11_43670721_43682758_1	chr18	-	419	4	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	41134	7673	41134	-6010	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGATTCCATTTATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	43682758	43670720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43670792_43673650_43673717_43680009_43680214_43682680
ENSMUSG00000024502.11_43673651_43685291_1	chr18	-	417	4	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	38601	10603	38601	-8940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTCATTAAACTCAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	43685291	43673650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43673717_43680009_43680214_43682680_43682759_43685222
ENSMUSG00000024502.11_43680147_43691264_1	chr18	-	394	6	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	32628	17099	32628	-15436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTTAAGTGACAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	43691264	43680146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43680214_43682680_43682759_43685222_43685292_43689545_43689612_43690394_43690449_43691204
ENSMUSG00000024502.11_43691214_43700183_1	chr18	-	430	5	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	23709	28166	23709	-26503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTCAAGGTAGGCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	43700183	43691213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43691304_43692158_43692258_43696333_43696418_43698927_43699057_43700155
ENSMUSG00000024502.11_43692201_43698999_1	chr18	-	276	4	ISM	ENSMUSG00000024502.11	ENST00000333010.6	2973	21	121818	27490	24893	-27490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGAATGAGCTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	43698999	43692200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43692258_43695595_43695659_43696333_43696418_43698927
ENSMUSG00000024502.11_43695638_43700187_1	chr18	-	266	4	ISM	ENSMUSG00000024502.11	ENST00000333010.6	2973	21	120630	30927	23705	-30927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACTTTTCATTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	43700187	43695637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43695659_43696333_43696418_43698927_43699057_43700155
ENSMUSG00000024502.11_43696390_43704170_1	chr18	-	386	5	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	19722	33342	19722	-31679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGTACAGGGCCAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	43704170	43696389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43696418_43698927_43699057_43700155_43700276_43701132_43701190_43704118
ENSMUSG00000024502.11_43704122_43710382_1	chr18	-	402	4	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	13510	41074	13510	-39411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTAGGTGAACCATCGGG	NA	NA	NA	NA	NA	NA	NA	NA	43710382	43704121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43704260_43704916_43705064_43708525_43708625_43710364
ENSMUSG00000024502.11_43704192_43710416_1	chr18	-	366	4	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	13476	41144	13476	-39481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAACAAGAGACAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	43710416	43704191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43704260_43704916_43705064_43708525_43708625_43710364
ENSMUSG00000024502.11_43704216_43710502_1	chr18	-	428	4	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	13390	41168	13390	-39505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAACGACCTTGACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	43710502	43704215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43704260_43704916_43705064_43708525_43708625_43710364
ENSMUSG00000024502.11_43705010_43714931_1	chr18	-	397	4	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	8961	41962	8961	-40299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGCCTAGCCAAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	43714931	43705009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43705064_43708525_43708625_43710364_43710575_43714897
ENSMUSG00000024502.11_43708609_43715086_1	chr18	-	415	3	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	8806	45561	8806	-43898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGAATAGCTGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	43715086	43708608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43708625_43710364_43710575_43714897
ENSMUSG00000024502.11_43710459_43715070_1	chr18	-	289	2	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	8822	47411	8822	-45748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTGTCAAGGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	43715070	43710458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43710575_43714897
ENSMUSG00000024502.11_43710519_43715167_1	chr18	-	326	2	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	8725	47471	8725	-45808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCAGACGGGCTATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	43715167	43710518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43710575_43714897
ENSMUSG00000024502.11_43715126_43723747_1	chr18	-	405	2	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	145	52078	145	-50415	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGAGGCCCGGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	43723747	43715125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43715396_43723612
ENSMUSG00000024502.11_43715202_43820577_1	chr18	-	254	2	ISM	ENSMUSG00000024502.11	ENST00000333010.6	2973	21	240	50491	240	-50491	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAGATTCAGAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	43820577	43715201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43715396_43820517
ENSMUSG00000024502.11_43715204_43723797_1	chr18	-	377	2	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	95	52156	95	-50493	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGGAGATTCAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	43723797	43715203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43715396_43723612
ENSMUSG00000024502.11_43715315_43820694_1	chr18	-	258	2	ISM	ENSMUSG00000024502.11	ENST00000333010.6	2973	21	123	50604	123	-50604	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGAGCTTAAAGCCAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	43820694	43715314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_43715396_43820517
ENSMUSG00000024507.7_50261412_50273423_1	chr18	+	244	4	ISM	ENSMUSG00000024507.7	ENSMUST00000025385.7	2684	24	144	55913	144	-55573	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTTGTGAAGACGGC	NA	NA	NA	NA	NA	NA	NA	NA	50261411	50273423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406
ENSMUSG00000024507.7_50279513_50293240_1	chr18	+	288	4	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	3979	35756	3979	-35756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATCAGCCCATGACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	50279512	50293240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_50279645_50288193_50288286_50291451_50291477_50293201
ENSMUSG00000024507.7_50279576_50293278_1	chr18	+	263	4	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	4042	35718	4042	-35718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGAAGATCTGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	50279575	50293278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_50279645_50288193_50288286_50291451_50291477_50293201
ENSMUSG00000024507.7_50279629_50293330_1	chr18	+	262	4	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	4095	35666	4095	-35666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGCCCTGAGCCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	50279628	50293330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_50279645_50288193_50288286_50291451_50291477_50293201
ENSMUSG00000024507.7_50293202_50297701_1	chr18	+	250	3	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	17668	31295	17668	-31295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTCATTTTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	50293201	50297701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_50293331_50295168_50295270_50297681
ENSMUSG00000024507.7_50293231_50297777_1	chr18	+	297	3	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	17697	31219	17697	-31219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCAAAGGATTTGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	50293230	50297777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_50293331_50295168_50295270_50297681
ENSMUSG00000024507.7_50293291_50297819_1	chr18	+	279	3	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	17757	31177	17757	-31177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTGTTTGCCCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	50293290	50297819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_50293331_50295168_50295270_50297681
ENSMUSG00000024507.7_50297785_50305118_1	chr18	+	282	4	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	22251	23878	22251	-23878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATGCTATAATCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	50297784	50305118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_50297919_50299950_50300003_50303786_50303859_50305094
ENSMUSG00000024507.7_50297844_50305162_1	chr18	+	267	4	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	22310	23834	22310	-23834	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTGGTGGAAAACGGAC	NA	NA	NA	NA	NA	NA	NA	NA	50297843	50305162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_50297919_50299950_50300003_50303786_50303859_50305094
ENSMUSG00000024507.7_50299949_50306796_1	chr18	+	296	4	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	24415	22200	24415	-22200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGGGGTAGTCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	50299948	50306796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_50300003_50303786_50303859_50305094_50305199_50306730
ENSMUSG00000024507.7_50303785_50310308_1	chr18	+	314	4	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	28251	18688	28251	-18688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTGTAAGTGACGCGA	NA	NA	NA	NA	NA	NA	NA	NA	50303784	50310308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_50303859_50305094_50305199_50306730_50306797_50310238
ENSMUSG00000024507.7_50311025_50316290_1	chr18	+	295	4	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	35491	12706	35491	-12706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGTGGTAAAGAAAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	50311024	50316290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_50311081_50312113_50312201_50314998_50315086_50316225
ENSMUSG00000024507.7_50315044_50324832_1	chr18	+	235	3	ISM	ENSMUSG00000024507.7	ENSMUST00000025385.7	2684	24	53776	4504	39510	-4164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGATGTGACCATCATC	NA	NA	NA	NA	NA	NA	NA	NA	50315043	50324832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_50315086_50316225_50316365_50324778
ENSMUSG00000024512.5_70373500_70377523_1	chr18	-	1095	3	FSM	ENSMUSG00000024512.5	ENSMUST00000025390.4	1225	3	130	0	130	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGAGTCTTATATTTG	NA	NA	NA	NA	NA	NA	NA	NA	70377523	70373499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_70374387_70375075_70375157_70377396
ENSMUSG00000024516.14_65933642_65950756_1	chr18	+	799	6	NNC	ENSMUSG00000024516.14	novel	860	6	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	988	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCTGCCCAGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	65933641	65950756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_65933783_65942515_65942626_65945741_65945886_65947908_65948029_65949891_65949950_65950530
ENSMUSG00000024519.7_66074761_66102983_1	chr18	-	213	3	FSM	ENSMUSG00000024519.7	ENST00000587244.5	1004	3	220	571	220	-571	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCACCGGCCCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	66102983	66074760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_66074828_66100513_66100628_66102951
ENSMUSG00000024521.9_66591604_66597268_1	chr18	+	1364	3	FSM	ENSMUSG00000024521.9	ENSMUST00000025399.9	2727	3	0	1363	0	117	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGCCATCCTGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	66591603	66597268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_66591884_66593913_66594070_66596340
ENSMUSG00000024521.9_66593911_66597498_1	chr18	+	1317	2	ISM	ENSMUSG00000024521.9	ENSMUST00000236933.2	1012	3	2247	-347	2247	347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATACGTGATTCAGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	66593910	66597498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_66594070_66596340
ENSMUSG00000024527.11_67538081_67540419_1	chr18	-	588	2	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	41823	247	41823	-247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCTCTCGTCATTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	67540419	67538080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67538585_67540335
ENSMUSG00000024527.11_67538133_67540477_1	chr18	-	594	2	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	41765	299	41765	-299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGAGGCCTGTCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	67540477	67538132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67538585_67540335
ENSMUSG00000024527.11_67538258_67542541_1	chr18	-	596	3	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	39701	424	39701	-424	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGAGGGGATGGCCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	67542541	67538257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67538585_67540335_67540531_67542467
ENSMUSG00000024527.11_67538471_67547222_1	chr18	-	585	4	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	35020	637	35020	-637	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCTTAGACGAGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	67547222	67538470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147
ENSMUSG00000024527.11_67540435_67554121_1	chr18	-	590	5	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	28121	2601	28121	-2601	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGCGAGGATGATAGACGA	NA	NA	NA	NA	NA	NA	NA	NA	67554121	67540434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055
ENSMUSG00000024527.11_67540500_67554181_1	chr18	-	585	5	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	28061	2666	28061	-2666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGATCTCCTTTGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	67554181	67540499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055
ENSMUSG00000024527.11_67542599_67556093_1	chr18	-	610	6	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	26149	4765	26149	-4765	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGAGCAGCTGCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	67556093	67542598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014
ENSMUSG00000024527.11_67548586_67559070_1	chr18	-	594	5	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	23172	10752	23172	-10752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCGAGTGATTGGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	67559070	67548585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958
ENSMUSG00000024527.11_67554142_67562206_1	chr18	-	596	5	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	20036	16308	20036	-16308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTTCGACCATTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	67562206	67554141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050
ENSMUSG00000024527.11_67556018_67564750_1	chr18	-	590	4	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	17492	18184	17492	-18184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGTGAGCAGTTGTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	67564750	67556017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67556169_67558958_67559097_67562050_67562325_67564723
ENSMUSG00000024527.11_67556053_67564822_1	chr18	-	627	4	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	17420	18219	17420	-18219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAACACACTCAACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	67564822	67556052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67556169_67558958_67559097_67562050_67562325_67564723
ENSMUSG00000024527.11_67559039_67573318_1	chr18	-	599	5	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	8924	21205	8924	-21205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGAAGCCAATGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	67573318	67559038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251
ENSMUSG00000024527.11_67562106_67573532_1	chr18	-	593	5	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	8710	24272	8710	-24272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTCTTGAAAAACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	67573532	67562105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511
ENSMUSG00000024527.11_67562241_67575457_1	chr18	-	619	6	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	6785	24407	6785	-24407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCGGCCGGGGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	67575457	67562240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379
ENSMUSG00000024527.11_67564762_67575906_1	chr18	-	583	6	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	6336	26928	6336	-26928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGGGTCCCTGTGGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	67575906	67564761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820
ENSMUSG00000024528.9_52598765_52624278_1	chr18	+	1931	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	0	725	0	-725	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGCAATTTTCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	52598764	52624278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
ENSMUSG00000024528.9_52598807_52624345_1	chr18	+	1956	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	42	658	42	-658	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTGTGACTTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	52598806	52624345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
ENSMUSG00000024528.9_52620522_52624540_1	chr18	+	1928	4	ISM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	21757	463	21757	-463	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTCACTTAGGCAAATATT	NA	NA	NA	NA	NA	NA	NA	NA	52620521	52624540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_52620666_52621322_52622044_52623089_52623128_52623515
ENSMUSG00000024528.9_52620522_52624641_1	chr18	+	2029	4	ISM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	21757	362	21757	-362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTCAAACAGGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	52620521	52624641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_52620666_52621322_52622044_52623089_52623128_52623515
ENSMUSG00000024528.9_52620641_52624709_1	chr18	+	1978	4	ISM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	21876	294	21876	-294	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGAAGAGGAGGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	52620640	52624709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_52620666_52621322_52622044_52623089_52623128_52623515
ENSMUSG00000024528.9_52621613_52625003_1	chr18	+	1957	3	ISM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	22848	0	22848	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTATGTGGCCTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	52621612	52625003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_52622044_52623089_52623128_52623515
ENSMUSG00000024529.15_52660061_52661813_1	chr18	-	184	3	ISM	ENSMUSG00000024529.15	ENSMUST00000025409.9	4741	7	933	10922	933	-10920	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCCGCAAAGAGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	52661813	52660060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_52660111_52661350_52661460_52661788
ENSMUSG00000024529.15_52661383_52661890_1	chr18	-	179	2	ISM	ENSMUSG00000024529.15	ENSMUST00000025409.9	4741	7	856	12244	856	-12242	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGCGCTGCGGAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	52661890	52661382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_52661460_52661788
ENSMUSG00000024530.9_67597961_67610137_1	chr18	+	331	4	FSM	ENSMUSG00000024530.9	ENST00000590956.5	332	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGCCTCAGGACAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	67597960	67610137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_67598027_67606810_67606901_67609864_67609936_67610033
ENSMUSG00000024533.18_67663519_67743575_1	chr18	-	532	5	ISM	ENSMUSG00000024533.18	ENST00000409402.8	3860	17	334	40646	285	-39459	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTAGCACAGATCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	67743575	67663518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ENSMUSG00000024535.17_53378800_53523444_1	chr18	+	1363	7	FSM	ENSMUSG00000024535.17	ENSMUST00000165032.9	1977	7	66	548	-41	-451	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATTCTTGTCCTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	53378799	53523444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_53378925_53460483_53460568_53473201_53473307_53516141_53516237_53517688_53517722_53518249_53518315_53522588
ENSMUSG00000024535.17_53378831_53523533_1	chr18	+	1421	7	FSM	ENSMUSG00000024535.17	ENSMUST00000165032.9	1977	7	97	459	-10	-362	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACACCCACGCCGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	53378830	53523533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_53378925_53460483_53460568_53473201_53473307_53516141_53516237_53517688_53517722_53518249_53518315_53522588
ENSMUSG00000024535.17_53378841_53523567_1	chr18	+	1445	7	FSM	ENSMUSG00000024535.17	ENSMUST00000165032.9	1977	7	107	425	0	-328	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACATCACGTATGGATT	NA	NA	NA	NA	NA	NA	NA	NA	53378840	53523567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_53378925_53460483_53460568_53473201_53473307_53516141_53516237_53517688_53517722_53518249_53518315_53522588
ENSMUSG00000024535.17_53473199_53523728_1	chr18	+	1441	5	ISM	ENSMUSG00000024535.17	ENSMUST00000025417.9	994	8	94358	167	94358	-167	intron_retention	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATTTAAATGTGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	53473198	53523728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_53473307_53516141_53516237_53517688_53517722_53518249_53518315_53522588
ENSMUSG00000024535.17_53516138_53523895_1	chr18	+	1504	4	ISM	ENSMUSG00000024535.17	ENSMUST00000025417.9	994	8	137297	0	137297	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	53516137	53523895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_53516237_53517688_53517722_53518249_53518315_53522588
ENSMUSG00000024537.6_67777472_67781262_1	chr18	+	203	3	ISM	ENSMUSG00000024537.6	ENSMUST00000235799.2	1300	7	2801	5970	2801	-5970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTCTCTCAAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	67777471	67781262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_67777551_67779062_67779122_67781197
ENSMUSG00000024537.6_67781858_67786247_1	chr18	+	184	2	ISM	ENSMUSG00000024537.6	ENSMUST00000235799.2	1300	7	7187	985	7187	-985	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTAAAATTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	67781857	67786247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_67782017_67786222
ENSMUSG00000024537.6_67781908_67786300_1	chr18	+	187	2	ISM	ENSMUSG00000024537.6	ENSMUST00000235799.2	1300	7	7237	932	7237	-932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGAGTACCTTAATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	67781907	67786300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_67782017_67786222
ENSMUSG00000024537.6_67781966_67786343_1	chr18	+	172	2	ISM	ENSMUSG00000024537.6	ENSMUST00000235799.2	1300	7	7295	889	7295	-889	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTTTTTTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	67781965	67786343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_67782017_67786222
ENSMUSG00000024537.6_67782000_67787003_1	chr18	+	186	3	ISM	ENSMUSG00000024537.6	ENSMUST00000235799.2	1300	7	7329	229	7329	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGGCTGCTCTTTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	67781999	67787003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_67782017_67786222_67786344_67786955
ENSMUSG00000024538.9_53539404_53551187_1	chr18	-	1401	5	NNC	ENSMUSG00000024538.9	novel	1403	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTGCAAGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	53551187	53539403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_53540138_53542196_53542375_53544053_53544153_53544577_53544692_53550911
ENSMUSG00000024538.9_53539404_53551187_2	chr18	-	1408	5	NNC	ENSMUSG00000024538.9	novel	1403	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTGCAAGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	53551187	53539403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_53540138_53542196_53542382_53544053_53544153_53544577_53544692_53550911
ENSMUSG00000024538.9_53539404_53551187_3	chr18	-	1391	5	NNC	ENSMUSG00000024538.9	novel	1403	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTGCAAGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	53551187	53539403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_53540138_53542196_53542382_53544058_53544153_53544577_53544692_53550923
ENSMUSG00000024538.9_53539404_53551187_4	chr18	-	1396	5	NNC	ENSMUSG00000024538.9	novel	1403	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTGCAAGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	53551187	53539403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_53540138_53542196_53542375_53544058_53544153_53544577_53544692_53550911
ENSMUSG00000024539.18_67798582_67857646_1	chr18	-	1614	10	NNC	ENSMUSG00000024539.18	novel	1613	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTGGTTTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	67857646	67798581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814151_67814484_67814648_67821960_67822060_67828694_67828795_67844906_67844998_67857511
ENSMUSG00000024539.18_67798582_67857646_2	chr18	-	1609	10	NNC	ENSMUSG00000024539.18	novel	1613	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTGGTTTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	67857646	67798581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_67798939_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814151_67814484_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
ENSMUSG00000024539.18_67798582_67857646_3	chr18	-	1615	10	FSM	ENSMUSG00000024539.18	ENST00000591115.5	1613	10	0	-2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTGGTTTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	67857646	67798581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814151_67814484_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
ENSMUSG00000024539.18_67805217_67844997_1	chr18	-	1578	8	ISM	ENSMUSG00000024539.18	ENSMUST00000122412.2	2667	9	12668	935	12646	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGAAATGGGCATTACAA	NA	NA	NA	NA	NA	NA	NA	NA	67844997	67805216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906
ENSMUSG00000024539.18_67805217_67844999_1	chr18	-	1574	8	NNC	ENSMUSG00000024539.18	novel	1616	9	NA	NA	12644	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2078	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGAAATGGGCATTACAA	NA	NA	NA	NA	NA	NA	NA	NA	67844999	67805216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_67805839_67808789_67808957_67810779_67810933_67813915_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906
ENSMUSG00000024539.18_67805217_67844999_2	chr18	-	1573	8	NNC	ENSMUSG00000024539.18	novel	1616	9	NA	NA	12644	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGAAATGGGCATTACAA	NA	NA	NA	NA	NA	NA	NA	NA	67844999	67805216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_67805839_67808796_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906
ENSMUSG00000024544.10_68067142_68387264_1	chr18	+	1078	5	FSM	ENSMUSG00000024544.10	ENST00000677055.1	2486	5	64	1344	57	-348	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCCAGAGCAGCAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	68067141	68387264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_68067319_68197250_68197758_68368725_68368881_68383641_68383696_68387079
ENSMUSG00000024544.10_68067179_68387329_1	chr18	+	1106	5	FSM	ENSMUSG00000024544.10	ENST00000677055.1	2486	5	101	1279	94	-283	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACAGTGACTTGATAGAC	NA	NA	NA	NA	NA	NA	NA	NA	68067178	68387329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_68067319_68197250_68197758_68368725_68368881_68383641_68383696_68387079
ENSMUSG00000024544.10_68067241_68387369_1	chr18	+	1084	5	FSM	ENSMUSG00000024544.10	ENST00000677055.1	2486	5	163	1239	156	-243	multi-exon	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGCCCACCAAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	68067240	68387369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_68067319_68197250_68197758_68368725_68368881_68383641_68383696_68387079
ENSMUSG00000024544.10_68197571_68388716_1	chr18	+	2033	4	FSM	ENSMUSG00000024544.10	ENST00000679177.1	2033	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTGTTTAGCACCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	68197570	68388716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_68197758_68368725_68368881_68383641_68383696_68387079
ENSMUSG00000024544.10_68197571_68388716_2	chr18	+	2028	4	NNC	ENSMUSG00000024544.10	novel	2033	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTGTTTAGCACCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	68197570	68388716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_68197758_68368730_68368881_68383641_68383696_68387079
ENSMUSG00000024544.10_68197624_68387136_1	chr18	+	487	4	ISM	ENSMUSG00000024544.10	ENST00000399848.7	2149	5	130539	1580	53	-476	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCATTCAGTCGTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	68197623	68387136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_68197758_68239621_68239763_68368725_68368881_68387079
ENSMUSG00000024544.10_68197679_68387188_1	chr18	+	484	4	ISM	ENSMUSG00000024544.10	ENST00000399848.7	2149	5	130594	1528	108	-424	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTCCCACCATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	68197678	68387188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_68197758_68239621_68239763_68368725_68368881_68387079
ENSMUSG00000024544.10_68361138_68387612_1	chr18	+	766	3	FSM	ENSMUSG00000024544.10	ENST00000586765.1	842	3	76	0	76	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCTAGAGTGCACTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	68361137	68387612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_68361216_68368725_68368881_68387079
ENSMUSG00000024544.10_68368775_68387249_1	chr18	+	276	2	FSM	ENSMUSG00000024544.10	ENST00000678400.1	1664	2	47	1341	47	-363	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCTACAGCTCCGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	68368774	68387249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_68368881_68387079
ENSMUSG00000024556.5_73903328_73914141_1	chr18	-	751	4	ISM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	34368	354	24096	-354	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACTGCTCTGTTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	73914141	73903327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112
ENSMUSG00000024556.5_73903533_73921440_1	chr18	-	779	6	ISM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	27069	559	16797	-559	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCACAGCCCAGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	73921440	73903532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424
ENSMUSG00000024556.5_73903680_73924185_1	chr18	-	762	7	ISM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	24324	706	14052	-706	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACCACTATTTTTAGACA	NA	NA	NA	NA	NA	NA	NA	NA	73924185	73903679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154
ENSMUSG00000024556.5_73903741_73924232_1	chr18	-	748	7	ISM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	24277	767	14005	-767	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACACCTCCTCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	73924232	73903740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154
ENSMUSG00000024556.5_73903852_73924741_1	chr18	-	735	8	ISM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	23768	878	13496	-878	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTTCCGGTACCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	73924741	73903851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679
ENSMUSG00000024556.5_73908449_73924981_1	chr18	-	755	7	ISM	ENSMUSG00000024556.5	ENST00000639255.1	1434	13	13256	2250	13256	-2250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTCTAAATACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	73924981	73908448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871
ENSMUSG00000024556.5_73914175_73927867_1	chr18	-	741	8	ISM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	20642	11201	10370	-7976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTCCAGGATGGACGAG	NA	NA	NA	NA	NA	NA	NA	NA	73927867	73914174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851
ENSMUSG00000024556.5_73918818_73928013_1	chr18	-	794	7	ISM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	20496	15844	10224	-12619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACAGCACAGGCCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	73928013	73918817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851
ENSMUSG00000024556.5_73921494_73930932_1	chr18	-	743	8	ISM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	17577	18520	7305	-15295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCCCCAGAGAGCATACCT	NA	NA	NA	NA	NA	NA	NA	NA	73930932	73921493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899
ENSMUSG00000024556.5_73921511_73927891_1	chr18	-	381	5	ISM	ENSMUSG00000024556.5	ENST00000639850.1	1482	13	10346	15312	10346	-15312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCATATGCCCATGCGG	NA	NA	NA	NA	NA	NA	NA	NA	73927891	73921510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_73921540_73924679_73924778_73924871_73924982_73927516_73927621_73927851
ENSMUSG00000024556.5_73924154_73931049_1	chr18	-	815	7	ISM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	17460	21180	7188	-17955	internal_fragment	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGGTGCAGAACCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	73931049	73924153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899
ENSMUSG00000024556.5_73924679_73934933_1	chr18	-	835	7	ISM	ENSMUSG00000024556.5	ENST00000639850.1	1482	13	3304	18480	3304	-18480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTTTAAACCTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73934933	73924678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799
ENSMUSG00000024556.5_73924919_73938184_1	chr18	-	751	7	ISM	ENSMUSG00000024556.5	ENST00000639850.1	1482	13	53	18720	53	-18720	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAATATCAACAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	73938184	73924918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122
ENSMUSG00000024556.5_73927569_73948509_1	chr18	-	827	7	ISM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	0	24595	0	-21370	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTCTATGATGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	73948509	73927568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ENSMUSG00000024560.8_74349408_74352493_1	chr18	+	1215	9	ISM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	206	2071	206	-2071	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAGACAAATGGAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	74349407	74352493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453
ENSMUSG00000024560.8_74349469_74352541_1	chr18	+	1202	9	ISM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	267	2023	267	-2023	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTCCCGCAGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	74349468	74352541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453
ENSMUSG00000024560.8_74349523_74352591_1	chr18	+	1198	9	ISM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	321	1973	321	-1973	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCCAAGTATTGTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	74349522	74352591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453
ENSMUSG00000024560.8_74350323_74352968_1	chr18	+	1189	9	ISM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	1121	1596	1121	-1596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAGCACGGCAAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	74350322	74352968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908
ENSMUSG00000024560.8_74350830_74353231_1	chr18	+	1244	8	ISM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	1628	1333	1628	-1333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCGTCTCCTGCGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	74350829	74353231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191
ENSMUSG00000024560.8_74350942_74353477_1	chr18	+	1253	9	ISM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	1740	1087	1740	-1087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGAGGCTGCCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	74350941	74353477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427
ENSMUSG00000024560.8_74351216_74353931_1	chr18	+	1198	10	ISM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	2014	633	2014	-633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTGATGTCTTTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	74351215	74353931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898
ENSMUSG00000024560.8_74351270_74353983_1	chr18	+	1196	10	ISM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	2068	581	2068	-581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTAATCGCCATTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	74351269	74353983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898
ENSMUSG00000024560.8_74351802_74354205_1	chr18	+	1235	9	ISM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	2600	359	2600	-359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGATGCTTCACCAAACG	NA	NA	NA	NA	NA	NA	NA	NA	74351801	74354205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ENSMUSG00000024560.8_74351912_74354205_1	chr18	+	1125	9	ISM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	2710	359	2710	-359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGATGCTTCACCAAACG	NA	NA	NA	NA	NA	NA	NA	NA	74351911	74354205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ENSMUSG00000024560.8_74352202_74354376_1	chr18	+	1159	8	ISM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	3000	188	3000	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTTGATCCTCACCATC	NA	NA	NA	NA	NA	NA	NA	NA	74352201	74354376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ENSMUSG00000024560.8_74352283_74354567_1	chr18	+	1269	8	ISM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	3081	-3	3081	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTCTCTCAATAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	74352282	74354567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ENSMUSG00000024563.17_76374651_76439696_1	chr18	+	3751	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	0	4338	0	51	multi-exon	FALSE	canonical	NA	NA	NA	NA	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCACTGTCAGGTATCA	NA	NA	NA	NA	NA	NA	NA	NA	76374650	76439696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ENSMUSG00000024563.17_76374888_76439885_1	chr18	+	3703	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	237	4149	116	240	multi-exon	FALSE	canonical	NA	NA	NA	NA	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAACTCCCGTTACGTA	NA	NA	NA	NA	NA	NA	NA	NA	76374887	76439885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ENSMUSG00000024563.17_76375117_76437986_1	chr18	+	1828	11	FSM	ENSMUSG00000024563.17	ENST00000262160.11	3459	11	-28	1659	-28	185	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCCAGCGGGGAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	76375116	76437986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_76375304_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ENSMUSG00000024563.17_76375245_76438039_1	chr18	+	1753	11	FSM	ENSMUSG00000024563.17	ENST00000262160.11	3459	11	100	1606	100	238	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAGTATCCCAAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	76375244	76438039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_76375304_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ENSMUSG00000024563.17_76375245_76438102_1	chr18	+	1816	11	FSM	ENSMUSG00000024563.17	ENST00000262160.11	3459	11	100	1543	100	-263	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATTGCAGTACTATGCT	NA	NA	NA	NA	NA	NA	NA	NA	76375244	76438102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_76375304_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ENSMUSG00000024563.17_76395563_76438225_1	chr18	+	1828	10	ISM	ENSMUSG00000024563.17	ENSMUST00000025453.15	2410	11	1371	140	0	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTTATTTTTGTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	76395562	76438225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ENSMUSG00000024563.17_76395668_76438365_1	chr18	+	1863	10	ISM	ENSMUSG00000024563.17	ENSMUST00000025453.15	2410	11	1476	0	105	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATTAACTTGGAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	76395667	76438365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ENSMUSG00000024563.17_76426037_76438916_1	chr18	+	1808	6	ISM	ENSMUSG00000024563.17	ENSMUST00000025453.15	2410	11	31845	-551	30474	551	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTGTATGTAATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	76426036	76438916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ENSMUSG00000024563.17_76435229_76439271_1	chr18	+	1798	3	ISM	ENSMUSG00000024563.17	ENSMUST00000025453.15	2410	11	41037	-906	39666	-374	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTTTGATGCTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	76435228	76439271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_76435288_76435453_76435599_76437677
ENSMUSG00000024566.11_80778062_80793106_1	chr18	-	1638	4	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	167989	-1168	167989	-457	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGTGAATTAAGAAAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	80793106	80778061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033
ENSMUSG00000024566.11_80778290_80796362_1	chr18	-	1667	6	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	164733	-940	164733	-685	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGACCTGAGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	80796362	80778289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206
ENSMUSG00000024566.11_80778749_80805316_1	chr18	-	1647	11	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	155779	-481	155779	481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACAATGCTTTGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	80805316	80778748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276
ENSMUSG00000024566.11_80778868_80805457_1	chr18	-	1669	11	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	155638	-362	155638	362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTATGAATGTAAACCATT	NA	NA	NA	NA	NA	NA	NA	NA	80805457	80778867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276
ENSMUSG00000024566.11_80781934_80820214_1	chr18	-	1637	14	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	140881	2704	140881	-2704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCGGAGTTCCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	80820214	80781933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012
ENSMUSG00000024566.11_80796259_80851960_1	chr18	-	1652	13	ISM	ENSMUSG00000024566.11	ENSMUST00000225980.2	5150	29	125313	18654	109135	-17029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTTGGCCAGTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	80851960	80796258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826
ENSMUSG00000024566.11_80797459_80887817_1	chr18	-	1664	13	ISM	ENSMUSG00000024566.11	ENSMUST00000225980.2	5150	29	89456	19854	73278	-18229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCCACCCAGCTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	80887817	80797458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741
ENSMUSG00000024566.11_80809063_80961038_1	chr18	-	1684	15	ISM	ENSMUSG00000024566.11	ENSMUST00000225980.2	5150	29	16235	31458	57	-29833	internal_fragment	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGTCTTGACCTACTGC	NA	NA	NA	NA	NA	NA	NA	NA	80961038	80809062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919
ENSMUSG00000024566.11_80820218_80851858_1	chr18	-	330	4	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	109237	40988	109237	-40988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGAAGCCAGTCCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	80851858	80820217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80820250_80822067_80822191_80838504_80838648_80851826
ENSMUSG00000024570.8_80235480_80241098_1	chr18	-	1104	5	ISM	ENSMUSG00000024570.8	ENSMUST00000025462.7	1377	6	2775	0	2775	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTGTGTATACGCAC	NA	NA	NA	NA	NA	NA	NA	NA	80241098	80235479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80236098_80236446_80236515_80238233_80238319_80240464_80240578_80240878
ENSMUSG00000024570.8_80235687_80243724_1	chr18	-	1021	6	FSM	ENSMUSG00000024570.8	ENSMUST00000025462.7	1377	6	149	207	149	-207	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGAGCTGCCGCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80243724	80235686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_80236098_80236446_80236515_80238233_80238319_80240464_80240578_80240878_80241099_80243600
ENSMUSG00000024570.8_80235874_80243873_1	chr18	-	983	6	FSM	ENSMUSG00000024570.8	ENSMUST00000025462.7	1377	6	0	394	0	-394	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGGACGCTTCCCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	80243873	80235873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_80236098_80236446_80236515_80238233_80238319_80240464_80240578_80240878_80241099_80243600
ENSMUSG00000024571.16_80250045_80255938_1	chr18	+	1634	4	NNC	ENSMUSG00000024571.16	novel	1683	4	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAAAGGAGTACACGTT	NA	NA	NA	NA	NA	NA	NA	NA	80250044	80255938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_80250117_80250368_80250559_80253276_80253338_80254627
ENSMUSG00000024571.16_80250082_80255938_1	chr18	+	1596	4	NNC	ENSMUSG00000024571.16	novel	1650	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAAAGGAGTACACGTT	NA	NA	NA	NA	NA	NA	NA	NA	80250081	80255938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_80250117_80250368_80250559_80253285_80253346_80254627
ENSMUSG00000024576.15_61688389_61721706_1	chr18	+	2479	12	FSM	ENSMUSG00000024576.15	ENST00000515768.6	2492	12	13	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAAGGTTTGGTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	61688388	61721706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61721431_61721648
ENSMUSG00000024579.8_61830618_61831503_1	chr18	-	499	2	ISM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	9203	710	9203	-710	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACGGCGGAGTGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	61831503	61830617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61831048_61831434
ENSMUSG00000024579.8_61830676_61831549_1	chr18	-	487	2	ISM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	9157	768	9157	-768	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGAAGCCCCTCTTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	61831549	61830675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61831048_61831434
ENSMUSG00000024579.8_61830864_61832523_1	chr18	-	485	3	ISM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	8183	956	8183	-956	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTCCATGGCTACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	61832523	61830863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61831048_61831434_61831576_61832363
ENSMUSG00000024579.8_61830992_61835341_1	chr18	-	484	4	ISM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	5365	1084	5365	-1084	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACGACATCGTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	61835341	61830991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266
ENSMUSG00000024579.8_61831502_61836652_1	chr18	-	531	4	ISM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	4054	1594	4054	-1594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGAAGCTCGCCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	61836652	61831501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61831576_61832363_61832576_61835266_61835442_61836582
ENSMUSG00000024580.9_61848838_61852926_1	chr18	-	563	3	NNC	ENSMUSG00000024580.9	novel	565	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	4220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACAGGTCACTGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	61852926	61848837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_61849167_61851824_61851907_61852774
ENSMUSG00000024580.9_61848838_61852926_2	chr18	-	565	3	FSM	ENSMUSG00000024580.9	ENST00000448626.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACAGGTCACTGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	61852926	61848837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_61849167_61851824_61851907_61852772
ENSMUSG00000024580.9_61848838_61852926_3	chr18	-	560	3	NNC	ENSMUSG00000024580.9	novel	565	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACAGGTCACTGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	61852926	61848837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_61849167_61851824_61851902_61852772
ENSMUSG00000024580.9_61848838_61852926_4	chr18	-	558	3	NNC	ENSMUSG00000024580.9	novel	565	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACAGGTCACTGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	61852926	61848837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_61849160_61851824_61851907_61852772
ENSMUSG00000024581.14_63111051_63132212_1	chr18	+	3110	11	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	14	-309	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAATGGAAAACGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	63111050	63132212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_63111096_63113536_63113605_63115689_63115775_63117091_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ENSMUSG00000024581.14_63113537_63132336_1	chr18	+	3188	11	ISM	ENSMUSG00000024581.14	ENSMUST00000025474.14	3567	12	2635	185	2500	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAGCACATTTAATATAT	NA	NA	NA	NA	NA	NA	NA	NA	63113536	63132336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63113605_63115689_63115775_63116444_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ENSMUSG00000024581.14_63117111_63132521_1	chr18	+	3202	8	ISM	ENSMUSG00000024581.14	ENSMUST00000025474.14	3567	12	6209	0	6074	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAGTTTTATTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	63117110	63132521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ENSMUSG00000024583.4_63797358_63807169_1	chr18	-	201	3	ISM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	18339	3193	18224	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTTACTGCAGTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	63807169	63797357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63797404_63804652_63804758_63807119
ENSMUSG00000024583.4_63808563_63812483_1	chr18	-	205	3	ISM	ENSMUSG00000024583.4	ENSMUST00000025476.4	1998	9	12910	12125	12910	-11386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCCTGTTAAGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	63812483	63808562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63808585_63809949_63810073_63812423
ENSMUSG00000024587.11_64632726_64634505_1	chr18	-	1127	2	ISM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	15174	-3	15081	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	64634505	64632725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64633721_64634373
ENSMUSG00000024587.11_64632854_64634894_1	chr18	-	1079	3	ISM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	14785	125	14692	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGCCTTGCCGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	64634894	64632853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64633721_64634373_64634506_64634814
ENSMUSG00000024587.11_64633040_64637440_1	chr18	-	1091	5	ISM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	12239	311	12146	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGGATGGTGGGTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	64637440	64633039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408
ENSMUSG00000024587.11_64633086_64637501_1	chr18	-	1106	5	ISM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	12178	357	12085	-357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAAATTAATGAAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	64637501	64633085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408
ENSMUSG00000024587.11_64633145_64637544_1	chr18	-	1090	5	ISM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	12135	416	12042	-416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTAGTCTTTTCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	64637544	64633144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408
ENSMUSG00000024587.11_64633284_64638121_1	chr18	-	1154	6	ISM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	11558	555	11465	-555	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTCTGACATCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	64638121	64633283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918
ENSMUSG00000024587.11_64633478_64638370_1	chr18	-	1100	7	ISM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	11309	749	11216	496	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTCCCATTATCAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	64638370	64633477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227
ENSMUSG00000024587.11_64633589_64642357_1	chr18	-	1197	9	ISM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	7322	860	7229	385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGGGCCCTCAAGCACG	NA	NA	NA	NA	NA	NA	NA	NA	64642357	64633588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315
ENSMUSG00000024587.11_64634472_64644771_1	chr18	-	1165	10	ISM	ENSMUSG00000024587.11	ENSMUST00000236186.2	1784	15	4815	498	4815	-498	internal_fragment	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGGCTCGATGCGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	64644771	64634471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681
ENSMUSG00000024587.11_64634892_64644948_1	chr18	-	1147	10	ISM	ENSMUSG00000024587.11	ENSMUST00000236186.2	1784	15	4638	918	4638	-918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTCGCTTTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	64644948	64634891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855
ENSMUSG00000024587.11_64636578_64645120_1	chr18	-	1159	10	ISM	ENSMUSG00000024587.11	ENSMUST00000236186.2	1784	15	4466	2604	4466	-2604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGCGTCCCTTCCTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	64645120	64636577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054
ENSMUSG00000024587.11_64636603_64638316_1	chr18	-	515	4	ISM	ENSMUSG00000024587.11	ENSMUST00000236186.2	1784	15	11270	2629	11270	-2629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTTTCTACGAGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	64638316	64636602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64636693_64637408_64637545_64637918_64638119_64638227
ENSMUSG00000024587.11_64637314_64649497_1	chr18	-	1233	11	ISM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	226	4596	89	-3340	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAATATTTAATACTG	NA	NA	NA	NA	NA	NA	NA	NA	64649497	64637313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUSG00000024587.11_64637987_64649599_1	chr18	-	1036	10	ISM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	124	5269	-13	-4013	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGTTTTTTGTATAGC	NA	NA	NA	NA	NA	NA	NA	NA	64649599	64637986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUSG00000024587.11_64643523_64649599_1	chr18	-	525	6	ISM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	124	10805	-13	-9549	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGGTGGGTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	64649599	64643522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUSG00000024588.11_64590336_64603887_1	chr18	-	1627	7	ISM	ENSMUSG00000024588.11	ENSMUST00000025484.9	2059	10	18247	0	18138	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCTGTGTACGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	64603887	64590335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752
ENSMUSG00000024588.11_64590453_64608276_1	chr18	-	1659	8	ISM	ENSMUSG00000024588.11	ENSMUST00000025484.9	2059	10	13858	117	13749	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCACTGTGGTGACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	64608276	64590452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127
ENSMUSG00000024588.11_64590965_64608276_1	chr18	-	1147	8	ISM	ENSMUSG00000024588.11	ENST00000652755.1	1337	11	13749	-129	13749	129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTTTCCTGGGCGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	64608276	64590964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127
ENSMUSG00000024588.11_64591094_64611841_1	chr18	-	1138	9	ISM	ENSMUSG00000024588.11	ENST00000652755.1	1337	11	10184	0	10184	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATGGGGACAGAAGCCACG	NA	NA	NA	NA	NA	NA	NA	NA	64611841	64591093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721
ENSMUSG00000024588.11_64591200_64616477_1	chr18	-	1105	10	ISM	ENSMUSG00000024588.11	ENSMUST00000237358.2	1753	11	6845	407	5548	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTGCAGGAAGACTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	64616477	64591199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404
ENSMUSG00000024588.11_64594592_64622012_1	chr18	-	1048	9	ISM	ENSMUSG00000024588.11	ENSMUST00000237502.2	2630	10	132	4256	13	-3498	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCGGGCCTATATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	64622012	64594591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
ENSMUSG00000024588.11_64594592_64622122_1	chr18	-	1158	9	ISM	ENSMUSG00000024588.11	ENSMUST00000237502.2	2630	10	22	4256	-1	-3498	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCGGGCCTATATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	64622122	64594591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
ENSMUSG00000024588.11_64603812_64616461_1	chr18	-	423	4	ISM	ENSMUSG00000024588.11	ENST00000652755.1	1337	11	5564	12718	5564	-12718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTAGAGAGGGCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	64616461	64603811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_64603888_64608127_64608277_64611721_64611842_64616383
ENSMUSG00000024589.19_65217572_65291072_1	chr18	+	667	5	ISM	ENSMUSG00000024589.19	ENST00000635997.1	4363	27	1005	55315	1005	-54885	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTTGATGTGAGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	65217571	65291072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_65217866_65276866_65276918_65288326_65288389_65288716_65288820_65290915
ENSMUSG00000024589.19_65290914_65306106_1	chr18	+	809	6	ISM	ENSMUSG00000024589.19	ENST00000675865.1	4454	28	134086	41405	74347	-39851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAAGGGCCGCCTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	65290913	65306106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986
ENSMUSG00000024589.19_65294586_65324574_1	chr18	+	821	8	ISM	ENSMUSG00000024589.19	ENST00000676024.1	4302	28	273620	22937	78019	-21383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAATGACGTCTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	65294585	65324574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65314398_65314454_65319396_65319456_65324507
ENSMUSG00000024589.19_65296096_65326236_1	chr18	+	744	8	ISM	ENSMUSG00000024589.19	ENST00000676024.1	4302	28	275130	21275	79529	-19721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTCCTAAAGGCTAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	65296095	65326236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65314398_65314454_65319396_65319456_65324507_65324574_65326146
ENSMUSG00000024589.19_65296133_65326302_1	chr18	+	773	8	ISM	ENSMUSG00000024589.19	ENST00000676024.1	4302	28	275167	21209	79566	-19655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAATGGTTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	65296132	65326302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65314398_65314454_65319396_65319456_65324507_65324574_65326146
ENSMUSG00000024589.19_65296204_65326342_1	chr18	+	742	8	ISM	ENSMUSG00000024589.19	ENST00000676024.1	4302	28	275238	21169	79637	-19615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTACTATGGCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	65296203	65326342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65314398_65314454_65319396_65319456_65324507_65324574_65326146
ENSMUSG00000024589.19_65305985_65331797_1	chr18	+	821	8	ISM	ENSMUSG00000024589.19	ENST00000676024.1	4302	28	285019	15714	89418	-14160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGGGTTCGTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	65305984	65331797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_65306107_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701
ENSMUSG00000024589.19_65338704_65346260_1	chr18	+	805	6	ISM	ENSMUSG00000024589.19	ENST00000635997.1	4363	27	122137	127	122137	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACAATGAATGGAATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	65338703	65346260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ENSMUSG00000024589.19_65341461_65346388_1	chr18	+	814	4	ISM	ENSMUSG00000024589.19	ENST00000635997.1	4363	27	124894	-1	124894	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATATTTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	65341460	65346388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_65341571_65342723_65342821_65343333_65343407_65345854
ENSMUSG00000024590.9_56840885_56876298_1	chr18	+	1705	8	ISM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	0	10198	0	-10198	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGGGAGATGATCAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	56840884	56876298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282
ENSMUSG00000024590.9_56841306_56885758_1	chr18	+	1684	11	FSM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	421	738	421	-738	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAGTCCTGTATACAGT	NA	NA	NA	NA	NA	NA	NA	NA	56841305	56885758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ENSMUSG00000024590.9_56841406_56885868_1	chr18	+	1694	11	FSM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	521	628	521	-628	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTGAAAGTTTTGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	56841405	56885868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ENSMUSG00000024590.9_56861513_56885980_1	chr18	+	1625	10	ISM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	20628	516	20628	-516	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTTTTTGTATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	56861512	56885980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ENSMUSG00000024590.9_56861513_56886036_1	chr18	+	1681	10	ISM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	20628	460	20628	-460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAGGAGGGTAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	56861512	56886036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ENSMUSG00000024590.9_56864063_56886275_1	chr18	+	1656	8	ISM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	23178	221	23178	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCTAGTCACCATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	56864062	56886275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ENSMUSG00000024590.9_56864116_56886334_1	chr18	+	1662	8	ISM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	23231	162	23231	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTTCTCTTACATTGT	NA	NA	NA	NA	NA	NA	NA	NA	56864115	56886334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ENSMUSG00000024590.9_56866322_56886496_1	chr18	+	1689	7	ISM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	25437	0	25437	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTCTTTTTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	56866321	56886496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ENSMUSG00000024590.9_56866387_56886496_1	chr18	+	1624	7	ISM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	25502	0	25502	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTCTTTTTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	56866386	56886496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ENSMUSG00000024592.16_57090118_57106537_1	chr18	-	1133	4	ISM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	1903	1213	1889	568	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCGAATGAATTCTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	57106537	57090117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455
ENSMUSG00000024592.16_57090686_57106556_1	chr18	-	681	5	ISM	ENSMUSG00000024592.16	ENSMUST00000139243.9	726	6	1870	0	1870	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCGTGACCGTGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	57106556	57090685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_57090994_57091594_57091652_57095472_57095591_57100164_57100262_57106455
ENSMUSG00000024594.10_57487818_57523687_1	chr18	+	2684	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	5	2341	5	-2341	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTGTCCAGTCGACCA	NA	NA	NA	NA	NA	NA	NA	NA	57487817	57523687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ENSMUSG00000024594.10_57487962_57523727_1	chr18	+	2580	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	149	2301	149	-2301	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTTGACTGTCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	57487961	57523727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ENSMUSG00000024594.10_57495592_57523860_1	chr18	+	2624	8	ISM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	7779	2168	7779	-2168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGTCTGCCTTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	57495591	57523860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ENSMUSG00000024594.10_57496270_57524014_1	chr18	+	2626	7	ISM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	8457	2014	8457	-2014	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTCAAAATGTAGTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	57496269	57524014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ENSMUSG00000024594.10_57496321_57524093_1	chr18	+	2654	7	ISM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	8508	1935	8508	-1935	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGTGTAAATGTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	57496320	57524093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ENSMUSG00000024594.10_57498282_57524288_1	chr18	+	2611	6	ISM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	10469	1740	10469	-1740	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCACTGTGTGTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	57498281	57524288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ENSMUSG00000024594.10_57498338_57524354_1	chr18	+	2621	6	ISM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	10525	1674	10525	-1674	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGGCCCAGGGAAACGT	NA	NA	NA	NA	NA	NA	NA	NA	57498337	57524354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ENSMUSG00000024594.10_57504524_57524544_1	chr18	+	2642	5	ISM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	16711	1484	16711	-1484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTGCACACACACACACGC	NA	NA	NA	NA	NA	NA	NA	NA	57504523	57524544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ENSMUSG00000024594.10_57514787_57524796_1	chr18	+	2625	3	ISM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	26974	1232	26974	-1232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCGTCTTCCTCGAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	57514786	57524796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_57514804_57517245_57517349_57522291
ENSMUSG00000024598.10_58194481_58209766_1	chr18	-	1566	11	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	133235	0	133235	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCATCTTCTCCTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	58209766	58194480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58194836_58196578_58196702_58199065_58199189_58201337_58201464_58202199_58202326_58202478_58202602_58203019_58203146_58204864_58204991_58205625_58205755_58209051_58209178_58209683
ENSMUSG00000024598.10_58194619_58213247_1	chr18	-	1603	12	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	129754	138	129754	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTGCACGGCACATGTT	NA	NA	NA	NA	NA	NA	NA	NA	58213247	58194618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58194836_58196578_58196702_58199065_58199189_58201337_58201464_58202199_58202326_58202478_58202602_58203019_58203146_58204864_58204991_58205625_58205755_58209051_58209178_58209683_58209912_58213217
ENSMUSG00000024598.10_58194651_58213318_1	chr18	-	1642	12	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	129683	170	129683	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAAGGGGCTGGAACGGCC	NA	NA	NA	NA	NA	NA	NA	NA	58213318	58194650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58194836_58196578_58196702_58199065_58199189_58201337_58201464_58202199_58202326_58202478_58202602_58203019_58203146_58204864_58204991_58205625_58205755_58209051_58209178_58209683_58209912_58213217
ENSMUSG00000024598.10_58194807_58214456_1	chr18	-	1639	14	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	128545	326	128545	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGAGAACGGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	58214456	58194806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58194836_58196578_58196702_58199065_58199189_58201337_58201464_58202199_58202326_58202478_58202602_58203019_58203146_58204864_58204991_58205625_58205755_58209051_58209178_58209683_58209912_58213217_58213344_58213795_58213847_58214379
ENSMUSG00000024598.10_58196658_58217670_1	chr18	-	1614	14	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	125331	2177	125331	-2177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTGTGTCAACACCCC	NA	NA	NA	NA	NA	NA	NA	NA	58217670	58196657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58196702_58199065_58199189_58201337_58201464_58202199_58202326_58202478_58202602_58203019_58203146_58204864_58204991_58205625_58205755_58209051_58209178_58209683_58209912_58213217_58213344_58213795_58213847_58214379_58214518_58217648
ENSMUSG00000024598.10_58199156_58223645_1	chr18	-	1608	14	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	119356	4675	119356	-4675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGACATGCACGCCTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	58223645	58199155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58199189_58201337_58201464_58202199_58202326_58202478_58202602_58203019_58203146_58204864_58204991_58205625_58205755_58209051_58209178_58209683_58209912_58213217_58213344_58213795_58213847_58214379_58214518_58217648_58217769_58223615
ENSMUSG00000024598.10_58201434_58226404_1	chr18	-	1614	14	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	116597	6953	116597	-6953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATGTTTGGGGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	58226404	58201433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58201464_58202199_58202326_58202478_58202602_58203019_58203146_58204864_58204991_58205625_58205755_58209051_58209178_58209683_58209912_58213217_58213344_58213795_58213847_58214379_58214518_58217648_58217769_58223615_58223742_58226365
ENSMUSG00000024598.10_58202312_58228307_1	chr18	-	1613	14	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	114694	7831	114694	-7831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAACCCCGATATCTG	NA	NA	NA	NA	NA	NA	NA	NA	58228307	58202311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58202326_58202478_58202602_58203019_58203146_58204864_58204991_58205625_58205755_58209051_58209178_58209683_58209912_58213217_58213344_58213795_58213847_58214379_58214518_58217648_58217769_58223615_58223742_58226365_58226492_58228253
ENSMUSG00000024598.10_58202534_58229044_1	chr18	-	1607	14	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	113957	8053	113957	-8053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCAGCTGCAGCGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	58229044	58202533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58202602_58203019_58203146_58204864_58204991_58205625_58205755_58209051_58209178_58209683_58209912_58213217_58213344_58213795_58213847_58214379_58214518_58217648_58217769_58223615_58223742_58226365_58226492_58228253_58228308_58228981
ENSMUSG00000024598.10_58203128_58235524_1	chr18	-	1644	14	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	107477	8647	107477	-8647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCGACAACCTCTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	58235524	58203127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58203146_58204864_58204991_58205625_58205755_58209051_58209178_58209683_58209912_58213217_58213344_58213795_58213847_58214379_58214518_58217648_58217769_58223615_58223742_58226365_58226492_58228253_58228308_58228981_58229135_58235401
ENSMUSG00000024598.10_58204919_58237129_1	chr18	-	1651	14	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	105872	10438	105872	-10438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGACTGCCCACTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	58237129	58204918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58204991_58205625_58205755_58209051_58209178_58209683_58209912_58213217_58213344_58213795_58213847_58214379_58214518_58217648_58217769_58223615_58223742_58226365_58226492_58228253_58228308_58228981_58229135_58235401_58235525_58237050
ENSMUSG00000024598.10_58205704_58238231_1	chr18	-	1609	14	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	104770	11223	104770	-11223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACACGCCAGGCAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	58238231	58205703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58205755_58209051_58209178_58209683_58209912_58213217_58213344_58213795_58213847_58214379_58214518_58217648_58217769_58223615_58223742_58226365_58226492_58228253_58228308_58228981_58229135_58235401_58235525_58237050_58237174_58238167
ENSMUSG00000024598.10_58209066_58239380_1	chr18	-	1621	14	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	103621	14585	103621	-14585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACTGTACTGGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	58239380	58209065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58209178_58209683_58209912_58213217_58213344_58213795_58213847_58214379_58214518_58217648_58217769_58223615_58223742_58226365_58226492_58228253_58228308_58228981_58229135_58235401_58235525_58237050_58237174_58238167_58238294_58239365
ENSMUSG00000024598.10_58209126_58239426_1	chr18	-	1607	14	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	103575	14645	103575	-14645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAATTGGAAGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	58239426	58209125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58209178_58209683_58209912_58213217_58213344_58213795_58213847_58214379_58214518_58217648_58217769_58223615_58223742_58226365_58226492_58228253_58228308_58228981_58229135_58235401_58235525_58237050_58237174_58238167_58238294_58239365
ENSMUSG00000024598.10_58209732_58246371_1	chr18	-	1619	14	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	96630	15251	96630	-15251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGCTAACAGAGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	58246371	58209731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58209912_58213217_58213344_58213795_58213847_58214379_58214518_58217648_58217769_58223615_58223742_58226365_58226492_58228253_58228308_58228981_58229135_58235401_58235525_58237050_58237174_58238167_58238294_58239365_58239486_58246318
ENSMUSG00000024598.10_58209839_58247524_1	chr18	-	1673	15	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	95477	15358	95477	-15358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGACGCCTGCTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	58247524	58209838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58209912_58213217_58213344_58213795_58213847_58214379_58214518_58217648_58217769_58223615_58223742_58226365_58226492_58228253_58228308_58228981_58229135_58235401_58235525_58237050_58237174_58238167_58238294_58239365_58239486_58246318_58246457_58247448
ENSMUSG00000024598.10_58214380_58248802_1	chr18	-	1713	13	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	94199	19899	94199	-19899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAGCCTGACCAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	58248802	58214379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58214518_58217648_58217769_58223615_58223742_58226365_58226492_58228253_58228308_58228981_58229135_58235401_58235525_58237050_58237174_58238167_58238294_58239365_58239486_58246318_58246457_58247448_58247662_58248649
ENSMUSG00000024598.10_58217714_58257413_1	chr18	-	1636	13	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	85588	23233	85588	-23233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCTTTCCATTGCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	58257413	58217713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58217769_58223615_58223742_58226365_58226492_58228253_58228308_58228981_58229135_58235401_58235525_58237050_58237174_58238167_58238294_58239365_58239486_58246318_58246457_58247448_58247662_58248649_58248803_58257287
ENSMUSG00000024598.10_58223616_58282188_1	chr18	-	1707	13	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	60813	29135	60813	-29135	internal_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGACAGTGTTCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	58282188	58223615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58223742_58226365_58226492_58228253_58228308_58228981_58229135_58235401_58235525_58237050_58237174_58238167_58238294_58239365_58239486_58246318_58246457_58247448_58247662_58248649_58248803_58257287_58257414_58282062
ENSMUSG00000024598.10_58226412_58286903_1	chr18	-	1607	13	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	56098	31931	56098	-31931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAACAGTGGCTATGAACC	NA	NA	NA	NA	NA	NA	NA	NA	58286903	58226411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58226492_58228253_58228308_58228981_58229135_58235401_58235525_58237050_58237174_58238167_58238294_58239365_58239486_58246318_58246457_58247448_58247662_58248649_58248803_58257287_58257414_58282062_58282189_58286831
ENSMUSG00000024598.10_58228982_58323408_1	chr18	-	1695	12	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	19593	34501	19593	-34501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACTGCACATCGTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	58323408	58228981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58229135_58235401_58235525_58237050_58237174_58238167_58238294_58239365_58239486_58246318_58246457_58247448_58247662_58248649_58248803_58257287_58257414_58282062_58282189_58286831_58287030_58323312
ENSMUSG00000024598.10_58229086_58333777_1	chr18	-	1687	13	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	9224	34605	9224	-34605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCGTCCATTCCCGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	58333777	58229085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58229135_58235401_58235525_58237050_58237174_58238167_58238294_58239365_58239486_58246318_58246457_58247448_58247662_58248649_58248803_58257287_58257414_58282062_58282189_58286831_58287030_58323312_58323409_58333681
ENSMUSG00000024598.10_58235402_58341755_1	chr18	-	1722	13	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	1246	40921	1246	-40921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGAGGTCTTCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	58341755	58235401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58235525_58237050_58237174_58238167_58238294_58239365_58239486_58246318_58246457_58247448_58247662_58248649_58248803_58257287_58257414_58282062_58282189_58286831_58287030_58323312_58323409_58333681_58333778_58341671
ENSMUSG00000024598.10_58237052_58342648_1	chr18	-	1622	13	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	353	42571	353	-42571	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTATAGCTTTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	58342648	58237051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58237174_58238167_58238294_58239365_58239486_58246318_58246457_58247448_58247662_58248649_58248803_58257287_58257414_58282062_58282189_58286831_58287030_58323312_58323409_58333681_58333778_58341671_58341755_58342623
ENSMUSG00000024598.10_58237118_58342695_1	chr18	-	1603	13	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	306	42637	306	-42637	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCAGCTTCAAGTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	58342695	58237117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58237174_58238167_58238294_58239365_58239486_58246318_58246457_58247448_58247662_58248649_58248803_58257287_58257414_58282062_58282189_58286831_58287030_58323312_58323409_58333681_58333778_58341671_58341755_58342623
ENSMUSG00000024598.10_58237152_58342764_1	chr18	-	1638	13	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	237	42671	237	-42671	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACATGTGCTTGAATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	58342764	58237151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58237174_58238167_58238294_58239365_58239486_58246318_58246457_58247448_58247662_58248649_58248803_58257287_58257414_58282062_58282189_58286831_58287030_58323312_58323409_58333681_58333778_58341671_58341755_58342623
ENSMUSG00000024598.10_58238247_58342874_1	chr18	-	1647	12	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	127	43766	127	-43766	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGAACACAGATGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	58342874	58238246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58238294_58239365_58239486_58246318_58246457_58247448_58247662_58248649_58248803_58257287_58257414_58282062_58282189_58286831_58287030_58323312_58323409_58333681_58333778_58341671_58341755_58342623
ENSMUSG00000024598.10_58239366_58342998_1	chr18	-	1724	11	ISM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	3	44885	3	-44885	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACAGGGATTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	58342998	58239365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_58239486_58246318_58246457_58247448_58247662_58248649_58248803_58257287_58257414_58282062_58282189_58286831_58287030_58323312_58323409_58333681_58333778_58341671_58341755_58342623
ENSMUSG00000024600.9_58689650_58731763_1	chr18	+	998	5	ISM	ENSMUSG00000024600.9	ENST00000262462.9	1861	10	117	13664	117	-13664	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCATACTGGGAAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	58689649	58731763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_58690017_58705100_58705305_58712864_58713024_58715242_58715368_58731620
ENSMUSG00000024600.9_58689836_58740745_1	chr18	+	1005	7	ISM	ENSMUSG00000024600.9	ENSMUST00000025500.7	2485	10	507	5100	303	-4682	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTACGCTGGCTCGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	58689835	58740745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_58690017_58705100_58705305_58712864_58713024_58715242_58715368_58731620_58731816_58738109_58738201_58740695
ENSMUSG00000024600.9_58689889_58740793_1	chr18	+	1000	7	ISM	ENSMUSG00000024600.9	ENSMUST00000025500.7	2485	10	560	5052	356	-4634	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTCGGAAGGGAGACGT	NA	NA	NA	NA	NA	NA	NA	NA	58689888	58740793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_58690017_58705100_58705305_58712864_58713024_58715242_58715368_58731620_58731816_58738109_58738201_58740695
ENSMUSG00000024600.9_58689938_58740850_1	chr18	+	1008	7	ISM	ENSMUSG00000024600.9	ENSMUST00000025500.7	2485	10	609	4995	405	-4577	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAACTTCGTTTATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	58689937	58740850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_58690017_58705100_58705305_58712864_58713024_58715242_58715368_58731620_58731816_58738109_58738201_58740695
ENSMUSG00000024600.9_58705152_58742913_1	chr18	+	1068	8	ISM	ENSMUSG00000024600.9	ENSMUST00000025500.7	2485	10	15823	2932	15619	-2514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCTTTAGACTTAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	58705151	58742913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_58705305_58712864_58713024_58715242_58715368_58731620_58731816_58738109_58738201_58740695_58740895_58742241_58742340_58742865
ENSMUSG00000024600.9_58705232_58742940_1	chr18	+	1015	8	ISM	ENSMUSG00000024600.9	ENSMUST00000025500.7	2485	10	15903	2905	15699	-2487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTGGTGACATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58705231	58742940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_58705305_58712864_58713024_58715242_58715368_58731620_58731816_58738109_58738201_58740695_58740895_58742241_58742340_58742865
ENSMUSG00000024600.9_58705290_58742996_1	chr18	+	1013	8	ISM	ENSMUSG00000024600.9	ENSMUST00000025500.7	2485	10	15961	2849	15757	-2431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTTTACAACCTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	58705289	58742996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_58705305_58712864_58713024_58715242_58715368_58731620_58731816_58738109_58738201_58740695_58740895_58742241_58742340_58742865
ENSMUSG00000024600.9_58712943_58745331_1	chr18	+	1001	8	ISM	ENSMUSG00000024600.9	ENSMUST00000025500.7	2485	10	23614	514	23410	-96	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCGCTTTACTTTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	58712942	58745331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_58713024_58715242_58715368_58731620_58731816_58738109_58738201_58740695_58740895_58742241_58742340_58742865_58742997_58745250
ENSMUSG00000024600.9_58712994_58745386_1	chr18	+	1005	8	ISM	ENSMUSG00000024600.9	ENSMUST00000025500.7	2485	10	23665	459	23461	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTTATAATCAGATAATG	NA	NA	NA	NA	NA	NA	NA	NA	58712993	58745386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_58713024_58715242_58715368_58731620_58731816_58738109_58738201_58740695_58740895_58742241_58742340_58742865_58742997_58745250
ENSMUSG00000024601.10_58792538_58811942_1	chr18	+	1879	5	FSM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	0	1498	0	686	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTACTCAAACATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	58792537	58811942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810836
ENSMUSG00000024601.10_58804277_58812174_1	chr18	+	1782	4	ISM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	11739	1266	11725	918	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATAGCGTTCCTGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	58804276	58812174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_58804400_58804519_58804724_58806321_58806439_58810836
ENSMUSG00000024601.10_58804370_58812287_1	chr18	+	1802	4	ISM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	11832	1153	11818	1031	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTCTGGGCTGTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	58804369	58812287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_58804400_58804519_58804724_58806321_58806439_58810836
ENSMUSG00000024601.10_58804618_58812434_1	chr18	+	1821	3	ISM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	12080	1006	12066	-1006	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCACCACAAATGAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	58804617	58812434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_58804724_58806321_58806439_58810836
ENSMUSG00000024601.10_58806361_58812562_1	chr18	+	1804	2	ISM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	13823	878	13809	-878	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGCTAGTGTTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	58806360	58812562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_58806439_58810836
ENSMUSG00000024601.10_58806394_58812638_1	chr18	+	1847	2	ISM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	13856	802	13842	-802	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCGTTAAAAATAAAAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	58806393	58812638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_58806439_58810836
ENSMUSG00000024603.9_60659286_60677201_1	chr18	+	537	5	ISM	ENSMUSG00000024603.9	ENSMUST00000223984.2	2948	14	29	13810	0	-13810	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTGGCTTTTTCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	60659285	60677201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110
ENSMUSG00000024603.9_60659405_60678868_1	chr18	+	484	6	ISM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	132	12970	119	-12143	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGTACACTTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	60659404	60678868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819
ENSMUSG00000024603.9_60671334_60679405_1	chr18	+	520	5	ISM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	12061	12433	12048	-11606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATATCCTGTGTCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	60671333	60679405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292
ENSMUSG00000024603.9_60671502_60679915_1	chr18	+	429	6	ISM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	12229	11923	12216	-11096	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTCTGATCAAACGGTC	NA	NA	NA	NA	NA	NA	NA	NA	60671501	60679915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838
ENSMUSG00000024603.9_60674643_60683331_1	chr18	+	524	6	ISM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	15370	8507	15357	-7680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTATTTTAGGGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	60674642	60683331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257
ENSMUSG00000024603.9_60677198_60685954_1	chr18	+	485	7	ISM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	17925	5884	17912	-5057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTCACCCATGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	60677197	60685954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916
ENSMUSG00000024603.9_60679882_60689370_1	chr18	+	473	6	ISM	ENSMUSG00000024603.9	ENSMUST00000223984.2	2948	14	20625	1641	20596	-1641	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGACCGTGTGCTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	60679881	60689370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ENSMUSG00000024603.9_60679919_60689442_1	chr18	+	508	6	ISM	ENSMUSG00000024603.9	ENSMUST00000223984.2	2948	14	20662	1569	20633	-1569	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACCAAGGCACAGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	60679918	60689442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ENSMUSG00000024603.9_60685948_60689630_1	chr18	+	506	3	ISM	ENSMUSG00000024603.9	ENSMUST00000223984.2	2948	14	26691	1381	26662	-1381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCAGGGTTGGGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	60685947	60689630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_60686025_60688178_60688277_60689299
ENSMUSG00000024603.9_60685996_60689688_1	chr18	+	516	3	ISM	ENSMUSG00000024603.9	ENSMUST00000223984.2	2948	14	26739	1323	26710	-1323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACTTGCACATTGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	60685995	60689688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_60686025_60688178_60688277_60689299
ENSMUSG00000024604.8_60693840_60705403_1	chr18	+	1699	11	FSM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	32	479	32	-479	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTATGTCTATTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	60693839	60705403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
ENSMUSG00000024604.8_60693840_60705443_1	chr18	+	1739	11	FSM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	32	439	32	-439	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTTAGTACTAATC	NA	NA	NA	NA	NA	NA	NA	NA	60693839	60705443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
ENSMUSG00000024604.8_60697528_60705634_1	chr18	+	1641	8	ISM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	3720	248	3720	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATCCACATCACCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	60697527	60705634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
ENSMUSG00000024604.8_60698747_60705882_1	chr18	+	1792	7	ISM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	4939	0	4939	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTTAAGACTGGATTA	NA	NA	NA	NA	NA	NA	NA	NA	60698746	60705882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
ENSMUSG00000024608.12_60907668_60911618_1	chr18	+	590	5	NNC	ENSMUSG00000024608.12	novel	597	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11089	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	60907667	60911618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_60907759_60909472_60909624_60910001_60910164_60910891_60910962_60911502
ENSMUSG00000024613.17_60964897_60968870_1	chr18	-	1080	6	ISM	ENSMUSG00000024613.17	ENSMUST00000175934.8	4595	26	13131	18070	13131	-18070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTGAGTCTGAGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	60968870	60964896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726
ENSMUSG00000024614.8_90529405_90546084_1	chr18	+	526	7	FSM	ENSMUSG00000024614.8	ENST00000443099.6	531	7	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGTAAGTTCTAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	90529404	90546084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90541653_90541754_90542404_90542483_90545999
ENSMUSG00000024617.17_61080056_61085251_1	chr18	+	163	3	ISM	ENSMUSG00000024617.17	ENST00000672396.1	2409	18	21334	33506	-16570	8783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGAAGCTGATGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	61080055	61085251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_61080118_61084364_61084420_61085205
ENSMUSG00000024639.6_16110340_16361026_1	chr19	+	1698	7	FSM	ENSMUSG00000024639.6	ENSMUST00000025541.6	5644	7	145	3801	145	275	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTATAAAAGCACTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	16110339	16361026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_16110826_16196951_16197137_16293380_16293536_16309440_16309570_16312344_16312475_16355520_16355675_16360567
ENSMUSG00000024639.6_16312412_16360725_1	chr19	+	375	3	ISM	ENSMUSG00000024639.6	ENST00000444815.2	1077	7	201722	26	201722	-26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTGAACCTGAAGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	16312411	16360725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_16312475_16355520_16355675_16360567
ENSMUSG00000024640.10_15882787_15886805_1	chr19	-	1008	3	ISM	ENSMUSG00000024640.10	ENSMUST00000162053.8	2291	9	15181	296	15181	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTAAAGCTGCGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	15886805	15882786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_15883516_15884293_15884432_15886664
ENSMUSG00000024640.10_15883014_15892397_1	chr19	-	939	4	ISM	ENSMUSG00000024640.10	ENSMUST00000162053.8	2291	9	9589	523	9589	-523	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGTTGGTTCAAGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	15892397	15883013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227
ENSMUSG00000024640.10_15883154_15894557_1	chr19	-	916	5	ISM	ENSMUSG00000024640.10	ENSMUST00000162053.8	2291	9	7429	663	7429	-663	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCCTGTCAGCCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	15894557	15883153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440
ENSMUSG00000024640.10_15883437_15896859_1	chr19	-	936	7	ISM	ENSMUSG00000024640.10	ENSMUST00000162053.8	2291	9	5127	946	5127	-946	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTTGGAGATGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	15896859	15883436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818
ENSMUSG00000024640.10_15884292_15898360_1	chr19	-	949	7	ISM	ENSMUSG00000024640.10	ENSMUST00000162053.8	2291	9	3626	1801	3626	-1801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACACCTTGTCCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	15898360	15884291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299
ENSMUSG00000024640.10_15884292_15902294_1	chr19	-	1016	8	ISM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	129	2250	129	-1801	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACACCTTGTCCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	15902294	15884291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ENSMUSG00000024640.10_15886665_15902423_1	chr19	-	1005	7	ISM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	0	4623	0	-4174	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCAATGCGTTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	15902423	15886664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ENSMUSG00000024644.18_84685596_84687138_1	chr18	-	861	3	ISM	ENSMUSG00000024644.18	ENST00000324301.12	1116	8	12067	-562	12067	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAACTGCCGTGGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	84687138	84685595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_84686226_84686662_84686811_84687055
ENSMUSG00000024644.18_84686148_84693161_1	chr18	-	839	7	ISM	ENSMUSG00000024644.18	ENST00000324301.12	1116	8	6044	-10	6044	10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCCTCGGAGTGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	84693161	84686147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101
ENSMUSG00000024644.18_84686158_84688976_1	chr18	-	622	5	ISM	ENSMUSG00000024644.18	ENST00000324301.12	1116	8	10229	0	10229	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTCTCAGTTTCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	84688976	84686157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877
ENSMUSG00000024644.18_84686679_84693333_1	chr18	-	917	6	ISM	ENSMUSG00000024644.18	ENST00000324301.12	1116	8	5872	521	5872	-521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGAAGCTCAACAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	84693333	84686678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101
ENSMUSG00000024644.18_84687056_84696896_1	chr18	-	907	7	ISM	ENSMUSG00000024644.18	ENSMUST00000168419.3	2152	11	3288	1462	2309	-898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTACCCTTTGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	84696896	84687055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832
ENSMUSG00000024644.18_84687962_84699075_1	chr18	-	588	5	ISM	ENSMUSG00000024644.18	ENST00000324301.12	1116	8	130	1804	130	-1804	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCGTGCCAGACATGATAC	NA	NA	NA	NA	NA	NA	NA	NA	84699075	84687961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84699059
ENSMUSG00000024644.18_84687998_84699118_1	chr18	-	847	7	ISM	ENSMUSG00000024644.18	ENSMUST00000168419.3	2152	11	1066	2404	87	-1840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCCCAGAAAGGTGGTCG	NA	NA	NA	NA	NA	NA	NA	NA	84699118	84687997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059
ENSMUSG00000024644.18_84688040_84699114_1	chr18	-	549	5	ISM	ENSMUSG00000024644.18	ENST00000324301.12	1116	8	91	1882	91	-1882	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATCGAAGGGGCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	84699114	84688039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84699059
ENSMUSG00000024644.18_84688068_84699200_1	chr18	-	607	5	ISM	ENSMUSG00000024644.18	ENST00000324301.12	1116	8	5	1910	5	-1910	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCGATACCCGTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	84699200	84688067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84699059
ENSMUSG00000024644.18_84688931_84700007_1	chr18	-	835	7	ISM	ENSMUSG00000024644.18	ENSMUST00000168419.3	2152	11	177	3337	177	-2773	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGAGTTCGCCAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	84700007	84688930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962
ENSMUSG00000024645.6_84965415_84967339_1	chr18	-	657	4	ISM	ENSMUSG00000024645.6	ENSMUST00000025547.4	2418	6	2310	1099	2310	-1099	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGATGTTAAAAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	84967339	84965414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_84965871_84965958_84966065_84966147_84966222_84967318
ENSMUSG00000024645.6_84965663_84969233_1	chr18	-	655	6	FSM	ENSMUSG00000024645.6	ENSMUST00000025547.4	2418	6	416	1347	416	-1347	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGAAGTGCAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	84969233	84965662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_84965871_84965958_84966065_84966147_84966222_84967318_84967417_84967514_84967578_84969127
ENSMUSG00000024645.6_84965780_84969288_1	chr18	-	593	6	FSM	ENSMUSG00000024645.6	ENSMUST00000025547.4	2418	6	361	1464	361	-1464	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTAAAAGCCTCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	84969288	84965779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_84965871_84965958_84966065_84966147_84966222_84967318_84967417_84967514_84967578_84969127
ENSMUSG00000024645.6_84965823_84969353_1	chr18	-	615	6	FSM	ENSMUSG00000024645.6	ENSMUST00000025547.4	2418	6	296	1507	296	-1507	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCTACAAGATCTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	84969353	84965822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_84965871_84965958_84966065_84966147_84966222_84967318_84967417_84967514_84967578_84969127
ENSMUSG00000024645.6_84966046_84969501_1	chr18	-	628	5	ISM	ENSMUSG00000024645.6	ENSMUST00000025547.4	2418	6	148	1730	148	-1730	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGCTAAAGCGCATCCG	NA	NA	NA	NA	NA	NA	NA	NA	84969501	84966045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_84966065_84966147_84966222_84967318_84967417_84967514_84967578_84969127
ENSMUSG00000024645.6_84967317_84969632_1	chr18	-	668	3	ISM	ENSMUSG00000024645.6	ENSMUST00000025547.4	2418	6	17	3001	17	-3001	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTCTGATGATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	84969632	84967316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_84967417_84967514_84967578_84969127
ENSMUSG00000024646.15_84869539_84897996_1	chr18	+	730	3	NNC	ENSMUSG00000024646.15	novel	833	5	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTCTGTTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	84869538	84897996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_84869733_84889629_84889759_84897589
ENSMUSG00000024646.15_84869539_84897996_2	chr18	+	749	4	NIC	ENSMUSG00000024646.15	novel	833	5	NA	NA	-60	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTCTGTTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	84869538	84897996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr18_+_84869733_84889629_84889759_84891264_84891295_84897600
ENSMUSG00000024646.15_84869539_84897996_3	chr18	+	757	5	FSM	ENSMUSG00000024646.15	ENSMUST00000160180.9	833	5	76	0	-60	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTCTGTTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	84869538	84897996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_84869733_84889629_84889759_84891264_84891295_84895951_84895987_84897627
ENSMUSG00000024646.15_84869704_84895908_1	chr18	+	180	3	ISM	ENSMUSG00000024646.15	ENST00000494131.6	724	4	105	2080	105	-1755	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGACGGGACCCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	84869703	84895908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_84869733_84889629_84889759_84895886
ENSMUSG00000024646.15_84889624_84895986_1	chr18	+	235	2	ISM	ENSMUSG00000024646.15	ENST00000494131.6	724	4	20025	2002	19620	-1677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGCAGTGCTGTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	84889623	84895986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_84889759_84895886
ENSMUSG00000024646.15_84895887_84897717_1	chr18	+	190	2	ISM	ENSMUSG00000024646.15	ENSMUST00000163083.2	676	5	25883	270	25883	54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCGAAGCCGAAGAACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	84895886	84897717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_84895987_84897627
ENSMUSG00000024647.15_86729849_86734844_1	chr18	+	312	3	FSM	ENSMUSG00000024647.15	ENST00000584764.5	538	3	12	214	12	-214	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCATGGGAGGCTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	86729848	86734844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_86729902_86734400_86734521_86734705
ENSMUSG00000024650.6_8595403_8599273_1	chr19	+	1160	5	ISM	ENSMUSG00000024650.6	ENST00000360421.9	1956	10	13	4352	0	-4352	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGATTCGTTTGTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	8595402	8599273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8596011_8596366_8596471_8596678_8596834_8598554_8598724_8599149
ENSMUSG00000024650.6_8595651_8600901_1	chr19	+	1102	7	ISM	ENSMUSG00000024650.6	ENST00000360421.9	1956	10	261	2724	248	-2724	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGATTTTCGGCGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	8595650	8600901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8596011_8596366_8596471_8596678_8596834_8598554_8598724_8599149_8599274_8599405_8599522_8600827
ENSMUSG00000024650.6_8595842_8601200_1	chr19	+	1069	8	ISM	ENSMUSG00000024650.6	ENST00000360421.9	1956	10	452	2425	439	-2425	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCCTGGCTGTACTAGG	NA	NA	NA	NA	NA	NA	NA	NA	8595841	8601200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8596011_8596366_8596471_8596678_8596834_8598554_8598724_8599149_8599274_8599405_8599522_8600827_8601043_8601183
ENSMUSG00000024650.6_8595896_8601249_1	chr19	+	1064	8	ISM	ENSMUSG00000024650.6	ENST00000360421.9	1956	10	506	2376	493	-2376	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTTCCTGTACACCGGA	NA	NA	NA	NA	NA	NA	NA	NA	8595895	8601249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8596011_8596366_8596471_8596678_8596834_8598554_8598724_8599149_8599274_8599405_8599522_8600827_8601043_8601183
ENSMUSG00000024650.6_8596450_8603188_1	chr19	+	1101	8	ISM	ENSMUSG00000024650.6	ENST00000360421.9	1956	10	1060	437	1047	-437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAAGAGCAGGTAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	8596449	8603188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8596471_8596678_8596834_8598554_8598724_8599149_8599274_8599405_8599522_8600827_8601043_8601183_8601293_8602996
ENSMUSG00000024650.6_8596817_8603625_1	chr19	+	1089	8	NIC	ENSMUSG00000024650.6	novel	1956	10	NA	NA	1414	0	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCATCTATGAGGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	8596816	8603625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_+_8596834_8598554_8598724_8599149_8599274_8599405_8599522_8600827_8601043_8601183_8601293_8602996_8603201_8603490
ENSMUSG00000024654.9_9089408_9112215_1	chr19	-	1761	6	ISM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	785	2176	785	-2176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGAGTGTGGTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	9112215	9089407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150
ENSMUSG00000024659.16_20350794_20368308_1	chr19	-	1662	13	NNC	ENSMUSG00000024659.16	novel	1674	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	21531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTGTGTCATTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	20368308	20350793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_20351135_20352588_20352712_20354015_20354075_20354970_20355067_20355759_20355854_20357012_20357070_20357703_20357774_20359413_20359505_20360225_20360340_20361120_20361216_20361838_20361948_20362056_20362137_20367975
ENSMUSG00000024659.16_20350794_20368308_2	chr19	-	1665	13	NNC	ENSMUSG00000024659.16	novel	1674	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTGTGTCATTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	20368308	20350793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_20351135_20352588_20352712_20354015_20354075_20354970_20355067_20355759_20355854_20357012_20357070_20357703_20357784_20359413_20359505_20360225_20360340_20361120_20361216_20361845_20361948_20362056_20362137_20367975
ENSMUSG00000024659.16_20350794_20368308_3	chr19	-	1664	13	NNC	ENSMUSG00000024659.16	novel	1674	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	18703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTGTGTCATTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	20368308	20350793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_20351135_20352588_20352712_20354015_20354075_20354970_20355059_20355759_20355854_20357012_20357070_20357703_20357784_20359413_20359505_20360225_20360340_20361120_20361216_20361838_20361948_20362056_20362137_20367975
ENSMUSG00000024659.16_20350794_20368308_4	chr19	-	1667	13	NNC	ENSMUSG00000024659.16	novel	1674	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTGTGTCATTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	20368308	20350793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_20351135_20352588_20352712_20354015_20354070_20354970_20355067_20355759_20355854_20357012_20357070_20357703_20357784_20359413_20359505_20360225_20360340_20361120_20361216_20361838_20361948_20362056_20362137_20367975
ENSMUSG00000024660.10_9849688_9861284_1	chr19	-	1617	10	ISM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	15631	28	11540	-28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACTAGAGGCTTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	9861284	9849687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268
ENSMUSG00000024660.10_9849706_9861330_1	chr19	-	1645	10	ISM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	15585	46	11494	-46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTGTGGATATTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	9861330	9849705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268
ENSMUSG00000024660.10_9849940_9862907_1	chr19	-	1587	12	ISM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	14008	280	9917	101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTGCACTTCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	9862907	9849939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836
ENSMUSG00000024660.10_9850185_9870736_1	chr19	-	1596	15	ISM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	6179	525	2088	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAGCTCTTCGGATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	9870736	9850184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636
ENSMUSG00000024660.10_9851680_9870871_1	chr19	-	1582	14	ISM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	6044	2020	1953	-1639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAGCGTAGACGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	9870871	9851679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636
ENSMUSG00000024660.10_9853976_9871189_1	chr19	-	1636	11	ISM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	5726	4316	1635	-3935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCGTCTTCGGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	9871189	9853975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636
ENSMUSG00000024660.10_9854071_9871221_1	chr19	-	1573	11	ISM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	5694	4411	1603	-4030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCGAAGGGAGCAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	9871221	9854070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636
ENSMUSG00000024660.10_9855125_9872288_1	chr19	-	1617	11	ISM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	4627	5465	536	-5084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGCAACTGCCAAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	9872288	9855124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202
ENSMUSG00000024660.10_9855583_9872824_1	chr19	-	1658	11	ISM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	4091	5923	0	-5542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCCCGTGAGAGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	9872824	9855582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684
ENSMUSG00000024660.10_9861124_9876853_1	chr19	-	1619	10	ISM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	62	11464	62	-11083	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCAGCAGTGTCATGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	9876853	9861123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ENSMUSG00000024661.8_9958131_9960052_1	chr19	+	445	2	ISM	ENSMUSG00000024661.8	ENSMUST00000235196.2	1494	5	169	2404	169	-2055	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCTCCTGCGCCAGACG	NA	NA	NA	NA	NA	NA	NA	NA	9958130	9960052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_9958255_9959731
ENSMUSG00000024661.8_9960068_9962462_1	chr19	+	864	4	NNC	ENSMUSG00000024661.8	novel	929	4	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	34006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTGTGATTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	9960067	9962462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_9960348_9961544_9961692_9961930_9962050_9962144
ENSMUSG00000024661.8_9960111_9962179_1	chr19	+	545	4	FSM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	101	283	18	72	multi-exon	FALSE	canonical	NA	NA	NA	NA	3440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGGTGAAATCCATTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	9960110	9962179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_9960348_9961544_9961692_9961923_9962050_9962144
ENSMUSG00000024661.8_9960111_9962457_1	chr19	+	733	4	FSM	ENSMUSG00000024661.8	ENST00000526640.5	731	4	18	-20	18	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTTTCTTTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	9960110	9962457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_9960258_9961544_9961692_9961923_9962050_9962144
ENSMUSG00000024661.8_9960111_9962462_1	chr19	+	738	4	FSM	ENSMUSG00000024661.8	ENST00000526640.5	731	4	18	-25	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTGTGATTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	9960110	9962462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_9960258_9961544_9961692_9961923_9962050_9962144
ENSMUSG00000024661.8_9960111_9962462_2	chr19	+	828	4	FSM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	101	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTGTGATTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	9960110	9962462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_9960348_9961544_9961692_9961923_9962050_9962144
ENSMUSG00000024663.21_10003944_10012491_1	chr19	+	1460	8	ISM	ENSMUSG00000024663.21	ENSMUST00000117641.8	2004	9	8386	328	8386	-328	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCTTCCTCTCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	10003943	10012491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10004150_10004747_10004844_10004923_10005002_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
ENSMUSG00000024663.21_10004028_10012589_1	chr19	+	1474	8	ISM	ENSMUSG00000024663.21	ENSMUST00000117641.8	2004	9	8470	230	8470	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCTCAGGACGTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	10004027	10012589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10004150_10004747_10004844_10004923_10005002_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
ENSMUSG00000024663.21_9995629_10012302_1	chr19	+	1416	9	FSM	ENSMUSG00000024663.21	ENSMUST00000117641.8	2004	9	71	517	71	-517	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGCCCTGGGACACC	NA	NA	NA	NA	NA	NA	NA	NA	9995628	10012302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
ENSMUSG00000024664.6_10018933_10037367_1	chr19	+	3580	12	FSM	ENSMUSG00000024664.6	ENSMUST00000115995.4	3687	12	0	107	0	-107	multi-exon	TRUE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGACTGCAGCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	10018932	10037367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_10019321_10029565_10029677_10030199_10030398_10031383_10031486_10031590_10031714_10031969_10032031_10032470_10032548_10032960_10033059_10033354_10033452_10033580_10033661_10033788_10033915_10035248
ENSMUSG00000024664.6_10019096_10037475_2	chr19	+	3525	12	FSM	ENSMUSG00000024664.6	ENSMUST00000115995.4	3687	12	163	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCTGCCTTTAGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	10019095	10037475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_10019321_10029565_10029677_10030199_10030398_10031383_10031486_10031590_10031714_10031969_10032031_10032470_10032548_10032960_10033059_10033354_10033452_10033580_10033661_10033788_10033915_10035248
ENSMUSG00000024665.9_10040129_10079110_1	chr19	-	3143	12	NNC	ENSMUSG00000024665.9	novel	3150	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTGTAGTTCAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	10079110	10040128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_10041679_10042049_10042176_10042965_10043046_10043615_10043713_10043878_10043977_10047635_10047713_10047927_10047989_10059928_10060055_10066065_10066161_10066271_10066470_10069104_10069216_10078586
ENSMUSG00000024665.9_10040129_10079110_2	chr19	-	3144	12	NNC	ENSMUSG00000024665.9	novel	3150	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTGTAGTTCAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	10079110	10040128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_10041679_10042049_10042176_10042965_10043046_10043615_10043713_10043878_10043977_10047635_10047713_10047927_10047989_10059928_10060045_10066061_10066168_10066271_10066470_10069104_10069216_10078586
ENSMUSG00000024665.9_10066125_10160539_1	chr19	-	408	4	ISM	ENSMUSG00000024665.9	ENST00000522056.5	1362	12	94	24582	94	-24582	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATAAGAAATCCATATGG	NA	NA	NA	NA	NA	NA	NA	NA	10160539	10066124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_10066168_10066271_10066470_10069104_10069216_10160483
ENSMUSG00000024666.7_10547842_10554726_1	chr19	-	1584	5	NNC	ENSMUSG00000024666.7	novel	1590	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	10554726	10547841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_10548627_10548892_10548969_10552200_10552373_10552603_10552876_10554447
ENSMUSG00000024666.7_10547842_10554726_2	chr19	-	1584	5	NNC	ENSMUSG00000024666.7	novel	1590	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	10554726	10547841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_10548633_10548892_10548969_10552200_10552373_10552609_10552876_10554447
ENSMUSG00000024666.7_10547842_10554726_3	chr19	-	1584	5	NNC	ENSMUSG00000024666.7	novel	1590	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	10554726	10547841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_10548633_10548892_10548969_10552206_10552373_10552603_10552876_10554447
ENSMUSG00000024666.7_10548081_10554300_1	chr19	-	1139	5	FSM	ENSMUSG00000024666.7	ENSMUST00000236099.2	1529	5	151	239	151	-237	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAGCTCTGGAGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	10554300	10548080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554233
ENSMUSG00000024666.7_10548144_10554445_1	chr19	-	1221	5	FSM	ENSMUSG00000024666.7	ENSMUST00000236099.2	1529	5	6	302	6	-300	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTCCTTCTCTTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	10554445	10548143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554233
ENSMUSG00000024666.7_10548166_10554445_1	chr19	-	1199	5	FSM	ENSMUSG00000024666.7	ENSMUST00000236099.2	1529	5	6	324	6	-322	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTTGCCTCCTCAACC	NA	NA	NA	NA	NA	NA	NA	NA	10554445	10548165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554233
ENSMUSG00000024667.13_10528098_10532445_1	chr19	-	621	4	ISM	ENSMUSG00000024667.13	ENSMUST00000154383.2	927	5	670	184	670	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGTGTGGACCTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	10532445	10528097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_10528405_10529136_10529339_10531892_10531986_10532426
ENSMUSG00000024667.13_10528219_10533120_1	chr19	-	641	5	FSM	ENSMUSG00000024667.13	ENSMUST00000059582.9	999	5	-5	363	-5	-305	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCATCAGCAGGAGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	10533120	10528218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533062
ENSMUSG00000024668.9_10480318_10502456_1	chr19	-	538	4	FSM	ENSMUSG00000024668.9	ENSMUST00000025570.8	2981	4	23	2420	23	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTGGCACTGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	10502456	10480317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10502422
ENSMUSG00000024680.13_11594837_11600149_1	chr19	-	511	5	NNC	ENSMUSG00000024680.13	novel	636	6	NA	NA	858	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCAGGGGACCAGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	11600149	11594836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_11594929_11595775_11595879_11596217_11596374_11596980_11597038_11600046
ENSMUSG00000024680.13_11594837_11601007_1	chr19	-	594	6	NNC	ENSMUSG00000024680.13	novel	1010	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCAGGGGACCAGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	11601007	11594836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_11594936_11595779_11595879_11596217_11596369_11596976_11597038_11600046_11600147_11600923
ENSMUSG00000024680.13_11594837_11601007_2	chr19	-	595	6	FSM	ENSMUSG00000024680.13	ENST00000617306.1	636	6	12	29	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCAGGGGACCAGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	11601007	11594836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_11594936_11595779_11595879_11596217_11596374_11596980_11597038_11600046_11600147_11600923
ENSMUSG00000024680.13_11594837_11601007_3	chr19	-	588	6	NNC	ENSMUSG00000024680.13	novel	1010	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1027	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCAGGGGACCAGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	11601007	11594836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_11594929_11595779_11595879_11596217_11596374_11596980_11597038_11600046_11600147_11600923
ENSMUSG00000024683.7_11747755_11751764_1	chr19	+	602	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	0	560	0	-560	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAACCAAGTTGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	11747754	11751764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
ENSMUSG00000024683.7_11750239_11751891_1	chr19	+	529	2	ISM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	2484	433	2484	-433	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGCCACTGCCAACATGT	NA	NA	NA	NA	NA	NA	NA	NA	11750238	11751891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_11750388_11751511
ENSMUSG00000024683.7_11750275_11751959_1	chr19	+	561	2	ISM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	2520	365	2520	-365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACTGGGGCAAATTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	11750274	11751959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_11750388_11751511
ENSMUSG00000024683.7_11750325_11752012_1	chr19	+	564	2	ISM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	2570	312	2570	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCGCAGCCTCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	11750324	11752012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_11750388_11751511
ENSMUSG00000024691.14_12545599_12566508_1	chr19	+	3255	5	NNC	ENSMUSG00000024691.14	novel	3912	5	NA	NA	37	-616	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTGGAAATCATTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	12545598	12566508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_12546189_12550870_12550945_12554453_12554535_12561286_12561487_12564198
ENSMUSG00000024691.14_12545742_12567125_1	chr19	+	3508	4	FSM	ENSMUSG00000024691.14	ENSMUST00000151307.8	3687	4	180	-1	180	1	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTTCTTTAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	12545741	12567125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_12546192_12550894_12550945_12554453_12554535_12564198
ENSMUSG00000024691.14_12545968_12566850_1	chr19	+	3228	5	NNC	ENSMUSG00000024691.14	novel	3912	5	NA	NA	406	-274	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTCCCTTATCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	12545967	12566850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_12546189_12550870_12550945_12554453_12554535_12561286_12561487_12564198
ENSMUSG00000024696.10_12781328_12802336_1	chr19	+	569	4	ISM	ENSMUSG00000024696.10	ENST00000528489.1	1093	7	33	8372	33	-8372	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAAAGCCCCACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	12781327	12802336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_12781455_12796699_12796800_12801307_12801476_12802162
ENSMUSG00000024696.10_12781439_12802473_1	chr19	+	478	5	ISM	ENSMUSG00000024696.10	ENST00000528489.1	1093	7	144	8235	144	-8235	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACATGGCACCCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	12781438	12802473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_12781455_12796699_12796800_12801307_12801476_12802162_12802337_12802453
ENSMUSG00000024696.10_12796698_12802535_1	chr19	+	526	4	ISM	ENSMUSG00000024696.10	ENST00000528489.1	1093	7	15403	8173	15403	-8173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGAGGGCTACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	12796697	12802535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_12796800_12801307_12801476_12802162_12802337_12802453
ENSMUSG00000024696.10_12796782_12810018_1	chr19	+	489	5	ISM	ENSMUSG00000024696.10	ENST00000528489.1	1093	7	15487	690	15487	-690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTTCTCACCCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	12796781	12810018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_12796800_12801307_12801476_12802162_12802337_12802453_12802536_12809971
ENSMUSG00000024696.10_12801306_12810120_1	chr19	+	575	4	ISM	ENSMUSG00000024696.10	ENST00000528489.1	1093	7	20011	588	20011	-588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	890	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATGCTCAATTACCT	NA	NA	NA	NA	NA	NA	NA	NA	12801305	12810120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_12801476_12802162_12802337_12802453_12802536_12809971
ENSMUSG00000024696.10_12801434_12810496_1	chr19	+	495	5	ISM	ENSMUSG00000024696.10	ENST00000528489.1	1093	7	20139	212	20139	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCTTTCTGTGAACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	12801433	12810496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_12801476_12802162_12802337_12802453_12802536_12809971_12810121_12810448
ENSMUSG00000024696.10_12802239_12810606_1	chr19	+	487	4	ISM	ENSMUSG00000024696.10	ENST00000528489.1	1093	7	20944	102	20944	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	740	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCACTTCGTGTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	12802238	12810606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_12802337_12802453_12802536_12809971_12810121_12810448
ENSMUSG00000024696.10_12802454_12810708_1	chr19	+	491	3	ISM	ENSMUSG00000024696.10	ENST00000528489.1	1093	7	21159	0	21159	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	906	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACAGTAGTTCTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	12802453	12810708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_12802536_12809971_12810121_12810448
ENSMUSG00000024712.10_17371628_17376856_1	chr19	+	404	4	FSM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	221	1857	221	-1857	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGTGATATTGAAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	17371627	17376856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_17371757_17372561_17372714_17375941_17376045_17376836
ENSMUSG00000024712.10_17371705_17376894_1	chr19	+	365	4	FSM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	298	1819	298	-1819	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCGAACATTTGAAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	17371704	17376894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_17371757_17372561_17372714_17375941_17376045_17376836
ENSMUSG00000024725.14_18558499_18567798_1	chr19	-	459	5	ISM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	41355	1807	41219	-1807	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGAGGAGTCGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	18567798	18558498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764
ENSMUSG00000024725.14_18558643_18571255_1	chr19	-	479	7	ISM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	37898	1951	37762	-1951	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACTGATTCCCCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	18571255	18558642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219
ENSMUSG00000024725.14_18562016_18609082_1	chr19	-	644	9	ISM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	71	5324	-65	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAACAGGTATTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	18609082	18562015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
ENSMUSG00000024725.14_18562016_18609082_2	chr19	-	638	9	NNC	ENSMUSG00000024725.14	novel	579	9	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAACAGGTATTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	18609082	18562015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_18562108_18563910_18563984_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581571_18608977
ENSMUSG00000024725.14_18562016_18609082_3	chr19	-	644	9	FSM	ENSMUSG00000024725.14	ENST00000550242.1	579	9	-65	0	-65	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAACAGGTATTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	18609082	18562015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581571_18608977
ENSMUSG00000024725.14_18562016_18609082_4	chr19	-	637	9	NNC	ENSMUSG00000024725.14	novel	579	9	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAACAGGTATTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	18609082	18562015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_18562101_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581571_18608977
ENSMUSG00000024725.14_18562016_18609082_5	chr19	-	638	9	NNC	ENSMUSG00000024725.14	novel	579	9	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAACAGGTATTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	18609082	18562015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581565_18608977
ENSMUSG00000024725.14_18562016_18609082_7	chr19	-	638	9	NIC	ENSMUSG00000024725.14	novel	579	9	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAACAGGTATTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	18609082	18562015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_-_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581571_18608983
ENSMUSG00000024725.14_18562016_18609082_8	chr19	-	638	9	NNC	ENSMUSG00000024725.14	novel	579	9	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAACAGGTATTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	18609082	18562015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_18562108_18563910_18563990_18567068_18567113_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581571_18608977
ENSMUSG00000024732.8_10918845_10925794_1	chr19	-	2167	4	FSM	ENSMUSG00000024732.8	ENSMUST00000025639.7	3003	4	836	0	836	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCACCTTGCTCCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	10925794	10918844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641
ENSMUSG00000024734.9_10891651_10896431_1	chr19	-	1176	7	NNC	ENSMUSG00000024734.9	novel	1379	9	NA	NA	1417	-1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	299	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGATGTGAGGAAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	10896431	10891650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_10891714_10893798_10893988_10894081_10894210_10895000_10895099_10895260_10895449_10895832_10895977_10896065
ENSMUSG00000024734.9_10891651_10896431_2	chr19	-	1177	7	ISM	ENSMUSG00000024734.9	ENST00000278853.9	1379	9	1417	1	1417	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGATGTGAGGAAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	10896431	10891650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_10891714_10893797_10893988_10894081_10894210_10895000_10895099_10895260_10895449_10895832_10895977_10896065
ENSMUSG00000024734.9_10893798_10896865_1	chr19	-	1234	7	ISM	ENSMUSG00000024734.9	ENST00000278853.9	1379	9	983	2148	983	-2145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGATAGCAGAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	10896865	10893797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_10893988_10894081_10894210_10895000_10895099_10895260_10895449_10895832_10895977_10896065_10896430_10896743
ENSMUSG00000024734.9_10893901_10897824_1	chr19	-	1188	8	ISM	ENSMUSG00000024734.9	ENST00000278853.9	1379	9	24	2251	24	-2248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGAGAACTGATCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	10897824	10893900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_10893988_10894081_10894210_10895000_10895099_10895260_10895449_10895832_10895977_10896065_10896430_10896743_10896866_10897767
ENSMUSG00000024735.14_10879802_10880719_1	chr19	+	243	3	ISM	ENSMUSG00000024735.14	ENST00000584766.1	543	4	91	385	91	-385	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGTACTACCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	10879801	10880719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10879864_10880065_10880182_10880654
ENSMUSG00000024736.16_10835975_10837021_1	chr19	-	635	2	ISM	ENSMUSG00000024736.16	ENSMUST00000025645.14	3657	11	10283	789	10121	-777	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCATCCTCATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	10837021	10835974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_10836516_10836927
ENSMUSG00000024736.16_10836047_10837095_1	chr19	-	637	2	ISM	ENSMUSG00000024736.16	ENSMUST00000025645.14	3657	11	10209	861	10047	-849	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATGGTGCCTGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	10837095	10836046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_10836516_10836927
ENSMUSG00000024736.16_10836181_10837587_1	chr19	-	627	3	ISM	ENSMUSG00000024736.16	ENSMUST00000025645.14	3657	11	9717	995	9555	-983	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACGGTGGAGGGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	10837587	10836180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_10836516_10836927_10837120_10837487
ENSMUSG00000024736.16_10836286_10837694_1	chr19	-	629	3	ISM	ENSMUSG00000024736.16	ENSMUST00000025645.14	3657	11	9610	1100	9448	-1088	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCGTTCCCCTGGCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	10837694	10836285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_10836516_10836927_10837120_10837487
ENSMUSG00000024736.16_10837025_10840640_1	chr19	-	626	4	ISM	ENSMUSG00000024736.16	ENSMUST00000120524.2	3895	10	6502	1827	6502	-1827	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGCATCTCACTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	10840640	10837024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_10837120_10837487_10837762_10838893_10839097_10840586
ENSMUSG00000024736.16_10837538_10840890_1	chr19	-	633	4	ISM	ENSMUSG00000024736.16	ENSMUST00000120524.2	3895	10	6252	2340	6252	-2340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGGCCGCATCCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	10840890	10837537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_10837762_10838893_10839097_10840586_10840731_10840828
ENSMUSG00000024736.16_10843947_10847209_1	chr19	-	627	3	ISM	ENSMUSG00000024736.16	ENSMUST00000120524.2	3895	10	-67	8749	-67	-8749	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTCTTCCACCTCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	10847209	10843946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_10844052_10844293_10844509_10846902
ENSMUSG00000024737.3_10820405_10833411_1	chr19	+	1401	6	ISM	ENSMUSG00000024737.3	ENST00000681882.1	1708	7	26	1864	26	-1864	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACCGGATTCCCTCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	10820404	10833411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10820943_10825868_10826153_10830492_10830641_10831623_10831726_10832272_10832442_10833251
ENSMUSG00000024737.3_10820405_10835129_1	chr19	+	1367	6	FSM	ENSMUSG00000024737.3	ENST00000681951.1	1539	6	26	146	26	-146	multi-exon	FALSE	canonical	NA	NA	NA	NA	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGGGTCAGAGGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	10820404	10835129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_10820943_10825868_10826153_10830492_10830641_10831623_10831726_10833251_10833411_10834993
ENSMUSG00000024737.3_10820474_10833411_1	chr19	+	1329	6	NNC	ENSMUSG00000024737.3	novel	1708	7	NA	NA	95	-1864	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACCGGATTCCCTCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	10820473	10833411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_10820943_10825868_10826153_10830492_10830641_10831623_10831726_10832272_10832442_10833254
ENSMUSG00000024737.3_10820549_10835073_1	chr19	+	1336	7	FSM	ENSMUSG00000024737.3	ENST00000681882.1	1708	7	170	202	170	-202	multi-exon	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGCTGGTCGCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	10820548	10835073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_10820943_10825868_10826153_10830492_10830641_10831623_10831726_10832272_10832442_10833251_10833411_10834993
ENSMUSG00000024737.3_10820549_10835279_1	chr19	+	1372	6	NNC	ENSMUSG00000024737.3	novel	2345	8	NA	NA	170	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1042	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAGTCCATGACAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	10820548	10835279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_10820943_10825868_10826153_10830492_10830641_10831624_10831726_10833251_10833411_10834993
ENSMUSG00000024737.3_10820549_10835279_2	chr19	+	1373	6	FSM	ENSMUSG00000024737.3	ENST00000681951.1	1539	6	170	-4	170	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAGTCCATGACAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	10820548	10835279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_10820943_10825868_10826153_10830492_10830641_10831623_10831726_10833251_10833411_10834993
ENSMUSG00000024737.3_10820746_10835279_1	chr19	+	1344	7	NNC	ENSMUSG00000024737.3	novel	2345	8	NA	NA	367	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAGTCCATGACAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	10820745	10835279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_10820943_10825868_10826153_10830492_10830641_10831624_10831726_10832272_10832442_10833251_10833411_10834993
ENSMUSG00000024737.3_10820818_10835279_1	chr19	+	1273	7	FSM	ENSMUSG00000024737.3	ENST00000681882.1	1708	7	439	-4	439	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAGTCCATGACAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	10820817	10835279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_10820943_10825868_10826153_10830492_10830641_10831623_10831726_10832272_10832442_10833251_10833411_10834993
ENSMUSG00000024737.3_10820828_10835279_1	chr19	+	1262	7	NNC	ENSMUSG00000024737.3	novel	2345	8	NA	NA	449	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	892	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAGTCCATGACAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	10820827	10835279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_10820943_10825868_10826153_10830492_10830641_10831624_10831726_10832272_10832442_10833251_10833411_10834993
ENSMUSG00000024740.11_10582691_10600764_1	chr19	+	2510	17	ISM	ENSMUSG00000024740.11	ENSMUST00000025649.10	4459	27	0	6419	0	-5912	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCGCACAGTTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	10582690	10600764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702
ENSMUSG00000024740.11_10582951_10601002_1	chr19	+	2396	18	ISM	ENSMUSG00000024740.11	ENST00000681935.1	4113	27	23	6171	23	-5674	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGGACAGTGAGCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	10582950	10601002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890
ENSMUSG00000024740.11_10582951_10606676_1	chr19	+	3353	25	FSM	ENSMUSG00000024740.11	ENST00000680717.1	3912	25	53	506	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTATAACTAAAACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	10582950	10606676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_10583131_10584208_10584358_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000024740.11_10583074_10602579_1	chr19	+	2446	20	ISM	ENSMUSG00000024740.11	ENSMUST00000025649.10	4459	27	383	4604	87	-4097	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGCAAGTTGGGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	10583073	10602579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530
ENSMUSG00000024740.11_10583074_10606676_1	chr19	+	3230	25	FSM	ENSMUSG00000024740.11	ENST00000680717.1	3912	25	176	506	87	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTATAACTAAAACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	10583073	10606676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_10583131_10584208_10584358_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000024740.11_10583217_10592332_1	chr19	+	1133	9	ISM	ENSMUSG00000024740.11	ENST00000679588.1	4132	27	42	14850	42	-14344	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGGGAGTCCTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	10583216	10592332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10583289_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215
ENSMUSG00000024740.11_10584208_10602695_1	chr19	+	2506	19	ISM	ENSMUSG00000024740.11	ENST00000679588.1	4132	27	1033	4487	1033	-3981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGAACAGTCTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	10584207	10602695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530
ENSMUSG00000024740.11_10585241_10603997_1	chr19	+	2409	20	ISM	ENSMUSG00000024740.11	ENST00000679588.1	4132	27	2066	3185	2066	-2679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTGTAATCACTACAACAA	NA	NA	NA	NA	NA	NA	NA	NA	10585240	10603997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955
ENSMUSG00000024740.11_10585612_10604126_1	chr19	+	2508	19	ISM	ENSMUSG00000024740.11	ENST00000679588.1	4132	27	2437	3056	2437	-2550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGCCCGGGACTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	10585611	10604126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955
ENSMUSG00000024740.11_10585741_10599002_1	chr19	+	1055	10	ISM	ENSMUSG00000024740.11	ENST00000679588.1	4132	27	2566	8180	2566	-7674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGCAGCCAGGTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	10585740	10599002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904
ENSMUSG00000024740.11_10585769_10604547_1	chr19	+	2409	20	ISM	ENSMUSG00000024740.11	ENST00000679588.1	4132	27	2594	2635	2594	-2129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTGGGAGCTGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	10585768	10604547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489
ENSMUSG00000024740.11_10588067_10606863_1	chr19	+	3210	23	ISM	ENSMUSG00000024740.11	ENST00000679588.1	4132	27	4892	319	4892	187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATACCTCACACTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	10588066	10606863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000024740.11_10588104_10599303_1	chr19	+	1121	10	ISM	ENSMUSG00000024740.11	ENST00000679588.1	4132	27	4929	7879	4929	-7373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCATCCTTTGAACTA	NA	NA	NA	NA	NA	NA	NA	NA	10588103	10599303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184
ENSMUSG00000024740.11_10588112_10606920_1	chr19	+	3222	23	ISM	ENSMUSG00000024740.11	ENST00000679588.1	4132	27	4937	262	4937	244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTTGAGGTAGAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	10588111	10606920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000024740.11_10588158_10606979_1	chr19	+	3235	23	ISM	ENSMUSG00000024740.11	ENST00000679588.1	4132	27	4983	203	4983	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCTTCTCTTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	10588157	10606979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000024740.11_10590235_10607186_1	chr19	+	3323	21	ISM	ENSMUSG00000024740.11	ENST00000679588.1	4132	27	7060	-4	7060	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	10590234	10607186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000024740.11_10599276_10604027_1	chr19	+	1053	9	ISM	ENSMUSG00000024740.11	ENST00000679588.1	4132	27	16101	3155	16101	-2649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTACCTGAAGACCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	10599275	10604027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955
ENSMUSG00000024740.11_10599278_10604008_1	chr19	+	933	9	ISM	ENSMUSG00000024740.11	ENST00000681935.1	4113	27	16350	3165	16103	-2668	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAACAACATCATGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	10599277	10604008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602629_10602696_10603259_10603355_10603955
ENSMUSG00000024740.11_10599305_10604086_1	chr19	+	984	9	ISM	ENSMUSG00000024740.11	ENST00000681935.1	4113	27	16377	3087	16130	-2590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTTGCCTACAAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	10599304	10604086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602629_10602696_10603259_10603355_10603955
ENSMUSG00000024740.11_10599505_10604537_1	chr19	+	949	9	ISM	ENSMUSG00000024740.11	ENST00000681935.1	4113	27	16577	2636	16330	-2139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGACAATTTTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	10599504	10604537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602629_10602696_10603259_10603355_10603955_10604127_10604489
ENSMUSG00000024740.11_10599728_10604886_1	chr19	+	942	9	ISM	ENSMUSG00000024740.11	ENST00000681935.1	4113	27	16800	2287	16553	-1790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGGTTGGTCTCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	10599727	10604886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602629_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852
ENSMUSG00000024740.11_10599775_10604943_1	chr19	+	952	9	ISM	ENSMUSG00000024740.11	ENST00000681935.1	4113	27	16847	2230	16600	-1733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTATGCAGAATCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	10599774	10604943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602629_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852
ENSMUSG00000024740.11_10599836_10604984_1	chr19	+	932	9	ISM	ENSMUSG00000024740.11	ENST00000681935.1	4113	27	16908	2189	16661	-1692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTCGGTGCTCTTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	10599835	10604984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602629_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852
ENSMUSG00000024740.11_10600719_10605169_1	chr19	+	972	9	ISM	ENSMUSG00000024740.11	ENST00000681935.1	4113	27	17791	2004	17544	-1507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATGCAGAACCGACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	10600718	10605169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10600799_10600890_10601003_10602087_10602212_10602629_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125
ENSMUSG00000024740.11_10600960_10605836_1	chr19	+	930	9	ISM	ENSMUSG00000024740.11	ENST00000681935.1	4113	27	18032	1337	17785	-840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGATGGTGATCTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	10600959	10605836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10601003_10602087_10602212_10602629_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788
ENSMUSG00000024740.11_10602158_10606476_1	chr19	+	927	9	ISM	ENSMUSG00000024740.11	ENST00000681935.1	4113	27	19230	697	18983	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCAGATGACCTCATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	10602157	10606476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10602212_10602629_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000024740.11_10603967_10606800_1	chr19	+	1025	6	ISM	ENSMUSG00000024740.11	ENSMUST00000237337.2	1589	11	20980	-124	20792	124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCCTCCTGGGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	10603966	10606800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000024740.11_10604502_10606934_1	chr19	+	987	5	ISM	ENSMUSG00000024740.11	ENST00000679588.1	4132	27	21327	248	21327	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAGAGGGTCGAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	10604501	10606934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000024740.11_10604557_10607019_1	chr19	+	1017	5	ISM	ENSMUSG00000024740.11	ENST00000679588.1	4132	27	21382	163	21382	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCAGGCTACGGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	10604556	10607019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000024740.11_10604850_10607186_1	chr19	+	1144	4	ISM	ENSMUSG00000024740.11	ENST00000679588.1	4132	27	21675	-4	21675	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	10604849	10607186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000024742.16_10176502_10181258_1	chr19	-	2167	2	FSM	ENSMUSG00000024742.16	ENSMUST00000025651.6	2341	2	174	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	10181258	10176501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_10178462_10181051
ENSMUSG00000024742.16_10176684_10181533_1	chr19	-	2185	3	FSM	ENSMUSG00000024742.16	ENSMUST00000156291.2	2373	3	0	188	0	-178	multi-exon	FALSE	canonical	NA	NA	NA	NA	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGACCCCAGGGCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	10181533	10176683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_10178462_10181051_10181384_10181458
ENSMUSG00000024750.12_21249934_21253852_1	chr19	+	236	2	ISM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	292	10352	292	-5802	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTTATGGGAATCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	21249933	21253852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_21250107_21253789
ENSMUSG00000024754.14_21801230_21807226_1	chr19	+	309	4	ISM	ENSMUSG00000024754.14	ENST00000377066.9	4616	22	31230	27128	31230	-27128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAGTATGTGCCAACTC	NA	NA	NA	NA	NA	NA	NA	NA	21801229	21807226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_21801284_21802453_21802490_21803403_21803560_21807163
ENSMUSG00000024757.8_7659291_7688450_1	chr19	-	324	2	FSM	ENSMUSG00000024757.8	ENST00000417740.5	324	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCAATTTCTTCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	7688450	7659290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_7659321_7688156
ENSMUSG00000024758.16_7404386_7407131_1	chr19	-	871	2	ISM	ENSMUSG00000024758.16	ENST00000354497.4	1368	4	53380	38	53380	-38	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCTGTAACTGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	7407131	7404385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7405241_7407115
ENSMUSG00000024758.16_7404513_7412334_1	chr19	-	826	3	ISM	ENSMUSG00000024758.16	ENST00000354497.4	1368	4	48177	165	48177	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTACAGCCCTTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	7412334	7404512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7405241_7407115_7407175_7412295
ENSMUSG00000024758.16_7404562_7412389_1	chr19	-	832	3	ISM	ENSMUSG00000024758.16	ENST00000354497.4	1368	4	48122	214	48122	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGCGGCTGCTCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	7412389	7404561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7405241_7407115_7407175_7412295
ENSMUSG00000024758.16_7404623_7412493_1	chr19	-	875	3	ISM	ENSMUSG00000024758.16	ENST00000354497.4	1368	4	48018	275	48018	-275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGAAATGGGGGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	7412493	7404622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7405241_7407115_7407175_7412295
ENSMUSG00000024758.16_7404748_7460375_1	chr19	-	832	4	FSM	ENSMUSG00000024758.16	ENST00000354497.4	1368	4	136	400	136	160	multi-exon	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTATGGCCCTCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	7460375	7404747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_7405241_7407115_7407175_7412295_7412504_7460303
ENSMUSG00000024758.16_7404791_7460435_1	chr19	-	849	4	FSM	ENSMUSG00000024758.16	ENST00000354497.4	1368	4	76	443	76	117	multi-exon	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATAAATAGTATGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	7460435	7404790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_7405241_7407115_7407175_7412295_7412504_7460303
ENSMUSG00000024758.16_7404908_7460567_1	chr19	-	864	4	FSM	ENSMUSG00000024758.16	ENST00000354497.4	1368	4	-56	560	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAGGAGAAAAAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	7460567	7404907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_7405241_7407115_7407175_7412295_7412504_7460303
ENSMUSG00000024758.16_7405199_7409373_1	chr19	-	191	4	ISM	ENSMUSG00000024758.16	ENSMUST00000235593.2	2403	9	51259	291	51138	-291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGCACGTGAAGCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	7409373	7405198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7405241_7407115_7407175_7408350_7408398_7409330
ENSMUSG00000024764.11_7204928_7207382_1	chr19	-	761	4	ISM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	11166	1890	11039	-1850	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGTTTGTAAAAGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	7207382	7204927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312
ENSMUSG00000024764.11_7205097_7207622_1	chr19	-	751	5	ISM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	10926	2059	10799	-2019	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCCGTGAGATTGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	7207622	7205096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552
ENSMUSG00000024764.11_7205366_7218419_1	chr19	-	774	8	FSM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	129	2328	2	-2288	multi-exon	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTCAGCACTCCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	7218419	7205365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
ENSMUSG00000024767.12_7176480_7183599_1	chr19	-	823	7	FSM	ENSMUSG00000024767.12	ENSMUST00000123594.8	1728	7	0	905	0	-905	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCGAGGGCTCCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	7183599	7176479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183461
ENSMUSG00000024772.10_6326955_6344432_1	chr19	+	741	3	ISM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	200	5694	200	-5694	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATACGGGGCCCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	6326954	6344432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6327409_6331247_6331346_6344243
ENSMUSG00000024772.10_6327199_6347585_1	chr19	+	744	4	ISM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	444	2541	444	-2541	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAAGAAGGAGATGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	6327198	6347585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562
ENSMUSG00000024772.10_6327246_6347639_1	chr19	+	751	4	ISM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	491	2487	491	-2487	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAACAACCTGGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	6327245	6347639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562
ENSMUSG00000024772.10_6327381_6348143_1	chr19	+	744	5	FSM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	626	1983	626	-1983	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCCCAAGCTGCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	6327380	6348143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103
ENSMUSG00000024772.10_6331330_6348259_1	chr19	+	750	4	ISM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	4575	1867	4575	-1867	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTGATGGCACCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	6331329	6348259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6331346_6344243_6344657_6347562_6347728_6348103
ENSMUSG00000024772.10_6347573_6348657_1	chr19	+	709	2	ISM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	20818	1469	20818	-1469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCTGCTGCCACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	6347572	6348657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6347728_6348103
ENSMUSG00000024772.10_6347595_6348738_1	chr19	+	768	2	ISM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	20840	1388	20840	-1388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGGGTCACCATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	6347594	6348738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6347728_6348103
ENSMUSG00000024772.10_6347664_6348777_1	chr19	+	738	2	ISM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	20909	1349	20909	-1349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGTTTCCTCAGCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	6347663	6348777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6347728_6348103
ENSMUSG00000024773.16_6291863_6311712_1	chr19	+	809	6	FSM	ENSMUSG00000024773.16	ENST00000421419.3	1508	6	113	586	113	-586	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGATCCGACAGCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	6291862	6311712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6291997_6294456_6294620_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ENSMUSG00000024773.16_6291902_6311774_1	chr19	+	832	6	FSM	ENSMUSG00000024773.16	ENST00000421419.3	1508	6	152	524	152	-524	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAACGTGCTAGGGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	6291901	6311774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6291997_6294456_6294620_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ENSMUSG00000024773.16_6294539_6311931_1	chr19	+	812	5	ISM	ENSMUSG00000024773.16	ENST00000421419.3	1508	6	2789	367	2789	-367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACCAGCTCCCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	6294538	6311931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6294620_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ENSMUSG00000024773.16_6308892_6312057_1	chr19	+	859	4	ISM	ENSMUSG00000024773.16	ENST00000421419.3	1508	6	17142	241	17142	-241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCGGCTTTGGGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	6308891	6312057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6309016_6310018_6310174_6311401_6311555_6311630
ENSMUSG00000024773.16_6311399_6312325_1	chr19	+	851	2	ISM	ENSMUSG00000024773.16	ENST00000421419.3	1508	6	19649	-27	19649	27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCCACGTCCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	6311398	6312325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6311555_6311630
ENSMUSG00000024776.19_34169629_34211457_1	chr19	+	934	6	ISM	ENSMUSG00000024776.19	ENSMUST00000239240.2	1988	11	0	6276	0	-6274	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGAACAGTTCCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	34169628	34211457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_34169996_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360
ENSMUSG00000024776.19_34169892_34211699_1	chr19	+	913	6	ISM	ENSMUSG00000024776.19	ENSMUST00000239240.2	1988	11	263	6034	263	-6032	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGAGTGCTGTTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	34169891	34211699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_34169996_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360
ENSMUSG00000024777.11_6277795_6284828_1	chr19	-	2080	13	ISM	ENSMUSG00000024777.11	ENST00000164133.7	2710	14	1045	0	1045	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCTTGCTTTATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	6284828	6277794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662
ENSMUSG00000024777.11_6277942_6284898_1	chr19	-	2003	13	ISM	ENSMUSG00000024777.11	ENST00000164133.7	2710	14	975	147	975	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTTTTATTTATTGGG	NA	NA	NA	NA	NA	NA	NA	NA	6284898	6277941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662
ENSMUSG00000024777.11_6278142_6285071_1	chr19	-	1976	13	ISM	ENSMUSG00000024777.11	ENST00000164133.7	2710	14	802	347	802	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCTACACAGCCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	6285071	6278141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662
ENSMUSG00000024777.11_6278529_6285873_1	chr19	-	1979	14	FSM	ENSMUSG00000024777.11	ENSMUST00000025695.10	2742	14	29	734	0	-734	multi-exon	TRUE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCGAGGCTTGGAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	6285873	6278528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285130_6285541
ENSMUSG00000024780.8_28972565_28985576_1	chr19	+	969	4	ISM	ENSMUSG00000024780.8	ENSMUST00000224599.2	1769	5	4680	491	4665	-491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAGTGCCACTCCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	28972564	28985576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_28972723_28976660_28976752_28984371_28984488_28984972
ENSMUSG00000024781.17_34470770_34478947_1	chr19	-	1033	4	ISM	ENSMUSG00000024781.17	ENSMUST00000178114.2	2965	10	25927	1052	25927	-1052	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCTTCTGCAGTAGACC	NA	NA	NA	NA	NA	NA	NA	NA	34478947	34470769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902
ENSMUSG00000024781.17_34470899_34484458_1	chr19	-	1056	5	ISM	ENSMUSG00000024781.17	ENSMUST00000178114.2	2965	10	20416	1181	20416	-1181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCCCCTCACCAATGC	NA	NA	NA	NA	NA	NA	NA	NA	34484458	34470898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408
ENSMUSG00000024781.17_34470977_34484506_1	chr19	-	1026	5	ISM	ENSMUSG00000024781.17	ENSMUST00000178114.2	2965	10	20368	1259	20368	-1259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTCTTGCTGAACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	34484506	34470976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408
ENSMUSG00000024781.17_34471094_34486472_1	chr19	-	1032	6	ISM	ENSMUSG00000024781.17	ENSMUST00000178114.2	2965	10	18402	1376	18402	-1376	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGTGCATATATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	34486472	34471093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408_34484546_34486388
ENSMUSG00000024781.17_34471275_34488421_1	chr19	-	1076	7	ISM	ENSMUSG00000024781.17	ENSMUST00000178114.2	2965	10	16453	1557	16453	-1557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTTATGTGCAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	34488421	34471274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408_34484546_34486388_34486499_34488222
ENSMUSG00000024781.17_34471446_34502247_1	chr19	-	1133	9	ISM	ENSMUSG00000024781.17	ENSMUST00000178114.2	2965	10	2627	1728	2627	-1728	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTTTGGATGCCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	34502247	34471445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408_34484546_34486388_34486499_34488222_34488422_34500821_34500940_34502137
ENSMUSG00000024782.8_28999282_29003689_1	chr19	-	1143	2	ISM	ENSMUSG00000024782.8	ENST00000447596.4	638	4	21614	-944	21614	944	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGTAAGGGAGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	29003689	28999281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_29000347_29003611
ENSMUSG00000024782.8_28999533_29015295_1	chr19	-	1130	4	ISM	ENSMUSG00000024782.8	ENSMUST00000025696.5	2809	5	10066	1300	10008	693	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCCGTGTCACTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	29015295	28999532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_29000347_29003611_29003731_29004570_29004744_29015271
ENSMUSG00000024782.8_28999590_29015345_1	chr19	-	1123	4	ISM	ENSMUSG00000024782.8	ENSMUST00000025696.5	2809	5	10016	1357	9958	636	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGACTGAAGTTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	29015345	28999589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_29000347_29003611_29003731_29004570_29004744_29015271
ENSMUSG00000024782.8_28999706_29025157_1	chr19	-	1132	5	FSM	ENSMUSG00000024782.8	ENSMUST00000025696.5	2809	5	204	1473	146	520	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGGGAACAGGCCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	29025157	28999705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_29000347_29003611_29003731_29004570_29004744_29015271_29015392_29025078
ENSMUSG00000024782.8_28999765_29025206_1	chr19	-	1122	5	FSM	ENSMUSG00000024782.8	ENSMUST00000025696.5	2809	5	155	1532	97	461	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGCAACAGGCTTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	29025206	28999764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_29000347_29003611_29003731_29004570_29004744_29015271_29015392_29025078
ENSMUSG00000024782.8_28999826_29025361_1	chr19	-	1216	5	FSM	ENSMUSG00000024782.8	ENSMUST00000025696.5	2809	5	0	1593	0	400	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTTTTCTGGCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	29025361	28999825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_29000347_29003611_29003731_29004570_29004744_29015271_29015392_29025078
ENSMUSG00000024782.8_29000279_29025161_1	chr19	-	443	4	FSM	ENSMUSG00000024782.8	ENST00000447596.4	638	4	142	53	142	-53	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTACAGACGAAAGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	29025161	29000278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_29000347_29003611_29003731_29004570_29004744_29025078
ENSMUSG00000024785.8_29078922_29121329_1	chr19	+	1737	9	FSM	ENSMUSG00000024785.8	ENSMUST00000235900.2	1884	9	147	0	36	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATCTGGGATTTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	29078921	29121329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120546
ENSMUSG00000024785.8_29078937_29108116_1	chr19	+	745	7	ISM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	162	13127	51	-12577	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCAATCCCCAGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	29078936	29108116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049
ENSMUSG00000024785.8_29078992_29108163_1	chr19	+	737	7	ISM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	217	13080	106	-12530	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCAGGAACTGTGCAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	29078991	29108163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049
ENSMUSG00000024785.8_29078995_29098688_1	chr19	+	137	3	ISM	ENSMUSG00000024785.8	ENST00000442869.5	966	8	109	22005	109	-22005	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGCTCCCTCTACTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	29078994	29098688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29079041_29093122_29093195_29098669
ENSMUSG00000024785.8_29093121_29111841_1	chr19	+	775	7	ISM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	14346	9402	14235	-8852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGACCCTTGGACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	29093120	29111841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799
ENSMUSG00000024785.8_29093162_29099194_1	chr19	+	137	3	ISM	ENSMUSG00000024785.8	ENST00000442869.5	966	8	14276	21499	14276	-21499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGGCGAAGTGCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	29093161	29099194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29093195_29098669_29098745_29099165
ENSMUSG00000024785.8_29095623_29120610_1	chr19	+	834	7	ISM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	16848	633	16737	-83	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAACTGAAGGGCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	29095622	29120610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
ENSMUSG00000024785.8_29105399_29120851_1	chr19	+	697	4	ISM	ENSMUSG00000024785.8	ENST00000442869.5	966	8	26513	-158	26513	158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCACGTGACTTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	29105398	29120851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29105525_29108049_29108207_29111799_29111904_29120541
ENSMUSG00000024785.8_29105442_29120920_1	chr19	+	723	4	ISM	ENSMUSG00000024785.8	ENST00000442869.5	966	8	26556	-227	26556	227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGAGGAGGGGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	29105441	29120920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29105525_29108049_29108207_29111799_29111904_29120541
ENSMUSG00000024785.8_29105489_29120986_1	chr19	+	742	4	ISM	ENSMUSG00000024785.8	ENST00000442869.5	966	8	26603	-293	26603	-257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGATTGTGGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	29105488	29120986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29105525_29108049_29108207_29111799_29111904_29120541
ENSMUSG00000024785.8_29108125_29121141_1	chr19	+	786	3	ISM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	29350	102	29239	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTTTGTGTGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	29108124	29121141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29108207_29111799_29111904_29120541
ENSMUSG00000024785.8_29111795_29121243_1	chr19	+	811	2	ISM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	33020	0	32909	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGCACTGTAGTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	29111794	29121243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_29111904_29120541
ENSMUSG00000024787.15_6169882_6170774_1	chr19	-	362	2	ISM	ENSMUSG00000024787.15	ENSMUST00000025702.14	1635	8	7560	453	7403	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGGATGTCAGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	6170774	6169881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6169985_6170515
ENSMUSG00000024787.15_6170513_6171555_1	chr19	-	408	2	ISM	ENSMUSG00000024787.15	ENSMUST00000025702.14	1635	8	6779	1084	6622	-631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGGGCAGTAGGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	6171555	6170512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6170774_6171408
ENSMUSG00000024787.15_6170711_6172116_1	chr19	-	402	4	ISM	ENSMUSG00000024787.15	ENSMUST00000025702.14	1635	8	6218	1282	6061	-829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGACCAGGAACCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	6172116	6170710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6170774_6171408_6171553_6171812_6171961_6172069
ENSMUSG00000024787.15_6171522_6173983_1	chr19	-	419	4	ISM	ENSMUSG00000024787.15	ENSMUST00000154601.8	767	7	4194	1640	4194	-1640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTGGACCTTCTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	6173983	6171521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6171553_6171812_6171961_6172069_6172186_6173859
ENSMUSG00000024787.15_6171813_6174223_1	chr19	-	426	4	ISM	ENSMUSG00000024787.15	ENSMUST00000154601.8	767	7	3954	1931	3954	-1931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTCAGGGTCAGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	6174223	6171812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6171961_6172069_6172186_6173859_6173981_6174182
ENSMUSG00000024787.15_6171935_6178163_1	chr19	-	384	5	ISM	ENSMUSG00000024787.15	ENSMUST00000154601.8	767	7	14	2053	14	-2053	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCCAGGGACCTGCGAA	NA	NA	NA	NA	NA	NA	NA	NA	6178163	6171934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6171961_6172069_6172186_6173859_6173981_6174182_6174219_6178078
ENSMUSG00000024787.15_6173859_6178334_1	chr19	-	414	3	ISM	ENSMUSG00000024787.15	ENSMUST00000154601.8	767	7	-157	3977	0	-3977	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATTGACTCTGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	6178334	6173858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6173981_6174182_6174219_6178078
ENSMUSG00000024790.9_6166030_6168154_1	chr19	-	916	2	FSM	ENSMUSG00000024790.9	ENSMUST00000113533.3	1442	2	526	0	288	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACAGGAACTTTTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	6168154	6166029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6166618_6167826
ENSMUSG00000024790.9_6166320_6168550_1	chr19	-	1022	2	FSM	ENSMUSG00000024790.9	ENSMUST00000113533.3	1442	2	130	290	-108	-273	multi-exon	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTGTGCCAGGCCCATG	NA	NA	NA	NA	NA	NA	NA	NA	6168550	6166319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6166618_6167826
ENSMUSG00000024790.9_6166586_6167972_1	chr19	-	225	2	FSM	ENSMUSG00000024790.9	ENST00000398846.6	1234	2	470	539	470	-539	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGCTGCCCTGCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	6167972	6166585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6166618_6167779
ENSMUSG00000024792.10_6130795_6134934_1	chr19	-	1295	8	NNC	ENSMUSG00000024792.10	novel	1357	8	NA	NA	39	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTCTGAAGCAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	6134934	6130794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_6131245_6131876_6131988_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134079_6134381_6134492_6134824
ENSMUSG00000024793.15_152201071_152204418_3	chr4	+	1327	7	NNC	ENSMUSG00000024793.15	novel	1335	7	NA	NA	6	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGCTGCCTCACTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	152201070	152204418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_152201181_152201387_152201523_152201834_152202017_152202096_152202152_152202684_152202808_152203529_152203801_152203967
ENSMUSG00000024793.15_152201071_152204418_5	chr4	+	1329	7	FSM	ENSMUSG00000024793.15	ENST00000377782.7	1335	7	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGCTGCCTCACTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	152201070	152204418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_152201181_152201387_152201523_152201834_152202017_152202096_152202152_152202682_152202808_152203529_152203801_152203967
ENSMUSG00000024797.15_6118020_6120782_1	chr19	-	1345	6	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	6479	148	6448	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTTGCCTGCAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	6120782	6118019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468
ENSMUSG00000024797.15_6118247_6120936_1	chr19	-	1272	6	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	6325	375	6294	-375	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCTGCTGGACGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	6120936	6118246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468
ENSMUSG00000024797.15_6118898_6121150_1	chr19	-	1314	5	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	6111	1026	6080	-1026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATTCAACAAGGTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	6121150	6118897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468
ENSMUSG00000024797.15_6118961_6121329_1	chr19	-	1404	5	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	5901	-1089	intron_retention	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAACCTCCTGAGCAATA	NA	NA	NA	NA	NA	NA	NA	NA	6121329	6118960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_-_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295
ENSMUSG00000024797.15_6119108_6121390_1	chr19	-	1318	5	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	5871	1236	5840	-1236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGCAGCTCCCGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	6121390	6119107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295
ENSMUSG00000024797.15_6119164_6121456_1	chr19	-	1328	5	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	5805	1292	5774	-1292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGGGTGTCCGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	6121456	6119163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295
ENSMUSG00000024797.15_6119585_6121625_1	chr19	-	1317	5	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	5636	1713	5605	-1713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGGGACTGGCTCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	6121625	6119584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591
ENSMUSG00000024797.15_6119643_6121682_1	chr19	-	1316	5	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	5579	1771	5548	-1771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTATGTGAAGGTGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	6121682	6119642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591
ENSMUSG00000024797.15_6119696_6121738_1	chr19	-	1319	5	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	5523	1824	5492	-1824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTGAGCACACTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	6121738	6119695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591
ENSMUSG00000024797.15_6119901_6126465_1	chr19	-	1361	5	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	796	2029	765	-2029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGGTGCAGGTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	6126465	6119900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392
ENSMUSG00000024797.15_6120060_6127034_1	chr19	-	1313	6	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	227	2188	196	-2188	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATCCGCTCCATGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	6127034	6120059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ENSMUSG00000024797.15_6120525_6127230_1	chr19	-	1409	5	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	31	2653	0	-2653	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCATCTCTTTACCGCC	NA	NA	NA	NA	NA	NA	NA	NA	6127230	6120524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ENSMUSG00000024797.15_6120597_6127230_1	chr19	-	1337	5	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	31	2725	0	-2725	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGCCTGGCTGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	6127230	6120596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ENSMUSG00000024799.17_6117872_6120604_1	chr19	-	1315	6	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	6657	0	6626	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAAGAGCAGCAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	6120604	6117871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468
ENSMUSG00000024803.10_36089367_36095763_1	chr19	-	1481	7	ISM	ENSMUSG00000024803.10	ENSMUST00000025718.10	1818	9	1547	1	1547	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCGTGTTCTAAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	36095763	36089366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_36090218_36092388_36092476_36092598_36092698_36092872_36092972_36094170_36094270_36095233_36095342_36095625
ENSMUSG00000024803.10_36089367_36096673_1	chr19	-	1548	8	ISM	ENSMUSG00000024803.10	ENSMUST00000237142.2	2020	9	826	2	637	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCGTGTTCTAAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	36096673	36089366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_36090218_36092376_36092476_36092598_36092698_36092872_36092972_36094170_36094270_36095233_36095342_36095625_36095764_36096618
ENSMUSG00000024803.10_36089367_36096798_1	chr19	-	1673	8	ISM	ENSMUSG00000024803.10	ENSMUST00000237142.2	2020	9	701	2	512	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCGTGTTCTAAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	36096798	36089366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_36090218_36092376_36092476_36092598_36092698_36092872_36092972_36094170_36094270_36095233_36095342_36095625_36095764_36096618
ENSMUSG00000024803.10_36089513_36097310_1	chr19	-	1676	9	NNC	ENSMUSG00000024803.10	novel	2020	9	NA	NA	0	-147	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	995	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGGAGATGGAGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	36097310	36089512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_36090218_36092376_36092469_36092598_36092698_36092872_36092972_36094170_36094270_36095233_36095342_36095625_36095764_36096618_36096799_36097154
ENSMUSG00000024803.10_36089580_36096798_1	chr19	-	1448	8	ISM	ENSMUSG00000024803.10	ENSMUST00000025718.10	1818	9	512	214	512	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTACCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	36096798	36089579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_36090218_36092388_36092476_36092598_36092698_36092872_36092972_36094170_36094270_36095233_36095342_36095625_36095764_36096618
ENSMUSG00000024803.10_36089580_36097310_1	chr19	-	1616	9	FSM	ENSMUSG00000024803.10	ENSMUST00000237142.2	2020	9	189	215	0	-214	multi-exon	FALSE	canonical	NA	NA	NA	NA	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTACCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	36097310	36089579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_36090218_36092376_36092476_36092598_36092698_36092872_36092972_36094170_36094270_36095233_36095342_36095625_36095764_36096618_36096799_36097154
ENSMUSG00000024803.10_36089580_36097310_2	chr19	-	1609	9	NNC	ENSMUSG00000024803.10	novel	2020	9	NA	NA	0	-214	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTACCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	36097310	36089579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_36090218_36092376_36092476_36092598_36092698_36092872_36092972_36094170_36094270_36095233_36095342_36095625_36095764_36096618_36096792_36097154
ENSMUSG00000024803.10_36089681_36097310_1	chr19	-	1503	9	FSM	ENSMUSG00000024803.10	ENSMUST00000025718.10	1818	9	0	315	0	-315	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAATGAAGCAACAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	36097310	36089680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_36090218_36092388_36092476_36092598_36092698_36092872_36092972_36094170_36094270_36095233_36095342_36095625_36095764_36096618_36096799_36097154
ENSMUSG00000024812.12_24072585_24078117_1	chr19	-	508	3	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	42091	562	42091	-562	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTGTATTAACCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	24078117	24072584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24072955_24073947_24074034_24078065
ENSMUSG00000024812.12_24072632_24078188_1	chr19	-	532	3	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	42020	609	42020	-609	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAGAGAAACAGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	24078188	24072631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24072955_24073947_24074034_24078065
ENSMUSG00000024812.12_24072844_24086026_1	chr19	-	529	5	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	34182	821	34182	-821	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAAGCGTGGTTACTACA	NA	NA	NA	NA	NA	NA	NA	NA	24086026	24072843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24072955_24073947_24074034_24078065_24078279_24079260_24079362_24086008
ENSMUSG00000024812.12_24072904_24086068_1	chr19	-	511	5	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	34140	881	34140	-881	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGAAGCTACGGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	24086068	24072903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24072955_24073947_24074034_24078065_24078279_24079260_24079362_24086008
ENSMUSG00000024812.12_24072925_24086157_1	chr19	-	579	5	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	34051	902	34051	-902	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGACTTTACCAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	24086157	24072924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24072955_24073947_24074034_24078065_24078279_24079260_24079362_24086008
ENSMUSG00000024812.12_24078215_24088436_1	chr19	-	508	5	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	31772	6192	31772	-6192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAGTTGTGACAGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	24088436	24078214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384
ENSMUSG00000024812.12_24079300_24088868_1	chr19	-	528	5	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	31340	7277	31340	-7277	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCAGCAAAACGAAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	24088868	24079299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789
ENSMUSG00000024812.12_24086092_24090143_1	chr19	-	532	5	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	30065	14069	30065	-14069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTCCAACATCCAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24090143	24086091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109
ENSMUSG00000024812.12_24086134_24090210_1	chr19	-	557	5	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	29998	14111	29998	-14111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGGATTCCAGACAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	24090210	24086133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109
ENSMUSG00000024812.12_24086200_24090261_1	chr19	-	542	5	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	29947	14177	29947	-14177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACCCCCAAAGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	24090261	24086199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109
ENSMUSG00000024812.12_24088875_24097459_1	chr19	-	580	4	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	22749	16852	22749	-16852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCGCAAGAGCCGGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	24097459	24088874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24088984_24090109_24090321_24091439_24091549_24097308
ENSMUSG00000024812.12_24090211_24099476_1	chr19	-	525	5	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	20732	18188	20732	-18188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGAGTGGTAGACACGCT	NA	NA	NA	NA	NA	NA	NA	NA	24099476	24090210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388
ENSMUSG00000024812.12_24091440_24099735_1	chr19	-	570	5	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	20473	19417	20473	-19417	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCAAGTTTGGTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	24099735	24091439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626
ENSMUSG00000024812.12_24097410_24103093_1	chr19	-	539	6	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	17115	25387	17115	-25387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGCTGGTGGAAACGAC	NA	NA	NA	NA	NA	NA	NA	NA	24103093	24097409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068
ENSMUSG00000024812.12_24099445_24108300_1	chr19	-	527	5	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	11908	27422	11908	-27422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCGGGGGTCACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	24108300	24099444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218
ENSMUSG00000024812.12_24099498_24108350_1	chr19	-	524	5	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	11858	27475	11858	-27475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCCAGGATGGGTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	24108350	24099497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218
ENSMUSG00000024812.12_24099710_24108477_1	chr19	-	543	4	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	11731	27687	11731	-27687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTCTCCAGAGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	24108477	24099709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24099736_24101931_24102086_24103068_24103173_24108218
ENSMUSG00000024812.12_24102011_24108597_1	chr19	-	558	3	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	11611	29988	11611	-29988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGTGGTGTTGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	24108597	24102010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24102086_24103068_24103173_24108218
ENSMUSG00000024812.12_24103148_24108729_1	chr19	-	536	2	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	11479	31125	11479	-31125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTTCATCAAAGAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	24108729	24103147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24103173_24108218
ENSMUSG00000024812.12_24108340_24109989_1	chr19	-	518	2	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	10219	36317	10219	-36317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAACACCTACGTTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	24109989	24108339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24108838_24109969
ENSMUSG00000024812.12_24108464_24112244_1	chr19	-	508	3	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	7964	36441	7964	-36441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTACGACCGAGACTATG	NA	NA	NA	NA	NA	NA	NA	NA	24112244	24108463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24108838_24109969_24110073_24112213
ENSMUSG00000024812.12_24108515_24112300_1	chr19	-	513	3	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	7908	36492	7908	-36492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCGCGACTTTGTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	24112300	24108514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24108838_24109969_24110073_24112213
ENSMUSG00000024816.13_5901335_5906723_1	chr19	-	1547	2	ISM	ENSMUSG00000024816.13	ENST00000355991.9	1294	10	18415	-1273	18415	1273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATAAATGTCTTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	5906723	5901334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5902771_5906612
ENSMUSG00000024816.13_5901499_5912312_1	chr19	-	1511	3	ISM	ENSMUSG00000024816.13	ENST00000355991.9	1294	10	12826	-1109	12826	1109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAACCTTTAGGTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	5912312	5901498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5902771_5906612_5906818_5912278
ENSMUSG00000024816.13_5901651_5913282_1	chr19	-	1500	4	ISM	ENSMUSG00000024816.13	ENST00000355991.9	1294	10	11856	-957	11856	957	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGCCAGTGAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	5913282	5901650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251
ENSMUSG00000024816.13_5901712_5913340_1	chr19	-	1497	4	ISM	ENSMUSG00000024816.13	ENST00000355991.9	1294	10	11798	-896	11798	896	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTTCTTGGTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	5913340	5901711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251
ENSMUSG00000024816.13_5901976_5915321_1	chr19	-	1493	5	ISM	ENSMUSG00000024816.13	ENST00000355991.9	1294	10	9817	-632	9817	632	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTGTGCTCTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	5915321	5901975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096
ENSMUSG00000024816.13_5902207_5920140_1	chr19	-	1590	8	ISM	ENSMUSG00000024816.13	ENST00000355991.9	1294	10	4998	-401	4998	401	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCACCTTTTCCCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	5920140	5902206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038
ENSMUSG00000024816.13_5902393_5923282_1	chr19	-	1490	9	ISM	ENSMUSG00000024816.13	ENSMUST00000025728.13	4504	11	2020	2663	1856	215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCTCCTGCTCTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	5923282	5902392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196
ENSMUSG00000024816.13_5902436_5923344_1	chr19	-	1509	9	ISM	ENSMUSG00000024816.13	ENSMUST00000025728.13	4504	11	1958	2706	1794	172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTCTTCCTCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	5923344	5902435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196
ENSMUSG00000024816.13_5902607_5924824_1	chr19	-	1277	9	ISM	ENSMUSG00000024816.13	ENST00000355991.9	1294	10	314	-1	314	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAACCAGGCACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	5924824	5902606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5924737
ENSMUSG00000024816.13_5902607_5925267_1	chr19	-	1592	11	FSM	ENSMUSG00000024816.13	ENSMUST00000025728.13	4504	11	35	2877	35	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAACCAGGCACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	5925267	5902606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924823_5925118
ENSMUSG00000024817.14_30066596_30070706_1	chr19	+	836	3	ISM	ENSMUSG00000024817.14	ENSMUST00000025739.14	3536	16	58683	416	58683	-416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTAATATGCATACTAC	NA	NA	NA	NA	NA	NA	NA	NA	30066595	30070706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_30066744_30069440_30069540_30070117
ENSMUSG00000024818.16_5928684_5935022_2	chr19	+	797	5	FSM	ENSMUSG00000024818.16	ENST00000534028.5	989	5	192	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAGGCGATACTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	5928683	5935022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5928720_5929876_5929921_5930467_5930654_5934372_5934632_5934750
ENSMUSG00000024818.16_5930111_5934913_1	chr19	+	494	3	NNC	ENSMUSG00000024818.16	novel	1908	5	NA	NA	1428	-109	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGGGGTCTTTTTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	5930110	5934913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_5930185_5934372_5934632_5934752
ENSMUSG00000024824.8_4245195_4251399_1	chr19	-	1923	10	NNC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	236	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTGTTCCCCGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	4251399	4245194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4246082_4246179_4246382_4247111_4247245_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327
ENSMUSG00000024826.16_5948004_5952746_1	chr19	-	1068	5	ISM	ENSMUSG00000024826.16	ENSMUST00000118623.2	2406	12	10074	589	10074	-589	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGGACGAGCAGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	5952746	5948003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658
ENSMUSG00000024826.16_5948223_5954523_1	chr19	-	1062	8	ISM	ENSMUSG00000024826.16	ENSMUST00000118623.2	2406	12	8297	808	8297	-808	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCCAGGGTTTTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	5954523	5948222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5953758_5953801_5954267_5954347_5954481
ENSMUSG00000024827.11_30075847_30102175_1	chr19	-	1615	9	FSM	ENSMUSG00000024827.11	ENST00000639318.1	1568	9	39	-86	39	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAATTTCCCATTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	30102175	30075846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_30076511_30077236_30077318_30078142_30078316_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121
ENSMUSG00000024829.13_3332901_3342594_1	chr19	+	895	7	FSM	ENSMUSG00000024829.13	ENSMUST00000025745.10	1138	7	0	243	0	-243	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCATCTCCTGTAGGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	3332900	3342594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3342435
ENSMUSG00000024829.13_3333055_3342660_1	chr19	+	807	7	FSM	ENSMUSG00000024829.13	ENSMUST00000025745.10	1138	7	154	177	-5	-177	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTCCAGGCTTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	3333054	3342660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3342435
ENSMUSG00000024829.13_3333064_3342727_1	chr19	+	865	7	FSM	ENSMUSG00000024829.13	ENSMUST00000025745.10	1138	7	163	110	4	-110	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTTGTCTGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	3333063	3342727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3342435
ENSMUSG00000024829.13_3334757_3342839_1	chr19	+	872	6	ISM	ENSMUSG00000024829.13	ENSMUST00000025745.10	1138	7	1856	-2	1697	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAATGTGTGCTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	3334756	3342839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3342435
ENSMUSG00000024831.15_3310007_3331538_1	chr19	-	4271	14	ISM	ENSMUSG00000024831.15	ENSMUST00000025751.11	5569	15	1479	931	1249	917	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACGCCTGTAGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	3331538	3310006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3311636_3311974_3312145_3314810_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418
ENSMUSG00000024831.15_3315242_3324420_1	chr19	-	1333	8	ISM	ENSMUSG00000024831.15	ENST00000255078.8	2977	15	8367	3810	8367	-3810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGGGCTACGATTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	3324420	3315241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355
ENSMUSG00000024831.15_3315364_3326828_1	chr19	-	1420	9	ISM	ENSMUSG00000024831.15	ENST00000255078.8	2977	15	5959	3932	5959	-3932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCCCTAGACATGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	3326828	3315363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755
ENSMUSG00000024831.15_3318710_3332760_1	chr19	-	1339	9	ISM	ENSMUSG00000024831.15	ENST00000255078.8	2977	15	27	7278	27	-7278	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACGGGCAGCTTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	3332760	3318709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
ENSMUSG00000024835.16_4199481_4200145_1	chr19	+	243	3	ISM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	863	3889	863	-3889	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAGGGGCATACCAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	4199480	4200145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4199544_4199861_4199985_4200088
ENSMUSG00000024835.16_4200706_4201613_1	chr19	+	260	3	ISM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	2088	2421	2088	-2421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCCCCCTACATCCACT	NA	NA	NA	NA	NA	NA	NA	NA	4200705	4201613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4200826_4201393_4201499_4201578
ENSMUSG00000024835.16_4201579_4203265_1	chr19	+	244	3	ISM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	2961	769	2961	-769	internal_fragment	TRUE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGAGGCTGCTCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	4201578	4203265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4201725_4202520_4202579_4203225
ENSMUSG00000024835.16_4203338_4203716_1	chr19	+	273	2	ISM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	4720	318	4720	-318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGGACCACCAGGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	4203337	4203716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4203490_4203595
ENSMUSG00000024835.16_4203382_4203717_1	chr19	+	230	2	ISM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	4764	317	4764	-317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGACCACCAGGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	4203381	4203717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4203490_4203595
ENSMUSG00000024835.16_4203435_4203766_1	chr19	+	226	2	ISM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	4817	268	4817	-268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTAGCTTCTGTGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	4203434	4203766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4203490_4203595
ENSMUSG00000024841.9_5417050_5420072_1	chr19	+	793	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	281	1482	281	-1482	multi-exon	TRUE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTGAAGAAGACGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	5417049	5420072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ENSMUSG00000024841.9_5417050_5420132_1	chr19	+	853	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	281	1422	281	-1422	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCTCAGGGACTACCC	NA	NA	NA	NA	NA	NA	NA	NA	5417049	5420132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ENSMUSG00000024841.9_5418095_5420252_1	chr19	+	775	5	ISM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	1326	1302	1326	-1302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCCTGGTGGGTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	5418094	5420252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ENSMUSG00000024841.9_5418219_5420362_1	chr19	+	761	5	ISM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	1450	1192	1450	-1192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAGGAAATGGTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	5418218	5420362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ENSMUSG00000024841.9_5418484_5420477_1	chr19	+	756	4	ISM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	1715	1077	1715	-1077	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTTAGTCGTGATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	5418483	5420477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5418559_5418644_5418754_5418922_5418971_5419953
ENSMUSG00000024841.9_5418540_5420536_1	chr19	+	759	4	ISM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	1771	1018	1771	-1018	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTAAGCACAGCTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	5418539	5420536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5418559_5418644_5418754_5418922_5418971_5419953
ENSMUSG00000024841.9_5418731_5420660_1	chr19	+	778	3	ISM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	1962	894	1962	-894	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCCAGAATGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	5418730	5420660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5418754_5418922_5418971_5419953
ENSMUSG00000024844.16_5414668_5417196_1	chr19	-	1253	3	NNC	ENSMUSG00000024844.16	novel	1261	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	5417196	5414667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_5415187_5415845_5415979_5416595
ENSMUSG00000024845.20_4175979_4181728_1	chr19	+	875	6	FSM	ENSMUSG00000024845.20	ENSMUST00000150627.11	1472	6	19	578	4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGACAGTTGCACTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	4175978	4181728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181227_4181282_4181360
ENSMUSG00000024845.20_4175989_4181850_1	chr19	+	1005	7	FSM	ENSMUSG00000024845.20	ENSMUST00000139987.10	1488	7	29	454	0	119	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGGACAACCTGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	4175988	4181850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4176200_4177055_4177121_4177575_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
ENSMUSG00000024845.20_4177571_4181956_1	chr19	+	795	4	ISM	ENSMUSG00000024845.20	ENSMUST00000150627.11	1472	6	1611	350	1582	225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAACACTGCCCCCTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	4177570	4181956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4177639_4177758_4177836_4181227_4181282_4181360
ENSMUSG00000024845.20_4177808_4182076_1	chr19	+	798	3	ISM	ENSMUSG00000024845.20	ENSMUST00000150627.11	1472	6	1848	230	1819	-208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCATGTGCCCCTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	4177807	4182076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4177836_4181227_4181282_4181360
ENSMUSG00000024846.7_5396429_5398443_1	chr19	-	1668	2	ISM	ENSMUSG00000024846.7	ENSMUST00000025764.6	3951	3	1159	1696	1159	-1696	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGGGACAGGCCATAGT	NA	NA	NA	NA	NA	NA	NA	NA	5398443	5396428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5398078_5398424
ENSMUSG00000024846.7_5396475_5398505_1	chr19	-	1684	2	ISM	ENSMUSG00000024846.7	ENSMUST00000025764.6	3951	3	1097	1742	1097	-1742	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCACATCCAGAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	5398505	5396474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5398078_5398424
ENSMUSG00000024846.7_5396538_5398607_1	chr19	-	1723	2	ISM	ENSMUSG00000024846.7	ENSMUST00000025764.6	3951	3	995	1805	995	-1805	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGGAGAAGCATTAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	5398607	5396537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5398078_5398424
ENSMUSG00000024846.7_5396814_5399385_1	chr19	-	1653	3	FSM	ENSMUSG00000024846.7	ENSMUST00000025764.6	3951	3	217	2081	217	-2081	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCCATGGAGTTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	5399385	5396813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5398078_5398424_5398551_5399122
ENSMUSG00000024847.16_4164446_4165498_1	chr19	-	661	3	ISM	ENSMUSG00000024847.16	ENST00000684006.1	1200	6	6027	-18	6027	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATCTTGAAGGCTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	4165498	4164445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4164786_4165080_4165223_4165319
ENSMUSG00000024847.16_4164446_4171575_1	chr19	-	1090	5	FSM	ENSMUSG00000024847.16	ENST00000528641.7	1048	5	-23	-19	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATCTTGAAGGCTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	4171575	4164445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4168086_4168267_4171335
ENSMUSG00000024847.16_4164464_4166071_1	chr19	-	734	4	ISM	ENSMUSG00000024847.16	ENST00000683237.1	1204	6	5454	1	5454	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTTGCAGAACTAATC	NA	NA	NA	NA	NA	NA	NA	NA	4166071	4164463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4164797_4165088_4165223_4165319_4165497_4165981
ENSMUSG00000024847.16_4164464_4171575_1	chr19	-	1072	5	FSM	ENSMUSG00000024847.16	ENST00000528641.7	1048	5	-23	-1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTTGCAGAACTAATC	NA	NA	NA	NA	NA	NA	NA	NA	4171575	4164463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4168086_4168267_4171335
ENSMUSG00000024847.16_4164581_4166073_1	chr19	-	616	4	ISM	ENSMUSG00000024847.16	ENST00000684006.1	1200	6	5452	117	5452	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGCCCTGCCTTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	4166073	4164580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4164786_4165080_4165223_4165319_4165497_4165981
ENSMUSG00000024847.16_4164637_4168124_1	chr19	-	695	5	ISM	ENSMUSG00000024847.16	ENST00000684006.1	1200	6	3401	173	3401	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGAGGAGGACAAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	4168124	4164636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4164786_4165080_4165223_4165319_4165497_4165981_4166171_4168086
ENSMUSG00000024847.16_4164640_4166119_1	chr19	-	603	4	ISM	ENSMUSG00000024847.16	ENST00000684006.1	1200	6	5406	176	5406	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGATGAGGAGGACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	4166119	4164639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4164786_4165080_4165223_4165319_4165497_4165981
ENSMUSG00000024847.16_4164675_4168122_1	chr19	-	658	5	ISM	ENSMUSG00000024847.16	ENST00000683237.1	1204	6	3403	212	3403	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGCTGCGGGCCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	4168122	4164674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4164797_4165088_4165223_4165319_4165497_4165981_4166171_4168086
ENSMUSG00000024847.16_4164725_4168173_1	chr19	-	659	5	ISM	ENSMUSG00000024847.16	ENST00000683237.1	1204	6	3352	262	3352	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGCCAAGGTGTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	4168173	4164724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4164797_4165088_4165223_4165319_4165497_4165981_4166171_4168086
ENSMUSG00000024847.16_4164742_4168133_1	chr19	-	599	5	ISM	ENSMUSG00000024847.16	ENST00000684006.1	1200	6	3392	278	3392	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGAGGCCCAGGCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	4168133	4164741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4164786_4165080_4165223_4165319_4165497_4165981_4166171_4168086
ENSMUSG00000024847.16_4164777_4168223_1	chr19	-	657	5	ISM	ENSMUSG00000024847.16	ENST00000683237.1	1204	6	3302	314	3302	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGGGTAAGGCCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	4168223	4164776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4164797_4165088_4165223_4165319_4165497_4165981_4166171_4168086
ENSMUSG00000024851.15_4151142_4154942_1	chr19	+	812	5	ISM	ENSMUSG00000024851.15	ENSMUST00000100022.4	4512	23	520	9023	520	-9023	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTGCAACACTGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	4151141	4154942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4151263_4152672_4152888_4152974_4153097_4153260_4153486_4154813
ENSMUSG00000024851.15_4156735_4158753_1	chr19	+	773	5	ISM	ENSMUSG00000024851.15	ENSMUST00000100022.4	4512	23	6113	5212	6113	-5212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCCCCACGAACGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	4156734	4158753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4156963_4157785_4157976_4158085_4158194_4158422_4158581_4158664
ENSMUSG00000024853.11_5324296_5329398_1	chr19	-	648	4	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	16085	336	16085	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTGCAAAAGCATCTAC	NA	NA	NA	NA	NA	NA	NA	NA	5329398	5324295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296
ENSMUSG00000024853.11_5324514_5329922_1	chr19	-	626	6	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	15561	554	15561	-554	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAGAAATACAAGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	5329922	5324513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869
ENSMUSG00000024853.11_5324916_5333736_1	chr19	-	609	6	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	11747	956	11747	-956	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCAGAAGTACGAGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	5333736	5324915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670
ENSMUSG00000024853.11_5324975_5333948_1	chr19	-	655	7	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	11535	1015	11535	-1015	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGGTGTGGAAGTAGCG	NA	NA	NA	NA	NA	NA	NA	NA	5333948	5324974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885
ENSMUSG00000024853.11_5325147_5334639_1	chr19	-	633	7	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	10844	1187	10844	-1187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTTGGGGGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	5334639	5325146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602
ENSMUSG00000024853.11_5329291_5334752_1	chr19	-	707	6	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	10731	5331	10731	-5331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTCACCAGCAGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	5334752	5329290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602
ENSMUSG00000024853.11_5329549_5336291_1	chr19	-	623	6	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	9192	5589	9192	-5589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCGATGAAGACAAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	5336291	5329548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216
ENSMUSG00000024853.11_5329600_5336344_1	chr19	-	625	6	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	9139	5640	9139	-5640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTGGAACCATCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	5336344	5329599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216
ENSMUSG00000024853.11_5329625_5336427_1	chr19	-	683	6	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	9056	5665	9056	-5665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATTGACCGGACCCCG	NA	NA	NA	NA	NA	NA	NA	NA	5336427	5329624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216
ENSMUSG00000024853.11_5333750_5336894_1	chr19	-	634	6	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	8589	9790	8589	-9790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCCATGCAGCGATACG	NA	NA	NA	NA	NA	NA	NA	NA	5336894	5333749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838
ENSMUSG00000024853.11_5334639_5337176_1	chr19	-	641	5	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	8307	10679	8307	-10679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAACTCACCATCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	5337176	5334638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096
ENSMUSG00000024853.11_5334698_5337221_1	chr19	-	627	5	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	8262	10738	8262	-10738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGATCGACATTGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	5337221	5334697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096
ENSMUSG00000024853.11_5334739_5337299_1	chr19	-	664	5	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	8184	10779	8184	-10779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGAAGTCAAAAATGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	5337299	5334738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096
ENSMUSG00000024853.11_5336401_5337995_1	chr19	-	629	6	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	7488	12441	7488	-12441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGACCCCAAGCTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	5337995	5336400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937
ENSMUSG00000024853.11_5336926_5341392_1	chr19	-	626	6	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	4091	12966	4091	-12966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGGAGAGCTCTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	5341392	5336925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332
ENSMUSG00000024853.11_5337563_5343347_1	chr19	-	657	5	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	2136	13603	2136	-13603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGATGAAGCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	5343347	5337562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107
ENSMUSG00000024856.11_4147182_4149017_1	chr19	+	1070	4	NIC	ENSMUSG00000024856.11	novel	1080	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	5114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTTCTGTGTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	4147181	4149017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_+_4147508_4147816_4147908_4148004_4148138_4148497
ENSMUSG00000024856.11_4147182_4149017_2	chr19	+	1073	4	NNC	ENSMUSG00000024856.11	novel	1080	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTTCTGTGTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	4147181	4149017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_4147508_4147823_4147918_4148004_4148138_4148497
ENSMUSG00000024856.11_4147182_4149017_3	chr19	+	1071	4	NNC	ENSMUSG00000024856.11	novel	1080	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTTCTGTGTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	4147181	4149017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_4147508_4147816_4147918_4148013_4148138_4148497
ENSMUSG00000024857.17_4133519_4137155_1	chr19	+	563	5	NNC	ENSMUSG00000024857.17	novel	535	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	836	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCGGCCTGGAGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	4133518	4137155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_4133645_4135558_4135694_4136217_4136328_4136448_4136596_4137110
ENSMUSG00000024857.17_4133519_4137155_2	chr19	+	558	5	NNC	ENSMUSG00000024857.17	novel	535	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	680	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCGGCCTGGAGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	4133518	4137155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_4133639_4135558_4135694_4136217_4136328_4136447_4136596_4137110
ENSMUSG00000024857.17_4133519_4137155_3	chr19	+	564	5	FSM	ENSMUSG00000024857.17	ENST00000353903.9	535	5	-29	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCGGCCTGGAGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	4133518	4137155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4133645_4135558_4135694_4136217_4136328_4136447_4136596_4137110
ENSMUSG00000024857.17_4133519_4137155_4	chr19	+	563	5	NNC	ENSMUSG00000024857.17	novel	535	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCGGCCTGGAGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	4133518	4137155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_4133645_4135558_4135694_4136217_4136328_4136447_4136596_4137111
ENSMUSG00000024857.17_4133519_4137155_5	chr19	+	577	5	NNC	ENSMUSG00000024857.17	novel	535	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCGGCCTGGAGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	4133518	4137155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_4133658_4135558_4135694_4136217_4136328_4136447_4136596_4137110
ENSMUSG00000024857.17_4133519_4137155_6	chr19	+	569	5	NNC	ENSMUSG00000024857.17	novel	535	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCGGCCTGGAGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	4133518	4137155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_4133658_4135566_4135694_4136217_4136328_4136447_4136596_4137110
ENSMUSG00000024858.15_4336030_4356250_1	chr19	-	1465	14	NNC	ENSMUSG00000024858.15	novel	1439	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	4356250	4336029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4336193_4339990_4340034_4340101_4340197_4340423_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ENSMUSG00000024858.15_4336030_4356250_10	chr19	-	1464	14	NNC	ENSMUSG00000024858.15	novel	1439	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	4356250	4336029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4336193_4339990_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342391_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ENSMUSG00000024858.15_4336030_4356250_11	chr19	-	1461	14	NNC	ENSMUSG00000024858.15	novel	1439	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	4356250	4336029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4336193_4339990_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344882_4344955_4355929
ENSMUSG00000024858.15_4336030_4356250_12	chr19	-	1458	14	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	4356250	4336029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4336185_4339990_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ENSMUSG00000024858.15_4336030_4356250_13	chr19	-	1464	14	NNC	ENSMUSG00000024858.15	novel	1439	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	4356250	4336029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4336193_4339990_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341619_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ENSMUSG00000024858.15_4336030_4356250_2	chr19	-	1465	14	NNC	ENSMUSG00000024858.15	novel	1439	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	4356250	4336029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4336193_4339990_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340800_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ENSMUSG00000024858.15_4336030_4356250_3	chr19	-	1457	14	NNC	ENSMUSG00000024858.15	novel	1439	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	4356250	4336029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4336193_4339990_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344946_4355929
ENSMUSG00000024858.15_4336030_4356250_5	chr19	-	1464	14	NNC	ENSMUSG00000024858.15	novel	1439	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	4356250	4336029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4336193_4339990_4340034_4340103_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ENSMUSG00000024858.15_4336030_4356250_6	chr19	-	1460	14	NNC	ENSMUSG00000024858.15	novel	1439	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	4356250	4336029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4336193_4339990_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342668_4342794_4342869_4344877_4344955_4355929
ENSMUSG00000024858.15_4336030_4356250_7	chr19	-	1465	14	NNC	ENSMUSG00000024858.15	novel	1439	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	4356250	4336029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4336193_4339990_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342572_4342674_4342794_4342869_4344877_4344955_4355929
ENSMUSG00000024858.15_4336030_4356250_8	chr19	-	1466	14	FSM	ENSMUSG00000024858.15	ENST00000526285.1	1439	14	-8	-19	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	4356250	4336029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4336193_4339990_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ENSMUSG00000024858.15_4336030_4356250_9	chr19	-	1459	14	NNC	ENSMUSG00000024858.15	novel	1439	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	4356250	4336029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4336193_4339990_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341663_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ENSMUSG00000024862.17_5157774_5162871_1	chr19	-	2093	12	ISM	ENSMUSG00000024862.17	ENST00000394067.7	2899	16	5510	-1	1342	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTGTTTTGAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	5162871	5157773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745
ENSMUSG00000024862.17_5157774_5163829_1	chr19	-	2211	13	ISM	ENSMUSG00000024862.17	ENST00000394067.7	2899	16	4552	-1	384	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTGTTTTGAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	5163829	5157773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808
ENSMUSG00000024862.17_5157920_5163878_1	chr19	-	2114	13	ISM	ENSMUSG00000024862.17	ENST00000421552.5	2667	15	4503	144	335	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATCCTGCCACGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	5163878	5157919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808
ENSMUSG00000024862.17_5157949_5167250_1	chr19	-	2114	14	ISM	ENSMUSG00000024862.17	ENST00000421552.5	2667	15	1131	173	1075	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACCCCACCCTGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	5167250	5157948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5167221
ENSMUSG00000024862.17_5158003_5167271_1	chr19	-	2075	14	NNC	ENSMUSG00000024862.17	novel	2667	15	NA	NA	1054	-227	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGCACTGTCCTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	5167271	5158002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_5158717_5159136_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5167221
ENSMUSG00000024862.17_5158197_5159568_1	chr19	-	667	3	ISM	ENSMUSG00000024862.17	ENST00000394065.2	2419	13	4645	421	4645	-421	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGTGGTACCGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	5159568	5158196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5158691_5159328_5159454_5159520
ENSMUSG00000024862.17_5158197_5168325_1	chr19	-	2190	15	FSM	ENSMUSG00000024862.17	ENST00000421552.5	2667	15	56	421	0	-421	multi-exon	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGTGGTACCGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	5168325	5158196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5167221_5167461_5168211
ENSMUSG00000024862.17_5158310_5168325_1	chr19	-	2077	15	FSM	ENSMUSG00000024862.17	ENST00000421552.5	2667	15	56	534	0	-534	multi-exon	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTCCCGGCCGTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	5168325	5158309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5167221_5167461_5168211
ENSMUSG00000024862.17_5158344_5159796_1	chr19	-	658	4	ISM	ENSMUSG00000024862.17	ENST00000394065.2	2419	13	4417	568	4417	-568	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTACTTGCTGTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	5159796	5158343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5158691_5159328_5159454_5159520_5159671_5159760
ENSMUSG00000024862.17_5158636_5161200_1	chr19	-	592	7	ISM	ENSMUSG00000024862.17	ENST00000394065.2	2419	13	3013	860	3013	-860	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTGAAGGGGCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	5161200	5158635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5158691_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165
ENSMUSG00000024862.17_5161504_5164038_1	chr19	-	616	6	ISM	ENSMUSG00000024862.17	ENST00000394065.2	2419	13	175	3728	175	-3728	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAGGGCAAAGCTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	5164038	5161503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968
ENSMUSG00000024862.17_5161680_5164140_1	chr19	-	622	5	ISM	ENSMUSG00000024862.17	ENST00000394065.2	2419	13	73	3904	73	-3904	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGCAAGAGAGCACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	5164140	5161679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968
ENSMUSG00000024870.7_5150566_5154697_1	chr19	-	196	3	ISM	ENSMUSG00000024870.7	ENSMUST00000025804.7	1913	6	2403	1333	2307	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGTGCCAAGAATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	5154697	5150565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5150601_5150694_5150827_5154668
ENSMUSG00000024870.7_5150759_5154764_1	chr19	-	164	2	ISM	ENSMUSG00000024870.7	ENSMUST00000236149.2	757	5	2269	343	2240	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCTGGTAGGCAACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	5154764	5150758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5150827_5154668
ENSMUSG00000024871.12_4054511_4056133_1	chr19	+	216	3	ISM	ENSMUSG00000024871.12	ENSMUST00000025806.5	1469	11	1198	872	907	-692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGGAGCGTGGCCGCAT	NA	NA	NA	NA	NA	NA	NA	NA	4054510	4056133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4054649_4054762_4054817_4056109
ENSMUSG00000024871.12_4054762_4056269_1	chr19	+	212	2	ISM	ENSMUSG00000024871.12	ENST00000514950.1	1104	10	1158	556	1158	-556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTACAAACAGGCAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	4054761	4056269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4054817_4056112
ENSMUSG00000024871.12_4056201_4056605_1	chr19	+	203	3	ISM	ENSMUSG00000024871.12	ENST00000514950.1	1104	10	2597	220	2597	-220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGGGACTATGACCT	NA	NA	NA	NA	NA	NA	NA	NA	4056200	4056605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4056268_4056357_4056440_4056551
ENSMUSG00000024875.6_5138588_5142529_1	chr19	+	1093	8	FSM	ENSMUSG00000024875.6	ENSMUST00000025811.6	1488	8	15	380	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTTGGCTTGACCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	5138587	5142529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
ENSMUSG00000024875.6_5139854_5142909_1	chr19	+	1018	6	ISM	ENSMUSG00000024875.6	ENSMUST00000236687.2	1178	8	898	-376	898	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTATTCATATTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5139853	5142909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
ENSMUSG00000024878.10_24897280_24898436_1	chr19	-	839	2	ISM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	40529	0	40415	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGTGTGATGGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	24898436	24897279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24898067_24898384
ENSMUSG00000024878.10_24897408_24898493_1	chr19	-	768	2	ISM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	40472	128	40358	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGAACAGCCAGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	24898493	24897407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24898067_24898384
ENSMUSG00000024878.10_24897788_24918181_1	chr19	-	764	8	ISM	ENSMUSG00000024878.10	ENST00000433343.6	1201	15	20670	-156	20670	156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTGGAGGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	24918181	24897787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112
ENSMUSG00000024878.10_24897944_24938878_1	chr19	-	1116	14	NNC	ENSMUSG00000024878.10	novel	1142	14	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGGAAGAACTGACGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	24938878	24897943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24915759_24915805_24918112_24918195_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUSG00000024878.10_24897944_24938878_2	chr19	-	1121	14	FSM	ENSMUSG00000024878.10	ENST00000377342.9	1142	14	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGGAAGAACTGACGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	24938878	24897943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUSG00000024878.10_24897944_24938878_3	chr19	-	1021	12	NNC	ENSMUSG00000024878.10	novel	1142	14	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGGAAGAACTGACGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	24938878	24897943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24915759_24915805_24920046_24920094_24926540_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUSG00000024878.10_24897944_24938878_4	chr19	-	1034	13	FSM	ENSMUSG00000024878.10	ENST00000613508.4	1007	13	-27	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGGAAGAACTGACGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	24938878	24897943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24915759_24915805_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUSG00000024878.10_24897944_24938878_5	chr19	-	1115	14	NNC	ENSMUSG00000024878.10	novel	1142	14	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGGAAGAACTGACGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	24938878	24897943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926620_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUSG00000024878.10_24897944_24938878_6	chr19	-	1108	13	NNC	ENSMUSG00000024878.10	novel	1142	14	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGGAAGAACTGACGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	24938878	24897943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24915759_24915805_24918112_24918200_24920046_24920094_24926540_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUSG00000024878.10_24897944_24938878_7	chr19	-	1052	12	FSM	ENSMUSG00000024878.10	ENST00000377392.9	1028	12	21	-45	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGGAAGAACTGACGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	24938878	24897943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900164_24918112_24918200_24920046_24920094_24925382_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUSG00000024878.10_24897944_24938878_8	chr19	-	1115	13	NNC	ENSMUSG00000024878.10	novel	1142	14	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGGAAGAACTGACGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	24938878	24897943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24915759_24915805_24918112_24918200_24920046_24920122_24926561_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUSG00000024883.9_5100509_5102210_1	chr19	+	584	5	ISM	ENSMUSG00000024883.9	ENST00000530056.1	1889	9	101	2869	0	-2869	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTCCAGCCCTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	5100508	5102210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5100606_5101381_5101497_5101585_5101659_5101768_5101861_5102003
ENSMUSG00000024883.9_5100861_5106761_1	chr19	+	3846	10	FSM	ENSMUSG00000024883.9	ENSMUST00000025818.8	4184	10	0	338	0	-338	multi-exon	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTAGACTTTCAAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	5100860	5106761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5100970_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
ENSMUSG00000024883.9_5101192_5106915_1	chr19	+	3801	9	ISM	ENSMUSG00000024883.9	ENSMUST00000025818.8	4184	10	331	184	331	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGGTGGCCACGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	5101191	5106915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
ENSMUSG00000024883.9_5102070_5103196_1	chr19	+	691	2	ISM	ENSMUSG00000024883.9	ENST00000530056.1	1889	9	1662	1883	1209	-1883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCAGAAGCTGCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	5102069	5103196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5102745_5103180
ENSMUSG00000024883.9_5102189_5103666_1	chr19	+	719	3	ISM	ENSMUSG00000024883.9	ENST00000530056.1	1889	9	1781	1413	1328	-1413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTTTTGGCCCAGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	5102188	5103666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5102745_5103180_5103304_5103626
ENSMUSG00000024883.9_5102356_5103942_1	chr19	+	703	4	ISM	ENSMUSG00000024883.9	ENST00000530056.1	1889	9	1948	1137	1495	-1137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCGAGCACTGCCACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	5102355	5103942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5102745_5103180_5103304_5103626_5103759_5103883
ENSMUSG00000024883.9_5102415_5103988_1	chr19	+	690	4	ISM	ENSMUSG00000024883.9	ENST00000530056.1	1889	9	2007	1091	1554	-1091	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCTCTGGGAACAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	5102414	5103988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5102745_5103180_5103304_5103626_5103759_5103883
ENSMUSG00000024883.9_5102493_5104020_1	chr19	+	644	4	ISM	ENSMUSG00000024883.9	ENST00000530056.1	1889	9	2085	1059	1632	-1059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACAGCTTCCAGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	5102492	5104020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5102745_5103180_5103304_5103626_5103759_5103883
ENSMUSG00000024883.9_5102597_5104910_1	chr19	+	649	5	ISM	ENSMUSG00000024883.9	ENST00000530056.1	1889	9	2189	169	1736	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGTGCTACCAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	5102596	5104910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5102745_5103180_5103304_5103626_5103759_5103883_5104036_5104816
ENSMUSG00000024883.9_5102637_5105003_1	chr19	+	702	5	ISM	ENSMUSG00000024883.9	ENST00000530056.1	1889	9	2229	76	1776	-76	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGCCCACAGGCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	5102636	5105003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5102745_5103180_5103304_5103626_5103759_5103883_5104036_5104816
ENSMUSG00000024883.9_5102699_5105044_1	chr19	+	681	5	ISM	ENSMUSG00000024883.9	ENST00000530056.1	1889	9	2291	35	1838	-35	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCGGGCAGAGCGCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	5102698	5105044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5102745_5103180_5103304_5103626_5103759_5103883_5104036_5104816
ENSMUSG00000024885.10_3963491_3968208_1	chr19	-	861	3	ISM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	11600	0	11600	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACAGGTGTCTTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	3968208	3963490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3964085_3965293_3965394_3968041
ENSMUSG00000024885.10_3963715_3968761_1	chr19	-	796	4	ISM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	11047	224	11047	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGACCATAGAATCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	3968761	3963714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602
ENSMUSG00000024885.10_3963768_3968811_1	chr19	-	793	4	ISM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	10997	277	10997	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTGGACCTTTGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	3968811	3963767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602
ENSMUSG00000024885.10_3963872_3968882_1	chr19	-	760	4	ISM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	10926	381	10926	-381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCCTGGGGCACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	3968882	3963871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602
ENSMUSG00000024885.10_3964018_3970839_1	chr19	-	764	5	ISM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	8969	527	8969	-527	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGCGCAGCCCGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	3970839	3964017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602_3968990_3970796
ENSMUSG00000024885.10_3965293_3971268_1	chr19	-	823	5	ISM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	8540	1802	8540	-1802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAGCAGCAGAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	3971268	3965292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3965394_3968041_3968209_3968602_3968990_3970796_3970879_3971182
ENSMUSG00000024885.10_3968040_3971593_1	chr19	-	845	5	ISM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	8215	4549	8215	-4549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTCAAGTACCAGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	3971593	3968039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3968209_3968602_3968990_3970796_3970879_3971182_3971269_3971472
ENSMUSG00000024885.10_3968603_3973806_1	chr19	-	855	6	ISM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	6002	5112	6002	-5112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTTCCCTCTAACCTA	NA	NA	NA	NA	NA	NA	NA	NA	3973806	3968602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3968990_3970796_3970879_3971182_3971269_3971472_3971594_3971696_3971808_3973738
ENSMUSG00000024885.10_3968709_3973806_1	chr19	-	749	6	ISM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	6002	5218	6002	-5218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGCAGAATCATCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	3973806	3968708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3968990_3970796_3970879_3971182_3971269_3971472_3971594_3971696_3971808_3973738
ENSMUSG00000024885.10_3968855_3979756_1	chr19	-	759	7	ISM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	52	5364	52	-5364	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCCGCTACTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	3979756	3968854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3968990_3970796_3970879_3971182_3971269_3971472_3971594_3971696_3971808_3973738_3973902_3979695
ENSMUSG00000024887.11_31964092_32022349_1	chr19	-	1549	15	ISM	ENSMUSG00000024887.11	ENST00000329428.10	2004	19	12909	-63	12909	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAACTGCCAGTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	32022349	31964091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_31964348_31969401_31969491_31972741_31972802_31981083_31981231_31983657_31983754_31985979_31986076_31986805_31986846_31989825_31989921_31991601_31991718_31993884_31993967_31996341_31996429_31999653_31999780_32002200_32002322_32020880_32020959_32022289
ENSMUSG00000024887.11_31964282_32023548_1	chr19	-	1491	16	ISM	ENSMUSG00000024887.11	ENST00000329428.10	2004	19	11710	127	11710	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTACCCTGGAATCTACA	NA	NA	NA	NA	NA	NA	NA	NA	32023548	31964281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_31964348_31969401_31969491_31972741_31972802_31981083_31981231_31983657_31983754_31985979_31986076_31986805_31986846_31989825_31989921_31991601_31991718_31993884_31993967_31996341_31996429_31999653_31999780_32002200_32002322_32020880_32020959_32022289_32022418_32023484
ENSMUSG00000024887.11_31969400_32023663_1	chr19	-	1542	15	ISM	ENSMUSG00000024887.11	ENST00000329428.10	2004	19	11595	5245	11595	-5245	internal_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTCTATTGATCATT	NA	NA	NA	NA	NA	NA	NA	NA	32023663	31969399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_31969491_31972741_31972802_31981083_31981231_31983657_31983754_31985979_31986076_31986805_31986846_31989825_31989921_31991601_31991718_31993884_31993967_31996341_31996429_31999653_31999780_32002200_32002322_32020880_32020959_32022289_32022418_32023484
ENSMUSG00000024887.11_31972770_32030274_1	chr19	-	1463	15	ISM	ENSMUSG00000024887.11	ENST00000329428.10	2004	19	4984	8615	4984	-8615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACCCAAAGAATTCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	32030274	31972769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_31972802_31981083_31981231_31983657_31983754_31985979_31986076_31986805_31986846_31989825_31989921_31991601_31991718_31993884_31993967_31996341_31996429_31999653_31999780_32002200_32002322_32020880_32020959_32022289_32022418_32023484_32023662_32030232
ENSMUSG00000024887.11_31981169_32031920_1	chr19	-	1495	15	ISM	ENSMUSG00000024887.11	ENST00000329428.10	2004	19	3338	17014	3338	10637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATTCCTAATATTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	32031920	31981168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_31981231_31983657_31983754_31985979_31986076_31986805_31986846_31989825_31989921_31991601_31991718_31993884_31993967_31996341_31996429_31999653_31999780_32002200_32002322_32020880_32020959_32022289_32022418_32023484_32023662_32030232_32030383_32031879
ENSMUSG00000024887.11_31983691_32035240_1	chr19	-	1464	15	ISM	ENSMUSG00000024887.11	ENST00000329428.10	2004	19	18	19536	18	8115	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCAGAGACCTTGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	32035240	31983690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_31983754_31985979_31986076_31986805_31986846_31989825_31989921_31991601_31991718_31993884_31993967_31996341_31996429_31999653_31999780_32002200_32002322_32020880_32020959_32022289_32022418_32023484_32023662_32030232_32030383_32031879_32031941_32035196
ENSMUSG00000024889.6_4672619_4675669_1	chr19	-	1422	8	NNC	ENSMUSG00000024889.6	novel	1425	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2082	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGGAACCTTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	4675669	4672618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4673271_4673528_4673584_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220_4675324_4675460
ENSMUSG00000024889.6_4672619_4675669_2	chr19	-	1423	8	NNC	ENSMUSG00000024889.6	novel	1425	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGGAACCTTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	4675669	4672618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674719_4674792_4675040_4675125_4675220_4675324_4675460
ENSMUSG00000024889.6_4673238_4675099_1	chr19	-	411	5	ISM	ENSMUSG00000024889.6	ENSMUST00000237059.2	1227	6	299	617	246	-236	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAACTACATGGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	4675099	4673237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4673271_4673853_4673926_4674041_4674210_4674712_4674792_4675040
ENSMUSG00000024892.18_4560554_4668258_1	chr19	+	1785	13	ISM	ENSMUSG00000024892.18	ENST00000393958.7	4029	20	10	3447	10	-3447	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGGACACAACCTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	4560553	4668258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4560647_4651627_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169
ENSMUSG00000024892.18_4651934_4671160_1	chr19	+	3204	18	ISM	ENSMUSG00000024892.18	ENSMUST00000113825.4	4044	20	7560	566	186	-545	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGACAAGGTGGCTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	4651933	4671160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ENSMUSG00000024892.18_4654543_4661707_1	chr19	+	508	4	ISM	ENSMUSG00000024892.18	ENST00000628663.1	1473	10	2795	132	2795	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGTGGTTTTAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	4654542	4661707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4654612_4657559_4657723_4659891_4660075_4661614
ENSMUSG00000024892.18_4668375_4671343_1	chr19	+	1756	8	ISM	ENSMUSG00000024892.18	ENSMUST00000113825.4	4044	20	24001	383	16627	-362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTACCCCAAGCCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	4668374	4671343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ENSMUSG00000024892.18_4669009_4671558_1	chr19	+	1774	7	ISM	ENSMUSG00000024892.18	ENSMUST00000113825.4	4044	20	24635	168	17261	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGTGGGAGACCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	4669008	4671558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ENSMUSG00000024892.18_4669073_4671707_1	chr19	+	1859	7	ISM	ENSMUSG00000024892.18	ENSMUST00000113825.4	4044	20	24699	19	17325	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGTCATGTACAGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	4669072	4671707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ENSMUSG00000024896.10_32463169_32492765_1	chr19	+	2607	5	NNC	ENSMUSG00000024896.10	novel	2613	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGCACTCATTGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	32463168	32492765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_32463960_32468737_32468936_32471270_32471369_32475783_32475918_32491379
ENSMUSG00000024900.6_3402535_3414538_1	chr19	+	563	5	ISM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	29250	21195	29250	-21195	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTACTACGCCATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	3402534	3414538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477
ENSMUSG00000024900.6_3430091_3434024_1	chr19	+	556	4	ISM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	56806	1709	56806	-1709	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCAGAGATGCCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	3430090	3434024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_3430170_3431609_3431724_3431931_3432025_3433754
ENSMUSG00000024900.6_3431651_3434131_1	chr19	+	543	3	ISM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	58366	1602	58366	-1602	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGGTTGTATCAATATG	NA	NA	NA	NA	NA	NA	NA	NA	3431650	3434131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_3431724_3431931_3432025_3433754
ENSMUSG00000024901.16_4981879_4984986_1	chr19	-	1262	3	ISM	ENSMUSG00000024901.16	ENST00000618547.4	1712	5	6955	42	6955	-42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGTCCCGAATGCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	4984986	4981878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4982896_4984394_4984584_4984930
ENSMUSG00000024901.16_4981929_4985037_1	chr19	-	1263	3	ISM	ENSMUSG00000024901.16	ENST00000618547.4	1712	5	6904	92	6904	-92	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGTGGGTTACTCTATAA	NA	NA	NA	NA	NA	NA	NA	NA	4985037	4981928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4982896_4984394_4984584_4984930
ENSMUSG00000024901.16_4982062_4986178_1	chr19	-	1251	4	ISM	ENSMUSG00000024901.16	ENST00000618547.4	1712	5	5763	225	5763	-225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCTACATCATGCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	4986178	4982061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4982896_4984394_4984584_4984930_4985126_4986145
ENSMUSG00000024901.16_4982198_4991828_1	chr19	-	1238	5	FSM	ENSMUSG00000024901.16	ENST00000618547.4	1712	5	113	361	113	-361	multi-exon	FALSE	canonical	NA	NA	NA	NA	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGGCCCTCCCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	4991828	4982197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4982896_4984394_4984584_4984930_4985126_4986145_4986269_4991795
ENSMUSG00000024901.16_4982245_4991882_1	chr19	-	1245	5	FSM	ENSMUSG00000024901.16	ENST00000618547.4	1712	5	59	408	59	-408	multi-exon	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTCTGCCTGCTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	4991882	4982244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4982896_4984394_4984584_4984930_4985126_4986145_4986269_4991795
ENSMUSG00000024901.16_4982290_4991938_1	chr19	-	1256	5	FSM	ENSMUSG00000024901.16	ENST00000618547.4	1712	5	3	453	3	-453	multi-exon	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGTCCCCCATCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4991938	4982289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4982896_4984394_4984584_4984930_4985126_4986145_4986269_4991795
ENSMUSG00000024902.6_5012175_5016465_1	chr19	+	2483	5	FSM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	0	562	0	-562	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGTTTTAATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	5012174	5016465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701
ENSMUSG00000024902.6_5012358_5016599_1	chr19	+	2434	5	FSM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	183	428	-18	-428	multi-exon	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGACCTACATAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	5012357	5016599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701
ENSMUSG00000024902.6_5012402_5016648_1	chr19	+	2439	5	FSM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	227	379	26	-379	multi-exon	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGACCCTTGACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	5012401	5016648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701
ENSMUSG00000024902.6_5012917_5016810_1	chr19	+	2449	4	ISM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	742	217	541	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCCTGTTTTCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	5012916	5016810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5013003_5013353_5013448_5013533_5013694_5014701
ENSMUSG00000024902.6_5012983_5016860_1	chr19	+	2433	4	ISM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	808	167	607	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGCAGAATTGACAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	5012982	5016860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5013003_5013353_5013448_5013533_5013694_5014701
ENSMUSG00000024902.6_5013431_5017027_1	chr19	+	2503	3	ISM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	1256	0	1055	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATATATAGGTATATGT	NA	NA	NA	NA	NA	NA	NA	NA	5013430	5017027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5013448_5013533_5013694_5014701
ENSMUSG00000024906.11_5532860_5534913_1	chr19	-	755	7	ISM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	3517	0	3517	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAGGTCCTTCTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	5534913	5532859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886
ENSMUSG00000024906.11_5533028_5535129_1	chr19	-	721	8	ISM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	3301	168	3301	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCAGTTGTACTGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	5535129	5533027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066
ENSMUSG00000024906.11_5533512_5535349_1	chr19	-	701	7	ISM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	3081	652	3081	-652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGGATCGATACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	5535349	5533511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285
ENSMUSG00000024906.11_5533718_5535635_1	chr19	-	723	7	ISM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	2795	858	2795	-858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTCACTCCTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	5535635	5533717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515
ENSMUSG00000024906.11_5533984_5536121_1	chr19	-	706	7	ISM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	2309	1124	2309	-1124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGGCCTGGAAAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	5536121	5533983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056
ENSMUSG00000024906.11_5534139_5536340_1	chr19	-	692	7	ISM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	2090	1279	2090	-1279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGGGAGGACAGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	5536340	5534138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307
ENSMUSG00000024906.11_5534240_5536548_1	chr19	-	661	8	ISM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	1882	1380	1882	-1380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGGGGCACCGGGTATA	NA	NA	NA	NA	NA	NA	NA	NA	5536548	5534239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514
ENSMUSG00000024906.11_5534887_5537135_1	chr19	-	794	8	ISM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	1295	2027	1295	-2027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTTAGTCAGCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	5537135	5534886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052
ENSMUSG00000024906.11_5535067_5537806_1	chr19	-	713	8	ISM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	624	2207	624	-2207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGGGTCTTGGATAGAC	NA	NA	NA	NA	NA	NA	NA	NA	5537806	5535066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789
ENSMUSG00000024906.11_5535329_5538101_1	chr19	-	747	8	ISM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	329	2469	329	-2469	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGAGTGCTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	5538101	5535328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
ENSMUSG00000024906.11_5536079_5538294_1	chr19	-	727	6	ISM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	136	3219	136	-3219	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAACGCATCGGCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	5538294	5536078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
ENSMUSG00000024908.16_3506331_3517201_1	chr19	-	1160	5	ISM	ENSMUSG00000024908.16	ENST00000534534.5	2950	19	108519	81	77045	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCCATATGTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	3517201	3506330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140
ENSMUSG00000024908.16_3506388_3517263_1	chr19	-	1165	5	ISM	ENSMUSG00000024908.16	ENST00000534534.5	2950	19	108457	138	76983	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGGTGGAGATTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	3517263	3506387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140
ENSMUSG00000024908.16_3506734_3516601_1	chr19	-	723	4	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	77645	1416	77645	-484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGCCCATGTAATAATAGTA	NA	NA	NA	NA	NA	NA	NA	NA	3516601	3506733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3507052_3509360_3509481_3514519_3514696_3516492
ENSMUSG00000024908.16_3506734_3521101_1	chr19	-	1103	7	ISM	ENSMUSG00000024908.16	ENST00000534534.5	2950	19	104619	484	73145	-484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGCCCATGTAATAATAGTA	NA	NA	NA	NA	NA	NA	NA	NA	3521101	3506733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970
ENSMUSG00000024908.16_3506878_3517294_1	chr19	-	731	5	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	76952	1560	76952	-628	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTGTTTCTAGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	3517294	3506877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3507052_3509360_3509481_3514519_3514696_3516492_3516600_3517140
ENSMUSG00000024908.16_3506964_3534879_1	chr19	-	1162	11	ISM	ENSMUSG00000024908.16	ENST00000534534.5	2950	19	90841	714	59367	-714	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCACCACCCAGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	3534879	3506963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830
ENSMUSG00000024908.16_3506981_3519726_1	chr19	-	714	6	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	74520	1663	74520	-731	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGAGGACTGCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	3519726	3506980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3507052_3509360_3509481_3514519_3514696_3516492_3516600_3517140_3517295_3519640
ENSMUSG00000024908.16_3514520_3522033_1	chr19	-	745	6	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	72213	9202	72213	-8270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAGCTTGTCGGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	3522033	3514519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978
ENSMUSG00000024908.16_3514621_3523825_1	chr19	-	701	7	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	70421	9303	70421	-8371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGATGAATGGCGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	3523825	3514620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768
ENSMUSG00000024908.16_3514653_3542469_1	chr19	-	1168	12	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	51777	9335	51777	-8403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGCTGAGAGTACAGACA	NA	NA	NA	NA	NA	NA	NA	NA	3542469	3514652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365
ENSMUSG00000024908.16_3516534_3543956_1	chr19	-	1201	12	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	50290	11216	50290	-10284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACACCTGGTGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	3543956	3516533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885
ENSMUSG00000024908.16_3517220_3537051_1	chr19	-	730	8	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	57195	11902	57195	-10970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTGGAGCACAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	3537051	3517219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975
ENSMUSG00000024908.16_3519641_3568384_1	chr19	-	1203	11	ISM	ENSMUSG00000024908.16	ENST00000534534.5	2950	19	57336	13391	25862	-13391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCACCCTGTCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	3568384	3519640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3568244
ENSMUSG00000024908.16_3520971_3542515_1	chr19	-	788	8	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	51731	15653	51731	-14721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCACGGCTTGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	3542515	3520970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365
ENSMUSG00000024908.16_3523769_3544038_1	chr19	-	755	7	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	50208	18451	50208	-17519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATATTTTAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	3544038	3523768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885
ENSMUSG00000024908.16_3523769_3594258_1	chr19	-	1231	10	ISM	ENSMUSG00000024908.16	ENST00000534534.5	2950	19	31462	17519	-12	-17519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATATTTTAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	3594258	3523768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3568244_3568383_3571733_3571921_3594107
ENSMUSG00000024908.16_3528277_3546651_1	chr19	-	788	7	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	47595	22959	47595	-22027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCACACCTAAAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	3546651	3528276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521
ENSMUSG00000024908.16_3537016_3561979_1	chr19	-	739	7	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	32267	31698	32267	-30766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGTCCGAACAGTGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	3561979	3537015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928
ENSMUSG00000024908.16_3542447_3568323_1	chr19	-	724	7	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	25923	37129	25923	-36197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCAGTCCTTTTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	3568323	3542446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244
ENSMUSG00000024908.16_3543976_3571841_1	chr19	-	732	7	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	22405	38658	22405	-37726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTAGGTTGATATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	3571841	3543975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733
ENSMUSG00000024908.16_3546599_3576742_1	chr19	-	712	7	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	17504	41281	17504	-40349	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTAACAAGAGTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	3576742	3546598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701
ENSMUSG00000024908.16_3557319_3576883_1	chr19	-	723	6	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	17363	52001	17363	-51069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAGGAGAAGAATGAATC	NA	NA	NA	NA	NA	NA	NA	NA	3576883	3557318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701
ENSMUSG00000024908.16_3562007_3594192_1	chr19	-	744	6	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	54	56689	54	-55757	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCGCCTGAGCAGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	3594192	3562006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107
ENSMUSG00000024909.16_5524203_5528053_1	chr19	+	875	6	ISM	ENSMUSG00000024909.16	ENSMUST00000166303.9	2634	11	221	4492	-140	-3697	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCGCTCTTGTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	5524202	5528053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5524482_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954
ENSMUSG00000024909.16_5524343_5530119_1	chr19	+	935	8	ISM	ENSMUSG00000024909.16	ENSMUST00000166303.9	2634	11	361	2426	0	-1631	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTCTCCTGTCACTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	5524342	5530119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5524482_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057
ENSMUSG00000024909.16_5524775_5528071_1	chr19	+	689	6	ISM	ENSMUSG00000024909.16	ENST00000307998.11	1467	11	53	3679	-3	-3679	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGCTGTGCCAGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	5524774	5528071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5524850_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954
ENSMUSG00000024909.16_5524775_5530177_1	chr19	+	882	8	ISM	ENSMUSG00000024909.16	ENSMUST00000165485.8	1557	11	59	1704	-3	-1573	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACAGGTGCTTGGGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	5524774	5530177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5524803_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057
ENSMUSG00000024909.16_5524775_5531881_1	chr19	+	1778	10	NNC	ENSMUSG00000024909.16	novel	1781	10	NA	NA	-3	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCTGAGGTGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	5524774	5531881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527960_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ENSMUSG00000024909.16_5530293_5532150_1	chr19	+	854	3	ISM	ENSMUSG00000024909.16	ENSMUST00000236518.2	2154	9	5341	395	5341	269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTCAGGAGGAAGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5530292	5532150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5530389_5530573_5530770_5531588
ENSMUSG00000024909.16_5530333_5532239_1	chr19	+	903	3	ISM	ENSMUSG00000024909.16	ENSMUST00000236518.2	2154	9	5381	306	5381	-306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGATACTGGGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	5530332	5532239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5530389_5530573_5530770_5531588
ENSMUSG00000024909.16_5530694_5532420_1	chr19	+	908	2	ISM	ENSMUSG00000024909.16	ENSMUST00000236518.2	2154	9	5742	125	5742	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATTGACCCCATCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	5530693	5532420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5530770_5531588
ENSMUSG00000024910.6_5515557_5516173_1	chr19	-	393	3	ISM	ENSMUSG00000024910.6	ENST00000526034.2	753	6	985	0	985	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCGAGTGAAATGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	5516173	5515556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5515759_5515832_5515898_5516047
ENSMUSG00000024910.6_5515557_5516353_1	chr19	-	437	4	ISM	ENSMUSG00000024910.6	ENST00000680670.1	783	7	805	0	805	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCGAGTGAAATGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	5516353	5515556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5515704_5515828_5515898_5516047_5516174_5516258
ENSMUSG00000024910.6_5515666_5516516_1	chr19	-	414	5	ISM	ENSMUSG00000024910.6	ENST00000680670.1	783	7	642	109	642	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGGGCATGCAGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	5516516	5515665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5515704_5515828_5515898_5516047_5516174_5516258_5516340_5516416
ENSMUSG00000024910.6_5516048_5516763_1	chr19	-	459	4	ISM	ENSMUSG00000024910.6	ENST00000680670.1	783	7	395	491	395	-491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGCCAGGGTAGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	5516763	5516047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5516174_5516258_5516340_5516416_5516514_5516608
ENSMUSG00000024910.6_5516123_5517103_1	chr19	-	356	4	ISM	ENSMUSG00000024910.6	ENST00000526034.2	753	6	55	566	55	-566	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATGCCTAGCCAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	5517103	5516122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5516174_5516416_5516514_5516608_5516764_5517050
ENSMUSG00000024910.6_5516144_5517122_1	chr19	-	352	4	NNC	ENSMUSG00000024910.6	novel	753	6	NA	NA	36	-587	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGGGGGACAGAAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	5517122	5516143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_5516174_5516416_5516514_5516608_5516762_5517050
ENSMUSG00000024910.6_5516289_5517153_1	chr19	-	406	4	ISM	ENSMUSG00000024910.6	ENST00000680670.1	783	7	5	732	5	-732	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACGCATATCTAACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5517153	5516288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5516340_5516416_5516514_5516608_5516764_5517050
ENSMUSG00000024911.8_5510657_5514410_1	chr19	+	1041	9	ISM	ENSMUSG00000024911.8	ENSMUST00000025847.7	1215	10	0	667	0	-667	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCTCAGCCAGTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	5510656	5514410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513354_5513631_5513741_5513814_5513879_5514156_5514244_5514361
ENSMUSG00000024911.8_5511117_5513691_1	chr19	+	493	5	ISM	ENSMUSG00000024911.8	ENSMUST00000225141.2	1209	10	473	1388	460	-1386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAAGGTTCTCGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	5511116	5513691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631
ENSMUSG00000024911.8_5511485_5514176_1	chr19	+	488	6	ISM	ENSMUSG00000024911.8	ENSMUST00000225141.2	1209	10	841	903	828	-901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGTGGCTGCCAAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	5511484	5514176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5513879_5514156
ENSMUSG00000024911.8_5513179_5514968_1	chr19	+	528	6	ISM	ENSMUSG00000024911.8	ENSMUST00000225141.2	1209	10	2535	111	2522	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGCTACATGGGCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	5513178	5514968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5513333_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
ENSMUSG00000024912.7_5497846_5505349_1	chr19	+	968	4	FSM	ENSMUSG00000024912.7	ENSMUST00000025850.7	1864	4	271	625	-51	-211	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCTGGTGCTACTC	NA	NA	NA	NA	NA	NA	NA	NA	5497845	5505349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5498084_5500187_5500380_5504440_5504549_5504919
ENSMUSG00000024912.7_5497949_5505509_1	chr19	+	1020	4	FSM	ENSMUSG00000024912.7	ENST00000532401.1	1123	4	52	51	52	-51	multi-exon	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCACTGTTTTTCTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	5497948	5505509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5498084_5500187_5500380_5504445_5504549_5504919
ENSMUSG00000024912.7_5497949_5505720_1	chr19	+	1128	3	FSM	ENSMUSG00000024912.7	ENST00000531493.5	1180	3	52	0	52	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAGCCTAGAACACTAAC	NA	NA	NA	NA	NA	NA	NA	NA	5497948	5505720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5498084_5500187_5500380_5504919
ENSMUSG00000024912.7_5497949_5505720_2	chr19	+	1125	3	NNC	ENSMUSG00000024912.7	novel	1180	3	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAGCCTAGAACACTAAC	NA	NA	NA	NA	NA	NA	NA	NA	5497948	5505720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_5498084_5500187_5500380_5504922
ENSMUSG00000024912.7_5500185_5505565_1	chr19	+	949	3	ISM	ENSMUSG00000024912.7	ENSMUST00000025850.7	1864	4	2610	409	2288	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCCCTCTGCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	5500184	5505565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5500380_5504440_5504549_5504919
ENSMUSG00000024912.7_5504439_5505720_1	chr19	+	911	2	ISM	ENSMUSG00000024912.7	ENST00000532401.1	1123	4	6542	-160	6542	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAGCCTAGAACACTAAC	NA	NA	NA	NA	NA	NA	NA	NA	5504438	5505720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5504549_5504919
ENSMUSG00000024914.17_5472837_5475007_1	chr19	-	988	7	NNC	ENSMUSG00000024914.17	novel	992	7	NA	NA	0	2	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTTTGGTTTCTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	5475007	5472836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_5473054_5473358_5473442_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
ENSMUSG00000024921.18_26727222_26755675_1	chr19	+	1769	7	ISM	ENSMUSG00000024921.18	ENSMUST00000209085.2	1841	8	1420	0	-496	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGGTGTTGGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	26727221	26755675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_26727348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ENSMUSG00000024924.15_27207640_27215530_1	chr19	+	277	3	ISM	ENSMUSG00000024924.15	ENSMUST00000047645.13	3260	17	12883	11597	12883	-11597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGACTGTGACGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	27207639	27215530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_27207716_27212189_27212313_27215452
ENSMUSG00000024924.15_27221691_27224030_1	chr19	+	235	3	ISM	ENSMUSG00000024924.15	ENST00000680746.1	3597	18	27033	3251	26934	-3097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACACAACAGACATTCT	NA	NA	NA	NA	NA	NA	NA	NA	27221690	27224030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_27221741_27222934_27223082_27223992
ENSMUSG00000024924.15_27223021_27225276_1	chr19	+	246	4	ISM	ENSMUSG00000024924.15	ENST00000680746.1	3597	18	28363	2005	28264	-1851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGGCTACTTGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	27223020	27225276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_27223082_27223992_27224077_27224409_27224491_27225256
ENSMUSG00000024925.12_5652003_5652895_1	chr19	+	452	4	FSM	ENSMUSG00000024925.12	ENSMUST00000025864.11	1126	4	102	572	102	-572	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGTCACAGATCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	5652002	5652895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5652109_5652220_5652403_5652477_5652598_5652851
ENSMUSG00000024925.12_5652263_5653032_1	chr19	+	441	3	ISM	ENSMUSG00000024925.12	ENSMUST00000025864.11	1126	4	362	435	362	-435	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATAGCTCTGCCTATAT	NA	NA	NA	NA	NA	NA	NA	NA	5652262	5653032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5652403_5652477_5652598_5652851
ENSMUSG00000024925.12_5652555_5653279_1	chr19	+	471	2	ISM	ENSMUSG00000024925.12	ENSMUST00000025864.11	1126	4	654	188	654	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGGCACTGGCCACTA	NA	NA	NA	NA	NA	NA	NA	NA	5652554	5653279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5652598_5652851
ENSMUSG00000024926.11_5653044_5659946_1	chr19	-	1776	12	FSM	ENSMUSG00000024926.11	ENSMUST00000235701.2	1905	12	130	-1	111	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	5659946	5653043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879
ENSMUSG00000024926.11_5655429_5660156_1	chr19	-	1235	11	ISM	ENSMUSG00000024926.11	ENSMUST00000113641.4	2154	14	109	2387	-80	-1983	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTATGGCAAGCTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	5660156	5655428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ENSMUSG00000024927.9_5687511_5698158_1	chr19	+	2709	11	NNC	ENSMUSG00000024927.9	novel	2716	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	891	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAGTAGCTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	5687510	5698158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_5687870_5688459_5688487_5688578_5688731_5688882_5689032_5689893_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
ENSMUSG00000024927.9_5687511_5698158_3	chr19	+	2708	11	NNC	ENSMUSG00000024927.9	novel	2716	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAGTAGCTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	5687510	5698158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_5687870_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696835
ENSMUSG00000024935.12_28856474_28874973_1	chr19	+	398	5	ISM	ENSMUSG00000024935.12	ENST00000262352.8	3320	12	51	16379	51	-16379	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACCACAGCCATGACAACA	NA	NA	NA	NA	NA	NA	NA	NA	28856473	28874973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906
ENSMUSG00000024935.12_28870258_28878936_1	chr19	+	419	5	ISM	ENSMUSG00000024935.12	ENST00000262352.8	3320	12	13835	12416	13835	-12416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGAAAATGGGAGAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	28870257	28878936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841
ENSMUSG00000024935.12_28890199_28890784_1	chr19	+	383	2	ISM	ENSMUSG00000024935.12	ENST00000262352.8	3320	12	33776	568	33776	-568	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGAATCTCAGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	28890198	28890784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_28890486_28890688
ENSMUSG00000024935.12_28890390_28890989_1	chr19	+	397	2	ISM	ENSMUSG00000024935.12	ENST00000262352.8	3320	12	33967	363	33967	-363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGCCAGAAATCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	28890389	28890989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_28890486_28890688
ENSMUSG00000024935.12_28890443_28891052_1	chr19	+	407	2	ISM	ENSMUSG00000024935.12	ENST00000262352.8	3320	12	34020	300	34020	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACCTGAAAGCTACCGAC	NA	NA	NA	NA	NA	NA	NA	NA	28890442	28891052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_28890486_28890688
ENSMUSG00000024937.16_5758354_5766043_1	chr19	-	859	8	ISM	ENSMUSG00000024937.16	ENSMUST00000236215.2	3160	19	10255	276	10255	-271	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCCTGTCTGGTTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	5766043	5758353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823
ENSMUSG00000024937.16_5766228_5771760_1	chr19	-	821	7	ISM	ENSMUSG00000024937.16	ENSMUST00000235730.2	2815	18	4543	8145	4538	-8145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGGACTGGGGCAATACCA	NA	NA	NA	NA	NA	NA	NA	NA	5771760	5766227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5766523_5766923_5766973_5767066_5767225_5770713_5770755_5770836_5770906_5771469_5771613_5771694
ENSMUSG00000024937.16_5766292_5771838_1	chr19	-	835	7	ISM	ENSMUSG00000024937.16	ENSMUST00000235730.2	2815	18	4465	8209	4460	-8209	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCGCAGCGATTACGCGA	NA	NA	NA	NA	NA	NA	NA	NA	5771838	5766291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5766523_5766923_5766973_5767066_5767225_5770713_5770755_5770836_5770906_5771469_5771613_5771694
ENSMUSG00000024937.16_5767112_5776011_1	chr19	-	820	9	ISM	ENSMUSG00000024937.16	ENSMUST00000235730.2	2815	18	292	9029	287	-9029	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCCTTCTGTGCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	5776011	5767111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5767225_5770713_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
ENSMUSG00000024939.7_5778115_5779421_1	chr19	-	949	2	FSM	ENSMUSG00000024939.7	ENSMUST00000116558.3	1189	2	240	0	240	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	5779421	5778114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5778907_5779264
ENSMUSG00000024939.7_5778115_5779528_1	chr19	-	1056	2	FSM	ENSMUSG00000024939.7	ENSMUST00000116558.3	1189	2	133	0	133	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	5779528	5778114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5778907_5779264
ENSMUSG00000024939.7_5778115_5779552_1	chr19	-	1031	2	FSM	ENSMUSG00000024939.7	ENSMUST00000161368.2	1160	2	129	0	109	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	5779552	5778114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5778858_5779264
ENSMUSG00000024939.7_5778276_5779661_1	chr19	-	1028	2	FSM	ENSMUSG00000024939.7	ENSMUST00000116558.3	1189	2	0	161	0	-161	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATCCCTACCAGTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	5779661	5778275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5778907_5779264
ENSMUSG00000024940.12_5801034_5801833_1	chr19	+	382	4	ISM	ENSMUSG00000024940.12	ENST00000532932.5	2202	17	67	6287	67	-6287	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCTGGCAGCTTCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	5801033	5801833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5801103_5801199_5801332_5801426_5801556_5801781
ENSMUSG00000024940.12_5801071_5801904_1	chr19	+	416	4	ISM	ENSMUSG00000024940.12	ENST00000532932.5	2202	17	104	6216	104	-6216	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGCGGATCTGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	5801070	5801904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5801103_5801199_5801332_5801426_5801556_5801781
ENSMUSG00000024940.12_5801277_5802101_1	chr19	+	362	4	ISM	ENSMUSG00000024940.12	ENST00000532932.5	2202	17	310	6019	310	-6019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTTCTTACCGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	5801276	5802101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5801332_5801426_5801556_5801781_5801905_5802046
ENSMUSG00000024940.12_5801833_5804017_1	chr19	+	379	4	ISM	ENSMUSG00000024940.12	ENST00000532932.5	2202	17	866	4103	866	-4103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTACAGATGTCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5801832	5804017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5801905_5802046_5802170_5803660_5803784_5803956
ENSMUSG00000024940.12_5802108_5805649_1	chr19	+	381	4	ISM	ENSMUSG00000024940.12	ENST00000532932.5	2202	17	1141	2471	1141	-2471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGTGATGAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	5802107	5805649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5802170_5803660_5803784_5803956_5804077_5805573
ENSMUSG00000024940.12_5803712_5806018_1	chr19	+	380	4	ISM	ENSMUSG00000024940.12	ENST00000530785.5	1561	12	53	2102	53	-2102	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACAGCGTATTGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	5803711	5806018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5803784_5803956_5804077_5805573_5805703_5805959
ENSMUSG00000024940.12_5803730_5806668_1	chr19	+	612	6	ISM	ENSMUSG00000024940.12	ENST00000530785.5	1561	12	71	1452	71	-1452	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGCAGCCCGGCTACGAG	NA	NA	NA	NA	NA	NA	NA	NA	5803729	5806668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5803784_5803956_5804077_5805573_5805703_5805959_5806128_5806274_5806359_5806611
ENSMUSG00000024940.12_5804026_5806878_1	chr19	+	618	6	ISM	ENSMUSG00000024940.12	ENST00000530785.5	1561	12	367	1242	367	-1242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCGGCTACCGCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	5804025	5806878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5804077_5805573_5805703_5805959_5806128_5806274_5806359_5806611_5806741_5806821
ENSMUSG00000024940.12_5805644_5807112_1	chr19	+	628	6	ISM	ENSMUSG00000024940.12	ENST00000530785.5	1561	12	1985	1008	1985	-1008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCCCGGGCTCCTACCG	NA	NA	NA	NA	NA	NA	NA	NA	5805643	5807112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5805703_5805959_5806128_5806274_5806359_5806611_5806741_5806821_5806960_5807062
ENSMUSG00000024940.12_5806059_5807365_1	chr19	+	588	6	ISM	ENSMUSG00000024940.12	ENST00000530785.5	1561	12	2400	755	2400	-755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGGCCAGCGAGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	5806058	5807365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5806128_5806274_5806359_5806611_5806741_5806821_5806960_5807062_5807204_5807338
ENSMUSG00000024940.12_5806059_5807500_1	chr19	+	723	6	ISM	ENSMUSG00000024940.12	ENST00000530785.5	1561	12	2400	620	2400	-620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCTACCCCTGAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	5806058	5807500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5806128_5806274_5806359_5806611_5806741_5806821_5806960_5807062_5807204_5807338
ENSMUSG00000024940.12_5806687_5807798_1	chr19	+	636	6	ISM	ENSMUSG00000024940.12	ENST00000530785.5	1561	12	3028	322	3028	-322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGCCAGGCGGGGCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	5806686	5807798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5806741_5806821_5806960_5807062_5807204_5807338_5807501_5807574_5807656_5807738
ENSMUSG00000024940.12_5806822_5808016_1	chr19	+	702	6	ISM	ENSMUSG00000024940.12	ENST00000530785.5	1561	12	3163	104	3163	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGCGGTGCGTGAACACC	NA	NA	NA	NA	NA	NA	NA	NA	5806821	5808016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5806960_5807062_5807204_5807338_5807501_5807574_5807656_5807738_5807871_5807968
ENSMUSG00000024941.10_5808455_5811836_1	chr19	-	1336	9	ISM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	9611	76	9592	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	5811836	5808454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680
ENSMUSG00000024941.10_5808587_5809361_1	chr19	-	408	3	ISM	ENSMUSG00000024941.10	ENST00000525364.5	2572	16	12067	132	12067	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCACTGGGCTTCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	5809361	5808586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5808725_5808967_5809175_5809298
ENSMUSG00000024941.10_5808691_5815445_1	chr19	-	1322	11	ISM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	6002	312	5983	-236	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGGAAAGGAGAAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	5815445	5808690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337
ENSMUSG00000024941.10_5809070_5816320_1	chr19	-	1260	10	ISM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	5127	691	5108	-615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAAGGCACTCGGCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	5816320	5809069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185
ENSMUSG00000024941.10_5809136_5819542_1	chr19	-	1264	11	ISM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	1905	757	1886	-681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCTGGGAAGTTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	5819542	5809135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496
ENSMUSG00000024941.10_5809303_5819652_1	chr19	-	1331	10	ISM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	1795	924	1776	-848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTGGGCTGGGTCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	5819652	5809302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496
ENSMUSG00000024941.10_5809693_5819839_1	chr19	-	1354	10	ISM	ENSMUSG00000024941.10	ENST00000525364.5	2572	16	1589	1238	1589	-1238	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCAGGGCCGAGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	5819839	5809692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748
ENSMUSG00000024942.20_6038757_6061112_1	chr19	-	2084	16	NIC	ENSMUSG00000024942.20	novel	2115	19	NA	NA	3386	-183	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCCCGAGGGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	6061112	6038756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044
ENSMUSG00000024942.20_6038888_6061366_1	chr19	-	2094	17	NIC	ENSMUSG00000024942.20	novel	2115	19	NA	NA	3132	-314	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGAAGGCCTCACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	6061366	6038887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326
ENSMUSG00000024942.20_6039081_6063711_1	chr19	-	2088	18	NIC	ENSMUSG00000024942.20	novel	2115	19	NA	NA	787	-507	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCGGGGCAGGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	6063711	6039080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618
ENSMUSG00000024942.20_6039262_6064317_1	chr19	-	2090	20	NIC	ENSMUSG00000024942.20	novel	2203	20	NA	NA	181	-688	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGGAAGGAAGGCACCC	NA	NA	NA	NA	NA	NA	NA	NA	6064317	6039261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230
ENSMUSG00000024942.20_6039324_6064379_1	chr19	-	2090	20	NIC	ENSMUSG00000024942.20	novel	2203	20	NA	NA	119	698	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAAGCCACGCCTCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	6064379	6039323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230
ENSMUSG00000024942.20_6039375_6064447_1	chr19	-	2107	20	NIC	ENSMUSG00000024942.20	novel	2203	20	NA	NA	51	647	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCAGTTGCCTTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	6064447	6039374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230
ENSMUSG00000024942.20_6040022_6044917_1	chr19	-	762	9	ISM	ENSMUSG00000024942.20	ENST00000533129.5	2115	19	19581	0	19581	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGATAATCCCCCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	6044917	6040021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708
ENSMUSG00000024942.20_6040022_6064498_1	chr19	-	2115	19	FSM	ENSMUSG00000024942.20	ENST00000533129.5	2115	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGATAATCCCCCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	6064498	6040021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230
ENSMUSG00000024942.20_6043904_6065236_1	chr19	-	1827	15	ISM	ENSMUSG00000024942.20	ENST00000279247.11	2203	20	-13	3882	0	-3882	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGACCCCCACCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	6065236	6043903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065135
ENSMUSG00000024942.20_6044862_6061135_1	chr19	-	740	7	ISM	ENSMUSG00000024942.20	ENST00000533129.5	2115	19	3363	4840	3363	-4840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGCAGTCAGAGCACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	6061135	6044861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044
ENSMUSG00000024942.20_6047794_6061419_1	chr19	-	771	7	ISM	ENSMUSG00000024942.20	ENST00000533129.5	2115	19	3079	7772	3079	-7772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAGAAACACCGCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	6061419	6047793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326
ENSMUSG00000024942.20_6057282_6063737_1	chr19	-	828	7	ISM	ENSMUSG00000024942.20	ENST00000533129.5	2115	19	761	17260	761	-17260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGTTGGGAGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	6063737	6057281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618
ENSMUSG00000024943.10_23211351_23241083_1	chr19	-	1355	10	ISM	ENSMUSG00000024943.10	ENSMUST00000226111.2	3265	24	8880	25252	8880	-25252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACCCGAGAAAGAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	23241083	23211350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967
ENSMUSG00000024944.7_6184416_6191436_1	chr19	-	1141	5	FSM	ENSMUSG00000024944.7	ENSMUST00000025893.7	1286	5	142	3	142	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGGCTGAGCCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	6191436	6184415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6184832_6186008_6186090_6187507_6187671_6187759_6187871_6191066
ENSMUSG00000024947.18_6385141_6390813_1	chr19	+	2797	9	FSM	ENSMUSG00000024947.18	ENSMUST00000056391.15	2975	9	72	106	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGGAAATCTGCACGGG	NA	NA	NA	NA	NA	NA	NA	NA	6385140	6390813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ENSMUSG00000024949.18_6413993_6424092_1	chr19	+	1246	10	ISM	ENSMUSG00000024949.18	ENSMUST00000113488.8	2282	14	153	2450	41	-2450	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAATCGGCCCTACCATG	NA	NA	NA	NA	NA	NA	NA	NA	6413992	6424092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039
ENSMUSG00000024949.18_6414093_6422649_1	chr19	+	1158	8	ISM	ENSMUSG00000024949.18	ENST00000377387.5	2813	13	46	4584	46	-3893	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGGTGAGGCCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	6414092	6422649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6414401_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547
ENSMUSG00000024949.18_6414224_6423783_1	chr19	+	1214	9	ISM	ENSMUSG00000024949.18	ENST00000377387.5	2813	13	177	3450	177	-2759	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCCTGGGACAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	6414223	6423783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6414401_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602
ENSMUSG00000024949.18_6414343_6424096_1	chr19	+	1152	10	ISM	ENSMUSG00000024949.18	ENST00000377387.5	2813	13	296	3137	296	-2446	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGGCCCTACCATGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	6414342	6424096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6414401_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039
ENSMUSG00000024949.18_6414382_6424163_1	chr19	+	1180	10	ISM	ENSMUSG00000024949.18	ENST00000377387.5	2813	13	335	3070	335	-2379	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACCCATTACCCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6414381	6424163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6414401_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039
ENSMUSG00000024949.18_6418392_6424313_1	chr19	+	1184	8	ISM	ENSMUSG00000024949.18	ENSMUST00000113488.8	2282	14	4552	2229	4345	-2229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAGTGTCAGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	6418391	6424313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039
ENSMUSG00000024949.18_6418392_6424638_1	chr19	+	1244	9	ISM	ENSMUSG00000024949.18	ENSMUST00000113488.8	2282	14	4552	1904	4345	-1904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGCTGCTTACTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	6418391	6424638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578
ENSMUSG00000024949.18_6421297_6424784_1	chr19	+	1202	9	ISM	ENSMUSG00000024949.18	ENSMUST00000113488.8	2282	14	7457	1758	7250	-1758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTCCGCCACCTCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	6421296	6424784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748
ENSMUSG00000024949.18_6421352_6424833_1	chr19	+	1196	9	ISM	ENSMUSG00000024949.18	ENSMUST00000113488.8	2282	14	7512	1709	7305	-1709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTCCATGGCAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	6421351	6424833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748
ENSMUSG00000024949.18_6421418_6424870_1	chr19	+	1167	9	ISM	ENSMUSG00000024949.18	ENSMUST00000113488.8	2282	14	7578	1672	7371	-1672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCCCTCCGCCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	6421417	6424870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748
ENSMUSG00000024949.18_6421696_6426388_1	chr19	+	1212	9	ISM	ENSMUSG00000024949.18	ENSMUST00000113489.8	2863	13	7947	845	7649	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCTTCCAGGCAGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	6421695	6426388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6426325
ENSMUSG00000024949.18_6422092_6426542_1	chr19	+	1287	8	ISM	ENSMUSG00000024949.18	ENSMUST00000113489.8	2863	13	8343	691	8045	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTCCTTTCTTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	6422091	6426542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6426325
ENSMUSG00000024949.18_6422165_6426542_1	chr19	+	1214	8	ISM	ENSMUSG00000024949.18	ENSMUST00000113489.8	2863	13	8416	691	8118	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTCCTTTCTTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	6422164	6426542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6426325
ENSMUSG00000024949.18_6422443_6426684_1	chr19	+	1170	7	ISM	ENSMUSG00000024949.18	ENSMUST00000113489.8	2863	13	8694	549	8396	142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCTTGGTGGTGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	6422442	6426684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6426325
ENSMUSG00000024949.18_6423651_6426824_1	chr19	+	1150	5	ISM	ENSMUSG00000024949.18	ENSMUST00000113489.8	2863	13	9902	409	9604	282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCAGTGGGATTCACA	NA	NA	NA	NA	NA	NA	NA	NA	6423650	6426824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6426325
ENSMUSG00000024949.18_6424040_6427005_1	chr19	+	1198	4	ISM	ENSMUSG00000024949.18	ENSMUST00000113489.8	2863	13	10291	228	9993	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGTTTTGCAGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	6424039	6427005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6424318_6424578_6424639_6424748_6424929_6426325
ENSMUSG00000024949.18_6424159_6427121_1	chr19	+	1195	4	ISM	ENSMUSG00000024949.18	ENSMUST00000113489.8	2863	13	10410	112	10112	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGGTTTATCTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	6424158	6427121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6424318_6424578_6424639_6424748_6424929_6426325
ENSMUSG00000024949.18_6424159_6427226_1	chr19	+	1300	4	ISM	ENSMUSG00000024949.18	ENSMUST00000113489.8	2863	13	10410	7	10112	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	6424158	6427226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6424318_6424578_6424639_6424748_6424929_6426325
ENSMUSG00000024953.18_6884074_6887398_2	chr19	-	1179	6	NNC	ENSMUSG00000024953.18	novel	1262	6	NA	NA	76	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTACAGGGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	6887398	6884073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885478_6886826
ENSMUSG00000024953.18_6884074_6887474_1	chr19	-	1255	6	NNC	ENSMUSG00000024953.18	novel	1262	6	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	4508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTACAGGGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	6887474	6884073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_6884320_6884433_6884489_6884609_6884649_6884909_6885042_6885349_6885485_6886826
ENSMUSG00000024953.18_6884074_6887474_2	chr19	-	1254	6	NNC	ENSMUSG00000024953.18	novel	1262	6	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	4179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTACAGGGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	6887474	6884073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885357_6885485_6886826
ENSMUSG00000024955.16_6888345_6891205_1	chr19	-	1490	4	ISM	ENSMUSG00000024955.16	ENST00000400596.2	1262	6	6562	-774	6562	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTGGTCGGTGAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	6891205	6888344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187
ENSMUSG00000024955.16_6888534_6891477_1	chr19	-	1443	5	ISM	ENSMUSG00000024955.16	ENST00000405666.5	2296	7	7149	186	6290	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTGCAGAGCAATAACACT	NA	NA	NA	NA	NA	NA	NA	NA	6891477	6888533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446
ENSMUSG00000024955.16_6888695_6897499_1	chr19	-	1437	6	ISM	ENSMUSG00000024955.16	ENST00000405666.5	2296	7	1127	347	268	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGCCCCGTCCCTTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	6897499	6888694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891564_6897430
ENSMUSG00000024955.16_6888761_6897561_1	chr19	-	1433	6	ISM	ENSMUSG00000024955.16	ENST00000405666.5	2296	7	1065	413	206	358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTGATGCTTTTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	6897561	6888760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891564_6897430
ENSMUSG00000024955.16_6888812_6897615_1	chr19	-	1436	6	ISM	ENSMUSG00000024955.16	ENST00000405666.5	2296	7	1011	464	152	307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGACACTGATCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	6897615	6888811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891564_6897430
ENSMUSG00000024955.16_6888994_6898454_1	chr19	-	1478	7	FSM	ENSMUSG00000024955.16	ENST00000405666.5	2296	7	172	646	172	125	multi-exon	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCCCTGGGAGAAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	6898454	6888993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891564_6897430_6897768_6898382
ENSMUSG00000024955.16_6889068_6898487_1	chr19	-	1437	7	FSM	ENSMUSG00000024955.16	ENST00000405666.5	2296	7	139	720	139	51	multi-exon	FALSE	canonical	NA	NA	NA	NA	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTAGCCCCAAAGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	6898487	6889067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891564_6897430_6897768_6898382
ENSMUSG00000024955.16_6889119_6897729_1	chr19	-	1224	6	FSM	ENSMUSG00000024955.16	ENST00000400596.2	1262	6	38	0	38	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGGGGTGGGACAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	6897729	6889118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891465_6891564_6897430
ENSMUSG00000024955.16_6889119_6897729_2	chr19	-	1218	6	NNC	ENSMUSG00000024955.16	novel	1262	6	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGGGGTGGGACAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	6897729	6889118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_6889379_6889722_6889993_6890083_6890246_6891187_6891317_6891465_6891564_6897430
ENSMUSG00000024955.16_6889130_6898559_1	chr19	-	1447	7	FSM	ENSMUSG00000024955.16	ENST00000405666.5	2296	7	67	782	67	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGACTGAGGCAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	6898559	6889129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891564_6897430_6897768_6898382
ENSMUSG00000024958.14_6915438_6916449_1	chr19	-	543	3	ISM	ENSMUSG00000024958.14	ENST00000313074.7	1462	7	1839	-4	1758	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCCTGTCACTCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	6916449	6915437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6915792_6916123_6916243_6916379
ENSMUSG00000024958.14_6915700_6916942_1	chr19	-	492	4	ISM	ENSMUSG00000024958.14	ENST00000377702.8	1355	6	1283	258	1265	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGATCCCTGGCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6916942	6915699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6915898_6916123_6916243_6916379_6916509_6916896
ENSMUSG00000024958.14_6915700_6916945_1	chr19	-	539	5	ISM	ENSMUSG00000024958.14	ENST00000313074.7	1462	7	1343	258	1262	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGATCCCTGGCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6916945	6915699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6915792_6916123_6916243_6916379_6916509_6916628_6916779_6916896
ENSMUSG00000024958.14_6915803_6916990_1	chr19	-	437	4	ISM	ENSMUSG00000024958.14	ENST00000377702.8	1355	6	1235	361	1217	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCCCAGGTGCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	6916990	6915802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6915898_6916123_6916243_6916379_6916509_6916896
ENSMUSG00000024958.14_6915844_6917058_1	chr19	-	464	4	ISM	ENSMUSG00000024958.14	ENST00000377702.8	1355	6	1167	402	1149	-314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGGGAGGGGCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	6917058	6915843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6915898_6916123_6916243_6916379_6916509_6916896
ENSMUSG00000024958.14_6916173_6917006_1	chr19	-	459	4	ISM	ENSMUSG00000024958.14	ENST00000313074.7	1462	7	1282	731	1201	-643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGATGAGGGCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	6917006	6916172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6916243_6916379_6916509_6916628_6916779_6916896
ENSMUSG00000024958.14_6916380_6917769_1	chr19	-	555	4	ISM	ENSMUSG00000024958.14	ENST00000539851.5	1385	6	455	938	438	-850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGACCCCCCCCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	6917769	6916379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6916509_6916628_6916779_6916896_6917123_6917719
ENSMUSG00000024958.14_6916380_6917890_1	chr19	-	445	4	ISM	ENSMUSG00000024958.14	ENST00000377702.8	1355	6	335	938	317	-850	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGACCCCCCCCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	6917890	6916379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6916509_6916896_6917123_6917719_6917770_6917850
ENSMUSG00000024958.14_6916628_6917890_1	chr19	-	467	4	ISM	ENSMUSG00000024958.14	ENST00000539851.5	1385	6	334	1186	317	-1098	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCATTGGTCCTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	6917890	6916627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6916779_6916896_6917123_6917719_6917770_6917850
ENSMUSG00000024958.14_6916953_6918177_1	chr19	-	547	3	ISM	ENSMUSG00000024958.14	ENST00000539851.5	1385	6	47	1511	30	-1423	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCCTTGTGGCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	6918177	6916952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6917123_6917719_6917770_6917850
ENSMUSG00000024958.14_6917719_6919937_1	chr19	-	501	3	ISM	ENSMUSG00000024958.14	ENST00000411458.5	1492	9	335	2189	-119	-2189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTACTGGAGATGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	6919937	6917718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6917770_6917850_6918223_6919859
ENSMUSG00000024958.14_6917890_6920239_1	chr19	-	484	3	ISM	ENSMUSG00000024958.14	ENST00000411458.5	1492	9	33	2360	33	-2360	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCACACTGACGCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	6920239	6917889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6918223_6919859_6919936_6920164
ENSMUSG00000024959.15_6919229_6929118_1	chr19	+	1303	4	FSM	ENSMUSG00000024959.15	ENSMUST00000025910.13	1452	4	0	149	0	-139	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGGAAGTGGCTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	6919228	6929118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6919809_6920234_6920415_6928007_6928199_6928766
ENSMUSG00000024959.15_6919337_6929242_1	chr19	+	1319	4	FSM	ENSMUSG00000024959.15	ENSMUST00000025910.13	1452	4	108	25	108	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGCGCATGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	6919336	6929242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6919809_6920234_6920415_6928007_6928199_6928766
ENSMUSG00000024959.15_6919464_6929267_1	chr19	+	1217	4	FSM	ENSMUSG00000024959.15	ENSMUST00000025910.13	1452	4	235	0	-227	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTATCCTTCGTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	6919463	6929267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6919809_6920234_6920415_6928007_6928199_6928766
ENSMUSG00000024959.15_6919890_6929261_1	chr19	+	964	4	NNC	ENSMUSG00000024959.15	novel	990	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGCCTCTATCCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	6919889	6929261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_6919993_6920239_6920415_6928007_6928199_6928766
ENSMUSG00000024959.15_6919890_6929261_2	chr19	+	963	4	NNC	ENSMUSG00000024959.15	novel	990	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGCCTCTATCCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	6919889	6929261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_6919993_6920234_6920415_6928013_6928199_6928766
ENSMUSG00000024960.10_6931082_6941887_1	chr19	-	3222	22	ISM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	5295	1	5239	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	6941887	6931081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740
ENSMUSG00000024960.10_6931227_6942040_1	chr19	-	3153	23	ISM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	5142	146	5086	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTAAGATAGGTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	6942040	6931226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964
ENSMUSG00000024960.10_6931285_6942097_1	chr19	-	3152	23	ISM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	5085	204	5029	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCCCTTCTAACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	6942097	6931284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964
ENSMUSG00000024960.10_6931453_6943100_1	chr19	-	3242	26	ISM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	4082	372	4026	-372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGTGGCCACAAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	6943100	6931452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053
ENSMUSG00000024960.10_6931606_6943226_1	chr19	-	3134	27	ISM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	3956	525	3900	-525	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTGCCTGCTGGGCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	6943226	6931605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188
ENSMUSG00000024960.10_6931795_6943582_1	chr19	-	3140	27	ISM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	3600	714	3544	-714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCAACAGCAAGTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	6943582	6931794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510
ENSMUSG00000024960.10_6932215_6943796_1	chr19	-	3147	26	ISM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	3386	1134	3330	-1134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGTGTAAGTGTGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	6943796	6932214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753
ENSMUSG00000024960.10_6933081_6947182_1	chr19	-	3208	25	ISM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	0	2000	0	-2000	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCCCTGCAGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	6947182	6933080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ENSMUSG00000024966.10_6998070_7009979_1	chr19	-	1488	10	ISM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	7356	0	7356	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	7009979	6998069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848
ENSMUSG00000024966.10_6998264_7011581_1	chr19	-	1383	11	ISM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	5754	194	5754	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1032	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCTGCCCAGTCCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	7011581	6998263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530
ENSMUSG00000024966.10_6998315_7011631_1	chr19	-	1382	11	ISM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	5704	245	5704	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1045	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCCAGCACACGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	7011631	6998314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530
ENSMUSG00000024966.10_6998456_7012118_1	chr19	-	1386	12	ISM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	5217	386	5217	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCTCTTCCCTTCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	7012118	6998455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014
ENSMUSG00000024966.10_6998526_7012924_1	chr19	-	1415	13	ISM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	4411	456	4411	-456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAATAGCGCAGAAGATC	NA	NA	NA	NA	NA	NA	NA	NA	7012924	6998525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863
ENSMUSG00000024966.10_6999018_7012953_1	chr19	-	1430	12	ISM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	4382	948	4382	-948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1092	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGAGTGGGGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	7012953	6999017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863
ENSMUSG00000024966.10_6999168_7013073_1	chr19	-	1400	12	ISM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	4262	1098	4262	-1098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATGATGGCACAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	7013073	6999167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863
ENSMUSG00000024966.10_6999389_7017335_1	chr19	-	1471	12	ISM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	0	1319	0	-1319	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTTGGCCTATAACATA	NA	NA	NA	NA	NA	NA	NA	NA	7017335	6999388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ENSMUSG00000024969.16_7252761_7261911_1	chr19	-	3033	9	ISM	ENSMUSG00000024969.16	ENST00000402010.8	4453	19	57076	0	10901	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	7261911	7252760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829
ENSMUSG00000024969.16_7252906_7262143_1	chr19	-	3038	10	ISM	ENSMUSG00000024969.16	ENST00000402010.8	4453	19	56844	145	10669	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGCTTGGCTCCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	7262143	7252905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024
ENSMUSG00000024969.16_7252965_7262143_1	chr19	-	2979	10	ISM	ENSMUSG00000024969.16	ENST00000402010.8	4453	19	56844	204	10669	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTCCTCTCCCCTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	7262143	7252964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024
ENSMUSG00000024969.16_7253056_7262341_1	chr19	-	2976	11	NNC	ENSMUSG00000024969.16	novel	4453	19	NA	NA	10471	-295	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAGCAACACATTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	7262341	7253055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258616_7259158_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233
ENSMUSG00000024969.16_7253157_7263156_1	chr19	-	2948	12	ISM	ENSMUSG00000024969.16	ENST00000402010.8	4453	19	55831	396	9656	-396	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTGTTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	7263156	7253156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096
ENSMUSG00000024969.16_7253167_7263173_1	chr19	-	2954	12	NNC	ENSMUSG00000024969.16	novel	4453	19	NA	NA	9639	-406	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTTGGTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	7263173	7253166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258616_7259158_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096
ENSMUSG00000024969.16_7253213_7263214_1	chr19	-	2950	12	ISM	ENSMUSG00000024969.16	ENST00000402010.8	4453	19	55773	452	9598	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACATTTTTTTTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	7263214	7253212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096
ENSMUSG00000024969.16_7253238_7263231_1	chr19	-	2941	12	NNC	ENSMUSG00000024969.16	novel	4453	19	NA	NA	9581	-477	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGCCCCTGCCCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	7263231	7253237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258616_7259158_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096
ENSMUSG00000024969.16_7253298_7263306_1	chr19	-	2956	12	NNC	ENSMUSG00000024969.16	novel	4453	19	NA	NA	9506	-537	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCCTTAATTTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	7263306	7253297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258616_7259158_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096
ENSMUSG00000024969.16_7253474_7264381_1	chr19	-	2952	15	ISM	ENSMUSG00000024969.16	ENST00000402010.8	4453	19	54606	713	8431	624	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTCAGGAGACTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	7264381	7253473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365
ENSMUSG00000024969.16_7253670_7268043_1	chr19	-	2985	18	ISM	ENSMUSG00000024969.16	ENST00000402010.8	4453	19	50944	909	4769	428	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGAGGGGAATGGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	7268043	7253669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967
ENSMUSG00000024969.16_7253678_7268007_1	chr19	-	2941	18	ISM	ENSMUSG00000024969.16	ENST00000402010.8	4453	19	50980	917	4805	420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGTAGAGGGGAGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	7268007	7253677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967
ENSMUSG00000024969.16_7253725_7268062_1	chr19	-	2949	18	ISM	ENSMUSG00000024969.16	ENST00000402010.8	4453	19	50925	964	4750	373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTCTCAGAAGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	7268062	7253724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967
ENSMUSG00000024969.16_7253748_7268125_1	chr19	-	2989	18	ISM	ENSMUSG00000024969.16	ENST00000402010.8	4453	19	50862	987	4687	350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGCTGCTGTGGGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	7268125	7253747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967
ENSMUSG00000024969.16_7253760_7268131_1	chr19	-	2983	18	ISM	ENSMUSG00000024969.16	ENST00000402010.8	4453	19	50856	999	4681	338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTCCTTCCATGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	7268131	7253759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967
ENSMUSG00000024969.16_7254098_7318798_2	chr19	-	2927	19	FSM	ENSMUSG00000024969.16	ENST00000402010.8	4453	19	189	1337	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	7318798	7254097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ENSMUSG00000024969.16_7254214_7318953_2	chr19	-	2966	19	FSM	ENSMUSG00000024969.16	ENST00000402010.8	4453	19	34	1453	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGAGGGGGCTGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	7318953	7254213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ENSMUSG00000024972.17_7575362_7581469_1	chr19	-	724	5	NNC	ENSMUSG00000024972.17	novel	906	7	NA	NA	297	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGGAGGGGCGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	7581469	7575361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_7575537_7576124_7576276_7578012_7578122_7580340_7580494_7581333
ENSMUSG00000024972.17_7575362_7584468_1	chr19	-	1339	8	FSM	ENSMUSG00000024972.17	ENST00000674247.1	1328	8	-11	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGGAGGGGCGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	7584468	7575361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_7575537_7576124_7576276_7578012_7578122_7579407_7579447_7580373_7580494_7581333_7581548_7581668_7581758_7584026
ENSMUSG00000024972.17_7575362_7584468_2	chr19	-	1333	8	NNC	ENSMUSG00000024972.17	novel	1328	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1967	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGGAGGGGCGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	7584468	7575361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_7575537_7576124_7576276_7578012_7578122_7579407_7579447_7580373_7580494_7581339_7581548_7581668_7581758_7584026
ENSMUSG00000024972.17_7575362_7584468_3	chr19	-	1334	8	NNC	ENSMUSG00000024972.17	novel	1328	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGGAGGGGCGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	7584468	7575361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_7575537_7576124_7576276_7578012_7578122_7579407_7579447_7580373_7580489_7581333_7581548_7581668_7581758_7584026
ENSMUSG00000024972.17_7575464_7581722_1	chr19	-	759	7	NNC	ENSMUSG00000024972.17	novel	906	7	NA	NA	44	-102	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAAAGCCCTGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	7581722	7575463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_7575537_7576124_7576276_7578012_7578122_7579407_7579447_7580373_7580489_7581329_7581548_7581668
ENSMUSG00000024972.17_7576157_7580390_1	chr19	-	264	4	ISM	ENSMUSG00000024972.17	ENST00000425950.2	886	7	1376	795	1376	-795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTCTTTCACCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	7580390	7576156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7576276_7578012_7578102_7579407_7579447_7580373
ENSMUSG00000024972.17_7576213_7580441_1	chr19	-	259	4	ISM	ENSMUSG00000024972.17	ENST00000425950.2	886	7	1325	851	1325	-851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGAACACTGGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	7580441	7576212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_7576276_7578012_7578102_7579407_7579447_7580373
ENSMUSG00000024974.11_53588942_53609062_1	chr19	+	501	8	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	113	25202	113	-25202	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAGAGAAGTAGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	53588941	53609062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019
ENSMUSG00000024974.11_53603549_53610245_1	chr19	+	489	6	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	14720	24019	14720	-24019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGTATCAGAAGTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	53603548	53610245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161
ENSMUSG00000024974.11_53606906_53611082_1	chr19	+	493	5	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	18077	23182	18077	-23182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCCCAGCAGGATGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	53606905	53611082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034
ENSMUSG00000024974.11_53607239_53611559_1	chr19	+	494	5	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	18410	22705	18410	-22705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAGAGCAGATTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	53607238	53611559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482
ENSMUSG00000024974.11_53610271_53613435_1	chr19	+	491	5	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	21442	20829	21442	-20829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAGTTTACGTCAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	53610270	53613435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379
ENSMUSG00000024974.11_53611544_53616334_1	chr19	+	493	4	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	22715	17930	22715	-17930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATATTATGAAGTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	53611543	53616334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53611648_53611897_53612020_53613379_53613594_53616281
ENSMUSG00000024974.11_53611905_53616569_1	chr19	+	519	4	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	23076	17695	23076	-17695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGCAACAGGAAAGGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	53611904	53616569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53612020_53613379_53613594_53616281_53616386_53616483
ENSMUSG00000024974.11_53613380_53617130_1	chr19	+	451	4	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	24551	17134	24551	-17134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTAGAACATTTTCGGCG	NA	NA	NA	NA	NA	NA	NA	NA	53613379	53617130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53613594_53616281_53616386_53616483_53616584_53617097
ENSMUSG00000024974.11_53613517_53617749_1	chr19	+	517	5	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	24688	16515	24688	-16515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAGGTGACTTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	53613516	53617749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674
ENSMUSG00000024974.11_53616484_53619961_1	chr19	+	447	4	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	27655	14303	27655	-14303	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAAGCTTTCAAACATG	NA	NA	NA	NA	NA	NA	NA	NA	53616483	53619961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53616584_53617097_53617259_53617674_53617817_53619917
ENSMUSG00000024974.11_53616504_53620043_1	chr19	+	509	4	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	27675	14221	27675	-14221	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGGACTGTATTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	53616503	53620043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53616584_53617097_53617259_53617674_53617817_53619917
ENSMUSG00000024974.11_53617140_53622480_1	chr19	+	503	4	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	28311	11784	28311	-11784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAGGAGCTGGGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	53617139	53622480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53617259_53617674_53617817_53619917_53620069_53622389
ENSMUSG00000024974.11_53617207_53622542_1	chr19	+	498	4	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	28378	11722	28378	-11722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCTTCTGTTTGAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	53617206	53622542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53617259_53617674_53617817_53619917_53620069_53622389
ENSMUSG00000024974.11_53617723_53624193_1	chr19	+	490	4	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	28894	10071	28894	-10071	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAGATGAAGATGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	53617722	53624193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53617817_53619917_53620069_53622389_53622543_53624101
ENSMUSG00000024974.11_53619977_53624926_1	chr19	+	512	4	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	31148	9338	31148	-9338	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTCGACGCTCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	53619976	53624926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53620069_53622389_53622543_53624101_53624254_53624811
ENSMUSG00000024974.11_53624211_53629258_1	chr19	+	485	5	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	35382	5006	35382	-5006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAATATGGAGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	53624210	53629258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192
ENSMUSG00000024974.11_53624928_53629419_1	chr19	+	487	4	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	36099	4845	36099	-4845	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACACTGAGCCTGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	53624927	53629419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53624971_53627128_53627237_53627757_53627867_53629192
ENSMUSG00000024974.11_53627168_53629601_1	chr19	+	499	4	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	38339	4663	38339	-4663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGAATTTCTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	53627167	53629601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53627237_53627757_53627867_53629192_53629441_53629528
ENSMUSG00000024974.11_53629191_53629737_1	chr19	+	463	2	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	40362	-4527	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGTGTGTTCTGTTGATA	NA	NA	NA	NA	NA	NA	NA	NA	53629190	53629737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_53629445_53629528
ENSMUSG00000024974.11_53629227_53630028_1	chr19	+	500	3	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	40398	4236	40398	-4236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTGGAGGGCAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	53629226	53630028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53629441_53629528_53629742_53629955
ENSMUSG00000024974.11_53629383_53630322_1	chr19	+	494	4	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	40554	3942	40554	-3942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATGCAGCAGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	53629382	53630322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53629441_53629528_53629742_53629955_53630148_53630291
ENSMUSG00000024974.11_53629663_53632324_1	chr19	+	499	4	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	40834	1940	40834	-1940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTGAACTGCTTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	53629662	53632324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53629742_53629955_53630148_53630291_53630470_53632274
ENSMUSG00000024974.11_53629729_53632381_1	chr19	+	490	4	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	40900	1883	40900	-1883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTTACTTTCTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	53629728	53632381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53629742_53629955_53630148_53630291_53630470_53632274
ENSMUSG00000024974.11_53630028_53633239_1	chr19	+	507	4	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	41199	1025	41199	-1025	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATAATAATGTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	53630027	53633239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53630148_53630291_53630470_53632274_53632382_53633137
ENSMUSG00000024974.11_53630078_53633268_1	chr19	+	486	4	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	41249	996	41249	-996	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGTAAATTTTAAAACTAA	NA	NA	NA	NA	NA	NA	NA	NA	53630077	53633268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53630148_53630291_53630470_53632274_53632382_53633137
ENSMUSG00000024974.11_53630384_53633431_1	chr19	+	487	3	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	41555	833	41555	-833	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTATTTTAAATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	53630383	53633431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53630470_53632274_53632382_53633137
ENSMUSG00000024974.11_53630440_53633481_1	chr19	+	481	3	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	41611	783	41611	-783	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGCTTCTATTAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	53630439	53633481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53630470_53632274_53632382_53633137
ENSMUSG00000024974.11_53632355_53633632_1	chr19	+	522	2	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	43526	632	43526	-632	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATTACTCACTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	53632354	53633632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53632382_53633137
ENSMUSG00000024981.7_55241801_55280231_1	chr19	+	2330	17	ISM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	0	5921	0	-5921	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCTACCTAAAGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	55241800	55280231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204
ENSMUSG00000024981.7_55241801_55280275_1	chr19	+	2374	17	ISM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	0	5877	0	-5877	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATGGATGGCTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	55241800	55280275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204
ENSMUSG00000024981.7_55242058_55282664_1	chr19	+	2338	19	ISM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	257	3488	257	-3488	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTCACTTCCCTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	55242057	55282664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633
ENSMUSG00000024981.7_55242074_55282150_1	chr19	+	2274	17	NNC	ENSMUSG00000024981.7	novel	4243	22	NA	NA	273	-4002	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGCTTACGGGTAATACA	NA	NA	NA	NA	NA	NA	NA	NA	55242073	55282150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269080_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018
ENSMUSG00000024981.7_55242254_55283820_1	chr19	+	2301	21	ISM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	453	2332	453	-2332	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCCAGAGCCCTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	55242253	55283820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804
ENSMUSG00000024981.7_55242404_55284819_1	chr19	+	2307	22	FSM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	603	1333	603	-1333	multi-exon	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGAAGTGGAAACTATG	NA	NA	NA	NA	NA	NA	NA	NA	55242403	55284819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ENSMUSG00000024981.7_55242439_55284887_1	chr19	+	2340	22	FSM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	638	1265	638	-1265	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGGGAACAAAGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	55242438	55284887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ENSMUSG00000024981.7_55242498_55284940_1	chr19	+	2334	22	FSM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	697	1212	697	-1212	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTTCTGTGGATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	55242497	55284940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ENSMUSG00000024981.7_55257149_55285069_1	chr19	+	2289	21	ISM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	15348	1083	15348	-1083	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCTTGTGAACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	55257148	55285069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ENSMUSG00000024981.7_55257189_55285130_1	chr19	+	2310	21	ISM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	15388	1022	15388	-1022	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCACGCCTTTAATCC	NA	NA	NA	NA	NA	NA	NA	NA	55257188	55285130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ENSMUSG00000024981.7_55261302_55285275_1	chr19	+	2282	20	ISM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	19501	877	19501	-877	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	55261301	55285275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ENSMUSG00000024981.7_55266601_55285435_1	chr19	+	2281	18	ISM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	24800	717	24800	-717	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACCCACAACTACAACACT	NA	NA	NA	NA	NA	NA	NA	NA	55266600	55285435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ENSMUSG00000024981.7_55268925_55285605_1	chr19	+	2285	16	ISM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	27124	547	27124	-547	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGGTCTTTAATCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	55268924	55285605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ENSMUSG00000024981.7_55268972_55285664_1	chr19	+	2297	16	ISM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	27171	488	27171	-488	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTTGCTGTATGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	55268971	55285664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ENSMUSG00000024981.7_55271793_55285999_1	chr19	+	2340	12	ISM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	29992	153	29992	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTAGTGCCTTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	55271792	55285999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ENSMUSG00000024981.7_55276258_55286152_1	chr19	+	2335	10	ISM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	34457	0	34457	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGACTTGTCTCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	55276257	55286152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ENSMUSG00000024982.11_55282209_55291168_1	chr19	-	140	3	ISM	ENSMUSG00000024982.11	ENST00000683505.1	2077	10	11939	784	11939	-784	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGGCTATGAGAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	55291168	55282208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_55282256_55290989_55291037_55291122
ENSMUSG00000024982.11_55286752_55302800_1	chr19	-	1574	10	FSM	ENSMUSG00000024982.11	ENST00000682055.1	1877	10	307	-4	307	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATAGTTTTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	55302800	55286751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55299990_55300217_55301620_55301713_55302732
ENSMUSG00000024982.11_55286752_55302951_1	chr19	-	1725	10	FSM	ENSMUSG00000024982.11	ENST00000682055.1	1877	10	156	-4	156	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATAGTTTTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	55302951	55286751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55299990_55300217_55301620_55301713_55302732
ENSMUSG00000024982.11_55286878_55303019_1	chr19	-	1667	10	FSM	ENSMUSG00000024982.11	ENST00000682055.1	1877	10	88	122	88	-122	multi-exon	FALSE	canonical	NA	NA	NA	NA	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACATTTCCTTCATAAT	NA	NA	NA	NA	NA	NA	NA	NA	55303019	55286877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55299990_55300217_55301620_55301713_55302732
ENSMUSG00000024982.11_55287220_55301712_1	chr19	-	972	9	ISM	ENSMUSG00000024982.11	ENSMUST00000076891.7	2263	11	2750	468	1395	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCACTGTTAAAGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	55301712	55287219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620
ENSMUSG00000024982.11_55290944_55302800_1	chr19	-	985	9	ISM	ENSMUSG00000024982.11	ENSMUST00000224291.2	2603	11	1620	1709	307	-1709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCCAAATTCATAAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	55302800	55290943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732
ENSMUSG00000024982.11_55292127_55302951_1	chr19	-	899	7	ISM	ENSMUSG00000024982.11	ENSMUST00000224291.2	2603	11	1469	2892	156	-2892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGCCTATTTGCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	55302951	55292126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732
ENSMUSG00000024982.11_55292127_55303019_1	chr19	-	967	7	ISM	ENSMUSG00000024982.11	ENSMUST00000224291.2	2603	11	1401	2892	88	-2892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGCCTATTTGCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	55303019	55292126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732
ENSMUSG00000024982.11_55297331_55303204_1	chr19	-	945	5	ISM	ENSMUSG00000024982.11	ENSMUST00000224291.2	2603	11	1216	8096	-97	-8096	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATAATTGTTCCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	55303204	55297330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732
ENSMUSG00000024982.11_55298199_55304258_1	chr19	-	893	5	ISM	ENSMUSG00000024982.11	ENSMUST00000224291.2	2603	11	162	8964	162	-8964	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGATGTTGTTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	55304258	55298198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ENSMUSG00000024982.11_55298245_55304314_1	chr19	-	903	5	ISM	ENSMUSG00000024982.11	ENSMUST00000224291.2	2603	11	106	9010	106	-9010	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCACCTTGTTTGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	55304314	55298244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ENSMUSG00000024982.11_55298310_55304420_1	chr19	-	944	5	ISM	ENSMUSG00000024982.11	ENSMUST00000224291.2	2603	11	0	9075	0	-9075	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGACATGAGTGCAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	55304420	55298309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ENSMUSG00000024983.11_55304789_55564925_1	chr19	+	674	8	FSM	ENSMUSG00000024983.11	ENSMUST00000225529.2	1244	8	62	508	6	-508	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTATATCCATGACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55304788	55564925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55564905
ENSMUSG00000024983.11_55304907_55564988_1	chr19	+	619	8	FSM	ENSMUSG00000024983.11	ENSMUST00000225529.2	1244	8	180	445	124	-445	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTCAGAGCAAAGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	55304906	55564988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55564905
ENSMUSG00000024983.11_55310396_55565089_1	chr19	+	625	7	ISM	ENSMUSG00000024983.11	ENSMUST00000225529.2	1244	8	5669	344	5613	-344	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGAGCCTAGCACACAT	NA	NA	NA	NA	NA	NA	NA	NA	55310395	55565089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55564905
ENSMUSG00000024983.11_55369446_55565265_1	chr19	+	584	5	ISM	ENSMUSG00000024983.11	ENSMUST00000225529.2	1244	8	64719	168	64663	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGGAACAAAGAAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	55369445	55565265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55564905
ENSMUSG00000024985.21_55730316_55806269_1	chr19	+	982	5	ISM	ENSMUSG00000024985.21	ENSMUST00000153888.9	2318	15	-380	114372	0	-114020	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTCGCCGTCGCCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	55730315	55806269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55730963_55731207_55731275_55731504_55731630_55743445_55743515_55806195
ENSMUSG00000024985.21_55730490_55921147_1	chr19	+	2929	14	NNC	ENSMUSG00000024985.21	novel	4114	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTCCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55730489	55921147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_55730963_55731207_55731275_55731504_55731630_55743445_55743515_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901072_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55919865
ENSMUSG00000024985.21_55730490_55921147_2	chr19	+	2935	14	FSM	ENSMUSG00000024985.21	ENST00000538897.5	4114	14	237	942	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTCCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55730489	55921147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55743445_55743515_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55919865
ENSMUSG00000024985.21_55730675_55921243_1	chr19	+	2841	14	NNC	ENSMUSG00000024985.21	novel	4114	14	NA	NA	-21	96	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCGCATTAAGGATCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	55730674	55921243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_55730963_55731207_55731275_55731504_55731630_55743445_55743515_55806195_55806298_55896854_55896988_55899010_55899114_55900995_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55919865
ENSMUSG00000024985.21_55730699_55851993_1	chr19	+	702	5	NNC	ENSMUSG00000024985.21	novel	2000	13	NA	NA	0	-68296	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTCTTGGAGCAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	55730698	55851993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55851849
ENSMUSG00000024985.21_55730774_55921014_1	chr19	+	2555	14	FSM	ENSMUSG00000024985.21	ENST00000543371.5	4151	14	521	1075	0	-133	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCCAATTTTAAATATGTT	NA	NA	NA	NA	NA	NA	NA	NA	55730773	55921014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55743445_55743515_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905770_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55915115_55915189_55919865
ENSMUSG00000024985.21_55730890_55921558_1	chr19	+	2946	14	FSM	ENSMUSG00000024985.21	ENST00000538897.5	4114	14	637	531	116	-103	multi-exon	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGTGTTTGGTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	55730889	55921558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55743445_55743515_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55919865
ENSMUSG00000024985.21_55730890_55921686_1	chr19	+	3005	13	FSM	ENSMUSG00000024985.21	ENSMUST00000061496.17	3193	13	189	-1	116	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGCTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	55730889	55921686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55919865
ENSMUSG00000024985.21_55730941_55899113_1	chr19	+	696	7	NNC	ENSMUSG00000024985.21	novel	2000	13	NA	NA	167	-21176	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAATTCCAGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	55730940	55899113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55851849_55851994_55896854_55896988_55899010
ENSMUSG00000024985.21_55731206_55921686_1	chr19	+	3003	13	ISM	ENSMUSG00000024985.21	ENST00000538897.5	4114	14	953	403	432	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGCTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	55731205	55921686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55731275_55731504_55731630_55743445_55743515_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55919865
ENSMUSG00000024985.21_55731503_55901079_1	chr19	+	698	6	NNC	ENSMUSG00000024985.21	novel	2000	13	NA	NA	729	-19210	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCGCTGTGACTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55731502	55901079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_55731630_55806195_55806298_55851849_55851994_55896854_55896988_55899010_55899114_55900990
ENSMUSG00000024985.21_55806196_55905911_1	chr19	+	695	6	NNC	ENSMUSG00000024985.21	novel	2000	13	NA	NA	75422	-14378	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTACCACGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	55806195	55905911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_55806298_55851849_55851994_55896854_55896988_55899010_55899114_55900990_55901078_55905785
ENSMUSG00000024985.21_55806221_55921885_1	chr19	+	2914	10	ISM	ENSMUSG00000024985.21	ENSMUST00000061496.17	3193	13	75520	-200	75447	200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTTCTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55806220	55921885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55919865
ENSMUSG00000024985.21_55851907_55907398_1	chr19	+	618	6	ISM	ENSMUSG00000024985.21	ENST00000355717.9	2000	13	121319	12891	-32035	-12891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGATGAGAGCGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	55851906	55907398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55851994_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316
ENSMUSG00000024985.21_55896855_55919993_1	chr19	+	1018	10	ISM	ENSMUSG00000024985.21	ENSMUST00000111657.11	2135	14	166081	634	12913	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGTCACAGACTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	55896854	55919993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55914408_55914482_55919865
ENSMUSG00000024985.21_55896882_55922086_1	chr19	+	3011	9	ISM	ENSMUSG00000024985.21	ENSMUST00000061496.17	3193	13	166181	-401	12940	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCTGGCCGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	55896881	55922086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55919865
ENSMUSG00000024985.21_55899062_55919901_1	chr19	+	618	7	ISM	ENSMUSG00000024985.21	ENST00000355717.9	2000	13	168474	388	15120	-388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGCTGCCTCAGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	55899061	55919901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ENSMUSG00000024985.21_55900998_55920165_1	chr19	+	947	8	ISM	ENSMUSG00000024985.21	ENSMUST00000111657.11	2135	14	170224	462	17056	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCGTCCATGGTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	55900997	55920165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55914408_55914482_55919865
ENSMUSG00000024985.21_55907378_55920444_1	chr19	+	959	6	ISM	ENSMUSG00000024985.21	ENSMUST00000111657.11	2135	14	176604	183	23436	155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGACCCATTCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	55907377	55920444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55914408_55914482_55919865
ENSMUSG00000024987.7_37686089_37687511_1	chr19	+	676	3	ISM	ENSMUSG00000024987.7	ENST00000371531.5	1735	7	48	2502	48	-2473	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACCGGGTAAGGGCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	37686088	37687511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_37686257_37686738_37686964_37687228
ENSMUSG00000024987.7_37686246_37687758_1	chr19	+	687	4	ISM	ENSMUSG00000024987.7	ENST00000371531.5	1735	7	205	2255	0	-2226	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAGCAATTTCAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	37686245	37687758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_37686257_37686738_37686964_37687228_37687520_37687598
ENSMUSG00000024987.7_37686807_37688438_1	chr19	+	702	4	ISM	ENSMUSG00000024987.7	ENSMUST00000025946.7	1791	7	561	1546	561	-1546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTCCTCCAGAAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	37686806	37688438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_37686964_37687228_37687520_37687598_37687758_37688343
ENSMUSG00000024987.7_37686917_37689109_1	chr19	+	676	5	ISM	ENSMUSG00000024987.7	ENSMUST00000025946.7	1791	7	671	875	671	-875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTGGAACAGCTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	37686916	37689109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_37686964_37687228_37687520_37687598_37687758_37688343_37688479_37689065
ENSMUSG00000024987.7_37687392_37689554_1	chr19	+	672	5	ISM	ENSMUSG00000024987.7	ENSMUST00000025946.7	1791	7	1146	430	1146	-430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCTTTATAGTGCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	37687391	37689554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_37687520_37687598_37687758_37688343_37688479_37689065_37689219_37689457
ENSMUSG00000024987.7_37687621_37689706_1	chr19	+	674	4	ISM	ENSMUSG00000024987.7	ENSMUST00000025946.7	1791	7	1375	278	1375	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAATGGACCTCCTACAAT	NA	NA	NA	NA	NA	NA	NA	NA	37687620	37689706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_37687758_37688343_37688479_37689065_37689219_37689457
ENSMUSG00000024987.7_37687648_37689783_1	chr19	+	724	4	ISM	ENSMUSG00000024987.7	ENSMUST00000025946.7	1791	7	1402	201	1402	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGGAGATATCTGATAGC	NA	NA	NA	NA	NA	NA	NA	NA	37687647	37689783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_37687758_37688343_37688479_37689065_37689219_37689457
ENSMUSG00000024987.7_37687726_37689808_1	chr19	+	671	4	ISM	ENSMUSG00000024987.7	ENSMUST00000025946.7	1791	7	1480	176	1480	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTTGGACTTATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	37687725	37689808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_37687758_37688343_37688479_37689065_37689219_37689457
ENSMUSG00000024987.7_37688430_37689984_1	chr19	+	729	3	ISM	ENSMUSG00000024987.7	ENSMUST00000025946.7	1791	7	2184	0	2184	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTGCTTTTTAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	37688429	37689984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_37688479_37689065_37689219_37689457
ENSMUSG00000024989.16_38043537_38058141_1	chr19	+	974	6	ISM	ENSMUSG00000024989.16	ENST00000371485.8	2634	9	78	4731	0	-3805	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCTCGAAGTTGAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	38043536	38058141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38043766_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087
ENSMUSG00000024989.16_38043661_38058144_1	chr19	+	1010	7	ISM	ENSMUSG00000024989.16	ENSMUST00000169673.3	2757	10	171	4725	124	-3802	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCGAAGTTGAGCGACAA	NA	NA	NA	NA	NA	NA	NA	NA	38043660	38058144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38043766_38045857_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087
ENSMUSG00000024989.16_38043674_38058188_1	chr19	+	884	6	ISM	ENSMUSG00000024989.16	ENST00000371485.8	2634	9	215	4684	137	-3758	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCGATGAATTTCGAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	38043673	38058188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38043766_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087
ENSMUSG00000024989.16_38043714_38058251_1	chr19	+	907	6	ISM	ENSMUSG00000024989.16	ENST00000371485.8	2634	9	255	4621	177	-3695	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCTCTCAGCGAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	38043713	38058251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38043766_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087
ENSMUSG00000024989.16_38045892_38058270_1	chr19	+	997	6	ISM	ENSMUSG00000024989.16	ENSMUST00000169673.3	2757	10	2402	4599	2355	-3676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACATCCAGCACCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	38045891	38058270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087
ENSMUSG00000024989.16_38045944_38058347_1	chr19	+	1022	6	ISM	ENSMUSG00000024989.16	ENSMUST00000169673.3	2757	10	2454	4522	2407	-3599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGGAAAGCTGGAAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	38045943	38058347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087
ENSMUSG00000024989.16_38046387_38059545_1	chr19	+	879	6	ISM	ENSMUSG00000024989.16	ENSMUST00000116506.8	1440	9	2899	2401	2850	-2401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCACCAAGAGGAGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	38046386	38059545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518
ENSMUSG00000024989.16_38048593_38060307_1	chr19	+	910	6	ISM	ENSMUSG00000024989.16	ENSMUST00000116506.8	1440	9	5105	1639	5056	-1639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTCAAATAACACAGT	NA	NA	NA	NA	NA	NA	NA	NA	38048592	38060307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212
ENSMUSG00000024989.16_38048733_38061819_1	chr19	+	872	7	ISM	ENSMUSG00000024989.16	ENSMUST00000116506.8	1440	9	5245	127	5196	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTCACCCAAAAGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	38048732	38061819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061748
ENSMUSG00000024989.16_38051047_38061946_1	chr19	+	931	6	ISM	ENSMUSG00000024989.16	ENSMUST00000116506.8	1440	9	7559	0	7510	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAACCATTCTTGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	38051046	38061946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061748
ENSMUSG00000024989.16_38058086_38062125_1	chr19	+	888	4	ISM	ENSMUSG00000024989.16	ENSMUST00000116506.8	1440	9	14598	-179	14549	179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGAGTTGGTTCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	38058085	38062125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38058399_38059518_38059591_38060212_38060339_38061748
ENSMUSG00000024989.16_38059532_38062450_1	chr19	+	887	3	ISM	ENSMUSG00000024989.16	ENSMUST00000237408.2	2683	10	15995	419	15995	-419	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGTAATGTTGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	38059531	38062450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38059591_38060212_38060339_38061748
ENSMUSG00000024989.16_38060239_38062552_1	chr19	+	907	2	ISM	ENSMUSG00000024989.16	ENSMUST00000169673.3	2757	10	16749	317	16702	-317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAACTTTGACTTAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	38060238	38062552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38060339_38061745
ENSMUSG00000024991.9_60749806_60751565_1	chr19	-	1000	2	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	27516	251	27516	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAATATGACAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	60751565	60749805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60750743_60751502
ENSMUSG00000024991.9_60749847_60751630_1	chr19	-	1024	2	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	27451	292	27451	-292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAAAACTGCTTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	60751630	60749846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60750743_60751502
ENSMUSG00000024991.9_60749968_60752524_1	chr19	-	1030	3	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	26557	413	26557	-413	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGAGTATAAAGCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	60752524	60749967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60750743_60751502_60751703_60752469
ENSMUSG00000024991.9_60750037_60752579_1	chr19	-	1016	3	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	26502	482	26502	-482	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGATCAGTGTAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	60752579	60750036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60750743_60751502_60751703_60752469
ENSMUSG00000024991.9_60750277_60754865_1	chr19	-	962	4	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	24216	722	24216	-722	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAACTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	60754865	60750276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771
ENSMUSG00000024991.9_60750378_60755025_1	chr19	-	1021	4	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	24056	823	24056	-823	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATATAATAGATTGATC	NA	NA	NA	NA	NA	NA	NA	NA	60755025	60750377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771
ENSMUSG00000024991.9_60750566_60755182_1	chr19	-	990	4	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	23899	1011	23899	-1011	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAGAATGAAACTGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	60755182	60750565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771
ENSMUSG00000024991.9_60751539_60755405_1	chr19	-	1000	3	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	23676	1984	23676	-1984	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGGACCTCCCCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	60755405	60751538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60751703_60752469_60752672_60754771
ENSMUSG00000024991.9_60752502_60757223_1	chr19	-	999	4	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	21858	2947	21858	-2947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACCGGGAGGATCGATT	NA	NA	NA	NA	NA	NA	NA	NA	60757223	60752501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60752672_60754771_60755434_60756012_60756102_60757145
ENSMUSG00000024991.9_60755077_60760173_1	chr19	-	1000	6	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	18908	5522	18908	-5522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGGACCTAGACGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	60760173	60755076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081
ENSMUSG00000024991.9_60755307_60761228_1	chr19	-	996	8	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	17853	5752	17853	-5752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGTGGCCTGGATGATGA	NA	NA	NA	NA	NA	NA	NA	NA	60761228	60755306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129
ENSMUSG00000024991.9_60755376_60761291_1	chr19	-	990	8	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	17790	5821	17790	-5821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCGCTTGGGGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	60761291	60755375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129
ENSMUSG00000024991.9_60757256_60762046_1	chr19	-	1021	7	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	17035	7701	17035	-7701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTAGAAGAAGTAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	60762046	60757255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944
ENSMUSG00000024991.9_60758400_60762394_1	chr19	-	990	7	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	16687	8845	16687	-8845	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCGGAAAAGGCAGCGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	60762394	60758399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338
ENSMUSG00000024991.9_60759501_60763790_1	chr19	-	1005	7	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	15291	9946	15291	-9946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTATTTGTGATGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	60763790	60759500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730
ENSMUSG00000024991.9_60760579_60765158_1	chr19	-	1007	7	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	13923	11024	13923	-11024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAGAAGGAACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	60765158	60760578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063
ENSMUSG00000024991.9_60761235_60766510_1	chr19	-	1056	7	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	12571	11680	12571	-11680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCAAGAACACGAGCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	60766510	60761234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376
ENSMUSG00000024991.9_60761289_60766564_1	chr19	-	1056	7	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	12517	11734	12517	-11734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAAGAAGAAAGGCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	60766564	60761288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376
ENSMUSG00000024991.9_60761433_60766585_1	chr19	-	933	7	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	12496	11878	12496	-11878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTCAAGAAAAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	60766585	60761432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376
ENSMUSG00000024991.9_60761985_60767958_1	chr19	-	1011	7	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	11123	12430	11123	-12430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCAAAGCACTTGAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	60767958	60761984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795
ENSMUSG00000024991.9_60763729_60770459_1	chr19	-	1088	7	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	8622	14174	8622	-14174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAATGATTTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	60770459	60763728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322
ENSMUSG00000024991.9_60765085_60770789_1	chr19	-	1045	6	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	8292	15530	8292	-15530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGGCCTAATTAATGATAT	NA	NA	NA	NA	NA	NA	NA	NA	60770789	60765084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605
ENSMUSG00000024991.9_60766400_60779081_1	chr19	-	1053	6	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	0	16845	0	-16845	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACACAAGAAGAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	60779081	60766399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ENSMUSG00000024993.16_60800049_60821058_1	chr19	+	847	8	ISM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	0	3607	0	-3607	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTAATTGTGCAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	60800048	60821058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_60800112_60803049_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021
ENSMUSG00000024993.16_60803056_60823278_1	chr19	+	851	8	ISM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	3007	1387	3007	-1387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAGAAATCTTCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	60803055	60823278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ENSMUSG00000024993.16_60803129_60823312_1	chr19	+	812	8	ISM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	3080	1353	3080	-1353	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGTGTCTGATGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	60803128	60823312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ENSMUSG00000024993.16_60803170_60823387_1	chr19	+	846	8	ISM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	3121	1278	3121	-1278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAAACTTCCTGTATCAT	NA	NA	NA	NA	NA	NA	NA	NA	60803169	60823387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ENSMUSG00000024993.16_60810773_60823702_1	chr19	+	815	5	ISM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	10724	963	10724	-963	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCTATTTAGTCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	60810772	60823702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ENSMUSG00000024993.16_60814301_60823808_1	chr19	+	817	4	ISM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	14252	857	14252	-857	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGTATACTTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	60814300	60823808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_60814370_60819224_60819333_60821021_60821117_60823263
ENSMUSG00000024993.16_60819251_60823931_1	chr19	+	845	3	ISM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	19202	734	19202	-734	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTATATTATGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	60819250	60823931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_60819333_60821021_60821117_60823263
ENSMUSG00000024993.16_60821101_60824064_1	chr19	+	817	2	ISM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	21052	601	21052	-601	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCTTTGGAAAAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	60821100	60824064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_60821117_60823263
ENSMUSG00000024997.8_60852956_60853734_1	chr19	-	333	2	ISM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	9260	467	9260	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGACAGGTTCAGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	60853734	60852955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60853158_60853603
ENSMUSG00000024997.8_60853104_60856057_1	chr19	-	324	3	ISM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	6937	615	6937	-615	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCCTATGTCTGCAATT	NA	NA	NA	NA	NA	NA	NA	NA	60856057	60853103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60853158_60853603_60853770_60855953
ENSMUSG00000024997.8_60853604_60858577_1	chr19	-	406	3	ISM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	4417	1115	4417	-1115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGTTTTCCTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	60858577	60853603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60853770_60855953_60856058_60858441
ENSMUSG00000024997.8_60853716_60859910_1	chr19	-	347	4	ISM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	3084	1227	3084	-1227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCGGTGGGCCGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	60859910	60853715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60853770_60855953_60856058_60858441_60858578_60859857
ENSMUSG00000024997.8_60853751_60859999_1	chr19	-	401	4	ISM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	2995	1262	2995	-1262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAATGGTGTCGTCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	60859999	60853750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60853770_60855953_60856058_60858441_60858578_60859857
ENSMUSG00000024997.8_60856020_60861588_1	chr19	-	339	4	ISM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	1406	3531	1406	-3531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATATAACTAAGCAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	60861588	60856019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60856058_60858441_60858578_60859857_60860000_60861565
ENSMUSG00000024997.8_60858442_60861701_1	chr19	-	414	3	ISM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	1293	5953	1293	-5953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTTGGGTGACAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	60861701	60858441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60858578_60859857_60860000_60861565
ENSMUSG00000024997.8_60858534_60862884_1	chr19	-	337	4	ISM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	110	6045	110	-6045	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATGAATTTCATGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	60862884	60858533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60858578_60859857_60860000_60861565_60861702_60862869
ENSMUSG00000025007.14_40538701_40576828_2	chr19	-	3444	19	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	40576828	40538700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562298_40562650_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ENSMUSG00000025007.14_40538701_40576878_1	chr19	-	3491	19	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	40576878	40538700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551477_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ENSMUSG00000025008.16_40585621_40597776_1	chr19	-	1358	10	ISM	ENSMUSG00000025008.16	ENST00000680144.1	1599	12	2440	0	2440	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTTCCATTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	40597776	40585620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40585987_40591248_40591387_40593749_40593898_40594146_40594227_40594669_40594778_40595721_40595848_40596663_40596700_40597135_40597252_40597345_40597455_40597645
ENSMUSG00000025008.16_40585723_40599858_1	chr19	-	1375	11	NNC	ENSMUSG00000025008.16	novel	1599	12	NA	NA	358	-102	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGAAACAAAGACAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	40599858	40585722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_40585987_40591248_40591387_40593749_40593898_40594146_40594225_40594669_40594778_40595721_40595848_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737
ENSMUSG00000025008.16_40585801_40594703_1	chr19	-	601	5	ISM	ENSMUSG00000025008.16	ENST00000265993.13	1695	13	5513	180	5513	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTCTTACTACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	40594703	40585800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40585987_40591248_40591387_40593749_40593898_40594146_40594242_40594669
ENSMUSG00000025008.16_40585823_40600115_1	chr19	-	1296	12	FSM	ENSMUSG00000025008.16	ENST00000680144.1	1599	12	101	202	101	-202	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGACTCTCTCGTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	40600115	40585822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_40585987_40591248_40591387_40593749_40593898_40594146_40594227_40594669_40594778_40595721_40595848_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094
ENSMUSG00000025008.16_40585861_40600179_1	chr19	-	1322	12	FSM	ENSMUSG00000025008.16	ENST00000680144.1	1599	12	37	240	37	-240	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCAAAGCGGCGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	40600179	40585860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_40585987_40591248_40591387_40593749_40593898_40594146_40594227_40594669_40594778_40595721_40595848_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094
ENSMUSG00000025008.16_40585926_40600216_1	chr19	-	1294	12	FSM	ENSMUSG00000025008.16	ENST00000680144.1	1599	12	0	305	0	-305	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCAGAGCCTCCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	40600216	40585925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_40585987_40591248_40591387_40593749_40593898_40594146_40594227_40594669_40594778_40595721_40595848_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094
ENSMUSG00000025008.16_40585940_40595752_1	chr19	-	567	6	ISM	ENSMUSG00000025008.16	ENST00000265993.13	1695	13	4464	319	4464	-319	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGACATTACCCAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	40595752	40585939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40585987_40591248_40591387_40593749_40593898_40594146_40594242_40594669_40594778_40595721
ENSMUSG00000025008.16_40591337_40596099_1	chr19	-	557	6	ISM	ENSMUSG00000025008.16	ENST00000265993.13	1695	13	4117	5716	4117	2205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGTGGGCACATCTAG	NA	NA	NA	NA	NA	NA	NA	NA	40596099	40591336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40591387_40593749_40593898_40594146_40594242_40594669_40594778_40595721_40595848_40596069
ENSMUSG00000025008.16_40591341_40597154_1	chr19	-	644	8	ISM	ENSMUSG00000025008.16	ENST00000680709.1	1440	11	3062	5720	3062	2201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGTGTTGTGGGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	40597154	40591340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40591387_40593749_40593898_40594146_40594227_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135
ENSMUSG00000025008.16_40593840_40597184_1	chr19	-	553	7	ISM	ENSMUSG00000025008.16	ENST00000265993.13	1695	13	3032	8219	3032	-298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGGAGCACGTTGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	40597184	40593839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40593898_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135
ENSMUSG00000025008.16_40593854_40599795_1	chr19	-	649	8	ISM	ENSMUSG00000025008.16	ENST00000680709.1	1440	11	421	8233	421	-312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACGGAAGGCCCAGACCG	NA	NA	NA	NA	NA	NA	NA	NA	40599795	40593853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40593898_40594146_40594227_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40599737
ENSMUSG00000025008.16_40594706_40600190_1	chr19	-	646	7	ISM	ENSMUSG00000025008.16	ENST00000680709.1	1440	11	26	9085	26	863	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCTTAGTGCTAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	40600190	40594705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40599737_40599857_40600094
ENSMUSG00000025008.16_40594733_40597717_1	chr19	-	585	7	ISM	ENSMUSG00000025008.16	ENSMUST00000135795.8	1686	12	2930	1191	2499	836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATCCTGGCTACCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	40597717	40594732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645
ENSMUSG00000025008.16_40595786_40599816_1	chr19	-	614	7	ISM	ENSMUSG00000025008.16	ENSMUST00000132452.2	1271	9	828	217	400	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGACCAACCTGACTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	40599816	40595785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737
ENSMUSG00000025010.15_40819723_40836087_1	chr19	+	2857	6	FSM	ENSMUSG00000025010.15	ENST00000265992.9	3891	6	105	929	0	-366	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGAGTTCTTCCGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	40819722	40836087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_40819887_40820422_40820533_40825360_40825572_40833103_40833404_40833521_40833649_40834142
ENSMUSG00000025010.15_40819723_40836200_1	chr19	+	2970	6	FSM	ENSMUSG00000025010.15	ENST00000265992.9	3891	6	105	816	0	-253	multi-exon	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGCATGAAAACTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	40819722	40836200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_40819887_40820422_40820533_40825360_40825572_40833103_40833404_40833521_40833649_40834142
ENSMUSG00000025010.15_40819752_40836453_1	chr19	+	3227	6	FSM	ENSMUSG00000025010.15	ENSMUST00000025983.13	3819	6	29	563	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTTAATGTCTTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	40819751	40836453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_40819887_40820422_40820533_40825360_40825572_40833103_40833404_40833488_40833649_40834142
ENSMUSG00000025010.15_40820458_40836453_1	chr19	+	3024	5	ISM	ENSMUSG00000025010.15	ENST00000265992.9	3891	6	840	563	706	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTTAATGTCTTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	40820457	40836453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_40820533_40825360_40825572_40833103_40833404_40833521_40833649_40834142
ENSMUSG00000025010.15_40825489_40836720_1	chr19	+	3121	4	ISM	ENSMUSG00000025010.15	ENSMUST00000119316.2	3763	5	5737	-267	5737	267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGGGGCGGGGGGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	40825488	40836720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_40825572_40833103_40833404_40833488_40833649_40834142
ENSMUSG00000025010.15_40833104_40836716_1	chr19	+	3001	3	ISM	ENSMUSG00000025010.15	ENST00000265992.9	3891	6	13486	300	13352	263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGAGGGGGGCGGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	40833103	40836716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_40833404_40833521_40833649_40834142
ENSMUSG00000025010.15_40833233_40836716_1	chr19	+	2872	3	ISM	ENSMUSG00000025010.15	ENST00000265992.9	3891	6	13615	300	13481	263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGAGGGGGGCGGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	40833232	40836716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_40833404_40833521_40833649_40834142
ENSMUSG00000025010.15_40833233_40837016_1	chr19	+	3205	3	ISM	ENSMUSG00000025010.15	ENSMUST00000025983.13	3819	6	13510	0	13481	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTGCTGCTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	40833232	40837016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_40833404_40833488_40833649_40834142
ENSMUSG00000025010.15_40833520_40837016_1	chr19	+	3003	2	ISM	ENSMUSG00000025010.15	ENSMUST00000025983.13	3819	6	13797	0	13768	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTGCTGCTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	40833519	40837016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_40833649_40834142
ENSMUSG00000025014.14_41017824_41044218_1	chr19	+	1436	10	ISM	ENSMUSG00000025014.14	ENSMUST00000112200.3	1948	11	3	3731	3	-3394	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCTATGCCACACACGAGA	NA	NA	NA	NA	NA	NA	NA	NA	41017823	41044218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41018081_41025586_41025762_41027312_41027442_41028212_41028384_41029719_41029792_41031301_41031426_41034626_41034760_41035967_41036077_41041433_41041680_41044198
ENSMUSG00000025014.14_41018025_41047555_1	chr19	+	1350	11	FSM	ENSMUSG00000025014.14	ENSMUST00000112200.3	1948	11	204	394	197	-57	multi-exon	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGACTACATTGAACCATG	NA	NA	NA	NA	NA	NA	NA	NA	41018024	41047555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_41018081_41025586_41025762_41027312_41027442_41028212_41028384_41029719_41029792_41031301_41031426_41034626_41034760_41035967_41036077_41041433_41041680_41044198_41044283_41047504
ENSMUSG00000025016.12_41203234_41206719_1	chr19	-	617	4	ISM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	45700	1003	45700	-1003	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGACCAGCTCTCTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	41206719	41203233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608
ENSMUSG00000025016.12_41203408_41211564_1	chr19	-	590	6	ISM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	40855	1177	40855	-1177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTACTTTGTGGGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	41211564	41203407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522
ENSMUSG00000025016.12_41203480_41211621_1	chr19	-	575	6	ISM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	40798	1249	40798	-1249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTCATGAGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	41211621	41203479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522
ENSMUSG00000025016.12_41206681_41227183_1	chr19	-	577	6	ISM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	25236	4450	25236	-4450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCATTGTGACTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	41227183	41206680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116
ENSMUSG00000025016.12_41211571_41229098_1	chr19	-	568	5	ISM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	23321	9340	23321	-9340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTCGTGTCAATGCCG	NA	NA	NA	NA	NA	NA	NA	NA	41229098	41211570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015
ENSMUSG00000025016.12_41220859_41235128_1	chr19	-	573	6	ISM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	17291	18628	17291	-18628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCACTGCATTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	41235128	41220858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081
ENSMUSG00000025016.12_41223119_41235236_1	chr19	-	628	5	ISM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	17183	20888	17183	-20888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTAATGCAGGAGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	41235236	41223118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081
ENSMUSG00000025016.12_41227250_41244635_1	chr19	-	580	6	ISM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	7784	25019	7784	-25019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCATGGAGATGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	41244635	41227249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583
ENSMUSG00000025016.12_41229086_41244753_1	chr19	-	594	5	ISM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	7666	26855	7666	-26855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATTTTAATGAGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	41244753	41229085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583
ENSMUSG00000025016.12_41233904_41252283_1	chr19	-	623	5	ISM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	136	31673	136	-31673	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCTTTTTTCAGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	41252283	41233903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ENSMUSG00000025016.12_41235151_41252419_1	chr19	-	633	4	ISM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	0	32920	0	-32920	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTTAATCTAACTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	41252419	41235150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_41235243_41236344_41236468_41244583_41244780_41252197
ENSMUSG00000025019.18_41471632_41550380_1	chr19	+	4472	8	FSM	ENSMUSG00000025019.18	ENST00000356016.7	4831	8	54	305	-16	-279	multi-exon	FALSE	canonical	NA	NA	NA	NA	5831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTGTGAAGCTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	41471631	41550380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_41471738_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41546749
ENSMUSG00000025019.18_41471965_41550569_1	chr19	+	4556	7	ISM	ENSMUSG00000025019.18	ENST00000676381.1	2291	8	317	109	310	-90	intron_retention	FALSE	canonical	NA	NA	NA	NA	5863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTAAAGCACTAATTGC	NA	NA	NA	NA	NA	NA	NA	NA	41471964	41550569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41546749
ENSMUSG00000025019.18_41516471_41540955_1	chr19	+	336	4	ISM	ENSMUSG00000025019.18	ENST00000675971.1	4658	7	44816	9704	-21607	-7265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTGCTGCTGAATATAC	NA	NA	NA	NA	NA	NA	NA	NA	41516470	41540955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41516526_41516999_41517080_41534313_41534447_41540887
ENSMUSG00000025019.18_41516998_41550700_1	chr19	+	4548	5	ISM	ENSMUSG00000025019.18	ENST00000676381.1	2291	8	45350	-22	-21080	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	5847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAAAAAAATACAAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	41516997	41550700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41546749
ENSMUSG00000025019.18_41540989_41550215_1	chr19	+	1056	4	ISM	ENSMUSG00000025019.18	ENST00000676381.1	2291	8	69341	463	2911	-444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGAGAACTTGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	41540988	41550215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41541176_41544046_41544141_41546749_41547469_41550159
ENSMUSG00000025019.18_41541043_41546876_1	chr19	+	354	3	FSM	ENSMUSG00000025019.18	ENSMUST00000163929.2	4663	3	2965	1344	2965	-1344	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCGATCTCTGCAGATTAG	NA	NA	NA	NA	NA	NA	NA	NA	41541042	41546876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_41541176_41544046_41544141_41546749
ENSMUSG00000025019.18_41541044_41550262_1	chr19	+	1048	4	ISM	ENSMUSG00000025019.18	ENST00000676381.1	2291	8	69396	416	2966	-397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAGTGAAAATTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	41541043	41550262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41541176_41544046_41544141_41546749_41547469_41550159
ENSMUSG00000025019.18_41546841_41550700_1	chr19	+	1169	2	ISM	ENSMUSG00000025019.18	ENST00000676381.1	2291	8	75193	-22	8763	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAAAAAAATACAAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	41546840	41550700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41547469_41550159
ENSMUSG00000025019.18_41546932_41550700_1	chr19	+	1078	2	ISM	ENSMUSG00000025019.18	ENST00000676381.1	2291	8	75284	-22	8854	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAAAAAAATACAAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	41546931	41550700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41547469_41550159
ENSMUSG00000025019.18_41546992_41550251_1	chr19	+	352	2	ISM	ENSMUSG00000025019.18	ENST00000676414.1	1876	9	75850	466	8914	-408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGCTGTAAATAGTG	NA	NA	NA	NA	NA	NA	NA	NA	41546991	41550251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41547252_41550159
ENSMUSG00000025019.18_41547062_41550521_1	chr19	+	932	2	ISM	ENSMUSG00000025019.18	ENST00000540664.6	2256	9	75920	196	8984	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTTCTTTCTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	41547061	41550521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41547632_41550159
ENSMUSG00000025019.18_41547070_41550289_1	chr19	+	312	2	ISM	ENSMUSG00000025019.18	ENST00000676414.1	1876	9	75928	428	8992	-370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTTGGTTAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	41547069	41550289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41547252_41550159
ENSMUSG00000025019.18_41547104_41550587_1	chr19	+	956	2	ISM	ENSMUSG00000025019.18	ENST00000540664.6	2256	9	75962	130	9026	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTACATTGGTAACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	41547103	41550587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41547632_41550159
ENSMUSG00000025019.18_41547117_41550353_1	chr19	+	329	2	ISM	ENSMUSG00000025019.18	ENST00000676414.1	1876	9	75975	364	9039	-306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTGAGACCTGAAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	41547116	41550353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41547252_41550159
ENSMUSG00000025019.18_41547264_41550700_1	chr19	+	909	2	ISM	ENSMUSG00000025019.18	ENST00000540664.6	2256	9	76122	17	9186	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAAAAAAATACAAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	41547263	41550700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41547632_41550159
ENSMUSG00000025019.18_41547657_41550242_1	chr19	+	180	2	ISM	ENSMUSG00000025019.18	ENST00000675537.1	2435	9	76107	425	9579	-417	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTGTAGGCTGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	41547656	41550242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41547754_41550159
ENSMUSG00000025019.18_41547715_41550289_1	chr19	+	169	2	ISM	ENSMUSG00000025019.18	ENST00000675537.1	2435	9	76165	378	9637	-370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTTGGTTAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	41547714	41550289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41547754_41550159
ENSMUSG00000025024.8_53367821_53369740_1	chr19	-	1281	2	ISM	ENSMUSG00000025024.8	ENSMUST00000237529.2	1480	6	8732	-490	8732	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTTAACAAAGGGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	53369740	53367820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_53369033_53369671
ENSMUSG00000025024.8_53368104_53372124_1	chr19	-	1220	3	ISM	ENSMUSG00000025024.8	ENSMUST00000237529.2	1480	6	6348	-207	6348	207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGATTAAATTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	53372124	53368103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_53369033_53369671_53369826_53371987
ENSMUSG00000025024.8_53368428_53378472_1	chr19	-	1363	6	FSM	ENSMUSG00000025024.8	ENSMUST00000237529.2	1480	6	0	117	0	-117	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGTTTATTTTGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	53378472	53368427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378293
ENSMUSG00000025024.8_53368505_53379009_1	chr19	-	1270	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	0	678	0	-194	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGCTAAAGAGAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	53379009	53368504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
ENSMUSG00000025024.8_53368538_53379009_1	chr19	-	1237	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	0	711	0	-227	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGTTCATTGGAACATG	NA	NA	NA	NA	NA	NA	NA	NA	53379009	53368537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
ENSMUSG00000025027.19_52979611_53020576_1	chr19	-	2356	19	ISM	ENSMUSG00000025027.19	ENST00000322238.12	2384	20	6459	-15	0	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	53020576	52979610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52990904_52990979_52991105_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439
ENSMUSG00000025027.19_52979611_53026984_1	chr19	-	2267	19	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	53026984	52979610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53013689_53013815_53026944
ENSMUSG00000025027.19_52979611_53027072_1	chr19	-	2503	21	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-37	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1866	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	53027072	52979610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026949
ENSMUSG00000025027.19_52979611_53027072_2	chr19	-	2507	21	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-37	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	53027072	52979610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990976_52991103_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ENSMUSG00000025027.19_52979611_53027072_3	chr19	-	2508	21	FSM	ENSMUSG00000025027.19	ENSMUST00000183108.8	4078	21	1573	-3	-37	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	53027072	52979610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ENSMUSG00000025027.19_52979611_53027072_4	chr19	-	2502	21	NNC	ENSMUSG00000025027.19	novel	2456	21	NA	NA	-37	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	53027072	52979610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988825_52988892_52990904_52990979_52991105_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ENSMUSG00000025027.19_52979744_53027011_1	chr19	-	2242	20	FSM	ENSMUSG00000025027.19	ENST00000322238.12	2384	20	24	118	24	-118	multi-exon	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGGCCAGGGATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	53027011	52979743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52990904_52990979_52991105_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ENSMUSG00000025027.19_52980067_53027603_1	chr19	-	2583	21	FSM	ENSMUSG00000025027.19	ENSMUST00000183108.8	4078	21	1042	453	-568	-441	multi-exon	FALSE	canonical	NA	NA	NA	NA	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGGCTCATCAGAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	53027603	52980066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ENSMUSG00000025027.19_52983795_53027721_1	chr19	-	2674	20	ISM	ENSMUSG00000025027.19	ENSMUST00000183108.8	4078	21	924	4181	-686	-4169	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTGGTCCATTCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	53027721	52983794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ENSMUSG00000025027.19_52983935_53027774_1	chr19	-	2587	20	ISM	ENSMUSG00000025027.19	ENSMUST00000183108.8	4078	21	871	4321	-739	-4309	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAGCCTGACCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	53027774	52983934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ENSMUSG00000025027.19_52985403_53027924_1	chr19	-	2572	18	ISM	ENSMUSG00000025027.19	ENSMUST00000183108.8	4078	21	721	5789	721	-5777	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCCCTGTGGCATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	53027924	52985402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ENSMUSG00000025027.19_52985459_53027973_1	chr19	-	2565	18	ISM	ENSMUSG00000025027.19	ENSMUST00000183108.8	4078	21	672	5845	672	-5833	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGATTACCTGCATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	53027973	52985458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ENSMUSG00000025035.10_46519535_46531971_1	chr19	-	528	3	ISM	ENSMUSG00000025035.10	ENSMUST00000026009.10	843	6	29561	0	29561	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAAATGTCTCAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	46531971	46519534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46519826_46530790_46530977_46531920
ENSMUSG00000025035.10_46519535_46561515_1	chr19	-	894	7	FSM	ENSMUSG00000025035.10	ENSMUST00000236255.2	1005	7	122	-11	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAAATGTCTCAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	46561515	46519534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_46519826_46529881_46529950_46530790_46530977_46531920_46531972_46540011_46540129_46546676_46546821_46561478
ENSMUSG00000025035.10_46519754_46546831_1	chr19	-	581	5	ISM	ENSMUSG00000025035.10	ENSMUST00000026009.10	843	6	14701	219	14701	-208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCCGGGAGCTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	46546831	46519753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46519826_46530790_46530977_46531920_46531972_46540011_46540129_46546676
ENSMUSG00000025035.10_46519754_46561515_1	chr19	-	607	6	FSM	ENSMUSG00000025035.10	ENSMUST00000026009.10	843	6	17	219	17	-208	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCCGGGAGCTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	46561515	46519753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_46519826_46530790_46530977_46531920_46531972_46540011_46540129_46546676_46546821_46561478
ENSMUSG00000025037.7_16486083_16505364_1	chrX	+	227	3	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	146	48693	146	-48693	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACGCTTGTCTAAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	16486082	16505364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_16486153_16500420_16500516_16505302
ENSMUSG00000025037.7_16505379_16525734_1	chrX	+	218	3	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	19442	28323	19442	-28323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACCATGAAAGATCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	16505378	16525734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_16505441_16524806_16524912_16525683
ENSMUSG00000025037.7_16528599_16531002_1	chrX	+	212	2	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	42662	23055	42662	-23055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCATTATAGAAACACTGA	NA	NA	NA	NA	NA	NA	NA	NA	16528598	16531002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_16528698_16530889
ENSMUSG00000025037.7_16539138_16548490_1	chrX	+	208	4	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	53201	5567	53201	-5567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTACACAGCCTACTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	16539137	16548490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_16539183_16543793_16543848_16547052_16547111_16548439
ENSMUSG00000025037.7_16548491_16551283_1	chrX	+	222	3	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	62554	2774	62554	-2774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTGATTACTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	16548490	16551283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_16548538_16550202_16550315_16551220
ENSMUSG00000025037.7_16550252_16551550_1	chrX	+	206	3	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	64315	2507	64315	-2507	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCACTTCTGTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	16550251	16551550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_16550315_16551220_16551284_16551470
ENSMUSG00000025040.14_17422803_17438564_2	chrX	-	1976	5	NNC	ENSMUSG00000025040.14	novel	1983	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGCTTATATATCC	NA	NA	NA	NA	NA	NA	NA	NA	17438564	17422802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_17424244_17424919_17425049_17434271_17434348_17437541_17437699_17438391
ENSMUSG00000025040.14_17422803_17438564_3	chrX	-	1975	5	NNC	ENSMUSG00000025040.14	novel	1983	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	961	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGCTTATATATCC	NA	NA	NA	NA	NA	NA	NA	NA	17438564	17422802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_17424251_17424919_17425049_17434271_17434340_17437541_17437699_17438391
ENSMUSG00000025040.14_17422803_17438564_4	chrX	-	1975	5	NNC	ENSMUSG00000025040.14	novel	1983	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGCTTATATATCC	NA	NA	NA	NA	NA	NA	NA	NA	17438564	17422802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_17424251_17424919_17425041_17434271_17434348_17437541_17437699_17438391
ENSMUSG00000025041.18_46876713_46878568_1	chr19	-	867	3	ISM	ENSMUSG00000025041.18	ENST00000675645.1	2161	18	72206	0	47476	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCATTCGGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	46878568	46876712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46877491_46878208_46878237_46878507
ENSMUSG00000025041.18_46876713_46926012_1	chr19	-	2408	17	FSM	ENSMUSG00000025041.18	ENST00000675985.1	2440	17	32	0	32	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCATTCGGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	46926012	46876712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46925730
ENSMUSG00000025041.18_46876713_47003207_1	chr19	-	2410	19	FSM	ENSMUSG00000025041.18	ENST00000676428.1	2458	19	48	0	37	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCATTCGGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	47003207	46876712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46979402_46979496_47003136
ENSMUSG00000025041.18_46876713_47003207_2	chr19	-	2448	19	FSM	ENSMUSG00000025041.18	ENST00000675326.1	2485	19	37	0	37	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCATTCGGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	47003207	46876712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46956280_46956382_47003106
ENSMUSG00000025041.18_46876713_47003207_3	chr19	-	2399	19	NNC	ENSMUSG00000025041.18	novel	2458	19	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCATTCGGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	47003207	46876712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46940551_46940634_47003136
ENSMUSG00000025041.18_46876713_47003207_4	chr19	-	2409	19	NNC	ENSMUSG00000025041.18	novel	2458	19	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCATTCGGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	47003207	46876712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46979402_46979496_47003137
ENSMUSG00000025041.18_46876913_46880035_1	chr19	-	807	5	ISM	ENSMUSG00000025041.18	ENST00000675645.1	2161	18	70739	200	46009	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGGTAGGAAGAGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	46880035	46876912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46877491_46878208_46878237_46878507_46878569_46878684_46878737_46879947
ENSMUSG00000025041.18_46877080_46880965_1	chr19	-	812	7	ISM	ENSMUSG00000025041.18	ENST00000675645.1	2161	18	69809	367	45079	-367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTGCAGATGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	46880965	46877079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46877491_46878208_46878237_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943
ENSMUSG00000025041.18_46877268_46883022_1	chr19	-	815	9	ISM	ENSMUSG00000025041.18	ENST00000675645.1	2161	18	67752	555	43022	-555	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAGAATAGGAAGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	46883022	46877267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46877491_46878208_46878237_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959
ENSMUSG00000025041.18_46882960_46950747_1	chr19	-	827	10	ISM	ENSMUSG00000025041.18	ENST00000675645.1	2161	18	27	6247	0	-6247	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTTAGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46950747	46882959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
ENSMUSG00000025060.16_47609287_47631230_1	chr19	+	2069	10	ISM	ENSMUSG00000025060.16	ENSMUST00000026043.12	7278	18	41170	2455	40829	336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTGTTTTAAAAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	47609286	47631230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ENSMUSG00000025066.11_47720121_47724028_1	chr19	+	1650	4	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5979	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCATATCCTTATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	47720120	47724028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_47720261_47721076_47721428_47721957_47722351_47723262
ENSMUSG00000025068.9_47843409_47852783_1	chr19	+	736	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	0	446	0	-446	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGACCCTGTGGCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	47843408	47852783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
ENSMUSG00000025068.9_47843653_47853006_1	chr19	+	807	5	ISM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	244	223	244	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCAGGGCCCCACTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	47843652	47853006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
ENSMUSG00000025068.9_47846297_47853006_1	chr19	+	698	4	ISM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	2888	223	2888	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCAGGGCCCCACTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	47846296	47853006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_47846521_47847870_47847970_47851817_47851922_47852735
ENSMUSG00000025068.9_47846385_47853094_1	chr19	+	690	4	NNC	ENSMUSG00000025068.9	novel	1182	6	NA	NA	2976	-135	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGGTTTGATACAGACA	NA	NA	NA	NA	NA	NA	NA	NA	47846384	47853094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_47846521_47847870_47847970_47851817_47851922_47852743
ENSMUSG00000025068.9_47847869_47853229_1	chr19	+	699	3	ISM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	4460	0	4460	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTCCAAACCACCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	47847868	47853229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_47847970_47851817_47851922_47852735
ENSMUSG00000025077.14_56519700_56533026_1	chr19	-	1366	7	ISM	ENSMUSG00000025077.14	ENSMUST00000182276.2	4066	10	3628	2099	3628	-2099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCACAGCGGATATTATT	NA	NA	NA	NA	NA	NA	NA	NA	56533026	56519699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446
ENSMUSG00000025077.14_56528655_56533465_1	chr19	-	1372	4	ISM	ENSMUSG00000025077.14	ENSMUST00000182276.2	4066	10	3189	11054	3189	-11054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCGGGCCGCAAAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	56533465	56528654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56528755_56529936_56530056_56531064_56531199_56532446
ENSMUSG00000025077.14_56532805_56535159_1	chr19	-	1365	2	ISM	ENSMUSG00000025077.14	ENSMUST00000182276.2	4066	10	1495	15204	1495	-15204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCCAACCAAAAGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	56535159	56532804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56534079_56535068
ENSMUSG00000025077.14_56533145_56535587_1	chr19	-	1453	2	ISM	ENSMUSG00000025077.14	ENSMUST00000182276.2	4066	10	1067	15544	1067	-15544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTTACTTACAAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	56535587	56533144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56534079_56535068
ENSMUSG00000025077.14_56533212_56535587_1	chr19	-	1386	2	ISM	ENSMUSG00000025077.14	ENSMUST00000182276.2	4066	10	1067	15611	1067	-15611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCACTTGCATCAAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	56535587	56533211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56534079_56535068
ENSMUSG00000025082.9_56882247_56886452_1	chr19	+	208	2	ISM	ENSMUSG00000025082.9	ENST00000603594.2	1872	8	49	11373	49	-11373	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGGGCATCGTCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	56882246	56886452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_56882308_56886305
ENSMUSG00000025082.9_56886370_56890035_1	chr19	+	204	2	ISM	ENSMUSG00000025082.9	ENST00000603594.2	1872	8	4172	7790	4172	-7790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATGGCCTCCTCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	56886369	56890035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_56886498_56889959
ENSMUSG00000025082.9_56886443_56890700_1	chr19	+	222	3	ISM	ENSMUSG00000025082.9	ENST00000603594.2	1872	8	4245	7125	4245	-7125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGCTGGAGACCGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	56886442	56890700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_56886498_56889959_56890094_56890667
ENSMUSG00000025082.9_56890783_56894860_1	chr19	+	221	4	ISM	ENSMUSG00000025082.9	ENSMUST00000026068.8	4049	14	28102	5650	8585	-2965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTGGACAGTTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	56890782	56894860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_56890801_56891898_56891955_56893910_56894019_56894821
ENSMUSG00000025082.9_56893909_56894921_1	chr19	+	214	2	ISM	ENSMUSG00000025082.9	ENST00000603594.2	1872	8	11711	2904	11711	-2904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCGCTTTGTGCAGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	56893908	56894921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_56894023_56894821
ENSMUSG00000025082.9_56895250_56897321_1	chr19	+	203	2	ISM	ENSMUSG00000025082.9	ENST00000603594.2	1872	8	13052	504	13052	-504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTGAGAACTTTGCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	56895249	56897321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_56895395_56897263
ENSMUSG00000025082.9_56895306_56897391_1	chr19	+	217	2	ISM	ENSMUSG00000025082.9	ENST00000603594.2	1872	8	13108	434	13108	-434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACACAGGTTGGCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	56895305	56897391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_56895395_56897263
ENSMUSG00000025082.9_56895355_56897445_1	chr19	+	222	2	ISM	ENSMUSG00000025082.9	ENST00000603594.2	1872	8	13157	380	13157	-380	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGACACCCATCCCACCCG	NA	NA	NA	NA	NA	NA	NA	NA	56895354	56897445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_56895395_56897263
ENSMUSG00000025083.19_56902603_56905644_1	chr19	-	950	6	ISM	ENSMUSG00000025083.19	ENSMUST00000118800.8	3531	19	90986	1810	90986	-1810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGTCATGGTCACAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	56905644	56902602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557
ENSMUSG00000025085.17_57025298_57049814_1	chr19	-	1387	11	ISM	ENSMUSG00000025085.17	ENST00000533213.6	2455	21	112079	-1	57531	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGAGGGGATGCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	57049814	57025297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57025770_57027838_57027920_57028918_57029008_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684
ENSMUSG00000025085.17_57025436_57052235_1	chr19	-	1287	12	ISM	ENSMUSG00000025085.17	ENST00000533213.6	2455	21	109658	137	55110	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCAGTAACGTCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	57052235	57025435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57025770_57027838_57027920_57028918_57029008_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197
ENSMUSG00000025085.17_57025436_57056678_1	chr19	-	1441	13	ISM	ENSMUSG00000025085.17	ENST00000533213.6	2455	21	105215	137	50667	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCAGTAACGTCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	57056678	57025435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57025770_57027838_57027920_57028918_57029008_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522
ENSMUSG00000025085.17_57025436_57057374_1	chr19	-	1515	14	ISM	ENSMUSG00000025085.17	ENST00000392955.7	2446	21	104519	137	49971	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCAGTAACGTCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	57057374	57025435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291
ENSMUSG00000025085.17_57025572_57057374_1	chr19	-	1388	14	ISM	ENSMUSG00000025085.17	ENST00000533213.6	2455	21	104519	273	49971	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATTTGTTCACCACCGT	NA	NA	NA	NA	NA	NA	NA	NA	57057374	57025571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57025770_57027838_57027920_57028918_57029008_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291
ENSMUSG00000025085.17_57025572_57072037_1	chr19	-	1523	16	ISM	ENSMUSG00000025085.17	ENST00000392955.7	2446	21	89856	273	35308	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATTTGTTCACCACCGT	NA	NA	NA	NA	NA	NA	NA	NA	57072037	57025571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947
ENSMUSG00000025085.17_57025683_57072037_1	chr19	-	1421	16	ISM	ENSMUSG00000025085.17	ENST00000533213.6	2455	21	89856	384	35308	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAAGAAAAAAGCTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	57072037	57025682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57025770_57027838_57027920_57028918_57029008_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947
ENSMUSG00000025085.17_57025683_57121387_1	chr19	-	1504	17	ISM	ENSMUSG00000025085.17	ENST00000392955.7	2446	21	40506	384	-13946	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAAGAAAAAAGCTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	57121387	57025682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293
ENSMUSG00000025085.17_57027879_57072037_2	chr19	-	1294	15	ISM	ENSMUSG00000025085.17	ENST00000533213.6	2455	21	89856	2580	35308	-2265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAAAATCCTGAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	57072037	57027878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57027920_57028918_57029008_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947
ENSMUSG00000025085.17_57027879_57121387_1	chr19	-	1386	16	ISM	ENSMUSG00000025085.17	ENST00000533213.6	2455	21	40506	2580	-13946	-2265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAAAATCCTGAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	57121387	57027878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57027920_57028918_57029008_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293
ENSMUSG00000025085.17_57027879_57123145_1	chr19	-	1509	17	ISM	ENSMUSG00000025085.17	ENST00000392955.7	2446	21	38748	2580	-15704	-2265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAAAATCCTGAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	57123145	57027878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013
ENSMUSG00000025085.17_57028970_57123109_1	chr19	-	1390	16	ISM	ENSMUSG00000025085.17	ENST00000533213.6	2455	21	38784	3671	-15668	-3356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTGAGAATGGACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	57123109	57028969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57029008_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013
ENSMUSG00000025085.17_57031435_57143647_1	chr19	-	1490	16	ISM	ENSMUSG00000025085.17	ENST00000392955.7	2446	21	18246	6136	18246	-5821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGGGTAAGACCTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	57143647	57031434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583
ENSMUSG00000025085.17_57032228_57140814_1	chr19	-	1367	14	ISM	ENSMUSG00000025085.17	ENST00000392955.7	2446	21	21079	6929	21079	-6614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCAGCACCCGTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	57140814	57032227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704
ENSMUSG00000025085.17_57032228_57143767_1	chr19	-	1551	15	ISM	ENSMUSG00000025085.17	ENST00000392955.7	2446	21	18126	6929	18126	-6614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCAGCACCCGTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	57143767	57032227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583
ENSMUSG00000025085.17_57033313_57143697_1	chr19	-	1378	14	ISM	ENSMUSG00000025085.17	ENST00000392955.7	2446	21	18196	8014	18196	-7699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTCCATGAGGCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	57143697	57033312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583
ENSMUSG00000025085.17_57035401_57161816_1	chr19	-	1372	14	ISM	ENSMUSG00000025085.17	ENST00000392955.7	2446	21	77	10102	77	-9787	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACGGACCACTGGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	57161816	57035400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583_57143768_57161756
ENSMUSG00000025085.17_57035442_57204208_1	chr19	-	1469	15	ISM	ENSMUSG00000025085.17	ENST00000277895.9	2559	22	189	10006	189	-9828	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAGCCCAGGCGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	57204208	57035441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583_57143768_57161756_57161892_57204145
ENSMUSG00000025085.17_57039562_57204397_1	chr19	-	1554	13	ISM	ENSMUSG00000025085.17	ENST00000277895.9	2559	22	0	14126	0	-13948	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAGCTGACACAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	57204397	57039561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583_57143768_57161756_57161892_57204145
ENSMUSG00000025089.16_58224991_58442898_1	chr19	-	3342	9	FSM	ENSMUSG00000025089.16	ENSMUST00000129100.8	4415	9	126	947	0	133	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATCAGTGGGACGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	58442898	58224990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_58226979_58227685_58227740_58252343_58252526_58255430_58255566_58258485_58258596_58288673_58289011_58440400_58440485_58441595_58441890_58442740
ENSMUSG00000025091.5_58748864_58750123_1	chr19	+	202	2	ISM	ENSMUSG00000025091.5	ENST00000579578.6	1014	8	81	9771	81	-9771	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTATCCGTCCTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	58748863	58750123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_58748940_58749997
ENSMUSG00000025091.5_58748864_58759899_1	chr19	+	938	8	FSM	ENSMUSG00000025091.5	ENST00000611850.4	1018	8	81	-1	81	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	7101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCATTTTACTTACCAT	NA	NA	NA	NA	NA	NA	NA	NA	58748863	58759899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_58748940_58749997_58750124_58750681_58750817_58751760_58751873_58753159_58753280_58754693_58754828_58757013_58757115_58759765
ENSMUSG00000025091.5_58750742_58751873_1	chr19	+	188	2	ISM	ENSMUSG00000025091.5	ENST00000579578.6	1014	8	1959	8021	1959	-8021	internal_fragment	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGTCATGGGAGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	58750741	58751873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_58750817_58751760
ENSMUSG00000025091.5_58751760_58753225_1	chr19	+	179	2	ISM	ENSMUSG00000025091.5	ENST00000579578.6	1014	8	2977	6669	2977	-6669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTTGTAGACGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	58751759	58753225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_58751873_58753159
ENSMUSG00000025091.5_58751844_58754712_1	chr19	+	168	3	ISM	ENSMUSG00000025091.5	ENST00000579578.6	1014	8	3061	5182	3061	-5182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGGCCATCTGGATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	58751843	58754712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_58751873_58753159_58753280_58754693
ENSMUSG00000025091.5_58754785_58759784_1	chr19	+	163	3	ISM	ENSMUSG00000025091.5	ENST00000579578.6	1014	8	6002	110	6002	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAACAAGGGTGTCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	58754784	58759784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_58754828_58757013_58757115_58759765
ENSMUSG00000025102.15_81432182_81438235_1	chr7	-	422	4	ISM	ENSMUSG00000025102.15	ENSMUST00000026092.9	887	5	991	252	991	-252	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTCTCCTAATTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	81438235	81432181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197
ENSMUSG00000025102.15_81432236_81438284_1	chr7	-	417	4	ISM	ENSMUSG00000025102.15	ENSMUST00000026092.9	887	5	942	306	942	-306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACTCCGAGTGAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	81438284	81432235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197
ENSMUSG00000025103.9_81442087_81444008_1	chr7	-	1491	2	ISM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	35171	265	35171	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCTCAGTTAGCGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	81444008	81442086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81443475_81443905
ENSMUSG00000025103.9_81442299_81450787_1	chr7	-	1493	4	ISM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	28392	477	28392	-477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATAGTTGTGGGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	81450787	81442298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705
ENSMUSG00000025103.9_81442429_81455528_1	chr7	-	1513	5	ISM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	23651	607	23651	-607	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTGTGACATTTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	81455528	81442428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489
ENSMUSG00000025103.9_81442484_81455582_1	chr7	-	1512	5	ISM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	23597	662	23597	-662	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTTCCACCCAAGAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	81455582	81442483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489
ENSMUSG00000025103.9_81442660_81465747_1	chr7	-	1526	6	ISM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	13432	838	13432	-838	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGATGACTGAGATGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	81465747	81442659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662
ENSMUSG00000025103.9_81442783_81468016_1	chr7	-	1498	7	ISM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	11163	961	11163	-961	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAGCTGGAAGTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	81468016	81442782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942
ENSMUSG00000025104.14_81533665_81535658_1	chr7	-	1821	2	ISM	ENSMUSG00000025104.14	ENST00000299633.7	5528	7	48491	2552	48491	-2552	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAAGTTTTGACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	81535658	81533664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81533875_81534047
ENSMUSG00000025104.14_81534608_81583771_1	chr7	-	1828	6	FSM	ENSMUSG00000025104.14	ENSMUST00000107305.8	5887	6	450	3609	378	-3495	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCTTTTTAAGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	81583771	81534607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_81535832_81543546_81543694_81549421_81549578_81550032_81550172_81555307_81555385_81583686
ENSMUSG00000025127.16_120425793_120428987_3	chr11	+	1257	9	FSM	ENSMUSG00000025127.16	ENST00000570996.5	1311	9	55	-1	55	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAAGCTGGGAACACAAT	NA	NA	NA	NA	NA	NA	NA	NA	120425792	120428987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120425845_120426885_120426994_120427070_120427193_120427287_120427395_120427482_120427881_120427954_120428016_120428144_120428215_120428528_120428618_120428737
ENSMUSG00000025129.3_120441027_120441843_1	chr11	-	580	3	NNC	ENSMUSG00000025129.3	novel	623	3	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGCCCTTTGGGGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	120441843	120441026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_120441303_120441437_120441589_120441690
ENSMUSG00000025129.3_120441027_120441843_2	chr11	-	581	3	FSM	ENSMUSG00000025129.3	ENST00000570394.1	623	3	42	0	42	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGCCCTTTGGGGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	120441843	120441026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120441303_120441437_120441589_120441689
ENSMUSG00000025130.12_120451131_120454149_1	chr11	-	1413	5	ISM	ENSMUSG00000025130.12	ENST00000681020.1	2358	11	9535	-49	9491	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCATTGTCACTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120454149	120451130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120452029_120452980_120453074_120453189_120453372_120453480_120453602_120454030
ENSMUSG00000025130.12_120451131_120463674_1	chr11	-	2317	10	FSM	ENSMUSG00000025130.12	ENST00000439918.7	2320	10	52	-49	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCATTGTCACTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120463674	120451130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120462344_120462554_120463482
ENSMUSG00000025130.12_120451131_120463726_1	chr11	-	2369	10	FSM	ENSMUSG00000025130.12	ENST00000439918.7	2320	10	0	-49	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCATTGTCACTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120463726	120451130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120462344_120462554_120463482
ENSMUSG00000025130.12_120451771_120454190_1	chr11	-	866	5	ISM	ENSMUSG00000025130.12	ENST00000681693.1	2333	11	9450	639	9450	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGGTGGTGTACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	120454190	120451770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030
ENSMUSG00000025130.12_120451946_120462405_1	chr11	-	1294	10	ISM	ENSMUSG00000025130.12	ENST00000680191.1	2507	11	1279	803	1235	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCCGGAGCCTGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	120462405	120451945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346
ENSMUSG00000025130.12_120451987_120454521_1	chr11	-	784	6	ISM	ENSMUSG00000025130.12	ENST00000681693.1	2333	11	9119	855	9119	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACCCAAAACCTCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	120454521	120451986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428
ENSMUSG00000025130.12_120451991_120462462_1	chr11	-	1306	10	ISM	ENSMUSG00000025130.12	ENST00000680191.1	2507	11	1222	848	1178	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCCTGAACCCAAAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	120462462	120451990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346
ENSMUSG00000025130.12_120453282_120463667_1	chr11	-	1367	9	ISM	ENSMUSG00000025130.12	ENST00000680191.1	2507	11	17	2139	0	-1488	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGATGGACTCAACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	120463667	120453281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463422
ENSMUSG00000025130.12_120454130_120462503_1	chr11	-	762	6	ISM	ENSMUSG00000025130.12	ENST00000570907.6	1907	10	1176	2336	1137	-2336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGAGGAAGAGATGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	120462503	120454129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346
ENSMUSG00000025130.12_120454172_120463547_1	chr11	-	835	7	ISM	ENSMUSG00000025130.12	ENST00000570907.6	1907	10	132	2378	93	-2378	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCTGAAGAAGGAGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	120463547	120454171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ENSMUSG00000025130.12_120454489_120463667_1	chr11	-	835	6	ISM	ENSMUSG00000025130.12	ENST00000570907.6	1907	10	12	2695	0	-2695	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGACTATGACGGCAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	120463667	120454488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ENSMUSG00000025130.12_120459039_120463963_1	chr11	-	783	3	ISM	ENSMUSG00000025130.12	ENST00000570907.6	1907	10	-284	7245	116	-7245	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGACTCAAGCGAAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	120463963	120459038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120459134_120462346_120462554_120463482
ENSMUSG00000025130.12_120462347_120464079_1	chr11	-	804	2	ISM	ENSMUSG00000025130.12	ENST00000570907.6	1907	10	-400	10553	0	-10553	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGACCCTAGAACTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	120464079	120462346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120462554_120463482
ENSMUSG00000025132.14_120468930_120471169_1	chr11	-	1714	5	ISM	ENSMUSG00000025132.14	ENSMUST00000067936.6	2150	6	1037	-5	31	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	11414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGGTCTGTGCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	120471169	120468929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007
ENSMUSG00000025132.14_120468930_120471169_2	chr11	-	1711	5	NNC	ENSMUSG00000025132.14	novel	1867	6	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGGTCTGTGCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	120471169	120468929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_120470257_120470341_120470398_120470488_120470571_120470792_120470877_120471007
ENSMUSG00000025132.14_120469128_120472450_1	chr11	-	1669	6	FSM	ENSMUSG00000025132.14	ENSMUST00000106197.10	1867	6	0	198	0	-193	multi-exon	FALSE	canonical	NA	NA	NA	NA	4369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGCCGACCCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	120472450	120469127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120472347
ENSMUSG00000025132.14_120469576_120472206_1	chr11	-	1427	6	FSM	ENSMUSG00000025132.14	ENST00000541078.6	1357	6	-70	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGCTAACTCTTAACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	120472206	120469575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471327_120472004
ENSMUSG00000025132.14_120469826_120471220_1	chr11	-	644	2	FSM	ENSMUSG00000025132.14	ENST00000581876.5	624	2	-20	0	-20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCCAGCCCAGGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	120471220	120469825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120470257_120471007
ENSMUSG00000025133.10_97150986_97180019_1	chr7	+	1211	10	NNC	ENSMUSG00000025133.10	novel	1260	10	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATTTTGTAACTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	97150985	97180019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_97151056_97155270_97155343_97156922_97157093_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97178420_97178502_97179958
ENSMUSG00000025133.10_97150986_97180019_2	chr7	+	1216	10	FSM	ENSMUSG00000025133.10	ENST00000587624.6	1260	10	44	0	44	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATTTTGTAACTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	97150985	97180019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97178420_97178502_97179958
ENSMUSG00000025133.10_97150986_97180019_3	chr7	+	1209	10	NNC	ENSMUSG00000025133.10	novel	1260	10	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATTTTGTAACTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	97150985	97180019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_97151056_97155270_97155343_97156922_97157098_97158797_97158997_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97178420_97178502_97179958
ENSMUSG00000025133.10_97150986_97180019_4	chr7	+	1209	10	NNC	ENSMUSG00000025133.10	novel	1260	10	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATTTTGTAACTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	97150985	97180019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168261_97168413_97178420_97178502_97179958
ENSMUSG00000025133.10_97150986_97180019_5	chr7	+	1211	10	NNC	ENSMUSG00000025133.10	novel	1260	10	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATTTTGTAACTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	97150985	97180019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97178420_97178502_97179963
ENSMUSG00000025134.3_120482947_120489057_1	chr11	-	3393	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	134	0	134	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATCACACCTCGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	120489057	120482946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ENSMUSG00000025135.13_120489266_120497499_1	chr11	+	1685	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	19	1525	19	897	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGCCTTCCATCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	120489265	120497499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120489431_120490067_120490195_120496106
ENSMUSG00000025135.13_120489358_120496602_1	chr11	+	955	3	NNC	ENSMUSG00000025135.13	novel	962	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAAACCTTCATCGTA	NA	NA	NA	NA	NA	NA	NA	NA	120489357	120496602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_120489697_120490074_120490195_120496106
ENSMUSG00000025135.13_120489358_120496602_2	chr11	+	957	3	NNC	ENSMUSG00000025135.13	novel	962	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	998	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAAACCTTCATCGTA	NA	NA	NA	NA	NA	NA	NA	NA	120489357	120496602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_120489697_120490067_120490195_120496111
ENSMUSG00000025135.13_120489358_120497553_1	chr11	+	1647	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	111	1471	0	951	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAGGAACATTCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	120489357	120497553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120489431_120490067_120490195_120496106
ENSMUSG00000025137.16_120502454_120504249_1	chr11	-	399	5	ISM	ENSMUSG00000025137.16	ENSMUST00000026129.16	1881	14	4513	1541	4502	-1211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGAACTGGGAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	120504249	120502453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120502532_120502826_120502910_120503288_120503428_120503855_120503910_120504204
ENSMUSG00000025137.16_120503289_120505223_1	chr11	-	390	5	ISM	ENSMUSG00000025137.16	ENSMUST00000026129.16	1881	14	3539	2376	3528	-2046	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCTCTGCTGCCCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	120505223	120503288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156
ENSMUSG00000025137.16_120503422_120506278_1	chr11	-	419	6	ISM	ENSMUSG00000025137.16	ENSMUST00000026129.16	1881	14	2484	2509	2473	-2179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGGCAGAGCCCCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	120506278	120503421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116
ENSMUSG00000025137.16_120504466_120506763_1	chr11	-	404	4	ISM	ENSMUSG00000025137.16	ENSMUST00000106188.4	1486	13	1988	3223	1988	-3223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCCAAACGGATGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	120506763	120504465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120504552_120505156_120505224_120506116_120506279_120506674
ENSMUSG00000025138.15_120509198_120515795_1	chr11	-	1679	10	NNC	ENSMUSG00000025138.15	novel	1727	10	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	120515795	120509197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_120509869_120510984_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
ENSMUSG00000025139.15_141435567_141443259_1	chr7	-	2768	2	ISM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	12965	247	12786	-247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGTGCGACTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	141443259	141435566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141438319_141443243
ENSMUSG00000025139.15_141435597_141443335_1	chr7	-	2814	2	ISM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	12889	277	12710	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGAGTGATGCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	141443335	141435596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141438319_141443243
ENSMUSG00000025139.15_141435698_141444497_1	chr7	-	2771	3	ISM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	11727	378	11548	-378	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGATGGCCTGGCCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	141444497	141435697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141438319_141443243_141443335_141444438
ENSMUSG00000025139.15_141435824_141445745_1	chr7	-	2764	4	ISM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	10479	504	10300	-504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTCTCACTGGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	141445745	141435823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720
ENSMUSG00000025139.15_141435973_141446498_1	chr7	-	2795	5	ISM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	9726	653	9547	-653	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCAGCGCCTGTGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	141446498	141435972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476
ENSMUSG00000025139.15_141436040_141446534_1	chr7	-	2764	5	ISM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	9690	720	9511	-720	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTGCTGTTTTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	141446534	141436039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476
ENSMUSG00000025139.15_141436092_141446587_1	chr7	-	2765	5	ISM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	9637	772	9458	-772	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATAGATTGAAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	141446587	141436091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476
ENSMUSG00000025139.15_141436195_141456152_1	chr7	-	2841	6	FSM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	72	875	0	-875	multi-exon	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAACTTACGACTGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	141456152	141436194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141456012
ENSMUSG00000025139.15_141436266_141456152_1	chr7	-	2770	6	FSM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	72	946	0	860	multi-exon	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTCTATAGGAAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	141456152	141436265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141456012
ENSMUSG00000025139.15_141436311_141456224_1	chr7	-	2797	6	FSM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	0	991	0	815	multi-exon	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTACGGAGGTATAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	141456224	141436310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141456012
ENSMUSG00000025139.15_141444558_141446558_1	chr7	-	116	2	ISM	ENSMUSG00000025139.15	ENST00000525159.5	525	4	9590	1309	9487	-1309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACATCACCATCCCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	141446558	141444557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141444592_141446476
ENSMUSG00000025140.16_120530242_120532077_1	chr11	-	1043	2	ISM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	2497	0	1975	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCCCAGAGCTCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	120532077	120530241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120531175_120531967
ENSMUSG00000025140.16_120530242_120532110_1	chr11	-	1076	2	ISM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	2464	0	1942	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCCCAGAGCTCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	120532110	120530241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120531175_120531967
ENSMUSG00000025140.16_120530479_120532539_1	chr11	-	1017	4	ISM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	2035	237	1513	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCTAGTTTCAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	120532539	120530478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475
ENSMUSG00000025140.16_120530547_120532603_1	chr11	-	1013	4	ISM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	1971	305	1449	-305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTAGGTGGCTTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	120532603	120530546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475
ENSMUSG00000025140.16_120530603_120532652_1	chr11	-	1006	4	ISM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	1922	361	1400	-361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGGGATATCACTTACA	NA	NA	NA	NA	NA	NA	NA	NA	120532652	120530602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475
ENSMUSG00000025140.16_120530723_120533055_1	chr11	-	1046	5	ISM	ENSMUSG00000025140.16	ENST00000619204.4	1055	8	1536	-292	997	292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACCTGAGAGACTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	120533055	120530722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940
ENSMUSG00000025140.16_120530798_120533086_1	chr11	-	1002	5	ISM	ENSMUSG00000025140.16	ENST00000619204.4	1055	8	1505	-217	966	217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGATGTTGCCCAGACAA	NA	NA	NA	NA	NA	NA	NA	NA	120533086	120530797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940
ENSMUSG00000025140.16_120530865_120533128_1	chr11	-	977	5	ISM	ENSMUSG00000025140.16	ENST00000619204.4	1055	8	1463	-150	924	150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGGGATCATGGATAA	NA	NA	NA	NA	NA	NA	NA	NA	120533128	120530864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940
ENSMUSG00000025140.16_120531015_120532699_1	chr11	-	477	3	ISM	ENSMUSG00000025140.16	ENST00000577756.5	794	6	1353	0	1353	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGCCAGCCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	120532699	120531014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120531175_120532254_120532348_120532475
ENSMUSG00000025140.16_120531015_120534595_1	chr11	-	1059	8	FSM	ENSMUSG00000025140.16	ENST00000619204.4	1055	8	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGCCAGCCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	120534595	120531014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534096_120534537
ENSMUSG00000025140.16_120531015_120534595_2	chr11	-	970	7	NNC	ENSMUSG00000025140.16	novel	962	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGCCAGCCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	120534595	120531014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_120531175_120531967_120532132_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534096_120534533
ENSMUSG00000025140.16_120531015_120534595_3	chr11	-	963	7	NNC	ENSMUSG00000025140.16	novel	962	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1932	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGCCAGCCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	120534595	120531014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_120531175_120531967_120532132_120532475_120532698_120532940_120533118_120533717_120533789_120533984_120534096_120534537
ENSMUSG00000025140.16_120531015_120534595_4	chr11	-	966	7	FSM	ENSMUSG00000025140.16	ENST00000403172.8	962	7	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGCCAGCCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	120534595	120531014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120531175_120531967_120532132_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534096_120534537
ENSMUSG00000025140.16_120531015_120534595_5	chr11	-	959	7	NNC	ENSMUSG00000025140.16	novel	962	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGCCAGCCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	120534595	120531014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_120531175_120531974_120532132_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534096_120534537
ENSMUSG00000025140.16_120531043_120532962_1	chr11	-	469	4	ISM	ENSMUSG00000025140.16	ENST00000577756.5	794	6	1090	28	1090	-28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGGTCCCAGCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	120532962	120531042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120531175_120532254_120532348_120532475_120532698_120532940
ENSMUSG00000025140.16_120531120_120532998_1	chr11	-	428	4	ISM	ENSMUSG00000025140.16	ENST00000577756.5	794	6	1054	105	1054	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTACTGGATAAGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	120532998	120531119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120531175_120532254_120532348_120532475_120532698_120532940
ENSMUSG00000025140.16_120531150_120533073_1	chr11	-	473	4	ISM	ENSMUSG00000025140.16	ENST00000577756.5	794	6	979	135	979	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACCATCTCTCCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	120533073	120531149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120531175_120532254_120532348_120532475_120532698_120532940
ENSMUSG00000025142.19_120563890_120600273_1	chr11	+	1776	16	NNC	ENSMUSG00000025142.19	novel	1798	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120563889	120600273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579365_120579443_120579774_120580230_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000025142.19_120563924_120600273_1	chr11	+	1749	16	NNC	ENSMUSG00000025142.19	novel	1798	16	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120563923	120600273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579443_120579774_120580230_120591969_120592110_120592310_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000025142.19_120563924_120600273_2	chr11	+	1751	16	NNC	ENSMUSG00000025142.19	novel	1798	16	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120563923	120600273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579443_120579774_120580230_120591969_120592110_120592306_120592389_120593311_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000025142.19_120563924_120600273_3	chr11	+	1750	16	NNC	ENSMUSG00000025142.19	novel	1798	16	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120563923	120600273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579443_120579777_120580230_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000025142.19_120563924_120600273_4	chr11	+	1747	16	NNC	ENSMUSG00000025142.19	novel	1798	16	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120563923	120600273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579437_120579774_120580230_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000025142.19_120563924_120600273_5	chr11	+	1753	16	FSM	ENSMUSG00000025142.19	ENST00000306739.9	1798	16	46	-1	34	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120563923	120600273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579443_120579774_120580230_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000025142.19_120563924_120600273_6	chr11	+	1751	16	NNC	ENSMUSG00000025142.19	novel	1798	16	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120563923	120600273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579443_120579774_120580230_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599757_120599826_120599896_120600073_120600169
ENSMUSG00000025142.19_120564863_120600273_1	chr11	+	1682	15	NNC	ENSMUSG00000025142.19	novel	1798	16	NA	NA	973	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120564862	120600273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579443_120579774_120580230_120591970_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000025147.8_141562770_141569909_1	chr7	-	765	3	ISM	ENSMUSG00000025147.8	ENSMUST00000209732.2	977	5	9903	-195	9903	195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGATGTTTTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	141569909	141562769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141563316_141563989_141564115_141569815
ENSMUSG00000025147.8_141562965_141614786_1	chr7	-	796	5	FSM	ENSMUSG00000025147.8	ENSMUST00000084418.4	1490	5	16	678	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTCTGTGTGTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	141614786	141562964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570081_141570243_141614721
ENSMUSG00000025150.11_120620315_120621929_1	chr11	-	916	7	ISM	ENSMUSG00000025150.11	ENSMUST00000026148.9	1110	8	1011	0	1011	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGCCATTGCACAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	120621929	120620314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120620652_120620740_120620859_120621082_120621148_120621249_120621350_120621443_120621487_120621570_120621726_120621831
ENSMUSG00000025150.11_120620315_120621931_1	chr11	-	904	6	NNC	ENSMUSG00000025150.11	novel	1110	8	NA	NA	1009	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGCCATTGCACAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	120621931	120620314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_120620652_120620740_120620859_120621082_120621148_120621249_120621379_120621570_120621726_120621831
ENSMUSG00000025150.11_120620605_120622940_2	chr11	-	820	8	FSM	ENSMUSG00000025150.11	ENSMUST00000026148.9	1110	8	0	290	0	-290	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCTCTACCAGTGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	120622940	120620604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120620652_120620740_120620859_120621082_120621148_120621249_120621350_120621443_120621487_120621570_120621726_120621831_120621930_120622746
ENSMUSG00000025151.17_93579082_93580948_1	chrX	-	752	4	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	4801	2	1167	-2	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGTGCTTCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	93580948	93579081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899
ENSMUSG00000025151.17_93579688_93581872_1	chrX	-	676	7	ISM	ENSMUSG00000025151.17	ENST00000485287.5	835	8	243	97	243	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTGAGTTTGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	93581872	93579687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93579852_93580479_93580627_93580895_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789
ENSMUSG00000025151.17_93579688_93582114_1	chrX	-	737	8	FSM	ENSMUSG00000025151.17	ENST00000485287.5	835	8	1	97	1	-97	multi-exon	FALSE	canonical	NA	NA	NA	NA	2721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTGAGTTTGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	93582114	93579687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_93579852_93580479_93580627_93580895_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050
ENSMUSG00000025151.17_93579688_93582229_1	chrX	-	718	9	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	3520	608	-114	-97	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTGAGTTTGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	93582229	93579687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212
ENSMUSG00000025151.17_93579802_93582283_1	chrX	-	658	9	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	3466	722	-168	-211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAAGCCTTGGATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	93582283	93579801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212
ENSMUSG00000025151.17_93580520_93582432_1	chrX	-	717	8	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	3317	1440	-317	-929	internal_fragment	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGACTAGCAAGATGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	93582432	93580519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212
ENSMUSG00000025151.17_93581281_93582557_1	chrX	-	662	5	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	3192	2201	-442	-1690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGACTGACCTTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	93582557	93581280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212
ENSMUSG00000025151.17_93581606_93582661_1	chrX	-	659	4	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	3088	2526	-546	-2015	internal_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCCTGGCTGGCATACT	NA	NA	NA	NA	NA	NA	NA	NA	93582661	93581605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93581672_93581789_93581870_93582050_93582115_93582212
ENSMUSG00000025151.17_93581638_93582733_1	chrX	-	699	4	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	3016	2558	-618	-2047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCATCTGTATATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	93582733	93581637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93581672_93581789_93581870_93582050_93582115_93582212
ENSMUSG00000025151.17_93582388_93583622_1	chrX	-	662	2	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	2127	3308	-1507	-2797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTCCCTCCGACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	93583622	93582387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93582888_93583460
ENSMUSG00000025151.17_93582674_93583885_1	chrX	-	639	2	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	1864	3594	-1770	-3083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCCCCCAGCTAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	93583885	93582673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93582888_93583460
ENSMUSG00000025151.17_93582727_93583949_1	chrX	-	650	2	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	1800	3647	1800	-3136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATCAGGCTGGCAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	93583949	93582726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93582888_93583460
ENSMUSG00000025151.17_93583485_93584891_1	chrX	-	704	2	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	858	4405	858	-3894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGGGGCAAGAGGACCCG	NA	NA	NA	NA	NA	NA	NA	NA	93584891	93583484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93584154_93584856
ENSMUSG00000025151.17_93583563_93584917_1	chrX	-	652	2	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	832	4483	832	-3972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGAAGCTGATGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	93584917	93583562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93584154_93584856
ENSMUSG00000025151.17_93583672_93585596_1	chrX	-	655	3	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	153	4592	153	-4081	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAAGACAGCTAAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	93585596	93583671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93584154_93584856_93584931_93585497
ENSMUSG00000025151.17_93583723_93585641_1	chrX	-	649	3	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	108	4643	108	-4132	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACAATTTCCCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	93585641	93583722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93584154_93584856_93584931_93585497
ENSMUSG00000025151.17_93583773_93585749_1	chrX	-	707	3	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	0	4693	0	-4182	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAATGGCCTTTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	93585749	93583772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93584154_93584856_93584931_93585497
ENSMUSG00000025153.10_120696672_120699997_1	chr11	-	2865	5	ISM	ENSMUSG00000025153.10	ENSMUST00000055655.9	10050	43	15376	0	14924	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTAAATAACTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	120699997	120696671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850
ENSMUSG00000025153.10_120697126_120700817_1	chr11	-	2869	7	ISM	ENSMUSG00000025153.10	ENSMUST00000206589.2	8333	43	14104	-805	14104	-454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGTCCATTCCTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	120700817	120697125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629
ENSMUSG00000025153.10_120706156_120711857_1	chr11	-	2866	17	ISM	ENSMUSG00000025153.10	ENSMUST00000206589.2	8333	43	3064	8225	3064	-8225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGTCAGAAGGTGTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	120711857	120706155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724
ENSMUSG00000025153.10_120706890_120714959_1	chr11	-	2874	17	ISM	ENSMUSG00000025153.10	ENSMUST00000206589.2	8333	43	-38	8959	-38	-8959	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCACTATACTACCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	120714959	120706889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ENSMUSG00000025154.16_41758433_41773337_1	chr19	-	964	8	ISM	ENSMUSG00000025154.16	ENST00000371027.5	1671	12	10116	-8	7116	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTGTGCTCCGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	41773337	41758432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210
ENSMUSG00000025154.16_41758433_41780299_1	chr19	-	1382	10	FSM	ENSMUSG00000025154.16	ENST00000358308.7	1528	10	154	-8	154	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTGTGCTCCGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	41780299	41758432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41773210_41773438_41774996_41775207_41776744_41776826_41780185
ENSMUSG00000025154.16_41758543_41773420_1	chr19	-	937	8	ISM	ENSMUSG00000025154.16	ENST00000371027.5	1671	12	10033	102	7033	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTGCAGCTGCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	41773420	41758542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210
ENSMUSG00000025155.16_120680027_120686403_1	chr11	-	1511	13	ISM	ENSMUSG00000025155.16	ENSMUST00000167023.8	1909	14	818	-1	818	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	120686403	120680026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302
ENSMUSG00000025155.16_120680027_120686458_1	chr11	-	1566	13	ISM	ENSMUSG00000025155.16	ENSMUST00000167023.8	1909	14	763	-1	763	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	120686458	120680026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302
ENSMUSG00000025155.16_120680245_120687026_1	chr11	-	1497	14	FSM	ENSMUSG00000025155.16	ENSMUST00000167023.8	1909	14	195	217	195	-213	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGCAAGAGCCATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	120687026	120680244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686968
ENSMUSG00000025155.16_120680304_120687072_1	chr11	-	1484	14	FSM	ENSMUSG00000025155.16	ENSMUST00000167023.8	1909	14	149	276	149	-272	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGGCCTGTGACACCAA	NA	NA	NA	NA	NA	NA	NA	NA	120687072	120680303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686968
ENSMUSG00000025155.16_120680353_120687203_1	chr11	-	1566	14	FSM	ENSMUSG00000025155.16	ENSMUST00000167023.8	1909	14	18	325	18	-321	multi-exon	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTGGCCTGGAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	120687203	120680352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686968
ENSMUSG00000025156.18_120675131_120679609_1	chr11	+	1505	14	FSM	ENSMUSG00000025156.18	ENSMUST00000208737.2	1843	14	20	318	0	39	multi-exon	TRUE	canonical	NA	NA	NA	NA	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTGCCTGTGGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120675130	120679609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUSG00000025156.18_120675131_120679609_2	chr11	+	1517	14	FSM	ENSMUSG00000025156.18	ENST00000624957.3	1510	14	32	-39	0	39	multi-exon	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTGCCTGTGGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120675130	120679609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677115_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUSG00000025156.18_120675341_120677409_1	chr11	+	683	5	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	0	2519	0	-2161	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTGTGGGGACCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	120675340	120677409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377
ENSMUSG00000025156.18_120675506_120677503_1	chr11	+	612	5	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	165	2425	165	-2067	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATCAAGGTGGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	120675505	120677503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377
ENSMUSG00000025156.18_120675941_120679609_1	chr11	+	1473	13	ISM	ENSMUSG00000025156.18	ENSMUST00000208737.2	1843	14	830	318	600	39	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTGCCTGTGGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120675940	120679609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUSG00000025156.18_120675941_120679609_2	chr11	+	1483	13	NNC	ENSMUSG00000025156.18	novel	1510	14	NA	NA	600	39	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTGCCTGTGGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120675940	120679609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_120676040_120676525_120676708_120677115_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679289_120679423_120679495
ENSMUSG00000025156.18_120675941_120679609_3	chr11	+	1480	13	NNC	ENSMUSG00000025156.18	novel	1510	14	NA	NA	600	39	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTGCCTGTGGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120675940	120679609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_120676040_120676525_120676708_120677115_120677293_120677377_120677514_120677602_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUSG00000025156.18_120675993_120677865_1	chr11	+	639	6	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	652	2063	652	-1705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCCTCACCAAGCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	120675992	120677865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834
ENSMUSG00000025156.18_120676525_120679609_1	chr11	+	1451	11	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	1184	319	1184	39	intron_retention	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTGCCTGTGGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120676524	120679609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
ENSMUSG00000025156.18_120676525_120679706_1	chr11	+	1465	12	NNC	ENSMUSG00000025156.18	novel	1843	14	NA	NA	1184	136	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTGCCAGTTCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	120676524	120679706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677844_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUSG00000025156.18_120676525_120679706_2	chr11	+	1467	12	NNC	ENSMUSG00000025156.18	novel	1843	14	NA	NA	1184	136	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTGCCAGTTCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	120676524	120679706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_120676708_120677127_120677293_120677377_120677514_120677602_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUSG00000025156.18_120676632_120679732_1	chr11	+	1391	12	ISM	ENSMUSG00000025156.18	ENSMUST00000208737.2	1843	14	1521	195	1291	162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCTGAGGTACCCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	120676631	120679732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUSG00000025156.18_120677125_120679928_1	chr11	+	1514	11	ISM	ENSMUSG00000025156.18	ENSMUST00000208737.2	1843	14	2014	-1	1784	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	120677124	120679928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUSG00000025156.18_120677195_120679928_1	chr11	+	1444	11	ISM	ENSMUSG00000025156.18	ENSMUST00000208737.2	1843	14	2084	-1	1854	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	120677194	120679928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUSG00000025156.18_120677375_120679928_1	chr11	+	1425	9	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	2034	0	2034	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	120677374	120679928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
ENSMUSG00000025156.18_120679104_120679928_1	chr11	+	672	3	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	3763	0	3763	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	120679103	120679928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120679208_120679287_120679423_120679495
ENSMUSG00000025157.9_41921961_41930445_1	chr19	+	1266	10	ISM	ENSMUSG00000025157.9	ENSMUST00000026154.9	1821	11	32	2098	32	-1891	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACAGACAGAGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	41921960	41930445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374
ENSMUSG00000025157.9_41921961_41932052_1	chr19	+	1298	11	FSM	ENSMUSG00000025157.9	ENSMUST00000026154.9	1821	11	32	491	32	-284	multi-exon	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACCTGCCCCATGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	41921960	41932052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ENSMUSG00000025157.9_41923174_41932105_1	chr19	+	1210	10	ISM	ENSMUSG00000025157.9	ENSMUST00000026154.9	1821	11	1245	438	1245	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACTCAGCCTCTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	41923173	41932105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ENSMUSG00000025157.9_41926042_41932267_1	chr19	+	1223	9	ISM	ENSMUSG00000025157.9	ENSMUST00000026154.9	1821	11	4113	276	2	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCTGCCACCTAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	41926041	41932267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ENSMUSG00000025157.9_41926107_41930446_1	chr19	+	717	7	ISM	ENSMUSG00000025157.9	ENST00000345745.9	1099	8	67	1890	67	-1890	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTACAGACAGAGCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	41926106	41930446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41926290_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374
ENSMUSG00000025157.9_41926107_41932336_1	chr19	+	1227	9	ISM	ENSMUSG00000025157.9	ENSMUST00000026154.9	1821	11	4178	207	67	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTTAGCTCCAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	41926106	41932336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ENSMUSG00000025157.9_41926491_41932543_1	chr19	+	1222	8	ISM	ENSMUSG00000025157.9	ENSMUST00000026154.9	1821	11	4562	0	451	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGCTTCTCTGTGCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	41926490	41932543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ENSMUSG00000025157.9_41928103_41932336_1	chr19	+	667	5	ISM	ENSMUSG00000025157.9	ENST00000345745.9	1099	8	2063	0	2063	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTTAGCTCCAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	41928102	41932336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ENSMUSG00000025158.8_120672803_120673907_2	chr11	-	418	4	ISM	ENSMUSG00000025158.8	ENSMUST00000026156.8	2118	8	1126	1229	278	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGGCACCCTGGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	120673907	120672802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120672891_120673208_120673375_120673454_120673544_120673832
ENSMUSG00000025158.8_120673264_120674151_1	chr11	-	412	4	ISM	ENSMUSG00000025158.8	ENSMUST00000026156.8	2118	8	882	1690	34	-461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTCGCACCTGGAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	120674151	120673263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120673375_120673454_120673544_120673832_120673987_120674093
ENSMUSG00000025158.8_120674133_120674833_1	chr11	-	228	3	ISM	ENSMUSG00000025158.8	ENSMUST00000026156.8	2118	8	200	2559	200	-1330	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGGTGGAATATGATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	120674833	120674132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120674197_120674560_120674610_120674718
ENSMUSG00000025161.17_120847570_120849143_1	chr11	+	842	2	ISM	ENSMUSG00000025161.17	ENSMUST00000100130.10	2386	5	7677	683	7663	-458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGCGGTGAAGCCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	120847569	120849143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120847949_120848680
ENSMUSG00000025162.19_120852575_120864797_1	chr11	-	2138	8	NNC	ENSMUSG00000025162.19	novel	2674	10	NA	NA	17121	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	120864797	120852574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_120852970_120854000_120854733_120858821_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646
ENSMUSG00000025162.19_120852575_120874111_1	chr11	-	2188	9	NNC	ENSMUSG00000025162.19	novel	2674	10	NA	NA	7807	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	957	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	120874111	120852574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_120852968_120854000_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058
ENSMUSG00000025162.19_120852575_120874111_2	chr11	-	2190	9	ISM	ENSMUSG00000025162.19	ENST00000314028.10	2674	10	8075	0	7807	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	120874111	120852574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120852970_120854000_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058
ENSMUSG00000025162.19_120852772_120881813_1	chr11	-	2102	10	NNC	ENSMUSG00000025162.19	novel	2674	10	NA	NA	105	-197	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTCCTCCAGGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	120881813	120852771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_120852970_120854002_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ENSMUSG00000025162.19_120852772_120881813_2	chr11	-	2104	10	FSM	ENSMUSG00000025162.19	ENST00000314028.10	2674	10	373	197	105	-197	multi-exon	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTCCTCCAGGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	120881813	120852771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120852970_120854000_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ENSMUSG00000025162.19_120852772_120881918_1	chr11	-	2209	10	FSM	ENSMUSG00000025162.19	ENST00000314028.10	2674	10	268	197	0	-197	multi-exon	FALSE	canonical	NA	NA	NA	NA	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTCCTCCAGGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	120881918	120852771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120852970_120854000_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ENSMUSG00000025162.19_120853273_120858898_1	chr11	-	1538	2	ISM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	23258	698	23020	-698	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCCCTGTCAGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	120858898	120853272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120854733_120858820
ENSMUSG00000025162.19_120853700_120863271_1	chr11	-	1563	5	ISM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	18885	1125	18647	-1125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTATGCCTTTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	120863271	120853699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202
ENSMUSG00000025162.19_120853782_120863320_1	chr11	-	1530	5	ISM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	18836	1207	18598	-1207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGCTGGAGAGCTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	120863320	120853781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202
ENSMUSG00000025162.19_120853849_120863373_1	chr11	-	1516	5	ISM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	18783	1274	18545	-1274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCCCAAAGGAGGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	120863373	120853848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202
ENSMUSG00000025162.19_120854001_120882156_1	chr11	-	2249	9	FSM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	0	1426	0	-1426	multi-exon	FALSE	canonical	NA	NA	NA	NA	1075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCTTGTGGCTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	120882156	120854000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ENSMUSG00000025162.19_120854120_120882156_1	chr11	-	2130	9	FSM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	0	1545	0	-1545	multi-exon	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGTGAGTGTTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	120882156	120854119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ENSMUSG00000025162.19_120854599_120882156_1	chr11	-	1651	9	FSM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	0	2024	0	-2024	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTCTAAACCTGAAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	120882156	120854598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ENSMUSG00000025169.7_121068417_121090634_1	chr11	-	791	6	ISM	ENSMUSG00000025169.7	ENSMUST00000026169.7	1308	9	4903	0	4903	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGATCTGGGCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	121090634	121068416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121068765_121074236_121074361_121085905_121086060_121087562_121087620_121088256_121088322_121090591
ENSMUSG00000025169.7_121068604_121093817_1	chr11	-	781	8	ISM	ENSMUSG00000025169.7	ENSMUST00000026169.7	1308	9	1720	187	1720	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCCTGTCAGAGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	121093817	121068603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121068765_121074236_121074361_121085905_121086060_121087562_121087620_121088256_121088322_121090591_121090635_121091736_121091813_121093716
ENSMUSG00000025169.7_121068740_121093903_1	chr11	-	731	8	ISM	ENSMUSG00000025169.7	ENSMUST00000026169.7	1308	9	1634	323	1634	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAGAACCTGCACCGAG	NA	NA	NA	NA	NA	NA	NA	NA	121093903	121068739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121068765_121074236_121074361_121085905_121086060_121087562_121087620_121088256_121088322_121090591_121090635_121091736_121091813_121093716
ENSMUSG00000025169.7_121074284_121095392_1	chr11	-	768	8	ISM	ENSMUSG00000025169.7	ENSMUST00000026169.7	1308	9	145	5867	145	-5867	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTCATGGAAGAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	121095392	121074283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121074361_121085905_121086060_121087562_121087620_121088256_121088322_121090591_121090635_121091736_121091813_121093716_121093935_121095314
ENSMUSG00000025169.7_121085939_121095537_1	chr11	-	803	7	ISM	ENSMUSG00000025169.7	ENSMUST00000026169.7	1308	9	0	17522	0	-17522	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGAGTACTGGCACGC	NA	NA	NA	NA	NA	NA	NA	NA	121095537	121085938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121086060_121087562_121087620_121088256_121088322_121090591_121090635_121091736_121091813_121093716_121093935_121095314
ENSMUSG00000025170.14_121247234_121248795_1	chr11	-	1011	2	ISM	ENSMUSG00000025170.14	ENSMUST00000106107.3	1861	6	30282	283	30225	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGATTTGATAAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	121248795	121247233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121248135_121248685
ENSMUSG00000025170.14_121247417_121249671_1	chr11	-	1012	3	ISM	ENSMUSG00000025170.14	ENSMUST00000106107.3	1861	6	29406	466	29349	-466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATGTGTGTAGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	121249671	121247416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121248135_121248685_121248909_121249600
ENSMUSG00000025170.14_121247674_121278939_1	chr11	-	1000	6	FSM	ENSMUSG00000025170.14	ENSMUST00000106107.3	1861	6	138	723	81	237	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCGAGGAACATGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	121278939	121247673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_121248135_121248685_121248909_121249600_121249679_121250385_121250447_121254329_121254391_121278823
ENSMUSG00000025170.14_121247911_121279047_1	chr11	-	720	6	FSM	ENSMUSG00000025170.14	ENST00000538809.6	693	6	-27	0	-27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCCCGCCCAGGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	121279047	121247910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_121248135_121248685_121248758_121249600_121249679_121250385_121250447_121254329_121254391_121278823
ENSMUSG00000025171.3_41970202_42022756_1	chr19	+	1203	3	FSM	ENSMUSG00000025171.3	ENSMUST00000026170.3	1529	3	0	326	0	-326	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGTTGGAAGCAATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	41970201	42022756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_41970448_42020327_42020556_42022027
ENSMUSG00000025171.3_42020379_42023082_1	chr19	+	1232	2	ISM	ENSMUSG00000025171.3	ENSMUST00000026170.3	1529	3	50177	0	50177	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTAGCACATGACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	42020378	42023082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_42020556_42022027
ENSMUSG00000025172.4_42024477_42032581_1	chr19	+	752	7	FSM	ENSMUSG00000025172.4	ENST00000455090.1	754	7	2	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTGTTCCTCGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	42024476	42032581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_42024562_42028288_42028391_42028522_42028682_42028774_42028883_42030390_42030490_42030807_42030907_42032481
ENSMUSG00000025172.4_42028575_42033549_1	chr19	+	861	7	ISM	ENSMUSG00000025172.4	ENSMUST00000026172.3	1100	9	4098	0	4098	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGGCGTTTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	42028574	42033549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_42028682_42028774_42028883_42030390_42030490_42030807_42030907_42032191_42032291_42032481_42032581_42033299
ENSMUSG00000025173.14_121218050_121219743_1	chr11	-	1366	2	ISM	ENSMUSG00000025173.14	ENSMUST00000026173.13	2321	10	25528	0	25474	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGAGCCATATGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	121219743	121218049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121219291_121219618
ENSMUSG00000025173.14_121218050_121226402_1	chr11	-	963	6	NNC	ENSMUSG00000025173.14	novel	1491	11	NA	NA	18815	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGAGCCATATGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	121226402	121218049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_121218276_121219050_121219291_121219618_121219741_121220157_121220254_121220972_121221059_121226209
ENSMUSG00000025173.14_121218050_121227898_1	chr11	-	1064	7	ISM	ENSMUSG00000025173.14	ENST00000392325.9	1491	11	17319	-1	17319	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGAGCCATATGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	121227898	121218049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121218276_121219050_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801
ENSMUSG00000025173.14_121218225_121229416_1	chr11	-	921	8	ISM	ENSMUSG00000025173.14	ENST00000392325.9	1491	11	15801	174	15801	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTCAGTTCTGCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	121229416	121218224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121218276_121219050_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382
ENSMUSG00000025173.14_121218230_121220171_1	chr11	-	1203	3	ISM	ENSMUSG00000025173.14	ENSMUST00000026173.13	2321	10	25100	180	25046	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAGGTTCTCAGTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	121220171	121218229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121219291_121219618_121219741_121220151
ENSMUSG00000025173.14_121218423_121226223_1	chr11	-	1192	5	ISM	ENSMUSG00000025173.14	ENST00000392325.9	1491	11	18994	372	18994	-372	internal_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTCATCTCTCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	121226223	121218422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209
ENSMUSG00000025173.14_121218474_121226282_1	chr11	-	1200	5	ISM	ENSMUSG00000025173.14	ENST00000392325.9	1491	11	18935	423	18935	-423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTAGCTCCCGTTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	121226282	121218473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209
ENSMUSG00000025173.14_121218550_121226362_1	chr11	-	1204	5	ISM	ENSMUSG00000025173.14	ENST00000392325.9	1491	11	18855	499	18855	-499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATAGTCTTTAAAAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	121226362	121218549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209
ENSMUSG00000025173.14_121218661_121227861_1	chr11	-	1191	6	ISM	ENSMUSG00000025173.14	ENST00000392325.9	1491	11	17356	610	17356	-610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGGCACCCATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	121227861	121218660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801
ENSMUSG00000025173.14_121219058_121245167_1	chr11	-	1209	10	FSM	ENSMUSG00000025173.14	ENSMUST00000026173.13	2321	10	104	1008	50	-1007	multi-exon	FALSE	canonical	NA	NA	NA	NA	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACGTGGTTGTCTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	121245167	121219057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
ENSMUSG00000025173.14_121219058_121245271_1	chr11	-	1313	10	FSM	ENSMUSG00000025173.14	ENSMUST00000026173.13	2321	10	0	1008	0	-1007	multi-exon	FALSE	canonical	NA	NA	NA	NA	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACGTGGTTGTCTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	121245271	121219057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
ENSMUSG00000025178.10_42078909_42108551_1	chr19	+	1630	9	FSM	ENSMUSG00000025178.10	ENSMUST00000066778.6	3604	9	-1	1975	0	-1919	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAAGCACAATGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	42078908	42108551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
ENSMUSG00000025178.10_42079106_42108696_1	chr19	+	1572	9	NNC	ENSMUSG00000025178.10	novel	3604	9	NA	NA	196	-1774	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAACCCTCTCCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	42079105	42108696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101487_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
ENSMUSG00000025178.10_42079227_42110163_1	chr19	+	1578	10	NNC	ENSMUSG00000025178.10	novel	2261	10	NA	NA	317	-307	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGGTCCAATGGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	42079226	42110163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42108784_42110129
ENSMUSG00000025178.10_42079260_42110231_1	chr19	+	1613	10	NNC	ENSMUSG00000025178.10	novel	2261	10	NA	NA	350	-239	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTCCCTCGAAGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	42079259	42110231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42108784_42110129
ENSMUSG00000025178.10_42079316_42110276_1	chr19	+	1602	10	NNC	ENSMUSG00000025178.10	novel	2261	10	NA	NA	406	-194	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGTGCCAGGAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	42079315	42110276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42108784_42110129
ENSMUSG00000025178.10_42089075_42110464_1	chr19	+	1731	9	NNC	ENSMUSG00000025178.10	novel	2261	10	NA	NA	10165	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACCTCTCTGTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	42089074	42110464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42108784_42110129
ENSMUSG00000025178.10_42089134_42109745_1	chr19	+	2299	8	ISM	ENSMUSG00000025178.10	ENSMUST00000235932.2	1939	10	10225	725	10224	-725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGAGGAGCACAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	42089133	42109745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
ENSMUSG00000025178.10_42089201_42110464_1	chr19	+	1605	9	NNC	ENSMUSG00000025178.10	novel	2261	10	NA	NA	10291	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACCTCTCTGTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	42089200	42110464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42108784_42110129
ENSMUSG00000025178.10_42093869_42110138_1	chr19	+	2317	6	ISM	ENSMUSG00000025178.10	ENSMUST00000235932.2	1939	10	14960	332	14959	-332	intron_retention	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCAGGTTTGCCATCAGG	NA	NA	NA	NA	NA	NA	NA	NA	42093868	42110138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
ENSMUSG00000025178.10_42103501_42110311_1	chr19	+	2349	4	ISM	ENSMUSG00000025178.10	ENSMUST00000235932.2	1939	10	24592	159	24591	-159	intron_retention	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACAGCCGCCCCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	42103500	42110311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_42103576_42104323_42104458_42104945_42105006_42108231
ENSMUSG00000025178.10_42104349_42110464_1	chr19	+	2402	3	ISM	ENSMUSG00000025178.10	ENSMUST00000235932.2	1939	10	25440	6	25439	-6	intron_retention	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACCTCTCTGTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	42104348	42110464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_42104458_42104945_42105006_42108231
ENSMUSG00000025184.11_42551222_42580102_1	chr19	+	3102	6	ISM	ENSMUSG00000025184.11	ENSMUST00000026188.10	4112	7	44024	680	43985	653	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCTGCAGGAAACGTCT	NA	NA	NA	NA	NA	NA	NA	NA	42551221	42580102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
ENSMUSG00000025184.11_42551796_42580676_1	chr19	+	3102	6	ISM	ENSMUSG00000025184.11	ENSMUST00000026188.10	4112	7	44598	106	44559	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGTGAATACAATGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	42551795	42580676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
ENSMUSG00000025190.14_43488191_43495465_1	chr19	-	1371	5	ISM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	17579	0	17579	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTGTGATCCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	43495465	43488190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360
ENSMUSG00000025190.14_43488330_43495465_1	chr19	-	1232	5	ISM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	17579	139	17579	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGATTTACGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	43495465	43488329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360
ENSMUSG00000025190.14_43488460_43496400_1	chr19	-	1307	7	ISM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	16644	269	16644	-269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATTAAAACTCATCATC	NA	NA	NA	NA	NA	NA	NA	NA	43496400	43488459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308
ENSMUSG00000025190.14_43488460_43496411_1	chr19	-	1318	7	ISM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	16633	269	16633	-269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATTAAAACTCATCATC	NA	NA	NA	NA	NA	NA	NA	NA	43496411	43488459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308
ENSMUSG00000025190.14_43488754_43512924_1	chr19	-	1375	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	120	563	120	-563	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGAGGGGAAGCAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	43512924	43488753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ENSMUSG00000025190.14_43488754_43512939_1	chr19	-	1390	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	105	563	105	-563	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGAGGGGAAGCAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	43512939	43488753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ENSMUSG00000025190.14_43488860_43512952_1	chr19	-	1297	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	92	669	92	-669	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAACACCTCGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	43512952	43488859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ENSMUSG00000025190.14_43488929_43513044_1	chr19	-	1320	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	0	738	0	-738	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGGCTTGACCACCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	43513044	43488928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ENSMUSG00000025190.14_43488931_43513044_1	chr19	-	1318	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	0	740	0	-740	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCGGCTTGACCACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	43513044	43488930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ENSMUSG00000025198.17_44023383_44056122_1	chr19	-	2919	10	ISM	ENSMUSG00000025198.17	ENSMUST00000170801.8	3172	11	1843	0	1843	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGTGTTCTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	44056122	44023382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038
ENSMUSG00000025199.17_44061775_44085415_1	chr19	-	2684	14	ISM	ENSMUSG00000025199.17	ENSMUST00000026217.11	3502	21	10504	1	10501	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGAATCTCTACTCATT	NA	NA	NA	NA	NA	NA	NA	NA	44085415	44061774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347
ENSMUSG00000025199.17_44062575_44095908_1	chr19	-	2690	21	FSM	ENSMUSG00000025199.17	ENSMUST00000026217.11	3502	21	11	801	8	-800	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACAGGAATGAAAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	44095908	44062574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ENSMUSG00000025200.8_44097076_44103060_1	chr19	-	2340	4	ISM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	21255	0	21255	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCACTGTAGAAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	44103060	44097075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962
ENSMUSG00000025200.8_44097076_44103129_1	chr19	-	2409	4	ISM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	21186	0	21186	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCACTGTAGAAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	44103129	44097075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962
ENSMUSG00000025200.8_44097572_44113295_1	chr19	-	2338	8	ISM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	11020	496	11020	-496	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTCCTGCCTCAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	44113295	44097571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246
ENSMUSG00000025200.8_44097855_44117744_1	chr19	-	2318	10	ISM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	6571	779	6571	-779	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCTTTTCCACCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	44117744	44097854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636
ENSMUSG00000025200.8_44097855_44117828_1	chr19	-	2402	10	ISM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	6487	779	6487	-779	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCTTTTCCACCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	44117828	44097854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636
ENSMUSG00000025200.8_44098027_44119917_1	chr19	-	2320	11	ISM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	4398	951	4398	-951	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCAATGTTTCATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44119917	44098026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850
ENSMUSG00000025200.8_44098214_44121513_1	chr19	-	2322	13	ISM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	2802	1138	2802	-1138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTACAGAGTTTAGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	44121513	44098213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438
ENSMUSG00000025203.7_44282113_44295303_1	chr19	+	5450	6	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	44282112	44295303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291444
ENSMUSG00000025203.7_44282113_44295303_2	chr19	+	5446	6	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	44282112	44295303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_44282851_44283342_44283617_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ENSMUSG00000025203.7_44282113_44295303_3	chr19	+	5445	6	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	44282112	44295303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289660_44289884_44291439
ENSMUSG00000025203.7_44282113_44295303_4	chr19	+	5448	6	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	931	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	44282112	44295303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_44282851_44283342_44283626_44286478_44286603_44288047_44288254_44289650_44289884_44291439
ENSMUSG00000025204.11_44538692_44543425_1	chr19	-	472	4	ISM	ENSMUSG00000025204.11	ENSMUST00000026222.11	680	5	454	13	426	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGCTCTGGTTTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44543425	44538691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369
ENSMUSG00000025204.11_44538692_44543432_1	chr19	-	479	4	ISM	ENSMUSG00000025204.11	ENSMUST00000026222.11	680	5	447	13	419	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGCTCTGGTTTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44543432	44538691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369
ENSMUSG00000025204.11_44538835_44543486_1	chr19	-	390	4	ISM	ENSMUSG00000025204.11	ENSMUST00000026222.11	680	5	393	156	365	41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAATAATCTGTACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	44543486	44538834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369
ENSMUSG00000025204.11_44538876_44543844_1	chr19	-	675	5	FSM	ENSMUSG00000025204.11	ENST00000370320.4	682	5	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTCTGTCTTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	44543844	44538875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_44539079_44541136_44541293_44542107_44542208_44543369_44543497_44543755
ENSMUSG00000025207.17_44980861_44990847_1	chr19	+	1848	14	NNC	ENSMUSG00000025207.17	novel	2588	14	NA	NA	-36	-633	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTCCTGAATTCAGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	44980860	44990847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987321_44987492_44987617_44987680_44990785
ENSMUSG00000025207.17_44980867_44990851_1	chr19	+	1851	14	FSM	ENSMUSG00000025207.17	ENST00000517724.5	2588	14	108	629	-30	-629	multi-exon	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAATTCAGACAAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	44980866	44990851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987492_44987617_44987680_44990785
ENSMUSG00000025207.17_44980927_44990896_1	chr19	+	1831	14	NNC	ENSMUSG00000025207.17	novel	2588	14	NA	NA	30	-584	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCATTCACATGTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	44980926	44990896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987321_44987492_44987617_44987680_44990785
ENSMUSG00000025207.17_44980934_44990907_1	chr19	+	1840	14	FSM	ENSMUSG00000025207.17	ENST00000517724.5	2588	14	175	573	37	-573	multi-exon	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGCACATGGAAGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	44980933	44990907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987492_44987617_44987680_44990785
ENSMUSG00000025207.17_44980970_44990970_1	chr19	+	1862	14	NNC	ENSMUSG00000025207.17	novel	2588	14	NA	NA	73	-510	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTCACCTATCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	44980969	44990970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987321_44987492_44987617_44987680_44990785
ENSMUSG00000025207.17_44980981_44990969_1	chr19	+	1855	14	FSM	ENSMUSG00000025207.17	ENST00000517724.5	2588	14	222	511	84	-511	multi-exon	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTCTCACCTATCCTA	NA	NA	NA	NA	NA	NA	NA	NA	44980980	44990969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987492_44987617_44987680_44990785
ENSMUSG00000025207.17_44981213_44991131_1	chr19	+	1880	13	ISM	ENSMUSG00000025207.17	ENST00000517724.5	2588	14	454	349	316	-349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTCACATGTAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	44981212	44991131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987492_44987617_44987680_44990785
ENSMUSG00000025207.17_44981279_44991167_1	chr19	+	1850	13	ISM	ENSMUSG00000025207.17	ENST00000517724.5	2588	14	520	313	382	-313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTTCCCAGATCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	44981278	44991167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987492_44987617_44987680_44990785
ENSMUSG00000025207.17_44985119_44991411_1	chr19	+	1889	10	ISM	ENSMUSG00000025207.17	ENST00000517724.5	2588	14	4360	69	4222	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTATCTCACCTGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	44985118	44991411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987492_44987617_44987680_44990785
ENSMUSG00000025207.17_44986699_44989690_1	chr19	+	632	5	ISM	ENSMUSG00000025207.17	ENST00000210633.3	3984	14	5802	2145	-3920	-1790	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTTGTGGCTACTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	44986698	44989690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44986894_44987109_44987226_44987316_44987492_44987617_44987680_44989606
ENSMUSG00000025207.17_44986767_44989748_1	chr19	+	622	5	ISM	ENSMUSG00000025207.17	ENST00000210633.3	3984	14	5870	2087	-3852	-1732	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGGAGTGGATGGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	44986766	44989748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44986894_44987109_44987226_44987316_44987492_44987617_44987680_44989606
ENSMUSG00000025207.17_44986813_44989818_1	chr19	+	646	5	ISM	ENSMUSG00000025207.17	ENST00000210633.3	3984	14	5916	2017	-3806	-1662	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGAATGGCCTCCGTAT	NA	NA	NA	NA	NA	NA	NA	NA	44986812	44989818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44986894_44987109_44987226_44987316_44987492_44987617_44987680_44989606
ENSMUSG00000025207.17_44987151_44989925_1	chr19	+	631	4	ISM	ENSMUSG00000025207.17	ENST00000210633.3	3984	14	6254	1910	-3468	-1555	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGACATGAGGATGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	44987150	44989925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44987226_44987316_44987492_44987617_44987680_44989606
ENSMUSG00000025207.17_44987207_44989985_1	chr19	+	635	4	ISM	ENSMUSG00000025207.17	ENST00000210633.3	3984	14	6310	1850	-3412	-1495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCATCTTCCCTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	44987206	44989985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44987226_44987316_44987492_44987617_44987680_44989606
ENSMUSG00000025207.17_44987432_44990119_1	chr19	+	635	3	ISM	ENSMUSG00000025207.17	ENST00000210633.3	3984	14	6535	1716	-3187	-1361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAGAGGAAGATGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	44987431	44990119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44987492_44987617_44987680_44989606
ENSMUSG00000025207.17_44990644_44991016_1	chr19	+	245	2	FSM	ENSMUSG00000025207.17	ENST00000613292.1	1087	2	25	817	25	-464	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTATCTCTTTCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	44990643	44991016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_44990658_44990785
ENSMUSG00000025208.10_44994251_44994536_1	chr19	-	164	2	ISM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	345	983	345	-983	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGAGCATCCAGGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	44994536	44994250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44994380_44994501
ENSMUSG00000025208.10_44994351_44994758_1	chr19	-	192	3	FSM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	123	1083	123	-1083	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCAAGTCGGTGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	44994758	44994350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_44994380_44994501_44994609_44994702
ENSMUSG00000025209.6_44996074_45000158_1	chr19	+	1368	5	FSM	ENSMUSG00000025209.6	ENSMUST00000026227.3	3488	5	1077	1043	1077	-38	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCTTACCTTCTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	44996073	45000158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_44996815_44997718_44997960_44998570_44998679_44998856_44998999_45000022
ENSMUSG00000025209.6_44996423_45000524_1	chr19	+	1385	5	FSM	ENSMUSG00000025209.6	ENSMUST00000026227.3	3488	5	1426	677	-1356	328	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGTTTTCTGTATAGCA	NA	NA	NA	NA	NA	NA	NA	NA	44996422	45000524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_44996815_44997718_44997960_44998570_44998679_44998856_44998999_45000022
ENSMUSG00000025209.6_44997779_45000196_1	chr19	+	629	4	NNC	ENSMUSG00000025209.6	novel	634	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGACTCAAGAAGATCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	44997778	45000196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_44997960_44998570_44998679_44998856_44999028_45000027
ENSMUSG00000025209.6_44997779_45000196_2	chr19	+	634	4	FSM	ENSMUSG00000025209.6	ENST00000476766.5	634	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGACTCAAGAAGATCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	44997778	45000196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_44997960_44998570_44998679_44998856_44999028_45000022
ENSMUSG00000025209.6_44997779_45000196_3	chr19	+	626	4	NNC	ENSMUSG00000025209.6	novel	634	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGACTCAAGAAGATCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	44997778	45000196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_44997960_44998570_44998679_44998864_44999028_45000022
ENSMUSG00000025209.6_44998879_45001201_1	chr19	+	1299	2	ISM	ENSMUSG00000025209.6	ENSMUST00000026227.3	3488	5	3882	0	1100	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGCGTTTTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	44998878	45001201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_44998999_45000022
ENSMUSG00000025212.18_45037627_45038718_1	chr19	+	303	3	ISM	ENSMUSG00000025212.18	ENSMUST00000084493.8	2318	10	1384	5807	1384	-5807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGAATTACTCTAATCG	NA	NA	NA	NA	NA	NA	NA	NA	45037626	45038718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_45037707_45038182_45038354_45038666
ENSMUSG00000025212.18_45039089_45040899_1	chr19	+	340	4	ISM	ENSMUSG00000025212.18	ENSMUST00000062213.13	2867	11	2976	3922	2846	-3626	internal_fragment	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACAACTCACCTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	45039088	45040899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_45039165_45039314_45039401_45040534_45040663_45040849
ENSMUSG00000025212.18_45039352_45042771_1	chr19	+	308	5	ISM	ENSMUSG00000025212.18	ENSMUST00000062213.13	2867	11	3239	2050	3109	-1754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTCCCTCAGAGAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	45039351	45042771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740
ENSMUSG00000025212.18_45040567_45043127_1	chr19	+	328	5	ISM	ENSMUSG00000025212.18	ENSMUST00000062213.13	2867	11	4454	1694	4324	-1398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGGCTTTGAGGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	45040566	45043127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
ENSMUSG00000025212.18_45040625_45043190_1	chr19	+	333	5	ISM	ENSMUSG00000025212.18	ENSMUST00000062213.13	2867	11	4512	1631	4382	-1335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACCTTGCAATGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	45040624	45043190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
ENSMUSG00000025213.12_45063680_45065481_1	chr19	+	722	3	ISM	ENSMUSG00000025213.12	ENSMUST00000111948.8	1625	6	0	2247	0	-2247	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACCTGAGTCGAGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	45063679	45065481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_45063958_45064633_45064676_45065079
ENSMUSG00000025213.12_45063916_45066759_1	chr19	+	682	4	ISM	ENSMUSG00000025213.12	ENSMUST00000111948.8	1625	6	236	969	236	-969	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATTTGGAATGTGACCG	NA	NA	NA	NA	NA	NA	NA	NA	45063915	45066759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_45063958_45064633_45064676_45065079_45065653_45066734
ENSMUSG00000025213.12_45064578_45087879_1	chr19	+	1422	6	NNC	ENSMUSG00000025213.12	novel	1380	5	NA	NA	0	20151	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	45064577	45087879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_45064676_45065102_45065653_45066734_45066896_45066999_45067148_45067305_45067722_45087830
ENSMUSG00000025213.12_45064578_45087879_2	chr19	+	1418	6	NNC	ENSMUSG00000025213.12	novel	1380	5	NA	NA	0	20151	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	45064577	45087879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_45064676_45065102_45065653_45066734_45066896_45066999_45067148_45067305_45067718_45087830
ENSMUSG00000025215.11_45139484_45142044_1	chr19	+	538	2	ISM	ENSMUSG00000025215.11	ENST00000467928.2	1714	3	365	2965	365	-2794	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCGCCAGAAGTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	45139483	45142044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_45139932_45141954
ENSMUSG00000025215.11_45139695_45142156_1	chr19	+	439	2	ISM	ENSMUSG00000025215.11	ENST00000467928.2	1714	3	576	2853	-213	-2682	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTCACGGGGCGGACT	NA	NA	NA	NA	NA	NA	NA	NA	45139694	45142156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_45139932_45141954
ENSMUSG00000025215.11_45139908_45144548_2	chr19	+	464	3	FSM	ENSMUSG00000025215.11	ENST00000467928.2	1714	3	789	461	0	-290	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGTGAGGACCCAAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	45139907	45144548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_45139932_45141954_45142157_45144310
ENSMUSG00000025217.16_45352190_45517926_1	chr19	+	2452	15	FSM	ENSMUSG00000025217.16	ENSMUST00000065601.13	2978	15	0	526	0	194	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	45352189	45517926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ENSMUSG00000025217.16_45352250_45517979_1	chr19	+	2445	15	FSM	ENSMUSG00000025217.16	ENSMUST00000065601.13	2978	15	60	473	0	247	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCCCTCCATTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	45352249	45517979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ENSMUSG00000025217.16_45352272_45518034_1	chr19	+	2478	15	FSM	ENSMUSG00000025217.16	ENSMUST00000065601.13	2978	15	82	418	0	302	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGCCTGAGAAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	45352271	45518034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ENSMUSG00000025217.16_45459450_45518351_1	chr19	+	2559	12	ISM	ENSMUSG00000025217.16	ENSMUST00000224478.2	2194	14	25503	-619	25503	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATTAGATGTGTAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	45459449	45518351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ENSMUSG00000025217.16_45491371_45518351_1	chr19	+	2465	11	ISM	ENSMUSG00000025217.16	ENSMUST00000224478.2	2194	14	57424	-619	57424	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATTAGATGTGTAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	45491370	45518351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ENSMUSG00000025218.7_45540714_45546471_1	chr19	-	1686	5	ISM	ENSMUSG00000025218.7	ENSMUST00000026239.7	2324	9	2499	0	2499	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGCTGTCTGTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	45546471	45540713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_45541610_45541947_45542117_45543529_45543659_45544360_45544535_45546153
ENSMUSG00000025218.7_45541044_45547194_1	chr19	-	1647	7	ISM	ENSMUSG00000025218.7	ENSMUST00000026239.7	2324	9	1776	330	1776	-330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCTCCCAGTGACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	45547194	45541043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_45541610_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063
ENSMUSG00000025218.7_45541115_45547261_1	chr19	-	1643	7	ISM	ENSMUSG00000025218.7	ENSMUST00000026239.7	2324	9	1709	401	1709	-401	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGAAGAGCCAGTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	45547261	45541114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_45541610_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063
ENSMUSG00000025218.7_45541312_45548117_1	chr19	-	1642	8	ISM	ENSMUSG00000025218.7	ENSMUST00000026239.7	2324	9	853	598	853	-598	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGGAGAAGGACGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	45548117	45541311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_45541610_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018
ENSMUSG00000025218.7_45541396_45548155_1	chr19	-	1596	8	ISM	ENSMUSG00000025218.7	ENSMUST00000026239.7	2324	9	815	682	815	-682	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCGGAGCATGCGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	45548155	45541395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_45541610_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018
ENSMUSG00000025224.17_46141019_46242489_1	chr19	+	701	6	ISM	ENSMUSG00000025224.17	ENST00000678351.1	6117	38	50	32444	39	-32444	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCAGTCTTGCTTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	46141018	46242489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425
ENSMUSG00000025224.17_46141019_46272798_1	chr19	+	5401	39	ISM	ENSMUSG00000025224.17	ENST00000674034.1	6486	41	39	2146	39	-2135	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2627	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGGAGCGCATCGACT	NA	NA	NA	NA	NA	NA	NA	NA	46141018	46272798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46244846_46244922_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253805_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269183_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688
ENSMUSG00000025224.17_46141019_46272831_1	chr19	+	5434	39	ISM	ENSMUSG00000025224.17	ENST00000674034.1	6486	41	39	2113	39	-2102	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2862	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTGACGAGCTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	46141018	46272831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46244846_46244922_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253805_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269183_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688
ENSMUSG00000025224.17_46159123_46274162_1	chr19	+	5319	39	ISM	ENSMUSG00000025224.17	ENST00000674034.1	6486	41	18143	782	18143	-771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2968	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCCCAGCAAACTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	46159122	46274162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46244846_46244922_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253805_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269183_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ENSMUSG00000025224.17_46240551_46274419_1	chr19	+	5406	37	ISM	ENSMUSG00000025224.17	ENST00000674034.1	6486	41	99571	525	99571	-514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3598	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTTCAAGACTCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	46240550	46274419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46244846_46244922_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253805_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269183_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ENSMUSG00000025224.17_46240616_46249198_1	chr19	+	700	7	ISM	ENSMUSG00000025224.17	ENST00000678351.1	6117	38	99647	25735	99636	-25735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGAAGTGTTAGAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	46240615	46249198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151
ENSMUSG00000025224.17_46242506_46249317_1	chr19	+	683	6	ISM	ENSMUSG00000025224.17	ENST00000678351.1	6117	38	101537	25616	101526	-25616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTACTCTCTGGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	46242505	46249317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151
ENSMUSG00000025224.17_46242999_46250096_1	chr19	+	688	6	ISM	ENSMUSG00000025224.17	ENST00000678351.1	6117	38	102030	24837	102019	-24837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTCTTCCGCTTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	46242998	46250096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059
ENSMUSG00000025224.17_46247542_46274714_1	chr19	+	5283	32	ISM	ENSMUSG00000025224.17	ENSMUST00000026254.14	6450	40	106594	235	106562	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCAAGCCCAGCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	46247541	46274714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269183_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ENSMUSG00000025224.17_46247620_46253652_1	chr19	+	709	5	ISM	ENSMUSG00000025224.17	ENST00000678351.1	6117	38	106651	21281	106640	-21281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCTGTCTCTTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	46247619	46253652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46253616
ENSMUSG00000025224.17_46248011_46274949_1	chr19	+	5370	31	ISM	ENSMUSG00000025224.17	ENSMUST00000026254.14	6450	40	107063	0	107031	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3084	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTCCCGCTGATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	46248010	46274949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269183_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ENSMUSG00000025224.17_46248104_46254057_1	chr19	+	730	5	ISM	ENSMUSG00000025224.17	ENST00000678351.1	6117	38	107135	20876	107124	-20876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGCCTTAGATGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	46248103	46254057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46248236_46249151_46249318_46250059_46250272_46253616_46253805_46254025
ENSMUSG00000025224.17_46248173_46254094_1	chr19	+	698	5	ISM	ENSMUSG00000025224.17	ENST00000678351.1	6117	38	107204	20839	107193	-20839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAGGATGGTTGTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	46248172	46254094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46248236_46249151_46249318_46250059_46250272_46253616_46253805_46254025
ENSMUSG00000025224.17_46250121_46255763_1	chr19	+	691	5	ISM	ENSMUSG00000025224.17	ENST00000678351.1	6117	38	109152	19170	109141	-19170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCTCGGTTAGACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	46250120	46255763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46250272_46253616_46253805_46254025_46254167_46254463_46254553_46255641
ENSMUSG00000025224.17_46250171_46255818_1	chr19	+	696	5	ISM	ENSMUSG00000025224.17	ENST00000678351.1	6117	38	109202	19115	109191	-19115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACCTGTTGGAGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	46250170	46255818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46250272_46253616_46253805_46254025_46254167_46254463_46254553_46255641
ENSMUSG00000025224.17_46255640_46258420_1	chr19	+	775	5	ISM	ENSMUSG00000025224.17	ENST00000678351.1	6117	38	114671	16513	114660	-16513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCCAGCTTTGGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	46255639	46258420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183
ENSMUSG00000025224.17_46257236_46260269_1	chr19	+	762	6	ISM	ENSMUSG00000025224.17	ENST00000678351.1	6117	38	116267	14664	116256	-14664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGCCTGCTCTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	46257235	46260269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145
ENSMUSG00000025224.17_46259133_46267693_1	chr19	+	712	7	ISM	ENSMUSG00000025224.17	ENST00000678351.1	6117	38	118164	7240	118153	-7240	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCCAGAGTCAGCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	46259132	46267693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648
ENSMUSG00000025224.17_46260173_46268427_1	chr19	+	721	6	ISM	ENSMUSG00000025224.17	ENST00000678351.1	6117	38	119204	6506	119193	-6506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTACACAGACCATGG	NA	NA	NA	NA	NA	NA	NA	NA	46260172	46268427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350
ENSMUSG00000025224.17_46268619_46271924_1	chr19	+	755	4	ISM	ENSMUSG00000025224.17	ENST00000677240.1	6405	40	127650	3012	127639	-3009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACAAGGCAGGAAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	46268618	46271924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46268863_46268976_46269171_46271473_46271625_46271758
ENSMUSG00000025224.17_46268774_46272557_1	chr19	+	781	6	ISM	ENSMUSG00000025224.17	ENST00000677240.1	6405	40	127805	2379	127794	-2376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTCTGCCTTGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	46268773	46272557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443
ENSMUSG00000025224.17_46269026_46272756_1	chr19	+	711	6	ISM	ENSMUSG00000025224.17	ENST00000677240.1	6405	40	128057	2180	128046	-2177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGATGCAAGAGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	46269025	46272756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688
ENSMUSG00000025224.17_46269139_46272852_1	chr19	+	694	6	ISM	ENSMUSG00000025224.17	ENST00000677240.1	6405	40	128170	2084	128159	-2081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACTGTCATCCAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	46269138	46272852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688
ENSMUSG00000025224.17_46273143_46274714_1	chr19	+	746	2	ISM	ENSMUSG00000025224.17	ENST00000678351.1	6117	38	132174	219	132163	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCAAGCCCAGCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	46273142	46274714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46273273_46274098
ENSMUSG00000025225.16_46295406_46296874_1	chr19	+	675	6	ISM	ENSMUSG00000025225.16	ENST00000369966.8	2665	19	199	3562	199	-3562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGATGTCTCGGACTCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	46295405	46296874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783
ENSMUSG00000025225.16_46296073_46297407_1	chr19	+	645	6	ISM	ENSMUSG00000025225.16	ENST00000369966.8	2665	19	866	3029	866	-3029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGTTCTAGACGGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	46296072	46297407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303
ENSMUSG00000025225.16_46296461_46297621_1	chr19	+	628	6	ISM	ENSMUSG00000025225.16	ENST00000369966.8	2665	19	1254	2815	1254	-2815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCGCAGCGCAGCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	46296460	46297621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593
ENSMUSG00000025225.16_46297485_46298816_1	chr19	+	670	5	ISM	ENSMUSG00000025225.16	ENST00000369966.8	2665	19	2278	1620	2278	-1620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAATGAGGACTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	46297484	46298816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646
ENSMUSG00000025225.16_46298396_46299809_1	chr19	+	684	6	ISM	ENSMUSG00000025225.16	ENST00000369966.8	2665	19	3189	627	3189	-627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGCGACTGGGGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	46298395	46299809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720
ENSMUSG00000025225.16_46298650_46300039_1	chr19	+	685	6	ISM	ENSMUSG00000025225.16	ENST00000369966.8	2665	19	3443	397	3443	-397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTATTGGAGGCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	46298649	46300039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019
ENSMUSG00000025225.16_46299446_46300466_1	chr19	+	612	4	ISM	ENSMUSG00000025225.16	ENSMUST00000111881.4	3141	22	5311	0	4239	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCAATGTGCTGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	46299445	46300466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46299518_46299720_46299894_46300019_46300132_46300211
ENSMUSG00000025226.12_46316731_46317229_1	chr19	+	351	2	ISM	ENSMUSG00000025226.12	ENSMUST00000026256.9	1348	4	108	1656	105	-1655	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTTGGCGAGGCTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	46316730	46317229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46316966_46317113
ENSMUSG00000025227.15_46354827_46355715_1	chr19	+	233	2	ISM	ENSMUSG00000025227.15	ENST00000369931.3	422	3	47	1115	47	-1115	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTCCCAGCCCCGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	46354826	46355715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_46354993_46355648
ENSMUSG00000025227.15_46354957_46356831_1	chr19	+	246	3	FSM	ENSMUSG00000025227.15	ENST00000369931.3	422	3	177	-1	177	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATCTTTCCTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	46354956	46356831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_46354993_46355648_46355732_46356704
ENSMUSG00000025228.6_46366008_46367939_1	chr19	-	1030	3	ISM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	16247	758	16238	-755	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCACCTTGCTTACACTAA	NA	NA	NA	NA	NA	NA	NA	NA	46367939	46366007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46366909_46367046_46367088_46367851
ENSMUSG00000025228.6_46366130_46368177_1	chr19	-	1039	4	ISM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	16009	880	16000	-877	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGGTCCTGCTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	46368177	46366129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020
ENSMUSG00000025228.6_46366347_46369425_1	chr19	-	1003	6	ISM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	14761	1097	14752	-1094	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTTTTGTTTCAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	46369425	46366346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46368781_46369355
ENSMUSG00000025228.6_46366384_46369493_1	chr19	-	1034	6	ISM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	14693	1134	14684	-1131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCCATGCCTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	46369493	46366383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46368781_46369355
ENSMUSG00000025228.6_46366444_46369558_1	chr19	-	1039	6	ISM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	14628	1194	14619	-1191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCACCCGAGTGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	46369558	46366443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46368781_46369355
ENSMUSG00000025228.6_46366560_46370846_1	chr19	-	1051	7	ISM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	13340	1310	13331	-1307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGAGGCCCACTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	46370846	46366559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46368781_46369355_46369573_46370732
ENSMUSG00000025228.6_46366783_46375955_1	chr19	-	1106	10	ISM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	8231	1533	8222	-1530	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGTTAACTCCACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	46375955	46366782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46368781_46369355_46369573_46370732_46370858_46372658_46372785_46373451_46373528_46375890
ENSMUSG00000025228.6_46367047_46384137_1	chr19	-	1049	10	ISM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	49	1797	40	-1794	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTAGCCCATGTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	46384137	46367046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46367088_46367851_46367914_46368020_46368196_46368687_46368781_46369355_46369573_46370732_46370858_46372658_46372785_46373451_46373528_46375890_46375956_46384068
ENSMUSG00000025232.9_59446823_59469251_1	chr9	+	1196	9	ISM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	0	3141	0	-3141	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAAGAAAAAGGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	59446822	59469251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225
ENSMUSG00000025232.9_59446960_59469613_1	chr9	+	1152	10	ISM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	137	2779	137	-2779	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTGGCAGGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	59446959	59469613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578
ENSMUSG00000025232.9_59447119_59470200_1	chr9	+	1082	11	ISM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	296	2192	296	-2192	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGTTGGAGATGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	59447118	59470200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149
ENSMUSG00000025232.9_59447166_59470255_1	chr9	+	1090	11	ISM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	343	2137	343	-2137	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCTGGTACCTGAACCGT	NA	NA	NA	NA	NA	NA	NA	NA	59447165	59470255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149
ENSMUSG00000025232.9_59447215_59470307_1	chr9	+	1093	11	ISM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	392	2085	392	-2085	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTGGAGCCCCTGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	59447214	59470307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149
ENSMUSG00000025232.9_59461408_59470597_1	chr9	+	1173	11	ISM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	14585	1795	14585	-1795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGATTTTGGGGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	59461407	59470597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506
ENSMUSG00000025232.9_59462622_59471270_1	chr9	+	1177	11	ISM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	15799	1122	15799	-1122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCGGGCTCTGGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	59462621	59471270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165
ENSMUSG00000025232.9_59464566_59472123_1	chr9	+	1089	10	ISM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	17743	269	17743	-269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCAGTGTAGGCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	59464565	59472123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ENSMUSG00000025232.9_59464608_59472182_1	chr9	+	1106	10	ISM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	17785	210	17785	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGGAGGTTGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	59464607	59472182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ENSMUSG00000025232.9_59464663_59472235_1	chr9	+	1104	10	ISM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	17840	157	17840	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGCCTTAAGAGAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	59464662	59472235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ENSMUSG00000025232.9_59466662_59472392_1	chr9	+	1085	8	ISM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	19839	0	19839	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGGGTTGCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	59466661	59472392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ENSMUSG00000025235.9_59229388_59230732_1	chr9	-	940	2	ISM	ENSMUSG00000025235.9	ENSMUST00000026265.8	2518	16	30059	115	30059	-115	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCAAGACAATCAATGATG	NA	NA	NA	NA	NA	NA	NA	NA	59230732	59229387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_59230266_59230670
ENSMUSG00000025235.9_59229446_59230793_1	chr9	-	943	2	ISM	ENSMUSG00000025235.9	ENSMUST00000026265.8	2518	16	29998	173	29998	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGGTTTAATCCCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	59230793	59229445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_59230266_59230670
ENSMUSG00000025235.9_59229626_59231420_1	chr9	-	943	3	ISM	ENSMUSG00000025235.9	ENSMUST00000026265.8	2518	16	29371	353	29371	-353	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAACAAGTCCTTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	59231420	59229625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_59230266_59230670_59230873_59231319
ENSMUSG00000025235.9_59230020_59234878_1	chr9	-	972	6	ISM	ENSMUSG00000025235.9	ENSMUST00000026265.8	2518	16	25913	747	25913	-747	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCCAGGGTGTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	59234878	59230019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_59230266_59230670_59230873_59231319_59231462_59232072_59232143_59234469_59234642_59234738
ENSMUSG00000025236.12_59199011_59222525_1	chr9	+	1357	7	FSM	ENSMUSG00000025236.12	ENSMUST00000217570.2	2484	7	170	957	156	-954	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAAGGCCTCTTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	59199010	59222525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222013
ENSMUSG00000025236.12_59204861_59222713_1	chr9	+	1354	6	ISM	ENSMUSG00000025236.12	ENSMUST00000217570.2	2484	7	6020	769	6006	-766	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCAGCCTGTTGGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	59204860	59222713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222013
ENSMUSG00000025236.12_59204921_59222800_1	chr9	+	1381	6	ISM	ENSMUSG00000025236.12	ENSMUST00000217570.2	2484	7	6080	682	6066	-679	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTGCTACAAAGGTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	59204920	59222800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222013
ENSMUSG00000025236.12_59217576_59223015_1	chr9	+	1354	4	ISM	ENSMUSG00000025236.12	ENSMUST00000217570.2	2484	7	18735	467	18721	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCTGCTCTCAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	59217575	59223015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59217632_59220322_59220520_59221035_59221135_59222013
ENSMUSG00000025236.12_59220438_59223191_1	chr9	+	1359	3	ISM	ENSMUSG00000025236.12	ENSMUST00000217570.2	2484	7	21597	291	21583	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCCACAGCTTGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	59220437	59223191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59220520_59221035_59221135_59222013
ENSMUSG00000025239.4_123309540_123348606_1	chr9	+	1068	8	FSM	ENSMUSG00000025239.4	ENSMUST00000026269.4	4848	8	1769	2011	1769	-2011	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGACACATCCTAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	123309539	123348606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_123309687_123329195_123329298_123339572_123339641_123340280_123340344_123345839_123345971_123346427_123346480_123347160_123347230_123348170
ENSMUSG00000025239.4_123329195_123348842_1	chr9	+	1158	7	ISM	ENSMUSG00000025239.4	ENSMUST00000026269.4	4848	8	21424	1775	21424	-1775	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATATGCTTTGTACATT	NA	NA	NA	NA	NA	NA	NA	NA	123329194	123348842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_123329298_123339572_123339641_123340280_123340344_123345839_123345971_123346427_123346480_123347160_123347230_123348170
ENSMUSG00000025239.4_123345899_123349061_1	chr9	+	1084	4	ISM	ENSMUSG00000025239.4	ENSMUST00000026269.4	4848	8	38128	1556	38128	-1556	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTCTGTGACATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	123345898	123349061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_123345971_123346427_123346480_123347160_123347230_123348170
ENSMUSG00000025240.11_123358903_123415691_1	chr9	+	1593	18	ISM	ENSMUSG00000025240.11	ENSMUST00000238984.2	3433	20	-44	5972	-44	-5972	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCCAAGGGACTGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	123358902	123415691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626
ENSMUSG00000025240.11_123381759_123420201_1	chr9	+	1604	16	ISM	ENSMUSG00000025240.11	ENSMUST00000238984.2	3433	20	22812	1462	22812	-1462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTATGATTTGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	123381758	123420201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ENSMUSG00000025240.11_123381812_123420201_1	chr9	+	1551	16	ISM	ENSMUSG00000025240.11	ENSMUST00000238984.2	3433	20	22865	1462	22865	-1462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTATGATTTGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	123381811	123420201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ENSMUSG00000025240.11_123395456_123420431_1	chr9	+	1616	13	ISM	ENSMUSG00000025240.11	ENSMUST00000238984.2	3433	20	36509	1232	36509	-1232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTTAAGAGTTTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	123395455	123420431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ENSMUSG00000025240.11_123411329_123420922_1	chr9	+	1568	7	ISM	ENSMUSG00000025240.11	ENSMUST00000238984.2	3433	20	52382	741	52382	-741	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTATGTTGGCTGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	123411328	123420922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ENSMUSG00000025240.11_123411401_123420971_1	chr9	+	1545	7	ISM	ENSMUSG00000025240.11	ENSMUST00000238984.2	3433	20	52454	692	52454	-692	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATAGTTCTCCAAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	123411400	123420971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ENSMUSG00000025245.15_123528843_123537029_1	chr9	-	663	4	ISM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	9661	2766	9661	-2766	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTAGTGAGTGAACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	123537029	123528842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973
ENSMUSG00000025246.14_76554619_76704403_1	chrX	+	3241	16	FSM	ENSMUSG00000025246.14	ENST00000645353.2	3332	16	91	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAATTACCCCTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	76554618	76704403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_76554876_76588808_76589000_76684902_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ENSMUSG00000025260.11_150784841_150787438_1	chrX	+	956	6	NNC	ENSMUSG00000025260.11	novel	962	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGCAGTCTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	150784840	150787438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_150784925_150785273_150785439_150786356_150786522_150786648_150786778_150786857_150786967_150787134
ENSMUSG00000025261.19_150637158_150645741_1	chrX	+	1091	10	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	18914	72337	18914	-72337	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTTGAACGTCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	150637157	150645741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647
ENSMUSG00000025261.19_150647704_150661794_1	chrX	+	857	7	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	29460	56619	29460	-56284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGGCACCCATGGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	150647703	150661794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713
ENSMUSG00000025261.19_150654535_150664146_1	chrX	+	1048	7	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	36291	53932	36291	-53932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGCTGCAGAAATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	150654534	150664146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073
ENSMUSG00000025261.19_150657616_150664133_1	chrX	+	857	6	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	39372	54280	39372	-53945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCTTACCACCTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	150657615	150664133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073
ENSMUSG00000025261.19_150657631_150665667_1	chrX	+	1058	7	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	39387	52411	39387	-52411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTCCAGAGCTTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	150657630	150665667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487
ENSMUSG00000025261.19_150659313_150666183_1	chrX	+	1059	7	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	41069	51895	41069	-51895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTGTGATTCGAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	150659312	150666183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074
ENSMUSG00000025261.19_150659330_150665616_1	chrX	+	851	6	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	41086	52797	41086	-52462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCACCACGGTGCTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	150659329	150665616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487
ENSMUSG00000025261.19_150661814_150669108_1	chrX	+	1054	7	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	43570	48970	43570	-48970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAGCAATTGCTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	150661813	150669108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078
ENSMUSG00000025261.19_150663543_150669842_1	chrX	+	1084	7	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	45299	48236	45299	-48236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGATGAGCTCCACACT	NA	NA	NA	NA	NA	NA	NA	NA	150663542	150669842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739
ENSMUSG00000025261.19_150666174_150673787_1	chrX	+	1046	8	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	47930	44291	47930	-44291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGTGCTAGCAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	150666173	150673787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725
ENSMUSG00000025261.19_150668633_150674147_1	chrX	+	1109	8	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	50389	43931	50389	-43931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACATAAAGAAAATAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	150668632	150674147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012
ENSMUSG00000025261.19_150669928_150674814_1	chrX	+	861	7	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	51684	43264	51684	-43264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGGCCTGACAGAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	150669927	150674814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735
ENSMUSG00000025261.19_150676876_150684617_1	chrX	+	1073	7	ISM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	90553	33796	58632	-33461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAAGAAGGGACTAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	150676875	150684617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494
ENSMUSG00000025261.19_150677981_150686950_1	chrX	+	1056	7	ISM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	91658	31463	59737	-31128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCAAGGAGCTTCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	150677980	150686950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824
ENSMUSG00000025261.19_150679608_150687466_1	chrX	+	1067	7	ISM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	93285	30947	61364	-30612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGAGGTGCTCAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	150679607	150687466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349
ENSMUSG00000025261.19_150684535_150691833_1	chrX	+	1053	8	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	66291	26245	66291	-26245	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGGGCATCGGTCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	150684534	150691833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723
ENSMUSG00000025261.19_150684569_150691901_1	chrX	+	1087	8	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	66325	26177	66325	-26177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCACTACCCTGGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	150684568	150691901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723
ENSMUSG00000025261.19_150687390_150692924_1	chrX	+	1064	8	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	69146	25154	69146	-25154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCATGACTGTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	150687389	150692924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855
ENSMUSG00000025261.19_150691841_150698843_1	chrX	+	1126	7	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	73597	19235	73597	-19235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTACTATATAGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	150691840	150698843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587
ENSMUSG00000025261.19_150692893_150699097_1	chrX	+	859	6	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	74649	18981	74649	-18981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTCTCGTGGAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	150692892	150699097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036
ENSMUSG00000025261.19_150693169_150699889_1	chrX	+	872	6	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	74925	18189	74925	-18189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTACAGAACCAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	150693168	150699889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821
ENSMUSG00000025261.19_150697180_150700312_1	chrX	+	1050	5	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	78936	17766	78936	-17766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAGAAGCCCGACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	150697179	150700312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114
ENSMUSG00000025261.19_150698681_150701536_1	chrX	+	1061	6	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	80437	16542	80437	-16542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACCCGCCACTGGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	150698680	150701536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376
ENSMUSG00000025261.19_150699060_150701717_1	chrX	+	1056	5	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	80816	16361	80816	-16361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAGTTCCAATCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	150699059	150701717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376
ENSMUSG00000025261.19_150700235_150702821_1	chrX	+	1069	4	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	81991	15257	81991	-15257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCACTGGGGCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	150700234	150702821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150700404_150700546_150700650_150701376_150701924_150702571
ENSMUSG00000025261.19_150701409_150703131_1	chrX	+	1075	2	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	83165	14947	83165	-14947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTACCACAGTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	150701408	150703131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150701924_150702571
ENSMUSG00000025261.19_150701548_150704110_1	chrX	+	1055	3	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	83304	13968	83304	-13968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTCTGGCCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	150701547	150704110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150701924_150702571_150703182_150704041
ENSMUSG00000025261.19_150701673_150704330_1	chrX	+	1050	4	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	83429	13748	83429	-13748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTCTGGTACCCGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	150701672	150704330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150701924_150702571_150703182_150704041_150704158_150704257
ENSMUSG00000025261.19_150701836_150705404_1	chrX	+	1048	5	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	83592	12674	83592	-12674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTACCTGAGGAGCAACC	NA	NA	NA	NA	NA	NA	NA	NA	150701835	150705404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327
ENSMUSG00000025261.19_150702613_150705769_1	chrX	+	1053	5	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	84369	12309	84369	-12309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCCATGTTGACATCCA	NA	NA	NA	NA	NA	NA	NA	NA	150702612	150705769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691
ENSMUSG00000025261.19_150702664_150705842_1	chrX	+	1075	5	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	84420	12236	84420	-12236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGATGACACACGACGAGC	NA	NA	NA	NA	NA	NA	NA	NA	150702663	150705842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691
ENSMUSG00000025261.19_150702922_150707732_1	chrX	+	1072	7	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	84678	10346	84678	-10346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTCAAGATACTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	150702921	150707732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657
ENSMUSG00000025261.19_150703034_150710743_1	chrX	+	1102	8	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	84790	7335	84790	-7335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGAACTGGAGGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	150703033	150710743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626
ENSMUSG00000025261.19_150713178_150717562_1	chrX	+	1052	6	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	94934	516	94934	-516	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCCCTTTCCTCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	150713177	150717562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ENSMUSG00000025261.19_150713238_150717628_1	chrX	+	1058	6	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	94994	450	94994	-450	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTAGCCTTTACAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	150713237	150717628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ENSMUSG00000025261.19_150715569_150717976_1	chrX	+	1049	3	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	97325	102	97325	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCTTCCTGATCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	150715568	150717976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150715727_150715935_150716127_150717276
ENSMUSG00000025266.12_149769102_149787281_1	chrX	-	1734	14	ISM	ENSMUSG00000025266.12	ENST00000360845.3	1934	16	12933	0	-641	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3580	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGCTGACCTTCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	149787281	149769101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787219
ENSMUSG00000025266.12_149770868_149774259_1	chrX	-	318	2	ISM	ENSMUSG00000025266.12	ENST00000674420.1	1477	11	12381	33	12381	-33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAGAATAAGAAAAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	149774259	149770867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_149771058_149774131
ENSMUSG00000025266.12_149770970_149777115_1	chrX	-	462	4	ISM	ENSMUSG00000025266.12	ENST00000674420.1	1477	11	9525	135	9525	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCGTGTAGTAGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	149777115	149770969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_149771058_149774131_149774260_149776644_149776782_149777006
ENSMUSG00000025266.12_149770976_149800148_1	chrX	-	1646	15	ISM	ENSMUSG00000025266.12	ENST00000360845.3	1934	16	66	1874	66	-141	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3063	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAATAACCGTGTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	149800148	149770975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787219_149787282_149797016_149797086_149800083
ENSMUSG00000025266.12_149770986_149776733_1	chrX	-	289	3	ISM	ENSMUSG00000025266.12	ENST00000674420.1	1477	11	9907	151	9907	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCATTGCCCCCAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	149776733	149770985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_149771058_149774131_149774260_149776644
ENSMUSG00000025266.12_149771021_149800204_1	chrX	-	1657	15	ISM	ENSMUSG00000025266.12	ENST00000360845.3	1934	16	10	1919	10	-186	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2862	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATCAGATGGGGTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	149800204	149771020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787219_149787282_149797016_149797086_149800083
ENSMUSG00000025266.12_149774154_149800206_1	chrX	-	1596	14	ISM	ENSMUSG00000025266.12	ENST00000674311.1	1849	15	8	3319	8	-3319	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGAAGCACCGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	149800206	149774153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787219_149787282_149797016_149797082_149800083
ENSMUSG00000025266.12_149774169_149777102_1	chrX	-	324	3	ISM	ENSMUSG00000025266.12	ENST00000674420.1	1477	11	9538	3334	9538	-3334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGATGCTATTGAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	149777102	149774168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_149774260_149776644_149776782_149777006
ENSMUSG00000025266.12_149776690_149777337_1	chrX	-	329	3	ISM	ENSMUSG00000025266.12	ENST00000674420.1	1477	11	9303	5855	9303	-5855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATATAGAAGATACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	149777337	149776689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_149776782_149777006_149777150_149777243
ENSMUSG00000025266.12_149777082_149778060_1	chrX	-	297	3	ISM	ENSMUSG00000025266.12	ENST00000674420.1	1477	11	8580	6247	8580	-6247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGGGAAAGAAGAAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	149778060	149777081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_149777150_149777243_149777419_149778006
ENSMUSG00000025266.12_149777310_149780277_1	chrX	-	293	3	ISM	ENSMUSG00000025266.12	ENST00000674420.1	1477	11	6363	6475	6363	-6475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGAAGCTGGCAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	149780277	149777309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_149777419_149778006_149778095_149780181
ENSMUSG00000025266.12_149780270_149783734_1	chrX	-	300	3	ISM	ENSMUSG00000025266.12	ENST00000674420.1	1477	11	2906	9435	2906	-9435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTGGAGCCGAAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	149783734	149780269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_149780327_149782692_149782800_149783598
ENSMUSG00000025266.12_149780270_149786601_1	chrX	-	456	5	ISM	ENSMUSG00000025266.12	ENST00000674420.1	1477	11	39	9435	39	-9435	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTGGAGCCGAAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	149786601	149780269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149786529
ENSMUSG00000025266.12_149782771_149785239_1	chrX	-	319	4	ISM	ENSMUSG00000025266.12	ENST00000674311.1	1849	15	14975	11936	1401	-11936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGGAATACCTTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	149785239	149782770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_149782800_149783598_149783735_149784033_149784118_149785169
ENSMUSG00000025266.12_149783681_149786585_1	chrX	-	311	4	ISM	ENSMUSG00000025266.12	ENST00000674311.1	1849	15	13629	12846	55	-12846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCCGCTGTTTCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	149786585	149783680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_149783735_149784033_149784118_149785169_149785287_149786529
ENSMUSG00000025266.12_149785205_149797085_1	chrX	-	321	4	ISM	ENSMUSG00000025266.12	ENST00000674311.1	1849	15	3129	14370	3129	-14370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCCTGAAACGTCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	149797085	149785204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_149785287_149786529_149786638_149787219_149787282_149797016
ENSMUSG00000025268.16_149589420_149596703_1	chrX	-	2097	13	NNC	ENSMUSG00000025268.16	novel	2107	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTATTGCCATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	149596703	149589419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592316_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149596611
ENSMUSG00000025268.16_149589420_149596703_2	chrX	-	2099	13	NNC	ENSMUSG00000025268.16	novel	2107	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTATTGCCATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	149596703	149589419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_149589552_149589705_149590178_149590572_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149596611
ENSMUSG00000025268.16_149592698_149597265_1	chrX	-	1149	7	ISM	ENSMUSG00000025268.16	ENSMUST00000026302.13	2207	12	0	3278	0	-2985	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCGGGAAAGTGCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	149597265	149592697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149597224
ENSMUSG00000025271.14_149391582_149426611_1	chrX	+	701	8	ISM	ENSMUSG00000025271.14	ENST00000374992.6	1099	9	13979	230	13979	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGAGCCCTTTTCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	149391581	149426611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_149391725_149395908_149395976_149396872_149396948_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ENSMUSG00000025271.14_149396930_149426853_1	chrX	+	676	6	ISM	ENSMUSG00000025271.14	ENST00000374992.6	1099	9	19327	-12	19327	12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTAGGACAGGAAAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	149396929	149426853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_149396948_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ENSMUSG00000025277.15_14413285_14420199_1	chr14	-	1174	3	ISM	ENSMUSG00000025277.15	ENSMUST00000225234.2	1958	8	46655	177	46655	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGAAGGTGCTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	14420199	14413284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14414303_14419864_14419966_14420144
ENSMUSG00000025277.15_14413568_14426987_1	chr14	-	1090	5	ISM	ENSMUSG00000025277.15	ENSMUST00000225234.2	1958	8	39867	460	39867	-460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTCTGCCTCGAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	14426987	14413567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946
ENSMUSG00000025277.15_14413599_14427059_1	chr14	-	1131	5	ISM	ENSMUSG00000025277.15	ENSMUST00000225234.2	1958	8	39795	491	39795	-491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCAGGGAAGAGACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	14427059	14413598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946
ENSMUSG00000025277.15_14413822_14429949_1	chr14	-	1123	7	ISM	ENSMUSG00000025277.15	ENSMUST00000225234.2	1958	8	36905	714	36905	-714	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGCCACCCTGGACCAC	NA	NA	NA	NA	NA	NA	NA	NA	14429949	14413821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868
ENSMUSG00000025277.15_14413954_14441398_1	chr14	-	1082	8	ISM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	25473	944	25456	-846	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCCAGGATCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	14441398	14413953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383
ENSMUSG00000025277.15_14414013_14441474_1	chr14	-	1099	8	ISM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	25397	1003	25380	-905	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCCAGTTGCCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	14441474	14414012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383
ENSMUSG00000025277.15_14414120_14466854_1	chr14	-	1099	9	FSM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	17	1110	0	-1012	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTTGCATTGTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	14466854	14414119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
ENSMUSG00000025278.10_14527612_14535949_1	chr14	-	661	5	ISM	ENSMUSG00000025278.10	ENST00000493452.5	7197	43	64044	8332	64044	-8332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGGCAATCCTGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	14535949	14527611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792
ENSMUSG00000025278.10_14530639_14538725_1	chr14	-	708	5	ISM	ENSMUSG00000025278.10	ENST00000493452.5	7197	43	61268	11359	61268	-11359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGGAGCCGTGGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	14538725	14530638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626
ENSMUSG00000025278.10_14535887_14540702_1	chr14	-	742	5	ISM	ENSMUSG00000025278.10	ENST00000493452.5	7197	43	59291	16607	59291	-16607	internal_fragment	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGTTCACCGTGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	14540702	14535886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613
ENSMUSG00000025278.10_14535964_14540772_1	chr14	-	735	5	ISM	ENSMUSG00000025278.10	ENST00000493452.5	7197	43	59221	16684	59221	-16684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATTTGTGCCCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	14540772	14535963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613
ENSMUSG00000025278.10_14564141_14577627_1	chr14	-	1568	10	ISM	ENSMUSG00000025278.10	ENST00000493452.5	7197	43	22366	44861	22366	-44861	internal_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGCCGTTTGACCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	14577627	14564140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499
ENSMUSG00000025278.10_14575149_14577659_1	chr14	-	640	5	ISM	ENSMUSG00000025278.10	ENST00000493452.5	7197	43	22334	55869	22334	-55869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTCAAATACGTACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	14577659	14575148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499
ENSMUSG00000025278.10_14575589_14596391_1	chr14	-	1574	12	ISM	ENSMUSG00000025278.10	ENST00000493452.5	7197	43	3602	56309	3602	-56309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGGAGAGGAGTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	14596391	14575588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280
ENSMUSG00000025278.10_14585902_14651707_1	chr14	-	1182	7	ISM	ENSMUSG00000025278.10	ENST00000490882.5	7944	47	-42	66622	-42	-66622	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAGGGAACATTGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	14651707	14585901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ENSMUSG00000025283.16_153996128_153997130_1	chrX	-	679	3	ISM	ENSMUSG00000025283.16	ENST00000379254.5	815	5	2166	-114	2166	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGCATTTTTACTAGT	NA	NA	NA	NA	NA	NA	NA	NA	153997130	153996127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_153996664_153996892_153996934_153997028
ENSMUSG00000025283.16_153996302_153999223_1	chrX	-	682	5	FSM	ENSMUSG00000025283.16	ENST00000379254.5	815	5	73	60	73	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTTGAACATCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	153999223	153996301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998780_153998833_153999098
ENSMUSG00000025283.16_153996311_153998824_1	chrX	-	624	5	ISM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	621	183	472	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAGGCAGAATTCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	153998824	153996310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780
ENSMUSG00000025283.16_153996454_153999170_1	chrX	-	561	6	FSM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	275	326	126	-143	multi-exon	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATAATTCTCAGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	153999170	153996453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
ENSMUSG00000025283.16_153996505_153999323_1	chrX	-	663	6	FSM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	122	377	18	-194	multi-exon	FALSE	canonical	NA	NA	NA	NA	1770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGAGTGAGGCGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	153999323	153996504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
ENSMUSG00000025283.16_153996543_153999323_1	chrX	-	625	6	FSM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	122	415	18	-232	multi-exon	FALSE	canonical	NA	NA	NA	NA	1361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCAAGATTGACAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	153999323	153996542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
ENSMUSG00000025283.16_153996891_153999445_1	chrX	-	628	5	ISM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	0	763	0	-580	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCACTAGCATTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	153999445	153996890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
ENSMUSG00000025287.16_154045501_154056028_1	chrX	+	372	4	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	62	24622	62	-20973	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCCTACCACCGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	154045500	154056028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967
ENSMUSG00000025287.16_154045624_154056138_1	chrX	+	359	4	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	185	24512	185	-20863	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGTATTATATTCATT	NA	NA	NA	NA	NA	NA	NA	NA	154045623	154056138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967
ENSMUSG00000025287.16_154056045_154069338_1	chrX	+	374	5	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	10606	11312	79	-7663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCGAGATTCTGAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	154056044	154069338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284
ENSMUSG00000025287.16_154056119_154076925_1	chrX	+	267	5	FSM	ENSMUSG00000025287.16	ENST00000492081.1	496	5	153	76	153	-76	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTCCGGAAAATAAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	154056118	154076925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154076904
ENSMUSG00000025287.16_154064605_154077007_1	chrX	+	293	3	ISM	ENSMUSG00000025287.16	ENST00000492081.1	496	5	8639	-6	8639	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATACTAATTTTACTATAG	NA	NA	NA	NA	NA	NA	NA	NA	154064604	154077007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_154064691_154065046_154065151_154076904
ENSMUSG00000025287.16_154078233_154079613_1	chrX	+	340	5	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	32794	1037	22267	-1037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATAGTGAAGTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	154078232	154079613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576
ENSMUSG00000025287.16_154078726_154080410_1	chrX	+	347	4	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	33287	240	22760	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCCTGTGGAGCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	154078725	154080410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_154078765_154079320_154079409_154079576_154079728_154080341
ENSMUSG00000025287.16_154079648_154080642_1	chrX	+	381	2	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	34209	8	23682	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACGATTGTGAGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	154079647	154080642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_154079728_154080341
ENSMUSG00000025289.16_154106914_154121463_2	chrX	-	982	7	NNC	ENSMUSG00000025289.16	novel	990	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTTGCCATTGTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	154121463	154106913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_154107025_154109590_154109626_154111441_154111573_154113298_154113422_154115351_154115469_154117833_154117944_154121108
ENSMUSG00000025290.18_24540797_24547027_1	chr14	+	1596	5	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5069	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCTTGGGACTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	24540796	24547027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545848
ENSMUSG00000025290.18_24541974_24545517_1	chr14	+	342	3	ISM	ENSMUSG00000025290.18	ENSMUST00000112384.10	468	5	1225	-17	1139	17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAGTTCAAGCTATTCCG	NA	NA	NA	NA	NA	NA	NA	NA	24541973	24545517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_24542185_24543450_24543562_24545497
ENSMUSG00000025290.18_24541974_24545918_2	chr14	+	424	3	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	1139	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACACGTCTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	24541973	24545918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_24542185_24543450_24543588_24545842
ENSMUSG00000025290.18_24541974_24545918_3	chr14	+	411	3	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	1139	5	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACACGTCTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	24541973	24545918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_24542185_24543450_24543567_24545834
ENSMUSG00000025290.18_24542097_24545918_1	chr14	+	289	3	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	1262	5	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACACGTCTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	24542096	24545918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_24542185_24543450_24543567_24545833
ENSMUSG00000025323.11_118200036_118200700_1	chr12	-	555	2	ISM	ENSMUSG00000025323.11	ENST00000649633.1	5179	7	64317	1050	64317	-1050	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGATCTGGCTTTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	118200700	118200035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_118200475_118200584
ENSMUSG00000025323.11_118200242_118200932_1	chr12	-	581	2	ISM	ENSMUSG00000025323.11	ENST00000649633.1	5179	7	64085	1256	64085	-1256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGTAGCGTTATATAAA	NA	NA	NA	NA	NA	NA	NA	NA	118200932	118200241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_118200475_118200584
ENSMUSG00000025323.11_118200388_118201088_1	chr12	-	591	2	ISM	ENSMUSG00000025323.11	ENST00000649633.1	5179	7	63929	1402	63929	1301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTTTCTTGTGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	118201088	118200387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_118200475_118200584
ENSMUSG00000025323.11_118201802_118225506_1	chr12	-	573	3	ISM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	39597	113	39511	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTACAGAGTAGGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	118225506	118201801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_118202130_118218144_118218345_118225461
ENSMUSG00000025323.11_118201848_118225564_1	chr12	-	585	3	ISM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	39539	159	39453	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGTTTACACACCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	118225564	118201847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_118202130_118218144_118218345_118225461
ENSMUSG00000025323.11_118202042_118262449_1	chr12	-	594	4	ISM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	2654	353	2568	-353	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGAGGTGGGACAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	118262449	118202041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_118202130_118218144_118218345_118225461_118225691_118262372
ENSMUSG00000025323.11_118218230_118262606_1	chr12	-	578	3	ISM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	2497	16541	2411	-16541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCGTTCATATGCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	118262606	118218229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_118218345_118225461_118225691_118262372
ENSMUSG00000025323.11_118218294_118262674_1	chr12	-	582	3	ISM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	2429	16605	2343	-16605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGGGAAAGTATATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	118262674	118218293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_118218345_118225461_118225691_118262372
ENSMUSG00000025323.11_118225527_118262787_1	chr12	-	579	2	ISM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	2316	23838	2230	-23838	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGGCAAGAGGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	118262787	118225526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_118225691_118262372
ENSMUSG00000025323.11_118263350_118264462_1	chr12	-	607	2	ISM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	641	61661	555	-61661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGCGTTTCAATACCAT	NA	NA	NA	NA	NA	NA	NA	NA	118264462	118263349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_118263928_118264433
ENSMUSG00000025323.11_118263590_118265108_1	chr12	-	595	3	ISM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	-5	61901	-3	-61901	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGTACAAAACCCAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	118265108	118263589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_118263928_118264433_118264544_118264961
ENSMUSG00000025326.13_58878570_58935912_1	chr7	+	2288	6	ISM	ENSMUSG00000025326.13	ENSMUST00000202945.4	3889	9	72	3655	20	-3655	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTGTATACTGGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	58878569	58935912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801
ENSMUSG00000025326.13_58921808_58938236_1	chr7	+	2023	6	ISM	ENSMUSG00000025326.13	ENSMUST00000202945.4	3889	9	43310	1331	43258	-1331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACTAATGAATCGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	58921807	58938236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153
ENSMUSG00000025326.13_58925564_58954707_1	chr7	+	2239	8	ISM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	47065	1768	47014	-1768	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGTTAAAAAATAAATATAA	NA	NA	NA	NA	NA	NA	NA	NA	58925563	58954707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ENSMUSG00000025326.13_58925746_58938796_1	chr7	+	2031	6	ISM	ENSMUSG00000025326.13	ENSMUST00000202945.4	3889	9	47248	771	47196	-771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTAGTGATTCTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	58925745	58938796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454
ENSMUSG00000025326.13_58935926_58956172_1	chr7	+	2236	6	ISM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	57427	303	57376	-303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATTTACTGTAATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	58935925	58956172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ENSMUSG00000025326.13_58938202_58956477_1	chr7	+	2246	4	ISM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	59703	-2	59652	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTGTGTTCTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	58938201	58956477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_58938310_58938454_58938529_58953415_58953560_58954557
ENSMUSG00000025332.15_151016377_151023153_1	chrX	+	663	4	ISM	ENSMUSG00000025332.15	ENST00000541639.5	4353	25	-172	32117	92	-32117	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCCTATGAAATGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	151016376	151023153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021
ENSMUSG00000025332.15_151016401_151023157_1	chrX	+	442	2	ISM	ENSMUSG00000025332.15	ENST00000452825.7	5409	24	385	33882	116	-32113	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGAAATGTACCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	151016400	151023157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151016707_151023021
ENSMUSG00000025332.15_151016597_151045052_1	chrX	+	1638	12	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	48	10218	48	-10218	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTGGAGTGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	151016596	151045052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151016707_151020628_151020707_151022625_151022749_151025032_151025168_151027868_151027993_151028114_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932
ENSMUSG00000025332.15_151022624_151028279_1	chrX	+	737	5	ISM	ENSMUSG00000025332.15	ENSMUST00000112584.8	5900	26	6608	28485	6075	-26991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGACCCAGCCCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	151022623	151028279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097
ENSMUSG00000025332.15_151023066_151029343_1	chrX	+	661	5	ISM	ENSMUSG00000025332.15	ENSMUST00000082177.13	5520	25	6798	27425	6517	-25927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCTGCCTCCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	151023065	151029343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250
ENSMUSG00000025332.15_151025070_151049614_1	chrX	+	1547	11	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	8521	5656	8521	-5656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGCAAGACCACATGTT	NA	NA	NA	NA	NA	NA	NA	NA	151025069	151049614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151025168_151027868_151027993_151028114_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552
ENSMUSG00000025332.15_151027869_151031816_1	chrX	+	744	5	ISM	ENSMUSG00000025332.15	ENST00000404049.7	5646	26	11584	24966	11320	-23454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGGTGATTCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	151027868	151031816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657
ENSMUSG00000025332.15_151027916_151029311_1	chrX	+	303	3	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	11367	25959	11367	-25959	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGGCTGTGATGACAAT	NA	NA	NA	NA	NA	NA	NA	NA	151027915	151029311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151027993_151028114_151028280_151029250
ENSMUSG00000025332.15_151028194_151050139_1	chrX	+	1552	11	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	11645	5131	11645	-5131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCTACAGCGACTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	151028193	151050139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078
ENSMUSG00000025332.15_151031470_151051856_1	chrX	+	1541	11	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	14921	3414	14921	-3414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACAACAGCTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	151031469	151051856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050899_151050997_151051760
ENSMUSG00000025332.15_151031478_151036407_1	chrX	+	294	3	ISM	ENSMUSG00000025332.15	ENST00000541639.5	4353	25	14929	18863	14929	-18863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACCTGACAGGAGTATGC	NA	NA	NA	NA	NA	NA	NA	NA	151031477	151036407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151031544_151031657_151031817_151036338
ENSMUSG00000025332.15_151031704_151036511_1	chrX	+	286	2	ISM	ENSMUSG00000025332.15	ENST00000541639.5	4353	25	15155	18759	15155	-18759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACCGTGGCTGTATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	151031703	151036511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151031817_151036338
ENSMUSG00000025332.15_151031740_151052016_1	chrX	+	1545	10	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	15191	3254	15191	-3254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCTAGCCCTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	151031739	151052016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050899_151050997_151051760
ENSMUSG00000025332.15_151031752_151036568_1	chrX	+	295	2	ISM	ENSMUSG00000025332.15	ENST00000541639.5	4353	25	15203	18702	15203	-18702	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGGAGTTACTCTATTA	NA	NA	NA	NA	NA	NA	NA	NA	151031751	151036568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151031817_151036338
ENSMUSG00000025332.15_151031784_151052073_1	chrX	+	1558	10	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	15235	3197	15235	-3197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCTGAACGCTGGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	151031783	151052073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050899_151050997_151051760
ENSMUSG00000025332.15_151036504_151052773_1	chrX	+	1550	10	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	19955	2497	19955	-2497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCCAATATCCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	151036503	151052773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050899_151050997_151051760_151052120_151052710
ENSMUSG00000025332.15_151036732_151053410_1	chrX	+	1554	10	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	20183	1860	20183	-1860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGGGCTGGAGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	151036731	151053410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050899_151050997_151051760_151052120_151052710_151052850_151053347
ENSMUSG00000025332.15_151036787_151053472_1	chrX	+	1561	10	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	20238	1798	20238	-1798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGGCCTCCAAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	151036786	151053472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050899_151050997_151051760_151052120_151052710_151052850_151053347
ENSMUSG00000025332.15_151044988_151053759_1	chrX	+	1560	10	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	28439	1511	28439	-1511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTGTACAAATCTGACACA	NA	NA	NA	NA	NA	NA	NA	NA	151044987	151053759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050899_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689
ENSMUSG00000025332.15_151045241_151054068_1	chrX	+	1542	10	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	28692	1202	28692	-1202	internal_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACTCAGCCAAGCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	151045240	151054068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050899_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007
ENSMUSG00000025332.15_151045295_151054122_1	chrX	+	1542	10	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	28746	1148	28746	-1148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTATCTGCGTGTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	151045294	151054122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050899_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007
ENSMUSG00000025332.15_151049612_151054239_1	chrX	+	1541	9	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	33063	1031	33063	-1031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCAGTCTTCCCTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	151049611	151054239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151049735_151049812_151049938_151050078_151050227_151050899_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007
ENSMUSG00000025332.15_151049668_151054298_1	chrX	+	1544	9	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	33119	972	33119	-972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTCTGTGTATGCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	151049667	151054298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151049735_151049812_151049938_151050078_151050227_151050899_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007
ENSMUSG00000025332.15_151049678_151051985_1	chrX	+	661	5	ISM	ENSMUSG00000025332.15	ENST00000404049.7	5646	26	33393	4797	33129	-3285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCGGGGACTGTTGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	151049677	151051985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760
ENSMUSG00000025332.15_151049852_151054408_1	chrX	+	1548	8	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	33303	862	33303	-862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCACAGAGAGAGCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	151049851	151054408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151049938_151050078_151050227_151050899_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007
ENSMUSG00000025332.15_151054106_151055171_1	chrX	+	664	3	ISM	ENSMUSG00000025332.15	ENST00000404049.7	5646	26	37821	1611	37557	-99	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCTTGAGGTGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	151054105	151055171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151054590_151054855_151054935_151055070
ENSMUSG00000025332.15_151054168_151055232_1	chrX	+	663	3	ISM	ENSMUSG00000025332.15	ENST00000404049.7	5646	26	37883	1550	37619	-38	internal_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCCAGACTTGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	151054167	151055232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151054590_151054855_151054935_151055070
ENSMUSG00000025332.15_151054444_151055170_1	chrX	+	316	3	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	37895	100	37895	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCTGCTTGAGGTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	151054443	151055170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151054590_151054855_151054926_151055070
ENSMUSG00000025337.11_130274572_130284336_1	chr5	-	1506	5	NNC	ENSMUSG00000025337.11	novel	1548	5	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTTGCATTTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	130284336	130274571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284057
ENSMUSG00000025340.15_130216248_130237640_1	chr5	+	713	5	NNC	ENSMUSG00000025340.15	novel	2828	8	NA	NA	246	-5538	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATTCAAAAAAGAATCAGG	NA	NA	NA	NA	NA	NA	NA	NA	130216247	130237640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_130216428_130219717_130219885_130226787_130226958_130235849_130235932_130237526
ENSMUSG00000025340.15_130219717_130240742_1	chr5	+	682	6	ISM	ENSMUSG00000025340.15	ENSMUST00000026390.8	2828	8	3715	2436	3715	-2436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCCTGCATCACCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	130219716	130240742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130219885_130226790_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702
ENSMUSG00000025340.15_130219773_130240811_1	chr5	+	695	6	ISM	ENSMUSG00000025340.15	ENSMUST00000026390.8	2828	8	3771	2367	3771	-2367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCGATGACTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	130219772	130240811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130219885_130226790_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702
ENSMUSG00000025340.15_130226926_130241816_1	chr5	+	738	6	ISM	ENSMUSG00000025340.15	ENSMUST00000026390.8	2828	8	10924	1362	10924	-1362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGCAAATGTATAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	130226925	130241816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
ENSMUSG00000025340.15_130239280_130242048_1	chr5	+	708	3	ISM	ENSMUSG00000025340.15	ENSMUST00000026390.8	2828	8	23278	1130	23278	-1130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCTCAGGTGTACGCAG	NA	NA	NA	NA	NA	NA	NA	NA	130239279	130242048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130239357_130240702_130240960_130241674
ENSMUSG00000025340.15_130240786_130242192_1	chr5	+	692	2	ISM	ENSMUSG00000025340.15	ENSMUST00000026390.8	2828	8	24784	986	24784	-986	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTCTTTTTTCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	130240785	130242192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130240960_130241674
ENSMUSG00000025340.15_130240899_130242325_1	chr5	+	712	2	ISM	ENSMUSG00000025340.15	ENSMUST00000026390.8	2828	8	24897	853	24897	-853	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGACACTGTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	130240898	130242325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130240960_130241674
ENSMUSG00000025348.10_128765743_128794155_2	chr10	+	3634	24	FSM	ENSMUSG00000025348.10	ENST00000452168.6	3687	24	61	-8	61	4	multi-exon	TRUE	canonical	NA	NA	NA	NA	2081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGCTGCTTTATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	128765742	128794155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_128765814_128765940_128766060_128776550_128776807_128777313_128777446_128778676_128778885_128778986_128779181_128779421_128779511_128779619_128779748_128779873_128779970_128780109_128780172_128780272_128780443_128781273_128781424_128782155_128782272_128782667_128782861_128784685_128784767_128784851_128784932_128785029_128785105_128785242_128785346_128785831_128786009_128786172_128786302_128789311_128789426_128789628_128789728_128789814_128789941_128793489
ENSMUSG00000025348.10_128765941_128794155_1	chr10	+	3557	23	NNC	ENSMUSG00000025348.10	novel	3687	24	NA	NA	259	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2073	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGCTGCTTTATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	128765940	128794155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128766060_128776550_128776807_128777313_128777446_128778676_128778885_128778986_128779181_128779421_128779511_128779619_128779748_128779879_128779970_128780109_128780172_128780272_128780443_128781273_128781424_128782155_128782272_128782667_128782861_128784685_128784767_128784851_128784932_128785029_128785105_128785242_128785346_128785831_128786009_128786172_128786302_128789311_128789426_128789628_128789728_128789814_128789941_128793489
ENSMUSG00000025348.10_128769687_128776806_1	chr10	+	841	4	ISM	ENSMUSG00000025348.10	ENST00000555728.5	3677	26	-231	17108	0	-17108	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCATTCGCTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	128769686	128776806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128770064_128774908_128775037_128775136_128775217_128776550
ENSMUSG00000025348.10_128769925_128778771_1	chr10	+	830	6	ISM	ENSMUSG00000025348.10	ENSMUST00000218290.2	4020	25	236	15377	7	-15143	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGCGCAAGGATAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	128769924	128778771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128770064_128774908_128775037_128775136_128775217_128776550_128776807_128777313_128777446_128778676
ENSMUSG00000025348.10_128775162_128778769_1	chr10	+	524	4	ISM	ENSMUSG00000025348.10	ENSMUST00000099112.4	4013	25	5475	15382	5244	-15145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCTGCGCAAGGATAGC	NA	NA	NA	NA	NA	NA	NA	NA	128775161	128778769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128775217_128776550_128776807_128777690_128777811_128778676
ENSMUSG00000025348.10_128776605_128778725_1	chr10	+	503	4	ISM	ENSMUSG00000025348.10	ENST00000555728.5	3677	26	6687	15189	6687	-15189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGGCAGGGGCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	128776604	128778725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128776807_128777313_128777446_128777690_128777811_128778676
ENSMUSG00000025348.10_128776642_128779022_1	chr10	+	529	4	ISM	ENSMUSG00000025348.10	ENSMUST00000099112.4	4013	25	6955	15129	6724	-14892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACGCCAAGAAGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	128776641	128779022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128776807_128777690_128777811_128778676_128778885_128778986
ENSMUSG00000025348.10_128776648_128778788_1	chr10	+	523	4	ISM	ENSMUSG00000025348.10	ENST00000555728.5	3677	26	6730	15126	6730	-15126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAGCCGCTTGATACCTG	NA	NA	NA	NA	NA	NA	NA	NA	128776647	128778788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128776807_128777313_128777446_128777690_128777811_128778676
ENSMUSG00000025348.10_128776693_128779083_1	chr10	+	539	4	ISM	ENSMUSG00000025348.10	ENSMUST00000099112.4	4013	25	7006	15068	6775	-14831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATATCTCTCCTCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	128776692	128779083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128776807_128777690_128777811_128778676_128778885_128778986
ENSMUSG00000025348.10_128776715_128778858_1	chr10	+	526	4	ISM	ENSMUSG00000025348.10	ENST00000555728.5	3677	26	6797	15056	6797	-15056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGACTGATCTCAACAA	NA	NA	NA	NA	NA	NA	NA	NA	128776714	128778858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128776807_128777313_128777446_128777690_128777811_128778676
ENSMUSG00000025348.10_128776751_128779152_1	chr10	+	550	4	ISM	ENSMUSG00000025348.10	ENSMUST00000099112.4	4013	25	7064	14999	6833	-14762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGACCTCAACCAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	128776750	128779152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128776807_128777690_128777811_128778676_128778885_128778986
ENSMUSG00000025348.10_128777369_128779086_1	chr10	+	505	4	ISM	ENSMUSG00000025348.10	ENST00000555728.5	3677	26	7451	14828	7451	-14828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCTCTCCTCTCCGAAT	NA	NA	NA	NA	NA	NA	NA	NA	128777368	128779086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128777446_128777690_128777811_128778676_128778885_128778986
ENSMUSG00000025348.10_128782769_128785951_1	chr10	+	551	6	ISM	ENSMUSG00000025348.10	ENST00000555728.5	3677	26	12851	7963	12851	-7963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGGGGCCTGGCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	128782768	128785951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128782861_128784685_128784767_128784851_128784932_128785029_128785105_128785242_128785346_128785831
ENSMUSG00000025350.16_128749562_128754008_1	chr10	-	658	3	ISM	ENSMUSG00000025350.16	ENST00000547072.5	853	4	309	0	309	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGATTTTGAAAAGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	128754008	128749561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128749792_128749999_128750168_128753748
ENSMUSG00000025350.16_128749562_128754008_2	chr10	-	654	3	NIC	ENSMUSG00000025350.16	novel	853	4	NA	NA	309	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGATTTTGAAAAGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	128754008	128749561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_-_128749792_128750003_128750168_128753748
ENSMUSG00000025350.16_128749686_128754195_1	chr10	-	607	4	FSM	ENSMUSG00000025350.16	ENST00000547072.5	853	4	122	124	122	-124	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGCCAAGCTGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	128754195	128749685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128749792_128749999_128750168_128753748_128754008_128754121
ENSMUSG00000025350.16_128749686_128754197_1	chr10	-	605	4	NIC	ENSMUSG00000025350.16	novel	1089	4	NA	NA	120	-124	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGCCAAGCTGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	128754197	128749685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_-_128749792_128750003_128750168_128753748_128754008_128754121
ENSMUSG00000025350.16_128749686_128754246_1	chr10	-	658	4	FSM	ENSMUSG00000025350.16	ENST00000547072.5	853	4	71	124	71	-124	multi-exon	FALSE	canonical	NA	NA	NA	NA	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGCCAAGCTGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	128754246	128749685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128749792_128749999_128750168_128753748_128754008_128754121
ENSMUSG00000025350.16_128749686_128754250_1	chr10	-	658	4	NIC	ENSMUSG00000025350.16	novel	1089	4	NA	NA	67	-124	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGCCAAGCTGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	128754250	128749685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_-_128749792_128750003_128750168_128753748_128754008_128754121
ENSMUSG00000025350.16_128749715_128754296_1	chr10	-	679	4	FSM	ENSMUSG00000025350.16	ENST00000547072.5	853	4	21	153	21	-153	multi-exon	FALSE	canonical	NA	NA	NA	NA	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCCCCGAACACGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	128754296	128749714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128749792_128749999_128750168_128753748_128754008_128754121
ENSMUSG00000025350.16_128753793_128754418_1	chr10	-	512	2	ISM	ENSMUSG00000025350.16	ENST00000547072.5	853	4	-101	4231	13	-4231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTCCAAGTTTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	128754418	128753792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128754008_128754121
ENSMUSG00000025351.15_128745568_128748691_1	chr10	+	1061	8	NNC	ENSMUSG00000025351.15	novel	1063	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	25267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	128745567	128748691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128745828_128746272_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ENSMUSG00000025351.15_128745568_128748691_2	chr10	+	1064	8	NNC	ENSMUSG00000025351.15	novel	1063	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	25186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	128745567	128748691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747842_128747933_128748029_128748171_128748306_128748391_128748543
ENSMUSG00000025351.15_128745568_128748691_3	chr10	+	1064	8	NNC	ENSMUSG00000025351.15	novel	1063	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	25221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	128745567	128748691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748385_128748543
ENSMUSG00000025352.7_128719017_128722104_1	chr10	-	2427	2	ISM	ENSMUSG00000025352.7	ENSMUST00000026408.7	4062	3	5483	853	5483	-853	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGTGACTATCCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	128722104	128719016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128721356_128722016
ENSMUSG00000025352.7_128719175_128722231_1	chr10	-	2396	2	ISM	ENSMUSG00000025352.7	ENSMUST00000026408.7	4062	3	5356	1011	5356	-1011	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGGGGGGGAGAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	128722231	128719174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128721356_128722016
ENSMUSG00000025352.7_128719415_128727265_1	chr10	-	2489	3	FSM	ENSMUSG00000025352.7	ENSMUST00000026408.7	4062	3	322	1251	322	-1251	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATTCTGAGCACTTACC	NA	NA	NA	NA	NA	NA	NA	NA	128727265	128719414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128721356_128722016_128722415_128727115
ENSMUSG00000025353.6_128654165_128655938_1	chr10	-	836	2	ISM	ENSMUSG00000025353.6	ENSMUST00000219215.2	1051	4	1537	-186	1522	186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGCCCTCAGGAAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	128655938	128654164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128654885_128655822
ENSMUSG00000025353.6_128654421_128656346_1	chr10	-	833	3	ISM	ENSMUSG00000025353.6	ENSMUST00000219215.2	1051	4	1129	70	1114	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGTATATTTTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	128656346	128654420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128654885_128655822_128655975_128656129
ENSMUSG00000025353.6_128654421_128657463_1	chr10	-	923	4	FSM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	0	650	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGTATATTTTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	128657463	128654420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128654885_128655822_128655975_128656129_128656384_128657410
ENSMUSG00000025354.6_128641423_128642632_1	chr10	+	730	2	ISM	ENSMUSG00000025354.6	ENST00000357606.7	3056	7	13	11402	0	-10740	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGTGTCCAGTGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	128641422	128642632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128641557_128642036
ENSMUSG00000025354.6_128642780_128649940_1	chr10	+	744	2	ISM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	1235	3432	1235	-3432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGCCTTCAAAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	128642779	128649940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128643490_128649906
ENSMUSG00000025354.6_128642923_128650479_1	chr10	+	719	3	ISM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	1378	2893	1378	-2893	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTCGAAACTACAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	128642922	128650479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128643490_128649906_128650014_128650434
ENSMUSG00000025354.6_128642980_128650524_1	chr10	+	707	3	ISM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	1435	2848	1435	-2848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGCAGCAGATGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	128642979	128650524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128643490_128649906_128650014_128650434
ENSMUSG00000025354.6_128643085_128652675_1	chr10	+	727	4	ISM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	1540	697	1540	-697	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGCATGCTGGGCCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	128643084	128652675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128643490_128649906_128650014_128650434_128650555_128652580
ENSMUSG00000025354.6_128643247_128653098_1	chr10	+	763	6	ISM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	1702	274	1702	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGATTTCTTGAGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	128643246	128653098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ENSMUSG00000025354.6_128643247_128653124_1	chr10	+	789	6	ISM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	1702	248	1702	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTACCTCCGGGGCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	128643246	128653124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ENSMUSG00000025354.6_128643350_128653156_1	chr10	+	718	6	ISM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	1805	216	1805	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTGCCGCACCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	128643349	128653156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ENSMUSG00000025354.6_128643385_128653183_1	chr10	+	710	6	ISM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	1840	189	1840	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGACCACTTCGACCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	128643384	128653183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ENSMUSG00000025354.6_128643410_128653204_1	chr10	+	706	6	ISM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	1865	168	1865	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAACAGTTCAGTACCCA	NA	NA	NA	NA	NA	NA	NA	NA	128643409	128653204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ENSMUSG00000025354.6_128649948_128653372_1	chr10	+	753	5	ISM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	8403	0	8403	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGGAAACATTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	128649947	128653372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ENSMUSG00000025354.6_128652579_128653571_1	chr10	+	768	3	ISM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	11034	-199	11034	199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCTGTATGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	128652578	128653571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128652742_128652826_128652930_128653069
ENSMUSG00000025354.6_128652857_128653724_1	chr10	+	728	2	ISM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	11312	-352	11312	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATTTTGGAGACACAGA	NA	NA	NA	NA	NA	NA	NA	NA	128652856	128653724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128652930_128653069
ENSMUSG00000025354.6_128652911_128653780_1	chr10	+	730	2	ISM	ENSMUSG00000025354.6	ENST00000357606.7	3056	7	11501	254	11366	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTTATTGGTAAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	128652910	128653780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128652930_128653069
ENSMUSG00000025355.8_128626831_128630429_1	chr10	+	304	3	ISM	ENSMUSG00000025355.8	ENST00000548629.5	1474	9	7	4399	1	-4399	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGATGGATGACGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	128626830	128630429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128627014_128627453_128627540_128630394
ENSMUSG00000025355.8_128626984_128630773_1	chr10	+	263	4	ISM	ENSMUSG00000025355.8	ENST00000548629.5	1474	9	160	4055	154	-4055	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGCCTTTAAGTACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	128626983	128630773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128627014_128627453_128627540_128630394_128630526_128630757
ENSMUSG00000025355.8_128630426_128635437_1	chr10	+	1845	7	ISM	ENSMUSG00000025355.8	ENSMUST00000219404.2	2236	9	3647	217	3596	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTGGGTATTGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	128630425	128635437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128630526_128630688_128630905_128631428_128631675_128632257_128632384_128633995_128634161_128634304_128634433_128634573
ENSMUSG00000025355.8_128630452_128631475_1	chr10	+	268	3	ISM	ENSMUSG00000025355.8	ENST00000548629.5	1474	9	3628	3353	3622	-3353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATAAAGATGAACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	128630451	128631475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128630526_128630757_128630905_128631428
ENSMUSG00000025355.8_128631511_128634027_1	chr10	+	322	3	ISM	ENSMUSG00000025355.8	ENST00000548629.5	1474	9	4687	801	4681	-801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATGTGTGGACTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	128631510	128634027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128631675_128632257_128632384_128633995
ENSMUSG00000025355.8_128632311_128634387_1	chr10	+	321	3	ISM	ENSMUSG00000025355.8	ENST00000548629.5	1474	9	5487	441	5481	-441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTCTCTACTGGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	128632310	128634387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128632384_128633995_128634161_128634304
ENSMUSG00000025357.9_128556005_128567281_1	chr10	-	1768	15	ISM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	12663	2	12663	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTCCCGCAAGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	128567281	128556004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192
ENSMUSG00000025357.9_128556195_128568957_1	chr10	-	1684	16	ISM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	10987	192	10987	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCACCTTCACAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	128568957	128556194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851
ENSMUSG00000025357.9_128556307_128569193_1	chr10	-	1641	17	ISM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	10751	304	10751	-304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTTGGAGCTGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	128569193	128556306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133
ENSMUSG00000025357.9_128557114_128572086_1	chr10	-	1663	18	ISM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	7858	1111	7858	-1111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGCATTGGGCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	128572086	128557113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009
ENSMUSG00000025357.9_128559461_128579735_1	chr10	-	1642	18	ISM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	209	3458	209	-3458	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCCCAACAAAATGGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	128579735	128559460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664
ENSMUSG00000025357.9_128564125_128579944_1	chr10	-	1673	16	ISM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	0	8122	0	-8122	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGCAGGGGGGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	128579944	128564124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664
ENSMUSG00000025358.17_128534539_128538378_1	chr10	-	1088	5	ISM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	2521	726	2494	428	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAGATTGAAAAATAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	128538378	128534538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281
ENSMUSG00000025358.17_128534798_128537274_1	chr10	-	549	3	ISM	ENSMUSG00000025358.17	ENSMUST00000026415.9	2240	7	3598	990	3598	169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGCACTTAACCCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	128537274	128534797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128535080_128535340_128535545_128537211
ENSMUSG00000025358.17_128534810_128539851_1	chr10	-	1069	7	ISM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	1048	997	1021	157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTTGGCATTAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	128539851	128534809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794
ENSMUSG00000025358.17_128534967_128538452_1	chr10	-	590	4	ISM	ENSMUSG00000025358.17	ENSMUST00000026415.9	2240	7	2420	1159	2420	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGCCCTTTTCACCCGT	NA	NA	NA	NA	NA	NA	NA	NA	128538452	128534966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281
ENSMUSG00000025358.17_128535004_128540747_1	chr10	-	1063	8	FSM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	152	1191	125	-37	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAACCAGTGCCCCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	128540747	128535003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ENSMUSG00000025358.17_128535021_128538330_1	chr10	-	312	3	ISM	ENSMUSG00000025358.17	ENST00000440311.6	901	5	2542	54	2542	-54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTCCAGGATGTAACTA	NA	NA	NA	NA	NA	NA	NA	NA	128538330	128535020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128535080_128535340_128535545_128538281
ENSMUSG00000025358.17_128535341_128539696_1	chr10	-	598	4	ISM	ENSMUSG00000025358.17	ENSMUST00000026415.9	2240	7	1176	1533	1176	-374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGCCCAGAATAGATG	NA	NA	NA	NA	NA	NA	NA	NA	128539696	128535340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128535545_128537211_128537314_128538281_128538453_128539575
ENSMUSG00000025358.17_128535341_128540848_1	chr10	-	1088	7	ISM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	51	1528	24	-374	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGCCCAGAATAGATG	NA	NA	NA	NA	NA	NA	NA	NA	128540848	128535340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ENSMUSG00000025358.17_128535420_128539597_1	chr10	-	318	3	ISM	ENSMUSG00000025358.17	ENST00000440311.6	901	5	1275	453	1275	-453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCCCCAAGTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	128539597	128535419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128535545_128538281_128538453_128539575
ENSMUSG00000025358.17_128535451_128539837_1	chr10	-	531	5	ISM	ENSMUSG00000025358.17	ENSMUST00000026415.9	2240	7	1035	1643	1035	-484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTTACTTCTATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	128539837	128535450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794
ENSMUSG00000025358.17_128535484_128539641_1	chr10	-	298	3	ISM	ENSMUSG00000025358.17	ENST00000440311.6	901	5	1231	517	1231	-517	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTCTGGGGACCCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	128539641	128535483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128535545_128538281_128538453_128539575
ENSMUSG00000025358.17_128535533_128539696_1	chr10	-	304	3	ISM	ENSMUSG00000025358.17	ENST00000440311.6	901	5	1176	566	1176	-566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTATTCCCTGGAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	128539696	128535532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128535545_128538281_128538453_128539575
ENSMUSG00000025358.17_128538295_128540613_1	chr10	-	312	3	ISM	ENSMUSG00000025358.17	ENST00000440311.6	901	5	259	3328	259	-3328	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACACTCATGAGGTAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	128540613	128538294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128538453_128539575_128539697_128540580
ENSMUSG00000025358.17_128538347_128540663_1	chr10	-	310	3	ISM	ENSMUSG00000025358.17	ENST00000440311.6	901	5	209	3380	209	-3380	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCTGGCAGACTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	128540663	128538346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128538453_128539575_128539697_128540580
ENSMUSG00000025358.17_128538393_128540719_1	chr10	-	320	3	ISM	ENSMUSG00000025358.17	ENST00000440311.6	901	5	153	3426	153	-3426	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGACCTTAAGCCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	128540719	128538392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128538453_128539575_128539697_128540580
ENSMUSG00000025359.11_128542127_128551977_1	chr10	+	838	6	ISM	ENSMUSG00000025359.11	ENST00000449260.6	1728	10	-71	2880	0	-2880	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGCACTTGATGTCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	128542126	128551977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795
ENSMUSG00000025359.11_128549952_128552039_1	chr10	+	761	5	ISM	ENSMUSG00000025359.11	ENST00000449260.6	1728	10	7754	2818	7754	-2818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTGCCATTCCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	128549951	128552039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795
ENSMUSG00000025359.11_128549998_128552095_1	chr10	+	771	5	ISM	ENSMUSG00000025359.11	ENST00000449260.6	1728	10	7800	2762	7800	-2762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCTACATGCCAACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	128549997	128552095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795
ENSMUSG00000025359.11_128550267_128552204_1	chr10	+	737	4	ISM	ENSMUSG00000025359.11	ENST00000449260.6	1728	10	8069	2653	8069	-2653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCACAGTTGTACAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	128550266	128552204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128550298_128551089_128551225_128551395_128551558_128551795
ENSMUSG00000025359.11_128551168_128552324_1	chr10	+	748	3	ISM	ENSMUSG00000025359.11	ENST00000449260.6	1728	10	8970	2533	8970	-2533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACCCACAAGGCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	128551167	128552324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128551225_128551395_128551558_128551795
ENSMUSG00000025359.11_128551473_128553736_1	chr10	+	826	3	ISM	ENSMUSG00000025359.11	ENST00000449260.6	1728	10	9275	1121	9275	-1121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTTGCCTATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	128551472	128553736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128551558_128551795_128552420_128553619
ENSMUSG00000025359.11_128551856_128554011_1	chr10	+	766	3	ISM	ENSMUSG00000025359.11	ENST00000449260.6	1728	10	9658	846	9658	-846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	860	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCCTGCTGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	128551855	128554011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128552420_128553619_128553737_128553926
ENSMUSG00000025359.11_128551980_128554672_1	chr10	+	848	4	ISM	ENSMUSG00000025359.11	ENST00000449260.6	1728	10	9782	185	9782	-185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTACTTAAACATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	128551979	128554672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128552420_128553619_128553737_128553926_128554012_128554466
ENSMUSG00000025359.11_128552206_128554857_1	chr10	+	733	5	ISM	ENSMUSG00000025359.11	ENST00000449260.6	1728	10	10008	0	10008	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACACAGCTATCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	128552205	128554857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554746
ENSMUSG00000025359.11_128552295_128554850_1	chr10	+	615	5	ISM	ENSMUSG00000025359.11	ENST00000550464.5	1448	8	10097	7	10097	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAGGTAAGACACAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	128552294	128554850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768
ENSMUSG00000025362.7_128460406_128462447_1	chr10	-	512	4	FSM	ENSMUSG00000025362.7	ENSMUST00000026420.7	681	4	169	0	169	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCATCGGAGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	128462447	128460405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128460506_128461075_128461207_128461931_128462110_128462344
ENSMUSG00000025362.7_128461146_128462616_1	chr10	-	511	3	ISM	ENSMUSG00000025362.7	ENSMUST00000026420.7	681	4	0	740	0	-740	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGTTGTTAGGAATCGAT	NA	NA	NA	NA	NA	NA	NA	NA	128462616	128461145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128461207_128461931_128462110_128462344
ENSMUSG00000025364.14_128393635_128401738_1	chr10	-	2367	12	FSM	ENSMUSG00000025364.14	ENSMUST00000026425.13	2432	12	65	0	65	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTGTTCTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	128401738	128393634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ENSMUSG00000025364.14_128393756_128401818_1	chr10	-	2326	12	FSM	ENSMUSG00000025364.14	ENSMUST00000026425.13	2432	12	-15	121	-15	-119	multi-exon	FALSE	canonical	NA	NA	NA	NA	2903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGATGCTTGCTGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	128401818	128393755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ENSMUSG00000025366.9_128345834_128355534_1	chr10	-	2651	20	ISM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	6205	0	6074	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGGTGCACTGTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	128355534	128345833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467
ENSMUSG00000025366.9_128346015_128355554_1	chr10	-	2490	20	ISM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	6185	181	6054	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCCTGCATGGTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	128355554	128346014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467
ENSMUSG00000025366.9_128346125_128356224_1	chr10	-	2512	22	ISM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	5515	291	5384	216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAAACAGTGCTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	128356224	128346124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141
ENSMUSG00000025366.9_128346512_128357750_1	chr10	-	2537	26	ISM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	3989	678	3858	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGATAAGGGCGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	128357750	128346511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695
ENSMUSG00000025366.9_128347593_128358352_1	chr10	-	2540	26	ISM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	3387	1759	3256	-1252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAACCGAAGCACCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	128358352	128347592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289
ENSMUSG00000025366.9_128347737_128358984_1	chr10	-	2592	26	ISM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	2755	1903	2624	-1396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACCCTGGCCACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	128358984	128347736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942
ENSMUSG00000025366.9_128347837_128361359_1	chr10	-	2609	26	ISM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	380	2003	249	-1496	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGGCTCCCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	128361359	128347836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ENSMUSG00000025366.9_128347975_128361505_1	chr10	-	2617	26	ISM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	234	2141	103	-1634	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCCCCGGTCCTAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	128361505	128347974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ENSMUSG00000025366.9_128348030_128361505_1	chr10	-	2562	26	ISM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	234	2196	103	-1689	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTCCTCCTCGCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	128361505	128348029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ENSMUSG00000025366.9_128351553_128361739_1	chr10	-	2602	24	ISM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	0	5719	0	-5212	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTAAATTCCCACCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	128361739	128351552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ENSMUSG00000025366.9_128352925_128355353_1	chr10	-	619	6	ISM	ENSMUSG00000025366.9	ENST00000267113.4	3374	31	6255	6584	6255	-6584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAATCAGACCCCTACGT	NA	NA	NA	NA	NA	NA	NA	NA	128355353	128352924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355114_128355296
ENSMUSG00000025366.9_128353494_128356185_1	chr10	-	603	7	ISM	ENSMUSG00000025366.9	ENST00000267113.4	3374	31	5423	7153	5423	-7153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATGCGGGTATGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	128356185	128353493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128353634_128354796_128354884_128355010_128355114_128355296_128355390_128355467_128355555_128355657_128355707_128356141
ENSMUSG00000025366.9_128355047_128356851_1	chr10	-	632	7	ISM	ENSMUSG00000025366.9	ENST00000267113.4	3374	31	4757	8706	4757	-8706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTATCAGTTCAGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	128356851	128355046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128355114_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775
ENSMUSG00000025369.16_128299751_128319165_1	chr10	+	1800	17	ISM	ENSMUSG00000025369.16	ENSMUST00000105235.10	4032	28	4561	6060	4561	-6060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATCGCAGGGACTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	128299750	128319165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043
ENSMUSG00000025369.16_128301304_128319972_1	chr10	+	1784	17	ISM	ENSMUSG00000025369.16	ENSMUST00000105235.10	4032	28	6114	5253	6114	-5253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGGAAGAAGCAAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	128301303	128319972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947
ENSMUSG00000025369.16_128316807_128324914_1	chr10	+	1790	12	ISM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	21644	1127	21617	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACCCTCCCTCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	128316806	128324914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ENSMUSG00000025369.16_128318004_128325033_1	chr10	+	1790	11	ISM	ENSMUSG00000025369.16	ENSMUST00000099131.11	4562	29	22827	958	22814	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTCTGACTAAAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	128318003	128325033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ENSMUSG00000025369.16_128318601_128325225_1	chr10	+	1803	9	ISM	ENSMUSG00000025369.16	ENSMUST00000099131.11	4562	29	23424	766	23411	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTTTTAATTATTATT	NA	NA	NA	NA	NA	NA	NA	NA	128318600	128325225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ENSMUSG00000025369.16_128318727_128325306_1	chr10	+	1758	9	ISM	ENSMUSG00000025369.16	ENSMUST00000099131.11	4562	29	23550	685	23537	81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGAATAGGGCACCGA	NA	NA	NA	NA	NA	NA	NA	NA	128318726	128325306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ENSMUSG00000025369.16_128319128_128325512_1	chr10	+	1795	8	ISM	ENSMUSG00000025369.16	ENSMUST00000099131.11	4562	29	23951	479	23938	287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGGAAATGTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128319127	128325512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ENSMUSG00000025369.16_128320192_128325806_1	chr10	+	1784	5	ISM	ENSMUSG00000025369.16	ENSMUST00000099131.11	4562	29	25015	185	25002	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGCCTCTGCACTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	128320191	128325806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ENSMUSG00000025369.16_128320251_128325857_1	chr10	+	1776	5	ISM	ENSMUSG00000025369.16	ENSMUST00000099131.11	4562	29	25074	134	25061	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAATTCCAGGCCGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	128320250	128325857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ENSMUSG00000025369.16_128321476_128326004_1	chr10	+	1794	4	ISM	ENSMUSG00000025369.16	ENSMUST00000099131.11	4562	29	26299	-13	26286	13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTTTTTATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	128321475	128326004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128321564_128323123_128323506_128323802_128323887_128324764
ENSMUSG00000025371.13_119804656_119809677_1	chr11	+	840	8	FSM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	20	697	20	-697	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTTTCTCCTTCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	119804655	119809677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_119804764_119806238_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
ENSMUSG00000025371.13_119804656_119809731_1	chr11	+	894	8	FSM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	20	643	20	-643	multi-exon	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCTGTGGACCCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	119804655	119809731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_119804764_119806238_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
ENSMUSG00000025371.13_119806275_119809874_1	chr11	+	893	7	ISM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	1639	500	1639	-500	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGCTGAGCAGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	119806274	119809874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
ENSMUSG00000025371.13_119806290_119809874_1	chr11	+	878	7	ISM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	1654	500	1654	-500	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGCTGAGCAGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	119806289	119809874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
ENSMUSG00000025371.13_119806850_119810052_1	chr11	+	910	5	ISM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	2214	322	2214	-322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAGGAGCCCGGCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	119806849	119810052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
ENSMUSG00000025372.17_119884650_119887859_1	chr11	+	395	3	ISM	ENSMUSG00000025372.17	ENSMUST00000106231.8	4005	13	51061	5588	51061	-5588	internal_fragment	TRUE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAACACACTCCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	119884649	119887859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119884675_119887348_119887574_119887714
ENSMUSG00000025372.17_119887744_119891927_1	chr11	+	670	6	ISM	ENSMUSG00000025372.17	ENSMUST00000075180.12	3518	14	54155	1520	54155	-1520	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGACGCTGACCCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	119887743	119891927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119891899
ENSMUSG00000025372.17_119887815_119891991_1	chr11	+	663	6	ISM	ENSMUSG00000025372.17	ENSMUST00000075180.12	3518	14	54226	1456	54226	-1456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTCTCGTTGGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	119887814	119891991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119891899
ENSMUSG00000025372.17_119887874_119892050_1	chr11	+	663	6	ISM	ENSMUSG00000025372.17	ENSMUST00000075180.12	3518	14	54285	1397	54285	-1397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGATCCCAGACTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	119887873	119892050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119891899
ENSMUSG00000025372.17_119888497_119892239_1	chr11	+	627	5	ISM	ENSMUSG00000025372.17	ENSMUST00000075180.12	3518	14	54908	1208	54908	-1208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTGGCCACGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	119888496	119892239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119891899
ENSMUSG00000025372.17_119889471_119897304_1	chr11	+	424	5	ISM	ENSMUSG00000025372.17	ENSMUST00000106233.2	2442	15	55882	304	55882	-304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCATGTTCCTGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	119889470	119897304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119889529_119889960_119890124_119891377_119891413_119893863_119893912_119897184
ENSMUSG00000025372.17_119890051_119892451_1	chr11	+	660	3	ISM	ENSMUSG00000025372.17	ENSMUST00000075180.12	3518	14	56462	996	56462	-996	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTGGGGGGATCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	119890050	119892451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119890124_119891377_119891413_119891899
ENSMUSG00000025372.17_119890061_119897437_1	chr11	+	351	3	ISM	ENSMUSG00000025372.17	ENSMUST00000026436.10	2394	14	56472	171	56472	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGCACTTGGGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	119890060	119897437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119890124_119891377_119891413_119897184
ENSMUSG00000025373.15_128247615_128272392_1	chr10	+	704	5	ISM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	0	3815	0	-3815	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGGTCCAGCAGCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	128247614	128272392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336
ENSMUSG00000025373.15_128264491_128274021_1	chr10	+	664	5	ISM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	16876	2186	16876	-2186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGCTGTCATCAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	128264490	128274021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ENSMUSG00000025373.15_128271281_128274207_1	chr10	+	669	4	ISM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	23666	2000	23666	-2000	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGATGGCCTGTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	128271280	128274207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128271454_128272336_128272473_128273176_128273281_128273951
ENSMUSG00000025373.15_128271333_128274257_1	chr10	+	667	4	ISM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	23718	1950	23718	-1950	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGCTCGTCATGATAT	NA	NA	NA	NA	NA	NA	NA	NA	128271332	128274257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128271454_128272336_128272473_128273176_128273281_128273951
ENSMUSG00000025373.15_128272423_128274452_1	chr10	+	655	3	ISM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	24808	1755	24808	-1755	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCCTTTCAGCGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	128272422	128274452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128272473_128273176_128273281_128273951
ENSMUSG00000025373.15_128273269_128274592_1	chr10	+	653	2	ISM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	25654	1615	25654	-1615	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAGAAAGCACAAAGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	128273268	128274592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128273281_128273951
ENSMUSG00000025374.14_128237459_128245217_1	chr10	-	796	6	FSM	ENSMUSG00000025374.14	ENSMUST00000164199.8	1371	6	380	195	374	-116	multi-exon	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGGAGGGGTTGGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	128245217	128237458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115
ENSMUSG00000025374.14_128237639_128245743_1	chr10	-	755	7	FSM	ENSMUSG00000025374.14	ENSMUST00000026439.14	1130	7	0	375	0	-296	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGTCAGCAACGGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	128245743	128237638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115_128245218_128245604
ENSMUSG00000025377.15_119984597_119986231_1	chr11	-	361	3	ISM	ENSMUSG00000025377.15	ENSMUST00000093901.12	2770	13	3326	3240	3326	-3240	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCCTCGGACTCGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	119986231	119984596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119984692_119984939_119985144_119986169
ENSMUSG00000025377.15_119984986_119986697_1	chr11	-	374	4	ISM	ENSMUSG00000025377.15	ENSMUST00000093901.12	2770	13	2860	3629	2860	-3629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAACCCTGGGAATCTACT	NA	NA	NA	NA	NA	NA	NA	NA	119986697	119984985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119985144_119986169_119986242_119986359_119986436_119986629
ENSMUSG00000025381.4_128158328_128163423_1	chr10	+	1378	6	NNC	ENSMUSG00000025381.4	novel	1383	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTATTCAGTGTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	128158327	128163423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128158645_128159198_128159312_128159452_128159563_128161932_128162137_128162445_128162543_128162886
ENSMUSG00000025381.4_128158328_128163423_2	chr10	+	1377	6	NNC	ENSMUSG00000025381.4	novel	1383	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTATTCAGTGTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	128158327	128163423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128158645_128159198_128159312_128159459_128159569_128161932_128162137_128162445_128162543_128162886
ENSMUSG00000025381.4_128158328_128163423_3	chr10	+	1378	6	NNC	ENSMUSG00000025381.4	novel	1383	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1749	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTATTCAGTGTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	128158327	128163423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128158645_128159198_128159306_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ENSMUSG00000025381.4_128158328_128163423_4	chr10	+	1378	6	NNC	ENSMUSG00000025381.4	novel	1383	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTATTCAGTGTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	128158327	128163423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128158645_128159204_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ENSMUSG00000025384.16_120260388_120269535_2	chr11	-	3138	10	FSM	ENSMUSG00000025384.16	ENSMUST00000026448.10	3193	10	55	0	55	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	120269535	120260387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269153_120269273_120269367
ENSMUSG00000025393.13_127919142_127926260_1	chr10	+	1911	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGGGCCTTGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	127919141	127926260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_127919323_127919760_127919944_127920170_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ENSMUSG00000025393.13_127919142_127926260_2	chr10	+	1910	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	22888	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGGGCCTTGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	127919141	127926260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922284_127924189_127924403_127924825_127925028_127925887
ENSMUSG00000025393.13_127919175_127926260_1	chr10	+	1877	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	22113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGGGCCTTGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	127919174	127926260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922284_127924189_127924403_127924825_127925028_127925887
ENSMUSG00000025393.13_127919175_127926260_2	chr10	+	1878	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGGGCCTTGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	127919174	127926260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_127919323_127919760_127919944_127920170_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ENSMUSG00000025403.6_127352992_127355948_1	chr10	-	1778	9	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	2307	0	2307	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	127355948	127352991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839
ENSMUSG00000025403.6_127353173_127356258_1	chr10	-	1741	10	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	1997	181	1997	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGGGAGGGGTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	127356258	127353172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206
ENSMUSG00000025403.6_127353274_127356874_1	chr10	-	1756	11	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	1381	282	1381	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGACTCCCCTCCCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	127356874	127353273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786
ENSMUSG00000025403.6_127353407_127358233_1	chr10	-	1801	12	FSM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	22	415	22	-399	multi-exon	FALSE	canonical	NA	NA	NA	NA	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTAGCTGTGAGTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	127358233	127353406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ENSMUSG00000025403.6_127355889_127356847_1	chr10	-	293	3	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	1408	2897	1408	-2881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGCCTCATGATCGAATC	NA	NA	NA	NA	NA	NA	NA	NA	127356847	127355888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127356041_127356206_127356287_127356786
ENSMUSG00000025403.6_127355940_127356897_1	chr10	-	292	3	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	1358	2948	1358	-2932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCCATACTCAGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	127356897	127355939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127356041_127356206_127356287_127356786
ENSMUSG00000025410.11_127102237_127114277_1	chr10	+	1253	13	ISM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	-19	3542	-19	-3542	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGGGTCTTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	127102236	127114277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185
ENSMUSG00000025410.11_127102356_127117443_1	chr10	+	1308	14	FSM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	100	376	100	-376	multi-exon	FALSE	canonical	NA	NA	NA	NA	3057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACAAGGGCAAGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	127102355	127117443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ENSMUSG00000025410.11_127103283_127117443_1	chr10	+	1254	13	NNC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	1027	-376	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACAAGGGCAAGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	127103282	127117443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117275
ENSMUSG00000025410.11_127112281_127117819_1	chr10	+	1275	9	NNC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	10025	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAGAGTTTCAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	127112280	127117819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117275
ENSMUSG00000025410.11_127112288_127117705_1	chr10	+	1160	9	ISM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	10032	114	10032	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGCACTGAGAGACGTGC	NA	NA	NA	NA	NA	NA	NA	NA	127112287	127117705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ENSMUSG00000025410.11_127112336_127117819_1	chr10	+	1226	9	ISM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	10080	0	10080	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAGAGTTTCAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	127112335	127117819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ENSMUSG00000025410.11_127112351_127117819_1	chr10	+	1205	9	NNC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	10095	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1916	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAGAGTTTCAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	127112350	127117819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117275
ENSMUSG00000025410.11_127112571_127117820_1	chr10	+	1149	8	ISM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	10315	-1	10315	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCAGAGTTTCAAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	127112570	127117820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ENSMUSG00000025413.14_106519888_106524744_1	chr4	-	676	3	ISM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	11397	435	11319	373	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCTGGAGGAAAGCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	106524744	106519887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106520429_106522852_106522936_106524692
ENSMUSG00000025413.14_106519997_106525313_1	chr4	-	677	4	ISM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	10828	544	10750	264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGTGGCATCGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	106525313	106519996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233
ENSMUSG00000025413.14_106520029_106525384_1	chr4	-	716	4	ISM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	10757	576	10679	232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACTGTCGCAGGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	106525384	106520028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233
ENSMUSG00000025413.14_106520100_106525422_1	chr4	-	683	4	ISM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	10719	647	10641	161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAGTCCATCTCTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	106525422	106520099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233
ENSMUSG00000025413.14_106520261_106528945_1	chr4	-	763	6	ISM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	7196	808	7118	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGAGTGTAGCACTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	106528945	106520260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820
ENSMUSG00000025413.14_106520371_106531629_1	chr4	-	675	7	ISM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	4512	918	4434	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGAATTACCTCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	106531629	106520370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607
ENSMUSG00000025413.14_106522874_106533835_1	chr4	-	693	7	ISM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	2306	3421	2228	-2613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTGCTGCAGCACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	106533835	106522873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794
ENSMUSG00000025413.14_106524691_106533956_1	chr4	-	754	6	ISM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	2185	5238	2107	-4430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGTTTTATTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	106533956	106524690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794
ENSMUSG00000025413.14_106525344_106535499_1	chr4	-	678	6	ISM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	642	5891	564	-5083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCAGGCTAAGTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	106535499	106525343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381
ENSMUSG00000025417.9_127033681_127036982_1	chr10	-	1933	6	ISM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	10442	745	10434	-745	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGTAAAGCCAGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	127036982	127033680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907
ENSMUSG00000025417.9_127033747_127037020_1	chr10	-	1905	6	ISM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	10404	811	10396	-811	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATTAATGCACGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	127037020	127033746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907
ENSMUSG00000025417.9_127033858_127037054_1	chr10	-	1828	6	ISM	ENSMUSG00000025417.9	ENST00000550465.5	1517	10	10362	-806	10362	759	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGTGTCTCCCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	127037054	127033857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907
ENSMUSG00000025417.9_127034029_127044767_1	chr10	-	1927	9	ISM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	2657	1093	2649	588	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGGGCTTCTTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	127044767	127034028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738
ENSMUSG00000025417.9_127034165_127047226_1	chr10	-	1880	10	FSM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	198	1229	190	452	multi-exon	FALSE	canonical	NA	NA	NA	NA	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCAGGTGTGAGACTCG	NA	NA	NA	NA	NA	NA	NA	NA	127047226	127034164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
ENSMUSG00000025417.9_127034232_127047283_1	chr10	-	1870	10	FSM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	141	1296	133	385	multi-exon	FALSE	canonical	NA	NA	NA	NA	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACGTCCACCTCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	127047283	127034231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
ENSMUSG00000025417.9_127034311_127047424_1	chr10	-	1932	10	FSM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	0	1375	0	306	multi-exon	FALSE	canonical	NA	NA	NA	NA	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATGCAGATGATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	127047424	127034310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
ENSMUSG00000025417.9_127034729_127047248_1	chr10	-	1284	10	FSM	ENSMUSG00000025417.9	ENST00000550465.5	1517	10	168	65	168	-65	multi-exon	TRUE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCCTCCCTCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	127047248	127034728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042549_127044761_127044837_127047206
ENSMUSG00000025417.9_127034832_127047248_1	chr10	-	1181	10	FSM	ENSMUSG00000025417.9	ENST00000550465.5	1517	10	168	168	168	-168	multi-exon	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAGGCTGCAGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	127047248	127034831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042549_127044761_127044837_127047206
ENSMUSG00000025417.9_127034832_127047424_1	chr10	-	1357	10	FSM	ENSMUSG00000025417.9	ENST00000550465.5	1517	10	-8	168	0	-168	multi-exon	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAGGCTGCAGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	127047424	127034831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042549_127044761_127044837_127047206
ENSMUSG00000025417.9_127035588_127044754_1	chr10	-	551	6	ISM	ENSMUSG00000025417.9	ENST00000422156.7	1542	9	2730	971	2662	-924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCGCCCTGGTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	127044754	127035587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127042482_127042580_127044738
ENSMUSG00000025417.9_127035632_127044823_1	chr10	-	576	6	ISM	ENSMUSG00000025417.9	ENST00000422156.7	1542	9	2661	1015	2593	-968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGAGGAGTCTGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	127044823	127035631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127042482_127042580_127044738
ENSMUSG00000025417.9_127036053_127047248_1	chr10	-	537	6	ISM	ENSMUSG00000025417.9	ENST00000422156.7	1542	9	236	1436	168	-1389	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCAGGGTGCTCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	127047248	127036052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127036167_127036708_127036748_127036907_127037055_127042482_127042580_127044738_127044837_127047206
ENSMUSG00000025417.9_127036707_127047424_1	chr10	-	601	5	ISM	ENSMUSG00000025417.9	ENST00000422156.7	1542	9	60	2090	0	-2043	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCCTTTTAGGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	127047424	127036706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127036748_127036907_127037055_127042482_127042580_127044738_127044837_127047206
ENSMUSG00000025420.14_77065081_77092517_1	chr18	-	892	8	ISM	ENSMUSG00000025420.14	ENST00000356157.12	1557	15	14432	-5	14432	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCCAGCCTGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	77092517	77065080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_77065222_77066125_77066229_77067694_77067858_77082089_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418
ENSMUSG00000025420.14_77065156_77095225_1	chr18	-	839	9	ISM	ENSMUSG00000025420.14	ENST00000356157.12	1557	15	11724	70	11724	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACACCAAGCCTTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	77095225	77065155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_77065222_77066125_77066229_77067694_77067858_77082089_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203
ENSMUSG00000025420.14_77066157_77095281_1	chr18	-	798	8	ISM	ENSMUSG00000025420.14	ENST00000356157.12	1557	15	11668	1071	11668	-1071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCAGTGTGCTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	77095281	77066156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_77066229_77067694_77067858_77082089_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203
ENSMUSG00000025420.14_77066157_77095579_1	chr18	-	897	9	ISM	ENSMUSG00000025420.14	ENST00000356157.12	1557	15	11370	1071	11370	-1071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCAGTGTGCTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	77095579	77066156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_77066229_77067694_77067858_77082089_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480
ENSMUSG00000025420.14_77067774_77098712_1	chr18	-	816	9	ISM	ENSMUSG00000025420.14	ENST00000356157.12	1557	15	8237	2688	8237	-2688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCACTGGCTGCCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	77098712	77067773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_77067858_77082089_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642
ENSMUSG00000025420.14_77067821_77099733_1	chr18	-	846	10	ISM	ENSMUSG00000025420.14	ENST00000356157.12	1557	15	7216	2735	7216	-2735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTCTGGTTGATCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	77099733	77067820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_77067858_77082089_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099685
ENSMUSG00000025420.14_77082089_77099800_1	chr18	-	877	9	ISM	ENSMUSG00000025420.14	ENST00000356157.12	1557	15	7149	17003	7149	-1194	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGACATCCAGAGAACATG	NA	NA	NA	NA	NA	NA	NA	NA	77099800	77082088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099685
ENSMUSG00000025420.14_77082181_77103740_1	chr18	-	828	10	ISM	ENSMUSG00000025420.14	ENST00000356157.12	1557	15	3209	17095	3209	-1286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGGATGAAGACGGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	77103740	77082180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099685_77099801_77103697
ENSMUSG00000025420.14_77085294_77105262_1	chr18	-	915	10	ISM	ENSMUSG00000025420.14	ENST00000356157.12	1557	15	1687	20208	1687	-4399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGACAGGGTTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	77105262	77085293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099685_77099801_77103697_77103741_77105156
ENSMUSG00000025420.14_77090237_77106919_1	chr18	-	812	10	ISM	ENSMUSG00000025420.14	ENST00000356157.12	1557	15	30	25151	30	7500	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTGCTGGCCAAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	77106919	77090236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099685_77099801_77103697_77103741_77105156_77105324_77106880
ENSMUSG00000025421.16_77031823_77058359_1	chr18	+	798	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	35	4644	0	-742	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGAGAGCTTCCCTCACGC	NA	NA	NA	NA	NA	NA	NA	NA	77031822	77058359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUSG00000025421.16_77038868_77058530_1	chr18	+	851	6	ISM	ENSMUSG00000025421.16	ENSMUST00000026485.15	1640	8	6788	571	6735	-571	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGCAGCCAACCCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	77038867	77058530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUSG00000025421.16_77042732_77058648_1	chr18	+	859	5	ISM	ENSMUSG00000025421.16	ENSMUST00000026485.15	1640	8	10652	453	10599	-453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTGGAGGAGAAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	77042731	77058648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUSG00000025421.16_77042793_77058712_1	chr18	+	862	5	ISM	ENSMUSG00000025421.16	ENSMUST00000026485.15	1640	8	10713	389	10660	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGAGGATCCTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	77042792	77058712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUSG00000025421.16_77052766_77058910_1	chr18	+	866	3	ISM	ENSMUSG00000025421.16	ENSMUST00000026485.15	1640	8	20686	191	20633	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTATTCCCAGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	77052765	77058910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_77052964_77054839_77054904_77058306
ENSMUSG00000025421.16_77052853_77058997_1	chr18	+	866	3	ISM	ENSMUSG00000025421.16	ENSMUST00000026485.15	1640	8	20773	104	20720	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATATTTCCATTAATAAC	NA	NA	NA	NA	NA	NA	NA	NA	77052852	77058997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_77052964_77054839_77054904_77058306
ENSMUSG00000025422.11_126911320_126923294_1	chr10	+	1037	10	ISM	ENSMUSG00000025422.11	ENST00000257897.7	4120	18	105	5910	105	-5744	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCCTTGAACAAAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	126911319	126923294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126911461_126918232_126918292_126918834_126918923_126919076_126919163_126919299_126919448_126920981_126921117_126921419_126921530_126922795_126922955_126923102_126923190_126923270
ENSMUSG00000025422.11_126911388_126923332_1	chr10	+	1007	10	ISM	ENSMUSG00000025422.11	ENST00000257897.7	4120	18	173	5872	173	-5706	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCCAGCAATGGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	126911387	126923332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126911461_126918232_126918292_126918834_126918923_126919076_126919163_126919299_126919448_126920981_126921117_126921419_126921530_126922795_126922955_126923102_126923190_126923270
ENSMUSG00000025422.11_126918243_126923805_1	chr10	+	1019	10	ISM	ENSMUSG00000025422.11	ENSMUST00000039259.7	5633	19	3467	5233	3467	-5233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTCCCAGGCAAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	126918242	126923805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126918292_126918834_126918923_126919076_126919163_126919299_126919448_126920981_126921117_126921419_126921530_126922795_126922955_126923102_126923190_126923270_126923376_126923753
ENSMUSG00000025422.11_126919131_126924143_1	chr10	+	1005	9	ISM	ENSMUSG00000025422.11	ENSMUST00000039259.7	5633	19	4355	4895	4355	-4895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCAAGCACCTCTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	126919130	126924143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126919163_126919299_126919448_126920981_126921117_126921419_126921530_126922795_126922955_126923102_126923190_126923270_126923376_126923753_126923917_126924077
ENSMUSG00000025422.11_126919388_126925153_1	chr10	+	994	9	ISM	ENSMUSG00000025422.11	ENSMUST00000039259.7	5633	19	4612	3885	4612	-3885	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGTGAAGAAGCAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	126919387	126925153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126919448_126920981_126921117_126921419_126921530_126922795_126922955_126923102_126923190_126923270_126923376_126923753_126923917_126924077_126924198_126925098
ENSMUSG00000025422.11_126921000_126926305_1	chr10	+	1000	9	ISM	ENSMUSG00000025422.11	ENSMUST00000217941.2	5573	18	6224	2733	6224	-2733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTCCTGATCGTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	126920999	126926305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126921117_126921419_126921530_126922795_126922955_126923102_126923190_126923270_126923376_126923753_126923917_126924077_126924198_126925098_126925228_126926295
ENSMUSG00000025422.11_126921045_126926365_1	chr10	+	1015	9	ISM	ENSMUSG00000025422.11	ENSMUST00000217941.2	5573	18	6269	2673	6269	-2673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCGGGATGCTTGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	126921044	126926365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126921117_126921419_126921530_126922795_126922955_126923102_126923190_126923270_126923376_126923753_126923917_126924077_126924198_126925098_126925228_126926295
ENSMUSG00000025422.11_126922793_126926766_1	chr10	+	1029	9	ISM	ENSMUSG00000025422.11	ENSMUST00000217941.2	5573	18	8017	2272	8017	-2272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCGCACTCATCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	126922792	126926766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126922955_126923102_126923190_126923270_126923376_126923753_126923917_126924077_126924198_126925098_126925228_126926295_126926445_126926540_126926632_126926743
ENSMUSG00000025422.11_126922866_126926801_1	chr10	+	991	9	ISM	ENSMUSG00000025422.11	ENSMUST00000217941.2	5573	18	8090	2237	8090	-2237	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCGGAACCTGGGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	126922865	126926801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126922955_126923102_126923190_126923270_126923376_126923753_126923917_126924077_126924198_126925098_126925228_126926295_126926445_126926540_126926632_126926743
ENSMUSG00000025422.11_126922908_126926868_1	chr10	+	1016	9	ISM	ENSMUSG00000025422.11	ENSMUST00000217941.2	5573	18	8132	2170	8132	-2170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCCTGGTGCTGACGGC	NA	NA	NA	NA	NA	NA	NA	NA	126922907	126926868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126922955_126923102_126923190_126923270_126923376_126923753_126923917_126924077_126924198_126925098_126925228_126926295_126926445_126926540_126926632_126926743
ENSMUSG00000025422.11_126923312_126927128_1	chr10	+	1006	8	ISM	ENSMUSG00000025422.11	ENSMUST00000217941.2	5573	18	8536	1910	8536	-1910	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGAGGAGCCGCTGGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	126923311	126927128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126923376_126923753_126923917_126924077_126924198_126925098_126925228_126926295_126926445_126926540_126926632_126926743_126926967_126927061
ENSMUSG00000025422.11_126923803_126927250_1	chr10	+	1015	7	ISM	ENSMUSG00000025422.11	ENSMUST00000217941.2	5573	18	9027	1788	9027	-1788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGCTCGCCGCTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	126923802	126927250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126923917_126924077_126924198_126925098_126925228_126926295_126926445_126926540_126926632_126926743_126926967_126927061
ENSMUSG00000025422.11_126923867_126927302_1	chr10	+	1003	7	ISM	ENSMUSG00000025422.11	ENSMUST00000217941.2	5573	18	9091	1736	9091	-1736	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTGTTGTGGGTACG	NA	NA	NA	NA	NA	NA	NA	NA	126923866	126927302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126923917_126924077_126924198_126925098_126925228_126926295_126926445_126926540_126926632_126926743_126926967_126927061
ENSMUSG00000025422.11_126924119_126927505_1	chr10	+	994	7	ISM	ENSMUSG00000025422.11	ENSMUST00000217941.2	5573	18	9343	1533	9343	-1533	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCAGCTGTGTGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	126924118	126927505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126924198_126925098_126925228_126926295_126926445_126926540_126926632_126926743_126926967_126927061_126927318_126927438
ENSMUSG00000025422.11_126924172_126927569_1	chr10	+	1005	7	ISM	ENSMUSG00000025422.11	ENSMUST00000217941.2	5573	18	9396	1469	9396	-1469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACGCCCAGCGCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	126924171	126927569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126924198_126925098_126925228_126926295_126926445_126926540_126926632_126926743_126926967_126927061_126927318_126927438
ENSMUSG00000025422.11_126925196_126927676_1	chr10	+	989	6	ISM	ENSMUSG00000025422.11	ENSMUST00000217941.2	5573	18	10420	1362	10420	-1362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTGCCCAGCAGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	126925195	126927676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126925228_126926295_126926445_126926540_126926632_126926743_126926967_126927061_126927318_126927438
ENSMUSG00000025422.11_126926380_126927800_1	chr10	+	997	5	ISM	ENSMUSG00000025422.11	ENSMUST00000039259.7	5633	19	11604	1238	11604	-1238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTCTACCCCCACGAG	NA	NA	NA	NA	NA	NA	NA	NA	126926379	126927800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126926445_126926540_126926632_126926743_126926967_126927061_126927318_126927438
ENSMUSG00000025422.11_126926602_126927970_1	chr10	+	1041	4	ISM	ENSMUSG00000025422.11	ENSMUST00000039259.7	5633	19	11826	1068	11826	-1068	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGCAGCTGTTCCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	126926601	126927970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126926632_126926743_126926967_126927061_126927318_126927438
ENSMUSG00000025422.11_126926894_126928103_1	chr10	+	994	3	ISM	ENSMUSG00000025422.11	ENSMUST00000039259.7	5633	19	12118	935	12118	-935	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAACTCCACGCCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	126926893	126928103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126926967_126927061_126927318_126927438
ENSMUSG00000025422.11_126927128_126928251_1	chr10	+	1003	2	ISM	ENSMUSG00000025422.11	ENSMUST00000039259.7	5633	19	12352	787	12352	-787	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGGAGGGGTCCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	126927127	126928251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126927318_126927438
ENSMUSG00000025422.11_126927186_126928320_1	chr10	+	1014	2	ISM	ENSMUSG00000025422.11	ENSMUST00000039259.7	5633	19	12410	718	12410	-718	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTATCTTATGAATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	126927185	126928320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126927318_126927438
ENSMUSG00000025422.11_126927252_126928369_1	chr10	+	997	2	ISM	ENSMUSG00000025422.11	ENSMUST00000039259.7	5633	19	12476	669	12476	-669	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCCTTCCCCTTACGATC	NA	NA	NA	NA	NA	NA	NA	NA	126927251	126928369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_126927318_126927438
ENSMUSG00000025423.17_77153054_77185265_1	chr18	+	383	2	ISM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	150	56231	150	-49368	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTTGGTTCTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	77153053	77185265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_77153116_77184944
ENSMUSG00000025423.17_77223535_77240409_1	chr18	+	390	4	ISM	ENSMUSG00000025423.17	ENSMUST00000168882.9	2254	14	70020	404	70020	-404	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATCCAGCAGCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	77223534	77240409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_77223648_77232698_77232839_77237756_77237795_77240310
ENSMUSG00000025423.17_77223597_77240466_1	chr18	+	385	4	ISM	ENSMUSG00000025423.17	ENSMUST00000168882.9	2254	14	70082	347	70082	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACATCATCTCTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	77223596	77240466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_77223648_77232698_77232839_77237756_77237795_77240310
ENSMUSG00000025423.17_77232791_77240612_1	chr18	+	388	3	ISM	ENSMUSG00000025423.17	ENSMUST00000168882.9	2254	14	79276	201	79276	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATGAACATCGATGACT	NA	NA	NA	NA	NA	NA	NA	NA	77232790	77240612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_77232839_77237756_77237795_77240310
ENSMUSG00000025428.16_77861429_77870566_1	chr18	+	2468	12	FSM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	0	3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCTTGGTTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	77861428	77870566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ENSMUSG00000025428.16_77861429_77870566_2	chr18	+	2461	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCTTGGTTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	77861428	77870566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868918_77869057_77869498_77869650_77870000
ENSMUSG00000025428.16_77861429_77870569_1	chr18	+	2466	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGTTGATGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	77861428	77870569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869052_77869498_77869650_77870000
ENSMUSG00000025428.16_77861656_77870569_1	chr18	+	2237	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGTTGATGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	77861655	77870569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868918_77869057_77869498_77869650_77870000
ENSMUSG00000025428.16_77861656_77870569_2	chr18	+	2244	12	FSM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	227	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGTTGATGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	77861655	77870569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ENSMUSG00000025429.10_77882245_77970325_1	chr18	+	2013	15	FSM	ENSMUSG00000025429.10	ENSMUST00000114741.4	2267	15	0	254	0	-254	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACACAGACACACACACA	NA	NA	NA	NA	NA	NA	NA	NA	77882244	77970325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_77882451_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
ENSMUSG00000025429.10_77882245_77970400_1	chr18	+	2088	15	FSM	ENSMUSG00000025429.10	ENSMUST00000114741.4	2267	15	0	179	0	-179	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATATTTGGCTAACATTT	NA	NA	NA	NA	NA	NA	NA	NA	77882244	77970400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_77882451_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
ENSMUSG00000025429.10_77922824_77970579_1	chr18	+	2062	14	ISM	ENSMUSG00000025429.10	ENSMUST00000114741.4	2267	15	40579	0	40579	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGACTAAGTTGTGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	77922823	77970579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
ENSMUSG00000025436.13_126723118_126737070_1	chr10	-	896	6	FSM	ENSMUSG00000025436.13	ENSMUST00000168520.3	1043	6	147	0	147	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTATTTTTTGGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	126737070	126723117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_126723564_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
ENSMUSG00000025437.16_152065976_152098144_1	chr3	+	2617	20	ISM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	13850	1110	13850	-826	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTAAAATGTTATATAAG	NA	NA	NA	NA	NA	NA	NA	NA	152065975	152098144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ENSMUSG00000025437.16_152074067_152098822_1	chr3	+	2638	15	ISM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	21941	432	21941	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAGTATTCACTGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	152074066	152098822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ENSMUSG00000025437.16_152079056_152099138_1	chr3	+	2559	13	ISM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	26930	116	26930	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCAGTACCTGGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	152079055	152099138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ENSMUSG00000025437.16_152080256_152099254_1	chr3	+	2596	12	ISM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	28130	0	28130	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGATTTTCTAACTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	152080255	152099254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ENSMUSG00000025439.6_97345902_97367684_1	chr7	+	833	5	NNC	ENSMUSG00000025439.6	novel	784	5	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1048	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTCAGCTGCAAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	97345901	97367684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_97346077_97354796_97354933_97363113_97363288_97365657_97365747_97367425
ENSMUSG00000025439.6_97345902_97367684_2	chr7	+	832	5	NNC	ENSMUSG00000025439.6	novel	784	5	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1045	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTCAGCTGCAAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	97345901	97367684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_97346077_97354795_97354933_97363113_97363288_97365659_97365747_97367425
ENSMUSG00000025439.6_97345902_97367684_3	chr7	+	834	5	FSM	ENSMUSG00000025439.6	ENST00000532069.5	784	5	-50	0	-50	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTCAGCTGCAAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	97345901	97367684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_97346077_97354795_97354933_97363113_97363288_97365657_97365747_97367425
ENSMUSG00000025439.6_97345902_97368086_1	chr7	+	1438	7	NNC	ENSMUSG00000025439.6	novel	1504	7	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGCTGTGATTTTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	97345901	97368086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_97346077_97354795_97354933_97360906_97361006_97361838_97361942_97363113_97363288_97365657_97365747_97367425
ENSMUSG00000025439.6_97345902_97368086_2	chr7	+	1443	7	FSM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	61	0	-50	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGCTGTGATTTTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	97345901	97368086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
ENSMUSG00000025439.6_97345902_97368086_3	chr7	+	1437	7	NNC	ENSMUSG00000025439.6	novel	1504	7	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGCTGTGATTTTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	97345901	97368086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363119_97363288_97365657_97365747_97367425
ENSMUSG00000025451.16_119565458_119594268_1	chr13	+	2065	11	FSM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	0	486	0	341	multi-exon	FALSE	canonical	NA	NA	NA	NA	2870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACTCAAGATTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	119565457	119594268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUSG00000025451.16_119565458_119594299_1	chr13	+	2096	11	FSM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	0	455	0	372	multi-exon	FALSE	canonical	NA	NA	NA	NA	2892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCGACTAACTTCATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	119565457	119594299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUSG00000025451.16_119565655_119593927_1	chr13	+	1427	10	NIC	ENSMUSG00000025451.16	novel	1233	10	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTAGCTGGTTAGATG	NA	NA	NA	NA	NA	NA	NA	NA	119565654	119593927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582278_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119593523
ENSMUSG00000025451.16_119565655_119594359_1	chr13	+	1959	11	FSM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	197	395	-14	-385	multi-exon	FALSE	canonical	NA	NA	NA	NA	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTTTATTTCATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	119565654	119594359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUSG00000025451.16_119566740_119594497_1	chr13	+	2011	10	ISM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	1282	257	42	-247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTTGGCCCTATTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	119566739	119594497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUSG00000025451.16_119566780_119587305_1	chr13	+	798	7	NIC	ENSMUSG00000025451.16	novel	1524	10	NA	NA	82	-6436	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACAGAGAAGCTACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	119566779	119587305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr13_+_119566866_119574504_119574691_119577294_119577408_119582278_119582385_119584250_119584377_119586439_119586547_119587231
ENSMUSG00000025451.16_119574534_119593555_1	chr13	+	912	9	ISM	ENSMUSG00000025451.16	ENST00000338972.8	1476	10	7836	367	7836	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAATTGAAGAAGCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	119574533	119593555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_119574691_119577294_119577412_119582278_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUSG00000025451.16_119574592_119594754_1	chr13	+	2055	9	ISM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	9134	0	7894	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATCTTAAAGAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	119574591	119594754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUSG00000025451.16_119574653_119593561_1	chr13	+	799	9	ISM	ENSMUSG00000025451.16	ENST00000338972.8	1476	10	7955	361	7955	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAGAAGCTTATGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	119574652	119593561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_119574691_119577294_119577412_119582278_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUSG00000025451.16_119577293_119593619_1	chr13	+	819	8	NNC	ENSMUSG00000025451.16	novel	1476	10	NA	NA	10595	-122	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTTGAGGATACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	119577292	119593619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_119577412_119582278_119582385_119584250_119584377_119586439_119586547_119587233_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUSG00000025451.16_119577403_119593619_1	chr13	+	709	8	NNC	ENSMUSG00000025451.16	novel	1476	10	NA	NA	10705	-122	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTTGAGGATACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	119577402	119593619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_119577412_119582278_119582385_119584250_119584377_119586439_119586547_119587233_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUSG00000025451.16_119577403_119593741_1	chr13	+	833	8	ISM	ENSMUSG00000025451.16	ENST00000338972.8	1476	10	10705	181	10705	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTGAGTTATGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	119577402	119593741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_119577412_119582278_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUSG00000025451.16_119584249_119593927_1	chr13	+	906	6	ISM	ENSMUSG00000025451.16	ENST00000338972.8	1476	10	17551	-5	17551	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTAGCTGGTTAGATG	NA	NA	NA	NA	NA	NA	NA	NA	119584248	119593927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUSG00000025453.19_119472064_119523203_1	chr13	-	2550	12	ISM	ENSMUSG00000116207.2	ENSMUST00000223268.2	3339	17	22285	0	22285	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCTTCGTCTCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	119523203	119472063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194_119491277_119494038_119494199_119502862_119503043_119505011_119505173_119506447_119506682_119508931_119509128_119511164_119511311_119518211_119518400_119523114
ENSMUSG00000025453.19_119472259_119531184_1	chr13	-	2481	14	ISM	ENSMUSG00000116207.2	ENSMUST00000223268.2	3339	17	14304	195	14304	-195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCACTTCTATTTTAATAT	NA	NA	NA	NA	NA	NA	NA	NA	119531184	119472258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194_119491277_119494038_119494199_119502862_119503043_119505011_119505173_119506447_119506682_119508931_119509128_119511164_119511311_119518211_119518400_119523114_119523204_119525729_119525818_119531146
ENSMUSG00000025453.19_119472327_119531260_1	chr13	-	2489	14	ISM	ENSMUSG00000116207.2	ENSMUST00000223268.2	3339	17	14228	263	14228	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATCATGCCAAATCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	119531260	119472326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194_119491277_119494038_119494199_119502862_119503043_119505011_119505173_119506447_119506682_119508931_119509128_119511164_119511311_119518211_119518400_119523114_119523204_119525729_119525818_119531146
ENSMUSG00000025453.19_119472484_119533354_1	chr13	-	2508	15	ISM	ENSMUSG00000116207.2	ENSMUST00000223268.2	3339	17	12134	420	12134	-420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGATATGGGTTGGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	119533354	119472483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194_119491277_119494038_119494199_119502862_119503043_119505011_119505173_119506447_119506682_119508931_119509128_119511164_119511311_119518211_119518400_119523114_119523204_119525729_119525818_119531146_119531365_119533282
ENSMUSG00000025453.19_119472566_119533407_1	chr13	-	2479	15	ISM	ENSMUSG00000116207.2	ENSMUST00000223268.2	3339	17	12081	502	12081	-502	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAGATGCAACCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	119533407	119472565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194_119491277_119494038_119494199_119502862_119503043_119505011_119505173_119506447_119506682_119508931_119509128_119511164_119511311_119518211_119518400_119523114_119523204_119525729_119525818_119531146_119531365_119533282
ENSMUSG00000025453.19_119472620_119533475_1	chr13	-	2493	15	ISM	ENSMUSG00000116207.2	ENSMUST00000223268.2	3339	17	12013	556	12013	-556	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGCCATTGCCCAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	119533475	119472619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194_119491277_119494038_119494199_119502862_119503043_119505011_119505173_119506447_119506682_119508931_119509128_119511164_119511311_119518211_119518400_119523114_119523204_119525729_119525818_119531146_119531365_119533282
ENSMUSG00000025453.19_119472731_119541152_1	chr13	-	2484	16	ISM	ENSMUSG00000116207.2	ENSMUST00000223268.2	3339	17	4336	667	4336	-667	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAGCTCTCAAGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	119541152	119472730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194_119491277_119494038_119494199_119502862_119503043_119505011_119505173_119506447_119506682_119508931_119509128_119511164_119511311_119518211_119518400_119523114_119523204_119525729_119525818_119531146_119531365_119533282_119533513_119541087
ENSMUSG00000025453.19_119472789_119541206_1	chr13	-	2480	16	ISM	ENSMUSG00000116207.2	ENSMUST00000223268.2	3339	17	4282	725	4282	-725	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGATCCAGCCGATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	119541206	119472788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194_119491277_119494038_119494199_119502862_119503043_119505011_119505173_119506447_119506682_119508931_119509128_119511164_119511311_119518211_119518400_119523114_119523204_119525729_119525818_119531146_119531365_119533282_119533513_119541087
ENSMUSG00000025464.16_139705621_139711672_1	chr7	+	978	4	FSM	ENSMUSG00000025464.16	ENST00000480071.2	942	4	-36	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCCACCTCCACTATAT	NA	NA	NA	NA	NA	NA	NA	NA	139705620	139711672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_139705796_139706238_139706729_139707420_139707621_139711559
ENSMUSG00000025465.14_139685623_139690019_1	chr7	-	856	3	ISM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	6370	0	6370	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTTTTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	139690019	139685622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139686291_139687996_139688065_139689899
ENSMUSG00000025465.14_139685736_139690519_1	chr7	-	811	4	ISM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	5870	113	5870	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGCCTGGAAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	139690519	139685735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451
ENSMUSG00000025465.14_139685932_139692459_1	chr7	-	880	6	ISM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	3930	309	3930	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCGCAGCTCATAGCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	139692459	139685931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331
ENSMUSG00000025465.14_139686132_139693046_1	chr7	-	878	7	ISM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	3343	509	3343	-509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCCACCGAAGGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	139693046	139686131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848
ENSMUSG00000025465.14_139686249_139696302_1	chr7	-	844	8	FSM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	87	626	87	-626	multi-exon	FALSE	canonical	NA	NA	NA	NA	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGCCAACTTCAAAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	139696302	139686248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
ENSMUSG00000025470.12_139616325_139620188_1	chr7	+	749	6	FSM	ENSMUSG00000025470.12	ENSMUST00000168194.3	1076	6	0	327	0	-327	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAGAGGGTTTAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	139616324	139620188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139620155
ENSMUSG00000025470.12_139616325_139620228_1	chr7	+	789	6	FSM	ENSMUSG00000025470.12	ENSMUST00000168194.3	1076	6	0	287	0	-287	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGATGGATCCTGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	139616324	139620228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139620155
ENSMUSG00000025470.12_139616441_139620311_1	chr7	+	756	6	FSM	ENSMUSG00000025470.12	ENSMUST00000168194.3	1076	6	116	204	116	-204	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGCTGGACCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	139616440	139620311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139620155
ENSMUSG00000025470.12_139617129_139620515_1	chr7	+	811	4	ISM	ENSMUSG00000025470.12	ENSMUST00000168194.3	1076	6	804	0	804	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCTGTTCTTCTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	139617128	139620515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_139617335_139617428_139617554_139619238_139619359_139620155
ENSMUSG00000025474.10_139575961_139581480_1	chr7	-	819	6	ISM	ENSMUSG00000025474.10	ENST00000683060.1	2594	16	32219	-2	32219	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCCTGCGCAATGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	139581480	139575960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139581338
ENSMUSG00000025474.10_139575961_139586020_1	chr7	-	1434	10	ISM	ENSMUSG00000025474.10	ENST00000682905.1	2750	17	27679	-2	27679	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCCTGCGCAATGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	139586020	139575960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927
ENSMUSG00000025474.10_139576695_139584789_1	chr7	-	809	6	ISM	ENSMUSG00000025474.10	ENST00000683060.1	2594	16	28910	732	28910	-732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAACACTTCCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	139584789	139576694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139581338_139581512_139584711
ENSMUSG00000025474.10_139576755_139584831_1	chr7	-	791	6	ISM	ENSMUSG00000025474.10	ENST00000683060.1	2594	16	28868	792	28868	-792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGACTAAGTGTCTACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	139584831	139576754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139581338_139581512_139584711
ENSMUSG00000025474.10_139576784_139581446_1	chr7	-	706	6	ISM	ENSMUSG00000025474.10	ENST00000682905.1	2750	17	32253	821	32253	-821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGCCCATCTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	139581446	139576783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338
ENSMUSG00000025474.10_139576801_139586871_1	chr7	-	1369	10	ISM	ENSMUSG00000025474.10	ENST00000682905.1	2750	17	26828	838	26828	-838	internal_fragment	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACTTTGACAAAAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	139586871	139576800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764
ENSMUSG00000025474.10_139577885_139584748_1	chr7	-	700	6	ISM	ENSMUSG00000025474.10	ENST00000683014.1	2690	17	28951	1922	28951	-1922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGGCCATGGGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	139584748	139577884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581479_139584711
ENSMUSG00000025474.10_139577885_139585226_1	chr7	-	792	6	ISM	ENSMUSG00000025474.10	ENST00000683060.1	2594	16	28473	1922	28473	-1922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGGCCATGGGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	139585226	139577884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139578014_139578681_139578826_139579139_139579261_139581338_139581512_139584711_139584893_139585182
ENSMUSG00000025474.10_139577937_139584798_1	chr7	-	698	6	ISM	ENSMUSG00000025474.10	ENST00000683014.1	2690	17	28901	1974	28901	-1974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAGACTGAACGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	139584798	139577936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581479_139584711
ENSMUSG00000025474.10_139577950_139585269_1	chr7	-	770	6	ISM	ENSMUSG00000025474.10	ENST00000683060.1	2594	16	28430	1987	28430	-1987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGGGCCACCCACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	139585269	139577949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139578014_139578681_139578826_139579139_139579261_139581338_139581512_139584711_139584893_139585182
ENSMUSG00000025474.10_139577960_139587400_1	chr7	-	1380	10	ISM	ENSMUSG00000025474.10	ENST00000682905.1	2750	17	26299	1997	26299	-1997	internal_fragment	FALSE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTAGTGTGCAGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	139587400	139577959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339
ENSMUSG00000025474.10_139577985_139584856_1	chr7	-	708	6	ISM	ENSMUSG00000025474.10	ENST00000683014.1	2690	17	28843	2022	28843	-2022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTAGGCCGTCTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	139584856	139577984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581479_139584711
ENSMUSG00000025474.10_139578708_139585196_1	chr7	-	703	6	ISM	ENSMUSG00000025474.10	ENST00000683014.1	2690	17	28503	2745	28503	-2745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCATGTTTACCAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	139585196	139578707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139578826_139579139_139579261_139580927_139581057_139581338_139581479_139584711_139584893_139585182
ENSMUSG00000025474.10_139578751_139586004_1	chr7	-	808	6	ISM	ENSMUSG00000025474.10	ENST00000683060.1	2594	16	27695	2788	27695	-2788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGAGCTGCTGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	139586004	139578750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139578826_139579139_139579261_139581338_139581512_139584711_139584893_139585182_139585364_139585927
ENSMUSG00000025474.10_139578760_139585248_1	chr7	-	703	6	ISM	ENSMUSG00000025474.10	ENST00000683014.1	2690	17	28451	2797	28451	-2797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGACCAACCCTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	139585248	139578759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139578826_139579139_139579261_139580927_139581057_139581338_139581479_139584711_139584893_139585182
ENSMUSG00000025474.10_139578802_139585307_1	chr7	-	720	6	ISM	ENSMUSG00000025474.10	ENST00000683014.1	2690	17	28392	2839	28392	-2839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCACCACACAAGCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	139585307	139578801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139578826_139579139_139579261_139580927_139581057_139581338_139581479_139584711_139584893_139585182
ENSMUSG00000025474.10_139579243_139585983_1	chr7	-	705	6	ISM	ENSMUSG00000025474.10	ENST00000683014.1	2690	17	27716	3280	27716	-3280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCGGCAGCGAATGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	139585983	139579242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139579261_139580927_139581057_139581338_139581479_139584711_139584893_139585182_139585364_139585927
ENSMUSG00000025474.10_139581017_139609805_1	chr7	-	1385	9	ISM	ENSMUSG00000025474.10	ENST00000682905.1	2750	17	3894	5054	3894	-5054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	926	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACTGCAAGCACGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	139609805	139581016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739
ENSMUSG00000025474.10_139581024_139586792_1	chr7	-	709	6	ISM	ENSMUSG00000025474.10	ENST00000683014.1	2690	17	26907	5061	26907	-5061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATGTTCTACTGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	139586792	139581023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139581057_139581338_139581479_139584711_139584893_139585182_139585364_139585927_139586074_139586764
ENSMUSG00000025474.10_139581427_139586894_1	chr7	-	690	5	ISM	ENSMUSG00000025474.10	ENST00000683014.1	2690	17	26805	5464	26805	-5464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCCCACGGAGCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	139586894	139581426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139581479_139584711_139584893_139585182_139585364_139585927_139586074_139586764
ENSMUSG00000025474.10_139581464_139610974_1	chr7	-	1365	9	ISM	ENSMUSG00000025474.10	ENST00000682905.1	2750	17	2725	5501	2725	-5501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	836	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATCGAGACCAAGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	139610974	139581463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923
ENSMUSG00000025474.10_139584712_139611100_1	chr7	-	1443	8	ISM	ENSMUSG00000025474.10	ENST00000682905.1	2750	17	2599	8749	2599	-8749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAGTGTTTACCATCA	NA	NA	NA	NA	NA	NA	NA	NA	139611100	139584711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923
ENSMUSG00000025474.10_139585286_139613690_1	chr7	-	1453	9	ISM	ENSMUSG00000025474.10	ENST00000683014.1	2690	17	9	9323	9	-9323	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCGGGCATATGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	139613690	139585285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525
ENSMUSG00000025474.10_139585336_139613690_1	chr7	-	1403	9	ISM	ENSMUSG00000025474.10	ENST00000683014.1	2690	17	9	9373	9	-9373	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCATGATGTCACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	139613690	139585335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525
ENSMUSG00000025474.10_139585927_139613534_1	chr7	-	1247	8	ISM	ENSMUSG00000025474.10	ENST00000682905.1	2750	17	165	9964	165	-9964	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCTGCCTGGACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	139613534	139585926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613498
ENSMUSG00000025474.10_139585982_139613582_1	chr7	-	1240	8	ISM	ENSMUSG00000025474.10	ENST00000682905.1	2750	17	117	10019	117	-10019	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGCAGATCCCATCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	139613582	139585981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613498
ENSMUSG00000025474.10_139585992_139609848_1	chr7	-	789	5	ISM	ENSMUSG00000025474.10	ENST00000682905.1	2750	17	3851	10029	3851	-10029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGCTGCCGCAGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	139609848	139585991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739
ENSMUSG00000025474.10_139586032_139616175_1	chr7	-	1459	9	ISM	ENSMUSG00000025474.10	ENSMUST00000026547.9	2960	18	4	10123	4	-10069	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGAGGACTACAACGACA	NA	NA	NA	NA	NA	NA	NA	NA	139616175	139586031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
ENSMUSG00000025474.10_139586042_139613690_1	chr7	-	1288	8	ISM	ENSMUSG00000025474.10	ENST00000682905.1	2750	17	9	10079	9	-10079	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGAAGATCCAGGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	139613690	139586041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613498
ENSMUSG00000025474.10_139587847_139613690_1	chr7	-	792	5	ISM	ENSMUSG00000025474.10	ENST00000683014.1	2690	17	9	11884	9	-11884	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACAGAATCCTCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	139613690	139587846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525
ENSMUSG00000025484.10_140433307_140437022_1	chr7	-	2265	4	NNC	ENSMUSG00000025484.10	novel	2268	4	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTCTATGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	140437022	140433306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_140434530_140434673_140434735_140434986_140435079_140436133
ENSMUSG00000025485.14_140436870_140442427_1	chr7	+	2190	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	0	1216	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGCTGGGGAGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	140436869	140442427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ENSMUSG00000025485.14_140437335_140442872_1	chr7	+	2170	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	465	771	-46	445	multi-exon	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCAAGCCTCACTAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	140437334	140442872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ENSMUSG00000025485.14_140437893_140443056_1	chr7	+	2175	8	ISM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	1023	587	512	-587	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	NA	NA	NA	NA	NA	NA	NA	140437892	140443056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ENSMUSG00000025485.14_140438304_140441028_1	chr7	+	582	5	ISM	ENSMUSG00000025485.14	ENST00000325207.9	1697	10	923	1399	923	-1399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACCTGCTTCGAAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	140438303	140441028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440967
ENSMUSG00000025485.14_140438764_140443523_1	chr7	+	2061	7	ISM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	1894	120	1383	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCCACATAACCTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	140438763	140443523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ENSMUSG00000025485.14_140438797_140443643_1	chr7	+	2148	7	ISM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	1927	0	1416	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAACATGCTAGATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	140438796	140443643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ENSMUSG00000025485.14_140438812_140441271_1	chr7	+	529	5	ISM	ENSMUSG00000025485.14	ENST00000325207.9	1697	10	1431	1156	1431	-1156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGCTGGGGGCCGACCC	NA	NA	NA	NA	NA	NA	NA	NA	140438811	140441271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140438868_140439351_140439503_140440789_140440886_140440967_140441131_140441208
ENSMUSG00000025485.14_140439362_140441772_1	chr7	+	565	5	ISM	ENSMUSG00000025485.14	ENST00000325207.9	1697	10	1981	655	1981	-655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGAGGAGAAGCCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	140439361	140441772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140439503_140440789_140440886_140440967_140441131_140441208_140441354_140441752
ENSMUSG00000025485.14_140439441_140441812_1	chr7	+	526	5	ISM	ENSMUSG00000025485.14	ENST00000325207.9	1697	10	2060	615	2060	-615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGGAGCAGAAGGAACATG	NA	NA	NA	NA	NA	NA	NA	NA	140439440	140441812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140439503_140440789_140440886_140440967_140441131_140441208_140441354_140441752
ENSMUSG00000025485.14_140439487_140441869_1	chr7	+	537	5	ISM	ENSMUSG00000025485.14	ENST00000325207.9	1697	10	2106	558	2106	-558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTATGTGTTATGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	140439486	140441869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140439503_140440789_140440886_140440967_140441131_140441208_140441354_140441752
ENSMUSG00000025485.14_140440815_140442303_1	chr7	+	579	5	ISM	ENSMUSG00000025485.14	ENST00000325207.9	1697	10	3434	124	3434	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGACAGCTCTCCTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	140440814	140442303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140440886_140440967_140441131_140441208_140441354_140441752_140441873_140442223
ENSMUSG00000025485.14_140441086_140442427_1	chr7	+	514	4	ISM	ENSMUSG00000025485.14	ENST00000325207.9	1697	10	3705	0	3705	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGCTGGGGAGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	140441085	140442427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140441131_140441208_140441354_140441752_140441873_140442223
ENSMUSG00000025486.18_140443898_140457798_1	chr7	-	867	5	FSM	ENSMUSG00000025486.18	ENST00000524564.5	866	5	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACACGTTTACAAACATG	NA	NA	NA	NA	NA	NA	NA	NA	140457798	140443897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_140443997_140444828_140445098_140449401_140449564_140456266_140456368_140457562
ENSMUSG00000025486.18_140443898_140457798_2	chr7	-	861	5	NNC	ENSMUSG00000025486.18	novel	866	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACACGTTTACAAACATG	NA	NA	NA	NA	NA	NA	NA	NA	140457798	140443897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_140443997_140444828_140445092_140449401_140449564_140456266_140456368_140457562
ENSMUSG00000025486.18_140443963_140457610_1	chr7	-	393	4	ISM	ENSMUSG00000025486.18	ENST00000532956.5	834	5	450	65	187	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTGGGGAAGTCACACA	NA	NA	NA	NA	NA	NA	NA	NA	140457610	140443962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_140443997_140444887_140445098_140456266_140456368_140457562
ENSMUSG00000025486.18_140443980_140457703_1	chr7	-	469	4	ISM	ENSMUSG00000025486.18	ENST00000532956.5	834	5	357	82	94	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGACTATGGCTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	140457703	140443979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_140443997_140444887_140445098_140456266_140456368_140457562
ENSMUSG00000025486.18_140444933_140457738_1	chr7	-	442	3	ISM	ENSMUSG00000025486.18	ENST00000532956.5	834	5	322	1035	59	-1035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACACAAGAACTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	140457738	140444932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_140445098_140456266_140456368_140457562
ENSMUSG00000025486.18_140445055_140457883_1	chr7	-	391	4	ISM	ENSMUSG00000025486.18	ENST00000532956.5	834	5	177	1157	-86	-1157	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCCGACTGCTCATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	140457883	140445054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_140445098_140456266_140456368_140457562_140457796_140457869
ENSMUSG00000025486.18_140456347_140458060_1	chr7	-	445	3	ISM	ENSMUSG00000025486.18	ENST00000532956.5	834	5	0	12449	0	-12449	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGTTGAAGCCCACGGG	NA	NA	NA	NA	NA	NA	NA	NA	140458060	140456346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_140456368_140457562_140457796_140457869
ENSMUSG00000025487.16_140461881_140478207_1	chr7	+	1641	13	FSM	ENSMUSG00000025487.16	ENSMUST00000026560.14	1989	13	0	348	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCCTGCAGACCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	140461880	140478207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
ENSMUSG00000025487.16_140461881_140478207_2	chr7	+	1644	12	NNC	ENSMUSG00000025487.16	novel	1989	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCCTGCAGACCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	140461880	140478207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_140462480_140463412_140463492_140466385_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
ENSMUSG00000025487.16_140462140_140478308_2	chr7	+	1483	13	FSM	ENSMUSG00000025487.16	ENSMUST00000026560.14	1989	13	259	247	-237	101	multi-exon	FALSE	canonical	NA	NA	NA	NA	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGAGTGGGAACTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	140462139	140478308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
ENSMUSG00000025487.16_140462327_140478555_2	chr7	+	1543	13	FSM	ENSMUSG00000025487.16	ENSMUST00000026560.14	1989	13	446	0	-50	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	140462326	140478555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
ENSMUSG00000025487.16_140466301_140478207_1	chr7	+	1051	10	FSM	ENSMUSG00000025487.16	ENST00000431206.6	1051	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCCTGCAGACCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	140466300	140478207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
ENSMUSG00000025491.15_140548188_140549500_1	chr7	+	296	2	FSM	ENSMUSG00000025491.15	ENST00000680209.1	538	2	22	220	22	-220	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCATCGTCGTCATCGT	NA	NA	NA	NA	NA	NA	NA	NA	140548187	140549500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_140548352_140549368
ENSMUSG00000025491.15_140548309_140549738_1	chr7	+	380	2	FSM	ENSMUSG00000025491.15	ENSMUST00000026564.9	736	2	356	0	143	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTCCTGTGTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	140548308	140549738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_140548352_140549401
ENSMUSG00000025491.15_140548309_140549738_3	chr7	+	380	2	FSM	ENSMUSG00000025491.15	ENST00000681198.1	505	2	143	-18	143	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTCCTGTGTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	140548308	140549738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_140548357_140549406
ENSMUSG00000025492.7_140589499_140590386_1	chr7	-	381	2	FSM	ENSMUSG00000025492.7	ENSMUST00000026565.7	678	2	297	0	297	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTGCTTTTATTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	140590386	140589498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_140589803_140590309
ENSMUSG00000025492.7_140589499_140590386_2	chr7	-	376	2	NNC	ENSMUSG00000025492.7	novel	678	2	NA	NA	297	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTGCTTTTATTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	140590386	140589498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_140589798_140590309
ENSMUSG00000025492.7_140589499_140590509_1	chr7	-	504	2	FSM	ENSMUSG00000025492.7	ENSMUST00000026565.7	678	2	174	0	174	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTGCTTTTATTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	140590509	140589498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_140589803_140590309
ENSMUSG00000025492.7_140589675_140590683_1	chr7	-	502	2	FSM	ENSMUSG00000025492.7	ENSMUST00000026565.7	678	2	0	176	0	-176	multi-exon	FALSE	canonical	NA	NA	NA	NA	2622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATTGTTCTTAACGCTC	NA	NA	NA	NA	NA	NA	NA	NA	140590683	140589674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_140589803_140590309
ENSMUSG00000025495.16_140723010_140734563_1	chr7	+	775	8	ISM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	11811	2956	11811	-2956	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACGTGGGTGGTGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	140723009	140734563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469
ENSMUSG00000025495.16_140731556_140734784_1	chr7	+	748	7	ISM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	20357	2735	20357	-2735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCATCGTGGTGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	140731555	140734784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723
ENSMUSG00000025495.16_140731589_140734858_1	chr7	+	789	7	ISM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	20390	2661	20390	-2661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTCCATCCTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	140731588	140734858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723
ENSMUSG00000025495.16_140732728_140735357_1	chr7	+	751	6	ISM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	21529	2162	21529	-2162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGGAACTGCAGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	140732727	140735357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ENSMUSG00000025495.16_140734536_140735771_1	chr7	+	791	3	ISM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	23337	1748	23337	-1748	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGCAGAAGCCCCATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	140734535	140735771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140734616_140734723_140734910_140735246
ENSMUSG00000025495.16_140734845_140735940_1	chr7	+	759	2	ISM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	23646	1579	23646	-1579	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGACAGTCACAGATTGGC	NA	NA	NA	NA	NA	NA	NA	NA	140734844	140735940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140734910_140735246
ENSMUSG00000025503.6_140972156_140981538_1	chr7	+	485	5	ISM	ENSMUSG00000025503.6	ENSMUST00000026576.5	1229	8	44	1343	44	-1341	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTTCGCCCAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	140972155	140981538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140972232_140975961_140976086_140978407_140978516_140980200_140980333_140981493
ENSMUSG00000025503.6_140978448_140981857_1	chr7	+	449	4	ISM	ENSMUSG00000025503.6	ENSMUST00000211654.2	1362	9	6336	1022	6336	-1022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCGCAACACGGGCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	140978447	140981857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140978516_140980200_140980333_140981493_140981670_140981784
ENSMUSG00000025503.6_140978493_140981915_1	chr7	+	462	4	ISM	ENSMUSG00000025503.6	ENSMUST00000211654.2	1362	9	6381	964	6381	-964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAAGCTCCTGGGGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	140978492	140981915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140978516_140980200_140980333_140981493_140981670_140981784
ENSMUSG00000025503.6_140981494_140982140_1	chr7	+	418	3	ISM	ENSMUSG00000025503.6	ENSMUST00000211654.2	1362	9	9382	739	9382	-739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGTTGGCTGCACAACGA	NA	NA	NA	NA	NA	NA	NA	NA	140981493	140982140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140981670_140981784_140981983_140982096
ENSMUSG00000025503.6_140981494_140982242_1	chr7	+	520	3	ISM	ENSMUSG00000025503.6	ENSMUST00000211654.2	1362	9	9382	637	9382	-637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTCCTGAGTGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	140981493	140982242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140981670_140981784_140981983_140982096
ENSMUSG00000025503.6_140981595_140982710_1	chr7	+	473	4	ISM	ENSMUSG00000025503.6	ENSMUST00000211654.2	1362	9	9483	169	9483	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCACCGAGGCTGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	140981594	140982710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140981670_140981784_140981983_140982096_140982243_140982656
ENSMUSG00000025503.6_140981626_140982703_1	chr7	+	435	4	ISM	ENSMUSG00000025503.6	ENSMUST00000211654.2	1362	9	9514	176	9514	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGTCCTGCACCGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	140981625	140982703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140981670_140981784_140981983_140982096_140982243_140982656
ENSMUSG00000025503.6_140981881_140982881_1	chr7	+	473	3	ISM	ENSMUSG00000025503.6	ENSMUST00000026576.5	1229	8	9769	0	9769	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCATTTCACCGTC	NA	NA	NA	NA	NA	NA	NA	NA	140981880	140982881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140981983_140982096_140982243_140982656
ENSMUSG00000025505.17_140908073_140916742_1	chr7	+	1443	6	FSM	ENSMUSG00000025505.17	ENSMUST00000026578.14	1800	6	30	327	30	16	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATACAGAGAGCTGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	140908072	140916742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_140908180_140911330_140911475_140912822_140912843_140913550_140913645_140913923_140914017_140915757
ENSMUSG00000025505.17_140908073_140916742_2	chr7	+	1427	5	NNC	ENSMUSG00000025505.17	novel	1800	6	NA	NA	30	16	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATACAGAGAGCTGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	140908072	140916742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_140908180_140911330_140911479_140913550_140913645_140913923_140914017_140915757
ENSMUSG00000025505.17_140913940_140917069_1	chr7	+	1389	2	ISM	ENSMUSG00000025505.17	ENSMUST00000132061.2	667	3	646	-1089	646	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTGTCTTCATTATAA	NA	NA	NA	NA	NA	NA	NA	NA	140913939	140917069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140914017_140915757
ENSMUSG00000025508.14_141027283_141028687_1	chr7	+	511	3	ISM	ENSMUSG00000025508.14	ENSMUST00000084434.11	964	5	0	2811	0	-2576	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTCCTGGGAAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	141027282	141028687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141027621_141027820_141027945_141028638
ENSMUSG00000025508.14_141027544_141031263_1	chr7	+	468	5	FSM	ENSMUSG00000025508.14	ENSMUST00000084434.11	964	5	261	235	-81	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	141027543	141031263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031144
ENSMUSG00000025508.14_141028637_141031499_1	chr7	+	505	3	ISM	ENSMUSG00000025508.14	ENSMUST00000106003.2	449	4	874	-236	874	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCACTGCTCTGCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	141028636	141031499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141028688_141030916_141031016_141031144
ENSMUSG00000025508.14_141030916_141031499_1	chr7	+	452	2	NNC	ENSMUSG00000025508.14	novel	449	4	NA	NA	3153	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCACTGCTCTGCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	141030915	141031499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_141031016_141031147
ENSMUSG00000025509.16_141035351_141038672_1	chr7	+	774	6	ISM	ENSMUSG00000025509.16	ENSMUST00000164016.8	2625	9	240	1984	231	-1335	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGCCGCCACGGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	141035350	141038672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141035387_141037185_141037419_141037504_141037571_141037917_141038128_141038342_141038404_141038504
ENSMUSG00000025509.16_141037336_141039139_1	chr7	+	781	7	ISM	ENSMUSG00000025509.16	ENSMUST00000164016.8	2625	9	2225	1517	2216	-868	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATCTGCCAGTATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	141037335	141039139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141037419_141037504_141037571_141037917_141038128_141038342_141038404_141038504_141038673_141038757_141038891_141039079
ENSMUSG00000025509.16_141038039_141039522_1	chr7	+	795	6	ISM	ENSMUSG00000025509.16	ENSMUST00000164016.8	2625	9	2928	1134	2919	-485	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACTGCCGCAGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	141038038	141039522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141038128_141038342_141038404_141038504_141038673_141038757_141038891_141039079_141039203_141039301
ENSMUSG00000025509.16_141038606_141039767_1	chr7	+	789	4	ISM	ENSMUSG00000025509.16	ENSMUST00000164016.8	2625	9	3495	889	3486	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTATGCTACTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	141038605	141039767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141038673_141038757_141038891_141039079_141039203_141039301
ENSMUSG00000025510.15_141047351_141050957_1	chr7	+	1273	8	FSM	ENSMUSG00000025510.15	ENSMUST00000177840.9	1708	8	16	419	16	345	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTATGCAGACTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	141047350	141050957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_141047380_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ENSMUSG00000025510.15_141047446_141051386_1	chr7	+	1725	8	FSM	ENSMUSG00000025510.15	ENSMUST00000106000.10	1865	8	140	0	111	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCGAATCAGCTTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	141047445	141051386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_141047498_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ENSMUSG00000025510.15_141049166_141050613_1	chr7	+	768	6	FSM	ENSMUSG00000025510.15	ENST00000528011.2	764	6	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGATGTCAGGCCGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	141049165	141050613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050376_141050463
ENSMUSG00000025511.16_141055153_141073340_1	chr7	+	1458	8	NNC	ENSMUSG00000025511.16	novel	1466	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGAAGTTCTTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	141055152	141073340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_141055411_141062399_141062480_141069464_141069657_141070674_141070750_141071492_141071587_141071686_141071819_141071892_141071977_141072797
ENSMUSG00000025511.16_141055153_141073340_2	chr7	+	1458	8	NNC	ENSMUSG00000025511.16	novel	1466	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGAAGTTCTTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	141055152	141073340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_141055411_141062407_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
ENSMUSG00000025511.16_141055153_141073340_3	chr7	+	1460	8	NNC	ENSMUSG00000025511.16	novel	1466	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGAAGTTCTTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	141055152	141073340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_141055411_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071971_141072797
ENSMUSG00000025511.16_141056313_141070749_1	chr7	+	426	4	ISM	ENSMUSG00000025511.16	ENSMUST00000117634.2	1281	8	0	2585	0	-2117	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTGCTGCAAATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	141056312	141070749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141056392_141062399_141062480_141069464_141069657_141070674
ENSMUSG00000025511.16_141069591_141071939_1	chr7	+	320	4	ISM	ENSMUSG00000025511.16	ENST00000346501.8	677	6	7193	970	7193	-927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGCATCTTTGGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	141069590	141071939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141069657_141070674_141070750_141071686_141071819_141071892
ENSMUSG00000025512.16_141075658_141095400_1	chr7	-	768	5	ISM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	24329	2609	24317	-2607	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCCTTCTCAGCATCAC	NA	NA	NA	NA	NA	NA	NA	NA	141095400	141075657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314
ENSMUSG00000025512.16_141093702_141110132_1	chr7	-	713	8	ISM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	9597	20653	9585	-20651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCATGGATTATGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	141110132	141093701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062
ENSMUSG00000025521.16_65399906_65416984_1	chr8	+	627	4	ISM	ENSMUSG00000025521.16	ENSMUST00000209852.2	1193	6	35	2388	0	-2388	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAACGGAAGCCGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	65399905	65416984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849
ENSMUSG00000025521.16_65409164_65421424_1	chr8	+	586	5	ISM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	9327	261	9258	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACAATGCTCTGCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	65409163	65421424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_65409185_65411996_65412262_65416849_65416985_65418190_65418294_65421362
ENSMUSG00000025521.16_65412195_65421685_1	chr8	+	628	4	ISM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	12358	0	12289	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTTTGTATGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	65412194	65421685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_65412262_65416849_65416985_65418190_65418294_65421362
ENSMUSG00000025521.16_65416849_65421685_1	chr8	+	562	3	ISM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	17012	0	16943	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTTTGTATGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	65416848	65421685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_65416985_65418190_65418294_65421362
ENSMUSG00000025525.13_111221063_111274212_1	chrX	+	710	8	ISM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	32	8240	0	250	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGCCAAAAGAACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	111221062	111274212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158
ENSMUSG00000025525.13_111243560_111281950_1	chrX	+	692	8	ISM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	22529	502	62	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGATATGTACAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	111243559	111281950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
ENSMUSG00000025525.13_111255932_111259552_1	chrX	+	176	2	ISM	ENSMUSG00000025525.13	ENST00000511152.1	578	6	12434	14410	12434	-14410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTGAGTAATCCGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	111255931	111259552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_111256055_111259499
ENSMUSG00000025525.13_111259498_111282127_1	chrX	+	706	6	ISM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	38467	325	16000	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGTGGTAAAATCATAA	NA	NA	NA	NA	NA	NA	NA	NA	111259497	111282127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
ENSMUSG00000025525.13_111263884_111282291_1	chrX	+	690	4	ISM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	42853	161	20386	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCATATGTATGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	111263883	111282291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_111263950_111273853_111273968_111274158_111274268_111281890
ENSMUSG00000025532.14_130058131_130088621_1	chr5	+	483	6	FSM	ENSMUSG00000025532.14	ENSMUST00000026608.11	1492	6	0	1009	0	-291	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGGTCCAGAGGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	130058130	130088621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088545
ENSMUSG00000025532.14_130063753_130088773_1	chr5	+	517	5	ISM	ENSMUSG00000025532.14	ENSMUST00000026608.11	1492	6	5622	857	5601	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGACCCCCTCTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	130063752	130088773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088545
ENSMUSG00000025532.14_130071045_130088912_1	chr5	+	522	3	ISM	ENSMUSG00000025532.14	ENSMUST00000026608.11	1492	6	12914	718	12893	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGGGTAGAAAGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	130071044	130088912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130071142_130077766_130077825_130088545
ENSMUSG00000025533.16_130040099_130042356_1	chr5	-	975	7	ISM	ENSMUSG00000025533.16	ENST00000673518.1	1388	15	10573	-262	10573	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGAGAGATGTGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	130042356	130040098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241
ENSMUSG00000025533.16_130040099_130042866_1	chr5	-	1038	8	ISM	ENSMUSG00000025533.16	ENST00000673518.1	1388	15	10063	-262	10063	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGAGAGATGTGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	130042866	130040098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803
ENSMUSG00000025533.16_130040213_130044958_1	chr5	-	998	10	ISM	ENSMUSG00000025533.16	ENSMUST00000161094.8	1824	17	8264	114	7971	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTTTTTCCTCCTACACC	NA	NA	NA	NA	NA	NA	NA	NA	130044958	130040212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937
ENSMUSG00000025533.16_130040471_130041581_1	chr5	-	343	4	ISM	ENSMUSG00000025533.16	ENST00000673518.1	1388	15	11348	110	11348	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCACAGCGAAATCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	130041581	130040470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497
ENSMUSG00000025533.16_130040706_130041897_1	chr5	-	332	4	ISM	ENSMUSG00000025533.16	ENST00000673518.1	1388	15	11032	345	11032	-345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCGGACCCCTCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	130041897	130040705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130040813_130040890_130040972_130041497_130041582_130041837
ENSMUSG00000025533.16_130041498_130042356_1	chr5	-	344	4	ISM	ENSMUSG00000025533.16	ENST00000673518.1	1388	15	10573	1137	10573	-1137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGACTAGCCTTCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	130042356	130041497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130041582_130041837_130041898_130042009_130042095_130042241
ENSMUSG00000025533.16_130042010_130053141_1	chr5	-	968	12	ISM	ENSMUSG00000025533.16	ENSMUST00000161094.8	1824	17	81	1911	81	-1649	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCTGGGCAGAGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	130053141	130042009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
ENSMUSG00000025533.16_130042288_130047251_1	chr5	-	364	5	ISM	ENSMUSG00000025533.16	ENST00000673518.1	1388	15	5678	1927	5678	-1927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTACCAAGGAATTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	130047251	130042287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130042357_130042803_130042867_130043519_130043573_130045136_130045215_130047150
ENSMUSG00000025533.16_130042804_130047447_1	chr5	-	351	5	ISM	ENSMUSG00000025533.16	ENST00000673518.1	1388	15	5482	2443	5482	-2443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACCCCCGAGTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	130047447	130042803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130042867_130043519_130043573_130045136_130045215_130047150_130047249_130047388
ENSMUSG00000025533.16_130043520_130047759_1	chr5	-	372	5	ISM	ENSMUSG00000025533.16	ENST00000673518.1	1388	15	5170	3159	5170	-3159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCACCTTGTTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	130047759	130043519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130043573_130045136_130045215_130047150_130047249_130047388_130047446_130047673
ENSMUSG00000025534.18_130017864_130026724_1	chr5	-	1167	5	ISM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	5166	12	4982	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAACTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	130026724	130017863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620
ENSMUSG00000025534.18_130018048_130026944_1	chr5	-	1113	6	ISM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	4946	196	4762	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACTGTTCTACTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	130026944	130018047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857
ENSMUSG00000025534.18_130018225_130027358_1	chr5	-	1136	7	ISM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	4532	373	4348	-373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTACAGTGCCTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	130027358	130018224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250
ENSMUSG00000025534.18_130018300_130027394_1	chr5	-	1097	7	ISM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	4496	448	4312	-448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTTGGGATTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	130027394	130018299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250
ENSMUSG00000025534.18_130018422_130028369_1	chr5	-	1163	8	ISM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	3521	570	3337	-570	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGAGGTCACGGTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	130028369	130018421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181
ENSMUSG00000025534.18_130018858_130028910_1	chr5	-	1199	8	ISM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	2980	1006	2796	-1006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTCTGTTGGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	130028910	130018857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767
ENSMUSG00000025534.18_130022258_130029230_1	chr5	-	1093	8	ISM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	2660	4406	2476	-4406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCGGTTGATTGTCACGA	NA	NA	NA	NA	NA	NA	NA	NA	130029230	130022257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201
ENSMUSG00000025534.18_130022296_130029297_1	chr5	-	1122	8	ISM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	2593	4444	2409	-4444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGTATGGAGCAGACGCAA	NA	NA	NA	NA	NA	NA	NA	NA	130029297	130022295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201
ENSMUSG00000025534.18_130024326_130029674_1	chr5	-	1107	8	ISM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	2216	6474	2032	3174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGTGAGCAACGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	130029674	130024325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597
ENSMUSG00000025534.18_130026620_130029783_1	chr5	-	1170	7	ISM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	2107	8768	1923	880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGCTCTTTCTTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	130029783	130026619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597
ENSMUSG00000025534.18_130026746_130031498_1	chr5	-	1095	8	ISM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	392	8894	208	754	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGGCACCACCTAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	130031498	130026745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
ENSMUSG00000025534.18_130026858_130031669_1	chr5	-	1244	7	ISM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	221	9006	37	642	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGCCCGCCCCCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	130031669	130026857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
ENSMUSG00000025534.18_130027251_130031806_1	chr5	-	1202	6	ISM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	84	9399	84	249	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGGAGCTGTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	130031806	130027250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
ENSMUSG00000025538.16_129878855_129888691_1	chr5	+	422	6	ISM	ENSMUSG00000025538.16	ENST00000652303.1	678	7	94	2879	94	-2879	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGACAAAGCTGAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	129878854	129888691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677
ENSMUSG00000025538.16_129881791_129891520_1	chr5	+	414	6	ISM	ENSMUSG00000025538.16	ENST00000652303.1	678	7	3030	50	3030	-50	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCTGCGCCTCCAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	129881790	129891520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129891479
ENSMUSG00000025538.16_129882879_129888955_1	chr5	+	367	5	ISM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	7052	3936	4118	-2615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACCAACCTGCTGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	129882878	129888955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910
ENSMUSG00000025544.14_122344450_122380927_1	chr14	+	1244	9	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	0	16089	0	-15201	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTGGAAACATCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	122344449	122380927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818
ENSMUSG00000025544.14_122344680_122384154_1	chr14	+	1225	11	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	230	12862	0	-11974	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCACACCTGCTGGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	122344679	122384154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076
ENSMUSG00000025544.14_122344817_122385414_1	chr14	+	1145	12	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	367	11602	137	-10714	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGGAAAACAAATGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	122344816	122385414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399
ENSMUSG00000025544.14_122361182_122387283_1	chr14	+	1125	12	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	16732	9733	16502	-8845	internal_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGAATCTAATCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	122361181	122387283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261
ENSMUSG00000025544.14_122363518_122387421_1	chr14	+	1249	11	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	19068	9595	18838	-8707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTCATAAGCGCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	122363517	122387421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261
ENSMUSG00000025544.14_122370751_122388202_1	chr14	+	1153	11	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	26301	8814	26071	-7926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACACAAAGCCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	122370750	122388202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145
ENSMUSG00000025544.14_122370801_122388254_1	chr14	+	1155	11	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	26351	8762	26121	-7874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCATCTTTATACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	122370800	122388254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145
ENSMUSG00000025544.14_122374844_122389427_1	chr14	+	1171	11	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	30394	7589	30164	-6701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTATTACCTGTTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	122374843	122389427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375
ENSMUSG00000025544.14_122377131_122392792_1	chr14	+	1145	11	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	32681	4224	32451	-3336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTGATATACGCCATAC	NA	NA	NA	NA	NA	NA	NA	NA	122377130	122392792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739
ENSMUSG00000025544.14_122378609_122392911_1	chr14	+	1210	10	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	34159	4105	33929	-3217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATGTAAATTATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	122378608	122392911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739
ENSMUSG00000025544.14_122379774_122396128_1	chr14	+	1166	10	ISM	ENSMUSG00000025544.14	ENSMUST00000171318.2	1494	13	35094	0	35094	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCCCAGTGTGTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	122379773	122396128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ENSMUSG00000025544.14_122382508_122396268_1	chr14	+	1116	8	ISM	ENSMUSG00000025544.14	ENSMUST00000171318.2	1494	13	37828	-140	37828	140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGCACCTGCACCTACAA	NA	NA	NA	NA	NA	NA	NA	NA	122382507	122396268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ENSMUSG00000025544.14_122382546_122396341_1	chr14	+	1151	8	ISM	ENSMUSG00000025544.14	ENSMUST00000171318.2	1494	13	37866	-213	37866	213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTTCTCAGTGAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	122382545	122396341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ENSMUSG00000025544.14_122382593_122396398_1	chr14	+	1161	8	ISM	ENSMUSG00000025544.14	ENSMUST00000171318.2	1494	13	37913	-270	37913	270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAACTTTTCAATACTTC	NA	NA	NA	NA	NA	NA	NA	NA	122382592	122396398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ENSMUSG00000025544.14_122384161_122396537_1	chr14	+	1167	7	ISM	ENSMUSG00000025544.14	ENSMUST00000171318.2	1494	13	39481	-409	39481	409	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGGTAATTTTGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	122384160	122396537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ENSMUSG00000025544.14_122387304_122396656_1	chr14	+	1150	5	ISM	ENSMUSG00000025544.14	ENSMUST00000171318.2	1494	13	42624	-528	42624	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCCATGGTATTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	122387303	122396656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ENSMUSG00000025544.14_122387341_122396721_1	chr14	+	1178	5	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	42891	295	42661	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTAATAAATATTGTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	122387340	122396721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ENSMUSG00000025544.14_122388227_122396862_1	chr14	+	1157	4	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	43777	154	43547	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGAAACTGTCGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	122388226	122396862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122388298_122389375_122389488_122392739_122392912_122396060
ENSMUSG00000025544.14_122389375_122397016_1	chr14	+	1241	3	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	44925	0	44695	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTCCAAAGTGTAGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	122389374	122397016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122389488_122392739_122392912_122396060
ENSMUSG00000025545.11_122419116_122621734_1	chr14	+	943	7	ISM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	0	17912	0	-17826	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGTTTTTGTTGATAC	NA	NA	NA	NA	NA	NA	NA	NA	122419115	122621734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609
ENSMUSG00000025545.11_122548669_122639381_1	chr14	+	875	7	ISM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	129553	265	-59982	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATCGACATGCCATTAC	NA	NA	NA	NA	NA	NA	NA	NA	122548668	122639381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ENSMUSG00000025545.11_122548718_122639436_1	chr14	+	881	7	ISM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	129602	210	-59933	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATCAAGGAAAAATGATC	NA	NA	NA	NA	NA	NA	NA	NA	122548717	122639436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ENSMUSG00000025545.11_122548761_122639494_1	chr14	+	896	7	ISM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	129645	152	-59890	-66	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGGCTTCTTAAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	122548760	122639494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ENSMUSG00000025545.11_122608651_122639639_1	chr14	+	961	6	ISM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	189535	7	0	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGCTTATGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	122608650	122639639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ENSMUSG00000025545.11_122608702_122639373_1	chr14	+	542	5	FSM	ENSMUSG00000025545.11	ENST00000376354.5	780	5	51	187	51	-187	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGGAAGTATGATCGACAT	NA	NA	NA	NA	NA	NA	NA	NA	122608701	122639373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_122608842_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ENSMUSG00000025545.11_122608754_122639426_1	chr14	+	543	5	FSM	ENSMUSG00000025545.11	ENST00000376354.5	780	5	103	134	103	-134	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGCCACATCCATCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	122608753	122639426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_122608842_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ENSMUSG00000025545.11_122608809_122639479_1	chr14	+	541	5	FSM	ENSMUSG00000025545.11	ENST00000376354.5	780	5	158	81	158	-81	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGCTGAATGGATACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	122608808	122639479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_122608842_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ENSMUSG00000025555.15_121512794_121517297_1	chr14	+	565	6	ISM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	239818	3859	239818	-3859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGCTGTGGGTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	121512793	121517297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247
ENSMUSG00000025555.15_121514410_121519959_1	chr14	+	566	4	ISM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	241434	1197	241434	-1197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACCAACCTCTTTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	121514409	121519959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_121514478_121517247_121517356_121518231_121518384_121519721
ENSMUSG00000025572.19_117657054_117665131_1	chr11	-	1308	11	ISM	ENSMUSG00000025572.19	ENSMUST00000026659.10	2865	20	6334	240	54	-240	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGACCTGAGATCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	117665131	117657053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047
ENSMUSG00000025572.19_117659747_117663926_1	chr11	-	717	6	ISM	ENSMUSG00000025572.19	ENST00000591436.5	1009	8	1259	0	1259	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCCAGCCTGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	117663926	117659746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663772
ENSMUSG00000025572.19_117659765_117665913_1	chr11	-	1258	10	ISM	ENSMUSG00000025572.19	ENST00000322914.7	2190	16	3954	18	-728	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGCAGATCCGGAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	117665913	117659764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833
ENSMUSG00000025572.19_117659997_117664301_1	chr11	-	683	6	ISM	ENSMUSG00000025572.19	ENST00000591436.5	1009	8	884	250	884	-250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCTGCACCACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	117664301	117659996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663772_117663925_117664188
ENSMUSG00000025572.19_117660010_117666486_1	chr11	-	1301	10	ISM	ENSMUSG00000025572.19	ENST00000322914.7	2190	16	3381	263	-1301	-263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGGCTGCCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	117666486	117660009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414
ENSMUSG00000025572.19_117660073_117666547_1	chr11	-	1299	10	ISM	ENSMUSG00000025572.19	ENST00000322914.7	2190	16	3320	326	-1362	-326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAACACCATGTATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	117666547	117660072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414
ENSMUSG00000025572.19_117660276_117665120_1	chr11	-	630	6	ISM	ENSMUSG00000025572.19	ENST00000591436.5	1009	8	65	529	65	-529	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTTCCCGTCGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	117665120	117660275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_117660353_117661294_117661371_117661516_117661613_117663772_117663925_117664188_117664345_117665047
ENSMUSG00000025572.19_117663492_117669867_1	chr11	-	1631	9	FSM	ENSMUSG00000025572.19	ENST00000589553.5	1630	9	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGCCTTCCCACCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	117669867	117663491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117667063_117667170_117669069_117669229_117669530_117669578_117669731
ENSMUSG00000025572.19_117663589_117669171_1	chr11	-	1297	9	ISM	ENSMUSG00000025572.19	ENST00000322914.7	2190	16	696	3842	696	-96	internal_fragment	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGTGGGCCAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	117669171	117663588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069
ENSMUSG00000025572.19_117664189_117669867_1	chr11	-	1295	9	ISM	ENSMUSG00000025572.19	ENST00000322914.7	2190	16	0	4442	0	-696	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGCAAGGGATAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	117669867	117664188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669578_117669731
ENSMUSG00000025572.19_117665047_117669867_1	chr11	-	1140	8	FSM	ENSMUSG00000025572.19	ENST00000306591.11	1140	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGCTACCAGTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	117669867	117665046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669578_117669731
ENSMUSG00000025574.14_117706450_117707943_1	chr11	-	652	3	ISM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	8975	98	8975	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCATTTATGCCTAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	117707943	117706449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_117706966_117707272_117707393_117707927
ENSMUSG00000025574.14_117706450_117707990_1	chr11	-	699	3	ISM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	8928	98	8928	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCATTTATGCCTAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	117707990	117706449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_117706966_117707272_117707393_117707927
ENSMUSG00000025574.14_117706596_117708017_1	chr11	-	580	3	ISM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	8901	244	8901	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTAGCGGTCCCGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	117708017	117706595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_117706966_117707272_117707393_117707927
ENSMUSG00000025574.14_117706837_117716643_1	chr11	-	667	6	NNC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	275	-485	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTGTCAGGAAGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	117716643	117706836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716520
ENSMUSG00000025574.14_117706877_117716643_1	chr11	-	640	7	FSM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	275	525	275	-525	multi-exon	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAAGAACTGTCTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	117716643	117706876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716426_117716459_117716539
ENSMUSG00000025574.14_117706941_117716679_1	chr11	-	612	7	FSM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	239	589	239	-589	multi-exon	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCACTCCGTGTGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	117716679	117706940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716426_117716459_117716539
ENSMUSG00000025574.14_117706947_117716708_1	chr11	-	617	6	NNC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	210	-595	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGACAAGTATCACTCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	117716708	117706946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716525
ENSMUSG00000025574.14_117707927_117716918_1	chr11	-	707	5	ISM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	0	1575	0	-1575	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGATGTCTGACTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	117716918	117707926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_117708018_117712922_117713017_117715496_117715608_117716426_117716459_117716539
ENSMUSG00000025575.15_118298099_118299586_1	chr11	-	902	2	ISM	ENSMUSG00000025575.15	ENSMUST00000164927.2	1379	4	7034	-371	7034	371	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGGGGGGGGGGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	118299586	118298098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118298921_118299506
ENSMUSG00000025575.15_118298150_118299640_1	chr11	-	905	2	ISM	ENSMUSG00000025575.15	ENSMUST00000164927.2	1379	4	6980	-320	6980	320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAACCCTGGGAGCACACA	NA	NA	NA	NA	NA	NA	NA	NA	118299640	118298149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118298921_118299506
ENSMUSG00000025575.15_118298777_118309849_1	chr11	-	1334	5	FSM	ENSMUSG00000025575.15	ENSMUST00000092378.10	2995	5	0	1661	0	-307	multi-exon	TRUE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGACATCTCTGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	118309849	118298776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308633_118309755
ENSMUSG00000025575.15_118299628_118309849_1	chr11	-	917	4	ISM	ENSMUSG00000025575.15	ENSMUST00000106288.8	2873	5	29	2513	0	-1158	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTGATGAACGAGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	118309849	118299627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118299711_118301678_118302338_118308399_118308481_118309755
ENSMUSG00000025576.18_118381506_118385030_1	chr11	-	617	2	ISM	ENSMUSG00000025576.18	ENST00000583458.5	2636	12	115996	922	115996	475	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGGCTGACACGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	118385030	118381505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118382068_118384975
ENSMUSG00000025576.18_118381725_118387325_1	chr11	-	636	4	ISM	ENSMUSG00000025576.18	ENST00000583458.5	2636	12	113701	1141	113701	256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTGCTCCCCAGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	118387325	118381724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118382068_118384975_118385055_118386043_118386109_118387176
ENSMUSG00000025576.18_118381981_118392455_1	chr11	-	660	7	ISM	ENSMUSG00000025576.18	ENST00000583458.5	2636	12	108571	1397	108571	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGTTAAGATCCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	118392455	118381980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118382068_118384975_118385055_118386043_118386109_118387176_118387358_118387763_118387897_118388012_118388067_118392394
ENSMUSG00000025576.18_118384976_118393760_1	chr11	-	666	7	ISM	ENSMUSG00000025576.18	ENST00000583458.5	2636	12	107266	4392	107266	-2156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAGAGCTGCCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	118393760	118384975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118385055_118386043_118386109_118387176_118387358_118387763_118387897_118388012_118388067_118392394_118392456_118393667
ENSMUSG00000025576.18_118384976_118394599_1	chr11	-	720	8	ISM	ENSMUSG00000025576.18	ENST00000583458.5	2636	12	106427	4392	106427	-2156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAGAGCTGCCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	118394599	118384975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118385055_118386043_118386109_118387176_118387358_118387763_118387897_118388012_118388067_118392394_118392456_118393667_118393761_118394545
ENSMUSG00000025576.18_118386050_118396482_1	chr11	-	669	8	ISM	ENSMUSG00000025576.18	ENST00000583458.5	2636	12	104544	5466	104544	-3230	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGGTAAGGCTAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	118396482	118386049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118386109_118387176_118387358_118387763_118387897_118388012_118388067_118392394_118392456_118393667_118393761_118394545_118394600_118396448
ENSMUSG00000025576.18_118387176_118396586_1	chr11	-	715	7	ISM	ENSMUSG00000025576.18	ENST00000583458.5	2636	12	104440	6592	104440	-4356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTAGCCCTGGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	118396586	118387175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118387358_118387763_118387897_118388012_118388067_118392394_118392456_118393667_118393761_118394545_118394600_118396448
ENSMUSG00000025576.18_118387326_118404034_1	chr11	-	624	8	ISM	ENSMUSG00000025576.18	ENSMUST00000017576.11	3150	15	396364	5345	96992	-4506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTGGGCGGGGCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	118404034	118387325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118387358_118387763_118387897_118388012_118388067_118392394_118392456_118393667_118393761_118394545_118394600_118396448_118396587_118403975
ENSMUSG00000025576.18_118387879_118404194_1	chr11	-	637	7	ISM	ENSMUSG00000025576.18	ENSMUST00000103023.8	2809	14	247673	7289	96832	-5059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCACGGGCACCGCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	118404194	118387878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118387897_118388012_118388067_118392394_118392456_118393667_118393761_118394545_118394600_118396448_118396587_118403975
ENSMUSG00000025576.18_118392398_118501024_1	chr11	-	638	6	ISM	ENSMUSG00000025576.18	ENSMUST00000103023.8	2809	14	150843	11808	2	-9578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTGAGAACCCAAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	118501024	118392397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118392456_118393667_118393761_118394545_118394600_118396448_118396587_118403975_118404231_118500984
ENSMUSG00000025579.15_119158852_119176281_1	chr11	+	3495	20	FSM	ENSMUSG00000025579.15	ENSMUST00000106259.9	3633	20	139	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	119158851	119176281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ENSMUSG00000025580.16_119179189_119185514_1	chr11	-	1029	8	ISM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	5401	0	5401	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	119185514	119179188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396
ENSMUSG00000025580.16_119179189_119185529_1	chr11	-	1044	8	ISM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	5386	0	5386	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2435	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	119185529	119179188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396
ENSMUSG00000025580.16_119179330_119186354_1	chr11	-	959	9	ISM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	4561	141	4561	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1737	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCTATTTAATGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	119186354	119179329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298
ENSMUSG00000025580.16_119179360_119186908_1	chr11	-	952	10	ISM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	4007	171	4007	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1796	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCACCGAGGCCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	119186908	119179359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892
ENSMUSG00000025580.16_119179486_119186959_1	chr11	-	977	9	ISM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	3956	297	3956	-297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1755	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGTTGGCGGCTGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	119186959	119179485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892
ENSMUSG00000025580.16_119179486_119188703_1	chr11	-	1050	10	ISM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	2212	297	2212	-297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGTTGGCGGCTGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	119188703	119179485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630
ENSMUSG00000025580.16_119179723_119190741_1	chr11	-	982	10	ISM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	174	534	174	-534	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1976	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAACAGAGAACTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	119190741	119179722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
ENSMUSG00000025580.16_119183667_119190844_1	chr11	-	983	9	ISM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	71	4478	71	-4478	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1783	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTTCCGGTCAGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	119190844	119183666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
ENSMUSG00000025584.18_80863757_80950442_1	chr7	+	584	7	ISM	ENSMUSG00000025584.18	ENST00000339708.9	2541	21	301	32828	301	-32828	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGTGAAGACCACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	80863756	80950442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387
ENSMUSG00000025584.18_80930924_80956531_1	chr7	+	619	7	ISM	ENSMUSG00000025584.18	ENST00000339708.9	2541	21	67468	26739	67468	-26739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGGAAAAATGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	80930923	80956531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80956442
ENSMUSG00000025584.18_80932686_80964935_1	chr7	+	618	9	ISM	ENSMUSG00000025584.18	ENST00000339708.9	2541	21	69230	18335	69230	-18335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGGGGCTGCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	80932685	80964935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80956442_80956532_80958552_80958605_80958686_80958730_80964857
ENSMUSG00000025584.18_80941998_80966767_1	chr7	+	587	9	ISM	ENSMUSG00000025584.18	ENST00000339708.9	2541	21	78542	16503	78542	-16503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATCACCAAGGTCGGTC	NA	NA	NA	NA	NA	NA	NA	NA	80941997	80966767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709
ENSMUSG00000025584.18_80942878_80967048_1	chr7	+	573	9	ISM	ENSMUSG00000025584.18	ENST00000339708.9	2541	21	79422	16222	79422	-16222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCTGCCCAGGAAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	80942877	80967048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_80942935_80945425_80945515_80950387_80950467_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033
ENSMUSG00000025584.18_80945455_80967196_1	chr7	+	635	8	ISM	ENSMUSG00000025584.18	ENST00000339708.9	2541	21	81999	16074	81999	-16074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCCATCTCCTAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	80945454	80967196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_80945515_80950387_80950467_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033
ENSMUSG00000025584.18_80964881_80970512_1	chr7	+	586	6	ISM	ENSMUSG00000025584.18	ENST00000339708.9	2541	21	101425	12758	101425	-12758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTCTAACCCCTACCAC	NA	NA	NA	NA	NA	NA	NA	NA	80964880	80970512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399
ENSMUSG00000025584.18_80967032_80973856_1	chr7	+	641	5	ISM	ENSMUSG00000025584.18	ENST00000339708.9	2541	21	103576	9414	103576	-9414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCGGGAAACCAGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	80967031	80973856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763
ENSMUSG00000025584.18_80968818_80973961_1	chr7	+	580	4	ISM	ENSMUSG00000025584.18	ENST00000339708.9	2541	21	105362	9309	105362	-9309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTTAAGCAAATGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	80968817	80973961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_80968865_80969070_80969207_80970399_80970599_80973763
ENSMUSG00000025584.18_80969116_80976087_1	chr7	+	597	4	ISM	ENSMUSG00000025584.18	ENST00000339708.9	2541	21	105660	7183	105660	-7183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACAGCATCAACAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	80969115	80976087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_80969207_80970399_80970599_80973763_80973982_80975998
ENSMUSG00000025584.18_80970399_80977836_1	chr7	+	609	4	ISM	ENSMUSG00000025584.18	ENST00000339708.9	2541	21	106943	5434	106943	-5434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATCAAAAGAATGATGATT	NA	NA	NA	NA	NA	NA	NA	NA	80970398	80977836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_80970599_80973763_80973982_80975998_80976129_80977775
ENSMUSG00000025584.18_80973831_80983186_1	chr7	+	602	5	ISM	ENSMUSG00000025584.18	ENST00000339708.9	2541	21	110375	84	110375	-84	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAGCACCTAGATGACAA	NA	NA	NA	NA	NA	NA	NA	NA	80973830	80983186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ENSMUSG00000025584.18_80973911_80983241_1	chr7	+	577	5	ISM	ENSMUSG00000025584.18	ENST00000339708.9	2541	21	110455	29	110455	-29	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGAAGCCTCCGCCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	80973910	80983241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ENSMUSG00000025586.18_80997799_81001690_1	chr7	-	764	4	ISM	ENSMUSG00000025586.18	ENST00000616959.4	1772	10	20259	0	20259	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1600	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAACAACAACCACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	81001690	80997798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491
ENSMUSG00000025586.18_80997799_81007166_1	chr7	-	1105	7	ISM	ENSMUSG00000025586.18	ENST00000616959.4	1772	10	14783	0	14783	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2706	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAACAACAACCACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	81007166	80997798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052
ENSMUSG00000025586.18_80998028_81009729_1	chr7	-	1129	8	ISM	ENSMUSG00000025586.18	ENST00000616959.4	1772	10	12220	229	12220	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2057	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGCAACTCGCTGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	81009729	80998027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476
ENSMUSG00000025586.18_80999538_81007166_1	chr7	-	718	6	ISM	ENSMUSG00000025586.18	ENST00000616959.4	1772	10	14783	1739	14783	-1510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCTCTGGGCATTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	81007166	80999537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052
ENSMUSG00000025586.18_81000091_81011557_1	chr7	-	1114	7	ISM	ENSMUSG00000025586.18	ENST00000616959.4	1772	10	10392	2292	10392	-2063	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1723	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGCGGTTAGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	81011557	81000090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333
ENSMUSG00000025586.18_81000142_81009548_1	chr7	-	658	6	ISM	ENSMUSG00000025586.18	ENST00000616959.4	1772	10	12401	2343	12401	-2114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCACCGCTGCTTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	81009548	81000141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476
ENSMUSG00000025586.18_81001493_81021777_1	chr7	-	1034	7	ISM	ENSMUSG00000025586.18	ENST00000616959.4	1772	10	172	3694	172	-3465	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGTGTCCTACTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	81021777	81001492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759
ENSMUSG00000025586.18_81001555_81009729_1	chr7	-	730	5	ISM	ENSMUSG00000025586.18	ENST00000616959.4	1772	10	12220	3756	12220	-3527	internal_fragment	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTATTTGGTGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	81009729	81001554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476
ENSMUSG00000025586.18_81001559_81021842_1	chr7	-	1033	7	ISM	ENSMUSG00000025586.18	ENST00000616959.4	1772	10	107	3760	107	-3531	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATGACCTATTTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	81021842	81001558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759
ENSMUSG00000025586.18_81001605_81021918_1	chr7	-	1063	7	ISM	ENSMUSG00000025586.18	ENST00000616959.4	1772	10	31	3806	31	-3577	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1445	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCCTTGCACGGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	81021918	81001604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759
ENSMUSG00000025586.18_81005682_81086025_1	chr7	-	1023	7	ISM	ENSMUSG00000025586.18	ENST00000611031.4	2969	11	101	8905	101	-7654	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGGCCTGAGTGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	81086025	81005681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950
ENSMUSG00000025586.18_81009583_81086125_1	chr7	-	735	4	ISM	ENSMUSG00000025586.18	ENST00000611031.4	2969	11	1	12806	1	-11555	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATGGCCAGGAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	81086125	81009582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81009730_81011333_81011558_81021759_81021949_81085950
ENSMUSG00000025586.18_81009696_81104424_1	chr7	-	665	5	ISM	ENSMUSG00000025586.18	ENST00000615198.4	2073	12	84	11897	-1	-11668	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTATGACGGGAAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	81104424	81009695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
ENSMUSG00000025592.18_112208137_112549655_1	chrX	+	713	4	ISM	ENSMUSG00000025592.18	ENST00000373125.9	2430	12	179	195933	179	-191949	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTCAGGGTAATGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	112208136	112549655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_112208633_112362154_112362194_112465944_112466058_112549590
ENSMUSG00000025592.18_112208193_112549708_1	chrX	+	710	4	ISM	ENSMUSG00000025592.18	ENST00000373125.9	2430	12	235	195880	235	-191896	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCTACGACAGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	112208192	112549708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_112208633_112362154_112362194_112465944_112466058_112549590
ENSMUSG00000025592.18_112465946_112745590_1	chrX	+	1762	11	NNC	ENSMUSG00000025592.18	novel	1766	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1951	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTTCTCTGAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112465945	112745590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_112466058_112549590_112549723_112614405_112614565_112633941_112634115_112659967_112660104_112724539_112724689_112724815_112724962_112727319_112727467_112729645_112729712_112740784_112740832_112745095
ENSMUSG00000025592.18_112465946_112745590_2	chrX	+	1761	11	NNC	ENSMUSG00000025592.18	novel	1766	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2052	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTTCTCTGAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112465945	112745590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_112466058_112549590_112549723_112614405_112614565_112633941_112634115_112659967_112660104_112724539_112724689_112724813_112724962_112727319_112727467_112729645_112729712_112740784_112740832_112745098
ENSMUSG00000025592.18_112465946_112745590_3	chrX	+	1763	11	NNC	ENSMUSG00000025592.18	novel	1766	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTTCTCTGAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112465945	112745590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_112466058_112549590_112549723_112614405_112614565_112633941_112634115_112659967_112660104_112724539_112724689_112724813_112724962_112727319_112727467_112729645_112729712_112740785_112740832_112745095
ENSMUSG00000025592.18_112465946_112745590_4	chrX	+	1761	11	NNC	ENSMUSG00000025592.18	novel	1766	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTTCTCTGAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112465945	112745590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_112466058_112549590_112549723_112614405_112614565_112633941_112634115_112659967_112660104_112724542_112724689_112724813_112724962_112727319_112727467_112729645_112729712_112740784_112740832_112745095
ENSMUSG00000025592.18_112465946_112745590_5	chrX	+	1757	11	NNC	ENSMUSG00000025592.18	novel	1766	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTTCTCTGAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112465945	112745590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_112466058_112549590_112549723_112614412_112614565_112633941_112634115_112659967_112660104_112724539_112724689_112724813_112724962_112727319_112727467_112729645_112729712_112740784_112740832_112745095
ENSMUSG00000025592.18_112465946_112745590_6	chrX	+	1717	10	FSM	ENSMUSG00000025592.18	ENST00000510272.5	1718	10	3	-2	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTTCTCTGAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112465945	112745590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_112466058_112549590_112549723_112614405_112614565_112633941_112634115_112659967_112660104_112724539_112724689_112724813_112724962_112727319_112727467_112729645_112729712_112745095
ENSMUSG00000025592.18_112465946_112745590_7	chrX	+	1764	11	FSM	ENSMUSG00000025592.18	ENST00000373131.5	1766	11	4	-2	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTTCTCTGAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112465945	112745590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_112466058_112549590_112549723_112614405_112614565_112633941_112634115_112659967_112660104_112724539_112724689_112724813_112724962_112727319_112727467_112729645_112729712_112740784_112740832_112745095
ENSMUSG00000025592.18_112465946_112745590_8	chrX	+	1763	11	NNC	ENSMUSG00000025592.18	novel	1766	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTTCTCTGAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112465945	112745590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_112466058_112549590_112549723_112614405_112614565_112633941_112634115_112659967_112660104_112724539_112724689_112724813_112724962_112727320_112727467_112729645_112729712_112740784_112740832_112745095
ENSMUSG00000025597.14_113384030_113435526_1	chrX	+	1006	4	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	-10	32882	0	-32882	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATCATTTGTTTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	113384029	113435526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_113384549_113431324_113431477_113431995_113432133_113435328
ENSMUSG00000025597.14_113384301_113452747_1	chrX	+	996	6	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	261	15661	261	-15661	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	916	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGAAGCTACTAATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	113384300	113452747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_113384549_113431324_113431477_113431995_113432133_113435328_113435526_113439719_113439933_113452698
ENSMUSG00000025597.14_113384456_113452780_1	chrX	+	874	6	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	416	15628	416	-15628	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTTGCCTGAGAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	113384455	113452780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_113384549_113431324_113431477_113431995_113432133_113435328_113435526_113439719_113439933_113452698
ENSMUSG00000025597.14_113384496_113452842_1	chrX	+	896	6	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	456	15566	456	-15566	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCACTTTATGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	113384495	113452842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_113384549_113431324_113431477_113431995_113432133_113435328_113435526_113439719_113439933_113452698
ENSMUSG00000025597.14_113431336_113459073_1	chrX	+	899	6	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	47296	9335	47296	-9335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCCGAACCAACAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	113431335	113459073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_113431477_113431995_113432133_113435328_113435526_113439719_113439933_113452698_113452886_113459049
ENSMUSG00000025597.14_113431393_113459118_1	chrX	+	887	6	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	47353	9290	47353	-9290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGACTTCAATTTGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	113431392	113459118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_113431477_113431995_113432133_113435328_113435526_113439719_113439933_113452698_113452886_113459049
ENSMUSG00000025597.14_113431447_113459166_1	chrX	+	881	6	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	47407	9242	47407	-9242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAGGAAGAGATGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	113431446	113459166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_113431477_113431995_113432133_113435328_113435526_113439719_113439933_113452698_113452886_113459049
ENSMUSG00000025597.14_113432113_113461211_1	chrX	+	888	6	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	48073	7197	48073	-7197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATGGAGCTATCTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	113432112	113461211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_113432133_113435328_113435526_113439719_113439933_113452698_113452886_113459049_113459275_113461165
ENSMUSG00000025597.14_113435390_113463702_1	chrX	+	938	6	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	51350	4706	51350	-4706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACGTGATGGAAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	113435389	113463702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_113435526_113439719_113439933_113452698_113452886_113459049_113459275_113461165_113461329_113463688
ENSMUSG00000025597.14_113435474_113463732_1	chrX	+	884	6	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	51434	4676	51434	-4676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGAATTCTTTGACCCG	NA	NA	NA	NA	NA	NA	NA	NA	113435473	113463732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_113435526_113439719_113439933_113452698_113452886_113459049_113459275_113461165_113461329_113463688
ENSMUSG00000025597.14_113439883_113468275_1	chrX	+	877	6	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	55843	133	55843	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGTTCCTCGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	113439882	113468275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_113439933_113452698_113452886_113459049_113459275_113461165_113461329_113463688_113463902_113468236
ENSMUSG00000025597.14_113439911_113468359_1	chrX	+	933	6	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	55871	49	55871	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAATACCGTTGAGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	113439910	113468359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_113439933_113452698_113452886_113459049_113459275_113461165_113461329_113463688_113463902_113468236
ENSMUSG00000025597.14_113452767_113468408_1	chrX	+	892	5	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	68727	0	68727	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTCTTGTAAAATTATCT	NA	NA	NA	NA	NA	NA	NA	NA	113452766	113468408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_113452886_113459049_113459275_113461165_113461329_113463688_113463902_113468236
ENSMUSG00000025607.16_30747553_30801416_1	chr6	-	2905	13	ISM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	72258	0	72258	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGTTGTTATTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	30801416	30747552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302
ENSMUSG00000025607.16_30747553_30801479_1	chr6	-	2968	13	ISM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	72195	0	72195	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGTTGTTATTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	30801479	30747552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302
ENSMUSG00000025607.16_30747958_30835803_1	chr6	-	2908	16	ISM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	37871	405	37871	-405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCTTAGCAAGGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	30835803	30747957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672
ENSMUSG00000025607.16_30748209_30840545_1	chr6	-	2940	19	ISM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	33129	656	33129	-656	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGCGGGATGCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	30840545	30748208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469
ENSMUSG00000025609.16_31408076_31435978_1	chr6	+	535	5	ISM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	32406	57768	32406	-57768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCTAGAGACACTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	31408075	31435978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889
ENSMUSG00000025609.16_31426463_31451328_1	chr6	+	533	5	ISM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	50793	42418	50793	-42418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTCAGTGGGTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	31426462	31451328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233
ENSMUSG00000025609.16_31473629_31484947_1	chr6	+	521	3	ISM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	97959	8799	97959	-8799	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAATTAGCCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	31473628	31484947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_31473707_31476821_31476877_31484559
ENSMUSG00000025613.14_87280619_87281731_1	chr16	-	375	2	ISM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	10945	-257	10945	257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTGTTTATCCCATA	NA	NA	NA	NA	NA	NA	NA	NA	87281731	87280618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87280954_87281691
ENSMUSG00000025613.14_87280681_87281770_1	chr16	-	352	2	ISM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	10906	-195	10906	195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATCTCATTTCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	87281770	87280680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87280954_87281691
ENSMUSG00000025613.14_87280739_87281813_1	chr16	-	337	2	ISM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	10863	-137	10863	137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTTCTCATTGTATAC	NA	NA	NA	NA	NA	NA	NA	NA	87281813	87280738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87280954_87281691
ENSMUSG00000025613.14_87280876_87282793_1	chr16	-	435	4	ISM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	9883	0	9883	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTTGTCATAGGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	87282793	87280875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721
ENSMUSG00000025613.14_87281799_87283243_1	chr16	-	370	4	ISM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	9433	923	9433	-923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTAAAGGATATGTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	87283243	87281798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87281812_87282467_87282633_87282721_87282794_87283123
ENSMUSG00000025613.14_87282615_87283549_1	chr16	-	361	5	ISM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	9127	1739	9127	-1739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTATGCTATTAAGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	87283549	87282614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482
ENSMUSG00000025613.14_87282760_87284481_1	chr16	-	365	5	ISM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	8195	1884	8195	-1884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTGAATTGGCTAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	87284481	87282759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421
ENSMUSG00000025613.14_87283321_87285731_1	chr16	-	371	4	ISM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	6945	2445	6945	-2445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAGTAATGGTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	87285731	87283320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87283409_87283482_87283550_87284421_87284601_87285694
ENSMUSG00000025613.14_87283483_87285832_1	chr16	-	384	3	ISM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	6844	2607	6844	-2607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTATGTTGGAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	87285832	87283482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87283550_87284421_87284601_87285694
ENSMUSG00000025613.14_87283483_87287270_1	chr16	-	446	4	ISM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	5406	2607	5406	-2607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTATGTTGGAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	87287270	87283482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87283550_87284421_87284601_87285694_87285833_87287208
ENSMUSG00000025613.14_87284458_87287409_1	chr16	-	380	4	ISM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	5352	4244	5267	-3582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTATGCTAACAAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	87287409	87284457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87284601_87285694_87285833_87287208_87287271_87287372
ENSMUSG00000025613.14_87284510_87287461_1	chr16	-	380	4	ISM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	5300	4296	5215	-3634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGGTGCAAATGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	87287461	87284509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87284601_87285694_87285833_87287208_87287271_87287372
ENSMUSG00000025613.14_87284559_87287513_1	chr16	-	383	4	ISM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	5248	4345	5163	-3683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAGGGAGAGGAGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	87287513	87284558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87284601_87285694_87285833_87287208_87287271_87287372
ENSMUSG00000025613.14_87285819_87288339_1	chr16	-	407	4	ISM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	4422	5605	4337	-4943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCCTCAGTATTACATG	NA	NA	NA	NA	NA	NA	NA	NA	87288339	87285818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87285833_87287208_87287271_87287372_87287554_87288189
ENSMUSG00000025613.14_87287522_87292676_1	chr16	-	413	5	ISM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	85	7308	0	-6646	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCATGAGATCCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	87292676	87287521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ENSMUSG00000025616.15_87251757_87255605_1	chr16	+	311	2	ISM	ENSMUSG00000025616.15	ENSMUST00000119504.8	2562	17	-110	24593	-93	-24593	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACGGTGGCCTCAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	87251756	87255605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_87251991_87255528
ENSMUSG00000025616.15_87251867_87258937_1	chr16	+	311	3	ISM	ENSMUSG00000025616.15	ENSMUST00000119504.8	2562	17	0	21261	0	-21261	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTGTAAGACTGACAATA	NA	NA	NA	NA	NA	NA	NA	NA	87251866	87258937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_87251991_87255528_87255631_87258852
ENSMUSG00000025616.15_87267280_87270029_1	chr16	+	312	4	ISM	ENSMUSG00000025616.15	ENSMUST00000119504.8	2562	17	15413	10169	15413	-10169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTACTGAAAAATTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	87267279	87270029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_87267338_87268599_87268731_87268968_87269057_87269994
ENSMUSG00000025616.15_87268644_87271535_1	chr16	+	320	4	ISM	ENSMUSG00000025616.15	ENSMUST00000119504.8	2562	17	16777	8663	16777	-8663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATCATGTGTGATGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	87268643	87271535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_87268731_87268968_87269057_87269994_87270074_87271469
ENSMUSG00000025616.15_87268969_87272361_1	chr16	+	316	4	ISM	ENSMUSG00000025616.15	ENSMUST00000119504.8	2562	17	17102	7837	17102	-7837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATTACTTTAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	87268968	87272361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_87269057_87269994_87270074_87271469_87271562_87272304
ENSMUSG00000025616.15_87276614_87279816_1	chr16	+	315	4	ISM	ENSMUSG00000025616.15	ENST00000399975.7	2930	18	24764	576	24747	-382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCAGGGCATTACACTGC	NA	NA	NA	NA	NA	NA	NA	NA	87276613	87279816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_87276678_87277762_87277858_87278601_87278689_87279747
ENSMUSG00000025626.17_52001172_52045820_1	chrX	+	4317	11	NNC	ENSMUSG00000025626.17	novel	4337	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGTCTGCTTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	52001171	52045820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_52001314_52005429_52005607_52006042_52006145_52020449_52020584_52020857_52020902_52029098_52029269_52029413_52029558_52031440_52031546_52034760_52034895_52042328_52042456_52042782
ENSMUSG00000025626.17_52001172_52045820_2	chrX	+	4314	11	NNC	ENSMUSG00000025626.17	novel	4350	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGTCTGCTTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	52001171	52045820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_52001314_52005429_52005614_52006042_52006145_52020449_52020584_52020857_52020902_52029101_52029269_52029413_52029551_52031440_52031546_52034760_52034895_52042328_52042456_52042782
ENSMUSG00000025626.17_52001172_52045820_3	chrX	+	4313	11	NNC	ENSMUSG00000025626.17	novel	4350	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGTCTGCTTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	52001171	52045820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_52001314_52005429_52005614_52006042_52006145_52020449_52020584_52020857_52020902_52029101_52029269_52029421_52029558_52031440_52031546_52034760_52034895_52042328_52042456_52042782
ENSMUSG00000025630.9_52077014_52110536_2	chrX	+	1285	8	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCACTTTTTGAATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	52077013	52110536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097610_52105223_52105307_52108981_52109029_52109199_52109277_52109943
ENSMUSG00000025630.9_52077014_52110536_3	chrX	+	1283	8	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCACTTTTTGAATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	52077013	52110536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52105211_52105307_52108981_52109029_52109199_52109277_52109943
ENSMUSG00000025645.9_108918585_108921223_1	chr9	+	1044	3	NNC	ENSMUSG00000025645.9	novel	1173	3	NA	NA	10	-115	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGGCTAGAAGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	108918584	108921223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108918716_108919797_108920074_108920586
ENSMUSG00000025645.9_108918595_108921225_1	chr9	+	1040	3	FSM	ENSMUSG00000025645.9	ENST00000442740.1	1173	3	20	113	20	-113	multi-exon	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTAGAAGCCCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	108918594	108921225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108918716_108919797_108920074_108920582
ENSMUSG00000025645.9_108918638_108921283_1	chr9	+	1051	3	NNC	ENSMUSG00000025645.9	novel	1173	3	NA	NA	63	-55	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTCCTGGCCACATTGC	NA	NA	NA	NA	NA	NA	NA	NA	108918637	108921283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108918716_108919797_108920074_108920586
ENSMUSG00000025645.9_108918654_108921267_1	chr9	+	1023	3	FSM	ENSMUSG00000025645.9	ENST00000442740.1	1173	3	79	71	79	-71	multi-exon	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGTCACCTGTGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	108918653	108921267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108918716_108919797_108920074_108920582
ENSMUSG00000025645.9_108918693_108921329_1	chr9	+	1046	3	FSM	ENSMUSG00000025645.9	ENST00000442740.1	1173	3	118	9	118	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAACCCTGGGGACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	108918692	108921329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108918716_108919797_108920074_108920582
ENSMUSG00000025645.9_108919796_108921338_1	chr9	+	1028	2	NNC	ENSMUSG00000025645.9	novel	1173	3	NA	NA	1221	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACCTTCTTCAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	108919795	108921338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108920074_108920588
ENSMUSG00000025646.10_108889511_108894283_1	chr9	-	468	5	ISM	ENSMUSG00000025646.10	ENSMUST00000045011.9	2572	13	8909	696	8837	-658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACCAGCAGAAGCAGACG	NA	NA	NA	NA	NA	NA	NA	NA	108894283	108889510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195
ENSMUSG00000025646.10_108894719_108896907_1	chr9	-	465	4	ISM	ENSMUSG00000025646.10	ENSMUST00000161521.8	2381	12	6213	5866	6213	-5866	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGAGTCTTCCCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	108896907	108894718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108894868_108895033_108895161_108896084_108896187_108896820
ENSMUSG00000025646.10_108896125_108900869_1	chr9	-	423	4	ISM	ENSMUSG00000025646.10	ENSMUST00000161521.8	2381	12	2251	7272	2251	-7272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGGCTGATGGCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	108900869	108896124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108896187_108896820_108896979_108898346_108898466_108900785
ENSMUSG00000025646.10_108898425_108902909_1	chr9	-	430	4	ISM	ENSMUSG00000025646.10	ENSMUST00000161521.8	2381	12	211	9572	211	-9572	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAATGAGTTAAGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	108902909	108898424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108898466_108900785_108900957_108901674_108901806_108902822
ENSMUSG00000025647.17_108867670_108886415_1	chr9	+	1437	6	NNC	ENSMUSG00000025647.17	novel	1910	6	NA	NA	17	140	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTTAGCCAAACATTT	NA	NA	NA	NA	NA	NA	NA	NA	108867669	108886415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108867833_108869937_108870089_108880431_108880522_108885045_108885162_108885354_108885574_108885717
ENSMUSG00000025647.17_108867670_108886415_2	chr9	+	1443	6	FSM	ENSMUSG00000025647.17	ENSMUST00000112059.10	1910	6	37	430	17	140	multi-exon	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTTAGCCAAACATTT	NA	NA	NA	NA	NA	NA	NA	NA	108867669	108886415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108867833_108869937_108870095_108880431_108880522_108885045_108885162_108885354_108885574_108885717
ENSMUSG00000025647.17_108869937_108886508_1	chr9	+	1371	5	ISM	ENSMUSG00000025647.17	ENSMUST00000197099.5	742	6	453	-697	453	233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACCTCCGACTGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	108869936	108886508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108870095_108880434_108880522_108885045_108885162_108885354_108885574_108885717
ENSMUSG00000025647.17_108880503_108886662_1	chr9	+	1299	4	FSM	ENSMUSG00000025647.17	ENSMUST00000200515.5	1005	4	276	-570	233	-130	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGATGTGAATACCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	108880502	108886662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108880522_108885045_108885162_108885354_108885574_108885717
ENSMUSG00000025647.17_108880503_108886792_1	chr9	+	1429	4	FSM	ENSMUSG00000025647.17	ENSMUST00000200515.5	1005	4	276	-700	233	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTCTTCAGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	108880502	108886792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108880522_108885045_108885162_108885354_108885574_108885717
ENSMUSG00000025647.17_108885008_108886792_1	chr9	+	1448	3	ISM	ENSMUSG00000025647.17	ENSMUST00000154184.5	1038	4	1077	-517	1077	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTCTTCAGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	108885007	108886792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108885162_108885354_108885574_108885717
ENSMUSG00000025648.19_108821084_108859457_1	chr9	+	1411	14	FSM	ENSMUSG00000025648.19	ENSMUST00000198140.5	3488	14	238	1839	102	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACCTCTGTCAGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	108821083	108859457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108821181_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108839516_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ENSMUSG00000025648.19_108827956_108854168_1	chr9	+	894	9	ISM	ENSMUSG00000025648.19	ENST00000416568.5	1493	14	6974	5290	6974	-5290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCCTGCGGGATCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	108827955	108854168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108839516_108839725_108840225_108840352_108854114
ENSMUSG00000025648.19_108828209_108859780_1	chr9	+	1492	12	ISM	ENSMUSG00000025648.19	ENSMUST00000051873.15	3316	14	7239	1516	7227	322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGATGGGGGCCAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	108828208	108859780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108839516_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ENSMUSG00000025648.19_108828226_108856629_1	chr9	+	854	9	ISM	ENSMUSG00000025648.19	ENST00000416568.5	1493	14	7244	2829	7244	-2829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGGAGAGGCAGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	108828225	108856629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108839516_108839725_108840225_108840352_108854114_108854220_108856587
ENSMUSG00000025648.19_108836351_108856877_1	chr9	+	889	8	ISM	ENSMUSG00000025648.19	ENST00000416568.5	1493	14	15369	2581	15369	-2581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGAGCTTCCTGCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	108836350	108856877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108836427_108836759_108836817_108837416_108837539_108839516_108839725_108840225_108840352_108854114_108854220_108856587_108856718_108856812
ENSMUSG00000025648.19_108836758_108858026_1	chr9	+	878	8	ISM	ENSMUSG00000025648.19	ENST00000416568.5	1493	14	15776	1432	15776	-1432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCACTGGACTCCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	108836757	108858026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108836817_108837416_108837539_108839516_108839725_108840225_108840352_108854114_108854220_108856587_108856718_108856812_108856876_108857961
ENSMUSG00000025648.19_108837416_108859458_1	chr9	+	882	8	ISM	ENSMUSG00000025648.19	ENST00000416568.5	1493	14	16434	0	16434	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACCTCTGTCAGAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	108837415	108859458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108837539_108839516_108839725_108840225_108840352_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ENSMUSG00000025648.19_108837481_108856619_1	chr9	+	445	4	ISM	ENSMUSG00000025648.19	ENST00000383734.6	1409	13	16499	2839	16499	-2839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCATCATGGAACTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	108837480	108856619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108837539_108839516_108839725_108840225_108840373_108856587
ENSMUSG00000025648.19_108839542_108860095_1	chr9	+	1392	7	ISM	ENSMUSG00000025648.19	ENSMUST00000051873.15	3316	14	18572	1201	18560	637	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGATCCTGTAAAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	108839541	108860095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ENSMUSG00000025648.19_108839600_108860193_1	chr9	+	1432	7	ISM	ENSMUSG00000025648.19	ENSMUST00000051873.15	3316	14	18630	1103	18618	735	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTGTCCACACAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	108839599	108860193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ENSMUSG00000025648.19_108839613_108858012_1	chr9	+	503	5	ISM	ENSMUSG00000025648.19	ENST00000383734.6	1409	13	18631	1446	18631	-1446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACAGACCTCAGGTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	108839612	108858012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108839725_108840225_108840373_108856587_108856718_108856812_108856876_108857961
ENSMUSG00000025648.19_108840254_108859458_1	chr9	+	439	5	ISM	ENSMUSG00000025648.19	ENST00000383734.6	1409	13	19272	0	19272	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACCTCTGTCAGAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	108840253	108859458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108840373_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ENSMUSG00000025648.19_108840254_108860362_1	chr9	+	1448	6	ISM	ENSMUSG00000025648.19	ENSMUST00000051873.15	3316	14	19284	934	19272	904	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCCACTCTAGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	108840253	108860362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ENSMUSG00000025651.15_108765701_108778691_1	chr9	+	1646	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	108765700	108778691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108765856_108766083_108766225_108771158_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ENSMUSG00000025651.15_108765701_108778691_2	chr9	+	1644	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6950	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	108765700	108778691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773120_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ENSMUSG00000025651.15_108765701_108778691_3	chr9	+	1648	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8731	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	108765700	108778691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773952_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ENSMUSG00000025651.15_108765701_108778691_4	chr9	+	1648	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	108765700	108778691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776117_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ENSMUSG00000025656.18_94095525_94209625_1	chrX	-	2079	11	FSM	ENSMUSG00000025656.18	ENST00000637178.1	2115	11	0	36	0	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTTTTCGGAGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	94209625	94095524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_94095761_94098548_94098618_94102422_94102667_94114778_94114911_94121044_94121175_94125083_94125317_94144562_94144743_94155960_94156153_94174441_94174622_94175493_94175546_94209194
ENSMUSG00000025656.18_94098548_94210014_1	chrX	-	1929	10	NIC	ENSMUSG00000025656.18	novel	1946	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTGCCTTTACTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	94210014	94098547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chrX_-_94098618_94102422_94102667_94114778_94114911_94121044_94121175_94125083_94125317_94144562_94144743_94155960_94156153_94174441_94174622_94209198_94209577_94209824
ENSMUSG00000025656.18_94098548_94210014_2	chrX	-	1927	10	NNC	ENSMUSG00000025656.18	novel	1946	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTGCCTTTACTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	94210014	94098547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_94098618_94102422_94102667_94114778_94114911_94121044_94121175_94125083_94125317_94144562_94144743_94155960_94156153_94174447_94174622_94209194_94209577_94209824
ENSMUSG00000025656.18_94098548_94210014_3	chrX	-	1924	10	NNC	ENSMUSG00000025656.18	novel	1946	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTGCCTTTACTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	94210014	94098547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_94098618_94102422_94102667_94114778_94114911_94121044_94121166_94125083_94125317_94144562_94144743_94155960_94156153_94174441_94174622_94209194_94209577_94209824
ENSMUSG00000025656.18_94098548_94210014_4	chrX	-	1927	10	NNC	ENSMUSG00000025656.18	novel	1946	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTGCCTTTACTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	94210014	94098547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_94098618_94102422_94102667_94114778_94114905_94121044_94121175_94125083_94125317_94144562_94144743_94155960_94156153_94174441_94174622_94209194_94209577_94209824
ENSMUSG00000025656.18_94098548_94210014_5	chrX	-	1925	10	NNC	ENSMUSG00000025656.18	novel	1946	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTGCCTTTACTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	94210014	94098547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_94098610_94102422_94102667_94114778_94114911_94121044_94121175_94125083_94125317_94144562_94144743_94155960_94156153_94174441_94174622_94209194_94209577_94209824
ENSMUSG00000025658.17_156605543_156609434_1	chrX	-	1372	2	ISM	ENSMUSG00000025658.17	ENST00000644585.1	5141	21	216545	972	170246	-972	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGGGTTTCTCTACTA	NA	NA	NA	NA	NA	NA	NA	NA	156609434	156605542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156606833_156609352
ENSMUSG00000025658.17_156605581_156609503_1	chrX	-	1403	2	ISM	ENSMUSG00000025658.17	ENST00000644585.1	5141	21	216476	1010	170177	-1010	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAGAAGTTGCAGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	156609503	156605580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156606833_156609352
ENSMUSG00000025658.17_156605828_156636289_1	chrX	-	1401	3	ISM	ENSMUSG00000025658.17	ENST00000644585.1	5141	21	189690	1257	143391	-1257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTTTTTAAAACAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	156636289	156605827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156606833_156609352_156609550_156636090
ENSMUSG00000025658.17_156606000_156636460_1	chrX	-	1400	3	ISM	ENSMUSG00000025658.17	ENST00000644585.1	5141	21	189519	1429	143220	-1429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGATTGCAAACCCATGCG	NA	NA	NA	NA	NA	NA	NA	NA	156636460	156605999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156606833_156609352_156609550_156636090
ENSMUSG00000025658.17_156606209_156639640_1	chrX	-	1447	4	ISM	ENSMUSG00000025658.17	ENST00000644585.1	5141	21	186339	1638	140040	-1638	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAATTTAAACCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	156639640	156606208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156606833_156609352_156609550_156636090_156636632_156639555
ENSMUSG00000025658.17_156606627_156654803_1	chrX	-	1422	8	ISM	ENSMUSG00000025658.17	ENST00000644585.1	5141	21	171176	2056	124877	-2056	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGTAAGTGCACTCGG	NA	NA	NA	NA	NA	NA	NA	NA	156654803	156606626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156606833_156609352_156609550_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640
ENSMUSG00000025658.17_156615873_156639656_1	chrX	-	1839	3	ISM	ENSMUSG00000025658.17	ENST00000642501.1	6184	18	140024	2602	140024	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1000	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGATCTTTTTAGAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	156639656	156615872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156617070_156636090_156636632_156639555
ENSMUSG00000025658.17_156616225_156654686_1	chrX	-	1747	7	ISM	ENSMUSG00000025658.17	ENST00000642501.1	6184	18	124994	2954	124994	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	795	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTCCAATCTATAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	156654686	156616224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156617070_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640
ENSMUSG00000025658.17_156616272_156654741_1	chrX	-	1755	7	ISM	ENSMUSG00000025658.17	ENST00000642501.1	6184	18	124939	3001	124939	-318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGATGTTGCCTCATAAG	NA	NA	NA	NA	NA	NA	NA	NA	156654741	156616271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156617070_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640
ENSMUSG00000025658.17_156616471_156671457_1	chrX	-	1741	9	ISM	ENSMUSG00000025658.17	ENST00000642501.1	6184	18	108223	3200	108223	-517	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAAGTGTAATCTATTA	NA	NA	NA	NA	NA	NA	NA	NA	156671457	156616470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156617070_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393
ENSMUSG00000025658.17_156616522_156671515_1	chrX	-	1748	9	ISM	ENSMUSG00000025658.17	ENST00000642501.1	6184	18	108165	3251	108165	-568	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTAAGTGTATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	156671515	156616521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156617070_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393
ENSMUSG00000025658.17_156616556_156671583_1	chrX	-	1782	9	ISM	ENSMUSG00000025658.17	ENST00000642501.1	6184	18	108097	3285	108097	-602	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAACGGTTAAGGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	156671583	156616555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156617070_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393
ENSMUSG00000025658.17_156616690_156689731_1	chrX	-	1739	10	ISM	ENSMUSG00000025658.17	ENST00000642501.1	6184	18	89949	3419	89949	-736	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGGTAAAAGGGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	156689731	156616689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156617070_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665
ENSMUSG00000025658.17_156616724_156689798_1	chrX	-	1772	10	ISM	ENSMUSG00000025658.17	ENST00000642501.1	6184	18	89882	3453	89882	-770	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGTAGCCGAAAACTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	156689798	156616723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156617070_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665
ENSMUSG00000025658.17_156616758_156689869_1	chrX	-	1809	10	ISM	ENSMUSG00000025658.17	ENST00000642501.1	6184	18	89811	3487	89811	-804	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGCATAAGATCAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	156689869	156616757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156617070_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665
ENSMUSG00000025658.17_156616870_156693145_1	chrX	-	1738	11	ISM	ENSMUSG00000025658.17	ENST00000642501.1	6184	18	86535	3599	86535	-916	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACTTGTAAAAAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	156693145	156616869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156617070_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112
ENSMUSG00000025658.17_156617004_156702812_1	chrX	-	1776	12	ISM	ENSMUSG00000025658.17	ENST00000279451.9	4195	20	123426	1131	76868	-1050	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCATTGGAATCACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	156702812	156617003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156617070_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156702741
ENSMUSG00000025658.17_156636100_156689756_1	chrX	-	1465	10	ISM	ENSMUSG00000025658.17	ENSMUST00000112513.2	4471	21	136534	20361	89924	-20146	internal_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAAAAGTAAGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	156689756	156636099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156673078_156673169_156689665
ENSMUSG00000025658.17_156636185_156689792_1	chrX	-	1416	10	ISM	ENSMUSG00000025658.17	ENSMUST00000112513.2	4471	21	136498	20446	89888	-20231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGACCCACAAGATGACAT	NA	NA	NA	NA	NA	NA	NA	NA	156689792	156636184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156673078_156673169_156689665
ENSMUSG00000025658.17_156636293_156728326_1	chrX	-	1747	14	ISM	ENSMUSG00000025658.17	ENST00000279451.9	4195	20	97912	20420	51354	-20339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGAGAGGATGCAAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	156728326	156636292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292
ENSMUSG00000025658.17_156636320_156693176_1	chrX	-	1430	11	ISM	ENSMUSG00000025658.17	ENSMUST00000112513.2	4471	21	133114	20581	86504	-20366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGCCCATACCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	156693176	156636319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156673078_156673169_156689665_156689878_156693112
ENSMUSG00000025658.17_156636573_156776784_1	chrX	-	1741	17	ISM	ENSMUSG00000025658.17	ENST00000279451.9	4195	20	49454	20700	2896	-20619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGTCTCAGTCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	156776784	156636572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726
ENSMUSG00000025658.17_156636613_156776845_1	chrX	-	1762	17	ISM	ENSMUSG00000025658.17	ENST00000279451.9	4195	20	49393	20740	2835	-20659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTGGAAGCAAAACACAGC	NA	NA	NA	NA	NA	NA	NA	NA	156776845	156636612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726
ENSMUSG00000025658.17_156639618_156702805_1	chrX	-	539	7	ISM	ENSMUSG00000025658.17	ENST00000645074.1	3294	17	123174	23664	76875	-23664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATCGACACCAAAACAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	156702805	156639617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156702741
ENSMUSG00000025658.17_156643565_156779573_1	chrX	-	1783	16	ISM	ENSMUSG00000025658.17	ENST00000279451.9	4195	20	46665	27692	107	-27611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGAAATACCTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	156779573	156643564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516
ENSMUSG00000025658.17_156648824_156779682_1	chrX	-	1826	15	ISM	ENSMUSG00000025658.17	ENST00000279451.9	4195	20	46556	32951	-2	-32870	internal_fragment	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCGACATCTCAAGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	156779682	156648823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516
ENSMUSG00000025658.17_156649587_156723052_1	chrX	-	573	6	ISM	ENSMUSG00000025658.17	ENST00000645074.1	3294	17	102927	33633	56628	-33633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTAATCTTACATGGG	NA	NA	NA	NA	NA	NA	NA	NA	156723052	156649586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156649661_156654640_156654814_156655100_156655150_156702741_156702889_156717635_156717705_156722991
ENSMUSG00000025658.17_156649644_156825833_1	chrX	-	1754	15	ISM	ENSMUSG00000025658.17	ENST00000279451.9	4195	20	405	33771	107	-33690	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATCAGTCTGCCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	156825833	156649643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ENSMUSG00000025658.17_156654757_156779575_1	chrX	-	1398	13	ISM	ENSMUSG00000025658.17	ENST00000644585.1	5141	21	46404	50186	105	-38803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGGATGGCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	156779575	156654756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156654814_156655100_156655150_156671393_156671609_156673078_156673169_156689665_156689878_156693112_156693247_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516
ENSMUSG00000025658.17_156654762_156825991_1	chrX	-	1774	14	ISM	ENSMUSG00000025658.17	ENST00000279451.9	4195	20	247	38889	-12	-38808	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTGTGAAGGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	156825991	156654761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ENSMUSG00000025658.17_156671479_156825858_1	chrX	-	1398	12	ISM	ENSMUSG00000025658.17	ENST00000644585.1	5141	21	121	66908	82	-55525	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCATTGCTGCCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	156825858	156671478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156671609_156673078_156673169_156689665_156689878_156693112_156693247_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ENSMUSG00000025658.17_156671516_156826176_1	chrX	-	1736	12	ISM	ENSMUSG00000025658.17	ENST00000279451.9	4195	20	62	55643	62	-55562	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAAGAAGGGTGATAAG	NA	NA	NA	NA	NA	NA	NA	NA	156826176	156671515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156671609_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ENSMUSG00000025658.17_156671527_156825923_1	chrX	-	1415	12	ISM	ENSMUSG00000025658.17	ENST00000644585.1	5141	21	56	66956	17	-55573	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGGAAGAAGTCAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	156825923	156671526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156671609_156673078_156673169_156689665_156689878_156693112_156693247_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ENSMUSG00000025665.17_110297889_110348966_1	chrX	-	3682	20	ISM	ENSMUSG00000025665.17	ENSMUST00000096348.10	4151	23	23926	0	7023	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	110348966	110297888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849
ENSMUSG00000025665.17_110297889_110348967_1	chrX	-	3686	20	NNC	ENSMUSG00000025665.17	novel	3699	21	NA	NA	7022	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	110348967	110297888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_110299609_110300774_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319035_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849
ENSMUSG00000025665.17_110297889_110348967_2	chrX	-	3686	20	NNC	ENSMUSG00000025665.17	novel	3699	21	NA	NA	7022	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	110348967	110297888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_110299609_110300774_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319552_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849
ENSMUSG00000025665.17_110297889_110348967_5	chrX	-	3686	20	NNC	ENSMUSG00000025665.17	novel	3699	21	NA	NA	7022	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	110348967	110297888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_110299609_110300774_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344089_110344883_110344966_110348849
ENSMUSG00000025665.17_110297889_110348967_6	chrX	-	3691	20	NNC	ENSMUSG00000025665.17	novel	3699	21	NA	NA	7022	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	110348967	110297888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_110299609_110300774_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331367_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849
ENSMUSG00000025665.17_110297889_110355972_1	chrX	-	3736	21	FSM	ENSMUSG00000025665.17	ENST00000262752.5	3699	21	17	-54	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	110355972	110297888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_110299609_110300774_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927
ENSMUSG00000025666.17_80114586_80139426_1	chrX	+	1691	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	264	2052	264	89	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGGCTGCTATTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	80114585	80139426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_80114767_80127896_80128038_80138057
ENSMUSG00000025666.17_80127918_80139689_1	chrX	+	1752	2	ISM	ENSMUSG00000025666.17	ENSMUST00000171953.8	1801	4	13607	-352	13596	352	intron_retention	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTTAATTCTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	80127917	80139689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_80128038_80138057
ENSMUSG00000025701.13_116387237_116389486_1	chr6	-	689	2	ISM	ENSMUSG00000025701.13	ENSMUST00000026795.13	2821	14	48653	199	48499	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTCATACCACATGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	116389486	116387236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_116387860_116389420
ENSMUSG00000025701.13_116387339_116389530_1	chr6	-	631	2	ISM	ENSMUSG00000025701.13	ENSMUST00000170186.2	1929	14	48455	-341	48455	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTCTATTTATGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	116389530	116387338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_116387860_116389420
ENSMUSG00000025701.13_116387389_116389593_1	chr6	-	644	2	ISM	ENSMUSG00000025701.13	ENSMUST00000170186.2	1929	14	48392	-291	48392	291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCGGTAGCATCAGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	116389593	116387388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_116387860_116389420
ENSMUSG00000025701.13_116387568_116390524_1	chr6	-	686	4	ISM	ENSMUSG00000025701.13	ENSMUST00000170186.2	1929	14	47461	-112	47461	112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCGAAGTGCTGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	116390524	116387567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_116387860_116389420_116389592_116390082_116390184_116390402
ENSMUSG00000025701.13_116387680_116390787_1	chr6	-	663	5	ISM	ENSMUSG00000025701.13	ENSMUST00000170186.2	1929	14	47198	0	47198	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTGCCTCCCTACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	116390787	116387679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_116387860_116389420_116389592_116390082_116390184_116390402_116390525_116390698
ENSMUSG00000025701.13_116387680_116390844_1	chr6	-	720	5	ISM	ENSMUSG00000025701.13	ENSMUST00000170186.2	1929	14	47141	0	47141	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTGCCTCCCTACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	116390844	116387679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_116387860_116389420_116389592_116390082_116390184_116390402_116390525_116390698
ENSMUSG00000025701.13_116389421_116391570_1	chr6	-	660	5	ISM	ENSMUSG00000025701.13	ENSMUST00000026795.13	2821	14	46569	2383	46415	-1741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGACCAGGCACTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	116391570	116389420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_116389592_116390082_116390184_116390402_116390525_116390698_116390878_116391483
ENSMUSG00000025701.13_116389552_116392458_1	chr6	-	653	6	ISM	ENSMUSG00000025701.13	ENSMUST00000026795.13	2821	14	45681	2514	45527	-1872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGGCCCCACCACCCACG	NA	NA	NA	NA	NA	NA	NA	NA	116392458	116389551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_116389592_116390082_116390184_116390402_116390525_116390698_116390878_116391483_116391571_116392334
ENSMUSG00000025701.13_116390142_116397286_1	chr6	-	719	6	ISM	ENSMUSG00000025701.13	ENSMUST00000164547.8	1854	13	40699	2462	40699	-2462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGACGGTGGTGATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	116397286	116390141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_116390184_116390402_116390525_116390698_116390878_116391483_116391571_116392334_116392539_116397201
ENSMUSG00000025701.13_116390739_116400177_1	chr6	-	651	5	ISM	ENSMUSG00000025701.13	ENSMUST00000164547.8	1854	13	37808	3059	37808	-3059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGTGATGATGGACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	116400177	116390738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_116390878_116391483_116391571_116392334_116392539_116397201_116397349_116400103
ENSMUSG00000025701.13_116390847_116400276_1	chr6	-	642	5	ISM	ENSMUSG00000025701.13	ENSMUST00000164547.8	1854	13	37709	3167	37709	-3167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTGCAGAGGGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	116400276	116390846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_116390878_116391483_116391571_116392334_116392539_116397201_116397349_116400103
ENSMUSG00000025701.13_116397235_116431181_1	chr6	-	703	6	ISM	ENSMUSG00000025701.13	ENSMUST00000164547.8	1854	13	6804	9555	6804	-9555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCCAACAAGATTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	116431181	116397234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_116397349_116400103_116400277_116401097_116401205_116404103_116404227_116425230_116425313_116431077
ENSMUSG00000025701.13_116397302_116431230_1	chr6	-	685	6	ISM	ENSMUSG00000025701.13	ENSMUST00000164547.8	1854	13	6755	9622	6755	-9622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAACAAAACTGACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	116431230	116397301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_116397349_116400103_116400277_116401097_116401205_116404103_116404227_116425230_116425313_116431077
ENSMUSG00000025701.13_116400254_116437985_1	chr6	-	684	6	ISM	ENSMUSG00000025701.13	ENSMUST00000164547.8	1854	13	0	12574	0	-12574	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACCTCATGTTTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	116437985	116400253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_116400277_116401097_116401205_116404103_116404227_116425230_116425313_116431077_116431277_116437835
ENSMUSG00000025701.13_116404111_116438092_1	chr6	-	654	4	ISM	ENSMUSG00000025701.13	ENSMUST00000164547.8	1854	13	-107	16431	47	-16431	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGCGTAAGTTTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	116438092	116404110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_116404227_116425230_116425313_116431077_116431277_116437835
ENSMUSG00000025724.13_80565125_80572968_1	chr7	-	744	4	ISM	ENSMUSG00000025724.13	ENST00000560266.5	1057	7	24234	0	24234	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTTCCCTGAATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	80572968	80565124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80565653_80565922_80565981_80572094_80572133_80572848
ENSMUSG00000025724.13_80565125_80597261_1	chr7	-	1015	5	NNC	ENSMUSG00000025724.13	novel	1345	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTTCCCTGAATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	80597261	80565124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_80565653_80572848_80572964_80577484_80577635_80584774_80584885_80597149
ENSMUSG00000025724.13_80565125_80597261_2	chr7	-	1020	5	FSM	ENSMUSG00000025724.13	ENST00000558134.5	961	5	-59	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTTCCCTGAATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	80597261	80565124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_80565653_80572848_80572969_80577484_80577635_80584774_80584885_80597149
ENSMUSG00000025724.13_80565125_80597261_3	chr7	-	1014	5	NNC	ENSMUSG00000025724.13	novel	1345	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTTCCCTGAATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	80597261	80565124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_80565653_80572848_80572969_80577484_80577629_80584774_80584885_80597149
ENSMUSG00000025724.13_80565125_80597339_1	chr7	-	1006	5	FSM	ENSMUSG00000025724.13	ENST00000559729.5	1012	5	0	6	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTTCCCTGAATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	80597339	80565124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80584774_80584885_80597149
ENSMUSG00000025724.13_80565314_80577634_1	chr7	-	667	4	ISM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	19894	189	19568	95	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCCAGTGTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	80577634	80565313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484
ENSMUSG00000025724.13_80565314_80577634_2	chr7	-	705	5	ISM	ENSMUSG00000025724.13	ENST00000560266.5	1057	7	19568	189	19568	95	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCCAGTGTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	80577634	80565313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80565653_80565922_80565981_80572094_80572133_80572848_80572969_80577484
ENSMUSG00000025724.13_80565511_80597261_1	chr7	-	692	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	267	386	0	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACACACGTTGGCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	80597261	80565510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
ENSMUSG00000025724.13_80572847_80597490_1	chr7	-	723	4	ISM	ENSMUSG00000025724.13	ENSMUST00000119980.2	903	5	38	7010	38	-7010	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTACCCAAGGGAATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	80597490	80572846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80572969_80577484_80577635_80584774_80584885_80597149
ENSMUSG00000025726.12_80765350_80818958_1	chr7	+	1245	13	FSM	ENSMUSG00000025726.12	ENST00000538177.5	1360	13	65	50	65	-50	multi-exon	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGAACCAAACTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	80765349	80818958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_80765383_80766232_80766322_80767348_80767441_80771794_80771979_80774615_80774758_80775908_80776023_80777459_80777538_80787909_80787991_80791711_80791793_80803147_80803274_80817713_80817796_80818711_80818811_80818914
ENSMUSG00000025726.12_80766232_80819008_1	chr7	+	1258	12	NNC	ENSMUSG00000025726.12	novel	1360	13	NA	NA	947	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCCAAGTCTTCCAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	80766231	80819008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_80766322_80767348_80767441_80771794_80771979_80774615_80774758_80775908_80776023_80777459_80777538_80787909_80787991_80791711_80791793_80803147_80803274_80817718_80817796_80818711_80818811_80818914
ENSMUSG00000025726.12_80767348_80819008_1	chr7	+	1167	11	NNC	ENSMUSG00000025726.12	novel	1360	13	NA	NA	2063	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCCAAGTCTTCCAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	80767347	80819008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_80767441_80771794_80771979_80774615_80774758_80775908_80776023_80777459_80777538_80787909_80787991_80791711_80791793_80803147_80803274_80817720_80817796_80818711_80818811_80818914
ENSMUSG00000025728.17_26145426_26149529_1	chr17	-	1402	3	ISM	ENSMUSG00000025728.17	ENSMUST00000097368.10	3233	12	11380	24	11339	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAATAAAAATCTCATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	26149529	26145425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26146731_26147764_26147827_26149494
ENSMUSG00000025728.17_26145426_26149570_1	chr17	-	1443	3	ISM	ENSMUSG00000025728.17	ENSMUST00000097368.10	3233	12	11339	24	11298	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAATAAAAATCTCATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	26149570	26145425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26146731_26147764_26147827_26149494
ENSMUSG00000025728.17_26145656_26150525_1	chr17	-	1423	5	ISM	ENSMUSG00000025728.17	ENSMUST00000097368.10	3233	12	10384	254	10343	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACACTTAGTGGGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	26150525	26145655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435
ENSMUSG00000025728.17_26146078_26153838_1	chr17	-	1411	8	ISM	ENSMUSG00000025728.17	ENSMUST00000026823.16	3173	11	7184	683	7030	-652	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATATGCTGGCAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	26153838	26146077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731
ENSMUSG00000025728.17_26149495_26156241_1	chr17	-	1346	8	ISM	ENSMUSG00000025728.17	ENSMUST00000208071.2	2926	10	4627	4069	4627	3475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTTGGGTGCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	26156241	26149494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737
ENSMUSG00000025728.17_26149554_26156305_1	chr17	-	1351	8	ISM	ENSMUSG00000025728.17	ENSMUST00000208071.2	2926	10	4563	4128	4563	3416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCCCTGCCACTATACT	NA	NA	NA	NA	NA	NA	NA	NA	26156305	26149553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737
ENSMUSG00000025728.17_26149932_26156436_1	chr17	-	1426	7	ISM	ENSMUSG00000025728.17	ENSMUST00000208071.2	2926	10	4432	4506	4432	3038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCCAGTACCTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	26156436	26149931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737
ENSMUSG00000025728.17_26150499_26160857_1	chr17	-	1351	7	ISM	ENSMUSG00000025728.17	ENSMUST00000208071.2	2926	10	11	5073	11	2471	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGGGAAGAAGTGGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	26160857	26150498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ENSMUSG00000025728.17_26150719_26161022_1	chr17	-	1396	6	ISM	ENSMUSG00000025728.17	ENSMUST00000026823.16	3173	11	0	5324	0	2251	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCATCTTTTCGGATAT	NA	NA	NA	NA	NA	NA	NA	NA	26161022	26150718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ENSMUSG00000025731.17_26094504_26095971_1	chr17	+	555	5	FSM	ENSMUSG00000025731.17	ENST00000614890.4	552	5	3	-6	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCTGTCAAAAGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	26094503	26095971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26094701_26094933_26095097_26095468_26095537_26095634_26095714_26095923
ENSMUSG00000025731.17_26094504_26095971_2	chr17	+	547	5	FSM	ENSMUSG00000025731.17	ENST00000397666.6	544	5	3	-6	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCTGTCAAAAGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	26094503	26095971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095634_26095714_26095923
ENSMUSG00000025731.17_26094930_26095971_1	chr17	+	294	3	ISM	ENSMUSG00000025731.17	ENST00000397665.6	481	4	426	-6	426	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCTGTCAAAAGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	26094929	26095971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26095097_26095634_26095714_26095923
ENSMUSG00000025737.6_26043252_26044697_1	chr17	+	479	2	ISM	ENSMUSG00000025737.6	ENSMUST00000026833.6	3099	9	651	3007	130	-2861	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGCAACGTACAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	26043251	26044697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26043661_26044627
ENSMUSG00000025737.6_26045465_26046506_1	chr17	+	480	4	ISM	ENSMUSG00000025737.6	ENST00000647644.1	2684	9	2343	1052	2343	-1052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTAGGGGCTGGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	26045464	26046506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_26045599_26046008_26046128_26046208_26046331_26046401
ENSMUSG00000025742.6_166129318_166165706_1	chrX	-	3660	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	39	0	39	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTTGTCATCCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	166165706	166129317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ENSMUSG00000025742.6_166131696_166165536_1	chrX	-	1121	7	FSM	ENSMUSG00000025742.6	ENST00000398491.6	1217	7	55	41	55	-41	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTTATTTGGTCGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	166165536	166131695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156989_166157183_166165465
ENSMUSG00000025742.6_166131756_166165588_1	chrX	-	1113	7	FSM	ENSMUSG00000025742.6	ENST00000398491.6	1217	7	3	101	3	-101	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCCTTCTAAAGCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	166165588	166131755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156989_166157183_166165465
ENSMUSG00000025743.15_130519848_130546370_1	chr4	+	862	3	ISM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	0	7260	0	-7260	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCCGACACCTAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	130519847	130546370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_130520114_130544155_130544274_130545892
ENSMUSG00000025743.15_130546078_130550029_1	chr4	+	803	3	ISM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	26230	3601	26230	-3601	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGACGAAGGCAGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	130546077	130550029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_130546516_130548678_130548968_130549953
ENSMUSG00000025743.15_130546183_130550123_1	chr4	+	792	3	ISM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	26335	3507	26335	-3507	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACAGTGCCTCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	130546182	130550123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_130546516_130548678_130548968_130549953
ENSMUSG00000025743.15_130546343_130550315_1	chr4	+	824	3	ISM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	26495	3315	26495	-3315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGACCCCTTCTTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	130546342	130550315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_130546516_130548678_130548968_130549953
ENSMUSG00000025743.15_130548740_130550525_1	chr4	+	800	2	ISM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	28892	3105	28892	-3105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAATTCAAAATCACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	130548739	130550525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_130548968_130549953
ENSMUSG00000025743.15_130548888_130550647_1	chr4	+	774	2	ISM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	29040	2983	29040	-2983	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAATGCACAGGTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	130548887	130550647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_130548968_130549953
ENSMUSG00000025745.13_30323302_30325704_1	chr5	-	1822	3	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	34456	0	34456	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGCACAGCCTAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	30325704	30323301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30324959_30325042_30325189_30325685
ENSMUSG00000025745.13_30323302_30325757_1	chr5	-	1875	3	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	34403	0	34403	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGCACAGCCTAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	30325757	30323301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30324959_30325042_30325189_30325685
ENSMUSG00000025745.13_30323463_30326394_1	chr5	-	1816	4	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	33766	161	33766	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTAGAGTCCTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	30326394	30323462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335
ENSMUSG00000025745.13_30323530_30326430_1	chr5	-	1785	4	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	33730	228	33730	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATTGCGAGAGGATAGG	NA	NA	NA	NA	NA	NA	NA	NA	30326430	30323529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335
ENSMUSG00000025745.13_30323560_30326513_1	chr5	-	1838	4	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	33647	258	33647	-258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAAGGAACCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	30326513	30323559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335
ENSMUSG00000025745.13_30323752_30327677_1	chr5	-	1792	6	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	32483	450	32483	-450	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATCACATGCACAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	30327677	30323751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618
ENSMUSG00000025745.13_30323782_30327750_1	chr5	-	1835	6	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	32410	480	32410	-480	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTTCAGATGGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	30327750	30323781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618
ENSMUSG00000025745.13_30323899_30328661_1	chr5	-	1783	7	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	31499	597	31499	-597	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGGAAGTGCTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	30328661	30323898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605
ENSMUSG00000025745.13_30324014_30331634_1	chr5	-	1771	8	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	28526	712	28526	-712	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAAGCAGGGCCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	30331634	30324013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562
ENSMUSG00000025745.13_30324160_30333855_1	chr5	-	1783	9	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	26305	858	26305	-858	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGCCATTGTACACGT	NA	NA	NA	NA	NA	NA	NA	NA	30333855	30324159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797
ENSMUSG00000025745.13_30324219_30333900_1	chr5	-	1769	9	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	26260	917	26260	-917	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTAGAGGTGTGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	30333900	30324218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797
ENSMUSG00000025745.13_30324295_30333932_1	chr5	-	1725	9	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	26228	993	26228	-993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGACTCTGTGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	30333932	30324294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797
ENSMUSG00000025745.13_30324424_30339174_1	chr5	-	1882	12	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	20986	1122	20986	-1122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGGCCTGTTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30339174	30324423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055
ENSMUSG00000025745.13_30324566_30340040_1	chr5	-	1804	13	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	20120	1264	20120	-1264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAATCAACAGCTAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	30340040	30324565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976
ENSMUSG00000025745.13_30324689_30346025_1	chr5	-	1819	14	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	14135	1387	14135	-1387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGAGTGCCTTCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	30346025	30324688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946
ENSMUSG00000025745.13_30324897_30349195_1	chr5	-	1794	16	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	10965	1595	10965	-1595	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTGCCTATGGAACACA	NA	NA	NA	NA	NA	NA	NA	NA	30349195	30324896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156
ENSMUSG00000025745.13_30325130_30350299_1	chr5	-	1812	16	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	9861	1828	9861	-1828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCCTACAGGAAGGGATC	NA	NA	NA	NA	NA	NA	NA	NA	30350299	30325129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232
ENSMUSG00000025745.13_30326467_30359960_1	chr5	-	1768	17	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	200	3165	200	-3165	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGCTGGCAGACGAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	30359960	30326466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
ENSMUSG00000025745.13_30327618_30360160_1	chr5	-	1835	15	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	0	4316	0	-4316	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGTCAGAAGCAGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	30360160	30327617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
ENSMUSG00000025747.13_30266062_30268297_1	chr5	-	206	3	ISM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	10318	2237	10318	-2237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGAAGACTTTCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	30268297	30266061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30266132_30266965_30267038_30268233
ENSMUSG00000025757.14_40707626_40714855_1	chr3	+	280	3	ISM	ENSMUSG00000025757.14	ENSMUST00000108086.7	2744	19	7326	29164	7326	-29164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTAAACTGTCTGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	40707625	40714855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_40707723_40711432_40711556_40714795
ENSMUSG00000025758.11_40754454_40765819_1	chr3	+	2310	9	ISM	ENSMUSG00000025758.11	ENST00000513090.5	3066	15	-39	5122	0	-5033	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTCCTACGTGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	40754453	40765819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_40754719_40755434_40755531_40756392_40756508_40759442_40760455_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668
ENSMUSG00000025758.11_40754454_40770941_1	chr3	+	3201	16	FSM	ENSMUSG00000025758.11	ENST00000270861.10	3567	16	-3	369	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTCTATTAAACAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	40754453	40770941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760455_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ENSMUSG00000025758.11_40754689_40766620_1	chr3	+	2300	11	ISM	ENSMUSG00000025758.11	ENST00000513090.5	3066	15	196	4321	0	-4232	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGCTTAAGGTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	40754688	40766620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_40754719_40755434_40755531_40756392_40756508_40759442_40760455_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528
ENSMUSG00000025758.11_40755433_40771186_1	chr3	+	3183	15	ISM	ENSMUSG00000025758.11	ENST00000270861.10	3567	16	976	124	744	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTGTAAATAATGTATT	NA	NA	NA	NA	NA	NA	NA	NA	40755432	40771186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_40755531_40756219_40756316_40756392_40756508_40759442_40760455_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ENSMUSG00000025758.11_40755476_40767219_1	chr3	+	2283	11	ISM	ENSMUSG00000025758.11	ENST00000513090.5	3066	15	983	3722	787	-3633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGCTGTAAGGGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	40755475	40767219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_40755531_40756392_40756508_40759442_40760455_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165
ENSMUSG00000025758.11_40756219_40771318_1	chr3	+	3218	14	ISM	ENSMUSG00000025758.11	ENST00000270861.10	3567	16	1762	-8	1530	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTTATTGGCTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	40756218	40771318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_40756316_40756392_40756508_40759442_40760455_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ENSMUSG00000025758.11_40759553_40769490_1	chr3	+	2294	11	ISM	ENSMUSG00000025758.11	ENST00000513090.5	3066	15	5060	1451	4864	-1362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTACACATCACCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	40759552	40769490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_40760455_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416
ENSMUSG00000025758.11_40759796_40770941_1	chr3	+	2276	12	ISM	ENSMUSG00000025758.11	ENST00000513090.5	3066	15	5303	0	5107	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTCTATTAAACAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	40759795	40770941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_40760455_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ENSMUSG00000025758.11_40767901_40771318_1	chr3	+	802	3	ISM	ENSMUSG00000025758.11	ENSMUST00000203295.3	3363	16	13412	0	13212	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTTATTGGCTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	40767900	40771318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_40768027_40769416_40769524_40770749
ENSMUSG00000025759.12_40773943_40789712_1	chr3	-	1032	7	FSM	ENSMUSG00000025759.12	ENST00000641690.1	1160	7	134	-6	134	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTGCTGTCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	40789712	40773942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40788378_40788493_40789603
ENSMUSG00000025759.12_40773943_40789712_2	chr3	-	918	6	FSM	ENSMUSG00000025759.12	ENST00000641147.1	1046	6	134	-6	134	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTGCTGTCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	40789712	40773942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40789603
ENSMUSG00000025759.12_40773943_40789792_1	chr3	-	998	6	FSM	ENSMUSG00000025759.12	ENST00000641147.1	1046	6	54	-6	54	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTGCTGTCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	40789792	40773942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40789603
ENSMUSG00000025759.12_40773943_40789792_2	chr3	-	1112	7	FSM	ENSMUSG00000025759.12	ENST00000641690.1	1160	7	54	-6	54	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTGCTGTCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	40789792	40773942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40788378_40788493_40789603
ENSMUSG00000025759.12_40776426_40789631_1	chr3	-	697	7	ISM	ENSMUSG00000025759.12	ENST00000641186.1	1546	11	11609	2477	215	-2477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTACACCCCAGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	40789631	40776425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40789603
ENSMUSG00000025759.12_40776480_40789678_1	chr3	-	690	7	ISM	ENSMUSG00000025759.12	ENST00000641186.1	1546	11	11562	2531	168	-2531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAGAAGATCACAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	40789678	40776479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40789603
ENSMUSG00000025759.12_40776531_40789728_1	chr3	-	689	7	ISM	ENSMUSG00000025759.12	ENST00000641186.1	1546	11	11512	2582	118	-2582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCCCTAATACTACATTT	NA	NA	NA	NA	NA	NA	NA	NA	40789728	40776530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40789603
ENSMUSG00000025759.12_40776630_40789846_1	chr3	-	792	6	ISM	ENSMUSG00000025759.12	ENST00000641186.1	1546	11	11394	2681	0	-2681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTGATTTCAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	40789846	40776629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40789603
ENSMUSG00000025759.12_40778349_40793884_1	chr3	-	679	7	ISM	ENSMUSG00000025759.12	ENST00000641186.1	1546	11	7356	4400	-4038	2947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGCTCTATGATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	40793884	40778348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40789603_40789845_40791523_40791568_40793848
ENSMUSG00000025759.12_40781368_40789662_1	chr3	-	424	5	ISM	ENSMUSG00000025759.12	ENSMUST00000026859.11	3151	12	11658	8830	184	-72	internal_fragment	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGGCTACCAATATTGT	NA	NA	NA	NA	NA	NA	NA	NA	40789662	40781367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603
ENSMUSG00000025759.12_40781368_40789792_1	chr3	-	409	4	FSM	ENSMUSG00000025759.12	ENST00000641134.1	535	4	54	72	54	-72	multi-exon	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGGCTACCAATATTGT	NA	NA	NA	NA	NA	NA	NA	NA	40789792	40781367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_40781418_40785058_40785115_40788378_40788493_40789603
ENSMUSG00000025759.12_40781368_40801129_1	chr3	-	682	7	ISM	ENSMUSG00000025759.12	ENST00000641186.1	1546	11	111	7419	111	-72	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGGCTACCAATATTGT	NA	NA	NA	NA	NA	NA	NA	NA	40801129	40781367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_40781418_40785058_40785115_40786447_40786593_40789603_40789845_40791523_40791568_40793848_40793941_40801075
ENSMUSG00000025759.12_40785059_40801237_1	chr3	-	740	6	ISM	ENSMUSG00000025759.12	ENST00000641186.1	1546	11	3	11110	3	-3763	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGTTAGCCTGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	40801237	40785058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_40785115_40786447_40786593_40789603_40789845_40791523_40791568_40793848_40793941_40801075
ENSMUSG00000025781.15_10060827_10085238_1	chr2	-	1058	9	NNC	ENSMUSG00000025781.15	novel	1060	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	4919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATTGTAACTTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	10085238	10060826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_10060967_10063802_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUSG00000025781.15_10060827_10085238_2	chr2	-	1054	9	NNC	ENSMUSG00000025781.15	novel	1060	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATTGTAACTTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	10085238	10060826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_10060973_10063806_10063904_10064311_10064468_10068096_10068162_10068259_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUSG00000025781.15_10060827_10085238_3	chr2	-	1054	9	NNC	ENSMUSG00000025781.15	novel	1060	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATTGTAACTTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	10085238	10060826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_10060967_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUSG00000025781.15_10060841_10073490_1	chr2	-	905	8	NNC	ENSMUSG00000025781.15	novel	1735	10	NA	NA	11748	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	10073490	10060840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_10060967_10061575_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420
ENSMUSG00000025781.15_10060841_10073501_1	chr2	-	917	8	ISM	ENSMUSG00000025781.15	ENSMUST00000114896.8	1735	10	11754	0	11737	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	10073501	10060840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420
ENSMUSG00000025781.15_10061575_10074538_1	chr2	-	877	8	ISM	ENSMUSG00000025781.15	ENSMUST00000114896.8	1735	10	10717	734	10700	-734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACACACTCTTTCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	10074538	10061574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503
ENSMUSG00000025781.15_10061575_10085238_1	chr2	-	957	9	ISM	ENSMUSG00000025781.15	ENSMUST00000114897.9	1166	10	83	734	0	-734	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACACACTCTTTCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	10085238	10061574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUSG00000025782.13_9919940_9926092_1	chr2	-	1675	3	ISM	ENSMUSG00000025782.13	ENSMUST00000114909.2	4897	5	32376	575	-2447	-575	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATCTGAAACGTAAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	9926092	9919939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_9921278_9922913_9923021_9925862
ENSMUSG00000025782.13_9920102_9956035_1	chr2	-	1727	5	FSM	ENSMUSG00000025782.13	ENSMUST00000114909.2	4897	5	2433	737	2433	-737	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTGTGTTTATATTGT	NA	NA	NA	NA	NA	NA	NA	NA	9956035	9920101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924
ENSMUSG00000025782.13_9920349_9956216_1	chr2	-	1661	5	FSM	ENSMUSG00000025782.13	ENSMUST00000114909.2	4897	5	2252	984	2252	538	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGTAATTGCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	9956216	9920348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924
ENSMUSG00000025782.13_9921047_9956943_1	chr2	-	1690	5	FSM	ENSMUSG00000025782.13	ENSMUST00000114909.2	4897	5	1525	1682	1525	-158	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATGGCACCCCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	9956943	9921046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924
ENSMUSG00000025782.13_9922934_9957175_1	chr2	-	1671	4	ISM	ENSMUSG00000025782.13	ENSMUST00000114909.2	4897	5	1293	3569	1293	-2045	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACGATTGGTACCACTG	NA	NA	NA	NA	NA	NA	NA	NA	9957175	9922933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_9923021_9925862_9926113_9945737_9945821_9955924
ENSMUSG00000025782.13_9956187_10047331_1	chr2	-	1664	2	ISM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	6076	36824	6076	-35298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATGGCACTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	10047331	9956186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_9957757_10047237
ENSMUSG00000025782.13_9956374_10053115_1	chr2	-	1696	3	ISM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	292	37011	292	-35485	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGATGCTGCGAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	10053115	9956373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_9957757_10047237_10047481_10053045
ENSMUSG00000025782.13_9956532_10053261_1	chr2	-	1684	3	ISM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	146	37169	146	-35643	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAGAGAGAGAAACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	10053261	9956531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_9957757_10047237_10047481_10053045
ENSMUSG00000025785.6_122942280_122965194_1	chr9	+	1047	8	NNC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTGTTAGCATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	122942279	122965194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_122942382_122947955_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ENSMUSG00000025785.6_122942280_122965194_2	chr9	+	1048	8	NNC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	984	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTGTTAGCATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	122942279	122965194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_122942388_122947955_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964968
ENSMUSG00000025785.6_122947954_122965194_1	chr9	+	938	7	NNC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	5674	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	831	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTGTTAGCATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	122947953	122965194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959900_122960016_122960949_122961106_122964963
ENSMUSG00000025786.18_122907227_122929435_1	chr9	-	762	6	FSM	ENSMUSG00000025786.18	ENST00000506315.1	960	6	198	0	198	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGACCAGCATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	122929435	122907226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_122907387_122909415_122909591_122912594_122912692_122913278_122913376_122918096_122918222_122929327
ENSMUSG00000025786.18_122907365_122929515_1	chr9	-	704	6	FSM	ENSMUSG00000025786.18	ENST00000506315.1	960	6	118	138	118	-138	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAGAAGATGGGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	122929515	122907364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_122907387_122909415_122909591_122912594_122912692_122913278_122913376_122918096_122918222_122929327
ENSMUSG00000025789.10_73592927_73610659_1	chr7	-	506	2	ISM	ENSMUSG00000025789.10	ENST00000539113.5	1089	5	52608	-1	52608	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGACAGCCCATGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	73610659	73592926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_73593213_73610439
ENSMUSG00000025789.10_73593098_73616529_1	chr7	-	450	3	ISM	ENSMUSG00000025789.10	ENST00000539113.5	1089	5	46738	170	46738	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGATCAGAATCAGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	73616529	73593097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_73593213_73610439_73610734_73616488
ENSMUSG00000025789.10_73593148_73616583_1	chr7	-	454	3	ISM	ENSMUSG00000025789.10	ENST00000539113.5	1089	5	46684	220	46684	-220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACGCTTCTGCAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	73616583	73593147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_73593213_73610439_73610734_73616488
ENSMUSG00000025789.10_73593185_73616647_1	chr7	-	481	3	ISM	ENSMUSG00000025789.10	ENST00000539113.5	1089	5	46620	257	46620	-257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACCAACCACCGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	73616647	73593184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_73593213_73610439_73610734_73616488
ENSMUSG00000025789.10_73610599_73621794_1	chr7	-	522	3	ISM	ENSMUSG00000025789.10	ENST00000539113.5	1089	5	41473	17671	41473	-17671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCTGCACGGCCTCAATG	NA	NA	NA	NA	NA	NA	NA	NA	73621794	73610598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_73610734_73616488_73616747_73621665
ENSMUSG00000025789.10_73610705_73663177_1	chr7	-	449	4	ISM	ENSMUSG00000025789.10	ENST00000539113.5	1089	5	90	17777	90	-17777	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGGATGTGGGCCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	73663177	73610704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_73610734_73616488_73616747_73621665_73621795_73663144
ENSMUSG00000025791.19_99786854_99824278_1	chr4	+	805	6	ISM	ENSMUSG00000025791.19	ENST00000650546.1	2102	11	98	20116	98	-20116	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGGTTCTTTGTGAATC	NA	NA	NA	NA	NA	NA	NA	NA	99786853	99824278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255
ENSMUSG00000025791.19_99786906_99824330_1	chr4	+	805	6	ISM	ENSMUSG00000025791.19	ENST00000650546.1	2102	11	150	20064	150	-20064	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCAGCATTCCGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	99786905	99824330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255
ENSMUSG00000025791.19_99786960_99824380_1	chr4	+	801	6	ISM	ENSMUSG00000025791.19	ENST00000650546.1	2102	11	204	20014	204	-20014	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGCCCACAAGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	99786959	99824380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255
ENSMUSG00000025791.19_99818652_99827299_1	chr4	+	899	6	ISM	ENSMUSG00000025791.19	ENSMUST00000102783.5	2523	11	5711	17192	5711	-17095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGGCACTCATGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	99818651	99827299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183
ENSMUSG00000025791.19_99818757_99836098_1	chr4	+	831	7	ISM	ENSMUSG00000025791.19	ENSMUST00000102783.5	2523	11	5816	8393	5816	-8296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGGCCTGGCTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	99818756	99836098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061
ENSMUSG00000025791.19_99819325_99839101_1	chr4	+	808	7	ISM	ENSMUSG00000025791.19	ENSMUST00000102783.5	2523	11	6384	5390	6384	-5293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTGAGGGTGCAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	99819324	99839101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080
ENSMUSG00000025791.19_99820709_99839264_1	chr4	+	914	6	ISM	ENSMUSG00000025791.19	ENSMUST00000102783.5	2523	11	7768	5227	7768	-5130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAGCCGATTGTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	99820708	99839264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080
ENSMUSG00000025791.19_99820750_99839204_1	chr4	+	808	6	NNC	ENSMUSG00000025791.19	novel	2371	11	NA	NA	7809	-5190	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGCGGATAACTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	99820749	99839204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_99820841_99821871_99822063_99824255_99824411_99827188_99827300_99836061_99836198_99839080
ENSMUSG00000025791.19_99821870_99841275_1	chr4	+	894	6	ISM	ENSMUSG00000025791.19	ENSMUST00000102783.5	2523	11	8929	3216	8929	-3119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCAAGATCAACCAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	99821869	99841275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165
ENSMUSG00000025791.19_99822007_99843935_1	chr4	+	819	7	ISM	ENSMUSG00000025791.19	ENST00000650546.1	2102	11	35251	459	9066	-459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGCGCCCACTGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	99822006	99843935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841274_99843871
ENSMUSG00000025791.19_99836130_99843925_1	chr4	+	441	4	ISM	ENSMUSG00000025791.19	ENSMUST00000102783.5	2523	11	23189	566	23189	-469	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACGGGTCGCACTGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	99836129	99843925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_99836198_99839080_99839265_99841165_99841301_99843871
ENSMUSG00000025791.19_99839164_99844071_1	chr4	+	436	3	ISM	ENSMUSG00000025791.19	ENSMUST00000102783.5	2523	11	26223	420	26223	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTACTTCCCACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	99839163	99844071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_99839265_99841165_99841301_99843871
ENSMUSG00000025791.19_99839218_99844120_1	chr4	+	431	3	ISM	ENSMUSG00000025791.19	ENSMUST00000102783.5	2523	11	26277	371	26277	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGGGGGAGAGGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	99839217	99844120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_99839265_99841165_99841301_99843871
ENSMUSG00000025792.10_120382741_120390013_2	chr11	+	1948	11	FSM	ENSMUSG00000025792.10	ENSMUST00000026899.4	2023	11	75	0	-68	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGGGGCTGGCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	120382740	120390013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387933_120388209_120388288_120388745_120388803_120388896
ENSMUSG00000025792.10_120385387_120388288_1	chr11	+	561	8	ISM	ENSMUSG00000025792.10	ENST00000331531.9	891	11	2578	704	2578	-704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGACTGGGCTGCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	120385386	120388288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387952_120388196
ENSMUSG00000025792.10_120385881_120388936_1	chr11	+	526	9	ISM	ENSMUSG00000025792.10	ENST00000331531.9	891	11	3072	56	3072	-56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCACTTTCATGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	120385880	120388936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387952_120388196_120388288_120388745_120388803_120388896
ENSMUSG00000025793.18_120358461_120374591_1	chr11	+	2686	22	FSM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	0	214	0	-214	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGTGCCACAGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	120358460	120374591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ENSMUSG00000025793.18_120358461_120374648_1	chr11	+	2743	22	FSM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	0	157	0	-157	multi-exon	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTAACTGTGTGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	120358460	120374648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ENSMUSG00000025793.18_120360426_120374805_1	chr11	+	2686	20	ISM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	1965	0	1965	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATGATTGATTGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	120360425	120374805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ENSMUSG00000025794.10_120400510_120403501_1	chr9	+	786	6	NNC	ENSMUSG00000025794.10	novel	1009	6	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGTGGACTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	120400509	120403501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_120400612_120401169_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ENSMUSG00000025794.10_120400510_120403501_2	chr9	+	790	6	FSM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	0	219	0	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	8253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGTGGACTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	120400509	120403501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ENSMUSG00000025794.10_120400622_120403501_1	chr9	+	785	6	FSM	ENSMUSG00000025794.10	ENST00000396203.7	815	6	39	-9	39	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	7095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGTGGACTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	120400621	120403501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_120400715_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ENSMUSG00000025794.10_120402655_120403720_1	chr9	+	701	3	ISM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	2145	0	1494	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACCATAGTCGAGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	120402654	120403720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120402742_120402829_120402884_120403160
ENSMUSG00000025809.16_129412135_129446613_1	chr8	+	1575	10	ISM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	0	13068	0	-13042	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGTATGACCGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	129412134	129446613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472
ENSMUSG00000025809.16_129412238_129446901_1	chr8	+	1618	11	ISM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	103	12780	103	-12754	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGTCCCAAGTGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	129412237	129446901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755
ENSMUSG00000025809.16_129412351_129446901_1	chr8	+	1505	11	ISM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	216	12780	216	-12754	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGTCCCAAGTGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	129412350	129446901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755
ENSMUSG00000025809.16_129431904_129448909_1	chr8	+	1504	11	ISM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	19769	10772	-1646	-10746	internal_fragment	TRUE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGTGAACAGTGAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	129431903	129448909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864
ENSMUSG00000025809.16_129436733_129449413_1	chr8	+	1679	10	ISM	ENSMUSG00000025809.16	ENST00000676659.1	3485	14	3183	10242	3183	-10242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGTGAATGTGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	129436732	129449413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290
ENSMUSG00000025809.16_129439725_129450707_1	chr8	+	1550	10	ISM	ENSMUSG00000025809.16	ENST00000676659.1	3485	14	6175	8948	6175	-8948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAAAAGAAAGACACGTG	NA	NA	NA	NA	NA	NA	NA	NA	129439724	129450707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676
ENSMUSG00000025809.16_129439778_129450757_1	chr8	+	1547	10	ISM	ENSMUSG00000025809.16	ENST00000676659.1	3485	14	6228	8898	6228	-8898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGTAGAAAGCAGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	129439777	129450757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676
ENSMUSG00000025809.16_129439837_129450816_1	chr8	+	1547	10	ISM	ENSMUSG00000025809.16	ENST00000676659.1	3485	14	6287	8839	6287	-8839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGGAGAAGGACATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	129439836	129450816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676
ENSMUSG00000025809.16_129440485_129452561_1	chr8	+	1601	10	ISM	ENSMUSG00000025809.16	ENST00000676659.1	3485	14	6935	7094	6935	-7094	internal_fragment	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGCCTTGCCTTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	129440484	129452561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500
ENSMUSG00000025809.16_129440566_129452585_1	chr8	+	1544	10	ISM	ENSMUSG00000025809.16	ENST00000676659.1	3485	14	7016	7070	7016	-7070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGAAACTTTTAATGATAA	NA	NA	NA	NA	NA	NA	NA	NA	129440565	129452585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500
ENSMUSG00000025809.16_129440589_129452667_1	chr8	+	1603	10	ISM	ENSMUSG00000025809.16	ENST00000676659.1	3485	14	7039	6988	7039	-6988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTATGAAACATTACT	NA	NA	NA	NA	NA	NA	NA	NA	129440588	129452667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500
ENSMUSG00000025809.16_129442643_129458524_1	chr8	+	1526	10	ISM	ENSMUSG00000025809.16	ENST00000678591.1	3472	14	9093	1195	9093	-1131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCGTGACAACTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	129442642	129458524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ENSMUSG00000025809.16_129442680_129458577_1	chr8	+	1623	11	ISM	ENSMUSG00000025809.16	ENST00000423113.5	3566	15	9130	1142	9130	-1078	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCGGATTTTGCAACACC	NA	NA	NA	NA	NA	NA	NA	NA	129442679	129458577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129453463_129453545_129458503
ENSMUSG00000025809.16_129442710_129458560_1	chr8	+	1495	10	ISM	ENSMUSG00000025809.16	ENST00000678591.1	3472	14	9160	1159	9160	-1095	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAATGAATCCTACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	129442709	129458560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ENSMUSG00000025809.16_129442741_129458634_1	chr8	+	1538	10	ISM	ENSMUSG00000025809.16	ENST00000678591.1	3472	14	9191	1085	9191	-1021	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGGGCTCTGTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	129442740	129458634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ENSMUSG00000025809.16_129443750_129458749_1	chr8	+	1573	9	ISM	ENSMUSG00000025809.16	ENST00000678591.1	3472	14	10200	970	10200	-906	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACAGAAGACTTGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	129443749	129458749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ENSMUSG00000025809.16_129446473_129458870_1	chr8	+	1570	7	ISM	ENSMUSG00000025809.16	ENST00000678591.1	3472	14	12923	849	12923	-785	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	860	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATGCAGGGCAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	129446472	129458870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ENSMUSG00000025809.16_129446804_129458992_1	chr8	+	1503	6	ISM	ENSMUSG00000025809.16	ENST00000678591.1	3472	14	13254	727	13254	-663	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTAGCCTGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	129446803	129458992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ENSMUSG00000025809.16_129446808_129459098_1	chr8	+	1686	7	ISM	ENSMUSG00000025809.16	ENST00000423113.5	3566	15	13258	621	13258	-557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCCATTGGAAAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	129446807	129459098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129453463_129453545_129458503
ENSMUSG00000025809.16_129446880_129458581_1	chr8	+	1080	6	ISM	ENSMUSG00000025809.16	ENST00000676659.1	3485	14	13330	1074	13330	-1074	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATTTTGCAACACCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	129446879	129458581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452732_129458503
ENSMUSG00000025809.16_129448897_129459199_1	chr8	+	1526	5	ISM	ENSMUSG00000025809.16	ENST00000678591.1	3472	14	15347	520	15347	-456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	829	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAATCCAACCTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	129448896	129459199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ENSMUSG00000025809.16_129448947_129459248_1	chr8	+	1606	6	ISM	ENSMUSG00000025809.16	ENST00000423113.5	3566	15	15397	471	15397	-407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTGACTTAGCACTATT	NA	NA	NA	NA	NA	NA	NA	NA	129448946	129459248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129453463_129453545_129458503
ENSMUSG00000025809.16_129448984_129458870_1	chr8	+	1174	5	ISM	ENSMUSG00000025809.16	ENST00000676659.1	3485	14	15434	785	15434	-785	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATGCAGGGCAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	129448983	129458870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129449104_129449290_129449514_129450676_129450910_129452500_129452732_129458503
ENSMUSG00000025809.16_129449055_129458870_1	chr8	+	1103	5	ISM	ENSMUSG00000025809.16	ENST00000676659.1	3485	14	15505	785	15505	-785	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATGCAGGGCAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	129449054	129458870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129449104_129449290_129449514_129450676_129450910_129452500_129452732_129458503
ENSMUSG00000025809.16_129449289_129459461_1	chr8	+	1583	4	ISM	ENSMUSG00000025809.16	ENST00000678591.1	3472	14	15739	258	15739	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCACAAATACTGTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	129449288	129459461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129449514_129450676_129450910_129452500_129452668_129458503
ENSMUSG00000025809.16_129449289_129459461_2	chr8	+	1664	5	ISM	ENSMUSG00000025809.16	ENST00000423113.5	3566	15	15739	258	15739	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1016	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCACAAATACTGTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	129449288	129459461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129449514_129450676_129450910_129452500_129452668_129453463_129453545_129458503
ENSMUSG00000025809.16_129450677_129459682_1	chr8	+	1660	4	ISM	ENSMUSG00000025809.16	ENST00000423113.5	3566	15	17127	37	17127	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGGCTCTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	129450676	129459682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129450910_129452500_129452668_129453463_129453545_129458503
ENSMUSG00000025809.16_129450814_129459682_1	chr8	+	1523	4	ISM	ENSMUSG00000025809.16	ENST00000423113.5	3566	15	17264	37	17264	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGGCTCTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	129450813	129459682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129450910_129452500_129452668_129453463_129453545_129458503
ENSMUSG00000025809.16_129450814_129459682_2	chr8	+	1442	3	ISM	ENSMUSG00000025809.16	ENST00000678591.1	3472	14	17264	37	17264	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	773	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGGCTCTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	129450813	129459682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129450910_129452500_129452668_129458503
ENSMUSG00000025809.16_129452531_129459364_1	chr8	+	1062	2	ISM	ENSMUSG00000025809.16	ENST00000676659.1	3485	14	18981	291	18981	-291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCACCTTCTCTAATCT	NA	NA	NA	NA	NA	NA	NA	NA	129452530	129459364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129452732_129458503
ENSMUSG00000025809.16_129452582_129459419_1	chr8	+	1066	2	ISM	ENSMUSG00000025809.16	ENST00000676659.1	3485	14	19032	236	19032	-236	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCATTACCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	129452581	129459419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129452732_129458503
ENSMUSG00000025809.16_129452648_129459500_1	chr8	+	1081	2	ISM	ENSMUSG00000025809.16	ENST00000676659.1	3485	14	19098	155	19098	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAGGGCCTGGGCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	129452647	129459500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129452732_129458503
ENSMUSG00000025810.10_129085878_129160833_1	chr8	+	1121	6	ISM	ENSMUSG00000025810.10	ENST00000374821.9	1965	11	-25	53612	-25	-53612	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTACAAGGAGTGGATC	NA	NA	NA	NA	NA	NA	NA	NA	129085877	129160833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129086114_129089699_129089875_129145193_129145376_129152222_129152451_129158372_129158529_129160689
ENSMUSG00000025810.10_129086047_129184397_1	chr8	+	1035	7	ISM	ENSMUSG00000025810.10	ENST00000374821.9	1965	11	144	30048	144	-30048	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACCAAGAAGAAATATTA	NA	NA	NA	NA	NA	NA	NA	NA	129086046	129184397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129086114_129089699_129089875_129145193_129145376_129152222_129152451_129158372_129158529_129160689_129160857_129184337
ENSMUSG00000025810.10_129089725_129187112_1	chr8	+	1059	7	ISM	ENSMUSG00000025810.10	ENST00000374821.9	1965	11	3822	27333	3822	-27333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACAGATGTTGTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	129089724	129187112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129089875_129145193_129145376_129152222_129152451_129158372_129158529_129160689_129160857_129184337_129184494_129187092
ENSMUSG00000025810.10_129089804_129187140_1	chr8	+	1008	7	ISM	ENSMUSG00000025810.10	ENST00000374821.9	1965	11	3901	27305	3901	-27305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAACCACTGATAACTCG	NA	NA	NA	NA	NA	NA	NA	NA	129089803	129187140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129089875_129145193_129145376_129152222_129152451_129158372_129158529_129160689_129160857_129184337_129184494_129187092
ENSMUSG00000025810.10_129089833_129187213_1	chr8	+	1052	7	ISM	ENSMUSG00000025810.10	ENST00000374821.9	1965	11	3930	27232	3930	-27232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTATGGCTGCAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	129089832	129187213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129089875_129145193_129145376_129152222_129152451_129158372_129158529_129160689_129160857_129184337_129184494_129187092
ENSMUSG00000025810.10_129145304_129194934_1	chr8	+	1031	7	ISM	ENSMUSG00000025810.10	ENST00000374821.9	1965	11	59401	19511	59401	-19511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGACCAGTCGTACCGG	NA	NA	NA	NA	NA	NA	NA	NA	129145303	129194934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129145376_129152222_129152451_129158372_129158529_129160689_129160857_129184337_129184494_129187092_129187238_129194827
ENSMUSG00000025810.10_129152395_129202655_1	chr8	+	1037	7	ISM	ENSMUSG00000025810.10	ENST00000374821.9	1965	11	66492	11790	66492	-11790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACCTGAGCTTCGGACG	NA	NA	NA	NA	NA	NA	NA	NA	129152394	129202655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129152451_129158372_129158529_129160689_129160857_129184337_129184494_129187092_129187238_129194827_129195160_129202630
ENSMUSG00000025810.10_129158469_129214407_1	chr8	+	1035	7	ISM	ENSMUSG00000025810.10	ENST00000374821.9	1965	11	72566	38	72566	-38	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCATTATAGACAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	129158468	129214407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129158529_129160689_129160857_129184337_129184494_129187092_129187238_129194827_129195160_129202630_129202776_129214377
ENSMUSG00000025810.10_129207391_129219607_1	chr8	+	240	3	ISM	ENSMUSG00000025810.10	ENSMUST00000026917.10	3597	17	121626	10237	121488	5162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGACCAGCAAGACAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	129207390	129219607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_129207471_129214377_129214438_129219507
ENSMUSG00000025812.19_127790995_128338498_1	chr8	+	4414	26	NIC	ENSMUSG00000025812.19	novel	4832	26	NA	NA	0	47	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	2150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTACTGGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	127790994	128338498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136186_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912_128337390_128338329
ENSMUSG00000025812.19_127791095_128098359_1	chr8	+	1276	8	ISM	ENSMUSG00000025812.19	ENSMUST00000160766.8	4949	23	0	240092	0	-30181	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGATGCATTTAGTCGCA	NA	NA	NA	NA	NA	NA	NA	NA	127791094	128098359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128083755_128083848_128086207_128086292_128096728_128096855_128097976
ENSMUSG00000025812.19_127791095_128200978_1	chr8	+	3175	21	ISM	ENSMUSG00000025812.19	ENST00000350537.9	4703	25	247	137788	0	41353	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTATGAAGGCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	127791094	128200978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859
ENSMUSG00000025812.19_127791095_128338767_1	chr8	+	4583	26	NIC	ENSMUSG00000025812.19	novel	4832	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	2507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	127791094	128338767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136186_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912_128337390_128338329
ENSMUSG00000025812.19_127887958_128201096_1	chr8	+	3166	20	ISM	ENSMUSG00000025812.19	ENST00000350537.9	4703	25	97110	137670	96863	41471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGCTGGCAGCCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	127887957	128201096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859
ENSMUSG00000025812.19_128003502_128104795_1	chr8	+	1314	8	ISM	ENSMUSG00000025812.19	ENSMUST00000160766.8	4949	23	212407	233656	-22564	-23745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGTAACTATAAGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	128003501	128104795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128003683_128032810_128032990_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666
ENSMUSG00000025812.19_128003502_128319662_1	chr8	+	3183	20	ISM	ENSMUSG00000025812.19	ENST00000350537.9	4703	25	212654	19104	-22564	-17624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTTTGGTCCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	128003501	128319662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541
ENSMUSG00000025812.19_128032791_128115109_1	chr8	+	1272	8	ISM	ENSMUSG00000025812.19	ENSMUST00000160766.8	4949	23	241696	223342	0	-13431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCAAAGAGAACCACGCAG	NA	NA	NA	NA	NA	NA	NA	NA	128032790	128115109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128032990_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128114990
ENSMUSG00000025812.19_128032791_128336927_1	chr8	+	3165	21	ISM	ENSMUSG00000025812.19	ENST00000350537.9	4703	25	241943	1839	0	-359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGCTCCATATCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	128032790	128336927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ENSMUSG00000025812.19_128032900_128336978_1	chr8	+	3107	21	ISM	ENSMUSG00000025812.19	ENST00000350537.9	4703	25	242052	1788	109	-308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTCCAGAGTGCCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	128032899	128336978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ENSMUSG00000025812.19_128050614_128337157_1	chr8	+	3104	20	ISM	ENSMUSG00000025812.19	ENST00000350537.9	4703	25	259766	1609	17823	-129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCCCTTCCGGCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	128050613	128337157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ENSMUSG00000025812.19_128083792_128337286_1	chr8	+	3157	19	ISM	ENSMUSG00000025812.19	ENSMUST00000160766.8	4949	23	292697	1165	51001	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAATAAAGGACATTTACC	NA	NA	NA	NA	NA	NA	NA	NA	128083791	128337286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ENSMUSG00000025812.19_128096781_128338451_1	chr8	+	3190	18	ISM	ENSMUSG00000025812.19	ENST00000350537.9	4703	25	305933	315	63990	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAAGAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	128096780	128338451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912_128337390_128338329
ENSMUSG00000025812.19_128103223_128338767_1	chr8	+	3051	16	ISM	ENSMUSG00000025812.19	ENST00000350537.9	4703	25	312375	-1	70432	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128103222	128338767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128103365_128104666_128104796_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912_128337390_128338329
ENSMUSG00000025812.19_128104730_128153165_1	chr8	+	1310	8	ISM	ENSMUSG00000025812.19	ENST00000374794.8	4505	22	313882	185601	71939	-6141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGAGAGAAGGAGAAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	128104729	128153165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128104796_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128142050_128142279_128153002
ENSMUSG00000025812.19_128131926_128336979_1	chr8	+	1285	8	ISM	ENSMUSG00000025812.19	ENST00000374794.8	4505	22	341078	1787	99135	-307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCCAGAGTGCCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	128131925	128336979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128132046_128136036_128136189_128142050_128142279_128153002_128153235_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ENSMUSG00000025812.19_128136131_128337123_1	chr8	+	1215	7	ISM	ENSMUSG00000025812.19	ENST00000374794.8	4505	22	345283	1643	103340	-163	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTGAAGAAGCAGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	128136130	128337123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128136189_128142050_128142279_128153002_128153235_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ENSMUSG00000025812.19_128142170_128337329_1	chr8	+	1244	6	ISM	ENSMUSG00000025812.19	ENST00000374794.8	4505	22	351322	1437	109379	43	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTTTAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	128142169	128337329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128142279_128153002_128153235_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ENSMUSG00000025812.19_128153057_128338451_1	chr8	+	1263	6	ISM	ENSMUSG00000025812.19	ENST00000374794.8	4505	22	362209	315	120266	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAAGAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	128153056	128338451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128153235_128200859_128201097_128319541_128319663_128329539_128329668_128336912_128337390_128338329
ENSMUSG00000025812.19_128153109_128338480_1	chr8	+	1240	6	ISM	ENSMUSG00000025812.19	ENST00000374794.8	4505	22	362261	286	120318	29	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGATATGCCTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	128153108	128338480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128153235_128200859_128201097_128319541_128319663_128329539_128329668_128336912_128337390_128338329
ENSMUSG00000025812.19_128153181_128338520_1	chr8	+	1208	6	ISM	ENSMUSG00000025812.19	ENST00000374794.8	4505	22	362333	246	120390	69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTGTGTAGACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	128153180	128338520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128153235_128200859_128201097_128319541_128319663_128329539_128329668_128336912_128337390_128338329
ENSMUSG00000025812.19_128337142_128338536_1	chr8	+	455	2	ISM	ENSMUSG00000025812.19	ENST00000350537.9	4703	25	546294	230	304351	85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTTTAGAAAATAATGC	NA	NA	NA	NA	NA	NA	NA	NA	128337141	128338536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128337390_128338329
ENSMUSG00000025812.19_128337194_128338591_1	chr8	+	458	2	ISM	ENSMUSG00000025812.19	ENST00000350537.9	4703	25	546346	175	304403	140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAATGGCTTTATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	128337193	128338591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128337390_128338329
ENSMUSG00000025812.19_128337266_128338657_1	chr8	+	452	2	ISM	ENSMUSG00000025812.19	ENST00000350537.9	4703	25	546418	109	304475	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTGACCTTGGACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	128337265	128338657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_128337390_128338329
ENSMUSG00000025816.16_5875840_5878621_1	chr2	-	1061	2	ISM	ENSMUSG00000025816.16	ENSMUST00000193792.6	2110	11	21524	0	21509	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTTGCAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	5878621	5875839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5876833_5878553
ENSMUSG00000025816.16_5875982_5879106_1	chr2	-	997	3	ISM	ENSMUSG00000025816.16	ENSMUST00000193792.6	2110	11	21039	142	21024	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCGTCCCCAAAGCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	5879106	5875981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5876833_5878553_5878631_5879037
ENSMUSG00000025816.16_5876021_5879180_1	chr2	-	1032	3	ISM	ENSMUSG00000025816.16	ENSMUST00000193792.6	2110	11	20965	181	20950	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTCTACTCCAATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	5879180	5876020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5876833_5878553_5878631_5879037
ENSMUSG00000025816.16_5876172_5881271_1	chr2	-	1027	4	ISM	ENSMUSG00000025816.16	ENSMUST00000102981.10	2448	12	18972	374	18859	-332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAACTGCCACTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	5881271	5876171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174
ENSMUSG00000025816.16_5876228_5881303_1	chr2	-	1003	4	ISM	ENSMUSG00000025816.16	ENSMUST00000102981.10	2448	12	18940	430	18827	-388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAATTTTTATACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5881303	5876227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174
ENSMUSG00000025816.16_5876703_5887476_1	chr2	-	997	7	ISM	ENSMUSG00000025816.16	ENSMUST00000102981.10	2448	12	12767	905	12654	-863	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATATTTGTTAAGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	5887476	5876702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174_5881373_5881651_5881813_5882665_5882820_5887391
ENSMUSG00000025816.16_5879067_5896152_1	chr2	-	1049	8	ISM	ENSMUSG00000025816.16	ENSMUST00000102981.10	2448	12	4091	3269	3978	-3227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGTTTCTGGTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	5896152	5879066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5879230_5881174_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100
ENSMUSG00000025816.16_5881217_5900130_1	chr2	-	989	9	ISM	ENSMUSG00000025816.16	ENSMUST00000102981.10	2448	12	113	5419	0	1449	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGGCAACTTCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	5900130	5881216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ENSMUSG00000025817.13_5849845_5873551_1	chr2	+	1584	9	NNC	ENSMUSG00000025817.13	novel	1590	10	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTGGGGGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5849844	5873551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869268_5871164_5871219_5872908
ENSMUSG00000025817.13_5849845_5873551_3	chr2	+	1596	9	NNC	ENSMUSG00000025817.13	novel	1590	10	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTGGGGGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5849844	5873551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ENSMUSG00000025817.13_5867164_5873777_1	chr2	+	1197	5	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	17319	230	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATTCTAATTAATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	5867163	5873777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ENSMUSG00000025823.10_47773075_47780435_1	chr6	-	1377	5	ISM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	9929	0	9929	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTGCCTTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	47780435	47773074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364
ENSMUSG00000025823.10_47773226_47780586_1	chr6	-	1377	5	ISM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	9778	151	9778	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTATCATTTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	47780586	47773225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364
ENSMUSG00000025823.10_47773546_47783536_1	chr6	-	1297	7	ISM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	6828	471	6828	-471	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTCCCAGTGGGGACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	47783536	47773545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439
ENSMUSG00000025823.10_47773683_47784060_1	chr6	-	1323	8	ISM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	6304	608	6304	-608	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	778	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTAGAGCCTATCTATAC	NA	NA	NA	NA	NA	NA	NA	NA	47784060	47773682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939
ENSMUSG00000025823.10_47773756_47784090_1	chr6	-	1280	8	ISM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	6274	681	6274	-681	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCCATTGTGATGGACC	NA	NA	NA	NA	NA	NA	NA	NA	47784090	47773755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939
ENSMUSG00000025823.10_47773775_47785137_1	chr6	-	1345	9	ISM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	5227	700	5227	-700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGTGGGAAAGACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	47785137	47773774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108
ENSMUSG00000025823.10_47775473_47790298_1	chr6	-	1396	9	ISM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	66	2398	66	-2398	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	859	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCCATTGCTGACGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	47790298	47775472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ENSMUSG00000025823.10_47775519_47790298_1	chr6	-	1350	9	ISM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	66	2444	66	-2444	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	687	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTAACAAAGTCCTAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	47790298	47775518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ENSMUSG00000025825.13_113910879_113916006_1	chr5	+	538	5	NNC	ENSMUSG00000025825.13	novel	957	5	NA	NA	15	147	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGCTTCCTGCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	113910878	113916006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_113911006_113912323_113912438_113913284_113913390_113914831_113914911_113915893
ENSMUSG00000025825.13_113910879_113916006_2	chr5	+	544	5	FSM	ENSMUSG00000025825.13	ENSMUST00000026937.12	957	5	70	343	15	147	multi-exon	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGCTTCCTGCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	113910878	113916006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113914911_113915893
ENSMUSG00000025825.13_113910879_113916019_1	chr5	+	557	5	FSM	ENSMUSG00000025825.13	ENSMUST00000026937.12	957	5	70	330	15	160	multi-exon	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACCCTGCACATCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	113910878	113916019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113914911_113915893
ENSMUSG00000025825.13_113910879_113916026_1	chr5	+	564	5	FSM	ENSMUSG00000025825.13	ENSMUST00000026937.12	957	5	70	323	15	167	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCACATCAAAGAAGCTACG	NA	NA	NA	NA	NA	NA	NA	NA	113910878	113916026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113914911_113915893
ENSMUSG00000025825.13_113912367_113916006_1	chr5	+	603	4	ISM	ENSMUSG00000025825.13	ENSMUST00000112312.8	1116	5	1503	328	1503	147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGCTTCCTGCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	113912366	113916006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_113912438_113913278_113913390_113914831_113915140_113915893
ENSMUSG00000025825.13_113914831_113916349_1	chr5	+	536	2	ISM	ENSMUSG00000025825.13	ENSMUST00000026937.12	957	5	4022	0	3967	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTCTCGACTCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	113914830	113916349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_113914911_113915893
ENSMUSG00000025854.16_138740643_138743699_1	chr5	+	1482	2	ISM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	374	52133	374	-52133	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGACCTCGGCTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	138740642	138743699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138741981_138743555
ENSMUSG00000025854.16_138740842_138780763_1	chr5	+	1505	5	ISM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	573	15069	573	-15069	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTCCCTCCAGTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	138740841	138780763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138741981_138743555_138743735_138752383_138752463_138778941_138779035_138780748
ENSMUSG00000025854.16_138740842_138780818_1	chr5	+	1560	5	ISM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	573	15014	573	-15014	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACGCGGGATAAGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	138740841	138780818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138741981_138743555_138743735_138752383_138752463_138778941_138779035_138780748
ENSMUSG00000025854.16_138741072_138792052_1	chr5	+	1467	6	ISM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	803	3780	803	-3780	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCCTTCCTGCCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	138741071	138792052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138741981_138743555_138743735_138752383_138752463_138778941_138779035_138780748_138780865_138791961
ENSMUSG00000025854.16_138741189_138793094_1	chr5	+	1529	7	ISM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	920	2738	920	-2738	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCTTTGATTTCCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	138741188	138793094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138741981_138743555_138743735_138752383_138752463_138778941_138779035_138780748_138780865_138791961_138792143_138793005
ENSMUSG00000025854.16_138741412_138793839_1	chr5	+	1458	9	ISM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	1143	1993	1143	-1993	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTGCAGGTACGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	138741411	138793839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138741981_138743555_138743735_138752383_138752463_138778941_138779035_138780748_138780865_138791961_138792143_138793005_138793116_138793228_138793311_138793790
ENSMUSG00000025854.16_138741548_138794983_1	chr5	+	1454	10	FSM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	1279	849	1279	-849	multi-exon	TRUE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGGCCCTGGACCGGCG	NA	NA	NA	NA	NA	NA	NA	NA	138741547	138794983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_138741981_138743555_138743735_138752383_138752463_138778941_138779035_138780748_138780865_138791961_138792143_138793005_138793116_138793228_138793311_138793790_138793851_138794862
ENSMUSG00000025854.16_138741590_138795136_1	chr5	+	1565	10	FSM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	1321	696	1321	-696	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGCACAGAGCCTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	138741589	138795136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_138741981_138743555_138743735_138752383_138752463_138778941_138779035_138780748_138780865_138791961_138792143_138793005_138793116_138793228_138793311_138793790_138793851_138794862
ENSMUSG00000025854.16_138741653_138795136_1	chr5	+	1502	10	FSM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	1384	696	1384	-696	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGCACAGAGCCTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	138741652	138795136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_138741981_138743555_138743735_138752383_138752463_138778941_138779035_138780748_138780865_138791961_138792143_138793005_138793116_138793228_138793311_138793790_138793851_138794862
ENSMUSG00000025854.16_138743572_138795454_1	chr5	+	1476	9	ISM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	3303	378	3303	-378	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTCTGGCCCCCAATT	NA	NA	NA	NA	NA	NA	NA	NA	138743571	138795454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138743735_138752383_138752463_138778941_138779035_138780748_138780865_138791961_138792143_138793005_138793116_138793228_138793311_138793790_138793851_138794862
ENSMUSG00000025854.16_138743635_138795497_1	chr5	+	1456	9	ISM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	3366	335	3366	-335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGGGCCTCCTCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	138743634	138795497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138743735_138752383_138752463_138778941_138779035_138780748_138780865_138791961_138792143_138793005_138793116_138793228_138793311_138793790_138793851_138794862
ENSMUSG00000025854.16_138743672_138795561_1	chr5	+	1483	9	ISM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	3403	271	3403	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGTGTCGGAGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	138743671	138795561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138743735_138752383_138752463_138778941_138779035_138780748_138780865_138791961_138792143_138793005_138793116_138793228_138793311_138793790_138793851_138794862
ENSMUSG00000025854.16_138779004_138795832_1	chr5	+	1550	7	ISM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	38735	0	38735	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGGGACTCACTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	138779003	138795832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138779035_138780748_138780865_138791961_138792143_138793005_138793116_138793228_138793311_138793790_138793851_138794862
ENSMUSG00000025856.16_138961769_138974208_1	chr5	-	1634	4	ISM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	6584	0	6500	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGATGCATCCCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	138974208	138961768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103
ENSMUSG00000025856.16_138961961_138979122_1	chr5	-	1522	5	ISM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	1670	192	1586	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAAGCTGTTGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	138979122	138961960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042
ENSMUSG00000025856.16_138962271_138980708_3	chr5	-	1474	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	84	502	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCTTGGATGACATTT	NA	NA	NA	NA	NA	NA	NA	NA	138980708	138962270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
ENSMUSG00000025856.16_138962900_138982009_1	chr5	-	786	7	ISM	ENSMUSG00000025856.16	ENSMUST00000110896.2	1363	8	1116	174	-167	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCATTGCCAATGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	138982009	138962899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463_138980594_138981953
ENSMUSG00000025857.11_139136306_139139194_1	chr5	+	677	4	ISM	ENSMUSG00000025857.11	ENSMUST00000026975.11	3450	13	328	33071	322	-32589	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTTCACCTCCTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	139136305	139139194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112
ENSMUSG00000025857.11_139136418_139147523_1	chr5	+	670	5	ISM	ENSMUSG00000025857.11	ENSMUST00000026975.11	3450	13	440	24742	434	-24260	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGATATCACCGACTG	NA	NA	NA	NA	NA	NA	NA	NA	139136417	139147523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455
ENSMUSG00000025857.11_139137309_139149053_1	chr5	+	691	5	ISM	ENSMUSG00000025857.11	ENSMUST00000196441.2	2426	13	1325	22730	1325	-22730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGATCCTCGCTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	139137308	139149053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953
ENSMUSG00000025857.11_139147471_139156038_1	chr5	+	685	4	ISM	ENSMUSG00000025857.11	ENSMUST00000196441.2	2426	13	11487	15745	11487	-15745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGGGCAGTGCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	139147470	139156038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139147689_139148953_139149167_139151814_139151959_139155928
ENSMUSG00000025857.11_139159979_139171403_1	chr5	+	689	5	ISM	ENSMUSG00000025857.11	ENSMUST00000196441.2	2426	13	23995	380	23995	-380	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCATCAGCTACTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	139159978	139171403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139171264
ENSMUSG00000025857.11_139163744_139171506_1	chr5	+	668	4	ISM	ENSMUSG00000025857.11	ENSMUST00000196441.2	2426	13	27760	277	27760	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACATCAGCTTCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	139163743	139171506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139163821_139167171_139167329_139170282_139170475_139171264
ENSMUSG00000025857.11_139170282_139171783_1	chr5	+	712	2	ISM	ENSMUSG00000025857.11	ENSMUST00000196441.2	2426	13	34298	0	34298	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGTCCAGTCTTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	139170281	139171783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139170475_139171264
ENSMUSG00000025858.13_139238079_139255806_1	chr5	+	2099	9	NNC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTAGTCCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	139238078	139255806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251513_139252758_139252900_139252981_139253058_139253157_139253231_139254735
ENSMUSG00000025858.13_139238079_139255806_2	chr5	+	2100	9	NNC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTAGTCCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	139238078	139255806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252988_139253058_139253157_139253231_139254735
ENSMUSG00000025868.7_54738020_54738632_1	chr13	+	309	2	FSM	ENSMUSG00000025868.7	ENSMUST00000026986.7	648	2	0	339	0	-339	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCACAGGGTTTCACGGTC	NA	NA	NA	NA	NA	NA	NA	NA	54738019	54738632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_54738233_54738536
ENSMUSG00000025868.7_54738140_54738632_1	chr13	+	189	2	FSM	ENSMUSG00000025868.7	ENSMUST00000026986.7	648	2	120	339	120	-339	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCACAGGGTTTCACGGTC	NA	NA	NA	NA	NA	NA	NA	NA	54738139	54738632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_54738233_54738536
ENSMUSG00000025869.12_54732654_54733650_1	chr13	-	602	2	ISM	ENSMUSG00000025869.12	ENSMUST00000148222.2	790	6	4221	305	4159	-305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTAACATGACTAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	54733650	54732653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54733238_54733632
ENSMUSG00000025869.12_54732836_54737514_1	chr13	-	618	4	ISM	ENSMUSG00000025869.12	ENSMUST00000148222.2	790	6	357	487	295	-487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGCCTCTCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	54737514	54732835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475
ENSMUSG00000025869.12_54732898_54737553_1	chr13	-	595	4	ISM	ENSMUSG00000025869.12	ENSMUST00000148222.2	790	6	318	549	256	-549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTAGCTGTCCTAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	54737553	54732897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475
ENSMUSG00000025869.12_54733052_54737806_1	chr13	-	605	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	97	1054	3	-703	multi-exon	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGCCAGGCTGTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	54737806	54733051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
ENSMUSG00000025869.12_54733629_54737806_1	chr13	-	423	4	ISM	ENSMUSG00000025869.12	ENSMUST00000148222.2	790	6	65	1280	3	-1280	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTGCCCACAGGAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	54737806	54733628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54733740_54736410_54736481_54737475_54737585_54737673
ENSMUSG00000025870.11_54722970_54728941_1	chr13	+	904	4	FSM	ENSMUSG00000025870.11	ENSMUST00000026988.11	1046	4	142	0	142	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCAGCAGGCTCAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	54722969	54728941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_54723091_54723562_54723762_54726605_54726782_54728533
ENSMUSG00000025871.19_54699453_54700806_1	chr13	-	1274	2	ISM	ENSMUSG00000025871.19	ENSMUST00000153065.8	2502	8	12310	417	6328	-417	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTGCCTCTGCCGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	54700806	54699452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54700631_54700710
ENSMUSG00000025871.19_54699651_54704432_1	chr13	-	1320	4	ISM	ENSMUSG00000025871.19	ENSMUST00000153065.8	2502	8	8684	615	2702	-615	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTCTAATTCCATTACT	NA	NA	NA	NA	NA	NA	NA	NA	54704432	54699650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339
ENSMUSG00000025871.19_54699807_54707099_1	chr13	-	1285	5	ISM	ENSMUSG00000025871.19	ENSMUST00000153065.8	2502	8	6017	771	35	602	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCACACCACTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	54707099	54699806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010
ENSMUSG00000025871.19_54700071_54712053_1	chr13	-	1294	7	ISM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	1195	1040	-29	338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGCCTGGACTTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	54712053	54700070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997
ENSMUSG00000025871.19_54700209_54712434_1	chr13	-	1295	8	ISM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	814	1178	2	200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCTAGGTAAATTATGC	NA	NA	NA	NA	NA	NA	NA	NA	54712434	54700208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327
ENSMUSG00000025871.19_54700209_54712434_2	chr13	-	1207	7	ISM	ENSMUSG00000025871.19	ENSMUST00000153065.8	2502	8	682	1173	2	200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCTAGGTAAATTATGC	NA	NA	NA	NA	NA	NA	NA	NA	54712434	54700208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54712327
ENSMUSG00000025871.19_54700409_54707147_1	chr13	-	736	5	FSM	ENSMUSG00000025871.19	ENST00000620366.4	723	5	-13	0	-13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAACTTCCCTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	54707147	54700408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_54700631_54700705_54700851_54701010_54701118_54704339_54704465_54707010
ENSMUSG00000025871.19_54700409_54713104_1	chr13	-	1205	9	FSM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	144	1378	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAACTTCCCTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	54713104	54700408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
ENSMUSG00000025871.19_54700409_54713248_1	chr13	-	1349	9	FSM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	0	1378	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAACTTCCCTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	54713248	54700408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
ENSMUSG00000025871.19_54700525_54700855_1	chr13	-	256	2	ISM	ENSMUSG00000025871.19	ENST00000620366.4	723	5	6279	116	6279	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGATGTCCCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	54700855	54700524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54700631_54700705
ENSMUSG00000025871.19_54700525_54709634_1	chr13	-	739	6	FSM	ENSMUSG00000025871.19	ENST00000614420.4	889	6	34	116	34	-98	multi-exon	FALSE	canonical	NA	NA	NA	NA	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGATGTCCCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	54709634	54700524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_54700631_54700705_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505
ENSMUSG00000025871.19_54700704_54701117_1	chr13	-	254	2	ISM	ENSMUSG00000025871.19	ENST00000620366.4	723	5	6017	295	6017	-277	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTTCAGAAAGACCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	54701117	54700703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54700851_54701010
ENSMUSG00000025871.19_54701011_54704464_1	chr13	-	232	2	ISM	ENSMUSG00000025871.19	ENST00000620366.4	723	5	2670	602	2670	-584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTCTCCCTGGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	54704464	54701010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54701118_54704339
ENSMUSG00000025871.19_54707011_54709634_1	chr13	-	252	2	ISM	ENSMUSG00000025871.19	ENST00000434580.1	910	7	2390	6584	34	-6584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCGCCCTTCAGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	54709634	54707010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54707134_54709505
ENSMUSG00000025872.6_54606650_54614197_1	chr13	-	1869	4	ISM	ENSMUSG00000025872.6	ENSMUST00000026990.6	2335	6	2465	0	2465	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTGTCTAAAGTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	54614197	54606649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992
ENSMUSG00000025872.6_54606817_54615762_1	chr13	-	1826	5	ISM	ENSMUSG00000025872.6	ENSMUST00000026990.6	2335	6	900	167	900	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCTCTCCTGCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	54615762	54606816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992_54614198_54615638
ENSMUSG00000025872.6_54606844_54615770_1	chr13	-	1802	5	NNC	ENSMUSG00000025872.6	novel	2335	6	NA	NA	892	-194	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGCCCATCACTTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	54615770	54606843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_54608051_54611284_54611381_54611494_54611657_54613992_54614198_54615638
ENSMUSG00000025872.6_54607066_54616601_1	chr13	-	1858	6	FSM	ENSMUSG00000025872.6	ENSMUST00000026990.6	2335	6	61	416	61	-416	multi-exon	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCAGGGTAGATGAACC	NA	NA	NA	NA	NA	NA	NA	NA	54616601	54607065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992_54614198_54615638_54615796_54616353
ENSMUSG00000025872.6_54607066_54616601_2	chr13	-	1853	6	NNC	ENSMUSG00000025872.6	novel	2335	6	NA	NA	61	-416	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCAGGGTAGATGAACC	NA	NA	NA	NA	NA	NA	NA	NA	54616601	54607065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_54608051_54611284_54611381_54611494_54611657_54613992_54614198_54615638_54615796_54616353
ENSMUSG00000025873.17_54769637_54811876_1	chr13	+	4272	11	NNC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	845	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCAGCTGTGGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	54769636	54811876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804229_54808766
ENSMUSG00000025875.15_54937190_54944174_1	chr13	+	1170	8	FSM	ENSMUSG00000025875.15	ENSMUST00000026993.14	1585	8	0	415	0	139	multi-exon	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTACCCACTGAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	54937189	54944174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
ENSMUSG00000025875.15_54937408_54943281_1	chr13	+	571	6	ISM	ENSMUSG00000025875.15	ENST00000503045.5	801	8	51	751	0	-650	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACAGGGTTGAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	54937407	54943281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_54937495_54940421_54940473_54940552_54940700_54941076_54941179_54942865_54942992_54943223
ENSMUSG00000025875.15_54940421_54944414_1	chr13	+	1106	7	ISM	ENSMUSG00000025875.15	ENSMUST00000026993.14	1585	8	3231	175	3013	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTCTCAGACCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	54940420	54944414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
ENSMUSG00000025875.15_54940553_54944589_1	chr13	+	1225	6	NNC	ENSMUSG00000025875.15	novel	1585	8	NA	NA	3145	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATGTTCACCGT	NA	NA	NA	NA	NA	NA	NA	NA	54940552	54944589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_54940700_54941007_54941179_54942865_54942992_54943227_54943272_54943778_54943896_54943969
ENSMUSG00000025875.15_54940684_54944035_1	chr13	+	484	6	ISM	ENSMUSG00000025875.15	ENST00000503045.5	801	8	3327	-3	3276	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCCAGGGGTGATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	54940683	54944035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_54940700_54941076_54941179_54942865_54942992_54943223_54943281_54943778_54943896_54943969
ENSMUSG00000025875.15_54940684_54944589_1	chr13	+	1094	6	NNC	ENSMUSG00000025875.15	novel	1585	8	NA	NA	3276	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATGTTCACCGT	NA	NA	NA	NA	NA	NA	NA	NA	54940683	54944589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_54940700_54941007_54941179_54942865_54942992_54943227_54943272_54943778_54943896_54943969
ENSMUSG00000025878.17_55176108_55217622_1	chr13	-	1158	8	ISM	ENSMUSG00000025878.17	ENST00000510698.2	1273	10	7645	-41	7645	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATCTTATTTCAATAG	NA	NA	NA	NA	NA	NA	NA	NA	55217622	55176107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55176532_55178738_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217571
ENSMUSG00000025878.17_55176228_55224220_1	chr13	-	1146	9	NIC	ENSMUSG00000025878.17	novel	1273	10	NA	NA	1047	-79	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCACCAGCACCCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	55224220	55176227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr13_-_55176532_55178738_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217571_55217621_55224110
ENSMUSG00000025878.17_55176228_55225340_1	chr13	-	1214	10	ISM	ENSMUSG00000025878.17	ENSMUST00000099496.4	1678	13	22773	120	-73	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCACCAGCACCCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	55225340	55176227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55225215
ENSMUSG00000025878.17_55176245_55225252_1	chr13	-	1162	10	FSM	ENSMUSG00000025878.17	ENST00000510698.2	1273	10	15	96	15	-96	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGACCCTGTTGTTATCA	NA	NA	NA	NA	NA	NA	NA	NA	55225252	55176244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_55176532_55178738_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217571_55217621_55224114_55224221_55225215
ENSMUSG00000025878.17_55182831_55223204_1	chr13	-	683	7	ISM	ENSMUSG00000025878.17	ENSMUST00000026997.12	2931	15	24904	7138	2063	-6682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCCATGTGGAGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	55223204	55182830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070
ENSMUSG00000025878.17_55198593_55223361_1	chr13	-	673	5	ISM	ENSMUSG00000025878.17	ENSMUST00000026997.12	2931	15	24747	22900	1906	-22444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCATGTACTGCAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	55223361	55198592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070
ENSMUSG00000025878.17_55198667_55223443_1	chr13	-	681	5	ISM	ENSMUSG00000025878.17	ENSMUST00000026997.12	2931	15	24665	22974	1824	-22518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCTCATCTAGTACCC	NA	NA	NA	NA	NA	NA	NA	NA	55223443	55198666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070
ENSMUSG00000025878.17_55223205_55224199_1	chr13	-	688	2	ISM	ENSMUSG00000025878.17	ENSMUST00000026997.12	2931	15	23909	47512	1068	-47056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCCAAAGAGGAAAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	55224199	55223204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55223808_55224114
ENSMUSG00000025878.17_55223363_55225340_1	chr13	-	676	3	ISM	ENSMUSG00000025878.17	ENSMUST00000127195.8	2936	15	22773	47670	-73	-47214	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAGAGCCTGAAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	55225340	55223362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55223804_55224110_55224221_55225215
ENSMUSG00000025878.17_55223652_55248067_1	chr13	-	685	6	ISM	ENSMUSG00000025878.17	ENSMUST00000127195.8	2936	15	46	47959	41	-47503	5prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGTTTGAGAATGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	55248067	55223651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55223804_55224110_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ENSMUSG00000025880.12_75501744_75528690_1	chr18	+	2818	4	FSM	ENSMUSG00000025880.12	ENSMUST00000026999.10	4278	4	1144	316	-210	140	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGACTCCTTAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	75501743	75528690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_75502640_75503965_75504020_75508944_75509020_75526897
ENSMUSG00000025885.19_74867045_74893959_1	chr18	+	877	7	ISM	ENSMUSG00000025885.19	ENST00000449815.2	1132	8	37	1769	37	-1769	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTTCACCAAAGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	74867044	74893959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_74867060_74869216_74869361_74873544_74873697_74875196_74875287_74877691_74877843_74892097_74892384_74893920
ENSMUSG00000025885.19_74869247_74894033_1	chr18	+	906	6	ISM	ENSMUSG00000025885.19	ENST00000449815.2	1132	8	2239	1695	2239	-1695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACCCACGAGGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	74869246	74894033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_74869361_74873544_74873697_74875196_74875287_74877691_74877843_74892097_74892384_74893920
ENSMUSG00000025885.19_74869257_74894013_1	chr18	+	868	6	NNC	ENSMUSG00000025885.19	novel	1132	8	NA	NA	2249	-1715	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTCCTCCAGCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	74869256	74894013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_74869361_74873544_74873697_74875196_74875279_74877691_74877843_74892097_74892384_74893920
ENSMUSG00000025885.19_74869276_74894032_1	chr18	+	868	6	NNC	ENSMUSG00000025885.19	novel	1132	8	NA	NA	2268	-1696	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACCCACGAGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	74869275	74894032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_74869361_74873552_74873697_74875196_74875287_74877691_74877843_74892097_74892384_74893920
ENSMUSG00000025885.19_74869308_74895671_1	chr18	+	932	7	ISM	ENSMUSG00000025885.19	ENST00000449815.2	1132	8	2300	57	2300	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCTTGAATGAATTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	74869307	74895671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_74869361_74873544_74873697_74875196_74875287_74877691_74877843_74892097_74892384_74893920_74894096_74895646
ENSMUSG00000025885.19_74873543_74895727_1	chr18	+	937	6	ISM	ENSMUSG00000025885.19	ENST00000449815.2	1132	8	6535	1	6535	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCTCAAGTGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	74873542	74895727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_74873697_74875196_74875287_74877691_74877843_74892097_74892384_74893920_74894096_74895646
ENSMUSG00000025887.11_5345430_5358355_1	chr9	+	1250	9	ISM	ENSMUSG00000025887.11	ENSMUST00000027009.11	2649	11	0	14677	0	-468	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGGTTTGGTTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	5345429	5358355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_5345526_5346481_5346734_5348898_5348959_5350399_5350478_5352196_5352292_5352671_5352846_5353633_5353869_5354533_5354684_5358245
ENSMUSG00000025887.11_5346513_5358823_1	chr9	+	1222	9	ISM	ENSMUSG00000025887.11	ENSMUST00000027009.11	2649	11	1083	14209	1009	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGGCAACTCTCATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	5346512	5358823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_5346734_5348898_5348959_5350399_5350478_5352196_5352292_5352671_5352846_5353633_5353869_5354533_5354684_5358245_5358356_5358724
ENSMUSG00000025887.11_5346658_5371815_1	chr9	+	1160	10	ISM	ENSMUSG00000025887.11	ENSMUST00000027009.11	2649	11	1228	1217	1154	-1217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTAAAACTTTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	5346657	5371815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_5346734_5348898_5348959_5350399_5350478_5352196_5352292_5352671_5352846_5353633_5353869_5354533_5354684_5358245_5358356_5358724_5358844_5371752
ENSMUSG00000025887.11_5350450_5372070_1	chr9	+	1229	8	ISM	ENSMUSG00000025887.11	ENSMUST00000027009.11	2649	11	5020	962	4946	-962	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAGGAAAAAGACACTAA	NA	NA	NA	NA	NA	NA	NA	NA	5350449	5372070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_5350478_5352196_5352292_5352671_5352846_5353633_5353869_5354533_5354684_5358245_5358356_5358724_5358844_5371752
ENSMUSG00000025887.11_5352735_5372194_1	chr9	+	1167	6	ISM	ENSMUSG00000025887.11	ENSMUST00000027009.11	2649	11	7305	838	7231	-838	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTTGCATATGTAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	5352734	5372194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_5352846_5353633_5353869_5354533_5354684_5358245_5358356_5358724_5358844_5371752
ENSMUSG00000025887.11_5353738_5372400_1	chr9	+	1158	5	ISM	ENSMUSG00000025887.11	ENSMUST00000027009.11	2649	11	8308	632	8234	-632	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATACACATTTAAGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	5353737	5372400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_5353869_5354533_5354684_5358245_5358356_5358724_5358844_5371752
ENSMUSG00000025887.11_5354592_5372603_1	chr9	+	1172	4	ISM	ENSMUSG00000025887.11	ENSMUST00000027009.11	2649	11	9162	429	9088	-429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACTGAGCTCAAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	5354591	5372603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_5354684_5358245_5358356_5358724_5358844_5371752
ENSMUSG00000025887.11_5358322_5372769_1	chr9	+	1170	3	ISM	ENSMUSG00000025887.11	ENSMUST00000027009.11	2649	11	12892	263	12818	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCATACCAGATCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	5358321	5372769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_5358356_5358724_5358844_5371752
ENSMUSG00000025887.11_5358723_5372881_1	chr9	+	1250	2	ISM	ENSMUSG00000025887.11	ENSMUST00000027009.11	2649	11	13293	151	13219	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTCATGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	5358722	5372881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_5358844_5371752
ENSMUSG00000025888.7_5303038_5306769_1	chr9	+	573	4	NNC	ENSMUSG00000025888.7	novel	621	4	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAGTATGTCATACCAATG	NA	NA	NA	NA	NA	NA	NA	NA	5303037	5306769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_5303172_5303539_5303769_5306116_5306227_5306669
ENSMUSG00000025888.7_5303038_5306769_2	chr9	+	579	4	FSM	ENSMUSG00000025888.7	ENST00000534497.5	621	4	42	0	42	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAGTATGTCATACCAATG	NA	NA	NA	NA	NA	NA	NA	NA	5303037	5306769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_5303172_5303539_5303775_5306116_5306227_5306669
ENSMUSG00000025889.14_60708559_60804581_1	chr6	-	927	4	NNC	ENSMUSG00000025889.14	novel	1188	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGGTTCCTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	60804581	60708558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_60709146_60710087_60710172_60792600_60792736_60804460
ENSMUSG00000025889.14_60708559_60804581_2	chr6	-	889	4	FSM	ENSMUSG00000025889.14	ENST00000345009.8	975	4	10	76	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGGTTCCTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	60804581	60708558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_60709146_60792600_60792744_60795307_60795350_60804464
ENSMUSG00000025889.14_60708559_60804581_3	chr6	-	925	4	NNC	ENSMUSG00000025889.14	novel	1188	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3960	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGGTTCCTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	60804581	60708558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_60709146_60710087_60710166_60792600_60792744_60804464
ENSMUSG00000025889.14_60708559_60804581_4	chr6	-	931	4	FSM	ENSMUSG00000025889.14	ENST00000618500.4	1017	4	10	76	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGGTTCCTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	60804581	60708558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_60709146_60710087_60710172_60792600_60792744_60804464
ENSMUSG00000025889.14_60792600_60804581_1	chr6	-	257	2	NNC	ENSMUSG00000025889.14	novel	265	2	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCCTGTTTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	60804581	60792599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_60792744_60804468
ENSMUSG00000025893.9_4309835_4331711_1	chr9	+	2208	3	FSM	ENSMUSG00000025893.9	ENSMUST00000049648.9	2231	3	2	21	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACGATGGAAAAAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	4309834	4331711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_4309935_4316826_4317072_4329848
ENSMUSG00000025894.12_4295343_4302631_1	chr9	-	1731	3	ISM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	6836	550	6836	-550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCAGCTAGTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	4302631	4295342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_4296840_4299297_4299370_4302469
ENSMUSG00000025894.12_4295462_4303116_1	chr9	-	1635	4	ISM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	6351	669	6351	-669	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTATGTCCTGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	4303116	4295461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093
ENSMUSG00000025894.12_4295572_4308782_1	chr9	-	1713	5	ISM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	685	779	685	-779	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTTGAGGAAAATCTAC	NA	NA	NA	NA	NA	NA	NA	NA	4308782	4295571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693
ENSMUSG00000025894.12_4295682_4308831_1	chr9	-	1652	5	ISM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	636	889	636	-889	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACCTACTCTAACAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	4308831	4295681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693
ENSMUSG00000025894.12_4295842_4309323_1	chr9	-	1650	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	144	1049	144	-1049	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCTGGAAACATGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	4309323	4295841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
ENSMUSG00000025894.12_4295921_4309467_1	chr9	-	1715	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	0	1128	0	-1128	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACAACCATGGCAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	4309467	4295920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
ENSMUSG00000025899.15_3345825_3385184_1	chr9	+	818	6	NNC	ENSMUSG00000025899.15	novel	1267	6	NA	NA	44	-409	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGATGAGCTAAACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	3345824	3385184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_3345877_3347803_3347909_3359483_3359591_3369657_3369919_3382693_3382844_3385041
ENSMUSG00000025899.15_3347837_3385285_1	chr9	+	834	5	NNC	ENSMUSG00000025899.15	novel	1267	6	NA	NA	2056	-308	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATCACCAAGGAAGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	3347836	3385285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_3347909_3359483_3359591_3369657_3369919_3382693_3382844_3385041
ENSMUSG00000025899.15_3369849_3385593_1	chr9	+	768	3	ISM	ENSMUSG00000025899.15	ENST00000452221.1	1267	6	24068	0	24068	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGATCACTTATCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	3369848	3385593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_3369915_3382693_3382844_3385041
ENSMUSG00000025900.14_4069780_4423061_1	chr1	-	4206	28	ISM	ENSMUSG00000025900.14	ENST00000637698.1	4322	29	7476	2	1	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCATACCTGGGTAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	4423061	4069779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4069841_4077878_4077961_4089292_4089372_4094958_4095114_4112110_4112331_4162839_4163004_4189890_4189936_4190237_4190297_4212834_4212990_4218034_4218187_4218834_4218968_4234077_4234165_4240427_4240628_4267756_4267865_4276882_4277061_4296833_4297047_4298665_4298843_4301265_4301368_4313352_4313486_4313639_4313843_4315253_4315330_4331749_4331829_4337691_4337844_4354988_4355122_4363148_4363236_4381492_4381657_4422132_4422305_4422424
ENSMUSG00000025900.14_4069780_4430537_1	chr1	-	4320	29	FSM	ENSMUSG00000025900.14	ENST00000637698.1	4322	29	0	2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCATACCTGGGTAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	4430537	4069779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_4069841_4077878_4077961_4089292_4089372_4094958_4095114_4112110_4112331_4162839_4163004_4189890_4189936_4190237_4190297_4212834_4212990_4218034_4218187_4218834_4218968_4234077_4234165_4240427_4240628_4267756_4267865_4276882_4277061_4296833_4297047_4298665_4298843_4301265_4301368_4313352_4313486_4313639_4313843_4315253_4315330_4331749_4331829_4337691_4337844_4354988_4355122_4363148_4363236_4381492_4381657_4422132_4422305_4422424_4423061_4430422
ENSMUSG00000025900.14_4190244_4422456_1	chr1	-	2695	22	FSM	ENSMUSG00000025900.14	ENST00000636932.1	3376	22	606	75	606	-75	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGGTGAGGATTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	4422456	4190243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_4190297_4212834_4212990_4218034_4218187_4218834_4218968_4234077_4234165_4240427_4240628_4267756_4267865_4276882_4277061_4296833_4297047_4298665_4298843_4301265_4301368_4313352_4313486_4313639_4313672_4313765_4313843_4315253_4315330_4331749_4331829_4337691_4337844_4354988_4355122_4363148_4363236_4381492_4381657_4422132_4422305_4422424
ENSMUSG00000025900.14_4212922_4422577_1	chr1	-	2676	21	ISM	ENSMUSG00000025900.14	ENST00000636932.1	3376	22	485	22753	485	-22753	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGACAAATCCCAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	4422577	4212921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4212990_4218034_4218187_4218834_4218968_4234077_4234165_4240427_4240628_4267756_4267865_4276882_4277061_4296833_4297047_4298665_4298843_4301265_4301368_4313352_4313486_4313639_4313672_4313765_4313843_4315253_4315330_4331749_4331829_4337691_4337844_4354988_4355122_4363148_4363236_4381492_4381657_4422132_4422305_4422424
ENSMUSG00000025900.14_4212971_4422637_1	chr1	-	2687	21	ISM	ENSMUSG00000025900.14	ENST00000636932.1	3376	22	425	22802	425	-22802	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGTGTCTCTAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	4422637	4212970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4212990_4218034_4218187_4218834_4218968_4234077_4234165_4240427_4240628_4267756_4267865_4276882_4277061_4296833_4297047_4298665_4298843_4301265_4301368_4313352_4313486_4313639_4313672_4313765_4313843_4315253_4315330_4331749_4331829_4337691_4337844_4354988_4355122_4363148_4363236_4381492_4381657_4422132_4422305_4422424
ENSMUSG00000025900.14_4218119_4422747_1	chr1	-	2694	20	ISM	ENSMUSG00000025900.14	ENST00000636932.1	3376	22	315	27950	315	-27950	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTCTATGGGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	4422747	4218118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4218187_4218834_4218968_4234077_4234165_4240427_4240628_4267756_4267865_4276882_4277061_4296833_4297047_4298665_4298843_4301265_4301368_4313352_4313486_4313639_4313672_4313765_4313843_4315253_4315330_4331749_4331829_4337691_4337844_4354988_4355122_4363148_4363236_4381492_4381657_4422132_4422305_4422424
ENSMUSG00000025900.14_4218924_4422873_1	chr1	-	2663	19	ISM	ENSMUSG00000025900.14	ENST00000636932.1	3376	22	189	28755	189	-28755	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAATGTGTGTCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	4422873	4218923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4218968_4234077_4234165_4240427_4240628_4267756_4267865_4276882_4277061_4296833_4297047_4298665_4298843_4301265_4301368_4313352_4313486_4313639_4313672_4313765_4313843_4315253_4315330_4331749_4331829_4337691_4337844_4354988_4355122_4363148_4363236_4381492_4381657_4422132_4422305_4422424
ENSMUSG00000025900.14_4234076_4422979_1	chr1	-	2727	18	ISM	ENSMUSG00000025900.14	ENST00000636932.1	3376	22	83	43907	83	-43907	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTTTCCTTTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	4422979	4234075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4234165_4240427_4240628_4267756_4267865_4276882_4277061_4296833_4297047_4298665_4298843_4301265_4301368_4313352_4313486_4313639_4313672_4313765_4313843_4315253_4315330_4331749_4331829_4337691_4337844_4354988_4355122_4363148_4363236_4381492_4381657_4422132_4422305_4422424
ENSMUSG00000025903.15_4878053_4915756_1	chr1	+	1294	9	FSM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	7	1206	0	181	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCAAAAAGTAATACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	4878052	4915756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
ENSMUSG00000025903.15_4878115_4915820_1	chr1	+	1296	9	FSM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	69	1142	-4	245	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTATGTAATTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	4878114	4915820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
ENSMUSG00000025903.15_4878134_4915869_1	chr1	+	1326	9	FSM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	88	1093	0	294	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCGTAGAAAACTAATATTG	NA	NA	NA	NA	NA	NA	NA	NA	4878133	4915869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
ENSMUSG00000025903.15_4909637_4916254_1	chr1	+	1321	3	ISM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	31591	708	31503	679	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGGGGAAGTAATATCT	NA	NA	NA	NA	NA	NA	NA	NA	4909636	4916254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_4909712_4911178_4911356_4915185
ENSMUSG00000025909.17_8433407_8515343_1	chr1	-	655	3	ISM	ENSMUSG00000025909.17	ENST00000643740.1	1756	14	358836	126	358824	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTCTATTTTAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	8515343	8433406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_8433858_8484426_8484538_8515250
ENSMUSG00000025909.17_8433649_8653463_1	chr1	-	601	5	ISM	ENSMUSG00000025909.17	ENST00000643740.1	1756	14	220716	368	220704	37	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTGAAGAGACCATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	8653463	8433648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_8433858_8484426_8484538_8515250_8515344_8518203_8518357_8653428
ENSMUSG00000025909.17_8433699_8518228_1	chr1	-	277	3	ISM	ENSMUSG00000025909.17	ENST00000517473.5	1486	16	355969	13	355939	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGAGCTCTGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	8518228	8433698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_8433858_8515250_8515344_8518203
ENSMUSG00000025909.17_8433699_8653544_1	chr1	-	632	5	ISM	ENSMUSG00000025909.17	ENST00000643740.1	1756	14	220635	418	220623	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGAGCTCTGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	8653544	8433698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_8433858_8484426_8484538_8515250_8515344_8518203_8518357_8653428
ENSMUSG00000025909.17_8433699_8653557_1	chr1	-	645	5	ISM	ENSMUSG00000025909.17	ENST00000643740.1	1756	14	220622	418	220610	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGAGCTCTGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	8653557	8433698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_8433858_8484426_8484538_8515250_8515344_8518203_8518357_8653428
ENSMUSG00000025909.17_8433699_8695106_1	chr1	-	1182	10	NNC	ENSMUSG00000025909.17	novel	1554	17	NA	NA	179061	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGAGCTCTGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	8695106	8433698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_8433858_8484426_8484538_8515250_8515344_8518203_8518357_8533617_8533690_8535660_8535803_8653424_8653559_8665635_8665767_8677293_8677377_8695002
ENSMUSG00000025909.17_8433699_8748072_1	chr1	-	1233	12	ISM	ENSMUSG00000025909.17	ENSMUST00000115488.3	1554	17	126095	0	126095	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGAGCTCTGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	8748072	8433698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_8433858_8484426_8484538_8515250_8515344_8518203_8518357_8533617_8533690_8535660_8535778_8624948_8624988_8653428_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030
ENSMUSG00000025909.17_8433699_8853071_1	chr1	-	1115	13	NNC	ENSMUSG00000025909.17	novel	1554	17	NA	NA	21096	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGAGCTCTGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	8853071	8433698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_8433858_8533617_8533690_8535660_8535778_8624948_8624988_8653428_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160_8748200_8749296_8749355_8752196_8752254_8852986
ENSMUSG00000025909.17_8433699_8853123_2	chr1	-	1171	12	NNC	ENSMUSG00000025909.17	novel	1554	17	NA	NA	21044	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGAGCTCTGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	8853123	8433698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_8433858_8533617_8533690_8535660_8535778_8653390_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160_8748205_8749296_8749355_8752196_8752254_8852986
ENSMUSG00000025909.17_8433699_8853123_3	chr1	-	1166	13	NNC	ENSMUSG00000025909.17	novel	1554	17	NA	NA	21044	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGAGCTCTGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	8853123	8433698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_8433858_8533617_8533690_8535660_8535778_8624948_8624988_8653428_8653559_8665635_8665767_8677293_8677377_8695002_8695100_8748030_8748073_8748160_8748205_8749296_8749355_8752196_8752254_8852986
ENSMUSG00000025909.17_8433699_8853123_4	chr1	-	1167	13	NNC	ENSMUSG00000025909.17	novel	1554	17	NA	NA	21044	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGAGCTCTGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	8853123	8433698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_8433858_8533617_8533690_8535660_8535778_8624948_8624988_8653428_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160_8748205_8749296_8749355_8752196_8752249_8852986
ENSMUSG00000025909.17_8433699_8853123_5	chr1	-	1166	13	NNC	ENSMUSG00000025909.17	novel	1554	17	NA	NA	21044	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGAGCTCTGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	8853123	8433698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_8433858_8533617_8533690_8535660_8535778_8624948_8624988_8653428_8653559_8665635_8665767_8677293_8677377_8695008_8695106_8748030_8748073_8748160_8748205_8749296_8749355_8752196_8752254_8852986
ENSMUSG00000025909.17_8433699_8874171_1	chr1	-	1191	13	NNC	ENSMUSG00000025909.17	novel	1554	17	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGAGCTCTGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	8874171	8433698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_8433858_8533617_8533690_8535660_8535803_8653424_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160_8748205_8749296_8749355_8752196_8752254_8852986_8853122_8874140
ENSMUSG00000025909.17_8433699_8874171_2	chr1	-	1201	14	FSM	ENSMUSG00000025909.17	ENST00000642826.1	1197	14	8	-12	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGAGCTCTGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	8874171	8433698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_8433858_8533617_8533690_8535660_8535778_8624948_8624988_8653428_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160_8748205_8749296_8749355_8752196_8752254_8852986_8853122_8874140
ENSMUSG00000025909.17_8433809_8748177_1	chr1	-	1140	13	ISM	ENSMUSG00000025909.17	ENSMUST00000115488.3	1554	17	125990	110	125990	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCTGCCAAAGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	8748177	8433808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_8433858_8484426_8484538_8515250_8515344_8518203_8518357_8533617_8533690_8535660_8535778_8624948_8624988_8653428_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160
ENSMUSG00000025909.17_8433825_8665696_1	chr1	-	581	6	ISM	ENSMUSG00000025909.17	ENST00000643740.1	1756	14	208483	544	208471	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTATTCATTCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	8665696	8433824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_8433858_8484426_8484538_8515250_8515344_8518203_8518357_8653428_8653559_8665635
ENSMUSG00000025909.17_8484426_8749356_1	chr1	-	1169	12	NNC	ENSMUSG00000025909.17	novel	1444	16	NA	NA	124811	30796	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACACAAGAAACCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	8749356	8484425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_8484538_8515250_8515344_8518203_8518357_8533617_8533690_8535660_8535803_8653424_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160_8748205_8749296
ENSMUSG00000025909.17_8484426_8752253_1	chr1	-	1231	14	ISM	ENSMUSG00000025909.17	ENSMUST00000132064.8	4165	20	616545	52727	121914	30796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACACAAGAAACCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	8752253	8484425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_8484538_8515250_8515344_8518203_8518357_8533617_8533690_8535660_8535778_8624948_8624988_8653428_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160_8748202_8749296_8749355_8752196
ENSMUSG00000025909.17_8484476_8677338_1	chr1	-	614	6	ISM	ENSMUSG00000025909.17	ENST00000643740.1	1756	14	196841	51195	196829	30746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAATTTCTGTTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	8677338	8484475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_8484538_8515250_8515344_8518203_8518357_8653428_8653559_8665635_8665767_8677293
ENSMUSG00000025909.17_8515250_8874171_1	chr1	-	1151	14	NIC	ENSMUSG00000025909.17	novel	4165	20	NA	NA	-4	-28	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGCATCAGGTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	8874171	8515249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_-_8515344_8518203_8518357_8533617_8533690_8535660_8535778_8624948_8624988_8653428_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160_8748202_8749296_8749355_8752196_8752254_8874140
ENSMUSG00000025909.17_8518257_8748197_1	chr1	-	626	7	ISM	ENSMUSG00000025909.17	ENST00000643740.1	1756	14	125982	84976	125970	-3035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGGAACGAGCCTTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	8748197	8518256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_8518357_8653428_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160
ENSMUSG00000025909.17_8518287_8752240_1	chr1	-	486	8	ISM	ENSMUSG00000025909.17	ENST00000644093.1	1537	13	121939	85006	121927	-3065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGTGGAGCTAGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	8752240	8518286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_8518357_8533617_8533690_8535660_8535778_8624948_8624988_8748030_8748073_8748160_8748205_8749296_8749355_8752196
ENSMUSG00000025909.17_8533617_8853071_1	chr1	-	515	8	ISM	ENSMUSG00000025909.17	ENST00000644093.1	1537	13	21108	100336	21096	-18395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGCAGTAAGGACAAGC	NA	NA	NA	NA	NA	NA	NA	NA	8853071	8533616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_8533690_8535660_8535778_8624948_8624988_8748030_8748073_8748160_8748205_8749296_8749355_8752196_8752254_8852986
ENSMUSG00000025912.17_9741921_9743380_1	chr1	-	340	4	ISM	ENSMUSG00000025912.17	ENST00000517885.5	1703	12	27244	1837	26869	-1837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAACTTGACTCCTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	9743380	9741920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_9741984_9742436_9742542_9742764_9742882_9743325
ENSMUSG00000025912.17_9741968_9743440_1	chr1	-	353	4	ISM	ENSMUSG00000025912.17	ENST00000517885.5	1703	12	27184	1884	26809	-1884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACATCTTTATTAATGATA	NA	NA	NA	NA	NA	NA	NA	NA	9743440	9741967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_9741984_9742436_9742542_9742764_9742882_9743325
ENSMUSG00000025912.17_9742498_9744017_1	chr1	-	324	4	ISM	ENSMUSG00000025912.17	ENSMUST00000115468.9	2493	15	26232	2736	26232	-2414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCTGGGACAAAGAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	9744017	9742497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_9742542_9742764_9742882_9743325_9743441_9743969
ENSMUSG00000025912.17_9742838_9746247_1	chr1	-	358	4	ISM	ENSMUSG00000025912.17	ENSMUST00000115468.9	2493	15	24002	3076	24002	-2754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGAAACTGGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	9746247	9742837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_9742882_9743325_9743441_9743969_9744113_9746191
ENSMUSG00000025912.17_9743399_9758007_1	chr1	-	344	4	NNC	ENSMUSG00000025912.17	novel	1703	12	NA	NA	12242	-3315	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGAACTCCTACTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	9758007	9743398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_9743441_9743969_9744113_9746191_9746315_9757971
ENSMUSG00000025912.17_9743970_9760403_1	chr1	-	399	4	NNC	ENSMUSG00000025912.17	novel	1703	12	NA	NA	9846	-3886	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTCTGTATTAAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	9760403	9743969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_9744113_9746191_9746315_9757971_9758007_9760305
ENSMUSG00000025912.17_9746265_9763619_2	chr1	-	358	5	NNC	ENSMUSG00000025912.17	novel	1703	12	NA	NA	6630	-6181	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTAGCGAAGTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	9763619	9746264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_9746315_9757971_9758007_9760305_9760399_9762942_9763015_9763511
ENSMUSG00000025912.17_9760304_9770249_1	chr1	-	363	4	ISM	ENSMUSG00000025912.17	ENSMUST00000115468.9	2493	15	0	20542	0	-20220	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATTCATATTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	9770249	9760303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_9760399_9762942_9763015_9763511_9763618_9770159
ENSMUSG00000025912.17_9763511_9770434_1	chr1	-	382	2	ISM	ENSMUSG00000025912.17	ENST00000517885.5	1703	12	190	23427	0	-23427	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGCCTGGGAAGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	9770434	9763510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_9763618_9770159
ENSMUSG00000025917.10_10095068_10097476_1	chr1	-	370	2	ISM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	10876	242	10876	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCACGTGAAATTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	10097476	10095067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_10095289_10097327
ENSMUSG00000025917.10_10097423_10105169_1	chr1	-	463	6	ISM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	3183	2597	3183	-2597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGAAGCCCAACTGGGACG	NA	NA	NA	NA	NA	NA	NA	NA	10105169	10097422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153
ENSMUSG00000025917.10_10100912_10105353_1	chr1	-	505	5	ISM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	2999	6086	2999	-6086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAATCATCTTTGGATC	NA	NA	NA	NA	NA	NA	NA	NA	10105353	10100911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153
ENSMUSG00000025917.10_10103521_10107952_1	chr1	-	450	4	ISM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	400	8695	400	-8695	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTGAATCTTGGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	10107952	10103520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_10103549_10104232_10104362_10105153_10105389_10107894
ENSMUSG00000025921.8_16175998_16201430_1	chr1	+	1146	5	ISM	ENSMUSG00000025921.8	ENSMUST00000027053.8	3587	6	0	2528	0	-2528	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGAGGGCCCGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	16175997	16201430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_16176531_16178018_16178255_16198388_16198488_16199419_16199566_16201298
ENSMUSG00000025921.8_16176148_16201644_1	chr1	+	1123	6	FSM	ENSMUSG00000025921.8	ENSMUST00000027053.8	3587	6	150	2314	150	-2314	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGTACGGAGTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	16176147	16201644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_16176531_16178018_16178255_16198388_16198488_16199419_16199566_16201298_16201431_16201517
ENSMUSG00000025921.8_16176351_16201846_1	chr1	+	1122	6	FSM	ENSMUSG00000025921.8	ENSMUST00000027053.8	3587	6	353	2112	353	-2112	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCCTAAAAATGAGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	16176350	16201846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_16176531_16178018_16178255_16198388_16198488_16199419_16199566_16201298_16201431_16201517
ENSMUSG00000025921.8_16178124_16202127_1	chr1	+	1118	5	ISM	ENSMUSG00000025921.8	ENSMUST00000027053.8	3587	6	2126	1831	2126	-1831	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCACCAGTCTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	16178123	16202127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_16178255_16198388_16198488_16199419_16199566_16201298_16201431_16201517
ENSMUSG00000025921.8_16178162_16202213_1	chr1	+	1166	5	ISM	ENSMUSG00000025921.8	ENSMUST00000027053.8	3587	6	2164	1745	2164	-1745	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGACCTGGTTAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	16178161	16202213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_16178255_16198388_16198488_16199419_16199566_16201298_16201431_16201517
ENSMUSG00000025921.8_16199467_16202408_1	chr1	+	1122	3	ISM	ENSMUSG00000025921.8	ENSMUST00000027053.8	3587	6	23469	1550	23469	-1550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGCTTGGGGAGCAAATC	NA	NA	NA	NA	NA	NA	NA	NA	16199466	16202408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_16199566_16201298_16201431_16201517
ENSMUSG00000025921.8_16201347_16202557_1	chr1	+	1124	2	ISM	ENSMUSG00000025921.8	ENSMUST00000027053.8	3587	6	25349	1401	25349	-1401	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTAGTGAAACATTGT	NA	NA	NA	NA	NA	NA	NA	NA	16201346	16202557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_16201431_16201517
ENSMUSG00000025921.8_16201393_16202626_1	chr1	+	1147	2	ISM	ENSMUSG00000025921.8	ENSMUST00000027053.8	3587	6	25395	1332	25395	-1332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATGAACTACTATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	16201392	16202626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_16201431_16201517
ENSMUSG00000025935.11_13635703_13640262_1	chr1	-	1179	3	ISM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	19872	781	19872	-781	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCCCTTTTTGATATGTT	NA	NA	NA	NA	NA	NA	NA	NA	13640262	13635702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_13636621_13639694_13639856_13640162
ENSMUSG00000025935.11_13635891_13646617_1	chr1	-	1237	6	ISM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	13517	969	13517	-969	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTTACATCCCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	13646617	13635890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591
ENSMUSG00000025935.11_13635979_13646650_1	chr1	-	1182	6	ISM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	13484	1057	13484	-1057	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAATTTTTTGTAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	13646650	13635978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591
ENSMUSG00000025935.11_13636122_13649790_1	chr1	-	1241	8	ISM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	10344	1200	10344	-1200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTCACCAATTTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	13649790	13636121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673
ENSMUSG00000025935.11_13636270_13651310_1	chr1	-	1279	10	ISM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	8824	1348	8824	-1348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTGGGTTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	13651310	13636269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246
ENSMUSG00000025935.11_13636448_13659910_1	chr1	-	1188	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	224	1526	224	-1526	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATTTCTGCTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	13659910	13636447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ENSMUSG00000025935.11_13636512_13659976_1	chr1	-	1190	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	158	1590	158	-1590	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTTTCTGCTCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	13659976	13636511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ENSMUSG00000025935.11_13636568_13660099_1	chr1	-	1257	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	35	1646	35	-1646	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAGAGAAGTCTTCGTA	NA	NA	NA	NA	NA	NA	NA	NA	13660099	13636567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ENSMUSG00000025937.7_13696301_13700372_1	chr1	-	994	3	ISM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	30398	2747	30398	-2747	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCAAGTTTATTTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	13700372	13696300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_13697129_13697579_13697662_13700288
ENSMUSG00000025937.7_13696378_13700437_1	chr1	-	982	3	ISM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	30333	2824	30333	-2824	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTAGCTACTTCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	13700437	13696377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_13697129_13697579_13697662_13700288
ENSMUSG00000025937.7_13696578_13717640_1	chr1	-	993	5	ISM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	13130	3024	13130	-3024	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCCAGAACAAGACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	13717640	13696577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608
ENSMUSG00000025937.7_13696728_13721007_1	chr1	-	1001	6	ISM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	9763	3174	9763	-3174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCAGCTCTTATAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	13721007	13696727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944
ENSMUSG00000025937.7_13696797_13721066_1	chr1	-	991	6	ISM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	9704	3243	9704	-3243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAAACCAGTTAATACT	NA	NA	NA	NA	NA	NA	NA	NA	13721066	13696796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944
ENSMUSG00000025937.7_13696922_13730663_1	chr1	-	1019	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	107	3368	107	-3368	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAGGACAGGTTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	13730663	13696921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ENSMUSG00000025937.7_13696986_13730770_1	chr1	-	1062	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	0	3432	0	-3432	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATAACCCTTGATAC	NA	NA	NA	NA	NA	NA	NA	NA	13730770	13696985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ENSMUSG00000025938.17_12941886_13059948_1	chr1	-	1823	8	FSM	ENSMUSG00000025938.17	ENST00000530307.1	2607	8	783	1	783	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAGGAGCTTAGCTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	13059948	12941885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_12942553_12946533_12946599_12949361_12949604_12951516_12951677_12964650_12964850_13009212_13009425_13014203_13014337_13059803
ENSMUSG00000025938.17_12941960_13060036_1	chr1	-	1837	8	FSM	ENSMUSG00000025938.17	ENST00000530307.1	2607	8	695	75	695	-75	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTATACACAGCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	13060036	12941959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_12942553_12946533_12946599_12949361_12949604_12951516_12951677_12964650_12964850_13009212_13009425_13014203_13014337_13059803
ENSMUSG00000025938.17_12942069_13060138_1	chr1	-	1830	8	FSM	ENSMUSG00000025938.17	ENST00000530307.1	2607	8	593	184	593	-184	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGACAGATGGATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	13060138	12942068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_12942553_12946533_12946599_12949361_12949604_12951516_12951677_12964650_12964850_13009212_13009425_13014203_13014337_13059803
ENSMUSG00000025938.17_12946546_13060636_1	chr1	-	1832	7	ISM	ENSMUSG00000025938.17	ENST00000530307.1	2607	8	95	4661	95	2273	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAACACTTGGTATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	13060636	12946545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_12946599_12949361_12949604_12951516_12951677_12964650_12964850_13009212_13009425_13014203_13014337_13059803
ENSMUSG00000025939.20_16640006_16689713_1	chr1	-	2173	6	NNC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGTTTCTATGACAATG	NA	NA	NA	NA	NA	NA	NA	NA	16689713	16640005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_16641507_16652158_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ENSMUSG00000025940.7_16735431_16747314_1	chr1	+	528	3	FSM	ENSMUSG00000025940.7	ENSMUST00000065373.6	1710	3	-3	1185	0	-1105	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTTCACAGTGATCACT	NA	NA	NA	NA	NA	NA	NA	NA	16735430	16747314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_16735730_16737891_16737998_16747191
ENSMUSG00000025940.7_16735564_16748237_1	chr1	+	1318	3	FSM	ENSMUSG00000025940.7	ENSMUST00000065373.6	1710	3	130	262	130	-182	multi-exon	FALSE	canonical	NA	NA	NA	NA	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTAAGAGCACTGGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	16735563	16748237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_16735730_16737891_16737998_16747191
ENSMUSG00000025940.7_16737888_16748419_1	chr1	+	1338	2	ISM	ENSMUSG00000025940.7	ENSMUST00000177501.2	1636	3	2457	0	2454	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTATGTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	16737887	16748419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_16737998_16747191
ENSMUSG00000025949.17_65229495_65258941_1	chr1	+	780	6	ISM	ENSMUSG00000025949.17	ENST00000392202.7	1728	9	20	4918	20	-4656	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	721	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATCTGCCATCACACCA	NA	NA	NA	NA	NA	NA	NA	NA	65229494	65258941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_65229659_65231303_65231454_65241874_65242083_65244747_65244838_65255092_65255232_65258912
ENSMUSG00000025949.17_65229539_65259001_1	chr1	+	796	6	ISM	ENSMUSG00000025949.17	ENST00000392202.7	1728	9	64	4858	64	-4596	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	863	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCCAACTGCATTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	65229538	65259001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_65229659_65231303_65231454_65241874_65242083_65244747_65244838_65255092_65255232_65258912
ENSMUSG00000025949.17_65229545_65244865_1	chr1	+	623	5	ISM	ENSMUSG00000025949.17	ENST00000308862.10	1499	10	70	18732	70	-18732	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTTTATTTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	65229544	65244865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_65229659_65231303_65231454_65231692_65231726_65241874_65242083_65244747
ENSMUSG00000025949.17_65229610_65259034_1	chr1	+	758	6	ISM	ENSMUSG00000025949.17	ENST00000392202.7	1728	9	135	4825	135	-4563	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTGGCTAATCAGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	65229609	65259034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_65229659_65231303_65231454_65241874_65242083_65244747_65244838_65255092_65255232_65258912
ENSMUSG00000025949.17_65229619_65255116_1	chr1	+	545	6	ISM	ENSMUSG00000025949.17	ENST00000308862.10	1499	10	144	8481	144	-8481	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGATCGGTCTGGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	65229618	65255116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_65229659_65231303_65231454_65231692_65231726_65241874_65242083_65244747_65244838_65255092
ENSMUSG00000025949.17_65231302_65261458_1	chr1	+	777	6	ISM	ENSMUSG00000025949.17	ENST00000392202.7	1728	9	1827	2401	1827	-2139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	899	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGATGGACGTTGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	65231301	65261458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_65231454_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428
ENSMUSG00000025949.17_65231395_65258986_1	chr1	+	603	6	ISM	ENSMUSG00000025949.17	ENST00000308862.10	1499	10	1920	4611	1920	-4611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGGTTGAGAACACATC	NA	NA	NA	NA	NA	NA	NA	NA	65231394	65258986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_65231454_65231692_65231726_65241874_65242083_65244747_65244838_65255092_65255232_65258912
ENSMUSG00000025949.17_65231423_65262683_1	chr1	+	758	7	ISM	ENSMUSG00000025949.17	ENST00000392202.7	1728	9	1948	1176	1948	-914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCTCCAGACAGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	65231422	65262683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_65231454_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663
ENSMUSG00000025949.17_65241936_65263358_1	chr1	+	832	7	ISM	ENSMUSG00000025949.17	ENST00000308862.10	1499	10	12461	239	12461	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTCCACAGTGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	65241935	65263358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320
ENSMUSG00000025949.17_65242005_65263391_1	chr1	+	796	7	ISM	ENSMUSG00000025949.17	ENST00000308862.10	1499	10	12530	206	12530	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCAGCCTGAACGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	65242004	65263391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320
ENSMUSG00000025949.17_65242060_65263444_1	chr1	+	794	7	ISM	ENSMUSG00000025949.17	ENST00000308862.10	1499	10	12585	153	12585	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAGTACCCACATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	65242059	65263444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320
ENSMUSG00000025949.17_65244793_65263547_1	chr1	+	829	6	ISM	ENSMUSG00000025949.17	ENST00000308862.10	1499	10	15318	50	15318	-50	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCAGCCTGTCCTCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	65244792	65263547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320
ENSMUSG00000025949.17_65261427_65263859_1	chr1	+	801	3	ISM	ENSMUSG00000025949.17	ENST00000392202.7	1728	9	31952	0	31952	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTGTAACAACAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	65261426	65263859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_65261541_65262663_65262812_65263320
ENSMUSG00000025950.17_65198088_65207723_1	chr1	-	1327	6	ISM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	10617	313	10617	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCAATATACTAGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	65207723	65198087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657
ENSMUSG00000025950.17_65198153_65207763_1	chr1	-	1302	6	ISM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	10577	378	10577	-376	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGAACAGATAGGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	65207763	65198152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657
ENSMUSG00000025950.17_65198223_65200372_1	chr1	-	656	2	ISM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	17968	448	17968	-446	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACACTGGGGCCTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	65200372	65198222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_65198715_65200208
ENSMUSG00000025950.17_65198446_65214411_1	chr1	-	1323	8	ISM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	3929	671	3929	-669	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCACCTTAATGAATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	65214411	65198445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389
ENSMUSG00000025950.17_65198554_65205335_1	chr1	-	687	5	ISM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	13005	779	13005	-777	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTAACACTCAAGATTA	NA	NA	NA	NA	NA	NA	NA	NA	65205335	65198553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265
ENSMUSG00000025950.17_65198631_65205360_1	chr1	-	635	5	ISM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	12980	856	12980	-854	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAAGGTCAAACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	65205360	65198630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265
ENSMUSG00000025950.17_65198635_65225597_1	chr1	-	1384	9	FSM	ENSMUSG00000025950.17	ENSMUST00000169032.8	2283	9	41	858	41	-858	multi-exon	FALSE	canonical	NA	NA	NA	NA	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACTTTAAGGTCAAACC	NA	NA	NA	NA	NA	NA	NA	NA	65225597	65198634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65225463
ENSMUSG00000025950.17_65204257_65210409_1	chr1	-	730	4	ISM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	7931	6482	7931	-6480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAACAAATGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	65210409	65204256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_65204411_65205265_65205444_65207657_65207764_65210117
ENSMUSG00000025950.17_65204379_65214426_1	chr1	-	645	5	ISM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	3914	6604	3914	-6602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTATGAACACAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	65214426	65204378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389
ENSMUSG00000025950.17_65205403_65218215_1	chr1	-	644	5	ISM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	125	7628	125	-7626	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTGAAGACTTTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	65218215	65205402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148
ENSMUSG00000025950.17_65207748_65218340_1	chr1	-	638	4	ISM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	0	9973	0	-9971	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTCCTGGGCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	65218340	65207747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_65207764_65210117_65210410_65214389_65214528_65218148
ENSMUSG00000025956.11_64646860_64654369_1	chr1	-	550	2	ISM	ENSMUSG00000025956.11	ENSMUST00000053469.2	2666	3	1958	1221	1958	-1221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTACAGCTAGAACTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	64654369	64646859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_64647297_64654256
ENSMUSG00000025956.11_64646970_64655603_1	chr1	-	611	3	FSM	ENSMUSG00000025956.11	ENSMUST00000053469.2	2666	3	724	1331	724	-1331	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTACGATCCTGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	64655603	64646969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_64647297_64654256_64654369_64655431
ENSMUSG00000025962.16_63769773_63793666_1	chr1	+	4338	12	FSM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	0	148	0	-148	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGTATGAGGATAATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	63769772	63793666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ENSMUSG00000025964.16_63485370_63594386_1	chr1	+	1552	16	ISM	ENSMUSG00000025964.16	ENST00000374415.7	2661	26	0	37606	0	-37606	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTATAAGAGACTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	63485369	63594386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574299_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313
ENSMUSG00000025964.16_63485497_63595026_1	chr1	+	1478	17	ISM	ENSMUSG00000025964.16	ENST00000374415.7	2661	26	127	36966	127	-36966	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGACGGCCCCTGCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	63485496	63595026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574299_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972
ENSMUSG00000025964.16_63486886_63602619_1	chr1	+	1573	18	ISM	ENSMUSG00000025964.16	ENST00000374415.7	2661	26	1516	29373	1516	-29373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGGGCTCTAAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	63486885	63602619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574299_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567
ENSMUSG00000025964.16_63487061_63605781_1	chr1	+	1482	20	ISM	ENSMUSG00000025964.16	ENST00000374415.7	2661	26	1691	26211	1691	-26211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGCTATGAAAAGCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	63487060	63605781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574299_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760
ENSMUSG00000025964.16_63554736_63607127_1	chr1	+	1563	19	ISM	ENSMUSG00000025964.16	ENST00000374415.7	2661	26	69366	24865	69366	-24865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACAGATAGAAGTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	63554735	63607127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574299_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007
ENSMUSG00000025964.16_63567979_63610120_1	chr1	+	1489	19	ISM	ENSMUSG00000025964.16	ENST00000374415.7	2661	26	82609	21872	82609	-21872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGACTCCGTGTGGCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	63567978	63610120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63568000_63569393_63569458_63573444_63573518_63574299_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068
ENSMUSG00000025964.16_63569394_63610239_1	chr1	+	1587	18	ISM	ENSMUSG00000025964.16	ENST00000374415.7	2661	26	84024	21753	84024	-21753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAGTAAACAGCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	63569393	63610239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63569458_63573444_63573518_63574299_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068
ENSMUSG00000025964.16_63573443_63610239_1	chr1	+	1525	17	ISM	ENSMUSG00000025964.16	ENST00000374415.7	2661	26	88073	21753	88073	-21753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAGTAAACAGCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	63573442	63610239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63573518_63574299_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068
ENSMUSG00000025964.16_63574300_63612157_1	chr1	+	1560	17	ISM	ENSMUSG00000025964.16	ENST00000374415.7	2661	26	88930	19835	88930	-19835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTATGATTCCGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	63574299	63612157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045
ENSMUSG00000025964.16_63582277_63620386_1	chr1	+	1518	16	ISM	ENSMUSG00000025964.16	ENST00000374415.7	2661	26	96907	11606	96907	-11606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCATACCGAGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	63582276	63620386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63620295
ENSMUSG00000025964.16_63584676_63631964_1	chr1	+	1557	16	ISM	ENSMUSG00000025964.16	ENST00000374415.7	2661	26	99306	28	99306	-28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGACAAAGGTCCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	63584675	63631964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63620295_63620387_63631766
ENSMUSG00000025967.17_63215984_63219081_1	chr1	+	1375	6	FSM	ENSMUSG00000025967.17	ENSMUST00000129339.8	1939	6	0	564	0	266	multi-exon	FALSE	canonical	NA	NA	NA	NA	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGCTGTTAGCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	63215983	63219081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ENSMUSG00000025967.17_63216129_63219224_1	chr1	+	1373	6	FSM	ENSMUSG00000025967.17	ENSMUST00000129339.8	1939	6	145	421	145	409	multi-exon	FALSE	canonical	NA	NA	NA	NA	2119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAGAGCGAAACTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	63216128	63219224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ENSMUSG00000025967.17_63216129_63219224_2	chr1	+	1368	6	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	145	409	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAGAGCGAAACTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	63216128	63219224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_63216451_63216912_63217036_63217597_63217725_63217995_63218058_63218406_63218533_63218616
ENSMUSG00000025967.17_63216382_63219455_1	chr1	+	1351	6	FSM	ENSMUSG00000025967.17	ENSMUST00000129339.8	1939	6	398	190	93	-190	multi-exon	FALSE	canonical	NA	NA	NA	NA	2480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATCACAGGGCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	63216381	63219455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ENSMUSG00000025967.17_63216947_63219645_1	chr1	+	1438	5	ISM	ENSMUSG00000025967.17	ENSMUST00000129339.8	1939	6	963	0	658	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACAGCAGTTTCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	63216946	63219645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ENSMUSG00000025967.17_63216965_63219645_1	chr1	+	1415	5	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	676	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACAGCAGTTTCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	63216964	63219645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_63217036_63217597_63217725_63217995_63218058_63218406_63218533_63218616
ENSMUSG00000025968.17_63182894_63204019_1	chr1	-	1860	13	ISM	ENSMUSG00000025968.17	ENST00000432169.5	1951	15	6049	-52	6049	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2995	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTAAAGTTATACTAT	NA	NA	NA	NA	NA	NA	NA	NA	63204019	63182893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888
ENSMUSG00000025968.17_63183054_63204131_1	chr1	-	1724	14	ISM	ENSMUSG00000025968.17	ENST00000432169.5	1951	15	5937	108	5937	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2446	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAGTGTGTCAAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	63204131	63183053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107
ENSMUSG00000025968.17_63186279_63205526_1	chr1	-	1831	14	ISM	ENSMUSG00000025968.17	ENST00000423725.5	2274	17	4542	3471	4542	-3333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2742	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTGACTGCTACCTA	NA	NA	NA	NA	NA	NA	NA	NA	63205526	63186278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449
ENSMUSG00000025968.17_63186522_63209258_1	chr1	-	1735	14	ISM	ENSMUSG00000025968.17	ENST00000440274.5	2258	17	810	3714	810	-3576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCTAATCTGGTTCGAT	NA	NA	NA	NA	NA	NA	NA	NA	63209258	63186521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63209208
ENSMUSG00000025968.17_63187555_63210075_1	chr1	-	1783	14	ISM	ENSMUSG00000025968.17	ENST00000440274.5	2258	17	-7	4747	-7	-4609	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTATTTTTGAGGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	63210075	63187554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63209208_63209301_63210007
ENSMUSG00000025968.17_63189115_63208495_1	chr1	-	1556	12	ISM	ENSMUSG00000025968.17	ENST00000423725.5	2274	17	1573	6307	1573	-6169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	763	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGCAACTTGGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	63208495	63189114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387
ENSMUSG00000025968.17_63189225_63209300_1	chr1	-	1538	13	ISM	ENSMUSG00000025968.17	ENSMUST00000168099.9	2590	19	6591	6331	768	-6279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGAAGCGATTAGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	63209300	63189224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208
ENSMUSG00000025968.17_63190705_63210073_1	chr1	-	1563	13	ISM	ENSMUSG00000025968.17	ENSMUST00000168099.9	2590	19	5818	7811	-5	-7759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTGTTTTTTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	63210073	63190704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007
ENSMUSG00000025968.17_63190811_63215822_1	chr1	-	1535	14	ISM	ENSMUSG00000025968.17	ENSMUST00000027111.15	2661	19	159	8056	69	-7865	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAGCAGCAATTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	63215822	63190810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
ENSMUSG00000025968.17_63195363_63215952_1	chr1	-	1475	12	ISM	ENSMUSG00000025968.17	ENSMUST00000027111.15	2661	19	29	12608	29	-12417	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTTAATCCTTATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	63215952	63195362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
ENSMUSG00000025968.17_63198992_63210039_1	chr1	-	598	6	ISM	ENSMUSG00000025968.17	ENST00000432169.5	1951	15	29	16046	29	-16046	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGAACCAATGGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	63210039	63198991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63210007
ENSMUSG00000025969.16_62758209_62786389_1	chr1	+	700	5	ISM	ENSMUSG00000025969.16	ENSMUST00000027112.13	4216	16	15348	49751	124	-49751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTGATGGGAGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	62758208	62786389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_62758267_62777447_62777630_62783333_62783565_62784516_62784673_62786316
ENSMUSG00000025969.16_62777558_62788356_1	chr1	+	694	5	ISM	ENSMUSG00000025969.16	ENSMUST00000027112.13	4216	16	34697	47784	19473	-47784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAAGGCTACTACGTCA	NA	NA	NA	NA	NA	NA	NA	NA	62777557	62788356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291
ENSMUSG00000025969.16_62783500_62800067_1	chr1	+	681	5	ISM	ENSMUSG00000025969.16	ENSMUST00000027112.13	4216	16	40639	36073	25415	-36073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGTCACAGGTGAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	62783499	62800067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933
ENSMUSG00000025969.16_62784568_62801960_1	chr1	+	687	5	ISM	ENSMUSG00000025969.16	ENSMUST00000027112.13	4216	16	41707	34180	26483	-34180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTAGCCGCTCTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	62784567	62801960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849
ENSMUSG00000025969.16_62788288_62802199_1	chr1	+	655	3	ISM	ENSMUSG00000025969.16	ENSMUST00000027112.13	4216	16	45427	33941	30203	-33941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTCATTTCCCAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	62788287	62802199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_62788448_62799933_62800079_62801849
ENSMUSG00000025969.16_62802022_62822549_1	chr1	+	678	5	ISM	ENSMUSG00000025969.16	ENSMUST00000027112.13	4216	16	59161	13591	43937	-13591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGGAGTTCCAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	62802021	62822549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452
ENSMUSG00000025969.16_62802087_62822629_1	chr1	+	693	5	ISM	ENSMUSG00000025969.16	ENSMUST00000027112.13	4216	16	59226	13511	44002	-13511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGGGTCATCCGT	NA	NA	NA	NA	NA	NA	NA	NA	62802086	62822629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452
ENSMUSG00000025969.16_62802139_62822681_1	chr1	+	693	5	ISM	ENSMUSG00000025969.16	ENSMUST00000027112.13	4216	16	59278	13459	44054	-13459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATCCTGCCCAGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	62802138	62822681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452
ENSMUSG00000025969.16_62808155_62854508_1	chr1	+	664	5	ISM	ENSMUSG00000025969.16	ENST00000412873.2	2665	14	50070	288	50070	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCAACTCTTCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	62808154	62854508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_62808276_62810863_62811005_62822452_62822716_62824203_62824326_62854491
ENSMUSG00000025969.16_62808219_62854567_1	chr1	+	659	5	ISM	ENSMUSG00000025969.16	ENST00000412873.2	2665	14	50134	229	50134	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCTGTACACCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	62808218	62854567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_62808276_62810863_62811005_62822452_62822716_62824203_62824326_62854491
ENSMUSG00000025969.16_62810954_62854691_1	chr1	+	636	4	ISM	ENSMUSG00000025969.16	ENST00000412873.2	2665	14	52869	105	52869	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCGAGGAGCTGCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	62810953	62854691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_62811005_62822452_62822716_62824203_62824326_62854491
ENSMUSG00000025969.16_62822449_62854796_1	chr1	+	694	3	ISM	ENSMUSG00000025969.16	ENST00000412873.2	2665	14	64364	0	64364	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATTGTGTCTGGATCGCT	NA	NA	NA	NA	NA	NA	NA	NA	62822448	62854796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_62822716_62824203_62824326_62854491
ENSMUSG00000025971.7_57445918_57455482_1	chr1	+	1479	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	431	1630	431	-1630	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAATGTGGCACATAAA	NA	NA	NA	NA	NA	NA	NA	NA	57445917	57455482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
ENSMUSG00000025971.7_57446157_57455779_1	chr1	+	1537	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	670	1333	670	-1333	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTATAAACAGATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	57446156	57455779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
ENSMUSG00000025971.7_57446233_57455812_1	chr1	+	1494	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	746	1300	746	-1300	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGAATTGCTAAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	57446232	57455812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
ENSMUSG00000025971.7_57449094_57455978_1	chr1	+	1488	4	ISM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	3607	1134	3607	-1134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATGGACTTAAAAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	57449093	57455978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_57449143_57450881_57451009_57452398_57452547_57454814
ENSMUSG00000025971.7_57450986_57456134_1	chr1	+	1491	3	ISM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	5499	978	5499	-978	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGACAGGTTGTGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	57450985	57456134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_57451009_57452398_57452547_57454814
ENSMUSG00000025971.7_57452494_57456269_1	chr1	+	1508	2	ISM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	7007	843	7007	-843	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAACACTAATTAATATAGC	NA	NA	NA	NA	NA	NA	NA	NA	57452493	57456269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_57452547_57454814
ENSMUSG00000025977.16_55308220_55399900_1	chr1	-	2427	10	NNC	ENSMUSG00000025977.16	novel	2440	10	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAACAAAGAATTCTGATA	NA	NA	NA	NA	NA	NA	NA	NA	55399900	55308219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_55309825_55339245_55339345_55343656_55343786_55344834_55344883_55362808_55362881_55379631_55379753_55385531_55385612_55388039_55388095_55394806_55394899_55399774
ENSMUSG00000025977.16_55308220_55399900_2	chr1	-	2430	10	FSM	ENSMUSG00000025977.16	ENST00000321801.11	2440	10	11	-1	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAACAAAGAATTCTGATA	NA	NA	NA	NA	NA	NA	NA	NA	55399900	55308219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_55309825_55339245_55339345_55343656_55343786_55344834_55344883_55362808_55362881_55379631_55379760_55385535_55385612_55388039_55388095_55394806_55394899_55399774
ENSMUSG00000025977.16_55308220_55399900_3	chr1	-	2421	10	NNC	ENSMUSG00000025977.16	novel	2440	10	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAACAAAGAATTCTGATA	NA	NA	NA	NA	NA	NA	NA	NA	55399900	55308219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_55309825_55339245_55339345_55343656_55343786_55344843_55344883_55362808_55362881_55379631_55379760_55385535_55385612_55388039_55388095_55394806_55394899_55399774
ENSMUSG00000025977.16_55308220_55399900_4	chr1	-	2423	10	NNC	ENSMUSG00000025977.16	novel	2440	10	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAACAAAGAATTCTGATA	NA	NA	NA	NA	NA	NA	NA	NA	55399900	55308219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_55309825_55339245_55339345_55343656_55343786_55344834_55344876_55362808_55362881_55379631_55379760_55385535_55385612_55388039_55388095_55394806_55394899_55399774
ENSMUSG00000025977.16_55394850_55401733_1	chr1	-	286	3	ISM	ENSMUSG00000025977.16	ENSMUST00000114423.7	1106	10	152	55622	152	-9434	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTGAAGATTGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	55401733	55394849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55394899_55399774_55399919_55401640
ENSMUSG00000025978.15_55210786_55224162_1	chr1	-	510	2	ISM	ENSMUSG00000025978.15	ENSMUST00000027121.15	3677	9	41779	1468	41779	-1468	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGCATTCTTACATT	NA	NA	NA	NA	NA	NA	NA	NA	55224162	55210785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55211242_55224108
ENSMUSG00000025978.15_55210907_55234694_1	chr1	-	538	4	ISM	ENSMUSG00000025978.15	ENSMUST00000027121.15	3677	9	31247	1589	31247	-1589	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCTACTACTATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	55234694	55210906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55211242_55224108_55224188_55233402_55233507_55234674
ENSMUSG00000025978.15_55211079_55243392_1	chr1	-	519	5	ISM	ENSMUSG00000025978.15	ENSMUST00000027121.15	3677	9	22549	1761	22549	-1761	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGAGCGACAGCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	55243392	55211078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55211242_55224108_55224188_55233402_55233507_55234674_55234797_55243341
ENSMUSG00000025978.15_55211152_55243446_1	chr1	-	500	5	ISM	ENSMUSG00000025978.15	ENSMUST00000027121.15	3677	9	22495	1834	22495	-1834	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCCGAGCCCCTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	55243446	55211151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55211242_55224108_55224188_55233402_55233507_55234674_55234797_55243341
ENSMUSG00000025978.15_55211205_55243511_1	chr1	-	512	5	ISM	ENSMUSG00000025978.15	ENSMUST00000027121.15	3677	9	22430	1887	22430	-1887	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGTCAGCAGCAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	55243511	55211204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55211242_55224108_55224188_55233402_55233507_55234674_55234797_55243341
ENSMUSG00000025978.15_55243358_55250327_1	chr1	-	493	3	ISM	ENSMUSG00000025978.15	ENSMUST00000114428.3	2012	6	15614	2548	15614	-2548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAGACACCTAAAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	55250327	55243357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55243552_55245494_55245775_55250308
ENSMUSG00000025978.15_55243518_55253352_1	chr1	-	500	4	ISM	ENSMUSG00000025978.15	ENSMUST00000114428.3	2012	6	12589	2708	12589	-2708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAGGAAGATGCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	55253352	55243517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55243552_55245494_55245775_55250308_55250421_55253278
ENSMUSG00000025978.15_55245694_55265407_1	chr1	-	505	4	ISM	ENSMUSG00000025978.15	ENSMUST00000114428.3	2012	6	534	4884	534	-4884	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCCACGATGGAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	55265407	55245693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55245775_55250308_55250421_55253278_55253463_55265279
ENSMUSG00000025978.15_55245750_55265467_1	chr1	-	509	4	ISM	ENSMUSG00000025978.15	ENSMUST00000114428.3	2012	6	474	4940	474	-4940	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTGTTGGGCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	55265467	55245749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55245775_55250308_55250421_55253278_55253463_55265279
ENSMUSG00000025978.15_55253306_55265622_1	chr1	-	500	2	ISM	ENSMUSG00000025978.15	ENSMUST00000114428.3	2012	6	319	12496	319	-12496	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGTGCTGTCCCGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	55265622	55253305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55253463_55265279
ENSMUSG00000025978.15_55253350_55265684_1	chr1	-	518	2	ISM	ENSMUSG00000025978.15	ENSMUST00000114428.3	2012	6	257	12540	257	-12540	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGGGGCAGCGGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	55265684	55253349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55253463_55265279
ENSMUSG00000025979.14_55170390_55191942_1	chr1	+	724	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	0	2116	0	-1155	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGGGGAAAGTGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	55170389	55191942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ENSMUSG00000025979.14_55187472_55192158_1	chr1	+	653	5	ISM	ENSMUSG00000025979.14	ENSMUST00000159311.8	1816	7	17082	939	17082	-939	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTCATGGTTTTTAAATC	NA	NA	NA	NA	NA	NA	NA	NA	55187471	55192158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ENSMUSG00000025979.14_55187704_55192270_1	chr1	+	719	4	ISM	ENSMUSG00000025979.14	ENSMUST00000159311.8	1816	7	17314	827	17314	-827	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTATAAACGAATGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	55187703	55192270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_55187794_55189304_55189385_55190129_55190242_55191833
ENSMUSG00000025980.15_55116994_55118325_1	chr1	-	896	3	ISM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	8858	0	7778	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55118325	55116993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55117600_55117687_55117867_55118214
ENSMUSG00000025980.15_55116994_55126100_1	chr1	-	2265	10	FSM	ENSMUSG00000025980.15	ENST00000678621.1	2268	10	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55126100	55116993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924
ENSMUSG00000025980.15_55116994_55126103_1	chr1	-	2262	10	NNC	ENSMUSG00000025980.15	novel	2268	10	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	9830	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55126103	55116993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122231_55122322_55122883_55122967_55123691_55123945_55125924
ENSMUSG00000025980.15_55117209_55119365_1	chr1	-	850	4	ISM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	7818	215	6738	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGGGTGCAAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	55119365	55117208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260
ENSMUSG00000025980.15_55117366_55120246_1	chr1	-	849	5	ISM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	6937	372	5857	-372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACCTGGAGAAAATGACT	NA	NA	NA	NA	NA	NA	NA	NA	55120246	55117365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231
ENSMUSG00000025980.15_55117469_55120846_1	chr1	-	859	6	ISM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	6337	475	5257	-475	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGAGGCGGCATGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	55120846	55117468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818
ENSMUSG00000025980.15_55117513_55120904_1	chr1	-	873	6	ISM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	6279	519	5199	-519	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGACCCTGGAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	55120904	55117512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818
ENSMUSG00000025980.15_55117569_55120949_1	chr1	-	862	6	ISM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	6234	575	5154	-575	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCCTCCTTGCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	55120949	55117568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818
ENSMUSG00000025980.15_55120861_55126957_1	chr1	-	849	7	ISM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	226	3867	226	-3867	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGTTGACGGAGAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	55126957	55120860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ENSMUSG00000025980.15_55120913_55127007_1	chr1	-	847	7	ISM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	176	3919	176	-3919	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTCTTGAAATTGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	55127007	55120912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ENSMUSG00000025980.15_55120956_55127065_1	chr1	-	862	7	ISM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	118	3962	118	-3962	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTTGAGTGAAAAGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	55127065	55120955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ENSMUSG00000025980.15_55121215_55127183_1	chr1	-	950	6	ISM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	0	4221	0	-4221	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCTGGTCCAGAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	55127183	55121214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ENSMUSG00000025981.14_55092028_55110861_1	chr1	+	634	5	FSM	ENSMUSG00000025981.14	ENSMUST00000027125.7	1733	5	99	1000	99	-251	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGGTAGCAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	55092027	55110861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_55092150_55100433_55100584_55103339_55103533_55106655_55106758_55110794
ENSMUSG00000025981.14_55092133_55110921_1	chr1	+	589	5	FSM	ENSMUSG00000025981.14	ENSMUST00000027125.7	1733	5	204	940	204	-191	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCGGGAATTAATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	55092132	55110921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_55092150_55100433_55100584_55103339_55103533_55106655_55106758_55110794
ENSMUSG00000025981.14_55106654_55111257_1	chr1	+	567	2	ISM	ENSMUSG00000025981.14	ENSMUST00000087617.11	834	4	14725	-145	14725	145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTTAATTCTCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	55106653	55111257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_55106758_55110794
ENSMUSG00000025982.14_55026592_55027187_1	chr1	-	150	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	39453	2264	39453	-2264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGCTCCCAGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	55027187	55026591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55026652_55027097
ENSMUSG00000025982.14_55026639_55027245_1	chr1	-	161	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	39395	2311	39395	-2311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCGGAAAGTCAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	55027245	55026638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55026652_55027097
ENSMUSG00000025982.14_55027253_55029544_1	chr1	-	145	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	37096	2925	37096	-2925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCTGTGAGGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	55029544	55027252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55027315_55029461
ENSMUSG00000025982.14_55027299_55029603_1	chr1	-	158	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	37037	2971	37037	-2971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACAGCGAGTGCAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	55029603	55027298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55027315_55029461
ENSMUSG00000025982.14_55029671_55033570_1	chr1	-	146	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	33070	5343	33070	-5343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACGACTGTAGCCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	55033570	55029670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55029735_55033488
ENSMUSG00000025982.14_55033564_55034612_1	chr1	-	145	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	32028	9236	32028	-9236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCTTAAAAGCTCACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55034612	55033563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55033621_55034524
ENSMUSG00000025982.14_55034560_55036050_1	chr1	-	161	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	30590	10232	30590	-10232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTATTGATCTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	55036050	55034559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55034646_55035975
ENSMUSG00000025982.14_55035971_55036189_1	chr1	-	136	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	30451	11643	30451	-11643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGCTGGTCATGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	55036189	55035970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55036088_55036170
ENSMUSG00000025982.14_55036016_55036260_1	chr1	-	162	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	30380	11688	30380	-11688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTCTTGGAGCACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	55036260	55036015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55036088_55036170
ENSMUSG00000025982.14_55036273_55037268_1	chr1	-	153	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	29372	11945	29372	-11945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACAGTTTTATGGCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	55037268	55036272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55036354_55037196
ENSMUSG00000025982.14_55036327_55037320_1	chr1	-	151	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	29320	11999	29320	-11999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTAGTTAATGCTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	55037320	55036326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55036354_55037196
ENSMUSG00000025982.14_55037330_55038856_1	chr1	-	160	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	27784	13002	27784	-13002	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTACAGGAAAATGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	55038856	55037329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55037419_55038785
ENSMUSG00000025982.14_55038786_55039194_1	chr1	-	147	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	27446	14458	27446	-14458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACCTTTTATTGCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	55039194	55038785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55038912_55039173
ENSMUSG00000025982.14_55038879_55039311_1	chr1	-	171	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	27329	14551	27329	-14551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCAAACTACATTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	55039311	55038878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55038912_55039173
ENSMUSG00000025982.14_55039969_55040224_1	chr1	-	159	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	26416	15641	26416	-15641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGGGCATCCCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	55040224	55039968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55040074_55040170
ENSMUSG00000025982.14_55040207_55040650_1	chr1	-	160	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	25990	15879	25990	-15879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAAGGCCGAGAGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	55040650	55040206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55040258_55040541
ENSMUSG00000025982.14_55042310_55042540_1	chr1	-	144	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	24100	17982	24100	-17982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTTGCTTTTAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	55042540	55042309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55042365_55042451
ENSMUSG00000025982.14_55042574_55045036_1	chr1	-	152	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	21604	18246	21604	-18246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATGACTGGTTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	55045036	55042573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55042650_55044960
ENSMUSG00000025982.14_55045490_55046732_1	chr1	-	147	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	19908	21162	19908	-21162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACTCTATTGGTGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	55046732	55045489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55045543_55046638
ENSMUSG00000025982.14_55046825_55051350_1	chr1	-	142	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	15290	22497	15290	-22497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGTGAAACACCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	55051350	55046824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55046877_55051260
ENSMUSG00000025982.14_55056027_55058537_1	chr1	-	161	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	8103	31699	8103	-31699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATCCACGAGCTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	55058537	55056026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55056043_55058392
ENSMUSG00000025983.12_54299189_54395864_1	chr1	+	2183	20	ISM	ENSMUSG00000025983.12	ENSMUST00000027128.11	3807	28	9347	12022	108	-11903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGAAACTGGCCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	54299188	54395864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_54299247_54302602_54302824_54302932_54303112_54311636_54311706_54316812_54316930_54317869_54318000_54320888_54320933_54324693_54324787_54327993_54328102_54329860_54329986_54339464_54339643_54340158_54340228_54344022_54344137_54353303_54353376_54368115_54368224_54368641_54368705_54392154_54392284_54393777_54393948_54394845_54394940_54395822
ENSMUSG00000025983.12_54302737_54400247_1	chr1	+	2216	20	ISM	ENSMUSG00000025983.12	ENSMUST00000027128.11	3807	28	12895	7639	3656	-7520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGCATCACAGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	54302736	54400247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_54302824_54302932_54303112_54311636_54311706_54316812_54316930_54317869_54318000_54320888_54320933_54324693_54324787_54327993_54328102_54329860_54329986_54339464_54339643_54340158_54340228_54344022_54344137_54353303_54353376_54368115_54368224_54368641_54368705_54392154_54392284_54393777_54393948_54394845_54394940_54395822_54395993_54400150
ENSMUSG00000025983.12_54302981_54403651_1	chr1	+	2186	20	ISM	ENSMUSG00000025983.12	ENSMUST00000027128.11	3807	28	13139	4235	3900	-4116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTACGGAGCTGGAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	54302980	54403651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_54303112_54311636_54311706_54316812_54316930_54317869_54318000_54320888_54320933_54324693_54324787_54327993_54328102_54329860_54329986_54339464_54339643_54340158_54340228_54344022_54344137_54353303_54353376_54368115_54368224_54368641_54368705_54392154_54392284_54393777_54393948_54394845_54394940_54395822_54395993_54400150_54400278_54403576
ENSMUSG00000025983.12_54303093_54403757_1	chr1	+	2180	20	ISM	ENSMUSG00000025983.12	ENSMUST00000027128.11	3807	28	13251	4129	4012	-4010	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAGGATGAAGGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	54303092	54403757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_54303112_54311636_54311706_54316812_54316930_54317869_54318000_54320888_54320933_54324693_54324787_54327993_54328102_54329860_54329986_54339464_54339643_54340158_54340228_54344022_54344137_54353303_54353376_54368115_54368224_54368641_54368705_54392154_54392284_54393777_54393948_54394845_54394940_54395822_54395993_54400150_54400278_54403576
ENSMUSG00000025983.12_54311635_54404122_1	chr1	+	2246	20	ISM	ENSMUSG00000025983.12	ENSMUST00000027128.11	3807	28	21793	3764	12554	-3645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAATATGATTCCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	54311634	54404122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_54311706_54316812_54316930_54317869_54318000_54320888_54320933_54324693_54324787_54327993_54328102_54329860_54329986_54339464_54339643_54340158_54340228_54344022_54344137_54353303_54353376_54368115_54368224_54368641_54368705_54392154_54392284_54393777_54393948_54394845_54394940_54395822_54395993_54400150_54400278_54403576_54403772_54404053
ENSMUSG00000025983.12_54316856_54404273_1	chr1	+	2199	20	ISM	ENSMUSG00000025983.12	ENSMUST00000027128.11	3807	28	27014	3613	17775	-3494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCAGTATGAGACCTCG	NA	NA	NA	NA	NA	NA	NA	NA	54316855	54404273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_54316930_54317869_54318000_54320888_54320933_54324693_54324787_54327993_54328102_54329860_54329986_54339464_54339643_54340158_54340228_54344022_54344137_54353303_54353376_54368115_54368224_54368641_54368705_54392154_54392284_54393777_54393948_54394845_54394940_54395822_54395993_54400150_54400278_54403576_54403772_54404053_54404123_54404206
ENSMUSG00000025983.12_54316911_54404329_1	chr1	+	2200	20	ISM	ENSMUSG00000025983.12	ENSMUST00000027128.11	3807	28	27069	3557	17830	-3438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAAAAATGAGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	54316910	54404329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_54316930_54317869_54318000_54320888_54320933_54324693_54324787_54327993_54328102_54329860_54329986_54339464_54339643_54340158_54340228_54344022_54344137_54353303_54353376_54368115_54368224_54368641_54368705_54392154_54392284_54393777_54393948_54394845_54394940_54395822_54395993_54400150_54400278_54403576_54403772_54404053_54404123_54404206
ENSMUSG00000025983.12_54324692_54407192_1	chr1	+	2255	19	ISM	ENSMUSG00000025983.12	ENSMUST00000027128.11	3807	28	34850	694	25611	-575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGCTTATATGGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	54324691	54407192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_54324787_54327993_54328102_54329860_54329986_54339464_54339643_54340158_54340228_54344022_54344137_54353303_54353376_54368115_54368224_54368641_54368705_54392154_54392284_54393777_54393948_54394845_54394940_54395822_54395993_54400150_54400278_54403576_54403772_54404053_54404123_54404206_54404369_54405291_54405379_54407072
ENSMUSG00000025983.12_54328025_54407629_1	chr1	+	2299	19	ISM	ENSMUSG00000025983.12	ENSMUST00000027128.11	3807	28	38183	257	28944	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGACCATGATGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	54328024	54407629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_54328102_54329860_54329986_54339464_54339643_54340158_54340228_54344022_54344137_54353303_54353376_54368115_54368224_54368641_54368705_54392154_54392284_54393777_54393948_54394845_54394940_54395822_54395993_54400150_54400278_54403576_54403772_54404053_54404123_54404206_54404369_54405291_54405379_54407072_54407193_54407459
ENSMUSG00000025983.12_54339465_54407768_1	chr1	+	2236	17	ISM	ENSMUSG00000025983.12	ENSMUST00000027128.11	3807	28	49623	118	-29686	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGTGTCACATGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	54339464	54407768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_54339643_54340158_54340228_54344022_54344137_54353303_54353376_54368115_54368224_54368641_54368705_54392154_54392284_54393777_54393948_54394845_54394940_54395822_54395993_54400150_54400278_54403576_54403772_54404053_54404123_54404206_54404369_54405291_54405379_54407072_54407193_54407459
ENSMUSG00000025991.9_67201744_67210125_1	chr1	+	687	5	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	3247	59370	3247	-59370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGACGCCATGGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	67201743	67210125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67201836_67204540_67204731_67205527_67205686_67207399_67207529_67210007
ENSMUSG00000025991.9_67204592_67211932_1	chr1	+	689	5	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	6095	57563	6095	-57563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTCTTCACCCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	67204591	67211932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67204731_67205527_67205686_67207399_67207529_67210007_67210153_67211814
ENSMUSG00000025991.9_67205569_67213538_1	chr1	+	679	5	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	7072	55957	7072	-55957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTCAGCCTGCTTCGAA	NA	NA	NA	NA	NA	NA	NA	NA	67205568	67213538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67205686_67207399_67207529_67210007_67210153_67211814_67212026_67213461
ENSMUSG00000025991.9_67205622_67213593_1	chr1	+	681	5	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	7125	55902	7125	-55902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATCTTGACCGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	67205621	67213593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67205686_67207399_67207529_67210007_67210153_67211814_67212026_67213461
ENSMUSG00000025991.9_67205667_67213653_1	chr1	+	696	5	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	7170	55842	7170	-55842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGAGGTGAGTCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	67205666	67213653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67205686_67207399_67207529_67210007_67210153_67211814_67212026_67213461
ENSMUSG00000025991.9_67207471_67216124_1	chr1	+	670	5	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	8974	53371	8974	-53371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCATCTGTGGATGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	67207470	67216124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67207529_67210007_67210153_67211814_67212026_67213461_67213661_67216067
ENSMUSG00000025991.9_67210106_67219270_1	chr1	+	675	5	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	11609	50225	11609	-50225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTCCATCGACAAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	67210105	67219270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67210153_67211814_67212026_67213461_67213661_67216067_67216245_67219229
ENSMUSG00000025991.9_67211883_67234360_1	chr1	+	697	5	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	13386	35135	13386	-35135	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTCAAAATGTTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	67211882	67234360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67212026_67213461_67213661_67216067_67216245_67219229_67219349_67234301
ENSMUSG00000025991.9_67211949_67234409_1	chr1	+	680	5	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	13452	35086	13452	-35086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAAAGAAAAACATCCACC	NA	NA	NA	NA	NA	NA	NA	NA	67211948	67234409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67212026_67213461_67213661_67216067_67216245_67219229_67219349_67234301
ENSMUSG00000025991.9_67213596_67237504_1	chr1	+	678	7	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	15099	31991	15099	-31991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCGCCAACTTGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	67213595	67237504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67213661_67216067_67216245_67219229_67219349_67234301_67234444_67235696_67235763_67236163_67236228_67237459
ENSMUSG00000025991.9_67216186_67243710_1	chr1	+	676	7	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	17689	25785	17689	-25785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTGGCGGTCCCGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	67216185	67243710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67216245_67219229_67219349_67234301_67234444_67235696_67235763_67236163_67236228_67237459_67237642_67243666
ENSMUSG00000025991.9_67219269_67243811_1	chr1	+	679	6	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	20772	25684	20772	-25684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGAGCTAAAGGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	67219268	67243811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67219349_67234301_67234444_67235696_67235763_67236163_67236228_67237459_67237642_67243666
ENSMUSG00000025991.9_67234374_67245950_1	chr1	+	681	7	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	35877	23545	35877	-23545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAAAGGTTTCTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	67234373	67245950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67234444_67235696_67235763_67236163_67236228_67237459_67237642_67243666_67243862_67244290_67244359_67245914
ENSMUSG00000025991.9_67235715_67248807_1	chr1	+	686	7	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	37218	20688	37218	-20688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCTGTTGGCAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	67235714	67248807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67235763_67236163_67236228_67237459_67237642_67243666_67243862_67244290_67244359_67245914_67245991_67248754
ENSMUSG00000025991.9_67237526_67253226_1	chr1	+	692	7	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	39029	16269	39029	-16269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGTCCAGTTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	67237525	67253226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67237642_67243666_67243862_67244290_67244359_67245914_67245991_67248754_67248833_67251561_67251670_67253175
ENSMUSG00000025991.9_67243722_67254688_1	chr1	+	680	7	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	45225	14807	45225	-14807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCACGCTGGAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	67243721	67254688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67243862_67244290_67244359_67245914_67245991_67248754_67248833_67251561_67251670_67253175_67253266_67254568
ENSMUSG00000025991.9_67244316_67259713_1	chr1	+	693	8	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	45819	9782	45819	-9782	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGGGTTTAAGATACCT	NA	NA	NA	NA	NA	NA	NA	NA	67244315	67259713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67244359_67245914_67245991_67248754_67248833_67251561_67251670_67253175_67253266_67254568_67254740_67257010_67257086_67259661
ENSMUSG00000025991.9_67248752_67266342_1	chr1	+	684	7	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	50255	3153	50255	-3153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACTCTCTTAGCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	67248751	67266342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67248833_67251561_67251670_67253175_67253266_67254568_67254740_67257010_67257086_67259661_67259761_67266282
ENSMUSG00000025991.9_67253189_67268636_1	chr1	+	684	7	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	54692	859	54692	-859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGTGGACAGTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	67253188	67268636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67253266_67254568_67254740_67257010_67257086_67259661_67259761_67266282_67266343_67267394_67267508_67268547
ENSMUSG00000025991.9_67254568_67269495_1	chr1	+	738	7	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	56071	0	56071	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCGCCTAAAGCAGTATGC	NA	NA	NA	NA	NA	NA	NA	NA	67254567	67269495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_67254740_67257010_67257086_67259661_67259761_67266282_67266343_67267394_67267508_67268547_67268678_67269406
ENSMUSG00000025993.11_45948162_45950494_1	chr1	-	1161	2	ISM	ENSMUSG00000025993.11	ENSMUST00000027137.11	3370	8	14248	934	14248	-934	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATATTTTTCTCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	45950494	45948161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_45948880_45950051
ENSMUSG00000025995.17_45834667_45845897_1	chr1	+	646	7	ISM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	341	16882	341	-16882	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGAAGGAAGATTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	45834666	45845897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832
ENSMUSG00000025995.17_45838191_45846891_1	chr1	+	649	7	ISM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	3865	15888	3865	-15888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGGATTTGGCGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	45838190	45846891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830
ENSMUSG00000025995.17_45840317_45851269_1	chr1	+	635	7	ISM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	5991	11510	5991	-11510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTTCTTCCTCGATTA	NA	NA	NA	NA	NA	NA	NA	NA	45840316	45851269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200
ENSMUSG00000025995.17_45841264_45852248_1	chr1	+	634	7	ISM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	6938	10531	6938	-10531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCCTAGTTAAAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	45841263	45852248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204
ENSMUSG00000025995.17_45845833_45853745_1	chr1	+	589	6	ISM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	11507	9034	11507	-9034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACTGAACTAACAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	45845832	45853745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700
ENSMUSG00000025995.17_45845872_45853817_1	chr1	+	622	6	ISM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	11546	8962	11546	-8962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAATGAGCTGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	45845871	45853817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700
ENSMUSG00000025995.17_45846869_45855717_1	chr1	+	643	6	ISM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	12543	7062	12543	-7062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCATCCTGGTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	45846868	45855717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636
ENSMUSG00000025995.17_45851309_45856490_1	chr1	+	629	6	ISM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	16983	6289	16983	-6289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGAAGATGGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	45851308	45856490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422
ENSMUSG00000025995.17_45853701_45858077_1	chr1	+	706	5	ISM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	19375	4702	19375	-4702	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACTGAACGCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	45853700	45858077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981
ENSMUSG00000025995.17_45853838_45858707_1	chr1	+	628	6	ISM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	19512	4072	19512	-4072	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGTCCAGTGGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	45853837	45858707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648
ENSMUSG00000025995.17_45855736_45859315_1	chr1	+	626	6	ISM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	21410	3464	21410	-3464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCCAGAAGAGAAACTCACA	NA	NA	NA	NA	NA	NA	NA	NA	45855735	45859315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290
ENSMUSG00000025995.17_45856535_45862071_1	chr1	+	666	7	ISM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	22209	708	22209	-708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGCTTCTTTCTTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	45856534	45862071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042
ENSMUSG00000025995.17_45857390_45862508_1	chr1	+	641	7	ISM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	23064	271	23064	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGTGATGATTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	45857389	45862508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ENSMUSG00000026000.17_67039676_67048533_1	chr1	-	3621	5	ISM	ENSMUSG00000026000.17	ENSMUST00000027149.12	4270	10	29491	0	29460	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCGGGTACTGTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	67048533	67039675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386
ENSMUSG00000026000.17_67039789_67049107_1	chr1	-	3546	6	ISM	ENSMUSG00000026000.17	ENSMUST00000027149.12	4270	10	28917	113	28886	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAATCACCCCAAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	67049107	67039788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069
ENSMUSG00000026000.17_67039849_67049157_1	chr1	-	3536	6	ISM	ENSMUSG00000026000.17	ENSMUST00000027149.12	4270	10	28867	173	28836	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGCTGGGCCATAGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	67049157	67039848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069
ENSMUSG00000026000.17_67039957_67060084_1	chr1	-	3544	7	ISM	ENSMUSG00000026000.17	ENSMUST00000027149.12	4270	10	17940	281	17909	-281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTTAGGCTCCAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	67060084	67039956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016
ENSMUSG00000026000.17_67040010_67060224_1	chr1	-	3631	7	ISM	ENSMUSG00000026000.17	ENSMUST00000027149.12	4270	10	17800	334	17769	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGGCCTAATCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	67060224	67040009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016
ENSMUSG00000026000.17_67040131_67073312_1	chr1	-	3540	8	ISM	ENSMUSG00000026000.17	ENSMUST00000027149.12	4270	10	4712	455	4681	-455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATGTAGATAGACTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	67073312	67040130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282
ENSMUSG00000026000.17_67040190_67073362_1	chr1	-	3531	8	ISM	ENSMUSG00000026000.17	ENSMUST00000027149.12	4270	10	4662	514	4631	-514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGGTCATCTGGTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	67073362	67040189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282
ENSMUSG00000026000.17_67040370_67077802_1	chr1	-	3538	9	FSM	ENSMUSG00000026000.17	ENSMUST00000113979.10	4461	9	229	694	191	-694	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTCATCTCCATCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	67077802	67040369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653
ENSMUSG00000026000.17_67040441_67077878_1	chr1	-	3543	9	FSM	ENSMUSG00000026000.17	ENSMUST00000113979.10	4461	9	153	765	115	-765	multi-exon	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTCCTTCAGAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	67077878	67040440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653
ENSMUSG00000026000.17_67040476_67077993_1	chr1	-	3623	9	FSM	ENSMUSG00000026000.17	ENSMUST00000113979.10	4461	9	38	800	0	-800	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCGTGCAGACATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	67077993	67040475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653
ENSMUSG00000026003.6_66869998_66902436_1	chr1	-	1911	11	NNC	ENSMUSG00000026003.6	novel	1916	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2928	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCCCTGGGGAATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	66902436	66869997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880890_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
ENSMUSG00000026003.6_66869998_66902436_4	chr1	-	1909	11	NNC	ENSMUSG00000026003.6	novel	1916	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2986	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCCCTGGGGAATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	66902436	66869997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882335_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
ENSMUSG00000026005.16_66740066_66757007_1	chr1	+	659	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	76	1957	0	-151	multi-exon	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCAGAAACGTTCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	66740065	66757007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ENSMUSG00000026005.16_66740066_66757030_1	chr1	+	740	6	FSM	ENSMUSG00000026005.16	ENST00000429907.5	868	6	0	128	0	-128	multi-exon	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAAGCCACAAGGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	66740065	66757030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756854
ENSMUSG00000026005.16_66740066_66758658_1	chr1	+	2331	7	FSM	ENSMUSG00000026005.16	ENSMUST00000113995.2	2713	7	76	306	0	-306	multi-exon	FALSE	canonical	NA	NA	NA	NA	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAACTATAAGCAAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	66740065	66758658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_66740177_66740775_66740808_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ENSMUSG00000026005.16_66754332_66756982_1	chr1	+	232	3	ISM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	14342	1982	14266	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAAGAAACGTTTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	66754331	66756982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66754407_66755117_66755205_66756912
ENSMUSG00000026014.16_60486733_60534624_1	chr1	-	258	3	ISM	ENSMUSG00000026014.16	ENST00000457812.5	2500	13	37942	656	37941	-656	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTGCATCAGAACATGA	NA	NA	NA	NA	NA	NA	NA	NA	60534624	60486732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60486797_60532696_60532840_60534573
ENSMUSG00000026014.16_60532697_60564917_1	chr1	-	1286	11	ISM	ENSMUSG00000026014.16	ENST00000439222.5	1854	13	7648	0	7648	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1562	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACACACAAACATTACTT	NA	NA	NA	NA	NA	NA	NA	NA	60564917	60532696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60549575_60549651_60564750
ENSMUSG00000026014.16_60532771_60537649_1	chr1	-	356	4	ISM	ENSMUSG00000026014.16	ENST00000423104.5	1860	13	34916	74	34916	-74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCCAAAGTACCGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	60537649	60532770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60532840_60534573_60534695_60535383_60535483_60537582
ENSMUSG00000026014.16_60534643_60565260_1	chr1	-	1417	10	ISM	ENSMUSG00000026014.16	ENST00000439222.5	1854	13	7305	1946	7305	-1946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1759	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCTTATGATTGGACTTCG	NA	NA	NA	NA	NA	NA	NA	NA	60565260	60534642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60549575_60549651_60564750
ENSMUSG00000026014.16_60535384_60566596_1	chr1	-	1418	10	ISM	ENSMUSG00000026014.16	ENST00000439222.5	1854	13	5969	2687	5969	-2687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1638	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATTGCCTTTCCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	60566596	60535383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60549575_60549651_60564750_60565260_60566542
ENSMUSG00000026014.16_60537583_60572521_1	chr1	-	1447	10	ISM	ENSMUSG00000026014.16	ENST00000439222.5	1854	13	44	4886	44	-4886	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATTCTAATTGATATTA	NA	NA	NA	NA	NA	NA	NA	NA	60572521	60537582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60549575_60549651_60564750_60565260_60566542_60566649_60572445
ENSMUSG00000026014.16_60542006_60564812_1	chr1	-	359	4	ISM	ENSMUSG00000026014.16	ENST00000423104.5	1860	13	7753	9309	7753	-9309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATTTCCGAGTTACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	60564812	60542005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60542144_60542676_60542755_60558138_60558220_60564750
ENSMUSG00000026014.16_60542034_60564885_1	chr1	-	404	4	ISM	ENSMUSG00000026014.16	ENST00000423104.5	1860	13	7680	9337	7680	-9337	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGTTTAGACTGGTCGC	NA	NA	NA	NA	NA	NA	NA	NA	60564885	60542033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60542144_60542676_60542755_60558138_60558220_60564750
ENSMUSG00000026014.16_60542044_60564824_1	chr1	-	252	3	ISM	ENSMUSG00000026014.16	ENSMUST00000140485.8	10024	14	41114	20593	7741	-9347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTGTGGCTACAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	60564824	60542043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60542144_60542676_60542755_60564750
ENSMUSG00000026014.16_60542104_60564919_1	chr1	-	368	4	ISM	ENSMUSG00000026014.16	ENST00000423104.5	1860	13	7646	9407	7646	-9407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGATGGTGGATGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	60564919	60542103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60542144_60542676_60542755_60558138_60558220_60564750
ENSMUSG00000026014.16_60558162_60565059_1	chr1	-	367	2	ISM	ENSMUSG00000026014.16	ENST00000423104.5	1860	13	7506	25465	7506	-25465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCAGGCTGAGCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	60565059	60558161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60558220_60564750
ENSMUSG00000026014.16_60565019_60572476_1	chr1	-	378	3	ISM	ENSMUSG00000026014.16	ENST00000423104.5	1860	13	89	32322	89	-32322	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGCTCAGTTAGAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	60572476	60565018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60565260_60566542_60566649_60572445
ENSMUSG00000026019.16_60116655_60121785_1	chr1	-	1176	5	ISM	ENSMUSG00000026019.16	ENSMUST00000122038.8	2850	14	15520	628	15282	-628	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACACACTTATAACCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	60121785	60116654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667
ENSMUSG00000026019.16_60117315_60126341_1	chr1	-	808	8	ISM	ENSMUSG00000026019.16	ENSMUST00000122038.8	2850	14	10964	1288	10726	-1288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGAAGAGACTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	60126341	60117314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204
ENSMUSG00000026019.16_60119678_60127298_1	chr1	-	839	8	ISM	ENSMUSG00000026019.16	ENSMUST00000122038.8	2850	14	10007	3651	9769	-3651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAATTTACAAATTACT	NA	NA	NA	NA	NA	NA	NA	NA	60127298	60119677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199
ENSMUSG00000026019.16_60121244_60128492_1	chr1	-	817	8	ISM	ENSMUSG00000026019.16	ENSMUST00000122038.8	2850	14	8813	5217	8575	-5217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCGGGCTCTTTAGATA	NA	NA	NA	NA	NA	NA	NA	NA	60128492	60121243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410
ENSMUSG00000026019.16_60121450_60130273_1	chr1	-	852	8	ISM	ENSMUSG00000026019.16	ENSMUST00000122038.8	2850	14	7032	5423	6794	-5423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGTATCCAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	60130273	60121449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178
ENSMUSG00000026019.16_60122954_60136856_1	chr1	-	851	8	ISM	ENSMUSG00000026019.16	ENSMUST00000122038.8	2850	14	449	6927	211	-6927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAGCAAAAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	60136856	60122953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
ENSMUSG00000026019.16_60126269_60137375_1	chr1	-	799	7	ISM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	429	10242	-70	-10242	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGCTGCCGAGGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	60137375	60126268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
ENSMUSG00000026020.10_59724213_59750548_1	chr1	+	1515	13	FSM	ENSMUSG00000026020.10	ENSMUST00000027174.10	1713	13	77	121	45	80	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGCTCTCAAATAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	59724212	59750548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59750429
ENSMUSG00000026020.10_59724213_59751560_1	chr1	+	2819	15	FSM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	45	6643	45	891	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGCACACTAAACGAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	59724212	59751560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ENSMUSG00000026020.10_59724213_59751616_1	chr1	+	2875	15	FSM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	45	6587	45	947	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAGTACTATATTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	59724212	59751616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ENSMUSG00000026020.10_59735186_59751908_1	chr1	+	2815	12	ISM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	11018	6295	-10975	1239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGGTCTACCTGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	59735185	59751908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ENSMUSG00000026020.10_59735186_59751972_1	chr1	+	2879	12	ISM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	11018	6231	-10975	1303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAGAGAGGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	59735185	59751972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ENSMUSG00000026020.10_59737575_59752121_1	chr1	+	2862	11	ISM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	13407	6082	-8586	1452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTTTTCGAGACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	59737574	59752121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ENSMUSG00000026020.10_59743318_59752358_1	chr1	+	2759	8	ISM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	19150	5845	-2843	1689	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTTAGCATTGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	59743317	59752358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ENSMUSG00000026020.10_59743868_59752560_1	chr1	+	2826	7	ISM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	19700	5643	-2293	1891	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTCTTCATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	59743867	59752560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ENSMUSG00000026020.10_59744815_59752689_1	chr1	+	2850	6	ISM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	20647	5514	-1346	2020	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTTTATTGATCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	59744814	59752689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ENSMUSG00000026020.10_59744880_59752732_1	chr1	+	2828	6	ISM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	20712	5471	-1281	2063	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAGTATCACTGGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	59744879	59752732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ENSMUSG00000026020.10_59746168_59750468_1	chr1	+	364	4	FSM	ENSMUSG00000026020.10	ENST00000564443.1	371	4	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGAAGACTAATGTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	59746167	59750468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_59746224_59748161_59748296_59749676_59749812_59750429
ENSMUSG00000026020.10_59748210_59753032_1	chr1	+	2847	3	ISM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	24042	5171	2049	2363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTAGTTTATTTTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	59748209	59753032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59748296_59749653_59749812_59750429
ENSMUSG00000026020.10_59749713_59753179_1	chr1	+	2849	2	ISM	ENSMUSG00000026020.10	ENST00000564443.1	371	4	3552	-2711	3552	2510	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCTTAGGGTGGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	59749712	59753179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59749812_59750429
ENSMUSG00000026020.10_59749768_59753239_1	chr1	+	2854	2	ISM	ENSMUSG00000026020.10	ENST00000564443.1	371	4	3607	-2771	3607	2570	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCAGGCTTTGGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	59749767	59753239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59749812_59750429
ENSMUSG00000026021.16_59678593_59709898_1	chr1	-	1115	5	NNC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGCTCCTTTTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	59709898	59678592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_59679428_59681576_59681649_59683675_59683749_59694616_59694692_59709838
ENSMUSG00000026021.16_59678745_59709898_1	chr1	-	968	5	FSM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	95	152	0	-152	multi-exon	FALSE	canonical	NA	NA	NA	NA	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCAGTTATTAATAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	59709898	59678744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59709838
ENSMUSG00000026021.16_59678788_59709951_1	chr1	-	978	5	FSM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	42	195	42	-195	multi-exon	FALSE	canonical	NA	NA	NA	NA	2591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACAGTATTGTCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	59709951	59678787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59709838
ENSMUSG00000026021.16_59678792_59709956_1	chr1	-	979	5	FSM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	37	199	37	-199	multi-exon	FALSE	canonical	NA	NA	NA	NA	2253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAAGACAGTATTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	59709956	59678791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59709838
ENSMUSG00000026023.17_59296975_59319822_1	chr1	+	411	4	ISM	ENSMUSG00000026023.17	ENSMUST00000114248.3	1477	14	909	71706	909	-71706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTCTCCAGACTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	59296974	59319822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59297116_59297861_59297957_59304762_59304843_59319727
ENSMUSG00000026023.17_59297102_59326954_1	chr1	+	381	6	ISM	ENSMUSG00000026023.17	ENSMUST00000114248.3	1477	14	1036	64574	1036	-64574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCACCACCAGCGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	59297101	59326954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59297116_59297861_59297957_59304762_59304843_59319727_59319823_59320567_59320631_59326920
ENSMUSG00000026023.17_59319726_59328938_1	chr1	+	405	4	ISM	ENSMUSG00000026023.17	ENSMUST00000114248.3	1477	14	23660	62590	23660	-62590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGATCTAGTGCCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	59319725	59328938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59319823_59320567_59320631_59326920_59327045_59328817
ENSMUSG00000026023.17_59319798_59340373_1	chr1	+	353	5	ISM	ENSMUSG00000026023.17	ENSMUST00000114248.3	1477	14	23732	51155	23732	-51155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAATGTTCCAGGGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	59319797	59340373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59319823_59320567_59320631_59326920_59327045_59328817_59328939_59340353
ENSMUSG00000026023.17_59327012_59370040_1	chr1	+	384	6	ISM	ENSMUSG00000026023.17	ENSMUST00000114248.3	1477	14	30946	21488	30946	-21488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCTGGCCTCCCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	59327011	59370040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59327045_59328817_59328939_59340353_59340448_59349954_59350019_59365829_59365879_59370017
ENSMUSG00000026023.17_59340353_59383472_1	chr1	+	414	5	ISM	ENSMUSG00000026023.17	ENSMUST00000114248.3	1477	14	44287	8056	44287	-8056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	813	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGGAAGAGACACCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	59340352	59383472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59340448_59349954_59350019_59365829_59365879_59370017_59370158_59383406
ENSMUSG00000026024.15_59202085_59219742_1	chr1	-	1821	12	ISM	ENSMUSG00000026024.15	ENST00000680814.1	5516	33	56680	-43	13565	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTCTATGACTGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	59219742	59202084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59202657_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707
ENSMUSG00000026024.15_59202209_59219805_1	chr1	-	1760	12	ISM	ENSMUSG00000026024.15	ENST00000680814.1	5516	33	56617	81	13502	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGGATCATGATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	59219805	59202208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59202657_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707
ENSMUSG00000026024.15_59202324_59222399_1	chr1	-	1736	13	ISM	ENSMUSG00000026024.15	ENST00000680814.1	5516	33	54023	196	10908	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACTCGTAGCTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	59222399	59202323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59202657_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322
ENSMUSG00000026024.15_59203008_59206705_1	chr1	-	548	3	ISM	ENSMUSG00000026024.15	ENST00000681495.1	3764	21	26602	904	26602	209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAAAGCTGCTTAGATG	NA	NA	NA	NA	NA	NA	NA	NA	59206705	59203007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59203375_59206341_59206439_59206621
ENSMUSG00000026024.15_59203087_59207362_1	chr1	-	588	4	ISM	ENSMUSG00000026024.15	ENST00000681495.1	3764	21	25945	983	25945	130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCTACTTAGAAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	59207362	59203086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309
ENSMUSG00000026024.15_59203217_59209088_1	chr1	-	606	6	ISM	ENSMUSG00000026024.15	ENST00000681495.1	3764	21	24219	1113	24219	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGTTGTAATTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	59209088	59203216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995
ENSMUSG00000026024.15_59203330_59209138_1	chr1	-	543	6	ISM	ENSMUSG00000026024.15	ENST00000681495.1	3764	21	24169	1226	24169	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGCTTGAGGACCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	59209138	59203329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995
ENSMUSG00000026024.15_59206386_59209646_1	chr1	-	539	6	ISM	ENSMUSG00000026024.15	ENST00000681495.1	3764	21	23661	4282	23661	-3169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCCAGCATGGGGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	59209646	59206385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595
ENSMUSG00000026024.15_59206614_59224623_1	chr1	-	1732	15	ISM	ENSMUSG00000026024.15	ENST00000680497.1	6542	33	35209	4510	8684	-3397	internal_fragment	TRUE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGACATCGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	59224623	59206613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555
ENSMUSG00000026024.15_59206675_59224686_1	chr1	-	1734	15	ISM	ENSMUSG00000026024.15	ENST00000680497.1	6542	33	35146	4571	8621	-3458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCCATGGATGACTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	59224686	59206674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555
ENSMUSG00000026024.15_59206730_59224740_1	chr1	-	1733	15	ISM	ENSMUSG00000026024.15	ENST00000680497.1	6542	33	35092	4626	8567	-3513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTTGAAGAGATCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	59224740	59206729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555
ENSMUSG00000026024.15_59209075_59226590_1	chr1	-	1771	15	ISM	ENSMUSG00000026024.15	ENST00000680497.1	6542	33	33242	6971	6717	-5858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTACTGGGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	59226590	59209074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479
ENSMUSG00000026024.15_59209079_59218285_1	chr1	-	560	5	ISM	ENSMUSG00000026024.15	ENST00000680759.1	6187	33	58137	6975	15022	-5862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGACATTTACTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	59218285	59209078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59218218
ENSMUSG00000026024.15_59209129_59218338_1	chr1	-	563	5	ISM	ENSMUSG00000026024.15	ENST00000680759.1	6187	33	58084	7025	14969	-5912	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGCTCTACCCACCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	59218338	59209128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59218218
ENSMUSG00000026024.15_59212341_59231091_1	chr1	-	1718	15	ISM	ENSMUSG00000026024.15	ENST00000680497.1	6542	33	28741	10237	2216	6905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGAGGATTTTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	59231091	59212340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047
ENSMUSG00000026024.15_59212395_59231147_1	chr1	-	1720	15	ISM	ENSMUSG00000026024.15	ENST00000680497.1	6542	33	28685	10291	2160	6851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGGCCAACCGCCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	59231147	59212394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047
ENSMUSG00000026024.15_59212418_59222386_1	chr1	-	561	6	ISM	ENSMUSG00000026024.15	ENST00000680759.1	6187	33	54036	10314	10921	6828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAGAATGACATATGTG	NA	NA	NA	NA	NA	NA	NA	NA	59222386	59212417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59212473_59214082_59214201_59218218_59218353_59219264_59219343_59219707_59219820_59222322
ENSMUSG00000026024.15_59212435_59231210_1	chr1	-	1743	15	ISM	ENSMUSG00000026024.15	ENST00000680497.1	6542	33	28622	10331	2097	6811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGACCCTGGTTGCGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	59231210	59212434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047
ENSMUSG00000026024.15_59217737_59235463_1	chr1	-	1721	15	ISM	ENSMUSG00000026024.15	ENST00000680497.1	6542	33	24369	15633	-2156	1509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGCTGTGGCCTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	59235463	59217736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349
ENSMUSG00000026024.15_59218262_59238272_1	chr1	-	1717	15	ISM	ENSMUSG00000026024.15	ENST00000680497.1	6542	33	21560	16158	-4965	984	internal_fragment	FALSE	canonical	NA	NA	NA	NA	621	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGCCTGTATGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	59238272	59218261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178
ENSMUSG00000026024.15_59219707_59242256_1	chr1	-	1810	14	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	33899	461	-8949	-461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGGCTCTTTATATGT	NA	NA	NA	NA	NA	NA	NA	NA	59242256	59219706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073
ENSMUSG00000026024.15_59222322_59245755_1	chr1	-	1776	14	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	30400	3076	-12448	-3076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGTCTGAAATGAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	59245755	59222321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677
ENSMUSG00000026024.15_59222423_59246964_1	chr1	-	1721	15	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	29191	3177	12868	-3177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGGAGTGGAAAACTGACT	NA	NA	NA	NA	NA	NA	NA	NA	59246964	59222422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918
ENSMUSG00000026024.15_59222968_59248191_1	chr1	-	1763	15	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	27964	3722	11641	-3722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAATGTGTGGGCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	59248191	59222967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107
ENSMUSG00000026024.15_59224611_59250358_1	chr1	-	1725	14	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	25797	5365	9474	-5365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAAAGGATGCCACTTAC	NA	NA	NA	NA	NA	NA	NA	NA	59250358	59224610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289
ENSMUSG00000026024.15_59226564_59254333_1	chr1	-	1717	12	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	21822	7318	5499	-7318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGAGCCCTCTCCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	59254333	59226563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260
ENSMUSG00000026024.15_59231048_59254576_1	chr1	-	1783	10	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	21579	11802	5256	-11802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGTTTCGTGTGTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	59254576	59231047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260
ENSMUSG00000026024.15_59233224_59254723_1	chr1	-	1735	9	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	21432	13978	5109	-13978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGATTCCAGCTTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	59254723	59233223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260
ENSMUSG00000026024.15_59238222_59254973_1	chr1	-	1727	7	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	21182	18976	4859	-18976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCGAAATCAAATCACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	59254973	59238221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260
ENSMUSG00000026024.15_59242074_59255180_1	chr1	-	1805	6	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	20975	22828	4652	-22828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAACTGCAGTAGAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	59255180	59242073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260
ENSMUSG00000026024.15_59242209_59257140_1	chr1	-	1725	7	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	19015	22963	2692	-22963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTTTTTAGTGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	59257140	59242208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085
ENSMUSG00000026024.15_59246917_59259611_1	chr1	-	1779	6	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	16544	27671	221	-27671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGCTCACTGGAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	59259611	59246916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533
ENSMUSG00000026024.15_59248107_59276390_1	chr1	-	1758	6	ISM	ENSMUSG00000026024.15	ENST00000680814.1	5516	33	32	45979	0	-28861	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGCCACCAGCATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	59276390	59248106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ENSMUSG00000026024.15_59250418_59275634_1	chr1	-	1486	5	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	521	31172	521	-31172	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCGAGAAGAGCAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	59275634	59250417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59275531
ENSMUSG00000026024.15_59250484_59275720_1	chr1	-	1506	5	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	435	31238	435	-31238	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCCCCTGCGAGACGG	NA	NA	NA	NA	NA	NA	NA	NA	59275720	59250483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59275531
ENSMUSG00000026024.15_59250555_59275765_1	chr1	-	1480	5	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	390	31309	390	-31309	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGTCAGAGTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	59275765	59250554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59275531
ENSMUSG00000026024.15_59254315_59275908_1	chr1	-	1476	4	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	247	35069	247	-35069	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATTCGATGAGGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	59275908	59254314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59255181_59257085_59257241_59259533_59259612_59275531
ENSMUSG00000026024.15_59254369_59275987_1	chr1	-	1501	4	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	168	35123	168	-35123	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCGTCATACCCAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	59275987	59254368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59255181_59257085_59257241_59259533_59259612_59275531
ENSMUSG00000026024.15_59254452_59276052_1	chr1	-	1483	4	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	103	35206	103	-35206	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAGTCAGACCACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	59276052	59254451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59255181_59257085_59257241_59259533_59259612_59275531
ENSMUSG00000026024.15_59254930_59276390_1	chr1	-	561	4	ISM	ENSMUSG00000026024.15	ENST00000680814.1	5516	33	32	52802	0	-35684	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCAGCCCGTCATTAGC	NA	NA	NA	NA	NA	NA	NA	NA	59276390	59254929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59255181_59257085_59257241_59259533_59259612_59276313
ENSMUSG00000026027.14_59012681_59032227_1	chr1	+	1425	10	ISM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	0	2647	0	1556	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGACGTTCTCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	59012680	59032227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031362_59031535_59031809_59031915_59032051
ENSMUSG00000026027.14_59012795_59032282_1	chr1	+	1366	10	ISM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	114	2592	114	1611	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCCTGAGAAAAGGTAATA	NA	NA	NA	NA	NA	NA	NA	NA	59012794	59032282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031362_59031535_59031809_59031915_59032051
ENSMUSG00000026027.14_59024488_59033841_1	chr1	+	1370	9	ISM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	11807	1033	11807	-1033	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCCCCCGCTTCTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	59024487	59033841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031362_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
ENSMUSG00000026027.14_59027711_59033943_1	chr1	+	1366	8	ISM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	15030	931	15030	-931	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGAATGAACCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	59027710	59033943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59027787_59028848_59028958_59030171_59030296_59031362_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
ENSMUSG00000026027.14_59028884_59034156_1	chr1	+	1468	7	ISM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	16203	718	16203	-718	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGAGAAGATGCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	59028883	59034156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59028958_59030171_59030296_59031362_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
ENSMUSG00000026027.14_59028909_59034156_1	chr1	+	1443	7	ISM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	16228	718	16228	-718	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGAGAAGATGCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	59028908	59034156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59028958_59030171_59030296_59031362_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
ENSMUSG00000026027.14_59031418_59034305_1	chr1	+	1364	5	ISM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	18737	569	18737	-569	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTTAACAAAACTAGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	59031417	59034305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
ENSMUSG00000026027.14_59032096_59034564_1	chr1	+	1357	3	ISM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	19415	310	19415	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGGGCTAGTTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	59032095	59034564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59032297_59032719_59032763_59033451
ENSMUSG00000026027.14_59032144_59034637_1	chr1	+	1382	3	ISM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	19463	237	19463	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACATCACAGGAAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	59032143	59034637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59032297_59032719_59032763_59033451
ENSMUSG00000026027.14_59032207_59034678_1	chr1	+	1360	3	ISM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	19526	196	19526	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCTACAAGCTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	59032206	59034678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59032297_59032719_59032763_59033451
ENSMUSG00000026028.13_58939608_58985552_1	chr1	-	5853	15	ISM	ENSMUSG00000026028.13	ENSMUST00000027186.12	6189	16	27037	0	-56	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTGTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	58985552	58939607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_58943342_58945864_58945971_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405
ENSMUSG00000026028.13_58939793_59012469_1	chr1	-	5884	16	FSM	ENSMUSG00000026028.13	ENSMUST00000027186.12	6189	16	120	185	120	-185	multi-exon	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGTCCACTGCCAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	59012469	58939792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_58943342_58945864_58945971_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
ENSMUSG00000026029.15_58834636_58868092_1	chr1	+	762	4	ISM	ENSMUSG00000026029.15	ENSMUST00000027189.15	2585	9	103	18570	0	-15911	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCTAAAATCAATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	58834635	58868092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58834898_58863073_58863407_58866365_58866472_58868031
ENSMUSG00000026029.15_58834837_58872847_1	chr1	+	811	7	ISM	ENSMUSG00000026029.15	ENSMUST00000027189.15	2585	9	304	13815	201	-11156	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAATCATGATTTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	58834836	58872847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58834898_58863073_58863407_58866365_58866472_58868031_58868171_58868254_58868309_58870764_58870827_58872791
ENSMUSG00000026029.15_58866379_58883770_1	chr1	+	693	4	FSM	ENSMUSG00000026029.15	ENST00000264275.9	940	4	14	233	14	-233	multi-exon	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGCTTGCCAAGGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	58866378	58883770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_58866472_58868031_58868171_58872740_58872934_58883502
ENSMUSG00000026029.15_58866437_58883883_1	chr1	+	813	6	ISM	ENSMUSG00000026029.15	ENSMUST00000190213.2	1628	10	24625	2030	72	-120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGCAGACTTTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	58866436	58883883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58866472_58868031_58868171_58868254_58868309_58870764_58870827_58872791_58872934_58883502
ENSMUSG00000026029.15_58866453_58883809_1	chr1	+	658	4	FSM	ENSMUSG00000026029.15	ENST00000264275.9	940	4	88	194	88	-194	multi-exon	FALSE	canonical	NA	NA	NA	NA	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGGCAGGCTTCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	58866452	58883809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_58866472_58868031_58868171_58872740_58872934_58883502
ENSMUSG00000026029.15_58868106_58883865_1	chr1	+	428	2	ISM	ENSMUSG00000026029.15	ENST00000264274.13	783	3	72	2059	72	-138	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAACTATATTCCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	58868105	58883865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58868171_58883502
ENSMUSG00000026029.15_58872794_58884004_1	chr1	+	642	2	ISM	ENSMUSG00000026029.15	ENST00000264275.9	940	4	6429	-1	4760	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTTGGCCTCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	58872793	58884004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58872934_58883502
ENSMUSG00000026029.15_58872880_58885913_1	chr1	+	689	3	ISM	ENSMUSG00000026029.15	ENST00000323492.11	976	4	4846	11	4846	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTGCTCTCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	58872879	58885913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58872934_58883502_58884005_58885780
ENSMUSG00000026029.15_58883501_58886167_1	chr1	+	891	2	ISM	ENSMUSG00000026029.15	ENST00000264274.13	783	3	15467	-243	15467	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATGTATGTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	58883500	58886167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58884005_58885780
ENSMUSG00000026031.16_58752661_58771490_1	chr1	+	906	5	FSM	ENSMUSG00000026031.16	ENSMUST00000114309.8	2010	5	208	896	185	-896	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAGCCAGTGTATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	58752660	58771490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_58752819_58765464_58765892_58768214_58768321_58770310_58770447_58771411
ENSMUSG00000026031.16_58770329_58791996_1	chr1	+	818	5	NNC	ENSMUSG00000026031.16	novel	842	5	NA	NA	20	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCAGGTGAGTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	58770328	58791996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_58770442_58771411_58771486_58779421_58779472_58780123_58780206_58791497
ENSMUSG00000026031.16_58770329_58791996_2	chr1	+	823	5	FSM	ENSMUSG00000026031.16	ENST00000340870.6	842	5	20	-1	20	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCAGGTGAGTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	58770328	58791996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_58770447_58771411_58771486_58779421_58779472_58780123_58780206_58791497
ENSMUSG00000026031.16_58770329_58793135_1	chr1	+	967	4	FSM	ENSMUSG00000026031.16	ENST00000341582.10	929	4	20	-58	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTTGGCGGTTACGGCT	NA	NA	NA	NA	NA	NA	NA	NA	58770328	58793135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_58770451_58780061_58780206_58791497_58792006_58792942
ENSMUSG00000026031.16_58770348_58772229_1	chr1	+	917	2	ISM	ENSMUSG00000026031.16	ENSMUST00000114309.8	2010	5	17895	157	39	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAATGAGCCTCCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	58770347	58772229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58770447_58771411
ENSMUSG00000026032.9_58625809_58634856_1	chr1	+	299	3	FSM	ENSMUSG00000026032.9	ENST00000454214.1	419	3	9	111	9	-111	multi-exon	FALSE	canonical	NA	NA	NA	NA	2366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGAGTGTAATATTAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	58625808	58634856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_58625899_58630248_58630409_58634807
ENSMUSG00000026032.9_58625809_58634967_1	chr1	+	341	3	FSM	ENSMUSG00000026032.9	ENSMUST00000027193.9	763	3	266	156	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCCTTGTGACGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	58625808	58634967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_58625830_58630248_58630409_58634807
ENSMUSG00000026032.9_58630364_58634967_1	chr1	+	205	2	ISM	ENSMUSG00000026032.9	ENST00000454214.1	419	3	4564	0	4564	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCCTTGTGACGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	58630363	58634967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58630409_58634807
ENSMUSG00000026032.9_58630364_58635123_1	chr1	+	361	2	ISM	ENSMUSG00000026032.9	ENST00000454214.1	419	3	4564	-156	4564	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCCCTCTAACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	58630363	58635123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58630409_58634807
ENSMUSG00000026034.18_58451159_58460417_1	chr1	-	1438	11	ISM	ENSMUSG00000026034.18	ENSMUST00000034868.14	1796	13	2808	0	2808	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	58460417	58451158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58459279_58459371_58460241
ENSMUSG00000026034.18_58451360_58461093_1	chr1	-	1448	12	ISM	ENSMUSG00000026034.18	ENSMUST00000034868.14	1796	13	2132	201	2132	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATTTATAAACACAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	58461093	58451359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58459279_58459371_58460241_58460468_58460932
ENSMUSG00000026034.18_58451475_58461093_1	chr1	-	1333	12	ISM	ENSMUSG00000026034.18	ENSMUST00000034868.14	1796	13	2132	316	2132	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGAGCTTCTCTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	58461093	58451474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58459279_58459371_58460241_58460468_58460932
ENSMUSG00000026034.18_58451859_58463225_1	chr1	-	1402	12	ISM	ENSMUSG00000026034.18	ENSMUST00000034868.14	1796	13	0	700	0	-700	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACACAGTTCTGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	58463225	58451858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58459279_58459371_58460241_58460468_58460932_58461094_58463078
ENSMUSG00000026035.16_58470294_58484095_1	chr1	-	729	7	FSM	ENSMUSG00000026035.16	ENSMUST00000117069.8	1363	7	493	141	433	-138	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTCTCCTGGTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	58484095	58470293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58483969
ENSMUSG00000026036.18_58484426_58501289_1	chr1	+	2327	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	116	1326	0	-136	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTTAAGGGCACTGACT	NA	NA	NA	NA	NA	NA	NA	NA	58484425	58501289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ENSMUSG00000026036.18_58484426_58501425_1	chr1	+	2463	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	116	1190	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGACACACTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	58484425	58501425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ENSMUSG00000026036.18_58484565_58501441_1	chr1	+	2340	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	255	1174	139	16	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTCTCTATGAAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	58484564	58501441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ENSMUSG00000026036.18_58486939_58501799_1	chr1	+	2323	6	FSM	ENSMUSG00000026036.18	ENSMUST00000171597.2	2098	6	149	-374	149	374	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCTAGGCATGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	58486938	58501799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ENSMUSG00000026036.18_58489545_58502088_1	chr1	+	2303	5	ISM	ENSMUSG00000026036.18	ENSMUST00000171597.2	2098	6	2755	-663	2755	-527	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGATGTCTCAGTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	58489544	58502088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ENSMUSG00000026036.18_58489587_58502151_1	chr1	+	2324	5	ISM	ENSMUSG00000026036.18	ENSMUST00000171597.2	2098	6	2797	-726	2797	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGCCTGTCACAC	NA	NA	NA	NA	NA	NA	NA	NA	58489586	58502151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ENSMUSG00000026036.18_58489605_58502236_1	chr1	+	2391	5	ISM	ENSMUSG00000026036.18	ENSMUST00000171597.2	2098	6	2815	-811	2815	-379	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAGGCCTTGTCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	58489604	58502236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ENSMUSG00000026036.18_58491341_58502384_1	chr1	+	2342	4	ISM	ENSMUSG00000026036.18	ENSMUST00000171597.2	2098	6	4551	-959	4551	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGTTTTTGAAACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	58491340	58502384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58491375_58494755_58494895_58496938_58497023_58500299
ENSMUSG00000026036.18_58494862_58502615_1	chr1	+	2433	3	ISM	ENSMUSG00000026036.18	ENSMUST00000171597.2	2098	6	8072	-1190	8072	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAATGTCAATGTACAA	NA	NA	NA	NA	NA	NA	NA	NA	58494861	58502615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58494895_58496938_58497023_58500299
ENSMUSG00000026037.15_58501930_58506834_1	chr1	-	1664	3	ISM	ENSMUSG00000026037.15	ENSMUST00000114325.8	1587	15	33741	-1433	33741	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTAGTTTTGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	58506834	58501929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_58503450_58505153_58505273_58506809
ENSMUSG00000026037.15_58502095_58508910_1	chr1	-	1620	4	ISM	ENSMUSG00000026037.15	ENSMUST00000114325.8	1587	15	31665	-1268	31665	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCCAACTCCATGTACT	NA	NA	NA	NA	NA	NA	NA	NA	58508910	58502094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826
ENSMUSG00000026037.15_58502249_58510160_1	chr1	-	1616	5	ISM	ENSMUSG00000026037.15	ENSMUST00000114325.8	1587	15	30415	-1114	30415	-319	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCTCTCTTCACTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	58510160	58502248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098
ENSMUSG00000026037.15_58502396_58511532_1	chr1	-	1623	6	ISM	ENSMUSG00000026037.15	ENSMUST00000114325.8	1587	15	29043	-967	29043	-466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAACATTCAGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	58511532	58502395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463
ENSMUSG00000026037.15_58502650_58515663_1	chr1	-	1601	8	ISM	ENSMUSG00000026037.15	ENSMUST00000114325.8	1587	15	24912	-713	24912	713	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCATCATTCTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	58515663	58502649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592
ENSMUSG00000026037.15_58502771_58519488_1	chr1	-	1598	9	ISM	ENSMUSG00000026037.15	ENSMUST00000114325.8	1587	15	21087	-592	21087	592	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCATGTGTCCAATCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	58519488	58502770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409
ENSMUSG00000026037.15_58502876_58520215_1	chr1	-	1610	10	ISM	ENSMUSG00000026037.15	ENSMUST00000114325.8	1587	15	20360	-487	20360	487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGCCTTCTCCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	58520215	58502875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118
ENSMUSG00000026037.15_58503363_58539543_1	chr1	-	1637	15	ISM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	4725	1433	1032	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTCTTATCCTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	58539543	58503362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399
ENSMUSG00000026037.15_58508843_58544084_1	chr1	-	1660	15	ISM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	184	6913	184	-5480	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCCCCAATGCAAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	58544084	58508842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ENSMUSG00000026037.15_58508887_58544090_1	chr1	-	1622	15	ISM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	178	6957	178	-5524	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTCTGCCACTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	58544090	58508886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ENSMUSG00000026037.15_58508939_58544143_1	chr1	-	1623	15	ISM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	125	7009	125	-5576	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTATACTGAAGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	58544143	58508938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ENSMUSG00000026037.15_58510099_58544268_1	chr1	-	1688	14	ISM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	0	8169	0	-6736	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTCTTGTTACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	58544268	58510098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ENSMUSG00000026039.10_58035241_58054809_1	chr1	+	1225	7	ISM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	111	10249	111	-10249	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAAAGCGCATGGAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	58035240	58054809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517
ENSMUSG00000026039.10_58037301_58055079_1	chr1	+	1218	6	ISM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	2171	9979	2171	-9979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGCCAGAGCAGAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	58037300	58055079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517
ENSMUSG00000026039.10_58039197_58055318_1	chr1	+	1303	5	ISM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	4067	9740	4067	-9740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTTGATCTGTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	58039196	58055318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517
ENSMUSG00000026039.10_58052697_58055534_1	chr1	+	1222	2	ISM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	17567	9524	17567	-9524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGGACTTGAAAAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	58052696	58055534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58052902_58054517
ENSMUSG00000026039.10_58052822_58055665_1	chr1	+	1228	2	ISM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	17692	9393	17692	-9393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCACGTCCTAGAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	58052821	58055665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58052902_58054517
ENSMUSG00000026039.10_58052869_58055735_1	chr1	+	1251	2	ISM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	17739	9323	17739	-9323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAGTTCAAAAGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	58052868	58055735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58052902_58054517
ENSMUSG00000026039.10_58056310_58064177_1	chr1	+	1222	3	ISM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	21180	881	21180	-881	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATTGGTCATCACAT	NA	NA	NA	NA	NA	NA	NA	NA	58056309	58064177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58057143_58058747_58058902_58063942
ENSMUSG00000026039.10_58056501_58064367_1	chr1	+	1221	3	ISM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	21371	691	21371	-691	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGGAGGTTGGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	58056500	58064367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58057143_58058747_58058902_58063942
ENSMUSG00000026039.10_58056742_58064607_1	chr1	+	1220	3	ISM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	21612	451	21612	-451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAAAAAAAACGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	58056741	58064607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58057143_58058747_58058902_58063942
ENSMUSG00000026039.10_58058810_58065058_1	chr1	+	1212	2	NNC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	23680	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTATCTATTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	58058809	58065058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_58058906_58063942
ENSMUSG00000026042.17_45413481_45482029_4	chr1	-	6166	52	NNC	ENSMUSG00000026042.17	novel	6625	54	NA	NA	60413	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAGTATGAAATTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	45482029	45413480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_45415391_45415798_45416039_45417466_45417655_45419159_45419452_45421275_45421384_45422326_45422381_45422750_45422859_45423559_45423614_45424121_45424230_45425992_45426047_45427372_45427481_45428531_45428640_45429191_45429354_45430235_45430290_45430821_45430876_45430983_45431092_45431463_45431518_45431974_45432029_45432212_45432267_45433541_45433596_45433880_45433989_45435220_45435320_45435609_45435655_45439980_45440035_45441238_45441293_45442275_45442330_45442419_45442474_45442580_45442680_45443360_45443415_45443892_45443992_45444399_45444454_45445399_45445508_45445703_45445758_45446181_45446281_45446392_45446438_45446861_45446961_45450593_45450648_45452629_45452675_45453907_45453962_45456086_45456132_45456747_45456802_45457658_45457713_45460380_45460435_45461103_45461158_45461545_45461600_45462841_45462887_45466147_45466226_45469057_45469169_45474051_45474106_45475538_45475572_45476623_45476657_45481790
ENSMUSG00000026042.17_45413600_45542047_1	chr1	-	6113	53	NNC	ENSMUSG00000026042.17	novel	6625	54	NA	NA	395	-119	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	897	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGACATCAATGAAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	45542047	45413599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_45415391_45415798_45416039_45417466_45417655_45419159_45419452_45421275_45421384_45422326_45422381_45422750_45422859_45423559_45423614_45424121_45424230_45425992_45426047_45427372_45427481_45428531_45428640_45429191_45429354_45430235_45430290_45430821_45430876_45430983_45431092_45431463_45431518_45431974_45432029_45432212_45432267_45433541_45433596_45433880_45433989_45435220_45435320_45435609_45435655_45439980_45440035_45441238_45441293_45442275_45442330_45442419_45442474_45442580_45442680_45443360_45443415_45443892_45443992_45444399_45444454_45445399_45445508_45445703_45445758_45446181_45446281_45446392_45446438_45446861_45446961_45450593_45450648_45452629_45452675_45453907_45453962_45456086_45456132_45456747_45456802_45457658_45457713_45460380_45460435_45461103_45461158_45461545_45461600_45462841_45462887_45466147_45466226_45469057_45469169_45474051_45474106_45475538_45475572_45476623_45476657_45481790_45482029_45541980
ENSMUSG00000026042.17_45413661_45542087_1	chr1	-	6092	53	NNC	ENSMUSG00000026042.17	novel	6625	54	NA	NA	355	-180	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATTTTGTCTGCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	45542087	45413660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_45415391_45415798_45416039_45417466_45417655_45419159_45419452_45421275_45421384_45422326_45422381_45422750_45422859_45423559_45423614_45424121_45424230_45425992_45426047_45427372_45427481_45428531_45428640_45429191_45429354_45430235_45430290_45430821_45430876_45430983_45431092_45431463_45431518_45431974_45432029_45432212_45432267_45433541_45433596_45433880_45433989_45435220_45435320_45435609_45435655_45439980_45440035_45441238_45441293_45442275_45442330_45442419_45442474_45442580_45442680_45443360_45443415_45443892_45443992_45444399_45444454_45445399_45445508_45445703_45445758_45446181_45446281_45446392_45446438_45446861_45446961_45450593_45450648_45452629_45452675_45453907_45453962_45456086_45456132_45456747_45456802_45457658_45457713_45460380_45460435_45461103_45461158_45461545_45461600_45462841_45462887_45466147_45466226_45469057_45469169_45474051_45474106_45475538_45475572_45476623_45476657_45481790_45482029_45541980
ENSMUSG00000026042.17_45413714_45542147_1	chr1	-	6099	53	NNC	ENSMUSG00000026042.17	novel	6625	54	NA	NA	295	-233	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTCCTGGTAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	45542147	45413713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_45415391_45415798_45416039_45417466_45417655_45419159_45419452_45421275_45421384_45422326_45422381_45422750_45422859_45423559_45423614_45424121_45424230_45425992_45426047_45427372_45427481_45428531_45428640_45429191_45429354_45430235_45430290_45430821_45430876_45430983_45431092_45431463_45431518_45431974_45432029_45432212_45432267_45433541_45433596_45433880_45433989_45435220_45435320_45435609_45435655_45439980_45440035_45441238_45441293_45442275_45442330_45442419_45442474_45442580_45442680_45443360_45443415_45443892_45443992_45444399_45444454_45445399_45445508_45445703_45445758_45446181_45446281_45446392_45446438_45446861_45446961_45450593_45450648_45452629_45452675_45453907_45453962_45456086_45456132_45456747_45456802_45457658_45457713_45460380_45460435_45461103_45461158_45461545_45461600_45462841_45462887_45466147_45466226_45469057_45469169_45474051_45474106_45475538_45475572_45476623_45476657_45481790_45482029_45541980
ENSMUSG00000026042.17_45413747_45542242_1	chr1	-	6145	53	NIC	ENSMUSG00000026042.17	novel	6625	54	NA	NA	200	-266	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGGTCCTTTTAGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	45542242	45413746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_-_45415391_45415798_45416039_45417466_45417655_45419159_45419452_45421275_45421384_45422326_45422381_45422750_45422859_45423559_45423614_45424121_45424230_45425992_45426047_45427372_45427481_45428531_45428640_45429191_45429354_45430235_45430290_45430821_45430876_45430983_45431092_45431463_45431518_45431974_45432029_45432212_45432267_45433541_45433596_45433880_45433989_45435220_45435320_45435609_45435655_45439980_45440035_45441238_45441293_45442275_45442330_45442419_45442474_45442580_45442680_45443360_45443415_45443892_45443992_45444399_45444454_45445399_45445508_45445703_45445758_45446181_45446281_45446392_45446438_45446861_45446961_45450593_45450648_45452629_45452675_45453907_45453962_45456086_45456132_45456747_45456802_45457658_45457713_45460380_45460435_45461103_45461158_45461545_45461600_45462841_45462887_45466147_45466226_45469057_45469169_45474051_45474106_45475538_45475572_45476623_45476657_45481806_45482029_45541980
ENSMUSG00000026043.19_45350833_45360726_1	chr1	+	230	2	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	135	28140	135	-28140	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGTCTGTGACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	45350832	45360726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45350993_45360656
ENSMUSG00000026043.19_45350935_45360844_1	chr1	+	246	2	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	237	28022	237	-28022	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTACACCTGTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	45350934	45360844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45350993_45360656
ENSMUSG00000026043.19_45360731_45361639_1	chr1	+	251	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	10033	27227	10033	-27227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCTGGAATCTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	45360730	45361639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45360857_45361101_45361153_45361565
ENSMUSG00000026043.19_45360813_45362933_1	chr1	+	260	4	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	10115	25933	10115	-25933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTGGCTATCCGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	45360812	45362933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45360857_45361101_45361153_45361565_45361680_45362882
ENSMUSG00000026043.19_45364520_45367023_1	chr1	+	270	5	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	13822	21843	13822	-21843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGACCCTAATCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	45364519	45367023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45364574_45364964_45365019_45365730_45365785_45366748_45366803_45366969
ENSMUSG00000026043.19_45365731_45368081_1	chr1	+	261	5	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	15033	20785	15033	-20785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTATGTTTCCTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	45365730	45368081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45365785_45366748_45366803_45366969_45367024_45367592_45367647_45368036
ENSMUSG00000026043.19_45366749_45368266_1	chr1	+	261	5	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	16051	20600	16051	-20600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTGCCACAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	45366748	45368266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45366803_45366969_45367024_45367592_45367647_45368036_45368082_45368212
ENSMUSG00000026043.19_45366970_45369307_1	chr1	+	252	5	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	16272	19559	16272	-19559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAACTTTGCATCTAA	NA	NA	NA	NA	NA	NA	NA	NA	45366969	45369307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45367024_45367592_45367647_45368036_45368082_45368212_45368267_45369262
ENSMUSG00000026043.19_45367593_45369768_1	chr1	+	252	5	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	16895	19098	16895	-19098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCCTACAGTTCTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	45367592	45369768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45367647_45368036_45368082_45368212_45368267_45369262_45369308_45369714
ENSMUSG00000026043.19_45369263_45370721_1	chr1	+	243	4	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	18565	18145	18565	-18145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAAGCTGCCCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	45369262	45370721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45369308_45369714_45369769_45370265_45370365_45370676
ENSMUSG00000026043.19_45373166_45373974_1	chr1	+	262	4	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	22468	14892	22468	-14892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTTTCATATAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	45373165	45373974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45373221_45373373_45373473_45373756_45373811_45373920
ENSMUSG00000026043.19_45373757_45375864_1	chr1	+	261	5	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	23059	13002	23059	-13002	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTCTTTACCTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	45373756	45375864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45373811_45373920_45373975_45374294_45374349_45374887_45374942_45375819
ENSMUSG00000026043.19_45374926_45376693_1	chr1	+	268	4	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	24228	12173	24228	-12173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTATAGCTGCATATGT	NA	NA	NA	NA	NA	NA	NA	NA	45374925	45376693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45374942_45375819_45375865_45376400_45376500_45376585
ENSMUSG00000026043.19_45379118_45380153_1	chr1	+	260	4	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	28420	8713	28420	-8713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGGGGCCACCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	45379117	45380153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45379142_45379414_45379469_45379789_45379844_45380025
ENSMUSG00000026043.19_45380104_45381347_1	chr1	+	257	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	29406	7519	29406	-7519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTGGTCAGCCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	45380103	45381347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45380188_45380297_45380406_45381282
ENSMUSG00000026043.19_45380357_45382584_1	chr1	+	242	4	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	29659	6282	29659	-6282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGGCGCTCCTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	45380356	45382584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45380406_45381282_45381391_45382415_45382470_45382553
ENSMUSG00000026043.19_45384200_45385228_1	chr1	+	241	2	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	33502	3638	33502	-3638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGATGGTTCTCGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	45384199	45385228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45384220_45385007
ENSMUSG00000026043.19_45385163_45386374_1	chr1	+	235	2	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	34465	2492	34465	-2492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGACTGTCCCACGTAA	NA	NA	NA	NA	NA	NA	NA	NA	45385162	45386374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45385303_45386279
ENSMUSG00000026043.19_45385220_45386426_1	chr1	+	230	2	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	34522	2440	34522	-2440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTTGGTTTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	45385219	45386426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45385303_45386279
ENSMUSG00000026043.19_45386820_45387800_1	chr1	+	259	2	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	36122	1066	36122	-1066	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACGCAAGGCAATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	45386819	45387800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45387039_45387760
ENSMUSG00000026043.19_45386882_45387840_1	chr1	+	237	2	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	36184	1026	36184	-1026	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTATGACATTGGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	45386881	45387840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45387039_45387760
ENSMUSG00000026043.19_45386926_45387898_1	chr1	+	251	2	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	36228	968	36228	-968	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTATAAGCCAAACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	45386925	45387898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_45387039_45387760
ENSMUSG00000026047.14_44145706_44153678_1	chr1	-	1456	7	ISM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	4290	0	4018	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTGGCCTCTGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	44153678	44145705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600
ENSMUSG00000026047.14_44146047_44156278_1	chr1	-	1402	9	ISM	ENSMUSG00000026047.14	ENST00000376004.5	1752	10	1418	2	1418	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCTGTTTTGTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	44156278	44146046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197
ENSMUSG00000026047.14_44146047_44156334_1	chr1	-	1458	9	ISM	ENSMUSG00000026047.14	ENST00000376004.5	1752	10	1362	2	1362	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCTGTTTTGTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	44156334	44146046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197
ENSMUSG00000026047.14_44146215_44157533_1	chr1	-	1415	10	FSM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	435	509	163	-168	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAGGACACTTTACTAT	NA	NA	NA	NA	NA	NA	NA	NA	44157533	44146214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ENSMUSG00000026047.14_44149221_44157861_1	chr1	-	1518	8	ISM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	107	3515	64	-3174	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGAATTTGCGAGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	44157861	44149220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ENSMUSG00000026047.14_44150004_44157886_1	chr1	-	1411	7	ISM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	82	4298	39	-3957	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACTTTTACAATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	44157886	44150003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ENSMUSG00000026049.12_44125776_44141617_1	chr1	-	935	5	FSM	ENSMUSG00000026049.12	ENST00000376029.3	938	5	0	3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGTGCCTTTGTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	44141617	44125775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_44126224_44127635_44127688_44130520_44130752_44139007_44139082_44141487
ENSMUSG00000026049.12_44125970_44141369_1	chr1	-	1207	6	FSM	ENSMUSG00000026049.12	ENSMUST00000147571.8	1360	6	153	0	134	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTCAGACTAATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	44141369	44125969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059
ENSMUSG00000026049.12_44126020_44130907_1	chr1	-	849	4	ISM	ENSMUSG00000026049.12	ENST00000376019.5	1573	5	8275	247	8275	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGTTGGTTAATTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	44130907	44126019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520
ENSMUSG00000026049.12_44126189_44138841_1	chr1	-	816	5	FSM	ENSMUSG00000026049.12	ENST00000376019.5	1573	5	341	416	341	-162	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAGTAAAATTCATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	44138841	44126188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130908_44138705
ENSMUSG00000026049.12_44126189_44141617_1	chr1	-	808	6	FSM	ENSMUSG00000026049.12	ENSMUST00000150911.8	960	6	-16	168	0	-162	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAGTAAAATTCATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	44141617	44126188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141487
ENSMUSG00000026049.12_44127177_44139162_1	chr1	-	928	4	ISM	ENSMUSG00000026049.12	ENST00000376019.5	1573	5	20	1404	20	-1150	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTGTCATACTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	44139162	44127176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_44127209_44127635_44127688_44130520_44130908_44138705
ENSMUSG00000026072.13_40332344_40355361_1	chr1	+	4408	9	ISM	ENSMUSG00000026072.13	ENSMUST00000114795.3	4832	11	26598	0	26598	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTGCTCTGTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	40332343	40355361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40332518_40332617_40332808_40333917_40334087_40337068_40337135_40339919_40340038_40341437_40341590_40349445_40349590_40351506_40351675_40352134
ENSMUSG00000026074.16_39940682_40062554_1	chr1	+	2695	22	ISM	ENSMUSG00000026074.16	ENST00000456652.5	3835	24	14	2095	14	-1318	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCCCAACACGGATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	39940681	40062554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045833_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519
ENSMUSG00000026074.16_39940706_40045945_1	chr1	+	1388	12	ISM	ENSMUSG00000026074.16	ENST00000627726.2	3072	24	38	17927	38	-17927	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGAGCGGCTCCGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	39940705	40045945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830
ENSMUSG00000026074.16_40001336_40062679_1	chr1	+	2769	21	ISM	ENSMUSG00000026074.16	ENST00000456652.5	3835	24	60668	1970	60668	-1193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1037	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGACACGTCGTGACGAG	NA	NA	NA	NA	NA	NA	NA	NA	40001335	40062679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045833_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519
ENSMUSG00000026074.16_40013130_40039855_1	chr1	+	1424	12	ISM	ENSMUSG00000026074.16	ENST00000625522.2	5681	30	72462	25794	72462	-24017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATGCTCCAGAGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	40013129	40039855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690
ENSMUSG00000026074.16_40013162_40063585_1	chr1	+	2751	21	ISM	ENSMUSG00000026074.16	ENST00000456652.5	3835	24	72494	1064	72494	-287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTGTGAACGCAATGA	NA	NA	NA	NA	NA	NA	NA	NA	40013161	40063585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40013213_40015866_40015978_40019719_40019811_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045833_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469
ENSMUSG00000026074.16_40015941_40063914_1	chr1	+	2776	21	ISM	ENSMUSG00000026074.16	ENST00000456652.5	3835	24	75273	735	75273	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGAGCGAGACCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	40015940	40063914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40015978_40019719_40019811_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045833_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ENSMUSG00000026074.16_40019782_40049817_1	chr1	+	1426	11	ISM	ENSMUSG00000026074.16	ENST00000627726.2	3072	24	79114	14055	79114	-14055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCTCATCGTCCGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	40019781	40049817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40019811_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716
ENSMUSG00000026074.16_40022356_40043037_1	chr1	+	1419	11	ISM	ENSMUSG00000026074.16	ENST00000625522.2	5681	30	81688	22612	81688	-20835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTCCCGCAGTGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	40022355	40043037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40040589_40040752_40042916
ENSMUSG00000026074.16_40025871_40045918_1	chr1	+	1430	10	ISM	ENSMUSG00000026074.16	ENST00000625522.2	5681	30	85203	19731	85203	-17954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCCAGCCTGGCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	40025870	40045918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045830
ENSMUSG00000026074.16_40029247_40064085_1	chr1	+	2748	18	ISM	ENSMUSG00000026074.16	ENST00000456652.5	3835	24	88579	564	88579	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	952	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATCAAGGCTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	40029246	40064085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045833_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ENSMUSG00000026074.16_40029307_40048905_1	chr1	+	1438	10	ISM	ENSMUSG00000026074.16	ENST00000625522.2	5681	30	88639	16744	88639	-14967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAACAGACTACTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	40029306	40048905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046700_40048847
ENSMUSG00000026074.16_40029334_40053707_1	chr1	+	1398	11	ISM	ENSMUSG00000026074.16	ENST00000627726.2	3072	24	88666	10165	88666	-10165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGACCAGAAGCCATAAGG	NA	NA	NA	NA	NA	NA	NA	NA	40029333	40053707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686
ENSMUSG00000026074.16_40029388_40048969_1	chr1	+	1421	10	ISM	ENSMUSG00000026074.16	ENST00000625522.2	5681	30	88720	16680	88720	-14903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACAGGAGGGGGCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	40029387	40048969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046700_40048847
ENSMUSG00000026074.16_40029411_40053746_1	chr1	+	1360	11	ISM	ENSMUSG00000026074.16	ENST00000627726.2	3072	24	88743	10126	88743	-10126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGGTCAATGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	40029410	40053746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686
ENSMUSG00000026074.16_40036206_40064288_1	chr1	+	2713	17	ISM	ENSMUSG00000026074.16	ENST00000456652.5	3835	24	95538	361	95538	159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	874	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGACTTTGGCAGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	40036205	40064288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045833_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ENSMUSG00000026074.16_40036270_40056323_1	chr1	+	1387	11	ISM	ENSMUSG00000026074.16	ENST00000627726.2	3072	24	95602	7549	95602	-7549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAGGGAAAGTATACCCT	NA	NA	NA	NA	NA	NA	NA	NA	40036269	40056323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269
ENSMUSG00000026074.16_40039053_40064413_1	chr1	+	2696	16	ISM	ENSMUSG00000026074.16	ENST00000456652.5	3835	24	98385	236	98385	-236	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	740	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGACAGTATGTGGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	40039052	40064413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40039135_40039690_40039910_40043966_40044074_40045833_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ENSMUSG00000026074.16_40039053_40064499_1	chr1	+	2782	16	ISM	ENSMUSG00000026074.16	ENST00000456652.5	3835	24	98385	150	98385	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTGGGTGGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	40039052	40064499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40039135_40039690_40039910_40043966_40044074_40045833_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ENSMUSG00000026074.16_40039837_40064676_1	chr1	+	2734	15	NIC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	99169	27	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTGTTGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	40039836	40064676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_40039910_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ENSMUSG00000026074.16_40040608_40056380_1	chr1	+	1438	10	ISM	ENSMUSG00000026074.16	ENST00000625522.2	5681	30	99940	9269	99940	-7492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAAGGCCTAAATGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	40040607	40056380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046700_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269
ENSMUSG00000026074.16_40040711_40058765_1	chr1	+	1430	11	ISM	ENSMUSG00000026074.16	ENST00000625522.2	5681	30	100043	6884	100043	-5107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCCAGAGGTTGAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	40040710	40058765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046700_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703
ENSMUSG00000026074.16_40043965_40062014_1	chr1	+	1484	11	ISM	ENSMUSG00000026074.16	ENST00000625522.2	5681	30	103297	3635	103297	-1858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAAAGAACCCACACTC	NA	NA	NA	NA	NA	NA	NA	NA	40043964	40062014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40044074_40045830_40045983_40046592_40046700_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864
ENSMUSG00000026074.16_40043965_40064676_1	chr1	+	2660	14	ISM	ENSMUSG00000026074.16	ENST00000456652.5	3835	24	103297	-27	103297	27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTGTTGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	40043964	40064676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40044074_40045833_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ENSMUSG00000026074.16_40045828_40062553_1	chr1	+	1412	11	ISM	ENSMUSG00000026074.16	ENST00000625522.2	5681	30	105160	3096	105160	-1319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCCCAACACGGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	40045827	40062553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40045983_40046592_40046700_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519
ENSMUSG00000026074.16_40046553_40062679_1	chr1	+	1423	10	ISM	ENSMUSG00000026074.16	ENST00000625522.2	5681	30	105885	2970	105885	-1193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGACACGTCGTGACGAG	NA	NA	NA	NA	NA	NA	NA	NA	40046552	40062679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40046700_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519
ENSMUSG00000026074.16_40046660_40063585_1	chr1	+	1432	11	ISM	ENSMUSG00000026074.16	ENST00000625522.2	5681	30	105992	2064	105992	-287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTGTGAACGCAATGA	NA	NA	NA	NA	NA	NA	NA	NA	40046659	40063585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40046700_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469
ENSMUSG00000026074.16_40046684_40063609_1	chr1	+	1432	11	ISM	ENSMUSG00000026074.16	ENST00000625522.2	5681	30	106016	2040	106016	-263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTCCCTTACGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	40046683	40063609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40046700_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469
ENSMUSG00000026074.16_40061970_40064876_1	chr1	+	1433	4	ISM	ENSMUSG00000026074.16	ENST00000456652.5	3835	24	121302	-227	121302	227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTAGTTTATGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	40061969	40064876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40062015_40062519_40062680_40063469_40063610_40063788
ENSMUSG00000026074.16_40062565_40064989_1	chr1	+	1456	3	ISM	ENSMUSG00000026074.16	ENST00000456652.5	3835	24	121897	-340	121897	340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAACAAAAAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	40062564	40064989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40062680_40063469_40063610_40063788
ENSMUSG00000026074.16_40062647_40065038_1	chr1	+	1423	3	ISM	ENSMUSG00000026074.16	ENST00000456652.5	3835	24	121979	-389	121979	389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTAGCTGCTGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	40062646	40065038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_40062680_40063469_40063610_40063788
ENSMUSG00000026078.11_39024689_39030362_1	chr1	+	2278	2	ISM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	0	5957	0	-5957	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAAAAAGGGCATCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	39024688	39030362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_39026931_39030326
ENSMUSG00000026078.11_39024865_39034011_1	chr1	+	2212	3	ISM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	176	2308	176	-2308	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTCTGGAAGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	39024864	39034011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_39026931_39030326_39030457_39033995
ENSMUSG00000026078.11_39024984_39034376_1	chr1	+	2219	4	ISM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	295	1943	295	-1943	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTTTAGAGATCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	39024983	39034376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325
ENSMUSG00000026078.11_39025045_39034419_1	chr1	+	2201	4	ISM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	356	1900	356	-1900	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAAAGCCGGCGAGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	39025044	39034419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325
ENSMUSG00000026078.11_39025153_39034888_1	chr1	+	2216	5	ISM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	464	1431	464	-1431	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCATTTCAACGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	39025152	39034888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815
ENSMUSG00000026078.11_39025212_39034931_1	chr1	+	2200	5	ISM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	523	1388	523	-1388	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCCCACGGTGTTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	39025211	39034931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815
ENSMUSG00000026078.11_39025265_39034979_1	chr1	+	2195	5	ISM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	576	1340	576	-1340	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGGTCCTCTGGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	39025264	39034979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815
ENSMUSG00000026078.11_39025756_39035727_1	chr1	+	2248	6	NNC	ENSMUSG00000026078.11	novel	3914	6	NA	NA	1067	-592	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAGTGCAAAAAATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	39025755	39035727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_39026931_39030326_39030457_39033995_39034087_39034332_39034470_39034815_39035025_39035221
ENSMUSG00000026078.11_39025818_39035761_1	chr1	+	2221	6	NNC	ENSMUSG00000026078.11	novel	3914	6	NA	NA	1129	-558	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	633	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATCGTTCGTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	39025817	39035761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_39026931_39030326_39030457_39033995_39034081_39034325_39034470_39034815_39035025_39035221
ENSMUSG00000026078.11_39026415_39036319_1	chr1	+	2188	6	FSM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	1726	0	1726	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATTGTAAGATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	39026414	39036319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
ENSMUSG00000026083.13_38037210_38091102_1	chr1	+	4120	24	FSM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	119	3558	119	-3558	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTTCTACAGATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	38037209	38091102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38056918_38091290_1	chr1	+	4081	23	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	19827	3370	19827	-3370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTAGTCAGGAGAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	38056917	38091290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38056984_38091331_1	chr1	+	4056	23	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	19893	3329	19893	-3329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGACACTGCAGTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	38056983	38091331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38058247_38091763_1	chr1	+	4073	21	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	21156	2897	21156	-2897	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTTTGGACATCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	38058246	38091763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38060741_38092174_1	chr1	+	4049	20	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	23650	2486	23650	-2486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCAGTGTGCTTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	38060740	38092174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38060781_38092239_1	chr1	+	4074	20	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	23690	2421	23690	-2421	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCATGTTCCATACAGACT	NA	NA	NA	NA	NA	NA	NA	NA	38060780	38092239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38060837_38092293_1	chr1	+	4072	20	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	23746	2367	23746	-2367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGCACCACTGAAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	38060836	38092293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38061336_38092427_1	chr1	+	4059	19	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	24245	2233	24245	-2233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCCAGCCCAGACAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	38061335	38092427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38075116_38092832_1	chr1	+	4098	15	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	38025	1828	38025	-1828	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACGCCTTACAGCTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	38075115	38092832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38075168_38092916_1	chr1	+	4130	15	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	38077	1744	38077	-1744	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTGAGATAGTAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	38075167	38092916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38076324_38093078_1	chr1	+	4065	14	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	39233	1582	39233	-1582	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGAGGAAGTGAACGAGA	NA	NA	NA	NA	NA	NA	NA	NA	38076323	38093078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38076356_38093149_1	chr1	+	4104	14	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	39265	1511	39265	-1511	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTCCAGTTACCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	38076355	38093149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38076722_38093331_1	chr1	+	4156	13	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	39631	1329	39631	-1329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCATTGCTGGTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	38076721	38093331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38083830_38093497_1	chr1	+	4050	10	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	46739	1163	46739	-1163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATAAAGTCCTCCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	38083829	38093497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38084412_38093624_1	chr1	+	4083	9	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	47321	1036	47321	-1036	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGCAGTCTCAAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	38084411	38093624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38084554_38093742_1	chr1	+	4059	9	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	47463	918	47463	-918	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTCTCTAGGATGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	38084553	38093742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38085776_38094069_1	chr1	+	4107	7	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	48685	591	48685	-591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAATTTCTGTGCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	38085775	38094069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38087932_38094199_1	chr1	+	4130	6	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	50841	461	50841	-461	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAAAGAGTGTCTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	38087931	38094199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38088400_38094421_1	chr1	+	4058	4	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	51309	239	51309	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTCTTGAGGCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	38088399	38094421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38090204_38094664_1	chr1	+	4140	2	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	53113	-4	53113	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGACCCTCGGCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	38090203	38094664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_38090366_38090686
ENSMUSG00000026087.12_37929614_37937419_1	chr1	+	716	6	FSM	ENSMUSG00000026087.12	ENSMUST00000027256.12	969	6	56	197	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTGATGGAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	37929613	37937419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_37929666_37932023_37932105_37933019_37933097_37934410_37934492_37936768_37936916_37937141
ENSMUSG00000026087.12_37933016_37937617_1	chr1	+	785	4	FSM	ENSMUSG00000026087.12	ENSMUST00000195373.2	587	4	0	-198	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTAGTCAGTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	37933015	37937617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_37933097_37934410_37934492_37936768_37936916_37937141
ENSMUSG00000026088.16_37918069_37924361_1	chr1	-	843	6	ISM	ENSMUSG00000026088.16	ENSMUST00000027257.10	1231	7	5131	100	5127	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCAAAGCAAATATTGGG	NA	NA	NA	NA	NA	NA	NA	NA	37924361	37918068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_37918445_37918640_37918702_37920013_37920130_37920779_37920867_37921642_37921780_37924295
ENSMUSG00000026088.16_37918175_37929357_1	chr1	-	890	7	FSM	ENSMUSG00000026088.16	ENSMUST00000027257.10	1231	7	135	206	131	-206	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTTGTGAGGCAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	37929357	37918174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_37918445_37918640_37918702_37920013_37920130_37920779_37920867_37921642_37921780_37924295_37924398_37929240
ENSMUSG00000026088.16_37918211_37929381_1	chr1	-	878	7	FSM	ENSMUSG00000026088.16	ENSMUST00000027257.10	1231	7	111	242	107	-242	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATCCCACAGGGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	37929381	37918210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_37918445_37918640_37918702_37920013_37920130_37920779_37920867_37921642_37921780_37924295_37924398_37929240
ENSMUSG00000026088.16_37918282_37929492_1	chr1	-	918	7	FSM	ENSMUSG00000026088.16	ENSMUST00000027257.10	1231	7	0	313	0	-313	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTACACACTGGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	37929492	37918281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_37918445_37918640_37918702_37920013_37920130_37920779_37920867_37921642_37921780_37924295_37924398_37929240
ENSMUSG00000026094.15_53796566_53800197_1	chr1	-	421	2	ISM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	24186	1901	24186	-1901	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTTATATTATAAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	53800197	53796565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53796930_53800140
ENSMUSG00000026094.15_53796625_53800246_1	chr1	-	411	2	ISM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	24137	1960	24137	-1960	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGACTCGGAAATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	53800246	53796624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53796930_53800140
ENSMUSG00000026094.15_53796830_53803265_1	chr1	-	404	4	ISM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	21118	2165	21118	-2165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGGATCTGACTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	53803265	53796829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53796930_53800140_53800321_53801747_53801797_53803190
ENSMUSG00000026094.15_53801778_53810878_1	chr1	-	401	4	ISM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	13505	7113	13505	-7113	internal_fragment	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCCCATTACCACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	53810878	53801777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53801797_53803190_53803318_53805079_53805225_53810768
ENSMUSG00000026094.15_53805087_53815728_1	chr1	-	404	3	ISM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	8655	10422	8655	-10422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGGTATGTTAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	53815728	53805086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53805225_53810768_53810982_53815675
ENSMUSG00000026094.15_53805190_53815838_1	chr1	-	411	3	ISM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	8545	10525	8545	-10525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTTAGCCGAAATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	53815838	53805189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53805225_53810768_53810982_53815675
ENSMUSG00000026095.16_53383928_53385858_1	chr1	-	331	2	ISM	ENSMUSG00000026095.16	ENSMUST00000123519.9	983	6	6053	124	6053	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCTGATAAGTGTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	53385858	53383927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53384139_53385738
ENSMUSG00000026095.16_53383975_53386208_1	chr1	-	381	3	ISM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	5703	199	5703	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATTTGGATCTAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	53386208	53383974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53384139_53385738_53385921_53386173
ENSMUSG00000026095.16_53384084_53386314_1	chr1	-	378	3	ISM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	5597	308	5597	-280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGTAGACCTCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	53386314	53384083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53384139_53385738_53385921_53386173
ENSMUSG00000026095.16_53385817_53386475_1	chr1	-	406	2	ISM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	5436	2041	5436	-2013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAATTGGGTCGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	53386475	53385816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53385921_53386173
ENSMUSG00000026095.16_53385884_53386536_1	chr1	-	400	2	ISM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	5375	2108	5375	-2080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTATTCCCGTCATCGT	NA	NA	NA	NA	NA	NA	NA	NA	53386536	53385883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53385921_53386173
ENSMUSG00000026096.15_53352832_53365192_1	chr1	+	1509	8	FSM	ENSMUSG00000026096.15	ENSMUST00000027265.10	1868	8	49	310	10	-310	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACTCTGGGAAGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	53352831	53365192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ENSMUSG00000026096.15_53352832_53365326_1	chr1	+	1643	8	FSM	ENSMUSG00000026096.15	ENSMUST00000027265.10	1868	8	49	176	10	-176	multi-exon	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCATTTCGTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	53352831	53365326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ENSMUSG00000026096.15_53352966_53365326_1	chr1	+	1509	8	FSM	ENSMUSG00000026096.15	ENSMUST00000027265.10	1868	8	183	176	144	-176	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCATTTCGTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	53352965	53365326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ENSMUSG00000026097.10_53336270_53348276_1	chr1	+	702	4	FSM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	16	1192	16	-1192	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATGCCTCTGTCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	53336269	53348276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_53336348_53338130_53338312_53344613_53344766_53347985
ENSMUSG00000026097.10_53338217_53348391_1	chr1	+	653	3	ISM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	1963	1077	1963	-1077	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGAAATGTGGGATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	53338216	53348391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_53338312_53344613_53344766_53347985
ENSMUSG00000026097.10_53338236_53348475_1	chr1	+	718	3	ISM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	1982	993	1982	-993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCATAGCCGGTTGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	53338235	53348475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_53338312_53344613_53344766_53347985
ENSMUSG00000026097.10_53344719_53348625_1	chr1	+	687	2	ISM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	8465	843	8465	-843	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCATTTATTACATTACA	NA	NA	NA	NA	NA	NA	NA	NA	53344718	53348625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_53344766_53347985
ENSMUSG00000026098.14_53228462_53314306_1	chr1	-	2066	10	NNC	ENSMUSG00000026098.14	novel	2305	11	NA	NA	6925	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTGGTTCTTAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	53314306	53228461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53245720_53246572_53246736_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228
ENSMUSG00000026098.14_53228462_53314306_2	chr1	-	2068	10	ISM	ENSMUSG00000026098.14	ENST00000447232.6	2305	11	6925	0	6925	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTGGTTCTTAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	53314306	53228461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53228658_53231258_53231420_53234086_53234218_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228
ENSMUSG00000026098.14_53228463_53245991_1	chr1	-	1238	5	ISM	ENSMUSG00000026098.14	ENST00000432292.7	2499	10	75240	1	75240	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTGGTTCTTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	53245991	53228462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720
ENSMUSG00000026098.14_53228464_53246093_1	chr1	-	1339	5	ISM	ENSMUSG00000026098.14	ENST00000432292.7	2499	10	75138	2	75138	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATGTGGTTCTTAACC	NA	NA	NA	NA	NA	NA	NA	NA	53246093	53228463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720
ENSMUSG00000026098.14_53228560_53246186_1	chr1	-	1336	5	ISM	ENSMUSG00000026098.14	ENST00000432292.7	2499	10	75045	98	75045	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAAGGCTGTGTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	53246186	53228559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720
ENSMUSG00000026098.14_53228616_53321147_1	chr1	-	2067	11	FSM	ENSMUSG00000026098.14	ENST00000447232.6	2305	11	84	154	84	-154	multi-exon	FALSE	canonical	NA	NA	NA	NA	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGAGAGGATGTCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	53321147	53228615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_53228658_53231258_53231420_53234086_53234218_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099
ENSMUSG00000026098.14_53231295_53246339_1	chr1	-	1355	4	ISM	ENSMUSG00000026098.14	ENST00000432292.7	2499	10	74892	2833	74892	-2833	internal_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTAGACCTCGAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	53246339	53231294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53231420_53234086_53234218_53235981_53236462_53245720
ENSMUSG00000026098.14_53231351_53246391_1	chr1	-	1351	4	ISM	ENSMUSG00000026098.14	ENST00000432292.7	2499	10	74840	2889	74840	-2889	internal_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATTTAAAGGAAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	53246391	53231350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53231420_53234086_53234218_53235981_53236462_53245720
ENSMUSG00000026098.14_53236078_53246868_1	chr1	-	1369	3	ISM	ENSMUSG00000026098.14	ENST00000639501.1	1925	8	74363	-159	74363	159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGAGTGGAGGAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	53246868	53236077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53236462_53245720_53246572_53246734
ENSMUSG00000026098.14_53236271_53255506_1	chr1	-	1426	5	ISM	ENSMUSG00000026098.14	ENST00000432292.7	2499	10	65725	7809	65725	-34	internal_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATGAAAAGAAGAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	53255506	53236270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389
ENSMUSG00000026098.14_53236271_53295904_1	chr1	-	1426	5	ISM	ENSMUSG00000026098.14	ENST00000639501.1	1925	8	25327	34	25327	-34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATGAAAAGAAGAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	53295904	53236270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53295787
ENSMUSG00000026098.14_53236416_53295832_1	chr1	-	1326	6	ISM	ENSMUSG00000026098.14	ENST00000432292.7	2499	10	25399	7954	25399	-179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAGAAAGCTATTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	53295832	53236415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787
ENSMUSG00000026098.14_53245827_53314313_1	chr1	-	1378	6	ISM	ENSMUSG00000026098.14	ENST00000624204.3	2682	11	6918	17365	6918	-9590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCGCACTCAGTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	53314313	53245826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53314228
ENSMUSG00000026098.14_53245983_53321137_1	chr1	-	1358	7	ISM	ENSMUSG00000026098.14	ENST00000624204.3	2682	11	94	17521	94	-9746	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCCACGCCTTGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	53321137	53245982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53314228_53314412_53321099
ENSMUSG00000026098.14_53246056_53321170_1	chr1	-	1318	7	ISM	ENSMUSG00000026098.14	ENST00000624204.3	2682	11	61	17594	61	-9819	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATGGGAGAGAATATCGA	NA	NA	NA	NA	NA	NA	NA	NA	53321170	53246055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53314228_53314412_53321099
ENSMUSG00000026098.14_53246101_53321226_1	chr1	-	1329	7	ISM	ENSMUSG00000026098.14	ENST00000624204.3	2682	11	5	17639	5	-9864	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAATCTGTGCAGACGA	NA	NA	NA	NA	NA	NA	NA	NA	53321226	53246100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53314228_53314412_53321099
ENSMUSG00000026102.10_52826631_52830963_1	chr1	-	2863	2	ISM	ENSMUSG00000026102.10	ENSMUST00000027271.9	5767	6	25884	2045	25884	1963	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCCTGTGATAAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	52830963	52826630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_52829377_52830846
ENSMUSG00000026102.10_52827284_52856620_1	chr1	-	2842	6	FSM	ENSMUSG00000026102.10	ENSMUST00000027271.9	5767	6	227	2698	227	1310	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTTTTCTAACTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	52856620	52827283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_52829377_52830846_52831022_52833628_52833830_52836199_52836261_52838443_52838696_52856560
ENSMUSG00000026102.10_52827435_52856779_1	chr1	-	2850	6	FSM	ENSMUSG00000026102.10	ENSMUST00000027271.9	5767	6	68	2849	68	1159	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTGAAGTATGCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	52856779	52827434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_52829377_52830846_52831022_52833628_52833830_52836199_52836261_52838443_52838696_52856560
ENSMUSG00000026102.10_52828594_52857034_1	chr1	-	1836	6	FSM	ENSMUSG00000026102.10	ENST00000322522.8	1836	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGGGAGGAGCAAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	52857034	52828593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_52829377_52830846_52831022_52833628_52833830_52836199_52836261_52838443_52838696_52856670
ENSMUSG00000026107.12_51508647_51517436_1	chr1	-	2716	6	FSM	ENSMUSG00000026107.12	ENSMUST00000027279.12	2838	6	122	0	122	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATAGGAGTAACAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	51517436	51508646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51516983
ENSMUSG00000026109.15_50967026_51171363_1	chr1	+	679	6	ISM	ENSMUSG00000026109.15	ENSMUST00000081851.4	3343	10	348	55066	348	-54533	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTATGATAATGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	50967025	51171363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_50967279_50969707_50969818_50977371_50977502_50982355_50982383_51110626_51110724_51171301
ENSMUSG00000026109.15_50977403_51221013_1	chr1	+	674	7	ISM	ENSMUSG00000026109.15	ENSMUST00000081851.4	3343	10	10725	5416	10725	-4883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATTGCTGTCATCTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	50977402	51221013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_50977502_50982355_50982383_51110626_51110724_51171301_51171451_51172217_51172278_51219410_51219535_51220895
ENSMUSG00000026109.15_51171360_51224787_1	chr1	+	678	5	ISM	ENSMUSG00000026109.15	ENST00000272771.10	2811	9	204682	1109	204682	-1109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTATGTATGGATATATT	NA	NA	NA	NA	NA	NA	NA	NA	51171359	51224787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_51171451_51172217_51172278_51219410_51219535_51220895_51221055_51224543
ENSMUSG00000026109.15_51219447_51224985_1	chr1	+	689	3	ISM	ENSMUSG00000026109.15	ENST00000272771.10	2811	9	252769	911	252769	-911	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTACGCAGACAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	51219446	51224985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_51219535_51220895_51221055_51224543
ENSMUSG00000026111.16_37469441_37477824_1	chr1	+	777	6	FSM	ENSMUSG00000026111.16	ENSMUST00000118059.3	1179	6	158	244	158	-241	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGGCTGTCGCTGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	37469440	37477824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_37469509_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
ENSMUSG00000026112.8_37458206_37469081_1	chr1	-	1719	3	FSM	ENSMUSG00000026112.8	ENSMUST00000027286.7	3863	3	103	2041	103	-2041	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTAGTTCTGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	37469081	37458205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_37459709_37467422_37467507_37468949
ENSMUSG00000026113.18_37403188_37438001_1	chr1	+	2535	20	ISM	ENSMUSG00000026113.18	ENST00000409540.7	2978	23	6241	4770	-5110	-637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGAGGCTGCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	37403187	37438001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_37403310_37405243_37405361_37405619_37405700_37405950_37406063_37406837_37406929_37407357_37407506_37408438_37408570_37410782_37410888_37411391_37411515_37416658_37416843_37417921_37418141_37419002_37419142_37422419_37422453_37426778_37426952_37427867_37427992_37428730_37428858_37429129_37429271_37432023_37432122_37435150_37435264_37437846
ENSMUSG00000026113.18_37405295_37442604_1	chr1	+	2437	20	ISM	ENSMUSG00000026113.18	ENST00000409540.7	2978	23	8348	167	-3003	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTTCTCTGTTCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	37405294	37442604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_37405361_37405619_37405700_37405950_37406063_37406837_37406929_37407357_37407506_37408438_37408570_37410782_37410888_37411391_37411515_37416658_37416843_37417921_37418141_37419002_37419142_37422419_37422453_37426778_37426952_37427867_37427992_37428730_37428858_37429129_37429271_37432023_37432122_37435150_37435264_37437846_37438002_37442529
ENSMUSG00000026113.18_37405658_37442771_1	chr1	+	2500	19	ISM	ENSMUSG00000026113.18	ENST00000409540.7	2978	23	8711	0	-2640	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACCAAACTGGACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	37405657	37442771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_37405700_37405950_37406063_37406837_37406929_37407357_37407506_37408438_37408570_37410782_37410888_37411391_37411515_37416658_37416843_37417921_37418141_37419002_37419142_37422419_37422453_37426778_37426952_37427867_37427992_37428730_37428858_37429129_37429271_37432023_37432122_37435150_37435264_37437846_37438002_37442529
ENSMUSG00000026114.15_37283964_37300710_1	chr1	+	1283	4	ISM	ENSMUSG00000026114.15	ENST00000436404.6	1846	5	3052	403	3052	-403	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTTGTGGTCCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	37283963	37300710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_37284099_37293037_37293146_37297073_37297181_37299777
ENSMUSG00000026114.15_37284023_37300753_1	chr1	+	1267	4	ISM	ENSMUSG00000026114.15	ENST00000436404.6	1846	5	3111	360	3111	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCATCTTAAACATTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	37284022	37300753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_37284099_37293037_37293146_37297073_37297181_37299777
ENSMUSG00000026114.15_37297071_37300992_1	chr1	+	1325	2	ISM	ENSMUSG00000026114.15	ENST00000436404.6	1846	5	16159	121	16159	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTACCTGGAGTCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	37297070	37300992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_37297181_37299777
ENSMUSG00000026123.12_34889073_34916165_1	chr1	+	783	8	FSM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	0	2496	0	-2496	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGCAGTAATTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	34889072	34916165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ENSMUSG00000026123.12_34902177_34916347_1	chr1	+	758	6	ISM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	13104	2314	13104	-2314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCTTTCTTAGGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	34902176	34916347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ENSMUSG00000026123.12_34903554_34916571_1	chr1	+	816	4	ISM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	14481	2090	14481	-2090	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGGCTGGTGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	34903553	34916571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_34903594_34905221_34905312_34908380_34908487_34915991
ENSMUSG00000026127.14_34479122_34483333_1	chr1	+	743	7	ISM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	190	5104	190	-5104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGATTTGAGCTCAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	34479121	34483333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276
ENSMUSG00000026127.14_34482010_34483523_1	chr1	+	717	7	ISM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	3078	4914	3078	-4914	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGGGTCTTCCTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	34482009	34483523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438
ENSMUSG00000026127.14_34482696_34483811_1	chr1	+	778	5	ISM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	3764	4626	3764	-4626	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGGAAAGTGGTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	34482695	34483811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438
ENSMUSG00000026127.14_34482966_34483941_1	chr1	+	711	4	ISM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	4034	4496	4034	-4496	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTCCTCTAACTGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	34482965	34483941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_34483005_34483077_34483173_34483276_34483351_34483438
ENSMUSG00000026127.14_34483160_34484060_1	chr1	+	709	3	ISM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	4228	4377	4228	-4377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCATTACTCAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	34483159	34484060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_34483173_34483276_34483351_34483438
ENSMUSG00000026131.21_34218541_34220919_1	chr1	+	1743	2	ISM	ENSMUSG00000026131.21	ENST00000370765.11	8776	24	19144	2037	19130	-2037	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGTCATTGACCCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	34218540	34220919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_34219580_34220215
ENSMUSG00000026131.21_34218793_34221145_1	chr1	+	1717	2	ISM	ENSMUSG00000026131.21	ENST00000370765.11	8776	24	19396	1811	19382	-1811	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCCAATCTCAACATAGA	NA	NA	NA	NA	NA	NA	NA	NA	34218792	34221145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_34219580_34220215
ENSMUSG00000026131.21_34219271_34221627_1	chr1	+	1721	2	ISM	ENSMUSG00000026131.21	ENST00000370765.11	8776	24	19874	1329	19860	-1329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCATCGATCCCCTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	34219270	34221627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_34219580_34220215
ENSMUSG00000026134.12_33492891_33669436_1	chr1	-	1257	9	ISM	ENSMUSG00000026134.12	ENSMUST00000027312.11	1975	14	39440	0	39440	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGCAAGTGGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	33669436	33492890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418
ENSMUSG00000026134.12_33493196_33702877_1	chr1	-	1171	11	ISM	ENSMUSG00000026134.12	ENSMUST00000027312.11	1975	14	5999	305	5999	-305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAGGGGCTGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	33702877	33493195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33701326_33701448_33702857
ENSMUSG00000026134.12_33493334_33706144_1	chr1	-	1112	12	ISM	ENSMUSG00000026134.12	ENSMUST00000027312.11	1975	14	2732	443	2732	-443	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCGCATCCTAACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	33706144	33493333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33701326_33701448_33702857_33702938_33706125
ENSMUSG00000026134.12_33519539_33708045_1	chr1	-	1183	11	ISM	ENSMUSG00000026134.12	ENSMUST00000027312.11	1975	14	831	26648	831	-26648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTCCACTTCTGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	33708045	33519538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33701326_33701448_33702857_33702938_33706125_33706230_33707938
ENSMUSG00000026134.12_33523845_33708745_1	chr1	-	1115	11	ISM	ENSMUSG00000026134.12	ENSMUST00000027312.11	1975	14	131	30954	131	-30954	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGCAAGAGGACAGACTA	NA	NA	NA	NA	NA	NA	NA	NA	33708745	33523844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33701326_33701448_33702857_33702938_33706125_33706230_33707938_33708102_33708704
ENSMUSG00000026134.12_33551097_33708876_1	chr1	-	1201	10	ISM	ENSMUSG00000026134.12	ENSMUST00000027312.11	1975	14	0	58206	0	-58206	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATGCTGAAGAGCCATAG	NA	NA	NA	NA	NA	NA	NA	NA	33708876	33551096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33701326_33701448_33702857_33702938_33706125_33706230_33707938_33708102_33708704
ENSMUSG00000026142.16_82294173_82421390_1	chr1	+	1939	7	FSM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	0	1697	0	-1697	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAGAGCGGCAACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	82294172	82421390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ENSMUSG00000026142.16_82318212_82421669_1	chr1	+	1849	6	ISM	ENSMUSG00000026142.16	ENSMUST00000140020.2	3687	7	1442	1418	1442	-1418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATCAAAGGGAGTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	82318211	82421669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ENSMUSG00000026142.16_82320465_82422053_1	chr1	+	1879	5	ISM	ENSMUSG00000026142.16	ENSMUST00000140020.2	3687	7	3695	1034	3695	-1034	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGAGGATCTATGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	82320464	82422053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ENSMUSG00000026147.17_24218377_24278390_1	chr1	+	762	5	FSM	ENSMUSG00000026147.17	ENST00000370496.3	773	5	12	-1	12	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTTTCCCTGGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	24218376	24278390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_24218443_24218555_24218689_24224118_24224516_24233763_24233848_24278308
ENSMUSG00000026150.15_82702611_82729472_1	chr1	+	1255	9	FSM	ENSMUSG00000026150.15	ENSMUST00000078332.13	1894	9	0	639	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGAAATATAAAGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	82702610	82729472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82719538_82719698_82724803_82724864_82728240_82728326_82729305
ENSMUSG00000026150.15_82702611_82729472_2	chr1	+	1096	8	FSM	ENSMUSG00000026150.15	ENSMUST00000160786.8	1645	8	-50	599	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGAAATATAAAGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	82702610	82729472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82724803_82724864_82728240_82728326_82729305
ENSMUSG00000026150.15_82704948_82729472_1	chr1	+	1074	8	FSM	ENSMUSG00000026150.15	ENST00000409616.5	1073	8	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGAAATATAAAGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	82704947	82729472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_82705058_82705787_82705960_82706936_82707158_82708833_82709004_82713139_82713229_82724803_82724864_82728240_82728326_82729305
ENSMUSG00000026150.15_82704948_82729472_2	chr1	+	1068	8	NNC	ENSMUSG00000026150.15	novel	1073	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGAAATATAAAGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	82704947	82729472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_82705058_82705787_82705960_82706942_82707158_82708833_82709004_82713139_82713229_82724803_82724864_82728240_82728326_82729305
ENSMUSG00000026150.15_82704948_82729607_1	chr1	+	1037	7	ISM	ENSMUSG00000026150.15	ENSMUST00000160786.8	1645	8	2287	464	0	136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGTTCAGCCAGTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	82704947	82729607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82724803_82724864_82728240_82728326_82729305
ENSMUSG00000026150.15_82704948_82729607_2	chr1	+	1196	8	ISM	ENSMUSG00000026150.15	ENSMUST00000078332.13	1894	9	2337	504	0	136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGTTCAGCCAGTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	82704947	82729607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82719538_82719698_82724803_82724864_82728240_82728326_82729305
ENSMUSG00000026150.15_82707047_82729879_1	chr1	+	1089	6	ISM	ENSMUSG00000026150.15	ENST00000409616.5	1073	8	2099	-408	97	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGTGCTGTGCAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	82707046	82729879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_82707158_82708833_82709004_82713139_82713229_82724803_82724864_82728240_82728326_82729305
ENSMUSG00000026150.15_82707047_82729879_2	chr1	+	1248	7	ISM	ENSMUSG00000026150.15	ENSMUST00000078332.13	1894	9	4436	232	97	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGTGCTGTGCAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	82707046	82729879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_82707158_82708833_82709004_82713139_82713229_82719538_82719698_82724803_82724864_82728240_82728326_82729305
ENSMUSG00000026150.15_82708871_82730071_1	chr1	+	1133	5	ISM	ENSMUSG00000026150.15	ENST00000409616.5	1073	8	3923	-600	1921	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTATAAATGTAGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	82708870	82730071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_82709004_82713139_82713229_82724803_82724864_82728240_82728326_82729305
ENSMUSG00000026150.15_82708879_82730071_1	chr1	+	1125	5	ISM	ENSMUSG00000026150.15	ENST00000409616.5	1073	8	3931	-600	1929	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTATAAATGTAGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	82708878	82730071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_82709004_82713139_82713229_82724803_82724864_82728240_82728326_82729305
ENSMUSG00000026150.15_82708912_82730071_1	chr1	+	1092	5	ISM	ENSMUSG00000026150.15	ENST00000409616.5	1073	8	3964	-600	1962	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTATAAATGTAGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	82708911	82730071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_82709004_82713139_82713229_82724803_82724864_82728240_82728326_82729305
ENSMUSG00000026150.15_82713191_82729607_1	chr1	+	584	4	ISM	ENSMUSG00000026150.15	ENST00000392059.5	1659	8	8242	505	6241	136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGTTCAGCCAGTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	82713190	82729607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_82713229_82719538_82719698_82728240_82728326_82729305
ENSMUSG00000026150.15_82713191_82730111_1	chr1	+	1148	5	ISM	ENSMUSG00000026150.15	ENSMUST00000078332.13	1894	9	10580	0	6241	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	82713190	82730111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_82713229_82719538_82719698_82724803_82724864_82728240_82728326_82729305
ENSMUSG00000026155.14_23885541_23887523_1	chr1	-	283	2	ISM	ENSMUSG00000026155.14	ENSMUST00000129254.8	1365	10	61247	164	61247	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACGCTGAGCACACAGC	NA	NA	NA	NA	NA	NA	NA	NA	23887523	23885540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_23885645_23887344
ENSMUSG00000026155.14_23885601_23887583_1	chr1	-	283	2	ISM	ENSMUSG00000026155.14	ENSMUST00000129254.8	1365	10	61187	224	61187	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCAGGTTTTGGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	23887583	23885600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_23885645_23887344
ENSMUSG00000026155.14_23916833_23961222_1	chr1	-	281	3	ISM	ENSMUSG00000026155.14	ENSMUST00000027339.14	2289	10	176	32127	176	-31456	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAATCTTCCAGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	23961222	23916832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_23916876_23930940_23931075_23961118
ENSMUSG00000026156.9_23801970_23854447_1	chr1	+	270	2	ISM	ENSMUSG00000026156.9	ENST00000615536.1	2159	4	254	31221	254	-373	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCAGAATGCATGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	23801969	23854447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_23802094_23854301
ENSMUSG00000026156.9_23801970_23854447_2	chr1	+	269	2	NNC	ENSMUSG00000026156.9	novel	2159	4	NA	NA	254	-373	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	285	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCAGAATGCATGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	23801969	23854447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_23802094_23854302
ENSMUSG00000026156.9_23854301_23884038_1	chr1	+	231	2	ISM	ENSMUSG00000026156.9	ENST00000615536.1	2159	4	52585	1630	52585	-1630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTTTCTAAAGCAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	23854300	23884038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_23854447_23883953
ENSMUSG00000026159.14_82817204_82848434_1	chr1	+	530	3	ISM	ENSMUSG00000026159.14	ENST00000409979.6	2076	14	20	24409	0	-24409	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGACAGATCTTCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	82817203	82848434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_82817611_82836076_82836171_82848405
ENSMUSG00000026159.14_82817218_82848478_1	chr1	+	560	3	ISM	ENSMUSG00000026159.14	ENST00000409979.6	2076	14	34	24365	0	-24365	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGAAAGAGTTTCTACAA	NA	NA	NA	NA	NA	NA	NA	NA	82817217	82848478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_82817611_82836076_82836171_82848405
ENSMUSG00000026159.14_82848473_82858519_1	chr1	+	538	5	ISM	ENSMUSG00000026159.14	ENST00000409979.6	2076	14	31289	14324	31078	-14324	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTCCAGGCTGCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	82848472	82858519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82858467
ENSMUSG00000026159.14_82853102_82860069_1	chr1	+	537	5	ISM	ENSMUSG00000026159.14	ENST00000409979.6	2076	14	35918	12774	35707	-12774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGTTTCAACAAACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	82853101	82860069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_82853172_82853891_82854046_82857728_82857849_82858467_82858540_82859948
ENSMUSG00000026159.14_82853959_82860971_1	chr1	+	559	5	ISM	ENSMUSG00000026159.14	ENST00000409979.6	2076	14	36775	11872	36564	-11872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCAAGTGCATCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	82853958	82860971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_82854046_82857728_82857849_82858467_82858540_82859948_82860159_82860901
ENSMUSG00000026159.14_82858495_82864108_1	chr1	+	526	5	ISM	ENSMUSG00000026159.14	ENST00000409979.6	2076	14	41311	8735	41100	-8735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCATTTGTTGCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	82858494	82864108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_82858540_82859948_82860159_82860901_82861083_82863831_82863909_82864095
ENSMUSG00000026162.9_75006715_75094798_1	chr1	-	733	6	ISM	ENSMUSG00000026162.9	ENSMUST00000152855.3	1586	8	7046	417	7046	-417	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTCCAACTCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	75094798	75006714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75006928_75007327_75007435_75007953_75008072_75084467_75084527_75085659_75085799_75094701
ENSMUSG00000026162.9_75006784_75094870_1	chr1	-	736	6	ISM	ENSMUSG00000026162.9	ENSMUST00000152855.3	1586	8	6974	486	6974	-486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGAGCATCCCTCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	75094870	75006783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75006928_75007327_75007435_75007953_75008072_75084467_75084527_75085659_75085799_75094701
ENSMUSG00000026167.15_74831187_74832594_1	chr1	+	329	2	ISM	ENSMUSG00000026167.15	ENSMUST00000006718.15	2468	4	512	10744	512	-10744	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCCCGGCCTGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	74831186	74832594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74831443_74832521
ENSMUSG00000026167.15_74831276_74832686_1	chr1	+	332	2	ISM	ENSMUSG00000026167.15	ENSMUST00000006718.15	2468	4	601	10652	601	-10652	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGTGCCAGCATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	74831275	74832686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74831443_74832521
ENSMUSG00000026167.15_74831348_74832746_1	chr1	+	320	2	ISM	ENSMUSG00000026167.15	ENSMUST00000006718.15	2468	4	673	10592	673	-10592	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAAGTCCCCTACGAGA	NA	NA	NA	NA	NA	NA	NA	NA	74831347	74832746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74831443_74832521
ENSMUSG00000026167.15_74839843_74842416_1	chr1	+	364	2	ISM	ENSMUSG00000026167.15	ENSMUST00000006718.15	2468	4	9168	922	9168	-922	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCTCATCCGGCCGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	74839842	74842416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74840072_74842281
ENSMUSG00000026167.15_74839944_74842487_1	chr1	+	334	2	ISM	ENSMUSG00000026167.15	ENSMUST00000006718.15	2468	4	9269	851	9269	-851	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGGCACTCCAGGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	74839943	74842487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74840072_74842281
ENSMUSG00000026167.15_74840000_74842535_1	chr1	+	326	2	ISM	ENSMUSG00000026167.15	ENSMUST00000006718.15	2468	4	9325	803	9325	-803	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTGAGAAATCTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	74839999	74842535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74840072_74842281
ENSMUSG00000026171.13_74632907_74637889_1	chr1	-	1266	8	ISM	ENSMUSG00000026171.13	ENSMUST00000113721.8	1451	10	2647	-5	2647	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGTGGTATGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	74637889	74632906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74633562_74633718_74633854_74634367_74634458_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851
ENSMUSG00000026171.13_74632907_74637951_1	chr1	-	1328	8	ISM	ENSMUSG00000026171.13	ENSMUST00000113721.8	1451	10	2585	-5	2585	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGTGGTATGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	74637951	74632906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74633562_74633718_74633854_74634367_74634458_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851
ENSMUSG00000026172.13_74627459_74630215_1	chr1	+	983	6	ISM	ENSMUSG00000026172.13	ENSMUST00000113733.10	1488	8	11	1068	0	-1068	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCACAGCAGAGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	74627458	74630215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74627553_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118
ENSMUSG00000026172.13_74627533_74629195_1	chr1	+	584	3	ISM	ENSMUSG00000026172.13	ENSMUST00000027358.11	1890	8	74	2407	0	-2088	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTCACCTTCACGGCC	NA	NA	NA	NA	NA	NA	NA	NA	74627532	74629195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74627647_74628644_74629038_74629118
ENSMUSG00000026172.13_74628806_74631024_1	chr1	+	963	7	ISM	ENSMUSG00000026172.13	ENSMUST00000113732.2	1679	8	1273	324	1273	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGTGGGCTACTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	74628805	74631024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ENSMUSG00000026172.13_74628877_74631060_1	chr1	+	928	7	ISM	ENSMUSG00000026172.13	ENSMUST00000113732.2	1679	8	1344	288	1344	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTCCAGAGGTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	74628876	74631060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ENSMUSG00000026172.13_74628940_74631143_1	chr1	+	948	7	ISM	ENSMUSG00000026172.13	ENSMUST00000113732.2	1679	8	1407	205	1407	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTCCTGCCCAGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	74628939	74631143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ENSMUSG00000026172.13_74629118_74631283_1	chr1	+	991	6	ISM	ENSMUSG00000026172.13	ENSMUST00000113732.2	1679	8	1585	65	1585	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTTGTGCCTTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	74629117	74631283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ENSMUSG00000026172.13_74630748_74631408_1	chr1	+	546	2	ISM	ENSMUSG00000026172.13	ENSMUST00000113732.2	1679	8	3215	-60	3215	60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTGTTAATGGAAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	74630747	74631408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74630866_74630980
ENSMUSG00000026172.13_74630849_74631602_1	chr1	+	639	2	ISM	ENSMUSG00000026172.13	ENSMUST00000027358.11	1890	8	3390	0	3316	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCTGCCTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	74630848	74631602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74630866_74630980
ENSMUSG00000026174.10_74545344_74568570_1	chr1	+	1710	8	FSM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	127	1431	127	-1431	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTAGCTGCATAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	74545343	74568570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ENSMUSG00000026174.10_74556259_74568872_1	chr1	+	1705	7	ISM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	11042	1129	11042	-1129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGTATTGGGGCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	74556258	74568872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ENSMUSG00000026174.10_74556316_74568918_1	chr1	+	1694	7	ISM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	11099	1083	11099	-1083	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGAAGATAATTTCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	74556315	74568918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ENSMUSG00000026174.10_74556364_74568971_1	chr1	+	1699	7	ISM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	11147	1030	11147	-1030	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTAGACTACTTGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	74556363	74568971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ENSMUSG00000026174.10_74558091_74569074_1	chr1	+	1726	6	ISM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	12874	927	12874	-927	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGACTCTGCTGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	74558090	74569074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ENSMUSG00000026174.10_74558138_74569129_1	chr1	+	1734	6	ISM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	12921	872	12921	-872	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAAACTACAGGGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	74558137	74569129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ENSMUSG00000026174.10_74561565_74569230_1	chr1	+	1709	5	ISM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	16348	771	16348	-771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCGATCCTTCCCACCG	NA	NA	NA	NA	NA	NA	NA	NA	74561564	74569230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ENSMUSG00000026174.10_74562686_74569336_1	chr1	+	1770	4	ISM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	17469	665	17469	-665	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTTGAAGATGTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	74562685	74569336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74562773_74566150_74566250_74566750_74566843_74567844
ENSMUSG00000026176.14_74430954_74434682_1	chr1	+	828	7	FSM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	286	1762	286	-1762	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTCAGCCGCGTGGACG	NA	NA	NA	NA	NA	NA	NA	NA	74430953	74434682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_74431124_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
ENSMUSG00000026176.14_74434087_74435291_1	chr1	+	772	2	ISM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	3419	1153	3419	-1153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACACTTGTAAAAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	74434086	74435291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74434182_74434614
ENSMUSG00000026179.15_74371822_74392843_1	chr1	+	2804	9	FSM	ENSMUSG00000026179.15	ENSMUST00000087225.6	2859	9	53	2	53	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAGGTCTGAGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	74371821	74392843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_74371951_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
ENSMUSG00000026181.14_16733024_16743954_1	chr16	+	2878	4	ISM	ENSMUSG00000026181.14	ENSMUST00000027373.12	4922	8	18691	1274	18691	-1274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCTCCTTGGTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	16733023	16743954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16733213_16735523_16735668_16740326_16740421_16741503
ENSMUSG00000026187.10_72349637_72358216_1	chr1	+	486	5	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	3051	75895	3051	-75895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGACCACCTCAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	72349636	72358216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157
ENSMUSG00000026187.10_72349674_72358313_1	chr1	+	546	5	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	3088	75798	3088	-75798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGAAGACGGGCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	72349673	72358313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157
ENSMUSG00000026187.10_72351632_72364249_1	chr1	+	500	5	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	5046	69862	5046	-69862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCGTCTTTAAGAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	72351631	72364249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232
ENSMUSG00000026187.10_72351684_72364298_1	chr1	+	497	5	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	5098	69813	5098	-69813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCATTGGCCCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	72351683	72364298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232
ENSMUSG00000026187.10_72353330_72365394_1	chr1	+	482	5	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	6744	68717	6744	-68717	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTTGGGTAGTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	72353329	72365394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374
ENSMUSG00000026187.10_72358329_72378160_1	chr1	+	493	6	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	11743	55951	11743	-55951	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTAAACATGGTCGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	72358328	72378160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118
ENSMUSG00000026187.10_72365448_72382200_1	chr1	+	504	6	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	18862	51911	18862	-51911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCATGAGCTTGGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	72365447	72382200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167
ENSMUSG00000026187.10_72369083_72382301_1	chr1	+	541	5	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	22497	51810	22497	-51810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGAAAGGAAAGGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	72369082	72382301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167
ENSMUSG00000026187.10_72369171_72385448_1	chr1	+	515	6	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	22585	48663	22585	-48663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATGCTGGATCCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	72369170	72385448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386
ENSMUSG00000026187.10_72378218_72393466_1	chr1	+	526	5	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	31632	40645	31632	-40645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCTGGCAGAAGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	72378217	72393466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401
ENSMUSG00000026187.10_72382225_72420826_1	chr1	+	487	5	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	35639	13285	35639	-13285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACTGTATTTTATGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	72382224	72420826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777
ENSMUSG00000026187.10_72385528_72433075_1	chr1	+	516	7	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	38942	1036	38942	-1036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAAGAAGATACAACGGG	NA	NA	NA	NA	NA	NA	NA	NA	72385527	72433075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054
ENSMUSG00000026187.10_72393465_72433913_1	chr1	+	495	7	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	46879	198	46879	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGCTGCTGAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	72393464	72433913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
ENSMUSG00000026187.10_72422514_72434112_1	chr1	+	486	4	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	75928	-1	75928	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGAAGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	72422513	72434112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72422614_72422860_72422929_72433054_72433127_72433866
ENSMUSG00000026188.12_72336997_72339932_1	chr1	+	431	2	ISM	ENSMUSG00000026188.12	ENST00000406027.2	1853	3	13384	1069	13384	-1069	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCACTCTGACAGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	72336996	72339932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72337338_72339842
ENSMUSG00000026188.12_72337172_72340073_2	chr1	+	397	2	ISM	ENSMUSG00000026188.12	ENST00000406027.2	1853	3	13559	928	13559	-928	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGGTCTTTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	72337171	72340073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72337338_72339842
ENSMUSG00000026189.14_72298528_72306631_1	chr1	-	243	3	ISM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	16842	197	16787	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGAAAGCCAAGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	72306631	72298527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72298593_72301110_72301223_72306565
ENSMUSG00000026189.14_72314093_72316485_1	chr1	-	240	3	ISM	ENSMUSG00000026189.14	ENSMUST00000097698.5	932	7	6933	7938	6933	-7938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTCAATATCATTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	72316485	72314092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72314127_72315324_72315491_72316445
ENSMUSG00000026189.14_72315432_72323312_1	chr1	-	254	3	ISM	ENSMUSG00000026189.14	ENSMUST00000097698.5	932	7	106	9277	106	-9277	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGAGGAGGCCAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	72323312	72315431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72315491_72316445_72316580_72323251
ENSMUSG00000026192.14_71596372_71604055_1	chr1	+	660	7	ISM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	63	14735	63	-14735	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGTATGGGATGAACCCCC	NA	NA	NA	NA	NA	NA	NA	NA	71596371	71604055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969
ENSMUSG00000026192.14_71603646_71612119_1	chr1	+	691	7	ISM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	7337	6671	7337	-6671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGTTTAAGCCAGAAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	71603645	71612119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066
ENSMUSG00000026192.14_71607033_71615902_1	chr1	+	699	7	ISM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	10724	2888	10724	-2888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGCAGAGATCTCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	71607032	71615902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775
ENSMUSG00000026193.16_71632313_71658682_1	chr1	-	3210	20	ISM	ENSMUSG00000026193.16	ENSMUST00000187938.7	7965	45	33649	7631	33638	-7630	internal_fragment	TRUE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCGGTTGTCTGACGCTG	NA	NA	NA	NA	NA	NA	NA	NA	71658682	71632312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_71632395_71634822_71634962_71636439_71636832_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542
ENSMUSG00000026197.13_75145422_75148274_1	chr1	+	1192	9	NNC	ENSMUSG00000026197.13	novel	1316	9	NA	NA	123	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGCTGTTTCTTTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	75145421	75148274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147885
ENSMUSG00000026198.16_75148402_75149283_1	chr1	-	480	4	ISM	ENSMUSG00000026198.16	ENST00000295750.5	2749	18	7688	27	7688	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAAAGCATCGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	75149283	75148401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198
ENSMUSG00000026198.16_75148402_75152801_1	chr1	-	1443	14	ISM	ENSMUSG00000026198.16	ENST00000295750.5	2749	18	4170	27	4170	-27	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAAAGCATCGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	75152801	75148401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733
ENSMUSG00000026198.16_75148757_75154130_1	chr1	-	1451	14	ISM	ENSMUSG00000026198.16	ENST00000295750.5	2749	18	2841	382	2841	-382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCCACACAGGATGAACA	NA	NA	NA	NA	NA	NA	NA	NA	75154130	75148756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946
ENSMUSG00000026198.16_75149500_75154720_1	chr1	-	1365	13	ISM	ENSMUSG00000026198.16	ENST00000295750.5	2749	18	2251	1125	2251	-1125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGAGGTAGAGGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	75154720	75149499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565
ENSMUSG00000026198.16_75150187_75155593_1	chr1	-	1302	13	ISM	ENSMUSG00000026198.16	ENSMUST00000027396.15	2966	19	1443	1826	1378	-1812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGCTGCAGAGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	75155593	75150186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574
ENSMUSG00000026198.16_75150510_75156301_1	chr1	-	1398	13	ISM	ENSMUSG00000026198.16	ENSMUST00000027396.15	2966	19	735	2149	670	-2135	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGGTAAGAGAAATACTAG	NA	NA	NA	NA	NA	NA	NA	NA	75156301	75150509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
ENSMUSG00000026198.16_75151403_75156600_1	chr1	-	1359	9	ISM	ENSMUSG00000026198.16	ENSMUST00000027396.15	2966	19	436	3042	371	-3028	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCCTTGCTGGCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	75156600	75151402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
ENSMUSG00000026200.14_75176379_75178939_1	chr1	-	919	9	ISM	ENSMUSG00000026200.14	ENST00000409640.5	1617	13	6930	244	6930	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGGCCGGTACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	75178939	75176378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177702_75177841_75177932_75178042_75178118_75178386_75178506_75178693_75178735_75178830
ENSMUSG00000026200.14_75176737_75185023_1	chr1	-	847	10	ISM	ENSMUSG00000026200.14	ENST00000409640.5	1617	13	846	602	846	-602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCACTGAGTGGATGATG	NA	NA	NA	NA	NA	NA	NA	NA	75185023	75176736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75176771_75176973_75177106_75177587_75177702_75177841_75177932_75178042_75178118_75178386_75178506_75178693_75178735_75178830_75178953_75179051_75179111_75184962
ENSMUSG00000026200.14_75177038_75185403_1	chr1	-	822	10	ISM	ENSMUSG00000026200.14	ENST00000409640.5	1617	13	466	903	466	-903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGATATATTGCTAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	75185403	75177037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75177106_75177587_75177702_75177841_75177932_75178042_75178118_75178386_75178506_75178693_75178735_75178830_75178953_75179051_75179111_75184962_75185024_75185330
ENSMUSG00000026200.14_75177596_75185785_1	chr1	-	910	10	ISM	ENSMUSG00000026200.14	ENST00000409640.5	1617	13	84	1461	84	-1461	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACGGGGTAAGAACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	75185785	75177595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75177702_75177841_75177932_75178042_75178118_75178386_75178506_75178693_75178735_75178830_75178953_75179051_75179111_75184962_75185024_75185330_75185482_75185699
ENSMUSG00000026201.13_75187520_75189799_1	chr1	+	850	6	ISM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	38	2451	38	-876	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCCTACCGGGCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	75187519	75189799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776
ENSMUSG00000026201.13_75187636_75189831_1	chr1	+	766	6	ISM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	154	2419	154	-844	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAAGCCACTGTGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	75187635	75189831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776
ENSMUSG00000026201.13_75187884_75190341_1	chr1	+	868	6	ISM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	402	1909	4	-334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGCAGGAAGAAGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	75187883	75190341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219
ENSMUSG00000026201.13_75188021_75190557_1	chr1	+	831	7	ISM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	539	1693	141	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACCAGCTCCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	75188020	75190557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
ENSMUSG00000026201.13_75189268_75190660_1	chr1	+	652	5	ISM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	1786	1590	1388	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTCTTCCAGGATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	75189267	75190660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
ENSMUSG00000026201.13_75189527_75190886_1	chr1	+	771	4	ISM	ENSMUSG00000026201.13	ENST00000409516.7	736	5	1647	-211	1647	211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	75189526	75190886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75189651_75189776_75189873_75190219_75190342_75190457
ENSMUSG00000026202.14_75192600_75193519_1	chr1	-	687	2	ISM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	2419	1728	2419	-1728	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGCATCCAGTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	75193519	75192599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75193238_75193470
ENSMUSG00000026202.14_75192819_75193920_1	chr1	-	633	3	ISM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	2018	1947	2018	-1947	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTCCCCTTGGCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	75193920	75192818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75193238_75193470_75193620_75193855
ENSMUSG00000026202.14_75192870_75194058_1	chr1	-	720	3	ISM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	1880	1998	1880	-1998	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGGACCTGACAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	75194058	75192869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75193238_75193470_75193620_75193855
ENSMUSG00000026202.14_75193079_75195887_1	chr1	-	582	4	FSM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	51	2207	51	-2207	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCTGTAGTGGAGCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	75195887	75193078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_75193238_75193470_75193620_75193855_75194079_75195836
ENSMUSG00000026203.17_75213050_75221571_1	chr1	+	2305	9	FSM	ENSMUSG00000026203.17	ENSMUST00000188931.7	3066	9	0	761	0	123	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGGTGGAGACTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	75213049	75221571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101
ENSMUSG00000026203.17_75214134_75221879_1	chr1	+	2297	7	ISM	ENSMUSG00000026203.17	ENSMUST00000082158.13	1253	9	1025	-431	934	431	intron_retention	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTCGGGTTGAAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	75214133	75221879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101
ENSMUSG00000026203.17_75217841_75222334_1	chr1	+	2381	3	ISM	ENSMUSG00000026203.17	ENSMUST00000187058.7	1732	9	4641	0	4641	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGGTGGCCTGTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	75217840	75222334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75217918_75218052_75218124_75220101
ENSMUSG00000026205.9_75102512_75108837_1	chr1	-	613	6	ISM	ENSMUSG00000026205.9	ENST00000295738.11	1561	11	1736	140	1697	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCACTGCCTCTGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	75108837	75102511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75102663_75102985_75103082_75105116_75105285_75105547_75105654_75108304_75108351_75108791
ENSMUSG00000026205.9_75102624_75109308_1	chr1	-	615	7	ISM	ENSMUSG00000026205.9	ENST00000295738.11	1561	11	1265	252	1226	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTTTCACTGCCCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	75109308	75102623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75102663_75102985_75103082_75105116_75105285_75105547_75105654_75108304_75108351_75108791_75108886_75109242
ENSMUSG00000026205.9_75105116_75109672_1	chr1	-	675	6	ISM	ENSMUSG00000026205.9	ENST00000295738.11	1561	11	901	2744	862	-2744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTGGGTGGAGGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	75109672	75105115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75105285_75105547_75105654_75108304_75108351_75108791_75108886_75109242_75109425_75109594
ENSMUSG00000026205.9_75105226_75109914_1	chr1	-	640	7	ISM	ENSMUSG00000026205.9	ENST00000295738.11	1561	11	659	2854	620	-2854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGACATTGACTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	75109914	75105225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75105285_75105547_75105654_75108304_75108351_75108791_75108886_75109242_75109425_75109594_75109672_75109838
ENSMUSG00000026205.9_75108836_75110383_1	chr1	-	620	6	ISM	ENSMUSG00000026205.9	ENST00000295738.11	1561	11	190	6464	151	-6464	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAACTCACATTTGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	75110383	75108835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75108886_75109242_75109425_75109594_75109672_75109838_75109937_75110044_75110203_75110328
ENSMUSG00000026205.9_75109314_75110534_1	chr1	-	650	5	ISM	ENSMUSG00000026205.9	ENST00000295738.11	1561	11	39	6942	0	-6942	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGGCAGGGCTTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	75110534	75109313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75109425_75109594_75109672_75109838_75109937_75110044_75110203_75110328
ENSMUSG00000026208.10_75337375_75339047_1	chr1	+	414	3	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	402	6176	402	-6176	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1521	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTACTGGGAGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	75337374	75339047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75337637_75338801_75338863_75338956
ENSMUSG00000026208.10_75337487_75339244_1	chr1	+	343	4	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	514	5979	514	-5979	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1010	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTCCAGGTGGAGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	75337486	75339244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75337637_75338801_75338863_75338956_75339053_75339208
ENSMUSG00000026208.10_75337538_75339294_1	chr1	+	342	4	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	565	5929	565	-5929	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	990	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGACATCCGGGCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	75337537	75339294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75337637_75338801_75338863_75338956_75339053_75339208
ENSMUSG00000026208.10_75337592_75339342_1	chr1	+	336	4	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	619	5881	619	-5881	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	968	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGCTGAAGAATGGTACA	NA	NA	NA	NA	NA	NA	NA	NA	75337591	75339342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75337637_75338801_75338863_75338956_75339053_75339208
ENSMUSG00000026208.10_75338956_75339663_1	chr1	+	385	3	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	1983	5560	1983	-5560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCCTCCCCATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	75338955	75339663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75339053_75339208_75339371_75339537
ENSMUSG00000026208.10_75339208_75340143_1	chr1	+	318	3	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	2235	5080	2235	-5080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGGATCGCTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	75339207	75340143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75339371_75339537_75339664_75340114
ENSMUSG00000026208.10_75339296_75340282_1	chr1	+	369	3	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	2323	4941	2323	-4941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATGTGGAGATCGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	75339295	75340282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75339371_75339537_75339664_75340114
ENSMUSG00000026208.10_75339536_75342015_1	chr1	+	393	3	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	2563	3208	2563	-3208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGGGCTGGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	75339535	75342015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75339664_75340114_75340336_75341971
ENSMUSG00000026208.10_75339637_75343435_1	chr1	+	324	4	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	2664	1788	2664	-1788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACCAAAAAGACAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	75339636	75343435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75339664_75340114_75340336_75341971_75342016_75343403
ENSMUSG00000026208.10_75340171_75343683_1	chr1	+	323	4	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	3198	1540	3198	-1540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCTGTAAGCCAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	75340170	75343683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75340336_75341971_75342016_75343403_75343487_75343652
ENSMUSG00000026208.10_75340214_75343741_1	chr1	+	338	4	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	3241	1482	3241	-1482	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1064	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTTCCACTCTCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	75340213	75343741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75340336_75341971_75342016_75343403_75343487_75343652
ENSMUSG00000026208.10_75340266_75343790_1	chr1	+	335	4	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	3293	1433	3293	-1433	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1021	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCTGACCCCCCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	75340265	75343790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75340336_75341971_75342016_75343403_75343487_75343652
ENSMUSG00000026208.10_75343474_75343967_1	chr1	+	328	2	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	6501	1256	6501	-1256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1025	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTGGCTTAGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	75343473	75343967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75343487_75343652
ENSMUSG00000026209.16_75284584_75294091_1	chr1	-	2254	15	FSM	ENSMUSG00000026209.16	ENSMUST00000066668.14	2488	15	190	44	190	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAACCATTGTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	75294091	75284583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
ENSMUSG00000026209.16_75284776_75294281_1	chr1	-	2252	15	FSM	ENSMUSG00000026209.16	ENSMUST00000066668.14	2488	15	0	236	0	-192	multi-exon	FALSE	canonical	NA	NA	NA	NA	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTCTTGCAGAAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	75294281	75284775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
ENSMUSG00000026209.16_75285209_75289209_1	chr1	-	616	5	ISM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	4380	0	4380	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	75289209	75285208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048
ENSMUSG00000026209.16_75286053_75291836_1	chr1	-	586	7	ISM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	1753	844	1753	-844	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGACTGGGGCTTCGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	75291836	75286052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773
ENSMUSG00000026209.16_75288435_75292064_1	chr1	-	650	7	ISM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	1525	3226	1525	-3226	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGCATCTTTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	75292064	75288434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988
ENSMUSG00000026209.16_75289112_75292659_1	chr1	-	646	7	ISM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	930	3903	930	-3903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATACCTAAGTCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	75292659	75289111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588
ENSMUSG00000026209.16_75292263_75293589_1	chr1	-	609	6	ISM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	0	7054	0	-7054	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCACATTCGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	75293589	75292262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293534
ENSMUSG00000026211.19_75462469_75480175_1	chr1	-	4173	18	ISM	ENSMUSG00000026211.19	ENSMUST00000113567.10	5679	20	2830	0	2830	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTGTGTGCCACGA	NA	NA	NA	NA	NA	NA	NA	NA	75480175	75462468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75462604_75463283_75463554_75463866_75463972_75464272_75464435_75464549_75464707_75465232_75465346_75466126_75466394_75467439_75467713_75467831_75468102_75469149_75469438_75469513_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010
ENSMUSG00000026211.19_75464317_75482010_1	chr1	-	4130	17	ISM	ENSMUSG00000026211.19	ENSMUST00000113567.10	5679	20	995	1848	995	-1848	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCGCGCTGAGACCCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	75482010	75464316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75464435_75464549_75464707_75465232_75465346_75466126_75466394_75467439_75467713_75467831_75468102_75469149_75469438_75469513_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ENSMUSG00000026211.19_75464389_75482079_1	chr1	-	4127	17	ISM	ENSMUSG00000026211.19	ENSMUST00000113567.10	5679	20	926	1920	926	-1920	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGGAGACGGCGCCACGT	NA	NA	NA	NA	NA	NA	NA	NA	75482079	75464388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75464435_75464549_75464707_75465232_75465346_75466126_75466394_75467439_75467713_75467831_75468102_75469149_75469438_75469513_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ENSMUSG00000026211.19_75466262_75482523_1	chr1	-	4120	14	ISM	ENSMUSG00000026211.19	ENSMUST00000113567.10	5679	20	482	3793	482	-3793	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCCCAAGTGCCACATT	NA	NA	NA	NA	NA	NA	NA	NA	75482523	75466261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75466394_75467439_75467713_75467831_75468102_75469149_75469438_75469513_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ENSMUSG00000026211.19_75466324_75482604_1	chr1	-	4139	14	ISM	ENSMUSG00000026211.19	ENSMUST00000113567.10	5679	20	401	3855	401	-3855	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGCTGTCCCAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	75482604	75466323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75466394_75467439_75467713_75467831_75468102_75469149_75469438_75469513_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ENSMUSG00000026219.15_84702298_84705880_1	chr1	-	586	5	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	110550	87	110550	-67	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCATGATTTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	84705880	84702297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845
ENSMUSG00000026219.15_84702405_84705928_1	chr1	-	527	5	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	110502	194	110502	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAATGCGGGACAAACT	NA	NA	NA	NA	NA	NA	NA	NA	84705928	84702404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845
ENSMUSG00000026219.15_84705846_84709753_1	chr1	-	505	4	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	106677	3635	106677	-3615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTATTGTCCCGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	84709753	84705845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84706011_84708252_84708418_84709343_84709499_84709733
ENSMUSG00000026219.15_84705963_84714772_1	chr1	-	553	5	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	101658	3752	101658	-3732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCAGTGGAAGATCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	84714772	84705962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702
ENSMUSG00000026219.15_84708365_84716494_1	chr1	-	518	5	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	99936	6154	99936	-6134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGACATCTCATGATT	NA	NA	NA	NA	NA	NA	NA	NA	84716494	84708364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398
ENSMUSG00000026219.15_84709776_84719984_1	chr1	-	549	5	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	96446	7565	96446	-7545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTGGAGGGGTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	84719984	84709775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907
ENSMUSG00000026219.15_84716487_84721617_1	chr1	-	569	5	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	94813	14276	94813	-14256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCAAAGATTACTTGATA	NA	NA	NA	NA	NA	NA	NA	NA	84721617	84716486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540
ENSMUSG00000026219.15_84720922_84724970_1	chr1	-	540	5	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	91460	18711	91460	-18691	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAAAGTACTAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	84724970	84720921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898
ENSMUSG00000026219.15_84721655_84726998_1	chr1	-	605	5	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	89432	19444	89432	-19424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCAGGCAGTGCGGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	84726998	84721654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878
ENSMUSG00000026219.15_84721722_84726998_1	chr1	-	538	5	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	89432	19511	89432	-19491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGGAAATGTAAGGCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	84726998	84721721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878
ENSMUSG00000026219.15_84722762_84728132_1	chr1	-	543	4	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	88298	20551	88298	-20531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTGAGAGATACCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	84728132	84722761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84722907_84724898_84725051_84726878_84727071_84728078
ENSMUSG00000026219.15_84724922_84729328_1	chr1	-	532	4	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	87102	22711	87102	-22691	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGGAACGGAGCTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	84729328	84724921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84725051_84726878_84727071_84728078_84728221_84729259
ENSMUSG00000026219.15_84724973_84729388_1	chr1	-	541	4	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	87042	22762	87042	-22742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTCTCAGCCAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	84729388	84724972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84725051_84726878_84727071_84728078_84728221_84729259
ENSMUSG00000026219.15_84725031_84729434_1	chr1	-	529	4	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	86996	22820	86996	-22800	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGAGTAGAACCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	84729434	84725030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84725051_84726878_84727071_84728078_84728221_84729259
ENSMUSG00000026219.15_84729384_84735514_1	chr1	-	551	5	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	80916	27173	80916	-27153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATCCAAAAACATGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	84735514	84729383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442
ENSMUSG00000026219.15_84732124_84738541_1	chr1	-	555	5	ISM	ENSMUSG00000026219.15	ENST00000389044.8	6401	42	78529	29893	77889	28424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGGATCCCTGGGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	84738541	84732123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483
ENSMUSG00000026219.15_84735234_84738775_1	chr1	-	526	5	ISM	ENSMUSG00000026219.15	ENST00000389044.8	6401	42	78295	33003	77655	25314	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAGACCTGAAGATAGTA	NA	NA	NA	NA	NA	NA	NA	NA	84738775	84735233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731
ENSMUSG00000026219.15_84735530_84739635_1	chr1	-	541	5	ISM	ENSMUSG00000026219.15	ENST00000389044.8	6401	42	77435	33299	76795	25018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGCCTTAGAGCAATTC	NA	NA	NA	NA	NA	NA	NA	NA	84739635	84735529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584
ENSMUSG00000026219.15_84735582_84739685_1	chr1	-	539	5	ISM	ENSMUSG00000026219.15	ENST00000389044.8	6401	42	77385	33351	76745	24966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCTCTATGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	84739685	84735581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584
ENSMUSG00000026219.15_84735643_84739730_1	chr1	-	523	5	ISM	ENSMUSG00000026219.15	ENST00000389044.8	6401	42	77340	33412	76700	24905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCGAGCACAGCTAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	84739730	84735642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584
ENSMUSG00000026219.15_84736693_84739908_1	chr1	-	585	5	ISM	ENSMUSG00000026219.15	ENST00000389044.8	6401	42	77162	34462	76522	23855	internal_fragment	TRUE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATCCCTTGACTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	84739908	84736692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839
ENSMUSG00000026219.15_84738508_84741100_1	chr1	-	538	5	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	75330	36297	75330	22040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATTGACAGCCGGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	84741100	84738507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048
ENSMUSG00000026219.15_84738618_84741210_1	chr1	-	538	5	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	75220	36407	75220	21930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGCATCTTCGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	84741210	84738617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048
ENSMUSG00000026219.15_84741625_84760617_1	chr1	-	559	7	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	55813	39414	55813	18923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCAGGCCTTGACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	84760617	84741624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547
ENSMUSG00000026219.15_84754067_84771392_1	chr1	-	541	5	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	45038	51856	45038	6481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCATAGAACAATTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	84771392	84754066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245
ENSMUSG00000026219.15_84760548_84792690_1	chr1	-	1319	5	ISM	ENSMUSG00000026219.15	ENST00000409677.5	1392	6	24332	0	23740	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATACTGACTGGCACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	84792690	84760547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543
ENSMUSG00000026223.16_85822002_85830805_1	chr1	+	584	2	ISM	ENSMUSG00000026223.16	ENSMUST00000027425.16	2230	6	0	5591	0	-5275	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTGCTCATGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	85822001	85830805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85822511_85830730
ENSMUSG00000026223.16_85822180_85830871_1	chr1	+	472	2	ISM	ENSMUSG00000026223.16	ENSMUST00000185569.2	1465	5	-160	5209	-160	-5209	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAGCCAGGCAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	85822179	85830871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85822511_85830730
ENSMUSG00000026223.16_85822478_85834754_1	chr1	+	500	5	ISM	ENSMUSG00000026223.16	ENSMUST00000027425.16	2230	6	476	1642	138	-1326	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCATCCAGGAGGAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	85822477	85834754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85822511_85830730_85830872_85832934_85833124_85834142_85834254_85834728
ENSMUSG00000026223.16_85830848_85835325_1	chr1	+	533	5	ISM	ENSMUSG00000026223.16	ENSMUST00000027425.16	2230	6	8846	1071	8508	-755	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGAGACGCTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	85830847	85835325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85830872_85832934_85833124_85834142_85834254_85834728_85834880_85835267
ENSMUSG00000026223.16_85832966_85835359_1	chr1	+	512	4	ISM	ENSMUSG00000026223.16	ENSMUST00000027425.16	2230	6	10964	1037	10626	-721	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTCCCTCCAGGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	85832965	85835359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85833124_85834142_85834254_85834728_85834880_85835267
ENSMUSG00000026223.16_85833074_85835512_1	chr1	+	557	4	ISM	ENSMUSG00000026223.16	ENSMUST00000027425.16	2230	6	11072	884	10734	-568	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCTGTGATCTCTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	85833073	85835512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85833124_85834142_85834254_85834728_85834880_85835267
ENSMUSG00000026223.16_85833082_85835512_1	chr1	+	549	4	ISM	ENSMUSG00000026223.16	ENSMUST00000027425.16	2230	6	11080	884	10742	-568	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCTGTGATCTCTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	85833081	85835512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85833124_85834142_85834254_85834728_85834880_85835267
ENSMUSG00000026223.16_85834770_85835659_1	chr1	+	502	2	ISM	ENSMUSG00000026223.16	ENSMUST00000185569.2	1465	5	12430	421	12430	-421	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACATATGGAAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	85834769	85835659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85834880_85835267
ENSMUSG00000026229.18_85992414_85999684_1	chr1	+	368	4	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	73	67189	30	-67189	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATAACTCTGAATATGT	NA	NA	NA	NA	NA	NA	NA	NA	85992413	85999684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548
ENSMUSG00000026229.18_85992414_86005103_1	chr1	+	634	6	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	73	61770	30	-61770	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTCAAACTCTGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	85992413	86005103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077
ENSMUSG00000026229.18_85998304_86005221_1	chr1	+	639	5	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	5963	61652	5920	-61652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTCACTCTGATTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	85998303	86005221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077
ENSMUSG00000026229.18_85999588_86006428_1	chr1	+	620	4	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	7247	60445	7204	-60445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAATCTTCGAACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	85999587	86006428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85999719_86003520_86003727_86005077_86005222_86006289
ENSMUSG00000026229.18_85999634_86006372_1	chr1	+	518	4	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	7293	60501	7250	-60501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATTTGTTTTGATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	85999633	86006372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85999719_86003520_86003727_86005077_86005222_86006289
ENSMUSG00000026229.18_85999695_86006469_1	chr1	+	554	4	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	7354	60404	7311	-60404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGATCTACCAATACGGG	NA	NA	NA	NA	NA	NA	NA	NA	85999694	86006469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85999719_86003520_86003727_86005077_86005222_86006289
ENSMUSG00000026229.18_86003570_86010898_1	chr1	+	619	5	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	11229	55975	11186	-55975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATTAAGATTTTAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	86003569	86010898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868
ENSMUSG00000026229.18_86003648_86010942_1	chr1	+	585	5	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	11307	55931	11264	-55931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTTCCTAATACGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	86003647	86010942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868
ENSMUSG00000026229.18_86003708_86010989_1	chr1	+	572	5	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	11367	55884	11324	-55884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAAGGTAGGAAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	86003707	86010989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868
ENSMUSG00000026229.18_86005078_86012992_1	chr1	+	650	5	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	12737	53881	12694	-53881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATATGCTTGGAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	86005077	86012992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903
ENSMUSG00000026229.18_86006374_86014366_1	chr1	+	571	6	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	14033	52507	13990	-52507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGAAGGGGGCGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	86006373	86014366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296
ENSMUSG00000026229.18_86006438_86014408_1	chr1	+	549	6	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	14097	52465	14054	-52465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCATGGTGGTGACATA	NA	NA	NA	NA	NA	NA	NA	NA	86006437	86014408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296
ENSMUSG00000026229.18_86006478_86014470_1	chr1	+	571	6	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	14137	52403	14094	-52403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATTAGGGTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86006477	86014470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296
ENSMUSG00000026229.18_86009756_86016647_1	chr1	+	652	6	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	17415	50226	17372	-50226	internal_fragment	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTTCCTGGGAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	86009755	86016647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530
ENSMUSG00000026229.18_86010933_86017763_1	chr1	+	567	6	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	18592	49110	18549	-49110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCAGGCGATTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	86010932	86017763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715
ENSMUSG00000026229.18_86012902_86017912_1	chr1	+	653	5	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	20561	48961	20518	-48961	internal_fragment	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATTCTACTTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	86012901	86017912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715
ENSMUSG00000026229.18_86014295_86022062_1	chr1	+	646	5	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	21954	44811	21911	-44811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATAATTTCTAACTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	86014294	86022062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997
ENSMUSG00000026229.18_86014437_86044347_1	chr1	+	555	6	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	22096	22526	22053	-22526	internal_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCACGTGCGCTATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	86014436	86044347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296
ENSMUSG00000026229.18_86016598_86046267_1	chr1	+	554	6	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	24257	20606	24214	-20606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGAACTACGTGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	86016597	86046267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231
ENSMUSG00000026229.18_86017853_86055905_1	chr1	+	604	7	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	25512	10968	25469	-10968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGCCGTCTGTGGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	86017852	86055905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857
ENSMUSG00000026229.18_86044293_86058451_1	chr1	+	602	5	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	51952	8422	51909	-8422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTCTTTGGGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	86044292	86058451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358
ENSMUSG00000026229.18_86046230_86061506_1	chr1	+	632	5	ISM	ENSMUSG00000026229.18	ENST00000677259.1	3159	24	53899	5491	53846	-5367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTATCCATCTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	86046229	86061506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86061359
ENSMUSG00000026229.18_86046274_86061433_1	chr1	+	602	6	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	53933	5440	53890	-5440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACGAGTTATGCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	86046273	86061433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359
ENSMUSG00000026229.18_86046277_86061422_1	chr1	+	408	4	ISM	ENSMUSG00000026229.18	ENST00000409643.6	3060	23	53940	5575	53893	-5451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGATAATCCAGCACGAGT	NA	NA	NA	NA	NA	NA	NA	NA	86046276	86061422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86046349_86054177_86054281_86055857_86056028_86061359
ENSMUSG00000026229.18_86054214_86064754_1	chr1	+	547	5	ISM	ENSMUSG00000026229.18	ENST00000677259.1	3159	24	61883	2243	61830	-2119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCACACGGCCCAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	86054213	86064754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86054281_86055857_86056028_86058358_86058452_86061359_86061507_86064684
ENSMUSG00000026229.18_86058357_86066997_1	chr1	+	525	4	ISM	ENSMUSG00000026229.18	ENST00000677180.1	3092	24	66026	0	65973	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATCTCCACATTGACC	NA	NA	NA	NA	NA	NA	NA	NA	86058356	86066997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86058452_86060435_86060523_86061359_86061507_86066801
ENSMUSG00000026229.18_86058357_86066997_2	chr1	+	592	4	ISM	ENSMUSG00000026229.18	ENST00000677259.1	3159	24	66026	0	65973	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATCTCCACATTGACC	NA	NA	NA	NA	NA	NA	NA	NA	86058356	86066997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86058452_86061359_86061507_86064684_86064839_86066801
ENSMUSG00000026234.13_86277872_86278621_1	chr1	-	635	2	ISM	ENSMUSG00000026234.13	ENST00000678364.1	2160	12	8531	-362	8499	362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGTTGAAAAATTCACATA	NA	NA	NA	NA	NA	NA	NA	NA	86278621	86277871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_86278419_86278533
ENSMUSG00000026234.13_86277950_86278674_1	chr1	-	610	2	ISM	ENSMUSG00000026234.13	ENST00000678364.1	2160	12	8478	-284	8446	284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCTATTCCCAGCATA	NA	NA	NA	NA	NA	NA	NA	NA	86278674	86277949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_86278419_86278533
ENSMUSG00000026234.13_86278004_86278721_1	chr1	-	603	2	ISM	ENSMUSG00000026234.13	ENST00000678364.1	2160	12	8431	-230	8399	230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAGAGCACATGGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	86278721	86278003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_86278419_86278533
ENSMUSG00000026234.13_86278218_86287086_1	chr1	-	2326	14	FSM	ENSMUSG00000026234.13	ENST00000678246.1	2344	14	34	-16	34	16	multi-exon	TRUE	canonical	NA	NA	NA	NA	2232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	86287086	86278217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_86278413_86278590_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ENSMUSG00000026234.13_86278286_86280245_1	chr1	-	620	5	ISM	ENSMUSG00000026234.13	ENST00000678364.1	2160	12	6907	52	6875	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTTACCTGTTCAATG	NA	NA	NA	NA	NA	NA	NA	NA	86280245	86278285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231
ENSMUSG00000026234.13_86278286_86280302_1	chr1	-	677	5	ISM	ENSMUSG00000026234.13	ENST00000678364.1	2160	12	6850	52	6818	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTTACCTGTTCAATG	NA	NA	NA	NA	NA	NA	NA	NA	86280302	86278285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231
ENSMUSG00000026234.13_86278395_86280355_1	chr1	-	621	5	ISM	ENSMUSG00000026234.13	ENST00000678364.1	2160	12	6797	161	6765	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGGAGGGGGAGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	86280355	86278394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231
ENSMUSG00000026234.13_86278701_86283824_1	chr1	-	606	6	ISM	ENSMUSG00000026234.13	ENST00000678364.1	2160	12	3328	467	3296	-467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGATGGAGAAATTGACG	NA	NA	NA	NA	NA	NA	NA	NA	86283824	86278700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86282741_86282867_86283773
ENSMUSG00000026234.13_86278743_86283917_1	chr1	-	657	6	ISM	ENSMUSG00000026234.13	ENST00000678364.1	2160	12	3235	509	3203	-509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAATAGTGAGGAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	86283917	86278742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86282741_86282867_86283773
ENSMUSG00000026234.13_86279158_86284142_1	chr1	-	621	6	ISM	ENSMUSG00000026234.13	ENST00000678364.1	2160	12	3010	924	2978	-924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATCATTTGAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	86284142	86279157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_86279216_86279919_86280042_86280231_86280356_86282741_86282867_86283773_86283916_86284092
ENSMUSG00000026234.13_86279987_86284335_1	chr1	-	591	6	ISM	ENSMUSG00000026234.13	ENST00000678364.1	2160	12	2817	1753	2785	-1753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAATAAAATGGAAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	86284335	86279986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_86280042_86280231_86280356_86282741_86282867_86283773_86283916_86284092_86284180_86284277
ENSMUSG00000026234.13_86280022_86284401_1	chr1	-	622	6	ISM	ENSMUSG00000026234.13	ENST00000678364.1	2160	12	2751	1788	2719	-1788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATTTGAAGATGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	86284401	86280021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_86280042_86280231_86280356_86282741_86282867_86283773_86283916_86284092_86284180_86284277
ENSMUSG00000026234.13_86280310_86284729_1	chr1	-	637	6	ISM	ENSMUSG00000026234.13	ENST00000678364.1	2160	12	2423	2076	2391	-2076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAACTCTTGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	86284729	86280309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_86280356_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678
ENSMUSG00000026235.15_77349958_77403526_1	chr1	-	2423	13	ISM	ENSMUSG00000026235.15	ENST00000409854.5	3436	17	88177	-1	88177	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCCTTACCAGAAAGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	77403526	77349957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_77350485_77351378_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187
ENSMUSG00000026235.15_77350268_77483339_1	chr1	-	2424	15	ISM	ENSMUSG00000026235.15	ENST00000409854.5	3436	17	8364	309	8364	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAAAACAAACAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	77483339	77350267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_77350485_77351378_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184
ENSMUSG00000026235.15_77350268_77483383_1	chr1	-	2468	15	ISM	ENSMUSG00000026235.15	ENST00000409854.5	3436	17	8320	309	8320	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAAAACAAACAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	77483383	77350267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_77350485_77351378_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184
ENSMUSG00000026235.15_77350408_77483438_1	chr1	-	2383	15	ISM	ENSMUSG00000026235.15	ENST00000409854.5	3436	17	8265	449	8265	-449	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCAGCAGATGCATGGC	NA	NA	NA	NA	NA	NA	NA	NA	77483438	77350407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_77350485_77351378_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184
ENSMUSG00000026235.15_77351419_77483551_1	chr1	-	2379	14	ISM	ENSMUSG00000026235.15	ENST00000409854.5	3436	17	8152	1460	8152	-1460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGCCAGGAGTAAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	77483551	77351418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184
ENSMUSG00000026235.15_77351479_77483639_1	chr1	-	2407	14	ISM	ENSMUSG00000026235.15	ENST00000409854.5	3436	17	8064	1520	8064	-1520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCGGTATAAGGACAACTT	NA	NA	NA	NA	NA	NA	NA	NA	77483639	77351478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184
ENSMUSG00000026235.15_77354163_77483810_1	chr1	-	2381	13	ISM	ENSMUSG00000026235.15	ENST00000409854.5	3436	17	7893	4204	7893	-4204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGGCAGAAAGAGAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	77483810	77354162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184
ENSMUSG00000026235.15_77357525_77491613_1	chr1	-	2417	14	ISM	ENSMUSG00000026235.15	ENST00000409854.5	3436	17	90	7566	90	-7566	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGGGATATGTCCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	77491613	77357524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
ENSMUSG00000026235.15_77357601_77491716_1	chr1	-	2444	14	ISM	ENSMUSG00000026235.15	ENST00000409854.5	3436	17	-13	7642	9	-7642	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTACCTCAGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	77491716	77357600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
ENSMUSG00000026238.15_86454529_86457707_1	chr1	+	408	5	FSM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	81	727	0	-224	multi-exon	FALSE	canonical	NA	NA	NA	NA	3370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAGAAGACCGAGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	86454528	86457707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457686
ENSMUSG00000026238.15_86454529_86457728_1	chr1	+	429	5	FSM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	81	706	0	-203	multi-exon	FALSE	canonical	NA	NA	NA	NA	3902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTAGACAGCAAAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	86454528	86457728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457686
ENSMUSG00000026238.15_86454529_86457931_1	chr1	+	535	4	FSM	ENSMUSG00000026238.15	ENSMUST00000186255.7	768	4	71	162	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACCAGAACTTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	86454528	86457931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_86454673_86456894_86456967_86457452_86457527_86457686
ENSMUSG00000026238.15_86454659_86457799_1	chr1	+	370	5	FSM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	211	635	130	-132	multi-exon	FALSE	canonical	NA	NA	NA	NA	2590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACGTGGTCACCTTCGA	NA	NA	NA	NA	NA	NA	NA	NA	86454658	86457799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457686
ENSMUSG00000026238.15_86456914_86457799_1	chr1	+	333	4	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	2385	-132	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACGTGGTCACCTTCGA	NA	NA	NA	NA	NA	NA	NA	NA	86456913	86457799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_86456967_86457177_86457279_86457460_86457527_86457686
ENSMUSG00000026238.15_86456921_86457800_1	chr1	+	325	4	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	2392	-131	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1098	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTGGTCACCTTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	86456920	86457800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_86456967_86457177_86457269_86457452_86457527_86457686
ENSMUSG00000026238.15_86456928_86457788_1	chr1	+	311	4	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	2399	-143	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCTCAGAATTTAAACGTG	NA	NA	NA	NA	NA	NA	NA	NA	86456927	86457788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_86456967_86457177_86457279_86457457_86457527_86457686
ENSMUSG00000026238.15_86457221_86457931_1	chr1	+	367	3	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	2692	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACCAGAACTTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	86457220	86457931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_86457269_86457452_86457527_86457686
ENSMUSG00000026238.15_86457224_86457931_1	chr1	+	369	3	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	2695	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACCAGAACTTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	86457223	86457931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_86457279_86457457_86457527_86457686
ENSMUSG00000026238.15_86457224_86457931_2	chr1	+	370	3	ISM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	2776	503	2695	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACCAGAACTTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	86457223	86457931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86457275_86457452_86457527_86457686
ENSMUSG00000026238.15_86457261_86457933_1	chr1	+	334	3	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	2732	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCAGAACTTCCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	86457260	86457933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_86457279_86457457_86457527_86457686
ENSMUSG00000026238.15_86457263_86457948_1	chr1	+	348	3	ISM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	2815	486	2734	17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCCCTACTTTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	86457262	86457948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86457275_86457452_86457527_86457686
ENSMUSG00000026238.15_86457510_86458093_1	chr1	+	424	2	ISM	ENSMUSG00000026238.15	ENSMUST00000186255.7	768	4	3052	0	2981	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTACTTCAGACTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	86457509	86458093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86457527_86457686
ENSMUSG00000026239.15_86471242_86474504_1	chr1	-	296	3	ISM	ENSMUSG00000026239.15	ENSMUST00000027444.15	1159	5	35765	526	35765	-526	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTTTCTATGTTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	86474504	86471241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_86471306_86473423_86473530_86474378
ENSMUSG00000026239.15_86473498_86510058_1	chr1	-	284	4	FSM	ENSMUSG00000026239.15	ENSMUST00000146220.2	879	4	211	384	211	-384	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCACAAACACCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	86510058	86473497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_86473530_86474378_86474505_86475250_86475340_86510021
ENSMUSG00000026240.13_86510626_86533017_1	chr1	+	1083	7	FSM	ENSMUSG00000026240.13	ENST00000410024.5	1067	7	-16	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGCAGTGAGTTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	86510625	86533017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_86510819_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ENSMUSG00000026240.13_86510626_86533017_2	chr1	+	829	5	FSM	ENSMUSG00000026240.13	ENST00000409091.5	784	5	-16	-29	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGCAGTGAGTTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	86510625	86533017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_86510819_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ENSMUSG00000026240.13_86514822_86534048_1	chr1	+	2057	7	FSM	ENSMUSG00000026240.13	ENSMUST00000027446.11	2231	7	0	174	0	-174	multi-exon	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTAGGTGTGGAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	86514821	86534048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ENSMUSG00000026240.13_86514822_86534539_1	chr1	+	2472	6	FSM	ENSMUSG00000026240.13	ENST00000620578.4	2492	6	20	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCATTCCATATCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	86514821	86534539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_86514958_86516885_86517064_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ENSMUSG00000026240.13_86516880_86534247_1	chr1	+	2126	6	ISM	ENSMUSG00000026240.13	ENSMUST00000027446.11	2231	7	2058	-25	1	25	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAGATTTGACATATGCG	NA	NA	NA	NA	NA	NA	NA	NA	86516879	86534247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ENSMUSG00000026240.13_86516926_86533442_1	chr1	+	1311	6	FSM	ENSMUSG00000026240.13	ENST00000373608.7	2455	6	47	1097	47	425	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGGCCATGGAGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	86516925	86533442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528947_86532779
ENSMUSG00000026240.13_86516978_86533495_1	chr1	+	1312	6	FSM	ENSMUSG00000026240.13	ENST00000373608.7	2455	6	99	1044	99	478	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGCCTCTTAAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	86516977	86533495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528947_86532779
ENSMUSG00000026240.13_86517033_86533541_1	chr1	+	1303	6	FSM	ENSMUSG00000026240.13	ENST00000373608.7	2455	6	154	998	154	524	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGCTGACTAACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	86517032	86533541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528947_86532779
ENSMUSG00000026240.13_86526870_86533886_1	chr1	+	1307	3	ISM	ENSMUSG00000026240.13	ENST00000373608.7	2455	6	9991	653	9991	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGACTAGACTTTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	86526869	86533886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86526928_86528804_86528947_86532779
ENSMUSG00000026240.13_86528804_86534048_1	chr1	+	1412	2	ISM	ENSMUSG00000026240.13	ENST00000373608.7	2455	6	11925	491	11925	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTAGGTGTGGAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	86528803	86534048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86528947_86532779
ENSMUSG00000026245.17_78401722_78439006_1	chr1	-	692	5	ISM	ENSMUSG00000026245.17	ENSMUST00000068333.14	1951	17	26528	17	26490	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGCGTAGCTGCATTA	NA	NA	NA	NA	NA	NA	NA	NA	78439006	78401721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942
ENSMUSG00000026245.17_78401905_78439558_1	chr1	-	613	6	ISM	ENSMUSG00000026245.17	ENSMUST00000068333.14	1951	17	25976	200	25938	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATGTTATCACCAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	78439558	78401904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471
ENSMUSG00000026245.17_78420270_78439679_1	chr1	-	658	5	ISM	ENSMUSG00000026245.17	ENSMUST00000068333.14	1951	17	25855	18565	25817	-18565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATACCAGGGTTGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	78439679	78420269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471
ENSMUSG00000026248.10_79753833_79758924_1	chr1	+	1088	4	FSM	ENSMUSG00000026248.10	ENSMUST00000027464.9	1424	4	98	238	98	-238	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGAGCAGTGTCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	79753832	79758924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_79754029_79755574_79756044_79757204_79757384_79758680
ENSMUSG00000026248.10_79753833_79758958_1	chr1	+	1122	4	FSM	ENSMUSG00000026248.10	ENSMUST00000027464.9	1424	4	98	204	98	-204	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAACTAGACAAGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	79753832	79758958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_79754029_79755574_79756044_79757204_79757384_79758680
ENSMUSG00000026248.10_79753833_79759036_1	chr1	+	1200	4	FSM	ENSMUSG00000026248.10	ENSMUST00000027464.9	1424	4	98	126	98	-126	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTTTATTACTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	79753832	79759036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_79754029_79755574_79756044_79757204_79757384_79758680
ENSMUSG00000026248.10_79753944_79759162_1	chr1	+	1215	4	FSM	ENSMUSG00000026248.10	ENSMUST00000027464.9	1424	4	209	0	209	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTTTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	79753943	79759162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_79754029_79755574_79756044_79757204_79757384_79758680
ENSMUSG00000026249.11_79771914_79794672_1	chr1	-	1743	7	ISM	ENSMUSG00000026249.11	ENSMUST00000027467.11	2210	9	41741	0	41741	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTGGTGGTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	79794672	79771913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_79772760_79774542_79774627_79777184_79777272_79779172_79779274_79780563_79780763_79788270_79788469_79794444
ENSMUSG00000026249.11_79772184_79799274_1	chr1	-	1754	8	ISM	ENSMUSG00000026249.11	ENSMUST00000027467.11	2210	9	37139	270	37139	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCTCACTTCCACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	79799274	79772183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_79772760_79774542_79774627_79777184_79777272_79779172_79779274_79780563_79780763_79788270_79788469_79794444_79794673_79798993
ENSMUSG00000026249.11_79772349_79836352_1	chr1	-	1714	9	FSM	ENSMUSG00000026249.11	ENSMUST00000027467.11	2210	9	61	435	61	-435	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTGTCAAGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	79836352	79772348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_79772760_79774542_79774627_79777184_79777272_79779172_79779274_79780563_79780763_79788270_79788469_79794444_79794673_79798993_79799275_79836227
ENSMUSG00000026249.11_79772469_79836413_1	chr1	-	1655	9	FSM	ENSMUSG00000026249.11	ENSMUST00000027467.11	2210	9	0	555	0	-555	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGATGCTGGATGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	79836413	79772468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_79772760_79774542_79774627_79777184_79777272_79779172_79779274_79780563_79780763_79788270_79788469_79794444_79794673_79798993_79799275_79836227
ENSMUSG00000026251.14_87118791_87120286_1	chr1	+	295	4	ISM	ENSMUSG00000026251.14	ENSMUST00000186373.2	2949	11	225	7505	225	-7505	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTTCCGCTCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	87118790	87120286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87118852_87119241_87119287_87119935_87120046_87120207
ENSMUSG00000026251.14_87120274_87122576_1	chr1	+	255	3	ISM	ENSMUSG00000026251.14	ENSMUST00000186373.2	2949	11	1708	5215	1708	-5215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCCGATGGACAGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	87120273	87122576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87120364_87120567_87120678_87122521
ENSMUSG00000026251.14_87120332_87122669_1	chr1	+	290	3	ISM	ENSMUSG00000026251.14	ENSMUST00000186373.2	2949	11	1766	5122	1766	-5122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGTGCTCATCTCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	87120331	87122669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87120364_87120567_87120678_87122521
ENSMUSG00000026251.14_87125099_87126361_1	chr1	+	290	3	ISM	ENSMUSG00000026251.14	ENSMUST00000186373.2	2949	11	6533	1430	6533	-1430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGTCATGGTGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	87125098	87126361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87125210_87125296_87125416_87126301
ENSMUSG00000026253.15_87133796_87139076_1	chr1	+	1372	11	ISM	ENSMUSG00000026253.15	ENSMUST00000027470.14	2780	12	263	1340	263	-1340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGCTTCCTAGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	87133795	87139076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87133937_87134189_87134235_87134371_87134482_87135108_87135265_87135929_87136028_87136736_87136938_87137148_87137264_87137485_87137601_87138245_87138463_87138624_87138759_87139036
ENSMUSG00000026253.15_87134459_87139253_1	chr1	+	1276	9	ISM	ENSMUSG00000026253.15	ENSMUST00000027470.14	2780	12	926	1163	926	-1163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTTTGTAGAGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	87134458	87139253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87134482_87135108_87135265_87135929_87136028_87136736_87136938_87137148_87137264_87137485_87137601_87138245_87138463_87138624_87138759_87139036
ENSMUSG00000026253.15_87135194_87139379_1	chr1	+	1294	8	ISM	ENSMUSG00000026253.15	ENSMUST00000027470.14	2780	12	1661	1037	1661	-1037	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGTCACATGACTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	87135193	87139379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87135265_87135929_87136028_87136736_87136938_87137148_87137264_87137485_87137601_87138245_87138463_87138624_87138759_87139036
ENSMUSG00000026253.15_87136854_87139645_1	chr1	+	1274	6	ISM	ENSMUSG00000026253.15	ENSMUST00000027470.14	2780	12	3321	771	3321	-771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGGAGTTATAGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	87136853	87139645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87136938_87137148_87137264_87137485_87137601_87138245_87138463_87138624_87138759_87139036
ENSMUSG00000026253.15_87137162_87139787_1	chr1	+	1319	5	ISM	ENSMUSG00000026253.15	ENSMUST00000027470.14	2780	12	3629	629	3629	-629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGATGTGGGGAACTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	87137161	87139787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87137264_87137485_87137601_87138245_87138463_87138624_87138759_87139036
ENSMUSG00000026253.15_87137228_87139828_1	chr1	+	1294	5	ISM	ENSMUSG00000026253.15	ENSMUST00000027470.14	2780	12	3695	588	3695	-588	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGTGGTGGGGCCTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	87137227	87139828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87137264_87137485_87137601_87138245_87138463_87138624_87138759_87139036
ENSMUSG00000026253.15_87137581_87139947_1	chr1	+	1282	4	ISM	ENSMUSG00000026253.15	ENSMUST00000027470.14	2780	12	4048	469	4048	-469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTGGTTAGGAACACTG	NA	NA	NA	NA	NA	NA	NA	NA	87137580	87139947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87137601_87138245_87138463_87138624_87138759_87139036
ENSMUSG00000026253.15_87138646_87140232_1	chr1	+	1309	2	ISM	ENSMUSG00000026253.15	ENSMUST00000027470.14	2780	12	5113	184	5113	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTTCTAGATGCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	87138645	87140232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87138759_87139036
ENSMUSG00000026254.18_87141661_87155585_1	chr1	+	789	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113233.8	1807	7	25	993	0	-169	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCATGACCCTCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	87141660	87155585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ENSMUSG00000026254.18_87141701_87155786_1	chr1	+	815	6	FSM	ENSMUSG00000026254.18	ENST00000409322.5	792	6	9	-32	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCATGCTCTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	87141700	87155786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_87141742_87147302_87147418_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ENSMUSG00000026254.18_87147381_87154167_1	chr1	+	644	4	ISM	ENSMUSG00000026254.18	ENST00000409167.7	1345	5	5695	567	5373	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTTTCCTACCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	87147380	87154167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87147418_87152074_87152180_87153571_87153725_87153818
ENSMUSG00000026254.18_87152101_87155922_1	chr1	+	769	4	ISM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	10093	-136	10093	136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTAGTCACATGGTACT	NA	NA	NA	NA	NA	NA	NA	NA	87152100	87155922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87152180_87153571_87153725_87153818_87153956_87155522
ENSMUSG00000026254.18_87152104_87154322_1	chr1	+	733	3	ISM	ENSMUSG00000026254.18	ENSMUST00000113230.8	1569	6	10443	0	10096	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTGACCCCACCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	87152103	87154322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87152180_87153571_87153725_87153818
ENSMUSG00000026254.18_87153608_87156028_1	chr1	+	760	3	ISM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	11600	-242	11600	242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCATCCAGTTAGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	87153607	87156028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87153725_87153818_87153956_87155522
ENSMUSG00000026254.18_87153662_87156087_1	chr1	+	765	3	ISM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	11654	-301	11654	301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTCTCTTAAGGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	87153661	87156087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87153725_87153818_87153956_87155522
ENSMUSG00000026254.18_87153863_87156195_1	chr1	+	766	2	ISM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	11855	-409	11855	-383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGGCCGCACATACA	NA	NA	NA	NA	NA	NA	NA	NA	87153862	87156195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87153956_87155522
ENSMUSG00000026254.18_87153912_87156249_1	chr1	+	771	2	ISM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	11904	-463	11904	-329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGCCAAAGCTGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	87153911	87156249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87153956_87155522
ENSMUSG00000026255.16_87192085_87238123_1	chr1	+	1416	4	FSM	ENSMUSG00000026255.16	ENSMUST00000027472.7	1854	4	0	438	0	-438	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCCTAAGTTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	87192084	87238123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_87192477_87217189_87217338_87225350_87225486_87237382
ENSMUSG00000026255.16_87192203_87238232_1	chr1	+	1407	4	FSM	ENSMUSG00000026255.16	ENSMUST00000027472.7	1854	4	118	329	118	-329	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTCAAGTGACATCCA	NA	NA	NA	NA	NA	NA	NA	NA	87192202	87238232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_87192477_87217189_87217338_87225350_87225486_87237382
ENSMUSG00000026255.16_87192314_87238288_1	chr1	+	1352	4	FSM	ENSMUSG00000026255.16	ENSMUST00000027472.7	1854	4	229	273	229	-273	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGTTCCAGAGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	87192313	87238288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_87192477_87217189_87217338_87225350_87225486_87237382
ENSMUSG00000026255.16_87217190_87238558_1	chr1	+	1459	3	ISM	ENSMUSG00000026255.16	ENSMUST00000027472.7	1854	4	25105	3	25105	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACCAGTGTGCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	87217189	87238558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87217338_87225350_87225486_87237382
ENSMUSG00000026259.15_87404556_87412395_1	chr1	-	1581	7	ISM	ENSMUSG00000026259.15	ENSMUST00000027477.15	2746	13	25689	0	25689	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGTAGAGACCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	87412395	87404555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87405467_87406824_87406930_87407558_87407639_87408308_87408465_87408837_87409002_87410344_87410435_87412320
ENSMUSG00000026259.15_87404809_87415547_1	chr1	-	1485	9	ISM	ENSMUSG00000026259.15	ENSMUST00000027477.15	2746	13	22537	253	22537	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCGTCCCCGTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	87415547	87404808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87405467_87406824_87406930_87407558_87407639_87408308_87408465_87408837_87409002_87410344_87410435_87412320_87412396_87413877_87414008_87415520
ENSMUSG00000026259.15_87404999_87417389_1	chr1	-	1505	10	ISM	ENSMUSG00000026259.15	ENSMUST00000027477.15	2746	13	20695	443	20695	-443	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGACCTTCCGGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	87417389	87404998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87405467_87406824_87406930_87407558_87407639_87408308_87408465_87408837_87409002_87410344_87410435_87412320_87412396_87413877_87414008_87415520_87415674_87417305
ENSMUSG00000026259.15_87405181_87431116_1	chr1	-	1529	11	ISM	ENSMUSG00000026259.15	ENSMUST00000027477.15	2746	13	6968	625	6968	-625	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTCAGTGCCTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	87431116	87405180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87405467_87406824_87406930_87407558_87407639_87408308_87408465_87408837_87409002_87410344_87410435_87412320_87412396_87413877_87414008_87415520_87415674_87417305_87417467_87430987
ENSMUSG00000026259.15_87405341_87431250_1	chr1	-	1503	11	ISM	ENSMUSG00000026259.15	ENSMUST00000027477.15	2746	13	6834	785	6834	-785	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGACCCTCAGCGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87431250	87405340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87405467_87406824_87406930_87407558_87407639_87408308_87408465_87408837_87409002_87410344_87410435_87412320_87412396_87413877_87414008_87415520_87415674_87417305_87417467_87430987
ENSMUSG00000026259.15_87406870_87437069_1	chr1	-	1480	11	ISM	ENSMUSG00000026259.15	ENSMUST00000027477.15	2746	13	1015	2314	1015	-2314	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTGGCAGATATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	87437069	87406869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87406930_87407558_87407639_87408308_87408465_87408837_87409002_87410344_87410435_87412320_87412396_87413877_87414008_87415520_87415674_87417305_87417467_87430987_87431296_87436966
ENSMUSG00000026259.15_87407595_87437880_1	chr1	-	1490	11	ISM	ENSMUSG00000026259.15	ENSMUST00000027477.15	2746	13	204	3039	204	-3039	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCAAGTTTGTATCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	87437880	87407594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87407639_87408308_87408465_87408837_87409002_87410344_87410435_87412320_87412396_87413877_87414008_87415520_87415674_87417305_87417467_87430987_87431296_87436966_87437110_87437814
ENSMUSG00000026259.15_87408384_87438084_1	chr1	-	1575	10	ISM	ENSMUSG00000026259.15	ENSMUST00000027477.15	2746	13	0	3828	0	-3828	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGTTCATCCTGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	87438084	87408383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_87408465_87408837_87409002_87410344_87410435_87412320_87412396_87413877_87414008_87415520_87415674_87417305_87417467_87430987_87431296_87436966_87437110_87437814
ENSMUSG00000026260.13_92366732_92397800_1	chr1	-	1653	8	ISM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	3782	0	3	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCTGGTAGCACTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	92397800	92366731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584
ENSMUSG00000026260.13_92366732_92397803_1	chr1	-	1650	8	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCTGGTAGCACTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	92397803	92366731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395184_92397584
ENSMUSG00000026260.13_92367001_92401469_1	chr1	-	1638	10	FSM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	113	269	113	-269	multi-exon	FALSE	canonical	NA	NA	NA	NA	2418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTATCTCTGAAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	92401469	92367000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ENSMUSG00000026260.13_92367138_92401582_1	chr1	-	1614	10	FSM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	0	406	0	-406	multi-exon	FALSE	canonical	NA	NA	NA	NA	1617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTGCACTTTGGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	92401582	92367137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ENSMUSG00000026260.13_92379775_92395193_1	chr1	-	402	5	ISM	ENSMUSG00000026260.13	ENST00000678914.1	729	7	2610	12215	2610	-12215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTCATCAGGGTAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	92395193	92379774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92395079
ENSMUSG00000026260.13_92388134_92397673_1	chr1	-	388	5	ISM	ENSMUSG00000026260.13	ENST00000678914.1	729	7	130	20574	130	-20574	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGACTGGACCTTTCACTA	NA	NA	NA	NA	NA	NA	NA	NA	92397673	92388133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_92388188_92390012_92390068_92390799_92390880_92395079_92395190_92397584
ENSMUSG00000026269.15_92839086_92844151_1	chr1	+	488	4	ISM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	581	4412	581	-4412	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCAGCAGAGCGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	92839085	92844151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076
ENSMUSG00000026269.15_92844527_92846613_1	chr1	+	497	5	ISM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	6022	1950	6022	-1950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAATGCCACAGGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	92844526	92846613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92844669_92844868_92844983_92845355_92845469_92845739_92845849_92846594
ENSMUSG00000026269.15_92845389_92846990_1	chr1	+	505	4	ISM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	6884	1573	6884	-1573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCGCAATGACTACTATC	NA	NA	NA	NA	NA	NA	NA	NA	92845388	92846990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92845469_92845739_92845849_92846594_92846826_92846905
ENSMUSG00000026269.15_92845779_92847318_1	chr1	+	479	4	ISM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	7274	1245	7274	-1245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCACTGGTGCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	92845778	92847318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92845849_92846594_92846826_92846905_92847049_92847283
ENSMUSG00000026270.12_92872967_92875312_1	chr1	+	316	3	ISM	ENSMUSG00000026270.12	ENST00000404753.7	2212	10	7303	343	7303	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCCAGGTGCATCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	92872966	92875312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92873001_92874495_92874696_92875230
ENSMUSG00000026273.14_93228927_93232525_1	chr1	-	972	3	ISM	ENSMUSG00000026273.14	ENSMUST00000027492.14	1366	4	1112	0	1060	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGGAGTCTTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	93232525	93228926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93229518_93230439_93230625_93232329
ENSMUSG00000026273.14_93229271_93233613_1	chr1	-	998	4	FSM	ENSMUSG00000026273.14	ENSMUST00000027492.14	1366	4	24	344	24	-344	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTTGGATCAAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	93233613	93229270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_93229518_93230439_93230625_93232329_93232829_93233546
ENSMUSG00000026274.12_93240520_93249146_1	chr1	-	1614	7	ISM	ENSMUSG00000026274.12	ENST00000358649.8	3471	14	14419	2	14419	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAGCATGAGTGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	93249146	93240519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93240652_93242002_93242203_93244485_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496
ENSMUSG00000026274.12_93240567_93249204_1	chr1	-	1625	7	ISM	ENSMUSG00000026274.12	ENST00000358649.8	3471	14	14361	49	14361	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGACCATGGAGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	93249204	93240566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93240652_93242002_93242203_93244485_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496
ENSMUSG00000026274.12_93240607_93249269_1	chr1	-	1650	7	ISM	ENSMUSG00000026274.12	ENST00000358649.8	3471	14	14296	89	14296	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACGCTCATCTTCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	93249269	93240606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93240652_93242002_93242203_93244485_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496
ENSMUSG00000026274.12_93242122_93249398_1	chr1	-	1615	6	ISM	ENSMUSG00000026274.12	ENST00000358649.8	3471	14	14167	1604	14167	-1604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTCACAATTAAGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	93249398	93242121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93242203_93244485_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496
ENSMUSG00000026274.12_93242172_93249454_1	chr1	-	1621	6	ISM	ENSMUSG00000026274.12	ENST00000358649.8	3471	14	14111	1654	14111	-1654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCATCATCCATAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	93249454	93242171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93242203_93244485_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496
ENSMUSG00000026274.12_93244500_93253179_1	chr1	-	2106	7	ISM	ENSMUSG00000026274.12	ENST00000403638.7	3123	12	10386	0	10386	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCGGCGCTCTGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	93253179	93244499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249737_93251923_93252078_93253085
ENSMUSG00000026274.12_93244568_93253256_1	chr1	-	2115	7	ISM	ENSMUSG00000026274.12	ENST00000403638.7	3123	12	10309	68	10309	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	957	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTCATTGACCACCATC	NA	NA	NA	NA	NA	NA	NA	NA	93253256	93244567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249737_93251923_93252078_93253085
ENSMUSG00000026274.12_93244745_93254977_1	chr1	-	2077	7	ISM	ENSMUSG00000026274.12	ENST00000403638.7	3123	12	8588	245	8588	-245	internal_fragment	FALSE	canonical	NA	NA	NA	NA	949	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAGATGGTGATTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	93254977	93244744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93244869_93247681_93247850_93248215_93248398_93248496_93249737_93251923_93252078_93253085_93253255_93254937
ENSMUSG00000026274.12_93244807_93255016_1	chr1	-	2054	7	ISM	ENSMUSG00000026274.12	ENST00000403638.7	3123	12	8549	307	8549	-307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGAAGAGTTACTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	93255016	93244806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93244869_93247681_93247850_93248215_93248398_93248496_93249737_93251923_93252078_93253085_93253255_93254937
ENSMUSG00000026274.12_93244848_93255088_1	chr1	-	2085	7	ISM	ENSMUSG00000026274.12	ENST00000403638.7	3123	12	8477	348	8477	-348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGAAGGTTTTAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	93255088	93244847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93244869_93247681_93247850_93248215_93248398_93248496_93249737_93251923_93252078_93253085_93253255_93254937
ENSMUSG00000026274.12_93247818_93258510_1	chr1	-	2072	7	ISM	ENSMUSG00000026274.12	ENST00000403638.7	3123	12	5055	3318	5055	-3318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAACACCTGCAGAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	93258510	93247817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93247850_93248215_93248398_93248496_93249737_93251923_93252078_93253085_93253255_93254937_93255199_93258476
ENSMUSG00000026274.12_93248255_93259316_1	chr1	-	2138	7	ISM	ENSMUSG00000026274.12	ENST00000403638.7	3123	12	4249	3755	4249	-3755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCATGCCTGAGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	93259316	93248254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93248398_93248496_93249737_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280
ENSMUSG00000026274.12_93248345_93259335_1	chr1	-	2067	7	ISM	ENSMUSG00000026274.12	ENST00000403638.7	3123	12	4230	3845	4230	-3845	internal_fragment	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGGCTGGTGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	93259335	93248344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93248398_93248496_93249737_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280
ENSMUSG00000026274.12_93248648_93262396_1	chr1	-	2081	7	ISM	ENSMUSG00000026274.12	ENST00000403638.7	3123	12	1169	4148	1169	-4148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAACGATATGTGCCTATC	NA	NA	NA	NA	NA	NA	NA	NA	93262396	93248647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93249737_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264
ENSMUSG00000026274.12_93248769_93263386_1	chr1	-	2054	8	ISM	ENSMUSG00000026274.12	ENST00000403638.7	3123	12	179	4269	179	-4269	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGATGGGAGCAGGACATG	NA	NA	NA	NA	NA	NA	NA	NA	93263386	93248768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93249737_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331
ENSMUSG00000026274.12_93248810_93263448_1	chr1	-	2075	8	ISM	ENSMUSG00000026274.12	ENST00000403638.7	3123	12	117	4310	117	-4310	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGACCTATTTTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	93263448	93248809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93249737_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331
ENSMUSG00000026274.12_93248872_93263487_1	chr1	-	2052	8	ISM	ENSMUSG00000026274.12	ENST00000403638.7	3123	12	78	4372	78	-4372	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGGTATTCTGCATAGG	NA	NA	NA	NA	NA	NA	NA	NA	93263487	93248871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93249737_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331
ENSMUSG00000026275.14_93270802_93280304_1	chr1	+	1083	6	ISM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	226	20907	176	-5278	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCTTCTTGGTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	93270801	93280304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238
ENSMUSG00000026275.14_93270865_93280371_1	chr1	+	1087	6	ISM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	289	20840	239	-5211	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGGAGCTGGGGTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	93270864	93280371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238
ENSMUSG00000026275.14_93271006_93282140_1	chr1	+	1066	7	ISM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	430	19071	380	-3442	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACCTGACAGTCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	93271005	93282140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050
ENSMUSG00000026275.14_93278681_93282158_1	chr1	+	458	4	ISM	ENSMUSG00000026275.14	ENST00000402734.5	735	7	8055	3424	8055	-3424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGCAGGTACTGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	93278680	93282158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93278737_93279227_93279359_93280238_93280402_93282050
ENSMUSG00000026275.14_93280333_93293298_1	chr1	+	1065	5	ISM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	9757	7913	9707	7716	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCTGAGCACAGCACACTG	NA	NA	NA	NA	NA	NA	NA	NA	93280332	93293298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
ENSMUSG00000026275.14_93288457_93293625_1	chr1	+	1092	2	ISM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	17881	7586	17831	-7586	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTAGTTCTACGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	93288456	93293625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93288535_93292611
ENSMUSG00000026276.21_93423312_93437676_1	chr1	+	3205	10	ISM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	16626	306	16626	-306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAATTTACTAATTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	93423311	93437676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUSG00000026276.21_93423328_93437672_1	chr1	+	3185	10	ISM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	16642	310	16642	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2022	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGGTAAATTTACTAATT	NA	NA	NA	NA	NA	NA	NA	NA	93423327	93437672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUSG00000026276.21_93425104_93437777_1	chr1	+	3189	9	ISM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	18418	205	18418	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2820	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGAATTAGGAAAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	93425103	93437777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUSG00000026276.21_93426733_93437982_1	chr1	+	3307	8	NNC	ENSMUSG00000026276.21	novel	3779	13	NA	NA	20047	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGATTTTTACGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	93426732	93437982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433270_93433324_93434684_93434805_93435434
ENSMUSG00000026276.21_93426771_93437982_1	chr1	+	3274	8	ISM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	20085	0	20085	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGATTTTTACGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	93426770	93437982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUSG00000026277.15_93548508_93552346_1	chr1	-	1950	3	ISM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	11098	1035	11098	-1035	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATGCACACATGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	93552346	93548507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93550249_93551117_93551255_93552274
ENSMUSG00000026277.15_93548622_93552773_1	chr1	-	1854	4	ISM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	10671	1149	10671	-1149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACGTGGCAAAACTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	93552773	93548621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755
ENSMUSG00000026277.15_93548777_93553245_1	chr1	-	1859	5	ISM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	10199	1304	10199	-1304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGAGATGGATTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	93553245	93548776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182
ENSMUSG00000026277.15_93548819_93553304_1	chr1	-	1876	5	ISM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	10140	1346	10140	-1346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCATGATGTTCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	93553304	93548818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182
ENSMUSG00000026277.15_93548937_93553585_1	chr1	-	1865	6	ISM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	9859	1464	9859	-1464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCAAACCAGTCGGCATA	NA	NA	NA	NA	NA	NA	NA	NA	93553585	93548936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502
ENSMUSG00000026277.15_93548996_93553630_1	chr1	-	1851	6	ISM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	9814	1523	9814	-1523	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGGTCTCCCTGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	93553630	93548995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502
ENSMUSG00000026277.15_93549129_93553835_1	chr1	-	1839	7	ISM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	9609	1656	9609	-1656	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGGATGATGCTTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	93553835	93549128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772
ENSMUSG00000026277.15_93549241_93554767_1	chr1	-	1843	8	ISM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	8677	1768	8677	-1768	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCATTGTTTCTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	93554767	93549240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746
ENSMUSG00000026277.15_93549374_93555432_1	chr1	-	1855	9	ISM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	8012	1901	8012	-1901	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGGCTACAGGTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	93555432	93549373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375
ENSMUSG00000026277.15_93549624_93563201_1	chr1	-	2018	11	ISM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	243	2151	243	-2151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGTACAGAGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	93563201	93549623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019
ENSMUSG00000026277.15_93549747_93563351_1	chr1	-	1882	12	FSM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	93	2274	93	-2274	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGTTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	93563351	93549746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
ENSMUSG00000026277.15_93549799_93563369_1	chr1	-	1848	12	FSM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	75	2326	75	-2326	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTTCAGGTACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	93563369	93549798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
ENSMUSG00000026277.15_93549849_93563444_1	chr1	-	1873	12	FSM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	0	2376	0	-2376	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTGAGGGCTCATAGG	NA	NA	NA	NA	NA	NA	NA	NA	93563444	93549848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
ENSMUSG00000026278.15_93613424_93623177_1	chr1	+	1117	5	FSM	ENSMUSG00000026278.15	ENSMUST00000027499.13	1468	5	42	309	0	245	multi-exon	FALSE	canonical	NA	NA	NA	NA	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCCCCACCCAAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	93613423	93623177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_93613577_93614139_93614392_93616878_93617008_93621781_93621946_93622758
ENSMUSG00000026278.15_93614183_93623312_1	chr1	+	1056	4	ISM	ENSMUSG00000026278.15	ENSMUST00000027499.13	1468	5	801	174	759	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTTAGGCTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	93614182	93623312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93614392_93616878_93617008_93621781_93621946_93622758
ENSMUSG00000026278.15_93616930_93623486_1	chr1	+	970	3	ISM	ENSMUSG00000026278.15	ENSMUST00000027499.13	1468	5	3548	0	3506	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGACTCTACTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	93616929	93623486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93617008_93621781_93621946_93622758
ENSMUSG00000026279.15_93632804_93644463_1	chr1	-	788	3	ISM	ENSMUSG00000026279.15	ENSMUST00000189728.7	713	5	15185	-305	15185	305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACTGGCATCAGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	93644463	93632803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93633378_93642619_93642724_93644353
ENSMUSG00000026279.15_93632939_93653029_1	chr1	-	804	4	ISM	ENSMUSG00000026279.15	ENSMUST00000189728.7	713	5	6619	-170	6619	170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAAGACTATACTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	93653029	93632938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878
ENSMUSG00000026279.15_93677980_93682251_1	chr1	-	801	2	ISM	ENSMUSG00000026279.15	ENSMUST00000190116.7	5558	6	251	48323	251	-44871	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCCAGAGTCCCCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	93682251	93677979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93678708_93682178
ENSMUSG00000026279.15_93678154_93682420_1	chr1	-	796	2	ISM	ENSMUSG00000026279.15	ENSMUST00000190116.7	5558	6	82	48497	82	-45045	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTATGGACGACTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	93682420	93678153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93678708_93682178
ENSMUSG00000026280.18_93702893_93708501_1	chr1	+	279	4	ISM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	20266	9831	20266	-9831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACTGTAATGGGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	93702892	93708501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93702957_93703349_93703423_93706006_93706087_93708439
ENSMUSG00000026281.16_93722547_93728605_1	chr1	-	272	3	ISM	ENSMUSG00000026281.16	ENSMUST00000027503.14	1003	5	1051	2249	1023	-2101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAGTTTGGCCTTGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	93728605	93722546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93722646_93726101_93726193_93728523
ENSMUSG00000026281.16_93722625_93729457_1	chr1	-	259	4	ISM	ENSMUSG00000026281.16	ENSMUST00000027503.14	1003	5	199	2327	171	-2179	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAACCGGACGTGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	93729457	93722624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93722646_93726101_93726193_93728523_93728633_93729419
ENSMUSG00000026283.14_93744360_93747731_1	chr1	+	1791	2	ISM	ENSMUSG00000026283.14	ENSMUST00000190476.2	918	8	12293	-1627	12293	1627	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAGGTGTGCACCAAT	NA	NA	NA	NA	NA	NA	NA	NA	93744359	93747731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93744422_93746002
ENSMUSG00000026289.16_87683815_87719605_1	chr1	+	2016	14	FSM	ENSMUSG00000026289.16	ENST00000347464.9	2656	14	94	546	7	-539	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGTGTGTGAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	87683814	87719605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_87684037_87687772_87687867_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ENSMUSG00000026289.16_87683942_87719672_1	chr1	+	1956	14	FSM	ENSMUSG00000026289.16	ENST00000347464.9	2656	14	221	479	134	-472	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACACATCTTTACCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	87683941	87719672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_87684037_87687772_87687867_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ENSMUSG00000026289.16_87687789_87719801_1	chr1	+	1974	13	ISM	ENSMUSG00000026289.16	ENST00000347464.9	2656	14	4068	350	3981	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCTGGTGATGATGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	87687788	87719801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87687867_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ENSMUSG00000026289.16_87703525_87720045_1	chr1	+	1941	10	ISM	ENSMUSG00000026289.16	ENSMUST00000113190.3	3102	19	19717	102	19717	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGATTCGCTGGCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	87703524	87720045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ENSMUSG00000026305.16_90926501_91056640_1	chr1	+	2022	13	NNC	ENSMUSG00000026305.16	novel	2050	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAAAAATGAAACGTTA	NA	NA	NA	NA	NA	NA	NA	NA	90926500	91056640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_90926616_90996290_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
ENSMUSG00000026305.16_90926501_91056640_2	chr1	+	2020	13	NNC	ENSMUSG00000026305.16	novel	2050	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAAAAATGAAACGTTA	NA	NA	NA	NA	NA	NA	NA	NA	90926500	91056640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_90926616_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053370_91053468_91055807
ENSMUSG00000026305.16_90926501_91056640_4	chr1	+	2022	13	NNC	ENSMUSG00000026305.16	novel	2050	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAAAAATGAAACGTTA	NA	NA	NA	NA	NA	NA	NA	NA	90926500	91056640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_90926616_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050149_91050262_91050799_91050880_91053362_91053468_91055807
ENSMUSG00000026305.16_90981308_91039908_1	chr1	+	682	7	ISM	ENSMUSG00000026305.16	ENSMUST00000097649.10	3645	8	132	5129	0	-5129	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCAACGGAGAGACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	90981307	91039908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877
ENSMUSG00000026305.16_90981308_91039960_1	chr1	+	734	7	ISM	ENSMUSG00000026305.16	ENSMUST00000097649.10	3645	8	132	5077	0	-5077	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACGAAGATAACAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	90981307	91039960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877
ENSMUSG00000026305.16_90981308_91040013_1	chr1	+	787	7	ISM	ENSMUSG00000026305.16	ENSMUST00000097649.10	3645	8	132	5024	0	-5024	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGGTAAGAGCTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	90981307	91040013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877
ENSMUSG00000026305.16_90996283_91056662_1	chr1	+	1915	11	NIC	ENSMUSG00000026305.16	novel	2849	23	NA	NA	14975	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGTGTGGGTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	90996282	91056662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_90996386_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
ENSMUSG00000026305.16_90996310_91042389_1	chr1	+	702	7	ISM	ENSMUSG00000026305.16	ENSMUST00000097649.10	3645	8	15134	2648	15002	-2648	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGCAAGAACAGCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	90996309	91042389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91042317
ENSMUSG00000026305.16_91028905_91042574_1	chr1	+	791	5	ISM	ENSMUSG00000026305.16	ENSMUST00000097649.10	3645	8	47729	2463	47597	-2463	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTCAGAGCAGATCGA	NA	NA	NA	NA	NA	NA	NA	NA	91028904	91042574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91042317
ENSMUSG00000026305.16_91035018_91042744_1	chr1	+	664	3	ISM	ENSMUSG00000026305.16	ENSMUST00000097649.10	3645	8	53842	2293	53710	-2293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACATTTTGGGGCAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	91035017	91042744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91035113_91039877_91040020_91042317
ENSMUSG00000026305.16_91035092_91042878_1	chr1	+	724	3	ISM	ENSMUSG00000026305.16	ENSMUST00000097649.10	3645	8	53916	2159	53784	-2159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGACCTGCAAAGCAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	91035091	91042878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91035113_91039877_91040020_91042317
ENSMUSG00000026308.9_91281704_91283217_1	chr1	+	515	2	ISM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	2966	6921	2966	-6921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGAGGACGGGCGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	91281703	91283217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91282175_91283173
ENSMUSG00000026308.9_91281760_91283273_1	chr1	+	515	2	ISM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	3022	6865	3022	-6865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGGAACTTTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	91281759	91283273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91282175_91283173
ENSMUSG00000026308.9_91281930_91285518_1	chr1	+	510	4	ISM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	3192	4620	3192	-4620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTGGTGCTTCCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	91281929	91285518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91282175_91283173_91283310_91285055_91285143_91285476
ENSMUSG00000026308.9_91282087_91286568_1	chr1	+	526	5	ISM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	3349	3570	3349	-3570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCGGCCCGGCGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	91282086	91286568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91282175_91283173_91283310_91285055_91285143_91285476_91285633_91286509
ENSMUSG00000026308.9_91283270_91287102_1	chr1	+	517	5	ISM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	4532	3036	4532	-3036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCACGCTGTGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	91283269	91287102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91283310_91285055_91285143_91285476_91285633_91286509_91286699_91287057
ENSMUSG00000026308.9_91285494_91288782_1	chr1	+	526	4	ISM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	6756	1356	6756	-1356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTGTATGTGACGGGT	NA	NA	NA	NA	NA	NA	NA	NA	91285493	91288782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91285633_91286509_91286699_91287057_91287204_91288730
ENSMUSG00000026308.9_91285570_91288839_1	chr1	+	507	4	ISM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	6832	1299	6832	-1299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGAGGCCTACGACACT	NA	NA	NA	NA	NA	NA	NA	NA	91285569	91288839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91285633_91286509_91286699_91287057_91287204_91288730
ENSMUSG00000026308.9_91286524_91288943_1	chr1	+	534	3	ISM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	7786	1195	7786	-1195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGACACAGCCCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	91286523	91288943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91286699_91287057_91287204_91288730
ENSMUSG00000026308.9_91286602_91289010_1	chr1	+	523	3	ISM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	7864	1128	7864	-1128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTCATTGTCCTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	91286601	91289010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91286699_91287057_91287204_91288730
ENSMUSG00000026308.9_91286651_91289075_1	chr1	+	539	3	ISM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	7913	1063	7913	-1063	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCCTCCAAGGCATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	91286650	91289075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91286699_91287057_91287204_91288730
ENSMUSG00000026308.9_91287148_91289184_1	chr1	+	510	2	ISM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	8410	954	8410	-954	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGAGGAGAGGGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	91287147	91289184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91287204_91288730
ENSMUSG00000026309.15_91303554_91311113_1	chr1	-	658	5	NNC	ENSMUSG00000026309.15	novel	937	9	NA	NA	15319	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGAGTGACTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	91311113	91303553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311030
ENSMUSG00000026309.15_91303554_91313068_1	chr1	-	864	7	ISM	ENSMUSG00000026309.15	ENSMUST00000027534.13	1368	12	13437	1	13364	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1561	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGAGTGACTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	91313068	91303553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961
ENSMUSG00000026309.15_91303777_91316186_1	chr1	-	888	9	ISM	ENSMUSG00000026309.15	ENSMUST00000027534.13	1368	12	10319	224	10246	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCTGTTGATGCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	91316186	91303776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066
ENSMUSG00000026309.15_91303777_91318389_1	chr1	-	595	7	ISM	ENSMUSG00000026309.15	ENST00000622223.4	937	9	8043	220	8043	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCTGTTGATGCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	91318389	91303776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91318328
ENSMUSG00000026309.15_91303777_91318920_1	chr1	-	658	8	ISM	ENSMUSG00000026309.15	ENST00000622223.4	937	9	7512	220	7512	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCTGTTGATGCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	91318920	91303776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91318328_91318386_91318853
ENSMUSG00000026309.15_91304039_91318385_1	chr1	-	918	9	ISM	ENSMUSG00000026309.15	ENSMUST00000027534.13	1368	12	8120	486	8047	-263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACATCTTAGAGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	91318385	91304038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328
ENSMUSG00000026309.15_91304039_91318920_1	chr1	-	631	7	ISM	ENSMUSG00000026309.15	ENST00000622223.4	937	9	7512	482	7512	-263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACATCTTAGAGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	91318920	91304038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91318328_91318386_91318853
ENSMUSG00000026309.15_91304039_91326422_1	chr1	-	680	8	ISM	ENSMUSG00000026309.15	ENST00000622223.4	937	9	10	482	10	-263	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACATCTTAGAGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	91326422	91304038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91318328_91318386_91318853_91318920_91326372
ENSMUSG00000026309.15_91306186_91318919_1	chr1	-	903	9	ISM	ENSMUSG00000026309.15	ENSMUST00000027534.13	1368	12	7586	2633	7513	-2410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAAACGGTCACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	91318919	91306185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853
ENSMUSG00000026309.15_91306186_91326422_1	chr1	-	953	10	ISM	ENSMUSG00000026309.15	ENSMUST00000027534.13	1368	12	83	2633	10	-2410	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAAACGGTCACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	91326422	91306185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853_91318920_91326372
ENSMUSG00000026309.15_91309573_91326523_1	chr1	-	932	9	ISM	ENSMUSG00000026309.15	ENSMUST00000027534.13	1368	12	-18	6020	-8	-5797	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCAGGGCATTTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	91326523	91309572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853_91318920_91326372
ENSMUSG00000026313.17_91860680_91873707_1	chr1	-	742	4	ISM	ENSMUSG00000026313.17	ENSMUST00000008995.15	3937	26	202408	201	202408	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGGTGCTTAACATTT	NA	NA	NA	NA	NA	NA	NA	NA	91873707	91860679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621
ENSMUSG00000026313.17_91883763_91900503_1	chr1	-	742	8	ISM	ENSMUSG00000026313.17	ENSMUST00000008995.15	3937	26	175612	23284	175612	-23284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGAGTGTATGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	91900503	91883762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421
ENSMUSG00000026313.17_91889209_91903376_1	chr1	-	764	6	ISM	ENSMUSG00000026313.17	ENSMUST00000008995.15	3937	26	172739	28730	172739	-28730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTCTTCAAGGTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	91903376	91889208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160
ENSMUSG00000026313.17_91898682_91909974_1	chr1	-	783	4	ISM	ENSMUSG00000026313.17	ENSMUST00000008995.15	3937	26	166141	38203	166141	-38203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTGGCAAGTGTGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	91909974	91898681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91898799_91900421_91900609_91903160_91903416_91909750
ENSMUSG00000026313.17_91900466_91912254_1	chr1	-	777	4	ISM	ENSMUSG00000026313.17	ENSMUST00000008995.15	3937	26	163861	39987	163861	-39987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCAGTCCAGGAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	91912254	91900465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91900609_91903160_91903416_91909750_91909975_91912099
ENSMUSG00000026313.17_91903285_91915384_1	chr1	-	786	5	ISM	ENSMUSG00000026313.17	ENSMUST00000008995.15	3937	26	160731	42806	160731	-42806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGGCTGGTGTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	91915384	91903284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266
ENSMUSG00000026313.17_91909824_91923838_1	chr1	-	769	6	ISM	ENSMUSG00000026313.17	ENSMUST00000008995.15	3937	26	152277	49345	152277	-49345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCAGCAGCACCAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	91923838	91909823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778
ENSMUSG00000026313.17_91912179_91940439_1	chr1	-	771	7	ISM	ENSMUSG00000026313.17	ENSMUST00000008995.15	3937	26	135676	51700	135676	-51700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCAGCAGCTCACAACCC	NA	NA	NA	NA	NA	NA	NA	NA	91940439	91912178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390
ENSMUSG00000026313.17_91915297_91957856_1	chr1	-	789	6	ISM	ENSMUSG00000026313.17	ENSMUST00000008995.15	3937	26	118259	54818	118259	-54818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCACTGTGCCCAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	91957856	91915296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676
ENSMUSG00000026313.17_91919295_91982694_1	chr1	-	750	6	ISM	ENSMUSG00000026313.17	ENSMUST00000008995.15	3937	26	93421	58816	93421	-58816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGCTGAGAGACGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	91982694	91919294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622
ENSMUSG00000026313.17_91923835_92076115_1	chr1	-	790	6	ISM	ENSMUSG00000026313.17	ENSMUST00000008995.15	3937	26	0	63356	0	-63356	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCCGTCTTGGGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	92076115	91923834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977
ENSMUSG00000026317.8_14938843_14947132_1	chr8	+	1537	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	732	4588	732	-4588	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAATGGCAGCCAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	14938842	14947132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_14939119_14944571_14945231_14946530
ENSMUSG00000026317.8_14939004_14947244_1	chr8	+	1488	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	893	4476	893	-4476	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTTTCATTGCAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	14939003	14947244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_14939119_14944571_14945231_14946530
ENSMUSG00000026319.14_105653468_105663701_1	chr1	+	542	6	ISM	ENSMUSG00000026319.14	ENST00000256858.10	5451	29	61879	19138	61820	-17735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTTCTGCACTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	105653467	105663701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662177_105662350_105663647
ENSMUSG00000026319.14_105654128_105668219_1	chr1	+	525	6	ISM	ENSMUSG00000026319.14	ENST00000256858.10	5451	29	62539	14620	62480	-13217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCTCCAGTGACCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	105654127	105668219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_105654192_105655664_105655714_105658925_105659006_105662177_105662350_105663647_105663748_105668159
ENSMUSG00000026319.14_105663668_105678094_1	chr1	+	531	6	ISM	ENSMUSG00000026319.14	ENSMUST00000190501.7	3852	28	72020	3342	72020	-3342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTACGGACTGACATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	105663667	105678094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046
ENSMUSG00000026322.10_62457084_62561207_1	chr18	+	817	5	ISM	ENSMUSG00000026322.10	ENST00000377888.8	2879	7	118	37632	118	-36511	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAATGCAAGGCTGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	62457083	62561207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_62457387_62474075_62474149_62545242_62545369_62546600_62546802_62561093
ENSMUSG00000026322.10_62457275_62570622_1	chr18	+	835	6	ISM	ENSMUSG00000026322.10	ENST00000377888.8	2879	7	309	28217	0	-27096	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATGTTACAACGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	62457274	62570622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_62457387_62474075_62474149_62545242_62545369_62546600_62546802_62561093_62561248_62570453
ENSMUSG00000026322.10_62457275_62570680_1	chr18	+	893	6	ISM	ENSMUSG00000026322.10	ENST00000377888.8	2879	7	309	28159	0	-27038	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGCACACATCGCATGA	NA	NA	NA	NA	NA	NA	NA	NA	62457274	62570680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_62457387_62474075_62474149_62545242_62545369_62546600_62546802_62561093_62561248_62570453
ENSMUSG00000026322.10_62561099_62597718_1	chr18	+	932	3	ISM	ENSMUSG00000026322.10	ENST00000377888.8	2879	7	104133	1121	86978	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCCGCACTGGACTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	62561098	62597718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_62561248_62570453_62571023_62597504
ENSMUSG00000026322.10_62561152_62597718_1	chr18	+	879	3	ISM	ENSMUSG00000026322.10	ENST00000377888.8	2879	7	104186	1121	87031	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCCGCACTGGACTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	62561151	62597718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_62561248_62570453_62571023_62597504
ENSMUSG00000026322.10_62570518_62597857_1	chr18	+	858	2	ISM	ENSMUSG00000026322.10	ENST00000377888.8	2879	7	113552	982	96397	139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGAAGTCTATGACCTA	NA	NA	NA	NA	NA	NA	NA	NA	62570517	62597857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_62571023_62597504
ENSMUSG00000026322.10_62570655_62597975_1	chr18	+	839	2	ISM	ENSMUSG00000026322.10	ENST00000377888.8	2879	7	113689	864	96534	257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAACATGTGCATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	62570654	62597975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_62571023_62597504
ENSMUSG00000026331.14_97000574_97009075_1	chr1	-	318	3	ISM	ENSMUSG00000026331.14	ENSMUST00000189547.2	2315	14	46951	13335	0	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1425	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTACTGTTTTTTCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	97009075	97000573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97000708_97003553_97003708_97009045
ENSMUSG00000026335.17_97748825_97780863_1	chr1	-	2064	11	ISM	ENSMUSG00000026335.17	ENSMUST00000161567.8	3630	24	124117	0	124117	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTAGCAGTCAGAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	97780863	97748824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97749714_97750660_97750715_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827
ENSMUSG00000026335.17_97748935_97780918_1	chr1	-	2009	11	ISM	ENSMUSG00000026335.17	ENSMUST00000161567.8	3630	24	124062	110	124062	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTTCAGTTGGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	97780918	97748934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97749714_97750660_97750715_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827
ENSMUSG00000026335.17_97748996_97780957_1	chr1	-	1987	11	ISM	ENSMUSG00000026335.17	ENSMUST00000161567.8	3630	24	124023	171	124023	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAACATTATATTGCAATGA	NA	NA	NA	NA	NA	NA	NA	NA	97780957	97748995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97749714_97750660_97750715_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827
ENSMUSG00000026335.17_97749108_97792054_1	chr1	-	1999	12	ISM	ENSMUSG00000026335.17	ENSMUST00000097625.10	4102	26	231303	288	112926	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTCTTTCTTTGGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	97792054	97749107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97749714_97750660_97750715_97753561_97753763_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927
ENSMUSG00000026335.17_97749176_97792189_1	chr1	-	2066	12	ISM	ENSMUSG00000026335.17	ENSMUST00000097625.10	4102	26	231168	356	112791	-351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTGGATGTAAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	97792189	97749175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97749714_97750660_97750715_97753561_97753763_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927
ENSMUSG00000026335.17_97749254_97792189_1	chr1	-	1988	12	ISM	ENSMUSG00000026335.17	ENSMUST00000097625.10	4102	26	231168	434	112791	-429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTTACATTTGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	97792189	97749253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97749714_97750660_97750715_97753561_97753763_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927
ENSMUSG00000026335.17_97749446_97813379_1	chr1	-	1977	14	ISM	ENSMUSG00000026335.17	ENSMUST00000097625.10	4102	26	209978	626	91601	-621	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTAAACTGTACTCGT	NA	NA	NA	NA	NA	NA	NA	NA	97813379	97749445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97749714_97750660_97750715_97753561_97753763_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927_97792246_97811850_97811923_97813326
ENSMUSG00000026335.17_97749446_97813414_1	chr1	-	2012	14	ISM	ENSMUSG00000026335.17	ENSMUST00000097625.10	4102	26	209943	626	91566	-621	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTAAACTGTACTCGT	NA	NA	NA	NA	NA	NA	NA	NA	97813414	97749445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97749714_97750660_97750715_97753561_97753763_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927_97792246_97811850_97811923_97813326
ENSMUSG00000026335.17_97749446_97813464_1	chr1	-	2062	14	ISM	ENSMUSG00000026335.17	ENSMUST00000097625.10	4102	26	209893	626	91516	-621	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTAAACTGTACTCGT	NA	NA	NA	NA	NA	NA	NA	NA	97813464	97749445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97749714_97750660_97750715_97753561_97753763_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927_97792246_97811850_97811923_97813326
ENSMUSG00000026335.17_97753650_97824978_1	chr1	-	2007	16	ISM	ENSMUSG00000026335.17	ENSMUST00000097625.10	4102	26	198379	4830	80002	-4825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTACAACCCTTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	97824978	97753649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97753763_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927_97792246_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932
ENSMUSG00000026335.17_97762133_97852241_1	chr1	-	2081	17	ISM	ENSMUSG00000026335.17	ENSMUST00000058762.15	4095	26	171105	13314	52739	-13308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTTCATTTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	97852241	97762132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927_97792246_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155
ENSMUSG00000026335.17_97765688_97862463_1	chr1	-	2060	17	ISM	ENSMUSG00000026335.17	ENSMUST00000058762.15	4095	26	160883	16869	42517	-16863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTATATGCACTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	97862463	97765687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927_97792246_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375
ENSMUSG00000026335.17_97768029_97903529_1	chr1	-	1998	18	ISM	ENSMUSG00000026335.17	ENSMUST00000058762.15	4095	26	119817	19210	1451	-19204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGCAATCTCATATATA	NA	NA	NA	NA	NA	NA	NA	NA	97903529	97768028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927_97792246_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509
ENSMUSG00000026335.17_97768089_97903580_1	chr1	-	1989	18	ISM	ENSMUSG00000026335.17	ENSMUST00000058762.15	4095	26	119766	19270	1400	-19264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGACTGACACCAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	97903580	97768088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927_97792246_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509
ENSMUSG00000026335.17_97768144_97903630_1	chr1	-	1984	18	ISM	ENSMUSG00000026335.17	ENSMUST00000058762.15	4095	26	119716	19325	1350	-19319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACCTGAACCAGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	97903630	97768143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927_97792246_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509
ENSMUSG00000026335.17_97768467_97904793_1	chr1	-	2091	18	ISM	ENSMUSG00000026335.17	ENSMUST00000058762.15	4095	26	118553	19648	187	-19642	internal_fragment	TRUE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTCTCACCAAGCGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	97904793	97768466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927_97792246_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581
ENSMUSG00000026335.17_97768518_97904793_1	chr1	-	2040	18	ISM	ENSMUSG00000026335.17	ENSMUST00000058762.15	4095	26	118553	19699	187	-19693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTGGAGCTGTCTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	97904793	97768517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927_97792246_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581
ENSMUSG00000026335.17_97768576_97904806_1	chr1	-	1995	18	ISM	ENSMUSG00000026335.17	ENSMUST00000058762.15	4095	26	118540	19757	174	-19751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACCTGGCAGCGACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	97904806	97768575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927_97792246_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581
ENSMUSG00000026335.17_97772319_97904984_1	chr1	-	2043	16	ISM	ENSMUSG00000026335.17	ENSMUST00000058762.15	4095	26	118362	23500	-4	-23494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAAATGGCTTAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	97904984	97772318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97772438_97780827_97780958_97791927_97792246_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581
ENSMUSG00000026335.17_97780828_98023346_1	chr1	-	2061	16	ISM	ENSMUSG00000026335.17	ENSMUST00000058762.15	4095	26	0	32009	0	-32003	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTAATGTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	98023346	97780827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_97780958_97791927_97792246_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98023209
ENSMUSG00000026341.17_125320643_125324925_1	chr1	-	1351	3	ISM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	38359	0	38188	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATGGTTTTTCTTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	125324925	125320642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_125321828_125322804_125322889_125324843
ENSMUSG00000026341.17_125320643_125333725_1	chr1	-	1806	6	ISM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	29559	0	29388	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATGGTTTTTCTTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	125333725	125320642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581
ENSMUSG00000026341.17_125320643_125335136_1	chr1	-	1914	7	ISM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	28148	0	27977	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATGGTTTTTCTTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	125335136	125320642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028
ENSMUSG00000026341.17_125320926_125339111_1	chr1	-	1838	9	ISM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	24173	283	24002	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGATTCTGCAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	125339111	125320925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000
ENSMUSG00000026341.17_125320989_125331273_1	chr1	-	1286	5	ISM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	32011	346	31840	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTTACTACTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	125331273	125320988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129
ENSMUSG00000026341.17_125321221_125363165_1	chr1	-	1868	12	FSM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	119	578	-52	-578	multi-exon	FALSE	canonical	NA	NA	NA	NA	2428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCCAACGGTTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	125363165	125321220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
ENSMUSG00000026341.17_125321338_125336339_1	chr1	-	1302	8	ISM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	26945	695	26774	-695	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTAGTATTGGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	125336339	125321337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256
ENSMUSG00000026341.17_125321357_125363464_1	chr1	-	1839	13	FSM	ENSMUSG00000026341.17	ENSMUST00000027579.17	2554	13	0	715	0	-714	multi-exon	FALSE	canonical	NA	NA	NA	NA	1938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAAAAAAGTCAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	125363464	125321356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ENSMUSG00000026342.11_125488893_125500159_1	chr1	+	761	7	ISM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	140	23398	140	-23398	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCAAGAATCCATACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	125488892	125500159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_125489022_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049
ENSMUSG00000026342.11_125488975_125500227_1	chr1	+	747	7	ISM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	222	23330	222	-23330	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTTGTGGTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	125488974	125500227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_125489022_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049
ENSMUSG00000026342.11_125490020_125502447_1	chr1	+	750	7	ISM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	1267	21110	1267	-21110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTTGCCATAGTGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	125490019	125502447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402
ENSMUSG00000026342.11_125490305_125507035_1	chr1	+	760	8	ISM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	1552	16522	1552	-16522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGTCTGCTGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	125490304	125507035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999
ENSMUSG00000026342.11_125494204_125512294_1	chr1	+	821	8	ISM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	5451	11263	5451	-11263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTACATGTTTAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	125494203	125512294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189
ENSMUSG00000026342.11_125496284_125512970_1	chr1	+	836	8	ISM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	7531	10587	7531	-10587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCTATGTTATTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	125496283	125512970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810
ENSMUSG00000026342.11_125500113_125517579_1	chr1	+	751	8	ISM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	11360	5978	11360	-5978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTGTATTTTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	125500112	125517579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547
ENSMUSG00000026342.11_125500216_125517702_1	chr1	+	771	8	ISM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	11463	5855	11463	-5855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTTTATCCCATAATG	NA	NA	NA	NA	NA	NA	NA	NA	125500215	125517702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547
ENSMUSG00000026342.11_125503910_125518852_1	chr1	+	746	7	ISM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	15157	4705	15157	-4705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCAGTCCAGGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	125503909	125518852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769
ENSMUSG00000026342.11_125512250_125522885_1	chr1	+	784	6	ISM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	23497	672	23497	-672	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGGAACTCCTCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	125512249	125522885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
ENSMUSG00000026342.11_125515130_125523098_1	chr1	+	764	4	ISM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	26377	459	26377	-459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGGCGAGTGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	125515129	125523098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_125515193_125517547_125517703_125518769_125518867_125522649
ENSMUSG00000026343.7_125604857_125801599_1	chr1	+	2566	2	FSM	ENSMUSG00000026343.7	ENSMUST00000027581.7	2691	2	125	0	125	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCCCTCACCACTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	125604856	125801599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_125605930_125800106
ENSMUSG00000026349.15_127702007_127731545_1	chr1	+	2281	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	106	2124	63	-2124	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTTCAAGCTTCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	127702006	127731545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ENSMUSG00000026349.15_127702051_127731603_1	chr1	+	2295	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	150	2066	107	-2066	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTTGAATGAGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	127702050	127731603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ENSMUSG00000026349.15_127702838_127731735_1	chr1	+	2355	9	ISM	ENSMUSG00000026349.15	ENST00000295238.10	4424	11	894	1935	894	-1934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTTGTATGTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	127702837	127731735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ENSMUSG00000026349.15_127721095_127731936_1	chr1	+	2345	7	ISM	ENSMUSG00000026349.15	ENST00000295238.10	4424	11	19151	1734	19151	-1733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAATGTGGTGCCATGGGT	NA	NA	NA	NA	NA	NA	NA	NA	127721094	127731936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ENSMUSG00000026349.15_127727203_127732120_1	chr1	+	2283	4	ISM	ENSMUSG00000026349.15	ENST00000295238.10	4424	11	25259	1550	25259	-1549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGAAAGCAGCTAATAATT	NA	NA	NA	NA	NA	NA	NA	NA	127727202	127732120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127727291_127729342_127729414_127729898_127731031_127731128
ENSMUSG00000026349.15_127729342_127732315_1	chr1	+	2391	3	ISM	ENSMUSG00000026349.15	ENST00000295238.10	4424	11	27398	1355	27398	-1354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGAGAGAGAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	127729341	127732315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127729414_127729898_127731031_127731128
ENSMUSG00000026349.15_127730174_127732606_1	chr1	+	2290	3	ISM	ENSMUSG00000026349.15	ENST00000295238.10	4424	11	28230	1064	28230	-1063	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTCATTGAGGTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	127730173	127732606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127731031_127731128_127732316_127732360
ENSMUSG00000026349.15_127730509_127732936_1	chr1	+	2285	3	ISM	ENSMUSG00000026349.15	ENST00000295238.10	4424	11	28565	734	28565	-733	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTAGCTATTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	127730508	127732936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127731031_127731128_127732316_127732360
ENSMUSG00000026349.15_127730783_127733239_1	chr1	+	2314	3	ISM	ENSMUSG00000026349.15	ENST00000295238.10	4424	11	28839	431	28839	-430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACCTCAACAGAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	127730782	127733239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127731031_127731128_127732316_127732360
ENSMUSG00000026349.15_127731222_127733561_1	chr1	+	2295	2	ISM	ENSMUSG00000026349.15	ENST00000295238.10	4424	11	29278	109	29278	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGTGCTTCCAGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	127731221	127733561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127732316_127732360
ENSMUSG00000026349.15_127731281_127733669_1	chr1	+	2344	2	ISM	ENSMUSG00000026349.15	ENST00000295238.10	4424	11	29337	1	29337	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATTGTGTGAACTATT	NA	NA	NA	NA	NA	NA	NA	NA	127731280	127733669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127732316_127732360
ENSMUSG00000026349.15_127731339_127733670_1	chr1	+	2287	2	ISM	ENSMUSG00000026349.15	ENST00000295238.10	4424	11	29395	0	29395	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGTGTGAACTATTC	NA	NA	NA	NA	NA	NA	NA	NA	127731338	127733670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127732316_127732360
ENSMUSG00000026353.10_128171899_128188625_1	chr1	+	963	7	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	0	18490	0	-18490	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGACTCACTTAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	128171898	128188625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570
ENSMUSG00000026353.10_128172113_128194054_1	chr1	+	942	9	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	214	13061	214	-13061	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGACAAAGGAAGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	128172112	128194054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026
ENSMUSG00000026353.10_128172236_128197646_1	chr1	+	957	10	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	337	9469	337	-9469	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTACAAACCAGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	128172235	128197646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605
ENSMUSG00000026353.10_128180017_128200593_1	chr1	+	924	10	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	8118	6522	8118	-6522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGTTTCCCAGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	128180016	128200593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557
ENSMUSG00000026353.10_128183903_128202607_1	chr1	+	987	9	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	12004	4508	12004	-4508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATCCATTCCTGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	128183902	128202607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538
ENSMUSG00000026353.10_128186710_128204757_1	chr1	+	972	9	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	14811	2358	14811	-2358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGACTGAGGACTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	128186709	128204757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ENSMUSG00000026353.10_128190527_128204990_1	chr1	+	1028	6	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	18628	2125	18628	-2125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATAGCTGGATGCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	128190526	128204990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ENSMUSG00000026353.10_128197604_128205214_1	chr1	+	961	4	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	25705	1901	25705	-1901	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGATGTTTAGCGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	128197603	128205214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_128197709_128200557_128200690_128202538_128202742_128204693
ENSMUSG00000026353.10_128200591_128205356_1	chr1	+	965	3	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	28692	1759	28692	-1759	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTGTTGTACAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	128200590	128205356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_128200690_128202538_128202742_128204693
ENSMUSG00000026353.10_128202586_128205469_1	chr1	+	932	2	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	30687	1646	30687	-1646	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAAACTCTGTGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	128202585	128205469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_128202742_128204693
ENSMUSG00000026353.10_128202641_128205532_1	chr1	+	940	2	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	30742	1583	30742	-1583	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGATGAGAATGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	128202640	128205532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_128202742_128204693
ENSMUSG00000026353.10_128202692_128205591_1	chr1	+	948	2	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	30793	1524	30793	-1524	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACATGCAGCAGTCACAC	NA	NA	NA	NA	NA	NA	NA	NA	128202691	128205591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_128202742_128204693
ENSMUSG00000026355.12_128259327_128267162_1	chr1	-	1132	6	ISM	ENSMUSG00000026355.12	ENSMUST00000027601.11	2910	17	20239	0	20222	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	128267162	128259326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086
ENSMUSG00000026355.12_128259483_128269080_1	chr1	-	1088	7	ISM	ENSMUSG00000026355.12	ENSMUST00000027601.11	2910	17	18321	156	18304	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAAGTTGGAACCAAATC	NA	NA	NA	NA	NA	NA	NA	NA	128269080	128259482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021
ENSMUSG00000026355.12_128259612_128271200_1	chr1	-	1109	8	ISM	ENSMUSG00000026355.12	ENSMUST00000027601.11	2910	17	16201	285	16184	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACGGCACTGAGAGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	128271200	128259611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147
ENSMUSG00000026355.12_128259743_128272090_1	chr1	-	1090	9	ISM	ENSMUSG00000026355.12	ENSMUST00000027601.11	2910	17	15311	416	15294	-413	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGGAAGCGAGAGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	128272090	128259742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033
ENSMUSG00000026355.12_128261338_128273643_1	chr1	-	1080	9	ISM	ENSMUSG00000026355.12	ENSMUST00000190495.2	4355	16	13741	2008	13741	-2008	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGAATCAGAGATAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	128273643	128261337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608
ENSMUSG00000026355.12_128262597_128276178_1	chr1	-	1107	9	ISM	ENSMUSG00000026355.12	ENSMUST00000190495.2	4355	16	11206	3267	11206	-3267	internal_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGACTGTTTCCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	128276178	128262596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105
ENSMUSG00000026355.12_128263566_128276707_1	chr1	-	1073	9	ISM	ENSMUSG00000026355.12	ENSMUST00000190495.2	4355	16	10677	4236	10677	-4236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAATCAATCATCCGT	NA	NA	NA	NA	NA	NA	NA	NA	128276707	128263565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661
ENSMUSG00000026355.12_128265894_128277055_1	chr1	-	1110	9	ISM	ENSMUSG00000026355.12	ENSMUST00000190495.2	4355	16	10329	6564	10329	-6564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTCAGAATCAATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	128277055	128265893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040
ENSMUSG00000026355.12_128265999_128277186_1	chr1	-	1136	9	ISM	ENSMUSG00000026355.12	ENSMUST00000190495.2	4355	16	10198	6669	10198	-6669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTCATTGTGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	128277186	128265998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040
ENSMUSG00000026355.12_128267205_128279267_1	chr1	-	1120	9	ISM	ENSMUSG00000026355.12	ENSMUST00000190495.2	4355	16	8117	7875	8117	-7875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATTGCCAGGCGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	128279267	128267204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169
ENSMUSG00000026355.12_128271209_128281240_1	chr1	-	1088	8	ISM	ENSMUSG00000026355.12	ENSMUST00000190495.2	4355	16	6144	11879	6144	-11879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTATTCACGAAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	128281240	128271208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196
ENSMUSG00000026355.12_128272111_128283306_1	chr1	-	1088	8	ISM	ENSMUSG00000026355.12	ENSMUST00000190495.2	4355	16	4078	12781	4078	-12781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGCAGCTGTGGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	128283306	128272110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249
ENSMUSG00000026355.12_128272125_128283307_1	chr1	-	1075	8	ISM	ENSMUSG00000026355.12	ENSMUST00000190495.2	4355	16	4077	12795	4077	-12795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGCTGCCGGCTTAACAG	NA	NA	NA	NA	NA	NA	NA	NA	128283307	128272124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249
ENSMUSG00000026355.12_128273650_128287215_1	chr1	-	1092	8	ISM	ENSMUSG00000026355.12	ENSMUST00000190495.2	4355	16	169	14320	169	-14320	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGTGATCCAAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	128287215	128273649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ENSMUSG00000026355.12_128273680_128287384_1	chr1	-	1231	8	ISM	ENSMUSG00000026355.12	ENSMUST00000190495.2	4355	16	0	14350	0	-14350	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCTTCGTGGGGATAT	NA	NA	NA	NA	NA	NA	NA	NA	128287384	128273679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ENSMUSG00000026355.12_128273728_128287384_1	chr1	-	1183	8	ISM	ENSMUSG00000026355.12	ENSMUST00000190495.2	4355	16	0	14398	0	-14398	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTACTGATGTTGTTCGG	NA	NA	NA	NA	NA	NA	NA	NA	128287384	128273727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ENSMUSG00000026356.16_128291792_128294700_1	chr1	-	386	3	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	50396	348	50396	-348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAACGTTTTAATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	128294700	128291791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128292063_128294434_128294507_128294657
ENSMUSG00000026356.16_128292037_128299901_1	chr1	-	359	6	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	45195	593	45195	-593	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGATTGCATAACGTACG	NA	NA	NA	NA	NA	NA	NA	NA	128299901	128292036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876
ENSMUSG00000026356.16_128294709_128301720_1	chr1	-	379	5	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	43376	3265	43376	-3265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCATGATCCTCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	128301720	128294708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673
ENSMUSG00000026356.16_128297230_128303938_1	chr1	-	362	4	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	41158	5786	41158	-5786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGATTAATACATGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	128303938	128297229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128297273_128299876_128300024_128301673_128301822_128303914
ENSMUSG00000026356.16_128299987_128306551_1	chr1	-	369	4	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	38545	8543	38545	-8543	internal_fragment	TRUE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGAGCCGTTCAAATT	NA	NA	NA	NA	NA	NA	NA	NA	128306551	128299986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128300024_128301673_128301822_128303914_128304050_128306502
ENSMUSG00000026356.16_128301774_128316886_1	chr1	-	386	5	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	28210	10330	28210	-10330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTTGGATATTGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	128316886	128301773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855
ENSMUSG00000026356.16_128319073_128344950_1	chr1	-	354	5	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	146	27629	146	20782	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGGAAAGTCAATCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	128344950	128319072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ENSMUSG00000026361.10_143483971_143493083_1	chr1	-	635	4	ISM	ENSMUSG00000026361.10	ENST00000635846.1	2513	14	85294	857	85294	-857	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTACTTAAAATTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	143493083	143483970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016
ENSMUSG00000026361.10_143484041_143493143_1	chr1	-	625	4	ISM	ENSMUSG00000026361.10	ENST00000635846.1	2513	14	85234	927	85234	-927	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTAGCCTTCTAGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	143493143	143484040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016
ENSMUSG00000026361.10_143484219_143510785_1	chr1	-	622	7	ISM	ENSMUSG00000026361.10	ENST00000635846.1	2513	14	67592	1105	67592	-1105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGATACAGCTTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	143510785	143484218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769
ENSMUSG00000026361.10_143485114_143553421_1	chr1	-	626	7	ISM	ENSMUSG00000026361.10	ENST00000635846.1	2513	14	24956	2000	24956	-2000	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAGGTAATTATGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	143553421	143485113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143553376
ENSMUSG00000026361.10_143485168_143553477_1	chr1	-	628	7	ISM	ENSMUSG00000026361.10	ENST00000635846.1	2513	14	24900	2054	24900	-2054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCATAAACGTCACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	143553477	143485167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143553376
ENSMUSG00000026361.10_143485207_143553540_1	chr1	-	652	7	ISM	ENSMUSG00000026361.10	ENST00000635846.1	2513	14	24837	2093	24837	-2093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTCAAAAGTGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	143553540	143485206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143553376
ENSMUSG00000026361.10_143491095_143561677_1	chr1	-	625	7	ISM	ENSMUSG00000026361.10	ENST00000635846.1	2513	14	16700	7981	16700	-7981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGGCCATGGCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	143561677	143491094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143553376_143553594_143561660
ENSMUSG00000026361.10_143493016_143567067_1	chr1	-	706	7	ISM	ENSMUSG00000026361.10	ENST00000635846.1	2513	14	11310	9902	11310	-9902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATACGCCCTTCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	143567067	143493015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143553376_143553594_143561660_143561750_143567012
ENSMUSG00000026361.10_143493142_143567214_1	chr1	-	641	8	ISM	ENSMUSG00000026361.10	ENST00000635846.1	2513	14	11163	10028	11163	-10028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACGAGAAAATGAAACACT	NA	NA	NA	NA	NA	NA	NA	NA	143567214	143493141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143553376_143553594_143561660_143561750_143567012_143567066_143567151
ENSMUSG00000026361.10_143503240_143571200_1	chr1	-	674	8	ISM	ENSMUSG00000026361.10	ENST00000635846.1	2513	14	7177	20126	7177	-20126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAATTTATAGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	143571200	143503239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_143503328_143503583_143503620_143510769_143510828_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130
ENSMUSG00000026361.10_143503583_143575061_1	chr1	-	694	8	ISM	ENSMUSG00000026361.10	ENST00000635846.1	2513	14	3316	20469	3316	-20469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTGTGCCTTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	143575061	143503582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_143503620_143510769_143510828_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954
ENSMUSG00000026365.16_140016396_140030284_1	chr1	-	921	5	ISM	ENSMUSG00000026365.16	ENST00000367429.9	3441	20	60577	0	60577	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTACCTTATTCTCATA	NA	NA	NA	NA	NA	NA	NA	NA	140030284	140016395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_140016579_140026607_140026785_140028545_140028723_140029322_140029497_140030074
ENSMUSG00000026365.16_140026608_140030622_1	chr1	-	915	5	ISM	ENSMUSG00000026365.16	ENST00000367429.9	3441	20	60239	10212	60239	-10212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGCATCATTTTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	140030622	140026607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_140026785_140028545_140028723_140029322_140029497_140030074_140030285_140030445
ENSMUSG00000026365.16_140028546_140033309_1	chr1	-	915	5	ISM	ENSMUSG00000026365.16	ENST00000367429.9	3441	20	57552	12150	57552	-12150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGGATGGGCTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	140033309	140028545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_140028723_140029322_140029497_140030074_140030285_140030445_140030623_140033132
ENSMUSG00000026365.16_140028698_140036373_1	chr1	-	907	6	ISM	ENSMUSG00000026365.16	ENST00000367429.9	3441	20	54488	12302	54488	-12302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTTAAAAATGCCATAATAA	NA	NA	NA	NA	NA	NA	NA	NA	140036373	140028697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_140028723_140029322_140029497_140030074_140030285_140030445_140030623_140033132_140033310_140036229
ENSMUSG00000026365.16_140030267_140040302_1	chr1	-	867	6	ISM	ENSMUSG00000026365.16	ENSMUST00000066859.13	4361	22	70847	16670	50559	-13871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCCCTACAATAGAACAT	NA	NA	NA	NA	NA	NA	NA	NA	140040302	140030266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_140030285_140030445_140030623_140033132_140033310_140036229_140036410_140036495_140036679_140040170
ENSMUSG00000026365.16_140030574_140046422_1	chr1	-	861	6	ISM	ENSMUSG00000026365.16	ENSMUST00000066859.13	4361	22	64727	16977	44439	-14178	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACCACCGTGAAATACT	NA	NA	NA	NA	NA	NA	NA	NA	140046422	140030573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_140030623_140033132_140033310_140036229_140036410_140036495_140036679_140040170_140040345_140046324
ENSMUSG00000026365.16_140033290_140047736_1	chr1	-	862	6	ISM	ENSMUSG00000026365.16	ENSMUST00000066859.13	4361	22	63413	19693	43125	-16894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAGTGCTGAAGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	140047736	140033289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_140033310_140036229_140036410_140036495_140036679_140040170_140040345_140046324_140046502_140047608
ENSMUSG00000026365.16_140036271_140063905_1	chr1	-	877	6	ISM	ENSMUSG00000026365.16	ENSMUST00000066859.13	4361	22	47244	22674	26956	-19875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCATTAGTGGAAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	140063905	140036270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_140036410_140036495_140036679_140040170_140040345_140046324_140046502_140047608_140047792_140063884
ENSMUSG00000026365.16_140040165_140064628_1	chr1	-	912	5	ISM	ENSMUSG00000026365.16	ENST00000367429.9	3441	20	26233	23769	26233	-23769	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTTTTATATTTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	140064628	140040164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_140040345_140046324_140046502_140047608_140047792_140063884_140064062_140064433
ENSMUSG00000026365.16_140046325_140071842_1	chr1	-	906	5	ISM	ENSMUSG00000026365.16	ENST00000367429.9	3441	20	19019	29929	19019	-29929	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCTATTTTCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	140071842	140046324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_140046502_140047608_140047792_140063884_140064062_140064433_140064629_140071668
ENSMUSG00000026365.16_140046458_140075563_1	chr1	-	944	6	ISM	ENSMUSG00000026365.16	ENST00000367429.9	3441	20	15298	30062	15298	-30062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGGACATGGTTTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	140075563	140046457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_140046502_140047608_140047792_140063884_140064062_140064433_140064629_140071668_140071843_140075392
ENSMUSG00000026365.16_140063885_140082398_1	chr1	-	909	5	ISM	ENSMUSG00000026365.16	ENST00000367429.9	3441	20	8463	47489	8463	-47489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAACCAGCCCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	140082398	140063884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_140064062_140064433_140064629_140071668_140071843_140075392_140075564_140082206
ENSMUSG00000026365.16_140064433_140090389_1	chr1	-	916	6	ISM	ENSMUSG00000026365.16	ENST00000367429.9	3441	20	472	48037	472	-48037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCAATGTCTTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	140090389	140064432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_140064629_140071668_140071843_140075392_140075564_140082206_140082399_140084997_140085075_140090283
ENSMUSG00000026374.15_118227991_118232956_1	chr1	-	884	3	ISM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	6190	5483	6190	-5483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTACTAAAACAGAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	118232956	118227990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118228768_118232420_118232501_118232929
ENSMUSG00000026374.15_118228056_118232995_1	chr1	-	858	3	ISM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	6151	5548	6151	-5548	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTAAGTCTTGTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	118232995	118228055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118228768_118232420_118232501_118232929
ENSMUSG00000026374.15_118228104_118233045_1	chr1	-	860	3	ISM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	6101	5596	6101	-5596	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTGTGAGAATAAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	118233045	118228103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118228768_118232420_118232501_118232929
ENSMUSG00000026374.15_118228231_118237596_1	chr1	-	924	5	ISM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	1550	5723	1550	-5723	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTACCTGACTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	118237596	118228230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502
ENSMUSG00000026374.15_118228619_118239146_1	chr1	-	952	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	0	6111	0	-6111	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAAGAAAGTAGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	118239146	118228618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
ENSMUSG00000026377.13_118249569_118260115_1	chr1	+	723	6	ISM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	0	1437	0	-556	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGGAGAAGATGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	118249568	118260115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073
ENSMUSG00000026377.13_118249694_118260208_1	chr1	+	691	6	ISM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	125	1344	110	-463	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATGCCCTTGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	118249693	118260208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073
ENSMUSG00000026377.13_118251310_118260516_1	chr1	+	696	6	ISM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	1741	1036	1726	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGAAAATCGCAGGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	118251309	118260516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
ENSMUSG00000026377.13_118255354_118260671_1	chr1	+	706	5	ISM	ENSMUSG00000026377.13	ENSMUST00000112688.10	849	6	5770	0	5770	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGCCAGCGTTCTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	118255353	118260671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
ENSMUSG00000026377.13_118257131_118260802_1	chr1	+	679	4	ISM	ENSMUSG00000026377.13	ENSMUST00000112688.10	849	6	7547	-131	7547	131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAAGCCACTGGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	118257130	118260802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118257295_118258335_118258393_118260073_118260209_118260479
ENSMUSG00000026377.13_118258342_118260958_1	chr1	+	665	3	ISM	ENSMUSG00000026377.13	ENSMUST00000112688.10	849	6	8758	-287	8758	287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCCCTCCAAAATATGT	NA	NA	NA	NA	NA	NA	NA	NA	118258341	118260958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118258393_118260073_118260209_118260479
ENSMUSG00000026377.13_118260100_118261070_1	chr1	+	700	2	ISM	ENSMUSG00000026377.13	ENSMUST00000112688.10	849	6	10516	-399	10516	399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGGAGTCCGAAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	118260099	118261070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118260209_118260479
ENSMUSG00000026377.13_118260159_118261112_1	chr1	+	683	2	ISM	ENSMUSG00000026377.13	ENSMUST00000112688.10	849	6	10575	-441	10575	-440	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTAGGTGTCACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	118260158	118261112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118260209_118260479
ENSMUSG00000026385.17_120041010_120048808_1	chr1	-	562	4	NNC	ENSMUSG00000026385.17	novel	569	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTTGTCTGGGTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	120048808	120041009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_120041264_120044115_120044179_120047624_120047743_120048681
ENSMUSG00000026389.17_120153156_120169285_1	chr1	-	2792	3	ISM	ENSMUSG00000026389.17	ENSMUST00000112640.8	2752	5	23729	-997	23729	997	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGTGCCCACTTTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	120169285	120153155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_120155659_120161971_120162137_120169161
ENSMUSG00000026389.17_120154153_120197837_1	chr1	-	2824	5	FSM	ENSMUSG00000026389.17	ENSMUST00000112639.8	2931	5	316	-209	316	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACAATAGTTAAAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	120197837	120154152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120197712
ENSMUSG00000026389.17_120154153_120197886_1	chr1	-	2873	5	FSM	ENSMUSG00000026389.17	ENSMUST00000112639.8	2931	5	267	-209	267	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACAATAGTTAAAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	120197886	120154152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120197712
ENSMUSG00000026389.17_120154383_120198812_1	chr1	-	2891	6	FSM	ENSMUSG00000026389.17	ENSMUST00000112641.8	5158	6	0	2267	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGGGACCCTTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	120198812	120154382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120197712_120197990_120198667
ENSMUSG00000026393.11_138412469_138426378_1	chr1	-	2445	2	ISM	ENSMUSG00000026393.11	ENSMUST00000187407.7	4336	10	121501	894	121034	-619	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTTAACAATCACCTATA	NA	NA	NA	NA	NA	NA	NA	NA	138426378	138412468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_138414849_138426313
ENSMUSG00000026393.11_138412976_138462151_1	chr1	-	2460	7	ISM	ENSMUSG00000026393.11	ENST00000538004.5	1024	10	85323	-1762	85261	-1126	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTGTGTTATATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	138462151	138412975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101
ENSMUSG00000026393.11_138413298_138547412_1	chr1	-	2498	10	FSM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	75	2685	0	1440	multi-exon	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTGGGAAGGCTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	138547412	138413297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ENSMUSG00000026393.11_138413348_138547422_1	chr1	-	2458	10	FSM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	65	2735	-10	1390	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAACAGAGTAATCGTG	NA	NA	NA	NA	NA	NA	NA	NA	138547422	138413347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ENSMUSG00000026393.11_138413419_138547463_1	chr1	-	2428	10	FSM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	24	2806	11	1319	multi-exon	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGAGGTGGAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	138547463	138413418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ENSMUSG00000026393.11_138414737_138547487_1	chr1	-	1032	10	NNC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTACAAGATCCTGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	138547487	138414736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471946_138472082_138489440_138489524_138547385
ENSMUSG00000026393.11_138414737_138547487_2	chr1	-	1038	10	FSM	ENSMUSG00000026393.11	ENST00000538004.5	1024	10	-13	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTACAAGATCCTGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	138547487	138414736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547385
ENSMUSG00000026393.11_138414737_138547487_3	chr1	-	1028	10	NNC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTACAAGATCCTGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	138547487	138414736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489514_138547385
ENSMUSG00000026394.6_138211361_138215588_1	chr1	+	208	2	ISM	ENSMUSG00000026394.6	ENST00000309309.11	436	3	9889	114	9885	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGAACGGAAGCTACAAC	NA	NA	NA	NA	NA	NA	NA	NA	138211360	138215588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_138211505_138215524
ENSMUSG00000026398.15_136772761_136810056_1	chr1	-	743	2	ISM	ENSMUSG00000026398.15	ENSMUST00000168126.7	3446	7	67244	747	67244	291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTCCCCATCCCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	136810056	136772760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_136773449_136810001
ENSMUSG00000026398.15_136772827_136810098_1	chr1	-	719	2	ISM	ENSMUSG00000026398.15	ENSMUST00000168126.7	3446	7	67202	813	67202	225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCCTGAATTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	136810098	136772826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_136773449_136810001
ENSMUSG00000026398.15_136810008_136868658_1	chr1	-	774	3	ISM	ENSMUSG00000026398.15	ENSMUST00000168126.7	3446	7	8642	37994	8642	-36807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGGTAAGCGAAGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	136868658	136810007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_136810150_136818420_136818541_136868146
ENSMUSG00000026398.15_136810125_136868787_1	chr1	-	786	3	ISM	ENSMUSG00000026398.15	ENSMUST00000168126.7	3446	7	8513	38111	8513	-36924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGAAGTCGCGTTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	136868787	136810124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_136810150_136818420_136818541_136868146
ENSMUSG00000026398.15_136868372_136888118_1	chr1	-	831	4	ISM	ENSMUSG00000026398.15	ENST00000236914.7	3071	7	144	96526	0	-95171	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCCGGCCAGCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	136888118	136868371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_136868788_136871024_136871167_136872696_136872816_136887964
ENSMUSG00000026398.15_136868449_136888118_1	chr1	-	754	4	ISM	ENSMUSG00000026398.15	ENST00000236914.7	3071	7	144	96603	0	-95248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGAGTACCCAGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	136888118	136868448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_136868788_136871024_136871167_136872696_136872816_136887964
ENSMUSG00000026398.15_136868498_136888211_1	chr1	-	798	4	ISM	ENSMUSG00000026398.15	ENST00000236914.7	3071	7	51	96652	-25	-95297	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGCATGGTTACCAACC	NA	NA	NA	NA	NA	NA	NA	NA	136888211	136868497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_136868788_136871024_136871167_136872696_136872816_136887964
ENSMUSG00000026404.13_136343009_136344620_1	chr1	+	454	2	ISM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	0	23276	0	-23276	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCGGTGGCCAGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	136343008	136344620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136343162_136344319
ENSMUSG00000026404.13_136343128_136344695_1	chr1	+	410	2	ISM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	119	23201	119	-23201	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGAAGACGTGTGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	136343127	136344695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136343162_136344319
ENSMUSG00000026404.13_136344787_136347219_1	chr1	+	420	2	ISM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	1778	20677	1778	-20677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGATGAGTGGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	136344786	136347219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136345135_136347147
ENSMUSG00000026404.13_136344864_136347272_1	chr1	+	396	2	ISM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	1855	20624	1855	-20624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCCCCCACAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	136344863	136347272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136345135_136347147
ENSMUSG00000026404.13_136347233_136360295_1	chr1	+	419	3	ISM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	4224	7601	4224	-7601	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATGTGAGTGTTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	136347232	136360295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136347316_136352532_136352623_136360049
ENSMUSG00000026404.13_136352563_136361550_1	chr1	+	412	3	ISM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	9554	6346	9554	-6346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATCCATCCACTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	136352562	136361550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136352623_136360049_136360302_136361450
ENSMUSG00000026404.13_136360248_136367551_1	chr1	+	397	4	ISM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	17239	345	17239	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAAGACTCTTCTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	136360247	136367551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136360302_136361450_136361604_136362243_136362373_136367490
ENSMUSG00000026404.13_136361485_136367656_1	chr1	+	414	3	ISM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	18476	240	18476	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAGCAGAAAGACAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	136361484	136367656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136361604_136362243_136362373_136367490
ENSMUSG00000026404.13_136362352_136367896_1	chr1	+	427	2	ISM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	19343	0	19343	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTATTTATTTCAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	136362351	136367896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136362373_136367490
ENSMUSG00000026411.18_135945705_135962741_1	chr1	+	1467	6	FSM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	0	339	0	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTAAATTGTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	135945704	135962741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
ENSMUSG00000026411.18_135945800_135962819_1	chr1	+	1450	6	FSM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	95	261	0	55	multi-exon	FALSE	canonical	NA	NA	NA	NA	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGTTAGGTGCGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	135945799	135962819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
ENSMUSG00000026411.18_135952355_135963080_1	chr1	+	1517	3	ISM	ENSMUSG00000026411.18	ENST00000367332.5	1393	5	6101	-316	6101	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTAAGCAAAACCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	135952354	135963080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_135952465_135955134_135955267_135961805
ENSMUSG00000026414.14_135764092_135776627_1	chr1	+	616	9	NNC	ENSMUSG00000026414.14	novel	1200	16	NA	NA	0	-2549	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGACCCTAGCCCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	135764091	135776627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_135764185_135768602_135768671_135771517_135771553_135773292_135773383_135773635_135773672_135774459_135774494_135775446_135775511_135775718_135775836_135776548
ENSMUSG00000026414.14_135768595_135779999_1	chr1	+	1104	13	NIC	ENSMUSG00000026414.14	novel	1094	14	NA	NA	0	1	combination_of_known_junctions	FALSE	non_canonical	NA	NA	NA	NA	1388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGGAATAGTGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	135768594	135779999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_135768651_135771511_135771553_135773292_135773383_135773635_135773672_135774459_135774494_135775446_135775511_135775718_135775836_135776548_135776627_135777087_135777199_135778448_135778559_135779089_135779181_135779433_135779475_135779764
ENSMUSG00000026418.17_135727159_135738729_1	chr1	+	1078	9	NNC	ENSMUSG00000026418.17	novel	1105	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCTGTAGCCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135727158	135738729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_135727235_135727710_135727759_135730331_135730362_135732790_135732833_135733236_135733369_135735258_135735349_135736376_135736548_135737363_135737474_135738350
ENSMUSG00000026418.17_135727159_135738729_5	chr1	+	1078	9	NNC	ENSMUSG00000026418.17	novel	1105	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCTGTAGCCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135727158	135738729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_135727235_135727710_135727759_135730331_135730362_135732790_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737468_135738350
ENSMUSG00000026418.17_135727159_135738729_6	chr1	+	1084	9	NIC	ENSMUSG00000026418.17	novel	1105	10	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCTGTAGCCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135727158	135738729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_135727235_135727710_135727759_135730331_135730362_135732790_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ENSMUSG00000026418.17_135727159_135738729_7	chr1	+	1067	8	NNC	ENSMUSG00000026418.17	novel	1038	9	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCTGTAGCCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135727158	135738729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_135727235_135727710_135727772_135732790_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ENSMUSG00000026418.17_135727159_135738729_8	chr1	+	1083	8	NNC	ENSMUSG00000026418.17	novel	1038	9	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCTGTAGCCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135727158	135738729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_135727235_135727710_135727788_135732790_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ENSMUSG00000026418.17_135727159_135738729_9	chr1	+	1092	8	NNC	ENSMUSG00000026418.17	novel	1105	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCTGTAGCCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135727158	135738729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_135727235_135727710_135727759_135732752_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ENSMUSG00000026418.17_135727571_135738729_1	chr1	+	1148	8	NIC	ENSMUSG00000026418.17	novel	1150	9	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCTGTAGCCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135727570	135738729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_135727759_135730331_135730362_135732790_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ENSMUSG00000026418.17_135727571_135738729_2	chr1	+	1152	8	NNC	ENSMUSG00000026418.17	novel	1150	9	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCTGTAGCCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135727570	135738729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_135727759_135730331_135730366_135732790_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ENSMUSG00000026418.17_135727709_135738729_1	chr1	+	1007	8	NNC	ENSMUSG00000026418.17	novel	1150	9	NA	NA	138	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCTGTAGCCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135727708	135738729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_135727759_135730331_135730362_135732790_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737366_135737474_135738350
ENSMUSG00000026418.17_135727709_135738729_2	chr1	+	1014	8	NNC	ENSMUSG00000026418.17	novel	1150	9	NA	NA	138	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCTGTAGCCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135727708	135738729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_135727759_135730331_135730366_135732790_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ENSMUSG00000026421.15_135656885_135678937_1	chr1	+	790	6	FSM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	0	1033	0	-1033	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTCCCTCACTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	135656884	135678937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_135657013_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
ENSMUSG00000026421.15_135656885_135679014_1	chr1	+	867	6	FSM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	0	956	0	-956	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGAGCTCCTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	135656884	135679014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_135657013_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
ENSMUSG00000026421.15_135673070_135679255_1	chr1	+	794	4	ISM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	16185	715	16185	-715	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAGGGAGGGTTATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	135673069	135679255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_135673166_135674457_135674588_135678302_135678397_135678781
ENSMUSG00000026421.15_135673070_135679441_1	chr1	+	980	4	ISM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	16185	529	16185	-529	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGAATGGAGAACAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	135673069	135679441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_135673166_135674457_135674588_135678302_135678397_135678781
ENSMUSG00000026421.15_135678301_135679441_1	chr1	+	756	2	ISM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	21416	529	21416	-529	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGAATGGAGAACAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	135678300	135679441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_135678397_135678781
ENSMUSG00000026425.16_131215528_131220383_1	chr1	-	2076	2	ISM	ENSMUSG00000026425.16	ENST00000573034.8	6670	21	232951	1297	232359	-1297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGAAATGATCCTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	131220383	131215527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131217479_131220258
ENSMUSG00000026425.16_131215596_131220464_1	chr1	-	2089	2	ISM	ENSMUSG00000026425.16	ENST00000573034.8	6670	21	232870	1365	232278	-1365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTCTATAGTTCAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	131220464	131215595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131217479_131220258
ENSMUSG00000026425.16_131215797_131224172_1	chr1	-	2122	3	ISM	ENSMUSG00000026425.16	ENST00000573034.8	6670	21	229162	1566	228570	-1566	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACCTTTTTCTACCGTT	NA	NA	NA	NA	NA	NA	NA	NA	131224172	131215796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131217479_131220258_131220584_131224057
ENSMUSG00000026425.16_131216002_131226206_1	chr1	-	2086	4	ISM	ENSMUSG00000026425.16	ENST00000573034.8	6670	21	227128	1771	226536	-1771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTTTGTTATAAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	131226206	131216001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069
ENSMUSG00000026425.16_131216238_131238328_1	chr1	-	2091	6	ISM	ENSMUSG00000026425.16	ENST00000573034.8	6670	21	215006	2007	214414	-2007	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTTTTCCAATATAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	131238328	131216237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211
ENSMUSG00000026425.16_131216523_131247397_1	chr1	-	2155	8	ISM	ENSMUSG00000026425.16	ENST00000573034.8	6670	21	205937	2292	205345	-2292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTCTCATCACAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	131247397	131216522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262
ENSMUSG00000026425.16_131216816_131264182_1	chr1	-	2107	12	ISM	ENSMUSG00000026425.16	ENST00000573034.8	6670	21	189152	2585	188560	-2585	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATATCTGCCAAGGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	131264182	131216815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131264101
ENSMUSG00000026425.16_131217256_131277313_1	chr1	-	2121	15	ISM	ENSMUSG00000026425.16	ENST00000573034.8	6670	21	176021	3025	175429	-3025	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGCCTTCCGGCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	131277313	131217255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131264101_131264213_131272086_131272285_131273499_131273602_131277189
ENSMUSG00000026425.16_131217337_131277350_1	chr1	-	2077	15	ISM	ENSMUSG00000026425.16	ENST00000573034.8	6670	21	175984	3106	175392	-3106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGCCCTCTGCACACC	NA	NA	NA	NA	NA	NA	NA	NA	131277350	131217336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131264101_131264213_131272086_131272285_131273499_131273602_131277189
ENSMUSG00000026425.16_131220380_131284481_1	chr1	-	2061	16	ISM	ENSMUSG00000026425.16	ENST00000573034.8	6670	21	168853	6149	168261	2576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCGCCACTCATCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	131284481	131220379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131264101_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427
ENSMUSG00000026425.16_131220417_131284547_1	chr1	-	2090	16	ISM	ENSMUSG00000026425.16	ENST00000573034.8	6670	21	168787	6186	168195	2539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTCCATCAGCGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	131284547	131220416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131264101_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427
ENSMUSG00000026425.16_131220473_131284611_1	chr1	-	2098	16	ISM	ENSMUSG00000026425.16	ENST00000573034.8	6670	21	168723	6242	168131	2483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCCATCCTCCCAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	131284611	131220472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131264101_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427
ENSMUSG00000026425.16_131238304_131452822_1	chr1	-	2085	16	ISM	ENSMUSG00000026425.16	ENST00000573034.8	6670	21	512	24073	-80	-15348	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATCATCATCCAACATGA	NA	NA	NA	NA	NA	NA	NA	NA	131452822	131238303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131264101_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675
ENSMUSG00000026425.16_131271007_131277248_1	chr1	-	1270	4	ISM	ENSMUSG00000026425.16	ENST00000612199.4	3075	10	176086	216	175494	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACATGATTGATTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	131277248	131271006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131271318_131271486_131272285_131273499_131273602_131277189
ENSMUSG00000026425.16_131271060_131277296_1	chr1	-	1265	4	ISM	ENSMUSG00000026425.16	ENST00000612199.4	3075	10	176038	269	175446	-269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAATTTGTTTAATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	131277296	131271059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131271318_131271486_131272285_131273499_131273602_131277189
ENSMUSG00000026425.16_131271228_131283334_1	chr1	-	1301	5	ISM	ENSMUSG00000026425.16	ENST00000612199.4	3075	10	170000	437	169408	-437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTCCTTATCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	131283334	131271227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131271318_131271486_131272285_131273499_131273602_131277189_131277415_131283248
ENSMUSG00000026425.16_131271504_131284468_1	chr1	-	1278	5	ISM	ENSMUSG00000026425.16	ENST00000605551.2	1007	7	168274	-576	168274	493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTTTTGTTTGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	131284468	131271503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427
ENSMUSG00000026425.16_131271560_131284521_1	chr1	-	1275	5	ISM	ENSMUSG00000026425.16	ENST00000605551.2	1007	7	168221	-520	168221	437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCCTTTTAGATGAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	131284521	131271559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427
ENSMUSG00000026425.16_131271707_131291802_1	chr1	-	1313	6	ISM	ENSMUSG00000026425.16	ENST00000605551.2	1007	7	160940	-373	160940	290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGATTTGAATACATTA	NA	NA	NA	NA	NA	NA	NA	NA	131291802	131271706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739
ENSMUSG00000026425.16_131271841_131339618_1	chr1	-	1260	7	ISM	ENSMUSG00000026425.16	ENST00000612199.4	3075	10	113716	1050	113124	156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACCAGCTAGTATAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	131339618	131271840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537
ENSMUSG00000026425.16_131271995_131453102_1	chr1	-	1452	7	FSM	ENSMUSG00000026425.16	ENST00000619678.1	1450	7	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGCTTTAAATGCACAAG	NA	NA	NA	NA	NA	NA	NA	NA	131453102	131271994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131452675
ENSMUSG00000026425.16_131277292_131453054_1	chr1	-	1266	7	ISM	ENSMUSG00000026425.16	ENST00000612199.4	3075	10	280	6501	48	-5212	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTAGATGCCACCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	131453054	131277291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675
ENSMUSG00000026425.16_131277347_131453140_1	chr1	-	1297	7	ISM	ENSMUSG00000026425.16	ENST00000612199.4	3075	10	194	6556	-38	-5267	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTGGAACAGTCAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	131453140	131277346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675
ENSMUSG00000026425.16_131284472_131455085_1	chr1	-	1362	6	ISM	ENSMUSG00000026425.16	ENST00000367123.8	3195	11	8	13681	0	-12392	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGGAGGAGCTCAGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	131455085	131284471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ENSMUSG00000026425.16_131284524_131455085_1	chr1	-	1310	6	ISM	ENSMUSG00000026425.16	ENST00000367123.8	3195	11	8	13733	0	-12444	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTCGCTCCCCTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	131455085	131284523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ENSMUSG00000026426.11_135074734_135084007_1	chr1	+	1541	7	FSM	ENSMUSG00000026426.11	ENSMUST00000027684.11	1713	7	172	0	172	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGTGTATGGTGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	135074733	135084007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_135074839_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
ENSMUSG00000026427.17_131080918_131094159_1	chr1	+	1538	12	ISM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	0	5817	0	-5817	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACAGGGACCAGGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	131080917	131094159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063
ENSMUSG00000026427.17_131081025_131095871_1	chr1	+	1446	13	ISM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	107	4105	107	-4105	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCCTGCCTACCAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	131081024	131095871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856
ENSMUSG00000026427.17_131081090_131095914_1	chr1	+	1424	13	ISM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	172	4062	172	-4062	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGAAAGGGAAACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	131081089	131095914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856
ENSMUSG00000026427.17_131081147_131095977_1	chr1	+	1430	13	ISM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	229	3999	229	-3999	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTTAAAGTCTACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	131081146	131095977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856
ENSMUSG00000026427.17_131081998_131098728_1	chr1	+	1437	13	ISM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	1080	1248	1080	-1248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCTCCAGCAGCGATGT	NA	NA	NA	NA	NA	NA	NA	NA	131081997	131098728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673
ENSMUSG00000026427.17_131082070_131098758_1	chr1	+	1395	13	ISM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	1152	1218	1152	-1218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCGTCTCTCCTGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	131082069	131098758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673
ENSMUSG00000026427.17_131082111_131098818_1	chr1	+	1414	13	ISM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	1193	1158	1193	-1158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCCACCACCTTGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	131082110	131098818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673
ENSMUSG00000026427.17_131082901_131101088_1	chr1	+	1450	13	ISM	ENSMUSG00000026427.17	ENSMUST00000068805.14	2009	15	1983	127	1983	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACCTGGCAAGAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	131082900	131101088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ENSMUSG00000026427.17_131083367_131101215_1	chr1	+	1492	12	ISM	ENSMUSG00000026427.17	ENSMUST00000068805.14	2009	15	2449	0	2449	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTATTTCTAATCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	131083366	131101215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ENSMUSG00000026429.10_134890356_134899700_1	chr1	+	583	5	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	53	-2198	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCCAATCCTGATGACC	NA	NA	NA	NA	NA	NA	NA	NA	134890355	134899700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_134890525_134895464_134895641_134896978_134897049_134898987_134899094_134899638
ENSMUSG00000026429.10_134890494_134899900_1	chr1	+	539	6	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	191	-1998	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGCTCATGCAAGACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	134890493	134899900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_134890525_134895464_134895641_134896978_134897049_134898987_134899094_134899638_134899738_134899843
ENSMUSG00000026429.10_134895520_134901631_1	chr1	+	574	6	NNC	ENSMUSG00000026429.10	novel	657	6	NA	NA	-1459	-267	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAAAAGTTTTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	134895519	134901631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_134895641_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
ENSMUSG00000026429.10_134895593_134901670_1	chr1	+	540	6	NNC	ENSMUSG00000026429.10	novel	657	6	NA	NA	-1386	-228	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCCCTCTTAGTTACGG	NA	NA	NA	NA	NA	NA	NA	NA	134895592	134901670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_134895641_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
ENSMUSG00000026429.10_134897027_134901774_1	chr1	+	548	5	ISM	ENSMUSG00000026429.10	ENST00000646651.1	657	6	48	124	48	-124	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACCTTGTATGTTTACG	NA	NA	NA	NA	NA	NA	NA	NA	134897026	134901774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
ENSMUSG00000026429.10_134899694_134901900_1	chr1	+	428	4	ISM	ENSMUSG00000026429.10	ENST00000646651.1	657	6	2715	-2	2715	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	NA	NA	NA	NA	NA	NA	NA	134899693	134901900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134899738_134899843_134899928_134901537_134901764_134901826
ENSMUSG00000026434.13_131855879_131859823_1	chr1	+	1278	3	ISM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	17585	4236	17585	-594	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTGATAACGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	131855878	131859823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_131855955_131857350_131857501_131858771
ENSMUSG00000026434.13_131857375_131859930_1	chr1	+	1285	2	ISM	ENSMUSG00000026434.13	ENSMUST00000189946.7	2375	7	19103	487	19081	-487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTCCTGTTTTTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	131857374	131859930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_131857501_131858771
ENSMUSG00000026442.15_132497782_132504094_1	chr1	-	749	3	ISM	ENSMUSG00000026442.15	ENST00000513543.6	4106	26	89233	19	89231	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCATCTTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	132504094	132497781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132498390_132501507_132501578_132504023
ENSMUSG00000026442.15_132497899_132510791_1	chr1	-	752	4	ISM	ENSMUSG00000026442.15	ENST00000401399.5	6372	28	82534	2195	82534	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACCCTGAGCGTCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	132510791	132497898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132498390_132501507_132501578_132504023_132504156_132510732
ENSMUSG00000026442.15_132498161_132515872_1	chr1	-	762	6	ISM	ENSMUSG00000026442.15	ENST00000401399.5	6372	28	77453	2457	77453	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGAGTATCCCAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	132515872	132498160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132498390_132501507_132501578_132504023_132504156_132510732_132510886_132512101_132512219_132515811
ENSMUSG00000026442.15_132498300_132515996_1	chr1	-	747	6	ISM	ENSMUSG00000026442.15	ENST00000401399.5	6372	28	77329	2596	77329	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGAAGGCGGCGAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	132515996	132498299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132498390_132501507_132501578_132504023_132504156_132510732_132510886_132512101_132512219_132515811
ENSMUSG00000026442.15_132501529_132523273_1	chr1	-	751	6	ISM	ENSMUSG00000026442.15	ENST00000401399.5	6372	28	70052	5825	70052	-3457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGCTCATTTGACTACA	NA	NA	NA	NA	NA	NA	NA	NA	132523273	132501528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132501578_132504023_132504156_132510732_132510886_132512101_132512219_132515811_132516049_132523210
ENSMUSG00000026442.15_132504062_132523395_1	chr1	-	786	5	ISM	ENSMUSG00000026442.15	ENST00000401399.5	6372	28	69930	8358	69930	-5990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTCATCAAGAGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	132523395	132504061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132504156_132510732_132510886_132512101_132512219_132515811_132516049_132523210
ENSMUSG00000026442.15_132510733_132524386_1	chr1	-	815	5	ISM	ENSMUSG00000026442.15	ENST00000401399.5	6372	28	68939	15029	68939	-12661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAGGGGATCTGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	132524386	132510732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132510886_132512101_132512219_132515811_132516049_132523210_132523396_132524263
ENSMUSG00000026442.15_132510851_132529761_1	chr1	-	750	6	ISM	ENSMUSG00000026442.15	ENST00000401399.5	6372	28	63564	15147	63564	-12779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCCCAGCCTATACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	132529761	132510850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132510886_132512101_132512219_132515811_132516049_132523210_132523396_132524263_132524387_132529708
ENSMUSG00000026442.15_132512196_132529896_1	chr1	-	756	5	ISM	ENSMUSG00000026442.15	ENST00000401399.5	6372	28	63429	16492	63429	-14124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTCACAGTGCTCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	132529896	132512195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132512219_132515811_132516049_132523210_132523396_132524263_132524387_132529708
ENSMUSG00000026442.15_132515879_132531583_1	chr1	-	749	5	ISM	ENSMUSG00000026442.15	ENST00000401399.5	6372	28	61742	20175	61742	11694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCACCACCACCACTAC	NA	NA	NA	NA	NA	NA	NA	NA	132531583	132515878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132516049_132523210_132523396_132524263_132524387_132529708_132529932_132531535
ENSMUSG00000026442.15_132515989_132532897_1	chr1	-	781	6	ISM	ENSMUSG00000026442.15	ENST00000401399.5	6372	28	60428	20285	60428	11584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGCCCTTGCTGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	132532897	132515988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132516049_132523210_132523396_132524263_132524387_132529708_132529932_132531535_132531607_132532778
ENSMUSG00000026442.15_132523326_132533286_1	chr1	-	750	6	ISM	ENSMUSG00000026442.15	ENST00000401399.5	6372	28	60039	27622	60039	4247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCAGACCCAGTGTCGC	NA	NA	NA	NA	NA	NA	NA	NA	132533286	132523325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132523396_132524263_132524387_132529708_132529932_132531535_132531607_132532778_132532977_132533221
ENSMUSG00000026442.15_132524333_132536183_1	chr1	-	756	7	ISM	ENSMUSG00000026442.15	ENST00000401399.5	6372	28	57142	28629	57142	3240	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAGTGGGACCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	132536183	132524332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132524387_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120
ENSMUSG00000026442.15_132547118_132562449_1	chr1	-	820	6	ISM	ENSMUSG00000026442.15	ENST00000401399.5	6372	28	30876	51414	30876	-19545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGTCCCACTCCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	132562449	132547117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361
ENSMUSG00000026442.15_132548755_132564829_1	chr1	-	802	6	ISM	ENSMUSG00000026442.15	ENST00000401399.5	6372	28	28496	53051	28496	-21182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTCTCTGAAGAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	132564829	132548754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723
ENSMUSG00000026450.15_134070978_134079884_2	chr1	+	2050	10	NNC	ENSMUSG00000026450.15	novel	2051	10	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1046	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGCGTGTGCCCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	134070977	134079884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_134071180_134071748_134071806_134072989_134073156_134073328_134073454_134074299_134074424_134076073_134076260_134077113_134077222_134078216_134078344_134078841_134079317_134079404
ENSMUSG00000026450.15_134070978_134079884_5	chr1	+	2051	10	FSM	ENSMUSG00000026450.15	ENST00000367229.6	2051	10	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGCGTGTGCCCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	134070977	134079884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_134071180_134071748_134071806_134072989_134073156_134073328_134073454_134074299_134074424_134076073_134076260_134077113_134077222_134078216_134078344_134078841_134079317_134079403
ENSMUSG00000026450.15_134070978_134080112_1	chr1	+	2141	11	NNC	ENSMUSG00000026450.15	novel	2051	10	NA	NA	1	229	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAAGCAAGTAATATGTA	NA	NA	NA	NA	NA	NA	NA	NA	134070977	134080112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_134071180_134071748_134071806_134072989_134073156_134073328_134073454_134074299_134074424_134076073_134076260_134077113_134077222_134078216_134078344_134078841_134079317_134079403_134079892_134080029
ENSMUSG00000026456.19_134333733_134338963_1	chr1	+	1108	9	FSM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	214	515	214	-515	multi-exon	TRUE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATGGTGGATGCAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	134333732	134338963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
ENSMUSG00000026456.19_134334051_134339130_1	chr1	+	1216	8	ISM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	532	348	532	-348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGGTCACCTCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	134334050	134339130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
ENSMUSG00000026456.19_134334051_134339133_1	chr1	+	1219	8	ISM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	532	345	532	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTCACCTCTGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	134334050	134339133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
ENSMUSG00000026456.19_134334353_134339244_1	chr1	+	1164	7	ISM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	834	234	834	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTCCTACAGAAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	134334352	134339244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
ENSMUSG00000026456.19_134334393_134339316_1	chr1	+	1196	7	ISM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	874	162	874	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	134334392	134339316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
ENSMUSG00000026456.19_134334872_134339478_1	chr1	+	1253	6	ISM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	1353	0	1353	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTCGTCGTGTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	134334871	134339478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
ENSMUSG00000026457.15_134343116_134360046_1	chr1	+	2080	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	0	1043	0	-1040	multi-exon	FALSE	canonical	NA	NA	NA	NA	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGGTGATAATAAAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	134343115	134360046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ENSMUSG00000026457.15_134343302_134355895_1	chr1	+	1213	6	ISM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	108	5191	108	-5191	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGCCGCGGCTCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	134343301	134355895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819
ENSMUSG00000026457.15_134343302_134360197_1	chr1	+	2045	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	186	892	108	-889	multi-exon	FALSE	canonical	NA	NA	NA	NA	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTGTGGTCAGCGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	134343301	134360197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ENSMUSG00000026457.15_134343454_134355959_1	chr1	+	1125	6	ISM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	260	5127	260	-5127	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTGGGACCGGTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	134343453	134355959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819
ENSMUSG00000026457.15_134343612_134358915_1	chr1	+	1136	7	ISM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	418	2171	418	-2171	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATCACCGGCGCCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	134343611	134358915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794
ENSMUSG00000026457.15_134350810_134360378_1	chr1	+	2053	7	ISM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	7616	708	7616	-708	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAATACCAAGGAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	134350809	134360378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ENSMUSG00000026457.15_134351694_134360440_1	chr1	+	2033	6	ISM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	8500	646	8500	-646	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATAGTATTTTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	134351693	134360440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ENSMUSG00000026457.15_134351719_134360516_1	chr1	+	2084	6	ISM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	8525	570	8525	-570	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGCCTCAAACTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	134351718	134360516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ENSMUSG00000026457.15_134351784_134360552_1	chr1	+	2055	6	ISM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	8590	534	8590	-534	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCAAGTGTTGGGATTA	NA	NA	NA	NA	NA	NA	NA	NA	134351783	134360552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ENSMUSG00000026457.15_134352547_134360672_1	chr1	+	2088	5	ISM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	9353	414	9353	-414	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCATTCAGTTACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	134352546	134360672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ENSMUSG00000026457.15_134353732_134360835_1	chr1	+	2052	4	ISM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	10538	251	10538	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTAACCTCCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	134353731	134360835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134353834_134355819_134356008_134358794_134358989_134359267
ENSMUSG00000026457.15_134355895_134361089_1	chr1	+	2129	3	ISM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	12701	-3	12701	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTTGGTTCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	134355894	134361089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134356008_134358794_134358989_134359267
ENSMUSG00000026457.15_134355912_134361089_1	chr1	+	2112	3	ISM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	12718	-3	12718	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTTGGTTCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	134355911	134361089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134356008_134358794_134358989_134359267
ENSMUSG00000026458.14_134231469_134240320_1	chr1	-	434	5	ISM	ENSMUSG00000026458.14	ENST00000599966.5	2396	15	6848	5370	6848	-5370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTAAGGGACTATGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	134240320	134231468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273
ENSMUSG00000026458.14_134241419_134245617_1	chr1	-	449	5	ISM	ENSMUSG00000026458.14	ENST00000599966.5	2396	15	1551	15320	1551	-15320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCTAAGTTGGGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	134245617	134241418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545
ENSMUSG00000026458.14_134244429_134245733_1	chr1	-	446	4	ISM	ENSMUSG00000026458.14	ENST00000599966.5	2396	15	1435	18330	1435	-18330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCATTGGCCGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	134245733	134244428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134244517_134244800_134244935_134245175_134245212_134245545
ENSMUSG00000026458.14_134244865_134247034_1	chr1	-	429	4	ISM	ENSMUSG00000026458.14	ENST00000599966.5	2396	15	134	18766	134	-18766	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGGACGCTGCGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	134247034	134244864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134244935_134245175_134245212_134245545_134245787_134246952
ENSMUSG00000026459.6_134217727_134220286_1	chr1	+	1487	3	NNC	ENSMUSG00000026459.6	novel	1495	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1020	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATCTGCAATGATATTA	NA	NA	NA	NA	NA	NA	NA	NA	134217726	134220286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_134218265_134218838_134218913_134219411
ENSMUSG00000026470.15_155053600_155067267_1	chr1	+	251	3	ISM	ENSMUSG00000026470.15	ENSMUST00000195302.6	955	8	19106	6734	19106	-6734	internal_fragment	TRUE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTCATCGAGGAGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	155053599	155067267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_155053695_155063523_155063587_155067174
ENSMUSG00000026471.15_155006387_155012474_1	chr1	-	434	3	ISM	ENSMUSG00000026471.15	ENST00000617803.5	817	4	1046	0	1046	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACAAGGTGAGAGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	155012474	155006386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_155006478_155008105_155008295_155012320
ENSMUSG00000026471.15_155006387_155012474_2	chr1	-	239	2	NNC	ENSMUSG00000026471.15	novel	628	3	NA	NA	1046	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACAAGGTGAGAGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	155012474	155006386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_155006472_155012320
ENSMUSG00000026471.15_155006387_155012474_3	chr1	-	245	2	ISM	ENSMUSG00000026471.15	ENST00000282990.10	628	3	1046	0	1046	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACAAGGTGAGAGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	155012474	155006386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_155006478_155012320
ENSMUSG00000026471.15_155008106_155012600_1	chr1	-	469	2	ISM	ENSMUSG00000026471.15	ENST00000617803.5	817	4	920	1719	920	-1719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTATGGGGGTAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	155012600	155008105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_155008295_155012320
ENSMUSG00000026471.15_155008219_155013355_1	chr1	-	448	3	ISM	ENSMUSG00000026471.15	ENST00000617803.5	817	4	165	1832	165	-1832	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1560	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGGAACCTATCAAACGT	NA	NA	NA	NA	NA	NA	NA	NA	155013355	155008218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_155008295_155012320_155012597_155013259
ENSMUSG00000026471.15_155012422_155013342_1	chr1	-	258	2	ISM	ENSMUSG00000026471.15	ENST00000282990.10	628	3	178	6035	178	-6035	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCATGAGTTGCAATACC	NA	NA	NA	NA	NA	NA	NA	NA	155013342	155012421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_155012597_155013259
ENSMUSG00000026473.17_153775690_153784745_1	chr1	+	2068	7	FSM	ENSMUSG00000026473.17	ENSMUST00000086199.12	2792	7	0	724	0	-724	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTCCCTGCCCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	153775689	153784745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_153775806_153778679_153778859_153780282_153780445_153782094_153782242_153782765_153782894_153783031_153783232_153783609
ENSMUSG00000026473.17_153778813_153784995_1	chr1	+	2069	6	ISM	ENSMUSG00000026473.17	ENSMUST00000140685.4	1696	7	2482	-1067	2482	-474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAGCAAAACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	153778812	153784995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_153778859_153780282_153780445_153782094_153782242_153782765_153782894_153783031_153783232_153783609
ENSMUSG00000026473.17_153782164_153785275_1	chr1	+	2072	4	ISM	ENSMUSG00000026473.17	ENSMUST00000086199.12	2792	7	6474	194	5833	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGGGCCAACTGTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	153782163	153785275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_153782242_153782765_153782894_153783031_153783232_153783609
ENSMUSG00000026473.17_153782856_153785469_1	chr1	+	2098	3	ISM	ENSMUSG00000026473.17	ENSMUST00000086199.12	2792	7	7166	0	6525	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTATTTCATTCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	153782855	153785469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_153782894_153783031_153783232_153783609
ENSMUSG00000026475.8_153616607_153619658_1	chr1	+	621	4	ISM	ENSMUSG00000026475.8	ENSMUST00000027748.8	2339	5	512	1556	512	-1556	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGCCCTGTGTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	153616606	153619658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_153616720_153617365_153617428_153617708_153617876_153619379
ENSMUSG00000026484.14_151346471_151347430_1	chr1	-	740	2	ISM	ENSMUSG00000026484.14	ENSMUST00000186415.7	1106	6	29154	-402	6944	402	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAATTACTGTGCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	151347430	151346470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_151347169_151347388
ENSMUSG00000026484.14_151346562_151347510_1	chr1	-	729	2	ISM	ENSMUSG00000026484.14	ENSMUST00000186415.7	1106	6	29074	-311	6864	311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGACAATATGTATTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	151347510	151346561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_151347169_151347388
ENSMUSG00000026484.14_151346873_151349095_1	chr1	-	741	3	ISM	ENSMUSG00000026484.14	ENSMUST00000186415.7	1106	6	27489	0	5279	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCCACTCCCTCCATAG	NA	NA	NA	NA	NA	NA	NA	NA	151349095	151346872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_151347169_151347388_151347561_151348822
ENSMUSG00000026484.14_151347070_151351997_1	chr1	-	651	4	ISM	ENSMUSG00000026484.14	ENSMUST00000187048.7	3201	8	24565	1914	2377	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCTTTTAAAAGTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	151351997	151347069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890
ENSMUSG00000026484.14_151348923_151376545_1	chr1	-	715	5	ISM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	161	3766	17	-1471	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGCGATTGATCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	151376545	151348922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ENSMUSG00000026484.14_151348978_151352670_1	chr1	-	269	3	ISM	ENSMUSG00000026484.14	ENST00000511357.2	733	5	1704	1526	1704	-1526	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGGACCAAAACCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	151352670	151348977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_151349096_151351890_151351998_151352626
ENSMUSG00000026496.12_180396494_180417141_1	chr1	+	2029	13	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	0	11678	0	-10080	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGACTATGGCCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	180396493	180417141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962
ENSMUSG00000026496.12_180396623_180426592_1	chr1	+	2697	20	ISM	ENSMUSG00000026496.12	ENST00000413631.1	2838	21	24	629	24	-629	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGAGACCCGATTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	180396622	180426592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411460_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517
ENSMUSG00000026496.12_180396636_180418848_1	chr1	+	1970	14	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	142	9971	37	-8373	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGCTCGTGGGGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	180396635	180418848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782
ENSMUSG00000026496.12_180396682_180418911_1	chr1	+	1987	14	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	188	9908	83	-8310	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGTTGAGTGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	180396681	180418911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782
ENSMUSG00000026496.12_180401215_180427222_1	chr1	+	2716	20	NNC	ENSMUSG00000026496.12	novel	2838	21	NA	NA	4616	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1071	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCCTCCAGCCTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	180401214	180427222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411460_180413407_180413556_180414830_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157
ENSMUSG00000026496.12_180401303_180427222_2	chr1	+	2631	20	NNC	ENSMUSG00000026496.12	novel	2838	21	NA	NA	4704	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCCTCCAGCCTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	180401302	180427222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411460_180413407_180413556_180414825_180414967_180415487_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157
ENSMUSG00000026496.12_180401303_180427222_3	chr1	+	2633	20	ISM	ENSMUSG00000026496.12	ENST00000413631.1	2838	21	4704	-1	4704	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	910	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCCTCCAGCCTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	180401302	180427222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411460_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157
ENSMUSG00000026496.12_180401303_180427222_4	chr1	+	2629	20	NNC	ENSMUSG00000026496.12	novel	2838	21	NA	NA	4704	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCCTCCAGCCTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	180401302	180427222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411460_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426521_180426646_180427157
ENSMUSG00000026496.12_180406825_180424935_1	chr1	+	1979	15	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	10331	3884	10226	-2286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGGAAGTGATCGATGT	NA	NA	NA	NA	NA	NA	NA	NA	180406824	180424935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854
ENSMUSG00000026496.12_180408123_180425880_1	chr1	+	1968	15	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	11629	2939	11524	-1341	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCCTGTCGCAGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	180408122	180425880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775
ENSMUSG00000026496.12_180410353_180426635_1	chr1	+	2026	15	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	13859	2184	13754	-586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAACATGTGAGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	180410352	180426635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517
ENSMUSG00000026496.12_180411401_180427761_1	chr1	+	2006	16	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	14907	1058	14802	540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGTATAATGAGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	180411400	180427761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660
ENSMUSG00000026496.12_180413511_180428147_1	chr1	+	1979	16	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	17017	672	16912	-672	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTGCCTCTGCACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	180413510	180428147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ENSMUSG00000026496.12_180414910_180428267_1	chr1	+	1970	15	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	18416	552	18311	-552	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCTTGTCCATGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	180414909	180428267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ENSMUSG00000026496.12_180415539_180428369_1	chr1	+	1962	14	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	19045	450	18940	-450	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGATTTTGTTGTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	180415538	180428369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ENSMUSG00000026496.12_180415626_180428508_1	chr1	+	2014	14	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	19132	311	19027	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGCAAAATGTTAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	180415625	180428508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ENSMUSG00000026496.12_180416301_180428817_1	chr1	+	2068	12	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	19807	2	19702	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGTGTTGTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	180416300	180428817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ENSMUSG00000026500.7_178146695_178150258_1	chr1	+	464	4	NNC	ENSMUSG00000026500.7	novel	471	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTTTACATGAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	178146694	178150258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_178146774_178149309_178149418_178149506_178149571_178150045
ENSMUSG00000026502.14_178015231_178078632_1	chr1	+	2434	5	FSM	ENSMUSG00000026502.14	ENSMUST00000027783.14	8802	5	133	6235	-81	165	multi-exon	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTGGGGCAGAGCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	178015230	178078632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_178015524_178065477_178065551_178070177_178070272_178071906_178072049_178076800
ENSMUSG00000026502.14_178065488_178078956_1	chr1	+	2455	4	ISM	ENSMUSG00000026502.14	ENSMUST00000161075.8	2590	6	50505	-489	-18181	489	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTGCTTACCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	178065487	178078956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_178065551_178070177_178070272_178071906_178072049_178076800
ENSMUSG00000026504.18_176642226_176681418_1	chr1	+	1359	9	ISM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	0	166585	0	-8275	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCATGCTGTGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	176642225	176681418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_176642622_176652317_176652471_176653764_176653851_176656435_176656550_176658622_176658749_176667850_176667992_176672389_176672455_176672746_176672936_176681329
ENSMUSG00000026504.18_176642359_176695851_1	chr1	+	1350	10	ISM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	133	152152	133	6158	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCAAGAAAAGAGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	176642358	176695851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_176642622_176652317_176652471_176653764_176653851_176656435_176656550_176658622_176658749_176667850_176667992_176672389_176672455_176672746_176672936_176681329_176681469_176695777
ENSMUSG00000026504.18_176642437_176695874_1	chr1	+	1295	10	ISM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	211	152129	211	6181	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGGAGATGATAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	176642436	176695874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_176642622_176652317_176652471_176653764_176653851_176656435_176656550_176658622_176658749_176667850_176667992_176672389_176672455_176672746_176672936_176681329_176681469_176695777
ENSMUSG00000026504.18_176642557_176702169_1	chr1	+	1271	11	ISM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	331	145834	331	12476	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTGAAAAGGTCACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	176642556	176702169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_176642622_176652317_176652471_176653764_176653851_176656435_176656550_176658622_176658749_176667850_176667992_176672389_176672455_176672746_176672936_176681329_176681469_176695777_176695931_176702129
ENSMUSG00000026504.18_176652404_176705601_1	chr1	+	1261	11	ISM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	10178	142402	10178	15908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGATGAGGTGGAAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	176652403	176705601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_176652471_176653764_176653851_176656435_176656550_176658622_176658749_176667850_176667992_176672389_176672455_176672746_176672936_176681329_176681469_176695777_176695931_176702129_176702265_176705555
ENSMUSG00000026504.18_176652441_176705672_1	chr1	+	1295	11	ISM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	10215	142331	10215	15979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAAGCACGCTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	176652440	176705672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_176652471_176653764_176653851_176656435_176656550_176658622_176658749_176667850_176667992_176672389_176672455_176672746_176672936_176681329_176681469_176695777_176695931_176702129_176702265_176705555
ENSMUSG00000026504.18_176656508_176773687_1	chr1	+	1264	11	ISM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	14282	74316	14282	-74316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTCAGCAAAGCTTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	176656507	176773687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_176656550_176658622_176658749_176667850_176667992_176672389_176672455_176672746_176672936_176681329_176681469_176695777_176695931_176702129_176702265_176705555_176705673_176747109_176747253_176773673
ENSMUSG00000026504.18_176667945_176783397_1	chr1	+	1265	11	ISM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	25719	64606	25719	-64606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGACAAGCTAGAGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	176667944	176783397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_176667992_176672389_176672455_176672746_176672936_176681329_176681469_176695777_176695931_176702129_176702265_176705555_176705673_176747109_176747253_176773673_176773802_176775846_176775956_176783357
ENSMUSG00000026504.18_176672745_176839581_1	chr1	+	1374	10	ISM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	30519	8422	30519	-8422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGTGGGAACCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	176672744	176839581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_176672936_176681329_176681469_176695777_176695931_176702129_176702265_176705555_176705673_176747109_176747253_176773673_176773802_176775846_176775956_176783357_176783490_176839454
ENSMUSG00000026504.18_176681322_176847747_1	chr1	+	1258	10	ISM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	39096	256	39096	-256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATTTACATTCATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	176681321	176847747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_176681469_176695777_176695931_176702129_176702265_176705555_176705673_176747109_176747253_176773673_176773802_176775846_176775956_176783357_176783490_176839454_176839582_176847680
ENSMUSG00000026504.18_176681382_176847795_1	chr1	+	1246	10	ISM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	39156	208	39156	-208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTCCCCAGGGAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	176681381	176847795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_176681469_176695777_176695931_176702129_176702265_176705555_176705673_176747109_176747253_176773673_176773802_176775846_176775956_176783357_176783490_176839454_176839582_176847680
ENSMUSG00000026504.18_176681432_176847877_1	chr1	+	1278	10	ISM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	39206	126	39206	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCTTGCTTCAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	176681431	176847877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_176681469_176695777_176695931_176702129_176702265_176705555_176705673_176747109_176747253_176773673_176773802_176775846_176775956_176783357_176783490_176839454_176839582_176847680
ENSMUSG00000026504.18_176695807_176848003_1	chr1	+	1338	9	ISM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	53581	0	53581	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTTGTTCCGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	176695806	176848003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_176695931_176702129_176702265_176705555_176705673_176747109_176747253_176773673_176773802_176775846_176775956_176783357_176783490_176839454_176839582_176847680
ENSMUSG00000026509.16_182294825_182344824_1	chr1	-	2948	20	NIC	ENSMUSG00000026509.16	novel	3225	21	NA	NA	265	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	3194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGCACCATGCCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	182344824	182294824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_-_182295801_182297743_182297803_182298243_182298361_182300085_182300165_182300488_182300558_182301446_182301512_182304815_182304874_182306112_182306179_182307270_182307308_182309011_182309224_182311767_182311938_182314108_182314270_182315279_182315355_182316558_182316645_182317529_182317614_182318431_182318601_182319626_182319761_182320316_182320436_182339771_182339842_182344682
ENSMUSG00000026511.8_181952315_181959554_1	chr1	+	949	3	FSM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	0	418	0	70	multi-exon	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAGAGCGAGACGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	181952314	181959554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_181952541_181956248_181956318_181958900
ENSMUSG00000026511.8_181956247_181959670_1	chr1	+	841	2	ISM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	3932	302	3932	186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGCCTCAGACTGAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	181956246	181959670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_181956318_181958900
ENSMUSG00000026516.9_180922567_180941759_1	chr1	-	826	9	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	25116	19	25116	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	752	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATCCATATCAATAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	180941759	180922566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647
ENSMUSG00000026516.9_180924699_180941866_1	chr1	-	882	8	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	25009	2151	25009	-2151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	756	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTTCTCCAGGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	180941866	180924698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647
ENSMUSG00000026516.9_180926716_180945071_1	chr1	-	838	8	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	21804	4168	21804	-4168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTCGTTGTAATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	180945071	180926715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000
ENSMUSG00000026516.9_180929185_180945204_1	chr1	-	827	7	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	21671	6637	21671	-6637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGCGCCCAGGCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	180945204	180929184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000
ENSMUSG00000026516.9_180932688_180947948_1	chr1	-	835	7	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	18927	10140	18927	-10140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAGAAACACGCCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	180947948	180932687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919
ENSMUSG00000026516.9_180934425_180948064_1	chr1	-	902	6	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	18811	11877	18811	-11877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAACGAAGCCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	180948064	180934424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919
ENSMUSG00000026516.9_180936725_180951549_1	chr1	-	900	6	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	15326	14177	15326	-14177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCATGTGGCATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	180951549	180936724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431
ENSMUSG00000026516.9_180939852_180954604_1	chr1	-	940	6	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	12271	17304	12271	-17304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCACAAGTTCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	180954604	180939851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502
ENSMUSG00000026516.9_180941647_180957150_1	chr1	-	912	6	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	9725	19099	9725	-19099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTATACAGCTATCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	180957150	180941646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073
ENSMUSG00000026516.9_180941794_180958035_1	chr1	-	900	7	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	8840	19246	8840	-19246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGAATTGAACGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	180958035	180941793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958
ENSMUSG00000026516.9_180945023_180958356_1	chr1	-	859	7	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	8519	22475	8519	-22475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCCACTTCTGAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	180958356	180945022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302
ENSMUSG00000026516.9_180945235_180966686_1	chr1	-	835	9	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	189	22687	189	-22687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGAAAACTGAGGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	180966686	180945234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180964437_180964496_180966635
ENSMUSG00000026516.9_180947920_180966874_1	chr1	-	921	9	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	1	25372	1	-25372	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTCTTGTAGAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	180966874	180947919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180964437_180964496_180966635_180966733_180966818
ENSMUSG00000026516.9_180958349_180969938_1	chr1	-	343	5	ISM	ENSMUSG00000026516.9	ENST00000469075.5	2197	20	29	35801	29	-35801	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCAAGAAGTAGATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	180969938	180958348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180958436_180964437_180964496_180966635_180966733_180966818_180966872_180969890
ENSMUSG00000026519.17_180774236_180802048_1	chr1	+	2471	22	ISM	ENSMUSG00000026519.17	ENSMUST00000161523.8	3258	23	2636	620	2636	-620	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAACCGGGCTGAGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	180774235	180802048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ENSMUSG00000026519.17_180784014_180802532_1	chr1	+	2454	16	ISM	ENSMUSG00000026519.17	ENSMUST00000161523.8	3258	23	12414	136	12414	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTTTGTAGCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	180784013	180802532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ENSMUSG00000026520.9_180732023_180735203_1	chr1	+	741	6	NNC	ENSMUSG00000026520.9	novel	743	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGAGGACTCTGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	180732022	180735203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_180732096_180732308_180732380_180733438_180733619_180734159_180734253_180734354_180734519_180735043
ENSMUSG00000026520.9_180732023_180735203_2	chr1	+	743	6	FSM	ENSMUSG00000026520.9	ENST00000612039.4	743	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGAGGACTCTGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	180732022	180735203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_180732096_180732308_180732380_180733438_180733619_180734159_180734253_180734354_180734519_180735041
ENSMUSG00000026520.9_180732023_180735203_3	chr1	+	739	6	NNC	ENSMUSG00000026520.9	novel	743	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGAGGACTCTGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	180732022	180735203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_180732096_180732308_180732380_180733438_180733619_180734159_180734253_180734358_180734519_180735041
ENSMUSG00000026520.9_180732023_180735653_1	chr1	+	1408	7	NNC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1902	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTCTCACTGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	180732022	180735653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734246_180734354_180734519_180735041
ENSMUSG00000026520.9_180732023_180735653_2	chr1	+	1415	7	FSM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	165	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTCTCACTGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	180732022	180735653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
ENSMUSG00000026520.9_180732308_180735203_1	chr1	+	669	5	NNC	ENSMUSG00000026520.9	novel	743	6	NA	NA	285	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGAGGACTCTGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	180732307	180735203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_180732380_180733440_180733619_180734159_180734253_180734354_180734519_180735041
ENSMUSG00000026526.15_175428558_175431578_1	chr1	-	650	2	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	21623	618	21623	-618	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCAGGTTAGTTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	175431578	175428557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_175429133_175431503
ENSMUSG00000026526.15_175428606_175431634_1	chr1	-	658	2	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	21567	666	21567	-666	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCCTGTGTATGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	175431634	175428605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_175429133_175431503
ENSMUSG00000026526.15_175428707_175433662_1	chr1	-	622	3	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	19539	767	19539	-767	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACAGGCAACAGCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	175433662	175428706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_175429133_175431503_175431658_175433620
ENSMUSG00000026526.15_175428760_175433713_1	chr1	-	620	3	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	19488	820	19488	-820	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCTCCCACGAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	175433713	175428759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_175429133_175431503_175431658_175433620
ENSMUSG00000026526.15_175428824_175433748_1	chr1	-	591	3	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	19453	884	19453	-884	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGGGGTCCCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	175433748	175428823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_175429133_175431503_175431658_175433620
ENSMUSG00000026526.15_175428942_175435586_1	chr1	-	677	4	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	17615	1002	17615	-1002	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTTTAAAATTTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	175435586	175428941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382
ENSMUSG00000026526.15_175429064_175437368_1	chr1	-	721	5	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	15833	1124	15833	-1124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACTTGGCTATCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	175437368	175429063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382_175435587_175437202
ENSMUSG00000026526.15_175431531_175439750_1	chr1	-	663	5	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	13451	3591	13451	-3591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCACAGCTCTTAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	175439750	175431530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712
ENSMUSG00000026526.15_175431588_175439796_1	chr1	-	652	5	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	13405	3648	13405	-3648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGGGATCCAGGCCAACACA	NA	NA	NA	NA	NA	NA	NA	NA	175439796	175431587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712
ENSMUSG00000026526.15_175431613_175439876_1	chr1	-	707	5	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	13325	3673	13325	-3673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCCTTCACAGACAACTG	NA	NA	NA	NA	NA	NA	NA	NA	175439876	175431612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712
ENSMUSG00000026526.15_175433710_175442351_1	chr1	-	641	5	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	10850	5770	10850	-5770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGCCCAAGTCATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	175442351	175433709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_175433749_175435382_175435587_175437202_175437369_175439712_175439896_175442302
ENSMUSG00000026526.15_175435436_175442416_1	chr1	-	614	4	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	10785	7496	10785	-7496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGAGAGCTGATCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	175442416	175435435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_175435587_175437202_175437369_175439712_175439896_175442302
ENSMUSG00000026526.15_175435546_175444148_1	chr1	-	621	5	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	9053	7606	9053	-7606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTCATGATGCTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	175444148	175435545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_175435587_175437202_175437369_175439712_175439896_175442302_175442480_175444094
ENSMUSG00000026526.15_175437290_175446751_1	chr1	-	685	5	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	6450	9350	6450	-9350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGAGGCACTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	175446751	175437289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616
ENSMUSG00000026527.14_174886654_174907157_1	chr1	-	1065	4	ISM	ENSMUSG00000026527.14	ENST00000348120.6	1811	13	109634	0	109634	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTGGAACTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	174907157	174886653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_174887361_174903582_174903664_174905754_174905845_174906970
ENSMUSG00000026527.14_174886654_174907159_1	chr1	-	1062	4	NNC	ENSMUSG00000026527.14	novel	1811	13	NA	NA	109632	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTGGAACTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	174907159	174886653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_174887361_174903582_174903659_174905754_174905845_174906970
ENSMUSG00000026527.14_174886654_174911663_1	chr1	-	1191	5	ISM	ENSMUSG00000026527.14	ENST00000348120.6	1811	13	105128	0	105128	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTGGAACTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	174911663	174886653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_174887361_174903582_174903664_174905754_174905845_174906970_174907158_174911537
ENSMUSG00000026527.14_174886654_175016791_1	chr1	-	2024	16	FSM	ENSMUSG00000026527.14	ENST00000440928.6	2024	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTGGAACTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	175016791	174886653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_174887361_174903582_174903664_174904389_174904444_174905754_174905845_174906970_174907158_174911537_174911664_174913681_174913793_174916984_174917047_174918559_174918659_174921369_174921445_174949293_174949376_174949460_174949538_174950496_174950562_174977217_174977270_174980689_174980797_175016742
ENSMUSG00000026527.14_174886783_174913686_1	chr1	-	1067	6	ISM	ENSMUSG00000026527.14	ENST00000348120.6	1811	13	103105	129	103105	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTTATACCATATTT	NA	NA	NA	NA	NA	NA	NA	NA	174913686	174886782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_174887361_174903582_174903664_174905754_174905845_174906970_174907158_174911537_174911664_174913681
ENSMUSG00000026527.14_174886919_174917049_1	chr1	-	1097	7	NNC	ENSMUSG00000026527.14	novel	1811	13	NA	NA	99742	-136	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTACACACATGGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	174917049	174886918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_174887361_174903582_174903664_174905754_174905845_174906970_174907158_174911537_174911659_174913681_174913793_174916984
ENSMUSG00000026527.14_174886984_174921391_1	chr1	-	1155	9	ISM	ENSMUSG00000026527.14	ENST00000348120.6	1811	13	95400	330	95400	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACTGAAAATTCAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	174921391	174886983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_174887361_174903582_174903664_174905754_174905845_174906970_174907158_174911537_174911664_174913681_174913793_174916984_174917047_174918559_174918659_174921369
ENSMUSG00000026527.14_174887008_174918634_1	chr1	-	1085	8	ISM	ENSMUSG00000026527.14	ENST00000348120.6	1811	13	98157	354	98157	-225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCTTCTGCTAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	174918634	174887007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_174887361_174903582_174903664_174905754_174905845_174906970_174907158_174911537_174911664_174913681_174913793_174916984_174917047_174918559
ENSMUSG00000026527.14_174887113_174921425_1	chr1	-	1060	9	ISM	ENSMUSG00000026527.14	ENST00000348120.6	1811	13	95366	459	95366	189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTCTGCTTCCCTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	174921425	174887112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_174887361_174903582_174903664_174905754_174905845_174906970_174907158_174911537_174911664_174913681_174913793_174916984_174917047_174918559_174918659_174921369
ENSMUSG00000026527.14_174887303_174950561_1	chr1	-	1113	12	ISM	ENSMUSG00000026527.14	ENST00000348120.6	1811	13	66230	649	66230	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTCACATGAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	174950561	174887302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_174887361_174903582_174903664_174905754_174905845_174906970_174907158_174911537_174911664_174913681_174913793_174916984_174917047_174918559_174918659_174921369_174921445_174949293_174949376_174949460_174949538_174950496
ENSMUSG00000026527.14_174903582_175016791_1	chr1	-	1105	12	ISM	ENSMUSG00000026527.14	ENST00000348120.6	1811	13	0	16928	0	-16280	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGAATCTTGGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	175016791	174903581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_174903664_174905754_174905845_174906970_174907158_174911537_174911664_174913681_174913793_174916984_174917047_174918559_174918659_174921369_174921445_174949293_174949376_174949460_174949538_174950496_174950562_175016742
ENSMUSG00000026535.10_173790134_173799017_1	chr1	-	544	3	ISM	ENSMUSG00000026535.10	ENSMUST00000000266.9	1697	7	11293	0	11293	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGTTATTTATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	173799017	173790133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173790390_173791359_173791549_173798918
ENSMUSG00000026535.10_173790134_173799071_1	chr1	-	598	3	ISM	ENSMUSG00000026535.10	ENSMUST00000000266.9	1697	7	11239	0	11239	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGTTATTTATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	173799071	173790133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173790390_173791359_173791549_173798918
ENSMUSG00000026535.10_173790257_173799130_1	chr1	-	534	3	ISM	ENSMUSG00000026535.10	ENSMUST00000000266.9	1697	7	11180	123	11180	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCTTAGTTGTGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	173799130	173790256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173790390_173791359_173791549_173798918
ENSMUSG00000026535.10_173791395_173799781_1	chr1	-	584	3	ISM	ENSMUSG00000026535.10	ENSMUST00000000266.9	1697	7	10529	1261	10529	-1261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCTGAGATCTACGAGG	NA	NA	NA	NA	NA	NA	NA	NA	173799781	173791394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173791549_173798918_173799324_173799756
ENSMUSG00000026535.10_173791498_173799826_1	chr1	-	526	3	ISM	ENSMUSG00000026535.10	ENSMUST00000000266.9	1697	7	10484	1364	10484	-1364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGAAAGTGGTGGTATC	NA	NA	NA	NA	NA	NA	NA	NA	173799826	173791497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173791549_173798918_173799324_173799756
ENSMUSG00000026535.10_173798919_173799947_1	chr1	-	596	2	ISM	ENSMUSG00000026535.10	ENSMUST00000000266.9	1697	7	10363	8785	10363	-8785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCTATTTTGTAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	173799947	173798918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173799324_173799756
ENSMUSG00000026535.10_173799086_173802393_1	chr1	-	522	3	ISM	ENSMUSG00000026535.10	ENSMUST00000000266.9	1697	7	7917	8952	7917	-8952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGTCTCTGGCAATACAT	NA	NA	NA	NA	NA	NA	NA	NA	173802393	173799085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173799324_173799756_173799946_173802298
ENSMUSG00000026535.10_173799139_173802450_1	chr1	-	526	3	ISM	ENSMUSG00000026535.10	ENSMUST00000000266.9	1697	7	7860	9005	7860	-9005	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGTTTATCCCGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	173802450	173799138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173799324_173799756_173799946_173802298
ENSMUSG00000026535.10_173799223_173802556_1	chr1	-	548	3	ISM	ENSMUSG00000026535.10	ENSMUST00000000266.9	1697	7	7754	9089	7754	-9089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAAAAGTAAAAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	173802556	173799222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173799324_173799756_173799946_173802298
ENSMUSG00000026535.10_173799903_173804895_1	chr1	-	522	3	ISM	ENSMUSG00000026535.10	ENSMUST00000000266.9	1697	7	5415	9769	5415	-9769	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAGATAATATAAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	173804895	173799902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173799946_173802298_173802713_173804830
ENSMUSG00000026535.10_173802299_173805004_1	chr1	-	588	2	ISM	ENSMUSG00000026535.10	ENSMUST00000000266.9	1697	7	5306	12165	5306	-12165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGTGTGAAAACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	173805004	173802298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173802713_173804830
ENSMUSG00000026535.10_173802401_173810310_1	chr1	-	556	3	ISM	ENSMUSG00000026535.10	ENSMUST00000000266.9	1697	7	0	12267	0	-12267	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAAAAATATTATCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	173810310	173802400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173802713_173804830_173805004_173810239
ENSMUSG00000026546.17_172355442_172366070_1	chr1	+	834	7	ISM	ENSMUSG00000026546.17	ENSMUST00000085894.12	1908	12	6831	7367	86	-7353	internal_fragment	TRUE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAAGATGCAAGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	172355441	172366070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172355483_172357376_172357520_172359647_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045
ENSMUSG00000026546.17_172357375_172366192_1	chr1	+	917	6	ISM	ENSMUSG00000026546.17	ENSMUST00000085894.12	1908	12	8764	7245	2019	-7231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGACTTGGTGTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	172357374	172366192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172357520_172359647_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045
ENSMUSG00000026546.17_172357456_172368133_1	chr1	+	916	7	ISM	ENSMUSG00000026546.17	ENSMUST00000085894.12	1908	12	8845	5304	2100	-5290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGAGAAGGCGCAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	172357455	172368133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172357520_172359647_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053
ENSMUSG00000026546.17_172359650_172368778_1	chr1	+	911	7	ISM	ENSMUSG00000026546.17	ENSMUST00000085894.12	1908	12	11039	4659	4294	-4645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTGCAGATCGAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	172359649	172368778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751
ENSMUSG00000026546.17_172359741_172368796_1	chr1	+	838	7	ISM	ENSMUSG00000026546.17	ENSMUST00000085894.12	1908	12	11130	4641	4385	-4627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCGTCGAAAGGAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	172359740	172368796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751
ENSMUSG00000026546.17_172360097_172368945_1	chr1	+	936	6	ISM	ENSMUSG00000026546.17	ENSMUST00000085894.12	1908	12	11486	4492	4741	-4478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAGATGCCGAGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	172360096	172368945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751
ENSMUSG00000026546.17_172360221_172372690_1	chr1	+	844	7	ISM	ENSMUSG00000026546.17	ENSMUST00000085894.12	1908	12	11610	747	4865	-733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAACAGGAGAAGAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	172360220	172372690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751_172368946_172372658
ENSMUSG00000026546.17_172361619_172372833_1	chr1	+	833	6	ISM	ENSMUSG00000026546.17	ENSMUST00000085894.12	1908	12	13008	604	6263	-590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCGCGAGCGCATCGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	172361618	172372833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751_172368946_172372658
ENSMUSG00000026546.17_172362813_172373335_1	chr1	+	869	6	ISM	ENSMUSG00000026546.17	ENST00000368099.9	1761	11	7457	88	7457	-88	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGGAGAGCACGGAT	NA	NA	NA	NA	NA	NA	NA	NA	172362812	172373335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172362908_172366045_172366193_172368053_172368168_172368751_172368946_172372658_172372884_172373241
ENSMUSG00000026546.17_172366042_172373437_1	chr1	+	880	5	ISM	ENSMUSG00000026546.17	ENST00000368099.9	1761	11	10686	-14	10686	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGCTCCACTTCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	172366041	172373437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172366193_172368053_172368168_172368751_172368946_172372658_172372884_172373241
ENSMUSG00000026547.16_172327614_172333855_1	chr1	+	772	4	ISM	ENSMUSG00000026547.16	ENSMUST00000111230.8	1586	5	0	1092	0	-416	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTCTGTGGGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	172327613	172333855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752
ENSMUSG00000026547.16_172327812_172334300_1	chr1	+	741	5	FSM	ENSMUSG00000026547.16	ENSMUST00000111230.8	1586	5	198	647	198	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATGAATGGTTAATATA	NA	NA	NA	NA	NA	NA	NA	NA	172327811	172334300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133
ENSMUSG00000026547.16_172327812_172334300_2	chr1	+	736	5	NNC	ENSMUSG00000026547.16	novel	1586	5	NA	NA	198	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATGAATGGTTAATATA	NA	NA	NA	NA	NA	NA	NA	NA	172327811	172334300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_172327900_172332686_172332895_172333327_172333503_172333757_172333856_172334133
ENSMUSG00000026547.16_172332741_172334300_1	chr1	+	598	4	NNC	ENSMUSG00000026547.16	novel	600	4	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATGAATGGTTAATATA	NA	NA	NA	NA	NA	NA	NA	NA	172332740	172334300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_172332899_172333327_172333503_172333757_172333856_172334133
ENSMUSG00000026547.16_172333355_172334635_1	chr1	+	753	3	ISM	ENSMUSG00000026547.16	ENST00000524097.1	600	4	640	-364	640	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCCCATGGCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	172333354	172334635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172333503_172333752_172333856_172334133
ENSMUSG00000026547.16_172333383_172334641_1	chr1	+	726	3	NNC	ENSMUSG00000026547.16	novel	600	4	NA	NA	668	-306	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATGGCCTGATGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	172333382	172334641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_172333503_172333757_172333856_172334133
ENSMUSG00000026547.16_172333790_172334790_1	chr1	+	723	2	ISM	ENSMUSG00000026547.16	ENST00000524097.1	600	4	1075	-519	1075	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGCAGAGGCTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	172333789	172334790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172333856_172334133
ENSMUSG00000026553.18_171910372_171929081_1	chr1	+	947	9	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	-86	20267	-27	-20267	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGAATTATTTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	171910371	171929081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945
ENSMUSG00000026553.18_171915165_171931730_1	chr1	+	894	10	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	4707	17618	4707	-17618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATGGTAACATGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	171915164	171931730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675
ENSMUSG00000026553.18_171919811_171935961_1	chr1	+	917	9	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	9353	13387	9353	-13387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGGAAACTAATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	171919810	171935961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878
ENSMUSG00000026553.18_171925240_171937492_1	chr1	+	947	9	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	14782	11856	14782	-11856	internal_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACATGACTGATGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	171925239	171937492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352
ENSMUSG00000026553.18_171927303_171938141_1	chr1	+	854	9	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	16845	11207	16845	-11207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGCTTCATCATATCCA	NA	NA	NA	NA	NA	NA	NA	NA	171927302	171938141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055
ENSMUSG00000026553.18_171928991_171938322_1	chr1	+	856	9	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	18533	11026	18533	-11026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTGGGGTGTTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	171928990	171938322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243
ENSMUSG00000026553.18_171933689_171940624_1	chr1	+	861	8	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	23231	8724	23231	-8724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAACTGCTGGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	171933688	171940624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592
ENSMUSG00000026553.18_171935878_171940782_1	chr1	+	949	7	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	25420	8566	25420	-8566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTCTCTAAACTATGG	NA	NA	NA	NA	NA	NA	NA	NA	171935877	171940782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592
ENSMUSG00000026553.18_171938243_171942718_1	chr1	+	954	7	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	27785	6630	27785	-6630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCATTCCTCTTAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	171938242	171942718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589
ENSMUSG00000026553.18_171939513_171944793_1	chr1	+	858	8	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	29055	4555	29055	-4555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGGAAAGGGACAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	171939512	171944793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753
ENSMUSG00000026553.18_171939758_171942358_1	chr1	+	413	4	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	29300	6990	29300	-6990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGAGCCTGAAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	171939757	171942358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171939838_171940592_171940783_171940900_171940997_171942311
ENSMUSG00000026553.18_171939758_171945659_1	chr1	+	857	8	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	29300	3689	29300	-3689	internal_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGCAGGAAAACACAATT	NA	NA	NA	NA	NA	NA	NA	NA	171939757	171945659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581
ENSMUSG00000026553.18_171940612_171946440_1	chr1	+	860	9	ISM	ENSMUSG00000026553.18	ENSMUST00000027833.12	4351	33	30213	3457	30154	-2908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCCTATAAGCAACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	171940611	171946440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407
ENSMUSG00000026553.18_171940674_171946500_1	chr1	+	858	9	ISM	ENSMUSG00000026553.18	ENSMUST00000027833.12	4351	33	30275	3397	30216	-2848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCTGCTTGCCCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	171940673	171946500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407
ENSMUSG00000026553.18_171940916_171946916_1	chr1	+	941	9	ISM	ENSMUSG00000026553.18	ENSMUST00000027833.12	4351	33	30517	2981	30458	-2432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAATAAACAGGAGATTGC	NA	NA	NA	NA	NA	NA	NA	NA	171940915	171946916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753
ENSMUSG00000026553.18_171942312_171944869_1	chr1	+	419	4	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	31854	4479	31854	-4479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTCCTGCTCTGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	171942311	171944869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171942401_171942589_171942714_171944492_171944583_171944753
ENSMUSG00000026553.18_171944492_171946545_1	chr1	+	426	5	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	34034	2803	34034	-2803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCCCCTTGCTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	171944491	171946545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946467
ENSMUSG00000026553.18_171944492_171947605_1	chr1	+	945	8	ISM	ENSMUSG00000026553.18	ENSMUST00000027833.12	4351	33	34093	2292	34034	-1743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGGGGAATTCCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	171944491	171947605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443
ENSMUSG00000026553.18_171944789_171948856_1	chr1	+	879	8	ISM	ENSMUSG00000026553.18	ENSMUST00000027833.12	4351	33	34390	1041	34331	-492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGCACAACCCCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	171944788	171948856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796
ENSMUSG00000026553.18_171944841_171946916_1	chr1	+	410	5	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	34383	2432	34383	-2432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAATAAACAGGAGATTGC	NA	NA	NA	NA	NA	NA	NA	NA	171944840	171946916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171944864_171945581_171945660_171945819_171945889_171946467_171946545_171946753
ENSMUSG00000026553.18_171945835_171947104_1	chr1	+	398	4	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	35377	2244	35377	-2244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCTAGACCAGCAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	171945834	171947104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171945889_171946467_171946545_171946753_171946941_171947024
ENSMUSG00000026553.18_171946796_171949505_1	chr1	+	852	5	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	36338	-157	36338	157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTGATCATAGATG	NA	NA	NA	NA	NA	NA	NA	NA	171946795	171949505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ENSMUSG00000026553.18_171946859_171949569_1	chr1	+	853	5	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	36401	-221	36401	221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGGCCATTTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	171946858	171949569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ENSMUSG00000026553.18_171946910_171949620_1	chr1	+	853	5	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	36452	-272	36452	272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTTCCTGTCAATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	171946909	171949620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ENSMUSG00000026553.18_171948795_171949897_1	chr1	+	828	2	ISM	ENSMUSG00000026553.18	ENSMUST00000027833.12	4351	33	38396	0	38337	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGCCGTTTCCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	171948794	171949897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171948992_171949266
ENSMUSG00000026554.16_171975745_172023033_1	chr1	+	2823	14	FSM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	36	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	171975744	172023033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ENSMUSG00000026558.14_167053677_167055349_1	chr1	-	463	2	ISM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	57540	3225	57540	-3225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACATACATACGTCTATAT	NA	NA	NA	NA	NA	NA	NA	NA	167055349	167053676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_167054091_167055300
ENSMUSG00000026558.14_167053796_167057559_1	chr1	-	442	3	ISM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	55330	3344	55330	-3344	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTACTTTGGAACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	167057559	167053795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_167054091_167055300_167055350_167057461
ENSMUSG00000026558.14_167062261_167112447_1	chr1	-	503	4	ISM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	442	11809	442	-11809	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTTCTGTAAGCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	167112447	167062260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_167062404_167064171_167064269_167065057_167065218_167112344
ENSMUSG00000026558.14_167064202_167112602_1	chr1	-	485	3	ISM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	287	13750	287	-13750	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGTGTACGACTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	167112602	167064201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_167064269_167065057_167065218_167112344
ENSMUSG00000026558.14_167065173_167112769_1	chr1	-	470	2	ISM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	120	14721	120	-14721	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGATTACCACCAGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	167112769	167065172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_167065218_167112344
ENSMUSG00000026563.14_166206908_166220154_1	chr1	+	937	8	FSM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	242	1036	242	-1036	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACACATACTGTGTATGC	NA	NA	NA	NA	NA	NA	NA	NA	166206907	166220154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_166207046_166209695_166209788_166209965_166210032_166214234_166214333_166216130_166216341_166217404_166217557_166219391_166219555_166220136
ENSMUSG00000026563.14_166209738_166220224_1	chr1	+	827	7	ISM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	3072	966	3072	-966	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTACAACAAGACAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	166209737	166220224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_166209788_166209965_166210032_166214234_166214333_166216130_166216341_166217404_166217557_166219391_166219555_166220136
ENSMUSG00000026563.14_166209965_166220356_1	chr1	+	910	6	ISM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	3299	834	3299	-834	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACATTTCAAAACTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	166209964	166220356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_166210032_166214234_166214333_166216130_166216341_166217404_166217557_166219391_166219555_166220136
ENSMUSG00000026563.14_166216207_166220526_1	chr1	+	839	4	ISM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	9541	664	9541	-664	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAAGACACCTGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	166216206	166220526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_166216341_166217404_166217557_166219391_166219555_166220136
ENSMUSG00000026563.14_166217434_166220692_1	chr1	+	842	3	ISM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	10768	498	10768	-498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCATATTGGTGGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	166217433	166220692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_166217557_166219391_166219555_166220136
ENSMUSG00000026563.14_166219419_166220866_1	chr1	+	866	2	ISM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	12753	324	12753	-324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAACTTCCTTGTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	166219418	166220866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_166219555_166220136
ENSMUSG00000026563.14_166219501_166220927_1	chr1	+	845	2	ISM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	12835	263	12835	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTACAAACTAATTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	166219500	166220927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_166219555_166220136
ENSMUSG00000026566.16_165420617_165429407_1	chr1	-	719	2	ISM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	32691	808	7708	362	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATATGAGGGAATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	165429407	165420616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_165421247_165429318
ENSMUSG00000026566.16_165420726_165432235_1	chr1	-	684	3	ISM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	29863	917	4880	253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCACAGTATCAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	165432235	165420725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_165421247_165429318_165429425_165432178
ENSMUSG00000026566.16_165420784_165432285_1	chr1	-	676	3	ISM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	29813	975	4830	195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAACCAGTCTAAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	165432285	165420783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_165421247_165429318_165429425_165432178
ENSMUSG00000026566.16_165421223_165436173_1	chr1	-	644	5	ISM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	25925	1414	942	-241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCACTCTGGCGGACACCA	NA	NA	NA	NA	NA	NA	NA	NA	165436173	165421222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_165421247_165429318_165429425_165432178_165432312_165433177_165433392_165436006
ENSMUSG00000026566.16_165429385_165462011_1	chr1	-	694	5	ISM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	87	9576	71	-8403	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGGAAGTGTCCCTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	165462011	165429384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_165429425_165432178_165432312_165433177_165433392_165436006_165436174_165461871
ENSMUSG00000026568.7_165288606_165308677_1	chr1	+	919	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	0	106	0	-106	multi-exon	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAGTACCAGTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	165288605	165308677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
ENSMUSG00000026568.7_165288793_165308783_2	chr1	+	838	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	187	0	187	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACCCCCCACTTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	165288792	165308783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
ENSMUSG00000026576.13_164264678_164285591_1	chr1	-	2247	6	FSM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	333	0	333	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	NA	NA	NA	NA	NA	NA	NA	164285591	164264677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329
ENSMUSG00000026576.13_164264678_164285649_1	chr1	-	2305	6	FSM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	275	0	275	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	NA	NA	NA	NA	NA	NA	NA	164285649	164264677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329
ENSMUSG00000026576.13_164264678_164285733_1	chr1	-	2389	6	FSM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	191	0	191	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	NA	NA	NA	NA	NA	NA	NA	164285733	164264677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329
ENSMUSG00000026576.13_164264920_164286474_1	chr1	-	2292	7	FSM	ENSMUSG00000026576.13	ENST00000367816.5	2587	7	53	242	53	-242	multi-exon	FALSE	canonical	NA	NA	NA	NA	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTTCTGCAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	164286474	164264919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329_164285818_164286413
ENSMUSG00000026576.13_164264970_164286528_1	chr1	-	2296	7	FSM	ENSMUSG00000026576.13	ENST00000367816.5	2587	7	-1	292	-1	-292	multi-exon	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATTTTCATGGTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	164286528	164264969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329_164285818_164286413
ENSMUSG00000026577.14_164119372_164123373_1	chr1	-	704	2	ISM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	11685	-327	11680	327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGTGTGTGGCTAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	164123373	164119371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_164119981_164123278
ENSMUSG00000026577.14_164119534_164125837_1	chr1	-	697	3	ISM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	9221	-165	9216	165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCTATATTATTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	164125837	164119533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_164119981_164123278_164123499_164125807
ENSMUSG00000026577.14_164119916_164129930_1	chr1	-	692	5	ISM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	5128	217	5123	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACCAACCACATTACTCA	NA	NA	NA	NA	NA	NA	NA	NA	164129930	164119915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852
ENSMUSG00000026577.14_164123423_164130086_1	chr1	-	639	4	ISM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	4972	3724	4967	-3724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGCAGACTTAGCACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	164130086	164123422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_164123499_164125807_164125937_164127113_164127314_164129852
ENSMUSG00000026578.7_164103154_164113964_1	chr1	+	1568	5	ISM	ENSMUSG00000026578.7	ENSMUST00000027867.7	1909	6	0	1452	0	-1452	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTTAAAGTGGGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	164103153	164113964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_164103331_164105742_164105884_164107435_164108384_164109959_164110107_164113809
ENSMUSG00000026578.7_164103277_164115140_1	chr1	+	1510	6	FSM	ENSMUSG00000026578.7	ENSMUST00000027867.7	1909	6	123	276	123	-276	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCGGCTCGAAGCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	164103276	164115140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_164103331_164105742_164105884_164107435_164108384_164109959_164110107_164113809_164113965_164115075
ENSMUSG00000026578.7_164107434_164115416_1	chr1	+	1593	4	ISM	ENSMUSG00000026578.7	ENSMUST00000027867.7	1909	6	4280	0	4280	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCATCTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	164107433	164115416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_164108384_164109959_164110107_164113809_164113965_164115075
ENSMUSG00000026578.7_164107548_164115416_1	chr1	+	1479	4	ISM	ENSMUSG00000026578.7	ENSMUST00000027867.7	1909	6	4394	0	4394	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCATCTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	164107547	164115416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_164108384_164109959_164110107_164113809_164113965_164115075
ENSMUSG00000026581.15_163889551_163893257_1	chr1	+	679	3	ISM	ENSMUSG00000026581.15	ENST00000650983.1	1240	7	-43	6554	0	-6554	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCAGTGTCTAGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	163889550	163893257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_163889761_163890621_163890704_163892870
ENSMUSG00000026581.15_163889654_163893886_1	chr1	+	684	4	ISM	ENSMUSG00000026581.15	ENST00000650983.1	1240	7	60	5925	0	-5925	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTTCATTTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	163889653	163893886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_163889761_163890621_163890704_163892870_163893258_163893778
ENSMUSG00000026581.15_163889758_163894198_1	chr1	+	599	5	ISM	ENSMUSG00000026581.15	ENST00000650983.1	1240	7	164	5613	0	-5613	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCCCCTGAGTTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	163889757	163894198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_163889761_163890621_163890704_163892870_163893258_163893778_163893887_163894179
ENSMUSG00000026581.15_163890662_163894250_1	chr1	+	608	4	ISM	ENSMUSG00000026581.15	ENST00000650983.1	1240	7	1068	5561	904	-5561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCCAGTCCAAGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	163890661	163894250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_163890704_163892870_163893258_163893778_163893887_163894179
ENSMUSG00000026581.15_163892870_163894365_1	chr1	+	682	3	ISM	ENSMUSG00000026581.15	ENST00000236147.6	989	5	-3	5446	-3	-5446	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGACTTTAGAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	163892869	163894365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_163893258_163893778_163893887_163894179
ENSMUSG00000026581.15_163892870_163898260_1	chr1	+	816	4	NIC	ENSMUSG00000026581.15	novel	2199	9	NA	NA	-3	-1551	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2677	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTGCAGATCATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	163892869	163898260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_163893258_163893778_163893887_163896441_163896628_163898126
ENSMUSG00000026581.15_163893081_163899811_2	chr1	+	781	5	NIC	ENSMUSG00000026581.15	novel	989	5	NA	NA	208	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	3015	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTATGTTCAATAACATC	NA	NA	NA	NA	NA	NA	NA	NA	163893080	163899811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_163893258_163893778_163893887_163896441_163896628_163898126_163898317_163899691
ENSMUSG00000026585.14_163607152_163743910_1	chr1	+	3178	20	FSM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	0	768	0	-768	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAAGTTTCTTTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	163607151	163743910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ENSMUSG00000026585.14_163607317_163744025_1	chr1	+	3128	20	FSM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	165	653	165	-653	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTTAACTGCAGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	163607316	163744025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ENSMUSG00000026585.14_163607395_163744113_1	chr1	+	3138	20	FSM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	243	565	243	-565	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTGCAATATCAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	163607394	163744113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ENSMUSG00000026585.14_163610595_163744226_1	chr1	+	3133	19	ISM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	3443	452	3443	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGGATAGGATGATTAATA	NA	NA	NA	NA	NA	NA	NA	NA	163610594	163744226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ENSMUSG00000026585.14_163621554_163744348_1	chr1	+	3128	18	ISM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	14402	330	14402	-330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTACTGAAGGAAACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	163621553	163744348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ENSMUSG00000026585.14_163621619_163744407_1	chr1	+	3122	18	ISM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	14467	271	14467	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTTTAGGAGCCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	163621618	163744407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ENSMUSG00000026585.14_163624906_163744678_1	chr1	+	3198	16	ISM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	17754	0	17754	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAACTCTCATTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	163624905	163744678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ENSMUSG00000026585.14_163676229_163743758_1	chr1	+	1622	11	ISM	ENSMUSG00000026585.14	ENSMUST00000077642.12	4012	21	69077	920	69077	-920	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGGTTCATAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	163676228	163743758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163739640_163739707_163743293
ENSMUSG00000026585.14_163689634_163744149_1	chr1	+	1579	8	ISM	ENSMUSG00000026585.14	ENSMUST00000077642.12	4012	21	82482	529	82482	-529	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCCTTACCTAAGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	163689633	163744149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163739640_163739707_163743293
ENSMUSG00000026596.14_156386356_156457563_1	chr1	+	1028	4	ISM	ENSMUSG00000026596.14	ENST00000392043.4	1847	9	-4	6914	-4	-6914	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCATGACAAGTGGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	156386355	156457563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_156386776_156450054_156450226_156452857_156453154_156457422
ENSMUSG00000026596.14_156386619_156464441_1	chr1	+	1552	9	FSM	ENSMUSG00000026596.14	ENST00000392043.4	1847	9	259	36	0	-36	multi-exon	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAACAATGTTCCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	156386618	156464441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_156386776_156450054_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387
ENSMUSG00000026596.14_156386619_156468752_1	chr1	+	2015	12	FSM	ENSMUSG00000026596.14	ENSMUST00000027888.13	3549	12	0	1534	0	-1534	multi-exon	FALSE	canonical	NA	NA	NA	NA	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCGAGAAATGGAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	156386618	156468752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_156386776_156448408_156448472_156450054_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468562
ENSMUSG00000026596.14_156443493_156452946_1	chr1	+	459	4	ISM	ENSMUSG00000026596.14	ENST00000344730.7	4426	13	14	18539	14	-11531	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCACTCCAGTTAATAG	NA	NA	NA	NA	NA	NA	NA	NA	156443492	156452946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_156443629_156448408_156448472_156450054_156450226_156452857
ENSMUSG00000026596.14_156450103_156469752_1	chr1	+	2747	10	ISM	ENSMUSG00000026596.14	ENSMUST00000027888.13	3549	12	63484	534	51	-534	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGACTGCCCCACCTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	156450102	156469752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468562
ENSMUSG00000026596.14_156450103_156469861_1	chr1	+	2856	10	ISM	ENSMUSG00000026596.14	ENSMUST00000027888.13	3549	12	63484	425	51	-425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACCTCAAGTGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	156450102	156469861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468562
ENSMUSG00000026596.14_156450146_156469325_1	chr1	+	1965	11	ISM	ENSMUSG00000026596.14	ENSMUST00000166172.9	10151	13	63589	7813	94	-961	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAGCCCCTGATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	156450145	156469325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468562_156468800_156469111
ENSMUSG00000026596.14_156452943_156469478_1	chr1	+	1953	10	ISM	ENSMUSG00000026596.14	ENSMUST00000166172.9	10151	13	66386	7660	2891	-808	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCAGCCAAGGCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	156452942	156469478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468562_156468800_156469111
ENSMUSG00000026596.14_156453052_156470060_1	chr1	+	2738	9	ISM	ENSMUSG00000026596.14	ENSMUST00000027888.13	3549	12	66433	226	3000	-226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGGACACTGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	156453051	156470060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468562
ENSMUSG00000026596.14_156457501_156470286_1	chr1	+	2784	8	ISM	ENSMUSG00000026596.14	ENSMUST00000027888.13	3549	12	70882	0	7449	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCGTCGGCTGAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	156457500	156470286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468562
ENSMUSG00000026596.14_156457550_156469394_1	chr1	+	1531	9	ISM	ENSMUSG00000026596.14	ENSMUST00000166172.9	10151	13	70993	7744	7498	-892	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCCCCAAAGGCAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	156457549	156469394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468562_156468800_156469111
ENSMUSG00000026596.14_156458913_156470404_1	chr1	+	2709	7	ISM	ENSMUSG00000026596.14	ENSMUST00000027888.13	3549	12	72294	-118	8861	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTCAGGTCCCTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	156458912	156470404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468562
ENSMUSG00000026596.14_156461317_156469861_1	chr1	+	1595	6	ISM	ENSMUSG00000026596.14	ENSMUST00000166172.9	10151	13	74760	7277	11265	-425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACCTCAAGTGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	156461316	156469861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468562_156468800_156469111
ENSMUSG00000026596.14_156468007_156470286_1	chr1	+	1588	3	ISM	ENSMUSG00000026596.14	ENSMUST00000166172.9	10151	13	81450	6852	17955	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCGTCGGCTGAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	156468006	156470286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_156468183_156468562_156468800_156469111
ENSMUSG00000026596.14_156468660_156470055_1	chr1	+	1084	2	ISM	ENSMUSG00000026596.14	ENST00000504405.5	3017	11	18608	231	18608	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAACTGGTGGACACTGG	NA	NA	NA	NA	NA	NA	NA	NA	156468659	156470055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_156468800_156469111
ENSMUSG00000026600.13_156255434_156259818_1	chr1	-	3297	2	ISM	ENSMUSG00000026600.13	ENSMUST00000051396.13	2925	15	34556	-1929	34556	1929	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTTGTTGATGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	156259818	156255433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156258686_156259773
ENSMUSG00000026600.13_156255905_156265305_1	chr1	-	3292	6	ISM	ENSMUSG00000026600.13	ENSMUST00000051396.13	2925	15	29069	-1458	29069	1458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTAAGTGACCCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	156265305	156255904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273
ENSMUSG00000026600.13_156256197_156268132_1	chr1	-	3282	9	ISM	ENSMUSG00000026600.13	ENSMUST00000051396.13	2925	15	26242	-1166	26242	1166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGGCCACTTCTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	156268132	156256196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076
ENSMUSG00000026600.13_156256371_156268957_1	chr1	-	3290	10	ISM	ENSMUSG00000026600.13	ENSMUST00000051396.13	2925	15	25417	-992	25417	992	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTCCTCAGGTGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	156268957	156256370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798
ENSMUSG00000026600.13_156256432_156269042_1	chr1	-	3314	10	ISM	ENSMUSG00000026600.13	ENSMUST00000051396.13	2925	15	25332	-931	25332	931	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGAGACAAGGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	156269042	156256431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798
ENSMUSG00000026600.13_156256786_156274232_1	chr1	-	3289	13	ISM	ENSMUSG00000026600.13	ENSMUST00000051396.13	2925	15	20142	-577	20142	577	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCGAACTCAGAAATCCAC	NA	NA	NA	NA	NA	NA	NA	NA	156274232	156256785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110
ENSMUSG00000026601.15_156176577_156215681_1	chr1	-	862	6	ISM	ENSMUSG00000026601.15	ENST00000617277.4	1866	15	31302	-1	31302	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTTAGAGACCCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	156215681	156176576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156176680_156178927_156179022_156193185_156193464_156208349_156208514_156209945_156210048_156215560
ENSMUSG00000026601.15_156178928_156219590_1	chr1	-	867	6	ISM	ENSMUSG00000026601.15	ENST00000617277.4	1866	15	27393	2350	27393	-2350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTACTTGTATGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	156219590	156178927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156179022_156193185_156193464_156208349_156208514_156209945_156210048_156215560_156215682_156219482
ENSMUSG00000026601.15_156193249_156220321_1	chr1	-	810	6	ISM	ENSMUSG00000026601.15	ENST00000617277.4	1866	15	26662	16671	26662	-16671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAAGCGCTGTTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	156220321	156193248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156193464_156208349_156208514_156209945_156210048_156215560_156215682_156219482_156219588_156220218
ENSMUSG00000026601.15_156208350_156225112_1	chr1	-	858	7	ISM	ENSMUSG00000026601.15	ENST00000617277.4	1866	15	21871	31772	21871	-31772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTCTGCAAGAATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	156225112	156208349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156208514_156209945_156210048_156215560_156215682_156219482_156219588_156220218_156220360_156223001_156223124_156225009
ENSMUSG00000026601.15_156208502_156227815_1	chr1	-	827	9	ISM	ENSMUSG00000026601.15	ENST00000617277.4	1866	15	19168	31924	19168	-31924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGATGGTGGAGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	156227815	156208501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156208514_156209945_156210048_156215560_156215682_156219482_156219588_156220218_156220360_156223001_156223124_156225009_156225113_156226061_156226119_156227751
ENSMUSG00000026601.15_156209945_156230456_1	chr1	-	894	9	ISM	ENSMUSG00000026601.15	ENSMUST00000213088.2	3561	25	17542	51957	16527	-33367	internal_fragment	TRUE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCCCAGCTTACTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	156230456	156209944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156210048_156215560_156215682_156219482_156219588_156220218_156220360_156223001_156223124_156225009_156225113_156226061_156226119_156227751_156227838_156230400
ENSMUSG00000026601.15_156215559_156230515_1	chr1	-	852	8	ISM	ENSMUSG00000026601.15	ENSMUST00000213088.2	3561	25	17483	57571	16468	-38981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCATCTGGCCTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	156230515	156215558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156215682_156219482_156219588_156220218_156220360_156223001_156223124_156225009_156225113_156226061_156226119_156227751_156227838_156230400
ENSMUSG00000026601.15_156215559_156245840_1	chr1	-	889	9	ISM	ENSMUSG00000026601.15	ENSMUST00000213088.2	3561	25	2158	57571	1143	-38981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCATCTGGCCTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	156245840	156215558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156215682_156219482_156219588_156220218_156220360_156223001_156223124_156225009_156225113_156226061_156226119_156227751_156227838_156230400_156230516_156245803
ENSMUSG00000026601.15_156220218_156246880_1	chr1	-	801	8	ISM	ENSMUSG00000026601.15	ENSMUST00000213088.2	3561	25	1118	62230	103	-43640	internal_fragment	TRUE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACGTGGCGGCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	156246880	156220217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156220360_156223001_156223124_156225009_156225113_156226061_156226119_156227751_156227838_156230400_156230516_156245803_156245908_156246808
ENSMUSG00000026603.14_189612691_189618828_1	chr1	-	889	5	ISM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	35732	2	35732	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTTTCTGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	189618828	189612690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_189613064_189614305_189614415_189616020_189616196_189617495_189617617_189618717
ENSMUSG00000026603.14_189612691_189618830_1	chr1	-	897	5	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	35730	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTTTCTGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	189618830	189612690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_189613064_189614305_189614415_189616020_189616189_189617482_189617617_189618717
ENSMUSG00000026603.14_189612839_189623664_1	chr1	-	912	7	ISM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	30896	150	30896	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTCTCTCCAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	189623664	189612838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_189613064_189614305_189614415_189616020_189616196_189617495_189617617_189618717_189618829_189621011_189621115_189623596
ENSMUSG00000026603.14_189612953_189623656_1	chr1	-	785	7	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	30904	-264	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	77	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACAGGACTTGAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	189623656	189612952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_189613064_189614305_189614415_189616020_189616196_189617500_189617617_189618717_189618829_189621011_189621115_189623596
ENSMUSG00000026603.14_189612982_189628825_1	chr1	-	827	8	ISM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	25735	293	25735	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACCCCAGCTTTCCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	189628825	189612981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_189613064_189614305_189614415_189616020_189616196_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767
ENSMUSG00000026603.14_189613001_189628824_1	chr1	-	807	8	ISM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	25736	312	25736	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTGAGAGCCACTGACT	NA	NA	NA	NA	NA	NA	NA	NA	189628824	189613000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_189613064_189614305_189614415_189616020_189616196_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767
ENSMUSG00000026603.14_189613003_189628822_1	chr1	-	807	8	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	25738	-314	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGATTGAGAGCCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	189628822	189613002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_189613064_189614305_189614415_189616020_189616189_189617484_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767
ENSMUSG00000026603.14_189614305_189629682_1	chr1	-	874	8	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	24878	-1616	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTGGGGCTTAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	189629682	189614304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_189614415_189616020_189616199_189617500_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619
ENSMUSG00000026603.14_189614305_189629682_2	chr1	-	880	8	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	24878	-1616	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTGGGGCTTAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	189629682	189614304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_189614415_189616020_189616189_189617484_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619
ENSMUSG00000026603.14_189614381_189632046_1	chr1	-	830	9	ISM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	22514	1692	22514	-1692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGGCTGAAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	189632046	189614380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_189614415_189616020_189616196_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014
ENSMUSG00000026603.14_189616021_189632125_1	chr1	-	875	8	ISM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	22435	3332	22435	-3332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGCCGGGCGGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	189632125	189616020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_189616196_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014
ENSMUSG00000026603.14_189616021_189632129_1	chr1	-	883	8	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	22431	-3332	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGCCGGGCGGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	189632129	189616020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_189616189_189617484_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014
ENSMUSG00000026603.14_189616021_189632129_2	chr1	-	877	8	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	22431	-3332	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGCCGGGCGGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	189632129	189616020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_189616199_189617500_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014
ENSMUSG00000026603.14_189616115_189654327_1	chr1	-	869	10	ISM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	233	3426	233	-3426	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACATGATGTACCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	189654327	189616114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_189616196_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ENSMUSG00000026603.14_189616140_189642078_1	chr1	-	787	9	ISM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	12482	3451	12482	-3451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGGACAGCAATGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	189642078	189616139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_189616196_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047
ENSMUSG00000026603.14_189617496_189654450_1	chr1	-	911	9	ISM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	110	4807	110	-4807	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACCTTTCTGTGTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	189654450	189617495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ENSMUSG00000026603.14_189618717_189654560_1	chr1	-	901	8	ISM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	0	6028	0	-6028	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTCACTGATGGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	189654560	189618716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ENSMUSG00000026604.18_189530707_189564995_1	chr1	+	409	4	ISM	ENSMUSG00000026604.18	ENSMUST00000027898.7	2666	18	11838	37270	11804	-37270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCAGGCGGAGTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	189530706	189564995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_189530879_189554785_189554884_189557226_189557295_189564924
ENSMUSG00000026604.18_189530809_189568572_1	chr1	+	342	5	ISM	ENSMUSG00000026604.18	ENST00000543945.5	3703	17	11906	33832	11906	-33693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGGGGATTTTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	189530808	189568572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189568537
ENSMUSG00000026604.18_189564926_189575377_1	chr1	+	349	5	ISM	ENSMUSG00000026604.18	ENST00000543945.5	3703	17	46023	27027	46023	-26888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTAGACGCCAGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	189564925	189575377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_189564996_189568537_189568627_189571668_189571757_189572658_189572742_189575358
ENSMUSG00000026604.18_189568609_189582261_1	chr1	+	367	6	ISM	ENSMUSG00000026604.18	ENSMUST00000027898.7	2666	18	49740	20004	49706	-20004	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCACAACAGCCTGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	189568608	189582261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220
ENSMUSG00000026604.18_189571734_189582384_1	chr1	+	407	5	ISM	ENSMUSG00000026604.18	ENSMUST00000027898.7	2666	18	52865	19881	52831	-19881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAACCTTAGCATCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	189571733	189582384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220
ENSMUSG00000026604.18_189583380_189587167_1	chr1	+	371	2	ISM	ENSMUSG00000026604.18	ENST00000543945.5	3703	17	64477	15237	64477	-15098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGATGTTGGCAGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	189583379	189587167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_189583705_189587121
ENSMUSG00000026604.18_189583526_189588877_1	chr1	+	370	3	ISM	ENSMUSG00000026604.18	ENST00000543945.5	3703	17	64623	13527	64623	-13388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAGCAGATTCCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	189583525	189588877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_189583705_189587121_189587266_189588830
ENSMUSG00000026604.18_189583556_189588949_1	chr1	+	412	3	ISM	ENSMUSG00000026604.18	ENST00000543945.5	3703	17	64653	13455	64653	-13316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCGGATCCGAGAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	189583555	189588949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_189583705_189587121_189587266_189588830
ENSMUSG00000026604.18_189583629_189588978_1	chr1	+	368	3	ISM	ENSMUSG00000026604.18	ENST00000543945.5	3703	17	64726	13426	64726	-13287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGAATCGAGTGGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	189583628	189588978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_189583705_189587121_189587266_189588830
ENSMUSG00000026604.18_189587149_189592681_1	chr1	+	363	3	ISM	ENSMUSG00000026604.18	ENSMUST00000027898.7	2666	18	68280	9584	68246	-9584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCGCCACCCAGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	189587148	189592681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_189587266_189588830_189589050_189592654
ENSMUSG00000026604.18_189587199_189592737_1	chr1	+	369	3	ISM	ENSMUSG00000026604.18	ENSMUST00000027898.7	2666	18	68330	9528	68296	-9528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGAGCAGGGGGTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	189587198	189592737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_189587266_189588830_189589050_189592654
ENSMUSG00000026604.18_189588992_189595635_1	chr1	+	422	3	ISM	ENSMUSG00000026604.18	ENSMUST00000027898.7	2666	18	70123	6630	70089	-6630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTCTCCCCAGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	189588991	189595635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_189589050_189592654_189592784_189595400
ENSMUSG00000026604.18_189592721_189597631_1	chr1	+	361	3	ISM	ENSMUSG00000026604.18	ENSMUST00000027898.7	2666	18	73852	4634	73818	-4634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCACCCCCCCATCGTG	NA	NA	NA	NA	NA	NA	NA	NA	189592720	189597631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_189592784_189595400_189595636_189597568
ENSMUSG00000026604.18_189592762_189597699_1	chr1	+	388	3	ISM	ENSMUSG00000026604.18	ENSMUST00000027898.7	2666	18	73893	4566	73859	-4566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCATGATCTACTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	189592761	189597699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_189592784_189595400_189595636_189597568
ENSMUSG00000026604.18_189595451_189602155_1	chr1	+	381	3	ISM	ENSMUSG00000026604.18	ENSMUST00000027898.7	2666	18	76582	110	76548	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGAGCAGAGGATGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	189595450	189602155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_189595636_189597568_189597733_189602123
ENSMUSG00000026604.18_189595564_189602265_1	chr1	+	378	3	ISM	ENSMUSG00000026604.18	ENSMUST00000027898.7	2666	18	76695	0	76661	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTCTGGAGGAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	189595563	189602265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_189595636_189597568_189597733_189602123
ENSMUSG00000026605.15_189387124_189389152_1	chr1	-	477	2	ISM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	31131	14321	31131	-14321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGGAGAGGGGTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	189389152	189387123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_189387290_189388841
ENSMUSG00000026605.15_189392016_189400802_1	chr1	-	480	3	ISM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	19481	19213	19481	-19213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAGAAAAATCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	189400802	189392015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_189392270_189394193_189394330_189400712
ENSMUSG00000026608.14_188703292_188724884_1	chr1	-	2783	10	ISM	ENSMUSG00000026608.14	ENSMUST00000085678.8	3706	18	15153	0	15153	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGTCTTCAGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	188724884	188703291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759
ENSMUSG00000026608.14_188703482_188728010_1	chr1	-	2731	11	ISM	ENSMUSG00000026608.14	ENSMUST00000085678.8	3706	18	12027	190	12027	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTTCTGCAAATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	188728010	188703481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938
ENSMUSG00000026608.14_188703656_188728707_1	chr1	-	2687	12	ISM	ENSMUSG00000026608.14	ENSMUST00000085678.8	3706	18	11330	364	11330	-364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTCCAGCTGCTTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	188728707	188703655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596
ENSMUSG00000026608.14_188703896_188732516_1	chr1	-	2684	15	ISM	ENSMUSG00000026608.14	ENSMUST00000085678.8	3706	18	7521	604	7521	-604	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGTGCTAAGTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	188732516	188703895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449
ENSMUSG00000026608.14_188704156_188739885_1	chr1	-	2690	18	FSM	ENSMUSG00000026608.14	ENSMUST00000085678.8	3706	18	152	864	152	-864	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGACATGGTCCTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	188739885	188704155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ENSMUSG00000026608.14_188704245_188740025_1	chr1	-	2741	18	FSM	ENSMUSG00000026608.14	ENSMUST00000085678.8	3706	18	12	953	12	-953	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATCAAAAACTAACAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	188740025	188704244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ENSMUSG00000026610.14_187775534_187947082_1	chr1	+	5085	6	FSM	ENSMUSG00000026610.14	ENST00000673908.1	5087	6	5	-3	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGTTCTGTGTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	187775533	187947082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_187775947_187798537_187798655_187878509_187878621_187882354_187882538_187930772_187931043_187943091
ENSMUSG00000026610.14_187775647_187943193_1	chr1	+	945	5	FSM	ENSMUSG00000026610.14	ENST00000463665.5	2676	5	118	1613	118	-1613	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGTGCAGGCAAGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	187775646	187943193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_187775947_187878509_187878621_187882375_187882538_187930772_187931043_187943091
ENSMUSG00000026610.14_187775804_187943333_1	chr1	+	928	5	FSM	ENSMUSG00000026610.14	ENST00000463665.5	2676	5	275	1473	275	-1473	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAAAAGCCCCCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	187775803	187943333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_187775947_187878509_187878621_187882375_187882538_187930772_187931043_187943091
ENSMUSG00000026610.14_187775864_187943418_1	chr1	+	953	5	FSM	ENSMUSG00000026610.14	ENST00000463665.5	2676	5	335	1388	335	-1388	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGTGAACAACATTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	187775863	187943418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_187775947_187878509_187878621_187882375_187882538_187930772_187931043_187943091
ENSMUSG00000026614.8_185187444_185197566_1	chr1	+	1962	5	FSM	ENSMUSG00000026614.8	ENST00000366926.4	2535	5	186	387	186	-387	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGTTATCATCTCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	185187443	185197566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_185187877_185188548_185188627_185194883_185195124_185196273_185197020_185197101
ENSMUSG00000026614.8_185187578_185197666_1	chr1	+	1928	5	FSM	ENSMUSG00000026614.8	ENST00000366926.4	2535	5	320	287	320	-287	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGATCTGTGCAGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	185187577	185197666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_185187877_185188548_185188627_185194883_185195124_185196273_185197020_185197101
ENSMUSG00000026614.8_185187613_185197734_1	chr1	+	1961	5	FSM	ENSMUSG00000026614.8	ENST00000366926.4	2535	5	355	219	355	-219	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACAAATAAGCTAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	185187612	185197734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_185187877_185188548_185188627_185194883_185195124_185196273_185197020_185197101
ENSMUSG00000026614.8_185188545_185197957_1	chr1	+	1924	4	ISM	ENSMUSG00000026614.8	ENST00000366926.4	2535	5	1287	-4	1287	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTATTGAGAGAAGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	185188544	185197957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185188627_185194883_185195124_185196273_185197020_185197101
ENSMUSG00000026615.15_185095381_185114028_1	chr1	+	989	9	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	140	46529	140	-46529	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAAAAAGGAAGCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	185095380	185114028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996
ENSMUSG00000026615.15_185099787_185114168_1	chr1	+	1010	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	4546	46389	4546	-46389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGCACCCTTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	185099786	185114168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996
ENSMUSG00000026615.15_185101816_185117139_1	chr1	+	1008	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	6575	43418	6575	-43418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGACAACAGAGTACCACG	NA	NA	NA	NA	NA	NA	NA	NA	185101815	185117139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073
ENSMUSG00000026615.15_185103174_185117246_1	chr1	+	969	7	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	7933	43311	7933	-43311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCGTGCTGTCCAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	185103173	185117246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073
ENSMUSG00000026615.15_185105204_185119283_1	chr1	+	985	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	9963	41274	9963	-41274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGGACAAAATCTGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	185105203	185119283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255
ENSMUSG00000026615.15_185106352_185126615_1	chr1	+	985	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	11111	33942	11111	-33942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATGTCCTGGATGCGC	NA	NA	NA	NA	NA	NA	NA	NA	185106351	185126615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559
ENSMUSG00000026615.15_185111041_185128289_1	chr1	+	976	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	15800	32268	15800	-32268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGACTTTCTCAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	185111040	185128289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226
ENSMUSG00000026615.15_185111078_185128363_1	chr1	+	1013	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	15837	32194	15837	-32194	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGTTTTATTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	185111077	185128363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226
ENSMUSG00000026615.15_185111794_185129302_1	chr1	+	986	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	16553	31255	16553	-31255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACAAAGACTACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	185111793	185129302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256
ENSMUSG00000026615.15_185111828_185129378_1	chr1	+	1028	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	16587	31179	16587	-31179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTCACTTATGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	185111827	185129378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256
ENSMUSG00000026615.15_185111913_185129404_1	chr1	+	969	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	16672	31153	16672	-31153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGCCAGTGCTGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	185111912	185129404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256
ENSMUSG00000026615.15_185114028_185130618_1	chr1	+	1004	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	18787	29939	18787	-29939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCCTTAAAGATCTGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	185114027	185130618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590
ENSMUSG00000026615.15_185114102_185130655_1	chr1	+	967	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	18861	29902	18861	-29902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGGAGAGGGTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	185114101	185130655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590
ENSMUSG00000026615.15_185117142_185133520_1	chr1	+	1013	9	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	21901	27037	21901	-27037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGACCAGCACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	185117141	185133520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505
ENSMUSG00000026615.15_185117222_185133559_1	chr1	+	972	9	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	21981	26998	21981	-26998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGAGGATTCCTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	185117221	185133559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505
ENSMUSG00000026615.15_185117270_185133616_1	chr1	+	981	9	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	22029	26941	22029	-26941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTGAATTGAAAGCCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	185117269	185133616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505
ENSMUSG00000026615.15_185126558_185133865_1	chr1	+	1049	6	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	31317	26692	31317	-26692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTGCTGGATTCACA	NA	NA	NA	NA	NA	NA	NA	NA	185126557	185133865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505
ENSMUSG00000026615.15_185128273_185139240_1	chr1	+	973	6	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	33032	21317	33032	-21317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCCCCAGCATCGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	185128272	185139240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157
ENSMUSG00000026615.15_185129331_185139709_1	chr1	+	981	6	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	34090	20848	34090	-20848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTTCTTCAGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	185129330	185139709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687
ENSMUSG00000026615.15_185129375_185139777_1	chr1	+	1005	6	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	34134	20780	34134	-20780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGGGGCAGAAGACAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	185129374	185139777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687
ENSMUSG00000026615.15_185129432_185139825_1	chr1	+	996	6	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	34191	20732	34191	-20732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGAAAAGCAGAACAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	185129431	185139825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687
ENSMUSG00000026615.15_185130589_185139950_1	chr1	+	1090	5	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	35348	20607	35348	-20607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGAGACGTGTTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	185130588	185139950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687
ENSMUSG00000026615.15_185133622_185143924_1	chr1	+	1028	6	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	38381	16633	38381	-16633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAGTTGGCAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	185133621	185143924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899
ENSMUSG00000026615.15_185133774_185145401_1	chr1	+	974	7	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	38533	15156	38533	-15156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGGCTCAACCAGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	185133773	185145401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351
ENSMUSG00000026615.15_185139280_185146606_1	chr1	+	972	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	44039	13951	44039	-13951	internal_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAGAAGTTTGCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	185139279	185146606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526
ENSMUSG00000026615.15_185139730_185148019_1	chr1	+	963	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	44489	12538	44489	-12538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACCAGGAGAAAAGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	185139729	185148019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950
ENSMUSG00000026615.15_185139878_185150461_1	chr1	+	997	9	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	44637	10096	44637	-10096	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACTGATGGCAAAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	185139877	185150461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408
ENSMUSG00000026615.15_185142379_185150582_1	chr1	+	1048	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	47138	9975	47138	-9975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGCTGGAGTCCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	185142378	185150582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408
ENSMUSG00000026615.15_185143455_185152431_1	chr1	+	1001	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	48214	8126	48214	-8126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCTAAGCTGGAAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	185143454	185152431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323
ENSMUSG00000026615.15_185143527_185152484_1	chr1	+	982	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	48286	8073	48286	-8073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTCTATAGGCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	185143526	185152484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323
ENSMUSG00000026615.15_185143898_185156586_1	chr1	+	1025	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	48657	3971	48657	-3971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGAGACTTCCAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	185143897	185156586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507
ENSMUSG00000026615.15_185145645_185160206_1	chr1	+	949	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	50404	351	50404	-351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGGTGCTCCATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	185145644	185160206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ENSMUSG00000026615.15_185145695_185160264_1	chr1	+	957	8	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	50454	293	50454	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGCAGCCCGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	185145694	185160264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ENSMUSG00000026615.15_185146620_185160427_1	chr1	+	974	7	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	51379	130	51379	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCATTTTTTAAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	185146619	185160427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ENSMUSG00000026615.15_185147949_185160557_1	chr1	+	1043	6	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	52708	0	52708	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTGGTTCATCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	185147948	185160557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ENSMUSG00000026617.17_185064404_185089350_1	chr1	+	1518	9	FSM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	58	624	27	372	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTCCTGGAACTCACT	NA	NA	NA	NA	NA	NA	NA	NA	185064403	185089350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
ENSMUSG00000026617.17_185070382_185089511_1	chr1	+	1543	8	ISM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	6036	463	6005	-463	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACTCACTCTGTAGACA	NA	NA	NA	NA	NA	NA	NA	NA	185070381	185089511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
ENSMUSG00000026617.17_185077533_185089632_1	chr1	+	1490	6	ISM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	13187	342	13156	-342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAAATGAAAAAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	185077532	185089632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
ENSMUSG00000026617.17_185080968_185089798_1	chr1	+	1493	4	ISM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	16622	176	16591	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATGCATATAATGATAT	NA	NA	NA	NA	NA	NA	NA	NA	185080967	185089798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185081033_185084378_185084577_185086153_185086260_185088674
ENSMUSG00000026617.17_185084471_185089974_1	chr1	+	1512	3	ISM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	20125	0	20094	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGCCTTTATTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	185084470	185089974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_185084577_185086153_185086260_185088674
ENSMUSG00000026618.12_185018527_185021628_1	chr1	-	1086	3	ISM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	39965	1604	39965	-1604	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTAGATAAATAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	185021628	185018526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_185019389_185020236_185020382_185021549
ENSMUSG00000026618.12_185018732_185022777_1	chr1	-	1088	4	ISM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	38816	1809	38816	-1809	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAAAGCAGCAGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	185022777	185018731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682
ENSMUSG00000026618.12_185018852_185023591_1	chr1	-	1095	5	ISM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	38002	1929	38002	-1929	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCATATGATGGTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	185023591	185018851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515
ENSMUSG00000026618.12_185019313_185029732_1	chr1	-	1089	9	ISM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	31861	2390	31861	-2390	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCATACCTCTGAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	185029732	185019312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669
ENSMUSG00000026618.12_185020289_185034976_1	chr1	-	1079	9	ISM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	26617	3366	26617	-3366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGCAGGTGACATTGA	NA	NA	NA	NA	NA	NA	NA	NA	185034976	185020288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904
ENSMUSG00000026618.12_185021656_185048169_1	chr1	-	1084	10	ISM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	13424	4733	13424	-4733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGCCATGAGGGACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	185048169	185021655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090
ENSMUSG00000026618.12_185023562_185050810_1	chr1	-	1091	10	ISM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	10783	6639	10783	3673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAGAGAACTGTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	185050810	185023561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760
ENSMUSG00000026618.12_185026982_185053092_1	chr1	-	1089	10	ISM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	8501	10059	8501	253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTATATGCTGCACTTA	NA	NA	NA	NA	NA	NA	NA	NA	185053092	185026981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033
ENSMUSG00000026618.12_185034961_185055432_1	chr1	-	1082	10	ISM	ENSMUSG00000026618.12	ENSMUST00000110975.8	2801	17	6161	7726	6161	-7726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATTTTGGACATCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	185055432	185034960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382
ENSMUSG00000026618.12_185035537_185055966_1	chr1	-	1106	10	ISM	ENSMUSG00000026618.12	ENSMUST00000110975.8	2801	17	5627	8302	5627	-8302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCTGAGCAGCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	185055966	185035536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863
ENSMUSG00000026618.12_185048177_185057814_1	chr1	-	1119	10	ISM	ENSMUSG00000026618.12	ENSMUST00000110974.4	2431	13	3779	4134	3779	-4134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTGCATATCCCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	185057814	185048176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699
ENSMUSG00000026618.12_185053104_185061408_1	chr1	-	1090	9	ISM	ENSMUSG00000026618.12	ENSMUST00000110974.4	2431	13	185	9061	185	-9061	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTCACACAGCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	185061408	185053103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ENSMUSG00000026618.12_185054625_185061593_1	chr1	-	1147	8	ISM	ENSMUSG00000026618.12	ENSMUST00000110974.4	2431	13	0	10582	0	-10582	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGATGTTGTTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	185061593	185054624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ENSMUSG00000026620.12_184631027_184637635_1	chr1	-	130	3	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	94132	2041	94132	-2041	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCCCCGCTCCCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	184637635	184631026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184631076_184633005_184633051_184637599
ENSMUSG00000026620.12_184637725_184639304_1	chr1	-	152	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	92463	8739	92463	-8739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCGCAGCGCGGCTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	184639304	184637724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184637852_184639279
ENSMUSG00000026620.12_184637774_184639363_1	chr1	-	162	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	92404	8788	92404	-8788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGGGAGCTCCAGCCGAA	NA	NA	NA	NA	NA	NA	NA	NA	184639363	184637773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184637852_184639279
ENSMUSG00000026620.12_184639301_184640552_1	chr1	-	171	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	91215	10315	91215	-10315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAAGCGTATCGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	184640552	184639300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184639445_184640525
ENSMUSG00000026620.12_184639367_184640589_1	chr1	-	142	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	91178	10381	91178	-10381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCAGAAATCTATGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	184640589	184639366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184639445_184640525
ENSMUSG00000026620.12_184640527_184644211_1	chr1	-	119	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	87556	11541	87556	-11541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGACTGTCACTGGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	184644211	184640526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184640627_184644192
ENSMUSG00000026620.12_184640564_184644278_1	chr1	-	149	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	87489	11578	87489	-11578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGGTACGCAGCCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	184644278	184640563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184640627_184644192
ENSMUSG00000026620.12_184640604_184644343_1	chr1	-	174	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	87424	11618	87424	-11618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCGAGGAGGAATACGT	NA	NA	NA	NA	NA	NA	NA	NA	184644343	184640603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184640627_184644192
ENSMUSG00000026620.12_184644251_184644709_1	chr1	-	167	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	87058	15265	87058	-15265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCACAGCCAGCCCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	184644709	184644250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184644387_184644678
ENSMUSG00000026620.12_184644298_184644768_1	chr1	-	179	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	86999	15312	86999	-15312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACAGCCCGCAGACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	184644768	184644297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184644387_184644678
ENSMUSG00000026620.12_184644357_184644819_1	chr1	-	171	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	86948	15371	86948	-15371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAAGAGGCCTCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	184644819	184644356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184644387_184644678
ENSMUSG00000026620.12_184644751_184646792_1	chr1	-	161	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	84975	15765	84975	-15765	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCGCCTGCTCACCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	184646792	184644750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184644833_184646713
ENSMUSG00000026620.12_184651507_184651744_1	chr1	-	150	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	80023	22521	80023	-22521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGCGCGCTGTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	184651744	184651506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184651627_184651714
ENSMUSG00000026620.12_184651570_184651783_1	chr1	-	126	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	79984	22584	79984	-22584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTGAGAATCTCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	184651783	184651569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184651627_184651714
ENSMUSG00000026620.12_184651610_184651851_1	chr1	-	154	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	79916	22624	79916	-22624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCGAGGGAAGTACCGCA	NA	NA	NA	NA	NA	NA	NA	NA	184651851	184651609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184651627_184651714
ENSMUSG00000026620.12_184651871_184658043_1	chr1	-	169	3	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	73724	22885	73724	-22885	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGACACATTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	184658043	184651870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184651952_184653748_184653806_184658012
ENSMUSG00000026620.12_184651932_184658083_1	chr1	-	148	3	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	73684	22946	73684	-22946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTGATATGAATATTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	184658083	184651931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184651952_184653748_184653806_184658012
ENSMUSG00000026620.12_184677074_184731672_1	chr1	-	178	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	95	48088	95	-48088	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACCGCTTACAGAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	184731672	184677073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184677198_184731618
ENSMUSG00000026620.12_184677162_184731767_1	chr1	-	185	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	0	48176	0	-48176	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCCTGCCAAGTCAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	184731767	184677161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184677198_184731618
ENSMUSG00000026622.16_191553622_191558446_1	chr1	+	886	5	ISM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	66	6716	66	-6716	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCTGAATTTAAAGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	191553621	191558446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334
ENSMUSG00000026622.16_191553797_191559386_1	chr1	+	851	6	ISM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	241	5776	241	-5776	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCCAGCCCTGTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	191553796	191559386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261
ENSMUSG00000026622.16_191554644_191563348_1	chr1	+	857	6	ISM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	1088	1814	1088	-1814	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCCAAGTGCAGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	191554643	191563348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
ENSMUSG00000026622.16_191554755_191563439_1	chr1	+	837	6	ISM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	1199	1723	1199	-1723	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCAGGCAGATCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	191554754	191563439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
ENSMUSG00000026622.16_191554803_191563494_1	chr1	+	844	6	ISM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	1247	1668	1247	-1668	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGATACTGACAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	191554802	191563494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
ENSMUSG00000026622.16_191558376_191563667_1	chr1	+	851	4	ISM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	4820	1495	4820	-1495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTGGTTGGGCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	191558375	191563667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191558462_191559261_191559482_191561503_191561630_191563248
ENSMUSG00000026622.16_191559260_191563828_1	chr1	+	928	3	ISM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	5704	1334	5704	-1334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTCCAAGTGAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	191559259	191563828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191559482_191561503_191561630_191563248
ENSMUSG00000026622.16_191561522_191564031_1	chr1	+	891	2	ISM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	7966	1131	7966	-1131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGGGAGGGCGAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	191561521	191564031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191561630_191563248
ENSMUSG00000026623.17_191451601_191481667_1	chr1	+	146	2	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	369	29075	369	-29075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATTAAAGCAATCGCTA	NA	NA	NA	NA	NA	NA	NA	NA	191451600	191481667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191451731_191481651
ENSMUSG00000026623.17_191451633_191481738_1	chr1	+	185	2	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	401	29004	401	-29004	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGATGATGTGCCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	191451632	191481738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191451731_191481651
ENSMUSG00000026623.17_191451701_191481772_1	chr1	+	151	2	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	469	28970	469	-28970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTCTCAGTGCCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	191451700	191481772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191451731_191481651
ENSMUSG00000026623.17_191481649_191488085_1	chr1	+	164	2	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	30417	22657	30417	-22657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAAACTTTGGAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	191481648	191488085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191481771_191488043
ENSMUSG00000026623.17_191481730_191492123_1	chr1	+	175	3	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	30498	18619	30498	-18619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCACCTTGAACATAATT	NA	NA	NA	NA	NA	NA	NA	NA	191481729	191492123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191481771_191488043_191488140_191492085
ENSMUSG00000026623.17_191488078_191492181_1	chr1	+	158	2	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	36846	18561	36846	-18561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGGGCTTCCTCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	191488077	191492181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191488140_191492085
ENSMUSG00000026623.17_191492296_191495784_1	chr1	+	192	2	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	41064	14958	41064	-14958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGTTGTAGAACTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	191492295	191495784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191492360_191495656
ENSMUSG00000026623.17_191492328_191508448_1	chr1	+	173	3	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	41096	2294	41096	-2294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGTGCCCTTGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	191492327	191508448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191492360_191495656_191495784_191508434
ENSMUSG00000026623.17_191508435_191510519_1	chr1	+	132	2	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	57203	223	57203	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAAGCTGTGTGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	191508434	191510519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191508542_191510494
ENSMUSG00000026623.17_191508477_191510584_1	chr1	+	155	2	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	57245	158	57245	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTTGTCAGGCTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	191508476	191510584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191508542_191510494
ENSMUSG00000026623.17_191508519_191510647_1	chr1	+	176	2	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	57287	95	57287	-95	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGACTTGGACTTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	191508518	191510647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191508542_191510494
ENSMUSG00000026627.8_191058109_191080637_1	chr1	+	985	7	ISM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	0	2474	0	-2474	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAAAGATCCCTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	191058108	191080637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564
ENSMUSG00000026627.8_191060403_191081964_1	chr1	+	911	7	ISM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	2294	1147	2294	-1147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACTAAGCGTGAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	191060402	191081964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
ENSMUSG00000026627.8_191071025_191082089_1	chr1	+	916	6	ISM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	12916	1022	12916	-1022	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGAACTCACTTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	191071024	191082089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
ENSMUSG00000026627.8_191071091_191082153_1	chr1	+	914	6	ISM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	12982	958	12982	-958	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCGGCCCGGGAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	191071090	191082153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
ENSMUSG00000026627.8_191072948_191082290_1	chr1	+	929	5	ISM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	14839	821	14839	-821	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTTCCCTTAGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	191072947	191082290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
ENSMUSG00000026627.8_191073008_191082332_1	chr1	+	911	5	ISM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	14899	779	14899	-779	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCTGTACGCAGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	191073007	191082332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
ENSMUSG00000026627.8_191077250_191082454_1	chr1	+	889	4	ISM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	19141	657	19141	-657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTTCCTCGTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	191077249	191082454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191077317_191078956_191079102_191080564_191080673_191081885
ENSMUSG00000026627.8_191079050_191082634_1	chr1	+	909	3	ISM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	20941	477	20941	-477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGGTTGGGCAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	191079049	191082634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191079102_191080564_191080673_191081885
ENSMUSG00000026628.14_190902732_190909500_1	chr1	-	1326	3	ISM	ENSMUSG00000026628.14	ENSMUST00000027941.14	1984	4	6037	239	6037	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCACTTTTGTCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	190909500	190902731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_190903877_190904571_190904680_190909427
ENSMUSG00000026632.18_190778023_190793454_1	chr1	-	1110	9	ISM	ENSMUSG00000026632.18	ENSMUST00000110893.10	1242	10	1675	0	1585	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGATTTGTCTTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	190793454	190778022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_190778518_190781478_190781560_190785056_190785170_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421
ENSMUSG00000026632.18_190778367_190795101_1	chr1	-	807	9	FSM	ENSMUSG00000026632.18	ENST00000526641.5	745	9	-62	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCCCCTGCAAGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	190795101	190778366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_190778518_190781478_190781560_190785056_190785170_190787052_190787109_190787458_190787569_190791023_190791109_190792309_190792384_190793421_190793455_190794997
ENSMUSG00000026632.18_190778446_190787099_1	chr1	-	200	3	ISM	ENSMUSG00000026632.18	ENSMUST00000085633.12	1089	9	8002	411	7940	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCCGAGAAGTGACGAC	NA	NA	NA	NA	NA	NA	NA	NA	190787099	190778445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_190778518_190781478_190781560_190787052
ENSMUSG00000026632.18_190787508_190791067_1	chr1	-	168	3	ISM	ENSMUSG00000026632.18	ENST00000526997.5	692	9	3972	9141	3972	-90	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCCTAATCAGACAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	190791067	190787507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_190787569_190788559_190788623_190791023
ENSMUSG00000026634.17_190658885_190678590_1	chr1	+	2925	9	ISM	ENSMUSG00000026634.17	ENSMUST00000027947.13	3562	10	1576	569	1576	-569	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATTTTTACTAAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	190658884	190678590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_190658932_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ENSMUSG00000026634.17_190660689_190674407_1	chr1	+	1432	6	ISM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	0	4752	0	-4752	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGCACAGCAGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	190660688	190674407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317
ENSMUSG00000026634.17_190665129_190678730_1	chr1	+	2953	8	ISM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	4440	429	4440	-429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTACTGCCTCAGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	190665128	190678730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ENSMUSG00000026634.17_190665241_190678838_1	chr1	+	2949	8	ISM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	4552	321	4552	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTAAGCCTCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	190665240	190678838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ENSMUSG00000026634.17_190665302_190678879_1	chr1	+	2929	8	ISM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	4613	280	4613	-280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATCAATCATTATCGAA	NA	NA	NA	NA	NA	NA	NA	NA	190665301	190678879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ENSMUSG00000026634.17_190669815_190679159_1	chr1	+	2947	7	ISM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	9126	0	9126	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGGACAGAGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	190669814	190679159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ENSMUSG00000026637.15_191746941_191776657_1	chr1	-	482	4	ISM	ENSMUSG00000026637.15	ENSMUST00000195815.3	2214	11	211	17773	211	-17773	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTATCCTTGAGACCCAT	NA	NA	NA	NA	NA	NA	NA	NA	191776657	191746940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_191747044_191751193_191751252_191754716_191754936_191776555
ENSMUSG00000026641.14_171242004_171244924_1	chr1	+	589	6	ISM	ENSMUSG00000026641.14	ENST00000368019.5	997	9	-2	829	-2	-829	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTCGGTGCCTGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	171242003	171244924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244490_171244809
ENSMUSG00000026641.14_171243072_171245099_1	chr1	+	528	6	ISM	ENSMUSG00000026641.14	ENST00000368019.5	997	9	1066	654	1066	-654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGGCATCCAGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	171243071	171245099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171243123_171243282_171243399_171243702_171243805_171244377_171244490_171244809_171244898_171245040
ENSMUSG00000026641.14_171243076_171245238_1	chr1	+	554	7	ISM	ENSMUSG00000026641.14	ENST00000368019.5	997	9	1070	515	1070	-515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGATTGTACAGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	171243075	171245238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171243123_171243282_171243399_171243702_171243805_171244377_171244490_171244809_171244898_171245040_171245100_171245208
ENSMUSG00000026641.14_171243328_171245277_1	chr1	+	501	6	ISM	ENSMUSG00000026641.14	ENST00000368019.5	997	9	1322	476	1322	-476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGGAGAGCACCAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	171243327	171245277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171243399_171243702_171243805_171244377_171244490_171244809_171244898_171245040_171245100_171245208
ENSMUSG00000026641.14_171243361_171245348_1	chr1	+	539	6	ISM	ENSMUSG00000026641.14	ENST00000368019.5	997	9	1355	405	1355	-405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCGGCAGAGCAACCACCG	NA	NA	NA	NA	NA	NA	NA	NA	171243360	171245348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171243399_171243702_171243805_171244377_171244490_171244809_171244898_171245040_171245100_171245208
ENSMUSG00000026641.14_171244375_171245689_1	chr1	+	571	5	NNC	ENSMUSG00000026641.14	novel	997	9	NA	NA	2369	-64	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGGGACTCAGGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	171244374	171245689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_171244490_171244809_171244898_171245040_171245100_171245213_171245433_171245599
ENSMUSG00000026641.14_171244375_171245689_2	chr1	+	576	5	ISM	ENSMUSG00000026641.14	ENST00000368019.5	997	9	2369	64	2369	-64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGGGACTCAGGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	171244374	171245689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171244490_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ENSMUSG00000026641.14_171244436_171245251_1	chr1	+	328	4	ISM	ENSMUSG00000026641.14	ENSMUST00000167546.2	1822	10	5187	1060	2430	-502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTCCAAAATCATCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	171244435	171245251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171244574_171244809_171244898_171245040_171245100_171245208
ENSMUSG00000026641.14_171244488_171245305_1	chr1	+	330	4	ISM	ENSMUSG00000026641.14	ENSMUST00000167546.2	1822	10	5239	1006	2482	-448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTGGAATCCTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	171244487	171245305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171244574_171244809_171244898_171245040_171245100_171245208
ENSMUSG00000026643.17_3285305_3329053_1	chr2	+	3544	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	56	861	0	-861	multi-exon	TRUE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAATGTAAAAGCAACAA	NA	NA	NA	NA	NA	NA	NA	NA	3285304	3329053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ENSMUSG00000026643.17_3285318_3329103_1	chr2	+	3581	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	69	811	13	-811	multi-exon	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATATTGTGCTGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	3285317	3329103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ENSMUSG00000026643.17_3285318_3329149_1	chr2	+	3627	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	69	765	13	-765	multi-exon	FALSE	canonical	NA	NA	NA	NA	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAGCAAGTGGAACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	3285317	3329149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ENSMUSG00000026643.17_3305931_3329278_1	chr2	+	3548	13	ISM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	20682	636	20626	-636	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCTCCACTCCCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	3305930	3329278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ENSMUSG00000026643.17_3310535_3329464_1	chr2	+	3556	10	ISM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	25286	450	25230	-450	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCATAGAGCTCTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	3310534	3329464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ENSMUSG00000026643.17_3310598_3329503_1	chr2	+	3532	10	ISM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	25349	411	25293	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATATATTACAAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	3310597	3329503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ENSMUSG00000026643.17_3313528_3329604_1	chr2	+	3547	9	ISM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	28279	310	28223	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGATGCTTACCTAC	NA	NA	NA	NA	NA	NA	NA	NA	3313527	3329604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ENSMUSG00000026643.17_3313570_3329664_1	chr2	+	3565	9	ISM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	28321	250	28265	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAAGGCAGTGTACTGC	NA	NA	NA	NA	NA	NA	NA	NA	3313569	3329664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ENSMUSG00000026643.17_3313698_3329793_1	chr2	+	3653	8	ISM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	28449	121	28393	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTAAGTGCTGTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	3313697	3329793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ENSMUSG00000026643.17_3315729_3329914_1	chr2	+	3566	6	ISM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	30480	0	30424	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGAGTGTTTTCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	3315728	3329914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ENSMUSG00000026648.19_3426405_3454904_1	chr2	+	1967	13	NNC	ENSMUSG00000026648.19	novel	1907	13	NA	NA	6	63	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGAAAAAAAAACCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	3426404	3454904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_3426453_3430304_3430390_3434783_3434844_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884_3454285_3454324
ENSMUSG00000026648.19_3426405_3454904_2	chr2	+	1964	13	FSM	ENSMUSG00000026648.19	ENST00000378246.6	1907	13	6	-63	6	63	multi-exon	TRUE	canonical	NA	NA	NA	NA	3869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGAAAAAAAAACCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	3426404	3454904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_3426453_3430304_3430390_3434783_3434844_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884_3454302_3454344
ENSMUSG00000026648.19_3430302_3454904_1	chr2	+	1917	12	NNC	ENSMUSG00000026648.19	novel	2069	14	NA	NA	3903	63	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGAAAAAAAAACCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	3430301	3454904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_3430390_3434783_3434844_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453886_3454302_3454344
ENSMUSG00000026648.19_3430302_3454904_2	chr2	+	1918	12	NNC	ENSMUSG00000026648.19	novel	2069	14	NA	NA	3903	63	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGAAAAAAAAACCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	3430301	3454904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_3430390_3434783_3434844_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448111_3448200_3451315_3451411_3453884_3454302_3454344
ENSMUSG00000026648.19_3438035_3454136_1	chr2	+	1033	9	ISM	ENSMUSG00000026648.19	ENSMUST00000115066.8	3828	14	12833	8004	11	-705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTGGGCCCCTCGACA	NA	NA	NA	NA	NA	NA	NA	NA	3438034	3454136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_3438124_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
ENSMUSG00000026648.19_3439065_3451364_1	chr2	+	497	6	ISM	ENSMUSG00000026648.19	ENST00000378249.5	1710	10	1041	3477	1041	-3477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGCTTGGAAAATTGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	3439064	3451364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315
ENSMUSG00000026648.19_3451316_3454308_1	chr2	+	519	2	ISM	ENSMUSG00000026648.19	ENST00000378249.5	1710	10	13292	533	13292	-533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAAGCTCTGCAGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	3451315	3454308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_3451411_3453884
ENSMUSG00000026655.16_3714515_3781995_1	chr2	+	1950	4	NNC	ENSMUSG00000026655.16	novel	688	5	NA	NA	0	1171	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATTTCTACACTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	3714514	3781995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_3714674_3773832_3774017_3779456_3779606_3780537
ENSMUSG00000026655.16_3714515_3782050_1	chr2	+	2005	4	NNC	ENSMUSG00000026655.16	novel	688	5	NA	NA	0	-1129	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCGCTTTGGAATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	3714514	3782050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_3714674_3773832_3774017_3779456_3779606_3780537
ENSMUSG00000026655.16_3714627_3782118_1	chr2	+	1961	4	NNC	ENSMUSG00000026655.16	novel	3156	4	NA	NA	112	-1061	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTACAGGCCCACATTCC	NA	NA	NA	NA	NA	NA	NA	NA	3714626	3782118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_3714674_3773832_3774017_3779456_3779606_3780537
ENSMUSG00000026655.16_3750286_3779516_1	chr2	+	383	3	ISM	ENSMUSG00000026655.16	ENST00000496330.5	652	4	53	1148	53	-1138	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTGATAAAGCAGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	3750285	3779516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_3750343_3773752_3774017_3779454
ENSMUSG00000026655.16_3773948_3780664_1	chr2	+	345	3	NNC	ENSMUSG00000026655.16	novel	652	4	NA	NA	-1035	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGACCTGATGTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	3773947	3780664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_3774017_3779456_3779606_3780537
ENSMUSG00000026656.16_170793316_170795798_1	chr1	-	575	3	NNC	ENSMUSG00000026656.16	novel	573	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCTAGTATCCTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	170795798	170793315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_170793386_170794014_170794270_170795548
ENSMUSG00000026656.16_170793316_170795798_2	chr1	-	574	3	FSM	ENSMUSG00000026656.16	ENST00000236937.13	573	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCTAGTATCCTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	170795798	170793315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_170793381_170794010_170794270_170795548
ENSMUSG00000026657.18_4591139_4618753_1	chr2	+	5002	10	ISM	ENSMUSG00000026657.18	ENSMUST00000075767.14	6761	24	185353	101	26572	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAATTTATTCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	4591138	4618753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4612809_4612882_4615777
ENSMUSG00000026659.14_170701757_170712964_1	chr1	-	1229	6	FSM	ENSMUSG00000026659.14	ENSMUST00000027970.14	1374	6	145	0	145	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTGTTAGATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	170712964	170701756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708598_170712635
ENSMUSG00000026659.14_170701757_170713109_1	chr1	-	1368	6	NNC	ENSMUSG00000026659.14	novel	1374	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTGTTAGATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	170713109	170701756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_170702140_170707228_170707416_170707698_170707796_170708147_170708261_170708483_170708598_170712635
ENSMUSG00000026662.14_4886514_4912644_1	chr2	+	2243	8	FSM	ENSMUSG00000026662.14	ENST00000378614.8	2363	8	116	4	116	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTGCTCTTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	4886513	4912644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4911391
ENSMUSG00000026662.14_4904306_4911493_1	chr2	+	384	3	ISM	ENSMUSG00000026662.14	ENSMUST00000115019.2	2933	9	17250	1455	15070	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGGAGAAGGGCAACCGC	NA	NA	NA	NA	NA	NA	NA	NA	4904305	4911493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_4904375_4910282_4910496_4911391
ENSMUSG00000026662.14_4910395_4911668_1	chr2	+	378	2	ISM	ENSMUSG00000026662.14	ENSMUST00000115019.2	2933	9	23339	1280	21159	66	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGACTCTAAGAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	4910394	4911668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_4910496_4911391
ENSMUSG00000026662.14_4910447_4911728_1	chr2	+	386	2	ISM	ENSMUSG00000026662.14	ENSMUST00000115019.2	2933	9	23391	1220	21211	126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAGTGGATGCAATTA	NA	NA	NA	NA	NA	NA	NA	NA	4910446	4911728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_4910496_4911391
ENSMUSG00000026663.7_170537123_170574724_1	chr1	-	584	2	ISM	ENSMUSG00000026663.7	ENST00000680688.1	2609	15	108023	312	108023	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTAAAGAGATTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	170574724	170537122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_170537657_170574674
ENSMUSG00000026663.7_170537256_170614943_1	chr1	-	515	3	ISM	ENSMUSG00000026663.7	ENST00000680688.1	2609	15	67804	445	67804	-445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGGGCAGTGTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	170614943	170537255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_170537657_170574674_170574760_170614914
ENSMUSG00000026663.7_170537519_170622237_1	chr1	-	518	6	ISM	ENSMUSG00000026663.7	ENST00000680688.1	2609	15	60510	708	60510	-708	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTTCCCCTCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	170622237	170537518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225
ENSMUSG00000026663.7_170537545_170622316_1	chr1	-	571	6	ISM	ENSMUSG00000026663.7	ENST00000680688.1	2609	15	60431	734	60431	-734	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCAGCGGAACCAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	170622316	170537544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225
ENSMUSG00000026663.7_170537622_170622348_1	chr1	-	526	6	ISM	ENSMUSG00000026663.7	ENST00000680688.1	2609	15	60399	811	60399	-811	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGATTGACTGTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	170622348	170537621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225
ENSMUSG00000026663.7_170614879_170676786_1	chr1	-	1488	11	NNC	ENSMUSG00000026663.7	novel	1657	13	NA	NA	5961	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1083	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTGAACACAAGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	170676786	170614878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662396_170662610_170668249_170668454_170669254_170669382_170676685
ENSMUSG00000026663.7_170614879_170680495_1	chr1	-	1526	12	ISM	ENSMUSG00000026663.7	ENST00000679833.1	1657	13	2252	-1	2252	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTGAACACAAGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	170680495	170614878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680465
ENSMUSG00000026663.7_170614879_170680495_2	chr1	-	1520	12	NNC	ENSMUSG00000026663.7	novel	1657	13	NA	NA	2252	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTGAACACAAGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	170680495	170614878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643078_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680465
ENSMUSG00000026663.7_170614879_170680495_3	chr1	-	1521	12	NNC	ENSMUSG00000026663.7	novel	1657	13	NA	NA	2252	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTGAACACAAGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	170680495	170614878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662605_170668249_170668454_170669254_170669382_170676685_170676787_170680465
ENSMUSG00000026663.7_170614879_170682719_1	chr1	-	1630	13	FSM	ENSMUSG00000026663.7	ENST00000679833.1	1657	13	28	-1	28	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTGAACACAAGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	170682719	170614878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680465_170680562_170682681
ENSMUSG00000026663.7_170614937_170627316_1	chr1	-	565	5	ISM	ENSMUSG00000026663.7	ENST00000680688.1	2609	15	55431	78126	55431	-23	internal_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGTTGTCTCATTTCGAA	NA	NA	NA	NA	NA	NA	NA	NA	170627316	170614936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_170615030_170616176_170616245_170621525_170621626_170622225_170622396_170627182
ENSMUSG00000026663.7_170614997_170682719_1	chr1	-	1512	13	FSM	ENSMUSG00000026663.7	ENST00000680462.1	1623	13	28	83	28	-83	multi-exon	FALSE	canonical	NA	NA	NA	NA	1762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTCCCCTGGAAGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	170682719	170614996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680465_170680562_170682681
ENSMUSG00000026663.7_170616177_170643085_1	chr1	-	564	5	ISM	ENSMUSG00000026663.7	ENST00000680688.1	2609	15	39662	79366	39662	-1263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAGATGCAGAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	170643085	170616176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_170616245_170621525_170621626_170622225_170622396_170627182_170627315_170642991
ENSMUSG00000026663.7_170621570_170646890_1	chr1	-	525	5	ISM	ENSMUSG00000026663.7	ENST00000680688.1	2609	15	35857	84759	35857	-6656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAGAAGAATGACAAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	170646890	170621569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_170621626_170622225_170622396_170627182_170627315_170642991_170643084_170646815
ENSMUSG00000026663.7_170622224_170647001_1	chr1	-	582	4	ISM	ENSMUSG00000026663.7	ENST00000680688.1	2609	15	35746	85413	35746	-7310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGGTGTGGACTGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	170647001	170622223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_170622396_170627182_170627315_170642991_170643084_170646815
ENSMUSG00000026663.7_170622340_170662435_1	chr1	-	513	5	ISM	ENSMUSG00000026663.7	ENST00000680688.1	2609	15	20312	85529	20312	-7426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGATCACTCTGTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	170662435	170622339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_170622396_170627182_170627315_170642991_170643084_170646815_170647002_170662388
ENSMUSG00000026664.8_4923830_4943245_1	chr2	+	1142	9	FSM	ENSMUSG00000026664.8	ENSMUST00000027975.8	1438	9	0	296	0	-296	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACACAGAAGGATGCTATC	NA	NA	NA	NA	NA	NA	NA	NA	4923829	4943245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_4923956_4927638_4927698_4930408_4930520_4932160_4932330_4933481_4933564_4935523_4935706_4940779_4940930_4942486_4942622_4943117
ENSMUSG00000026664.8_4932160_4943541_1	chr2	+	1143	6	ISM	ENSMUSG00000026664.8	ENSMUST00000027975.8	1438	9	8330	0	8330	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATATTAAGTCAATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	4932159	4943541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_4932330_4933481_4933564_4935523_4935706_4940779_4940930_4942486_4942622_4943117
ENSMUSG00000026670.16_169969571_169989140_1	chr1	-	1767	9	ISM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	13375	0	13375	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTTCTACCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	169989140	169969570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935
ENSMUSG00000026670.16_169969603_169989140_1	chr1	-	1735	9	ISM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	13375	32	13375	-31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGGACAGCAAAATAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	169989140	169969602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935
ENSMUSG00000026670.16_169969729_169994308_1	chr1	-	1723	10	ISM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	8207	158	8207	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGCTGGAAGCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	169994308	169969728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194
ENSMUSG00000026670.16_169969810_169994383_1	chr1	-	1717	10	ISM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	8132	239	8132	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTCCAAGCCAAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	169994383	169969809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194
ENSMUSG00000026670.16_169969866_169994429_1	chr1	-	1707	10	ISM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	8086	295	8086	-294	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTGTGATTCTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	169994429	169969865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194
ENSMUSG00000026670.16_169969997_170002377_1	chr1	-	1723	11	FSM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	138	426	138	-425	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGACCTGTCCTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	170002377	169969996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
ENSMUSG00000026670.16_169970051_170002455_1	chr1	-	1747	11	FSM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	60	480	60	-479	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCCTAACGGGCCACATA	NA	NA	NA	NA	NA	NA	NA	NA	170002455	169970050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
ENSMUSG00000026670.16_169970099_170002515_1	chr1	-	1759	11	FSM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	0	528	0	-527	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCATCGATGAGAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	170002515	169970098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
ENSMUSG00000026672.12_5025453_5059427_1	chr2	-	2375	13	ISM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	9429	0	89	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	5059427	5025452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350
ENSMUSG00000026672.12_5025664_5068749_1	chr2	-	2296	14	FSM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	107	211	0	-209	multi-exon	FALSE	canonical	NA	NA	NA	NA	1521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTTGCAGATGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	5068749	5025663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ENSMUSG00000026672.12_5025774_5068856_1	chr2	-	2293	14	FSM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	0	321	0	-319	multi-exon	FALSE	canonical	NA	NA	NA	NA	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGATTGGAGTCCTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	5068856	5025773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ENSMUSG00000026672.12_5036071_5059452_1	chr2	-	1310	10	NNC	ENSMUSG00000026672.12	novel	1382	10	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGTCAGGCTAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	5059452	5036070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041574_5044949_5045099_5047257_5047332_5050797_5050951_5057780_5058002_5059350
ENSMUSG00000026672.12_5036071_5059452_2	chr2	-	1318	10	FSM	ENSMUSG00000026672.12	ENST00000378747.8	1382	10	64	0	64	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGTCAGGCTAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	5059452	5036070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045099_5047257_5047332_5050797_5050951_5057780_5058002_5059350
ENSMUSG00000026672.12_5036071_5059503_1	chr2	-	1368	10	NNC	ENSMUSG00000026672.12	novel	1382	10	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGTCAGGCTAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	5059503	5036070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045099_5047257_5047332_5050797_5050951_5057781_5058002_5059350
ENSMUSG00000026672.12_5036071_5059503_2	chr2	-	1363	10	NNC	ENSMUSG00000026672.12	novel	1382	10	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGTCAGGCTAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	5059503	5036070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045099_5047257_5047332_5050797_5050945_5057780_5058002_5059350
ENSMUSG00000026672.12_5036071_5059503_3	chr2	-	1369	10	FSM	ENSMUSG00000026672.12	ENST00000378747.8	1382	10	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGTCAGGCTAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	5059503	5036070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045099_5047257_5047332_5050797_5050951_5057780_5058002_5059350
ENSMUSG00000026672.12_5036071_5059503_4	chr2	-	1363	10	NNC	ENSMUSG00000026672.12	novel	1382	10	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGTCAGGCTAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	5059503	5036070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_5036230_5037941_5038030_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045099_5047257_5047332_5050797_5050951_5057780_5058002_5059350
ENSMUSG00000026672.12_5036149_5050885_1	chr2	-	838	8	ISM	ENSMUSG00000026672.12	ENST00000378752.7	1368	10	8631	78	8631	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGATGGATGAGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	5050885	5036148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797
ENSMUSG00000026672.12_5037984_5057841_1	chr2	-	841	8	ISM	ENSMUSG00000026672.12	ENST00000378764.6	1199	9	1675	32	1675	-32	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGGCACTGAAAACAAT	NA	NA	NA	NA	NA	NA	NA	NA	5057841	5037983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5050951_5057780
ENSMUSG00000026672.12_5039777_5059452_1	chr2	-	903	7	ISM	ENSMUSG00000026672.12	ENST00000378764.6	1199	9	64	1825	64	-1825	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTCATTTAATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	5059452	5039776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5050951_5057780_5058002_5059350
ENSMUSG00000026675.13_169777104_169788688_1	chr1	-	3976	5	ISM	ENSMUSG00000026675.13	ENSMUST00000027989.13	4612	9	8122	0	8122	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAGACTCAGTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	169788688	169777103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_169780704_169783503_169783603_169786991_169787049_169787255_169787361_169788573
ENSMUSG00000026675.13_169777104_169788724_1	chr1	-	4012	5	ISM	ENSMUSG00000026675.13	ENSMUST00000027989.13	4612	9	8086	0	8086	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAGACTCAGTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	169788724	169777103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_169780704_169783503_169783603_169786991_169787049_169787255_169787361_169788573
ENSMUSG00000026675.13_169777231_169791982_1	chr1	-	3952	6	ISM	ENSMUSG00000026675.13	ENSMUST00000027989.13	4612	9	4828	127	4828	-127	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGGTTGTTTCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	169791982	169777230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_169780704_169783503_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791959
ENSMUSG00000026675.13_169777343_169793292_1	chr1	-	3969	7	ISM	ENSMUSG00000026675.13	ENSMUST00000027989.13	4612	9	3518	239	3518	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTATATAATAAAGAATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	169793292	169777342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_169780704_169783503_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791959_169792075_169793255
ENSMUSG00000026675.13_169777394_169793327_1	chr1	-	3953	7	ISM	ENSMUSG00000026675.13	ENSMUST00000027989.13	4612	9	3483	290	3483	-290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTATTTCTTGTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	169793327	169777393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_169780704_169783503_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791959_169792075_169793255
ENSMUSG00000026675.13_169777522_169794898_1	chr1	-	3946	8	ISM	ENSMUSG00000026675.13	ENSMUST00000027989.13	4612	9	1912	418	1912	-418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACATTTGAAGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	169794898	169777521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_169780704_169783503_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791959_169792075_169793255_169793349_169794798
ENSMUSG00000026679.4_21185812_21201482_1	chr2	-	511	4	ISM	ENSMUSG00000026679.4	ENSMUST00000027992.3	1199	5	8694	270	-2170	-270	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACGACATCAGTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	21201482	21185811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_21185930_21193977_21194125_21199085_21199310_21201460
ENSMUSG00000026679.4_21185876_21201521_1	chr2	-	486	4	ISM	ENSMUSG00000026679.4	ENSMUST00000027992.3	1199	5	8655	334	-2209	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGATTCTGTACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	21201521	21185875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_21185930_21193977_21194125_21199085_21199310_21201460
ENSMUSG00000026679.4_21185910_21201596_1	chr2	-	527	4	ISM	ENSMUSG00000026679.4	ENSMUST00000027992.3	1199	5	8580	368	-2284	-368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	690	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTGCACAAAGAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	21201596	21185909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_21185930_21193977_21194125_21199085_21199310_21201460
ENSMUSG00000026679.4_21193993_21209898_1	chr2	-	518	4	ISM	ENSMUSG00000026679.4	ENSMUST00000027992.3	1199	5	278	8451	91	-8451	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCAGTTCTGCAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	21209898	21193992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_21194125_21199085_21199310_21201460_21201607_21209882
ENSMUSG00000026679.4_21194058_21209938_1	chr2	-	493	4	ISM	ENSMUSG00000026679.4	ENSMUST00000027992.3	1199	5	238	8516	51	-8516	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAATTACATCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	21209938	21194057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_21194125_21199085_21199310_21201460_21201607_21209882
ENSMUSG00000026683.15_169326138_169334879_1	chr1	-	731	4	ISM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	24118	258	24101	-258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAAGGCTGGAAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	169334879	169326137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812
ENSMUSG00000026683.15_169326243_169338012_1	chr1	-	744	5	ISM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	20985	363	20968	-363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTTTCTCTTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	169338012	169326242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968
ENSMUSG00000026683.15_169326271_169338106_1	chr1	-	810	5	ISM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	20891	391	20874	-391	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCTCACTAACACGGGT	NA	NA	NA	NA	NA	NA	NA	NA	169338106	169326270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968
ENSMUSG00000026683.15_169326392_169339780_1	chr1	-	734	6	ISM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	19217	512	19200	-512	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCTGAAGAAGAGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	169339780	169326391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735
ENSMUSG00000026683.15_169333666_169344227_1	chr1	-	672	7	ISM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	14770	7786	14753	4020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATTCTCTCATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	169344227	169333665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129
ENSMUSG00000026687.15_167177805_167184930_1	chr1	+	841	6	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	245	11171	245	-11171	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATCTCCTCTCATCATC	NA	NA	NA	NA	NA	NA	NA	NA	167177804	167184930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878
ENSMUSG00000026687.15_167177881_167184984_1	chr1	+	819	6	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	321	11117	321	-11117	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCTGATGGCCAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	167177880	167184984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878
ENSMUSG00000026687.15_167177881_167185025_1	chr1	+	860	6	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	321	11076	321	-11076	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCCCGACAGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	167177880	167185025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878
ENSMUSG00000026687.15_167180123_167189069_1	chr1	+	813	6	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	2563	7032	2563	-7032	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCTTCTGGAAGATACGA	NA	NA	NA	NA	NA	NA	NA	NA	167180122	167189069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971
ENSMUSG00000026687.15_167180193_167189120_1	chr1	+	794	6	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	2633	6981	2633	-6981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGAGTCCTCGGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	167180192	167189120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971
ENSMUSG00000026687.15_167181993_167189460_1	chr1	+	883	6	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	4433	6641	4433	-6641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTCTTGTTCGCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	167181992	167189460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372
ENSMUSG00000026687.15_167183302_167193374_1	chr1	+	862	7	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	5742	2727	5742	-2727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCAGGCTGGAACGTG	NA	NA	NA	NA	NA	NA	NA	NA	167183301	167193374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343
ENSMUSG00000026687.15_167184167_167195004_1	chr1	+	833	7	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	6607	1097	6607	-1097	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTACTACTCTCAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	167184166	167195004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ENSMUSG00000026687.15_167184226_167195046_1	chr1	+	816	7	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	6666	1055	6666	-1055	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACGTGGAGTCAGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	167184225	167195046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ENSMUSG00000026687.15_167184280_167195102_1	chr1	+	818	7	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	6720	999	6720	-999	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGAGTTGACTGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	167184279	167195102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ENSMUSG00000026687.15_167184957_167195216_1	chr1	+	838	6	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	7397	885	7397	-885	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTTTGAAAATGTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	167184956	167195216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ENSMUSG00000026687.15_167189385_167195458_1	chr1	+	816	4	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	11825	643	11825	-643	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATTCTTAAAGCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	167189384	167195458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167189461_167192076_167192219_167193343_167193457_167194973
ENSMUSG00000026687.15_167192167_167195606_1	chr1	+	798	3	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	14607	495	14607	-495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATCCTGTCTCAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	167192166	167195606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167192219_167193343_167193457_167194973
ENSMUSG00000026687.15_167193378_167195711_1	chr1	+	817	2	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	15818	390	15818	-390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAACAGCTGTGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	167193377	167195711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167193457_167194973
ENSMUSG00000026687.15_167193429_167195765_1	chr1	+	820	2	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	15869	336	15869	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCACTTAAACCCAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	167193428	167195765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167193457_167194973
ENSMUSG00000026688.6_167199841_167204903_1	chr1	-	576	4	ISM	ENSMUSG00000026688.6	ENSMUST00000028005.3	1097	6	16507	306	16507	-306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATCGGTGATGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	167204903	167199840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_167200212_167201361_167201435_167203020_167203079_167204829
ENSMUSG00000026688.6_167200030_167221410_1	chr1	-	602	6	FSM	ENSMUSG00000026688.6	ENSMUST00000028005.3	1097	6	0	495	0	-495	multi-exon	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGATTTCCAGTTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	167221410	167200029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_167200212_167201361_167201435_167203020_167203079_167204829_167204904_167205860_167205985_167221319
ENSMUSG00000026701.16_161071833_161074893_1	chr1	-	147	2	ISM	ENSMUSG00000026701.16	ENSMUST00000051925.5	959	6	3843	2665	3843	-2665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTTTGGGCATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	161074893	161071832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_161071913_161074826
ENSMUSG00000026701.16_161071887_161074941_1	chr1	-	141	2	ISM	ENSMUSG00000026701.16	ENSMUST00000051925.5	959	6	3795	2719	3795	-2719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACGGAAAAGTTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	161074941	161071886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_161071913_161074826
ENSMUSG00000026701.16_161074918_161078691_1	chr1	-	166	2	ISM	ENSMUSG00000026701.16	ENSMUST00000071718.12	2387	5	98	7236	45	-5750	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAAGCTGGCGCCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	161078691	161074917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_161074984_161078591
ENSMUSG00000026701.16_161074961_161078736_1	chr1	-	168	2	ISM	ENSMUSG00000026701.16	ENSMUST00000071718.12	2387	5	53	7279	0	-5793	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGACTTTACCCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	161078736	161074960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_161074984_161078591
ENSMUSG00000026708.17_160898337_160902457_1	chr1	+	721	2	ISM	ENSMUSG00000026708.17	ENSMUST00000111620.10	1910	5	0	11451	0	-11451	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTCCATCTCGAAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	160898336	160902457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_160898927_160902326
ENSMUSG00000026709.11_160869069_160872603_1	chr1	-	583	3	ISM	ENSMUSG00000026709.11	ENST00000647645.1	2064	16	25195	-164	25195	164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGAGTCTTCCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	160872603	160869068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160869501_160871182_160871259_160872528
ENSMUSG00000026709.11_160869312_160878918_1	chr1	-	676	6	ISM	ENSMUSG00000026709.11	ENST00000648807.1	1974	16	18880	79	18880	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTTCCAAACACTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	160878918	160869311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160877507_160877571_160878900
ENSMUSG00000026709.11_160869343_160878988_1	chr1	-	715	6	ISM	ENSMUSG00000026709.11	ENST00000648807.1	1974	16	18810	110	18810	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGACTCAGAAGAGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	160878988	160869342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160877507_160877571_160878900
ENSMUSG00000026709.11_160869412_160874425_1	chr1	-	574	5	ISM	ENSMUSG00000026709.11	ENST00000647645.1	2064	16	23373	179	23373	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGCAATGCTCCAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	160874425	160869411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346
ENSMUSG00000026709.11_160869451_160881560_1	chr1	-	677	7	ISM	ENSMUSG00000026709.11	ENST00000648807.1	1974	16	16238	218	16238	-218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAGCCTTCCCTAAATC	NA	NA	NA	NA	NA	NA	NA	NA	160881560	160869450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160877507_160877571_160878900_160879009_160881510
ENSMUSG00000026709.11_160869458_160874499_1	chr1	-	602	5	ISM	ENSMUSG00000026709.11	ENST00000647645.1	2064	16	23299	225	23299	-225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGATGTCATAGCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	160874499	160869457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346
ENSMUSG00000026709.11_160871182_160881694_1	chr1	-	762	6	ISM	ENSMUSG00000026709.11	ENST00000648807.1	1974	16	16104	1949	16104	-1949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACAATCTGTCTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	160881694	160871181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160871259_160872528_160872640_160872827_160873047_160877507_160877571_160878900_160879009_160881510
ENSMUSG00000026709.11_160872528_160879008_1	chr1	-	655	5	ISM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	19220	4357	18790	-3295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGGATACCTTCTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	160879008	160872527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900
ENSMUSG00000026709.11_160872528_160884104_1	chr1	-	756	6	ISM	ENSMUSG00000026709.11	ENST00000648807.1	1974	16	13694	3295	13694	-3295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGGATACCTTCTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	160884104	160872527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160872640_160872827_160873047_160877507_160877571_160878900_160879009_160881510_160881691_160884030
ENSMUSG00000026709.11_160872615_160885075_1	chr1	-	724	7	ISM	ENSMUSG00000026709.11	ENST00000648807.1	1974	16	12723	3382	12723	-3382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAACGGCAATGAGATA	NA	NA	NA	NA	NA	NA	NA	NA	160885075	160872614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160872640_160872827_160873047_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016
ENSMUSG00000026709.11_160872880_160881690_1	chr1	-	671	5	ISM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	16538	4709	16108	-3647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCTCCTAACTCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	160881690	160872879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510
ENSMUSG00000026709.11_160872880_160887662_1	chr1	-	743	7	ISM	ENSMUSG00000026709.11	ENST00000648807.1	1974	16	10136	3647	10136	-3647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCTCCTAACTCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	160887662	160872879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160873047_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614
ENSMUSG00000026709.11_160872992_160888352_1	chr1	-	677	8	ISM	ENSMUSG00000026709.11	ENST00000648807.1	1974	16	9446	3759	9446	-3759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGGTGCTCCGAGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	160888352	160872991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160873047_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305
ENSMUSG00000026709.11_160873035_160888425_1	chr1	-	707	8	ISM	ENSMUSG00000026709.11	ENST00000648807.1	1974	16	9373	3802	9373	-3802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGTTACGGCTAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	160888425	160873034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160873047_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305
ENSMUSG00000026709.11_160874347_160885123_1	chr1	-	681	6	ISM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	13105	6176	12675	-5114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAAATTGTCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	160885123	160874346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016
ENSMUSG00000026709.11_160878981_160890862_1	chr1	-	698	8	ISM	ENSMUSG00000026709.11	ENST00000647645.1	2064	16	6936	9748	6936	-9748	internal_fragment	TRUE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGAGCTCAGATTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	160890862	160878980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816
ENSMUSG00000026709.11_160881523_160892813_1	chr1	-	733	8	ISM	ENSMUSG00000026709.11	ENST00000647645.1	2064	16	4985	12290	4985	-12290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGATGAAGGTACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	160892813	160881522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794
ENSMUSG00000026709.11_160881641_160896689_1	chr1	-	703	9	ISM	ENSMUSG00000026709.11	ENST00000647645.1	2064	16	1109	12408	1109	-12408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGTTTGCTGCAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	160896689	160881640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649
ENSMUSG00000026709.11_160885014_160897581_1	chr1	-	665	8	ISM	ENSMUSG00000026709.11	ENST00000647645.1	2064	16	217	15781	217	-15781	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTTCTTGGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	160897581	160885013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ENSMUSG00000026709.11_160885050_160897650_1	chr1	-	698	8	ISM	ENSMUSG00000026709.11	ENST00000647645.1	2064	16	148	15817	148	-15817	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCAGCTTCTGATGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	160897650	160885049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ENSMUSG00000026709.11_160885102_160897710_1	chr1	-	706	8	ISM	ENSMUSG00000026709.11	ENST00000647645.1	2064	16	88	15869	88	-15869	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCAGGGAACCTGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	160897710	160885101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ENSMUSG00000026718.18_14133858_14142385_1	chr2	+	397	4	ISM	ENSMUSG00000026718.18	ENSMUST00000028050.14	3981	13	54858	6791	54858	-6791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCTCATTTTCTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	14133857	14142385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_14133983_14135834_14135930_14139163_14139253_14142297
ENSMUSG00000026718.18_14143780_14151088_1	chr2	+	376	3	ISM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	64871	3357	64780	1912	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCTGCTGCTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	14143779	14151088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_14143921_14146512_14146689_14151029
ENSMUSG00000026718.18_14143886_14151205_1	chr2	+	387	3	ISM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	64977	3240	64886	2029	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATCATCAACCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	14143885	14151205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_14143921_14146512_14146689_14151029
ENSMUSG00000026721.17_160051244_160075139_1	chr1	-	1265	6	ISM	ENSMUSG00000026721.17	ENST00000367688.3	1414	7	3891	-61	3891	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGGGGTTGATTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	160075139	160051243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160051939_160054054_160054253_160059365_160059438_160064195_160064280_160066100_160066206_160075028
ENSMUSG00000026721.17_160051357_160085105_1	chr1	-	1245	7	ISM	ENSMUSG00000026721.17	ENSMUST00000028052.12	6338	9	94036	4613	-6075	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTTCCAGAATTATTCATA	NA	NA	NA	NA	NA	NA	NA	NA	160085105	160051356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160051939_160054054_160054253_160059365_160059438_160064195_160064280_160066100_160066206_160075028_160075140_160085012
ENSMUSG00000026721.17_160051576_160269437_1	chr1	-	1242	10	FSM	ENSMUSG00000026721.17	ENST00000367687.5	1673	10	100	331	100	-271	multi-exon	FALSE	canonical	NA	NA	NA	NA	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACCACATTCAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	160269437	160051575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_160051939_160054054_160054253_160059365_160059438_160064195_160064280_160066100_160066206_160075028_160075140_160085012_160085106_160169605_160169735_160219751_160219794_160269392
ENSMUSG00000026721.17_160051628_160269481_1	chr1	-	1234	10	FSM	ENSMUSG00000026721.17	ENST00000367687.5	1673	10	56	383	56	-323	multi-exon	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTAAACTGACCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	160269481	160051627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_160051939_160054054_160054253_160059365_160059438_160064195_160064280_160066100_160066206_160075028_160075140_160085012_160085106_160169605_160169735_160219751_160219794_160269392
ENSMUSG00000026721.17_160051686_160269526_1	chr1	-	1221	10	FSM	ENSMUSG00000026721.17	ENST00000367687.5	1673	10	11	441	11	-381	multi-exon	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTAGACTCTTTTCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	160269526	160051685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_160051939_160054054_160054253_160059365_160059438_160064195_160064280_160066100_160066206_160075028_160075140_160085012_160085106_160169605_160169735_160219751_160219794_160269392
ENSMUSG00000026721.17_160066155_160078874_1	chr1	-	216	3	ISM	ENSMUSG00000026721.17	ENST00000367688.3	1414	7	156	14850	156	-14850	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGGTGGAGACTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	160078874	160066154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160066206_160075028_160075140_160078820
ENSMUSG00000026721.17_160084503_160472971_1	chr1	-	1302	10	ISM	ENSMUSG00000026721.17	ENST00000251507.8	2886	21	147467	-52	147467	44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGCAGTTTGAGAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	160472971	160084502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160084837_160085012_160085106_160169605_160169735_160219751_160219794_160269392_160269537_160270760_160270887_160281320_160281396_160299567_160299682_160454784_160454936_160472877
ENSMUSG00000026721.17_160084775_160528350_1	chr1	-	1241	12	ISM	ENSMUSG00000026721.17	ENSMUST00000028049.13	2748	21	92166	0	92088	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGGGAAAAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	160528350	160084774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160084837_160085012_160085106_160169605_160169735_160219751_160219794_160269392_160269537_160270760_160270887_160281320_160281396_160299567_160299682_160454784_160454936_160472877_160472972_160509610_160509753_160528281
ENSMUSG00000026721.17_160270760_160551759_1	chr1	-	1309	11	ISM	ENSMUSG00000026721.17	ENSMUST00000028049.13	2748	21	68757	185985	68679	-185985	internal_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGAAAAATGGGAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	160551759	160270759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160270887_160281320_160281396_160299567_160299682_160454784_160454936_160472877_160472972_160509610_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601
ENSMUSG00000026721.17_160281354_160561181_1	chr1	-	1232	11	ISM	ENSMUSG00000026721.17	ENSMUST00000028049.13	2748	21	59335	196579	59257	191523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTTTTCTTGCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	160561181	160281353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160281396_160299567_160299682_160454784_160454936_160472877_160472972_160509610_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098
ENSMUSG00000026721.17_160454848_160563290_1	chr1	-	1278	10	ISM	ENSMUSG00000026721.17	ENSMUST00000028049.13	2748	21	57226	370073	57148	18029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTAGCAGGATGCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	160563290	160454847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160454936_160472877_160472972_160509610_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117
ENSMUSG00000026721.17_160454913_160563328_1	chr1	-	1251	10	ISM	ENSMUSG00000026721.17	ENSMUST00000028049.13	2748	21	57188	370138	57110	17964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGGACTATTCACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	160563328	160454912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160454936_160472877_160472972_160509610_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117
ENSMUSG00000026721.17_160472932_160566526_1	chr1	-	1235	10	ISM	ENSMUSG00000026721.17	ENST00000357444.10	1728	12	54020	55	53912	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTGTCCTGAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	160566526	160472931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160472972_160509610_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117_160563329_160566465
ENSMUSG00000026721.17_160509611_160566658_1	chr1	-	1327	9	ISM	ENSMUSG00000026721.17	ENSMUST00000195442.6	1877	13	53850	9590	53780	-9590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAGTTGAATGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	160566658	160509610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117_160563329_160566465
ENSMUSG00000026721.17_160528368_160568454_1	chr1	-	1232	9	ISM	ENSMUSG00000026721.17	ENSMUST00000195442.6	1877	13	52054	28347	51984	-28347	intron_retention	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCGTGTATACCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	160568454	160528367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117_160563329_160566465_160566659_160568321
ENSMUSG00000026721.17_160529959_160620405_1	chr1	-	1263	9	ISM	ENSMUSG00000026721.17	ENST00000251507.8	2886	21	33	445404	33	-29938	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGGCTCTTAATGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	160620405	160529958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117_160563329_160566465_160566659_160568321_160568493_160620300
ENSMUSG00000026721.17_160551701_160620344_1	chr1	-	742	6	ISM	ENSMUSG00000026721.17	ENST00000357444.10	1728	12	202	78824	94	-51680	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGTTAAAGACTCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	160620344	160551700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160551760_160561098_160561274_160563117_160563329_160566465_160566659_160568432_160568493_160620300
ENSMUSG00000026721.17_160561122_160620508_1	chr1	-	824	5	ISM	ENSMUSG00000026721.17	ENST00000357444.10	1728	12	38	88245	0	-61101	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCTGTGAAATTAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	160620508	160561121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160561274_160563117_160563329_160566465_160566659_160568432_160568493_160620300
ENSMUSG00000026721.17_160561186_160620530_1	chr1	-	782	5	ISM	ENSMUSG00000026721.17	ENST00000357444.10	1728	12	16	88309	-14	-61165	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCAATTGCTTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	160620530	160561185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_160561274_160563117_160563329_160566465_160566659_160568432_160568493_160620300
ENSMUSG00000026723.11_13514018_13524669_1	chr2	-	2775	4	ISM	ENSMUSG00000026723.11	ENSMUST00000124488.7	3788	11	24810	193	24810	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCCACCCAACTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	13524669	13514017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566
ENSMUSG00000026723.11_13514097_13524751_1	chr2	-	2778	4	ISM	ENSMUSG00000026723.11	ENSMUST00000124488.7	3788	11	24728	272	24728	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTACAGAGCTTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	13524751	13514096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566
ENSMUSG00000026723.11_13514652_13538217_1	chr2	-	2774	10	ISM	ENSMUSG00000026723.11	ENSMUST00000124488.7	3788	11	11262	827	11262	-827	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCATGTGCTAGCTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	13538217	13514651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194
ENSMUSG00000026723.11_13514809_13549461_1	chr2	-	2786	11	FSM	ENSMUSG00000026723.11	ENSMUST00000124488.7	3788	11	18	984	18	-984	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCATAAATTCTTAATCA	NA	NA	NA	NA	NA	NA	NA	NA	13549461	13514808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194_13538305_13549379
ENSMUSG00000026725.18_159912599_159924808_1	chr1	-	1349	3	ISM	ENSMUSG00000026725.18	ENSMUST00000131919.2	3987	18	50650	-939	50645	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTCTCTTGTTATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	159924808	159912598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159913739_159915962_159916127_159924763
ENSMUSG00000026725.18_159912833_159925849_1	chr1	-	1305	4	ISM	ENSMUSG00000026725.18	ENSMUST00000131919.2	3987	18	49609	-705	49604	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTCAGCTCCCCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	159925849	159912832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159913739_159915962_159916127_159924763_159924932_159925782
ENSMUSG00000026725.18_159912945_159932471_1	chr1	-	1298	5	ISM	ENSMUSG00000026725.18	ENSMUST00000131919.2	3987	18	42987	-593	42982	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGCCCCTTTTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	159932471	159912944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159913739_159915962_159916127_159924763_159924932_159925782_159925880_159932396
ENSMUSG00000026725.18_159913076_159932996_1	chr1	-	1273	6	ISM	ENSMUSG00000026725.18	ENSMUST00000131919.2	3987	18	42462	-462	42457	462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTACTCCTTTTAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	159932996	159913075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159913739_159915962_159916127_159924763_159924932_159925782_159925880_159932396_159932549_159932967
ENSMUSG00000026725.18_159913223_159934643_1	chr1	-	1293	7	ISM	ENSMUSG00000026725.18	ENSMUST00000131919.2	3987	18	40815	-315	40810	315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATATCTCTGTATCCATC	NA	NA	NA	NA	NA	NA	NA	NA	159934643	159913222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159913739_159915962_159916127_159924763_159924932_159925782_159925880_159932396_159932549_159932967_159933101_159934580
ENSMUSG00000026725.18_159913279_159934689_1	chr1	-	1283	7	ISM	ENSMUSG00000026725.18	ENSMUST00000131919.2	3987	18	40769	-259	40764	259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGCAAAAAGGTGAACCAT	NA	NA	NA	NA	NA	NA	NA	NA	159934689	159913278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159913739_159915962_159916127_159924763_159924932_159925782_159925880_159932396_159932549_159932967_159933101_159934580
ENSMUSG00000026725.18_159913381_159937892_1	chr1	-	1280	8	ISM	ENSMUSG00000026725.18	ENSMUST00000131919.2	3987	18	37566	-157	37561	157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGAGCCAACAATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	159937892	159913380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159913739_159915962_159916127_159924763_159924932_159925782_159925880_159932396_159932549_159932967_159933101_159934580_159934712_159937815
ENSMUSG00000026725.18_159913426_159937959_1	chr1	-	1302	8	ISM	ENSMUSG00000026725.18	ENSMUST00000131919.2	3987	18	37499	-112	37494	112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCAAGTTTGCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	159937959	159913425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159913739_159915962_159916127_159924763_159924932_159925782_159925880_159932396_159932549_159932967_159933101_159934580_159934712_159937815
ENSMUSG00000026725.18_159913538_159942077_1	chr1	-	1327	9	ISM	ENSMUSG00000026725.18	ENSMUST00000131919.2	3987	18	33381	0	33376	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGGAAGCTGAAGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	159942077	159913537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159913739_159915962_159916127_159924763_159924932_159925782_159925880_159932396_159932549_159932967_159933101_159934580_159934712_159937815_159938080_159942060
ENSMUSG00000026725.18_159913538_159942119_1	chr1	-	1369	9	ISM	ENSMUSG00000026725.18	ENSMUST00000131919.2	3987	18	33339	0	33334	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGGAAGCTGAAGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	159942119	159913537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159913739_159915962_159916127_159924763_159924932_159925782_159925880_159932396_159932549_159932967_159933101_159934580_159934712_159937815_159938080_159942060
ENSMUSG00000026725.18_159913680_159942173_1	chr1	-	1281	9	ISM	ENSMUSG00000026725.18	ENST00000622870.4	3363	16	33280	51	33280	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCGCCCGTTTGGTTACA	NA	NA	NA	NA	NA	NA	NA	NA	159942173	159913679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159913739_159915962_159916127_159924763_159924932_159925782_159925880_159932396_159932549_159932967_159933101_159934580_159934712_159937815_159938080_159942060
ENSMUSG00000026725.18_159916071_159943672_1	chr1	-	1298	9	ISM	ENSMUSG00000026725.18	ENST00000622870.4	3363	16	31781	2442	31781	-2442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTGCCCTCAGCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	159943672	159916070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159916127_159924763_159924932_159925782_159925880_159932396_159932549_159932967_159933101_159934580_159934712_159937815_159938080_159942060_159942325_159943639
ENSMUSG00000026725.18_159924858_159943851_1	chr1	-	1327	8	ISM	ENSMUSG00000026725.18	ENST00000622870.4	3363	16	31602	11229	31602	-11229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATCTGCCTACGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	159943851	159924857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159924932_159925782_159925880_159932396_159932549_159932967_159933101_159934580_159934712_159937815_159938080_159942060_159942325_159943639
ENSMUSG00000026725.18_159932519_159946099_1	chr1	-	1277	7	ISM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	35005	19920	29354	-18890	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTCAAGTTCAGCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	159946099	159932518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159932549_159932967_159933101_159934580_159934712_159937815_159938080_159942060_159942325_159943639_159943904_159945908
ENSMUSG00000026725.18_159933060_159950287_1	chr1	-	1291	7	ISM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	30817	20461	25166	-19431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTGGAACAGGGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	159950287	159933059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159933101_159934580_159934712_159937815_159938080_159942060_159942325_159943639_159943904_159945908_159946173_159950224
ENSMUSG00000026725.18_159934681_159950421_1	chr1	-	1284	6	ISM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	30683	22082	25032	-21052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGGTAACACATTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	159950421	159934680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159934712_159937815_159938080_159942060_159942325_159943639_159943904_159945908_159946173_159950224
ENSMUSG00000026725.18_159937918_159958317_1	chr1	-	1282	6	ISM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	22787	25319	17136	-24289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCCTGACAGGCCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	159958317	159937917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159938080_159942060_159942325_159943639_159943904_159945908_159946173_159950224_159950489_159958253
ENSMUSG00000026725.18_159937979_159958375_1	chr1	-	1279	6	ISM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	22729	25380	17078	-24350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTACACCTCTGCGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	159958375	159937978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159938080_159942060_159942325_159943639_159943904_159945908_159946173_159950224_159950489_159958253
ENSMUSG00000026725.18_159938018_159958452_1	chr1	-	1317	6	ISM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	22652	25419	17001	-24389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACCCAGTGCGAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	159958452	159938017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159938080_159942060_159942325_159943639_159943904_159945908_159946173_159950224_159950489_159958253
ENSMUSG00000026725.18_159942211_159968184_1	chr1	-	1288	7	ISM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	12920	29612	7269	-28582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATGGAGAGACCAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	159968184	159942210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159942325_159943639_159943904_159945908_159946173_159950224_159950489_159958253_159958518_159966818_159966909_159968156
ENSMUSG00000026725.18_159942259_159968241_1	chr1	-	1297	7	ISM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	12863	29660	7212	-28630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGGTGCAGGCTGATATT	NA	NA	NA	NA	NA	NA	NA	NA	159968241	159942258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159942325_159943639_159943904_159945908_159946173_159950224_159950489_159958253_159958518_159966818_159966909_159968156
ENSMUSG00000026725.18_159943640_159968344_1	chr1	-	1334	6	ISM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	12760	31041	7109	-30011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATGAACAGCATGGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	159968344	159943639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159943904_159945908_159946173_159950224_159950489_159958253_159958518_159966818_159966909_159968156
ENSMUSG00000026725.18_159943757_159972623_1	chr1	-	1286	7	ISM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	8481	31158	2830	-30128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAACAGAGGAGCACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	159972623	159943756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159943904_159945908_159946173_159950224_159950489_159958253_159958518_159966818_159966909_159968156_159968343_159972552
ENSMUSG00000026725.18_159943816_159972681_1	chr1	-	1285	7	ISM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	8423	31217	2772	-30187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTATGTGGTGCGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	159972681	159943815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159943904_159945908_159946173_159950224_159950489_159958253_159958518_159966818_159966909_159968156_159968343_159972552
ENSMUSG00000026725.18_159943887_159972745_1	chr1	-	1278	7	ISM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	8359	31288	2708	-30258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGCGATCGACCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	159972745	159943886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159943904_159945908_159946173_159950224_159950489_159958253_159958518_159966818_159966909_159968156_159968343_159972552
ENSMUSG00000026725.18_159946013_159973650_1	chr1	-	1297	7	ISM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	7454	33414	1803	-32384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCCTGAGGGGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	159973650	159946012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159946173_159950224_159950489_159958253_159958518_159966818_159966909_159968156_159968343_159972552_159972817_159973581
ENSMUSG00000026725.18_159946080_159973705_1	chr1	-	1285	7	ISM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	7399	33481	1748	-32451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTCGCTACACGTCT	NA	NA	NA	NA	NA	NA	NA	NA	159973705	159946079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159946173_159950224_159950489_159958253_159958518_159966818_159966909_159968156_159968343_159972552_159972817_159973581
ENSMUSG00000026725.18_159946142_159973758_1	chr1	-	1276	7	ISM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	7346	33543	1695	-32513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTGACCGAGACCACTC	NA	NA	NA	NA	NA	NA	NA	NA	159973758	159946141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159946173_159950224_159950489_159958253_159958518_159966818_159966909_159968156_159968343_159972552_159972817_159973581
ENSMUSG00000026725.18_159950439_159975075_1	chr1	-	1288	7	ISM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	6029	37840	378	-36810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGTGTCTCCTGGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	159975075	159950438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159950489_159958253_159958518_159966818_159966909_159968156_159968343_159972552_159972817_159973581_159973957_159975016
ENSMUSG00000026725.18_159958327_159975186_1	chr1	-	1276	6	ISM	ENSMUSG00000026725.18	ENSMUST00000131919.2	3987	18	272	44789	267	-44698	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACAAAGTCTTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	159975186	159958326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159958518_159966818_159966909_159968156_159968343_159972552_159972817_159973581_159973957_159975016
ENSMUSG00000026725.18_159958398_159975255_1	chr1	-	1274	6	ISM	ENSMUSG00000026725.18	ENSMUST00000131919.2	3987	18	203	44860	198	-44769	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGACCAAGGAGAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	159975255	159958397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159958518_159966818_159966909_159968156_159968343_159972552_159972817_159973581_159973957_159975016
ENSMUSG00000026725.18_159966819_159975458_1	chr1	-	1357	5	ISM	ENSMUSG00000026725.18	ENST00000622870.4	3363	16	-5	53190	0	-53190	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGAGATCTCATCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	159975458	159966818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_159966909_159968156_159968343_159972552_159972817_159973581_159973957_159975016
ENSMUSG00000026726.11_13329966_13345142_1	chr2	-	1651	9	FSM	ENSMUSG00000026726.11	ENST00000457461.1	1652	9	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTCAATGAAATAACACG	NA	NA	NA	NA	NA	NA	NA	NA	13345142	13329965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_13330175_13331461_13331639_13336291_13336474_13337123_13337265_13338152_13338367_13339585_13339765_13340898_13341074_13344633_13344818_13344952
ENSMUSG00000026727.11_13081632_13221695_1	chr2	-	1035	3	ISM	ENSMUSG00000026727.11	ENST00000345264.10	1640	8	54136	123	7521	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTTTGTCAGGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	13221695	13081631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_13082419_13174808_13174942_13221580
ENSMUSG00000026727.11_13081823_13174942_1	chr2	-	730	2	ISM	ENSMUSG00000026727.11	ENST00000345264.10	1640	8	100889	314	54274	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCACACGTTTCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	13174942	13081822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_13082419_13174808
ENSMUSG00000026727.11_13081823_13223938_1	chr2	-	1046	5	ISM	ENSMUSG00000026727.11	ENST00000345264.10	1640	8	51893	314	5278	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCACACGTTTCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	13223938	13081822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819
ENSMUSG00000026727.11_13082257_13229215_1	chr2	-	712	6	ISM	ENSMUSG00000026727.11	ENST00000345264.10	1640	8	46616	748	1	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGAATACAGCGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	13229215	13082256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115
ENSMUSG00000026727.11_13174809_13275833_1	chr2	-	734	7	ISM	ENSMUSG00000026727.11	ENSMUST00000028059.9	1546	9	393	92986	-2	46786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAAACTCTGCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	13275833	13174808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721
ENSMUSG00000026727.11_13221581_13229282_1	chr2	-	369	3	FSM	ENSMUSG00000026727.11	ENST00000661630.1	289	3	-66	-14	-66	14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTTGCTTGTCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	13229282	13221580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_13221696_13221995_13222083_13229115
ENSMUSG00000026727.11_13221581_13276032_1	chr2	-	623	7	ISM	ENSMUSG00000026727.11	ENSMUST00000028059.9	1546	9	194	139758	112	14	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTTGCTTGTCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	13276032	13221580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
ENSMUSG00000026727.11_13221581_13276144_1	chr2	-	735	7	ISM	ENSMUSG00000026727.11	ENSMUST00000028059.9	1546	9	82	139758	0	14	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTTGCTTGTCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	13276144	13221580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
ENSMUSG00000026728.10_13578763_13583287_1	chr2	+	1168	3	ISM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	0	4350	0	-4349	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGCCTTTTTGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	13578762	13583287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_13579806_13580351_13580413_13583223
ENSMUSG00000026728.10_13579133_13584357_1	chr2	+	1118	5	ISM	ENSMUSG00000026728.10	ENSMUST00000193675.2	1777	8	41	3279	41	-3279	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTACTACAGCAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	13579132	13584357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231
ENSMUSG00000026728.10_13579334_13585494_1	chr2	+	1182	7	ISM	ENSMUSG00000026728.10	ENSMUST00000193675.2	1777	8	242	2142	242	-2142	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACATTGTTTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	13579333	13585494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450
ENSMUSG00000026728.10_13579489_13586474_1	chr2	+	1078	8	ISM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	726	1163	397	-1162	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGATTAAGACGGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	13579488	13586474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423
ENSMUSG00000026728.10_13579619_13587289_1	chr2	+	989	9	FSM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	856	348	527	-347	multi-exon	FALSE	canonical	NA	NA	NA	NA	3612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGACTTCTCAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	13579618	13587289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
ENSMUSG00000026728.10_13579667_13587434_1	chr2	+	1086	9	FSM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	904	203	575	-202	multi-exon	FALSE	canonical	NA	NA	NA	NA	10290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAGATTTGGAATAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	13579666	13587434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
ENSMUSG00000026728.10_13579717_13587485_1	chr2	+	1087	9	FSM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	954	152	625	-151	multi-exon	FALSE	canonical	NA	NA	NA	NA	12009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACGTAGAAAAGGTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	13579716	13587485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
ENSMUSG00000026728.10_13579762_13587636_1	chr2	+	1193	9	FSM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	999	1	670	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTGGTGTGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	13579761	13587636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
ENSMUSG00000026728.10_13580352_13587637_1	chr2	+	1150	8	ISM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	1589	0	1260	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGTGTGTTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	13580351	13587637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
ENSMUSG00000026740.13_18221719_18312803_1	chr2	-	1463	8	ISM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	84838	3159	84819	-3159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGAGAAATTTAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	18312803	18221718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725
ENSMUSG00000026749.12_38440564_38476007_1	chr2	+	1577	9	ISM	ENSMUSG00000026749.12	ENST00000546191.5	2020	10	1	607	1	229	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTAGGATCAGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	38440563	38476007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ENSMUSG00000026749.12_38440591_38476082_1	chr2	+	1625	9	ISM	ENSMUSG00000026749.12	ENST00000540326.5	2016	10	24	532	24	304	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2012	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTTCGGGGTCTGGATC	NA	NA	NA	NA	NA	NA	NA	NA	38440590	38476082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ENSMUSG00000026749.12_38440620_38476078_1	chr2	+	1592	9	ISM	ENSMUSG00000026749.12	ENST00000540326.5	2016	10	53	536	53	300	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1755	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACAAGTTCGGGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	38440619	38476078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ENSMUSG00000026749.12_38440657_38476118_1	chr2	+	1595	9	ISM	ENSMUSG00000026749.12	ENST00000540326.5	2016	10	90	496	90	340	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2098	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTGTTGGCCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	38440656	38476118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ENSMUSG00000026749.12_38447930_38476418_1	chr2	+	1601	9	ISM	ENSMUSG00000026749.12	ENST00000540326.5	2016	10	7363	196	7363	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2648	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTGTCACCCCTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	38447929	38476418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291_38476210_38476374
ENSMUSG00000026749.12_38450891_38476614_1	chr2	+	1697	7	ISM	ENSMUSG00000026749.12	ENST00000540326.5	2016	10	10324	0	10324	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4028	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTATTCCAGTGGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	38450890	38476614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291_38476210_38476374
ENSMUSG00000026749.12_38458857_38476614_1	chr2	+	1586	6	ISM	ENSMUSG00000026749.12	ENST00000540326.5	2016	10	18290	0	18290	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3044	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTATTCCAGTGGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	38458856	38476614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291_38476210_38476374
ENSMUSG00000026749.12_38475694_38476614_1	chr2	+	754	2	NNC	ENSMUSG00000026749.12	novel	2020	10	NA	NA	35127	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTATTCCAGTGGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	38475693	38476614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_38476210_38476376
ENSMUSG00000026750.7_38478048_38533932_1	chr2	-	990	8	NNC	ENSMUSG00000026750.7	novel	1160	8	NA	NA	167	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	38533932	38478047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523971_38530079_38530226_38532189_38532288_38533369_38533464_38533852
ENSMUSG00000026750.7_38478048_38533932_2	chr2	-	986	8	NNC	ENSMUSG00000026750.7	novel	1160	8	NA	NA	167	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	38533932	38478047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_38478301_38480708_38480854_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
ENSMUSG00000026750.7_38478048_38533932_3	chr2	-	986	8	NNC	ENSMUSG00000026750.7	novel	1160	8	NA	NA	167	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	38533932	38478047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533376_38533464_38533852
ENSMUSG00000026750.7_38478048_38533956_1	chr2	-	1017	8	FSM	ENSMUSG00000026750.7	ENSMUST00000028083.6	1160	8	143	0	143	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	38533956	38478047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
ENSMUSG00000026750.7_38478048_38534099_1	chr2	-	1157	8	NNC	ENSMUSG00000026750.7	novel	1160	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	38534099	38478047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523971_38530079_38530226_38532189_38532288_38533369_38533464_38533852
ENSMUSG00000026750.7_38478048_38534099_2	chr2	-	1153	8	NNC	ENSMUSG00000026750.7	novel	1160	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	38534099	38478047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533859
ENSMUSG00000026750.7_38478048_38534099_3	chr2	-	1153	8	NNC	ENSMUSG00000026750.7	novel	1160	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	38534099	38478047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533376_38533464_38533852
ENSMUSG00000026750.7_38478048_38534099_4	chr2	-	1153	8	NNC	ENSMUSG00000026750.7	novel	1160	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	38534099	38478047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_38478301_38480708_38480854_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
ENSMUSG00000026753.6_39087177_39089747_1	chr2	-	498	2	ISM	ENSMUSG00000026753.6	ENSMUST00000204701.3	1495	6	26585	388	26585	-388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCAGTTTTGTCACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	39089747	39087176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_39087602_39089674
ENSMUSG00000026753.6_39087241_39089816_1	chr2	-	503	2	ISM	ENSMUSG00000026753.6	ENSMUST00000204701.3	1495	6	26516	452	26516	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTTAATTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	39089816	39087240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_39087602_39089674
ENSMUSG00000026753.6_39087293_39089884_1	chr2	-	519	2	ISM	ENSMUSG00000026753.6	ENSMUST00000204701.3	1495	6	26448	504	26448	-504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACAATATACTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	39089884	39087292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_39087602_39089674
ENSMUSG00000026753.6_39087394_39090133_1	chr2	-	498	3	ISM	ENSMUSG00000026753.6	ENSMUST00000204701.3	1495	6	26199	605	26199	-605	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTATTCCTCCCAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	39090133	39087393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_39087602_39089674_39089885_39090053
ENSMUSG00000026753.6_39087509_39094986_1	chr2	-	525	4	ISM	ENSMUSG00000026753.6	ENSMUST00000204701.3	1495	6	21346	720	21346	-720	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTCTGCTCCTAACTA	NA	NA	NA	NA	NA	NA	NA	NA	39094986	39087508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844
ENSMUSG00000026755.15_38898088_38905889_2	chr2	+	1333	4	NNC	ENSMUSG00000026755.15	novel	1339	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGGCTTCAAAAGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	38898087	38905889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_38898359_38903128_38903194_38903734_38903912_38905069
ENSMUSG00000026755.15_38898088_38905889_3	chr2	+	1332	4	NNC	ENSMUSG00000026755.15	novel	1339	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGGCTTCAAAAGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	38898087	38905889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_38898357_38903126_38903200_38903734_38903912_38905076
ENSMUSG00000026761.13_48794476_48800264_1	chr2	-	1367	4	ISM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	39024	1640	38982	946	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGTGACCTTGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	48800264	48794475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197
ENSMUSG00000026761.13_48794707_48807262_1	chr2	-	1351	6	ISM	ENSMUSG00000026761.13	ENST00000264169.6	1458	14	32845	-715	31984	715	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCAGCGTCCACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	48807262	48794706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176
ENSMUSG00000026761.13_48794892_48819741_1	chr2	-	1455	8	ISM	ENSMUSG00000026761.13	ENST00000264169.6	1458	14	20366	-530	19505	530	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATCTCACCACAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	48819741	48794891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692
ENSMUSG00000026761.13_48795043_48823152_1	chr2	-	1365	9	ISM	ENSMUSG00000026761.13	ENST00000264169.6	1458	14	16955	-379	16094	379	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTTGATTTTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	48823152	48795042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091
ENSMUSG00000026761.13_48795214_48826862_1	chr2	-	1371	11	ISM	ENSMUSG00000026761.13	ENST00000264169.6	1458	14	13245	-208	12384	208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTCCATAAAATGATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	48826862	48795213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783
ENSMUSG00000026761.13_48795426_48839244_1	chr2	-	1432	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	44	2590	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGATTTTAAGTACATTT	NA	NA	NA	NA	NA	NA	NA	NA	48839244	48795425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ENSMUSG00000026761.13_48795426_48840051_1	chr2	-	1398	14	FSM	ENSMUSG00000026761.13	ENST00000264169.6	1458	14	56	4	56	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGATTTTAAGTACATTT	NA	NA	NA	NA	NA	NA	NA	NA	48840051	48795425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839969
ENSMUSG00000026765.13_49756674_49838033_1	chr2	+	1049	5	FSM	ENSMUSG00000026765.13	ENST00000409876.5	1049	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	723	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCATTACCGTAATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	49756673	49838033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_49756739_49832456_49832609_49833533_49833633_49836091_49836223_49837431
ENSMUSG00000026766.17_50170077_50178955_1	chr2	-	655	4	ISM	ENSMUSG00000026766.17	ENST00000422782.2	1246	6	4010	139	4010	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTTTCAGAATTGCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	50178955	50170076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_50170415_50171114_50171229_50177751_50177938_50178938
ENSMUSG00000026766.17_50170130_50179005_1	chr2	-	652	4	ISM	ENSMUSG00000026766.17	ENST00000422782.2	1246	6	3960	192	3960	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCTAGGTATTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	50179005	50170129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_50170415_50171114_50171229_50177751_50177938_50178938
ENSMUSG00000026766.17_50170190_50179047_1	chr2	-	634	4	ISM	ENSMUSG00000026766.17	ENST00000422782.2	1246	6	3918	252	3918	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTCATGGATTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	50179047	50170189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_50170415_50171114_50171229_50177751_50177938_50178938
ENSMUSG00000026766.17_50170362_50181514_1	chr2	-	677	5	ISM	ENSMUSG00000026766.17	ENST00000422782.2	1246	6	1451	424	1451	-424	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTAGGATTCTCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	50181514	50170361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_50170415_50171114_50171229_50177751_50177938_50178938_50179045_50181296
ENSMUSG00000026766.17_50170362_50182853_1	chr2	-	710	6	FSM	ENSMUSG00000026766.17	ENST00000422782.2	1246	6	112	424	112	-424	multi-exon	FALSE	canonical	NA	NA	NA	NA	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTAGGATTCTCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	50182853	50170361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_50170415_50171114_50171229_50177751_50177938_50178938_50179045_50181296_50181515_50182820
ENSMUSG00000026766.17_50171153_50182965_1	chr2	-	731	5	ISM	ENSMUSG00000026766.17	ENST00000422782.2	1246	6	0	1215	0	-1215	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGCTGACTTCATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	50182965	50171152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_50171229_50177751_50177938_50178938_50179045_50181296_50181515_50182820
ENSMUSG00000026767.13_12352074_12424109_4	chr2	-	2172	15	FSM	ENSMUSG00000026767.13	ENSMUST00000028105.13	2344	15	172	0	172	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCACTTTTACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	12424109	12352073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
ENSMUSG00000026775.10_23046381_23088729_1	chr2	+	4164	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	0	543	0	-543	multi-exon	TRUE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAAGATCACACTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	23046380	23088729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUSG00000026775.10_23046530_23088754_1	chr2	+	4040	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	149	518	149	-518	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGAGTAGCCAACAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	23046529	23088754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUSG00000026775.10_23046530_23088762_1	chr2	+	4048	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	149	510	149	-510	multi-exon	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAACAGTTTTAGGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	23046529	23088762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUSG00000026775.10_23046530_23088775_1	chr2	+	4061	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	149	497	149	-497	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTAGTAAGCGGCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	23046529	23088775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUSG00000026775.10_23046540_23088840_1	chr2	+	4116	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	159	432	159	-432	multi-exon	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGTGAAATGAGGATAAG	NA	NA	NA	NA	NA	NA	NA	NA	23046539	23088840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUSG00000026775.10_23046540_23088876_1	chr2	+	4152	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	159	396	159	-396	multi-exon	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGGTGGGTTCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	23046539	23088876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUSG00000026775.10_23046655_23088936_1	chr2	+	4097	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	274	336	274	-336	multi-exon	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGAAAGTTCTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	23046654	23088936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUSG00000026775.10_23050206_23088998_1	chr2	+	4068	18	ISM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	3825	274	4	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTGCATCATTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	23050205	23088998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUSG00000026775.10_23050243_23089065_1	chr2	+	4098	18	ISM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	3862	207	41	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTAGGAGCTGCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	23050242	23089065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUSG00000026775.10_23050280_23082440_1	chr2	+	1448	13	ISM	ENSMUSG00000026775.10	ENST00000375972.7	2139	18	78	4498	78	-4498	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGAGGGACTGTTGGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	23050279	23082440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_23050463_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418
ENSMUSG00000026775.10_23050294_23089117_1	chr2	+	4099	18	ISM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	3913	155	92	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAATTTAGTGATTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	23050293	23089117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUSG00000026775.10_23050333_23082496_1	chr2	+	1451	13	ISM	ENSMUSG00000026775.10	ENST00000375972.7	2139	18	131	4442	131	-4442	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAAGGCAGCAGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	23050332	23082496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_23050463_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418
ENSMUSG00000026775.10_23050396_23082536_1	chr2	+	1428	13	ISM	ENSMUSG00000026775.10	ENST00000375972.7	2139	18	194	4402	194	-4402	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAACTAGAGTTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	23050395	23082536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_23050463_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418
ENSMUSG00000026775.10_23052585_23089272_1	chr2	+	4140	17	ISM	ENSMUSG00000026775.10	ENST00000375972.7	2139	18	2383	-2334	2383	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATTCCAACTGAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	23052584	23089272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUSG00000026779.7_23008172_23030067_1	chr2	-	2097	6	ISM	ENSMUSG00000026779.7	ENST00000342386.10	2765	11	15817	0	15817	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAACACTACCACTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	23030067	23008171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_23008605_23010468_23010571_23021691_23021831_23022636_23023728_23026871_23027056_23029919
ENSMUSG00000026779.7_23008372_23035444_1	chr2	-	2073	8	ISM	ENSMUSG00000026779.7	ENST00000342386.10	2765	11	10440	200	10440	-200	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTCTAAATGGGATAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	23035444	23008371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_23008605_23010468_23010571_23021691_23021831_23022636_23023728_23026871_23027056_23029919_23030068_23030510_23030618_23035375
ENSMUSG00000026779.7_23008476_23036107_1	chr2	-	2043	9	ISM	ENSMUSG00000026779.7	ENST00000342386.10	2765	11	9777	304	9777	-304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGACCATATCTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	23036107	23008475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_23008605_23010468_23010571_23021691_23021831_23022636_23023728_23026871_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053
ENSMUSG00000026779.7_23008535_23036149_1	chr2	-	2026	9	ISM	ENSMUSG00000026779.7	ENST00000342386.10	2765	11	9735	363	9735	-363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCCAACCAGACGACGAAA	NA	NA	NA	NA	NA	NA	NA	NA	23036149	23008534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_23008605_23010468_23010571_23021691_23021831_23022636_23023728_23026871_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053
ENSMUSG00000026779.7_23010469_23041139_1	chr2	-	2140	9	ISM	ENSMUSG00000026779.7	ENST00000342386.10	2765	11	4745	2297	4745	-2297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGTTTTGTCAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	23041139	23010468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_23010571_23021691_23021831_23022636_23023728_23026871_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999
ENSMUSG00000026779.7_23021712_23045712_1	chr2	-	2038	9	ISM	ENSMUSG00000026779.7	ENST00000342386.10	2765	11	172	13540	172	-13540	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTGGGTACAGCCCATG	NA	NA	NA	NA	NA	NA	NA	NA	23045712	23021711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_23021831_23022636_23023728_23026871_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ENSMUSG00000026779.7_23021762_23045773_1	chr2	-	2049	9	ISM	ENSMUSG00000026779.7	ENST00000342386.10	2765	11	111	13590	111	-13590	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGATGACGGGCGAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	23045773	23021761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_23021831_23022636_23023728_23026871_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ENSMUSG00000026779.7_23021813_23045909_1	chr2	-	2134	9	ISM	ENSMUSG00000026779.7	ENST00000342386.10	2765	11	-25	13641	-25	-13641	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGGAACATCATACAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	23045909	23021812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_23021831_23022636_23023728_23026871_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ENSMUSG00000026781.18_22959339_22979800_1	chr2	+	935	6	ISM	ENSMUSG00000026781.18	ENST00000676997.1	1541	11	-123	20977	0	-20975	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTCCTCACGTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	22959338	22979800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602
ENSMUSG00000026781.18_22959463_23000683_1	chr2	+	1479	12	FSM	ENSMUSG00000026781.18	ENST00000375888.5	1596	12	25	92	0	-92	multi-exon	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGATGTCCCCTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	22959462	23000683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22970679_22970713_22977496_22977632_22979602_22979801_22980487_22980595_22984261_22984530_22989576_22989777_23000256_23000299_23000665
ENSMUSG00000026781.18_22959463_23000735_1	chr2	+	1531	12	FSM	ENSMUSG00000026781.18	ENST00000375888.5	1596	12	25	40	0	-40	multi-exon	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGGTTGGCACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	22959462	23000735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22970679_22970713_22977496_22977632_22979602_22979801_22980487_22980595_22984261_22984530_22989576_22989777_23000256_23000299_23000665
ENSMUSG00000026781.18_22959463_23000779_1	chr2	+	1542	11	FSM	ENSMUSG00000026781.18	ENST00000676997.1	1541	11	1	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTAGTTTTCTACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	22959462	23000779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984261_22984530_22989576_22989777_23000256_23000299_23000665
ENSMUSG00000026781.18_22959463_23000779_2	chr2	+	1537	11	NNC	ENSMUSG00000026781.18	novel	1541	11	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTAGTTTTCTACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	22959462	23000779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979607_22979801_22980487_22980595_22984261_22984530_22989576_22989777_23000256_23000299_23000665
ENSMUSG00000026781.18_22959607_23000775_1	chr2	+	1427	12	FSM	ENSMUSG00000026781.18	ENST00000375888.5	1596	12	169	0	144	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACTCTAGTTTTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	22959606	23000775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22970679_22970713_22977496_22977632_22979602_22979801_22980487_22980595_22984261_22984530_22989576_22989777_23000256_23000299_23000665
ENSMUSG00000026781.18_22977568_23002536_1	chr2	+	910	6	ISM	ENSMUSG00000026781.18	ENST00000677311.1	2555	10	18295	906	18105	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTTACTCAAGAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	22977567	23002536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_22977632_22979602_22979801_22980487_22980595_22984261_22984530_22989576_22989802_23002488
ENSMUSG00000026781.18_22979615_23002693_1	chr2	+	991	5	ISM	ENSMUSG00000026781.18	ENST00000677311.1	2555	10	20342	749	20152	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACATTTTAAAGACTAAT	NA	NA	NA	NA	NA	NA	NA	NA	22979614	23002693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_22979801_22980487_22980595_22984261_22984530_22989576_22989802_23002488
ENSMUSG00000026781.18_22984384_23003023_1	chr2	+	906	3	ISM	ENSMUSG00000026781.18	ENST00000677311.1	2555	10	25111	419	24921	106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTCCAGGAGACTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	22984383	23003023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_22984530_22989576_22989802_23002488
ENSMUSG00000026781.18_22989602_23003188_1	chr2	+	900	2	ISM	ENSMUSG00000026781.18	ENST00000677311.1	2555	10	30329	254	30139	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTATTCAAACTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	22989601	23003188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_22989802_23002488
ENSMUSG00000026781.18_22989675_23003357_1	chr2	+	996	2	ISM	ENSMUSG00000026781.18	ENST00000677311.1	2555	10	30402	85	30212	-85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGATAATCCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	22989674	23003357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_22989802_23002488
ENSMUSG00000026781.18_22989739_23003357_1	chr2	+	932	2	ISM	ENSMUSG00000026781.18	ENST00000677311.1	2555	10	30466	85	30276	-85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGATAATCCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	22989738	23003357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_22989802_23002488
ENSMUSG00000026785.15_29979902_29981025_1	chr2	+	772	4	ISM	ENSMUSG00000026785.15	ENSMUST00000045246.8	3113	22	11306	6	11306	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCCAGGGGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	29979901	29981025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29979994_29980079_29980188_29980342_29980424_29980534
ENSMUSG00000026790.20_29779837_29812373_1	chr2	+	2120	17	FSM	ENSMUSG00000026790.20	ENSMUST00000113755.8	2305	17	7	178	6	-175	multi-exon	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAGCCGGGTAAGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	29779836	29812373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ENSMUSG00000026790.20_29780075_29792258_1	chr2	+	546	5	ISM	ENSMUSG00000026790.20	ENST00000546203.5	2134	16	-2	20290	0	-20290	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGGTGGCACACGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	29780074	29792258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29780224_29782197_29782289_29783455_29783525_29791088_29791260_29792192
ENSMUSG00000026790.20_29780168_29792321_1	chr2	+	516	5	ISM	ENSMUSG00000026790.20	ENST00000546203.5	2134	16	91	20227	0	-20227	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCGTATCAAGGAGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	29780167	29792321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29780224_29782197_29782289_29783455_29783525_29791088_29791260_29792192
ENSMUSG00000026790.20_29783012_29812551_1	chr2	+	2111	15	ISM	ENSMUSG00000026790.20	ENSMUST00000113755.8	2305	17	3182	0	2460	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCGTGTTGCACAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	29783011	29812551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ENSMUSG00000026790.20_29810785_29812551_1	chr2	+	545	3	ISM	ENSMUSG00000026790.20	ENSMUST00000113764.4	2450	16	30233	-3	30233	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCGTGTTGCACAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	29810784	29812551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29810898_29811015_29811121_29812224
ENSMUSG00000026790.20_29810848_29820539_1	chr2	+	762	7	ISM	ENSMUSG00000026790.20	ENST00000604420.5	2807	21	31017	140	30296	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTACCAACCGCAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	29810847	29820539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ENSMUSG00000026791.15_32863002_32866894_1	chr2	-	1335	6	ISM	ENSMUSG00000026791.15	ENSMUST00000028129.13	2108	10	5200	0	5135	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTTCAGTGGAGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	32866894	32863001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872
ENSMUSG00000026791.15_32863002_32866967_1	chr2	-	1408	6	ISM	ENSMUSG00000026791.15	ENSMUST00000028129.13	2108	10	5127	0	5062	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTTCAGTGGAGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	32866967	32863001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872
ENSMUSG00000026791.15_32863002_32867044_1	chr2	-	1485	6	ISM	ENSMUSG00000026791.15	ENSMUST00000028129.13	2108	10	5050	0	4985	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTTCAGTGGAGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	32867044	32863001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872
ENSMUSG00000026791.15_32863195_32870092_1	chr2	-	1399	7	ISM	ENSMUSG00000026791.15	ENSMUST00000028129.13	2108	10	2002	193	1937	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGTAGAAGAGAGAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	32870092	32863194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013
ENSMUSG00000026791.15_32863432_32871579_1	chr2	-	1390	8	ISM	ENSMUSG00000026791.15	ENSMUST00000028129.13	2108	10	515	430	450	165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGAGTGCGGTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	32871579	32863431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372
ENSMUSG00000026791.15_32863597_32872029_1	chr2	-	1448	10	FSM	ENSMUSG00000026791.15	ENSMUST00000028129.13	2108	10	65	595	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCCTGGGAGCCCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	32872029	32863596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871580_32871732_32871896_32871969
ENSMUSG00000026792.17_32816880_32828862_1	chr2	-	718	8	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	20741	92	20741	-92	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCAGCAGTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	32828862	32816879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32826447_32826523_32828808
ENSMUSG00000026792.17_32817996_32830353_1	chr2	-	820	8	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	19250	1208	19250	-1208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTGGGGAGACACCAA	NA	NA	NA	NA	NA	NA	NA	NA	32830353	32817995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32826447_32826523_32828808_32828897_32830252
ENSMUSG00000026792.17_32818108_32831841_1	chr2	-	734	9	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	17762	1320	17762	-1320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAGCCCCCCACAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	32831841	32818107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32826447_32826523_32828808_32828897_32830252_32830353_32831814
ENSMUSG00000026792.17_32818122_32825194_1	chr2	-	346	5	ISM	ENSMUSG00000026792.17	ENST00000675141.1	2493	24	26244	1334	24409	-1334	internal_fragment	TRUE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTTGGTGCCCTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	32825194	32818121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32818143_32818663_32818746_32819585_32819718_32823826_32823923_32825179
ENSMUSG00000026792.17_32818664_32828896_1	chr2	-	653	7	ISM	ENSMUSG00000026792.17	ENST00000675213.1	2142	23	20707	1876	20707	-1876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGACTCTAAGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	32828896	32818663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808
ENSMUSG00000026792.17_32818664_32834767_1	chr2	-	794	9	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	14836	1876	14836	-1876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGACTCTAAGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	32834767	32818663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716
ENSMUSG00000026792.17_32819603_32830352_1	chr2	-	654	7	ISM	ENSMUSG00000026792.17	ENST00000675213.1	2142	23	19251	2815	19251	-2815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGAGATCTGGCTAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	32830352	32819602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252
ENSMUSG00000026792.17_32819603_32835551_1	chr2	-	787	9	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	14052	2815	14052	-2815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGAGATCTGGCTAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	32835551	32819602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32819718_32822102_32822202_32823826_32823923_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453
ENSMUSG00000026792.17_32822102_32831885_1	chr2	-	611	7	ISM	ENSMUSG00000026792.17	ENST00000675213.1	2142	23	17718	5314	17718	-5314	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGACCGTGGTACTCATC	NA	NA	NA	NA	NA	NA	NA	NA	32831885	32822101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814
ENSMUSG00000026792.17_32822155_32835917_1	chr2	-	717	9	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	13686	5367	13686	-5367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAGTACCAACGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	32835917	32822154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32822202_32823826_32823923_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862
ENSMUSG00000026792.17_32823826_32835593_1	chr2	-	697	8	ISM	ENSMUSG00000026792.17	ENST00000675213.1	2142	23	14010	7038	14010	-7038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCCGTGGGCTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	32835593	32823825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453
ENSMUSG00000026792.17_32823889_32837873_1	chr2	-	777	10	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	11730	7101	11730	-7101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTCCAGCAGCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	32837873	32823888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32823923_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802
ENSMUSG00000026792.17_32825244_32835924_1	chr2	-	598	8	ISM	ENSMUSG00000026792.17	ENST00000675213.1	2142	23	13679	8456	13679	-8456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTACTGCAGCTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	32835924	32825243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862
ENSMUSG00000026792.17_32828809_32841195_1	chr2	-	819	9	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	8408	12021	8408	-12021	internal_fragment	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCCTTTGCCTGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	32841195	32828808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104
ENSMUSG00000026792.17_32830310_32843422_1	chr2	-	721	9	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	6181	13522	6181	-13522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAGATGGCCTATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	32843422	32830309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375
ENSMUSG00000026792.17_32834717_32844298_1	chr2	-	767	8	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	5305	17929	5305	-17929	internal_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGGCCTCTGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	32844298	32834716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213
ENSMUSG00000026792.17_32835453_32845261_1	chr2	-	792	8	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	4342	18665	4342	-18665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCCTGGCCAGCCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	32845261	32835452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192
ENSMUSG00000026792.17_32835576_32846547_1	chr2	-	730	9	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	3056	18788	3056	-18788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACCTGAGCGAGCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	32846547	32835575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486
ENSMUSG00000026792.17_32835862_32847311_1	chr2	-	768	8	NNC	ENSMUSG00000026792.17	novel	2106	23	NA	NA	2292	-19074	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGCCGCACAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	32847311	32835861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_32836003_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260
ENSMUSG00000026792.17_32835862_32847311_2	chr2	-	781	9	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	2292	19074	2292	-19074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGCCGCACAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	32847311	32835861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260
ENSMUSG00000026792.17_32836113_32849553_1	chr2	-	724	10	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	50	19325	50	-19325	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGGAAGGTAAGGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	32849553	32836112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528
ENSMUSG00000026792.17_32837803_32848227_1	chr2	-	634	7	ISM	ENSMUSG00000026792.17	ENST00000675213.1	2142	23	1376	21015	1376	-21015	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGAGCTGCCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	32848227	32837802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32848169
ENSMUSG00000026796.17_32766126_32812119_1	chr2	+	1436	10	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	0	3147	0	-3147	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGCAGAGCTGCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	32766125	32812119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080
ENSMUSG00000026796.17_32766265_32812594_1	chr2	+	1439	11	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	139	2672	139	-2672	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAAACCCTCCTGCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	32766264	32812594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569
ENSMUSG00000026796.17_32766309_32812662_1	chr2	+	1463	11	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	183	2604	183	-2604	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGATTCTAGAGCGCGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	32766308	32812662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569
ENSMUSG00000026796.17_32795806_32812959_1	chr2	+	1446	11	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	29680	2307	29680	-2307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACCTGCAAGTCGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	32795805	32812959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867
ENSMUSG00000026796.17_32799962_32813489_1	chr2	+	1414	12	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	33836	1777	33836	-1777	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGGTTCTGCACAATAG	NA	NA	NA	NA	NA	NA	NA	NA	32799961	32813489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ENSMUSG00000026796.17_32801424_32813651_1	chr2	+	1477	11	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	35298	1615	35298	-1615	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCCAAGCAGGTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	32801423	32813651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ENSMUSG00000026796.17_32809045_32813834_1	chr2	+	1417	9	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	42919	1432	42919	-1432	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAGAGCTCCCAACCCGT	NA	NA	NA	NA	NA	NA	NA	NA	32809044	32813834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ENSMUSG00000026796.17_32809098_32813882_1	chr2	+	1412	9	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	42972	1384	42972	-1384	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCCCTCCGGCATCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	32809097	32813882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ENSMUSG00000026796.17_32809789_32814099_1	chr2	+	1427	7	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	43663	1167	43663	-1167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCACCTCTGGGGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	32809788	32814099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ENSMUSG00000026796.17_32809839_32814155_1	chr2	+	1433	7	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	43713	1111	43713	-1111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTGGCATCTCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	32809838	32814155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ENSMUSG00000026796.17_32811051_32814269_1	chr2	+	1422	6	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	44925	997	44925	-997	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCCTCTTTGTGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	32811050	32814269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ENSMUSG00000026796.17_32811095_32814328_1	chr2	+	1437	6	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	44969	938	44969	-938	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGCAGATGAAAGCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	32811094	32814328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ENSMUSG00000026796.17_32812155_32814476_1	chr2	+	1453	5	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	46029	790	46029	-790	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCCTCACTTTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	32812154	32814476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ENSMUSG00000026796.17_32812661_32814618_1	chr2	+	1422	4	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	46535	648	46535	-648	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGGAGCTTGGGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	32812660	32814618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32812687_32812867_32812976_32813058_32813171_32813442
ENSMUSG00000026796.17_32812954_32814730_1	chr2	+	1422	3	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	46828	536	46828	-536	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTAGCTGTGGGCTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	32812953	32814730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32812976_32813058_32813171_32813442
ENSMUSG00000026796.17_32813153_32814837_1	chr2	+	1413	2	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	47027	429	47027	-429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGTCACCTAATCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	32813152	32814837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32813171_32813442
ENSMUSG00000026797.17_32678231_32686136_1	chr2	-	1528	2	ISM	ENSMUSG00000026797.17	ENSMUST00000050000.16	3892	19	51121	617	51078	-258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCTTCTCCCATCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	32686136	32678230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32679650_32686027
ENSMUSG00000026797.17_32678404_32690668_1	chr2	-	1564	4	ISM	ENSMUSG00000026797.17	ENSMUST00000050000.16	3892	19	46589	790	46546	-431	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGCTGTCTTCGCAAACG	NA	NA	NA	NA	NA	NA	NA	NA	32690668	32678403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32679650_32686027_32686183_32688116_32688203_32690591
ENSMUSG00000026797.17_32678653_32692876_1	chr2	-	1561	6	ISM	ENSMUSG00000026797.17	ENSMUST00000050000.16	3892	19	44381	1039	44338	-680	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTGTATGAAAAGGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	32692876	32678652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32679650_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765
ENSMUSG00000026797.17_32690591_32737218_1	chr2	-	1577	16	ISM	ENSMUSG00000026797.17	ENSMUST00000077458.7	3616	20	-4	12618	-4	-12618	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTGGGGTTCAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	32737218	32690590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32696799_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713547_32713598_32737066
ENSMUSG00000026799.16_29237006_29412863_1	chr2	+	544	6	ISM	ENSMUSG00000026799.16	ENST00000357028.6	843	7	166	1648	166	-1648	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGCCTTCCAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	29237005	29412863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29399434_29399477_29412785
ENSMUSG00000026799.16_29237027_29390279_1	chr2	+	452	5	ISM	ENSMUSG00000026799.16	ENSMUST00000028139.11	1254	8	196	24526	187	-24232	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCGATCGCACGATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	29237026	29390279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29390230
ENSMUSG00000026799.16_29239854_29412863_1	chr2	+	602	6	ISM	ENSMUSG00000026799.16	ENSMUST00000028139.11	1254	8	3023	1942	3014	-1648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGCCTTCCAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	29239853	29412863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29240003_29303399_29303531_29361304_29361399_29390230_29390339_29399434_29399477_29412785
ENSMUSG00000026799.16_29239854_29414437_1	chr2	+	553	6	ISM	ENSMUSG00000026799.16	ENST00000357028.6	843	7	3014	74	3014	-74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAAGATGGCCTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	29239853	29414437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29240003_29303399_29303531_29361304_29361399_29399434_29399477_29412785_29412864_29414378
ENSMUSG00000026799.16_29361305_29414567_1	chr2	+	511	5	ISM	ENSMUSG00000026799.16	ENSMUST00000028139.11	1254	8	124474	238	124465	56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCGACCCATTCACCACA	NA	NA	NA	NA	NA	NA	NA	NA	29361304	29414567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29361399_29390230_29390339_29399434_29399477_29412785_29412864_29414378
ENSMUSG00000026799.16_29412784_29414805_1	chr2	+	507	2	ISM	ENSMUSG00000026799.16	ENSMUST00000028139.11	1254	8	175953	0	175944	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGTGTTCTGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	29412783	29414805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29412864_29414378
ENSMUSG00000026803.18_28959917_28974760_1	chr2	+	972	8	ISM	ENSMUSG00000026803.18	ENSMUST00000100237.4	4160	12	9643	2908	15	1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2734	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTGTTCAAAGACATCT	NA	NA	NA	NA	NA	NA	NA	NA	28959916	28974760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648
ENSMUSG00000026803.18_28959917_28974760_2	chr2	+	967	8	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2008	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTGTTCAAAGACATCT	NA	NA	NA	NA	NA	NA	NA	NA	28959916	28974760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28969405_28969491_28971023_28971090_28973544_28973631_28974648
ENSMUSG00000026803.18_28959917_28974760_3	chr2	+	965	8	NNC	ENSMUSG00000026803.18	novel	990	8	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2054	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTGTTCAAAGACATCT	NA	NA	NA	NA	NA	NA	NA	NA	28959916	28974760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_28960094_28961309_28961389_28963911_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648
ENSMUSG00000026803.18_28959970_28974760_1	chr2	+	919	8	ISM	ENSMUSG00000026803.18	ENSMUST00000100237.4	4160	12	9696	2908	68	1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1592	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTGTTCAAAGACATCT	NA	NA	NA	NA	NA	NA	NA	NA	28959969	28974760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648
ENSMUSG00000026806.16_28748775_28795328_1	chr2	+	1922	11	ISM	ENSMUSG00000026806.16	ENSMUST00000113853.3	3271	20	18304	255	18304	-255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATAGCACCATGTGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	28748774	28795328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ENSMUSG00000026809.16_28582096_28583842_1	chr2	-	583	3	ISM	ENSMUSG00000026809.16	ENST00000356311.10	725	4	2223	-1	2223	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTGGCTTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	28583842	28582095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_28582130_28582729_28583072_28583635
ENSMUSG00000026809.16_28582096_28586011_1	chr2	-	672	4	FSM	ENSMUSG00000026809.16	ENST00000356311.10	725	4	54	-1	54	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTGGCTTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	28586011	28582095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_28582130_28582729_28583072_28583635_28583839_28585918
ENSMUSG00000026809.16_28582729_28586011_1	chr2	-	639	3	ISM	ENSMUSG00000026809.16	ENST00000356311.10	725	4	54	632	54	-632	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGTACTTGGCTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	28586011	28582728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_28583072_28583635_28583839_28585918
ENSMUSG00000026810.13_32461217_32462989_1	chr2	+	213	3	ISM	ENSMUSG00000026810.13	ENSMUST00000028151.7	869	4	347	602	347	-586	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCTGAAGAGCCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	32461216	32462989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32461308_32462308_32462412_32462970
ENSMUSG00000026811.19_32497055_32509805_1	chr2	+	1345	7	FSM	ENSMUSG00000026811.19	ENST00000291839.10	1973	7	3	625	3	264	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTATAGGGGTCTTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	32497054	32509805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32497124_32498053_32498109_32499237_32499329_32502235_32502416_32504792_32505181_32508508_32508617_32509351
ENSMUSG00000026811.19_32498097_32510630_1	chr2	+	2206	6	ISM	ENSMUSG00000026811.19	ENSMUST00000095045.9	2536	7	1074	186	14	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTGGGTAACCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	32498096	32510630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32498238_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
ENSMUSG00000026811.19_32499314_32509985_1	chr2	+	1325	5	ISM	ENSMUSG00000026811.19	ENST00000291839.10	1973	7	2262	445	78	444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGGGGAGGGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	32499313	32509985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32499329_32502235_32502416_32504792_32505181_32508508_32508617_32509351
ENSMUSG00000026811.19_32502341_32510090_1	chr2	+	1310	4	ISM	ENSMUSG00000026811.19	ENST00000291839.10	1973	7	5289	340	3105	-340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTGAGTGACCTTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	32502340	32510090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32502416_32504792_32505181_32508508_32508617_32509351
ENSMUSG00000026811.19_32504791_32510209_1	chr2	+	1356	3	ISM	ENSMUSG00000026811.19	ENST00000291839.10	1973	7	7739	221	5555	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCGCTGGGGGACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	32504790	32510209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32505181_32508508_32508617_32509351
ENSMUSG00000026812.17_28531240_28561056_1	chr2	+	1148	9	ISM	ENSMUSG00000026812.17	ENST00000403810.6	1707	11	-6	1463	-6	-1463	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAAGCAGTCTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	28531239	28561056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880
ENSMUSG00000026812.17_28531240_28561850_1	chr2	+	1221	10	ISM	ENSMUSG00000026812.17	ENST00000403810.6	1707	11	-6	669	-6	-669	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTTCCCCATCAACAC	NA	NA	NA	NA	NA	NA	NA	NA	28531239	28561850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777
ENSMUSG00000026812.17_28542180_28561850_1	chr2	+	1130	9	ISM	ENSMUSG00000026812.17	ENST00000403810.6	1707	11	10934	669	-6399	-669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTTCCCCATCAACAC	NA	NA	NA	NA	NA	NA	NA	NA	28542179	28561850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777
ENSMUSG00000026812.17_28548719_28560962_1	chr2	+	797	7	ISM	ENSMUSG00000026812.17	ENST00000647078.1	1394	10	105	1962	105	-1557	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTATTCTGTGTCACACCA	NA	NA	NA	NA	NA	NA	NA	NA	28548718	28560962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880
ENSMUSG00000026812.17_28551593_28562139_1	chr2	+	1170	7	ISM	ENSMUSG00000026812.17	ENST00000647078.1	1394	10	2979	785	2979	-380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTAGCTGGGTGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	28551592	28562139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777
ENSMUSG00000026812.17_28551642_28562346_1	chr2	+	1151	8	ISM	ENSMUSG00000026812.17	ENST00000403810.6	1707	11	20396	173	3028	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	891	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTCGTGCAGGATTCA	NA	NA	NA	NA	NA	NA	NA	NA	28551641	28562346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28562140_28562316
ENSMUSG00000026812.17_28552513_28562397_1	chr2	+	1106	7	ISM	ENSMUSG00000026812.17	ENST00000403810.6	1707	11	21267	122	3899	-122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTAGGCTAGTCTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	28552512	28562397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28562140_28562316
ENSMUSG00000026812.17_28552565_28562519_1	chr2	+	1176	7	ISM	ENSMUSG00000026812.17	ENST00000403810.6	1707	11	21319	0	3951	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGATCTTAGGTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	28552564	28562519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28562140_28562316
ENSMUSG00000026812.17_28552584_28562519_1	chr2	+	865	7	ISM	ENSMUSG00000026812.17	ENST00000647078.1	1394	10	3970	405	3970	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGATCTTAGGTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	28552583	28562519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561936_28562404
ENSMUSG00000026812.17_28553522_28562810_1	chr2	+	824	7	ISM	ENSMUSG00000026812.17	ENST00000647078.1	1394	10	4908	114	4908	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCAGGAACCCCAGCGAC	NA	NA	NA	NA	NA	NA	NA	NA	28553521	28562810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561936_28562404_28562517_28562796
ENSMUSG00000026812.17_28553597_28562844_1	chr2	+	783	7	ISM	ENSMUSG00000026812.17	ENST00000647078.1	1394	10	4983	80	4983	-80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACCTTGTCCCCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	28553596	28562844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561936_28562404_28562517_28562796
ENSMUSG00000026812.17_28553640_28562924_1	chr2	+	820	7	ISM	ENSMUSG00000026812.17	ENST00000647078.1	1394	10	5026	0	5026	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	893	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGATTAGATCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	28553639	28562924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561936_28562404_28562517_28562796
ENSMUSG00000026816.15_28457645_28473000_1	chr2	-	1155	9	FSM	ENSMUSG00000026816.15	ENST00000372099.10	1235	9	80	0	-43	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCGCTGTTCCCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	28473000	28457644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_28457815_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28472836
ENSMUSG00000026816.15_28458571_28460482_1	chr2	-	220	3	ISM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	12475	926	12475	-926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAAGACCACAGATCACC	NA	NA	NA	NA	NA	NA	NA	NA	28460482	28458570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_28458640_28459303_28459387_28460414
ENSMUSG00000026816.15_28458624_28460528_1	chr2	-	207	3	NNC	ENSMUSG00000026816.15	novel	1235	9	NA	NA	12429	-979	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCGAAACGATGGGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	28460528	28458623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_28458640_28459303_28459387_28460420
ENSMUSG00000026816.15_28462287_28463584_1	chr2	-	222	2	ISM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	9373	4642	9373	-4642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAAATGCTGTCAAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	28463584	28462286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_28462313_28463388
ENSMUSG00000026816.15_28463442_28467962_1	chr2	-	218	2	ISM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	4995	5797	4995	-5797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGCCTGCACCAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	28467962	28463441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_28463585_28467887
ENSMUSG00000026816.15_28463495_28468020_1	chr2	-	223	2	ISM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	4937	5850	4937	-5850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGACACTGAGGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	28468020	28463494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_28463585_28467887
ENSMUSG00000026816.15_28463547_28468069_1	chr2	-	220	2	ISM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	4888	5902	4888	-5902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGGACTGAGTAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	28468069	28463546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_28463585_28467887
ENSMUSG00000026816.15_28467926_28469610_1	chr2	-	242	2	ISM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	3347	10281	3347	-10281	internal_fragment	TRUE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGACTATTTCTATCG	NA	NA	NA	NA	NA	NA	NA	NA	28469610	28467925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_28468087_28469529
ENSMUSG00000026816.15_28468013_28469667_1	chr2	-	212	2	ISM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	3290	10368	3290	-10368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGCGCAAGCCTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	28469667	28468012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_28468087_28469529
ENSMUSG00000026816.15_28468058_28469726_1	chr2	-	226	2	ISM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	3231	10413	3231	-10413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAGAAGCTGGTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	28469726	28468057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_28468087_28469529
ENSMUSG00000026817.15_32511770_32524573_1	chr2	+	1588	7	FSM	ENSMUSG00000026817.15	ENSMUST00000113278.9	2085	7	0	497	0	-491	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTGGCCTTCCTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	32511769	32524573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32511890_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUSG00000026817.15_32511871_32524608_1	chr2	+	1522	7	FSM	ENSMUSG00000026817.15	ENSMUST00000113278.9	2085	7	101	462	101	-456	multi-exon	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGCCAGGCCTTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	32511870	32524608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32511890_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUSG00000026817.15_32515449_32525067_1	chr2	+	2053	6	NNC	ENSMUSG00000026817.15	novel	2063	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGTGAGTGTATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	32515448	32525067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32515551_32518462_32518501_32520221_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUSG00000026817.15_32515449_32525067_2	chr2	+	2059	7	NNC	ENSMUSG00000026817.15	novel	2063	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGTGAGTGTATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	32515448	32525067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32515551_32518462_32518501_32519865_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUSG00000026817.15_32515449_32525067_4	chr2	+	2062	6	NNC	ENSMUSG00000026817.15	novel	2063	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGTGAGTGTATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	32515448	32525067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32515551_32519824_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUSG00000026817.15_32519533_32524155_1	chr2	+	1108	6	FSM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	17	909	17	-909	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTCTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	32519532	32524155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32519629_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUSG00000026817.15_32519533_32524211_1	chr2	+	1164	6	FSM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	17	853	17	-853	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAGACAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	32519532	32524211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32519629_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUSG00000026818.6_28446217_28448051_1	chr2	-	680	4	ISM	ENSMUSG00000026818.6	ENST00000421286.4	841	5	5323	17	5323	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGGTGACCAGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	28448051	28446216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_28446386_28446685_28446884_28447626_28447831_28447942
ENSMUSG00000026818.6_28446299_28453374_1	chr2	-	742	5	FSM	ENSMUSG00000026818.6	ENST00000421286.4	841	5	0	99	0	-99	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAACCAGCGCTTCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	28453374	28446298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_28446386_28446685_28446884_28447626_28447831_28447942_28448130_28453308
ENSMUSG00000026819.16_32304499_32305685_1	chr2	-	966	2	ISM	ENSMUSG00000026819.16	ENST00000683206.1	2704	11	5927	-14	5927	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGAGCCAGGGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	32305685	32304498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32304788_32305008
ENSMUSG00000026819.16_32304716_32306583_1	chr2	-	1561	3	ISM	ENSMUSG00000026819.16	ENST00000683206.1	2704	11	5029	203	5029	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGGTCTCCCTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	32306583	32304715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32304788_32305008_32306335_32306420
ENSMUSG00000026819.16_32305862_32311527_1	chr2	-	1491	10	ISM	ENSMUSG00000026819.16	ENST00000683206.1	2704	11	85	1349	85	-790	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATGCCAGCTTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	32311527	32305861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32310667_32310704_32311314_32311403_32311484
ENSMUSG00000026819.16_32305891_32307863_1	chr2	-	999	5	ISM	ENSMUSG00000026819.16	ENST00000683206.1	2704	11	3749	1378	3749	-819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCTCAGTGCCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	32307863	32305890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735
ENSMUSG00000026819.16_32305996_32318604_1	chr2	-	1466	11	ISM	ENSMUSG00000026819.16	ENST00000682371.1	3283	13	2402	1483	2160	-924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGACCTGGCAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	32318604	32305995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32310667_32310704_32311314_32311403_32311484_32311612_32318579
ENSMUSG00000026819.16_32306051_32318662_1	chr2	-	1469	11	ISM	ENSMUSG00000026819.16	ENST00000682371.1	3283	13	2344	1538	2102	-979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACCCAGGATACCATAG	NA	NA	NA	NA	NA	NA	NA	NA	32318662	32306050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32310667_32310704_32311314_32311403_32311484_32311612_32318579
ENSMUSG00000026819.16_32306221_32320764_1	chr2	-	1554	12	ISM	ENSMUSG00000026819.16	ENST00000682371.1	3283	13	242	1708	0	-1149	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGCTGTGAGCATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	32320764	32306220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32310667_32310704_32311314_32311403_32311484_32311612_32318579_32318694_32320540
ENSMUSG00000026819.16_32307104_32320979_1	chr2	-	1504	10	ISM	ENSMUSG00000026819.16	ENST00000682371.1	3283	13	27	2591	27	-2032	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCCCTCTTGGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	32320979	32307103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32310667_32310704_32311314_32311403_32311484_32311612_32318579_32318694_32320540
ENSMUSG00000026820.6_32287708_32292291_1	chr2	+	672	6	ISM	ENSMUSG00000026820.6	ENSMUST00000028162.5	4978	7	1800	3493	154	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGAAGCCCCCTCGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	32287707	32292291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32287748_32290061_32290121_32290414_32290565_32290889_32291091_32291498_32291617_32292187
ENSMUSG00000026821.17_28423367_28434236_1	chr2	+	1174	6	ISM	ENSMUSG00000026821.17	ENSMUST00000113893.8	3683	18	0	8842	0	-8043	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCACAGAGCCTGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	28423366	28434236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28423746_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000
ENSMUSG00000026821.17_28423554_28434295_1	chr2	+	1046	6	ISM	ENSMUSG00000026821.17	ENSMUST00000113893.8	3683	18	187	8783	0	-7984	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCTGCCTGAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	28423553	28434295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28423746_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000
ENSMUSG00000026821.17_28438441_28442446_1	chr2	+	1074	6	ISM	ENSMUSG00000026821.17	ENSMUST00000238699.2	2725	18	20579	-167	14887	167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCTGGCCTCTGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	28438440	28442446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442105
ENSMUSG00000026821.17_28438967_28442648_1	chr2	+	1103	4	ISM	ENSMUSG00000026821.17	ENSMUST00000238699.2	2725	18	21105	-369	15413	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCCAGCAGGGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	28438966	28442648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28439169_28439301_28439545_28440460_28440576_28442105
ENSMUSG00000026821.17_28439374_28442927_1	chr2	+	1108	3	ISM	ENSMUSG00000026821.17	ENSMUST00000238699.2	2725	18	21512	-648	15820	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACGACACGCAGTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	28439373	28442927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28439545_28440460_28440576_28442105
ENSMUSG00000026821.17_28439452_28442976_1	chr2	+	1079	3	ISM	ENSMUSG00000026821.17	ENSMUST00000238699.2	2725	18	21590	-697	15898	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGTATAAAACGTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	28439451	28442976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28439545_28440460_28440576_28442105
ENSMUSG00000026821.17_28439505_28443082_1	chr2	+	1132	3	ISM	ENSMUSG00000026821.17	ENSMUST00000238699.2	2725	18	21643	-803	15951	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCCTGGTCACTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	28439504	28443082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28439545_28440460_28440576_28442105
ENSMUSG00000026825.18_32199038_32202785_1	chr2	-	129	2	ISM	ENSMUSG00000026825.18	ENST00000565702.1	462	3	2275	22	2216	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCCCCCCTTCGACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	32202785	32199037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32199077_32202695
ENSMUSG00000026825.18_32202869_32204939_1	chr2	-	107	2	ISM	ENSMUSG00000026825.18	ENST00000560794.1	423	3	62	3852	62	-3378	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAATCGGCCGAGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	32204939	32202868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32202938_32204901
ENSMUSG00000026826.14_56996950_56999267_1	chr2	-	1847	3	ISM	ENSMUSG00000026826.14	ENSMUST00000112627.2	2400	7	3817	-561	3817	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGTGTACGACAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	56999267	56996949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_56998425_56998572_56998752_56999074
ENSMUSG00000026826.14_57000745_57001784_1	chr2	-	231	2	ISM	ENSMUSG00000026826.14	ENSMUST00000112627.2	2400	7	1300	3234	1300	-3234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGCAAATAAAAACTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	57001784	57000744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_57000779_57001587
ENSMUSG00000026826.14_57002226_57002980_1	chr2	-	246	2	ISM	ENSMUSG00000026826.14	ENST00000339562.9	3476	8	1979	5379	104	-4715	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTTGTACCAAATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	57002980	57002225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_57002454_57002962
ENSMUSG00000026826.14_57002401_57004775_1	chr2	-	221	3	ISM	ENSMUSG00000026826.14	ENSMUST00000028166.9	3568	8	275	5559	184	-4890	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTCAGAGCTACAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	57004775	57002400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_57002454_57002962_57003085_57004729
ENSMUSG00000026826.14_57003002_57004880_1	chr2	-	238	2	ISM	ENSMUSG00000026826.14	ENST00000339562.9	3476	8	79	6155	79	-5491	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTAATTTCCTCGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	57004880	57003001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_57003085_57004725
ENSMUSG00000026827.13_57128394_57196988_1	chr2	+	736	6	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	0	63743	0	-63743	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTTGCAGGGAGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	57128393	57196988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943
ENSMUSG00000026827.13_57128529_57197082_1	chr2	+	695	6	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	135	63649	135	-63649	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCGCCATTGTCTACTA	NA	NA	NA	NA	NA	NA	NA	NA	57128528	57197082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943
ENSMUSG00000026827.13_57196988_57245527_1	chr2	+	680	5	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	68594	15204	68594	-15204	internal_fragment	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTGCAGACACTCA	NA	NA	NA	NA	NA	NA	NA	NA	57196987	57245527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471
ENSMUSG00000026827.13_57228904_57245851_1	chr2	+	674	5	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	100510	14880	100510	-14880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGTAGGACTGTTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	57228903	57245851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771
ENSMUSG00000026827.13_57230083_57246543_1	chr2	+	656	5	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	101689	14188	101689	-14188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAAACCTATGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	57230082	57246543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530
ENSMUSG00000026827.13_57230131_57246604_1	chr2	+	669	5	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	101737	14127	101737	-14127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGGCCTGTTGTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	57230130	57246604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530
ENSMUSG00000026827.13_57235241_57247681_1	chr2	+	654	5	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	106847	13050	106847	-13050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTATGCCTGCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	57235240	57247681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666
ENSMUSG00000026827.13_57235285_57247757_1	chr2	+	686	5	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	106891	12974	106891	-12974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCCCTGCCTAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	57235284	57247757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666
ENSMUSG00000026827.13_57235346_57247805_1	chr2	+	673	5	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	106952	12926	106952	-12926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGTGAATTGAGGAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	57235345	57247805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666
ENSMUSG00000026827.13_57245561_57254311_1	chr2	+	676	6	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	117167	6420	117167	-6420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTTGATGTTCAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	57245560	57254311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261
ENSMUSG00000026827.13_57245898_57257412_1	chr2	+	681	7	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	117504	3319	117504	-3319	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGATGAAAACTGCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	57245897	57257412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ENSMUSG00000026827.13_57246622_57257547_1	chr2	+	675	6	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	118228	3184	118228	-3184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGATGACTTAAACTCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	57246621	57257547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ENSMUSG00000026827.13_57247747_57257700_1	chr2	+	707	5	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	119353	3031	119353	-3031	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAACTTACTTTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	57247746	57257700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ENSMUSG00000026827.13_57247796_57257753_1	chr2	+	711	5	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	119402	2978	119402	-2978	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAAAGCGCTTTTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	57247795	57257753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ENSMUSG00000026827.13_57254087_57257865_1	chr2	+	749	4	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	125693	2866	125693	-2866	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGGCAGACCCCGTATA	NA	NA	NA	NA	NA	NA	NA	NA	57254086	57257865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_57254156_57254261_57254341_57254516_57254616_57257363
ENSMUSG00000026827.13_57254141_57257865_1	chr2	+	695	4	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	125747	2866	125747	-2866	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGGCAGACCCCGTATA	NA	NA	NA	NA	NA	NA	NA	NA	57254140	57257865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_57254156_57254261_57254341_57254516_57254616_57257363
ENSMUSG00000026833.19_28083220_28098145_1	chr2	+	311	2	ISM	ENSMUSG00000026833.19	ENST00000277415.15	963	4	71	6298	71	-6292	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGCAGGTGTATCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	28083219	28098145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28083475_28098089
ENSMUSG00000026833.19_28083345_28098229_1	chr2	+	269	2	NNC	ENSMUSG00000026833.19	novel	963	4	NA	NA	196	-6208	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	99	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGAGAAGGTGAGTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	28083344	28098229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_28083475_28098090
ENSMUSG00000026833.19_28083354_28102559_1	chr2	+	287	3	ISM	ENSMUSG00000026833.19	ENST00000277415.15	963	4	205	1884	205	-1878	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCATAGAAGTCTTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	28083353	28102559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28083475_28098089_28098240_28102543
ENSMUSG00000026833.19_28083399_28102615_1	chr2	+	298	3	ISM	ENSMUSG00000026833.19	ENST00000277415.15	963	4	250	1828	250	-1822	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGAGAACCAGATGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	28083398	28102615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28083475_28098089_28098240_28102543
ENSMUSG00000026833.19_28083453_28102663_1	chr2	+	292	3	ISM	ENSMUSG00000026833.19	ENST00000277415.15	963	4	304	1780	304	-1774	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGCCATAAGCAGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	28083452	28102663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28083475_28098089_28098240_28102543
ENSMUSG00000026833.19_28098175_28104179_1	chr2	+	288	3	ISM	ENSMUSG00000026833.19	ENSMUST00000102879.4	1072	4	2504	258	2504	-258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGAGAGCTTTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	28098174	28104179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_28098240_28102543_28102700_28104112
ENSMUSG00000026835.16_27966595_27972966_1	chr2	-	800	7	FSM	ENSMUSG00000026835.16	ENST00000371806.4	832	7	32	0	32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTAGCTTCCCACACAG	NA	NA	NA	NA	NA	NA	NA	NA	27972966	27966594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_27966835_27968258_27968394_27969133_27969264_27969633_27969762_27970569_27970634_27970907_27970962_27972917
ENSMUSG00000026836.16_58336453_58353168_1	chr2	-	1838	4	ISM	ENSMUSG00000026836.16	ENSMUST00000112599.8	2891	10	53116	7	53116	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTTTCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	58353168	58336452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892
ENSMUSG00000026836.16_58336609_58364205_1	chr2	-	1850	6	ISM	ENSMUSG00000026836.16	ENSMUST00000112599.8	2891	10	42079	163	42079	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCCCAAACGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	58364205	58336608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184
ENSMUSG00000026836.16_58336661_58364260_1	chr2	-	1853	6	ISM	ENSMUSG00000026836.16	ENSMUST00000112599.8	2891	10	42024	215	42024	-208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAACACCACCCGATATAT	NA	NA	NA	NA	NA	NA	NA	NA	58364260	58336660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184
ENSMUSG00000026836.16_58336744_58364284_1	chr2	-	1794	6	ISM	ENSMUSG00000026836.16	ENSMUST00000112599.8	2891	10	42000	298	42000	-291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCACATTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	58364284	58336743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184
ENSMUSG00000026836.16_58336921_58367828_1	chr2	-	1829	7	ISM	ENSMUSG00000026836.16	ENSMUST00000112599.8	2891	10	38456	475	38456	240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACACAACTTTGCAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	58367828	58336920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616
ENSMUSG00000026836.16_58337161_58390569_1	chr2	-	1927	9	ISM	ENSMUSG00000026836.16	ENSMUST00000112599.8	2891	10	15715	715	15715	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCAGCAATATCGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	58390569	58337160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495
ENSMUSG00000026836.16_58337333_58456001_1	chr2	-	1851	10	FSM	ENSMUSG00000026836.16	ENST00000684595.1	2846	10	112	883	112	-172	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCACACCACAAAGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	58456001	58337332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58455905
ENSMUSG00000026836.16_58337393_58456061_1	chr2	-	1851	10	FSM	ENSMUSG00000026836.16	ENST00000684595.1	2846	10	52	943	52	-232	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGACACCAAAACCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	58456061	58337392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58455905
ENSMUSG00000026842.17_31578740_31693425_1	chr2	+	6022	11	FSM	ENSMUSG00000026842.17	ENSMUST00000075759.13	6327	11	177	128	177	-128	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGCACACCAACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	31578739	31693425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_31579955_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ENSMUSG00000026842.17_31578796_31693553_1	chr2	+	6094	11	FSM	ENSMUSG00000026842.17	ENSMUST00000075759.13	6327	11	233	0	233	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTTGGTCTGTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	31578795	31693553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_31579955_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ENSMUSG00000026842.17_31578856_31693553_1	chr2	+	6034	11	FSM	ENSMUSG00000026842.17	ENSMUST00000075759.13	6327	11	293	0	293	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTTGGTCTGTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	31578855	31693553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_31579955_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ENSMUSG00000026843.16_31462804_31505637_1	chr2	+	1779	18	FSM	ENSMUSG00000026843.16	ENSMUST00000055244.13	3648	18	-25	1894	-25	-1894	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTAGCCAGTCCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	31462803	31505637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ENSMUSG00000026843.16_31473203_31506297_1	chr2	+	1688	18	ISM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	10540	1241	10374	-1234	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTCTGTGAAACACTA	NA	NA	NA	NA	NA	NA	NA	NA	31473202	31506297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ENSMUSG00000026843.16_31488577_31506728_1	chr2	+	1808	13	ISM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	25914	810	25748	-803	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTATCTTGGCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	31488576	31506728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ENSMUSG00000026843.16_31488638_31506728_1	chr2	+	1747	13	ISM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	25975	810	25809	-803	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTATCTTGGCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	31488637	31506728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ENSMUSG00000026843.16_31493283_31506913_1	chr2	+	1698	11	ISM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	30620	625	30454	-618	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTCTCCATTATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	31493282	31506913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ENSMUSG00000026843.16_31498170_31507268_1	chr2	+	1731	8	ISM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	35507	270	35341	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACATGTATTTTTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	31498169	31507268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ENSMUSG00000026843.16_31501664_31507383_1	chr2	+	1704	7	ISM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	39001	155	38835	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTATGATGCTTGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	31501663	31507383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ENSMUSG00000026843.16_31501711_31507532_1	chr2	+	1806	7	ISM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	39048	6	38882	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	31501710	31507532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ENSMUSG00000026848.15_30842971_30848361_1	chr2	+	2374	5	NNC	ENSMUSG00000026848.15	novel	3039	5	NA	NA	0	-666	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCTCAGGATGACGCCT	NA	NA	NA	NA	NA	NA	NA	NA	30842970	30848361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_30843236_30843763_30844021_30845779_30845966_30846459_30846588_30846823
ENSMUSG00000026848.15_30843184_30848479_2	chr2	+	2279	5	NNC	ENSMUSG00000026848.15	novel	3039	5	NA	NA	213	-548	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAACTCTGCCATGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30843183	30848479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_30843236_30843763_30844021_30845779_30845966_30846459_30846588_30846823
ENSMUSG00000026848.15_30843764_30848671_1	chr2	+	2419	4	NNC	ENSMUSG00000026848.15	novel	3039	5	NA	NA	793	-356	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGGAATGCCAGGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	30843763	30848671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_30844021_30845779_30845966_30846459_30846588_30846823
ENSMUSG00000026848.15_30843866_30848735_1	chr2	+	2381	4	NNC	ENSMUSG00000026848.15	novel	3039	5	NA	NA	895	-292	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAGTTGAGCTACGTACA	NA	NA	NA	NA	NA	NA	NA	NA	30843865	30848735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_30844021_30845779_30845966_30846459_30846588_30846823
ENSMUSG00000026848.15_30843898_30848754_1	chr2	+	2360	4	NNC	ENSMUSG00000026848.15	novel	3039	5	NA	NA	927	-273	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGACCCTGTCTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	30843897	30848754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_30844023_30845789_30845966_30846459_30846588_30846823
ENSMUSG00000026848.15_30843932_30848782_1	chr2	+	2362	4	NNC	ENSMUSG00000026848.15	novel	3039	5	NA	NA	961	-245	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAACGTGCCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	30843931	30848782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_30844021_30845779_30845966_30846459_30846588_30846823
ENSMUSG00000026848.15_30845816_30849024_1	chr2	+	2479	3	ISM	ENSMUSG00000026848.15	ENSMUST00000028199.12	3039	5	2845	3	2845	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTCCTGAGCTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	30845815	30849024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30845966_30846459_30846588_30846823
ENSMUSG00000026848.15_30845873_30849024_1	chr2	+	2422	3	ISM	ENSMUSG00000026848.15	ENSMUST00000028199.12	3039	5	2902	3	2902	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTCCTGAGCTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	30845872	30849024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30845966_30846459_30846588_30846823
ENSMUSG00000026849.19_30850639_30857945_1	chr2	-	1394	5	NNC	ENSMUSG00000026849.19	novel	1401	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGGCTTTGTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	30857945	30850638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_30851210_30853486_30853615_30853705_30853882_30857108_30857368_30857685
ENSMUSG00000026849.19_30850639_30857945_3	chr2	-	1393	5	NNC	ENSMUSG00000026849.19	novel	1401	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGGCTTTGTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	30857945	30850638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_30851210_30853486_30853607_30853705_30853882_30857101_30857368_30857685
ENSMUSG00000026851.10_30862189_30864049_1	chr2	-	1361	3	ISM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	7904	0	7904	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	30864049	30862188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30863314_30863703_30863803_30863912
ENSMUSG00000026851.10_30862363_30866100_1	chr2	-	1385	4	ISM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	5853	174	5853	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAGAGAGAGAGAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	30866100	30862362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902
ENSMUSG00000026851.10_30862434_30868921_1	chr2	-	1407	6	ISM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	3032	245	3032	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTTTGAGAGCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	30868921	30862433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906
ENSMUSG00000026851.10_30862787_30871953_1	chr2	-	1386	9	FSM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	0	598	0	-598	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATACTGACAACATAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	30871953	30862786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30871789
ENSMUSG00000026853.16_30292510_30295300_1	chr2	-	531	3	ISM	ENSMUSG00000026853.16	ENST00000681325.1	1710	11	7959	0	7959	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCTCCAGTTTGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	30295300	30292509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30292806_30293500_30293624_30295188
ENSMUSG00000026853.16_30292510_30295300_3	chr2	-	756	5	ISM	ENSMUSG00000026853.16	ENSMUST00000102854.10	2160	15	10236	-80	7959	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCTCCAGTTTGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	30295300	30292509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177
ENSMUSG00000026853.16_30292649_30295516_1	chr2	-	737	6	ISM	ENSMUSG00000026853.16	ENSMUST00000102854.10	2160	15	10020	59	7743	-59	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGCTCTGCTGGACATG	NA	NA	NA	NA	NA	NA	NA	NA	30295516	30292648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396
ENSMUSG00000026853.16_30293539_30297000_1	chr2	-	676	7	ISM	ENSMUSG00000026853.16	ENSMUST00000102854.10	2160	15	8536	949	6259	-949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCATTGCTATGCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	30297000	30293538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967
ENSMUSG00000026853.16_30293561_30297031_1	chr2	-	460	5	ISM	ENSMUSG00000026853.16	ENST00000681325.1	1710	11	6228	1051	6228	-971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCTTCATGGACACCTC	NA	NA	NA	NA	NA	NA	NA	NA	30297031	30293560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30293624_30295188_30295301_30295396_30295517_30296379_30296481_30296967
ENSMUSG00000026853.16_30293585_30297062_1	chr2	-	692	7	ISM	ENSMUSG00000026853.16	ENSMUST00000102854.10	2160	15	8474	995	6197	-995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGAGGACCTGGTCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	30297062	30293584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967
ENSMUSG00000026853.16_30294960_30297744_1	chr2	-	676	6	ISM	ENSMUSG00000026853.16	ENSMUST00000102854.10	2160	15	7792	2370	5515	-2370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGCCGGTGAGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	30297744	30294959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717
ENSMUSG00000026853.16_30295011_30297802_1	chr2	-	683	6	ISM	ENSMUSG00000026853.16	ENSMUST00000102854.10	2160	15	7734	2421	5457	-2421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTCAGCCTCCATAGACT	NA	NA	NA	NA	NA	NA	NA	NA	30297802	30295010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717
ENSMUSG00000026853.16_30295068_30297851_1	chr2	-	675	6	ISM	ENSMUSG00000026853.16	ENSMUST00000102854.10	2160	15	7685	2478	5408	-2478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCACGTATGAAAGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	30297851	30295067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717
ENSMUSG00000026853.16_30295239_30298113_1	chr2	-	683	6	ISM	ENSMUSG00000026853.16	ENST00000681325.1	1710	11	5146	2729	5146	-2649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCGAGAAGCTAAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	30298113	30295238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067
ENSMUSG00000026853.16_30296380_30300025_1	chr2	-	732	6	ISM	ENSMUSG00000026853.16	ENST00000681325.1	1710	11	3234	3870	3234	-3790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATGGTTCCAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	30300025	30296379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968
ENSMUSG00000026853.16_30296416_30298146_1	chr2	-	498	4	ISM	ENSMUSG00000026853.16	ENST00000681325.1	1710	11	5113	3906	5113	-3826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTTGCACTTGTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	30298146	30296415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30296481_30296967_30297147_30297717_30297893_30298067
ENSMUSG00000026853.16_30297045_30303056_1	chr2	-	678	6	ISM	ENSMUSG00000026853.16	ENST00000681325.1	1710	11	203	4535	203	-4455	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTAGCAGGCCAGATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	30303056	30297044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994
ENSMUSG00000026853.16_30297095_30300031_1	chr2	-	510	5	ISM	ENSMUSG00000026853.16	ENST00000681325.1	1710	11	3228	4585	3228	-4505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCTGGACAAGCAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	30300031	30297094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968
ENSMUSG00000026853.16_30297102_30303121_1	chr2	-	686	6	ISM	ENSMUSG00000026853.16	ENST00000681325.1	1710	11	138	4592	138	-4512	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCGTGTGCCTGGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	30303121	30297101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994
ENSMUSG00000026853.16_30297775_30303027_1	chr2	-	490	5	ISM	ENSMUSG00000026853.16	ENST00000681325.1	1710	11	232	5265	232	-5185	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAACCTCCAACCACCGA	NA	NA	NA	NA	NA	NA	NA	NA	30303027	30297774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994
ENSMUSG00000026853.16_30297811_30303093_1	chr2	-	520	5	ISM	ENSMUSG00000026853.16	ENST00000681325.1	1710	11	166	5301	166	-5221	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCTCACTGCAATCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	30303093	30297810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994
ENSMUSG00000026853.16_30297870_30305378_1	chr2	-	681	6	ISM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	447	6757	158	-5280	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGACGGAACACCGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	30305378	30297869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
ENSMUSG00000026853.16_30299989_30305618_1	chr2	-	658	3	ISM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	207	8876	-82	-7399	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTACAGGGTCAGCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	30305618	30299988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30300088_30302994_30303259_30305323
ENSMUSG00000026853.16_30300031_30305679_1	chr2	-	677	3	ISM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	146	8918	104	-7441	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCCAGCCCAGGAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	30305679	30300030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30300088_30302994_30303259_30305323
ENSMUSG00000026854.17_30888747_30900268_1	chr2	+	834	9	ISM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	2693	13326	2693	2664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGGACTCCGATTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	30888746	30900268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177
ENSMUSG00000026854.17_30888852_30900338_1	chr2	+	799	9	ISM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	2798	13256	2798	2734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCCTGTGACTCGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	30888851	30900338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177
ENSMUSG00000026854.17_30892988_30900597_1	chr2	+	852	6	ISM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	6934	12997	6934	2993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCCACCAGCCCCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	30892987	30900597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177
ENSMUSG00000026854.17_30894446_30901062_1	chr2	+	850	6	ISM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	8392	12532	8392	3458	internal_fragment	TRUE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCAAGCTGTCCAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	30894445	30901062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990
ENSMUSG00000026854.17_30896395_30901508_1	chr2	+	902	5	ISM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	10341	12086	10341	3904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTACCTAGGGGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	30896394	30901508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392
ENSMUSG00000026854.17_30897815_30901709_1	chr2	+	838	5	ISM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	11761	11885	11761	4105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCCATCTACCAGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	30897814	30901709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634
ENSMUSG00000026854.17_30900263_30902404_1	chr2	+	882	5	ISM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	14209	11190	14209	4800	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAAGGGTGAGTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	30900262	30902404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318
ENSMUSG00000026854.17_30900381_30907165_1	chr2	+	878	8	ISM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	14327	6429	14327	-4331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGGCATGAGGTGATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	30900380	30907165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140
ENSMUSG00000026854.17_30900478_30907218_1	chr2	+	834	8	ISM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	14424	6376	14424	-4278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGAGGGACTGGACCTACG	NA	NA	NA	NA	NA	NA	NA	NA	30900477	30907218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140
ENSMUSG00000026854.17_30901020_30907485_1	chr2	+	849	8	ISM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	14966	6109	14966	-4011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTACAGAACGTGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	30901019	30907485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396
ENSMUSG00000026854.17_30901435_30907804_1	chr2	+	841	8	ISM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	15381	5790	15381	-3692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCTTTGCCGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	30901434	30907804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693
ENSMUSG00000026854.17_30901739_30908774_1	chr2	+	852	9	ISM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	15685	4820	15685	-2722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGGAGATTGAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	30901738	30908774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726
ENSMUSG00000026854.17_30907135_30911393_1	chr2	+	908	8	ISM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	21081	2201	21081	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGGCCCTGAGATTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	30907134	30911393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ENSMUSG00000026854.17_30907397_30911496_1	chr2	+	824	7	ISM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	21343	2098	21343	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGCCATGCTGAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	30907396	30911496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ENSMUSG00000026856.15_30282428_30290541_1	chr2	+	2089	8	FSM	ENSMUSG00000026856.15	ENSMUST00000028209.15	2251	8	162	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGCATACATTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	30282427	30290541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
ENSMUSG00000026857.10_30697838_30712610_1	chr2	+	952	4	FSM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	0	435	0	-435	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTTGCCCTGAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	30697837	30712610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_30698096_30709640_30709845_30710460_30710714_30712373
ENSMUSG00000026857.10_30698006_30712722_1	chr2	+	891	4	NNC	ENSMUSG00000026857.10	novel	1387	4	NA	NA	168	-323	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGATTGGGGCACTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	30698005	30712722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_30698096_30709645_30709845_30710460_30710714_30712373
ENSMUSG00000026857.10_30709687_30712890_1	chr2	+	928	3	ISM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	11849	155	11849	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACATGGTACCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	30709686	30712890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30709845_30710460_30710714_30712373
ENSMUSG00000026860.17_30234823_30240392_1	chr2	-	1166	6	ISM	ENSMUSG00000026860.17	ENSMUST00000113620.10	1694	10	8885	0	8860	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	30240392	30234822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30240299
ENSMUSG00000026860.17_30234933_30240729_1	chr2	-	1190	7	ISM	ENSMUSG00000026860.17	ENSMUST00000113620.10	1694	10	8548	110	8523	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTGGCTGGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	30240729	30234932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30240299_30240393_30240595
ENSMUSG00000026860.17_30235147_30240729_1	chr2	-	1039	8	ISM	ENSMUSG00000026860.17	ENSMUST00000028214.15	1810	11	8599	326	8523	-324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCTCCCTTAAGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	30240729	30235146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595
ENSMUSG00000026860.17_30235153_30245380_1	chr2	-	1207	9	ISM	ENSMUSG00000026860.17	ENSMUST00000113620.10	1694	10	3897	330	3872	-330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTCCCAGCTCCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	30245380	30235152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30240299_30240393_30240595_30240730_30244864_30244994_30245272
ENSMUSG00000026860.17_30235254_30244925_1	chr2	-	993	9	ISM	ENSMUSG00000026860.17	ENSMUST00000028214.15	1810	11	4403	433	4327	-431	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTGTGCCCGTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	30244925	30235253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864
ENSMUSG00000026860.17_30235323_30249252_1	chr2	-	1169	10	FSM	ENSMUSG00000026860.17	ENSMUST00000113620.10	1694	10	25	500	0	-500	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGGCTCTGCCACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	30249252	30235322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUSG00000026860.17_30235412_30245377_1	chr2	-	1008	10	ISM	ENSMUSG00000026860.17	ENSMUST00000028214.15	1810	11	3951	591	3875	-589	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCCCGACTGGCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	30245377	30235411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272
ENSMUSG00000026860.17_30235832_30249252_1	chr2	-	994	10	ISM	ENSMUSG00000026860.17	ENSMUST00000028214.15	1810	11	76	1011	0	-1009	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAGGCAGCCCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	30249252	30235831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUSG00000026864.14_34662111_34662802_1	chr2	+	498	3	ISM	ENSMUSG00000026864.14	ENSMUST00000028222.13	3672	9	129	4757	4	-3741	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGACCCGTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34662110	34662802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_34662159_34662240_34662459_34662570
ENSMUSG00000026864.14_34662111_34666543_1	chr2	+	2604	8	NNC	ENSMUSG00000026864.14	novel	2613	8	NA	NA	4	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	11240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGGTGTGTCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34662110	34666543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664044_34664431_34664546_34664785_34665077_34665246_34665562
ENSMUSG00000026864.14_34664293_34664676_1	chr2	+	154	2	ISM	ENSMUSG00000026864.14	ENST00000680272.1	2540	8	2214	1880	2186	-1867	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTCTTCAATGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	34664292	34664676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_34664431_34664660
ENSMUSG00000026864.14_34664354_34664728_1	chr2	+	145	2	ISM	ENSMUSG00000026864.14	ENST00000680272.1	2540	8	2275	1828	2247	-1815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCCTATGGTGCCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	34664353	34664728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_34664431_34664660
ENSMUSG00000026864.14_34664403_34664780_1	chr2	+	148	2	ISM	ENSMUSG00000026864.14	ENST00000680272.1	2540	8	2324	1776	2296	-1763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTAGGTTGTTATCACT	NA	NA	NA	NA	NA	NA	NA	NA	34664402	34664780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_34664431_34664660
ENSMUSG00000026869.13_34741066_34747719_1	chr2	-	2101	4	ISM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	13255	1320	13215	-1320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTAGTTGTCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	34747719	34741065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649
ENSMUSG00000026869.13_34741138_34747751_1	chr2	-	2061	4	ISM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	13223	1392	13183	-1392	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGTTGGGAATTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	34747751	34741137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649
ENSMUSG00000026869.13_34741285_34750697_1	chr2	-	2058	5	ISM	ENSMUSG00000026869.13	ENST00000373904.5	1389	9	10239	-1302	10237	1302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTGACTTAATTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	34750697	34741284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643
ENSMUSG00000026869.13_34741396_34753488_1	chr2	-	2056	6	ISM	ENSMUSG00000026869.13	ENST00000373904.5	1389	9	7448	-1191	7446	1191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTGATTATTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	34753488	34741395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468
ENSMUSG00000026869.13_34741512_34755599_1	chr2	-	2091	7	ISM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	5375	1766	5335	1075	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACACACACACACACACA	NA	NA	NA	NA	NA	NA	NA	NA	34755599	34741511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538
ENSMUSG00000026869.13_34741647_34756024_1	chr2	-	2055	8	ISM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	4950	1901	4910	940	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGACCAGTATCACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	34756024	34741646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993
ENSMUSG00000026869.13_34741786_34756952_1	chr2	-	2047	9	ISM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	4022	2040	3982	801	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCAGTGGCACTAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	34756952	34741785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904
ENSMUSG00000026869.13_34741835_34757005_1	chr2	-	2051	9	ISM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	3969	2089	3929	752	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTCTCGACACACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34757005	34741834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904
ENSMUSG00000026869.13_34741896_34757049_1	chr2	-	2034	9	ISM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	3925	2150	3885	691	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCGTGTACCAACTAACA	NA	NA	NA	NA	NA	NA	NA	NA	34757049	34741895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904
ENSMUSG00000026869.13_34742114_34760945_1	chr2	-	2000	10	FSM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	29	2368	-9	473	multi-exon	FALSE	canonical	NA	NA	NA	NA	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGTTGGTATTCCG	NA	NA	NA	NA	NA	NA	NA	NA	34760945	34742113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ENSMUSG00000026869.13_34744371_34750688_1	chr2	-	381	4	ISM	ENSMUSG00000026869.13	ENST00000373904.5	1389	9	10248	1784	10246	-1784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATCCTGGTTTTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	34750688	34744370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34744405_34746459_34746570_34747649_34747842_34750643
ENSMUSG00000026869.13_34747794_34756040_1	chr2	-	348	4	ISM	ENSMUSG00000026869.13	ENST00000373904.5	1389	9	4896	5207	4894	-5207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTGTGAGCGCTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	34756040	34747793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34747842_34750643_34750787_34753468_34753579_34755993
ENSMUSG00000026869.13_34747826_34756109_1	chr2	-	385	4	ISM	ENSMUSG00000026869.13	ENST00000373904.5	1389	9	4827	5239	4825	-5239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAACCTGGCCGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	34756109	34747825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34747842_34750643_34750787_34753468_34753579_34755993
ENSMUSG00000026869.13_34750666_34756924_1	chr2	-	365	4	ISM	ENSMUSG00000026869.13	ENST00000373904.5	1389	9	4012	8079	4010	5398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGCTTCTATCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	34756924	34750665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34750787_34753468_34753579_34755993_34756108_34756904
ENSMUSG00000026869.13_34750733_34756967_1	chr2	-	341	4	ISM	ENSMUSG00000026869.13	ENST00000373904.5	1389	9	3969	8146	3967	5331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCTTGCTCAAGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	34756967	34750732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34750787_34753468_34753579_34755993_34756108_34756904
ENSMUSG00000026869.13_34750771_34757040_1	chr2	-	376	4	ISM	ENSMUSG00000026869.13	ENST00000373904.5	1389	9	3896	8184	3894	5293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTGACATCACTAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	34757040	34750770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34750787_34753468_34753579_34755993_34756108_34756904
ENSMUSG00000026869.13_34753533_34760814_1	chr2	-	358	4	ISM	ENSMUSG00000026869.13	ENST00000373904.5	1389	9	122	10946	120	2531	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCACAAGTGGACTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	34760814	34753532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34753579_34755993_34756108_34756904_34757050_34760761
ENSMUSG00000026872.19_44877464_44884674_1	chr2	-	1774	3	ISM	ENSMUSG00000026872.19	ENST00000636026.2	5185	11	118620	-1	29380	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGAGCATTTATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44884674	44877463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44878891_44879002_44879166_44884490
ENSMUSG00000026872.19_44877621_44886182_1	chr2	-	1759	4	ISM	ENSMUSG00000026872.19	ENST00000636026.2	5185	11	117112	156	27872	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGGTCAAATAACATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	44886182	44877620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44878891_44879002_44879166_44884490_44884672_44886037
ENSMUSG00000026872.19_44877994_44886559_1	chr2	-	1763	4	ISM	ENSMUSG00000026872.19	ENST00000636026.2	5185	11	116735	529	27495	352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGTGTGAATTTAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	44886559	44877993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44878891_44879002_44879166_44884490_44884672_44886037
ENSMUSG00000026872.19_44878033_44886630_1	chr2	-	1795	4	ISM	ENSMUSG00000026872.19	ENST00000636026.2	5185	11	116664	568	27424	313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTTATTTTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	44886630	44878032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44878891_44879002_44879166_44884490_44884672_44886037
ENSMUSG00000026872.19_44878125_44884608_1	chr2	-	1159	2	ISM	ENSMUSG00000026872.19	ENST00000638007.1	9123	9	29446	4890	29446	221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACGATTCCTCAACACT	NA	NA	NA	NA	NA	NA	NA	NA	44884608	44878124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44879166_44884490
ENSMUSG00000026872.19_44879022_44887488_1	chr2	-	1776	3	ISM	ENSMUSG00000026872.19	ENST00000638007.1	9123	9	26566	5787	26566	-568	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCAGCACATGAATCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	44887488	44879021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44879166_44884490_44884672_44886037
ENSMUSG00000026872.19_44879087_44887531_1	chr2	-	1754	3	ISM	ENSMUSG00000026872.19	ENST00000638007.1	9123	9	26523	5852	26523	-633	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGGCGAGAAGCCCTATC	NA	NA	NA	NA	NA	NA	NA	NA	44887531	44879086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44879166_44884490_44884672_44886037
ENSMUSG00000026872.19_44879142_44887587_1	chr2	-	1755	3	ISM	ENSMUSG00000026872.19	ENST00000638007.1	9123	9	26467	5907	26467	-688	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAGAAAGCGTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	44887587	44879141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44879166_44884490_44884672_44886037
ENSMUSG00000026872.19_44884591_44887741_1	chr2	-	1785	2	ISM	ENSMUSG00000026872.19	ENST00000638007.1	9123	9	26313	11356	26313	-6137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGATAAAGAAGACAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	44887741	44884590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44884672_44886037
ENSMUSG00000026872.19_44886266_44888912_1	chr2	-	1759	2	ISM	ENSMUSG00000026872.19	ENST00000638007.1	9123	9	25142	13031	25142	-7812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCATTTAGTGCCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	44888912	44886265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44888008_44888895
ENSMUSG00000026872.19_44886316_44888968_1	chr2	-	1765	2	ISM	ENSMUSG00000026872.19	ENST00000638007.1	9123	9	25086	13081	25086	-7862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATTCTAATAACCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	44888968	44886315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44888008_44888895
ENSMUSG00000026872.19_44886446_44891714_1	chr2	-	1774	3	ISM	ENSMUSG00000026872.19	ENST00000638007.1	9123	9	22340	13211	22340	-7992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAGGTATTATAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	44891714	44886445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44888008_44888895_44889005_44891611
ENSMUSG00000026872.19_44886523_44891776_1	chr2	-	1759	3	ISM	ENSMUSG00000026872.19	ENST00000638007.1	9123	9	22278	13288	22278	-8069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCCAAATAGCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	44891776	44886522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44888008_44888895_44889005_44891611
ENSMUSG00000026872.19_44886578_44891826_1	chr2	-	1754	3	ISM	ENSMUSG00000026872.19	ENST00000638007.1	9123	9	22228	13343	22228	-8124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTCCTTTAAATCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	44891826	44886577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44888008_44888895_44889005_44891611
ENSMUSG00000026872.19_44886817_44907480_1	chr2	-	1776	5	ISM	ENSMUSG00000026872.19	ENST00000638007.1	9123	9	6574	13582	6574	-8363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGTCACCATCACTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	44907480	44886816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44888008_44888895_44889005_44891611_44891827_44892527_44892717_44907408
ENSMUSG00000026872.19_44886945_44912972_1	chr2	-	1762	6	ISM	ENSMUSG00000026872.19	ENST00000638007.1	9123	9	1082	13710	1082	-8491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATACTATGCTATGAACA	NA	NA	NA	NA	NA	NA	NA	NA	44912972	44886944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44888008_44888895_44889005_44891611_44891827_44892527_44892717_44907408_44907481_44912858
ENSMUSG00000026872.19_44887108_45000100_1	chr2	-	1816	7	ISM	ENSMUSG00000026872.19	ENSMUST00000177302.8	4020	9	200	8695	200	-8654	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGAAGAGATCAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	45000100	44887107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44888008_44888895_44889005_44891611_44891827_44892527_44892717_44907408_44907481_44912858_44913117_45000027
ENSMUSG00000026872.19_44887186_45000131_1	chr2	-	1769	7	ISM	ENSMUSG00000026872.19	ENSMUST00000177302.8	4020	9	169	8773	169	-8732	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCATGCCAGTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	45000131	44887185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44888008_44888895_44889005_44891611_44891827_44892527_44892717_44907408_44907481_44912858_44913117_45000027
ENSMUSG00000026872.19_44887253_45000169_1	chr2	-	1740	7	ISM	ENSMUSG00000026872.19	ENSMUST00000177302.8	4020	9	131	8840	131	-8799	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGCGTACTTTGATAGA	NA	NA	NA	NA	NA	NA	NA	NA	45000169	44887252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44888008_44888895_44889005_44891611_44891827_44892527_44892717_44907408_44907481_44912858_44913117_45000027
ENSMUSG00000026872.19_44887382_45002997_1	chr2	-	1774	8	ISM	ENSMUSG00000026872.19	ENST00000636026.2	5185	11	297	9917	0	-8928	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGAGTCATAACGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	45002997	44887381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44888008_44888895_44889005_44891611_44891827_44892527_44892717_44907408_44907481_44912858_44913117_45000027_45000170_45002834
ENSMUSG00000026878.18_35070217_35090870_3	chr2	-	2819	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	262	0	118	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGCATTATTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	35090870	35070216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ENSMUSG00000026878.18_35070217_35090870_4	chr2	-	2813	8	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	118	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGCATTATTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	35090870	35070216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076747_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ENSMUSG00000026878.18_35070334_35090971_1	chr2	-	2803	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	161	117	17	-117	multi-exon	FALSE	canonical	NA	NA	NA	NA	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGTTTTTGTGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	35090971	35070333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ENSMUSG00000026878.18_35070437_35091132_1	chr2	-	2856	8	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	0	-220	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAACAAATCACCCAT	NA	NA	NA	NA	NA	NA	NA	NA	35091132	35070436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_35072460_35073404_35073436_35073760_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ENSMUSG00000026878.18_35070449_35091132_1	chr2	-	2849	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	0	232	0	-232	multi-exon	FALSE	canonical	NA	NA	NA	NA	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATATATTTACAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35091132	35070448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ENSMUSG00000026879.15_35146396_35193354_1	chr2	+	1945	14	ISM	ENSMUSG00000026879.15	ENSMUST00000201185.4	2607	18	4	4548	4	-4548	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGGGGACCCACCAATTC	NA	NA	NA	NA	NA	NA	NA	NA	35146395	35193354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_35146486_35156831_35156916_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179
ENSMUSG00000026879.15_35156886_35194302_1	chr2	+	1828	14	ISM	ENSMUSG00000026879.15	ENSMUST00000201185.4	2607	18	10494	3600	10494	-3600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCCTACCGCACATCC	NA	NA	NA	NA	NA	NA	NA	NA	35156885	35194302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_35156916_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275
ENSMUSG00000026879.15_35172392_35186161_1	chr2	+	1142	8	ISM	ENSMUSG00000026879.15	ENSMUST00000028239.8	2653	17	0	11743	0	-11741	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCTGCCCTCAAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	35172391	35186161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_35172614_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136
ENSMUSG00000026879.15_35172525_35186426_1	chr2	+	1122	9	ISM	ENSMUSG00000026879.15	ENSMUST00000028239.8	2653	17	133	11478	133	-11476	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAACTGGCGGGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	35172524	35186426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_35172614_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377
ENSMUSG00000026879.15_35173915_35194400_1	chr2	+	1898	13	ISM	ENSMUSG00000026879.15	ENSMUST00000028239.8	2653	17	1523	3504	1523	-3502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3480	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTGGAGGTGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	35173914	35194400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275
ENSMUSG00000026879.15_35174072_35196582_1	chr2	+	1844	15	ISM	ENSMUSG00000026879.15	ENSMUST00000028239.8	2653	17	1680	1322	1680	-1320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3055	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAGGAAGAGGAAAAGACG	NA	NA	NA	NA	NA	NA	NA	NA	35174071	35196582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557
ENSMUSG00000026879.15_35174747_35197582_1	chr2	+	1843	15	ISM	ENSMUSG00000026879.15	ENSMUST00000028239.8	2653	17	2355	322	2355	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTCCTTCCTTCGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	35174746	35197582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
ENSMUSG00000026879.15_35180343_35197762_1	chr2	+	1931	14	ISM	ENSMUSG00000026879.15	ENSMUST00000028239.8	2653	17	7951	142	7951	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5893	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGATGTGTGCGCGCGT	NA	NA	NA	NA	NA	NA	NA	NA	35180342	35197762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
ENSMUSG00000026879.15_35182599_35197904_1	chr2	+	1909	13	ISM	ENSMUSG00000026879.15	ENSMUST00000028239.8	2653	17	10207	0	10207	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4644	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCCCAGGTGTCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	35182598	35197904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
ENSMUSG00000026880.12_35205996_35210411_1	chr2	-	141	2	ISM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	16577	1998	16577	-1998	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGCCCTTCAGCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	35210411	35205995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_35206068_35210342
ENSMUSG00000026880.12_35215334_35216504_1	chr2	-	137	2	ISM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	10484	11336	10484	-11336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACCAGGTCAGTACTCGA	NA	NA	NA	NA	NA	NA	NA	NA	35216504	35215333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_35215399_35216432
ENSMUSG00000026885.14_35641674_35793108_1	chr2	-	2022	7	ISM	ENSMUSG00000026885.14	ENSMUST00000028248.11	3176	10	76528	421	76528	-421	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTTTAATACTAATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	35793108	35641673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_35642505_35674100_35674208_35685368_35685615_35707734_35707834_35779276_35779393_35780283_35780380_35792581
ENSMUSG00000026887.10_36026410_36079660_1	chr2	+	1615	7	FSM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	9	999	9	491	multi-exon	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCAGTTTTTGCCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	36026409	36079660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_36026712_36031457_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
ENSMUSG00000026887.10_36026512_36079724_1	chr2	+	1577	7	FSM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	111	935	111	555	multi-exon	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGCCCTGTTTACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	36026511	36079724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_36026712_36031457_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
ENSMUSG00000026887.10_36026646_36079837_1	chr2	+	1556	7	FSM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	245	822	245	668	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTAGTCTATATCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	36026645	36079837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_36026712_36031457_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
ENSMUSG00000026887.10_36031522_36079170_2	chr2	+	599	5	FSM	ENSMUSG00000026887.10	ENST00000394315.3	650	5	52	-1	52	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCACAGCCGGACACCG	NA	NA	NA	NA	NA	NA	NA	NA	36031521	36079170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36079086
ENSMUSG00000026887.10_36031545_36079976_1	chr2	+	1542	6	ISM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	5144	683	75	-683	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCAGCATTTACTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	36031544	36079976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
ENSMUSG00000026887.10_36031604_36080047_1	chr2	+	1554	6	ISM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	5203	612	134	-612	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTTGTGTGCCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	36031603	36080047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
ENSMUSG00000026887.10_36037953_36080151_1	chr2	+	1554	5	ISM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	11552	508	6483	-508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCAAGTACCCTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	36037952	36080151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
ENSMUSG00000026887.10_36038056_36080276_1	chr2	+	1576	5	ISM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	11655	383	6586	-383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTATTTGTAATCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	36038055	36080276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
ENSMUSG00000026887.10_36043685_36080380_1	chr2	+	1585	4	ISM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	17284	279	12215	-279	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTGGGGGGATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	36043684	36080380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_36043724_36049610_36049703_36067126_36067287_36079086
ENSMUSG00000026889.13_36007154_36012901_1	chr2	-	957	3	ISM	ENSMUSG00000026889.13	ENSMUST00000122456.8	781	5	13722	-484	13722	484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCAGCTTTTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	36012901	36007153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_36007987_36010824_36010911_36012863
ENSMUSG00000026889.13_36007301_36017179_1	chr2	-	902	4	ISM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	9606	1210	9444	337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATGTTGTAGCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	36017179	36007300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136
ENSMUSG00000026889.13_36007353_36017243_1	chr2	-	914	4	ISM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	9542	1262	9380	285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCAGTTGAATTCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	36017243	36007352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136
ENSMUSG00000026889.13_36007605_36026588_1	chr2	-	906	6	FSM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	197	1514	35	33	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGAGATGCGCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	36026588	36007604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36026493
ENSMUSG00000026889.13_36007780_36026785_1	chr2	-	928	6	FSM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	0	1689	0	-142	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTTCGCCTCTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	36026785	36007779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36026493
ENSMUSG00000026890.20_35973305_35980989_1	chr2	-	903	3	ISM	ENSMUSG00000026890.20	ENST00000559895.5	3277	7	7582	1336	7582	394	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGCGGAGTTTCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	35980989	35973304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_35974088_35977379_35977484_35980973
ENSMUSG00000026890.20_35973364_35981053_1	chr2	-	908	3	ISM	ENSMUSG00000026890.20	ENST00000559895.5	3277	7	7518	1395	7518	335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTACGCTGGACTTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	35981053	35973363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_35974088_35977379_35977484_35980973
ENSMUSG00000026890.20_35973529_35981395_1	chr2	-	902	4	ISM	ENSMUSG00000026890.20	ENST00000559895.5	3277	7	7176	1560	7176	170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCTGGTTATGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	35981395	35973528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_35974088_35977379_35977484_35980973_35981149_35981331
ENSMUSG00000026890.20_35973699_35984285_1	chr2	-	926	6	ISM	ENSMUSG00000026890.20	ENST00000559895.5	3277	7	4286	1730	4286	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTCTCCCCCACATTG	NA	NA	NA	NA	NA	NA	NA	NA	35984285	35973698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_35974088_35977379_35977484_35980973_35981149_35981331_35981428_35981617_35981719_35984224
ENSMUSG00000026890.20_35973946_35988184_1	chr2	-	913	7	FSM	ENSMUSG00000026890.20	ENST00000559895.5	3277	7	387	1977	387	-247	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCCTCTGCCAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	35988184	35973945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_35974088_35977379_35977484_35980973_35981149_35981331_35981428_35981617_35981719_35984224_35984446_35988110
ENSMUSG00000026890.20_35974015_35988232_1	chr2	-	892	7	FSM	ENSMUSG00000026890.20	ENST00000559895.5	3277	7	339	2046	339	-316	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCTGAGATCCAGCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	35988232	35974014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_35974088_35977379_35977484_35980973_35981149_35981331_35981428_35981617_35981719_35984224_35984446_35988110
ENSMUSG00000026890.20_35974058_35988290_1	chr2	-	907	7	FSM	ENSMUSG00000026890.20	ENST00000559895.5	3277	7	281	2089	281	-359	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTGCACATCTGTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	35988290	35974057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_35974088_35977379_35977484_35980973_35981149_35981331_35981428_35981617_35981719_35984224_35984446_35988110
ENSMUSG00000026895.8_35926338_35939418_1	chr2	-	866	4	NNC	ENSMUSG00000026895.8	novel	861	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTGTTTTATTATGCT	NA	NA	NA	NA	NA	NA	NA	NA	35939418	35926337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_35926654_35929718_35929890_35934361_35934526_35939203
ENSMUSG00000026895.8_35926338_35939418_2	chr2	-	854	4	NNC	ENSMUSG00000026895.8	novel	861	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTGTTTTATTATGCT	NA	NA	NA	NA	NA	NA	NA	NA	35939418	35926337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_35926654_35929730_35929890_35934361_35934526_35939203
ENSMUSG00000026895.8_35926338_35939418_3	chr2	-	854	4	NNC	ENSMUSG00000026895.8	novel	861	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTGTTTTATTATGCT	NA	NA	NA	NA	NA	NA	NA	NA	35939418	35926337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_35926654_35929723_35929890_35934361_35934519_35939203
ENSMUSG00000026896.15_62428293_62429161_1	chr2	-	263	3	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	47147	93	47147	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTACTCAGAATACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	62429161	62428292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62428433_62428522_62428614_62429129
ENSMUSG00000026896.15_62428401_62429267_1	chr2	-	261	3	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	47041	201	47041	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTGCCTTGTCTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	62429267	62428400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62428433_62428522_62428614_62429129
ENSMUSG00000026896.15_62428593_62431797_1	chr2	-	276	3	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	44511	393	44511	-393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAGCACTGCAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	62431797	62428592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62428614_62429129_62429321_62431733
ENSMUSG00000026896.15_62431837_62435843_1	chr2	-	268	3	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	40465	3637	40465	-3637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTTACCGAACGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	62435843	62431836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62431896_62433763_62433914_62435784
ENSMUSG00000026896.15_62433854_62435984_1	chr2	-	260	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	40324	5654	40324	-5654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACGGTGGCAGAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	62435984	62433853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62433914_62435784
ENSMUSG00000026896.15_62433898_62436043_1	chr2	-	275	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	40265	5698	40265	-5698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTAGTAAATTTCGCACT	NA	NA	NA	NA	NA	NA	NA	NA	62436043	62433897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62433914_62435784
ENSMUSG00000026896.15_62435872_62436617_1	chr2	-	266	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	39691	7672	39691	-7672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGCAAAGTTTGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	62436617	62435871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62436045_62436524
ENSMUSG00000026896.15_62435937_62436670_1	chr2	-	254	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	39638	7737	39638	-7737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCGAGGAATTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	62436670	62435936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62436045_62436524
ENSMUSG00000026896.15_62435982_62436733_1	chr2	-	272	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	39575	7782	39575	-7782	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAGAAACACGATACTG	NA	NA	NA	NA	NA	NA	NA	NA	62436733	62435981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62436045_62436524
ENSMUSG00000026896.15_62436566_62437361_1	chr2	-	280	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	38947	8366	38947	-8366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGACGAAACGGATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	62437361	62436565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62436801_62437316
ENSMUSG00000026896.15_62436667_62439556_1	chr2	-	286	3	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	36752	8467	36752	-8467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAGAAGTTCGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	62439556	62436666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62436801_62437316_62437441_62439528
ENSMUSG00000026896.15_62437317_62440804_1	chr2	-	261	3	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	35504	9117	35504	-9117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTGGGTTTTGACCTA	NA	NA	NA	NA	NA	NA	NA	NA	62440804	62437316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62437441_62439528_62439646_62440784
ENSMUSG00000026896.15_62437372_62440855_1	chr2	-	257	3	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	35453	9172	35453	-9172	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATTTTGGAACCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	62440855	62437371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62437441_62439528_62439646_62440784
ENSMUSG00000026896.15_62439608_62441004_1	chr2	-	258	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	35304	11408	35304	-11408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAGAATCTTGGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	62441004	62439607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62439646_62440784
ENSMUSG00000026896.15_62440824_62442130_1	chr2	-	256	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	34178	12624	34178	-12624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAAAAGCAGTCTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	62442130	62440823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62441003_62442053
ENSMUSG00000026896.15_62440876_62442186_1	chr2	-	260	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	34122	12676	34122	-12676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCCCTGCCGCAGATAC	NA	NA	NA	NA	NA	NA	NA	NA	62442186	62440875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62441003_62442053
ENSMUSG00000026896.15_62440924_62442239_1	chr2	-	265	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	34069	12724	34069	-12724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGCAGAAGCTGAGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	62442239	62440923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62441003_62442053
ENSMUSG00000026896.15_62442141_62447753_1	chr2	-	273	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	28555	13941	28555	-13941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATGTTATTATCAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	62447753	62442140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62442265_62447604
ENSMUSG00000026896.15_62469656_62475908_1	chr2	-	274	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	400	41456	400	-41456	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGGTTTCGTATGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	62475908	62469655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62469843_62475821
ENSMUSG00000026904.18_61876929_62058953_1	chr2	+	671	6	ISM	ENSMUSG00000026904.18	ENST00000375514.9	5662	27	126	98146	0	-96270	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTAAGCCCTATGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	61876928	62058953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_61877037_61978323_61978476_61988549_61988632_62021083_62021231_62041698_62041838_62058910
ENSMUSG00000026904.18_61876989_62064778_1	chr2	+	631	6	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	60	90445	60	-90445	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGTCCACGAAGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	61876988	62064778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_61877037_61988549_61988632_62021083_62021231_62041698_62041838_62058910_62059072_62064724
ENSMUSG00000026904.18_61988612_62064922_1	chr2	+	665	5	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	111683	90301	111683	-90301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTCTACTATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	61988611	62064922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_61988632_62021083_62021231_62041698_62041838_62058910_62059072_62064724
ENSMUSG00000026904.18_62021131_62073772_1	chr2	+	656	5	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	144202	81451	144202	-81451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGCACTGTAGACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	62021130	62073772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62021231_62041698_62041838_62058910_62059072_62064724_62064914_62073705
ENSMUSG00000026904.18_62041780_62080754_1	chr2	+	622	6	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	164851	74469	164851	-74469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGCTGAAGCTTCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	62041779	62080754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62041838_62058910_62059072_62064724_62064914_62073705_62073798_62074695_62074786_62080722
ENSMUSG00000026904.18_62058972_62083694_1	chr2	+	669	6	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	182043	71529	182043	-71529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTACCACGAGATTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	62058971	62083694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62059072_62064724_62064914_62073705_62073798_62074695_62074786_62080722_62080881_62083654
ENSMUSG00000026904.18_62064811_62094360_1	chr2	+	652	6	ISM	ENSMUSG00000026904.18	ENSMUST00000054484.15	5320	25	187882	62714	187882	-60863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGACACAGCGGACCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	62064810	62094360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62064914_62073705_62073798_62080722_62080881_62083654_62083743_62087802_62087950_62094296
ENSMUSG00000026904.18_62064879_62094315_1	chr2	+	629	7	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	187950	60908	187950	-60908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTACCAAATGGAACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	62064878	62094315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62064914_62073705_62073798_62074695_62074786_62080722_62080881_62083654_62083743_62087802_62087950_62094296
ENSMUSG00000026904.18_62073708_62097854_1	chr2	+	694	6	ISM	ENSMUSG00000026904.18	ENSMUST00000054484.15	5320	25	196779	59220	196779	-57369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATGCATGTCTCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	62073707	62097854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62073798_62080722_62080881_62083654_62083743_62087802_62087950_62094296_62094398_62097744
ENSMUSG00000026904.18_62074729_62097821_1	chr2	+	628	6	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	197800	57402	197800	-57402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGCTTAGCATCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	62074728	62097821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62074786_62080722_62080881_62083654_62083743_62087802_62087950_62094296_62094398_62097744
ENSMUSG00000026904.18_62080736_62098510_1	chr2	+	682	6	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	203807	56713	203807	-56713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGACCGGGATAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	62080735	62098510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62080881_62083654_62083743_62087802_62087950_62094296_62094398_62097744_62097920_62098484
ENSMUSG00000026904.18_62080819_62098528_1	chr2	+	617	6	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	203890	56695	203890	-56695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTCTCTTTTTGGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	62080818	62098528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62080881_62083654_62083743_62087802_62087950_62094296_62094398_62097744_62097920_62098484
ENSMUSG00000026904.18_62080855_62098618_1	chr2	+	671	6	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	203926	56605	203926	-56605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTATTGTGACTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	62080854	62098618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62080881_62083654_62083743_62087802_62087950_62094296_62094398_62097744_62097920_62098484
ENSMUSG00000026904.18_62083709_62099122_1	chr2	+	709	6	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	206780	56101	206780	-56101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGAAGAGGCTTTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	62083708	62099122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62083743_62087802_62087950_62094296_62094398_62097744_62097920_62098484_62098619_62099004
ENSMUSG00000026904.18_62094345_62112249_1	chr2	+	640	5	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	217416	42974	217416	-42974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACACACTGAAGGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	62094344	62112249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62094398_62097744_62097920_62098484_62098619_62099004_62099251_62112217
ENSMUSG00000026904.18_62097766_62117176_1	chr2	+	671	5	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	220837	38047	220837	-38047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGAGCCTGTGGCCATGGC	NA	NA	NA	NA	NA	NA	NA	NA	62097765	62117176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62097920_62098484_62098619_62099004_62099251_62112217_62112324_62117145
ENSMUSG00000026904.18_62097836_62117212_1	chr2	+	637	5	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	220907	38011	220907	-38011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCTCTTCTGGTCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	62097835	62117212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62097920_62098484_62098619_62099004_62099251_62112217_62112324_62117145
ENSMUSG00000026904.18_62097888_62117292_1	chr2	+	665	5	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	220959	37931	220959	-37931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCCCAACCAAGGTACT	NA	NA	NA	NA	NA	NA	NA	NA	62097887	62117292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62097920_62098484_62098619_62099004_62099251_62112217_62112324_62117145
ENSMUSG00000026904.18_62098552_62119103_1	chr2	+	633	5	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	221623	36120	221623	-36120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATTGACTATGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	62098551	62119103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62098619_62099004_62099251_62112217_62112324_62117145_62117308_62119051
ENSMUSG00000026904.18_62099042_62120324_1	chr2	+	662	5	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	222113	34899	222113	-34899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATCCCAGCTTTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	62099041	62120324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62099251_62112217_62112324_62117145_62117308_62119051_62119166_62120253
ENSMUSG00000026904.18_62099101_62120375_1	chr2	+	654	5	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	222172	34848	222172	-34848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGCTGTCATCATCAACA	NA	NA	NA	NA	NA	NA	NA	NA	62099100	62120375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62099251_62112217_62112324_62117145_62117308_62119051_62119166_62120253
ENSMUSG00000026904.18_62112287_62127300_1	chr2	+	676	5	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	235358	27923	235358	-27923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTTTATTCTTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	62112286	62127300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62112324_62117145_62117308_62119051_62119166_62120253_62120416_62127099
ENSMUSG00000026904.18_62120276_62135015_1	chr2	+	654	5	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	243347	20208	243347	-20208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAAGTTGATGGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	62120275	62135015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62120416_62127099_62127352_62128495_62128565_62134147_62134322_62134996
ENSMUSG00000026904.18_62120354_62135058_1	chr2	+	619	5	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	243425	20165	243425	-20165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTGATGATTTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	62120353	62135058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62120416_62127099_62127352_62128495_62128565_62134147_62134322_62134996
ENSMUSG00000026904.18_62120396_62135119_1	chr2	+	638	5	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	243467	20104	243467	-20104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTCAGAAAAAAATCGG	NA	NA	NA	NA	NA	NA	NA	NA	62120395	62135119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62120416_62127099_62127352_62128495_62128565_62134147_62134322_62134996
ENSMUSG00000026904.18_62127160_62155167_1	chr2	+	657	5	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	250231	56	250231	-56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAGAAGAGTGTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	62127159	62155167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62127352_62128495_62128565_62134147_62134322_62134996_62135120_62155068
ENSMUSG00000026904.18_62127243_62155214_1	chr2	+	621	5	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	250314	9	250314	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTAAACCCTCTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	62127242	62155214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62127352_62128495_62128565_62134147_62134322_62134996_62135120_62155068
ENSMUSG00000026904.18_62134179_62155224_1	chr2	+	646	6	ISM	ENSMUSG00000026904.18	ENST00000446997.6	5490	27	257295	1846	257250	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTCCCATCCCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	62134178	62155224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62134322_62134996_62135120_62143625_62143694_62146908_62147026_62147819_62147859_62155068
ENSMUSG00000026904.18_62146948_62155620_1	chr2	+	669	3	ISM	ENSMUSG00000026904.18	ENST00000446997.6	5490	27	270064	1450	270019	397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAATATGAAACATTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	62146947	62155620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62147026_62147819_62147859_62155068
ENSMUSG00000026904.18_62147005_62155721_1	chr2	+	713	3	ISM	ENSMUSG00000026904.18	ENST00000446997.6	5490	27	270121	1349	270076	498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTTCACTTAGAATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	62147004	62155721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_62147026_62147819_62147859_62155068
ENSMUSG00000026914.16_61542038_61630720_1	chr2	+	1533	12	NNC	ENSMUSG00000026914.16	novel	1541	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCGAGGTCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	61542037	61630720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594188_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ENSMUSG00000026914.16_61542038_61630720_2	chr2	+	1534	12	NNC	ENSMUSG00000026914.16	novel	1541	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCGAGGTCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	61542037	61630720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595199_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ENSMUSG00000026914.16_61591002_61615909_1	chr2	+	697	7	FSM	ENSMUSG00000026914.16	ENST00000427142.1	711	7	19	-5	19	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTTGTTTCTTCACAAT	NA	NA	NA	NA	NA	NA	NA	NA	61591001	61615909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_61591052_61591318_61591429_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777
ENSMUSG00000026915.17_37473484_37490915_1	chr2	-	1239	6	ISM	ENSMUSG00000026915.17	ENSMUST00000028279.10	16348	17	46382	13604	46382	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTTATCTTATTATT	NA	NA	NA	NA	NA	NA	NA	NA	37490915	37473483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756
ENSMUSG00000026915.17_37473829_37493992_1	chr2	-	1153	8	ISM	ENSMUSG00000026915.17	ENSMUST00000028279.10	16348	17	43305	13949	43305	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCATTCCTGGAAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	37493992	37473828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933
ENSMUSG00000026915.17_37474034_37514578_1	chr2	-	1168	10	ISM	ENSMUSG00000026915.17	ENSMUST00000028279.10	16348	17	22719	14154	22719	-550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTCATTCCTATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	37514578	37474033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504
ENSMUSG00000026915.17_37486746_37517538_1	chr2	-	1208	10	ISM	ENSMUSG00000026915.17	ENSMUST00000028279.10	16348	17	19759	26866	19759	-13262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAGAAAAAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	37517538	37486745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446
ENSMUSG00000026915.17_37489151_37525556_1	chr2	-	1200	10	ISM	ENSMUSG00000026915.17	ENSMUST00000028279.10	16348	17	11741	29271	11741	-15667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCTTTGTAATGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	37525556	37489150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435
ENSMUSG00000026915.17_37490811_37530996_1	chr2	-	1187	10	ISM	ENSMUSG00000026915.17	ENSMUST00000028279.10	16348	17	6301	30931	6301	-17327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCAAGCAATAATACTGG	NA	NA	NA	NA	NA	NA	NA	NA	37530996	37490810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862
ENSMUSG00000026915.17_37492985_37535563_1	chr2	-	1157	10	ISM	ENSMUSG00000026915.17	ENSMUST00000028279.10	16348	17	1734	33105	1734	-19501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATCCAAGAAAACAGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	37535563	37492984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482
ENSMUSG00000026915.17_37493076_37535655_1	chr2	-	1158	10	ISM	ENSMUSG00000026915.17	ENSMUST00000028279.10	16348	17	1642	33196	1642	-19592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGCTTTTGTCACAATC	NA	NA	NA	NA	NA	NA	NA	NA	37535655	37493075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482
ENSMUSG00000026915.17_37493991_37537126_1	chr2	-	1143	10	ISM	ENSMUSG00000026915.17	ENST00000360998.3	2950	18	56217	20507	171	-20507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGATTGGGGGATGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	37537126	37493990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537061
ENSMUSG00000026915.17_37514183_37537231_1	chr2	-	1214	9	ISM	ENSMUSG00000026915.17	ENST00000360998.3	2950	18	56112	40699	66	-40699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATGAAAGTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	37537231	37514182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537061
ENSMUSG00000026915.17_37514220_37537231_1	chr2	-	1177	9	ISM	ENSMUSG00000026915.17	ENST00000360998.3	2950	18	56112	40736	66	-40736	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAGTATTCCTGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	37537231	37514219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537061
ENSMUSG00000026915.17_37515203_37593319_1	chr2	-	1171	8	ISM	ENSMUSG00000026915.17	ENST00000360998.3	2950	18	24	41719	24	-41719	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTACTTCCTGGTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	37593319	37515202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537061_37537298_37593203
ENSMUSG00000026917.16_27405169_27426128_1	chr2	+	2471	14	FSM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	0	419	0	-419	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCTTTCTCCCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	27405168	27426128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ENSMUSG00000026917.16_27405278_27426158_1	chr2	+	2392	14	FSM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	109	389	109	-389	multi-exon	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATCCAAAGGTATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	27405277	27426158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ENSMUSG00000026917.16_27408728_27426268_1	chr2	+	2400	13	ISM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	3559	279	12	-279	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACACTGACATGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	27408727	27426268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ENSMUSG00000026917.16_27408766_27425131_1	chr2	+	1072	11	NNC	ENSMUSG00000026917.16	novel	1131	11	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTCATGGGTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	27408765	27425131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_27408805_27409360_27409464_27410558_27410675_27410839_27410915_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ENSMUSG00000026917.16_27408766_27425131_3	chr2	+	1080	11	NNC	ENSMUSG00000026917.16	novel	1131	11	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTCATGGGTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	27408765	27425131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_27408805_27409361_27409464_27410558_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ENSMUSG00000026917.16_27408766_27425131_4	chr2	+	1081	11	FSM	ENSMUSG00000026917.16	ENST00000513652.1	1131	11	50	0	50	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTCATGGGTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	27408765	27425131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_27408805_27409360_27409464_27410558_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ENSMUSG00000026917.16_27409392_27426389_1	chr2	+	2413	12	ISM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	4223	158	676	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGGTGTGCGGCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	27409391	27426389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ENSMUSG00000026917.16_27409442_27426444_1	chr2	+	2418	12	ISM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	4273	103	726	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCCCCGAGTATAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	27409441	27426444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ENSMUSG00000026917.16_27409773_27426547_1	chr2	+	2475	11	ISM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	4604	0	1057	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	27409772	27426547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ENSMUSG00000026918.17_27335612_27339231_1	chr2	-	3000	2	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	26179	21	14897	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAAAAAGGGAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	27339231	27335611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212
ENSMUSG00000026918.17_27335722_27339282_1	chr2	-	2941	2	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	26128	131	14846	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGCCGGCCTCAACACC	NA	NA	NA	NA	NA	NA	NA	NA	27339282	27335721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212
ENSMUSG00000026918.17_27335832_27340344_1	chr2	-	2963	3	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	25066	241	13784	-220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGTTTACCGTAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	27340344	27335831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268
ENSMUSG00000026918.17_27335894_27340383_1	chr2	-	2940	3	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	25027	303	13745	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTATATATATATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	27340383	27335893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268
ENSMUSG00000026918.17_27335961_27340449_1	chr2	-	2939	3	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	24961	370	13679	-349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTAAAGCTTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	27340449	27335960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268
ENSMUSG00000026918.17_27336152_27342934_1	chr2	-	2950	4	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	22476	561	11194	-540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTCTACAGGCTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	27342934	27336151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844
ENSMUSG00000026918.17_27336218_27342991_1	chr2	-	2941	4	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	22419	627	11137	-606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCCATCCCCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	27342991	27336217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844
ENSMUSG00000026918.17_27336328_27344368_1	chr2	-	2970	5	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	21042	737	9760	-716	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCATTGGTGCTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	27344368	27336327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324
ENSMUSG00000026918.17_27336398_27344416_1	chr2	-	2948	5	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	20994	807	9712	-786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTACAGAGCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	27344416	27336397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324
ENSMUSG00000026918.17_27336530_27346953_1	chr2	-	2949	6	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	18457	939	7175	-918	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGGCCTACCATGACAG	NA	NA	NA	NA	NA	NA	NA	NA	27346953	27336529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920
ENSMUSG00000026918.17_27336592_27347010_1	chr2	-	2944	6	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	18400	1001	7118	-980	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGTGACTGTAAGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	27347010	27336591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920
ENSMUSG00000026918.17_27336673_27347049_1	chr2	-	2902	6	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	18361	1082	7079	-1061	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTTTAAGGTTCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	27347049	27336672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920
ENSMUSG00000026918.17_27336793_27349689_1	chr2	-	3003	7	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	15721	1202	4439	1062	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCAGTGGGTGTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	27349689	27336792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468
ENSMUSG00000026918.17_27337137_27351755_1	chr2	-	3025	8	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	13655	1546	2373	718	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATCTCTGAGCATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	27351755	27337136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540
ENSMUSG00000026918.17_27337246_27352471_1	chr2	-	2955	9	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	12939	1655	1657	609	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTTCTATTGTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	27352471	27337245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432
ENSMUSG00000026918.17_27337306_27352524_1	chr2	-	2948	9	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	12886	1715	1604	549	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAGCTTTGTATGTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	27352524	27337305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432
ENSMUSG00000026918.17_27337415_27353520_1	chr2	-	2949	10	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	11890	1824	608	440	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGCCCTTCAGCTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	27353520	27337414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466
ENSMUSG00000026918.17_27337460_27353586_1	chr2	-	2970	10	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	11824	1869	542	395	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTTTTTTTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	27353586	27337459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466
ENSMUSG00000026918.17_27337584_27353977_1	chr2	-	2941	11	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	11433	1993	151	271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTGAGAAGAACATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	27353977	27337583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900
ENSMUSG00000026918.17_27337636_27354028_1	chr2	-	2940	11	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	11382	2045	100	219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAATGAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	27354028	27337635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900
ENSMUSG00000026918.17_27337693_27354128_1	chr2	-	2983	11	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	11282	2102	0	162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCACCCCAGGTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	27354128	27337692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900
ENSMUSG00000026918.17_27337855_27365619_1	chr2	-	2929	12	FSM	ENSMUSG00000026918.17	ENSMUST00000077737.13	5272	12	79	2264	66	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAACAAACAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	27365619	27337854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ENSMUSG00000026922.14_26483069_26484867_1	chr2	-	782	2	ISM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	9477	0	9387	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTAGAGTTCTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	26484867	26483068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26483775_26484791
ENSMUSG00000026922.14_26483203_26486145_1	chr2	-	699	3	ISM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	8199	134	8109	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAGCACCAGAGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	26486145	26483202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26483775_26484791_26484865_26486091
ENSMUSG00000026922.14_26483266_26486187_1	chr2	-	678	3	ISM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	8157	197	8067	156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGTATCAGGCCATCAT	NA	NA	NA	NA	NA	NA	NA	NA	26486187	26483265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26483775_26484791_26484865_26486091
ENSMUSG00000026922.14_26483421_26486478_1	chr2	-	699	4	ISM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	7866	352	7776	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACTTCCCACCTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	26486478	26483420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302
ENSMUSG00000026922.14_26483421_26487351_1	chr2	-	739	4	ISM	ENSMUSG00000026922.14	ENST00000371694.7	950	5	6903	-1	6903	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACTTCCCACCTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	26487351	26483420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26483775_26484791_26484865_26486302_26486479_26487215
ENSMUSG00000026922.14_26483550_26494107_1	chr2	-	771	6	FSM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	237	481	147	-128	multi-exon	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAGAAGGCCACGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	26494107	26483549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
ENSMUSG00000026922.14_26483550_26494107_2	chr2	-	675	5	FSM	ENSMUSG00000026922.14	ENST00000371694.7	950	5	147	128	147	-128	multi-exon	FALSE	canonical	NA	NA	NA	NA	1633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAGAAGGCCACGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	26494107	26483549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26483775_26484791_26484865_26486302_26486479_26487215_26487350_26494040
ENSMUSG00000026922.14_26483659_26494223_1	chr2	-	682	5	FSM	ENSMUSG00000026922.14	ENST00000371694.7	950	5	31	237	31	-237	multi-exon	FALSE	canonical	NA	NA	NA	NA	1245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGATTCCCCAAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	26494223	26483658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26483775_26484791_26484865_26486302_26486479_26487215_26487350_26494040
ENSMUSG00000026922.14_26483659_26494223_2	chr2	-	778	6	FSM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	121	590	31	-237	multi-exon	FALSE	canonical	NA	NA	NA	NA	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGATTCCCCAAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	26494223	26483658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
ENSMUSG00000026922.14_26484791_26494344_1	chr2	-	784	5	ISM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	0	1722	0	-1369	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCCATCAGCACACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	26494344	26484790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
ENSMUSG00000026925.17_26286935_26297982_1	chr2	-	2243	10	FSM	ENSMUSG00000026925.17	ENSMUST00000145701.8	4147	10	1230	674	1157	371	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCATCCCAGGTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	26297982	26286934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
ENSMUSG00000026925.17_26287544_26298650_1	chr2	-	2302	10	FSM	ENSMUSG00000026925.17	ENSMUST00000145701.8	4147	10	562	1283	489	-238	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCCTCCTAGTAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	26298650	26287543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
ENSMUSG00000026925.17_26287710_26298742_1	chr2	-	2228	10	FSM	ENSMUSG00000026925.17	ENSMUST00000145701.8	4147	10	470	1449	397	-404	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACATTTATACCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	26298742	26287709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
ENSMUSG00000026925.17_26288593_26299139_1	chr2	-	2326	9	ISM	ENSMUSG00000026925.17	ENSMUST00000114090.8	2790	11	0	1287	0	-1287	intron_retention	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGTGAGGCCAGGACGA	NA	NA	NA	NA	NA	NA	NA	NA	26299139	26288592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
ENSMUSG00000026926.15_26279351_26283216_1	chr2	+	1132	9	ISM	ENSMUSG00000026926.15	ENSMUST00000114093.2	1638	11	-9	737	0	-737	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTACTAGGCTGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	26279350	26283216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097
ENSMUSG00000026926.15_26279946_26283399_1	chr2	+	1131	9	ISM	ENSMUSG00000026926.15	ENSMUST00000114093.2	1638	11	586	554	586	-554	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGACAGCACCCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	26279945	26283399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308
ENSMUSG00000026926.15_26280101_26285098_1	chr2	+	1101	11	ISM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	750	2036	741	1145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGATTTTTGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	26280100	26285098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036
ENSMUSG00000026926.15_26280506_26285486_1	chr2	+	1111	10	ISM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	1155	1648	1146	1533	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGGCTGCCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	26280505	26285486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ENSMUSG00000026926.15_26281900_26285655_1	chr2	+	1079	8	ISM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	2549	1479	2540	-1479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCATAAGGCTAGCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	26281899	26285655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ENSMUSG00000026926.15_26282539_26285831_1	chr2	+	1061	7	ISM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	3188	1303	3179	-1303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTGGAGCAAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	26282538	26285831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ENSMUSG00000026926.15_26282565_26285908_1	chr2	+	1112	7	ISM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	3214	1226	3205	-1226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACACAGGGCCTACCCATT	NA	NA	NA	NA	NA	NA	NA	NA	26282564	26285908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ENSMUSG00000026926.15_26283149_26286109_1	chr2	+	1046	5	ISM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	3798	1025	3789	-1025	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGCTTAAGTTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	26283148	26286109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ENSMUSG00000026926.15_26283193_26286166_1	chr2	+	1059	5	ISM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	3842	968	3833	-968	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAGATAAAATACTAATT	NA	NA	NA	NA	NA	NA	NA	NA	26283192	26286166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ENSMUSG00000026926.15_26283378_26286284_1	chr2	+	1084	4	ISM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	4027	850	4018	-850	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTTAATTTCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	26283377	26286284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26283400_26283529_26283593_26285036_26285182_26285430
ENSMUSG00000026926.15_26285090_26286389_1	chr2	+	1051	2	ISM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	5739	745	5730	-745	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTTTGCCCCCCGACCC	NA	NA	NA	NA	NA	NA	NA	NA	26285089	26286389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26285182_26285430
ENSMUSG00000026926.15_26285143_26286449_1	chr2	+	1058	2	ISM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	5792	685	5783	-685	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGGATTACCTCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	26285142	26286449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26285182_26285430
ENSMUSG00000026927.18_26275564_26279203_1	chr2	-	699	5	ISM	ENSMUSG00000026927.18	ENSMUST00000077983.13	1955	8	106	2750	100	-2750	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACCTCGAGTCAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	26279203	26275563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26279160
ENSMUSG00000026927.18_26276001_26279295_1	chr2	-	734	4	ISM	ENSMUSG00000026927.18	ENSMUST00000077983.13	1955	8	14	3187	8	-3187	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAAACTTGTAGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	26279295	26276000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26276076_26276915_26277324_26277567_26277684_26279160
ENSMUSG00000026932.15_25948608_25951654_1	chr2	-	1948	2	ISM	ENSMUSG00000026932.15	ENSMUST00000114159.9	6675	6	30535	3061	30535	-3061	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTACTTTCCCAAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	25951654	25948607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25950486_25951584
ENSMUSG00000026932.15_25948718_25952262_1	chr2	-	1925	3	ISM	ENSMUSG00000026932.15	ENSMUST00000114159.9	6675	6	29927	3171	29927	-3171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCAGAAACTTAGACTATC	NA	NA	NA	NA	NA	NA	NA	NA	25952262	25948717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25950486_25951584_25951683_25952203
ENSMUSG00000026932.15_25948839_25954579_1	chr2	-	1965	4	ISM	ENSMUSG00000026932.15	ENSMUST00000114159.9	6675	6	27610	3292	27610	-3292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGGACACTGCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	25954579	25948838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465
ENSMUSG00000026932.15_25949022_25979687_1	chr2	-	1966	5	ISM	ENSMUSG00000026932.15	ENSMUST00000114159.9	6675	6	2502	3475	2502	-3475	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	25979687	25949021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554
ENSMUSG00000026932.15_25949573_25980204_1	chr2	-	1932	5	ISM	ENSMUSG00000026932.15	ENSMUST00000114159.9	6675	6	1985	4026	1985	-4026	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCAGACACGACACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	25980204	25949572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554
ENSMUSG00000026932.15_25949631_25980261_1	chr2	-	1931	5	ISM	ENSMUSG00000026932.15	ENSMUST00000114159.9	6675	6	1928	4084	1928	-4084	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTTATTCCCCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	25980261	25949630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554
ENSMUSG00000026932.15_25949927_26012800_1	chr2	-	1968	6	FSM	ENSMUSG00000026932.15	ENSMUST00000028300.6	6378	6	30	4380	30	-4380	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGCGTTACTAATACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	26012800	25949926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980495_26012700
ENSMUSG00000026932.15_25949971_26012810_1	chr2	-	1934	6	FSM	ENSMUSG00000026932.15	ENSMUST00000028300.6	6378	6	20	4424	20	-4424	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGGCAAGGCCAGCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	26012810	25949970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980495_26012700
ENSMUSG00000026933.18_25818921_25823723_1	chr2	-	1242	2	NNC	ENSMUSG00000026933.18	novel	5864	17	NA	NA	49287	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTTTCCACCCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	25823723	25818920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_25820038_25823598
ENSMUSG00000026933.18_25819017_25825576_1	chr2	-	1359	4	ISM	ENSMUSG00000026933.18	ENSMUST00000183461.8	5090	17	47718	-721	47434	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCCGGCAGCTAAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	25825576	25819016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25820038_25823602_25823722_25824231_25824348_25825473
ENSMUSG00000026933.18_25819131_25825927_1	chr2	-	1311	5	NIC	ENSMUSG00000026933.18	novel	5864	17	NA	NA	47083	-114	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAAATCGGTAAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	25825927	25819130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_25820038_25823602_25823722_25824231_25824348_25825473_25825577_25825861
ENSMUSG00000026933.18_25819193_25825974_1	chr2	-	1296	5	NIC	ENSMUSG00000026933.18	novel	5864	17	NA	NA	47036	-176	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAACCTGTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	25825974	25819192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_25820038_25823602_25823722_25824231_25824348_25825473_25825577_25825861
ENSMUSG00000026933.18_25819245_25826031_1	chr2	-	1301	5	NIC	ENSMUSG00000026933.18	novel	5864	17	NA	NA	46979	-228	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGCCAACCTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	25826031	25819244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_25820038_25823602_25823722_25824231_25824348_25825473_25825577_25825861
ENSMUSG00000026933.18_25819411_25826663_1	chr2	-	1311	6	NIC	ENSMUSG00000026933.18	novel	5864	17	NA	NA	46347	327	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCCCTGTGCACATTGC	NA	NA	NA	NA	NA	NA	NA	NA	25826663	25819410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_25820038_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526
ENSMUSG00000026933.18_25819572_25828096_1	chr2	-	1289	7	NIC	ENSMUSG00000026933.18	novel	5864	17	NA	NA	44914	166	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGAGTGAGTCCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	25828096	25819571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_25820038_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957
ENSMUSG00000026933.18_25819738_25828311_1	chr2	-	1338	7	NIC	ENSMUSG00000026933.18	novel	5090	17	NA	NA	44699	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCAACCAGGACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	25828311	25819737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_25820038_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957
ENSMUSG00000026933.18_25819738_25828349_1	chr2	-	1376	7	NIC	ENSMUSG00000026933.18	novel	5090	17	NA	NA	44661	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCAACCAGGACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	25828349	25819737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_25820038_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957
ENSMUSG00000026933.18_25823612_25828533_1	chr2	-	1251	6	ISM	ENSMUSG00000026933.18	ENST00000409386.3	5566	18	44477	4595	44477	-3874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGGAGGCAAGTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	25828533	25823611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957
ENSMUSG00000026933.18_25823646_25828604_1	chr2	-	1288	6	ISM	ENSMUSG00000026933.18	ENST00000409386.3	5566	18	44406	4629	44406	-3908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTGGAAAAGTGAATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	25828604	25823645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957
ENSMUSG00000026933.18_25823699_25828692_1	chr2	-	1323	6	ISM	ENSMUSG00000026933.18	ENST00000409386.3	5566	18	44318	4682	44318	-3961	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAGCAAATCAAACAAACC	NA	NA	NA	NA	NA	NA	NA	NA	25828692	25823698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957
ENSMUSG00000026933.18_25824324_25828797_1	chr2	-	1313	5	ISM	ENSMUSG00000026933.18	ENST00000409386.3	5566	18	44213	5307	44213	-4586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTGAGCCGCAACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	25828797	25824323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957
ENSMUSG00000026933.18_25825896_25828941_1	chr2	-	1296	3	ISM	ENSMUSG00000026933.18	ENSMUST00000183461.8	5090	17	44353	6158	44069	-6158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCGACTCTGGCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	25828941	25825895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25826071_25826526_25826664_25827957
ENSMUSG00000026933.18_25825949_25828991_1	chr2	-	1293	3	ISM	ENSMUSG00000026933.18	ENSMUST00000183461.8	5090	17	44303	6211	44019	-6211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAATCAAAGCCTAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	25828991	25825948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25826071_25826526_25826664_25827957
ENSMUSG00000026933.18_25826011_25829031_1	chr2	-	1271	3	ISM	ENSMUSG00000026933.18	ENSMUST00000183461.8	5090	17	44263	6273	43979	-6273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACAGGAATACTTACGGA	NA	NA	NA	NA	NA	NA	NA	NA	25829031	25826010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25826071_25826526_25826664_25827957
ENSMUSG00000026933.18_25826562_25829173_1	chr2	-	1318	2	ISM	ENSMUSG00000026933.18	ENSMUST00000183461.8	5090	17	44121	6824	43837	-6824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCAGAAGTGGAGCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	25829173	25826561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25826664_25827957
ENSMUSG00000026933.18_25826628_25829216_1	chr2	-	1295	2	ISM	ENSMUSG00000026933.18	ENSMUST00000183461.8	5090	17	44078	6890	43794	-6890	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCAGCCTTCCTTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	25829216	25826627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25826664_25827957
ENSMUSG00000026933.18_25828319_25855771_1	chr2	-	2952	10	ISM	ENSMUSG00000026933.18	ENST00000409386.3	5566	18	17239	9302	17239	-8581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	730	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCCAGGCGGGGAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	25855771	25828318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25845271_25845305_25846258_25846340_25855674
ENSMUSG00000026933.18_25828784_25872907_1	chr2	-	2929	12	ISM	ENSMUSG00000026933.18	ENST00000409386.3	5566	18	103	9767	103	-9046	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCTCTGCATGATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	25872907	25828783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25845271_25845305_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ENSMUSG00000026933.18_25829920_25855762_1	chr2	-	1309	9	ISM	ENSMUSG00000026933.18	ENSMUST00000183461.8	5090	17	17532	10182	17248	-10182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGCAGATTACCACTAA	NA	NA	NA	NA	NA	NA	NA	NA	25855762	25829919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674
ENSMUSG00000026933.18_25829970_25855793_1	chr2	-	1290	9	ISM	ENSMUSG00000026933.18	ENSMUST00000183461.8	5090	17	17501	10232	17217	-10232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTTACTTAGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	25855793	25829969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674
ENSMUSG00000026933.18_25830112_25856816_1	chr2	-	1310	10	ISM	ENSMUSG00000026933.18	ENSMUST00000183461.8	5090	17	16478	10374	16194	-10374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGAGGAGCTTGTAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	25856816	25830111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697
ENSMUSG00000026933.18_25830232_25856919_1	chr2	-	1293	10	ISM	ENSMUSG00000026933.18	ENSMUST00000183461.8	5090	17	16375	10494	16091	-10494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGCAAAGATAGCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	25856919	25830231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697
ENSMUSG00000026933.18_25830868_25872812_1	chr2	-	1268	10	ISM	ENSMUSG00000026933.18	ENSMUST00000183461.8	5090	17	482	11130	198	-11130	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGTTTCTGTTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	25872812	25830867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ENSMUSG00000026933.18_25831459_25873068_1	chr2	-	1361	9	ISM	ENSMUSG00000026933.18	ENSMUST00000183461.8	5090	17	226	11721	-58	-11721	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGTCCCATCCTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	25873068	25831458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ENSMUSG00000026933.18_25835025_25873220_1	chr2	-	1241	7	ISM	ENSMUSG00000026933.18	ENSMUST00000183461.8	5090	17	74	15287	25	-15287	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCTGGTGGTTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	25873220	25835024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ENSMUSG00000026938.11_25514678_25517936_1	chr2	-	1268	10	FSM	ENSMUSG00000026938.11	ENSMUST00000028307.9	1374	10	106	0	106	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGATCACTGTGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	25517936	25514677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_25515101_25515224_25515360_25515445_25515576_25516023_25516152_25516267_25516304_25516652_25516689_25516978_25517015_25517289_25517344_25517447_25517562_25517760
ENSMUSG00000026939.13_25511059_25511473_1	chr2	-	212	2	NNC	ENSMUSG00000026939.13	novel	271	3	NA	NA	214	12	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCTAGCAGTTTCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	25511473	25511058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_25511180_25511382
ENSMUSG00000026939.13_25511059_25511473_2	chr2	-	218	2	ISM	ENSMUSG00000026939.13	ENST00000290079.9	271	3	214	-12	214	12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCTAGCAGTTTCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	25511473	25511058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25511186_25511382
ENSMUSG00000026939.13_25511059_25511660_1	chr2	-	252	3	ISM	ENSMUSG00000026939.13	ENSMUST00000142087.2	795	5	357	980	27	12	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCTAGCAGTTTCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	25511660	25511058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25511186_25511386_25511471_25511619
ENSMUSG00000026941.17_25453555_25455747_1	chr2	-	1057	9	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	4511	12	4511	-12	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAATGCGGTAGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	25455747	25453554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25453720_25454177_25454287_25454363_25454492_25454587_25454723_25454836_25454984_25455107_25455199_25455291_25455411_25455495_25455634_25455722
ENSMUSG00000026941.17_25453648_25455796_1	chr2	-	1013	9	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	4462	105	4462	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGGGCCTTGGGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	25455796	25453647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25453720_25454177_25454287_25454363_25454492_25454587_25454723_25454836_25454984_25455107_25455199_25455291_25455411_25455495_25455634_25455722
ENSMUSG00000026941.17_25453679_25455872_1	chr2	-	1058	9	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	4386	136	4386	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCCTCCTCTTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	25455872	25453678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25453720_25454177_25454287_25454363_25454492_25454587_25454723_25454836_25454984_25455107_25455199_25455291_25455411_25455495_25455634_25455722
ENSMUSG00000026941.17_25454365_25456063_1	chr2	-	1009	8	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	4195	822	4195	-822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGGTCCCAGGTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	25456063	25454364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25454492_25454587_25454723_25454836_25454984_25455107_25455199_25455291_25455411_25455495_25455634_25455722_25455943_25456031
ENSMUSG00000026941.17_25454415_25456126_1	chr2	-	1022	8	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	4132	872	4132	-872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGTGGCTACAAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	25456126	25454414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25454492_25454587_25454723_25454836_25454984_25455107_25455199_25455291_25455411_25455495_25455634_25455722_25455943_25456031
ENSMUSG00000026941.17_25454588_25456392_1	chr2	-	1122	8	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	3866	1045	3866	-1045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGGCTGGGCCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	25456392	25454587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25454723_25454836_25454984_25455107_25455199_25455291_25455411_25455495_25455634_25455722_25455943_25456031_25456169_25456257
ENSMUSG00000026941.17_25454836_25456487_1	chr2	-	1012	8	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	3771	1293	3771	-1293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATTGGCTGGAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	25456487	25454835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25454984_25455107_25455199_25455291_25455411_25455495_25455634_25455722_25455943_25456031_25456169_25456257_25456393_25456463
ENSMUSG00000026941.17_25454880_25456548_1	chr2	-	1029	8	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	3710	1337	3710	-1337	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCCCAGCCTTCAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	25456548	25454879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25454984_25455107_25455199_25455291_25455411_25455495_25455634_25455722_25455943_25456031_25456169_25456257_25456393_25456463
ENSMUSG00000026941.17_25454967_25457186_1	chr2	-	1022	9	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	3072	1424	3072	-1424	internal_fragment	TRUE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCCTGTGTGGGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	25457186	25454966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25454984_25455107_25455199_25455291_25455411_25455495_25455634_25455722_25455943_25456031_25456169_25456257_25456393_25456463_25456581_25457138
ENSMUSG00000026941.17_25455181_25457381_1	chr2	-	1033	9	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	2877	1638	2877	-1638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGGTGTAGAATATTC	NA	NA	NA	NA	NA	NA	NA	NA	25457381	25455180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25455199_25455291_25455411_25455495_25455634_25455722_25455943_25456031_25456169_25456257_25456393_25456463_25456581_25457138_25457271_25457364
ENSMUSG00000026941.17_25455345_25457438_1	chr2	-	1019	8	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	2820	1802	2820	-1802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGCCTGGCGCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	25457438	25455344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25455411_25455495_25455634_25455722_25455943_25456031_25456169_25456257_25456393_25456463_25456581_25457138_25457271_25457364
ENSMUSG00000026941.17_25455514_25457625_1	chr2	-	1018	8	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	2633	1971	2633	-1971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCGTCCCCAATCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	25457625	25455513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25455634_25455722_25455943_25456031_25456169_25456257_25456393_25456463_25456581_25457138_25457271_25457364_25457494_25457597
ENSMUSG00000026941.17_25455552_25457693_1	chr2	-	1048	8	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	2565	2009	2565	-2009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCCAGCCTGCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	25457693	25455551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25455634_25455722_25455943_25456031_25456169_25456257_25456393_25456463_25456581_25457138_25457271_25457364_25457494_25457597
ENSMUSG00000026941.17_25455614_25457739_1	chr2	-	1032	8	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	2519	2071	2519	-2071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCCCAAATGTACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	25457739	25455613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25455634_25455722_25455943_25456031_25456169_25456257_25456393_25456463_25456581_25457138_25457271_25457364_25457494_25457597
ENSMUSG00000026941.17_25455890_25458253_1	chr2	-	1034	9	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	2005	2347	2005	-2347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCTGTGCGGCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	25458253	25455889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25455943_25456031_25456169_25456257_25456393_25456463_25456581_25457138_25457271_25457364_25457494_25457597_25457787_25457870_25457956_25458196
ENSMUSG00000026941.17_25455932_25458325_1	chr2	-	1064	9	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	1933	2389	1933	-2389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTCCGGAATGGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	25458325	25455931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25455943_25456031_25456169_25456257_25456393_25456463_25456581_25457138_25457271_25457364_25457494_25457597_25457787_25457870_25457956_25458196
ENSMUSG00000026941.17_25456144_25458517_1	chr2	-	1034	9	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	1741	2601	1741	-2601	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCGGGAGGAAGACATAC	NA	NA	NA	NA	NA	NA	NA	NA	25458517	25456143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25456169_25456257_25456393_25456463_25456581_25457138_25457271_25457364_25457494_25457597_25457787_25457870_25457956_25458196_25458371_25458469
ENSMUSG00000026941.17_25456341_25458701_1	chr2	-	1027	9	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	1557	2798	1557	-2798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGCTCACAAGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	25458701	25456340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25456393_25456463_25456581_25457138_25457271_25457364_25457494_25457597_25457787_25457870_25457956_25458196_25458371_25458469_25458559_25458641
ENSMUSG00000026941.17_25456376_25458769_1	chr2	-	1060	9	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	1489	2833	1489	-2833	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCACGGACCCACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	25458769	25456375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25456393_25456463_25456581_25457138_25457271_25457364_25457494_25457597_25457787_25457870_25457956_25458196_25458371_25458469_25458559_25458641
ENSMUSG00000026941.17_25456550_25459024_1	chr2	-	1021	9	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	1234	3007	1234	-3007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGGCATACAGGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	25459024	25456549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25456581_25457138_25457271_25457364_25457494_25457597_25457787_25457870_25457956_25458196_25458371_25458469_25458559_25458641_25458780_25458970
ENSMUSG00000026941.17_25457229_25459298_1	chr2	-	1030	9	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	960	3686	960	-3686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCCCGGGCTCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	25459298	25457228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25457271_25457364_25457494_25457597_25457787_25457870_25457956_25458196_25458371_25458469_25458559_25458641_25458780_25458970_25459097_25459240
ENSMUSG00000026941.17_25457364_25459497_1	chr2	-	1116	9	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	761	3821	761	-3821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCCGCACGTCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	25459497	25457363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25457494_25457597_25457787_25457870_25457956_25458196_25458371_25458469_25458559_25458641_25458780_25458970_25459097_25459240_25459326_25459397
ENSMUSG00000026941.17_25457683_25459789_1	chr2	-	1016	9	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	469	4140	469	-4140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTGACCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	25459789	25457682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25457787_25457870_25457956_25458196_25458371_25458469_25458559_25458641_25458780_25458970_25459097_25459240_25459326_25459397_25459529_25459705
ENSMUSG00000026941.17_25457909_25460035_1	chr2	-	1033	9	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	223	4366	223	-4366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCTTATCATGTCTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	25460035	25457908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25457956_25458196_25458371_25458469_25458559_25458641_25458780_25458970_25459097_25459240_25459326_25459397_25459529_25459705_25459832_25459918
ENSMUSG00000026941.17_25458278_25460266_1	chr2	-	1060	9	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	-8	4735	-8	-4735	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCGAAGCCGCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	25460266	25458277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25458371_25458469_25458559_25458641_25458780_25458970_25459097_25459240_25459326_25459397_25459529_25459705_25459832_25459918_25460093_25460168
ENSMUSG00000026942.14_25408622_25410395_1	chr2	-	1075	2	ISM	ENSMUSG00000026942.14	ENSMUST00000114234.2	2151	11	26527	-256	26527	256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTGATGGAGGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	25410395	25408621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25409641_25410339
ENSMUSG00000026942.14_25408681_25410441_1	chr2	-	1062	2	ISM	ENSMUSG00000026942.14	ENSMUST00000114234.2	2151	11	26481	-197	26481	197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTGCCTGGTTTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	25410441	25408680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25409641_25410339
ENSMUSG00000026942.14_25408745_25410489_1	chr2	-	1046	2	ISM	ENSMUSG00000026942.14	ENSMUST00000114234.2	2151	11	26433	-133	26433	133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGCCTGGGTAGAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	25410489	25408744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25409641_25410339
ENSMUSG00000026955.14_25262372_25266535_1	chr2	+	1290	6	FSM	ENSMUSG00000026955.14	ENSMUST00000114293.9	1600	6	30	280	26	-280	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCATGACACTGCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	25262371	25266535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_25263011_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
ENSMUSG00000026955.14_25262611_25266789_1	chr2	+	1305	6	FSM	ENSMUSG00000026955.14	ENSMUST00000114293.9	1600	6	269	26	265	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTTAGTAAAAAGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	25262610	25266789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_25263011_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
ENSMUSG00000026955.14_25262702_25266790_1	chr2	+	1215	6	FSM	ENSMUSG00000026955.14	ENSMUST00000114293.9	1600	6	360	25	356	-25	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTAGTAAAAAGTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	25262701	25266790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_25263011_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
ENSMUSG00000026956.16_25251166_25252137_1	chr2	-	641	2	ISM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	3557	1265	3557	-1265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAGAACTCCGATTGGC	NA	NA	NA	NA	NA	NA	NA	NA	25252137	25251165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25251752_25252082
ENSMUSG00000026956.16_25251312_25252803_1	chr2	-	636	3	ISM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	2891	1411	2891	-1411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACCGTGAGCTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	25252803	25251311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25251752_25252082_25252150_25252674
ENSMUSG00000026956.16_25251502_25253892_1	chr2	-	719	5	ISM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	1802	1601	1802	-1601	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATTGTCTGTCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	25253892	25251501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255_25253397_25253817
ENSMUSG00000026956.16_25251639_25253943_1	chr2	-	633	5	ISM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	1751	1738	1751	-1738	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCCATGGGGTTCTATAG	NA	NA	NA	NA	NA	NA	NA	NA	25253943	25251638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255_25253397_25253817
ENSMUSG00000026956.16_25251695_25253989_1	chr2	-	623	5	ISM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	1705	1794	1705	-1794	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAAGCCAGGCTGCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	25253989	25251694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255_25253397_25253817
ENSMUSG00000026956.16_25251723_25254181_1	chr2	-	686	6	ISM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	1513	1822	1513	-1822	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGTCTCCATTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	25254181	25251722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255_25253397_25253817_25254012_25254112
ENSMUSG00000026956.16_25252742_25254545_1	chr2	-	649	5	ISM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	1149	2841	1149	-2841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTCTGCAGGCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	25254545	25252741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25252861_25253255_25253397_25253817_25254012_25254112_25254286_25254523
ENSMUSG00000026956.16_25252801_25254669_1	chr2	-	714	5	ISM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	1025	2900	1025	-2900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGCCGACAGGGACAACC	NA	NA	NA	NA	NA	NA	NA	NA	25254669	25252800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25252861_25253255_25253397_25253817_25254012_25254112_25254286_25254523
ENSMUSG00000026956.16_25253355_25254934_1	chr2	-	627	5	ISM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	760	3454	760	-3454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCCATACGTGGATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	25254934	25253354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892
ENSMUSG00000026956.16_25253961_25255388_1	chr2	-	655	5	ISM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	306	4060	306	-4060	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCCCCCAGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	25255388	25253960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
ENSMUSG00000026958.14_25242299_25244305_1	chr2	-	753	6	ISM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	2066	-3	2066	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAGTAGGATCCATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	25244305	25242298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244
ENSMUSG00000026958.14_25242419_25244548_1	chr2	-	702	7	ISM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	1823	117	1823	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACATCCCTTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	25244548	25242418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479
ENSMUSG00000026958.14_25242477_25244597_1	chr2	-	693	7	ISM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	1774	175	1774	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCACGGTGGCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	25244597	25242476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479
ENSMUSG00000026958.14_25242530_25244646_1	chr2	-	689	7	ISM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	1725	228	1725	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTACCCTCATTCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	25244646	25242529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479
ENSMUSG00000026958.14_25243166_25244964_1	chr2	-	710	7	ISM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	1407	864	1407	-864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGTCCAGGCCTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	25244964	25243165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904
ENSMUSG00000026958.14_25243372_25245582_1	chr2	-	735	7	ISM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	789	1070	789	-1070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAAGGCCTGGGCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	25245582	25243371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569
ENSMUSG00000026958.14_25243692_25245858_1	chr2	-	690	7	ISM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	513	1390	513	-1390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTATACCAAAGCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	25245858	25243691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825
ENSMUSG00000026958.14_25244753_25246309_1	chr2	-	703	6	ISM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	62	2451	62	-2451	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGACTCTTTCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	25246309	25244752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
ENSMUSG00000026960.7_53082291_53092982_1	chr2	+	350	3	ISM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	191	16250	191	-16250	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTTGGACAGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	53082290	53092982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_53082535_53084295_53084350_53092930
ENSMUSG00000026960.7_53082472_53107400_1	chr2	+	344	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	372	1832	372	-1832	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTACACTAGAGCAACGTT	NA	NA	NA	NA	NA	NA	NA	NA	53082471	53107400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ENSMUSG00000026965.13_25162490_25166447_1	chr2	+	1251	5	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	0	9480	0	-9480	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGTGTGGCCACTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	25162489	25166447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327
ENSMUSG00000026965.13_25162607_25167765_1	chr2	+	1252	6	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	117	8162	117	-8162	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCCACTGGCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	25162606	25167765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647
ENSMUSG00000026965.13_25162983_25168423_1	chr2	+	1201	6	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	493	7504	493	-7504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACCCTGCCTGCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	25162982	25168423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335
ENSMUSG00000026965.13_25163154_25169220_1	chr2	+	1161	7	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	664	6707	664	-6707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGCTGGTCAGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	25163153	25169220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183
ENSMUSG00000026965.13_25163304_25170179_1	chr2	+	1157	8	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	814	5748	814	-5748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCCCATGCACTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	25163303	25170179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138
ENSMUSG00000026965.13_25163376_25170220_1	chr2	+	1126	8	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	886	5707	886	-5707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGGACTGCCTCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	25163375	25170220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138
ENSMUSG00000026965.13_25163490_25170498_1	chr2	+	1210	9	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	1000	5429	1000	-5429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACGCCAGTAGGCCAATG	NA	NA	NA	NA	NA	NA	NA	NA	25163489	25170498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294
ENSMUSG00000026965.13_25163872_25174629_1	chr2	+	1146	9	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	1382	1298	1382	-1298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTGACCGCACCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	25163871	25174629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573
ENSMUSG00000026965.13_25164720_25174988_1	chr2	+	1145	9	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	2230	939	2230	-939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGGCACTGCTTCGAA	NA	NA	NA	NA	NA	NA	NA	NA	25164719	25174988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948
ENSMUSG00000026965.13_25164768_25175049_1	chr2	+	1158	9	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	2278	878	2278	-878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCCAGGCACTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	25164767	25175049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948
ENSMUSG00000026965.13_25164809_25175114_1	chr2	+	1182	9	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	2319	813	2319	-813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGACAGTGATGATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	25164808	25175114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948
ENSMUSG00000026965.13_25166410_25175290_1	chr2	+	1154	9	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	3920	637	3920	-637	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCAACCTAGAGAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	25166409	25175290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ENSMUSG00000026965.13_25167737_25175410_1	chr2	+	1147	8	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	5247	517	5247	-517	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCCGAGACCAGCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	25167736	25175410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ENSMUSG00000026965.13_25168432_25175543_1	chr2	+	1155	7	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	5942	384	5942	-384	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTCCTGTGCCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	25168431	25175543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ENSMUSG00000026965.13_25169212_25175686_1	chr2	+	1184	6	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	6722	241	6722	-241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACAGGGCCTGGATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	25169211	25175686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ENSMUSG00000026965.13_25169272_25175727_1	chr2	+	1165	6	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	6782	200	6782	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGAAGCCAGGCTTACCC	NA	NA	NA	NA	NA	NA	NA	NA	25169271	25175727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ENSMUSG00000026965.13_25170293_25175928_1	chr2	+	1238	4	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	7803	-1	7803	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGGCATCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	25170292	25175928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25170499_25174573_25174704_25174948_25175185_25175262
ENSMUSG00000026966.7_25161371_25162054_1	chr2	-	337	2	ISM	ENSMUSG00000026966.7	ENSMUST00000028342.7	862	3	374	320	374	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGACCTCCACCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	25162054	25161370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25161594_25161940
ENSMUSG00000026966.7_25161560_25162416_1	chr2	-	341	3	FSM	ENSMUSG00000026966.7	ENSMUST00000028342.7	862	3	12	509	12	-509	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAGAGAAGCTGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	25162416	25161559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_25161594_25161940_25162141_25162309
ENSMUSG00000026970.17_60582479_60592449_1	chr2	-	1229	6	ISM	ENSMUSG00000026970.17	ENSMUST00000028347.13	4436	14	201087	1942	119333	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGTGAAACACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	60592449	60582478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396
ENSMUSG00000026970.17_60582580_60593618_1	chr2	-	1258	8	ISM	ENSMUSG00000026970.17	ENSMUST00000028347.13	4436	14	199918	2043	118164	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTTGCTGAAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	60593618	60582579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579
ENSMUSG00000026970.17_60582643_60593656_1	chr2	-	1233	8	ISM	ENSMUSG00000026970.17	ENSMUST00000028347.13	4436	14	199880	2106	118126	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAATGGGCTGGTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	60593656	60582642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579
ENSMUSG00000026970.17_60582693_60586871_1	chr2	-	892	4	ISM	ENSMUSG00000026970.17	ENSMUST00000164147.8	2543	15	124911	396	124911	373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTGTTTCAGTAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	60586871	60582692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779
ENSMUSG00000026970.17_60582716_60593686_1	chr2	-	1190	8	ISM	ENSMUSG00000026970.17	ENSMUST00000028347.13	4436	14	199850	2179	118096	350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCCTTAACTCTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	60593686	60582715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579
ENSMUSG00000026970.17_60582854_60590150_1	chr2	-	849	6	ISM	ENSMUSG00000026970.17	ENSMUST00000112509.2	1806	15	121664	-212	121632	212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCCGACTTCACCCATG	NA	NA	NA	NA	NA	NA	NA	NA	60590150	60582853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102
ENSMUSG00000026970.17_60583066_60672701_1	chr2	-	1338	14	ISM	ENSMUSG00000026970.17	ENSMUST00000112509.2	1806	15	39113	0	39081	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGGAAAAAAAATCAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	60672701	60583065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640
ENSMUSG00000026970.17_60583066_60672816_1	chr2	-	1453	14	ISM	ENSMUSG00000026970.17	ENSMUST00000112509.2	1806	15	38998	0	38966	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGGAAAAAAAATCAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	60672816	60583065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640
ENSMUSG00000026970.17_60583168_60711610_1	chr2	-	1494	15	NNC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	172	-102	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATAAGGTGCATAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	60711610	60583167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612357_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ENSMUSG00000026970.17_60583168_60711610_3	chr2	-	1500	15	FSM	ENSMUSG00000026970.17	ENSMUST00000112509.2	1806	15	204	102	172	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATAAGGTGCATAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	60711610	60583167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ENSMUSG00000026970.17_60584074_60711782_1	chr2	-	1513	14	ISM	ENSMUSG00000026970.17	ENSMUST00000112509.2	1806	15	32	1008	0	-1008	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAGGGCAAAGTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	60711782	60584073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ENSMUSG00000026970.17_60585760_60793234_1	chr2	-	1259	12	ISM	ENSMUSG00000026970.17	ENSMUST00000028347.13	4436	14	302	5223	302	-2694	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGTATAGAGATTCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	60793234	60585759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60793034
ENSMUSG00000026970.17_60592395_60793536_1	chr2	-	1320	9	ISM	ENSMUSG00000026970.17	ENSMUST00000028347.13	4436	14	0	11858	0	-9329	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACCTCAGGACTCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	60793536	60592394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60793034
ENSMUSG00000026971.16_60435483_60458813_1	chr2	-	841	4	ISM	ENSMUSG00000026971.16	ENST00000409967.6	2156	12	45201	0	45194	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGGACTCAGGAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	60458813	60435482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60435651_60441710_60441831_60458091_60458510_60458678
ENSMUSG00000026971.16_60435601_60464945_1	chr2	-	745	5	ISM	ENSMUSG00000026971.16	ENST00000409967.6	2156	12	39069	118	39062	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATCCTGCTCATCGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	60464945	60435600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60435651_60441710_60441831_60458091_60458510_60458678_60458814_60464923
ENSMUSG00000026971.16_60450751_60458217_1	chr2	-	153	2	ISM	ENSMUSG00000026971.16	ENST00000428609.6	2387	13	45790	15268	45790	-15268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGCCGGGATGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	60458217	60450750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60450778_60458091
ENSMUSG00000026971.16_60458092_60483589_1	chr2	-	843	5	ISM	ENSMUSG00000026971.16	ENST00000428609.6	2387	13	20418	22609	20418	-22609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGATGGGCTCCTACG	NA	NA	NA	NA	NA	NA	NA	NA	60483589	60458091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60458510_60458678_60458814_60464923_60465014_60480317_60480414_60483485
ENSMUSG00000026971.16_60458306_60485069_1	chr2	-	774	6	ISM	ENSMUSG00000026971.16	ENST00000428609.6	2387	13	18938	22823	18938	-22823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGCCACATGGGTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	60485069	60458305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60458510_60458678_60458814_60464923_60465014_60480317_60480414_60483485_60483648_60484982
ENSMUSG00000026971.16_60458445_60498709_1	chr2	-	792	7	ISM	ENSMUSG00000026971.16	ENST00000428609.6	2387	13	5298	22962	5298	-22962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGGGGCTGGGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	60498709	60458444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60458510_60458678_60458814_60464923_60465014_60480317_60480414_60483485_60483648_60484982_60485149_60498631
ENSMUSG00000026971.16_60458489_60458807_1	chr2	-	150	2	ISM	ENSMUSG00000026971.16	ENST00000428609.6	2387	13	45200	23006	45200	-23006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGTATCCAACTGTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	60458807	60458488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60458510_60458678
ENSMUSG00000026971.16_60485034_60503852_1	chr2	-	754	5	ISM	ENSMUSG00000026971.16	ENST00000409967.6	2156	12	162	49551	155	-49551	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACACCTGAAGGTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	60503852	60485033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60485149_60498631_60498879_60499445_60499651_60502975_60503056_60503745
ENSMUSG00000026971.16_60485083_60503909_1	chr2	-	762	5	ISM	ENSMUSG00000026971.16	ENST00000409967.6	2156	12	105	49600	98	-49600	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAGAGATTCAATGAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	60503909	60485082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60485149_60498631_60498879_60499445_60499651_60502975_60503056_60503745
ENSMUSG00000026971.16_60498632_60504037_1	chr2	-	824	4	ISM	ENSMUSG00000026971.16	ENST00000409967.6	2156	12	-23	63149	18	-63149	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAGTGAACTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	60504037	60498631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60498879_60499445_60499651_60502975_60503056_60503745
ENSMUSG00000026971.16_60499592_60503826_1	chr2	-	140	2	ISM	ENSMUSG00000026971.16	ENST00000428609.6	2387	13	181	64109	181	-64109	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGATGTCAACTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	60503826	60499591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_60499651_60503745
ENSMUSG00000026975.11_24853467_24856541_1	chr2	+	212	3	ISM	ENSMUSG00000026975.11	ENSMUST00000028351.9	1666	9	1055	5634	1055	-5634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTGATTCTAAGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	24853466	24856541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_24853556_24855571_24855667_24856513
ENSMUSG00000026976.16_24311250_24334744_1	chr2	-	1641	10	ISM	ENSMUSG00000026976.16	ENST00000681162.1	1683	11	30385	-2	30385	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTTCACGAAGAACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	24334744	24311249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_24311618_24312980_24313068_24319538_24319641_24325774_24325982_24326459_24326581_24330651_24330828_24331089_24331216_24331603_24331693_24332951_24333150_24334577
ENSMUSG00000026976.16_24311406_24365109_1	chr2	-	1509	11	FSM	ENSMUSG00000026976.16	ENST00000681162.1	1683	11	20	154	20	137	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCATGAAAGTCAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	24365109	24311405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_24311618_24312980_24313068_24319538_24319641_24325774_24325982_24326459_24326581_24330651_24330828_24331089_24331216_24331603_24331693_24332951_24333150_24334577_24334744_24365084
ENSMUSG00000026977.18_60065240_60078391_1	chr2	+	706	6	ISM	ENSMUSG00000026977.18	ENSMUST00000067542.15	2244	10	10127	-90	10127	74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTGACTATACATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	60065239	60078391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ENSMUSG00000026977.18_60067232_60078595_1	chr2	+	674	5	ISM	ENSMUSG00000026977.18	ENSMUST00000067542.15	2244	10	12119	-294	12119	278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATCAACTTTCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	60067231	60078595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ENSMUSG00000026977.18_60071343_60078703_1	chr2	+	687	4	ISM	ENSMUSG00000026977.18	ENSMUST00000067542.15	2244	10	16230	-402	16230	386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAATAAAATGCCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	60071342	60078703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_60071397_60073900_60074015_60075555_60075605_60078233
ENSMUSG00000026981.16_24238559_24241187_1	chr2	+	1843	2	ISM	ENSMUSG00000026981.16	ENSMUST00000114482.3	1986	4	3237	-239	3237	239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCAGATCTGCACTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	24238558	24241187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_24238641_24239426
ENSMUSG00000026987.17_59792568_59799043_1	chr2	-	480	2	ISM	ENSMUSG00000026987.17	ENST00000343439.9	2355	14	15131	26995	15131	-26995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGACGCAACCCCGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	59799043	59792567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_59792975_59798970
ENSMUSG00000026987.17_59792653_59799133_1	chr2	-	485	2	ISM	ENSMUSG00000026987.17	ENST00000343439.9	2355	14	15041	27080	15041	-27080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGAGAGCCCCTGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	59799133	59792652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_59792975_59798970
ENSMUSG00000026987.17_59799012_59799667_1	chr2	-	461	2	ISM	ENSMUSG00000026987.17	ENST00000343439.9	2355	14	14507	33439	14507	-33439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTCTAGTTCTTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	59799667	59799011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_59799367_59799561
ENSMUSG00000026987.17_59799560_59808952_1	chr2	-	463	3	ISM	ENSMUSG00000026987.17	ENST00000343439.9	2355	14	5222	33987	5222	-33987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCGCTCGCATGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	59808952	59799559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_59799763_59807702_59807897_59808886
ENSMUSG00000026987.17_59799626_59809022_1	chr2	-	467	3	ISM	ENSMUSG00000026987.17	ENST00000343439.9	2355	14	5152	34053	5152	-34053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAGAGTGAAGATGACG	NA	NA	NA	NA	NA	NA	NA	NA	59809022	59799625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_59799763_59807702_59807897_59808886
ENSMUSG00000026988.16_59688954_59708875_1	chr2	-	1261	7	NIC	ENSMUSG00000026988.16	novel	1264	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	3618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGTGCGCGCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	59708875	59688953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_59689095_59691904_59692082_59692963_59693110_59703533_59703654_59704582_59704673_59707010_59707196_59708473
ENSMUSG00000026988.16_59688954_59708875_2	chr2	-	1255	7	NNC	ENSMUSG00000026988.16	novel	1264	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGTGCGCGCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	59708875	59688953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_59689095_59691904_59692082_59692963_59693110_59703533_59703654_59704582_59704667_59707010_59707196_59708473
ENSMUSG00000026988.16_59691905_59708875_1	chr2	-	1117	6	NNC	ENSMUSG00000026988.16	novel	1264	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGATAGTGGAGCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	59708875	59691904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_59692085_59692963_59693110_59703533_59703654_59704582_59704667_59707010_59707196_59708473
ENSMUSG00000026988.16_59691905_59708875_2	chr2	-	1123	6	FSM	ENSMUSG00000026988.16	ENST00000409124.1	1121	6	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGATAGTGGAGCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	59708875	59691904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_59692085_59692963_59693110_59703533_59703654_59704582_59704673_59707010_59707196_59708473
ENSMUSG00000026991.21_59142045_59184801_1	chr2	+	2102	13	NNC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCCTGCTGAGGGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	59142044	59184801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178381_59182605_59182680_59184546
ENSMUSG00000026991.21_59142045_59184801_2	chr2	+	2106	13	NNC	ENSMUSG00000026991.21	novel	2112	13	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2235	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCCTGCTGAGGGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	59142044	59184801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169067_59169255_59169424_59169599_59172436_59172588_59175141_59175342_59178063_59178149_59178267_59178386_59182605_59182680_59184546
ENSMUSG00000026991.21_59142045_59184801_3	chr2	+	2107	13	ISM	ENSMUSG00000026991.21	ENSMUST00000168631.8	4484	21	150851	747	5	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3752	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCCTGCTGAGGGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	59142044	59184801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
ENSMUSG00000026991.21_59142045_59184801_4	chr2	+	2101	13	NNC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCCTGCTGAGGGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	59142044	59184801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184552
ENSMUSG00000026999.15_80469176_80489250_1	chr2	+	1541	9	NNC	ENSMUSG00000026999.15	novel	1559	9	NA	NA	16	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTTGGAAGGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	80469175	80489250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483334_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ENSMUSG00000026999.15_80469176_80489250_2	chr2	+	1542	9	NNC	ENSMUSG00000026999.15	novel	1559	9	NA	NA	16	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTTGGAAGGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	80469175	80489250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_80469272_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ENSMUSG00000026999.15_80469176_80489250_3	chr2	+	1540	9	NNC	ENSMUSG00000026999.15	novel	1559	9	NA	NA	16	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTTGGAAGGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	80469175	80489250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476801_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ENSMUSG00000027001.11_80447722_80461330_1	chr2	+	471	3	FSM	ENSMUSG00000027001.11	ENST00000342619.10	474	3	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGTGACAAAGTGCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	80447721	80461330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_80447951_80451537_80451585_80461135
ENSMUSG00000027006.14_80145810_80165916_1	chr2	+	1798	13	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	0	18471	0	-13816	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGGTTACTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	80145809	80165916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796
ENSMUSG00000027006.14_80146013_80171187_1	chr2	+	1750	15	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	203	13200	203	-8545	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTACGGAAAGCATCAACAC	NA	NA	NA	NA	NA	NA	NA	NA	80146012	80171187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155
ENSMUSG00000027006.14_80146089_80171206_1	chr2	+	1693	15	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	279	13181	279	-8526	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTCTACGGTCAACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	80146088	80171206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155
ENSMUSG00000027006.14_80147591_80165916_1	chr2	+	1322	11	ISM	ENSMUSG00000027006.14	ENST00000616986.5	2247	19	-29	13816	-29	-13816	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGGTTACTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	80147590	80165916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80163272_80163363_80164069_80164184_80165796
ENSMUSG00000027006.14_80147591_80174362_1	chr2	+	1802	15	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	1781	10025	-29	-5370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	866	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAAATCCTAGGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	80147590	80174362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260
ENSMUSG00000027006.14_80147760_80175330_1	chr2	+	1696	16	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	1950	9057	140	-4402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCATGATGAAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	80147759	80175330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267
ENSMUSG00000027006.14_80147809_80171187_1	chr2	+	1259	13	ISM	ENSMUSG00000027006.14	ENST00000616986.5	2247	19	189	8545	189	-8545	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTACGGAAAGCATCAACAC	NA	NA	NA	NA	NA	NA	NA	NA	80147808	80171187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155
ENSMUSG00000027006.14_80147870_80176902_1	chr2	+	1726	17	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	2060	7485	250	-2830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCTTTTTGTACTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	80147869	80176902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855
ENSMUSG00000027006.14_80147881_80171226_1	chr2	+	1226	13	ISM	ENSMUSG00000027006.14	ENST00000616986.5	2247	19	261	8506	261	-8506	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGTACCTTAGACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	80147880	80171226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155
ENSMUSG00000027006.14_80149503_80174363_1	chr2	+	1313	13	ISM	ENSMUSG00000027006.14	ENST00000616986.5	2247	19	1883	5369	1883	-5369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAATCCTAGGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	80149502	80174363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260
ENSMUSG00000027006.14_80149605_80178012_1	chr2	+	1713	18	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	3795	6375	1985	-1720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTAACACCTCAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	80149604	80178012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991
ENSMUSG00000027006.14_80149606_80175332_1	chr2	+	1274	14	ISM	ENSMUSG00000027006.14	ENST00000616986.5	2247	19	1986	4400	1986	-4400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATGATGAAGTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80149605	80175332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267
ENSMUSG00000027006.14_80151587_80178139_1	chr2	+	1779	17	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	5777	6248	3967	-1593	internal_fragment	FALSE	canonical	NA	NA	NA	NA	905	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTATTGTTGTCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	80151586	80178139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991
ENSMUSG00000027006.14_80155003_80176918_1	chr2	+	1317	13	ISM	ENSMUSG00000027006.14	ENST00000616986.5	2247	19	7383	2814	7383	-2814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAAATGTTCAAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	80155002	80176918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855
ENSMUSG00000027006.14_80155339_80176918_1	chr2	+	1233	12	ISM	ENSMUSG00000027006.14	ENST00000616986.5	2247	19	7719	2814	7719	-2814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAAATGTTCAAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	80155338	80176918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855
ENSMUSG00000027006.14_80155395_80176989_1	chr2	+	1248	12	ISM	ENSMUSG00000027006.14	ENST00000616986.5	2247	19	7775	2743	7775	-2743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATTCCATCATAATC	NA	NA	NA	NA	NA	NA	NA	NA	80155394	80176989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855
ENSMUSG00000027006.14_80155395_80177741_1	chr2	+	1302	13	ISM	ENSMUSG00000027006.14	ENST00000616986.5	2247	19	7775	1991	7775	-1991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGATTCAAGTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	80155394	80177741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687
ENSMUSG00000027006.14_80155395_80179732_1	chr2	+	1708	16	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	9585	4655	7775	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGCAGGCTCTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	80155394	80179732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612
ENSMUSG00000027006.14_80155992_80178058_1	chr2	+	1263	13	ISM	ENSMUSG00000027006.14	ENST00000616986.5	2247	19	8372	1674	8372	-1674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTGGGTGGTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	80155991	80178058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80156056_80157001_80157080_80158415_80158460_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991
ENSMUSG00000027006.14_80156013_80170837_1	chr2	+	583	8	ISM	ENSMUSG00000027006.14	ENST00000680258.1	2325	20	8393	8895	8393	-8895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGCTTTTGCCAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	80156012	80170837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165856_80165912_80170816
ENSMUSG00000027006.14_80157000_80170944_1	chr2	+	649	7	ISM	ENSMUSG00000027006.14	ENST00000680258.1	2325	20	9380	8788	9380	-8788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTCTTTTTATCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	80156999	80170944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165856_80165912_80170816
ENSMUSG00000027006.14_80157013_80183261_1	chr2	+	1691	16	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	11203	1126	9393	-1126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGATCCCTTTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	80157012	80183261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ENSMUSG00000027006.14_80158414_80179732_1	chr2	+	1324	12	ISM	ENSMUSG00000027006.14	ENST00000616986.5	2247	19	10794	0	10794	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGCAGGCTCTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	80158413	80179732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80158460_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612
ENSMUSG00000027006.14_80161637_80183423_1	chr2	+	1718	14	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	15827	964	14017	-964	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTGTGTTGTGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	80161636	80183423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ENSMUSG00000027006.14_80161637_80183472_1	chr2	+	1767	14	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	15827	915	14017	-915	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCAGTCTTAGCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	80161636	80183472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ENSMUSG00000027006.14_80163292_80175290_1	chr2	+	610	7	ISM	ENSMUSG00000027006.14	ENST00000680258.1	2325	20	15672	4442	15672	-4442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTTACACCCAGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	80163291	80175290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80163363_80164069_80164184_80165856_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267
ENSMUSG00000027006.14_80163293_80183638_1	chr2	+	1799	13	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	17483	749	15673	-749	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGCGCTTGAAAAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	80163292	80183638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ENSMUSG00000027006.14_80165891_80183822_1	chr2	+	1705	11	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	20081	565	18271	-565	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTAAGTGTAAAAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	80165890	80183822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ENSMUSG00000027006.14_80170842_80183863_1	chr2	+	1695	10	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	23222	-524	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGTAAGAAGAAGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	80170841	80183863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180977_80181078_80183202
ENSMUSG00000027006.14_80171226_80184074_1	chr2	+	1738	9	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	25416	313	23606	-313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCCGTGGTTTTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	80171225	80184074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ENSMUSG00000027006.14_80174345_80184180_1	chr2	+	1713	8	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	28535	207	26725	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCAGTAAAGTTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	80174344	80184180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ENSMUSG00000027006.14_80176855_80184391_1	chr2	+	1751	6	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	31045	-4	29235	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGAAGATGATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	80176854	80184391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ENSMUSG00000027010.17_71103967_71107022_1	chr2	-	1860	3	ISM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	91071	2560	91071	-2560	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGTGTGTCTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	71107022	71103966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_71105698_71106775_71106867_71106984
ENSMUSG00000027010.17_71104136_71109921_1	chr2	-	1874	4	ISM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	88172	2729	88172	-2729	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTATCTGCAACTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	71109921	71104135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859
ENSMUSG00000027010.17_71104297_71112852_1	chr2	-	1829	5	ISM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	85241	2890	85241	-2890	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCAACATCAGGACTTAC	NA	NA	NA	NA	NA	NA	NA	NA	71112852	71104296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813
ENSMUSG00000027010.17_71104453_71123750_1	chr2	-	1822	6	ISM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	74343	3046	74343	-3046	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGGAGTTCAGATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	71123750	71104452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703
ENSMUSG00000027010.17_71105211_71145435_1	chr2	-	1819	13	ISM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	52658	3804	52658	-3804	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCTCATCCCAACAAATC	NA	NA	NA	NA	NA	NA	NA	NA	71145435	71105210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326
ENSMUSG00000027010.17_71105421_71164030_1	chr2	-	1869	15	ISM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	34063	4014	34063	-4014	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCACTTTCTATACGA	NA	NA	NA	NA	NA	NA	NA	NA	71164030	71105420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948
ENSMUSG00000027010.17_71105533_71174376_1	chr2	-	1934	16	ISM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	23717	4126	23717	-4126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCAGCCCAAGGCGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	71174376	71105532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71174233
ENSMUSG00000027010.17_71105610_71174376_1	chr2	-	1857	16	ISM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	23717	4203	23717	-4203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGGCCACTTTCGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	71174376	71105609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71174233
ENSMUSG00000027010.17_71107073_71198093_1	chr2	-	1881	16	ISM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	0	5666	0	-5666	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAGACAACATACAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	71198093	71107072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71174233_71174377_71196870_71196925_71197856
ENSMUSG00000027011.15_78699391_78750641_1	chr2	+	1253	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	0	996	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTATTTTGTGATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	78699390	78750641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
ENSMUSG00000027011.15_78699391_78750868_1	chr2	+	1480	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	0	769	0	-59	multi-exon	FALSE	canonical	NA	NA	NA	NA	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGCTCAGAGAGCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	78699390	78750868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
ENSMUSG00000027011.15_78699584_78750927_1	chr2	+	1346	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	193	710	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCTTGTCATAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	78699583	78750927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
ENSMUSG00000027011.15_78700022_78750396_1	chr2	+	871	6	FSM	ENSMUSG00000027011.15	ENST00000602710.5	1536	6	118	547	0	-245	multi-exon	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCACATCATTTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	78700021	78750396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_78700244_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
ENSMUSG00000027011.15_78700867_78702828_1	chr2	+	219	2	ISM	ENSMUSG00000027011.15	ENST00000602475.5	437	3	1283	-11	845	11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTCGGATTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	78700866	78702828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_78701023_78702765
ENSMUSG00000027011.15_78749051_78751491_1	chr2	+	1318	2	ISM	ENSMUSG00000027011.15	ENST00000602710.5	1536	6	49147	-548	49029	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTTAGAGGTTAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	78749050	78751491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_78749179_78750301
ENSMUSG00000027012.16_71042150_71093532_1	chr2	+	2315	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112138.8	2466	16	48	103	-28	-103	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCGCATGCCGTCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	71042149	71093532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUSG00000027012.16_71042150_71093532_2	chr2	+	2310	16	NNC	ENSMUSG00000027012.16	novel	2466	16	NA	NA	-28	-103	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCGCATGCCGTCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	71042149	71093532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080067_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUSG00000027012.16_71042150_71093532_3	chr2	+	2307	16	NNC	ENSMUSG00000027012.16	novel	2483	16	NA	NA	-28	-103	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCGCATGCCGTCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	71042149	71093532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081190_71081331_71088427_71088569_71091165_71091292_71092994
ENSMUSG00000027012.16_71042150_71093532_4	chr2	+	2310	16	NNC	ENSMUSG00000027012.16	novel	2466	16	NA	NA	-28	-103	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCGCATGCCGTCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	71042149	71093532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077037_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUSG00000027012.16_71044838_71093635_1	chr2	+	2318	15	NNC	ENSMUSG00000027012.16	novel	2466	16	NA	NA	2502	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTCTCAAATTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	71044837	71093635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081190_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUSG00000027012.16_71044838_71093635_2	chr2	+	2323	15	ISM	ENSMUSG00000027012.16	ENSMUST00000081710.12	2631	16	2660	12	2502	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTCTCAAATTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	71044837	71093635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUSG00000027012.16_71049645_71093635_1	chr2	+	2256	14	NNC	ENSMUSG00000027012.16	novel	2466	16	NA	NA	7309	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTCTCAAATTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	71049644	71093635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_71049763_71058943_71059035_71066263_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUSG00000027018.12_71219604_71271640_1	chr2	+	1250	11	FSM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	0	326	0	-326	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTACCGGCGTGTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	71219603	71271640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ENSMUSG00000027018.12_71220262_71271729_1	chr2	+	1279	10	ISM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	658	237	658	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGATGACCCTAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	71220261	71271729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ENSMUSG00000027018.12_71220270_71271716_1	chr2	+	1252	10	NNC	ENSMUSG00000027018.12	novel	1899	11	NA	NA	666	-250	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGTGCTGTGAACCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	71220269	71271716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264404_71264551_71269039_71269157_71271511
ENSMUSG00000027018.12_71239332_71271833_1	chr2	+	1296	9	NNC	ENSMUSG00000027018.12	novel	1576	11	NA	NA	19728	-133	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATAAAAGATGGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	71239331	71271833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271517
ENSMUSG00000027018.12_71239332_71271833_3	chr2	+	1302	9	ISM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	19728	133	19728	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATAAAAGATGGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	71239331	71271833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ENSMUSG00000027018.12_71240487_71271971_1	chr2	+	1364	8	ISM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	20883	-5	20883	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATTTGAGTTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	71240486	71271971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ENSMUSG00000027018.12_71250436_71271971_1	chr2	+	1326	7	ISM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	30832	-5	30832	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATTTGAGTTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	71250435	71271971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ENSMUSG00000027067.17_84867799_84870323_1	chr2	+	544	4	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	4	7127	4	-7127	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGGCAAGCTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	84867798	84870323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84867875_84868137_84868314_84868696_84868883_84870217
ENSMUSG00000027067.17_84868171_84870662_1	chr2	+	489	4	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	376	6788	376	-6788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGTCCCAGTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	84868170	84870662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84868314_84868696_84868883_84870217_84870324_84870608
ENSMUSG00000027067.17_84868283_84870799_1	chr2	+	514	4	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	488	6651	488	-6651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTTTCTTCACGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	84868282	84870799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84868314_84868696_84868883_84870217_84870324_84870608
ENSMUSG00000027067.17_84868734_84870939_1	chr2	+	483	4	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	939	6511	939	-6511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGCCACCGGAGACGCC	NA	NA	NA	NA	NA	NA	NA	NA	84868733	84870939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84868883_84870217_84870324_84870608_84870800_84870902
ENSMUSG00000027067.17_84868786_84870993_1	chr2	+	485	4	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	991	6457	991	-6457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCGGTCGATACGATATC	NA	NA	NA	NA	NA	NA	NA	NA	84868785	84870993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84868883_84870217_84870324_84870608_84870800_84870902
ENSMUSG00000027067.17_84868833_84871048_1	chr2	+	493	4	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	1038	6402	1038	-6402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTTGACTACAAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	84868832	84871048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84868883_84870217_84870324_84870608_84870800_84870902
ENSMUSG00000027067.17_84870671_84871491_1	chr2	+	504	4	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	2876	5959	2876	-5959	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTCAGGATCCCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	84870670	84871491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84870800_84870902_84871134_84871262_84871367_84871451
ENSMUSG00000027067.17_84870728_84871537_1	chr2	+	493	4	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	2933	5913	2933	-5913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGTCAACCGTAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	84870727	84871537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84870800_84870902_84871134_84871262_84871367_84871451
ENSMUSG00000027067.17_84870961_84871864_1	chr2	+	492	4	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	3166	5586	3166	-5586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCCCCCTGTGCACATC	NA	NA	NA	NA	NA	NA	NA	NA	84870960	84871864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84871134_84871262_84871367_84871451_84871581_84871778
ENSMUSG00000027067.17_84871016_84871911_1	chr2	+	484	4	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	3221	5539	3221	-5539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCCGTGGCACCACGAC	NA	NA	NA	NA	NA	NA	NA	NA	84871015	84871911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84871134_84871262_84871367_84871451_84871581_84871778
ENSMUSG00000027067.17_84871061_84871972_1	chr2	+	500	4	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	3266	5478	3266	-5478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTATACCTTCAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	84871060	84871972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84871134_84871262_84871367_84871451_84871581_84871778
ENSMUSG00000027067.17_84871335_84873084_1	chr2	+	504	5	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	3540	4366	3540	-4366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCCTATTTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	84871334	84873084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036
ENSMUSG00000027067.17_84871518_84873333_1	chr2	+	531	5	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	3723	4117	3723	-4117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCAGAGGAGTGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	84871517	84873333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299
ENSMUSG00000027067.17_84871778_84874682_1	chr2	+	501	5	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	3983	2768	3983	-2768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTCCTCCAGCAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	84871777	84874682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662
ENSMUSG00000027067.17_84871888_84875767_1	chr2	+	515	6	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	4093	1683	4093	-1683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCCAAACGCCCCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	84871887	84875767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753
ENSMUSG00000027067.17_84871924_84875839_1	chr2	+	551	6	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	4129	1611	4129	-1611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGATCATCCTGGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	84871923	84875839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753
ENSMUSG00000027067.17_84873299_84876629_1	chr2	+	470	5	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	5504	821	5504	-821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATGGAAAAAAAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	84873298	84876629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596
ENSMUSG00000027067.17_84876057_84877223_1	chr2	+	481	3	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	8262	227	8262	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGTAGGAGTGTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	84876056	84877223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84876117_84876596_84876784_84876989
ENSMUSG00000027067.17_84876637_84877341_1	chr2	+	499	2	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	8842	109	8842	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGGTCATGCCAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	84876636	84877341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84876784_84876989
ENSMUSG00000027067.17_84876684_84877450_1	chr2	+	561	2	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	8889	0	8889	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	84876683	84877450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84876784_84876989
ENSMUSG00000027070.15_69316596_69322197_1	chr2	-	654	4	ISM	ENSMUSG00000027070.15	ENST00000649046.1	15320	79	94097	61915	94097	19952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCAACGGGTCTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	69322197	69316595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_69316697_69318166_69318407_69319478_69319693_69322098
ENSMUSG00000027076.11_84657341_84660457_1	chr2	+	590	3	FSM	ENSMUSG00000027076.11	ENSMUST00000028470.10	690	3	0	100	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTAGAGCTCTCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	84657340	84660457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_84657492_84657942_84658058_84660133
ENSMUSG00000027078.15_84629172_84640520_1	chr2	+	1551	4	NNC	ENSMUSG00000027078.15	novel	1560	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCAGAAGTCGGACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	84629171	84640520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_84629268_84633122_84633219_84636680_84636868_84639348
ENSMUSG00000027078.15_84629172_84640520_2	chr2	+	1552	4	NNC	ENSMUSG00000027078.15	novel	1560	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCAGAAGTCGGACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	84629171	84640520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_84629277_84633122_84633219_84636680_84636868_84639356
ENSMUSG00000027079.16_84553466_84557694_1	chr2	-	1906	3	NNC	ENSMUSG00000027079.16	novel	1912	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTATGATTCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	84557694	84553465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_84554562_84555872_84556501_84557512
ENSMUSG00000027079.16_84553827_84556187_1	chr2	-	858	2	FSM	ENSMUSG00000027079.16	ENST00000302731.4	1132	2	276	-2	276	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACTATAGCAATCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	84556187	84553826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_84554562_84556064
ENSMUSG00000027079.16_84554001_84556449_1	chr2	-	944	2	NNC	ENSMUSG00000027079.16	novel	1132	2	NA	NA	14	-172	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	618	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGTGGATGTGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	84556449	84554000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_84554562_84556066
ENSMUSG00000027080.7_84508746_84518231_1	chr2	+	1731	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	0	328	0	-328	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAGTTCTGGGATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	84508745	84518231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
ENSMUSG00000027080.7_84508848_84518305_1	chr2	+	1703	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	102	254	59	-254	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAGATTCAACAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	84508847	84518305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
ENSMUSG00000027080.7_84508907_84518347_1	chr2	+	1686	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	161	212	118	-212	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTTTCTCACCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	84508906	84518347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
ENSMUSG00000027080.7_84508910_84517151_1	chr2	+	940	5	FSM	ENSMUSG00000027080.7	ENST00000337672.9	1442	5	121	381	121	-381	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTAGGTCCATCTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	84508909	84517151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_84509006_84515534_84515792_84515946_84516297_84516485_84516666_84517094
ENSMUSG00000027080.7_84508973_84517230_1	chr2	+	956	5	FSM	ENSMUSG00000027080.7	ENST00000337672.9	1442	5	184	302	184	-302	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTATGGGCAGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	84508972	84517230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_84509006_84515534_84515792_84515946_84516297_84516485_84516666_84517094
ENSMUSG00000027080.7_84515616_84518559_1	chr2	+	1718	4	ISM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	6870	0	6827	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGCTGGAGTCTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	84515615	84518559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84515792_84515946_84516044_84516534_84516630_84517209
ENSMUSG00000027080.7_84515642_84517352_1	chr2	+	938	4	ISM	ENSMUSG00000027080.7	ENST00000337672.9	1442	5	6853	180	6853	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGACCCTGTTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	84515641	84517352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84515792_84515946_84516297_84516485_84516666_84517094
ENSMUSG00000027080.7_84515666_84518559_1	chr2	+	1668	4	ISM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	6920	0	6877	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGCTGGAGTCTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	84515665	84518559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84515792_84515946_84516044_84516534_84516630_84517209
ENSMUSG00000027080.7_84515711_84517445_1	chr2	+	962	4	ISM	ENSMUSG00000027080.7	ENST00000337672.9	1442	5	6922	87	6922	-87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGGTTATGTCCAATT	NA	NA	NA	NA	NA	NA	NA	NA	84515710	84517445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84515792_84515946_84516297_84516485_84516666_84517094
ENSMUSG00000027088.11_69620056_69626286_1	chr2	+	903	4	FSM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	76	1281	62	-1280	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAGAATCTTTGCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69620055	69626286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_69620301_69620629_69620666_69622680_69622836_69625819
ENSMUSG00000027088.11_69620056_69626356_1	chr2	+	973	4	FSM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	76	1211	62	-1210	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACGGATTGTTTATATA	NA	NA	NA	NA	NA	NA	NA	NA	69620055	69626356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_69620301_69620629_69620666_69622680_69622836_69625819
ENSMUSG00000027088.11_69620176_69626427_1	chr2	+	924	4	FSM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	196	1140	182	-1139	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCATGCCACGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	69620175	69626427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_69620301_69620629_69620666_69622680_69622836_69625819
ENSMUSG00000027088.11_69622680_69626567_1	chr2	+	904	2	FSM	ENSMUSG00000027088.11	ENSMUST00000180290.2	3267	2	1364	999	1364	-999	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGATATGCCAACAATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	69622679	69626567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_69622836_69625819
ENSMUSG00000027088.11_69622723_69626630_1	chr2	+	924	2	FSM	ENSMUSG00000027088.11	ENSMUST00000180290.2	3267	2	1407	936	1407	-936	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAATATTAGAACCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	69622722	69626630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_69622836_69625819
ENSMUSG00000027088.11_69622784_69626689_1	chr2	+	922	2	FSM	ENSMUSG00000027088.11	ENSMUST00000180290.2	3267	2	1468	877	1468	-877	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAAGGCCACTTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	69622783	69626689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_69622836_69625819
ENSMUSG00000027091.15_83474779_83494966_1	chr2	+	2105	10	NNC	ENSMUSG00000027091.15	novel	2111	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGGCCTTTTTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	83474778	83494966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_83475072_83483701_83483804_83487359_83487472_83488358_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ENSMUSG00000027091.15_83474779_83494966_2	chr2	+	2103	10	NNC	ENSMUSG00000027091.15	novel	2111	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGGCCTTTTTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	83474778	83494966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491871_83492492_83492617_83494163
ENSMUSG00000027099.10_74656174_74707127_1	chr2	+	1275	10	FSM	ENSMUSG00000027099.10	ENSMUST00000028511.8	2950	10	27	1648	27	-1648	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGCATGTGGAACAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	74656173	74707127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
ENSMUSG00000027099.10_74678666_74707295_1	chr2	+	1158	8	ISM	ENSMUSG00000027099.10	ENSMUST00000028511.8	2950	10	22519	1480	22519	-1480	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCGTTAACCAGCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	74678665	74707295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_74678690_74689748_74689822_74697214_74697292_74698663_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
ENSMUSG00000027099.10_74697217_74707450_1	chr2	+	1214	6	ISM	ENSMUSG00000027099.10	ENSMUST00000028511.8	2950	10	41070	1325	41070	-1325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAGGATTATAGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	74697216	74707450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_74697292_74698663_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
ENSMUSG00000027099.10_74698729_74707569_1	chr2	+	1193	5	ISM	ENSMUSG00000027099.10	ENSMUST00000028511.8	2950	10	42582	1206	42582	-1206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTTAGCCTTTTCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	74698728	74707569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
ENSMUSG00000027102.5_74535249_74536975_1	chr2	+	314	3	FSM	ENSMUSG00000027102.5	ENST00000429017.2	1598	3	30	1254	0	-181	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTGGCCCTCACGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	74535248	74536975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_74535297_74536314_74536463_74536857
ENSMUSG00000027104.19_73648610_73684215_1	chr2	-	1758	8	ISM	ENSMUSG00000027104.19	ENST00000409437.5	3724	11	19869	1742	9419	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTGGAATCTTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	73684215	73648609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138
ENSMUSG00000027104.19_73649166_73722938_1	chr2	-	795	6	NNC	ENSMUSG00000027104.19	novel	799	6	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	73722938	73649165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_73649493_73653545_73653651_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ENSMUSG00000027104.19_73649166_73722938_2	chr2	-	796	6	FSM	ENSMUSG00000027104.19	ENST00000409499.5	799	6	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	73722938	73649165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_73649493_73653544_73653651_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ENSMUSG00000027104.19_73649166_73722938_3	chr2	-	795	6	NNC	ENSMUSG00000027104.19	novel	799	6	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	73722938	73649165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_73649493_73653544_73653651_73693512_73693583_73704014_73704090_73710628_73710726_73722818
ENSMUSG00000027107.4_73396244_73397134_1	chr2	-	497	2	ISM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	13548	2685	13548	-2685	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCTGGGAGAGTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	73397134	73396243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73396652_73397045
ENSMUSG00000027107.4_73396435_73398479_1	chr2	-	501	3	ISM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	12203	2876	12203	-2876	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTCACACTTACCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	73398479	73396434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73396652_73397045_73397286_73398435
ENSMUSG00000027107.4_73396503_73398512_1	chr2	-	466	3	ISM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	12170	2944	12170	-2944	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACCTCTGTCCCAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	73398512	73396502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73396652_73397045_73397286_73398435
ENSMUSG00000027107.4_73396573_73398605_1	chr2	-	489	3	ISM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	12077	3014	12077	-3014	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGCTGGCTGTGTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	73398605	73396572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73396652_73397045_73397286_73398435
ENSMUSG00000027107.4_73397096_73400824_1	chr2	-	488	3	ISM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	9858	3537	9858	-3537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGTGAAGTACATTGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	73400824	73397095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73397286_73398435_73398660_73400750
ENSMUSG00000027107.4_73397146_73400876_1	chr2	-	490	3	ISM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	9806	3587	9806	-3587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCACTCTCCGCTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	73400876	73397145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73397286_73398435_73398660_73400750
ENSMUSG00000027107.4_73397196_73400932_1	chr2	-	496	3	ISM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	9750	3637	9750	-3637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAGATATATCTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	73400932	73397195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73397286_73398435_73398660_73400750
ENSMUSG00000027107.4_73398450_73401807_1	chr2	-	499	3	ISM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	8875	4891	8875	-4891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGGTGCGGAAGGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	73401807	73398449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73398660_73400750_73400989_73401756
ENSMUSG00000027107.4_73398499_73401860_1	chr2	-	503	3	ISM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	8822	4940	8822	-4940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGTCATCAACACACACCA	NA	NA	NA	NA	NA	NA	NA	NA	73401860	73398498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73398660_73400750_73400989_73401756
ENSMUSG00000027107.4_73398557_73401923_1	chr2	-	508	3	ISM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	8759	4998	8759	-4998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGAAGTATATGTTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	73401923	73398556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73398660_73400750_73400989_73401756
ENSMUSG00000027107.4_73398622_73403658_1	chr2	-	527	4	ISM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	7024	5063	7024	-5063	internal_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACCGTGTTCCTTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	73403658	73398621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73398660_73400750_73400989_73401756_73401953_73403603
ENSMUSG00000027107.4_73400924_73404906_1	chr2	-	493	5	ISM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	5776	7365	5776	-7365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGAAGCACTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	73404906	73400923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73400989_73401756_73401953_73403603_73403714_73404664_73404710_73404829
ENSMUSG00000027108.16_72923830_72929657_1	chr2	-	384	3	ISM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	115134	685	113647	-284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTATTTGTTTTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	72929657	72923829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_72924069_72927488_72927612_72929635
ENSMUSG00000027108.16_72923891_72929704_1	chr2	-	370	3	ISM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	115087	746	113600	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGTTTCTGAAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	72929704	72923890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_72924069_72927488_72927612_72929635
ENSMUSG00000027108.16_72924026_72930457_1	chr2	-	303	4	ISM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	114334	881	112847	-480	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGAGATATTATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	72930457	72924025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417
ENSMUSG00000027108.16_72924026_72930558_1	chr2	-	404	4	ISM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	114233	881	112746	-480	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGAGATATTATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	72930558	72924025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417
ENSMUSG00000027108.16_72930468_72987161_1	chr2	-	350	4	ISM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	57630	7323	56143	-6922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTGCTGAGGAGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	72987161	72930467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_72930559_72972241_72972340_72972651_72972733_72987081
ENSMUSG00000027108.16_72930517_72987215_1	chr2	-	355	4	ISM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	57576	7372	56089	-6971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTGGTCATTCCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	72987215	72930516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_72930559_72972241_72972340_72972651_72972733_72987081
ENSMUSG00000027108.16_72972652_73029872_1	chr2	-	385	3	ISM	ENSMUSG00000027108.16	ENSMUST00000100015.6	905	8	14805	4781	13432	-4781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTGTAAATACTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	73029872	72972651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_72972733_72987081_72987258_73029744
ENSMUSG00000027108.16_73029743_73043304_1	chr2	-	375	3	ISM	ENSMUSG00000027108.16	ENSMUST00000100015.6	905	8	1373	61872	0	-61872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTACAGCAGTTTATTAAG	NA	NA	NA	NA	NA	NA	NA	NA	73043304	73029742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73029873_73033668_73033813_73043203
ENSMUSG00000027115.15_109122368_109148410_1	chr2	+	1462	10	ISM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	11285	23682	11285	-23682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGACCTTCCCACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	109122367	109148410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219
ENSMUSG00000027115.15_109128684_109168999_1	chr2	+	1405	8	ISM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	17601	3093	17601	-3093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAAACAGACTGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	109128683	109168999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911
ENSMUSG00000027115.15_109133227_109171664_1	chr2	+	1399	8	ISM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	22144	428	22144	-428	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATTTTCAGCAAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	109133226	109171664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ENSMUSG00000027115.15_109140956_109171975_1	chr2	+	1397	6	ISM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	29873	117	29873	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGGTGTAAAAATGTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	109140955	109171975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ENSMUSG00000027115.15_109148291_109172092_1	chr2	+	1385	5	ISM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	37208	0	37208	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTGGTTTTCCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	109148290	109172092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ENSMUSG00000027122.16_106794922_106795963_1	chr2	-	491	2	ISM	ENSMUSG00000027122.16	ENSMUST00000093883.4	1363	5	4773	148	4773	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGGTAAAAACTTAACAT	NA	NA	NA	NA	NA	NA	NA	NA	106795963	106794921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_106795216_106795766
ENSMUSG00000027122.16_106799530_106804742_1	chr2	-	500	2	ISM	ENSMUSG00000027122.16	ENSMUST00000028536.13	3337	5	27	6658	27	-4756	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAAGACAGCTTGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	106804742	106799529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_106799904_106804616
ENSMUSG00000027130.16_112146595_112183305_1	chr2	+	1909	16	ISM	ENSMUSG00000027130.16	ENST00000560164.5	3035	23	9	7547	9	-3069	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCCCAGCTCAAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	112146594	112183305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112146631_112163727_112163823_112164713_112164846_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236
ENSMUSG00000027130.16_112163726_112183405_1	chr2	+	1975	15	ISM	ENSMUSG00000027130.16	ENST00000560164.5	3035	23	17140	7447	17140	-2969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGCACTGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	112163725	112183405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112163823_112164713_112164846_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236
ENSMUSG00000027130.16_112164712_112184583_1	chr2	+	1945	15	ISM	ENSMUSG00000027130.16	ENST00000560164.5	3035	23	18126	6269	18126	-1791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAAAGAGGGCATTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	112164711	112184583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112164846_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518
ENSMUSG00000027130.16_112167701_112184720_1	chr2	+	1950	14	ISM	ENSMUSG00000027130.16	ENST00000560164.5	3035	23	21115	6132	21115	-1654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTGTATTAACCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	112167700	112184720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518
ENSMUSG00000027130.16_112168202_112185336_1	chr2	+	1906	14	ISM	ENSMUSG00000027130.16	ENST00000560164.5	3035	23	21616	5516	21616	-1038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGCCCATCTAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	112168201	112185336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319
ENSMUSG00000027130.16_112168255_112185386_1	chr2	+	1903	14	ISM	ENSMUSG00000027130.16	ENST00000560164.5	3035	23	21669	5466	21669	-988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAATGTGGAGCAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112168254	112185386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319
ENSMUSG00000027130.16_112168289_112185454_1	chr2	+	1937	14	ISM	ENSMUSG00000027130.16	ENST00000560164.5	3035	23	21703	5398	21703	-920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTATTACCGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	112168288	112185454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319
ENSMUSG00000027130.16_112169667_112186857_1	chr2	+	1903	14	ISM	ENSMUSG00000027130.16	ENST00000560164.5	3035	23	23081	3995	23081	483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTATCCAGATGAAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	112169666	112186857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804
ENSMUSG00000027130.16_112169778_112187843_1	chr2	+	1886	15	ISM	ENSMUSG00000027130.16	ENST00000560164.5	3035	23	23192	3009	23192	1469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCCTATACATATGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	112169777	112187843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828
ENSMUSG00000027130.16_112172263_112188159_1	chr2	+	1884	15	ISM	ENSMUSG00000027130.16	ENST00000560164.5	3035	23	25677	2693	25677	-1313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCTGATGAGGACGAAG	NA	NA	NA	NA	NA	NA	NA	NA	112172262	112188159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112
ENSMUSG00000027130.16_112172315_112188213_1	chr2	+	1886	15	ISM	ENSMUSG00000027130.16	ENST00000560164.5	3035	23	25729	2639	25729	-1259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGACCAAGGATAAATACA	NA	NA	NA	NA	NA	NA	NA	NA	112172314	112188213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112
ENSMUSG00000027130.16_112172362_112188269_1	chr2	+	1895	15	ISM	ENSMUSG00000027130.16	ENST00000560164.5	3035	23	25776	2583	25776	-1203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCCAGGACCTACTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	112172361	112188269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112
ENSMUSG00000027130.16_112174239_112188926_1	chr2	+	1905	15	ISM	ENSMUSG00000027130.16	ENST00000560164.5	3035	23	27653	1926	27653	-546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGTTTTGTTGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	112174238	112188926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850
ENSMUSG00000027130.16_112174482_112190852_1	chr2	+	1963	15	ISM	ENSMUSG00000027130.16	ENST00000560164.5	3035	23	27896	0	27896	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTGTGGGAGATTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	112174481	112190852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ENSMUSG00000027131.4_112193356_112197792_1	chr2	-	544	3	ISM	ENSMUSG00000027131.4	ENST00000249209.8	690	4	455	-7	71	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAAGTTCCCCTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	112197792	112193355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_112193700_112194496_112194651_112197746
ENSMUSG00000027131.4_112193514_112198221_1	chr2	-	513	4	FSM	ENSMUSG00000027131.4	ENST00000249209.8	690	4	26	151	26	137	multi-exon	FALSE	canonical	NA	NA	NA	NA	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACTTATGACTGAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	112198221	112193513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_112193700_112194496_112194651_112197746_112197862_112198163
ENSMUSG00000027131.4_112193651_112197863_1	chr2	-	166	2	FSM	ENSMUSG00000027131.4	ENST00000559421.1	166	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCATATGGACCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	112197863	112193650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_112193700_112197746
ENSMUSG00000027131.4_112194138_112197792_2	chr2	-	454	2	FSM	ENSMUSG00000027131.4	ENST00000557879.1	529	2	71	4	71	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATGGTTAAAGTTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	112197792	112194137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_112194518_112197718
ENSMUSG00000027132.4_112209571_112243003_1	chr2	+	1289	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	15	1582	15	-1582	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTGCATTCAGAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	112209570	112243003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ENSMUSG00000027132.4_112209677_112243054_1	chr2	+	1234	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	121	1531	121	-1531	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGTCTTCACTCGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	112209676	112243054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ENSMUSG00000027132.4_112234598_112243182_1	chr2	+	1244	9	ISM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	25042	1403	25042	-1403	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTGCAGCTAATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	112234597	112243182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ENSMUSG00000027132.4_112236516_112243331_1	chr2	+	1231	7	ISM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	26960	1254	26960	-1254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAATTAAAAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	112236515	112243331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ENSMUSG00000027132.4_112236579_112243410_1	chr2	+	1247	7	ISM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	27023	1175	27023	-1175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTGAAATATATTCGACA	NA	NA	NA	NA	NA	NA	NA	NA	112236578	112243410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ENSMUSG00000027132.4_112237953_112243561_1	chr2	+	1256	6	ISM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	28397	1024	28397	-1024	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAAATGTCCATGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	112237952	112243561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ENSMUSG00000027132.4_112238022_112243607_1	chr2	+	1233	6	ISM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	28466	978	28466	-978	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAGAGTTCTAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	112238021	112243607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ENSMUSG00000027132.4_112239548_112243879_1	chr2	+	1274	3	ISM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	29992	706	29992	-706	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTTGTTTTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112239547	112243879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112239576_112240487_112240582_112242727
ENSMUSG00000027133.4_112092371_112092801_1	chr2	+	138	2	FSM	ENSMUSG00000027133.4	ENST00000557912.1	140	2	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTAATCTTTTACGCTG	NA	NA	NA	NA	NA	NA	NA	NA	112092370	112092801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_112092423_112092715
ENSMUSG00000027160.17_109848509_109870948_1	chr2	+	322	4	ISM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	347	4713	347	-4713	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAATGGAAGAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	109848508	109870948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918
ENSMUSG00000027160.17_109852318_109871077_1	chr2	+	309	3	ISM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	4156	4584	4156	-4584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTTTAATTGAAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	109852317	109871077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_109852360_109862676_109862785_109870918
ENSMUSG00000027160.17_109862675_109871637_1	chr2	+	301	3	ISM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	14513	4024	14513	-4024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAAAAAGGAAATCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	109862674	109871637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_109862785_109870918_109871078_109871605
ENSMUSG00000027160.17_109871657_109874754_1	chr2	+	314	2	ISM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	23495	907	23495	-907	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAGCATACCTAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	109871656	109874754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_109871748_109874531
ENSMUSG00000027162.8_109721198_109728297_1	chr2	+	1177	5	FSM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	0	3051	0	-3051	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACCTTTTTATTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	109721197	109728297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590
ENSMUSG00000027162.8_109726587_109728480_1	chr2	+	1094	2	ISM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	5389	2868	5389	-2868	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCATAAATTATACATGC	NA	NA	NA	NA	NA	NA	NA	NA	109726586	109728480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_109726791_109727590
ENSMUSG00000027162.8_109726706_109728591_1	chr2	+	1086	2	ISM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	5508	2757	5508	-2757	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTCAGTGCTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	109726705	109728591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_109726791_109727590
ENSMUSG00000027163.14_101716608_101731594_1	chr2	+	784	6	FSM	ENSMUSG00000027163.14	ENSMUST00000028584.8	1191	6	10	397	10	170	multi-exon	FALSE	canonical	NA	NA	NA	NA	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGAAGGCCCTGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	101716607	101731594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_101716665_101725479_101725606_101727384_101727525_101729212_101729248_101730213_101730318_101731272
ENSMUSG00000027163.14_101725513_101731700_1	chr2	+	800	5	ISM	ENSMUSG00000027163.14	ENSMUST00000028584.8	1191	6	8915	291	-1870	276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGTGGCACTCACCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	101725512	101731700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_101725606_101727384_101727525_101729212_101729248_101730213_101730318_101731272
ENSMUSG00000027163.14_101725554_101731731_1	chr2	+	783	4	NNC	ENSMUSG00000027163.14	novel	1191	6	NA	NA	-1829	-260	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATTAGCTCGGGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	101725553	101731731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_101725606_101727384_101727525_101730185_101730318_101731272
ENSMUSG00000027163.14_101725566_101731749_1	chr2	+	796	5	ISM	ENSMUSG00000027163.14	ENSMUST00000028584.8	1191	6	8968	242	-1817	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACTTCCAGCCCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	101725565	101731749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_101725606_101727384_101727525_101729212_101729248_101730213_101730318_101731272
ENSMUSG00000027163.14_101727407_101731824_1	chr2	+	803	4	NNC	ENSMUSG00000027163.14	novel	1191	6	NA	NA	22	-167	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGCAGACAGATAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	101727406	101731824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_101727525_101729212_101729248_101730213_101730318_101731278
ENSMUSG00000027163.14_101727478_101731991_1	chr2	+	905	4	ISM	ENSMUSG00000027163.14	ENSMUST00000028584.8	1191	6	10880	0	93	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCTGGTCGTGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	101727477	101731991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_101727525_101729212_101729248_101730213_101730318_101731272
ENSMUSG00000027163.14_101729213_101731991_1	chr2	+	858	3	ISM	ENSMUSG00000027163.14	ENST00000263401.10	435	4	1828	-567	1828	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCTGGTCGTGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	101729212	101731991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_101729248_101730213_101730318_101731272
ENSMUSG00000027167.12_105531372_105644695_1	chr2	-	2325	5	ISM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	90214	0	90214	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCTTTCTCTTACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	105644695	105531371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610
ENSMUSG00000027167.12_105531502_105662532_1	chr2	-	2252	6	ISM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	72377	130	72377	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTAAAACAACCTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	105662532	105531501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475
ENSMUSG00000027167.12_105531950_105734689_1	chr2	-	2250	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	220	578	220	-578	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATACTCTATTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	105734689	105531949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ENSMUSG00000027167.12_105532009_105734828_1	chr2	-	2330	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	81	637	81	-637	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATATTTTAAAGCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	105734828	105532008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ENSMUSG00000027168.22_105499280_105523145_1	chr2	+	572	5	ISM	ENSMUSG00000027168.22	ENST00000638965.1	791	6	15	2657	15	-237	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGCCACCCATGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	105499279	105523145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_105499395_105521909_105522069_105522538_105522622_105522814_105522966_105523081
ENSMUSG00000027168.22_105506196_105515415_1	chr2	+	578	5	ISM	ENSMUSG00000027168.22	ENST00000639034.2	1794	11	418	7967	-276	-7967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGGTCTGTACCAACGAT	NA	NA	NA	NA	NA	NA	NA	NA	105506195	105515415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_105506318_105510154_105510235_105510591_105510653_105514172_105514304_105515231
ENSMUSG00000027168.22_105510602_105527100_1	chr2	+	1559	9	FSM	ENSMUSG00000027168.22	ENST00000638963.1	1559	9	3	-3	3	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTCCCCATCTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	105510601	105527100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_105510653_105514172_105514304_105515231_105515448_105516122_105516289_105521909_105522069_105522538_105522622_105522814_105522966_105523081_105523198_105526614
ENSMUSG00000027168.22_105512808_105525802_1	chr2	+	1387	10	FSM	ENSMUSG00000027168.22	ENST00000481563.6	1504	10	117	0	117	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTCTCTGCAGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	105512807	105525802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_105512979_105514172_105514304_105515095_105515138_105515231_105515448_105516122_105516289_105521909_105522069_105522538_105522622_105522814_105522966_105523081_105523198_105525650
ENSMUSG00000027168.22_105514099_105525802_1	chr2	+	1140	8	FSM	ENSMUSG00000027168.22	ENST00000638755.1	1066	8	-74	0	-74	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTCTCTGCAGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	105514098	105525802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_105514304_105515231_105515340_105516122_105516289_105521909_105522069_105522538_105522622_105522814_105522966_105523081_105523198_105525650
ENSMUSG00000027168.22_105523116_105527689_1	chr2	+	1308	3	ISM	ENSMUSG00000027168.22	ENSMUST00000111082.8	3116	12	16642	17	8943	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTTTTTAACCTTATA	NA	NA	NA	NA	NA	NA	NA	NA	105523115	105527689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_105523198_105525650_105525802_105526614
ENSMUSG00000027170.13_104830034_104837168_1	chr2	-	608	6	ISM	ENSMUSG00000027170.13	ENSMUST00000111110.3	817	8	10220	0	10220	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTTCTAAGTAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	104837168	104830033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100
ENSMUSG00000027170.13_104830587_104843290_1	chr2	-	566	6	ISM	ENSMUSG00000027170.13	ENSMUST00000111110.3	817	8	4098	553	4098	-553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	831	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGCCTATAATATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	104843290	104830586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195
ENSMUSG00000027170.13_104831683_104843626_1	chr2	-	522	6	ISM	ENSMUSG00000027170.13	ENSMUST00000028592.12	1283	11	3799	1682	3762	-1649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTGACACAATGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	104843626	104831682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542
ENSMUSG00000027170.13_104831691_104843615_1	chr2	-	502	6	NNC	ENSMUSG00000027170.13	novel	817	8	NA	NA	3773	-1657	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTTCTTTTGACACA	NA	NA	NA	NA	NA	NA	NA	NA	104843615	104831690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843286_104843538
ENSMUSG00000027170.13_104835306_104844157_1	chr2	-	517	6	ISM	ENSMUSG00000027170.13	ENSMUST00000028592.12	1283	11	3268	5305	3231	-5272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTATCAGAATAACAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	104844157	104835305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089
ENSMUSG00000027170.13_104836198_104845157_1	chr2	-	513	6	ISM	ENSMUSG00000027170.13	ENSMUST00000028592.12	1283	11	2268	6197	2231	-6164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTTCTTTTTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	104845157	104836197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114
ENSMUSG00000027170.13_104837099_104845249_1	chr2	-	578	5	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	2139	-7065	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	939	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGGACAGTGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	104845249	104837098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_104837185_104843195_104843286_104843538_104843667_104844089_104844229_104845114
ENSMUSG00000027170.13_104843196_104847388_1	chr2	-	589	5	ISM	ENSMUSG00000027170.13	ENSMUST00000028592.12	1283	11	37	13195	0	-13162	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCCGAAGCGCTGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	104847388	104843195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000027170.13_104843196_104847388_2	chr2	-	588	5	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	0	-13162	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	811	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCCGAAGCGCTGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	104847388	104843195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_104843286_104843538_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000027171.11_104661086_104675415_1	chr2	-	2333	4	ISM	ENSMUSG00000027171.11	ENSMUST00000028593.11	2872	6	4806	0	4806	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAACAAAAACGTAG	NA	NA	NA	NA	NA	NA	NA	NA	104675415	104661085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104663156_104669666_104669800_104672399_104672449_104675334
ENSMUSG00000027171.11_104661086_104679442_1	chr2	-	2438	5	ISM	ENSMUSG00000027171.11	ENSMUST00000028593.11	2872	6	779	0	779	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAACAAAAACGTAG	NA	NA	NA	NA	NA	NA	NA	NA	104679442	104661085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104663156_104669666_104669800_104672399_104672449_104675334_104675499_104679420
ENSMUSG00000027171.11_104661255_104679485_1	chr2	-	2312	5	ISM	ENSMUSG00000027171.11	ENSMUST00000028593.11	2872	6	736	169	736	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGATTCTCCGAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	104679485	104661254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104663156_104669666_104669800_104672399_104672449_104675334_104675499_104679420
ENSMUSG00000027171.11_104661304_104679545_1	chr2	-	2323	5	ISM	ENSMUSG00000027171.11	ENSMUST00000028593.11	2872	6	676	218	676	-218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCATATGTGCTAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	104679545	104661303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104663156_104669666_104669800_104672399_104672449_104675334_104675499_104679420
ENSMUSG00000027171.11_104661533_104680221_1	chr2	-	2425	6	FSM	ENSMUSG00000027171.11	ENSMUST00000028593.11	2872	6	0	447	0	-447	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGAATGGTAGAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	104680221	104661532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_104663156_104669666_104669800_104672399_104672449_104675334_104675499_104679420_104679546_104679890
ENSMUSG00000027173.8_104552313_104553702_1	chr2	-	406	4	ISM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	19521	184	19521	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACTCACCCAGACATCT	NA	NA	NA	NA	NA	NA	NA	NA	104553702	104552312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104552464_104553220_104553300_104553383_104553510_104553652
ENSMUSG00000027173.8_104552373_104553760_1	chr2	-	404	4	ISM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	19463	244	19463	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGATGAGGATTCAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	104553760	104552372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104552464_104553220_104553300_104553383_104553510_104553652
ENSMUSG00000027173.8_104553266_104555020_1	chr2	-	409	4	ISM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	18203	1137	18203	-1137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTCTGGCCATACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	104555020	104553265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104553300_104553383_104553510_104553652_104553796_104554914
ENSMUSG00000027173.8_104553702_104557565_1	chr2	-	405	3	ISM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	15658	1573	15658	-1573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGGCTGTTGCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	104557565	104553701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104553796_104554914_104555127_104557466
ENSMUSG00000027173.8_104553760_104557625_1	chr2	-	407	3	ISM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	15598	1631	15598	-1631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTTTCTGAAGCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	104557625	104553759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104553796_104554914_104555127_104557466
ENSMUSG00000027173.8_104554925_104558482_1	chr2	-	447	3	ISM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	14741	2796	14741	-2796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCCTGGGTAAGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	104558482	104554924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104555127_104557466_104557657_104558427
ENSMUSG00000027173.8_104554994_104558520_1	chr2	-	416	3	ISM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	14703	2865	14703	-2865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGCAGATATTATAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	104558520	104554993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104555127_104557466_104557657_104558427
ENSMUSG00000027173.8_104557619_104560785_1	chr2	-	423	3	ISM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	12438	5490	12438	-5490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTACAACTTGTCGACCT	NA	NA	NA	NA	NA	NA	NA	NA	104560785	104557618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104557657_104558427_104558556_104560528
ENSMUSG00000027173.8_104560574_104573085_1	chr2	-	405	2	ISM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	138	8445	138	-8445	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAATCAGTTAGGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	104573085	104560573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104560920_104573026
ENSMUSG00000027176.9_104420963_104493783_1	chr2	+	1844	18	ISM	ENSMUSG00000027176.9	ENSMUST00000028599.8	2817	21	95	1991	95	-1991	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAGCACGTAAGATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	104420962	104493783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_104421048_104439215_104439318_104439435_104439532_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638
ENSMUSG00000027176.9_104476755_104495276_1	chr2	+	1800	16	ISM	ENSMUSG00000027176.9	ENSMUST00000028599.8	2817	21	55887	498	55887	-498	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCTGCCTCTGAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	104476754	104495276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
ENSMUSG00000027176.9_104482006_104495774_1	chr2	+	1819	11	ISM	ENSMUSG00000027176.9	ENSMUST00000028599.8	2817	21	61138	0	61138	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCTGTTTCTTTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	104482005	104495774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
ENSMUSG00000027177.15_104258047_104261149_1	chr2	-	2708	2	ISM	ENSMUSG00000027177.15	ENST00000456517.2	7309	16	62779	1215	62779	-1215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1090	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATACAGTGAAAACCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	104261149	104258046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104260677_104261071
ENSMUSG00000027177.15_104259028_104265028_1	chr2	-	2701	7	ISM	ENSMUSG00000027177.15_ENSMUSG00000084516.3	ENSMUST00000111124.8	4125	16	59007	-1098	-5743	178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	872	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTTTTACATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	104265028	104259027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934
ENSMUSG00000027177.15_104259398_104268284_1	chr2	-	2700	10	ISM	ENSMUSG00000027177.15	ENSMUST00000111124.8	4125	16	55751	-728	55644	728	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCAGTTAGTAGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	104268284	104259397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195
ENSMUSG00000027177.15_104259550_104269663_1	chr2	-	2705	11	ISM	ENSMUSG00000027177.15	ENSMUST00000111124.8	4125	16	54372	-576	54265	576	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTCAGTAGAGTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	104269663	104259549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574
ENSMUSG00000027177.15_104259588_104269759_1	chr2	-	2763	11	ISM	ENSMUSG00000027177.15	ENSMUST00000111124.8	4125	16	54276	-538	54169	538	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGCAGCACTTATAATT	NA	NA	NA	NA	NA	NA	NA	NA	104269759	104259587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574
ENSMUSG00000027177.15_104259697_104261196_1	chr2	-	1105	2	ISM	ENSMUSG00000027177.15	ENSMUST00000111124.8	4125	16	62839	-429	62732	429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCTCTTAATGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	104261196	104259696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104260677_104261071
ENSMUSG00000027177.15_104259913_104276926_1	chr2	-	2715	14	ISM	ENSMUSG00000027177.15	ENSMUST00000111124.8	4125	16	47109	-213	47002	213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCTTCTAACTAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	104276926	104259912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856
ENSMUSG00000027177.15_104260126_104301240_1	chr2	-	2703	15	ISM	ENSMUSG00000027177.15	ENSMUST00000111124.8	4125	16	22795	0	22688	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTAGCCATGGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	104301240	104260125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093
ENSMUSG00000027177.15_104261070_104301871_1	chr2	-	2785	14	ISM	ENSMUSG00000027177.15	ENSMUST00000111124.8	4125	16	22164	944	22057	-870	internal_fragment	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCTGTGCCTGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	104301871	104261069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093
ENSMUSG00000027177.15_104261530_104301974_1	chr2	-	2725	13	ISM	ENSMUSG00000027177.15	ENSMUST00000111124.8	4125	16	22061	1404	21954	-1330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGTGTTGACGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	104301974	104261529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093
ENSMUSG00000027177.15_104263609_104324350_1	chr2	-	2702	13	ISM	ENSMUSG00000027177.15	ENSMUST00000028600.14	7454	16	441	6783	-51	-3409	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATCGGATGTGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	104324350	104263608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104324292
ENSMUSG00000027177.15_104264008_104324528_1	chr2	-	2727	12	ISM	ENSMUSG00000027177.15	ENSMUST00000028600.14	7454	16	263	7182	61	-3808	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGCAAACCATCATCATTG	NA	NA	NA	NA	NA	NA	NA	NA	104324528	104264007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104324292
ENSMUSG00000027177.15_104269575_104301722_1	chr2	-	1145	5	ISM	ENSMUSG00000027177.15	ENSMUST00000111124.8	4125	16	22313	9449	22206	-9375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCACTTTATAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	104301722	104269574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093
ENSMUSG00000027177.15_104270547_104301871_1	chr2	-	1113	4	ISM	ENSMUSG00000027177.15	ENSMUST00000111124.8	4125	16	22164	10421	22057	-10347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTGAAGTCACATGTACA	NA	NA	NA	NA	NA	NA	NA	NA	104301871	104270546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104270638_104271589_104271710_104276856_104276981_104301093
ENSMUSG00000027177.15_104301223_104323651_1	chr2	-	1056	2	ISM	ENSMUSG00000027177.15	ENSMUST00000111124.8	4125	16	384	41097	277	-41023	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACCAGAGAATATTATGT	NA	NA	NA	NA	NA	NA	NA	NA	104323651	104301222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104302193_104323565
ENSMUSG00000027177.15_104301284_104323703_1	chr2	-	1047	2	ISM	ENSMUSG00000027177.15	ENSMUST00000111124.8	4125	16	332	41158	225	-41084	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGCAAGTGGCCACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	104323703	104301283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104302193_104323565
ENSMUSG00000027177.15_104301436_104323856_1	chr2	-	1048	2	ISM	ENSMUSG00000027177.15	ENSMUST00000111124.8	4125	16	179	41310	72	-41236	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGATGAGTATAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	104323856	104301435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_104302193_104323565
ENSMUSG00000027180.13_103858066_103890354_1	chr2	+	1509	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	0	3231	0	2486	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGAAGGGGAGGCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	103858065	103890354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ENSMUSG00000027180.13_103858189_103890354_1	chr2	+	1386	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	123	3231	0	2486	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGAAGGGGAGGCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	103858188	103890354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ENSMUSG00000027180.13_103860703_103890522_1	chr2	+	1417	10	ISM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	2637	3063	2498	2654	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGAAATGTTGTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	103860702	103890522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ENSMUSG00000027180.13_103864041_103890699_1	chr2	+	1418	9	ISM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	5975	2886	5836	-2649	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTTTCTACTTAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	103864040	103890699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ENSMUSG00000027180.13_103876161_103891034_1	chr2	+	1416	7	ISM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	18095	2551	17956	-2314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTTTGGGCTTTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	103876160	103891034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ENSMUSG00000027180.13_103880635_103891160_1	chr2	+	1430	5	ISM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	22569	2425	22430	-2188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTAGTCTAAATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	103880634	103891160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ENSMUSG00000027180.13_103885303_103891572_1	chr2	+	1415	2	ISM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	27237	2013	27098	-1776	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATCAGAATATTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	103885302	103891572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_103885372_103890226
ENSMUSG00000027184.15_103595084_103598773_1	chr2	-	2148	2	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	28676	-279	28676	279	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTCAGGGAATGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	103598773	103595083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_103597209_103598750
ENSMUSG00000027184.15_103595180_103598815_1	chr2	-	2094	2	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	28634	-183	28634	183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGATGGTGTGTTACGTG	NA	NA	NA	NA	NA	NA	NA	NA	103598815	103595179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_103597209_103598750
ENSMUSG00000027184.15_103595363_103599895_1	chr2	-	2127	4	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	27554	0	27554	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTCATGTGTGGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	103599895	103595362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779
ENSMUSG00000027184.15_103595595_103602159_1	chr2	-	2092	5	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	25290	232	25290	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTACTTTTAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	103602159	103595594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041
ENSMUSG00000027184.15_103595758_103603354_1	chr2	-	2148	7	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	24095	395	24095	-395	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCCATATGTTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	103603354	103595757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318
ENSMUSG00000027184.15_103596130_103606042_1	chr2	-	2110	10	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	21407	767	21407	-767	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTAAATTGCTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	103606042	103596129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954
ENSMUSG00000027184.15_103596163_103606110_1	chr2	-	2145	10	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	21339	800	21339	-800	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAGATATCAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	103606110	103596162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954
ENSMUSG00000027184.15_103596285_103606353_1	chr2	-	2098	11	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	21096	922	21096	-922	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTGGATCTTGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	103606353	103596284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278
ENSMUSG00000027184.15_103596400_103608371_1	chr2	-	2112	13	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	19078	1037	19078	-1037	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAATGTGAACTATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	103608371	103596399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307
ENSMUSG00000027184.15_103596559_103609553_1	chr2	-	2072	14	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	17896	1196	17896	-1196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTTCTGGCCAAACGAC	NA	NA	NA	NA	NA	NA	NA	NA	103609553	103596558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508
ENSMUSG00000027184.15_103596675_103609750_1	chr2	-	2067	15	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	17699	1312	17699	-1312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCATAGCTTTCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	103609750	103596674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677
ENSMUSG00000027184.15_103596724_103609821_1	chr2	-	2089	15	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	17628	1361	17628	-1361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTTGAAAGGAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	103609821	103596723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677
ENSMUSG00000027184.15_103596789_103609868_1	chr2	-	2071	15	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	17581	1426	17581	-1426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCTTGGATAAAATCTACA	NA	NA	NA	NA	NA	NA	NA	NA	103609868	103596788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677
ENSMUSG00000027184.15_103597020_103627213_1	chr2	-	2176	18	FSM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	236	1657	236	-1657	multi-exon	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCCCATAAAGACAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	103627213	103597019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ENSMUSG00000027184.15_103597076_103627213_1	chr2	-	2120	18	FSM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	236	1713	236	-1713	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTATTATCTATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	103627213	103597075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ENSMUSG00000027184.15_103597133_103627278_1	chr2	-	2128	18	FSM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	171	1770	171	-1770	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTATGTTTAATCGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	103627278	103597132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ENSMUSG00000027184.15_103598795_103627944_1	chr2	-	2152	18	ISM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	50	5509	50	-3432	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCGAGGCTCTGGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	103627944	103598794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ENSMUSG00000027184.15_103609676_103627449_1	chr2	-	765	4	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	0	14313	0	-14313	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGGTGTCTGGGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	103627449	103609675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_103609917_103613300_103613388_103613487_103613551_103627075
ENSMUSG00000027187.11_103284194_103315479_1	chr2	-	2581	13	NNC	ENSMUSG00000027187.11	novel	2613	13	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCTGACTTTGGAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	103315479	103284193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_103285167_103285422_103285501_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
ENSMUSG00000027188.9_102380357_102473114_1	chr2	+	2253	9	NNC	ENSMUSG00000027188.9	novel	2330	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTAGAAGGAGAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	102380356	102473114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_102380610_102411077_102411255_102416939_102417069_102445180_102445289_102464672_102464886_102466518_102466580_102469555_102469789_102471011_102471305_102472328
ENSMUSG00000027188.9_102380357_102473114_2	chr2	+	2259	9	FSM	ENSMUSG00000027188.9	ENST00000615849.4	2330	9	71	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTAGAAGGAGAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	102380356	102473114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_102380610_102411077_102411255_102416939_102417069_102445180_102445289_102464672_102464886_102466518_102466586_102469555_102469789_102471011_102471305_102472328
ENSMUSG00000027193.13_94243746_94248653_1	chr2	-	434	2	ISM	ENSMUSG00000027193.13	ENST00000420461.6	2014	13	19815	172	19815	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTATTGGAAAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	94248653	94243745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_94244127_94248600
ENSMUSG00000027193.13_94243773_94248732_1	chr2	-	486	2	ISM	ENSMUSG00000027193.13	ENST00000420461.6	2014	13	19736	199	19736	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTTGATGGTTTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	94248732	94243772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_94244127_94248600
ENSMUSG00000027193.13_94243947_94251803_1	chr2	-	477	5	ISM	ENSMUSG00000027193.13	ENST00000420461.6	2014	13	16665	373	16665	-373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAAAATGTAATGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	94251803	94243946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777
ENSMUSG00000027193.13_94244103_94252678_1	chr2	-	426	6	ISM	ENSMUSG00000027193.13	ENST00000420461.6	2014	13	15790	529	15790	-529	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCCGAGGTTGGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	94252678	94244102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641
ENSMUSG00000027193.13_94251832_94256004_1	chr2	-	486	5	ISM	ENSMUSG00000027193.13	ENST00000420461.6	2014	13	12464	8258	12464	-8258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTCGCTTGGCTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	94256004	94251831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935
ENSMUSG00000027193.13_94252681_94256055_1	chr2	-	458	4	ISM	ENSMUSG00000027193.13	ENST00000420461.6	2014	13	12413	9107	12413	-9107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACTGAATGCAGAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	94256055	94252680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_94252824_94253756_94253847_94255318_94255424_94255935
ENSMUSG00000027193.13_94253798_94257343_1	chr2	-	427	4	ISM	ENSMUSG00000027193.13	ENST00000420461.6	2014	13	11125	10224	11125	-10224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTAGAAACAAATTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	94257343	94253797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_94253847_94255318_94255424_94255935_94256143_94257277
ENSMUSG00000027193.13_94253831_94257429_1	chr2	-	480	4	ISM	ENSMUSG00000027193.13	ENST00000420461.6	2014	13	11039	10257	11039	-10257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGATGAGTTCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	94257429	94253830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_94253847_94255318_94255424_94255935_94256143_94257277
ENSMUSG00000027193.13_94255374_94257879_1	chr2	-	432	4	ISM	ENSMUSG00000027193.13	ENST00000420461.6	2014	13	10589	11800	10589	-11800	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAACCTCAGCACCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	94257879	94255373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_94255424_94255935_94256143_94257277_94257430_94257856
ENSMUSG00000027193.13_94256087_94268341_1	chr2	-	441	5	ISM	ENSMUSG00000027193.13	ENST00000420461.6	2014	13	127	12513	127	-12513	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAAAAGCTTACAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	94268341	94256086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94268268
ENSMUSG00000027193.13_94258425_94268317_1	chr2	-	271	3	ISM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	164	16398	151	-14851	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCAGATATACTGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	94268317	94258424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_94258485_94260023_94260186_94268268
ENSMUSG00000027193.13_94260137_94268481_1	chr2	-	262	2	ISM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	0	18110	0	-16563	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAAGCGATTAGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	94268481	94260136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_94260186_94268268
ENSMUSG00000027195.11_93863034_93988309_1	chr2	-	1896	11	NNC	ENSMUSG00000027195.11	novel	1902	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTTTTGATAGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	93988309	93863033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_93864007_93864271_93864422_93874223_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
ENSMUSG00000027195.11_93863034_93988309_4	chr2	-	1894	11	NNC	ENSMUSG00000027195.11	novel	1902	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTTTTGATAGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	93988309	93863033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875780_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
ENSMUSG00000027195.11_93863034_93988309_5	chr2	-	1895	11	NNC	ENSMUSG00000027195.11	novel	1902	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTTTTGATAGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	93988309	93863033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913518_93913620_93945337_93945414_93947774_93947822_93988054
ENSMUSG00000027195.11_93863034_93988309_7	chr2	-	1893	11	NNC	ENSMUSG00000027195.11	novel	1902	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTTTTGATAGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	93988309	93863033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947813_93988054
ENSMUSG00000027198.17_93525976_93570104_1	chr2	-	1354	6	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	82809	0	82790	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTCTAGAATGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	93570104	93525975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914
ENSMUSG00000027198.17_93526097_93593029_1	chr2	-	1365	7	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	59884	121	59865	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGAGTCATGAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	93593029	93526096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897
ENSMUSG00000027198.17_93526305_93626028_1	chr2	-	1300	9	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	26885	329	26866	-329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCCCAGCGCATCACTC	NA	NA	NA	NA	NA	NA	NA	NA	93626028	93526304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979
ENSMUSG00000027198.17_93526472_93628587_1	chr2	-	1295	10	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	24326	496	24307	-496	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCACCTCCCGGGGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	93628587	93526471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516
ENSMUSG00000027198.17_93526472_93628637_1	chr2	-	1345	10	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	24276	496	24257	-496	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCACCTCCCGGGGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	93628637	93526471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516
ENSMUSG00000027198.17_93526472_93628691_1	chr2	-	1399	10	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	24222	496	24203	-496	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCACCTCCCGGGGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	93628691	93526471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516
ENSMUSG00000027198.17_93533539_93636486_1	chr2	-	1392	10	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	16427	7563	16408	-7563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCTGCCTCTGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	93636486	93533538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369
ENSMUSG00000027198.17_93537579_93643782_1	chr2	-	1309	10	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	9131	11603	9112	-11603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGTGTGGGCGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	93643782	93537578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743
ENSMUSG00000027198.17_93537642_93643822_1	chr2	-	1286	10	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	9091	11666	9072	-11666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTCTGAATGGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	93643822	93537641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743
ENSMUSG00000027198.17_93537682_93643883_1	chr2	-	1307	10	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	9030	11706	9011	-11706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCTGCATCTCTGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	93643883	93537681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743
ENSMUSG00000027198.17_93569915_93644189_1	chr2	-	1405	8	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	8724	43939	8705	-43939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGAGAATGAAGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	93644189	93569914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743
ENSMUSG00000027198.17_93570027_93644189_1	chr2	-	1293	8	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	8724	44051	8705	-44051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTACGACCGCGTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	93644189	93570026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743
ENSMUSG00000027198.17_93592906_93652787_1	chr2	-	1383	8	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	126	66930	107	-66930	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGTAAGTGCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	93652787	93592905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
ENSMUSG00000027198.17_93621354_93652893_1	chr2	-	1366	7	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	20	95378	1	-95378	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGGCTGAGCTGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	93652893	93621353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
ENSMUSG00000027199.15_122425667_122430923_1	chr2	-	669	4	ISM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	10861	719	10861	-719	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAAAGGCAGCTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	122430923	122425666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122426091_122427852_122427970_122428617_122428682_122430859
ENSMUSG00000027199.15_122425732_122430981_1	chr2	-	662	4	ISM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	10803	784	10803	-784	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAGTCACTTGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	122430981	122425731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122426091_122427852_122427970_122428617_122428682_122430859
ENSMUSG00000027199.15_122425790_122431024_1	chr2	-	647	4	ISM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	10760	842	10760	-842	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTATTTACGATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	122431024	122425789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122426091_122427852_122427970_122428617_122428682_122430859
ENSMUSG00000027199.15_122425970_122433081_1	chr2	-	701	6	ISM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	8703	1022	8703	-1022	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGCTTGGGGCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	122433081	122425969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122426091_122427852_122427970_122428617_122428682_122430859_122431025_122431172_122431311_122432985
ENSMUSG00000027199.15_122427904_122434126_1	chr2	-	688	6	ISM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	7658	2956	7658	-2956	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGGTAGATGCCAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	122434126	122427903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122427970_122428617_122428682_122430859_122431025_122431172_122431311_122432985_122433177_122434062
ENSMUSG00000027199.15_122428618_122434258_1	chr2	-	754	5	ISM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	7526	3670	7526	-3670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTCTATTTTCACATCC	NA	NA	NA	NA	NA	NA	NA	NA	122434258	122428617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122428682_122430859_122431025_122431172_122431311_122432985_122433177_122434062
ENSMUSG00000027199.15_122430876_122440197_1	chr2	-	722	5	ISM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	1587	5928	1587	-5928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCCCTGTCATCAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	122440197	122430875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122431025_122431172_122431311_122432985_122433177_122434062_122434259_122440149
ENSMUSG00000027199.15_122430958_122440221_1	chr2	-	664	5	ISM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	1563	6010	1563	-6010	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTTTAAAGACCCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	122440221	122430957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122431025_122431172_122431311_122432985_122433177_122434062_122434259_122440149
ENSMUSG00000027199.15_122431001_122440284_1	chr2	-	684	5	ISM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	1500	6053	1500	-6053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGCGTAGGCATCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	122440284	122431000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122431025_122431172_122431311_122432985_122433177_122434062_122434259_122440149
ENSMUSG00000027199.15_122431280_122441654_1	chr2	-	663	5	ISM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	130	6332	130	-6332	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTGGCCGCTCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	122441654	122431279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122431311_122432985_122433177_122434062_122434259_122440149_122440369_122441628
ENSMUSG00000027199.15_122432986_122441784_1	chr2	-	762	4	ISM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	0	8038	0	-8038	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTCCCCAGATACAGGC	NA	NA	NA	NA	NA	NA	NA	NA	122441784	122432985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122433177_122434062_122434259_122440149_122440369_122441628
ENSMUSG00000027200.18_124495555_124508885_1	chr2	+	4831	19	FSM	ENSMUSG00000027200.18	ENST00000536845.7	5699	19	56	812	0	579	multi-exon	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCTTGGCAGAGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	124495554	124508885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_124495664_124496066_124496179_124496715_124496777_124496897_124496961_124497072_124497175_124497405_124497497_124497929_124498050_124498749_124498839_124499563_124499782_124499890_124500023_124500329_124500486_124500565_124500740_124501487_124501629_124501726_124501805_124502202_124502265_124502624_124502682_124504123_124504292_124505940_124507867_124507913
ENSMUSG00000027200.18_124495555_124508921_1	chr2	+	4867	19	FSM	ENSMUSG00000027200.18	ENST00000536845.7	5699	19	56	776	0	615	multi-exon	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCCTACTGACAGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	124495554	124508921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_124495664_124496066_124496179_124496715_124496777_124496897_124496961_124497072_124497175_124497405_124497497_124497929_124498050_124498749_124498839_124499563_124499782_124499890_124500023_124500329_124500486_124500565_124500740_124501487_124501629_124501726_124501805_124502202_124502265_124502624_124502682_124504123_124504292_124505940_124507867_124507913
ENSMUSG00000027200.18_124495555_124508999_1	chr2	+	4945	19	FSM	ENSMUSG00000027200.18	ENST00000536845.7	5699	19	56	698	0	-690	multi-exon	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGGAAGGCTCCTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	124495554	124508999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_124495664_124496066_124496179_124496715_124496777_124496897_124496961_124497072_124497175_124497405_124497497_124497929_124498050_124498749_124498839_124499563_124499782_124499890_124500023_124500329_124500486_124500565_124500740_124501487_124501629_124501726_124501805_124502202_124502265_124502624_124502682_124504123_124504292_124505940_124507867_124507913
ENSMUSG00000027200.18_124497114_124509314_1	chr2	+	4872	15	NNC	ENSMUSG00000027200.18	novel	5699	19	NA	NA	1559	-375	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTACCAATATTAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	124497113	124509314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_124497175_124497405_124497497_124497929_124498050_124498749_124498839_124499563_124499782_124499890_124500023_124500329_124500486_124500565_124500740_124501487_124501629_124501726_124501805_124502202_124502265_124502624_124502682_124504123_124504292_124505940_124507865_124507913
ENSMUSG00000027200.18_124497429_124509424_1	chr2	+	4900	14	ISM	ENSMUSG00000027200.18	ENST00000536845.7	5699	19	1930	273	1874	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTCTAACATGGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	124497428	124509424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_124497497_124497929_124498050_124498749_124498839_124499563_124499782_124499890_124500023_124500329_124500486_124500565_124500740_124501487_124501629_124501726_124501805_124502202_124502265_124502624_124502682_124504123_124504292_124505940_124507867_124507913
ENSMUSG00000027200.18_124499562_124509697_1	chr2	+	4898	11	ISM	ENSMUSG00000027200.18	ENST00000536845.7	5699	19	4063	0	4007	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTGATGTTAACAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	124499561	124509697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_124499782_124499890_124500023_124500329_124500486_124500565_124500740_124501487_124501629_124501726_124501805_124502202_124502265_124502624_124502682_124504123_124504292_124505940_124507867_124507913
ENSMUSG00000027200.18_124499678_124502237_1	chr2	+	859	7	ISM	ENSMUSG00000027200.18	ENST00000558014.5	5510	17	4183	7453	4123	-4992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGCCCACCTAGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	124499677	124502237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_124499782_124499890_124500023_124500329_124500486_124500565_124500740_124501487_124501629_124501726_124501805_124502163
ENSMUSG00000027200.18_124499927_124506045_1	chr2	+	851	7	ISM	ENSMUSG00000027200.18	ENST00000558014.5	5510	17	4432	3645	4372	-1184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGCCGTGTACTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	124499926	124506045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_124500023_124500329_124500486_124500565_124500740_124501487_124501629_124501726_124501805_124502163_124502265_124505940
ENSMUSG00000027200.18_124500465_124506270_1	chr2	+	845	6	ISM	ENSMUSG00000027200.18	ENST00000558014.5	5510	17	4970	3420	4910	-959	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCATGGCCGTGGACCAC	NA	NA	NA	NA	NA	NA	NA	NA	124500464	124506270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_124500486_124500565_124500740_124501487_124501629_124501726_124501805_124502163_124502265_124505940
ENSMUSG00000027200.18_124500574_124506040_1	chr2	+	579	6	ISM	ENSMUSG00000027200.18	ENST00000558816.5	4338	19	48601	2266	5019	-1189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGGAGTGGCCGTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	124500573	124506040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_124500740_124501487_124501629_124501726_124501805_124502202_124502265_124504123_124504156_124505940
ENSMUSG00000027200.18_124500647_124506079_1	chr2	+	545	6	ISM	ENSMUSG00000027200.18	ENST00000558816.5	4338	19	48674	2227	5092	-1150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCGGAAGAACAGAAAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	124500646	124506079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_124500740_124501487_124501629_124501726_124501805_124502202_124502265_124504123_124504156_124505940
ENSMUSG00000027200.18_124500675_124506401_1	chr2	+	846	5	ISM	ENSMUSG00000027200.18	ENST00000558014.5	5510	17	5180	3289	5120	-828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGCTTCAAGGAAAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	124500674	124506401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_124500740_124501487_124501629_124501726_124501805_124502163_124502265_124505940
ENSMUSG00000027200.18_124501532_124506211_1	chr2	+	540	5	ISM	ENSMUSG00000027200.18	ENST00000558816.5	4338	19	49559	2095	5977	-1018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACTCTACAGCAACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	124501531	124506211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_124501629_124501726_124501805_124502202_124502265_124504123_124504156_124505940
ENSMUSG00000027200.18_124501534_124506516_1	chr2	+	850	4	ISM	ENSMUSG00000027200.18	ENST00000558014.5	5510	17	6039	3174	5979	-713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATACATCCTTCTCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	124501533	124506516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_124501629_124501726_124501805_124502163_124502265_124505940
ENSMUSG00000027200.18_124501585_124506259_1	chr2	+	535	5	ISM	ENSMUSG00000027200.18	ENST00000558816.5	4338	19	49612	2047	6030	-970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGGATACAAAGTCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	124501584	124506259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_124501629_124501726_124501805_124502202_124502265_124504123_124504156_124505940
ENSMUSG00000027200.18_124501588_124506580_1	chr2	+	860	4	ISM	ENSMUSG00000027200.18	ENST00000558014.5	5510	17	6093	3110	6033	-649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTTACGAAGTCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	124501587	124506580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_124501629_124501726_124501805_124502163_124502265_124505940
ENSMUSG00000027200.18_124502182_124506719_1	chr2	+	862	2	ISM	ENSMUSG00000027200.18	ENST00000558014.5	5510	17	6687	2971	6627	-510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCCTCATGCTGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	124502181	124506719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_124502265_124505940
ENSMUSG00000027200.18_124502225_124506435_1	chr2	+	567	3	ISM	ENSMUSG00000027200.18	ENST00000558816.5	4338	19	50252	1871	6670	-794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTAGTCCTCCACCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	124502224	124506435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_124502265_124504123_124504156_124505940
ENSMUSG00000027201.17_124929662_124942312_1	chr2	-	1850	7	ISM	ENSMUSG00000027201.17	ENSMUST00000142718.8	2942	16	23231	1	23231	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	124942312	124929661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124940716_124940768_124942238
ENSMUSG00000027201.17_124929922_124951669_1	chr2	-	1833	10	ISM	ENSMUSG00000027201.17	ENSMUST00000067780.10	2999	16	13911	260	13874	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCCCACGATGTTAGATA	NA	NA	NA	NA	NA	NA	NA	NA	124951669	124929921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589
ENSMUSG00000027201.17_124929978_124951715_1	chr2	-	1823	10	ISM	ENSMUSG00000027201.17	ENSMUST00000067780.10	2999	16	13865	316	13828	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATGCAGTCTTAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	124951715	124929977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589
ENSMUSG00000027201.17_124930161_124952552_1	chr2	-	1821	11	ISM	ENSMUSG00000027201.17	ENSMUST00000067780.10	2999	16	13028	499	12991	-499	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATATAGAACTGATAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	124952552	124930160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399
ENSMUSG00000027201.17_124930521_124958793_1	chr2	-	1864	14	NNC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	6750	-859	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCCATTTTGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	124958793	124930520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957349_124957411_124958584
ENSMUSG00000027203.16_125089272_125092932_1	chr2	+	315	4	ISM	ENSMUSG00000027203.16	ENSMUST00000082122.14	1020	7	162	6736	-130	-6736	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGTAACATTTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	125089271	125092932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_125089322_125089683_125089817_125091085_125091178_125092892
ENSMUSG00000027203.16_125089402_125098843_1	chr2	+	627	4	ISM	ENSMUSG00000027203.16	ENSMUST00000082122.14	1020	7	292	825	0	-825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTAAGTCAATATGTT	NA	NA	NA	NA	NA	NA	NA	NA	125089401	125098843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768
ENSMUSG00000027203.16_125089629_125099387_1	chr2	+	582	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	227	1141	227	-281	multi-exon	TRUE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGAAGCATTTGGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	125089628	125099387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ENSMUSG00000027203.16_125089687_125099440_1	chr2	+	577	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	285	1088	285	-228	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGAACGATTCTGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	125089686	125099440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ENSMUSG00000027203.16_125089748_125099506_1	chr2	+	582	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	346	1022	346	-162	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGACTTGGTAAAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	125089747	125099506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ENSMUSG00000027203.16_125099006_125099800_1	chr2	+	579	2	ISM	ENSMUSG00000027203.16	ENSMUST00000082122.14	1020	7	9896	-132	9604	132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGACACTGGGACTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	125099005	125099800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_125099061_125099276
ENSMUSG00000027206.14_125673832_125681348_1	chr2	-	842	6	ISM	ENSMUSG00000027206.14	ENST00000542928.5	1582	11	19595	127	19595	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGAAGATTTTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	125681348	125673831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225
ENSMUSG00000027206.14_125673949_125684643_1	chr2	-	1136	9	ISM	ENSMUSG00000027206.14	ENST00000542928.5	1582	11	16300	244	16300	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	798	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAGAAAACAGCTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	125684643	125673948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541
ENSMUSG00000027206.14_125673954_125682314_1	chr2	-	847	7	ISM	ENSMUSG00000027206.14	ENST00000542928.5	1582	11	18629	249	18629	-249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATCCCAAGAAAACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	125682314	125673953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243
ENSMUSG00000027206.14_125674151_125690172_1	chr2	-	1115	11	ISM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	10887	1927	10771	-446	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTGAACCAGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	125690172	125674150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126
ENSMUSG00000027206.14_125674222_125686775_1	chr2	-	897	10	ISM	ENSMUSG00000027206.14	ENST00000542928.5	1582	11	14168	517	14168	-517	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGAACTGGATCATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	125686775	125674221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729
ENSMUSG00000027206.14_125675644_125691773_1	chr2	-	1154	11	ISM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	9286	3420	9170	-1939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTCTGCAGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	125691773	125675643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659
ENSMUSG00000027206.14_125676673_125700916_1	chr2	-	944	9	ISM	ENSMUSG00000027206.14	ENST00000542928.5	1582	11	27	2968	27	-2968	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGGGTTTTAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	125700916	125676672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125700855
ENSMUSG00000027206.14_125676673_125700916_2	chr2	-	1157	11	ISM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	143	4449	27	-2968	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGGGTTTTAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	125700916	125676672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ENSMUSG00000027206.14_125681225_125690204_1	chr2	-	727	6	ISM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	10855	7703	10739	-7520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGCTCTTTTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	125690204	125681224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126
ENSMUSG00000027206.14_125681338_125691733_1	chr2	-	688	7	ISM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	9326	7816	9210	-7633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCAAGAATTATGATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	125691733	125681337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659
ENSMUSG00000027206.14_125682244_125700916_1	chr2	-	722	7	ISM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	143	8722	27	-8539	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTGGATGTAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	125700916	125682243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ENSMUSG00000027206.14_125684353_125701059_1	chr2	-	690	6	ISM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	0	10831	0	-10648	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACATTCCCTTACCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	125701059	125684352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ENSMUSG00000027207.16_125701068_125817215_1	chr2	+	1180	9	ISM	ENSMUSG00000027207.16	ENSMUST00000028636.13	2605	10	14	9004	14	-8292	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTGAGGCTGCACGC	NA	NA	NA	NA	NA	NA	NA	NA	125701067	125817215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_125701298_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179
ENSMUSG00000027207.16_125701189_125817257_1	chr2	+	1101	9	ISM	ENSMUSG00000027207.16	ENSMUST00000028636.13	2605	10	135	8962	135	-8250	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGATGCGCCAGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	125701188	125817257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_125701298_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179
ENSMUSG00000027207.16_125701236_125817315_1	chr2	+	1112	9	ISM	ENSMUSG00000027207.16	ENSMUST00000028636.13	2605	10	182	8904	182	-8192	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGCTGCCGGGACATGT	NA	NA	NA	NA	NA	NA	NA	NA	125701235	125817315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_125701298_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179
ENSMUSG00000027207.16_125729830_125825099_1	chr2	+	1106	8	ISM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	21803	408	21803	-408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATCCCGCCTGGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	125729829	125825099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
ENSMUSG00000027207.16_125738569_125825276_1	chr2	+	1110	6	ISM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	30542	231	30542	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGGTACGTTTGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	125738568	125825276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
ENSMUSG00000027207.16_125738648_125825342_1	chr2	+	1097	6	ISM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	30621	165	30621	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCACTTTTCTTTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	125738647	125825342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
ENSMUSG00000027207.16_125773214_125825569_1	chr2	+	1120	4	ISM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	65187	-62	65187	62	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTTCTGATATAGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	125773213	125825569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_125773326_125788703_125788915_125817179_125817382_125824974
ENSMUSG00000027207.16_125788740_125825723_1	chr2	+	1126	3	ISM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	80713	-216	80713	216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACACACAGTACACTTG	NA	NA	NA	NA	NA	NA	NA	NA	125788739	125825723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_125788915_125817179_125817382_125824974
ENSMUSG00000027207.16_125788813_125825818_1	chr2	+	1148	3	ISM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	80786	-311	80786	311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTTGAATTGACTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	125788812	125825818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_125788915_125817179_125817382_125824974
ENSMUSG00000027208.15_125930204_125931481_1	chr2	+	179	2	NNC	ENSMUSG00000027208.15	novel	227	2	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTACATGGTATTTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	125930203	125931481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_125930247_125931345
ENSMUSG00000027208.15_125930204_125931481_2	chr2	+	180	2	FSM	ENSMUSG00000027208.15	ENST00000514120.1	227	2	47	0	47	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTACATGGTATTTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	125930203	125931481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_125930259_125931356
ENSMUSG00000027209.18_125942880_125958051_1	chr2	-	204	2	ISM	ENSMUSG00000027209.18	ENST00000561064.5	440	5	8485	0	8485	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGTACCTGTGAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	125958051	125942879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_125942955_125957922
ENSMUSG00000027209.18_125958024_125965946_1	chr2	-	161	3	ISM	ENSMUSG00000027209.18	ENST00000561064.5	440	5	590	15144	590	-15144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTACACAACCTTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	125965946	125958023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_125958050_125962902_125963002_125965910
ENSMUSG00000027215.14_93249456_93250670_1	chr2	-	918	2	ISM	ENSMUSG00000027215.14	ENSMUST00000111257.8	1003	10	32354	-719	32354	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTCTGAAGAGGCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	93250670	93249455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93250288_93250584
ENSMUSG00000027215.14_93249599_93251073_1	chr2	-	947	3	ISM	ENSMUSG00000027215.14	ENSMUST00000111257.8	1003	10	31951	-576	31951	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAGGATCTGGACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	93251073	93249598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93250288_93250584_93250669_93250899
ENSMUSG00000027215.14_93249904_93260576_1	chr2	-	947	6	ISM	ENSMUSG00000027215.14	ENSMUST00000111257.8	1003	10	22448	-271	22448	271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCAGGGAGGGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	93260576	93249903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475
ENSMUSG00000027215.14_93250175_93292731_1	chr2	-	989	10	FSM	ENSMUSG00000027215.14	ENSMUST00000028644.11	1824	10	116	719	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCCTCCCATGGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	93292731	93250174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475_93260601_93264205_93264279_93267732_93267816_93273713_93273790_93292674
ENSMUSG00000027215.14_93250585_93292847_1	chr2	-	992	9	ISM	ENSMUSG00000027215.14	ENSMUST00000028644.11	1824	10	0	1129	0	-410	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCCCTCTCTCCCATG	NA	NA	NA	NA	NA	NA	NA	NA	93292847	93250584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475_93260601_93264205_93264279_93267732_93267816_93273713_93273790_93292674
ENSMUSG00000027220.3_92745443_92783772_1	chr2	+	1130	6	FSM	ENSMUSG00000027220.3	ENSMUST00000028648.3	3761	6	0	2631	0	-2631	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAGCACAAGATCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	92745442	92783772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_92745715_92771097_92771324_92773396_92773532_92776258_92776561_92781646_92781777_92783707
ENSMUSG00000027220.3_92771096_92783924_1	chr2	+	1012	5	ISM	ENSMUSG00000027220.3	ENSMUST00000028648.3	3761	6	25653	2479	25653	-2479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCGGGCTCTGAGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	92771095	92783924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_92771324_92773396_92773532_92776258_92776561_92781646_92781777_92783707
ENSMUSG00000027220.3_92771130_92783992_1	chr2	+	1046	5	ISM	ENSMUSG00000027220.3	ENSMUST00000028648.3	3761	6	25687	2411	25687	-2411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACCAACTGCACCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	92771129	92783992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_92771324_92773396_92773532_92776258_92776561_92781646_92781777_92783707
ENSMUSG00000027220.3_92771231_92784086_1	chr2	+	1039	5	ISM	ENSMUSG00000027220.3	ENSMUST00000028648.3	3761	6	25788	2317	25788	-2317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTGCTCTGTCCACATGC	NA	NA	NA	NA	NA	NA	NA	NA	92771230	92784086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_92771324_92773396_92773532_92776258_92776561_92781646_92781777_92783707
ENSMUSG00000027220.3_92773423_92784233_1	chr2	+	1067	4	ISM	ENSMUSG00000027220.3	ENSMUST00000028648.3	3761	6	27980	2170	27980	-2170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCATGCTCATCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	92773422	92784233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_92773532_92776258_92776561_92781646_92781777_92783707
ENSMUSG00000027220.3_92773497_92784263_1	chr2	+	1023	4	ISM	ENSMUSG00000027220.3	ENSMUST00000028648.3	3761	6	28054	2140	28054	-2140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTGCCAGGTACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	92773496	92784263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_92773532_92776258_92776561_92781646_92781777_92783707
ENSMUSG00000027220.3_92776321_92784368_1	chr2	+	1031	3	ISM	ENSMUSG00000027220.3	ENSMUST00000028648.3	3761	6	30878	2035	30878	-2035	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGATTCATAACAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	92776320	92784368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_92776561_92781646_92781777_92783707
ENSMUSG00000027220.3_92776437_92784482_1	chr2	+	1029	3	ISM	ENSMUSG00000027220.3	ENSMUST00000028648.3	3761	6	30994	1921	30994	-1921	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGAGAATCACTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	92776436	92784482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_92776561_92781646_92781777_92783707
ENSMUSG00000027220.3_92781645_92784661_1	chr2	+	1086	2	ISM	ENSMUSG00000027220.3	ENSMUST00000028648.3	3761	6	36202	1742	36202	-1742	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGGGGGCCCAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	92781644	92784661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_92781777_92783707
ENSMUSG00000027222.15_92205838_92211562_4	chr2	+	1205	11	FSM	ENSMUSG00000027222.15	ENSMUST00000028650.9	1392	11	187	0	187	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGGCTCTGTGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	92205837	92211562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_92206021_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
ENSMUSG00000027223.16_92214691_92223076_1	chr2	-	2604	12	FSM	ENSMUSG00000027223.16	ENSMUST00000111279.9	3274	12	0	670	0	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCCACTCTCTGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	92223076	92214690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319_92219626_92221380_92221487_92222501
ENSMUSG00000027223.16_92214697_92217982_1	chr2	-	1161	10	ISM	ENSMUSG00000027223.16	ENST00000574657.1	1444	11	1622	0	1622	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGCACCCCCACTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	92217982	92214696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217163_92217614_92217729_92217898
ENSMUSG00000027223.16_92214737_92219334_1	chr2	-	1134	11	FSM	ENSMUSG00000027223.16	ENST00000574657.1	1444	11	270	40	270	-40	multi-exon	FALSE	canonical	NA	NA	NA	NA	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTATACCTGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	92219334	92214736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217163_92217614_92217729_92217898_92217981_92219319
ENSMUSG00000027223.16_92215068_92219458_1	chr2	-	1229	10	ISM	ENSMUSG00000027223.16	ENST00000574657.1	1444	11	146	371	146	-371	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGTGTACGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	92219458	92215067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217163_92217614_92217729_92217898_92217981_92219319
ENSMUSG00000027227.8_122065230_122095319_1	chr2	+	1850	9	FSM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	0	502	0	-502	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAACACTGCTCATTCATG	NA	NA	NA	NA	NA	NA	NA	NA	122065229	122095319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_122065440_122076962_122076997_122079279_122079445_122083667_122083828_122087322_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
ENSMUSG00000027227.8_122065363_122095373_1	chr2	+	1771	9	FSM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	133	448	133	-448	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTCCCAACCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	122065362	122095373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_122065440_122076962_122076997_122079279_122079445_122083667_122083828_122087322_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
ENSMUSG00000027227.8_122079362_122095549_1	chr2	+	1754	7	ISM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	14132	272	14132	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGGATGGGTATCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	122079361	122095549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122079445_122083667_122083828_122087322_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
ENSMUSG00000027227.8_122079414_122095605_1	chr2	+	1758	7	ISM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	14184	216	14184	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCAAATCACACCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	122079413	122095605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122079445_122083667_122083828_122087322_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
ENSMUSG00000027227.8_122087323_122095821_1	chr2	+	1783	5	ISM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	22093	0	22093	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTATGTGGTTTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	122087322	122095821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
ENSMUSG00000027230.10_91812673_91822389_1	chr2	-	1611	8	ISM	ENSMUSG00000027230.10	ENSMUST00000028663.5	2603	12	32458	0	32458	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGACTCTGTGTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	91822389	91812672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91813353_91813509_91813778_91816505_91816633_91817380_91817481_91821051_91821121_91821253_91821313_91821470_91821621_91822231
ENSMUSG00000027230.10_91812922_91825763_1	chr2	-	1603	10	ISM	ENSMUSG00000027230.10	ENSMUST00000028663.5	2603	12	29084	249	29084	-249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCCCCTAAGATATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	91825763	91812921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91813353_91813509_91813778_91816505_91816633_91817380_91817481_91821051_91821121_91821253_91821313_91821470_91821621_91822231_91822390_91823615_91823695_91825601
ENSMUSG00000027230.10_91813281_91854406_1	chr2	-	1554	12	FSM	ENSMUSG00000027230.10	ENSMUST00000028663.5	2603	12	441	608	441	-608	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACCCAGAAGAGGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	91854406	91813280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_91813353_91813509_91813778_91816505_91816633_91817380_91817481_91821051_91821121_91821253_91821313_91821470_91821621_91822231_91822390_91823615_91823695_91825601_91825787_91832189_91832419_91854348
ENSMUSG00000027230.10_91813551_91854507_1	chr2	-	1542	11	ISM	ENSMUSG00000027230.10	ENSMUST00000028663.5	2603	12	340	878	340	-878	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCAACTTCTCCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	91854507	91813550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91813778_91816505_91816633_91817380_91817481_91821051_91821121_91821253_91821313_91821470_91821621_91822231_91822390_91823615_91823695_91825601_91825787_91832189_91832419_91854348
ENSMUSG00000027230.10_91816537_91854847_1	chr2	-	1624	10	ISM	ENSMUSG00000027230.10	ENSMUST00000028663.5	2603	12	0	3864	0	-3864	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGACAGTGTCTATGC	NA	NA	NA	NA	NA	NA	NA	NA	91854847	91816536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91816633_91817380_91817481_91821051_91821121_91821253_91821313_91821470_91821621_91822231_91822390_91823615_91823695_91825601_91825787_91832189_91832419_91854348
ENSMUSG00000027233.5_121951637_121955119_1	chr2	-	569	5	ISM	ENSMUSG00000027233.5	ENST00000682850.1	1165	10	1549	-2	1549	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCTTATATAAACAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	121955119	121951636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099
ENSMUSG00000027233.5_121951726_121955233_1	chr2	-	594	5	ISM	ENSMUSG00000027233.5	ENST00000682850.1	1165	10	1435	87	1435	-87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGCCTTCCCCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	121955233	121951725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099
ENSMUSG00000027233.5_121951772_121955360_1	chr2	-	581	6	ISM	ENSMUSG00000027233.5	ENST00000682850.1	1165	10	1308	133	1308	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCCTGGGAGATAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	121955360	121951771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327
ENSMUSG00000027233.5_121952309_121955607_1	chr2	-	585	6	ISM	ENSMUSG00000027233.5	ENST00000682850.1	1165	10	1061	670	1061	-670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGATCCTTCCCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	121955607	121952308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562
ENSMUSG00000027233.5_121954202_121955777_1	chr2	-	611	6	ISM	ENSMUSG00000027233.5	ENST00000682850.1	1165	10	891	2563	891	-2563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTAATATACTTGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	121955777	121954201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750
ENSMUSG00000027233.5_121954324_121955871_1	chr2	-	583	6	ISM	ENSMUSG00000027233.5	ENST00000682850.1	1165	10	797	2685	797	-2685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACCTCTGGGGAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	121955871	121954323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750
ENSMUSG00000027233.5_121954824_121956229_1	chr2	-	590	6	ISM	ENSMUSG00000027233.5	ENST00000682850.1	1165	10	439	3185	439	-3185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAGGTGCTGTGGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	121956229	121954823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199
ENSMUSG00000027233.5_121954886_121956275_1	chr2	-	574	6	ISM	ENSMUSG00000027233.5	ENST00000682850.1	1165	10	393	3247	393	-3247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTAGCCTCCTCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	121956275	121954885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199
ENSMUSG00000027233.5_121954939_121956341_1	chr2	-	587	6	ISM	ENSMUSG00000027233.5	ENST00000682850.1	1165	10	327	3300	327	-3300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGGGAAAGTTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	121956341	121954938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199
ENSMUSG00000027233.5_121955115_121956639_1	chr2	-	574	6	ISM	ENSMUSG00000027233.5	ENST00000682850.1	1165	10	29	3476	29	-3476	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAACAACCTGGAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	121956639	121955114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199_121956354_121956611
ENSMUSG00000027236.9_121859123_121883930_1	chr2	+	2168	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	96	3149	-20	1049	multi-exon	FALSE	canonical	NA	NA	NA	NA	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACACAGCAATAACTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	121859122	121883930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ENSMUSG00000027236.9_121859133_121882551_1	chr2	+	617	7	FSM	ENSMUSG00000027236.9	ENST00000535391.5	937	7	-10	330	-10	-330	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACAAGACTATGAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	121859132	121882551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121882222_121882297_121882447
ENSMUSG00000027236.9_121859365_121882714_1	chr2	+	631	6	ISM	ENSMUSG00000027236.9	ENST00000535391.5	937	7	222	167	222	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGGTGCTAATGTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	121859364	121882714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121882222_121882297_121882447
ENSMUSG00000027236.9_121859373_121884118_1	chr2	+	2189	7	ISM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	346	2961	230	1237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACAGGCGTTCTTTAACC	NA	NA	NA	NA	NA	NA	NA	NA	121859372	121884118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ENSMUSG00000027236.9_121872085_121882775_1	chr2	+	582	4	NNC	ENSMUSG00000027236.9	novel	937	7	NA	NA	12942	-106	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTCAGTTGCTACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	121872084	121882775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_121872155_121877916_121878032_121882222_121882297_121882452
ENSMUSG00000027236.9_121872103_121884230_1	chr2	+	2186	5	ISM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	13076	2849	12960	1349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCAGTATGGTATATTTC	NA	NA	NA	NA	NA	NA	NA	NA	121872102	121884230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ENSMUSG00000027236.9_121877934_121882881_1	chr2	+	601	3	NNC	ENSMUSG00000027236.9	novel	937	7	NA	NA	18791	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTTGCAACATGACAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	121877933	121882881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_121878032_121882222_121882297_121882452
ENSMUSG00000027236.9_121881017_121884429_1	chr2	+	2169	3	ISM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	21990	2650	21874	1548	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTGTGTTCATATG	NA	NA	NA	NA	NA	NA	NA	NA	121881016	121884429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121881130_121882222_121882297_121882447
ENSMUSG00000027236.9_121881081_121884505_1	chr2	+	2181	3	ISM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	22054	2574	21938	1624	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGACCCTGTCGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	121881080	121884505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121881130_121882222_121882297_121882447
ENSMUSG00000027239.15_91760150_91761326_1	chr2	-	470	2	NNC	ENSMUSG00000027239.15	novel	771	5	NA	NA	707	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGCCCCTTCCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	91761326	91760149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_91760456_91761162
ENSMUSG00000027239.15_91760150_91761326_2	chr2	-	475	2	ISM	ENSMUSG00000027239.15	ENSMUST00000111309.8	771	5	707	0	707	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGCCCCTTCCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	91761326	91760149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91760461_91761162
ENSMUSG00000027239.15_91760311_91762082_1	chr2	-	433	4	FSM	ENSMUSG00000027239.15	ENST00000395569.8	638	4	43	162	-38	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTCACGCCCACACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	91762082	91760310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_91760461_91761162_91761325_91761716_91761794_91762038
ENSMUSG00000027239.15_91760311_91762125_1	chr2	-	476	4	FSM	ENSMUSG00000027239.15	ENST00000395569.8	638	4	0	162	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTCACGCCCACACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	91762125	91760310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_91760461_91761162_91761325_91761716_91761794_91762038
ENSMUSG00000027243.9_91541267_91551307_1	chr2	+	1725	3	FSM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	0	583	0	-583	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCACTAGTTGTAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	91541266	91551307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_91541597_91542424_91543211_91550698
ENSMUSG00000027243.9_91541440_91551436_1	chr2	+	1681	3	FSM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	173	454	173	-454	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTAGTTTGTGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	91541439	91551436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_91541597_91542424_91543211_91550698
ENSMUSG00000027243.9_91542540_91551701_1	chr2	+	1674	2	ISM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	1273	189	0	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCTAGAACTGAAAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	91542539	91551701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91543211_91550698
ENSMUSG00000027243.9_91542540_91551770_1	chr2	+	1743	2	ISM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	1273	120	0	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGACTGCTCTTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	91542539	91551770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91543211_91550698
ENSMUSG00000027243.9_91542722_91551890_1	chr2	+	1681	2	ISM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	1455	0	182	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	91542721	91551890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91543211_91550698
ENSMUSG00000027244.15_91504963_91509774_1	chr2	-	2092	3	ISM	ENSMUSG00000027244.15	ENSMUST00000028678.9	3604	17	31090	-1	31090	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCTATTCCAAATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	91509774	91504962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91506809_91509071_91509201_91509657
ENSMUSG00000027244.15_91505908_91513249_1	chr2	-	1690	8	ISM	ENSMUSG00000027244.15	ENST00000683050.1	2834	18	27648	0	27615	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGGCCTCCCGTGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	91513249	91505907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91513147
ENSMUSG00000027244.15_91506129_91516225_1	chr2	-	1755	11	ISM	ENSMUSG00000027244.15	ENST00000683050.1	2834	18	24672	221	24639	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAAAGCTAGCCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	91516225	91506128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91513147_91513247_91515013_91515105_91515495_91515595_91516126
ENSMUSG00000027244.15_91506277_91516871_1	chr2	-	1631	12	ISM	ENSMUSG00000027244.15	ENST00000683050.1	2834	18	24026	369	23993	250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGACCACCCCACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	91516871	91506276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91513147_91513247_91515013_91515105_91515495_91515595_91516126_91516224_91516845
ENSMUSG00000027244.15_91506407_91515597_1	chr2	-	1171	8	ISM	ENSMUSG00000027244.15	ENST00000530500.5	1881	15	25300	-120	25267	120	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCCCCTACCTGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	91515597	91506406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495
ENSMUSG00000027244.15_91506407_91520189_1	chr2	-	1711	14	ISM	ENSMUSG00000027244.15	ENST00000683050.1	2834	18	20708	499	20675	120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCCCCTACCTGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	91520189	91506406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91513147_91513247_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135
ENSMUSG00000027244.15_91506407_91540864_1	chr2	-	2050	16	FSM	ENSMUSG00000027244.15	ENSMUST00000076803.12	3551	16	57	1444	0	120	multi-exon	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCCCCTACCTGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	91540864	91506406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ENSMUSG00000027244.15_91506527_91516891_1	chr2	-	1191	10	ISM	ENSMUSG00000027244.15	ENST00000530500.5	1881	15	24006	0	23973	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCGTCGAGCTGGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	91516891	91506526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845
ENSMUSG00000027244.15_91506527_91522893_1	chr2	-	1705	15	ISM	ENSMUSG00000027244.15	ENST00000683050.1	2834	18	18004	619	17971	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCGTCGAGCTGGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	91522893	91506526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91513147_91513247_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772
ENSMUSG00000027244.15_91506663_91520182_1	chr2	-	1238	12	ISM	ENSMUSG00000027244.15	ENST00000530500.5	1881	15	20715	136	20682	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTAGCCTTCATGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	91520182	91506662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135
ENSMUSG00000027244.15_91506663_91526285_1	chr2	-	1672	17	ISM	ENSMUSG00000027244.15	ENST00000683050.1	2834	18	14612	755	14579	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTAGCCTTCATGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	91526285	91506662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91513147_91513247_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262
ENSMUSG00000027244.15_91506663_91526325_1	chr2	-	1712	17	ISM	ENSMUSG00000027244.15	ENST00000683050.1	2834	18	14572	755	14539	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTAGCCTTCATGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	91526325	91506662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91513147_91513247_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262
ENSMUSG00000027244.15_91506785_91526372_1	chr2	-	1637	17	ISM	ENSMUSG00000027244.15	ENST00000683050.1	2834	18	14525	877	14492	-258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATGAGAAGAATGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	91526372	91506784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91513147_91513247_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262
ENSMUSG00000027244.15_91509071_91522892_1	chr2	-	1213	12	ISM	ENSMUSG00000027244.15	ENST00000530500.5	1881	15	18005	2544	17972	-2544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAACCCCTTCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	91522892	91509070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772
ENSMUSG00000027244.15_91509121_91540657_1	chr2	-	1644	17	ISM	ENSMUSG00000027244.15	ENST00000683050.1	2834	18	240	3213	207	-2594	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGCCTCTCCATAGATT	NA	NA	NA	NA	NA	NA	NA	NA	91540657	91509120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91513147_91513247_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526387_91540591
ENSMUSG00000027244.15_91509178_91540719_1	chr2	-	1649	17	ISM	ENSMUSG00000027244.15	ENST00000683050.1	2834	18	178	3270	145	-2651	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTCCAATGGACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	91540719	91509177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91513147_91513247_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526387_91540591
ENSMUSG00000027244.15_91509732_91526338_1	chr2	-	1166	13	ISM	ENSMUSG00000027244.15	ENST00000524625.5	2610	16	14545	3824	14526	-3205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCTGCACTCAGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	91526338	91509731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262
ENSMUSG00000027244.15_91509732_91540864_1	chr2	-	1697	16	ISM	ENSMUSG00000027244.15	ENST00000683050.1	2834	18	33	3824	0	-3205	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCTGCACTCAGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	91540864	91509731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91513147_91513247_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526387_91540591
ENSMUSG00000027244.15_91510688_91540628_1	chr2	-	1130	12	ISM	ENSMUSG00000027244.15	ENST00000524625.5	2610	16	255	4780	236	-4161	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTCCTTCTGCCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	91540628	91510687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526387_91540591
ENSMUSG00000027244.15_91510735_91540690_1	chr2	-	1145	12	ISM	ENSMUSG00000027244.15	ENST00000524625.5	2610	16	193	4827	174	-4208	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTCCGAAAAGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	91540690	91510734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526387_91540591
ENSMUSG00000027244.15_91510770_91540756_1	chr2	-	1176	12	ISM	ENSMUSG00000027244.15	ENST00000524625.5	2610	16	127	4862	108	-4243	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGGGCCTCACCCCATG	NA	NA	NA	NA	NA	NA	NA	NA	91540756	91510769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526387_91540591
ENSMUSG00000027244.15_91511899_91540864_1	chr2	-	1256	11	ISM	ENSMUSG00000027244.15	ENST00000524625.5	2610	16	19	5991	0	-5372	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGAGTCATGGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	91540864	91511898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526387_91540591
ENSMUSG00000027244.15_91520134_91540713_1	chr2	-	372	4	ISM	ENSMUSG00000027244.15	ENST00000530500.5	1881	15	184	13607	151	-13607	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTCTGTGTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	91540713	91520133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91520183_91522772_91522893_91524269_91524351_91540591
ENSMUSG00000027244.15_91522862_91540864_1	chr2	-	385	3	ISM	ENSMUSG00000027244.15	ENST00000530500.5	1881	15	33	16335	0	-16335	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACCCATGAAGCAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	91540864	91522861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91522893_91524269_91524351_91540591
ENSMUSG00000027245.12_121286406_121287641_1	chr2	+	934	2	ISM	ENSMUSG00000027245.12	ENSMUST00000110612.8	4170	5	2635	1350	-1038	-1085	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGACCGAGACCAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	121286405	121287641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121287188_121287489
ENSMUSG00000027245.12_121286464_121287692_1	chr2	+	927	2	ISM	ENSMUSG00000027245.12	ENSMUST00000110612.8	4170	5	2693	1299	-980	-1034	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACAGTGGTGCTGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	121286463	121287692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121287188_121287489
ENSMUSG00000027245.12_121286643_121288506_1	chr2	+	918	4	ISM	ENSMUSG00000027245.12	ENSMUST00000110612.8	4170	5	2872	485	-801	-220	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATCTGGAGTTGATAGT	NA	NA	NA	NA	NA	NA	NA	NA	121286642	121288506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121287188_121287489_121287773_121288126_121288183_121288472
ENSMUSG00000027245.12_121287036_121288991_1	chr2	+	905	5	FSM	ENSMUSG00000027245.12	ENSMUST00000110612.8	4170	5	3265	0	-408	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTGCCCTTTTCTACC	NA	NA	NA	NA	NA	NA	NA	NA	121287035	121288991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_121287188_121287489_121287773_121288126_121288183_121288472_121288525_121288629
ENSMUSG00000027245.12_121287444_121289153_1	chr2	+	954	4	NNC	ENSMUSG00000027245.12	novel	961	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTTCCCCTTGGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	121287443	121289153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_121287773_121288126_121288183_121288479_121288525_121288629
ENSMUSG00000027245.12_121287752_121288618_1	chr2	+	167	2	FSM	ENSMUSG00000027245.12	ENST00000458412.2	440	2	165	108	165	-108	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTTGCAGATGACGGAA	NA	NA	NA	NA	NA	NA	NA	NA	121287751	121288618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_121287773_121288472
ENSMUSG00000027247.17_91480567_91484876_1	chr2	+	322	4	ISM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	362	17795	0	-16760	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCATGCCCTGTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	91480566	91484876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780
ENSMUSG00000027247.17_91480567_91501392_1	chr2	+	1523	13	FSM	ENSMUSG00000027247.17	ENST00000311956.9	1796	13	29	244	0	-244	multi-exon	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCCTCTGCCCGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	91480566	91501392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_91480598_91484394_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUSG00000027247.17_91482092_91492705_1	chr2	+	371	4	ISM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	1887	9966	-1461	-8931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGACCACAGCAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	91482091	91492705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91482169_91484417_91484553_91484780_91484877_91492642
ENSMUSG00000027247.17_91484393_91501392_1	chr2	+	1494	12	ISM	ENSMUSG00000027247.17	ENSMUST00000111330.3	3068	13	840	1255	840	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCCTCTGCCCGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	91484392	91501392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUSG00000027247.17_91492671_91501514_1	chr2	+	1332	10	ISM	ENSMUSG00000027247.17	ENSMUST00000111330.3	3068	13	9118	1133	9118	-122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGTAAACCTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	91492670	91501514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUSG00000027247.17_91498541_91501706_1	chr2	+	1465	9	ISM	ENSMUSG00000027247.17	ENSMUST00000111330.3	3068	13	14988	941	14988	70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTCTGCCTCCTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	91498540	91501706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUSG00000027248.14_121244364_121253011_1	chr2	+	405	2	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	108	16157	108	-16157	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCGGTGTGTTCACGAG	NA	NA	NA	NA	NA	NA	NA	NA	121244363	121253011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121244687_121252929
ENSMUSG00000027248.14_121244469_121255123_1	chr2	+	415	3	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	213	14045	213	-14045	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGATCCTGGATTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	121244468	121255123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121244687_121252929_121253009_121255005
ENSMUSG00000027248.14_121255111_121262249_1	chr2	+	368	4	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	10855	6919	10855	-6919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTATCCCTGGTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	121255110	121262249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121255124_121257075_121257184_121259934_121260065_121262132
ENSMUSG00000027248.14_121257075_121262809_1	chr2	+	411	4	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	12819	6359	12819	-6359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTACTCACCGCTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	121257074	121262809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121257184_121259934_121260065_121262132_121262250_121262754
ENSMUSG00000027248.14_121259935_121264011_1	chr2	+	387	4	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	15679	5157	15679	-5157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGAAATTCCTTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	121259934	121264011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121260065_121262132_121262250_121262754_121262881_121263997
ENSMUSG00000027248.14_121260003_121264051_1	chr2	+	359	4	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	15747	5117	15747	-5117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGCTAGCCGTAAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	121260002	121264051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121260065_121262132_121262250_121262754_121262881_121263997
ENSMUSG00000027248.14_121262855_121265315_1	chr2	+	364	4	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	18599	3853	18599	-3853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGTGCTGATTGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	121262854	121265315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121262881_121263997_121264181_121264465_121264575_121265269
ENSMUSG00000027248.14_121264122_121266481_1	chr2	+	377	4	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	19866	2687	19866	-2687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGATTAGAGGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	121264121	121266481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121264181_121264465_121264575_121265269_121265399_121266401
ENSMUSG00000027248.14_121264122_121266895_1	chr2	+	435	5	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	19866	2273	19866	-2273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTGTTGTCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	121264121	121266895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837
ENSMUSG00000027248.14_121264466_121268083_1	chr2	+	393	5	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	20210	1085	20210	-1085	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTATTAGCTATCTAC	NA	NA	NA	NA	NA	NA	NA	NA	121264465	121268083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ENSMUSG00000027248.14_121264528_121268123_1	chr2	+	371	5	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	20272	1045	20272	-1045	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTATAATTCAAGAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	121264527	121268123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ENSMUSG00000027255.15_91095319_91105266_1	chr2	+	1688	13	ISM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	0	2010	0	-1991	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTGAAGTTGTCTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	91095318	91105266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139
ENSMUSG00000027255.15_91095432_91105472_1	chr2	+	1630	14	ISM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	113	1804	32	-1785	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACCTTTTTGGAAACATG	NA	NA	NA	NA	NA	NA	NA	NA	91095431	91105472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417
ENSMUSG00000027255.15_91095638_91106155_1	chr2	+	1628	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	319	1121	0	-1102	multi-exon	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGACGACAGCAAGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	91095637	91106155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ENSMUSG00000027255.15_91095638_91106195_1	chr2	+	1668	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	319	1081	0	-1062	multi-exon	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCTTGTGGGTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	91095637	91106195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ENSMUSG00000027255.15_91095679_91098817_1	chr2	+	498	6	ISM	ENSMUSG00000027255.15	ENST00000426335.6	2887	15	279	8440	41	-8440	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATCTGCTCGGAACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	91095678	91098817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91098501_91098584_91098796
ENSMUSG00000027255.15_91095679_91106248_1	chr2	+	1680	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	360	1028	41	-1009	multi-exon	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGACTTGGGAGGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	91095678	91106248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ENSMUSG00000027255.15_91095971_91104185_1	chr2	+	1071	12	ISM	ENSMUSG00000027255.15	ENSMUST00000028691.7	2791	17	333	3091	333	-3072	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAACCTGAAGTTACCAT	NA	NA	NA	NA	NA	NA	NA	NA	91095970	91104185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099414_91099457_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097
ENSMUSG00000027255.15_91095994_91100346_1	chr2	+	508	7	ISM	ENSMUSG00000027255.15	ENST00000426335.6	2887	15	594	6911	356	-6911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGGTGGCAGAGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	91095993	91100346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91096036_91096570_91096644_91097469_91097602_91098501_91098584_91098796_91098854_91099796_91099850_91100277
ENSMUSG00000027255.15_91096000_91106403_1	chr2	+	1681	15	ISM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	681	873	362	-854	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGGAGTGAGGGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	91095999	91106403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ENSMUSG00000027255.15_91097518_91100574_1	chr2	+	485	6	ISM	ENSMUSG00000027255.15	ENST00000426335.6	2887	15	2118	6683	1880	-6683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGAAGGAAAGAAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	91097517	91100574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91097602_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502
ENSMUSG00000027255.15_91097553_91106576_1	chr2	+	1662	13	ISM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	2234	700	1915	-681	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGGGAGAAGTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	91097552	91106576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ENSMUSG00000027255.15_91097564_91100633_1	chr2	+	498	6	ISM	ENSMUSG00000027255.15	ENST00000426335.6	2887	15	2164	6624	1926	-6624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGAGGCTCGGGCCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	91097563	91100633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91097602_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502
ENSMUSG00000027255.15_91100368_91106960_1	chr2	+	1634	8	ISM	ENSMUSG00000027255.15	ENSMUST00000028691.7	2791	17	4730	316	4730	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTTATCATCTGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	91100367	91106960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ENSMUSG00000027255.15_91100593_91107110_1	chr2	+	1647	7	ISM	ENSMUSG00000027255.15	ENSMUST00000028691.7	2791	17	4955	166	4955	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGTCTGGCCCAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	91100592	91107110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ENSMUSG00000027255.15_91103925_91107276_1	chr2	+	1732	6	ISM	ENSMUSG00000027255.15	ENSMUST00000028691.7	2791	17	8287	0	8287	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTCCGTCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	91103924	91107276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ENSMUSG00000027257.14_91090565_91091919_1	chr2	+	499	4	ISM	ENSMUSG00000027257.14	ENST00000298838.11	1473	9	52	2893	52	-2893	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCCACGCGAAGGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	91090564	91091919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91090607_91090748_91090906_91091515_91091752_91091855
ENSMUSG00000027257.14_91090834_91093172_1	chr2	+	524	4	ISM	ENSMUSG00000027257.14	ENST00000298838.11	1473	9	321	1640	321	-1640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACATGGAGCAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	91090833	91093172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91090906_91091515_91091752_91091855_91092012_91093112
ENSMUSG00000027257.14_91091607_91093425_1	chr2	+	499	4	ISM	ENSMUSG00000027257.14	ENST00000298838.11	1473	9	1094	1387	1094	-1387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGCAGAGCATTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	91091606	91093425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91091752_91091855_91092012_91093112_91093289_91093403
ENSMUSG00000027257.14_91091651_91093483_1	chr2	+	513	4	ISM	ENSMUSG00000027257.14	ENST00000298838.11	1473	9	1138	1329	1138	-1329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACGGGCCTGGCATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	91091650	91093483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91091752_91091855_91092012_91093112_91093289_91093403
ENSMUSG00000027257.14_91091711_91093524_1	chr2	+	494	4	ISM	ENSMUSG00000027257.14	ENST00000298838.11	1473	9	1198	1288	1198	-1288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTCTTAGAGGCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	91091710	91093524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91091752_91091855_91092012_91093112_91093289_91093403
ENSMUSG00000027257.14_91091854_91093768_1	chr2	+	592	4	ISM	ENSMUSG00000027257.14	ENST00000298838.11	1473	9	1341	1044	1341	-1044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGCCGGGATCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	91091853	91093768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91092012_91093112_91093289_91093403_91093525_91093631
ENSMUSG00000027257.14_91093258_91094602_1	chr2	+	478	5	ISM	ENSMUSG00000027257.14	ENSMUST00000111349.9	1993	11	5584	422	2745	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCATTGGTCTGTACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	91093257	91094602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
ENSMUSG00000027257.14_91093451_91094704_1	chr2	+	502	4	ISM	ENSMUSG00000027257.14	ENSMUST00000111349.9	1993	11	5777	320	2938	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGACTGCTGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	91093450	91094704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91093525_91093631_91093769_91094109_91094232_91094535
ENSMUSG00000027257.14_91093630_91094813_1	chr2	+	539	3	ISM	ENSMUSG00000027257.14	ENSMUST00000111349.9	1993	11	5956	211	3117	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAGGTTGGAATGATGG	NA	NA	NA	NA	NA	NA	NA	NA	91093629	91094813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91093769_91094109_91094232_91094535
ENSMUSG00000027259.16_120973019_120985837_1	chr2	+	737	8	FSM	ENSMUSG00000027259.16	ENST00000422466.6	947	8	15	195	15	-195	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACATACCTTTCTCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	120973018	120985837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120982910_120983050_120985199_120985301_120985815
ENSMUSG00000027259.16_120973064_120985893_1	chr2	+	748	8	FSM	ENSMUSG00000027259.16	ENST00000422466.6	947	8	60	139	60	-139	multi-exon	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTGTGGGATCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	120973063	120985893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120982910_120983050_120985199_120985301_120985815
ENSMUSG00000027259.16_120973094_120985909_1	chr2	+	729	8	NNC	ENSMUSG00000027259.16	novel	947	8	NA	NA	90	-123	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCTATGAATCCATCAAC	NA	NA	NA	NA	NA	NA	NA	NA	120973093	120985909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_120973136_120973629_120973691_120976513_120976602_120978721_120978799_120980700_120980828_120982910_120983050_120985199_120985301_120985815
ENSMUSG00000027259.16_120973114_120985944_1	chr2	+	749	8	FSM	ENSMUSG00000027259.16	ENST00000422466.6	947	8	110	88	110	-88	multi-exon	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAACACCAGATCTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	120973113	120985944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120982910_120983050_120985199_120985301_120985815
ENSMUSG00000027259.16_120973630_120986070_1	chr2	+	853	7	ISM	ENSMUSG00000027259.16	ENST00000422466.6	947	8	626	-38	626	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTACTGCCCACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	120973629	120986070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120982910_120983050_120985199_120985301_120985815
ENSMUSG00000027259.16_120973630_120986070_2	chr2	+	852	7	NNC	ENSMUSG00000027259.16	novel	947	8	NA	NA	626	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTACTGCCCACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	120973629	120986070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120982910_120983050_120985200_120985301_120985815
ENSMUSG00000027263.13_121001721_121027388_1	chr2	+	2318	18	FSM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	25	1863	25	-1862	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCTGATATCCCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	121001720	121027388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ENSMUSG00000027263.13_121004132_121027649_1	chr2	+	2254	17	ISM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	2436	1602	2383	-1601	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCTTCCCTAAAATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	121004131	121027649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ENSMUSG00000027263.13_121009174_121027995_1	chr2	+	2307	13	ISM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	7478	1256	7425	-1255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACACTGTCTACCAACCAC	NA	NA	NA	NA	NA	NA	NA	NA	121009173	121027995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ENSMUSG00000027263.13_121015242_121028482_1	chr2	+	2310	10	ISM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	13546	769	13493	-768	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTCAACTTTAGCACTAC	NA	NA	NA	NA	NA	NA	NA	NA	121015241	121028482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ENSMUSG00000027263.13_121020304_121028798_1	chr2	+	2296	6	ISM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	18608	453	18555	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTCCATGCAAAGAATACAA	NA	NA	NA	NA	NA	NA	NA	NA	121020303	121028798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ENSMUSG00000027263.13_121020354_121028857_1	chr2	+	2305	6	ISM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	18658	394	18605	-393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCACAATAGCAGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	121020353	121028857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ENSMUSG00000027263.13_121024441_121029250_1	chr2	+	2409	4	ISM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	22745	1	22692	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGCCTTGTAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	121024440	121029250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121024558_121025890_121026008_121026583_121026724_121027215
ENSMUSG00000027282.18_90677534_90695915_1	chr2	+	1315	12	NNC	ENSMUSG00000027282.18	novel	2281	12	NA	NA	35	-1069	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCTTTGTCAAATGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	90677533	90695915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_90677730_90679714_90679800_90679941_90680069_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027282.18_90677575_90695897_1	chr2	+	1263	13	FSM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	76	1257	0	-1087	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGAGTCTCAGGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	90677574	90695897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027282.18_90677617_90695970_1	chr2	+	1294	13	FSM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	118	1184	0	-1014	multi-exon	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGATAAAATTAAGAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	90677616	90695970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027282.18_90677631_90696012_1	chr2	+	1322	13	FSM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	132	1142	14	-972	multi-exon	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGAGTAGACAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	90677630	90696012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027282.18_90679713_90696131_1	chr2	+	1337	11	NNC	ENSMUSG00000027282.18	novel	2281	12	NA	NA	2096	-853	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTCCTACAGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	90679712	90696131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_90679800_90679941_90680069_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027282.18_90679713_90696131_3	chr2	+	1344	12	ISM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	2214	1023	2096	-853	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTCCTACAGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	90679712	90696131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027282.18_90679941_90696241_2	chr2	+	1368	11	ISM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	2442	913	2324	-743	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTCCTAGCCTCGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	90679940	90696241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027282.18_90683393_90696395_1	chr2	+	1389	9	ISM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	5776	589	5776	-589	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCAGAAGGTGAGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	90683392	90696395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027282.18_90685266_90696395_1	chr2	+	1326	8	ISM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	7649	589	7649	-589	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCAGAAGGTGAGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	90685265	90696395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027282.18_90689820_90696641_1	chr2	+	1400	5	ISM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	12203	343	12203	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAGATGAGAAAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	90689819	90696641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027282.18_90690806_90696641_1	chr2	+	1307	4	ISM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	13189	343	13189	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAGATGAGAAAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	90690805	90696641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027285.14_120439980_120449757_1	chr2	+	659	5	NNC	ENSMUSG00000027285.14	novel	711	5	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGGAATAGTGGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	120439979	120449757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_120440027_120443531_120443602_120446335_120446469_120448353_120448463_120449457
ENSMUSG00000027285.14_120439980_120449757_2	chr2	+	660	5	NNC	ENSMUSG00000027285.14	novel	711	5	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGGAATAGTGGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	120439979	120449757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_120440027_120443531_120443602_120446336_120446469_120448353_120448463_120449455
ENSMUSG00000027285.14_120439980_120449757_3	chr2	+	659	5	NNC	ENSMUSG00000027285.14	novel	711	5	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGGAATAGTGGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	120439979	120449757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_120440027_120443531_120443602_120446335_120446469_120448355_120448463_120449455
ENSMUSG00000027285.14_120439980_120449757_4	chr2	+	661	5	FSM	ENSMUSG00000027285.14	ENST00000568876.5	711	5	50	0	50	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGGAATAGTGGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	120439979	120449757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_120440027_120443531_120443602_120446335_120446469_120448353_120448463_120449455
ENSMUSG00000027287.15_120398178_120425409_1	chr2	+	544	6	ISM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	26	6327	0	3754	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGCCAGTGGTGGATAC	NA	NA	NA	NA	NA	NA	NA	NA	120398177	120425409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281
ENSMUSG00000027287.15_120414780_120427199_1	chr2	+	508	6	ISM	ENSMUSG00000027287.15	ENSMUST00000028743.10	2658	8	16608	4537	-850	-2623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGCTCTGGATATGGG	NA	NA	NA	NA	NA	NA	NA	NA	120414779	120427199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123
ENSMUSG00000027287.15_120415641_120421342_1	chr2	+	240	4	FSM	ENSMUSG00000027287.15	ENST00000567094.5	564	4	11	313	11	-313	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGATGCAGTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	120415640	120421342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_120415674_120416036_120416086_120416639_120416758_120421302
ENSMUSG00000027287.15_120415654_120427186_1	chr2	+	250	4	ISM	ENSMUSG00000027287.15	ENST00000397138.5	422	5	24	2636	24	-2636	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCAACCTAAAGAACATGG	NA	NA	NA	NA	NA	NA	NA	NA	120415653	120427186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120415674_120416036_120416086_120416639_120416758_120427123
ENSMUSG00000027287.15_120416722_120421415_1	chr2	+	149	2	ISM	ENSMUSG00000027287.15	ENST00000567094.5	564	4	1092	240	1092	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCATGTGCATGGATT	NA	NA	NA	NA	NA	NA	NA	NA	120416721	120421415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120416758_120421302
ENSMUSG00000027287.15_120416722_120421482_1	chr2	+	216	2	ISM	ENSMUSG00000027287.15	ENST00000567094.5	564	4	1092	173	1092	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATTTGTTCGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	120416721	120421482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120416758_120421302
ENSMUSG00000027287.15_120416722_120421526_1	chr2	+	260	2	ISM	ENSMUSG00000027287.15	ENST00000567094.5	564	4	1092	129	1092	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAAAGGATCTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	120416721	120421526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120416758_120421302
ENSMUSG00000027287.15_120416722_120429823_1	chr2	+	248	3	ISM	ENSMUSG00000027287.15	ENST00000397138.5	422	5	1092	-1	1092	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTGTACTTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	120416721	120429823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120416758_120427123_120427269_120429756
ENSMUSG00000027287.15_120425316_120429995_1	chr2	+	506	3	ISM	ENSMUSG00000027287.15	ENSMUST00000116437.8	2730	9	27138	1741	9686	173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTCATAGGCTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	120425315	120429995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120425438_120427123_120427269_120429756
ENSMUSG00000027287.15_120425330_120431631_1	chr2	+	2128	3	ISM	ENSMUSG00000027287.15	ENSMUST00000116437.8	2730	9	27152	105	9700	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAACCCCTTTGCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	120425329	120431631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120425438_120427123_120427269_120429756
ENSMUSG00000027287.15_120427120_120431736_1	chr2	+	2129	2	ISM	ENSMUSG00000027287.15	ENST00000397138.5	422	5	11490	-1914	11490	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGACCAGTAATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	120427119	120431736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120427269_120429756
ENSMUSG00000027288.17_120337301_120354620_1	chr2	-	4715	12	ISM	ENSMUSG00000027288.17	ENST00000565611.5	3961	18	15702	-2780	15702	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTATTTGTCTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	120354620	120337300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345
ENSMUSG00000027288.17_120338121_120357565_1	chr2	-	4716	13	ISM	ENSMUSG00000027288.17	ENST00000565611.5	3961	18	12757	-1960	12757	-820	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTCATGAACACATAACA	NA	NA	NA	NA	NA	NA	NA	NA	120357565	120338120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229
ENSMUSG00000027288.17_120340095_120346474_1	chr2	-	1083	7	ISM	ENSMUSG00000027288.17	ENST00000565611.5	3961	18	23848	14	23848	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTGCAGTGTCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	120346474	120340094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394
ENSMUSG00000027288.17_120340250_120365202_1	chr2	-	4712	18	ISM	ENSMUSG00000027288.17	ENSMUST00000171215.8	6391	19	5139	155	5120	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	696	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTGACCCTAATCATACA	NA	NA	NA	NA	NA	NA	NA	NA	120365202	120340249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991
ENSMUSG00000027288.17_120340527_120365494_1	chr2	-	4727	18	ISM	ENSMUSG00000027288.17	ENSMUST00000171215.8	6391	19	4847	432	4828	-432	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCCATGGGCCGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	120365494	120340526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991
ENSMUSG00000027288.17_120344642_120370169_1	chr2	-	2956	14	ISM	ENSMUSG00000027288.17	ENST00000565611.5	3961	18	153	4561	153	-4547	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTCTATGAGTTACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	120370169	120344641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120370031
ENSMUSG00000027288.17_120345955_120370341_1	chr2	-	2994	13	ISM	ENSMUSG00000027288.17	ENST00000565611.5	3961	18	-19	5874	0	-5860	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGACCAGTCGGTGCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	120370341	120345954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120370031
ENSMUSG00000027288.17_120349627_120355100_1	chr2	-	1125	5	ISM	ENSMUSG00000027288.17	ENST00000565611.5	3961	18	15222	9546	15222	-9532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCCTCTGCCTTCATAA	NA	NA	NA	NA	NA	NA	NA	NA	120355100	120349626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345
ENSMUSG00000027288.17_120357477_120376365_1	chr2	-	1045	6	ISM	ENSMUSG00000027288.17	ENST00000565380.5	3932	20	17917	17396	-6024	-17382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACAGCTCTGCTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	120376365	120357476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323
ENSMUSG00000027288.17_120358821_120385796_1	chr2	-	1058	6	ISM	ENSMUSG00000027288.17	ENST00000565380.5	3932	20	8486	18740	8486	-18726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTATTTATTTAGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	120385796	120358820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711
ENSMUSG00000027288.17_120359000_120394288_1	chr2	-	1077	6	ISM	ENSMUSG00000027288.17	ENST00000565380.5	3932	20	-6	18919	0	-18905	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTACGTTGAAGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	120394288	120358999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ENSMUSG00000027293.14_119920308_119927523_1	chr2	-	1938	2	ISM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	57564	652	57564	-652	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGCAGGGGGATTACC	NA	NA	NA	NA	NA	NA	NA	NA	119927523	119920307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119922166_119927443
ENSMUSG00000027293.14_119920359_119927579_1	chr2	-	1943	2	ISM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	57508	703	57508	-703	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTAAGAGAAAATGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	119927579	119920358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119922166_119927443
ENSMUSG00000027293.14_119920505_119932595_1	chr2	-	1921	3	ISM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	52492	849	52492	-849	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGAAGTAGGAATCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	119932595	119920504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119922166_119927443_119927609_119932500
ENSMUSG00000027293.14_119920546_119932666_1	chr2	-	1951	3	ISM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	52421	890	52421	-890	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCTGTGGCCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	119932666	119920545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119922166_119927443_119927609_119932500
ENSMUSG00000027293.14_119920619_119932702_1	chr2	-	1914	3	ISM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	52385	963	52385	-963	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTCTGCCTCTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	119932702	119920618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119922166_119927443_119927609_119932500
ENSMUSG00000027293.14_119920823_119958116_1	chr2	-	1965	4	ISM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	26971	1167	26971	-1167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCATCCTGAGCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	119958116	119920822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072
ENSMUSG00000027293.14_119920901_119958151_1	chr2	-	1922	4	ISM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	26936	1245	26936	-1245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAGAATTTAAATTCAATA	NA	NA	NA	NA	NA	NA	NA	NA	119958151	119920900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072
ENSMUSG00000027293.14_119921179_119984836_1	chr2	-	1956	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	251	1523	251	-1523	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACAGAACAGAGAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	119984836	119921178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
ENSMUSG00000027298.18_119632132_119643343_1	chr2	+	1803	16	ISM	ENSMUSG00000027298.18	ENST00000558165.3	2581	18	107	4171	107	-4171	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGGACTATTATCGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	119632131	119643343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643040_119643136_119643283
ENSMUSG00000027298.18_119633824_119647173_1	chr2	+	1848	16	ISM	ENSMUSG00000027298.18	ENST00000558165.3	2581	18	1799	341	1799	-341	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCACGTGTCTGCGAAT	NA	NA	NA	NA	NA	NA	NA	NA	119633823	119647173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643040_119643136_119643283_119643444_119643643_119643779_119647078
ENSMUSG00000027298.18_119638313_119647317_1	chr2	+	1724	13	ISM	ENSMUSG00000027298.18	ENST00000558165.3	2581	18	6288	197	6288	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATCCAGCAGCGAGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	119638312	119647317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643040_119643136_119643283_119643444_119643643_119643779_119647078
ENSMUSG00000027298.18_119638340_119647394_1	chr2	+	1774	13	ISM	ENSMUSG00000027298.18	ENST00000558165.3	2581	18	6315	120	6315	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCCGGAGGGCTATCCG	NA	NA	NA	NA	NA	NA	NA	NA	119638339	119647394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643040_119643136_119643283_119643444_119643643_119643779_119647078
ENSMUSG00000027298.18_119638414_119647448_1	chr2	+	1754	13	ISM	ENSMUSG00000027298.18	ENST00000558165.3	2581	18	6389	66	6389	-66	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCTCAATGAGAACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	119638413	119647448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643040_119643136_119643283_119643444_119643643_119643779_119647078
ENSMUSG00000027303.19_130292324_130395400_1	chr2	+	2670	22	FSM	ENSMUSG00000027303.19	ENST00000399903.7	3329	22	118	541	118	-541	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACAGACAGGAGAATTGC	NA	NA	NA	NA	NA	NA	NA	NA	130292323	130395400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_130292479_130345305_130345473_130345913_130346256_130351749_130351777_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ENSMUSG00000027303.19_130292464_130395500_1	chr2	+	2630	22	FSM	ENSMUSG00000027303.19	ENST00000399903.7	3329	22	258	441	0	-441	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTTCTATTACCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	130292463	130395500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_130292479_130345305_130345473_130345913_130346256_130351749_130351777_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ENSMUSG00000027303.19_130345393_130395655_1	chr2	+	2683	21	ISM	ENSMUSG00000027303.19	ENST00000399903.7	3329	22	53187	286	52929	-286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAATATCTTTTCCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	130345392	130395655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130345473_130345913_130346256_130351749_130351777_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ENSMUSG00000027303.19_130346042_130395943_1	chr2	+	2763	20	ISM	ENSMUSG00000027303.19	ENST00000399903.7	3329	22	53836	-2	53578	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATCGGTCCCTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	130346041	130395943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130346256_130351749_130351777_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ENSMUSG00000027303.19_130346129_130395943_1	chr2	+	2676	20	ISM	ENSMUSG00000027303.19	ENST00000399903.7	3329	22	53923	-2	53665	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATCGGTCCCTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	130346128	130395943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130346256_130351749_130351777_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ENSMUSG00000027305.10_119485927_119490565_1	chr2	-	691	4	ISM	ENSMUSG00000027305.10	ENSMUST00000028768.2	1451	5	2714	-5	577	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	119490565	119485926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482
ENSMUSG00000027305.10_119486120_119490565_1	chr2	-	323	3	FSM	ENSMUSG00000027305.10	ENST00000676533.1	899	3	577	-1	577	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGACGTCAGTAGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	119490565	119486119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_119486174_119488754_119488941_119490482
ENSMUSG00000027305.10_119486862_119490966_1	chr2	-	732	3	ISM	ENSMUSG00000027305.10	ENSMUST00000028768.2	1451	5	2313	930	176	-741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATTGGACAAGGTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	119490966	119486861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119486924_119488754_119488941_119490482
ENSMUSG00000027306.16_119448779_119474301_1	chr2	+	1503	9	ISM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	0	6340	0	-6340	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCCAAGTTCTAGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	119448778	119474301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264
ENSMUSG00000027306.16_119448948_119474332_1	chr2	+	1365	9	ISM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	169	6309	169	-6309	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCAAAGCAAGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	119448947	119474332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264
ENSMUSG00000027306.16_119449062_119477629_1	chr2	+	1359	10	ISM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	283	3012	-136	-3012	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTACCTTCCACAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	119449061	119477629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570
ENSMUSG00000027306.16_119449175_119479428_1	chr2	+	1351	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	396	1213	-23	-1213	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAAGCTCGAAGAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	119449174	119479428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ENSMUSG00000027306.16_119449198_119479481_1	chr2	+	1381	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	419	1160	0	-1160	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTACTCTAACTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	119449197	119479481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ENSMUSG00000027306.16_119449210_119479529_1	chr2	+	1417	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	431	1112	12	-1112	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCAGTCAAAAGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	119449209	119479529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ENSMUSG00000027306.16_119454608_119479669_1	chr2	+	1381	10	ISM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	5829	972	5410	-972	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAAAAGACTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	119454607	119479669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ENSMUSG00000027306.16_119458087_119479827_1	chr2	+	1420	9	ISM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	9308	814	8889	-814	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCACATTTTTGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	119458086	119479827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ENSMUSG00000027306.16_119460815_119479942_1	chr2	+	1450	8	ISM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	12036	699	11617	-699	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTCATTCATTATA	NA	NA	NA	NA	NA	NA	NA	NA	119460814	119479942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ENSMUSG00000027306.16_119465959_119480104_1	chr2	+	1341	6	ISM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	17180	537	16761	-537	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGAATTACTGTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	119465958	119480104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ENSMUSG00000027306.16_119465998_119480166_1	chr2	+	1364	6	ISM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	17219	475	16800	-475	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTGACCTTCTGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	119465997	119480166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ENSMUSG00000027306.16_119466053_119480224_1	chr2	+	1367	6	ISM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	17274	417	16855	-417	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAATGTTCATAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	119466052	119480224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ENSMUSG00000027306.16_119470106_119480380_1	chr2	+	1343	4	ISM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	21327	261	20908	-261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTCCCAAACTCATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	119470105	119480380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119470216_119474264_119474382_119477570_119477680_119479373
ENSMUSG00000027306.16_119470132_119480458_1	chr2	+	1395	4	ISM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	21353	183	20934	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTAGATGTATACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	119470131	119480458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119470216_119474264_119474382_119477570_119477680_119479373
ENSMUSG00000027306.16_119474302_119480641_1	chr2	+	1457	3	ISM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	25523	0	25104	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATCTATAGTTCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	119474301	119480641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119474382_119477570_119477680_119479373
ENSMUSG00000027313.4_119181466_119184089_2	chr2	+	973	4	FSM	ENSMUSG00000027313.4	ENST00000444189.7	975	4	4	-2	4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTGAGTGGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	119181465	119184089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_119182118_119182837_119182874_119183669_119183712_119183846
ENSMUSG00000027313.4_119181710_119184304_1	chr2	+	1079	3	FSM	ENSMUSG00000027313.4	ENSMUST00000028780.4	1637	3	0	558	0	217	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGACCTGCCCTGGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	119181709	119184304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_119182118_119182837_119182874_119183669
ENSMUSG00000027313.4_119181990_119184491_1	chr2	+	981	3	NNC	ENSMUSG00000027313.4	novel	1637	3	NA	NA	280	-371	intron_retention	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTTCCGGGCCTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	119181989	119184491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_119182118_119182837_119182869_119183669
ENSMUSG00000027313.4_119182837_119184578_1	chr2	+	946	2	ISM	ENSMUSG00000027313.4	ENSMUST00000028780.4	1637	3	1127	284	1127	-284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGGCCCGGGGCAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	119182836	119184578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119182874_119183669
ENSMUSG00000027314.7_119156265_119165751_3	chr2	+	3055	11	FSM	ENSMUSG00000027314.7	ENSMUST00000102517.4	3747	11	0	692	0	-389	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTGCCTCTGGGCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	119156264	119165751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_119156688_119156795_119157069_119157543_119157602_119158409_119158674_119159012_119159074_119159162_119159294_119161096_119161267_119161442_119161663_119162623_119163327_119164528_119164638_119165108
ENSMUSG00000027314.7_119156448_119165845_1	chr2	+	2961	11	NNC	ENSMUSG00000027314.7	novel	3747	11	NA	NA	151	-295	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGCTAAACTCCCAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	119156447	119165845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_119156688_119156795_119157069_119157543_119157602_119158409_119158674_119159012_119159074_119159162_119159294_119161096_119161262_119161442_119161663_119162623_119163327_119164528_119164638_119165108
ENSMUSG00000027314.7_119156788_119166059_1	chr2	+	2948	10	ISM	ENSMUSG00000027314.7	ENST00000249749.7	3409	11	491	81	491	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCACTGGCCTTTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	119156787	119166059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119157069_119157543_119157602_119158409_119158674_119159012_119159074_119159162_119159294_119161096_119161267_119161442_119161663_119162623_119163327_119164528_119164638_119165108
ENSMUSG00000027316.16_130881552_130883070_1	chr2	-	906	3	ISM	ENSMUSG00000027316.16	ENSMUST00000110240.10	1426	6	1938	0	1532	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTTTCTGTCATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	130883070	130881551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130882246_130882318_130882396_130882935
ENSMUSG00000027316.16_130881676_130883233_1	chr2	-	864	4	ISM	ENSMUSG00000027316.16	ENSMUST00000028787.12	909	6	1369	-420	1369	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAGACATTAAGGAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	130883233	130881675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130882246_130882318_130882396_130882935_130883071_130883151
ENSMUSG00000027316.16_130881933_130883552_1	chr2	-	873	5	ISM	ENSMUSG00000027316.16	ENSMUST00000028787.12	909	6	1050	-163	1050	163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTCCCCATCCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	130883552	130881932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130882246_130882318_130882396_130882935_130883071_130883151_130883262_130883314
ENSMUSG00000027318.18_130894799_130898165_1	chr2	-	459	3	ISM	ENSMUSG00000027318.18	ENST00000617732.1	1156	5	4962	8	4962	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCAACATTCTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	130898165	130894798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130894883_130894961_130895071_130897899
ENSMUSG00000027318.18_130894962_130898300_1	chr2	-	510	2	ISM	ENSMUSG00000027318.18	ENST00000617732.1	1156	5	4827	171	4827	-171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCCAGTGGGGTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	130898300	130894961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130895071_130897899
ENSMUSG00000027318.18_130898196_130900598_1	chr2	-	534	2	ISM	ENSMUSG00000027318.18	ENST00000617732.1	1156	5	2529	3405	2529	-3405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCACCTGGAGAGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	130900598	130898195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130898713_130900581
ENSMUSG00000027318.18_130898385_130903113_1	chr2	-	456	3	ISM	ENSMUSG00000027318.18	ENST00000617732.1	1156	5	14	3594	14	-3594	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCGTTGGGGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	130903113	130898384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130898713_130900581_130900659_130903062
ENSMUSG00000027323.11_118943298_118965553_1	chr2	+	1140	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	10	2218	10	-245	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGACCAGAATCTGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	118943297	118965553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ENSMUSG00000027323.11_118943411_118965689_1	chr2	+	1163	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	123	2082	123	-109	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAAATGCTCTACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	118943410	118965689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ENSMUSG00000027323.11_118946791_118965798_1	chr2	+	1169	9	ISM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	3503	1973	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGGTAGCAGAAACACAT	NA	NA	NA	NA	NA	NA	NA	NA	118946790	118965798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ENSMUSG00000027323.11_118946791_118965798_2	chr2	+	1047	8	FSM	ENSMUSG00000027323.11	ENST00000423169.6	1047	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGGTAGCAGAAACACAT	NA	NA	NA	NA	NA	NA	NA	NA	118946790	118965798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118965529
ENSMUSG00000027323.11_118946817_118965689_1	chr2	+	1026	8	FSM	ENSMUSG00000027323.11	ENST00000382643.7	1157	8	22	109	22	-109	multi-exon	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAAATGCTCTACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	118946816	118965689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_118946882_118949088_118949337_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ENSMUSG00000027323.11_118949177_118965936_1	chr2	+	1128	8	ISM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	5889	1835	2382	138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCCGAGTACTCTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	118949176	118965936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ENSMUSG00000027323.11_118954284_118965798_1	chr2	+	803	6	ISM	ENSMUSG00000027323.11	ENST00000382643.7	1157	8	7489	0	7489	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGGTAGCAGAAACACAT	NA	NA	NA	NA	NA	NA	NA	NA	118954283	118965798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ENSMUSG00000027323.11_118957550_118966254_1	chr2	+	1180	5	ISM	ENSMUSG00000027323.11	ENST00000382643.7	1157	8	10755	-456	10755	456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGGGTTTCTATAACAG	NA	NA	NA	NA	NA	NA	NA	NA	118957549	118966254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ENSMUSG00000027324.2_118865587_118868841_1	chr2	+	981	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	316	1409	-57	-449	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAACTGCTCCGAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	118865586	118868841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_118865950_118867398_118867696_118868520
ENSMUSG00000027324.2_118865644_118869290_1	chr2	+	1190	3	FSM	ENSMUSG00000027324.2	ENST00000559271.1	1190	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGACAGGGACTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	118865643	118869290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_118865767_118867398_118867696_118868520
ENSMUSG00000027324.2_118865740_118868989_1	chr2	+	976	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	469	1261	96	-301	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAGCAGCCCAGAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	118865739	118868989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_118865950_118867398_118867696_118868520
ENSMUSG00000027327.17_130988244_130993680_1	chr2	-	1057	4	ISM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	8260	-1	8260	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCAGAGGTTAGCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	130993680	130988243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537
ENSMUSG00000027327.17_130988508_131001944_1	chr2	-	982	6	FSM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	-4	263	-4	216	multi-exon	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTGGGGTTTACCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	131001944	130988507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995513_130995631_131001872
ENSMUSG00000027330.17_131028869_131035312_1	chr2	+	1223	9	ISM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	-9	5105	0	-5103	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGCAGCTTGAAGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	131028868	131035312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033687_131034476_131034609_131034987_131035069_131035158
ENSMUSG00000027330.17_131029087_131036064_1	chr2	+	1148	11	ISM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	209	4353	209	-4351	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAAGACCTTAAGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	131029086	131036064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033687_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034
ENSMUSG00000027330.17_131030078_131034540_1	chr2	+	514	7	ISM	ENSMUSG00000027330.17	ENSMUST00000028804.15	3089	16	1209	5875	1200	-5875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCCTGTCGAAAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	131030077	131034540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033642_131033732_131033856_131034476
ENSMUSG00000027330.17_131033663_131039318_1	chr2	+	1082	10	ISM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	4785	1099	4785	-1097	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTTGGGAGCCAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	131033662	131039318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_131033687_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ENSMUSG00000027330.17_131033663_131039388_1	chr2	+	1152	10	ISM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	4785	1029	4785	-1027	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTTGGGGGCATGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	131033662	131039388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_131033687_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ENSMUSG00000027330.17_131034565_131039504_1	chr2	+	1156	9	ISM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	5687	913	5687	-911	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTGGATGCCAGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	131034564	131039504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ENSMUSG00000027330.17_131035241_131039710_1	chr2	+	1155	7	ISM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	6363	707	6363	-705	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCATAGACTTATGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	131035240	131039710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ENSMUSG00000027330.17_131035295_131039778_1	chr2	+	1169	7	ISM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	6417	639	6417	-637	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCATTTTTTTGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	131035294	131039778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ENSMUSG00000027330.17_131036597_131040106_1	chr2	+	1153	3	ISM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	7719	311	7719	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTTTCTGTGTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	131036596	131040106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_131036680_131038896_131039009_131039148
ENSMUSG00000027330.17_131038938_131040219_1	chr2	+	1142	2	ISM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	10060	198	10060	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATGATGGCCTATGGC	NA	NA	NA	NA	NA	NA	NA	NA	131038937	131040219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_131039009_131039148
ENSMUSG00000027331.16_118644484_118664799_1	chr2	+	1224	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	0	3378	0	160	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGAGGAACCTGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	118644483	118664799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ENSMUSG00000027331.16_118644605_118664869_1	chr2	+	1173	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	121	3308	-109	230	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTAAACCAGCTGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	118644604	118664869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ENSMUSG00000027331.16_118644881_118665123_1	chr2	+	1242	8	FSM	ENSMUSG00000027331.16	ENSMUST00000110842.8	925	8	167	-484	167	484	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATATTCTGACTAACAC	NA	NA	NA	NA	NA	NA	NA	NA	118644880	118665123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ENSMUSG00000027331.16_118648342_118665236_1	chr2	+	1265	7	ISM	ENSMUSG00000027331.16	ENSMUST00000110842.8	925	8	3628	-597	3628	597	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAGAGGATAGCCTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	118648341	118665236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ENSMUSG00000027331.16_118654203_118665460_1	chr2	+	1176	4	ISM	ENSMUSG00000027331.16	ENSMUST00000110842.8	925	8	9489	-821	9489	821	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGGTCAAGGAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	118654202	118665460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118654268_118659439_118659496_118662033_118662109_118664480
ENSMUSG00000027331.16_118654250_118665515_1	chr2	+	1184	4	ISM	ENSMUSG00000027331.16	ENSMUST00000110842.8	925	8	9536	-876	9536	876	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTAAGCCAATTGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	118654249	118665515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118654268_118659439_118659496_118662033_118662109_118664480
ENSMUSG00000027332.12_118692509_118712634_1	chr2	+	2835	12	FSM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	74	756	74	-756	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGGCCGTCACAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	118692508	118712634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ENSMUSG00000027332.12_118692509_118712683_1	chr2	+	2884	12	FSM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	74	707	74	-707	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGTTCCCAAAAATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	118692508	118712683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ENSMUSG00000027332.12_118700212_118712828_1	chr2	+	2799	10	ISM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	7777	562	7777	-562	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATACACTGACCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	118700211	118712828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ENSMUSG00000027332.12_118701859_118712952_1	chr2	+	2871	9	ISM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	9424	438	9424	-438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCCATATGGGGGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	118701858	118712952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ENSMUSG00000027332.12_118703647_118713135_1	chr2	+	2792	7	ISM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	11212	255	11212	-255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGGAATCTTAAACTAG	NA	NA	NA	NA	NA	NA	NA	NA	118703646	118713135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ENSMUSG00000027332.12_118703689_118713194_1	chr2	+	2809	7	ISM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	11254	196	11254	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGCAAGAGAAGAACACTG	NA	NA	NA	NA	NA	NA	NA	NA	118703688	118713194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ENSMUSG00000027332.12_118703720_118713265_1	chr2	+	2849	7	ISM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	11285	125	11285	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACCCAATCTGTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	118703719	118713265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ENSMUSG00000027332.12_118705143_118713390_1	chr2	+	2911	6	ISM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	12708	0	12708	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAAAAGTGGATGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	118705142	118713390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ENSMUSG00000027333.19_131362609_131367092_1	chr2	+	913	2	ISM	ENSMUSG00000027333.19	ENSMUST00000110189.9	1919	6	28746	0	28696	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCTTCTCTCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	131362608	131367092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_131363092_131366662
ENSMUSG00000027341.11_132082144_132089574_1	chr2	-	727	4	FSM	ENSMUSG00000027341.11	ENSMUST00000028816.9	1612	4	153	732	0	-730	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGGAAGGCAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	132089574	132082143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089492
ENSMUSG00000027341.11_132082193_132089619_1	chr2	-	723	4	FSM	ENSMUSG00000027341.11	ENSMUST00000028816.9	1612	4	108	781	-45	-779	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTTTTTCCACATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	132089619	132082192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089492
ENSMUSG00000027342.15_132091543_132091753_1	chr2	-	133	2	ISM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	3481	461	3481	-461	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTAGGCATTGCTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	132091753	132091542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_132091616_132091693
ENSMUSG00000027349.6_117080220_117101208_1	chr2	+	1048	8	FSM	ENSMUSG00000027349.6	ENSMUST00000028825.5	1861	8	0	813	0	-813	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGTGGTAGAGGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	117080219	117101208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_117080320_117088114_117088261_117089701_117089837_117090655_117090835_117093319_117093401_117094303_117094421_117098260_117098429_117101086
ENSMUSG00000027349.6_117088174_117101316_1	chr2	+	997	7	ISM	ENSMUSG00000027349.6	ENSMUST00000028825.5	1861	8	7954	705	7954	-705	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGGTGGCCGAGGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	117088173	117101316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117088261_117089701_117089837_117090655_117090835_117093319_117093401_117094303_117094421_117098260_117098429_117101086
ENSMUSG00000027349.6_117088220_117101371_1	chr2	+	1006	7	ISM	ENSMUSG00000027349.6	ENSMUST00000028825.5	1861	8	8000	650	8000	-650	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGGAAGAGGGGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	117088219	117101371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117088261_117089701_117089837_117090655_117090835_117093319_117093401_117094303_117094421_117098260_117098429_117101086
ENSMUSG00000027349.6_117089771_117101496_1	chr2	+	1021	6	ISM	ENSMUSG00000027349.6	ENSMUST00000028825.5	1861	8	9551	525	9551	-525	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCACTGCTTCTTACTAGA	NA	NA	NA	NA	NA	NA	NA	NA	117089770	117101496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117089837_117090655_117090835_117093319_117093401_117094303_117094421_117098260_117098429_117101086
ENSMUSG00000027349.6_117090656_117101618_1	chr2	+	1077	5	ISM	ENSMUSG00000027349.6	ENSMUST00000028825.5	1861	8	10436	403	10436	-403	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCGGTTGATGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	117090655	117101618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117090835_117093319_117093401_117094303_117094421_117098260_117098429_117101086
ENSMUSG00000027349.6_117093346_117101755_1	chr2	+	1009	4	ISM	ENSMUSG00000027349.6	ENSMUST00000028825.5	1861	8	13126	266	13126	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTATTTTATTGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	117093345	117101755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117093401_117094303_117094421_117098260_117098429_117101086
ENSMUSG00000027349.6_117098259_117102021_1	chr2	+	1105	2	ISM	ENSMUSG00000027349.6	ENSMUST00000028825.5	1861	8	18039	0	18039	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTGTGTCATGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	117098258	117102021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117098429_117101086
ENSMUSG00000027357.17_132688788_132706055_1	chr2	+	641	5	ISM	ENSMUSG00000027357.17	ENST00000452938.5	1687	6	63	2638	63	-2306	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTTTTCAATTATGCT	NA	NA	NA	NA	NA	NA	NA	NA	132688787	132706055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_132689046_132691785_132691924_132696812_132696943_132704254_132704324_132706009
ENSMUSG00000027357.17_132688908_132707807_1	chr2	+	618	6	FSM	ENSMUSG00000027357.17	ENST00000452938.5	1687	6	183	886	183	-554	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCGGAAAACTGTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	132688907	132707807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_132689046_132691785_132691924_132696812_132696943_132704254_132704324_132706009_132706102_132707756
ENSMUSG00000027357.17_132688963_132707852_1	chr2	+	608	6	FSM	ENSMUSG00000027357.17	ENST00000452938.5	1687	6	238	841	238	-509	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATCCAGCAGCAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	132688962	132707852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_132689046_132691785_132691924_132696812_132696943_132704254_132704324_132706009_132706102_132707756
ENSMUSG00000027357.17_132689028_132707890_1	chr2	+	581	6	FSM	ENSMUSG00000027357.17	ENST00000452938.5	1687	6	303	803	303	-471	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCGCCAGCGAAAGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	132689027	132707890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_132689046_132691785_132691924_132696812_132696943_132704254_132704324_132706009_132706102_132707756
ENSMUSG00000027357.17_132696845_132708102_1	chr2	+	605	4	ISM	ENSMUSG00000027357.17	ENST00000452938.5	1687	6	8120	591	7191	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATTCTTGTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	132696844	132708102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_132696943_132704254_132704324_132706009_132706102_132707756
ENSMUSG00000027357.17_132706043_132708361_1	chr2	+	664	2	ISM	ENSMUSG00000027357.17	ENSMUST00000124836.8	1267	7	16389	0	16389	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAAAGAACAAATA	NA	NA	NA	NA	NA	NA	NA	NA	132706042	132708361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_132706102_132707756
ENSMUSG00000027359.17_126395017_126429858_1	chr2	+	1764	9	FSM	ENSMUSG00000027359.17	ENST00000380902.8	2075	9	9	302	9	-302	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCCTGGTGGTTTAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	126395016	126429858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_126395553_126403456_126403667_126409666_126409792_126416621_126416817_126419779_126419871_126420768_126420968_126422825_126422924_126428171_126428303_126429679
ENSMUSG00000027359.17_126395336_126430163_1	chr2	+	1750	9	FSM	ENSMUSG00000027359.17	ENST00000380902.8	2075	9	328	-3	328	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACGAGGCTTCGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	126395335	126430163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_126395553_126403456_126403667_126409666_126409792_126416621_126416817_126419779_126419871_126420768_126420968_126422825_126422924_126428171_126428303_126429679
ENSMUSG00000027360.6_126435973_126443755_1	chr2	-	975	5	ISM	ENSMUSG00000027360.6	ENST00000267845.8	2213	12	16783	288	16783	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCAAGTTCTACAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	126443755	126435972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126436607_126436756_126436859_126439790_126439890_126443533_126443625_126443706
ENSMUSG00000027360.6_126436148_126444914_1	chr2	-	948	6	ISM	ENSMUSG00000027360.6	ENST00000267845.8	2213	12	15624	463	15624	-463	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCAGAACAGGAGGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	126444914	126436147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126436607_126436756_126436859_126439790_126439890_126443533_126443625_126443706_126443870_126444880
ENSMUSG00000027360.6_126436345_126446205_1	chr2	-	973	8	ISM	ENSMUSG00000027360.6	ENST00000267845.8	2213	12	14333	660	14333	-660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTCAGTCAGCGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	126446205	126436344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126436607_126436756_126436859_126439790_126439890_126443533_126443625_126443706_126443870_126444880_126444948_126445761_126445906_126446160
ENSMUSG00000027360.6_126436504_126448346_1	chr2	-	971	9	ISM	ENSMUSG00000027360.6	ENST00000267845.8	2213	12	12192	819	12192	-819	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACATCCCAGTTTACC	NA	NA	NA	NA	NA	NA	NA	NA	126448346	126436503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126436607_126436756_126436859_126439790_126439890_126443533_126443625_126443706_126443870_126444880_126444948_126445761_126445906_126446160_126446296_126448279
ENSMUSG00000027360.6_126436756_126449330_1	chr2	-	1039	9	ISM	ENSMUSG00000027360.6	ENST00000267845.8	2213	12	11208	1071	11208	-1071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGCTCTTGCATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	126449330	126436755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126436859_126439790_126439890_126443533_126443625_126443706_126443870_126444880_126444948_126445761_126445906_126446160_126446296_126448279_126448403_126449216
ENSMUSG00000027360.6_126439846_126458163_1	chr2	-	949	9	ISM	ENSMUSG00000027360.6	ENST00000267845.8	2213	12	2375	4161	2375	-4161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGTGATTCGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	126458163	126439845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126439890_126443533_126443625_126443706_126443870_126444880_126444948_126445761_126445906_126446160_126446296_126448279_126448403_126449216_126449331_126458095
ENSMUSG00000027360.6_126443534_126458268_1	chr2	-	1010	8	ISM	ENSMUSG00000027360.6	ENST00000267845.8	2213	12	2270	7849	2270	-7849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTCCCAGGAGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	126458268	126443533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126443625_126443706_126443870_126444880_126444948_126445761_126445906_126446160_126446296_126448279_126448403_126449216_126449331_126458095
ENSMUSG00000027360.6_126443724_126460581_1	chr2	-	1025	8	ISM	ENSMUSG00000027360.6	ENST00000267845.8	2213	12	-43	8039	17	-8039	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTACTGGATTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	126460581	126443723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126443870_126444880_126444948_126445761_126445906_126446160_126446296_126448279_126448403_126449216_126449331_126458095_126458269_126460458
ENSMUSG00000027361.16_126471236_126492454_1	chr2	-	1527	5	NIC	ENSMUSG00000027361.16	novel	2651	9	NA	NA	24952	-397	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAAATATTTCATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	126492454	126471235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492407
ENSMUSG00000027361.16_126471386_126494207_1	chr2	-	1518	6	NIC	ENSMUSG00000027361.16	novel	2651	9	NA	NA	23199	-547	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCGAATCTGCAAAATATAT	NA	NA	NA	NA	NA	NA	NA	NA	126494207	126471385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492407_126492541_126494152
ENSMUSG00000027361.16_126471433_126494261_1	chr2	-	1525	6	NIC	ENSMUSG00000027361.16	novel	2651	9	NA	NA	23145	-594	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTGGCGACCATGACA	NA	NA	NA	NA	NA	NA	NA	NA	126494261	126471432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492407_126492541_126494152
ENSMUSG00000027361.16_126471579_126495562_1	chr2	-	1553	7	NIC	ENSMUSG00000027361.16	novel	2651	9	NA	NA	21844	-740	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACATATCCTGCATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	126495562	126471578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492407_126492541_126494152_126494348_126495474
ENSMUSG00000027361.16_126471766_126517313_1	chr2	-	1592	9	NIC	ENSMUSG00000027361.16	novel	2651	9	NA	NA	93	-927	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGTGGACTGATGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	126517313	126471765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492407_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ENSMUSG00000027361.16_126471863_126517335_1	chr2	-	1517	9	NIC	ENSMUSG00000027361.16	novel	2651	9	NA	NA	71	-1024	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACGGGGAATTCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	126517335	126471862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492407_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ENSMUSG00000027361.16_126471914_126517406_1	chr2	-	1537	9	NIC	ENSMUSG00000027361.16	novel	2651	9	NA	NA	0	-1075	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTGATGAAGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	126517406	126471913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492407_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ENSMUSG00000027361.16_126480941_126517427_1	chr2	-	1377	8	NIC	ENSMUSG00000027361.16	novel	1400	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATTGAATGAGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	126517427	126480940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_126481265_126488482_126488666_126491987_126492102_126492407_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ENSMUSG00000027363.16_126549280_126592985_1	chr2	+	2400	14	ISM	ENSMUSG00000027363.16	ENSMUST00000028841.14	4145	19	17	8232	0	-8225	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCTTACTGGACTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	126549279	126592985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899
ENSMUSG00000027363.16_126561977_126594347_1	chr2	+	2353	13	ISM	ENSMUSG00000027363.16	ENSMUST00000110416.3	4154	19	12697	6863	12697	-6863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAAGAGCTGCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	126561976	126594347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191
ENSMUSG00000027363.16_126571141_126596955_1	chr2	+	2335	12	ISM	ENSMUSG00000027363.16	ENSMUST00000110416.3	4154	19	21861	4255	21861	-4255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTACTTGTCTTTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	126571140	126596955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768
ENSMUSG00000027363.16_126575878_126598035_1	chr2	+	2385	11	ISM	ENSMUSG00000027363.16	ENSMUST00000110416.3	4154	19	26598	3175	26598	-3175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGTCTCTCTGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	126575877	126598035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892
ENSMUSG00000027363.16_126584096_126600874_1	chr2	+	2321	9	ISM	ENSMUSG00000027363.16	ENSMUST00000110416.3	4154	19	34816	336	34816	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCATTTCTAGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	126584095	126600874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ENSMUSG00000027363.16_126584154_126600932_1	chr2	+	2321	9	ISM	ENSMUSG00000027363.16	ENSMUST00000110416.3	4154	19	34874	278	34874	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAGGAATGTATATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	126584153	126600932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ENSMUSG00000027363.16_126584441_126601217_1	chr2	+	2319	9	ISM	ENSMUSG00000027363.16	ENSMUST00000110416.3	4154	19	35161	-7	35161	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAAACCTTGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	126584440	126601217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ENSMUSG00000027366.13_126734450_126746918_1	chr2	-	1846	2	ISM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	28237	2139	28237	-2139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGGGTTAGACCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	126746918	126734449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126736207_126746829
ENSMUSG00000027366.13_126734706_126754643_1	chr2	-	1818	4	ISM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	20512	2395	20512	-2395	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAACAAATACACACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	126754643	126734705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562
ENSMUSG00000027366.13_126734993_126761632_1	chr2	-	1841	8	ISM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	13523	2682	13523	-2682	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGGTCTGGTAACCACA	NA	NA	NA	NA	NA	NA	NA	NA	126761632	126734992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558
ENSMUSG00000027366.13_126735255_126765608_1	chr2	-	1937	10	ISM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	9547	2944	9547	-2944	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGTTGTTAGAAGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	126765608	126735254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375
ENSMUSG00000027366.13_126735692_126768919_1	chr2	-	1826	13	ISM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	6236	3381	6236	-3381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAGATCATGTGTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	126768919	126735691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736
ENSMUSG00000027366.13_126735882_126774940_1	chr2	-	1830	15	FSM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	215	3571	215	-3571	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATACATAGTGAAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	126774940	126735881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
ENSMUSG00000027366.13_126736035_126775155_1	chr2	-	1892	15	FSM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	0	3724	0	-3724	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCCTGCCTCTGTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	126775155	126736034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
ENSMUSG00000027367.17_127112149_127140259_1	chr2	+	2515	8	NNC	ENSMUSG00000027367.17	novel	3116	8	NA	NA	0	-593	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAGTAATAGACACAGT	NA	NA	NA	NA	NA	NA	NA	NA	127112148	127140259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_127112801_127126014_127126224_127126451_127126502_127132691_127132803_127132877_127132953_127134070_127134171_127137403_127137489_127139026
ENSMUSG00000027367.17_127112624_127140690_1	chr2	+	2479	8	FSM	ENSMUSG00000027367.17	ENSMUST00000110375.9	3116	8	475	162	-30	-162	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATGTGTGCGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	127112623	127140690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_127112801_127126014_127126224_127126451_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
ENSMUSG00000027367.17_127126013_127140853_1	chr2	+	2467	7	ISM	ENSMUSG00000027367.17	ENSMUST00000110375.9	3116	8	13864	-1	13359	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGAGTGTTCATTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	127126012	127140853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127126224_127126451_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
ENSMUSG00000027368.7_127178079_127179555_1	chr2	+	876	4	FSM	ENSMUSG00000027368.7	ENSMUST00000028846.7	1617	4	0	741	0	-741	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTCAGCCACCATCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	127178078	127179555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_127178558_127178696_127178819_127179168_127179389_127179500
ENSMUSG00000027368.7_127179212_127180156_1	chr2	+	833	2	ISM	ENSMUSG00000027368.7	ENSMUST00000028846.7	1617	4	1133	140	1133	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGACATTTAACGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	127179211	127180156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127179389_127179500
ENSMUSG00000027368.7_127179332_127180296_1	chr2	+	853	2	ISM	ENSMUSG00000027368.7	ENSMUST00000028846.7	1617	4	1253	0	1253	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATTGTCTGGTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	127179331	127180296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127179389_127179500
ENSMUSG00000027371.11_127278136_127283983_1	chr2	-	1015	7	ISM	ENSMUSG00000027371.11	ENSMUST00000028848.4	1211	8	2487	1	2487	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAGCTTCCACTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	127283983	127278135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127278327_127278465_127278554_127278656_127278766_127280032_127280193_127280429_127280490_127282305_127282523_127283793
ENSMUSG00000027374.13_127429142_127433871_1	chr2	+	489	3	ISM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	0	14878	0	-14878	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAGGAGGATAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	127429141	127433871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127429406_127432614_127432702_127433733
ENSMUSG00000027374.13_127429339_127437615_1	chr2	+	450	5	ISM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	197	11134	197	-11134	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCTCTGATAAAAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	127429338	127437615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583
ENSMUSG00000027374.13_127432643_127437717_1	chr2	+	457	4	ISM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	3501	11032	3501	-11032	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCGGAAGAGGAAGATCAA	NA	NA	NA	NA	NA	NA	NA	NA	127432642	127437717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127432702_127433733_127433872_127436363_127436490_127437583
ENSMUSG00000027374.13_127436417_127441978_1	chr2	+	480	5	ISM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	7275	6771	7275	-6771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGCTTCGTCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	127436416	127441978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931
ENSMUSG00000027374.13_127437593_127442781_1	chr2	+	431	5	ISM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	8451	5968	8451	-5968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAACGATACGAAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	127437592	127442781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748
ENSMUSG00000027374.13_127437726_127444415_1	chr2	+	497	7	ISM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	8584	4334	8584	-4334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTCCATGGGCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	127437725	127444415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304
ENSMUSG00000027374.13_127440146_127445634_1	chr2	+	442	6	ISM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	11004	3115	11004	-3115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCACATGGGGCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	127440145	127445634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ENSMUSG00000027374.13_127441953_127445775_1	chr2	+	511	5	ISM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	12811	2974	12811	-2974	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCGGAAGGCCAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	127441952	127445775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ENSMUSG00000027374.13_127444303_127445877_1	chr2	+	468	2	ISM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	15161	2872	15161	-2872	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAATTATAGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	127444302	127445877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127444442_127445548
ENSMUSG00000027374.13_127444351_127445932_1	chr2	+	475	2	ISM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	15209	2817	15209	-2817	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTTAGATGCAAATATC	NA	NA	NA	NA	NA	NA	NA	NA	127444350	127445932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127444442_127445548
ENSMUSG00000027374.13_127444403_127445984_1	chr2	+	475	2	ISM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	15261	2765	15261	-2765	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGAATTAGGACATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	127444402	127445984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127444442_127445548
ENSMUSG00000027376.16_127370706_127380627_1	chr2	-	1547	17	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	2754	31	2678	-31	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCAGGGTCACCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	127380627	127370705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127370739_127371051_127371159_127371319_127371410_127372039_127372100_127372272_127372365_127372623_127372678_127373024_127373118_127373728_127373801_127374656_127374804_127376744_127376830_127376966_127377059_127377464_127377589_127378462_127378616_127378875_127379036_127379249_127379314_127380177_127380253_127380581
ENSMUSG00000027376.16_127371098_127380676_1	chr2	-	1517	16	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	2705	423	2629	-423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	994	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCAAGACCTCCAAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	127380676	127371097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127371159_127371319_127371410_127372039_127372100_127372272_127372365_127372623_127372678_127373024_127373118_127373728_127373801_127374656_127374804_127376744_127376830_127376966_127377059_127377464_127377589_127378462_127378616_127378875_127379036_127379249_127379314_127380177_127380253_127380581
ENSMUSG00000027376.16_127371320_127380788_1	chr2	-	1568	15	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	2593	645	2517	-645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTCCCCAACCCACC	NA	NA	NA	NA	NA	NA	NA	NA	127380788	127371319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127371410_127372039_127372100_127372272_127372365_127372623_127372678_127373024_127373118_127373728_127373801_127374656_127374804_127376744_127376830_127376966_127377059_127377464_127377589_127378462_127378616_127378875_127379036_127379249_127379314_127380177_127380253_127380581
ENSMUSG00000027376.16_127372038_127381193_1	chr2	-	1570	15	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	2188	1363	2112	-1363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGGGTACAGATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	127381193	127372037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127372100_127372272_127372365_127372623_127372678_127373024_127373118_127373728_127373801_127374656_127374804_127376744_127376830_127376966_127377059_127377464_127377589_127378462_127378616_127378875_127379036_127379249_127379314_127380177_127380253_127380581_127380788_127381102
ENSMUSG00000027376.16_127372273_127381506_1	chr2	-	1571	15	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	1875	1598	1799	-1598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGTGTGGCCTCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	127381506	127372272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127372365_127372623_127372678_127373024_127373118_127373728_127373801_127374656_127374804_127376744_127376830_127376966_127377059_127377464_127377589_127378462_127378616_127378875_127379036_127379249_127379314_127380177_127380253_127380581_127380788_127381102_127381193_127381442
ENSMUSG00000027376.16_127372283_127381750_1	chr2	-	1615	16	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	1631	1608	1555	-1608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	931	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGAGGGTAGGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	127381750	127372282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127372365_127372623_127372678_127373024_127373118_127373728_127373801_127374656_127374804_127376744_127376830_127376966_127377059_127377464_127377589_127378462_127378616_127378875_127379036_127379249_127379314_127380177_127380253_127380581_127380788_127381102_127381193_127381442_127381507_127381696
ENSMUSG00000027376.16_127373073_127381937_1	chr2	-	1520	15	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	1444	2398	1368	-2398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGAAGCCTCTACCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	127381937	127373072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127373118_127373728_127373801_127374656_127374804_127376744_127376830_127376966_127377059_127377464_127377589_127378462_127378616_127378875_127379036_127379249_127379314_127380177_127380253_127380581_127380788_127381102_127381193_127381442_127381507_127381696_127381818_127381915
ENSMUSG00000027376.16_127374776_127383022_1	chr2	-	1541	15	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	359	4101	283	-4101	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTTCCAAGTAGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	127383022	127374775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127374804_127376744_127376830_127376966_127377059_127377464_127377589_127378462_127378616_127378875_127379036_127379249_127379314_127380177_127380253_127380581_127380788_127381102_127381193_127381442_127381507_127381696_127381818_127381915_127382119_127382431_127382482_127382996
ENSMUSG00000027376.16_127376686_127383072_1	chr2	-	1622	14	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	309	6011	233	-6011	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAACAAAACAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	127383072	127376685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127376830_127376966_127377059_127377464_127377589_127378462_127378616_127378875_127379036_127379249_127379314_127380177_127380253_127380581_127380788_127381102_127381193_127381442_127381507_127381696_127381818_127381915_127382119_127382431_127382482_127382996
ENSMUSG00000027376.16_127376810_127383162_1	chr2	-	1588	14	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	219	6135	143	-6135	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	956	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTGGAAGGTTCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	127383162	127376809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127376830_127376966_127377059_127377464_127377589_127378462_127378616_127378875_127379036_127379249_127379314_127380177_127380253_127380581_127380788_127381102_127381193_127381442_127381507_127381696_127381818_127381915_127382119_127382431_127382482_127382996
ENSMUSG00000027376.16_127377023_127383305_1	chr2	-	1655	13	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	76	6348	0	-6348	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1065	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTATCCTATCTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	127383305	127377022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127377059_127377464_127377589_127378462_127378616_127378875_127379036_127379249_127379314_127380177_127380253_127380581_127380788_127381102_127381193_127381442_127381507_127381696_127381818_127381915_127382119_127382431_127382482_127382996
ENSMUSG00000027378.17_127582656_127611577_1	chr2	-	1489	13	ISM	ENSMUSG00000027378.17	ENSMUST00000028857.14	2260	20	19197	4	2	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGTTATATCTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	127611577	127582655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610179_127611534
ENSMUSG00000027378.17_127582846_127610182_1	chr2	-	1252	12	NNC	ENSMUSG00000027378.17	novel	1295	13	NA	NA	1397	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGCTAATGGCGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	127610182	127582845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595988_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608039_127610090
ENSMUSG00000027378.17_127582846_127612312_1	chr2	-	1433	14	ISM	ENSMUSG00000027378.17	ENSMUST00000028857.14	2260	20	18462	194	-733	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGCTAATGGCGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	127612312	127582845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610179_127611534_127611578_127612178
ENSMUSG00000027378.17_127582868_127614044_1	chr2	-	1435	15	ISM	ENSMUSG00000027378.17	ENSMUST00000028857.14	2260	20	16730	216	-2465	-22	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGGGTGAAATAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	127614044	127582867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610179_127611534_127611578_127612178_127612313_127614020
ENSMUSG00000027378.17_127582993_127615888_1	chr2	-	1459	16	ISM	ENSMUSG00000027378.17	ENSMUST00000028857.14	2260	20	14886	341	-4309	-147	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGATGGAAAGCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	127615888	127582992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817
ENSMUSG00000027378.17_127583059_127615925_1	chr2	-	1430	16	ISM	ENSMUSG00000027378.17	ENSMUST00000028857.14	2260	20	14849	407	-4346	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTCCCTCTTCTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	127615925	127583058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817
ENSMUSG00000027378.17_127589920_127621084_1	chr2	-	1541	15	ISM	ENSMUSG00000027378.17	ENSMUST00000028857.14	2260	20	9690	7268	-9505	-7074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTTGGGGTCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	127621084	127589919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023
ENSMUSG00000027378.17_127595893_127622056_1	chr2	-	1502	15	ISM	ENSMUSG00000027378.17	ENSMUST00000028857.14	2260	20	8718	13241	8718	-13047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTAGCTGGCCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	127622056	127595892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982
ENSMUSG00000027378.17_127598012_127630774_1	chr2	-	1471	15	ISM	ENSMUSG00000027378.17	ENSMUST00000028857.14	2260	20	0	15360	0	-15166	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTCCTTCTGTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	127630774	127598011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
ENSMUSG00000027379.14_127643042_127663779_1	chr2	-	2681	18	ISM	ENSMUSG00000027379.14	ENSMUST00000028858.8	3421	25	10006	0	10006	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACCTAGTTGTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	127663779	127643041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594
ENSMUSG00000027379.14_127643210_127665930_1	chr2	-	2618	20	ISM	ENSMUSG00000027379.14	ENSMUST00000028858.8	3421	25	7855	168	7855	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGCTAATTGTGATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	127665930	127643209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878
ENSMUSG00000027379.14_127643263_127665979_1	chr2	-	2614	20	ISM	ENSMUSG00000027379.14	ENSMUST00000028858.8	3421	25	7806	221	7806	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGAAATTACTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	127665979	127643262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878
ENSMUSG00000027379.14_127644968_127669345_1	chr2	-	2657	21	ISM	ENSMUSG00000027379.14	ENSMUST00000028858.8	3421	25	4440	1926	4440	-1926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGGAAACCTGAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	127669345	127644967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220
ENSMUSG00000027379.14_127646175_127671434_1	chr2	-	2656	21	ISM	ENSMUSG00000027379.14	ENSMUST00000028858.8	3421	25	2351	3133	2351	-3133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTACAGGAAAATGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	127671434	127646174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357
ENSMUSG00000027379.14_127646244_127671486_1	chr2	-	2639	21	ISM	ENSMUSG00000027379.14	ENSMUST00000028858.8	3421	25	2299	3202	2299	-3202	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACCGGCTTGGCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	127671486	127646243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357
ENSMUSG00000027384.7_140012778_140045552_1	chr2	+	900	11	FSM	ENSMUSG00000027384.7	ENSMUST00000044825.5	1166	11	209	57	209	-57	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTATGTTTCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	140012777	140045552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
ENSMUSG00000027384.7_140012840_140045553_1	chr2	+	839	11	FSM	ENSMUSG00000027384.7	ENSMUST00000044825.5	1166	11	271	56	271	-56	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTATGTTTCCCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	140012839	140045553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
ENSMUSG00000027386.10_128719317_128737407_1	chr2	+	856	7	FSM	ENSMUSG00000027386.10	ENST00000409903.5	1061	7	42	163	42	-163	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGAGGTTGACGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	128719316	128737407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_128719440_128722175_128722347_128731620_128731747_128734362_128734504_128735686_128735825_128736685_128736825_128737389
ENSMUSG00000027386.10_128719386_128737444_1	chr2	+	824	7	FSM	ENSMUSG00000027386.10	ENST00000409903.5	1061	7	111	126	111	-126	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCTCCTTCCAGGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	128719385	128737444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_128719440_128722175_128722347_128731620_128731747_128734362_128734504_128735686_128735825_128736685_128736825_128737389
ENSMUSG00000027386.10_128719410_128737549_1	chr2	+	905	7	FSM	ENSMUSG00000027386.10	ENST00000409903.5	1061	7	135	21	135	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATTTCACTTCCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	128719409	128737549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_128719440_128722175_128722347_128731620_128731747_128734362_128734504_128735686_128735825_128736685_128736825_128737389
ENSMUSG00000027386.10_128722173_128737571_1	chr2	+	900	6	ISM	ENSMUSG00000027386.10	ENST00000409903.5	1061	7	2898	-1	2898	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTGTGGGCAAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	128722172	128737571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_128722347_128731620_128731747_128734362_128734504_128735686_128735825_128736685_128736825_128737389
ENSMUSG00000027386.10_128722285_128737571_1	chr2	+	788	6	ISM	ENSMUSG00000027386.10	ENST00000409903.5	1061	7	3010	-1	3010	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTGTGGGCAAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	128722284	128737571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_128722347_128731620_128731747_128734362_128734504_128735686_128735825_128736685_128736825_128737389
ENSMUSG00000027387.12_128768548_128777314_1	chr2	-	788	7	ISM	ENSMUSG00000027387.12	ENSMUST00000028866.9	1624	9	8683	360	8683	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACATGTGTGCTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	128777314	128768547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777231
ENSMUSG00000027387.12_128772767_128785997_1	chr2	-	873	6	ISM	ENSMUSG00000027387.12	ENSMUST00000028866.9	1624	9	0	4579	0	-4579	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATTATGTACAAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	128785997	128772766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
ENSMUSG00000027397.15_129041536_129046062_1	chr2	+	760	4	ISM	ENSMUSG00000027397.15	ENSMUST00000110315.2	3219	10	306	7467	306	-7467	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGAGCACCGTGTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	129041535	129046062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_129041985_129042102_129042244_129042419_129042506_129045978
ENSMUSG00000027397.15_129051032_129053176_1	chr2	+	770	3	ISM	ENSMUSG00000027397.15	ENSMUST00000110315.2	3219	10	9802	353	9802	-353	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTAACTGAAGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	129051031	129053176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_129051144_129051791_129051877_129052603
ENSMUSG00000027399.2_129141972_129151018_1	chr2	-	1135	4	FSM	ENSMUSG00000027399.2	ENST00000263339.4	1148	4	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	905	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGGGTTTTCTAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	129151018	129141971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_129142785_129148383_129148613_129149802_129149852_129150974
ENSMUSG00000027400.12_129529914_129531797_1	chr2	-	762	2	NNC	ENSMUSG00000027400.12	novel	835	3	NA	NA	8621	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	690	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCCCCTCCATGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	129531797	129529913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_129530536_129531657
ENSMUSG00000027400.12_129529914_129540407_1	chr2	-	824	3	FSM	ENSMUSG00000027400.12	ENST00000217305.3	835	3	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCCCCTCCATGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	129540407	129529913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_129530536_129531656_129531798_129540346
ENSMUSG00000027400.12_129529914_129540407_2	chr2	-	819	3	NNC	ENSMUSG00000027400.12	novel	835	3	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCCCCTCCATGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	129540407	129529913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_129530536_129531656_129531798_129540351
ENSMUSG00000027403.13_129977765_129983131_1	chr2	+	617	5	ISM	ENSMUSG00000027403.13	ENST00000381423.1	2000	11	98	11919	98	-11919	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATATGGAGGTGGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	129977764	129983131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_129977844_129978348_129978592_129979295_129979415_129980747_129980877_129983084
ENSMUSG00000027403.13_129977815_129983192_1	chr2	+	628	5	ISM	ENSMUSG00000027403.13	ENST00000381423.1	2000	11	148	11858	148	-11858	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTCAAGGGCAGGTACAA	NA	NA	NA	NA	NA	NA	NA	NA	129977814	129983192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_129977844_129978348_129978592_129979295_129979415_129980747_129980877_129983084
ENSMUSG00000027403.13_129978417_129983731_1	chr2	+	640	5	ISM	ENSMUSG00000027403.13	ENST00000381423.1	2000	11	750	11319	750	-11319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCAACTCAGCCCACGAC	NA	NA	NA	NA	NA	NA	NA	NA	129978416	129983731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_129978592_129979295_129979415_129980747_129980877_129983084_129983263_129983692
ENSMUSG00000027403.13_129978485_129983772_1	chr2	+	613	5	ISM	ENSMUSG00000027403.13	ENST00000381423.1	2000	11	818	11278	818	-11278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAATATGTGGACTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	129978484	129983772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_129978592_129979295_129979415_129980747_129980877_129983084_129983263_129983692
ENSMUSG00000027403.13_129978540_129983831_1	chr2	+	617	5	ISM	ENSMUSG00000027403.13	ENST00000381423.1	2000	11	873	11219	873	-11219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTCCCAGGCCACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	129978539	129983831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_129978592_129979295_129979415_129980747_129980877_129983084_129983263_129983692
ENSMUSG00000027403.13_129979386_129985355_1	chr2	+	643	6	ISM	ENSMUSG00000027403.13	ENST00000381423.1	2000	11	1719	9695	1719	-9695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCCCCTTCGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	129979385	129985355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_129979415_129980747_129980877_129983084_129983263_129983692_129983832_129985120_129985225_129985291
ENSMUSG00000027403.13_129980813_129985459_1	chr2	+	653	5	ISM	ENSMUSG00000027403.13	ENST00000381423.1	2000	11	3146	9591	3146	-9591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTGCATCAGTACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	129980812	129985459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_129980877_129983084_129983263_129983692_129983832_129985120_129985225_129985291
ENSMUSG00000027403.13_129983117_129986883_1	chr2	+	646	5	ISM	ENSMUSG00000027403.13	ENST00000381423.1	2000	11	5450	8167	5450	-8167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGGTGTACAGCAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	129983116	129986883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_129983263_129983692_129983832_129985120_129985225_129985291_129985535_129986869
ENSMUSG00000027403.13_129983188_129986930_1	chr2	+	622	5	ISM	ENSMUSG00000027403.13	ENST00000381423.1	2000	11	5521	8120	5521	-8120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGGAGGAGGAGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	129983187	129986930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_129983263_129983692_129983832_129985120_129985225_129985291_129985535_129986869
ENSMUSG00000027403.13_129983238_129987005_1	chr2	+	647	5	ISM	ENSMUSG00000027403.13	ENST00000381423.1	2000	11	5571	8045	5571	-8045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCCAGCATCACTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	129983237	129987005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_129983263_129983692_129983832_129985120_129985225_129985291_129985535_129986869
ENSMUSG00000027403.13_129983789_129987125_1	chr2	+	646	4	ISM	ENSMUSG00000027403.13	ENST00000381423.1	2000	11	6122	7925	6122	-7925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGGCGCCACCATCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	129983788	129987125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_129983832_129985120_129985225_129985291_129985535_129986869
ENSMUSG00000027403.13_129985473_129994938_1	chr2	+	618	4	ISM	ENSMUSG00000027403.13	ENST00000381423.1	2000	11	7806	112	7806	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGGCCCCAGGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	129985472	129994938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_129985535_129986869_129987212_129993193_129993349_129994879
ENSMUSG00000027403.13_129986924_129995044_1	chr2	+	608	3	ISM	ENSMUSG00000027403.13	ENST00000381423.1	2000	11	9257	6	9257	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGGGAGGACTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	129986923	129995044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_129987212_129993193_129993349_129994879
ENSMUSG00000027404.17_130013555_130017361_1	chr2	-	697	5	ISM	ENSMUSG00000027404.17	ENST00000438552.6	831	6	1726	-19	1726	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCATTTGTCTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	130017361	130013554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130013722_130014522_130014649_130014955_130015095_130015526_130015680_130017249
ENSMUSG00000027404.17_130013555_130019015_1	chr2	-	920	6	ISM	ENSMUSG00000027404.17	ENSMUST00000103199.9	1161	7	2308	0	72	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCATTTGTCTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	130019015	130013554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018934
ENSMUSG00000027404.17_130013707_130019015_1	chr2	-	626	6	FSM	ENSMUSG00000027404.17	ENST00000438552.6	831	6	72	133	72	-133	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCCCTCCAAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	130019015	130013706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_130013722_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018934
ENSMUSG00000027404.17_130013707_130021254_1	chr2	-	940	7	FSM	ENSMUSG00000027404.17	ENSMUST00000103199.9	1161	7	69	152	69	-133	multi-exon	FALSE	canonical	NA	NA	NA	NA	4443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCCCTCCAAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	130021254	130013706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018934_130019087_130021153
ENSMUSG00000027404.17_130018568_130019015_1	chr2	-	186	2	FSM	ENSMUSG00000027404.17	ENST00000461548.1	257	2	72	-1	72	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGACCCTCTTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	130019015	130018567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_130018673_130018934
ENSMUSG00000027405.17_130116366_130121025_1	chr2	+	1653	12	FSM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	16	208	-9	-208	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCCACCACCCCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	130116365	130121025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ENSMUSG00000027405.17_130116576_130121173_1	chr2	+	1748	11	ISM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	226	60	201	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCAGCTCCTGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	130116575	130121173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ENSMUSG00000027405.17_130116583_130121173_1	chr2	+	1741	11	ISM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	233	60	208	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCAGCTCCTGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	130116582	130121173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ENSMUSG00000027405.17_130116589_130121173_1	chr2	+	1735	11	ISM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	239	60	214	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCAGCTCCTGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	130116588	130121173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ENSMUSG00000027405.17_130116629_130121173_1	chr2	+	1695	11	ISM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	279	60	254	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCAGCTCCTGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	130116628	130121173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ENSMUSG00000027406.14_130121229_130126412_1	chr2	-	1558	12	NNC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	130126412	130121228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123684_130123763_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ENSMUSG00000027406.14_130121229_130126412_2	chr2	-	1553	12	NNC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	130126412	130121228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123228_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ENSMUSG00000027406.14_130121229_130126412_3	chr2	-	1552	12	NNC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	130126412	130121228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123014_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ENSMUSG00000027406.14_130121229_130126412_4	chr2	-	1554	12	NNC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	865	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	130126412	130121228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125950_130126090_130126169_130126301
ENSMUSG00000027406.14_130121229_130126412_5	chr2	-	1558	12	NNC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	130126412	130121228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_130121647_130122182_130122237_130122372_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ENSMUSG00000027406.14_130121229_130126412_6	chr2	-	1554	12	NNC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	130126412	130121228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123684_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ENSMUSG00000027406.14_130121229_130126412_7	chr2	-	1556	12	NNC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1002	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	130126412	130121228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123824_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ENSMUSG00000027406.14_130121229_130126412_8	chr2	-	1554	12	NNC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	130126412	130121228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125864_130125957_130126090_130126169_130126301
ENSMUSG00000027406.14_130121229_130126467_1	chr2	-	1609	12	NNC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	130126467	130121228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_130121647_130122182_130122237_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ENSMUSG00000027411.18_130266324_130281574_1	chr2	+	925	10	ISM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	39	4615	39	-4008	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGATGGGGTCCGCATC	NA	NA	NA	NA	NA	NA	NA	NA	130266323	130281574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539
ENSMUSG00000027411.18_130279834_130282216_1	chr2	+	996	10	ISM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	13549	3973	13549	-3366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGCAGTGCATTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	130279833	130282216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150
ENSMUSG00000027411.18_130279834_130282929_1	chr2	+	904	9	ISM	ENSMUSG00000027411.18	ENST00000380469.7	2161	20	13588	2653	13549	-2653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGGCATGGGATATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	130279833	130282929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130282626_130282663_130282819
ENSMUSG00000027411.18_130280077_130283227_1	chr2	+	887	9	ISM	ENSMUSG00000027411.18	ENST00000380469.7	2161	20	13831	2355	13792	-2355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTTACCTTTCCCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	130280076	130283227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130282626_130282663_130282819_130282929_130283084
ENSMUSG00000027411.18_130280087_130282400_1	chr2	+	922	10	ISM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	13802	3789	13802	-3182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTTCCACCTGACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	130280086	130282400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371
ENSMUSG00000027411.18_130280486_130283625_1	chr2	+	875	9	ISM	ENSMUSG00000027411.18	ENST00000380469.7	2161	20	14240	1957	14201	-1957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGTGTGTGAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	130280485	130283625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527
ENSMUSG00000027411.18_130280586_130283227_1	chr2	+	1008	11	ISM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	14301	2962	14301	-2355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTTACCTTTCCCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	130280585	130283227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084
ENSMUSG00000027411.18_130280702_130283821_1	chr2	+	865	9	ISM	ENSMUSG00000027411.18	ENST00000380469.7	2161	20	14456	1761	14417	-1761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGAGGTCCAAAGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	130280701	130283821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130280826_130280965_130281022_130281355_130281446_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713
ENSMUSG00000027411.18_130280992_130283413_1	chr2	+	931	10	ISM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	14707	2776	14707	-2169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACCTGGGTGAGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	130280991	130283413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314
ENSMUSG00000027411.18_130281355_130283625_1	chr2	+	1010	10	ISM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	15070	2564	15070	-1957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGTGTGTGAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	130281354	130283625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527
ENSMUSG00000027411.18_130281355_130284280_1	chr2	+	790	9	ISM	ENSMUSG00000027411.18	ENST00000380469.7	2161	20	15109	1302	15070	-1302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGATACAGCGACGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	130281354	130284280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130281446_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254
ENSMUSG00000027411.18_130281550_130283821_1	chr2	+	1017	10	ISM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	15265	2368	15265	-1761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGAGGTCCAAAGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	130281549	130283821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713
ENSMUSG00000027411.18_130282371_130284424_1	chr2	+	972	9	ISM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	16086	1765	16086	-1158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTAAGGATTTCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	130282370	130284424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254
ENSMUSG00000027411.18_130282627_130284603_1	chr2	+	940	9	ISM	ENSMUSG00000027411.18	ENST00000380469.7	2161	20	16381	979	16342	-979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACAGGGCTCTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	130282626	130284603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506
ENSMUSG00000027411.18_130282817_130285319_1	chr2	+	1011	9	ISM	ENSMUSG00000027411.18	ENST00000380469.7	2161	20	16571	263	16532	-263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTAGATGAAGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	130282816	130285319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215
ENSMUSG00000027411.18_130283139_130285510_1	chr2	+	922	9	ISM	ENSMUSG00000027411.18	ENST00000380469.7	2161	20	16893	72	16854	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCCACAGATGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	130283138	130285510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ENSMUSG00000027411.18_130283744_130285830_1	chr2	+	924	6	ISM	ENSMUSG00000027411.18	ENST00000380469.7	2161	20	17498	-248	17459	248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGGTGTGGTGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	130283743	130285830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ENSMUSG00000027411.18_130284309_130286040_1	chr2	+	924	4	ISM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	18024	149	18024	-149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGGCTTTTGCCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	130284308	130286040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130284425_130284506_130284604_130285215_130285320_130285433
ENSMUSG00000027411.18_130284350_130286189_1	chr2	+	1032	4	ISM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	18065	0	18065	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTAGGTTGTGTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	130284349	130286189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130284425_130284506_130284604_130285215_130285320_130285433
ENSMUSG00000027419.10_143388191_143626488_1	chr2	+	862	7	ISM	ENSMUSG00000027419.10	ENST00000536609.1	2307	11	61	29460	61	-29460	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCTCCTCCATCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	143388190	143626488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143388585_143529483_143529598_143532246_143532356_143538576_143538615_143591044_143591122_143615820_143615910_143626447
ENSMUSG00000027419.10_143388191_143626539_1	chr2	+	913	7	ISM	ENSMUSG00000027419.10	ENST00000536609.1	2307	11	61	29409	61	-29409	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGGGCCCCACAGACAA	NA	NA	NA	NA	NA	NA	NA	NA	143388190	143626539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143388585_143529483_143529598_143532246_143532356_143538576_143538615_143591044_143591122_143615820_143615910_143626447
ENSMUSG00000027419.10_143388423_143635075_1	chr2	+	832	8	ISM	ENSMUSG00000027419.10	ENST00000536609.1	2307	11	293	20873	293	-20873	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGACGGCTATGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	143388422	143635075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143388585_143529483_143529598_143532246_143532356_143538576_143538615_143591044_143591122_143615820_143615910_143626447_143626624_143635008
ENSMUSG00000027419.10_143388481_143635119_1	chr2	+	818	8	ISM	ENSMUSG00000027419.10	ENST00000536609.1	2307	11	351	20829	351	-20829	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCATCAATGATGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	143388480	143635119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143388585_143529483_143529598_143532246_143532356_143538576_143538615_143591044_143591122_143615820_143615910_143626447_143626624_143635008
ENSMUSG00000027419.10_143388527_143635182_1	chr2	+	835	8	ISM	ENSMUSG00000027419.10	ENST00000536609.1	2307	11	397	20766	397	-20766	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCAGCAATGGGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	143388526	143635182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143388585_143529483_143529598_143532246_143532356_143538576_143538615_143591044_143591122_143615820_143615910_143626447_143626624_143635008
ENSMUSG00000027419.10_143529482_143637964_1	chr2	+	922	8	ISM	ENSMUSG00000027419.10	ENST00000536609.1	2307	11	141352	17984	141352	-17984	internal_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTCACTTTGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	143529481	143637964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143529598_143532246_143532356_143538576_143538615_143591044_143591122_143615820_143615910_143626447_143626624_143635008_143635225_143637863
ENSMUSG00000027419.10_143532282_143642986_1	chr2	+	834	8	ISM	ENSMUSG00000027419.10	ENST00000536609.1	2307	11	144152	12962	144152	-12962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGATGAGGTTCATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	143532281	143642986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143532356_143538576_143538615_143591044_143591122_143615820_143615910_143626447_143626624_143635008_143635225_143637863_143637965_143642923
ENSMUSG00000027419.10_143532330_143643053_1	chr2	+	853	8	ISM	ENSMUSG00000027419.10	ENST00000536609.1	2307	11	144200	12895	144200	-12895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCCTTGATGCAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	143532329	143643053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143532356_143538576_143538615_143591044_143591122_143615820_143615910_143626447_143626624_143635008_143635225_143637863_143637965_143642923
ENSMUSG00000027419.10_143615875_143655301_1	chr2	+	813	6	ISM	ENSMUSG00000027419.10	ENST00000536609.1	2307	11	227745	647	227745	-647	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAAAACTTCGTCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	143615874	143655301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143615910_143626447_143626624_143635008_143635225_143637863_143637965_143642923_143643152_143655244
ENSMUSG00000027419.10_143626538_143655429_1	chr2	+	816	5	ISM	ENSMUSG00000027419.10	ENST00000536609.1	2307	11	238408	519	238408	-519	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCAGAGACGACGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	143626537	143655429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143626624_143635008_143635225_143637863_143637965_143642923_143643152_143655244
ENSMUSG00000027419.10_143635121_143655626_1	chr2	+	815	4	ISM	ENSMUSG00000027419.10	ENST00000536609.1	2307	11	246991	322	246991	-322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGATTACCAGTCTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	143635120	143655626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143635225_143637863_143637965_143642923_143643152_143655244
ENSMUSG00000027419.10_143637894_143655776_1	chr2	+	831	3	ISM	ENSMUSG00000027419.10	ENST00000536609.1	2307	11	249764	172	249764	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGCTCCACAGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	143637893	143655776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143637965_143642923_143643152_143655244
ENSMUSG00000027419.10_143637946_143655834_1	chr2	+	837	3	ISM	ENSMUSG00000027419.10	ENST00000536609.1	2307	11	249816	114	249816	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAGCAATCCCAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	143637945	143655834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143637965_143642923_143643152_143655244
ENSMUSG00000027419.10_143643024_143655937_1	chr2	+	821	2	ISM	ENSMUSG00000027419.10	ENST00000536609.1	2307	11	254894	11	254894	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAACATCTATGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	143643023	143655937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_143643152_143655244
ENSMUSG00000027422.16_143789806_143791656_1	chr2	-	352	4	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	61527	491	61527	-491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGGCAAACTGTTCAACTT	NA	NA	NA	NA	NA	NA	NA	NA	143791656	143789805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591
ENSMUSG00000027422.16_143790281_143792415_1	chr2	-	370	4	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	60768	966	60768	-966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTACAAGAACAACTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	143792415	143790280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_143790400_143791189_143791289_143791591_143791676_143792347
ENSMUSG00000027422.16_143809418_143811456_1	chr2	-	342	3	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	41727	20103	41727	18355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGAAGGCGCTGGAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	143811456	143809417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_143809514_143810436_143810556_143811329
ENSMUSG00000027422.16_143810500_143816409_1	chr2	-	361	4	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	36774	21185	36774	17273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAGGAGAACTCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	143816409	143810499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_143810556_143811329_143811483_143815388_143815512_143816380
ENSMUSG00000027422.16_143815446_143830202_1	chr2	-	350	3	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	22981	26131	22981	12327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACAGAGCAAGAGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	143830202	143815445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_143815512_143816380_143816530_143830067
ENSMUSG00000027422.16_143816416_143830308_1	chr2	-	355	2	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	22875	27101	22875	11357	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGACTGGAGTCATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	143830308	143816415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_143816530_143830067
ENSMUSG00000027422.16_143827773_143830463_1	chr2	-	713	2	ISM	ENSMUSG00000027422.16	ENSMUST00000037875.6	2701	3	22720	0	22720	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGGAAGAGTCGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	143830463	143827772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_143828090_143830067
ENSMUSG00000027422.16_143827935_143830626_1	chr2	-	714	2	ISM	ENSMUSG00000027422.16	ENSMUST00000037875.6	2701	3	22557	162	22557	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGATGTTGCAGTAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	143830626	143827934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_143828090_143830067
ENSMUSG00000027422.16_143831573_143853000_1	chr2	-	696	2	ISM	ENSMUSG00000027422.16	ENSMUST00000037875.6	2701	3	183	3800	183	-3800	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAGGGACAGGGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	143853000	143831572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_143832187_143852918
ENSMUSG00000027423.16_144093036_144097481_1	chr2	-	629	7	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	15011	993	15011	-993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAGCTTTGACTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	144097481	144093035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418
ENSMUSG00000027423.16_144094365_144099115_1	chr2	-	651	7	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	13377	2322	13377	-2322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGATTCTCACAGGC	NA	NA	NA	NA	NA	NA	NA	NA	144099115	144094364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019
ENSMUSG00000027423.16_144095645_144101010_1	chr2	-	660	8	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	11482	3602	11482	-3602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGACTCATCAGCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	144101010	144095644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976
ENSMUSG00000027423.16_144096823_144102755_1	chr2	-	675	7	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	9737	4780	9737	-4780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAAGTTTTGTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	144102755	144096822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644
ENSMUSG00000027423.16_144097419_144103944_1	chr2	-	664	6	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	8548	5376	8548	-5376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATATGTTTACCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	144103944	144097418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839
ENSMUSG00000027423.16_144099012_144112379_1	chr2	-	649	6	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	113	6969	113	-6969	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTTTGAGAAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	144112379	144099011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ENSMUSG00000027423.16_144099785_144112492_1	chr2	-	663	5	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	0	7742	0	-7742	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTTCTATTTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	144112492	144099784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ENSMUSG00000027424.12_144120953_144121957_1	chr2	+	651	2	ISM	ENSMUSG00000027424.12	ENSMUST00000110027.2	2359	5	8092	479	8092	-479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGAGAGAGAGAGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	144120952	144121957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144121047_144121400
ENSMUSG00000027427.14_144369700_144377100_1	chr2	+	1607	5	FSM	ENSMUSG00000027427.14	ENSMUST00000110017.3	1632	5	32	-7	32	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATATAACCAGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	144369699	144377100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144375893
ENSMUSG00000027427.14_144378233_144382045_1	chr2	+	1784	3	ISM	ENSMUSG00000027427.14	ENSMUST00000028914.9	4403	9	8595	1870	8565	-1870	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTGGAGGGAAAAAAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	144378232	144382045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144378311_144379085_144379278_144380531
ENSMUSG00000027428.10_144385287_144389939_1	chr2	-	755	3	ISM	ENSMUSG00000027428.10	ENSMUST00000028915.6	2170	5	2850	1102	2850	-1102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGATGCAATCTACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	144389939	144385286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_144385930_144386293_144386380_144389913
ENSMUSG00000027428.10_144385332_144390001_1	chr2	-	772	3	ISM	ENSMUSG00000027428.10	ENSMUST00000028915.6	2170	5	2788	1147	2788	-1147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTCTCCTGAGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	144390001	144385331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_144385930_144386293_144386380_144389913
ENSMUSG00000027428.10_144385498_144392710_1	chr2	-	778	5	FSM	ENSMUSG00000027428.10	ENSMUST00000028915.6	2170	5	79	1313	79	-1313	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGGACACAGAGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	144392710	144385497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_144385930_144386293_144386380_144389913_144390020_144391023_144391067_144392599
ENSMUSG00000027429.17_144398201_144404103_1	chr2	+	349	3	ISM	ENSMUSG00000027429.17	ENSMUST00000028916.15	2779	20	25	28566	25	-28518	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTATGTTGTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	144398200	144404103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144398263_144401126_144401362_144404051
ENSMUSG00000027429.17_144401179_144410602_1	chr2	+	809	7	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	54	22019	54	-22019	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGTGGTTGGAGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	144401178	144410602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144401362_144404051_144404110_144406485_144406573_144408736_144408920_144409020_144409107_144409802_144409948_144410535
ENSMUSG00000027429.17_144401310_144411110_1	chr2	+	861	8	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	185	21511	185	-21511	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTGCTGTCCAAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	144401309	144411110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144401362_144404051_144404110_144406485_144406573_144408736_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019
ENSMUSG00000027429.17_144404051_144408919_1	chr2	+	383	3	ISM	ENSMUSG00000027429.17	ENSMUST00000028916.15	2779	20	5875	23750	2926	-23702	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGTGCCTTATAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	144404050	144408919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144404110_144406485_144406573_144408682
ENSMUSG00000027429.17_144406482_144414522_1	chr2	+	904	7	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	5357	18099	5357	-18099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGTGGGCTTTTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	144406481	144414522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144406573_144408736_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398
ENSMUSG00000027429.17_144408735_144416667_1	chr2	+	896	7	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	7610	15954	7610	-15954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAAAACCCCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	144408734	144416667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586
ENSMUSG00000027429.17_144408879_144420306_1	chr2	+	807	8	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	7754	12315	7754	-12315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCTTGGCATCTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	144408878	144420306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251
ENSMUSG00000027429.17_144409800_144423896_1	chr2	+	858	8	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	8675	8725	8675	-8725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCAGCATTTGACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	144409799	144423896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863
ENSMUSG00000027429.17_144409874_144423951_1	chr2	+	839	8	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	8749	8670	8749	-8670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGCGCAGAGTCAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	144409873	144423951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863
ENSMUSG00000027429.17_144410534_144425688_1	chr2	+	911	8	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	9409	6933	9409	-6933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAGAAATATGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	144410533	144425688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610
ENSMUSG00000027429.17_144411066_144427590_1	chr2	+	777	8	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	9941	5031	9941	-5031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCATTTTGCCCGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	144411065	144427590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517
ENSMUSG00000027429.17_144414398_144428380_1	chr2	+	884	8	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	13273	4241	13273	-4241	internal_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGTGTCATCCGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	144414397	144428380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293
ENSMUSG00000027429.17_144420252_144429487_1	chr2	+	900	8	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	19127	3134	19127	-3134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCTTGTGGGGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	144420251	144429487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421
ENSMUSG00000027429.17_144421214_144432283_1	chr2	+	891	8	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	20089	338	20089	-338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCTCTTAAGCTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	144421213	144432283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ENSMUSG00000027429.17_144425629_144432489_1	chr2	+	815	6	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	24504	132	24504	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATGAAATTATATGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	144425628	144432489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ENSMUSG00000027430.13_144441932_144477752_1	chr2	+	482	4	ISM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	115	132926	115	-132926	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGAGCTGCTAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	144441931	144477752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144442012_144445707_144445799_144459111_144459348_144477677
ENSMUSG00000027430.13_144459218_144610205_1	chr2	+	485	4	ISM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	17401	473	17401	-473	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTCAAATATGAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	144459217	144610205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144459348_144477677_144477785_144588820_144588994_144610130
ENSMUSG00000027430.13_144459276_144610255_1	chr2	+	477	4	ISM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	17459	423	17459	-423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCTGCAGAAAAACACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	144459275	144610255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_144459348_144477677_144477785_144588820_144588994_144610130
ENSMUSG00000027433.6_146855058_146869285_1	chr2	+	619	7	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	142	50635	142	-50635	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAGACAAAGAGGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	146855057	146869285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226
ENSMUSG00000027433.6_146866499_146870058_1	chr2	+	600	8	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	11583	49862	11583	-49862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAATCAGAGAAGAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	146866498	146870058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012
ENSMUSG00000027433.6_146866635_146870170_1	chr2	+	655	7	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	11719	49750	11719	-49750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGCTTTAAGATAGAC	NA	NA	NA	NA	NA	NA	NA	NA	146866634	146870170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012
ENSMUSG00000027433.6_146867168_146871433_1	chr2	+	584	8	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	12252	48487	12252	-48487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGCCAGCTTACCATTC	NA	NA	NA	NA	NA	NA	NA	NA	146867167	146871433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414
ENSMUSG00000027433.6_146868299_146871548_1	chr2	+	642	7	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	13383	48372	13383	-48372	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGAATCTGTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	146868298	146871548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414
ENSMUSG00000027433.6_146868435_146871704_1	chr2	+	639	7	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	13519	48216	13519	-48216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTTATTCTTGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	146868434	146871704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646
ENSMUSG00000027433.6_146869227_146871896_1	chr2	+	657	7	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	14311	48024	14311	-48024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATACATTGTAGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	146869226	146871896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788
ENSMUSG00000027433.6_146870064_146878653_1	chr2	+	597	7	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	15148	41267	15148	-41267	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCAAGTAGCCAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	146870063	146878653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583
ENSMUSG00000027433.6_146870110_146878715_1	chr2	+	613	7	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	15194	41205	15194	-41205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGCTTACTACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	146870109	146878715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583
ENSMUSG00000027433.6_146871291_146880207_1	chr2	+	638	7	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	16375	39713	16375	-39713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAAGCCTTTTTTTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	146871290	146880207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088
ENSMUSG00000027433.6_146871472_146882794_1	chr2	+	598	7	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	16556	37126	16556	-37126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATGAGAAATTCCGACGT	NA	NA	NA	NA	NA	NA	NA	NA	146871471	146882794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735
ENSMUSG00000027433.6_146871472_146882871_1	chr2	+	675	7	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	16556	37049	16556	-37049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCAAAAGAAGTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	146871471	146882871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735
ENSMUSG00000027433.6_146871788_146884015_1	chr2	+	649	6	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	16872	35905	16872	-35905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCTTCAAGTCAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	146871787	146884015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907
ENSMUSG00000027433.6_146876772_146884183_1	chr2	+	632	6	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	21856	35737	21856	-35737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTTAGTGTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	146876771	146884183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093
ENSMUSG00000027433.6_146878675_146889591_1	chr2	+	604	7	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	23759	30329	23759	-30329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAGCGGCTCTAGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	146878674	146889591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554
ENSMUSG00000027433.6_146880141_146891242_1	chr2	+	589	7	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	25225	28678	25225	-28678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGGGAAAACTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	146880140	146891242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211
ENSMUSG00000027433.6_146882734_146891982_1	chr2	+	671	7	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	27818	27938	27818	-27938	internal_fragment	TRUE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGACCCACTTGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	146882733	146891982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902
ENSMUSG00000027433.6_146883967_146903208_1	chr2	+	571	8	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	29051	16712	29051	-16712	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGCTGCAATGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	146883966	146903208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168
ENSMUSG00000027433.6_146884817_146905201_1	chr2	+	605	8	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	29901	14719	29901	-14719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCACCTGCCAATTACCA	NA	NA	NA	NA	NA	NA	NA	NA	146884816	146905201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152
ENSMUSG00000027433.6_146889553_146905280_1	chr2	+	650	7	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	34637	14640	34637	-14640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTTTACTGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	146889552	146905280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152
ENSMUSG00000027433.6_146893664_146919430_1	chr2	+	589	7	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	38748	490	38748	-490	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCACCACCCTCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	146893663	146919430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ENSMUSG00000027433.6_146903360_146919602_1	chr2	+	632	5	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	48444	318	48444	-318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTGATCTGATCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	146903359	146919602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ENSMUSG00000027433.6_146903360_146919635_1	chr2	+	665	5	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	48444	285	48444	-285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGAGATGTGTATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	146903359	146919635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ENSMUSG00000027433.6_146905245_146919784_1	chr2	+	624	4	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	50329	136	50329	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACATTGAGCTGCACATT	NA	NA	NA	NA	NA	NA	NA	NA	146905244	146919784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146905281_146910711_146910776_146916804_146916947_146919402
ENSMUSG00000027433.6_146916803_146919920_1	chr2	+	662	2	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	61887	0	61887	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	146916802	146919920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146916947_146919402
ENSMUSG00000027438.15_148538576_148574392_1	chr2	-	1693	10	NNC	ENSMUSG00000027438.15	novel	1699	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAACCATCTTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	148574392	148538575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_148539421_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148551236_148551354_148554594_148554675_148574185
ENSMUSG00000027438.15_148538576_148574392_2	chr2	-	1699	10	FSM	ENSMUSG00000027438.15	ENST00000398425.7	1699	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAACCATCTTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	148574392	148538575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148551236_148551354_148554594_148554675_148574185
ENSMUSG00000027438.15_148538576_148574392_3	chr2	-	1694	10	NNC	ENSMUSG00000027438.15	novel	1699	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAACCATCTTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	148574392	148538575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548939_148551236_148551354_148554594_148554675_148574185
ENSMUSG00000027438.15_148538754_148574311_1	chr2	-	1370	10	FSM	ENSMUSG00000027438.15	ENST00000432543.6	1629	10	81	178	76	-178	multi-exon	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCTGTTTGTTTGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	148574311	148538753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148549078_148549126_148554594_148554675_148574185
ENSMUSG00000027438.15_148538796_148574311_1	chr2	-	1328	10	FSM	ENSMUSG00000027438.15	ENST00000432543.6	1629	10	81	220	76	-220	multi-exon	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGGATCTGCTAACATC	NA	NA	NA	NA	NA	NA	NA	NA	148574311	148538795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148549078_148549126_148554594_148554675_148574185
ENSMUSG00000027438.15_148538867_148574333_1	chr2	-	1279	10	FSM	ENSMUSG00000027438.15	ENST00000432543.6	1629	10	59	291	54	-291	multi-exon	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAAGGTGTTAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	148574333	148538866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148549078_148549126_148554594_148554675_148574185
ENSMUSG00000027438.15_148538872_148574333_1	chr2	-	1274	10	FSM	ENSMUSG00000027438.15	ENST00000432543.6	1629	10	59	296	54	-296	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTACTTTGAAGGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	148574333	148538871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148549078_148549126_148554594_148554675_148574185
ENSMUSG00000027439.10_148526254_148533435_1	chr2	+	1865	5	ISM	ENSMUSG00000027439.10	ENSMUST00000028928.8	4232	6	3311	1434	3311	-1434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTTCCTGAGATAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	148526253	148533435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
ENSMUSG00000027455.17_151338502_151352909_1	chr2	+	930	8	ISM	ENSMUSG00000027455.17	ENSMUST00000028949.16	1364	9	2289	316	2278	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGAGCTGGCTGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	151338501	151352909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_151338602_151342634_151342710_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ENSMUSG00000027455.17_151342633_151345099_1	chr2	+	251	2	NNC	ENSMUSG00000027455.17	novel	1369	8	NA	NA	6409	-8126	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCATAAGGGTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	151342632	151345099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_151342716_151344931
ENSMUSG00000027455.17_151345050_151348190_1	chr2	+	277	4	ISM	ENSMUSG00000027455.17	ENSMUST00000028949.16	1364	9	8837	5035	8826	-5035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCGCATGGTGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	151345049	151348190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_151345100_151346030_151346124_151347272_151347383_151348166
ENSMUSG00000027455.17_151345066_151353182_1	chr2	+	896	6	ISM	ENSMUSG00000027455.17	ENSMUST00000028949.16	1364	9	8853	43	8842	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACTTTAAAGAAAAAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	151345065	151353182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ENSMUSG00000027459.17_151811549_151821966_1	chr2	-	1350	2	FSM	ENSMUSG00000027459.17	ENSMUST00000062047.6	1754	2	173	231	173	108	multi-exon	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTCTTCCCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	151821966	151811548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_151812845_151821912
ENSMUSG00000027459.17_151811549_151822139_1	chr2	-	1523	2	FSM	ENSMUSG00000027459.17	ENSMUST00000062047.6	1754	2	0	231	0	108	multi-exon	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTCTTCCCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	151822139	151811548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_151812845_151821912
ENSMUSG00000027459.17_151811657_151822139_1	chr2	-	1415	2	FSM	ENSMUSG00000027459.17	ENSMUST00000062047.6	1754	2	0	339	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTGTGCTTCTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	151822139	151811656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_151812845_151821912
ENSMUSG00000027460.8_151753130_151786856_1	chr2	+	1934	9	FSM	ENSMUSG00000027460.8	ENSMUST00000028955.6	2335	9	0	401	0	-401	multi-exon	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCCCTCAGAGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	151753129	151786856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_151753588_151767306_151767463_151768983_151769106_151771299_151771539_151776326_151776443_151778586_151778689_151780824_151780992_151785223_151785355_151786413
ENSMUSG00000027460.8_151767318_151787257_1	chr2	+	1866	8	ISM	ENSMUSG00000027460.8	ENSMUST00000028955.6	2335	9	14188	0	14188	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTGTCAGCGTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	151767317	151787257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_151767463_151768983_151769106_151771299_151771539_151776326_151776443_151778586_151778689_151780824_151780992_151785223_151785355_151786413
ENSMUSG00000027463.15_151846043_151850068_1	chr2	+	1393	4	FSM	ENSMUSG00000027463.15	ENST00000645534.1	1395	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGTAGGCTCACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	151846042	151850068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_151846632_151847462_151847940_151849400_151849525_151849865
ENSMUSG00000027463.15_151846043_151850068_2	chr2	+	1388	4	NNC	ENSMUSG00000027463.15	novel	1395	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGTAGGCTCACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	151846042	151850068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_151846627_151847462_151847940_151849400_151849525_151849865
ENSMUSG00000027466.16_152158254_152174085_1	chr2	-	2137	12	FSM	ENSMUSG00000027466.16	ENSMUST00000109847.9	2384	12	247	0	247	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	152174085	152158253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ENSMUSG00000027466.16_152158254_152174195_1	chr2	-	2247	12	FSM	ENSMUSG00000027466.16	ENSMUST00000109847.9	2384	12	137	0	137	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	152174195	152158253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ENSMUSG00000027466.16_152158254_152174195_2	chr2	-	2240	12	NNC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	137	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1017	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	152174195	152158253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_152158828_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ENSMUSG00000027466.16_152158400_152174304_1	chr2	-	2210	12	FSM	ENSMUSG00000027466.16	ENSMUST00000109847.9	2384	12	28	146	28	-146	multi-exon	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGCCTTGCTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	152174304	152158399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ENSMUSG00000027466.16_152158400_152174311_1	chr2	-	2217	12	FSM	ENSMUSG00000027466.16	ENSMUST00000109847.9	2384	12	21	146	21	-146	multi-exon	FALSE	canonical	NA	NA	NA	NA	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGCCTTGCTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	152174311	152158399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ENSMUSG00000027466.16_152158715_152174085_1	chr2	-	1515	11	FSM	ENSMUSG00000027466.16	ENST00000640614.1	1814	11	299	0	247	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCAGTGAACAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	152174085	152158714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ENSMUSG00000027466.16_152160232_152174195_1	chr2	-	1505	10	ISM	ENSMUSG00000027466.16	ENST00000640614.1	1814	11	189	1517	137	-1517	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCTTCGGGGTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	152174195	152160231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ENSMUSG00000027466.16_152160700_152174311_1	chr2	-	1410	9	ISM	ENSMUSG00000027466.16	ENST00000640614.1	1814	11	73	1985	21	-1985	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGACGACCTGGCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	152174311	152160699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_152160732_152161043_152161224_152164079_152164192_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ENSMUSG00000027469.17_152696839_152736574_1	chr2	+	3350	17	ISM	ENSMUSG00000027469.17	ENSMUST00000178997.8	4161	18	6955	667	6924	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTCTTGTTGTCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	152696838	152736574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUSG00000027470.10_152755443_152764491_1	chr2	+	1653	10	ISM	ENSMUSG00000027470.10	ENSMUST00000028970.8	2951	12	2171	497	2171	-497	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCAGGGGTCAGAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	152755442	152764491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152755661_152757049_152757156_152757576_152757671_152759253_152759364_152759444_152759587_152761068_152761140_152761244_152761374_152762205_152762359_152762440_152762574_152763994
ENSMUSG00000027472.15_152850810_152857262_1	chr2	-	1188	5	FSM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	85	0	85	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGTTGTCACCCACC	NA	NA	NA	NA	NA	NA	NA	NA	152857262	152850809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857153
ENSMUSG00000027472.15_152850810_152857262_2	chr2	-	1182	5	NNC	ENSMUSG00000027472.15	novel	1273	5	NA	NA	85	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGTTGTCACCCACC	NA	NA	NA	NA	NA	NA	NA	NA	152857262	152850809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_152851657_152852177_152852253_152854300_152854376_152855929_152856006_152857153
ENSMUSG00000027479.15_153583194_153610434_1	chr2	+	2540	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	0	4796	0	-4796	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTACTTTAAACAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	153583193	153610434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ENSMUSG00000027479.15_153583194_153610480_1	chr2	+	2586	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	0	4750	0	-4750	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGTCTTCTGAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	153583193	153610480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ENSMUSG00000027479.15_153583315_153610542_1	chr2	+	2527	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	121	4688	121	-4688	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGCATCCATCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	153583314	153610542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ENSMUSG00000027479.15_153597846_153610761_1	chr2	+	2602	5	ISM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	14652	4469	14652	-4469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTGGCCTCATATTTG	NA	NA	NA	NA	NA	NA	NA	NA	153597845	153610761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ENSMUSG00000027479.15_153603453_153611131_1	chr2	+	2616	3	ISM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	20259	4099	20259	-4099	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGAGAATGAGTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	153603452	153611131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_153603578_153606866_153607020_153608793
ENSMUSG00000027482.13_153972256_153979557_1	chr2	+	768	5	NNC	ENSMUSG00000027482.13	novel	1107	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGAGTGTTGATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	153972255	153979557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_153972583_153975558_153975710_153978185_153978336_153979034_153979115_153979497
ENSMUSG00000027482.13_153972256_153979557_2	chr2	+	773	5	FSM	ENSMUSG00000027482.13	ENST00000375452.3	765	5	-7	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGAGTGTTGATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	153972255	153979557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_153972583_153975558_153975710_153978185_153978336_153979034_153979120_153979497
ENSMUSG00000027487.12_154184221_154195183_1	chr2	-	650	6	ISM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	19456	6915	19456	-6915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTCCTTGAGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	154195183	154184220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109
ENSMUSG00000027487.12_154195270_154210794_1	chr2	-	602	6	ISM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	3845	17964	3845	7900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCAGGGTCTGCTAACC	NA	NA	NA	NA	NA	NA	NA	NA	154210794	154195269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731
ENSMUSG00000027487.12_154196061_154212701_1	chr2	-	667	6	ISM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	1938	18755	1938	7109	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGGCCAGTTGCCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	154212701	154196060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555
ENSMUSG00000027487.12_154202612_154212841_1	chr2	-	602	5	ISM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	1798	25306	1798	558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGAGACCTTCCCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	154212841	154202611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555
ENSMUSG00000027488.13_154218233_154245827_1	chr2	-	1711	7	ISM	ENSMUSG00000027488.13	ENSMUST00000109728.8	2131	8	4192	0	4174	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCTGTGGTTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	154245827	154218232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154218829_154218926_154219115_154219927_154220125_154222593_154222725_154222830_154223039_154225699_154225905_154245641
ENSMUSG00000027488.13_154218550_154249900_1	chr2	-	1695	8	FSM	ENSMUSG00000027488.13	ENSMUST00000109728.8	2131	8	119	317	101	-317	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTACTGCTCACCTCCACC	NA	NA	NA	NA	NA	NA	NA	NA	154249900	154218549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_154218829_154218926_154219115_154219927_154220125_154222593_154222725_154222830_154223039_154225699_154225905_154245641_154245828_154249599
ENSMUSG00000027489.16_154386319_154389482_1	chr2	-	1520	7	ISM	ENSMUSG00000027489.16	ENST00000246190.11	1731	10	8131	-22	8131	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCCCCTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	154389482	154386318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388801_154388956_154389076_154389344
ENSMUSG00000027489.16_154386420_154397544_2	chr2	-	1583	10	FSM	ENSMUSG00000027489.16	ENST00000246190.11	1731	10	69	79	69	-79	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTGCTGCCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	154397544	154386419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388801_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503
ENSMUSG00000027490.18_154402020_154403051_1	chr2	-	937	2	ISM	ENSMUSG00000027490.18	ENSMUST00000000894.6	2755	7	8589	466	8589	-466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGAGCACTGCTTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	154403051	154402019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154402856_154402950
ENSMUSG00000027490.18_154402522_154405946_1	chr2	-	954	5	ISM	ENSMUSG00000027490.18	ENSMUST00000000894.6	2755	7	5694	968	5694	-968	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGAATAGCACGATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	154405946	154402521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814
ENSMUSG00000027490.18_154403041_154411226_1	chr2	-	949	6	ISM	ENSMUSG00000027490.18	ENSMUST00000000894.6	2755	7	414	1487	414	-1487	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTCTGGCCCAGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	154411226	154403040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154410986
ENSMUSG00000027495.5_172187591_172195972_1	chr2	+	1814	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	106	1697	106	-1697	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAACATAGCCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	172187590	172195972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_172187768_172193374_172193545_172194505
ENSMUSG00000027495.5_172193487_172196332_1	chr2	+	1885	2	ISM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	6002	1337	6002	-1337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACTCCATCCCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	172193486	172196332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172193545_172194505
ENSMUSG00000027498.15_172214908_172217713_1	chr2	+	298	2	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	2254	6655	2254	-6655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGCCGCGTGGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	172214907	172217713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172215050_172217557
ENSMUSG00000027498.15_172214978_172217778_1	chr2	+	293	2	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	2324	6590	2324	-6590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATAAAGATACTGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	172214977	172217778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172215050_172217557
ENSMUSG00000027498.15_172217607_172218031_1	chr2	+	289	2	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	4953	6337	4953	-6337	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGACCACGTGGATGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	172217606	172218031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172217836_172217971
ENSMUSG00000027498.15_172217787_172219587_1	chr2	+	299	3	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	5133	4781	5133	-4781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGGAACTCAGCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	172217786	172219587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172217836_172217971_172218170_172219535
ENSMUSG00000027498.15_172218062_172219738_1	chr2	+	311	2	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	5408	4630	5408	-4630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTGCATCAAGCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	172218061	172219738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172218170_172219535
ENSMUSG00000027498.15_172218125_172219792_1	chr2	+	302	2	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	5471	4576	5471	-4576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCTCACGATGGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	172218124	172219792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172218170_172219535
ENSMUSG00000027498.15_172219685_172222331_1	chr2	+	294	2	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	7031	2037	7031	-2037	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGGACTATATTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	172219684	172222331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172219927_172222279
ENSMUSG00000027498.15_172219738_172222386_1	chr2	+	296	2	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	7084	1982	7084	-1982	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCCAGGACAGCTGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	172219737	172222386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172219927_172222279
ENSMUSG00000027498.15_172219778_172222463_1	chr2	+	333	2	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	7124	1905	7124	-1905	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAACCCTGGCTTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	172219777	172222463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172219927_172222279
ENSMUSG00000027499.13_7502400_7508866_1	chr3	+	1972	2	ISM	ENSMUSG00000027499.13	ENSMUST00000193330.2	631	3	8282	-1393	8282	1393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATAGACTCAAAGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	7502399	7508866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_7502576_7507070
ENSMUSG00000027500.11_8574420_8620043_1	chr3	+	732	4	ISM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	0	6623	0	-6623	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGCAGCAGAGGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	8574419	8620043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851
ENSMUSG00000027500.11_8574575_8625489_1	chr3	+	741	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	155	1177	155	-1177	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACTCATTATGAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	8574574	8625489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
ENSMUSG00000027500.11_8619850_8625791_1	chr3	+	660	2	ISM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	45430	875	45430	-875	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACAGTCTATGGTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	8619849	8625791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_8620044_8625325
ENSMUSG00000027500.11_8619888_8625855_1	chr3	+	686	2	ISM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	45468	811	45468	-811	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGTGACCAAGACCACACC	NA	NA	NA	NA	NA	NA	NA	NA	8619887	8625855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_8620044_8625325
ENSMUSG00000027500.11_8619958_8625914_1	chr3	+	675	2	ISM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	45538	752	45538	-752	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCGTAATCTGCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	8619957	8625914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_8620044_8625325
ENSMUSG00000027500.11_8619974_8625927_1	chr3	+	669	2	NNC	ENSMUSG00000027500.11	novel	2073	5	NA	NA	45554	-739	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCTGCCTAGAAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	8619973	8625927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_8620044_8625328
ENSMUSG00000027502.12_172282476_172311828_1	chr2	+	2164	9	NNC	ENSMUSG00000027502.12	novel	2173	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2021	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGGGTTGGTTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	172282475	172311828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308202_172308252_172308348_172308445_172310515
ENSMUSG00000027502.12_172282476_172311828_2	chr2	+	2167	9	NNC	ENSMUSG00000027502.12	novel	2173	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGGGTTGGTTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	172282475	172311828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_172282664_172286576_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308193_172308252_172308348_172308445_172310515
ENSMUSG00000027502.12_172282632_172310697_1	chr2	+	828	8	FSM	ENSMUSG00000027502.12	ENST00000395881.7	870	8	42	0	42	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCGGGCCTTCACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	172282631	172310697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308348_172308445_172310515
ENSMUSG00000027506.16_8993487_9009740_1	chr3	-	2867	3	ISM	ENSMUSG00000027506.16	ENSMUST00000091354.12	2193	6	19366	-1171	19366	199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGCAAACGTCAGGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	9009740	8993486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_8996235_9000051_9000101_9009670
ENSMUSG00000027506.16_8993822_9018859_1	chr3	-	2829	5	ISM	ENSMUSG00000027506.16	ENSMUST00000091354.12	2193	6	10247	-836	10247	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCGGATTTCAGCCACTA	NA	NA	NA	NA	NA	NA	NA	NA	9018859	8993821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743
ENSMUSG00000027506.16_8994026_9069783_1	chr3	-	2944	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	0	3373	0	-340	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGTGTTTATGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	9069783	8994025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ENSMUSG00000027509.12_172841910_172850108_1	chr2	+	799	7	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	0	7424	0	-7424	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGAATCTCACTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	172841909	172850108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036
ENSMUSG00000027509.12_172842039_172851270_1	chr2	+	778	8	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	129	6262	129	-6262	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGCCACAGCTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	172842038	172851270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162
ENSMUSG00000027509.12_172842131_172853815_1	chr2	+	709	9	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	221	3717	221	-3717	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACAAACAGAACAAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	172842130	172853815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792
ENSMUSG00000027509.12_172844450_172853899_1	chr2	+	756	8	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	2540	3633	2540	-3633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGACTCGGGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	172844449	172853899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792
ENSMUSG00000027509.12_172845347_172854438_1	chr2	+	707	9	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	3437	3094	3437	-3094	internal_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTCCATGGTACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	172845346	172854438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419
ENSMUSG00000027509.12_172846983_172854506_1	chr2	+	687	8	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	5073	3026	5073	-3026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACCAAACTAAAGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	172846982	172854506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419
ENSMUSG00000027509.12_172848743_172857110_1	chr2	+	698	8	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	6833	422	6833	-422	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTTGCGTAATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	172848742	172857110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ENSMUSG00000027509.12_172849851_172857220_1	chr2	+	792	7	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	7941	312	7941	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCGGTGGCCCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	172849850	172857220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ENSMUSG00000027509.12_172853791_172857357_1	chr2	+	662	4	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	11881	175	11881	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACTGGAGTCAGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	172853790	172857357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172853900_172853972_172854049_172854419_172854615_172857075
ENSMUSG00000027509.12_172853828_172857422_1	chr2	+	690	4	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	11918	110	11918	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTGGTGAGCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	172853827	172857422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172853900_172853972_172854049_172854419_172854615_172857075
ENSMUSG00000027509.12_172853877_172857532_1	chr2	+	751	4	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	11967	0	11967	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATGTTCCAAGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	172853876	172857532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172853900_172853972_172854049_172854419_172854615_172857075
ENSMUSG00000027520.17_63334073_63342191_1	chr1	+	492	2	ISM	ENSMUSG00000027520.17	ENST00000650097.1	2372	5	14146	2022	4176	-2022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCGAGAGACCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	63334072	63342191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63334219_63341845
ENSMUSG00000027520.17_63334109_63342276_1	chr1	+	541	2	ISM	ENSMUSG00000027520.17	ENST00000650097.1	2372	5	14182	1937	4212	-1937	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACCTTGAAACATACTT	NA	NA	NA	NA	NA	NA	NA	NA	63334108	63342276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63334219_63341845
ENSMUSG00000027520.17_63334163_63342341_1	chr1	+	552	2	ISM	ENSMUSG00000027520.17	ENST00000650097.1	2372	5	14236	1872	4266	-1872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTAAAGACCCAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	63334162	63342341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63334219_63341845
ENSMUSG00000027520.17_63342677_63343277_1	chr1	+	522	2	ISM	ENSMUSG00000027520.17	ENST00000650097.1	2372	5	22750	936	12780	-936	internal_fragment	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAGCAGAATCCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	63342676	63343277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63342763_63342841
ENSMUSG00000027520.17_63343429_63344145_1	chr1	+	546	2	ISM	ENSMUSG00000027520.17	ENST00000650097.1	2372	5	23502	68	13532	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACGAAAACGTTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	63343428	63344145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63343931_63344101
ENSMUSG00000027520.17_63343518_63344213_1	chr1	+	525	2	ISM	ENSMUSG00000027520.17	ENST00000650097.1	2372	5	23591	0	13621	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCCCTCTTCATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	63343517	63344213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_63343931_63344101
ENSMUSG00000027523.21_174126146_174187217_1	chr2	+	718	9	ISM	ENSMUSG00000027523.21	ENST00000657090.1	1554	12	-3	1319	-3	-1078	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCAGTGCTTCAATGATG	NA	NA	NA	NA	NA	NA	NA	NA	174126145	174187217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174126302_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175
ENSMUSG00000027523.21_174169492_174188430_2	chr2	+	1493	11	FSM	ENSMUSG00000027523.21	ENST00000480975.5	1540	11	-49	96	0	-64	multi-exon	FALSE	canonical	NA	NA	NA	NA	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAAGCAGCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	174169491	174188430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_174169735_174176004_174176078_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_174169492_174188537_1	chr2	+	1645	12	FSM	ENSMUSG00000027523.21	ENST00000477931.5	1662	12	18	-1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	174169491	174188537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_174169735_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_174169561_174188430_1	chr2	+	1424	11	FSM	ENSMUSG00000027523.21	ENST00000480975.5	1540	11	20	96	0	-64	multi-exon	FALSE	canonical	NA	NA	NA	NA	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAAGCAGCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	174169560	174188430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_174169735_174176004_174176078_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_174169561_174188537_1	chr2	+	1576	12	FSM	ENSMUSG00000027523.21	ENST00000477931.5	1662	12	87	-1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	174169560	174188537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_174169735_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_174169561_174188537_2	chr2	+	1531	11	FSM	ENSMUSG00000027523.21	ENST00000480975.5	1540	11	20	-11	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	174169560	174188537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_174169735_174176004_174176078_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_174169816_174183500_1	chr2	+	2585	4	ISM	ENSMUSG00000027523.21	ENSMUST00000087871.11	3903	13	255	5037	255	3623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTCTAGCTCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	174169815	174183500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445
ENSMUSG00000027523.21_174170316_174187217_1	chr2	+	2474	9	ISM	ENSMUSG00000027523.21	ENSMUST00000087871.11	3903	13	755	1320	755	-1078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCAGTGCTTCAATGATG	NA	NA	NA	NA	NA	NA	NA	NA	174170315	174187217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175
ENSMUSG00000027523.21_174170350_174187333_1	chr2	+	2556	9	ISM	ENSMUSG00000027523.21	ENSMUST00000087871.11	3903	13	789	1204	789	-962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGAGCATCTGGAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	174170349	174187333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175
ENSMUSG00000027523.21_174170417_174187333_1	chr2	+	2489	9	ISM	ENSMUSG00000027523.21	ENSMUST00000087871.11	3903	13	856	1204	856	-962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGAGCATCTGGAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	174170416	174187333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175
ENSMUSG00000027523.21_174170632_174187832_1	chr2	+	2477	11	ISM	ENSMUSG00000027523.21	ENSMUST00000087871.11	3903	13	1071	705	1071	-463	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGGATGAGTTTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	174170631	174187832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782
ENSMUSG00000027523.21_174172080_174188430_1	chr2	+	1443	12	FSM	ENSMUSG00000027523.21	ENSMUST00000109087.8	1716	12	198	75	0	-64	multi-exon	FALSE	canonical	NA	NA	NA	NA	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAAGCAGCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	174172079	174188430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_174172080_174188537_1	chr2	+	1550	12	FSM	ENSMUSG00000027523.21	ENSMUST00000109087.8	1716	12	198	-32	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	174172079	174188537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_174176005_174179877_1	chr2	+	535	2	NNC	ENSMUSG00000027523.21	novel	537	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTATCTTGCGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	174176004	174179877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_174176078_174179415
ENSMUSG00000027523.21_174176005_174179877_2	chr2	+	537	2	FSM	ENSMUSG00000027523.21	ENST00000484504.5	537	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTATCTTGCGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	174176004	174179877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_174176078_174179413
ENSMUSG00000027523.21_174176005_174188537_1	chr2	+	1360	10	ISM	ENSMUSG00000027523.21	ENSMUST00000109085.8	1789	11	4206	0	0	0	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	174176004	174188537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174176078_174183442_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_174178679_174188108_1	chr2	+	922	10	ISM	ENSMUSG00000027523.21	ENST00000682803.1	1671	12	6563	425	2674	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCGCCGTGTCTTCAACG	NA	NA	NA	NA	NA	NA	NA	NA	174178678	174188108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_174178746_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_174183603_174188295_1	chr2	+	987	8	NIC	ENSMUSG00000027523.21	novel	3519	12	NA	NA	-2507	0	combination_of_known_splicesites	FALSE	non_canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCCCCAGTGATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	174183602	174188295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_174183721_174184990_174185091_174186867_174186920_174187017_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_174184993_174188430_1	chr2	+	1002	7	NIC	ENSMUSG00000027523.21	novel	2514	11	NA	NA	-1117	-64	combination_of_known_splicesites	FALSE	non_canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAAGCAGCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	174184992	174188430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_174185091_174186867_174186920_174187017_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027524.10_174602592_174623952_1	chr2	+	988	4	FSM	ENSMUSG00000027524.10	ENST00000371025.7	1079	4	3	88	0	-88	multi-exon	TRUE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTCCCTAATGGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	174602591	174623952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_174602812_174603305_174603619_174620380_174620558_174623674
ENSMUSG00000027525.19_177897957_177925853_1	chr2	+	748	5	ISM	ENSMUSG00000027525.19	ENST00000361300.4	1901	11	52	52009	52	-52009	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTGTATCAGGACGAGG	NA	NA	NA	NA	NA	NA	NA	NA	177897956	177925853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_177898068_177901970_177902049_177911109_177911293_177924802_177924978_177925652
ENSMUSG00000027525.19_177898048_177944528_1	chr2	+	755	6	ISM	ENSMUSG00000027525.19	ENST00000361300.4	1901	11	143	33334	143	-33334	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGCCGAGCAAGCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	177898047	177944528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_177898068_177901970_177902049_177911109_177911293_177924802_177924978_177925652_177925901_177944477
ENSMUSG00000027525.19_177901968_177944631_1	chr2	+	841	5	ISM	ENSMUSG00000027525.19	ENST00000361300.4	1901	11	4063	33231	4063	-33231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAGCCGGTGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	177901967	177944631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_177902049_177911109_177911293_177924802_177924978_177925652_177925901_177944477
ENSMUSG00000027525.19_177911261_177974645_1	chr2	+	758	7	ISM	ENSMUSG00000027525.19	ENST00000361300.4	1901	11	13356	3217	13356	-3217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACAGAAAAATTCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	177911260	177974645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_177911293_177924802_177924978_177925652_177925901_177944477_177944632_177969930_177969987_177973372_177973435_177974614
ENSMUSG00000027525.19_177924900_177975891_1	chr2	+	787	7	ISM	ENSMUSG00000027525.19	ENST00000361300.4	1901	11	26995	1971	26995	-1971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACACGCATCCAGCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	177924899	177975891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_177924978_177925652_177925901_177944477_177944632_177969930_177969987_177973372_177973435_177974614_177974756_177975843
ENSMUSG00000027525.19_177925651_177977335_1	chr2	+	777	7	ISM	ENSMUSG00000027525.19	ENST00000361300.4	1901	11	27746	527	27746	-527	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTTAATTTTTGATAC	NA	NA	NA	NA	NA	NA	NA	NA	177925650	177977335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_177925901_177944477_177944632_177969930_177969987_177973372_177973435_177974614_177974756_177975843_177975921_177977298
ENSMUSG00000027525.19_177925718_177977383_1	chr2	+	758	7	ISM	ENSMUSG00000027525.19	ENST00000361300.4	1901	11	27813	479	27813	-479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAAGTCTAACTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	177925717	177977383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_177925901_177944477_177944632_177969930_177969987_177973372_177973435_177974614_177974756_177975843_177975921_177977298
ENSMUSG00000027525.19_177925784_177977446_1	chr2	+	755	7	ISM	ENSMUSG00000027525.19	ENST00000361300.4	1901	11	27879	416	27879	-416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTACAAGAGGAGCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	177925783	177977446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_177925901_177944477_177944632_177969930_177969987_177973372_177973435_177974614_177974756_177975843_177975921_177977298
ENSMUSG00000027525.19_177944515_177977607_1	chr2	+	762	6	ISM	ENSMUSG00000027525.19	ENST00000361300.4	1901	11	46610	255	-25070	-255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCATGCATGTGCAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	177944514	177977607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_177944632_177969930_177969987_177973372_177973435_177974614_177974756_177975843_177975921_177977298
ENSMUSG00000027525.19_177944573_177977651_1	chr2	+	748	6	ISM	ENSMUSG00000027525.19	ENST00000361300.4	1901	11	46668	211	-25012	-211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGACCTGTGACCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	177944572	177977651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_177944632_177969930_177969987_177973372_177973435_177974614_177974756_177975843_177975921_177977298
ENSMUSG00000027531.17_10387964_10393538_1	chr3	-	394	4	ISM	ENSMUSG00000027531.17	ENSMUST00000191670.6	1100	8	2894	8039	2894	-8039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTTGTCTTCCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	10393538	10387963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_10388073_10389111_10389158_10391166_10391272_10393404
ENSMUSG00000027534.17_10483773_10485330_1	chr3	-	585	2	ISM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	19817	567	19817	224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTGAACACCCAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	10485330	10483772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_10484284_10485256
ENSMUSG00000027534.17_10484147_10499532_1	chr3	-	579	5	ISM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	5615	941	5615	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAACTGCCATCCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	10499532	10484146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417
ENSMUSG00000027534.17_10485308_10502927_1	chr3	-	569	6	ISM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	2220	2102	2220	-1311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCCCTCTGTACTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	10502927	10485307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870
ENSMUSG00000027534.17_10499505_10503327_1	chr3	-	606	3	ISM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	1820	16299	1820	-15508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATGCGGAATTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	10503327	10499504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_10499567_10500505_10500593_10502870
ENSMUSG00000027540.14_167774315_167818847_1	chr2	+	1687	9	FSM	ENSMUSG00000027540.14	ENSMUST00000029053.8	4213	9	68	2458	68	-2458	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAACACATTGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	167774314	167818847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_167774477_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
ENSMUSG00000027540.14_167774315_167818880_1	chr2	+	1720	9	FSM	ENSMUSG00000027540.14	ENSMUST00000029053.8	4213	9	68	2425	68	-2425	multi-exon	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGGTTTTTGTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	167774314	167818880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_167774477_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
ENSMUSG00000027540.14_167774421_167818942_1	chr2	+	1676	9	FSM	ENSMUSG00000027540.14	ENSMUST00000029053.8	4213	9	174	2363	174	-2363	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCTTTGGCATGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	167774420	167818942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_167774477_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
ENSMUSG00000027540.14_167805606_167819088_1	chr2	+	1708	8	ISM	ENSMUSG00000027540.14	ENST00000371621.5	1280	9	60	2217	60	-2217	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGAGGGCAGCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	167805605	167819088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
ENSMUSG00000027540.14_167813612_167821305_1	chr2	+	988	6	ISM	ENSMUSG00000027540.14	ENST00000371621.5	1280	9	8066	0	8066	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGTGATGTGCTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	167813611	167821305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344_167818480_167821184
ENSMUSG00000027540.14_167816014_167819447_1	chr2	+	1662	4	ISM	ENSMUSG00000027540.14	ENST00000371621.5	1280	9	10468	1858	10468	-1858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCTCTCGAAGGCATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	167816013	167819447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_167816190_167816648_167816811_167817228_167817450_167818344
ENSMUSG00000027540.14_167816061_167819514_1	chr2	+	1682	4	ISM	ENSMUSG00000027540.14	ENST00000371621.5	1280	9	10515	1791	10515	-1791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTCTGGACTCAAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	167816060	167819514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_167816190_167816648_167816811_167817228_167817450_167818344
ENSMUSG00000027540.14_167816702_167819667_1	chr2	+	1653	3	ISM	ENSMUSG00000027540.14	ENST00000371621.5	1280	9	11156	1638	11156	-1638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCTGCAGGCCACAATGG	NA	NA	NA	NA	NA	NA	NA	NA	167816701	167819667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_167816811_167817228_167817450_167818344
ENSMUSG00000027540.14_167816751_167819722_1	chr2	+	1659	3	ISM	ENSMUSG00000027540.14	ENST00000371621.5	1280	9	11205	1583	11205	-1583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCACATGGAGCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	167816750	167819722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_167816811_167817228_167817450_167818344
ENSMUSG00000027540.14_167817365_167819928_1	chr2	+	1669	2	ISM	ENSMUSG00000027540.14	ENST00000371621.5	1280	9	11819	1377	11819	-1377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCTGAAACTGACCGTG	NA	NA	NA	NA	NA	NA	NA	NA	167817364	167819928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_167817450_167818344
ENSMUSG00000027544.17_168322118_168346454_1	chr2	-	228	3	ISM	ENSMUSG00000027544.17	ENST00000610033.5	2500	11	85811	0	85657	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAGAAACAAACATAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	168346454	168322117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_168322170_168328605_168328692_168346364
ENSMUSG00000027544.17_168346996_168365193_1	chr2	-	278	4	ISM	ENSMUSG00000027544.17	ENST00000610033.5	2500	11	67072	24878	66918	13127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGGAGGCCTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	168365193	168346995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_168347055_168348787_168348915_168349234_168349291_168365157
ENSMUSG00000027544.17_168378279_168412563_1	chr2	-	265	3	ISM	ENSMUSG00000027544.17	ENSMUST00000029057.13	2310	7	19548	17261	19548	-17261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGACAGCAGATGAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	168412563	168378278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_168378326_168409058_168409231_168412517
ENSMUSG00000027544.17_168409091_168412624_1	chr2	-	247	2	ISM	ENSMUSG00000027544.17	ENSMUST00000029057.13	2310	7	19487	48073	19487	-48073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCCCAACAGGAGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	168412624	168409090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_168409231_168412517
ENSMUSG00000027544.17_168412918_168432114_1	chr2	-	249	2	ISM	ENSMUSG00000027544.17	ENST00000610033.5	2500	11	151	90800	-3	-51900	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTGCGCAGAGGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	168432114	168412917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_168413034_168431981
ENSMUSG00000027544.17_168412979_168432180_1	chr2	-	254	2	ISM	ENSMUSG00000027544.17	ENST00000610033.5	2500	11	85	90861	0	-51961	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACACTCGCCCGTGCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	168432180	168412978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_168413034_168431981
ENSMUSG00000027547.18_168591960_168597863_1	chr2	-	2208	3	FSM	ENSMUSG00000027547.18	ENST00000423288.1	2990	3	782	0	762	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCAGCTAAGGAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	168597863	168591959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_168592381_168594373_168594651_168596353
ENSMUSG00000027547.18_168592106_168598223_1	chr2	-	1112	3	FSM	ENSMUSG00000027547.18	ENST00000429385.1	1514	3	402	0	402	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTGAGCAATGGCACGA	NA	NA	NA	NA	NA	NA	NA	NA	168598223	168592105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_168592381_168594373_168594661_168597673
ENSMUSG00000027547.18_168592106_168598223_2	chr2	-	1110	3	NNC	ENSMUSG00000027547.18	novel	1514	3	NA	NA	402	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTGAGCAATGGCACGA	NA	NA	NA	NA	NA	NA	NA	NA	168598223	168592105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_168592381_168594373_168594661_168597675
ENSMUSG00000027547.18_168592265_168598223_2	chr2	-	2263	3	FSM	ENSMUSG00000027547.18	ENST00000423288.1	2990	3	422	305	402	-159	multi-exon	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGGAGCTCCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	168598223	168592264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_168592381_168594373_168594651_168596353
ENSMUSG00000027547.18_168594372_168598484_1	chr2	-	1100	2	ISM	ENSMUSG00000027547.18	ENST00000429385.1	1514	3	141	2266	141	-2266	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTCCGACGGGCGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	168598484	168594371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_168594661_168597673
ENSMUSG00000027547.18_168594476_168598484_1	chr2	-	2306	2	ISM	ENSMUSG00000027547.18	ENST00000423288.1	2990	3	161	2516	141	-2370	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCAGTGCCCTGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	168598484	168594475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_168594651_168596353
ENSMUSG00000027547.18_168594476_168598582_1	chr2	-	1094	2	ISM	ENSMUSG00000027547.18	ENST00000429385.1	1514	3	43	2370	43	-2370	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCAGTGCCCTGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	168598582	168594475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_168594661_168597673
ENSMUSG00000027551.16_168768173_168777235_1	chr2	-	786	2	ISM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	19957	892	19957	-892	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCAGTCCAGCCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	168777235	168768172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_168768854_168777130
ENSMUSG00000027551.16_168768496_168782760_1	chr2	-	777	4	ISM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	14432	1215	14432	-1215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGCAGCTTCGATACCA	NA	NA	NA	NA	NA	NA	NA	NA	168782760	168768495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656
ENSMUSG00000027551.16_168768685_168793592_1	chr2	-	774	5	ISM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	3600	1404	3600	-1404	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAATAACTTCAAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	168793592	168768684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464
ENSMUSG00000027551.16_168768745_168793655_1	chr2	-	777	5	ISM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	3537	1464	3537	-1464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAATGTCCGCTGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	168793655	168768744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464
ENSMUSG00000027551.16_168776733_168793563_1	chr2	-	703	5	ISM	ENSMUSG00000027551.16	ENSMUST00000109161.3	1009	6	3646	0	3629	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTACTGTTGTTACCATT	NA	NA	NA	NA	NA	NA	NA	NA	168793563	168776732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_168776860_168777130_168777383_168781890_168781954_168782656_168782819_168793464
ENSMUSG00000027551.16_168776846_168793604_1	chr2	-	631	5	ISM	ENSMUSG00000027551.16	ENSMUST00000109161.3	1009	6	3605	113	3588	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTGGCAGTACAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	168793604	168776845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_168776860_168777130_168777383_168781890_168781954_168782656_168782819_168793464
ENSMUSG00000027551.16_168777131_168797186_1	chr2	-	859	5	ISM	ENSMUSG00000027551.16	ENSMUST00000109161.3	1009	6	23	398	6	-398	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCAGCGGTGCGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	168797186	168777130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ENSMUSG00000027552.15_14643701_14671077_1	chr3	+	1490	8	FSM	ENSMUSG00000027552.15	ENSMUST00000165922.3	1751	8	-30	291	0	-291	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCAGAAGATCACTTATT	NA	NA	NA	NA	NA	NA	NA	NA	14643700	14671077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_14644084_14652369_14652480_14653199_14653362_14666059_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
ENSMUSG00000027552.15_14643731_14671105_1	chr3	+	1488	8	FSM	ENSMUSG00000027552.15	ENSMUST00000165922.3	1751	8	0	263	0	-263	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGCCGCAAAATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	14643730	14671105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_14644084_14652369_14652480_14653199_14653362_14666059_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
ENSMUSG00000027552.15_14643891_14671219_1	chr3	+	1437	8	NNC	ENSMUSG00000027552.15	novel	1751	8	NA	NA	160	-149	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTAAGCCTATCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	14643890	14671219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_14644084_14652369_14652480_14653199_14653357_14666059_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
ENSMUSG00000027552.15_14643920_14671232_1	chr3	+	1426	8	FSM	ENSMUSG00000027552.15	ENSMUST00000165922.3	1751	8	189	136	189	-136	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTGTTGACTTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	14643919	14671232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_14644084_14652369_14652480_14653199_14653362_14666059_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
ENSMUSG00000027552.15_14643971_14671369_1	chr3	+	1500	7	NNC	ENSMUSG00000027552.15	novel	1779	8	NA	NA	240	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATCTTTGGGGGAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	14643970	14671369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_14644084_14652369_14652480_14653199_14653378_14667688_14667773_14668697_14668966_14670184_14670230_14670667
ENSMUSG00000027552.15_14644008_14671369_1	chr3	+	1470	8	NNC	ENSMUSG00000027552.15	novel	1751	8	NA	NA	277	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATCTTTGGGGGAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	14644007	14671369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_14644084_14652369_14652480_14653199_14653357_14666059_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
ENSMUSG00000027552.15_14652369_14671369_1	chr3	+	1400	7	ISM	ENSMUSG00000027552.15	ENSMUST00000165922.3	1751	8	8638	-1	8638	0	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATCTTTGGGGGAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	14652368	14671369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_14652480_14653199_14653362_14666059_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
ENSMUSG00000027555.9_14706787_14727824_1	chr3	+	2061	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	0	238	0	-238	multi-exon	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGAGTAAATTGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	14706786	14727824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
ENSMUSG00000027555.9_14706787_14727836_1	chr3	+	2073	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	0	226	0	-226	multi-exon	FALSE	canonical	NA	NA	NA	NA	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACTTGATAATGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	14706786	14727836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
ENSMUSG00000027555.9_14706787_14727909_1	chr3	+	2146	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	0	153	0	-153	multi-exon	FALSE	canonical	NA	NA	NA	NA	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTGCCGAGTCCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	14706786	14727909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
ENSMUSG00000027555.9_14710196_14728063_1	chr3	+	2082	6	ISM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	3409	-1	3409	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCTTTTGGAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	14710195	14728063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
ENSMUSG00000027556.16_14831596_14832560_1	chr3	-	214	2	ISM	ENSMUSG00000027556.16	ENST00000522389.5	370	3	3404	0	3404	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCCAGCAAGGAATGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	14832560	14831595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_14831713_14832463
ENSMUSG00000027556.16_14831653_14832621_1	chr3	-	218	2	ISM	ENSMUSG00000027556.16	ENST00000522389.5	370	3	3343	57	3343	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACCACCGTCCACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	14832621	14831652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_14831713_14832463
ENSMUSG00000027556.16_14832464_14835918_1	chr3	-	207	2	ISM	ENSMUSG00000027556.16	ENST00000522389.5	370	3	46	868	46	-868	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCAATCGAATGGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	14835918	14832463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_14832620_14835867
ENSMUSG00000027559.6_14928572_14936777_1	chr3	+	899	7	FSM	ENSMUSG00000027559.6	ENSMUST00000029076.6	1679	7	-26	806	-26	-806	multi-exon	FALSE	canonical	NA	NA	NA	NA	1786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCCTGGTGCTCCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	14928571	14936777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_14928666_14929309_14929508_14931862_14931982_14933408_14933502_14934294_14934358_14935101_14935258_14936601
ENSMUSG00000027559.6_14929309_14936904_1	chr3	+	933	6	ISM	ENSMUSG00000027559.6	ENSMUST00000029076.6	1679	7	711	679	711	-679	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATAACCACCTGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	14929308	14936904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_14929508_14931862_14931982_14933408_14933502_14934294_14934358_14935101_14935258_14936601
ENSMUSG00000027559.6_14931863_14937129_1	chr3	+	959	5	ISM	ENSMUSG00000027559.6	ENSMUST00000029076.6	1679	7	3265	454	3265	-454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTTAAGTGAAAACACACG	NA	NA	NA	NA	NA	NA	NA	NA	14931862	14937129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_14931982_14933408_14933502_14934294_14934358_14935101_14935258_14936601
ENSMUSG00000027559.6_14931863_14937129_2	chr3	+	953	5	NNC	ENSMUSG00000027559.6	novel	1679	7	NA	NA	3265	-454	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTTAAGTGAAAACACACG	NA	NA	NA	NA	NA	NA	NA	NA	14931862	14937129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_14931982_14933408_14933502_14934294_14934358_14935107_14935258_14936601
ENSMUSG00000027562.13_14951488_14965830_1	chr3	+	1782	7	NNC	ENSMUSG00000027562.13	novel	1788	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCTGATTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	14951487	14965830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962979_14963130_14965030
ENSMUSG00000027566.16_179678167_179681273_1	chr2	-	754	6	NNC	ENSMUSG00000027566.16	novel	914	7	NA	NA	2930	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	179681273	179678166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_179678367_179678730_179678785_179679171_179679296_179679857_179679981_179680517_179680643_179681145
ENSMUSG00000027566.16_179678167_179684178_1	chr2	-	859	7	NNC	ENSMUSG00000027566.16	novel	914	7	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3797	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	179684178	179678166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_179678367_179678730_179678794_179679182_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
ENSMUSG00000027566.16_179678167_179684178_2	chr2	-	863	7	NNC	ENSMUSG00000027566.16	novel	914	7	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	179684178	179678166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_179678367_179678730_179678785_179679169_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
ENSMUSG00000027566.16_179678167_179684203_1	chr2	-	884	7	NNC	ENSMUSG00000027566.16	novel	1157	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	179684203	179678166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_179678367_179678730_179678794_179679182_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
ENSMUSG00000027566.16_179678167_179684203_2	chr2	-	888	7	NNC	ENSMUSG00000027566.16	novel	1157	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	179684203	179678166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_179678367_179678730_179678785_179679169_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
ENSMUSG00000027569.16_180224551_180228097_1	chr2	+	1475	5	NNC	ENSMUSG00000027569.16	novel	1510	5	NA	NA	46	17	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCTTGGAAGTTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	180224550	180228097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_180224749_180225193_180225316_180226198_180226281_180226595_180226665_180227093
ENSMUSG00000027573.12_180351910_180360146_1	chr2	+	1275	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	0	380	0	-377	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCTGCTATGTGCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	180351909	180360146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
ENSMUSG00000027573.12_180352074_180360242_1	chr2	+	1207	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	164	284	164	-281	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTCCTTCATAGGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	180352073	180360242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
ENSMUSG00000027573.12_180352109_180360308_1	chr2	+	1238	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	199	218	199	-215	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGTTTGGATCGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	180352108	180360308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
ENSMUSG00000027573.12_180356480_180360528_1	chr2	+	1296	3	ISM	ENSMUSG00000027573.12	ENSMUST00000078687.6	2063	4	2141	-5	2141	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTTCTAAAAAGTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	180356479	180360528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180356680_180358651_180358850_180359630
ENSMUSG00000027575.20_180612833_180621020_1	chr2	+	819	10	ISM	ENSMUSG00000027575.20	ENSMUST00000184394.2	1209	12	-15	2143	0	-2143	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGGGTGGCACCAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	180612832	180621020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620204_180620235_180620963
ENSMUSG00000027575.20_180613367_180621513_1	chr2	+	804	10	ISM	ENSMUSG00000027575.20	ENST00000353546.7	1363	13	534	1729	519	-1650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGCCTACCCTGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	180613366	180621513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620204_180620235_180620963_180621021_180621453
ENSMUSG00000027575.20_180613808_180622867_1	chr2	+	772	11	ISM	ENSMUSG00000027575.20	ENST00000547204.5	1230	12	975	352	960	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACTCTCAGAACAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	180613807	180622867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620204_180620235_180620963_180621021_180621453_180621514_180622196_180622268_180622829
ENSMUSG00000027575.20_180613878_180622895_1	chr2	+	726	10	NNC	ENSMUSG00000027575.20	novel	1230	12	NA	NA	1030	-268	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTCTGGGAGACCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	180613877	180622895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620937_180621021_180621453_180621514_180622196_180622268_180622829
ENSMUSG00000027575.20_180613880_180622904_1	chr2	+	737	11	ISM	ENSMUSG00000027575.20	ENST00000547204.5	1230	12	1047	315	1032	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACCTTTGGGAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	180613879	180622904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620204_180620235_180620963_180621021_180621453_180621514_180622196_180622268_180622829
ENSMUSG00000027575.20_180613933_180622956_1	chr2	+	736	11	ISM	ENSMUSG00000027575.20	ENST00000547204.5	1230	12	1100	263	1085	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGACCTGTGCAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	180613932	180622956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620204_180620235_180620963_180621021_180621453_180621514_180622196_180622268_180622829
ENSMUSG00000027575.20_180615279_180623163_1	chr2	+	795	8	NNC	ENSMUSG00000027575.20	novel	1230	12	NA	NA	2431	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTAGCACCCTAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	180615278	180623163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620939_180621021_180621453_180621514_180622196_180622268_180622829
ENSMUSG00000027581.13_180948557_180949197_1	chr2	-	246	2	FSM	ENSMUSG00000027581.13	ENST00000604037.1	246	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTATTGGACCCAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	180949197	180948556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_180948614_180949008
ENSMUSG00000027582.17_181007534_181021664_1	chr2	+	990	5	ISM	ENSMUSG00000027582.17	ENST00000357119.8	1778	6	69	914	69	-911	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAAAGCGAGGCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	181007533	181021664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181008046_181020175_181020310_181020543_181020670_181021362_181021483_181021566
ENSMUSG00000027582.17_181007649_181021768_1	chr2	+	979	5	ISM	ENSMUSG00000027582.17	ENST00000357119.8	1778	6	184	810	184	-807	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAAAAACTGCAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	181007648	181021768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181008046_181020175_181020310_181020543_181020670_181021362_181021483_181021566
ENSMUSG00000027582.17_181007698_181021836_1	chr2	+	998	5	ISM	ENSMUSG00000027582.17	ENST00000357119.8	1778	6	233	742	233	-739	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGACATGTATCACGCC	NA	NA	NA	NA	NA	NA	NA	NA	181007697	181021836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181008046_181020175_181020310_181020543_181020670_181021362_181021483_181021566
ENSMUSG00000027582.17_181007894_181022200_1	chr2	+	971	6	FSM	ENSMUSG00000027582.17	ENST00000357119.8	1778	6	429	378	429	-375	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGGGAGCCCAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	181007893	181022200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_181008046_181020175_181020310_181020543_181020670_181021362_181021483_181021566_181021973_181022167
ENSMUSG00000027582.17_181007958_181022243_1	chr2	+	950	6	FSM	ENSMUSG00000027582.17	ENST00000357119.8	1778	6	493	335	493	-332	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCTGACCTACAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	181007957	181022243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_181008046_181020175_181020310_181020543_181020670_181021362_181021483_181021566_181021973_181022167
ENSMUSG00000027582.17_181008021_181022285_1	chr2	+	929	6	FSM	ENSMUSG00000027582.17	ENST00000357119.8	1778	6	556	293	556	-290	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGATGACAGAGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	181008020	181022285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_181008046_181020175_181020310_181020543_181020670_181021362_181021483_181021566_181021973_181022167
ENSMUSG00000027582.17_181020187_181022387_1	chr2	+	995	5	ISM	ENSMUSG00000027582.17	ENST00000357119.8	1778	6	12722	191	12722	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAACAGCACCTGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	181020186	181022387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181020310_181020543_181020670_181021362_181021483_181021566_181021973_181022167
ENSMUSG00000027582.17_181020187_181022430_1	chr2	+	1038	5	ISM	ENSMUSG00000027582.17	ENST00000357119.8	1778	6	12722	148	12722	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTAATTAGCCTTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	181020186	181022430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181020310_181020543_181020670_181021362_181021483_181021566_181021973_181022167
ENSMUSG00000027582.17_181020543_181022531_1	chr2	+	1017	4	ISM	ENSMUSG00000027582.17	ENST00000357119.8	1778	6	13078	47	13078	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTCTTGGGGTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	181020542	181022531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181020670_181021362_181021483_181021566_181021973_181022167
ENSMUSG00000027589.15_181484247_181498826_1	chr2	+	1329	3	NNC	ENSMUSG00000027589.15	novel	1403	4	NA	NA	62	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1123	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTCAGTGAAATATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	181484246	181498826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_181484499_181486190_181486292_181497850
ENSMUSG00000027589.15_181484247_181498826_2	chr2	+	1331	3	NIC	ENSMUSG00000027589.15	novel	1403	4	NA	NA	62	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTCAGTGAAATATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	181484246	181498826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_181484499_181486188_181486292_181497850
ENSMUSG00000027589.15_181484247_181498826_3	chr2	+	1346	3	NNC	ENSMUSG00000027589.15	novel	1403	4	NA	NA	62	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTCAGTGAAATATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	181484246	181498826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_181484499_181486188_181486292_181497835
ENSMUSG00000027589.15_181484247_181498826_4	chr2	+	1338	3	NNC	ENSMUSG00000027589.15	novel	1403	4	NA	NA	62	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTCAGTGAAATATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	181484246	181498826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_181484499_181486188_181486292_181497843
ENSMUSG00000027593.16_154633272_154709166_1	chr2	+	1454	8	FSM	ENSMUSG00000027593.16	ENSMUST00000109701.10	1709	8	256	-1	195	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGAGGTGGAATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	154633271	154709166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_154633469_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ENSMUSG00000027597.16_154901679_154904100_1	chr2	-	854	2	ISM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	12317	449	12317	-449	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGATAAAATACAGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	154904100	154901678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154902501_154904068
ENSMUSG00000027597.16_154901732_154904164_1	chr2	-	865	2	ISM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	12253	502	12253	-502	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAATTTGTTTTATAATG	NA	NA	NA	NA	NA	NA	NA	NA	154904164	154901731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154902501_154904068
ENSMUSG00000027597.16_154901859_154905712_1	chr2	-	850	3	ISM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	10705	629	10705	-629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGTTAGGATAGATTAAC	NA	NA	NA	NA	NA	NA	NA	NA	154905712	154901858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154902501_154904068_154904264_154905699
ENSMUSG00000027597.16_154901919_154905778_1	chr2	-	856	3	ISM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	10639	689	10639	-689	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCAGTCTCTTAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	154905778	154901918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154902501_154904068_154904264_154905699
ENSMUSG00000027597.16_154902132_154906152_1	chr2	-	849	5	ISM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	10265	902	10265	-902	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCAGAAGTCTTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	154906152	154902131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073
ENSMUSG00000027597.16_154902371_154907470_1	chr2	-	866	7	ISM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	8947	1141	8947	-1141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGCTGGGGCTGTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	154907470	154902370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456
ENSMUSG00000027597.16_154902431_154907514_1	chr2	-	850	7	ISM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	8903	1201	8903	-1201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCAGTACCTGGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	154907514	154902430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456
ENSMUSG00000027597.16_154902470_154907601_1	chr2	-	898	7	ISM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	8816	1240	8816	-1240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCTGAATGTGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	154907601	154902469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456
ENSMUSG00000027597.16_154904206_154910786_1	chr2	-	850	8	ISM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	5631	2976	5631	-2976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCAACCTGGGTTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	154910786	154904205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747
ENSMUSG00000027597.16_154905746_154910892_1	chr2	-	852	7	ISM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	5525	4516	5525	-4516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTCAATGAGAACGCGG	NA	NA	NA	NA	NA	NA	NA	NA	154910892	154905745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747
ENSMUSG00000027597.16_154905954_154916367_1	chr2	-	864	7	ISM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	50	4724	50	-4724	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTGTCACCACCACAG	NA	NA	NA	NA	NA	NA	NA	NA	154916367	154905953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_154905997_154906073_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747_154910939_154916284
ENSMUSG00000027598.17_154975429_155031426_1	chr2	+	1249	11	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	-4	35274	0	-35274	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCACATCAGTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	154975428	155031426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_154975506_154980115_154980193_155005312_155005404_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356
ENSMUSG00000027598.17_154980115_155034130_1	chr2	+	1258	11	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	4682	32570	4636	-32570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGCTTTAGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	154980114	155034130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_154980193_155005312_155005404_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045
ENSMUSG00000027598.17_155014376_155044199_1	chr2	+	1292	11	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	38943	22501	38897	-22501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTATTGGCTCTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	155014375	155044199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126
ENSMUSG00000027598.17_155015951_155048262_1	chr2	+	1191	12	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	40518	18438	40472	-18438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGGAGAAGAAGGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	155015950	155048262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212
ENSMUSG00000027598.17_155022472_155051138_1	chr2	+	1305	11	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	47039	15562	46993	-15562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTACAAGTACAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	155022471	155051138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978
ENSMUSG00000027598.17_155022603_155051953_1	chr2	+	1221	12	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	47170	14747	47124	-14747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAAACGTATCCTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	155022602	155051953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906
ENSMUSG00000027598.17_155024155_155052377_1	chr2	+	1220	12	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	48722	14323	48676	-14323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTTTGGAAATGTACT	NA	NA	NA	NA	NA	NA	NA	NA	155024154	155052377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359
ENSMUSG00000027598.17_155024215_155034071_1	chr2	+	330	4	ISM	ENSMUSG00000027598.17	ENST00000665484.1	4015	25	48760	34552	48736	-32629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTTTGTCAACCACAA	NA	NA	NA	NA	NA	NA	NA	NA	155024214	155034071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155024274_155027349_155027525_155031356_155031427_155034045
ENSMUSG00000027598.17_155024226_155052426_1	chr2	+	1198	12	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	48793	14274	48747	-14274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAGAGTCATGATTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	155024225	155052426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359
ENSMUSG00000027598.17_155025654_155054325_1	chr2	+	1294	12	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	50221	12375	50175	-12375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTCTTCCTCAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	155025653	155054325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256
ENSMUSG00000027598.17_155027394_155054937_1	chr2	+	1225	12	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	51961	11763	51915	-11763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGATTGATTTGAATGACT	NA	NA	NA	NA	NA	NA	NA	NA	155027393	155054937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917
ENSMUSG00000027598.17_155027460_155054976_1	chr2	+	1198	12	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	52027	11724	51981	-11724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGCCACTACACCAGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	155027459	155054976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917
ENSMUSG00000027598.17_155027509_155055028_1	chr2	+	1201	12	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	52076	11672	52030	-11672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAATTTATTTCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	155027508	155055028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917
ENSMUSG00000027598.17_155031356_155060007_1	chr2	+	1277	12	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	55923	6693	55877	-6693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACGTATAAAGGGAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	155031355	155060007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910
ENSMUSG00000027598.17_155034045_155062200_1	chr2	+	1280	12	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	58612	4500	58566	-4500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGCAAAATCAGAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	155034044	155062200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127
ENSMUSG00000027598.17_155041304_155066353_1	chr2	+	1212	12	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	65871	347	65825	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAAGAAACTGAAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	155041303	155066353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ENSMUSG00000027598.17_155041370_155066405_1	chr2	+	1198	12	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	65937	295	65891	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGGCCAGGGACTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	155041369	155066405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ENSMUSG00000027598.17_155048275_155066662_1	chr2	+	1234	9	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	72842	38	72796	-38	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAACAGTTTGCTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	155048274	155066662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ENSMUSG00000027598.17_155066703_155067929_1	chr2	+	357	2	ISM	ENSMUSG00000027598.17	ENST00000665484.1	4015	25	91248	694	91224	-694	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTCTTTCCAAAGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	155066702	155067929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155066955_155067824
ENSMUSG00000027598.17_155066768_155067974_1	chr2	+	337	2	ISM	ENSMUSG00000027598.17	ENST00000665484.1	4015	25	91313	649	91289	-649	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTAAAAAAAAATGTATATG	NA	NA	NA	NA	NA	NA	NA	NA	155066767	155067974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155066955_155067824
ENSMUSG00000027598.17_155066884_155068088_1	chr2	+	335	2	ISM	ENSMUSG00000027598.17	ENST00000665484.1	4015	25	91429	535	91405	-535	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACAAAGACTTCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	155066883	155068088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155066955_155067824
ENSMUSG00000027599.10_19186764_19189059_1	chr3	-	1677	2	ISM	ENSMUSG00000027599.10	ENST00000458464.3	2584	5	22798	454	22798	-454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTATGGCCCATGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	19189059	19186763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_19188388_19189006
ENSMUSG00000027599.10_19186897_19189287_1	chr3	-	1683	3	ISM	ENSMUSG00000027599.10	ENST00000458464.3	2584	5	22570	587	22570	-587	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGAGCTGCTGTTTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	19189287	19186896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_19188388_19189006_19189082_19189170
ENSMUSG00000027599.10_19187078_19198667_1	chr3	-	1676	4	ISM	ENSMUSG00000027599.10	ENSMUST00000029125.10	3673	7	18562	1512	13190	-768	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAGATATATACAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	19198667	19187077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493
ENSMUSG00000027599.10_19187242_19211711_1	chr3	-	1696	6	ISM	ENSMUSG00000027599.10	ENSMUST00000029125.10	3673	7	5518	1676	146	-932	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCAGAGATGCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	19211711	19187241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635
ENSMUSG00000027599.10_19187437_19217110_1	chr3	-	1683	7	FSM	ENSMUSG00000027599.10	ENSMUST00000029125.10	3673	7	119	1871	119	-1127	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGCTTTTAAGAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	19217110	19187436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
ENSMUSG00000027599.10_19187497_19217229_1	chr3	-	1742	7	FSM	ENSMUSG00000027599.10	ENSMUST00000029125.10	3673	7	0	1931	0	-1187	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTGGAAGGATTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	19217229	19187496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
ENSMUSG00000027601.14_19254231_19271424_1	chr3	+	630	5	ISM	ENSMUSG00000027601.14	ENSMUST00000119865.8	1367	8	12720	2110	11957	-2110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCAAAGTACGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	19254230	19271424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343
ENSMUSG00000027601.14_19260615_19271587_1	chr3	+	693	4	ISM	ENSMUSG00000027601.14	ENSMUST00000119865.8	1367	8	19104	1947	18341	-1947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCTCCCACGTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	19260614	19271587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_19260715_19265631_19265748_19269634_19269868_19271343
ENSMUSG00000027601.14_19271478_19273586_1	chr3	+	655	3	ISM	ENSMUSG00000027601.14	ENSMUST00000119865.8	1367	8	29967	-52	29204	52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCAGTGATGGAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	19271477	19273586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_19271588_19272325_19272486_19273201
ENSMUSG00000027602.10_155118463_155119092_1	chr2	+	235	3	ISM	ENSMUSG00000027602.10	ENSMUST00000029128.4	1112	4	246	901	246	-901	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAACATGAGCGAGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	155118462	155119092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155118567_155118877_155118934_155119017
ENSMUSG00000027603.16_155332299_155348282_1	chr2	-	2195	14	ISM	ENSMUSG00000027603.16	ENSMUST00000029131.11	2614	15	8486	0	8486	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCTTGATTTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	155348282	155332298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341062_155342622_155342711_155344555_155344753_155345047_155345122_155345331_155345400_155346623_155346742_155347874_155348027_155348245
ENSMUSG00000027603.16_155332299_155348367_1	chr2	-	2280	14	ISM	ENSMUSG00000027603.16	ENSMUST00000029131.11	2614	15	8401	0	8401	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCTTGATTTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	155348367	155332298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341062_155342622_155342711_155344555_155344753_155345047_155345122_155345331_155345400_155346623_155346742_155347874_155348027_155348245
ENSMUSG00000027603.16_155332299_155348426_1	chr2	-	2339	14	ISM	ENSMUSG00000027603.16	ENSMUST00000029131.11	2614	15	8342	0	8342	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCTTGATTTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	155348426	155332298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341062_155342622_155342711_155344555_155344753_155345047_155345122_155345331_155345400_155346623_155346742_155347874_155348027_155348245
ENSMUSG00000027603.16_155332531_155356642_1	chr2	-	2256	15	FSM	ENSMUSG00000027603.16	ENSMUST00000029131.11	2614	15	126	232	126	-232	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTTGTCTTCCAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	155356642	155332530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341062_155342622_155342711_155344555_155344753_155345047_155345122_155345331_155345400_155346623_155346742_155347874_155348027_155348245_155348482_155356548
ENSMUSG00000027603.16_155332593_155356768_1	chr2	-	2320	15	FSM	ENSMUSG00000027603.16	ENSMUST00000029131.11	2614	15	0	294	0	-294	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTTGCAAACCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	155356768	155332592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341062_155342622_155342711_155344555_155344753_155345047_155345122_155345331_155345400_155346623_155346742_155347874_155348027_155348245_155348482_155356548
ENSMUSG00000027605.19_155391141_155398344_1	chr2	+	660	7	ISM	ENSMUSG00000027605.19	ENSMUST00000029135.15	2931	18	31273	6322	31114	-5656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCAGACATCGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	155391140	155398344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_155391203_155391395_155391500_155391718_155391792_155392022_155392099_155392274_155392390_155397773_155397912_155398252
ENSMUSG00000027610.18_155405101_155413505_1	chr2	-	1073	5	ISM	ENSMUSG00000027610.18	ENSMUST00000130881.8	1724	12	21129	-8	21129	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCATTGTTTCATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	155413505	155405100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438
ENSMUSG00000027610.18_155405212_155414924_1	chr2	-	1043	6	ISM	ENSMUSG00000027610.18	ENSMUST00000130881.8	1724	12	19710	103	19710	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGTTCTAGTGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	155414924	155405211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843
ENSMUSG00000027610.18_155405409_155420245_1	chr2	-	1078	9	ISM	ENSMUSG00000027610.18	ENSMUST00000130881.8	1724	12	14389	300	14389	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTCCAAAGCTTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	155420245	155405408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208
ENSMUSG00000027610.18_155405561_155420712_1	chr2	-	1110	10	ISM	ENSMUSG00000027610.18	ENSMUST00000130881.8	1724	12	13922	452	13922	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCGGCAGGAGTGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	155420712	155405560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631
ENSMUSG00000027610.18_155406779_155423902_1	chr2	-	1022	10	ISM	ENSMUSG00000027610.18	ENSMUST00000130881.8	1724	12	10732	1670	10732	-1670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCTGAGCCTTTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	155423902	155406778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807
ENSMUSG00000027610.18_155406831_155423953_1	chr2	-	1021	10	ISM	ENSMUSG00000027610.18	ENSMUST00000130881.8	1724	12	10681	1722	10681	-1722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGCTGAAGGACAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	155423953	155406830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807
ENSMUSG00000027610.18_155408781_155429496_1	chr2	-	1059	10	ISM	ENSMUSG00000027610.18	ENSMUST00000079691.13	1963	13	5234	3680	5138	-3672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGAGGCCCTTGCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	155429496	155408780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361
ENSMUSG00000027610.18_155409612_155434634_1	chr2	-	1057	10	ISM	ENSMUSG00000027610.18	ENSMUST00000079691.13	1963	13	96	4511	0	-4503	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGCATTTTTCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	155434634	155409611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
ENSMUSG00000027613.16_155661752_155668738_1	chr2	-	1393	6	FSM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	107	0	107	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	4297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGCTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	155668738	155661751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
ENSMUSG00000027613.16_155661752_155668738_2	chr2	-	1398	6	NNC	ENSMUSG00000027613.16	novel	1500	6	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGCTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	155668738	155661751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_155662032_155664756_155664939_155665111_155665289_155665779_155665961_155668044_155668131_155668246
ENSMUSG00000027613.16_155661752_155668845_1	chr2	-	1498	6	NNC	ENSMUSG00000027613.16	novel	1500	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGCTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	155668845	155661751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_155662032_155664756_155664939_155665111_155665282_155665779_155665961_155668044_155668131_155668246
ENSMUSG00000027618.18_155965559_155986084_1	chr2	-	2022	13	NNC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	16	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTTGAATTTTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	155986084	155965558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981726_155984045_155984163_155985286_155985379_155985939
ENSMUSG00000027618.18_155965559_155986084_2	chr2	-	2023	13	NNC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTTGAATTTTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	155986084	155965558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985373_155985939
ENSMUSG00000027618.18_155965559_155986084_4	chr2	-	2024	13	NNC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTTGAATTTTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	155986084	155965558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973703_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
ENSMUSG00000027618.18_155965559_155986084_5	chr2	-	2022	13	NNC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTTGAATTTTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	155986084	155965558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974640_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
ENSMUSG00000027620.17_155989159_156001069_1	chr2	-	1462	7	ISM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	21089	0	20431	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	156001069	155989158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956
ENSMUSG00000027620.17_155989279_156000363_1	chr2	-	1177	6	ISM	ENSMUSG00000027620.17	ENSMUST00000146297.8	2580	17	21137	113	21137	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTCAGTGTGTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	156000363	155989278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319
ENSMUSG00000027620.17_155989540_156003553_1	chr2	-	1221	8	ISM	ENSMUSG00000027620.17	ENSMUST00000146297.8	2580	17	17947	374	17947	-85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGGATTTCAAAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	156003553	155989539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487
ENSMUSG00000027620.17_155989540_156014942_1	chr2	-	1897	13	ISM	ENSMUSG00000027620.17	ENST00000528062.7	2369	16	7137	85	6558	-85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGGATTTCAAAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	156014942	155989539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156014747
ENSMUSG00000027620.17_155989696_156019307_1	chr2	-	1793	14	ISM	ENSMUSG00000027620.17	ENST00000528062.7	2369	16	2772	241	2193	-241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTTTCAGAAACCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	156019307	155989695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156014747_156014943_156019255
ENSMUSG00000027620.17_155989860_156009670_1	chr2	-	1448	13	ISM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	12488	701	11830	-405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	156009670	155989859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604
ENSMUSG00000027620.17_155989860_156014893_1	chr2	-	1576	14	ISM	ENSMUSG00000027620.17	ENSMUST00000146297.8	2580	17	6607	694	6607	-405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	156014893	155989859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747
ENSMUSG00000027620.17_155989860_156021832_1	chr2	-	1717	16	FSM	ENSMUSG00000027620.17	ENST00000528062.7	2369	16	247	405	247	-405	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	156021832	155989859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ENSMUSG00000027620.17_155989860_156022062_1	chr2	-	1942	16	NNC	ENSMUSG00000027620.17	novel	2369	16	NA	NA	17	-405	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	156022062	155989859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_155990112_155990204_155990284_155991155_155991257_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ENSMUSG00000027620.17_155989860_156022062_2	chr2	-	1947	16	FSM	ENSMUSG00000027620.17	ENST00000528062.7	2369	16	17	405	17	-405	multi-exon	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	156022062	155989859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ENSMUSG00000027620.17_155990036_156019303_1	chr2	-	1515	15	ISM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	2855	877	2197	-581	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACTGGTTCCAAGTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	156019303	155990035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255
ENSMUSG00000027620.17_155990203_156021160_1	chr2	-	1507	15	ISM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	998	1044	340	-748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAACTGCTACGAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	156021160	155990202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096
ENSMUSG00000027620.17_155991156_156021832_1	chr2	-	1452	15	ISM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	326	1997	247	-1701	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTGATTTTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	156021832	155991155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ENSMUSG00000027620.17_155992655_156019305_1	chr2	-	1238	12	ISM	ENSMUSG00000027620.17	ENSMUST00000146297.8	2580	17	2195	3489	2195	-3200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTACATTTGTATAATA	NA	NA	NA	NA	NA	NA	NA	NA	156019305	155992654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255
ENSMUSG00000027620.17_155996159_156021160_1	chr2	-	1220	12	ISM	ENSMUSG00000027620.17	ENSMUST00000146297.8	2580	17	340	6993	340	-6704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTGCTTATATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	156021160	155996158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096
ENSMUSG00000027620.17_155996159_156022062_1	chr2	-	1494	13	ISM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	96	7000	17	-6704	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTGCTTATATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	156022062	155996158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ENSMUSG00000027620.17_156016694_156021832_1	chr2	-	341	4	FSM	ENSMUSG00000027620.17	ENSMUST00000109584.8	667	4	326	0	247	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGGATGGAATTTATGAC	NA	NA	NA	NA	NA	NA	NA	NA	156021832	156016693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_156016895_156019255_156019306_156021096_156021161_156021806
ENSMUSG00000027634.15_156769265_156833976_1	chr2	-	2579	16	NNC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	156833976	156769264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786359_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ENSMUSG00000027634.15_156769265_156833976_11	chr2	-	2579	16	NNC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	156833976	156769264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156787993_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ENSMUSG00000027634.15_156769265_156833976_2	chr2	-	2579	16	NNC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	156833976	156769264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_156770802_156773135_156773188_156773349_156773379_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ENSMUSG00000027634.15_156769265_156833976_3	chr2	-	2581	16	NNC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	156833976	156769264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800391_156800423_156811956_156812059_156833918
ENSMUSG00000027634.15_156769265_156833976_4	chr2	-	2564	15	NNC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	156833976	156769264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156811942_156812059_156833918
ENSMUSG00000027634.15_156769265_156833976_5	chr2	-	2580	16	NNC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	156833976	156769264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_156770802_156773135_156773188_156773355_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ENSMUSG00000027634.15_156769265_156833976_6	chr2	-	2581	16	NNC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	156833976	156769264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790278_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ENSMUSG00000027634.15_156769265_156833976_7	chr2	-	2572	15	NNC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	156833976	156769264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792082_156811956_156812059_156833918
ENSMUSG00000027634.15_156769265_156833976_8	chr2	-	2580	16	NNC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	156833976	156769264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779466_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ENSMUSG00000027634.15_156769265_156833976_9	chr2	-	2579	16	NNC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	156833976	156769264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782327_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ENSMUSG00000027634.15_156770006_156812063_1	chr2	-	1565	13	FSM	ENSMUSG00000027634.15	ENST00000373773.7	1563	13	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGGTGGCAGTCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	156812063	156770005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156800386_156800423_156811956
ENSMUSG00000027634.15_156770006_156812063_2	chr2	-	1558	13	NNC	ENSMUSG00000027634.15	novel	1563	13	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGGTGGCAGTCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	156812063	156770005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786359_156787936_156788000_156800386_156800423_156811956
ENSMUSG00000027634.15_156770006_156812063_3	chr2	-	1551	12	NNC	ENSMUSG00000027634.15	novel	1563	13	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGGTGGCAGTCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	156812063	156770005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788022_156811956
ENSMUSG00000027635.16_156837185_156848950_1	chr2	-	2027	10	NNC	ENSMUSG00000027635.16	novel	2080	11	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTATGTGACAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	156848950	156837184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156848876
ENSMUSG00000027637.4_156705198_156715396_1	chr2	+	678	3	FSM	ENSMUSG00000027637.4	ENST00000342422.3	832	3	69	85	69	-85	multi-exon	FALSE	canonical	NA	NA	NA	NA	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCATGGTACAATACAAGC	NA	NA	NA	NA	NA	NA	NA	NA	156705197	156715396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_156705338_156707176_156707281_156714962
ENSMUSG00000027637.4_156705271_156715483_1	chr2	+	692	3	FSM	ENSMUSG00000027637.4	ENST00000342422.3	832	3	142	-2	142	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGGCATGCCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	156705270	156715483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_156705338_156707176_156707281_156714962
ENSMUSG00000027637.4_156705302_156715022_1	chr2	+	330	4	FSM	ENSMUSG00000027637.4	ENSMUST00000029165.4	1045	4	254	461	173	-459	multi-exon	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTCCAGTCCGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	156705301	156715022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_156705338_156707176_156707281_156714257_156714388_156714962
ENSMUSG00000027637.4_156707217_156715054_1	chr2	+	286	3	ISM	ENSMUSG00000027637.4	ENSMUST00000029165.4	1045	4	2169	429	2088	-427	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACAGGTACATGCCAATT	NA	NA	NA	NA	NA	NA	NA	NA	156707216	156715054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156707281_156714257_156714388_156714962
ENSMUSG00000027637.4_156714377_156715215_1	chr2	+	264	2	ISM	ENSMUSG00000027637.4	ENSMUST00000029165.4	1045	4	9329	268	9248	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTCAACTGTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	156714376	156715215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156714388_156714962
ENSMUSG00000027639.17_156941115_156946831_1	chr2	-	527	3	ISM	ENSMUSG00000027639.17	ENSMUST00000057725.10	3926	16	30354	1662	17034	-1662	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGGTCCCATAAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	156946831	156941114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_156941424_156943640_156943779_156946751
ENSMUSG00000027639.17_156941321_156949447_1	chr2	-	538	5	ISM	ENSMUSG00000027639.17	ENSMUST00000057725.10	3926	16	27738	1868	14418	-1868	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAATATCTGCGGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	156949447	156941320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_156941424_156943640_156943779_156946751_156946857_156948150_156948244_156949348
ENSMUSG00000027639.17_156943280_156958362_1	chr2	-	1099	10	ISM	ENSMUSG00000027639.17	ENSMUST00000088523.11	1996	16	18780	0	5503	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTTCCAGAGGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	156958362	156943279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_156943364_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271
ENSMUSG00000027639.17_156943614_156963863_1	chr2	-	1048	9	FSM	ENSMUSG00000027639.17	ENST00000646066.1	1024	9	2	-26	2	26	multi-exon	FALSE	canonical	NA	NA	NA	NA	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAAAAAAGAAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	156963863	156943613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156958271_156958428_156962401_156962473_156963750
ENSMUSG00000027639.17_156943614_156963863_2	chr2	-	1042	9	NNC	ENSMUSG00000027639.17	novel	1024	9	NA	NA	2	26	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAAAAAAGAAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	156963863	156943613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_156943779_156946751_156946857_156948156_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156958271_156958428_156962401_156962473_156963750
ENSMUSG00000027642.16_157120937_157144431_1	chr2	+	1398	9	ISM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	-42	23808	-42	-23808	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGCTTTTCTTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	157120936	157144431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325
ENSMUSG00000027642.16_157121066_157154417_1	chr2	+	1382	11	ISM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	87	13822	0	-13822	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1024	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGGTACATTCATCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	157121065	157154417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396
ENSMUSG00000027642.16_157121191_157154453_1	chr2	+	1293	11	ISM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	212	13786	125	-13786	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTTTTTCCAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	157121190	157154453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396
ENSMUSG00000027642.16_157121234_157154511_1	chr2	+	1308	11	ISM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	255	13728	168	-13728	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGAAGTGGCCCCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	157121233	157154511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396
ENSMUSG00000027642.16_157125503_157156745_1	chr2	+	1335	11	ISM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	4524	11494	4437	-11494	internal_fragment	TRUE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGCTGAGCCAGATAACAA	NA	NA	NA	NA	NA	NA	NA	NA	157125502	157156745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697
ENSMUSG00000027642.16_157125503_157156791_1	chr2	+	1381	11	ISM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	4524	11448	4437	-11448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCTGAAAGGAAGATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	157125502	157156791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697
ENSMUSG00000027642.16_157125635_157156850_1	chr2	+	1308	11	ISM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	4656	11389	4569	-11389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGGGGATGCCACATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	157125634	157156850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697
ENSMUSG00000027642.16_157131446_157158129_1	chr2	+	1376	11	ISM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	10467	10110	10380	-10110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGCCCAAAGCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	157131445	157158129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042
ENSMUSG00000027642.16_157132455_157159962_1	chr2	+	1376	11	ISM	ENSMUSG00000027642.16	ENSMUST00000029171.6	2621	17	11389	8277	11389	-8277	internal_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCGACATCATTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	157132454	157159962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866
ENSMUSG00000027642.16_157132564_157162071_1	chr2	+	1298	12	ISM	ENSMUSG00000027642.16	ENSMUST00000029171.6	2621	17	11498	6168	11498	-6168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATTTGCTCCTAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	157132563	157162071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040
ENSMUSG00000027642.16_157136073_157163792_1	chr2	+	1404	12	ISM	ENSMUSG00000027642.16	ENSMUST00000029171.6	2621	17	15007	4447	15007	-4447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGCTGGGATGAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	157136072	157163792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662
ENSMUSG00000027642.16_157137172_157167655_1	chr2	+	1355	12	ISM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	16193	584	16106	-584	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGACCCTGAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	157137171	157167655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ENSMUSG00000027642.16_157139342_157167788_1	chr2	+	1311	11	ISM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	18363	451	18276	-451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGTTTACTTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	157139341	157167788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ENSMUSG00000027642.16_157141460_157167976_1	chr2	+	1363	10	ISM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	20481	263	20394	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	157141459	157167976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ENSMUSG00000027642.16_157152119_157168239_1	chr2	+	1402	8	ISM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	31140	0	31053	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTTCTTCTGTGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	157152118	157168239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ENSMUSG00000027646.16_157297591_157313653_1	chr2	+	3485	12	ISM	ENSMUSG00000027646.16	ENSMUST00000029175.14	3906	14	31391	129	0	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTGGGGATCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	157297590	157313653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ENSMUSG00000027649.16_157579321_157621763_1	chr2	+	380	3	ISM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	0	111771	0	-111247	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTCTCACATTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	157579320	157621763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157579480_157616330_157616520_157621731
ENSMUSG00000027649.16_157579439_157630972_1	chr2	+	398	4	ISM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	118	102562	2	-102038	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGACCTGTACCACCT	NA	NA	NA	NA	NA	NA	NA	NA	157579438	157630972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911
ENSMUSG00000027649.16_157616331_157661522_1	chr2	+	1001	9	ISM	ENSMUSG00000027649.16	ENST00000628103.2	1778	16	36894	71488	36894	-71488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCCCCAGTCCTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	157616330	157661522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373
ENSMUSG00000027649.16_157616438_157678496_1	chr2	+	964	10	NNC	ENSMUSG00000027649.16	novel	2442	16	NA	NA	37001	-54514	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACAACTGCCACAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	157616437	157678496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_157616520_157621731_157621839_157630911_157631067_157641358_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429
ENSMUSG00000027649.16_157616445_157678501_1	chr2	+	959	10	ISM	ENSMUSG00000027649.16	ENST00000628103.2	1778	16	37008	54509	37008	-54509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGCCACAAGTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	157616444	157678501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429
ENSMUSG00000027649.16_157616446_157678495_1	chr2	+	952	10	ISM	ENSMUSG00000027649.16	ENST00000628103.2	1778	16	37009	54515	37009	-54515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGACAACTGCCACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	157616445	157678495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429
ENSMUSG00000027649.16_157621730_157678611_1	chr2	+	995	9	NNC	ENSMUSG00000027649.16	novel	2442	16	NA	NA	42293	-54399	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGTTCACTGTAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	157621729	157678611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_157621839_157630911_157631045_157641340_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429
ENSMUSG00000027649.16_157621778_157710246_1	chr2	+	975	10	ISM	ENSMUSG00000027649.16	ENST00000628103.2	1778	16	42341	22764	42341	-22764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCGCAACCTGAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	157621777	157710246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219
ENSMUSG00000027649.16_157621811_157710257_1	chr2	+	956	10	NNC	ENSMUSG00000027649.16	novel	2442	16	NA	NA	42374	-22753	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGAGGGCAGCAGCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	157621810	157710257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_157621839_157630911_157631067_157641358_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219
ENSMUSG00000027649.16_157630912_157710319_1	chr2	+	981	9	NNC	ENSMUSG00000027649.16	novel	2442	16	NA	NA	51475	-22691	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGACCGTGGCCATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	157630911	157710319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_157631046_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219
ENSMUSG00000027649.16_157630912_157713108_1	chr2	+	1066	10	ISM	ENSMUSG00000027649.16	ENST00000628103.2	1778	16	51475	19902	51475	-19902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTACCCTGCCCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	157630911	157713108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027
ENSMUSG00000027649.16_157641347_157726190_1	chr2	+	1064	10	ISM	ENSMUSG00000027649.16	ENST00000628103.2	1778	16	61910	6820	61910	-6820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGAGGGTTCCTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	157641346	157726190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052
ENSMUSG00000027649.16_157648594_157726420_1	chr2	+	1040	10	ISM	ENSMUSG00000027649.16	ENST00000628103.2	1778	16	69157	6590	69157	-6590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	880	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTGGGTGCTGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	157648593	157726420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347
ENSMUSG00000027649.16_157651416_157732865_1	chr2	+	955	10	ISM	ENSMUSG00000027649.16	ENST00000628103.2	1778	16	71979	145	71979	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGAGACCGAGCAGAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	157651415	157732865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ENSMUSG00000027649.16_157659673_157733011_1	chr2	+	1042	9	ISM	ENSMUSG00000027649.16	ENST00000628103.2	1778	16	80236	-1	80236	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1017	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGGCTGACATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	157659672	157733011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ENSMUSG00000027650.13_157823723_157850740_1	chr2	-	3232	7	FSM	ENSMUSG00000027650.13	ENSMUST00000109522.2	3765	7	542	-9	542	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGAGATTTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	157850740	157823722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938
ENSMUSG00000027650.13_157824031_157851051_1	chr2	-	3235	7	FSM	ENSMUSG00000027650.13	ENSMUST00000109522.2	3765	7	231	299	231	-299	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTCACTCTTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	157851051	157824030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938
ENSMUSG00000027650.13_157824256_157851282_1	chr2	-	3241	7	FSM	ENSMUSG00000027650.13	ENSMUST00000109522.2	3765	7	0	524	0	-524	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTCAGCCACAGAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	157851282	157824255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938
ENSMUSG00000027651.17_157870870_157917573_1	chr2	+	1497	7	FSM	ENSMUSG00000027651.17	ENSMUST00000103123.10	4504	7	453	2554	151	-2554	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTAAGATTCGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	157870869	157917573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889838_157889949_157892006_157892134_157900571_157900748_157916849
ENSMUSG00000027654.3_158610324_158621786_1	chr2	+	206	2	ISM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	311	6771	311	-6771	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTCAGACATCGACATC	NA	NA	NA	NA	NA	NA	NA	NA	158610323	158621786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_158610508_158621764
ENSMUSG00000027654.3_158610385_158621835_1	chr2	+	194	2	ISM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	372	6722	372	-6722	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGGGTGGCTGTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	158610384	158621835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_158610508_158621764
ENSMUSG00000027654.3_158610433_158621893_1	chr2	+	204	2	ISM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	420	6664	420	-6664	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCATGGATCTGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	158610432	158621893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_158610508_158621764
ENSMUSG00000027654.3_158621878_158627097_1	chr2	+	198	3	ISM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	11865	1460	11865	-1460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATTAAACAGCAGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	158621877	158627097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_158621933_158625052_158625178_158627079
ENSMUSG00000027655.15_158643304_158676868_1	chr2	+	1159	11	ISM	ENSMUSG00000027655.15	ENST00000373323.8	1987	20	10	22183	10	-22183	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCCTAGGGATAGACA	NA	NA	NA	NA	NA	NA	NA	NA	158643303	158676868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_158643429_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789
ENSMUSG00000027655.15_158643362_158676868_1	chr2	+	1101	11	ISM	ENSMUSG00000027655.15	ENST00000373323.8	1987	20	68	22183	68	-22183	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCCTAGGGATAGACA	NA	NA	NA	NA	NA	NA	NA	NA	158643361	158676868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_158643429_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789
ENSMUSG00000027655.15_158643406_158678598_1	chr2	+	1141	12	ISM	ENSMUSG00000027655.15	ENST00000373323.8	1987	20	112	20453	112	-20453	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTATGCTCTCGGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	158643405	158678598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_158643429_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560
ENSMUSG00000027655.15_158648841_158682566_1	chr2	+	1233	12	ISM	ENSMUSG00000027655.15	ENST00000373323.8	1987	20	5547	16485	5547	-16485	internal_fragment	TRUE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGGAGCCTGATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	158648840	158682566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470
ENSMUSG00000027655.15_158657419_158684268_1	chr2	+	1128	12	ISM	ENSMUSG00000027655.15	ENST00000373323.8	1987	20	14125	14783	14125	-14783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGATCCAGAATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	158657418	158684268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224
ENSMUSG00000027655.15_158659281_158684853_1	chr2	+	1223	12	ISM	ENSMUSG00000027655.15	ENST00000373323.8	1987	20	15987	14198	15987	-14198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCACAGCCACCCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	158659280	158684853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775
ENSMUSG00000027655.15_158662304_158686127_1	chr2	+	1221	11	ISM	ENSMUSG00000027655.15	ENST00000373323.8	1987	20	19010	12924	19010	-12924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGTGGCCAGCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	158662303	158686127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997
ENSMUSG00000027655.15_158668223_158688909_1	chr2	+	1243	11	ISM	ENSMUSG00000027655.15	ENST00000373323.8	1987	20	24929	10142	24929	-10142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAGACTCTGAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	158668222	158688909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827
ENSMUSG00000027655.15_158669821_158691473_1	chr2	+	1202	11	ISM	ENSMUSG00000027655.15	ENST00000373323.8	1987	20	26527	7578	26527	-7578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCCCCTCCCCCGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	158669820	158691473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401
ENSMUSG00000027655.15_158671421_158693742_1	chr2	+	1217	11	ISM	ENSMUSG00000027655.15	ENST00000373323.8	1987	20	28127	5309	28127	-5309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAATGGGTAGAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	158671420	158693742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630
ENSMUSG00000027655.15_158671540_158699017_1	chr2	+	1116	12	ISM	ENSMUSG00000027655.15	ENST00000373323.8	1987	20	28246	34	28246	-34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGGCCAAGGTCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	158671539	158699017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ENSMUSG00000027660.17_31150851_31152041_1	chr3	+	710	2	ISM	ENSMUSG00000027660.17	ENST00000426052.6	2392	8	1488	20922	-131	-20922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTATTGTTCAAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	31150850	31152041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_31151020_31151500
ENSMUSG00000027660.17_31151825_31165793_1	chr3	+	768	2	NNC	ENSMUSG00000027660.17	novel	2904	6	NA	NA	843	-7170	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTGCCATCATGGTATC	NA	NA	NA	NA	NA	NA	NA	NA	31151824	31165793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_31152573_31165773
ENSMUSG00000027660.17_31151964_31167608_1	chr3	+	755	3	ISM	ENSMUSG00000027660.17	ENSMUST00000118204.2	2904	6	982	5532	982	-5355	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGCGTCCCAGTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	31151963	31167608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_31152569_31165773_31165872_31167556
ENSMUSG00000027660.17_31152030_31167651_1	chr3	+	732	3	ISM	ENSMUSG00000027660.17	ENSMUST00000118204.2	2904	6	1048	5489	1048	-5312	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCCACCTCCAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	31152029	31167651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_31152569_31165773_31165872_31167556
ENSMUSG00000027660.17_31152079_31167708_1	chr3	+	740	3	ISM	ENSMUSG00000027660.17	ENSMUST00000118204.2	2904	6	1097	5432	1097	-5255	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTCTTACCCAGACGTC	NA	NA	NA	NA	NA	NA	NA	NA	31152078	31167708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_31152569_31165773_31165872_31167556
ENSMUSG00000027660.17_31152213_31171027_1	chr3	+	750	4	ISM	ENSMUSG00000027660.17	ENSMUST00000118204.2	2904	6	1231	2113	1231	-1936	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGGCACAAGCAAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	31152212	31171027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_31152569_31165773_31165872_31167556_31167790_31170964
ENSMUSG00000027660.17_31152285_31171096_1	chr3	+	747	4	ISM	ENSMUSG00000027660.17	ENSMUST00000118204.2	2904	6	1303	2044	1303	-1867	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGGAAGATCATGGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	31152284	31171096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_31152569_31165773_31165872_31167556_31167790_31170964
ENSMUSG00000027660.17_31152438_31171576_1	chr3	+	741	5	ISM	ENSMUSG00000027660.17	ENSMUST00000118204.2	2904	6	1456	1564	1456	-1387	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATCTACAGAAAGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	31152437	31171576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_31152569_31165773_31165872_31167556_31167790_31170964_31171189_31171521
ENSMUSG00000027660.17_31152466_31171654_1	chr3	+	791	5	ISM	ENSMUSG00000027660.17	ENSMUST00000118204.2	2904	6	1484	1486	1484	-1309	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTAGAGAAAAAGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	31152465	31171654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_31152569_31165773_31165872_31167556_31167790_31170964_31171189_31171521
ENSMUSG00000027660.17_31152535_31171691_1	chr3	+	759	5	ISM	ENSMUSG00000027660.17	ENSMUST00000118204.2	2904	6	1553	1449	1553	-1272	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACCTGTGACTCAACCT	NA	NA	NA	NA	NA	NA	NA	NA	31152534	31171691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_31152569_31165773_31165872_31167556_31167790_31170964_31171189_31171521
ENSMUSG00000027660.17_31165772_31172629_1	chr3	+	808	5	ISM	ENSMUSG00000027660.17	ENSMUST00000118204.2	2904	6	14790	511	14790	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTGAGGCCGACAGGC	NA	NA	NA	NA	NA	NA	NA	NA	31165771	31172629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_31165872_31167556_31167790_31170964_31171189_31171521_31171747_31172603
ENSMUSG00000027660.17_31170963_31172963_1	chr3	+	811	3	ISM	ENSMUSG00000027660.17	ENSMUST00000118204.2	2904	6	19981	177	19981	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGGGCTTGGTAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	31170962	31172963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_31171189_31171521_31171747_31172603
ENSMUSG00000027663.13_32395546_32415190_1	chr3	-	842	5	ISM	ENSMUSG00000027663.13	ENSMUST00000168566.3	7672	7	4579	6601	4579	1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGCTTAGTGCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	32415190	32395545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038
ENSMUSG00000027663.13_32395800_32419674_1	chr3	-	794	6	NIC	ENSMUSG00000027663.13	novel	1191	6	NA	NA	95	-253	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCATGTGCGTGACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	32419674	32395799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419643
ENSMUSG00000027663.13_32397483_32419827_1	chr3	-	902	5	ISM	ENSMUSG00000027663.13	ENST00000311417.7	1191	6	-12	1936	0	-1936	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCCTGTGTTTCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	32419827	32397482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419643
ENSMUSG00000027668.14_32608339_32618390_1	chr3	+	810	7	ISM	ENSMUSG00000027668.14	ENSMUST00000118286.8	2789	17	22636	13112	22636	-13112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGATTCCTGGGTTCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	32608338	32618390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224
ENSMUSG00000027669.15_32639204_32650508_1	chr3	-	749	6	NNC	ENSMUSG00000027669.15	novel	828	6	NA	NA	26	-51	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	961	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCAACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	32650508	32639203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_32639376_32643859_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425
ENSMUSG00000027669.15_32639204_32650508_2	chr3	-	743	6	NNC	ENSMUSG00000027669.15	novel	828	6	NA	NA	26	-51	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCAACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	32650508	32639203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_32639376_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647363_32650425
ENSMUSG00000027669.15_32639204_32650508_3	chr3	-	751	6	FSM	ENSMUSG00000027669.15	ENST00000466899.6	828	6	26	51	26	-51	multi-exon	FALSE	canonical	NA	NA	NA	NA	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCAACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	32650508	32639203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_32639376_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425
ENSMUSG00000027671.15_32762699_32772589_1	chr3	+	950	7	ISM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	43	8533	43	-8533	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTCATTCCTCCTTACA	NA	NA	NA	NA	NA	NA	NA	NA	32762698	32772589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516
ENSMUSG00000027671.15_32762914_32774385_1	chr3	+	972	10	ISM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	258	6737	258	-6737	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGATTTTGGGGCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	32762913	32774385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334
ENSMUSG00000027671.15_32766015_32774664_1	chr3	+	1003	10	ISM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	3359	6458	3359	-6458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGCCAGTCTCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	32766014	32774664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583
ENSMUSG00000027671.15_32766321_32776841_1	chr3	+	926	10	ISM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	3665	4281	3665	-4281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTCTCAGAAAACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	32766320	32776841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768
ENSMUSG00000027671.15_32766321_32779428_1	chr3	+	982	11	ISM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	3665	1694	3665	-1694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGTGGAGCGGAGGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	32766320	32779428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395
ENSMUSG00000027671.15_32768703_32780701_1	chr3	+	926	11	ISM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	6047	421	6047	-421	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAATATGAAGAAGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	32768702	32780701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ENSMUSG00000027671.15_32769636_32780922_1	chr3	+	1012	10	ISM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	6980	200	6980	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCACTTATTCTTATTAC	NA	NA	NA	NA	NA	NA	NA	NA	32769635	32780922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ENSMUSG00000027671.15_32772716_32781122_1	chr3	+	983	7	ISM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	10060	0	10060	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGGATTTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	32772715	32781122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ENSMUSG00000027673.13_32791139_32805715_1	chr3	+	1073	6	NNC	ENSMUSG00000027673.13	novel	1079	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTGCTTTACTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	32791138	32805715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_32791355_32799002_32799092_32800596_32800664_32801882_32801939_32802609_32802717_32805177
ENSMUSG00000027673.13_32791139_32805715_2	chr3	+	1073	6	NNC	ENSMUSG00000027673.13	novel	1079	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTGCTTTACTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	32791138	32805715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802711_32805177
ENSMUSG00000027673.13_32791276_32805715_1	chr3	+	936	6	NNC	ENSMUSG00000027673.13	novel	1079	6	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTGCTTTACTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	32791275	32805715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802711_32805177
ENSMUSG00000027673.13_32791276_32805715_2	chr3	+	942	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	137	0	56	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTGCTTTACTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	32791275	32805715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ENSMUSG00000027673.13_32791276_32805715_3	chr3	+	936	6	NNC	ENSMUSG00000027673.13	novel	1079	6	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTGCTTTACTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	32791275	32805715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_32791355_32799002_32799092_32800596_32800664_32801882_32801939_32802609_32802717_32805177
ENSMUSG00000027674.17_33004552_33134685_1	chr3	-	2126	14	ISM	ENSMUSG00000027674.17	ENST00000476138.5	2314	15	2467	0	1532	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCGCTTCCAAATTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	33134685	33004551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_33005023_33006619_33006778_33007184_33007351_33008476_33008675_33009910_33009982_33010821_33010966_33012894_33013012_33047054_33047151_33058452_33058550_33060068_33060193_33061270_33061466_33069113_33069226_33078844_33078950_33134613
ENSMUSG00000027674.17_33004668_33134685_1	chr3	-	2010	14	ISM	ENSMUSG00000027674.17	ENST00000476138.5	2314	15	2467	116	1532	56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGGGAATTGATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	33134685	33004667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_33005023_33006619_33006778_33007184_33007351_33008476_33008675_33009910_33009982_33010821_33010966_33012894_33013012_33047054_33047151_33058452_33058550_33060068_33060193_33061270_33061466_33069113_33069226_33078844_33078950_33134613
ENSMUSG00000027674.17_33004779_33137178_1	chr3	-	2113	15	FSM	ENSMUSG00000027674.17	ENST00000476138.5	2314	15	-26	227	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGTGTTATTATACTAA	NA	NA	NA	NA	NA	NA	NA	NA	33137178	33004778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_33005023_33006619_33006778_33007184_33007351_33008476_33008675_33009910_33009982_33010821_33010966_33012894_33013012_33047054_33047151_33058452_33058550_33060068_33060193_33061270_33061466_33069113_33069226_33078844_33078950_33134613_33134686_33136964
ENSMUSG00000027674.17_33004779_33197041_1	chr3	-	1871	14	FSM	ENSMUSG00000027674.17	ENST00000465751.5	1850	14	8	-29	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGTGTTATTATACTAA	NA	NA	NA	NA	NA	NA	NA	NA	33197041	33004778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_33005023_33006619_33006778_33007184_33007351_33008476_33008675_33009910_33009982_33010821_33010966_33012894_33013012_33047054_33047151_33058452_33058550_33060068_33060193_33061270_33061466_33069113_33069226_33078844_33078950_33196997
ENSMUSG00000027674.17_33047055_33134685_1	chr3	-	696	6	ISM	ENSMUSG00000027674.17	ENSMUST00000108225.10	3109	14	1532	43498	1532	-42247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAACTCTTTAAAACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	33134685	33047054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_33047151_33058452_33058550_33060068_33060193_33061270_33061466_33069113_33069226_33134613
ENSMUSG00000027674.17_33047119_33078887_1	chr3	-	408	5	ISM	ENSMUSG00000027674.17	ENST00000392649.7	2326	12	136	42960	136	-42311	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTGCTCTCCAGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	33078887	33047118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_33047151_33058452_33058550_33060068_33060193_33069113_33069226_33078844
ENSMUSG00000027674.17_33058452_33197041_1	chr3	-	645	6	ISM	ENSMUSG00000027674.17	ENST00000485199.5	2821	14	363	54293	8	-53644	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAAAAGTGAATCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	33197041	33058451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_33058550_33060068_33060193_33061270_33061466_33069113_33069226_33134613_33134686_33196997
ENSMUSG00000027674.17_33060067_33197225_1	chr3	-	733	5	ISM	ENSMUSG00000027674.17	ENST00000485199.5	2821	14	179	55908	6	-55259	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTCCTGATGCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	33197225	33060066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_33060193_33061270_33061466_33069113_33069226_33134613_33134686_33196997
ENSMUSG00000027674.17_33061271_33197332_1	chr3	-	714	4	ISM	ENSMUSG00000027674.17	ENST00000485199.5	2821	14	72	57112	72	-56463	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGCAAAGGTTTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	33197332	33061270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_33061466_33069113_33069226_33134613_33134686_33196997
ENSMUSG00000027676.12_33868391_33870152_1	chr3	-	542	5	ISM	ENSMUSG00000027676.12	ENST00000651046.1	2418	18	28192	-2	28192	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCCGAGCTCGAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	33870152	33868390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_33868416_33868501_33868679_33868803_33868945_33869560_33869668_33870060
ENSMUSG00000027676.12_33868391_33898292_1	chr3	-	2400	18	FSM	ENSMUSG00000027676.12	ENST00000651576.1	2450	18	52	-2	52	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCCGAGCTCGAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	33898292	33868390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_33868416_33868501_33868679_33868803_33868945_33869560_33869668_33870976_33871101_33873956_33874166_33875525_33875664_33879539_33879705_33880603_33880799_33884173_33884307_33884805_33884910_33886676_33886869_33890864_33890994_33891088_33891182_33891954_33892117_33893226_33893374_33895217_33895338_33898253
ENSMUSG00000027676.12_33868525_33871016_1	chr3	-	602	5	ISM	ENSMUSG00000027676.12	ENST00000651046.1	2418	18	27328	132	27328	-132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTAAAACATATTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	33871016	33868524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_33868679_33868803_33868945_33869560_33869668_33870060_33870221_33870976
ENSMUSG00000027676.12_33868574_33871068_1	chr3	-	605	5	ISM	ENSMUSG00000027676.12	ENST00000651046.1	2418	18	27276	181	27276	-181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGACCAAATGTTAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	33871068	33868573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_33868679_33868803_33868945_33869560_33869668_33870060_33870221_33870976
ENSMUSG00000027676.12_33879599_33890939_1	chr3	-	613	5	ISM	ENSMUSG00000027676.12	ENST00000651046.1	2418	18	7405	11206	7405	-11206	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATGGATGAGAAAAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	33890939	33879598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_33879705_33880603_33880799_33884173_33884307_33884805_33884910_33890864
ENSMUSG00000027676.12_33879668_33891000_1	chr3	-	605	5	ISM	ENSMUSG00000027676.12	ENST00000651046.1	2418	18	7344	11275	7344	-11275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTAAAAGGAGAAATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	33891000	33879667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_33879705_33880603_33880799_33884173_33884307_33884805_33884910_33890864
ENSMUSG00000027676.12_33880678_33891977_1	chr3	-	603	6	ISM	ENSMUSG00000027676.12	ENST00000651046.1	2418	18	6367	12285	6367	-12285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAACATCTTAACAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	33891977	33880677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_33880799_33884173_33884307_33884805_33884910_33890864_33890994_33891088_33891182_33891954
ENSMUSG00000027676.12_33880731_33892041_1	chr3	-	614	6	ISM	ENSMUSG00000027676.12	ENST00000651046.1	2418	18	6303	12338	6303	-12338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAGCGAAAGAGAAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	33892041	33880730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_33880799_33884173_33884307_33884805_33884910_33890864_33890994_33891088_33891182_33891954
ENSMUSG00000027676.12_33884244_33893276_1	chr3	-	601	6	ISM	ENSMUSG00000027676.12	ENST00000651046.1	2418	18	5068	15851	5068	-15851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCTATCTATTGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	33893276	33884243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_33884307_33884805_33884910_33890864_33890994_33891088_33891182_33891954_33892117_33893226
ENSMUSG00000027679.14_34131428_34135459_1	chr3	-	643	6	NNC	ENSMUSG00000027679.14	novel	659	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1035	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTCATTGCTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	34135459	34131427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134427_34135334
ENSMUSG00000027679.14_34131428_34135459_2	chr3	-	643	6	NNC	ENSMUSG00000027679.14	novel	659	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1027	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTCATTGCTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	34135459	34131427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_34131674_34132923_34132995_34133358_34133434_34134232_34134307_34134379_34134432_34135334
ENSMUSG00000027679.14_34131428_34135459_3	chr3	-	642	6	NNC	ENSMUSG00000027679.14	novel	659	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1030	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTCATTGCTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	34135459	34131427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135340
ENSMUSG00000027680.16_34074247_34103472_1	chr3	+	669	6	ISM	ENSMUSG00000027680.16	ENST00000491062.5	1767	14	0	19889	0	-19889	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTGTCTGCTTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	34074246	34103472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_34074313_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301
ENSMUSG00000027680.16_34074247_34123361_1	chr3	+	2001	15	FSM	ENSMUSG00000027680.16	ENSMUST00000198051.5	2127	15	-7	133	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAAGGGGAGGGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	34074246	34123361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34123065
ENSMUSG00000027680.16_34074247_34123494_1	chr3	+	2307	17	FSM	ENSMUSG00000027680.16	ENSMUST00000001620.13	2459	17	155	-3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	34074246	34123494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34119122_34119204_34122309_34122402_34123065
ENSMUSG00000027680.16_34101852_34116028_1	chr3	+	666	8	ISM	ENSMUSG00000027680.16	ENST00000491062.5	1767	14	27605	7333	27595	-7333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGAGTGATTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	34101851	34116028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976
ENSMUSG00000027680.16_34103338_34116080_1	chr3	+	636	7	ISM	ENSMUSG00000027680.16	ENST00000491062.5	1767	14	29091	7281	29081	-7281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCGAGACAGCAGGAGACG	NA	NA	NA	NA	NA	NA	NA	NA	34103337	34116080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976
ENSMUSG00000027680.16_34103404_34116130_1	chr3	+	620	7	ISM	ENSMUSG00000027680.16	ENST00000491062.5	1767	14	29157	7231	29147	-7231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACGAGGTCGTGGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	34103403	34116130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976
ENSMUSG00000027680.16_34104258_34118324_1	chr3	+	624	7	ISM	ENSMUSG00000027680.16	ENST00000491062.5	1767	14	30011	5037	30001	-5037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGCAGACACTGACGCC	NA	NA	NA	NA	NA	NA	NA	NA	34104257	34118324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267
ENSMUSG00000027680.16_34108370_34118468_1	chr3	+	724	6	ISM	ENSMUSG00000027680.16	ENST00000491062.5	1767	14	34123	4893	34113	-4893	internal_fragment	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTAAGCACTTAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	34108369	34118468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267
ENSMUSG00000027680.16_34110502_34123129_1	chr3	+	654	6	ISM	ENSMUSG00000027680.16	ENST00000491062.5	1767	14	36255	232	36245	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCGATGAAATTCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	34110501	34123129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ENSMUSG00000027680.16_34115976_34123361_1	chr3	+	702	3	ISM	ENSMUSG00000027680.16	ENST00000491062.5	1767	14	41729	0	41719	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAAGGGGAGGGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	34115975	34123361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_34116181_34118267_34118469_34123065
ENSMUSG00000027694.10_60784446_60785008_1	chr3	+	444	2	FSM	ENSMUSG00000027694.10	ENST00000430836.1	443	2	0	-1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCAAGGCCCCGGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	60784445	60785008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_60784468_60784586
ENSMUSG00000027698.15_27237114_27297405_1	chr3	+	2778	5	FSM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	0	1702	0	-1702	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGATATTTTATTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	27237113	27297405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349
ENSMUSG00000027698.15_27276896_27297676_1	chr3	+	2719	4	ISM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	39782	1431	39743	-1431	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGCCAGAGTGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	27276895	27297676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_27277046_27280221_27280292_27293680_27293853_27295349
ENSMUSG00000027698.15_27280243_27297902_1	chr3	+	2774	3	ISM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	43129	1205	43090	-1205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGGAATTTACTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	27280242	27297902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_27280292_27293680_27293853_27295349
ENSMUSG00000027698.15_27293802_27298011_1	chr3	+	2713	2	ISM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	56688	1096	56649	-1096	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCTGCATATGGAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	27293801	27298011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_27293853_27295349
ENSMUSG00000027699.20_27151537_27201061_1	chr3	-	3343	21	ISM	ENSMUSG00000027699.20	ENSMUST00000176242.9	3985	24	6942	165	6942	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTACATAATTTTCAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	27201061	27151536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985
ENSMUSG00000027699.20_27151820_27204284_1	chr3	-	3354	23	ISM	ENSMUSG00000027699.20	ENSMUST00000176242.9	3985	24	3719	448	3719	-448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTGAAAACTGTGTTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	27204284	27151819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27203141_27203222_27204177
ENSMUSG00000027699.20_27151939_27207935_1	chr3	-	3350	24	FSM	ENSMUSG00000027699.20	ENSMUST00000176242.9	3985	24	68	567	68	-567	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACTTTATAATTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	27207935	27151938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27203141_27203222_27204177_27204330_27207865
ENSMUSG00000027706.9_30847485_30872769_1	chr3	+	863	8	FSM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	461	2643	3	-1130	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGTACAAAGGACCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	30847484	30872769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
ENSMUSG00000027706.9_30855204_30872905_1	chr3	+	847	6	ISM	ENSMUSG00000027706.9	ENST00000480708.5	1416	9	7722	994	7722	-994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGACCAGAAGGCTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	30855203	30872905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
ENSMUSG00000027706.9_30864049_30873150_1	chr3	+	903	5	ISM	ENSMUSG00000027706.9	ENST00000480708.5	1416	9	16567	749	16567	-749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGTTTTCTGTGTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	30864048	30873150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
ENSMUSG00000027706.9_30864049_30873899_1	chr3	+	1652	5	ISM	ENSMUSG00000027706.9	ENST00000480708.5	1416	9	16567	0	16567	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTATTTAGACATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30864048	30873899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
ENSMUSG00000027706.9_30864592_30873768_1	chr3	+	816	5	ISM	ENSMUSG00000027706.9	ENST00000480708.5	1416	9	17110	131	17110	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTCATCTCCAGCAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	30864591	30873768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_30864687_30866444_30866506_30868382_30868503_30872648_30873150_30873729
ENSMUSG00000027706.9_30864592_30873899_1	chr3	+	947	5	ISM	ENSMUSG00000027706.9	ENST00000480708.5	1416	9	17110	0	17110	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTATTTAGACATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30864591	30873899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_30864687_30866444_30866506_30868382_30868503_30872648_30873150_30873729
ENSMUSG00000027706.9_30866443_30873899_1	chr3	+	854	4	ISM	ENSMUSG00000027706.9	ENST00000480708.5	1416	9	18961	0	18961	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTATTTAGACATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30866442	30873899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_30866506_30868382_30868503_30872648_30873150_30873729
ENSMUSG00000027706.9_30866458_30874181_1	chr3	+	1701	3	ISM	ENSMUSG00000027706.9	ENST00000480708.5	1416	9	18976	-282	18976	282	intron_retention	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGACAATTTGCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	30866457	30874181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_30866506_30868382_30868503_30872648
ENSMUSG00000027708.15_35946254_35987308_1	chr3	-	4667	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	313	0	313	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTTTATTGCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	35987308	35946253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ENSMUSG00000027708.15_35946254_35987363_1	chr3	-	4722	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	258	0	258	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTTTATTGCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	35987363	35946253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ENSMUSG00000027708.15_35946489_35987621_1	chr3	-	4745	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	0	235	0	-235	multi-exon	FALSE	canonical	NA	NA	NA	NA	1647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCTTTTTGTTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	35987621	35946488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ENSMUSG00000027708.15_35949795_35975337_1	chr3	-	752	6	ISM	ENSMUSG00000027708.15	ENSMUST00000198389.5	3020	7	8886	2140	0	-26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGGGACAAAAAGTACAACA	NA	NA	NA	NA	NA	NA	NA	NA	35975337	35949794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119
ENSMUSG00000027708.15_35949795_35991588_1	chr3	-	843	7	FSM	ENSMUSG00000027708.15	ENST00000469954.5	914	7	-11	82	-11	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGGGACAAAAAGTACAACA	NA	NA	NA	NA	NA	NA	NA	NA	35991588	35949794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35991496
ENSMUSG00000027709.10_36013982_36033199_1	chr3	-	1391	10	ISM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	21628	0	14965	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGAGCTGTAGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	36033199	36013981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071
ENSMUSG00000027709.10_36014154_36039147_1	chr3	-	1318	12	ISM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	15680	172	9017	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	751	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAACTGTGTCCAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	36039147	36014153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130
ENSMUSG00000027709.10_36014224_36039188_1	chr3	-	1289	12	ISM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	15639	242	8976	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCCAAGCCAACAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	36039188	36014223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130
ENSMUSG00000027709.10_36017730_36050070_1	chr3	-	1632	14	NIC	ENSMUSG00000027709.10	novel	1627	14	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGGGACATCTGTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	36050070	36017729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_-_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929
ENSMUSG00000027709.10_36017730_36050070_2	chr3	-	1626	14	NNC	ENSMUSG00000027709.10	novel	1627	14	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGGGACATCTGTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	36050070	36017729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_36017842_36018475_36018614_36022572_36022617_36026626_36026714_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929
ENSMUSG00000027709.10_36017730_36050070_3	chr3	-	1631	14	NNC	ENSMUSG00000027709.10	novel	1627	14	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	666	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGGGACATCTGTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	36050070	36017729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039131_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929
ENSMUSG00000027709.10_36017814_36044238_1	chr3	-	1299	12	ISM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	10589	3832	3926	-82	internal_fragment	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAAGTACTTGTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	36044238	36017813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197
ENSMUSG00000027709.10_36018475_36044345_1	chr3	-	1379	11	ISM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	10482	4493	3819	-743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAGCTCTCACTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	36044345	36018474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197
ENSMUSG00000027709.10_36018551_36044081_1	chr3	-	1122	10	ISM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	10746	4569	4083	-819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTCTATTAATGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	36044081	36018550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992
ENSMUSG00000027709.10_36022573_36044989_1	chr3	-	1384	11	ISM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	9838	8591	3175	-4841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCCTTGTTGGTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	36044989	36022572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845
ENSMUSG00000027709.10_36028281_36050028_1	chr3	-	1362	11	ISM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	4799	14299	42	-10549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGCTCATCCTCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	36050028	36028280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929
ENSMUSG00000027709.10_36028337_36048141_1	chr3	-	1188	10	ISM	ENSMUSG00000027709.10	ENST00000492597.5	1707	14	23	10605	23	-10605	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACCTGCTGCCGAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	36048141	36028336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064
ENSMUSG00000027709.10_36028337_36050032_1	chr3	-	1310	11	ISM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	4795	14355	38	-10605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACCTGCTGCCGAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	36050032	36028336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929
ENSMUSG00000027709.10_36033161_36048117_1	chr3	-	556	6	ISM	ENSMUSG00000027709.10	ENST00000610757.4	1722	14	1953	15429	47	-15429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCATGGAGATGAACACC	NA	NA	NA	NA	NA	NA	NA	NA	36048117	36033160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36048064
ENSMUSG00000027709.10_36037923_36050028_1	chr3	-	618	6	ISM	ENSMUSG00000027709.10	ENST00000610757.4	1722	14	42	20191	42	-20191	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTCAGAGCTGCGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	36050028	36037922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36048064_36048161_36049929
ENSMUSG00000027710.15_36120216_36130960_1	chr3	+	777	7	ISM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	88	16042	0	791	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACCGCATTCATAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	36120215	36130960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870
ENSMUSG00000027710.15_36120216_36131023_1	chr3	+	840	7	ISM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	88	15979	0	854	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGCATTCGAGGCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	36120215	36131023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870
ENSMUSG00000027710.15_36120360_36134404_1	chr3	+	827	9	ISM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	232	12598	144	4235	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCAGTGCTGTGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	36120359	36134404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369
ENSMUSG00000027710.15_36123875_36139691_1	chr3	+	1112	11	ISM	ENSMUSG00000027710.15	ENST00000681367.1	1856	17	18	5392	18	-5392	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCCCTGCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	36123874	36139691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562
ENSMUSG00000027710.15_36123875_36145083_1	chr3	+	1087	11	FSM	ENSMUSG00000027710.15	ENST00000681552.1	1105	11	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACCATGTACCTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	36123874	36145083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36144979
ENSMUSG00000027710.15_36127654_36141948_1	chr3	+	1116	11	ISM	ENSMUSG00000027710.15	ENST00000681367.1	1856	17	3797	3135	3797	-3135	internal_fragment	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGCTGCTTTCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	36127653	36141948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868
ENSMUSG00000027710.15_36128498_36142763_1	chr3	+	1140	11	ISM	ENSMUSG00000027710.15	ENST00000681367.1	1856	17	4641	2320	4641	-2320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATGCCCAGCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	36128497	36142763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636
ENSMUSG00000027710.15_36129390_36143041_1	chr3	+	1112	11	ISM	ENSMUSG00000027710.15	ENST00000681367.1	1856	17	5533	2042	5533	-2042	internal_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGGTCTGGCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	36129389	36143041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963
ENSMUSG00000027710.15_36130159_36143537_1	chr3	+	1032	11	ISM	ENSMUSG00000027710.15	ENST00000681367.1	1856	17	6302	1546	6302	-1546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCATGACTGCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	36130158	36143537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480
ENSMUSG00000027710.15_36130918_36144182_1	chr3	+	1099	11	ISM	ENSMUSG00000027710.15	ENST00000681367.1	1856	17	7061	901	7061	-901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTCAGAGTTCTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	36130917	36144182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143673_36144158
ENSMUSG00000027710.15_36130918_36144231_1	chr3	+	1148	11	ISM	ENSMUSG00000027710.15	ENST00000681367.1	1856	17	7061	852	7061	-852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTGGCCAACATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	36130917	36144231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143673_36144158
ENSMUSG00000027710.15_36134370_36144303_1	chr3	+	883	9	ISM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	14242	2699	10513	-780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGAGAGGGCTCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	36134369	36144303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230
ENSMUSG00000027710.15_36134370_36145083_1	chr3	+	1122	10	ISM	ENSMUSG00000027710.15	ENST00000681367.1	1856	17	10513	0	10513	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACCATGTACCTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	36134369	36145083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143673_36144158_36144304_36144979
ENSMUSG00000027710.15_36135997_36145022_1	chr3	+	813	9	ISM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	15869	1980	12140	-61	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATCCTTGAGAAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	36135996	36145022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
ENSMUSG00000027710.15_36139561_36145284_1	chr3	+	923	7	ISM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	19433	1718	15704	201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGAAAGAAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	36139560	36145284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
ENSMUSG00000027710.15_36141933_36145419_1	chr3	+	863	6	ISM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	21805	1583	18076	336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAACCATGTATAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	36141932	36145419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
ENSMUSG00000027710.15_36143008_36145521_1	chr3	+	778	4	ISM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	22880	1481	19151	438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCCACCTAGACTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	36143007	36145521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36143042_36143480_36143610_36144230_36144304_36144979
ENSMUSG00000027710.15_36143524_36145665_1	chr3	+	845	3	ISM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	23396	1337	19667	582	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTTTACTAGAATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	36143523	36145665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36143610_36144230_36144304_36144979
ENSMUSG00000027710.15_36143586_36145705_1	chr3	+	823	3	ISM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	23458	1297	19729	622	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATTTAATGATGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	36143585	36145705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36143610_36144230_36144304_36144979
ENSMUSG00000027712.14_36503072_36529837_2	chr3	-	1525	13	FSM	ENSMUSG00000027712.14	ENSMUST00000029266.14	1731	13	206	0	206	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTAGGTTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	36529837	36503071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_36503556_36504460_36504584_36504786_36504846_36506335_36506432_36507619_36507714_36511141_36511199_36511607_36511688_36514591_36514683_36516029_36516144_36518116_36518212_36519399_36519485_36529578_36529610_36529721
ENSMUSG00000027712.14_36503072_36529899_1	chr3	-	1587	13	FSM	ENSMUSG00000027712.14	ENSMUST00000029266.14	1731	13	144	0	144	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTAGGTTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	36529899	36503071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_36503556_36504460_36504584_36504786_36504846_36506335_36506432_36507619_36507714_36511141_36511199_36511607_36511688_36514591_36514683_36516029_36516144_36518116_36518212_36519399_36519485_36529578_36529610_36529721
ENSMUSG00000027714.12_36606800_36616206_1	chr3	+	902	9	ISM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	45	3670	45	-3670	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAGAATCACAGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	36606799	36616206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36606901_36607183_36607279_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166
ENSMUSG00000027714.12_36607949_36617240_1	chr3	+	838	8	ISM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	1194	2636	1194	-2636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTCCTGGAACTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	36607948	36617240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221
ENSMUSG00000027714.12_36608012_36617287_1	chr3	+	822	8	ISM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	1257	2589	1257	-2589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGACCTTGAAGATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	36608011	36617287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221
ENSMUSG00000027714.12_36608047_36617395_1	chr3	+	895	8	ISM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	1292	2481	1292	-2481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTCAAGGTAGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	36608046	36617395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221
ENSMUSG00000027714.12_36608247_36619380_1	chr3	+	834	8	ISM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	1492	496	1492	-496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATCAGATAGTGAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	36608246	36619380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366
ENSMUSG00000027714.12_36608860_36619629_1	chr3	+	833	8	ISM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	2105	247	2105	-247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGAAGAAGAGAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	36608859	36619629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366_36619446_36619577
ENSMUSG00000027714.12_36609702_36619794_1	chr3	+	862	7	ISM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	2947	82	2947	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTGCACAAGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	36609701	36619794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366_36619446_36619577
ENSMUSG00000027715.10_36619344_36621935_1	chr3	-	1399	4	ISM	ENSMUSG00000027715.10	ENSMUST00000196316.2	2001	8	3765	-783	3765	-330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTACTGCTTAAGCACATC	NA	NA	NA	NA	NA	NA	NA	NA	36621935	36619343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872
ENSMUSG00000027715.10_36619400_36621981_1	chr3	-	1389	4	ISM	ENSMUSG00000027715.10	ENSMUST00000196316.2	2001	8	3719	-727	3719	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTCACTATCTGATAGC	NA	NA	NA	NA	NA	NA	NA	NA	36621981	36619399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872
ENSMUSG00000027715.10_36619443_36622043_1	chr3	-	1408	4	ISM	ENSMUSG00000027715.10	ENSMUST00000196316.2	2001	8	3657	-684	3657	-429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTTTGGGTTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	36622043	36619442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872
ENSMUSG00000027715.10_36619784_36623238_1	chr3	-	1438	6	ISM	ENSMUSG00000027715.10	ENSMUST00000196316.2	2001	8	2462	-343	2462	343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTTATTCAAAGCATAA	NA	NA	NA	NA	NA	NA	NA	NA	36623238	36619783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736_36622961_36623128
ENSMUSG00000027715.10_36620127_36625902_1	chr3	-	1455	8	FSM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	397	1113	-202	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGTCAAAGTTAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	36625902	36620126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ENSMUSG00000027715.10_36620230_36625973_1	chr3	-	1423	8	FSM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	326	1216	-273	-103	multi-exon	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATATCTTTTGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	36625973	36620229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ENSMUSG00000027715.10_36620293_36626076_1	chr3	-	1463	8	FSM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	223	1279	223	-166	multi-exon	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATGTAGATGGTATAGC	NA	NA	NA	NA	NA	NA	NA	NA	36626076	36620292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ENSMUSG00000027715.10_36621149_36626299_1	chr3	-	1413	6	ISM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	0	2135	0	-1022	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTATTACCAGTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	36626299	36621148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ENSMUSG00000027722.15_37474336_37490873_1	chr3	+	1568	8	ISM	ENSMUSG00000027722.15	ENSMUST00000029277.13	2890	16	-111	142372	-111	-142372	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAGCTTCACTCTTAACA	NA	NA	NA	NA	NA	NA	NA	NA	37474335	37490873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_37474650_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790
ENSMUSG00000027722.15_37478711_37502631_1	chr3	+	1578	9	ISM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	4250	130614	4250	-130614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTCTAAATGATTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	37478710	37502631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556
ENSMUSG00000027722.15_37480329_37505861_1	chr3	+	1563	9	ISM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	5868	127384	5868	-127384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACATCCTAAGTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	37480328	37505861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791
ENSMUSG00000027722.15_37485813_37510957_1	chr3	+	1580	8	ISM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	11352	122288	11352	-122288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAGAGCAGTTAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	37485812	37510957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923
ENSMUSG00000027722.15_37486032_37518740_1	chr3	+	1521	10	ISM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	11571	114505	11571	-114505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGATTGAACAGCTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37486031	37518740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680
ENSMUSG00000027722.15_37486349_37633028_1	chr3	+	1564	12	ISM	ENSMUSG00000027722.15	ENSMUST00000029277.13	2890	16	11902	217	11888	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCTTTTATGAAGATTACC	NA	NA	NA	NA	NA	NA	NA	NA	37486348	37633028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ENSMUSG00000027742.14_52889296_52909758_1	chr3	-	2226	10	ISM	ENSMUSG00000027742.14	ENST00000455146.8	1823	18	13277	-1168	13277	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCATGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	52909758	52889295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666
ENSMUSG00000027742.14_52889543_52916927_1	chr3	-	2307	14	ISM	ENSMUSG00000027742.14	ENSMUST00000036665.10	3182	19	7731	247	6108	-247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTAGTATTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	52916927	52889542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893
ENSMUSG00000027742.14_52889764_52918016_1	chr3	-	2155	15	ISM	ENSMUSG00000027742.14	ENSMUST00000036665.10	3182	19	6642	468	5019	-468	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTGTGGTATCAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	52918016	52889763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996
ENSMUSG00000027742.14_52889794_52918090_1	chr3	-	2199	15	ISM	ENSMUSG00000027742.14	ENSMUST00000036665.10	3182	19	6568	498	4945	-498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCACTCAGAGCAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	52918090	52889793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996
ENSMUSG00000027742.14_52890037_52922944_1	chr3	-	2160	18	ISM	ENSMUSG00000027742.14	ENSMUST00000036665.10	3182	19	1714	741	91	427	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGGTGTTGATGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	52922944	52890036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922889
ENSMUSG00000027742.14_52890200_52924516_1	chr3	-	2136	19	FSM	ENSMUSG00000027742.14	ENSMUST00000036665.10	3182	19	142	904	121	264	multi-exon	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAAGTCAGCTGGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	52924516	52890199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922889_52923034_52924466
ENSMUSG00000027742.14_52890250_52924631_1	chr3	-	2201	19	FSM	ENSMUSG00000027742.14	ENSMUST00000036665.10	3182	19	27	954	6	214	multi-exon	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGCATAGCAGTGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	52924631	52890249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922889_52923034_52924466
ENSMUSG00000027742.14_52890293_52924641_1	chr3	-	2168	19	FSM	ENSMUSG00000027742.14	ENSMUST00000036665.10	3182	19	17	997	-4	171	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAATCTGTAGGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	52924641	52890292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922889_52923034_52924466
ENSMUSG00000027742.14_52900938_52916932_1	chr3	-	754	9	ISM	ENSMUSG00000027742.14	ENST00000455146.8	1823	18	6103	10474	6103	-8790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGCGGGATATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	52916932	52900937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914756_52916469_52916545_52916893
ENSMUSG00000027742.14_52903486_52918065_1	chr3	-	755	9	ISM	ENSMUSG00000027742.14	ENST00000455146.8	1823	18	4970	13022	4970	-11338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAAAAATCTTCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	52918065	52903485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914756_52916469_52916545_52916893_52916977_52917996
ENSMUSG00000027742.14_52905678_52920387_1	chr3	-	798	9	ISM	ENSMUSG00000027742.14	ENST00000455146.8	1823	18	2648	15214	2648	-13530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACAGTAACAAAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	52920387	52905677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914756_52916469_52916545_52916893_52916977_52917996_52918109_52920326
ENSMUSG00000027742.14_52907900_52921309_1	chr3	-	780	9	ISM	ENSMUSG00000027742.14	ENST00000455146.8	1823	18	1726	17436	1726	-15752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTCTGGTTTCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	52921309	52907899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_52907967_52909666_52909759_52909833_52909963_52914666_52914756_52916469_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235
ENSMUSG00000027746.14_53764487_53771251_1	chr3	-	1200	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	0	3690	0	1745	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAACAGGAGGCTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	53771251	53764486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
ENSMUSG00000027748.12_54102128_54225452_1	chr3	+	2795	10	FSM	ENSMUSG00000027748.12	ENST00000625583.2	2996	10	24	177	24	-177	multi-exon	FALSE	canonical	NA	NA	NA	NA	1519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGACACCGTCCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	54102127	54225452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_54102482_54129613_54130133_54173504_54173842_54187283_54187424_54198451_54198766_54206489_54206686_54209520_54209735_54223037_54223080_54223186_54223277_54224863
ENSMUSG00000027748.12_54102363_54225629_1	chr3	+	2732	10	NNC	ENSMUSG00000027748.12	novel	2996	10	NA	NA	259	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCAAAATGTTTGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	54102362	54225629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_54102482_54129613_54130133_54173504_54173842_54187283_54187424_54198456_54198766_54206489_54206686_54209520_54209735_54223037_54223080_54223186_54223277_54224863
ENSMUSG00000027748.12_54102363_54225629_2	chr3	+	2734	10	NNC	ENSMUSG00000027748.12	novel	2996	10	NA	NA	259	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCAAAATGTTTGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	54102362	54225629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_54102482_54129613_54130133_54173504_54173842_54187283_54187424_54198451_54198766_54206489_54206686_54209520_54209735_54223037_54223080_54223189_54223277_54224863
ENSMUSG00000027748.12_54102363_54225629_3	chr3	+	2737	10	FSM	ENSMUSG00000027748.12	ENST00000625583.2	2996	10	259	0	259	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCAAAATGTTTGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	54102362	54225629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_54102482_54129613_54130133_54173504_54173842_54187283_54187424_54198451_54198766_54206489_54206686_54209520_54209735_54223037_54223080_54223186_54223277_54224863
ENSMUSG00000027748.12_54102363_54225629_4	chr3	+	2736	10	NNC	ENSMUSG00000027748.12	novel	2996	10	NA	NA	259	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	1028	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCAAAATGTTTGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	54102362	54225629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_54102482_54129613_54130133_54173504_54173842_54187283_54187424_54198451_54198766_54206489_54206686_54209520_54209735_54223038_54223080_54223186_54223277_54224863
ENSMUSG00000027748.12_54102363_54225629_5	chr3	+	2731	10	NNC	ENSMUSG00000027748.12	novel	2996	10	NA	NA	259	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCAAAATGTTTGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	54102362	54225629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_54102482_54129613_54130133_54173504_54173842_54187283_54187424_54198451_54198766_54206489_54206686_54209520_54209735_54223037_54223080_54223186_54223271_54224863
ENSMUSG00000027748.12_54102363_54225629_6	chr3	+	2730	10	NNC	ENSMUSG00000027748.12	novel	2996	10	NA	NA	259	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	879	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCAAAATGTTTGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	54102362	54225629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_54102482_54129613_54130133_54173504_54173835_54187283_54187424_54198451_54198766_54206489_54206686_54209520_54209735_54223037_54223080_54223186_54223277_54224863
ENSMUSG00000027750.17_54277669_54284194_1	chr3	+	1088	8	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	7622	14214	7622	-13679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATATCCTGAAGACCACA	NA	NA	NA	NA	NA	NA	NA	NA	54277668	54284194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_54277766_54278251_54278394_54279424_54279638_54280190_54280326_54281125_54281275_54282438_54282576_54283457_54283589_54284110
ENSMUSG00000027750.17_54278252_54284434_1	chr3	+	1141	8	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	8205	13974	8205	-13439	internal_fragment	TRUE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGTAAAGATTAAACACG	NA	NA	NA	NA	NA	NA	NA	NA	54278251	54284434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_54278394_54279424_54279638_54280190_54280326_54281125_54281275_54282438_54282576_54283457_54283589_54284110_54284242_54284331
ENSMUSG00000027750.17_54279563_54292648_1	chr3	+	1085	11	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	9516	5760	9516	-5225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTTCCACAGGAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	54279562	54292648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_54279638_54280190_54280326_54281125_54281275_54282438_54282576_54283457_54283589_54284110_54284242_54284331_54284435_54284585_54284654_54284981_54285028_54291904_54291995_54292628
ENSMUSG00000027750.17_54280190_54293175_1	chr3	+	1153	11	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	10143	5233	10143	-4698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAGTAAACATCGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	54280189	54293175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_54280326_54281125_54281275_54282438_54282576_54283457_54283589_54284110_54284242_54284331_54284435_54284585_54284654_54284981_54285028_54291904_54291995_54292628_54292707_54293091
ENSMUSG00000027750.17_54281134_54297814_1	chr3	+	1183	12	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	11087	594	11087	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAATGACAACCAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	54281133	54297814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_54281275_54282438_54282576_54283457_54283589_54284110_54284242_54284331_54284435_54284585_54284654_54284981_54285028_54291904_54291995_54292628_54292707_54293091_54293176_54296759_54296802_54297682
ENSMUSG00000027750.17_54281197_54297814_1	chr3	+	1120	12	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	11150	594	11150	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAATGACAACCAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	54281196	54297814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_54281275_54282438_54282576_54283457_54283589_54284110_54284242_54284331_54284435_54284585_54284654_54284981_54285028_54291904_54291995_54292628_54292707_54293091_54293176_54296759_54296802_54297682
ENSMUSG00000027750.17_54281260_54297823_1	chr3	+	1066	12	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	11213	585	11213	-50	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCAACAGAAGCCAATCT	NA	NA	NA	NA	NA	NA	NA	NA	54281259	54297823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_54281275_54282438_54282576_54283457_54283589_54284110_54284242_54284331_54284435_54284585_54284654_54284981_54285028_54291904_54291995_54292628_54292707_54293091_54293176_54296759_54296802_54297682
ENSMUSG00000027750.17_54283454_54298003_1	chr3	+	1098	10	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	13407	405	13407	130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATCATTGTGACTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	54283453	54298003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_54283589_54284110_54284242_54284331_54284435_54284585_54284654_54284981_54285028_54291904_54291995_54292628_54292707_54293091_54293176_54296759_54296802_54297682
ENSMUSG00000027750.17_54284161_54298140_1	chr3	+	1050	9	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	14114	268	14114	267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATACAACATGCAAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	54284160	54298140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_54284242_54284331_54284435_54284585_54284654_54284981_54285028_54291904_54291995_54292628_54292707_54293091_54293176_54296759_54296802_54297682
ENSMUSG00000027750.17_54284351_54298269_1	chr3	+	1079	8	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	14304	139	14304	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTTGCAATACAAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	54284350	54298269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_54284435_54284585_54284654_54284981_54285028_54291904_54291995_54292628_54292707_54293091_54293176_54296759_54296802_54297682
ENSMUSG00000027750.17_54284416_54298328_1	chr3	+	1073	8	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	14369	80	14369	-80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAATTACTGCAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	54284415	54298328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_54284435_54284585_54284654_54284981_54285028_54291904_54291995_54292628_54292707_54293091_54293176_54296759_54296802_54297682
ENSMUSG00000027750.17_54284584_54298455_1	chr3	+	1183	7	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	14537	-47	14537	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGTGTTCCTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	54284583	54298455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_54284654_54284981_54285028_54291904_54291995_54292628_54292707_54293091_54293176_54296759_54296802_54297682
ENSMUSG00000027750.17_54284606_54297702_1	chr3	+	318	6	ISM	ENSMUSG00000027750.17	ENST00000541481.5	2867	19	14559	753	14559	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCCGTTCTCAGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	54284605	54297702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_54284654_54284981_54285028_54292628_54292707_54293091_54293176_54296759_54296802_54297682
ENSMUSG00000027751.14_54600534_54616529_1	chr3	+	963	11	ISM	ENSMUSG00000027751.14	ENSMUST00000197502.5	2751	27	306	19528	8	-7729	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACTTGATTTCTTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	54600533	54616529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451
ENSMUSG00000027751.14_54616519_54625716_1	chr3	+	937	11	ISM	ENSMUSG00000027751.14	ENSMUST00000197502.5	2751	27	16291	10341	15993	1458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTGCAGGAAAAAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	54616518	54625716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654
ENSMUSG00000027751.14_54622616_54635819_1	chr3	+	911	9	ISM	ENSMUSG00000027751.14	ENSMUST00000197502.5	2751	27	22388	238	22090	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTACATCGTCACCGG	NA	NA	NA	NA	NA	NA	NA	NA	54622615	54635819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ENSMUSG00000027751.14_54623078_54636057_1	chr3	+	964	8	ISM	ENSMUSG00000027751.14	ENSMUST00000197502.5	2751	27	22850	0	22552	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTACATACCAATCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	54623077	54636057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ENSMUSG00000027752.16_54636247_54641588_1	chr3	-	728	8	ISM	ENSMUSG00000027752.16	ENST00000406079.1	742	9	145	-2	145	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCAAGCTACTGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	54641588	54636246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639664_54641059_54641153_54641523
ENSMUSG00000027763.14_60437052_60511197_1	chr3	+	428	3	ISM	ENSMUSG00000027763.14	ENST00000485509.5	1019	7	0	21404	0	-21404	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCCAGCAGAGATCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	60437051	60511197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_60437226_60503014_60503186_60511114
ENSMUSG00000027763.14_60437158_60511315_1	chr3	+	440	3	ISM	ENSMUSG00000027763.14	ENST00000485509.5	1019	7	106	21286	106	-21286	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGATAAAGAGTTGAACC	NA	NA	NA	NA	NA	NA	NA	NA	60437157	60511315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_60437226_60503014_60503186_60511114
ENSMUSG00000027763.14_60503062_60520823_1	chr3	+	465	3	ISM	ENSMUSG00000027763.14	ENST00000485509.5	1019	7	66010	11778	66010	-11778	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGGGAAAAGTGCAAATACT	NA	NA	NA	NA	NA	NA	NA	NA	60503061	60520823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_60503186_60511114_60511316_60520683
ENSMUSG00000027763.14_60503062_60532602_1	chr3	+	725	6	ISM	ENSMUSG00000027763.14	ENST00000465907.6	945	7	66010	-1	66010	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTCGTCACAAAACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	60503061	60532602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_60503186_60520683_60520942_60523040_60523195_60528843_60528880_60529566_60529662_60532544
ENSMUSG00000027763.14_60511114_60520941_1	chr3	+	460	2	ISM	ENSMUSG00000027763.14	ENST00000485509.5	1019	7	74062	11660	74062	-11660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGAGACAGCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	60511113	60520941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_60511316_60520683
ENSMUSG00000027763.14_60511224_60529622_1	chr3	+	406	3	ISM	ENSMUSG00000027763.14	ENST00000485509.5	1019	7	74172	2979	74172	-2979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTGTTCCCTTCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	60511223	60529622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_60511316_60520683_60520942_60529566
ENSMUSG00000027763.14_60511271_60531430_1	chr3	+	429	4	ISM	ENSMUSG00000027763.14	ENST00000485509.5	1019	7	74219	1171	74219	-1171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATCCTGCCTGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	60511270	60531430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_60511316_60520683_60520942_60529566_60529662_60531399
ENSMUSG00000027763.14_60520755_60532602_1	chr3	+	403	4	ISM	ENSMUSG00000027763.14	ENST00000485509.5	1019	7	83703	-1	83703	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTCGTCACAAAACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	60520754	60532602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_60520942_60529566_60529662_60531399_60531463_60532544
ENSMUSG00000027770.6_62378811_62380422_1	chr3	-	369	4	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	33869	1308	33869	-1308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAATTATTGCTGTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	62380422	62378810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62378896_62379419_62379541_62380148_62380240_62380350
ENSMUSG00000027770.6_62379500_62384958_1	chr3	-	348	5	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	29333	1997	29333	-1997	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTAAGTCTGTCAACGTG	NA	NA	NA	NA	NA	NA	NA	NA	62384958	62379499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384926
ENSMUSG00000027770.6_62380435_62386816_1	chr3	-	350	4	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	27475	2932	27475	-2932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGACAGTTTGCTGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	62386816	62380434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62380451_62382690_62382775_62384926_62385101_62386740
ENSMUSG00000027770.6_62382735_62388240_1	chr3	-	331	4	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	26051	5232	26051	-5232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTACTGCTGGGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	62388240	62382734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62382775_62384926_62385101_62386740_62386840_62388222
ENSMUSG00000027770.6_62385057_62391618_1	chr3	-	328	4	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	22673	7554	22673	-7554	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCCGACTGCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	62391618	62385056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62385101_62386740_62386840_62388222_62388341_62391551
ENSMUSG00000027770.6_62388327_62395587_1	chr3	-	316	5	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	18704	10824	18704	-10824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTTATCATCTGTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	62395587	62388326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550
ENSMUSG00000027770.6_62392412_62396398_1	chr3	-	356	5	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	17893	14909	17893	-14909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAGTAATTGCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	62396398	62392411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318
ENSMUSG00000027770.6_62396023_62401213_1	chr3	-	332	4	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	13078	18520	13078	-18520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGATCTGAATTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	62401213	62396022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62396069_62396318_62396460_62399771_62399854_62401150
ENSMUSG00000027770.6_62396387_62401791_1	chr3	-	349	4	ISM	ENSMUSG00000027770.6	ENSMUST00000029336.6	5620	25	12634	20953	12500	-18884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAGAAAAAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	62401791	62396386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62396460_62399771_62399854_62401150_62401318_62401764
ENSMUSG00000027770.6_62401168_62404167_1	chr3	-	323	4	ISM	ENSMUSG00000027770.6	ENSMUST00000029336.6	5620	25	10258	25734	10124	-23665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCAGAATATTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	62404167	62401167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62401318_62401764_62401840_62402878_62402959_62404149
ENSMUSG00000027770.6_62401222_62404217_1	chr3	-	319	4	ISM	ENSMUSG00000027770.6	ENSMUST00000029336.6	5620	25	10208	25788	10074	-23719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCGATCTGATCTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	62404217	62401221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62401318_62401764_62401840_62402878_62402959_62404149
ENSMUSG00000027770.6_62401761_62405549_1	chr3	-	369	4	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	8742	24258	8742	-24258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTTCAGTGAAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	62405549	62401760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62401840_62402878_62402959_62404149_62404321_62405510
ENSMUSG00000027770.6_62402899_62408333_1	chr3	-	349	4	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	5958	25396	5958	-25396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGATTCGTCTTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	62408333	62402898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62402959_62404149_62404321_62405510_62405550_62408254
ENSMUSG00000027770.6_62404231_62408435_1	chr3	-	310	3	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	5856	26728	5856	-26728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGATAACTACATCGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	62408435	62404230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62404321_62405510_62405550_62408254
ENSMUSG00000027770.6_62404279_62408489_1	chr3	-	316	3	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	5802	26776	5802	-26776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTGAAACTGGTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	62408489	62404278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62404321_62405510_62405550_62408254
ENSMUSG00000027770.6_62405510_62409438_1	chr3	-	319	3	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	4853	28007	4853	-28007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTCTTTCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	62409438	62405509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62405550_62408254_62408490_62409394
ENSMUSG00000027770.6_62408332_62414172_1	chr3	-	317	3	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	119	30829	119	-30829	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACCTAAGCTTAGATCAA	NA	NA	NA	NA	NA	NA	NA	NA	62414172	62408331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62408490_62409394_62409520_62414138
ENSMUSG00000027770.6_62408387_62414232_1	chr3	-	322	3	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	59	30884	59	-30884	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGACAAATCATATATTGA	NA	NA	NA	NA	NA	NA	NA	NA	62414232	62408386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_62408490_62409394_62409520_62414138
ENSMUSG00000027774.17_67337429_67382441_1	chr3	+	2657	18	FSM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	0	1421	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGCTTAAAATATATATAA	NA	NA	NA	NA	NA	NA	NA	NA	67337428	67382441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ENSMUSG00000027774.17_67338980_67382441_1	chr3	+	2493	17	NNC	ENSMUSG00000027774.17	novel	2485	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGCTTAAAATATATATAA	NA	NA	NA	NA	NA	NA	NA	NA	67338979	67382441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_67339136_67340687_67340821_67342837_67343043_67345878_67346008_67347394_67347590_67350887_67351043_67352105_67352191_67357011_67357154_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ENSMUSG00000027774.17_67338980_67382593_1	chr3	+	2585	17	ISM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	1551	1269	0	152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTACGTCTGTGGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	67338979	67382593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ENSMUSG00000027774.17_67339089_67382696_1	chr3	+	2579	17	ISM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	1660	1166	109	255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGTTGCTGAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	67339088	67382696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ENSMUSG00000027774.17_67342950_67382977_1	chr3	+	2568	15	ISM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	5521	885	3970	536	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCATCAAGCCTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	67342949	67382977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ENSMUSG00000027774.17_67347529_67383281_1	chr3	+	2568	13	ISM	ENSMUSG00000027774.17	ENST00000264263.9	2485	17	8549	-840	8549	-581	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCATTAGTGACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	67347528	67383281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ENSMUSG00000027774.17_67350978_67383431_1	chr3	+	2571	12	ISM	ENSMUSG00000027774.17	ENST00000264263.9	2485	17	11998	-990	11998	-431	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCGATAGCCTGGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	67350977	67383431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ENSMUSG00000027774.17_67357047_67383624_1	chr3	+	2579	10	ISM	ENSMUSG00000027774.17	ENST00000264263.9	2485	17	18067	-1183	18067	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCAGTTCCATCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	67357046	67383624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ENSMUSG00000027774.17_67357085_67383690_1	chr3	+	2607	10	ISM	ENSMUSG00000027774.17	ENST00000264263.9	2485	17	18105	-1249	18105	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGTTAAAGACCACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	67357084	67383690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ENSMUSG00000027774.17_67360996_67383862_1	chr3	+	2619	8	ISM	ENSMUSG00000027774.17	ENST00000264263.9	2485	17	22016	-1421	22016	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTCTTCCTGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	67360995	67383862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ENSMUSG00000027775.10_67490074_67503965_1	chr3	+	1033	11	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	0	7605	0	-3420	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACTCTTGGTGGATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	67490073	67503965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926
ENSMUSG00000027775.10_67490197_67504001_1	chr3	+	946	11	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	123	7569	46	-3384	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCCTGTATGCGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	67490196	67504001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926
ENSMUSG00000027775.10_67490255_67504046_1	chr3	+	933	11	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	181	7524	104	-3339	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCCTTCACCTTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	67490254	67504046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926
ENSMUSG00000027775.10_67490278_67503998_1	chr3	+	745	10	ISM	ENSMUSG00000027775.10	ENST00000392813.8	1168	12	127	3387	127	-3387	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGGTCCTGTATGCGG	NA	NA	NA	NA	NA	NA	NA	NA	67490277	67503998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67490311_67491980_67492030_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926
ENSMUSG00000027775.10_67491980_67505458_1	chr3	+	1009	11	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	1906	6112	3	-1927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACTGCATTTTTACC	NA	NA	NA	NA	NA	NA	NA	NA	67491979	67505458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360
ENSMUSG00000027775.10_67491980_67507334_1	chr3	+	1081	12	FSM	ENSMUSG00000027775.10	ENST00000576210.1	1139	12	3	55	3	-51	multi-exon	FALSE	canonical	NA	NA	NA	NA	1908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGAAGGGATACTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	67491979	67507334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501741_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272
ENSMUSG00000027775.10_67492930_67507334_1	chr3	+	1026	11	NNC	ENSMUSG00000027775.10	novel	1139	12	NA	NA	953	-51	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	865	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGAAGGGATACTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	67492929	67507334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_67493044_67494633_67494677_67495250_67495313_67497163_67497273_67499902_67500006_67501631_67501741_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272
ENSMUSG00000027775.10_67492930_67507334_2	chr3	+	1022	11	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	2856	4236	953	-51	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGAAGGGATACTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	67492929	67507334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272
ENSMUSG00000027775.10_67492930_67507334_3	chr3	+	1032	11	ISM	ENSMUSG00000027775.10	ENST00000576210.1	1139	12	953	55	953	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGAAGGGATACTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	67492929	67507334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501741_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272
ENSMUSG00000027775.10_67492930_67507389_1	chr3	+	1086	11	NNC	ENSMUSG00000027775.10	novel	1139	12	NA	NA	953	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCCCCGTGGCAGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	67492929	67507389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501741_67502100_67502213_67503501_67503559_67503926_67504084_67505361_67505459_67507272
ENSMUSG00000027775.10_67495298_67508674_1	chr3	+	937	11	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	5224	2896	3321	1285	internal_fragment	TRUE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAACAAAGGGAACGGAT	NA	NA	NA	NA	NA	NA	NA	NA	67495297	67508674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654
ENSMUSG00000027775.10_67497218_67510087_1	chr3	+	960	11	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	7144	1483	5241	-1483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAACGTCATGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	67497217	67510087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ENSMUSG00000027775.10_67499992_67510236_1	chr3	+	965	10	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	9918	1334	8015	-1334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACGGAATCTGGAACATTC	NA	NA	NA	NA	NA	NA	NA	NA	67499991	67510236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ENSMUSG00000027775.10_67503961_67510548_1	chr3	+	961	6	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	13887	1022	11984	-1022	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAATAAAAGTGTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	67503960	67510548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ENSMUSG00000027775.10_67505412_67510788_1	chr3	+	1027	5	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	15338	782	13435	-782	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCTTTGGCACCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	67505411	67510788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ENSMUSG00000027776.13_68597977_68605712_1	chr3	+	1135	8	FSM	ENSMUSG00000027776.13	ENSMUST00000029345.12	1303	8	0	168	0	-164	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCTTATTTAAAAATATT	NA	NA	NA	NA	NA	NA	NA	NA	68597976	68605712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_68598075_68598823_68598900_68599355_68599490_68601493_68601608_68602522_68602565_68602637_68602680_68602769_68602914_68605227
ENSMUSG00000027776.13_68599356_68605881_1	chr3	+	1130	6	ISM	ENSMUSG00000027776.13	ENSMUST00000107816.4	1268	7	599	-5	599	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGTTCTTGGAGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	68599355	68605881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_68599490_68601493_68601608_68602522_68602565_68602637_68602680_68602769_68602914_68605227
ENSMUSG00000027777.16_68401541_68523890_1	chr3	+	1044	4	ISM	ENSMUSG00000027777.16	ENST00000460298.3	1523	7	10	4562	0	-4562	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCCACGTGGCCACCG	NA	NA	NA	NA	NA	NA	NA	NA	68401540	68523890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_68401703_68401906_68402552_68503482_68503602_68523772
ENSMUSG00000027777.16_68401682_68524988_1	chr3	+	948	5	ISM	ENSMUSG00000027777.16	ENST00000460298.3	1523	7	151	3464	141	-3464	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTGAATCCCTGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	68401681	68524988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_68401703_68401906_68402552_68503482_68503602_68523772_68523891_68524943
ENSMUSG00000027777.16_68402025_68523890_1	chr3	+	803	3	ISM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	484	9906	118	-4562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCCACGTGGCCACCG	NA	NA	NA	NA	NA	NA	NA	NA	68402024	68523890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_68402591_68503482_68503602_68523772
ENSMUSG00000027777.16_68402025_68525141_1	chr3	+	962	4	ISM	ENSMUSG00000027777.16	ENST00000460298.3	1523	7	494	3311	118	-3311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCAGCGGAGGCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	68402024	68525141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_68402552_68503482_68503602_68523772_68523891_68524943
ENSMUSG00000027777.16_68402162_68526054_1	chr3	+	951	5	ISM	ENSMUSG00000027777.16	ENST00000460298.3	1523	7	631	2398	255	-2398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGGGGATCTGCTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	68402161	68526054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_68402552_68503482_68503602_68523772_68523891_68524943_68525142_68525928
ENSMUSG00000027777.16_68402263_68533814_1	chr3	+	1656	7	ISM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	722	-18	356	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAGCACTGGCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	68402262	68533814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ENSMUSG00000027777.16_68402321_68528437_1	chr3	+	922	6	ISM	ENSMUSG00000027777.16	ENST00000460298.3	1523	7	790	15	414	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGTAGTCTGAACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	68402320	68528437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_68402552_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305
ENSMUSG00000027777.16_68402379_68533191_1	chr3	+	878	7	FSM	ENSMUSG00000027777.16	ENST00000412423.8	1942	7	472	592	472	-592	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAGCCATCCACCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	68402378	68533191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_68402552_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ENSMUSG00000027777.16_68402423_68533249_1	chr3	+	892	7	FSM	ENSMUSG00000027777.16	ENST00000412423.8	1942	7	516	534	516	-534	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTGTTGCTAAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	68402422	68533249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_68402552_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ENSMUSG00000027777.16_68402473_68533300_1	chr3	+	893	7	FSM	ENSMUSG00000027777.16	ENST00000412423.8	1942	7	566	483	566	-483	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTCCGAGCTTACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	68402472	68533300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_68402552_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ENSMUSG00000027777.16_68523840_68533477_1	chr3	+	805	5	ISM	ENSMUSG00000027777.16	ENSMUST00000182997.3	1557	7	32328	320	32328	-306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTAGTTTTGACTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	68523839	68533477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ENSMUSG00000027777.16_68525034_68533638_1	chr3	+	825	4	ISM	ENSMUSG00000027777.16	ENSMUST00000182997.3	1557	7	33522	159	33522	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTACGTATATTTTAATCA	NA	NA	NA	NA	NA	NA	NA	NA	68525033	68533638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_68525142_68525928_68526053_68528305_68528400_68533139
ENSMUSG00000027782.11_68984147_68994809_1	chr3	-	520	6	ISM	ENSMUSG00000027782.11	ENST00000402742.1	1453	15	13956	2720	13956	-2720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATGAGGACATCTACA	NA	NA	NA	NA	NA	NA	NA	NA	68994809	68984146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789
ENSMUSG00000027782.11_68986842_68997153_1	chr3	-	514	6	ISM	ENSMUSG00000027782.11	ENST00000402742.1	1453	15	11612	5415	11612	-5415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTTTTGCAATTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	68997153	68986841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108
ENSMUSG00000027782.11_68988507_68997307_1	chr3	-	535	6	ISM	ENSMUSG00000027782.11	ENST00000402742.1	1453	15	11458	7080	11458	-7080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAAGACCAAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	68997307	68988506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240
ENSMUSG00000027782.11_68993089_69002017_1	chr3	-	526	6	ISM	ENSMUSG00000027782.11	ENSMUST00000194558.6	3726	17	32408	13535	6748	-11662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAACTGTGATGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	69002017	68993088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985
ENSMUSG00000027782.11_68997109_69008437_1	chr3	-	537	6	ISM	ENSMUSG00000027782.11	ENST00000678765.1	3393	16	25820	17522	328	-15682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAAATTCTTCTCGTA	NA	NA	NA	NA	NA	NA	NA	NA	69008437	68997108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384
ENSMUSG00000027782.11_68997300_69008721_1	chr3	-	511	7	ISM	ENSMUSG00000027782.11	ENST00000678765.1	3393	16	25536	17713	44	-15873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGTCAATTTATGTCGC	NA	NA	NA	NA	NA	NA	NA	NA	69008721	68997299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673
ENSMUSG00000027787.15_69631569_69638988_1	chr3	+	554	5	ISM	ENSMUSG00000027787.15	ENSMUST00000029358.15	9135	16	2251	24718	2251	-24718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGTTCAAATTTAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	69631568	69638988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897
ENSMUSG00000027787.15_69648931_69656188_1	chr3	+	505	6	ISM	ENSMUSG00000027787.15	ENSMUST00000029358.15	9135	16	19613	7518	19613	-7518	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAAGATGCCACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	69648930	69656188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
ENSMUSG00000027787.15_69654135_69656502_1	chr3	+	503	3	ISM	ENSMUSG00000027787.15	ENSMUST00000029358.15	9135	16	24817	7204	24817	-7204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGTAGTATTTTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	69654134	69656502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_69654169_69655630_69655702_69656104
ENSMUSG00000027797.16_55370420_55374087_1	chr3	+	191	2	ISM	ENSMUSG00000027797.16	ENSMUST00000199585.5	5196	3	1271	4652	1027	-4650	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGTTTCCCATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	55370419	55374087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_55370517_55373993
ENSMUSG00000027799.13_55965371_55998465_2	chr3	-	607	4	NNC	ENSMUSG00000027799.13	novel	686	4	NA	NA	76	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	416	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTTCTTTGCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	55998465	55965370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_55965505_55966053_55966250_55992668_55992790_55998309
ENSMUSG00000027799.13_55965371_55998533_1	chr3	-	681	4	NNC	ENSMUSG00000027799.13	novel	10986	58	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTTCTTTGCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	55998533	55965370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_55965505_55966053_55966250_55992662_55992790_55998309
ENSMUSG00000027800.15_57194905_57197209_1	chr3	-	387	2	ISM	ENSMUSG00000027800.15	ENSMUST00000171384.8	2855	5	5101	1873	5101	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTATTGTGCATATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	57197209	57194904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57195192_57197109
ENSMUSG00000027800.15_57194905_57202310_1	chr3	-	982	5	FSM	ENSMUSG00000027800.15	ENSMUST00000171384.8	2855	5	0	1873	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTATTGTGCATATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	57202310	57194904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_57195192_57197109_57197291_57200200_57200347_57200433_57200524_57202032
ENSMUSG00000027800.15_57195148_57200346_1	chr3	-	371	3	ISM	ENSMUSG00000027800.15	ENSMUST00000171384.8	2855	5	1964	2116	1964	-243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTATTTCACTGTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	57200346	57195147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57195192_57197109_57197291_57200200
ENSMUSG00000027800.15_57195148_57202546_1	chr3	-	975	5	FSM	ENSMUSG00000027800.15	ENSMUST00000171384.8	2855	5	-236	2116	-236	-243	multi-exon	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTATTTCACTGTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	57202546	57195147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_57195192_57197109_57197291_57200200_57200347_57200433_57200524_57202032
ENSMUSG00000027800.15_57197137_57209254_1	chr3	-	967	5	ISM	ENSMUSG00000027800.15	ENSMUST00000029376.13	1436	6	155	2232	103	-2232	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTGCTGCTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	57209254	57197136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57197291_57200200_57200347_57200433_57200524_57202032_57202504_57209148
ENSMUSG00000027800.15_57197214_57209357_1	chr3	-	993	5	ISM	ENSMUSG00000027800.15	ENSMUST00000029376.13	1436	6	52	2309	0	-2309	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCCTCTTGGCTTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	57209357	57197213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57197291_57200200_57200347_57200433_57200524_57202032_57202504_57209148
ENSMUSG00000027800.15_57197242_57202101_1	chr3	-	354	4	ISM	ENSMUSG00000027800.15	ENSMUST00000171384.8	2855	5	209	4210	209	-2337	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGAGTGGCATGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	57202101	57197241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57197291_57200200_57200347_57200433_57200524_57202032
ENSMUSG00000027800.15_57197273_57209371_1	chr3	-	948	5	ISM	ENSMUSG00000027800.15	ENSMUST00000029376.13	1436	6	38	2368	-14	-2368	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTCCAAGTGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	57209371	57197272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57197291_57200200_57200347_57200433_57200524_57202032_57202504_57209148
ENSMUSG00000027800.15_57202189_57208973_1	chr3	-	346	2	ISM	ENSMUSG00000027800.15	ENSMUST00000196979.5	3372	7	384	9157	384	-7284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACATCGGATACTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	57208973	57202188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57202504_57208942
ENSMUSG00000027800.15_57202241_57209022_1	chr3	-	343	2	ISM	ENSMUSG00000027800.15	ENSMUST00000196979.5	3372	7	335	9209	335	-7336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAAGCCTGCAGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	57209022	57202240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57202504_57208942
ENSMUSG00000027800.15_57202353_57209210_1	chr3	-	328	3	ISM	ENSMUSG00000027800.15	ENSMUST00000196979.5	3372	7	147	9321	147	-7448	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGGCACTATTTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	57209210	57202352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57202504_57208942_57209058_57209148
ENSMUSG00000027800.15_57202453_57209357_1	chr3	-	375	3	ISM	ENSMUSG00000027800.15	ENSMUST00000196979.5	3372	7	0	9421	0	-7548	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGAAGGGCGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	57209357	57202452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57202504_57208942_57209058_57209148
ENSMUSG00000027803.15_57365295_57370895_1	chr3	-	1382	3	ISM	ENSMUSG00000027803.15	ENSMUST00000120977.2	4533	7	112436	2092	112354	-2092	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAACTGTTTGAAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	57370895	57365294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57366532_57369939_57370053_57370863
ENSMUSG00000027803.15_57365363_57370950_1	chr3	-	1369	3	ISM	ENSMUSG00000027803.15	ENSMUST00000120977.2	4533	7	112381	2160	112299	-2160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTGTATTCTGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	57370950	57365362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57366532_57369939_57370053_57370863
ENSMUSG00000027803.15_57365579_57409211_1	chr3	-	1447	5	ISM	ENSMUSG00000027803.15	ENSMUST00000120977.2	4533	7	74120	2376	74038	-2376	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCAGCTTAGAATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	57409211	57365578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152
ENSMUSG00000027803.15_57365737_57409299_1	chr3	-	1377	5	ISM	ENSMUSG00000027803.15	ENSMUST00000120977.2	4533	7	74032	2534	73950	-2534	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCAGCTCCATTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	57409299	57365736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152
ENSMUSG00000027803.15_57365958_57482479_1	chr3	-	1382	6	ISM	ENSMUSG00000027803.15	ENSMUST00000120977.2	4533	7	852	2755	770	-2755	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTACAGTTTCAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	57482479	57365957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243
ENSMUSG00000027803.15_57366337_57483249_1	chr3	-	1430	7	FSM	ENSMUSG00000027803.15	ENSMUST00000029380.14	4697	7	0	3267	0	-3134	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACGTGATGCAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	57483249	57366336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483021
ENSMUSG00000027804.14_79498795_79505068_1	chr3	+	395	4	ISM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	123	5889	123	-5889	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGACTCCTCATCTGGACG	NA	NA	NA	NA	NA	NA	NA	NA	79498794	79505068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991
ENSMUSG00000027804.14_79500996_79505180_1	chr3	+	358	3	ISM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	2324	5777	2324	-5777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAAGTTACGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79500995	79505180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_79501058_79502508_79502616_79504991
ENSMUSG00000027804.14_79500996_79506144_1	chr3	+	404	4	ISM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	2324	4813	2324	-4813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAATCTTCCCCAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	79500995	79506144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_79501058_79502508_79502616_79504991_79505181_79506098
ENSMUSG00000027804.14_79502590_79506376_1	chr3	+	356	4	ISM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	3918	4581	3918	-4581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATCTGAAGACTTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79502589	79506376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_79502616_79504991_79505181_79506098_79506222_79506358
ENSMUSG00000027804.14_79505047_79507578_1	chr3	+	378	4	ISM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	6375	3379	6375	-3379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGGCTGTTATTGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	79505046	79507578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_79505181_79506098_79506222_79506358_79506466_79507564
ENSMUSG00000027804.14_79505116_79507621_1	chr3	+	352	4	ISM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	6444	3336	6444	-3336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGCCTTAAGTTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	79505115	79507621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_79505181_79506098_79506222_79506358_79506466_79507564
ENSMUSG00000027804.14_79505159_79507689_1	chr3	+	377	4	ISM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	6487	3268	6487	-3268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACAGTTGCTTAGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	79505158	79507689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_79505181_79506098_79506222_79506358_79506466_79507564
ENSMUSG00000027804.14_79506430_79510385_1	chr3	+	356	5	ISM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	7758	572	7758	-572	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATAAAGAGAAGGCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	79506429	79510385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ENSMUSG00000027804.14_79509577_79510583_1	chr3	+	378	3	ISM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	10905	374	10905	-374	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAATCTCATTTTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	79509576	79510583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_79509666_79509749_79509793_79510337
ENSMUSG00000027805.17_57749326_57752687_1	chr3	-	1236	2	FSM	ENSMUSG00000027805.17	ENST00000481767.5	1311	2	103	-28	103	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTCCATTGGACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	57752687	57749325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_57750469_57752594
ENSMUSG00000027805.17_57749326_57752788_1	chr3	-	1337	2	FSM	ENSMUSG00000027805.17	ENST00000481767.5	1311	2	2	-28	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTCCATTGGACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	57752788	57749325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_57750469_57752594
ENSMUSG00000027805.17_57750719_57752788_1	chr3	-	166	2	ISM	ENSMUSG00000027805.17	ENST00000490975.1	709	3	2187	340	2	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGAAGGGGTCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	57752788	57750718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57750736_57752639
ENSMUSG00000027805.17_57752664_57754819_1	chr3	-	172	2	FSM	ENSMUSG00000027805.17	ENSMUST00000120289.3	905	2	151	582	151	-582	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACATCCGGACAAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	57754819	57752663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_57752788_57754771
ENSMUSG00000027805.17_57752723_57754862_1	chr3	-	156	2	FSM	ENSMUSG00000027805.17	ENSMUST00000120289.3	905	2	108	641	108	-641	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGCAAAGAAGTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	57754862	57752722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_57752788_57754771
ENSMUSG00000027805.17_57752759_57754970_1	chr3	-	228	2	FSM	ENSMUSG00000027805.17	ENSMUST00000120289.3	905	2	0	677	0	-677	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCGGGAAGGTTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	57754970	57752758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_57752788_57754771
ENSMUSG00000027808.9_58430751_58432525_1	chr3	-	561	2	ISM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	788	3513	788	-3513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTTACCACAATCATTG	NA	NA	NA	NA	NA	NA	NA	NA	58432525	58430750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_58431290_58432503
ENSMUSG00000027808.9_58430848_58432565_1	chr3	-	504	2	ISM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	748	3610	748	-3610	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCCTTTTTACTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	58432565	58430847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_58431290_58432503
ENSMUSG00000027808.9_58430983_58432964_1	chr3	-	517	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	349	3745	349	-3745	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAATGAGTTTTATATG	NA	NA	NA	NA	NA	NA	NA	NA	58432964	58430982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_58431290_58432503_58432580_58432830
ENSMUSG00000027808.9_58431055_58433028_1	chr3	-	509	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	285	3817	285	-3817	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAAAAGCACCACATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	58433028	58431054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_58431290_58432503_58432580_58432830
ENSMUSG00000027808.9_58431176_58433138_1	chr3	-	498	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	175	3938	175	-3938	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTAAAAACCATTGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	58433138	58431175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_58431290_58432503_58432580_58432830
ENSMUSG00000027808.9_58432504_58433313_1	chr3	-	559	2	ISM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	0	5266	0	-5266	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTTTGGGGGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	58433313	58432503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_58432580_58432830
ENSMUSG00000027809.15_79511309_79535869_1	chr3	-	1718	12	NNC	ENSMUSG00000027809.15	novel	1820	12	NA	NA	96	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTAGGCCTTCATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	79535869	79511308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_79511473_79512211_79512428_79512936_79513120_79517105_79517275_79519218_79519363_79520928_79521070_79522306_79522454_79523230_79523309_79525613_79525733_79526145_79526228_79530044_79530275_79535824
ENSMUSG00000027809.15_79511309_79535869_2	chr3	-	1724	12	FSM	ENSMUSG00000027809.15	ENST00000307738.5	1820	12	96	0	96	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTAGGCCTTCATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	79535869	79511308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_79511473_79512211_79512434_79512936_79513120_79517105_79517275_79519218_79519363_79520928_79521070_79522306_79522454_79523230_79523309_79525613_79525733_79526145_79526228_79530044_79530275_79535824
ENSMUSG00000027809.15_79511309_79535990_1	chr3	-	1845	12	FSM	ENSMUSG00000027809.15	ENST00000307738.5	1820	12	-25	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTAGGCCTTCATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	79535990	79511308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_79511473_79512211_79512434_79512936_79513120_79517105_79517275_79519218_79519363_79520928_79521070_79522306_79522454_79523230_79523309_79525613_79525733_79526145_79526228_79530044_79530275_79535824
ENSMUSG00000027809.15_79511349_79517139_1	chr3	-	738	5	ISM	ENSMUSG00000027809.15	ENST00000684622.1	2185	14	18918	0	18826	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGAAGGAGGAGGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	79517139	79511348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79511473_79511584_79511756_79512207_79512434_79512936_79513120_79517105
ENSMUSG00000027809.15_79511401_79517190_1	chr3	-	737	5	ISM	ENSMUSG00000027809.15	ENST00000684622.1	2185	14	18867	52	18775	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGTAAAACATGTGATATC	NA	NA	NA	NA	NA	NA	NA	NA	79517190	79511400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79511473_79511584_79511756_79512207_79512434_79512936_79513120_79517105
ENSMUSG00000027809.15_79511440_79517255_1	chr3	-	763	5	ISM	ENSMUSG00000027809.15	ENST00000684622.1	2185	14	18802	91	18710	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGATTTCGATTACAGATA	NA	NA	NA	NA	NA	NA	NA	NA	79517255	79511439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79511473_79511584_79511756_79512207_79512434_79512936_79513120_79517105
ENSMUSG00000027809.15_79511638_79519261_1	chr3	-	739	5	ISM	ENSMUSG00000027809.15	ENST00000684622.1	2185	14	16796	289	16704	-289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAGTTTATATTAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	79519261	79511637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79511756_79512207_79512434_79512936_79513120_79517105_79517275_79519218
ENSMUSG00000027809.15_79511682_79519319_1	chr3	-	753	5	ISM	ENSMUSG00000027809.15	ENST00000684622.1	2185	14	16738	333	16646	-333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGTTAAATAACCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	79519319	79511681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79511756_79512207_79512434_79512936_79513120_79517105_79517275_79519218
ENSMUSG00000027809.15_79521026_79530901_1	chr3	-	754	7	ISM	ENSMUSG00000027809.15	ENST00000684622.1	2185	14	5156	9677	5064	-9677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACACTGTTGGTTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	79530901	79521025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79521070_79522306_79522454_79523230_79523309_79525613_79525733_79526145_79526228_79530044_79530275_79530847
ENSMUSG00000027809.15_79523231_79535990_1	chr3	-	813	6	ISM	ENSMUSG00000027809.15	ENST00000684622.1	2185	14	67	11882	14	-11882	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATACCTTTTAATAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	79535990	79523230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79523309_79525613_79525733_79526145_79526228_79530044_79530275_79530847_79530986_79535824
ENSMUSG00000027810.15_58433242_58464748_2	chr3	+	2125	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	0	174	0	-54	multi-exon	TRUE	canonical	NA	NA	NA	NA	1274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTAATGATGTCTATTC	NA	NA	NA	NA	NA	NA	NA	NA	58433241	58464748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ENSMUSG00000027810.15_58433350_58464748_1	chr3	+	2017	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	108	174	108	-54	multi-exon	FALSE	canonical	NA	NA	NA	NA	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTAATGATGTCTATTC	NA	NA	NA	NA	NA	NA	NA	NA	58433349	58464748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ENSMUSG00000027810.15_58433350_58464802_1	chr3	+	2071	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	108	120	108	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGTAATAAAGAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	58433349	58464802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ENSMUSG00000027810.15_58433464_58464922_1	chr3	+	2077	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	222	0	222	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	58433463	58464922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ENSMUSG00000027810.15_58438554_58455882_1	chr3	+	623	7	ISM	ENSMUSG00000027810.15	ENST00000406576.7	1732	11	48	8920	48	-8920	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGCCTGCGAAAGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	58438553	58455882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_58438578_58444954_58445030_58446948_58447068_58452415_58452490_58452648_58452794_58452920_58453038_58455813
ENSMUSG00000027810.15_58447040_58456054_1	chr3	+	605	5	ISM	ENSMUSG00000027810.15	ENST00000406576.7	1732	11	8534	8748	8534	-8748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTAAGCCAGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	58447039	58456054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_58447068_58452415_58452490_58452648_58452794_58452920_58453038_58455813
ENSMUSG00000027822.17_63849751_63871323_1	chr3	-	1975	4	FSM	ENSMUSG00000027822.17	ENST00000646424.1	2656	4	700	-19	470	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAAGCTGTTTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	63871323	63849750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_63850838_63851986_63852203_63855492_63855678_63870836
ENSMUSG00000027822.17_63849835_63871379_1	chr3	-	1947	4	FSM	ENSMUSG00000027822.17	ENST00000646424.1	2656	4	644	65	414	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTACTGTAGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	63871379	63849834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_63850838_63851986_63852203_63855492_63855678_63870836
ENSMUSG00000027823.10_63883634_63889897_1	chr3	+	346	3	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	107	40103	107	-40103	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTACCATTGGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	63883633	63889897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_63883732_63887556_63887739_63889831
ENSMUSG00000027823.10_63883693_63889946_1	chr3	+	336	3	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	166	40054	166	-40054	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATCTGTGAATTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	63883692	63889946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_63883732_63887556_63887739_63889831
ENSMUSG00000027823.10_63895158_63898076_1	chr3	+	359	3	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	11631	31924	11631	-31924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAAGCTTGGAATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	63895157	63898076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_63895184_63897575_63897770_63897937
ENSMUSG00000027823.10_63897681_63900724_1	chr3	+	368	3	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	14154	29276	14154	-29276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAGAAAAGAAAAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	63897680	63900724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_63897770_63897937_63898104_63900611
ENSMUSG00000027823.10_63898001_63901329_1	chr3	+	364	3	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	14474	28671	14474	-28671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAGCCGAACTCATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	63898000	63901329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_63898104_63900611_63900764_63901220
ENSMUSG00000027823.10_63898081_63901394_1	chr3	+	349	3	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	14554	28606	14554	-28606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGGCTTGTGAGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	63898080	63901394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_63898104_63900611_63900764_63901220
ENSMUSG00000027823.10_63900664_63904291_1	chr3	+	338	3	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	17137	25709	17137	-25709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACCTGCCAGAAGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	63900663	63904291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_63900764_63901220_63901395_63904227
ENSMUSG00000027823.10_63901335_63908995_1	chr3	+	344	4	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	17808	21005	17808	-21005	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTACAAGTCTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	63901334	63908995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_63901395_63904227_63904334_63906022_63906139_63908933
ENSMUSG00000027823.10_63906069_63921722_1	chr3	+	360	4	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	22542	8278	22542	-8278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCCAACTTTTTTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	63906068	63921722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_63906139_63908933_63909060_63918977_63919094_63921674
ENSMUSG00000027823.10_63919016_63922977_1	chr3	+	341	3	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	35489	7023	35489	-7023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTACCTGCAACACCT	NA	NA	NA	NA	NA	NA	NA	NA	63919015	63922977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_63919094_63921674_63921806_63922845
ENSMUSG00000027823.10_63921762_63924177_1	chr3	+	341	3	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	38235	5823	38235	-5823	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAACTGAGGCTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	63921761	63924177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_63921806_63922845_63923019_63924053
ENSMUSG00000027823.10_63922964_63924334_1	chr3	+	336	2	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	39437	5666	39437	-5666	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGGTAAATAATCATGGC	NA	NA	NA	NA	NA	NA	NA	NA	63922963	63924334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_63923019_63924053
ENSMUSG00000027827.18_65173910_65284378_1	chr3	+	1290	12	NNC	ENSMUSG00000027827.18	novel	1289	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCCTCACTCTTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	65173909	65284378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_65173956_65202685_65202724_65205089_65205170_65207008_65207054_65209568_65209614_65211540_65211585_65263684_65263771_65264442_65264564_65265671_65265764_65272022_65272144_65278777_65278871_65283899
ENSMUSG00000027827.18_65173910_65284378_2	chr3	+	1293	12	ISM	ENSMUSG00000027827.18	ENST00000618897.4	3652	13	157606	1251	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCCTCACTCTTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	65173909	65284378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_65173956_65202685_65202724_65205089_65205170_65207008_65207054_65209568_65209614_65211540_65211585_65263684_65263771_65264442_65264564_65265668_65265764_65272022_65272144_65278777_65278871_65283899
ENSMUSG00000027828.13_65288579_65290463_1	chr3	-	928	2	ISM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	9581	1503	9505	606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATGAGAGACCAAAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	65290463	65288578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_65289456_65290412
ENSMUSG00000027828.13_65288819_65298852_1	chr3	-	975	4	ISM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	1192	1743	1116	366	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGGCAGCCAAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	65298852	65288818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745
ENSMUSG00000027828.13_65289101_65299974_1	chr3	-	876	5	FSM	ENSMUSG00000027828.13	ENST00000476217.5	786	5	-6	-84	0	84	multi-exon	FALSE	canonical	NA	NA	NA	NA	2265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTCAGAGGTCATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	65299974	65289100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_65289456_65290398_65290545_65295152_65295252_65298745_65298873_65299825
ENSMUSG00000027828.13_65289101_65299974_2	chr3	-	862	5	FSM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	70	2025	0	84	multi-exon	FALSE	canonical	NA	NA	NA	NA	2220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTCAGAGGTCATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	65299974	65289100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
ENSMUSG00000027829.16_65862637_65865453_1	chr3	-	471	4	FSM	ENSMUSG00000027829.16	ENST00000295925.5	567	4	96	0	96	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGGCAACAGTGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	65865453	65862636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_65862698_65864273_65864384_65864921_65864997_65865228
ENSMUSG00000027833.17_66879901_66883208_1	chr3	-	1452	3	ISM	ENSMUSG00000027833.17	ENSMUST00000162060.9	1537	4	2572	-212	2572	212	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGCCTTTGATCCCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	66883208	66879900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_66881241_66882776_66882866_66883185
ENSMUSG00000027833.17_66880791_66889214_1	chr3	-	1477	5	FSM	ENSMUSG00000027833.17	ENST00000483851.7	3283	5	63	1743	63	-199	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACCAGCCCAGGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	66889214	66880790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_66881241_66882776_66882866_66883185_66883244_66885518_66885728_66888543
ENSMUSG00000027845.16_103710336_103716796_1	chr3	-	1783	3	FSM	ENSMUSG00000027845.16	ENST00000650596.1	1785	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTACAGCGTAGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	103716796	103710335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_103711372_103715387_103715554_103716215
ENSMUSG00000027848.13_103643107_103644444_1	chr3	-	1050	2	ISM	ENSMUSG00000027848.13	ENSMUST00000029440.10	5465	3	873	4126	873	-4111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCCTGCAGTTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	103644444	103643106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103643980_103644267
ENSMUSG00000027848.13_103643309_103645284_1	chr3	-	1104	3	FSM	ENSMUSG00000027848.13	ENSMUST00000029440.10	5465	3	33	4328	33	-4313	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGGCAGCACTCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	103645284	103643308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_103643980_103644267_103644554_103645137
ENSMUSG00000027849.20_103482547_103493007_1	chr3	+	660	2	ISM	ENSMUSG00000027849.20	ENSMUST00000121834.8	1710	7	0	45255	0	-41865	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCGTGCTCCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	103482546	103493007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_103482857_103492657
ENSMUSG00000027849.20_103482694_103494556_1	chr3	+	520	3	ISM	ENSMUSG00000027849.20	ENSMUST00000121834.8	1710	7	147	43706	0	-40316	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAAGCGCCACCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	103482693	103494556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_103482857_103492657_103493007_103494548
ENSMUSG00000027849.20_103492686_103494822_1	chr3	+	595	2	ISM	ENSMUSG00000027849.20	ENSMUST00000118117.8	1856	6	9228	40050	9228	-40050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGAAGTTCTGACCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	103492685	103494822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_103493007_103494548
ENSMUSG00000027849.20_103492754_103494883_1	chr3	+	588	2	ISM	ENSMUSG00000027849.20	ENSMUST00000118117.8	1856	6	9296	39989	9296	-39989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCGGGTGCACCGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	103492753	103494883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_103493007_103494548
ENSMUSG00000027849.20_103492802_103494940_1	chr3	+	597	2	ISM	ENSMUSG00000027849.20	ENSMUST00000118117.8	1856	6	9344	39932	9344	-39932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGCCCTACGAGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	103492801	103494940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_103493007_103494548
ENSMUSG00000027849.20_103494720_103532887_1	chr3	+	587	3	ISM	ENSMUSG00000027849.20	ENSMUST00000118117.8	1856	6	11262	1985	11262	-1985	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAACCCCATCTACAAC	NA	NA	NA	NA	NA	NA	NA	NA	103494719	103532887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_103495111_103528101_103528223_103532812
ENSMUSG00000027849.20_103494838_103534335_1	chr3	+	604	4	ISM	ENSMUSG00000027849.20	ENSMUST00000118117.8	1856	6	11380	537	11380	-537	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCAATGCTGAAGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	103494837	103534335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_103495111_103528101_103528223_103532812_103532985_103534297
ENSMUSG00000027849.20_103495058_103539834_1	chr3	+	616	6	ISM	ENSMUSG00000027849.20	ENST00000641643.2	2924	8	12470	1181	11600	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCACAGCGGAGCCGATG	NA	NA	NA	NA	NA	NA	NA	NA	103495057	103539834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_103495111_103528101_103528223_103532812_103532985_103534297_103534428_103538217_103538286_103539762
ENSMUSG00000027849.20_103538222_103540300_1	chr3	+	602	2	ISM	ENSMUSG00000027849.20	ENST00000641643.2	2924	8	55634	715	54764	466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTAGGAGCCTCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	103538221	103540300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_103538286_103539762
ENSMUSG00000027852.15_102965664_102972123_1	chr3	+	1300	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	63	3107	-19	408	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAGGCTCCATTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	102965663	102972123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ENSMUSG00000027852.15_102967593_102972405_1	chr3	+	1285	5	ISM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	1992	2825	1910	690	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACTGATAATCTAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	102967592	102972405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ENSMUSG00000027852.15_102969725_102972557_1	chr3	+	1299	4	ISM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	4124	2673	4042	842	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTAGCAGACAGGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	102969724	102972557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102969850_102970645_102970770_102971431_102971474_102971549
ENSMUSG00000027852.15_102969785_102972601_1	chr3	+	1283	4	ISM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	4184	2629	4102	886	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATATATCTATCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	102969784	102972601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102969850_102970645_102970770_102971431_102971474_102971549
ENSMUSG00000027852.15_102970675_102972704_1	chr3	+	1292	3	ISM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	5074	2526	4992	989	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGTTATCTCGGTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	102970674	102972704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102970770_102971431_102971474_102971549
ENSMUSG00000027852.15_102970714_102972771_1	chr3	+	1320	3	ISM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	5113	2459	5031	1056	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTAGCATCACAGAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	102970713	102972771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102970770_102971431_102971474_102971549
ENSMUSG00000027854.13_102903111_102909152_1	chr3	+	676	5	FSM	ENSMUSG00000027854.13	ENST00000369528.9	1240	5	-12	576	0	-358	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCGTCAGAGCGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	102903110	102909152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_102903295_102903471_102903578_102904558_102904702_102905805_102905920_102909023
ENSMUSG00000027854.13_102903111_102909161_1	chr3	+	685	5	FSM	ENSMUSG00000027854.13	ENST00000369528.9	1240	5	-12	567	0	-349	multi-exon	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGAGAAGCCGTGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	102903110	102909161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_102903295_102903471_102903578_102904558_102904702_102905805_102905920_102909023
ENSMUSG00000027854.13_102903237_102909209_1	chr3	+	607	5	FSM	ENSMUSG00000027854.13	ENST00000369528.9	1240	5	114	519	114	-301	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGACTTGACTTAGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	102903236	102909209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_102903295_102903471_102903578_102904558_102904702_102905805_102905920_102909023
ENSMUSG00000027854.13_102903492_102909342_1	chr3	+	662	4	ISM	ENSMUSG00000027854.13	ENST00000369528.9	1240	5	369	386	369	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGTCACTCTAGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	102903491	102909342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102903578_102904558_102904702_102905805_102905920_102909023
ENSMUSG00000027854.13_102905806_102909558_1	chr3	+	649	2	ISM	ENSMUSG00000027854.13	ENSMUST00000119450.2	774	3	2695	-48	2683	48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGCATGACTTCAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	102905805	102909558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102905920_102909023
ENSMUSG00000027855.14_102727924_102841544_1	chr3	-	2367	26	FSM	ENSMUSG00000027855.14	ENST00000369518.1	2471	26	35	69	35	-69	multi-exon	TRUE	canonical	NA	NA	NA	NA	1232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGAGAAAAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	102841544	102727923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102839958_102840124_102841520
ENSMUSG00000027855.14_102727942_102760750_1	chr3	-	434	5	ISM	ENSMUSG00000027855.14	ENST00000613524.4	2396	25	80829	87	80829	-87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCTACTGGAGGAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	102760750	102727941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_102727999_102748177_102748358_102752347_102752405_102759434_102759528_102760703
ENSMUSG00000027855.14_102748207_102761446_1	chr3	-	432	5	ISM	ENSMUSG00000027855.14	ENST00000613524.4	2396	25	80133	20352	80133	-20352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATTTTACCTACAACA	NA	NA	NA	NA	NA	NA	NA	NA	102761446	102748206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_102748358_102752347_102752405_102759434_102759528_102760703_102760815_102761426
ENSMUSG00000027855.14_102748257_102761498_1	chr3	-	434	5	ISM	ENSMUSG00000027855.14	ENST00000613524.4	2396	25	80081	20402	80081	-20402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAGTGGCAAATCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	102761498	102748256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_102748358_102752347_102752405_102759434_102759528_102760703_102760815_102761426
ENSMUSG00000027855.14_102786090_102807452_1	chr3	-	480	5	ISM	ENSMUSG00000027855.14	ENST00000369518.1	2471	26	34127	58235	34127	-58235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTTATACTTAACAATA	NA	NA	NA	NA	NA	NA	NA	NA	102807452	102786089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347
ENSMUSG00000027855.14_102803171_102822485_1	chr3	-	471	6	ISM	ENSMUSG00000027855.14	ENST00000369518.1	2471	26	19094	75316	19094	-75316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGGCAGTTATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	102822485	102803170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471
ENSMUSG00000027855.14_102803221_102822536_1	chr3	-	472	6	ISM	ENSMUSG00000027855.14	ENST00000369518.1	2471	26	19043	75366	19043	-75366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAGTGATATGGCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	102822536	102803220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471
ENSMUSG00000027855.14_102823120_102836638_1	chr3	-	481	6	ISM	ENSMUSG00000027855.14	ENST00000369518.1	2471	26	4941	95265	4941	-95265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGATTTAAAAAATGACT	NA	NA	NA	NA	NA	NA	NA	NA	102836638	102823119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564
ENSMUSG00000027855.14_102830324_102841556_1	chr3	-	465	6	ISM	ENSMUSG00000027855.14	ENST00000369518.1	2471	26	23	102469	23	-102469	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTAGGATTCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	102841556	102830323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102839958_102840124_102841520
ENSMUSG00000027859.11_102421324_102428164_1	chr3	+	747	2	FSM	ENSMUSG00000027859.11	ENST00000681124.1	945	2	53	145	53	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTGCAGCCCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	102421323	102428164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_102421396_102427489
ENSMUSG00000027860.16_102064936_102074246_1	chr3	-	1339	4	ISM	ENSMUSG00000027860.16	ENST00000355485.7	2528	8	29966	535	29966	-535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAGAGAGAGCCTACCTG	NA	NA	NA	NA	NA	NA	NA	NA	102074246	102064935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153
ENSMUSG00000027860.16_102065383_102091657_1	chr3	-	1324	5	ISM	ENSMUSG00000027860.16	ENST00000355485.7	2528	8	12555	982	12555	116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAGGAGATGCCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	102091657	102065382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266
ENSMUSG00000027860.16_102065670_102096804_1	chr3	-	1334	6	ISM	ENSMUSG00000027860.16	ENST00000355485.7	2528	8	7408	1269	7408	-171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCAGCCTCGTGGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	102096804	102065669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724
ENSMUSG00000027861.14_101993862_102033959_1	chr3	+	794	6	ISM	ENSMUSG00000027861.14	ENSMUST00000165540.9	2434	12	0	19871	0	-19871	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGAGCTTGTGGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	101993861	102033959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_101994189_102017555_102017641_102020380_102020482_102024179_102024292_102027232_102027307_102033864
ENSMUSG00000027861.14_102024228_102052728_1	chr3	+	762	8	ISM	ENSMUSG00000027861.14	ENSMUST00000029454.12	2556	11	30497	1102	30366	-1102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGACGATGAATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	102024227	102052728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102024292_102027232_102027307_102033864_102033996_102035256_102035303_102040692_102040748_102049495_102049597_102051469_102051545_102052512
ENSMUSG00000027861.14_102049527_102053124_1	chr3	+	757	3	ISM	ENSMUSG00000027861.14	ENSMUST00000165540.9	2434	12	55665	706	55665	-706	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTATTAGTTCACAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	102049526	102053124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102049597_102051469_102051545_102052512
ENSMUSG00000027865.11_100077409_100090038_1	chr3	+	512	5	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	106	24485	106	-19748	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGTATTTGCTGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	100077408	100090038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992
ENSMUSG00000027865.11_100085169_100095233_1	chr3	+	514	5	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	7866	19290	7866	-14553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATTGGCTCTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	100085168	100095233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189
ENSMUSG00000027865.11_100085215_100095296_1	chr3	+	531	5	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	7912	19227	7912	-14490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCCAGGGACAGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	100085214	100095296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189
ENSMUSG00000027865.11_100085291_100095349_1	chr3	+	508	5	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	7988	19174	7988	-14437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACAGGCTTGTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	100085290	100095349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189
ENSMUSG00000027865.11_100085550_100098278_1	chr3	+	563	5	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	8247	16245	8247	-11508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCTTAATGATCACTTA	NA	NA	NA	NA	NA	NA	NA	NA	100085549	100098278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201
ENSMUSG00000027865.11_100089993_100099019_1	chr3	+	551	5	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	12690	15504	12690	-10767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCATAAATGCTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	100089992	100099019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942
ENSMUSG00000027865.11_100093898_100101866_1	chr3	+	523	5	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	16595	12657	16595	-7920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCACACACTGACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	100093897	100101866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805
ENSMUSG00000027865.11_100093962_100101913_1	chr3	+	506	5	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	16659	12610	16659	-7873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAGAAACTCTACGATGT	NA	NA	NA	NA	NA	NA	NA	NA	100093961	100101913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805
ENSMUSG00000027865.11_100094031_100103900_1	chr3	+	511	6	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	16728	10623	16728	-5886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCGTTCAAAGGTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	100094030	100103900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858
ENSMUSG00000027865.11_100095201_100109318_1	chr3	+	527	6	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	17898	5205	17898	-468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTCAGGACTGAAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	100095200	100109318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289
ENSMUSG00000027865.11_100095239_100109395_1	chr3	+	566	6	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	17936	5128	17936	-391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGACTTTCCTCCTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	100095238	100109395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289
ENSMUSG00000027865.11_100095333_100109425_1	chr3	+	502	6	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	18030	5098	18030	-361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCGAGGGTAAGTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	100095332	100109425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289
ENSMUSG00000027865.11_100098225_100113156_1	chr3	+	539	6	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	20922	1367	20922	-1141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGTCACAGGATTCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	100098224	100113156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
ENSMUSG00000027865.11_100098995_100113281_1	chr3	+	558	5	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	21692	1242	21692	-1016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGCACATAAACAATCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	100098994	100113281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
ENSMUSG00000027865.11_100109357_100113611_1	chr3	+	539	3	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	32054	912	32054	-686	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCCTCAGATCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	100109356	100113611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_100109434_100113087_100113480_100113541
ENSMUSG00000027865.11_100109397_100113697_1	chr3	+	585	3	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	32094	826	32094	-600	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAATGTGTATGATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	100109396	100113697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_100109434_100113087_100113480_100113541
ENSMUSG00000027865.11_100113378_100113971_1	chr3	+	532	2	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	36075	552	36075	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTCTTCTCAGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	100113377	100113971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_100113480_100113541
ENSMUSG00000027878.12_97921002_97980015_1	chr3	+	533	4	FSM	ENSMUSG00000027878.12	ENST00000650865.1	909	4	153	223	148	-223	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGTGTGAAGCTGATAT	NA	NA	NA	NA	NA	NA	NA	NA	97921001	97980015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_97921088_97955051_97955126_97978175_97978436_97979902
ENSMUSG00000027878.12_97921002_97980139_1	chr3	+	657	4	FSM	ENSMUSG00000027878.12	ENST00000650865.1	909	4	153	99	148	-99	multi-exon	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACAGCCCTTATGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	97921001	97980139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_97921088_97955051_97955126_97978175_97978436_97979902
ENSMUSG00000027878.12_97921010_97989281_1	chr3	+	805	5	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	156	68396	156	9043	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTGTCAGAATGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	97921009	97989281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_97921088_97955043_97955126_97978175_97978436_97979902_97980239_97989232
ENSMUSG00000027878.12_97978211_98005529_1	chr3	+	802	4	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	57357	52148	57357	25291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGATGACTGCAGCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	97978210	98005529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_97978436_97979902_97980239_97989232_97989356_98005411
ENSMUSG00000027878.12_97980056_98007613_1	chr3	+	794	5	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	59202	50064	59202	27375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACATCAACGAGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	97980055	98007613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_97980239_97989232_97989356_98005411_98005646_98006739_98006896_98007515
ENSMUSG00000027878.12_98005483_98011737_1	chr3	+	809	6	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	84629	45940	84629	31499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGGATCGACTCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	98005482	98011737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98005646_98006739_98006896_98007515_98007705_98008836_98008951_98009641_98009756_98011664
ENSMUSG00000027878.12_98005538_98011788_1	chr3	+	805	6	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	84684	45889	84684	31550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTAGTGACCAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	98005537	98011788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98005646_98006739_98006896_98007515_98007705_98008836_98008951_98009641_98009756_98011664
ENSMUSG00000027878.12_98006811_98014422_1	chr3	+	796	6	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	85957	43255	85957	34184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGACGGCATCAATCGC	NA	NA	NA	NA	NA	NA	NA	NA	98006810	98014422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98006896_98007515_98007705_98008836_98008951_98009641_98009756_98011664_98011899_98014362
ENSMUSG00000027878.12_98007532_98018994_1	chr3	+	875	6	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	86678	38683	86678	-38683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTGAACGAGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	98007531	98018994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98007705_98008836_98008951_98009641_98009756_98011664_98011899_98014362_98014474_98018865
ENSMUSG00000027878.12_98008878_98020440_1	chr3	+	840	6	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	88024	37237	88024	-37237	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGGTGTACCTGCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	98008877	98020440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98008951_98009641_98009756_98011664_98011899_98014362_98014474_98018865_98019059_98020325
ENSMUSG00000027878.12_98009680_98022632_1	chr3	+	845	6	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	88826	35045	88826	-35045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGCCACTGCATGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	98009679	98022632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98009756_98011664_98011899_98014362_98014474_98018865_98019059_98020325_98020472_98022547
ENSMUSG00000027878.12_98011746_98024117_1	chr3	+	818	6	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	90892	33560	90892	-33560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCCTGGCTGGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	98011745	98024117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98011899_98014362_98014474_98018865_98019059_98020325_98020472_98022547_98022662_98024016
ENSMUSG00000027878.12_98014383_98024628_1	chr3	+	784	6	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	93529	33049	93529	-33049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGTGAAGAGGACATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	98014382	98024628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98014474_98018865_98019059_98020325_98020472_98022547_98022662_98024016_98024137_98024508
ENSMUSG00000027878.12_98018919_98028153_1	chr3	+	784	6	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	98065	29524	98065	-29524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAGCCCTGTAAGAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	98018918	98028153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98019059_98020325_98020472_98022547_98022662_98024016_98024137_98024508_98024662_98028042
ENSMUSG00000027878.12_98020379_98029311_1	chr3	+	801	6	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	99525	28366	99525	-28366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCAATGAGTGCAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	98020378	98029311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98020472_98022547_98022662_98024016_98024137_98024508_98024662_98028042_98028272_98029219
ENSMUSG00000027878.12_98024052_98031163_1	chr3	+	772	5	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	103198	26514	103198	-26514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGTGATGTGCTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	98024051	98031163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98024137_98024508_98024662_98028042_98028272_98029219_98029422_98031060
ENSMUSG00000027878.12_98024564_98031587_1	chr3	+	806	5	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	103710	26090	103710	-26090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCAATCCATGCCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	98024563	98031587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98024662_98028042_98028272_98029219_98029422_98031060_98031215_98031464
ENSMUSG00000027878.12_98028215_98038579_1	chr3	+	797	6	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	107361	19098	107361	-19098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGACCGGATTGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	98028214	98038579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98028272_98029219_98029422_98031060_98031215_98031464_98031650_98033427_98033561_98038513
ENSMUSG00000027878.12_98031068_98041978_1	chr3	+	806	5	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	110214	15699	110214	-15699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCCCAGTAAGTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	98031067	98041978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98031215_98031464_98031650_98033427_98033561_98038513_98038751_98041874
ENSMUSG00000027878.12_98031542_98042845_1	chr3	+	795	5	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	110688	14832	110688	-14832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCGTTCGGGGGCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	98031541	98042845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98031650_98033427_98033561_98038513_98038751_98041874_98041988_98042641
ENSMUSG00000027878.12_98031598_98042905_1	chr3	+	799	5	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	110744	14772	110744	-14772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTCAGAGTCAGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	98031597	98042905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98031650_98033427_98033561_98038513_98038751_98041874_98041988_98042641
ENSMUSG00000027878.12_98033490_98043014_1	chr3	+	794	4	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	112636	14663	112636	-14663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACCCCTGGGCCAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	98033489	98043014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98033561_98038513_98038751_98041874_98041988_98042641
ENSMUSG00000027878.12_98041894_98044798_1	chr3	+	808	3	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	121040	12879	121040	-12879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACCAACTTGCGCATTAA	NA	NA	NA	NA	NA	NA	NA	NA	98041893	98044798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98041988_98042641_98043148_98044590
ENSMUSG00000027878.12_98042728_98045747_1	chr3	+	820	3	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	121874	11930	121874	-11930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGACCAGTGCTTCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	98042727	98045747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98043148_98044590_98044945_98045701
ENSMUSG00000027878.12_98042940_98046075_1	chr3	+	823	4	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	122086	11602	122086	-11602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCTGGCTGCCGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	98042939	98046075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98043148_98044590_98044945_98045701_98045845_98045957
ENSMUSG00000027878.12_98043032_98046140_1	chr3	+	796	4	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	122178	11537	122178	-11537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGGACAGGATGCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	98043031	98046140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98043148_98044590_98044945_98045701_98045845_98045957
ENSMUSG00000027878.12_98044680_98048867_1	chr3	+	804	5	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	123826	8810	123826	-8810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCCATCCCTGGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	98044679	98048867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98044945_98045701_98045845_98045957_98046169_98046901_98046999_98048779
ENSMUSG00000027878.12_98044849_98050327_1	chr3	+	832	6	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	123995	7350	123995	-7350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCCTTCAAGCACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	98044848	98050327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98044945_98045701_98045845_98045957_98046169_98046901_98046999_98048779_98048946_98050208
ENSMUSG00000027878.12_98046007_98051753_1	chr3	+	803	5	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	125153	5924	125153	-5924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGCTGTGGAAGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	98046006	98051753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98046169_98046901_98046999_98048779_98048946_98050208_98050511_98051677
ENSMUSG00000027878.12_98048824_98053492_1	chr3	+	794	5	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	127970	4185	127970	-4185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACCGCATGCACCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	98048823	98053492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98048946_98050208_98050511_98051677_98051826_98052437_98052536_98053368
ENSMUSG00000027878.12_98048892_98053566_1	chr3	+	800	5	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	128038	4111	128038	-4111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTCTGCGCTCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	98048891	98053566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98048946_98050208_98050511_98051677_98051826_98052437_98052536_98053368
ENSMUSG00000027878.12_98050350_98053765_1	chr3	+	804	4	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	129496	3912	129496	-3912	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGAGCTCAGTGACTCTA	NA	NA	NA	NA	NA	NA	NA	NA	98050349	98053765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98050511_98051677_98051826_98052437_98052536_98053368
ENSMUSG00000027878.12_98051689_98053977_1	chr3	+	844	3	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	130835	3700	130835	-3700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCAGCACCGTGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	98051688	98053977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_98051826_98052437_98052536_98053368
ENSMUSG00000027879.10_97808506_97829280_1	chr3	+	1498	5	FSM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	0	1312	0	-1312	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTAGTTTGTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	97808505	97829280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_97808737_97814536_97814647_97819894_97820056_97821815_97821963_97828431
ENSMUSG00000027879.10_97814543_97829427_1	chr3	+	1408	4	ISM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	6037	1165	6000	-1165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGGGACTGTTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	97814542	97829427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_97814647_97819894_97820056_97821815_97821963_97828431
ENSMUSG00000027879.10_97814575_97829496_1	chr3	+	1445	4	ISM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	6069	1096	6032	-1096	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGGCCCAGCTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	97814574	97829496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_97814647_97819894_97820056_97821815_97821963_97828431
ENSMUSG00000027879.10_97819895_97829619_1	chr3	+	1496	3	ISM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	11389	973	11352	-973	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAATGCTATCCCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	97819894	97829619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_97820056_97821815_97821963_97828431
ENSMUSG00000027879.10_97821844_97829756_1	chr3	+	1444	2	ISM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	13338	836	13301	-836	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCACAAATTGCAAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	97821843	97829756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_97821963_97828431
ENSMUSG00000027882.19_108700683_108702229_1	chr3	-	610	2	ISM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	45598	191	45597	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAAACTGAGATTCATAA	NA	NA	NA	NA	NA	NA	NA	NA	108702229	108700682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108701181_108702117
ENSMUSG00000027882.19_108701097_108708134_1	chr3	-	606	6	ISM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	39693	605	39692	-593	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTAACTTTTTATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	108708134	108701096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050
ENSMUSG00000027882.19_108701146_108708189_1	chr3	-	612	6	ISM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	39638	654	39637	-642	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGATATAAAAATGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	108708189	108701145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050
ENSMUSG00000027882.19_108702188_108710927_1	chr3	-	654	7	ISM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	36900	1696	36899	-1684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACGTACTCTGAGATGCG	NA	NA	NA	NA	NA	NA	NA	NA	108710927	108702187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861
ENSMUSG00000027882.19_108704738_108712581_1	chr3	-	617	8	ISM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	35246	4246	35245	-4234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGGTGCCCAGCAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	108712581	108704737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553
ENSMUSG00000027882.19_108708050_108720284_1	chr3	-	657	7	ISM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	27543	7558	27542	-7546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGAGTGTGCGCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	108720284	108708049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193
ENSMUSG00000027882.19_108712374_108729204_1	chr3	-	626	6	ISM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	18623	11882	18622	-11870	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGTCTTTCAAGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	108729204	108712373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103
ENSMUSG00000027882.19_108712553_108729909_1	chr3	-	648	6	ISM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	17918	12061	17917	-12049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGAGCTTGTTCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	108729909	108712552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830
ENSMUSG00000027883.16_108585954_108604952_1	chr3	-	2028	7	ISM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	24673	0	13946	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTTAATCAAGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	108604952	108585953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843
ENSMUSG00000027883.16_108586389_108609133_1	chr3	-	2062	11	ISM	ENSMUSG00000027883.16	ENST00000674914.1	2321	15	20412	-509	9765	-435	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATTACATAACACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	108609133	108586388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060
ENSMUSG00000027883.16_108586542_108609829_1	chr3	-	2094	12	ISM	ENSMUSG00000027883.16	ENST00000674914.1	2321	15	19716	-356	9069	356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTGGAAATAATGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	108609829	108586541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714
ENSMUSG00000027883.16_108586598_108609829_1	chr3	-	2038	12	ISM	ENSMUSG00000027883.16	ENST00000674914.1	2321	15	19716	-300	9069	300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTAGTTGACAGGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	108609829	108586597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714
ENSMUSG00000027883.16_108586676_108609850_1	chr3	-	1981	12	ISM	ENSMUSG00000027883.16	ENST00000674914.1	2321	15	19695	-222	9048	222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTAGGGTTTGTGTAATAG	NA	NA	NA	NA	NA	NA	NA	NA	108609850	108586675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714
ENSMUSG00000027883.16_108586898_108618666_1	chr3	-	2055	14	ISM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	10959	944	232	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTAGCAAACCACAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	108618666	108586897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592
ENSMUSG00000027883.16_108586898_108618986_1	chr3	-	2195	13	FSM	ENSMUSG00000027883.16	ENST00000675086.1	2107	13	-88	0	-88	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTAGCAAACCACAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	108618986	108586897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_108587120_108589321_108589540_108589987_108590142_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592
ENSMUSG00000027883.16_108586898_108618986_2	chr3	-	2193	13	NNC	ENSMUSG00000027883.16	novel	2107	13	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTAGCAAACCACAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	108618986	108586897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_108587120_108589321_108589540_108589987_108590142_108597081_108597147_108604260_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592
ENSMUSG00000027883.16_108586898_108618986_3	chr3	-	2194	13	NNC	ENSMUSG00000027883.16	novel	2107	13	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTAGCAAACCACAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	108618986	108586897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_108587120_108589321_108589540_108589987_108590142_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608203_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592
ENSMUSG00000027883.16_108587039_108590088_1	chr3	-	182	2	ISM	ENSMUSG00000027883.16	ENST00000674700.1	1952	13	39457	141	28810	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCATCTTACGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	108590088	108587038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108587120_108589987
ENSMUSG00000027883.16_108587087_108590141_1	chr3	-	187	2	ISM	ENSMUSG00000027883.16	ENST00000674700.1	1952	13	39404	189	28757	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTGCTGCCACTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	108590141	108587086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108587120_108589987
ENSMUSG00000027883.16_108589318_108618986_1	chr3	-	2157	13	ISM	ENSMUSG00000027883.16	ENST00000441735.2	2142	14	10559	-1	-88	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATTCTGTGGAGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	108618986	108589317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592
ENSMUSG00000027883.16_108589465_108629461_1	chr3	-	2025	14	ISM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	164	3511	84	-146	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGACCAGAGGGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	108629461	108589464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
ENSMUSG00000027883.16_108589470_108609152_1	chr3	-	1202	10	ISM	ENSMUSG00000027883.16	ENST00000441735.2	2142	14	20393	151	9746	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCTGGATGACCAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	108609152	108589469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060
ENSMUSG00000027883.16_108590045_108629625_1	chr3	-	2057	13	ISM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	0	4091	0	-726	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTGTCGCACAACATCC	NA	NA	NA	NA	NA	NA	NA	NA	108629625	108590044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
ENSMUSG00000027883.16_108590058_108609829_1	chr3	-	1228	10	ISM	ENSMUSG00000027883.16	ENST00000441735.2	2142	14	19716	739	9069	-739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCACTTACAAGGAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	108609829	108590057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714
ENSMUSG00000027883.16_108604263_108618666_1	chr3	-	1291	9	ISM	ENSMUSG00000027883.16	ENST00000674914.1	2321	15	10879	17365	232	-14944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAGCACCCTGAAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	108618666	108604262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610462_108618572
ENSMUSG00000027883.16_108604842_108629432_1	chr3	-	1235	9	ISM	ENSMUSG00000027883.16	ENST00000674914.1	2321	15	113	17944	113	-15523	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAACAAAAGAAATCGCC	NA	NA	NA	NA	NA	NA	NA	NA	108629432	108604841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610462_108618572_108618665_108629356
ENSMUSG00000027883.16_108609718_108629432_1	chr3	-	622	4	ISM	ENSMUSG00000027883.16	ENST00000441735.2	2142	14	113	20399	113	-20399	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTAATAAAGATGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	108629432	108609717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108609851_108610180_108610403_108618592_108618784_108629356
ENSMUSG00000027883.16_108609765_108629482_1	chr3	-	625	4	ISM	ENSMUSG00000027883.16	ENST00000441735.2	2142	14	63	20446	63	-20446	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTGTTGCCAGCGACAC	NA	NA	NA	NA	NA	NA	NA	NA	108629482	108609764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108609851_108610180_108610403_108618592_108618784_108629356
ENSMUSG00000027884.17_108561265_108586156_1	chr3	+	2001	12	NNC	ENSMUSG00000027884.17	novel	2043	12	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3036	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	108561264	108586156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580738_108581952_108582280_108584000_108584295_108585855
ENSMUSG00000027884.17_108568760_108578260_1	chr3	+	446	5	ISM	ENSMUSG00000027884.17	ENST00000676454.1	1142	8	89	4003	89	-4003	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCGACAATTTATGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	108568759	108578260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108568812_108569247_108569350_108570839_108570948_108576014_108576156_108578217
ENSMUSG00000027884.17_108569297_108580180_1	chr3	+	441	5	ISM	ENSMUSG00000027884.17	ENST00000676454.1	1142	8	626	2083	626	-2083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACTATGAGCTCCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	108569296	108580180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108569350_108570839_108570948_108576014_108576156_108578217_108578312_108580135
ENSMUSG00000027884.17_108570893_108580652_1	chr3	+	444	5	ISM	ENSMUSG00000027884.17	ENST00000676454.1	1142	8	2222	1611	2222	-1611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGCAGGTGAATTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	108570892	108580652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108570948_108576014_108576156_108578217_108578312_108580135_108580234_108580596
ENSMUSG00000027884.17_108580595_108582264_1	chr3	+	461	2	ISM	ENSMUSG00000027884.17	ENST00000676454.1	1142	8	11924	-1	11924	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGTCCCCAGCGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	108580594	108582264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108580744_108581952
ENSMUSG00000027889.18_107981378_107993943_1	chr3	-	3514	17	NNC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	0	0	intron_retention	TRUE	canonical	NA	NA	NA	NA	1766	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	107993943	107981377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107986000_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107993533
ENSMUSG00000027889.18_107981378_107993943_2	chr3	-	3514	17	NNC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1781	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	107993943	107981377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987383_107987491_107987582_107987652_107987959_107988091_107993533
ENSMUSG00000027889.18_107981378_107993943_3	chr3	-	3514	17	NNC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	107993943	107981377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984775_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107993533
ENSMUSG00000027889.18_107981378_107993943_4	chr3	-	3519	17	FSM	ENSMUSG00000027889.18	ENST00000667949.2	3527	17	15	-7	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	107993943	107981377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107993533
ENSMUSG00000027889.18_107981904_107988450_1	chr3	-	2602	16	NNC	ENSMUSG00000027889.18	novel	2691	17	NA	NA	1433	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCACCGGGAACCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	107988450	107981903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107982438_107982846_107983021_107983286_107983404_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316
ENSMUSG00000027889.18_107981904_107988450_2	chr3	-	2606	16	ISM	ENSMUSG00000027889.18	ENST00000358729.9	2691	17	4200	0	1433	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCACCGGGAACCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	107988450	107981903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107982438_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316
ENSMUSG00000027889.18_107981904_107988450_3	chr3	-	2605	16	NNC	ENSMUSG00000027889.18	novel	2691	17	NA	NA	1433	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCACCGGGAACCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	107988450	107981903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107982438_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987960_107988091_107988316
ENSMUSG00000027889.18_107981904_107988450_4	chr3	-	2601	16	NNC	ENSMUSG00000027889.18	novel	2691	17	NA	NA	1433	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCACCGGGAACCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	107988450	107981903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107982438_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984775_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316
ENSMUSG00000027889.18_107981904_107988450_5	chr3	-	2604	16	NNC	ENSMUSG00000027889.18	novel	2691	17	NA	NA	1433	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCACCGGGAACCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	107988450	107981903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107982438_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987380_107987491_107987582_107987652_107987959_107988091_107988316
ENSMUSG00000027889.18_107982060_107992711_1	chr3	-	2596	17	FSM	ENSMUSG00000027889.18	ENST00000358729.9	2691	17	-61	156	3	130	multi-exon	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCATTATTGTCTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	107992711	107982059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_107982438_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107992562
ENSMUSG00000027893.15_107571656_107578532_1	chr3	-	1657	11	ISM	ENSMUSG00000027893.15	ENST00000359172.3	2426	17	12680	-108	12680	108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCTAGAAAAATACTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	107578532	107571655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453
ENSMUSG00000027893.15_107572335_107603565_1	chr3	-	1653	17	FSM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	311	1899	311	-571	multi-exon	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTGATTTTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	107603565	107572334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ENSMUSG00000027893.15_107572356_107579413_1	chr3	-	1041	12	ISM	ENSMUSG00000027893.15	ENST00000359172.3	2426	17	11799	592	11799	-592	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTCTTCTTATTACT	NA	NA	NA	NA	NA	NA	NA	NA	107579413	107572355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357
ENSMUSG00000027893.15_107572832_107580854_1	chr3	-	1109	12	ISM	ENSMUSG00000027893.15	ENST00000359172.3	2426	17	10358	1068	10358	-1068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAACTTGAAAGAAAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	107580854	107572831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751
ENSMUSG00000027893.15_107575566_107585147_1	chr3	-	1098	11	ISM	ENSMUSG00000027893.15	ENST00000359172.3	2426	17	6065	3802	6065	-3802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCTGCTCTCCACTAC	NA	NA	NA	NA	NA	NA	NA	NA	107585147	107575565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035
ENSMUSG00000027893.15_107576013_107590964_1	chr3	-	1019	11	ISM	ENSMUSG00000027893.15	ENST00000359172.3	2426	17	248	4249	248	-4249	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGTGGACGTTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	107590964	107576012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107590918
ENSMUSG00000027893.15_107576482_107591108_1	chr3	-	1049	10	ISM	ENSMUSG00000027893.15	ENST00000359172.3	2426	17	104	4718	104	-4718	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTCTCAAGGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	107591108	107576481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107590918
ENSMUSG00000027896.16_107198546_107208270_1	chr3	+	724	4	ISM	ENSMUSG00000027896.16	ENST00000437429.6	1472	6	16	11102	0	-6763	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCGAAGAGTTCAGCAATA	NA	NA	NA	NA	NA	NA	NA	NA	107198545	107208270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_107198737_107199723_107199842_107206435_107206598_107208017
ENSMUSG00000027896.16_107198546_107219431_1	chr3	+	1659	7	FSM	ENSMUSG00000027896.16	ENST00000541986.5	1616	7	16	-59	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATTTGATCGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	107198545	107219431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_107198737_107199723_107199842_107206151_107206296_107206435_107206598_107208017_107208537_107210376_107210456_107218985
ENSMUSG00000027896.16_107198631_107208319_1	chr3	+	688	4	ISM	ENSMUSG00000027896.16	ENST00000437429.6	1472	6	101	11053	0	-6714	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAATGGCAAAAGTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	107198630	107208319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_107198737_107199723_107199842_107206435_107206598_107208017
ENSMUSG00000027896.16_107198631_107208376_1	chr3	+	745	4	ISM	ENSMUSG00000027896.16	ENST00000437429.6	1472	6	101	10996	0	-6657	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATATCTCGCTCTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	107198630	107208376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_107198737_107199723_107199842_107206435_107206598_107208017
ENSMUSG00000027896.16_107199760_107208496_1	chr3	+	723	3	ISM	ENSMUSG00000027896.16	ENST00000437429.6	1472	6	1230	10876	-22	-6537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACGTAATGGATGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	107199759	107208496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_107199842_107206435_107206598_107208017
ENSMUSG00000027896.16_107199782_107219431_1	chr3	+	1536	7	NNC	ENSMUSG00000027896.16	novel	1484	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	3964	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATTTGATCGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	107199781	107219431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_107199842_107205260_107205394_107206151_107206296_107206435_107206598_107208017_107208530_107210376_107210456_107218985
ENSMUSG00000027896.16_107199782_107219431_2	chr3	+	1399	6	FSM	ENSMUSG00000027896.16	ENST00000472422.6	1340	6	0	-59	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATTTGATCGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	107199781	107219431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_107199842_107205260_107205394_107206435_107206598_107208017_107208537_107210376_107210456_107218985
ENSMUSG00000027896.16_107199782_107219431_3	chr3	+	1543	7	FSM	ENSMUSG00000027896.16	ENST00000369779.9	1484	7	0	-59	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATTTGATCGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	107199781	107219431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_107199842_107205260_107205394_107206151_107206296_107206435_107206598_107208017_107208537_107210376_107210456_107218985
ENSMUSG00000027896.16_107199818_107208539_1	chr3	+	708	3	ISM	ENSMUSG00000027896.16	ENST00000437429.6	1472	6	1288	10833	36	-6494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATGAACTTAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	107199817	107208539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_107199842_107206435_107206598_107208017
ENSMUSG00000027900.16_106455147_106481912_1	chr3	+	1944	9	FSM	ENSMUSG00000027900.16	ENSMUST00000067630.13	3271	9	33	1294	33	-249	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAATGTGATAATAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	106455146	106481912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_106455237_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ENSMUSG00000027900.16_106459470_106481854_1	chr3	+	1537	6	ISM	ENSMUSG00000027900.16	ENSMUST00000029507.13	1891	7	4282	307	4282	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGAAAAGTTATCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	106459469	106481854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106480288_106480382_106480890
ENSMUSG00000027900.16_106459502_106482032_1	chr3	+	1944	8	ISM	ENSMUSG00000027900.16	ENSMUST00000067630.13	3271	9	4388	1174	4314	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAGAAATTTATACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	106459501	106482032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ENSMUSG00000027900.16_106459547_106481994_1	chr3	+	1600	6	ISM	ENSMUSG00000027900.16	ENSMUST00000029507.13	1891	7	4359	167	4359	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATTACATTATAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	106459546	106481994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106480288_106480382_106480890
ENSMUSG00000027900.16_106459556_106482161_1	chr3	+	2019	8	ISM	ENSMUSG00000027900.16	ENSMUST00000067630.13	3271	9	4442	1045	4368	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTTGTCATGAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	106459555	106482161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ENSMUSG00000027900.16_106462581_106482161_1	chr3	+	1616	5	ISM	ENSMUSG00000027900.16	ENSMUST00000029507.13	1891	7	7393	0	7393	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTTGTCATGAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	106462580	106482161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_106462625_106469064_106469133_106473360_106473501_106480288_106480382_106480890
ENSMUSG00000027900.16_106473361_106482302_1	chr3	+	1906	5	ISM	ENSMUSG00000027900.16	ENSMUST00000121034.8	2035	8	18181	-141	18173	141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCACTTGGGAGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	106473360	106482302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ENSMUSG00000027900.16_106473401_106482374_1	chr3	+	1938	5	ISM	ENSMUSG00000027900.16	ENSMUST00000121034.8	2035	8	18221	-213	18213	213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAGCCAGGGCTATACAG	NA	NA	NA	NA	NA	NA	NA	NA	106473400	106482374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ENSMUSG00000027900.16_106473461_106482426_1	chr3	+	1930	5	ISM	ENSMUSG00000027900.16	ENSMUST00000121034.8	2035	8	18281	-265	18273	265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAGAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	106473460	106482426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ENSMUSG00000027900.16_106478091_106482566_1	chr3	+	1948	4	ISM	ENSMUSG00000027900.16	ENSMUST00000121034.8	2035	8	22911	-405	22903	405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGGAAAAGTTTAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	106478090	106482566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_106478187_106478926_106479010_106480288_106480382_106480890
ENSMUSG00000027900.16_106478929_106482673_1	chr3	+	1957	3	ISM	ENSMUSG00000027900.16	ENSMUST00000121034.8	2035	8	23749	-512	23741	512	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAGAAATAACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	106478928	106482673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_106479010_106480288_106480382_106480890
ENSMUSG00000027905.16_105586529_105587883_1	chr3	-	620	3	ISM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	7007	943	7007	-943	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTTAGAGAAACCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	105587883	105586528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105587029_105587659_105587762_105587865
ENSMUSG00000027905.16_105586791_105590227_1	chr3	-	623	6	ISM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	4663	1205	4663	-1205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGCCACTCAGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	105590227	105586790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192
ENSMUSG00000027905.16_105586936_105590525_1	chr3	-	639	7	ISM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	4365	1350	4365	-1350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGTCCCCCAAAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	105590525	105586935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468
ENSMUSG00000027905.16_105586936_105590542_1	chr3	-	656	7	ISM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	4348	1350	4348	-1350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGTCCCCCAAAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	105590542	105586935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468
ENSMUSG00000027905.16_105587718_105590788_1	chr3	-	631	7	ISM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	4102	2132	4102	-2132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATATGATGATGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	105590788	105587717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731
ENSMUSG00000027905.16_105588321_105591705_1	chr3	-	620	6	ISM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	3185	2735	3185	-2735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTCCTCATTTCTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	105591705	105588320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591600
ENSMUSG00000027905.16_105590292_105594495_1	chr3	-	618	6	ISM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	395	4706	395	-4706	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCATAAGATTTTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	105594495	105590291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105590332_105590468_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594439
ENSMUSG00000027905.16_105590748_105594760_1	chr3	-	684	4	ISM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	130	5162	130	-5162	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAGGAGCAAATAAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	105594760	105590747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105590847_105591600_105591770_105593954_105594050_105594439
ENSMUSG00000027907.5_93431357_93433456_1	chr3	+	302	2	NNC	ENSMUSG00000027907.5	novel	511	3	NA	NA	3562	-138	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAGTTCCCATCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	93431356	93433456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_93431507_93433304
ENSMUSG00000027907.5_93431357_93433456_2	chr3	+	308	2	ISM	ENSMUSG00000027907.5	ENSMUST00000029515.5	511	3	3562	138	3562	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAGTTCCCATCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	93431356	93433456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_93431507_93433298
ENSMUSG00000027907.5_93431426_93433594_1	chr3	+	377	2	ISM	ENSMUSG00000027907.5	ENSMUST00000029515.5	511	3	3631	0	3631	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7391	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAGAGTCAGTAGATT	NA	NA	NA	NA	NA	NA	NA	NA	93431425	93433594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_93431507_93433298
ENSMUSG00000027907.5_93431426_93433594_2	chr3	+	371	2	NNC	ENSMUSG00000027907.5	novel	511	3	NA	NA	3631	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6984	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAGAGTCAGTAGATT	NA	NA	NA	NA	NA	NA	NA	NA	93431425	93433594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_93431507_93433304
ENSMUSG00000027935.15_90128094_90133008_1	chr3	+	839	8	FSM	ENSMUSG00000027935.15	ENSMUST00000065418.7	1107	8	0	268	0	-268	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCGGCGAGGACGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	90128093	90133008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_90128330_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
ENSMUSG00000027935.15_90129543_90133278_1	chr3	+	874	7	ISM	ENSMUSG00000027935.15	ENSMUST00000065418.7	1107	8	1449	-2	1449	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCATTTGCATTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	90129542	90133278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
ENSMUSG00000027936.19_90161648_90170021_1	chr3	+	768	3	NNC	ENSMUSG00000027936.19	novel	1615	5	NA	NA	14	-1406	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATGCAAACTCATAG	NA	NA	NA	NA	NA	NA	NA	NA	90161647	90170021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_90161807_90168065_90168411_90169757
ENSMUSG00000027936.19_90161648_90170492_1	chr3	+	788	4	ISM	ENSMUSG00000027936.19	ENST00000368630.7	1615	5	14	935	14	-935	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGAGCCCATCAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	90161647	90170492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90161812_90168065_90168411_90169757_90170022_90170477
ENSMUSG00000027936.19_90161764_90170519_1	chr3	+	699	4	ISM	ENSMUSG00000027936.19	ENST00000368630.7	1615	5	130	908	130	-908	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATCCCCCTGCCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	90161763	90170519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90161812_90168065_90168411_90169757_90170022_90170477
ENSMUSG00000027936.19_90161766_90170534_1	chr3	+	707	4	NNC	ENSMUSG00000027936.19	novel	1615	5	NA	NA	132	-893	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGAAGGTCCTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	90161765	90170534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_90161807_90168065_90168411_90169757_90170022_90170477
ENSMUSG00000027936.19_90167496_90171114_1	chr3	+	1368	5	ISM	ENSMUSG00000027936.19	ENSMUST00000029545.15	2747	14	6026	318	5862	-313	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAGGATCCTAAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	90167495	90171114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
ENSMUSG00000027936.19_90168114_90170664_1	chr3	+	748	3	ISM	ENSMUSG00000027936.19	ENST00000368630.7	1615	5	6480	763	6480	-763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGAGTGTGGGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	90168113	90170664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90168411_90169757_90170022_90170477
ENSMUSG00000027936.19_90168301_90170965_1	chr3	+	740	4	ISM	ENSMUSG00000027936.19	ENST00000368630.7	1615	5	6667	462	6667	-462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGTGGAGGACTCATT	NA	NA	NA	NA	NA	NA	NA	NA	90168300	90170965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90168411_90169757_90170022_90170477_90170665_90170786
ENSMUSG00000027936.19_90169796_90171081_1	chr3	+	708	3	ISM	ENSMUSG00000027936.19	ENST00000368630.7	1615	5	8162	346	8162	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTCTGCCCCCAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	90169795	90171081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90170022_90170477_90170665_90170786
ENSMUSG00000027936.19_90170561_90171427_1	chr3	+	745	2	ISM	ENSMUSG00000027936.19	ENST00000368630.7	1615	5	8927	0	8927	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTGTGCTTGGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	90170560	90171427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90170665_90170786
ENSMUSG00000027937.16_90139273_90141309_1	chr3	+	276	4	ISM	ENSMUSG00000027937.16	ENSMUST00000119304.2	878	5	354	1542	354	-1542	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGTTGTTTCTCTACC	NA	NA	NA	NA	NA	NA	NA	NA	90139272	90141309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90139348_90139501_90139540_90139735_90139819_90141229
ENSMUSG00000027937.16_90139734_90142755_1	chr3	+	230	3	NNC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	815	-96	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTCGCCTGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	90139733	90142755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_90139819_90141229_90141310_90142690
ENSMUSG00000027940.19_89979958_90007715_1	chr3	+	1739	9	FSM	ENSMUSG00000027940.19	ENSMUST00000119570.8	2233	9	0	494	0	183	multi-exon	FALSE	canonical	NA	NA	NA	NA	3285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGGGAGACAGAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	89979957	90007715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89980158_89981026_89981153_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ENSMUSG00000027940.19_89979958_90007753_1	chr3	+	1777	9	FSM	ENSMUSG00000027940.19	ENSMUST00000119570.8	2233	9	0	456	0	221	multi-exon	FALSE	canonical	NA	NA	NA	NA	3426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATTTAGCCACATGAACA	NA	NA	NA	NA	NA	NA	NA	NA	89979957	90007753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89980158_89981026_89981153_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ENSMUSG00000027940.19_89981122_90007919_1	chr3	+	1648	8	ISM	ENSMUSG00000027940.19	ENSMUST00000119570.8	2233	9	1164	290	1137	-284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTTGTTTTTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	89981121	90007919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89981153_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ENSMUSG00000027940.19_89986847_89994879_1	chr3	+	576	3	ISM	ENSMUSG00000027940.19	ENSMUST00000119158.8	1090	8	-175	11211	0	-4558	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGCCTCTGCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	89986846	89994879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89987171_89993752_89993887_89994761
ENSMUSG00000027940.19_89987022_90007433_1	chr3	+	1359	9	FSM	ENSMUSG00000027940.19	ENST00000328159.9	1525	9	67	99	0	-99	multi-exon	FALSE	canonical	NA	NA	NA	NA	3538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCTGGGCTGTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	89987021	90007433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_89998319_89998399_90006834
ENSMUSG00000027940.19_89987022_90007433_2	chr3	+	1358	9	NNC	ENSMUSG00000027940.19	novel	1525	9	NA	NA	0	-99	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCTGGGCTGTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	89987021	90007433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_89998320_89998399_90006834
ENSMUSG00000027940.19_89987022_90008224_1	chr3	+	2000	9	FSM	ENSMUSG00000027940.19	ENST00000368533.8	2043	9	43	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAACGAGGTGCGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	89987021	90008224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834_90007542_90007612
ENSMUSG00000027940.19_89987123_90007433_1	chr3	+	1258	9	FSM	ENSMUSG00000027940.19	ENSMUST00000118566.8	2190	9	162	770	101	-99	multi-exon	FALSE	canonical	NA	NA	NA	NA	1366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCTGGGCTGTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	89987122	90007433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89996354_89996431_89997103_89997167_89997316_89997387_89998319_89998399_90006834
ENSMUSG00000027940.19_89987123_90007532_1	chr3	+	1357	9	FSM	ENSMUSG00000027940.19	ENST00000328159.9	1525	9	168	0	101	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAGACGTCTGAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	89987122	90007532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_89998319_89998399_90006834
ENSMUSG00000027940.19_89994979_90008224_1	chr3	+	1672	5	ISM	ENSMUSG00000027940.19	ENST00000368533.8	2043	9	8000	0	7957	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	5229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAACGAGGTGCGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	89994978	90008224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ENSMUSG00000027940.19_89994992_90007736_1	chr3	+	1250	6	ISM	ENSMUSG00000027940.19	ENSMUST00000118566.8	2190	9	8031	467	7970	204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATGTTTGTGCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	89994991	90007736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89995052_89996354_89996431_89997103_89997167_89997316_89997387_89998319_89998399_90006834
ENSMUSG00000027940.19_89995747_90007152_1	chr3	+	488	4	ISM	ENSMUSG00000027940.19	ENST00000368533.8	2043	9	8768	1072	8725	-380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCACAACGCAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	89995746	90007152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89995784_89997103_89997167_89997316_89997387_90006834
ENSMUSG00000027940.19_89996371_90006903_1	chr3	+	262	4	ISM	ENSMUSG00000027940.19	ENST00000330188.13	2046	9	9416	1300	9349	-629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACGAGATGTAGACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	89996370	90006903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89996431_89997103_89997167_89997316_89997387_90006834
ENSMUSG00000027942.18_89960211_89966424_1	chr3	+	1033	6	FSM	ENSMUSG00000027942.18	ENSMUST00000029552.13	1080	6	67	-20	33	20	multi-exon	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCATTGGTGGCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	89960210	89966424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048
ENSMUSG00000027942.18_89960211_89969148_1	chr3	+	861	6	FSM	ENSMUSG00000027942.18	ENST00000640799.1	823	6	-38	0	33	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACGTGCAGCCGTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	89960210	89969148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89968944
ENSMUSG00000027942.18_89960322_89968303_1	chr3	+	1240	7	FSM	ENSMUSG00000027942.18	ENSMUST00000162114.8	1411	7	173	-2	73	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGTTTGGGCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	89960321	89968303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89967668
ENSMUSG00000027942.18_89960322_89969148_1	chr3	+	653	5	FSM	ENSMUSG00000027942.18	ENST00000362076.8	726	5	73	0	73	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACGTGCAGCCGTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	89960321	89969148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89960427_89963513_89963632_89965791_89965959_89966048_89966108_89968944
ENSMUSG00000027942.18_89960322_89969148_2	chr3	+	651	5	NNC	ENSMUSG00000027942.18	novel	726	5	NA	NA	73	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACGTGCAGCCGTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	89960321	89969148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_89960427_89963515_89963632_89965791_89965959_89966048_89966108_89968944
ENSMUSG00000027942.18_89960322_89969749_1	chr3	+	1356	6	FSM	ENSMUSG00000027942.18	ENSMUST00000068798.13	1500	6	144	0	73	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGATCATTTCTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	89960321	89969749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89965791_89965959_89966048_89966108_89968944
ENSMUSG00000027944.14_89902753_89905927_1	chr3	-	1062	7	FSM	ENSMUSG00000027944.14	ENSMUST00000079724.9	1139	7	77	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGTTTTGTCAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	89905927	89902752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834
ENSMUSG00000027944.14_89902763_89905927_1	chr3	-	1052	7	FSM	ENSMUSG00000027944.14	ENSMUST00000079724.9	1139	7	77	10	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	89905927	89902762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834
ENSMUSG00000027952.17_89366425_89371755_1	chr3	+	564	3	ISM	ENSMUSG00000027952.17	ENSMUST00000029564.12	1194	5	0	4565	0	-4556	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGGGGCTCGGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	89366424	89371755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89366772_89369188_89369253_89371602
ENSMUSG00000027952.17_89366638_89375836_1	chr3	+	497	5	FSM	ENSMUSG00000027952.17	ENSMUST00000029564.12	1194	5	213	484	0	-475	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGTGTGGTCTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	89366637	89375836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89375820
ENSMUSG00000027952.17_89366638_89375878_1	chr3	+	539	5	FSM	ENSMUSG00000027952.17	ENSMUST00000029564.12	1194	5	213	442	0	-433	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAGAACCACGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	89366637	89375878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89375820
ENSMUSG00000027953.14_89175555_89177877_1	chr3	-	1015	6	NNC	ENSMUSG00000027953.14	novel	1022	6	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCAGAGTGATGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	89177877	89175554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177258_89177373_89177447_89177692
ENSMUSG00000027953.14_89175732_89177402_1	chr3	-	484	4	NNC	ENSMUSG00000027953.14	novel	535	4	NA	NA	46	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGCAATAGGTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	89177402	89175731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_89175906_89175979_89176094_89176356_89176519_89177368
ENSMUSG00000027953.14_89175732_89177425_1	chr3	-	513	4	FSM	ENSMUSG00000027953.14	ENST00000484157.5	535	4	23	-1	23	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGCAATAGGTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	89177425	89175731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177368
ENSMUSG00000027953.14_89175732_89177426_1	chr3	-	514	4	FSM	ENSMUSG00000027953.14	ENST00000484157.5	535	4	22	-1	22	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGCAATAGGTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	89177426	89175731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177368
ENSMUSG00000027955.17_79792238_79794320_1	chr3	+	1322	2	ISM	ENSMUSG00000027955.17	ENST00000296530.12	2280	5	77	54603	77	-54603	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCTTCTCAAGCAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	79792237	79794320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_79792534_79793294
ENSMUSG00000027955.17_79792387_79815941_1	chr3	+	1336	3	ISM	ENSMUSG00000027955.17	ENST00000296530.12	2280	5	226	32982	226	-32982	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGCAATGATAGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	79792386	79815941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_79792534_79793294_79794438_79815895
ENSMUSG00000027955.17_79792437_79815992_1	chr3	+	1337	3	ISM	ENSMUSG00000027955.17	ENST00000296530.12	2280	5	276	32931	276	-32931	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGGTTGCTAAAACAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	79792436	79815992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_79792534_79793294_79794438_79815895
ENSMUSG00000027955.17_79792483_79816048_1	chr3	+	1347	3	ISM	ENSMUSG00000027955.17	ENST00000296530.12	2280	5	322	32875	322	-32875	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGCACTGAAATCCATCAC	NA	NA	NA	NA	NA	NA	NA	NA	79792482	79816048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_79792534_79793294_79794438_79815895
ENSMUSG00000027955.17_79793363_79844028_1	chr3	+	1417	3	ISM	ENSMUSG00000027955.17	ENST00000296530.12	2280	5	1202	4895	126	-4895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAATGACCCAAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	79793362	79844028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_79794438_79815895_79816111_79843901
ENSMUSG00000027955.17_79793658_79844128_1	chr3	+	1222	3	ISM	ENSMUSG00000027955.17	ENST00000296530.12	2280	5	1497	4795	421	-4795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTTGTGTTCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	79793657	79844128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_79794438_79815895_79816111_79843901
ENSMUSG00000027955.17_79793951_79848923_1	chr3	+	1251	4	FSM	ENSMUSG00000027955.17	ENSMUST00000029567.9	6627	4	714	4662	714	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACGCAGTTTATATCATG	NA	NA	NA	NA	NA	NA	NA	NA	79793950	79848923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_79794438_79815895_79816111_79843901_79844129_79848601
ENSMUSG00000027957.14_116466341_116480835_1	chr3	-	1443	4	ISM	ENSMUSG00000027957.14	ENST00000640715.1	1800	6	7447	0	7447	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTAGTTTTGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	116480835	116466340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116467368_116471511_116471631_116474753_116474926_116480710
ENSMUSG00000027957.14_116466472_116480988_1	chr3	-	1379	5	ISM	ENSMUSG00000027957.14	ENST00000640715.1	1800	6	7294	131	7294	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGTGTGTCCTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	116480988	116466471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116467368_116471511_116471631_116474753_116474926_116480710_116480834_116480919
ENSMUSG00000027957.14_116466543_116481032_1	chr3	-	1352	5	ISM	ENSMUSG00000027957.14	ENST00000640715.1	1800	6	7250	202	7250	180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGTGGAGCTTACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	116481032	116466542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116467368_116471511_116471631_116474753_116474926_116480710_116480834_116480919
ENSMUSG00000027957.14_116466606_116481074_1	chr3	-	1331	5	ISM	ENSMUSG00000027957.14	ENST00000640715.1	1800	6	7208	265	7208	117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGCTTTGAGGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	116481074	116466605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116467368_116471511_116471631_116474753_116474926_116480710_116480834_116480919
ENSMUSG00000027957.14_116466802_116488283_1	chr3	-	1340	6	FSM	ENSMUSG00000027957.14	ENST00000640715.1	1800	6	-1	461	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTATCCAGGGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	116488283	116466801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_116467368_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078
ENSMUSG00000027957.14_116467151_116468956_1	chr3	-	354	2	ISM	ENSMUSG00000027957.14	ENSMUST00000120120.8	1791	9	36924	349	19326	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTGAAAACGTGTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	116468956	116467150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116467368_116468819
ENSMUSG00000027957.14_116467151_116471631_1	chr3	-	337	2	ISM	ENSMUSG00000027957.14	ENST00000639221.1	863	5	16651	-4	16651	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTGAAAACGTGTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	116471631	116467150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116467368_116471511
ENSMUSG00000027957.14_116467318_116474798_1	chr3	-	348	4	ISM	ENSMUSG00000027957.14	ENSMUST00000120120.8	1791	9	31082	516	13484	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACGATCCCAAACCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	116474798	116467317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753
ENSMUSG00000027957.14_116467318_116474928_1	chr3	-	344	3	ISM	ENSMUSG00000027957.14	ENST00000639221.1	863	5	13354	163	13354	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACGATCCCAAACCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	116474928	116467317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116467368_116471511_116471631_116474753
ENSMUSG00000027957.14_116468911_116480735_1	chr3	-	359	4	ISM	ENSMUSG00000027957.14	ENSMUST00000120120.8	1791	9	25145	2109	7547	-1756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACATTTTAAAAGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	116480735	116468910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116468954_116471511_116471631_116474753_116474926_116480710
ENSMUSG00000027957.14_116471562_116481001_1	chr3	-	323	3	ISM	ENSMUSG00000027957.14	ENST00000639221.1	863	5	7281	4407	7281	-4407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTTCAGGGATATAAT	NA	NA	NA	NA	NA	NA	NA	NA	116481001	116471561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116471631_116474753_116474926_116480919
ENSMUSG00000027957.14_116471579_116480957_1	chr3	-	385	4	ISM	ENSMUSG00000027957.14	ENST00000640715.1	1800	6	7325	5238	7325	-4424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGTCTCAAAGAATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	116480957	116471578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116471631_116474753_116474926_116480710_116480834_116480919
ENSMUSG00000027957.14_116471610_116481059_1	chr3	-	333	3	ISM	ENSMUSG00000027957.14	ENST00000639221.1	863	5	7223	4455	7223	-4455	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAATGGGTGTATACGTT	NA	NA	NA	NA	NA	NA	NA	NA	116481059	116471609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116471631_116474753_116474926_116480919
ENSMUSG00000027957.14_116474889_116488221_1	chr3	-	335	3	ISM	ENSMUSG00000027957.14	ENST00000639221.1	863	5	61	7734	61	-7734	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAACAGGCTCACAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	116488221	116474888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116474926_116480919_116481075_116488078
ENSMUSG00000027962.15_115903598_115914722_1	chr3	-	2220	5	ISM	ENSMUSG00000027962.15	ENST00000370119.8	2287	8	7735	-611	7735	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAATGAATTAAGAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	115914722	115903597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115904687_115908001_115908269_115909533_115909801_115910871_115911193_115914446
ENSMUSG00000027962.15_115904209_115918200_1	chr3	-	1778	6	ISM	ENSMUSG00000027962.15	ENST00000370119.8	2287	8	4257	0	4257	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGTCAGAACGTAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	115918200	115904208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115904687_115908001_115908269_115909533_115909801_115910871_115911193_115914446_115914723_115918031
ENSMUSG00000027962.15_115904315_115918238_1	chr3	-	1704	6	NNC	ENSMUSG00000027962.15	novel	2287	8	NA	NA	4219	-106	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACTGGAATGGTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	115918238	115904314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_115904681_115908001_115908269_115909533_115909801_115910871_115911193_115914446_115914723_115918031
ENSMUSG00000027962.15_115904481_115923106_1	chr3	-	2355	9	FSM	ENSMUSG00000027962.15	ENSMUST00000029574.13	3469	9	231	883	0	-272	multi-exon	FALSE	canonical	NA	NA	NA	NA	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTTAATACTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	115923106	115904480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_115904687_115908001_115908269_115909533_115909801_115910871_115911193_115914446_115914723_115918031_115918299_115919603_115919925_115922181_115922458_115922952
ENSMUSG00000027962.15_115904510_115919676_1	chr3	-	1372	6	ISM	ENSMUSG00000027962.15	ENST00000347652.6	2453	7	2781	557	2781	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAGAAGAGACATTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	115919676	115904509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115904687_115908001_115908269_115909533_115909801_115910871_115911193_115918031_115918299_115919603
ENSMUSG00000027962.15_115904538_115923106_1	chr3	-	2298	9	FSM	ENSMUSG00000027962.15	ENSMUST00000029574.13	3469	9	231	940	0	-329	multi-exon	FALSE	canonical	NA	NA	NA	NA	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAGTGTAGCTAACATC	NA	NA	NA	NA	NA	NA	NA	NA	115923106	115904537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_115904687_115908001_115908269_115909533_115909801_115910871_115911193_115914446_115914723_115918031_115918299_115919603_115919925_115922181_115922458_115922952
ENSMUSG00000027962.15_115904597_115919752_1	chr3	-	1361	6	ISM	ENSMUSG00000027962.15	ENST00000347652.6	2453	7	2705	644	2705	-388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTTGCAAGAAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	115919752	115904596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115904687_115908001_115908269_115909533_115909801_115910871_115911193_115918031_115918299_115919603
ENSMUSG00000027962.15_115904612_115923141_1	chr3	-	2259	9	FSM	ENSMUSG00000027962.15	ENSMUST00000029574.13	3469	9	196	1014	-35	-403	multi-exon	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCGGGATGATCGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	115923141	115904611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_115904687_115908001_115908269_115909533_115909801_115910871_115911193_115914446_115914723_115918031_115918299_115919603_115919925_115922181_115922458_115922952
ENSMUSG00000027962.15_115904645_115919818_1	chr3	-	1379	6	ISM	ENSMUSG00000027962.15	ENST00000347652.6	2453	7	2639	692	2639	-436	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTACTGCGCATCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	115919818	115904644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115904687_115908001_115908269_115909533_115909801_115910871_115911193_115918031_115918299_115919603
ENSMUSG00000027962.15_115908001_115919924_1	chr3	-	1444	5	ISM	ENSMUSG00000027962.15	ENST00000347652.6	2453	7	2533	4048	2533	-3792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTTTCTGTGTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	115919924	115908000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115908269_115909533_115909801_115910871_115911193_115918031_115918299_115919603
ENSMUSG00000027962.15_115908001_115922457_1	chr3	-	1810	7	ISM	ENSMUSG00000027962.15	ENST00000370119.8	2287	8	0	3792	0	-3792	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTTTCTGTGTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	115922457	115908000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115908269_115909533_115909801_115910871_115911193_115914446_115914723_115918031_115918299_115919603_115919925_115922367
ENSMUSG00000027962.15_115908052_115923337_1	chr3	-	2330	8	ISM	ENSMUSG00000027962.15	ENSMUST00000029574.13	3469	9	0	4454	0	-3843	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACTGAAGTTGGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	115923337	115908051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115908269_115909533_115909801_115910871_115911193_115914446_115914723_115918031_115918299_115919603_115919925_115922181_115922458_115922952
ENSMUSG00000027962.15_115908143_115922241_1	chr3	-	1362	6	ISM	ENSMUSG00000027962.15	ENST00000347652.6	2453	7	216	4190	216	-3934	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGGAGACATGGTATTA	NA	NA	NA	NA	NA	NA	NA	NA	115922241	115908142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115908269_115909533_115909801_115910871_115911193_115918031_115918299_115919603_115919925_115922181
ENSMUSG00000027962.15_115908194_115922295_1	chr3	-	1365	6	ISM	ENSMUSG00000027962.15	ENST00000347652.6	2453	7	162	4241	162	-3985	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTGTGGAAATGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	115922295	115908193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115908269_115909533_115909801_115910871_115911193_115918031_115918299_115919603_115919925_115922181
ENSMUSG00000027962.15_115915929_115922278_1	chr3	-	2199	4	ISM	ENSMUSG00000027962.15	ENSMUST00000196449.5	2532	5	828	0	179	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCTTTTTTCTCATTAA	NA	NA	NA	NA	NA	NA	NA	NA	115922278	115915928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115917443_115918031_115918299_115919603_115919925_115922181
ENSMUSG00000027962.15_115916057_115922356_1	chr3	-	2149	4	ISM	ENSMUSG00000027962.15	ENSMUST00000196449.5	2532	5	750	128	101	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGATAATGCATCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	115922356	115916056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115917443_115918031_115918299_115919603_115919925_115922181
ENSMUSG00000027962.15_115916118_115922399_1	chr3	-	2131	4	ISM	ENSMUSG00000027962.15	ENSMUST00000196449.5	2532	5	707	189	58	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGACACTTGAATGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	115922399	115916117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115917443_115918031_115918299_115919603_115919925_115922181
ENSMUSG00000027962.15_115916220_115923106_1	chr3	-	2241	5	FSM	ENSMUSG00000027962.15	ENSMUST00000196449.5	2532	5	0	291	0	-291	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTCCCAGGAATTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	115923106	115916219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_115917443_115918031_115918299_115919603_115919925_115922181_115922458_115922952
ENSMUSG00000027962.15_115916278_115923106_1	chr3	-	2183	5	FSM	ENSMUSG00000027962.15	ENSMUST00000196449.5	2532	5	0	349	0	-349	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGAACACTCTAGTGACG	NA	NA	NA	NA	NA	NA	NA	NA	115923106	115916277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_115917443_115918031_115918299_115919603_115919925_115922181_115922458_115922952
ENSMUSG00000027963.15_115802003_115818032_1	chr3	+	636	3	ISM	ENSMUSG00000027963.15	ENSMUST00000106502.2	2840	5	134	4577	134	-4577	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAAATGAGAAACCGA	NA	NA	NA	NA	NA	NA	NA	NA	115802002	115818032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_115802187_115804270_115804346_115817655
ENSMUSG00000027966.21_113824283_113860170_1	chr3	+	862	4	ISM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	22	152370	22	-152370	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGGAATCATGGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	113824282	113860170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113824653_113849243_113849412_113855012_113855227_113860060
ENSMUSG00000027966.21_113824579_113888572_1	chr3	+	808	6	ISM	ENSMUSG00000027966.21	ENST00000358392.6	7240	67	318	125404	318	-123968	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTTCACATCCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	113824578	113888572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113824653_113849243_113849412_113855012_113855227_113860060_113860224_113883780_113883907_113888509
ENSMUSG00000027966.21_113849341_113888906_1	chr3	+	784	6	ISM	ENSMUSG00000027966.21	ENST00000358392.6	7240	67	25080	125070	25080	-123634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGACTCCTAGGCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	113849340	113888906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113849412_113855012_113855227_113860060_113860224_113883780_113883907_113888509_113888663_113888849
ENSMUSG00000027966.21_113855038_113890721_1	chr3	+	797	6	ISM	ENSMUSG00000027966.21	ENST00000358392.6	7240	67	30777	123255	30777	-121819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGGATATTCTGTACGGG	NA	NA	NA	NA	NA	NA	NA	NA	113855037	113890721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113855227_113860060_113860224_113883780_113883907_113888509_113888663_113888849_113888943_113890648
ENSMUSG00000027966.21_113855106_113890788_1	chr3	+	796	6	ISM	ENSMUSG00000027966.21	ENST00000358392.6	7240	67	30845	123188	30845	-121752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGTGAATATGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	113855105	113890788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113855227_113860060_113860224_113883780_113883907_113888509_113888663_113888849_113888943_113890648
ENSMUSG00000027966.21_113860115_113891532_1	chr3	+	793	6	ISM	ENSMUSG00000027966.21	ENST00000358392.6	7240	67	35854	122444	35854	-121008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCCGTAAGTGCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	113860114	113891532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113860224_113883780_113883907_113888509_113888663_113888849_113888943_113890648_113890904_113891475
ENSMUSG00000027966.21_113883842_113895106_1	chr3	+	753	8	ISM	ENSMUSG00000027966.21	ENST00000358392.6	7240	67	59581	118870	59581	-117434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTACCAGGGGCTGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	113883841	113895106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113883907_113888509_113888663_113888849_113888943_113890648_113890904_113891475_113891539_113892724_113892767_113893439_113893503_113895087
ENSMUSG00000027966.21_113888511_113896221_1	chr3	+	781	8	ISM	ENSMUSG00000027966.21	ENST00000358392.6	7240	67	64250	117755	64250	-116319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGCACAGGAAGCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	113888510	113896221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113888663_113888849_113888943_113890648_113890904_113891475_113891539_113892724_113892767_113893439_113893503_113895087_113895163_113896183
ENSMUSG00000027966.21_113890768_113907245_1	chr3	+	782	12	ISM	ENSMUSG00000027966.21	ENST00000353414.8	7086	66	66507	106730	66507	-105295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAGGGTATATTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	113890767	113907245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113890904_113891475_113891539_113892724_113892767_113893439_113893503_113895087_113895163_113896183_113896268_113899038_113899096_113901929_113901984_113905683_113905738_113905853_113905908_113906066_113906121_113907199
ENSMUSG00000027966.21_113891476_113909179_1	chr3	+	798	14	ISM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	67215	103361	67215	-103361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTAGTCAATATCTATA	NA	NA	NA	NA	NA	NA	NA	NA	113891475	113909179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113891539_113892724_113892767_113893439_113893503_113895087_113895163_113896183_113896268_113899038_113899096_113901929_113901984_113905683_113905738_113905853_113905908_113906066_113906121_113907199_113907254_113907366_113907412_113908582_113908637_113909134
ENSMUSG00000027966.21_113925280_113951819_1	chr3	+	788	13	ISM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	101019	60721	101019	-60721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGGAGAAAAAGGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	113925279	113951819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113925316_113926784_113926839_113932048_113932103_113932226_113932272_113932392_113932447_113932569_113932615_113936692_113936747_113941418_113941473_113945023_113945078_113946257_113946366_113946747_113946838_113947289_113947344_113951733
ENSMUSG00000027966.21_113932047_113958105_1	chr3	+	830	12	ISM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	107786	54435	107786	-54435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGTTATTGTTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	113932046	113958105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113932103_113932226_113932272_113932392_113932447_113932569_113932615_113936692_113936747_113941418_113941473_113945023_113945078_113946257_113946366_113946747_113946838_113947289_113947344_113951733_113951842_113957997
ENSMUSG00000027966.21_113946256_113975044_1	chr3	+	794	10	ISM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	121995	37496	121995	-37496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCACTGTGAACTATAT	NA	NA	NA	NA	NA	NA	NA	NA	113946255	113975044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113946366_113946747_113946838_113947289_113947344_113951733_113951842_113957997_113958106_113958884_113958939_113960625_113960680_113961130_113961239_113966998_113967053_113974990
ENSMUSG00000027966.21_113960647_113987829_1	chr3	+	789	12	ISM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	136386	24711	136386	-24711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCATTTCTGCTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	113960646	113987829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113960680_113961130_113961239_113966998_113967053_113974990_113975045_113976261_113976316_113978506_113978561_113979144_113979253_113979530_113979585_113980176_113980231_113981346_113981401_113987536_113987591_113987721
ENSMUSG00000027966.21_113961193_113998508_1	chr3	+	784	13	ISM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	136932	14032	136932	-14032	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCCAAGGGTGAAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	113961192	113998508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113961239_113966998_113967053_113974990_113975045_113976261_113976316_113978506_113978561_113979144_113979253_113979530_113979585_113980176_113980231_113981346_113981401_113987536_113987591_113987721_113987830_113988378_113988433_113998472
ENSMUSG00000027966.21_113974990_113999510_1	chr3	+	786	12	ISM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	150729	13030	150729	-13030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCCAGGAGCCAAAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	113974989	113999510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113975045_113976261_113976316_113978506_113978561_113979144_113979253_113979530_113979585_113980176_113980231_113981346_113981401_113987536_113987591_113987721_113987830_113988378_113988433_113998472_113998527_113999427
ENSMUSG00000027966.21_113980177_114001873_1	chr3	+	744	11	ISM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	155916	10667	155916	-10667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGGAGGAGATATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	113980176	114001873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113980231_113981346_113981401_113987536_113987591_113987721_113987830_113988378_113988433_113998472_113998527_113999427_113999536_114000016_114000071_114000173_114000210_114000302_114000357_114001759
ENSMUSG00000027966.21_113987742_114005808_1	chr3	+	785	9	ISM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	163481	6732	163481	-6732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATCCGGATAAAAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	113987741	114005808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113987830_113988378_113988433_113998472_113998527_113999427_113999536_114000016_114000071_114000173_114000210_114000302_114000357_114001759_114002010_114005721
ENSMUSG00000027966.21_113988384_114006930_1	chr3	+	782	9	ISM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	164123	5610	164123	-5610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTATGTTGCTACCTC	NA	NA	NA	NA	NA	NA	NA	NA	113988383	114006930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113988433_113998472_113998527_113999427_113999536_114000016_114000071_114000173_114000210_114000302_114000357_114001759_114002010_114005721_114005835_114006866
ENSMUSG00000027966.21_113999461_114010751_1	chr3	+	783	8	ISM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	175200	1789	175200	-1789	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGAAGTTATGACAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	113999460	114010751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_113999536_114000016_114000071_114000173_114000210_114000302_114000357_114001759_114002010_114005721_114005835_114006866_114006936_114010619
ENSMUSG00000027966.21_114001948_114012634_1	chr3	+	783	5	ISM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	177687	-94	177687	94	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGTTATGACGATGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	114001947	114012634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_114002010_114005721_114005835_114006866_114006936_114010619_114010854_114012329
ENSMUSG00000027966.21_114005773_114012743_1	chr3	+	779	4	ISM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	181512	-203	181512	203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAGAGAGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	114005772	114012743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_114005835_114006866_114006936_114010619_114010854_114012329
ENSMUSG00000027966.21_114010650_114012966_1	chr3	+	841	2	ISM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	186389	-426	186389	426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCAAGTTGTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	114010649	114012966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_114010854_114012329
ENSMUSG00000027966.21_114010701_114013003_1	chr3	+	827	2	ISM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	186440	-463	186440	463	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCTTGATTAATAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	114010700	114013003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_114010854_114012329
ENSMUSG00000027968.12_127330363_127337862_1	chr3	-	758	5	ISM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	9136	0	3305	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTTTTATTTACA	NA	NA	NA	NA	NA	NA	NA	NA	127337862	127330362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802
ENSMUSG00000027968.12_127330363_127341197_1	chr3	-	1977	12	NNC	ENSMUSG00000027968.12	novel	1981	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTTTTATTTACA	NA	NA	NA	NA	NA	NA	NA	NA	127341197	127330362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337775_127337928_127339480_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010
ENSMUSG00000027968.12_127330363_127341197_2	chr3	-	1983	12	FSM	ENSMUSG00000027968.12	ENST00000344442.10	1981	12	0	-2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTTTTATTTACA	NA	NA	NA	NA	NA	NA	NA	NA	127341197	127330362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337775_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010
ENSMUSG00000027968.12_127330363_127341197_3	chr3	-	1977	12	NNC	ENSMUSG00000027968.12	novel	1981	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3980	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTTTTATTTACA	NA	NA	NA	NA	NA	NA	NA	NA	127341197	127330362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337775_127337928_127339474_127339614_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010
ENSMUSG00000027968.12_127330363_127341197_4	chr3	-	1978	12	NNC	ENSMUSG00000027968.12	novel	1981	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTTTTATTTACA	NA	NA	NA	NA	NA	NA	NA	NA	127341197	127330362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337775_127337928_127339474_127339620_127339695_127340048_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010
ENSMUSG00000027968.12_127330363_127341197_5	chr3	-	1977	12	NNC	ENSMUSG00000027968.12	novel	1981	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4866	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTTTTATTTACA	NA	NA	NA	NA	NA	NA	NA	NA	127341197	127330362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336686_127336806_127337775_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010
ENSMUSG00000027968.12_127330555_127339540_1	chr3	-	697	6	ISM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	7458	192	1627	48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCCTCATGACTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	127339540	127330554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474
ENSMUSG00000027968.12_127330603_127340839_1	chr3	-	1553	11	NNC	ENSMUSG00000027968.12	novel	1713	12	NA	NA	328	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGACGACTTTTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	127340839	127330602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337775_127337928_127339474_127339620_127339695_127340050_127340124_127340219_127340302_127340468_127340569_127340654_127340738
ENSMUSG00000027968.12_127334190_127341186_1	chr3	-	1654	11	NNC	ENSMUSG00000027968.12	novel	1984	12	NA	NA	10	-3587	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAATGGTTATATGCATC	NA	NA	NA	NA	NA	NA	NA	NA	127341186	127334189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_127334286_127334447_127334608_127336680_127336806_127337775_127337928_127339474_127339620_127339696_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010
ENSMUSG00000027968.12_127334447_127341186_1	chr3	-	1557	10	NNC	ENSMUSG00000027968.12	novel	1984	12	NA	NA	10	-3844	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCTGATTGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	127341186	127334446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_127334608_127336680_127336806_127337775_127337928_127339474_127339620_127339695_127340050_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010
ENSMUSG00000027968.12_127334504_127339925_1	chr3	-	729	5	ISM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	7073	4141	1242	-3901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGCACAGACTGAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	127339925	127334503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695
ENSMUSG00000027968.12_127334571_127339959_1	chr3	-	696	5	ISM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	7039	4208	1208	-3968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCTAGAAGGAGATACT	NA	NA	NA	NA	NA	NA	NA	NA	127339959	127334570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695
ENSMUSG00000027983.14_131086937_131096703_1	chr3	-	1570	4	FSM	ENSMUSG00000027983.14	ENSMUST00000200236.2	1716	4	146	0	146	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCTATGGACAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	131096703	131086936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_131087334_131089036_131089199_131091434_131092071_131096328
ENSMUSG00000027984.9_131027068_131065750_1	chr3	-	1783	8	NNC	ENSMUSG00000027984.9	novel	1789	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCCTGTCTTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	131065750	131027067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131038814_131038936_131042064_131042223_131043451_131043581_131065524
ENSMUSG00000027984.9_131027826_131065673_1	chr3	-	540	5	FSM	ENSMUSG00000027984.9	ENST00000638621.1	531	5	-17	8	-17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGACACTTCCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	131065673	131027825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131065524
ENSMUSG00000027985.15_130906446_130986901_1	chr3	+	573	6	ISM	ENSMUSG00000027985.15	ENST00000510624.5	1422	11	381	29931	0	-29931	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGAGCCGAGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	130906445	130986901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_130906470_130907504_130907572_130909061_130909196_130978291_130978425_130982983_130983075_130986777
ENSMUSG00000027985.15_130907505_130988297_1	chr3	+	572	6	ISM	ENSMUSG00000027985.15	ENST00000510624.5	1422	11	1440	28535	1059	-28535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGCAGGAGCCCAAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	130907504	130988297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_130907572_130909061_130909196_130978291_130978425_130982983_130983075_130986777_130986901_130988273
ENSMUSG00000027985.15_130909138_130988436_1	chr3	+	568	5	ISM	ENSMUSG00000027985.15	ENST00000510624.5	1422	11	3073	28396	2692	-28396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAACGGTGCGCACGT	NA	NA	NA	NA	NA	NA	NA	NA	130909137	130988436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_130909196_130978291_130978425_130982983_130983075_130986777_130986901_130988273
ENSMUSG00000027985.15_130978292_130994051_1	chr3	+	618	5	ISM	ENSMUSG00000027985.15	ENST00000510624.5	1422	11	72227	22781	71846	-22781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGTCCTCTTTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	130978291	130994051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_130978425_130982983_130983075_130986777_130986901_130988273_130988437_130993943
ENSMUSG00000027985.15_130983022_131016769_1	chr3	+	582	7	ISM	ENSMUSG00000027985.15	ENST00000510624.5	1422	11	76957	63	76576	-63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGGCCCTCTTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	130983021	131016769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_130983075_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_130998581_130998623_131016724
ENSMUSG00000027993.17_84078712_84099568_1	chr3	-	1472	6	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	20577	8068	20577	0	internal_fragment	TRUE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGTTGTAAATAATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	84099568	84078711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387
ENSMUSG00000027993.17_84078792_84100560_1	chr3	-	1425	7	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	19585	8148	19585	-80	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTCCATAATCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	84100560	84078791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527
ENSMUSG00000027993.17_84080070_84100679_1	chr3	-	1500	6	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	19466	9426	19466	-1358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCGATGGTAATATGTG	NA	NA	NA	NA	NA	NA	NA	NA	84100679	84080069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527
ENSMUSG00000027993.17_84080203_84115543_1	chr3	-	1430	7	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	4602	9559	4602	-1491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTGTGGACCGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	84115543	84080202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480
ENSMUSG00000027993.17_84085422_84178098_1	chr3	-	1517	6	ISM	ENSMUSG00000027993.17	ENST00000433687.2	1977	9	-43	6710	0	-6710	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATATTAATTGCAGATA	NA	NA	NA	NA	NA	NA	NA	NA	84178098	84085421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84177940
ENSMUSG00000027994.15_129708631_129763725_1	chr3	-	1166	8	FSM	ENSMUSG00000027994.15	ENSMUST00000029624.15	1318	8	130	22	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATTCATTGACAACCG	NA	NA	NA	NA	NA	NA	NA	NA	129763725	129708630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_129708836_129709351_129709469_129710587_129710792_129712234_129712396_129720013_129720119_129727231_129727403_129728273_129728350_129763598
ENSMUSG00000027994.15_129708631_129763725_2	chr3	-	1159	8	NNC	ENSMUSG00000027994.15	novel	1318	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATTCATTGACAACCG	NA	NA	NA	NA	NA	NA	NA	NA	129763725	129708630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_129708829_129709351_129709469_129710587_129710792_129712234_129712396_129720013_129720119_129727231_129727403_129728273_129728350_129763598
ENSMUSG00000027994.15_129708631_129763725_3	chr3	-	1159	8	NNC	ENSMUSG00000027994.15	novel	1318	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATTCATTGACAACCG	NA	NA	NA	NA	NA	NA	NA	NA	129763725	129708630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_129708836_129709351_129709469_129710587_129710792_129712234_129712396_129720013_129720112_129727231_129727403_129728273_129728350_129763598
ENSMUSG00000027994.15_129708774_129763725_1	chr3	-	1023	8	FSM	ENSMUSG00000027994.15	ENSMUST00000029624.15	1318	8	130	165	0	-143	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCGAGAAGAACTAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	129763725	129708773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_129708836_129709351_129709469_129710587_129710792_129712234_129712396_129720013_129720119_129727231_129727403_129728273_129728350_129763598
ENSMUSG00000027994.15_129709351_129763855_1	chr3	-	1092	7	ISM	ENSMUSG00000027994.15	ENSMUST00000029624.15	1318	8	0	742	0	-720	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTTACTGAGAGCACATA	NA	NA	NA	NA	NA	NA	NA	NA	129763855	129709350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129709469_129710587_129710792_129712234_129712396_129720013_129720119_129727231_129727403_129728273_129728350_129763598
ENSMUSG00000027996.14_83673872_83681623_1	chr3	+	1759	3	FSM	ENSMUSG00000027996.14	ENSMUST00000029625.8	2003	3	244	0	244	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTCTGTCATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	83673871	83681623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_83674351_83676632_83676714_83680424
ENSMUSG00000027997.10_129695107_129707143_1	chr3	+	814	7	FSM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	33	609	33	-609	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCGGCAAGAAGCAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	129695106	129707143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_129695156_129699114_129699157_129699551_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
ENSMUSG00000027997.10_129699113_129707250_1	chr3	+	874	6	ISM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	4039	502	4039	-502	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACATTTCCCTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	129699112	129707250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_129699157_129699551_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
ENSMUSG00000027997.10_129700057_129707403_1	chr3	+	826	4	ISM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	4983	349	4983	-349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAGGAAATTACTATGCA	NA	NA	NA	NA	NA	NA	NA	NA	129700056	129707403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_129700127_129704171_129704348_129705766_129705924_129706980
ENSMUSG00000027997.10_129704320_129707628_1	chr3	+	833	3	ISM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	9246	124	9246	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATAGTGGGCCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	129704319	129707628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_129704348_129705766_129705924_129706980
ENSMUSG00000027998.12_82964076_82978690_1	chr3	+	1445	12	ISM	ENSMUSG00000027998.12	ENST00000302078.9	1504	13	0	786	0	-786	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTCTTAGTGTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	82964075	82978690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_82964185_82965962_82966106_82967119_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496
ENSMUSG00000027998.12_82964076_82979662_1	chr3	+	1714	14	NNC	ENSMUSG00000027998.12	novel	1851	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1036	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGCATGTTGAGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	82964075	82979662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_82964185_82965962_82966106_82966639_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
ENSMUSG00000027998.12_82964076_82979662_2	chr3	+	1720	14	ISM	ENSMUSG00000027998.12	ENSMUST00000150268.8	1851	15	1247	0	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGCATGTTGAGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	82964075	82979662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
ENSMUSG00000027998.12_82964076_82979662_3	chr3	+	1712	14	NNC	ENSMUSG00000027998.12	novel	1851	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	885	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGCATGTTGAGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	82964075	82979662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973993_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
ENSMUSG00000027998.12_82965961_82979479_1	chr3	+	1400	12	ISM	ENSMUSG00000027998.12	ENST00000302078.9	1504	13	1885	-3	1885	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCATGGCTGTCCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	82965960	82979479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_82966106_82967119_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
ENSMUSG00000027999.16_129672255_129688588_1	chr3	+	675	4	FSM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	0	886	0	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAGATCTATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	129672254	129688588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129688486
ENSMUSG00000027999.16_129682553_129688884_1	chr3	+	618	3	ISM	ENSMUSG00000027999.16	ENSMUST00000061165.9	476	4	7720	-278	7720	278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTGACTTGGTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	129682552	129688884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_129682607_129683916_129684083_129688486
ENSMUSG00000027999.16_129683974_129688989_1	chr3	+	612	2	ISM	ENSMUSG00000027999.16	ENSMUST00000061165.9	476	4	9141	-383	9141	383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTCCCTTAGAACTATT	NA	NA	NA	NA	NA	NA	NA	NA	129683973	129688989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_129684083_129688486
ENSMUSG00000027999.16_129684021_129689055_1	chr3	+	631	2	ISM	ENSMUSG00000027999.16	ENSMUST00000061165.9	476	4	9188	-449	9188	-419	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTCCATTTTTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	129684020	129689055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_129684083_129688486
ENSMUSG00000028005.14_81939872_81941648_1	chr3	-	747	2	ISM	ENSMUSG00000028005.14	ENST00000652626.1	3148	13	39731	523	39731	-520	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAATTTGTACTGAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	81941648	81939871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81940589_81941618
ENSMUSG00000028005.14_81939914_81941709_1	chr3	-	766	2	ISM	ENSMUSG00000028005.14	ENST00000652626.1	3148	13	39670	565	39670	-562	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATTTTATGCCAATTACA	NA	NA	NA	NA	NA	NA	NA	NA	81941709	81939913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81940589_81941618
ENSMUSG00000028005.14_81940038_81942113_1	chr3	-	743	3	ISM	ENSMUSG00000028005.14	ENST00000652626.1	3148	13	39266	689	39266	-686	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAATTTATTTGTAGACT	NA	NA	NA	NA	NA	NA	NA	NA	81942113	81940037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81940589_81941618_81941746_81942048
ENSMUSG00000028005.14_81940166_81942634_1	chr3	-	753	4	ISM	ENSMUSG00000028005.14	ENST00000652626.1	3148	13	38745	817	38745	-814	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTATATGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	81942634	81940165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81940589_81941618_81941746_81942048_81942204_81942586
ENSMUSG00000028005.14_81940319_81945325_1	chr3	-	795	5	ISM	ENSMUSG00000028005.14	ENST00000652626.1	3148	13	36054	970	36054	-967	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTTAAATTCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	81945325	81940318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81940589_81941618_81941746_81942048_81942204_81942586_81942728_81945223
ENSMUSG00000028005.14_81940390_81945358_1	chr3	-	757	5	ISM	ENSMUSG00000028005.14	ENST00000652626.1	3148	13	36021	1041	36021	-1038	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTCGATTACTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	81945358	81940389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81940589_81941618_81941746_81942048_81942204_81942586_81942728_81945223
ENSMUSG00000028005.14_81940469_81945415_1	chr3	-	735	5	ISM	ENSMUSG00000028005.14	ENST00000652626.1	3148	13	35964	1120	35964	-1117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTACTTCGTGTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	81945415	81940468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81940589_81941618_81941746_81942048_81942204_81942586_81942728_81945223
ENSMUSG00000028005.14_81940558_81947106_1	chr3	-	766	6	ISM	ENSMUSG00000028005.14	ENST00000652626.1	3148	13	34273	1209	34273	1060	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGTTGTGGAACAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	81947106	81940557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81940589_81941618_81941746_81942048_81942204_81942586_81942728_81945223_81945462_81947032
ENSMUSG00000028005.14_81941618_81952894_3	chr3	-	1201	8	ISM	ENSMUSG00000028005.14	ENST00000503520.5	1736	12	28485	0	28485	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCTCATTAGAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	81952894	81941617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81941746_81942048_81942204_81942586_81942728_81945223_81945363_81947032_81947231_81950426_81950561_81951435_81951553_81952705
ENSMUSG00000028005.14_81941618_81953836_1	chr3	-	1260	9	ISM	ENSMUSG00000028005.14	ENST00000503520.5	1736	12	27543	0	27543	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCTCATTAGAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	81953836	81941617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81941746_81942048_81942204_81942586_81942728_81945223_81945363_81947032_81947231_81950426_81950561_81951435_81951553_81952705_81952937_81953819
ENSMUSG00000028005.14_81942097_81950510_1	chr3	-	768	5	ISM	ENSMUSG00000028005.14	ENST00000652626.1	3148	13	30869	2748	30869	-479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCACAGGAGAAAAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	81950510	81942096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81942204_81942586_81942728_81945223_81945462_81947032_81947231_81950426
ENSMUSG00000028005.14_81942097_81953933_1	chr3	-	1181	8	ISM	ENSMUSG00000028005.14	ENST00000503520.5	1736	12	27446	479	27446	-479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCACAGGAGAAAAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	81953933	81942096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81942204_81942586_81942728_81945223_81945363_81947032_81947231_81950426_81950561_81951435_81951553_81952705_81952937_81953819
ENSMUSG00000028005.14_81942164_81950560_1	chr3	-	751	5	ISM	ENSMUSG00000028005.14	ENST00000652626.1	3148	13	30819	2815	30819	-546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGGACAGCGGATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	81950560	81942163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81942204_81942586_81942728_81945223_81945462_81947032_81947231_81950426
ENSMUSG00000028005.14_81942587_81965666_1	chr3	-	1277	8	ISM	ENSMUSG00000028005.14	ENST00000503520.5	1736	12	15713	969	15713	-969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAGTAAATAAATGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	81965666	81942586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81942728_81945223_81945363_81947032_81947231_81950426_81950561_81951435_81951553_81952705_81952937_81953819_81954018_81965547
ENSMUSG00000028005.14_81942616_81951513_1	chr3	-	760	5	ISM	ENSMUSG00000028005.14	ENST00000652626.1	3148	13	29866	3267	29866	-998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTCAAGTAGATGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	81951513	81942615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81942728_81945223_81945462_81947032_81947231_81950426_81950561_81951435
ENSMUSG00000028005.14_81942691_81951552_1	chr3	-	724	5	ISM	ENSMUSG00000028005.14	ENST00000652626.1	3148	13	29827	3342	29827	-1073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCCAGAACCTTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	81951552	81942690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81942728_81945223_81945462_81947032_81947231_81950426_81950561_81951435
ENSMUSG00000028005.14_81945295_81981355_1	chr3	-	1217	9	ISM	ENSMUSG00000028005.14	ENST00000503520.5	1736	12	24	3677	24	-3677	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCCTCAACGATCTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	81981355	81945294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81945363_81947032_81947231_81950426_81950561_81951435_81951553_81952705_81952937_81953819_81954018_81965547_81965667_81968326_81968428_81981304
ENSMUSG00000028005.14_81945297_81952894_1	chr3	-	803	5	ISM	ENSMUSG00000028005.14	ENST00000652626.1	3148	13	28485	5948	28485	-3679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTCCTCAACGATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	81952894	81945296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81945462_81947032_81947231_81950426_81950561_81951435_81951553_81952705
ENSMUSG00000028005.14_81952728_81981340_1	chr3	-	737	5	ISM	ENSMUSG00000028005.14	ENST00000652626.1	3148	13	39	13379	39	-11110	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTACAGAGTGCTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	81981340	81952727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_81952937_81953819_81954018_81965547_81965667_81968326_81968477_81981279
ENSMUSG00000028007.14_117575296_117632633_1	chr3	-	1534	6	ISM	ENSMUSG00000028007.14	ENSMUST00000198499.5	1314	8	7724	-526	7724	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGGTTTAAGTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	117632633	117575295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_117576026_117594489_117594643_117623225_117623313_117626488_117626689_117630786_117630986_117632468
ENSMUSG00000028007.14_117575520_117640357_1	chr3	-	1616	8	FSM	ENSMUSG00000028007.14	ENSMUST00000198499.5	1314	8	0	-302	0	18	multi-exon	FALSE	canonical	NA	NA	NA	NA	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGATGTGTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	117640357	117575519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_117576026_117594489_117594643_117623225_117623313_117626488_117626689_117630786_117630986_117632468_117632634_117633576_117633688_117640162
ENSMUSG00000028007.14_117575520_117662585_1	chr3	-	1627	8	NNC	ENSMUSG00000028007.14	novel	2021	9	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGATGTGTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	117662585	117575519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_117576026_117594489_117594643_117623225_117623313_117626488_117626689_117630786_117630986_117633576_117633688_117640162_117640346_117662397
ENSMUSG00000028007.14_117575520_117662585_2	chr3	-	1625	8	NNC	ENSMUSG00000028007.14	novel	2021	9	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGATGTGTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	117662585	117575519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_117576026_117594489_117594636_117623225_117623313_117626488_117626689_117630786_117630986_117633576_117633688_117640162_117640346_117662392
ENSMUSG00000028007.14_117575520_117662585_3	chr3	-	1632	8	FSM	ENSMUSG00000028007.14	ENST00000529992.5	1611	8	-3	-18	0	18	multi-exon	FALSE	canonical	NA	NA	NA	NA	1346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGATGTGTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	117662585	117575519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_117576026_117594489_117594643_117623225_117623313_117626488_117626689_117630786_117630986_117633576_117633688_117640162_117640346_117662392
ENSMUSG00000028007.14_117575822_117662470_1	chr3	-	1380	9	FSM	ENSMUSG00000028007.14	ENSMUST00000029639.12	2021	9	115	526	112	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAACTAAAAGCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	117662470	117575821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_117576026_117594489_117594643_117623225_117623313_117626488_117626689_117630786_117630986_117632468_117632634_117633576_117633688_117640162_117640346_117662392
ENSMUSG00000028007.14_117575822_117662585_1	chr3	-	1495	9	FSM	ENSMUSG00000028007.14	ENSMUST00000029639.12	2021	9	0	526	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAACTAAAAGCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	117662585	117575821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_117576026_117594489_117594643_117623225_117623313_117626488_117626689_117630786_117630986_117632468_117632634_117633576_117633688_117640162_117640346_117662392
ENSMUSG00000028013.17_133015883_133036180_1	chr3	+	351	5	ISM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	12	47659	0	-47457	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAGCAAGATATAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	133015882	133036180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153
ENSMUSG00000028013.17_133015883_133079437_1	chr3	+	926	10	ISM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	12	4402	0	-4200	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	1707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTGGTTGAATCGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	133015882	133079437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383
ENSMUSG00000028013.17_133028331_133053951_1	chr3	+	435	5	ISM	ENSMUSG00000028013.17	ENST00000341695.10	769	9	0	29686	0	-29686	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCTGACCCTTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	133028330	133053951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824
ENSMUSG00000028013.17_133028331_133083637_1	chr3	+	682	8	FSM	ENSMUSG00000028013.17	ENST00000348706.9	682	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACACAGGGCTTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	133028330	133083637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_133028378_133032408_133032463_133036153_133036274_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079474_133083607
ENSMUSG00000028013.17_133028331_133083637_2	chr3	+	679	8	NIC	ENSMUSG00000028013.17	novel	682	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	4282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACACAGGGCTTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	133028330	133083637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_+_133028378_133032408_133032463_133036153_133036274_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079474_133083610
ENSMUSG00000028013.17_133045018_133079473_1	chr3	+	524	5	ISM	ENSMUSG00000028013.17	ENST00000341695.10	769	9	16687	4164	-8808	-4164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTTTAGTCATGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	133045017	133079473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383
ENSMUSG00000028013.17_133045018_133083997_1	chr3	+	931	7	ISM	ENSMUSG00000028013.17	ENSMUST00000122334.8	1368	12	29135	-1	-8808	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTATATTCATAACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	133045017	133083997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083610
ENSMUSG00000028013.17_133053837_133083637_1	chr3	+	446	5	NIC	ENSMUSG00000028013.17	novel	460	5	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACACAGGGCTTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	133053836	133083637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_+_133053952_133073583_133073712_133076140_133076227_133079383_133079474_133083610
ENSMUSG00000028013.17_133073583_133083637_1	chr3	+	352	5	ISM	ENSMUSG00000028013.17	ENSMUST00000122334.8	1368	12	57700	359	-1	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACACAGGGCTTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	133073582	133083637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083610
ENSMUSG00000028013.17_133082309_133083839_1	chr3	+	273	2	ISM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	66438	0	8725	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTTTTATATATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	133082308	133083839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_133082350_133083607
ENSMUSG00000028015.4_81839950_81862132_1	chr3	+	1526	8	FSM	ENSMUSG00000028015.4	ENSMUST00000029649.3	3468	8	42	1900	42	-1900	multi-exon	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAGAACAAATGTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	81839949	81862132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_81840083_81848838_81848945_81849499_81849640_81852168_81852337_81853620_81853743_81858679_81858844_81859505_81859599_81861532
ENSMUSG00000028015.4_81848846_81859654_1	chr3	+	830	6	NNC	ENSMUSG00000028015.4	novel	842	6	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATCATGACAGACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	81848845	81859654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_81848945_81849499_81849640_81852168_81852337_81853632_81853743_81858679_81858844_81859505
ENSMUSG00000028015.4_81848846_81859654_2	chr3	+	836	6	FSM	ENSMUSG00000028015.4	ENST00000680553.1	842	6	8	-2	8	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATCATGACAGACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	81848845	81859654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_81848945_81849499_81849640_81852168_81852337_81853626_81853743_81858679_81858844_81859505
ENSMUSG00000028015.4_81848905_81862306_1	chr3	+	1501	7	ISM	ENSMUSG00000028015.4	ENSMUST00000029649.3	3468	8	8997	1726	67	-1726	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTAGCTTCTTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	81848904	81862306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_81848945_81849499_81849640_81852168_81852337_81853620_81853743_81858679_81858844_81859505_81859599_81861532
ENSMUSG00000028015.4_81852191_81862507_1	chr3	+	1500	5	ISM	ENSMUSG00000028015.4	ENSMUST00000029649.3	3468	8	12283	1525	3353	-1525	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTGCTCCTTGTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	81852190	81862507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_81852337_81853620_81853743_81858679_81858844_81859505_81859599_81861532
ENSMUSG00000028015.4_81852248_81862571_1	chr3	+	1507	5	ISM	ENSMUSG00000028015.4	ENSMUST00000029649.3	3468	8	12340	1461	3410	-1461	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCTGTACCAGTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	81852247	81862571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_81852337_81853620_81853743_81858679_81858844_81859505_81859599_81861532
ENSMUSG00000028015.4_81858741_81862885_1	chr3	+	1549	3	ISM	ENSMUSG00000028015.4	ENSMUST00000029649.3	3468	8	18833	1147	9903	-1147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGTCTATGATTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	81858740	81862885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_81858844_81859505_81859599_81861532
ENSMUSG00000028017.8_129479834_129501027_2	chr3	-	1113	8	ISM	ENSMUSG00000028017.8	ENST00000509793.5	2910	19	32664	1	17699	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTCTTCTTTACCATGA	NA	NA	NA	NA	NA	NA	NA	NA	129501027	129479833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129480002_129484419_129484565_129486566_129486690_129490439_129490566_129491366_129491484_129496113_129496231_129499752_129499900_129500857
ENSMUSG00000028017.8_129479942_129504964_1	chr3	-	1066	9	ISM	ENSMUSG00000028017.8	ENST00000509793.5	2910	19	28727	109	13762	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCATGCTGGCTACGGGC	NA	NA	NA	NA	NA	NA	NA	NA	129504964	129479941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129480002_129484419_129484565_129486566_129486690_129490439_129490566_129491366_129491484_129496113_129496231_129499752_129499900_129500857_129501026_129504901
ENSMUSG00000028017.8_129484413_129505127_1	chr3	-	1176	8	ISM	ENSMUSG00000028017.8	ENST00000509793.5	2910	19	28564	4580	13599	-4580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATCTTTCTGATAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	129505127	129484412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129484565_129486566_129486690_129490439_129490566_129491366_129491484_129496113_129496231_129499752_129499900_129500857_129501026_129504901
ENSMUSG00000028017.8_129486567_129506708_1	chr3	-	1128	8	ISM	ENSMUSG00000028017.8	ENST00000509793.5	2910	19	26983	6734	12018	-6734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGGATGCGAGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	129506708	129486566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129486690_129490439_129490566_129491366_129491484_129496113_129496231_129499752_129499900_129500857_129501026_129504901_129505126_129506602
ENSMUSG00000028017.8_129490440_129510429_1	chr3	-	1155	8	ISM	ENSMUSG00000028017.8	ENST00000509793.5	2910	19	23262	10607	8297	-10607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGAGCCCAGGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	129510429	129490439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129490566_129491366_129491484_129496113_129496231_129499752_129499900_129500857_129501026_129504901_129505126_129506602_129506708_129510278
ENSMUSG00000028017.8_129491367_129511712_1	chr3	-	1167	8	ISM	ENSMUSG00000028017.8	ENST00000509793.5	2910	19	21979	11534	7014	-11534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGCGAAGGCCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	129511712	129491366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129491484_129496113_129496231_129499752_129499900_129500857_129501026_129504901_129505126_129506602_129506708_129510278_129510428_129511572
ENSMUSG00000028017.8_129500856_129517041_1	chr3	-	1157	8	ISM	ENSMUSG00000028017.8	ENSMUST00000199615.5	3211	18	1685	29627	1685	-21023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGGAGAGGCCCCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	129517041	129500855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129501026_129504901_129505126_129506602_129506708_129510278_129510428_129511572_129511710_129512705_129512832_129513879_129514003_129516918
ENSMUSG00000028017.8_129500977_129529488_1	chr3	-	1074	9	ISM	ENSMUSG00000028017.8	ENST00000509793.5	2910	19	4203	21144	4203	-21144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCTATCCCATCGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	129529488	129500976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129501026_129504901_129505126_129506602_129506708_129510278_129510428_129511572_129511710_129512705_129512832_129513879_129514003_129516918_129517042_129529450
ENSMUSG00000028017.8_129505069_129530460_1	chr3	-	1078	9	ISM	ENSMUSG00000028017.8	ENST00000509793.5	2910	19	3231	25236	3231	-25236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTCCGACCGGGTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	129530460	129505068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129505126_129506602_129506708_129510278_129510428_129511572_129511710_129512705_129512832_129513879_129514003_129516918_129517042_129529450_129529654_129530405
ENSMUSG00000028017.8_129510312_129531085_1	chr3	-	1095	8	ISM	ENSMUSG00000028017.8	ENST00000509793.5	2910	19	2606	30479	2606	-30479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGCCGGAGAATCTACT	NA	NA	NA	NA	NA	NA	NA	NA	129531085	129510311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129510428_129511572_129511710_129512705_129512832_129513879_129514003_129516918_129517042_129529450_129529654_129530405_129530631_129531043
ENSMUSG00000028017.8_129510386_129531131_1	chr3	-	1067	8	ISM	ENSMUSG00000028017.8	ENST00000509793.5	2910	19	2560	30553	2560	-30553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGGATGGGTCCCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	129531131	129510385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129510428_129511572_129511710_129512705_129512832_129513879_129514003_129516918_129517042_129529450_129529654_129530405_129530631_129531043
ENSMUSG00000028017.8_129511659_129533544_1	chr3	-	1087	8	ISM	ENSMUSG00000028017.8	ENST00000509793.5	2910	19	147	31826	147	-31826	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGATGGAACAGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	129533544	129511658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129511710_129512705_129512832_129513879_129514003_129516918_129517042_129529450_129529654_129530405_129530631_129531043_129531226_129533490
ENSMUSG00000028017.8_129512804_129533666_1	chr3	-	1060	7	ISM	ENSMUSG00000028017.8	ENST00000509793.5	2910	19	25	32971	25	-32971	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCAGATCTGTCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	129533666	129512803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129512832_129513879_129514003_129516918_129517042_129529450_129529654_129530405_129530631_129531043_129531226_129533490
ENSMUSG00000028018.16_132688851_132777814_1	chr3	-	903	9	ISM	ENSMUSG00000028018.16	ENST00000394730.7	1897	12	19769	1	19769	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTAGACGGGCACTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	132777814	132688850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660
ENSMUSG00000028019.10_80944008_81116519_1	chr3	+	1608	5	ISM	ENSMUSG00000028019.10	ENST00000502773.6	2897	7	-271	4819	-271	-4819	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAATGTCAGTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	80944007	81116519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350
ENSMUSG00000028019.10_80944296_81121341_1	chr3	+	2883	7	FSM	ENSMUSG00000028019.10	ENST00000502773.6	2897	7	17	-3	17	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAAGTGTTCGTCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	80944295	81121341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768_81119882_81119940
ENSMUSG00000028019.10_80944296_81121341_2	chr3	+	2880	7	NNC	ENSMUSG00000028019.10	novel	2897	7	NA	NA	17	3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1030	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAAGTGTTCGTCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	80944295	81121341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768_81119882_81119943
ENSMUSG00000028019.10_81116486_81121341_1	chr3	+	1656	2	ISM	ENSMUSG00000028019.10	ENST00000502773.6	2897	7	172207	-3	172207	3	intron_retention	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAAGTGTTCGTCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	81116485	81121341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_81116569_81119768
ENSMUSG00000028020.17_80751193_80758307_1	chr3	-	1465	2	ISM	ENSMUSG00000028020.17	ENSMUST00000194085.6	1341	8	61089	-1075	61089	44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTTTCTTCTCGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	80758307	80751192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_80752565_80758214
ENSMUSG00000028020.17_80751237_80819426_1	chr3	-	2262	8	ISM	ENSMUSG00000028020.17	ENST00000541722.5	2363	9	1499	0	-30	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGATTTAGTTAATAATT	NA	NA	NA	NA	NA	NA	NA	NA	80819426	80751236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_80752565_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274
ENSMUSG00000028020.17_80751237_80820921_1	chr3	-	2359	9	FSM	ENSMUSG00000028020.17	ENST00000541722.5	2363	9	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGATTTAGTTAATAATT	NA	NA	NA	NA	NA	NA	NA	NA	80820921	80751236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_80752565_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274_80819426_80820823
ENSMUSG00000028020.17_80751341_80758457_1	chr3	-	1467	2	ISM	ENSMUSG00000028020.17	ENSMUST00000194085.6	1341	8	60939	-927	60939	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTTGTTTATTTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	80758457	80751340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_80752565_80758214
ENSMUSG00000028023.17_128993618_129012274_1	chr3	+	748	4	FSM	ENSMUSG00000028023.17	ENSMUST00000106382.11	1757	4	43	966	43	-272	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGCGGTGACCGGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	128993617	129012274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_128993812_128997585_128997642_129009287_129009494_129011982
ENSMUSG00000028023.17_128993618_129012299_1	chr3	+	911	5	FSM	ENSMUSG00000028023.17	ENSMUST00000174661.9	1942	5	91	940	43	-247	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGCCTCAATAGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	128993617	129012299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_128993812_128997585_128997642_128998088_128998227_129009287_129009494_129011982
ENSMUSG00000028023.17_128993618_129012340_1	chr3	+	814	4	FSM	ENSMUSG00000028023.17	ENSMUST00000106382.11	1757	4	43	900	43	-206	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGTCGCTGAATTCCGCG	NA	NA	NA	NA	NA	NA	NA	NA	128993617	129012340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_128993812_128997585_128997642_129009287_129009494_129011982
ENSMUSG00000028023.17_128993761_129012366_1	chr3	+	697	4	FSM	ENSMUSG00000028023.17	ENSMUST00000106382.11	1757	4	186	874	186	-180	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCCGCCTGTCCTTACGC	NA	NA	NA	NA	NA	NA	NA	NA	128993760	129012366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_128993812_128997585_128997642_129009287_129009494_129011982
ENSMUSG00000028023.17_128997596_129012546_1	chr3	+	816	3	ISM	ENSMUSG00000028023.17	ENSMUST00000106382.11	1757	4	4021	694	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCGCCCAGGGCGCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	128997595	129012546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_128997642_129009287_129009494_129011982
ENSMUSG00000028023.17_128998102_129012546_1	chr3	+	895	3	ISM	ENSMUSG00000028023.17	ENSMUST00000172645.8	915	4	506	0	506	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCGCCCAGGGCGCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	128998101	129012546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_128998227_129009287_129009494_129011982
ENSMUSG00000028023.17_128998155_129012567_1	chr3	+	863	3	ISM	ENSMUSG00000028023.17	ENSMUST00000172645.8	915	4	559	-21	559	21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGAGGACTGTCGGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	128998154	129012567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_128998227_129009287_129009494_129011982
ENSMUSG00000028023.17_129007621_129013240_1	chr3	+	2268	3	NNC	ENSMUSG00000028023.17	novel	2271	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	129007620	129013240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_129008431_129009287_129009488_129011982
ENSMUSG00000028024.15_129062824_129092812_1	chr3	-	2457	12	ISM	ENSMUSG00000028024.15	ENST00000265162.10	4118	20	33510	-15	33510	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGCTCAGGGTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	129092812	129062823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129064072_129064993_129065073_129070290_129070432_129074071_129074243_129074333_129074439_129074550_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129086854_129086935_129092478_129092631_129092746
ENSMUSG00000028024.15_129062969_129097429_1	chr3	-	2378	13	ISM	ENSMUSG00000028024.15	ENST00000265162.10	4118	20	28893	130	28893	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAAAATGGAGAAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	129097429	129062968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129064072_129064993_129065073_129070290_129070432_129074071_129074243_129074333_129074439_129074550_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129086854_129086935_129092478_129092631_129092746_129092813_129097363
ENSMUSG00000028024.15_129063173_129102683_1	chr3	-	2321	15	ISM	ENSMUSG00000028024.15	ENST00000265162.10	4118	20	23639	334	23639	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACCTTGGTCACGCATG	NA	NA	NA	NA	NA	NA	NA	NA	129102683	129063172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129064072_129064993_129065073_129070290_129070432_129074071_129074243_129074333_129074439_129074550_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129086854_129086935_129092478_129092631_129092746_129092813_129097363_129097430_129099055_129099186_129102666
ENSMUSG00000028024.15_129063401_129106248_1	chr3	-	2388	17	ISM	ENSMUSG00000028024.15	ENST00000265162.10	4118	20	20074	562	20074	-562	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGCTTAAGTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	129106248	129063400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129064072_129064993_129065073_129070290_129070432_129074071_129074243_129074333_129074439_129074550_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129086854_129086935_129092478_129092631_129092746_129092813_129097363_129097430_129099055_129099186_129102666_129102785_129103417_129103573_129106209
ENSMUSG00000028024.15_129063541_129113076_1	chr3	-	2378	18	ISM	ENSMUSG00000028024.15	ENST00000265162.10	4118	20	13246	702	13246	-702	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATTGATTTTTAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	129113076	129063540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129064072_129064993_129065073_129070290_129070432_129074071_129074243_129074333_129074439_129074550_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129086854_129086935_129092478_129092631_129092746_129092813_129097363_129097430_129099055_129099186_129102666_129102785_129103417_129103573_129106209_129106331_129113028
ENSMUSG00000028024.15_129063665_129115049_1	chr3	-	2379	19	ISM	ENSMUSG00000028024.15	ENST00000265162.10	4118	20	11273	826	11273	-826	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGTTTAATAGTCACATT	NA	NA	NA	NA	NA	NA	NA	NA	129115049	129063664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129064072_129064993_129065073_129070290_129070432_129074071_129074243_129074333_129074439_129074550_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129086854_129086935_129092478_129092631_129092746_129092813_129097363_129097430_129099055_129099186_129102666_129102785_129103417_129103573_129106209_129106331_129113028_129113161_129115008
ENSMUSG00000028024.15_129063711_129115113_1	chr3	-	2397	19	ISM	ENSMUSG00000028024.15	ENST00000265162.10	4118	20	11209	872	11209	-872	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGATTTCTGCTAAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	129115113	129063710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129064072_129064993_129065073_129070290_129070432_129074071_129074243_129074333_129074439_129074550_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129086854_129086935_129092478_129092631_129092746_129092813_129097363_129097430_129099055_129099186_129102666_129102785_129103417_129103573_129106209_129106331_129113028_129113161_129115008
ENSMUSG00000028024.15_129063773_129115152_1	chr3	-	2374	19	ISM	ENSMUSG00000028024.15	ENST00000265162.10	4118	20	11170	934	11170	-934	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTTAAATTATTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	129115152	129063772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129064072_129064993_129065073_129070290_129070432_129074071_129074243_129074333_129074439_129074550_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129086854_129086935_129092478_129092631_129092746_129092813_129097363_129097430_129099055_129099186_129102666_129102785_129103417_129103573_129106209_129106331_129113028_129113161_129115008
ENSMUSG00000028024.15_129063926_129125677_1	chr3	-	2386	20	FSM	ENSMUSG00000028024.15	ENST00000265162.10	4118	20	645	1087	645	-1087	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGACAGTGAAAACACGTGC	NA	NA	NA	NA	NA	NA	NA	NA	129125677	129063925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_129064072_129064993_129065073_129070290_129070432_129074071_129074243_129074333_129074439_129074550_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129086854_129086935_129092478_129092631_129092746_129092813_129097363_129097430_129099055_129099186_129102666_129102785_129103417_129103573_129106209_129106331_129113028_129113161_129115008_129115151_129125510
ENSMUSG00000028024.15_129063926_129125747_1	chr3	-	2456	20	FSM	ENSMUSG00000028024.15	ENST00000265162.10	4118	20	575	1087	575	-1087	multi-exon	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGACAGTGAAAACACGTGC	NA	NA	NA	NA	NA	NA	NA	NA	129125747	129063925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_129064072_129064993_129065073_129070290_129070432_129074071_129074243_129074333_129074439_129074550_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129086854_129086935_129092478_129092631_129092746_129092813_129097363_129097430_129099055_129099186_129102666_129102785_129103417_129103573_129106209_129106331_129113028_129113161_129115008_129115151_129125510
ENSMUSG00000028024.15_129064994_129125913_1	chr3	-	2476	19	ISM	ENSMUSG00000028024.15	ENST00000265162.10	4118	20	409	2155	409	-2155	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGAGGCCGATTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	129125913	129064993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129065073_129070290_129070432_129074071_129074243_129074333_129074439_129074550_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129086854_129086935_129092478_129092631_129092746_129092813_129097363_129097430_129099055_129099186_129102666_129102785_129103417_129103573_129106209_129106331_129113028_129113161_129115008_129115151_129125510
ENSMUSG00000028024.15_129074074_129126016_1	chr3	-	2357	17	ISM	ENSMUSG00000028024.15	ENST00000265162.10	4118	20	306	11235	306	-11235	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATCTGTTCCCGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	129126016	129074073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129074243_129074333_129074439_129074550_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129086854_129086935_129092478_129092631_129092746_129092813_129097363_129097430_129099055_129099186_129102666_129102785_129103417_129103573_129106209_129106331_129113028_129113161_129115008_129115151_129125510
ENSMUSG00000028024.15_129074114_129126083_1	chr3	-	2384	17	ISM	ENSMUSG00000028024.15	ENST00000265162.10	4118	20	239	11275	239	-11275	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGGTTAGCTTCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	129126083	129074113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129074243_129074333_129074439_129074550_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129086854_129086935_129092478_129092631_129092746_129092813_129097363_129097430_129099055_129099186_129102666_129102785_129103417_129103573_129106209_129106331_129113028_129113161_129115008_129115151_129125510
ENSMUSG00000028024.15_129074184_129126123_1	chr3	-	2354	17	ISM	ENSMUSG00000028024.15	ENST00000265162.10	4118	20	199	11345	199	-11345	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAGCGTGGAACTATACC	NA	NA	NA	NA	NA	NA	NA	NA	129126123	129074183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129074243_129074333_129074439_129074550_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129086854_129086935_129092478_129092631_129092746_129092813_129097363_129097430_129099055_129099186_129102666_129102785_129103417_129103573_129106209_129106331_129113028_129113161_129115008_129115151_129125510
ENSMUSG00000028024.15_129074345_129126369_1	chr3	-	2530	16	ISM	ENSMUSG00000028024.15	ENST00000265162.10	4118	20	-47	11506	0	-11506	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCGCAAGGTGACTACT	NA	NA	NA	NA	NA	NA	NA	NA	129126369	129074344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129074439_129074550_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129086854_129086935_129092478_129092631_129092746_129092813_129097363_129097430_129099055_129099186_129102666_129102785_129103417_129103573_129106209_129106331_129113028_129113161_129115008_129115151_129125510
ENSMUSG00000028024.15_129074409_129126369_1	chr3	-	2466	16	ISM	ENSMUSG00000028024.15	ENST00000265162.10	4118	20	-47	11570	0	-11570	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAAGATGGGGGACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	129126369	129074408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_129074439_129074550_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129086854_129086935_129092478_129092631_129092746_129092813_129097363_129097430_129099055_129099186_129102666_129102785_129103417_129103573_129106209_129106331_129113028_129113161_129115008_129115151_129125510
ENSMUSG00000028028.12_127464592_127474410_1	chr3	-	2094	5	ISM	ENSMUSG00000028028.12	ENST00000504176.6	3588	12	48690	-2	48690	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTATAGCCTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	127474410	127464591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127464781_127466008_127466196_127466968_127467132_127471334_127471489_127473009
ENSMUSG00000028028.12_127464646_127474465_1	chr3	-	2095	5	ISM	ENSMUSG00000028028.12	ENST00000504176.6	3588	12	48635	52	48635	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATGAAATATGCCATCGT	NA	NA	NA	NA	NA	NA	NA	NA	127474465	127464645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127464781_127466008_127466196_127466968_127467132_127471334_127471489_127473009
ENSMUSG00000028028.12_127464694_127474525_1	chr3	-	2107	5	ISM	ENSMUSG00000028028.12	ENST00000504176.6	3588	12	48575	100	48575	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAAGCGGGGAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	127474525	127464693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127464781_127466008_127466196_127466968_127467132_127471334_127471489_127473009
ENSMUSG00000028028.12_127466038_127474635_1	chr3	-	2101	4	ISM	ENSMUSG00000028028.12	ENST00000504176.6	3588	12	48465	1444	48465	-1444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAGAGATGTGGTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	127474635	127466037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127466196_127466968_127467132_127471334_127471489_127473009
ENSMUSG00000028028.12_127466073_127474702_1	chr3	-	2133	4	ISM	ENSMUSG00000028028.12	ENST00000504176.6	3588	12	48398	1479	48398	-1479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTATGGCCATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	127474702	127466072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127466196_127466968_127467132_127471334_127471489_127473009
ENSMUSG00000028028.12_127466143_127474733_1	chr3	-	2094	4	ISM	ENSMUSG00000028028.12	ENST00000504176.6	3588	12	48367	1549	48367	-1549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGAATTCGTCAAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	127474733	127466142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127466196_127466968_127467132_127471334_127471489_127473009
ENSMUSG00000028028.12_127467025_127474910_1	chr3	-	2162	3	ISM	ENSMUSG00000028028.12	ENST00000504176.6	3588	12	48190	2431	48190	-2431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACGAGCAAAAGATTCCG	NA	NA	NA	NA	NA	NA	NA	NA	127474910	127467024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127467132_127471334_127471489_127473009
ENSMUSG00000028028.12_127467101_127474938_1	chr3	-	2114	3	ISM	ENSMUSG00000028028.12	ENST00000504176.6	3588	12	48162	2507	48162	-2507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCCGGCACCACTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	127474938	127467100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127467132_127471334_127471489_127473009
ENSMUSG00000028028.12_127471441_127475054_1	chr3	-	2093	2	ISM	ENSMUSG00000028028.12	ENST00000504176.6	3588	12	48046	6847	48046	-6847	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAACTGTGGTGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	127475054	127471440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127471489_127473009
ENSMUSG00000028028.12_127473169_127478086_1	chr3	-	2134	3	ISM	ENSMUSG00000028028.12	ENST00000504176.6	3588	12	45014	8575	45014	-8575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGCTGGCAGGACAGACC	NA	NA	NA	NA	NA	NA	NA	NA	127478086	127473168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127475102_127477156_127477262_127477990
ENSMUSG00000028028.12_127473169_127478963_1	chr3	-	2211	4	ISM	ENSMUSG00000028028.12	ENST00000504176.6	3588	12	44137	8575	44137	-8575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGCTGGCAGGACAGACC	NA	NA	NA	NA	NA	NA	NA	NA	127478963	127473168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127475102_127477156_127477262_127477990_127478087_127478886
ENSMUSG00000028028.12_127473445_127481295_1	chr3	-	2087	6	ISM	ENSMUSG00000028028.12	ENST00000504176.6	3588	12	41805	8851	41805	-8851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGGCCAAGATGGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	127481295	127473444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127475102_127477156_127477262_127477990_127478087_127478886_127478964_127479905_127479993_127481230
ENSMUSG00000028028.12_127473758_127523051_1	chr3	-	2100	8	ISM	ENSMUSG00000028028.12	ENST00000504176.6	3588	12	49	9164	49	-9164	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGGAGAAAAGAATGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	127523051	127473757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127475102_127477156_127477262_127477990_127478087_127478886_127478964_127479905_127479993_127481230_127481291_127489202_127489402_127522919
ENSMUSG00000028029.12_132366260_132377777_1	chr3	-	450	3	ISM	ENSMUSG00000028029.12	ENST00000442366.6	882	5	5117	18	5117	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTTGCTCATTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	132377777	132366259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_132366503_132373145_132373315_132377739
ENSMUSG00000028029.12_132366260_132377777_2	chr3	-	449	3	ISM	ENSMUSG00000028029.12	ENST00000684504.1	1019	6	5117	-9	5117	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTTGCTCATTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	132377777	132366259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_132366498_132373141_132373315_132377739
ENSMUSG00000028029.12_132366260_132377858_1	chr3	-	531	3	ISM	ENSMUSG00000028029.12	ENST00000442366.6	882	5	5036	18	5036	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTTGCTCATTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	132377858	132366259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_132366503_132373145_132373315_132377739
ENSMUSG00000028029.12_132366400_132380551_1	chr3	-	523	4	ISM	ENSMUSG00000028029.12	ENST00000442366.6	882	5	2343	158	2343	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	938	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGGTGAAGGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	132380551	132366399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_132366503_132373145_132373315_132377739_132377949_132380509
ENSMUSG00000028029.12_132366465_132379745_1	chr3	-	436	4	ISM	ENSMUSG00000028029.12	ENSMUST00000029663.11	1126	7	9900	205	3149	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGCAGATCCAGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	132379745	132366464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725
ENSMUSG00000028029.12_132373213_132379890_1	chr3	-	476	3	ISM	ENSMUSG00000028029.12	ENST00000684504.1	1019	6	3004	6944	3004	-6944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGATTCTGGCCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	132379890	132373212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_132373315_132377739_132377949_132379725
ENSMUSG00000028029.12_132373213_132380551_1	chr3	-	518	4	ISM	ENSMUSG00000028029.12	ENST00000684504.1	1019	6	2343	6944	2343	-6944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGATTCTGGCCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	132380551	132373212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_132373315_132377739_132377949_132379725_132379891_132380509
ENSMUSG00000028029.12_132373213_132382899_1	chr3	-	559	4	ISM	ENSMUSG00000028029.12	ENST00000442366.6	882	5	-5	6971	-5	-6944	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGATTCTGGCCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	132382899	132373212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_132373315_132377739_132377949_132380509_132380624_132382765
ENSMUSG00000028029.12_132377807_132382799_1	chr3	-	455	4	ISM	ENSMUSG00000028029.12	ENST00000684504.1	1019	6	95	11538	95	-11538	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGGGAGAAGCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	132382799	132377806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_132377949_132379725_132379891_132380509_132380624_132382765
ENSMUSG00000028029.12_132377935_132382899_1	chr3	-	427	4	ISM	ENSMUSG00000028029.12	ENST00000684504.1	1019	6	-5	11666	-5	-11666	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGCAGTCGGCAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	132382899	132377934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_132377949_132379725_132379891_132380509_132380624_132382765
ENSMUSG00000028029.12_132379767_132389598_1	chr3	-	417	4	ISM	ENSMUSG00000028029.12	ENSMUST00000029663.11	1126	7	47	13507	47	-13498	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAGAAGAAAAGAAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	132389598	132379766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_132379891_132380509_132380624_132382765_132382900_132389553
ENSMUSG00000028030.13_132389961_132421408_1	chr3	+	737	6	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	56	126041	56	-126041	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTGCCAAGTGAAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	132389960	132421408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349
ENSMUSG00000028030.13_132390078_132421456_1	chr3	+	668	6	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	173	125993	173	-125993	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTCTTGGGATAATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	132390077	132421456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349
ENSMUSG00000028030.13_132392636_132428090_1	chr3	+	669	8	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	2731	119359	2731	-119359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGAAGAAGTGCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	132392635	132428090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066
ENSMUSG00000028030.13_132400157_132428528_1	chr3	+	676	8	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	10252	118921	10252	-118921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCGCTGATCTAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	132400156	132428528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428
ENSMUSG00000028030.13_132411333_132430589_1	chr3	+	659	8	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	21428	116860	21428	-116860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTTGGCTGGAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	132411332	132430589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536
ENSMUSG00000028030.13_132421425_132432467_1	chr3	+	690	8	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	31520	114982	31520	-114982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTAGATGCCCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	132421424	132432467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417
ENSMUSG00000028030.13_132424411_132432892_1	chr3	+	674	8	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	34506	114557	34506	-114557	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGAATATCAGCTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	132424410	132432892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811
ENSMUSG00000028030.13_132428067_132437991_1	chr3	+	695	7	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	38162	109458	38162	-109458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTAACCTGGGCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	132428066	132437991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926
ENSMUSG00000028030.13_132428500_132440520_1	chr3	+	701	8	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	38595	106929	38595	-106929	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCATCACCAGAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	132428499	132440520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478
ENSMUSG00000028030.13_132431451_132443349_1	chr3	+	675	8	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	41546	104100	41546	-104100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAAATGCTTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	132431450	132443349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265
ENSMUSG00000028030.13_132432885_132458327_1	chr3	+	663	9	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	42980	89122	42980	-89122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCCCATTCTGCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	132432884	132458327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268
ENSMUSG00000028030.13_132440141_132480255_1	chr3	+	651	8	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	50236	67194	50236	-67194	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATGCTCAGCCTCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	132440140	132480255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181
ENSMUSG00000028030.13_132441835_132507339_1	chr3	+	671	7	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	51930	40110	51930	-40110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGAGCTCACAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	132441834	132507339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264
ENSMUSG00000028030.13_132448780_132521035_1	chr3	+	705	6	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	58875	26414	58875	-26414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACCACCATGCTGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	132448779	132521035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950
ENSMUSG00000028030.13_132458338_132543779_1	chr3	+	663	5	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	68433	3670	68433	-3670	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACAAGATCAGGCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	132458337	132543779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
ENSMUSG00000028030.13_132480244_132543942_1	chr3	+	671	4	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	90339	3507	90339	-3507	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTGGAAATCGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	132480243	132543942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132480358_132507264_132507441_132520950_132521111_132543721
ENSMUSG00000028030.13_132480305_132543992_1	chr3	+	660	4	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	90400	3457	90400	-3457	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCTCATGTATTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	132480304	132543992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132480358_132507264_132507441_132520950_132521111_132543721
ENSMUSG00000028030.13_132507328_132544130_1	chr3	+	682	3	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	117423	3319	117423	-3319	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGAAAGCTGCCGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	132507327	132544130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_132507441_132520950_132521111_132543721
ENSMUSG00000028032.14_131270529_131305739_1	chr3	+	939	6	ISM	ENSMUSG00000028032.14	ENSMUST00000029666.14	2600	12	0	43693	0	-43692	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTCTCTTTTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	131270528	131305739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131270745_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625
ENSMUSG00000028032.14_131270658_131307847_1	chr3	+	922	7	ISM	ENSMUSG00000028032.14	ENSMUST00000029666.14	2600	12	129	41585	1	-41584	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGATAGTCCACGTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	131270657	131307847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131270745_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735
ENSMUSG00000028032.14_131285071_131311633_1	chr3	+	864	7	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	14411	37799	14411	-37798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGACAGCTACGCACG	NA	NA	NA	NA	NA	NA	NA	NA	131285070	131311633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605
ENSMUSG00000028032.14_131285116_131311694_1	chr3	+	880	7	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	14456	37738	14456	-37737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATGAGGGCCGCCGCGT	NA	NA	NA	NA	NA	NA	NA	NA	131285115	131311694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605
ENSMUSG00000028032.14_131285156_131311762_1	chr3	+	908	7	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	14496	37670	14496	-37669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCCAGACAGTGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	131285155	131311762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605
ENSMUSG00000028032.14_131288205_131313113_1	chr3	+	888	7	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	17545	36319	17545	-36318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGAGGAGATCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	131288204	131313113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088
ENSMUSG00000028032.14_131288266_131313169_1	chr3	+	883	7	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	17606	36263	17606	-36262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTACCGCCTTACCCCGAC	NA	NA	NA	NA	NA	NA	NA	NA	131288265	131313169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088
ENSMUSG00000028032.14_131288315_131313224_1	chr3	+	889	7	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	17655	36208	17655	-36207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGTGAGCCTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	131288314	131313224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088
ENSMUSG00000028032.14_131288848_131324847_1	chr3	+	892	7	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	18188	24585	18188	-24584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACAAGCAGCTTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	131288847	131324847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781
ENSMUSG00000028032.14_131288910_131324888_1	chr3	+	871	7	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	18250	24544	18250	-24543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCCTCCATCCTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	131288909	131324888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781
ENSMUSG00000028032.14_131288956_131324946_1	chr3	+	883	7	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	18296	24486	18296	-24485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAAGCAGCACGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	131288955	131324946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781
ENSMUSG00000028032.14_131290807_131325050_1	chr3	+	958	6	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	20147	24382	20147	-24381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGCTGCCTTTAAGATAC	NA	NA	NA	NA	NA	NA	NA	NA	131290806	131325050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781
ENSMUSG00000028032.14_131305656_131337432_1	chr3	+	893	6	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	34996	12000	34996	-11999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGGAAGGACCTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	131305655	131337432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346
ENSMUSG00000028032.14_131305721_131337473_1	chr3	+	869	6	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	35061	11959	35061	-11958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGACGATGGCCCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	131305720	131337473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346
ENSMUSG00000028032.14_131307736_131337576_1	chr3	+	953	5	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	37076	11856	37076	-11855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTTACCCTTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	131307735	131337576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346
ENSMUSG00000028032.14_131311651_131348802_1	chr3	+	874	5	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	40991	630	40991	-629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCCCCCAAGGCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	131311650	131348802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
ENSMUSG00000028032.14_131311702_131348857_1	chr3	+	878	5	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	41042	575	41042	-574	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAACTGCTGAGCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	131311701	131348857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
ENSMUSG00000028032.14_131311760_131348913_1	chr3	+	876	5	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	41100	519	41100	-518	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACGCAGCCACCGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	131311759	131348913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
ENSMUSG00000028032.14_131313128_131349019_1	chr3	+	891	4	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	42468	413	42468	-412	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTTCAAACTAGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	131313127	131349019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131313225_131324781_131325051_131337346_131337577_131348724
ENSMUSG00000028032.14_131313180_131349075_1	chr3	+	895	4	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	42520	357	42520	-356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATATTCTTATAATACG	NA	NA	NA	NA	NA	NA	NA	NA	131313179	131349075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131313225_131324781_131325051_131337346_131337577_131348724
ENSMUSG00000028032.14_131337345_131349432_1	chr3	+	940	2	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	66685	0	66685	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGTTTGTGTGCATAT	NA	NA	NA	NA	NA	NA	NA	NA	131337344	131349432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_131337577_131348724
ENSMUSG00000028034.16_151916269_151938286_1	chr3	+	2135	20	NNC	ENSMUSG00000028034.16	novel	5878	21	NA	NA	39	-122	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAAATGTATTTGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	151916268	151938286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927051_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151919612_151938408_1	chr3	+	2190	19	NNC	ENSMUSG00000028034.16	novel	2526	20	NA	NA	3382	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	151919611	151938408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927051_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151925387_151938408_1	chr3	+	1778	13	NNC	ENSMUSG00000028034.16	novel	2374	20	NA	NA	9157	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	151925386	151938408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927051_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151925418_151938766_1	chr3	+	2096	13	NNC	ENSMUSG00000028034.16	novel	5878	21	NA	NA	9188	357	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTTATTTCCGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	151925417	151938766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927051_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151925815_151938963_1	chr3	+	2086	11	NNC	ENSMUSG00000028034.16	novel	5878	21	NA	NA	9585	554	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGCCATTGAAACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	151925814	151938963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_151925875_151926101_151926205_151926322_151926424_151926903_151927051_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151925857_151939033_1	chr3	+	2114	11	NNC	ENSMUSG00000028034.16	novel	5878	21	NA	NA	9627	624	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCTTGTAATTGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	151925856	151939033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_151925875_151926101_151926205_151926322_151926424_151926903_151927051_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151926183_151939138_1	chr3	+	2120	10	NNC	ENSMUSG00000028034.16	novel	5878	21	NA	NA	9953	729	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAAAACCATTGTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	151926182	151939138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_151926205_151926322_151926424_151926903_151927051_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151926386_151939247_1	chr3	+	2144	9	NNC	ENSMUSG00000028034.16	novel	5878	21	NA	NA	10156	838	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCCAGCCAGTATAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	151926385	151939247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_151926424_151926903_151927051_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151927809_151939461_1	chr3	+	2085	7	ISM	ENSMUSG00000028034.16	ENST00000370768.7	5878	21	11579	3004	11579	1052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAACTGCTTCTTAACAT	NA	NA	NA	NA	NA	NA	NA	NA	151927808	151939461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151928465_151938145_1	chr3	+	706	6	ISM	ENSMUSG00000028034.16	ENSMUST00000196695.5	2374	20	12309	263	12235	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGTAGTGTTTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	151928464	151938145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151928495_151939570_1	chr3	+	2092	6	ISM	ENSMUSG00000028034.16	ENST00000370768.7	5878	21	12265	2895	12265	1161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTAACAAAGTTGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	151928494	151939570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151928542_151939631_1	chr3	+	2106	6	ISM	ENSMUSG00000028034.16	ENST00000370768.7	5878	21	12312	2834	12312	1222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTATCTTTTATAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	151928541	151939631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151928935_151939765_1	chr3	+	2152	5	ISM	ENSMUSG00000028034.16	ENST00000370768.7	5878	21	12705	2700	12705	1356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGACAAAAATGTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	151928934	151939765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151933825_151939917_1	chr3	+	2090	3	ISM	ENSMUSG00000028034.16	ENSMUST00000196695.5	2374	20	17669	-1509	17595	1508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTAAGGCCTTACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	151933824	151939917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151937554_151940023_1	chr3	+	2098	2	ISM	ENSMUSG00000028034.16	ENSMUST00000196695.5	2374	20	21398	-1615	21324	1614	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCATTTAGTAATTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	151937553	151940023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_151937660_151938031
ENSMUSG00000028034.16_151937617_151940072_1	chr3	+	2084	2	ISM	ENSMUSG00000028034.16	ENSMUST00000196695.5	2374	20	21461	-1664	21387	1663	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAAATTGGAGGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	151937616	151940072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_151937660_151938031
ENSMUSG00000028034.16_151939506_151942061_1	chr3	+	2086	2	ISM	ENSMUSG00000028034.16	ENST00000370768.7	5878	21	23276	404	23276	-402	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTACAAATTTAATTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	151939505	151942061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_151941491_151941960
ENSMUSG00000028034.16_151939825_151942463_1	chr3	+	2169	2	ISM	ENSMUSG00000028034.16	ENST00000370768.7	5878	21	23595	2	23595	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	151939824	151942463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_151941491_151941960
ENSMUSG00000028034.16_151939909_151942463_1	chr3	+	2085	2	ISM	ENSMUSG00000028034.16	ENST00000370768.7	5878	21	23679	2	23679	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	151939908	151942463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_151941491_151941960
ENSMUSG00000028040.8_89240697_89242720_1	chr3	-	1349	3	ISM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	2615	0	2615	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTTCTTTGTGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	89242720	89240696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89241740_89242088_89242158_89242483
ENSMUSG00000028040.8_89240824_89245181_1	chr3	-	1318	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	154	127	154	-127	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAGAGAGAGAACACACC	NA	NA	NA	NA	NA	NA	NA	NA	89245181	89240823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
ENSMUSG00000028040.8_89240869_89245335_1	chr3	-	1427	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	0	172	0	-172	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCTTGACCACCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	89245335	89240868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
ENSMUSG00000028040.8_89240933_89245335_1	chr3	-	1363	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	0	236	0	-236	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAACCACCACCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	89245335	89240932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
ENSMUSG00000028041.18_89246951_89248884_1	chr3	-	505	3	ISM	ENSMUSG00000028041.18	ENSMUST00000074582.7	2799	21	8398	-4	8343	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	89248884	89246950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89247261_89247361_89247487_89248814
ENSMUSG00000028041.18_89247222_89254375_1	chr3	-	2165	18	ISM	ENSMUSG00000028041.18	ENST00000449910.6	2674	23	2881	27	2852	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACCTCTGGAGATTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	89254375	89247221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89247261_89247361_89247487_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253310_89254183
ENSMUSG00000028041.18_89247222_89254794_1	chr3	-	2179	18	ISM	ENSMUSG00000028041.18	ENST00000368412.7	2532	21	2462	27	2433	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACCTCTGGAGATTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	89254794	89247221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89247261_89247361_89247487_89248169_89248245_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253310_89254183_89254374_89254458_89254536_89254713
ENSMUSG00000028041.18_89247222_89257266_1	chr3	-	1636	13	FSM	ENSMUSG00000028041.18	ENST00000368413.5	1653	13	-10	27	0	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACCTCTGGAGATTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	89257266	89247221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89247261_89247361_89247487_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89255170_89255253_89255824_89255935_89257115
ENSMUSG00000028041.18_89247381_89254535_1	chr3	-	2182	18	ISM	ENSMUSG00000028041.18	ENST00000449910.6	2674	23	2721	186	2692	-186	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGTGGTGCCCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	89254535	89247380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89247487_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253310_89254183_89254374_89254458
ENSMUSG00000028041.18_89247381_89255255_1	chr3	-	2199	18	ISM	ENSMUSG00000028041.18	ENST00000368412.7	2532	21	2001	186	1972	-186	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGTGGTGCCCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	89255255	89247380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89247487_89248169_89248245_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253310_89254183_89254374_89254458_89254536_89254713_89254793_89255175
ENSMUSG00000028041.18_89247708_89249668_1	chr3	-	354	4	ISM	ENSMUSG00000028041.18	ENST00000359280.8	2599	22	7588	513	7559	-513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGTGAGGGGGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	89249668	89247707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89247780_89248814_89248885_89249243_89249383_89249595
ENSMUSG00000028041.18_89247708_89254794_1	chr3	-	2157	18	ISM	ENSMUSG00000028041.18	ENST00000449910.6	2674	23	2462	513	2433	-513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGTGAGGGGGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	89254794	89247707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253310_89254183_89254374_89254458_89254536_89254713
ENSMUSG00000028041.18_89248170_89255255_1	chr3	-	2163	18	ISM	ENSMUSG00000028041.18	ENST00000449910.6	2674	23	2001	975	1972	-975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAATCTGGGCTGGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	89255255	89248169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253310_89254183_89254374_89254458_89254536_89254713_89254793_89255175
ENSMUSG00000028041.18_89248170_89255936_1	chr3	-	2202	18	ISM	ENSMUSG00000028041.18	ENST00000368412.7	2532	21	1320	975	1291	-975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAATCTGGGCTGGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	89255936	89248169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89248245_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253310_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824
ENSMUSG00000028041.18_89248815_89255936_1	chr3	-	2197	18	ISM	ENSMUSG00000028041.18	ENST00000531455.5	2529	21	1291	1620	1291	-1620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCCCTGGATGCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	89255936	89248814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253310_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824
ENSMUSG00000028041.18_89249307_89257266_1	chr3	-	2213	18	ISM	ENSMUSG00000028041.18	ENST00000359280.8	2599	22	-10	2112	0	-2112	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCACCGTGCCCGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	89257266	89249306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253310_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ENSMUSG00000028044.7_89322779_89325588_1	chr3	-	747	3	FSM	ENSMUSG00000028044.7	ENSMUST00000029679.4	849	3	102	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTGGTTATAAGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	89325588	89322778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89323271_89323580_89323709_89325461
ENSMUSG00000028047.12_89122540_89125067_1	chr3	+	375	3	ISM	ENSMUSG00000028047.12	ENSMUST00000119084.2	2993	22	0	9044	0	-8836	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACACACGGCTCTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	89122539	89125067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89122632_89123987_89124195_89124991
ENSMUSG00000028047.12_89123987_89132619_1	chr3	+	2481	19	ISM	ENSMUSG00000028047.12	ENST00000368378.7	3045	21	0	1525	0	-1284	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2085	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCCTGATCAGGTACGA	NA	NA	NA	NA	NA	NA	NA	NA	89123986	89132619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89124195_89124991_89125249_89125334_89125438_89126327_89126437_89126519_89126572_89126695_89126845_89127161_89127303_89127458_89127537_89128264_89128418_89128640_89128752_89128833_89128942_89130309_89130470_89130711_89130831_89130937_89130991_89131266_89131461_89131592_89131772_89131883_89131933_89132116_89132314_89132558
ENSMUSG00000028047.12_89124097_89132619_1	chr3	+	2371	19	ISM	ENSMUSG00000028047.12	ENST00000368378.7	3045	21	110	1525	110	-1284	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1920	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCCTGATCAGGTACGA	NA	NA	NA	NA	NA	NA	NA	NA	89124096	89132619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89124195_89124991_89125249_89125334_89125438_89126327_89126437_89126519_89126572_89126695_89126845_89127161_89127303_89127458_89127537_89128264_89128418_89128640_89128752_89128833_89128942_89130309_89130470_89130711_89130831_89130937_89130991_89131266_89131461_89131592_89131772_89131883_89131933_89132116_89132314_89132558
ENSMUSG00000028047.12_89124097_89132732_1	chr3	+	2484	19	ISM	ENSMUSG00000028047.12	ENST00000368378.7	3045	21	110	1412	110	-1171	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGAAAAGGCTTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	89124096	89132732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89124195_89124991_89125249_89125334_89125438_89126327_89126437_89126519_89126572_89126695_89126845_89127161_89127303_89127458_89127537_89128264_89128418_89128640_89128752_89128833_89128942_89130309_89130470_89130711_89130831_89130937_89130991_89131266_89131461_89131592_89131772_89131883_89131933_89132116_89132314_89132558
ENSMUSG00000028047.12_89125122_89133870_1	chr3	+	2433	20	ISM	ENSMUSG00000028047.12	ENST00000368378.7	3045	21	1135	274	1135	-33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2537	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCCAGGGAAGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	89125121	89133870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89125249_89125334_89125438_89126327_89126437_89126519_89126572_89126695_89126845_89127161_89127303_89127458_89127537_89128264_89128418_89128640_89128752_89128833_89128942_89130309_89130470_89130711_89130831_89130937_89130991_89131266_89131461_89131592_89131772_89131883_89131933_89132116_89132314_89132558_89132732_89133610_89133751_89133832
ENSMUSG00000028047.12_89125166_89133918_1	chr3	+	2437	20	ISM	ENSMUSG00000028047.12	ENST00000368378.7	3045	21	1179	226	1179	15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2594	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGGAGACCTTTGGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	89125165	89133918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89125249_89125334_89125438_89126327_89126437_89126519_89126572_89126695_89126845_89127161_89127303_89127458_89127537_89128264_89128418_89128640_89128752_89128833_89128942_89130309_89130470_89130711_89130831_89130937_89130991_89131266_89131461_89131592_89131772_89131883_89131933_89132116_89132314_89132558_89132732_89133610_89133751_89133832
ENSMUSG00000028047.12_89125207_89126760_1	chr3	+	345	5	ISM	ENSMUSG00000028047.12	ENST00000541576.5	3188	22	2747	7382	1220	-7143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGAGTACCCGGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	89125206	89126760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89125249_89125334_89125438_89126353_89126437_89126519_89126572_89126695
ENSMUSG00000028047.12_89125232_89134010_1	chr3	+	2463	20	ISM	ENSMUSG00000028047.12	ENST00000368378.7	3045	21	1245	134	1245	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2887	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAGCTCAGCCCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	89125231	89134010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89125249_89125334_89125438_89126327_89126437_89126519_89126572_89126695_89126845_89127161_89127303_89127458_89127537_89128264_89128418_89128640_89128752_89128833_89128942_89130309_89130470_89130711_89130831_89130937_89130991_89131266_89131461_89131592_89131772_89131883_89131933_89132116_89132314_89132558_89132732_89133610_89133751_89133832
ENSMUSG00000028047.12_89126326_89134144_1	chr3	+	2479	18	ISM	ENSMUSG00000028047.12	ENST00000368378.7	3045	21	2339	0	2339	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGCAATTGTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	89126325	89134144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89126437_89126519_89126572_89126695_89126845_89127161_89127303_89127458_89127537_89128264_89128418_89128640_89128752_89128833_89128942_89130309_89130470_89130711_89130831_89130937_89130991_89131266_89131461_89131592_89131772_89131883_89131933_89132116_89132314_89132558_89132732_89133610_89133751_89133832
ENSMUSG00000028047.12_89132625_89133914_1	chr3	+	329	3	ISM	ENSMUSG00000028047.12	ENST00000541990.5	2763	20	8638	-11	8638	11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATCGGAGACCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	89132624	89133914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89132732_89133610_89133751_89133832
ENSMUSG00000028048.12_89110235_89115294_1	chr3	+	1499	9	ISM	ENSMUSG00000028048.12	ENSMUST00000077367.11	1779	11	0	692	0	-635	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAGAGAGCGCGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	89110234	89115294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130
ENSMUSG00000028048.12_89110350_89115667_1	chr3	+	1433	10	ISM	ENSMUSG00000028048.12	ENSMUST00000077367.11	1779	11	115	319	103	-262	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTGACTTGGAAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	89110349	89115667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618
ENSMUSG00000028048.12_89111342_89115988_1	chr3	+	1502	9	ISM	ENSMUSG00000028048.12	ENSMUST00000167998.2	1938	12	1095	0	42	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGTGCTATCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	89111341	89115988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ENSMUSG00000028048.12_89111414_89115988_1	chr3	+	1430	9	ISM	ENSMUSG00000028048.12	ENSMUST00000167998.2	1938	12	1167	0	114	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGTGCTATCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	89111413	89115988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ENSMUSG00000028048.12_89111423_89114574_1	chr3	+	644	5	ISM	ENSMUSG00000028048.12	ENST00000427500.7	1467	8	133	1474	123	-1355	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTCACTGGTATATGG	NA	NA	NA	NA	NA	NA	NA	NA	89111422	89114574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89111484_89112753_89112888_89113098_89113272_89113440_89113676_89114533
ENSMUSG00000028048.12_89111580_89115636_1	chr3	+	1048	7	ISM	ENSMUSG00000028048.12	ENST00000566701.5	1435	9	280	293	280	-293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGAGAGTGGCGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	89111579	89115636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114770_89115191_89115295_89115618
ENSMUSG00000028048.12_89111677_89115650_1	chr3	+	965	7	ISM	ENSMUSG00000028048.12	ENST00000566701.5	1435	9	377	279	377	-279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGTGGCCAGTGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	89111676	89115650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114770_89115191_89115295_89115618
ENSMUSG00000028048.12_89112792_89115886_1	chr3	+	1023	7	ISM	ENSMUSG00000028048.12	ENST00000566701.5	1435	9	1492	43	1492	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGCTACTCCATTCACA	NA	NA	NA	NA	NA	NA	NA	NA	89112791	89115886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89112888_89113098_89113272_89113440_89113676_89114533_89114770_89115191_89115295_89115618_89115736_89115823
ENSMUSG00000028048.12_89113093_89115988_1	chr3	+	1035	6	ISM	ENSMUSG00000028048.12	ENST00000566701.5	1435	9	1793	-59	1793	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGTGCTATCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	89113092	89115988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89113272_89113440_89113676_89114533_89114770_89115191_89115295_89115618_89115736_89115823
ENSMUSG00000028049.16_89084780_89088203_1	chr3	+	732	5	ISM	ENSMUSG00000028049.16	ENST00000355379.3	1472	8	59	1871	0	-1867	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGTGATGGAAGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	89084779	89088203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89084965_89086401_89086531_89086623_89086745_89087558_89087688_89088035
ENSMUSG00000028049.16_89084780_89088203_2	chr3	+	813	6	ISM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	-17	1869	0	-1867	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGTGATGGAAGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	89084779	89088203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035
ENSMUSG00000028049.16_89084928_89088583_1	chr3	+	759	7	ISM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	131	1489	101	-1487	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGAGCTACCATTCGT	NA	NA	NA	NA	NA	NA	NA	NA	89084927	89088583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481
ENSMUSG00000028049.16_89084928_89088583_2	chr3	+	678	6	ISM	ENSMUSG00000028049.16	ENST00000355379.3	1472	8	207	1491	101	-1487	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGAGCTACCATTCGT	NA	NA	NA	NA	NA	NA	NA	NA	89084927	89088583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89084965_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481
ENSMUSG00000028049.16_89085347_89089277_1	chr3	+	717	7	ISM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	550	795	520	-793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGTGCTCATGCTGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	89085346	89089277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232
ENSMUSG00000028049.16_89086482_89089639_1	chr3	+	713	7	ISM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	1685	433	1655	-431	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGAAGGCCCAGCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	89086481	89089639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ENSMUSG00000028049.16_89086662_89089715_1	chr3	+	702	6	ISM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	1865	357	1835	-355	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGGAGCTGCTGAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	89086661	89089715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ENSMUSG00000028049.16_89086712_89089768_1	chr3	+	705	6	ISM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	1915	304	1885	-302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCCCTGGGCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	89086711	89089768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ENSMUSG00000028049.16_89087644_89089880_1	chr3	+	699	5	ISM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	2847	192	2817	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCATGACTTTAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	89087643	89089880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ENSMUSG00000028049.16_89088481_89090072_1	chr3	+	688	3	ISM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	3684	0	3654	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCATTTCCTGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	89088480	89090072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89088584_89089232_89089351_89089605
ENSMUSG00000028057.15_88624145_88636517_1	chr3	+	687	6	FSM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	0	517	0	-346	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCGTCCGGGAGATCCG	NA	NA	NA	NA	NA	NA	NA	NA	88624144	88636517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_88624265_88624632_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
ENSMUSG00000028057.15_88624631_88636694_1	chr3	+	746	5	ISM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	486	340	418	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGAACTGCAGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	88624630	88636694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
ENSMUSG00000028057.15_88633301_88636855_1	chr3	+	704	3	ISM	ENSMUSG00000028057.15	ENSMUST00000172252.2	820	5	9088	8	9088	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGCATGAACTCATCAGG	NA	NA	NA	NA	NA	NA	NA	NA	88633300	88636855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88633376_88633586_88633779_88636418
ENSMUSG00000028057.15_88633669_88637035_1	chr3	+	727	2	ISM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	9524	-1	9456	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCCTTCAACCTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	88633668	88637035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88633779_88636418
ENSMUSG00000028059.17_88523450_88553544_1	chr3	+	3106	22	ISM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	0	1815	0	-626	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGACCGAGAGGCGCAA	NA	NA	NA	NA	NA	NA	NA	NA	88523449	88553544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483
ENSMUSG00000028059.17_88523450_88553600_1	chr3	+	3162	22	ISM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	0	1759	0	-570	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACCCTGATACTGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	88523449	88553600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483
ENSMUSG00000028059.17_88523684_88554179_1	chr3	+	3078	23	FSM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	234	1180	-140	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCACCCCCGCCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	88523683	88554179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUSG00000028059.17_88528599_88551392_1	chr3	+	2519	20	ISM	ENSMUSG00000028059.17	ENSMUST00000029694.14	4300	22	186	3967	0	-2778	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAAGAGATCCGCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	88528598	88551392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096
ENSMUSG00000028059.17_88539218_88554518_1	chr3	+	3098	20	ISM	ENSMUSG00000028059.17	ENSMUST00000107510.10	4390	22	10619	839	8990	282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGCCACACAGCCTAACA	NA	NA	NA	NA	NA	NA	NA	NA	88539217	88554518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUSG00000028059.17_88540564_88554839_1	chr3	+	3158	17	ISM	ENSMUSG00000028059.17	ENSMUST00000170653.9	4238	22	11821	516	10336	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTAGCTCCATATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	88540563	88554839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUSG00000028059.17_88541762_88555088_1	chr3	+	3104	15	ISM	ENSMUSG00000028059.17	ENSMUST00000170653.9	4238	22	13019	267	11534	249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAAATTTAATTGTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	88541761	88555088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUSG00000028059.17_88541825_88555136_1	chr3	+	3089	15	ISM	ENSMUSG00000028059.17	ENSMUST00000170653.9	4238	22	13082	219	11597	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAGAGAAAGAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	88541824	88555136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUSG00000028059.17_88542287_88555359_1	chr3	+	3172	14	ISM	ENSMUSG00000028059.17	ENSMUST00000170653.9	4238	22	13544	-4	12059	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	88542286	88555359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUSG00000028060.15_88593110_88607808_1	chr3	+	1202	10	NNC	ENSMUSG00000028060.15	novel	1158	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1577	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACTGGACAGGTAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	88593109	88607808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607671
ENSMUSG00000028060.15_88593650_88607808_1	chr3	+	1118	9	NNC	ENSMUSG00000028060.15	novel	1158	10	NA	NA	493	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1427	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACTGGACAGGTAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	88593649	88607808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607671
ENSMUSG00000028060.15_88593737_88607808_1	chr3	+	1027	9	NNC	ENSMUSG00000028060.15	novel	1158	10	NA	NA	580	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	426	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACTGGACAGGTAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	88593736	88607808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600885_88603871_88604084_88606155_88606217_88607257_88607316_88607668
ENSMUSG00000028060.15_88593737_88607808_2	chr3	+	1028	9	NNC	ENSMUSG00000028060.15	novel	1158	10	NA	NA	580	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACTGGACAGGTAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	88593736	88607808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_88593874_88596487_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607668
ENSMUSG00000028060.15_88593737_88607808_3	chr3	+	1029	9	NNC	ENSMUSG00000028060.15	novel	1158	10	NA	NA	580	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACTGGACAGGTAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	88593736	88607808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_88593874_88596481_88596611_88596935_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607668
ENSMUSG00000028062.16_88457126_88460331_1	chr3	-	662	4	NNC	ENSMUSG00000028062.16	novel	668	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCACCTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88460331	88457125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_88457306_88458002_88458093_88459661_88459825_88460102
ENSMUSG00000028062.16_88457285_88460166_1	chr3	-	254	3	FSM	ENSMUSG00000028062.16	ENST00000368304.9	372	3	24	94	0	-94	multi-exon	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCCCTCACCCAAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	88460166	88457284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_88457312_88459661_88459825_88460102
ENSMUSG00000028063.16_88388455_88393546_1	chr3	-	2024	8	ISM	ENSMUSG00000028063.16	ENSMUST00000029699.13	3156	12	17096	0	7073	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCTGTGGTGTCTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	88393546	88388454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88389408_88389652_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510
ENSMUSG00000028063.16_88388588_88393596_1	chr3	-	1941	8	ISM	ENSMUSG00000028063.16	ENSMUST00000029699.13	3156	12	17046	133	7023	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGGGCTGGTGAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	88393596	88388587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88389408_88389652_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510
ENSMUSG00000028063.16_88388703_88393845_1	chr3	-	1945	9	ISM	ENSMUSG00000028063.16	ENSMUST00000029699.13	3156	12	16797	248	6774	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTACCTTTTCCCAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	88393845	88388702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88389408_88389652_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766
ENSMUSG00000028063.16_88388822_88394156_1	chr3	-	1960	10	ISM	ENSMUSG00000028063.16	ENSMUST00000029699.13	3156	12	16486	367	6463	355	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCCTAGCCTGGGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	88394156	88388821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88389408_88389652_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114
ENSMUSG00000028063.16_88388881_88394201_1	chr3	-	1946	10	ISM	ENSMUSG00000028063.16	ENSMUST00000029699.13	3156	12	16441	426	6418	296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTCCCCGGCACTACAC	NA	NA	NA	NA	NA	NA	NA	NA	88394201	88388880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88389408_88389652_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114
ENSMUSG00000028063.16_88389021_88395726_1	chr3	-	1990	11	ISM	ENSMUSG00000028063.16	ENST00000361308.9	2477	13	15296	-156	4893	156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCATCCCAGGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	88395726	88389020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88389408_88389652_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581
ENSMUSG00000028063.16_88389153_88410115_1	chr3	-	1931	12	FSM	ENSMUSG00000028063.16	ENSMUST00000029699.13	3156	12	527	698	499	24	multi-exon	FALSE	canonical	NA	NA	NA	NA	3392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTATCTCAATCCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	88410115	88389152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_88389408_88389652_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
ENSMUSG00000028063.16_88389153_88410200_1	chr3	-	2016	12	FSM	ENSMUSG00000028063.16	ENSMUST00000029699.13	3156	12	442	698	414	24	multi-exon	FALSE	canonical	NA	NA	NA	NA	5678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTATCTCAATCCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	88410200	88389152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_88389408_88389652_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
ENSMUSG00000028063.16_88389384_88410276_1	chr3	-	1861	12	FSM	ENSMUSG00000028063.16	ENSMUST00000029699.13	3156	12	366	929	338	-136	multi-exon	FALSE	canonical	NA	NA	NA	NA	6586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGGGACCTGCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	88410276	88389383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_88389408_88389652_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
ENSMUSG00000028063.16_88389653_88410402_1	chr3	-	1963	11	FSM	ENSMUSG00000028063.16	ENST00000675667.1	2622	11	254	405	212	-405	multi-exon	FALSE	canonical	NA	NA	NA	NA	11399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCATCTCTGCCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	88410402	88389652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
ENSMUSG00000028063.16_88390513_88410115_1	chr3	-	1521	10	FSM	ENSMUSG00000028063.16	ENSMUST00000120377.8	2021	10	499	1	499	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGCCCTGGCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88410115	88390512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
ENSMUSG00000028063.16_88391133_88410276_1	chr3	-	1475	9	ISM	ENSMUSG00000028063.16	ENSMUST00000120377.8	2021	10	338	621	338	-620	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTATGTTGCAGCCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	88410276	88391132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
ENSMUSG00000028063.16_88391354_88410402_1	chr3	-	1480	8	ISM	ENSMUSG00000028063.16	ENSMUST00000120377.8	2021	10	212	842	212	-841	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGAAGGGCACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	88410402	88391353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
ENSMUSG00000028063.16_88391424_88410475_1	chr3	-	1483	8	ISM	ENSMUSG00000028063.16	ENSMUST00000120377.8	2021	10	139	912	139	-911	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACGATCCTTTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	88410475	88391423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
ENSMUSG00000028064.18_88355371_88359368_1	chr3	-	740	7	ISM	ENSMUSG00000028064.18	ENST00000355014.6	2827	13	1059	12094	1059	-12094	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGAGCTGAACAAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	88359368	88355370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88355449_88356986_88357160_88357294_88357420_88357817_88357935_88358651_88358758_88358994_88359094_88359326
ENSMUSG00000028069.17_87950819_87963046_1	chr3	+	1397	8	ISM	ENSMUSG00000028069.17	ENSMUST00000166021.8	1768	9	404	254	384	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATAGCCTGGTTTAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	87950818	87963046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87950909_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
ENSMUSG00000028070.8_87963827_87965802_1	chr3	-	901	6	NNC	ENSMUSG00000028070.8	novel	908	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	3007	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	87965802	87963826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_87964084_87964292_87964441_87965030_87965145_87965227_87965339_87965436_87965539_87965633
ENSMUSG00000028072.7_87685732_87687472_1	chr3	-	429	3	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	15017	12	14997	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGCTAGGAGCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	87687472	87685731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87685907_87686942_87687102_87687377
ENSMUSG00000028072.7_87685760_87687554_1	chr3	-	483	3	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	14935	40	14915	-40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGGCGCCACCCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	87687554	87685759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87685907_87686942_87687102_87687377
ENSMUSG00000028072.7_87685836_87687580_1	chr3	-	433	3	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	14909	116	14889	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGAGGCTGCTGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87687580	87685835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87685907_87686942_87687102_87687377
ENSMUSG00000028072.7_87687011_87688837_1	chr3	-	432	3	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	13652	1291	13632	-1291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGTGGTGCTCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	87688837	87687010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87687102_87687377_87687619_87688737
ENSMUSG00000028072.7_87687505_87689470_1	chr3	-	431	4	ISM	ENSMUSG00000028072.7	ENSMUST00000029712.5	2588	17	12999	1954	12999	-1785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGCCAGCCTGCACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	87689470	87687504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87687619_87688737_87688911_87689047_87689179_87689457
ENSMUSG00000028072.7_87687550_87689526_1	chr3	-	442	4	ISM	ENSMUSG00000028072.7	ENSMUST00000029712.5	2588	17	12943	1999	12943	-1830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCTGGCTGTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	87689526	87687549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87687619_87688737_87688911_87689047_87689179_87689457
ENSMUSG00000028072.7_87687600_87689578_1	chr3	-	444	4	ISM	ENSMUSG00000028072.7	ENSMUST00000029712.5	2588	17	12891	2049	12891	-1880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGGCTGGTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	87689578	87687599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87687619_87688737_87688911_87689047_87689179_87689457
ENSMUSG00000028072.7_87688808_87690134_1	chr3	-	484	4	ISM	ENSMUSG00000028072.7	ENSMUST00000029712.5	2588	17	12335	3257	12335	-3088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGAGGGTGGCCCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	87690134	87688807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87688911_87689047_87689179_87689457_87689605_87690031
ENSMUSG00000028072.7_87689060_87690997_1	chr3	-	446	5	ISM	ENSMUSG00000028072.7	ENST00000368196.7	2670	16	11573	3508	11472	-3340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTGTCAAGGTGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	87690997	87689059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87689179_87689457_87689605_87690031_87690135_87690380_87690437_87690976
ENSMUSG00000028072.7_87689121_87691044_1	chr3	-	432	5	ISM	ENSMUSG00000028072.7	ENST00000368196.7	2670	16	11526	3569	11425	-3401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAAAGGTCTTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	87691044	87689120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87689179_87689457_87689605_87690031_87690135_87690380_87690437_87690976
ENSMUSG00000028072.7_87689158_87691114_1	chr3	-	465	5	ISM	ENSMUSG00000028072.7	ENST00000368196.7	2670	16	11456	3606	11355	-3438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACATCATTCTCAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	87691114	87689157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87689179_87689457_87689605_87690031_87690135_87690380_87690437_87690976
ENSMUSG00000028072.7_87690031_87691306_1	chr3	-	490	3	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	11183	4311	11163	-4311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGGCAGCAGTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	87691306	87690030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87690135_87690380_87690437_87690976
ENSMUSG00000028072.7_87691052_87695679_1	chr3	-	444	3	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	6810	5332	6790	-5332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGGCTGCCGCCTCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	87695679	87691051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87691307_87693274_87693408_87695623
ENSMUSG00000028072.7_87691171_87695952_1	chr3	-	436	4	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	6537	5451	6517	-5451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCAGTTCTTGGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	87695952	87691170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87691307_87693274_87693408_87695623_87695767_87695928
ENSMUSG00000028072.7_87691227_87695998_1	chr3	-	426	4	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	6491	5507	6471	-5507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTCTCTGCGCTGGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	87695998	87691226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87691307_87693274_87693408_87695623_87695767_87695928
ENSMUSG00000028072.7_87691254_87696073_1	chr3	-	474	4	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	6416	5534	6396	-5534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCTCGGTGGACGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	87696073	87691253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87691307_87693274_87693408_87695623_87695767_87695928
ENSMUSG00000028072.7_87693373_87698710_1	chr3	-	429	5	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	3779	7653	3759	-7653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAATGTCACCAGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	87698710	87693372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87693408_87695623_87695767_87695928_87696081_87696923_87696993_87698680
ENSMUSG00000028072.7_87695720_87702292_1	chr3	-	468	6	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	197	10000	177	-10000	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGATGACGTGTTTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	87702292	87695719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87695767_87695928_87696081_87696923_87696993_87698680_87698753_87698976_87699052_87702239
ENSMUSG00000028072.7_87695973_87702342_1	chr3	-	427	5	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	147	10253	127	-10253	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGAGACCAGTTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	87702342	87695972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87696081_87696923_87696993_87698680_87698753_87698976_87699052_87702239
ENSMUSG00000028072.7_87696024_87702469_1	chr3	-	503	5	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	20	10304	0	-10304	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAGGAAGGGCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	87702469	87696023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_87696081_87696923_87696993_87698680_87698753_87698976_87699052_87702239
ENSMUSG00000028081.7_86045247_86048650_1	chr3	-	595	4	ISM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	1359	0	1359	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	86048650	86045246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545
ENSMUSG00000028081.7_86045247_86048733_1	chr3	-	678	4	ISM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	1276	0	1276	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12643	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	86048733	86045246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545
ENSMUSG00000028081.7_86045358_86049053_1	chr3	-	616	5	ISM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	956	111	956	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7689	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGGGTGCTAAGGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	86049053	86045357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004
ENSMUSG00000028081.7_86045845_86049882_1	chr3	-	624	5	ISM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	127	598	127	-598	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8663	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGACGTCTTTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	86049882	86045844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049814
ENSMUSG00000028081.7_86046346_86050009_1	chr3	-	697	4	ISM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	0	1099	0	-1099	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGCGTTTCTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	86050009	86046345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_86046556_86048545_86048734_86049004_86049109_86049814
ENSMUSG00000028081.7_86046425_86050009_1	chr3	-	618	4	ISM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	0	1178	0	-1178	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4728	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGATCCGGAAGAAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	86050009	86046424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_86046556_86048545_86048734_86049004_86049109_86049814
ENSMUSG00000028085.13_85481502_85561778_1	chr3	+	2242	13	FSM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	76	1151	68	-1151	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATTGTATAGTTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	85481501	85561778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
ENSMUSG00000028085.13_85483214_85561965_1	chr3	+	2261	12	ISM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	1788	964	1780	-964	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGCTACATCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	85483213	85561965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
ENSMUSG00000028085.13_85483254_85562032_1	chr3	+	2288	12	ISM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	1828	897	1820	-897	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCTCACTCTTTATGAC	NA	NA	NA	NA	NA	NA	NA	NA	85483253	85562032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
ENSMUSG00000028085.13_85509248_85562153_1	chr3	+	2260	11	ISM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	27822	776	27814	-776	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTGGGCACCATCATTC	NA	NA	NA	NA	NA	NA	NA	NA	85509247	85562153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
ENSMUSG00000028085.13_85511782_85562293_1	chr3	+	2273	10	ISM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	30356	636	30348	-636	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTCAGACAAGCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	85511781	85562293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
ENSMUSG00000028085.13_85511853_85562348_1	chr3	+	2257	10	ISM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	30427	581	30419	-581	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGACCATGTGTTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	85511852	85562348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
ENSMUSG00000028085.13_85526254_85562929_1	chr3	+	2314	5	ISM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	44828	0	44820	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGTGCAGTGAAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	85526253	85562929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
ENSMUSG00000028086.16_84810236_84811393_1	chr3	+	625	2	NNC	ENSMUSG00000028086.16	novel	629	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTAGTCCCCTTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	84810235	84811393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_84810286_84810818
ENSMUSG00000028086.16_84810236_84811393_2	chr3	+	629	2	FSM	ENSMUSG00000028086.16	ENST00000604872.6	629	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTAGTCCCCTTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	84810235	84811393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_84810279_84810807
ENSMUSG00000028089.6_97469972_97491241_1	chr3	-	1280	10	FSM	ENSMUSG00000028089.6	ENST00000652587.1	1361	10	0	81	0	-81	multi-exon	FALSE	canonical	NA	NA	NA	NA	2670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGGGTTTTAACTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	97491241	97469971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123
ENSMUSG00000028089.6_97469972_97491241_2	chr3	-	1273	10	NNC	ENSMUSG00000028089.6	novel	1361	10	NA	NA	0	-81	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1032	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGGGTTTTAACTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	97491241	97469971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_97470004_97470772_97470888_97474074_97474139_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123
ENSMUSG00000028089.6_97469972_97491241_3	chr3	-	1277	10	NNC	ENSMUSG00000028089.6	novel	1361	10	NA	NA	0	-81	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGGGTTTTAACTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	97491241	97469971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488321_97488494_97490032_97490187_97491123
ENSMUSG00000028089.6_97469972_97501449_1	chr3	-	1934	16	FSM	ENSMUSG00000028089.6	ENST00000361293.10	2043	16	28	81	28	-81	multi-exon	FALSE	canonical	NA	NA	NA	NA	3703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGGGTTTTAACTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	97501449	97469971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323
ENSMUSG00000028093.16_97066093_97083109_1	chr3	+	1510	9	ISM	ENSMUSG00000028093.16	ENSMUST00000090759.5	1754	10	0	781	0	-781	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATCTCTGAGGCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	97066092	97083109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943
ENSMUSG00000028093.16_97066205_97083109_1	chr3	+	1398	9	ISM	ENSMUSG00000028093.16	ENSMUST00000090759.5	1754	10	112	781	112	-781	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATCTCTGAGGCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	97066204	97083109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943
ENSMUSG00000028093.16_97066412_97083890_1	chr3	+	1435	10	FSM	ENSMUSG00000028093.16	ENSMUST00000090759.5	1754	10	319	0	319	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTTTTGCCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	97066411	97083890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ENSMUSG00000028096.14_96778802_96804754_1	chr3	-	1159	12	FSM	ENSMUSG00000028096.14	ENST00000407924.2	1258	12	0	99	0	-99	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTGATGTCATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	96804754	96778801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789862_96789945_96797224_96797306_96798118_96798240_96800181_96800303_96800815_96800921_96804648
ENSMUSG00000028098.14_96635155_96691036_1	chr3	+	474	5	ISM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	175	7432	175	-7432	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGACCATTCTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	96635154	96691036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963
ENSMUSG00000028098.14_96661656_96692339_1	chr3	+	427	5	ISM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	26676	6129	26676	-6129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTGGGGTCAGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	96661655	96692339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308
ENSMUSG00000028098.14_96682962_96695912_1	chr3	+	462	5	ISM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	47982	2556	47982	-2556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGATTACACAGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	96682961	96695912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885
ENSMUSG00000028098.14_96683120_96697239_1	chr3	+	442	6	ISM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	48140	1229	48140	-1229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGGCAAACCCAGAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	96683119	96697239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ENSMUSG00000028099.9_96619074_96633232_1	chr3	-	1759	14	ISM	ENSMUSG00000028099.9	ENSMUST00000154679.8	2406	15	1525	235	64	208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTGGATGTCCTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	96633232	96619073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149
ENSMUSG00000028099.9_96619143_96633267_1	chr3	-	1725	14	ISM	ENSMUSG00000028099.9	ENSMUST00000154679.8	2406	15	1490	304	29	139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTAGATGAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	96633267	96619142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149
ENSMUSG00000028099.9_96619281_96633293_1	chr3	-	1304	11	NNC	ENSMUSG00000028099.9	novel	1313	11	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGATCAAACTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	96633293	96619280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_96619377_96622435_96622587_96622949_96623011_96623751_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149
ENSMUSG00000028099.9_96619281_96633293_2	chr3	-	1303	11	NNC	ENSMUSG00000028099.9	novel	1313	11	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGATCAAACTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	96633293	96619280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_96619377_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624056_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149
ENSMUSG00000028099.9_96619281_96633293_3	chr3	-	1305	11	NNC	ENSMUSG00000028099.9	novel	1313	11	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGATCAAACTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	96633293	96619280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_96619377_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629936_96630829_96631016_96631112_96631369_96633149
ENSMUSG00000028099.9_96619281_96633293_4	chr3	-	1311	11	FSM	ENSMUSG00000028099.9	ENST00000369294.5	1313	11	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGATCAAACTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	96633293	96619280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_96619377_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149
ENSMUSG00000028099.9_96619281_96633293_5	chr3	-	1303	11	NNC	ENSMUSG00000028099.9	novel	1313	11	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGATCAAACTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	96633293	96619280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_96619377_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631008_96631112_96631369_96633149
ENSMUSG00000028099.9_96619281_96633293_6	chr3	-	1307	11	NNC	ENSMUSG00000028099.9	novel	1313	11	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGATCAAACTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	96633293	96619280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_96619377_96622435_96622587_96622949_96623011_96623744_96623793_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149
ENSMUSG00000028099.9_96619281_96633293_7	chr3	-	1306	11	NNC	ENSMUSG00000028099.9	novel	1313	11	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGATCAAACTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	96633293	96619280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_96619377_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626638_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149
ENSMUSG00000028099.9_96619281_96634757_1	chr3	-	1728	15	FSM	ENSMUSG00000028099.9	ENSMUST00000029741.9	2390	15	187	475	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGATCAAACTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	96634757	96619280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
ENSMUSG00000028099.9_96620831_96634944_1	chr3	-	1785	14	ISM	ENSMUSG00000028099.9	ENSMUST00000029741.9	2390	15	0	2025	0	-1549	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGCTGGAGACACTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	96634944	96620830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
ENSMUSG00000028100.12_96612893_96613753_1	chr3	-	570	2	ISM	ENSMUSG00000028100.12	ENST00000334513.6	1417	7	2070	44	2070	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAATCTGCAATCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	96613753	96612892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_96613367_96613657
ENSMUSG00000028100.12_96612928_96613822_1	chr3	-	604	2	ISM	ENSMUSG00000028100.12	ENST00000334513.6	1417	7	2001	79	2001	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATGCTTTGGAGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	96613822	96612927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_96613367_96613657
ENSMUSG00000028100.12_96613127_96614559_1	chr3	-	606	4	ISM	ENSMUSG00000028100.12	ENST00000334513.6	1417	7	1264	278	1264	256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCCAGGCCTGAACACAG	NA	NA	NA	NA	NA	NA	NA	NA	96614559	96613126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_96613367_96613657_96613845_96614225_96614363_96614517
ENSMUSG00000028100.12_96613183_96614593_1	chr3	-	584	4	ISM	ENSMUSG00000028100.12	ENST00000334513.6	1417	7	1230	334	1230	200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAGTATTGGGGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	96614593	96613182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_96613367_96613657_96613845_96614225_96614363_96614517
ENSMUSG00000028100.12_96613704_96615391_1	chr3	-	573	5	ISM	ENSMUSG00000028100.12	ENST00000334513.6	1417	7	432	855	432	-220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACATCTGGGCAGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	96615391	96613703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615288
ENSMUSG00000028100.12_96613817_96615665_1	chr3	-	582	6	ISM	ENSMUSG00000028100.12	ENST00000334513.6	1417	7	158	968	158	-333	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAACCTCTGGTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	96615665	96613816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615288_96615492_96615643
ENSMUSG00000028100.12_96614517_96615855_1	chr3	-	608	4	ISM	ENSMUSG00000028100.12	ENST00000334513.6	1417	7	-32	1668	0	-1033	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTTGGCGGTAGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	96615855	96614516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_96614617_96614873_96614967_96615288_96615492_96615643
ENSMUSG00000028101.19_96603758_96607835_1	chr3	+	675	5	ISM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	58	5443	58	-5443	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACTATTTCCCCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	96603757	96607835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804
ENSMUSG00000028101.19_96607071_96609744_1	chr3	+	697	8	ISM	ENSMUSG00000028101.19	ENSMUST00000107077.4	2695	15	2638	3545	2638	-3534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATCTACAGATGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	96607070	96609744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672
ENSMUSG00000028101.19_96607122_96609812_1	chr3	+	714	8	ISM	ENSMUSG00000028101.19	ENSMUST00000107077.4	2695	15	2689	3477	2689	-3466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCGCTGATTATTGATG	NA	NA	NA	NA	NA	NA	NA	NA	96607121	96609812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672
ENSMUSG00000028101.19_96607531_96610975_1	chr3	+	755	7	ISM	ENSMUSG00000028101.19	ENSMUST00000107077.4	2695	15	3098	2314	3098	-2303	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGACCCCCTGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	96607530	96610975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841
ENSMUSG00000028101.19_96608950_96611470_1	chr3	+	722	6	ISM	ENSMUSG00000028101.19	ENSMUST00000107077.4	2695	15	4517	1819	4517	-1808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCCACCTGCCTTCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	96608949	96611470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374
ENSMUSG00000028101.19_96609520_96611702_1	chr3	+	680	6	ISM	ENSMUSG00000028101.19	ENSMUST00000107077.4	2695	15	5087	1587	5087	-1576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGCCATGTTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	96609519	96611702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664
ENSMUSG00000028101.19_96609688_96612222_1	chr3	+	679	6	ISM	ENSMUSG00000028101.19	ENSMUST00000107077.4	2695	15	5255	1067	5255	-1056	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTACCGGGGAACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	96609687	96612222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ENSMUSG00000028101.19_96610859_96612449_1	chr3	+	743	5	ISM	ENSMUSG00000028101.19	ENSMUST00000107077.4	2695	15	6426	840	6426	-829	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCTCCATTGGCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	96610858	96612449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ENSMUSG00000028101.19_96610905_96612449_1	chr3	+	697	5	ISM	ENSMUSG00000028101.19	ENSMUST00000107077.4	2695	15	6472	840	6472	-829	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCTCCATTGGCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	96610904	96612449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ENSMUSG00000028101.19_96611482_96612790_1	chr3	+	691	3	ISM	ENSMUSG00000028101.19	ENSMUST00000107077.4	2695	15	7049	499	7049	-488	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCTGGTCTTTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	96611481	96612790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96611509_96611664_96611703_96612164
ENSMUSG00000028102.16_96542988_96550931_1	chr3	+	431	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	242	1751	0	-1111	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGAGATTCGCCTATTG	NA	NA	NA	NA	NA	NA	NA	NA	96542987	96550931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
ENSMUSG00000028102.16_96543149_96552042_1	chr3	+	1568	4	NNC	ENSMUSG00000028102.16	novel	1562	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTTTATTCAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	96543148	96552042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_96543247_96543989_96544106_96544446_96544649_96550890
ENSMUSG00000028104.15_96485188_96489089_1	chr3	-	1161	6	ISM	ENSMUSG00000028104.15	ENSMUST00000091924.10	1427	8	12408	0	484	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTAACAGAGTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	96489089	96485187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959
ENSMUSG00000028104.15_96485318_96489453_1	chr3	-	1081	7	ISM	ENSMUSG00000028104.15	ENSMUST00000091924.10	1427	8	12044	130	120	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACCTGTGTGATCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	96489453	96485317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96489403
ENSMUSG00000028104.15_96485460_96501475_1	chr3	-	1133	8	FSM	ENSMUSG00000028104.15	ENSMUST00000091924.10	1427	8	22	272	0	-272	multi-exon	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAACTCGGTATGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	96501475	96485459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96489403_96489572_96501399
ENSMUSG00000028104.15_96485818_96489573_1	chr3	-	625	6	NNC	ENSMUSG00000028104.15	novel	633	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTGGGCATAGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	96489573	96485817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_96485905_96487113_96487221_96487331_96487406_96487765_96487823_96488959_96489090_96489403
ENSMUSG00000028104.15_96485818_96489573_2	chr3	-	630	6	NNC	ENSMUSG00000028104.15	novel	633	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	873	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTGGGCATAGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	96489573	96485817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488961_96489090_96489403
ENSMUSG00000028104.15_96485818_96489573_3	chr3	-	630	6	NNC	ENSMUSG00000028104.15	novel	633	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTGGGCATAGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	96489573	96485817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488959_96489090_96489405
ENSMUSG00000028104.15_96485818_96489573_4	chr3	-	632	6	FSM	ENSMUSG00000028104.15	ENST00000369313.7	633	6	0	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTGGGCATAGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	96489573	96485817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488959_96489090_96489403
ENSMUSG00000028107.15_95647482_95661702_1	chr3	-	1369	12	FSM	ENSMUSG00000028107.15	ENST00000438568.6	1479	12	110	0	110	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCCATTGGTGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	95661702	95647481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95657650_95657730_95658817_95658898_95661630
ENSMUSG00000028107.15_95647482_95661702_2	chr3	-	1363	12	NNC	ENSMUSG00000028107.15	novel	1479	12	NA	NA	110	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCCATTGGTGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	95661702	95647481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654963_95657650_95657730_95658817_95658898_95661630
ENSMUSG00000028107.15_95647542_95661702_1	chr3	-	1302	12	NNC	ENSMUSG00000028107.15	novel	1479	12	NA	NA	110	-60	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGACTGCTGGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	95661702	95647541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653476_95653846_95654010_95654750_95654969_95657650_95657730_95658817_95658898_95661630
ENSMUSG00000028107.15_95647542_95661702_2	chr3	-	1309	12	FSM	ENSMUSG00000028107.15	ENST00000438568.6	1479	12	110	60	110	-60	multi-exon	FALSE	canonical	NA	NA	NA	NA	2695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGACTGCTGGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	95661702	95647541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95657650_95657730_95658817_95658898_95661630
ENSMUSG00000028107.15_95647542_95661784_1	chr3	-	1385	12	NNC	ENSMUSG00000028107.15	novel	1479	12	NA	NA	28	-60	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1950	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGACTGCTGGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	95661784	95647541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654963_95657650_95657730_95658817_95658898_95661630
ENSMUSG00000028107.15_95647542_95661784_2	chr3	-	1391	12	FSM	ENSMUSG00000028107.15	ENST00000438568.6	1479	12	28	60	28	-60	multi-exon	FALSE	canonical	NA	NA	NA	NA	3106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGACTGCTGGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	95661784	95647541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95657650_95657730_95658817_95658898_95661630
ENSMUSG00000028107.15_95653945_95661701_1	chr3	-	1111	10	ISM	ENSMUSG00000028107.15	ENSMUST00000074339.13	2313	17	473	6657	111	-2780	internal_fragment	TRUE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCATCGGGCTGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	95661701	95653944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630
ENSMUSG00000028108.17_95641459_95646856_1	chr3	-	1867	11	NNC	ENSMUSG00000028108.17	novel	1901	11	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTTGTCTTTAGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	95646856	95641458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_95641784_95642134_95642223_95642510_95642732_95643158_95643528_95643783_95644104_95644324_95644367_95644944_95645026_95645119_95645201_95645323_95645429_95645550_95645614_95646684
ENSMUSG00000028108.17_95641459_95646856_2	chr3	-	1868	11	NNC	ENSMUSG00000028108.17	novel	1901	11	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTTGTCTTTAGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	95646856	95641458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_95641784_95642134_95642223_95642510_95642732_95643158_95643534_95643783_95644104_95644324_95644370_95644944_95645026_95645119_95645201_95645323_95645429_95645550_95645606_95646684
ENSMUSG00000028108.17_95641459_95646856_3	chr3	-	1868	11	NNC	ENSMUSG00000028108.17	novel	1901	11	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTTGTCTTTAGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	95646856	95641458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_95641784_95642134_95642223_95642510_95642732_95643158_95643534_95643783_95644099_95644324_95644367_95644944_95645026_95645119_95645201_95645323_95645429_95645550_95645614_95646684
ENSMUSG00000028108.17_95641459_95646856_4	chr3	-	1866	11	NNC	ENSMUSG00000028108.17	novel	1901	11	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTTGTCTTTAGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	95646856	95641458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_95641784_95642134_95642216_95642510_95642732_95643158_95643534_95643783_95644104_95644324_95644367_95644944_95645026_95645119_95645201_95645323_95645429_95645550_95645614_95646684
ENSMUSG00000028108.17_95641459_95646881_1	chr3	-	1892	11	NNC	ENSMUSG00000028108.17	novel	1901	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTTGTCTTTAGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	95646881	95641458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_95641784_95642134_95642223_95642510_95642726_95643158_95643534_95643783_95644104_95644324_95644367_95644944_95645026_95645119_95645201_95645323_95645429_95645550_95645614_95646684
ENSMUSG00000028108.17_95641459_95646881_2	chr3	-	1896	11	NNC	ENSMUSG00000028108.17	novel	1901	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTTGTCTTTAGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	95646881	95641458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_95641784_95642134_95642223_95642510_95642732_95643158_95643534_95643783_95644104_95644324_95644370_95644944_95645026_95645119_95645196_95645323_95645429_95645550_95645614_95646684
ENSMUSG00000028109.15_95469816_95495073_2	chr3	+	1408	11	NNC	ENSMUSG00000028109.15	novel	1556	11	NA	NA	26	91	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTCTGACTTTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	95469815	95495073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_95469936_95473931_95473996_95474994_95475032_95482816_95482914_95483588_95483740_95485363_95485618_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_95469816_95495073_3	chr3	+	1420	10	NNC	ENSMUSG00000028109.15	novel	1569	11	NA	NA	26	91	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTCTGACTTTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	95469815	95495073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_95469936_95473931_95473996_95482768_95482914_95483587_95483740_95485363_95485618_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_95469816_95495073_4	chr3	+	1409	11	NIC	ENSMUSG00000028109.15	novel	1556	11	NA	NA	26	91	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTCTGACTTTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	95469815	95495073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_+_95469936_95473931_95473996_95474994_95475032_95482816_95482914_95483587_95483740_95485363_95485618_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_95469816_95495191_1	chr3	+	1527	11	NIC	ENSMUSG00000028109.15	novel	1556	11	NA	NA	26	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTTTTTAATATTTA	NA	NA	NA	NA	NA	NA	NA	NA	95469815	95495191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_+_95469936_95473931_95473996_95474994_95475032_95482816_95482914_95483587_95483740_95485363_95485618_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_95469859_95494761_1	chr3	+	1071	11	FSM	ENSMUSG00000028109.15	ENST00000361824.7	1569	11	69	429	69	-142	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCTAAAAATTATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	95469858	95494761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95469936_95473931_95473996_95474994_95475032_95482799_95482914_95483587_95483740_95485363_95485618_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_95473931_95494903_1	chr3	+	1137	10	ISM	ENSMUSG00000028109.15	ENST00000361824.7	1569	11	4141	287	4141	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATATTGTGTTTACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	95473930	95494903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95473996_95474994_95475032_95482799_95482914_95483587_95483740_95485363_95485618_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_95473931_95495191_1	chr3	+	1410	10	NNC	ENSMUSG00000028109.15	novel	1556	11	NA	NA	4141	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTTTTTAATATTTA	NA	NA	NA	NA	NA	NA	NA	NA	95473930	95495191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_95473996_95474994_95475036_95482816_95482914_95483587_95483740_95485363_95485616_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_95473931_95495191_3	chr3	+	1412	10	ISM	ENSMUSG00000028109.15	ENST00000322343.11	1556	11	4141	-1	4141	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTTTTTAATATTTA	NA	NA	NA	NA	NA	NA	NA	NA	95473930	95495191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95473996_95474994_95475036_95482816_95482914_95483587_95483740_95485363_95485618_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028111.5_95408146_95413940_1	chr3	+	467	4	ISM	ENSMUSG00000028111.5	ENST00000679260.1	850	6	4	2368	4	-2368	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAACGAGAAAGCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	95408145	95413940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95408266_95408657_95408781_95408861_95409018_95413872
ENSMUSG00000028111.5_95408188_95413999_1	chr3	+	484	4	ISM	ENSMUSG00000028111.5	ENST00000679260.1	850	6	46	2309	46	-2309	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGATGCAAGCTTGGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	95408187	95413999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95408266_95408657_95408781_95408861_95409018_95413872
ENSMUSG00000028111.5_95408239_95414251_1	chr3	+	500	5	ISM	ENSMUSG00000028111.5	ENST00000679260.1	850	6	97	2057	97	-2057	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAATGTGAACCATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	95408238	95414251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95408266_95408657_95408781_95408861_95409018_95413872_95414039_95414223
ENSMUSG00000028111.5_95408656_95414329_1	chr3	+	553	4	ISM	ENSMUSG00000028111.5	ENST00000679260.1	850	6	514	1979	514	-1979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACACTGACCTTGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	95408655	95414329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95408781_95408861_95409018_95413872_95414039_95414223
ENSMUSG00000028111.5_95408763_95416160_1	chr3	+	473	5	ISM	ENSMUSG00000028111.5	ENST00000679260.1	850	6	621	148	621	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCTCTCTTGGCTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	95408762	95416160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95408781_95408861_95409018_95413872_95414039_95414223_95414330_95416133
ENSMUSG00000028111.5_95408906_95416226_1	chr3	+	477	4	ISM	ENSMUSG00000028111.5	ENST00000679260.1	850	6	764	82	764	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGATTCCAGCCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	95408905	95416226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95409018_95413872_95414039_95414223_95414330_95416133
ENSMUSG00000028111.5_95408962_95416271_1	chr3	+	466	4	ISM	ENSMUSG00000028111.5	ENST00000679260.1	850	6	820	37	820	-37	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGGTGCAAGATATTGG	NA	NA	NA	NA	NA	NA	NA	NA	95408961	95416271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95409018_95413872_95414039_95414223_95414330_95416133
ENSMUSG00000028114.17_123162591_123165006_1	chr3	-	832	2	ISM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	14751	645	14574	-645	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGAGTTCCCAGAACTC	NA	NA	NA	NA	NA	NA	NA	NA	123165006	123162590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_123163340_123164923
ENSMUSG00000028114.17_123162650_123165063_1	chr3	-	830	2	ISM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	14694	704	14517	-704	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAAAAAGAGAAGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	123165063	123162649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_123163340_123164923
ENSMUSG00000028114.17_123162784_123166287_1	chr3	-	849	3	ISM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	13470	838	13293	-838	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGAGGAGTGGCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	123166287	123162783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_123163340_123164923_123165135_123166205
ENSMUSG00000028114.17_123162908_123167683_1	chr3	-	825	4	ISM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	12074	962	11897	-962	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCACAGACTGAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	123167683	123162907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618
ENSMUSG00000028114.17_123163019_123167711_1	chr3	-	742	4	ISM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	12046	1073	11869	-1073	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCACAGTGGAGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	123167711	123163018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618
ENSMUSG00000028114.17_123163121_123169884_1	chr3	-	873	6	ISM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	9873	1175	9696	-1175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCGATCCAATTTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	123169884	123163120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793
ENSMUSG00000028114.17_123163295_123174363_1	chr3	-	854	8	ISM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	5394	1349	5217	-1349	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAACATATGCATCGTAT	NA	NA	NA	NA	NA	NA	NA	NA	123174363	123163294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296
ENSMUSG00000028114.17_123164923_123176491_1	chr3	-	912	8	ISM	ENSMUSG00000028114.17	ENSMUST00000174323.6	4202	10	3143	2977	3089	-2977	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACCTCAGTTTTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	123176491	123164922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403
ENSMUSG00000028114.17_123165061_123177298_1	chr3	-	828	9	ISM	ENSMUSG00000028114.17	ENSMUST00000174323.6	4202	10	2336	3115	2282	-3115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGACTTAATTATCACAG	NA	NA	NA	NA	NA	NA	NA	NA	123177298	123165060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244
ENSMUSG00000028114.17_123166250_123179580_1	chr3	-	915	9	ISM	ENSMUSG00000028114.17	ENSMUST00000174323.6	4202	10	54	4304	0	-4304	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAAAGACTCTAGATCCA	NA	NA	NA	NA	NA	NA	NA	NA	123179580	123166249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
ENSMUSG00000028121.9_122213588_122220228_1	chr3	+	380	2	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	161	103612	161	-103612	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGACGTGTCTATACAT	NA	NA	NA	NA	NA	NA	NA	NA	122213587	122220228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122213833_122220093
ENSMUSG00000028121.9_122213645_122220273_1	chr3	+	368	2	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	218	103567	218	-103567	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCCTTCCATACGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	122213644	122220273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122213833_122220093
ENSMUSG00000028121.9_122220238_122301831_1	chr3	+	392	4	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	6811	22009	6811	-22009	internal_fragment	TRUE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCGGAAACTTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	122220237	122301831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122220404_122248701_122248742_122298575_122298705_122301774
ENSMUSG00000028121.9_122220292_122301895_1	chr3	+	402	4	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	6865	21945	6865	-21945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTCCTGCGGCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	122220291	122301895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122220404_122248701_122248742_122298575_122298705_122301774
ENSMUSG00000028121.9_122220357_122301933_1	chr3	+	375	4	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	6930	21907	6930	-21907	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTACCAATTCGAGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	122220356	122301933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122220404_122248701_122248742_122298575_122298705_122301774
ENSMUSG00000028121.9_122301875_122304887_1	chr3	+	366	2	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	88448	18953	88448	-18953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCCGCCTGCCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	122301874	122304887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122302221_122304867
ENSMUSG00000028121.9_122302071_122306113_1	chr3	+	368	3	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	88644	17727	88644	-17727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGATGCTAGGACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	122302070	122306113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122302221_122304867_122304972_122305999
ENSMUSG00000028121.9_122306332_122312969_1	chr3	+	379	2	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	92905	10871	92905	-10871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGAGCTCATTACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	122306331	122312969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122306653_122312911
ENSMUSG00000028121.9_122306587_122318607_1	chr3	+	389	4	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	93160	5233	93160	-5233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCACTACACGCAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	122306586	122318607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122306653_122312911_122313028_122316817_122316990_122318572
ENSMUSG00000028124.16_122039317_122055576_1	chr3	+	589	3	ISM	ENSMUSG00000028124.16	ENST00000615724.1	1794	6	8	5179	0	-4508	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCAGAAATTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	122039316	122055576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122039761_122052855_122052941_122055516
ENSMUSG00000028124.16_122039361_122058519_1	chr3	+	891	6	ISM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	155	5862	44	-1565	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGACATACAGCTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	122039360	122058519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442
ENSMUSG00000028124.16_122039472_122056388_1	chr3	+	574	4	ISM	ENSMUSG00000028124.16	ENST00000615724.1	1794	6	163	4367	155	-3696	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTATAGGCACCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	122039471	122056388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122039761_122052855_122052941_122055516_122055577_122056248
ENSMUSG00000028124.16_122039637_122060084_1	chr3	+	861	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	431	4297	320	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGGAACATAAGATACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	122039636	122060084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ENSMUSG00000028124.16_122039637_122060145_1	chr3	+	922	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	431	4236	320	61	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCGCCTTACAAGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	122039636	122060145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ENSMUSG00000028124.16_122039730_122059918_1	chr3	+	536	6	FSM	ENSMUSG00000028124.16	ENST00000615724.1	1794	6	421	837	413	-166	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCCCTGACATTGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	122039729	122059918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_122039761_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ENSMUSG00000028124.16_122052854_122060309_1	chr3	+	898	5	ISM	ENSMUSG00000028124.16	ENSMUST00000178826.8	1002	8	13537	-225	13537	225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCAATATATTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	122052853	122060309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ENSMUSG00000028124.16_122056391_122060309_1	chr3	+	609	3	ISM	ENSMUSG00000028124.16	ENSMUST00000178826.8	1002	8	17074	-225	17074	225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCAATATATTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	122056390	122060309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122056452_122058442_122058558_122059876
ENSMUSG00000028124.16_122056391_122060592_1	chr3	+	892	3	ISM	ENSMUSG00000028124.16	ENST00000615724.1	1794	6	17082	163	17074	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATGTGTGTGTTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	122056390	122060592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122056452_122058442_122058558_122059876
ENSMUSG00000028126.17_94966699_94974760_1	chr3	-	1076	6	ISM	ENSMUSG00000028126.17	ENST00000368890.8	3126	14	39112	824	39112	585	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTTAGGAGAGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	94974760	94966698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94967397_94967794_94967841_94970965_94971096_94972731_94972817_94973122_94973172_94974692
ENSMUSG00000028126.17_94966863_94975556_1	chr3	-	1113	7	ISM	ENSMUSG00000028126.17	ENST00000368890.8	3126	14	38316	988	38316	421	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGCCAGTCTCAGATA	NA	NA	NA	NA	NA	NA	NA	NA	94975556	94966862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94967397_94967794_94967841_94970965_94971096_94972731_94972817_94973122_94973172_94974692_94974777_94975371
ENSMUSG00000028126.17_94967078_94978196_1	chr3	-	1093	8	ISM	ENSMUSG00000028126.17	ENST00000368890.8	3126	14	35676	1203	35676	206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTACCTTTCTCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	94978196	94967077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94967397_94967794_94967841_94970965_94971096_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022
ENSMUSG00000028126.17_94967314_94979295_1	chr3	-	1078	9	ISM	ENSMUSG00000028126.17	ENST00000368890.8	3126	14	34577	1439	34577	-30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCGTCTTCTTGGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	94979295	94967313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94967397_94967794_94967841_94970965_94971096_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200
ENSMUSG00000028126.17_94970966_94979831_1	chr3	-	1125	8	ISM	ENSMUSG00000028126.17	ENST00000368890.8	3126	14	34041	5091	34041	-3682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTTGACCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	94979831	94970965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94971096_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713
ENSMUSG00000028127.11_121553252_121562299_1	chr3	-	898	4	ISM	ENSMUSG00000028127.11	ENSMUST00000197383.5	3156	19	46516	829	46516	-696	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCAGTCCGCTGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	121562299	121553251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270
ENSMUSG00000028127.11_121553405_121563043_1	chr3	-	969	6	ISM	ENSMUSG00000028127.11	ENSMUST00000197383.5	3156	19	45772	982	45772	-849	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACATATTCCATCGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	121563043	121553404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000
ENSMUSG00000028127.11_121553621_121565987_1	chr3	-	890	8	ISM	ENSMUSG00000028127.11	ENSMUST00000197383.5	3156	19	42828	1198	42828	-1065	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAATTGGGCTTAAATC	NA	NA	NA	NA	NA	NA	NA	NA	121565987	121553620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951
ENSMUSG00000028127.11_121553849_121569164_1	chr3	-	940	11	ISM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	39787	1293	39651	-1293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGATAATGAACAGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	121569164	121553848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079
ENSMUSG00000028127.11_121555064_121569363_1	chr3	-	935	11	ISM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	39588	2508	39452	-2508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTATTTCTTCCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	121569363	121555063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265
ENSMUSG00000028127.11_121558682_121569515_1	chr3	-	911	11	ISM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	39436	6126	39300	-6126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGACTACATTTACAGC	NA	NA	NA	NA	NA	NA	NA	NA	121569515	121558681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450
ENSMUSG00000028127.11_121562347_121573256_1	chr3	-	890	12	ISM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	35695	9791	35559	-9791	internal_fragment	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCGAGAAGGCGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	121573256	121562346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203
ENSMUSG00000028127.11_121563013_121575633_1	chr3	-	891	11	ISM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	33318	10457	33182	-10457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCCTCAGGTAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	121575633	121563012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576
ENSMUSG00000028127.11_121567636_121578192_1	chr3	-	892	10	ISM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	30759	15080	30623	-15080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACTGGGAAAGGCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	121578192	121567635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121
ENSMUSG00000028127.11_121567834_121585406_1	chr3	-	895	11	ISM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	23545	15278	23409	-15278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCAGATATGAACGTAC	NA	NA	NA	NA	NA	NA	NA	NA	121585406	121567833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382
ENSMUSG00000028127.11_121573251_121608873_1	chr3	-	886	9	ISM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	78	20695	-58	-20695	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACGAAGGAGAATACAGATA	NA	NA	NA	NA	NA	NA	NA	NA	121608873	121573250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
ENSMUSG00000028128.14_121517393_121523032_1	chr3	+	212	3	ISM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	207	5665	207	-5665	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGTGCGACCTCACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	121517392	121523032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_121517452_121518625_121518732_121522985
ENSMUSG00000028128.14_121523196_121525351_1	chr3	+	187	2	ISM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	6010	3346	6010	-3346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGATTTTCCATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	121523195	121525351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_121523204_121525172
ENSMUSG00000028128.14_121525310_121527782_1	chr3	+	230	3	ISM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	8124	915	8124	-915	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGGCCACCATCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	121525309	121527782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_121525352_121526029_121526190_121527754
ENSMUSG00000028128.14_121526028_121527809_1	chr3	+	217	2	ISM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	8842	888	8842	-888	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCCATATCTCTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	121526027	121527809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_121526190_121527754
ENSMUSG00000028128.14_121526082_121527861_1	chr3	+	215	2	ISM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	8896	836	8896	-836	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACACCCCGTCGCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	121526081	121527861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_121526190_121527754
ENSMUSG00000028128.14_121526138_121527910_1	chr3	+	208	2	ISM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	8952	787	8952	-787	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACACTGCCTGCACGGC	NA	NA	NA	NA	NA	NA	NA	NA	121526137	121527910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_121526190_121527754
ENSMUSG00000028133.18_120949514_120952904_1	chr3	-	1042	3	ISM	ENSMUSG00000028133.18	ENSMUST00000039761.12	1145	4	12439	0	12433	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATGATTTCTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	120952904	120949513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_120949952_120950049_120950166_120952416
ENSMUSG00000028134.12_119512082_119514654_1	chr3	-	2323	3	ISM	ENSMUSG00000028134.12	ENSMUST00000029780.12	3364	14	62383	-309	26951	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	882	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGGCATTGGCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	119514654	119512081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_119514110_119514255_119514334_119514437
ENSMUSG00000028134.12_119512218_119517817_1	chr3	-	2262	4	ISM	ENSMUSG00000028134.12	ENSMUST00000029780.12	3364	14	59220	-173	23788	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATAGGTCTTTTGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	119517817	119512217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742
ENSMUSG00000028134.12_119512391_119519872_1	chr3	-	2299	6	ISM	ENSMUSG00000028134.12	ENSMUST00000029780.12	3364	14	57165	0	21733	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCTGTTCCTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	119519872	119512390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714
ENSMUSG00000028134.12_119512643_119514333_1	chr3	-	1542	2	ISM	ENSMUSG00000028134.12	ENST00000675401.1	2746	9	27272	231	27272	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	119514333	119512642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_119514107_119514255
ENSMUSG00000028134.12_119512643_119576883_1	chr3	-	2965	13	NNC	ENSMUSG00000028134.12	novel	3000	14	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	119576883	119512642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519870_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555451_119576850
ENSMUSG00000028134.12_119512643_119576883_2	chr3	-	2973	14	NIC	ENSMUSG00000028134.12	novel	3000	14	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	2142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	119576883	119512642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519870_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ENSMUSG00000028134.12_119512777_119514333_1	chr3	-	1408	2	ISM	ENSMUSG00000028134.12	ENST00000675401.1	2746	9	27272	365	27272	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATAGATTCTGTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	119514333	119512776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_119514107_119514255
ENSMUSG00000028134.12_119513342_119534159_1	chr3	-	1541	7	NIC	ENSMUSG00000028134.12	novel	2746	9	NA	NA	7446	-699	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGCCCTATGTGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	119534159	119513341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519870_119533963
ENSMUSG00000028136.16_94409364_94489986_1	chr3	-	1348	11	FSM	ENSMUSG00000028136.16	ENST00000642376.1	1370	11	6	16	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGACTGATTATCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	94489986	94409363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94489682
ENSMUSG00000028136.16_94409364_94489986_2	chr3	-	1342	11	NNC	ENSMUSG00000028136.16	novel	1370	11	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGACTGATTATCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	94489986	94409363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418354_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94489682
ENSMUSG00000028136.16_94409364_94489986_3	chr3	-	1342	11	NNC	ENSMUSG00000028136.16	novel	1370	11	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGACTGATTATCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	94489986	94409363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_94409373_94409476_94409537_94410162_94410286_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94489682
ENSMUSG00000028136.16_94409364_94489986_4	chr3	-	1340	11	NNC	ENSMUSG00000028136.16	novel	1370	11	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGACTGATTATCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	94489986	94409363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426511_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94489682
ENSMUSG00000028136.16_94409364_94489986_5	chr3	-	1338	11	NNC	ENSMUSG00000028136.16	novel	1370	11	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGACTGATTATCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	94489986	94409363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436228_94436284_94438503_94438697_94489682
ENSMUSG00000028136.16_94426417_94489709_1	chr3	-	934	7	ISM	ENSMUSG00000028136.16	ENSMUST00000107283.8	3531	12	147	19797	147	-17053	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAGAAGAAGAAGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	94489709	94426416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
ENSMUSG00000028138.9_138148854_138157265_1	chr3	+	914	6	ISM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	0	3995	0	-3297	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACATGTGCCCGCAT	NA	NA	NA	NA	NA	NA	NA	NA	138148853	138157265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004
ENSMUSG00000028138.9_138151079_138159581_1	chr3	+	864	6	ISM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	2225	1679	30	-981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTCGTCCATTCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	138151078	138159581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502
ENSMUSG00000028138.9_138152849_138160461_1	chr3	+	875	6	ISM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	3995	799	1800	-101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTGAATATATGTCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	138152848	138160461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428
ENSMUSG00000028138.9_138152892_138160564_1	chr3	+	935	6	ISM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	4038	696	1843	2	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGAGTTTTCAGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	138152891	138160564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428
ENSMUSG00000028138.9_138152969_138160564_1	chr3	+	858	6	ISM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	4115	696	1920	2	internal_fragment	FALSE	canonical	NA	NA	NA	NA	913	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGAGTTTTCAGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	138152968	138160564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428
ENSMUSG00000028138.9_138153659_138161004_1	chr3	+	957	6	ISM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	4805	256	2610	-256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAGGCAAATTCCACATA	NA	NA	NA	NA	NA	NA	NA	NA	138153658	138161004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ENSMUSG00000028138.9_138157134_138161260_1	chr3	+	822	4	ISM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	8280	0	6085	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGTATTCAGAAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	138157133	138161260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_138157266_138159502_138159639_138160428_138160568_138160845
ENSMUSG00000028140.14_94350644_94355144_1	chr3	+	729	7	FSM	ENSMUSG00000028140.14	ENSMUST00000029786.14	1612	7	12	871	0	-871	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCCCAAGACGAAAAGATAC	NA	NA	NA	NA	NA	NA	NA	NA	94350643	94355144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94355092
ENSMUSG00000028140.14_94350644_94355208_1	chr3	+	793	7	FSM	ENSMUSG00000028140.14	ENSMUST00000029786.14	1612	7	12	807	0	-807	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCCCCAGGCTGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	94350643	94355208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94355092
ENSMUSG00000028140.14_94350750_94355268_1	chr3	+	747	7	FSM	ENSMUSG00000028140.14	ENSMUST00000029786.14	1612	7	118	747	106	-747	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCAGCTCTGAGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	94350749	94355268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94355092
ENSMUSG00000028140.14_94351934_94355464_1	chr3	+	694	5	ISM	ENSMUSG00000028140.14	ENSMUST00000029786.14	1612	7	1302	551	1290	-551	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAGAGTTGGTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	94351933	94355464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94355092
ENSMUSG00000028140.14_94351987_94355512_1	chr3	+	689	5	ISM	ENSMUSG00000028140.14	ENSMUST00000029786.14	1612	7	1355	503	1343	-503	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGTTTTATTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	94351986	94355512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94355092
ENSMUSG00000028140.14_94354005_94355699_1	chr3	+	731	3	ISM	ENSMUSG00000028140.14	ENSMUST00000029786.14	1612	7	3373	316	3361	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTACATCTGCTCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	94354004	94355699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94354045_94354566_94354651_94355092
ENSMUSG00000028140.14_94354638_94355805_1	chr3	+	726	2	ISM	ENSMUSG00000028140.14	ENSMUST00000029786.14	1612	7	4006	210	3994	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATTAAAGATGCTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	94354637	94355805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94354651_94355092
ENSMUSG00000028141.13_94340694_94351140_1	chr3	-	881	5	NNC	ENSMUSG00000028141.13	novel	881	6	NA	NA	0	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	2989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGCTGTTTCTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	94351140	94340693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_94340948_94341770_94341857_94342277_94342454_94343262_94343433_94350945
ENSMUSG00000028141.13_94340694_94351140_2	chr3	-	882	5	FSM	ENSMUSG00000028141.13	ENST00000321531.10	880	5	0	-2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGCTGTTTCTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	94351140	94340693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_94340948_94341770_94341857_94342277_94342454_94343262_94343433_94350944
ENSMUSG00000028141.13_94340794_94350989_1	chr3	-	455	4	FSM	ENSMUSG00000028141.13	ENST00000635322.1	704	4	151	98	151	-98	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGTGAGGGGTTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	94350989	94340793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_94340948_94341770_94341857_94343262_94343433_94350944
ENSMUSG00000028141.13_94340838_94343731_1	chr3	-	579	5	FSM	ENSMUSG00000028141.13	ENST00000400999.7	911	5	190	142	143	-142	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTGGCCACCCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	94343731	94340837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_94340948_94341770_94341857_94342277_94342454_94343262_94343433_94343694
ENSMUSG00000028141.13_94340856_94351029_1	chr3	-	433	4	FSM	ENSMUSG00000028141.13	ENST00000635322.1	704	4	111	160	111	-160	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATCCCCTTGAAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	94351029	94340855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_94340948_94341770_94341857_94343262_94343433_94350944
ENSMUSG00000028141.13_94340871_94343874_1	chr3	-	689	5	FSM	ENSMUSG00000028141.13	ENST00000400999.7	911	5	47	175	0	-175	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCATCTTCATGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	94343874	94340870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_94340948_94341770_94341857_94342277_94342454_94343262_94343433_94343694
ENSMUSG00000028141.13_94340893_94351140_1	chr3	-	507	4	FSM	ENSMUSG00000028141.13	ENST00000635322.1	704	4	0	197	0	-197	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCCCTCCCTCCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	94351140	94340892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_94340948_94341770_94341857_94343262_94343433_94350944
ENSMUSG00000028141.13_94340926_94343874_1	chr3	-	634	5	FSM	ENSMUSG00000028141.13	ENST00000400999.7	911	5	47	230	0	-230	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATGGGCTTCGAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	94343874	94340925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_94340948_94341770_94341857_94342277_94342454_94343262_94343433_94343694
ENSMUSG00000028149.13_138671726_138727638_1	chr3	-	370	4	ISM	ENSMUSG00000028149.13	ENSMUST00000196280.5	3598	15	53260	40059	53193	-25199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATCCCGACCTTAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	138727638	138671725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_138671758_138689482_138689630_138721306_138721433_138727573
ENSMUSG00000028150.15_94296397_94304837_1	chr3	+	1091	7	ISM	ENSMUSG00000028150.15	ENSMUST00000197040.5	2576	10	11658	746	11574	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGAAAAGGCTTGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	94296396	94304837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94296565_94296781_94296904_94298380_94298514_94298686_94298795_94298951_94299063_94300337_94300448_94304498
ENSMUSG00000028150.15_94296514_94304955_1	chr3	+	1092	7	ISM	ENSMUSG00000028150.15	ENSMUST00000197040.5	2576	10	11775	628	11691	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGGATAAATCCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	94296513	94304955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94296565_94296781_94296904_94298380_94298514_94298686_94298795_94298951_94299063_94300337_94300448_94304498
ENSMUSG00000028156.13_138231940_138261435_1	chr3	+	969	8	FSM	ENSMUSG00000028156.13	ENSMUST00000029803.12	4991	8	0	4022	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTCCCCCACCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	138231939	138261435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_138232056_138233028_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ENSMUSG00000028156.13_138256024_138261764_1	chr3	+	932	4	ISM	ENSMUSG00000028156.13	ENSMUST00000200100.2	729	6	22967	-329	22967	-211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTATTTGCTTCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	138256023	138261764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_138256088_138256653_138256768_138259342_138259483_138261150
ENSMUSG00000028156.13_138256734_138261975_1	chr3	+	999	3	ISM	ENSMUSG00000028156.13	ENSMUST00000200100.2	729	6	23677	-540	23677	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTGATCTATGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	138256733	138261975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_138256768_138259342_138259483_138261150
ENSMUSG00000028161.18_136376531_136596234_1	chr3	+	771	7	ISM	ENSMUSG00000028161.18	ENST00000507176.5	1974	13	-21	45308	0	-45306	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTCTAATTACAATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	136376530	136596234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_136376663_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196
ENSMUSG00000028161.18_136376531_136641569_1	chr3	+	2193	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	646	1919	0	27	multi-exon	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGAAAAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	136376530	136641569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ENSMUSG00000028161.18_136503529_136641868_1	chr3	+	2318	12	ISM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	127644	1620	126977	326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAATATTTATGAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	136503528	136641868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ENSMUSG00000028161.18_136503619_136641935_1	chr3	+	2295	12	ISM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	127734	1553	127067	393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTATATTCTGTAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	136503618	136641935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ENSMUSG00000028161.18_136574399_136642051_1	chr3	+	2306	11	ISM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	198514	1437	197847	509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCCTGACATTTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	136574398	136642051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ENSMUSG00000028161.18_136583443_136642262_1	chr3	+	2264	9	ISM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	207558	1226	206891	720	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTACATGTGTAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	136583442	136642262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ENSMUSG00000028161.18_136587255_136640833_1	chr3	+	678	9	ISM	ENSMUSG00000028161.18	ENST00000507176.5	1974	13	210703	709	210703	-707	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCAAGGGCTTAGACCG	NA	NA	NA	NA	NA	NA	NA	NA	136587254	136640833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136637771_136637802_136640789
ENSMUSG00000028161.18_136608910_136642750_1	chr3	+	2299	5	ISM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	233025	738	232358	-738	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTTCTGCTGTAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	136608909	136642750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ENSMUSG00000028161.18_136611058_136641105_1	chr3	+	606	5	ISM	ENSMUSG00000028161.18	ENST00000507176.5	1974	13	234506	437	234506	-435	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGTTTACACTATCAT	NA	NA	NA	NA	NA	NA	NA	NA	136611057	136641105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_136611135_136627593_136627679_136634282_136634381_136637771_136637802_136640789
ENSMUSG00000028161.18_136611079_136641202_1	chr3	+	682	5	ISM	ENSMUSG00000028161.18	ENST00000507176.5	1974	13	234527	340	234527	-338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGTATGCCTTTAAAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	136611078	136641202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_136611135_136627593_136627679_136634282_136634381_136637771_136637802_136640789
ENSMUSG00000028161.18_136627608_136642903_1	chr3	+	2283	3	ISM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	251723	585	251056	-585	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATTGGTTGTCAGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	136627607	136642903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_136627679_136634282_136634381_136640789
ENSMUSG00000028161.18_136634361_136641438_1	chr3	+	699	3	ISM	ENSMUSG00000028161.18	ENST00000507176.5	1974	13	257809	104	257809	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAGAAAAAAAAAAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	136634360	136641438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_136634381_136637771_136637802_136640789
ENSMUSG00000028163.18_135291162_135314039_1	chr3	-	1796	13	ISM	ENSMUSG00000028163.18	ENSMUST00000164430.7	3007	23	59521	123	59521	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACGGTTATGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	135314039	135291161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969_135300140_135300625_135300828_135307186_135307302_135309470_135309613_135310817_135311007_135312332_135312423_135313912
ENSMUSG00000028165.10_135112299_135116910_1	chr3	-	2492	2	ISM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	12776	126	12258	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTTACTGGAATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	135116910	135112298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_135114652_135116771
ENSMUSG00000028165.10_135112731_135129399_1	chr3	-	2516	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	287	558	-231	-558	multi-exon	FALSE	canonical	NA	NA	NA	NA	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCCTGTCTGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	135129399	135112730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_135114652_135116771_135116987_135129019
ENSMUSG00000028165.10_135112828_135129456_1	chr3	-	2470	3	NNC	ENSMUSG00000028165.10	novel	3361	3	NA	NA	230	-655	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTTTGTAGTCTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	135129456	135112827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_135114652_135116771_135116981_135129019
ENSMUSG00000028173.11_159545547_159640539_1	chr3	+	2201	12	FSM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	238	1120	173	-172	multi-exon	FALSE	canonical	NA	NA	NA	NA	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAACTTCATGAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	159545546	159640539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ENSMUSG00000028173.11_159545547_159644303_1	chr3	+	1880	13	FSM	ENSMUSG00000028173.11	ENSMUST00000198878.2	2050	13	173	-3	173	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTATTTCCGTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	159545546	159644303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886_159640006_159644090
ENSMUSG00000028173.11_159602971_159640784_1	chr3	+	2032	10	ISM	ENSMUSG00000028173.11	ENST00000370976.7	2294	11	57618	-73	57597	73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGAATAAAATGAATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	159602970	159640784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ENSMUSG00000028173.11_159602999_159640860_1	chr3	+	2080	10	ISM	ENSMUSG00000028173.11	ENST00000370976.7	2294	11	57646	-149	57625	149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGGAGTACCCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	159602998	159640860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ENSMUSG00000028173.11_159603038_159640922_1	chr3	+	2103	10	ISM	ENSMUSG00000028173.11	ENST00000370976.7	2294	11	57685	-211	57664	211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGTATCAAGTATTAAG	NA	NA	NA	NA	NA	NA	NA	NA	159603037	159640922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ENSMUSG00000028173.11_159612788_159641148_1	chr3	+	2076	8	ISM	ENSMUSG00000028173.11	ENST00000370976.7	2294	11	67435	-437	67414	437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTATCGAAGGTCTATCA	NA	NA	NA	NA	NA	NA	NA	NA	159612787	159641148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ENSMUSG00000028173.11_159612837_159641200_1	chr3	+	2079	8	ISM	ENSMUSG00000028173.11	ENST00000370976.7	2294	11	67484	-489	67463	-459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATAACTATTCCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	159612836	159641200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ENSMUSG00000028173.11_159615317_159641314_1	chr3	+	2114	7	ISM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	70008	345	69943	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGTCTAAAAAAAAAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	159615316	159641314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ENSMUSG00000028173.11_159615379_159641354_1	chr3	+	2092	7	ISM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	70070	305	70005	-305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAGCAATGATTGAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	159615378	159641354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ENSMUSG00000028173.11_159616969_159641456_1	chr3	+	2080	6	ISM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	71660	203	71595	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAGTGACAGAGAAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	159616968	159641456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ENSMUSG00000028173.11_159617000_159641526_1	chr3	+	2119	6	ISM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	71691	133	71626	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTATGTGATCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	159616999	159641526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ENSMUSG00000028173.11_159617441_159641659_1	chr3	+	2175	5	ISM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	72132	0	72067	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATGGAGTGAGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	159617440	159641659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ENSMUSG00000028175.16_159201095_159234791_1	chr3	+	1666	11	FSM	ENSMUSG00000028175.16	ENSMUST00000106041.3	1971	11	0	305	0	-305	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGCCGTACATGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	159201094	159234791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ENSMUSG00000028175.16_159201095_159234878_1	chr3	+	1753	11	FSM	ENSMUSG00000028175.16	ENSMUST00000106041.3	1971	11	0	218	0	-218	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACAGTCTTTATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	159201094	159234878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ENSMUSG00000028175.16_159204208_159235098_1	chr3	+	1657	10	ISM	ENSMUSG00000028175.16	ENSMUST00000106041.3	1971	11	3113	-2	3113	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCTTCTTTATTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	159204207	159235098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ENSMUSG00000028176.14_157789303_157866133_1	chr3	-	1796	7	ISM	ENSMUSG00000028176.14	ENST00000651989.2	7175	27	401261	1024	292293	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCACGTGCAGTGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	157866133	157789302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_157790184_157810064_157810140_157832851_157832945_157840824_157841047_157854216_157854337_157862424_157862566_157865869
ENSMUSG00000028176.14_157789432_157866219_1	chr3	-	1753	7	ISM	ENSMUSG00000028176.14	ENSMUST00000106044.6	5918	28	401639	-644	292207	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAATCTCTGGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	157866219	157789431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_157790184_157810064_157810140_157832851_157832945_157840824_157841047_157854216_157854337_157862424_157862566_157865869
ENSMUSG00000028176.14_157832895_157867072_1	chr3	-	1736	5	ISM	ENSMUSG00000028176.14	ENSMUST00000106044.6	5918	28	400786	42819	291354	-42819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATTAGTGGGCAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	157867072	157832894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_157832945_157840824_157841047_157854216_157854337_157862424_157862566_157865869
ENSMUSG00000028176.14_157968718_158009053_1	chr3	-	539	4	ISM	ENSMUSG00000028176.14	ENST00000370958.5	957	7	149373	0	149373	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGGAACCCAAAAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	158009053	157968717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_157969030_157994616_157994674_157997569_157997660_158008973
ENSMUSG00000028176.14_157968908_158058929_1	chr3	-	494	6	ISM	ENSMUSG00000028176.14	ENST00000370958.5	957	7	99497	190	99497	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCAAACCCTGTTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	158058929	157968907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_157969030_157994616_157994674_157997569_157997660_158008973_158009053_158024071_158024190_158058901
ENSMUSG00000028176.14_157968970_158059070_1	chr3	-	573	6	ISM	ENSMUSG00000028176.14	ENST00000370958.5	957	7	99356	252	99356	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGAGGAGGAGGCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	158059070	157968969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_157969030_157994616_157994674_157997569_157997660_158008973_158009053_158024071_158024190_158058901
ENSMUSG00000028176.14_157997611_158158383_1	chr3	-	504	5	ISM	ENSMUSG00000028176.14	ENST00000370958.5	957	7	43	28893	43	-28893	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACGCATTCCTCGAATT	NA	NA	NA	NA	NA	NA	NA	NA	158158383	157997610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_157997660_158008973_158009053_158024071_158024190_158058901_158059105_158158328
ENSMUSG00000028180.19_157239797_157246346_1	chr3	+	637	5	ISM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	0	7701	0	-7627	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCTCTCAGATATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	157239796	157246346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269
ENSMUSG00000028180.19_157239996_157247402_1	chr3	+	639	7	ISM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	-29	6611	0	-6571	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAGAAAAGCAATAG	NA	NA	NA	NA	NA	NA	NA	NA	157239995	157247402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336
ENSMUSG00000028180.19_157241971_157247506_1	chr3	+	627	6	ISM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	1946	6507	1946	-6467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACGGGTGCAGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	157241970	157247506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336
ENSMUSG00000028180.19_157242113_157248838_1	chr3	+	620	6	ISM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	2088	5175	2088	-5135	internal_fragment	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGTTCCAGAGAACATTCC	NA	NA	NA	NA	NA	NA	NA	NA	157242112	157248838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794
ENSMUSG00000028180.19_157243224_157250698_1	chr3	+	650	6	ISM	ENSMUSG00000028180.19	ENSMUST00000029831.16	2540	10	3228	3275	3199	-3275	internal_fragment	TRUE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGACCTTCTTCACCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	157243223	157250698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600
ENSMUSG00000028180.19_157246732_157252440_1	chr3	+	640	5	ISM	ENSMUSG00000028180.19	ENSMUST00000029831.16	2540	10	6736	1533	6707	-1533	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCTCATTTGGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	157246731	157252440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ENSMUSG00000028180.19_157246789_157252454_1	chr3	+	597	5	ISM	ENSMUSG00000028180.19	ENSMUST00000029831.16	2540	10	6793	1519	6764	-1519	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGAAGTACTACATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	157246788	157252454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ENSMUSG00000028180.19_157248803_157252717_1	chr3	+	644	3	ISM	ENSMUSG00000028180.19	ENSMUST00000029831.16	2540	10	8807	1256	8778	-1256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTGGACTTCAGACACA	NA	NA	NA	NA	NA	NA	NA	NA	157248802	157252717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157248882_157250600_157250760_157252311
ENSMUSG00000028184.13_148521491_148542197_1	chr3	-	3104	9	ISM	ENSMUSG00000028184.13	ENSMUST00000195988.5	4541	22	118226	-1238	-13582	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACGTGCACTTTTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	148542197	148521490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987
ENSMUSG00000028184.13_148521712_148543373_1	chr3	-	3057	10	ISM	ENSMUSG00000028184.13	ENSMUST00000195988.5	4541	22	117050	-1017	-14758	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATAAAACAGAAATATT	NA	NA	NA	NA	NA	NA	NA	NA	148543373	148521711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199
ENSMUSG00000028184.13_148521858_148544917_1	chr3	-	3084	11	ISM	ENSMUSG00000028184.13	ENSMUST00000195988.5	4541	22	115506	-871	-16302	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGCACAAATGTGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	148544917	148521857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744
ENSMUSG00000028184.13_148522072_148552543_1	chr3	-	3088	13	ISM	ENSMUSG00000028184.13	ENSMUST00000195988.5	4541	22	107880	-657	-23928	27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTTTGGAGAAAATATTG	NA	NA	NA	NA	NA	NA	NA	NA	148552543	148522071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484
ENSMUSG00000028184.13_148522130_148552586_1	chr3	-	3073	13	ISM	ENSMUSG00000028184.13	ENSMUST00000195988.5	4541	22	107837	-599	-23971	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAGGGTAAAATAAATACAT	NA	NA	NA	NA	NA	NA	NA	NA	148552586	148522129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484
ENSMUSG00000028184.13_148522177_148552641_1	chr3	-	3081	13	ISM	ENSMUSG00000028184.13	ENSMUST00000195988.5	4541	22	107782	-552	-24026	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTCATGAAAAAAAAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	148552641	148522176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484
ENSMUSG00000028184.13_148522354_148556659_1	chr3	-	3119	14	ISM	ENSMUSG00000028184.13	ENST00000674168.1	5782	21	139550	835	-28044	222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGACTGTATCTTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	148556659	148522353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471
ENSMUSG00000028184.13_148522729_148558498_1	chr3	-	3142	16	ISM	ENSMUSG00000028184.13	ENST00000674168.1	5782	21	137711	1210	-29883	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCGGCCAGAAGACTCG	NA	NA	NA	NA	NA	NA	NA	NA	148558498	148522728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202
ENSMUSG00000028184.13_148522729_148564686_1	chr3	-	3497	18	ISM	ENSMUSG00000028184.13	ENSMUST00000195988.5	4541	22	95737	0	-36071	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCGGCCAGAAGACTCG	NA	NA	NA	NA	NA	NA	NA	NA	148564686	148522728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148555401_148555441_148556471_148556658_148557530_148557635_148558202_148558497_148564368
ENSMUSG00000028184.13_148523358_148564914_1	chr3	-	3057	17	ISM	ENSMUSG00000028184.13	ENST00000674168.1	5782	21	131295	1839	-36299	-629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAACTTGGAGCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	148564914	148523357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368
ENSMUSG00000028184.13_148526626_148556567_1	chr3	-	2301	16	ISM	ENSMUSG00000028184.13	ENSMUST00000197567.5	5585	24	103727	4914	-27952	-29	internal_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATATCATTTAGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	148556567	148526625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148527045_148528590_148528688_148529331_148529461_148532000_148532170_148532847_148532875_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148555401_148555441_148556471
ENSMUSG00000028184.13_148526980_148558361_1	chr3	-	2300	18	ISM	ENSMUSG00000028184.13	ENSMUST00000197567.5	5585	24	101933	5268	-29746	-383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCCTGCTCGCTGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	148558361	148526979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148527045_148528590_148528688_148529331_148529461_148532000_148532170_148532847_148532875_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148555401_148555441_148556471_148556658_148557530_148557635_148558202
ENSMUSG00000028184.13_148528590_148565169_1	chr3	-	3106	16	ISM	ENSMUSG00000028184.13	ENST00000674168.1	5782	21	131040	7071	-36554	-1993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTAACGGGGGAACCGA	NA	NA	NA	NA	NA	NA	NA	NA	148565169	148528589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148528688_148529331_148529461_148532000_148532170_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368
ENSMUSG00000028184.13_148529383_148564450_1	chr3	-	2304	17	ISM	ENSMUSG00000028184.13	ENSMUST00000197567.5	5585	24	95844	7671	-35835	-2786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGGCATCCACCACCCG	NA	NA	NA	NA	NA	NA	NA	NA	148564450	148529382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148529461_148532000_148532170_148532847_148532875_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148555401_148555441_148556471_148556658_148557530_148557635_148558202_148558497_148564368
ENSMUSG00000028184.13_148529424_148596109_1	chr3	-	3088	17	ISM	ENSMUSG00000028184.13	ENST00000674168.1	5782	21	100100	7905	64162	-2827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTGGCGGCCTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	148596109	148529423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148529461_148532000_148532170_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047
ENSMUSG00000028184.13_148532026_148564568_1	chr3	-	2319	16	ISM	ENSMUSG00000028184.13	ENSMUST00000197567.5	5585	24	95726	10314	-35953	-5429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCACTGTGCTCTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	148564568	148532025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148532170_148532847_148532875_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148555401_148555441_148556471_148556658_148557530_148557635_148558202_148558497_148564368
ENSMUSG00000028184.13_148532101_148564618_1	chr3	-	2294	16	ISM	ENSMUSG00000028184.13	ENSMUST00000197567.5	5585	24	95676	10389	-36003	-5504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAACGAGGAGACTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	148564618	148532100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148532170_148532847_148532875_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148555401_148555441_148556471_148556658_148557530_148557635_148558202_148558497_148564368
ENSMUSG00000028184.13_148534113_148660410_1	chr3	-	3201	15	ISM	ENSMUSG00000028184.13	ENST00000674407.1	5325	22	35799	12014	0	-7516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACTTTGTATTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	148660410	148534112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198
ENSMUSG00000028184.13_148540940_148565014_1	chr3	-	2390	11	ISM	ENSMUSG00000028184.13	ENSMUST00000199059.5	4637	23	95409	18211	-36399	-14343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAATTGCAAGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	148565014	148540939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148555401_148555441_148556471_148556658_148557530_148557635_148558202_148558497_148564368
ENSMUSG00000028184.13_148540940_148696191_1	chr3	-	3119	14	ISM	ENSMUSG00000028184.13	ENST00000674407.1	5325	22	18	18841	0	-14343	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAATTGCAAGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	148696191	148540939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148696075
ENSMUSG00000028184.13_148543245_148596178_1	chr3	-	2310	11	ISM	ENSMUSG00000028184.13	ENST00000674208.1	5097	21	64193	21128	64093	-16648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTAACCAATTTTGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	148596178	148543244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148555401_148555441_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047
ENSMUSG00000028184.13_148543288_148596236_1	chr3	-	2325	11	ISM	ENSMUSG00000028184.13	ENST00000674208.1	5097	21	64135	21171	64035	-16691	internal_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGGTTGACACTAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	148596236	148543287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148555401_148555441_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047
ENSMUSG00000028184.13_148564763_148596180_1	chr3	-	650	3	ISM	ENSMUSG00000028184.13	ENST00000674208.1	5097	21	64191	42646	64091	-38166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGAACGGCTTATGGGT	NA	NA	NA	NA	NA	NA	NA	NA	148596180	148564762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148565170_148571235_148571346_148596047
ENSMUSG00000028187.11_146211711_146226986_1	chr3	-	1463	9	FSM	ENSMUSG00000028187.11	ENSMUST00000029838.11	1661	9	198	0	180	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCTGTGTGAGCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	146226986	146211710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ENSMUSG00000028189.13_146156248_146170365_1	chr3	+	1630	7	FSM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	23	1239	0	-1161	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGACACAGTCTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	146156247	146170365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
ENSMUSG00000028189.13_146160798_146170699_1	chr3	+	1592	5	ISM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	4573	905	4550	-827	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCCTACTTTTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	146160797	146170699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
ENSMUSG00000028189.13_146160859_146170748_1	chr3	+	1580	5	ISM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	4634	856	4611	-778	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTATCTAAGAACATTATT	NA	NA	NA	NA	NA	NA	NA	NA	146160858	146170748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
ENSMUSG00000028191.12_145630112_145639407_1	chr3	+	1150	3	FSM	ENSMUSG00000028191.12	ENSMUST00000029842.9	1949	3	95	704	-74	346	multi-exon	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCTGATTGTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	145630111	145639407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_145630271_145636160_145636450_145638705
ENSMUSG00000028191.12_145630222_145638870_1	chr3	+	470	3	FSM	ENSMUSG00000028191.12	ENST00000620248.2	697	3	36	191	36	-191	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGAACTTGCCAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	145630221	145638870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_145630271_145636160_145636450_145638738
ENSMUSG00000028191.12_145636161_145639526_1	chr3	+	1110	2	ISM	ENSMUSG00000028191.12	ENSMUST00000029842.9	1949	3	6144	585	5975	465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGAAGCCGTCGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	145636160	145639526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_145636450_145638705
ENSMUSG00000028191.12_145636356_145639061_1	chr3	+	417	2	ISM	ENSMUSG00000028191.12	ENST00000620248.2	697	3	6170	0	6170	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCACCGCCTAGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	145636355	145639061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_145636450_145638738
ENSMUSG00000028194.16_145464580_145597685_1	chr3	+	1267	6	FSM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	150	2347	150	-1336	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTTTCTCTGTATCATG	NA	NA	NA	NA	NA	NA	NA	NA	145464579	145597685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_145464920_145551459_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
ENSMUSG00000028194.16_145464659_145597767_1	chr3	+	1270	6	FSM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	229	2265	229	-1254	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGCCCCTAAAAACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	145464658	145597767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_145464920_145551459_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
ENSMUSG00000028194.16_145464717_145597844_1	chr3	+	1289	6	FSM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	287	2188	287	-1177	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAAGCTCTTGCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	145464716	145597844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_145464920_145551459_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
ENSMUSG00000028194.16_145551459_145597984_1	chr3	+	1227	5	ISM	ENSMUSG00000028194.16	ENSMUST00000120310.2	2291	6	84956	1037	84956	-1037	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTGACAGGCTTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	145551458	145597984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
ENSMUSG00000028194.16_145551536_145598117_1	chr3	+	1283	5	ISM	ENSMUSG00000028194.16	ENSMUST00000120310.2	2291	6	85033	904	85033	-904	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGCCTCATGACTAGT	NA	NA	NA	NA	NA	NA	NA	NA	145551535	145598117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
ENSMUSG00000028194.16_145559009_145598306_1	chr3	+	1277	3	ISM	ENSMUSG00000028194.16	ENSMUST00000120310.2	2291	6	92506	715	92506	-715	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGGGCTGCCTCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	145559008	145598306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_145559032_145594838_145594983_145597196
ENSMUSG00000028194.16_145594915_145598421_1	chr3	+	1293	2	ISM	ENSMUSG00000028194.16	ENSMUST00000120310.2	2291	6	128412	600	128412	-600	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGTGAAACTTCAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	145594914	145598421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_145594983_145597196
ENSMUSG00000028195.5_145352969_145353359_1	chr3	-	341	2	ISM	ENSMUSG00000028195.5	ENST00000451137.7	2001	6	2377	270	2377	-238	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCGAGCGGAGGGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	145353359	145352968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_145353208_145353257
ENSMUSG00000028195.5_145353041_145353419_1	chr3	-	329	2	ISM	ENSMUSG00000028195.5	ENST00000451137.7	2001	6	2317	342	2317	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGATTAGTTGGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	145353419	145353040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_145353208_145353257
ENSMUSG00000028195.5_145353098_145353501_1	chr3	-	354	2	ISM	ENSMUSG00000028195.5	ENST00000451137.7	2001	6	2235	399	2235	-367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGCTCCAGACCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	145353501	145353097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_145353208_145353257
ENSMUSG00000028195.5_145353524_145354002_1	chr3	-	251	2	ISM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	1734	793	1734	-793	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATCCAGTCCTGCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	145354002	145353523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_145353724_145353951
ENSMUSG00000028195.5_145353593_145354069_1	chr3	-	249	2	ISM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	1667	862	1667	-862	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGACCAGAACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	145354069	145353592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_145353724_145353951
ENSMUSG00000028195.5_145353653_145354355_1	chr3	-	354	3	ISM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	1381	922	1381	-922	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAAGAAATACCGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	145354355	145353652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_145353724_145353951_145354167_145354287
ENSMUSG00000028195.5_145354057_145354353_1	chr3	-	176	2	ISM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	1383	1326	1383	-1326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCCACACGAGTTACCAA	NA	NA	NA	NA	NA	NA	NA	NA	145354353	145354056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_145354167_145354287
ENSMUSG00000028195.5_145354484_145355010_1	chr3	-	183	2	ISM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	726	1753	726	-1753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCTGTCCCAACCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	145355010	145354483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_145354633_145354976
ENSMUSG00000028195.5_145354538_145355075_1	chr3	-	189	2	NNC	ENSMUSG00000028195.5	novel	2019	5	NA	NA	661	-1807	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCGCCGTGGGCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	145355075	145354537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_145354628_145354976
ENSMUSG00000028195.5_145354577_145355570_1	chr3	-	356	3	ISM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	166	1846	166	-1846	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCCAGCCCAACTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	145355570	145354576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_145354633_145354976_145355191_145355484
ENSMUSG00000028195.5_145355099_145355736_1	chr3	-	344	2	ISM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	0	2368	0	-2368	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAAGGTCTGCGCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	145355736	145355098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_145355191_145355484
ENSMUSG00000028199.19_154302348_154327335_1	chr3	+	1345	8	ISM	ENSMUSG00000028199.19	ENSMUST00000192462.6	2505	9	0	1482	0	-1482	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGAGATAAACCCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	154302347	154327335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315
ENSMUSG00000028199.19_154302348_154327369_1	chr3	+	1379	8	ISM	ENSMUSG00000028199.19	ENSMUST00000192462.6	2505	9	0	1448	0	-1448	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACAAGCATCATTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	154302347	154327369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315
ENSMUSG00000028199.19_154302467_154328617_1	chr3	+	2186	9	FSM	ENSMUSG00000028199.19	ENSMUST00000192462.6	2505	9	119	200	119	-200	multi-exon	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCAGCCTTATCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	154302466	154328617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ENSMUSG00000028199.19_154302553_154328819_1	chr3	+	2302	9	FSM	ENSMUSG00000028199.19	ENSMUST00000029850.15	2507	9	205	0	205	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTCTGTCTCGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	154302552	154328819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ENSMUSG00000028199.19_154302667_154328819_1	chr3	+	2188	9	FSM	ENSMUSG00000028199.19	ENSMUST00000029850.15	2507	9	319	0	319	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTCTGTCTCGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	154302666	154328819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ENSMUSG00000028207.19_9575267_9669162_2	chr4	-	2879	14	NNC	ENSMUSG00000028207.19	novel	2884	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGATTGTCATTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	9669162	9575266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610930_9635896_9635970_9639197_9639348_9668780
ENSMUSG00000028207.19_9635901_9639290_1	chr4	-	207	3	ISM	ENSMUSG00000028207.19	ENST00000389204.8	300	4	4280	0	4280	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTACTCTTCTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	9639290	9635900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_9635970_9637658_9637704_9639197
ENSMUSG00000028207.19_9635901_9639290_2	chr4	-	201	3	NNC	ENSMUSG00000028207.19	novel	300	4	NA	NA	4280	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTACTCTTCTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	9639290	9635900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_9635970_9637658_9637698_9639197
ENSMUSG00000028207.19_9637661_9643549_1	chr4	-	208	3	ISM	ENSMUSG00000028207.19	ENST00000389204.8	300	4	21	1760	21	-1760	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGGCACTGGAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	9643549	9637660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_9637704_9639197_9639348_9643534
ENSMUSG00000028212.17_11191736_11203755_1	chr4	+	1975	12	FSM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	6	927	6	-920	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATCAGTAAGGCACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	11191735	11203755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ENSMUSG00000028212.17_11194025_11204114_1	chr4	+	1967	8	ISM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	2295	568	2295	-561	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTAGAAATTTATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	11194024	11204114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ENSMUSG00000028212.17_11195084_11204228_1	chr4	+	1964	7	ISM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	3354	454	3354	-447	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAAAATGGTACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	11195083	11204228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ENSMUSG00000028212.17_11195141_11204288_1	chr4	+	1967	7	ISM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	3411	394	3411	-387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGATATGAAGTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	11195140	11204288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ENSMUSG00000028212.17_11199310_11204675_1	chr4	+	2083	4	ISM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	7580	7	7580	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACTACAGAAAAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	11199309	11204675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_11199432_11201304_11201417_11202189_11202348_11202984
ENSMUSG00000028212.17_11199378_11204675_1	chr4	+	2015	4	ISM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	7648	7	7648	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACTACAGAAAAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	11199377	11204675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_11199432_11201304_11201417_11202189_11202348_11202984
ENSMUSG00000028218.20_12153724_12155730_1	chr4	-	337	2	ISM	ENSMUSG00000028218.20	ENST00000620645.1	821	7	15484	-175	15484	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTACATAGTCTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	12155730	12153723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_12153979_12155648
ENSMUSG00000028218.20_12153857_12171214_1	chr4	-	863	7	FSM	ENSMUSG00000028218.20	ENST00000620645.1	821	7	0	-42	0	42	multi-exon	FALSE	canonical	NA	NA	NA	NA	2756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTTGCAAATGTAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	12171214	12153856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983
ENSMUSG00000028218.20_12153857_12171214_2	chr4	-	861	7	NNC	ENSMUSG00000028218.20	novel	821	7	NA	NA	0	42	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTTGCAAATGTAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	12171214	12153856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170985
ENSMUSG00000028218.20_12171046_12171871_1	chr4	-	347	2	ISM	ENSMUSG00000028218.20	ENSMUST00000087052.11	1292	8	124	17322	124	-17147	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGGTCTGAAAGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	12171871	12171045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_12171219_12171697
ENSMUSG00000028221.4_14864222_14912448_1	chr4	+	666	6	ISM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	146	2728	146	-2728	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCCCCGGAGACGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	14864221	14912448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431
ENSMUSG00000028221.4_14864371_14913773_1	chr4	+	641	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	295	1403	295	-1403	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAATTGCTTATCTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	14864370	14913773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
ENSMUSG00000028221.4_14864417_14913857_1	chr4	+	679	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	341	1319	341	-1319	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTAAGTCTCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	14864416	14913857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
ENSMUSG00000028221.4_14886572_14913884_1	chr4	+	647	6	ISM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	22496	1292	22496	-1292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCAGGCGAGAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	14886571	14913884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
ENSMUSG00000028221.4_14886624_14913935_1	chr4	+	646	6	ISM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	22548	1241	22548	-1241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATCATTTATCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	14886623	14913935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
ENSMUSG00000028221.4_14892468_14914098_1	chr4	+	675	5	ISM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	28392	1078	28392	-1078	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATAAAGGTATTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	14892467	14914098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
ENSMUSG00000028223.9_15917425_15919859_1	chr4	-	1761	3	ISM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	25648	185	25648	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTTTGGGTTTGGAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	15919859	15917424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_15919095_15919193_15919257_15919831
ENSMUSG00000028223.9_15917772_15929775_1	chr4	-	1755	6	ISM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	15732	532	15732	-532	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTATCTTACTAATATAT	NA	NA	NA	NA	NA	NA	NA	NA	15929775	15917771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726
ENSMUSG00000028223.9_15918047_15932926_1	chr4	-	1758	9	ISM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	12581	807	12581	-807	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATTCAGCCTTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	15932926	15918046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892
ENSMUSG00000028223.9_15918096_15932981_1	chr4	-	1764	9	ISM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	12526	856	12526	-856	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCTGTTTTCATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	15932981	15918095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892
ENSMUSG00000028223.9_15918184_15933058_1	chr4	-	1753	9	ISM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	12449	944	12449	-944	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAGTGGAGGTAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	15933058	15918183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892
ENSMUSG00000028223.9_15918362_15945507_1	chr4	-	1837	10	FSM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	0	1122	0	-1122	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTCCTTCAGGACGGG	NA	NA	NA	NA	NA	NA	NA	NA	15945507	15918361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892_15933096_15945282
ENSMUSG00000028223.9_15918423_15945507_1	chr4	-	1776	10	FSM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	0	1183	0	-1183	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTCCCTATCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	15945507	15918422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892_15933096_15945282
ENSMUSG00000028224.15_15957967_15976130_1	chr4	+	1197	9	ISM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	42	16459	42	-16459	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCTGACACAGAATCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	15957966	15976130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_15958111_15962310_15962445_15963771_15963921_15964246_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034
ENSMUSG00000028224.15_15958078_15979174_1	chr4	+	1154	10	ISM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	153	13415	153	-13415	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCTGGACTGGAACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	15958077	15979174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_15958111_15962310_15962445_15963771_15963921_15964246_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140
ENSMUSG00000028224.15_15962420_15979314_1	chr4	+	1152	9	ISM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	4495	13275	4495	-13275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATGAAATTTCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	15962419	15979314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_15962445_15963771_15963921_15964246_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140
ENSMUSG00000028224.15_15964282_15981554_1	chr4	+	1290	8	ISM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	6357	11035	6357	-11035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGATGTTGATTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	15964281	15981554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306
ENSMUSG00000028224.15_15969339_15981748_1	chr4	+	1257	6	ISM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	11414	10841	11414	-10841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAACTGTTTACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	15969338	15981748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306
ENSMUSG00000028224.15_15970756_15986525_1	chr4	+	1188	7	ISM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	12831	6064	12831	-6064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGCAGTGAGGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	15970755	15986525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508
ENSMUSG00000028224.15_15970824_15986581_1	chr4	+	1176	7	ISM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	12899	6008	12899	-6008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCAGTAACCACAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	15970823	15986581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508
ENSMUSG00000028224.15_15971819_15989032_1	chr4	+	1146	7	ISM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	13894	3557	13894	-3557	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATCGGAGGATCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	15971818	15989032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001
ENSMUSG00000028224.15_15976113_15991217_1	chr4	+	1142	7	ISM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	18188	1372	18188	-1372	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATCTGTTTAGGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	15976112	15991217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181
ENSMUSG00000028224.15_15979242_15992589_1	chr4	+	1159	7	ISM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	21317	0	21317	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGTGTGGTAACGT	NA	NA	NA	NA	NA	NA	NA	NA	15979241	15992589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
ENSMUSG00000028228.6_19522534_19525092_1	chr4	-	851	2	ISM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	45016	3280	45016	-3280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGACACTCAAACTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	19525092	19522533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_19523295_19525002
ENSMUSG00000028228.6_19523000_19532499_1	chr4	-	874	6	ISM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	37609	3746	37609	-3746	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTGCTCAGTGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	19532499	19522999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398
ENSMUSG00000028228.6_19523174_19535264_1	chr4	-	846	8	ISM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	34844	3920	34844	-3920	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCTGCAGGATTTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	19535264	19523173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211
ENSMUSG00000028228.6_19525065_19540788_1	chr4	-	844	9	ISM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	29320	5811	29320	-5811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGAGAGGTGGCCATA	NA	NA	NA	NA	NA	NA	NA	NA	19540788	19525064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740
ENSMUSG00000028229.12_19575207_19606739_1	chr4	+	1541	10	FSM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	0	193	0	-193	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATATGCCACCACTATAA	NA	NA	NA	NA	NA	NA	NA	NA	19575206	19606739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_19575328_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
ENSMUSG00000028229.12_19575311_19606820_1	chr4	+	1518	10	FSM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	104	112	104	-112	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAAGTCATGAGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	19575310	19606820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_19575328_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
ENSMUSG00000028229.12_19580388_19606149_10	chr4	+	697	8	NNC	ENSMUSG00000028229.12	novel	703	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACAACATACCTAATACT	NA	NA	NA	NA	NA	NA	NA	NA	19580387	19606149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_19580508_19586781_19586864_19588525_19588686_19599613_19599670_19601355_19601444_19602642_19602674_19605441_19605537_19606084
ENSMUSG00000028229.12_19580388_19606149_11	chr4	+	699	8	NNC	ENSMUSG00000028229.12	novel	703	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACAACATACCTAATACT	NA	NA	NA	NA	NA	NA	NA	NA	19580387	19606149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_19580508_19586775_19586864_19588525_19588686_19599617_19599670_19601355_19601444_19602642_19602674_19605441_19605537_19606084
ENSMUSG00000028229.12_19580388_19606149_2	chr4	+	741	8	NNC	ENSMUSG00000028229.12	novel	742	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	899	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACAACATACCTAATACT	NA	NA	NA	NA	NA	NA	NA	NA	19580387	19606149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_19580508_19586775_19586864_19588525_19588686_19599614_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
ENSMUSG00000028229.12_19580388_19606149_3	chr4	+	703	8	FSM	ENSMUSG00000028229.12	ENST00000519966.5	703	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACAACATACCTAATACT	NA	NA	NA	NA	NA	NA	NA	NA	19580387	19606149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_19580508_19586775_19586864_19588525_19588686_19599613_19599670_19601355_19601444_19602642_19602674_19605441_19605537_19606084
ENSMUSG00000028229.12_19580388_19606149_4	chr4	+	697	8	NNC	ENSMUSG00000028229.12	novel	703	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACAACATACCTAATACT	NA	NA	NA	NA	NA	NA	NA	NA	19580387	19606149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_19580508_19586775_19586864_19588525_19588686_19599613_19599670_19601355_19601444_19602642_19602674_19605441_19605537_19606090
ENSMUSG00000028229.12_19580388_19606149_5	chr4	+	736	8	NNC	ENSMUSG00000028229.12	novel	742	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACAACATACCTAATACT	NA	NA	NA	NA	NA	NA	NA	NA	19580387	19606149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_19580508_19586775_19586864_19588525_19588686_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606090
ENSMUSG00000028229.12_19580388_19606149_7	chr4	+	742	8	FSM	ENSMUSG00000028229.12	ENST00000430676.6	742	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACAACATACCTAATACT	NA	NA	NA	NA	NA	NA	NA	NA	19580387	19606149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_19580508_19586775_19586864_19588525_19588686_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
ENSMUSG00000028229.12_19580388_19606149_8	chr4	+	736	8	NNC	ENSMUSG00000028229.12	novel	742	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	899	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACAACATACCTAATACT	NA	NA	NA	NA	NA	NA	NA	NA	19580387	19606149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_19580508_19586781_19586864_19588525_19588686_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
ENSMUSG00000028229.12_19580388_19606149_9	chr4	+	698	8	NNC	ENSMUSG00000028229.12	novel	742	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACAACATACCTAATACT	NA	NA	NA	NA	NA	NA	NA	NA	19580387	19606149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_19580508_19586775_19586864_19588525_19588686_19599613_19599670_19601355_19601444_19602642_19602674_19605446_19605537_19606084
ENSMUSG00000028229.12_19580435_19606932_1	chr4	+	1568	9	ISM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	5228	0	47	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTGGATTTAAGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	19580434	19606932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
ENSMUSG00000028229.12_19580478_19606932_1	chr4	+	1525	9	ISM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	5271	0	90	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTGGATTTAAGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	19580477	19606932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
ENSMUSG00000028232.14_3550533_3564258_1	chr4	-	462	4	NNC	ENSMUSG00000028232.14	novel	468	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAACATTAGGAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	3564258	3550532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_3550574_3554353_3554415_3560498_3560693_3564092
ENSMUSG00000028232.14_3550533_3564258_2	chr4	-	468	4	FSM	ENSMUSG00000028232.14	ENST00000523073.5	468	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAACATTAGGAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	3564258	3550532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_3550580_3554353_3554415_3560498_3560693_3564092
ENSMUSG00000028233.7_3574950_3585745_1	chr4	+	697	4	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	75	30874	75	-30874	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGCAAAGCTGGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	3574949	3585745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451
ENSMUSG00000028233.7_3585675_3589201_1	chr4	+	646	2	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	10800	27418	10800	-27418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGATGGACATGAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	3585674	3589201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_3586266_3589146
ENSMUSG00000028233.7_3585783_3591288_1	chr4	+	662	3	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	10908	25331	10908	-25331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTCAAGCATGGCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	3585782	3591288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_3586266_3589146_3589265_3591227
ENSMUSG00000028233.7_3591258_3598621_1	chr4	+	644	4	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	16383	17998	16383	-17998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTTCTCTCGCTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	3591257	3598621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_3591315_3593459_3593638_3595356_3595658_3598513
ENSMUSG00000028233.7_3595494_3604876_1	chr4	+	636	4	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	20619	11743	20619	-11743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACCTTCGACATTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	3595493	3604876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_3595658_3598513_3598664_3602146_3602291_3604698
ENSMUSG00000028233.7_3598554_3614967_1	chr4	+	659	5	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	23679	1652	23679	-1652	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTCTGAAGACCAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	3598553	3614967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ENSMUSG00000028234.7_3832104_3835291_1	chr4	-	2754	3	ISM	ENSMUSG00000028234.7	ENSMUST00000138502.2	3706	4	374	770	1	-770	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAATTTCTGTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	3835291	3832103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_3834684_3834935_3835010_3835191
ENSMUSG00000028234.7_3832254_3835574_1	chr4	-	2695	4	FSM	ENSMUSG00000028234.7	ENSMUST00000138502.2	3706	4	91	920	-25	-920	multi-exon	FALSE	canonical	NA	NA	NA	NA	4549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCTTAGTCCCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	3835574	3832253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483
ENSMUSG00000028234.7_3832309_3835665_1	chr4	-	2731	4	FSM	ENSMUSG00000028234.7	ENSMUST00000138502.2	3706	4	0	975	0	-975	multi-exon	FALSE	canonical	NA	NA	NA	NA	4241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATTTCCTGAGGACATG	NA	NA	NA	NA	NA	NA	NA	NA	3835665	3832308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483
ENSMUSG00000028234.7_3834473_3835558_1	chr4	-	576	4	FSM	ENSMUSG00000028234.7	ENST00000521262.5	546	4	-9	-21	-9	21	multi-exon	FALSE	canonical	NA	NA	NA	NA	2253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGCTGGCTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	3835558	3834472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_3834684_3834935_3835010_3835191_3835292_3835367
ENSMUSG00000028245.16_6396207_6408639_1	chr4	-	1141	6	ISM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	45632	0	45632	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTCTTATCTTATTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	6408639	6396206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557
ENSMUSG00000028245.16_6396653_6416559_1	chr4	-	1101	11	ISM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	37712	446	37712	-446	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAATGATAGTACTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	6416559	6396652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499
ENSMUSG00000028245.16_6396769_6416651_1	chr4	-	1077	11	ISM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	37620	562	37620	-562	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGAGGGGAAGACAGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	6416651	6396768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499
ENSMUSG00000028245.16_6398379_6417822_1	chr4	-	1100	12	ISM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	36449	2172	36449	-2172	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTTGTTTGGGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	6417822	6398378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745
ENSMUSG00000028245.16_6408607_6421136_1	chr4	-	1126	13	ISM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	33135	12400	33135	-12400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCATAACGACAGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	6421136	6408606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056
ENSMUSG00000028245.16_6409019_6423413_1	chr4	-	1214	13	ISM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	30858	12812	30858	-12812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAAAAGGCCTTTCACGA	NA	NA	NA	NA	NA	NA	NA	NA	6423413	6409018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321
ENSMUSG00000028245.16_6416562_6428448_1	chr4	-	1100	12	ISM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	25823	20355	25823	-20355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAGTTTAAAAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	6428448	6416561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391
ENSMUSG00000028245.16_6416615_6428521_1	chr4	-	1120	12	ISM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	25750	20408	25750	-20408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGGGCAGACACCAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	6428521	6416614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391
ENSMUSG00000028245.16_6421094_6454096_1	chr4	-	1141	14	ISM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	175	24887	175	-24887	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCCCTAAATGCGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	6454096	6421093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ENSMUSG00000028245.16_6423431_6454255_1	chr4	-	1148	13	ISM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	16	27224	16	-27224	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTACCTGCTCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	6454255	6423430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ENSMUSG00000028247.3_21879673_21911079_1	chr4	+	1568	7	FSM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	0	1083	0	483	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAACCTAGGGTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	21879672	21911079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_21879797_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
ENSMUSG00000028247.3_21879780_21911139_1	chr4	+	1521	7	FSM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	107	1023	107	543	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCTCCCTTAATTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	21879779	21911139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_21879797_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
ENSMUSG00000028247.3_21899056_21911402_1	chr4	+	1489	4	ISM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	19383	760	-36	-760	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCACAGCATTAAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	21899055	21911402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21899158_21900263_21900507_21908482_21908643_21910418
ENSMUSG00000028247.3_21899090_21911486_1	chr4	+	1539	4	ISM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	19417	676	-2	-676	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCTATATAAATAAAATACAC	NA	NA	NA	NA	NA	NA	NA	NA	21899089	21911486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21899158_21900263_21900507_21908482_21908643_21910418
ENSMUSG00000028247.3_21899142_21911547_1	chr4	+	1548	4	ISM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	19469	615	50	-615	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATACATGGTAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	21899141	21911547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21899158_21900263_21900507_21908482_21908643_21910418
ENSMUSG00000028247.3_21900388_21911649_1	chr4	+	1510	3	ISM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	20715	513	1296	-513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGAACAGGAGAGATAGT	NA	NA	NA	NA	NA	NA	NA	NA	21900387	21911649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21900507_21908482_21908643_21910418
ENSMUSG00000028247.3_21900425_21911713_1	chr4	+	1537	3	ISM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	20752	449	1333	-449	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCCCCAGCACCCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	21900424	21911713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21900507_21908482_21908643_21910418
ENSMUSG00000028248.16_21848073_21874177_1	chr4	+	2081	11	FSM	ENSMUSG00000028248.16	ENST00000369239.10	4734	11	25	2628	9	-2290	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTGAGGATCCACGTG	NA	NA	NA	NA	NA	NA	NA	NA	21848072	21874177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_21848140_21854262_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ENSMUSG00000028248.16_21848081_21874143_1	chr4	+	2034	11	FSM	ENSMUSG00000028248.16	ENST00000481229.2	4713	11	17	2662	17	-2324	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGTTCCAGTCGCAGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	21848080	21874143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_21848140_21854262_21854446_21857184_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ENSMUSG00000028248.16_21854262_21874351_1	chr4	+	2189	10	ISM	ENSMUSG00000028248.16	ENSMUST00000098238.9	4407	11	6207	2116	6198	-2116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAGATTTTAAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	21854261	21874351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ENSMUSG00000028248.16_21854371_21874274_1	chr4	+	1998	10	ISM	ENSMUSG00000028248.16	ENST00000481229.2	4713	11	6307	2531	6307	-2193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGATAAAGACAGGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	21854370	21874274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21854446_21857184_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ENSMUSG00000028248.16_21858999_21874551_1	chr4	+	2101	8	ISM	ENSMUSG00000028248.16	ENSMUST00000098238.9	4407	11	10944	1916	10935	-1916	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCGGAAGTAGCAAAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	21858998	21874551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ENSMUSG00000028248.16_21859142_21874610_1	chr4	+	2017	8	ISM	ENSMUSG00000028248.16	ENSMUST00000098238.9	4407	11	11087	1857	11078	-1857	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATCTCAAAGGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	21859141	21874610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ENSMUSG00000028248.16_21859196_21874672_1	chr4	+	2025	8	ISM	ENSMUSG00000028248.16	ENSMUST00000098238.9	4407	11	11141	1795	11132	-1795	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTATACTTTTTAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	21859195	21874672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ENSMUSG00000028248.16_21860837_21874809_1	chr4	+	2033	7	ISM	ENSMUSG00000028248.16	ENSMUST00000098238.9	4407	11	12782	1658	12773	-1658	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTAGAAATCCTGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	21860836	21874809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ENSMUSG00000028248.16_21861986_21875032_1	chr4	+	2102	6	ISM	ENSMUSG00000028248.16	ENSMUST00000098238.9	4407	11	13931	1435	13922	-1435	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGGTGAAACCAGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	21861985	21875032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ENSMUSG00000028248.16_21865877_21875256_1	chr4	+	2134	5	ISM	ENSMUSG00000028248.16	ENSMUST00000098238.9	4407	11	17822	1211	17813	-1211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	21865876	21875256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ENSMUSG00000028248.16_21871496_21875502_1	chr4	+	2030	2	ISM	ENSMUSG00000028248.16	ENSMUST00000098238.9	4407	11	23441	965	23432	-965	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAGGCATTCAAGTAATA	NA	NA	NA	NA	NA	NA	NA	NA	21871495	21875502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21871609_21873585
ENSMUSG00000028249.16_6365650_6385187_1	chr4	+	530	5	ISM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	0	11097	0	-9378	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATATTTTTGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	6365649	6385187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025
ENSMUSG00000028249.16_6365708_6395306_1	chr4	+	1709	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	58	978	-5	-349	multi-exon	FALSE	canonical	NA	NA	NA	NA	3577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTAGTCACTGCATAAA	NA	NA	NA	NA	NA	NA	NA	NA	6365707	6395306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ENSMUSG00000028249.16_6377118_6386604_1	chr4	+	451	5	ISM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	11468	9680	34	-7961	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCCAGATCAACGGTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	6377117	6386604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532
ENSMUSG00000028249.16_6378963_6386708_1	chr4	+	533	4	ISM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	13313	9576	1879	-7857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTGCTACCACCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	6378962	6386708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_6379048_6380989_6381100_6385025_6385188_6386532
ENSMUSG00000028249.16_6378963_6393729_1	chr4	+	636	5	ISM	ENSMUSG00000028249.16	ENST00000447267.4	747	7	1879	836	1879	-836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAATAGCTCTTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	6378962	6393729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_6379048_6380989_6381100_6386532_6386709_6392945_6393118_6393636
ENSMUSG00000028249.16_6380990_6392995_1	chr4	+	498	4	ISM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	15340	3289	3906	-1570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTATCTTTAAAAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	6380989	6392995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_6381100_6385025_6385188_6386532_6386709_6392945
ENSMUSG00000028249.16_6380990_6394565_1	chr4	+	606	5	ISM	ENSMUSG00000028249.16	ENST00000447267.4	747	7	3906	0	3906	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGTACAATGCATCACG	NA	NA	NA	NA	NA	NA	NA	NA	6380989	6394565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_6381100_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ENSMUSG00000028249.16_6385028_6393117_1	chr4	+	508	3	ISM	ENSMUSG00000028249.16	ENSMUST00000103008.12	2086	9	19351	2538	7944	-1448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGACTCACATGACCC	NA	NA	NA	NA	NA	NA	NA	NA	6385027	6393117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_6385188_6386532_6386709_6392945
ENSMUSG00000028249.16_6385028_6395655_1	chr4	+	1746	5	ISM	ENSMUSG00000028249.16	ENSMUST00000103008.12	2086	9	19351	0	7944	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGTCTGTCTGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6385027	6395655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ENSMUSG00000028249.16_6392985_6394755_1	chr4	+	471	3	ISM	ENSMUSG00000028249.16	ENST00000447267.4	747	7	15901	-190	15901	190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTACAGATGTGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	6392984	6394755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_6393118_6393636_6393729_6394509
ENSMUSG00000028249.16_6393662_6394908_1	chr4	+	466	2	ISM	ENSMUSG00000028249.16	ENST00000447267.4	747	7	16578	-343	16578	343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCACAGTGCTAGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	6393661	6394908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_6393729_6394509
ENSMUSG00000028252.21_21727767_21746679_1	chr4	+	819	11	ISM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	12	1283	12	-1283	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAACTGTATGAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	21727766	21746679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655
ENSMUSG00000028252.21_21727767_21746741_1	chr4	+	881	11	ISM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	12	1221	12	-1221	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGATGCCGAAACCAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	21727766	21746741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655
ENSMUSG00000028252.21_21727870_21747563_1	chr4	+	892	12	FSM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	115	399	62	-399	multi-exon	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACAGTTACTGGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	21727869	21747563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482
ENSMUSG00000028252.21_21730397_21748218_1	chr4	+	847	11	ISM	ENSMUSG00000028252.21	ENST00000523799.5	987	12	2753	78	2589	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGGAAGTAAAGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	21730396	21748218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
ENSMUSG00000028252.21_21732514_21748360_1	chr4	+	772	9	ISM	ENSMUSG00000028252.21	ENST00000523799.5	987	12	4870	-64	4706	64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTATTAATGCTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	21732513	21748360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
ENSMUSG00000028252.21_21740592_21748554_1	chr4	+	869	7	ISM	ENSMUSG00000028252.21	ENST00000523799.5	987	12	12948	-258	12784	258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCATTTGTTGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	21740591	21748554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
ENSMUSG00000028252.21_21746368_21748730_1	chr4	+	775	3	ISM	ENSMUSG00000028252.21	ENST00000369220.8	1957	12	18560	493	18560	434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTTACTTATTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21746367	21748730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21746430_21746655_21746775_21748136
ENSMUSG00000028252.21_21746412_21748792_1	chr4	+	793	3	ISM	ENSMUSG00000028252.21	ENST00000369220.8	1957	12	18604	431	18604	-431	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCCAGCCTATCAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	21746411	21748792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21746430_21746655_21746775_21748136
ENSMUSG00000028252.21_21746654_21748783_1	chr4	+	763	2	NNC	ENSMUSG00000028252.21	novel	3365	12	NA	NA	18846	-440	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATACTGGCCCAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	21746653	21748783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_21746775_21748141
ENSMUSG00000028252.21_21746683_21748843_1	chr4	+	799	2	ISM	ENSMUSG00000028252.21	ENST00000369220.8	1957	12	18875	380	18875	-380	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTTGGATTGACTTACT	NA	NA	NA	NA	NA	NA	NA	NA	21746682	21748843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_21746775_21748136
ENSMUSG00000028252.21_21746709_21748845_1	chr4	+	770	2	NNC	ENSMUSG00000028252.21	novel	3365	12	NA	NA	18901	-378	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGGATTGACTTACTAG	NA	NA	NA	NA	NA	NA	NA	NA	21746708	21748845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_21746775_21748141
ENSMUSG00000028256.17_144842349_144845531_1	chr3	+	191	2	ISM	ENSMUSG00000028256.17	ENST00000317336.11	1064	8	965	11313	965	-11313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTTCTAGGGTACAC	NA	NA	NA	NA	NA	NA	NA	NA	144842348	144845531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_144842500_144845491
ENSMUSG00000028256.17_144842464_144845620_1	chr3	+	165	2	ISM	ENSMUSG00000028256.17	ENST00000317336.11	1064	8	1080	11224	1080	-11224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAAAAACCCTCGTCGAA	NA	NA	NA	NA	NA	NA	NA	NA	144842463	144845620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_144842500_144845491
ENSMUSG00000028256.17_144850109_144852617_1	chr3	+	163	2	ISM	ENSMUSG00000028256.17	ENST00000317336.11	1064	8	8725	4227	8725	-4227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCAGCGCTGCAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	144850108	144852617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_144850178_144852523
ENSMUSG00000028256.17_144850159_144852676_1	chr3	+	172	2	ISM	ENSMUSG00000028256.17	ENST00000317336.11	1064	8	8775	4168	8775	-4168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGTGTCCATCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	144850158	144852676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_144850178_144852523
ENSMUSG00000028256.17_144852634_144854388_1	chr3	+	146	2	ISM	ENSMUSG00000028256.17	ENST00000317336.11	1064	8	11250	2456	11250	-2456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGACTTCAAACTCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	144852633	144854388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_144852683_144854291
ENSMUSG00000028261.14_24898573_24902287_1	chr4	+	698	2	ISM	ENSMUSG00000028261.14	ENSMUST00000029925.10	3632	3	490	2714	490	-2714	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGACAGATAATCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	24898572	24902287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_24898677_24901693
ENSMUSG00000028266.18_143894444_143910717_1	chr3	-	1252	5	FSM	ENSMUSG00000028266.18	ENSMUST00000120539.8	1669	5	264	153	264	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCTCATAGCCGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	143910717	143894443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_143895067_143899656_143899813_143900167_143900265_143907573_143907813_143910580
ENSMUSG00000028266.18_143894823_143910941_1	chr3	-	1097	5	FSM	ENSMUSG00000028266.18	ENSMUST00000120539.8	1669	5	40	532	40	-379	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAAGGACATCTAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	143910941	143894822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_143895067_143899656_143899813_143900167_143900265_143907573_143907813_143910580
ENSMUSG00000028271.10_142470806_142487315_1	chr3	+	977	6	ISM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	0	2052	0	-2052	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTGGCGGCAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	142470805	142487315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_142471050_142477146_142477254_142483951_142484086_142485452_142485600_142485730_142485861_142487100
ENSMUSG00000028271.10_142470984_142488972_1	chr3	+	882	7	FSM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	178	395	178	-395	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTGCTGATGTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	142470983	142488972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_142471050_142477146_142477254_142483951_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
ENSMUSG00000028271.10_142470984_142489029_1	chr3	+	939	7	FSM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	178	338	178	-338	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCTCTTCCCTTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	142470983	142489029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_142471050_142477146_142477254_142483951_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
ENSMUSG00000028271.10_142477240_142489173_1	chr3	+	924	6	ISM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	6434	194	6434	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAGGAAAAAGGAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	142477239	142489173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_142477254_142483951_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
ENSMUSG00000028271.10_142485451_142489367_1	chr3	+	972	4	ISM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	14645	0	14645	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTTATAGTATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	142485450	142489367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_142485600_142485730_142485861_142487100_142487383_142488956
ENSMUSG00000028273.16_142008076_142009740_1	chr3	-	1144	2	ISM	ENSMUSG00000028273.16	ENSMUST00000168967.9	1755	8	87871	-5	87829	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTATACTTGTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	142009740	142008075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_142009183_142009703
ENSMUSG00000028273.16_142008241_142010203_1	chr3	-	1125	3	ISM	ENSMUSG00000028273.16	ENSMUST00000168967.9	1755	8	87408	160	87366	-160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTTACAAAGATATATTT	NA	NA	NA	NA	NA	NA	NA	NA	142010203	142008240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_142009183_142009703_142009741_142010057
ENSMUSG00000028273.16_142008281_142010222_1	chr3	-	1104	3	ISM	ENSMUSG00000028273.16	ENSMUST00000168967.9	1755	8	87389	200	87347	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACTTGGAGTTATAAAC	NA	NA	NA	NA	NA	NA	NA	NA	142010222	142008280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_142009183_142009703_142009741_142010057
ENSMUSG00000028273.16_142008379_142010230_1	chr3	-	1014	3	ISM	ENSMUSG00000028273.16	ENSMUST00000168967.9	1755	8	87381	298	87339	-298	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTGTCAATACTAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	142010230	142008378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_142009183_142009703_142009741_142010057
ENSMUSG00000028273.16_142008513_142058646_1	chr3	-	1124	4	ISM	ENSMUSG00000028273.16	ENST00000318007.9	1751	5	38961	493	38923	-432	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAGATATTTTACCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	142058646	142008512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_142009183_142009703_142009741_142010057_142010231_142058402
ENSMUSG00000028273.16_142008635_142097569_1	chr3	-	1098	5	FSM	ENSMUSG00000028273.16	ENST00000318007.9	1751	5	38	615	0	347	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGCAGATTCAGCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	142097569	142008634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_142009183_142009703_142009741_142010057_142010231_142058402_142058647_142097473
ENSMUSG00000028273.16_142008982_142097569_1	chr3	-	1121	7	ISM	ENSMUSG00000028273.16	ENSMUST00000196908.5	1196	8	3810	0	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAATTGGTGTGCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	142097569	142008981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_142009183_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473
ENSMUSG00000028273.16_142009089_142101457_1	chr3	-	854	8	NNC	ENSMUSG00000028273.16	novel	873	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGCCCTGCTCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	142101457	142009088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_142009183_142009703_142009741_142010057_142010231_142017869_142017976_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ENSMUSG00000028274.18_33325109_33443667_1	chr4	+	1178	11	ISM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	14798	58947	14798	-58947	internal_fragment	TRUE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGATTGTTCATTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	33325108	33443667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600
ENSMUSG00000028274.18_33331014_33500379_1	chr4	+	1157	11	ISM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	20703	2235	20703	-2235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGCATCGGCCAACCT	NA	NA	NA	NA	NA	NA	NA	NA	33331013	33500379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ENSMUSG00000028274.18_33337901_33500511_1	chr4	+	1182	10	ISM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	27590	2103	27590	-2103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGTATATATTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	33337900	33500511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ENSMUSG00000028274.18_33356096_33500732_1	chr4	+	1194	8	ISM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	45785	1882	45785	-1882	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATTGAGTTTTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	33356095	33500732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ENSMUSG00000028274.18_33368577_33500932_1	chr4	+	1217	6	ISM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	58266	1682	58266	-1682	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGTGAGAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	33368576	33500932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ENSMUSG00000028274.18_33368671_33500996_1	chr4	+	1187	6	ISM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	58360	1618	58360	-1618	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTAGAAACTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	33368670	33500996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ENSMUSG00000028274.18_33498978_33501329_1	chr4	+	1189	2	ISM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	188667	1285	188667	-1285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTTGCTGAGACTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	33498977	33501329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33499075_33500237
ENSMUSG00000028277.14_33031416_33051261_1	chr4	+	2428	8	FSM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	0	1102	0	-1102	multi-exon	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAACAGCTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	33031415	33051261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33045079_33045200_33049681
ENSMUSG00000028277.14_33038234_33051478_1	chr4	+	2335	6	ISM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	6818	885	6818	-885	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATTGTTTATTGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	33038233	33051478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33045079_33045200_33049681
ENSMUSG00000028277.14_33041380_33051701_1	chr4	+	2352	4	ISM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	9964	662	9964	-662	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCCTGATGGTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	33041379	33051701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33041462_33043856_33043987_33045079_33045200_33049681
ENSMUSG00000028277.14_33043917_33051828_1	chr4	+	2337	3	ISM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	12501	535	12501	-535	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGTTGTTCCAAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	33043916	33051828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33043987_33045079_33045200_33049681
ENSMUSG00000028277.14_33043966_33051885_1	chr4	+	2345	3	ISM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	12550	478	12550	-478	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGTGTTGGTATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	33043965	33051885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33043987_33045079_33045200_33049681
ENSMUSG00000028280.10_33132521_33161651_1	chr4	+	1053	8	ISM	ENSMUSG00000028280.10	ENST00000435811.5	1919	9	153	1471	0	-1471	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCACCATCATCACGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	33132520	33161651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33132776_33148920_33149028_33151368_33151437_33152412_33152637_33157059_33157143_33158036_33158178_33160116_33160270_33161629
ENSMUSG00000028280.10_33132637_33152486_1	chr4	+	442	5	ISM	ENSMUSG00000028280.10	ENSMUST00000029947.6	2286	10	116	11102	14	-10636	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATGACCTTTGATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	33132636	33152486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33132776_33146936_33146991_33148920_33149028_33151368_33151437_33152412
ENSMUSG00000028280.10_33132677_33161689_1	chr4	+	935	8	ISM	ENSMUSG00000028280.10	ENST00000435811.5	1919	9	309	1433	54	-1433	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTCCTACATCAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	33132676	33161689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33132776_33148920_33149028_33151368_33151437_33152412_33152637_33157059_33157143_33158036_33158178_33160116_33160270_33161629
ENSMUSG00000028280.10_33132693_33152534_1	chr4	+	434	5	ISM	ENSMUSG00000028280.10	ENSMUST00000029947.6	2286	10	172	11054	70	-10588	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTCTTTGTGCACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	33132692	33152534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33132776_33146936_33146991_33148920_33149028_33151368_33151437_33152412
ENSMUSG00000028280.10_33132736_33161736_1	chr4	+	923	8	ISM	ENSMUSG00000028280.10	ENST00000435811.5	1919	9	368	1386	113	-1386	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTCGTCTTCCTCTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	33132735	33161736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33132776_33148920_33149028_33151368_33151437_33152412_33152637_33157059_33157143_33158036_33158178_33160116_33160270_33161629
ENSMUSG00000028280.10_33132747_33152590_1	chr4	+	436	5	ISM	ENSMUSG00000028280.10	ENSMUST00000029947.6	2286	10	226	10998	124	-10532	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTGCGCGTCCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	33132746	33152590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33132776_33146936_33146991_33148920_33149028_33151368_33151437_33152412
ENSMUSG00000028280.10_33148973_33162606_1	chr4	+	943	8	ISM	ENSMUSG00000028280.10	ENST00000454853.7	1715	10	16350	516	16350	-516	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTCGAGGGGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	33148972	33162606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33149028_33151368_33151437_33152412_33152637_33157059_33157143_33158036_33158178_33160116_33160270_33161629_33161827_33162584
ENSMUSG00000028280.10_33152477_33162777_1	chr4	+	927	6	ISM	ENSMUSG00000028280.10	ENST00000454853.7	1715	10	19854	345	19854	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGAGGATCAACACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	33152476	33162777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33152637_33157059_33157143_33158036_33158178_33160116_33160270_33161629_33161827_33162584
ENSMUSG00000028280.10_33152532_33162829_1	chr4	+	924	6	ISM	ENSMUSG00000028280.10	ENST00000454853.7	1715	10	19909	293	19909	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCTTACATTTTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	33152531	33162829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33152637_33157059_33157143_33158036_33158178_33160116_33160270_33161629_33161827_33162584
ENSMUSG00000028280.10_33152578_33162884_1	chr4	+	933	6	ISM	ENSMUSG00000028280.10	ENST00000454853.7	1715	10	19955	238	19955	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGTGTATGTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	33152577	33162884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33152637_33157059_33157143_33158036_33158178_33160116_33160270_33161629_33161827_33162584
ENSMUSG00000028280.10_33158037_33163122_1	chr4	+	1029	4	ISM	ENSMUSG00000028280.10	ENST00000454853.7	1715	10	25414	0	25414	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACATATGGACATGTCG	NA	NA	NA	NA	NA	NA	NA	NA	33158036	33163122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_33158178_33160116_33160270_33161629_33161827_33162584
ENSMUSG00000028291.8_34551172_34566565_1	chr4	+	819	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	235	343	235	-343	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTCAGATGAAGTTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	34551171	34566565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ENSMUSG00000028291.8_34565126_34566908_1	chr4	+	918	3	ISM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	14189	0	14189	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGTTTCCGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	34565125	34566908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_34565278_34565933_34566006_34566214
ENSMUSG00000028292.15_34614957_34656869_1	chr4	+	1551	17	ISM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	0	3298	0	-3298	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCTATTATTAACAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	34614956	34656869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767
ENSMUSG00000028292.15_34618552_34657241_1	chr4	+	1552	17	ISM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	3595	2926	3595	-2926	internal_fragment	TRUE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCTTCTAATCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	34618551	34657241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166
ENSMUSG00000028292.15_34623411_34660033_1	chr4	+	1590	18	ISM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	8454	134	8454	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTTCTTGGAATTACAC	NA	NA	NA	NA	NA	NA	NA	NA	34623410	34660033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ENSMUSG00000028292.15_34625399_34660167_1	chr4	+	1623	17	ISM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	10442	0	10442	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTAGTAGTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34625398	34660167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ENSMUSG00000028292.15_34630471_34660167_1	chr4	+	1539	16	ISM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	15514	0	15514	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTAGTAGTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34630470	34660167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ENSMUSG00000028292.15_34630471_34660167_2	chr4	+	1534	16	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	15514	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTAGTAGTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34630470	34660167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659988
ENSMUSG00000028293.15_34663257_34687417_1	chr4	-	2011	8	NNC	ENSMUSG00000028293.15	novel	2039	8	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGCAGTTACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	34687417	34663256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_34664231_34668925_34669061_34669493_34669664_34671779_34671847_34675029_34675183_34675471_34675632_34683284_34683463_34687243
ENSMUSG00000028293.15_34663257_34687417_2	chr4	-	2008	8	NNC	ENSMUSG00000028293.15	novel	2039	8	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGCAGTTACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	34687417	34663256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_34664231_34668925_34669051_34669486_34669664_34671779_34671847_34675029_34675183_34675471_34675632_34683284_34683463_34687243
ENSMUSG00000028293.15_34663257_34687417_3	chr4	-	2011	8	NNC	ENSMUSG00000028293.15	novel	2039	8	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGCAGTTACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	34687417	34663256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34675029_34675183_34675478_34675632_34683284_34683463_34687243
ENSMUSG00000028309.15_49645928_49650251_1	chr4	+	805	5	ISM	ENSMUSG00000028309.15	ENSMUST00000029989.11	4154	21	13862	6636	13862	-6635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAGAGAAAGGGAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	49645927	49650251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962
ENSMUSG00000028312.20_52440296_52467895_1	chr4	+	2198	16	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	1053	20365	1053	-20365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCTTAAAAAAACCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	52440295	52467895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789
ENSMUSG00000028312.20_52442300_52469927_1	chr4	+	2198	16	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	3057	18333	3057	-18333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATGCATCTAGCAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	52442299	52469927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771
ENSMUSG00000028312.20_52449365_52475045_1	chr4	+	2196	15	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	10122	13215	10122	-13215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAAAATTAAGGAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	52449364	52475045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920
ENSMUSG00000028312.20_52450869_52476736_1	chr4	+	2198	14	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	11626	11524	11626	-11524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAGAAGCTGGCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	52450868	52476736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643
ENSMUSG00000028312.20_52451319_52481727_1	chr4	+	2205	15	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	12076	6533	12076	-6533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCACCACCAGAAGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	52451318	52481727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669
ENSMUSG00000028312.20_52458461_52486587_1	chr4	+	2208	15	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	19218	1673	19218	-1673	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTACGCAGAGTCAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	52458460	52486587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ENSMUSG00000028312.20_52460168_52486860_1	chr4	+	2239	13	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	20925	1400	20925	-1400	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAATTTTTTTCTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	52460167	52486860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ENSMUSG00000028312.20_52460237_52486909_1	chr4	+	2219	13	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	20994	1351	20994	-1351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACATATAGTTGGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	52460236	52486909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ENSMUSG00000028312.20_52462891_52487182_1	chr4	+	2224	11	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	23648	1078	23648	-1078	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATCTGGAGAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	52462890	52487182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ENSMUSG00000028312.20_52462957_52487222_1	chr4	+	2198	11	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	23714	1038	23714	-1038	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGTTTATGTATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	52462956	52487222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ENSMUSG00000028312.20_52466005_52487345_1	chr4	+	2198	10	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	26762	915	26762	-915	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTATCTACAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	52466004	52487345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ENSMUSG00000028312.20_52467835_52487454_1	chr4	+	2198	9	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	28592	806	28592	-806	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTATAAGAGTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	52467834	52487454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ENSMUSG00000028312.20_52470844_52487819_1	chr4	+	2211	7	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	31601	441	31601	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTATATAGACCTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	52470843	52487819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ENSMUSG00000028312.20_52475024_52487995_1	chr4	+	2218	6	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	35781	265	35781	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTTACCCTGTCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	52475023	52487995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ENSMUSG00000028318.15_45023203_45032550_1	chr4	+	1443	9	ISM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	4620	1142	4540	185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAGGAGGCAGAAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	45023202	45032550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ENSMUSG00000028318.15_45026815_45032785_1	chr4	+	1492	7	ISM	ENSMUSG00000028318.15	ENSMUST00000029999.15	1724	14	8153	-420	8152	420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCCTTGTTTAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	45026814	45032785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ENSMUSG00000028318.15_45028028_45032965_1	chr4	+	1445	5	ISM	ENSMUSG00000028318.15	ENSMUST00000029999.15	1724	14	9366	-600	9365	600	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGGAGGTTTTAACAG	NA	NA	NA	NA	NA	NA	NA	NA	45028027	45032965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ENSMUSG00000028318.15_45028082_45033032_1	chr4	+	1458	5	ISM	ENSMUSG00000028318.15	ENSMUST00000029999.15	1724	14	9420	-667	9419	-660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGACAAGAAGCCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	45028081	45033032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ENSMUSG00000028318.15_45030778_45033220_1	chr4	+	1469	3	ISM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	12195	472	12115	-472	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCAACACTGGGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	45030777	45033220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_45030835_45031366_45031499_45031940
ENSMUSG00000028318.15_45031483_45033368_1	chr4	+	1444	2	ISM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	12900	324	12820	-324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCTACCGAGGAAATAGCG	NA	NA	NA	NA	NA	NA	NA	NA	45031482	45033368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_45031499_45031940
ENSMUSG00000028322.12_45316794_45317748_1	chr4	-	306	2	ISM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	2881	181	2769	29	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGTTTCCTGGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	45317748	45316793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_45317029_45317677
ENSMUSG00000028322.12_45316794_45317806_1	chr4	-	364	2	ISM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	2823	181	2711	29	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGTTTCCTGGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	45317806	45316793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_45317029_45317677
ENSMUSG00000028322.12_45316794_45317832_1	chr4	-	390	2	ISM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	2797	181	2685	29	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGTTTCCTGGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	45317832	45316793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_45317029_45317677
ENSMUSG00000028322.12_45316954_45319699_1	chr4	-	377	3	ISM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	930	341	818	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGAATATGGGTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	45319699	45316953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_45317029_45317677_45317830_45319549
ENSMUSG00000028322.12_45316954_45320440_1	chr4	-	395	3	FSM	ENSMUSG00000028322.12	ENST00000396521.3	603	3	77	131	77	-131	multi-exon	FALSE	canonical	NA	NA	NA	NA	1577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGAATATGGGTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	45320440	45316953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_45317029_45319549_45319700_45320270
ENSMUSG00000028322.12_45317763_45320416_1	chr4	-	363	3	ISM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	213	1150	101	-940	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACAGCTGTGGCCGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	45320416	45317762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_45317830_45319549_45319700_45320270
ENSMUSG00000028329.14_46155347_46196102_1	chr4	-	1032	6	FSM	ENSMUSG00000028329.14	ENSMUST00000058232.11	1241	6	209	0	209	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAGTAACAAGAGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	46196102	46155346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_46155827_46183117_46183236_46184287_46184454_46185590_46185697_46193049_46193158_46196048
ENSMUSG00000028329.14_46175336_46185661_1	chr4	-	435	4	ISM	ENSMUSG00000028329.14	ENSMUST00000030013.12	955	6	10650	114	10650	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAAGATGACATGTACCG	NA	NA	NA	NA	NA	NA	NA	NA	46185661	46175335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_46175416_46183117_46183236_46184287_46184454_46185590
ENSMUSG00000028329.14_46183208_46196067_1	chr4	-	427	5	ISM	ENSMUSG00000028329.14	ENSMUST00000030013.12	955	6	244	7986	244	-7986	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCCAGGAAGCTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	46196067	46183207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_46183236_46184287_46184454_46185590_46185697_46193049_46193158_46196048
ENSMUSG00000028329.14_46185591_46196304_1	chr4	-	470	3	ISM	ENSMUSG00000028329.14	ENSMUST00000030013.12	955	6	7	10369	7	-10369	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTGCCTTAAACTACTG	NA	NA	NA	NA	NA	NA	NA	NA	46196304	46185590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_46185697_46193049_46193158_46196048
ENSMUSG00000028330.9_46138613_46162986_1	chr4	+	1639	15	ISM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	0	9417	0	-9417	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTCCTCCCACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	46138612	46162986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960
ENSMUSG00000028330.9_46138815_46165240_1	chr4	+	1590	16	ISM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	202	7163	202	-7163	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCATTCTGAAGGACGTA	NA	NA	NA	NA	NA	NA	NA	NA	46138814	46165240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165
ENSMUSG00000028330.9_46145441_46167323_1	chr4	+	1535	16	ISM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	6828	5080	6828	-5080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCGGAGAGTGATAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	46145440	46167323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301
ENSMUSG00000028330.9_46149861_46169243_1	chr4	+	1636	16	ISM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	11248	3160	11248	-3160	internal_fragment	TRUE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCACCTGCCGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	46149860	46169243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128
ENSMUSG00000028330.9_46150702_46169989_1	chr4	+	1509	16	ISM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	12089	2414	12089	-2414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGAGGAGCAAATAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	46150701	46169989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944
ENSMUSG00000028330.9_46152016_46170585_1	chr4	+	1648	16	ISM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	13403	1818	13403	-1818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGAGGGGCCTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	46152015	46170585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471
ENSMUSG00000028330.9_46152981_46171979_1	chr4	+	1594	16	ISM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	14368	424	14368	-424	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAATTCTGTGCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	46152980	46171979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ENSMUSG00000028330.9_46153035_46171979_1	chr4	+	1540	16	ISM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	14422	424	14422	-424	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAATTCTGTGCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	46153034	46171979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ENSMUSG00000028330.9_46153081_46172033_1	chr4	+	1548	16	ISM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	14468	370	14468	-370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATAACTTGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	46153080	46172033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ENSMUSG00000028330.9_46156762_46172166_1	chr4	+	1536	14	ISM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	18149	237	18149	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCTAACAGCGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	46156761	46172166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ENSMUSG00000028330.9_46157901_46172271_1	chr4	+	1501	13	ISM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	19288	132	19288	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGAGGTGTGTGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	46157900	46172271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ENSMUSG00000028330.9_46159658_46172403_1	chr4	+	1601	12	ISM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	21045	0	21045	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGAGTCATGGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	46159657	46172403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ENSMUSG00000028331.13_46386094_46389423_1	chr4	-	484	3	FSM	ENSMUSG00000028331.13	ENST00000611338.4	471	3	-13	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACTCTCTCTCTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	46389423	46386093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_46386252_46387522_46387743_46389317
ENSMUSG00000028333.11_46451117_46472657_1	chr4	+	1495	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	215	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTACTCTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	46451116	46472657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_46451350_46460089_46460240_46463812_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ENSMUSG00000028333.11_46451117_46472657_2	chr4	+	1494	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	215	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTACTCTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	46451116	46472657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_46451350_46460096_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ENSMUSG00000028333.11_46451117_46472657_3	chr4	+	1501	7	FSM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	215	0	215	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTACTCTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	46451116	46472657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ENSMUSG00000028333.11_46451117_46472657_4	chr4	+	1496	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	215	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTACTCTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	46451116	46472657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472091
ENSMUSG00000028333.11_46451117_46472657_5	chr4	+	1495	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	215	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTACTCTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	46451116	46472657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469888_46470008_46471397_46471468_46472086
ENSMUSG00000028333.11_46451117_46472657_6	chr4	+	1496	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	215	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTACTCTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	46451116	46472657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468563_46468788_46469882_46470008_46471397_46471468_46472086
ENSMUSG00000028334.11_46489248_46503103_1	chr4	+	1650	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	0	529	0	-529	multi-exon	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTCAGACATCAGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	46489247	46503103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
ENSMUSG00000028334.11_46492823_46503336_1	chr4	+	1523	5	ISM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	3575	296	3575	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTGTTTAAGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	46492822	46503336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
ENSMUSG00000028334.11_46499062_46503476_1	chr4	+	1545	4	ISM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	9814	156	9814	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCACTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	46499061	46503476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_46499143_46500065_46500221_46500712_46500980_46502434
ENSMUSG00000028334.11_46499121_46503524_1	chr4	+	1534	4	ISM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	9873	108	9873	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGGAACTCACCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	46499120	46503524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_46499143_46500065_46500221_46500712_46500980_46502434
ENSMUSG00000028334.11_46500064_46503633_1	chr4	+	1623	3	ISM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	10816	-1	10816	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTTTGATGTGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	46500063	46503633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_46500221_46500712_46500980_46502434
ENSMUSG00000028337.15_46538967_46542295_1	chr4	-	673	5	ISM	ENSMUSG00000028337.15	ENST00000343933.9	1889	13	32285	63	24145	-63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTCTCAGTTGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	46542295	46538966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_46539038_46539089_46539268_46540417_46540690_46541892_46541984_46542234
ENSMUSG00000028337.15_46540541_46545728_1	chr4	-	672	6	ISM	ENSMUSG00000028337.15	ENSMUST00000030021.14	4112	13	20712	3604	20712	-1637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCTCTCTACTGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	46545728	46540540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_46540690_46541892_46541984_46542234_46542348_46543347_46543445_46544062_46544168_46545611
ENSMUSG00000028337.15_46542262_46548877_1	chr4	-	695	6	ISM	ENSMUSG00000028337.15	ENSMUST00000030021.14	4112	13	17563	5325	17563	-3358	internal_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCCATGATTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	46548877	46542261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_46542348_46543347_46543445_46544062_46544168_46545611_46545729_46546648_46546829_46548767
ENSMUSG00000028337.15_46543370_46551419_1	chr4	-	718	6	ISM	ENSMUSG00000028337.15	ENSMUST00000030021.14	4112	13	15021	6433	15021	-4466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAACCCACAGAAGGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	46551419	46543369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_46543445_46544062_46544168_46545611_46545729_46546648_46546829_46548767_46548918_46551328
ENSMUSG00000028343.11_48193323_48219425_1	chr4	-	2118	8	ISM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	60133	0	60133	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCAGCTTCCAGTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	48219425	48193322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342
ENSMUSG00000028343.11_48193559_48236988_1	chr4	-	2100	9	ISM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	42570	236	42570	-236	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGGAATCCCAGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	48236988	48193558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872
ENSMUSG00000028343.11_48193737_48243543_1	chr4	-	2014	10	NNC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	36015	-414	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAGATGTTGAGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	48243543	48193736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48243451
ENSMUSG00000028343.11_48193801_48279452_1	chr4	-	2040	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	106	478	106	-478	multi-exon	TRUE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTCAATTATTGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	48279452	48193800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ENSMUSG00000028343.11_48193846_48279487_1	chr4	-	2030	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	71	523	71	-523	multi-exon	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGCTTTCTCTGTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	48279487	48193845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ENSMUSG00000028343.11_48193897_48279558_1	chr4	-	2050	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	0	574	0	-574	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAGCAGGGACCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	48279558	48193896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ENSMUSG00000028344.13_48307798_48390009_1	chr4	+	445	4	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	118	39712	118	-39712	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTCTGCACTTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	48307797	48390009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48307850_48382104_48382279_48385104_48385273_48389958
ENSMUSG00000028344.13_48382188_48392631_1	chr4	+	488	4	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	74508	37090	74508	-37090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCCCTTCGGACAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	48382187	48392631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48382279_48385104_48385273_48389958_48390140_48392583
ENSMUSG00000028344.13_48385198_48396316_1	chr4	+	448	4	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	77518	33405	77518	-33405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGAAAAGGCAATGACGAC	NA	NA	NA	NA	NA	NA	NA	NA	48385197	48396316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48385273_48389958_48390140_48392583_48392694_48396234
ENSMUSG00000028344.13_48385249_48396389_1	chr4	+	470	4	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	77569	33332	77569	-33332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTACGGAGGCACAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	48385248	48396389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48385273_48389958_48390140_48392583_48392694_48396234
ENSMUSG00000028344.13_48389977_48397536_1	chr4	+	477	4	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	82297	32185	82297	-32185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACCGTGAAGTTATTATT	NA	NA	NA	NA	NA	NA	NA	NA	48389976	48397536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48390140_48392583_48392694_48396234_48396407_48397504
ENSMUSG00000028344.13_48390080_48397660_1	chr4	+	498	4	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	82400	32061	82400	-32061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCTGGCACAAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	48390079	48397660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48390140_48392583_48392694_48396234_48396407_48397504
ENSMUSG00000028344.13_48392631_48398113_1	chr4	+	455	4	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	84951	31608	84951	-31608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAATGCTGACGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	48392630	48398113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48392694_48396234_48396407_48397504_48397661_48398049
ENSMUSG00000028344.13_48396339_48398279_1	chr4	+	454	3	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	88659	31442	88659	-31442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAACCCTAGGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	48396338	48398279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48396407_48397504_48397661_48398049
ENSMUSG00000028344.13_48397604_48407660_1	chr4	+	457	4	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	89924	22061	89924	-22061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCCCTGTCCATCG	NA	NA	NA	NA	NA	NA	NA	NA	48397603	48407660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48397661_48398049_48398280_48402832_48402940_48407597
ENSMUSG00000028344.13_48398160_48415925_1	chr4	+	460	4	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	90480	13796	90480	-13796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGGAAGGAAGCTGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	48398159	48415925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48398280_48402832_48402940_48407597_48407811_48415905
ENSMUSG00000028344.13_48398212_48415983_1	chr4	+	466	4	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	90532	13738	90532	-13738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGTTCATCTGCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	48398211	48415983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48398280_48402832_48402940_48407597_48407811_48415905
ENSMUSG00000028344.13_48402855_48416086_1	chr4	+	479	3	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	95175	13635	95175	-13635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGAGCCCTGACCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	48402854	48416086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48402940_48407597_48407811_48415905
ENSMUSG00000028344.13_48402903_48416154_1	chr4	+	499	3	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	95223	13567	95223	-13567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCCATAGACCTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	48402902	48416154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48402940_48407597_48407811_48415905
ENSMUSG00000028344.13_48407702_48421526_1	chr4	+	482	3	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	100022	8195	100022	-8195	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAACATCCTCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	48407701	48421526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48407811_48415905_48416199_48421446
ENSMUSG00000028344.13_48416011_48426075_1	chr4	+	477	4	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	108331	3646	108331	-3646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACAGCCCTGCTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	48416010	48426075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48416199_48421446_48421558_48422052_48422150_48425994
ENSMUSG00000028344.13_48416056_48426133_1	chr4	+	490	4	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	108376	3588	108376	-3588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATCTCAGTAAGCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	48416055	48426133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48416199_48421446_48421558_48422052_48422150_48425994
ENSMUSG00000028344.13_48416135_48426174_1	chr4	+	452	4	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	108455	3547	108455	-3547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGTCGGCCACAAAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	48416134	48426174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48416199_48421446_48421558_48422052_48422150_48425994
ENSMUSG00000028344.13_48421483_48427085_1	chr4	+	454	4	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	113803	2636	113803	-2636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGTGCTTCATCTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	48421482	48427085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48421558_48422052_48422150_48425994_48426225_48427033
ENSMUSG00000028344.13_48422072_48429702_1	chr4	+	481	4	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	114392	19	114392	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAACCCTGGAGGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	48422071	48429702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48422150_48425994_48426225_48427033_48427109_48429604
ENSMUSG00000028345.16_48430858_48433178_1	chr4	-	297	2	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	36888	3	36888	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	48433178	48430857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48431084_48433107
ENSMUSG00000028345.16_48430858_48458602_1	chr4	-	1166	8	ISM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	14857	0	11464	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	48458602	48430857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537
ENSMUSG00000028345.16_48430956_48458671_1	chr4	-	1137	8	ISM	ENSMUSG00000028345.16	ENSMUST00000164866.2	3203	16	14751	0	11395	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCTGTTTGAAGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	48458671	48430955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537
ENSMUSG00000028345.16_48431063_48435020_1	chr4	-	294	3	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	35046	208	35046	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGCAGTGGCTTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	48435020	48431062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48431084_48433107_48433262_48434901
ENSMUSG00000028345.16_48433207_48436466_1	chr4	-	267	3	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	33600	2352	33600	-2251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCCAGCTGCTTCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	48436466	48433206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48433262_48434901_48435084_48436436
ENSMUSG00000028345.16_48433264_48459958_1	chr4	-	1126	9	ISM	ENSMUSG00000028345.16	ENSMUST00000164866.2	3203	16	13464	2308	10108	-2308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTGATGCTGCAGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	48459958	48433263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863
ENSMUSG00000028345.16_48434900_48460102_1	chr4	-	1217	8	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	9964	4045	9964	-3944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTTACTTTATTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	48460102	48434899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863
ENSMUSG00000028345.16_48451949_48467739_1	chr4	-	1118	8	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	2327	21094	2327	-20993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACCACTGGGACATAACA	NA	NA	NA	NA	NA	NA	NA	NA	48467739	48451948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663
ENSMUSG00000028345.16_48452005_48467817_1	chr4	-	1140	8	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	2249	21150	2249	-21049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCAGACATCACTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	48467817	48452004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663
ENSMUSG00000028345.16_48458659_48468618_1	chr4	-	1122	6	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	1448	27804	1448	-27703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTGGCTCCCGAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	48468618	48458658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280
ENSMUSG00000028345.16_48459297_48468726_1	chr4	-	1129	5	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	1340	28442	1340	-28341	internal_fragment	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTAAGATCTATCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	48468726	48459296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280
ENSMUSG00000028345.16_48460016_48467754_1	chr4	-	291	3	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	2312	29161	2312	-29060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCAACCTTACAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	48467754	48460015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48460103_48462768_48462882_48467663
ENSMUSG00000028345.16_48460019_48468924_1	chr4	-	1082	4	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	1142	29164	1142	-29063	internal_fragment	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCTTCAACCTTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	48468924	48460018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48460103_48462768_48462882_48467663_48467905_48468280
ENSMUSG00000028345.16_48462811_48469996_1	chr4	-	1138	4	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	70	31956	70	-31855	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAATAACCAAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	48469996	48462810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48462882_48467663_48467905_48468280_48468994_48469883
ENSMUSG00000028345.16_48468839_48469996_1	chr4	-	268	2	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	70	37984	70	-37883	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTACGGTTAGCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	48469996	48468838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48468994_48469883
ENSMUSG00000028345.16_48468894_48470033_1	chr4	-	250	2	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	33	38039	33	-37938	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACCTCTCAAACATATTA	NA	NA	NA	NA	NA	NA	NA	NA	48470033	48468893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_48468994_48469883
ENSMUSG00000028347.15_48636934_48663131_1	chr4	+	1535	5	ISM	ENSMUSG00000028347.15	ENSMUST00000030032.13	2461	10	51760	0	51569	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTGCTTTGTGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	48636933	48663131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
ENSMUSG00000028348.8_48663625_48672946_1	chr4	+	1387	2	FSM	ENSMUSG00000028348.8	ENSMUST00000030033.5	2054	2	111	556	111	-556	multi-exon	TRUE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCAGTTAGATGATATG	NA	NA	NA	NA	NA	NA	NA	NA	48663624	48672946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_48664030_48671964
ENSMUSG00000028364.16_63878542_63889411_1	chr4	-	1095	8	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	49450	1	49450	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGGATCACTGAGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	63889411	63878541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63878781_63880223_63880388_63882834_63882997_63883820_63883918_63884747_63884900_63885453_63885587_63888550_63888682_63889394
ENSMUSG00000028364.16_63878604_63889468_1	chr4	-	1090	8	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	49393	63	49393	-63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAACACAACCAGTCTAACA	NA	NA	NA	NA	NA	NA	NA	NA	63889468	63878603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63878781_63880223_63880388_63882834_63882997_63883820_63883918_63884747_63884900_63885453_63885587_63888550_63888682_63889394
ENSMUSG00000028364.16_63878731_63890962_1	chr4	-	1081	9	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	47899	190	47899	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGATGAAACTGAGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	63890962	63878730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63878781_63880223_63880388_63882834_63882997_63883820_63883918_63884747_63884900_63885453_63885587_63888550_63888682_63889394_63889539_63890914
ENSMUSG00000028364.16_63880271_63893476_1	chr4	-	1094	9	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	45385	1730	45385	-1730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGTGTCAACCTGATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	63893476	63880270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63880388_63882834_63882997_63883820_63883918_63884747_63884900_63885453_63885587_63888550_63888682_63889394_63889539_63890914_63891035_63893438
ENSMUSG00000028364.16_63880372_63893577_1	chr4	-	1094	9	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	45284	1831	45284	-1831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAATGGTAGATCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	63893577	63880371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63880388_63882834_63882997_63883820_63883918_63884747_63884900_63885453_63885587_63888550_63888682_63889394_63889539_63890914_63891035_63893438
ENSMUSG00000028364.16_63882869_63894711_1	chr4	-	1078	9	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	44150	4328	44150	-4328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTGAAGGTAGAAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	63894711	63882868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63882997_63883820_63883918_63884747_63884900_63885453_63885587_63888550_63888682_63889394_63889539_63890914_63891035_63893438_63893583_63894682
ENSMUSG00000028364.16_63882914_63894772_1	chr4	-	1094	9	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	44089	4373	44089	-4373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTACGACAGATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	63894772	63882913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63882997_63883820_63883918_63884747_63884900_63885453_63885587_63888550_63888682_63889394_63889539_63890914_63891035_63893438_63893583_63894682
ENSMUSG00000028364.16_63883862_63924560_1	chr4	-	1081	9	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	14301	5321	14301	-5321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTGGGTTTGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	63924560	63883861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63883918_63884747_63884900_63885453_63885587_63888550_63888682_63889394_63889539_63890914_63891035_63893438_63893583_63894682_63894806_63924482
ENSMUSG00000028364.16_63884817_63924677_1	chr4	-	1073	8	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	14184	6276	14184	-6276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGGTGACAAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	63924677	63884816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63884900_63885453_63885587_63888550_63888682_63889394_63889539_63890914_63891035_63893438_63893583_63894682_63894806_63924482
ENSMUSG00000028364.16_63885454_63925677_1	chr4	-	1152	8	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	13184	6913	13184	-6913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGGGTTCAGAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	63925677	63885453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63885587_63888550_63888682_63889394_63889539_63890914_63891035_63893438_63893583_63894682_63894806_63924482_63924747_63925584
ENSMUSG00000028364.16_63888596_63926024_1	chr4	-	1077	8	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	12837	10055	12837	-10055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGATACCTCCTGGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	63926024	63888595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63888682_63889394_63889539_63890914_63891035_63893438_63893583_63894682_63894806_63924482_63924747_63925584_63925675_63925918
ENSMUSG00000028364.16_63888646_63926089_1	chr4	-	1092	8	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	12772	10105	12772	-10105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTCAGAAACTGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	63926089	63888645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63888682_63889394_63889539_63890914_63891035_63893438_63893583_63894682_63894806_63924482_63924747_63925584_63925675_63925918
ENSMUSG00000028364.16_63889465_63926908_1	chr4	-	1059	8	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	11953	10924	11953	-10924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCCTGAGTATCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	63926908	63889464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63889539_63890914_63891035_63893438_63893583_63894682_63894806_63924482_63924747_63925584_63925675_63925918_63926105_63926850
ENSMUSG00000028364.16_63893496_63931392_1	chr4	-	1108	7	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	7469	14955	7469	-14955	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGCCATGAAGGGATTC	NA	NA	NA	NA	NA	NA	NA	NA	63931392	63893495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63893583_63894682_63894806_63924482_63924747_63925584_63925675_63925918_63926105_63926850_63927121_63931304
ENSMUSG00000028364.16_63893549_63931456_1	chr4	-	1119	7	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	7405	15008	7405	-15008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAGACCAGGCTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	63931456	63893548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63893583_63894682_63894806_63924482_63924747_63925584_63925675_63925918_63926105_63926850_63927121_63931304
ENSMUSG00000028364.16_63894746_63932230_1	chr4	-	1092	7	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	6631	16205	6631	-16205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGGGCACCTACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	63932230	63894745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63894806_63924482_63924747_63925584_63925675_63925918_63926105_63926850_63927121_63931304_63931462_63932165
ENSMUSG00000028364.16_63924568_63933210_1	chr4	-	1077	7	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	5651	46027	5651	6338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCAGGGCAAGAATACAC	NA	NA	NA	NA	NA	NA	NA	NA	63933210	63924567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63924747_63925584_63925675_63925918_63926105_63926850_63927121_63931304_63931462_63932165_63932282_63933131
ENSMUSG00000028364.16_63924612_63933278_1	chr4	-	1101	7	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	5583	46071	5583	6294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCTGCCAAAGGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	63933278	63924611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63924747_63925584_63925675_63925918_63926105_63926850_63927121_63931304_63931462_63932165_63932282_63933131
ENSMUSG00000028364.16_63924678_63933321_1	chr4	-	1078	7	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	5540	46137	5540	6228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCTGGCCAAGTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	63933321	63924677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63924747_63925584_63925675_63925918_63926105_63926850_63927121_63931304_63931462_63932165_63932282_63933131
ENSMUSG00000028364.16_63926033_63935256_1	chr4	-	1068	6	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	3605	47492	3605	4873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGCAGACATCGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	63935256	63926032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63926105_63926850_63927121_63931304_63931462_63932165_63932282_63933131_63933396_63935067
ENSMUSG00000028364.16_63926913_63935391_1	chr4	-	1069	5	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	3470	48372	3470	3993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTCATCTCCCGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	63935391	63926912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63927121_63931304_63931462_63932165_63932282_63933131_63933396_63935067
ENSMUSG00000028364.16_63926970_63935449_1	chr4	-	1070	5	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	3412	48429	3412	3936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACGAAGACAACCAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	63935449	63926969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63927121_63931304_63931462_63932165_63932282_63933131_63933396_63935067
ENSMUSG00000028364.16_63927071_63935547_1	chr4	-	1067	5	ISM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	3314	48530	3314	3835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGATCACCTGGTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	63935547	63927070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63927121_63931304_63931462_63932165_63932282_63933131_63933396_63935067
ENSMUSG00000028364.16_63932183_63935808_1	chr4	-	1104	3	ISM	ENSMUSG00000028364.16	ENSMUST00000107371.2	2928	5	3154	1277	3053	-1277	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTCCGAAATATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	63935808	63932182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63932282_63933131_63933396_63935067
ENSMUSG00000028364.16_63935537_63938534_1	chr4	-	1095	2	ISM	ENSMUSG00000028364.16	ENSMUST00000107371.2	2928	5	428	4631	327	-4631	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGAGCTGTCCCAATGA	NA	NA	NA	NA	NA	NA	NA	NA	63938534	63935536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_63936478_63938380
ENSMUSG00000028378.7_58965439_58971056_1	chr4	-	1510	3	ISM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	16063	0	16063	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGGCTGTGCCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	58971056	58965438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58966764_58968758_58968878_58970990
ENSMUSG00000028378.7_58965620_58973602_1	chr4	-	1440	4	ISM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	13517	181	13517	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATTAAACCTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	58973602	58965619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534
ENSMUSG00000028378.7_58965722_58975913_1	chr4	-	1479	5	ISM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	11206	283	11206	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAAACATTTTGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	58975913	58965721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860
ENSMUSG00000028378.7_58965788_58975949_1	chr4	-	1449	5	ISM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	11170	349	11170	-349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGGAGTGTTAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	58975949	58965787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860
ENSMUSG00000028378.7_58965962_58981857_1	chr4	-	1503	7	ISM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	5262	523	5262	-523	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGAACTTGGTGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	58981857	58965961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826
ENSMUSG00000028378.7_58966110_58982925_1	chr4	-	1427	8	ISM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	4194	671	4194	-671	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTTCCTGGGTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	58982925	58966109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879
ENSMUSG00000028378.7_58966111_58984806_1	chr4	-	1489	9	ISM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	2313	672	2313	-672	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCATTTCCTGGGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	58984806	58966110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743
ENSMUSG00000028378.7_58966276_58987119_1	chr4	-	1459	10	FSM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	0	837	0	-837	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTCTAACCTGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	58987119	58966275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
ENSMUSG00000028381.9_59189558_59220672_1	chr4	+	1550	9	FSM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	301	2161	301	-2161	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAACAAATAAATATAT	NA	NA	NA	NA	NA	NA	NA	NA	59189557	59220672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222
ENSMUSG00000028381.9_59207761_59220855_1	chr4	+	1549	8	ISM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	18504	1978	18504	-1978	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAGTAAATGCTATACAG	NA	NA	NA	NA	NA	NA	NA	NA	59207760	59220855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222
ENSMUSG00000028381.9_59207865_59220958_1	chr4	+	1548	8	ISM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	18608	1875	18608	-1875	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATACGGTAGCTAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	59207864	59220958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222
ENSMUSG00000028381.9_59211958_59221115_1	chr4	+	1585	7	ISM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	22701	1718	22701	-1718	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	59211957	59221115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222
ENSMUSG00000028381.9_59213240_59221224_1	chr4	+	1592	6	ISM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	23983	1609	23983	-1609	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTGTCTTGAACCATAT	NA	NA	NA	NA	NA	NA	NA	NA	59213239	59221224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222
ENSMUSG00000028381.9_59217149_59221461_1	chr4	+	1582	4	ISM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	27892	1372	27892	-1372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAATATCTTTTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	59217148	59221461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59217215_59218494_59218582_59219488_59219679_59220222
ENSMUSG00000028381.9_59219577_59221702_1	chr4	+	1582	2	ISM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	30320	1131	30320	-1131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCTACACTTTCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	59219576	59221702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59219679_59220222
ENSMUSG00000028381.9_59219631_59221764_1	chr4	+	1590	2	ISM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	30374	1069	30374	-1069	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAACTGGACTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	59219630	59221764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59219679_59220222
ENSMUSG00000028383.18_59593237_59601476_1	chr4	+	521	5	ISM	ENSMUSG00000028383.18	ENSMUST00000107528.8	2626	12	11592	17212	11592	-17212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAAGTTTTACTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	59593236	59601476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59593336_59594395_59594511_59596862_59596967_59597256_59597356_59601372
ENSMUSG00000028383.18_59594456_59606500_1	chr4	+	482	5	ISM	ENSMUSG00000028383.18	ENSMUST00000107528.8	2626	12	12811	12188	12811	-12188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAACACCCAGATGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	59594455	59606500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59594511_59596862_59596967_59597256_59597356_59601372_59601568_59606471
ENSMUSG00000028383.18_59596918_59610567_1	chr4	+	473	5	ISM	ENSMUSG00000028383.18	ENSMUST00000107528.8	2626	12	15273	8121	15273	-8121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAGCCACAGCTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	59596917	59610567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509
ENSMUSG00000028383.18_59597302_59610670_1	chr4	+	482	4	ISM	ENSMUSG00000028383.18	ENSMUST00000107528.8	2626	12	15657	8018	15657	-8018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGGAGCAGCCACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	59597301	59610670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59597356_59601372_59601568_59606471_59606544_59610509
ENSMUSG00000028383.18_59601501_59610847_1	chr4	+	477	3	ISM	ENSMUSG00000028383.18	ENSMUST00000107528.8	2626	12	19856	7841	19856	-7841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTGTCTATCAGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	59601500	59610847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59601568_59606471_59606544_59610509
ENSMUSG00000028383.18_59610607_59617741_1	chr4	+	505	3	ISM	ENSMUSG00000028383.18	ENSMUST00000107528.8	2626	12	28962	947	28962	-947	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATGAAGGACAAGAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	59610606	59617741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59610876_59612681_59612811_59617634
ENSMUSG00000028383.18_59610794_59617913_1	chr4	+	490	3	ISM	ENSMUSG00000028383.18	ENSMUST00000107528.8	2626	12	29149	775	29149	-775	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATACAAGTTTAATTAAG	NA	NA	NA	NA	NA	NA	NA	NA	59610793	59617913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59610876_59612681_59612811_59617634
ENSMUSG00000028393.11_62427406_62432498_1	chr4	-	1140	11	NNC	ENSMUSG00000028393.11	novel	1247	12	NA	NA	5633	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	62432498	62427405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429842_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310
ENSMUSG00000028393.11_62427406_62432498_2	chr4	-	1139	11	NNC	ENSMUSG00000028393.11	novel	1247	12	NA	NA	5633	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	62432498	62427405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431116_62431205_62431768_62431820_62432310
ENSMUSG00000028393.11_62427406_62432498_3	chr4	-	1142	11	NNC	ENSMUSG00000028393.11	novel	1247	12	NA	NA	5633	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	62432498	62427405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430013_62430119_62430260_62431107_62431205_62431768_62431820_62432310
ENSMUSG00000028393.11_62427406_62432498_4	chr4	-	1140	11	NNC	ENSMUSG00000028393.11	novel	1247	12	NA	NA	5633	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	62432498	62427405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429011_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310
ENSMUSG00000028393.11_62427406_62438139_1	chr4	-	1186	12	NNC	ENSMUSG00000028393.11	novel	1206	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	62438139	62427405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429011_62429100_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
ENSMUSG00000028393.11_62427406_62438139_2	chr4	-	1186	12	NNC	ENSMUSG00000028393.11	novel	1206	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	62438139	62427405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429842_62429934_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
ENSMUSG00000028393.11_62427406_62438139_3	chr4	-	1181	12	NNC	ENSMUSG00000028393.11	novel	1206	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	62438139	62427405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430251_62431107_62431205_62431768_62431820_62432310_62432498_62438096
ENSMUSG00000028393.11_62427406_62438139_4	chr4	-	1182	12	NNC	ENSMUSG00000028393.11	novel	1206	12	NA	NA	-8	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	62438139	62427405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431776_62431820_62432310_62432498_62438096
ENSMUSG00000028393.11_62427406_62438139_5	chr4	-	1185	12	NNC	ENSMUSG00000028393.11	novel	1206	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	62438139	62427405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432315_62432498_62438096
ENSMUSG00000028393.11_62427406_62438139_6	chr4	-	1183	12	NNC	ENSMUSG00000028393.11	novel	1206	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	62438139	62427405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_62427548_62428341_62428472_62428751_62428832_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
ENSMUSG00000028393.11_62427406_62438139_7	chr4	-	1181	12	NNC	ENSMUSG00000028393.11	novel	1206	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	62438139	62427405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_62427548_62428341_62428463_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
ENSMUSG00000028393.11_62427406_62438139_8	chr4	-	1183	12	NNC	ENSMUSG00000028393.11	novel	1206	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	62438139	62427405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432491_62438096
ENSMUSG00000028394.10_62442072_62443002_1	chr4	-	411	3	ISM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	303	1186	303	-1186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGATCAAAATAAAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	62443002	62442071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_62442348_62442554_62442674_62442986
ENSMUSG00000028394.10_62442245_62443275_1	chr4	-	416	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	30	1359	30	-1359	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAGGATGAAGAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	62443275	62442244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
ENSMUSG00000028399.19_76058331_76058940_1	chr4	-	509	2	ISM	ENSMUSG00000028399.19	ENST00000463477.5	796	4	106195	0	-6821	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATAATTCAGTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	76058940	76058330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_76058650_76058750
ENSMUSG00000028399.19_76058595_76165024_1	chr4	-	421	4	FSM	ENSMUSG00000028399.19	ENST00000463477.5	796	4	111	264	111	-264	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCCATGGCCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	76165024	76058594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_76058650_76058750_76058940_76161881_76162024_76164989
ENSMUSG00000028405.10_40143081_40177950_1	chr4	+	1461	8	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	0	20388	0	-20388	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAAGGGCTGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	40143080	40177950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778
ENSMUSG00000028405.10_40143376_40180240_1	chr4	+	1336	10	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	295	18098	295	-18098	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGGTGTCTGAGATGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	40143375	40180240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171
ENSMUSG00000028405.10_40163719_40182879_1	chr4	+	1454	11	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	20638	15459	20638	-15459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGGTCACCTACTACC	NA	NA	NA	NA	NA	NA	NA	NA	40163718	40182879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803
ENSMUSG00000028405.10_40167098_40184978_1	chr4	+	1337	11	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	24017	13360	24017	-13360	internal_fragment	TRUE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTAGCATCCCCCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	40167097	40184978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900
ENSMUSG00000028405.10_40175921_40188239_1	chr4	+	1372	11	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	32840	10099	32840	-10099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAAGTCGCCACCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	40175920	40188239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165
ENSMUSG00000028405.10_40177870_40190862_1	chr4	+	1336	11	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	34789	7476	34789	-7476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTCCCCTCAGGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	40177869	40190862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736
ENSMUSG00000028405.10_40180211_40196404_1	chr4	+	1420	11	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	37130	1934	37130	-1934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCGCATGACGGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	40180210	40196404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244
ENSMUSG00000028405.10_40180246_40196405_1	chr4	+	1386	11	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	37165	1933	37165	-1933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCGCATGACGGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	40180245	40196405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244
ENSMUSG00000028405.10_40182837_40197729_1	chr4	+	1351	10	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	39756	609	39756	-609	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGAGGCCTGGCAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	40182836	40197729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
ENSMUSG00000028405.10_40185000_40198016_1	chr4	+	1351	8	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	41919	322	41919	-322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTGTGTTTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	40184999	40198016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
ENSMUSG00000028405.10_40186410_40198150_1	chr4	+	1333	7	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	43329	188	43329	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAAGTGAACAAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	40186409	40198150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
ENSMUSG00000028409.12_40736856_40738355_1	chr4	-	606	2	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	19568	314	19568	-314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTCATAAAATTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	40738355	40736855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40737396_40738289
ENSMUSG00000028409.12_40736980_40739561_1	chr4	-	612	3	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	18362	438	18362	-438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAAATATCAGTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	40739561	40736979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40737396_40738289_40738443_40739518
ENSMUSG00000028409.12_40737028_40739615_1	chr4	-	618	3	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	18308	486	18308	-486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGACACACACAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	40739615	40737027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40737396_40738289_40738443_40739518
ENSMUSG00000028409.12_40737148_40743050_1	chr4	-	605	4	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	14873	606	14873	-606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATTTTAATAAACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	40743050	40737147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014
ENSMUSG00000028409.12_40737274_40744062_1	chr4	-	602	5	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	13861	732	13861	-732	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCATGTACTTAAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	40744062	40737273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030
ENSMUSG00000028409.12_40737316_40744121_1	chr4	-	619	5	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	13802	774	13802	-774	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTCTGGAAACCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	40744121	40737315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030
ENSMUSG00000028409.12_40737377_40744158_1	chr4	-	595	5	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	13765	835	13765	-835	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAATCGCACACCACCCG	NA	NA	NA	NA	NA	NA	NA	NA	40744158	40737376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030
ENSMUSG00000028409.12_40738288_40745568_1	chr4	-	695	5	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	12355	1746	12355	-1746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACAGCTCTGGGAACGT	NA	NA	NA	NA	NA	NA	NA	NA	40745568	40738287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451
ENSMUSG00000028409.12_40738388_40748583_1	chr4	-	640	6	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	9340	1846	9340	-1846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCCCCTCGTGGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	40748583	40738387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538
ENSMUSG00000028409.12_40739541_40751980_1	chr4	-	694	6	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	5943	2999	5943	-2999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCATGAACATGCAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	40751980	40739540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924
ENSMUSG00000028409.12_40739637_40751987_1	chr4	-	605	6	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	5936	3095	5936	-3095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTACTGCAGGGACAGATA	NA	NA	NA	NA	NA	NA	NA	NA	40751987	40739636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924
ENSMUSG00000028409.12_40739672_40752053_1	chr4	-	636	6	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	5870	3130	5870	-3130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCACAGAATGCTCAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	40752053	40739671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924
ENSMUSG00000028409.12_40743078_40753546_1	chr4	-	618	6	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	4377	6536	4377	-6536	internal_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAACGTTTACACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	40753546	40743077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486
ENSMUSG00000028409.12_40744047_40754527_1	chr4	-	609	6	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	3396	7505	3396	-7505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACCAGACAATACGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	40754527	40744046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507
ENSMUSG00000028409.12_40744082_40754593_1	chr4	-	640	6	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	3330	7540	3330	-7540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGGACAGCAGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	40754593	40744081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507
ENSMUSG00000028409.12_40744146_40754635_1	chr4	-	618	6	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	3288	7604	3288	-7604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGGACAGTGTTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	40754635	40744145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507
ENSMUSG00000028409.12_40745514_40755662_1	chr4	-	604	6	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	2261	8972	2261	-8972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGTTTCAGCAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	40755662	40745513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626
ENSMUSG00000028409.12_40748576_40755764_1	chr4	-	614	5	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	2159	12034	2159	-12034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTGTGGAACTTCACTA	NA	NA	NA	NA	NA	NA	NA	NA	40755764	40748575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626
ENSMUSG00000028409.12_40751925_40757831_1	chr4	-	659	5	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	92	15383	92	-15383	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGGAATACCTTCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	40757831	40751924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
ENSMUSG00000028410.14_40722480_40734284_1	chr4	+	2696	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	0	680	0	-680	multi-exon	FALSE	canonical	NA	NA	NA	NA	1656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCCCATCTCTCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	40722479	40734284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ENSMUSG00000028410.14_40723702_40734413_1	chr4	+	2672	8	ISM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	1222	551	780	-551	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCTAGGAATGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	40723701	40734413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ENSMUSG00000028410.14_40724049_40734601_1	chr4	+	2641	7	ISM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	1569	363	1127	-363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATAGCCTTAAACACGA	NA	NA	NA	NA	NA	NA	NA	NA	40724048	40734601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ENSMUSG00000028410.14_40726103_40734704_1	chr4	+	2644	6	ISM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	3623	260	3181	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGGATAAGGCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	40726102	40734704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ENSMUSG00000028410.14_40726145_40734764_1	chr4	+	2662	6	ISM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	3665	200	3223	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGTTGATAGTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	40726144	40734764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ENSMUSG00000028410.14_40726164_40734846_1	chr4	+	2725	6	ISM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	3684	118	3242	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTAAAAGCATAATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	40726163	40734846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ENSMUSG00000028410.14_40728029_40734964_1	chr4	+	2724	5	ISM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	5549	0	5107	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGCTGTTCAGCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	40728028	40734964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ENSMUSG00000028411.16_40682382_40691082_1	chr4	-	4550	3	ISM	ENSMUSG00000028411.16	ENST00000379813.7	940	6	6265	-4186	6265	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTAGTGTCATGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	40691082	40682381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40686714_40688108_40688213_40690968
ENSMUSG00000028411.16_40682382_40691160_1	chr4	-	4628	3	ISM	ENSMUSG00000028411.16	ENST00000379813.7	940	6	6187	-4186	6187	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTAGTGTCATGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	40691160	40682381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40686714_40688108_40688213_40690968
ENSMUSG00000028411.16_40682619_40694932_1	chr4	-	4567	5	ISM	ENSMUSG00000028411.16	ENST00000436040.7	838	6	2415	-3949	2415	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAACTTGCCCCTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	40694932	40682618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851
ENSMUSG00000028411.16_40682762_40695042_1	chr4	-	4534	5	ISM	ENSMUSG00000028411.16	ENST00000436040.7	838	6	2305	-3806	2305	-380	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTAGTTTGTGGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	40695042	40682761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851
ENSMUSG00000028411.16_40682936_40697250_1	chr4	-	4535	7	ISM	ENSMUSG00000028411.16	ENSMUST00000068125.11	5383	8	5664	554	97	-554	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATGAGACCCCTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	40697250	40682935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695424_40697216
ENSMUSG00000028411.16_40686568_40694923_1	chr4	-	549	4	ISM	ENSMUSG00000028411.16	ENST00000379813.7	940	6	2424	0	2424	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGGTGACACTCGTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	40694923	40686567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40686714_40688108_40688213_40690968_40691196_40694851
ENSMUSG00000028411.16_40686568_40697329_1	chr4	-	865	7	FSM	ENSMUSG00000028411.16	ENST00000477119.2	883	7	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGGTGACACTCGTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	40697329	40686567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695020_40695376_40695424_40697216
ENSMUSG00000028411.16_40686641_40695139_1	chr4	-	692	4	ISM	ENSMUSG00000028411.16	ENST00000379813.7	940	6	2208	73	2208	-73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGTTGCCATGAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	40695139	40686640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40686714_40688108_40688213_40690968_40691196_40694851
ENSMUSG00000028411.16_40686641_40697260_1	chr4	-	723	7	FSM	ENSMUSG00000028411.16	ENST00000477119.2	883	7	87	73	87	-73	multi-exon	FALSE	canonical	NA	NA	NA	NA	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGTTGCCATGAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	40697260	40686640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695020_40695376_40695424_40697216
ENSMUSG00000028411.16_40688109_40697260_1	chr4	-	707	5	ISM	ENSMUSG00000028411.16	ENST00000379813.7	940	6	87	1541	87	-1541	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATATTTTCTGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	40697260	40688108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40688213_40690968_40691196_40694851_40695137_40695376_40695424_40697216
ENSMUSG00000028411.16_40691132_40694916_1	chr4	-	189	3	ISM	ENSMUSG00000028411.16	ENST00000436040.7	838	6	2431	4564	2431	-4564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTTACCGTGGGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	40694916	40691131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40691196_40693389_40693450_40694851
ENSMUSG00000028411.16_40694851_40697260_1	chr4	-	215	2	ISM	ENSMUSG00000028411.16	ENST00000436040.7	838	6	87	8283	87	-8283	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATGGTGTGCTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	40697260	40694850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40695022_40697216
ENSMUSG00000028413.14_40806920_40807747_1	chr4	-	413	2	ISM	ENSMUSG00000028413.14	ENSMUST00000030121.13	3983	6	46258	2318	46258	2234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTGTACACAGTTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	40807747	40806919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40807318_40807732
ENSMUSG00000028413.14_40806986_40807808_1	chr4	-	408	2	ISM	ENSMUSG00000028413.14	ENSMUST00000030121.13	3983	6	46197	2384	46197	2168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGGAGTGTAAAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	40807808	40806985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40807318_40807732
ENSMUSG00000028413.14_40807189_40812729_1	chr4	-	402	4	ISM	ENSMUSG00000028413.14	ENSMUST00000030121.13	3983	6	41276	2587	41276	1965	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCATTTTTAGTACCAAT	NA	NA	NA	NA	NA	NA	NA	NA	40812729	40807188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40807318_40807732_40807838_40809678_40809802_40812684
ENSMUSG00000028413.14_40807731_40812872_1	chr4	-	418	3	ISM	ENSMUSG00000028413.14	ENSMUST00000030121.13	3983	6	41133	3129	41133	1423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTCCTCTCTGTGCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	40812872	40807730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40807838_40809678_40809802_40812684
ENSMUSG00000028413.14_40809683_40823464_1	chr4	-	333	3	ISM	ENSMUSG00000028413.14	ENSMUST00000108096.3	1413	5	30541	529	30541	-529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTAATGCTCACAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	40823464	40809682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40809802_40812684_40812873_40823438
ENSMUSG00000028413.14_40809774_40823608_1	chr4	-	386	3	ISM	ENSMUSG00000028413.14	ENSMUST00000108096.3	1413	5	30397	620	30397	-620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTGCTCTCAGTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	40823608	40809773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40809802_40812684_40812873_40823438
ENSMUSG00000028413.14_40812795_40853454_1	chr4	-	378	3	ISM	ENSMUSG00000028413.14	ENSMUST00000108096.3	1413	5	551	3641	551	-3641	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTGTTCAGTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	40853454	40812794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40812873_40823438_40823675_40853390
ENSMUSG00000028413.14_40823554_40853634_1	chr4	-	365	2	ISM	ENSMUSG00000028413.14	ENSMUST00000108096.3	1413	5	371	14400	371	-14400	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCATCATCATCCCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	40853634	40823553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40823675_40853390
ENSMUSG00000028413.14_40823606_40853691_1	chr4	-	370	2	ISM	ENSMUSG00000028413.14	ENSMUST00000108096.3	1413	5	314	14452	314	-14452	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGACGGGCGGCCGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	40853691	40823605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40823675_40853390
ENSMUSG00000028414.18_53720005_53737659_1	chr4	+	880	5	ISM	ENSMUSG00000028414.18	ENST00000675668.1	1332	9	-44	13082	0	-13082	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAGAAACAACCAAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	53720004	53737659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526
ENSMUSG00000028414.18_53720141_53744677_1	chr4	+	803	6	ISM	ENSMUSG00000028414.18	ENST00000675668.1	1332	9	92	6064	92	-6064	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCAACTAGCAGCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	53720140	53744677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618
ENSMUSG00000028414.18_53720191_53744730_1	chr4	+	806	6	ISM	ENSMUSG00000028414.18	ENST00000675668.1	1332	9	142	6011	142	-6011	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGGACTTGTCTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	53720190	53744730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618
ENSMUSG00000028414.18_53730016_53747034_1	chr4	+	795	6	ISM	ENSMUSG00000028414.18	ENST00000675668.1	1332	9	9967	3707	9967	-3707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTACAGCAAAGATGTCGA	NA	NA	NA	NA	NA	NA	NA	NA	53730015	53747034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008
ENSMUSG00000028414.18_53731131_53747142_1	chr4	+	880	5	ISM	ENSMUSG00000028414.18	ENST00000675668.1	1332	9	11082	3599	11082	-3599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGTAATAGTCAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	53731130	53747142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008
ENSMUSG00000028414.18_53731274_53750571_1	chr4	+	799	6	NNC	ENSMUSG00000028414.18	novel	1332	9	NA	NA	11225	-170	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGCAGTGAGGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	53731273	53750571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747153_53750519
ENSMUSG00000028414.18_53731317_53750640_1	chr4	+	825	6	NNC	ENSMUSG00000028414.18	novel	1332	9	NA	NA	11268	-101	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGAAGGCAGAGAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	53731316	53750640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747153_53750519
ENSMUSG00000028414.18_53734961_53750735_1	chr4	+	790	5	NNC	ENSMUSG00000028414.18	novel	1332	9	NA	NA	14912	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATACAGGATGTACCAC	NA	NA	NA	NA	NA	NA	NA	NA	53734960	53750735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_53735128_53737526_53737660_53744618_53744749_53747008_53747153_53750519
ENSMUSG00000028414.18_53734979_53750742_1	chr4	+	769	5	NIC	ENSMUSG00000028414.18	novel	1332	9	NA	NA	14930	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGTACCACACGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	53734978	53750742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_53735128_53737526_53737660_53744618_53744749_53747008_53747143_53750519
ENSMUSG00000028414.18_53734992_53750742_1	chr4	+	766	5	NNC	ENSMUSG00000028414.18	novel	1332	9	NA	NA	14943	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGTACCACACGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	53734991	53750742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_53735128_53737526_53737660_53744618_53744749_53747008_53747153_53750519
ENSMUSG00000028416.14_40936401_40948243_1	chr4	-	1289	7	NNC	ENSMUSG00000028416.14	novel	1295	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTTGGCTCTGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	40948243	40936400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_40936667_40937127_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
ENSMUSG00000028416.14_40936401_40948281_1	chr4	-	1325	7	NNC	ENSMUSG00000028416.14	novel	1336	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1810	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTTGGCTCTGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	40948281	40936400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946290_40947721
ENSMUSG00000028416.14_40936401_40948281_2	chr4	-	1327	7	NNC	ENSMUSG00000028416.14	novel	1336	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTTGGCTCTGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	40948281	40936400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_40936677_40937137_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
ENSMUSG00000028419.6_40948543_40949510_1	chr4	+	191	2	ISM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	136	15793	84	-15793	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAATATAAGGATCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	40948542	40949510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40948677_40949453
ENSMUSG00000028419.6_40948635_40964622_1	chr4	+	497	7	FSM	ENSMUSG00000028419.6	ENST00000419016.6	1415	7	176	742	176	-681	multi-exon	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGCAGATTCCCGCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	40948634	40964622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40964594
ENSMUSG00000028419.6_40952991_40964944_1	chr4	+	522	3	ISM	ENSMUSG00000028419.6	ENST00000419016.6	1415	7	4532	420	4532	-359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAGACTCTGAATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	40952990	40964944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40953054_40958889_40958999_40964594
ENSMUSG00000028419.6_40953035_40965032_1	chr4	+	566	3	ISM	ENSMUSG00000028419.6	ENST00000419016.6	1415	7	4576	332	4576	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGATAGTATGCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	40953034	40965032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40953054_40958889_40958999_40964594
ENSMUSG00000028419.6_40958980_40965075_1	chr4	+	500	2	ISM	ENSMUSG00000028419.6	ENST00000419016.6	1415	7	10521	289	10521	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGGTTTAAGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	40958979	40965075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40958999_40964594
ENSMUSG00000028419.6_40960856_40964685_1	chr4	+	207	2	ISM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	12449	618	12397	-618	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTCTGGGACTAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	40960855	40964685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_40960972_40964594
ENSMUSG00000028420.14_53826057_53862019_2	chr4	+	2844	6	NNC	ENSMUSG00000028420.14	novel	2862	6	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGGTATTCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	53826056	53862019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_53826221_53840626_53840784_53848865_53849051_53850479_53850562_53854311_53854430_53859881
ENSMUSG00000028426.11_55350090_55390245_1	chr4	+	1771	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	47	1992	47	-1992	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTCTAAGCAGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	55350089	55390245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ENSMUSG00000028426.11_55366807_55390573_1	chr4	+	1731	9	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	16764	1664	16764	-1664	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACGAAAATAATTACTGC	NA	NA	NA	NA	NA	NA	NA	NA	55366806	55390573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ENSMUSG00000028426.11_55370289_55390776_1	chr4	+	1717	7	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	20246	1461	20246	-1461	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGATGTATCCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55370288	55390776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ENSMUSG00000028426.11_55370342_55390848_1	chr4	+	1736	7	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	20299	1389	20299	-1389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCCTCCCCTCCCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	55370341	55390848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ENSMUSG00000028426.11_55378234_55390987_1	chr4	+	1744	6	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	28191	1250	28191	-1250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGATGTTTTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	55378233	55390987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ENSMUSG00000028426.11_55381032_55391089_1	chr4	+	1747	5	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	30989	1148	30989	-1148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTACTGCATTTAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	55381031	55391089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ENSMUSG00000028426.11_55381093_55391129_1	chr4	+	1726	5	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	31050	1108	31050	-1108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGAGATGTGGCTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	55381092	55391129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ENSMUSG00000028426.11_55382543_55391288_1	chr4	+	1798	4	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	32500	949	32500	-949	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAGGGGCCCAGTATCA	NA	NA	NA	NA	NA	NA	NA	NA	55382542	55391288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_55382616_55383586_55383715_55385409_55385602_55389883
ENSMUSG00000028426.11_55383689_55391419_1	chr4	+	1754	3	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	33646	818	33646	-818	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCTTGCACTGTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	55383688	55391419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_55383715_55385409_55385602_55389883
ENSMUSG00000028426.11_55385535_55391563_1	chr4	+	1747	2	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	35492	674	35492	-674	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTAGGCTGTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	55385534	55391563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_55385602_55389883
ENSMUSG00000028427.14_41034775_41035630_1	chr4	-	454	3	ISM	ENSMUSG00000028427.14	ENSMUST00000054945.8	2154	6	9818	1701	9818	-68	internal_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGGCAAACAAGTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	41035630	41034774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_41034972_41035134_41035254_41035492
ENSMUSG00000028427.14_41034893_41036137_1	chr4	-	460	4	ISM	ENSMUSG00000028427.14	ENSMUST00000054945.8	2154	6	9311	1819	9311	-186	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTCGTGATAGGCATC	NA	NA	NA	NA	NA	NA	NA	NA	41036137	41034892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_41034972_41035134_41035254_41035492_41035631_41036013
ENSMUSG00000028427.14_41035490_41047885_1	chr4	-	457	4	ISM	ENSMUSG00000028427.14	ENST00000624075.3	1019	6	181	783	181	-783	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTCTTCCTGGATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	41047885	41035489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_41035631_41036013_41036138_41045279_41045398_41047811
ENSMUSG00000028435.9_41093479_41098183_1	chr4	-	785	5	NNC	ENSMUSG00000028435.9	novel	737	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGGACCAGTCCCCGAAA	NA	NA	NA	NA	NA	NA	NA	NA	41098183	41093478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_41093703_41094265_41094385_41094700_41094839_41095149_41095272_41098001
ENSMUSG00000028435.9_41093479_41098183_2	chr4	-	790	5	FSM	ENSMUSG00000028435.9	ENST00000645858.1	737	5	-53	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGGACCAGTCCCCGAAA	NA	NA	NA	NA	NA	NA	NA	NA	41098183	41093478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_41093703_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ENSMUSG00000028436.9_41293986_41296344_1	chr4	-	160	2	ISM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	18545	2686	18545	-2686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCAGACTCGCAGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	41296344	41293985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_41294112_41296310
ENSMUSG00000028436.9_41294095_41296454_1	chr4	-	161	2	ISM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	18435	2795	18435	-2795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTATGAACACATTATCAC	NA	NA	NA	NA	NA	NA	NA	NA	41296454	41294094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_41294112_41296310
ENSMUSG00000028436.9_41302686_41313237_1	chr4	-	162	2	ISM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	1652	11386	1652	-11386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGAGGAGACAACCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	41313237	41302685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_41302821_41313210
ENSMUSG00000028437.15_41348996_41389078_1	chr4	+	1968	6	FSM	ENSMUSG00000028437.15	ENST00000625521.2	1961	6	-7	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCTTTCAGAAGGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	41348995	41389078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_41349232_41371724_41371850_41378946_41379871_41387174_41387358_41388095_41388198_41388680
ENSMUSG00000028437.15_41349048_41379801_1	chr4	+	1205	4	ISM	ENSMUSG00000028437.15	ENSMUST00000108060.10	2514	6	52	9965	45	-9277	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGCCTTCCCTGTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	41349047	41379801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_41349232_41366889_41366931_41371724_41371850_41378946
ENSMUSG00000028437.15_41349171_41379840_1	chr4	+	1121	4	ISM	ENSMUSG00000028437.15	ENSMUST00000108060.10	2514	6	175	9926	168	-9238	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCATCACCTCCAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	41349170	41379840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_41349232_41366889_41366931_41371724_41371850_41378946
ENSMUSG00000028437.15_41379780_41389470_1	chr4	+	1166	4	ISM	ENSMUSG00000028437.15	ENST00000625521.2	1961	6	30777	-392	30777	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGCTGTCAGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	41379779	41389470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_41379871_41387174_41387358_41388095_41388198_41388680
ENSMUSG00000028437.15_41387272_41389610_1	chr4	+	1118	3	ISM	ENSMUSG00000028437.15	ENST00000625521.2	1961	6	38269	-532	38269	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCTAGGCATAGAAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	41387271	41389610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_41387358_41388095_41388198_41388680
ENSMUSG00000028437.15_41387291_41389766_1	chr4	+	1255	3	ISM	ENSMUSG00000028437.15	ENST00000625521.2	1961	6	38288	-688	38288	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGCTGCCTTAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	41387290	41389766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_41387358_41388095_41388198_41388680
ENSMUSG00000028439.15_41517691_41569519_1	chr4	-	889	7	NNC	ENSMUSG00000028439.15	novel	890	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCGGCTCCTTACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	41569519	41517690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_41517855_41520303_41520399_41520911_41520967_41521611_41521693_41521867_41521970_41524365_41524415_41569176
ENSMUSG00000028439.15_41517691_41569519_3	chr4	-	888	7	NNC	ENSMUSG00000028439.15	novel	890	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCGGCTCCTTACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	41569519	41517690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_41517855_41520303_41520399_41520911_41520967_41521613_41521693_41521866_41521970_41524365_41524415_41569176
ENSMUSG00000028439.15_41517691_41569519_4	chr4	-	890	7	FSM	ENSMUSG00000028439.15	ENST00000379084.5	890	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCGGCTCCTTACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	41569519	41517690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_41517855_41520303_41520399_41520911_41520967_41521611_41521693_41521866_41521970_41524365_41524415_41569176
ENSMUSG00000028439.15_41517691_41569519_5	chr4	-	888	7	NNC	ENSMUSG00000028439.15	novel	890	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCGGCTCCTTACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	41569519	41517690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_41517855_41520303_41520399_41520911_41520967_41521611_41521693_41521866_41521968_41524365_41524415_41569176
ENSMUSG00000028439.15_41521474_41569519_1	chr4	-	765	4	FSM	ENSMUSG00000028439.15	ENST00000379078.1	765	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGGGGTGGGTTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	41569519	41521473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_41521693_41521866_41521970_41524314_41524415_41569176
ENSMUSG00000028441.13_41505009_41517181_1	chr4	-	962	7	FSM	ENSMUSG00000028441.13	ENSMUST00000030152.13	1114	7	152	0	150	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGCTGTGTCCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	41517181	41505008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_41505169_41505567_41505655_41507098_41507329_41507520_41507594_41508516_41508630_41511431_41511577_41517027
ENSMUSG00000028441.13_41505592_41507218_1	chr4	-	185	2	ISM	ENSMUSG00000028441.13	ENST00000379124.5	582	4	407	581	407	-581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTACCCGTATCCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	41507218	41505591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_41505652_41507093
ENSMUSG00000028443.7_41477513_41480926_1	chr4	+	816	2	ISM	ENSMUSG00000028443.7	ENSMUST00000030154.7	845	3	12362	0	12362	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGATGCTTTCTTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	41477512	41480926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_41477648_41480245
ENSMUSG00000028447.12_41714798_41723163_1	chr4	-	960	7	NNC	ENSMUSG00000028447.12	novel	973	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACAGTGGGGCATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	41723163	41714797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_41715260_41715395_41715450_41716395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723034
ENSMUSG00000028447.12_41714798_41723163_2	chr4	-	960	7	NNC	ENSMUSG00000028447.12	novel	973	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACAGTGGGGCATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	41723163	41714797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_41715260_41715395_41715456_41716395_41716455_41717356_41717441_41719836_41719918_41720782_41720868_41723034
ENSMUSG00000028447.12_41715157_41723163_1	chr4	-	523	6	FSM	ENSMUSG00000028447.12	ENST00000378916.8	492	6	-31	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCCACCAGGGGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	41723163	41715156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_41715260_41715395_41715456_41716395_41716455_41719836_41719924_41720782_41720868_41723034
ENSMUSG00000028447.12_41715157_41723163_2	chr4	-	517	6	NNC	ENSMUSG00000028447.12	novel	492	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCCACCAGGGGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	41723163	41715156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_41715260_41715395_41715450_41716395_41716455_41719836_41719924_41720782_41720868_41723034
ENSMUSG00000028447.12_41715157_41723163_3	chr4	-	517	6	NNC	ENSMUSG00000028447.12	novel	492	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCCACCAGGGGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	41723163	41715156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_41715260_41715395_41715456_41716395_41716455_41719836_41719918_41720782_41720868_41723034
ENSMUSG00000028452.8_42979963_42980949_1	chr4	-	828	2	ISM	ENSMUSG00000028452.8	ENST00000417448.2	3305	17	19053	-57	19053	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCGTTCTGGCCACTAT	NA	NA	NA	NA	NA	NA	NA	NA	42980949	42979962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42980635_42980793
ENSMUSG00000028452.8_42979963_42983151_1	chr4	-	937	3	ISM	ENSMUSG00000028452.8	ENST00000679647.1	2893	16	17303	-13	16851	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCGTTCTGGCCACTAT	NA	NA	NA	NA	NA	NA	NA	NA	42983151	42979962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42980510_42982607_42982687_42982840
ENSMUSG00000028452.8_42980069_42983466_1	chr4	-	932	4	ISM	ENSMUSG00000028452.8	ENST00000679647.1	2893	16	16988	93	16536	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTTACTGTTGGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	42983466	42980068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42980510_42982607_42982687_42982840_42983150_42983363
ENSMUSG00000028452.8_42980088_42982578_1	chr4	-	750	3	ISM	ENSMUSG00000028452.8	ENST00000417448.2	3305	17	17424	68	17424	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATTTTACATGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	42982578	42980087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42980635_42980793_42980949_42982530
ENSMUSG00000028452.8_42980109_42983533_1	chr4	-	959	4	ISM	ENSMUSG00000028452.8	ENST00000679647.1	2893	16	16921	133	16469	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATATAGAAAGTAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	42983533	42980108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42980510_42982607_42982687_42982840_42983150_42983363
ENSMUSG00000028452.8_42980146_42982622_1	chr4	-	736	3	ISM	ENSMUSG00000028452.8	ENST00000417448.2	3305	17	17380	126	17380	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTAGGTGGATGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	42982622	42980145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42980635_42980793_42980949_42982530
ENSMUSG00000028452.8_42980201_42982669_1	chr4	-	728	3	ISM	ENSMUSG00000028452.8	ENST00000417448.2	3305	17	17333	181	17333	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACAGTAAAGCATCTATAC	NA	NA	NA	NA	NA	NA	NA	NA	42982669	42980200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42980635_42980793_42980949_42982530
ENSMUSG00000028452.8_42980348_42982962_1	chr4	-	720	4	ISM	ENSMUSG00000028452.8	ENST00000417448.2	3305	17	17040	328	17040	-328	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGATAAAATAAAAGTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	42982962	42980347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840
ENSMUSG00000028452.8_42980395_42983019_1	chr4	-	730	4	ISM	ENSMUSG00000028452.8	ENST00000417448.2	3305	17	16983	375	16983	-375	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGGACAGGGGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	42983019	42980394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840
ENSMUSG00000028452.8_42980473_42983107_1	chr4	-	740	4	ISM	ENSMUSG00000028452.8	ENST00000417448.2	3305	17	16895	453	16895	-453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGCTTGCCCAAGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	42983107	42980472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840
ENSMUSG00000028452.8_42980580_42983422_1	chr4	-	734	5	ISM	ENSMUSG00000028452.8	ENST00000417448.2	3305	17	16580	560	16580	-560	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTGGCAGTGTGTACAC	NA	NA	NA	NA	NA	NA	NA	NA	42983422	42980579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363
ENSMUSG00000028452.8_42980911_42984331_1	chr4	-	744	5	ISM	ENSMUSG00000028452.8	ENST00000417448.2	3305	17	15671	891	15671	-891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCACTTTGAGGAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	42984331	42980910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303
ENSMUSG00000028452.8_42983042_42986229_1	chr4	-	942	7	ISM	ENSMUSG00000028452.8	ENST00000417448.2	3305	17	13773	3022	13773	-3022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGATCCTGACAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	42986229	42983041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145
ENSMUSG00000028452.8_42983057_42986035_1	chr4	-	811	6	ISM	ENSMUSG00000028452.8	ENST00000417448.2	3305	17	13967	3037	13967	-3037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGACCGAGTCATCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	42986035	42983056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931
ENSMUSG00000028452.8_42983457_42986279_1	chr4	-	791	6	ISM	ENSMUSG00000028452.8	ENST00000417448.2	3305	17	13723	3437	13723	-3437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	740	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGGCCAACTTCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	42986279	42983456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145
ENSMUSG00000028452.8_42984366_42990802_1	chr4	-	769	7	ISM	ENSMUSG00000028452.8	ENST00000417448.2	3305	17	9200	4346	9200	-4346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTGGGAAGATATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	42990802	42984365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745
ENSMUSG00000028452.8_42984626_42993218_1	chr4	-	758	7	ISM	ENSMUSG00000028452.8	ENST00000417448.2	3305	17	6784	4606	6784	-4606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATCCGGAAAAAAATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	42993218	42984625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148
ENSMUSG00000028452.8_42986023_42995947_1	chr4	-	740	7	ISM	ENSMUSG00000028452.8	ENST00000417448.2	3305	17	4055	6003	4055	-6003	internal_fragment	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGGATGGCCTAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	42995947	42986022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895
ENSMUSG00000028452.8_42986242_42996068_1	chr4	-	720	6	ISM	ENSMUSG00000028452.8	ENST00000417448.2	3305	17	3934	6222	3934	-6222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACCTTCGTAAAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	42996068	42986241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895
ENSMUSG00000028452.8_42990796_43000263_1	chr4	-	743	6	ISM	ENSMUSG00000028452.8	ENST00000679902.1	3396	16	124	10874	124	-10776	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTGCCACTGAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	43000263	42990795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ENSMUSG00000028452.8_42993198_43000433_1	chr4	-	782	5	ISM	ENSMUSG00000028452.8	ENST00000679647.1	2893	16	21	13222	21	-13178	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCCAGACACAGTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	43000433	42993197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ENSMUSG00000028452.8_42993263_43000454_1	chr4	-	738	5	ISM	ENSMUSG00000028452.8	ENST00000679647.1	2893	16	0	13287	0	-13243	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGTGGGATGCGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	43000454	42993262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ENSMUSG00000028454.17_43017635_43019706_1	chr4	-	759	4	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	5371	-19	5371	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTAAGATCTGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	43019706	43017634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646
ENSMUSG00000028454.17_43019298_43022054_1	chr4	-	665	5	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	3023	1644	3023	-1644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCGCCTCCGGGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	43022054	43019297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43019436_43019646_43019854_43020266_43020319_43021569_43021795_43022011
ENSMUSG00000028454.17_43019337_43022116_1	chr4	-	688	5	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	2961	1683	2961	-1683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCTGAGGAAGAGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	43022116	43019336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43019436_43019646_43019854_43020266_43020319_43021569_43021795_43022011
ENSMUSG00000028454.17_43019402_43022152_1	chr4	-	659	5	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	2925	1748	2925	-1748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGCGTCAAGGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	43022152	43019401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43019436_43019646_43019854_43020266_43020319_43021569_43021795_43022011
ENSMUSG00000028454.17_43019720_43022672_1	chr4	-	660	5	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	2405	2066	2405	-2066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTCTTCTACCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	43022672	43019719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43019854_43020266_43020319_43021569_43021795_43022011_43022195_43022606
ENSMUSG00000028454.17_43019776_43022719_1	chr4	-	651	5	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	2358	2122	2358	-2122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTCTTTTCAGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	43022719	43019775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43019854_43020266_43020319_43021569_43021795_43022011_43022195_43022606
ENSMUSG00000028454.17_43019841_43022756_1	chr4	-	623	5	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	2321	2187	2321	-2187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCAGGCAGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	43022756	43019840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43019854_43020266_43020319_43021569_43021795_43022011_43022195_43022606
ENSMUSG00000028454.17_43020266_43023493_1	chr4	-	745	5	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	1584	2612	1584	-2612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGCAGACCTGAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	43023493	43020265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43020319_43021569_43021795_43022011_43022195_43022606_43022767_43023369
ENSMUSG00000028454.17_43021696_43023788_1	chr4	-	683	5	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	1289	4042	1289	-4042	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGCACTTTCTGCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	43023788	43021695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671
ENSMUSG00000028454.17_43021741_43024596_1	chr4	-	699	6	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	481	4087	481	-4087	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTCATCGGCTGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	43024596	43021740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562
ENSMUSG00000028454.17_43022010_43024676_1	chr4	-	727	5	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	401	4356	401	-4356	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAGAGGACTAGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	43024676	43022009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562
ENSMUSG00000028454.17_43022650_43024829_1	chr4	-	652	4	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	248	4996	248	-4996	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTACAGCCCCACAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	43024829	43022649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43022767_43023369_43023494_43023671_43023816_43024562
ENSMUSG00000028454.17_43023405_43025080_1	chr4	-	751	3	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	-3	5751	-3	-5751	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAGAAACTTAGCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	43025080	43023404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43023494_43023671_43023816_43024562
ENSMUSG00000028455.16_43028026_43031384_1	chr4	-	1077	9	FSM	ENSMUSG00000028455.16	ENST00000452248.6	1196	9	72	47	72	-47	multi-exon	FALSE	canonical	NA	NA	NA	NA	2752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAACTGTCCTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	43031384	43028025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ENSMUSG00000028455.16_43028026_43031384_2	chr4	-	1072	9	NNC	ENSMUSG00000028455.16	novel	1196	9	NA	NA	72	-47	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAACTGTCCTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	43031384	43028025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43030048_43030146_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ENSMUSG00000028455.16_43028042_43031436_1	chr4	-	1108	9	NNC	ENSMUSG00000028455.16	novel	1196	9	NA	NA	20	-63	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2730	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGACCAGTGGCAAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	43031436	43028041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43030048_43030146_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ENSMUSG00000028455.16_43028042_43031436_2	chr4	-	1113	9	FSM	ENSMUSG00000028455.16	ENST00000452248.6	1196	9	20	63	20	-63	multi-exon	FALSE	canonical	NA	NA	NA	NA	2803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGACCAGTGGCAAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	43031436	43028041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ENSMUSG00000028455.16_43029597_43030150_1	chr4	-	278	3	ISM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	1560	1907	1306	-1618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAGGGACACGAGAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	43030150	43029596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43029638_43029769_43029905_43030048
ENSMUSG00000028461.13_43493417_43495580_1	chr4	+	496	5	FSM	ENSMUSG00000028461.13	ENSMUST00000107922.3	865	5	28	341	28	-341	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCCAGCCTGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	43493416	43495580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508
ENSMUSG00000028461.13_43493605_43495745_1	chr4	+	469	5	ISM	ENSMUSG00000028461.13	ENSMUST00000030181.12	817	6	243	176	216	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACAGTCAGGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	43493604	43495745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_43493760_43495194_43495256_43495341_43495433_43495508_43495622_43495696
ENSMUSG00000028461.13_43495192_43495921_1	chr4	+	493	4	ISM	ENSMUSG00000028461.13	ENSMUST00000030181.12	817	6	1830	0	1803	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTCCTCTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	43495191	43495921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_43495256_43495341_43495433_43495508_43495622_43495696
ENSMUSG00000028464.17_43514711_43523388_1	chr4	-	2091	9	NNC	ENSMUSG00000028464.17	novel	2098	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	946	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGGCCCTTTAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	43523388	43514710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_43516004_43518229_43518300_43518401_43518465_43518643_43518720_43519226_43519290_43519388_43519507_43519610_43519745_43522674_43522801_43523240
ENSMUSG00000028464.17_43514711_43523388_2	chr4	-	2093	9	NNC	ENSMUSG00000028464.17	novel	2098	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1068	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGGCCCTTTAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	43523388	43514710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_43516004_43518229_43518294_43518401_43518465_43518643_43518720_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522801_43523240
ENSMUSG00000028464.17_43514711_43523388_3	chr4	-	2097	9	NNC	ENSMUSG00000028464.17	novel	2098	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGGCCCTTTAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	43523388	43514710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_43516004_43518229_43518300_43518401_43518465_43518643_43518720_43519226_43519290_43519382_43519507_43519610_43519745_43522674_43522801_43523240
ENSMUSG00000028464.17_43514711_43523388_4	chr4	-	2093	9	NNC	ENSMUSG00000028464.17	novel	2098	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGGCCCTTTAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	43523388	43514710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_43516004_43518229_43518300_43518401_43518465_43518643_43518720_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522795_43523240
ENSMUSG00000028464.17_43514711_43523388_5	chr4	-	2092	9	NNC	ENSMUSG00000028464.17	novel	2098	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGGCCCTTTAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	43523388	43514710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_43516004_43518229_43518300_43518401_43518465_43518643_43518720_43519226_43519298_43519388_43519507_43519610_43519738_43522674_43522801_43523240
ENSMUSG00000028464.17_43514711_43523388_6	chr4	-	2093	9	NNC	ENSMUSG00000028464.17	novel	2098	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGGCCCTTTAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	43523388	43514710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_43515998_43518229_43518300_43518401_43518465_43518643_43518720_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522801_43523240
ENSMUSG00000028464.17_43514840_43522724_1	chr4	-	604	8	ISM	ENSMUSG00000028464.17	ENSMUST00000107914.10	1164	9	871	129	664	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAACGTGGAGATACACC	NA	NA	NA	NA	NA	NA	NA	NA	43522724	43514839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43514862_43518229_43518300_43518401_43518465_43519002_43519079_43519226_43519298_43519388_43519507_43519610_43519745_43522674
ENSMUSG00000028464.17_43518230_43522800_1	chr4	-	658	7	ISM	ENSMUSG00000028464.17	ENSMUST00000030184.12	2175	9	664	3519	588	-3515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAAGGACTCCCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	43522800	43518229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43518300_43518401_43518465_43519002_43519079_43519226_43519298_43519388_43519507_43519610_43519745_43522674
ENSMUSG00000028464.17_43519668_43523595_1	chr4	-	558	3	ISM	ENSMUSG00000028464.17	ENSMUST00000107914.10	1164	9	0	4957	0	-4953	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTACAGCCTTGCAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	43523595	43519667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43519745_43522674_43522801_43523240
ENSMUSG00000028465.17_43531794_43540040_1	chr4	-	3225	23	ISM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	22382	275	22382	-275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCCCAAGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	43540040	43531793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975
ENSMUSG00000028465.17_43531988_43540617_1	chr4	-	3216	24	ISM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	21805	469	21805	-469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCAGAGCTTCGAGACG	NA	NA	NA	NA	NA	NA	NA	NA	43540617	43531987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529
ENSMUSG00000028465.17_43534596_43544417_1	chr4	-	3221	23	ISM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	18005	3077	18005	-3077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCGGGCTTGCAAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	43544417	43534595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279
ENSMUSG00000028465.17_43535954_43545218_1	chr4	-	3235	23	ISM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	17204	4435	17204	-4435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGCTACCCAACATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	43545218	43535953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093
ENSMUSG00000028465.17_43537805_43546874_1	chr4	-	3216	24	ISM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	15548	6286	15548	-6286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCTGAAAATGAAGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	43546874	43537804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749
ENSMUSG00000028465.17_43539712_43550027_1	chr4	-	3210	23	ISM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	12395	8193	12395	-8193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGTGGATAACCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	43550027	43539711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937
ENSMUSG00000028465.17_43542905_43553532_1	chr4	-	3222	23	ISM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	8890	11386	8890	-11386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTGACAATGCACTTCG	NA	NA	NA	NA	NA	NA	NA	NA	43553532	43542904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445
ENSMUSG00000028466.16_43562332_43567060_1	chr4	+	1878	9	NNC	ENSMUSG00000028466.16	novel	1884	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTTTTTACTGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	43562331	43567060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566199_43566293_43566379_43566468
ENSMUSG00000028466.16_43562332_43567060_2	chr4	+	1878	9	NNC	ENSMUSG00000028466.16	novel	1884	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTTTTTACTGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	43562331	43567060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565266_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
ENSMUSG00000028466.16_43562470_43567061_1	chr4	+	1747	9	FSM	ENSMUSG00000028466.16	ENSMUST00000102944.11	1884	9	138	-1	138	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTTTTTACTGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	43562469	43567061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
ENSMUSG00000028466.16_43562470_43567061_2	chr4	+	1741	9	NNC	ENSMUSG00000028466.16	novel	1884	9	NA	NA	138	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTTTTTACTGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	43562469	43567061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565266_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
ENSMUSG00000028467.16_43567315_43578636_1	chr4	-	2920	17	FSM	ENSMUSG00000028467.16	ENSMUST00000030189.14	3544	17	237	387	237	-383	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGGCCCTGCAACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	43578636	43567314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569662_43569829_43569956_43570036_43570191_43570345_43570449_43570671_43570912_43571188_43571408_43573750_43573867_43574027_43574120_43578015
ENSMUSG00000028467.16_43567424_43568149_1	chr4	-	643	2	FSM	ENSMUSG00000028467.16	ENST00000378088.1	1533	2	398	492	398	-492	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTATGGGAACGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	43568149	43567423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_43567917_43567999
ENSMUSG00000028467.16_43567576_43568266_1	chr4	-	608	2	FSM	ENSMUSG00000028467.16	ENST00000378088.1	1533	2	281	644	281	-644	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTAAGTTCTTGCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	43568266	43567575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_43567917_43567999
ENSMUSG00000028467.16_43567734_43568463_1	chr4	-	647	2	FSM	ENSMUSG00000028467.16	ENST00000378088.1	1533	2	84	802	84	-802	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAAGAGGTAATGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	43568463	43567733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_43567917_43567999
ENSMUSG00000028470.11_43654228_43656466_1	chr4	-	604	5	NNC	ENSMUSG00000028470.11	novel	610	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATCCCTGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	43656466	43654227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_43654412_43654512_43654579_43654715_43654821_43654905_43655047_43656358
ENSMUSG00000028470.11_43654228_43656466_2	chr4	-	604	5	NNC	ENSMUSG00000028470.11	novel	610	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATCCCTGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	43656466	43654227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_43654412_43654512_43654586_43654715_43654821_43654905_43655040_43656358
ENSMUSG00000028475.10_43730673_43732084_1	chr4	+	512	2	NNC	ENSMUSG00000028475.10	novel	535	2	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTCACGGAATAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	43730672	43732084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_43730721_43731620
ENSMUSG00000028475.10_43730673_43732084_2	chr4	+	527	2	NNC	ENSMUSG00000028475.10	novel	535	2	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTCACGGAATAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	43730672	43732084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_43730737_43731621
ENSMUSG00000028475.10_43730673_43732084_3	chr4	+	526	2	NNC	ENSMUSG00000028475.10	novel	535	2	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTCACGGAATAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	43730672	43732084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_43730753_43731638
ENSMUSG00000028475.10_43730673_43732084_4	chr4	+	537	2	NNC	ENSMUSG00000028475.10	novel	535	2	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTCACGGAATAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	43730672	43732084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_43730746_43731620
ENSMUSG00000028475.10_43730673_43732084_5	chr4	+	527	2	FSM	ENSMUSG00000028475.10	ENST00000636776.1	535	2	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTCACGGAATAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	43730672	43732084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_43730736_43731620
ENSMUSG00000028475.10_43730673_43732084_6	chr4	+	521	2	NNC	ENSMUSG00000028475.10	novel	535	2	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTCACGGAATAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	43730672	43732084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_43730748_43731638
ENSMUSG00000028478.19_44004452_44012538_1	chr4	+	526	2	ISM	ENSMUSG00000028478.19	ENSMUST00000107846.10	1710	6	0	20308	0	-20044	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCACGAGTTGTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	44004451	44012538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44004701_44012261
ENSMUSG00000028478.19_44004552_44012584_1	chr4	+	472	2	ISM	ENSMUSG00000028478.19	ENSMUST00000107846.10	1710	6	100	20262	100	-19998	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGCTCCCGTCTTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	44004551	44012584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44004701_44012261
ENSMUSG00000028478.19_44004603_44012636_1	chr4	+	473	2	ISM	ENSMUSG00000028478.19	ENSMUST00000107846.10	1710	6	151	20210	151	-19946	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATATAGAAGCAGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	44004602	44012636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44004701_44012261
ENSMUSG00000028478.19_44012638_44032846_1	chr4	+	924	3	NNC	ENSMUSG00000028478.19	novel	1121	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	44012637	44032846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_44013009_44025448_44025561_44032405
ENSMUSG00000028478.19_44012638_44032846_2	chr4	+	929	3	FSM	ENSMUSG00000028478.19	ENST00000540080.5	918	3	-12	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	44012637	44032846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_44013009_44025448_44025561_44032400
ENSMUSG00000028478.19_44012638_44032846_3	chr4	+	1071	4	NNC	ENSMUSG00000028478.19	novel	1121	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	44012637	44032846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_44013009_44019849_44019992_44025448_44025561_44032400
ENSMUSG00000028478.19_44012686_44032582_1	chr4	+	707	5	FSM	ENSMUSG00000028478.19	ENST00000466396.5	676	5	-31	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGAAACACTACGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	44012685	44032582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_44013009_44025448_44025561_44030214_44030269_44031399_44031436_44032400
ENSMUSG00000028478.19_44012686_44032582_2	chr4	+	702	5	NNC	ENSMUSG00000028478.19	novel	676	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGAAACACTACGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	44012685	44032582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_44013009_44025448_44025561_44030214_44030269_44031399_44031436_44032405
ENSMUSG00000028478.19_44012805_44032846_1	chr4	+	904	4	NNC	ENSMUSG00000028478.19	novel	1710	6	NA	NA	88	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	44012804	44032846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_44013009_44019849_44019992_44025448_44025561_44032400
ENSMUSG00000028478.19_44012805_44032846_2	chr4	+	918	5	FSM	ENSMUSG00000028478.19	ENSMUST00000170241.8	1079	5	162	-1	88	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	44012804	44032846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
ENSMUSG00000028478.19_44012869_44032846_1	chr4	+	854	5	FSM	ENSMUSG00000028478.19	ENSMUST00000170241.8	1079	5	226	-1	152	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	44012868	44032846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
ENSMUSG00000028479.19_44036826_44042292_1	chr4	-	1180	5	ISM	ENSMUSG00000028479.19	ENST00000539208.5	1876	9	17936	-269	17936	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATATCTGGTCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	44042292	44036825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162
ENSMUSG00000028479.19_44040300_44055331_1	chr4	-	1128	7	ISM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	17447	3474	4897	-3205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGGAATGGCCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	44055331	44040299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204
ENSMUSG00000028479.19_44041662_44059851_1	chr4	-	1094	7	ISM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	12927	4836	377	-4567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTGGGAAGAAGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	44059851	44041661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775
ENSMUSG00000028479.19_44041699_44059935_1	chr4	-	1141	7	ISM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	12843	4873	293	-4604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGAGAACTTCGTGACG	NA	NA	NA	NA	NA	NA	NA	NA	44059935	44041698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775
ENSMUSG00000028479.19_44041758_44059984_1	chr4	-	1131	7	ISM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	12794	4932	244	-4663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGACAATGACGGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	44059984	44041757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775
ENSMUSG00000028479.19_44045955_44059820_1	chr4	-	294	3	ISM	ENSMUSG00000028479.19	ENST00000539208.5	1876	9	408	8860	408	-8860	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATAAAATATTGCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	44059820	44045954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_44045991_44052770_44052984_44059775
ENSMUSG00000028479.19_44052875_44059978_1	chr4	-	312	2	ISM	ENSMUSG00000028479.19	ENST00000539208.5	1876	9	250	15780	250	-15780	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGGCTGCATGATTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	44059978	44052874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_44052984_44059775
ENSMUSG00000028479.19_44052875_44072602_1	chr4	-	1161	5	ISM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	176	16049	176	-15780	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGGCTGCATGATTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	44072602	44052874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_44052984_44055204_44055358_44059775_44060228_44066754_44066961_44072361
ENSMUSG00000028480.15_43957401_43979118_1	chr4	+	2315	5	NNC	ENSMUSG00000028480.15	novel	2320	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCCTCTAATGCGATT	NA	NA	NA	NA	NA	NA	NA	NA	43957400	43979118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_43957774_43968111_43968221_43968571_43968676_43970504_43970578_43977462
ENSMUSG00000028483.14_83335981_83360206_1	chr4	+	812	6	FSM	ENSMUSG00000028483.14	ENSMUST00000071544.11	942	6	13	117	13	-117	multi-exon	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTAATTCTTCCCAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	83335980	83360206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123
ENSMUSG00000028483.14_83336135_83368380_1	chr4	+	725	7	NNC	ENSMUSG00000028483.14	novel	1405	9	NA	NA	167	-3197	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTAATGACTTGCATAT	NA	NA	NA	NA	NA	NA	NA	NA	83336134	83368380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_83336286_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307
ENSMUSG00000028483.14_83336148_83371577_1	chr4	+	1218	9	FSM	ENSMUSG00000028483.14	ENSMUST00000030206.10	1405	9	187	0	180	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGATTCTTTTCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	83336147	83371577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277
ENSMUSG00000028483.14_83353427_83375338_1	chr4	+	747	7	NNC	ENSMUSG00000028483.14	novel	1349	10	NA	NA	17459	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTCATTACAACTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	83353426	83375338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_83353533_83354567_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277_83371328_83375246
ENSMUSG00000028483.14_83354559_83375338_1	chr4	+	650	6	ISM	ENSMUSG00000028483.14	ENST00000610884.4	1349	10	18704	-4	18591	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTCATTACAACTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	83354558	83375338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277_83371328_83375246
ENSMUSG00000028484.17_83374788_83378232_1	chr4	-	793	3	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	26464	871	26458	-871	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTCTTTTATCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	83378232	83374787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_83375317_83376311_83376424_83378080
ENSMUSG00000028484.17_83378439_83392548_1	chr4	-	793	9	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	12148	4522	12142	1669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCAGCAAGCTCAGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	83392548	83378438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514
ENSMUSG00000028484.17_83380108_83385020_1	chr4	-	1024	4	ISM	ENSMUSG00000028484.17	ENSMUST00000107215.9	1898	11	19675	0	19670	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	83385020	83380107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_83380711_83381831_83381951_83383161_83383388_83384944
ENSMUSG00000028484.17_83380108_83392619_1	chr4	-	1366	7	ISM	ENSMUSG00000028484.17	ENSMUST00000107214.9	1973	11	12071	0	12071	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	83392619	83380107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_83380791_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514
ENSMUSG00000028484.17_83380414_83403993_1	chr4	-	1316	10	ISM	ENSMUSG00000028484.17	ENSMUST00000107214.9	1973	11	697	306	697	-306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAGCTTACAATGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	83403993	83380413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_83380791_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953
ENSMUSG00000028484.17_83380432_83394544_1	chr4	-	988	8	ISM	ENSMUSG00000028484.17	ENSMUST00000107215.9	1898	11	10151	324	10146	-324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTTTTCTTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	83394544	83380431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_83380711_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518
ENSMUSG00000028484.17_83380473_83404054_1	chr4	-	1318	10	ISM	ENSMUSG00000028484.17	ENSMUST00000107214.9	1973	11	636	365	636	-365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAGGTACACACTACATA	NA	NA	NA	NA	NA	NA	NA	NA	83404054	83380472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_83380791_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953
ENSMUSG00000028484.17_83380632_83404584_1	chr4	-	1343	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107214.9	1973	11	106	524	106	-524	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAAGTGGAGCATACAAG	NA	NA	NA	NA	NA	NA	NA	NA	83404584	83380631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_83380791_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ENSMUSG00000028484.17_83380712_83404690_1	chr4	-	1369	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107214.9	1973	11	0	604	0	-604	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAACAACATGTAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	83404690	83380711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_83380791_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ENSMUSG00000028492.14_86362878_86406111_1	chr4	-	1312	2	FSM	ENSMUSG00000028492.14	ENST00000380530.1	1360	2	46	2	46	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAAAGGAAAATGACACA	NA	NA	NA	NA	NA	NA	NA	NA	86406111	86362877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_86364055_86405976
ENSMUSG00000028494.13_86575595_86578367_1	chr4	-	225	3	ISM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	9930	793	9930	-793	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACTACATGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	86578367	86575594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86575642_86576817_86576953_86578324
ENSMUSG00000028494.13_86578358_86580258_1	chr4	-	237	2	ISM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	8039	3556	8039	-3556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTCTCAGCTCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	86580258	86578357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86578507_86580170
ENSMUSG00000028494.13_86580330_86586620_1	chr4	-	221	3	ISM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	1677	5528	1677	-5528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGACTGGCAGCGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	86586620	86580329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86580451_86582665_86582749_86586603
ENSMUSG00000028494.13_86580383_86586668_1	chr4	-	216	3	ISM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	1629	5581	1629	-5581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATTCTGTAGCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	86586668	86580382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86580451_86582665_86582749_86586603
ENSMUSG00000028494.13_86580424_86586728_1	chr4	-	235	3	ISM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	1569	5622	1569	-5622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGGCGAAGGATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	86586728	86580423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86580451_86582665_86582749_86586603
ENSMUSG00000028495.15_86773041_86774157_1	chr4	-	206	2	ISM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	1492	144	1492	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1696	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAAGGAAGCCAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86774157	86773040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86773193_86774103
ENSMUSG00000028495.15_86773041_86774204_2	chr4	-	253	2	ISM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	1445	144	1445	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3609	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAAGGAAGCCAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86774204	86773040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86773193_86774103
ENSMUSG00000028495.15_86773153_86774250_1	chr4	-	187	2	ISM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	1399	256	1399	-256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTACTCCTCGTGTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	86774250	86773152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86773193_86774103
ENSMUSG00000028495.15_86774099_86774437_1	chr4	-	207	2	ISM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	1212	1202	1212	-1202	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1045	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGGGGGGGGGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	86774437	86774098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86774251_86774382
ENSMUSG00000028495.15_86774099_86774437_2	chr4	-	204	2	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	1212	-1202	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGGGGGGGGGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	86774437	86774098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_86774248_86774382
ENSMUSG00000028495.15_86774099_86774499_1	chr4	-	269	2	ISM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	1150	1202	1150	-1202	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2870	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGGGGGGGGGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	86774499	86774098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86774251_86774382
ENSMUSG00000028495.15_86774211_86774548_1	chr4	-	203	2	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	1101	-1314	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTCGGTTGGGACCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86774548	86774210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_86774248_86774382
ENSMUSG00000028495.15_86774421_86774988_1	chr4	-	197	2	ISM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	661	1524	661	-1524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	996	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTCAGTGTTCTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	86774988	86774420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86774594_86774964
ENSMUSG00000028495.15_86774476_86775034_1	chr4	-	188	2	ISM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	615	1579	615	-1579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGAGAACTGGAGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	86775034	86774475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86774594_86774964
ENSMUSG00000028495.15_86774521_86775090_1	chr4	-	199	2	ISM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	559	1624	559	-1624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1091	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGAGTGCGCCTGCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	86775090	86774520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86774594_86774964
ENSMUSG00000028495.15_86774568_86775598_1	chr4	-	199	3	ISM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	51	1671	51	-1671	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2078	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGACAAGCAAGGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	86775598	86774567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86774594_86774964_86775097_86775557
ENSMUSG00000028495.15_86774964_86775649_1	chr4	-	225	2	ISM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	0	2067	0	-2067	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2063	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTTGTTACCGGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	86775649	86774963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86775097_86775557
ENSMUSG00000028496.18_87692030_87951050_1	chr4	-	2097	11	FSM	ENSMUSG00000028496.18	ENST00000630269.2	2024	11	-73	0	-73	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAGGAAGAATTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	87951050	87692029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_87692384_87700523_87700596_87701885_87701958_87707523_87707624_87710089_87710220_87712172_87712249_87758918_87759627_87792074_87792219_87798302_87798386_87949760_87949942_87950873
ENSMUSG00000028497.13_88332026_88337963_1	chr4	-	586	2	ISM	ENSMUSG00000028497.13	ENSMUST00000030221.3	2089	7	19200	859	19200	-859	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTCATGAAGCGCATC	NA	NA	NA	NA	NA	NA	NA	NA	88337963	88332025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_88332584_88337935
ENSMUSG00000028497.13_88332162_88341254_1	chr4	-	575	3	ISM	ENSMUSG00000028497.13	ENSMUST00000030221.3	2089	7	15909	995	15909	-995	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATTTATATGAAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	88341254	88332161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_88332584_88337935_88338062_88341227
ENSMUSG00000028497.13_88332287_88345007_1	chr4	-	565	4	ISM	ENSMUSG00000028497.13	ENSMUST00000030221.3	2089	7	12156	1120	12156	-1120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTACATTTATAATGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	88345007	88332286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_88332584_88337935_88338062_88341227_88341335_88344972
ENSMUSG00000028497.13_88332427_88353282_1	chr4	-	610	5	ISM	ENSMUSG00000028497.13	ENSMUST00000030221.3	2089	7	3881	1260	3881	-1260	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCGAAAAAAAAAAACATAGA	NA	NA	NA	NA	NA	NA	NA	NA	88353282	88332426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_88332584_88337935_88338062_88341227_88341335_88344972_88345086_88353175
ENSMUSG00000028497.13_88332556_88355751_1	chr4	-	557	6	ISM	ENSMUSG00000028497.13	ENSMUST00000030221.3	2089	7	1412	1389	1412	-1389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAGAAAGAAAAGACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	88355751	88332555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_88332584_88337935_88338062_88341227_88341335_88344972_88345086_88353175_88353304_88355696
ENSMUSG00000028514.16_106267375_106269446_1	chr4	+	600	4	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	93944	29073	40	0	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATGAACAGAGAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	106267374	106269446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_106267550_106267980_106268106_106268496_106268639_106269288
ENSMUSG00000028514.16_106267463_106269446_1	chr4	+	512	4	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	94032	29073	128	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATGAACAGAGAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	106267462	106269446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_106267550_106267980_106268106_106268496_106268639_106269288
ENSMUSG00000028517.9_105014679_105052065_1	chr4	+	548	2	ISM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	135	37896	135	-37896	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACGAGAGCATCAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	105014678	105052065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_105015161_105051999
ENSMUSG00000028517.9_105014834_105065828_1	chr4	+	593	3	ISM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	290	24133	290	-24133	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGCTGTGCCATTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	105014833	105065828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_105015161_105051999_105052158_105065720
ENSMUSG00000028517.9_105015060_105066431_1	chr4	+	575	4	ISM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	516	23530	516	-23530	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCACTATGCTGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	105015059	105066431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396
ENSMUSG00000028517.9_105052102_105076701_1	chr4	+	572	4	ISM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	37558	13260	37558	-13260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTAGCCCTTTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	105052101	105076701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_105052158_105065720_105066002_105066396_105066455_105076524
ENSMUSG00000028517.9_105065768_105088173_1	chr4	+	549	4	ISM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	51224	1788	51224	-1788	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCGTGGACATCATCGACA	NA	NA	NA	NA	NA	NA	NA	NA	105065767	105088173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_105066002_105066396_105066455_105076524_105076702_105088093
ENSMUSG00000028517.9_105065853_105088270_1	chr4	+	561	4	ISM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	51309	1691	51309	-1691	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCCGATCTCATCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	105065852	105088270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_105066002_105066396_105066455_105076524_105076702_105088093
ENSMUSG00000028517.9_105076620_105088555_1	chr4	+	544	2	ISM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	62076	1406	62076	-1406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTCTTATGTAGCACACA	NA	NA	NA	NA	NA	NA	NA	NA	105076619	105088555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_105076702_105088093
ENSMUSG00000028518.9_104891228_104893366_1	chr4	-	1302	2	ISM	ENSMUSG00000028518.9	ENST00000371244.9	2995	10	73736	5	73721	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAACATTTTAAGACATA	NA	NA	NA	NA	NA	NA	NA	NA	104893366	104891227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_104891907_104892743
ENSMUSG00000028518.9_104891266_104893431_1	chr4	-	1329	2	ISM	ENSMUSG00000028518.9	ENST00000371244.9	2995	10	73671	43	73656	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGAATTTCAGGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	104893431	104891265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_104891907_104892743
ENSMUSG00000028518.9_104891412_104893936_1	chr4	-	1320	3	ISM	ENSMUSG00000028518.9	ENST00000371244.9	2995	10	73166	189	73151	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAAGGAGGCAGAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	104893936	104891411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_104891907_104892743_104893528_104893895
ENSMUSG00000028518.9_104891473_104893984_1	chr4	-	1307	3	ISM	ENSMUSG00000028518.9	ENST00000371244.9	2995	10	73118	250	73103	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTAAGGAACTGAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	104893984	104891472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_104891907_104892743_104893528_104893895
ENSMUSG00000028518.9_104891550_104894024_1	chr4	-	1270	3	ISM	ENSMUSG00000028518.9	ENST00000371244.9	2995	10	73078	327	73063	-327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTATCCTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	104894024	104891549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_104891907_104892743_104893528_104893895
ENSMUSG00000028518.9_104891711_104897123_1	chr4	-	1312	4	ISM	ENSMUSG00000028518.9	ENST00000371244.9	2995	10	69979	488	69964	-488	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGTGTATAATTTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	104897123	104891710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_104891907_104892743_104893528_104893895_104894023_104896918
ENSMUSG00000028518.9_104891789_104897205_1	chr4	-	1316	4	ISM	ENSMUSG00000028518.9	ENST00000371244.9	2995	10	69897	566	69882	-566	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGATGGTCAATA	NA	NA	NA	NA	NA	NA	NA	NA	104897205	104891788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_104891907_104892743_104893528_104893895_104894023_104896918
ENSMUSG00000028518.9_104891837_104897270_1	chr4	-	1333	4	ISM	ENSMUSG00000028518.9	ENST00000371244.9	2995	10	69832	614	69817	-614	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATCAGGAATTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	104897270	104891836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_104891907_104892743_104893528_104893895_104894023_104896918
ENSMUSG00000028518.9_104892744_104897423_1	chr4	-	1416	3	ISM	ENSMUSG00000028518.9	ENST00000371244.9	2995	10	69679	1521	69664	-1521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAGCCATTAAGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	104897423	104892743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_104893528_104893895_104894023_104896918
ENSMUSG00000028518.9_104893017_104904483_1	chr4	-	1339	4	ISM	ENSMUSG00000028518.9	ENST00000371244.9	2995	10	62619	1794	62604	-1794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGTAGATGGCAAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	104904483	104893016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287
ENSMUSG00000028518.9_104893227_104908543_1	chr4	-	1391	6	ISM	ENSMUSG00000028518.9	ENST00000371244.9	2995	10	58559	2004	58544	-2004	internal_fragment	TRUE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATCTCACTCGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	104908543	104893226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398
ENSMUSG00000028518.9_104893479_104932689_1	chr4	-	1312	8	ISM	ENSMUSG00000028518.9	ENST00000371244.9	2995	10	34413	2256	34398	-2256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTGCGGGCCTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	104932689	104893478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610
ENSMUSG00000028518.9_104893965_104966957_1	chr4	-	1313	8	ISM	ENSMUSG00000028518.9	ENST00000371244.9	2995	10	145	2742	130	-2742	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGAGCTTACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	104966957	104893964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
ENSMUSG00000028518.9_104896915_104967087_1	chr4	-	1389	7	ISM	ENSMUSG00000028518.9	ENST00000371244.9	2995	10	15	5692	0	-5692	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCACGGCGCACTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	104967087	104896914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
ENSMUSG00000028519.17_104336388_104589363_1	chr4	+	1781	15	NNC	ENSMUSG00000028519.17	novel	1802	15	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCGCAGGTCTGGGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	104336387	104589363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266_104537306_104538794_104538861_104545579_104545640_104570818_104570870_104570965_104571009_104575406_104575470_104577718_104577828_104584756_104585306_104588821_104588950_104589266
ENSMUSG00000028519.17_104336388_104589363_2	chr4	+	1786	15	FSM	ENSMUSG00000028519.17	ENST00000371231.5	1802	15	17	-1	17	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCGCAGGTCTGGGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	104336387	104589363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266_104537306_104538794_104538861_104545579_104545640_104570818_104570870_104570960_104571009_104575406_104575470_104577718_104577828_104584756_104585306_104588821_104588950_104589266
ENSMUSG00000028524.22_102617722_102727794_1	chr4	+	397	5	ISM	ENSMUSG00000028524.22	ENST00000424320.6	1384	12	137	58455	0	-58455	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTCGCACAAGAAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	102617721	102727794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_102617763_102709966_102710162_102724836_102724894_102726950_102727006_102727745
ENSMUSG00000028524.22_102617722_102727867_1	chr4	+	470	5	ISM	ENSMUSG00000028524.22	ENST00000424320.6	1384	12	137	58382	0	-58382	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGATGAGCTGAAGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	102617721	102727867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_102617763_102709966_102710162_102724836_102724894_102726950_102727006_102727745
ENSMUSG00000028524.22_102709965_102766031_1	chr4	+	512	5	ISM	ENSMUSG00000028524.22	ENST00000424320.6	1384	12	92380	20218	92243	-20218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATATCTTAGCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	102709964	102766031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_102710162_102724836_102724894_102726950_102727006_102727745_102727922_102766004
ENSMUSG00000028524.22_102710136_102768683_1	chr4	+	419	7	ISM	ENSMUSG00000028524.22	ENST00000424320.6	1384	12	92551	17566	92414	-17566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTCCCCTCTTTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	102710135	102768683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_102710162_102724836_102724894_102726950_102727006_102727745_102727922_102766004_102766030_102766934_102766987_102768655
ENSMUSG00000028524.22_102710141_102768722_1	chr4	+	444	6	NNC	ENSMUSG00000028524.22	novel	1384	12	NA	NA	92419	-17527	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAGCAGAAGACGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	102710140	102768722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_102710162_102724836_102724894_102726950_102727006_102727745_102727938_102766934_102766987_102768655
ENSMUSG00000028524.22_102726951_102772348_1	chr4	+	487	6	ISM	ENSMUSG00000028524.22	ENST00000424320.6	1384	12	109366	13901	109229	-13901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTAATGTATCTACTC	NA	NA	NA	NA	NA	NA	NA	NA	102726950	102772348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_102727006_102727745_102727922_102766004_102766030_102766934_102766987_102768655_102768742_102772255
ENSMUSG00000028524.22_102727761_102776052_1	chr4	+	492	6	ISM	ENSMUSG00000028524.22	ENST00000424320.6	1384	12	110176	10197	110039	-10197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACTAGAATCTTTACGG	NA	NA	NA	NA	NA	NA	NA	NA	102727760	102776052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_102727922_102766004_102766030_102766934_102766987_102768655_102768742_102772255_102772349_102775977
ENSMUSG00000028524.22_102727873_102784693_1	chr4	+	416	7	ISM	ENSMUSG00000028524.22	ENST00000424320.6	1384	12	110288	1556	110151	-1556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGCAGCACCACTCCG	NA	NA	NA	NA	NA	NA	NA	NA	102727872	102784693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_102727922_102766004_102766030_102766934_102766987_102768655_102768742_102772255_102772349_102775977_102776053_102784657
ENSMUSG00000028524.22_102727874_102784707_1	chr4	+	420	6	NNC	ENSMUSG00000028524.22	novel	1384	12	NA	NA	110152	-1542	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGCCTCCACCTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	102727873	102784707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_102727938_102766934_102766987_102768655_102768742_102772255_102772349_102775977_102776053_102784657
ENSMUSG00000028524.22_102766970_102786001_1	chr4	+	415	6	ISM	ENSMUSG00000028524.22	ENST00000424320.6	1384	12	149385	248	149248	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATACACTCCTCCAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	102766969	102786001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_102766987_102768655_102768742_102772255_102772349_102775977_102776053_102784657_102784783_102785982
ENSMUSG00000028524.22_102775978_102786249_1	chr4	+	467	3	ISM	ENSMUSG00000028524.22	ENST00000424320.6	1384	12	158393	0	158256	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGAGAGCACCTTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	102775977	102786249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_102776053_102784657_102784783_102785982
ENSMUSG00000028524.22_102784655_102786249_1	chr4	+	390	2	NNC	ENSMUSG00000028524.22	novel	1384	12	NA	NA	166933	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGAGAGCACCTTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	102784654	102786249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_102784783_102785987
ENSMUSG00000028530.15_101010090_101013653_1	chr4	-	991	4	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	108826	526	108826	-526	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGAACAGCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	101013653	101010089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589
ENSMUSG00000028530.15_101010402_101015034_1	chr4	-	997	6	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	107445	838	107445	-838	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATCAGCTGCATAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	101015034	101010401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950
ENSMUSG00000028530.15_101010699_101016329_1	chr4	-	1022	8	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	106150	1135	106150	-1135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAGAAGCATGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	101016329	101010698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211
ENSMUSG00000028530.15_101012235_101017380_1	chr4	-	985	7	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	105099	2671	105099	-2671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGATTTTAGTCCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	101017380	101012234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228
ENSMUSG00000028530.15_101015001_101021755_1	chr4	-	994	8	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	100724	5437	100724	-5437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTACCATGAGAACATTG	NA	NA	NA	NA	NA	NA	NA	NA	101021755	101015000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654
ENSMUSG00000028530.15_101016262_101028550_1	chr4	-	975	8	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	93929	6698	93929	-6698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTCTTCCGAGCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	101028550	101016261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431
ENSMUSG00000028530.15_101017293_101031375_1	chr4	-	971	8	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	91104	7729	91104	-7729	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACGCTCTGGGAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	101031375	101017292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282
ENSMUSG00000028530.15_101019037_101032387_1	chr4	-	998	8	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	90092	9473	90092	-9473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCATCCCAGTCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	101032387	101019036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270
ENSMUSG00000028530.15_101021732_101036770_1	chr4	-	951	7	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	85709	12168	85709	-12168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGGAATTGCTGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	101036770	101021731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651
ENSMUSG00000028530.15_101028524_101039056_1	chr4	-	986	6	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	83423	18960	83423	-18960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGACCTCATGAACCACC	NA	NA	NA	NA	NA	NA	NA	NA	101039056	101028523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976
ENSMUSG00000028530.15_101031353_101041601_1	chr4	-	973	6	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	80878	21789	80878	-21789	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCTGAGGTGGAGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	101041601	101031352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533
ENSMUSG00000028530.15_101032356_101046339_1	chr4	-	984	6	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	76140	22792	76140	-22792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGCCCACCATTACCTC	NA	NA	NA	NA	NA	NA	NA	NA	101046339	101032355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275
ENSMUSG00000028530.15_101034771_101048726_1	chr4	-	1020	6	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	73753	25207	73753	-25207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGTAAGCTCGCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	101048726	101034770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671
ENSMUSG00000028530.15_101034902_101048827_1	chr4	-	990	6	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	73652	25338	73652	-25338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATAAACACAAGAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	101048827	101034901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671
ENSMUSG00000028530.15_101036788_101122323_1	chr4	-	1011	7	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	156	27224	156	-27224	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGAGACTTCTATGC	NA	NA	NA	NA	NA	NA	NA	NA	101122323	101036787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
ENSMUSG00000028530.15_101036903_101122423_1	chr4	-	996	7	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	56	27339	56	-27339	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTTGAAGGAATTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	101122423	101036902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
ENSMUSG00000028533.11_92032888_92035111_2	chr4	-	559	6	NNC	ENSMUSG00000028533.11	novel	672	6	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAGATGATGGTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92035111	92032887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_92032988_92033217_92033309_92033843_92033919_92034533_92034624_92034768_92034844_92034983
ENSMUSG00000028533.11_92032888_92035111_3	chr4	-	565	6	FSM	ENSMUSG00000028533.11	ENST00000604921.5	672	6	107	0	107	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAGATGATGGTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92035111	92032887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_92032988_92033217_92033309_92033837_92033919_92034533_92034624_92034768_92034844_92034983
ENSMUSG00000028533.11_92032888_92035180_1	chr4	-	629	6	NNC	ENSMUSG00000028533.11	novel	672	6	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAGATGATGGTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92035180	92032887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_92032988_92033217_92033309_92033837_92033919_92034533_92034624_92034768_92034844_92034988
ENSMUSG00000028533.11_92032888_92035180_2	chr4	-	629	6	NNC	ENSMUSG00000028533.11	novel	672	6	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAGATGATGGTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92035180	92032887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_92032988_92033217_92033304_92033837_92033919_92034533_92034624_92034768_92034844_92034983
ENSMUSG00000028533.11_92032888_92035180_3	chr4	-	632	6	NNC	ENSMUSG00000028533.11	novel	672	6	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAGATGATGGTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92035180	92032887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_92032988_92033217_92033309_92033837_92033919_92034535_92034624_92034768_92034844_92034983
ENSMUSG00000028538.13_117789355_117964891_1	chr4	-	1751	9	FSM	ENSMUSG00000028538.13	ENST00000353126.8	1737	9	0	-14	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCCTCCTGTTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	117964891	117789354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_117790334_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745
ENSMUSG00000028538.13_117789852_117889079_1	chr4	-	1222	8	ISM	ENSMUSG00000028538.13	ENST00000647237.1	1678	10	75812	262	75781	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAAGAGGCCCACTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	117889079	117789851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117790334_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117879960_117880123_117889036
ENSMUSG00000028538.13_117790007_117964770_1	chr4	-	1140	10	FSM	ENSMUSG00000028538.13	ENST00000647237.1	1678	10	121	417	90	237	multi-exon	FALSE	canonical	NA	NA	NA	NA	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGCAGGAGGTGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	117964770	117790006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_117790334_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117879960_117880123_117889036_117889080_117911846_117911895_117964745
ENSMUSG00000028538.13_117790049_117964829_1	chr4	-	1157	10	FSM	ENSMUSG00000028538.13	ENST00000647237.1	1678	10	62	459	31	195	multi-exon	FALSE	canonical	NA	NA	NA	NA	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGAGGGCCAGGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	117964829	117790048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_117790334_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117879960_117880123_117889036_117889080_117911846_117911895_117964745
ENSMUSG00000028538.13_117790110_117964870_1	chr4	-	1137	10	FSM	ENSMUSG00000028538.13	ENST00000647237.1	1678	10	21	520	-10	134	multi-exon	FALSE	canonical	NA	NA	NA	NA	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCCACTGCAGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	117964870	117790109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_117790334_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117879960_117880123_117889036_117889080_117911846_117911895_117964745
ENSMUSG00000028538.13_117790244_117821624_1	chr4	-	739	7	ISM	ENSMUSG00000028538.13	ENST00000372369.5	1035	11	143236	0	143236	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCCGGACACCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	117821624	117790243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117790334_117797206_117797354_117797550_117797608_117815624_117815812_117816271_117816368_117817194_117817259_117821526
ENSMUSG00000028538.13_117790244_117889079_1	chr4	-	575	6	ISM	ENSMUSG00000028538.13	ENST00000531993.6	690	7	75781	0	75781	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCCGGACACCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	117889079	117790243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117790334_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117889036
ENSMUSG00000028538.13_117790244_117964839_1	chr4	-	463	6	FSM	ENSMUSG00000028538.13	ENST00000372362.6	465	6	21	-19	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCCGGACACCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	117964839	117790243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_117790334_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745
ENSMUSG00000028538.13_117790244_117964839_2	chr4	-	575	7	FSM	ENSMUSG00000028538.13	ENST00000528371.5	596	7	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCCGGACACCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	117964839	117790243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_117790334_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745
ENSMUSG00000028538.13_117790244_117964839_3	chr4	-	320	4	FSM	ENSMUSG00000028538.13	ENST00000531816.1	341	4	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCCGGACACCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	117964839	117790243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_117790334_117871901_117871995_117889036_117889080_117964745
ENSMUSG00000028538.13_117797207_117871994_1	chr4	-	739	7	ISM	ENSMUSG00000028538.13	ENST00000372369.5	1035	11	92866	6963	92866	-6944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGACTGGGCAAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	117871994	117797206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117797354_117797550_117797608_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901
ENSMUSG00000028538.13_117797333_117889079_1	chr4	-	656	8	ISM	ENSMUSG00000028538.13	ENST00000372369.5	1035	11	75781	7089	75781	-7070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCAGTGACCATGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	117889079	117797332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117797354_117797550_117797608_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036
ENSMUSG00000028538.13_117815624_117964839_1	chr4	-	580	6	ISM	ENSMUSG00000028538.13	ENST00000531993.6	690	7	21	25380	21	-25361	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTCCGTACTACAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	117964839	117815623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117889036_117889080_117964745
ENSMUSG00000028539.15_117783360_117786610_1	chr4	-	1826	5	FSM	ENSMUSG00000028539.15	ENSMUST00000070816.9	2177	5	350	1	84	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTTTGTCAGATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	117786610	117783359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_117784266_117784357_117784497_117784820_117785340_117786215_117786450_117786582
ENSMUSG00000028540.7_117746104_117747035_1	chr4	-	854	2	ISM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	2194	264	2194	-264	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCTTTATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	117747035	117746103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117746874_117746951
ENSMUSG00000028540.7_117746612_117747657_1	chr4	-	882	3	ISM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	1572	772	1572	-772	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGCCTGTGCAGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	117747657	117746611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117746874_117746951_117747129_117747214
ENSMUSG00000028540.7_117746966_117748128_1	chr4	-	884	3	ISM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	1101	1126	1101	-1126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGCCCTGCAGGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	117748128	117746965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117747129_117747214_117747899_117748091
ENSMUSG00000028540.7_117747069_117748239_1	chr4	-	892	3	ISM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	990	1229	990	-1229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTCATTTCTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	117748239	117747068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117747129_117747214_117747899_117748091
ENSMUSG00000028540.7_117747288_117748581_1	chr4	-	905	3	ISM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	648	1448	648	-1448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTGCAACCCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	117748581	117747287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117747899_117748091_117748316_117748511
ENSMUSG00000028540.7_117747483_117749054_1	chr4	-	901	4	ISM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	175	1643	175	-1643	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACACTTGCGGAAACTGAC	NA	NA	NA	NA	NA	NA	NA	NA	117749054	117747482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117747899_117748091_117748316_117748511_117748625_117748906
ENSMUSG00000028540.7_117747552_117749183_1	chr4	-	961	4	ISM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	46	1712	46	-1712	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGAGATGCCCGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	117749183	117747551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117747899_117748091_117748316_117748511_117748625_117748906
ENSMUSG00000028541.15_117730328_117739992_1	chr4	-	1968	7	FSM	ENSMUSG00000028541.15	ENST00000309519.8	1972	7	5	-1	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTGTCTGTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	117739992	117730327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117739908
ENSMUSG00000028541.15_117734362_117739332_1	chr4	-	867	5	ISM	ENSMUSG00000028541.15	ENST00000356836.10	2634	7	724	4031	665	-3863	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGATCAATGGCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	117739332	117734361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117739303
ENSMUSG00000028541.15_117734634_117739488_1	chr4	-	970	4	ISM	ENSMUSG00000028541.15	ENST00000356836.10	2634	7	568	4303	509	-4135	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTCTCTTAGTGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	117739488	117734633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117734827_117738064_117738301_117738511_117738868_117739303
ENSMUSG00000028541.15_117734777_117739488_1	chr4	-	827	4	ISM	ENSMUSG00000028541.15	ENST00000356836.10	2634	7	568	4446	509	-4278	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCACTGAAGGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	117739488	117734776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117734827_117738064_117738301_117738511_117738868_117739303
ENSMUSG00000028541.15_117738216_117739768_1	chr4	-	906	3	ISM	ENSMUSG00000028541.15	ENST00000356836.10	2634	7	288	7885	229	-7717	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTCTCCACCCGACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	117739768	117738215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117738301_117738511_117738868_117739303
ENSMUSG00000028541.15_117738590_117739946_1	chr4	-	921	2	ISM	ENSMUSG00000028541.15	ENST00000356836.10	2634	7	110	8259	51	-8091	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGAAGTGCCCAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	117739946	117738589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117738868_117739303
ENSMUSG00000028541.15_117738694_117739999_1	chr4	-	870	2	ISM	ENSMUSG00000028541.15	ENST00000356836.10	2634	7	57	8363	-2	-8195	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCGCTTCAGTACCC	NA	NA	NA	NA	NA	NA	NA	NA	117739999	117738693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117738868_117739303
ENSMUSG00000028542.18_117706396_117725534_1	chr4	+	2386	14	NNC	ENSMUSG00000028542.18	novel	2320	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGGATGGCTGCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	117706395	117725534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_117706664_117712319_117712476_117713071_117713229_117713886_117714019_117714399_117714662_117720625_117720763_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ENSMUSG00000028542.18_117706396_117725534_2	chr4	+	2391	14	NIC	ENSMUSG00000028542.18	novel	2320	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGGATGGCTGCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	117706395	117725534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_117706664_117712319_117712476_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ENSMUSG00000028542.18_117706396_117725534_3	chr4	+	2390	14	NNC	ENSMUSG00000028542.18	novel	2320	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1041	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGGATGGCTGCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	117706395	117725534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_117706664_117712319_117712476_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721951_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ENSMUSG00000028542.18_117706396_117725534_4	chr4	+	2378	14	NNC	ENSMUSG00000028542.18	novel	2320	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGGATGGCTGCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	117706395	117725534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_117706664_117712319_117712476_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720746_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ENSMUSG00000028542.18_117706396_117725534_5	chr4	+	2380	14	NNC	ENSMUSG00000028542.18	novel	2320	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGGATGGCTGCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	117706395	117725534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_117706664_117712319_117712476_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722284_117722392_117722494_117724955_117725127_117725244
ENSMUSG00000028542.18_117706396_117725534_6	chr4	+	2385	14	NNC	ENSMUSG00000028542.18	novel	2320	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGGATGGCTGCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	117706395	117725534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_117706664_117712319_117712476_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721607_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ENSMUSG00000028542.18_117706567_117714624_1	chr4	+	611	4	ISM	ENSMUSG00000028542.18	ENST00000357730.6	2160	13	171	10835	0	-10835	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACTACACCTTGCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	117706566	117714624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_117706664_117713071_117713229_117713886_117714019_117714399
ENSMUSG00000028546.18_110063181_110068703_1	chr4	-	757	2	ISM	ENSMUSG00000028546.18	ENST00000650764.1	1803	6	76085	43	75383	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGATGACCATTCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	110068703	110063180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_110063857_110068622
ENSMUSG00000028546.18_110063256_110068755_1	chr4	-	734	2	ISM	ENSMUSG00000028546.18	ENST00000650764.1	1803	6	76033	118	75331	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATACATAGATAGCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	110068755	110063255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_110063857_110068622
ENSMUSG00000028546.18_110063305_110068809_1	chr4	-	739	2	ISM	ENSMUSG00000028546.18	ENST00000650764.1	1803	6	75979	167	75277	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGATGCATTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	110068809	110063304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_110063857_110068622
ENSMUSG00000028546.18_110063556_110068679_1	chr4	-	397	3	ISM	ENSMUSG00000028546.18	ENSMUST00000102722.9	4107	7	75407	2622	75407	-418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACCAACAAAGCCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	110068679	110063555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_110063857_110066936_110066976_110068622
ENSMUSG00000028546.18_110063556_110083850_1	chr4	-	790	4	ISM	ENSMUSG00000028546.18	ENST00000650764.1	1803	6	60938	418	60236	-418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACCAACAAAGCCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	110083850	110063555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_110063857_110068622_110068849_110070324_110070479_110083741
ENSMUSG00000028546.18_110063664_110108533_1	chr4	-	733	5	ISM	ENSMUSG00000028546.18	ENST00000650764.1	1803	6	36255	526	35553	-526	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGATTCGGCTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	110108533	110063663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_110063857_110068622_110068849_110070324_110070479_110083741_110083846_110108477
ENSMUSG00000028546.18_110063705_110108593_1	chr4	-	752	5	ISM	ENSMUSG00000028546.18	ENST00000650764.1	1803	6	36195	567	35493	-567	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAACGTCAAGGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	110108593	110063704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_110063857_110068622_110068849_110070324_110070479_110083741_110083846_110108477
ENSMUSG00000028546.18_110063710_110068789_1	chr4	-	353	3	ISM	ENSMUSG00000028546.18	ENSMUST00000102722.9	4107	7	75297	2776	75297	-572	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCAGTGAACAACGTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	110068789	110063709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_110063857_110066936_110066976_110068622
ENSMUSG00000028546.18_110063742_110070344_1	chr4	-	400	4	ISM	ENSMUSG00000028546.18	ENSMUST00000102722.9	4107	7	73742	2808	73742	-604	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCCTCTGGCAGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	110070344	110063741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_110063857_110066936_110066976_110068622_110068849_110070324
ENSMUSG00000028546.18_110063766_110108643_1	chr4	-	741	5	ISM	ENSMUSG00000028546.18	ENST00000650764.1	1803	6	36145	628	35443	-628	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTCCCCTGATTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	110108643	110063765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_110063857_110068622_110068849_110070324_110070479_110083741_110083846_110108477
ENSMUSG00000028546.18_110063813_110070396_1	chr4	-	381	4	ISM	ENSMUSG00000028546.18	ENSMUST00000102722.9	4107	7	73690	2879	73690	-675	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATCCCTGGTCACACA	NA	NA	NA	NA	NA	NA	NA	NA	110070396	110063812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_110063857_110066936_110066976_110068622_110068849_110070324
ENSMUSG00000028546.18_110068649_110144515_1	chr4	-	785	5	ISM	ENSMUSG00000028546.18	ENST00000650764.1	1803	6	273	5511	209	-5511	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCACCACCAGGCTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	110144515	110068648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110144429
ENSMUSG00000028546.18_110068730_110144557_1	chr4	-	746	5	ISM	ENSMUSG00000028546.18	ENST00000650764.1	1803	6	231	5592	167	-5592	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAACAACCCCAGCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	110144557	110068729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110144429
ENSMUSG00000028546.18_110068784_110144613_1	chr4	-	748	5	ISM	ENSMUSG00000028546.18	ENST00000650764.1	1803	6	175	5646	111	-5646	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGAATGGCCAGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	110144613	110068783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110144429
ENSMUSG00000028546.18_110070414_110144724_1	chr4	-	705	4	ISM	ENSMUSG00000028546.18	ENST00000650764.1	1803	6	64	7276	0	-7276	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGACCATGACCCAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	110144724	110070413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_110070479_110083741_110083846_110108477_110108719_110144429
ENSMUSG00000028546.18_110083806_110147916_1	chr4	-	367	3	ISM	ENSMUSG00000028546.18	ENST00000651347.1	1775	7	198	20676	198	-20668	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATGCAGAGAAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	110147916	110083805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_110083846_110108477_110108719_110147830
ENSMUSG00000028546.18_110083806_110147965_1	chr4	-	416	3	ISM	ENSMUSG00000028546.18	ENST00000651347.1	1775	7	149	20676	149	-20668	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATGCAGAGAAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	110147965	110083805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_110083846_110108477_110108719_110147830
ENSMUSG00000028557.11_109308674_109333388_1	chr4	-	3198	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	484	379	484	-379	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAACCCTAAGACAACATT	NA	NA	NA	NA	NA	NA	NA	NA	109333388	109308673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_109311620_109314094_109314265_109333306
ENSMUSG00000028559.18_108918342_108929281_1	chr4	-	2210	10	ISM	ENSMUSG00000028559.18	ENSMUST00000084366.13	3134	21	45938	0	45938	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGACTGCAGTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	108929281	108918341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139
ENSMUSG00000028559.18_108918495_108930090_1	chr4	-	2081	11	ISM	ENSMUSG00000028559.18	ENSMUST00000084366.13	3134	21	45129	153	45129	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCATTGCCATCCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	108930090	108918494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010
ENSMUSG00000028559.18_108918661_108930346_1	chr4	-	2067	12	ISM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	44887	-186	44873	151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTATGTTTACTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	108930346	108918660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233
ENSMUSG00000028559.18_108918852_108991017_1	chr4	-	2603	21	ISM	ENSMUSG00000028559.18	ENSMUST00000194478.6	2903	24	68414	40	-15784	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	108991017	108918851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108965077_108965147_108990940
ENSMUSG00000028559.18_108918984_108944662_1	chr4	-	2080	15	ISM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	30571	137	30557	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGGAAATTTCATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	108944662	108918983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591
ENSMUSG00000028559.18_108919171_108959789_1	chr4	-	2177	20	ISM	ENSMUSG00000028559.18	ENSMUST00000084366.13	3134	21	15430	829	15430	105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGTCTCAGCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	108959789	108919170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693
ENSMUSG00000028559.18_108919284_108975219_1	chr4	-	2192	21	FSM	ENSMUSG00000028559.18	ENSMUST00000084366.13	3134	21	0	942	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCTGTGGCAGTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	108975219	108919283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ENSMUSG00000028559.18_108925680_109059414_1	chr4	-	1310	16	ISM	ENSMUSG00000028559.18	ENSMUST00000030288.14	2871	24	55	6828	0	-6396	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTCGGCCTTCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	109059414	108925679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ENSMUSG00000028559.18_108925707_109059469_1	chr4	-	1338	16	ISM	ENSMUSG00000028559.18	ENSMUST00000030288.14	2871	24	0	6855	0	-6423	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGAATGGTTCAGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	109059469	108925706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ENSMUSG00000028560.12_98812201_98823780_1	chr4	+	3437	9	NNC	ENSMUSG00000028560.12	novel	3527	9	NA	NA	85	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	98812200	98823780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817935_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ENSMUSG00000028563.17_98258728_98271331_1	chr4	-	301	4	ISM	ENSMUSG00000028563.17	ENSMUST00000102793.11	1027	7	212	15121	152	-15121	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATCCTTCACCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	98271331	98258727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_98258821_98263156_98263266_98268854_98268929_98271306
ENSMUSG00000028563.17_98268855_98271543_1	chr4	-	315	2	NNC	ENSMUSG00000028563.17	novel	1027	7	NA	NA	0	-25248	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATTTCTAGAATCATG	NA	NA	NA	NA	NA	NA	NA	NA	98271543	98268854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_98268929_98271302
ENSMUSG00000028567.9_108691832_108718707_1	chr4	+	708	7	FSM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	34	617	34	-585	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCCACCAGAAACCATGC	NA	NA	NA	NA	NA	NA	NA	NA	108691831	108718707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
ENSMUSG00000028567.9_108691832_108718757_1	chr4	+	758	7	FSM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	34	567	34	-535	multi-exon	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGAGGCCACTGACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	108691831	108718757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
ENSMUSG00000028567.9_108691962_108718832_1	chr4	+	703	7	FSM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	164	492	164	-460	multi-exon	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCCATTCCTTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	108691961	108718832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
ENSMUSG00000028567.9_108703188_108719034_1	chr4	+	773	6	ISM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	11390	290	-2456	-258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGGTAACCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	108703187	108719034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108703209_108710365_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
ENSMUSG00000028567.9_108705714_108719324_1	chr4	+	1385	5	FSM	ENSMUSG00000028567.9	ENST00000648686.1	1423	5	70	-32	70	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGCCTTTGGTTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	108705713	108719324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_108706110_108713344_108713419_108715121_108715192_108716471_108716556_108718563
ENSMUSG00000028567.9_108705714_108719324_2	chr4	+	1384	5	NNC	ENSMUSG00000028567.9	novel	1423	5	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGCCTTTGGTTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	108705713	108719324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_108706110_108713345_108713419_108715121_108715192_108716471_108716556_108718563
ENSMUSG00000028567.9_108705714_108719324_3	chr4	+	1378	5	NNC	ENSMUSG00000028567.9	novel	1423	5	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGCCTTTGGTTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	108705713	108719324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_108706110_108713344_108713419_108715128_108715192_108716471_108716556_108718563
ENSMUSG00000028567.9_108710393_108719027_1	chr4	+	718	5	ISM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	18595	297	4749	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTTTGTCTTGGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	108710392	108719027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
ENSMUSG00000028568.17_108670423_108673492_1	chr4	-	1257	2	ISM	ENSMUSG00000028568.17	ENST00000313334.13	2375	7	17297	0	15636	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGAACAGGGAAAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	108673492	108670422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108670482_108672294
ENSMUSG00000028568.17_108673006_108676434_1	chr4	-	1240	3	ISM	ENSMUSG00000028568.17	ENSMUST00000102739.2	723	6	12694	-1023	12694	-610	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATAAATAGGCATTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	108676434	108673005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108674084_108675381_108675442_108676332
ENSMUSG00000028568.17_108673006_108676534_1	chr4	-	1340	3	ISM	ENSMUSG00000028568.17	ENSMUST00000102739.2	723	6	12594	-1023	12594	-610	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATAAATAGGCATTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	108676534	108673005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108674084_108675381_108675442_108676332
ENSMUSG00000028568.17_108673154_108683410_1	chr4	-	1306	4	ISM	ENSMUSG00000028568.17	ENSMUST00000102739.2	723	6	5718	-875	5718	-758	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGCTTCCTAATTAAC	NA	NA	NA	NA	NA	NA	NA	NA	108683410	108673153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296
ENSMUSG00000028568.17_108673154_108687780_1	chr4	-	1372	5	ISM	ENSMUSG00000028568.17	ENSMUST00000102739.2	723	6	1348	-875	1348	-758	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGCTTCCTAATTAAC	NA	NA	NA	NA	NA	NA	NA	NA	108687780	108673153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714
ENSMUSG00000028568.17_108673271_108690751_1	chr4	-	1302	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	60	1779	0	644	multi-exon	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTGAGAGAGTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	108690751	108673270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
ENSMUSG00000028568.17_108673375_108690751_1	chr4	-	1132	5	FSM	ENSMUSG00000028568.17	ENST00000472944.6	2140	5	29	979	0	540	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGGTGCCCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	108690751	108673374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108690704
ENSMUSG00000028573.19_95445744_95737913_1	chr4	+	1612	14	ISM	ENSMUSG00000028573.19	ENSMUST00000079223.11	1891	16	0	77263	0	28107	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTAGGATCCATGGGT	NA	NA	NA	NA	NA	NA	NA	NA	95445743	95737913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_95445829_95473468_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95700344_95700407_95710214_95710363_95725821_95725897_95732309_95732431_95737818
ENSMUSG00000028573.19_95473481_95811223_1	chr4	+	1577	14	ISM	ENSMUSG00000028573.19	ENSMUST00000079223.11	1891	16	27737	3953	0	-3818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTGTATGAAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	95473480	95811223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95700344_95700407_95710214_95710363_95725821_95725897_95732309_95732431_95737818_95737914_95811161
ENSMUSG00000028573.19_95473600_95815041_1	chr4	+	1540	15	ISM	ENSMUSG00000028573.19	ENSMUST00000079223.11	1891	16	27856	135	119	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACCTGTCCGTACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	95473599	95815041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95700344_95700407_95710214_95710363_95725821_95725897_95732309_95732431_95737818_95737914_95811161_95811224_95814959
ENSMUSG00000028573.19_95485858_95815176_1	chr4	+	1592	14	ISM	ENSMUSG00000028573.19	ENSMUST00000079223.11	1891	16	40114	0	12377	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCACTTATGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	95485857	95815176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95700344_95700407_95710214_95710363_95725821_95725897_95732309_95732431_95737818_95737914_95811161_95811224_95814959
ENSMUSG00000028576.13_94502728_94552775_1	chr4	+	1553	14	FSM	ENSMUSG00000028576.13	ENSMUST00000107104.3	1713	14	0	160	0	-160	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTACAGATTGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	94502727	94552775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94552452
ENSMUSG00000028576.13_94502728_94568297_1	chr4	+	1509	16	ISM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	0	13169	0	-13169	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGAATAGTAGCCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	94502727	94568297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170
ENSMUSG00000028576.13_94502829_94573908_1	chr4	+	1458	17	ISM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	101	7558	101	-7558	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATGACAGAAGAGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	94502828	94573908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858
ENSMUSG00000028576.13_94506202_94552935_1	chr4	+	1554	13	ISM	ENSMUSG00000028576.13	ENSMUST00000107104.3	1713	14	3474	0	3474	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCTACATCTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	94506201	94552935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94552452
ENSMUSG00000028576.13_94506202_94574022_1	chr4	+	1514	16	ISM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	3474	7444	3474	-7444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATGTTTAACAAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	94506201	94574022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858
ENSMUSG00000028576.13_94506310_94575077_1	chr4	+	1436	17	ISM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	3582	6389	3582	-6389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCACAGAAATGCCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	94506309	94575077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047
ENSMUSG00000028576.13_94510091_94575207_1	chr4	+	1537	16	ISM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	7363	6259	7363	-6259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCTTTATGTTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	94510090	94575207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047
ENSMUSG00000028576.13_94510210_94579995_1	chr4	+	1423	17	ISM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	7482	1471	7482	-1471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACTTCGTAATGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	94510209	94579995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956
ENSMUSG00000028576.13_94513000_94581232_1	chr4	+	1441	17	ISM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	10272	234	10272	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTGATGAAGCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	94512999	94581232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
ENSMUSG00000028576.13_94515278_94581350_1	chr4	+	1478	16	ISM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	12550	116	12550	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTAGCTTCCCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	94515277	94581350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
ENSMUSG00000028576.13_94515504_94581466_1	chr4	+	1544	15	ISM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	12776	0	12776	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTCCTTTTCCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	94515503	94581466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
ENSMUSG00000028577.14_94457404_94470826_1	chr4	-	1257	6	ISM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	20655	0	20655	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGAGGTTTTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	94470826	94457403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717
ENSMUSG00000028577.14_94457610_94471714_1	chr4	-	1226	7	ISM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	19767	206	19767	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTTGTCTTACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	94471714	94457609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650
ENSMUSG00000028577.14_94457657_94471763_1	chr4	-	1228	7	ISM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	19718	253	19718	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTATGTCTCCGTAT	NA	NA	NA	NA	NA	NA	NA	NA	94471763	94457656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650
ENSMUSG00000028577.14_94457832_94472198_1	chr4	-	1227	8	ISM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	19283	428	19283	-428	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGACCATAACATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	94472198	94457831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069
ENSMUSG00000028577.14_94457892_94472239_1	chr4	-	1208	8	ISM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	19242	488	19242	-488	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATAAGAACATTCATATT	NA	NA	NA	NA	NA	NA	NA	NA	94472239	94457891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069
ENSMUSG00000028577.14_94458089_94475071_1	chr4	-	1229	10	ISM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	16410	685	16410	-685	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATTTCTGCAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	94475071	94458088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989
ENSMUSG00000028577.14_94459924_94475535_1	chr4	-	1275	10	ISM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	15946	2520	15946	-2520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATAAGTAGTCTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	94475535	94459923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517
ENSMUSG00000028577.14_94459924_94475597_1	chr4	-	1337	10	ISM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	15884	2520	15884	-2520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATAAGTAGTCTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	94475597	94459923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517
ENSMUSG00000028577.14_94462218_94475824_1	chr4	-	1315	10	ISM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	15657	4814	15657	-4814	internal_fragment	TRUE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTATATTCATATTTG	NA	NA	NA	NA	NA	NA	NA	NA	94475824	94462217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723
ENSMUSG00000028577.14_94463443_94478189_1	chr4	-	1244	10	ISM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	13292	6039	13292	-6039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGGACACCACCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	94478189	94463442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117
ENSMUSG00000028577.14_94470780_94491144_1	chr4	-	1237	9	ISM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	337	13376	337	-13376	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATAACACAAAAGGTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	94491144	94470779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ENSMUSG00000028577.14_94470824_94491213_1	chr4	-	1262	9	ISM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	268	13420	268	-13420	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGAATCCCATGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	94491213	94470823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ENSMUSG00000028577.14_94470883_94491256_1	chr4	-	1246	9	ISM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	225	13479	225	-13479	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATATAATGTCAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	94491256	94470882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ENSMUSG00000028577.14_94471650_94491372_1	chr4	-	1308	8	ISM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	109	14246	109	-14246	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCAATTTCTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	94491372	94471649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ENSMUSG00000028577.14_94472067_94491481_1	chr4	-	1261	7	ISM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	0	14663	0	-14663	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATTTATTACAGTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	94491481	94472066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ENSMUSG00000028580.16_130396398_130474381_1	chr4	+	1296	9	ISM	ENSMUSG00000028580.16	ENSMUST00000097862.3	3991	22	5681	33184	5681	-33184	internal_fragment	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTACAAACTCTGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	130396397	130474381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288
ENSMUSG00000028580.16_130396545_130476803_1	chr4	+	1289	10	ISM	ENSMUSG00000028580.16	ENSMUST00000097862.3	3991	22	5828	30762	5828	-30762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCAGCAGTGAATTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	130396544	130476803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722
ENSMUSG00000028580.16_130445494_130478826_1	chr4	+	1274	9	ISM	ENSMUSG00000028580.16	ENSMUST00000097862.3	3991	22	54777	28739	54777	-28739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCTTGTTGCTCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	130445493	130478826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736
ENSMUSG00000028580.16_130446536_130480047_1	chr4	+	1276	9	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	55819	-27518	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCAGTAACTCCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	130446535	130480047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479967
ENSMUSG00000028580.16_130455402_130481370_1	chr4	+	1310	9	NIC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	64685	-26195	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTATTCCTCCTCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	130455401	130481370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479967_130480184_130481252
ENSMUSG00000028580.16_130457747_130490134_1	chr4	+	1267	9	NIC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	67030	-17431	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTGCCTCCAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	130457746	130490134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479967_130480184_130481252_130481490_130490064
ENSMUSG00000028581.18_130654081_130662389_1	chr4	+	1134	6	ISM	ENSMUSG00000028581.18	ENSMUST00000151698.8	2600	8	13645	1063	0	19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1770	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAGAAATAGAAACGG	NA	NA	NA	NA	NA	NA	NA	NA	130654080	130662389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
ENSMUSG00000028581.18_130654081_130662389_2	chr4	+	1132	6	NNC	ENSMUSG00000028581.18	novel	1119	6	NA	NA	0	19	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1770	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAGAAATAGAAACGG	NA	NA	NA	NA	NA	NA	NA	NA	130654080	130662389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_130654153_130655947_130656078_130656730_130656854_130658081_130658178_130659327_130659421_130661771
ENSMUSG00000028582.15_108485026_108485802_1	chr4	+	316	3	ISM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	7889	5518	7889	-5518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGGGACTTCATCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	108485025	108485802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108485146_108485226_108485400_108485779
ENSMUSG00000028582.15_108485333_108486964_1	chr4	+	303	4	ISM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	8196	4356	8196	-4356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCAAGCCCAGGGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	108485332	108486964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108485400_108485779_108485906_108486770_108486830_108486913
ENSMUSG00000028583.15_142994001_143026134_1	chr4	-	1812	6	NNC	ENSMUSG00000028583.15	novel	1817	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGCCAACATTTGACACT	NA	NA	NA	NA	NA	NA	NA	NA	143026134	142994000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_142994988_142995753_142995870_142997092_142997132_143000469_143000627_143002640_143002778_143025758
ENSMUSG00000028583.15_142994001_143026134_2	chr4	-	1808	6	NNC	ENSMUSG00000028583.15	novel	1817	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGCCAACATTTGACACT	NA	NA	NA	NA	NA	NA	NA	NA	143026134	142994000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_142994997_142995757_142995870_142997092_142997123_143000469_143000627_143002640_143002778_143025758
ENSMUSG00000028583.15_142994001_143026134_3	chr4	-	1808	6	NNC	ENSMUSG00000028583.15	novel	1817	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGCCAACATTTGACACT	NA	NA	NA	NA	NA	NA	NA	NA	143026134	142994000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002769_143025758
ENSMUSG00000028599.11_144942447_144954108_1	chr4	-	387	3	FSM	ENSMUSG00000028599.11	ENST00000376259.7	552	3	41	124	41	-124	multi-exon	TRUE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAAGCCCTTGCCCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	144954108	144942446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_144942671_144946298_144946427_144954073
ENSMUSG00000028601.19_108022715_108031205_1	chr4	+	559	7	ISM	ENSMUSG00000028601.19	ENSMUST00000116309.10	1238	11	52	5299	0	-5060	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGGCGTGGCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	108022714	108031205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183
ENSMUSG00000028601.19_108022715_108031245_1	chr4	+	599	7	ISM	ENSMUSG00000028601.19	ENSMUST00000116309.10	1238	11	52	5259	0	-5020	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGCGACTGAACGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	108022714	108031245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183
ENSMUSG00000028601.19_108022821_108031311_1	chr4	+	559	7	ISM	ENSMUSG00000028601.19	ENSMUST00000116309.10	1238	11	158	5193	106	-4954	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGGGTAACGCTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	108022820	108031311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183
ENSMUSG00000028601.19_108031007_108036356_1	chr4	+	582	5	ISM	ENSMUSG00000028601.19	ENSMUST00000116307.8	893	9	8292	-91	8292	91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTTACTTACTCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	108031006	108036356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ENSMUSG00000028601.19_108034268_108036505_1	chr4	+	503	3	ISM	ENSMUSG00000028601.19	ENSMUST00000116309.10	1238	11	11605	-1	11553	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGCTGGAATTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	108034267	108036505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108034321_108035567_108035616_108036103
ENSMUSG00000028603.16_107901234_107921139_1	chr4	-	1076	4	ISM	ENSMUSG00000028603.16	ENSMUST00000106701.2	772	5	7477	-513	7420	-184	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGCTTCAAATTATAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	107921139	107901233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082
ENSMUSG00000028603.16_107901465_107931660_1	chr4	-	1153	6	ISM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	44069	429	-3044	282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACTAAAAGTTTAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	107931660	107901464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552
ENSMUSG00000028603.16_107901575_107942499_1	chr4	-	1191	7	ISM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	33230	539	-13883	172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGGGGGACTAGAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	107942499	107901574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351
ENSMUSG00000028603.16_107901747_107944263_1	chr4	-	1074	8	ISM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	31466	711	-15647	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTACTGTGCTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	107944263	107901746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208
ENSMUSG00000028603.16_107901747_107944315_1	chr4	-	1126	8	ISM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	31414	711	-15699	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTACTGTGCTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	107944315	107901746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208
ENSMUSG00000028603.16_107901747_107944359_1	chr4	-	1170	8	ISM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	31370	711	-15743	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTACTGTGCTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	107944359	107901746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208
ENSMUSG00000028603.16_107901876_107948500_1	chr4	-	1108	9	ISM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	27229	840	-19884	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTTAGACTGACACCTC	NA	NA	NA	NA	NA	NA	NA	NA	107948500	107901875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433
ENSMUSG00000028603.16_107902032_107955345_1	chr4	-	1163	11	ISM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	20384	996	20384	-285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAAACTGAAGATTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	107955345	107902031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218
ENSMUSG00000028603.16_107904786_107955345_1	chr4	-	1153	10	ISM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	20384	3750	20384	-3039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACAGGGGCTCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	107955345	107904785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218
ENSMUSG00000028603.16_107912656_107962263_1	chr4	-	1140	11	ISM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	13466	11620	13466	-10909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGCTTCCCAATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	107962263	107912655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240
ENSMUSG00000028603.16_107912722_107962323_1	chr4	-	1134	11	ISM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	13406	11686	13406	-10975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGAAAGATGGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	107962323	107912721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240
ENSMUSG00000028603.16_107921153_107964859_1	chr4	-	1115	11	ISM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	10870	20117	10870	-19406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGCTCTGCAGGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	107964859	107921152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813
ENSMUSG00000028603.16_107928454_107969481_1	chr4	-	1166	11	ISM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	6248	27418	6248	-26707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGACATTCTAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	107969481	107928453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423
ENSMUSG00000028603.16_107928561_107975629_1	chr4	-	1113	12	ISM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	100	27525	100	-26814	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGAGGCAGGTTCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	107975629	107928560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ENSMUSG00000028607.17_107761342_107764236_1	chr4	-	538	2	ISM	ENSMUSG00000028607.17	ENSMUST00000030345.15	2372	5	16571	164	16461	51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGTGCTTGAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	107764236	107761341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107761761_107764117
ENSMUSG00000028607.17_107761393_107780682_1	chr4	-	2095	5	NNC	ENSMUSG00000028607.17	novel	2112	5	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATTGGTGTTCATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	107780682	107761392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_107761761_107764052_107765423_107769839_107769945_107771460_107771542_107780511
ENSMUSG00000028607.17_107761393_107780682_2	chr4	-	2092	5	NNC	ENSMUSG00000028607.17	novel	2112	5	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATTGGTGTTCATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	107780682	107761392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_107761756_107764052_107765423_107769837_107769945_107771460_107771542_107780511
ENSMUSG00000028607.17_107761393_107780682_3	chr4	-	2095	5	NNC	ENSMUSG00000028607.17	novel	2112	5	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATTGGTGTTCATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	107780682	107761392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_107761761_107764052_107765423_107769837_107769945_107771460_107771542_107780513
ENSMUSG00000028607.17_107761393_107780682_4	chr4	-	2091	5	NNC	ENSMUSG00000028607.17	novel	2112	5	NA	NA	15	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATTGGTGTTCATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	107780682	107761392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_107761761_107764052_107765423_107769837_107769945_107771466_107771542_107780511
ENSMUSG00000028607.17_107761393_107780682_5	chr4	-	2097	5	FSM	ENSMUSG00000028607.17	ENST00000636891.1	2112	5	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATTGGTGTTCATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	107780682	107761392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_107761761_107764052_107765423_107769837_107769945_107771460_107771542_107780511
ENSMUSG00000028609.7_107737085_107740324_1	chr4	+	177	3	ISM	ENSMUSG00000028609.7	ENSMUST00000030348.6	692	5	133	4297	46	-4275	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAAGAAGATGATGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	107737084	107740324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107737143_107738089_107738149_107740264
ENSMUSG00000028609.7_107740330_107744417_1	chr4	+	173	3	ISM	ENSMUSG00000028609.7	ENSMUST00000030348.6	692	5	3378	204	3291	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTTTAGTCTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	107740329	107744417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107740376_107742113_107742197_107744373
ENSMUSG00000028609.7_107742140_107744474_1	chr4	+	158	2	ISM	ENSMUSG00000028609.7	ENST00000371466.4	472	4	5101	125	5101	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGGATATTGTGGACACA	NA	NA	NA	NA	NA	NA	NA	NA	107742139	107744474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107742197_107744373
ENSMUSG00000028617.11_107090714_107093055_1	chr4	-	527	2	ISM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	17674	3	17674	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTGCTTTTGAATTGC	NA	NA	NA	NA	NA	NA	NA	NA	107093055	107090713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107091182_107092996
ENSMUSG00000028617.11_107090956_107096997_1	chr4	-	514	4	ISM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	13732	245	13732	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGGGATTTGCTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	107096997	107090955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908
ENSMUSG00000028617.11_107092997_107100536_1	chr4	-	539	5	ISM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	10193	2286	10193	-2286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAAATTCTATGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	107100536	107092996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404
ENSMUSG00000028617.11_107096318_107104577_1	chr4	-	498	5	ISM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	6152	5607	6152	-5607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGATCATAGTAACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	107104577	107096317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490
ENSMUSG00000028617.11_107096369_107104628_1	chr4	-	498	5	ISM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	6101	5658	6101	-5658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTCCGGGCAAACATAG	NA	NA	NA	NA	NA	NA	NA	NA	107104628	107096368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490
ENSMUSG00000028617.11_107098195_107104835_1	chr4	-	500	3	ISM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	5894	7484	5894	-7484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTGCTTATCTGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	107104835	107098194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107098218_107100404_107100537_107104490
ENSMUSG00000028617.11_107104508_107110493_1	chr4	-	492	2	ISM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	236	13797	236	-13797	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCTTGCGAAACAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	107110493	107104507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107104978_107110471
ENSMUSG00000028617.11_107104610_107110627_1	chr4	-	524	2	ISM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	102	13899	102	-13899	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGCTGCTGAAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	107110627	107104609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107104978_107110471
ENSMUSG00000028618.12_107035864_107043080_1	chr4	+	353	2	NNC	ENSMUSG00000028618.12	novel	1775	8	NA	NA	140	-14815	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGGCTATGCTAATGA	NA	NA	NA	NA	NA	NA	NA	NA	107035863	107043080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_107036115_107042978
ENSMUSG00000028618.12_107035923_107044910_1	chr4	+	393	3	ISM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	327	13283	199	-12985	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACACAATCCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	107035922	107044910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107036115_107042974_107043081_107044815
ENSMUSG00000028618.12_107036041_107047884_1	chr4	+	428	4	ISM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	445	10309	317	-10011	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGTGTTTTACAC	NA	NA	NA	NA	NA	NA	NA	NA	107036040	107047884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731
ENSMUSG00000028618.12_107042973_107049740_1	chr4	+	438	4	ISM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	7377	8453	7249	-8155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTTATTTTAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	107042972	107049740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107043081_107044815_107044911_107047731_107047885_107049658
ENSMUSG00000028618.12_107043051_107050526_1	chr4	+	391	5	ISM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	7455	7667	7327	-7369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTACCTTGAAGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	107043050	107050526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495
ENSMUSG00000028618.12_107044815_107050577_1	chr4	+	413	4	ISM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	9219	7616	9091	-7318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATTTCTTTTTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	107044814	107050577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107044911_107047731_107047885_107049658_107049741_107050495
ENSMUSG00000028618.12_107044881_107054720_1	chr4	+	365	5	ISM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	9285	3473	9157	-3175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACAACCCTTGTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	107044880	107054720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702
ENSMUSG00000028618.12_107047845_107057703_1	chr4	+	452	5	ISM	ENSMUSG00000028618.12	ENSMUST00000106753.3	1148	6	12121	192	12121	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCACTCAGAAATCTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	107047844	107057703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ENSMUSG00000028618.12_107054703_107057896_1	chr4	+	441	2	ISM	ENSMUSG00000028618.12	ENSMUST00000106753.3	1148	6	18979	-1	18979	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGTTGTATTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	107054702	107057896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107054812_107057564
ENSMUSG00000028619.16_106994183_107004782_1	chr4	-	2885	2	ISM	ENSMUSG00000028619.16	ENSMUST00000058585.14	766	5	30697	-2591	30697	2547	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGACAGGTCTAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	107004782	106994182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106996997_107004711
ENSMUSG00000028619.16_106994309_107004898_1	chr4	-	2875	2	ISM	ENSMUSG00000028619.16	ENSMUST00000058585.14	766	5	30581	-2465	30581	2421	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTGAGAAAAGAGGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	107004898	106994308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106996997_107004711
ENSMUSG00000028619.16_106994786_107035631_1	chr4	-	2884	5	FSM	ENSMUSG00000028619.16	ENSMUST00000057043.10	6431	5	113	3434	113	1944	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCCCCGCAGATAACCAT	NA	NA	NA	NA	NA	NA	NA	NA	107035631	106994785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_106996997_107004711_107004906_107022744_107022887_107034761_107034902_107035434
ENSMUSG00000028619.16_106994847_107035744_1	chr4	-	2936	5	FSM	ENSMUSG00000028619.16	ENSMUST00000057043.10	6431	5	0	3495	0	1883	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGGTGCCGGGCTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	107035744	106994846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_106996997_107004711_107004906_107022744_107022887_107034761_107034902_107035434
ENSMUSG00000028622.12_106913071_106919265_1	chr4	-	779	4	ISM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	4800	0	4800	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTCTGTGAGATATTA	NA	NA	NA	NA	NA	NA	NA	NA	106919265	106913070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079
ENSMUSG00000028622.12_106913172_106921818_1	chr4	-	829	6	ISM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	2247	101	2247	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGTCCTGGGACGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	106921818	106913171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783
ENSMUSG00000028622.12_106914621_106921967_1	chr4	-	796	5	ISM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	2098	1550	2098	-1550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTACCGGCACTTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	106921967	106914620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783
ENSMUSG00000028622.12_106914621_106923684_1	chr4	-	834	6	ISM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	381	1550	381	-1550	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTACCGGCACTTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	106923684	106914620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
ENSMUSG00000028622.12_106917680_106923821_1	chr4	-	819	5	ISM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	244	4609	244	-4609	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTGTGTGGAGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	106923821	106917679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
ENSMUSG00000028629.10_120779251_120782202_1	chr4	-	1138	2	FSM	ENSMUSG00000028629.10	ENSMUST00000030375.9	1996	2	0	858	0	-852	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCTGCCAGCTCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	120782202	120779250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_120779894_120781707
ENSMUSG00000028631.8_120555112_120570228_1	chr4	-	795	6	ISM	ENSMUSG00000028631.8	ENST00000509682.6	1929	13	34145	21	34145	-21	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGCACCAACATGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	120570228	120555111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120555304_120555695_120555826_120557088_120557221_120559582_120559683_120561551_120561773_120570208
ENSMUSG00000028631.8_120555260_120572213_1	chr4	-	748	7	ISM	ENSMUSG00000028631.8	ENST00000509682.6	1929	13	32160	169	32160	-169	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCGCTGCCTCCGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	120572213	120555259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120555304_120555695_120555826_120557088_120557221_120559582_120559683_120561551_120561773_120570208_120570298_120572181
ENSMUSG00000028631.8_120555760_120572513_1	chr4	-	770	7	ISM	ENSMUSG00000028631.8	ENST00000509682.6	1929	13	31860	669	31860	-669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGACACGGAGGCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	120572513	120555759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120555826_120557088_120557221_120559582_120559683_120561551_120561773_120570208_120570298_120572181_120572278_120572447
ENSMUSG00000028631.8_120557160_120573042_1	chr4	-	758	7	ISM	ENSMUSG00000028631.8	ENST00000509682.6	1929	13	31331	2069	31331	-2069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGATGTCATTGAGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	120573042	120557159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120557221_120559582_120559683_120561551_120561773_120570208_120570298_120572181_120572278_120572447_120572559_120572962
ENSMUSG00000028631.8_120559629_120573812_1	chr4	-	761	7	ISM	ENSMUSG00000028631.8	ENST00000509682.6	1929	13	30561	4538	30561	-4538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGATGTCATGCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120573812	120559628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120559683_120561551_120561773_120570208_120570298_120572181_120572278_120572447_120572559_120572962_120573089_120573748
ENSMUSG00000028631.8_120559666_120573885_1	chr4	-	797	7	ISM	ENSMUSG00000028631.8	ENST00000509682.6	1929	13	30488	4575	30488	-4575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCCGAGGAGAAGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	120573885	120559665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120559683_120561551_120561773_120570208_120570298_120572181_120572278_120572447_120572559_120572962_120573089_120573748
ENSMUSG00000028631.8_120561748_120574249_1	chr4	-	751	7	ISM	ENSMUSG00000028631.8	ENST00000509682.6	1929	13	30124	6657	30124	-6657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCGCATAAGCAGCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	120574249	120561747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120561773_120570208_120570298_120572181_120572278_120572447_120572559_120572962_120573089_120573748_120573925_120574121
ENSMUSG00000028631.8_120570209_120574745_1	chr4	-	816	7	ISM	ENSMUSG00000028631.8	ENST00000509682.6	1929	13	29628	15118	29628	-15118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGCTGCGGGAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	120574745	120570208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120570298_120572181_120572278_120572447_120572559_120572962_120573089_120573748_120573925_120574121_120574249_120574654
ENSMUSG00000028631.8_120572181_120604137_1	chr4	-	809	7	ISM	ENSMUSG00000028631.8	ENST00000509682.6	1929	13	236	17090	236	-17090	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACGATGCTTAGGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	120604137	120572180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120572278_120572447_120572559_120572962_120573089_120573748_120573925_120574121_120574249_120574654_120574746_120604056
ENSMUSG00000028631.8_120572992_120604330_1	chr4	-	765	5	ISM	ENSMUSG00000028631.8	ENST00000509682.6	1929	13	43	17901	43	-17901	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGCCGACTCGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	120604330	120572991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120573089_120573748_120573925_120574121_120574249_120574654_120574746_120604056
ENSMUSG00000028633.8_120397065_120410209_1	chr4	-	1695	11	ISM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	17264	0	5860	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	120410209	120397064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076
ENSMUSG00000028633.8_120397478_120418620_1	chr4	-	1625	15	ISM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	8853	413	-2551	227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1009	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTTGCTGACATCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	120418620	120397477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594
ENSMUSG00000028633.8_120397534_120418668_1	chr4	-	1617	15	ISM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	8805	469	-2599	171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1010	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATTGCTGTTGTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	120418668	120397533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594
ENSMUSG00000028633.8_120397590_120418711_1	chr4	-	1604	15	ISM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	8762	525	-2642	115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	956	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTAAGGGCCATCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	120418711	120397589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594
ENSMUSG00000028633.8_120397749_120424624_1	chr4	-	1895	18	ISM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	2849	684	3	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAAAAGCATTTGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	120424624	120397748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446
ENSMUSG00000028633.8_120397749_120424627_1	chr4	-	1893	18	NNC	ENSMUSG00000028633.8	novel	1902	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1516	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAAAAGCATTTGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	120424627	120397748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416062_120418594_120418712_120419974_120420076_120422465_120422637_120424446
ENSMUSG00000028633.8_120397749_120424627_2	chr4	-	1891	18	NNC	ENSMUSG00000028633.8	novel	1902	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1154	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAAAAGCATTTGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	120424627	120397748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400931_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446
ENSMUSG00000028633.8_120397749_120424627_3	chr4	-	1893	18	NNC	ENSMUSG00000028633.8	novel	1902	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAAAAGCATTTGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	120424627	120397748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405342_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446
ENSMUSG00000028633.8_120397749_120424627_4	chr4	-	1895	18	NNC	ENSMUSG00000028633.8	novel	1902	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAAAAGCATTTGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	120424627	120397748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401015_120402210_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446
ENSMUSG00000028633.8_120399166_120427473_1	chr4	-	1723	17	ISM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	0	2101	0	-1417	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTCCAGGCCTATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	120427473	120399165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ENSMUSG00000028636.15_119275727_119278882_1	chr4	-	870	2	ISM	ENSMUSG00000028636.15	ENSMUST00000106316.2	954	3	691	0	691	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGGGTTTCTGGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	119278882	119275726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_119276491_119278776
ENSMUSG00000028636.15_119276334_119279555_1	chr4	-	774	3	FSM	ENSMUSG00000028636.15	ENSMUST00000030385.13	1443	3	62	607	18	-607	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACATCCTGGAGTCAATA	NA	NA	NA	NA	NA	NA	NA	NA	119279555	119276333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_119276491_119278776_119278881_119279042
ENSMUSG00000028639.15_119135178_119136334_1	chr4	-	591	2	ISM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	15467	0	15467	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2013	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	NA	NA	NA	NA	NA	NA	NA	119136334	119135177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_119135565_119136130
ENSMUSG00000028639.15_119135364_119139387_1	chr4	-	595	4	ISM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	12414	186	12414	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	119139387	119135363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342
ENSMUSG00000028639.15_119135468_119139458_1	chr4	-	562	4	ISM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	12343	290	12343	-290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1394	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACCAGATAACATTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	119139458	119135467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342
ENSMUSG00000028639.15_119135513_119139514_1	chr4	-	573	4	ISM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	12287	335	12287	-335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGATTGGAGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	119139514	119135512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342
ENSMUSG00000028639.15_119136255_119139995_1	chr4	-	546	4	ISM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	11806	1077	11806	-1077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAACCACAAGATGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	119139995	119136254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_119136397_119138766_119138850_119139342_119139646_119139977
ENSMUSG00000028639.15_119136320_119140033_1	chr4	-	519	4	ISM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	11768	1142	11768	-1142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1058	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGCAGCCACCTCAACGT	NA	NA	NA	NA	NA	NA	NA	NA	119140033	119136319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_119136397_119138766_119138850_119139342_119139646_119139977
ENSMUSG00000028639.15_119138766_119151002_1	chr4	-	575	5	ISM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	799	3588	799	-3588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1436	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTCCATCATAACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	119151002	119138765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938
ENSMUSG00000028639.15_119139470_119151677_1	chr4	-	641	5	ISM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	124	4292	124	-4292	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2076	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAAGGCCAGGCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	119151677	119139469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
ENSMUSG00000028639.15_119139977_119151801_1	chr4	-	590	4	ISM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	0	4799	0	-4799	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGATGCTTTTGTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	119151801	119139976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_119140068_119142305_119142340_119150938_119151003_119151400
ENSMUSG00000028642.8_119066410_119067287_1	chr4	-	350	2	ISM	ENSMUSG00000028642.8	ENST00000536543.5	559	4	4042	-1	4042	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAACACCTGCCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	119067287	119066409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_119066615_119067142
ENSMUSG00000028642.8_119066498_119071294_1	chr4	-	440	4	ISM	ENSMUSG00000028642.8	ENSMUST00000030394.3	1452	7	4120	4194	35	-87	internal_fragment	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTCATGATCGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	119071294	119066497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_119066618_119067142_119067287_119068071_119068170_119071216
ENSMUSG00000028643.12_119052804_119058495_1	chr4	+	721	3	FSM	ENSMUSG00000028643.12	ENSMUST00000097908.4	832	3	111	0	111	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTTCTTGCTTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	119052803	119058495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_119052973_119053068_119053219_119058093
ENSMUSG00000028643.12_119052902_119058495_1	chr4	+	623	3	FSM	ENSMUSG00000028643.12	ENSMUST00000097908.4	832	3	209	0	-203	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTTCTTGCTTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	119052901	119058495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_119052973_119053068_119053219_119058093
ENSMUSG00000028645.12_118966111_118989398_1	chr4	+	234	3	ISM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	203	5782	203	-5782	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTCTCCGTGGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	118966110	118989398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_118966170_118977587_118977684_118989319
ENSMUSG00000028645.12_118989431_118989821_1	chr4	+	232	2	ISM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	23523	5359	23523	-5359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGCCCTAGGCACACTG	NA	NA	NA	NA	NA	NA	NA	NA	118989430	118989821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_118989481_118989639
ENSMUSG00000028645.12_118989794_118990451_1	chr4	+	245	2	ISM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	23886	4729	23886	-4729	internal_fragment	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGTACGGGCTGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	118989793	118990451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_118989881_118990293
ENSMUSG00000028645.12_118990320_118990655_1	chr4	+	244	2	ISM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	24412	4525	24412	-4525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGCTCACCCGCCTACCG	NA	NA	NA	NA	NA	NA	NA	NA	118990319	118990655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_118990457_118990548
ENSMUSG00000028645.12_118992983_118993541_1	chr4	+	246	2	ISM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	27075	1639	27075	-1639	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGATGAGATCGCTTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	118992982	118993541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_118993130_118993442
ENSMUSG00000028646.17_123811297_123830786_1	chr4	+	2531	7	FSM	ENSMUSG00000028646.17	ENSMUST00000030399.7	2593	7	58	4	58	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGTTTGTTGTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	123811296	123830786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_123811561_123813641_123813846_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
ENSMUSG00000028647.14_123798834_123805274_1	chr4	+	619	4	NNC	ENSMUSG00000028647.14	novel	633	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTGAGCATAGTAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	123798833	123805274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_123798881_123799026_123799100_123803649_123803760_123804885
ENSMUSG00000028647.14_123798834_123805274_2	chr4	+	629	4	FSM	ENSMUSG00000028647.14	ENST00000494695.4	633	4	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTGAGCATAGTAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	123798833	123805274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_123798881_123799026_123799100_123803639_123803760_123804885
ENSMUSG00000028648.14_123606662_123609759_1	chr4	-	161	2	FSM	ENSMUSG00000028648.14	ENSMUST00000106207.8	680	2	360	159	360	-159	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCCTCCACCTCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	123609759	123606661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_123606720_123609656
ENSMUSG00000028648.14_123609775_123611974_1	chr4	-	169	2	ISM	ENSMUSG00000028648.14	ENSMUST00000030401.14	525	3	21	3272	5	-3272	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACGCATTTGAAAAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	123611974	123609774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_123609875_123611905
ENSMUSG00000028651.13_123020908_123032818_3	chr4	-	1183	8	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	907	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	123032818	123020907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123031307_123031363_123032658
ENSMUSG00000028651.13_123020908_123032818_4	chr4	-	1193	9	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	907	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	123032818	123020907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_123021234_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658
ENSMUSG00000028651.13_123020908_123033723_1	chr4	-	1170	9	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	123033723	123020907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029501_123031318_123031363_123032658_123032758_123033694
ENSMUSG00000028651.13_123020908_123033723_2	chr4	-	1151	9	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	123033723	123020907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123031307_123031363_123032658_123032758_123033694
ENSMUSG00000028651.13_123020908_123033723_3	chr4	-	1164	9	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	123033723	123020907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029495_123031318_123031363_123032658_123032758_123033694
ENSMUSG00000028651.13_123024158_123033723_1	chr4	-	572	7	FSM	ENSMUSG00000028651.13	ENST00000470213.5	572	7	2	-2	2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGATTCTGCTGTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	123033723	123024157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_123024348_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033694
ENSMUSG00000028653.17_122910390_122948742_1	chr4	+	1996	10	FSM	ENSMUSG00000028653.17	ENST00000372818.5	1907	10	1	-90	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGCTGCATTGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	122910389	122948742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122945858_122945969_122946276_122946395_122947915
ENSMUSG00000028653.17_122910390_122948742_2	chr4	+	1992	10	NNC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGCTGCATTGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	122910389	122948742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_122910577_122933238_122933383_122937512_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122945858_122945969_122946276_122946395_122947915
ENSMUSG00000028653.17_122910492_122945969_1	chr4	+	196	2	ISM	ENSMUSG00000028653.17	ENST00000541099.5	330	3	17	425	17	-425	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATTAAGGAGGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	122910491	122945969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_122910577_122945858
ENSMUSG00000028653.17_122910492_122948742_1	chr4	+	1894	10	FSM	ENSMUSG00000028653.17	ENST00000372818.5	1907	10	103	-90	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGCTGCATTGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	122910491	122948742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122945858_122945969_122946276_122946395_122947915
ENSMUSG00000028653.17_122910492_122948742_2	chr4	+	1898	10	NNC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGCTGCATTGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	122910491	122948742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_122910577_122933238_122933391_122937512_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122945858_122945969_122946276_122946395_122947915
ENSMUSG00000028653.17_122910492_122948742_3	chr4	+	1890	10	NNC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGCTGCATTGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	122910491	122948742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_122910577_122933238_122933383_122937512_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122945858_122945969_122946276_122946395_122947915
ENSMUSG00000028653.17_122910492_122948742_4	chr4	+	1888	10	NNC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGCTGCATTGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	122910491	122948742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_122910577_122933238_122933373_122937504_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122945858_122945969_122946276_122946395_122947915
ENSMUSG00000028653.17_122910492_122948742_5	chr4	+	1888	10	NNC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGCTGCATTGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	122910491	122948742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938289_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122945858_122945969_122946276_122946395_122947915
ENSMUSG00000028653.17_122945857_122946394_1	chr4	+	230	2	ISM	ENSMUSG00000028653.17	ENST00000541099.5	330	3	35382	0	35382	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGTGCAGATGAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	122945856	122946394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_122945969_122946276
ENSMUSG00000028653.17_122945857_122946394_2	chr4	+	228	2	NNC	ENSMUSG00000028653.17	novel	330	3	NA	NA	35382	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGTGCAGATGAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	122945856	122946394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_122945969_122946278
ENSMUSG00000028656.15_122753082_122756539_1	chr4	-	1280	4	ISM	ENSMUSG00000028656.15	ENSMUST00000069533.12	2620	13	23165	242	23165	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATCAGAATCTTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	122756539	122753081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415
ENSMUSG00000028656.15_122753335_122756842_1	chr4	-	1176	5	ISM	ENSMUSG00000028656.15	ENSMUST00000069533.12	2620	13	22862	495	22862	-495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTCCTTTTCTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	122756842	122753334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693
ENSMUSG00000028656.15_122753480_122756796_1	chr4	-	985	5	ISM	ENSMUSG00000028656.15	ENSMUST00000069533.12	2620	13	22908	640	22908	-640	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTTCCACTCGACCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	122756796	122753479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693
ENSMUSG00000028656.15_122753929_122763545_1	chr4	-	1191	10	ISM	ENSMUSG00000028656.15	ENSMUST00000069533.12	2620	13	16159	1089	16159	-1089	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAATACATGGGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	122763545	122753928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486
ENSMUSG00000028656.15_122755809_122766193_1	chr4	-	1216	11	ISM	ENSMUSG00000028656.15	ENSMUST00000069533.12	2620	13	13511	2969	13511	-2969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAACTCCCTGGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	122766193	122755808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124
ENSMUSG00000028656.15_122756416_122779657_1	chr4	-	1178	10	ISM	ENSMUSG00000028656.15	ENSMUST00000106257.10	2768	13	192	3576	47	-3576	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCCCCCTTGCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	122779657	122756415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779606
ENSMUSG00000028656.15_122758388_122779758_1	chr4	-	937	8	ISM	ENSMUSG00000028656.15	ENSMUST00000106255.8	2737	13	79	5548	-54	-5548	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCACACATGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	122779758	122758387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779625
ENSMUSG00000028656.15_122758446_122779783_1	chr4	-	904	8	ISM	ENSMUSG00000028656.15	ENSMUST00000106255.8	2737	13	54	5606	54	-5606	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTCTGACGACTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	122779783	122758445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779625
ENSMUSG00000028656.15_122758478_122779837_1	chr4	-	945	8	ISM	ENSMUSG00000028656.15	ENSMUST00000106257.10	2768	13	12	5638	0	-5638	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCGCCTCCTCCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	122779837	122758477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779606
ENSMUSG00000028657.15_122730047_122751723_1	chr4	+	1295	9	FSM	ENSMUSG00000028657.15	ENST00000641319.1	1294	9	1	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTGCCTAAAAGAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	122730046	122751723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749693_122751250
ENSMUSG00000028657.15_122730047_122752601_1	chr4	+	2099	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	12	270	0	-270	multi-exon	FALSE	canonical	NA	NA	NA	NA	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGGAGAAATGACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	122730046	122752601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
ENSMUSG00000028657.15_122730047_122752601_2	chr4	+	2092	9	NNC	ENSMUSG00000028657.15	novel	2381	9	NA	NA	0	-270	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGGAGAAATGACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	122730046	122752601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_122730173_122737794_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
ENSMUSG00000028657.15_122738265_122752872_2	chr4	+	2080	7	ISM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	8230	-1	8218	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGTATAATTTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	122738264	122752872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
ENSMUSG00000028668.6_135732700_135733553_1	chr4	-	361	2	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	15521	2021	15521	-2021	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATCAGTTATACTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	135733553	135732699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135732989_135733481
ENSMUSG00000028668.6_135732789_135734443_1	chr4	-	400	3	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	14631	2110	14631	-2110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCACTGTGTGCCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	135734443	135732788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135732989_135733481_135733661_135734422
ENSMUSG00000028668.6_135732928_135735112_1	chr4	-	374	4	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	13962	2249	13962	-2249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGGACTTGCCTTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	135735112	135732927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090
ENSMUSG00000028668.6_135733515_135735199_1	chr4	-	367	3	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	13875	2836	13875	-2836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTATGATCCCAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	135735199	135733514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135733661_135734422_135734535_135735090
ENSMUSG00000028668.6_135734500_135736598_1	chr4	-	356	4	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	12476	3821	12476	-3821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAGCCACCAAGAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	135736598	135734499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135734535_135735090_135735272_135736356_135736455_135736556
ENSMUSG00000028668.6_135735231_135737119_1	chr4	-	354	4	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	11955	4552	11955	-4552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCGAGACTTTAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	135737119	135735230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135735272_135736356_135736455_135736556_135736713_135737060
ENSMUSG00000028668.6_135736424_135737585_1	chr4	-	348	4	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	11489	5745	11489	-5745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTGAACCTGTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	135737585	135736423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135736455_135736556_135736713_135737060_135737176_135737539
ENSMUSG00000028668.6_135736680_135737755_1	chr4	-	364	3	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	11319	6001	11319	-6001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCACAGGACGCAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	135737755	135736679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135736713_135737060_135737176_135737539
ENSMUSG00000028668.6_135738384_135740215_1	chr4	-	371	2	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	8859	7705	8859	-7705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTCCCCAGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	135740215	135738383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135738720_135740180
ENSMUSG00000028668.6_135738561_135748942_1	chr4	-	404	4	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	132	7882	132	-7882	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAAACTTTCTGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	135748942	135738560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135738720_135740180_135740288_135741710_135741768_135748861
ENSMUSG00000028669.16_135702991_135704568_1	chr4	-	926	2	ISM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	10007	220	10007	-220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGACCCTGCTCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	135704568	135702990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135703808_135704459
ENSMUSG00000028669.16_135703208_135713746_1	chr4	-	936	5	ISM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	829	437	829	-437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACACAAGTGTCCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	135713746	135703207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702
ENSMUSG00000028669.16_135703377_135714392_1	chr4	-	911	6	FSM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	183	606	183	-606	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCAAAAAGGATGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	135714392	135703376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702_135713747_135714248
ENSMUSG00000028669.16_135703509_135714575_1	chr4	-	962	6	NNC	ENSMUSG00000028669.16	novel	1700	6	NA	NA	0	-738	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCACTGCAGAAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	135714575	135703508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_135703808_135704459_135704569_135706107_135706206_135713244_135713330_135713702_135713747_135714248
ENSMUSG00000028669.16_135703532_135714575_1	chr4	-	939	6	FSM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	0	761	0	-761	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCCAAGGGATAGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	135714575	135703531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702_135713747_135714248
ENSMUSG00000028670.15_135696075_135698239_1	chr4	-	799	8	NNC	ENSMUSG00000028670.15	novel	793	9	NA	NA	13	35	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGCTGTAGGCGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	135698239	135696074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_135696379_135696454_135696504_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135698154
ENSMUSG00000028670.15_135696075_135698239_2	chr4	-	815	9	FSM	ENSMUSG00000028670.15	ENST00000374503.7	793	9	13	-35	13	35	multi-exon	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGCTGTAGGCGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	135698239	135696074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_135696379_135696454_135696504_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170
ENSMUSG00000028671.17_135691038_135692992_1	chr4	+	301	3	ISM	ENSMUSG00000028671.17	ENSMUST00000102541.10	1430	11	0	2497	0	-2497	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTACTGGGGCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	135691037	135692992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_135691100_135692644_135692768_135692876
ENSMUSG00000028671.17_135694525_135695146_1	chr4	+	271	4	ISM	ENSMUSG00000028671.17	ENSMUST00000102540.2	1537	10	2049	343	2049	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGCTTTGGGGCGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	135694524	135695146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_135694568_135694662_135694741_135694899_135695015_135695111
ENSMUSG00000028671.17_135694947_135695308_1	chr4	+	265	2	ISM	ENSMUSG00000028671.17	ENSMUST00000102540.2	1537	10	2471	181	2471	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCACTGACCAGAAAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	135694946	135695308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_135695015_135695111
ENSMUSG00000028672.14_135673759_135689527_1	chr4	+	1017	9	FSM	ENSMUSG00000028672.14	ENSMUST00000030432.8	1418	9	0	401	0	-401	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCGCCTGAACCAGAACG	NA	NA	NA	NA	NA	NA	NA	NA	135673758	135689527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_135673852_135677860_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
ENSMUSG00000028672.14_135677861_135689635_1	chr4	+	1032	8	ISM	ENSMUSG00000028672.14	ENSMUST00000030432.8	1418	9	4102	293	4102	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGGGCTAGAGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	135677860	135689635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
ENSMUSG00000028672.14_135677909_135689811_1	chr4	+	1160	8	ISM	ENSMUSG00000028672.14	ENSMUST00000030432.8	1418	9	4150	117	4150	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATGGTGGGGGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	135677908	135689811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
ENSMUSG00000028672.14_135681165_135689928_1	chr4	+	1136	6	ISM	ENSMUSG00000028672.14	ENSMUST00000030432.8	1418	9	7406	0	7406	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAACGTGTGTTTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	135681164	135689928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
ENSMUSG00000028673.11_135648046_135667622_1	chr4	+	2520	8	NNC	ENSMUSG00000028673.11	novel	2525	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTTTGTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	135648045	135667622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662187_135664233_135664334_135666384
ENSMUSG00000028673.11_135648046_135667622_2	chr4	+	2519	8	NNC	ENSMUSG00000028673.11	novel	2525	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTTTGTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	135648045	135667622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657310_135660209_135660411_135662000_135662192_135664233_135664334_135666384
ENSMUSG00000028673.11_135648046_135667622_3	chr4	+	2518	8	NNC	ENSMUSG00000028673.11	novel	2525	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTTTGTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	135648045	135667622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_135648462_135650277_135650413_135652859_135652998_135657216_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384
ENSMUSG00000028673.11_135648046_135667622_4	chr4	+	2519	8	NNC	ENSMUSG00000028673.11	novel	2525	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	868	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTTTGTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	135648045	135667622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660215_135660411_135662000_135662192_135664233_135664334_135666384
ENSMUSG00000028675.13_135598951_135600372_1	chr4	-	982	2	FSM	ENSMUSG00000028675.13	ENSMUST00000180300.2	171	2	0	-811	0	-722	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTCTATTCTAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	135600372	135598950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_135599766_135600205
ENSMUSG00000028675.13_135599203_135601161_1	chr4	-	945	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	0	974	0	559	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCAAGTTTAGATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	135601161	135599202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_135599766_135600205_135600411_135600984
ENSMUSG00000028676.18_135583189_135594833_1	chr4	+	1235	6	NNC	ENSMUSG00000028676.18	novel	3754	6	NA	NA	131	-860	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCTCAAATTAAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	135583188	135594833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_135583603_135585615_135585716_135589081_135589189_135590350_135590514_135590833_135590888_135594436
ENSMUSG00000028676.18_135585619_135595155_1	chr4	+	1137	5	NNC	ENSMUSG00000028676.18	novel	2225	6	NA	NA	2561	-538	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACTGGATAATTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	135585618	135595155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_135585716_135589081_135589189_135590350_135590514_135590836_135590888_135594436
ENSMUSG00000028676.18_135585638_135595248_1	chr4	+	1211	5	NNC	ENSMUSG00000028676.18	novel	2225	6	NA	NA	2580	-445	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGTGTATTATGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	135585637	135595248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_135585716_135589081_135589189_135590350_135590514_135590836_135590888_135594436
ENSMUSG00000028676.18_135585640_135595515_1	chr4	+	1476	5	NNC	ENSMUSG00000028676.18	novel	2225	6	NA	NA	2582	-178	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCTGGGTGCTATAATT	NA	NA	NA	NA	NA	NA	NA	NA	135585639	135595515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_135585716_135589081_135589189_135590350_135590514_135590836_135590888_135594436
ENSMUSG00000028676.18_135589099_135595693_1	chr4	+	1561	4	ISM	ENSMUSG00000028676.18	ENSMUST00000102544.9	2225	6	6041	0	6041	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATTCCTTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	135589098	135595693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_135589189_135590350_135590514_135590836_135590888_135594436
ENSMUSG00000028676.18_135590414_135591215_1	chr4	+	327	3	ISM	ENSMUSG00000028676.18	ENSMUST00000097844.9	3055	6	7356	1911	7356	-1911	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAAAAGGAATCAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	135590413	135591215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_135590514_135590836_135590888_135591039
ENSMUSG00000028676.18_135590462_135591276_1	chr4	+	340	3	ISM	ENSMUSG00000028676.18	ENSMUST00000097844.9	3055	6	7404	1850	7404	-1850	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTCTAGGTCAAAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	135590461	135591276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_135590514_135590836_135590888_135591039
ENSMUSG00000028677.20_117128661_117354146_1	chr4	-	2912	14	NNC	ENSMUSG00000028677.20	novel	2929	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	117354146	117128660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117153302_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353875
ENSMUSG00000028677.20_117128661_117354146_2	chr4	-	2924	15	NNC	ENSMUSG00000028677.20	novel	2929	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	117354146	117128660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164871_117346785_117347528_117353875
ENSMUSG00000028677.20_117128661_117354146_3	chr4	-	2928	15	NNC	ENSMUSG00000028677.20	novel	2929	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	117354146	117128660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164871_117346781_117347528_117353875
ENSMUSG00000028677.20_117128661_117354146_4	chr4	-	2921	15	NNC	ENSMUSG00000028677.20	novel	2929	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	117354146	117128660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134947_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353875
ENSMUSG00000028677.20_117128661_117354146_5	chr4	-	2925	15	NNC	ENSMUSG00000028677.20	novel	2929	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	117354146	117128660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164868_117346781_117347528_117353875
ENSMUSG00000028677.20_117128661_117354146_6	chr4	-	2925	15	FSM	ENSMUSG00000028677.20	ENSMUST00000030439.15	3029	15	103	1	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	117354146	117128660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353879
ENSMUSG00000028678.14_117016836_117022449_1	chr4	-	1134	5	ISM	ENSMUSG00000028678.14	ENSMUST00000106436.8	2378	19	13492	-504	13492	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCAGATTCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	117022449	117016835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338
ENSMUSG00000028678.14_117016969_117022607_1	chr4	-	1054	6	ISM	ENSMUSG00000028678.14	ENSMUST00000106436.8	2378	19	13334	-371	13334	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATACTTTCAGAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	117022607	117016968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554
ENSMUSG00000028678.14_117017045_117022649_1	chr4	-	1020	6	ISM	ENSMUSG00000028678.14	ENSMUST00000106436.8	2378	19	13292	-295	13292	-209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAAGAGAGGCGGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	117022649	117017044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554
ENSMUSG00000028678.14_117017096_117022717_1	chr4	-	1037	6	ISM	ENSMUSG00000028678.14	ENSMUST00000106436.8	2378	19	13224	-244	13224	244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCGCTGCGAGGTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	117022717	117017095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554
ENSMUSG00000028678.14_117017485_117024532_1	chr4	-	1031	10	ISM	ENSMUSG00000028678.14	ENSMUST00000106436.8	2378	19	11409	145	11409	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTAAGCAGGCGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	117024532	117017484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490
ENSMUSG00000028678.14_117017550_117024581_1	chr4	-	1015	10	ISM	ENSMUSG00000028678.14	ENSMUST00000106436.8	2378	19	11360	210	11360	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAGATCAGCCAGACTA	NA	NA	NA	NA	NA	NA	NA	NA	117024581	117017549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490
ENSMUSG00000028678.14_117019207_117027194_1	chr4	-	1148	10	ISM	ENSMUSG00000028678.14	ENSMUST00000106436.8	2378	19	8747	1867	8747	-1867	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGAACTGGCTCCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	117027194	117019206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031
ENSMUSG00000028678.14_117019451_117027311_1	chr4	-	1032	10	ISM	ENSMUSG00000028678.14	ENSMUST00000106436.8	2378	19	8630	2111	8630	-2111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGAAGCCAGCTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	117027311	117019450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281
ENSMUSG00000028678.14_117019800_117028964_1	chr4	-	1043	10	ISM	ENSMUSG00000028678.14	ENSMUST00000106436.8	2378	19	6977	2460	6977	-2460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCGGGCCTTCATCGTG	NA	NA	NA	NA	NA	NA	NA	NA	117028964	117019799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913
ENSMUSG00000028678.14_117022339_117029582_1	chr4	-	1121	10	ISM	ENSMUSG00000028678.14	ENSMUST00000106436.8	2378	19	6359	4999	6359	-4999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGGGGCTTTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	117029582	117022338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481
ENSMUSG00000028678.14_117022554_117030918_1	chr4	-	1131	10	ISM	ENSMUSG00000028678.14	ENSMUST00000106436.8	2378	19	5023	5214	5023	-5214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCAGGCCGGTGCTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	117030918	117022553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798
ENSMUSG00000028678.14_117022674_117032134_1	chr4	-	1063	11	ISM	ENSMUSG00000028678.14	ENSMUST00000106436.8	2378	19	3807	5334	3807	-5334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAAATTCTCTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	117032134	117022673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082
ENSMUSG00000028678.14_117023610_117035402_1	chr4	-	1057	12	ISM	ENSMUSG00000028678.14	ENSMUST00000106436.8	2378	19	539	6270	539	-6270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACAGCAGGCAGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	117035402	117023609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341
ENSMUSG00000028678.14_117024522_117039739_1	chr4	-	1076	11	ISM	ENSMUSG00000028678.14	ENSMUST00000065896.9	2842	20	97	7686	97	-7182	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGGACAGACAGGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	117039739	117024521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ENSMUSG00000028680.15_116985852_116987259_1	chr4	-	741	3	ISM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	3901	0	3901	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGGCCTTATCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	116987259	116985851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116986376_116986482_116986597_116987156
ENSMUSG00000028680.15_116985965_116987501_1	chr4	-	717	4	ISM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	3659	113	3659	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTAGGGGGCATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	116987501	116985964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439
ENSMUSG00000028680.15_116986307_116988316_1	chr4	-	712	7	ISM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	2844	455	2844	-455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGCAATCGCAGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	116988316	116986306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258
ENSMUSG00000028680.15_116986539_116988651_1	chr4	-	703	7	ISM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	2509	687	2509	-687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTCAAGACTGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	116988651	116986538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569
ENSMUSG00000028680.15_116987215_116988898_1	chr4	-	724	7	ISM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	2262	1363	2262	-1363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGCTGGGCATCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	116988898	116987214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806
ENSMUSG00000028680.15_116987527_116989172_1	chr4	-	747	7	ISM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	1988	1675	1988	-1675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCTTTGGCTATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	116989172	116987526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097
ENSMUSG00000028680.15_116987710_116989980_1	chr4	-	744	7	ISM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	1180	1858	1180	-1858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTAAGGCTGGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	116989980	116987709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923
ENSMUSG00000028680.15_116987956_116990179_1	chr4	-	739	7	ISM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	981	2104	981	-2104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCCCCGTGGGACACTGG	NA	NA	NA	NA	NA	NA	NA	NA	116990179	116987955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101
ENSMUSG00000028680.15_116988654_116990628_1	chr4	-	710	7	ISM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	532	2802	532	-2802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGATCTGACACCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	116990628	116988653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591
ENSMUSG00000028680.15_116988867_116990889_1	chr4	-	719	7	ISM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	271	3015	271	-3015	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCACCCAGAGACCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	116990889	116988866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
ENSMUSG00000028680.15_116988920_116990996_1	chr4	-	773	7	ISM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	164	3068	164	-3068	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCCAGCCTCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	116990996	116988919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
ENSMUSG00000028683.15_116876599_116916050_1	chr4	+	741	6	ISM	ENSMUSG00000028683.15	ENSMUST00000106447.9	3754	10	-6	14407	0	-14407	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGAGGAGGAAGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	116876598	116916050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960
ENSMUSG00000028683.15_116879352_116922623_1	chr4	+	752	6	ISM	ENSMUSG00000028683.15	ENSMUST00000106447.9	3754	10	2747	7834	0	-7834	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGAAGAGGATCTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	116879351	116922623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537
ENSMUSG00000028683.15_116885606_116923594_1	chr4	+	662	6	ISM	ENSMUSG00000028683.15	ENSMUST00000106447.9	3754	10	9001	6863	6254	-6863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACACTCTGACCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	116885605	116923594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570
ENSMUSG00000028683.15_116885657_116923645_1	chr4	+	662	6	ISM	ENSMUSG00000028683.15	ENSMUST00000106447.9	3754	10	9052	6812	6305	-6812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACAAATGGGAAGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	116885656	116923645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570
ENSMUSG00000028683.15_116885704_116923701_1	chr4	+	671	6	ISM	ENSMUSG00000028683.15	ENSMUST00000106447.9	3754	10	9099	6756	6352	-6756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGGACTTTGCTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	116885703	116923701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570
ENSMUSG00000028683.15_116901673_116927860_1	chr4	+	744	7	ISM	ENSMUSG00000028683.15	ENSMUST00000106447.9	3754	10	25068	2597	22321	-2597	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATACACAAATTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	116901672	116927860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835
ENSMUSG00000028683.15_116909918_116927984_1	chr4	+	751	6	ISM	ENSMUSG00000028683.15	ENSMUST00000106447.9	3754	10	33313	2473	30566	-2473	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTCTCCCTCTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	116909917	116927984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835
ENSMUSG00000028683.15_116915961_116938864_1	chr4	+	746	6	ISM	ENSMUSG00000028683.15	ENSMUST00000106448.9	1555	12	39362	5185	36609	-5178	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACCCCAAGTTAGGATTC	NA	NA	NA	NA	NA	NA	NA	NA	116915960	116938864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754
ENSMUSG00000028683.15_116922535_116943926_1	chr4	+	694	6	ISM	ENSMUSG00000028683.15	ENSMUST00000106448.9	1555	12	45936	123	43183	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAAATCTGAACCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	116922534	116943926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
ENSMUSG00000028683.15_116923668_116944049_1	chr4	+	589	5	ISM	ENSMUSG00000028683.15	ENSMUST00000106448.9	1555	12	47069	0	44316	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCAGTGGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	116923667	116944049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
ENSMUSG00000028684.15_116847162_116848955_1	chr4	-	790	4	ISM	ENSMUSG00000028684.15	ENST00000652287.1	1080	8	1930	-254	1930	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCGGCTCCTTTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	116848955	116847161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817
ENSMUSG00000028684.15_116847414_116850666_1	chr4	-	978	7	NNC	ENSMUSG00000028684.15	novel	1080	8	NA	NA	219	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAGCATGTTCTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	116850666	116847413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850586
ENSMUSG00000028684.15_116847414_116850839_1	chr4	-	1027	8	NNC	ENSMUSG00000028684.15	novel	1080	8	NA	NA	46	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAGCATGTTCTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	116850839	116847413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848947_116849760_116849923_116850022_116850221_116850584_116850665_116850781
ENSMUSG00000028684.15_116847414_116850839_2	chr4	-	1028	8	NNC	ENSMUSG00000028684.15	novel	1080	8	NA	NA	46	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1982	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAGCATGTTCTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	116850839	116847413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850030_116850221_116850584_116850665_116850781
ENSMUSG00000028684.15_116847414_116850839_3	chr4	-	1028	8	NNC	ENSMUSG00000028684.15	novel	1080	8	NA	NA	46	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAGCATGTTCTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	116850839	116847413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849768_116849923_116850022_116850221_116850584_116850665_116850781
ENSMUSG00000028684.15_116847414_116850839_4	chr4	-	1036	8	FSM	ENSMUSG00000028684.15	ENST00000652287.1	1080	8	46	-2	46	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAGCATGTTCTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	116850839	116847413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850584_116850665_116850781
ENSMUSG00000028684.15_116847482_116850497_1	chr4	-	816	6	ISM	ENSMUSG00000028684.15	ENST00000636836.1	1076	8	388	66	388	-66	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCTTTCTGCTCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	116850497	116847481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116847646_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444
ENSMUSG00000028684.15_116847610_116850634_1	chr4	-	748	7	ISM	ENSMUSG00000028684.15	ENST00000636836.1	1076	8	251	194	251	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGGGCCTCAACGCTA	NA	NA	NA	NA	NA	NA	NA	NA	116850634	116847609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116847646_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584
ENSMUSG00000028684.15_116848428_116850507_1	chr4	-	730	6	ISM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	1103	1266	378	-1012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATTGGGTCCAACATA	NA	NA	NA	NA	NA	NA	NA	NA	116850507	116848427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444
ENSMUSG00000028684.15_116848428_116850664_1	chr4	-	810	7	ISM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	946	1266	221	-1012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATTGGGTCCAACATA	NA	NA	NA	NA	NA	NA	NA	NA	116850664	116848427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584
ENSMUSG00000028684.15_116848658_116850839_1	chr4	-	732	7	ISM	ENSMUSG00000028684.15	ENST00000636836.1	1076	8	46	1242	46	-1242	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGCTGGCCCAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	116850839	116848657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781
ENSMUSG00000028684.15_116848939_116851589_1	chr4	-	695	7	ISM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	21	1777	21	-1523	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCACGCAGGACATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	116851589	116848938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
ENSMUSG00000028687.18_116672763_116674395_1	chr4	+	733	8	ISM	ENSMUSG00000028687.18	ENST00000528013.6	1255	11	6	840	3	-840	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTTGCCAGGCCGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	116672762	116674395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116672932_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376
ENSMUSG00000028687.18_116672866_116674642_1	chr4	+	728	9	ISM	ENSMUSG00000028687.18	ENST00000528013.6	1255	11	109	593	106	-593	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGGCCAACTTTCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	116672865	116674642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116672932_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580
ENSMUSG00000028687.18_116673159_116674772_1	chr4	+	792	8	ISM	ENSMUSG00000028687.18	ENST00000528013.6	1255	11	402	463	399	-463	internal_fragment	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCAGATATTGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	116673158	116674772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580
ENSMUSG00000028687.18_116673631_116676580_1	chr4	+	530	5	NNC	ENSMUSG00000028687.18	novel	581	5	NA	NA	-1	-48	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	871	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGATTCCCTACCCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	116673630	116676580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_116673705_116674865_116675003_116675084_116675233_116675437_116675480_116676451
ENSMUSG00000028687.18_116673631_116676580_3	chr4	+	532	5	FSM	ENSMUSG00000028687.18	ENST00000488731.6	581	5	-1	50	-1	-48	multi-exon	FALSE	canonical	NA	NA	NA	NA	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGATTCCCTACCCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	116673630	116676580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_116673705_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ENSMUSG00000028687.18_116673847_116675124_1	chr4	+	714	7	ISM	ENSMUSG00000028687.18	ENST00000528013.6	1255	11	1090	111	215	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGTCTGGCTCTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	116673846	116675124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084
ENSMUSG00000028687.18_116673972_116675234_1	chr4	+	780	6	ISM	ENSMUSG00000028687.18	ENST00000528013.6	1255	11	1215	1	340	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCACCTTTGTTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	116673971	116675234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084
ENSMUSG00000028687.18_116674376_116676580_1	chr4	+	706	6	ISM	ENSMUSG00000028687.18	ENST00000372104.5	1472	13	1616	50	744	-48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGATTCCCTACCCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	116674375	116676580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ENSMUSG00000028687.18_116674895_116676630_2	chr4	+	473	4	NNC	ENSMUSG00000028687.18	novel	581	5	NA	NA	1263	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGAGAACTTTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	116674894	116676630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_116675003_116675084_116675229_116675437_116675480_116676451
ENSMUSG00000028688.14_116661199_116662389_1	chr4	-	1115	2	ISM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	2448	0	2356	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	NA	NA	NA	NA	NA	NA	NA	NA	116662389	116661198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116662253_116662328
ENSMUSG00000028688.14_116661209_116662492_1	chr4	-	1208	2	ISM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	2345	10	2253	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACTTCATTCTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	116662492	116661208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116662253_116662328
ENSMUSG00000028688.14_116661366_116662802_1	chr4	-	1170	3	ISM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	2035	167	1943	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACTACTTCAGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	116662802	116661365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116662253_116662328_116662492_116662682
ENSMUSG00000028688.14_116661412_116662835_1	chr4	-	1157	3	ISM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	2002	213	1910	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCACATTTAACTGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	116662835	116661411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116662253_116662328_116662492_116662682
ENSMUSG00000028688.14_116661636_116663301_1	chr4	-	1160	4	ISM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	1536	437	1444	-437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTCCAACATCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	116663301	116661635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181
ENSMUSG00000028688.14_116661871_116663956_1	chr4	-	1245	7	ISM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	881	672	789	-672	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGGGACGGACTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	116663956	116661870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813
ENSMUSG00000028688.14_116661979_116664745_1	chr4	-	1218	8	FSM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	92	780	0	-780	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGGTCACACAAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	116664745	116661978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
ENSMUSG00000028690.5_116560393_116561747_1	chr4	-	716	2	ISM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	3856	917	3856	-917	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGGTCAAGATAAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	116561747	116560392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116561065_116561703
ENSMUSG00000028690.5_116560448_116561819_1	chr4	-	733	2	ISM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	3784	972	3784	-972	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGGTAGGATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	116561819	116560447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116561065_116561703
ENSMUSG00000028690.5_116560688_116563254_1	chr4	-	707	3	ISM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	2349	1212	2349	-1212	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTCACCACCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	116563254	116560687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116561065_116561703_116561857_116563077
ENSMUSG00000028690.5_116560801_116565485_1	chr4	-	663	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	118	1325	118	-1325	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTATTAGGCTTAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	116565485	116560800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
ENSMUSG00000028691.13_116542741_116549051_1	chr4	+	313	3	ISM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	0	8968	0	-7418	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCGATGAATTTAAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	116542740	116549051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116542858_116544603_116544721_116548972
ENSMUSG00000028691.13_116549035_116551039_1	chr4	+	341	3	ISM	ENSMUSG00000028691.13	ENSMUST00000106470.8	877	6	5951	5430	5951	-5430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGTAAGTCATCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	116549034	116551039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116549127_116550079_116550203_116550913
ENSMUSG00000028691.13_116549096_116556383_1	chr4	+	301	4	ISM	ENSMUSG00000028691.13	ENSMUST00000106470.8	877	6	6012	86	6012	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCTGGCAGTGATACCA	NA	NA	NA	NA	NA	NA	NA	NA	116549095	116556383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116549127_116550079_116550203_116550913_116551045_116556367
ENSMUSG00000028691.13_116550079_116556469_1	chr4	+	357	3	ISM	ENSMUSG00000028691.13	ENSMUST00000106470.8	877	6	6995	0	6995	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1403	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCAGGCAGCATTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	116550078	116556469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116550203_116550913_116551045_116556367
ENSMUSG00000028692.15_116493707_116508877_1	chr4	-	1413	9	NNC	ENSMUSG00000028692.15	novel	1420	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTGTGCCTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	116508877	116493706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499168_116502700_116502791_116508535
ENSMUSG00000028692.15_116493707_116508877_2	chr4	-	1415	9	NNC	ENSMUSG00000028692.15	novel	1420	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTGTGCCTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	116508877	116493706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502705_116502791_116508535
ENSMUSG00000028692.15_116493707_116508877_3	chr4	-	1411	9	NNC	ENSMUSG00000028692.15	novel	1420	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5059	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTGTGCCTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	116508877	116493706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497015_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
ENSMUSG00000028692.15_116493707_116508877_4	chr4	-	1413	9	NNC	ENSMUSG00000028692.15	novel	1420	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTGTGCCTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	116508877	116493706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_116493867_116494958_116495046_116495172_116495239_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
ENSMUSG00000028693.16_116458958_116460123_1	chr4	-	279	4	ISM	ENSMUSG00000028693.16	ENSMUST00000081182.5	1461	13	24552	152	24552	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACCGTGGAGTCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	116460123	116458957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084
ENSMUSG00000028693.16_116459346_116461156_1	chr4	-	272	4	ISM	ENSMUSG00000028693.16	ENSMUST00000081182.5	1461	13	23519	540	23519	-540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGGGGATGCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	116461156	116459345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116459418_116459922_116460001_116460084_116460142_116461091
ENSMUSG00000028693.16_116461241_116461980_1	chr4	-	250	3	ISM	ENSMUSG00000028693.16	ENSMUST00000081182.5	1461	13	22695	2435	22695	-2435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGAGGCCGAAGGATCG	NA	NA	NA	NA	NA	NA	NA	NA	116461980	116461240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116461259_116461359_116461549_116461937
ENSMUSG00000028693.16_116462158_116471543_1	chr4	-	241	4	ISM	ENSMUSG00000028693.16	ENSMUST00000030457.12	2118	14	13151	3909	13132	-3352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAACTTGCCTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	116471543	116462157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116462192_116462880_116462961_116469168_116469279_116471526
ENSMUSG00000028693.16_116462919_116476100_1	chr4	-	267	4	ISM	ENSMUSG00000028693.16	ENSMUST00000030457.12	2118	14	8594	4670	8575	-4113	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAAGAAACACCAAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	116476100	116462918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116462961_116469168_116469279_116471526_116471608_116476066
ENSMUSG00000028693.16_116469230_116480003_1	chr4	-	281	4	ISM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	5135	10424	4672	-10424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAAGAAGGAGAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	116480003	116469229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116469279_116471526_116471608_116476066_116476178_116479963
ENSMUSG00000028700.15_115994553_116009089_1	chr4	+	716	3	ISM	ENSMUSG00000028700.15	ENST00000371992.1	2877	23	78	7956	78	-7545	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCGAGGCCAATGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	115994552	116009089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115995026_116008270_116008441_116009016
ENSMUSG00000028700.15_115994717_116010173_1	chr4	+	893	6	ISM	ENSMUSG00000028700.15	ENST00000371992.1	2877	23	242	6872	-235	-6461	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGAGGCCCCCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	115994716	116010173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115995026_116008270_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059
ENSMUSG00000028700.15_115994844_116010770_1	chr4	+	789	7	ISM	ENSMUSG00000028700.15	ENST00000371992.1	2877	23	369	6275	-108	-5864	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACAGCAAAGGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	115994843	116010770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115995026_116008270_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747
ENSMUSG00000028700.15_115994952_116011137_1	chr4	+	757	7	ISM	ENSMUSG00000028700.15	ENST00000396420.7	3422	19	477	5909	0	-5497	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTTAGTGTGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	115994951	116011137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115995026_116008270_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116011038
ENSMUSG00000028700.15_116007715_116016489_1	chr4	+	2167	22	FSM	ENSMUSG00000028700.15	ENSMUST00000106498.8	2719	22	0	552	0	-145	multi-exon	TRUE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTACTGTGTACCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	116007714	116016489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ENSMUSG00000028700.15_116008262_116016634_1	chr4	+	2212	21	ISM	ENSMUSG00000028700.15	ENSMUST00000106498.8	2719	22	547	407	-366	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCTGAGTTTAAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	116008261	116016634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ENSMUSG00000028700.15_116008310_116011362_1	chr4	+	718	7	ISM	ENSMUSG00000028700.15	ENST00000396420.7	3422	19	13835	5684	-318	-5272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGCGTGTGCAGCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	116008309	116011362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116011038_116011138_116011288
ENSMUSG00000028700.15_116009026_116011839_1	chr4	+	733	7	ISM	ENSMUSG00000028700.15	ENST00000396420.7	3422	19	14551	5207	398	-4795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGGGTGCTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	116009025	116011839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116011038_116011138_116011288_116011417_116011738
ENSMUSG00000028700.15_116009059_116016794_1	chr4	+	2151	20	ISM	ENSMUSG00000028700.15	ENSMUST00000106494.3	2226	21	431	-160	431	160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAATAGGCCCAACCCGG	NA	NA	NA	NA	NA	NA	NA	NA	116009058	116016794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ENSMUSG00000028700.15_116009089_116016879_1	chr4	+	2206	20	ISM	ENSMUSG00000028700.15	ENSMUST00000106494.3	2226	21	461	-245	461	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGCCCAACTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	116009088	116016879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ENSMUSG00000028700.15_116009095_116011875_1	chr4	+	700	7	ISM	ENSMUSG00000028700.15	ENST00000396420.7	3422	19	14620	5171	467	-4759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGACTTCTTGTACGAGG	NA	NA	NA	NA	NA	NA	NA	NA	116009094	116011875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116011038_116011138_116011288_116011417_116011738
ENSMUSG00000028700.15_116009353_116012008_1	chr4	+	717	6	ISM	ENSMUSG00000028700.15	ENST00000396420.7	3422	19	14878	5038	725	-4626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCCTGGGCTCCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	116009352	116012008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116009393_116009905_116009972_116010059_116010174_116011038_116011138_116011288_116011417_116011738
ENSMUSG00000028700.15_116009355_116017041_1	chr4	+	2244	19	ISM	ENSMUSG00000028700.15	ENSMUST00000106494.3	2226	21	727	-407	727	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	NA	NA	NA	NA	NA	NA	NA	116009354	116017041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ENSMUSG00000028700.15_116010150_116012187_1	chr4	+	700	4	ISM	ENSMUSG00000028700.15	ENST00000396420.7	3422	19	15675	4859	1522	-4447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGCTTGACATGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	116010149	116012187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116010174_116011038_116011138_116011288_116011417_116011738
ENSMUSG00000028700.15_116011287_116012467_1	chr4	+	777	3	ISM	ENSMUSG00000028700.15	ENST00000396420.7	3422	19	16812	4579	2659	-4167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTACCACTGATACAAT	NA	NA	NA	NA	NA	NA	NA	NA	116011286	116012467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116011417_116011738_116012344_116012425
ENSMUSG00000028700.15_116011390_116012705_1	chr4	+	723	4	ISM	ENSMUSG00000028700.15	ENST00000396420.7	3422	19	16915	4341	2762	-3929	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCAGGTGACCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	116011389	116012705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116011417_116011738_116012344_116012425_116012468_116012656
ENSMUSG00000028700.15_116011792_116013127_1	chr4	+	771	5	ISM	ENSMUSG00000028700.15	ENST00000396420.7	3422	19	17317	3919	3164	-3507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACCATGCCTGGGCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	116011791	116013127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082
ENSMUSG00000028700.15_116011949_116013315_1	chr4	+	721	6	ISM	ENSMUSG00000028700.15	ENST00000396420.7	3422	19	17474	3731	3321	-3319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGATGCCGGAACAGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	116011948	116013315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292
ENSMUSG00000028700.15_116012014_116013356_1	chr4	+	697	6	ISM	ENSMUSG00000028700.15	ENST00000396420.7	3422	19	17539	3690	3386	-3278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGATGTTTCCCGATCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	116012013	116013356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292
ENSMUSG00000028700.15_116013146_116016924_1	chr4	+	808	8	ISM	ENSMUSG00000028700.15	ENST00000371992.1	2877	23	18671	121	4518	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAGACTCACACAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	116013145	116016924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016264_116016376_116016493_116016754
ENSMUSG00000028700.15_116013291_116017041_1	chr4	+	861	7	ISM	ENSMUSG00000028700.15	ENST00000371992.1	2877	23	18816	4	4663	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	NA	NA	NA	NA	NA	NA	NA	116013290	116017041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016264_116016376_116016493_116016754
ENSMUSG00000028700.15_116016210_116017041_1	chr4	+	745	2	ISM	ENSMUSG00000028700.15	ENSMUST00000106494.3	2226	21	7582	-407	7582	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	NA	NA	NA	NA	NA	NA	NA	116016209	116017041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116016290_116016376
ENSMUSG00000028703.15_115946679_115950202_1	chr4	+	222	2	ISM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	14213	4038	14213	-4038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGAGCCTTGCCCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	115946678	115950202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115946767_115950068
ENSMUSG00000028703.15_115950169_115952186_1	chr4	+	274	2	ISM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	17703	2054	17703	-2054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCTTTGCCTCGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	115950168	115952186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115950330_115952073
ENSMUSG00000028703.15_115950285_115952373_1	chr4	+	254	3	ISM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	17819	1867	17819	-1867	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGACTGTCAGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	115950284	115952373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115950330_115952073_115952239_115952329
ENSMUSG00000028703.15_115952987_115953543_1	chr4	+	225	3	ISM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	20521	697	20521	-697	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGGAGTTTGCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	115952986	115953543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115953112_115953339_115953416_115953519
ENSMUSG00000028703.15_115953080_115953683_1	chr4	+	272	3	ISM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	20614	557	20614	-557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCGACTCATGGGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	115953079	115953683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115953112_115953339_115953416_115953519
ENSMUSG00000028706.15_115890896_115893070_1	chr4	-	735	2	ISM	ENSMUSG00000028706.15	ENSMUST00000165493.8	3920	6	17507	-208	17507	208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTATTATGTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	115893070	115890895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_115891509_115892948
ENSMUSG00000028706.15_115891104_115901969_1	chr4	-	779	4	ISM	ENSMUSG00000028706.15	ENSMUST00000165493.8	3920	6	8608	0	8608	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCCAGCTCTGGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	115901969	115891103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881
ENSMUSG00000028706.15_115891104_115902020_1	chr4	-	830	4	ISM	ENSMUSG00000028706.15	ENSMUST00000165493.8	3920	6	8557	0	8557	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCCAGCTCTGGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	115902020	115891103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881
ENSMUSG00000028706.15_115891327_115905687_1	chr4	-	784	5	ISM	ENSMUSG00000028706.15	ENSMUST00000165493.8	3920	6	4890	223	4890	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCCATCCTGCCAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	115905687	115891326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526
ENSMUSG00000028706.15_115893010_115905852_1	chr4	-	706	4	ISM	ENSMUSG00000028706.15	ENSMUST00000165493.8	3920	6	4725	1906	4725	-1906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGCGGTCAAGGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	115905852	115893009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_115893074_115897265_115897427_115901881_115902037_115905526
ENSMUSG00000028706.15_115897266_115910956_1	chr4	-	727	4	ISM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	117	7227	117	-6162	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGACCTCTGACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	115910956	115897265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_115897427_115901881_115902037_115905526_115905862_115910880
ENSMUSG00000028708.17_115705421_115731914_1	chr4	+	848	9	ISM	ENSMUSG00000028708.17	ENSMUST00000106513.10	2552	14	8991	4533	8991	-4533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCTCTACATCATGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	115705420	115731914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816
ENSMUSG00000028708.17_115714229_115732656_1	chr4	+	885	9	ISM	ENSMUSG00000028708.17	ENSMUST00000106513.10	2552	14	17799	3791	17799	-3791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCTCATCTCTAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	115714228	115732656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577
ENSMUSG00000028708.17_115720177_115735209_1	chr4	+	875	9	ISM	ENSMUSG00000028708.17	ENSMUST00000106513.10	2552	14	23747	1238	23747	-1238	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAGCATGAGGAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	115720176	115735209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ENSMUSG00000028708.17_115723731_115735439_1	chr4	+	882	7	ISM	ENSMUSG00000028708.17	ENSMUST00000106513.10	2552	14	27301	1008	27301	-1008	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAAGTGTGAAGTAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	115723730	115735439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ENSMUSG00000028708.17_115731817_115735649_1	chr4	+	907	4	ISM	ENSMUSG00000028708.17	ENSMUST00000106513.10	2552	14	35387	798	35387	-798	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTGCTGATGTGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	115731816	115735649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115732012_115732577_115732743_115733777_115733822_115735146
ENSMUSG00000028708.17_115733778_115735959_1	chr4	+	857	2	ISM	ENSMUSG00000028708.17	ENSMUST00000106513.10	2552	14	37348	488	37348	-488	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCCTCTTCCATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	115733777	115735959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115733822_115735146
ENSMUSG00000028718.17_114857379_114863977_1	chr4	+	389	4	ISM	ENSMUSG00000028718.17	ENST00000371877.8	3983	17	22	35184	22	-35184	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGTGGATGAAGGTAATA	NA	NA	NA	NA	NA	NA	NA	NA	114857378	114863977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_114857476_114860044_114860130_114862069_114862178_114863878
ENSMUSG00000028718.17_114889838_114895728_1	chr4	+	425	2	ISM	ENSMUSG00000028718.17	ENST00000371877.8	3983	17	32481	3433	32481	-3433	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAGACCATTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	114889837	114895728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_114890069_114895534
ENSMUSG00000028718.17_114889962_114896374_1	chr4	+	410	3	ISM	ENSMUSG00000028718.17	ENST00000371877.8	3983	17	32605	2787	32605	-2787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAAAAAAGACACAATT	NA	NA	NA	NA	NA	NA	NA	NA	114889961	114896374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_114890069_114895534_114895728_114896264
ENSMUSG00000028718.17_114896335_114898591_1	chr4	+	402	2	ISM	ENSMUSG00000028718.17	ENST00000371877.8	3983	17	38978	570	38978	-570	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGACAGGAGTACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	114896334	114898591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_114896516_114898370
ENSMUSG00000028719.9_114818380_114820274_1	chr4	-	586	2	ISM	ENSMUSG00000028719.9	ENST00000450808.2	922	5	24065	-155	24065	155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTGAAAGTTAAAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	114820274	114818379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_114818953_114820261
ENSMUSG00000028719.9_114818598_114822148_1	chr4	-	598	4	ISM	ENSMUSG00000028719.9	ENST00000450808.2	922	5	22191	63	22191	-63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCATGTATATCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	114822148	114818597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079
ENSMUSG00000028719.9_114818759_114826466_1	chr4	-	573	5	ISM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	17972	2226	17873	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTGTGGTCACAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	114826466	114818758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414
ENSMUSG00000028719.9_114818900_114844269_1	chr4	-	634	6	FSM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	169	2367	70	-365	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATCTTTGAAATCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	114844269	114818899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114844162
ENSMUSG00000028729.16_118477996_118482882_1	chr4	+	944	9	NNC	ENSMUSG00000028729.16	novel	1012	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAGGGGTCCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	118477995	118482882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_118478068_118478120_118478195_118478284_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719
ENSMUSG00000028729.16_118477996_118482882_2	chr4	+	948	9	NNC	ENSMUSG00000028729.16	novel	1012	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	967	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAGGGGTCCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	118477995	118482882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_118478068_118478120_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480809_118480884_118481331_118481426_118482719
ENSMUSG00000028729.16_118477996_118482882_3	chr4	+	943	9	NNC	ENSMUSG00000028729.16	novel	1012	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAGGGGTCCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	118477995	118482882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_118478061_118478120_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719
ENSMUSG00000028729.16_118477996_118482882_4	chr4	+	942	9	NNC	ENSMUSG00000028729.16	novel	1012	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAGGGGTCCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	118477995	118482882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_118478068_118478128_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719
ENSMUSG00000028729.16_118477996_118482882_5	chr4	+	950	9	FSM	ENSMUSG00000028729.16	ENST00000431635.6	1012	9	62	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAGGGGTCCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	118477995	118482882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_118478068_118478120_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719
ENSMUSG00000028729.16_118478047_118483428_1	chr4	+	1364	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	51	1545	51	546	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGGCCATGCCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	118478046	118483428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ENSMUSG00000028729.16_118478047_118483480_1	chr4	+	1416	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	51	1493	51	598	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTCGTCTCCCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	118478046	118483480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ENSMUSG00000028729.16_118478047_118483529_1	chr4	+	1465	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	51	1444	51	647	multi-exon	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGGCAGGTTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	118478046	118483529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ENSMUSG00000028729.16_118478582_118483716_1	chr4	+	1396	7	ISM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	586	1257	586	834	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAAAGCGACTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	118478581	118483716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ENSMUSG00000028729.16_118478653_118483747_1	chr4	+	1356	7	ISM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	657	1226	657	865	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGGCTTAAGATGCGA	NA	NA	NA	NA	NA	NA	NA	NA	118478652	118483747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ENSMUSG00000028729.16_118479306_118483875_1	chr4	+	1367	6	ISM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	1310	1098	1310	993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTTTCTGGGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	118479305	118483875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ENSMUSG00000028729.16_118479338_118483949_1	chr4	+	1409	6	ISM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	1342	1024	1342	-1024	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCAAGACAGGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	118479337	118483949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ENSMUSG00000028729.16_118480567_118484064_1	chr4	+	1399	5	ISM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	2571	909	2571	-909	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATTAAAGCTGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	118480566	118484064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ENSMUSG00000028737.16_139362778_139375550_1	chr4	+	1286	11	ISM	ENSMUSG00000028737.16	ENSMUST00000039818.10	3382	15	12601	1451	1745	-35	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGACTGGCGATACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	139362777	139375550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
ENSMUSG00000028741.14_139074746_139075310_1	chr4	-	450	2	ISM	ENSMUSG00000028741.14	ENSMUST00000102503.10	1221	8	4577	0	4299	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTTGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	139075310	139074745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_139075117_139075231
ENSMUSG00000028741.14_139075042_139076960_1	chr4	-	487	6	ISM	ENSMUSG00000028741.14	ENSMUST00000030513.13	930	8	2649	286	2649	-286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGATGGACGATGACCT	NA	NA	NA	NA	NA	NA	NA	NA	139076960	139075041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_139075114_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924
ENSMUSG00000028741.14_139075232_139077805_1	chr4	-	542	6	ISM	ENSMUSG00000028741.14	ENSMUST00000030513.13	930	8	1804	476	1804	-476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTGGGCCTGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	139077805	139075231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077029_139077746
ENSMUSG00000028741.14_139075630_139079609_1	chr4	-	497	6	ISM	ENSMUSG00000028741.14	ENSMUST00000030513.13	930	8	0	874	0	-874	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGCTGGAGAGGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	139079609	139075629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_139075784_139075992_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
ENSMUSG00000028741.14_139075743_139079715_1	chr4	-	490	6	ISM	ENSMUSG00000028741.14	ENSMUST00000030513.13	930	8	-106	987	-106	-987	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACAAAGCAACTCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	139079715	139075742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_139075784_139075992_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
ENSMUSG00000028741.14_139076009_139079844_1	chr4	-	562	5	ISM	ENSMUSG00000028741.14	ENSMUST00000102503.10	1221	8	43	1263	43	-1253	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGGTGAATGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	139079844	139076008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
ENSMUSG00000028743.8_139038055_139045010_1	chr4	+	953	6	ISM	ENSMUSG00000028743.8	ENSMUST00000073787.7	1288	7	0	727	0	-727	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCCAGGCCCCTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	139038054	139045010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_139038388_139041414_139041603_139041777_139041883_139044020_139044118_139044244_139044345_139044880
ENSMUSG00000028743.8_139038242_139045564_1	chr4	+	928	7	FSM	ENSMUSG00000028743.8	ENSMUST00000073787.7	1288	7	187	173	187	-173	multi-exon	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGTGGCTCAAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	139038241	139045564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_139038388_139041414_139041603_139041777_139041883_139044020_139044118_139044244_139044345_139044880_139045011_139045402
ENSMUSG00000028743.8_139041413_139045737_1	chr4	+	957	6	ISM	ENSMUSG00000028743.8	ENSMUST00000073787.7	1288	7	3358	0	3358	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGTCTCCTCTGCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	139041412	139045737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_139041603_139041777_139041883_139044020_139044118_139044244_139044345_139044880_139045011_139045402
ENSMUSG00000028744.16_139025841_139033850_1	chr4	-	1177	7	ISM	ENSMUSG00000028744.16	ENSMUST00000172747.8	1405	9	4126	0	4126	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGCCTGTTTCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	139033850	139025840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753
ENSMUSG00000028744.16_139025958_139033872_1	chr4	-	1082	7	ISM	ENSMUSG00000028744.16	ENSMUST00000172747.8	1405	9	4104	117	4104	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGGTCACCTCCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	139033872	139025957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753
ENSMUSG00000028744.16_139026103_139035072_1	chr4	-	1099	8	ISM	ENSMUSG00000028744.16	ENSMUST00000053862.12	1532	9	2947	264	2904	-262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTCTGGGCCTGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	139035072	139026102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139034002_139035039
ENSMUSG00000028744.16_139026220_139037996_1	chr4	-	1128	9	FSM	ENSMUSG00000028744.16	ENSMUST00000053862.12	1532	9	23	381	-7	-379	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTCCCCAGCTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	139037996	139026219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139034002_139035039_139035162_139037939
ENSMUSG00000028745.19_138920210_139019129_1	chr4	+	1668	9	NNC	ENSMUSG00000028745.19	novel	1674	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGCGCTGGCTGTACGTTC	NA	NA	NA	NA	NA	NA	NA	NA	138920209	139019129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014400_139015066_139015144_139018313
ENSMUSG00000028745.19_138920210_139019129_2	chr4	+	1666	9	NNC	ENSMUSG00000028745.19	novel	1674	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6731	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGCGCTGGCTGTACGTTC	NA	NA	NA	NA	NA	NA	NA	NA	138920209	139019129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_138920340_138966219_138966310_138984579_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
ENSMUSG00000028745.19_138920210_139019129_3	chr4	+	1668	9	NNC	ENSMUSG00000028745.19	novel	1674	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6868	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGCGCTGGCTGTACGTTC	NA	NA	NA	NA	NA	NA	NA	NA	138920209	139019129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014345_139014406_139015066_139015144_139018313
ENSMUSG00000028745.19_138920280_139019129_1	chr4	+	1598	9	NNC	ENSMUSG00000028745.19	novel	1674	9	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGCGCTGGCTGTACGTTC	NA	NA	NA	NA	NA	NA	NA	NA	138920279	139019129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007443_139007778_139007896_139014339_139014406_139015066_139015144_139018313
ENSMUSG00000028745.19_138966237_139018886_1	chr4	+	1397	9	ISM	ENSMUSG00000028745.19	ENSMUST00000102507.10	1702	10	46002	183	5543	135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTCCCAAGGAGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	138966236	139018886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139016171_139016285_139018313
ENSMUSG00000028745.19_138984600_139019069_1	chr4	+	1479	8	ISM	ENSMUSG00000028745.19	ENSMUST00000102507.10	1702	10	64365	0	23906	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	138984599	139019069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139016171_139016285_139018313
ENSMUSG00000028756.13_138040720_138045236_1	chr4	-	1364	5	ISM	ENSMUSG00000028756.13	ENSMUST00000030536.13	2375	8	8382	-3	-1499	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTACACTGGAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	138045236	138040719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_138041525_138042807_138043045_138043314_138043443_138044615_138044780_138045206
ENSMUSG00000028756.13_138040870_138045289_1	chr4	-	1267	5	ISM	ENSMUSG00000028756.13	ENSMUST00000030536.13	2375	8	8329	147	-1552	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACCACTTAGAAATGCAA	NA	NA	NA	NA	NA	NA	NA	NA	138045289	138040869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_138041525_138042807_138043045_138043314_138043443_138044615_138044780_138045206
ENSMUSG00000028756.13_138040985_138047322_1	chr4	-	1275	6	ISM	ENSMUSG00000028756.13	ENSMUST00000105817.4	1711	9	6229	-245	-3585	245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGAATGAAGTAGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	138047322	138040984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_138041525_138042807_138043045_138043314_138043443_138044615_138044780_138045206_138045390_138047299
ENSMUSG00000028756.13_138041041_138047368_1	chr4	-	1265	6	ISM	ENSMUSG00000028756.13	ENSMUST00000105817.4	1711	9	6183	-189	-3631	189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAGAATTAAGACATCAG	NA	NA	NA	NA	NA	NA	NA	NA	138047368	138041040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_138041525_138042807_138043045_138043314_138043443_138044615_138044780_138045206_138045390_138047299
ENSMUSG00000028756.13_138041230_138048266_1	chr4	-	1326	7	ISM	ENSMUSG00000028756.13	ENSMUST00000105817.4	1711	9	5285	0	-4529	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCCTGATGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	138048266	138041229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_138041525_138042807_138043045_138043314_138043443_138044615_138044780_138045206_138045390_138047299_138047401_138048048
ENSMUSG00000028756.13_138041371_138053169_1	chr4	-	1278	8	FSM	ENSMUSG00000028756.13	ENSMUST00000030536.13	2375	8	449	648	382	-141	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCGTGGAGACAAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	138053169	138041370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_138041525_138042807_138043045_138043314_138043443_138044615_138044780_138045206_138045390_138047299_138047401_138048048_138048334_138053143
ENSMUSG00000028756.13_138041422_138053226_1	chr4	-	1284	8	FSM	ENSMUSG00000028756.13	ENSMUST00000030536.13	2375	8	392	699	325	-192	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCAGCAGTCAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	138053226	138041421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_138041525_138042807_138043045_138043314_138043443_138044615_138044780_138045206_138045390_138047299_138047401_138048048_138048334_138053143
ENSMUSG00000028756.13_138041480_138053282_1	chr4	-	1282	8	FSM	ENSMUSG00000028756.13	ENSMUST00000030536.13	2375	8	336	757	269	-250	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCGAGCATCTTCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	138053282	138041479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_138041525_138042807_138043045_138043314_138043443_138044615_138044780_138045206_138045390_138047299_138047401_138048048_138048334_138053143
ENSMUSG00000028756.13_138042808_138053400_1	chr4	-	1355	7	ISM	ENSMUSG00000028756.13	ENSMUST00000105817.4	1711	9	151	1578	151	-1578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCTGTTCCCAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	138053400	138042807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_138043045_138043314_138043443_138044615_138044780_138045206_138045390_138047299_138047401_138048048_138048334_138053143
ENSMUSG00000028756.13_138043312_138053557_1	chr4	-	1278	6	ISM	ENSMUSG00000028756.13	ENSMUST00000105817.4	1711	9	-6	2082	-6	-2082	intron_retention	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGCCTGCTGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	138053557	138043311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_138043443_138044615_138044780_138045206_138045390_138047299_138047401_138048048_138048334_138053143
ENSMUSG00000028757.5_138032041_138036995_1	chr4	+	706	5	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	0	2944	0	-2944	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTCAGGGGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	138032040	138036995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900
ENSMUSG00000028757.5_138032204_138037934_1	chr4	+	658	7	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	163	2005	163	-2005	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1046	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTCTGCTGATTGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	138032203	138037934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913
ENSMUSG00000028757.5_138032291_138037962_1	chr4	+	599	7	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	250	1977	250	-1977	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAACAACGCCCGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	138032290	138037962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913
ENSMUSG00000028757.5_138032332_138038022_1	chr4	+	618	7	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	291	1917	291	-1917	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTCGGCAGTGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	138032331	138038022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913
ENSMUSG00000028757.5_138032530_138038182_1	chr4	+	607	7	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	489	1757	489	-1757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCCTCTCACGCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	138032529	138038182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151
ENSMUSG00000028757.5_138035552_138038299_1	chr4	+	679	6	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	3511	1640	3511	-1640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGGTCCTGGGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	138035551	138038299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151
ENSMUSG00000028757.5_138036660_138038841_1	chr4	+	712	6	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	4619	1098	4619	-1098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGACTCCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	138036659	138038841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720
ENSMUSG00000028757.5_138036898_138039008_1	chr4	+	668	6	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	4857	931	4857	-931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGATTACAACCGGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	138036897	138039008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950
ENSMUSG00000028757.5_138037561_138039189_1	chr4	+	598	6	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	5520	750	5520	-750	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCGGCCTATCCCTACTA	NA	NA	NA	NA	NA	NA	NA	NA	138037560	138039189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ENSMUSG00000028757.5_138038000_138039308_1	chr4	+	603	5	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	5959	631	5959	-631	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACACAGTACGGCCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	138037999	138039308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ENSMUSG00000028757.5_138038720_138039596_1	chr4	+	681	3	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	6679	343	6679	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCCTCCGTGCCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	138038719	138039596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138038842_138038950_138039058_138039144
ENSMUSG00000028758.13_137989543_138018909_1	chr4	+	2517	9	NNC	ENSMUSG00000028758.13	novel	3453	15	NA	NA	0	-9784	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACCAGGGGTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	137989542	138018909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_137990045_137996255_137996403_137997156_137997259_138002277_138002468_138005106_138005560_138008667_138008778_138013742_138013897_138015239_138015869_138018679
ENSMUSG00000028758.13_137989810_138019588_1	chr4	+	2414	10	NNC	ENSMUSG00000028758.13	novel	3903	14	NA	NA	27	-9105	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	897	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTCTATGACTCTATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	137989809	138019588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_137990045_137996255_137996403_137997156_137997259_138002277_138002468_138005106_138005560_138008667_138008778_138013742_138013897_138015239_138015869_138018679_138018910_138019424
ENSMUSG00000028758.13_137989810_138021054_1	chr4	+	2514	11	NNC	ENSMUSG00000028758.13	novel	3903	14	NA	NA	27	-7639	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1073	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCAGAGTTCCAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	137989809	138021054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_137990045_137996255_137996403_137997156_137997259_138002277_138002468_138005106_138005560_138008667_138008778_138013742_138013897_138015239_138015869_138018679_138018910_138019424_138019657_138021022
ENSMUSG00000028758.13_137989972_138021110_1	chr4	+	2408	11	NNC	ENSMUSG00000028758.13	novel	3903	14	NA	NA	-57	-7583	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1022	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGGGACTCCATGCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	137989971	138021110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_137990045_137996255_137996403_137997156_137997259_138002277_138002468_138005106_138005560_138008667_138008778_138013742_138013897_138015239_138015869_138018679_138018910_138019424_138019657_138021022
ENSMUSG00000028758.13_137989992_138021206_1	chr4	+	2484	11	NNC	ENSMUSG00000028758.13	novel	3903	14	NA	NA	-37	-7487	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1059	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGAGCTGGGATGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	137989991	138021206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_137990045_137996255_137996403_137997156_137997259_138002277_138002468_138005106_138005560_138008667_138008778_138013742_138013897_138015239_138015869_138018679_138018910_138019424_138019657_138021022
ENSMUSG00000028758.13_137990092_138008727_1	chr4	+	1021	6	ISM	ENSMUSG00000028758.13	ENST00000375044.5	3538	14	63	20548	63	-19966	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTACTGTCCAGCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	137990091	138008727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137990161_137996255_137996403_137997156_137997259_138002277_138002468_138005106_138005560_138008667
ENSMUSG00000028758.13_137997154_138023574_1	chr4	+	2431	10	NNC	ENSMUSG00000028758.13	novel	3894	14	NA	NA	7125	-5119	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1016	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCCGGAGGGTTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	137997153	138023574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_137997259_138002277_138002468_138005106_138005560_138008667_138008778_138013742_138013897_138015239_138015869_138018679_138018910_138019424_138019657_138021022_138021282_138023505
ENSMUSG00000028758.13_138002332_138028693_1	chr4	+	2523	11	NNC	ENSMUSG00000028758.13	novel	3894	14	NA	NA	12303	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGCGTAAAAAAAGCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	138002331	138028693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_138002468_138005106_138005560_138008667_138008778_138013742_138013897_138015239_138015869_138018679_138018910_138019424_138019657_138021022_138021282_138023505_138023574_138025519_138025638_138028559
ENSMUSG00000028758.13_138002374_138028693_1	chr4	+	2481	11	NNC	ENSMUSG00000028758.13	novel	3894	14	NA	NA	12345	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGCGTAAAAAAAGCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	138002373	138028693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_138002468_138005106_138005560_138008667_138008778_138013742_138013897_138015239_138015869_138018679_138018910_138019424_138019657_138021022_138021282_138023505_138023574_138025519_138025638_138028559
ENSMUSG00000028758.13_138002416_138028738_1	chr4	+	2484	11	NNC	ENSMUSG00000028758.13	novel	3894	14	NA	NA	12387	45	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCTGCCTGCTGCTATC	NA	NA	NA	NA	NA	NA	NA	NA	138002415	138028738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_138002468_138005106_138005560_138008667_138008778_138013742_138013897_138015239_138015869_138018679_138018910_138019424_138019657_138021022_138021282_138023505_138023574_138025519_138025638_138028559
ENSMUSG00000028758.13_138008665_138029148_1	chr4	+	2392	9	NNC	ENSMUSG00000028758.13	novel	3894	14	NA	NA	18636	-127	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1525	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCCCTTCCAAGGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	138008664	138029148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_138008778_138013742_138013897_138015239_138015869_138018679_138018910_138019424_138019657_138021022_138021282_138023505_138023574_138025519_138025638_138028559
ENSMUSG00000028758.13_138008665_138029278_1	chr4	+	2522	9	NNC	ENSMUSG00000028758.13	novel	3894	14	NA	NA	18636	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1644	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGCGCCCTTTCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	138008664	138029278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_138008778_138013742_138013897_138015239_138015869_138018679_138018910_138019424_138019657_138021022_138021282_138023505_138023574_138025519_138025638_138028559
ENSMUSG00000028758.13_138015549_138023513_1	chr4	+	1052	5	NNC	ENSMUSG00000028758.13	novel	3903	14	NA	NA	25520	-5180	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGACACAGAACAAGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	138015548	138023513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_138015869_138018679_138018910_138019424_138019657_138021022_138021282_138023502
ENSMUSG00000028758.13_138015685_138025542_1	chr4	+	999	6	NNC	ENSMUSG00000028758.13	novel	3903	14	NA	NA	25656	-3151	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGCCGAAGCGACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	138015684	138025542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_138015869_138018679_138018910_138019424_138019657_138021022_138021282_138023502_138023574_138025519
ENSMUSG00000028758.13_138015826_138028693_1	chr4	+	1087	7	NNC	ENSMUSG00000028758.13	novel	3903	14	NA	NA	25797	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGCGTAAAAAAAGCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	138015825	138028693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_138015869_138018679_138018910_138019424_138019657_138021022_138021282_138023502_138023574_138025519_138025638_138028559
ENSMUSG00000028759.14_137944438_137969653_1	chr4	+	2537	13	FSM	ENSMUSG00000028759.14	ENSMUST00000165861.8	3361	13	-4	828	-4	-806	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCACTGTCCCCTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	137944437	137969653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_137944606_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ENSMUSG00000028759.14_137944579_137969726_1	chr4	+	2469	13	FSM	ENSMUSG00000028759.14	ENSMUST00000165861.8	3361	13	137	755	137	-733	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATGGAATCTGATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	137944578	137969726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_137944606_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ENSMUSG00000028759.14_137948925_137969877_1	chr4	+	2505	12	ISM	ENSMUSG00000028759.14	ENSMUST00000165861.8	3361	13	4483	604	4483	-582	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTTGCTAAAATGACCA	NA	NA	NA	NA	NA	NA	NA	NA	137948924	137969877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ENSMUSG00000028759.14_137948977_137969961_1	chr4	+	2537	12	ISM	ENSMUSG00000028759.14	ENSMUST00000165861.8	3361	13	4535	520	4535	-498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATATCAGGCAAACGGT	NA	NA	NA	NA	NA	NA	NA	NA	137948976	137969961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ENSMUSG00000028759.14_137953234_137970300_1	chr4	+	2524	9	ISM	ENSMUSG00000028759.14	ENSMUST00000165861.8	3361	13	8792	181	8792	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGGCTTGGGCTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	137953233	137970300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ENSMUSG00000028759.14_137955894_137970483_1	chr4	+	2642	8	ISM	ENSMUSG00000028759.14	ENSMUST00000165861.8	3361	13	11452	-2	11452	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCAGTACCTGTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	137955893	137970483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ENSMUSG00000028760.17_137785261_137853662_1	chr4	+	1421	9	ISM	ENSMUSG00000028760.17	ENSMUST00000105830.9	3252	13	64928	1083	2	-478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTCCCATTGCCCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	137785260	137853662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137785389_137810203_137810300_137814843_137814877_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847659_137847766_137853120
ENSMUSG00000028760.17_137785321_137853710_1	chr4	+	1409	9	ISM	ENSMUSG00000028760.17	ENSMUST00000105830.9	3252	13	64988	1035	62	-430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTCCCCCCACTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	137785320	137853710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137785389_137810203_137810300_137814843_137814877_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847659_137847766_137853120
ENSMUSG00000028760.17_137785368_137853767_1	chr4	+	1419	9	ISM	ENSMUSG00000028760.17	ENSMUST00000105830.9	3252	13	65035	978	109	-373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTCTCCCGCTGTTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	137785367	137853767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137785389_137810203_137810300_137814843_137814877_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847659_137847766_137853120
ENSMUSG00000028760.17_137814838_137853945_1	chr4	+	1486	7	ISM	ENSMUSG00000028760.17	ENSMUST00000105830.9	3252	13	94505	800	29579	-195	internal_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTGCTCTGCCCGTAG	NA	NA	NA	NA	NA	NA	NA	NA	137814837	137853945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137814877_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847659_137847766_137853120
ENSMUSG00000028760.17_137824060_137853945_1	chr4	+	1453	6	ISM	ENSMUSG00000028760.17	ENST00000356916.7	1806	10	38801	195	38801	-195	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTGCTCTGCCCGTAG	NA	NA	NA	NA	NA	NA	NA	NA	137824059	137853945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120
ENSMUSG00000028760.17_137824060_137854083_1	chr4	+	1490	7	ISM	ENSMUSG00000028760.17	ENSMUST00000105830.9	3252	13	103727	662	38801	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGTGTGCTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	137824059	137854083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847659_137847766_137853120_137853946_137854043
ENSMUSG00000028760.17_137899900_137910551_1	chr4	+	642	6	ISM	ENSMUSG00000028760.17	ENST00000634879.2	5286	34	179076	22914	114641	-22914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGCAGCGCAGAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	137899899	137910551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438
ENSMUSG00000028760.17_137904280_137912037_1	chr4	+	569	5	ISM	ENSMUSG00000028760.17	ENST00000634879.2	5286	34	183456	21428	119021	-21428	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTATCATTGACGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	137904279	137912037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962
ENSMUSG00000028760.17_137905228_137915417_1	chr4	+	607	5	ISM	ENSMUSG00000028760.17	ENST00000634879.2	5286	34	184404	18048	119969	-18048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGGAGTTCACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	137905227	137915417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356
ENSMUSG00000028766.11_137469199_137470549_1	chr4	-	869	2	ISM	ENSMUSG00000028766.11	ENST00000539907.5	2094	9	12515	143	12515	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTCACTGAAGTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	137470549	137469198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_137470014_137470495
ENSMUSG00000028766.11_137469280_137470582_1	chr4	-	821	2	ISM	ENSMUSG00000028766.11	ENST00000539907.5	2094	9	12482	224	12482	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGTTGCCAAGCTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	137470582	137469279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_137470014_137470495
ENSMUSG00000028766.11_137469393_137471031_1	chr4	-	827	3	ISM	ENSMUSG00000028766.11	ENST00000539907.5	2094	9	12033	337	12033	-337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGCCCCATAGTCACG	NA	NA	NA	NA	NA	NA	NA	NA	137471031	137469392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_137470014_137470495_137470616_137470945
ENSMUSG00000028766.11_137469613_137475087_1	chr4	-	866	5	ISM	ENSMUSG00000028766.11	ENST00000539907.5	2094	9	7977	557	7977	-557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAATCCTCCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	137475087	137469612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069
ENSMUSG00000028766.11_137469726_137476878_1	chr4	-	824	6	ISM	ENSMUSG00000028766.11	ENST00000539907.5	2094	9	6186	670	6186	-670	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGACAGCCAGCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	137476878	137469725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859
ENSMUSG00000028766.11_137469771_137476939_1	chr4	-	840	6	ISM	ENSMUSG00000028766.11	ENST00000539907.5	2094	9	6125	715	6125	-715	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTACGCACCCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	137476939	137469770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859
ENSMUSG00000028766.11_137469910_137479919_1	chr4	-	822	7	ISM	ENSMUSG00000028766.11	ENST00000539907.5	2094	9	3145	854	3145	-854	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGGCGTCCATGAGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	137479919	137469909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862
ENSMUSG00000028766.11_137469959_137479986_1	chr4	-	840	7	ISM	ENSMUSG00000028766.11	ENST00000539907.5	2094	9	3078	903	3078	-903	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGACGTGGCGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	137479986	137469958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862
ENSMUSG00000028766.11_137470550_137481258_1	chr4	-	863	7	ISM	ENSMUSG00000028766.11	ENST00000539907.5	2094	9	1806	1494	1806	-1494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTACAAGGTGGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	137481258	137470549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178
ENSMUSG00000028766.11_137470997_137482968_1	chr4	-	869	7	ISM	ENSMUSG00000028766.11	ENST00000539907.5	2094	9	96	1941	96	-1941	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGTTTTCACATTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	137482968	137470996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482940
ENSMUSG00000028766.11_137471078_137483017_1	chr4	-	837	7	ISM	ENSMUSG00000028766.11	ENST00000539907.5	2094	9	47	2022	47	-2022	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGATGGACCAGGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	137483017	137471077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482940
ENSMUSG00000028772.20_130210072_130243106_1	chr4	-	1097	6	FSM	ENSMUSG00000028772.20	ENST00000627541.1	1040	6	10	-67	10	44	multi-exon	FALSE	canonical	NA	NA	NA	NA	2215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGCTGTGGGTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	130243106	130210071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_130210602_130220985_130221132_130223288_130223468_130230870_130230963_130232276_130232378_130243057
ENSMUSG00000028772.20_130210072_130243106_2	chr4	-	1096	6	NNC	ENSMUSG00000028772.20	novel	1040	6	NA	NA	10	44	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGCTGTGGGTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	130243106	130210071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_130210602_130220985_130221132_130223288_130223463_130230866_130230963_130232276_130232378_130243057
ENSMUSG00000028772.20_130210072_130243106_3	chr4	-	1091	6	NNC	ENSMUSG00000028772.20	novel	1040	6	NA	NA	10	44	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2049	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGCTGTGGGTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	130243106	130210071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_130210596_130220985_130221132_130223288_130223468_130230870_130230963_130232276_130232378_130243057
ENSMUSG00000028772.20_130210072_130247939_1	chr4	-	872	5	FSM	ENSMUSG00000028772.20	ENST00000616859.4	933	5	105	-44	105	44	multi-exon	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGCTGTGGGTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	130247939	130210071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_130210602_130230870_130230963_130232276_130232378_130243057_130243151_130247883
ENSMUSG00000028772.20_130210230_130247975_1	chr4	-	750	5	FSM	ENSMUSG00000028772.20	ENST00000616859.4	933	5	69	114	69	-91	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTGTCTTCATTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	130247975	130210229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_130210602_130230870_130230963_130232276_130232378_130243057_130243151_130247883
ENSMUSG00000028772.20_130210239_130248001_1	chr4	-	765	5	NNC	ENSMUSG00000028772.20	novel	933	5	NA	NA	43	-100	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGCGCTCAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	130248001	130210238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_130210596_130230866_130230963_130232276_130232378_130243057_130243151_130247883
ENSMUSG00000028772.20_130210280_130248026_1	chr4	-	751	5	FSM	ENSMUSG00000028772.20	ENST00000616859.4	933	5	18	164	18	-141	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTCCTGACCCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	130248026	130210279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_130210602_130230870_130230963_130232276_130232378_130243057_130243151_130247883
ENSMUSG00000028772.20_130221050_130232377_1	chr4	-	376	4	ISM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	21359	11874	10739	-10911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAAGGCAGAAGGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	130232377	130221049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_130221132_130223366_130223468_130230870_130230963_130232276
ENSMUSG00000028772.20_130221110_130243090_1	chr4	-	349	5	ISM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	10646	11934	26	-10971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAGCCAGGTGGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	130243090	130221109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057
ENSMUSG00000028772.20_130223423_130247988_1	chr4	-	356	5	ISM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	5748	14247	56	-13284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATCACCCTTGAGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	130247988	130223422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928
ENSMUSG00000028776.15_130063140_130067746_1	chr4	-	182	3	ISM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	849	3745	839	-3628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACATGATTAAAGCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	130067746	130063139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_130063197_130066724_130066789_130067685
ENSMUSG00000028778.16_130019567_130031421_1	chr4	-	1155	7	FSM	ENSMUSG00000028778.16	ENST00000373705.1	1155	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCCGAGCGGTCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	130031421	130019566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_130019631_130026422_130026549_130027487_130027715_130029062_130029179_130029457_130029702_130030904_130031084_130031222
ENSMUSG00000028778.16_130019567_130031421_2	chr4	-	1151	7	NIC	ENSMUSG00000028778.16	novel	1155	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCCGAGCGGTCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	130031421	130019566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_-_130019631_130026426_130026549_130027487_130027715_130029062_130029179_130029457_130029702_130030904_130031084_130031222
ENSMUSG00000028779.17_129996351_130021458_1	chr4	+	1445	6	FSM	ENSMUSG00000028779.17	ENSMUST00000118199.8	1915	6	0	470	0	-469	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCCTGGCCTCTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	129996350	130021458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129996521_130001155_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
ENSMUSG00000028779.17_129996351_130021476_1	chr4	+	1463	6	FSM	ENSMUSG00000028779.17	ENSMUST00000118199.8	1915	6	0	452	0	-451	multi-exon	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCTCTACTCCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	129996350	130021476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129996521_130001155_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
ENSMUSG00000028779.17_129996475_130021550_1	chr4	+	1413	6	FSM	ENSMUSG00000028779.17	ENSMUST00000118199.8	1915	6	124	378	124	-377	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCAGACGAGCCCAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	129996474	130021550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129996521_130001155_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
ENSMUSG00000028788.15_129714194_129733159_1	chr4	+	590	2	ISM	ENSMUSG00000028788.15	ENSMUST00000030578.14	3646	6	180	10612	180	-8584	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGGATTCTTAATACTT	NA	NA	NA	NA	NA	NA	NA	NA	129714193	129733159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129714395_129732770
ENSMUSG00000028788.15_129714473_129740332_1	chr4	+	1120	5	ISM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	-28	3464	-28	-1411	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATGAAGCTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	129714472	129740332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129714593_129732770_129733472_129736462_129736556_129738854_129738986_129740257
ENSMUSG00000028788.15_129732944_129736556_1	chr4	+	622	2	ISM	ENSMUSG00000028788.15	ENST00000470404.5	550	4	-383	5187	-383	-5187	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCCAGTGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	129732943	129736556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129733472_129736462
ENSMUSG00000028788.15_129733137_129741921_1	chr4	+	1049	5	ISM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	18636	1875	-190	178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGAGGAAAACCAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	129733136	129741921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ENSMUSG00000028788.15_129733140_129741916_1	chr4	+	1035	5	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-187	173	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATGTCTGAGGAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	129733139	129741916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_129733472_129736462_129736550_129738854_129738986_129740257_129740333_129741506
ENSMUSG00000028788.15_129733339_129741542_1	chr4	+	337	4	FSM	ENSMUSG00000028788.15	ENST00000470404.5	550	4	12	201	12	-201	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTGGAGAAGTACCGAC	NA	NA	NA	NA	NA	NA	NA	NA	129733338	129741542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129733472_129736462_129736556_129740257_129740333_129741506
ENSMUSG00000028788.15_129733394_129741594_1	chr4	+	334	4	FSM	ENSMUSG00000028788.15	ENST00000470404.5	550	4	67	149	67	-149	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCACTGCTGTGTTCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	129733393	129741594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129733472_129736462_129736556_129740257_129740333_129741506
ENSMUSG00000028788.15_129733446_129741644_1	chr4	+	332	4	FSM	ENSMUSG00000028788.15	ENST00000470404.5	550	4	119	99	119	-99	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAGGGAACTCTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	129733445	129741644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129733472_129736462_129736556_129740257_129740333_129741506
ENSMUSG00000028789.17_128825815_128853604_1	chr4	-	1451	8	ISM	ENSMUSG00000028789.17	ENST00000373443.7	2040	11	2617	-4	1656	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAACCCTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	128853604	128825814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_128826285_128828249_128828465_128839849_128839948_128841245_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576
ENSMUSG00000028789.17_128825815_128853654_1	chr4	-	1501	8	ISM	ENSMUSG00000028789.17	ENST00000373443.7	2040	11	2567	-4	1606	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAACCCTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	128853654	128825814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_128826285_128828249_128828465_128839849_128839948_128841245_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576
ENSMUSG00000028789.17_128825934_128853723_1	chr4	-	1451	8	ISM	ENSMUSG00000028789.17	ENST00000373443.7	2040	11	2498	115	1537	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTCTGCAGCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	128853723	128825933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_128826285_128828249_128828465_128839849_128839948_128841245_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576
ENSMUSG00000028789.17_128826146_128842752_1	chr4	-	858	5	ISM	ENSMUSG00000028789.17	ENST00000373441.1	1443	9	12508	0	12508	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGCCTGTTTTCCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	128842752	128826145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_128826285_128828249_128828465_128839849_128840026_128841251_128841412_128842584
ENSMUSG00000028789.17_128826208_128855958_1	chr4	-	1483	10	ISM	ENSMUSG00000028789.17	ENST00000373443.7	2040	11	263	389	255	-62	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGGAGATCACAGACACC	NA	NA	NA	NA	NA	NA	NA	NA	128855958	128826207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_128826285_128828249_128828465_128839849_128839948_128841245_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855876
ENSMUSG00000028789.17_128826267_128843430_1	chr4	-	783	6	ISM	ENSMUSG00000028789.17	ENST00000373441.1	1443	9	11830	121	11830	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTGCCTGCAGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	128843430	128826266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_128826285_128828249_128828465_128839849_128840026_128841251_128841412_128842584_128842751_128843382
ENSMUSG00000028789.17_128828328_128856213_1	chr4	-	1488	10	ISM	ENSMUSG00000028789.17	ENST00000373443.7	2040	11	8	2509	0	-2182	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACACCGTGGACACAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	128856213	128828327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_128828465_128839849_128839948_128841245_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855876_128855995_128856089
ENSMUSG00000028789.17_128828336_128844415_1	chr4	-	789	6	ISM	ENSMUSG00000028789.17	ENST00000373441.1	1443	9	10845	2190	10845	-2190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGCTTACACCGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	128844415	128828335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_128828465_128839849_128840026_128841251_128841412_128842584_128842751_128843382_128843518_128844392
ENSMUSG00000028789.17_128828383_128856213_1	chr4	-	1433	10	ISM	ENSMUSG00000028789.17	ENST00000373443.7	2040	11	8	2564	0	-2237	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTGCCGCAACTACAA	NA	NA	NA	NA	NA	NA	NA	NA	128856213	128828382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_128828465_128839849_128839948_128841245_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855876_128855995_128856089
ENSMUSG00000028789.17_128828394_128844460_1	chr4	-	776	6	ISM	ENSMUSG00000028789.17	ENST00000373441.1	1443	9	10800	2248	10800	-2248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGGGCCTGTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	128844460	128828393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_128828465_128839849_128840026_128841251_128841412_128842584_128842751_128843382_128843518_128844392
ENSMUSG00000028789.17_128828443_128844514_1	chr4	-	781	6	ISM	ENSMUSG00000028789.17	ENST00000373441.1	1443	9	10746	2297	10746	-2297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGCAGCAGCCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	128844514	128828442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_128828465_128839849_128840026_128841251_128841412_128842584_128842751_128843382_128843518_128844392
ENSMUSG00000028789.17_128839932_128853628_1	chr4	-	780	6	ISM	ENSMUSG00000028789.17	ENST00000373441.1	1443	9	1632	13786	1632	-13786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTACCTTGATGAGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	128853628	128839931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_128840026_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576
ENSMUSG00000028789.17_128839932_128853649_1	chr4	-	801	6	ISM	ENSMUSG00000028789.17	ENST00000373441.1	1443	9	1611	13786	1611	-13786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTACCTTGATGAGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	128853649	128839931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_128840026_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576
ENSMUSG00000028789.17_128839932_128853674_1	chr4	-	822	6	NNC	ENSMUSG00000028789.17	novel	1443	9	NA	NA	1586	-13786	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTACCTTGATGAGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	128853674	128839931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_128840026_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844562_128853576
ENSMUSG00000028789.17_128839932_128853728_1	chr4	-	880	6	ISM	ENSMUSG00000028789.17	ENST00000373441.1	1443	9	1532	13786	1532	-13786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTACCTTGATGAGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	128853728	128839931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_128840026_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576
ENSMUSG00000028790.14_129609598_129613875_1	chr4	-	485	3	ISM	ENSMUSG00000028790.14	ENST00000492989.1	1215	8	22078	-284	22078	284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATAAAAAAAAGTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	129613875	129609597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129609980_129612875_129612935_129613831
ENSMUSG00000028790.14_129609875_129635699_1	chr4	-	968	8	FSM	ENSMUSG00000028790.14	ENST00000492989.1	1215	8	254	-7	254	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGAGGGAAAAATATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	129635699	129609874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129623993_129624119_129635571
ENSMUSG00000028790.14_129613831_129635878_1	chr4	-	984	6	ISM	ENSMUSG00000028790.14	ENST00000492989.1	1215	8	75	3949	75	-3949	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTCAGGCAAGAAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	129635878	129613830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129623993_129624119_129635571
ENSMUSG00000028790.14_129614622_129624052_1	chr4	-	482	5	ISM	ENSMUSG00000028790.14	ENSMUST00000066257.6	3738	9	12037	7010	11901	-4740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTTTGGTTCGTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	129624052	129614621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129614647_129616437_129616572_129619368_129619516_129621347_129621465_129623993
ENSMUSG00000028790.14_129616540_129635628_1	chr4	-	478	5	ISM	ENSMUSG00000028790.14	ENSMUST00000066257.6	3738	9	461	8928	325	-6658	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGAATTGTCCTACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	129635628	129616539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129616572_129619368_129619516_129621347_129621465_129623993_129624119_129635571
ENSMUSG00000028790.14_129621380_129635842_1	chr4	-	481	3	ISM	ENSMUSG00000028790.14	ENSMUST00000066257.6	3738	9	247	13768	111	-11498	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAAGGGTTCAATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	129635842	129621379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129621465_129623993_129624119_129635571
ENSMUSG00000028790.14_129624031_129635980_1	chr4	-	497	2	ISM	ENSMUSG00000028790.14	ENST00000492989.1	1215	8	-27	14149	-27	-14149	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGCGTGCTGATACCTG	NA	NA	NA	NA	NA	NA	NA	NA	129635980	129624030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129624119_129635571
ENSMUSG00000028790.14_129624083_129636090_1	chr4	-	555	2	ISM	ENSMUSG00000028790.14	ENST00000492989.1	1215	8	-137	14201	-1	-14201	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACGAGGAGAATTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	129636090	129624082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129624119_129635571
ENSMUSG00000028792.15_128887017_128905322_1	chr4	+	1776	7	NNC	ENSMUSG00000028792.15	novel	1781	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTGTGGAGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128887016	128905322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904360
ENSMUSG00000028792.15_128887017_128905322_2	chr4	+	1776	7	NNC	ENSMUSG00000028792.15	novel	1781	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTGTGGAGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128887016	128905322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_128887230_128892926_128893053_128895948_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
ENSMUSG00000028792.15_128887146_128902194_1	chr4	+	857	6	FSM	ENSMUSG00000028792.15	ENSMUST00000030583.13	986	6	129	0	129	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGCACTCATCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	128887145	128902194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826
ENSMUSG00000028793.16_128952202_128969395_1	chr4	+	872	4	ISM	ENSMUSG00000028793.16	ENSMUST00000097874.9	1992	9	-405	8924	138	-8920	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGGAGCCGCAAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	128952201	128969395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_128952690_128965529_128965736_128967291_128967437_128969362
ENSMUSG00000028793.16_128952408_128969999_1	chr4	+	841	5	ISM	ENSMUSG00000028793.16	ENSMUST00000097874.9	1992	9	-199	8320	-199	-8316	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGCTATCACAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	128952407	128969999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_128952690_128965529_128965736_128967291_128967437_128969362_128969526_128969954
ENSMUSG00000028793.16_128952471_128970038_1	chr4	+	817	5	ISM	ENSMUSG00000028793.16	ENSMUST00000097874.9	1992	9	-136	8281	-136	-8277	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCCCAGTAATCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	128952470	128970038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_128952690_128965529_128965736_128967291_128967437_128969362_128969526_128969954
ENSMUSG00000028793.16_128952607_128972840_1	chr4	+	853	6	ISM	ENSMUSG00000028793.16	ENSMUST00000097874.9	1992	9	0	5479	0	-5475	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGGAAGGACTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	128952606	128972840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_128952690_128965529_128965736_128967291_128967437_128969362_128969526_128969954_128970070_128972699
ENSMUSG00000028793.16_128965598_128974342_1	chr4	+	910	6	ISM	ENSMUSG00000028793.16	ENSMUST00000097874.9	1992	9	12991	3977	12991	-3973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGAGAGGTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	128965597	128974342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_128965736_128967291_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134
ENSMUSG00000028793.16_128967332_128976625_1	chr4	+	818	6	ISM	ENSMUSG00000028793.16	ENSMUST00000097874.9	1992	9	14725	1694	14725	-1690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTATGGCCGGTTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	128967331	128976625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539
ENSMUSG00000028793.16_128967419_128976671_1	chr4	+	777	6	ISM	ENSMUSG00000028793.16	ENSMUST00000097874.9	1992	9	14812	1648	14812	-1644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAGCAGGCAGAGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	128967418	128976671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539
ENSMUSG00000028793.16_128969398_128977558_1	chr4	+	819	6	ISM	ENSMUSG00000028793.16	ENST00000356990.9	2585	9	17334	757	16791	-757	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACCAAGTCACTATCAG	NA	NA	NA	NA	NA	NA	NA	NA	128969397	128977558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977463
ENSMUSG00000028793.16_128969463_128977613_1	chr4	+	809	6	ISM	ENSMUSG00000028793.16	ENST00000356990.9	2585	9	17399	702	16856	-702	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCATGCTCAGGTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	128969462	128977613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977463
ENSMUSG00000028793.16_128969974_128977720_1	chr4	+	834	5	ISM	ENSMUSG00000028793.16	ENST00000356990.9	2585	9	17910	595	17367	-595	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGCCTGGCCAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	128969973	128977720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977463
ENSMUSG00000028793.16_128970034_128977762_1	chr4	+	816	5	ISM	ENSMUSG00000028793.16	ENST00000356990.9	2585	9	17970	553	17427	-553	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGAGAGCATCCGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	128970033	128977762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977463
ENSMUSG00000028793.16_128972764_128977917_1	chr4	+	871	4	ISM	ENSMUSG00000028793.16	ENST00000356990.9	2585	9	20700	398	20157	-398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCTCGCTGCTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	128972763	128977917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_128972841_128974134_128974343_128976539_128976672_128977463
ENSMUSG00000028793.16_128974268_128978062_1	chr4	+	806	3	ISM	ENSMUSG00000028793.16	ENST00000356990.9	2585	9	22204	253	21661	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTCAAAGATTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	128974267	128978062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_128974343_128976539_128976672_128977463
ENSMUSG00000028793.16_128976568_128978178_1	chr4	+	819	2	ISM	ENSMUSG00000028793.16	ENST00000356990.9	2585	9	24504	137	23961	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTTTTAATTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	128976567	128978178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_128976672_128977463
ENSMUSG00000028793.16_128976626_128978319_1	chr4	+	902	2	ISM	ENSMUSG00000028793.16	ENST00000356990.9	2585	9	24562	-4	24019	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATGTCACTGTCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	128976625	128978319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_128976672_128977463
ENSMUSG00000028795.16_129513069_129517630_1	chr4	-	767	6	FSM	ENSMUSG00000028795.16	ENSMUST00000030586.15	879	6	110	2	41	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTACTCGGTGCTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	129517630	129513068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129513240_129514249_129514273_129514475_129514670_129514776_129514944_129516392_129516581_129517606
ENSMUSG00000028796.18_128621503_128646221_1	chr4	+	1957	7	FSM	ENSMUSG00000028796.18	ENSMUST00000106079.10	2535	7	125	453	125	-453	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGAGGTTTCTAGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	128621502	128646221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_128621664_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ENSMUSG00000028796.18_128637170_128646393_1	chr4	+	1945	6	ISM	ENSMUSG00000028796.18	ENSMUST00000106079.10	2535	7	15792	281	15792	-281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGCTGGAGGCACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	128637169	128646393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ENSMUSG00000028796.18_128637210_128646471_1	chr4	+	1983	6	ISM	ENSMUSG00000028796.18	ENSMUST00000106079.10	2535	7	15832	203	15832	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGGGCCAAGGCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	128637209	128646471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ENSMUSG00000028797.21_129494776_129496054_1	chr4	+	219	2	ISM	ENSMUSG00000028797.21	ENSMUST00000102591.10	1437	5	303	6267	292	-5321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTCTCTGGCTCGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	129494775	129496054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129494928_129495987
ENSMUSG00000028797.21_129494881_129500972_1	chr4	+	207	3	ISM	ENSMUSG00000028797.21	ENSMUST00000102591.10	1437	5	408	1349	397	-403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTGGGTGGCTGCACG	NA	NA	NA	NA	NA	NA	NA	NA	129494880	129500972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129494928_129495987_129496055_129500879
ENSMUSG00000028798.17_129485891_129494824_1	chr4	-	992	11	FSM	ENSMUSG00000028798.17	ENST00000677772.1	1149	11	111	46	68	-46	multi-exon	FALSE	canonical	NA	NA	NA	NA	8799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTACTTCGACCCACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	129494824	129485890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494762
ENSMUSG00000028798.17_129486056_129492835_1	chr4	-	730	7	ISM	ENSMUSG00000028798.17	ENST00000677540.1	1035	8	1460	211	1460	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCGCATTGAAGAGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	129492835	129486055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129486153_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747
ENSMUSG00000028798.17_129486141_129494934_1	chr4	-	984	10	ISM	ENSMUSG00000028798.17	ENST00000677772.1	1149	11	1	296	1	-85	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTTGAGGAAGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	129494934	129486140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494762
ENSMUSG00000028798.17_129487122_129489209_1	chr4	-	330	3	ISM	ENSMUSG00000028798.17	ENST00000678968.1	812	9	5086	1277	1523	-1066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGGCTTCCAGCTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	129489209	129487121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129487225_129487318_129487430_129489093
ENSMUSG00000028798.17_129487319_129490732_2	chr4	-	446	4	ISM	ENSMUSG00000028798.17	ENST00000429245.1	707	7	0	1263	0	-1263	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCTCACTGCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	129490732	129487318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129487430_129488851_129488980_129489056_129489207_129490675
ENSMUSG00000028798.17_129488920_129492835_1	chr4	-	214	3	ISM	ENSMUSG00000028798.17	ENST00000677353.1	827	9	1460	3075	1460	-2864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCCCTCGGGGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	129492835	129488919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129488980_129490666_129490733_129492747
ENSMUSG00000028798.17_129489144_129494864_1	chr4	-	500	6	ISM	ENSMUSG00000028798.17	ENST00000677202.1	1194	12	28	3299	28	-3088	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATCATCATGTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	129494864	129489143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494386_129494475_129494762
ENSMUSG00000028800.16_129409897_129436484_1	chr4	-	2011	14	NNC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2069	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGGTTGGTTTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	129436484	129409896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_129410430_129410692_129410742_129411148_129411302_129411590_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ENSMUSG00000028800.16_129409897_129436484_2	chr4	-	2006	14	NNC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2069	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGGTTGGTTTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	129436484	129409896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416288_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ENSMUSG00000028800.16_129409897_129436506_1	chr4	-	2029	14	NNC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2069	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGGTTGGTTTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	129436506	129409896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_129410430_129410692_129410733_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ENSMUSG00000028803.19_135173698_135218348_1	chr4	-	2052	11	ISM	ENSMUSG00000028803.19	ENSMUST00000105856.9	2624	12	3469	250	3469	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGCTTGGTCCAGATAG	NA	NA	NA	NA	NA	NA	NA	NA	135218348	135173697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135174717_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243
ENSMUSG00000028803.19_135173875_135218503_1	chr4	-	2030	11	ISM	ENSMUSG00000028803.19	ENSMUST00000105856.9	2624	12	3314	427	3314	-427	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAACCACAGCCTATAAGC	NA	NA	NA	NA	NA	NA	NA	NA	135218503	135173874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135174717_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243
ENSMUSG00000028807.3_129247691_129254112_1	chr4	-	1199	3	ISM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	17797	270	17797	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTTGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	129254112	129247690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129248298_129251497_129251668_129253690
ENSMUSG00000028807.3_129247907_129254332_1	chr4	-	1203	3	ISM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	17577	486	17577	-486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTCCATGGGCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	129254332	129247906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129248298_129251497_129251668_129253690
ENSMUSG00000028807.3_129248107_129263115_1	chr4	-	1258	4	ISM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	8794	686	8794	-686	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGCCGGTGGCACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	129263115	129248106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021
ENSMUSG00000028807.3_129248233_129271599_1	chr4	-	1199	5	FSM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	310	812	310	-812	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGTGCAGGAAGGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	129271599	129248232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271532
ENSMUSG00000028807.3_129251548_129271724_1	chr4	-	1209	4	ISM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	185	4127	185	-4127	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGAAACGGTTCAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	129271724	129251547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129251668_129253690_129254494_129263021_129263116_129271532
ENSMUSG00000028807.3_129253726_129271909_1	chr4	-	1239	3	ISM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	0	6305	0	-6305	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGGCCTGATGGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	129271909	129253725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129254494_129263021_129263116_129271532
ENSMUSG00000028809.17_135047802_135049670_1	chr4	-	1034	2	ISM	ENSMUSG00000028809.17	ENSMUST00000084846.12	3740	18	30885	0	30777	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	135049670	135047801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135048766_135049600
ENSMUSG00000028809.17_135048160_135051374_1	chr4	-	966	3	ISM	ENSMUSG00000028809.17	ENSMUST00000136342.9	3152	18	29181	-245	29073	245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCCCTAGAGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	135051374	135048159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135048766_135049600_135049811_135051224
ENSMUSG00000028811.13_129083553_129112983_1	chr4	+	2492	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	0	417	0	-417	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTAACCGCCACTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	129083552	129112983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ENSMUSG00000028811.13_129083695_129113007_1	chr4	+	2374	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	142	393	142	-393	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATAAAGTGTCTGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	129083694	129113007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ENSMUSG00000028811.13_129083695_129113066_1	chr4	+	2433	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	142	334	142	-334	multi-exon	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGTGTGAGTGCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	129083694	129113066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ENSMUSG00000028811.13_129083695_129113068_1	chr4	+	2435	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	142	332	142	-332	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGTGAGTGCAGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	129083694	129113068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ENSMUSG00000028811.13_129083695_129113110_1	chr4	+	2477	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	142	290	142	-290	multi-exon	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCACTGACTTTAGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	129083694	129113110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ENSMUSG00000028811.13_129083695_129113116_1	chr4	+	2483	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	142	284	142	-284	multi-exon	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTAGCCACACATTGG	NA	NA	NA	NA	NA	NA	NA	NA	129083694	129113116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ENSMUSG00000028811.13_129090733_129113288_1	chr4	+	2374	12	ISM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	7180	112	7180	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTGTGCATTCCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	129090732	129113288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ENSMUSG00000028811.13_129090908_129113402_1	chr4	+	2449	11	ISM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	7355	-2	7355	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACACAGCTTTGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	129090907	129113402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ENSMUSG00000028811.13_129091027_129113402_1	chr4	+	2330	11	ISM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	7474	-2	7474	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACACAGCTTTGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	129091026	129113402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ENSMUSG00000028820.14_126915289_126919986_1	chr4	+	1560	6	ISM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	172	5043	172	-5043	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAATGCAGAAACGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	126915288	126919986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935
ENSMUSG00000028820.14_126915857_126923865_1	chr4	+	1561	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	740	1164	740	-1164	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGACCTGATATTTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	126915856	126923865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
ENSMUSG00000028820.14_126920579_126924916_1	chr4	+	1569	4	ISM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	5462	113	5462	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGGATGTTTTGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	126920578	126924916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126920680_126921060_126921110_126921189_126921312_126923619
ENSMUSG00000028821.9_134658209_134663392_1	chr4	+	660	6	ISM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	0	1467	0	-1467	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACTCAGCCGGGATC	NA	NA	NA	NA	NA	NA	NA	NA	134658208	134663392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293
ENSMUSG00000028821.9_134658499_134664273_1	chr4	+	654	6	ISM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	290	586	290	-586	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCGAGATCAAGCAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	134658498	134664273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
ENSMUSG00000028821.9_134658579_134664302_1	chr4	+	603	6	ISM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	370	557	370	-557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGCTGTGTGAGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	134658578	134664302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
ENSMUSG00000028821.9_134662683_134664546_1	chr4	+	588	3	ISM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	4474	313	4474	-313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATTTGTATAAATCCTA	NA	NA	NA	NA	NA	NA	NA	NA	134662682	134664546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_134662776_134663293_134663393_134664150
ENSMUSG00000028822.12_134625160_134628072_1	chr4	-	690	2	ISM	ENSMUSG00000028822.12	ENSMUST00000030626.12	1204	7	14263	0	14254	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTCGTTATACCTT	NA	NA	NA	NA	NA	NA	NA	NA	134628072	134625159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134625788_134628010
ENSMUSG00000028822.12_134625160_134631053_1	chr4	-	782	3	ISM	ENSMUSG00000028822.12	ENSMUST00000030626.12	1204	7	11282	0	11273	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTCGTTATACCTT	NA	NA	NA	NA	NA	NA	NA	NA	134631053	134625159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134625788_134628010_134628072_134630960
ENSMUSG00000028822.12_134625332_134632722_1	chr4	-	678	4	ISM	ENSMUSG00000028822.12	ENSMUST00000030626.12	1204	7	9613	172	9604	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	134632722	134625331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654
ENSMUSG00000028822.12_134625332_134637036_1	chr4	-	791	5	ISM	ENSMUSG00000028822.12	ENSMUST00000030626.12	1204	7	5299	172	5290	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	134637036	134625331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923
ENSMUSG00000028822.12_134625438_134637036_1	chr4	-	685	5	ISM	ENSMUSG00000028822.12	ENSMUST00000105863.2	719	7	5290	-264	5290	264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCGGGAGGCGGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	134637036	134625437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923
ENSMUSG00000028822.12_134625545_134640506_1	chr4	-	683	6	ISM	ENSMUSG00000028822.12	ENSMUST00000105863.2	719	7	1820	-157	1820	157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACAGGAAAGGAAACCGCT	NA	NA	NA	NA	NA	NA	NA	NA	134640506	134625544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401
ENSMUSG00000028822.12_134625702_134642326_1	chr4	-	653	7	FSM	ENSMUSG00000028822.12	ENSMUST00000030626.12	1204	7	9	542	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCACCCTGCTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	134642326	134625701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640507_134642199
ENSMUSG00000028830.15_126647619_126736375_1	chr4	+	2655	16	ISM	ENSMUSG00000028830.15	ENSMUST00000047431.11	4384	21	56	11754	56	-11754	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGATTCCGACATCAT	NA	NA	NA	NA	NA	NA	NA	NA	126647618	126736375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126647789_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268
ENSMUSG00000028830.15_126722620_126747800_1	chr4	+	2665	15	ISM	ENSMUSG00000028830.15	ENSMUST00000047431.11	4384	21	75057	329	75057	-329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGTGAGTGCATATGT	NA	NA	NA	NA	NA	NA	NA	NA	126722619	126747800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
ENSMUSG00000028832.12_134195675_134201154_1	chr4	+	1008	5	NNC	ENSMUSG00000028832.12	novel	1060	5	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTCTGTTCAGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	134195674	134201154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_134195741_134197413_134197487_134197985_134198151_134200114_134200307_134200642
ENSMUSG00000028832.12_134195675_134201154_2	chr4	+	1010	5	NNC	ENSMUSG00000028832.12	novel	1060	5	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTCTGTTCAGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	134195674	134201154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200648
ENSMUSG00000028833.14_126638921_126643869_1	chr4	-	946	5	ISM	ENSMUSG00000028833.14	ENSMUST00000106116.2	2434	8	3351	397	3333	-397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGAGCTCTGGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	126643869	126638920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677
ENSMUSG00000028837.9_126571423_126603399_1	chr4	+	751	6	FSM	ENSMUSG00000028837.9	ENSMUST00000030642.3	859	6	0	108	0	-108	multi-exon	FALSE	canonical	NA	NA	NA	NA	2375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCAGGGAACTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	126571422	126603399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
ENSMUSG00000028837.9_126571423_126603399_2	chr4	+	746	6	NNC	ENSMUSG00000028837.9	novel	859	6	NA	NA	0	-108	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCAGGGAACTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	126571422	126603399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_126571639_126577914_126578038_126580821_126580888_126599850_126600014_126601346_126601397_126603271
ENSMUSG00000028837.9_126571497_126603399_1	chr4	+	677	6	FSM	ENSMUSG00000028837.9	ENSMUST00000030642.3	859	6	74	108	74	-108	multi-exon	FALSE	canonical	NA	NA	NA	NA	1707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCAGGGAACTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	126571496	126603399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
ENSMUSG00000028837.9_126571497_126603507_1	chr4	+	785	6	FSM	ENSMUSG00000028837.9	ENSMUST00000030642.3	859	6	74	0	74	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTTTGGCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	126571496	126603507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
ENSMUSG00000028840.11_133972095_133972713_1	chr4	-	309	3	FSM	ENSMUSG00000028840.11	ENSMUST00000030644.8	1994	3	190	1495	190	-1495	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGGATGCAGGGCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	133972713	133972094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_133972242_133972335_133972399_133972614
ENSMUSG00000028842.16_126238675_126241580_1	chr4	-	921	3	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	81539	55	81539	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTCAGCATCTATACT	NA	NA	NA	NA	NA	NA	NA	NA	126241580	126238674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126239376_126240423_126240624_126241560
ENSMUSG00000028842.16_126238735_126241635_1	chr4	-	916	3	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	81484	115	81484	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGAACTCTTTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	126241635	126238734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126239376_126240423_126240624_126241560
ENSMUSG00000028842.16_126238836_126244113_1	chr4	-	977	4	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	79006	216	79006	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTATTTTCAATACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	126244113	126238835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126239376_126240423_126240624_126241560_126241663_126243978
ENSMUSG00000028842.16_126238977_126244717_1	chr4	-	906	5	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	78402	357	78402	-357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTTGCTTAGCAGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	126244717	126238976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126239376_126240423_126240624_126241560_126241663_126243978_126244114_126244647
ENSMUSG00000028842.16_126239045_126244799_1	chr4	-	920	5	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	78320	425	78320	-425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGAAGATGCATCACCA	NA	NA	NA	NA	NA	NA	NA	NA	126244799	126239044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126239376_126240423_126240624_126241560_126241663_126243978_126244114_126244647
ENSMUSG00000028842.16_126239225_126248834_1	chr4	-	910	7	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	74285	605	74285	-605	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACATACAATGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	126248834	126239224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126239376_126240423_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798
ENSMUSG00000028842.16_126240427_126257458_1	chr4	-	900	7	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	65661	1807	65661	-1807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGGTAAAATAAATCCATAA	NA	NA	NA	NA	NA	NA	NA	NA	126257458	126240426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438
ENSMUSG00000028842.16_126240447_126257546_1	chr4	-	968	7	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	65573	1827	65573	-1827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGGACAAGGAACATGA	NA	NA	NA	NA	NA	NA	NA	NA	126257546	126240446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438
ENSMUSG00000028842.16_126241601_126261526_1	chr4	-	914	7	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	61593	2981	61593	-2981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCGACTTTTATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	126261526	126241600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440
ENSMUSG00000028842.16_126244016_126262348_1	chr4	-	935	7	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	60771	5396	60771	-5396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACACGGTTGTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	126262348	126244015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276
ENSMUSG00000028842.16_126244077_126262399_1	chr4	-	925	7	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	60720	5457	60720	-5457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCAGTTTGGAAAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	126262399	126244076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276
ENSMUSG00000028842.16_126244776_126265332_1	chr4	-	952	8	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	57787	6156	57787	-6156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAATCATCCAGGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	126265332	126244775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260
ENSMUSG00000028842.16_126248904_126270752_1	chr4	-	906	8	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	52367	10284	52367	-10284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTCAAGAATGTAATAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	126270752	126248903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699
ENSMUSG00000028842.16_126257544_126298087_1	chr4	-	918	8	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	25032	18924	25032	-18924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGGGGCAGACAGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	126298087	126257543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126297997
ENSMUSG00000028842.16_126257574_126298152_1	chr4	-	953	8	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	24967	18954	24967	-18954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGGTCAGCCATGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	126298152	126257573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126297997
ENSMUSG00000028842.16_126262315_126311150_1	chr4	-	915	7	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	11969	23695	11969	-23695	internal_fragment	TRUE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACTTCCAGCACCTATG	NA	NA	NA	NA	NA	NA	NA	NA	126311150	126262314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126297997_126298207_126311020
ENSMUSG00000028842.16_126262371_126311195_1	chr4	-	904	7	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	11924	23751	11924	23664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTCAGGAGTTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	126311195	126262370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126297997_126298207_126311020
ENSMUSG00000028842.16_126264054_126323086_1	chr4	-	900	7	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	33	25434	33	21981	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTACAAAACTCTGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	126323086	126264053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126297997_126298207_126311020_126311193_126323060
ENSMUSG00000028842.16_126286035_126323088_1	chr4	-	986	6	FSM	ENSMUSG00000028842.16	ENST00000324350.9	1017	6	31	0	31	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATATCAAGAGTCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	126323088	126286034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_126286354_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
ENSMUSG00000028842.16_126286035_126323088_2	chr4	-	984	6	NNC	ENSMUSG00000028842.16	novel	1017	6	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATATCAAGAGTCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	126323088	126286034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_126286354_126296957_126297095_126297997_126298207_126301534_126301654_126311020_126311193_126323060
ENSMUSG00000028843.9_133854717_133856050_1	chr4	-	693	3	FSM	ENSMUSG00000028843.9	ENSMUST00000030651.9	743	3	50	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGTGGTGTCCGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	133856050	133854716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_133855118_133855228_133855397_133855926
ENSMUSG00000028843.9_133854717_133856050_2	chr4	-	687	3	NNC	ENSMUSG00000028843.9	novel	743	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGTGGTGTCCGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	133856050	133854716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_133855118_133855228_133855391_133855926
ENSMUSG00000028847.9_126156118_126169676_1	chr4	+	1138	3	FSM	ENSMUSG00000028847.9	ENST00000616074.4	1105	3	-35	2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGTTTTCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	126156117	126169676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_126156331_126167682_126167866_126168934
ENSMUSG00000028847.9_126156299_126167759_1	chr4	+	389	4	FSM	ENSMUSG00000028847.9	ENST00000373159.1	405	4	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAAACAACCCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	126156298	126167759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_126156331_126166470_126166569_126166767_126166909_126167641
ENSMUSG00000028847.9_126156299_126169306_1	chr4	+	860	5	FSM	ENSMUSG00000028847.9	ENST00000373163.5	875	5	16	-1	16	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGCTCAAACCATTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	126156298	126169306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_126156406_126166470_126166569_126166767_126166868_126167682_126167866_126168934
ENSMUSG00000028847.9_126156299_126169676_1	chr4	+	957	3	FSM	ENSMUSG00000028847.9	ENST00000616074.4	1105	3	146	2	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGTTTTCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	126156298	126169676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_126156331_126167682_126167866_126168934
ENSMUSG00000028847.9_126156456_126169188_1	chr4	+	752	5	FSM	ENSMUSG00000028847.9	ENST00000373162.5	939	5	173	14	173	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCTAATAGAGAGCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	126156455	126169188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_126156573_126166470_126166569_126166767_126166868_126167682_126167866_126168934
ENSMUSG00000028847.9_126166470_126167759_1	chr4	+	358	3	ISM	ENSMUSG00000028847.9	ENST00000373159.1	405	4	10187	0	10187	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAAACAACCCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	126166469	126167759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126166569_126166767_126166909_126167641
ENSMUSG00000028848.14_133311673_133317208_1	chr4	+	957	4	ISM	ENSMUSG00000028848.14	ENSMUST00000030661.14	1367	5	0	1838	0	-1593	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCTTAGGGACCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	133311672	133317208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_133312181_133313220_133313378_133315810_133315972_133317077
ENSMUSG00000028848.14_133311928_133318801_1	chr4	+	867	5	FSM	ENSMUSG00000028848.14	ENSMUST00000030661.14	1367	5	255	245	198	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCAAAGGACTTCTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	133311927	133318801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_133312181_133313220_133313378_133315810_133315972_133317077_133317209_133318636
ENSMUSG00000028848.14_133312048_133319048_1	chr4	+	994	5	FSM	ENSMUSG00000028848.14	ENSMUST00000030661.14	1367	5	375	-2	318	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTTTTAGTGTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	133312047	133319048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_133312181_133313220_133313378_133315810_133315972_133317077_133317209_133318636
ENSMUSG00000028849.18_126125960_126136105_1	chr4	-	2908	17	NNC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	13913	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1073	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	126136105	126125959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128288_126128559_126128889_126130425_126130566_126130688_126130853_126130949_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809
ENSMUSG00000028849.18_126125960_126136105_2	chr4	-	2909	17	ISM	ENSMUSG00000028849.18	ENST00000373150.8	3172	18	13913	-1	13913	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	126136105	126125959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128288_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809
ENSMUSG00000028849.18_126125960_126136163_1	chr4	-	2967	17	ISM	ENSMUSG00000028849.18	ENST00000373150.8	3172	18	13855	-1	13855	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	126136163	126125959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128288_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809
ENSMUSG00000028849.18_126125960_126150136_1	chr4	-	3387	17	FSM	ENSMUSG00000028849.18	ENST00000474796.2	3367	17	-19	-1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	126150136	126125959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128288_126128559_126128889_126130425_126130566_126130688_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ENSMUSG00000028849.18_126126091_126149909_1	chr4	-	2933	18	FSM	ENSMUSG00000028849.18	ENST00000373150.8	3172	18	109	130	109	-130	multi-exon	FALSE	canonical	NA	NA	NA	NA	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGGGGCACCTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	126149909	126126090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128288_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ENSMUSG00000028849.18_126126346_126128790_1	chr4	-	1267	9	ISM	ENSMUSG00000028849.18	ENSMUST00000122129.8	3249	18	21280	386	21228	-385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACACGCTCGGACACCCA	NA	NA	NA	NA	NA	NA	NA	NA	126128790	126126345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559
ENSMUSG00000028849.18_126126439_126130444_1	chr4	-	1291	10	ISM	ENSMUSG00000028849.18	ENSMUST00000122129.8	3249	18	19626	479	19574	-478	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCAGAGTTCCTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	126130444	126126438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425
ENSMUSG00000028849.18_126126502_126130488_1	chr4	-	1272	10	ISM	ENSMUSG00000028849.18	ENSMUST00000122129.8	3249	18	19582	542	19530	-541	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCGTGGGTGTCTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	126130488	126126501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425
ENSMUSG00000028849.18_126126756_126130779_1	chr4	-	1287	10	ISM	ENSMUSG00000028849.18	ENSMUST00000122129.8	3249	18	19291	796	19239	-795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGTCTGGGTCGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	126130779	126126755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688
ENSMUSG00000028849.18_126126756_126130842_1	chr4	-	1350	10	ISM	ENSMUSG00000028849.18	ENSMUST00000122129.8	3249	18	19228	796	19176	-795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGTCTGGGTCGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	126130842	126126755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688
ENSMUSG00000028849.18_126127954_126134637_1	chr4	-	1265	8	ISM	ENSMUSG00000028849.18	ENSMUST00000106132.3	3195	17	15499	1994	15381	-1993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGGAGGCTCGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	126134637	126127953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126133824_126133931_126134506
ENSMUSG00000028849.18_126128255_126135924_1	chr4	-	1267	9	ISM	ENSMUSG00000028849.18	ENSMUST00000106132.3	3195	17	14212	2295	14094	-2294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTGACCCCTAGCAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	126135924	126128254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809
ENSMUSG00000028850.3_133302056_133311071_1	chr4	+	1521	7	FSM	ENSMUSG00000028850.3	ENSMUST00000030662.3	2004	7	0	483	0	-483	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGTTTCGGACAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	133302055	133311071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_133302522_133305217_133305646_133307096_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929
ENSMUSG00000028850.3_133302251_133311201_1	chr4	+	1456	7	FSM	ENSMUSG00000028850.3	ENSMUST00000030662.3	2004	7	195	353	195	-353	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTGTGGACCTGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	133302250	133311201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_133302522_133305217_133305646_133307096_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929
ENSMUSG00000028850.3_133302279_133311294_1	chr4	+	1521	7	FSM	ENSMUSG00000028850.3	ENSMUST00000030662.3	2004	7	223	260	223	-260	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTCTCCTGGGGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	133302278	133311294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_133302522_133305217_133305646_133307096_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929
ENSMUSG00000028850.3_133305287_133311554_1	chr4	+	1469	6	ISM	ENSMUSG00000028850.3	ENSMUST00000030662.3	2004	7	3231	0	3231	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGCCTTAGTGAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	133305286	133311554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_133305646_133307096_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929
ENSMUSG00000028851.7_133259853_133261747_1	chr4	-	670	4	ISM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	11560	0	11560	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCCCTCGTCTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	133261747	133259852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538
ENSMUSG00000028851.7_133259993_133261853_1	chr4	-	636	4	ISM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	11454	140	11454	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGAACCTTAGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	133261853	133259992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538
ENSMUSG00000028851.7_133259993_133262886_1	chr4	-	702	5	ISM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	10421	140	10421	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGAACCTTAGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	133262886	133259992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262820
ENSMUSG00000028851.7_133260561_133263044_1	chr4	-	595	5	ISM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	10263	708	10263	-708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCATGGGCTTGCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	133263044	133260560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978
ENSMUSG00000028851.7_133261539_133268527_1	chr4	-	663	4	ISM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	4780	1686	4780	-1686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGAGCGTCCCGTCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	133268527	133261538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133261854_133262820_133262887_133262978_133263183_133268449
ENSMUSG00000028851.7_133261701_133273307_1	chr4	-	693	5	ISM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	0	1848	0	-1848	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGATGTGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	133273307	133261700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133261854_133262820_133262887_133262978_133263183_133268449_133268528_133273115
ENSMUSG00000028851.7_133261720_133273307_1	chr4	-	674	5	ISM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	0	1867	0	-1867	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCAGCTTCCGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	133273307	133261719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133261854_133262820_133262887_133262978_133263183_133268449_133268528_133273115
ENSMUSG00000028857.17_132993356_133005070_1	chr4	-	1445	6	NNC	ENSMUSG00000028857.17	novel	1484	6	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	133005070	132993355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132998279_132998359_133004841
ENSMUSG00000028857.17_132993356_133005070_3	chr4	-	1443	6	NNC	ENSMUSG00000028857.17	novel	1484	6	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	133005070	132993355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132998273_132998359_133004849
ENSMUSG00000028861.14_125940718_125947351_1	chr4	+	592	6	ISM	ENSMUSG00000028861.14	ENSMUST00000030675.8	937	8	0	1974	0	-1974	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCCCCGGGCTTCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	125940717	125947351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292
ENSMUSG00000028861.14_125940770_125948804_1	chr4	+	563	6	NNC	ENSMUSG00000028861.14	novel	937	8	NA	NA	52	-521	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCAAAATCCTCCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	125940769	125948804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_125941010_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753
ENSMUSG00000028861.14_125940954_125949206_1	chr4	+	582	8	FSM	ENSMUSG00000028861.14	ENSMUST00000030675.8	937	8	236	119	236	-119	multi-exon	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGCCTTAAAAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	125940953	125949206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
ENSMUSG00000028861.14_125941227_125949325_1	chr4	+	662	7	ISM	ENSMUSG00000028861.14	ENSMUST00000030675.8	937	8	509	0	509	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAATGATGGAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	125941226	125949325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
ENSMUSG00000028862.7_132968419_132974221_1	chr4	+	1574	10	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	79	5896	79	-5896	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCTTGAGATTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	132968418	132974221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132968743_132970128_132970269_132970621_132970813_132970985_132971155_132972292_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185
ENSMUSG00000028862.7_132968492_132974256_1	chr4	+	1536	10	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	152	5861	152	-5861	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGACCCTAAGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	132968491	132974256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132968743_132970128_132970269_132970621_132970813_132970985_132971155_132972292_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185
ENSMUSG00000028862.7_132968651_132974580_1	chr4	+	1532	12	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	311	5537	311	-5537	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCCCAGTGTGGAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	132968650	132974580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132968743_132970128_132970269_132970621_132970813_132970985_132971155_132972292_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185_132974294_132974390_132974441_132974512
ENSMUSG00000028862.7_132970189_132974926_1	chr4	+	1531	13	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	1849	5191	1849	-5191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGGGCAGAGGCACGT	NA	NA	NA	NA	NA	NA	NA	NA	132970188	132974926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132970269_132970621_132970813_132970985_132971155_132972292_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891
ENSMUSG00000028862.7_132971010_132975779_1	chr4	+	1544	13	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	2670	4338	2670	-4338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTACAAGGACTCAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	132971009	132975779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132971155_132972292_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698
ENSMUSG00000028862.7_132971072_132975835_1	chr4	+	1538	13	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	2732	4282	2732	-4282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGCCCTGTGGCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	132971071	132975835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132971155_132972292_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698
ENSMUSG00000028862.7_132972290_132976165_1	chr4	+	1521	13	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	3950	3952	3950	-3952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGGCTGGCAGGCATCAC	NA	NA	NA	NA	NA	NA	NA	NA	132972289	132976165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102
ENSMUSG00000028862.7_132972941_132977275_1	chr4	+	1523	14	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	4601	2842	4601	-2842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTGTCAGCTGAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	132972940	132977275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240
ENSMUSG00000028862.7_132973621_132977582_1	chr4	+	1533	13	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	5281	2535	5281	-2535	internal_fragment	TRUE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGGCACCCTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	132973620	132977582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132973729_132973940_132974104_132974185_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518
ENSMUSG00000028862.7_132973697_132977630_1	chr4	+	1505	13	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	5357	2487	5357	-2487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTATGGGGACACCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	132973696	132977630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132973729_132973940_132974104_132974185_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518
ENSMUSG00000028862.7_132974048_132978091_1	chr4	+	1525	13	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	5708	2026	5708	-2026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAATCTCCTGGAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	132974047	132978091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132974104_132974185_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959
ENSMUSG00000028862.7_132974185_132978251_1	chr4	+	1512	13	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	5845	1866	5845	-1866	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCATGTGGAACTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	132974184	132978251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959_132978117_132978234
ENSMUSG00000028862.7_132974589_132978710_1	chr4	+	1495	12	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	6249	1407	6249	-1407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGCTCAGCCGTGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	132974588	132978710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959_132978117_132978234_132978412_132978652
ENSMUSG00000028862.7_132974890_132979084_1	chr4	+	1600	11	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	6550	1033	6550	-1033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGCCTTTTGGAATCAC	NA	NA	NA	NA	NA	NA	NA	NA	132974889	132979084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959_132978117_132978234_132978412_132978652_132978759_132978921
ENSMUSG00000028862.7_132975754_132979771_1	chr4	+	1529	12	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	7414	346	7414	-346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACACCAGAATCAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	132975753	132979771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959_132978117_132978234_132978412_132978652_132978759_132978921_132979085_132979169_132979283_132979365_132979440_132979710
ENSMUSG00000028862.7_132976118_132980066_1	chr4	+	1552	12	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	7778	51	7778	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGATACGGATGGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	132976117	132980066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959_132978117_132978234_132978412_132978652_132978759_132978921_132979085_132979169_132979283_132979365_132979440_132979710_132979788_132979962
ENSMUSG00000028862.7_132976189_132980108_1	chr4	+	1523	12	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	7849	9	7849	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACACCTGTCCTAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	132976188	132980108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959_132978117_132978234_132978412_132978652_132978759_132978921_132979085_132979169_132979283_132979365_132979440_132979710_132979788_132979962
ENSMUSG00000028863.14_124979054_125001339_1	chr4	+	479	6	ISM	ENSMUSG00000028863.14	ENST00000448519.2	666	8	84	821	84	-821	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTGATTTGAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	124979053	125001339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125001309
ENSMUSG00000028863.14_124979981_125003398_1	chr4	+	429	5	ISM	ENSMUSG00000028863.14	ENSMUST00000055213.11	872	6	1037	284	1011	-284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCTCCATCTGTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	124979980	125003398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125003369
ENSMUSG00000028863.14_124983691_125002160_1	chr4	+	437	6	ISM	ENSMUSG00000028863.14	ENST00000448519.2	666	8	4721	0	4721	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGACAACTTAGAAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	124983690	125002160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124983756_124983894_124983941_124996631_124996825_125001309_125001340_125001444_125001503_125002115
ENSMUSG00000028863.14_124996640_125003385_1	chr4	+	549	3	NNC	ENSMUSG00000028863.14	novel	4550	7	NA	NA	17670	-297	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGGCTGGCACCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	124996639	125003385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_124996825_125002079_125002150_125003091
ENSMUSG00000028863.14_124996726_125003507_1	chr4	+	579	4	ISM	ENSMUSG00000028863.14	ENST00000373075.6	1221	8	17771	193	17756	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCATTCTCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	124996725	125003507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124996825_125001309_125001340_125002115_125002150_125003091
ENSMUSG00000028864.8_16758926_16807383_1	chr5	+	1259	10	ISM	ENSMUSG00000028864.8	ENSMUST00000196645.2	2189	18	0	16625	0	-16625	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATAAATTTCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	16758925	16807383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_16759017_16765956_16766123_16769784_16769898_16771744_16771860_16777504_16777633_16781906_16782028_16783440_16783560_16798841_16799017_16803132_16803261_16807280
ENSMUSG00000028864.8_16765955_16809919_1	chr5	+	1304	10	ISM	ENSMUSG00000028864.8	ENSMUST00000196645.2	2189	18	7029	14089	7029	-14089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTACATGTCATGTACT	NA	NA	NA	NA	NA	NA	NA	NA	16765954	16809919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_16766123_16769784_16769898_16771744_16771860_16777504_16777633_16781906_16782028_16783440_16783560_16798841_16799017_16803132_16803261_16807280_16807384_16809785
ENSMUSG00000028864.8_16766072_16815123_1	chr5	+	1207	11	ISM	ENSMUSG00000028864.8	ENSMUST00000196645.2	2189	18	7146	8885	7146	-8885	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGTCAATTTGGACCG	NA	NA	NA	NA	NA	NA	NA	NA	16766071	16815123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_16766123_16769784_16769898_16771744_16771860_16777504_16777633_16781906_16782028_16783440_16783560_16798841_16799017_16803132_16803261_16807280_16807384_16809785_16809920_16815103
ENSMUSG00000028864.8_16769860_16818799_1	chr5	+	1243	12	ISM	ENSMUSG00000028864.8	ENSMUST00000196645.2	2189	18	10934	5209	10934	-5209	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACTGCAAGACAATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	16769859	16818799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_16769898_16771744_16771860_16777504_16777633_16781906_16782028_16783440_16783560_16798841_16799017_16803132_16803261_16807280_16807384_16809785_16809920_16815103_16815143_16816817_16816915_16818753
ENSMUSG00000028864.8_16771743_16820873_1	chr5	+	1651	14	ISM	ENSMUSG00000028864.8	ENSMUST00000030683.8	2642	18	12959	3431	12817	-3135	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAATCATACAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	16771742	16820873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_16771860_16777489_16777633_16781906_16782028_16783440_16783560_16798841_16799017_16803132_16803261_16807280_16807384_16809785_16809920_16815103_16815143_16816817_16816915_16818753_16818829_16819889_16820037_16820501_16820609_16820727
ENSMUSG00000028864.8_16771823_16819953_1	chr5	+	1212	12	ISM	ENSMUSG00000028864.8	ENST00000457544.7	2666	18	12957	4480	12897	-4055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGCGCAAGCAGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	16771822	16819953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_16771860_16777504_16777633_16781906_16782028_16783440_16783560_16798841_16799017_16803132_16803261_16807280_16807384_16809785_16809920_16815103_16815143_16816817_16816915_16818753_16818829_16819897
ENSMUSG00000028864.8_16777571_16820535_1	chr5	+	1226	12	ISM	ENSMUSG00000028864.8	ENST00000457544.7	2666	18	18705	3898	18645	-3473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTACCTAGTTATGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	16777570	16820535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_16777633_16781906_16782028_16783440_16783560_16798841_16799017_16803132_16803261_16807280_16807384_16809785_16809920_16815103_16815143_16816817_16816915_16818753_16818829_16819897_16820037_16820501
ENSMUSG00000028864.8_16781909_16820749_1	chr5	+	1257	12	ISM	ENSMUSG00000028864.8	ENST00000457544.7	2666	18	23043	3684	22983	-3259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAGTAGCTCATCTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	16781908	16820749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_16782028_16783440_16783560_16798841_16799017_16803132_16803261_16807280_16807384_16809785_16809920_16815103_16815143_16816817_16816915_16818753_16818829_16819897_16820037_16820501_16820609_16820727
ENSMUSG00000028864.8_16781966_16820795_1	chr5	+	1246	12	ISM	ENSMUSG00000028864.8	ENST00000457544.7	2666	18	23100	3638	23040	-3213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATCAAGGCAAGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	16781965	16820795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_16782028_16783440_16783560_16798841_16799017_16803132_16803261_16807280_16807384_16809785_16809920_16815103_16815143_16816817_16816915_16818753_16818829_16819897_16820037_16820501_16820609_16820727
ENSMUSG00000028864.8_16783439_16824144_1	chr5	+	1593	12	ISM	ENSMUSG00000028864.8	ENSMUST00000196645.2	2189	18	24513	-136	24513	136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTGTTTGTCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	16783438	16824144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_16783560_16798841_16799017_16803132_16803261_16807280_16807384_16809785_16809920_16815103_16815143_16816817_16816915_16818753_16818829_16819889_16820037_16820501_16820609_16820727_16820874_16823823
ENSMUSG00000028864.8_16798901_16824008_1	chr5	+	1269	11	ISM	ENSMUSG00000028864.8	ENST00000457544.7	2666	18	40035	425	39975	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTTTGAAGCATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	16798900	16824008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_16799017_16803132_16803261_16807280_16807384_16809785_16809920_16815103_16815143_16816817_16816915_16818753_16818829_16819897_16820037_16820501_16820609_16820727_16820874_16823823
ENSMUSG00000028864.8_16798901_16824304_1	chr5	+	1573	11	ISM	ENSMUSG00000028864.8	ENSMUST00000030683.8	2642	18	40117	0	39975	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGCTTTCCAGGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	16798900	16824304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_16799017_16803132_16803261_16807280_16807384_16809785_16809920_16815103_16815143_16816817_16816915_16818753_16818829_16819889_16820037_16820501_16820609_16820727_16820874_16823823
ENSMUSG00000028864.8_16807282_16824304_1	chr5	+	1320	9	ISM	ENSMUSG00000028864.8	ENST00000457544.7	2666	18	48416	129	48356	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGCTTTCCAGGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	16807281	16824304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_16807384_16809785_16809920_16815103_16815143_16816817_16816915_16818753_16818829_16819897_16820037_16820501_16820609_16820727_16820874_16823823
ENSMUSG00000028864.8_16815104_16824434_1	chr5	+	1214	7	ISM	ENSMUSG00000028864.8	ENST00000457544.7	2666	18	56238	-1	56178	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCATATGTTATAATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	16815103	16824434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_16815143_16816817_16816915_16818753_16818829_16819897_16820037_16820501_16820609_16820727_16820874_16823823
ENSMUSG00000028868.14_132903862_132919471_1	chr4	+	656	6	ISM	ENSMUSG00000028868.14	ENSMUST00000105912.2	2236	8	180	4344	180	-4344	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGGCCAGCTACCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	132903861	132919471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415
ENSMUSG00000028868.14_132912363_132921759_1	chr4	+	664	6	ISM	ENSMUSG00000028868.14	ENSMUST00000105912.2	2236	8	8681	2056	8681	-2056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGTCAGCCCAAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	132912362	132921759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706
ENSMUSG00000028868.14_132912993_132921906_1	chr4	+	676	5	ISM	ENSMUSG00000028868.14	ENSMUST00000105912.2	2236	8	9311	1909	9311	-1909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGACCCCTCCACCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	132912992	132921906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706
ENSMUSG00000028868.14_132917455_132922120_1	chr4	+	686	3	ISM	ENSMUSG00000028868.14	ENSMUST00000105912.2	2236	8	13773	1695	13773	-1695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCACCACCACCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	132917454	132922120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132917571_132919415_132919572_132921706
ENSMUSG00000028868.14_132917531_132922164_1	chr4	+	654	3	ISM	ENSMUSG00000028868.14	ENSMUST00000105912.2	2236	8	13849	1651	13849	-1651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTGCTGTGAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	132917530	132922164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132917571_132919415_132919572_132921706
ENSMUSG00000028868.14_132921806_132923275_1	chr4	+	661	2	ISM	ENSMUSG00000028868.14	ENSMUST00000105912.2	2236	8	18124	540	18124	-540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGAACTGCAAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	132921805	132923275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132922219_132923027
ENSMUSG00000028868.14_132922072_132923549_1	chr4	+	669	2	ISM	ENSMUSG00000028868.14	ENSMUST00000105912.2	2236	8	18390	266	18390	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATCCACCTCCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	132922071	132923549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132922219_132923027
ENSMUSG00000028869.14_124923851_124942298_1	chr4	+	1375	11	ISM	ENSMUSG00000028869.14	ENSMUST00000030684.8	2366	16	66	6871	66	-6871	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCAGCGTCTTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	124923850	124942298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139
ENSMUSG00000028869.14_124929047_124946211_1	chr4	+	1243	11	ISM	ENSMUSG00000028869.14	ENSMUST00000030684.8	2366	16	5262	2958	5262	-2958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTGGAAGTTCCCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	124929046	124946211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196
ENSMUSG00000028869.14_124931351_124946286_1	chr4	+	1226	10	ISM	ENSMUSG00000028869.14	ENSMUST00000030684.8	2366	16	7566	2883	7566	-2883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTCTATCACTGAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	124931350	124946286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196
ENSMUSG00000028869.14_124931404_124946340_1	chr4	+	1227	10	ISM	ENSMUSG00000028869.14	ENSMUST00000030684.8	2366	16	7619	2829	7619	-2829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGCAACAGATCCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	124931403	124946340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196
ENSMUSG00000028869.14_124934751_124946462_1	chr4	+	1277	9	ISM	ENSMUSG00000028869.14	ENSMUST00000030684.8	2366	16	10966	2707	10966	-2707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGGAAGAGGAAGAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	124934750	124946462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196
ENSMUSG00000028869.14_124936405_124946655_1	chr4	+	1308	8	ISM	ENSMUSG00000028869.14	ENSMUST00000030684.8	2366	16	12620	2514	12620	-2514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCCTTCTTACTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	124936404	124946655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196
ENSMUSG00000028869.14_124937449_124948020_1	chr4	+	1307	9	ISM	ENSMUSG00000028869.14	ENSMUST00000030684.8	2366	16	13664	1149	13664	-1149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATTTTTAATGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	124937448	124948020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934
ENSMUSG00000028869.14_124938070_124949025_1	chr4	+	1235	9	ISM	ENSMUSG00000028869.14	ENSMUST00000030684.8	2366	16	14285	144	14285	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTACGAGACACACAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	124938069	124949025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ENSMUSG00000028869.14_124940037_124949173_1	chr4	+	1324	8	ISM	ENSMUSG00000028869.14	ENSMUST00000030684.8	2366	16	16252	-4	16252	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAACTGTGTTCGCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124940036	124949173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ENSMUSG00000028873.17_124812437_124813424_1	chr4	-	406	2	ISM	ENSMUSG00000028873.17	ENST00000373055.6	830	10	17056	-352	17056	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGTCCAGGCGCACGGCT	NA	NA	NA	NA	NA	NA	NA	NA	124813424	124812436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_124812824_124813405
ENSMUSG00000028873.17_124812540_124813464_1	chr4	-	343	2	ISM	ENSMUSG00000028873.17	ENST00000373055.6	830	10	17016	-249	17016	249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGGGGATAAACTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	124813464	124812539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_124812824_124813405
ENSMUSG00000028873.17_124812623_124813490_1	chr4	-	286	2	ISM	ENSMUSG00000028873.17	ENST00000373055.6	830	10	16990	-166	16990	166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGACGGGGAACACAGG	NA	NA	NA	NA	NA	NA	NA	NA	124813490	124812622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_124812824_124813405
ENSMUSG00000028873.17_124812789_124830434_1	chr4	-	779	10	NNC	ENSMUSG00000028873.17	novel	830	10	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCGATGAGAGGACAACA	NA	NA	NA	NA	NA	NA	NA	NA	124830434	124812788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_124812824_124813405_124813493_124814056_124814179_124815004_124815098_124815792_124815858_124817509_124817591_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ENSMUSG00000028873.17_124812789_124830434_2	chr4	-	784	10	FSM	ENSMUSG00000028873.17	ENST00000373055.6	830	10	46	0	46	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCGATGAGAGGACAACA	NA	NA	NA	NA	NA	NA	NA	NA	124830434	124812788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817591_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ENSMUSG00000028873.17_124813349_124830434_1	chr4	-	802	9	NNC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	46	-445	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTCTGAGTAGCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	124830434	124813348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817587_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ENSMUSG00000028873.17_124814121_124820473_1	chr4	-	348	5	ISM	ENSMUSG00000028873.17	ENSMUST00000030690.12	1264	10	10193	1217	10007	-1217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCAACGGCAGCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	124820473	124814120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457
ENSMUSG00000028873.17_124815004_124824905_1	chr4	-	389	5	ISM	ENSMUSG00000028873.17	ENSMUST00000030690.12	1264	10	5761	2100	5575	-2100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTACCGAGAGTGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	124824905	124815003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864
ENSMUSG00000028873.17_124817508_124830635_1	chr4	-	455	6	ISM	ENSMUSG00000028873.17	ENST00000327331.2	925	11	65	4719	31	-4604	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAGTCAAGTAGTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	124830635	124817507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_124817591_124820457_124820531_124824864_124824906_124830147_124830277_124830381_124830485_124830609
ENSMUSG00000028873.17_124817597_124830434_1	chr4	-	325	5	ISM	ENSMUSG00000028873.17	ENSMUST00000030690.12	1264	10	232	4693	46	-4693	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAGGAAGAAGAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	124830434	124817596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ENSMUSG00000028873.17_124820479_124830635_1	chr4	-	351	5	ISM	ENSMUSG00000028873.17	ENST00000327331.2	925	11	65	7690	31	-7575	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTTTGAAATCTGTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	124830635	124820478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_124820531_124824864_124824906_124830147_124830277_124830381_124830485_124830609
ENSMUSG00000028878.12_132628019_132631254_1	chr4	-	749	3	ISM	ENSMUSG00000028878.12	ENST00000419687.6	1583	7	18579	301	18510	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTATTTTTTAAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	132631254	132628018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132628620_132629313_132629416_132631208
ENSMUSG00000028878.12_132628243_132641050_1	chr4	-	773	5	ISM	ENSMUSG00000028878.12	ENST00000010299.10	1010	10	8714	-290	8714	290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCAGAGTGTCTGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	132641050	132628242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979
ENSMUSG00000028878.12_132628289_132641112_1	chr4	-	789	5	ISM	ENSMUSG00000028878.12	ENST00000010299.10	1010	10	8652	-244	8652	244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTTAGTACTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	132641112	132628288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979
ENSMUSG00000028878.12_132628373_132641137_1	chr4	-	730	5	ISM	ENSMUSG00000028878.12	ENST00000010299.10	1010	10	8627	-160	8627	160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTATGGCTGCATGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	132641137	132628372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979
ENSMUSG00000028878.12_132628532_132643582_1	chr4	-	724	6	ISM	ENSMUSG00000028878.12	ENST00000010299.10	1010	10	6182	-1	6182	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTGAGGAGGCTCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	132643582	132628531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429
ENSMUSG00000028878.12_132631247_132649819_1	chr4	-	767	7	ISM	ENSMUSG00000028878.12	ENSMUST00000030696.11	3053	9	50	4723	14	-2714	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAAGGATCAAATGATC	NA	NA	NA	NA	NA	NA	NA	NA	132649819	132631246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
ENSMUSG00000028879.5_132581810_132585794_1	chr4	-	1208	3	ISM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	26026	998	26026	-998	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATATAGCAAAACAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	132585794	132581809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132582870_132584610_132584694_132585729
ENSMUSG00000028879.5_132581922_132587937_1	chr4	-	1187	4	ISM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	23883	1110	23883	-1110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTGTCAAAGGCTAATC	NA	NA	NA	NA	NA	NA	NA	NA	132587937	132581921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854
ENSMUSG00000028879.5_132582090_132590607_1	chr4	-	1224	6	ISM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	21213	1278	21213	-1278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGAGAGGATCGGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	132590607	132582089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469
ENSMUSG00000028879.5_132582351_132611613_1	chr4	-	1188	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	207	1539	207	-1539	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATATGCCAGCAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	132611613	132582350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ENSMUSG00000028879.5_132582407_132611666_1	chr4	-	1185	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	154	1595	154	-1595	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTATCTGAGATAAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	132611666	132582406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ENSMUSG00000028879.5_132582452_132611820_1	chr4	-	1294	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	0	1640	0	-1640	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAAATTTGTCTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	132611820	132582451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ENSMUSG00000028882.14_132554240_132560286_1	chr4	-	1564	4	ISM	ENSMUSG00000028882.14	ENSMUST00000105919.2	1090	7	10148	-898	10148	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTATGGTCTTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	132560286	132554239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132555515_132556683_132556749_132557935_132558081_132560207
ENSMUSG00000028882.14_132554240_132560428_1	chr4	-	1706	4	ISM	ENSMUSG00000028882.14	ENSMUST00000105919.2	1090	7	10006	-898	10006	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTATGGTCTTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	132560428	132554239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132555515_132556683_132556749_132557935_132558081_132560207
ENSMUSG00000028882.14_132554240_132562107_1	chr4	-	1866	5	ISM	ENSMUSG00000028882.14	ENSMUST00000105919.2	1090	7	8327	-898	8327	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1717	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTATGGTCTTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	132562107	132554239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132555515_132556683_132556749_132557935_132558081_132560207_132560429_132561947
ENSMUSG00000028882.14_132554453_132568015_1	chr4	-	1708	6	ISM	ENSMUSG00000028882.14	ENSMUST00000105919.2	1090	7	2419	-685	2419	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGAGGCTCCTCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	132568015	132554452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132555515_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954
ENSMUSG00000028882.14_132554635_132570310_1	chr4	-	1843	7	NIC	ENSMUSG00000028882.14	novel	2374	7	NA	NA	124	-395	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1614	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTGTACAGTATTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	132570310	132554634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_-_132555515_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132569993
ENSMUSG00000028882.14_132554832_132570434_1	chr4	-	1770	7	NIC	ENSMUSG00000028882.14	novel	1090	7	NA	NA	0	306	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTCGGGAGACCCAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	132570434	132554831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_-_132555515_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132569993
ENSMUSG00000028883.20_13449417_13615856_1	chr5	+	1787	11	ISM	ENSMUSG00000028883.20	ENSMUST00000030714.9	5930	17	141	36677	141	-35100	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTATCAGTTCACACAA	NA	NA	NA	NA	NA	NA	NA	NA	13449416	13615856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_13450037_13501070_13501229_13505510_13505574_13523365_13523486_13566170_13566265_13573020_13573141_13606494_13606638_13606976_13607092_13607231_13607302_13611730_13611876_13615717
ENSMUSG00000028884.15_132495643_132505673_1	chr4	+	1426	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	-3	390	-3	-390	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGTTTAAGTGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	132495642	132505673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ENSMUSG00000028884.15_132495687_132505733_1	chr4	+	1442	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	41	330	41	-330	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTATTGCGTGGTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	132495686	132505733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ENSMUSG00000028884.15_132495687_132505737_1	chr4	+	1446	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	41	326	41	-326	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCGTGGTCTGTAATAT	NA	NA	NA	NA	NA	NA	NA	NA	132495686	132505737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ENSMUSG00000028884.15_132495687_132505780_1	chr4	+	1489	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	41	283	41	-283	multi-exon	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTCGATTGTAATAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	132495686	132505780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ENSMUSG00000028884.15_132495687_132505811_1	chr4	+	1520	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	41	252	41	-252	multi-exon	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATTTTTAGCGCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	132495686	132505811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ENSMUSG00000028884.15_132495946_132505862_1	chr4	+	1520	8	NNC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	300	-201	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGAGTCTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	132495945	132505862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505105
ENSMUSG00000028884.15_132497827_132506063_1	chr4	+	1604	7	ISM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	2181	0	2181	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCGCCCCTGGCCGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	132497826	132506063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ENSMUSG00000028884.15_132499150_132506063_1	chr4	+	1474	6	ISM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	3504	0	3504	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCGCCCCTGGCCGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	132499149	132506063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ENSMUSG00000028885.9_132465329_132473867_1	chr4	-	666	5	FSM	ENSMUSG00000028885.9	ENST00000549094.1	804	5	138	0	138	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGTTTGGGTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	132473867	132465328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_132465464_132465547_132465729_132466939_132467113_132472398_132472497_132473788
ENSMUSG00000028885.9_132467035_132468840_1	chr4	-	220	2	ISM	ENSMUSG00000028885.9	ENSMUST00000030709.9	2006	8	15723	6758	5165	-1706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACAACGAGCAGACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	132468840	132467034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132467113_132468698
ENSMUSG00000028885.9_132473809_132484324_1	chr4	-	223	2	ISM	ENSMUSG00000028885.9	ENSMUST00000030709.9	2006	8	239	13532	239	-8480	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCATTCTCTGGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	132484324	132473808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132474003_132484295
ENSMUSG00000028886.16_132366357_132449240_1	chr4	+	2323	17	NNC	ENSMUSG00000028886.16	novel	2330	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTGGACAGGACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	132366356	132449240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_132366467_132384003_132384100_132389205_132389250_132394470_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420461_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
ENSMUSG00000028886.16_132366357_132449240_2	chr4	+	2319	17	NNC	ENSMUSG00000028886.16	novel	5160	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTGGACAGGACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	132366356	132449240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446527_132446624_132448589
ENSMUSG00000028886.16_132366357_132449240_3	chr4	+	2324	17	FSM	ENSMUSG00000028886.16	ENSMUST00000081726.13	5160	17	0	2836	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTGGACAGGACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	132366356	132449240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
ENSMUSG00000028886.16_132366357_132449240_4	chr4	+	2324	17	NNC	ENSMUSG00000028886.16	novel	5160	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTGGACAGGACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	132366356	132449240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439280_132446527_132446624_132448589
ENSMUSG00000028886.16_132366357_132449240_5	chr4	+	2321	17	NNC	ENSMUSG00000028886.16	novel	2330	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTGGACAGGACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	132366356	132449240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417022_132417102_132420272_132420461_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
ENSMUSG00000028886.16_132366357_132449240_6	chr4	+	2323	17	NNC	ENSMUSG00000028886.16	novel	2330	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTGGACAGGACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	132366356	132449240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_132366462_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420461_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
ENSMUSG00000028886.16_132384011_132422194_1	chr4	+	886	8	ISM	ENSMUSG00000028886.16	ENST00000436342.6	2388	17	17656	27046	6	-27046	internal_fragment	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACGTGAAGAAACTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	132384010	132422194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132384100_132389205_132389250_132397499_132397567_132400206_132400344_132408066_132408205_132417015_132417102_132420272_132420461_132422057
ENSMUSG00000028886.16_132394502_132417101_1	chr4	+	472	5	ISM	ENSMUSG00000028886.16	ENST00000373871.8	2355	17	10497	32139	10497	-32139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGTGCCCCTTTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	132394501	132417101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132394546_132397499_132397567_132400206_132400344_132408066_132408205_132417015
ENSMUSG00000028886.16_132400207_132431721_1	chr4	+	915	8	NIC	ENSMUSG00000028886.16	novel	2388	17	NA	NA	16202	-17519	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGTAAACAGTGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	132400206	132431721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_132400344_132408066_132408205_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662
ENSMUSG00000028886.16_132408131_132434386_1	chr4	+	827	8	NIC	ENSMUSG00000028886.16	novel	2388	17	NA	NA	24126	-14854	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCGAAAAGTGAGGGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	132408130	132434386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_132408205_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273
ENSMUSG00000028889.18_124744472_124747809_1	chr4	+	866	4	ISM	ENSMUSG00000028889.18	ENSMUST00000102628.11	1634	5	0	1226	0	-1226	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTATCTTTCCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	124744471	124747809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124744960_124745485_124745601_124745692_124745813_124747666
ENSMUSG00000028889.18_124744870_124748608_1	chr4	+	809	5	FSM	ENSMUSG00000028889.18	ENSMUST00000102628.11	1634	5	398	427	398	-427	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCCCCACCCCCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	124744869	124748608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_124744960_124745485_124745601_124745692_124745813_124747666_124747810_124748267
ENSMUSG00000028889.18_124745514_124748735_1	chr4	+	818	4	ISM	ENSMUSG00000028889.18	ENSMUST00000102628.11	1634	5	1042	300	1042	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGACCAACGCAGCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	124745513	124748735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124745601_124745692_124745813_124747666_124747810_124748267
ENSMUSG00000028889.18_124745566_124748786_1	chr4	+	817	4	ISM	ENSMUSG00000028889.18	ENSMUST00000102628.11	1634	5	1094	249	1094	-249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGAGTGGTTATTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	124745565	124748786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124745601_124745692_124745813_124747666_124747810_124748267
ENSMUSG00000028889.18_124745688_124748920_1	chr4	+	921	3	ISM	ENSMUSG00000028889.18	ENSMUST00000102628.11	1634	5	1216	115	1216	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGCAGAAGCCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	124745687	124748920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124745813_124747666_124747810_124748267
ENSMUSG00000028889.18_124747719_124749035_1	chr4	+	859	2	ISM	ENSMUSG00000028889.18	ENSMUST00000102628.11	1634	5	3247	0	3247	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTAAATGGTTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	124747718	124749035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124747810_124748267
ENSMUSG00000028896.14_132059440_132065102_1	chr4	-	1584	7	ISM	ENSMUSG00000028896.14	ENSMUST00000030726.13	2278	11	7914	206	7914	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGCAGTCAAGGCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	132065102	132059439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041
ENSMUSG00000028896.14_132059636_132065424_1	chr4	-	1570	8	ISM	ENSMUSG00000028896.14	ENSMUST00000030726.13	2278	11	7592	402	7592	-402	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCAAGGCTCTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	132065424	132059635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361
ENSMUSG00000028896.14_132059711_132065518_1	chr4	-	1589	8	ISM	ENSMUSG00000028896.14	ENSMUST00000030726.13	2278	11	7498	477	7498	-477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGACACAGATGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	132065518	132059710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361
ENSMUSG00000028896.14_132059850_132067298_1	chr4	-	1583	10	ISM	ENSMUSG00000028896.14	ENSMUST00000030726.13	2278	11	5718	616	5718	-616	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACCTACAAAACCCAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	132067298	132059849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132066513_132066553_132067235
ENSMUSG00000028896.14_132062162_132067285_1	chr4	-	688	6	ISM	ENSMUSG00000028896.14	ENSMUST00000084250.11	2285	10	5773	2932	5731	-2928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGTGTGCGGTTCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	132067285	132062161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235
ENSMUSG00000028896.14_132062770_132073003_1	chr4	-	677	6	ISM	ENSMUSG00000028896.14	ENSMUST00000084250.11	2285	10	55	3540	13	-3536	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATTATTTGCCAACCG	NA	NA	NA	NA	NA	NA	NA	NA	132073003	132062769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132072956
ENSMUSG00000028898.16_132039074_132052587_1	chr4	-	762	6	ISM	ENSMUSG00000028898.16	ENSMUST00000030730.14	1130	9	4262	0	4213	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCTTCTTCAACTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	132052587	132039073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518
ENSMUSG00000028898.16_132039176_132055817_1	chr4	-	782	8	ISM	ENSMUSG00000028898.16	ENSMUST00000030730.14	1130	9	1032	102	983	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGAAGGCAGAGGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	132055817	132039175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132055779
ENSMUSG00000028898.16_132041518_132056700_1	chr4	-	701	7	ISM	ENSMUSG00000028898.16	ENSMUST00000030730.14	1130	9	149	2444	100	-2444	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAACCATGGTTGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	132056700	132041517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
ENSMUSG00000028898.16_132041624_132056815_1	chr4	-	710	7	ISM	ENSMUSG00000028898.16	ENSMUST00000030730.14	1130	9	34	2550	-15	-2550	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTACCAGCAGTACCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	132056815	132041623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
ENSMUSG00000028899.12_132001724_132020484_1	chr4	+	1241	7	FSM	ENSMUSG00000028899.12	ENST00000495422.2	1256	7	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGGCAGTGATCCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	132001723	132020484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_132001799_132009304_132009390_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ENSMUSG00000028899.12_132002062_132012396_1	chr4	+	368	3	ISM	ENSMUSG00000028899.12	ENST00000263974.4	1348	6	277	8004	277	-8004	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTAATGAGCAGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	132002061	132012396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132002136_132010104_132010357_132012354
ENSMUSG00000028901.14_131952982_131979163_1	chr4	-	1856	9	NNC	ENSMUSG00000028901.14	novel	1905	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	131979163	131952981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969641_131969761_131973296_131973409_131978985
ENSMUSG00000028901.14_131952982_131979163_2	chr4	-	1848	9	NNC	ENSMUSG00000028901.14	novel	1905	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	905	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	131979163	131952981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_131953760_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973409_131978985
ENSMUSG00000028901.14_131952982_131988848_1	chr4	-	1882	10	NNC	ENSMUSG00000028901.14	novel	1905	10	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1756	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	131988848	131952981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969754_131973296_131973409_131978985_131979144_131988801
ENSMUSG00000028901.14_131952982_131988848_2	chr4	-	1882	10	NNC	ENSMUSG00000028901.14	novel	1905	10	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1973	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	131988848	131952981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_131953774_131955182_131955306_131958303_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973409_131978985_131979144_131988801
ENSMUSG00000028901.14_131952982_131988848_3	chr4	-	1883	10	NNC	ENSMUSG00000028901.14	novel	1905	10	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	131988848	131952981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969641_131969761_131973296_131973409_131978985_131979144_131988801
ENSMUSG00000028901.14_131952982_131988848_4	chr4	-	1889	10	FSM	ENSMUSG00000028901.14	ENST00000294409.2	1905	10	17	-1	-16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	131988848	131952981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973409_131978985_131979144_131988801
ENSMUSG00000028901.14_131953439_131979051_1	chr4	-	1264	9	FSM	ENSMUSG00000028901.14	ENSMUST00000030733.9	2485	9	112	1109	112	-456	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCCAAGAGCAACTCACC	NA	NA	NA	NA	NA	NA	NA	NA	131979051	131953438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985
ENSMUSG00000028901.14_131953505_131988855_1	chr4	-	1344	10	FSM	ENSMUSG00000028901.14	ENSMUST00000105964.2	1925	10	58	523	10	-522	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTGTGACTGTCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	131988855	131953504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
ENSMUSG00000028902.5_124608569_124626255_1	chr4	+	1814	17	NNC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1871	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGAATTTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	124608568	124626255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618875_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ENSMUSG00000028902.5_124608676_124626255_1	chr4	+	1708	17	NNC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGAATTTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	124608675	124626255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_124608777_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ENSMUSG00000028902.5_124608676_124626255_2	chr4	+	1709	17	NNC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGAATTTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	124608675	124626255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621872_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ENSMUSG00000028902.5_124608676_124626255_3	chr4	+	1708	17	NNC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGAATTTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	124608675	124626255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623336_124625163_124625220_124625980
ENSMUSG00000028902.5_124608676_124626255_4	chr4	+	1708	17	NNC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGAATTTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	124608675	124626255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618613_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ENSMUSG00000028906.18_131653821_131802603_1	chr4	-	2543	18	NIC	ENSMUSG00000028906.18	novel	5059	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1827	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGGTAGGGTGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	131802603	131653820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_-_131653920_131655802_131655884_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131733348_131733435_131734268_131734733_131802512
ENSMUSG00000028906.18_131653821_131802603_2	chr4	-	2538	18	NNC	ENSMUSG00000028906.18	novel	5059	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1847	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGGTAGGGTGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	131802603	131653820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_131653920_131655802_131655884_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131733353_131733435_131734268_131734733_131802512
ENSMUSG00000028906.18_131680095_131685036_1	chr4	-	1571	3	ISM	ENSMUSG00000028906.18	ENST00000650265.1	4105	17	91373	279	49706	-279	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTCATCACGTTGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	131685036	131680094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131681532_131682838_131682890_131684953
ENSMUSG00000028906.18_131680238_131695156_1	chr4	-	1580	4	ISM	ENSMUSG00000028906.18	ENST00000646189.1	3870	15	107465	422	39586	-422	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACCACTTAGATGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	131695156	131680237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131681532_131682838_131682890_131684953_131685131_131695098
ENSMUSG00000028906.18_131680300_131695194_1	chr4	-	1556	4	ISM	ENSMUSG00000028906.18	ENST00000646189.1	3870	15	107427	484	39548	-484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	951	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCAGTCTGCATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	131695194	131680299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131681532_131682838_131682890_131684953_131685131_131695098
ENSMUSG00000028906.18_131680351_131695257_1	chr4	-	1568	4	ISM	ENSMUSG00000028906.18	ENST00000646189.1	3870	15	107364	535	39485	-535	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	798	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAATTGTTTCTAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	131695257	131680350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131681532_131682838_131682890_131684953_131685131_131695098
ENSMUSG00000028906.18_131680716_131706188_1	chr4	-	1571	7	ISM	ENSMUSG00000028906.18	ENST00000646189.1	3870	15	96433	900	28554	-900	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTTCCTGAGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	131706188	131680715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131681532_131682838_131682890_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120
ENSMUSG00000028906.18_131680827_131709783_1	chr4	-	1565	8	ISM	ENSMUSG00000028906.18	ENST00000646189.1	3870	15	92838	1011	24959	-1011	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCCTTAAAATGAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	131709783	131680826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131681532_131682838_131682890_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763
ENSMUSG00000028906.18_131680899_131685027_1	chr4	-	731	3	ISM	ENSMUSG00000028906.18	ENST00000644780.1	4049	17	91382	1201	49715	-1083	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTTCTATAGCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	131685027	131680898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131681505_131682838_131682890_131684953
ENSMUSG00000028906.18_131680966_131717087_1	chr4	-	1556	9	ISM	ENSMUSG00000028906.18	ENST00000646189.1	3870	15	85534	1150	17655	1073	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGTCCCCTTCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	131717087	131680965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131681532_131682838_131682890_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025
ENSMUSG00000028906.18_131681015_131717140_1	chr4	-	1560	9	ISM	ENSMUSG00000028906.18	ENST00000646189.1	3870	15	85481	1199	17602	1024	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGGTACTCACCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	131717140	131681014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131681532_131682838_131682890_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025
ENSMUSG00000028906.18_131681231_131695170_1	chr4	-	736	7	ISM	ENSMUSG00000028906.18	ENST00000644780.1	4049	17	81239	1533	39572	808	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTCTAGCTTGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	131695170	131681230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131681505_131682838_131682890_131684953_131685131_131690234_131690298_131691239_131691282_131691441_131691499_131695098
ENSMUSG00000028906.18_131681264_131727615_1	chr4	-	1639	12	ISM	ENSMUSG00000028906.18	ENST00000646189.1	3870	15	75006	1448	7127	775	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTGACATGTCAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	131727615	131681263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131681532_131682838_131682890_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510
ENSMUSG00000028906.18_131681319_131695256_1	chr4	-	734	7	ISM	ENSMUSG00000028906.18	ENST00000644780.1	4049	17	81153	1621	39486	720	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTGCCCTGGCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	131695256	131681318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131681505_131682838_131682890_131684953_131685131_131690234_131690298_131691239_131691282_131691441_131691499_131695098
ENSMUSG00000028906.18_131681393_131730935_1	chr4	-	1550	13	ISM	ENSMUSG00000028906.18	ENST00000646189.1	3870	15	71686	1577	3807	646	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCAAAAAGTGCCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	131730935	131681392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131681532_131682838_131682890_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895
ENSMUSG00000028906.18_131681440_131730989_1	chr4	-	1557	13	ISM	ENSMUSG00000028906.18	ENST00000646189.1	3870	15	71632	1624	3753	599	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTGCTCCCAAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	131730989	131681439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131681532_131682838_131682890_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895
ENSMUSG00000028906.18_131681482_131731105_1	chr4	-	1631	13	ISM	ENSMUSG00000028906.18	ENST00000646189.1	3870	15	71516	1666	3637	557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAGATCCACTGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	131731105	131681481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131681532_131682838_131682890_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895
ENSMUSG00000028906.18_131684931_131702946_1	chr4	-	821	7	ISM	ENSMUSG00000028906.18	ENSMUST00000105972.8	2577	19	31796	31110	31796	-416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTGTGTGCAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	131702946	131684930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131685131_131690234_131690298_131691239_131691282_131691441_131691499_131695098_131695287_131701994_131702168_131702848
ENSMUSG00000028906.18_131684931_131734299_1	chr4	-	1584	12	ISM	ENSMUSG00000028906.18	ENSMUST00000054917.12	4948	17	449	34207	443	-416	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTGTGTGCAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	131734299	131684930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268
ENSMUSG00000028906.18_131684931_131734343_1	chr4	-	1628	12	ISM	ENSMUSG00000028906.18	ENSMUST00000054917.12	4948	17	405	34207	399	-416	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTGTGTGCAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	131734343	131684930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268
ENSMUSG00000028906.18_131685038_131702099_1	chr4	-	485	5	ISM	ENSMUSG00000028906.18	ENST00000648181.1	2467	13	74310	523	32643	-523	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCGAGTGGGACAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	131702099	131685037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131685131_131691239_131691282_131691441_131691499_131695098_131695287_131701994
ENSMUSG00000028906.18_131685062_131734409_1	chr4	-	1563	12	ISM	ENSMUSG00000028906.18	ENSMUST00000054917.12	4948	17	339	34338	333	-547	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAATCGGTACCCGAACC	NA	NA	NA	NA	NA	NA	NA	NA	131734409	131685061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268
ENSMUSG00000028906.18_131695160_131734527_1	chr4	-	1551	11	ISM	ENSMUSG00000028906.18	ENSMUST00000105972.8	2577	19	215	41339	215	-10645	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGCGGGGAGAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	131734527	131695159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268
ENSMUSG00000028906.18_131695204_131734585_1	chr4	-	1565	11	ISM	ENSMUSG00000028906.18	ENSMUST00000105972.8	2577	19	157	41383	157	-10689	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGCACCTATCAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	131734585	131695203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268
ENSMUSG00000028906.18_131701995_131734742_1	chr4	-	1639	10	ISM	ENSMUSG00000028906.18	ENSMUST00000105972.8	2577	19	0	48174	0	-17480	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATTAGATGTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	131734742	131701994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268
ENSMUSG00000028906.18_131702124_131802577_1	chr4	-	1565	11	ISM	ENSMUSG00000028906.18	ENST00000646189.1	3870	15	44	22308	22	-17609	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGATCCAAATTCCGATAC	NA	NA	NA	NA	NA	NA	NA	NA	131802577	131702123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802512
ENSMUSG00000028906.18_131706128_131734289_1	chr4	-	698	7	ISM	ENSMUSG00000028906.18	ENST00000644780.1	4049	17	42120	26430	453	-21613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGAGGTACATAACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	131734289	131706127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131734268
ENSMUSG00000028906.18_131706164_131734356_1	chr4	-	729	7	ISM	ENSMUSG00000028906.18	ENST00000644780.1	4049	17	42053	26466	386	-21649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAAACGCAGCAGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	131734356	131706163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131734268
ENSMUSG00000028906.18_131706210_131734425_1	chr4	-	752	7	ISM	ENSMUSG00000028906.18	ENST00000644780.1	4049	17	41984	26512	317	-21695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAGAATTAACCGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	131734425	131706209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131734268
ENSMUSG00000028906.18_131717072_131734599_1	chr4	-	728	5	ISM	ENSMUSG00000028906.18	ENST00000644780.1	4049	17	41810	37374	143	-32557	internal_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAGGAACTTGAAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	131734599	131717071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131734268
ENSMUSG00000028906.18_131717174_131734742_1	chr4	-	769	5	ISM	ENSMUSG00000028906.18	ENST00000644780.1	4049	17	41667	37476	0	-32659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTACTCGGGTCTTACACG	NA	NA	NA	NA	NA	NA	NA	NA	131734742	131717173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131734268
ENSMUSG00000028906.18_131727511_131776389_1	chr4	-	794	3	ISM	ENSMUSG00000028906.18	ENST00000644780.1	4049	17	20	47813	0	-42996	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGAGACTGCAGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	131776389	131727510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131727616_131734268_131734750_131776181
ENSMUSG00000028907.8_124571953_124587393_1	chr4	-	1596	8	NNC	ENSMUSG00000028907.8	novel	1603	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCCTTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	124587393	124571952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577135_124577545_124577649_124579881_124579944_124587232
ENSMUSG00000028909.18_131495769_131498542_1	chr4	-	1304	3	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	52735	2	50285	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGTGGCTCTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	131498542	131495768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131496872_131497063_131497200_131498477
ENSMUSG00000028909.18_131495967_131498847_1	chr4	-	1289	4	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	52430	200	49980	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATTTTGTTATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	131498847	131495966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131496872_131497063_131497200_131498477_131498636_131498757
ENSMUSG00000028909.18_131496096_131499885_1	chr4	-	1267	5	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	51392	329	48942	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCCCTGTGGCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	131499885	131496095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131496872_131497063_131497200_131498477_131498636_131498757_131498884_131499814
ENSMUSG00000028909.18_131496203_131501549_1	chr4	-	1262	6	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	49728	436	47278	-304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATATACTTCAGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	131501549	131496202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131496872_131497063_131497200_131498477_131498636_131498757_131498884_131499814_131499956_131501517
ENSMUSG00000028909.18_131496357_131503569_1	chr4	-	1304	7	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	47708	590	45258	452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGCTGAGCATCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	131503569	131496356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131496872_131497063_131497200_131498477_131498636_131498757_131498884_131499814_131499956_131501517_131501692_131503515
ENSMUSG00000028909.18_131496657_131506381_1	chr4	-	1284	9	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	44896	890	42446	152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGCTGCAGGCCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	131506381	131496656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131496872_131497063_131497200_131498477_131498636_131498757_131498884_131499814_131499956_131501517_131501692_131503515_131503666_131504092_131504229_131506333
ENSMUSG00000028909.18_131496809_131506433_1	chr4	-	1184	9	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	44844	1042	42394	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGCCTGACCTGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	131506433	131496808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131496872_131497063_131497200_131498477_131498636_131498757_131498884_131499814_131499956_131501517_131501692_131503515_131503666_131504092_131504229_131506333
ENSMUSG00000028909.18_131496809_131506478_1	chr4	-	1229	9	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	44799	1042	42349	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGCCTGACCTGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	131506478	131496808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131496872_131497063_131497200_131498477_131498636_131498757_131498884_131499814_131499956_131501517_131501692_131503515_131503666_131504092_131504229_131506333
ENSMUSG00000028909.18_131497138_131507432_1	chr4	-	1257	10	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	43845	1371	41395	-329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACAGCCTGGTGGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	131507432	131497137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131497200_131498477_131498636_131498757_131498884_131499814_131499956_131501517_131501692_131503515_131503666_131504092_131504229_131506333_131506489_131507173_131507291_131507394
ENSMUSG00000028909.18_131498541_131514677_1	chr4	-	1279	11	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	36600	2774	34150	-1732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGCTGAGGTGGACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	131514677	131498540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131498636_131498757_131498884_131499814_131499956_131501517_131501692_131503515_131503666_131504092_131504229_131506333_131506489_131507173_131507291_131507394_131507484_131508140_131508178_131514618
ENSMUSG00000028909.18_131498823_131515752_1	chr4	-	1280	12	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	35525	3056	33075	-2014	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTCTGGCACAGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	131515752	131498822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131498884_131499814_131499956_131501517_131501692_131503515_131503666_131504092_131504229_131506333_131506489_131507173_131507291_131507394_131507484_131508140_131508178_131514618_131514696_131515076_131515153_131515685
ENSMUSG00000028909.18_131501518_131520987_1	chr4	-	1361	11	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	30290	5751	27840	-4709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAATCCGATACTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	131520987	131501517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131501692_131503515_131503666_131504092_131504229_131506333_131506489_131507173_131507291_131507394_131507484_131508140_131508178_131514618_131514696_131515076_131515153_131515685_131515877_131520828
ENSMUSG00000028909.18_131503516_131525252_1	chr4	-	1275	11	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	26025	7749	23575	-6707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGGGATGAGTATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	131525252	131503515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131503666_131504092_131504229_131506333_131506489_131507173_131507291_131507394_131507484_131508140_131508178_131514618_131514696_131515076_131515153_131515685_131515877_131520828_131520987_131525163
ENSMUSG00000028909.18_131504144_131526952_1	chr4	-	1285	12	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	24325	8377	21875	6395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGTGAAGACCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	131526952	131504143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131504229_131506333_131506489_131507173_131507291_131507394_131507484_131508140_131508178_131514618_131514696_131515076_131515153_131515685_131515877_131520828_131520987_131525163_131525303_131526022_131526060_131526828
ENSMUSG00000028909.18_131506370_131527057_1	chr4	-	1269	11	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	24220	10603	21770	4169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCTGATGCCGGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	131527057	131506369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131506489_131507173_131507291_131507394_131507484_131508140_131508178_131514618_131514696_131515076_131515153_131515685_131515877_131520828_131520987_131525163_131525303_131526022_131526060_131526828
ENSMUSG00000028909.18_131506443_131527105_1	chr4	-	1244	11	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	24172	10676	21722	4096	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCCAGAGCATGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	131527105	131506442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131506489_131507173_131507291_131507394_131507484_131508140_131508178_131514618_131514696_131515076_131515153_131515685_131515877_131520828_131520987_131525163_131525303_131526022_131526060_131526828
ENSMUSG00000028909.18_131507437_131530379_1	chr4	-	1265	11	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	20898	11670	18448	3102	internal_fragment	TRUE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTGTGCGAGCATCGT	NA	NA	NA	NA	NA	NA	NA	NA	131530379	131507436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131507484_131508140_131508178_131514618_131514696_131515076_131515153_131515685_131515877_131520828_131520987_131525163_131525303_131526022_131526060_131526828_131527103_131529838_131529942_131530253
ENSMUSG00000028909.18_131515843_131535691_1	chr4	-	1226	9	ISM	ENSMUSG00000028909.18	ENST00000460170.2	5149	29	15586	19944	13136	-5304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTCCTGGGGGGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	131535691	131515842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131515877_131520828_131520987_131525163_131525303_131526022_131526060_131526828_131527103_131529838_131529942_131530253_131530456_131530689_131530800_131535522
ENSMUSG00000028909.18_131520910_131535831_1	chr4	-	1251	8	ISM	ENSMUSG00000028909.18	ENST00000460170.2	5149	29	15446	25011	12996	-10371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCACAGATCAGAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	131535831	131520909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131520987_131525163_131525303_131526022_131526060_131526828_131527103_131529838_131529942_131530253_131530456_131530689_131530800_131535522
ENSMUSG00000028909.18_131525166_131546181_1	chr4	-	1249	8	ISM	ENSMUSG00000028909.18	ENSMUST00000097860.3	3365	20	2646	14627	2646	-14627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGAGTGGGGCCAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	131546181	131525165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131525303_131526022_131526060_131526828_131527103_131529838_131529942_131530253_131530456_131530689_131530800_131535522_131535832_131546104
ENSMUSG00000028909.18_131525251_131546304_1	chr4	-	1287	8	ISM	ENSMUSG00000028909.18	ENSMUST00000097860.3	3365	20	2523	14712	2523	-14712	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGGCTCATCCTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	131546304	131525250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131525303_131526022_131526060_131526828_131527103_131529838_131529942_131530253_131530456_131530689_131530800_131535522_131535832_131546104
ENSMUSG00000028909.18_131527051_131547014_1	chr4	-	1245	7	ISM	ENSMUSG00000028909.18	ENSMUST00000097860.3	3365	20	1813	16512	1813	-16512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGAGCTCAGGACTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	131547014	131527050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131527103_131529838_131529942_131530253_131530456_131530689_131530800_131535522_131535832_131546104_131546399_131546839
ENSMUSG00000028909.18_131529839_131547388_1	chr4	-	1309	7	ISM	ENSMUSG00000028909.18	ENSMUST00000097860.3	3365	20	1439	19300	1439	-19300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAAAGCCTACGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	131547388	131529838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131529942_131530253_131530456_131530689_131530800_131535522_131535832_131546104_131546399_131546839_131547015_131547272
ENSMUSG00000028909.18_131530304_131548054_1	chr4	-	1274	8	ISM	ENSMUSG00000028909.18	ENSMUST00000097860.3	3365	20	773	19765	773	-19765	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGCTTCGGCCAGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	131548054	131530303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131530456_131530689_131530800_131535522_131535832_131546104_131546399_131546839_131547015_131547272_131547389_131547492_131547575_131548018
ENSMUSG00000028909.18_131530359_131548106_1	chr4	-	1271	8	ISM	ENSMUSG00000028909.18	ENSMUST00000097860.3	3365	20	721	19820	721	-19820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAACCTGCATCCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	131548106	131530358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131530456_131530689_131530800_131535522_131535832_131546104_131546399_131546839_131547015_131547272_131547389_131547492_131547575_131548018
ENSMUSG00000028909.18_131535574_131551202_1	chr4	-	1257	7	ISM	ENSMUSG00000028909.18	ENST00000460170.2	5149	29	75	39675	75	-25035	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGGGCGCAAGGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	131551202	131535573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131535832_131546104_131546399_131546839_131547015_131547272_131547389_131547492_131547575_131548018_131548291_131551142
ENSMUSG00000028910.13_131570816_131585102_1	chr4	+	439	4	ISM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	35	9995	35	-9995	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGATTGGAATCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	131570815	131585102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067
ENSMUSG00000028910.13_131570973_131585211_1	chr4	+	391	4	ISM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	192	9886	192	-9886	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAACCTACAAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	131570972	131585211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067
ENSMUSG00000028910.13_131581056_131588174_1	chr4	+	448	4	ISM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	10275	6923	10275	-6923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGGGAGGCCTAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	131581055	131588174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_131581125_131581895_131582028_131585067_131585212_131588071
ENSMUSG00000028910.13_131581974_131590302_1	chr4	+	478	5	ISM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	11193	4795	11193	-4795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCCTCAACCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	131581973	131590302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_131582028_131585067_131585212_131588071_131588175_131589086_131589190_131590228
ENSMUSG00000028910.13_131585184_131592643_1	chr4	+	446	6	ISM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	14403	2454	14403	-2454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACGGATGGCCTTGATAC	NA	NA	NA	NA	NA	NA	NA	NA	131585183	131592643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_131585212_131588071_131588175_131589086_131589190_131590228_131590303_131592367_131592429_131592566
ENSMUSG00000028910.13_131588130_131594807_1	chr4	+	406	6	ISM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	17349	290	17349	-290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTCACAGCCCCATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	131588129	131594807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_131588175_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
ENSMUSG00000028910.13_131589121_131594912_1	chr4	+	432	5	ISM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	18340	185	18340	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGCTCCAGAGGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	131589120	131594912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
ENSMUSG00000028910.13_131592368_131595097_1	chr4	+	474	3	ISM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	21587	0	21587	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCATGCGTGTGGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	131592367	131595097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_131592429_131592566_131592640_131594757
ENSMUSG00000028911.17_131601127_131627700_1	chr4	+	741	6	FSM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	199	1317	199	-1317	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCCGCAGTAAGAGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	131601126	131627700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_131601182_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ENSMUSG00000028911.17_131618607_131627803_1	chr4	+	700	5	ISM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	17679	1214	17679	-1214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGGAGCAGGAGCCAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	131618606	131627803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ENSMUSG00000028911.17_131619453_131627913_1	chr4	+	695	4	ISM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	18525	1104	18525	-1104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCCGCAGCCGGAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	131619452	131627913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_131619505_131624967_131625183_131627372_131627463_131627575
ENSMUSG00000028911.17_131625090_131628105_1	chr4	+	713	3	ISM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	24162	912	24162	-912	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCGGTCACCGTCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	131625089	131628105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_131625183_131627372_131627463_131627575
ENSMUSG00000028911.17_131625150_131628146_1	chr4	+	694	3	ISM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	24222	871	24222	-871	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCAAGGCAGAGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	131625149	131628146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_131625183_131627372_131627463_131627575
ENSMUSG00000028914.14_141521021_141541591_1	chr4	+	2103	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	98	1696	98	593	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGGGCTAATTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	141521020	141541591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ENSMUSG00000028914.14_141521155_141541642_1	chr4	+	2020	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	232	1645	232	644	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGGCAATAGGACTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	141521154	141541642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ENSMUSG00000028914.14_141521155_141541702_1	chr4	+	2080	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	232	1585	232	704	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAGACATGATTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	141521154	141541702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ENSMUSG00000028914.14_141523761_141534457_1	chr4	+	613	5	NNC	ENSMUSG00000028914.14	novel	1035	7	NA	NA	17	-5172	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGACAGATGGATGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	141523760	141534457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_141523920_141524012_141524168_141532672_141532850_141533140_141533231_141534425
ENSMUSG00000028914.14_141523789_141541861_1	chr4	+	2053	8	ISM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	2866	1426	45	863	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGGGGTCTCCCAATC	NA	NA	NA	NA	NA	NA	NA	NA	141523788	141541861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ENSMUSG00000028914.14_141523853_141541917_1	chr4	+	2045	8	ISM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	2930	1370	109	919	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGCAGTGACCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	141523852	141541917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ENSMUSG00000028914.14_141523868_141538912_1	chr4	+	685	6	NNC	ENSMUSG00000028914.14	novel	1035	7	NA	NA	124	-717	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGAGCCAGATGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	141523867	141538912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_141523920_141524012_141524168_141532672_141532850_141533140_141533231_141534425_141534574_141538849
ENSMUSG00000028914.14_141523884_141542020_1	chr4	+	2117	8	ISM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	2961	1267	140	1022	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCCTCTACTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	141523883	141542020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ENSMUSG00000028914.14_141524127_141539534_1	chr4	+	653	6	ISM	ENSMUSG00000028914.14	ENST00000375890.8	1035	7	383	95	383	-95	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGAAAAGTGGCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	141524126	141539534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141524168_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517
ENSMUSG00000028914.14_141532672_141539627_1	chr4	+	706	5	ISM	ENSMUSG00000028914.14	ENST00000375890.8	1035	7	8928	2	8928	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCACTTCTTCCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	141532671	141539627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517
ENSMUSG00000028914.14_141532675_141542186_1	chr4	+	1984	6	ISM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	11752	1101	8931	-1101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCCAATCTCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	141532674	141542186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ENSMUSG00000028914.14_141532695_141542291_1	chr4	+	2069	6	ISM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	11772	996	8951	-996	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTATTTCTTTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	141532694	141542291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ENSMUSG00000028914.14_141532790_141542364_1	chr4	+	2047	6	ISM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	11867	923	9046	-923	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGCAGGACACACAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	141532789	141542364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ENSMUSG00000028914.14_141538917_141542797_1	chr4	+	2115	3	ISM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	17994	490	15173	-490	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTATGGTGAGCAGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	141538916	141542797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141539030_141539517_141539628_141540905
ENSMUSG00000028914.14_141539598_141542949_1	chr4	+	2074	2	ISM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	18675	338	15854	-338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCCAGGCTGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	141539597	141542949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_141539628_141540905
ENSMUSG00000028917.15_141353981_141359322_1	chr4	-	1499	12	ISM	ENSMUSG00000028917.15	ENST00000642363.1	3815	21	31912	933	31912	-933	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGCAGAAATTTGAAGACG	NA	NA	NA	NA	NA	NA	NA	NA	141359322	141353980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023
ENSMUSG00000028919.12_140970204_140974482_1	chr4	+	776	3	ISM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	28	9695	24	-9695	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAGCACTGCCACCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	140970203	140974482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140970322_140973485_140973921_140974259
ENSMUSG00000028919.12_140970204_140974515_1	chr4	+	809	3	ISM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	28	9662	24	-9662	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGTGCTGGAGCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	140970203	140974515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140970322_140973485_140973921_140974259
ENSMUSG00000028919.12_140973484_140974637_1	chr4	+	815	2	ISM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	3308	9540	3304	-9540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCCGTGTTGTTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	140973483	140974637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140973921_140974259
ENSMUSG00000028919.12_140973707_140975287_1	chr4	+	798	4	ISM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	3531	8890	3527	-8890	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCGAGCAGCTCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	140973706	140975287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140973921_140974259_140974637_140974864_140974942_140975157
ENSMUSG00000028919.12_140974237_140976317_1	chr4	+	760	4	ISM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	4061	7860	4057	-7860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGAGGCCTCCTACATCC	NA	NA	NA	NA	NA	NA	NA	NA	140974236	140976317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140974637_140974864_140974942_140975157_140975421_140976297
ENSMUSG00000028919.12_140974413_140976561_1	chr4	+	749	5	ISM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	4237	7616	4233	-7616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGAGGCCGATGTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	140974412	140976561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140974637_140974864_140974942_140975157_140975421_140976297_140976459_140976537
ENSMUSG00000028919.12_140974482_140976605_1	chr4	+	724	5	ISM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	4306	7572	4302	-7572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCATTGCCCCGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	140974481	140976605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140974637_140974864_140974942_140975157_140975421_140976297_140976459_140976537
ENSMUSG00000028919.12_140974591_140976929_1	chr4	+	753	6	ISM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	4415	7248	4411	-7248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCAGCGGCTGCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	140974590	140976929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140974637_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876
ENSMUSG00000028919.12_140975158_140977948_1	chr4	+	782	5	ISM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	4982	6229	4978	-6229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCTCAGAGGGTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	140975157	140977948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873
ENSMUSG00000028919.12_140975174_140984292_1	chr4	+	1621	11	ISM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	4998	-115	4994	115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCTGCCTCTGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	140975173	140984292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ENSMUSG00000028919.12_140975334_140978329_1	chr4	+	771	7	ISM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	5158	5848	5154	-5848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCGCCAGCCAAACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	140975333	140978329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254
ENSMUSG00000028919.12_140976877_140983719_1	chr4	+	800	7	ISM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	6701	458	6697	-458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAACCAGGCCTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	140976876	140983719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614
ENSMUSG00000028919.12_140977872_140984177_1	chr4	+	817	7	ISM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	7696	0	7692	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCTGCCTGATGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	140977871	140984177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ENSMUSG00000028923.15_140793823_140795592_1	chr4	-	1188	2	ISM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	10076	0	10024	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATGGATATGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	140795592	140793822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_140794924_140795505
ENSMUSG00000028923.15_140793942_140797504_1	chr4	-	1205	3	ISM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	8164	119	8112	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAACCTTCCCTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	140797504	140793941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_140794924_140795505_140795591_140797366
ENSMUSG00000028923.15_140794069_140800845_1	chr4	-	1254	5	ISM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	4823	246	4771	-246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACATTTTTCTTTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	140800845	140794068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818
ENSMUSG00000028923.15_140794285_140802368_1	chr4	-	1296	7	ISM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	3300	462	3248	-462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGCCTCTGCCTCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	140802368	140794284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270
ENSMUSG00000028923.15_140794409_140805605_1	chr4	-	1257	8	FSM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	63	586	11	420	multi-exon	FALSE	canonical	NA	NA	NA	NA	2058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTTGAATGGGCTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	140805605	140794408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ENSMUSG00000028923.15_140794465_140805605_1	chr4	-	1201	8	FSM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	63	642	11	364	multi-exon	FALSE	canonical	NA	NA	NA	NA	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTTTGGTACCTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	140805605	140794464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ENSMUSG00000028923.15_140794520_140805653_1	chr4	-	1194	8	FSM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	15	697	-7	309	multi-exon	FALSE	canonical	NA	NA	NA	NA	1861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGGTGTCCCAGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	140805653	140794519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ENSMUSG00000028923.15_140794827_140805605_1	chr4	-	656	6	FSM	ENSMUSG00000028923.15	ENST00000504551.6	695	6	41	-2	11	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	4033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACCCACGGAAGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	140805605	140794826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800985_140801091_140805523
ENSMUSG00000028923.15_140794874_140800901_1	chr4	-	420	4	ISM	ENSMUSG00000028923.15	ENST00000443980.6	763	7	4715	45	4715	-45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCACAACCTTTTCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	140800901	140794873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_140794924_140797366_140797545_140799839_140799949_140800818
ENSMUSG00000028923.15_140794874_140805620_1	chr4	-	624	6	FSM	ENSMUSG00000028923.15	ENST00000504551.6	695	6	26	45	-4	-45	multi-exon	FALSE	canonical	NA	NA	NA	NA	2646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCACAACCTTTTCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	140805620	140794873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800985_140801091_140805523
ENSMUSG00000028932.9_21990281_22008785_1	chr5	+	1779	13	NNC	ENSMUSG00000028932.9	novel	1785	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCTTCCAGATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	21990280	22008785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_21990516_21991647_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008455_22008544
ENSMUSG00000028932.9_21990281_22008785_2	chr5	+	1780	13	NNC	ENSMUSG00000028932.9	novel	1785	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5068	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCTTCCAGATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	21990280	22008785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_21990516_21991647_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004548_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
ENSMUSG00000028932.9_21990281_22008785_3	chr5	+	1779	13	NNC	ENSMUSG00000028932.9	novel	1785	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4550	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCTTCCAGATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	21990280	22008785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_21990516_21991647_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005547_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
ENSMUSG00000028932.9_21990281_22008785_4	chr5	+	1765	12	NNC	ENSMUSG00000028932.9	novel	1785	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCTTCCAGATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	21990280	22008785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_21990516_21991647_21991883_22000742_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
ENSMUSG00000028932.9_21991772_22006259_1	chr5	+	677	8	ISM	ENSMUSG00000028932.9	ENST00000425206.6	1338	12	0	2447	0	-2447	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCACCAGGCACAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	21991771	22006259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004942_22005007_22005541_22005638_22006205
ENSMUSG00000028932.9_21991811_22006323_1	chr5	+	702	8	ISM	ENSMUSG00000028932.9	ENST00000425206.6	1338	12	39	2383	39	-2383	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCGAGTTATTGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	21991810	22006323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004942_22005007_22005541_22005638_22006205
ENSMUSG00000028932.9_22000761_22007612_1	chr5	+	728	7	ISM	ENSMUSG00000028932.9	ENST00000425206.6	1338	12	8989	1094	8989	-1094	internal_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATGATATTTTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	22000760	22007612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_22000843_22001530_22001631_22004420_22004553_22004942_22005007_22005541_22005638_22006205_22006371_22007523
ENSMUSG00000028932.9_22000793_22008094_1	chr5	+	722	8	ISM	ENSMUSG00000028932.9	ENST00000425206.6	1338	12	9021	612	9021	-612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGACAATGAAGTGCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	22000792	22008094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_22000843_22001530_22001631_22004420_22004553_22004942_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067
ENSMUSG00000028932.9_22001561_22008159_1	chr5	+	707	7	ISM	ENSMUSG00000028932.9	ENST00000425206.6	1338	12	9789	547	9789	-547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAACATCAAGGTGCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	22001560	22008159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_22001631_22004420_22004553_22004942_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067
ENSMUSG00000028932.9_22001609_22008213_1	chr5	+	713	7	ISM	ENSMUSG00000028932.9	ENST00000425206.6	1338	12	9837	493	9837	-493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGAGACCGGGGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	22001608	22008213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_22001631_22004420_22004553_22004942_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067
ENSMUSG00000028932.9_22004510_22008391_1	chr5	+	687	7	ISM	ENSMUSG00000028932.9	ENST00000425206.6	1338	12	12738	315	12738	-315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGCTCAATGAGTGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	22004509	22008391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_22004553_22004942_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363
ENSMUSG00000028936.16_152410310_152416937_1	chr4	+	468	4	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	152410309	152416937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_152410353_152411943_152412043_152414460_152414586_152416736
ENSMUSG00000028936.16_152411937_152418528_1	chr4	+	888	4	FSM	ENSMUSG00000028936.16	ENST00000234875.9	898	4	0	10	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCACTGTGCAAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	152411936	152418528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_152412043_152414460_152414586_152416736_152416967_152418101
ENSMUSG00000028937.15_152262591_152356064_1	chr4	+	1212	9	FSM	ENSMUSG00000028937.15	ENSMUST00000075363.10	1457	9	0	245	0	-240	multi-exon	FALSE	canonical	NA	NA	NA	NA	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATAGCCCAGTATGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	152262590	152356064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ENSMUSG00000028943.19_152205339_152208189_1	chr4	-	407	2	ISM	ENSMUSG00000028943.19	ENST00000645284.1	3408	12	28601	485	5193	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	152208189	152205338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152205723_152208166
ENSMUSG00000028943.19_152212936_152215525_1	chr4	-	375	2	ISM	ENSMUSG00000028943.19	ENSMUST00000105653.8	1411	8	797	7609	797	-4200	intron_retention	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGAAGCCGACACCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	152215525	152212935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152213011_152215225
ENSMUSG00000028943.19_152212988_152215586_1	chr4	-	384	2	ISM	ENSMUSG00000028943.19	ENSMUST00000105653.8	1411	8	736	7661	736	-4252	intron_retention	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAACGGGTGATAACTC	NA	NA	NA	NA	NA	NA	NA	NA	152215586	152212987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152213011_152215225
ENSMUSG00000028943.19_152215345_152218725_1	chr4	-	431	2	ISM	ENSMUSG00000028943.19	ENST00000645284.1	3408	12	18065	10491	2014	-6609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCGCCGCCGCCGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	152218725	152215344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152215668_152218617
ENSMUSG00000028943.19_152215429_152218765_1	chr4	-	387	2	ISM	ENSMUSG00000028943.19	ENST00000645284.1	3408	12	18025	10575	1974	-6693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCGCAGGCGGCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	152218765	152215428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152215668_152218617
ENSMUSG00000028943.19_152215479_152218822_1	chr4	-	394	2	ISM	ENSMUSG00000028943.19	ENST00000645284.1	3408	12	17968	10625	1917	-6743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGGGACCGAGCCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	152218822	152215478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152215668_152218617
ENSMUSG00000028943.19_152215593_152219960_1	chr4	-	391	3	ISM	ENSMUSG00000028943.19	ENST00000645284.1	3408	12	16830	10739	779	-6857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACGGGGGACTACTACCG	NA	NA	NA	NA	NA	NA	NA	NA	152219960	152215592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152215668_152218617_152218899_152219925
ENSMUSG00000028943.19_152218805_152222965_1	chr4	-	375	3	ISM	ENSMUSG00000028943.19	ENSMUST00000030785.15	3406	16	13699	14017	-2183	-10069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGCCACCACCTCCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	152222965	152218804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152218899_152219929_152220132_152222886
ENSMUSG00000028943.19_152223524_152236394_1	chr4	-	377	3	ISM	ENSMUSG00000028943.19	ENSMUST00000207676.2	4618	12	285	14788	270	-14788	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCACAACCCAGTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	152236394	152223523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152223683_152233315_152233510_152236370
ENSMUSG00000028943.19_152223627_152236508_1	chr4	-	388	3	ISM	ENSMUSG00000028943.19	ENSMUST00000207676.2	4618	12	171	14891	156	-14891	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCCACCTGGAAGTGACG	NA	NA	NA	NA	NA	NA	NA	NA	152236508	152223626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152223683_152233315_152233510_152236370
ENSMUSG00000028943.19_152233413_152236669_1	chr4	-	396	2	ISM	ENSMUSG00000028943.19	ENSMUST00000207676.2	4618	12	10	24677	-5	-24677	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCCATCACCACAGACACG	NA	NA	NA	NA	NA	NA	NA	NA	152236669	152233412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152233510_152236370
ENSMUSG00000028944.15_25067849_25227069_1	chr5	-	2520	14	ISM	ENSMUSG00000028944.15	ENSMUST00000030784.14	3331	16	78571	107	2	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGTGTATATATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	25227069	25067848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320_25113391_25152421_25152637_25226789
ENSMUSG00000028944.15_25068774_25152469_1	chr5	-	1151	13	ISM	ENSMUSG00000028944.15	ENSMUST00000076306.12	2838	14	48282	1028	-39002	-66	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGAAGAGAGTAAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	25152469	25068773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320_25113391_25152421
ENSMUSG00000028944.15_25068774_25152528_1	chr5	-	1210	13	ISM	ENSMUSG00000028944.15	ENSMUST00000076306.12	2838	14	48223	1028	-39061	-66	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGAAGAGAGTAAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	25152528	25068773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320_25113391_25152421
ENSMUSG00000028944.15_25068774_25152587_1	chr5	-	1269	13	ISM	ENSMUSG00000028944.15	ENSMUST00000076306.12	2838	14	48164	1028	-39120	-66	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGAAGAGAGTAAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	25152587	25068773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320_25113391_25152421
ENSMUSG00000028944.15_25071155_25264269_1	chr5	-	1179	13	ISM	ENSMUSG00000028944.15	ENST00000651378.1	2579	14	421	3170	421	-2447	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGAATGAAGCAGATAGC	NA	NA	NA	NA	NA	NA	NA	NA	25264269	25071154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320_25113391_25152421_25152637_25264218
ENSMUSG00000028944.15_25078913_25264646_1	chr5	-	1158	9	ISM	ENSMUSG00000028944.15	ENST00000651378.1	2579	14	44	10928	44	-10205	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGAATCCTCAAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	25264646	25078912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320_25113391_25152421_25152637_25264218
ENSMUSG00000028945.10_25007821_25013433_1	chr5	-	1204	5	ISM	ENSMUSG00000028945.10	ENSMUST00000030787.9	1784	8	34189	0	-629	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATCCTCCATCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	25013433	25007820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350
ENSMUSG00000028945.10_25008308_25047505_1	chr5	-	1180	8	FSM	ENSMUSG00000028945.10	ENSMUST00000030787.9	1784	8	117	487	117	-487	multi-exon	FALSE	canonical	NA	NA	NA	NA	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTGTTTATTTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	25047505	25008307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047182
ENSMUSG00000028945.10_25012000_25012804_2	chr5	-	168	3	FSM	ENSMUSG00000028945.10	ENST00000411920.1	168	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTATGTAGTTTCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	25012804	25011999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_25012059_25012600_25012651_25012745
ENSMUSG00000028949.14_24797620_24801053_1	chr5	-	1229	10	ISM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	5957	0	5957	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24801053	24797619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949
ENSMUSG00000028949.14_24798268_24827594_1	chr5	-	1246	11	ISM	ENSMUSG00000028949.14	ENSMUST00000195943.2	1712	14	1815	648	1815	-648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTACGTCCAAGACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	24827594	24798267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24827521
ENSMUSG00000028949.14_24798312_24827666_1	chr5	-	1274	11	ISM	ENSMUSG00000028949.14	ENSMUST00000195943.2	1712	14	1743	692	1743	-692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCCAGAGGGACTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	24827666	24798311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24827521
ENSMUSG00000028950.4_152113283_152115796_1	chr4	-	312	3	ISM	ENSMUSG00000028950.4	ENST00000351136.7	1777	5	7057	760	7057	-760	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGTCTTCACACGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	152115796	152113282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152113455_152115240_152115362_152115777
ENSMUSG00000028950.4_152113338_152115844_1	chr4	-	305	3	ISM	ENSMUSG00000028950.4	ENST00000351136.7	1777	5	7009	815	7009	-815	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGCTAACACGCTATTG	NA	NA	NA	NA	NA	NA	NA	NA	152115844	152113337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152113455_152115240_152115362_152115777
ENSMUSG00000028950.4_152113400_152115893_1	chr4	-	292	3	ISM	ENSMUSG00000028950.4	ENST00000351136.7	1777	5	6960	877	6960	-877	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCTTCTCACGCACCG	NA	NA	NA	NA	NA	NA	NA	NA	152115893	152113399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152113455_152115240_152115362_152115777
ENSMUSG00000028950.4_152115305_152119107_1	chr4	-	311	3	ISM	ENSMUSG00000028950.4	ENST00000351136.7	1777	5	3746	2782	3746	-2782	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCCCACCACTGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	152119107	152115304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152115362_152115777_152115991_152119066
ENSMUSG00000028950.4_152119135_152122704_1	chr4	-	294	2	ISM	ENSMUSG00000028950.4	ENST00000351136.7	1777	5	149	6612	149	-6612	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGCCTGATAACACTGAC	NA	NA	NA	NA	NA	NA	NA	NA	152122704	152119134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152119374_152122649
ENSMUSG00000028950.4_152119187_152122758_1	chr4	-	296	2	ISM	ENSMUSG00000028950.4	ENST00000351136.7	1777	5	95	6664	95	-6664	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAGATGCAGAGAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	152122758	152119186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152119374_152122649
ENSMUSG00000028950.4_152119237_152122817_1	chr4	-	305	2	ISM	ENSMUSG00000028950.4	ENST00000351136.7	1777	5	36	6714	36	-6714	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGTCTATGCCACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	152122817	152119236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152119374_152122649
ENSMUSG00000028953.11_24770761_24771553_1	chr5	-	318	2	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	10912	418	10912	-418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATACTGCCCTCAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	24771553	24770760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24771002_24771476
ENSMUSG00000028953.11_24770824_24771597_1	chr5	-	299	2	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	10868	481	10868	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGCTGACACCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	24771597	24770823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24771002_24771476
ENSMUSG00000028953.11_24770964_24772235_1	chr5	-	296	3	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	10230	621	10230	-621	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAAGTGGCCTGGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	24772235	24770963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24771002_24771476_24771681_24772181
ENSMUSG00000028953.11_24771562_24773232_1	chr5	-	341	4	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	9233	1219	9233	-1219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCATTGATGCTCTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	24773232	24771561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24771681_24772181_24772311_24772498_24772562_24773202
ENSMUSG00000028953.11_24773258_24774106_1	chr5	-	304	4	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	8359	2915	8359	-2915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGGACCCAATGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	24774106	24773257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24773314_24773564_24773655_24773735_24773856_24774068
ENSMUSG00000028953.11_24773827_24777053_1	chr5	-	281	4	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	5412	3484	5412	-3484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAAGCTGGCCCGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	24777053	24773826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24773856_24774068_24774165_24776141_24776245_24777000
ENSMUSG00000028953.11_24774130_24778474_1	chr5	-	289	4	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	3991	3787	3991	-3787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGAAGAGAACCAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	24778474	24774129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24774165_24776141_24776245_24777000_24777097_24778419
ENSMUSG00000028953.11_24776216_24778613_1	chr5	-	319	3	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	3852	5873	3852	-5873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCAGGACTTCCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	24778613	24776215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24776245_24777000_24777097_24778419
ENSMUSG00000028953.11_24778594_24779261_1	chr5	-	278	2	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	3204	8251	3204	-8251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGGAGTGTGAAAAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	24779261	24778593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24778775_24779164
ENSMUSG00000028953.11_24778738_24781555_1	chr5	-	289	3	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	910	8395	910	-8395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCCCATCCCAGAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	24781555	24778737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24778775_24779164_24779378_24781516
ENSMUSG00000028953.11_24779259_24781691_1	chr5	-	294	2	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	774	8916	774	-8916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTACCTTTCATGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	24781691	24779258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24779378_24781516
ENSMUSG00000028954.12_24890822_24914052_1	chr5	+	1945	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	0	1324	0	-1322	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGGAGCACGAGGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	24890821	24914052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ENSMUSG00000028955.4_151132946_151134502_1	chr4	-	609	2	ISM	ENSMUSG00000028955.4	ENSMUST00000030797.4	2120	5	7908	1189	7908	-1189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGGTGAAGAGCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	151134502	151132945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_151133504_151134451
ENSMUSG00000028955.4_151133232_151142403_1	chr4	-	638	5	FSM	ENSMUSG00000028955.4	ENSMUST00000030797.4	2120	5	7	1475	7	-1475	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTGCTGAATGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	151142403	151133231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_151133504_151134451_151134504_151135373_151135533_151140618_151140701_151142330
ENSMUSG00000028958.16_24650693_24651663_1	chr5	-	711	2	ISM	ENSMUSG00000028958.16	ENSMUST00000115036.8	1455	3	652	229	287	-218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCAGTGGGCTCTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	24651663	24650692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24651272_24651531
ENSMUSG00000028958.16_24650906_24651814_1	chr5	-	649	2	ISM	ENSMUSG00000028958.16	ENSMUST00000115036.8	1455	3	501	442	136	-431	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCAGTGTAGCCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	24651814	24650905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24651272_24651531
ENSMUSG00000028958.16_24650906_24652789_1	chr5	-	820	3	FSM	ENSMUSG00000028958.16	ENSMUST00000030799.15	1333	3	63	450	63	-431	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCAGTGTAGCCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	24652789	24650905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_24651272_24651531_24651951_24652754
ENSMUSG00000028958.16_24651047_24652103_1	chr5	-	676	3	NNC	ENSMUSG00000028958.16	novel	1455	3	NA	NA	-153	-572	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCTCCTGCTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	24652103	24651046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_24651272_24651531_24651951_24652071
ENSMUSG00000028958.16_24651152_24652155_1	chr5	-	623	3	NNC	ENSMUSG00000028958.16	novel	1455	3	NA	NA	160	-677	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCCACGAGAGTCGGTC	NA	NA	NA	NA	NA	NA	NA	NA	24652155	24651151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_24651272_24651531_24651951_24652071
ENSMUSG00000028958.16_24651189_24652180_1	chr5	-	606	3	ISM	ENSMUSG00000028958.16	ENST00000392818.7	1533	4	41336	725	135	-714	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCACCTGCCCCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	24652180	24651188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24651272_24651531_24651951_24652076
ENSMUSG00000028958.16_24651240_24652315_1	chr5	-	690	3	ISM	ENSMUSG00000028958.16	ENST00000392818.7	1533	4	41201	776	0	-765	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCATCTACCAAGGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	24652315	24651239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_24651272_24651531_24651951_24652076
ENSMUSG00000028959.15_24646037_24650236_1	chr5	-	1836	10	NNC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	24650236	24646036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648900_24649304_24650063
ENSMUSG00000028959.15_24646037_24650236_2	chr5	-	1837	10	NNC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1080	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	24650236	24646036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648135_24648274_24648455_24648892_24649304_24650063
ENSMUSG00000028959.15_24646037_24650236_3	chr5	-	1837	10	NNC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	24650236	24646036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646815_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
ENSMUSG00000028959.15_24646037_24650285_1	chr5	-	1888	10	NNC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	24650285	24646036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650068
ENSMUSG00000028960.21_149483213_149510482_1	chr4	-	174	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	-40	70019	-40	-69464	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGACAGACCTCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	149510482	149483212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149483243_149510338
ENSMUSG00000028961.16_149234448_149235339_1	chr4	-	803	2	ISM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	15825	0	15825	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTCTTTGTTTCTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	149235339	149234447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149235221_149235309
ENSMUSG00000028961.16_149234619_149235596_1	chr4	-	752	3	ISM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	15568	171	15568	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCCAAATAAAACAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	149235596	149234618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149235221_149235309_149235433_149235569
ENSMUSG00000028961.16_149234750_149238354_1	chr4	-	728	4	ISM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	12810	302	12810	-302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTCAGTGAAGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	149238354	149234749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320
ENSMUSG00000028961.16_149234799_149238407_1	chr4	-	732	4	ISM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	12757	351	12757	-351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATCGTACAACCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	149238407	149234798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320
ENSMUSG00000028961.16_149234856_149238454_1	chr4	-	722	4	ISM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	12710	408	12710	-408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGCCATGTGGACCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	149238454	149234855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320
ENSMUSG00000028961.16_149235063_149241253_1	chr4	-	836	6	ISM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	9911	615	9911	-615	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGTGGCGCTCAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	149241253	149235062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063
ENSMUSG00000028961.16_149235178_149242465_1	chr4	-	769	7	ISM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	8699	730	8699	-730	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACCGGGAGAATTTATC	NA	NA	NA	NA	NA	NA	NA	NA	149242465	149235177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417
ENSMUSG00000028961.16_149235374_149244585_1	chr4	-	819	7	ISM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	6579	926	6579	-926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTACTGCCCTCTCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	149244585	149235373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515
ENSMUSG00000028961.16_149235602_149245350_1	chr4	-	787	7	ISM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	5814	1154	5814	-1154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTTAAGTCAGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	149245350	149235601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515_149244586_149245291
ENSMUSG00000028961.16_149238321_149245410_1	chr4	-	771	6	NNC	ENSMUSG00000028961.16	novel	2218	13	NA	NA	5754	-3873	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTAAGAGGCGAACCCG	NA	NA	NA	NA	NA	NA	NA	NA	149245410	149238320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244523_149244586_149245291
ENSMUSG00000028961.16_149238321_149246151_1	chr4	-	845	7	ISM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	5013	3873	5013	-3873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTAAGAGGCGAACCCG	NA	NA	NA	NA	NA	NA	NA	NA	149246151	149238320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085
ENSMUSG00000028961.16_149241063_149250539_1	chr4	-	837	7	ISM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	625	6615	625	-6615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATGGCAGCTTTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	149250539	149241062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463
ENSMUSG00000028961.16_149241198_149251117_1	chr4	-	776	8	ISM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	47	6750	47	-6750	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTCTCAAGTACCGGG	NA	NA	NA	NA	NA	NA	NA	NA	149251117	149241197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
ENSMUSG00000028962.15_24634877_24636618_1	chr5	+	520	4	ISM	ENSMUSG00000028962.15	ENSMUST00000115047.3	4264	22	1456	9327	1456	-9327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACACCTCGGGCACGGCC	NA	NA	NA	NA	NA	NA	NA	NA	24634876	24636618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24634947_24635028_24635148_24636206_24636440_24636520
ENSMUSG00000028962.15_24639151_24639966_1	chr5	+	504	4	ISM	ENSMUSG00000028962.15	ENSMUST00000115047.3	4264	22	5730	5979	5730	-5979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTACCATGAGATCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	24639150	24639966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24639238_24639335_24639502_24639632_24639748_24639830
ENSMUSG00000028962.15_24639414_24640235_1	chr5	+	511	4	ISM	ENSMUSG00000028962.15	ENSMUST00000115047.3	4264	22	5993	5710	5993	-5710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGCCCATTTCCAACG	NA	NA	NA	NA	NA	NA	NA	NA	24639413	24640235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24639502_24639632_24639748_24639830_24640016_24640112
ENSMUSG00000028962.15_24639888_24640698_1	chr5	+	510	3	ISM	ENSMUSG00000028962.15	ENSMUST00000115047.3	4264	22	6467	5247	6467	-5247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTATTTTCATCTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	24639887	24640698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24640016_24640112_24640339_24640542
ENSMUSG00000028962.15_24640250_24641127_1	chr5	+	507	4	ISM	ENSMUSG00000028962.15	ENSMUST00000115047.3	4264	22	6829	4818	6829	-4818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGGTGTTCCTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	24640249	24641127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24640339_24640542_24640759_24640839_24640989_24641074
ENSMUSG00000028962.15_24640698_24643780_1	chr5	+	493	4	ISM	ENSMUSG00000028962.15	ENSMUST00000115047.3	4264	22	7277	2165	7277	-2165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCATACTGGTACCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	24640697	24643780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24640759_24640839_24640989_24641074_24641270_24643692
ENSMUSG00000028962.15_24640880_24643895_1	chr5	+	507	3	ISM	ENSMUSG00000028962.15	ENSMUST00000115047.3	4264	22	7459	2050	7459	-2050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCCTTCTTCCTGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	24640879	24643895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24640989_24641074_24641270_24643692
ENSMUSG00000028962.15_24641147_24644272_1	chr5	+	511	4	ISM	ENSMUSG00000028962.15	ENSMUST00000115047.3	4264	22	7726	1673	7726	-1673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGGGCTGGGTCATCAAC	NA	NA	NA	NA	NA	NA	NA	NA	24641146	24644272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24641270_24643692_24643948_24644053_24644144_24644229
ENSMUSG00000028962.15_24643771_24644789_1	chr5	+	489	4	ISM	ENSMUSG00000028962.15	ENSMUST00000115047.3	4264	22	10350	1156	10350	-1156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTTGCTCATTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	24643770	24644789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24643948_24644053_24644144_24644229_24644397_24644734
ENSMUSG00000028962.15_24643870_24644907_1	chr5	+	508	4	ISM	ENSMUSG00000028962.15	ENSMUST00000115047.3	4264	22	10449	1038	10449	-1038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGCACCTGGGGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	24643869	24644907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24643948_24644053_24644144_24644229_24644397_24644734
ENSMUSG00000028962.15_24644905_24645731_1	chr5	+	490	4	ISM	ENSMUSG00000028962.15	ENSMUST00000115047.3	4264	22	11484	214	11484	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCCATGCCTGTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	24644904	24645731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24644989_24645078_24645249_24645401_24645576_24645669
ENSMUSG00000028964.15_150981590_150994298_1	chr4	-	817	7	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	85	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	4701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	150994298	150981589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_150981929_150985464_150985552_150988277_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ENSMUSG00000028964.15_150981693_150994383_1	chr4	-	805	7	FSM	ENSMUSG00000028964.15	ENSMUST00000030805.14	908	7	0	103	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGTATGTGAAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	150994383	150981692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ENSMUSG00000028964.15_150981693_150994383_2	chr4	-	799	7	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGTATGTGAAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	150994383	150981692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_150981929_150985464_150985552_150988277_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ENSMUSG00000028964.15_150985467_150991599_1	chr4	-	258	3	ISM	ENSMUSG00000028964.15	ENST00000377493.9	353	4	1271	0	1271	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGAGTATATCCCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	150991599	150985466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_150985552_150988271_150988342_150991496
ENSMUSG00000028967.11_150939530_150951269_1	chr4	+	968	4	FSM	ENSMUSG00000028967.11	ENSMUST00000030811.2	3043	4	0	2075	0	-158	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACCCAAACCCTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	150939529	150951269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_150939729_150949531_150949727_150949820_150949898_150950772
ENSMUSG00000028967.11_150939672_150951221_1	chr4	+	701	3	FSM	ENSMUSG00000028967.11	ENST00000469499.5	948	3	41	206	41	-206	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGTGGCAGATCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	150939671	150951221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_150939729_150949531_150949727_150950772
ENSMUSG00000028967.11_150939682_150951259_1	chr4	+	727	3	NNC	ENSMUSG00000028967.11	novel	948	3	NA	NA	51	-168	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTTGTTCCAGACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	150939681	150951259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_150939729_150949531_150949727_150950774
ENSMUSG00000028967.11_150939712_150951286_1	chr4	+	726	3	FSM	ENSMUSG00000028967.11	ENST00000469499.5	948	3	81	141	81	-141	multi-exon	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACCTCAAAGCCATCGCA	NA	NA	NA	NA	NA	NA	NA	NA	150939711	150951286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_150939729_150949531_150949727_150950772
ENSMUSG00000028967.11_150949590_150951427_1	chr4	+	869	3	ISM	ENSMUSG00000028967.11	ENSMUST00000030811.2	3043	4	10060	1917	9959	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCCTATACCTCCTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	150949589	150951427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_150949727_150949820_150949898_150950772
ENSMUSG00000028967.11_150949650_150951427_1	chr4	+	732	2	ISM	ENSMUSG00000028967.11	ENST00000469499.5	948	3	10019	0	10019	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCCTATACCTCCTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	150949649	150951427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_150949727_150950772
ENSMUSG00000028967.11_150949835_150951592_1	chr4	+	883	2	ISM	ENSMUSG00000028967.11	ENSMUST00000030811.2	3043	4	10305	1752	10204	165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAATGGGGTCATGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	150949834	150951592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_150949898_150950772
ENSMUSG00000028969.11_24623239_24627388_1	chr5	-	1764	8	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	1095	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGAAGCCAACCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	24627388	24623238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_24624461_24624597_24624679_24624780_24624834_24625245_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329
ENSMUSG00000028969.11_24623410_24627715_1	chr5	-	1722	10	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	768	-171	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCTTCTTAGATTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	24627715	24623409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_24624461_24624597_24624679_24624780_24624834_24625245_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645
ENSMUSG00000028969.11_24623612_24628490_1	chr5	-	1651	12	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-7	-373	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGGTTGGAAAGGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	24628490	24623611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_24624461_24624597_24624679_24624780_24624834_24625245_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
ENSMUSG00000028973.19_24599153_24606055_1	chr5	+	1073	5	ISM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	0	8888	0	-8888	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAAGCTTGTCATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	24599152	24606055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972
ENSMUSG00000028973.19_24607076_24613743_1	chr5	+	983	9	ISM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	7923	1200	7923	-1200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCCCACCGGCTTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	24607075	24613743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565
ENSMUSG00000028973.19_24608112_24614459_1	chr5	+	972	8	ISM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	8959	484	8959	-484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACCCCAAAAGCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	24608111	24614459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
ENSMUSG00000028973.19_24611120_24614585_1	chr5	+	995	6	ISM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	11967	358	11967	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTGCACTACTGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	24611119	24614585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
ENSMUSG00000028973.19_24611175_24614644_1	chr5	+	999	6	ISM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	12022	299	12022	-299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCCCACCTGCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	24611174	24614644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
ENSMUSG00000028973.19_24611679_24614804_1	chr5	+	973	4	ISM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	12526	139	12526	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTAGAATGGGTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	24611678	24614804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24611800_24612305_24612454_24613565_24613817_24614351
ENSMUSG00000028974.14_149190665_149202889_1	chr4	+	1100	4	ISM	ENSMUSG00000028974.14	ENSMUST00000103216.10	1835	5	2062	438	2062	-438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAAGATCAGCACTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	149190664	149202889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_149190771_149192225_149192369_149201864_149202055_149202228
ENSMUSG00000028975.17_149046181_149050736_1	chr4	-	221	3	ISM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	133597	1189	133597	-1189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGCCCTGCGGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	149050736	149046180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149046252_149047898_149047991_149050678
ENSMUSG00000028975.17_149068562_149184266_1	chr4	-	232	4	ISM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	67	23570	67	-23570	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCCCTGGGCCCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	149184266	149068561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149068623_149126177_149126263_149160476_149160525_149184228
ENSMUSG00000028980.15_150064398_150068429_1	chr4	-	3051	2	ISM	ENSMUSG00000028980.15	ENSMUST00000084117.13	4571	5	19158	466	19158	-466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGTGTCACCATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	150068429	150064397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_150067379_150068359
ENSMUSG00000028980.15_150064681_150079016_1	chr4	-	3059	3	ISM	ENSMUSG00000028980.15	ENSMUST00000084117.13	4571	5	8571	749	8571	-749	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCCCTGGGGTCCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	150079016	150064680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_150067379_150068359_150068630_150078925
ENSMUSG00000028980.15_150065112_150080600_1	chr4	-	3054	4	ISM	ENSMUSG00000028980.15	ENSMUST00000084117.13	4571	5	6987	1180	6987	-1180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTACAGGCAGCTCCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	150080600	150065111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_150067379_150068359_150068630_150078925_150079044_150080201
ENSMUSG00000028980.15_150065526_150093480_1	chr4	-	3151	5	FSM	ENSMUSG00000028980.15	ENSMUST00000030830.4	4745	5	0	1594	0	-1594	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCAGCGCTCCTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	150093480	150065525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_150067379_150068359_150068630_150078925_150079044_150080201_150080839_150093207
ENSMUSG00000028982.10_149829033_149833579_1	chr4	-	436	2	ISM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	25155	540	25155	-540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGAAATTCATTAACGTT	NA	NA	NA	NA	NA	NA	NA	NA	149833579	149829032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149829395_149833505
ENSMUSG00000028982.10_149829097_149833639_1	chr4	-	432	2	ISM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	25095	604	25095	-604	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCATAGAATACCTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	149833639	149829096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149829395_149833505
ENSMUSG00000028982.10_149833722_149846948_1	chr4	-	436	5	ISM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	11786	5229	11786	-5229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCGGCTTCTATAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	149846948	149833721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823
ENSMUSG00000028982.10_149838304_149858572_1	chr4	-	427	4	ISM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	162	9811	162	-9811	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTGCCTAATAGCAATACT	NA	NA	NA	NA	NA	NA	NA	NA	149858572	149838303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149838357_149840531_149840610_149846823_149847004_149858456
ENSMUSG00000028986.13_24305646_24362014_1	chr5	+	1411	9	ISM	ENSMUSG00000028986.13	ENSMUST00000163409.5	2857	10	25	3776	25	-3769	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGGAAGCTTAGGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	24305645	24362014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24305873_24331819_24331923_24332666_24332761_24332977_24333103_24339961_24340138_24343303_24343479_24346148_24346292_24354122_24354364_24361887
ENSMUSG00000028986.13_24305646_24362080_1	chr5	+	1477	9	ISM	ENSMUSG00000028986.13	ENSMUST00000163409.5	2857	10	25	3710	25	-3703	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGAAACGTATGTATCTA	NA	NA	NA	NA	NA	NA	NA	NA	24305645	24362080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24305873_24331819_24331923_24332666_24332761_24332977_24333103_24339961_24340138_24343303_24343479_24346148_24346292_24354122_24354364_24361887
ENSMUSG00000028986.13_24305829_24363589_1	chr5	+	1356	10	ISM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	226	2194	208	-2194	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGAAGGACAAGATATTT	NA	NA	NA	NA	NA	NA	NA	NA	24305828	24363589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24305873_24331819_24331923_24332666_24332761_24332977_24333103_24339961_24340138_24343303_24343479_24346148_24346292_24354122_24354364_24361887_24362090_24363536
ENSMUSG00000028986.13_24331850_24364506_1	chr5	+	1389	10	ISM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	26247	1277	26229	-1277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATGGAGGGGTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	24331849	24364506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24331923_24332666_24332761_24332977_24333103_24339961_24340138_24343303_24343479_24346148_24346292_24354122_24354364_24361887_24362090_24363536_24363635_24364444
ENSMUSG00000028986.13_24333053_24364754_1	chr5	+	1395	8	ISM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	27450	1029	27432	-1029	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTAGAGATATGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	24333052	24364754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24333103_24339961_24340138_24343303_24343479_24346148_24346292_24354122_24354364_24361887_24362090_24363536_24363635_24364444
ENSMUSG00000028986.13_24340090_24364931_1	chr5	+	1394	7	ISM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	34487	852	34469	-852	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAAAGTTACAAGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	24340089	24364931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24340138_24343303_24343479_24346148_24346292_24354122_24354364_24361887_24362090_24363536_24363635_24364444
ENSMUSG00000028986.13_24343466_24365106_1	chr5	+	1359	6	ISM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	37863	677	37845	-677	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCGTATGAATTATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	24343465	24365106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24343479_24346148_24346292_24354122_24354364_24361887_24362090_24363536_24363635_24364444
ENSMUSG00000028986.13_24346230_24365227_1	chr5	+	1386	5	ISM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	40627	556	40609	-556	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGGCTTAAACATACAC	NA	NA	NA	NA	NA	NA	NA	NA	24346229	24365227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24346292_24354122_24354364_24361887_24362090_24363536_24363635_24364444
ENSMUSG00000028986.13_24354188_24365336_1	chr5	+	1368	4	ISM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	48585	447	48567	-447	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACATTTTTGTATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	24354187	24365336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24354364_24361887_24362090_24363536_24363635_24364444
ENSMUSG00000028986.13_24354260_24365434_1	chr5	+	1394	4	ISM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	48657	349	48639	-349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAGAGCCAATCAGTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	24354259	24365434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24354364_24361887_24362090_24363536_24363635_24364444
ENSMUSG00000028986.13_24362014_24365645_1	chr5	+	1375	3	ISM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	56411	138	56393	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTTATGTGGACAACA	NA	NA	NA	NA	NA	NA	NA	NA	24362013	24365645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24362090_24363536_24363635_24364444
ENSMUSG00000028986.13_24363537_24365782_1	chr5	+	1436	2	ISM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	57934	1	57916	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGATTTGCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	24363536	24365782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24363635_24364444
ENSMUSG00000028988.14_149602693_149650343_1	chr4	+	2123	5	FSM	ENSMUSG00000028988.14	ENSMUST00000030839.13	2674	5	0	551	0	-551	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGACGGTTCAAGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	149602692	149650343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_149602837_149624285_149624371_149630167_149630289_149630858_149630950_149648661
ENSMUSG00000028988.14_149602693_149650513_1	chr4	+	2293	5	FSM	ENSMUSG00000028988.14	ENSMUST00000030839.13	2674	5	0	381	0	-381	multi-exon	FALSE	canonical	NA	NA	NA	NA	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGAGAGGAGAGCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	149602692	149650513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_149602837_149624285_149624371_149630167_149630289_149630858_149630950_149648661
ENSMUSG00000028988.14_149624283_149650513_1	chr4	+	2152	4	ISM	ENSMUSG00000028988.14	ENSMUST00000030839.13	2674	5	21590	381	-5291	-381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGAGAGGAGAGCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	149624282	149650513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_149624371_149630167_149630289_149630858_149630950_149648661
ENSMUSG00000028988.14_149630859_149650617_1	chr4	+	2047	2	ISM	ENSMUSG00000028988.14	ENSMUST00000105692.2	634	4	1285	-1652	1285	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTGGAGATGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	149630858	149650617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_149630950_149648661
ENSMUSG00000028988.14_149630892_149650696_1	chr4	+	2093	2	ISM	ENSMUSG00000028988.14	ENSMUST00000105692.2	634	4	1318	-1731	1318	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGGTGTTGCCAGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	149630891	149650696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_149630950_149648661
ENSMUSG00000028988.14_149630930_149650767_1	chr4	+	2126	2	ISM	ENSMUSG00000028988.14	ENSMUST00000105692.2	634	4	1356	-1802	1356	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTAGCAGTGGTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	149630929	149650767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_149630950_149648661
ENSMUSG00000028990.14_149569751_149581125_1	chr4	+	1810	7	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTCTATGAAAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	149569750	149581125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578195_149578271_149580536
ENSMUSG00000028992.14_149552645_149559014_1	chr4	-	1909	3	ISM	ENSMUSG00000028992.14	ENSMUST00000119921.8	2657	4	10645	616	10615	371	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATGGCAGCTCTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	149559014	149552644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149554240_149557741_149557926_149558884
ENSMUSG00000029001.16_148237879_148243270_1	chr4	-	830	5	FSM	ENSMUSG00000029001.16	ENST00000376768.5	818	5	-10	-2	-10	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCAGACCTCATTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	148243270	148237878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_148238102_148240602_148240739_148240851_148240948_148241065_148241164_148242993
ENSMUSG00000029001.16_148237879_148245015_1	chr4	-	843	5	FSM	ENSMUSG00000029001.16	ENST00000251546.8	933	5	92	-2	92	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCAGACCTCATTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	148245015	148237878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_148238102_148240602_148240739_148241065_148241164_148242993_148243270_148244905
ENSMUSG00000029001.16_148237994_148245015_1	chr4	-	728	5	FSM	ENSMUSG00000029001.16	ENST00000251546.8	933	5	92	113	92	-113	multi-exon	FALSE	canonical	NA	NA	NA	NA	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCAGCATCACCATCGG	NA	NA	NA	NA	NA	NA	NA	NA	148245015	148237993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_148238102_148240602_148240739_148241065_148241164_148242993_148243270_148244905
ENSMUSG00000029003.12_148215271_148228099_1	chr4	+	499	5	ISM	ENSMUSG00000029003.12	ENST00000376667.7	805	8	44	1554	44	-1554	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTGTCACCCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	148215270	148228099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148215428_148225241_148225292_148225371_148225491_148227442_148227515_148227998
ENSMUSG00000029003.12_148215372_148229185_2	chr4	+	568	7	ISM	ENSMUSG00000029003.12	ENST00000376667.7	805	8	145	468	0	-468	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTCAGGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	148215371	148229185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148215428_148225241_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110
ENSMUSG00000029003.12_148225219_148229653_1	chr4	+	627	7	ISM	ENSMUSG00000029003.12	ENSMUST00000030860.9	1535	8	580	503	19	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1004	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGTCAGGGGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	148225218	148229653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560
ENSMUSG00000029003.12_148225370_148229653_1	chr4	+	551	6	NNC	ENSMUSG00000029003.12	novel	805	8	NA	NA	170	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGTCAGGGGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	148225369	148229653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_148225491_148227442_148227515_148227998_148228100_148228725_148228816_148229110_148229185_148229560
ENSMUSG00000029003.12_148229108_148229908_1	chr4	+	250	3	ISM	ENSMUSG00000029003.12	ENSMUST00000030860.9	1535	8	4469	248	3908	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCCAGCCCGGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	148229107	148229908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148229185_148229560_148229654_148229828
ENSMUSG00000029004.16_23639602_23678579_1	chr5	+	951	7	ISM	ENSMUSG00000029004.16	ENSMUST00000094962.9	7252	26	163	30654	155	-30654	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCCAAGGTTACTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	23639601	23678579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_23639782_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478
ENSMUSG00000029004.16_23668055_23683920_1	chr5	+	957	8	ISM	ENSMUSG00000029004.16	ENSMUST00000115128.8	7317	27	28608	25313	28608	-25313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAGAGGGAAGTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	23668054	23683920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850
ENSMUSG00000029004.16_23669725_23686308_1	chr5	+	1022	8	ISM	ENSMUSG00000029004.16	ENSMUST00000115128.8	7317	27	30278	22925	30278	-22925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCGAATGCAGAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	23669724	23686308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850_23683982_23686206
ENSMUSG00000029004.16_23690366_23701206_1	chr5	+	1040	5	ISM	ENSMUSG00000029004.16	ENSMUST00000115128.8	7317	27	50919	8027	50919	-8027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTGAAAACATTTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	23690365	23701206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_23690610_23691299_23691399_23697265_23697431_23698196_23698506_23700983
ENSMUSG00000029004.16_23690547_23701461_1	chr5	+	951	6	ISM	ENSMUSG00000029004.16	ENSMUST00000115128.8	7317	27	51100	7772	51100	-7772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGTCAGGAAAGATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	23690546	23701461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_23690610_23691299_23691399_23697265_23697431_23698196_23698506_23700983_23701239_23701401
ENSMUSG00000029004.16_23697419_23702133_1	chr5	+	885	5	ISM	ENSMUSG00000029004.16	ENSMUST00000115128.8	7317	27	57972	7100	57972	-7100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTTACAGAAATGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	23697418	23702133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_23697431_23698196_23698506_23700983_23701239_23701401_23701547_23701969
ENSMUSG00000029004.16_23698297_23702791_1	chr5	+	983	6	ISM	ENSMUSG00000029004.16	ENSMUST00000115128.8	7317	27	58850	6442	58850	-6442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCCTGCAAGAAATAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	23698296	23702791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_23698506_23700983_23701239_23701401_23701547_23701969_23702221_23702536_23702594_23702725
ENSMUSG00000029004.16_23701985_23704372_1	chr5	+	953	4	ISM	ENSMUSG00000029004.16	ENSMUST00000115128.8	7317	27	62538	4861	62538	-4861	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGTGGGAGCCTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	23701984	23704372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_23702221_23702536_23702594_23702725_23703293_23704279
ENSMUSG00000029004.16_23702120_23704503_1	chr5	+	949	4	ISM	ENSMUSG00000029004.16	ENSMUST00000115128.8	7317	27	62673	4730	62673	-4730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGTGCCTCTTCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	23702119	23704503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_23702221_23702536_23702594_23702725_23703293_23704279
ENSMUSG00000029004.16_23702834_23705528_1	chr5	+	939	4	ISM	ENSMUSG00000029004.16	ENSMUST00000115128.8	7317	27	63387	3705	63387	-3705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACGCTCAGAGCCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	23702833	23705528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_23703293_23704279_23704591_23705253_23705343_23705448
ENSMUSG00000029004.16_23703044_23706609_1	chr5	+	949	6	ISM	ENSMUSG00000029004.16	ENSMUST00000115128.8	7317	27	63597	2624	63597	-2624	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGAAGCTGACAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	23703043	23706609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_23703293_23704279_23704591_23705253_23705343_23705448_23705575_23705724_23705811_23706521
ENSMUSG00000029004.16_23704426_23707001_1	chr5	+	946	5	ISM	ENSMUSG00000029004.16	ENSMUST00000115128.8	7317	27	64979	2232	64979	-2232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTTATTTACCCAGACACC	NA	NA	NA	NA	NA	NA	NA	NA	23704425	23707001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_23704591_23705253_23705343_23705448_23705575_23705724_23705811_23706521
ENSMUSG00000029004.16_23704460_23707086_1	chr5	+	997	5	ISM	ENSMUSG00000029004.16	ENSMUST00000115128.8	7317	27	65013	2147	65013	-2147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTCCCCCTCCTCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	23704459	23707086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_23704591_23705253_23705343_23705448_23705575_23705724_23705811_23706521
ENSMUSG00000029007.9_148163862_148166095_1	chr4	-	1276	2	ISM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	6393	2344	6328	2170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGAGGGAGGTAGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	148166095	148163861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148165062_148166019
ENSMUSG00000029007.9_148164054_148166828_1	chr4	-	1305	3	ISM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	5660	2536	5595	1978	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTGAAAGGACTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	148166828	148164053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148165062_148166019_148166216_148166727
ENSMUSG00000029007.9_148164191_148172488_1	chr4	-	1323	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	0	2673	0	1841	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGGTGACTCCCTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	148172488	148164190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
ENSMUSG00000029009.18_148125648_148140052_1	chr4	+	2116	12	FSM	ENSMUSG00000029009.18	ENSMUST00000069604.15	6072	12	0	3956	0	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	1391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTCAACAGGCACACCAT	NA	NA	NA	NA	NA	NA	NA	NA	148125647	148140052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_148125779_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ENSMUSG00000029009.18_148125648_148140052_2	chr4	+	2106	12	NNC	ENSMUSG00000029009.18	novel	6072	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTCAACAGGCACACCAT	NA	NA	NA	NA	NA	NA	NA	NA	148125647	148140052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_148125779_148126040_148126287_148127881_148128121_148128900_148129012_148132539_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ENSMUSG00000029009.18_148125648_148140052_3	chr4	+	2110	12	NNC	ENSMUSG00000029009.18	novel	6072	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTCAACAGGCACACCAT	NA	NA	NA	NA	NA	NA	NA	NA	148125647	148140052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_148125779_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138133_148139441_148139562_148139829
ENSMUSG00000029009.18_148125648_148140052_4	chr4	+	2105	12	NNC	ENSMUSG00000029009.18	novel	6072	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	831	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTCAACAGGCACACCAT	NA	NA	NA	NA	NA	NA	NA	NA	148125647	148140052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_148125779_148126051_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ENSMUSG00000029009.18_148125648_148140052_5	chr4	+	2110	12	NNC	ENSMUSG00000029009.18	novel	6072	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTCAACAGGCACACCAT	NA	NA	NA	NA	NA	NA	NA	NA	148125647	148140052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_148125779_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139835
ENSMUSG00000029009.18_148125648_148140052_6	chr4	+	2109	12	NNC	ENSMUSG00000029009.18	novel	6072	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTCAACAGGCACACCAT	NA	NA	NA	NA	NA	NA	NA	NA	148125647	148140052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_148125779_148126040_148126287_148127881_148128121_148128900_148129005_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ENSMUSG00000029009.18_148125744_148140052_1	chr4	+	2020	12	FSM	ENSMUSG00000029009.18	ENSMUST00000069604.15	6072	12	96	3956	76	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTCAACAGGCACACCAT	NA	NA	NA	NA	NA	NA	NA	NA	148125743	148140052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_148125779_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ENSMUSG00000029012.12_22691829_22705009_1	chr5	-	423	2	ISM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	50364	342	50364	-342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGCTTTGAACGTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	22705009	22691828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22692216_22704973
ENSMUSG00000029012.12_22691942_22721745_1	chr5	-	431	3	ISM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	33628	455	33628	-455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACAGCAGGGTTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	22721745	22691941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22692216_22704973_22705087_22721701
ENSMUSG00000029012.12_22692145_22728591_1	chr5	-	421	5	ISM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	26782	658	26782	-658	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTGACAATGACTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	22728591	22692144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513
ENSMUSG00000029012.12_22705028_22731416_1	chr5	-	440	6	ISM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	23957	13541	23957	-13541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGCCAAAATACAAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	22731416	22705027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360
ENSMUSG00000029012.12_22727389_22734242_1	chr5	-	444	6	ISM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	21131	35902	21131	-35902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCATGTTTAAATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	22734242	22727388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152
ENSMUSG00000029012.12_22729812_22738872_1	chr5	-	438	5	ISM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	16501	38325	16501	-38325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCAACCCTGTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	22738872	22729811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760
ENSMUSG00000029012.12_22731406_22742583_1	chr5	-	402	5	ISM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	12790	39919	12790	-39919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGAAGAAGGCAATGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	22742583	22731405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519
ENSMUSG00000029012.12_22734166_22751502_1	chr5	-	412	4	ISM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	3871	42679	3871	-42679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGACACCTGGTGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	22751502	22734165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22734284_22738760_22738873_22742519_22742595_22751395
ENSMUSG00000029012.12_22734215_22751556_1	chr5	-	417	4	ISM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	3817	42728	3817	-42728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACATTCTCCTTGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	22751556	22734214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22734284_22738760_22738873_22742519_22742595_22751395
ENSMUSG00000029012.12_22738789_22752975_1	chr5	-	414	4	ISM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	2398	47302	2398	-47302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTATATTTCCCTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	22752975	22738788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22738873_22742519_22742595_22751395_22751597_22752921
ENSMUSG00000029014.15_21962265_21990249_1	chr5	-	2126	17	NNC	ENSMUSG00000029014.15	novel	2133	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTATAGTCATCATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	21990249	21962264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986388_21988044_21988236_21989986
ENSMUSG00000029014.15_21962265_21990249_2	chr5	-	2128	17	NNC	ENSMUSG00000029014.15	novel	2133	17	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTATAGTCATCATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	21990249	21962264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971699_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ENSMUSG00000029014.15_21966669_21973685_1	chr5	-	369	4	ISM	ENSMUSG00000029014.15	ENST00000249270.11	1826	15	16403	4417	16403	-4389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCGGCAAGCATCCAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	21973685	21966668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_21966724_21971553_21971704_21973434_21973557_21973643
ENSMUSG00000029015.10_22016016_22024786_1	chr5	-	958	7	ISM	ENSMUSG00000029015.10	ENST00000432958.6	2355	17	27581	46	27581	-46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATAGCACGATGCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	22024786	22016015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22016340_22018322_22018378_22018851_22019053_22019894_22020003_22020665_22020759_22021936_22022007_22024679
ENSMUSG00000029015.10_22016016_22026104_1	chr5	-	1036	8	ISM	ENSMUSG00000029015.10	ENST00000432958.6	2355	17	26263	46	26263	-46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATAGCACGATGCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	22026104	22016015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22016340_22018322_22018378_22018851_22019053_22019894_22020003_22020665_22020759_22021936_22022007_22024679_22024787_22026026
ENSMUSG00000029015.10_22016147_22028474_1	chr5	-	1046	10	ISM	ENSMUSG00000029015.10	ENST00000432958.6	2355	17	23893	177	23893	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCCTGTATGGGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	22028474	22016146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22016340_22018322_22018378_22018851_22019053_22019894_22020003_22020665_22020759_22021936_22022007_22024679_22024787_22026026_22026105_22026992_22027107_22028447
ENSMUSG00000029015.10_22016271_22028531_1	chr5	-	979	10	ISM	ENSMUSG00000029015.10	ENST00000432958.6	2355	17	23836	301	23836	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTATCCACGATGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	22028531	22016270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22016340_22018322_22018378_22018851_22019053_22019894_22020003_22020665_22020759_22021936_22022007_22024679_22024787_22026026_22026105_22026992_22027107_22028447
ENSMUSG00000029015.10_22018323_22036527_1	chr5	-	1057	10	ISM	ENSMUSG00000029015.10	ENST00000432958.6	2355	17	15840	2353	15840	-2353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATACCTTAGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	22036527	22018322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22018378_22018851_22019053_22019894_22020003_22020665_22020759_22021936_22022007_22024679_22024787_22026026_22026105_22026992_22027107_22028447_22028596_22036444
ENSMUSG00000029015.10_22018933_22039253_1	chr5	-	960	10	ISM	ENSMUSG00000029015.10	ENST00000432958.6	2355	17	13114	2963	13114	-2963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAAATGTCCACACTGT	NA	NA	NA	NA	NA	NA	NA	NA	22039253	22018932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22019053_22019894_22020003_22020665_22020759_22021936_22022007_22024679_22024787_22026026_22026105_22026992_22027107_22028447_22028596_22036444_22036528_22039214
ENSMUSG00000029015.10_22018983_22039309_1	chr5	-	966	10	ISM	ENSMUSG00000029015.10	ENST00000432958.6	2355	17	13058	3013	13058	-3013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTCATCAAAACAACATTT	NA	NA	NA	NA	NA	NA	NA	NA	22039309	22018982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22019053_22019894_22020003_22020665_22020759_22021936_22022007_22024679_22024787_22026026_22026105_22026992_22027107_22028447_22028596_22036444_22036528_22039214
ENSMUSG00000029015.10_22019037_22039367_1	chr5	-	970	10	ISM	ENSMUSG00000029015.10	ENST00000432958.6	2355	17	13000	3067	13000	-3067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAATGCTACAAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	22039367	22019036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22019053_22019894_22020003_22020665_22020759_22021936_22022007_22024679_22024787_22026026_22026105_22026992_22027107_22028447_22028596_22036444_22036528_22039214
ENSMUSG00000029015.10_22019894_22042314_1	chr5	-	1050	10	ISM	ENSMUSG00000029015.10	ENST00000432958.6	2355	17	10053	3924	10053	-3924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCGGTCTGCATGGCATC	NA	NA	NA	NA	NA	NA	NA	NA	22042314	22019893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22020003_22020665_22020759_22021936_22022007_22024679_22024787_22026026_22026105_22026992_22027107_22028447_22028596_22036444_22036528_22039214_22039368_22042219
ENSMUSG00000029015.10_22020748_22042926_1	chr5	-	977	10	ISM	ENSMUSG00000029015.10	ENST00000432958.6	2355	17	9441	4778	9441	-4778	internal_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTGGAATAAAAATATTCC	NA	NA	NA	NA	NA	NA	NA	NA	22042926	22020747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22020759_22021936_22022007_22024679_22024787_22026026_22026105_22026992_22027107_22028447_22028596_22036444_22036528_22039214_22039368_22042219_22042385_22042878
ENSMUSG00000029015.10_22024731_22045582_1	chr5	-	983	9	ISM	ENSMUSG00000029015.10	ENST00000432958.6	2355	17	6785	8761	6785	-8761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTACCGCCGTGATCATTG	NA	NA	NA	NA	NA	NA	NA	NA	22045582	22024730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22024787_22026026_22026105_22026992_22027107_22028447_22028596_22036444_22036528_22039214_22039368_22042219_22042385_22042878_22043046_22045563
ENSMUSG00000029015.10_22026090_22051259_1	chr5	-	995	9	ISM	ENSMUSG00000029015.10	ENST00000432958.6	2355	17	1108	10120	1108	-10120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCGTTGATGATTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	22051259	22026089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22026105_22026992_22027107_22028447_22028596_22036444_22036528_22039214_22039368_22042219_22042385_22042878_22043046_22045563_22045675_22051220
ENSMUSG00000029015.10_22026993_22051360_1	chr5	-	1081	8	ISM	ENSMUSG00000029015.10	ENST00000432958.6	2355	17	1007	11023	1007	-11023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCGTACACAACAGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	22051360	22026992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22027107_22028447_22028596_22036444_22036528_22039214_22039368_22042219_22042385_22042878_22043046_22045563_22045675_22051220
ENSMUSG00000029015.10_22028485_22052330_1	chr5	-	1085	8	ISM	ENSMUSG00000029015.10	ENST00000432958.6	2355	17	37	12515	37	-12515	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAATAAGCATGGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	22052330	22028484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_22028596_22036444_22036528_22039214_22039368_22042219_22042385_22042878_22043046_22045563_22045675_22051220_22051361_22052175
ENSMUSG00000029016.14_148093151_148098742_1	chr4	-	1144	8	ISM	ENSMUSG00000029016.14	ENST00000312413.10	2621	21	24650	0	24528	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGTAGGAGAGGTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	148098742	148093150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588
ENSMUSG00000029016.14_148093375_148099052_1	chr4	-	1107	8	ISM	ENSMUSG00000029016.14	ENST00000312413.10	2621	21	24340	224	24218	-224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCCCGAATGATTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	148099052	148093374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957
ENSMUSG00000029016.14_148095111_148101435_1	chr4	-	1177	8	ISM	ENSMUSG00000029016.14	ENST00000312413.10	2621	21	21957	1960	21835	-1960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCCTGGGCTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	148101435	148095110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308
ENSMUSG00000029016.14_148095239_148101991_1	chr4	-	1088	9	ISM	ENSMUSG00000029016.14	ENST00000312413.10	2621	21	21401	2088	21279	-2088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTCCCCGAGTGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	148101991	148095238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952
ENSMUSG00000029016.14_148095429_148102119_1	chr4	-	1187	8	ISM	ENSMUSG00000029016.14	ENST00000312413.10	2621	21	21273	2278	21151	-2278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGCCTCACACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	148102119	148095428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952
ENSMUSG00000029016.14_148095571_148102413_1	chr4	-	1099	9	ISM	ENSMUSG00000029016.14	ENST00000312413.10	2621	21	20979	2420	20857	-2420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGCTGGTGAGCAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	148102413	148095570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359
ENSMUSG00000029016.14_148097141_148103326_1	chr4	-	1105	9	ISM	ENSMUSG00000029016.14	ENST00000312413.10	2621	21	20066	3990	19944	-3990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCGGGGCAACGAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	148103326	148097140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297
ENSMUSG00000029016.14_148098132_148104233_1	chr4	-	1149	9	ISM	ENSMUSG00000029016.14	ENST00000312413.10	2621	21	19159	4981	19037	-4981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGACGCTGGCCGCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	148104233	148098131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174
ENSMUSG00000029016.14_148098332_148107858_1	chr4	-	1136	10	ISM	ENSMUSG00000029016.14	ENST00000312413.10	2621	21	15534	5181	15412	-5181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATGGTGAGTGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	148107858	148098331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823
ENSMUSG00000029016.14_148098460_148107950_1	chr4	-	1100	10	ISM	ENSMUSG00000029016.14	ENST00000312413.10	2621	21	15442	5309	15320	-5309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGACCTTTGCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	148107950	148098459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823
ENSMUSG00000029016.14_148098589_148108672_1	chr4	-	1183	10	ISM	ENSMUSG00000029016.14	ENST00000312413.10	2621	21	14720	5438	14598	-5438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGCGGATTTAATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	148108672	148098588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565
ENSMUSG00000029016.14_148098957_148113072_1	chr4	-	1163	11	ISM	ENSMUSG00000029016.14	ENST00000312413.10	2621	21	10320	5806	10198	-5806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTCCGTGCTGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	148113072	148098956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006
ENSMUSG00000029016.14_148101307_148123220_1	chr4	-	1180	12	ISM	ENSMUSG00000029016.14	ENST00000312413.10	2621	21	172	8156	50	-8156	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTCACAAACTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	148123220	148101306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148122370_148122431_148123137
ENSMUSG00000029017.14_21942139_21951026_1	chr5	+	824	7	ISM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	0	11124	0	-11124	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTGCTCACACAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	21942138	21951026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21942275_21943866_21944008_21945037_21945125_21945482_21945613_21947755_21947955_21948376_21948457_21950975
ENSMUSG00000029017.14_21943879_21952017_1	chr5	+	780	7	ISM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	1740	10133	1740	-10133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGTTGAAGCAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	21943878	21952017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21944008_21945037_21945125_21945482_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975
ENSMUSG00000029017.14_21943986_21952119_1	chr5	+	775	7	ISM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	1847	10031	1847	-10031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGGTTTTTGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	21943985	21952119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21944008_21945037_21945125_21945482_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975
ENSMUSG00000029017.14_21945103_21953771_1	chr5	+	713	7	ISM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	2964	8379	2964	-8379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGCCATGGCAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	21945102	21953771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21945125_21945482_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746
ENSMUSG00000029017.14_21945510_21953837_1	chr5	+	730	6	ISM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	3371	8313	3371	-8313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGGACTCTATATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	21945509	21953837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746
ENSMUSG00000029017.14_21947738_21961485_1	chr5	+	801	6	ISM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	5599	665	5599	-665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGTTAAGGAAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	21947737	21961485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399
ENSMUSG00000029017.14_21947881_21961629_1	chr5	+	703	7	ISM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	5742	521	5742	-521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATAGGAGAATTCCTATC	NA	NA	NA	NA	NA	NA	NA	NA	21947880	21961629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584
ENSMUSG00000029017.14_21947931_21961848_1	chr5	+	733	8	ISM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	5792	302	5792	-302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTACATTCATGACAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	21947930	21961848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812
ENSMUSG00000029017.14_21948377_21961888_1	chr5	+	749	7	ISM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	6238	262	6238	-262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCCTGCCTCTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	21948376	21961888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812
ENSMUSG00000029017.14_21948401_21962001_1	chr5	+	749	8	ISM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	6262	149	6262	-149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCAGATTTGTAGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	21948400	21962001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
ENSMUSG00000029017.14_21951020_21962144_1	chr5	+	792	7	ISM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	8881	6	8881	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGCGTTAGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	21951019	21962144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
ENSMUSG00000029020.14_147959829_147964559_1	chr4	-	580	4	ISM	ENSMUSG00000029020.14	ENST00000235329.10	2469	19	24589	0	24585	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCACGAAGAAGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	147964559	147959828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398
ENSMUSG00000029020.14_147959829_147989148_1	chr4	-	2525	19	FSM	ENSMUSG00000029020.14	ENST00000675113.1	2525	19	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCACGAAGAAGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	147989148	147959828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983156_147987811_147987952_147989114
ENSMUSG00000029020.14_147959829_147989148_2	chr4	-	2524	19	NNC	ENSMUSG00000029020.14	novel	2525	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCACGAAGAAGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	147989148	147959828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983156_147987812_147987952_147989114
ENSMUSG00000029020.14_147959829_147989148_3	chr4	-	2517	19	NNC	ENSMUSG00000029020.14	novel	2525	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCACGAAGAAGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	147989148	147959828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966481_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983156_147987811_147987952_147989114
ENSMUSG00000029020.14_147959829_147989148_4	chr4	-	2522	19	NNC	ENSMUSG00000029020.14	novel	2525	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCACGAAGAAGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	147989148	147959828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983156_147987811_147987955_147989120
ENSMUSG00000029020.14_147966618_147970844_1	chr4	-	719	7	ISM	ENSMUSG00000029020.14	ENSMUST00000105714.8	2427	15	18311	667	18300	-667	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATGACCTGAATTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	147970844	147966617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727
ENSMUSG00000029020.14_147973077_147987954_1	chr4	-	746	5	ISM	ENSMUSG00000029020.14	ENSMUST00000105714.8	2427	15	1201	7126	1190	-7126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGGGAGACATGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	147987954	147973076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811
ENSMUSG00000029020.14_147973077_147989148_1	chr4	-	637	5	ISM	ENSMUSG00000029020.14	ENST00000444836.5	2372	18	43	13248	0	-7126	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGGGAGACATGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	147989148	147973076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147989114
ENSMUSG00000029022.19_147945235_147950876_1	chr4	-	1462	9	ISM	ENSMUSG00000029022.19	ENSMUST00000030886.15	1813	10	2300	0	2064	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGCCTCTCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	147950876	147945234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691
ENSMUSG00000029022.19_147945497_147952959_1	chr4	-	1334	10	FSM	ENSMUSG00000029022.19	ENSMUST00000030886.15	1813	10	217	262	-19	-249	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCAGCTCTGTCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	147952959	147945496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ENSMUSG00000029022.19_147945497_147953123_1	chr4	-	1498	10	FSM	ENSMUSG00000029022.19	ENSMUST00000030886.15	1813	10	53	262	53	-249	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCAGCTCTGTCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	147953123	147945496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ENSMUSG00000029026.18_154143684_154152122_1	chr4	-	1008	9	ISM	ENSMUSG00000029026.18	ENST00000378280.5	1861	11	29502	238	29502	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGCAGCAACGCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	154152122	154143683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_154143784_154145044_154145139_154145818_154145958_154146968_154147097_154148341_154148431_154148769_154148913_154149094_154149205_154151466_154151583_154152033
ENSMUSG00000029026.18_154143742_154152180_1	chr4	-	1008	9	ISM	ENSMUSG00000029026.18	ENST00000378280.5	1861	11	29444	296	29444	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGAGGGGCCTACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	154152180	154143741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_154143784_154145044_154145139_154145818_154145958_154146968_154147097_154148341_154148431_154148769_154148913_154149094_154149205_154151466_154151583_154152033
ENSMUSG00000029026.18_154145861_154165914_1	chr4	-	999	8	ISM	ENSMUSG00000029026.18	ENST00000378280.5	1861	11	15710	2415	15710	-2415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCGCCACCCCCCTATC	NA	NA	NA	NA	NA	NA	NA	NA	154165914	154145860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_154145958_154146968_154147097_154148341_154148431_154148769_154148913_154149094_154149205_154151466_154151583_154152033_154152221_154165785
ENSMUSG00000029029.15_154229810_154236123_1	chr4	+	272	4	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	2981	5150	2981	-5150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGAGGCGGGACTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	154229809	154236123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_154229853_154230947_154231065_154233166_154233240_154236084
ENSMUSG00000029029.15_154230972_154236829_1	chr4	+	305	4	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	4143	4444	4143	-4444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGGGCCCCGAATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	154230971	154236829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_154231065_154233166_154233240_154236084_154236189_154236794
ENSMUSG00000029029.15_154233191_154237053_1	chr4	+	276	4	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	6362	4220	6362	-4220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCAGCATACTGTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	154233190	154237053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_154233240_154236084_154236189_154236794_154236882_154237017
ENSMUSG00000029029.15_154236850_154239019_1	chr4	+	273	4	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	10021	2254	10021	-2254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTGGGGTTGGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	154236849	154239019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_154236882_154237017_154237153_154237249_154237328_154238991
ENSMUSG00000029029.15_154237093_154239753_1	chr4	+	300	4	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	10264	1520	10264	-1520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAACCCGAGGATGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	154237092	154239753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_154237153_154237249_154237328_154238991_154239098_154239697
ENSMUSG00000029029.15_154239037_154240640_1	chr4	+	270	3	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	12208	633	12208	-633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCAGTGGGACCCACA	NA	NA	NA	NA	NA	NA	NA	NA	154239036	154240640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_154239098_154239697_154239824_154240557
ENSMUSG00000029029.15_154240600_154241118_1	chr4	+	280	2	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	13771	155	13771	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCATGCCTAGGACCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	154240599	154241118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_154240750_154240988
ENSMUSG00000029030.15_154242461_154244718_1	chr4	-	893	3	ISM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	405	519	371	352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAAATACAGTAGCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	154244718	154242460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_154243023_154243725_154243880_154244541
ENSMUSG00000029030.15_154242813_154245063_1	chr4	-	793	4	FSM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	60	871	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAAGGTGGTGGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	154245063	154242812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_154243023_154243725_154243880_154244541_154244719_154244811
ENSMUSG00000029034.10_155969597_155972185_1	chr4	+	949	8	ISM	ENSMUSG00000029034.10	ENST00000421495.6	1488	12	43	811	43	-811	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAGTTCCTGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	155969596	155972185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155969654_155969743_155969779_155970021_155970161_155970548_155970641_155971116_155971445_155971572_155971657_155971888_155971979_155972061
ENSMUSG00000029034.10_155969743_155972420_1	chr4	+	1041	8	ISM	ENSMUSG00000029034.10	ENST00000421495.6	1488	12	189	576	189	-576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1632	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGGGCAGACTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	155969742	155972420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155969779_155970021_155970161_155970548_155970641_155971116_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311
ENSMUSG00000029034.10_155970021_155972420_1	chr4	+	1004	7	NNC	ENSMUSG00000029034.10	novel	1488	12	NA	NA	467	-576	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1104	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGGGCAGACTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	155970020	155972420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_155970161_155970548_155970641_155971118_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311
ENSMUSG00000029034.10_155970021_155972420_2	chr4	+	1006	7	ISM	ENSMUSG00000029034.10	ENST00000421495.6	1488	12	467	576	467	-576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGGGCAGACTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	155970020	155972420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155970161_155970548_155970641_155971116_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311
ENSMUSG00000029034.10_155970021_155972566_1	chr4	+	1067	8	ISM	ENSMUSG00000029034.10	ENST00000421495.6	1488	12	467	430	467	-430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1929	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGTACAAACAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	155970020	155972566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155970161_155970548_155970641_155971116_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504
ENSMUSG00000029034.10_155970597_155972704_1	chr4	+	943	8	ISM	ENSMUSG00000029034.10	ENST00000421495.6	1488	12	1043	292	1043	-292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCACCTGTCGTGTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	155970596	155972704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155970641_155971116_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640
ENSMUSG00000029034.10_155971227_155972948_1	chr4	+	964	8	ISM	ENSMUSG00000029034.10	ENST00000421495.6	1488	12	1673	48	1673	-48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1050	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGGTGCTATTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	155971226	155972948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852
ENSMUSG00000029034.10_155971273_155972982_1	chr4	+	952	8	ISM	ENSMUSG00000029034.10	ENST00000421495.6	1488	12	1719	14	1719	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAGCATGGGCATCAC	NA	NA	NA	NA	NA	NA	NA	NA	155971272	155972982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852
ENSMUSG00000029034.10_155971289_155972987_1	chr4	+	941	8	ISM	ENSMUSG00000029034.10	ENST00000421495.6	1488	12	1735	9	1735	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	916	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCATGGGCATCACTATTA	NA	NA	NA	NA	NA	NA	NA	NA	155971288	155972987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852
ENSMUSG00000029034.10_155971381_155972996_1	chr4	+	858	8	ISM	ENSMUSG00000029034.10	ENST00000421495.6	1488	12	1827	0	1827	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACTATTACTCCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	155971380	155972996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852
ENSMUSG00000029036.19_155825098_155831938_1	chr4	-	989	3	ISM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	13612	0	13612	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGATGGCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	155831938	155825097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155825810_155830485_155830595_155831770
ENSMUSG00000029036.19_155825291_155834631_1	chr4	-	962	6	ISM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	10919	193	10919	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTCCTGGACATTACT	NA	NA	NA	NA	NA	NA	NA	NA	155834631	155825290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588
ENSMUSG00000029036.19_155825479_155834949_1	chr4	-	876	7	ISM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	10601	381	10601	-381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCGTCTCTGACTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	155834949	155825478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929
ENSMUSG00000029036.19_155825676_155835958_1	chr4	-	907	9	ISM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	9592	578	9592	-578	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCCACATCCTTCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	155835958	155825675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893
ENSMUSG00000029036.19_155825741_155835995_1	chr4	-	879	9	ISM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	9555	643	9555	-643	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCAGCAGCACCAGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	155835995	155825740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893
ENSMUSG00000029036.19_155830524_155838355_1	chr4	-	913	10	ISM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	7195	5426	7195	-5426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCGGGAGATTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	155838355	155830523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338
ENSMUSG00000029036.19_155831770_155838504_1	chr4	-	992	9	ISM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	7046	6672	7046	-6672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTATCCAGCCCCGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	155838504	155831769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338
ENSMUSG00000029036.19_155831880_155839264_1	chr4	-	933	10	ISM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	6286	6782	6286	-6782	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGACGAGATGGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	155839264	155831879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213
ENSMUSG00000029036.19_155833126_155840195_1	chr4	-	955	10	ISM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	5355	8028	5355	-8028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCAGTCCGGCCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	155840195	155833125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135
ENSMUSG00000029036.19_155834589_155840625_1	chr4	-	938	9	ISM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	4925	9491	4925	-9491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCATATAACCCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	155840625	155834588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517
ENSMUSG00000029036.19_155834693_155841625_1	chr4	-	905	10	ISM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	3925	9595	3925	-9595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGACTACGCCATCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	155841625	155834692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548
ENSMUSG00000029036.19_155834995_155845385_1	chr4	-	946	10	ISM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	165	9897	165	-9897	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTGTATAGGAACGTT	NA	NA	NA	NA	NA	NA	NA	NA	155845385	155834994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ENSMUSG00000029036.19_155835975_155845525_1	chr4	-	887	8	ISM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	25	10877	25	-10877	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCCGATTGGGAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	155845525	155835974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ENSMUSG00000029038.10_155789257_155800066_1	chr4	+	810	2	ISM	ENSMUSG00000029038.10	ENSMUST00000105595.2	874	4	-335	16580	0	-16580	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGGCTGACCCTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	155789256	155800066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155789919_155799918
ENSMUSG00000029038.10_155789441_155815921_1	chr4	+	762	3	ISM	ENSMUSG00000029038.10	ENSMUST00000105595.2	874	4	-151	725	-151	-725	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGCACAGAGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	155789440	155815921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155789919_155799918_155800063_155815781
ENSMUSG00000029038.10_155789592_155817998_1	chr4	+	799	5	FSM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	335	338	0	-338	multi-exon	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCCTTTCTGCATACTGT	NA	NA	NA	NA	NA	NA	NA	NA	155789591	155817998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
ENSMUSG00000029038.10_155789743_155818064_1	chr4	+	714	5	FSM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	486	272	151	-272	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACCTTTGTTGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	155789742	155818064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
ENSMUSG00000029038.10_155789824_155818130_1	chr4	+	699	5	FSM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	567	206	232	-206	multi-exon	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTACATCATCAATGTACT	NA	NA	NA	NA	NA	NA	NA	NA	155789823	155818130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
ENSMUSG00000029038.10_155799916_155818336_1	chr4	+	813	4	ISM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	10659	0	10324	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGAATTGCCACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	155799915	155818336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155800063_155815781_155815922_155816383_155816503_155817929
ENSMUSG00000029038.10_155815782_155816646_1	chr4	+	403	2	ISM	ENSMUSG00000029038.10	ENSMUST00000105595.2	874	4	26190	0	26190	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACCAAATGCTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	155815781	155816646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155815922_155816383
ENSMUSG00000029047.14_155151516_155156890_1	chr4	+	1645	6	FSM	ENSMUSG00000029047.14	ENSMUST00000103180.4	1688	6	43	0	43	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGCCGGGCGTGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	155151515	155156890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155151632_155152279_155152361_155153119_155153527_155154843_155155020_155155097_155155234_155156161
ENSMUSG00000029048.4_155158683_155170828_1	chr4	-	1478	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	2	116	-1	79	multi-exon	FALSE	canonical	NA	NA	NA	NA	5510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGACCTACCACGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	155170828	155158682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ENSMUSG00000029048.4_155159069_155167158_1	chr4	-	772	5	ISM	ENSMUSG00000029048.4	ENST00000378513.7	1298	6	3669	307	3669	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTGTGCCAGAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	155167158	155159068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155159486_155160045_155160182_155161168_155161248_155165255_155165361_155167123
ENSMUSG00000029048.4_155159208_155170828_1	chr4	-	853	6	FSM	ENSMUSG00000029048.4	ENST00000378513.7	1298	6	-1	446	-1	-446	multi-exon	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGTGATGTTCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	155170828	155159207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155165255_155165361_155167123_155167212_155170661
ENSMUSG00000029048.4_155159270_155170828_1	chr4	-	791	6	FSM	ENSMUSG00000029048.4	ENST00000378513.7	1298	6	-1	508	-1	-508	multi-exon	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATCTGAAATATCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	155170828	155159269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155165255_155165361_155167123_155167212_155170661
ENSMUSG00000029048.4_155159330_155170828_1	chr4	-	731	6	FSM	ENSMUSG00000029048.4	ENST00000378513.7	1298	6	-1	568	-1	-568	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATAAAGTAGTTGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	155170828	155159329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155165255_155165361_155167123_155167212_155170661
ENSMUSG00000029054.9_155469858_155473480_1	chr4	-	1190	8	FSM	ENSMUSG00000029054.9	ENST00000640949.1	1217	8	27	0	27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCAGTGTGTGCACCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	155473480	155469857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_155470149_155470391_155470535_155470859_155471016_155471610_155471749_155472314_155472398_155472711_155472933_155473022_155473091_155473390
ENSMUSG00000029054.9_155469858_155473480_2	chr4	-	1335	8	NNC	ENSMUSG00000029054.9	novel	1370	8	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCAGTGTGTGCACCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	155473480	155469857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_155470149_155470391_155470604_155470859_155471008_155471610_155471833_155472314_155472398_155472711_155472933_155473022_155473091_155473390
ENSMUSG00000029054.9_155469858_155473480_3	chr4	-	1343	8	FSM	ENSMUSG00000029054.9	ENST00000640067.1	1370	8	27	0	27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCAGTGTGTGCACCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	155473480	155469857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_155470149_155470391_155470604_155470859_155471016_155471610_155471833_155472314_155472398_155472711_155472933_155473022_155473091_155473390
ENSMUSG00000029056.14_155054112_155055881_1	chr4	+	616	5	ISM	ENSMUSG00000029056.14	ENSMUST00000030931.11	2508	19	5532	9447	5522	-9447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGGGCAGCTCGCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	155054111	155055881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829
ENSMUSG00000029056.14_155054173_155055953_1	chr4	+	627	5	ISM	ENSMUSG00000029056.14	ENSMUST00000030931.11	2508	19	5593	9375	5583	-9375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGGTCACCCCGTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	155054172	155055953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829
ENSMUSG00000029056.14_155054928_155059168_1	chr4	+	670	6	ISM	ENSMUSG00000029056.14	ENSMUST00000030931.11	2508	19	6348	6160	6338	-6160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGTAGACCTCACTGAT	NA	NA	NA	NA	NA	NA	NA	NA	155054927	155059168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086
ENSMUSG00000029056.14_155056632_155061747_1	chr4	+	602	6	ISM	ENSMUSG00000029056.14	ENSMUST00000030931.11	2508	19	8052	3581	8042	-3581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTGGTGAAGGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	155056631	155061747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659
ENSMUSG00000029056.14_155060728_155064014_1	chr4	+	621	7	ISM	ENSMUSG00000029056.14	ENSMUST00000030931.11	2508	19	12148	1314	12138	-1314	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAACGCATTGCAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	155060727	155064014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948
ENSMUSG00000029059.10_154979578_154983036_2	chr4	-	763	6	FSM	ENSMUSG00000029059.10	ENST00000378427.6	865	6	103	-1	103	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCAAGGAGGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	154983036	154979577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_154979958_154981496_154981584_154981805_154981882_154981962_154982027_154982584_154982637_154982932
ENSMUSG00000029059.10_154979578_154983106_1	chr4	-	892	6	FSM	ENSMUSG00000029059.10	ENST00000378424.9	924	6	33	-1	33	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCAAGGAGGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	154983106	154979577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_154979958_154981496_154981584_154981805_154981882_154981962_154982086_154982584_154982637_154982932
ENSMUSG00000029059.10_154979720_154981990_1	chr4	-	461	4	ISM	ENSMUSG00000029059.10	ENST00000444521.6	956	6	1149	141	1149	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCGGGGCGTGGGCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	154981990	154979719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_154979958_154981496_154981616_154981805_154981882_154981962
ENSMUSG00000029060.18_155739139_155741526_1	chr4	-	1424	8	ISM	ENSMUSG00000029060.18	ENST00000504599.6	2877	18	4284	-71	4284	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	155741526	155739138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369
ENSMUSG00000029060.18_155739391_155741771_1	chr4	-	1321	9	ISM	ENSMUSG00000029060.18	ENST00000504599.6	2877	18	4039	181	4039	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	995	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGAGCCGCTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	155741771	155739390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622
ENSMUSG00000029060.18_155739562_155741979_1	chr4	-	1395	9	ISM	ENSMUSG00000029060.18	ENST00000504599.6	2877	18	3831	352	3831	-352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1089	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTAGGGTGGGGCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	155741979	155739561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845
ENSMUSG00000029060.18_155739709_155742148_1	chr4	-	1423	9	ISM	ENSMUSG00000029060.18	ENST00000504599.6	2877	18	3662	499	3662	-499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1020	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTCGGGGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	155742148	155739708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054
ENSMUSG00000029060.18_155739973_155742436_1	chr4	-	1435	9	ISM	ENSMUSG00000029060.18	ENST00000378712.5	2494	16	3374	763	3374	-763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	918	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGATGGAGGGCTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	155742436	155739972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311
ENSMUSG00000029060.18_155740106_155743389_1	chr4	-	1321	10	ISM	ENSMUSG00000029060.18	ENST00000378712.5	2494	16	2421	896	2421	-896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGCTTCCTGGCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	155743389	155740105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350
ENSMUSG00000029060.18_155740597_155743628_1	chr4	-	1307	10	ISM	ENSMUSG00000029060.18	ENST00000520777.6	2865	18	2182	1387	2182	-1387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGCTGTTGCCCCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	155743628	155740596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579
ENSMUSG00000029060.18_155740638_155743716_1	chr4	-	1366	10	ISM	ENSMUSG00000029060.18	ENST00000378712.5	2494	16	2094	1428	2094	-1428	internal_fragment	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGAGGGTGACACGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	155743716	155740637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579
ENSMUSG00000029060.18_155740702_155743910_1	chr4	-	1362	11	ISM	ENSMUSG00000029060.18	ENST00000520777.6	2865	18	1900	1492	1900	-1492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGCCCACCTGGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	155743910	155740701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844
ENSMUSG00000029060.18_155740885_155744040_1	chr4	-	1397	10	ISM	ENSMUSG00000029060.18	ENST00000520777.6	2865	18	1770	1675	1770	-1675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCGGGAGGTGGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	155744040	155740884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844
ENSMUSG00000029060.18_155741103_155744241_1	chr4	-	1410	10	ISM	ENSMUSG00000029060.18	ENST00000520777.6	2865	18	1569	1893	1569	-1893	internal_fragment	FALSE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGGGGGTTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	155744241	155741102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134
ENSMUSG00000029060.18_155741103_155745479_1	chr4	-	1400	10	ISM	ENSMUSG00000029060.18	ENST00000378712.5	2494	16	331	1893	331	-1893	internal_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGGGGGTTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	155745479	155741102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155744134_155744242_155745306
ENSMUSG00000029060.18_155741232_155745339_1	chr4	-	1314	11	ISM	ENSMUSG00000029060.18	ENST00000520777.6	2865	18	471	2022	471	-2022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTGCTGGTGCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	155745339	155741231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306
ENSMUSG00000029060.18_155741400_155745479_1	chr4	-	1392	10	ISM	ENSMUSG00000029060.18	ENST00000520777.6	2865	18	331	2190	331	-2190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAACGTGGTTGTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	155745479	155741399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306
ENSMUSG00000029060.18_155741400_155745662_1	chr4	-	1308	10	ISM	ENSMUSG00000029060.18	ENST00000378712.5	2494	16	148	2190	148	-2190	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAACGTGGTTGTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	155745662	155741399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155744134_155744242_155745306_155745479_155745562
ENSMUSG00000029060.18_155741622_155745662_1	chr4	-	1365	10	ISM	ENSMUSG00000029060.18	ENST00000520777.6	2865	18	148	2412	148	-2412	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCCTGGGCAGGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	155745662	155741621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562
ENSMUSG00000029060.18_155741692_155743911_1	chr4	-	800	7	ISM	ENSMUSG00000029060.18	ENST00000504599.6	2877	18	1899	2482	1899	-2482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGCAAGAGCAAGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	155743911	155741691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844
ENSMUSG00000029060.18_155741861_155745768_1	chr4	-	1306	9	ISM	ENSMUSG00000029060.18	ENST00000520777.6	2865	18	42	2651	42	-2651	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCATCCAGAGCAGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	155745768	155741860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562
ENSMUSG00000029060.18_155741933_155744174_1	chr4	-	801	7	ISM	ENSMUSG00000029060.18	ENST00000504599.6	2877	18	1636	2723	1636	-2723	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGCACCCGGGGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	155744174	155741932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134
ENSMUSG00000029060.18_155742081_155745382_1	chr4	-	871	7	ISM	ENSMUSG00000029060.18	ENST00000504599.6	2877	18	428	2871	428	-2871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGCGTGCCAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	155745382	155742080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306
ENSMUSG00000029060.18_155742186_155745431_1	chr4	-	815	7	ISM	ENSMUSG00000029060.18	ENST00000504599.6	2877	18	379	2976	379	-2976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGGAGATGGAAACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	155745431	155742185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306
ENSMUSG00000029060.18_155742384_155745613_1	chr4	-	809	7	ISM	ENSMUSG00000029060.18	ENST00000504599.6	2877	18	197	3174	197	-3174	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCGGTGACCTTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	155745613	155742383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562
ENSMUSG00000029061.3_155735112_155737561_1	chr4	-	1154	8	FSM	ENSMUSG00000029061.3	ENSMUST00000030937.2	1434	8	280	0	280	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTTGTTTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	155737561	155735111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_155735341_155735463_155735591_155735695_155735807_155735887_155736053_155736441_155736610_155736678_155736819_155736905_155737043_155737484
ENSMUSG00000029061.3_155735253_155737664_1	chr4	-	1116	8	FSM	ENSMUSG00000029061.3	ENSMUST00000030937.2	1434	8	177	141	177	-141	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAACGAAGGCACCTACAC	NA	NA	NA	NA	NA	NA	NA	NA	155737664	155735252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_155735341_155735463_155735591_155735695_155735807_155735887_155736053_155736441_155736610_155736678_155736819_155736905_155737043_155737484
ENSMUSG00000029061.3_155735464_155737841_1	chr4	-	1205	7	ISM	ENSMUSG00000029061.3	ENSMUST00000030937.2	1434	8	0	352	0	-352	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGCCAGCACTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	155737841	155735463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155735591_155735695_155735807_155735887_155736053_155736441_155736610_155736678_155736819_155736905_155737043_155737484
ENSMUSG00000029062.15_155709988_155733932_1	chr4	+	2139	18	ISM	ENSMUSG00000029062.15	ENST00000357760.6	2373	19	1	313	1	-313	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATATTTCCGAGAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	155709987	155733932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155710112_155711230_155711347_155713152_155713251_155714650_155714790_155718515_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878
ENSMUSG00000029062.15_155710026_155733997_1	chr4	+	2166	18	ISM	ENSMUSG00000029062.15	ENST00000357760.6	2373	19	39	248	39	-248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCAGCAGAGAGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	155710025	155733997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155710112_155711230_155711347_155713152_155713251_155714650_155714790_155718515_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878
ENSMUSG00000029062.15_155710035_155732803_1	chr4	+	1576	14	ISM	ENSMUSG00000029062.15	ENST00000358779.9	2343	19	48	1442	48	-1442	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACACCGTGACCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	155710034	155732803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155710112_155711230_155711347_155713152_155713251_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739
ENSMUSG00000029062.15_155710041_155733998_1	chr4	+	2152	18	ISM	ENSMUSG00000029062.15	ENST00000357760.6	2373	19	54	247	54	-247	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCAGCAGAGAGTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	155710040	155733998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155710112_155711230_155711347_155713152_155713251_155714650_155714790_155718515_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878
ENSMUSG00000029062.15_155710083_155734051_1	chr4	+	2163	18	ISM	ENSMUSG00000029062.15	ENST00000357760.6	2373	19	96	194	96	-194	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTACAGCCAGCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	155710082	155734051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155710112_155711230_155711347_155713152_155713251_155714650_155714790_155718515_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878
ENSMUSG00000029062.15_155711231_155734245_1	chr4	+	2248	18	ISM	ENSMUSG00000029062.15	ENST00000357760.6	2373	19	1244	0	1244	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1000	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGATGGACGTGGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	155711230	155734245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155711347_155713152_155713251_155714650_155714790_155718515_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ENSMUSG00000029062.15_155711314_155733000_1	chr4	+	1532	14	ISM	ENSMUSG00000029062.15	ENST00000358779.9	2343	19	1327	1245	1327	-1245	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTAACCCTGTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	155711313	155733000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155711347_155713152_155713251_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942
ENSMUSG00000029062.15_155713218_155733208_1	chr4	+	1519	14	ISM	ENSMUSG00000029062.15	ENST00000358779.9	2343	19	3231	1037	3231	-1037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATATTTGGAGAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	155713217	155733208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155713251_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173
ENSMUSG00000029062.15_155724049_155734395_1	chr4	+	1757	13	ISM	ENSMUSG00000029062.15	ENST00000340677.9	2420	20	14062	-150	14062	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAACTTGCCTCGTAA	NA	NA	NA	NA	NA	NA	NA	NA	155724048	155734395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ENSMUSG00000029063.17_155648283_155661547_1	chr4	+	252	2	ISM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	126	13911	126	-13907	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTCATGGGGATGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	155648282	155661547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155648437_155661449
ENSMUSG00000029063.17_155661510_155668635_1	chr4	+	271	3	ISM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	13353	6823	-5442	-6819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCCAAGAGTGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	155661509	155668635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155661655_155663767_155663852_155668593
ENSMUSG00000029063.17_155661568_155668679_1	chr4	+	257	3	ISM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	13411	6779	-5384	-6775	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTACTGCAGCCCTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	155661567	155668679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155661655_155663767_155663852_155668593
ENSMUSG00000029063.17_155661636_155669656_1	chr4	+	281	4	ISM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	13479	5802	-5316	-5798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATAGTGAGTGATGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	155661635	155669656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155661655_155663767_155663852_155668593_155668724_155669608
ENSMUSG00000029063.17_155668594_155673837_1	chr4	+	962	9	ISM	ENSMUSG00000029063.17	ENSMUST00000105612.2	2737	10	1642	1621	1642	-1617	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAGTGACTGGTTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	155668593	155673837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ENSMUSG00000029063.17_155669649_155673975_1	chr4	+	930	8	ISM	ENSMUSG00000029063.17	ENSMUST00000105612.2	2737	10	2697	1483	2697	-1479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGCCTTCCTTCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	155669648	155673975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ENSMUSG00000029064.16_155575827_155642110_1	chr4	+	1518	12	FSM	ENSMUSG00000029064.16	ENSMUST00000165335.8	3143	12	9	1616	0	-1614	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTCTGTGCTGTAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	155575826	155642110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ENSMUSG00000029064.16_155575827_155642324_1	chr4	+	1732	12	FSM	ENSMUSG00000029064.16	ENSMUST00000165335.8	3143	12	9	1402	0	-1400	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAATCAGTGATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	155575826	155642324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ENSMUSG00000029064.16_155575827_155642391_1	chr4	+	1799	12	FSM	ENSMUSG00000029064.16	ENSMUST00000165335.8	3143	12	9	1335	0	-1333	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTCTAAATATAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	155575826	155642391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ENSMUSG00000029064.16_155575827_155643069_1	chr4	+	2328	10	FSM	ENSMUSG00000029064.16	ENST00000615252.4	3018	10	32	658	0	-655	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATTTTAAGAAATAACC	NA	NA	NA	NA	NA	NA	NA	NA	155575826	155643069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ENSMUSG00000029064.16_155575940_155643130_1	chr4	+	2276	10	FSM	ENSMUSG00000029064.16	ENST00000615252.4	3018	10	145	597	113	-594	multi-exon	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCTGCACACATATCGG	NA	NA	NA	NA	NA	NA	NA	NA	155575939	155643130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ENSMUSG00000029064.16_155575980_155642459_1	chr4	+	1714	12	FSM	ENSMUSG00000029064.16	ENSMUST00000165335.8	3143	12	162	1267	153	-1265	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGTAGTTAAGAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	155575979	155642459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ENSMUSG00000029064.16_155600097_155643235_1	chr4	+	2274	9	ISM	ENSMUSG00000029064.16	ENST00000615252.4	3018	10	24302	492	-11813	-489	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGGATTCTGGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	155600096	155643235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155600137_155611869_155611967_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ENSMUSG00000029064.16_155619838_155642727_1	chr4	+	1716	8	ISM	ENSMUSG00000029064.16	ENSMUST00000176637.2	2832	10	7928	997	7928	-997	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCTGTCCCTCCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	155619837	155642727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ENSMUSG00000029064.16_155625040_155643402_1	chr4	+	2280	7	ISM	ENSMUSG00000029064.16	ENSMUST00000176637.2	2832	10	13130	322	13130	-322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCAGTGTTCTGTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	155625039	155643402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ENSMUSG00000029066.13_155887978_155893288_1	chr4	+	758	4	NNC	ENSMUSG00000029066.13	novel	764	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTATTTCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	155887977	155893288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_155888200_155888289_155888401_155891364_155891443_155892941
ENSMUSG00000029068.17_155897092_155899736_1	chr4	+	397	4	ISM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	146	9264	146	-9264	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCTAAAGAACCAGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	155897091	155899736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699
ENSMUSG00000029068.17_155897235_155902436_1	chr4	+	395	5	ISM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	289	6564	289	-6564	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCATGGTGAGTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	155897234	155902436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379
ENSMUSG00000029068.17_155897954_155905296_1	chr4	+	414	5	ISM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	1008	3704	1008	-3704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAAGAAATTTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	155897953	155905296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155898026_155899699_155899821_155902379_155902445_155904785_155904886_155905240
ENSMUSG00000029068.17_155899763_155905470_1	chr4	+	369	5	ISM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	2817	3530	2817	-3530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACGCCATTGAAGAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	155899762	155905470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155899821_155902379_155902445_155904785_155904886_155905240_155905346_155905429
ENSMUSG00000029068.17_155905465_155907878_1	chr4	+	388	4	ISM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	8519	1122	8519	-1122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTACACCGAGGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	155905464	155907878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155905572_155906268_155906378_155906461_155906555_155907799
ENSMUSG00000029068.17_155905527_155907931_1	chr4	+	379	4	ISM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	8581	1069	8581	-1069	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGGACTGCAAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	155905526	155907931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155905572_155906268_155906378_155906461_155906555_155907799
ENSMUSG00000029068.17_155906540_155908185_1	chr4	+	401	2	ISM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	9594	815	9594	-815	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTTGGGCACACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	155906539	155908185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155906555_155907799
ENSMUSG00000029070.10_155924183_155927577_1	chr4	+	1086	6	FSM	ENSMUSG00000029070.10	ENST00000342753.8	1137	6	51	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGGATCTGGATAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	155924182	155927577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155924352_155925882_155926004_155926118_155926590_155927013_155927200_155927361_155927439_155927515
ENSMUSG00000029070.10_155924183_155928034_1	chr4	+	1692	10	FSM	ENSMUSG00000029070.10	ENSMUST00000030947.4	2203	10	0	511	0	457	multi-exon	TRUE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAACTTAAACACAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	155924182	155928034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155924348_155925234_155925256_155925362_155925666_155925901_155926004_155926118_155926590_155927013_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
ENSMUSG00000029070.10_155925235_155928222_1	chr4	+	1715	9	ISM	ENSMUSG00000029070.10	ENSMUST00000030947.4	2203	10	1052	323	1052	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGCTGTTATAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	155925234	155928222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155925256_155925362_155925666_155925901_155926004_155926118_155926590_155927013_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
ENSMUSG00000029070.10_155925406_155928295_1	chr4	+	1724	8	ISM	ENSMUSG00000029070.10	ENSMUST00000030947.4	2203	10	1223	250	1223	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCTGCTTCTGATTCC	NA	NA	NA	NA	NA	NA	NA	NA	155925405	155928295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155925666_155925901_155926004_155926118_155926590_155927013_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
ENSMUSG00000029070.10_155925413_155928395_1	chr4	+	1817	8	ISM	ENSMUSG00000029070.10	ENSMUST00000030947.4	2203	10	1230	150	1230	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGTCTGGGGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	155925412	155928395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155925666_155925901_155926004_155926118_155926590_155927013_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
ENSMUSG00000029070.10_155925901_155928545_1	chr4	+	1715	7	ISM	ENSMUSG00000029070.10	ENSMUST00000030947.4	2203	10	1718	0	1718	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTCTTGGACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	155925900	155928545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155926004_155926118_155926590_155927013_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
ENSMUSG00000029073.10_155950702_155951798_1	chr4	-	870	2	ISM	ENSMUSG00000029073.10	ENSMUST00000030950.8	2662	3	2099	1522	2099	-1522	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGATAGGAAAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	155951798	155950701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_155951343_155951569
ENSMUSG00000029073.10_155950823_155953819_1	chr4	-	941	3	FSM	ENSMUSG00000029073.10	ENSMUST00000030950.8	2662	3	78	1643	78	-1643	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCTAGGCGTGGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	155953819	155950822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_155951343_155951569_155951795_155953623
ENSMUSG00000029073.10_155950950_155953819_1	chr4	-	814	3	FSM	ENSMUSG00000029073.10	ENSMUST00000030950.8	2662	3	78	1770	78	-1770	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTCGAGGCCATGAATA	NA	NA	NA	NA	NA	NA	NA	NA	155953819	155950949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_155951343_155951569_155951795_155953623
ENSMUSG00000029074.15_156119894_156129328_1	chr4	-	692	6	ISM	ENSMUSG00000029074.15	ENSMUST00000051509.15	2304	15	5946	597	2528	-80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCCAAAAGAGCTTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	156129328	156119893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_156119909_156120202_156120297_156120593_156120711_156127503_156127645_156128082_156128255_156129175
ENSMUSG00000029074.15_156120262_156129809_1	chr4	-	665	6	ISM	ENSMUSG00000029074.15	ENSMUST00000051509.15	2304	15	5465	965	2047	-448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATACCAACTGTGAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	156129809	156120261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_156120297_156120593_156120711_156127503_156127645_156128082_156128255_156129175_156129348_156129781
ENSMUSG00000029074.15_156120640_156129852_1	chr4	-	627	5	ISM	ENSMUSG00000029074.15	ENSMUST00000051509.15	2304	15	5422	1343	2004	-826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGACCTCATTGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	156129852	156120639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_156120711_156127503_156127645_156128082_156128255_156129175_156129348_156129781
ENSMUSG00000029074.15_156127504_156131407_1	chr4	-	690	5	NIC	ENSMUSG00000029074.15	novel	1227	10	NA	NA	449	-7690	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTCGAGCTCTGAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	156131407	156127503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_-_156127645_156128082_156128255_156129175_156129348_156129781_156129933_156131353
ENSMUSG00000029074.15_156127504_156131462_1	chr4	-	745	5	NIC	ENSMUSG00000029074.15	novel	1227	10	NA	NA	394	-7690	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTCGAGCTCTGAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	156131462	156127503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_-_156127645_156128082_156128255_156129175_156129348_156129781_156129933_156131353
ENSMUSG00000029074.15_156127620_156131576_1	chr4	-	667	6	NIC	ENSMUSG00000029074.15	novel	1227	10	NA	NA	280	-7806	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGCTGCTGAAGGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	156131576	156127619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_-_156127645_156128082_156128255_156129175_156129348_156129781_156129933_156131353_156131468_156131543
ENSMUSG00000029074.15_156128083_156131662_1	chr4	-	728	5	NIC	ENSMUSG00000029074.15	novel	1227	10	NA	NA	194	-8269	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACCCCTTATAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	156131662	156128082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_-_156128255_156129175_156129348_156129781_156129933_156131353_156131468_156131543
ENSMUSG00000029074.15_156128205_156131823_1	chr4	-	623	6	NIC	ENSMUSG00000029074.15	novel	1227	10	NA	NA	33	-8391	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACATGCTCATTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	156131823	156128204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_-_156128255_156129175_156129348_156129781_156129933_156131353_156131468_156131543_156131663_156131806
ENSMUSG00000029076.15_156077329_156080836_1	chr4	+	508	3	ISM	ENSMUSG00000029076.15	ENSMUST00000105579.8	1670	8	0	13831	0	-6320	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGGTGAAGCTGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	156077328	156080836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156077464_156077609_156077792_156080645
ENSMUSG00000029076.15_156077368_156080891_1	chr4	+	524	3	ISM	ENSMUSG00000029076.15	ENSMUST00000105579.8	1670	8	39	13776	0	-6265	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGGGAAAGGACATGG	NA	NA	NA	NA	NA	NA	NA	NA	156077367	156080891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156077464_156077609_156077792_156080645
ENSMUSG00000029076.15_156077627_156083885_1	chr4	+	526	3	ISM	ENSMUSG00000029076.15	ENSMUST00000097734.11	973	5	0	3271	0	-3271	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGGAGATGCAGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	156077626	156083885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156077792_156080645_156080976_156083854
ENSMUSG00000029076.15_156077731_156083971_1	chr4	+	508	3	ISM	ENSMUSG00000029076.15	ENSMUST00000097734.11	973	5	104	3185	-103	-3185	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGACCCTGACGGTGACG	NA	NA	NA	NA	NA	NA	NA	NA	156077730	156083971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156077792_156080645_156080976_156083854
ENSMUSG00000029076.15_156080645_156093402_1	chr4	+	741	4	ISM	ENSMUSG00000029076.15	ENST00000360001.12	1472	7	11	1544	11	-1265	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGACCTTTCCGCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	156080644	156093402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156080976_156083854_156083992_156085126_156085241_156093243
ENSMUSG00000029076.15_156080847_156094314_1	chr4	+	799	6	ISM	ENSMUSG00000029076.15	ENST00000360001.12	1472	7	213	632	213	-353	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGGAGCCCGAGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	156080846	156094314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ENSMUSG00000029076.15_156080892_156094317_1	chr4	+	757	6	ISM	ENSMUSG00000029076.15	ENST00000360001.12	1472	7	258	629	258	-350	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCCCGAGGAGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	156080891	156094317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ENSMUSG00000029076.15_156080915_156094314_1	chr4	+	731	6	ISM	ENSMUSG00000029076.15	ENST00000360001.12	1472	7	281	632	281	-353	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGGAGCCCGAGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	156080914	156094314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ENSMUSG00000029076.15_156080956_156094358_1	chr4	+	734	6	ISM	ENSMUSG00000029076.15	ENST00000360001.12	1472	7	322	588	322	-309	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCAGCAAGCTCATGGACT	NA	NA	NA	NA	NA	NA	NA	NA	156080955	156094358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ENSMUSG00000029076.15_156085126_156094667_1	chr4	+	715	5	ISM	ENSMUSG00000029076.15	ENST00000360001.12	1472	7	4492	279	4492	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTCTCCAGCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	156085125	156094667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156085241_156093243_156093403_156093600_156093777_156094230_156094492_156094663
ENSMUSG00000029076.15_156085126_156094775_1	chr4	+	823	5	ISM	ENSMUSG00000029076.15	ENST00000360001.12	1472	7	4492	171	4492	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGCTTGGGATGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	156085125	156094775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156085241_156093243_156093403_156093600_156093777_156094230_156094492_156094663
ENSMUSG00000029076.15_156093244_156094775_1	chr4	+	708	4	ISM	ENSMUSG00000029076.15	ENST00000360001.12	1472	7	12610	171	12610	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGCTTGGGATGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	156093243	156094775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156093403_156093600_156093777_156094230_156094492_156094663
ENSMUSG00000029076.15_156093600_156094946_1	chr4	+	721	3	ISM	ENSMUSG00000029076.15	ENST00000360001.12	1472	7	12966	0	12966	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCCACAGCCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	156093599	156094946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156093777_156094230_156094492_156094663
ENSMUSG00000029093.15_36308784_36555211_1	chr5	-	580	4	FSM	ENSMUSG00000029093.15	ENSMUST00000070720.8	2089	4	272	1237	257	-1237	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCATGCTTGGAGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	36555211	36308783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_36308894_36311166_36311267_36386488_36386557_36554909
ENSMUSG00000029094.13_36092906_36125965_1	chr5	+	951	8	ISM	ENSMUSG00000029094.13	ENST00000420658.6	2441	16	12	29062	12	-29062	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGGGAAGAAAATTACCA	NA	NA	NA	NA	NA	NA	NA	NA	36092905	36125965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_36093025_36093381_36093477_36102531_36102641_36105378_36105591_36108198_36108379_36119089_36119192_36119548_36119631_36125913
ENSMUSG00000029094.13_36092951_36126025_1	chr5	+	966	8	ISM	ENSMUSG00000029094.13	ENST00000420658.6	2441	16	57	29002	57	-29002	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGACATCATCAGCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	36092950	36126025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_36093025_36093381_36093477_36102531_36102641_36105378_36105591_36108198_36108379_36119089_36119192_36119548_36119631_36125913
ENSMUSG00000029094.13_36092981_36131788_1	chr5	+	1031	9	ISM	ENSMUSG00000029094.13	ENST00000420658.6	2441	16	87	23239	87	-23239	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAAACTCATTCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	36092980	36131788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_36093025_36093381_36093477_36102531_36102641_36105378_36105591_36108198_36108379_36119089_36119192_36119548_36119631_36125913_36126064_36131731
ENSMUSG00000029094.13_36093402_36131822_1	chr5	+	1001	8	ISM	ENSMUSG00000029094.13	ENST00000420658.6	2441	16	508	23205	508	-23205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAGACCCACCTCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	36093401	36131822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_36093477_36102531_36102641_36105378_36105591_36108198_36108379_36119089_36119192_36119548_36119631_36125913_36126064_36131731
ENSMUSG00000029094.13_36102531_36131943_1	chr5	+	1048	7	ISM	ENSMUSG00000029094.13	ENST00000420658.6	2441	16	9637	23084	9637	-23084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGGCTTCCCTGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	36102530	36131943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_36102641_36105378_36105591_36108198_36108379_36119089_36119192_36119548_36119631_36125913_36126064_36131731
ENSMUSG00000029094.13_36105519_36141582_1	chr5	+	994	8	ISM	ENSMUSG00000029094.13	ENST00000420658.6	2441	16	12625	13445	12625	-13445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACGGCTACGCCCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	36105518	36141582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_36105591_36108198_36108379_36119089_36119192_36119548_36119631_36125913_36126064_36131731_36131944_36133835_36133982_36141532
ENSMUSG00000029094.13_36108286_36144469_1	chr5	+	974	8	ISM	ENSMUSG00000029094.13	ENST00000420658.6	2441	16	15392	10558	15392	-10558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCTCTACGATAACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	36108285	36144469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_36108379_36119089_36119192_36119548_36119631_36125913_36126064_36131731_36131944_36133835_36133982_36141532_36141651_36144398
ENSMUSG00000029094.13_36119121_36144575_1	chr5	+	956	7	ISM	ENSMUSG00000029094.13	ENST00000420658.6	2441	16	26227	10452	26227	-10452	internal_fragment	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCCCACCTCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	36119120	36144575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_36119192_36119548_36119631_36125913_36126064_36131731_36131944_36133835_36133982_36141532_36141651_36144398
ENSMUSG00000029094.13_36126009_36150933_1	chr5	+	962	7	ISM	ENSMUSG00000029094.13	ENST00000420658.6	2441	16	33115	4094	33115	-4094	internal_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGTTACAGTCCAAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	36126008	36150933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_36126064_36131731_36131944_36133835_36133982_36141532_36141651_36144398_36144666_36146897_36147013_36150884
ENSMUSG00000029094.13_36131731_36151050_1	chr5	+	1025	6	ISM	ENSMUSG00000029094.13	ENST00000420658.6	2441	16	38837	3977	38837	-3977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGGGACTTGGCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	36131730	36151050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_36131944_36133835_36133982_36141532_36141651_36144398_36144666_36146897_36147013_36150884
ENSMUSG00000029094.13_36131865_36153381_1	chr5	+	971	7	ISM	ENSMUSG00000029094.13	ENST00000420658.6	2441	16	38971	1646	38971	-1646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGAGCTGGAGCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	36131864	36153381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_36131944_36133835_36133982_36141532_36141651_36144398_36144666_36146897_36147013_36150884_36151050_36153300
ENSMUSG00000029094.13_36133920_36154899_1	chr5	+	956	7	ISM	ENSMUSG00000029094.13	ENST00000420658.6	2441	16	41026	128	41026	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTCCAGCTGTGATACAA	NA	NA	NA	NA	NA	NA	NA	NA	36133919	36154899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_36133982_36141532_36141651_36144398_36144666_36146897_36147013_36150884_36151050_36153300_36153492_36154861
ENSMUSG00000029094.13_36133965_36154967_1	chr5	+	979	7	ISM	ENSMUSG00000029094.13	ENST00000420658.6	2441	16	41071	60	41071	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCAGCCGTCCTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	36133964	36154967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_36133982_36141532_36141651_36144398_36144666_36146897_36147013_36150884_36151050_36153300_36153492_36154861
ENSMUSG00000029095.18_35955800_36040763_1	chr5	+	1578	15	FSM	ENSMUSG00000029095.18	ENST00000361737.9	2623	15	6	1039	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTGCCAACATCTTACCA	NA	NA	NA	NA	NA	NA	NA	NA	35955799	36040763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35997133_35997167_35998624_35998746_36014471_36014525_36015169_36015309_36032176_36032258_36040649
ENSMUSG00000029095.18_35955831_36040812_1	chr5	+	1596	15	FSM	ENSMUSG00000029095.18	ENST00000361737.9	2623	15	37	990	37	49	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCACCAGTCCCCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	35955830	36040812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35997133_35997167_35998624_35998746_36014471_36014525_36015169_36015309_36032176_36032258_36040649
ENSMUSG00000029095.18_35955896_36040863_1	chr5	+	1582	15	FSM	ENSMUSG00000029095.18	ENST00000361737.9	2623	15	102	939	102	100	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTAGGGCAGGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	35955895	36040863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35997133_35997167_35998624_35998746_36014471_36014525_36015169_36015309_36032176_36032258_36040649
ENSMUSG00000029095.18_35964380_36041162_1	chr5	+	1655	13	ISM	ENSMUSG00000029095.18	ENST00000361737.9	2623	15	8586	640	-7390	-331	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGGGGCAGACTCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	35964379	36041162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35997133_35997167_35998624_35998746_36014471_36014525_36015169_36015309_36032176_36032258_36040649
ENSMUSG00000029095.18_35969470_36041331_1	chr5	+	1578	11	ISM	ENSMUSG00000029095.18	ENST00000361737.9	2623	15	13676	471	-2300	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTGACCTGACAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	35969469	36041331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35997133_35997167_35998624_35998746_36014471_36014525_36015169_36015309_36032176_36032258_36040649
ENSMUSG00000029095.18_35981367_36041493_1	chr5	+	1648	10	ISM	ENSMUSG00000029095.18	ENST00000361737.9	2623	15	25573	309	9583	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGTTTTACGGTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	35981366	36041493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35997133_35997167_35998624_35998746_36014471_36014525_36015169_36015309_36032176_36032258_36040649
ENSMUSG00000029095.18_35994317_36041650_1	chr5	+	1553	7	ISM	ENSMUSG00000029095.18	ENST00000361737.9	2623	15	38523	152	22533	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACAGCCTCAAAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	35994316	36041650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35994442_35997133_35997167_35998624_35998746_36014471_36014525_36015169_36015309_36032176_36032258_36040649
ENSMUSG00000029095.18_35997132_36041810_1	chr5	+	1590	6	ISM	ENSMUSG00000029095.18	ENST00000361737.9	2623	15	41338	-8	25348	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGTCTCACATCAACCT	NA	NA	NA	NA	NA	NA	NA	NA	35997131	36041810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35997167_35998624_35998746_36014471_36014525_36015169_36015309_36032176_36032258_36040649
ENSMUSG00000029096.16_35809841_35825649_1	chr5	-	1237	7	ISM	ENSMUSG00000029096.16	ENSMUST00000087629.10	2750	9	11477	474	11167	-474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGGCTGCTTGCCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	35825649	35809840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35810467_35811414_35811511_35812887_35812937_35821306_35821422_35822757_35822791_35823393_35823589_35825526
ENSMUSG00000029096.16_35810005_35828451_1	chr5	-	1249	8	ISM	ENSMUSG00000029096.16	ENSMUST00000087629.10	2750	9	8675	638	8365	-638	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCACCCCAGCTTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	35828451	35810004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35810467_35811414_35811511_35812887_35812937_35821306_35821422_35822757_35822791_35823393_35823589_35825526_35825750_35828375
ENSMUSG00000029096.16_35810139_35836438_1	chr5	-	1290	9	FSM	ENSMUSG00000029096.16	ENSMUST00000087629.10	2750	9	688	772	378	-772	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTGACCCTTAATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	35836438	35810138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_35810467_35811414_35811511_35812887_35812937_35821306_35821422_35822757_35822791_35823393_35823589_35825526_35825750_35828375_35828476_35836287
ENSMUSG00000029096.16_35819373_35825695_1	chr5	-	748	5	ISM	ENSMUSG00000029096.16	ENSMUST00000114233.3	1901	7	11121	470	11121	-470	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCTCTTGGCCGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	35825695	35819372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35819609_35821306_35821422_35822757_35822791_35823393_35823589_35825526
ENSMUSG00000029096.16_35823450_35837126_1	chr5	-	1301	4	ISM	ENSMUSG00000029096.16	ENSMUST00000114233.3	1901	7	-310	4547	0	-4547	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGTCTCCGGGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	35837126	35823449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35823589_35825526_35825750_35828375_35828476_35836287
ENSMUSG00000029098.18_35745611_35764472_1	chr5	+	1487	13	ISM	ENSMUSG00000029098.18	ENST00000356406.10	1909	15	32	2694	32	-2694	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATCGGAGATACTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	35745610	35764472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425
ENSMUSG00000029098.18_35746034_35765678_1	chr5	+	1515	13	ISM	ENSMUSG00000029098.18	ENST00000356406.10	1909	15	455	1488	455	-1488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGTCTGTCTCCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	35746033	35765678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601
ENSMUSG00000029098.18_35746034_35765678_2	chr5	+	1509	13	NNC	ENSMUSG00000029098.18	novel	1909	15	NA	NA	455	-1488	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGTCTGTCTCCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	35746033	35765678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762556_35762665_35764425_35764542_35765601
ENSMUSG00000029098.18_35747036_35767263_1	chr5	+	1620	12	ISM	ENSMUSG00000029098.18	ENST00000356406.10	1909	15	1457	-97	1457	97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTCTTTGCCACTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	35747035	35767263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765800_35767043
ENSMUSG00000029101.17_35123233_35132625_1	chr5	+	932	2	ISM	ENSMUSG00000029101.17	ENST00000336727.7	4099	15	982	57154	982	-57154	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGAAGATCTAGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	35123232	35132625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35124100_35132560
ENSMUSG00000029101.17_35123346_35176836_1	chr5	+	1044	3	ISM	ENSMUSG00000029101.17	ENST00000336727.7	4099	15	1095	12943	1095	-12943	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCGCTACTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	35123345	35176836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35124100_35132560_35132678_35176663
ENSMUSG00000029101.17_35123493_35177681_1	chr5	+	941	4	ISM	ENSMUSG00000029101.17	ENST00000336727.7	4099	15	1242	12098	1242	-12098	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAACATTTTATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	35123492	35177681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35124100_35132560_35132678_35176663_35176857_35177657
ENSMUSG00000029101.17_35123617_35178485_1	chr5	+	912	5	ISM	ENSMUSG00000029101.17	ENST00000336727.7	4099	15	1366	11294	1366	-11294	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAAATTCCTGTGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	35123616	35178485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35124100_35132560_35132678_35176663_35176857_35177657_35177751_35178459
ENSMUSG00000029101.17_35123668_35178538_1	chr5	+	914	5	ISM	ENSMUSG00000029101.17	ENST00000336727.7	4099	15	1417	11241	1417	-11241	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCTGGCAGATGACATT	NA	NA	NA	NA	NA	NA	NA	NA	35123667	35178538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35124100_35132560_35132678_35176663_35176857_35177657_35177751_35178459
ENSMUSG00000029101.17_35123771_35180006_1	chr5	+	947	6	ISM	ENSMUSG00000029101.17	ENST00000336727.7	4099	15	1520	9773	1520	-9773	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGAGGTGGAGGGACGTA	NA	NA	NA	NA	NA	NA	NA	NA	35123770	35180006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35124100_35132560_35132678_35176663_35176857_35177657_35177751_35178459_35178604_35179935
ENSMUSG00000029101.17_35123816_35180019_1	chr5	+	915	6	ISM	ENSMUSG00000029101.17	ENST00000336727.7	4099	15	1565	9760	1565	-9760	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTACCCTCCCGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	35123815	35180019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35124100_35132560_35132678_35176663_35176857_35177657_35177751_35178459_35178604_35179935
ENSMUSG00000029101.17_35123858_35180092_1	chr5	+	946	6	ISM	ENSMUSG00000029101.17	ENST00000336727.7	4099	15	1607	9687	1607	-9687	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATGTGTCCACACCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35123857	35180092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35124100_35132560_35132678_35176663_35176857_35177657_35177751_35178459_35178604_35179935
ENSMUSG00000029101.17_35123983_35180411_1	chr5	+	883	7	ISM	ENSMUSG00000029101.17	ENST00000336727.7	4099	15	1732	9368	1732	-9368	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGGGGAGGAGGATAG	NA	NA	NA	NA	NA	NA	NA	NA	35123982	35180411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35124100_35132560_35132678_35176663_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372
ENSMUSG00000029101.17_35124023_35180516_1	chr5	+	948	7	ISM	ENSMUSG00000029101.17	ENST00000336727.7	4099	15	1772	9263	1772	-9263	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCCATGGTATGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	35124022	35180516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35124100_35132560_35132678_35176663_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372
ENSMUSG00000029101.17_35124077_35180526_1	chr5	+	904	7	ISM	ENSMUSG00000029101.17	ENST00000336727.7	4099	15	1826	9253	1826	-9253	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGAATGCAGACCATG	NA	NA	NA	NA	NA	NA	NA	NA	35124076	35180526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35124100_35132560_35132678_35176663_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372
ENSMUSG00000029101.17_35132635_35183256_1	chr5	+	948	8	ISM	ENSMUSG00000029101.17	ENST00000336727.7	4099	15	10384	6523	10384	-6523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGACGGGACATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	35132634	35183256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35132678_35176663_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192
ENSMUSG00000029101.17_35176662_35183326_1	chr5	+	977	7	ISM	ENSMUSG00000029101.17	ENSMUST00000114280.8	2777	13	20240	7122	20134	-6453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAACGGCATGGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	35176661	35183326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192
ENSMUSG00000029101.17_35176800_35183689_1	chr5	+	918	8	ISM	ENSMUSG00000029101.17	ENSMUST00000114280.8	2777	13	20378	6759	20272	-6090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCAGCATCCTGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	35176799	35183689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671
ENSMUSG00000029101.17_35178393_35184333_1	chr5	+	1018	7	ISM	ENSMUSG00000029101.17	ENSMUST00000114280.8	2777	13	21971	6115	21865	-5446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTCATTTGGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	35178392	35184333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206
ENSMUSG00000029101.17_35178538_35185939_1	chr5	+	933	8	ISM	ENSMUSG00000029101.17	ENSMUST00000114280.8	2777	13	22116	4509	22010	-3840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATCCTAGAGGAGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	35178537	35185939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879
ENSMUSG00000029101.17_35179933_35187434_1	chr5	+	987	8	ISM	ENSMUSG00000029101.17	ENSMUST00000114280.8	2777	13	23511	3014	23405	-2345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTCCCCTGATGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	35179932	35187434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354
ENSMUSG00000029101.17_35180100_35187965_1	chr5	+	974	9	ISM	ENSMUSG00000029101.17	ENSMUST00000114281.8	3439	14	23699	2970	23572	-1814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGTACTTTTTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	35180099	35187965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811
ENSMUSG00000029101.17_35180463_35189261_1	chr5	+	915	9	ISM	ENSMUSG00000029101.17	ENSMUST00000114281.8	3439	14	24062	1674	23935	-518	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTGGGCTGCTAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	35180462	35189261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811_35187966_35189214
ENSMUSG00000029101.17_35181685_35189396_1	chr5	+	922	8	ISM	ENSMUSG00000029101.17	ENSMUST00000114281.8	3439	14	25284	1539	25157	-383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGGGAGCAGCTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	35181684	35189396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811_35187966_35189214
ENSMUSG00000029101.17_35183673_35189612_1	chr5	+	929	6	ISM	ENSMUSG00000029101.17	ENSMUST00000114281.8	3439	14	27272	1323	27145	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGAGGCTATCACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	35183672	35189612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811_35187966_35189214
ENSMUSG00000029101.17_35184314_35189778_1	chr5	+	915	5	ISM	ENSMUSG00000029101.17	ENSMUST00000114281.8	3439	14	27913	1157	27786	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTCCAGGTTCTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	35184313	35189778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_35184334_35185879_35185977_35187354_35187435_35187811_35187966_35189214
ENSMUSG00000029103.17_35250413_35253402_1	chr5	-	578	3	ISM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	9708	1568	9708	-1568	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCACAACAGTTTATATTG	NA	NA	NA	NA	NA	NA	NA	NA	35253402	35250412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35250731_35252193_35252371_35253319
ENSMUSG00000029103.17_35250639_35255551_1	chr5	-	566	5	ISM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	7559	1794	7559	-1794	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACACTTGAAGACACCG	NA	NA	NA	NA	NA	NA	NA	NA	35255551	35250638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496
ENSMUSG00000029103.17_35252298_35256579_1	chr5	-	515	5	ISM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	6531	3453	6531	-3453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTGAAGCACGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	35256579	35252297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500
ENSMUSG00000029103.17_35254908_35262842_1	chr5	-	534	5	ISM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	268	6063	268	-6063	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCAGCCACCAGGGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	35262842	35254907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ENSMUSG00000029103.17_35254970_35262884_1	chr5	-	514	5	ISM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	226	6125	226	-6125	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCACAGTGAGCTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	35262884	35254969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ENSMUSG00000029103.17_35255497_35263033_1	chr5	-	599	4	ISM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	77	6652	77	-6652	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCCCACGCCCGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35263033	35255496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35255618_35256500_35256623_35259738_35259884_35262822
ENSMUSG00000029106.15_34758686_34771655_1	chr5	+	1114	8	ISM	ENSMUSG00000029106.15	ENSMUST00000052836.14	2337	15	0	16505	0	-16505	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGGGAGCAGGAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	34758685	34771655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527
ENSMUSG00000029106.15_34762040_34774043_1	chr5	+	1097	8	ISM	ENSMUSG00000029106.15	ENSMUST00000052836.14	2337	15	3354	14117	3354	-14117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCACAGTTTTCAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	34762039	34774043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906
ENSMUSG00000029106.15_34767540_34777416_1	chr5	+	1029	8	ISM	ENSMUSG00000029106.15	ENSMUST00000114335.8	4547	18	36154	12222	8854	-10744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGGCAGGACCTCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	34767539	34777416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388
ENSMUSG00000029106.15_34767875_34782693_1	chr5	+	1044	8	ISM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	36658	6959	9189	-5467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCCCAACCCCTTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	34767874	34782693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622
ENSMUSG00000029106.15_34767926_34782757_1	chr5	+	1057	8	ISM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	36709	6895	9240	-5403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAAGCAGAAGGGCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	34767925	34782757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622
ENSMUSG00000029106.15_34771591_34788085_1	chr5	+	1086	7	ISM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	40374	1567	12905	-75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCCCATCCAAAAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	34771590	34788085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ENSMUSG00000029106.15_34773970_34788245_1	chr5	+	1069	6	ISM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	42753	1407	15284	85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGGAATGCAAACAACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	34773969	34788245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ENSMUSG00000029106.15_34774111_34788306_1	chr5	+	989	6	ISM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	42894	1346	15425	146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCACCAGTGCTAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	34774110	34788306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ENSMUSG00000029106.15_34776698_34788427_1	chr5	+	1058	5	ISM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	45481	1225	18012	267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCCTGGCTGGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	34776697	34788427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ENSMUSG00000029106.15_34782699_34788670_1	chr5	+	1037	3	ISM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	51482	982	24013	510	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATGTCCATCAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	34782698	34788670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34782780_34785758_34785858_34787813
ENSMUSG00000029106.15_34785794_34788782_1	chr5	+	1033	2	ISM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	54577	870	27108	622	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAACTGGTGACCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	34785793	34788782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34785858_34787813
ENSMUSG00000029110.14_34493633_34509479_2	chr5	+	1744	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	0	-1289	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTACCCATGCTCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	34493632	34509479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34507255_34507416_34508133_34508183_34508574
ENSMUSG00000029110.14_34493790_34509651_1	chr5	+	1747	7	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	66	-1117	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAGGTGGTAGCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	34493789	34509651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34507255_34507416_34508133_34508183_34508574
ENSMUSG00000029110.14_34493790_34509651_2	chr5	+	1759	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	66	-1117	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAGGTGGTAGCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	34493789	34509651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34507255_34507416_34508133_34508183_34508574
ENSMUSG00000029110.14_34504119_34509851_1	chr5	+	1705	5	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	9843	-917	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTCAGTGGGTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	34504118	34509851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_34504246_34506007_34506100_34507255_34507416_34508133_34508183_34508574
ENSMUSG00000029110.14_34504119_34509851_2	chr5	+	1693	5	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	9843	-917	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTCAGTGGGTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	34504118	34509851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_+_34504246_34506007_34506088_34507255_34507416_34508133_34508183_34508574
ENSMUSG00000029110.14_34506007_34510005_1	chr5	+	1721	4	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	11731	-763	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGATAGGCCTTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	34506006	34510005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_+_34506088_34507255_34507416_34508133_34508183_34508574
ENSMUSG00000029110.14_34506007_34510005_2	chr5	+	1733	4	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	11731	-763	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGATAGGCCTTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	34506006	34510005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_34506100_34507255_34507416_34508133_34508183_34508574
ENSMUSG00000029110.14_34508134_34510204_1	chr5	+	1679	2	ISM	ENSMUSG00000029110.14	ENSMUST00000182047.2	2944	8	13858	564	13858	-564	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAAGGAGTGGCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	34508133	34510204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34508183_34508574
ENSMUSG00000029110.14_34508163_34510287_1	chr5	+	1733	2	ISM	ENSMUSG00000029110.14	ENSMUST00000182047.2	2944	8	13887	481	13887	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGAATGAGAGTAATAGG	NA	NA	NA	NA	NA	NA	NA	NA	34508162	34510287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34508183_34508574
ENSMUSG00000029111.8_34055260_34060733_1	chr5	-	1787	8	ISM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	33024	0	33024	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTCCACTTTAAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	34060733	34055259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714
ENSMUSG00000029111.8_34055489_34077909_1	chr5	-	1703	9	ISM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	15848	229	15848	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCCTGCTCTGAGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	34077909	34055488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835
ENSMUSG00000029111.8_34055662_34079274_1	chr5	-	1703	10	ISM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	14483	402	14483	-402	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCTATGACCAGCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	34079274	34055661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189
ENSMUSG00000029111.8_34055726_34079327_1	chr5	-	1692	10	ISM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	14430	466	14430	-466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCCCTCCCTCATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	34079327	34055725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189
ENSMUSG00000029111.8_34055876_34093477_1	chr5	-	1684	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	280	616	280	-616	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTTTTTTTTATTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	34093477	34055875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ENSMUSG00000029111.8_34055927_34093594_1	chr5	-	1750	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	163	667	163	-667	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTAGGCTTATTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	34093594	34055926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ENSMUSG00000029111.8_34055987_34093594_1	chr5	-	1690	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	163	727	163	-727	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGCTCCACCCAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	34093594	34055986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ENSMUSG00000029121.17_37399548_37449445_1	chr5	+	2895	14	FSM	ENSMUSG00000029121.17	ENSMUST00000114158.9	3051	14	124	32	124	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAGAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	37399547	37449445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_37399870_37422575_37422665_37426026_37426212_37430690_37430856_37433620_37433683_37435428_37435510_37436206_37436276_37437002_37437124_37437810_37437968_37440195_37440338_37441371_37441543_37443711_37443892_37446148_37446315_37448460
ENSMUSG00000029121.17_37399698_37449482_1	chr5	+	2782	14	FSM	ENSMUSG00000029121.17	ENSMUST00000114158.9	3051	14	274	-5	274	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGTTTTCACTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	37399697	37449482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_37399870_37422575_37422665_37426026_37426212_37430690_37430856_37433620_37433683_37435428_37435510_37436206_37436276_37437002_37437124_37437810_37437968_37440195_37440338_37441371_37441543_37443711_37443892_37446148_37446315_37448460
ENSMUSG00000029126.8_38294536_38302165_1	chr5	-	1793	2	NNC	ENSMUSG00000029126.8	novel	2581	5	NA	NA	14210	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGACTGTCTGTACTCA	NA	NA	NA	NA	NA	NA	NA	NA	38302165	38294535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_38296217_38302053
ENSMUSG00000029126.8_38294536_38312970_1	chr5	-	1811	3	ISM	ENSMUSG00000029126.8	ENSMUST00000031009.8	2581	5	4281	0	3405	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGACTGTCTGTACTCA	NA	NA	NA	NA	NA	NA	NA	NA	38312970	38294535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_38296217_38302052_38302164_38312951
ENSMUSG00000029126.8_38294654_38313017_1	chr5	-	1740	3	ISM	ENSMUSG00000029126.8	ENSMUST00000031009.8	2581	5	4234	118	3358	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGTAGGCAGGCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	38313017	38294653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_38296217_38302052_38302164_38312951
ENSMUSG00000029126.8_38294701_38313068_1	chr5	-	1744	3	ISM	ENSMUSG00000029126.8	ENSMUST00000031009.8	2581	5	4183	165	3307	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCCAAAACTTGTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	38313068	38294700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_38296217_38302052_38302164_38312951
ENSMUSG00000029126.8_38294903_38316823_1	chr5	-	1786	5	FSM	ENSMUSG00000029126.8	ENSMUST00000031009.8	2581	5	428	367	-74	-367	multi-exon	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGAGACCTTTGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	38316823	38294902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_38296217_38302052_38302164_38312951_38313069_38316220_38316376_38316734
ENSMUSG00000029126.8_38295161_38317060_1	chr5	-	1765	5	FSM	ENSMUSG00000029126.8	ENSMUST00000031009.8	2581	5	191	625	191	439	multi-exon	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGATGTGGCACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	38317060	38295160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_38296217_38302052_38302164_38312951_38313069_38316220_38316376_38316734
ENSMUSG00000029128.13_41782782_41784361_1	chr5	-	456	2	ISM	ENSMUSG00000029128.13	ENSMUST00000201422.4	1697	8	81103	463	81103	-460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGATCATTTTCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	41784361	41782781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_41783206_41784329
ENSMUSG00000029128.13_41782871_41790565_1	chr5	-	385	2	ISM	ENSMUSG00000029128.13	ENSMUST00000031011.12	1635	7	74932	552	74899	-549	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAAGAACCATGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	41790565	41782870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_41783206_41790515
ENSMUSG00000029128.13_41782930_41790585_1	chr5	-	441	3	ISM	ENSMUSG00000029128.13	ENSMUST00000201422.4	1697	8	74879	611	74879	-608	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACGTTTTGAAATCCGA	NA	NA	NA	NA	NA	NA	NA	NA	41790585	41782929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_41783206_41784329_41784425_41790515
ENSMUSG00000029128.13_41782956_41790593_1	chr5	-	328	2	ISM	ENSMUSG00000029128.13	ENSMUST00000031011.12	1635	7	74904	637	74871	-634	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCGGAAGGAGTGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	41790593	41782955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_41783206_41790515
ENSMUSG00000029128.13_41790549_41865335_1	chr5	-	423	5	ISM	ENSMUSG00000029128.13	ENST00000630951.1	1621	7	186	8227	129	-8227	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTAAACAAAGCAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	41865335	41790548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_41790594_41793148_41793253_41855732_41855822_41860780_41860878_41865247
ENSMUSG00000029128.13_41793147_41860877_1	chr5	-	422	4	ISM	ENSMUSG00000029128.13	ENSMUST00000201422.4	1697	8	4587	10828	4587	-10825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAAGCAATGGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	41860877	41793146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_41793253_41845063_41845194_41855732_41855822_41860780
ENSMUSG00000029128.13_41793207_41865308_1	chr5	-	423	5	ISM	ENSMUSG00000029128.13	ENSMUST00000201422.4	1697	8	156	10888	156	-10885	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGCCAGGAAAATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	41865308	41793206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ENSMUSG00000029130.13_29403669_29430524_1	chr5	+	1230	7	ISM	ENSMUSG00000029130.13	ENSMUST00000168460.8	1107	8	665	-235	665	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTAGTGTCTGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	29403668	29430524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_29403837_29408052_29408196_29410666_29410700_29411171_29411297_29411693_29411803_29429114_29429283_29430040
ENSMUSG00000029131.15_29940686_29970625_1	chr5	+	1058	7	ISM	ENSMUSG00000029131.15	ENSMUST00000114839.8	1605	8	-252	1476	0	-1476	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATCACGACAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	29940685	29970625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503
ENSMUSG00000029131.15_29940938_29986223_1	chr5	+	993	9	ISM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	252	5253	0	-4415	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTCCCAGGCCCGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	29940937	29986223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127
ENSMUSG00000029131.15_29940987_29972102_1	chr5	+	1550	8	NNC	ENSMUSG00000029131.15	novel	1605	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCTTGTGTCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	29940986	29972102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_29941108_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
ENSMUSG00000029131.15_29940987_29972102_2	chr5	+	1549	8	NNC	ENSMUSG00000029131.15	novel	1605	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCTTGTGTCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	29940986	29972102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_29941115_29953342_29953434_29955935_29956046_29957402_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
ENSMUSG00000029131.15_29940987_29986269_1	chr5	+	990	9	ISM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	301	5207	0	-4369	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCAACTCCAGCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	29940986	29986269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127
ENSMUSG00000029131.15_29941031_29972102_1	chr5	+	1513	8	FSM	ENSMUSG00000029131.15	ENSMUST00000114839.8	1605	8	93	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCTTGTGTCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	29941030	29972102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
ENSMUSG00000029131.15_29941031_29986343_1	chr5	+	1020	9	ISM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	345	5133	0	-4295	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTGCCCCAACGGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	29941030	29986343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127
ENSMUSG00000029131.15_29955965_29990103_1	chr5	+	996	8	ISM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	15279	1373	14934	-535	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTAGGCTGGACTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	29955964	29990103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127_29986449_29990028
ENSMUSG00000029131.15_29958580_29990284_1	chr5	+	993	6	ISM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	17894	1192	17549	-354	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCAACAATCCCGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	29958579	29990284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127_29986449_29990028
ENSMUSG00000029131.15_29970566_29990638_1	chr5	+	1082	4	ISM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	29880	838	29535	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTCAGATAGAGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	29970565	29990638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_29970646_29971322_29971394_29986127_29986449_29990028
ENSMUSG00000029131.15_29970627_29990638_1	chr5	+	1021	4	ISM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	29941	838	29596	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTCAGATAGAGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	29970626	29990638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_29970646_29971322_29971394_29986127_29986449_29990028
ENSMUSG00000029131.15_29986208_29990788_1	chr5	+	1001	2	ISM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	45522	688	45177	150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAGCAATACCATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	29986207	29990788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_29986449_29990028
ENSMUSG00000029131.15_29986347_29990900_1	chr5	+	974	2	ISM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	45661	576	45316	262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGGCCCCTTCACAAGC	NA	NA	NA	NA	NA	NA	NA	NA	29986346	29990900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_29986449_29990028
ENSMUSG00000029131.15_29986386_29990974_1	chr5	+	1009	2	ISM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	45700	502	45355	336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGGAATTCTGATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	29986385	29990974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_29986449_29990028
ENSMUSG00000029141.17_31684594_31685549_1	chr5	+	598	2	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	238	8617	-43	-8617	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGATGAGCTGGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	31684593	31685549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31685029_31685386
ENSMUSG00000029141.17_31684789_31689362_1	chr5	+	605	4	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	433	4804	152	-4804	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGCAGGGTGAGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	31684788	31689362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316
ENSMUSG00000029141.17_31684945_31691425_1	chr5	+	641	6	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	589	2741	308	-2741	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTTTATGATAGTGACG	NA	NA	NA	NA	NA	NA	NA	NA	31684944	31691425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388
ENSMUSG00000029141.17_31685385_31691549_1	chr5	+	683	5	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	1029	2617	748	-2617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTTGTTCATAGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	31685384	31691549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388
ENSMUSG00000029141.17_31688022_31693568_1	chr5	+	597	6	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	3666	598	3385	-598	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTCACCTGAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	31688021	31693568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481
ENSMUSG00000029141.17_31688073_31693625_1	chr5	+	603	6	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	3717	541	3436	-541	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAAAACTTGTAAAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	31688072	31693625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481
ENSMUSG00000029141.17_31689883_31701041_1	chr5	+	603	6	ISM	ENSMUSG00000029141.17	ENST00000618046.4	2167	14	5246	10297	5246	6875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGCTTTAATGCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	31689882	31701041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013
ENSMUSG00000029141.17_31691495_31701188_1	chr5	+	599	5	ISM	ENSMUSG00000029141.17	ENST00000618046.4	2167	14	6858	10150	-6260	7022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGCAGCAGTGGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	31691494	31701188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013
ENSMUSG00000029141.17_31693604_31708087_1	chr5	+	610	6	ISM	ENSMUSG00000029141.17	ENSMUST00000202950.4	2499	14	9248	3299	-4151	-3045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGACCCAGACTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	31693603	31708087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31693669_31697729_31697842_31701013_31701258_31703523_31703611_31705954_31706026_31708056
ENSMUSG00000029141.17_31697784_31711132_1	chr5	+	571	6	NNC	ENSMUSG00000029141.17	novel	606	6	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1065	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTCAGAGTCCCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	31697783	31711132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_31697842_31701013_31701258_31703523_31703611_31705963_31706026_31708056_31708127_31711082
ENSMUSG00000029141.17_31697784_31711132_2	chr5	+	580	6	ISM	ENSMUSG00000029141.17	ENSMUST00000202950.4	2499	14	13428	254	29	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTCAGAGTCCCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	31697783	31711132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31697842_31701013_31701258_31703523_31703611_31705954_31706026_31708056_31708127_31711082
ENSMUSG00000029146.15_31350571_31355090_1	chr5	+	1280	11	ISM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	0	1154	0	-1154	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAGCCCACCCTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	31350570	31355090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964
ENSMUSG00000029146.15_31350571_31355284_1	chr5	+	1358	12	ISM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	0	960	0	-960	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	733	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCGGCGGCAGAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	31350570	31355284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206
ENSMUSG00000029146.15_31350679_31353608_1	chr5	+	604	6	ISM	ENSMUSG00000029146.15	ENST00000537606.5	2312	14	111	3002	108	-2636	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGGGCAGAGCCTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	31350678	31353608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31350810_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520
ENSMUSG00000029146.15_31350679_31355488_1	chr5	+	1325	13	ISM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	108	756	108	-756	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTAATGTCAGCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	31350678	31355488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413
ENSMUSG00000029146.15_31350781_31355621_1	chr5	+	1265	14	ISM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	210	623	210	-623	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTACAGGGTTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	31350780	31355621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579
ENSMUSG00000029146.15_31351198_31355726_1	chr5	+	1276	14	ISM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	627	518	627	-518	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGATTGGCAGTCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	31351197	31355726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ENSMUSG00000029146.15_31352187_31355867_1	chr5	+	1280	13	ISM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	1616	377	1616	-377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTGCCTATGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	31352186	31355867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ENSMUSG00000029146.15_31352717_31355993_1	chr5	+	1377	12	ISM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	2146	251	2146	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCTCTTTTTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	31352716	31355993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ENSMUSG00000029146.15_31353086_31355993_1	chr5	+	1274	11	ISM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	2515	251	2515	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCTCTTTTTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	31353085	31355993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ENSMUSG00000029146.15_31353521_31356244_1	chr5	+	1319	9	ISM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	2950	0	2950	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTCCCTCTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	31353520	31356244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ENSMUSG00000029147.12_31360012_31361503_1	chr5	-	850	3	ISM	ENSMUSG00000029147.12	ENSMUST00000202294.4	1868	10	16406	4	16406	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGCTCATAGTGTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	31361503	31360011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31360629_31360915_31361019_31361373
ENSMUSG00000029147.12_31360115_31361878_1	chr5	-	829	4	ISM	ENSMUSG00000029147.12	ENSMUST00000202294.4	1868	10	16031	107	16031	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTTATTGGCGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	31361878	31360114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796
ENSMUSG00000029147.12_31360214_31362016_1	chr5	-	868	4	ISM	ENSMUSG00000029147.12	ENSMUST00000202294.4	1868	10	15893	206	15893	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCATCGACTATCGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	31362016	31360213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796
ENSMUSG00000029147.12_31360446_31363476_1	chr5	-	878	6	ISM	ENSMUSG00000029147.12	ENSMUST00000202294.4	1868	10	14433	438	14433	-434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGGCCAAGAGGGACTA	NA	NA	NA	NA	NA	NA	NA	NA	31363476	31360445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341_31362474_31363381
ENSMUSG00000029147.12_31360446_31363508_1	chr5	-	910	6	ISM	ENSMUSG00000029147.12	ENSMUST00000202294.4	1868	10	14401	438	14401	-434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGGCCAAGAGGGACTA	NA	NA	NA	NA	NA	NA	NA	NA	31363508	31360445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341_31362474_31363381
ENSMUSG00000029147.12_31360582_31363559_1	chr5	-	825	6	ISM	ENSMUSG00000029147.12	ENSMUST00000202294.4	1868	10	14350	574	14350	-570	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGACAACATGACGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	31363559	31360581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341_31362474_31363381
ENSMUSG00000029147.12_31360916_31363683_1	chr5	-	902	5	ISM	ENSMUSG00000029147.12	ENSMUST00000202294.4	1868	10	14226	908	14226	-904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTAAAGTTGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	31363683	31360915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31361019_31361373_31361504_31361796_31362032_31362341_31362474_31363381
ENSMUSG00000029147.12_31361373_31363797_1	chr5	-	914	4	ISM	ENSMUSG00000029147.12	ENSMUST00000202294.4	1868	10	14112	1365	14112	-1361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCACTGGTGAAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	31363797	31361372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31361504_31361796_31362032_31362341_31362474_31363381
ENSMUSG00000029147.12_31361796_31365039_1	chr5	-	917	4	ISM	ENSMUSG00000029147.12	ENSMUST00000031032.11	2307	10	12992	1784	12870	-1784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGACTAAGAAACTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	31365039	31361795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31362032_31362341_31362474_31363381_31363798_31364906
ENSMUSG00000029147.12_31361952_31365410_1	chr5	-	815	5	ISM	ENSMUSG00000029147.12	ENSMUST00000031032.11	2307	10	12621	1940	12499	-1940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGTGTGGTGTCCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	31365410	31361951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31362032_31362341_31362474_31363381_31363798_31364906_31365040_31365356
ENSMUSG00000029147.12_31362006_31365774_1	chr5	-	837	6	ISM	ENSMUSG00000029147.12	ENSMUST00000031032.11	2307	10	12257	1994	12135	-1994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTGGCTCTGATCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	31365774	31362005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31362032_31362341_31362474_31363381_31363798_31364906_31365040_31365356_31365443_31365730
ENSMUSG00000029147.12_31362434_31377663_1	chr5	-	762	6	ISM	ENSMUSG00000029147.12	ENSMUST00000031032.11	2307	10	368	2422	246	-2422	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGAACGAGGAAGACGAG	NA	NA	NA	NA	NA	NA	NA	NA	31377663	31362433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31362474_31363381_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
ENSMUSG00000029147.12_31363420_31377909_1	chr5	-	930	5	ISM	ENSMUSG00000029147.12	ENSMUST00000031032.11	2307	10	122	3408	0	-3408	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAGATGAGGTGGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	31377909	31363419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
ENSMUSG00000029148.16_31398208_31408444_1	chr5	+	1737	18	FSM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	0	466	0	-460	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCCACTGTCACCGTC	NA	NA	NA	NA	NA	NA	NA	NA	31398207	31408444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ENSMUSG00000029148.16_31398247_31408500_1	chr5	+	1754	18	FSM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	39	410	39	-404	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGGCTGTCCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	31398246	31408500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ENSMUSG00000029148.16_31398276_31408519_1	chr5	+	1744	18	FSM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	68	391	68	-385	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGCAGTCCTCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	31398275	31408519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ENSMUSG00000029148.16_31398276_31408553_1	chr5	+	1778	18	FSM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	68	357	68	-351	multi-exon	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTACCCTTCGCGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	31398275	31408553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ENSMUSG00000029148.16_31401105_31408642_1	chr5	+	1793	17	NNC	ENSMUSG00000029148.16	novel	2203	18	NA	NA	2897	-262	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCACTTTGTTTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	31401104	31408642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408240_31408292_31408368
ENSMUSG00000029148.16_31401159_31408793_1	chr5	+	1895	17	ISM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	2951	117	2951	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGCTGGGGCGCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	31401158	31408793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ENSMUSG00000029148.16_31401508_31408793_1	chr5	+	1720	16	ISM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	3300	117	3300	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGCTGGGGCGCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	31401507	31408793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ENSMUSG00000029148.16_31401508_31408910_1	chr5	+	1837	16	ISM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	3300	0	3300	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTGTGCTTGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	31401507	31408910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ENSMUSG00000029148.16_31401577_31408907_1	chr5	+	1765	16	ISM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	3369	3	3369	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCTTGTGTTGTGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	31401576	31408907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ENSMUSG00000029148.16_31401800_31408910_1	chr5	+	1709	15	NNC	ENSMUSG00000029148.16	novel	2203	18	NA	NA	3592	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTGTGCTTGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	31401799	31408910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408240_31408292_31408368
ENSMUSG00000029149.15_31409271_31412152_1	chr5	+	803	6	NNC	ENSMUSG00000029149.15	novel	813	6	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGGCAGAGCCAGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	31409270	31412152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410352_31412041
ENSMUSG00000029149.15_31409271_31412152_2	chr5	+	801	6	NNC	ENSMUSG00000029149.15	novel	813	6	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGGCAGAGCCAGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	31409270	31412152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410244_31410352_31412037
ENSMUSG00000029149.15_31409271_31412152_3	chr5	+	807	6	FSM	ENSMUSG00000029149.15	ENST00000543753.5	813	6	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGGCAGAGCCAGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	31409270	31412152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410352_31412037
ENSMUSG00000029149.15_31409271_31412152_4	chr5	+	802	6	NIC	ENSMUSG00000029149.15	novel	813	6	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGGCAGAGCCAGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	31409270	31412152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_+_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31412037
ENSMUSG00000029152.14_73450175_73470916_1	chr5	+	987	9	FSM	ENSMUSG00000029152.14	ENSMUST00000031038.11	1523	9	40	496	0	-160	multi-exon	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTCATAAATACAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	73450174	73470916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ENSMUSG00000029152.14_73450184_73470884_1	chr5	+	940	9	NNC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	9	-192	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTACCTACATGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	73450183	73470884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470791
ENSMUSG00000029152.14_73450238_73471300_1	chr5	+	1200	8	FSM	ENSMUSG00000029152.14	ENSMUST00000071081.13	1311	8	111	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGGCTTTGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	73450237	73471300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464142_73470785
ENSMUSG00000029152.14_73451626_73471076_1	chr5	+	923	7	FSM	ENSMUSG00000029152.14	ENST00000509122.5	916	7	-7	0	-7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTTACAGGGAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	73451625	73471076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_73451691_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ENSMUSG00000029152.14_73451626_73471076_2	chr5	+	1004	8	ISM	ENSMUSG00000029152.14	ENSMUST00000031038.11	1523	9	1491	336	-7	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTTACAGGGAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	73451625	73471076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ENSMUSG00000029152.14_73458007_73471257_1	chr5	+	1039	6	ISM	ENSMUSG00000029152.14	ENST00000509122.5	916	7	6374	-181	6374	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGATGAATAAAATGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	73458006	73471257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ENSMUSG00000029152.14_73463920_73471412_1	chr5	+	957	3	ISM	ENSMUSG00000029152.14	ENST00000509122.5	916	7	12287	-336	12287	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTCTTTTTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	73463919	73471412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_73464097_73467616_73467770_73470785
ENSMUSG00000029153.12_73479790_73493250_1	chr5	-	1806	6	ISM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	3085	248	2651	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTGCGTGTGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	73493250	73479789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162
ENSMUSG00000029153.12_73480000_73496056_1	chr5	-	1817	7	FSM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	279	458	-155	-444	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTAGCTGAGCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	73496056	73479999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
ENSMUSG00000029153.12_73480068_73496123_1	chr5	-	1816	7	FSM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	212	526	168	-512	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCTCCTCCAGCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	73496123	73480067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
ENSMUSG00000029153.12_73480249_73496291_1	chr5	-	1803	7	FSM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	44	707	0	440	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAACAACCACATGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	73496291	73480248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
ENSMUSG00000029156.12_73791577_73796764_1	chr5	-	1504	2	ISM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	8369	1485	8369	-1485	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACGAGAATAAAGGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	73796764	73791576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_73793042_73796725
ENSMUSG00000029156.12_73791628_73796821_1	chr5	-	1510	2	ISM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	8312	1536	8312	-1536	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCAGCATCACCCTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	73796821	73791627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_73793042_73796725
ENSMUSG00000029156.12_73791733_73797186_1	chr5	-	1496	3	ISM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	7947	1641	7947	-1641	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCTGGCATACTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	73797186	73791732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_73793042_73796725_73796858_73797131
ENSMUSG00000029156.12_73791782_73797259_1	chr5	-	1520	3	ISM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	7874	1690	7874	-1690	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCAGCTTGGTCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	73797259	73791781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_73793042_73796725_73796858_73797131
ENSMUSG00000029156.12_73791914_73798056_1	chr5	-	1483	4	ISM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	7077	1822	7077	-1822	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTCACCTAACAGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	73798056	73791913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025
ENSMUSG00000029156.12_73792195_73801824_1	chr5	-	1567	5	ISM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	3309	2103	3309	-2103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCAGGCCTCTTCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	73801824	73792194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614
ENSMUSG00000029156.12_73792333_73805133_1	chr5	-	1545	6	FSM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	0	2241	0	-2241	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATGTTTCCTTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	73805133	73792332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73805017
ENSMUSG00000029161.8_31090487_31091775_1	chr5	-	1021	3	ISM	ENSMUSG00000029161.8	ENSMUST00000031051.8	1442	6	11160	0	11110	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTCCTTGGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	31091775	31090486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31091333_31091503_31091626_31091722
ENSMUSG00000029161.8_31090487_31102750_1	chr5	-	847	7	FSM	ENSMUSG00000029161.8	ENST00000402394.6	921	7	135	-61	135	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTCCTTGGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	31102750	31090486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_31090565_31090968_31091333_31091503_31091626_31091722_31091794_31091886_31091953_31093221_31093319_31102701
ENSMUSG00000029161.8_31090690_31093304_1	chr5	-	985	5	ISM	ENSMUSG00000029161.8	ENST00000402394.6	921	7	9581	142	9581	-142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGCCACATAGCAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	31093304	31090689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31091333_31091503_31091626_31091722_31091794_31091886_31091953_31093221
ENSMUSG00000029161.8_31090969_31102935_1	chr5	-	944	6	NNC	ENSMUSG00000029161.8	novel	921	7	NA	NA	0	-421	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGAGGAACAGGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	31102935	31090968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_31091323_31091503_31091626_31091722_31091794_31091886_31091953_31093221_31093319_31102701
ENSMUSG00000029162.16_31079177_31088594_1	chr5	+	1183	8	FSM	ENSMUSG00000029162.16	ENST00000260599.10	1243	8	60	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTCTGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	31079176	31088594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_31079352_31082082_31082200_31084031_31084167_31085786_31085860_31086864_31087012_31087891_31087981_31088059_31088218_31088305
ENSMUSG00000029166.15_30972077_31022946_1	chr5	+	1425	7	FSM	ENSMUSG00000029166.15	ENSMUST00000031058.15	2021	7	92	504	-21	399	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCCTTGCACTTTACC	NA	NA	NA	NA	NA	NA	NA	NA	30972076	31022946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_30972243_31019150_31019279_31019841_31019988_31020547_31020750_31021917_31022073_31022158_31022312_31022471
ENSMUSG00000029166.15_30972104_31023001_1	chr5	+	1453	7	FSM	ENSMUSG00000029166.15	ENSMUST00000031058.15	2021	7	119	449	6	-402	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTTCTGGCTTGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	30972103	31023001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_30972243_31019150_31019279_31019841_31019988_31020547_31020750_31021917_31022073_31022158_31022312_31022471
ENSMUSG00000029166.15_30972104_31023053_1	chr5	+	1505	7	FSM	ENSMUSG00000029166.15	ENSMUST00000031058.15	2021	7	119	397	6	-350	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATTCTTATTTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	30972103	31023053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_30972243_31019150_31019279_31019841_31019988_31020547_31020750_31021917_31022073_31022158_31022312_31022471
ENSMUSG00000029166.15_31019181_31023180_1	chr5	+	1463	6	ISM	ENSMUSG00000029166.15	ENSMUST00000031058.15	2021	7	47196	270	7952	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCCAGGCACTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	31019180	31023180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31019279_31019841_31019988_31020547_31020750_31021917_31022073_31022158_31022312_31022471
ENSMUSG00000029166.15_31019232_31023244_1	chr5	+	1476	6	ISM	ENSMUSG00000029166.15	ENSMUST00000031058.15	2021	7	47247	206	8003	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTCCTAGCCACTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	31019231	31023244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31019279_31019841_31019988_31020547_31020750_31021917_31022073_31022158_31022312_31022471
ENSMUSG00000029166.15_31019872_31023403_1	chr5	+	1558	5	ISM	ENSMUSG00000029166.15	ENSMUST00000031058.15	2021	7	47887	47	8643	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGATTTCCTCAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	31019871	31023403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31019988_31020547_31020750_31021917_31022073_31022158_31022312_31022471
ENSMUSG00000029166.15_31019929_31023403_1	chr5	+	1501	5	ISM	ENSMUSG00000029166.15	ENSMUST00000031058.15	2021	7	47944	47	8700	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGATTTCCTCAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	31019928	31023403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31019988_31020547_31020750_31021917_31022073_31022158_31022312_31022471
ENSMUSG00000029167.14_51614995_51701931_1	chr5	-	3165	12	NNC	ENSMUSG00000029167.14	novel	3178	12	NA	NA	33	2	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGGAAAGAAAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	51701931	51614994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_51615626_51620047_51620200_51620547_51620664_51629939_51630061_51630220_51630326_51630837_51631754_51647358_51647433_51647541_51647588_51651942_51652148_51653011_51653138_51655375_51655571_51701453
ENSMUSG00000029167.14_51614995_51701931_2	chr5	-	3162	12	NNC	ENSMUSG00000029167.14	novel	3178	12	NA	NA	33	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGGAAAGAAAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	51701931	51614994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_51615626_51620047_51620200_51620547_51620670_51629939_51630052_51630220_51630326_51630837_51631754_51647358_51647433_51647541_51647588_51651942_51652148_51653011_51653138_51655375_51655571_51701453
ENSMUSG00000029167.14_51614995_51701931_3	chr5	-	3165	12	NNC	ENSMUSG00000029167.14	novel	3178	12	NA	NA	33	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGGAAAGAAAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	51701931	51614994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_51615626_51620047_51620200_51620547_51620670_51629939_51630061_51630220_51630326_51630837_51631754_51647358_51647433_51647541_51647588_51651942_51652148_51653011_51653132_51655375_51655571_51701453
ENSMUSG00000029167.14_51614995_51701931_4	chr5	-	3171	12	FSM	ENSMUSG00000029167.14	ENST00000613098.4	3178	12	33	-26	33	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGGAAAGAAAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	51701931	51614994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_51615626_51620047_51620200_51620547_51620670_51629939_51630061_51630220_51630326_51630837_51631754_51647358_51647433_51647541_51647588_51651942_51652148_51653011_51653138_51655375_51655571_51701453
ENSMUSG00000029167.14_51614995_51701931_5	chr5	-	3165	12	NNC	ENSMUSG00000029167.14	novel	3178	12	NA	NA	33	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGGAAAGAAAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	51701931	51614994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_51615626_51620047_51620200_51620547_51620670_51629939_51630061_51630220_51630326_51630837_51631754_51647358_51647433_51647541_51647588_51651942_51652148_51653017_51653138_51655375_51655571_51701453
ENSMUSG00000029167.14_51614995_51701931_6	chr5	-	3165	12	NNC	ENSMUSG00000029167.14	novel	3178	12	NA	NA	33	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGGAAAGAAAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	51701931	51614994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_51615626_51620047_51620200_51620547_51620670_51629939_51630061_51630220_51630326_51630837_51631754_51647358_51647433_51647541_51647588_51651942_51652142_51653011_51653138_51655375_51655571_51701453
ENSMUSG00000029167.14_51614995_51701931_7	chr5	-	3168	12	NNC	ENSMUSG00000029167.14	novel	3178	12	NA	NA	33	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGGAAAGAAAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	51701931	51614994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_51615626_51620047_51620200_51620547_51620670_51629939_51630061_51630220_51630326_51630837_51631754_51647358_51647433_51647541_51647588_51651942_51652148_51653011_51653138_51655375_51655564_51701449
ENSMUSG00000029167.14_51614995_51701931_8	chr5	-	3165	12	NNC	ENSMUSG00000029167.14	novel	3178	12	NA	NA	33	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGGAAAGAAAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	51701931	51614994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_51615626_51620047_51620194_51620547_51620670_51629939_51630061_51630220_51630326_51630837_51631754_51647358_51647433_51647541_51647588_51651942_51652148_51653011_51653138_51655375_51655571_51701453
ENSMUSG00000029168.15_30902723_30941726_1	chr5	+	709	7	ISM	ENSMUSG00000029168.15	ENST00000288699.11	3250	13	157	14987	157	-14987	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCGCATGCAGCCGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	30902722	30941726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654
ENSMUSG00000029168.15_30948940_30953905_1	chr5	+	741	4	ISM	ENSMUSG00000029168.15	ENST00000288699.11	3250	13	46374	2808	46374	-2808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTTTCTCTGGGCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	30948939	30953905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_30948979_30949463_30949672_30951277_30951447_30953580
ENSMUSG00000029168.15_30949567_30954015_1	chr5	+	709	3	ISM	ENSMUSG00000029168.15	ENST00000288699.11	3250	13	47001	2698	47001	-2698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACTTTAGTGCTCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	30949566	30954015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_30949672_30951277_30951447_30953580
ENSMUSG00000029168.15_30951285_30954154_1	chr5	+	736	2	ISM	ENSMUSG00000029168.15	ENST00000288699.11	3250	13	48719	2559	48719	-2559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCACAGCCATGCCCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	30951284	30954154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_30951447_30953580
ENSMUSG00000029168.15_30953904_30956110_1	chr5	+	709	2	NNC	ENSMUSG00000029168.15	novel	3250	13	NA	NA	51338	-603	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGAGCTTCTAGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	30953903	30956110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_30954347_30955844
ENSMUSG00000029168.15_30954045_30956306_1	chr5	+	764	2	NNC	ENSMUSG00000029168.15	novel	3250	13	NA	NA	51479	-407	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTAGCTGCTTTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	30954044	30956306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_30954347_30955844
ENSMUSG00000029169.12_52307545_52319957_1	chr5	-	1598	8	ISM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	27899	0	27874	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCTGTATCTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	52319957	52307544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870
ENSMUSG00000029169.12_52307689_52324210_1	chr5	-	1622	9	ISM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	23646	144	23621	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTATGCATGATCGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	52324210	52307688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042
ENSMUSG00000029169.12_52307910_52327481_1	chr5	-	1620	10	ISM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	20375	365	20350	-365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTTATTTGAAAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	52327481	52307909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262
ENSMUSG00000029169.12_52308035_52328843_1	chr5	-	1573	11	ISM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	19013	490	18988	-490	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTCAATCCAAGGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	52328843	52308034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765
ENSMUSG00000029169.12_52309206_52338341_1	chr5	-	1533	11	ISM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	9515	1661	9490	-1661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCTGACGACAAAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	52338341	52309205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323
ENSMUSG00000029169.12_52309244_52338407_1	chr5	-	1561	11	ISM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	9449	1699	9424	-1699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATCACAAGCCTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	52338407	52309243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323
ENSMUSG00000029169.12_52311461_52341835_1	chr5	-	1537	11	ISM	ENSMUSG00000029169.12	ENSMUST00000199321.5	2550	12	5996	393	5996	-393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCGTCGAAGTACTGATT	NA	NA	NA	NA	NA	NA	NA	NA	52341835	52311460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809
ENSMUSG00000029169.12_52311518_52341890_1	chr5	-	1535	11	ISM	ENSMUSG00000029169.12	ENSMUST00000199321.5	2550	12	5941	450	5941	-450	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCTGCAGACAATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	52341890	52311517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809
ENSMUSG00000029169.12_52314847_52341991_1	chr5	-	1534	10	ISM	ENSMUSG00000029169.12	ENSMUST00000199321.5	2550	12	5840	3779	5840	-3779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGAGATCATCTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	52341991	52314846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809
ENSMUSG00000029169.12_52314875_52342071_1	chr5	-	1586	10	ISM	ENSMUSG00000029169.12	ENSMUST00000199321.5	2550	12	5760	3807	5760	-3807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGGCCAAGATGAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	52342071	52314874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809
ENSMUSG00000029169.12_52317674_52342177_1	chr5	-	1545	9	ISM	ENSMUSG00000029169.12	ENSMUST00000199321.5	2550	12	5654	6606	5654	-6606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGAGTTCCCTTTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	52342177	52317673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809
ENSMUSG00000029169.12_52317720_52342235_1	chr5	-	1557	9	ISM	ENSMUSG00000029169.12	ENSMUST00000199321.5	2550	12	5596	6652	5596	-6652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTTTAAATGATGATGG	NA	NA	NA	NA	NA	NA	NA	NA	52342235	52317719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809
ENSMUSG00000029169.12_52318235_52347720_1	chr5	-	1622	9	ISM	ENSMUSG00000029169.12	ENSMUST00000199321.5	2550	12	111	7167	111	-7167	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGACTGACAACAGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	52347720	52318234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ENSMUSG00000029169.12_52318928_52347836_1	chr5	-	1630	8	ISM	ENSMUSG00000029169.12	ENSMUST00000199321.5	2550	12	-5	7860	-5	-7860	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAGTAATGCTATACCA	NA	NA	NA	NA	NA	NA	NA	NA	52347836	52318927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ENSMUSG00000029171.13_64250293_64285191_1	chr5	+	1866	14	FSM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	0	503	0	-503	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAACCTACAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	64250292	64285191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ENSMUSG00000029171.13_64250396_64285250_1	chr5	+	1822	14	FSM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	103	444	103	-444	multi-exon	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCTCCAATAAACTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	64250395	64285250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ENSMUSG00000029171.13_64254424_64285373_1	chr5	+	1807	13	ISM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	4131	321	4131	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTATTATTTTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	64254423	64285373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ENSMUSG00000029171.13_64258287_64285507_1	chr5	+	1878	12	ISM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	7994	187	7994	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGTAAACAATATGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	64258286	64285507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ENSMUSG00000029171.13_64260259_64285694_1	chr5	+	1893	11	ISM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	9966	0	9966	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATAAGGTTTATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	64260258	64285694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ENSMUSG00000029175.18_30805356_30813010_1	chr5	+	332	3	ISM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	79	4063	71	-2578	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAGTAACCTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	30805355	30813010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_30805443_30812091_30812165_30812838
ENSMUSG00000029175.18_30812959_30814147_1	chr5	+	322	3	ISM	ENSMUSG00000029175.18	ENSMUST00000196740.5	1972	7	7674	1441	7674	-1441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTTTGTCTACAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	30812958	30814147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_30813011_30813231_30813445_30814090
ENSMUSG00000029176.14_52991354_53021996_1	chr5	+	2329	26	ISM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	0	3143	0	-3143	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCCTTAGGAGATTGG	NA	NA	NA	NA	NA	NA	NA	NA	52991353	53021996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820
ENSMUSG00000029176.14_52991468_53023359_1	chr5	+	2337	27	ISM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	114	1780	114	-1780	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTACAGACCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	52991467	53023359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235
ENSMUSG00000029176.14_52991577_53023789_1	chr5	+	2281	28	FSM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	223	1350	223	-1350	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGAGATTGACGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	52991576	53023789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ENSMUSG00000029176.14_52991639_53023838_1	chr5	+	2268	28	FSM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	285	1301	285	-1301	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTGAAGATCAAGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	52991638	53023838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ENSMUSG00000029176.14_52991701_53023894_1	chr5	+	2262	28	FSM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	347	1245	347	-1245	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGCTGCCCTAGACCCGG	NA	NA	NA	NA	NA	NA	NA	NA	52991700	53023894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ENSMUSG00000029176.14_52993018_53024076_1	chr5	+	2412	27	ISM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	1664	1063	1664	-1063	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCATACTCTGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	52993017	53024076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ENSMUSG00000029176.14_52999056_53024210_1	chr5	+	2307	25	ISM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	7702	929	7702	-929	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGCCATTCCTGTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	52999055	53024210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ENSMUSG00000029176.14_53003998_53024629_1	chr5	+	2279	19	ISM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	12644	510	12644	-510	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGATGTCCAGTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	53003997	53024629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ENSMUSG00000029176.14_53004032_53024702_1	chr5	+	2318	19	ISM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	12678	437	12678	-437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCACTAGGAGATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	53004031	53024702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ENSMUSG00000029176.14_53007885_53024958_1	chr5	+	2275	15	ISM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	16531	181	16531	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTCCAGGAACGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	53007884	53024958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ENSMUSG00000029176.14_53013184_53025139_1	chr5	+	2334	12	ISM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	21830	0	21830	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGCGTGTTTTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	53013183	53025139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ENSMUSG00000029177.10_30824121_30832174_1	chr5	+	1461	5	NNC	ENSMUSG00000029177.10	novel	1466	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGTAAAGTTACTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	30824120	30832174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_30824458_30829807_30829915_30830330_30830404_30830636_30830788_30831381
ENSMUSG00000029178.15_64960731_64984510_1	chr5	+	1193	5	ISM	ENSMUSG00000029178.15	ENSMUST00000165536.8	5221	6	0	5734	0	-1939	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACCCAAAGGAAGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	64960730	64984510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452
ENSMUSG00000029178.15_64960920_64986449_1	chr5	+	1237	6	FSM	ENSMUSG00000029178.15	ENSMUST00000165536.8	5221	6	189	3795	189	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCGCTCTGACCACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	64960919	64986449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ENSMUSG00000029178.15_64979691_64987080_1	chr5	+	1083	4	ISM	ENSMUSG00000029178.15	ENSMUST00000166409.6	1562	6	10009	-255	5578	255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTCCTTTGTCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	64979690	64987080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_64979701_64980221_64980373_64984452_64984614_64986319
ENSMUSG00000029178.15_64980244_64987251_1	chr5	+	1222	3	ISM	ENSMUSG00000029178.15	ENSMUST00000166409.6	1562	6	10562	-426	6131	426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACCATCAACATCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	64980243	64987251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_64980373_64984452_64984614_64986319
ENSMUSG00000029185.15_65127414_65185844_1	chr5	+	1246	9	ISM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	0	13385	0	-13385	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGAACCAACCCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	65127413	65185844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65127488_65137050_65137407_65153157_65153246_65163140_65163255_65163376_65163487_65166330_65166466_65172658_65172812_65178944_65179069_65185752
ENSMUSG00000029185.15_65137216_65188624_1	chr5	+	1196	10	ISM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	9802	10605	9802	-10605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGAAGTCACTGCACG	NA	NA	NA	NA	NA	NA	NA	NA	65137215	65188624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65137407_65153157_65153246_65163140_65163255_65163376_65163487_65166330_65166466_65172658_65172812_65178944_65179069_65185752_65185845_65187407_65187570_65188597
ENSMUSG00000029185.15_65137343_65191744_1	chr5	+	1212	11	ISM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	9929	7485	9929	-7485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTTATCGAAGAAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	65137342	65191744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65137407_65153157_65153246_65163140_65163255_65163376_65163487_65166330_65166466_65172658_65172812_65178944_65179069_65185752_65185845_65187407_65187570_65188597_65188738_65191714
ENSMUSG00000029185.15_65153157_65196084_1	chr5	+	1246	11	ISM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	25743	3145	25743	-3145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAGCCCCCAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	65153156	65196084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65153246_65163140_65163255_65163376_65163487_65166330_65166466_65172658_65172812_65178944_65179069_65185752_65185845_65187407_65187570_65188597_65188738_65191714_65191788_65196030
ENSMUSG00000029185.15_65163181_65198042_1	chr5	+	1193	11	ISM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	35767	1187	35767	-1187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTGTTTGAAAGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	65163180	65198042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65163255_65163376_65163487_65166330_65166466_65172658_65172812_65178944_65179069_65185752_65185845_65187407_65187570_65188597_65188738_65191714_65191788_65196030_65196085_65197966
ENSMUSG00000029185.15_65163231_65198095_1	chr5	+	1196	11	ISM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	35817	1134	35817	-1134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATCTCTTCACTACATA	NA	NA	NA	NA	NA	NA	NA	NA	65163230	65198095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65163255_65163376_65163487_65166330_65166466_65172658_65172812_65178944_65179069_65185752_65185845_65187407_65187570_65188597_65188738_65191714_65191788_65196030_65196085_65197966
ENSMUSG00000029185.15_65163452_65198210_1	chr5	+	1212	10	ISM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	36038	1019	36038	-1019	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTCTTAATGTATACTG	NA	NA	NA	NA	NA	NA	NA	NA	65163451	65198210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65163487_65166330_65166466_65172658_65172812_65178944_65179069_65185752_65185845_65187407_65187570_65188597_65188738_65191714_65191788_65196030_65196085_65197966
ENSMUSG00000029185.15_65178943_65198509_1	chr5	+	1190	7	ISM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	51529	720	51529	-720	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGGGACATAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	65178942	65198509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65179069_65185752_65185845_65187407_65187570_65188597_65188738_65191714_65191788_65196030_65196085_65197966
ENSMUSG00000029185.15_65185762_65198679_1	chr5	+	1225	6	ISM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	58348	550	58348	-550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAGCTGAGAATCATTT	NA	NA	NA	NA	NA	NA	NA	NA	65185761	65198679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65185845_65187407_65187570_65188597_65188738_65191714_65191788_65196030_65196085_65197966
ENSMUSG00000029185.15_65187500_65198822_1	chr5	+	1193	5	ISM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	60086	407	60086	-407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCTGATCCAGGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	65187499	65198822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65187570_65188597_65188738_65191714_65191788_65196030_65196085_65197966
ENSMUSG00000029185.15_65188687_65198979_1	chr5	+	1191	4	ISM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	61273	250	61273	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCCCAGTGGCTTATC	NA	NA	NA	NA	NA	NA	NA	NA	65188686	65198979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65188738_65191714_65191788_65196030_65196085_65197966
ENSMUSG00000029185.15_65191762_65199129_1	chr5	+	1243	3	ISM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	64348	100	64348	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTTTGTTTTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	65191761	65199129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65191788_65196030_65196085_65197966
ENSMUSG00000029186.13_52898916_52908061_1	chr5	+	644	3	ISM	ENSMUSG00000029186.13	ENSMUST00000031081.11	3139	10	0	18621	0	-18621	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTTCCTAACCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	52898915	52908061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52899311_52905710_52905848_52907949
ENSMUSG00000029186.13_52898948_52908110_1	chr5	+	661	3	ISM	ENSMUSG00000029186.13	ENSMUST00000031081.11	3139	10	32	18572	-4	-18572	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTCAAACTTAATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	52898947	52908110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52899311_52905710_52905848_52907949
ENSMUSG00000029186.13_52899050_52908855_1	chr5	+	691	4	ISM	ENSMUSG00000029186.13	ENSMUST00000031081.11	3139	10	134	17827	98	-17827	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGGCAGAAAGTTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	52899049	52908855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52899311_52905710_52905848_52907949_52908151_52908763
ENSMUSG00000029186.13_52899180_52910453_1	chr5	+	617	5	ISM	ENSMUSG00000029186.13	ENSMUST00000031081.11	3139	10	264	16229	228	-16229	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTGTGAAAGATTACAAG	NA	NA	NA	NA	NA	NA	NA	NA	52899179	52910453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52899311_52905710_52905848_52907949_52908151_52908763_52908896_52910437
ENSMUSG00000029186.13_52899230_52910508_1	chr5	+	622	5	ISM	ENSMUSG00000029186.13	ENSMUST00000031081.11	3139	10	314	16174	278	-16174	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTGCCCGAGAACATTA	NA	NA	NA	NA	NA	NA	NA	NA	52899229	52910508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52899311_52905710_52905848_52907949_52908151_52908763_52908896_52910437
ENSMUSG00000029186.13_52899256_52910583_1	chr5	+	671	5	ISM	ENSMUSG00000029186.13	ENSMUST00000031081.11	3139	10	340	16099	304	-16099	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACAGGTACGGGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	52899255	52910583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52899311_52905710_52905848_52907949_52908151_52908763_52908896_52910437
ENSMUSG00000029186.13_52905761_52912029_1	chr5	+	625	5	ISM	ENSMUSG00000029186.13	ENSMUST00000031081.11	3139	10	6845	14653	6809	-14653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATTGAAAGTGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	52905760	52912029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52905848_52907949_52908151_52908763_52908896_52910437_52910592_52911978
ENSMUSG00000029186.13_52908008_52918247_1	chr5	+	629	6	ISM	ENSMUSG00000029186.13	ENSMUST00000031082.8	3034	10	9056	8435	9056	-8435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTCCTTTTTCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	52908007	52918247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215
ENSMUSG00000029186.13_52908057_52918303_1	chr5	+	636	6	ISM	ENSMUSG00000029186.13	ENSMUST00000031082.8	3034	10	9105	8379	9105	-8379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTGTACAAGACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	52908056	52918303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215
ENSMUSG00000029186.13_52908121_52918349_1	chr5	+	618	6	ISM	ENSMUSG00000029186.13	ENSMUST00000031082.8	3034	10	9169	8333	9169	-8333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACATTTCATTTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	52908120	52918349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215
ENSMUSG00000029186.13_52908833_52924993_1	chr5	+	648	7	ISM	ENSMUSG00000029186.13	ENSMUST00000031082.8	3034	10	9881	1689	9881	-1689	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGTGGAGTGCAGCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	52908832	52924993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
ENSMUSG00000029186.13_52910492_52925145_1	chr5	+	683	6	ISM	ENSMUSG00000029186.13	ENSMUST00000031082.8	3034	10	11540	1537	11540	-1537	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTGATGTAAATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	52910491	52925145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
ENSMUSG00000029186.13_52914230_52925305_1	chr5	+	653	4	ISM	ENSMUSG00000029186.13	ENSMUST00000031082.8	3034	10	15278	1377	15278	-1377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTGTATTTTTATAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	52914229	52925305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52914308_52918215_52918350_52919773_52919834_52924924
ENSMUSG00000029186.13_52914279_52925366_1	chr5	+	665	4	ISM	ENSMUSG00000029186.13	ENSMUST00000031082.8	3034	10	15327	1316	15327	-1316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTACACATGCTAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	52914278	52925366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_52914308_52918215_52918350_52919773_52919834_52924924
ENSMUSG00000029189.11_53264958_53274406_1	chr5	-	761	4	ISM	ENSMUSG00000029189.11	ENST00000502949.5	3382	23	83408	-275	83408	275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAAAAGCCCAGCTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	53274406	53264957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53265517_53273504_53273578_53273663_53273767_53274380
ENSMUSG00000029189.11_53265016_53274459_1	chr5	-	756	4	ISM	ENSMUSG00000029189.11	ENST00000502949.5	3382	23	83355	-217	83355	217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCCAAGGCTGACTGAC	NA	NA	NA	NA	NA	NA	NA	NA	53274459	53265015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53265517_53273504_53273578_53273663_53273767_53274380
ENSMUSG00000029189.11_53265233_53293242_1	chr5	-	1086	9	ISM	ENSMUSG00000029189.11	ENST00000502949.5	3382	23	64572	0	64572	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTAAACAAGAACATAGG	NA	NA	NA	NA	NA	NA	NA	NA	53293242	53265232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53265517_53273504_53273578_53273663_53273767_53274380_53274509_53279091_53279202_53280508_53280594_53280727_53280819_53289135_53289220_53293114
ENSMUSG00000029189.11_53265343_53295185_1	chr5	-	1034	10	ISM	ENSMUSG00000029189.11	ENST00000502949.5	3382	23	62629	110	62629	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTTAGCAGCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	53295185	53265342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53265517_53273504_53273578_53273663_53273767_53274380_53274509_53279091_53279202_53280508_53280594_53280727_53280819_53289135_53289220_53293114_53293243_53295127
ENSMUSG00000029189.11_53265398_53295256_1	chr5	-	1050	10	ISM	ENSMUSG00000029189.11	ENST00000502949.5	3382	23	62558	165	62558	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGAGCCTCGTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	53295256	53265397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53265517_53273504_53273578_53273663_53273767_53274380_53274509_53279091_53279202_53280508_53280594_53280727_53280819_53289135_53289220_53293114_53293243_53295127
ENSMUSG00000029189.11_53273664_53301524_1	chr5	-	1110	10	ISM	ENSMUSG00000029189.11	ENST00000502949.5	3382	23	56290	8431	56290	-8431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATCCTGCCCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	53301524	53273663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53273767_53274380_53274509_53279091_53279202_53280508_53280594_53280727_53280819_53289135_53289220_53293114_53293243_53295127_53295305_53297149_53297213_53301383
ENSMUSG00000029189.11_53274427_53302860_1	chr5	-	1045	10	ISM	ENSMUSG00000029189.11	ENST00000502949.5	3382	23	54954	9194	54954	-9194	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCCATTCCAGTAACACC	NA	NA	NA	NA	NA	NA	NA	NA	53302860	53274426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53274509_53279091_53279202_53280508_53280594_53280727_53280819_53289135_53289220_53293114_53293243_53295127_53295305_53297149_53297213_53301383_53301525_53302776
ENSMUSG00000029189.11_53280509_53311680_1	chr5	-	1057	9	ISM	ENSMUSG00000029189.11	ENST00000502949.5	3382	23	46134	15276	46134	-15276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGTATAGAAAAACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	53311680	53280508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53280594_53280727_53280819_53289135_53289220_53293114_53293243_53295127_53295305_53297149_53297213_53301383_53301525_53302776_53302897_53311512
ENSMUSG00000029189.11_53280769_53312979_1	chr5	-	1028	9	ISM	ENSMUSG00000029189.11	ENST00000502949.5	3382	23	44835	15536	44835	-15536	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCACAGACAAATTTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	53312979	53280768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53280819_53289135_53289220_53293114_53293243_53295127_53295305_53297149_53297213_53301383_53301525_53302776_53302897_53311512_53311693_53312894
ENSMUSG00000029189.11_53297149_53332211_1	chr5	-	1124	8	ISM	ENSMUSG00000029189.11	ENST00000502949.5	3382	23	25603	31916	25603	-31916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCCGTGCATATTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	53332211	53297148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53297213_53301383_53301525_53302776_53302897_53311512_53311693_53312894_53313107_53327698_53327840_53329915_53330049_53332078
ENSMUSG00000029189.11_53302874_53343338_1	chr5	-	1042	9	ISM	ENSMUSG00000029189.11	ENSMUST00000031090.8	4512	24	27456	38449	14476	-37641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGATGATGAAATACTCA	NA	NA	NA	NA	NA	NA	NA	NA	53343338	53302873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53302897_53311512_53311693_53312894_53313107_53327698_53327840_53329915_53330049_53332078_53332212_53339063_53339123_53342105_53342222_53343293
ENSMUSG00000029189.11_53311635_53345367_1	chr5	-	1044	9	ISM	ENSMUSG00000029189.11	ENSMUST00000031090.8	4512	24	25427	47210	12447	-46402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGTACAAACACTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	53345367	53311634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53311693_53312894_53313107_53327698_53327840_53329915_53330049_53332078_53332212_53339063_53339123_53342105_53342222_53343293_53343416_53345297
ENSMUSG00000029189.11_53312937_53357277_1	chr5	-	1036	9	ISM	ENSMUSG00000029189.11	ENSMUST00000031090.8	4512	24	13517	48512	537	-47704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTATGAAACTGGATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	53357277	53312936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53313107_53327698_53327840_53329915_53330049_53332078_53332212_53339063_53339123_53342105_53342222_53343293_53343416_53345297_53345425_53357242
ENSMUSG00000029189.11_53312937_53357330_1	chr5	-	1089	9	ISM	ENSMUSG00000029189.11	ENSMUST00000031090.8	4512	24	13464	48512	484	-47704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTATGAAACTGGATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	53357330	53312936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53313107_53327698_53327840_53329915_53330049_53332078_53332212_53339063_53339123_53342105_53342222_53343293_53343416_53345297_53345425_53357242
ENSMUSG00000029189.11_53312937_53357392_1	chr5	-	1151	9	ISM	ENSMUSG00000029189.11	ENSMUST00000031090.8	4512	24	13402	48512	422	-47704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTATGAAACTGGATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	53357392	53312936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53313107_53327698_53327840_53329915_53330049_53332078_53332212_53339063_53339123_53342105_53342222_53343293_53343416_53345297_53345425_53357242
ENSMUSG00000029189.11_53327746_53357503_1	chr5	-	1045	8	ISM	ENSMUSG00000029189.11	ENSMUST00000031090.8	4512	24	13291	63321	311	-62513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCCAGCTTGTTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	53357503	53327745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53327840_53329915_53330049_53332078_53332212_53339063_53339123_53342105_53342222_53343293_53343416_53345297_53345425_53357242
ENSMUSG00000029189.11_53327786_53357573_1	chr5	-	1075	8	ISM	ENSMUSG00000029189.11	ENSMUST00000031090.8	4512	24	13221	63361	241	-62553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGAGGCTTGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	53357573	53327785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53327840_53329915_53330049_53332078_53332212_53339063_53339123_53342105_53342222_53343293_53343416_53345297_53345425_53357242
ENSMUSG00000029189.11_53330001_53357679_1	chr5	-	1042	7	ISM	ENSMUSG00000029189.11	ENSMUST00000031090.8	4512	24	13115	65576	135	-64768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATGAGCGGTGTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	53357679	53330000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53330049_53332078_53332212_53339063_53339123_53342105_53342222_53343293_53343416_53345297_53345425_53357242
ENSMUSG00000029189.11_53332105_53357790_1	chr5	-	1079	6	ISM	ENSMUSG00000029189.11	ENSMUST00000031090.8	4512	24	13004	67680	24	-66872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCGCAGCCTACACCCG	NA	NA	NA	NA	NA	NA	NA	NA	53357790	53332104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53332212_53339063_53339123_53342105_53342222_53343293_53343416_53345297_53345425_53357242
ENSMUSG00000029189.11_53345346_53370657_1	chr5	-	836	3	ISM	ENSMUSG00000029189.11	ENST00000399878.8	4511	24	136	80921	136	-80113	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGAGAGCTAGAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	53370657	53345345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53345425_53357242_53357814_53370471
ENSMUSG00000029189.11_53345394_53370657_1	chr5	-	788	3	ISM	ENSMUSG00000029189.11	ENST00000399878.8	4511	24	136	80969	136	-80161	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCAGCGGAGAAAACACAG	NA	NA	NA	NA	NA	NA	NA	NA	53370657	53345393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53345425_53357242_53357814_53370471
ENSMUSG00000029189.11_53357335_53370794_1	chr5	-	802	2	ISM	ENSMUSG00000029189.11	ENSMUST00000031090.8	4512	24	0	92910	0	-92102	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAAGATCATCAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	53370794	53357334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_53357814_53370471
ENSMUSG00000029191.17_65419195_65434768_1	chr5	-	2614	11	ISM	ENSMUSG00000029191.17	ENSMUST00000203581.3	4689	25	58139	2	58139	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	65434768	65419194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699
ENSMUSG00000029191.17_65419346_65436082_1	chr5	-	2538	12	ISM	ENSMUSG00000029191.17	ENSMUST00000203581.3	4689	25	56825	153	56825	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAAGCTCTGTCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	65436082	65419345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053
ENSMUSG00000029191.17_65419412_65436135_1	chr5	-	2525	12	ISM	ENSMUSG00000029191.17	ENSMUST00000203581.3	4689	25	56772	219	56772	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGAAAGTGCTCAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	65436135	65419411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053
ENSMUSG00000029191.17_65419548_65436906_1	chr5	-	2524	13	ISM	ENSMUSG00000029191.17	ENSMUST00000203581.3	4689	25	56001	355	56001	-353	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCGGGAGATGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	65436906	65419547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799
ENSMUSG00000029191.17_65419608_65436975_1	chr5	-	2533	13	ISM	ENSMUSG00000029191.17	ENSMUST00000203581.3	4689	25	55932	415	55932	337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGCCATCAGGTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	65436975	65419607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799
ENSMUSG00000029191.17_65419759_65437130_1	chr5	-	2537	13	ISM	ENSMUSG00000029191.17	ENSMUST00000203581.3	4689	25	55777	566	55777	186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCAGTTCTGCAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	65437130	65419758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799
ENSMUSG00000029191.17_65419945_65445324_1	chr5	-	2575	15	ISM	ENSMUSG00000029191.17	ENSMUST00000203581.3	4689	25	47583	752	47583	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCACCTGGAGCCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	65445324	65419944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232
ENSMUSG00000029191.17_65420419_65451278_1	chr5	-	2575	17	ISM	ENSMUSG00000029191.17	ENSMUST00000203581.3	4689	25	41629	1226	41629	-474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAAGAAATGAAATCACT	NA	NA	NA	NA	NA	NA	NA	NA	65451278	65420418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000
ENSMUSG00000029191.17_65421589_65453387_1	chr5	-	2589	17	ISM	ENSMUSG00000029191.17	ENSMUST00000203581.3	4689	25	39520	2396	39520	-1644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTAGTGCACTCAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	65453387	65421588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296
ENSMUSG00000029191.17_65423575_65460412_1	chr5	-	2526	19	ISM	ENSMUSG00000029191.17	ENSMUST00000203471.3	3952	25	32549	3630	32495	-3630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGAAGGGGCTCAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	65460412	65423574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318
ENSMUSG00000029191.17_65426389_65468419_1	chr5	-	2519	19	ISM	ENSMUSG00000029191.17	ENSMUST00000203471.3	3952	25	24542	6444	24488	-6444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTTTCCGAGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	65468419	65426388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383
ENSMUSG00000029191.17_65429795_65476830_1	chr5	-	2525	19	ISM	ENSMUSG00000029191.17	ENSMUST00000203471.3	3952	25	16131	9850	16077	-9850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCCATGACTATTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	65476830	65429794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747
ENSMUSG00000029191.17_65431293_65493013_1	chr5	-	2635	19	ISM	ENSMUSG00000029191.17	ENSMUST00000203471.3	3952	25	-52	11348	0	-11348	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGAGTTTCCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65493013	65431292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ENSMUSG00000029195.11_65505751_65529529_1	chr5	+	1060	2	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	94	11821	16	-11821	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTGAGGCAGAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	65505750	65529529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65506580_65529298
ENSMUSG00000029195.11_65505879_65529588_1	chr5	+	991	2	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	222	11762	144	-11762	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGCCCAACAACTTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	65505878	65529588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65506580_65529298
ENSMUSG00000029195.11_65505969_65529732_1	chr5	+	1045	2	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	312	11618	234	-11618	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCTATATAAAGACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	65505968	65529732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65506580_65529298
ENSMUSG00000029195.11_65506147_65533071_1	chr5	+	987	3	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	490	8279	412	-8279	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATGGCTTTGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	65506146	65533071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65506580_65529298_65529804_65533022
ENSMUSG00000029195.11_65506430_65536334_1	chr5	+	988	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	773	5016	695	-5016	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACAGATTGCTCTACCGA	NA	NA	NA	NA	NA	NA	NA	NA	65506429	65536334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65506580_65529298_65529804_65533022_65533292_65536270
ENSMUSG00000029195.11_65506520_65536427_1	chr5	+	991	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	863	4923	785	-4923	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGGCAAAAATGAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	65506519	65536427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65506580_65529298_65529804_65533022_65533292_65536270
ENSMUSG00000029195.11_65529598_65536871_1	chr5	+	1076	3	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23941	4479	23863	-4479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGTCGCTGTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	65529597	65536871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65529804_65533022_65533292_65536270
ENSMUSG00000029195.11_65533088_65537065_1	chr5	+	999	2	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	27431	4285	27353	-4285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCCTGCCGCGCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	65533087	65537065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65533292_65536270
ENSMUSG00000029195.11_65533159_65537128_1	chr5	+	991	2	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	27502	4222	27424	-4222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGAACCACTTCACTAC	NA	NA	NA	NA	NA	NA	NA	NA	65533158	65537128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65533292_65536270
ENSMUSG00000029195.11_65533219_65537190_1	chr5	+	993	2	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	27562	4160	27484	-4160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGACAGGGACGTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	65533218	65537190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65533292_65536270
ENSMUSG00000029195.11_65536609_65540849_1	chr5	+	1004	2	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	30952	501	30874	-501	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTGCACCATTTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	65536608	65540849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65537415_65540651
ENSMUSG00000029195.11_65536965_65541192_1	chr5	+	991	2	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	31308	158	31230	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCCGAGCTGAAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	65536964	65541192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65537415_65540651
ENSMUSG00000029195.11_65537033_65541243_1	chr5	+	974	2	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	31376	107	31298	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGCTTCAGGAAGTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	65537032	65541243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65537415_65540651
ENSMUSG00000029198.4_36622542_36628471_1	chr5	+	375	4	FSM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	200	2953	200	-2953	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGGAGATCAGCAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	36622541	36628471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_36622600_36626781_36626945_36627945_36628028_36628399
ENSMUSG00000029198.4_36626889_36628594_1	chr5	+	333	3	ISM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	4547	2830	4547	-2830	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGTTCGACCCTTACGAA	NA	NA	NA	NA	NA	NA	NA	NA	36626888	36628594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_36626945_36627945_36628028_36628399
ENSMUSG00000029199.12_65549596_65566182_2	chr5	+	972	9	NNC	ENSMUSG00000029199.12	novel	978	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGAGGATGGTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	65549595	65566182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_65549733_65551289_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65566077
ENSMUSG00000029199.12_65549596_65566182_3	chr5	+	973	9	NNC	ENSMUSG00000029199.12	novel	978	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGAGGATGGTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	65549595	65566182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559958_65560100_65561510_65561582_65566077
ENSMUSG00000029199.12_65549596_65566182_4	chr5	+	978	9	FSM	ENSMUSG00000029199.12	ENST00000340169.7	978	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGAGGATGGTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	65549595	65566182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65566077
ENSMUSG00000029199.12_65549673_65561529_1	chr5	+	435	5	ISM	ENSMUSG00000029199.12	ENST00000261434.8	781	7	77	4653	77	-4628	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTTTAACTCTAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	65549672	65561529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65549733_65552707_65552789_65557189_65557319_65559953_65560100_65561510
ENSMUSG00000029199.12_65552706_65561583_1	chr5	+	431	4	ISM	ENSMUSG00000029199.12	ENST00000261434.8	781	7	3110	4599	3110	-4574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTCTGAGTTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	65552705	65561583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65552789_65557189_65557319_65559953_65560100_65561510
ENSMUSG00000029199.12_65552706_65568036_1	chr5	+	2715	8	ISM	ENSMUSG00000029199.12	ENSMUST00000031101.10	2996	11	3823	0	3110	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATGGCTGTCCATATCA	NA	NA	NA	NA	NA	NA	NA	NA	65552705	65568036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ENSMUSG00000029199.12_65552757_65562687_1	chr5	+	393	5	ISM	ENSMUSG00000029199.12	ENST00000261434.8	781	7	3161	3495	3161	-3470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCCTGAGAAGTTCAAATA	NA	NA	NA	NA	NA	NA	NA	NA	65552756	65562687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65552789_65557189_65557319_65559953_65560100_65561510_65561582_65562672
ENSMUSG00000029199.12_65555173_65562703_1	chr5	+	436	5	ISM	ENSMUSG00000029199.12	ENSMUST00000122026.6	1668	11	6333	3847	5577	-3454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTGGGAAAAAGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	65555172	65562703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672
ENSMUSG00000029199.12_65557189_65566182_1	chr5	+	564	5	ISM	ENSMUSG00000029199.12	ENST00000261434.8	781	7	7593	0	7593	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGAGGATGGTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	65557188	65566182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ENSMUSG00000029201.15_65570996_65574377_1	chr5	-	536	3	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	18915	432	18915	-432	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTGCACTTTAATAATAC	NA	NA	NA	NA	NA	NA	NA	NA	65574377	65570995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65571407_65574167_65574279_65574363
ENSMUSG00000029201.15_65571054_65574428_1	chr5	-	529	3	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	18864	490	18864	-490	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTTTTTGTAAAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	65574428	65571053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65571407_65574167_65574279_65574363
ENSMUSG00000029201.15_65571126_65574455_1	chr5	-	484	3	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	18837	562	18837	-562	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTACATATTTTTATATT	NA	NA	NA	NA	NA	NA	NA	NA	65574455	65571125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65571407_65574167_65574279_65574363
ENSMUSG00000029201.15_65571274_65575951_1	chr5	-	601	5	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	17341	710	17341	-710	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTACTTCAGGGTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	65575951	65571273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820
ENSMUSG00000029201.15_65574233_65579995_1	chr5	-	516	6	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	13297	3669	13297	-3669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTGATGGTCGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	65579995	65574232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977
ENSMUSG00000029201.15_65574861_65580528_1	chr5	-	526	5	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	12764	4297	12764	-4297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGGTAGGGTTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	65580528	65574860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503
ENSMUSG00000029201.15_65574861_65580577_1	chr5	-	575	5	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	12715	4297	12715	-4297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGGTAGGGTTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	65580577	65574860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503
ENSMUSG00000029201.15_65574966_65580636_1	chr5	-	529	5	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	12656	4402	12656	-4402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAGTACCTGATGGACGA	NA	NA	NA	NA	NA	NA	NA	NA	65580636	65574965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503
ENSMUSG00000029201.15_65575918_65580825_1	chr5	-	508	5	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	12467	5354	12467	-5354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATCACGGATCATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	65580825	65575917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792
ENSMUSG00000029201.15_65580068_65581439_1	chr5	-	512	4	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	11853	9504	11853	-9504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGCAACAGGCGCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	65581439	65580067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65580126_65580503_65580702_65580792_65580994_65581384
ENSMUSG00000029201.15_65580571_65584832_1	chr5	-	508	4	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	8460	10007	8460	-10007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCACTGGGTTCCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	65584832	65580570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65580702_65580792_65580994_65581384_65581487_65584758
ENSMUSG00000029201.15_65580697_65584884_1	chr5	-	434	4	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	8408	10133	8408	-10133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAATCCTGAGTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	65584884	65580696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65580702_65580792_65580994_65581384_65581487_65584758
ENSMUSG00000029201.15_65580697_65584927_1	chr5	-	477	4	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	8365	10133	8365	-10133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAATCCTGAGTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	65584927	65580696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65580702_65580792_65580994_65581384_65581487_65584758
ENSMUSG00000029201.15_65580825_65593039_1	chr5	-	513	4	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	253	10261	253	-10261	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCCAACACAAAGCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	65593039	65580824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65580994_65581384_65581487_65584758_65584928_65592966
ENSMUSG00000029201.15_65580875_65593090_1	chr5	-	514	4	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	202	10311	202	-10311	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGCACAGTCCCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	65593090	65580874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65580994_65581384_65581487_65584758_65584928_65592966
ENSMUSG00000029201.15_65580926_65593147_1	chr5	-	520	4	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	145	10362	145	-10362	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTCGCCGCATTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	65593147	65580925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65580994_65581384_65581487_65584758_65584928_65592966
ENSMUSG00000029201.15_65581383_65593292_1	chr5	-	599	3	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	0	10819	0	-10819	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTAGTTTGCTTTGCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	65593292	65581382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65581487_65584758_65584928_65592966
ENSMUSG00000029204.8_66020923_66049944_1	chr5	+	535	2	FSM	ENSMUSG00000029204.8	ENST00000610353.4	977	2	71	371	71	-371	multi-exon	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACCAGCAGGCAGACGT	NA	NA	NA	NA	NA	NA	NA	NA	66020922	66049944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_66021185_66049671
ENSMUSG00000029204.8_66020961_66050079_1	chr5	+	632	2	FSM	ENSMUSG00000029204.8	ENST00000610353.4	977	2	109	236	109	-236	multi-exon	FALSE	canonical	NA	NA	NA	NA	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACGGACCAGAGAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	66020960	66050079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_66021185_66049671
ENSMUSG00000029204.8_66021093_66050191_1	chr5	+	612	2	FSM	ENSMUSG00000029204.8	ENST00000615577.4	651	2	-85	124	-85	-124	multi-exon	FALSE	canonical	NA	NA	NA	NA	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCAACCGGGGAGTACAG	NA	NA	NA	NA	NA	NA	NA	NA	66021092	66050191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_66021185_66049671
ENSMUSG00000029207.17_66458746_66522421_1	chr5	-	2123	8	ISM	ENSMUSG00000029207.17	ENSMUST00000159786.8	6333	16	253585	2563	253585	485	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAACATCTATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66522421	66458745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316
ENSMUSG00000029207.17_66459015_66549184_1	chr5	-	2027	10	ISM	ENSMUSG00000029207.17	ENSMUST00000159786.8	6333	16	226822	2832	226822	216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGAGCTAATATGCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	66549184	66459014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114
ENSMUSG00000029207.17_66459215_66557504_1	chr5	-	1993	12	NNC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	218502	16	intron_retention	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTCTTTTCAGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	66557504	66459214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468424_66469501_66469590_66470657_66470773_66520056_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418
ENSMUSG00000029207.17_66459704_66609218_1	chr5	-	2035	13	NNC	ENSMUSG00000029207.17	novel	3362	18	NA	NA	166788	-473	intron_retention	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGATTTTTTCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	66609218	66459703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468424_66469501_66469590_66470657_66470773_66520056_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557628_66608810
ENSMUSG00000029207.17_66464926_66609626_1	chr5	-	2046	12	NNC	ENSMUSG00000029207.17	novel	3362	18	NA	NA	166380	-5695	intron_retention	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCTAACGCAGCCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	66609626	66464925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_66465058_66466420_66466537_66468342_66468424_66469501_66469590_66470657_66470773_66520056_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557628_66608810
ENSMUSG00000029208.17_69714416_69729074_1	chr5	+	1948	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	112	1373	85	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGTGTTCTCTGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	69714415	69729074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ENSMUSG00000029208.17_69715875_69729350_1	chr5	+	1929	15	ISM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	1571	1097	1544	276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGGACCCTAGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	69715874	69729350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ENSMUSG00000029208.17_69716207_69729457_1	chr5	+	1960	14	ISM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	1903	990	1876	383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAACTCCTTACCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	69716206	69729457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ENSMUSG00000029208.17_69718997_69729074_1	chr5	+	1022	8	ISM	ENSMUSG00000029208.17	ENSMUST00000031113.13	1769	15	4666	0	4666	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGTGTTCTCTGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	69718996	69729074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_69719201_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ENSMUSG00000029208.17_69719029_69729767_1	chr5	+	1947	10	ISM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	4725	680	4698	-680	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTCCATTATTGTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	69719028	69729767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ENSMUSG00000029208.17_69719109_69729914_1	chr5	+	2014	10	ISM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	4805	533	4778	-533	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACAGTGCCATTCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	69719108	69729914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ENSMUSG00000029208.17_69722862_69730314_1	chr5	+	1969	7	ISM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	8558	133	8531	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATAATTTGATATTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	69722861	69730314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ENSMUSG00000029208.17_69723785_69730447_1	chr5	+	1977	6	ISM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	9481	0	9454	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGATACTGGATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	69723784	69730447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ENSMUSG00000029209.16_69732344_69736938_1	chr5	-	1216	3	ISM	ENSMUSG00000029209.16	ENSMUST00000166298.8	1755	7	11233	-169	11233	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTATCTCATTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	69736938	69732343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_69733297_69735320_69735496_69736850
ENSMUSG00000029209.16_69732513_69742401_1	chr5	-	1229	4	ISM	ENSMUSG00000029209.16	ENSMUST00000031117.13	1894	7	7282	169	5770	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGATTATTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	69742401	69732512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_69733297_69735320_69735496_69736850_69737036_69742316
ENSMUSG00000029209.16_69732513_69742462_1	chr5	-	1290	4	ISM	ENSMUSG00000029209.16	ENSMUST00000031117.13	1894	7	7221	169	5709	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGATTATTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	69742462	69732512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_69733297_69735320_69735496_69736850_69737036_69742316
ENSMUSG00000029209.16_69732748_69747027_1	chr5	-	1218	6	ISM	ENSMUSG00000029209.16	ENSMUST00000031117.13	1894	7	2656	404	1144	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCCTGCTATTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	69747027	69732747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_69733297_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003
ENSMUSG00000029209.16_69732913_69749597_1	chr5	-	1239	7	FSM	ENSMUSG00000029209.16	ENSMUST00000031117.13	1894	7	86	569	20	242	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCATAATCTCTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	69749597	69732912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_69733297_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003_69747167_69749550
ENSMUSG00000029209.16_69732988_69749632_1	chr5	-	1199	7	FSM	ENSMUSG00000029209.16	ENSMUST00000031117.13	1894	7	51	644	4	167	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATATAGCTACCTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	69749632	69732987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_69733297_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003_69747167_69749550
ENSMUSG00000029209.16_69733045_69749683_1	chr5	-	1193	7	FSM	ENSMUSG00000029209.16	ENSMUST00000031117.13	1894	7	0	701	0	110	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGGTTCTAGAAGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	69749683	69733044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_69733297_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003_69747167_69749550
ENSMUSG00000029213.12_72315564_72322712_1	chr5	-	2001	4	ISM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	2820	1646	2820	-1646	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAAATTAAATCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	72322712	72315563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693
ENSMUSG00000029213.12_72315620_72322763_1	chr5	-	1996	4	ISM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	2769	1702	2769	-1702	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGACACCGTGTTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	72322763	72315619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693
ENSMUSG00000029213.12_72315819_72325532_1	chr5	-	1994	5	FSM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	0	1901	0	-1901	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGACCAACAGATACTCA	NA	NA	NA	NA	NA	NA	NA	NA	72325532	72315818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325421
ENSMUSG00000029221.16_67464308_67510084_1	chr5	+	1765	17	ISM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	10	5702	10	-5699	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGACTTGAGAAAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	67464307	67510084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994
ENSMUSG00000029221.16_67464527_67511956_1	chr5	+	1652	18	FSM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	229	3830	229	-3827	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACTGAATGGGTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	67464526	67511956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ENSMUSG00000029221.16_67473043_67512063_1	chr5	+	1723	17	ISM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	8745	3723	8745	-3720	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTAATCATGTCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	67473042	67512063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ENSMUSG00000029221.16_67484227_67512263_1	chr5	+	1686	15	ISM	ENSMUSG00000029221.16	ENSMUST00000113676.6	5648	17	19929	3520	19929	-3520	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCGCACTGCGTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	67484226	67512263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ENSMUSG00000029221.16_67491921_67512662_1	chr5	+	1701	10	ISM	ENSMUSG00000029221.16	ENSMUST00000113676.6	5648	17	27623	3121	27623	-3121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACTTTACAGGCAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	67491920	67512662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ENSMUSG00000029221.16_67499477_67512854_1	chr5	+	1706	8	ISM	ENSMUSG00000029221.16	ENSMUST00000113676.6	5648	17	35179	2929	35179	-2929	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGACGAAAGCACAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	67499476	67512854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ENSMUSG00000029221.16_67503511_67513129_1	chr5	+	1731	5	ISM	ENSMUSG00000029221.16	ENSMUST00000113676.6	5648	17	39213	2654	39213	-2654	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACGGTAGTTTTCAATC	NA	NA	NA	NA	NA	NA	NA	NA	67503510	67513129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ENSMUSG00000029221.16_67507157_67513373_1	chr5	+	1711	3	ISM	ENSMUSG00000029221.16	ENSMUST00000113676.6	5648	17	42859	2410	42859	-2410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATTTGATCTCCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	67507156	67513373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_67507255_67509994_67510109_67511874
ENSMUSG00000029221.16_67510020_67513510_1	chr5	+	1725	2	ISM	ENSMUSG00000029221.16	ENSMUST00000113676.6	5648	17	45722	2273	45722	-2273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCATGGGTAACACCTA	NA	NA	NA	NA	NA	NA	NA	NA	67510019	67513510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_67510109_67511874
ENSMUSG00000029223.13_66833434_66844577_1	chr5	+	1165	8	NIC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTATTTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	66833433	66844577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_+_66833666_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ENSMUSG00000029223.13_66839784_66844577_1	chr5	+	654	5	ISM	ENSMUSG00000029223.13	ENST00000284440.9	976	8	6160	-8	6160	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTATTTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	66839783	66844577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ENSMUSG00000029227.16_74696164_74756591_1	chr5	+	1687	15	FSM	ENSMUSG00000029227.16	ENST00000306932.10	1865	15	-45	223	20	-215	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCAGCGAGCCGGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	74696163	74756591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_74696423_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ENSMUSG00000029227.16_74696164_74756860_1	chr5	+	2140	17	NNC	ENSMUSG00000029227.16	novel	2115	18	NA	NA	20	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCTAAGAAAGTAATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	74696163	74756860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_74696423_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733254_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ENSMUSG00000029227.16_74696164_74756860_2	chr5	+	2160	18	FSM	ENSMUSG00000029227.16	ENST00000358575.9	2115	18	-45	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCTAAGAAAGTAATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	74696163	74756860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_74696423_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ENSMUSG00000029227.16_74696345_74756806_1	chr5	+	1721	15	FSM	ENSMUSG00000029227.16	ENST00000306932.10	1865	15	136	8	136	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAAAAGCTTTGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	74696344	74756806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_74696423_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ENSMUSG00000029227.16_74707415_74752613_1	chr5	+	750	8	ISM	ENSMUSG00000029227.16	ENSMUST00000080164.12	4673	17	11305	6838	11206	-478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGCGCGACCACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	74707414	74752613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434
ENSMUSG00000029227.16_74717704_74755803_1	chr5	+	785	8	ISM	ENSMUSG00000029227.16	ENSMUST00000080164.12	4673	17	21594	3648	21495	-1003	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAGAGCGGCACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	74717703	74755803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734
ENSMUSG00000029227.16_74755775_74757150_1	chr5	+	749	2	ISM	ENSMUSG00000029227.16	ENST00000358575.9	2115	18	59566	-290	59566	268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTGTATATCTAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	74755774	74757150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_74755873_74756499
ENSMUSG00000029227.16_74755827_74757211_1	chr5	+	758	2	ISM	ENSMUSG00000029227.16	ENST00000358575.9	2115	18	59618	-351	59618	329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCTTCCTAGCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	74755826	74757211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_74755873_74756499
ENSMUSG00000029229.9_75167196_75187798_1	chr5	-	359	3	ISM	ENSMUSG00000029229.9	ENST00000512964.5	696	5	17161	77	17161	-77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCATACAGATGTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	75187798	75167195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_75167425_75171891_75171952_75187728
ENSMUSG00000029229.9_75167222_75187874_1	chr5	-	409	3	ISM	ENSMUSG00000029229.9	ENST00000512964.5	696	5	17085	103	17085	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATATTTGTCAAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	75187874	75167221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_75167425_75171891_75171952_75187728
ENSMUSG00000029233.16_76288153_76297676_1	chr5	+	499	4	ISM	ENSMUSG00000029233.16	ENSMUST00000031143.13	1747	6	35	5650	35	-4953	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTACGTCAGTGTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	76288152	76297676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599
ENSMUSG00000029233.16_76288315_76301406_1	chr5	+	494	5	ISM	ENSMUSG00000029233.16	ENSMUST00000031143.13	1747	6	197	1920	197	-1223	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTCCACATCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	76288314	76301406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599_76297798_76301370
ENSMUSG00000029233.16_76295562_76302630_1	chr5	+	708	4	FSM	ENSMUSG00000029233.16	ENST00000264228.9	732	4	25	-1	25	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGGCTTTATGGTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	76295561	76302630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_76295676_76297599_76297798_76301370_76301506_76302369
ENSMUSG00000029233.16_76295562_76302630_2	chr5	+	706	4	NNC	ENSMUSG00000029233.16	novel	732	4	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGGCTTTATGGTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	76295561	76302630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_76295676_76297599_76297798_76301370_76301506_76302371
ENSMUSG00000029233.16_76295562_76302630_3	chr5	+	700	4	NNC	ENSMUSG00000029233.16	novel	732	4	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGGCTTTATGGTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	76295561	76302630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_76295676_76297607_76297798_76301370_76301506_76302369
ENSMUSG00000029233.16_76295623_76302441_1	chr5	+	494	5	ISM	ENSMUSG00000029233.16	ENSMUST00000113507.8	1358	6	1139	650	86	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGAGCTGATGATCTAC	NA	NA	NA	NA	NA	NA	NA	NA	76295622	76302441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369
ENSMUSG00000029234.14_76332109_76356544_1	chr5	+	967	6	FSM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	382	548	382	-548	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACCCACTTAATTATTA	NA	NA	NA	NA	NA	NA	NA	NA	76332108	76356544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76352664_76355648_76355755_76356356
ENSMUSG00000029234.14_76347190_76356647_1	chr5	+	981	5	ISM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	15463	445	15463	-445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTTGACACCTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	76347189	76356647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_76347418_76351953_76352130_76352483_76352664_76355648_76355755_76356356
ENSMUSG00000029234.14_76351967_76356833_1	chr5	+	926	4	ISM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	20240	259	20240	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCCTGAGCCAGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	76351966	76356833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_76352130_76352483_76352664_76355648_76355755_76356356
ENSMUSG00000029234.14_76355647_76357092_1	chr5	+	844	2	ISM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	23920	0	23920	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTCCTCGTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	76355646	76357092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_76355755_76356356
ENSMUSG00000029246.15_77061123_77067305_1	chr5	-	2561	4	ISM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	32120	0	32120	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATGTGTGCATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	77067305	77061122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217
ENSMUSG00000029246.15_77061123_77067345_1	chr5	-	2601	4	ISM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	32080	0	32080	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATGTGTGCATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	77067345	77061122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217
ENSMUSG00000029246.15_77061258_77067647_1	chr5	-	2511	5	ISM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	31778	135	31778	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAGTACTATATGCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	77067647	77061257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602
ENSMUSG00000029246.15_77061365_77069366_1	chr5	-	2561	6	ISM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	30059	242	30059	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTATATGCTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	77069366	77061364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316
ENSMUSG00000029246.15_77061471_77070116_1	chr5	-	2537	7	ISM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	29309	348	29309	-348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTGACTTTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	77070116	77061470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057
ENSMUSG00000029246.15_77061585_77070330_1	chr5	-	2539	8	ISM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	29095	462	29095	-462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGTGGCAGTGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	77070330	77061584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301
ENSMUSG00000029246.15_77061744_77073577_1	chr5	-	2521	9	ISM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	25848	621	25848	-621	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATGTGTTACATAATGG	NA	NA	NA	NA	NA	NA	NA	NA	77073577	77061743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520
ENSMUSG00000029246.15_77061811_77073663_1	chr5	-	2540	9	ISM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	25762	688	25762	-688	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAACCCACTTAGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	77073663	77061810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520
ENSMUSG00000029246.15_77062045_77098896_1	chr5	-	2530	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	529	922	529	-922	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTTAAAGGCCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	77098896	77062044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ENSMUSG00000029246.15_77062299_77099156_1	chr5	-	2536	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	269	1176	269	-1176	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGGATGTACCAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	77099156	77062298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ENSMUSG00000029246.15_77062349_77099211_1	chr5	-	2541	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	214	1226	214	-1226	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTGATGGAGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	77099211	77062348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ENSMUSG00000029247.18_77099229_77115177_1	chr5	+	2132	10	FSM	ENSMUSG00000029247.18	ENSMUST00000120912.8	2345	10	34	179	14	17	multi-exon	FALSE	canonical	NA	NA	NA	NA	2467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTTCCTCATGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	77099228	77115177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_77099516_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ENSMUSG00000029247.18_77099382_77115356_1	chr5	+	2158	10	FSM	ENSMUSG00000029247.18	ENSMUST00000120912.8	2345	10	187	0	167	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGCTGTGTGGTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	77099381	77115356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_77099516_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ENSMUSG00000029247.18_77099445_77115356_1	chr5	+	2095	10	FSM	ENSMUSG00000029247.18	ENSMUST00000120912.8	2345	10	250	0	230	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGCTGTGTGGTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	77099444	77115356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_77099516_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ENSMUSG00000029247.18_77104439_77108987_1	chr5	+	362	3	ISM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	5224	6173	5224	-6173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGCAACTCATTGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	77104438	77108987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77104591_77107161_77107341_77108956
ENSMUSG00000029247.18_77104493_77109038_1	chr5	+	359	3	ISM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	5278	6122	5278	-6122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTGAAGTGGACATCATG	NA	NA	NA	NA	NA	NA	NA	NA	77104492	77109038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77104591_77107161_77107341_77108956
ENSMUSG00000029247.18_77104526_77109106_1	chr5	+	394	3	ISM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	5311	6054	5311	-6054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGGACTGTACGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	77104525	77109106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77104591_77107161_77107341_77108956
ENSMUSG00000029247.18_77109024_77112365_1	chr5	+	388	4	ISM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	9809	2795	9809	-2795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGAAGGCTTGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	77109023	77112365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77109137_77109239_77109354_77110273_77110358_77112288
ENSMUSG00000029247.18_77109090_77112402_1	chr5	+	359	4	ISM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	9875	2758	9875	-2758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTAGAGTAACATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	77109089	77112402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77109137_77109239_77109354_77110273_77110358_77112288
ENSMUSG00000029247.18_77109323_77114142_1	chr5	+	345	4	ISM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	10108	1018	10108	-1018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGGCCCAGTGCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	77109322	77114142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77109354_77110273_77110358_77112288_77112470_77114093
ENSMUSG00000029247.18_77112310_77114533_1	chr5	+	358	3	ISM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	13095	627	13095	-627	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTGCTGCTCAGATA	NA	NA	NA	NA	NA	NA	NA	NA	77112309	77114533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77112470_77114093_77114253_77114494
ENSMUSG00000029247.18_77112359_77114586_1	chr5	+	362	3	ISM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	13144	574	13144	-574	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCGAGCGAGCATATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	77112358	77114586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77112470_77114093_77114253_77114494
ENSMUSG00000029250.6_77458338_77471456_1	chr5	+	761	6	ISM	ENSMUSG00000029250.6	ENST00000431623.6	3645	24	-5	25715	-5	-25562	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGAAGTTCCTATCATCA	NA	NA	NA	NA	NA	NA	NA	NA	77458337	77471456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77458478_77460997_77461071_77467810_77467924_77468057_77468278_77468801_77468961_77471400
ENSMUSG00000029250.6_77458338_77484360_1	chr5	+	2362	16	ISM	ENSMUSG00000029250.6	ENSMUST00000031167.6	4145	25	344	12811	-5	-12658	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	1243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTTCTCTACTATCC	NA	NA	NA	NA	NA	NA	NA	NA	77458337	77484360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273
ENSMUSG00000029250.6_77458459_77471512_1	chr5	+	696	6	ISM	ENSMUSG00000029250.6	ENST00000431623.6	3645	24	116	25659	116	-25506	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTAGAACACATCATT	NA	NA	NA	NA	NA	NA	NA	NA	77458458	77471512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77458478_77460997_77461071_77467810_77467924_77468057_77468278_77468801_77468961_77471400
ENSMUSG00000029250.6_77460997_77471565_1	chr5	+	882	6	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	2654	25453	2654	-25453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGGAGAAAGCAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	77460996	77471565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400
ENSMUSG00000029250.6_77463756_77473671_1	chr5	+	835	6	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	5413	23347	5413	-23347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTTACTAAGGAGAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	77463755	77473671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585
ENSMUSG00000029250.6_77467854_77490471_1	chr5	+	2324	16	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	9511	6547	9511	-6547	internal_fragment	TRUE	canonical	NA	NA	NA	NA	1232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACCTTACCCGAGAACGA	NA	NA	NA	NA	NA	NA	NA	NA	77467853	77490471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376
ENSMUSG00000029250.6_77467872_77473937_1	chr5	+	836	6	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	9529	23081	9529	-23081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTAGACGACAGAGATCA	NA	NA	NA	NA	NA	NA	NA	NA	77467871	77473937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894
ENSMUSG00000029250.6_77468132_77474424_1	chr5	+	830	6	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	9789	22594	9789	-22594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTATTGATCGCGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	77468131	77474424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381
ENSMUSG00000029250.6_77468192_77474469_1	chr5	+	815	6	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	9849	22549	9849	-22549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACAAGGATCATATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	77468191	77474469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381
ENSMUSG00000029250.6_77468206_77490783_1	chr5	+	2338	16	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	9863	6235	9863	-6235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAGACAAGAGGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	77468205	77490783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707
ENSMUSG00000029250.6_77468800_77491124_1	chr5	+	2390	16	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	10457	5894	10457	-5894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATTTTGTCTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	77468799	77491124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016
ENSMUSG00000029250.6_77468859_77479043_1	chr5	+	835	6	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	10516	17975	10516	-17975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGATGGCAAGCTAGCG	NA	NA	NA	NA	NA	NA	NA	NA	77468858	77479043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979
ENSMUSG00000029250.6_77468904_77492698_1	chr5	+	2346	17	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	10561	4320	10561	-4320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1085	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGATTTCTAATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	77468903	77492698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638
ENSMUSG00000029250.6_77471501_77493173_1	chr5	+	2319	17	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	13158	3845	13158	-3845	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATATGGTGGATGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	77471500	77493173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097
ENSMUSG00000029250.6_77473585_77480145_1	chr5	+	901	6	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	15242	16873	15242	-16873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAATTTCCTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	77473584	77480145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033
ENSMUSG00000029250.6_77473737_77496138_1	chr5	+	2257	17	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	15394	880	15394	-880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1088	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAAGACTGTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	77473736	77496138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069
ENSMUSG00000029250.6_77473894_77497018_1	chr5	+	2431	17	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	15551	0	15551	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1432	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGAAGTTCATGGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	77473893	77497018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ENSMUSG00000029250.6_77474381_77483679_1	chr5	+	938	6	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	16038	13339	16038	-13339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTCGTACTTCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	77474380	77483679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480
ENSMUSG00000029250.6_77478974_77484442_1	chr5	+	925	6	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	20631	12576	20631	-12576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACGTTCGGTGTGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	77478973	77484442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273
ENSMUSG00000029250.6_77479866_77488276_1	chr5	+	858	7	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	21523	8742	21523	-8742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGTGTTTGAGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	77479865	77488276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221
ENSMUSG00000029250.6_77483577_77491116_1	chr5	+	905	7	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	25234	5902	25234	-5902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGAAGGTAAGATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	77483576	77491116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016
ENSMUSG00000029250.6_77484272_77492752_1	chr5	+	926	7	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	25929	4266	25929	-4266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATTTACTATAACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	77484271	77492752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638
ENSMUSG00000029250.6_77488215_77496142_1	chr5	+	899	7	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	29872	876	29872	-876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGACTGTTTGAAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	77488214	77496142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069
ENSMUSG00000029250.6_77490376_77496265_1	chr5	+	921	6	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	32033	753	32033	-753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGCACTTGATTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	77490375	77496265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069
ENSMUSG00000029250.6_77490510_77497018_1	chr5	+	879	7	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	32167	0	32167	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGAAGTTCATGGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	77490509	77497018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ENSMUSG00000029250.6_77490565_77496967_1	chr5	+	773	7	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	32222	51	32222	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGCTCATGTCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	77490564	77496967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ENSMUSG00000029250.6_77491058_77497171_1	chr5	+	783	5	ISM	ENSMUSG00000029250.6	ENST00000431623.6	3645	24	32715	0	32715	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTTATCTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	77491057	77497171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ENSMUSG00000029250.6_77491108_77497171_1	chr5	+	733	5	ISM	ENSMUSG00000029250.6	ENST00000431623.6	3645	24	32765	0	32765	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTTATCTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	77491107	77497171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ENSMUSG00000029260.16_87039095_87054796_1	chr5	-	1267	4	NNC	ENSMUSG00000029260.16	novel	1201	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTAAAGCTGGAAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	87054796	87039094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_87039341_87049012_87049138_87052115_87052265_87054049
ENSMUSG00000029260.16_87039095_87054796_2	chr5	-	1274	4	FSM	ENSMUSG00000029260.16	ENST00000511240.1	1201	4	-73	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTAAAGCTGGAAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	87054796	87039094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_87039341_87049012_87049145_87052115_87052265_87054049
ENSMUSG00000029260.16_87039095_87054796_3	chr5	-	1362	5	FSM	ENSMUSG00000029260.16	ENST00000508661.5	1289	5	-73	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTAAAGCTGGAAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	87054796	87039094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_87039341_87041591_87041680_87049012_87049145_87052115_87052265_87054049
ENSMUSG00000029265.5_108416964_108426481_1	chr5	+	857	4	FSM	ENSMUSG00000029265.5	ENST00000370267.1	1404	4	4	543	4	-543	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTCAAGCAGGATCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	108416963	108426481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_108417049_108417164_108417676_108423434_108423599_108426384
ENSMUSG00000029265.5_108417397_108426796_1	chr5	+	855	3	FSM	ENSMUSG00000029265.5	ENSMUST00000031190.5	3085	3	634	1596	437	-228	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGTTTATAAAATACAGT	NA	NA	NA	NA	NA	NA	NA	NA	108417396	108426796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_108417676_108423434_108423599_108426384
ENSMUSG00000029265.5_108417636_108427027_1	chr5	+	847	3	FSM	ENSMUSG00000029265.5	ENSMUST00000031190.5	3085	3	873	1365	676	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTTGTTTAGAGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	108417635	108427027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_108417676_108423434_108423599_108426384
ENSMUSG00000029265.5_108417636_108427027_2	chr5	+	842	3	NNC	ENSMUSG00000029265.5	novel	3085	3	NA	NA	676	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTTGTTTAGAGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	108417635	108427027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_108417676_108423434_108423599_108426389
ENSMUSG00000029267.18_108213740_108254866_1	chr5	+	1928	15	NNC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	130	-85	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAAAAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	108213739	108254866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_108213832_108228690_108228894_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108235845_108255490_1	chr5	+	1940	10	ISM	ENSMUSG00000029267.18	ENSMUST00000081567.11	4060	15	22237	1380	22235	539	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTTGGAGTATATATCC	NA	NA	NA	NA	NA	NA	NA	NA	108235844	108255490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108242009_108255749_1	chr5	+	1905	7	ISM	ENSMUSG00000029267.18	ENSMUST00000081567.11	4060	15	28401	1121	28399	798	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTTTTCAAGTGATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	108242008	108255749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108248804_108256136_1	chr5	+	1993	5	ISM	ENSMUSG00000029267.18	ENSMUST00000081567.11	4060	15	35196	734	35194	-734	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTAGCTCTTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	108248803	108256136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029270.11_108057325_108062236_1	chr5	-	783	2	ISM	ENSMUSG00000029270.11	ENST00000616709.4	1656	4	72724	509	72715	-509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAACCTAAAAACGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	108062236	108057324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_108058083_108062211
ENSMUSG00000029270.11_108057401_108062281_1	chr5	-	752	2	ISM	ENSMUSG00000029270.11	ENST00000616709.4	1656	4	72679	585	72670	-585	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAAACAGCTTTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	108062281	108057400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_108058083_108062211
ENSMUSG00000029270.11_108057569_108134899_1	chr5	-	842	4	FSM	ENSMUSG00000029270.11	ENST00000616709.4	1656	4	61	753	52	-753	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAGTCTGACCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	108134899	108057568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_108058083_108062211_108062320_108072450_108072586_108134814
ENSMUSG00000029270.11_108057669_108059592_1	chr5	-	529	2	ISM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	75359	1750	75359	-853	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCCAAAAACCTAGGATATAA	NA	NA	NA	NA	NA	NA	NA	NA	108059592	108057668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_108058083_108059477
ENSMUSG00000029270.11_108057955_108072537_1	chr5	-	500	4	ISM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	62414	2036	62414	-1139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTCTCCTGATGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	108072537	108057954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450
ENSMUSG00000029273.11_87703799_87713970_2	chr5	-	802	7	NNC	ENSMUSG00000029273.11	novel	865	7	NA	NA	55	-2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGAGAGTTGGTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	87713970	87703798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_87703909_87704712_87704894_87706346_87706442_87707619_87707747_87711739_87711827_87712568_87712695_87713894
ENSMUSG00000029273.11_87703799_87713970_3	chr5	-	808	7	FSM	ENSMUSG00000029273.11	ENST00000458020.1	865	7	55	2	55	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGAGAGTTGGTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	87713970	87703798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_87703909_87704712_87704894_87706346_87706442_87707619_87707747_87711733_87711827_87712568_87712695_87713894
ENSMUSG00000029276.14_107696888_107706386_1	chr5	-	591	6	ISM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	39119	55	39057	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCATTATACTTTATAC	NA	NA	NA	NA	NA	NA	NA	NA	107706386	107696887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327
ENSMUSG00000029276.14_107705787_107718099_1	chr5	-	584	8	ISM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	27406	8954	27344	-8898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGAGGTGACCACCACT	NA	NA	NA	NA	NA	NA	NA	NA	107718099	107705786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995
ENSMUSG00000029276.14_107721713_107745505_1	chr5	-	599	6	ISM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	0	24880	0	-24824	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTGTTCCACACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	107745505	107721712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
ENSMUSG00000029287.15_107257271_107278428_1	chr5	-	603	3	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	84517	232	84517	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCAGCCCCTCGCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	107278428	107257270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107257624_107266284_107266433_107278326
ENSMUSG00000029287.15_107257411_107280678_1	chr5	-	559	4	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	82267	372	82267	-372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGATCTGGGTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	107280678	107257410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107257624_107266284_107266433_107278326_107278445_107280598
ENSMUSG00000029287.15_107257475_107280789_1	chr5	-	606	4	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	82156	436	82156	-436	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACGGATGCCTGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	107280789	107257474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107257624_107266284_107266433_107278326_107278445_107280598
ENSMUSG00000029287.15_107257557_107280823_1	chr5	-	558	4	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	82122	518	82122	-518	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATAGGGAGCACTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	107280823	107257556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107257624_107266284_107266433_107278326_107278445_107280598
ENSMUSG00000029287.15_107266284_107284800_1	chr5	-	580	4	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	78145	9245	78145	-9245	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGACTACTCACTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	107284800	107266283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107266433_107278326_107278445_107280598_107280896_107284784
ENSMUSG00000029287.15_107266338_107284857_1	chr5	-	583	4	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	78088	9299	78088	-9299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATCGGAGCACTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	107284857	107266337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107266433_107278326_107278445_107280598_107280896_107284784
ENSMUSG00000029287.15_107278400_107285459_1	chr5	-	565	4	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	77486	21361	77486	-21361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGGACCATGATGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	107285459	107278399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107278445_107280598_107280896_107284784_107284944_107285395
ENSMUSG00000029287.15_107280665_107287667_1	chr5	-	564	4	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	75278	23626	75278	-23626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCTTCCTGCACTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	107287667	107280664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107280896_107284784_107284944_107285395_107285537_107287634
ENSMUSG00000029287.15_107280846_107288303_1	chr5	-	557	5	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	74642	23807	74642	-23807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATCTCTCCATACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	107288303	107280845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107280896_107284784_107284944_107285395_107285537_107287634_107287788_107288249
ENSMUSG00000029287.15_107285396_107288578_1	chr5	-	623	3	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	74367	28357	74367	-28357	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTTAGTCTCCCGTA	NA	NA	NA	NA	NA	NA	NA	NA	107288578	107285395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107285537_107287634_107287788_107288249
ENSMUSG00000029287.15_107285510_107290270_1	chr5	-	557	4	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	72675	28471	72675	-28471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCAGTGGCTGGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	107290270	107285509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107285537_107287634_107287788_107288249_107288579_107290222
ENSMUSG00000029287.15_107287731_107290395_1	chr5	-	559	3	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	72550	30692	72550	-30692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATGGTACCCACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	107290395	107287730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107287788_107288249_107288579_107290222
ENSMUSG00000029287.15_107288302_107295997_1	chr5	-	573	3	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	66948	31263	66948	-31263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATGTGACAATGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	107295997	107288301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107288579_107290222_107290413_107295891
ENSMUSG00000029287.15_107288426_107297709_1	chr5	-	545	4	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	65236	31387	65236	-31387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGAAGGAGGGAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	107297709	107288425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107288579_107290222_107290413_107295891_107296040_107297655
ENSMUSG00000029287.15_107288487_107297782_1	chr5	-	557	4	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	65163	31448	65163	-31448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCAAGGGGAAATCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	107297782	107288486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107288579_107290222_107290413_107295891_107296040_107297655
ENSMUSG00000029287.15_107290284_107302229_1	chr5	-	558	4	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	60716	33245	60716	-33245	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACGTCATACACCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	107302229	107290283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107290413_107295891_107296040_107297655_107297825_107302117
ENSMUSG00000029287.15_107290395_107325711_1	chr5	-	560	5	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	37234	33356	37234	-33356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGGAAAAGAGAGTGAACG	NA	NA	NA	NA	NA	NA	NA	NA	107325711	107290394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107290413_107295891_107296040_107297655_107297825_107302117_107302302_107325670
ENSMUSG00000029287.15_107296003_107362800_1	chr5	-	570	5	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	145	38964	145	-38964	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCGAGAGGATCCTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	107362800	107296002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107296040_107297655_107297825_107302117_107302302_107325670_107325809_107362758
ENSMUSG00000029287.15_107297766_107362919_1	chr5	-	542	4	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	26	40727	26	-40727	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGAGTACCTTCAACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	107362919	107297765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_107297825_107302117_107302302_107325670_107325809_107362758
ENSMUSG00000029288.12_88603870_88613599_1	chr5	+	821	10	ISM	ENSMUSG00000029288.12	ENST00000449493.2	1487	11	-22	2389	0	-2389	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGCCTGTGAGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	88603869	88613599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_88603966_88604743_88604813_88607217_88607284_88608561_88608610_88609491_88609603_88611130_88611326_88612272_88612369_88612989_88613050_88613148_88613194_88613564
ENSMUSG00000029288.12_88604796_88615372_1	chr5	+	745	10	ISM	ENSMUSG00000029288.12	ENST00000449493.2	1487	11	904	616	904	-616	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCTTAGGAGACTGAATC	NA	NA	NA	NA	NA	NA	NA	NA	88604795	88615372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_88604813_88607217_88607284_88608561_88608610_88609491_88609603_88611130_88611326_88612272_88612369_88612989_88613050_88613148_88613194_88613564_88613610_88615310
ENSMUSG00000029288.12_88609578_88615563_1	chr5	+	719	7	ISM	ENSMUSG00000029288.12	ENST00000449493.2	1487	11	5686	425	5686	-425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTTGCTTTCCCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	88609577	88615563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_88609603_88611130_88611326_88612272_88612369_88612989_88613050_88613148_88613194_88613564_88613610_88615310
ENSMUSG00000029288.12_88611128_88615687_1	chr5	+	821	6	ISM	ENSMUSG00000029288.12	ENST00000449493.2	1487	11	7236	301	7236	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACCTATGGTGCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	88611127	88615687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_88611326_88612272_88612369_88612989_88613050_88613148_88613194_88613564_88613610_88615310
ENSMUSG00000029288.12_88611263_88615687_1	chr5	+	686	6	ISM	ENSMUSG00000029288.12	ENST00000449493.2	1487	11	7371	301	7371	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACCTATGGTGCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	88611262	88615687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_88611326_88612272_88612369_88612989_88613050_88613148_88613194_88613564_88613610_88615310
ENSMUSG00000029288.12_88612271_88615885_1	chr5	+	823	5	ISM	ENSMUSG00000029288.12	ENST00000449493.2	1487	11	8379	103	8379	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTCCCCATAGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	88612270	88615885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_88612369_88612989_88613050_88613148_88613194_88613564_88613610_88615310
ENSMUSG00000029290.13_106024442_106063157_1	chr5	+	2132	12	FSM	ENSMUSG00000029290.13	ENSMUST00000031227.11	2667	12	8	527	8	-527	multi-exon	TRUE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCCCGTTGTAATCATT	NA	NA	NA	NA	NA	NA	NA	NA	106024441	106063157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_106024565_106026614_106026660_106034052_106034089_106034182_106034295_106036299_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
ENSMUSG00000029290.13_106034052_106063770_1	chr5	+	2311	10	FSM	ENSMUSG00000029290.13	ENST00000370447.3	2311	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCAAAGATTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	106034051	106063770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_106034089_106034182_106034295_106036566_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
ENSMUSG00000029290.13_106034269_106063427_1	chr5	+	2112	9	ISM	ENSMUSG00000029290.13	ENSMUST00000031227.11	2667	12	9835	257	217	-257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATGAGTATTTAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	106034268	106063427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_106034295_106036299_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
ENSMUSG00000029291.12_88746310_88769188_1	chr5	+	462	5	ISM	ENSMUSG00000029291.12	ENST00000502653.5	1747	17	18	28655	18	-19598	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGAAGAAGGAGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	88746309	88769188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_88746349_88762799_88762974_88764320_88764439_88765193_88765296_88769159
ENSMUSG00000029291.12_88762920_88775899_1	chr5	+	476	6	ISM	ENSMUSG00000029291.12	ENST00000502653.5	1747	17	16628	21944	16628	-12887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGATCCTAGACCAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	88762919	88775899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883
ENSMUSG00000029291.12_88769253_88785103_1	chr5	+	459	7	ISM	ENSMUSG00000029291.12	ENST00000502653.5	1747	17	22961	12740	22961	-3683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTATGAAGATGCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	88769252	88785103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050
ENSMUSG00000029291.12_88778396_88786937_1	chr5	+	513	5	ISM	ENSMUSG00000029291.12	ENST00000502653.5	1747	17	32104	10906	32104	-1849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAACGCTGTTTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	88778395	88786937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839
ENSMUSG00000029291.12_88785189_88796177_1	chr5	+	500	6	ISM	ENSMUSG00000029291.12	ENST00000502653.5	1747	17	38897	1666	38897	-1666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGGTGAGTGGTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	88785188	88796177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793488_88796114
ENSMUSG00000029291.12_88786906_88797748_1	chr5	+	468	6	ISM	ENSMUSG00000029291.12	ENST00000502653.5	1747	17	40614	95	40614	-95	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCCGTCAAGCATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	88786905	88797748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_88786938_88790787_88790908_88791926_88792024_88793395_88793488_88796114_88796184_88797690
ENSMUSG00000029304.15_104582987_104588270_1	chr5	+	813	7	FSM	ENSMUSG00000029304.15	ENSMUST00000112748.8	1456	7	0	643	0	-639	multi-exon	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGAGCATTCCAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	104582986	104588270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_104583115_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUSG00000029304.15_104583005_104588721_1	chr5	+	1194	7	FSM	ENSMUSG00000029304.15	ENSMUST00000031243.15	1410	7	21	195	18	-188	multi-exon	FALSE	canonical	NA	NA	NA	NA	14097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGCATTTTAATGATTG	NA	NA	NA	NA	NA	NA	NA	NA	104583004	104588721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUSG00000029304.15_104583005_104588721_2	chr5	+	1186	6	NNC	ENSMUSG00000029304.15	novel	1410	7	NA	NA	18	-188	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGCATTTTAATGATTG	NA	NA	NA	NA	NA	NA	NA	NA	104583004	104588721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_104583063_104584240_104584337_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUSG00000029304.15_104583005_104588721_3	chr5	+	1191	7	NNC	ENSMUSG00000029304.15	novel	1410	7	NA	NA	18	-188	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGCATTTTAATGATTG	NA	NA	NA	NA	NA	NA	NA	NA	104583004	104588721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_104583063_104584240_104584313_104584413_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUSG00000029304.15_104583024_104588305_1	chr5	+	811	7	FSM	ENSMUSG00000029304.15	ENSMUST00000112748.8	1456	7	37	608	37	-604	multi-exon	FALSE	canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTCGGATGTGATCGAT	NA	NA	NA	NA	NA	NA	NA	NA	104583023	104588305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_104583115_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUSG00000029304.15_104583024_104588369_1	chr5	+	875	7	FSM	ENSMUSG00000029304.15	ENSMUST00000112748.8	1456	7	37	544	37	-540	multi-exon	FALSE	canonical	NA	NA	NA	NA	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCACAGCCACAAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	104583023	104588369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_104583115_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUSG00000029304.15_104584239_104588721_1	chr5	+	1129	5	NNC	ENSMUSG00000029304.15	novel	1507	6	NA	NA	181	-188	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGCATTTTAATGATTG	NA	NA	NA	NA	NA	NA	NA	NA	104584238	104588721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_104584336_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUSG00000029304.15_104584239_104588913_1	chr5	+	1330	6	FSM	ENSMUSG00000029304.15	ENSMUST00000112747.2	1507	6	181	-4	181	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	48936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGTCTGGTGGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	104584238	104588913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUSG00000029304.15_104585519_104588913_1	chr5	+	1203	3	NNC	ENSMUSG00000029304.15	novel	1456	7	NA	NA	1461	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	11596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGTCTGGTGGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	104585518	104588913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_104585602_104587111_104587413_104588094
ENSMUSG00000029304.15_104587131_104588916_1	chr5	+	1102	2	NNC	ENSMUSG00000029304.15	novel	1410	7	NA	NA	3073	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	7150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTGGTGGTGTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	104587130	104588916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_104587413_104588096
ENSMUSG00000029310.14_104194834_104212848_1	chr5	+	992	8	FSM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	99	397	99	-397	multi-exon	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGAAGTGGGTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	104194833	104212848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_104195013_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ENSMUSG00000029310.14_104194834_104212882_1	chr5	+	1026	8	FSM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	99	363	99	-363	multi-exon	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTACGCCAGTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	104194833	104212882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_104195013_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ENSMUSG00000029310.14_104194834_104212891_1	chr5	+	1035	8	FSM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	99	354	99	-354	multi-exon	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCACTCTCAGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	104194833	104212891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_104195013_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ENSMUSG00000029310.14_104194972_104212947_1	chr5	+	953	8	FSM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	237	298	237	-298	multi-exon	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGGACCACGCCGCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	104194971	104212947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_104195013_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ENSMUSG00000029310.14_104198537_104213073_1	chr5	+	940	7	NNC	ENSMUSG00000029310.14	novel	1488	8	NA	NA	3802	-172	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGTGAAATGCCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	104198536	104213073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212807
ENSMUSG00000029310.14_104198600_104213143_1	chr5	+	947	7	NNC	ENSMUSG00000029310.14	novel	1488	8	NA	NA	3865	-102	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTTTGTATAGATTTA	NA	NA	NA	NA	NA	NA	NA	NA	104198599	104213143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212807
ENSMUSG00000029310.14_104202135_104213245_1	chr5	+	973	6	ISM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	7400	0	7400	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTTCAAGTTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	104202134	104213245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ENSMUSG00000029319.9_100802589_100822150_1	chr5	-	1735	7	NNC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	NA	NA	NA	NA	NA	NA	NA	NA	100822150	100802588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811560_100815757_100815925_100821854
ENSMUSG00000029319.9_100802589_100822150_2	chr5	-	1737	7	NNC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	NA	NA	NA	NA	NA	NA	NA	NA	100822150	100802588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_100803338_100805683_100805867_100808037_100808172_100809702_100809789_100811445_100811568_100815757_100815925_100821854
ENSMUSG00000029319.9_100802589_100822150_3	chr5	-	1738	7	NNC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	NA	NA	NA	NA	NA	NA	NA	NA	100822150	100802588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809784_100811445_100811568_100815757_100815925_100821854
ENSMUSG00000029326.14_100188087_100208901_1	chr5	+	217	3	ISM	ENSMUSG00000029326.14	ENST00000509635.5	1547	6	41	7663	41	-7663	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATCCAGGCTGTGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	100188086	100208901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_100188133_100206998_100207101_100208832
ENSMUSG00000029326.14_100188089_100215745_1	chr5	+	491	5	FSM	ENSMUSG00000029326.14	ENST00000505846.5	1353	5	43	819	43	-819	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAACCTCATCACGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	100188088	100215745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_100188133_100206998_100207101_100210001_100210135_100211617_100211742_100215657
ENSMUSG00000029326.14_100206997_100215963_1	chr5	+	861	5	ISM	ENSMUSG00000029326.14	ENST00000509635.5	1547	6	18951	601	18951	-601	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCAAATTCATGTAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	100206996	100215963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ENSMUSG00000029326.14_100207026_100216039_1	chr5	+	908	5	ISM	ENSMUSG00000029326.14	ENST00000509635.5	1547	6	18980	525	18980	-525	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAATACTAATCAAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	100207025	100216039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ENSMUSG00000029326.14_100208831_100210052_1	chr5	+	247	2	ISM	ENSMUSG00000029326.14	ENST00000509635.5	1547	6	20785	6512	20785	-6512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTATACATCTATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	100208830	100210052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_100209027_100210001
ENSMUSG00000029326.14_100208936_100216222_1	chr5	+	913	4	ISM	ENSMUSG00000029326.14	ENST00000509635.5	1547	6	20890	342	20890	-342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCCCAGCGTCCACAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	100208935	100216222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_100209027_100210001_100210135_100211617_100211742_100215657
ENSMUSG00000029326.14_100208963_100211665_1	chr5	+	245	3	ISM	ENSMUSG00000029326.14	ENST00000509635.5	1547	6	20917	4899	20917	-4899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTTACCGGAAGATTGC	NA	NA	NA	NA	NA	NA	NA	NA	100208962	100211665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_100209027_100210001_100210135_100211617
ENSMUSG00000029328.16_100181436_100187081_1	chr5	-	2747	8	NNC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	100187081	100181435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_100182844_100183962_100184055_100184339_100184506_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ENSMUSG00000029328.16_100181436_100187081_2	chr5	-	2743	8	NNC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	100187081	100181435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185680_100185841_100186578
ENSMUSG00000029328.16_100181436_100187081_3	chr5	-	2747	8	NNC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	100187081	100181435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_100182844_100183962_100184050_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ENSMUSG00000029328.16_100182580_100185554_1	chr5	-	731	5	ISM	ENSMUSG00000029328.16	ENST00000614627.4	1838	7	1816	112	1527	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	100185554	100182579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100182844_100183962_100184055_100184720_100184836_100184943_100185076_100185426
ENSMUSG00000029328.16_100185697_100187207_1	chr5	-	773	2	ISM	ENSMUSG00000029328.16	ENST00000614627.4	1838	7	163	3229	-126	-3229	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGATGCTGCTAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	100187207	100185696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100185841_100186578
ENSMUSG00000029328.16_100185766_100187275_1	chr5	-	772	2	ISM	ENSMUSG00000029328.16	ENST00000614627.4	1838	7	95	3298	95	-3298	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGTAGACTGCACAATTA	NA	NA	NA	NA	NA	NA	NA	NA	100187275	100185765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100185841_100186578
ENSMUSG00000029334.15_99079579_99091575_1	chr5	-	740	5	FSM	ENSMUSG00000029334.15	ENSMUST00000162619.8	1308	5	116	452	116	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTGGCATAGGATAGT	NA	NA	NA	NA	NA	NA	NA	NA	99091575	99079578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_99079965_99082187_99082255_99090012_99090076_99091272_99091344_99091422
ENSMUSG00000029334.15_99079761_99091343_1	chr5	-	405	4	FSM	ENSMUSG00000029334.15	ENSMUST00000162147.6	1389	4	350	634	348	-182	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAGACAATTACAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	99091343	99079760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_99079965_99082187_99082255_99090012_99090076_99091272
ENSMUSG00000029334.15_99079858_99091442_1	chr5	-	407	4	FSM	ENSMUSG00000029334.15	ENSMUST00000162147.6	1389	4	251	731	249	-279	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAACCCGCCGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	99091442	99079857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_99079965_99082187_99082255_99090012_99090076_99091272
ENSMUSG00000029338.14_98033063_98085989_1	chr5	-	1462	2	ISM	ENSMUSG00000029338.14	ENST00000680913.1	3363	17	92461	477	91526	-477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTCAGATAATCTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	98085989	98033062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_98034460_98085924
ENSMUSG00000029338.14_98033225_98086292_1	chr5	-	1368	3	ISM	ENSMUSG00000029338.14	ENST00000680913.1	3363	17	92158	639	91223	-639	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTATAAATTAAAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	98086292	98033224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_98034460_98085924_98086027_98086261
ENSMUSG00000029338.14_98033252_98086368_1	chr5	-	1417	3	ISM	ENSMUSG00000029338.14	ENST00000680913.1	3363	17	92082	666	91147	-666	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGGAAAGAGACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	98086368	98033251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_98034460_98085924_98086027_98086261
ENSMUSG00000029338.14_98033375_98096124_1	chr5	-	1373	4	ISM	ENSMUSG00000029338.14	ENST00000680913.1	3363	17	82326	789	81391	-789	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGCAAGCAGCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	98096124	98033374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_98034460_98085924_98086027_98086261_98086427_98096103
ENSMUSG00000029338.14_98033519_98108483_1	chr5	-	1358	6	ISM	ENSMUSG00000029338.14	ENST00000680913.1	3363	17	69967	933	69032	-933	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTTTTAATTTAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	98108483	98033518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_98034460_98085924_98086027_98086261_98086427_98096103_98096197_98097028_98097071_98108468
ENSMUSG00000029338.14_98033750_98125479_1	chr5	-	1377	9	ISM	ENSMUSG00000029338.14	ENST00000680913.1	3363	17	52971	1164	52036	-1164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCCTTTAGTTTTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	98125479	98033749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_98034460_98085924_98086027_98086261_98086427_98096103_98096197_98097028_98097071_98108468_98108565_98113540_98113620_98123179_98123250_98125459
ENSMUSG00000029338.14_98034073_98152152_1	chr5	-	1373	13	ISM	ENSMUSG00000029338.14	ENST00000680913.1	3363	17	26298	1487	25363	-1487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGCTAGGACTGCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	98152152	98034072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_98034460_98085924_98086027_98086261_98086427_98096103_98096197_98097028_98097071_98108468_98108565_98113540_98113620_98123179_98123250_98125459_98125559_98127832_98127894_98151085_98151167_98151914_98151984_98152123
ENSMUSG00000029338.14_98034418_98178292_1	chr5	-	1373	17	FSM	ENSMUSG00000029338.14	ENST00000680913.1	3363	17	158	1832	119	-1832	multi-exon	FALSE	canonical	NA	NA	NA	NA	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAGAACAAAGAATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	98178292	98034417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_98034460_98085924_98086027_98086261_98086427_98096103_98096197_98097028_98097071_98108468_98108565_98113540_98113620_98123179_98123250_98125459_98125559_98127832_98127894_98151085_98151167_98151914_98151984_98152123_98152232_98152717_98152800_98175325_98175402_98177442_98177515_98178256
ENSMUSG00000029338.14_98085923_98178279_1	chr5	-	1319	16	ISM	ENSMUSG00000029338.14	ENSMUST00000199088.2	2739	18	623	22691	132	17	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGGGCAGGGCATGTA	NA	NA	NA	NA	NA	NA	NA	NA	98178279	98085922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_98086027_98086261_98086427_98096103_98096200_98097028_98097071_98108468_98108565_98113540_98113620_98123179_98123250_98125459_98125559_98127832_98127894_98151085_98151167_98151914_98151984_98152123_98152232_98152717_98152800_98175329_98175402_98177442_98177515_98178256
ENSMUSG00000029338.14_98085940_98151985_1	chr5	-	638	7	NIC	ENSMUSG00000029338.14	novel	1165	12	NA	NA	25530	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTTGAGAAAGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	98151985	98085939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_-_98086027_98086261_98086427_98096103_98096200_98097028_98097071_98108468_98108565_98151085_98151167_98151914
ENSMUSG00000029338.14_98085962_98178347_1	chr5	-	1348	16	ISM	ENSMUSG00000029338.14	ENSMUST00000199088.2	2739	18	555	22730	64	-17	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAAGGTGATGAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	98178347	98085961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_98086027_98086261_98086427_98096103_98096200_98097028_98097071_98108468_98108565_98113540_98113620_98123179_98123250_98125459_98125559_98127832_98127894_98151085_98151167_98151914_98151984_98152123_98152232_98152717_98152800_98175329_98175402_98177442_98177515_98178256
ENSMUSG00000029338.14_98086261_98152231_1	chr5	-	658	7	NIC	ENSMUSG00000029338.14	novel	5656	17	NA	NA	25284	-316	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTCTGTGTTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	98152231	98086260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_-_98086427_98096103_98096200_98097028_98097071_98108468_98108565_98151085_98151167_98151914_98151984_98152123
ENSMUSG00000029338.14_98086367_98152780_1	chr5	-	615	8	NIC	ENSMUSG00000029338.14	novel	5656	17	NA	NA	24735	-422	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTGATGGTCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	98152780	98086366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_-_98086427_98096103_98096200_98097028_98097071_98108468_98108565_98151085_98151167_98151914_98151984_98152123_98152232_98152717
ENSMUSG00000029338.14_98096102_98175403_1	chr5	-	654	8	NIC	ENSMUSG00000029338.14	novel	1165	12	NA	NA	2112	-10157	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTCTCTTAAAGGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	98175403	98096101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_-_98096200_98097028_98097071_98108468_98108565_98151085_98151167_98151914_98151984_98152123_98152232_98152717_98152800_98175325
ENSMUSG00000029338.14_98097029_98177514_1	chr5	-	626	8	ISM	ENSMUSG00000029338.14	ENST00000346652.10	1165	12	936	11089	1	-11084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCGAATGCCTGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	98177514	98097028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_98097071_98108468_98108565_98151085_98151167_98151914_98151984_98152123_98152232_98152717_98152800_98175325_98175402_98177442
ENSMUSG00000029338.14_98108534_98178329_1	chr5	-	592	8	ISM	ENSMUSG00000029338.14	ENST00000346652.10	1165	12	121	22594	82	-22589	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTTGCTGCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	98178329	98108533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_98108565_98151085_98151167_98151914_98151984_98152123_98152232_98152717_98152800_98175325_98175402_98177442_98177515_98178256
ENSMUSG00000029344.16_112424557_112462823_1	chr5	+	1431	7	FSM	ENSMUSG00000029344.16	ENSMUST00000031287.12	1835	7	0	404	0	-398	multi-exon	FALSE	canonical	NA	NA	NA	NA	2089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTCTCAGTCACGCCG	NA	NA	NA	NA	NA	NA	NA	NA	112424556	112462823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_112424638_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ENSMUSG00000029344.16_112455505_112463051_1	chr5	+	1433	5	ISM	ENSMUSG00000029344.16	ENSMUST00000071455.7	1741	6	30932	170	-168	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGACAAGACCGGAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	112455504	112463051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ENSMUSG00000029344.16_112455564_112463095_1	chr5	+	1418	5	ISM	ENSMUSG00000029344.16	ENSMUST00000071455.7	1741	6	30991	126	-109	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCAAAGGATCTATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	112455563	112463095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ENSMUSG00000029344.16_112455704_112463222_1	chr5	+	1405	5	ISM	ENSMUSG00000029344.16	ENSMUST00000071455.7	1741	6	31131	-1	31	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	112455703	112463222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ENSMUSG00000029344.16_112455973_112459602_1	chr5	+	617	3	FSM	ENSMUSG00000029344.16	ENST00000564073.1	917	3	300	0	300	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAGTCAAAGTGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	112455972	112459602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_112456344_112457554_112457758_112459559
ENSMUSG00000029344.16_112455973_112463222_1	chr5	+	1136	5	ISM	ENSMUSG00000029344.16	ENSMUST00000071455.7	1741	6	31400	-1	300	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	112455972	112463222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ENSMUSG00000029344.16_112456157_112463222_1	chr5	+	952	5	ISM	ENSMUSG00000029344.16	ENSMUST00000071455.7	1741	6	31584	-1	484	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	112456156	112463222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ENSMUSG00000029345.14_112474224_112479084_1	chr5	+	962	6	ISM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	0	6855	0	-6855	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGATGACCTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	112474223	112479084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956
ENSMUSG00000029345.14_112475479_112480878_1	chr5	+	920	7	ISM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	1255	5061	1255	-5061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAGCCACAAGCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	112475478	112480878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829
ENSMUSG00000029345.14_112475886_112481007_1	chr5	+	933	6	ISM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	1662	4932	1662	-4932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGAGCGCACGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	112475885	112481007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829
ENSMUSG00000029345.14_112475961_112481075_1	chr5	+	926	6	ISM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	1737	4864	1737	-4864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCCTGTCACACGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	112475960	112481075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829
ENSMUSG00000029345.14_112477247_112481210_1	chr5	+	958	5	ISM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	3023	4729	3023	-4729	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGGATGAGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	112477246	112481210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829
ENSMUSG00000029345.14_112477328_112481252_1	chr5	+	919	5	ISM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	3104	4687	3104	-4687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGTATTATGAGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	112477327	112481252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829
ENSMUSG00000029345.14_112481008_112483504_1	chr5	+	936	5	ISM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	6784	2435	6784	-2435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGGGAGGGGATGATC	NA	NA	NA	NA	NA	NA	NA	NA	112481007	112483504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438
ENSMUSG00000029345.14_112481316_112484918_1	chr5	+	938	7	ISM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	7092	1021	7092	-1021	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTACGAGGCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	112481315	112484918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
ENSMUSG00000029345.14_112482739_112485299_1	chr5	+	988	4	ISM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	8515	640	8515	-640	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGACTCAGTGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	112482738	112485299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112482970_112483438_112483582_112483880_112484047_112484851
ENSMUSG00000029345.14_112482842_112485341_1	chr5	+	927	4	ISM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	8618	598	8618	-598	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAAGGATCTGGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	112482841	112485341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112482970_112483438_112483582_112483880_112484047_112484851
ENSMUSG00000029345.14_112482897_112485407_1	chr5	+	938	4	ISM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	8673	532	8673	-532	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTGAGCGATCTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	112482896	112485407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112482970_112483438_112483582_112483880_112484047_112484851
ENSMUSG00000029345.14_112483508_112485516_1	chr5	+	905	3	ISM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	9284	423	9284	-423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTGGGAACCAGTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	112483507	112485516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112483582_112483880_112484047_112484851
ENSMUSG00000029345.14_112483988_112485719_1	chr5	+	927	2	ISM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	9764	220	9764	-220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTCCCATGCCAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	112483987	112485719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112484047_112484851
ENSMUSG00000029352.15_113223828_113227640_1	chr5	-	258	3	ISM	ENSMUSG00000029352.15	ENST00000404334.1	496	4	783	56	783	-56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCCGCATCCGCGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	113227640	113223827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113223938_113226248_113226382_113227625
ENSMUSG00000029352.15_113223865_113227704_1	chr5	-	285	3	ISM	ENSMUSG00000029352.15	ENST00000404334.1	496	4	719	93	719	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	844	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAGTGGGACGCCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	113227704	113223864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113223938_113226248_113226382_113227625
ENSMUSG00000029352.15_113226255_113228392_1	chr5	-	293	3	ISM	ENSMUSG00000029352.15	ENST00000404334.1	496	4	31	2483	31	-2483	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGTAAGTCAGGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	113228392	113226254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113226382_113227625_113227745_113228345
ENSMUSG00000029359.14_118194602_118197554_1	chr5	+	156	2	ISM	ENSMUSG00000029359.14	ENST00000541210.5	618	6	28739	0	28739	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGTGCCAGAGGGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	118194601	118197554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_118194710_118197506
ENSMUSG00000029361.19_117979915_118005151_1	chr5	+	404	2	ISM	ENSMUSG00000029361.19	ENST00000618760.4	5295	30	106	86990	0	-86727	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGGTGACGTCAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	117979914	118005151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_117980081_118004913
ENSMUSG00000029361.19_118050839_118057559_1	chr5	+	459	5	ISM	ENSMUSG00000029361.19	ENSMUST00000102557.10	4591	29	45660	34415	45655	-34319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCTGGCCAATGTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	118050838	118057559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_118050933_118051861_118051967_118052448_118052508_118053611_118053714_118057460
ENSMUSG00000029361.19_118051881_118061422_1	chr5	+	478	5	ISM	ENSMUSG00000029361.19	ENSMUST00000102557.10	4591	29	46702	30552	46697	-30456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGATGAGCTCTGCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	118051880	118061422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_118051967_118052448_118052508_118053611_118053714_118057460_118057578_118061308
ENSMUSG00000029361.19_118085580_118091974_1	chr5	+	480	4	ISM	ENSMUSG00000029361.19	ENSMUST00000102557.10	4591	29	80401	0	80396	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCCCACGGGACCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	118085579	118091974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_118085634_118087698_118087894_118090829_118090949_118091862
ENSMUSG00000029361.19_118087756_118092082_1	chr5	+	477	3	ISM	ENSMUSG00000029361.19	ENSMUST00000102557.10	4591	29	82577	-108	82572	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGACTCTTGGGCTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	118087755	118092082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_118087894_118090829_118090949_118091862
ENSMUSG00000029363.15_117516168_117527112_1	chr5	-	2790	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACCGTCATGCACCGAG	NA	NA	NA	NA	NA	NA	NA	NA	117527112	117516167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525939_117525999_117526981
ENSMUSG00000029363.15_117516168_117527112_2	chr5	-	2791	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	797	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACCGTCATGCACCGAG	NA	NA	NA	NA	NA	NA	NA	NA	117527112	117516167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522665_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ENSMUSG00000029363.15_117516168_117527112_3	chr5	-	2790	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACCGTCATGCACCGAG	NA	NA	NA	NA	NA	NA	NA	NA	117527112	117516167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_117517966_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ENSMUSG00000029363.15_117516168_117527112_4	chr5	-	2789	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACCGTCATGCACCGAG	NA	NA	NA	NA	NA	NA	NA	NA	117527112	117516167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525992_117526981
ENSMUSG00000029363.15_117516168_117527112_5	chr5	-	2793	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACCGTCATGCACCGAG	NA	NA	NA	NA	NA	NA	NA	NA	117527112	117516167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521612_117522590_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ENSMUSG00000029363.15_117516168_117527112_6	chr5	-	2791	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACCGTCATGCACCGAG	NA	NA	NA	NA	NA	NA	NA	NA	117527112	117516167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524919_117525933_117525999_117526981
ENSMUSG00000029364.16_117512232_117514596_1	chr5	+	255	3	ISM	ENSMUSG00000029364.16	ENSMUST00000111959.2	1526	8	10645	1276	10645	-1276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCCACATGAGCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	117512231	117514596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_117512279_117513833_117514007_117514561
ENSMUSG00000029364.16_117513895_117514802_1	chr5	+	270	3	ISM	ENSMUSG00000029364.16	ENSMUST00000111959.2	1526	8	12308	1070	12308	-1070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGATGACCAATGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	117513894	117514802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_117514007_117514561_117514673_117514755
ENSMUSG00000029366.11_88912855_88930650_1	chr5	+	2588	7	FSM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	0	490	0	-490	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACTAGGAAATAAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	88912854	88930650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_88913206_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
ENSMUSG00000029366.11_88917462_88930968_1	chr5	+	2556	6	ISM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	4607	172	4607	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAATTGAGTGGATTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	88917461	88930968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
ENSMUSG00000029366.11_88917492_88931140_1	chr5	+	2698	6	ISM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	4637	0	4637	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGACTTTAAAATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88917491	88931140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
ENSMUSG00000029366.11_88917558_88931140_1	chr5	+	2632	6	ISM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	4703	0	4703	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGACTTTAAAATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88917557	88931140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
ENSMUSG00000029368.11_90608756_90618635_1	chr5	+	995	8	ISM	ENSMUSG00000029368.11	ENST00000503124.5	1406	10	-14	1908	0	-1908	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGGTCAAAACCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	90608755	90618635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_90608873_90610558_90610692_90612711_90612845_90613732_90613831_90615202_90615333_90616339_90616555_90617360_90617494_90618599
ENSMUSG00000029368.11_90610559_90618697_1	chr5	+	935	7	NNC	ENSMUSG00000029368.11	novel	1406	10	NA	NA	1789	-1846	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAGTTTTATCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	90610558	90618697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_90610692_90612711_90612845_90613732_90613831_90615207_90615333_90616339_90616555_90617360_90617494_90618599
ENSMUSG00000029368.11_90610559_90619910_1	chr5	+	987	8	ISM	ENSMUSG00000029368.11	ENST00000503124.5	1406	10	1789	633	1789	-633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCGTGGAGGCTGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	90610558	90619910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_90610692_90612711_90612845_90613732_90613831_90615202_90615333_90616339_90616555_90617360_90617494_90618599_90618698_90619863
ENSMUSG00000029368.11_90612795_90620355_1	chr5	+	899	8	ISM	ENSMUSG00000029368.11	ENST00000503124.5	1406	10	4025	188	4025	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGACCCCAGTGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	90612794	90620355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_90612845_90613732_90613831_90615202_90615333_90616339_90616555_90617360_90617494_90618599_90618698_90619863_90620003_90620319
ENSMUSG00000029368.11_90613740_90620455_1	chr5	+	937	7	NNC	ENSMUSG00000029368.11	novel	1406	10	NA	NA	4970	-88	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCCAAAGAGTTTAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	90613739	90620455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_90613831_90615207_90615333_90616339_90616555_90617360_90617494_90618599_90618698_90619863_90620003_90620319
ENSMUSG00000029368.11_90615202_90620543_1	chr5	+	940	6	ISM	ENSMUSG00000029368.11	ENST00000503124.5	1406	10	6432	0	6432	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAATATTTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	90615201	90620543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_90615333_90616339_90616555_90617360_90617494_90618599_90618698_90619863_90620003_90620319
ENSMUSG00000029370.11_90751911_90765632_1	chr5	-	752	7	NNC	ENSMUSG00000029370.11	novel	773	7	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGCAAAGTGAGTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	90765632	90751910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_90752000_90752104_90752224_90754273_90754326_90756657_90756852_90757573_90757669_90763653_90763790_90765565
ENSMUSG00000029370.11_90751911_90765632_2	chr5	-	754	7	NNC	ENSMUSG00000029370.11	novel	773	7	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGCAAAGTGAGTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	90765632	90751910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_90752000_90752104_90752219_90754273_90754326_90756657_90756852_90757573_90757669_90763653_90763797_90765565
ENSMUSG00000029370.11_90751911_90765632_3	chr5	-	759	7	FSM	ENSMUSG00000029370.11	ENST00000395777.6	773	7	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGCAAAGTGAGTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	90765632	90751910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_90752000_90752104_90752224_90754273_90754326_90756657_90756852_90757573_90757669_90763653_90763797_90765565
ENSMUSG00000029370.11_90751911_90765632_4	chr5	-	753	7	NNC	ENSMUSG00000029370.11	novel	773	7	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGCAAAGTGAGTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	90765632	90751910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_90752000_90752104_90752224_90754273_90754320_90756657_90756852_90757573_90757669_90763653_90763797_90765565
ENSMUSG00000029370.11_90751911_90765632_5	chr5	-	757	7	NNC	ENSMUSG00000029370.11	novel	773	7	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGCAAAGTGAGTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	90765632	90751910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_90752000_90752104_90752224_90754273_90754326_90756657_90756852_90757573_90757669_90763655_90763797_90765565
ENSMUSG00000029370.11_90751911_90765632_6	chr5	-	757	7	NNC	ENSMUSG00000029370.11	novel	773	7	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	934	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGCAAAGTGAGTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	90765632	90751910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_90752000_90752104_90752224_90754273_90754326_90756657_90756852_90757575_90757669_90763653_90763797_90765565
ENSMUSG00000029371.8_90907237_90909310_1	chr5	+	1402	4	FSM	ENSMUSG00000029371.8	ENSMUST00000031318.6	1575	4	0	173	0	-173	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATGGATTGCTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	90907236	90909310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_90907420_90907547_90907684_90907825_90907910_90908311
ENSMUSG00000029371.8_90907237_90909374_1	chr5	+	1466	4	FSM	ENSMUSG00000029371.8	ENSMUST00000031318.6	1575	4	0	109	0	-109	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGAGATTAATGAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	90907236	90909374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_90907420_90907547_90907684_90907825_90907910_90908311
ENSMUSG00000029371.8_90907376_90909483_1	chr5	+	1436	4	FSM	ENSMUSG00000029371.8	ENSMUST00000031318.6	1575	4	139	0	139	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATGTTGTCTCTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	90907375	90909483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_90907420_90907547_90907684_90907825_90907910_90908311
ENSMUSG00000029376.9_91080774_91107620_1	chr5	+	396	4	ISM	ENSMUSG00000029376.9	ENST00000433372.5	696	6	5	14652	5	-14652	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCACATTATCAATATT	NA	NA	NA	NA	NA	NA	NA	NA	91080773	91107620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_91080805_91094648_91094834_91096681_91096805_91107563
ENSMUSG00000029376.9_91096757_91122217_1	chr5	+	345	4	ISM	ENSMUSG00000029376.9	ENST00000433372.5	696	6	15988	55	15988	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGAACAACTGAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	91096756	91122217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_91096805_91107563_91107717_91109148_91109257_91122181
ENSMUSG00000029378.6_91287458_91296164_1	chr5	+	1088	6	FSM	ENSMUSG00000029378.6	ENSMUST00000031325.6	1215	6	0	127	0	-127	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTCTTACTTCTGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	91287457	91296164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_91287734_91288756_91288985_91291347_91291550_91292192_91292355_91294496_91294606_91296053
ENSMUSG00000029378.6_91287614_91296291_1	chr5	+	1059	6	FSM	ENSMUSG00000029378.6	ENSMUST00000031325.6	1215	6	156	0	156	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGAGTTTGGATATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	91287613	91296291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_91287734_91288756_91288985_91291347_91291550_91292192_91292355_91294496_91294606_91296053
ENSMUSG00000029380.12_91039102_91040846_1	chr5	+	823	4	FSM	ENSMUSG00000029380.12	ENSMUST00000031327.9	953	4	2	128	2	-128	multi-exon	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTAGTTGGTAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	91039101	91040846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_91039240_91039328_91039453_91039567_91039649_91040366
ENSMUSG00000029380.12_91039323_91040980_1	chr5	+	825	3	ISM	ENSMUSG00000029380.12	ENSMUST00000031327.9	953	4	223	-6	223	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACATGGGTGCTTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	91039322	91040980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_91039453_91039567_91039649_91040366
ENSMUSG00000029385.15_93415498_93423135_1	chr5	+	1473	8	FSM	ENSMUSG00000029385.15	ENSMUST00000031331.13	2810	8	382	955	382	-948	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCAGGCCTTTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	93415497	93423135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
ENSMUSG00000029385.15_93419222_93423951_1	chr5	+	1524	3	ISM	ENSMUSG00000029385.15	ENSMUST00000121127.2	2570	7	3049	132	3049	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATACTCAGACATTGATG	NA	NA	NA	NA	NA	NA	NA	NA	93419221	93423951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_93419321_93421196_93421403_93422732
ENSMUSG00000029387.11_124728416_124733724_1	chr5	+	333	5	ISM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	11213	2019	11213	-2019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATGTCTGCTCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	124728415	124733724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615
ENSMUSG00000029387.11_124730541_124734037_1	chr5	+	356	5	ISM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	13338	1706	13338	-1706	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCCCTGTGACCAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	124730540	124734037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ENSMUSG00000029387.11_124733715_124734246_1	chr5	+	340	3	ISM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	16512	1497	16512	-1497	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTTGCTGTTTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	124733714	124734246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124733752_124733865_124733903_124733980
ENSMUSG00000029388.15_124709207_124712689_1	chr5	-	511	5	ISM	ENSMUSG00000029388.15	ENSMUST00000031334.15	2013	9	4505	931	4505	-931	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGCCTCTCCACGCCA	NA	NA	NA	NA	NA	NA	NA	NA	124712689	124709206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660
ENSMUSG00000029388.15_124709354_124714916_1	chr5	-	504	6	ISM	ENSMUSG00000029388.15	ENSMUST00000031334.15	2013	9	2278	1078	2278	-1078	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTACACCTCCCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	124714916	124709353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860
ENSMUSG00000029388.15_124709371_124714931_1	chr5	-	502	6	ISM	ENSMUSG00000029388.15	ENSMUST00000031334.15	2013	9	2263	1095	2263	-1095	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAACACCCATGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	124714931	124709370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860
ENSMUSG00000029388.15_124711794_124716601_1	chr5	-	493	5	ISM	ENSMUSG00000029388.15	ENSMUST00000031334.15	2013	9	593	3518	593	-3518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTCAACGTCCCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	124716601	124711793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499
ENSMUSG00000029388.15_124711794_124717104_1	chr5	-	534	6	ISM	ENSMUSG00000029388.15	ENSMUST00000031334.15	2013	9	90	3518	90	-3518	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTCAACGTCCCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	124717104	124711793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124717063
ENSMUSG00000029390.14_124678758_124681063_1	chr5	+	376	2	ISM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	0	7506	0	-7506	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGAGACCGGGAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	124678757	124681063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124679105_124681034
ENSMUSG00000029390.14_124679018_124684976_1	chr5	+	298	3	ISM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	260	3593	260	-3593	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	894	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGATTAATGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	124679017	124684976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124679105_124681034_124681228_124684958
ENSMUSG00000029390.14_124679018_124685030_1	chr5	+	352	3	ISM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	260	3539	260	-3539	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1493	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACATGGAAGTCCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	124679017	124685030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124679105_124681034_124681228_124684958
ENSMUSG00000029390.14_124681143_124687255_1	chr5	+	305	3	ISM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	2385	1314	2385	-1314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGTTGTTTAAAAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	124681142	124687255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124681228_124684958_124685067_124687143
ENSMUSG00000029390.14_124685010_124687473_1	chr5	+	387	2	ISM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	6252	1096	6252	-1096	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1677	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGCCCCATTATATAGGC	NA	NA	NA	NA	NA	NA	NA	NA	124685009	124687473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124685067_124687143
ENSMUSG00000029392.13_124631143_124653699_1	chr5	-	1381	5	ISM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	15755	0	15755	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTCCTGTGTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	124653699	124631142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124631908_124639902_124639996_124641617_124641797_124652581_124652807_124653580
ENSMUSG00000029392.13_124631340_124659413_1	chr5	-	1284	6	ISM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	10041	197	10041	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACTACCCAGTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	124659413	124631339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124631908_124639902_124639996_124641617_124641797_124652581_124652807_124653580_124653700_124659313
ENSMUSG00000029392.13_124631600_124668899_1	chr5	-	1237	7	FSM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	555	457	555	-457	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCGAAACCCTTAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	124668899	124631599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_124631908_124639902_124639996_124641617_124641797_124652581_124652807_124653580_124653700_124659313_124659465_124668737
ENSMUSG00000029392.13_124631727_124669182_1	chr5	-	1393	7	FSM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	272	584	272	-584	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCGGCCGCCTCAACAT	NA	NA	NA	NA	NA	NA	NA	NA	124669182	124631726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_124631908_124639902_124639996_124641617_124641797_124652581_124652807_124653580_124653700_124659313_124659465_124668737
ENSMUSG00000029392.13_124639927_124669302_1	chr5	-	1308	6	ISM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	152	8784	152	-8784	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGAATCGGGGATCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	124669302	124639926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124639996_124641617_124641797_124652581_124652807_124653580_124653700_124659313_124659465_124668737
ENSMUSG00000029394.12_124483668_124486680_1	chr5	-	567	2	ISM	ENSMUSG00000029394.12	ENSMUST00000111473.8	715	3	1637	-139	1637	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCATCTACCCAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	124486680	124483667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124484218_124486663
ENSMUSG00000029394.12_124483826_124488185_1	chr5	-	564	3	FSM	ENSMUSG00000029394.12	ENSMUST00000111473.8	715	3	132	19	132	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGGAGTTGAGTGCAAACC	NA	NA	NA	NA	NA	NA	NA	NA	124488185	124483825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_124484218_124486663_124486791_124488140
ENSMUSG00000029394.12_124484090_124492559_1	chr5	-	530	4	FSM	ENSMUSG00000029394.12	ENSMUST00000031341.11	1315	4	175	610	175	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGTCATTTTTCTACC	NA	NA	NA	NA	NA	NA	NA	NA	124492559	124484089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_124484218_124486663_124486791_124488140_124488236_124492379
ENSMUSG00000029394.12_124486663_124492734_1	chr5	-	578	3	ISM	ENSMUSG00000029394.12	ENSMUST00000031341.11	1315	4	0	3183	0	-2573	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCGTGGTTAGGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	124492734	124486662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124486791_124488140_124488236_124492379
ENSMUSG00000029397.16_92096860_92101117_1	chr5	-	1116	5	ISM	ENSMUSG00000029397.16	ENSMUST00000169948.2	1417	8	9477	0	9472	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTGTTTTACAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	92101117	92096859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072
ENSMUSG00000029397.16_92097069_92105472_1	chr5	-	1051	6	NNC	ENSMUSG00000029397.16	novel	650	7	NA	NA	5117	-209	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTCTCTCTGTGTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	92105472	92097068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_92097724_92099679_92099801_92100898_92100971_92101072_92101118_92103393_92103473_92105393
ENSMUSG00000029397.16_92097134_92105758_1	chr5	-	1059	8	ISM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	5169	371	4831	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTCTCTCTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	92105758	92097133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736
ENSMUSG00000029397.16_92097169_92105825_1	chr5	-	1091	8	ISM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	5102	406	4764	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTAATTACGTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	92105825	92097168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736
ENSMUSG00000029397.16_92097246_92105856_1	chr5	-	1045	8	ISM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	5071	483	4733	349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTGATAGAACTACATT	NA	NA	NA	NA	NA	NA	NA	NA	92105856	92097245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736
ENSMUSG00000029397.16_92097448_92110701_1	chr5	-	1056	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	226	685	-107	147	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATGGAAATGTAATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	92110701	92097447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
ENSMUSG00000029397.16_92097595_92110585_1	chr5	-	640	7	NNC	ENSMUSG00000029397.16	novel	650	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTGTCCTTGGCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	92110585	92097594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_92097724_92099685_92099801_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92110488
ENSMUSG00000029397.16_92097595_92110585_2	chr5	-	640	7	NNC	ENSMUSG00000029397.16	novel	650	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTGTCCTTGGCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	92110585	92097594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_92097724_92099679_92099801_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105504_92110488
ENSMUSG00000029397.16_92097595_92110585_3	chr5	-	646	7	FSM	ENSMUSG00000029397.16	ENST00000507014.1	650	7	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTGTCCTTGGCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	92110585	92097594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_92097724_92099679_92099801_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92110488
ENSMUSG00000029397.16_92097595_92110927_1	chr5	-	1121	8	NNC	ENSMUSG00000029397.16	novel	1967	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTGTCCTTGGCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	92110927	92097594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_92097724_92099679_92099801_92100898_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
ENSMUSG00000029401.9_124601328_124607912_1	chr5	-	804	3	ISM	ENSMUSG00000029401.9	ENSMUST00000031347.8	1391	4	8517	0	8517	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAACGCATGTGTATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	124607912	124601327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124601875_124606649_124606755_124607760
ENSMUSG00000029401.9_124601569_124615996_1	chr5	-	717	4	FSM	ENSMUSG00000029401.9	ENSMUST00000031347.8	1391	4	433	241	433	-241	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGGCCTCTGGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	124615996	124601568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_124601875_124606649_124606755_124607760_124607913_124615842
ENSMUSG00000029401.9_124601692_124616107_1	chr5	-	705	4	FSM	ENSMUSG00000029401.9	ENSMUST00000031347.8	1391	4	322	364	322	-364	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCTGGGGACAGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	124616107	124601691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_124601875_124606649_124606755_124607760_124607913_124615842
ENSMUSG00000029401.9_124601730_124616174_1	chr5	-	734	4	FSM	ENSMUSG00000029401.9	ENSMUST00000031347.8	1391	4	255	402	255	-402	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTCAGAGGAAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	124616174	124601729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_124601875_124606649_124606755_124607760_124607913_124615842
ENSMUSG00000029401.9_124606648_124616373_1	chr5	-	790	3	ISM	ENSMUSG00000029401.9	ENSMUST00000031347.8	1391	4	56	5320	56	-5320	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACCTGGATGCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	124616373	124606647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124606755_124607760_124607913_124615842
ENSMUSG00000029404.16_124254152_124256108_1	chr5	+	1051	5	FSM	ENSMUSG00000029404.16	ENSMUST00000031351.11	1192	5	-10	151	-10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCATCCCAGGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	124254151	124256108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
ENSMUSG00000029404.16_124254511_124255105_1	chr5	+	317	2	ISM	ENSMUSG00000029404.16	ENST00000315580.10	733	5	16	1003	2	-1003	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAGGAAGAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	124254510	124255105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124254675_124254952
ENSMUSG00000029404.16_124254511_124256108_1	chr5	+	659	5	FSM	ENSMUSG00000029404.16	ENST00000426960.6	661	5	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCATCCCAGGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	124254510	124256108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_124254642_124254977_124255257_124255333_124255452_124255892_124255963_124256047
ENSMUSG00000029404.16_124254511_124256108_2	chr5	+	660	5	NNC	ENSMUSG00000029404.16	novel	661	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCATCCCAGGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	124254510	124256108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_124254643_124254977_124255257_124255333_124255452_124255892_124255963_124256047
ENSMUSG00000029404.16_124254511_124256259_1	chr5	+	843	5	FSM	ENSMUSG00000029404.16	ENSMUST00000031351.11	1192	5	349	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	124254510	124256259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
ENSMUSG00000029405.17_92200023_92231372_1	chr5	-	4104	12	FSM	ENSMUSG00000029405.17	ENST00000677060.1	4097	12	-2	-5	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTATCTATGTCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	92231372	92200022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_92200525_92200570_92202913_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ENSMUSG00000029405.17_92200472_92285466_1	chr5	-	3532	12	FSM	ENSMUSG00000029405.17	ENST00000677952.1	4074	12	129	413	79	-413	multi-exon	FALSE	canonical	NA	NA	NA	NA	2381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGACAAAAGACAGATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	92285466	92200471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_92200525_92200570_92202913_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92285410
ENSMUSG00000029405.17_92202750_92212326_1	chr5	-	756	6	ISM	ENSMUSG00000029405.17	ENST00000395719.7	4060	12	8819	2735	8819	-324	internal_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATCGTGACGGAAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	92212326	92202749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183
ENSMUSG00000029405.17_92203243_92214441_1	chr5	-	726	6	ISM	ENSMUSG00000029405.17	ENSMUST00000167918.8	4232	11	16975	3238	6704	-817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGATTTAAGGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	92214441	92203242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350
ENSMUSG00000029405.17_92204219_92216295_1	chr5	-	727	7	ISM	ENSMUSG00000029405.17	ENST00000395719.7	4060	12	4850	4204	4850	-1793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAATTCGCTATCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	92216295	92204218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183
ENSMUSG00000029405.17_92211196_92285304_1	chr5	-	853	7	ISM	ENSMUSG00000029405.17	ENST00000677970.1	1823	12	241	8770	241	-8770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACCAATCTGTGAACACA	NA	NA	NA	NA	NA	NA	NA	NA	92285304	92211195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92285181
ENSMUSG00000029405.17_92212268_92285482_1	chr5	-	739	7	ISM	ENSMUSG00000029405.17	ENST00000677970.1	1823	12	63	9842	63	-9842	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACACTTGGAAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	92285482	92212267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92285181_92285302_92285410
ENSMUSG00000029406.16_124257985_124258781_1	chr5	-	636	2	ISM	ENSMUSG00000029406.16	ENST00000280562.9	6615	26	95706	1232	66464	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGGGGCTCTGTGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	124258781	124257984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124258522_124258682
ENSMUSG00000029406.16_124261006_124263006_1	chr5	-	624	5	ISM	ENSMUSG00000029406.16	ENSMUST00000161938.8	5866	25	62239	3196	62239	-3196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAAACACACCGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	124263006	124261005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124262860
ENSMUSG00000029406.16_124261227_124263498_1	chr5	-	643	5	ISM	ENSMUSG00000029406.16	ENSMUST00000161938.8	5866	25	61747	3417	61747	-3417	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGCCCTTAGACATGGT	NA	NA	NA	NA	NA	NA	NA	NA	124263498	124261226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124261305_124261605_124261723_124262001_124262151_124262860_124263023_124263361
ENSMUSG00000029406.16_124261641_124265312_1	chr5	-	631	5	ISM	ENSMUSG00000029406.16	ENSMUST00000161938.8	5866	25	59933	3831	59933	-3831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGCAGCGCAAGAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	124265312	124261640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124261723_124262001_124262151_124262860_124263023_124263361_124263527_124265239
ENSMUSG00000029413.15_92406466_92410404_1	chr5	-	481	4	ISM	ENSMUSG00000029413.15	ENSMUST00000159345.8	1629	11	15620	174	15620	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGAGGCTTAGTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	92410404	92406465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92406803_92407412_92407491_92409210_92409240_92410367
ENSMUSG00000029415.5_92431869_92437940_1	chr5	-	3269	4	ISM	ENSMUSG00000029415.5	ENSMUST00000031364.5	5020	22	19943	0	19813	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTGAAATCTCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	92437940	92431868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779
ENSMUSG00000029415.5_92433039_92451625_1	chr5	-	3230	17	ISM	ENSMUSG00000029415.5	ENSMUST00000031364.5	5020	22	6258	1170	6128	-1170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAATGTTAGACCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	92451625	92433038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524
ENSMUSG00000029416.18_127673548_127677561_1	chr5	-	367	2	ISM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	16919	820	16919	-820	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCCTCCCTATGCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	127677561	127673547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_127673837_127677483
ENSMUSG00000029416.18_127677483_127680807_1	chr5	-	367	3	ISM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	13673	4755	13673	-4755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTTGATGTCTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	127680807	127677482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_127677643_127678921_127679078_127680756
ENSMUSG00000029416.18_127677525_127680877_1	chr5	-	395	3	ISM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	13603	4797	13603	-4797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGGCCATTGGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	127680877	127677524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_127677643_127678921_127679078_127680756
ENSMUSG00000029416.18_127680871_127685893_1	chr5	-	360	4	ISM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	8587	8143	8587	-8143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAAGGACAAGCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	127685893	127680870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_127680926_127681174_127681253_127681601_127681771_127685835
ENSMUSG00000029416.18_127681670_127686075_1	chr5	-	341	2	ISM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	8405	8942	8405	-8942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGCCCTGGTCAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	127686075	127681669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_127681771_127685835
ENSMUSG00000029422.16_123867070_123881741_1	chr5	-	1312	8	ISM	ENSMUSG00000029422.16	ENSMUST00000182955.8	1685	11	5693	40	5693	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACCCACTTCCATTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	123881741	123867069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700
ENSMUSG00000029422.16_123867310_123887430_1	chr5	-	1308	10	FSM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	47	240	4	-61	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAACCCACACACAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	123887430	123867309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
ENSMUSG00000029426.9_92590607_92594241_1	chr5	-	1616	2	ISM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	59255	1434	59255	-1434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGAATTCCCTGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	92594241	92590606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92592144_92594162
ENSMUSG00000029426.9_92590667_92594289_1	chr5	-	1604	2	ISM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	59207	1494	59207	-1494	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTACACCATTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	92594289	92590666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92592144_92594162
ENSMUSG00000029426.9_92590877_92599274_1	chr5	-	1621	5	ISM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	54222	1704	54222	-1704	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGTCCATGATTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	92599274	92590876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205
ENSMUSG00000029426.9_92590984_92601934_1	chr5	-	1600	6	ISM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	51562	1811	51562	-1811	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAGGAGTCGAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	92601934	92590983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898
ENSMUSG00000029426.9_92591027_92602002_1	chr5	-	1625	6	ISM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	51494	1854	51494	-1854	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACAGAGCGAGAAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	92602002	92591026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898
ENSMUSG00000029426.9_92591407_92608700_1	chr5	-	1611	9	ISM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	44796	2234	44796	-2234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTGGTGAGGGTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	92608700	92591406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612
ENSMUSG00000029426.9_92591569_92609865_1	chr5	-	1620	10	ISM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	43631	2396	43631	-2396	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTTCAGGAAAATAACTC	NA	NA	NA	NA	NA	NA	NA	NA	92609865	92591568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795
ENSMUSG00000029426.9_92591752_92633129_1	chr5	-	1589	11	ISM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	20367	2579	20367	-2579	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGTGCTTCATTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	92633129	92591751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055
ENSMUSG00000029426.9_92591814_92633192_1	chr5	-	1590	11	ISM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	20304	2641	20304	-2641	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCCCCTGTTGTAGATA	NA	NA	NA	NA	NA	NA	NA	NA	92633192	92591813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055
ENSMUSG00000029426.9_92591935_92653137_1	chr5	-	1577	12	FSM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	359	2762	359	-2762	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGCAATTCTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	92653137	92591934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055_92633214_92653050
ENSMUSG00000029426.9_92591991_92653254_1	chr5	-	1638	12	FSM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	242	2818	242	-2818	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGCACTGGCAAGCGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	92653254	92591990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055_92633214_92653050
ENSMUSG00000029426.9_92594273_92653496_1	chr5	-	1617	11	ISM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	0	5100	0	-5100	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGACTTTGGTTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	92653496	92594272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055_92633214_92653050
ENSMUSG00000029427.12_123836910_123840716_1	chr5	-	2367	2	ISM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	18391	545	18391	-545	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCACTGCCAGTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	123840716	123836909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_123839186_123840625
ENSMUSG00000029427.12_123837241_123845474_1	chr5	-	2412	5	ISM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	13633	876	13633	-876	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTAAACATGTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	123845474	123837240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331
ENSMUSG00000029427.12_123837623_123847514_1	chr5	-	2370	9	ISM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	11593	1258	11593	-1258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGACACATACTGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	123847514	123837622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444
ENSMUSG00000029430.14_129097133_129099609_1	chr5	+	827	6	ISM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	0	1778	0	-312	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGTTCTTTTTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	129097132	129099609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438
ENSMUSG00000029430.14_129097266_129099922_1	chr5	+	779	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	133	1465	-70	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCAACTGTCCTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	129097265	129099922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ENSMUSG00000029430.14_129097755_129099922_1	chr5	+	699	5	FSM	ENSMUSG00000029430.14	ENST00000392367.4	698	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCAACTGTCCTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	129097754	129099922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_129097833_129097929_129098107_129099066_129099255_129099438_129099610_129099837
ENSMUSG00000029430.14_129097755_129099922_2	chr5	+	698	5	NNC	ENSMUSG00000029430.14	novel	698	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCAACTGTCCTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	129097754	129099922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_129097833_129097929_129098107_129099067_129099255_129099438_129099610_129099837
ENSMUSG00000029430.14_129097938_129100168_1	chr5	+	808	4	ISM	ENSMUSG00000029430.14	ENSMUST00000111343.2	2423	6	602	1219	183	247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCATTCCCATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	129097937	129100168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129098056_129099066_129099255_129099438_129099610_129099837
ENSMUSG00000029430.14_129097969_129100140_1	chr5	+	749	4	ISM	ENSMUSG00000029430.14	ENSMUST00000111343.2	2423	6	633	1247	214	219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATCCAGTGGGGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	129097968	129100140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129098056_129099066_129099255_129099438_129099610_129099837
ENSMUSG00000029430.14_129097976_129100248_1	chr5	+	850	4	ISM	ENSMUSG00000029430.14	ENSMUST00000111343.2	2423	6	640	1139	221	327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTAAAGCCACTAACAC	NA	NA	NA	NA	NA	NA	NA	NA	129097975	129100248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129098056_129099066_129099255_129099438_129099610_129099837
ENSMUSG00000029430.14_129097998_129100105_1	chr5	+	685	4	ISM	ENSMUSG00000029430.14	ENSMUST00000111343.2	2423	6	662	1282	243	184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATTTCAAAGATAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	129097997	129100105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129098056_129099066_129099255_129099438_129099610_129099837
ENSMUSG00000029430.14_129099140_129100375_1	chr5	+	824	3	ISM	ENSMUSG00000029430.14	ENST00000392367.4	698	5	1385	-454	1385	454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCAGCTAGGATGATATC	NA	NA	NA	NA	NA	NA	NA	NA	129099139	129100375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129099255_129099438_129099610_129099837
ENSMUSG00000029430.14_129099492_129100514_1	chr5	+	795	2	ISM	ENSMUSG00000029430.14	ENST00000392367.4	698	5	1737	-593	1737	593	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCTTCAGAAGTTAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	129099491	129100514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129099610_129099837
ENSMUSG00000029430.14_129099556_129100566_1	chr5	+	783	2	ISM	ENSMUSG00000029430.14	ENST00000392367.4	698	5	1801	-645	1801	645	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGACTACATTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	129099555	129100566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129099610_129099837
ENSMUSG00000029432.13_129802127_129835391_1	chr5	+	2107	10	NNC	ENSMUSG00000029432.13	novel	2112	10	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGCACGATTGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	129802126	129835391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_129802286_129816535_129816676_129816781_129816828_129821773_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129830289_129830385_129831905_129831990_129834142
ENSMUSG00000029432.13_129802127_129835391_4	chr5	+	2104	10	NNC	ENSMUSG00000029432.13	novel	2112	10	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGCACGATTGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	129802126	129835391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_129802286_129816535_129816668_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129830289_129830385_129831905_129831990_129834142
ENSMUSG00000029432.13_129802127_129835391_5	chr5	+	2107	10	NNC	ENSMUSG00000029432.13	novel	2112	10	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGCACGATTGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	129802126	129835391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_129802286_129816540_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129830289_129830385_129831905_129831990_129834142
ENSMUSG00000029432.13_129802127_129835391_6	chr5	+	2103	10	NNC	ENSMUSG00000029432.13	novel	2112	10	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGCACGATTGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	129802126	129835391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129830289_129830385_129831914_129831990_129834142
ENSMUSG00000029433.17_123649768_123658235_1	chr5	-	1343	4	ISM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	4004	0	3212	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTTTTCAGAATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	123658235	123649767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103
ENSMUSG00000029433.17_123649950_123662175_1	chr5	-	1330	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	64	182	0	-182	multi-exon	FALSE	canonical	NA	NA	NA	NA	1290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCAGCGTCTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	123662175	123649949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUSG00000029433.17_123650039_123662196_1	chr5	-	1262	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	43	271	0	-271	multi-exon	FALSE	canonical	NA	NA	NA	NA	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTTCTCTGCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	123662196	123650038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUSG00000029433.17_123650145_123662239_1	chr5	-	1199	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	0	377	0	221	multi-exon	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCTGTGAGCACAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	123662239	123650144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUSG00000029433.17_123650530_123661447_1	chr5	-	573	4	NNC	ENSMUSG00000029433.17	novel	579	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGATGGTATCCACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	123661447	123650529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_123650771_123655799_123655897_123656023_123656129_123661317
ENSMUSG00000029433.17_123650530_123661447_2	chr5	-	579	4	FSM	ENSMUSG00000029433.17	ENST00000353548.11	579	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGATGGTATCCACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	123661447	123650529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123661317
ENSMUSG00000029433.17_123650557_123655801_1	chr5	-	263	2	ISM	ENSMUSG00000029433.17	ENST00000267169.11	758	5	5646	27	5646	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCCATCCACTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	123655801	123650556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_123650794_123655775
ENSMUSG00000029433.17_123650660_123656034_1	chr5	-	272	3	ISM	ENSMUSG00000029433.17	ENST00000267169.11	758	5	5413	130	5413	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAAAAGAGCTGCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	123656034	123650659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_123650794_123655775_123655897_123656017
ENSMUSG00000029433.17_123650700_123656099_1	chr5	-	297	3	ISM	ENSMUSG00000029433.17	ENST00000267169.11	758	5	5348	170	5348	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCTCCCAGAAGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	123656099	123650699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_123650794_123655775_123655897_123656017
ENSMUSG00000029434.13_123669088_123711042_1	chr5	-	1809	13	FSM	ENSMUSG00000029434.13	ENST00000267199.9	1816	13	7	0	7	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACAGGTCACCACACAAT	NA	NA	NA	NA	NA	NA	NA	NA	123711042	123669087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_123669280_123669883_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ENSMUSG00000029434.13_123669088_123711042_2	chr5	-	1810	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	59	2366	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACAGGTCACCACACAAT	NA	NA	NA	NA	NA	NA	NA	NA	123711042	123669087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ENSMUSG00000029434.13_123669088_123711047_1	chr5	-	1807	13	NNC	ENSMUSG00000029434.13	novel	1816	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACAGGTCACCACACAAT	NA	NA	NA	NA	NA	NA	NA	NA	123711047	123669087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_123669280_123669883_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709599_123710942
ENSMUSG00000029434.13_123669088_123711047_2	chr5	-	1810	13	NIC	ENSMUSG00000029434.13	novel	1816	13	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACAGGTCACCACACAAT	NA	NA	NA	NA	NA	NA	NA	NA	123711047	123669087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_-_123669280_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ENSMUSG00000029434.13_123669088_123711047_3	chr5	-	1807	13	NNC	ENSMUSG00000029434.13	novel	1816	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACAGGTCACCACACAAT	NA	NA	NA	NA	NA	NA	NA	NA	123711047	123669087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_123669280_123669883_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696683_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ENSMUSG00000029434.13_123669088_123711047_4	chr5	-	1806	13	NNC	ENSMUSG00000029434.13	novel	1816	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACAGGTCACCACACAAT	NA	NA	NA	NA	NA	NA	NA	NA	123711047	123669087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_123669280_123669883_123670057_123671920_123672059_123673276_123673407_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ENSMUSG00000029434.13_123669088_123711047_5	chr5	-	1815	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	54	2366	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACAGGTCACCACACAAT	NA	NA	NA	NA	NA	NA	NA	NA	123711047	123669087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ENSMUSG00000029439.15_129590276_129619196_1	chr5	+	774	6	ISM	ENSMUSG00000029439.15	ENSMUST00000053737.9	3313	18	11991	29252	11991	-29252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGCTGAAGGTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	129590275	129619196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102
ENSMUSG00000029439.15_129616693_129626714_1	chr5	+	773	5	ISM	ENSMUSG00000029439.15	ENSMUST00000053737.9	3313	18	38408	21734	38408	-21734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTACCCAGGAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	129616692	129626714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517
ENSMUSG00000029439.15_129627842_129648122_1	chr5	+	806	6	ISM	ENSMUSG00000029439.15	ENSMUST00000053737.9	3313	18	49557	326	49557	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCTGAGACGGCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	129627841	129648122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ENSMUSG00000029440.16_123366253_123388194_1	chr5	+	2589	6	NNC	ENSMUSG00000029440.16	novel	2597	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	873	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCCTCTTGGGATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	123366252	123388194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_123366508_123372656_123372760_123377612_123377814_123379894_123379997_123384256_123384346_123386355
ENSMUSG00000029440.16_123366253_123388194_2	chr5	+	2589	6	NNC	ENSMUSG00000029440.16	novel	2597	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCCTCTTGGGATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	123366252	123388194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_123366508_123372656_123372760_123377604_123377806_123379894_123379997_123384256_123384346_123386355
ENSMUSG00000029440.16_123372657_123386396_1	chr5	+	541	5	FSM	ENSMUSG00000029440.16	ENST00000261817.6	540	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTGCAGGAAGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	123372656	123386396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_123372760_123377604_123377814_123379894_123379997_123384259_123384346_123386355
ENSMUSG00000029446.15_129842825_129848575_1	chr5	-	604	5	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	15938	203	7662	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTTCTCAAAGCCACACA	NA	NA	NA	NA	NA	NA	NA	NA	129848575	129842824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539
ENSMUSG00000029446.15_129842864_129848641_1	chr5	-	631	5	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	15872	242	7596	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTGAGCTTGACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	129848641	129842863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539
ENSMUSG00000029446.15_129843506_129856113_1	chr5	-	592	5	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	8400	884	124	-884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGAAGCCTGTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	129856113	129843505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085
ENSMUSG00000029446.15_129843564_129856237_1	chr5	-	658	5	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	8276	942	0	-942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAGGAAAAATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	129856237	129843563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085
ENSMUSG00000029446.15_129843615_129856237_1	chr5	-	607	5	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	8276	993	0	-993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGATGCAGCCGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	129856237	129843614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085
ENSMUSG00000029446.15_129846383_129856478_1	chr5	-	638	5	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	8035	3761	-241	-3761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGGAGCACGTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	129856478	129846382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_129846449_129847669_129847805_129848539_129848697_129856085_129856313_129856425
ENSMUSG00000029446.15_129847764_129864096_1	chr5	-	586	5	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	417	5142	417	-5142	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTCACTCAGCGCCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	129864096	129847763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_129847805_129848539_129848697_129856085_129856313_129856425_129856509_129864018
ENSMUSG00000029446.15_129848627_129864231_1	chr5	-	593	4	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	282	6005	282	-6005	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGATGTTGATAGCACCG	NA	NA	NA	NA	NA	NA	NA	NA	129864231	129848626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_129848697_129856085_129856313_129856425_129856509_129864018
ENSMUSG00000029446.15_129856213_129864413_1	chr5	-	578	3	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	100	13591	100	-13591	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGCCTTACGGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	129864413	129856212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_129856313_129856425_129856509_129864018
ENSMUSG00000029447.14_129864062_129874496_1	chr5	+	1964	13	ISM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	0	716	0	-245	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	2796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGTACACGATCATGG	NA	NA	NA	NA	NA	NA	NA	NA	129864061	129874496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423
ENSMUSG00000029447.14_129864276_129874638_1	chr5	+	1800	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	214	574	214	-103	multi-exon	FALSE	canonical	NA	NA	NA	NA	3136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTCCTCTCTGAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	129864275	129874638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ENSMUSG00000029447.14_129864276_129874741_1	chr5	+	1903	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	214	471	214	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCTGATTGGAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	129864275	129874741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ENSMUSG00000029447.14_129864504_129874950_1	chr5	+	1879	14	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	6	209	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAATGGTTTTCTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	129864503	129874950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874428_129874497_129874588
ENSMUSG00000029447.14_129864504_129874950_2	chr5	+	1884	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	442	262	6	209	multi-exon	FALSE	canonical	NA	NA	NA	NA	4335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAATGGTTTTCTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	129864503	129874950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ENSMUSG00000029447.14_129865298_129875060_1	chr5	+	1858	13	ISM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	1236	152	800	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAAGAATAATTTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	129865297	129875060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ENSMUSG00000029447.14_129866116_129875212_1	chr5	+	1947	12	ISM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	2054	0	1618	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTTGAAATGACTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	129866115	129875212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ENSMUSG00000029452.19_121601800_121633193_1	chr5	+	924	8	FSM	ENSMUSG00000029452.19	ENST00000355445.7	870	8	-54	0	-54	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGCCCAAACCTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	121601799	121633193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_121601897_121602861_121602926_121605916_121606049_121627264_121627395_121629138_121629278_121631693_121631839_121632266_121632341_121633050
ENSMUSG00000029452.19_121602856_121633193_1	chr5	+	827	7	NNC	ENSMUSG00000029452.19	novel	870	8	NA	NA	1002	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGCCCAAACCTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	121602855	121633193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_121602926_121605916_121606049_121627264_121627395_121629138_121629278_121631693_121631833_121632266_121632341_121633050
ENSMUSG00000029455.15_121705836_121707010_1	chr5	-	273	2	ISM	ENSMUSG00000029455.15	ENSMUST00000031411.15	3867	13	24877	1746	11774	-1746	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGATGCTGCCTTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	121707010	121705835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121706087_121706988
ENSMUSG00000029455.15_121705942_121708705_1	chr5	-	299	3	ISM	ENSMUSG00000029455.15	ENSMUST00000031411.15	3867	13	23182	1852	10079	-1852	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTCAAGAAAGAATTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	121708705	121705941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121706087_121706988_121707104_121708666
ENSMUSG00000029455.15_121706989_121710109_1	chr5	-	303	3	ISM	ENSMUSG00000029455.15	ENSMUST00000031411.15	3867	13	21778	2899	8675	1390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTACACAGCCTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	121710109	121706988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121707104_121708666_121708825_121710079
ENSMUSG00000029455.15_121707051_121710148_1	chr5	-	280	3	ISM	ENSMUSG00000029455.15	ENSMUST00000031411.15	3867	13	21739	2961	8636	1328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGGGAGTGGCAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	121710148	121707050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121707104_121708666_121708825_121710079
ENSMUSG00000029455.15_121708666_121718784_1	chr5	-	1155	9	FSM	ENSMUSG00000029455.15	ENST00000416293.7	1155	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGCTGCTCCTCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	121718784	121708665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_121708825_121710079_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121718676
ENSMUSG00000029455.15_121708741_121718718_1	chr5	-	1014	9	FSM	ENSMUSG00000029455.15	ENST00000416293.7	1155	9	66	75	66	-75	multi-exon	FALSE	canonical	NA	NA	NA	NA	2857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCCGCCGTCTTCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	121718718	121708740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_121708825_121710079_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121718676
ENSMUSG00000029455.15_121714038_121717729_1	chr5	-	305	4	ISM	ENSMUSG00000029455.15	ENSMUST00000129753.8	1799	11	13914	5659	1055	-5372	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGGGAACGTGGTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	121717729	121714037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121714088_121714519_121714632_121716405_121716486_121717666
ENSMUSG00000029455.15_121716415_121718747_1	chr5	-	283	3	ISM	ENSMUSG00000029455.15	ENSMUST00000129753.8	1799	11	12896	8036	37	-7749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCCGGTATGGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	121718747	121716414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121716486_121717666_121717808_121718676
ENSMUSG00000029455.15_121717668_121731463_1	chr5	-	284	3	ISM	ENSMUSG00000029455.15	ENSMUST00000129753.8	1799	11	180	9289	180	-9002	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGTCCTCAGTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	121731463	121717667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121717808_121718676_121718782_121731424
ENSMUSG00000029455.15_121717721_121731519_1	chr5	-	287	3	ISM	ENSMUSG00000029455.15	ENSMUST00000129753.8	1799	11	124	9342	124	-9055	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGTTGTACCGATTGGC	NA	NA	NA	NA	NA	NA	NA	NA	121731519	121717720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121717808_121718676_121718782_121731424
ENSMUSG00000029458.15_121798881_121813340_1	chr5	+	741	6	ISM	ENSMUSG00000029458.15	ENST00000419234.9	2917	13	220	11984	-51	-11968	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTGGAGCGGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	121798880	121813340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121798912_121800062_121800225_121801358_121801555_121803161_121803352_121810147_121810262_121813292
ENSMUSG00000029458.15_121798881_121813444_1	chr5	+	845	6	ISM	ENSMUSG00000029458.15	ENST00000419234.9	2917	13	220	11880	-51	-11864	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCAGGGGCTGCCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	121798880	121813444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121798912_121800062_121800225_121801358_121801555_121803161_121803352_121810147_121810262_121813292
ENSMUSG00000029458.15_121800104_121813444_1	chr5	+	773	5	ISM	ENSMUSG00000029458.15	ENSMUST00000111765.8	3861	12	1172	11864	1172	-11864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCAGGGGCTGCCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	121800103	121813444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121800225_121801358_121801555_121803161_121803352_121810147_121810262_121813292
ENSMUSG00000029458.15_121800143_121817315_1	chr5	+	849	7	ISM	ENSMUSG00000029458.15	ENSMUST00000111765.8	3861	12	1211	7993	1211	-7993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTACGTGAGTCGGCATGC	NA	NA	NA	NA	NA	NA	NA	NA	121800142	121817315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121800225_121801358_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273
ENSMUSG00000029458.15_121801409_121817892_1	chr5	+	827	7	ISM	ENSMUSG00000029458.15	ENSMUST00000111765.8	3861	12	2477	7416	2477	-7416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGACTGGTTGCAAGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	121801408	121817892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879
ENSMUSG00000029458.15_121801518_121824876_1	chr5	+	2694	10	ISM	ENSMUSG00000029458.15	ENSMUST00000111765.8	3861	12	2586	432	2586	-432	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGATCCTCCGGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	121801517	121824876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
ENSMUSG00000029458.15_121803199_121822448_1	chr5	+	846	8	ISM	ENSMUSG00000029458.15	ENSMUST00000111765.8	3861	12	4267	2860	4267	-2860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGTTTAAAGAGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	121803198	121822448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433
ENSMUSG00000029458.15_121810207_121823264_1	chr5	+	796	8	ISM	ENSMUSG00000029458.15	ENSMUST00000111765.8	3861	12	11275	2044	11275	-2044	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGCGCCAACCAGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	121810206	121823264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
ENSMUSG00000029458.15_121816827_121823539_1	chr5	+	867	6	ISM	ENSMUSG00000029458.15	ENSMUST00000111765.8	3861	12	17895	1769	17895	-1769	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGGGCAAGTGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	121816826	121823539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
ENSMUSG00000029458.15_121817349_121824388_1	chr5	+	768	6	ISM	ENSMUSG00000029458.15	ENST00000419234.9	2917	13	18688	936	18417	-920	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGATCGTTTCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	121817348	121824388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191_121823539_121824335
ENSMUSG00000029458.15_121817969_121824522_1	chr5	+	749	5	ISM	ENSMUSG00000029458.15	ENST00000419234.9	2917	13	19308	802	19037	-786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTAACAGATTAATTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	121817968	121824522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121817990_121820842_121820933_121822433_121822538_121823191_121823539_121824335
ENSMUSG00000029458.15_121822454_121824690_1	chr5	+	786	3	ISM	ENSMUSG00000029458.15	ENST00000419234.9	2917	13	23793	634	23522	-618	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGACTGACTGGACCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	121822453	121824690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121822538_121823191_121823539_121824335
ENSMUSG00000029458.15_121822519_121824726_1	chr5	+	757	3	ISM	ENSMUSG00000029458.15	ENST00000419234.9	2917	13	23858	598	23587	-582	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACATGTCACCACGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	121822518	121824726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121822538_121823191_121823539_121824335
ENSMUSG00000029458.15_121823192_121824837_1	chr5	+	849	2	ISM	ENSMUSG00000029458.15	ENST00000419234.9	2917	13	24531	487	24260	-471	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACCTCTGTAGCCGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	121823191	121824837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121823539_121824335
ENSMUSG00000029462.19_122492432_122529684_1	chr5	+	2770	5	NNC	ENSMUSG00000029462.19	novel	2716	4	NA	NA	0	26637	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGACATAGCAGAAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	122492431	122529684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867_122503054_122529636
ENSMUSG00000029463.6_122502818_122505483_1	chr5	-	321	3	ISM	ENSMUSG00000029463.6	ENSMUST00000031419.6	1388	7	4944	175	4944	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTGCACAGGGAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	122505483	122502817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122502983_122504376_122504460_122505410
ENSMUSG00000029463.6_122502884_122505532_1	chr5	-	304	3	ISM	ENSMUSG00000029463.6	ENSMUST00000031419.6	1388	7	4895	241	4895	-241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCACGCCAGCCTGACG	NA	NA	NA	NA	NA	NA	NA	NA	122505532	122502883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122502983_122504376_122504460_122505410
ENSMUSG00000029463.6_122502929_122505681_1	chr5	-	329	4	ISM	ENSMUSG00000029463.6	ENSMUST00000031419.6	1388	7	4746	286	4746	-286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAATAAGTGCATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	122505681	122502928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122502983_122504376_122504460_122505410_122505583_122505661
ENSMUSG00000029463.6_122505516_122508592_1	chr5	-	334	4	ISM	ENSMUSG00000029463.6	ENSMUST00000031419.6	1388	7	1835	2873	1835	-2873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGGAGACACCATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	122508592	122505515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122505583_122505661_122505792_122507579_122507702_122508577
ENSMUSG00000029463.6_122505661_122509965_1	chr5	-	332	4	ISM	ENSMUSG00000029463.6	ENSMUST00000031419.6	1388	7	462	3018	462	-3018	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTACCTCCATCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	122509965	122505660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122505792_122507579_122507702_122508577_122508637_122509945
ENSMUSG00000029463.6_122505719_122510016_1	chr5	-	325	4	ISM	ENSMUSG00000029463.6	ENSMUST00000031419.6	1388	7	411	3076	411	-3076	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCTTGATGAAGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	122510016	122505718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122505792_122507579_122507702_122508577_122508637_122509945
ENSMUSG00000029463.6_122505774_122510063_1	chr5	-	317	4	ISM	ENSMUSG00000029463.6	ENSMUST00000031419.6	1388	7	364	3131	364	-3131	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGAAGCGTTACCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	122510063	122505773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122505792_122507579_122507702_122508577_122508637_122509945
ENSMUSG00000029463.6_122507672_122510176_1	chr5	-	320	3	ISM	ENSMUSG00000029463.6	ENSMUST00000031419.6	1388	7	251	5029	251	-5029	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACATTGCCAAACTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	122510176	122507671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122507702_122508577_122508637_122509945
ENSMUSG00000029464.11_122512048_122519491_1	chr5	+	475	5	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	1534	1474	1534	-1474	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGATTCAACCGGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	122512047	122519491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460
ENSMUSG00000029464.11_122516547_122520157_1	chr5	+	536	5	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	6033	808	6033	-808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGGAGAGCATGAACATCG	NA	NA	NA	NA	NA	NA	NA	NA	122516546	122520157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110
ENSMUSG00000029464.11_122516630_122520180_1	chr5	+	476	5	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	6116	785	6116	-785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCACATCGACTTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	122516629	122520180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110
ENSMUSG00000029464.11_122516678_122520239_1	chr5	+	487	5	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	6164	726	6164	-726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTGGGCTTCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	122516677	122520239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110
ENSMUSG00000029464.11_122518104_122520391_1	chr5	+	475	5	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	7590	574	7590	-574	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACGTAGGAAGCCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	122518103	122520391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122518169_122519252_122519369_122519460_122519558_122520110_122520240_122520323
ENSMUSG00000029464.11_122518142_122520473_1	chr5	+	519	5	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	7628	492	7628	-492	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCGTGCTGGGCTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	122518141	122520473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122518169_122519252_122519369_122519460_122519558_122520110_122520240_122520323
ENSMUSG00000029464.11_122519331_122520595_1	chr5	+	536	4	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	8817	370	8817	-370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATTTAAAGAAAATCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	122519330	122520595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122519369_122519460_122519558_122520110_122520240_122520323
ENSMUSG00000029464.11_122520159_122520714_1	chr5	+	472	2	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	9645	251	9645	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAACCTCATTTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	122520158	122520714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122520240_122520323
ENSMUSG00000029464.11_122520210_122520766_1	chr5	+	473	2	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	9696	199	9696	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTACTTGTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	122520209	122520766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122520240_122520323
ENSMUSG00000029465.15_122530029_122542219_1	chr5	+	311	5	ISM	ENSMUSG00000029465.15	ENSMUST00000102525.11	899	7	88	2023	88	-1907	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACGCTAGGAATCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	122530028	122542219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122530061_122534879_122534980_122539709_122539787_122541421_122541491_122542186
ENSMUSG00000029465.15_122534930_122542313_1	chr5	+	323	4	ISM	ENSMUSG00000029465.15	ENSMUST00000031421.12	736	7	1053	1813	1053	-1813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAACAAGACTGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	122534929	122542313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122534980_122539709_122539787_122541421_122541491_122542186
ENSMUSG00000029465.15_122541477_122543951_1	chr5	+	256	4	ISM	ENSMUSG00000029465.15	ENSMUST00000111713.2	708	6	3016	249	3016	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACAGTTCATGAACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	122541476	122543951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122541491_122542186_122542314_122543146_122543242_122543931
ENSMUSG00000029465.15_122542280_122544126_1	chr5	+	324	3	ISM	ENSMUSG00000029465.15	ENSMUST00000111713.2	708	6	3819	74	3819	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTGGGTGTCGGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	122542279	122544126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122542314_122543146_122543242_122543931
ENSMUSG00000029466.12_122560678_122578207_1	chr5	+	1154	9	ISM	ENSMUSG00000029466.12	ENSMUST00000119792.2	3599	10	134	3290	134	-3290	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTTACAAAACTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	122560677	122578207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148
ENSMUSG00000029466.12_122566325_122579405_1	chr5	+	1178	9	ISM	ENSMUSG00000029466.12	ENSMUST00000119792.2	3599	10	5781	2092	5781	-2092	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGAGTGACTGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	122566324	122579405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352
ENSMUSG00000029466.12_122570840_122581954_1	chr5	+	1152	8	ISM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	10333	1021	10296	457	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGACGACATGGAGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	122570839	122581954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
ENSMUSG00000029466.12_122571551_122582144_1	chr5	+	1162	7	ISM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	11044	831	11007	647	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCGGGACTGGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	122571550	122582144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
ENSMUSG00000029466.12_122573679_122582291_1	chr5	+	1162	6	ISM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	13172	684	13135	-684	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGGCACATGCACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	122573678	122582291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
ENSMUSG00000029466.12_122576287_122582426_1	chr5	+	1156	5	ISM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	15780	549	15743	-549	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCCCCAGTGGGCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	122576286	122582426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
ENSMUSG00000029466.12_122577437_122582585_1	chr5	+	1237	4	ISM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	16930	390	16893	-390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACTGTCTTCTCCCATG	NA	NA	NA	NA	NA	NA	NA	NA	122577436	122582585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122577579_122578148_122578374_122579352_122579504_122581866
ENSMUSG00000029466.12_122578202_122582716_1	chr5	+	1173	3	ISM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	17695	259	17658	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCGTCCTGCATCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	122578201	122582716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122578374_122579352_122579504_122581866
ENSMUSG00000029466.12_122578202_122582790_1	chr5	+	1247	3	ISM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	17695	185	17658	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTCATTGTGAATAATC	NA	NA	NA	NA	NA	NA	NA	NA	122578201	122582790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122578374_122579352_122579504_122581866
ENSMUSG00000029466.12_122579438_122582975_1	chr5	+	1175	2	ISM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	18931	0	18894	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACCAGTGTGAGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	122579437	122582975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122579504_122581866
ENSMUSG00000029467.16_122594514_122640237_2	chr5	-	4324	20	FSM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	51	111	51	-111	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTAAATGTCTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	122640237	122594513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ENSMUSG00000029469.15_122688700_122710777_1	chr5	-	1152	8	ISM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	41804	433	41804	-433	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCGCTACAGTTTCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	122710777	122688699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702
ENSMUSG00000029469.15_122688828_122729191_1	chr5	-	1148	9	ISM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	23390	561	23390	-561	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGAACCACGTAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	122729191	122688827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142
ENSMUSG00000029469.15_122688976_122731191_1	chr5	-	1177	10	ISM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	21390	709	21390	-709	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAAGTGAAGGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	122731191	122688975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112
ENSMUSG00000029469.15_122689102_122732674_1	chr5	-	1155	11	ISM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	19907	835	19907	-835	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGGCTGGTTCTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	122732674	122689101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587
ENSMUSG00000029469.15_122697244_122740407_1	chr5	-	1157	11	ISM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	12174	8977	12174	-8977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCAAGAGAAGAGGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	122740407	122697243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330
ENSMUSG00000029469.15_122706978_122747416_1	chr5	-	1215	10	ISM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	5165	18711	5165	-18711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTAATGGAGCCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	122747416	122706977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235
ENSMUSG00000029469.15_122710703_122748244_1	chr5	-	1194	10	ISM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	4337	22436	4337	-22436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATACAGCCTCATGTATT	NA	NA	NA	NA	NA	NA	NA	NA	122748244	122710702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140
ENSMUSG00000029470.16_122845607_122867149_1	chr5	+	2050	12	FSM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	0	652	0	42	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTACATTATTAAAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	122845606	122867149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
ENSMUSG00000029470.16_122845717_122867149_1	chr5	+	1940	12	FSM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	110	652	0	42	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTACATTATTAAAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	122845716	122867149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
ENSMUSG00000029470.16_122852461_122867361_1	chr5	+	2019	11	ISM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	6854	440	6744	254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAAGTCCTCTTCTTACC	NA	NA	NA	NA	NA	NA	NA	NA	122852460	122867361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
ENSMUSG00000029470.16_122852556_122867480_1	chr5	+	2043	11	ISM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	6949	321	6839	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAAAGAGACTCCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	122852555	122867480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
ENSMUSG00000029470.16_122857225_122867801_1	chr5	+	2133	8	ISM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	11618	0	11508	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGGGCTGTTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	122857224	122867801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
ENSMUSG00000029471.14_122869233_122917344_1	chr5	-	4760	17	FSM	ENSMUSG00000029471.14	ENSMUST00000111668.8	4861	17	101	0	44	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGGGCCTCTCGGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	122917344	122869232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_122872309_122875050_122875094_122875495_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
ENSMUSG00000029471.14_122894339_122902189_1	chr5	-	834	4	ISM	ENSMUSG00000029471.14	ENSMUST00000196742.2	1084	5	15199	0	15199	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGTTAGCAGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	122902189	122894338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122894718_122895622_122895677_122897015_122897064_122901836
ENSMUSG00000029471.14_122894473_122902316_1	chr5	-	827	4	ISM	ENSMUSG00000029471.14	ENSMUST00000196742.2	1084	5	15072	134	15072	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGGCACTTGCGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	122902316	122894472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122894718_122895622_122895677_122897015_122897064_122901836
ENSMUSG00000029472.14_122925522_122929785_1	chr5	-	838	3	ISM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	29617	0	29558	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCATCCTCTTAAATC	NA	NA	NA	NA	NA	NA	NA	NA	122929785	122925521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122926082_122926364_122926528_122929670
ENSMUSG00000029472.14_122925784_122931621_1	chr5	-	839	5	ISM	ENSMUSG00000029472.14	ENSMUST00000197074.5	2413	17	27722	-2	27722	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGTTTTTTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	122931621	122925783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499
ENSMUSG00000029472.14_122925978_122937466_1	chr5	-	785	7	ISM	ENSMUSG00000029472.14	ENSMUST00000197074.5	2413	17	21877	192	21877	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACGCTCTTGGCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	122937466	122925977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401
ENSMUSG00000029472.14_122926478_122938695_1	chr5	-	821	7	ISM	ENSMUSG00000029472.14	ENSMUST00000197074.5	2413	17	20648	692	20648	-684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGCCCATCCTAGCCGACG	NA	NA	NA	NA	NA	NA	NA	NA	122938695	122926477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513
ENSMUSG00000029472.14_122929671_122940282_1	chr5	-	861	7	ISM	ENSMUSG00000029472.14	ENSMUST00000196640.5	2422	17	19068	3887	19061	-3877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCAATGTGGGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	122940282	122929670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192
ENSMUSG00000029472.14_122929928_122944414_1	chr5	-	864	8	ISM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	14929	4138	14929	-4134	internal_fragment	TRUE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGTCAGAAGCTAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	122944414	122929927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307
ENSMUSG00000029472.14_122931514_122944434_1	chr5	-	800	7	ISM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	14909	5724	14909	-5720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTGTATACAGGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	122944434	122931513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307
ENSMUSG00000029472.14_122932480_122945464_1	chr5	-	858	7	ISM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	13879	6690	13879	-6686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTGCCTTTCTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	122945464	122932479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362
ENSMUSG00000029472.14_122937458_122952678_1	chr5	-	794	7	ISM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	6665	11668	6665	-11664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGAGTCCTTTGCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	122952678	122937457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611
ENSMUSG00000029472.14_122938546_122956003_1	chr5	-	802	7	ISM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	3340	12756	3340	-12752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGGCCATCTGGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	122956003	122938545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883
ENSMUSG00000029472.14_122940193_122957026_1	chr5	-	826	7	ISM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	2317	14403	2317	-14399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTCATCTTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	122957026	122940192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916
ENSMUSG00000029472.14_122940886_122957750_1	chr5	-	816	7	ISM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	1593	15096	1593	-15092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCCGTCCTCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	122957750	122940885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670
ENSMUSG00000029472.14_122944308_122959081_1	chr5	-	773	7	ISM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	262	18518	262	-18514	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGATAACTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	122959081	122944307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUSG00000029472.14_122945392_122959333_1	chr5	-	805	6	ISM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	10	19602	10	-19598	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTTAATCCTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	122959333	122945391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUSG00000029474.8_122988111_123006538_1	chr5	+	1624	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	0	2816	0	-2816	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTCAGTGTGGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	122988110	123006538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
ENSMUSG00000029474.8_122988220_123006668_1	chr5	+	1645	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	109	2686	109	-2686	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCTGAATGTTCACTCG	NA	NA	NA	NA	NA	NA	NA	NA	122988219	123006668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
ENSMUSG00000029474.8_122999848_123006821_1	chr5	+	1560	5	ISM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	11737	2533	11737	-2533	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTTTTGTTCAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	122999847	123006821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
ENSMUSG00000029474.8_122999898_123006877_1	chr5	+	1566	5	ISM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	11787	2477	11787	-2477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGAAGTATATGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	122999897	123006877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
ENSMUSG00000029474.8_123002088_123006990_1	chr5	+	1568	4	ISM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	13977	2364	13977	-2364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAAATGAAAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	123002087	123006990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_123002458_123004864_123004970_123005182_123005385_123006099
ENSMUSG00000029474.8_123002401_123007294_1	chr5	+	1559	4	ISM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	14290	2060	14290	-2060	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCTGGCTGGCCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	123002400	123007294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_123002458_123004864_123004970_123005182_123005385_123006099
ENSMUSG00000029474.8_123005330_123007627_1	chr5	+	1583	2	ISM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	17219	1727	17219	-1727	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTAAAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	123005329	123007627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_123005385_123006099
ENSMUSG00000029482.5_125553127_125590265_1	chr5	+	1437	14	ISM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	249	4209	249	-4209	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCTTACTTCTCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	125553126	125590265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165
ENSMUSG00000029482.5_125561676_125592058_1	chr5	+	1433	15	ISM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	8798	2416	8798	-2416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTCCTGTTCCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	125561675	125592058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991
ENSMUSG00000029482.5_125572021_125593419_1	chr5	+	1499	14	ISM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	19143	1055	19143	-1055	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTCGCACTCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	125572020	125593419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ENSMUSG00000029482.5_125583213_125593564_1	chr5	+	1399	11	ISM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	30335	910	30335	-910	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCCGAGCTCCAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	125583212	125593564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ENSMUSG00000029482.5_125583213_125593624_1	chr5	+	1459	11	ISM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	30335	850	30335	-850	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGCCCTGCTGCTATAG	NA	NA	NA	NA	NA	NA	NA	NA	125583212	125593624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ENSMUSG00000029482.5_125583337_125593671_1	chr5	+	1382	11	ISM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	30459	803	30459	-803	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGACATTTGGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	125583336	125593671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ENSMUSG00000029482.5_125589002_125594061_1	chr5	+	1385	7	ISM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	36124	413	36124	-413	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTAATTGAGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	125589001	125594061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ENSMUSG00000029482.5_125590203_125594263_1	chr5	+	1405	5	ISM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	37325	211	37325	-211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGGCTTTGGCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	125590202	125594263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ENSMUSG00000029482.5_125591261_125594474_1	chr5	+	1429	3	ISM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	38383	0	38383	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTACGCGTGTGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	125591260	125594474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125591292_125591991_125592195_125593279
ENSMUSG00000029484.13_96941198_96993541_1	chr5	+	1357	13	FSM	ENSMUSG00000029484.13	ENSMUST00000031447.12	1595	13	-46	284	-46	-178	multi-exon	FALSE	canonical	NA	NA	NA	NA	2387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGCATCGTTCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	96941197	96993541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_96941423_96945259_96945313_96958908_96958997_96960700_96960796_96964199_96964314_96968260_96968352_96972745_96972826_96976206_96976264_96976555_96976650_96978251_96978348_96982633_96982693_96986151_96986275_96993359
ENSMUSG00000029484.13_96941300_96993541_1	chr5	+	1255	13	FSM	ENSMUSG00000029484.13	ENSMUST00000031447.12	1595	13	56	284	56	-178	multi-exon	FALSE	canonical	NA	NA	NA	NA	2250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGCATCGTTCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	96941299	96993541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_96941423_96945259_96945313_96958908_96958997_96960700_96960796_96964199_96964314_96968260_96968352_96972745_96972826_96976206_96976264_96976555_96976650_96978251_96978348_96982633_96982693_96986151_96986275_96993359
ENSMUSG00000029484.13_96941300_96993719_1	chr5	+	1433	13	FSM	ENSMUSG00000029484.13	ENSMUST00000031447.12	1595	13	56	106	56	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCCTTTCCTAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	96941299	96993719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_96941423_96945259_96945313_96958908_96958997_96960700_96960796_96964199_96964314_96968260_96968352_96972745_96972826_96976206_96976264_96976555_96976650_96978251_96978348_96982633_96982693_96986151_96986275_96993359
ENSMUSG00000029484.13_96945259_96993825_1	chr5	+	1417	12	ISM	ENSMUSG00000029484.13	ENSMUST00000031447.12	1595	13	4015	0	3896	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGCTTCTGTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	96945258	96993825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_96945313_96958908_96958997_96960700_96960796_96964199_96964314_96968260_96968352_96972745_96972826_96976206_96976264_96976555_96976650_96978251_96978348_96982633_96982693_96986151_96986275_96993359
ENSMUSG00000029490.5_108590031_108592676_1	chr5	-	766	6	NNC	ENSMUSG00000029490.5	novel	933	7	NA	NA	1285	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATCCTCTTCACCCACGA	NA	NA	NA	NA	NA	NA	NA	NA	108592676	108590030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_108590128_108590889_108591000_108591312_108591463_108591720_108591874_108592336_108592454_108592537
ENSMUSG00000029490.5_108590101_108593858_1	chr5	-	760	7	FSM	ENSMUSG00000029490.5	ENST00000515118.5	933	7	103	70	103	-70	multi-exon	FALSE	canonical	NA	NA	NA	NA	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCCTTTTCACCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	108593858	108590100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_108590128_108590889_108591000_108591304_108591463_108591720_108591874_108592336_108592454_108592537_108592676_108593801
ENSMUSG00000029490.5_108590890_108593922_1	chr5	-	796	6	NNC	ENSMUSG00000029490.5	novel	933	7	NA	NA	39	-859	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTCTGTGCCTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	108593922	108590889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_108591000_108591304_108591463_108591720_108591874_108592336_108592454_108592537_108592676_108593802
ENSMUSG00000029499.12_110422148_110425555_1	chr5	-	382	2	ISM	ENSMUSG00000029499.12	ENST00000537262.1	296	3	6063	-278	6063	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTTCTCAGCACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	110425555	110422147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_110422495_110425520
ENSMUSG00000029499.12_110422426_110431619_1	chr5	-	297	3	FSM	ENSMUSG00000029499.12	ENST00000537262.1	296	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGATACACCGCGGATG	NA	NA	NA	NA	NA	NA	NA	NA	110431619	110422425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_110422495_110425520_110425641_110431511
ENSMUSG00000029499.12_110425521_110431619_1	chr5	-	391	3	ISM	ENSMUSG00000029499.12	ENSMUST00000031472.12	1041	5	2433	3373	-1	-3095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACTTGCTTGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	110431619	110425520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_110425641_110429062_110429226_110431511
ENSMUSG00000029500.17_110406996_110417753_2	chr5	-	2067	6	NNC	ENSMUSG00000029500.17	novel	2098	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1015	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGTTTAGAAACCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	110417753	110406995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_110408304_110413377_110413512_110413605_110413695_110413776_110413903_110414952_110415127_110417517
ENSMUSG00000029503.17_110488059_110490821_1	chr5	-	1242	9	FSM	ENSMUSG00000029503.17	ENST00000352418.8	1242	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1554	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATCCTCACTAAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	110490821	110488058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_110488449_110488533_110488600_110488721_110488816_110488966_110489098_110489416_110489556_110489639_110489721_110489870_110489968_110490365_110490502_110490713
ENSMUSG00000029507.17_110921655_110928222_1	chr5	-	1452	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	240	122	240	-121	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGAATCAGCTGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	110928222	110921654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928105
ENSMUSG00000029507.17_110921737_110928316_1	chr5	-	1464	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	146	204	146	-203	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGACGGGGGGGAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	110928316	110921736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928105
ENSMUSG00000029507.17_110921798_110928462_1	chr5	-	1549	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	0	265	0	-264	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTAGATCCTGCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	110928462	110921797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928105
ENSMUSG00000029512.12_110938219_110940874_1	chr5	-	681	7	ISM	ENSMUSG00000029512.12	ENSMUST00000031490.11	5213	28	17089	5865	17045	-4259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCTTTAGCCCACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	110940874	110938218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831
ENSMUSG00000029513.15_116151649_116158493_1	chr5	-	1516	5	ISM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	4028	4	4028	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTTGACTCGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	116158493	116151648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432
ENSMUSG00000029513.15_116151815_116159705_1	chr5	-	1547	6	ISM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	2816	170	2816	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGCTGTGCCCATTGGG	NA	NA	NA	NA	NA	NA	NA	NA	116159705	116151814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541
ENSMUSG00000029513.15_116151881_116159705_1	chr5	-	1481	6	ISM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	2816	236	2816	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTTTCCAGCAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	116159705	116151880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541
ENSMUSG00000029513.15_116152006_116162222_1	chr5	-	1429	7	FSM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	299	361	299	-357	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCTCCTTTTAGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	116162222	116152005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149
ENSMUSG00000029513.15_116152059_116162278_1	chr5	-	1432	7	FSM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	243	414	243	-410	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCAGTTGCAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	116162278	116152058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149
ENSMUSG00000029513.15_116152226_116162456_1	chr5	-	1338	8	FSM	ENSMUSG00000029513.15	ENSMUST00000111999.8	2026	8	111	577	65	-577	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGGCCACTCCTACGT	NA	NA	NA	NA	NA	NA	NA	NA	116162456	116152225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149_116162319_116162423
ENSMUSG00000029513.15_116152226_116162567_1	chr5	-	1449	8	FSM	ENSMUSG00000029513.15	ENSMUST00000111999.8	2026	8	0	577	0	-577	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGGCCACTCCTACGT	NA	NA	NA	NA	NA	NA	NA	NA	116162567	116152225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149_116162319_116162423
ENSMUSG00000029516.20_115989300_116011954_1	chr5	+	375	4	ISM	ENSMUSG00000029516.20	ENST00000612548.4	1663	11	91	132972	91	-132433	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATACGAGGACCAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	115989299	116011954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115989353_115997256_115997433_116001016_116001119_116011910
ENSMUSG00000029516.20_115997364_116014003_1	chr5	+	370	4	ISM	ENSMUSG00000029516.20	ENST00000612548.4	1663	11	8155	130923	8155	-130384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGATCAGCCGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	115997363	116014003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115997433_116001016_116001119_116011910_116012054_116013947
ENSMUSG00000029516.20_116001061_116022995_1	chr5	+	363	4	ISM	ENSMUSG00000029516.20	ENST00000612548.4	1663	11	11852	121931	11852	-121392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAAGGGGCACATACGGCT	NA	NA	NA	NA	NA	NA	NA	NA	116001060	116022995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116001119_116011910_116012054_116013947_116014039_116022924
ENSMUSG00000029516.20_116012006_116024769_1	chr5	+	400	4	ISM	ENSMUSG00000029516.20	ENST00000612548.4	1663	11	22797	120157	22797	-119618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTCTGCTGTGTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	116012005	116024769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116012054_116013947_116014039_116022924_116023129_116024712
ENSMUSG00000029516.20_116022984_116046800_1	chr5	+	403	3	ISM	ENSMUSG00000029516.20	ENST00000612548.4	1663	11	33775	98126	-22571	-97587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCGGGCTTCTCAGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	116022983	116046800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116023129_116024712_116024867_116046696
ENSMUSG00000029516.20_116024806_116064542_1	chr5	+	376	4	ISM	ENSMUSG00000029516.20	ENST00000612548.4	1663	11	35597	80384	-20749	-79845	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGCAGAGTGTCAGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	116024805	116064542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116024867_116046696_116046881_116063452_116063559_116064517
ENSMUSG00000029516.20_116046697_116144624_1	chr5	+	347	4	ISM	ENSMUSG00000029516.20	ENST00000612548.4	1663	11	57488	302	91	212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCGCTGACAGAGCTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	116046696	116144624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116046881_116063452_116063559_116064517_116064560_116144609
ENSMUSG00000029516.20_116046744_116144681_1	chr5	+	357	4	ISM	ENSMUSG00000029516.20	ENST00000612548.4	1663	11	57535	245	138	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCATCTCTGCACTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	116046743	116144681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116046881_116063452_116063559_116064517_116064560_116144609
ENSMUSG00000029516.20_116046826_116076796_1	chr5	+	901	9	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	220	70170	220	-67591	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGACTGAAGGATGACA	NA	NA	NA	NA	NA	NA	NA	NA	116046825	116076796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737
ENSMUSG00000029516.20_116065891_116084991_1	chr5	+	983	9	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	19285	61975	19285	-59396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACATGTAAGCATGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	116065890	116084991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888
ENSMUSG00000029516.20_116071498_116086026_1	chr5	+	886	9	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	24892	60940	24892	-58361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGGAAAGCTGGAGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	116071497	116086026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965
ENSMUSG00000029516.20_116071602_116086140_1	chr5	+	896	9	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	24996	60826	24996	-58247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGGAGGGTCGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	116071601	116086140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965
ENSMUSG00000029516.20_116076736_116105979_1	chr5	+	911	8	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	30130	40987	30130	-38408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACCGAGGACAACGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	116076735	116105979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946
ENSMUSG00000029516.20_116076790_116106026_1	chr5	+	904	8	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	30184	40940	30184	-38361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAACTCGATGAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	116076789	116106026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946
ENSMUSG00000029516.20_116079895_116106144_1	chr5	+	949	7	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	33289	40822	33289	-38243	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGGGCAGGCCGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	116079894	116106144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946
ENSMUSG00000029516.20_116083874_116107107_1	chr5	+	907	7	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	37268	39859	37268	-37280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCGCCAGTGGGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	116083873	116107107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022
ENSMUSG00000029516.20_116083924_116107164_1	chr5	+	914	7	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	37318	39802	37318	-37223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCGAGTTCGAGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	116083923	116107164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022
ENSMUSG00000029516.20_116106084_116120194_1	chr5	+	916	8	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	59478	26772	59478	-24193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGCAGATCGCCATGTC	NA	NA	NA	NA	NA	NA	NA	NA	116106083	116120194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141
ENSMUSG00000029516.20_116107152_116122911_1	chr5	+	899	8	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	60546	24055	60546	-21476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAACATGAGAGCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	116107151	116122911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850
ENSMUSG00000029516.20_116109378_116123522_1	chr5	+	894	8	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	62772	23444	62772	-20865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCTGAATATGCCACACA	NA	NA	NA	NA	NA	NA	NA	NA	116109377	116123522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463
ENSMUSG00000029516.20_116111785_116123644_1	chr5	+	958	7	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	65179	23322	65179	-20743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCCTGCAGGGTGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	116111784	116123644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463
ENSMUSG00000029516.20_116119752_116126593_1	chr5	+	976	8	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	73146	20373	73146	-17794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGCCTAGCATGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	116119751	116126593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123860_116125050_116125123_116126214_116126296_116126456
ENSMUSG00000029516.20_116123522_116132368_1	chr5	+	934	9	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	76916	14598	76916	-12019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCGAGAAGAATACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	116123521	116132368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116123645_116123777_116123860_116125050_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270
ENSMUSG00000029516.20_116126542_116143866_1	chr5	+	888	9	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	79936	3100	79936	-521	internal_fragment	TRUE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAACGAGCACATCACC	NA	NA	NA	NA	NA	NA	NA	NA	116126541	116143866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732_116135913_116143840
ENSMUSG00000029516.20_116128419_116143969_1	chr5	+	908	8	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	81813	2997	81813	-418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGTCGGACAGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	116128418	116143969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732_116135913_116143840
ENSMUSG00000029516.20_116130668_116144159_1	chr5	+	992	7	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	84062	2807	84062	-228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTCAGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	116130667	116144159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732_116135913_116143840
ENSMUSG00000029516.20_116132307_116144525_1	chr5	+	905	6	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	85701	2441	85701	113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGCCAGGCCCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	116132306	116144525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116132400_116133451_116133533_116135550_116135630_116135732_116135913_116143840_116144151_116144363
ENSMUSG00000029516.20_116135550_116144724_1	chr5	+	931	4	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	88944	2242	88944	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTACTTAGCTCCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	116135549	116144724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116135630_116135732_116135913_116143840_116144151_116144363
ENSMUSG00000029516.20_116143901_116145009_1	chr5	+	896	2	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	97295	1957	97295	83	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGTTGGCTAACCTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	116143900	116145009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_116144151_116144363
ENSMUSG00000029521.8_110989320_111015960_1	chr5	+	960	10	FSM	ENSMUSG00000029521.8	ENST00000403642.5	1079	10	119	0	119	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTACGAGGCAGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	110989319	111015960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_110989410_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873
ENSMUSG00000029521.8_111014137_111015960_1	chr5	+	325	3	NNC	ENSMUSG00000029521.8	novel	342	3	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTACGAGGCAGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	111014136	111015960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_111014293_111014837_111014920_111015873
ENSMUSG00000029521.8_111014137_111015960_2	chr5	+	331	3	FSM	ENSMUSG00000029521.8	ENST00000554701.2	336	3	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTACGAGGCAGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	111014136	111015960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_111014293_111014831_111014920_111015873
ENSMUSG00000029524.17_115616069_115617875_1	chr5	-	614	2	ISM	ENSMUSG00000029524.17	ENSMUST00000112067.8	1645	5	4481	0	4481	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTGTGGACTGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	115617875	115616068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115616468_115617660
ENSMUSG00000029524.17_115616258_115618442_1	chr5	-	574	3	ISM	ENSMUSG00000029524.17	ENSMUST00000112067.8	1645	5	3914	189	3914	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAACTGTCTATGAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	115618442	115616257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115616468_115617660_115617872_115618289
ENSMUSG00000029524.17_115616370_115618538_1	chr5	-	558	3	ISM	ENSMUSG00000029524.17	ENSMUST00000112067.8	1645	5	3818	301	3818	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGAGCTGCCCCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	115618538	115616369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115616468_115617660_115617872_115618289
ENSMUSG00000029524.17_115616427_115618584_1	chr5	-	547	3	ISM	ENSMUSG00000029524.17	ENSMUST00000112067.8	1645	5	3772	358	3772	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCCTAGAGGTGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	115618584	115616426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115616468_115617660_115617872_115618289
ENSMUSG00000029524.17_115617789_115620915_1	chr5	-	611	3	ISM	ENSMUSG00000029524.17	ENSMUST00000112067.8	1645	5	1441	1720	1441	-1720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGATTTGGCTTGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	115620915	115617788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115617872_115618289_115618585_115620682
ENSMUSG00000029524.17_115618434_115621094_1	chr5	-	563	2	ISM	ENSMUSG00000029524.17	ENSMUST00000112067.8	1645	5	1262	2365	1262	-2365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCGTGCTGTGATCGATG	NA	NA	NA	NA	NA	NA	NA	NA	115621094	115618433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115618585_115620682
ENSMUSG00000029524.17_115620685_115622470_1	chr5	-	573	2	ISM	ENSMUSG00000029524.17	ENSMUST00000112066.2	1794	5	314	4616	-114	-4616	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCAGAAGTCTGCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	115622470	115620684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115621178_115622390
ENSMUSG00000029524.17_115620809_115622622_1	chr5	-	601	2	ISM	ENSMUSG00000029524.17	ENSMUST00000112066.2	1794	5	162	4740	162	-4740	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGGGCTCTGAGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	115622622	115620808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115621178_115622390
ENSMUSG00000029528.20_115682458_115693292_1	chr5	+	2703	10	ISM	ENSMUSG00000029528.20	ENSMUST00000202564.2	2126	11	314	-732	314	255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTTTTGGCGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	115682457	115693292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ENSMUSG00000029528.20_115682535_115693372_1	chr5	+	2706	10	ISM	ENSMUSG00000029528.20	ENSMUST00000202564.2	2126	11	391	-812	391	335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGGAAAGCCGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	115682534	115693372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ENSMUSG00000029528.20_115683490_115693658_1	chr5	+	2723	8	ISM	ENSMUSG00000029528.20	ENSMUST00000202564.2	2126	11	1346	-1098	1346	-388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGCTTGGAAATGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	115683489	115693658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ENSMUSG00000029528.20_115683766_115693850_1	chr5	+	2734	7	ISM	ENSMUSG00000029528.20	ENSMUST00000202564.2	2126	11	1622	-1290	1622	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTCTGTTTACAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	115683765	115693850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ENSMUSG00000029528.20_115684932_115694046_1	chr5	+	2771	6	ISM	ENSMUSG00000029528.20	ENSMUST00000202564.2	2126	11	2788	-1486	2788	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTTATTTCTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	115684931	115694046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ENSMUSG00000029534.18_17694166_17943024_1	chr6	+	2024	16	FSM	ENSMUSG00000029534.18	ENSMUST00000115419.8	2194	16	173	-3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCGTCTTCTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	17694165	17943024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17850355_17850425_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922124_17930764_17930858_17934117_17934258_17942668
ENSMUSG00000029538.15_115465454_115470752_1	chr5	+	557	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	218	387	218	-387	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTCTCCTTTCAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	115465453	115470752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
ENSMUSG00000029538.15_115468637_115470869_1	chr5	+	489	3	ISM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	3401	270	3401	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTTTTTTTCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	115468636	115470869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115468718_115470175_115470349_115470634
ENSMUSG00000029538.15_115470174_115471081_1	chr5	+	622	2	ISM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	4938	58	4938	-58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGATGGGGCCCGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	115470173	115471081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115470349_115470634
ENSMUSG00000029545.14_115248358_115251200_1	chr5	-	1512	8	ISM	ENSMUSG00000029545.14	ENSMUST00000031524.11	1870	10	6205	0	4589	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCTGTGTCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	115251200	115248357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122
ENSMUSG00000029545.14_115248552_115255705_1	chr5	-	1472	9	ISM	ENSMUSG00000029545.14	ENSMUST00000031524.11	1870	10	1700	194	84	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGACAGGGGTCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	115255705	115248551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623
ENSMUSG00000029545.14_115248660_115257334_1	chr5	-	1497	10	FSM	ENSMUSG00000029545.14	ENSMUST00000031524.11	1870	10	71	302	71	249	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCACCAACAGTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	115257334	115248659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
ENSMUSG00000029545.14_115248727_115257340_1	chr5	-	1436	10	FSM	ENSMUSG00000029545.14	ENSMUST00000031524.11	1870	10	65	369	65	182	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGTGACCTGCAACCGA	NA	NA	NA	NA	NA	NA	NA	NA	115257340	115248726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
ENSMUSG00000029545.14_115248909_115255730_1	chr5	-	1076	8	NNC	ENSMUSG00000029545.14	novel	1141	8	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCGGGGACTTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	115255730	115248908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250171_115250813_115250936_115251122_115251267_115255623
ENSMUSG00000029545.14_115248909_115255730_2	chr5	-	1079	8	NNC	ENSMUSG00000029545.14	novel	1141	8	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCGGGGACTTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	115255730	115248908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250178_115250823_115250936_115251122_115251273_115255623
ENSMUSG00000029545.14_115248909_115255730_3	chr5	-	1076	8	NNC	ENSMUSG00000029545.14	novel	1141	8	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCGGGGACTTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	115255730	115248908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_115249066_115249152_115249210_115249377_115249468_115249695_115249834_115249915_115250171_115250813_115250936_115251122_115251273_115255623
ENSMUSG00000029545.14_115248909_115255730_4	chr5	-	1082	8	FSM	ENSMUSG00000029545.14	ENST00000411593.2	1141	8	59	0	59	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCGGGGACTTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	115255730	115248908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250171_115250813_115250936_115251122_115251273_115255623
ENSMUSG00000029552.20_17065167_17105827_1	chr6	+	2421	7	NNC	ENSMUSG00000029552.20	novel	2685	9	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTTCTATGTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	17065166	17105827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_17065313_17086135_17086222_17096126_17096380_17097264_17097590_17099702_17099919_17100280_17100440_17104591
ENSMUSG00000029553.11_16835133_16845389_1	chr6	-	376	4	FSM	ENSMUSG00000029553.11	ENST00000393485.5	1730	4	88	1266	88	-1266	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTCATTCATACATTG	NA	NA	NA	NA	NA	NA	NA	NA	16845389	16835132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_16835349_16840467_16840544_16844193_16844251_16845362
ENSMUSG00000029553.11_16835209_16845422_1	chr6	-	333	4	FSM	ENSMUSG00000029553.11	ENST00000393485.5	1730	4	55	1342	55	-1342	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTCAGGTTGTTATGCGA	NA	NA	NA	NA	NA	NA	NA	NA	16845422	16835208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_16835349_16840467_16840544_16844193_16844251_16845362
ENSMUSG00000029553.11_16835259_16845477_1	chr6	-	338	4	FSM	ENSMUSG00000029553.11	ENST00000393485.5	1730	4	0	1392	0	-1392	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAACACAGACAGAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	16845477	16835258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_16835349_16840467_16840544_16844193_16844251_16845362
ENSMUSG00000029554.16_139994444_140103080_1	chr5	-	1165	5	ISM	ENSMUSG00000029554.16	ENST00000265854.12	1940	14	193413	-436	193413	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCCAAGGCTCCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	140103080	139994443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991
ENSMUSG00000029554.16_139994677_140129778_1	chr5	-	1093	7	ISM	ENSMUSG00000029554.16	ENST00000265854.12	1940	14	166715	-203	166715	203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTTGTCCCTGGCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	140129778	139994676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674
ENSMUSG00000029554.16_139994880_140247339_1	chr5	-	1159	9	ISM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	59968	436	49154	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATCTAGCCTCTTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	140247339	139994879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252
ENSMUSG00000029554.16_140051617_140286043_1	chr5	-	1097	10	ISM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	21264	57173	10450	-56737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCTCCCGATACGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	140286043	140051616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969
ENSMUSG00000029554.16_140051684_140179747_1	chr5	-	741	7	ISM	ENSMUSG00000029554.16	ENST00000265854.12	1940	14	116746	56804	116746	-56804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCGCAAAGTTTGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	140179747	140051683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668
ENSMUSG00000029554.16_140051722_140286238_1	chr5	-	1083	11	ISM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	21069	57278	10255	-56842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGGCTGAAGGAGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	140286238	140051721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188
ENSMUSG00000029554.16_140074426_140179955_1	chr5	-	832	6	ISM	ENSMUSG00000029554.16	ENST00000265854.12	1940	14	116538	79546	116538	-79546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCTGCCTCCAGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	140179955	140074425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668
ENSMUSG00000029554.16_140074426_140288751_1	chr5	-	1167	11	ISM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	18556	79982	7742	-79546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCTGCCTCCAGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	140288751	140074425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669
ENSMUSG00000029554.16_140091269_140289452_1	chr5	-	1126	11	ISM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	17855	96825	7041	-96389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTTGGTGGCCAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	140289452	140091268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327
ENSMUSG00000029554.16_140091316_140286225_1	chr5	-	720	7	ISM	ENSMUSG00000029554.16	ENST00000265854.12	1940	14	10268	96436	10268	-96436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGCAGGTGCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	140286225	140091315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179956_140185328_140185369_140286164
ENSMUSG00000029554.16_140102990_140286321_1	chr5	-	775	6	NNC	ENSMUSG00000029554.16	novel	1940	14	NA	NA	10172	-108110	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTCCTTTTGACCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	140286321	140102989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_140103081_140118523_140118581_140129674_140129816_140179668_140179956_140185328_140185364_140286157
ENSMUSG00000029554.16_140102990_140286321_2	chr5	-	780	6	NNC	ENSMUSG00000029554.16	novel	1940	14	NA	NA	10172	-108110	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTCCTTTTGACCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	140286321	140102989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_140103081_140118523_140118581_140129674_140129816_140179668_140179956_140185328_140185369_140286157
ENSMUSG00000029554.16_140103017_140293443_1	chr5	-	1107	11	ISM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	13864	108573	3050	-108137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGAGGAGGTGGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	140293443	140103016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345
ENSMUSG00000029554.16_140103057_140288710_1	chr5	-	745	7	ISM	ENSMUSG00000029554.16	ENST00000265854.12	1940	14	7783	108177	7783	-108177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCCCAGACAAGCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	140288710	140103056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140103081_140118523_140118581_140129674_140129816_140179668_140179956_140185328_140185369_140286164_140286320_140288669
ENSMUSG00000029554.16_140118524_140288752_1	chr5	-	765	6	NNC	ENSMUSG00000029554.16	novel	1940	14	NA	NA	7741	-123644	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACTGAGGTGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	140288752	140118523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_140118581_140129674_140129816_140179668_140179956_140185328_140185364_140286157_140286320_140288669
ENSMUSG00000029554.16_140129667_140289454_2	chr5	-	840	6	ISM	ENSMUSG00000029554.16	ENST00000265854.12	1940	14	7039	134787	7039	-134787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCATGGGCAAGTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	140289454	140129666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140129816_140179668_140179956_140185328_140185369_140286164_140286320_140288669_140288752_140289327
ENSMUSG00000029554.16_140129667_140296409_1	chr5	-	1136	10	ISM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	10898	135223	84	-134787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCATGGGCAAGTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	140296409	140129666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349
ENSMUSG00000029554.16_140179680_140300778_1	chr5	-	1091	10	ISM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	6529	185236	-4285	-184800	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGACCAAGGTACAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	140300778	140179679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744
ENSMUSG00000029554.16_140179724_140293527_1	chr5	-	816	6	ISM	ENSMUSG00000029554.16	ENST00000265854.12	1940	14	2966	184844	2966	-184844	internal_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACATGAGGCACTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	140293527	140179723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140179956_140185328_140185369_140286164_140286320_140288669_140288752_140289327_140289453_140293345
ENSMUSG00000029554.16_140179733_140300835_1	chr5	-	1095	10	ISM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	6472	185289	-4342	-184853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGGGAGACACATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	140300835	140179732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744
ENSMUSG00000029554.16_140179789_140300891_1	chr5	-	1095	10	ISM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	6416	185345	-4398	-184909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGCTCCAGGATGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	140300891	140179788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744
ENSMUSG00000029554.16_140179838_140296365_1	chr5	-	716	7	ISM	ENSMUSG00000029554.16	ENST00000265854.12	1940	14	128	184958	128	-184958	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCATCTTCCCTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	140296365	140179837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140179956_140185328_140185369_140286164_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349
ENSMUSG00000029554.16_140179885_140296422_1	chr5	-	726	7	ISM	ENSMUSG00000029554.16	ENST00000265854.12	1940	14	71	185005	71	-185005	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGTGGCCTTAGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	140296422	140179884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140179956_140185328_140185369_140286164_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349
ENSMUSG00000029554.16_140179885_140296437_1	chr5	-	743	7	NNC	ENSMUSG00000029554.16	novel	1940	14	NA	NA	56	-185005	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGTGGCCTTAGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	140296437	140179884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_140179956_140185328_140185364_140286157_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349
ENSMUSG00000029556.13_115088014_115091409_1	chr5	-	798	4	ISM	ENSMUSG00000029556.13	ENST00000541395.5	2102	9	17517	-1	17508	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACCTGACACAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	115091409	115088013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115088245_115088752_115089104_115090637_115090830_115091385
ENSMUSG00000029556.13_115088120_115090671_1	chr5	-	448	4	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	18246	91	18246	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGTGACTGCCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	115090671	115088119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115088245_115088752_115088923_115088984_115089104_115090637
ENSMUSG00000029556.13_115088120_115090719_1	chr5	-	496	4	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	18198	91	18198	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGTGACTGCCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	115090719	115088119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115088245_115088752_115088923_115088984_115089104_115090637
ENSMUSG00000029556.13_115088120_115090776_1	chr5	-	553	4	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	18141	91	18141	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGTGACTGCCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	115090776	115088119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115088245_115088752_115088923_115088984_115089104_115090637
ENSMUSG00000029556.13_115088120_115091480_1	chr5	-	763	4	ISM	ENSMUSG00000029556.13	ENST00000541395.5	2102	9	17446	105	17437	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGTGACTGCCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	115091480	115088119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115088245_115088752_115089104_115090637_115090830_115091385
ENSMUSG00000029556.13_115088120_115091559_1	chr5	-	842	4	ISM	ENSMUSG00000029556.13	ENST00000541395.5	2102	9	17367	105	17358	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGTGACTGCCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	115091559	115088119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115088245_115088752_115089104_115090637_115090830_115091385
ENSMUSG00000029556.13_115088230_115091774_1	chr5	-	837	5	ISM	ENSMUSG00000029556.13	ENST00000541395.5	2102	9	17152	215	17143	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTGTATCAGAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	115091774	115088229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115088245_115088752_115089104_115090637_115090830_115091385_115091588_115091697
ENSMUSG00000029556.13_115088773_115091408_1	chr5	-	484	4	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	17509	744	17509	-744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGCACCAGTCCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	115091408	115088772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115088923_115088984_115089104_115090637_115090830_115091385
ENSMUSG00000029556.13_115088823_115091465_1	chr5	-	491	4	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	17452	794	17452	-794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCAGCCAGGACCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	115091465	115088822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115088923_115088984_115089104_115090637_115090830_115091385
ENSMUSG00000029556.13_115088882_115091509_1	chr5	-	476	4	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	17408	853	17408	-853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGCCTCCAGTGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	115091509	115088881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115088923_115088984_115089104_115090637_115090830_115091385
ENSMUSG00000029556.13_115088985_115093550_1	chr5	-	904	5	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	15367	956	15367	-956	internal_fragment	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCCCTGCCTCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	115093550	115088984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115089104_115090637_115090830_115091385_115091588_115091697_115091847_115093308
ENSMUSG00000029556.13_115090638_115093920_1	chr5	-	831	5	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	14997	2609	14997	-2609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATCCCCCACGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	115093920	115090637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874
ENSMUSG00000029556.13_115090638_115093968_1	chr5	-	879	5	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	14949	2609	14949	-2609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATCCCCCACGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	115093968	115090637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874
ENSMUSG00000029556.13_115090745_115094020_1	chr5	-	824	5	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	14897	2716	14897	-2716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCACTGCATCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	115094020	115090744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874
ENSMUSG00000029556.13_115091486_115098216_1	chr5	-	822	5	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	10701	3457	10701	-3457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGGCCTCGCTACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	115098216	115091485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115091588_115091697_115091847_115093308_115093551_115093874_115094062_115098074
ENSMUSG00000029556.13_115091702_115108612_1	chr5	-	809	5	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	305	3673	305	-3673	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGAGTGAGCAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	115108612	115091701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115108577
ENSMUSG00000029556.13_115091768_115108662_1	chr5	-	793	5	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	255	3739	255	-3739	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCTTACACCAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	115108662	115091767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115108577
ENSMUSG00000029556.13_115091810_115108721_1	chr5	-	810	5	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	196	3781	196	-3781	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGTGCCCTCCAGCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	115108721	115091809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115108577
ENSMUSG00000029556.13_115093405_115108903_1	chr5	-	859	4	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	14	5376	14	-5376	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGACCTCCACCGGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	115108903	115093404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115093551_115093874_115094062_115098074_115098275_115108577
ENSMUSG00000029557.8_140313822_140316825_1	chr5	-	805	2	ISM	ENSMUSG00000029557.8	ENSMUST00000031536.8	1443	3	828	393	828	-393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTACTGTTAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	140316825	140313821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140314536_140316734
ENSMUSG00000029557.8_140313937_140316890_1	chr5	-	755	2	ISM	ENSMUSG00000029557.8	ENSMUST00000031536.8	1443	3	763	508	763	-508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAGGAAAGGGGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	140316890	140313936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140314536_140316734
ENSMUSG00000029557.8_140314017_140316980_1	chr5	-	765	2	ISM	ENSMUSG00000029557.8	ENSMUST00000031536.8	1443	3	673	588	673	-588	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCACCTCTGCTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	140316980	140314016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140314536_140316734
ENSMUSG00000029559.16_115080290_115087151_1	chr5	+	1843	6	FSM	ENSMUSG00000029559.16	ENSMUST00000031538.9	2607	6	73	691	73	-691	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGCCCGAGGAGACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	115080289	115087151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349_115084424_115085221_115085313_115085740
ENSMUSG00000029559.16_115080290_115087208_1	chr5	+	1900	6	FSM	ENSMUSG00000029559.16	ENSMUST00000031538.9	2607	6	73	634	73	-634	multi-exon	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTCAGAATGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	115080289	115087208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349_115084424_115085221_115085313_115085740
ENSMUSG00000029559.16_115085296_115087556_1	chr5	+	1833	2	ISM	ENSMUSG00000029559.16	ENSMUST00000031538.9	2607	6	5079	286	5079	-286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTAGGAGAGCCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	115085295	115087556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115085313_115085740
ENSMUSG00000029560.13_140326058_140343929_1	chr5	-	2321	9	ISM	ENSMUSG00000029560.13	ENSMUST00000196130.5	2547	10	2241	2	2241	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGGTTTCCACGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	140343929	140326057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811
ENSMUSG00000029560.13_140326214_140346137_1	chr5	-	2350	10	NNC	ENSMUSG00000029560.13	novel	2627	11	NA	NA	33	-156	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTAGCCACCCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	140346137	140326213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332095_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946
ENSMUSG00000029560.13_140326327_140374996_1	chr5	-	2337	11	FSM	ENSMUSG00000029560.13	ENSMUST00000031539.12	2627	11	21	269	21	-269	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGTCCCTTTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	140374996	140326326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
ENSMUSG00000029563.17_15185505_15438303_1	chr6	+	2677	17	NNC	ENSMUSG00000029563.17	novel	2687	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTCTTGGGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	15185504	15438303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_15185817_15196949_15197128_15286679_15286770_15376687_15376826_15377958_15378088_15379651_15379827_15394638_15394853_15396737_15396843_15403815_15403904_15405557_15405642_15409739_15409942_15411024_15411102_15411240_15411343_15413800_15413922_15415033_15415104_15415868_15416033_15437875
ENSMUSG00000029563.17_15185505_15438303_2	chr6	+	2674	17	NNC	ENSMUSG00000029563.17	novel	2687	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTCTTGGGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	15185504	15438303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_15185821_15196957_15197128_15286679_15286770_15376687_15376826_15377958_15378088_15379651_15379827_15394638_15394853_15396737_15396843_15403815_15403904_15405557_15405642_15409739_15409942_15411024_15411102_15411240_15411343_15413799_15413922_15415033_15415104_15415868_15416033_15437875
ENSMUSG00000029563.17_15185505_15438303_3	chr6	+	2675	17	NNC	ENSMUSG00000029563.17	novel	2687	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTCTTGGGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	15185504	15438303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_15185817_15196949_15197128_15286679_15286770_15376687_15376826_15377961_15378088_15379651_15379827_15394638_15394853_15396737_15396843_15403815_15403904_15405557_15405642_15409739_15409942_15411024_15411102_15411240_15411343_15413799_15413922_15415033_15415104_15415868_15416033_15437875
ENSMUSG00000029563.17_15185505_15438303_4	chr6	+	2676	17	NNC	ENSMUSG00000029563.17	novel	2687	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTCTTGGGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	15185504	15438303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_15185817_15196949_15197128_15286679_15286770_15376687_15376826_15377958_15378088_15379651_15379827_15394638_15394853_15396737_15396843_15403815_15403904_15405557_15405642_15409739_15409942_15411024_15411102_15411240_15411343_15413799_15413922_15415033_15415104_15415868_15416033_15437877
ENSMUSG00000029563.17_15185505_15438303_5	chr6	+	2669	17	NNC	ENSMUSG00000029563.17	novel	2687	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTCTTGGGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	15185504	15438303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_15185817_15196949_15197128_15286688_15286770_15376687_15376826_15377958_15378088_15379651_15379827_15394638_15394853_15396737_15396843_15403815_15403904_15405557_15405642_15409739_15409942_15411024_15411102_15411240_15411343_15413799_15413922_15415033_15415104_15415868_15416033_15437875
ENSMUSG00000029563.17_15185505_15438303_6	chr6	+	2677	17	NNC	ENSMUSG00000029563.17	novel	2687	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTCTTGGGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	15185504	15438303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_15185817_15196949_15197128_15286679_15286770_15376687_15376826_15377958_15378088_15379651_15379827_15394638_15394853_15396737_15396843_15403815_15403904_15405558_15405642_15409739_15409942_15411024_15411102_15411240_15411343_15413799_15413922_15415033_15415104_15415868_15416033_15437875
ENSMUSG00000029563.17_15185505_15438303_7	chr6	+	2678	17	FSM	ENSMUSG00000029563.17	ENST00000393498.6	2613	17	-3	-62	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTCTTGGGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	15185504	15438303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_15185817_15196949_15197128_15286679_15286770_15376687_15376826_15377958_15378088_15379651_15379827_15394638_15394853_15396737_15396843_15403815_15403904_15405557_15405642_15409739_15409942_15411024_15411102_15411240_15411343_15413799_15413922_15415033_15415104_15415868_15416033_15437875
ENSMUSG00000029563.17_15185505_15438303_8	chr6	+	2672	17	NNC	ENSMUSG00000029563.17	novel	2687	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTCTTGGGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	15185504	15438303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_15185817_15196949_15197128_15286679_15286770_15376687_15376826_15377958_15378088_15379657_15379827_15394638_15394853_15396737_15396843_15403815_15403904_15405557_15405642_15409739_15409942_15411024_15411102_15411240_15411343_15413799_15413922_15415033_15415104_15415868_15416033_15437875
ENSMUSG00000029563.17_15185505_15438303_9	chr6	+	2677	17	NNC	ENSMUSG00000029563.17	novel	2687	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTCTTGGGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	15185504	15438303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_15185817_15196949_15197128_15286679_15286770_15376687_15376816_15377949_15378088_15379651_15379827_15394638_15394853_15396737_15396843_15403815_15403904_15405557_15405642_15409739_15409942_15411024_15411102_15411240_15411343_15413799_15413922_15415033_15415104_15415868_15416033_15437875
ENSMUSG00000029570.6_140576182_140601124_1	chr5	+	1676	8	FSM	ENSMUSG00000029570.6	ENST00000402506.5	1851	8	1	174	1	-174	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACCCCCACCACCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	140576181	140601124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_140576228_140597578_140597654_140598045_140598146_140598257_140598412_140598514_140598601_140598910_140599077_140599945_140600032_140600161
ENSMUSG00000029570.6_140593075_140601111_1	chr5	+	2116	8	FSM	ENSMUSG00000029570.6	ENSMUST00000031555.3	2305	8	0	189	0	-187	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAGACTTACCTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	140593074	140601111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_140593600_140597604_140597654_140598045_140598146_140598257_140598412_140598514_140598601_140598910_140599077_140599945_140600032_140600161
ENSMUSG00000029570.6_140593325_140601300_1	chr5	+	2055	8	FSM	ENSMUSG00000029570.6	ENSMUST00000031555.3	2305	8	250	0	250	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGGGGCCCTAGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	140593324	140601300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_140593600_140597604_140597654_140598045_140598146_140598257_140598412_140598514_140598601_140598910_140599077_140599945_140600032_140600161
ENSMUSG00000029571.15_13069850_13084609_1	chr6	+	1331	9	FSM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	12	4659	12	-4659	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATACAATAAATAATTATATA	NA	NA	NA	NA	NA	NA	NA	NA	13069849	13084609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_13069960_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
ENSMUSG00000029571.15_13075051_13085025_1	chr6	+	1292	6	ISM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	5213	4243	5213	-4243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTACAATATTGTAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	13075050	13085025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
ENSMUSG00000029571.15_13081573_13085247_1	chr6	+	1272	4	ISM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	11735	4021	11735	-4021	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGATGCTTTTCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	13081572	13085247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_13081680_13082411_13082462_13083367_13083422_13084186
ENSMUSG00000029571.15_13081621_13085320_1	chr6	+	1297	4	ISM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	11783	3948	11783	-3948	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATTAGTCAAGGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	13081620	13085320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_13081680_13082411_13082462_13083367_13083422_13084186
ENSMUSG00000029575.18_114572880_114574604_1	chr5	-	584	2	ISM	ENSMUSG00000029575.18	ENSMUST00000123256.3	1277	8	7449	191	7431	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCCTGGGTTACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	114574604	114572879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_114573399_114574539
ENSMUSG00000029576.18_142470634_142529265_1	chr5	-	3034	14	FSM	ENSMUSG00000029576.18	ENST00000399583.4	3549	14	487	28	487	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGTTTAGATTCAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	142529265	142470633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_142471004_142471167_142471308_142471609_142471733_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159
ENSMUSG00000029576.18_142470634_142529350_1	chr5	-	3119	14	FSM	ENSMUSG00000029576.18	ENST00000399583.4	3549	14	402	28	402	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGTTTAGATTCAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	142529350	142470633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_142471004_142471167_142471308_142471609_142471733_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159
ENSMUSG00000029576.18_142470857_142529492_1	chr5	-	3038	14	FSM	ENSMUSG00000029576.18	ENST00000399583.4	3549	14	260	251	260	-223	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTCCAGGTGCCACCAAC	NA	NA	NA	NA	NA	NA	NA	NA	142529492	142470856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_142471004_142471167_142471308_142471609_142471733_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159
ENSMUSG00000029576.18_142471167_142529613_1	chr5	-	3013	13	ISM	ENSMUSG00000029576.18	ENST00000399583.4	3549	14	139	561	139	-533	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGCCACACCTGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	142529613	142471166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_142471308_142471609_142471733_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159
ENSMUSG00000029576.18_142471226_142529657_1	chr5	-	2998	13	ISM	ENSMUSG00000029576.18	ENST00000399583.4	3549	14	95	620	95	-592	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGGAGACCAAATCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	142529657	142471225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_142471308_142471609_142471733_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159
ENSMUSG00000029576.18_142471254_142529731_1	chr5	-	3044	13	ISM	ENSMUSG00000029576.18	ENST00000399583.4	3549	14	21	648	21	-620	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCGGCATCTGATGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	142529731	142471253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_142471308_142471609_142471733_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159
ENSMUSG00000029577.14_114522390_114527189_1	chr5	+	504	5	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	3148	30540	3148	-30540	internal_fragment	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCTGTGGCACTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	114522389	114527189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125
ENSMUSG00000029577.14_114525243_114530220_1	chr5	+	542	6	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	6001	27509	6001	-27509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGACTTTACTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	114525242	114530220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158
ENSMUSG00000029577.14_114525493_114531212_1	chr5	+	493	6	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	6251	26517	6251	-26517	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGCGGTAAGAAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	114525492	114531212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137
ENSMUSG00000029577.14_114526817_114536574_1	chr5	+	504	6	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	7575	21155	7575	-21155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTTGCAGTTCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	114526816	114536574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468
ENSMUSG00000029577.14_114527159_114536911_1	chr5	+	533	6	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	7917	20818	7917	-20818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGAAGGCTGCCATACCC	NA	NA	NA	NA	NA	NA	NA	NA	114527158	114536911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822
ENSMUSG00000029577.14_114528493_114537920_1	chr5	+	521	6	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	9251	19809	9251	-19809	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACGCAGATGCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	114528492	114537920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850
ENSMUSG00000029577.14_114531162_114539370_1	chr5	+	506	5	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	11920	18359	11920	-18359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGGCGGTGCCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	114531161	114539370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328
ENSMUSG00000029577.14_114537904_114542655_1	chr5	+	518	4	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	18662	15074	18662	-15074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCCCACGGCGGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	114537903	114542655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114538029_114539328_114539499_114540582_114540751_114542600
ENSMUSG00000029577.14_114537963_114542714_1	chr5	+	518	4	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	18721	15015	18721	-15015	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCAGCTCCTGGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	114537962	114542714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114538029_114539328_114539499_114540582_114540751_114542600
ENSMUSG00000029577.14_114539328_114544257_1	chr5	+	536	4	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	20086	13472	20086	-13472	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAACAGATCTCCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	114539327	114544257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114539499_114540582_114540751_114542600_114542773_114544232
ENSMUSG00000029577.14_114539387_114544318_1	chr5	+	538	4	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	20145	13411	20145	-13411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTTTAAGATGATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	114539386	114544318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114539499_114540582_114540751_114542600_114542773_114544232
ENSMUSG00000029577.14_114539462_114544351_1	chr5	+	496	4	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	20220	13378	20220	-13378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTGACCATTCCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	114539461	114544351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114539499_114540582_114540751_114542600_114542773_114544232
ENSMUSG00000029577.14_114540689_114545649_1	chr5	+	513	5	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	21447	12080	21447	-12080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGGGCTCAGCTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	114540688	114545649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604
ENSMUSG00000029577.14_114542675_114546241_1	chr5	+	516	5	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	23433	11488	23433	-11488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACATCACCATCCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	114542674	114546241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157
ENSMUSG00000029577.14_114544834_114549397_1	chr5	+	518	5	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	25592	8332	25592	-8332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACGTCCTACATTCACGA	NA	NA	NA	NA	NA	NA	NA	NA	114544833	114549397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364
ENSMUSG00000029577.14_114545646_114550305_1	chr5	+	546	5	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	26404	7424	26404	-7424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGATGAGCTTCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	114545645	114550305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226
ENSMUSG00000029577.14_114549169_114553343_1	chr5	+	543	6	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	29927	4386	29927	-4386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTCCATCATCAAGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	114549168	114553343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262
ENSMUSG00000029577.14_114550310_114556645_1	chr5	+	522	6	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	31068	1084	31068	-1084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTCCGTTCTCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	114550309	114556645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598
ENSMUSG00000029577.14_114550926_114557633_1	chr5	+	528	5	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	31684	96	31684	-96	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGCTTAAGCTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	114550925	114557633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ENSMUSG00000029578.16_142615452_142644010_1	chr5	+	453	4	ISM	ENSMUSG00000029578.16	ENSMUST00000110778.2	1959	12	104	9232	104	-9232	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCATCCGAGAGACACCC	NA	NA	NA	NA	NA	NA	NA	NA	142615451	142644010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946
ENSMUSG00000029578.16_142641706_142648826_1	chr5	+	463	6	ISM	ENSMUSG00000029578.16	ENSMUST00000110778.2	1959	12	26358	4416	26358	-4416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATGTTCCTCTCCGCATC	NA	NA	NA	NA	NA	NA	NA	NA	142641705	142648826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789
ENSMUSG00000029578.16_142644009_142650125_1	chr5	+	451	6	ISM	ENSMUSG00000029578.16	ENSMUST00000110778.2	1959	12	28661	3117	28661	-3117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGGCATCTACCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	142644008	142650125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079
ENSMUSG00000029578.16_142648818_142651955_1	chr5	+	460	4	ISM	ENSMUSG00000029578.16	ENSMUST00000110778.2	1959	12	33470	1287	33470	-1287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTCGTCCCCCACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	142648817	142651955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_142648898_142650079_142650245_142651177_142651286_142651848
ENSMUSG00000029578.16_142651947_142653012_1	chr5	+	458	2	ISM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	36650	3331	36599	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGGAGTCTCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	142651946	142653012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_142652007_142652614
ENSMUSG00000029581.15_142946131_142956440_1	chr5	+	1352	4	ISM	ENSMUSG00000029581.15	ENSMUST00000031565.15	2675	5	33	2500	0	-2498	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTTCACTGGGTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	142946130	142956440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272
ENSMUSG00000029581.15_142946598_142958141_1	chr5	+	1376	5	FSM	ENSMUSG00000029581.15	ENSMUST00000031565.15	2675	5	500	799	467	-797	multi-exon	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCAGGAAGTGGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	142946597	142958141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957650
ENSMUSG00000029581.15_142955700_142958548_1	chr5	+	1305	4	ISM	ENSMUSG00000029581.15	ENSMUST00000198017.5	2157	6	9569	390	9569	-390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGGCCCTAGGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	142955699	142958548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_142955817_142955921_142956044_142956272_142956441_142957650
ENSMUSG00000029581.15_142955840_142958721_1	chr5	+	1443	3	ISM	ENSMUSG00000029581.15	ENSMUST00000198017.5	2157	6	9709	217	9709	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGGCGGGAGAAAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	142955839	142958721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_142956044_142956272_142956441_142957650
ENSMUSG00000029591.15_114269290_114276681_1	chr5	+	1132	6	FSM	ENSMUSG00000029591.15	ENSMUST00000102584.11	2136	6	303	701	303	-698	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACCAGCGGACACACCC	NA	NA	NA	NA	NA	NA	NA	NA	114269289	114276681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
ENSMUSG00000029591.15_114270273_114276971_1	chr5	+	1106	5	FSM	ENSMUSG00000029591.15	ENSMUST00000112275.8	1733	5	219	408	219	-408	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCACAGTGGCCGCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	114270272	114276971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
ENSMUSG00000029591.15_114273925_114277086_1	chr5	+	1156	4	ISM	ENSMUSG00000029591.15	ENSMUST00000112275.8	1733	5	3871	293	3871	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCGGTGGAGTTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	114273924	114277086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114274023_114274407_114274497_114275213_114275393_114276296
ENSMUSG00000029591.15_114275288_114277384_1	chr5	+	1193	2	ISM	ENSMUSG00000029591.15	ENSMUST00000112275.8	1733	5	5234	-5	5234	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCCGACTATTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	114275287	114277384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114275393_114276296
ENSMUSG00000029591.15_114275360_114277384_1	chr5	+	1121	2	ISM	ENSMUSG00000029591.15	ENSMUST00000112275.8	1733	5	5306	-5	5306	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCCGACTATTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	114275359	114277384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_114275393_114276296
ENSMUSG00000029594.13_120258231_120261088_1	chr5	+	267	2	ISM	ENSMUSG00000029594.13	ENST00000392561.7	2841	23	1507	74964	1507	-74964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAACTGTGAAGAAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	120258230	120261088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_120258367_120260957
ENSMUSG00000029594.13_120258290_120261141_1	chr5	+	261	2	ISM	ENSMUSG00000029594.13	ENST00000392561.7	2841	23	1566	74911	1566	-74911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGCCAAGCAAGGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	120258289	120261141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_120258367_120260957
ENSMUSG00000029594.13_120258307_120336034_1	chr5	+	2334	20	ISM	ENSMUSG00000029594.13	ENST00000392561.7	2841	23	1583	18	1583	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	952	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTGAGCTGGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	120258306	120336034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271958_120278274_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120335946
ENSMUSG00000029596.14_120596267_120600135_1	chr5	-	886	5	ISM	ENSMUSG00000029596.14	ENSMUST00000052258.14	1225	8	10693	16	10693	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGTGGCTCCCTGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	120600135	120596266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120596617_120597509_120597635_120597820_120598049_120598671_120598761_120600041
ENSMUSG00000029596.14_120596446_120601189_1	chr5	-	886	7	ISM	ENSMUSG00000029596.14	ENSMUST00000052258.14	1225	8	9639	195	9639	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCAGCTGGGCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	120601189	120596445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120596617_120597509_120597635_120597820_120598049_120598671_120598761_120600041_120600182_120600910_120600951_120601096
ENSMUSG00000029596.14_120596533_120601206_1	chr5	-	816	7	ISM	ENSMUSG00000029596.14	ENSMUST00000052258.14	1225	8	9622	282	9622	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCCGCCTGAGTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	120601206	120596532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120596617_120597509_120597635_120597820_120598049_120598671_120598761_120600041_120600182_120600910_120600951_120601096
ENSMUSG00000029596.14_120597840_120605482_1	chr5	-	816	6	ISM	ENSMUSG00000029596.14	ENSMUST00000031594.13	1476	9	5393	1573	5346	-1573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCCAGACATCACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	120605482	120597839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120598049_120598671_120598761_120600041_120600182_120600910_120600951_120601096_120601291_120605338
ENSMUSG00000029596.14_120597898_120605530_1	chr5	-	806	6	ISM	ENSMUSG00000029596.14	ENSMUST00000031594.13	1476	9	5345	1631	5298	-1631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGACCCGCGGGGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	120605530	120597897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120598049_120598671_120598761_120600041_120600182_120600910_120600951_120601096_120601291_120605338
ENSMUSG00000029598.13_120622814_120624186_1	chr5	-	1172	2	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	17504	1467	17504	-1467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTATTGTATCTGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	120624186	120622813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120623904_120624104
ENSMUSG00000029598.13_120623037_120625506_1	chr5	-	1195	4	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	16184	1690	16184	-1690	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCACCCTACCGTC	NA	NA	NA	NA	NA	NA	NA	NA	120625506	120623036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494
ENSMUSG00000029598.13_120623154_120625752_1	chr5	-	1154	5	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	15938	1807	15938	-1807	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGGGCGGCACCACAC	NA	NA	NA	NA	NA	NA	NA	NA	120625752	120623153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736
ENSMUSG00000029598.13_120623188_120625832_1	chr5	-	1200	5	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	15858	1841	15858	-1841	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGAAGCCCAGGCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120625832	120623187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736
ENSMUSG00000029598.13_120623312_120629211_1	chr5	-	1258	7	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	12479	1965	12479	-1965	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGGGCCTTGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	120629211	120623311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190
ENSMUSG00000029598.13_120623464_120629268_1	chr5	-	1163	7	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	12422	2117	12422	-2117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAGCATATGTGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	120629268	120623463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190
ENSMUSG00000029598.13_120623568_120630798_1	chr5	-	1148	8	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	10892	2221	10892	-2221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTCATGGCTCATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	120630798	120623567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729
ENSMUSG00000029598.13_120623619_120630856_1	chr5	-	1155	8	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	10834	2272	10834	-2272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGACACAACCCAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	120630856	120623618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729
ENSMUSG00000029598.13_120623674_120630914_1	chr5	-	1158	8	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	10776	2327	10776	-2327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCACCCCTCGGGCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	120630914	120623673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729
ENSMUSG00000029598.13_120623853_120632481_1	chr5	-	1149	10	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	9209	2506	9209	-2506	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGTGGGACCAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	120632481	120623852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442
ENSMUSG00000029598.13_120624103_120632601_1	chr5	-	1220	9	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	9089	2756	9089	-2756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCCACCTAAGCCAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	120632601	120624102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442
ENSMUSG00000029598.13_120624214_120637102_1	chr5	-	1150	10	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	4588	2867	4588	-2867	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAATGCGGAGAATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	120637102	120624213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061
ENSMUSG00000029598.13_120624737_120641375_1	chr5	-	1149	10	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	315	3390	315	-3390	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGCCATGGTCCGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	120641375	120624736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ENSMUSG00000029598.13_120624791_120641431_1	chr5	-	1151	10	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	259	3444	259	-3444	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACCCTCGAGCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	120641431	120624790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ENSMUSG00000029598.13_120624840_120641483_1	chr5	-	1154	10	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	207	3493	207	-3493	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTGCAGGCCCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	120641483	120624839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ENSMUSG00000029598.13_120625736_120641666_1	chr5	-	1240	8	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	24	4389	24	-4389	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCCCTGGGGCAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	120641666	120625735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ENSMUSG00000029599.14_120750914_120766657_1	chr5	+	4212	20	FSM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	110	0	110	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTATTCCTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	120750913	120766657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ENSMUSG00000029599.14_120750914_120766657_2	chr5	+	4206	20	NNC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	110	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTATTCCTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	120750913	120766657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761642_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ENSMUSG00000029599.14_120750914_120766657_3	chr5	+	4206	20	NNC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	110	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTATTCCTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	120750913	120766657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763996_120764105_120764465_120764571_120764898_120765015_120765124
ENSMUSG00000029599.14_120750999_120766657_1	chr5	+	4127	20	FSM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	195	0	195	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTATTCCTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	120750998	120766657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ENSMUSG00000029600.11_120747377_120749702_1	chr5	-	911	2	ISM	ENSMUSG00000029600.11	ENSMUST00000031599.9	1573	3	952	254	702	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCCCAGCCTTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	120749702	120747376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120748028_120749442
ENSMUSG00000029600.11_120747483_120749702_1	chr5	-	805	2	ISM	ENSMUSG00000029600.11	ENSMUST00000031599.9	1573	3	952	360	702	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCCTATAGAGACAACGGT	NA	NA	NA	NA	NA	NA	NA	NA	120749702	120747482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120748028_120749442
ENSMUSG00000029600.11_120747796_120750642_1	chr5	-	888	3	FSM	ENSMUSG00000029600.11	ENSMUST00000031599.9	1573	3	12	673	12	-673	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGGATGGGTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	120750642	120747795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_120748028_120749442_120749795_120750338
ENSMUSG00000029602.12_120792872_120817084_1	chr5	+	2165	19	NNC	ENSMUSG00000029602.12	novel	2173	19	NA	NA	4	3	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGATAGGAGCAAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	120792871	120817084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812798_120813538_120813593_120813670_120813807_120814852_120814974_120816687_120816747_120816986
ENSMUSG00000029602.12_120792872_120817084_2	chr5	+	2167	19	NNC	ENSMUSG00000029602.12	novel	2173	19	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGATAGGAGCAAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	120792871	120817084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813538_120813588_120813670_120813807_120814852_120814974_120816687_120816747_120816986
ENSMUSG00000029602.12_120792872_120817084_3	chr5	+	2163	19	NNC	ENSMUSG00000029602.12	novel	2173	19	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGATAGGAGCAAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	120792871	120817084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809614_120809751_120812631_120812805_120813538_120813593_120813670_120813807_120814852_120814974_120816687_120816747_120816986
ENSMUSG00000029602.12_120792872_120817084_4	chr5	+	2167	19	NNC	ENSMUSG00000029602.12	novel	2173	19	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGATAGGAGCAAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	120792871	120817084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800376_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813538_120813593_120813670_120813807_120814852_120814974_120816687_120816747_120816986
ENSMUSG00000029602.12_120792872_120817084_5	chr5	+	2172	19	FSM	ENSMUSG00000029602.12	ENST00000446861.7	2173	19	4	-3	4	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGATAGGAGCAAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	120792871	120817084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813538_120813593_120813670_120813807_120814852_120814974_120816687_120816747_120816986
ENSMUSG00000029602.12_120792872_120817084_6	chr5	+	2171	19	NNC	ENSMUSG00000029602.12	novel	2173	19	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGATAGGAGCAAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	120792871	120817084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813538_120813593_120813670_120813807_120814853_120814974_120816687_120816747_120816986
ENSMUSG00000029602.12_120802881_120813494_1	chr5	+	732	6	ISM	ENSMUSG00000029602.12	ENST00000261729.9	2257	19	10013	3587	10013	-3587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTGGACGAGGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	120802880	120813494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454
ENSMUSG00000029602.12_120804382_120813688_1	chr5	+	731	6	ISM	ENSMUSG00000029602.12	ENST00000261729.9	2257	19	11514	3393	11514	-3393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGCTGTCAGCCCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	120804381	120813688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670
ENSMUSG00000029602.12_120804447_120813728_1	chr5	+	706	6	ISM	ENSMUSG00000029602.12	ENST00000261729.9	2257	19	11579	3353	11579	-3353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCAAGCTGGTTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	120804446	120813728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670
ENSMUSG00000029602.12_120808412_120814905_1	chr5	+	712	6	ISM	ENSMUSG00000029602.12	ENST00000261729.9	2257	19	15544	2176	15544	-2176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGGATCCTGACGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	120808411	120814905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852
ENSMUSG00000029602.12_120809699_120817008_1	chr5	+	701	7	ISM	ENSMUSG00000029602.12	ENST00000261729.9	2257	19	16831	73	16831	-73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGCAGAGAGCAGCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	120809698	120817008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816747_120816986
ENSMUSG00000029610.14_143839623_143846483_1	chr5	-	910	4	FSM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	174	101	52	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCGAGCAGCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	143846483	143839622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846398
ENSMUSG00000029610.14_143839681_143846602_1	chr5	-	971	4	FSM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	55	159	55	-64	multi-exon	FALSE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTTAAGTCCTGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	143846602	143839680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846398
ENSMUSG00000029610.14_143839761_143846602_1	chr5	-	891	4	FSM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	55	239	55	-144	multi-exon	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGCAGATGTGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	143846602	143839760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846398
ENSMUSG00000029610.14_143841438_143846477_1	chr5	-	256	2	ISM	ENSMUSG00000029610.14	ENST00000395236.2	761	3	58	1821	58	-1821	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGCAGTCCCGCCACGA	NA	NA	NA	NA	NA	NA	NA	NA	143846477	143841437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143841615_143846398
ENSMUSG00000029613.16_143803543_143841074_1	chr5	+	4325	15	NNC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTTGGTGTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	143803542	143841074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_143803764_143808680_143808840_143810568_143810698_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ENSMUSG00000029613.16_143803543_143841074_2	chr5	+	4324	15	NNC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTTGGTGTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	143803542	143841074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820796_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ENSMUSG00000029613.16_143803543_143841074_3	chr5	+	4324	15	NNC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTTGGTGTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	143803542	143841074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814399_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ENSMUSG00000029613.16_143803543_143841074_4	chr5	+	4306	14	NNC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTTGGTGTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	143803542	143841074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_143803764_143808680_143808840_143810568_143810717_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ENSMUSG00000029613.16_143803543_143841074_5	chr5	+	4322	15	NNC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTTGGTGTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	143803542	143841074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816326_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ENSMUSG00000029614.14_121342544_121347167_1	chr5	+	1133	7	FSM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	0	137	0	-137	multi-exon	FALSE	canonical	NA	NA	NA	NA	10172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGGGTCCTGCTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	121342543	121347167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ENSMUSG00000029614.14_121343472_121347304_1	chr5	+	1189	6	NNC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	928	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	21870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTGACTATAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	121343471	121347304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_121343727_121343822_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ENSMUSG00000029614.14_121343472_121347304_2	chr5	+	1195	6	ISM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	928	0	928	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTGACTATAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	121343471	121347304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ENSMUSG00000029614.14_121343572_121347304_1	chr5	+	1095	6	ISM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	1028	0	1028	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTGACTATAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	121343571	121347304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ENSMUSG00000029614.14_121343572_121347304_2	chr5	+	1089	6	NNC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	1028	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTGACTATAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	121343571	121347304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_121343727_121343822_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ENSMUSG00000029616.10_121581679_121585299_1	chr5	-	2053	2	ISM	ENSMUSG00000029616.10	ENSMUST00000130451.2	5204	3	5270	2792	5260	1140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTAATTTTAGTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	121585299	121581678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121583636_121585203
ENSMUSG00000029616.10_121581763_121585319_1	chr5	-	1989	2	ISM	ENSMUSG00000029616.10	ENSMUST00000130451.2	5204	3	5250	2876	5240	1056	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCACTTTGTAGGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	121585319	121581762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121583636_121585203
ENSMUSG00000029616.10_121581922_121590411_1	chr5	-	2011	3	FSM	ENSMUSG00000029616.10	ENSMUST00000130451.2	5204	3	158	3035	148	897	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGCCACCACTGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	121590411	121581921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_121583636_121585203_121585343_121590253
ENSMUSG00000029616.10_121582062_121590550_1	chr5	-	2010	3	FSM	ENSMUSG00000029616.10	ENSMUST00000130451.2	5204	3	19	3175	9	757	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAATTTTTATTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	121590550	121582061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_121583636_121585203_121585343_121590253
ENSMUSG00000029616.10_121582819_121590411_1	chr5	-	975	2	FSM	ENSMUSG00000029616.10	ENSMUST00000052590.8	1123	2	148	0	148	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGGTTTTCTTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	121590411	121582818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_121583636_121590253
ENSMUSG00000029617.11_143924727_143951671_1	chr5	-	1673	13	FSM	ENSMUSG00000029617.11	ENST00000626257.2	1726	13	60	-7	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCCTGTTGAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	143951671	143924726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929477_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949811_143949910_143951516
ENSMUSG00000029617.11_143924898_143940977_1	chr5	-	982	9	ISM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	10694	171	10653	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAACCACATTTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	143940977	143924897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860
ENSMUSG00000029617.11_143924989_143929402_1	chr5	-	442	4	ISM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	22269	262	22228	-255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAACCTCAACAACCT	NA	NA	NA	NA	NA	NA	NA	NA	143929402	143924988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326
ENSMUSG00000029617.11_143925016_143946062_1	chr5	-	965	10	ISM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	5609	289	5568	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTCCACTGGCTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	143946062	143925015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020
ENSMUSG00000029617.11_143927522_143935037_1	chr5	-	428	4	ISM	ENSMUSG00000029617.11	ENST00000628813.2	1683	13	16593	2846	16593	-2788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGACCAGCGGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	143935037	143927521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143927584_143928289_143928449_143929326_143929477_143934980
ENSMUSG00000029617.11_143928293_143949678_1	chr5	-	1008	11	ISM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	1993	3566	1952	-3559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAATCCCAGCGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	143949678	143928292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620
ENSMUSG00000029617.11_143928416_143949853_1	chr5	-	963	12	ISM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	1818	3689	1777	-3682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAACCACATGAATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	143949853	143928415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811
ENSMUSG00000029617.11_143929414_143940977_1	chr5	-	436	5	ISM	ENSMUSG00000029617.11	ENST00000628813.2	1683	13	10653	4738	10653	-4680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGGACAGCATCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	143940977	143929413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143929477_143934980_143935093_143935361_143935424_143938194_143938277_143940860
ENSMUSG00000029617.11_143940860_143949859_1	chr5	-	435	5	ISM	ENSMUSG00000029617.11	ENST00000628813.2	1683	13	1771	16184	1771	-16126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTAGCACCCTGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	143949859	143940859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949811
ENSMUSG00000029617.11_143941018_143951671_1	chr5	-	482	6	ISM	ENSMUSG00000029617.11	ENST00000626257.2	1726	13	60	16284	0	-16284	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCATGTGACCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	143951671	143941017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949811_143949910_143951516
ENSMUSG00000029621.15_145020640_145045571_1	chr5	+	1625	10	NNC	ENSMUSG00000029621.15	novel	1632	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	910	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTTTCTTTATACTCT	NA	NA	NA	NA	NA	NA	NA	NA	145020639	145045571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043854_145043946_145045193
ENSMUSG00000029621.15_145020640_145045571_2	chr5	+	1623	10	NNC	ENSMUSG00000029621.15	novel	1632	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTTTCTTTATACTCT	NA	NA	NA	NA	NA	NA	NA	NA	145020639	145045571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041319_145041507_145041702_145043854_145043946_145045186
ENSMUSG00000029621.15_145020716_145045571_1	chr5	+	1556	10	FSM	ENSMUSG00000029621.15	ENSMUST00000031625.15	1632	10	76	0	76	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTTTCTTTATACTCT	NA	NA	NA	NA	NA	NA	NA	NA	145020715	145045571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043854_145043946_145045186
ENSMUSG00000029621.15_145020716_145045571_2	chr5	+	1551	10	NNC	ENSMUSG00000029621.15	novel	1632	10	NA	NA	76	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTTTCTTTATACTCT	NA	NA	NA	NA	NA	NA	NA	NA	145020715	145045571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043859_145043946_145045186
ENSMUSG00000029621.15_145020716_145045571_3	chr5	+	1551	10	NNC	ENSMUSG00000029621.15	novel	1632	10	NA	NA	76	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTTTCTTTATACTCT	NA	NA	NA	NA	NA	NA	NA	NA	145020715	145045571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038075_145041251_145041328_145041507_145041702_145043854_145043946_145045186
ENSMUSG00000029621.15_145020716_145045571_4	chr5	+	1550	10	NNC	ENSMUSG00000029621.15	novel	1632	10	NA	NA	76	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTTTCTTTATACTCT	NA	NA	NA	NA	NA	NA	NA	NA	145020715	145045571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_145020783_145027962_145028051_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043854_145043946_145045186
ENSMUSG00000029622.17_145051068_145065462_1	chr5	+	2015	10	FSM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	43	1047	-20	579	multi-exon	FALSE	canonical	NA	NA	NA	NA	4623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTTTTACATAGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	145051067	145065462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ENSMUSG00000029622.17_145051126_145063596_1	chr5	+	959	8	ISM	ENSMUSG00000029622.17	ENST00000455009.6	1366	10	38	1166	4	-1166	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCCGGCTGGATGTACC	NA	NA	NA	NA	NA	NA	NA	NA	145051125	145063596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_145051188_145058431_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536
ENSMUSG00000029622.17_145058461_145065606_1	chr5	+	2081	9	ISM	ENSMUSG00000029622.17	ENST00000455009.6	1366	10	7373	-844	7339	723	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGCCTCAGGTTTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	145058460	145065606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ENSMUSG00000029622.17_145060376_145065756_1	chr5	+	2040	7	ISM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	9351	753	9254	-753	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTTACTACTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	145060375	145065756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ENSMUSG00000029622.17_145061396_145065963_1	chr5	+	2022	6	ISM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	10371	546	10274	-546	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCTCTGGCAGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	145061395	145065963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ENSMUSG00000029622.17_145062448_145066099_1	chr5	+	1989	5	ISM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	11423	410	11326	-410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGCCTGAATGTACAAG	NA	NA	NA	NA	NA	NA	NA	NA	145062447	145066099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ENSMUSG00000029622.17_145062701_145066275_1	chr5	+	2018	4	ISM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	11676	234	11579	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAGGTTCAGGACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	145062700	145066275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_145062777_145063536_145063743_145064445_145064537_145064630
ENSMUSG00000029622.17_145063568_145066379_1	chr5	+	2015	3	ISM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	12543	130	12446	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTAGGTGTGTGCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	145063567	145066379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_145063743_145064445_145064537_145064630
ENSMUSG00000029622.17_145064443_145066509_1	chr5	+	1973	2	ISM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	13418	0	13321	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCATGTCTTGTCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	145064442	145066509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_145064537_145064630
ENSMUSG00000029623.15_145065579_145073803_1	chr5	-	2081	5	ISM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	3245	0	3245	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGATGCTTCTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	145073803	145065578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711
ENSMUSG00000029623.15_145065703_145076861_1	chr5	-	2042	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	187	124	187	-124	multi-exon	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGTGCAGAAGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	145076861	145065702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
ENSMUSG00000029623.15_145065738_145076864_1	chr5	-	2010	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	184	159	184	-159	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGTTCCAACACCAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	145076864	145065737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
ENSMUSG00000029623.15_145065740_145076864_1	chr5	-	2008	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	184	161	184	-161	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGGTTCCAACACCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	145076864	145065739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
ENSMUSG00000029623.15_145065793_145076927_1	chr5	-	2018	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	121	214	121	-214	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGCTAGCTGTAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	145076927	145065792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
ENSMUSG00000029623.15_145065847_145077048_1	chr5	-	2085	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	0	268	0	-268	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTTGGCTCCAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	145077048	145065846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
ENSMUSG00000029623.15_145065861_145077048_1	chr5	-	2071	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	0	282	0	-282	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTACCCAGATTCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	145077048	145065860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
ENSMUSG00000029625.17_145104265_145118851_1	chr5	+	1471	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160629.8	1713	8	242	0	201	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	145104264	145118851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115645_145115739_145117945
ENSMUSG00000029625.17_145110115_145118851_1	chr5	+	1420	6	ISM	ENSMUSG00000029625.17	ENSMUST00000162244.8	1387	8	6051	-288	6051	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	145110114	145118851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115642_145115739_145117945
ENSMUSG00000029627.13_145131976_145138431_1	chr5	-	1376	2	FSM	ENSMUSG00000029627.13	ENST00000426306.2	1376	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCTCCTAGCTTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	145138431	145131975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_145133010_145138089
ENSMUSG00000029627.13_145132293_145138305_1	chr5	-	1057	3	FSM	ENSMUSG00000029627.13	ENSMUST00000031632.9	1967	3	373	537	126	-317	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGAGTGTGGGGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	145138305	145132292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_145133010_145135486_145135611_145138089
ENSMUSG00000029629.18_11926017_12007541_1	chr6	+	3343	16	FSM	ENSMUSG00000029629.18	ENSMUST00000090632.11	3985	16	103	539	102	-471	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTGCTTTCCAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	11926016	12007541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983
ENSMUSG00000029629.18_11926782_12007864_1	chr6	+	3335	15	ISM	ENSMUSG00000029629.18	ENSMUST00000115510.8	3353	17	902	148	867	-148	intron_retention	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACAGTGTGGAACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	11926781	12007864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983
ENSMUSG00000029632.8_11900291_11907482_1	chr6	-	607	4	NNC	ENSMUSG00000029632.8	novel	610	4	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	4659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTTGAATTTCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	11907482	11900290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_11900591_11905200_11905253_11906012_11906108_11907322
ENSMUSG00000029632.8_11900291_11907482_2	chr6	-	605	4	NNC	ENSMUSG00000029632.8	novel	610	4	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	5603	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTTGAATTTCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	11907482	11900290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_11900591_11905200_11905262_11906023_11906108_11907322
ENSMUSG00000029632.8_11900291_11907482_3	chr6	-	601	4	NNC	ENSMUSG00000029632.8	novel	610	4	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	5848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTTGAATTTCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	11907482	11900290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_11900591_11905200_11905253_11906018_11906108_11907322
ENSMUSG00000029632.8_11900291_11907482_4	chr6	-	615	4	NNC	ENSMUSG00000029632.8	novel	610	4	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	4657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTTGAATTTCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	11907482	11900290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_11900591_11905195_11905262_11906018_11906108_11907322
ENSMUSG00000029634.16_146147542_146152957_1	chr5	-	1252	2	ISM	ENSMUSG00000029634.16	ENSMUST00000067837.10	2388	5	4829	775	4754	-775	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGCCAACGTTTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	146152957	146147541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_146148743_146152906
ENSMUSG00000029634.16_146147754_146152985_1	chr5	-	1068	2	ISM	ENSMUSG00000029634.16	ENSMUST00000067837.10	2388	5	4801	987	4726	-987	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGGGGCTTCCACAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	146152985	146147753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_146148743_146152906
ENSMUSG00000029634.16_146148113_146157711_1	chr5	-	1169	5	FSM	ENSMUSG00000029634.16	ENSMUST00000169407.9	3276	5	0	2107	0	-1346	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTCAGAGACAGAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	146157711	146148112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146157547
ENSMUSG00000029634.16_146148113_146158365_1	chr5	-	1341	5	FSM	ENSMUSG00000029634.16	ENSMUST00000161859.8	3452	5	0	2111	0	-1346	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTCAGAGACAGAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	146158365	146148112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146158029
ENSMUSG00000029641.9_146782000_146783991_1	chr5	+	462	4	FSM	ENSMUSG00000029641.9	ENSMUST00000031646.8	1126	4	119	545	119	-545	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACAAAGGAGACCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	146781999	146783991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_146782151_146782469_146782527_146782649_146782730_146783817
ENSMUSG00000029642.12_147014156_147048171_1	chr5	+	1130	3	NNC	ENSMUSG00000029642.12	novel	1137	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1017	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCCTCTTTTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	147014155	147048171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_147014504_147038038_147038114_147047464
ENSMUSG00000029642.12_147014156_147048171_2	chr5	+	1132	3	NNC	ENSMUSG00000029642.12	novel	1137	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1017	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCCTCTTTTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	147014155	147048171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_147014504_147038043_147038114_147047457
ENSMUSG00000029648.14_147505553_147525427_1	chr5	-	1007	9	FSM	ENSMUSG00000029648.14	ENST00000451650.1	1007	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGTCATGATCATAAGG	NA	NA	NA	NA	NA	NA	NA	NA	147525427	147505552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_147505637_147507673_147507817_147508260_147508367_147512949_147513050_147515134_147515247_147517111_147517235_147518912_147519004_147519356_147519515_147525337
ENSMUSG00000029649.11_147797438_147812343_1	chr5	+	489	6	FSM	ENSMUSG00000029649.11	ENSMUST00000031654.10	1579	6	167	923	0	12	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGCCCGCGCAGGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	147797437	147812343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_147797502_147799362_147799461_147805532_147805594_147806221_147806324_147809375_147809470_147812273
ENSMUSG00000029649.11_147799362_147812459_1	chr5	+	536	5	NNC	ENSMUSG00000029649.11	novel	1579	6	NA	NA	1899	128	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTTTGGGTTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	147799361	147812459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_147799461_147805532_147805594_147806227_147806324_147809375_147809470_147812273
ENSMUSG00000029649.11_147799362_147812459_2	chr5	+	542	5	ISM	ENSMUSG00000029649.11	ENSMUST00000031654.10	1579	6	2091	807	1899	128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTTTGGGTTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	147799361	147812459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_147799461_147805532_147805594_147806221_147806324_147809375_147809470_147812273
ENSMUSG00000029649.11_147806222_147812641_1	chr5	+	564	3	ISM	ENSMUSG00000029649.11	ENSMUST00000031654.10	1579	6	8951	625	8759	310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTCGGTAGAATGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	147806221	147812641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_147806324_147809375_147809470_147812273
ENSMUSG00000029655.18_150566036_150585980_1	chr5	-	2107	3	FSM	ENSMUSG00000029655.18	ENST00000674327.1	2107	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGATCATTTATTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	150585980	150566035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_150566781_150574079_150574205_150584743
ENSMUSG00000029655.18_150566465_150574166_1	chr5	-	403	2	FSM	ENSMUSG00000029655.18	ENST00000674437.1	872	2	40	429	40	-429	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTTGTTTAGATCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	150574166	150566464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_150566781_150574079
ENSMUSG00000029655.18_150566478_150574206_1	chr5	-	430	2	FSM	ENSMUSG00000029655.18	ENST00000674437.1	872	2	0	442	0	-442	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGTGTTTCCTACAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	150574206	150566477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_150566781_150574079
ENSMUSG00000029657.16_149540009_149550853_1	chr5	-	2296	9	ISM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	8950	0	8783	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGTTCTTTTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	149550853	149540008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719
ENSMUSG00000029657.16_149540477_149553361_1	chr5	-	2274	12	ISM	ENSMUSG00000029657.16	ENSMUST00000202089.4	3054	17	6442	-157	6275	157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAGCTAGTGAACCGTA	NA	NA	NA	NA	NA	NA	NA	NA	149553361	149540476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251
ENSMUSG00000029657.16_149540634_149553855_1	chr5	-	2304	13	ISM	ENSMUSG00000029657.16	ENSMUST00000202089.4	3054	17	5948	0	5781	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTGTTTTGTTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	149553855	149540633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803
ENSMUSG00000029657.16_149540748_149554324_1	chr5	-	2372	14	ISM	ENSMUSG00000029657.16	ENSMUST00000202089.4	3054	17	5479	114	5312	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTACAGTATTGCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	149554324	149540747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224
ENSMUSG00000029657.16_149540920_149555549_1	chr5	-	2374	16	ISM	ENSMUSG00000029657.16	ENST00000630972.2	3278	18	4375	612	4087	-286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCCTGTATAACAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	149555549	149540919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498
ENSMUSG00000029657.16_149541072_149555604_1	chr5	-	2277	16	ISM	ENSMUSG00000029657.16	ENST00000630972.2	3278	18	4320	764	4032	-438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTTAGAAGGCAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	149555604	149541071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498
ENSMUSG00000029657.16_149541137_149555639_1	chr5	-	2247	16	ISM	ENSMUSG00000029657.16	ENST00000630972.2	3278	18	4285	829	3997	-503	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAAAAATCGAGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	149555639	149541136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498
ENSMUSG00000029657.16_149541884_149559506_1	chr5	-	2306	17	ISM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	297	1875	130	-1250	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCGAACTCATGAAATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	149559506	149541883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ENSMUSG00000029657.16_149541953_149559636_1	chr5	-	2367	17	ISM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	167	1944	0	-1319	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGATGGAGTGGATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	149559636	149541952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ENSMUSG00000029657.16_149542426_149559755_1	chr5	-	2305	15	ISM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	48	2417	48	-1792	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCCTGTTCTCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	149559755	149542425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ENSMUSG00000029657.16_149548438_149559841_1	chr5	-	1537	11	ISM	ENSMUSG00000029657.16	ENST00000630972.2	3278	18	83	8130	-38	-7804	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTAAGTTGCTAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	149559841	149548437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559780
ENSMUSG00000029657.16_149548503_149559872_1	chr5	-	1503	11	ISM	ENSMUSG00000029657.16	ENST00000630972.2	3278	18	52	8195	52	-7869	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTCCTCTCTCGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	149559872	149548502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559780
ENSMUSG00000029657.16_149548559_149559923_1	chr5	-	1498	11	ISM	ENSMUSG00000029657.16	ENST00000630972.2	3278	18	1	8251	1	-7925	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTTCACCATCTCCACG	NA	NA	NA	NA	NA	NA	NA	NA	149559923	149548558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559780
ENSMUSG00000029659.17_149345661_149353445_1	chr5	+	641	4	ISM	ENSMUSG00000029659.17	ENSMUST00000201083.2	2669	5	8356	1722	8356	-1722	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGGGAGTGGACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	149345660	149353445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_149345709_149350398_149350512_149350685_149350972_149353251
ENSMUSG00000029659.17_149350754_149353696_1	chr5	+	663	2	ISM	ENSMUSG00000029659.17	ENSMUST00000201083.2	2669	5	13449	1471	13449	-1471	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAACCTCTGTGGGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	149350753	149353696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_149350972_149353251
ENSMUSG00000029659.17_149350842_149353738_1	chr5	+	617	2	ISM	ENSMUSG00000029659.17	ENSMUST00000201083.2	2669	5	13537	1429	13537	-1429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATCCTGGATCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	149350841	149353738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_149350972_149353251
ENSMUSG00000029659.17_149350910_149353821_1	chr5	+	632	2	ISM	ENSMUSG00000029659.17	ENSMUST00000201083.2	2669	5	13605	1346	13605	-1346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTAAAGCCAGTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	149350909	149353821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_149350972_149353251
ENSMUSG00000029661.17_4505824_4510747_1	chr6	+	192	3	NNC	ENSMUSG00000029661.17	novel	5348	52	NA	NA	331	-30797	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCCTGGTCCTCCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	4505823	4510747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_4505916_4509603_4509640_4510683
ENSMUSG00000029661.17_4515481_4516445_1	chr6	+	216	4	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	9988	25099	9988	-25099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGACTTCTTCCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	4515480	4516445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_4515535_4515628_4515683_4515960_4516015_4516391
ENSMUSG00000029661.17_4515628_4516953_1	chr6	+	217	4	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	10135	24591	10135	-24591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATACTGAGTTAGGATC	NA	NA	NA	NA	NA	NA	NA	NA	4515627	4516953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_4515683_4515960_4516015_4516391_4516446_4516899
ENSMUSG00000029661.17_4516935_4519315_1	chr6	+	187	5	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	11442	22229	11442	-22229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTTTCCCAGGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	4516934	4519315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_4516954_4518473_4518519_4518790_4518845_4518947_4518993_4519291
ENSMUSG00000029661.17_4520624_4521284_1	chr6	+	188	3	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	15131	20260	15131	-20260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCACTCATCACTTAC	NA	NA	NA	NA	NA	NA	NA	NA	4520623	4521284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_4520650_4520771_4520880_4521230
ENSMUSG00000029661.17_4527066_4529104_1	chr6	+	233	3	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	21573	12440	21573	-12440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGAGATGGTGCTCGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	4527065	4529104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_4527154_4528305_4528414_4529067
ENSMUSG00000029661.17_4531125_4531948_1	chr6	+	195	3	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	25632	9596	25632	-9596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATTTACAATTGACT	NA	NA	NA	NA	NA	NA	NA	NA	4531124	4531948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_4531158_4531237_4531346_4531894
ENSMUSG00000029661.17_4531300_4533787_1	chr6	+	200	4	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	25807	7757	25807	-7757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCGTGGTCCCCGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	4531299	4533787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_4531346_4531894_4531949_4532743_4532798_4533741
ENSMUSG00000029661.17_4537202_4537867_1	chr6	+	223	3	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	31709	3677	31709	-3677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGCCTCGCTCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	4537201	4537867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_4537227_4537349_4537458_4537777
ENSMUSG00000029661.17_4537440_4537990_1	chr6	+	231	2	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	31947	3554	31947	-3554	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCACGTGCCGGGACTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	4537439	4537990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_4537458_4537777
ENSMUSG00000029661.17_4537885_4538703_1	chr6	+	230	2	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	32392	2841	32392	-2841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCATCCAGGCCCAACCT	NA	NA	NA	NA	NA	NA	NA	NA	4537884	4538703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_4538037_4538625
ENSMUSG00000029661.17_4537952_4538748_1	chr6	+	208	2	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	32459	2796	32459	-2796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCGCGCCCAGGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	4537951	4538748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_4538037_4538625
ENSMUSG00000029661.17_4538001_4538801_1	chr6	+	212	2	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	32508	2743	32508	-2743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGCCAGGTACGTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	4538000	4538801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_4538037_4538625
ENSMUSG00000029661.17_4538671_4539546_1	chr6	+	224	2	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	33178	1998	33178	-1998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACATCACCTACCACTG	NA	NA	NA	NA	NA	NA	NA	NA	4538670	4539546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_4538811_4539462
ENSMUSG00000029661.17_4538787_4539637_1	chr6	+	199	2	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	33294	1907	33294	-1907	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATGTTGAACTTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	4538786	4539637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_4538811_4539462
ENSMUSG00000029661.17_4539519_4540532_1	chr6	+	204	2	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	34026	1012	34026	-1012	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAAGACAATCATTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	4539518	4540532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_4539706_4540515
ENSMUSG00000029661.17_4539576_4540577_1	chr6	+	192	2	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	34083	967	34083	-967	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTCCTTGACATTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	4539575	4540577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_4539706_4540515
ENSMUSG00000029661.17_4539617_4540642_1	chr6	+	216	2	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	34124	902	34124	-902	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCGTCTGTTTCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	4539616	4540642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_4539706_4540515
ENSMUSG00000029669.15_21771394_21851144_1	chr6	-	2224	7	ISM	ENSMUSG00000029669.15	ENSMUST00000031678.10	2490	9	1370	0	943	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGTTTGCGTATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	21851144	21771393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_21772936_21795576_21795721_21799877_21799986_21806237_21806313_21835386_21835523_21836411_21836495_21851008
ENSMUSG00000029669.15_21771394_21851145_1	chr6	-	2222	7	NNC	ENSMUSG00000029669.15	novel	2490	9	NA	NA	942	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGTTTGCGTATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	21851145	21771393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_21772936_21795576_21795721_21799877_21799979_21806233_21806313_21835386_21835523_21836411_21836495_21851008
ENSMUSG00000029669.15_21771394_21851145_2	chr6	-	2220	7	NNC	ENSMUSG00000029669.15	novel	2490	9	NA	NA	942	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGTTTGCGTATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	21851145	21771393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_21772936_21795576_21795721_21799877_21799986_21806237_21806313_21835386_21835518_21836411_21836495_21851008
ENSMUSG00000029669.15_21771394_21852087_1	chr6	-	2295	8	NNC	ENSMUSG00000029669.15	novel	2490	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGTTTGCGTATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	21852087	21771393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_21772936_21795576_21795721_21799877_21799986_21806243_21806313_21835386_21835523_21836411_21836495_21851008_21851145_21852010
ENSMUSG00000029669.15_21771499_21852087_1	chr6	-	2191	8	NNC	ENSMUSG00000029669.15	novel	2490	9	NA	NA	0	-105	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATTTATTTGAAACGGG	NA	NA	NA	NA	NA	NA	NA	NA	21852087	21771498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_21772936_21795576_21795721_21799877_21799986_21806237_21806313_21835386_21835518_21836411_21836495_21851008_21851145_21852010
ENSMUSG00000029669.15_21771518_21852102_1	chr6	-	2186	8	NNC	ENSMUSG00000029669.15	novel	2490	9	NA	NA	-15	-124	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTTACAAGAGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	21852102	21771517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_21772936_21795576_21795721_21799877_21799986_21806243_21806313_21835386_21835523_21836411_21836495_21851008_21851145_21852010
ENSMUSG00000029669.15_21771535_21852168_1	chr6	-	2235	8	NNC	ENSMUSG00000029669.15	novel	2490	9	NA	NA	-81	-141	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGATGCAGAATATTAATT	NA	NA	NA	NA	NA	NA	NA	NA	21852168	21771534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_21772936_21795576_21795715_21799877_21799986_21806237_21806313_21835386_21835523_21836411_21836495_21851008_21851145_21852010
ENSMUSG00000029669.15_21771549_21852168_1	chr6	-	2220	8	NNC	ENSMUSG00000029669.15	novel	2490	9	NA	NA	-81	-155	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACACTGTAGCAAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	21852168	21771548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_21772936_21795576_21795721_21799877_21799979_21806237_21806313_21835386_21835523_21836411_21836495_21851008_21851145_21852010
ENSMUSG00000029669.15_21771584_21852514_1	chr6	-	2300	9	FSM	ENSMUSG00000029669.15	ENSMUST00000031678.10	2490	9	0	190	0	-190	multi-exon	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACCAGAGAAAATTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	21852514	21771583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_21772936_21795576_21795721_21799877_21799986_21806237_21806313_21835386_21835523_21836411_21836495_21851008_21851145_21852010_21852167_21852404
ENSMUSG00000029669.15_21771642_21852514_1	chr6	-	2237	9	NNC	ENSMUSG00000029669.15	novel	2490	9	NA	NA	0	-248	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAACAACATTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	21852514	21771641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_21772936_21795576_21795721_21799877_21799986_21806237_21806313_21835386_21835518_21836411_21836495_21851008_21851145_21852010_21852167_21852404
ENSMUSG00000029669.15_21771645_21852514_1	chr6	-	2239	9	FSM	ENSMUSG00000029669.15	ENSMUST00000031678.10	2490	9	0	251	0	-251	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGAGAAACAACATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	21852514	21771644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_21772936_21795576_21795721_21799877_21799986_21806237_21806313_21835386_21835523_21836411_21836495_21851008_21851145_21852010_21852167_21852404
ENSMUSG00000029669.15_21771656_21852514_1	chr6	-	2222	9	NNC	ENSMUSG00000029669.15	novel	2490	9	NA	NA	0	-262	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTAATTTTACAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	21852514	21771655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_21772936_21795576_21795721_21799877_21799986_21806243_21806313_21835386_21835523_21836411_21836495_21851008_21851145_21852010_21852167_21852404
ENSMUSG00000029669.15_21771661_21852514_1	chr6	-	2217	9	NNC	ENSMUSG00000029669.15	novel	2490	9	NA	NA	0	-267	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTGATGTAATTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	21852514	21771660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_21772936_21795576_21795715_21799877_21799986_21806237_21806313_21835386_21835523_21836411_21836495_21851008_21851145_21852010_21852167_21852404
ENSMUSG00000029669.15_21771663_21852514_1	chr6	-	2221	9	FSM	ENSMUSG00000029669.15	ENSMUST00000031678.10	2490	9	0	269	0	-269	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGTTGATGTAATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	21852514	21771662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_21772936_21795576_21795721_21799877_21799986_21806237_21806313_21835386_21835523_21836411_21836495_21851008_21851145_21852010_21852167_21852404
ENSMUSG00000029669.15_21771692_21852514_1	chr6	-	2192	9	FSM	ENSMUSG00000029669.15	ENSMUST00000031678.10	2490	9	0	298	0	-298	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTTTTGCAATCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	21852514	21771691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_21772936_21795576_21795721_21799877_21799986_21806237_21806313_21835386_21835523_21836411_21836495_21851008_21851145_21852010_21852167_21852404
ENSMUSG00000029669.15_21772317_21799962_1	chr6	-	704	2	ISM	ENSMUSG00000029669.15	ENSMUST00000120965.8	2157	7	52125	923	52125	-923	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACTGGAGCTGATATGA	NA	NA	NA	NA	NA	NA	NA	NA	21799962	21772316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_21772936_21799877
ENSMUSG00000029670.13_21949570_21976037_1	chr6	+	3793	12	NNC	ENSMUSG00000029670.13	novel	3800	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGCTGAGTGTTCGAT	NA	NA	NA	NA	NA	NA	NA	NA	21949569	21976037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_21949793_21950036_21950102_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ENSMUSG00000029672.17_22307505_22328677_1	chr6	-	1479	6	ISM	ENSMUSG00000029672.17	ENST00000312214.5	660	7	10702	-946	10702	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGCCTAAACGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	22328677	22307504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553
ENSMUSG00000029672.17_22307505_22339320_1	chr6	-	1547	7	FSM	ENSMUSG00000029672.17	ENST00000312214.5	660	7	59	-946	59	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGCCTAAACGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	22339320	22307504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22339252
ENSMUSG00000029672.17_22307708_22343301_1	chr6	-	1437	8	ISM	ENSMUSG00000029672.17	ENST00000359943.8	1813	9	12806	203	-3922	173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACAGAACTGGGGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	22343301	22307707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22339252_22339377_22343264
ENSMUSG00000029672.17_22307881_22356072_1	chr6	-	1402	9	FSM	ENSMUSG00000029672.17	ENST00000359943.8	1813	9	35	376	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAGATTTGTGAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	22356072	22307880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22339252_22339377_22343264_22343319_22355951
ENSMUSG00000029672.17_22308459_22328677_1	chr6	-	525	6	ISM	ENSMUSG00000029672.17	ENST00000312214.5	660	7	10702	8	10702	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGACTGACGGGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	22328677	22308458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553
ENSMUSG00000029672.17_22308459_22339320_1	chr6	-	593	7	FSM	ENSMUSG00000029672.17	ENST00000312214.5	660	7	59	8	59	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGACTGACGGGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	22339320	22308458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22339252
ENSMUSG00000029672.17_22328614_22356072_1	chr6	-	332	5	ISM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	93	22095	25	-20163	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGGCTAGTGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	22356072	22328613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
ENSMUSG00000029676.16_25753230_25771548_1	chr6	-	616	6	ISM	ENSMUSG00000029676.16	ENST00000654766.1	1345	9	23110	82	23110	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGACGGCAGGTCGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	25771548	25753229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_25753354_25756161_25756319_25757223_25757269_25758816_25758903_25764250_25764424_25771517
ENSMUSG00000029676.16_25753271_25771609_1	chr6	-	636	6	ISM	ENSMUSG00000029676.16	ENST00000654766.1	1345	9	23049	123	23049	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATTGTATTATTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	25771609	25753270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_25753354_25756161_25756319_25757223_25757269_25758816_25758903_25764250_25764424_25771517
ENSMUSG00000029676.16_25753318_25771663_1	chr6	-	643	6	ISM	ENSMUSG00000029676.16	ENST00000654766.1	1345	9	22995	170	22995	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAAGATGCTGCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	25771663	25753317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_25753354_25756161_25756319_25757223_25757269_25758816_25758903_25764250_25764424_25771517
ENSMUSG00000029676.16_25756178_25775557_1	chr6	-	635	6	ISM	ENSMUSG00000029676.16	ENST00000654766.1	1345	9	19101	3030	19101	1506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAATGTCATTCAGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	25775557	25756177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_25756319_25757223_25757269_25758816_25758903_25764250_25764424_25771517_25771674_25775523
ENSMUSG00000029676.16_25756260_25775576_1	chr6	-	572	6	ISM	ENSMUSG00000029676.16	ENST00000654766.1	1345	9	19082	3112	19082	1424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCTCAACAATATCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	25775576	25756259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_25756319_25757223_25757269_25758816_25758903_25764250_25764424_25771517_25771674_25775523
ENSMUSG00000029676.16_25756293_25775645_1	chr6	-	608	6	ISM	ENSMUSG00000029676.16	ENST00000654766.1	1345	9	19013	3145	19013	1391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACCACTGTGTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	25775645	25756292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_25756319_25757223_25757269_25758816_25758903_25764250_25764424_25771517_25771674_25775523
ENSMUSG00000029676.16_25758817_25775814_1	chr6	-	706	4	ISM	ENSMUSG00000029676.16	ENST00000654766.1	1345	9	18844	5669	18844	-1133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGACAATTTATAACGC	NA	NA	NA	NA	NA	NA	NA	NA	25775814	25758816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_25758903_25764250_25764424_25771517_25771674_25775523
ENSMUSG00000029676.16_25764347_25778921_1	chr6	-	608	4	ISM	ENSMUSG00000029676.16	ENST00000654766.1	1345	9	15737	11199	15737	-6663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGGCTGGAGTTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	25778921	25764346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_25764424_25771517_25771674_25775523_25775815_25778837
ENSMUSG00000029676.16_25771577_25794611_1	chr6	-	572	4	ISM	ENSMUSG00000029676.16	ENST00000654766.1	1345	9	47	18429	47	-13893	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGTGGTAGACATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	25794611	25771576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_25771674_25775523_25775815_25778837_25778969_25794558
ENSMUSG00000029680.3_24748328_24765913_1	chr6	+	1378	4	FSM	ENSMUSG00000029680.3	ENST00000223026.9	1584	4	4	202	0	-202	multi-exon	FALSE	canonical	NA	NA	NA	NA	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTGACCTAGCTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	24748327	24765913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_24748392_24755735_24756738_24763794_24763885_24765691
ENSMUSG00000029680.3_24755734_24765913_1	chr6	+	1311	3	NNC	ENSMUSG00000029680.3	novel	1584	4	NA	NA	7406	-202	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTGACCTAGCTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	24755733	24765913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_24756738_24763799_24763885_24765691
ENSMUSG00000029680.3_24755847_24766115_1	chr6	+	1405	3	ISM	ENSMUSG00000029680.3	ENST00000223026.9	1584	4	7523	0	7519	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCATCCTTTTAAAAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	24755846	24766115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_24756738_24763794_24763885_24765691
ENSMUSG00000029681.13_135199969_135208892_1	chr5	+	234	3	ISM	ENSMUSG00000029681.13	ENSMUST00000031692.12	1758	6	2832	1817	2703	-1793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCCTGAGCCCAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	135199968	135208892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135200017_135205982_135206080_135208803
ENSMUSG00000029681.13_135208898_135209741_1	chr5	+	207	3	ISM	ENSMUSG00000029681.13	ENSMUST00000031692.12	1758	6	11761	968	11632	-944	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGACCAACCTGTAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	135208897	135209741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135208975_135209369_135209450_135209691
ENSMUSG00000029684.15_24614405_24618367_1	chr6	-	2037	2	ISM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	46641	601	46620	-601	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGAAGTTTGAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	24618367	24614404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_24616346_24618271
ENSMUSG00000029684.15_24614522_24619261_1	chr6	-	2011	3	ISM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	45747	718	45726	-718	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAACTTTAAATAAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	24619261	24614521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_24616346_24618271_24618381_24619183
ENSMUSG00000029684.15_24614987_24624251_1	chr6	-	2003	4	ISM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	40757	1183	40736	-1183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCTCACATTGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	24624251	24614986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234
ENSMUSG00000029684.15_24615412_24633887_1	chr6	-	2003	8	ISM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	31121	1608	31100	-1608	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGCACCCTGTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	24633887	24615411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835
ENSMUSG00000029684.15_24615529_24634636_1	chr6	-	1997	9	ISM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	30372	1725	30351	-1725	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCCCCAAAATAGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	24634636	24615528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570
ENSMUSG00000029684.15_24615770_24664624_1	chr6	-	2002	11	FSM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	384	1966	363	-1966	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACACTAATGCAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	24664624	24615769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
ENSMUSG00000029684.15_24615988_24664833_1	chr6	-	1993	11	FSM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	175	2184	154	-2184	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAACCTTAATGTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	24664833	24615987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
ENSMUSG00000029686.16_47431322_47502992_1	chr6	+	2880	21	FSM	ENSMUSG00000029686.16	ENST00000663835.1	2997	21	54	63	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTACAAGTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	47431321	47502992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000029686.16_47431322_47503073_1	chr6	+	2961	21	FSM	ENSMUSG00000029686.16	ENST00000663835.1	2997	21	54	-18	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATATTCCCATTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	47431321	47503073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000029686.16_47461677_47502992_1	chr6	+	2785	20	FSM	ENSMUSG00000029686.16	ENST00000666124.1	2774	20	0	-11	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTACAAGTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	47461676	47502992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000029686.16_47461817_47497747_1	chr6	+	1849	16	ISM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	30563	5326	140	-5189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGCTTCAGTATAACAC	NA	NA	NA	NA	NA	NA	NA	NA	47461816	47497747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726
ENSMUSG00000029686.16_47472082_47502546_1	chr6	+	1794	18	ISM	ENSMUSG00000029686.16	ENST00000660240.1	2567	19	10405	390	10405	-390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTACAGTTACTTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	47472081	47502546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000029686.16_47472095_47500704_1	chr6	+	1868	18	ISM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	40841	2369	10418	-2232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAGAGGAAGACCGCA	NA	NA	NA	NA	NA	NA	NA	NA	47472094	47500704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632
ENSMUSG00000029686.16_47474153_47502713_1	chr6	+	1869	17	ISM	ENSMUSG00000029686.16	ENST00000660240.1	2567	19	12476	223	12476	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGCAGGACTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	47474152	47502713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000029686.16_47478646_47502883_1	chr6	+	1805	15	ISM	ENSMUSG00000029686.16	ENST00000660240.1	2567	19	16969	53	16969	-53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCACACGAGAGCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	47478645	47502883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_47478724_47479360_47479525_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000029686.16_47478662_47502713_1	chr6	+	1913	17	ISM	ENSMUSG00000029686.16	ENST00000662132.1	3037	21	47352	343	16985	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGCAGGACTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	47478661	47502713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000029686.16_47479360_47502992_1	chr6	+	1837	14	ISM	ENSMUSG00000029686.16	ENST00000660240.1	2567	19	17683	-56	17683	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTACAAGTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	47479359	47502992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_47479525_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000029686.16_47485227_47502992_1	chr6	+	1899	15	ISM	ENSMUSG00000029686.16	ENST00000662132.1	3037	21	53917	64	23550	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTACAAGTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	47485226	47502992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000029687.17_47507353_47535228_1	chr6	-	2132	17	ISM	ENSMUSG00000029687.17	ENST00000320356.7	2658	20	36734	138	19366	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2060	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAATTTATAGTAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	47535228	47507352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111
ENSMUSG00000029687.17_47507475_47553602_1	chr6	-	2143	18	ISM	ENSMUSG00000029687.17	ENST00000320356.7	2658	20	18360	260	992	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTACTACCTCTTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	47553602	47507474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469
ENSMUSG00000029687.17_47507475_47554594_1	chr6	-	2256	19	ISM	ENSMUSG00000029687.17	ENST00000320356.7	2658	20	17368	260	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1827	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTACTACCTCTTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	47554594	47507474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477
ENSMUSG00000029687.17_47508675_47554603_1	chr6	-	2204	18	ISM	ENSMUSG00000029687.17	ENST00000320356.7	2658	20	17359	1460	-9	-1200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1393	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGGTAAAATACACAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	47554603	47508674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477
ENSMUSG00000029687.17_47508944_47571964_1	chr6	-	2229	18	ISM	ENSMUSG00000029687.17	ENST00000320356.7	2658	20	-2	1729	0	-1469	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1024	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATCCAAACTGCTATGC	NA	NA	NA	NA	NA	NA	NA	NA	47571964	47508943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ENSMUSG00000029687.17_47509836_47528695_1	chr6	-	1152	10	ISM	ENSMUSG00000029687.17	ENST00000483967.5	2473	20	43263	2482	25899	-2361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTCTGAGCTGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	47528695	47509835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665
ENSMUSG00000029687.17_47510676_47528829_1	chr6	-	1204	9	ISM	ENSMUSG00000029687.17	ENST00000483967.5	2473	20	43129	3322	25765	-3201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACATACTCGTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	47528829	47510675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665
ENSMUSG00000029687.17_47510676_47529350_1	chr6	-	1235	10	ISM	ENSMUSG00000029687.17	ENST00000483967.5	2473	20	42608	3322	25244	-3201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACATACTCGTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	47529350	47510675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319
ENSMUSG00000029687.17_47517611_47529422_1	chr6	-	1211	9	ISM	ENSMUSG00000029687.17	ENST00000483967.5	2473	20	42536	10257	25172	-10136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATAACAGTTATATCTG	NA	NA	NA	NA	NA	NA	NA	NA	47529422	47517610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319
ENSMUSG00000029687.17_47517777_47531198_1	chr6	-	1186	10	ISM	ENSMUSG00000029687.17	ENST00000483967.5	2473	20	40760	10423	23396	-10302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGATGTCGGTGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	47531198	47517776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057
ENSMUSG00000029687.17_47518850_47533025_1	chr6	-	1164	10	ISM	ENSMUSG00000029687.17	ENST00000483967.5	2473	20	38933	11496	21569	-11375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGACAGTTCGTGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	47533025	47518849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963
ENSMUSG00000029687.17_47520940_47535228_1	chr6	-	1184	9	ISM	ENSMUSG00000029687.17	ENSMUST00000092648.13	2115	18	19366	13465	19366	-13465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCTGTTCCCACTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	47535228	47520939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111
ENSMUSG00000029687.17_47521372_47553602_1	chr6	-	1257	9	ISM	ENSMUSG00000029687.17	ENST00000483967.5	2473	20	18356	14018	992	-13897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATATGTTTTCAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	47553602	47521371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496
ENSMUSG00000029687.17_47521504_47554594_1	chr6	-	1238	10	ISM	ENSMUSG00000029687.17	ENST00000483967.5	2473	20	17364	14150	0	-14029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTGAACCTCCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	47554594	47521503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477
ENSMUSG00000029687.17_47522717_47571964_1	chr6	-	1235	10	ISM	ENSMUSG00000029687.17	ENST00000483967.5	2473	20	-6	15363	0	-15242	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGTCAAAGGATACAGACA	NA	NA	NA	NA	NA	NA	NA	NA	47571964	47522716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ENSMUSG00000029687.17_47522717_47571992_1	chr6	-	1263	10	ISM	ENSMUSG00000029687.17	ENST00000483967.5	2473	20	-34	15363	-28	-15242	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGTCAAAGGATACAGACA	NA	NA	NA	NA	NA	NA	NA	NA	47571992	47522716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ENSMUSG00000029701.16_29124502_29127855_1	chr6	-	1081	2	ISM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	37150	927	37150	-927	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGGACAACTCTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	29127855	29124501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29125524_29127796
ENSMUSG00000029701.16_29124670_29128557_1	chr6	-	1087	3	ISM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	36448	1095	36448	-1095	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTCCTGGTCACTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	29128557	29124669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29125524_29127796_29127900_29128427
ENSMUSG00000029701.16_29124763_29128632_1	chr6	-	1069	3	ISM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	36373	1188	36373	-1188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAGCTTTCTGGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	29128632	29124762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29125524_29127796_29127900_29128427
ENSMUSG00000029701.16_29125004_29131742_1	chr6	-	1072	5	ISM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	33263	1429	33263	-1429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTTAAATCGGTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	29131742	29125003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625
ENSMUSG00000029701.16_29125180_29137642_1	chr6	-	1153	7	ISM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	27363	1605	27363	-1605	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCTCAAATGGAAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	29137642	29125179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577
ENSMUSG00000029701.16_29125376_29138620_1	chr6	-	1076	8	ISM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	26385	1801	26385	-1801	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTACAAAAGCCGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	29138620	29125375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501
ENSMUSG00000029701.16_29127818_29143637_1	chr6	-	1083	9	ISM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	21368	4243	21368	-4243	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTAGCGTCTTCCGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	29143637	29127817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552
ENSMUSG00000029701.16_29128524_29154877_1	chr6	-	1128	10	ISM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	10128	4949	10128	-4949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACCAAGGCTGAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	29154877	29128523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752
ENSMUSG00000029701.16_29131266_29155153_1	chr6	-	1110	10	ISM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	9852	7691	9852	-7691	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGAACCTAAATTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	29155153	29131265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025
ENSMUSG00000029701.16_29131691_29157128_1	chr6	-	1067	10	ISM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	7877	8116	7877	-8116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCATGCCCTCAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	29157128	29131690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066
ENSMUSG00000029701.16_29138502_29160155_1	chr6	-	1152	11	ISM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	4850	14927	4850	-14927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGTATCAGAAGAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	29160155	29138501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035
ENSMUSG00000029701.16_29143594_29164633_1	chr6	-	1084	10	ISM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	372	20019	372	-20019	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGAGTTGTCTTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	29164633	29143593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ENSMUSG00000029701.16_29155045_29165005_1	chr6	-	1155	7	ISM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	0	31470	0	-31470	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAGTGTGCACAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	29165005	29155044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ENSMUSG00000029703.11_136151626_136159904_1	chr5	-	1193	7	ISM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	5024	0	5024	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTTCTTGCTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	136159904	136151625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827
ENSMUSG00000029703.11_136151626_136159955_1	chr5	-	1244	7	ISM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	4973	0	4973	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTTCTTGCTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	136159955	136151625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827
ENSMUSG00000029703.11_136151738_136160014_1	chr5	-	1191	7	ISM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	4914	112	4914	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCCAGCTAGAGAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	136160014	136151737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827
ENSMUSG00000029703.11_136151921_136160984_1	chr5	-	1158	9	ISM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	3944	295	3944	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGTGGGAAATGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	136160984	136151920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965
ENSMUSG00000029703.11_136151929_136161027_1	chr5	-	1193	9	ISM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	3901	303	3901	-303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTGGAGGCCAGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	136161027	136151928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965
ENSMUSG00000029703.11_136151929_136161080_1	chr5	-	1246	9	ISM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	3848	303	3848	-303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTGGAGGCCAGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	136161080	136151928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965
ENSMUSG00000029703.11_136152034_136161176_1	chr5	-	1158	10	ISM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	3752	408	3752	-408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTCTGCCTGCACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	136161176	136152033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159
ENSMUSG00000029703.11_136152080_136161238_1	chr5	-	1174	10	ISM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	3690	454	3690	-454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTGCCCTGACAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	136161238	136152079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159
ENSMUSG00000029703.11_136152290_136161886_1	chr5	-	1153	10	ISM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	3042	664	3042	-664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGGCAACAACTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	136161886	136152289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828
ENSMUSG00000029703.11_136152546_136162299_1	chr5	-	1172	10	ISM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	2629	920	2629	-920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGACAGTCTGTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	136162299	136152545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158
ENSMUSG00000029703.11_136152721_136162904_1	chr5	-	1225	10	ISM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	2024	1095	2024	-1095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAGCCCAGCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	136162904	136152720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787
ENSMUSG00000029703.11_136159138_136163430_1	chr5	-	1148	10	ISM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	1498	7512	1498	-7512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGCTGTGAGGGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	136163430	136159137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352
ENSMUSG00000029703.11_136159173_136163514_1	chr5	-	1197	10	ISM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	1414	7547	1414	-7547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTTGCCACCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	136163514	136159172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352
ENSMUSG00000029703.11_136159886_136164851_1	chr5	-	1222	9	ISM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	77	8260	77	-8260	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGAAGGCCATTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	136164851	136159885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
ENSMUSG00000029703.11_136159939_136164884_1	chr5	-	1202	9	ISM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	44	8313	44	-8313	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCCGGCTGCTGCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	136164884	136159938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
ENSMUSG00000029705.18_136277364_136596117_1	chr5	-	2343	22	NNC	ENSMUSG00000029705.18	novel	2255	22	NA	NA	0	89	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTAGGCCCCAGGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	136596117	136277363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283033_136285081_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136596031
ENSMUSG00000029705.18_136277364_136596117_2	chr5	-	2344	22	FSM	ENSMUSG00000029705.18	ENST00000393824.7	2255	22	0	-89	0	89	multi-exon	FALSE	canonical	NA	NA	NA	NA	1540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTAGGCCCCAGGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	136596117	136277363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136596031
ENSMUSG00000029705.18_136303963_136308423_1	chr5	-	498	2	ISM	ENSMUSG00000029705.18	ENST00000550008.6	4386	22	285840	318	285840	-318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCCAAGCCTCGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	136308423	136303962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136304321_136308283
ENSMUSG00000029705.18_136311865_136334352_1	chr5	-	456	4	ISM	ENSMUSG00000029705.18	ENST00000550008.6	4386	22	259911	8220	259911	-8220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCGACCTCCTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	136334352	136311864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136311911_136315614_136315918_136333576_136333634_136334302
ENSMUSG00000029705.18_136315728_136336736_1	chr5	-	537	4	ISM	ENSMUSG00000029705.18	ENST00000550008.6	4386	22	257527	12083	257527	-12083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTGGACACTCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	136336736	136315727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136315918_136333576_136333634_136334302_136334469_136336612
ENSMUSG00000029705.18_136315812_136336777_1	chr5	-	494	4	ISM	ENSMUSG00000029705.18	ENST00000550008.6	4386	22	257486	12167	257486	-12167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCCATTGAGACCAGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	136336777	136315811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136315918_136333576_136333634_136334302_136334469_136336612
ENSMUSG00000029705.18_136333584_136336885_1	chr5	-	489	3	ISM	ENSMUSG00000029705.18	ENST00000550008.6	4386	22	257378	29939	257378	-29939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCAGGTAACTAGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	136336885	136333583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136333634_136334302_136334469_136336612
ENSMUSG00000029705.18_136334373_136337011_1	chr5	-	495	2	ISM	ENSMUSG00000029705.18	ENST00000550008.6	4386	22	257252	30728	257252	-30728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAGCTCTGGCTGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	136337011	136334372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136334469_136336612
ENSMUSG00000029705.18_136334425_136337068_1	chr5	-	500	2	ISM	ENSMUSG00000029705.18	ENST00000550008.6	4386	22	257195	30780	257195	-30780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAACCATGGAGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	136337068	136334424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136334469_136336612
ENSMUSG00000029705.18_136337084_136341611_1	chr5	-	480	2	ISM	ENSMUSG00000029705.18	ENST00000550008.6	4386	22	252652	33439	252652	-33439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGAGTGAGCTAGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	136341611	136337083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136337449_136341496
ENSMUSG00000029705.18_136337179_136341702_1	chr5	-	476	2	ISM	ENSMUSG00000029705.18	ENST00000550008.6	4386	22	252561	33534	252561	-33534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGTGCCCCAGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	136341702	136337178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136337449_136341496
ENSMUSG00000029705.18_136337240_136341783_1	chr5	-	496	2	ISM	ENSMUSG00000029705.18	ENST00000550008.6	4386	22	252480	33595	252480	-33595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCTCTTGCTATCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	136341783	136337239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136337449_136341496
ENSMUSG00000029705.18_136337390_136343219_1	chr5	-	484	3	ISM	ENSMUSG00000029705.18	ENST00000556210.1	4080	22	251044	33745	251044	-33745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCCTACAGCAGGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	136343219	136337389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136337449_136341496_136341863_136343160
ENSMUSG00000029705.18_136341653_136355663_1	chr5	-	475	5	ISM	ENSMUSG00000029705.18	ENST00000556210.1	4080	22	238600	38008	238600	-38008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTCGCAAGGCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	136355663	136341652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136341863_136343160_136343258_136344852_136344902_136348634_136348694_136355603
ENSMUSG00000029710.16_137355844_137364875_1	chr5	+	878	6	ISM	ENSMUSG00000029710.16	ENST00000616502.4	3695	14	7438	7919	7069	-7697	internal_fragment	TRUE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAGGGTGGCTACACCG	NA	NA	NA	NA	NA	NA	NA	NA	137355843	137364875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137356201_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802
ENSMUSG00000029710.16_137355898_137364935_1	chr5	+	884	6	ISM	ENSMUSG00000029710.16	ENST00000616502.4	3695	14	7492	7859	7123	-7637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAGTTCGAGCATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	137355897	137364935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137356201_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802
ENSMUSG00000029710.16_137369032_137372216_1	chr5	+	884	4	ISM	ENSMUSG00000029710.16	ENSMUST00000166239.8	3741	18	20340	356	20257	-356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAGACCAAAGAGAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	137369031	137372216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137369123_137370285_137370480_137370646_137370803_137371773
ENSMUSG00000029710.16_137370404_137372409_1	chr5	+	868	3	ISM	ENSMUSG00000029710.16	ENSMUST00000166239.8	3741	18	21712	163	21629	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGTTTTACTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	137370403	137372409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137370480_137370646_137370803_137371773
ENSMUSG00000029713.16_137526577_137528038_1	chr5	-	955	5	ISM	ENSMUSG00000029713.16	ENSMUST00000150063.9	1569	9	1521	-188	1521	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAATGGGGGAAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	137528038	137526576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864
ENSMUSG00000029713.16_137526765_137531446_1	chr5	-	866	7	FSM	ENSMUSG00000029713.16	ENSMUST00000143495.8	1285	7	47	372	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCCAACCCCAGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	137531446	137526764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137531400
ENSMUSG00000029713.16_137528151_137531446_1	chr5	-	359	5	ISM	ENSMUSG00000029713.16	ENSMUST00000031726.15	1860	10	326	1762	0	-1386	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGGAAAGCTCATCATTT	NA	NA	NA	NA	NA	NA	NA	NA	137531446	137528150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137528172_137528445_137528553_137528659_137528699_137528956_137529103_137531400
ENSMUSG00000029718.15_137603530_137605138_1	chr5	-	349	4	ISM	ENSMUSG00000029718.15	ENSMUST00000054564.13	1585	10	4500	160	4500	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTCCAGAGAGCTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	137605138	137603529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088
ENSMUSG00000029718.15_137603566_137605204_1	chr5	-	379	4	ISM	ENSMUSG00000029718.15	ENSMUST00000054564.13	1585	10	4434	196	4434	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGGTCAGGTGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	137605204	137603565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088
ENSMUSG00000029718.15_137603768_137605252_1	chr5	-	364	3	ISM	ENSMUSG00000029718.15	ENSMUST00000054564.13	1585	10	4386	398	4386	-391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1859	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGAAGTTGTATGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	137605252	137603767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137603890_137603984_137604063_137605088
ENSMUSG00000029718.15_137604024_137605713_1	chr5	-	364	3	ISM	ENSMUSG00000029718.15	ENSMUST00000054564.13	1585	10	3925	654	3925	-647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCACCTTGCAGAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	137605713	137604023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137604063_137605088_137605370_137605669
ENSMUSG00000029718.15_137605089_137605811_1	chr5	-	423	2	ISM	ENSMUSG00000029718.15	ENSMUST00000054564.13	1585	10	3827	1719	3827	-1712	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1699	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGTGAGAAGGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	137605811	137605088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137605370_137605669
ENSMUSG00000029718.15_137605280_137607224_1	chr5	-	424	4	ISM	ENSMUSG00000029718.15	ENST00000223061.6	1451	9	2446	1903	2414	-1903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCACGGGATGCCGTAG	NA	NA	NA	NA	NA	NA	NA	NA	137607224	137605279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137605370_137605669_137605807_137606216_137606342_137607152
ENSMUSG00000029718.15_137605772_137607411_1	chr5	-	419	3	ISM	ENSMUSG00000029718.15	ENST00000223061.6	1451	9	2259	2395	2227	-2395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACACGTACTGCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	137607411	137605771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137605807_137606216_137606342_137607152
ENSMUSG00000029718.15_137606279_137608736_1	chr5	-	400	3	ISM	ENSMUSG00000029718.15	ENST00000223061.6	1451	9	934	2902	902	-2902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTCGGATTACCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	137608736	137606278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137606342_137607152_137607412_137608658
ENSMUSG00000029718.15_137607201_137609608_1	chr5	-	430	3	ISM	ENSMUSG00000029718.15	ENSMUST00000054564.13	1585	10	30	3831	30	-3824	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGAGGCTTCCTGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	137609608	137607200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137607412_137608658_137608768_137609498
ENSMUSG00000029718.15_137608656_137609749_1	chr5	-	363	2	ISM	ENSMUSG00000029718.15	ENSMUST00000031731.14	1626	9	0	5291	0	-5279	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGGCCCCTCTGGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	137609749	137608655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137608768_137609498
ENSMUSG00000029723.17_137746040_137757407_1	chr5	+	371	4	ISM	ENSMUSG00000029723.17	ENSMUST00000100539.10	3983	5	1782	2263	1782	-287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGGAACGCTGCATTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	137746039	137757407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137746122_137749469_137749631_137756945_137756995_137757328
ENSMUSG00000029725.11_137777343_137778024_1	chr5	+	522	3	ISM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	177	348	177	-348	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGGAAGGGATGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	137777342	137778024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137777484_137777563_137777808_137777887
ENSMUSG00000029725.11_137777450_137778164_1	chr5	+	464	4	FSM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	284	208	284	-208	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGGTCCGAATCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	137777449	137778164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_137777484_137777563_137777808_137777887_137778025_137778115
ENSMUSG00000029725.11_137777699_137778372_1	chr5	+	503	3	ISM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	533	0	533	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCGAACTGTTCTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	137777698	137778372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137777808_137777887_137778025_137778115
ENSMUSG00000029730.17_138162845_138165034_1	chr5	-	707	4	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	4475	-25	4475	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAGAGTTTTTAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	138165034	138162844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944
ENSMUSG00000029730.17_138162970_138165401_1	chr5	-	670	5	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	4108	100	4108	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCCTCCTGCCTACACC	NA	NA	NA	NA	NA	NA	NA	NA	138165401	138162969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307
ENSMUSG00000029730.17_138163040_138165496_1	chr5	-	695	5	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	4013	170	4013	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGAGCTAAATGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	138165496	138163039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307
ENSMUSG00000029730.17_138163108_138165540_1	chr5	-	671	5	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	3969	238	3969	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCTGAACAGCGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	138165540	138163107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307
ENSMUSG00000029730.17_138163313_138165701_1	chr5	-	758	4	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	3808	443	3808	-443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGATTTTAATGAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	138165701	138163312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138163424_138164171_138164341_138164944_138165029_138165307
ENSMUSG00000029730.17_138164225_138166121_1	chr5	-	697	5	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	3388	1355	3388	-1355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATACTTCTGCCCGGACC	NA	NA	NA	NA	NA	NA	NA	NA	138166121	138164224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102
ENSMUSG00000029730.17_138164293_138166179_1	chr5	-	687	5	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	3330	1423	3330	-1423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTGACTACATCACCG	NA	NA	NA	NA	NA	NA	NA	NA	138166179	138164292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102
ENSMUSG00000029730.17_138164997_138166346_1	chr5	-	669	5	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	3163	2127	3163	-2127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCGGCAGCCCCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	138166346	138164996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319
ENSMUSG00000029730.17_138165402_138166635_1	chr5	-	672	5	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	2874	2532	2874	-2532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCAGAACGTCCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	138166635	138165401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594
ENSMUSG00000029730.17_138165453_138166685_1	chr5	-	671	5	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	2824	2583	2824	-2583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTGCGGCCAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	138166685	138165452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594
ENSMUSG00000029730.17_138165564_138167112_1	chr5	-	660	6	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	2397	2694	2397	-2694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACAAGATGGCCGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	138167112	138165563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071
ENSMUSG00000029730.17_138165589_138167193_1	chr5	-	716	6	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	2316	2719	2316	-2719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCGTGTGCTGCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	138167193	138165588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071
ENSMUSG00000029730.17_138165667_138167389_1	chr5	-	684	7	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	2120	2797	2120	-2797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCACAGCAGCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	138167389	138165666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359
ENSMUSG00000029730.17_138165877_138167519_1	chr5	-	715	6	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	1990	3007	1990	-3007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGAGACCCTGGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	138167519	138165876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359
ENSMUSG00000029730.17_138166177_138167663_1	chr5	-	695	6	ISM	ENSMUSG00000029730.17	ENSMUST00000000505.16	2962	15	3021	3332	1846	-3307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGAAGAAGGCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	138167663	138166176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610
ENSMUSG00000029730.17_138166718_138168658_1	chr5	-	716	6	ISM	ENSMUSG00000029730.17	ENSMUST00000148879.8	1351	9	1422	3856	851	-3848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGTAGCATCACAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	138168658	138166717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578
ENSMUSG00000029730.17_138167140_138170077_1	chr5	-	711	6	ISM	ENSMUSG00000029730.17	ENSMUST00000148879.8	1351	9	3	4278	3	-4270	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGCTGTACCTACAGACT	NA	NA	NA	NA	NA	NA	NA	NA	138170077	138167139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ENSMUSG00000029730.17_138167673_138170316_1	chr5	-	637	4	ISM	ENSMUSG00000029730.17	ENSMUST00000148879.8	1351	9	-236	4811	-236	-4803	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACCCTGGGGCAGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	138170316	138167672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138167736_138167821_138167987_138168578_138168659_138169987
ENSMUSG00000029730.17_138167673_138170360_1	chr5	-	681	4	ISM	ENSMUSG00000029730.17	ENSMUST00000148879.8	1351	9	-280	4811	-280	-4803	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACCCTGGGGCAGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	138170360	138167672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138167736_138167821_138167987_138168578_138168659_138169987
ENSMUSG00000029730.17_138167896_138169054_1	chr5	-	247	3	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	455	5026	455	-5026	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGCCAAGCGCTACTCA	NA	NA	NA	NA	NA	NA	NA	NA	138169054	138167895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138167987_138168578_138168659_138168978
ENSMUSG00000029730.17_138167908_138170496_1	chr5	-	668	3	ISM	ENSMUSG00000029730.17	ENSMUST00000000505.16	2962	15	188	5063	188	-5038	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAATTTGCGAGAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	138170496	138167907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138167987_138168578_138168659_138169987
ENSMUSG00000029730.17_138167951_138169116_1	chr5	-	254	3	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	393	5081	393	-5081	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGACCTGGATGACATAGC	NA	NA	NA	NA	NA	NA	NA	NA	138169116	138167950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138167987_138168578_138168659_138168978
ENSMUSG00000029735.18_43323208_43500892_1	chr6	-	821	5	FSM	ENSMUSG00000029735.18	ENST00000538212.6	821	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCTAACATCAGACTCCG	NA	NA	NA	NA	NA	NA	NA	NA	43500892	43323207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_43323498_43323586_43323835_43400554_43400667_43465808_43465905_43500817
ENSMUSG00000029735.18_43323429_43536911_1	chr6	-	633	6	ISM	ENSMUSG00000029735.18	ENST00000378099.7	1009	8	105830	221	-36019	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTCTATCAAAGCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	43536911	43323428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_43323498_43323586_43323835_43400554_43400667_43465808_43465905_43500817_43500891_43536876
ENSMUSG00000029735.18_43323623_43588319_1	chr6	-	635	6	ISM	ENSMUSG00000029735.18	ENST00000378099.7	1009	8	54422	415	54422	-415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAACTTCTCCATGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	43588319	43323622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_43323835_43400554_43400667_43465808_43465905_43500817_43500891_43536876_43536947_43588247
ENSMUSG00000029736.16_43281900_43283740_2	chr6	-	722	4	FSM	ENSMUSG00000029736.16	ENST00000645489.1	832	4	18	92	18	-92	multi-exon	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCATTTCCTTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	43283740	43281899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_43282104_43282437_43282733_43283212_43283344_43283648
ENSMUSG00000029752.13_7675169_7676049_1	chr6	-	413	2	ISM	ENSMUSG00000029752.13	ENST00000444334.5	1679	11	13402	-107	13402	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	7676049	7675168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_7675525_7675992
ENSMUSG00000029752.13_7675276_7689309_1	chr6	-	879	6	FSM	ENSMUSG00000029752.13	ENST00000641079.1	1068	6	189	0	142	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCTCTGAAGGTCGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	7689309	7675275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_7675525_7675992_7676149_7681249_7681378_7681933_7682036_7682270_7682457_7689251
ENSMUSG00000029752.13_7675354_7682456_1	chr6	-	1160	9	ISM	ENSMUSG00000029752.13	ENST00000444334.5	1679	11	6995	78	6995	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACTCTGACCCATTATAA	NA	NA	NA	NA	NA	NA	NA	NA	7682456	7675353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270
ENSMUSG00000029752.13_7675354_7689439_1	chr6	-	931	6	FSM	ENSMUSG00000029752.13	ENST00000641079.1	1068	6	59	78	12	-78	multi-exon	FALSE	canonical	NA	NA	NA	NA	2396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACTCTGACCCATTATAA	NA	NA	NA	NA	NA	NA	NA	NA	7689439	7675353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_7675525_7675992_7676149_7681249_7681378_7681933_7682036_7682270_7682457_7689251
ENSMUSG00000029752.13_7675354_7689439_2	chr6	-	930	6	NNC	ENSMUSG00000029752.13	novel	1068	6	NA	NA	12	-78	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACTCTGACCCATTATAA	NA	NA	NA	NA	NA	NA	NA	NA	7689439	7675353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_7675525_7675992_7676149_7681250_7681378_7681933_7682036_7682270_7682457_7689251
ENSMUSG00000029752.13_7675470_7685185_1	chr6	-	1061	10	ISM	ENSMUSG00000029752.13	ENST00000444334.5	1679	11	4266	194	4266	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGGAAGGCTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	7685185	7675469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168
ENSMUSG00000029752.13_7675470_7685228_1	chr6	-	1104	10	ISM	ENSMUSG00000029752.13	ENST00000444334.5	1679	11	4223	194	4223	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGGAAGGCTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	7685228	7675469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168
ENSMUSG00000029752.13_7675470_7685301_1	chr6	-	1177	10	ISM	ENSMUSG00000029752.13	ENST00000444334.5	1679	11	4150	194	4150	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGGAAGGCTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	7685301	7675469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168
ENSMUSG00000029752.13_7675470_7689439_1	chr6	-	815	6	FSM	ENSMUSG00000029752.13	ENST00000641079.1	1068	6	59	194	12	-194	multi-exon	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGGAAGGCTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	7689439	7675469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_7675525_7675992_7676149_7681249_7681378_7681933_7682036_7682270_7682457_7689251
ENSMUSG00000029752.13_7682417_7689316_1	chr6	-	343	3	ISM	ENSMUSG00000029752.13	ENSMUST00000115542.8	2016	12	3555	7248	135	2752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGAGCCCTTCCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	7689316	7682416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_7682457_7685168_7685407_7689251
ENSMUSG00000029752.13_7685182_7689309_1	chr6	-	286	2	FSM	ENSMUSG00000029752.13	ENST00000623201.1	489	2	190	13	142	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGAAGCTAAAGGTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	7689309	7685181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_7685401_7689242
ENSMUSG00000029752.13_7685274_7689439_1	chr6	-	324	2	FSM	ENSMUSG00000029752.13	ENST00000623201.1	489	2	60	105	12	-105	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCCAATAAGAAAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	7689439	7685273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_7685401_7689242
ENSMUSG00000029752.13_7685274_7689439_2	chr6	-	321	2	ISM	ENSMUSG00000029752.13	ENSMUST00000115542.8	2016	12	3432	10105	12	-105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCCAATAAGAAAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	7689439	7685273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_7685407_7689251
ENSMUSG00000029757.17_5757419_5961908_1	chr6	+	945	9	ISM	ENSMUSG00000029757.17	ENSMUST00000115554.4	2518	16	31607	66131	31607	-66122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATTGTCCTCTGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	5757418	5961908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_5757495_5767029_5767145_5769700_5769792_5800774_5800891_5905104_5905195_5913315_5913479_5915829_5915930_5923164_5923291_5961840
ENSMUSG00000029757.17_6006268_6028039_1	chr6	+	937	3	ISM	ENSMUSG00000029757.17	ENSMUST00000115554.4	2518	16	280456	0	280456	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGGACTCTATTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	6006267	6028039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_6006411_6010454_6010581_6027371
ENSMUSG00000029759.10_5220852_5232379_1	chr6	-	1138	4	ISM	ENSMUSG00000029759.10	ENSMUST00000031773.9	1837	9	23907	0	13950	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATGAAAAAAAATATATG	NA	NA	NA	NA	NA	NA	NA	NA	5232379	5220851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323
ENSMUSG00000029759.10_5220852_5232440_1	chr6	-	1199	4	ISM	ENSMUSG00000029759.10	ENSMUST00000031773.9	1837	9	23846	0	13889	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATGAAAAAAAATATATG	NA	NA	NA	NA	NA	NA	NA	NA	5232440	5220851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323
ENSMUSG00000029759.10_5221019_5236911_1	chr6	-	1156	5	ISM	ENSMUSG00000029759.10	ENSMUST00000031773.9	1837	9	19375	167	9418	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTTGAATAAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	5236911	5221018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323_5232525_5236871
ENSMUSG00000029759.10_5221128_5240838_1	chr6	-	1160	6	ISM	ENSMUSG00000029759.10	ENSMUST00000031773.9	1837	9	15448	276	5491	-276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTAAACTCTAAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	5240838	5221127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323_5232525_5236871_5236999_5240812
ENSMUSG00000029759.10_5221195_5240902_1	chr6	-	1157	6	ISM	ENSMUSG00000029759.10	ENSMUST00000031773.9	1837	9	15384	343	5427	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACGATTCCCATTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	5240902	5221194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323_5232525_5236871_5236999_5240812
ENSMUSG00000029759.10_5221370_5254564_1	chr6	-	1163	8	ISM	ENSMUSG00000029759.10	ENSMUST00000031773.9	1837	9	1722	518	1722	193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTGTATGTGCCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	5254564	5221369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323_5232525_5236871_5236999_5240812_5240979_5246277_5246334_5254515
ENSMUSG00000029759.10_5221628_5236961_1	chr6	-	386	3	ISM	ENSMUSG00000029759.10	ENST00000427422.5	706	5	9368	65	9368	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATCATAAGAGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	5236961	5221627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_5221723_5232323_5232525_5236871
ENSMUSG00000029759.10_5221704_5240845_1	chr6	-	380	4	ISM	ENSMUSG00000029759.10	ENST00000427422.5	706	5	5484	141	5484	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTCAGATAAGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	5240845	5221703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_5221723_5232323_5232525_5236871_5236999_5240812
ENSMUSG00000029761.17_34575435_34751776_1	chr6	+	3514	14	FSM	ENSMUSG00000029761.17	ENSMUST00000079391.10	4127	14	0	613	0	-613	multi-exon	FALSE	canonical	NA	NA	NA	NA	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGGTTGGCCTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34575434	34751776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_34575601_34639062_34639152_34662897_34663010_34718723_34718871_34722553_34722951_34730377_34730524_34732574_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ENSMUSG00000029761.17_34575555_34751776_1	chr6	+	3394	14	FSM	ENSMUSG00000029761.17	ENSMUST00000079391.10	4127	14	120	613	55	-613	multi-exon	FALSE	canonical	NA	NA	NA	NA	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGGTTGGCCTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34575554	34751776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_34575601_34639062_34639152_34662897_34663010_34718723_34718871_34722553_34722951_34730377_34730524_34732574_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ENSMUSG00000029761.17_34662898_34752030_1	chr6	+	3513	12	ISM	ENSMUSG00000029761.17	ENSMUST00000079391.10	4127	14	87463	359	-23479	-359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTTAATGAGGCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	34662897	34752030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_34663010_34718723_34718871_34722553_34722951_34730377_34730524_34732574_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ENSMUSG00000029761.17_34686425_34732742_1	chr6	+	1072	5	ISM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	48	19666	48	-17887	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAAGAGGGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	34686424	34732742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_34686633_34718723_34718871_34722553_34722951_34730377_34730524_34732568
ENSMUSG00000029761.17_34718784_34735059_1	chr6	+	1036	5	ISM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	32407	17349	32215	-15570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTTCCCAGAAATACTT	NA	NA	NA	NA	NA	NA	NA	NA	34718783	34735059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_34718871_34722553_34722951_34730377_34730524_34732568_34732834_34734918
ENSMUSG00000029761.17_34722551_34739088_1	chr6	+	996	5	ISM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	36174	13320	35982	-11541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATAGAGTTGACTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	34722550	34739088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_34722951_34730377_34730524_34732568_34732834_34734918_34735060_34739044
ENSMUSG00000029761.17_34722551_34752389_1	chr6	+	3616	10	ISM	ENSMUSG00000029761.17	ENSMUST00000079391.10	4127	14	147116	0	35982	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTCTTCCAGATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	34722550	34752389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_34722951_34730377_34730524_34732574_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ENSMUSG00000029761.17_34722578_34751138_1	chr6	+	3040	11	ISM	ENSMUSG00000029761.17	ENSMUST00000115027.8	4777	15	147079	1263	36009	509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATCTGGACAAAGCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	34722577	34751138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_34723575_34724826_34724905_34730377_34730524_34732574_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ENSMUSG00000029761.17_34722754_34742028_1	chr6	+	1010	7	ISM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	36377	10380	36185	-8601	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGGGCGTGGCTCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	34722753	34742028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_34722951_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890
ENSMUSG00000029761.17_34722754_34752389_1	chr6	+	3413	10	ISM	ENSMUSG00000029761.17	ENSMUST00000079391.10	4127	14	147319	0	36185	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTCTTCCAGATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	34722753	34752389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_34722951_34730377_34730524_34732574_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ENSMUSG00000029761.17_34722887_34743133_1	chr6	+	973	8	ISM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	36510	9275	36318	-7496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGCCCAGGGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	34722886	34743133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_34722951_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037
ENSMUSG00000029761.17_34722887_34752389_1	chr6	+	3280	10	ISM	ENSMUSG00000029761.17	ENSMUST00000079391.10	4127	14	147452	0	36318	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTCTTCCAGATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	34722886	34752389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_34722951_34730377_34730524_34732574_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ENSMUSG00000029761.17_34730466_34750199_1	chr6	+	944	9	ISM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	44089	2209	43897	-430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCCAGCTCAGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	34730465	34750199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ENSMUSG00000029761.17_34732639_34750329_1	chr6	+	946	8	ISM	ENSMUSG00000029761.17	ENSMUST00000031775.13	2142	13	46070	300	46070	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGCAGAGGAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	34732638	34750329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ENSMUSG00000029762.7_34331054_34345398_1	chr6	+	1353	10	NNC	ENSMUSG00000029762.7	novel	1358	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAAGTGATTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	34331053	34345398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_34331232_34333190_34333359_34334395_34334513_34335065_34335144_34340266_34340390_34340656_34340764_34341171_34341254_34342141_34342226_34342837_34342921_34345065
ENSMUSG00000029762.7_34331054_34345398_2	chr6	+	1351	10	NNC	ENSMUSG00000029762.7	novel	1358	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAAGTGATTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	34331053	34345398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_34331232_34333190_34333359_34334395_34334513_34335065_34335144_34340266_34340390_34340656_34340764_34341178_34341254_34342141_34342226_34342837_34342921_34345060
ENSMUSG00000029762.7_34331054_34345398_3	chr6	+	1349	10	NNC	ENSMUSG00000029762.7	novel	1358	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2089	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAAGTGATTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	34331053	34345398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_34331232_34333190_34333359_34334395_34334513_34335065_34335144_34340275_34340390_34340656_34340764_34341171_34341254_34342141_34342226_34342837_34342921_34345060
ENSMUSG00000029762.7_34331054_34345398_4	chr6	+	1352	10	NNC	ENSMUSG00000029762.7	novel	1358	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAAGTGATTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	34331053	34345398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_34331232_34333190_34333359_34334395_34334513_34335065_34335144_34340266_34340390_34340662_34340764_34341171_34341254_34342141_34342226_34342837_34342921_34345060
ENSMUSG00000029763.18_33273725_33815989_1	chr6	+	1426	10	ISM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	47705	134925	47658	-134925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGCCAAACTGGACTAAC	NA	NA	NA	NA	NA	NA	NA	NA	33273724	33815989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909
ENSMUSG00000029763.18_33309184_33839174_1	chr6	+	1405	9	ISM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	83164	111740	83117	-111740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGCCCTGGGGGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	33309183	33839174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995
ENSMUSG00000029763.18_33415333_33898409_1	chr6	+	1424	10	ISM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	189313	52505	189266	-52505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTCAGCAGAACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	33415332	33898409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312
ENSMUSG00000029763.18_33735017_33949209_1	chr6	+	1419	8	ISM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	508997	1705	508950	-1705	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTTCTCTTTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	33735016	33949209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
ENSMUSG00000029763.18_33792674_33949386_1	chr6	+	1426	7	ISM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	566654	1528	566607	-1528	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGGACCATCCTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	33792673	33949386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
ENSMUSG00000029763.18_33887455_33949803_1	chr6	+	1404	4	ISM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	661435	1111	661388	-1111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACATGCACGTGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	33887454	33949803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_33887565_33895335_33895515_33898312_33898473_33948848
ENSMUSG00000029763.18_33887501_33949888_1	chr6	+	1443	4	ISM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	661481	1026	661434	-1026	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATTGCTAAAAATAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	33887500	33949888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_33887565_33895335_33895515_33898312_33898473_33948848
ENSMUSG00000029763.18_33898372_33950191_1	chr6	+	1444	2	ISM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	672352	723	672305	-723	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTGCAGTCCAGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	33898371	33950191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_33898473_33948848
ENSMUSG00000029767.17_29348118_29374705_1	chr6	+	1047	6	FSM	ENSMUSG00000029767.17	ENSMUST00000172974.8	3063	6	50	1966	0	203	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTACACTTGTGTCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	29348117	29374705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29374397
ENSMUSG00000029767.17_29348118_29375144_1	chr6	+	1686	7	FSM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	13	1530	0	642	multi-exon	FALSE	canonical	NA	NA	NA	NA	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTCTAATTTTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	29348117	29375144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ENSMUSG00000029767.17_29356470_29375256_1	chr6	+	1708	6	ISM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	8365	1418	8352	754	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAGCTGTTTCCAACTA	NA	NA	NA	NA	NA	NA	NA	NA	29356469	29375256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ENSMUSG00000029767.17_29361292_29375024_1	chr6	+	1050	4	ISM	ENSMUSG00000029767.17	ENST00000535011.6	3064	6	13224	1644	13174	522	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTCGGTTGTCATAGGC	NA	NA	NA	NA	NA	NA	NA	NA	29361291	29375024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29361487_29366038_29366206_29366915_29366977_29374397
ENSMUSG00000029767.17_29361331_29375462_1	chr6	+	1649	5	ISM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	13226	1212	13213	-666	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAATTGGACTAAGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	29361330	29375462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ENSMUSG00000029767.17_29366036_29375256_1	chr6	+	1090	3	ISM	ENSMUSG00000029767.17	ENST00000535011.6	3064	6	17968	1412	17918	754	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAGCTGTTTCCAACTA	NA	NA	NA	NA	NA	NA	NA	NA	29366035	29375256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29366206_29366915_29366977_29374397
ENSMUSG00000029767.17_29366068_29375670_1	chr6	+	1672	4	ISM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	17950	458	17950	-458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACTCTTCTCCCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	29366067	29375670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29366206_29366915_29366977_29372469_29372670_29374397
ENSMUSG00000029767.17_29366134_29375707_1	chr6	+	1643	4	ISM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	18016	421	18016	-421	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCCTCAAGGATAG	NA	NA	NA	NA	NA	NA	NA	NA	29366133	29375707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29366206_29366915_29366977_29372469_29372670_29374397
ENSMUSG00000029767.17_29372552_29375901_1	chr6	+	1622	2	ISM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	24434	227	24434	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGAGTTGATGGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	29372551	29375901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29372670_29374397
ENSMUSG00000029767.17_29372552_29375937_1	chr6	+	1658	2	ISM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	24434	191	24434	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGTCTTTAACCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	29372551	29375937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29372670_29374397
ENSMUSG00000029767.17_29372552_29375987_1	chr6	+	1708	2	ISM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	24434	141	24434	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTACTTCCTATATCT	NA	NA	NA	NA	NA	NA	NA	NA	29372551	29375987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29372670_29374397
ENSMUSG00000029769.17_29397311_29411361_1	chr6	+	1316	7	ISM	ENSMUSG00000029769.17	ENST00000487361.5	2118	11	0	15577	0	-15495	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGACCTCCCACAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	29397310	29411361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29397586_29399199_29399449_29399533_29399609_29405869_29406191_29409223_29409336_29410072_29410242_29411246
ENSMUSG00000029769.17_29397433_29411768_1	chr6	+	1277	8	ISM	ENSMUSG00000029769.17	ENST00000297788.9	3998	18	122	15181	122	-15088	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACAGTGAGCTTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	29397432	29411768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29397586_29399199_29399449_29399533_29399609_29405869_29406191_29409223_29409336_29410072_29410242_29411246_29411385_29411708
ENSMUSG00000029769.17_29397433_29411823_1	chr6	+	1332	8	ISM	ENSMUSG00000029769.17	ENST00000297788.9	3998	18	122	15126	122	-15033	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTCCTCAGATGCACT	NA	NA	NA	NA	NA	NA	NA	NA	29397432	29411823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29397586_29399199_29399449_29399533_29399609_29405869_29406191_29409223_29409336_29410072_29410242_29411246_29411385_29411708
ENSMUSG00000029769.17_29411330_29412917_1	chr6	+	243	3	ISM	ENSMUSG00000029769.17	ENST00000487361.5	2118	11	14019	14021	8462	-13939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTTCAGGAGATGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	29411329	29412917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29411385_29412362_29412534_29412900
ENSMUSG00000029769.17_29412964_29426642_1	chr6	+	249	3	ISM	ENSMUSG00000029769.17	ENST00000487361.5	2118	11	15653	296	10096	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTATGGTTTTCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	29412963	29426642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29413087_29421989_29422097_29426623
ENSMUSG00000029769.17_29413018_29426689_1	chr6	+	242	3	ISM	ENSMUSG00000029769.17	ENST00000487361.5	2118	11	15707	249	10150	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATATGCGACCGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	29413017	29426689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29413087_29421989_29422097_29426623
ENSMUSG00000029769.17_29414838_29419296_1	chr6	+	1292	5	ISM	ENSMUSG00000029769.17	ENSMUST00000154619.5	3356	15	11970	7560	11970	-7560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACAAGAATGCCAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	29414837	29419296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29414980_29415429_29415655_29417070_29417578_29417930_29418153_29419100
ENSMUSG00000029769.17_29415517_29420113_1	chr6	+	1277	5	ISM	ENSMUSG00000029769.17	ENSMUST00000154619.5	3356	15	12649	6743	12649	-6743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGCTACTAATCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	29415516	29420113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29415655_29417070_29417578_29417930_29418153_29419100_29419383_29419985
ENSMUSG00000029769.17_29415567_29420170_1	chr6	+	1284	5	ISM	ENSMUSG00000029769.17	ENSMUST00000154619.5	3356	15	12699	6686	12699	-6686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAAAACTTTGAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	29415566	29420170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29415655_29417070_29417578_29417930_29418153_29419100_29419383_29419985
ENSMUSG00000029769.17_29417148_29422062_1	chr6	+	1286	5	ISM	ENSMUSG00000029769.17	ENST00000297788.9	3998	18	19837	4887	14280	-4794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTGGTGGGCTGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	29417147	29422062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29417578_29417930_29418153_29419100_29419383_29419985_29420265_29421989
ENSMUSG00000029769.17_29417356_29426856_1	chr6	+	1345	6	ISM	ENSMUSG00000029769.17	ENST00000297788.9	3998	18	20045	93	14488	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGGAAAGGCTTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	29417355	29426856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29417578_29417930_29418153_29419100_29419383_29419985_29420265_29421989_29422097_29426623
ENSMUSG00000029769.17_29417408_29426863_1	chr6	+	1300	6	ISM	ENSMUSG00000029769.17	ENST00000297788.9	3998	18	20097	86	14540	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTTATGGGAGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	29417407	29426863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29417578_29417930_29418153_29419100_29419383_29419985_29420265_29421989_29422097_29426623
ENSMUSG00000029769.17_29417473_29426947_1	chr6	+	1319	6	ISM	ENSMUSG00000029769.17	ENST00000297788.9	3998	18	20162	2	14605	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGAGACATTGTGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	29417472	29426947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_29417578_29417930_29418153_29419100_29419383_29419985_29420265_29421989_29422097_29426623
ENSMUSG00000029776.12_52523884_52525832_1	chr6	-	197	2	ISM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	91542	671	91542	-671	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGAGGACGTGGACGCTG	NA	NA	NA	NA	NA	NA	NA	NA	52525832	52523883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_52524048_52525799
ENSMUSG00000029776.12_52523935_52525886_1	chr6	-	200	2	ISM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	91488	722	91488	-722	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCATCTGTGTTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	52525886	52523934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_52524048_52525799
ENSMUSG00000029776.12_52534860_52599871_1	chr6	-	196	3	ISM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	17503	11647	17503	-11647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGAGGAGTTGAAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	52599871	52534859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_52534898_52596961_52597084_52599835
ENSMUSG00000029776.12_52599836_52607243_1	chr6	-	180	2	ISM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	10131	76623	10131	-76623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTATTTCTCAAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	52607243	52599835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_52599946_52607173
ENSMUSG00000029777.11_55014992_55038048_1	chr6	+	1041	8	ISM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	0	18437	0	-18437	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGGTGTCGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	55014991	55038048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893
ENSMUSG00000029777.11_55015116_55040148_1	chr6	+	985	9	ISM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	124	16337	124	-16337	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGACCTCTGCCTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	55015115	55040148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075
ENSMUSG00000029777.11_55023439_55042500_1	chr6	+	1000	9	ISM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	8447	13985	8447	-13985	internal_fragment	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCTCCTGATAAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	55023438	55042500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432
ENSMUSG00000029777.11_55025048_55045077_1	chr6	+	1071	9	ISM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	10056	11408	10056	-11408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTACGACCTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	55025047	55045077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045
ENSMUSG00000029777.11_55027393_55046358_1	chr6	+	985	9	ISM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	12401	10127	12401	-10127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCGCCGTGGGCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	55027392	55046358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045154_55046325
ENSMUSG00000029777.11_55027408_55046376_1	chr6	+	990	9	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	12416	-10109	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGTACAAGAAGGATGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	55027407	55046376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045163_55046332
ENSMUSG00000029777.11_55027417_55046452_1	chr6	+	1055	9	ISM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	12425	10033	12425	-10033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCTGAGTGAGAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	55027416	55046452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045154_55046325
ENSMUSG00000029777.11_55030112_55050409_1	chr6	+	1043	8	ISM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	15120	6076	15120	-6076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATTTATTAGATCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	55030111	55050409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045154_55046325_55046472_55050323
ENSMUSG00000029777.11_55032733_55052476_1	chr6	+	1076	8	ISM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	17741	4009	17741	-4009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCTGCCCCGAAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	55032732	55052476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045154_55046325_55046472_55050323_55050410_55052366
ENSMUSG00000029777.11_55032835_55053964_1	chr6	+	999	9	ISM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	17843	2521	17843	-2521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTCAAATGTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	55032834	55053964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045154_55046325_55046472_55050323_55050410_55052366_55052477_55053939
ENSMUSG00000029777.11_55037906_55054591_1	chr6	+	1034	9	ISM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	22914	1894	22914	-1894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTCATAAAGTCGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	55037905	55054591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_55038044_55040075_55040239_55042432_55042598_55045045_55045154_55046325_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567
ENSMUSG00000029777.11_55037975_55054623_1	chr6	+	999	9	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	22983	-1862	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGAAGGCGCTATGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	55037974	55054623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_55038044_55040075_55040239_55042432_55042598_55045045_55045163_55046332_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567
ENSMUSG00000029777.11_55040120_55056219_1	chr6	+	1034	9	ISM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	25128	266	25128	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGTCCGCGATCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	55040119	55056219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_55040239_55042432_55042598_55045045_55045154_55046325_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ENSMUSG00000029777.11_55040179_55056246_1	chr6	+	1004	9	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	25187	-239	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTACCTGGGCTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	55040178	55056246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_55040239_55042432_55042598_55045045_55045163_55046332_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ENSMUSG00000029777.11_55040201_55056260_1	chr6	+	994	9	ISM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	25209	225	25209	-225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGGAGGCCAGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	55040200	55056260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_55040239_55042432_55042598_55045045_55045154_55046325_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ENSMUSG00000029777.11_55042516_55056376_1	chr6	+	989	8	ISM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	27524	109	27524	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCACTACACAGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	55042515	55056376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_55042598_55045045_55045154_55046325_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ENSMUSG00000029777.11_55042538_55056485_1	chr6	+	1078	8	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	27546	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATCTGTTGTGTTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	55042537	55056485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_55042598_55045045_55045163_55046332_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ENSMUSG00000029777.11_55042551_55056485_1	chr6	+	1063	8	ISM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	27559	0	27559	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATCTGTTGTGTTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	55042550	55056485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_55042598_55045045_55045154_55046325_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ENSMUSG00000029780.15_56859544_56860713_1	chr6	-	554	2	ISM	ENSMUSG00000029780.15	ENSMUST00000101367.9	1519	10	18158	159	18158	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCATCTTCTGAAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	56860713	56859543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_56860044_56860659
ENSMUSG00000029780.15_56859597_56860767_1	chr6	-	555	2	ISM	ENSMUSG00000029780.15	ENSMUST00000101367.9	1519	10	18104	212	18104	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCCTGATTTTAACCA	NA	NA	NA	NA	NA	NA	NA	NA	56860767	56859596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_56860044_56860659
ENSMUSG00000029780.15_56859648_56860836_1	chr6	-	573	2	ISM	ENSMUSG00000029780.15	ENSMUST00000101367.9	1519	10	18035	263	18035	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTCCCAGGTGGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	56860836	56859647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_56860044_56860659
ENSMUSG00000029780.15_56859801_56861804_1	chr6	-	555	3	ISM	ENSMUSG00000029780.15	ENSMUST00000101367.9	1519	10	17067	416	17067	-416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACCTGTGAACCACGGC	NA	NA	NA	NA	NA	NA	NA	NA	56861804	56859800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_56860044_56860659_56860861_56861693
ENSMUSG00000029780.15_56861776_56900806_1	chr6	-	623	7	ISM	ENSMUSG00000029780.15	ENSMUST00000031793.8	1676	9	111	2391	111	-2391	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAAGAAGTTATCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	56900806	56861775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56900656
ENSMUSG00000029781.8_56809044_56826678_1	chr6	+	425	2	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	0	29665	0	-29665	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGGACCAAGCTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	56809043	56826678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_56809413_56826622
ENSMUSG00000029781.8_56809218_56827645_1	chr6	+	439	3	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	174	28698	174	-28698	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCAGTTGCCCTCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	56809217	56827645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_56809413_56826622_56826769_56827547
ENSMUSG00000029781.8_56809360_56828374_1	chr6	+	417	4	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	316	27969	316	-27969	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTGGGGATTGGATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	56809359	56828374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346
ENSMUSG00000029781.8_56826720_56833259_1	chr6	+	427	4	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	17676	23084	17676	-23084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTTGGACCTCCATAAC	NA	NA	NA	NA	NA	NA	NA	NA	56826719	56833259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_56826769_56827547_56827738_56828346_56828493_56833217
ENSMUSG00000029781.8_56827601_56833346_1	chr6	+	412	3	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	18557	22997	18557	-22997	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTTCCTCAGGTATCAT	NA	NA	NA	NA	NA	NA	NA	NA	56827600	56833346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_56827738_56828346_56828493_56833217
ENSMUSG00000029781.8_56827669_56837676_1	chr6	+	441	4	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	18625	18667	18625	-18667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCTATGTGATTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	56827668	56837676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_56827738_56828346_56828493_56833217_56833408_56837640
ENSMUSG00000029781.8_56827719_56837755_1	chr6	+	470	4	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	18675	18588	18675	-18588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACCTGGGCTACGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	56827718	56837755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_56827738_56828346_56828493_56833217_56833408_56837640
ENSMUSG00000029781.8_56828432_56845723_1	chr6	+	416	4	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	19388	10620	19388	-10620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCTGGTGTTCGACATCC	NA	NA	NA	NA	NA	NA	NA	NA	56828431	56845723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_56828493_56833217_56833408_56837640_56837787_56845704
ENSMUSG00000029781.8_56833288_56845891_1	chr6	+	453	3	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	24244	10452	24244	-10452	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGTATCTGGGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	56833287	56845891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_56833408_56837640_56837787_56845704
ENSMUSG00000029781.8_56837726_56852691_1	chr6	+	432	4	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	28682	3652	28682	-3652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGAACTGCTGGAGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	56837725	56852691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_56837787_56845704_56845892_56850351_56850498_56852653
ENSMUSG00000029781.8_56845822_56855081_1	chr6	+	443	4	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	36778	1262	36778	-1262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGAAATGATCGTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	56845821	56855081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_56845892_56850351_56850498_56852653_56852818_56855018
ENSMUSG00000029781.8_56845877_56855129_1	chr6	+	436	4	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	36833	1214	36833	-1214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGAAGGTCACGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	56845876	56855129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_56845892_56850351_56850498_56852653_56852818_56855018
ENSMUSG00000029781.8_56852746_56855357_1	chr6	+	411	2	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	43702	986	43702	-986	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGGTGAGGACTTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	56852745	56855357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_56852818_56855018
ENSMUSG00000029782.21_30482084_30489517_1	chr6	-	1116	4	ISM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	20200	-330	20197	330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATTTTCGAGACAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	30489517	30482083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474
ENSMUSG00000029782.21_30482161_30489556_1	chr6	-	1078	4	ISM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	20161	-253	20158	253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTGTACATAGATAGG	NA	NA	NA	NA	NA	NA	NA	NA	30489556	30482160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474
ENSMUSG00000029782.21_30482270_30491145_1	chr6	-	1062	5	ISM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	18572	-144	18569	144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTATCATCAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	30491145	30482269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085
ENSMUSG00000029782.21_30482414_30494799_1	chr6	-	1145	7	ISM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	14918	0	14915	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTGAAAGGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	30494799	30482413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736
ENSMUSG00000029782.21_30482574_30497207_1	chr6	-	1061	8	ISM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	12510	160	12507	-160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCTTTGTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	30497207	30482573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165
ENSMUSG00000029782.21_30482800_30501968_1	chr6	-	1110	10	ISM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	7749	386	7746	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAAGCTGTGGGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	30501968	30482799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899
ENSMUSG00000029782.21_30482800_30502015_1	chr6	-	1157	10	ISM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	7702	386	7699	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAAGCTGTGGGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	30502015	30482799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899
ENSMUSG00000029782.21_30489370_30505923_1	chr6	-	1098	9	ISM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	3794	6956	3791	-6570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATTTATCAGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	30505923	30489369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731
ENSMUSG00000029782.21_30491086_30506916_1	chr6	-	1145	8	ISM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	2801	8672	2798	-8286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTCTTAGTTAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	30506916	30491085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784
ENSMUSG00000029782.21_30492691_30508736_1	chr6	-	1083	9	ISM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	981	10277	978	-9891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTCAGAGCTCCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	30508736	30492690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664
ENSMUSG00000029790.17_30655008_30657321_1	chr6	-	1092	3	ISM	ENSMUSG00000029790.17	ENST00000676243.1	2447	11	36416	554	36354	430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCTGAGAGCCTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	30657321	30655007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30655850_30656477_30656694_30657287
ENSMUSG00000029790.17_30655151_30658406_1	chr6	-	1090	4	ISM	ENSMUSG00000029790.17	ENST00000676243.1	2447	11	35331	697	35269	287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCATCTTGCTGGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	30658406	30655150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30655850_30656477_30656694_30657287_30657412_30658355
ENSMUSG00000029790.17_30655278_30658883_1	chr6	-	1092	5	ISM	ENSMUSG00000029790.17	ENST00000676243.1	2447	11	34854	824	34792	160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCCCACAGGTGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	30658883	30655277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30655850_30656477_30656694_30657287_30657412_30658355_30658424_30658771
ENSMUSG00000029790.17_30655531_30666336_1	chr6	-	1095	7	ISM	ENSMUSG00000029790.17	ENST00000676243.1	2447	11	27401	1077	27339	-93	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATGACCACAAAAACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	30666336	30655530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30655850_30656477_30656694_30657287_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265
ENSMUSG00000029790.17_30655531_30667436_1	chr6	-	926	7	ISM	ENSMUSG00000029790.17	ENST00000675962.1	1161	9	26272	93	26239	-93	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATGACCACAAAAACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	30667436	30655530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30655850_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379
ENSMUSG00000029790.17_30655699_30657411_1	chr6	-	482	3	ISM	ENSMUSG00000029790.17	ENST00000675563.1	1122	10	36319	0	36264	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTGTTTACTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	30657411	30655698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30655850_30656477_30656694_30657296
ENSMUSG00000029790.17_30655699_30660941_1	chr6	-	568	5	ISM	ENSMUSG00000029790.17	ENST00000343969.10	957	10	32767	0	32734	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTGTTTACTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	30660941	30655698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30655850_30657287_30657412_30658355_30658424_30658771_30658924_30660868
ENSMUSG00000029790.17_30655699_30693675_1	chr6	-	867	9	FSM	ENSMUSG00000029790.17	ENST00000675962.1	1161	9	33	261	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTGTTTACTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	30693675	30655698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_30655850_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30680129_30680194_30693635
ENSMUSG00000029790.17_30655699_30693675_2	chr6	-	1140	11	FSM	ENSMUSG00000029790.17	ENST00000676243.1	2447	11	62	1245	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTGTTTACTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	30693675	30655698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_30655850_30656477_30656694_30657287_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
ENSMUSG00000029790.17_30655792_30658854_1	chr6	-	540	5	ISM	ENSMUSG00000029790.17	ENST00000675563.1	1122	10	34876	93	34821	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAGAACCTGCCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	30658854	30655791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771
ENSMUSG00000029790.17_30656647_30660930_1	chr6	-	435	5	ISM	ENSMUSG00000029790.17	ENST00000675935.1	1229	11	32852	948	32745	-948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCAGCCTCTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	30660930	30656646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30656694_30657296_30657412_30658355_30658424_30658771_30658915_30660868
ENSMUSG00000029790.17_30657295_30666336_1	chr6	-	544	5	ISM	ENSMUSG00000029790.17	ENST00000675935.1	1229	11	27446	1596	27339	-1596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAAAGTTGCAGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	30666336	30657294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30657412_30658355_30658424_30658771_30658915_30660868_30661014_30666265
ENSMUSG00000029790.17_30658381_30667441_1	chr6	-	463	5	ISM	ENSMUSG00000029790.17	ENST00000675935.1	1229	11	26341	2682	26234	-2682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCAAATGACATTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	30667441	30658380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30658424_30658771_30658915_30660868_30661014_30666265_30666336_30667379
ENSMUSG00000029790.17_30658772_30680195_1	chr6	-	534	6	ISM	ENSMUSG00000029790.17	ENST00000675935.1	1229	11	13587	3073	13480	-3073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGAGAAGGGGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	30680195	30658771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30658915_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129
ENSMUSG00000029790.17_30658772_30693675_1	chr6	-	581	7	ISM	ENSMUSG00000029790.17	ENST00000343969.10	957	10	33	3073	0	-3073	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGAGAAGGGGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	30693675	30658771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
ENSMUSG00000029790.17_30658899_30693679_1	chr6	-	449	7	ISM	ENSMUSG00000029790.17	ENST00000675935.1	1229	11	103	3200	-4	-3200	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTAGACAAAGGGCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	30693679	30658898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30658915_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
ENSMUSG00000029797.14_48470542_48471797_1	chr6	+	453	3	ISM	ENSMUSG00000029797.14	ENST00000465639.5	2477	10	474	5659	474	-5659	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCCCCATCTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	48470541	48471797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48470838_48471005_48471123_48471757
ENSMUSG00000029797.14_48470600_48471843_1	chr6	+	441	3	ISM	ENSMUSG00000029797.14	ENST00000465639.5	2477	10	532	5613	532	-5613	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCGTGGGAGCTGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	48470599	48471843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48470838_48471005_48471123_48471757
ENSMUSG00000029797.14_48470714_48472141_1	chr6	+	480	4	ISM	ENSMUSG00000029797.14	ENST00000465639.5	2477	10	646	5315	646	-5315	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGGTGCGCCACAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	48470713	48472141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48470838_48471005_48471123_48471757_48471897_48472041
ENSMUSG00000029797.14_48471805_48473222_1	chr6	+	448	3	ISM	ENSMUSG00000029797.14	ENST00000465639.5	2477	10	1737	4234	1737	-4234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTAGGGGTGTGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	48471804	48473222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48471897_48472041_48472245_48473069
ENSMUSG00000029797.14_48471863_48473276_1	chr6	+	444	3	ISM	ENSMUSG00000029797.14	ENST00000465639.5	2477	10	1795	4180	1795	-4180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAGATCCAAGTGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	48471862	48473276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48471897_48472041_48472245_48473069
ENSMUSG00000029797.14_48472130_48473417_1	chr6	+	463	2	ISM	ENSMUSG00000029797.14	ENST00000465639.5	2477	10	2062	4039	2062	-4039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCAGGGACTGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	48472129	48473417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48472245_48473069
ENSMUSG00000029797.14_48472201_48473465_1	chr6	+	440	2	ISM	ENSMUSG00000029797.14	ENST00000465639.5	2477	10	2133	3991	2133	-3991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCTGGGTGGAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	48472200	48473465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48472245_48473069
ENSMUSG00000029797.14_48473234_48474316_1	chr6	+	443	2	ISM	ENSMUSG00000029797.14	ENST00000465639.5	2477	10	3166	3140	3166	-3140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGGAAATATGGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	48473233	48474316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48473607_48474246
ENSMUSG00000029797.14_48473343_48474429_1	chr6	+	447	2	ISM	ENSMUSG00000029797.14	ENST00000465639.5	2477	10	3275	3027	3275	-3027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCAGCTGGGGTACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	48473342	48474429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48473607_48474246
ENSMUSG00000029797.14_48473554_48475291_1	chr6	+	445	4	ISM	ENSMUSG00000029797.14	ENST00000465639.5	2477	10	3486	2165	3486	-2165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTGTTGCCCCATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	48473553	48475291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48473607_48474246_48474518_48475044_48475141_48475266
ENSMUSG00000029797.14_48474403_48477380_1	chr6	+	479	5	ISM	ENSMUSG00000029797.14	ENST00000465639.5	2477	10	4335	76	4335	-76	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCCCGATGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	48474402	48477380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48474518_48475044_48475141_48475266_48475328_48475577_48475709_48477304
ENSMUSG00000029797.14_48474472_48477422_1	chr6	+	452	5	ISM	ENSMUSG00000029797.14	ENST00000465639.5	2477	10	4404	34	4404	-34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCACAGCTGCCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	48474471	48477422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48474518_48475044_48475141_48475266_48475328_48475577_48475709_48477304
ENSMUSG00000029802.14_58573858_58669854_1	chr6	+	2708	16	FSM	ENSMUSG00000029802.14	ENSMUST00000031822.13	5717	16	202	2807	202	358	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATTGTAAAATGTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	58573857	58669854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ENSMUSG00000029802.14_58573976_58669893_1	chr6	+	2629	16	FSM	ENSMUSG00000029802.14	ENSMUST00000031822.13	5717	16	320	2768	320	397	multi-exon	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTGTTGGTATAATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	58573975	58669893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ENSMUSG00000029802.14_58617531_58651808_1	chr6	+	1300	9	ISM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	-18	17688	-18	-17688	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACAAGTGCCAGCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	58617530	58651808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_58617613_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552
ENSMUSG00000029802.14_58632621_58655343_1	chr6	+	1298	9	ISM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	15072	14153	15072	-14153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAATTTGGATATTT	NA	NA	NA	NA	NA	NA	NA	NA	58632620	58655343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260
ENSMUSG00000029802.14_58632658_58670054_1	chr6	+	2637	15	ISM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	15109	-558	15109	558	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGGTCCTGCATCTACA	NA	NA	NA	NA	NA	NA	NA	NA	58632657	58670054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ENSMUSG00000029802.14_58642111_58670437_1	chr6	+	2639	12	ISM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	24562	-941	24562	941	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTTCAGTGTGGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	58642110	58670437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ENSMUSG00000029802.14_58643865_58667604_1	chr6	+	1300	10	ISM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	26316	1892	26316	-1892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTGTGTTCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	58643864	58667604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515
ENSMUSG00000029802.14_58643936_58670655_1	chr6	+	2657	11	ISM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	26387	-1159	26387	1159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATGTTGCAAAACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	58643935	58670655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ENSMUSG00000029802.14_58649021_58669496_1	chr6	+	1231	9	ISM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	31472	0	31472	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACATTATCTGTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	58649020	58669496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ENSMUSG00000029802.14_58661320_58671369_1	chr6	+	2599	5	ISM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	43771	-1873	43771	-1292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATTCTCCTTTAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	58661319	58671369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ENSMUSG00000029802.14_58661407_58671519_1	chr6	+	2662	5	ISM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	43858	-2023	43858	-1142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCTTCCAGGTTAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	58661406	58671519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ENSMUSG00000029802.14_58666543_58671691_1	chr6	+	2640	3	ISM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	48994	-2195	48994	-970	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGCCAATGGAATTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	58666542	58671691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_58666630_58667515_58667605_58669227
ENSMUSG00000029814.11_49064749_49065439_1	chr6	-	143	2	ISM	ENSMUSG00000029814.11	ENST00000619562.4	1762	8	20525	1344	20525	-470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATCAAGTAGTTGTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	49065439	49064748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_49064816_49065363
ENSMUSG00000029814.11_49064766_49081164_1	chr6	-	431	5	ISM	ENSMUSG00000029814.11	ENST00000619562.4	1762	8	4800	1361	4800	-487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGACACCTGATGAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	49081164	49064765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107
ENSMUSG00000029814.11_49065430_49082555_1	chr6	-	436	5	ISM	ENSMUSG00000029814.11	ENST00000341855.4	964	8	108850	1151	3409	-1151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAGCTCACATCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	49082555	49065429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503
ENSMUSG00000029814.11_49065479_49082618_1	chr6	-	450	5	ISM	ENSMUSG00000029814.11	ENST00000341855.4	964	8	108787	1200	3346	-1200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGGAAAAATTAAAGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	49082618	49065478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503
ENSMUSG00000029814.11_49067953_49191268_1	chr6	-	442	5	ISM	ENSMUSG00000029814.11	ENST00000341855.4	964	8	137	3674	137	-3674	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGATGGTGATTATCACTG	NA	NA	NA	NA	NA	NA	NA	NA	49191268	49067952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_49067985_49071073_49071191_49081107_49081234_49082503_49082633_49191230
ENSMUSG00000029814.11_49071125_49191336_1	chr6	-	427	4	ISM	ENSMUSG00000029814.11	ENST00000341855.4	964	8	69	6846	69	-6846	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGGCCAACACATCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	49191336	49071124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_49071191_49081107_49081234_49082503_49082633_49191230
ENSMUSG00000029814.11_49071176_49191387_1	chr6	-	427	4	ISM	ENSMUSG00000029814.11	ENST00000341855.4	964	8	18	6897	18	-6897	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGCATCTGTTTATTCC	NA	NA	NA	NA	NA	NA	NA	NA	49191387	49071175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_49071191_49081107_49081234_49082503_49082633_49191230
ENSMUSG00000029817.12_49221247_49222464_1	chr6	-	542	3	ISM	ENSMUSG00000029817.12	ENSMUST00000031841.9	1799	8	18500	385	18480	-385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGGCATGGAGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	49222464	49221246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_49221666_49221801_49221870_49222409
ENSMUSG00000029817.12_49221319_49222497_1	chr6	-	503	3	ISM	ENSMUSG00000029817.12	ENSMUST00000031841.9	1799	8	18467	457	18447	-457	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAACTGCTTTTTAATCT	NA	NA	NA	NA	NA	NA	NA	NA	49222497	49221318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_49221666_49221801_49221870_49222409
ENSMUSG00000029817.12_49221536_49225968_1	chr6	-	498	5	ISM	ENSMUSG00000029817.12	ENSMUST00000031841.9	1799	8	14996	674	14976	-674	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACCAGTTGTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	49225968	49221535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919
ENSMUSG00000029817.12_49221586_49226034_1	chr6	-	514	5	ISM	ENSMUSG00000029817.12	ENSMUST00000031841.9	1799	8	14930	724	14910	-724	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTAGTCCTTTAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	49226034	49221585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919
ENSMUSG00000029817.12_49221830_49227877_1	chr6	-	561	5	ISM	ENSMUSG00000029817.12	ENSMUST00000031841.9	1799	8	13087	968	13067	-968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCGAGATCCCGTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	49227877	49221829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796
ENSMUSG00000029817.12_49225962_49240842_1	chr6	-	512	4	ISM	ENSMUSG00000029817.12	ENSMUST00000204189.3	1777	8	102	5104	102	-5100	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTTGTGTATTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	49240842	49225961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_49226109_49227796_49227957_49229315_49229450_49240771
ENSMUSG00000029817.12_49226030_49240945_1	chr6	-	547	4	ISM	ENSMUSG00000029817.12	ENSMUST00000204189.3	1777	8	-1	5172	-1	-5168	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCGATATGGACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	49240945	49226029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_49226109_49227796_49227957_49229315_49229450_49240771
ENSMUSG00000029821.16_50197969_50238955_1	chr6	-	1259	7	ISM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	-206	13586	-206	-13586	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGGGTAGGCGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	50238955	50197968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_50198097_50199715_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255_50228494_50238713
ENSMUSG00000029821.16_50199717_50240703_1	chr6	-	1152	7	ISM	ENSMUSG00000029821.16	ENSMUST00000031845.13	2502	11	139	15336	139	-15334	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTGCCTGTGGTTACGG	NA	NA	NA	NA	NA	NA	NA	NA	50240703	50199716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255_50228494_50238713_50238898_50240623
ENSMUSG00000029821.16_50199778_50240842_1	chr6	-	1230	7	ISM	ENSMUSG00000029821.16	ENSMUST00000031845.13	2502	11	0	15397	0	-15395	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTGGATGGGGGTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	50240842	50199777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255_50228494_50238713_50238898_50240623
ENSMUSG00000029822.16_50270693_50328937_1	chr6	-	4547	20	ISM	ENSMUSG00000029822.16	ENST00000313367.7	4831	22	1149	108	1149	-108	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTTTTCTATCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	50328937	50270692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_50270735_50271936_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50310165_50310274_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823
ENSMUSG00000029822.16_50271937_50329817_1	chr6	-	4559	20	ISM	ENSMUSG00000029822.16	ENST00000313367.7	4831	22	269	1352	269	730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCACTGCCCGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	50329817	50271936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50310165_50310274_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763
ENSMUSG00000029822.16_50272163_50330081_1	chr6	-	4450	21	ISM	ENSMUSG00000029822.16	ENST00000313367.7	4831	22	5	1578	5	504	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAAAAAAAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	50330081	50272162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50310165_50310274_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964
ENSMUSG00000029822.16_50273785_50321975_1	chr6	-	1911	13	ISM	ENSMUSG00000029822.16	ENSMUST00000114466.8	2916	21	25323	0	8111	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATGTGTGGGTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	50321975	50273784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50313194_50313326_50321853
ENSMUSG00000029822.16_50276343_50325079_1	chr6	-	1899	15	ISM	ENSMUSG00000029822.16	ENSMUST00000071728.11	3307	22	108071	2564	5007	-2558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTCTTGGAGGAGAACGG	NA	NA	NA	NA	NA	NA	NA	NA	50325079	50276342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50313194_50313326_50321853_50322011_50323307_50323412_50324345_50324470_50324950
ENSMUSG00000029822.16_50285358_50347195_1	chr6	-	1881	16	ISM	ENSMUSG00000029822.16	ENSMUST00000071728.11	3307	22	85955	11579	0	-11573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAGCGATGGATCGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	50347195	50285357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50313194_50313326_50321853_50322011_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102
ENSMUSG00000029822.16_50297060_50405400_1	chr6	-	1872	14	ISM	ENSMUSG00000029822.16	ENSMUST00000071728.11	3307	22	27750	23281	27750	-23275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCATCCGACAGGACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	50405400	50297059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50313194_50313326_50321853_50322011_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50405308
ENSMUSG00000029822.16_50300129_50433141_1	chr6	-	1938	14	ISM	ENSMUSG00000029822.16	ENSMUST00000071728.11	3307	22	9	26350	9	-26344	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCGTTAGCTTGTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	50433141	50300128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_50300204_50304354_50304449_50305649_50305785_50313194_50313326_50321853_50322011_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50432804
ENSMUSG00000029823.17_38542618_38580327_1	chr6	+	904	9	ISM	ENSMUSG00000029823.17	ENST00000541170.7	1350	10	36	5094	12	-1648	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAAGCCGCAGCCGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	38542617	38580327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_38542658_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ENSMUSG00000029823.17_38547444_38580403_1	chr6	+	932	7	NNC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	4838	-1572	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGAAGTGCCGATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	38547443	38580403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570426_38580211
ENSMUSG00000029823.17_38547524_38585132_1	chr6	+	906	9	ISM	ENSMUSG00000029823.17	ENST00000541170.7	1350	10	4942	289	4918	-289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGACAGGAGTTCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	38547523	38585132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211_38580404_38585087
ENSMUSG00000029823.17_38561976_38585218_1	chr6	+	967	7	NNC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	19370	-203	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGACAGGAGGAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	38561975	38585218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570426_38580211_38580404_38585087
ENSMUSG00000029823.17_38561976_38585218_2	chr6	+	976	8	ISM	ENSMUSG00000029823.17	ENST00000541170.7	1350	10	19394	203	19370	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGACAGGAGGAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	38561975	38585218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211_38580404_38585087
ENSMUSG00000029823.17_38568221_38585390_1	chr6	+	940	6	ISM	ENSMUSG00000029823.17	ENST00000541170.7	1350	10	25639	31	25615	-31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGAACCTGTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	38568220	38585390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211_38580404_38585087
ENSMUSG00000029823.17_38569637_38585559_1	chr6	+	880	5	ISM	ENSMUSG00000029823.17	ENST00000541170.7	1350	10	27055	-138	27031	138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTCTTTTCTATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	38569636	38585559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_38569731_38570312_38570405_38575719_38575750_38580211_38580404_38585087
ENSMUSG00000029823.17_38569641_38585584_1	chr6	+	882	4	NNC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	27035	163	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTAGGATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38569640	38585584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_38569731_38570312_38570416_38580211_38580404_38585087
ENSMUSG00000029823.17_38570346_38585677_1	chr6	+	871	4	ISM	ENSMUSG00000029823.17	ENST00000541170.7	1350	10	27764	-256	27740	256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAAGGGAAGTATTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	38570345	38585677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_38570405_38575719_38575750_38580211_38580404_38585087
ENSMUSG00000029823.17_38570370_38585751_1	chr6	+	912	3	NNC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	27764	330	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTACTGGATTGTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	38570369	38585751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_38570426_38580211_38580404_38585087
ENSMUSG00000029823.17_38580210_38585874_1	chr6	+	981	2	ISM	ENSMUSG00000029823.17	ENST00000263545.7	2084	10	37604	305	37604	-305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38580209	38585874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_38580404_38585087
ENSMUSG00000029826.15_38282221_38288655_1	chr6	-	2436	3	ISM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	42553	0	42553	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTCTGTTTATGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	38288655	38282220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38284392_38288112_38288247_38288524
ENSMUSG00000029826.15_38282357_38293277_1	chr6	-	2413	5	ISM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	37931	136	37931	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTCTCAAGCCCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	38293277	38282356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255
ENSMUSG00000029826.15_38282472_38296691_1	chr6	-	2432	6	ISM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	34517	251	34517	-251	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCACCATTCTCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	38296691	38282471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638
ENSMUSG00000029826.15_38282652_38302192_1	chr6	-	2386	7	ISM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	29016	431	29016	-431	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTCTTTTTCAGACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	38302192	38282651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126
ENSMUSG00000029826.15_38282904_38308723_1	chr6	-	2393	9	ISM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	22485	683	22485	-683	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTACGAAACATGTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	38308723	38282903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697
ENSMUSG00000029826.15_38282951_38308789_1	chr6	-	2412	9	ISM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	22419	730	22419	-730	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAATGGACATAAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	38308789	38282950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697
ENSMUSG00000029826.15_38283528_38309624_1	chr6	-	2390	10	ISM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	21584	1307	21584	-1307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGCTACAGCACAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	38309624	38283527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076
ENSMUSG00000029826.15_38283752_38309870_1	chr6	-	2412	10	ISM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	21338	1531	21338	-1531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATATAGGTCATAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	38309870	38283751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076
ENSMUSG00000029826.15_38284127_38313447_1	chr6	-	2391	11	ISM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	17761	1906	17761	-1906	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAAGGATGTATACCAT	NA	NA	NA	NA	NA	NA	NA	NA	38313447	38284126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346
ENSMUSG00000029826.15_38284164_38313525_1	chr6	-	2432	11	ISM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	17683	1943	17683	-1943	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGGAGTTAGAGAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	38313525	38284163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346
ENSMUSG00000029826.15_38284224_38313569_1	chr6	-	2416	11	ISM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	17639	2003	17639	-2003	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTCCGTCTTTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	38313569	38284223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346
ENSMUSG00000029826.15_38284345_38317219_1	chr6	-	2390	12	ISM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	13989	2124	13989	-2124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATTCCAGAGGCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	38317219	38284344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154
ENSMUSG00000029826.15_38288190_38330898_1	chr6	-	2386	12	FSM	ENSMUSG00000029826.15	ENSMUST00000143702.5	3364	12	310	668	310	-668	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCATATGGATTACATCT	NA	NA	NA	NA	NA	NA	NA	NA	38330898	38288189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
ENSMUSG00000029826.15_38288554_38331005_1	chr6	-	2407	11	ISM	ENSMUSG00000029826.15	ENSMUST00000143702.5	3364	12	203	1032	203	-1032	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGAAGCTCTGGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	38331005	38288553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
ENSMUSG00000029826.15_38288614_38331066_1	chr6	-	2408	11	ISM	ENSMUSG00000029826.15	ENSMUST00000143702.5	3364	12	142	1092	142	-1092	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAGTTTAAAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	38331066	38288613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
ENSMUSG00000029826.15_38289363_38331208_1	chr6	-	2474	10	ISM	ENSMUSG00000029826.15	ENSMUST00000143702.5	3364	12	0	1841	0	-1841	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTAGCACTGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	38331208	38289362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
ENSMUSG00000029830.16_37963443_38003948_1	chr6	-	993	9	ISM	ENSMUSG00000029830.16	ENST00000288513.9	1067	10	4079	0	4079	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTTGCAGGTAAGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	38003948	37963442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_37963547_37988173_37988264_37989225_37989308_37991691_37991804_37993954_37994167_37996612_37996687_37998483_37998613_37999928_38000055_38003884
ENSMUSG00000029830.16_37963443_38008024_1	chr6	-	1059	10	NNC	ENSMUSG00000029830.16	novel	1067	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTTGCAGGTAAGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	38008024	37963442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_37963547_37988173_37988264_37989225_37989303_37991691_37991804_37993954_37994167_37996612_37996687_37998483_37998613_37999928_38000055_38003884_38003949_38007953
ENSMUSG00000029830.16_37963443_38008024_2	chr6	-	1056	10	NNC	ENSMUSG00000029830.16	novel	1067	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTTGCAGGTAAGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	38008024	37963442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_37963547_37988173_37988264_37989225_37989308_37991691_37991804_37993954_37994167_37996612_37996679_37998483_37998613_37999928_38000055_38003884_38003949_38007953
ENSMUSG00000029836.16_51447510_51459493_1	chr6	+	698	6	FSM	ENSMUSG00000029836.16	ENSMUST00000031862.14	1889	6	0	1191	0	-520	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGGCGAACATGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	51447509	51459493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_51447720_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ENSMUSG00000029836.16_51447643_51459546_1	chr6	+	618	6	FSM	ENSMUSG00000029836.16	ENSMUST00000031862.14	1889	6	133	1138	-3	-467	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACTTGGCATTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	51447642	51459546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_51447720_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ENSMUSG00000029836.16_51447643_51459599_1	chr6	+	671	6	FSM	ENSMUSG00000029836.16	ENSMUST00000031862.14	1889	6	133	1085	-3	-414	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATTTATATATA	NA	NA	NA	NA	NA	NA	NA	NA	51447642	51459599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_51447720_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ENSMUSG00000029836.16_51447675_51460247_1	chr6	+	1119	5	FSM	ENSMUSG00000029836.16	ENSMUST00000114445.8	1585	5	29	437	0	234	multi-exon	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAACAAGACTTGGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	51447674	51460247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_51447715_51448795_51448849_51452210_51452354_51458703_51458799_51459459
ENSMUSG00000029836.16_51452263_51460684_1	chr6	+	1574	4	ISM	ENSMUSG00000029836.16	ENSMUST00000114446.8	1719	6	4588	0	4588	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	51452262	51460684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_51452354_51455417_51455581_51458703_51458799_51459459
ENSMUSG00000029836.16_51452296_51460424_1	chr6	+	1118	3	ISM	ENSMUSG00000029836.16	ENSMUST00000114445.8	1585	5	4650	260	4621	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTGGCTGGAGCTGACGT	NA	NA	NA	NA	NA	NA	NA	NA	51452295	51460424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_51452354_51458703_51458799_51459459
ENSMUSG00000029838.12_36691864_36786890_1	chr6	-	1349	5	FSM	ENSMUSG00000029838.12	ENSMUST00000101534.5	1614	5	265	0	224	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTTTGTGTACAATGA	NA	NA	NA	NA	NA	NA	NA	NA	36786890	36691863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_36692698_36718212_36718375_36720261_36720436_36721323_36721441_36786828
ENSMUSG00000029838.12_36691864_36787005_1	chr6	-	1464	5	FSM	ENSMUSG00000029838.12	ENSMUST00000101534.5	1614	5	150	0	109	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTTTGTGTACAATGA	NA	NA	NA	NA	NA	NA	NA	NA	36787005	36691863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_36692698_36718212_36718375_36720261_36720436_36721323_36721441_36786828
ENSMUSG00000029838.12_36692104_36787114_1	chr6	-	1328	5	NNC	ENSMUSG00000029838.12	novel	1614	5	NA	NA	0	-240	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGAAATGCATTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	36787114	36692103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_36692698_36718212_36718370_36720261_36720436_36721323_36721441_36786828
ENSMUSG00000029838.12_36692104_36787114_2	chr6	-	1333	5	FSM	ENSMUSG00000029838.12	ENSMUST00000101534.5	1614	5	41	240	0	-240	multi-exon	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGAAATGCATTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	36787114	36692103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_36692698_36718212_36718375_36720261_36720436_36721323_36721441_36786828
ENSMUSG00000029840.9_35488934_35499730_1	chr6	-	517	3	ISM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	17093	3093	17093	-3093	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTTTTTCATTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	35499730	35488933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_35489253_35498834_35498919_35499616
ENSMUSG00000029840.9_35489061_35516609_1	chr6	-	526	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	214	3220	214	-3220	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTAAGAGGGTGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	35516609	35489060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ENSMUSG00000029840.9_35498864_35516734_1	chr6	-	430	3	ISM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	89	13023	89	-13023	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGCGTGAAATTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	35516734	35498863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_35498919_35499616_35499731_35516473
ENSMUSG00000029840.9_35498864_35516823_1	chr6	-	519	3	ISM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	0	13023	0	-13023	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGCGTGAAATTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	35516823	35498863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_35498919_35499616_35499731_35516473
ENSMUSG00000029843.5_35245879_35255220_1	chr6	-	697	7	ISM	ENSMUSG00000029843.5	ENST00000354042.8	1889	15	29171	116	29171	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGGTCTGGTGATCGTG	NA	NA	NA	NA	NA	NA	NA	NA	35255220	35245878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_35245904_35247278_35247417_35248543_35248706_35251850_35251965_35252566_35252674_35253383_35253486_35255171
ENSMUSG00000029843.5_35247372_35256391_1	chr6	-	678	7	ISM	ENSMUSG00000029843.5	ENST00000354042.8	1889	15	28000	1609	28000	-1609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTCAATCTCCTTCGC	NA	NA	NA	NA	NA	NA	NA	NA	35256391	35247371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_35247417_35248543_35248706_35251850_35251965_35252566_35252674_35253383_35253486_35255171_35255274_35256345
ENSMUSG00000029843.5_35248596_35257268_1	chr6	-	680	7	ISM	ENSMUSG00000029843.5	ENST00000354042.8	1889	15	27123	2833	27123	-2833	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGCAATCCAGCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	35257268	35248595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_35248706_35251850_35251965_35252566_35252674_35253383_35253486_35255171_35255274_35256345_35256466_35257243
ENSMUSG00000029843.5_35248640_35257333_1	chr6	-	701	7	ISM	ENSMUSG00000029843.5	ENST00000354042.8	1889	15	27058	2877	27058	-2877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACCCTGCTGGCGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35257333	35248639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_35248706_35251850_35251965_35252566_35252674_35253383_35253486_35255171_35255274_35256345_35256466_35257243
ENSMUSG00000029843.5_35251851_35257434_1	chr6	-	736	6	ISM	ENSMUSG00000029843.5	ENST00000354042.8	1889	15	26957	6088	26957	-6088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTAGTTGGTTCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	35257434	35251850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_35251965_35252566_35252674_35253383_35253486_35255171_35255274_35256345_35256466_35257243
ENSMUSG00000029843.5_35252566_35260304_1	chr6	-	751	6	ISM	ENSMUSG00000029843.5	ENST00000354042.8	1889	15	24087	6803	24087	-6803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACATTTTGTGCTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	35260304	35252565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_35252674_35253383_35253486_35255171_35255274_35256345_35256466_35257243_35257432_35260173
ENSMUSG00000029843.5_35253406_35264750_1	chr6	-	738	7	ISM	ENSMUSG00000029843.5	ENST00000354042.8	1889	15	19641	7643	19641	-7643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGATTCTTTCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	35264750	35253405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_35253486_35255171_35255274_35256345_35256466_35257243_35257432_35260173_35260305_35264281_35264337_35264688
ENSMUSG00000029843.5_35255172_35264852_1	chr6	-	760	6	ISM	ENSMUSG00000029843.5	ENST00000354042.8	1889	15	19539	9409	19539	-9409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGCTACACCGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	35264852	35255171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_35255274_35256345_35256466_35257243_35257432_35260173_35260305_35264281_35264337_35264688
ENSMUSG00000029843.5_35256416_35266827_1	chr6	-	687	6	ISM	ENSMUSG00000029843.5	ENST00000354042.8	1889	15	17564	10653	17564	-10653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCCATCTCGCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	35266827	35256415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_35256466_35257243_35257432_35260173_35260305_35264281_35264337_35264688_35264853_35266728
ENSMUSG00000029843.5_35257255_35278703_1	chr6	-	708	6	ISM	ENSMUSG00000029843.5	ENST00000354042.8	1889	15	5688	11492	5688	-11492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTCAACAAGTAAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	35278703	35257254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_35257432_35260173_35260305_35264281_35264337_35264688_35264853_35266728_35266866_35278659
ENSMUSG00000029843.5_35257411_35284360_1	chr6	-	705	7	ISM	ENSMUSG00000029843.5	ENST00000354042.8	1889	15	31	11648	31	-11648	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGCTCCAAGACCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	35284360	35257410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_35257432_35260173_35260305_35264281_35264337_35264688_35264853_35266728_35266866_35278659_35278789_35284292
ENSMUSG00000029859.7_42335421_42338382_1	chr6	-	1023	5	ISM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	11820	0	11820	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCTTCCCTTGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	42338382	42335420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42335781_42335869_42336026_42337478_42337673_42337938_42338089_42338219
ENSMUSG00000029859.7_42335650_42338880_1	chr6	-	1070	7	ISM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	11322	229	11322	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCTACAGTCAACTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	42338880	42335649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42335781_42335869_42336026_42337478_42337673_42337938_42338089_42338219_42338427_42338527_42338590_42338710
ENSMUSG00000029859.7_42335902_42339716_1	chr6	-	1049	7	ISM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	10486	481	10486	-252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGAGTGTGTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	42339716	42335901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42336026_42337478_42337673_42337938_42338089_42338219_42338427_42338527_42338590_42338710_42338897_42339590
ENSMUSG00000029859.7_42337609_42341160_1	chr6	-	1017	9	ISM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	9042	2188	9042	-1959	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAACTCATGAAGAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	42341160	42337608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42337673_42337938_42338089_42338219_42338427_42338527_42338590_42338710_42338897_42339590_42339717_42340495_42340555_42340743_42340841_42341094
ENSMUSG00000029859.7_42338297_42341748_1	chr6	-	978	9	ISM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	8454	2876	8454	-2647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCTGTGCTGCAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	42341748	42338296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42338427_42338527_42338590_42338710_42338897_42339590_42339717_42340495_42340555_42340743_42340841_42341094_42341246_42341470_42341599_42341709
ENSMUSG00000029859.7_42338334_42341834_1	chr6	-	1027	9	ISM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	8368	2913	8368	-2684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGAGACCTGGCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	42341834	42338333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42338427_42338527_42338590_42338710_42338897_42339590_42339717_42340495_42340555_42340743_42340841_42341094_42341246_42341470_42341599_42341709
ENSMUSG00000029859.7_42338767_42342044_1	chr6	-	1026	7	ISM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	8158	3346	8158	-3117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGGCCAGTTCAACCACC	NA	NA	NA	NA	NA	NA	NA	NA	42342044	42338766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42338897_42339590_42339717_42340495_42340555_42340743_42340841_42341094_42341246_42341470_42341599_42341709
ENSMUSG00000029859.7_42339625_42342497_1	chr6	-	1017	7	ISM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	7705	4204	7705	-3975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTGATTGTGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	42342497	42339624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42339717_42340495_42340555_42340743_42340841_42341094_42341246_42341470_42341599_42341709_42342055_42342352
ENSMUSG00000029859.7_42340518_42342825_1	chr6	-	1030	7	ISM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	7377	5097	7377	-4868	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCACCACCAATGTCGATCG	NA	NA	NA	NA	NA	NA	NA	NA	42342825	42340517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42340555_42340743_42340841_42341094_42341246_42341470_42341599_42341709_42342055_42342352_42342509_42342709
ENSMUSG00000029859.7_42341129_42343026_1	chr6	-	1063	5	ISM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	7176	5708	7176	-5479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTGACCATGAGTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	42343026	42341128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42341246_42341470_42341599_42341709_42342055_42342352_42342509_42342709
ENSMUSG00000029859.7_42341213_42343055_1	chr6	-	1008	5	ISM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	7147	5792	7147	-5563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTCTTGCTGACAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	42343055	42341212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42341246_42341470_42341599_42341709_42342055_42342352_42342509_42342709
ENSMUSG00000029859.7_42341533_42344561_1	chr6	-	1012	5	ISM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	5641	6112	5641	-5883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGTCCCGACCCCGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	42344561	42341532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42341599_42341709_42342055_42342352_42342509_42342709_42343113_42344519
ENSMUSG00000029859.7_42341857_42344777_1	chr6	-	1015	4	ISM	ENSMUSG00000029859.7	ENSMUST00000204357.2	2948	16	5425	6207	5425	-6207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGCTCACCACATCTACC	NA	NA	NA	NA	NA	NA	NA	NA	42344777	42341856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42342055_42342352_42342509_42342709_42343113_42344519
ENSMUSG00000029860.17_42326714_42328698_1	chr6	+	1146	5	ISM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	-48	6798	-48	-6628	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGTGGTTTCCAAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	42326713	42328698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_42327054_42327190_42327411_42327879_42328083_42328203_42328297_42328408
ENSMUSG00000029860.17_42326967_42332971_1	chr6	+	1219	6	ISM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	205	2525	0	-2355	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1864	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCAGCACCCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	42326966	42332971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_42327054_42327190_42327411_42327879_42328083_42328203_42328297_42328408_42328904_42332850
ENSMUSG00000029860.17_42327190_42332971_1	chr6	+	1133	5	ISM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	428	2525	217	-2355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCAGCACCCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	42327189	42332971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_42327411_42327879_42328083_42328203_42328297_42328408_42328904_42332850
ENSMUSG00000029860.17_42327322_42333265_1	chr6	+	1171	6	ISM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	560	2231	349	-2061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCTGTTTTGGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	42327321	42333265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_42327411_42327879_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095
ENSMUSG00000029860.17_42327882_42333399_1	chr6	+	1114	6	ISM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	1120	2097	909	-1927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	899	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCACTGACCGCATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	42327881	42333399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365
ENSMUSG00000029860.17_42327939_42333444_1	chr6	+	1102	6	ISM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	1177	2052	966	-1882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTGCTTCACCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	42327938	42333444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365
ENSMUSG00000029860.17_42327990_42333500_1	chr6	+	1107	6	ISM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	1228	1996	1017	-1826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGACCAGGCCAATCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	42327989	42333500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365
ENSMUSG00000029860.17_42328032_42334268_1	chr6	+	1131	7	ISM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	1270	1228	1059	-1058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGCTCGGAGCCAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	42328031	42334268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246
ENSMUSG00000029860.17_42328201_42334367_1	chr6	+	1182	6	ISM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	1439	1129	1228	-959	internal_fragment	FALSE	canonical	NA	NA	NA	NA	990	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTGGTTCCCTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	42328200	42334367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246
ENSMUSG00000029860.17_42328607_42335032_1	chr6	+	1135	6	ISM	ENSMUSG00000029860.17	ENSMUST00000203401.3	1954	10	1640	294	1634	-294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAAGTATTGAGGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	42328606	42335032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
ENSMUSG00000029860.17_42328673_42335104_1	chr6	+	1141	6	ISM	ENSMUSG00000029860.17	ENSMUST00000203401.3	1954	10	1706	222	1700	-222	intron_retention	FALSE	canonical	NA	NA	NA	NA	1315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCCATCATTCTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	42328672	42335104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
ENSMUSG00000029860.17_42328761_42335167_1	chr6	+	1116	6	ISM	ENSMUSG00000029860.17	ENSMUST00000203401.3	1954	10	1794	159	1788	-159	intron_retention	FALSE	canonical	NA	NA	NA	NA	1152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCAATGCCCTTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	42328760	42335167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
ENSMUSG00000029860.17_42332849_42335326_1	chr6	+	1134	5	ISM	ENSMUSG00000029860.17	ENSMUST00000203401.3	1954	10	5882	0	5876	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1561	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGCTAGTACTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	42332848	42335326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
ENSMUSG00000029860.17_42333095_42335497_1	chr6	+	1183	4	ISM	ENSMUSG00000029860.17	ENSMUST00000203401.3	1954	10	6128	-171	6122	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	1809	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTCCCCTTCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	42333094	42335497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_42333266_42333365_42333545_42334246_42334368_42334785
ENSMUSG00000029869.8_41582416_41593807_1	chr6	+	2201	9	ISM	ENSMUSG00000029869.8	ENSMUST00000114732.3	3762	18	0	3636	0	-3629	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGGGCAAAGTCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	41582415	41593807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_41582755_41589577_41589650_41590148_41590353_41590685_41590751_41591012_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681
ENSMUSG00000029869.8_41582536_41594219_1	chr6	+	2140	10	ISM	ENSMUSG00000029869.8	ENSMUST00000114732.3	3762	18	120	3224	120	-3217	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGCTGTCCTTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	41582535	41594219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_41582755_41589577_41589650_41590148_41590353_41590685_41590751_41591012_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197
ENSMUSG00000029869.8_41582651_41594581_1	chr6	+	2139	11	ISM	ENSMUSG00000029869.8	ENSMUST00000114732.3	3762	18	235	2862	235	-2855	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAGAACAACTGCAACAAT	NA	NA	NA	NA	NA	NA	NA	NA	41582650	41594581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_41582755_41589577_41589650_41590148_41590353_41590685_41590751_41591012_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560
ENSMUSG00000029869.8_41589593_41594871_1	chr6	+	2143	11	ISM	ENSMUSG00000029869.8	ENSMUST00000114732.3	3762	18	7177	2572	13	-2565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAAGATTGAAGAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	41589592	41594871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_41589650_41590148_41590353_41590685_41590751_41591012_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780
ENSMUSG00000029869.8_41590232_41595208_1	chr6	+	2239	11	ISM	ENSMUSG00000029869.8	ENSMUST00000114732.3	3762	18	7816	2235	652	-2228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACTCATGGAACTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	41590231	41595208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_41590353_41590685_41590751_41591012_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001
ENSMUSG00000029869.8_41591182_41596239_1	chr6	+	2174	11	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	1602	1197	1602	-1197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCTTTGGCATACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	41591181	41596239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164
ENSMUSG00000029869.8_41591343_41596604_1	chr6	+	2152	12	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	1763	832	1763	-832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTACTGATGCTAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	41591342	41596604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164_41596315_41596540
ENSMUSG00000029869.8_41591430_41596677_1	chr6	+	2138	12	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	1850	759	1850	-759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAGATGATTCGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	41591429	41596677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164_41596315_41596540
ENSMUSG00000029869.8_41591483_41596725_1	chr6	+	2133	12	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	1903	711	1903	-711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGGACAGGTCTGAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	41591482	41596725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164_41596315_41596540
ENSMUSG00000029869.8_41591626_41597183_1	chr6	+	2209	14	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	2046	253	2046	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACATTCAGCTCCTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	41591625	41597183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164_41596315_41596540_41596735_41596856_41597013_41597129
ENSMUSG00000029869.8_41592499_41597441_1	chr6	+	2241	13	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	2919	-5	2919	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGGTGTGTCCATGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	41592498	41597441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164_41596315_41596540_41596735_41596856_41597013_41597129
ENSMUSG00000029910.15_66512452_66517562_1	chr6	+	1312	5	FSM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	0	413	0	-413	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCCCATCAATGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	66512451	66517562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754
ENSMUSG00000029910.15_66512452_66517625_1	chr6	+	1375	5	FSM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	0	350	0	-350	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTTAGATGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	66512451	66517625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754
ENSMUSG00000029910.15_66512452_66517704_1	chr6	+	1454	5	FSM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	0	271	0	-271	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGTTTTTCTACCTACA	NA	NA	NA	NA	NA	NA	NA	NA	66512451	66517704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754
ENSMUSG00000029910.15_66514562_66517975_1	chr6	+	1437	3	ISM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	2110	0	2110	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAATCAAGCTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	66514561	66517975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_66514674_66515948_66516053_66516754
ENSMUSG00000029910.15_66514616_66517975_1	chr6	+	1383	3	ISM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	2164	0	2164	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAATCAAGCTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	66514615	66517975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_66514674_66515948_66516053_66516754
ENSMUSG00000029911.15_40448387_40457824_1	chr6	+	1098	6	FSM	ENSMUSG00000029911.15	ENSMUST00000121360.8	1188	6	-15	105	-15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGAACGGATGATTCGT	NA	NA	NA	NA	NA	NA	NA	NA	40448386	40457824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ENSMUSG00000029911.15_40448590_40457927_1	chr6	+	753	7	FSM	ENSMUSG00000029911.15	ENSMUST00000117411.8	933	7	181	-1	181	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTGGTTATATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	40448589	40457927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_40448760_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ENSMUSG00000029911.15_40451597_40457824_1	chr6	+	404	5	FSM	ENSMUSG00000029911.15	ENST00000445848.2	404	5	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGAACGGATGATTCGT	NA	NA	NA	NA	NA	NA	NA	NA	40451596	40457824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_40451660_40453300_40453442_40453681_40453755_40454856_40454946_40457786
ENSMUSG00000029911.15_40453301_40457824_1	chr6	+	341	4	ISM	ENSMUSG00000029911.15	ENST00000445848.2	404	5	1704	0	1704	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGAACGGATGATTCGT	NA	NA	NA	NA	NA	NA	NA	NA	40453300	40457824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40453442_40453681_40453755_40454856_40454946_40457786
ENSMUSG00000029911.15_40453413_40458210_1	chr6	+	630	4	ISM	ENSMUSG00000029911.15	ENSMUST00000117411.8	933	7	5004	-284	1816	281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTTTGCATATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	40453412	40458210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40453442_40453681_40453770_40454856_40454946_40457786
ENSMUSG00000029913.15_65771302_65904990_1	chr6	+	957	9	ISM	ENSMUSG00000029913.15	ENSMUST00000031973.13	1488	11	15293	8292	15217	-8128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCAGTGTGACGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	65771301	65904990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_65771368_65808232_65808356_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900
ENSMUSG00000029913.15_65832991_65847377_1	chr6	+	661	6	ISM	ENSMUSG00000029913.15	ENSMUST00000172638.2	1714	14	76906	65741	76906	-65741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGACAAACCCTACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	65832990	65847377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_65833108_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295
ENSMUSG00000029913.15_65834694_65858126_1	chr6	+	647	6	ISM	ENSMUSG00000029913.15	ENSMUST00000172638.2	1714	14	78609	54992	78609	-54992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTCACAGCCAAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	65834693	65858126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032
ENSMUSG00000029913.15_65847361_65913282_1	chr6	+	962	7	ISM	ENSMUSG00000029913.15	ENSMUST00000031973.13	1488	11	91352	0	91276	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATTCAAAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	65847360	65913282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ENSMUSG00000029915.15_40556307_40558797_1	chr6	-	171	2	ISM	ENSMUSG00000029915.15	ENST00000551012.6	539	5	3383	1425	3383	-1413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTGAACAGCCTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	40558797	40556306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_40556414_40558733
ENSMUSG00000029915.15_40556363_40558870_1	chr6	-	188	2	ISM	ENSMUSG00000029915.15	ENST00000551012.6	539	5	3310	1481	3310	-1469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTCAGCCTGGAGAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	40558870	40556362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_40556414_40558733
ENSMUSG00000029915.15_40558812_40562131_1	chr6	-	172	3	ISM	ENSMUSG00000029915.15	ENST00000551012.6	539	5	49	3930	49	-3918	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTTGGAAAGACAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	40562131	40558811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_40558871_40561299_40561365_40562083
ENSMUSG00000029918.10_39778738_39782432_1	chr6	-	869	2	ISM	ENSMUSG00000029918.10	ENSMUST00000031978.9	1107	3	5490	0	544	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTTTGAGACAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	39782432	39778737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39779479_39782304
ENSMUSG00000029918.10_39779000_39787863_1	chr6	-	786	3	FSM	ENSMUSG00000029918.10	ENSMUST00000031978.9	1107	3	59	262	-44	126	multi-exon	FALSE	canonical	NA	NA	NA	NA	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCCTTTGTATTCACC	NA	NA	NA	NA	NA	NA	NA	NA	39787863	39778999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_39779479_39782304_39782546_39787797
ENSMUSG00000029922.16_39374738_39376812_1	chr6	-	1712	2	ISM	ENSMUSG00000029922.16	ENST00000640520.1	1288	7	10274	-1306	10274	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	NA	NA	NA	NA	NA	NA	NA	39376812	39374737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39376369_39376731
ENSMUSG00000029922.16_39374900_39377420_1	chr6	-	1700	3	ISM	ENSMUSG00000029922.16	ENST00000640520.1	1288	7	9666	-1144	9666	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAACGTGGGAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	39377420	39374899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39376369_39376731_39376871_39377328
ENSMUSG00000029922.16_39375537_39382820_1	chr6	-	1680	6	ISM	ENSMUSG00000029922.16	ENSMUST00000114823.8	2992	8	13890	799	4266	507	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCATCAGCGCAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	39382820	39375536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664
ENSMUSG00000029922.16_39375710_39387108_1	chr6	-	1668	7	ISM	ENSMUSG00000029922.16	ENST00000417517.1	1326	8	10109	-450	-22	334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCATGGTTTAGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	39387108	39375709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021
ENSMUSG00000029922.16_39376077_39397232_1	chr6	-	1424	8	FSM	ENSMUSG00000029922.16	ENST00000417517.1	1326	8	-15	-83	0	-33	multi-exon	FALSE	canonical	NA	NA	NA	NA	2572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAGGCAGGCCTCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	39397232	39376076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397151
ENSMUSG00000029922.16_39376274_39387136_1	chr6	-	1108	7	FSM	ENSMUSG00000029922.16	ENST00000433469.2	1225	7	10	107	10	-107	multi-exon	FALSE	canonical	NA	NA	NA	NA	1753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGATGTTGCTTATGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	39387136	39376273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381788_39382667_39382895_39387021
ENSMUSG00000029922.16_39377688_39387136_1	chr6	-	786	2	FSM	ENSMUSG00000029922.16	ENST00000480552.5	799	2	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTGAAATGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	39387136	39377687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_39378359_39387021
ENSMUSG00000029925.14_38895914_39061315_1	chr6	+	1623	12	FSM	ENSMUSG00000029925.14	ENST00000652056.1	1688	12	66	-1	0	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGGGAAAGAGGAAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	38895913	39061315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_38896176_38925475_38925570_38928811_38928865_38959054_38959152_38978185_38978303_38994825_38994915_38997972_38998122_38999902_39000034_39004573_39004889_39048289_39048382_39057872_39058011_39061229
ENSMUSG00000029925.14_38895958_39061315_1	chr6	+	1579	12	FSM	ENSMUSG00000029925.14	ENST00000652056.1	1688	12	110	-1	44	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGGGAAAGAGGAAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	38895957	39061315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_38896176_38925475_38925570_38928811_38928865_38959054_38959152_38978185_38978303_38994825_38994915_38997972_38998122_38999902_39000034_39004573_39004889_39048289_39048382_39057872_39058011_39061229
ENSMUSG00000029993.17_86986818_87002513_1	chr6	+	656	7	ISM	ENSMUSG00000029993.17	ENSMUST00000117583.8	950	8	0	2928	0	-2923	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATGGCATCGTGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	86986817	87002513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467
ENSMUSG00000029993.17_86989939_87005324_1	chr6	+	659	7	ISM	ENSMUSG00000029993.17	ENSMUST00000117583.8	950	8	3121	117	3121	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATCTGCATTTTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	86989938	87005324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ENSMUSG00000029993.17_86992545_87005443_1	chr6	+	730	6	ISM	ENSMUSG00000029993.17	ENSMUST00000117583.8	950	8	5727	-2	5727	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCTTCCTCTCACGAA	NA	NA	NA	NA	NA	NA	NA	NA	86992544	87005443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ENSMUSG00000029994.18_86713829_86730858_1	chr6	-	1560	8	ISM	ENSMUSG00000029994.18	ENSMUST00000113675.8	2030	12	12034	7	12034	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGGTGTGTATTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	86730858	86713828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784
ENSMUSG00000029994.18_86714180_86742789_1	chr6	-	1569	12	FSM	ENSMUSG00000029994.18	ENSMUST00000113675.8	2030	12	103	358	103	310	multi-exon	FALSE	canonical	NA	NA	NA	NA	2513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAGAGTTACCAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	86742789	86714179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743
ENSMUSG00000029994.18_86714330_86770546_1	chr6	-	1475	13	FSM	ENSMUSG00000029994.18	ENSMUST00000001187.15	2002	13	20	507	20	160	multi-exon	FALSE	canonical	NA	NA	NA	NA	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTAGATTCTTATTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	86770546	86714329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
ENSMUSG00000029994.18_86714490_86770637_1	chr6	-	1359	13	NNC	ENSMUSG00000029994.18	novel	1361	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATTATTTCCTCGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	86770637	86714489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731900_86731949_86734802_86734896_86737655_86737744_86742739_86742790_86770473
ENSMUSG00000029994.18_86714490_86770637_2	chr6	-	1356	13	NNC	ENSMUSG00000029994.18	novel	1361	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATTATTTCCTCGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	86770637	86714489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_86714806_86718817_86718941_86720099_86720154_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731900_86731949_86734800_86734896_86737655_86737744_86742739_86742790_86770473
ENSMUSG00000029994.18_86714490_86770637_3	chr6	-	1353	13	NNC	ENSMUSG00000029994.18	novel	1361	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATTATTTCCTCGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	86770637	86714489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728094_86729134_86729215_86730784_86730876_86731900_86731949_86734800_86734896_86737655_86737744_86742739_86742790_86770473
ENSMUSG00000029994.18_86714490_86770637_4	chr6	-	1361	13	FSM	ENSMUSG00000029994.18	ENST00000409920.5	1361	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATTATTTCCTCGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	86770637	86714489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731900_86731949_86734800_86734896_86737655_86737744_86742739_86742790_86770473
ENSMUSG00000029994.18_86714490_86770637_5	chr6	-	1357	13	NIC	ENSMUSG00000029994.18	novel	1361	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATTATTTCCTCGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	86770637	86714489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731900_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770473
ENSMUSG00000029998.15_86362988_86374125_1	chr6	-	4278	6	NNC	ENSMUSG00000029998.15	novel	4295	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	86374125	86362987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373097_86373954
ENSMUSG00000029998.15_86365971_86371453_1	chr6	-	525	4	ISM	ENSMUSG00000029998.15	ENST00000264441.9	1205	6	2620	242	2620	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAACAAATTTCAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	86371453	86365970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_86366068_86368657_86368811_86369118_86369331_86371390
ENSMUSG00000029999.15_86240137_86249478_1	chr6	+	362	3	NNC	ENSMUSG00000029999.15	novel	362	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCGTCCATGCTAGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	86240136	86249478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_86240259_86246911_86247089_86249415
ENSMUSG00000029999.15_86240137_86249478_2	chr6	+	367	3	NNC	ENSMUSG00000029999.15	novel	362	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCGTCCATGCTAGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	86240136	86249478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_86240259_86246911_86247083_86249404
ENSMUSG00000029999.15_86240137_86249478_3	chr6	+	362	4	FSM	ENSMUSG00000029999.15	ENST00000295400.11	362	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCGTCCATGCTAGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	86240136	86249478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_86240259_86246911_86247062_86248361_86248389_86249415
ENSMUSG00000029999.15_86240137_86249478_4	chr6	+	346	3	NNC	ENSMUSG00000029999.15	novel	362	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCGTCCATGCTAGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	86240136	86249478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_86240259_86246911_86247062_86249404
ENSMUSG00000029999.15_86240137_86249478_5	chr6	+	356	3	NNC	ENSMUSG00000029999.15	novel	362	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCGTCCATGCTAGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	86240136	86249478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_86240259_86246911_86247083_86249415
ENSMUSG00000030002.16_85923101_85927061_1	chr6	-	1900	3	ISM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	11588	3851	11588	-3851	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTTAGAAACATACATGAA	NA	NA	NA	NA	NA	NA	NA	NA	85927061	85923100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_85924759_85926599_85926780_85926999
ENSMUSG00000030002.16_85923304_85930435_1	chr6	-	1902	6	ISM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	8214	4054	8214	-4054	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGCCCTGTTCCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	85930435	85923303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352
ENSMUSG00000030002.16_85923588_85936267_1	chr6	-	1861	8	ISM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	2382	4338	2382	-4338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTCTCTACCCATCAC	NA	NA	NA	NA	NA	NA	NA	NA	85936267	85923587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197
ENSMUSG00000030002.16_85923718_85938589_1	chr6	-	1907	9	FSM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	60	4468	60	-4468	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTTCTCTCTCATGTA	NA	NA	NA	NA	NA	NA	NA	NA	85938589	85923717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
ENSMUSG00000030007.9_85428496_85438542_1	chr6	+	1054	5	ISM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	0	6915	0	-6671	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTCCAGGGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	85428495	85438542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489
ENSMUSG00000030007.9_85428663_85439080_1	chr6	+	960	6	ISM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	167	6377	167	-6133	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1454	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCGCCAAGATGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	85428662	85439080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007
ENSMUSG00000030007.9_85428705_85439144_1	chr6	+	982	6	ISM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	209	6313	209	-6069	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1701	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCAAGAAGGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	85428704	85439144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007
ENSMUSG00000030007.9_85428770_85439179_1	chr6	+	952	6	ISM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	274	6278	274	-6034	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGAGCCTGTCGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	85428769	85439179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007
ENSMUSG00000030007.9_85428871_85441893_1	chr6	+	983	7	ISM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	375	3564	-203	-3320	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATGCTGAAATCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	85428870	85441893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761
ENSMUSG00000030007.9_85429001_85442964_1	chr6	+	969	8	ISM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	505	2493	-73	-2249	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1737	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAAACTCCCTATTG	NA	NA	NA	NA	NA	NA	NA	NA	85429000	85442964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881
ENSMUSG00000030007.9_85429001_85443070_1	chr6	+	1075	8	ISM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	505	2387	-73	-2143	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAACCCTTGGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	85429000	85443070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881
ENSMUSG00000030007.9_85436196_85444030_1	chr6	+	987	9	ISM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	7700	1427	100	-1183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1533	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGGCCAAGACATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	85436195	85444030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008
ENSMUSG00000030007.9_85436922_85444141_1	chr6	+	1045	8	ISM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	8426	1316	826	-1072	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1755	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGGATGACAGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	85436921	85444141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008
ENSMUSG00000030007.9_85438028_85444580_1	chr6	+	955	8	ISM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	9532	877	1932	-633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	991	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGAGCCATCGAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	85438027	85444580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560
ENSMUSG00000030007.9_85438075_85444634_1	chr6	+	962	8	ISM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	9579	823	1979	-579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCTGGGAAGCAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	85438074	85444634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560
ENSMUSG00000030007.9_85438124_85444686_1	chr6	+	965	8	ISM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	9628	771	2028	-527	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1031	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTCCACGACAGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	85438123	85444686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560
ENSMUSG00000030007.9_85439134_85445264_1	chr6	+	1068	7	ISM	ENSMUSG00000030007.9	ENSMUST00000204592.3	1544	11	10060	0	3038	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCGGTCTGCACCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	85439133	85445264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ENSMUSG00000030007.9_85442880_85445457_1	chr6	+	1052	5	ISM	ENSMUSG00000030007.9	ENST00000406551.2	1571	11	6784	-244	6784	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1814	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTCTGCTGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	85442879	85445457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ENSMUSG00000030030.6_83133483_83139562_1	chr6	+	1558	4	FSM	ENSMUSG00000030030.6	ENSMUST00000032106.6	2020	4	97	365	0	-311	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTCTGGATGGCCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	83133482	83139562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_83133573_83137893_83138116_83138197_83138420_83138538
ENSMUSG00000030030.6_83137994_83139873_1	chr6	+	1679	3	ISM	ENSMUSG00000030030.6	ENSMUST00000032106.6	2020	4	4608	54	4511	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCCACACTGGGAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	83137993	83139873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83138116_83138197_83138420_83138538
ENSMUSG00000030031.15_95094931_95103854_1	chr6	+	422	2	FSM	ENSMUSG00000030031.15	ENST00000460576.5	955	2	37	496	37	-496	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGCCGCCATTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	95094930	95103854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_95094956_95103457
ENSMUSG00000030034.13_83098982_83101636_1	chr6	-	724	4	ISM	ENSMUSG00000030034.13	ENSMUST00000032109.5	1038	5	374	173	374	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCCATCGGGCCCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	83101636	83098981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83099346_83100974_83101145_83101287_83101407_83101565
ENSMUSG00000030034.13_83099180_83102110_1	chr6	-	767	5	FSM	ENSMUSG00000030034.13	ENSMUST00000032109.5	1038	5	-100	371	-100	-371	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGACAATTGAGCGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	83102110	83099179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_83099346_83100974_83101145_83101287_83101407_83101565_83101759_83101991
ENSMUSG00000030034.13_83101016_83102275_1	chr6	-	725	4	ISM	ENSMUSG00000030034.13	ENSMUST00000113935.9	1503	5	137	2270	137	-2207	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGAAGGAGATCAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	83102275	83101015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83101145_83101287_83101407_83101565_83101759_83101991
ENSMUSG00000030035.15_83096288_83096951_1	chr6	-	517	2	ISM	ENSMUSG00000030035.15	ENSMUST00000151393.7	837	5	1436	-129	1304	129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCTCCCATGGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	83096951	83096287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83096702_83096848
ENSMUSG00000030035.15_83096531_83098240_1	chr6	-	508	4	FSM	ENSMUSG00000030035.15	ENSMUST00000113936.10	1314	4	300	506	15	-114	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTCCTCCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	83098240	83096530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83098183
ENSMUSG00000030036.9_83092664_83094563_1	chr6	+	1277	4	FSM	ENSMUSG00000030036.9	ENSMUST00000032114.8	2780	4	187	1316	187	-1316	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCACCTCACCCGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	83092663	83094563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_83092908_83092999_83093230_83093608_83093806_83093957
ENSMUSG00000030041.10_82933529_82983321_1	chr6	+	874	6	ISM	ENSMUSG00000030041.10	ENST00000409585.5	1988	9	114	23958	114	-23843	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTCCCTGACCTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	82933528	82983321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298
ENSMUSG00000030041.10_82933557_82983396_1	chr6	+	921	6	ISM	ENSMUSG00000030041.10	ENST00000409585.5	1988	9	142	23883	142	-23768	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATCAACAACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	82933556	82983396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298
ENSMUSG00000030041.10_82933639_82983416_1	chr6	+	859	6	ISM	ENSMUSG00000030041.10	ENST00000409585.5	1988	9	224	23863	224	-23748	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCCTGTGTCACTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	82933638	82983416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298
ENSMUSG00000030041.10_82945057_83003319_1	chr6	+	866	6	ISM	ENSMUSG00000030041.10	ENST00000409585.5	1988	9	11642	3960	11642	-3845	internal_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGCCTGGCTTCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	82945056	83003319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178
ENSMUSG00000030041.10_82945095_83003352_1	chr6	+	861	6	ISM	ENSMUSG00000030041.10	ENST00000409585.5	1988	9	11680	3927	11680	-3812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCACCTGAAGACAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	82945094	83003352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178
ENSMUSG00000030041.10_82958869_83005445_1	chr6	+	856	6	ISM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	34986	1719	25454	-1719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAGCGCCCATGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	82958868	83005445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372
ENSMUSG00000030041.10_82980710_83006804_1	chr6	+	882	6	ISM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	56827	360	47295	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGCCCCACGTAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	82980709	83006804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
ENSMUSG00000030041.10_82982526_83006995_1	chr6	+	859	5	ISM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	58643	169	49111	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAAATGAGCTCCGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	82982525	83006995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
ENSMUSG00000030041.10_82983299_83007198_1	chr6	+	938	4	ISM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	59416	-34	49884	34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCAGCTCTGTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	82983298	83007198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_82983441_83003178_83003386_83005372_83005514_83006750
ENSMUSG00000030042.16_82624085_82628460_1	chr6	-	976	2	ISM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	1450	403	1391	-403	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTGAAGTGTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	82628460	82624084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_82625018_82628417
ENSMUSG00000030042.16_82624297_82629653_1	chr6	-	897	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	257	615	198	-615	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATGTGATATAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	82629653	82624296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
ENSMUSG00000030042.16_82624439_82629910_1	chr6	-	1012	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	0	757	0	-757	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTCATAGATATATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	82629910	82624438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
ENSMUSG00000030045.11_81939403_81942767_1	chr6	-	410	4	ISM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	172	4571	172	-4571	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAACCTGCTGTACTTAC	NA	NA	NA	NA	NA	NA	NA	NA	81942767	81939402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_81939479_81940914_81941050_81941219_81941339_81942687
ENSMUSG00000030051.11_87606731_87635547_1	chr6	-	1256	6	ISM	ENSMUSG00000030051.11	ENST00000303795.9	1792	10	13421	16	13421	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCTTTGATCTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	87635547	87606730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414
ENSMUSG00000030051.11_87606854_87635853_1	chr6	-	1164	7	ISM	ENSMUSG00000030051.11	ENST00000303795.9	1792	10	13115	139	13115	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTATTGCCTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	87635853	87606853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822
ENSMUSG00000030051.11_87606966_87640805_1	chr6	-	1308	8	ISM	ENSMUSG00000030051.11	ENST00000303795.9	1792	10	8163	251	8163	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTCACATTTGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	87640805	87606965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666
ENSMUSG00000030051.11_87618871_87648917_1	chr6	-	1252	8	ISM	ENSMUSG00000030051.11	ENST00000303795.9	1792	10	51	12156	51	-12140	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGGCTGCGCCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	87648917	87618870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
ENSMUSG00000030056.9_87795761_87798613_1	chr6	-	636	3	ISM	ENSMUSG00000030056.9	ENST00000393292.7	861	10	14120	-316	14120	316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCTATACTCTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	87798613	87795760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_87796186_87796538_87796626_87798489
ENSMUSG00000030056.9_87796077_87811976_1	chr6	-	827	9	NNC	ENSMUSG00000030056.9	novel	861	10	NA	NA	757	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCCAGAGCCCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	87811976	87796076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811930
ENSMUSG00000030056.9_87796077_87812777_1	chr6	-	901	10	ISM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	3003	4826	-44	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1048	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCCAGAGCCCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	87812777	87796076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709
ENSMUSG00000030056.9_87796077_87812777_2	chr6	-	899	10	NNC	ENSMUSG00000030056.9	novel	861	10	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	866	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCCAGAGCCCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	87812777	87796076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_87796180_87796538_87796626_87798489_87798612_87799317_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709
ENSMUSG00000030056.9_87796077_87812777_3	chr6	-	899	10	NNC	ENSMUSG00000030056.9	novel	861	10	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	969	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCCAGAGCCCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	87812777	87796076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_87796186_87796538_87796626_87798489_87798606_87799317_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709
ENSMUSG00000030057.16_87820064_87822775_1	chr6	-	1487	4	ISM	ENSMUSG00000030057.16	ENSMUST00000204890.3	1614	5	5237	0	5237	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	87822775	87820063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822655
ENSMUSG00000030057.16_87820064_87828009_1	chr6	-	1603	5	NNC	ENSMUSG00000030057.16	novel	1614	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5804	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	87828009	87820063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_87821139_87822103_87822303_87822446_87822532_87822655_87822776_87827885
ENSMUSG00000030057.16_87820175_87828015_1	chr6	-	1506	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204890.3	1614	5	-3	111	-3	-111	multi-exon	FALSE	canonical	NA	NA	NA	NA	2828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGGAGGAGGAAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	87828015	87820174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822655_87822776_87827885
ENSMUSG00000030057.16_87820266_87822692_1	chr6	-	1220	4	ISM	ENSMUSG00000030057.16	ENSMUST00000113617.3	952	6	5350	-603	5320	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTGCTGTAATCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	87822692	87820265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637
ENSMUSG00000030057.16_87820312_87822750_1	chr6	-	1232	4	ISM	ENSMUSG00000030057.16	ENSMUST00000113617.3	952	6	5292	-557	5262	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGATGTTATTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	87822750	87820311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637
ENSMUSG00000030057.16_87820473_87828044_1	chr6	-	1255	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	44	876	-2	396	multi-exon	FALSE	canonical	NA	NA	NA	NA	1893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCCCAGTGACGATGC	NA	NA	NA	NA	NA	NA	NA	NA	87828044	87820472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827885
ENSMUSG00000030058.18_87864796_87889594_1	chr6	+	3157	24	FSM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	0	983	0	-983	multi-exon	TRUE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGGGCCTCCACTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	87864795	87889594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ENSMUSG00000030058.18_87864910_87889619_1	chr6	+	3068	24	FSM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	114	958	0	-958	multi-exon	FALSE	canonical	NA	NA	NA	NA	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCCCTTCACCAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	87864909	87889619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ENSMUSG00000030058.18_87866052_87889808_1	chr6	+	3113	23	ISM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	1256	769	1142	-769	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGGGAAAAACAGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	87866051	87889808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ENSMUSG00000030058.18_87866935_87890026_1	chr6	+	3199	21	ISM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	2139	551	2025	-551	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCGCCTAACCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	87866934	87890026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ENSMUSG00000030058.18_87869188_87890234_1	chr6	+	3176	18	ISM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	4392	343	4278	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAACGTGGTGTGAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	87869187	87890234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ENSMUSG00000030058.18_87870808_87890389_1	chr6	+	3121	16	ISM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	6012	188	5898	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTCTGCCTCATTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	87870807	87890389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ENSMUSG00000030058.18_87870925_87890577_1	chr6	+	3279	15	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	6015	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCAGCCTCCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	87870924	87890577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ENSMUSG00000030059.16_97131736_97137267_1	chr6	-	1168	5	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	18816	1778	18816	-1778	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAGAAGTCACACTGAC	NA	NA	NA	NA	NA	NA	NA	NA	97137267	97131735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203
ENSMUSG00000030059.16_97132010_97140537_1	chr6	-	1244	8	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	15546	2052	15546	-2052	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTGGTGCCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	97140537	97132009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479
ENSMUSG00000030059.16_97132109_97140581_1	chr6	-	1189	8	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	15502	2151	15502	-2151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTTTATTTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	97140581	97132108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479
ENSMUSG00000030059.16_97132227_97141076_1	chr6	-	1193	9	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	15007	2269	15007	-2269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGATTTGCTGTAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	97141076	97132226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009
ENSMUSG00000030059.16_97132334_97144257_1	chr6	-	1160	10	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	11826	2376	11826	-2376	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACAAAGGCTCAGTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	97144257	97132333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209
ENSMUSG00000030059.16_97132398_97144315_1	chr6	-	1154	10	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	11768	2440	11768	-2440	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACTTCGCTTGGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	97144315	97132397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209
ENSMUSG00000030059.16_97135087_97145810_1	chr6	-	1207	10	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	10273	5129	10273	-5129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGGGAGCTGGATCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	97145810	97135086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708
ENSMUSG00000030059.16_97138394_97150352_1	chr6	-	1170	9	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	5731	8436	5731	-8436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTCAGGCCCAGCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	97150352	97138393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260
ENSMUSG00000030059.16_97140498_97152850_1	chr6	-	1156	9	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	3233	10540	3233	-10540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTCTGATAGGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	97152850	97140497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730
ENSMUSG00000030059.16_97144244_97153174_1	chr6	-	1214	7	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	2909	14286	2909	-14286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCGTCAGCAGCAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	97153174	97144243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730
ENSMUSG00000030059.16_97145123_97153333_1	chr6	-	1176	6	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	2750	15165	2750	-15165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACTTCAGGTAGACATGGA	NA	NA	NA	NA	NA	NA	NA	NA	97153333	97145122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730
ENSMUSG00000030059.16_97149205_97153698_1	chr6	-	1168	3	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	2385	19247	2385	-19247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGCAAGGAGAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	97153698	97149204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97149301_97150260_97150365_97152730
ENSMUSG00000030059.16_97152854_97155998_1	chr6	-	1232	2	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	85	22896	85	-22896	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATATTGGCTTCTCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	97155998	97152853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97153930_97155842
ENSMUSG00000030060.15_87890961_87894873_1	chr6	+	291	3	ISM	ENSMUSG00000030060.15	ENSMUST00000032141.14	1464	7	44	18738	44	-18738	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTGGTTCAAAGAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	87890960	87894873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87890994_87891472_87891678_87894820
ENSMUSG00000030060.15_87891609_87898571_1	chr6	+	277	3	ISM	ENSMUSG00000030060.15	ENSMUST00000113606.2	1572	6	321	15040	321	-15040	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGGGAACAAACCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	87891608	87898571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87891678_87894820_87894965_87898507
ENSMUSG00000030060.15_87894906_87902680_1	chr6	+	252	3	ISM	ENSMUSG00000030060.15	ENSMUST00000113606.2	1572	6	3618	10931	3618	-10931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAATGGCAGGGATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	87894905	87902680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87894965_87898507_87898634_87902613
ENSMUSG00000030060.15_87898594_87910274_1	chr6	+	270	3	ISM	ENSMUSG00000030060.15	ENSMUST00000113606.2	1572	6	7306	3337	7306	-3337	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGGTCGCCACTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	87898593	87910274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87898634_87902613_87902793_87910223
ENSMUSG00000030060.15_87902747_87913103_1	chr6	+	271	3	ISM	ENSMUSG00000030060.15	ENSMUST00000113606.2	1572	6	11459	508	11459	-508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGTGGCTGGCTACAA	NA	NA	NA	NA	NA	NA	NA	NA	87902746	87913103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87902793_87910223_87910417_87913071
ENSMUSG00000030060.15_87910244_87913185_1	chr6	+	287	2	ISM	ENSMUSG00000030060.15	ENSMUST00000113606.2	1572	6	18956	426	18956	-426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCCAGTTTCTCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	87910243	87913185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87910417_87913071
ENSMUSG00000030060.15_87910301_87913236_1	chr6	+	281	2	ISM	ENSMUSG00000030060.15	ENSMUST00000113606.2	1572	6	19013	375	19013	-375	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTTCCTGGATCGATG	NA	NA	NA	NA	NA	NA	NA	NA	87910300	87913236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87910417_87913071
ENSMUSG00000030060.15_87910366_87913275_1	chr6	+	255	2	ISM	ENSMUSG00000030060.15	ENSMUST00000113606.2	1572	6	19078	336	19078	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAGCCCATGGCCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	87910365	87913275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87910417_87913071
ENSMUSG00000030061.17_97160631_97168551_1	chr6	-	2027	11	ISM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	13970	0	13970	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATTGCAATTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	97168551	97160630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486
ENSMUSG00000030061.17_97160779_97173878_1	chr6	-	2004	13	ISM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	8643	148	8643	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTATAGTCAAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	97173878	97160778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797
ENSMUSG00000030061.17_97160968_97180467_1	chr6	-	2012	16	ISM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	2141	0	2054	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAAAGTATATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	97180467	97160967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434
ENSMUSG00000030061.17_97160968_97180537_1	chr6	-	2082	16	ISM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	2071	0	1984	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAAAGTATATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	97180537	97160967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434
ENSMUSG00000030061.17_97161151_97180555_1	chr6	-	1917	16	ISM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	2053	183	1966	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTCATACCTGTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	97180555	97161150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434
ENSMUSG00000030061.17_97166715_97182308_1	chr6	-	776	9	ISM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	300	5747	213	-5747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTTAACAATCTAGACT	NA	NA	NA	NA	NA	NA	NA	NA	97182308	97166714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266
ENSMUSG00000030061.17_97168052_97182521_1	chr6	-	703	9	ISM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	87	7084	0	-7084	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAGAAAAGTTCCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	97182521	97168051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ENSMUSG00000030062.8_88061545_88082286_1	chr6	+	3546	10	NNC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1756	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTATGCTTGTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	88061544	88082286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_88061777_88065331_88065397_88066976_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
ENSMUSG00000030062.8_88061545_88082286_2	chr6	+	3547	10	NNC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTATGCTTGTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	88061544	88082286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080351
ENSMUSG00000030062.8_88061545_88082291_1	chr6	+	3557	10	FSM	ENSMUSG00000030062.8	ENSMUST00000032143.8	3633	10	81	-5	81	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	4667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATGCTTGTTAGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	88061544	88082291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
ENSMUSG00000030062.8_88061545_88082291_2	chr6	+	3552	10	NNC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	81	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2730	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATGCTTGTTAGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	88061544	88082291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_88061777_88065331_88065397_88066970_88067273_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
ENSMUSG00000030062.8_88061545_88082291_3	chr6	+	3551	10	NNC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	81	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATGCTTGTTAGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	88061544	88082291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_88061777_88065331_88065397_88066976_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
ENSMUSG00000030062.8_88061545_88082291_4	chr6	+	3552	10	NNC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	81	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATGCTTGTTAGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	88061544	88082291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080351
ENSMUSG00000030062.8_88061545_88082291_5	chr6	+	3551	10	NNC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	81	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2052	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATGCTTGTTAGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	88061544	88082291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_88061777_88065337_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
ENSMUSG00000030067.18_98906950_98918125_1	chr6	-	653	4	ISM	ENSMUSG00000030067.18	ENST00000648426.1	2142	16	221865	-54	87094	54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACGTCAAAAGTTAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	98918125	98906949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_98907196_98912234_98912402_98916679_98916750_98917955
ENSMUSG00000030067.18_98906950_98992471_1	chr6	-	1709	13	ISM	ENSMUSG00000030067.18	ENSMUST00000074346.12	2118	16	147508	-101	12748	54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACGTCAAAAGTTAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	98992471	98906949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_98907196_98912234_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987016_98992384
ENSMUSG00000030067.18_98906950_99052847_1	chr6	-	1655	13	NIC	ENSMUSG00000030067.18	novel	2118	16	NA	NA	48	54	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACGTCAAAAGTTAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	99052847	98906949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_98907196_98912234_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987016_99052814
ENSMUSG00000030067.18_98906950_99052899_1	chr6	-	1707	13	NIC	ENSMUSG00000030067.18	novel	2118	16	NA	NA	-4	54	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACGTCAAAAGTTAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	99052899	98906949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_98907196_98912234_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987016_99052814
ENSMUSG00000030067.18_98907132_98922354_1	chr6	-	620	6	ISM	ENSMUSG00000030067.18	ENST00000648426.1	2142	16	217636	128	82865	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGACAACAGCCAACCACAG	NA	NA	NA	NA	NA	NA	NA	NA	98922354	98907131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_98907196_98912234_98912402_98916679_98916750_98917955_98918126_98921579_98921682_98922307
ENSMUSG00000030067.18_98907132_99052867_1	chr6	-	1718	15	ISM	ENSMUSG00000030067.18	ENSMUST00000074346.12	2118	16	87112	81	28	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGACAACAGCCAACCACAG	NA	NA	NA	NA	NA	NA	NA	NA	99052867	98907131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_98907196_98912234_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987016_98992384_98992472_98993488_98993627_99052814
ENSMUSG00000030067.18_98912263_98922537_1	chr6	-	604	6	ISM	ENSMUSG00000030067.18	ENST00000648426.1	2142	16	217453	5259	82682	-5212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGGCAGATCCCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	98922537	98912262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_98912402_98916679_98916750_98917955_98918126_98921579_98921682_98922307_98922388_98922494
ENSMUSG00000030067.18_98912290_99139811_1	chr6	-	1662	15	NIC	ENSMUSG00000030067.18	novel	2118	16	NA	NA	168	-5239	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACCAACAGCAACGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	99139811	98912289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987016_98992384_98992472_98993488_98993627_99052814_99052899_99139779
ENSMUSG00000030067.18_98912310_98922600_1	chr6	-	620	6	ISM	ENSMUSG00000030067.18	ENST00000648426.1	2142	16	217390	5306	82619	-5259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAACGGGGCCATGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	98922600	98912309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_98912402_98916679_98916750_98917955_98918126_98921579_98921682_98922307_98922388_98922494
ENSMUSG00000030067.18_98912334_99139877_1	chr6	-	1684	15	NIC	ENSMUSG00000030067.18	novel	2118	16	NA	NA	102	-5283	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCAGTGCCATCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	99139877	98912333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987016_98992384_98992472_98993488_98993627_99052814_99052899_99139779
ENSMUSG00000030067.18_98912375_98922637_1	chr6	-	592	6	ISM	ENSMUSG00000030067.18	ENST00000648426.1	2142	16	217353	5371	82582	-5324	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACACTACCGCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	98922637	98912374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_98912402_98916679_98916750_98917955_98918126_98921579_98921682_98922307_98922388_98922494
ENSMUSG00000030067.18_98912378_99139979_1	chr6	-	1742	15	NIC	ENSMUSG00000030067.18	novel	2118	16	NA	NA	0	-5327	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTACACTACCGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	99139979	98912377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987016_98992384_98992472_98993488_98993627_99052814_99052899_99139779
ENSMUSG00000030067.18_98918037_98943054_1	chr6	-	624	6	ISM	ENSMUSG00000030067.18	ENST00000648426.1	2142	16	196936	11033	62165	-10986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATACGTGGCCGCCATA	NA	NA	NA	NA	NA	NA	NA	NA	98943054	98918036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_98918126_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987
ENSMUSG00000030067.18_98918497_99237381_1	chr6	-	1735	14	NIC	ENSMUSG00000030067.18	novel	2785	20	NA	NA	6095	-11446	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGTCCGCCATGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	99237381	98918496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987016_98992384_98992472_98993488_98993627_99052814_99052899_99139779_99139991_99237305
ENSMUSG00000030067.18_98921657_99412306_1	chr6	-	1760	15	NIC	ENSMUSG00000030067.18	novel	2785	20	NA	NA	0	-14606	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTAACACTAAACGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	99412306	98921656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987016_98992384_98992472_98993488_98993627_99052814_99052899_99139779_99139991_99237305_99237381_99285304_99285400_99412176
ENSMUSG00000030067.18_98922495_99497652_1	chr6	-	1746	14	NIC	ENSMUSG00000030067.18	novel	2785	20	NA	NA	306	-15444	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTACTCTCTGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	99497652	98922494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987016_98992384_98992472_98993488_98993627_99052814_99052899_99139779_99139991_99237305_99237381_99285304_99285400_99412176_99412307_99497561
ENSMUSG00000030067.18_98922631_99497704_1	chr6	-	1662	14	NIC	ENSMUSG00000030067.18	novel	2785	20	NA	NA	254	-15580	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACTCCAACAACCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	99497704	98922630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987016_98992384_98992472_98993488_98993627_99052814_99052899_99139779_99139991_99237305_99237381_99285304_99285400_99412176_99412307_99497561
ENSMUSG00000030067.18_98922679_99497764_1	chr6	-	1674	14	NIC	ENSMUSG00000030067.18	novel	2785	20	NA	NA	194	-15628	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACCCTCTCCAAGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	99497764	98922678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987016_98992384_98992472_98993488_98993627_99052814_99052899_99139779_99139991_99237305_99237381_99285304_99285400_99412176_99412307_99497561
ENSMUSG00000030067.18_98942988_99497958_1	chr6	-	1766	12	NIC	ENSMUSG00000030067.18	novel	2785	20	NA	NA	0	-35937	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCCACATTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	99497958	98942987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_98943076_98955093_98955199_98980160_98980366_98986864_98987016_98992384_98992472_98993488_98993627_99052814_99052899_99139779_99139991_99237305_99237381_99285304_99285400_99412176_99412307_99497561
ENSMUSG00000030067.18_98986894_99073446_1	chr6	-	791	5	NIC	ENSMUSG00000030067.18	novel	7029	18	NA	NA	198	-79843	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTCCCCTCCAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	99073446	98986893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_98987016_98992384_98992472_98993488_98993627_99052814_99052911_99073098
ENSMUSG00000030067.18_98986894_99139992_1	chr6	-	644	5	NIC	ENSMUSG00000030067.18	novel	2785	20	NA	NA	-2	-79843	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTCCCCTCCAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	99139992	98986893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_98987016_98992384_98992472_98993488_98993627_99052814_99052899_99139779
ENSMUSG00000030079.16_88442391_88468600_1	chr6	+	1238	9	ISM	ENSMUSG00000030079.16	ENSMUST00000032165.16	1675	11	0	5954	0	-5954	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCCCGGAATCTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	88442390	88468600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497
ENSMUSG00000030079.16_88442602_88473435_1	chr6	+	1073	10	ISM	ENSMUSG00000030079.16	ENSMUST00000032165.16	1675	11	211	1119	211	-1119	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGCTGAACCACCTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	88442601	88473435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389
ENSMUSG00000030079.16_88444593_88474379_1	chr6	+	1195	10	ISM	ENSMUSG00000030079.16	ENSMUST00000032165.16	1675	11	2202	175	2202	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCGCACCCAGAGACGGA	NA	NA	NA	NA	NA	NA	NA	NA	88444592	88474379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
ENSMUSG00000030079.16_88444598_88474267_1	chr6	+	1078	10	ISM	ENSMUSG00000030079.16	ENSMUST00000032165.16	1675	11	2207	287	2207	-287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATTGAGAAGGAGCACGT	NA	NA	NA	NA	NA	NA	NA	NA	88444597	88474267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
ENSMUSG00000030079.16_88456108_88474554_1	chr6	+	1196	8	ISM	ENSMUSG00000030079.16	ENSMUST00000032165.16	1675	11	13717	0	13717	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1012	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGTTTTTATATTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	88456107	88474554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
ENSMUSG00000030082.15_88480561_88495420_1	chr6	-	2952	11	ISM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	467	0	32	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCAGAAAGCTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	88495420	88480560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352
ENSMUSG00000030082.15_88480561_88495755_1	chr6	-	3040	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	132	0	132	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCAGAAAGCTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	88495755	88480560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ENSMUSG00000030082.15_88480587_88495755_1	chr6	-	3014	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	132	26	132	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	3390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCTCGTCATCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	88495755	88480586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ENSMUSG00000030082.15_88480729_88495755_1	chr6	-	2872	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	132	168	132	-168	multi-exon	FALSE	canonical	NA	NA	NA	NA	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGACCTGGTGGCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	88495755	88480728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ENSMUSG00000030082.15_88480729_88495885_1	chr6	-	3002	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	2	168	2	-168	multi-exon	FALSE	canonical	NA	NA	NA	NA	1447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGACCTGGTGGCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	88495885	88480728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ENSMUSG00000030083.12_88812906_88815420_1	chr6	-	957	4	ISM	ENSMUSG00000030083.12	ENST00000453791.6	1379	11	2491	-318	2491	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGGGACCTGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	88815420	88812905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361
ENSMUSG00000030083.12_88813130_88815710_1	chr6	-	864	5	ISM	ENSMUSG00000030083.12	ENST00000453791.6	1379	11	2201	-94	2201	94	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGGATGAGCCTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	88815710	88813129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619
ENSMUSG00000030083.12_88813260_88816683_1	chr6	-	1160	9	ISM	ENSMUSG00000030083.12	ENST00000453791.6	1379	11	1228	36	1228	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTCGTGTCCATTGGC	NA	NA	NA	NA	NA	NA	NA	NA	88816683	88813259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608
ENSMUSG00000030083.12_88813260_88816704_1	chr6	-	1174	9	NNC	ENSMUSG00000030083.12	novel	1379	11	NA	NA	1207	-36	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTCGTGTCCATTGGC	NA	NA	NA	NA	NA	NA	NA	NA	88816704	88813259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_88813428_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608
ENSMUSG00000030083.12_88813405_88817737_1	chr6	-	1131	10	ISM	ENSMUSG00000030083.12	ENST00000453791.6	1379	11	174	181	174	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGGGAAGAGGCGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	88817737	88813404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691
ENSMUSG00000030083.12_88813405_88817883_1	chr6	-	1170	11	FSM	ENSMUSG00000030083.12	ENST00000453791.6	1379	11	28	181	28	-181	multi-exon	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGGGAAGAGGCGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	88817883	88813404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817854
ENSMUSG00000030083.12_88813405_88817887_1	chr6	-	1246	10	NIC	ENSMUSG00000030083.12	novel	1379	11	NA	NA	24	-181	intron_retention	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGGGAAGAGGCGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	88817887	88813404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817854
ENSMUSG00000030083.12_88815097_88817871_1	chr6	-	965	9	ISM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	1011	2201	40	-1873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCGCCCAGCAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	88817871	88815096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819
ENSMUSG00000030083.12_88815436_88818812_1	chr6	-	793	9	ISM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	70	2540	70	-2212	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCCCGATGGCTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	88818812	88815435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88818750
ENSMUSG00000030086.17_89360128_89572586_1	chr6	-	951	8	FSM	ENSMUSG00000030086.17	ENST00000290913.8	944	8	-8	1	-8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCACTTCTGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	89572586	89360127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89444371_89444456_89544568_89544714_89546324_89546395_89551476_89551573_89572440
ENSMUSG00000030086.17_89360128_89572634_1	chr6	-	1119	8	NNC	ENSMUSG00000030086.17	novel	1121	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCACTTCTGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	89572634	89360127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_89360324_89361585_89361722_89396729_89396801_89444371_89444456_89544568_89544714_89546324_89546395_89551349_89551573_89572440
ENSMUSG00000030086.17_89360128_89572634_2	chr6	-	1117	8	NNC	ENSMUSG00000030086.17	novel	1121	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCACTTCTGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	89572634	89360127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_89360331_89361585_89361722_89396729_89396801_89444371_89444456_89544568_89544714_89546324_89546386_89551349_89551573_89572440
ENSMUSG00000030086.17_89360128_89572634_3	chr6	-	1121	8	NNC	ENSMUSG00000030086.17	novel	1121	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCACTTCTGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	89572634	89360127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_89360331_89361585_89361722_89396729_89396801_89444371_89444451_89544568_89544714_89546324_89546395_89551349_89551573_89572440
ENSMUSG00000030086.17_89360128_89572634_4	chr6	-	1117	8	NNC	ENSMUSG00000030086.17	novel	1121	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCACTTCTGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	89572634	89360127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_89360331_89361585_89361722_89396729_89396792_89444371_89444456_89544568_89544714_89546324_89546395_89551349_89551573_89572440
ENSMUSG00000030088.16_90534288_90566361_1	chr6	+	1699	15	ISM	ENSMUSG00000030088.16	ENST00000393431.6	2480	20	101	9565	101	-9565	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATAGGGTTCACAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	90534287	90566361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90554766_90554838_90557457_90557564_90560154_90560243_90566318
ENSMUSG00000030088.16_90536277_90567820_1	chr6	+	1752	15	ISM	ENSMUSG00000030088.16	ENST00000455064.6	2580	21	2090	8106	2090	-8106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTGGGCCTGGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	90536276	90567820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719
ENSMUSG00000030088.16_90536382_90568819_1	chr6	+	1683	16	ISM	ENSMUSG00000030088.16	ENST00000455064.6	2580	21	2195	7107	2195	-7107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGCGGCAGGCCGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	90536381	90568819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782
ENSMUSG00000030088.16_90536440_90568878_1	chr6	+	1684	16	ISM	ENSMUSG00000030088.16	ENST00000455064.6	2580	21	2253	7048	2253	-7048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTAAGTTCCAGGCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	90536439	90568878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782
ENSMUSG00000030088.16_90536807_90571505_1	chr6	+	1710	16	ISM	ENSMUSG00000030088.16	ENST00000455064.6	2580	21	2620	4421	2620	-4421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGATACCAACCATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	90536806	90571505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464
ENSMUSG00000030088.16_90536873_90571544_1	chr6	+	1683	16	ISM	ENSMUSG00000030088.16	ENST00000455064.6	2580	21	2686	4382	2686	-4382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGGAAGCTGGTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	90536872	90571544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464
ENSMUSG00000030088.16_90536927_90571591_1	chr6	+	1676	16	ISM	ENSMUSG00000030088.16	ENST00000455064.6	2580	21	2740	4335	2740	-4335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACACTGGTCTGTGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	90536926	90571591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464
ENSMUSG00000030088.16_90539600_90573956_1	chr6	+	1776	16	ISM	ENSMUSG00000030088.16	ENST00000455064.6	2580	21	5413	1970	5413	-1970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTATCCACCATGACTC	NA	NA	NA	NA	NA	NA	NA	NA	90539599	90573956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849
ENSMUSG00000030088.16_90540392_90575227_1	chr6	+	1687	16	ISM	ENSMUSG00000030088.16	ENST00000455064.6	2580	21	6205	699	6205	-699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCACTCGGGATATCAACA	NA	NA	NA	NA	NA	NA	NA	NA	90540391	90575227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167
ENSMUSG00000030088.16_90541326_90575368_1	chr6	+	1785	15	ISM	ENSMUSG00000030088.16	ENST00000455064.6	2580	21	7139	558	7139	-558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGAAACCCTGTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	90541325	90575368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167
ENSMUSG00000030088.16_90543620_90575926_1	chr6	+	1703	15	ISM	ENSMUSG00000030088.16	ENST00000455064.6	2580	21	9433	0	9433	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGACTGTGATACTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	90543619	90575926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ENSMUSG00000030092.15_104545996_104678174_1	chr6	+	414	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	75787	162188	75787	-162035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGAGTGGTACTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	104545995	104678174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104546055_104619857_104619985_104627350_104627527_104678122
ENSMUSG00000030092.15_104619871_104703052_1	chr6	+	405	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	149662	137310	149662	-137157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAATGATAGCCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	104619870	104703052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104619985_104627350_104627527_104678122_104678219_104703033
ENSMUSG00000030092.15_104619919_104703116_1	chr6	+	421	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	149710	137246	149710	-137093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTACTTTGCCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	104619918	104703116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104619985_104627350_104627527_104678122_104678219_104703033
ENSMUSG00000030092.15_104627472_104705281_1	chr6	+	410	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	157263	135081	157263	-134928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGCAAAGGATTCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	104627471	104705281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104627527_104678122_104678219_104703033_104703238_104705226
ENSMUSG00000030092.15_104678138_104744701_1	chr6	+	420	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	207929	95661	207929	-95508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAAGCCCGATGCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	104678137	104744701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104678219_104703033_104703238_104705226_104705330_104744669
ENSMUSG00000030092.15_104705273_104751461_1	chr6	+	412	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	235064	88901	235064	-88748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACCATGCTGAACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	104705272	104751461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104705330_104744669_104744855_104749512_104749650_104751428
ENSMUSG00000030092.15_104744826_104753365_1	chr6	+	399	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	274617	86997	274617	-86844	internal_fragment	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGATTTCCTGGAAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	104744825	104753365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104744855_104749512_104749650_104751428_104751559_104753262
ENSMUSG00000030092.15_104751487_104809536_1	chr6	+	429	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	281278	30826	281278	-30673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGACCCCACCATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	104751486	104809536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104751559_104753262_104753414_104781279_104781408_104809458
ENSMUSG00000030092.15_104753352_104810059_1	chr6	+	438	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	283143	30303	283143	-30150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACACTAGAACGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	104753351	104810059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104753414_104781279_104781408_104809458_104809635_104809987
ENSMUSG00000030092.15_104781329_104810806_1	chr6	+	436	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	311120	29556	311120	-29403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGACCAGGTCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	104781328	104810806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104781408_104809458_104809635_104809987_104810106_104810743
ENSMUSG00000030092.15_104809498_104812678_1	chr6	+	428	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	339289	27684	339289	-27531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGACAGACATACAATGC	NA	NA	NA	NA	NA	NA	NA	NA	104809497	104812678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104809635_104809987_104810106_104810743_104810903_104812664
ENSMUSG00000030092.15_104809571_104812723_1	chr6	+	400	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	339362	27639	339362	-27486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAATACGAATTTCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	104809570	104812723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104809635_104809987_104810106_104810743_104810903_104812664
ENSMUSG00000030092.15_104810793_104822687_1	chr6	+	402	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	340584	17675	340584	-17522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCCTGGATGAAAGAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	104810792	104822687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104810903_104812664_104812815_104815715_104815787_104822616
ENSMUSG00000030092.15_104810846_104822738_1	chr6	+	400	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	340637	17624	340637	-17471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAATGAAAGCATCATGC	NA	NA	NA	NA	NA	NA	NA	NA	104810845	104822738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104810903_104812664_104812815_104815715_104815787_104822616
ENSMUSG00000030092.15_104812663_104822851_1	chr6	+	458	3	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	342454	17511	342454	-17358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTGCATTCAGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	104812662	104822851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104812815_104815715_104815787_104822616
ENSMUSG00000030092.15_104812776_104823046_1	chr6	+	406	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	342567	17316	342567	-17163	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGAATGCTATTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	104812775	104823046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104812815_104815715_104815787_104822616_104822852_104822985
ENSMUSG00000030092.15_104822712_104825124_1	chr6	+	402	3	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	352503	15238	352503	-15085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCAAGTCTGCCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	104822711	104825124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104822852_104822985_104823102_104824978
ENSMUSG00000030092.15_104822811_104836399_1	chr6	+	404	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	352602	3963	352602	-3810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGGAGCATGTAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	104822810	104836399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104822852_104822985_104823102_104824978_104825166_104836339
ENSMUSG00000030092.15_104823046_104838807_1	chr6	+	399	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	352837	1555	352837	-1402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAATAATACATCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	104823045	104838807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104823102_104824978_104825166_104836339_104836453_104838764
ENSMUSG00000030092.15_104825131_104840217_1	chr6	+	447	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	354922	145	354922	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGCAAACCATTCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	104825130	104840217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104825166_104836339_104836453_104838764_104838934_104840087
ENSMUSG00000030092.15_104838763_104840362_1	chr6	+	446	2	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	368554	0	368554	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACACTTTGAATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	104838762	104840362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_104838934_104840087
ENSMUSG00000030095.11_91450741_91465287_1	chr6	+	2689	12	FSM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	56	158	56	-158	multi-exon	FALSE	canonical	NA	NA	NA	NA	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTCTGTGTAACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	91450740	91465287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_91450881_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ENSMUSG00000030095.11_91450741_91465332_1	chr6	+	2734	12	FSM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	56	113	56	-113	multi-exon	FALSE	canonical	NA	NA	NA	NA	1485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAGTTAAGAGCAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	91450740	91465332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_91450881_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ENSMUSG00000030095.11_91450741_91465333_1	chr6	+	2735	12	FSM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	56	112	56	-112	multi-exon	FALSE	canonical	NA	NA	NA	NA	1502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTTAAGAGCAAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	91450740	91465333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_91450881_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ENSMUSG00000030095.11_91450847_91465445_1	chr6	+	2741	12	FSM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	162	0	162	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTCGTTTGCTGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	91450846	91465445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_91450881_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ENSMUSG00000030095.11_91454227_91465445_1	chr6	+	2707	11	ISM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	3542	0	3542	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTCGTTTGCTGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	91454226	91465445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ENSMUSG00000030096.9_91661034_91734368_1	chr6	+	4507	15	FSM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	0	1679	0	-1679	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGAGTGATGTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	91661033	91734368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91661130_91734431_1	chr6	+	4468	15	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	96	-1616	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCCTGATCCAAGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	91661129	91734431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718028_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91675965_91734591_1	chr6	+	4479	14	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	14931	1456	14931	-1456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGCCTTCCCTGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	91675964	91734591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91700301_91734681_1	chr6	+	4476	13	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	39267	-1366	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTACCGCCCTGCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	91700300	91734681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718028_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91700342_91734717_1	chr6	+	4477	13	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	39308	1330	39308	-1330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTCCTTCCTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	91700341	91734717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91700361_91734775_1	chr6	+	4510	13	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	39327	-1272	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAAGTTGTACCACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	91700360	91734775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718028_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91700394_91734770_1	chr6	+	4478	13	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	39360	1277	39360	-1277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCCTCAAGTTGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	91700393	91734770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91700446_91734828_1	chr6	+	4478	13	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	39412	-1219	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTAGCTAGGGTGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	91700445	91734828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718028_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91701821_91734880_1	chr6	+	4481	12	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	40787	1167	40787	-1167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGGAAGTAGCCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	91701820	91734880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91701940_91734990_1	chr6	+	4472	12	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	40906	1057	40906	-1057	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGAGAAAGCAGCACTCG	NA	NA	NA	NA	NA	NA	NA	NA	91701939	91734990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91703021_91735046_1	chr6	+	4476	11	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	41987	-1001	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCACCACCATGGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	91703020	91735046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_91703228_91712071_91712205_91716857_91716993_91717929_91718028_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91703082_91735095_1	chr6	+	4464	11	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	42048	-952	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATGCTCTAGCAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	91703081	91735095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_91703228_91712071_91712205_91716857_91716993_91717929_91718028_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91703105_91735134_1	chr6	+	4486	11	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	42071	913	42071	-913	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTCTCTCCAAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	91703104	91735134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91703117_91735137_1	chr6	+	4477	11	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	42083	910	42083	-910	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTCTCCAAGATGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	91703116	91735137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91703146_91735208_1	chr6	+	4519	11	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	42112	839	42112	-839	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACCCCTGTCCCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	91703145	91735208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91712109_91735297_1	chr6	+	4483	10	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	51075	-750	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATACTCCAAGATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	91712108	91735297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_91712205_91716857_91716993_91717929_91718028_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91712162_91735347_1	chr6	+	4486	10	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	51128	700	51128	-700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCCCCTCCTCCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	91712161	91735347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91717939_91735538_1	chr6	+	4490	8	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	56905	509	56905	-509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATTAATCTTTCCAATC	NA	NA	NA	NA	NA	NA	NA	NA	91717938	91735538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91718000_91735586_1	chr6	+	4477	8	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	56966	461	56966	-461	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAAGCTGAGAACGTG	NA	NA	NA	NA	NA	NA	NA	NA	91717999	91735586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91718236_91735722_1	chr6	+	4502	7	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	57202	325	57202	-325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCACACACACACACATACA	NA	NA	NA	NA	NA	NA	NA	NA	91718235	91735722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91721966_91735840_1	chr6	+	4504	6	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	60932	207	60932	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGACCTGTCTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	91721965	91735840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030096.9_91725337_91736047_1	chr6	+	4643	5	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	64303	0	64303	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGGTGTGTTTCGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	91725336	91736047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030101.16_108083989_108162517_1	chr6	-	2561	9	NNC	ENSMUSG00000030101.16	novel	2593	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTTCACTTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	108162517	108083988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_108085548_108095580_108095641_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150386_108152948_108153123_108162253
ENSMUSG00000030102.12_108333432_108492798_1	chr6	+	453	5	ISM	ENSMUSG00000030102.12	ENST00000544951.6	2799	20	143173	34487	143173	-34487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCGGTCCTGGCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	108333431	108492798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_108333499_108340570_108340667_108342259_108342305_108487655_108487821_108492718
ENSMUSG00000030102.12_108496331_108526783_1	chr6	+	474	4	ISM	ENSMUSG00000030102.12	ENST00000544951.6	2799	20	306072	502	306072	-502	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCAGCCGGCCTAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	108496330	108526783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_108496412_108500248_108500410_108518863_108519026_108526713
ENSMUSG00000030103.12_108637590_108641560_1	chr6	+	787	5	FSM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	0	2326	0	1900	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCAGCTCGTCACTCATC	NA	NA	NA	NA	NA	NA	NA	NA	108637589	108641560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
ENSMUSG00000030103.12_108637835_108641845_1	chr6	+	827	5	FSM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	245	2041	0	-2041	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCATGGACGCAGGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	108637834	108641845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
ENSMUSG00000030103.12_108639541_108642143_1	chr6	+	769	2	ISM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	1951	1743	1706	-1743	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGCTTCATGAACCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	108639540	108642143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_108639606_108641439
ENSMUSG00000030105.9_108760060_108799666_1	chr6	+	1870	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	0	2573	0	932	multi-exon	TRUE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTTTGCTATGATACAGA	NA	NA	NA	NA	NA	NA	NA	NA	108760059	108799666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ENSMUSG00000030105.9_108760060_108799732_1	chr6	+	1936	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	0	2507	0	998	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACGTACATAAAGGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	108760059	108799732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ENSMUSG00000030105.9_108760226_108799814_1	chr6	+	1852	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	166	2425	166	1080	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGCTTATGTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	108760225	108799814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ENSMUSG00000030105.9_108790587_108799929_1	chr6	+	1855	6	ISM	ENSMUSG00000030105.9	ENSMUST00000204483.2	695	7	18729	-1195	18729	1195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTTTACTGAGTACCGT	NA	NA	NA	NA	NA	NA	NA	NA	108790586	108799929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ENSMUSG00000030105.9_108795513_108800242_1	chr6	+	1841	2	ISM	ENSMUSG00000030105.9	ENSMUST00000204483.2	695	7	23655	-1508	23655	1508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAACTAAGCGGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	108795512	108800242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_108795575_108798463
ENSMUSG00000030108.15_121279657_121313944_1	chr6	+	1411	11	NNC	ENSMUSG00000030108.15	novel	1580	12	NA	NA	3	-471	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGGAAAGCAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	121279656	121313944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_121279863_121301223_121301309_121301985_121302116_121303070_121303206_121309321_121309426_121310277_121310403_121311405_121311519_121311797_121311936_121312578_121312682_121312998_121313100_121313773
ENSMUSG00000030108.15_121279699_121313944_1	chr6	+	1370	11	NNC	ENSMUSG00000030108.15	novel	1580	12	NA	NA	45	-471	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGGAAAGCAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	121279698	121313944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_121279863_121301223_121301309_121301982_121302116_121303070_121303206_121309321_121309426_121310277_121310403_121311405_121311519_121311797_121311936_121312580_121312682_121312998_121313100_121313773
ENSMUSG00000030108.15_121279762_121314415_1	chr6	+	1470	12	NNC	ENSMUSG00000030108.15	novel	1580	12	NA	NA	108	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	839	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTATAGAGGCAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	121279761	121314415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_121279863_121301225_121301309_121301982_121302116_121303070_121303206_121309321_121309426_121310277_121310403_121311405_121311519_121311797_121311936_121312578_121312682_121312998_121313100_121313773_121313945_121314252
ENSMUSG00000030108.15_121279762_121314415_2	chr6	+	1472	12	FSM	ENSMUSG00000030108.15	ENST00000445055.6	1580	12	108	0	108	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTATAGAGGCAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	121279761	121314415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_121279863_121301223_121301309_121301982_121302116_121303070_121303206_121309321_121309426_121310277_121310403_121311405_121311519_121311797_121311936_121312578_121312682_121312998_121313100_121313773_121313945_121314252
ENSMUSG00000030108.15_121279762_121314415_3	chr6	+	1470	12	NNC	ENSMUSG00000030108.15	novel	1580	12	NA	NA	108	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTATAGAGGCAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	121279761	121314415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_121279863_121301223_121301309_121301982_121302116_121303072_121303206_121309321_121309426_121310277_121310403_121311405_121311519_121311797_121311936_121312578_121312682_121312998_121313100_121313773_121313945_121314252
ENSMUSG00000030108.15_121279762_121314415_4	chr6	+	1469	12	NNC	ENSMUSG00000030108.15	novel	1580	12	NA	NA	108	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTATAGAGGCAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	121279761	121314415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_121279863_121301223_121301309_121301982_121302116_121303070_121303206_121309321_121309426_121310277_121310403_121311405_121311519_121311797_121311936_121312578_121312682_121313001_121313100_121313773_121313945_121314252
ENSMUSG00000030108.15_121279762_121314415_5	chr6	+	1470	12	NNC	ENSMUSG00000030108.15	novel	1580	12	NA	NA	108	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	999	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTATAGAGGCAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	121279761	121314415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_121279863_121301223_121301309_121301982_121302116_121303070_121303206_121309321_121309426_121310277_121310403_121311405_121311519_121311797_121311936_121312578_121312682_121312998_121313100_121313773_121313945_121314254
ENSMUSG00000030108.15_121279762_121314415_6	chr6	+	1465	12	NNC	ENSMUSG00000030108.15	novel	1580	12	NA	NA	108	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTATAGAGGCAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	121279761	121314415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_121279863_121301223_121301309_121301982_121302116_121303070_121303206_121309321_121309426_121310277_121310403_121311405_121311519_121311797_121311936_121312578_121312682_121312998_121313093_121313773_121313945_121314252
ENSMUSG00000030108.15_121279762_121314415_7	chr6	+	1470	12	NNC	ENSMUSG00000030108.15	novel	1580	12	NA	NA	108	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTATAGAGGCAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	121279761	121314415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_121279863_121301223_121301309_121301982_121302116_121303070_121303206_121309321_121309426_121310279_121310403_121311405_121311519_121311797_121311936_121312578_121312682_121312998_121313100_121313773_121313945_121314252
ENSMUSG00000030110.14_118131527_118155633_1	chr6	-	2857	14	ISM	ENSMUSG00000030110.14	ENST00000340058.6	4019	19	18563	-1	18461	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	829	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGCTTCCTAATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	118155633	118131526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118132397_118140148_118140249_118141683_118141822_118142870_118142942_118144856_118144980_118145082_118145298_118146082_118146191_118146793_118146942_118150375_118150630_118151197_118151318_118151967_118152079_118152683_118152792_118153114_118153398_118155425
ENSMUSG00000030110.14_118131654_118156325_1	chr6	-	2818	15	ISM	ENSMUSG00000030110.14	ENST00000340058.6	4019	19	17871	126	17769	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	879	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGCTAAATACTGAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	118156325	118131653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118132397_118140148_118140249_118141683_118141822_118142870_118142942_118144856_118144980_118145082_118145298_118146082_118146191_118146793_118146942_118150375_118150630_118151197_118151318_118151967_118152079_118152683_118152792_118153114_118153398_118155425_118155629_118156232
ENSMUSG00000030110.14_118131829_118157244_1	chr6	-	2812	16	ISM	ENSMUSG00000030110.14	ENST00000340058.6	4019	19	16952	301	16850	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCTGGTGTGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	118157244	118131828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118132397_118140148_118140249_118141683_118141822_118142870_118142942_118144856_118144980_118145082_118145298_118146082_118146191_118146793_118146942_118150375_118150630_118151197_118151318_118151967_118152079_118152683_118152792_118153114_118153398_118155425_118155629_118156232_118156429_118157178
ENSMUSG00000030110.14_118131870_118157307_1	chr6	-	2834	16	ISM	ENSMUSG00000030110.14	ENST00000340058.6	4019	19	16889	342	16787	-342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATGCTATCGTTGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	118157307	118131869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118132397_118140148_118140249_118141683_118141822_118142870_118142942_118144856_118144980_118145082_118145298_118146082_118146191_118146793_118146942_118150375_118150630_118151197_118151318_118151967_118152079_118152683_118152792_118153114_118153398_118155425_118155629_118156232_118156429_118157178
ENSMUSG00000030110.14_118131980_118157376_1	chr6	-	2793	16	ISM	ENSMUSG00000030110.14	ENST00000340058.6	4019	19	16820	452	16718	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTCTCAGGGCCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	118157376	118131979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118132397_118140148_118140249_118141683_118141822_118142870_118142942_118144856_118144980_118145082_118145298_118146082_118146191_118146793_118146942_118150375_118150630_118151197_118151318_118151967_118152079_118152683_118152792_118153114_118153398_118155425_118155629_118156232_118156429_118157178
ENSMUSG00000030110.14_118132185_118158967_1	chr6	-	2817	17	ISM	ENSMUSG00000030110.14	ENST00000340058.6	4019	19	15229	657	15127	-657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAACGCTTTTTAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	118158967	118132184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118132397_118140148_118140249_118141683_118141822_118142870_118142942_118144856_118144980_118145082_118145298_118146082_118146191_118146793_118146942_118150375_118150630_118151197_118151318_118151967_118152079_118152683_118152792_118153114_118153398_118155425_118155629_118156232_118156429_118157178_118157424_118158785
ENSMUSG00000030110.14_118132355_118161181_1	chr6	-	2797	18	ISM	ENSMUSG00000030110.14	ENST00000340058.6	4019	19	13015	827	12913	-827	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATGACGATGGGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	118161181	118132354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118132397_118140148_118140249_118141683_118141822_118142870_118142942_118144856_118144980_118145082_118145298_118146082_118146191_118146793_118146942_118150375_118150630_118151197_118151318_118151967_118152079_118152683_118152792_118153114_118153398_118155425_118155629_118156232_118156429_118157178_118157424_118158785_118159074_118161137
ENSMUSG00000030110.14_118140148_118161295_1	chr6	-	2870	17	ISM	ENSMUSG00000030110.14	ENST00000340058.6	4019	19	12901	8620	12799	-8620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTACCACAGTCACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	118161295	118140147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118140249_118141683_118141822_118142870_118142942_118144856_118144980_118145082_118145298_118146082_118146191_118146793_118146942_118150375_118150630_118151197_118151318_118151967_118152079_118152683_118152792_118153114_118153398_118155425_118155629_118156232_118156429_118157178_118157424_118158785_118159074_118161137
ENSMUSG00000030110.14_118141682_118161403_1	chr6	-	2879	16	ISM	ENSMUSG00000030110.14	ENST00000340058.6	4019	19	12793	10154	12691	-10154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGGCTTTTTCTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	118161403	118141681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118141822_118142870_118142942_118144856_118144980_118145082_118145298_118146082_118146191_118146793_118146942_118150375_118150630_118151197_118151318_118151967_118152079_118152683_118152792_118153114_118153398_118155425_118155629_118156232_118156429_118157178_118157424_118158785_118159074_118161137
ENSMUSG00000030110.14_118141800_118174094_1	chr6	-	2832	17	ISM	ENSMUSG00000030110.14	ENST00000340058.6	4019	19	102	10272	0	-10272	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGATTGTGACCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	118174094	118141799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118141822_118142870_118142942_118144856_118144980_118145082_118145298_118146082_118146191_118146793_118146942_118150375_118150630_118151197_118151318_118151967_118152079_118152683_118152792_118153114_118153398_118155425_118155629_118156232_118156429_118157178_118157424_118158785_118159074_118161137_118161402_118174021
ENSMUSG00000030120.15_124908395_124911610_1	chr6	+	641	7	ISM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	0	1498	0	-1497	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCACATTCGGGATAGGG	NA	NA	NA	NA	NA	NA	NA	NA	124908394	124911610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548
ENSMUSG00000030120.15_124908439_124911675_1	chr6	+	662	7	ISM	ENSMUSG00000030120.15	ENSMUST00000032214.14	1451	9	0	1432	0	-1432	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCGGCAGGACTACATC	NA	NA	NA	NA	NA	NA	NA	NA	124908438	124911675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548
ENSMUSG00000030120.15_124908439_124911708_1	chr6	+	695	7	ISM	ENSMUSG00000030120.15	ENSMUST00000032214.14	1451	9	0	1399	0	-1399	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGAGCCTGTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124908438	124911708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548
ENSMUSG00000030120.15_124908439_124912796_1	chr6	+	1140	9	FSM	ENSMUSG00000030120.15	ENSMUST00000032214.14	1451	9	0	311	0	-311	multi-exon	FALSE	canonical	NA	NA	NA	NA	2504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCCATCTCCAAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	124908438	124912796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912564
ENSMUSG00000030120.15_124909061_124912256_1	chr6	+	646	7	ISM	ENSMUSG00000030120.15	ENSMUST00000032214.14	1451	9	622	851	622	-851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTGGAATTTCGACGGC	NA	NA	NA	NA	NA	NA	NA	NA	124909060	124912256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195
ENSMUSG00000030120.15_124909464_124912408_1	chr6	+	629	6	ISM	ENSMUSG00000030120.15	ENSMUST00000032214.14	1451	9	1025	699	1025	-699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGCCTGAGAGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	124909463	124912408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195
ENSMUSG00000030120.15_124909464_124913108_1	chr6	+	1173	7	ISM	ENSMUSG00000030120.15	ENSMUST00000032214.14	1451	9	1025	-1	1025	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATTCTGGCTGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	124909463	124913108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912564
ENSMUSG00000030120.15_124910916_124912727_1	chr6	+	699	5	ISM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	2521	381	2477	-380	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTCCATCTTCACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	124910915	124912727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912585
ENSMUSG00000030120.15_124911591_124912866_1	chr6	+	612	3	ISM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	3196	242	3152	-241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTTTAGGGATCTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	124911590	124912866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124911709_124912195_124912409_124912585
ENSMUSG00000030120.15_124912196_124912979_1	chr6	+	607	2	ISM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	3801	129	3757	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTCTTTGTCCCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	124912195	124912979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124912409_124912585
ENSMUSG00000030120.15_124912262_124913108_1	chr6	+	670	2	ISM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	3867	0	3823	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATTCTGGCTGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	124912261	124913108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124912409_124912585
ENSMUSG00000030120.15_124912262_124913108_2	chr6	+	664	2	NNC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	3823	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATTCTGGCTGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	124912261	124913108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_124912409_124912591
ENSMUSG00000030122.13_124890644_124894727_1	chr6	-	960	5	NNC	ENSMUSG00000030122.13	novel	1149	5	NA	NA	182	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTCCTGCTTTCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	124894727	124890643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_124891189_124891370_124891430_124891597_124891677_124891880_124891953_124894522
ENSMUSG00000030122.13_124890644_124894727_2	chr6	-	962	5	NNC	ENSMUSG00000030122.13	novel	1149	5	NA	NA	182	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTCCTGCTTTCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	124894727	124890643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_124891196_124891370_124891425_124891597_124891677_124891880_124891953_124894522
ENSMUSG00000030122.13_124890644_124894727_3	chr6	-	961	5	NNC	ENSMUSG00000030122.13	novel	1149	5	NA	NA	182	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTCCTGCTTTCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	124894727	124890643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_124891196_124891370_124891430_124891597_124891671_124891880_124891953_124894522
ENSMUSG00000030122.13_124890644_124894727_4	chr6	-	967	5	FSM	ENSMUSG00000030122.13	ENSMUST00000032216.7	1149	5	182	0	182	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTCCTGCTTTCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	124894727	124890643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124894522
ENSMUSG00000030127.16_124935779_124938273_1	chr6	-	1081	3	ISM	ENSMUSG00000030127.16	ENST00000538410.5	1553	7	4163	-48	4138	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124938273	124935778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124936601_124937053_124937160_124938120
ENSMUSG00000030127.16_124935779_124942411_1	chr6	-	1811	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124942411	124935778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939404_124939584_124939661_124941686_124941892_124942247
ENSMUSG00000030127.16_124935779_124942411_2	chr6	-	1812	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2044	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124942411	124935778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_124936601_124936761_124936914_124937058_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942247
ENSMUSG00000030127.16_124935779_124942411_3	chr6	-	1811	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124942411	124935778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939326_124939410_124939584_124939661_124941686_124941892_124942247
ENSMUSG00000030127.16_124935779_124942411_4	chr6	-	1811	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124942411	124935778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941886_124942247
ENSMUSG00000030127.16_124936197_124942380_1	chr6	-	1279	8	FSM	ENSMUSG00000030127.16	ENST00000543155.6	1784	8	89	416	31	-353	multi-exon	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTAGTGGGCTGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	124942380	124936196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942336
ENSMUSG00000030127.16_124936354_124942416_1	chr6	-	1158	8	FSM	ENSMUSG00000030127.16	ENST00000543155.6	1784	8	53	573	-5	-510	multi-exon	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCTTCCCCAGCACGCT	NA	NA	NA	NA	NA	NA	NA	NA	124942416	124936353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942336
ENSMUSG00000030127.16_124936428_124942475_1	chr6	-	1143	8	FSM	ENSMUSG00000030127.16	ENST00000543155.6	1784	8	-6	647	-6	-584	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCATAAGCCACACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	124942475	124936427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942336
ENSMUSG00000030127.16_124937088_124941754_1	chr6	-	432	4	ISM	ENSMUSG00000030127.16	ENST00000626119.2	1715	7	750	1307	657	-1244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGGCCTGAAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	124941754	124937087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124937160_124938120_124938324_124939320_124939410_124941686
ENSMUSG00000030127.16_124938250_124942423_1	chr6	-	427	4	ISM	ENSMUSG00000030127.16	ENST00000626119.2	1715	7	81	2469	-12	-2406	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGTATGCTGATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	124942423	124938249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124938324_124939320_124939410_124941686_124941892_124942364
ENSMUSG00000030127.16_124938305_124942486_1	chr6	-	435	4	ISM	ENSMUSG00000030127.16	ENST00000626119.2	1715	7	18	2524	15	-2461	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGAGGCCCTTGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	124942486	124938304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124938324_124939320_124939410_124941686_124941892_124942364
ENSMUSG00000030138.9_118365752_118369848_1	chr6	-	777	6	ISM	ENSMUSG00000030138.9	ENST00000556075.2	1171	8	3950	35	3392	-35	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGTTAAAGGCAAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	118369848	118365751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118365893_118366199_118366348_118368078_118368242_118369278_118369338_118369504_118369686_118369763
ENSMUSG00000030138.9_118365797_118368198_1	chr6	-	176	2	ISM	ENSMUSG00000030138.9	ENST00000651585.1	1059	6	5042	258	5042	-80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCAGGGATGCGGACAACA	NA	NA	NA	NA	NA	NA	NA	NA	118368198	118365796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118365893_118368118
ENSMUSG00000030138.9_118366250_118373203_1	chr6	-	806	6	ISM	ENSMUSG00000030138.9	ENST00000556075.2	1171	8	595	533	37	-533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGAAGGAGCCTTCCGCG	NA	NA	NA	NA	NA	NA	NA	NA	118373203	118366249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118366348_118368078_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087
ENSMUSG00000030138.9_118368107_118373762_1	chr6	-	783	6	ISM	ENSMUSG00000030138.9	ENST00000556075.2	1171	8	36	2390	36	-2390	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATTCATGTTACAAATG	NA	NA	NA	NA	NA	NA	NA	NA	118373762	118368106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723
ENSMUSG00000030138.9_118382239_118390793_1	chr6	-	754	6	ISM	ENSMUSG00000030138.9	ENST00000374336.5	1127	8	3748	13	3676	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTTGGAGATACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	118390793	118382238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118382302_118384971_118385102_118388442_118388637_118388915_118389038_118390039_118390183_118390691
ENSMUSG00000030138.9_118388525_118394449_1	chr6	-	747	6	ISM	ENSMUSG00000030138.9	ENST00000374336.5	1127	8	92	6299	20	386	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTGGGGTTGGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	118394449	118388524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348
ENSMUSG00000030138.9_118388911_118394469_1	chr6	-	471	4	FSM	ENSMUSG00000030138.9	ENST00000444180.3	471	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCTCTAAAGCACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	118394469	118388910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_118389038_118390039_118390183_118393423_118393504_118394348
ENSMUSG00000030138.9_118388911_118394469_2	chr6	-	466	4	NNC	ENSMUSG00000030138.9	novel	471	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1924	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCTCTAAAGCACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	118394469	118388910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_118389038_118390039_118390183_118393423_118393504_118394353
ENSMUSG00000030161.9_129510163_129519309_1	chr6	+	1772	4	NNC	ENSMUSG00000030161.9	novel	1820	4	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1846	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGCCTCTTTCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	129510162	129519309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_129510500_129514453_129514533_129515540_129515652_129518064
ENSMUSG00000030161.9_129510163_129519309_2	chr6	+	1773	4	NNC	ENSMUSG00000030161.9	novel	1820	4	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1846	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGCCTCTTTCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	129510162	129519309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_129510500_129514453_129514533_129515532_129515645_129518064
ENSMUSG00000030161.9_129510163_129519309_3	chr6	+	1774	4	NNC	ENSMUSG00000030161.9	novel	1820	4	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1846	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGCCTCTTTCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	129510162	129519309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_129510494_129514453_129514533_129515532_129515652_129518064
ENSMUSG00000030166.15_119888025_119892296_1	chr6	+	444	5	ISM	ENSMUSG00000030166.15	ENSMUST00000032269.12	1617	12	8288	7488	-1939	-694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGCGAGCACTCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	119888024	119892296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_119888103_119889962_119890065_119890859_119890954_119891130_119891199_119892194
ENSMUSG00000030166.15_119890002_119892990_1	chr6	+	517	5	NNC	ENSMUSG00000030166.15	novel	563	5	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCACGACAGGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	119890001	119892990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_119890057_119890859_119890954_119891130_119891199_119892194_119892314_119892809
ENSMUSG00000030166.15_119890002_119892990_2	chr6	+	525	5	FSM	ENSMUSG00000030166.15	ENST00000545564.5	563	5	38	0	38	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCACGACAGGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	119890001	119892990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_119890065_119890859_119890954_119891130_119891199_119892194_119892314_119892809
ENSMUSG00000030166.15_119897091_119899589_1	chr6	+	440	3	ISM	ENSMUSG00000030166.15	ENSMUST00000162461.7	1693	12	17427	195	7127	-195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACTATAGAGGAAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	119897090	119899589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_119897152_119897767_119897990_119899432
ENSMUSG00000030168.14_119330111_119347215_1	chr6	-	3745	7	ISM	ENSMUSG00000030168.14	ENSMUST00000169744.8	3489	8	18432	-615	18432	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTGTGTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	119347215	119330110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110
ENSMUSG00000030168.14_119330111_119347369_1	chr6	-	3899	7	ISM	ENSMUSG00000030168.14	ENSMUST00000169744.8	3489	8	18278	-615	18278	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTGTGTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	119347369	119330110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110
ENSMUSG00000030168.14_119330321_119394481_1	chr6	-	3790	8	FSM	ENSMUSG00000030168.14	ENSMUST00000032272.13	4184	8	184	210	184	-210	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCACTCTCTCATCATT	NA	NA	NA	NA	NA	NA	NA	NA	119394481	119330320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119394380
ENSMUSG00000030168.14_119330381_119394544_1	chr6	-	3793	8	FSM	ENSMUSG00000030168.14	ENSMUST00000032272.13	4184	8	121	270	121	-270	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCTGCGCACACGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	119394544	119330380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119394380
ENSMUSG00000030168.14_119330441_119394651_1	chr6	-	3840	8	FSM	ENSMUSG00000030168.14	ENSMUST00000032272.13	4184	8	14	330	14	285	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCGGGAACTTTCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	119394651	119330440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119394380
ENSMUSG00000030177.15_120302106_120306132_1	chr6	-	427	2	ISM	ENSMUSG00000030177.15	ENSMUST00000112703.8	1887	12	28301	110	28258	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTGATTCATGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	120306132	120302105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120302455_120306054
ENSMUSG00000030177.15_120302388_120308854_1	chr6	-	428	4	ISM	ENSMUSG00000030177.15	ENSMUST00000112703.8	1887	12	25579	392	25536	-392	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGCTCATAAGATACAG	NA	NA	NA	NA	NA	NA	NA	NA	120308854	120302387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772
ENSMUSG00000030203.18_134694139_134738390_1	chr6	-	2875	5	NNC	ENSMUSG00000030203.18	novel	2884	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2089	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCCATGTAACCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	134738390	134694138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_134696015_134697456_134697575_134702798_134702959_134735581_134735721_134737808
ENSMUSG00000030203.18_134694139_134738390_2	chr6	-	2881	5	FSM	ENSMUSG00000030203.18	ENST00000228862.3	2884	5	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCCATGTAACCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	134738390	134694138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_134696015_134697456_134697581_134702798_134702959_134735581_134735721_134737808
ENSMUSG00000030204.11_134988616_134993616_1	chr6	+	622	6	ISM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	41	7123	41	-7123	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGTTTGCTTGGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	134988615	134993616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544
ENSMUSG00000030204.11_134992314_134995160_1	chr6	+	560	6	ISM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	3739	5579	3739	-5579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGTTCTTTACAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	134992313	134995160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013
ENSMUSG00000030204.11_134992538_134995964_1	chr6	+	556	6	ISM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	3963	4775	3963	-4775	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGCTAAGGCGAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	134992537	134995964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936
ENSMUSG00000030204.11_134992785_134996074_1	chr6	+	593	5	ISM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	4210	4665	4210	-4665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCTGCTGTTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	134992784	134996074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936
ENSMUSG00000030204.11_134993591_134998518_1	chr6	+	606	6	ISM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	5016	2221	5016	-2221	internal_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCAGAGGTTTGCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	134993590	134998518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411
ENSMUSG00000030204.11_134994153_135000260_1	chr6	+	553	6	ISM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	5578	479	5578	-479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGAAACGGAAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	134994152	135000260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
ENSMUSG00000030204.11_134995053_135000349_1	chr6	+	555	5	ISM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	6478	390	6478	-390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGAAGCGGAAAGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	134995052	135000349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
ENSMUSG00000030204.11_134995109_135000399_1	chr6	+	549	5	ISM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	6534	340	6534	-340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGCCAGCTGTGAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	134995108	135000399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
ENSMUSG00000030204.11_134995963_135000536_1	chr6	+	608	4	ISM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	7388	203	7388	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTGACACAAGTGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	134995962	135000536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_134996075_134997578_134997650_134998411_134998542_135000241
ENSMUSG00000030206.14_135214327_135221321_1	chr6	-	968	5	NNC	ENSMUSG00000030206.14	novel	1087	6	NA	NA	3582	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCTCCTGAGCCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	135221321	135214326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_135214744_135217070_135217183_135218242_135218396_135219171_135219215_135221078
ENSMUSG00000030206.14_135214327_135224854_1	chr6	-	1072	6	FSM	ENSMUSG00000030206.14	ENST00000337630.10	1160	6	49	39	49	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCTCCTGAGCCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	135224854	135214326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_135214744_135217070_135217183_135218242_135218396_135219171_135219220_135221078_135221398_135224831
ENSMUSG00000030206.14_135214334_135224859_1	chr6	-	1065	6	NNC	ENSMUSG00000030206.14	novel	1160	6	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAACAAGTCTCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	135224859	135214333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_135214744_135217070_135217183_135218247_135218396_135219171_135219220_135221078_135221398_135224831
ENSMUSG00000030206.14_135214334_135224963_1	chr6	-	1174	6	FSM	ENSMUSG00000030206.14	ENST00000337630.10	1160	6	-60	46	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAACAAGTCTCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	135224963	135214333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_135214744_135217070_135217183_135218242_135218396_135219171_135219220_135221078_135221398_135224831
ENSMUSG00000030208.16_135339543_135359187_1	chr6	+	1927	6	FSM	ENSMUSG00000030208.16	ENSMUST00000205156.3	2911	6	0	984	0	859	multi-exon	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGTGGTCTCCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	135339542	135359187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_135339706_135339901_135340101_135354175_135354287_135356898_135356996_135357098_135357240_135357971
ENSMUSG00000030208.16_135339929_135359357_1	chr6	+	1907	5	FSM	ENSMUSG00000030208.16	ENSMUST00000032330.16	2721	5	0	814	0	-814	multi-exon	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGAAGAGAATGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	135339928	135359357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_135340101_135354175_135354287_135356898_135356996_135357098_135357240_135357971
ENSMUSG00000030208.16_135340006_135356967_1	chr6	+	164	2	ISM	ENSMUSG00000030208.16	ENST00000544053.5	691	4	54	1361	54	-1284	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGCTCCCTGTCCTACGG	NA	NA	NA	NA	NA	NA	NA	NA	135340005	135356967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_135340101_135356898
ENSMUSG00000030208.16_135340006_135359411_1	chr6	+	1884	5	FSM	ENSMUSG00000030208.16	ENSMUST00000032330.16	2721	5	77	760	54	-760	multi-exon	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCCTGGTGATGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	135340005	135359411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_135340101_135354175_135354287_135356898_135356996_135357098_135357240_135357971
ENSMUSG00000030208.16_135340066_135357135_1	chr6	+	169	3	ISM	ENSMUSG00000030208.16	ENST00000544053.5	691	4	114	1193	114	-1116	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATCTTCTCCATCATCT	NA	NA	NA	NA	NA	NA	NA	NA	135340065	135357135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_135340101_135356898_135356996_135357098
ENSMUSG00000030208.16_135356950_135357999_1	chr6	+	162	3	ISM	ENSMUSG00000030208.16	ENST00000544053.5	691	4	16998	329	-147	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACACTCATCATTACGCCC	NA	NA	NA	NA	NA	NA	NA	NA	135356949	135357999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_135356996_135357098_135357170_135357954
ENSMUSG00000030208.16_135357136_135359707_1	chr6	+	1840	2	ISM	ENSMUSG00000030208.16	ENSMUST00000111907.2	2763	5	12645	464	39	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATAGTTGCTGGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	135357135	135359707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_135357240_135357971
ENSMUSG00000030208.16_135357168_135358251_1	chr6	+	297	2	FSM	ENSMUSG00000030208.16	ENST00000396301.7	368	2	71	0	71	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGAGAGGGAAGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	135357167	135358251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_135357261_135358047
ENSMUSG00000030216.13_136798314_136798662_1	chr6	-	197	2	ISM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	6569	7662	6569	-7662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCAGAAAACCGCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	136798662	136798313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_136798375_136798526
ENSMUSG00000030218.3_136850165_136852779_1	chr6	-	221	3	ISM	ENSMUSG00000030218.3	ENSMUST00000032342.3	617	4	42	732	42	-732	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGAACTCGACGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	136852779	136850164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_136850241_136851264_136851298_136852667
ENSMUSG00000030218.3_136850165_136852779_2	chr6	-	210	2	NNC	ENSMUSG00000030218.3	novel	617	4	NA	NA	42	-732	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGAACTCGACGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	136852779	136850164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_136850241_136852645
ENSMUSG00000030220.14_136900653_136910683_2	chr6	-	999	5	ISM	ENSMUSG00000030220.14	ENSMUST00000111892.8	1153	6	7818	0	7818	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGAGTTGTCTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	136910683	136900652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_136901325_136903669_136903734_136906609_136906687_136909257_136909342_136910581
ENSMUSG00000030220.14_136900653_136910683_3	chr6	-	994	5	NNC	ENSMUSG00000030220.14	novel	1153	6	NA	NA	7818	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGAGTTGTCTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	136910683	136900652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_136901325_136903669_136903725_136906605_136906687_136909257_136909342_136910581
ENSMUSG00000030220.14_136900830_136918754_1	chr6	-	1016	6	FSM	ENSMUSG00000030220.14	ENSMUST00000032344.12	1193	6	0	177	0	169	multi-exon	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGGGTTCTTCCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	136918754	136900829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_136901325_136903669_136903734_136906609_136906687_136909257_136909342_136910581_136910772_136918648
ENSMUSG00000030222.14_137032941_137146683_1	chr6	-	1103	5	FSM	ENSMUSG00000030222.14	ENSMUST00000117919.8	2262	5	47	1112	0	156	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTCCCTGCTTGCCGTA	NA	NA	NA	NA	NA	NA	NA	NA	137146683	137032940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_137033539_137034810_137034885_137043996_137044054_137141932_137142101_137146477
ENSMUSG00000030224.11_137712076_137728584_1	chr6	+	2304	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	0	346	0	-346	multi-exon	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTACTTATTTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	137712075	137728584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUSG00000030224.11_137712076_137728620_1	chr6	+	2340	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	0	310	0	-310	multi-exon	FALSE	canonical	NA	NA	NA	NA	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTAATTTGGAAATACAGA	NA	NA	NA	NA	NA	NA	NA	NA	137712075	137728620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUSG00000030224.11_137712076_137728621_1	chr6	+	2336	10	NNC	ENSMUSG00000030224.11	novel	2650	10	NA	NA	0	-309	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAATTTGGAAATACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	137712075	137728621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_137712465_137713327_137713464_137716360_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUSG00000030224.11_137712076_137728628_1	chr6	+	2348	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	0	302	0	-302	multi-exon	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAATACAGATGAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	137712075	137728628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUSG00000030224.11_137712176_137728639_1	chr6	+	2259	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	100	291	-83	-291	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACAGCTTGTATTAATT	NA	NA	NA	NA	NA	NA	NA	NA	137712175	137728639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUSG00000030224.11_137712208_137728675_1	chr6	+	2258	10	NNC	ENSMUSG00000030224.11	novel	2650	10	NA	NA	-51	-255	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTGAGTGGCCTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	137712207	137728675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_137712465_137713327_137713464_137716360_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUSG00000030224.11_137712213_137728690_1	chr6	+	2273	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	137	240	-46	-240	multi-exon	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTACTTTGATCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	137712212	137728690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUSG00000030224.11_137712214_137728673_1	chr6	+	2255	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	138	257	-45	-257	multi-exon	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTCTGAGTGGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	137712213	137728673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUSG00000030224.11_137712242_137728725_1	chr6	+	2279	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	166	205	-17	-205	multi-exon	FALSE	canonical	NA	NA	NA	NA	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTAGAAGTTGGCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	137712241	137728725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUSG00000030224.11_137712276_137728761_1	chr6	+	2281	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	200	169	17	-169	multi-exon	FALSE	canonical	NA	NA	NA	NA	2088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGCCAGGGAAGCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	137712275	137728761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUSG00000030224.11_137712310_137727674_1	chr6	+	1203	10	FSM	ENSMUSG00000030224.11	ENST00000025399.10	1196	10	51	-58	51	58	multi-exon	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGAGTTACTGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	137712309	137727674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_137712508_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUSG00000030224.11_137712310_137727674_2	chr6	+	1201	10	NNC	ENSMUSG00000030224.11	novel	1196	10	NA	NA	51	58	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGAGTTACTGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	137712309	137727674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_137712508_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726363_137726428_137727548
ENSMUSG00000030224.11_137712337_137728817_1	chr6	+	2276	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	261	113	78	-113	multi-exon	FALSE	canonical	NA	NA	NA	NA	2149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCATGTTTAACATGCT	NA	NA	NA	NA	NA	NA	NA	NA	137712336	137728817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUSG00000030224.11_137712394_137728930_1	chr6	+	2332	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	318	0	135	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCTTGGATTCCTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	137712393	137728930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUSG00000030225.12_137755121_137814434_1	chr6	+	1191	8	ISM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	23565	458	23547	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATGTTTCTAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	137755120	137814434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ENSMUSG00000030225.12_137757821_137814638_1	chr6	+	1055	6	ISM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	26265	254	26247	183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGTGTCCCCTACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	137757820	137814638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ENSMUSG00000030225.12_137773832_137814892_1	chr6	+	1091	4	ISM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	42276	0	42258	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTGTTTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	137773831	137814892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_137773881_137807190_137807304_137813731_137813882_137814113
ENSMUSG00000030226.13_138341960_138404160_1	chr6	-	1597	5	FSM	ENSMUSG00000030226.13	ENST00000540848.5	1527	5	-67	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCGTGGTTAATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	138404160	138341959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_138343046_138354197_138354324_138393412_138393627_138399438_138399505_138404055
ENSMUSG00000030228.20_139606772_139693914_1	chr6	+	1260	11	ISM	ENSMUSG00000030228.20	ENST00000675017.1	3763	29	40	219842	40	80842	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACATCGCCAAACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	139606771	139693914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139606874_139610674_139610790_139626126_139626230_139634158_139634230_139647720_139647900_139661586_139661621_139665714_139665911_139676087_139676211_139682619_139682756_139689035_139689147_139693824
ENSMUSG00000030228.20_139610674_139700479_1	chr6	+	1237	11	ISM	ENSMUSG00000030228.20	ENST00000675017.1	3763	29	3942	213277	3942	87407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCTCTACTGCAACAATGA	NA	NA	NA	NA	NA	NA	NA	NA	139610673	139700479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139610790_139626126_139626230_139634158_139634230_139647720_139647900_139661586_139661621_139665714_139665911_139676087_139676211_139682619_139682756_139689035_139689147_139693824_139693956_139700442
ENSMUSG00000030228.20_139610714_139700549_1	chr6	+	1267	11	ISM	ENSMUSG00000030228.20	ENST00000675017.1	3763	29	3982	213207	3982	87477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGTTTCTGAAATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	139610713	139700549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139610790_139626126_139626230_139634158_139634230_139647720_139647900_139661586_139661621_139665714_139665911_139676087_139676211_139682619_139682756_139689035_139689147_139693824_139693956_139700442
ENSMUSG00000030228.20_139610774_139700597_1	chr6	+	1255	11	ISM	ENSMUSG00000030228.20	ENST00000675017.1	3763	29	4042	213159	4042	87525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGGGAAGCTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	139610773	139700597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139610790_139626126_139626230_139634158_139634230_139647720_139647900_139661586_139661621_139665714_139665911_139676087_139676211_139682619_139682756_139689035_139689147_139693824_139693956_139700442
ENSMUSG00000030228.20_139626127_139714510_1	chr6	+	1368	11	ISM	ENSMUSG00000030228.20	ENST00000675017.1	3763	29	19395	199246	19395	101438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGCCGAGGGTCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	139626126	139714510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139626230_139634158_139634230_139647720_139647900_139661586_139661621_139665714_139665911_139676087_139676211_139682619_139682756_139689035_139689147_139693824_139693956_139700442_139700632_139714415
ENSMUSG00000030228.20_139626128_139682722_1	chr6	+	685	6	ISM	ENSMUSG00000030228.20	ENST00000433979.6	3640	28	19396	231034	19396	69650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACCTGCCTTCCACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	139626127	139682722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139626230_139634158_139634230_139647720_139647900_139661586_139661621_139665714_139665911_139682619
ENSMUSG00000030228.20_139647768_139789641_1	chr6	+	1269	11	NIC	ENSMUSG00000030228.20	novel	3763	29	NA	NA	-34853	-124028	combination_of_known_junctions	TRUE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTAAAAGCTGGTATCA	NA	NA	NA	NA	NA	NA	NA	NA	139647767	139789641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_139647900_139661586_139661621_139665714_139665911_139676087_139676211_139682619_139682752_139689031_139689147_139693824_139693956_139700442_139700632_139714415_139714510_139718134_139718230_139789613
ENSMUSG00000030228.20_139647780_139693907_1	chr6	+	680	6	ISM	ENSMUSG00000030228.20	ENST00000433979.6	3640	28	41048	219849	-34841	80835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTTAAAACACATCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	139647779	139693907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139647900_139661586_139661621_139665714_139665911_139682619_139682756_139689035_139689147_139693824
ENSMUSG00000030228.20_139647835_139789681_1	chr6	+	1242	11	NIC	ENSMUSG00000030228.20	novel	3763	29	NA	NA	-34786	-123988	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGTGCAGGAGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	139647834	139789681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_139647900_139661586_139661621_139665714_139665911_139676087_139676211_139682619_139682752_139689031_139689147_139693824_139693956_139700442_139700632_139714415_139714510_139718134_139718230_139789613
ENSMUSG00000030228.20_139647870_139789751_1	chr6	+	1277	11	NIC	ENSMUSG00000030228.20	novel	3763	29	NA	NA	-34751	-123918	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGGAGAAAAAGTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	139647869	139789751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_139647900_139661586_139661621_139665714_139665911_139676087_139676211_139682619_139682752_139689031_139689147_139693824_139693956_139700442_139700632_139714415_139714510_139718134_139718230_139789613
ENSMUSG00000030228.20_139665858_139798549_1	chr6	+	1255	11	NIC	ENSMUSG00000030228.20	novel	3763	29	NA	NA	-16763	-115120	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGATTACTTTCATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	139665857	139798549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_139665911_139676087_139676211_139682619_139682752_139689031_139689147_139693824_139693956_139700442_139700632_139714415_139714510_139718134_139718230_139789613_139789795_139793287_139793396_139798515
ENSMUSG00000030228.20_139676150_139801049_1	chr6	+	1255	11	NIC	ENSMUSG00000030228.20	novel	2712	21	NA	NA	-6471	-112620	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGCTTGGCTGCAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	139676149	139801049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_139676211_139682619_139682752_139689031_139689147_139693824_139693956_139700442_139700632_139714415_139714510_139718134_139718230_139789613_139789795_139793287_139793396_139798515_139798609_139800993
ENSMUSG00000030228.20_139682621_139805163_1	chr6	+	1340	11	ISM	ENSMUSG00000030228.20	ENSMUST00000218528.2	2712	21	0	108506	0	-108506	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAACACCATCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	139682620	139805163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139682752_139689031_139689147_139693824_139693956_139700442_139700632_139714415_139714510_139718134_139718230_139789613_139789795_139793287_139793396_139798515_139798609_139800993_139801124_139805090
ENSMUSG00000030228.20_139682725_139805214_1	chr6	+	1287	11	ISM	ENSMUSG00000030228.20	ENSMUST00000218528.2	2712	21	104	108455	104	-108455	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTATGAGAAGGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	139682724	139805214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139682752_139689031_139689147_139693824_139693956_139700442_139700632_139714415_139714510_139718134_139718230_139789613_139789795_139793287_139793396_139798515_139798609_139800993_139801124_139805090
ENSMUSG00000030228.20_139693822_139806108_1	chr6	+	1331	10	ISM	ENSMUSG00000030228.20	ENSMUST00000218528.2	2712	21	11201	107561	11201	-107561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGTCCACAAACATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	139693821	139806108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139693956_139700442_139700632_139714415_139714510_139718134_139718230_139789613_139789795_139793287_139793396_139798515_139798609_139800993_139801124_139805090_139805228_139805938
ENSMUSG00000030228.20_139700443_139821088_1	chr6	+	1257	10	ISM	ENSMUSG00000030228.20	ENSMUST00000218528.2	2712	21	17822	92581	17822	-92581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACACAGCATTTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	139700442	139821088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139700632_139714415_139714510_139718134_139718230_139789613_139789795_139793287_139793396_139798515_139798609_139800993_139801124_139805090_139805228_139805938_139806109_139821028
ENSMUSG00000030228.20_139700581_139827725_1	chr6	+	1250	11	ISM	ENSMUSG00000030228.20	ENSMUST00000218528.2	2712	21	17960	85944	17960	-85944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAAGACCTGAAGTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	139700580	139827725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139700632_139714415_139714510_139718134_139718230_139789613_139789795_139793287_139793396_139798515_139798609_139800993_139801124_139805090_139805228_139805938_139806109_139821028_139821186_139827691
ENSMUSG00000030228.20_139718168_139841908_1	chr6	+	1265	10	ISM	ENSMUSG00000030228.20	ENSMUST00000218528.2	2712	21	35547	71761	35547	-71761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTGCATCCTGAATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	139718167	139841908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139718230_139789613_139789795_139793287_139793396_139798515_139798609_139800993_139801124_139805090_139805228_139805938_139806109_139821028_139821186_139827691_139827802_139841791
ENSMUSG00000030228.20_139789655_139842480_1	chr6	+	1262	10	ISM	ENSMUSG00000030228.20	ENSMUST00000087657.7	3303	16	281	72530	281	-71189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATAGGAGAAGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	139789654	139842480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139789795_139793287_139793396_139798515_139798609_139800993_139801124_139805090_139805228_139805938_139806109_139821028_139821186_139827691_139827802_139841791_139841982_139842453
ENSMUSG00000030228.20_139789688_139842549_1	chr6	+	1298	10	ISM	ENSMUSG00000030228.20	ENSMUST00000087657.7	3303	16	314	72461	314	-71120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTCTCCTCCTTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	139789687	139842549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139789795_139793287_139793396_139798515_139798609_139800993_139801124_139805090_139805228_139805938_139806109_139821028_139821186_139827691_139827802_139841791_139841982_139842453
ENSMUSG00000030228.20_139793286_139846110_1	chr6	+	1328	10	ISM	ENSMUSG00000030228.20	ENSMUST00000087657.7	3303	16	3912	68900	3912	-67559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTACTGTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	139793285	139846110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139793396_139798515_139798609_139800993_139801124_139805090_139805228_139805938_139806109_139821028_139821186_139827691_139827802_139841791_139841982_139842453_139842576_139846001
ENSMUSG00000030228.20_139798516_139863778_1	chr6	+	1294	10	ISM	ENSMUSG00000030228.20	ENSMUST00000087657.7	3303	16	9142	51232	9142	-49891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGTGAATTCATCACAAT	NA	NA	NA	NA	NA	NA	NA	NA	139798515	139863778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139798609_139800993_139801124_139805090_139805228_139805938_139806109_139821028_139821186_139827691_139827802_139841791_139841982_139842453_139842576_139846001_139846111_139863702
ENSMUSG00000030228.20_139801068_139903467_1	chr6	+	1258	11	ISM	ENSMUSG00000030228.20	ENSMUST00000087657.7	3303	16	11694	11543	11694	-10202	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTTATCTTCTACCACA	NA	NA	NA	NA	NA	NA	NA	NA	139801067	139903467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139801124_139805090_139805228_139805938_139806109_139821028_139821186_139827691_139827802_139841791_139841982_139842453_139842576_139846001_139846111_139863702_139863779_139881707_139881803_139903431
ENSMUSG00000030228.20_139805170_139913557_1	chr6	+	1254	11	ISM	ENSMUSG00000030228.20	ENSMUST00000087657.7	3303	16	15796	1453	15796	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTTATCGTGAAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	139805169	139913557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139805228_139805938_139806109_139821028_139821186_139827691_139827802_139841791_139841982_139842453_139842576_139846001_139846111_139863702_139863779_139881707_139881803_139903431_139903558_139913516
ENSMUSG00000030228.20_139805972_139913669_1	chr6	+	1275	10	ISM	ENSMUSG00000030228.20	ENSMUST00000087657.7	3303	16	16598	1341	16598	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACGCCACGAGCGTATGC	NA	NA	NA	NA	NA	NA	NA	NA	139805971	139913669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139806109_139821028_139821186_139827691_139827802_139841791_139841982_139842453_139842576_139846001_139846111_139863702_139863779_139881707_139881803_139903431_139903558_139913516
ENSMUSG00000030228.20_139806037_139913715_1	chr6	+	1256	10	ISM	ENSMUSG00000030228.20	ENSMUST00000087657.7	3303	16	16663	1295	16663	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTCTACTTGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	139806036	139913715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_139806109_139821028_139821186_139827691_139827802_139841791_139841982_139842453_139842576_139846001_139846111_139863702_139863779_139881707_139881803_139903431_139903558_139913516
ENSMUSG00000030232.19_140587892_140593725_1	chr6	+	414	4	ISM	ENSMUSG00000030232.19	ENST00000673824.1	834	7	8461	2784	8461	-2784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACGACATCAGTTAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	140587891	140593725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_140588085_140589673_140589799_140592535_140592604_140593697
ENSMUSG00000030232.19_140588048_140596514_1	chr6	+	389	5	ISM	ENSMUSG00000030232.19	ENST00000673824.1	834	7	8617	-5	8617	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTCATAAATACATAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	140588047	140596514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_140588085_140589673_140589799_140592535_140592604_140593697_140593824_140596481
ENSMUSG00000030235.18_141470125_141493661_1	chr6	+	1551	9	NIC	ENSMUSG00000030235.18	novel	2642	15	NA	NA	0	-21596	intron_retention	TRUE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCCACCTTTCTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	141470124	141493661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_141470469_141477179_141477333_141478367_141478510_141484905_141485039_141485788_141485910_141487817_141487965_141490458_141490558_141492402_141492649_141493495
ENSMUSG00000030235.18_141470125_141515199_1	chr6	+	2427	16	NIC	ENSMUSG00000030235.18	novel	2471	16	NA	NA	0	-58	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2592	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGATCGTGGATTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	141470124	141515199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_141470276_141470397_141470469_141477179_141477333_141478367_141478510_141484905_141485039_141485788_141485910_141487817_141487965_141490458_141490558_141492402_141492649_141493495_141493661_141500717_141500914_141505466_141505633_141508751_141508937_141510240_141510306_141513179_141513399_141515031
ENSMUSG00000030235.18_141470261_141500913_1	chr6	+	1610	10	NIC	ENSMUSG00000030235.18	novel	2642	15	NA	NA	0	-14344	intron_retention	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTACCTTCATGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	141470260	141500913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_141470469_141477179_141477333_141478367_141478510_141484905_141485039_141485788_141485910_141487817_141487965_141490458_141490558_141492402_141492649_141493495_141493661_141500717
ENSMUSG00000030235.18_141470261_141515261_1	chr6	+	2353	16	NIC	ENSMUSG00000030235.18	novel	2471	16	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2691	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATGGAAACAAACAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	141470260	141515261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_141470276_141470397_141470469_141477179_141477333_141478367_141478510_141484905_141485039_141485788_141485910_141487817_141487965_141490458_141490558_141492402_141492649_141493495_141493661_141500717_141500914_141505466_141505633_141508751_141508937_141510240_141510306_141513179_141513399_141515031
ENSMUSG00000030235.18_141470397_141515261_1	chr6	+	2338	15	NNC	ENSMUSG00000030235.18	novel	2471	16	NA	NA	136	4	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2462	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATGGAAACAAACAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	141470396	141515261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_141470469_141477179_141477333_141478367_141478510_141484905_141485039_141485788_141485910_141487817_141487965_141490458_141490558_141492402_141492649_141493495_141493661_141500717_141500914_141505467_141505633_141508751_141508937_141510240_141510306_141513179_141513399_141515031
ENSMUSG00000030235.18_141478455_141513239_1	chr6	+	1642	12	ISM	ENSMUSG00000030235.18	ENST00000545604.5	2471	16	8312	2018	-6449	-2018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAAGAAATGTGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	141478454	141513239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_141478510_141484905_141485043_141485788_141485910_141487817_141487965_141490458_141490558_141492402_141492649_141493495_141493661_141500717_141500914_141505466_141505633_141508751_141508937_141510240_141510306_141513179
ENSMUSG00000030235.18_141484968_141515078_1	chr6	+	1630	12	ISM	ENSMUSG00000030235.18	ENST00000266509.7	2642	15	14975	179	64	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAAGCATGGCTGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	141484967	141515078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_141485043_141485788_141485910_141487817_141487965_141490458_141490558_141492402_141492649_141493495_141493661_141500717_141500914_141505466_141505633_141508751_141508937_141510240_141510306_141513179_141513298_141515031
ENSMUSG00000030235.18_141485789_141515199_1	chr6	+	1676	11	ISM	ENSMUSG00000030235.18	ENST00000266509.7	2642	15	15796	58	885	-58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGATCGTGGATTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	141485788	141515199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_141485910_141487817_141487965_141490458_141490558_141492402_141492649_141493495_141493661_141500717_141500914_141505466_141505633_141508751_141508937_141510240_141510306_141513179_141513298_141515031
ENSMUSG00000030245.11_142332947_142349584_1	chr6	+	2811	5	NNC	ENSMUSG00000030245.11	novel	2818	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	142332946	142349584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347275
ENSMUSG00000030245.11_142332947_142349584_2	chr6	+	2812	5	NNC	ENSMUSG00000030245.11	novel	2818	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	142332946	142349584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_142333096_142338055_142338148_142339653_142339827_142341913_142341996_142347268
ENSMUSG00000030246.13_142436062_142451178_1	chr6	-	1018	7	ISM	ENSMUSG00000030246.13	ENSMUST00000239397.2	1287	8	2491	84	2491	-84	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATGAGCTCACAGATCA	NA	NA	NA	NA	NA	NA	NA	NA	142451178	142436061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137
ENSMUSG00000030246.13_142436297_142453669_1	chr6	-	968	8	FSM	ENSMUSG00000030246.13	ENSMUST00000239397.2	1287	8	0	319	0	-319	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCCGTGCATCCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	142453669	142436296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
ENSMUSG00000030256.12_145807384_145809895_1	chr6	-	2120	2	ISM	ENSMUSG00000030256.12	ENSMUST00000032386.11	6133	5	1389	3415	1133	1847	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGTTGCTACTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	145809895	145807383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_145809465_145809856
ENSMUSG00000030256.12_145807505_145810321_1	chr6	-	2092	3	ISM	ENSMUSG00000030256.12	ENSMUST00000032386.11	6133	5	963	3536	707	1726	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATATTTTTAGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	145810321	145807504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_145809465_145809856_145809969_145810301
ENSMUSG00000030256.12_145807829_145811028_1	chr6	-	2017	5	FSM	ENSMUSG00000030256.12	ENSMUST00000032386.11	6133	5	256	3860	0	1402	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATTATTTTATCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	145811028	145807828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_145809465_145809856_145809969_145810301_145810410_145810722_145810787_145810931
ENSMUSG00000030256.12_145807927_145811284_1	chr6	-	2175	5	FSM	ENSMUSG00000030256.12	ENSMUST00000032386.11	6133	5	0	3958	0	1304	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTCGCACTTTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	145811284	145807926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_145809465_145809856_145809969_145810301_145810410_145810722_145810787_145810931
ENSMUSG00000030257.17_112718307_112731550_1	chr6	-	339	5	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	75049	5512	75049	-5512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGATGGCCCATTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	112731550	112718306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112718457_112723852_112723931_112726322_112726384_112727341_112727373_112731531
ENSMUSG00000030257.17_112718364_112731596_1	chr6	-	328	5	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	75003	5569	75003	-5569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCCTAAGGAAAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	112731596	112718363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112718457_112723852_112723931_112726322_112726384_112727341_112727373_112731531
ENSMUSG00000030257.17_112723849_112743914_1	chr6	-	391	6	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	62685	11054	62685	-11054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGACTGACTATCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	112743914	112723848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112723931_112726322_112726384_112727341_112727373_112731531_112731635_112736709_112736738_112743828
ENSMUSG00000030257.17_112726359_112745372_1	chr6	-	349	6	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	61227	13564	61227	-13564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGAGAGCTGTATTCGA	NA	NA	NA	NA	NA	NA	NA	NA	112745372	112726358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112726384_112727341_112727373_112731531_112731635_112736709_112736738_112743828_112743914_112745295
ENSMUSG00000030257.17_112745330_112750580_1	chr6	-	373	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	56019	32535	56019	-32535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGCCTCCCACTCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	112750580	112745329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112745483_112748327_112748526_112750558
ENSMUSG00000030257.17_112745398_112750617_1	chr6	-	342	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	55982	32603	55982	-32603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTTTTAATGAATAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	112750617	112745397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112745483_112748327_112748526_112750558
ENSMUSG00000030257.17_112748351_112752545_1	chr6	-	363	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	54054	35556	54054	-35556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAAATGTTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	112752545	112748350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112748526_112750558_112750661_112752459
ENSMUSG00000030257.17_112748406_112752593_1	chr6	-	356	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	54006	35611	54006	-35611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAGACCTACATGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	112752593	112748405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112748526_112750558_112750661_112752459
ENSMUSG00000030257.17_112748444_112752657_1	chr6	-	382	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	53942	35649	53942	-35649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAGCCGATCTACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	112752657	112748443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112748526_112750558_112750661_112752459
ENSMUSG00000030257.17_112752513_112757881_1	chr6	-	346	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	48718	39718	48718	-39718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTTGCCCTCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	112757881	112752512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112752682_112753980_112754110_112757833
ENSMUSG00000030257.17_112752553_112757943_1	chr6	-	368	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	48656	39758	48656	-39758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCGGAGTGACAAGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	112757943	112752552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112752682_112753980_112754110_112757833
ENSMUSG00000030257.17_112754051_112793593_1	chr6	-	350	4	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	13006	41256	13006	-41256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATCTGGCAGCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	112793593	112754050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112754110_112757833_112758020_112772733_112772797_112793551
ENSMUSG00000030257.17_112757885_112806437_1	chr6	-	399	4	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	162	45090	162	-45090	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCCAGCGCCGCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	112806437	112757884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112758020_112772733_112772797_112793551_112793715_112806399
ENSMUSG00000030257.17_112757938_112806492_1	chr6	-	401	4	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	107	45143	107	-45143	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTTTAACAAGTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	112806492	112757937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112758020_112772733_112772797_112793551_112793715_112806399
ENSMUSG00000030257.17_112757997_112806547_1	chr6	-	397	4	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	52	45202	52	-45202	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGCAGAGAGCATCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	112806547	112757996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112758020_112772733_112772797_112793551_112793715_112806399
ENSMUSG00000030264.15_113023186_113044352_1	chr6	+	1563	9	ISM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	0	882	0	-882	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTATACACGAGAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	113023185	113044352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228
ENSMUSG00000030264.15_113023288_113044690_1	chr6	+	1517	10	FSM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	102	544	102	-544	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGGCCTTCATGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	113023287	113044690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ENSMUSG00000030264.15_113024376_113044857_1	chr6	+	1620	9	ISM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	1190	377	1190	-377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGGGAGAAAAATAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	113024375	113044857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ENSMUSG00000030264.15_113026298_113045118_1	chr6	+	1593	8	ISM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	3112	116	3112	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATACAACCTAAACAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	113026297	113045118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ENSMUSG00000030264.15_113032720_113045234_1	chr6	+	1509	7	ISM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	9534	0	9534	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	113032719	113045234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ENSMUSG00000030265.15_145184748_145195896_1	chr6	-	388	3	FSM	ENSMUSG00000030265.15	ENST00000556131.1	554	3	61	105	7	-105	multi-exon	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTGTAATAAGCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	145195896	145184747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_145184904_145192420_145192543_145195786
ENSMUSG00000030265.15_145184748_145195896_2	chr6	-	380	3	NNC	ENSMUSG00000030265.15	novel	554	3	NA	NA	7	-105	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTGTAATAAGCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	145195896	145184747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_145184904_145192420_145192523_145195774
ENSMUSG00000030268.18_144945384_144953372_1	chr6	-	753	3	ISM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	41166	5823	31991	-500	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTCCCTGGGTCCACGC	NA	NA	NA	NA	NA	NA	NA	NA	144953372	144945383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_144946031_144950076_144950152_144953341
ENSMUSG00000030268.18_144945428_144953432_1	chr6	-	769	3	ISM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	41106	5867	31931	-544	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTTTAATCAAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	144953432	144945427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_144946031_144950076_144950152_144953341
ENSMUSG00000030268.18_144945632_144961234_1	chr6	-	761	5	ISM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	33304	6071	24129	-748	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTCTTTTGTTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	144961234	144945631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174
ENSMUSG00000030268.18_144945787_144964980_1	chr6	-	752	6	ISM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	29558	6226	20383	-903	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTCACCCTGTACCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	144964980	144945786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917
ENSMUSG00000030268.18_144945910_144978569_1	chr6	-	791	7	ISM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	15969	6349	6794	-1026	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGCACATTGTAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	144978569	144945909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508
ENSMUSG00000030268.18_144945950_144978594_1	chr6	-	776	7	ISM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	15944	6389	6769	-1066	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGACTCCTGCCCTCGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	144978594	144945949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508
ENSMUSG00000030268.18_144950124_144980377_1	chr6	-	793	7	ISM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	14161	10563	4986	-280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCAAGCTTGCAAGTCGA	NA	NA	NA	NA	NA	NA	NA	NA	144980377	144950123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266
ENSMUSG00000030268.18_144953345_144961317_1	chr6	-	367	3	ISM	ENSMUSG00000030268.18	ENST00000539780.5	854	6	24046	0	24046	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTAAGAGAAGTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	144961317	144953344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_144953483_144955775_144955862_144961174
ENSMUSG00000030268.18_144953456_144985284_1	chr6	-	775	7	ISM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	9254	13895	79	-111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCATGGATGACCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	144985284	144953455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160
ENSMUSG00000030268.18_144961251_144985231_1	chr6	-	422	4	ISM	ENSMUSG00000030268.18	ENST00000539780.5	854	6	132	7906	132	-7906	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTACGGCAAGGACAACCA	NA	NA	NA	NA	NA	NA	NA	NA	144985231	144961250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_144961318_144964917_144965082_144978508_144978629_144985160
ENSMUSG00000030268.18_144961267_145021677_1	chr6	-	782	7	ISM	ENSMUSG00000030268.18	ENSMUST00000048252.11	1642	10	233	11423	233	-7922	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCAGGTCCTGTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	145021677	144961266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ENSMUSG00000030268.18_144964918_145021797_1	chr6	-	851	6	ISM	ENSMUSG00000030268.18	ENSMUST00000048252.11	1642	10	113	15074	113	-11573	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCGGTCCCTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	145021797	144964917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ENSMUSG00000030268.18_144978516_145021910_1	chr6	-	793	5	ISM	ENSMUSG00000030268.18	ENSMUST00000048252.11	1642	10	0	28672	0	-25171	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAGGTACGGCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	145021910	144978515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ENSMUSG00000030269.15_113214804_113258160_1	chr6	+	2327	18	FSM	ENSMUSG00000030269.15	ENST00000353332.9	2346	18	19	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTTCATTAGCATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	113214803	113258160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113257563
ENSMUSG00000030269.15_113215008_113246739_1	chr6	+	516	8	ISM	ENSMUSG00000030269.15	ENST00000420925.5	1410	9	206	11420	204	218	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTTGGAGCACTCACC	NA	NA	NA	NA	NA	NA	NA	NA	113215007	113246739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113215083_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692
ENSMUSG00000030269.15_113215033_113246831_1	chr6	+	583	8	ISM	ENSMUSG00000030269.15	ENST00000420925.5	1410	9	231	11328	229	310	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGGGCCAGACTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	113215032	113246831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113215083_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692
ENSMUSG00000030269.15_113232793_113246521_1	chr6	+	377	5	NNC	ENSMUSG00000030269.15	novel	365	5	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCCTGTCCCTAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	113232792	113246521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_113232900_113233983_113234058_113237548_113237620_113238166_113238235_113246464
ENSMUSG00000030269.15_113232793_113246521_2	chr6	+	380	5	FSM	ENSMUSG00000030269.15	ENST00000584299.1	365	5	-15	0	-15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCCTGTCCCTAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	113232792	113246521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_113232900_113233983_113234058_113237548_113237620_113238166_113238235_113246461
ENSMUSG00000030269.15_113242455_113257590_1	chr6	+	510	8	ISM	ENSMUSG00000030269.15	ENST00000420925.5	1410	9	27653	569	9647	-569	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGCAGGAGGTGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	113242454	113257590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113257563
ENSMUSG00000030269.15_113242966_113257642_1	chr6	+	510	7	ISM	ENSMUSG00000030269.15	ENST00000420925.5	1410	9	28164	517	10158	-517	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTCGAGCAGCAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	113242965	113257642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113257563
ENSMUSG00000030269.15_113242966_113257721_1	chr6	+	589	7	ISM	ENSMUSG00000030269.15	ENST00000420925.5	1410	9	28164	438	10158	-438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCACAAGCACCAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	113242965	113257721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113257563
ENSMUSG00000030269.15_113247570_113258353_1	chr6	+	1039	3	ISM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	32766	0	14762	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTCAGTCCCCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	113247569	113258353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113247663_113254750_113254907_113257563
ENSMUSG00000030271.15_113305325_113317448_1	chr6	+	575	3	FSM	ENSMUSG00000030271.15	ENST00000383826.9	575	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAGTCATGACCACCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	113305324	113317448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_113305574_113306189_113306370_113317302
ENSMUSG00000030271.15_113305325_113317448_2	chr6	+	568	3	NNC	ENSMUSG00000030271.15	novel	575	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAGTCATGACCACCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	113305324	113317448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_113305574_113306196_113306370_113317302
ENSMUSG00000030271.15_113305437_113308859_1	chr6	+	445	3	ISM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	1504	2290	112	-2290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTATGAAGAGGCCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	113305436	113308859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113305574_113306189_113306370_113308731
ENSMUSG00000030271.15_113305506_113317346_1	chr6	+	474	4	FSM	ENSMUSG00000030271.15	ENST00000349503.9	757	4	181	102	181	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCCTCTGCCAGGATC	NA	NA	NA	NA	NA	NA	NA	NA	113305505	113317346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_113305574_113306189_113306370_113308731_113308914_113317302
ENSMUSG00000030271.15_113306274_113317426_1	chr6	+	402	3	ISM	ENSMUSG00000030271.15	ENST00000349503.9	757	4	949	22	949	-22	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCGCCCTCCTCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	113306273	113317426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113306370_113308731_113308914_113317302
ENSMUSG00000030272.16_113311089_113320942_1	chr6	-	1483	12	NNC	ENSMUSG00000030272.16	novel	1496	12	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTCCGTTTGCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	113320942	113311088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_113311364_113311474_113311593_113313134_113313223_113313318_113313398_113314153_113314267_113315071_113315148_113315240_113315368_113316245_113316385_113316467_113316543_113317252_113317385_113318828_113318944_113320796
ENSMUSG00000030272.16_113311089_113320942_2	chr6	-	1481	12	NNC	ENSMUSG00000030272.16	novel	1496	12	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTCCGTTTGCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	113320942	113311088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_113311370_113311474_113311593_113313134_113313223_113313318_113313398_113314153_113314267_113315071_113315148_113315240_113315368_113316245_113316377_113316467_113316543_113317252_113317385_113318828_113318944_113320796
ENSMUSG00000030272.16_113311089_113320942_3	chr6	-	1481	12	NNC	ENSMUSG00000030272.16	novel	1496	12	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTCCGTTTGCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	113320942	113311088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_113311370_113311474_113311593_113313134_113313215_113313318_113313398_113314153_113314267_113315071_113315148_113315240_113315368_113316245_113316385_113316467_113316543_113317252_113317385_113318828_113318944_113320796
ENSMUSG00000030272.16_113311089_113320942_4	chr6	-	1483	12	NNC	ENSMUSG00000030272.16	novel	1496	12	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTCCGTTTGCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	113320942	113311088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_113311370_113311474_113311593_113313134_113313223_113313318_113313392_113314153_113314267_113315071_113315148_113315240_113315368_113316245_113316385_113316467_113316543_113317252_113317385_113318828_113318944_113320796
ENSMUSG00000030272.16_113311089_113320942_5	chr6	-	1482	12	NNC	ENSMUSG00000030272.16	novel	1496	12	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTCCGTTTGCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	113320942	113311088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_113311370_113311474_113311593_113313134_113313223_113313318_113313398_113314153_113314267_113315071_113315148_113315240_113315368_113316245_113316385_113316467_113316536_113317252_113317385_113318828_113318944_113320796
ENSMUSG00000030278.12_113405115_113405490_1	chr6	-	303	2	FSM	ENSMUSG00000030278.12	ENST00000505910.1	304	2	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCACTGCTACAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	113405490	113405114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_113405260_113405332
ENSMUSG00000030279.16_142957663_142974972_1	chr6	-	778	6	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	70540	127	70521	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGGCCCGGCGTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	142974972	142957662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885
ENSMUSG00000030279.16_142957799_142975351_1	chr6	-	695	7	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	70161	263	70142	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCATCTCAGCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	142975351	142957798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298
ENSMUSG00000030279.16_142958927_142975937_1	chr6	-	757	7	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	69575	1391	69556	-1264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCAACAGCCCGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	142975937	142958926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847
ENSMUSG00000030279.16_142959061_142976543_1	chr6	-	663	8	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	68969	1525	68950	-1398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTCTCCACGCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	142976543	142959060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503
ENSMUSG00000030279.16_142963608_142977032_1	chr6	-	771	8	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	68480	6072	68461	-5945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTTACAAAACGGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	142977032	142963607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970
ENSMUSG00000030279.16_142963727_142977306_1	chr6	-	671	9	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	68206	6191	68187	-6064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACAGTTGGGGTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	142977306	142963726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287
ENSMUSG00000030279.16_142965054_142980888_1	chr6	-	784	9	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	64624	7518	64605	-7391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCGGATGTTTCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	142980888	142965053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747
ENSMUSG00000030279.16_142966061_142981995_1	chr6	-	706	9	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	63517	8525	63498	-8398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACAGAGAGGTGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	142981995	142966060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960
ENSMUSG00000030279.16_142975367_142984597_1	chr6	-	690	8	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	60915	17831	60896	-17704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACTTTTGATAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	142984597	142975366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548
ENSMUSG00000030279.16_142977286_142987269_1	chr6	-	751	5	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	58243	19750	58224	-19623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCAGCAAGCTGACTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	142987269	142977285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077
ENSMUSG00000030279.16_142981960_142995965_1	chr6	-	756	5	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	49547	24424	49528	-24297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGACTCGGGCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	142995965	142981959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850
ENSMUSG00000030279.16_142984702_143019434_1	chr6	-	678	7	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	26078	27166	26059	-27039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAATGCCACAGCTATCAG	NA	NA	NA	NA	NA	NA	NA	NA	143019434	142984701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143019388
ENSMUSG00000030279.16_142987176_143024073_1	chr6	-	710	7	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	21439	29640	21420	-29513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGCAGGAAGCAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	143024073	142987175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143019388_143019514_143023988
ENSMUSG00000030279.16_142987176_143024122_1	chr6	-	759	7	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	21390	29640	21371	-29513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGCAGGAAGCAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	143024122	142987175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143019388_143019514_143023988
ENSMUSG00000030279.16_142992838_143025703_1	chr6	-	770	7	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	19809	35302	19790	-35175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCACGGCAGCTGTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	143025703	142992837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143019388_143019514_143023988_143024188_143025594
ENSMUSG00000030279.16_143007479_143027154_1	chr6	-	771	6	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	18358	49943	18339	-49816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTCTTTAAAAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	143027154	143007478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143007588_143012781_143012868_143019388_143019514_143023988_143024188_143025594_143025751_143027058
ENSMUSG00000030279.16_143012829_143028950_1	chr6	-	677	6	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	16562	55293	16543	-55166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGCCCTTTTACGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	143028950	143012828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143012868_143019388_143019514_143023988_143024188_143025594_143025751_143027058_143027155_143028888
ENSMUSG00000030279.16_143019388_143029066_1	chr6	-	755	5	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	16446	61852	16427	-61725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGAGACTGCTCAGACGCC	NA	NA	NA	NA	NA	NA	NA	NA	143029066	143019387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143019514_143023988_143024188_143025594_143025751_143027058_143027155_143028888
ENSMUSG00000030279.16_143019464_143036355_1	chr6	-	704	6	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	9157	61928	9138	-61801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAATTCACACTGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	143036355	143019463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143019514_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324
ENSMUSG00000030281.17_113448388_113449849_1	chr6	+	714	4	NNC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	0	-10252	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAAGGGCTCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	113448387	113449849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_113448749_113449165_113449345_113449587_113449651_113449738
ENSMUSG00000030281.17_113448657_113453461_1	chr6	+	627	7	ISM	ENSMUSG00000030281.17	ENSMUST00000058300.14	2302	17	269	6640	269	-6640	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGGATGCTCTCAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	113448656	113453461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113453386
ENSMUSG00000030281.17_113449244_113456016_1	chr6	+	681	8	ISM	ENSMUSG00000030281.17	ENSMUST00000058300.14	2302	17	856	4085	856	-4085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGATGCGCCTTGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	113449243	113456016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113453386_113453500_113453695_113453756_113455824_113455880_113455949
ENSMUSG00000030281.17_113449587_113456131_1	chr6	+	696	7	ISM	ENSMUSG00000030281.17	ENSMUST00000058300.14	2302	17	1199	3970	1199	-3970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGAGGTCAAAGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	113449586	113456131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113449651_113449738_113449849_113451121_113451234_113453386_113453500_113453695_113453756_113455824_113455880_113455949
ENSMUSG00000030281.17_113449755_113456262_1	chr6	+	667	7	ISM	ENSMUSG00000030281.17	ENSMUST00000058300.14	2302	17	1367	3839	1367	-3839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGAACAGTAATGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	113449754	113456262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113449849_113451121_113451234_113453386_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211
ENSMUSG00000030281.17_113453481_113458184_1	chr6	+	635	9	ISM	ENSMUSG00000030281.17	ENSMUST00000058300.14	2302	17	5093	1917	5093	-1917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGGACAAGTGTGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	113453480	113458184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144
ENSMUSG00000030281.17_113453718_113459289_1	chr6	+	652	9	ISM	ENSMUSG00000030281.17	ENSMUST00000058300.14	2302	17	5330	812	5330	-812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCGGCGCTTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	113453717	113459289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243
ENSMUSG00000030281.17_113455979_113459527_1	chr6	+	650	8	ISM	ENSMUSG00000030281.17	ENSMUST00000058300.14	2302	17	7591	574	7591	-574	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGGCGTCCGCGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	113455978	113459527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
ENSMUSG00000030281.17_113456028_113459579_1	chr6	+	653	8	ISM	ENSMUSG00000030281.17	ENSMUST00000058300.14	2302	17	7640	522	7640	-522	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCGCCGCGAGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	113456027	113459579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
ENSMUSG00000030281.17_113456091_113459626_1	chr6	+	637	8	ISM	ENSMUSG00000030281.17	ENSMUST00000058300.14	2302	17	7703	475	7703	-475	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGCGACGCCGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	113456090	113459626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
ENSMUSG00000030281.17_113457353_113459841_1	chr6	+	628	5	ISM	ENSMUSG00000030281.17	ENSMUST00000058300.14	2302	17	8965	260	8965	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGACTCTGTGCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	113457352	113459841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
ENSMUSG00000030281.17_113459274_113460101_1	chr6	+	710	2	ISM	ENSMUSG00000030281.17	ENSMUST00000058300.14	2302	17	10886	0	10886	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTAGCACTCGTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	113459273	113460101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113459340_113459457
ENSMUSG00000030284.12_113460258_113465124_1	chr6	+	956	3	ISM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	0	5175	0	-5175	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTGGTTTCACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	113460257	113465124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113461038_113461455_113461539_113465031
ENSMUSG00000030284.12_113460384_113466454_1	chr6	+	1000	5	ISM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	126	3845	126	-3845	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAGGGGGCAGCGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	113460383	113466454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394
ENSMUSG00000030284.12_113460523_113466510_1	chr6	+	917	5	ISM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	265	3789	265	-3789	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGTGTGGCCTTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	113460522	113466510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394
ENSMUSG00000030284.12_113460692_113466751_1	chr6	+	905	6	ISM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	434	3548	434	-3548	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGGGGGAACATGGC	NA	NA	NA	NA	NA	NA	NA	NA	113460691	113466751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655
ENSMUSG00000030284.12_113460816_113469131_1	chr6	+	1008	9	ISM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	558	1168	558	-1168	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAAACACGGAGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	113460815	113469131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084
ENSMUSG00000030284.12_113460950_113469181_1	chr6	+	924	9	ISM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	692	1118	692	-1118	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAGGACGGCATCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	113460949	113469181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084
ENSMUSG00000030284.12_113461477_113469725_1	chr6	+	931	9	ISM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	1219	574	1219	-574	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGCTGGCCACGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	113461476	113469725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ENSMUSG00000030284.12_113465116_113469847_1	chr6	+	907	8	ISM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	4858	452	4858	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGGGTAGATAATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	113465115	113469847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ENSMUSG00000030284.12_113466520_113470078_1	chr6	+	894	6	ISM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	6262	221	6262	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCCTCACCGTGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	113466519	113470078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ENSMUSG00000030284.12_113468612_113470304_1	chr6	+	974	4	ISM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	8354	-5	8354	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCAGTCTTAACAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	113468611	113470304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113468698_113468854_113468951_113469084_113469220_113469647
ENSMUSG00000030286.7_113492457_113494084_1	chr6	-	563	2	ISM	ENSMUSG00000030286.7	ENSMUST00000032425.7	1985	8	14529	622	14529	-622	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGTATTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	113494084	113492456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113492993_113494057
ENSMUSG00000030286.7_113492605_113494900_1	chr6	-	529	3	ISM	ENSMUSG00000030286.7	ENSMUST00000032425.7	1985	8	13713	770	13713	-770	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGAATAGCTCAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	113494900	113492604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113492993_113494057_113494141_113494842
ENSMUSG00000030286.7_113492612_113494904_1	chr6	-	526	3	ISM	ENSMUSG00000030286.7	ENSMUST00000032425.7	1985	8	13709	777	13709	-777	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGCTACTGAGAATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	113494904	113492611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113492993_113494057_113494141_113494842
ENSMUSG00000030286.7_113492828_113499368_1	chr6	-	609	6	ISM	ENSMUSG00000030286.7	ENSMUST00000032425.7	1985	8	9245	993	9245	-993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTTAACCTTGTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	113499368	113492827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113492993_113494057_113494141_113494842_113494923_113496875_113496958_113497437_113497543_113499274
ENSMUSG00000030286.7_113492951_113499752_1	chr6	-	528	7	ISM	ENSMUSG00000030286.7	ENSMUST00000032425.7	1985	8	8861	1116	8861	-1116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCGATGATGTGGAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	113499752	113492950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113492993_113494057_113494141_113494842_113494923_113496875_113496958_113497437_113497543_113499274_113499369_113499710
ENSMUSG00000030286.7_113494096_113508359_1	chr6	-	535	7	ISM	ENSMUSG00000030286.7	ENSMUST00000032425.7	1985	8	254	2261	254	-2261	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGGCCATGCCTGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	113508359	113494095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113494141_113494842_113494923_113496875_113496958_113497437_113497543_113499274_113499369_113499710_113499769_113508288
ENSMUSG00000030291.13_146544089_146551736_1	chr6	+	406	4	FSM	ENSMUSG00000030291.13	ENSMUST00000032429.9	814	4	44	364	11	-364	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAAGACCAGAAGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	146544088	146551736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_146544151_146549662_146549778_146550647_146550749_146551608
ENSMUSG00000030298.11_113705023_113706705_1	chr6	-	551	2	ISM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	10999	0	10999	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCATCCCACACAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	113706705	113705022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113705425_113706556
ENSMUSG00000030298.11_113705309_113711532_1	chr6	-	547	5	ISM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	6172	286	6172	-286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGGCAGCCTGGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	113711532	113705308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113705425_113706556_113706704_113707295_113707420_113707734_113707869_113711506
ENSMUSG00000030298.11_113705374_113711569_1	chr6	-	519	5	ISM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	6135	351	6135	-351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	874	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAACAAGGGCCAGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	113711569	113705373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113705425_113706556_113706704_113707295_113707420_113707734_113707869_113711506
ENSMUSG00000030298.11_113706631_113712031_1	chr6	-	479	5	ISM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	5673	1608	5673	-1608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGATGTTGTGTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	113712031	113706630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113706704_113707295_113707420_113707734_113707869_113711506_113711641_113712017
ENSMUSG00000030298.11_113706631_113712169_1	chr6	-	617	5	ISM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	5535	1608	5535	-1608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1403	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGATGTTGTGTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	113712169	113706630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113706704_113707295_113707420_113707734_113707869_113711506_113711641_113712017
ENSMUSG00000030298.11_113707391_113713384_1	chr6	-	501	5	ISM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	4320	2368	4320	-2368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAAGCTAGAGGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	113713384	113707390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113707420_113707734_113707869_113711506_113711641_113712017_113712170_113713332
ENSMUSG00000030298.11_113707734_113714959_1	chr6	-	582	5	ISM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	2745	2711	2745	-2711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGAGTTGTGTGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	113714959	113707733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914
ENSMUSG00000030298.11_113707838_113717688_1	chr6	-	561	6	ISM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	16	2815	16	-2815	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	773	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTGCCTGGAAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	113717688	113707837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
ENSMUSG00000030301.18_147377369_147534110_1	chr6	+	2453	13	NNC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTGTCATGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	147377368	147534110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_147377558_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493542_147493714_147508379_147508494_147533072
ENSMUSG00000030301.18_147377369_147534110_2	chr6	+	2453	13	NNC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTGTCATGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	147377368	147534110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_147377558_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491890_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
ENSMUSG00000030301.18_147464128_147493655_1	chr6	+	364	4	FSM	ENSMUSG00000030301.18	ENST00000539107.5	364	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGGGTGGCAGAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	147464127	147493655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_147464211_147491884_147491978_147492066_147492136_147493536
ENSMUSG00000030304.12_148082863_148083471_1	chr6	-	461	2	ISM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	30401	2286	30401	-2286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCGAGTTTAAAGAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	148083471	148082862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148083238_148083385
ENSMUSG00000030304.12_148083426_148092371_1	chr6	-	447	5	ISM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	21501	2849	21501	-2849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCGTTTCAGACTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	148092371	148083425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327
ENSMUSG00000030304.12_148084544_148096739_1	chr6	-	463	5	ISM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	17133	3967	17133	-3967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAACATTCATTTCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	148096739	148084543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692
ENSMUSG00000030304.12_148084651_148097535_1	chr6	-	445	6	ISM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	16337	4074	16337	-4074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGATCTCAGTTCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	148097535	148084650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495
ENSMUSG00000030304.12_148090998_148104046_1	chr6	-	504	7	ISM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	9826	10421	9826	-10421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCTGTAGATCGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	148104046	148090997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993
ENSMUSG00000030304.12_148096694_148108053_1	chr6	-	488	7	ISM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	5819	16117	5819	-16117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGTTCTTTTCACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	148108053	148096693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030
ENSMUSG00000030304.12_148097522_148108141_1	chr6	-	455	6	ISM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	5731	16945	5731	-16945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCATCAACTGCACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	148108141	148097521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030
ENSMUSG00000030313.16_148934681_148969649_1	chr6	-	1387	6	ISM	ENSMUSG00000030313.16	ENST00000354285.8	2509	9	33339	73	33339	-73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTAAAAGCAGCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	148969649	148934680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547
ENSMUSG00000030313.16_148934735_148969721_1	chr6	-	1405	6	ISM	ENSMUSG00000030313.16	ENST00000354285.8	2509	9	33267	127	33267	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCAGAGGTCACAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	148969721	148934734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547
ENSMUSG00000030313.16_148934817_148969794_1	chr6	-	1396	6	ISM	ENSMUSG00000030313.16	ENST00000354285.8	2509	9	33194	209	33194	-209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCCTTCGCCAGAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	148969794	148934816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547
ENSMUSG00000030313.16_148937981_148969919_1	chr6	-	1383	5	ISM	ENSMUSG00000030313.16	ENST00000354285.8	2509	9	33069	3373	33069	-3373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTACTTGATATGAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	148969919	148937980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547
ENSMUSG00000030313.16_148943138_148970134_1	chr6	-	1420	4	ISM	ENSMUSG00000030313.16	ENST00000354285.8	2509	9	32854	8530	32854	-8530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAAAGACCCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	148970134	148943137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148943246_148945980_148946518_148956397_148956586_148969547
ENSMUSG00000030313.16_148946258_149002757_1	chr6	-	1368	6	ISM	ENSMUSG00000030313.16	ENST00000354285.8	2509	9	231	11650	231	-11650	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACCATAGCCCGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	149002757	148946257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148986368_148986435_149002680
ENSMUSG00000030313.16_148946318_149002812_1	chr6	-	1363	6	ISM	ENSMUSG00000030313.16	ENST00000354285.8	2509	9	176	11710	176	-11710	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAGAATGGAAATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	149002812	148946317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148986368_148986435_149002680
ENSMUSG00000030313.16_148946399_149002896_1	chr6	-	1366	6	ISM	ENSMUSG00000030313.16	ENST00000354285.8	2509	9	92	11791	92	-11791	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCCTGAGGGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	149002896	148946398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148986368_148986435_149002680
ENSMUSG00000030314.17_114701868_114836801_1	chr6	+	1041	3	ISM	ENSMUSG00000030314.17	ENSMUST00000182902.8	2543	21	81778	-616	81778	610	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCCCACAGCCCACATGC	NA	NA	NA	NA	NA	NA	NA	NA	114701867	114836801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_114701936_114753917_114754041_114835951
ENSMUSG00000030315.16_114838930_114852080_1	chr6	-	864	4	NNC	ENSMUSG00000030315.16	novel	873	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGGCAACAGAACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	114852080	114838929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_114839398_114839716_114839841_114840844_114841041_114852004
ENSMUSG00000030315.16_114838930_114852080_2	chr6	-	866	4	NNC	ENSMUSG00000030315.16	novel	873	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGGCAACAGAACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	114852080	114838929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_114839398_114839716_114839841_114840844_114841034_114851995
ENSMUSG00000030315.16_114838930_114852080_3	chr6	-	869	4	FSM	ENSMUSG00000030315.16	ENST00000451674.6	873	4	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGGCAACAGAACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	114852080	114838929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_114839398_114839716_114839841_114840844_114841041_114851999
ENSMUSG00000030315.16_114839725_114843200_1	chr6	-	363	3	ISM	ENSMUSG00000030315.16	ENST00000424529.6	749	4	31	674	31	-674	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTGGTAAGTTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	114843200	114839724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_114839841_114840844_114841041_114843149
ENSMUSG00000030316.14_114981349_114989260_1	chr6	-	274	2	FSM	ENSMUSG00000030316.14	ENST00000273037.9	283	2	26	-17	26	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCTTGTCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	114989260	114981348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_114981481_114989118
ENSMUSG00000030316.14_114981349_114989260_2	chr6	-	266	2	NNC	ENSMUSG00000030316.14	novel	283	2	NA	NA	26	-7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1044	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCTTGTCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	114989260	114981348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_114981473_114989118
ENSMUSG00000030316.14_114981349_115011942_1	chr6	-	782	7	ISM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	2895	7	2895	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCTTGTCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	115011942	114981348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011911
ENSMUSG00000030316.14_114989178_115014630_1	chr6	-	700	6	ISM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	207	7836	207	-7812	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAGACTCTGCTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	115014630	114989177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
ENSMUSG00000030316.14_114989178_115014672_1	chr6	-	742	6	ISM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	165	7836	165	-7812	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAGACTCTGCTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	115014672	114989177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
ENSMUSG00000030316.14_114993044_115014786_1	chr6	-	749	5	ISM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	51	11702	51	-11678	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTGTGTGTTCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	115014786	114993043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
ENSMUSG00000030323.14_115830491_115863966_1	chr6	+	875	9	ISM	ENSMUSG00000030323.14	ENSMUST00000038234.13	4056	29	0	39685	0	-39325	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTCACCAAGGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	115830490	115863966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869
ENSMUSG00000030323.14_115867506_115887271_1	chr6	+	863	7	ISM	ENSMUSG00000030323.14	ENSMUST00000112923.7	3765	30	36910	16020	36910	-16020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCAGTGGAGATGTACA	NA	NA	NA	NA	NA	NA	NA	NA	115867505	115887271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185
ENSMUSG00000030327.9_122851433_122864563_1	chr6	+	1139	8	FSM	ENSMUSG00000030327.9	ENSMUST00000032477.6	2476	8	0	1337	0	-1105	multi-exon	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCAGGGGAGTAGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	122851432	122864563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
ENSMUSG00000030327.9_122851530_122864605_1	chr6	+	1084	8	FSM	ENSMUSG00000030327.9	ENSMUST00000032477.6	2476	8	97	1295	11	-1063	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTCAGAAGGCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	122851529	122864605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
ENSMUSG00000030327.9_122851540_122859817_1	chr6	+	525	6	ISM	ENSMUSG00000030327.9	ENST00000639811.1	2055	7	21	5851	21	-5851	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACGGGGGGCCTGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	122851539	122859817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772
ENSMUSG00000030327.9_122851540_122864662_1	chr6	+	1131	8	FSM	ENSMUSG00000030327.9	ENSMUST00000032477.6	2476	8	107	1238	21	-1006	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTATTTCAGAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	122851539	122864662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
ENSMUSG00000030327.9_122858459_122864437_1	chr6	+	515	4	ISM	ENSMUSG00000030327.9	ENST00000639811.1	2055	7	6940	1231	6940	-1231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAACCCAAATCAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	122858458	122864437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_122858542_122859226_122859336_122859772_122859957_122864298
ENSMUSG00000030327.9_122859227_122865042_1	chr6	+	1140	4	ISM	ENSMUSG00000030327.9	ENST00000639167.1	2070	5	7708	826	7708	-626	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCACAGAAGTGTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	122859226	122865042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_122859336_122859772_122859957_122863710_122863814_122864298
ENSMUSG00000030327.9_122859319_122865069_1	chr6	+	1075	4	ISM	ENSMUSG00000030327.9	ENST00000639167.1	2070	5	7800	799	7800	-599	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCATGTAATTGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	122859318	122865069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_122859336_122859772_122859957_122863710_122863814_122864298
ENSMUSG00000030327.9_122859818_122865178_1	chr6	+	1122	3	ISM	ENSMUSG00000030327.9	ENST00000639167.1	2070	5	8299	690	8299	-490	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCATTCAGTACCCACA	NA	NA	NA	NA	NA	NA	NA	NA	122859817	122865178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_122859957_122863710_122863814_122864298
ENSMUSG00000030327.9_122859849_122864700_1	chr6	+	510	2	ISM	ENSMUSG00000030327.9	ENST00000639811.1	2055	7	8330	968	8330	-968	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATTTCAGGAGAGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	122859848	122864700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_122859957_122864298
ENSMUSG00000030327.9_122859891_122865208_1	chr6	+	1079	3	ISM	ENSMUSG00000030327.9	ENST00000639167.1	2070	5	8372	660	8372	-460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTTTGACTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	122859890	122865208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_122859957_122863710_122863814_122864298
ENSMUSG00000030330.16_125016824_125025202_1	chr6	+	545	6	ISM	ENSMUSG00000030330.16	ENST00000619641.4	1269	7	41	813	0	-168	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGACAGCTGAAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	125016823	125025202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125016861_125020916_125020989_125024173_125024289_125024441_125024551_125024755_125024904_125025138
ENSMUSG00000030330.16_125016824_125025370_1	chr6	+	747	8	FSM	ENSMUSG00000030330.16	ENSMUST00000032480.14	1629	8	25	857	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCCTGGATTCCATTAC	NA	NA	NA	NA	NA	NA	NA	NA	125016823	125025370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
ENSMUSG00000030330.16_125016824_125025370_2	chr6	+	738	8	NIC	ENSMUSG00000030330.16	novel	741	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCCTGGATTCCATTAC	NA	NA	NA	NA	NA	NA	NA	NA	125016823	125025370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024280_125024444_125024551_125024755_125024904_125025138_125025201_125025330
ENSMUSG00000030330.16_125020917_125025370_1	chr6	+	546	6	ISM	ENSMUSG00000030330.16	ENST00000619641.4	1269	7	4134	645	4093	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCCTGGATTCCATTAC	NA	NA	NA	NA	NA	NA	NA	NA	125020916	125025370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125020989_125024173_125024289_125024441_125024551_125024755_125024904_125025138_125025201_125025330
ENSMUSG00000030330.16_125020917_125025965_1	chr6	+	1305	7	ISM	ENSMUSG00000030330.16	ENSMUST00000032480.14	1629	8	4118	262	4093	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	125020916	125025965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
ENSMUSG00000030330.16_125024173_125026228_1	chr6	+	1330	5	ISM	ENSMUSG00000030330.16	ENSMUST00000032480.14	1629	8	7374	-1	7349	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGCGGTGATAGT	NA	NA	NA	NA	NA	NA	NA	NA	125024172	125026228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
ENSMUSG00000030337.17_125195872_125198633_1	chr6	+	429	3	ISM	ENSMUSG00000030337.17	ENST00000535180.5	615	4	335	61	335	-61	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGAGCCATCTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	125195871	125198633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125196033_125196548_125196605_125198421
ENSMUSG00000030337.17_125195872_125198633_2	chr6	+	426	3	NNC	ENSMUSG00000030337.17	novel	615	4	NA	NA	335	-61	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGAGCCATCTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	125195871	125198633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_125196033_125196548_125196605_125198424
ENSMUSG00000030339.8_125283534_125290848_1	chr6	-	2102	10	NNC	ENSMUSG00000030339.8	novel	2107	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGGGTTTTATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	125290848	125283533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_125284435_125284892_125285110_125286156_125286183_125286421_125286530_125289005_125289086_125289232_125289330_125289714_125289874_125289956_125290078_125290352_125290450_125290552
ENSMUSG00000030340.17_125299054_125307936_1	chr6	+	347	2	ISM	ENSMUSG00000030340.17	ENST00000396966.6	2167	11	69	13378	69	-13378	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTACAAATACAACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	125299053	125307936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125299338_125307873
ENSMUSG00000030340.17_125299194_125308068_1	chr6	+	339	2	ISM	ENSMUSG00000030340.17	ENST00000396966.6	2167	11	209	13246	209	-13246	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCGCAGCGCGTCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	125299193	125308068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125299338_125307873
ENSMUSG00000030340.17_125307871_125320039_1	chr6	+	1129	9	ISM	ENSMUSG00000030340.17	ENST00000540037.5	2079	11	2	1494	2	-1275	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCCCTGCTCCTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	125307870	125320039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125308148_125309055_125309230_125314759_125314864_125315198_125315363_125315799_125315899_125316068_125316187_125319564_125319644_125319750_125319809_125319983
ENSMUSG00000030340.17_125307991_125320708_1	chr6	+	1132	11	FSM	ENSMUSG00000030340.17	ENST00000540037.5	2079	11	122	825	122	-606	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCATCTGTGCTGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	125307990	125320708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_125308148_125309055_125309230_125314759_125314864_125315198_125315363_125315799_125315899_125316068_125316187_125319564_125319644_125319750_125319809_125319983_125320040_125320184_125320261_125320661
ENSMUSG00000030340.17_125308120_125315219_1	chr6	+	344	4	ISM	ENSMUSG00000030340.17	ENST00000396966.6	2167	11	9135	6095	251	-6095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCAGAATGACTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	125308119	125315219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125308148_125309055_125309247_125314759_125314864_125315198
ENSMUSG00000030340.17_125309055_125320850_1	chr6	+	1118	10	ISM	ENSMUSG00000030340.17	ENST00000540037.5	2079	11	1186	683	1186	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCCCAGCTTCCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	125309054	125320850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125309230_125314759_125314864_125315198_125315363_125315799_125315899_125316068_125316187_125319564_125319644_125319750_125319809_125319983_125320040_125320184_125320261_125320661
ENSMUSG00000030340.17_125309114_125315283_1	chr6	+	322	3	ISM	ENSMUSG00000030340.17	ENST00000396966.6	2167	11	10129	6031	1245	-6031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGATGAGCCTGCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	125309113	125315283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125309247_125314759_125314864_125315198
ENSMUSG00000030340.17_125314760_125321042_1	chr6	+	1135	9	ISM	ENSMUSG00000030340.17	ENST00000540037.5	2079	11	6891	491	6891	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTCTGAGAGAGGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	125314759	125321042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125314864_125315198_125315363_125315799_125315899_125316068_125316187_125319564_125319644_125319750_125319809_125319983_125320040_125320184_125320261_125320661
ENSMUSG00000030340.17_125315798_125321352_1	chr6	+	1179	7	ISM	ENSMUSG00000030340.17	ENST00000540037.5	2079	11	7929	181	7929	38	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGAGAAGTGGCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	125315797	125321352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125315899_125316068_125316187_125319564_125319644_125319750_125319809_125319983_125320040_125320184_125320261_125320661
ENSMUSG00000030340.17_125316066_125320708_1	chr6	+	379	5	ISM	ENSMUSG00000030340.17	ENST00000396966.6	2167	11	17081	606	8197	-606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCATCTGTGCTGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	125316065	125320708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125316187_125319564_125319644_125319983_125320040_125320184_125320261_125320661
ENSMUSG00000030340.17_125319564_125321575_1	chr6	+	1184	5	ISM	ENSMUSG00000030340.17	ENST00000540037.5	2079	11	11695	-42	11695	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGTACCCTGTACCCC	NA	NA	NA	NA	NA	NA	NA	NA	125319563	125321575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125319644_125319750_125319809_125319983_125320040_125320184_125320261_125320661
ENSMUSG00000030341.18_125326888_125337696_1	chr6	+	751	7	ISM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	202	1751	202	-1751	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTGCTAGGTCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	125326887	125337696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125327026_125333787_125333942_125334275_125334405_125334683_125334834_125335016_125335096_125337459_125337537_125337672
ENSMUSG00000030341.18_125326934_125337751_1	chr6	+	760	7	ISM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	248	1696	248	-1696	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCCCGGTGGAGGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	125326933	125337751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125327026_125333787_125333942_125334275_125334405_125334683_125334834_125335016_125335096_125337459_125337537_125337672
ENSMUSG00000030341.18_125333789_125338325_1	chr6	+	795	8	ISM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	7103	1122	7103	-1122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCACTCTGGGCTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	125333788	125338325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125333942_125334275_125334405_125334683_125334834_125335016_125335096_125337459_125337537_125337672_125337787_125338054_125338084_125338261
ENSMUSG00000030341.18_125333869_125338349_1	chr6	+	739	8	ISM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	7183	1098	7183	-1098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTTAGTTCTCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	125333868	125338349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125333942_125334275_125334405_125334683_125334834_125335016_125335096_125337459_125337537_125337672_125337787_125338054_125338084_125338261
ENSMUSG00000030341.18_125333913_125338426_1	chr6	+	772	8	ISM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	7227	1021	7227	-1021	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTGAGGTAGTCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	125333912	125338426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125333942_125334275_125334405_125334683_125334834_125335016_125335096_125337459_125337537_125337672_125337787_125338054_125338084_125338261
ENSMUSG00000030341.18_125338067_125339097_1	chr6	+	751	3	ISM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	11381	350	11381	-350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTGTACATAGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	125338066	125339097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125338084_125338261_125338548_125338649
ENSMUSG00000030341.18_125338370_125339217_1	chr6	+	746	2	ISM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	11684	230	11684	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGGCACAATGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	125338369	125339217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125338548_125338649
ENSMUSG00000030342.9_125437229_125471754_1	chr6	-	1222	8	NNC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	125471754	125437228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439379_125440643_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000030342.9_125437229_125471754_2	chr6	-	1222	8	NNC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	125471754	125437228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_125437690_125438188_125438273_125439082_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000030342.9_125437229_125471754_3	chr6	-	1222	8	NNC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	125471754	125437228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_125437690_125438194_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000030344.12_126830061_126841777_1	chr6	+	659	4	ISM	ENSMUSG00000030344.12	ENST00000228850.6	3038	5	-9	9489	0	-9489	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAACCTAGTGATCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	126830060	126841777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_126830214_126834063_126834175_126837217_126837314_126841478
ENSMUSG00000030344.12_126830123_126841840_1	chr6	+	660	4	ISM	ENSMUSG00000030344.12	ENST00000545990.6	3034	5	45	9430	0	-9426	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTGTCCATCAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	126830122	126841840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_126830214_126834063_126834175_126837217_126837314_126841478
ENSMUSG00000030344.12_126830123_126841895_1	chr6	+	715	4	ISM	ENSMUSG00000030344.12	ENST00000545990.6	3034	5	45	9375	0	-9371	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTACAGTGGCCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	126830122	126841895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_126830214_126834063_126834175_126837217_126837314_126841478
ENSMUSG00000030344.12_126834118_126842036_1	chr6	+	711	3	ISM	ENSMUSG00000030344.12	ENSMUST00000202878.4	3023	6	4011	9232	3995	-9230	internal_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATCAAGGAGAGTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	126834117	126842036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_126834175_126837217_126837314_126841478
ENSMUSG00000030344.12_126837279_126842152_1	chr6	+	709	2	ISM	ENSMUSG00000030344.12	ENSMUST00000202574.2	2879	4	7156	9119	7156	-9114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGAGGTCCTTACCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	126837278	126842152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_126837314_126841478
ENSMUSG00000030344.12_126843308_126851159_1	chr6	+	751	2	ISM	ENSMUSG00000030344.12	ENSMUST00000202574.2	2879	4	13185	112	13185	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCATGCCACGCACACT	NA	NA	NA	NA	NA	NA	NA	NA	126843307	126851159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_126843822_126850922
ENSMUSG00000030344.12_126843599_126851271_1	chr6	+	572	2	ISM	ENSMUSG00000030344.12	ENSMUST00000202574.2	2879	4	13476	0	13476	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATAAGTGTGGCTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	126843598	126851271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_126843822_126850922
ENSMUSG00000030346.17_126900013_126904584_1	chr6	-	1684	4	ISM	ENSMUSG00000030346.17	ENSMUST00000112220.8	2233	9	11966	0	11966	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGAGGGACTTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	126904584	126900012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500
ENSMUSG00000030346.17_126900248_126907040_1	chr6	-	1687	6	ISM	ENSMUSG00000030346.17	ENSMUST00000112220.8	2233	9	9510	235	9510	130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACCTGCTCCACCGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	126907040	126900247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904651_126905103_126905191_126906955
ENSMUSG00000030347.7_126919308_126923595_1	chr6	+	464	3	ISM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	2379	29335	2379	-29335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAGCTGAAAAAGTTACG	NA	NA	NA	NA	NA	NA	NA	NA	126919307	126923595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_126919470_126921754_126921901_126923439
ENSMUSG00000030347.7_126919414_126927077_1	chr6	+	441	4	ISM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	2485	25853	2485	-25853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGAATTCACTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	126919413	126927077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_126919470_126921754_126921901_126923439_126923622_126927020
ENSMUSG00000030347.7_126932238_126944032_1	chr6	+	452	4	ISM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	15309	8898	15309	-8898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATGTCAGAGGTAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	126932237	126944032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_126932296_126932811_126932941_126938928_126939004_126943842
ENSMUSG00000030347.7_126932862_126951485_1	chr6	+	451	5	ISM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	15933	1445	15933	-1445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCGGACAGTGCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	126932861	126951485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449
ENSMUSG00000030347.7_126943982_126952332_1	chr6	+	449	4	ISM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	27053	598	27053	-598	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCCAACTGAAGCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	126943981	126952332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_126944046_126950518_126950577_126951449_126951518_126952073
ENSMUSG00000030352.16_127938359_127942682_1	chr6	-	3209	3	ISM	ENSMUSG00000030352.16	ENSMUST00000112171.8	2584	9	170990	-1406	170990	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACTGTTATTTAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	127942682	127938358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_127941463_127942200_127942285_127942661
ENSMUSG00000030352.16_127938572_127943362_1	chr6	-	3125	4	ISM	ENSMUSG00000030352.16	ENSMUST00000112171.8	2584	9	170310	-1193	170310	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGGCATTCTGAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	127943362	127938571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344
ENSMUSG00000030352.16_127938708_127943780_1	chr6	-	3162	5	ISM	ENSMUSG00000030352.16	ENSMUST00000112171.8	2584	9	169892	-1057	169892	-349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGACAGGGAGCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	127943780	127938707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691
ENSMUSG00000030352.16_127938891_127944235_1	chr6	-	3157	6	ISM	ENSMUSG00000030352.16	ENSMUST00000112171.8	2584	9	169437	-874	169437	-532	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATCCTGTCTCCGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	127944235	127938890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043
ENSMUSG00000030352.16_127939031_128120516_1	chr6	-	3137	8	FSM	ENSMUSG00000030352.16	ENSMUST00000112173.8	3819	8	10	672	7	-672	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGTGACCTCAAGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	128120516	127939030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128120476
ENSMUSG00000030352.16_127940870_128011208_1	chr6	-	1258	7	ISM	ENSMUSG00000030352.16	ENSMUST00000112171.8	2584	9	102464	1105	102464	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTAGCTCTCTGATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	128011208	127940869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128
ENSMUSG00000030352.16_127940975_128120516_1	chr6	-	1293	9	FSM	ENSMUSG00000030352.16	ENSMUST00000032503.12	1405	9	7	105	7	-105	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCTGGAGCACCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	128120516	127940974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344_128060445_128120476
ENSMUSG00000030353.16_128205144_128277376_1	chr6	-	1509	11	FSM	ENSMUSG00000030353.16	ENSMUST00000112157.4	1909	11	400	0	400	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAGGAGCTAGTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	128277376	128205143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ENSMUSG00000030353.16_128205318_128277530_1	chr6	-	1489	11	FSM	ENSMUSG00000030353.16	ENSMUST00000112157.4	1909	11	246	174	246	-174	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATGGTAGGGGGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	128277530	128205317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ENSMUSG00000030353.16_128205565_128277701_1	chr6	-	1501	10	ISM	ENSMUSG00000030353.16	ENSMUST00000112157.4	1909	11	75	421	75	-421	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGTGTGCTGGAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	128277701	128205564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ENSMUSG00000030357.11_128407358_128409477_1	chr6	-	579	2	ISM	ENSMUSG00000030357.11	ENST00000457486.2	1334	10	5996	-381	5996	-292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGGTTTTCCAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	128409477	128407357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_128407844_128409384
ENSMUSG00000030357.11_128407396_128409550_1	chr6	-	614	2	ISM	ENSMUSG00000030357.11	ENST00000457486.2	1334	10	5923	-343	5923	-330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAAACTCCTGGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	128409550	128407395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_128407844_128409384
ENSMUSG00000030357.11_128407455_128409592_1	chr6	-	597	2	ISM	ENSMUSG00000030357.11	ENST00000457486.2	1334	10	5881	-284	5881	284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCACGTGGTAGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	128409592	128407454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_128407844_128409384
ENSMUSG00000030357.11_128407739_128410756_1	chr6	-	706	5	ISM	ENSMUSG00000030357.11	ENST00000457486.2	1334	10	4717	0	4717	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTTCCGCTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	128410756	128407738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665
ENSMUSG00000030357.11_128409598_128411794_1	chr6	-	625	6	ISM	ENSMUSG00000030357.11	ENST00000457486.2	1334	10	3679	1859	3679	-1859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	819	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGCCTGTTTCGCCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	128411794	128409597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714
ENSMUSG00000030357.11_128410178_128412819_1	chr6	-	673	6	ISM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	2821	3112	2654	-2439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAAATGCAAAAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	128412819	128410177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676
ENSMUSG00000030357.11_128410178_128413556_1	chr6	-	654	7	ISM	ENSMUSG00000030357.11	ENST00000457486.2	1334	10	1917	2439	1917	-2439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAAATGCAAAAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	128413556	128410177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411793_128412676_128412820_128413532
ENSMUSG00000030357.11_128410488_128413679_1	chr6	-	701	6	ISM	ENSMUSG00000030357.11	ENST00000457486.2	1334	10	1794	2749	1794	-2749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCACAGACAAGGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	128413679	128410487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_128410573_128410665_128410757_128411267_128411425_128411714_128411793_128412676_128412820_128413532
ENSMUSG00000030357.11_128410523_128413612_1	chr6	-	642	6	ISM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	2028	3457	1861	-2784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGTGAAAGAGAGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	128413612	128410522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532
ENSMUSG00000030357.11_128410725_128415420_1	chr6	-	607	6	ISM	ENSMUSG00000030357.11	ENST00000457486.2	1334	10	53	2986	53	-2986	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGATCCCACCGCACGCT	NA	NA	NA	NA	NA	NA	NA	NA	128415420	128410724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_128410757_128411267_128411425_128411714_128411793_128412676_128412820_128413532_128413678_128415368
ENSMUSG00000030357.11_128411283_128415406_1	chr6	-	589	5	ISM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	234	4217	67	-3544	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTCAAACCTAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	128415406	128411282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ENSMUSG00000030357.11_128411319_128415471_1	chr6	-	618	5	ISM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	169	4253	2	-3580	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCAGCGCATGGAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	128415471	128411318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ENSMUSG00000030357.11_128411384_128415510_1	chr6	-	592	5	ISM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	130	4318	-37	-3645	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGCTCTGCTTTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	128415510	128411383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ENSMUSG00000030357.11_128411715_128415640_1	chr6	-	681	4	ISM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	0	4649	0	-3976	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAAAGTATAGTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	128415640	128411714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_128411836_128412676_128412820_128413532_128413678_128415368
ENSMUSG00000030393.9_10223779_10224294_1	chr7	-	431	2	FSM	ENSMUSG00000030393.9	ENST00000339656.8	460	2	9	20	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGACACATGTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	10224294	10223778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_10224023_10224107
ENSMUSG00000030393.9_10223779_10224294_2	chr7	-	428	2	NNC	ENSMUSG00000030393.9	novel	460	2	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGACACATGTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	10224294	10223778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_10224023_10224110
ENSMUSG00000030393.9_10223779_10224294_3	chr7	-	433	2	FSM	ENSMUSG00000030393.9	ENST00000221735.12	438	2	5	0	5	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	8226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGACACATGTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	10224294	10223778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_10224021_10224103
ENSMUSG00000030399.3_19144988_19156107_1	chr7	+	2045	8	FSM	ENSMUSG00000030399.3	ENSMUST00000208710.2	2742	8	38	659	0	598	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTACTTGGATAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	19144987	19156107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_19145072_19148043_19148256_19148821_19148977_19149325_19149459_19150643_19150816_19153363_19153488_19154031_19154222_19155132
ENSMUSG00000030399.3_19148170_19156240_1	chr7	+	1968	7	ISM	ENSMUSG00000030399.3	ENSMUST00000208710.2	2742	8	3220	526	3182	-526	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTATGTAGCCCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	19148169	19156240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_19148256_19148821_19148977_19149325_19149459_19150643_19150816_19153363_19153488_19154031_19154222_19155132
ENSMUSG00000030399.3_19148859_19156380_1	chr7	+	1985	6	ISM	ENSMUSG00000030399.3	ENSMUST00000208710.2	2742	8	3909	386	3871	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCACTAACCTGACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	19148858	19156380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_19148977_19149325_19149459_19150643_19150816_19153363_19153488_19154031_19154222_19155132
ENSMUSG00000030399.3_19149340_19156528_1	chr7	+	2001	5	ISM	ENSMUSG00000030399.3	ENSMUST00000208710.2	2742	8	4390	238	4352	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTTGGTGATCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	19149339	19156528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_19149459_19150643_19150816_19153363_19153488_19154031_19154222_19155132
ENSMUSG00000030399.3_19150642_19156766_1	chr7	+	2122	4	ISM	ENSMUSG00000030399.3	ENSMUST00000208710.2	2742	8	5692	0	5654	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGGTTGATCTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	19150641	19156766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_19150816_19153363_19153488_19154031_19154222_19155132
ENSMUSG00000030401.17_19024994_19029803_1	chr7	+	794	7	FSM	ENSMUSG00000030401.17	ENSMUST00000108468.5	1076	7	0	282	0	-282	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCGGCCGAGCCATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	19024993	19029803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_19025102_19027000_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
ENSMUSG00000030401.17_19024994_19029869_1	chr7	+	860	7	FSM	ENSMUSG00000030401.17	ENSMUST00000108468.5	1076	7	0	216	0	-216	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTCTAAGAGTCCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	19024993	19029869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_19025102_19027000_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
ENSMUSG00000030401.17_19027103_19030085_1	chr7	+	866	6	ISM	ENSMUSG00000030401.17	ENSMUST00000108468.5	1076	7	2109	0	2109	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTCTGTGTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	19027102	19030085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
ENSMUSG00000030403.10_18990973_18992801_1	chr7	-	839	3	ISM	ENSMUSG00000030403.10	ENSMUST00000032561.9	2215	13	12941	119	12941	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTCCGGGAAGATGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	18992801	18990972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_18991680_18991786_18991845_18992727
ENSMUSG00000030403.10_18991299_18994827_1	chr7	-	842	8	ISM	ENSMUSG00000030403.10	ENSMUST00000032561.9	2215	13	10915	445	10915	-445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGGAATTTTTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	18994827	18991298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748
ENSMUSG00000030406.8_18891178_18898547_1	chr7	-	1518	11	FSM	ENSMUSG00000030406.8	ENST00000263281.7	1520	11	2	0	2	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGTATATATTTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	18898547	18891177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_18891613_18893439_18893579_18893670_18893760_18893885_18893956_18894255_18894317_18894519_18894680_18896473_18896619_18896792_18896897_18897434_18897539_18897962_18898071_18898444
ENSMUSG00000030406.8_18891178_18898549_1	chr7	-	1514	11	NNC	ENSMUSG00000030406.8	novel	1520	11	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGTATATATTTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	18898549	18891177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_18891613_18893439_18893579_18893670_18893760_18893885_18893956_18894255_18894317_18894519_18894680_18896473_18896619_18896798_18896897_18897434_18897539_18897962_18898071_18898444
ENSMUSG00000030406.8_18891178_18898549_2	chr7	-	1514	11	NNC	ENSMUSG00000030406.8	novel	1520	11	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGTATATATTTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	18898549	18891177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_18891613_18893439_18893579_18893670_18893760_18893885_18893956_18894255_18894317_18894519_18894680_18896473_18896619_18896792_18896891_18897434_18897539_18897962_18898071_18898444
ENSMUSG00000030406.8_18891178_18898549_3	chr7	-	1513	11	NNC	ENSMUSG00000030406.8	novel	1520	11	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGTATATATTTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	18898549	18891177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_18891613_18893439_18893579_18893670_18893760_18893885_18893956_18894255_18894317_18894519_18894673_18896473_18896619_18896792_18896897_18897434_18897539_18897962_18898071_18898444
ENSMUSG00000030406.8_18891255_18898549_1	chr7	-	1258	11	FSM	ENSMUSG00000030406.8	ENST00000304207.12	1258	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCCTACTGTGTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	18898549	18891254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_18891494_18891570_18891613_18893439_18893579_18893670_18893760_18893885_18893956_18894255_18894317_18894519_18894680_18896473_18896619_18896792_18896897_18897434_18897539_18898444
ENSMUSG00000030409.17_18817774_18824965_1	chr7	+	1490	10	ISM	ENSMUSG00000030409.17	ENSMUST00000032568.14	2761	15	0	2781	0	-2376	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAGACTGAGAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	18817773	18824965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_18818080_18819910_18820003_18820256_18820341_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822190_18822835_18822922_18824853
ENSMUSG00000030409.17_18817884_18825692_1	chr7	+	1467	11	ISM	ENSMUSG00000030409.17	ENSMUST00000108473.10	2588	13	74	2054	0	-1649	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGAGGTTCTCACCCG	NA	NA	NA	NA	NA	NA	NA	NA	18817883	18825692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_18818080_18819910_18820003_18820256_18820341_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822190_18822835_18822922_18824853_18824966_18825605
ENSMUSG00000030409.17_18817884_18825756_1	chr7	+	1531	11	ISM	ENSMUSG00000030409.17	ENSMUST00000108473.10	2588	13	74	1990	0	-1585	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTCTCCAGGTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	18817883	18825756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_18818080_18819910_18820003_18820256_18820341_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822190_18822835_18822922_18824853_18824966_18825605
ENSMUSG00000030409.17_18819910_18827341_1	chr7	+	1914	12	ISM	ENSMUSG00000030409.17	ENSMUST00000108473.10	2588	13	2100	405	2026	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTCATCCGATTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	18819909	18827341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_18820003_18820256_18820341_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822190_18822835_18822922_18824853_18824966_18825605_18825770_18825863_18825962_18826874
ENSMUSG00000030409.17_18820255_18826557_1	chr7	+	1493	12	ISM	ENSMUSG00000030409.17	ENSMUST00000032568.14	2761	15	2481	1189	2371	-784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTCCCACGTCCGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	18820254	18826557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_18820341_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822190_18822835_18822922_18824853_18824966_18825605_18825770_18825863_18825962_18826132_18826180_18826467
ENSMUSG00000030417.16_35341407_35343839_1	chr7	-	426	4	NNC	ENSMUSG00000030417.16	novel	684	6	NA	NA	2795	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGATCTGCATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	35343839	35341406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_35341611_35342045_35342112_35343048_35343141_35343775
ENSMUSG00000030417.16_35341537_35346891_1	chr7	-	499	6	FSM	ENSMUSG00000030417.16	ENSMUST00000118501.8	684	6	55	130	55	-100	multi-exon	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAGCAGTGTCTAGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	35346891	35341536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_35341611_35342039_35342112_35343048_35343141_35343775_35343838_35345568_35345607_35346730
ENSMUSG00000030417.16_35341594_35346917_1	chr7	-	468	6	FSM	ENSMUSG00000030417.16	ENSMUST00000118501.8	684	6	29	187	29	-157	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGACTCCGATGAAGACG	NA	NA	NA	NA	NA	NA	NA	NA	35346917	35341593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_35341611_35342039_35342112_35343048_35343141_35343775_35343838_35345568_35345607_35346730
ENSMUSG00000030421.10_37660369_37661953_1	chr7	-	817	2	ISM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	57014	952	34194	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTCTAAAATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	37661953	37660368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37661123_37661890
ENSMUSG00000030421.10_37660369_37696147_1	chr7	-	1452	10	NNC	ENSMUSG00000030421.10	novel	1459	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTCTAAAATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	37696147	37660368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_37660525_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669116_37681035_37681172_37682294_37682374_37696111
ENSMUSG00000030421.10_37660369_37696147_2	chr7	-	1459	10	FSM	ENSMUSG00000030421.10	ENST00000360605.8	1459	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTCTAAAATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	37696147	37660368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_37660525_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111
ENSMUSG00000030421.10_37660369_37696147_3	chr7	-	1452	10	NNC	ENSMUSG00000030421.10	novel	1459	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	797	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTCTAAAATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	37696147	37660368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_37660525_37661897_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111
ENSMUSG00000030421.10_37660369_37696147_4	chr7	-	1453	10	NNC	ENSMUSG00000030421.10	novel	1459	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTCTAAAATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	37696147	37660368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_37660525_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682300_37682374_37696111
ENSMUSG00000030421.10_37660369_37696147_5	chr7	-	1454	10	NNC	ENSMUSG00000030421.10	novel	1459	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTCTAAAATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	37696147	37660368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_37660525_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669035_37669123_37681035_37681172_37682294_37682374_37696111
ENSMUSG00000030421.10_37660369_37696147_6	chr7	-	1452	10	NNC	ENSMUSG00000030421.10	novel	1459	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTCTAAAATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	37696147	37660368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_37660525_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668856_37669030_37669123_37681035_37681172_37682294_37682374_37696111
ENSMUSG00000030421.10_37660563_37662857_1	chr7	-	844	3	ISM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	56110	1146	33290	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAGGCACTTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37662857	37660562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37661123_37661890_37662135_37662817
ENSMUSG00000030421.10_37660618_37662912_1	chr7	-	844	3	ISM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	56055	1201	33235	-249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACACTTTTAAAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	37662912	37660617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37661123_37661890_37662135_37662817
ENSMUSG00000030421.10_37660726_37664734_1	chr7	-	860	4	ISM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	54233	1309	31413	-357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGTTACTTTTCAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	37664734	37660725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655
ENSMUSG00000030421.10_37660789_37664807_1	chr7	-	870	4	ISM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	54160	1372	31340	-420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGGCTTCGTTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	37664807	37660788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655
ENSMUSG00000030421.10_37664832_37718636_1	chr7	-	844	8	ISM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	331	5415	331	-4463	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTATTCAGTGAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	37718636	37664831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ENSMUSG00000030421.10_37664943_37718740_1	chr7	-	837	8	ISM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	227	5526	227	-4574	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGACACAGGTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	37718740	37664942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ENSMUSG00000030421.10_37666795_37718947_1	chr7	-	933	7	ISM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	20	7378	20	-6426	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTGAAGAGCTGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	37718947	37666794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ENSMUSG00000030421.10_37666837_37718947_1	chr7	-	891	7	ISM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	20	7420	20	-6468	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACCCAAGAATACATTT	NA	NA	NA	NA	NA	NA	NA	NA	37718947	37666836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ENSMUSG00000030432.13_4795873_4798068_1	chr7	+	1104	5	NNC	ENSMUSG00000030432.13	novel	1106	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTCCTTTATATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	4795872	4798068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797177_4797416
ENSMUSG00000030432.13_4795873_4798068_2	chr7	+	1104	5	NNC	ENSMUSG00000030432.13	novel	1106	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTCCTTTATATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	4795872	4798068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_4795998_4796319_4796409_4796501_4796626_4797067_4797182_4797416
ENSMUSG00000030432.13_4795989_4798068_1	chr7	+	993	5	FSM	ENSMUSG00000030432.13	ENSMUST00000032597.12	1106	5	116	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTCCTTTATATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	4795988	4798068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797182_4797416
ENSMUSG00000030447.16_55491819_55563266_1	chr7	+	2905	23	ISM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	0	19084	0	-16953	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCCAAGGTAGGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	55491818	55563266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187
ENSMUSG00000030447.16_55491954_55569228_1	chr7	+	2840	24	ISM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	135	13122	0	-10991	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCAAGTCATCTGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	55491953	55569228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167
ENSMUSG00000030447.16_55521607_55572560_1	chr7	+	2887	24	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	29604	7659	29604	-7659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCGACATGAGTACGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	55521606	55572560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494
ENSMUSG00000030447.16_55523438_55574936_1	chr7	+	2874	24	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	31435	5283	31435	-5283	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGGGGACCCCACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	55523437	55574936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859
ENSMUSG00000030447.16_55524738_55576157_1	chr7	+	2862	24	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	32735	4062	32735	-4062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTACCCAGCAATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	55524737	55576157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035
ENSMUSG00000030447.16_55528863_55579822_1	chr7	+	2841	23	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	36860	397	36860	-397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAATCTGGTGATGGCG	NA	NA	NA	NA	NA	NA	NA	NA	55528862	55579822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030447.16_55536507_55579944_1	chr7	+	2863	22	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	44504	275	44504	-275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGTCTTTATGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	55536506	55579944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030447.16_55546493_55580574_1	chr7	+	2823	17	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	54490	-355	54490	328	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATGAAAGCCAGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	55546492	55580574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030447.16_55546493_55580623_1	chr7	+	2872	17	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	54490	-404	54490	377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACATGAAAGGAACACCAG	NA	NA	NA	NA	NA	NA	NA	NA	55546492	55580623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030447.16_55548020_55580728_1	chr7	+	2872	16	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	56017	-509	56017	482	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGACCGGGCCTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	55548019	55580728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030447.16_55548091_55580783_1	chr7	+	2856	16	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	56088	-564	56088	537	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTATCTCACTATAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	55548090	55580783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030447.16_55549738_55580907_1	chr7	+	2856	15	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	57735	-688	57735	661	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCTACATGGGAAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	55549737	55580907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030447.16_55549792_55580961_1	chr7	+	2856	15	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	57789	-742	57789	715	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCTTAAGGAACATAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	55549791	55580961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030447.16_55557109_55581312_1	chr7	+	2854	11	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	65106	-1093	65106	-1038	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAACTCTTCACCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	55557108	55581312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030447.16_55558120_55581489_1	chr7	+	2946	10	ISM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	66301	861	66117	-861	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTAGAATATACTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	55558119	55581489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030447.16_55563201_55581650_1	chr7	+	2901	9	ISM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	71382	700	71198	-700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCAGTACTAAGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	55563200	55581650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030447.16_55569253_55581797_1	chr7	+	2888	8	ISM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	77434	553	77250	-553	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCTTACATTGGCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	55569252	55581797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030447.16_55573683_55581978_1	chr7	+	2859	6	ISM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	81864	372	81680	-372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAACCTGCCATTTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	55573682	55581978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030447.16_55576084_55582350_1	chr7	+	2944	3	ISM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	84265	0	84081	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGGAAAAAATAAAACATT	NA	NA	NA	NA	NA	NA	NA	NA	55576083	55582350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55576275_55577934_55578083_55579745
ENSMUSG00000030447.16_55576162_55582350_1	chr7	+	2866	3	ISM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	84343	0	84159	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGGAAAAAATAAAACATT	NA	NA	NA	NA	NA	NA	NA	NA	55576161	55582350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55576275_55577934_55578083_55579745
ENSMUSG00000030450.12_55943571_55973390_1	chr7	+	479	6	ISM	ENSMUSG00000030450.12	ENST00000353809.9	1710	16	106	105764	106	-105764	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTTCTTAGACAATGT	NA	NA	NA	NA	NA	NA	NA	NA	55943570	55973390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55943624_55945188_55945269_55946847_55947002_55966110_55966177_55971241_55971299_55973321
ENSMUSG00000030450.12_55945236_55974440_1	chr7	+	474	6	ISM	ENSMUSG00000030450.12	ENST00000353809.9	1710	16	1771	104714	1771	-104714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGCAGAAGTGATCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	55945235	55974440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55945269_55946847_55947002_55966110_55966177_55971241_55971299_55973321_55973447_55974401
ENSMUSG00000030450.12_55946963_55977068_1	chr7	+	493	6	ISM	ENSMUSG00000030450.12	ENST00000353809.9	1710	16	3498	102086	3498	-102086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCTCCTCAGACTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	55946962	55977068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55947002_55966110_55966177_55971241_55971299_55973321_55973447_55974401_55974541_55977001
ENSMUSG00000030450.12_55971246_55978518_1	chr7	+	514	5	ISM	ENSMUSG00000030450.12	ENST00000353809.9	1710	16	27781	100636	27781	-100636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACAGCTGTGCGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	55971245	55978518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55971299_55973321_55973447_55974401_55974541_55977001_55977135_55978454
ENSMUSG00000030450.12_55974458_55981762_1	chr7	+	478	5	ISM	ENSMUSG00000030450.12	ENST00000353809.9	1710	16	30993	97392	30993	-97392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCCATGTTCTTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	55974457	55981762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55974541_55977001_55977135_55978454_55978603_55980065_55980124_55981706
ENSMUSG00000030450.12_55977001_56006875_1	chr7	+	474	5	ISM	ENSMUSG00000030450.12	ENST00000353809.9	1710	16	33536	72279	33536	-72279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGCTAATTTTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	55977000	56006875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55977135_55978454_55978603_55980065_55980124_55981706_55981816_56006850
ENSMUSG00000030450.12_55977059_56006918_1	chr7	+	459	5	ISM	ENSMUSG00000030450.12	ENST00000353809.9	1710	16	33594	72236	33594	-72236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACACAGAGTAGAGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	55977058	56006918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55977135_55978454_55978603_55980065_55980124_55981706_55981816_56006850
ENSMUSG00000030450.12_55978531_56064177_1	chr7	+	474	6	ISM	ENSMUSG00000030450.12	ENST00000353809.9	1710	16	35066	14977	35066	-14977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTCTCAGCCTTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	55978530	56064177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55978603_55980065_55980124_55981706_55981816_56006850_56006979_56063478_56063539_56064130
ENSMUSG00000030450.12_55978579_56064235_1	chr7	+	484	6	ISM	ENSMUSG00000030450.12	ENST00000353809.9	1710	16	35114	14919	35114	-14919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGTGTGATCCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	55978578	56064235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55978603_55980065_55980124_55981706_55981816_56006850_56006979_56063478_56063539_56064130
ENSMUSG00000030451.17_55700625_55815026_1	chr7	+	5040	32	FSM	ENSMUSG00000030451.17	ENST00000613386.4	5087	32	9	38	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCTGAATGCTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	55700624	55815026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_55700697_55717731_55717847_55744012_55744187_55780916_55781088_55781546_55781651_55782169_55782321_55784343_55784559_55784778_55784912_55785017_55785146_55785233_55785430_55786334_55786469_55786968_55787143_55787216_55787354_55787467_55787620_55788526_55788719_55795511_55795700_55796284_55796478_55798386_55798570_55802190_55802373_55802791_55802940_55803013_55803213_55803524_55803756_55804762_55804902_55806134_55806279_55806607_55806751_55807062_55807307_55807395_55807530_55809121_55809221_55813489_55813659_55813756_55813883_55814642_55814772_55814885
ENSMUSG00000030451.17_55742285_55763271_1	chr7	+	474	3	FSM	ENSMUSG00000030451.17	ENST00000619355.1	474	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGCCCTAGAAGTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	55742284	55763271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_55742463_55762851_55763022_55763145
ENSMUSG00000030451.17_55758445_55762932_1	chr7	+	330	2	ISM	ENSMUSG00000030451.17	ENST00000562845.1	723	4	13	1702	13	-339	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGCTGTACTACAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	55758444	55762932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55758635_55762792
ENSMUSG00000030451.17_55762925_55764577_1	chr7	+	331	3	ISM	ENSMUSG00000030451.17	ENST00000562845.1	723	4	4493	57	4493	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGCAAACAGTGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	55762924	55764577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55763022_55763145_55763271_55764468
ENSMUSG00000030451.17_55784465_55787557_1	chr7	+	1086	8	ISM	ENSMUSG00000030451.17	ENST00000619021.4	4806	30	66700	27469	-2749	-16197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGCAGTTCAGAATATTC	NA	NA	NA	NA	NA	NA	NA	NA	55784464	55787557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55784559_55784778_55784912_55785017_55785146_55785233_55785430_55786334_55786469_55786968_55787143_55787216_55787354_55787467
ENSMUSG00000030451.17_55785016_55788718_1	chr7	+	1115	7	ISM	ENSMUSG00000030451.17	ENST00000619021.4	4806	30	67251	26308	-2198	-15036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTGGAATTGGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	55785015	55788718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55785146_55785233_55785430_55786334_55786469_55786968_55787143_55787216_55787354_55787467_55787620_55788526
ENSMUSG00000030451.17_55787055_55798478_1	chr7	+	1042	7	ISM	ENSMUSG00000030451.17	ENST00000619021.4	4806	30	69290	16548	-159	-5276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATGCTGACATCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	55787054	55798478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55787143_55787216_55787354_55787467_55787620_55788526_55788719_55795511_55795700_55796284_55796478_55798386
ENSMUSG00000030451.17_55787264_55802880_1	chr7	+	1224	8	ISM	ENSMUSG00000030451.17	ENST00000426501.5	2190	13	50	3871	50	-874	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCTTCTTGGGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	55787263	55802880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55787354_55787467_55787620_55788526_55788719_55795511_55795700_55796284_55796478_55798386_55798538_55802203_55802373_55802791
ENSMUSG00000030451.17_55787467_55803048_1	chr7	+	1229	8	ISM	ENSMUSG00000030451.17	ENST00000426501.5	2190	13	253	3703	253	-706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCTTGACTGCCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	55787466	55803048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55787620_55788526_55788719_55795511_55795700_55796284_55796478_55798386_55798538_55802203_55802373_55802791_55802940_55803013
ENSMUSG00000030451.17_55787520_55803098_1	chr7	+	1226	8	ISM	ENSMUSG00000030451.17	ENST00000426501.5	2190	13	306	3653	306	-656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTCCGCACTCTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	55787519	55803098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55787620_55788526_55788719_55795511_55795700_55796284_55796478_55798386_55798538_55802203_55802373_55802791_55802940_55803013
ENSMUSG00000030451.17_55787563_55803157_1	chr7	+	1242	8	ISM	ENSMUSG00000030451.17	ENST00000426501.5	2190	13	349	3594	349	-597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCAGCTTTGCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	55787562	55803157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55787620_55788526_55788719_55795511_55795700_55796284_55796478_55798386_55798538_55802203_55802373_55802791_55802940_55803013
ENSMUSG00000030451.17_55788570_55803589_1	chr7	+	1262	8	ISM	ENSMUSG00000030451.17	ENST00000426501.5	2190	13	1356	3162	1356	-165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTCATTGGAGGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	55788569	55803589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55788719_55795511_55795700_55796284_55796478_55798386_55798538_55802203_55802373_55802791_55802940_55803013_55803213_55803524
ENSMUSG00000030451.17_55788636_55803629_1	chr7	+	1236	8	ISM	ENSMUSG00000030451.17	ENST00000426501.5	2190	13	1422	3122	1422	-125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGGTCATGCATGATGA	NA	NA	NA	NA	NA	NA	NA	NA	55788635	55803629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55788719_55795511_55795700_55796284_55796478_55798386_55798538_55802203_55802373_55802791_55802940_55803013_55803213_55803524
ENSMUSG00000030451.17_55788673_55803693_1	chr7	+	1263	8	ISM	ENSMUSG00000030451.17	ENST00000426501.5	2190	13	1459	3058	1459	-61	internal_fragment	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCGTGCAGTTCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	55788672	55803693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55788719_55795511_55795700_55796284_55796478_55798386_55798538_55802203_55802373_55802791_55802940_55803013_55803213_55803524
ENSMUSG00000030451.17_55795627_55804819_1	chr7	+	1221	8	ISM	ENSMUSG00000030451.17	ENST00000426501.5	2190	13	8413	1932	-7896	1065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGGCTGAGTTGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	55795626	55804819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55795700_55796284_55796478_55798386_55798538_55802203_55802373_55802791_55802940_55803013_55803213_55803524_55803756_55804762
ENSMUSG00000030451.17_55796320_55806165_1	chr7	+	1226	8	ISM	ENSMUSG00000030451.17	ENST00000426501.5	2190	13	9106	586	-7203	-585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTAAAGCTGTACATCC	NA	NA	NA	NA	NA	NA	NA	NA	55796319	55806165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55796478_55798386_55798538_55802203_55802373_55802791_55802940_55803013_55803213_55803524_55803756_55804762_55804902_55806134
ENSMUSG00000030451.17_55796378_55806209_1	chr7	+	1212	8	ISM	ENSMUSG00000030451.17	ENST00000426501.5	2190	13	9164	542	-7145	-541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACCAAGACAAGCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	55796377	55806209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55796478_55798386_55798538_55802203_55802373_55802791_55802940_55803013_55803213_55803524_55803756_55804762_55804902_55806134
ENSMUSG00000030451.17_55796428_55806260_1	chr7	+	1213	8	ISM	ENSMUSG00000030451.17	ENST00000426501.5	2190	13	9214	491	-7095	-490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAACTCTTCAGACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	55796427	55806260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55796478_55798386_55798538_55802203_55802373_55802791_55802940_55803013_55803213_55803524_55803756_55804762_55804902_55806134
ENSMUSG00000030451.17_55798386_55806751_1	chr7	+	1326	8	ISM	ENSMUSG00000030451.17	ENST00000426501.5	2190	13	11172	0	-5137	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTTGTCTAATCTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	55798385	55806751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55798538_55802203_55802373_55802791_55802940_55803013_55803213_55803524_55803756_55804762_55804902_55806134_55806279_55806607
ENSMUSG00000030451.17_55802204_55806750_1	chr7	+	1171	7	ISM	ENSMUSG00000030451.17	ENSMUST00000205303.2	14403	91	101579	74130	-1319	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACTTGTCTAATCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	55802203	55806750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_55802373_55802791_55802940_55803013_55803211_55803524_55803756_55804762_55804902_55806134_55806279_55806607
ENSMUSG00000030451.17_55803527_55815025_1	chr7	+	1594	10	NIC	ENSMUSG00000030451.17	novel	14403	91	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGATCTGAATGCTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	55803526	55815025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_55803756_55804762_55804902_55806134_55806279_55806607_55806751_55807038_55807307_55807395_55807533_55809121_55809221_55813489_55813659_55813756_55813883_55814885
ENSMUSG00000030451.17_55803650_55815025_1	chr7	+	1471	10	NIC	ENSMUSG00000030451.17	novel	14403	91	NA	NA	127	-1	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGATCTGAATGCTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	55803649	55815025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_55803756_55804762_55804902_55806134_55806279_55806607_55806751_55807038_55807307_55807395_55807533_55809121_55809221_55813489_55813659_55813756_55813883_55814885
ENSMUSG00000030451.17_55803702_55815026_1	chr7	+	1420	10	NIC	ENSMUSG00000030451.17	novel	1596	10	NA	NA	179	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCTGAATGCTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	55803701	55815026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_55803756_55804762_55804902_55806134_55806279_55806607_55806751_55807038_55807307_55807395_55807533_55809121_55809221_55813489_55813659_55813756_55813883_55814885
ENSMUSG00000030452.17_55582434_55594335_1	chr7	-	1278	5	ISM	ENSMUSG00000030452.17	ENST00000674289.1	1655	6	13975	161	-1561	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATTTTTATTCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	55594335	55582433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228
ENSMUSG00000030452.17_55582450_55594263_1	chr7	-	1190	5	ISM	ENSMUSG00000030452.17	ENST00000674289.1	1655	6	14047	177	-1489	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTGTAAAGGTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	55594263	55582449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228
ENSMUSG00000030452.17_55582454_55594338_1	chr7	-	1261	5	ISM	ENSMUSG00000030452.17	ENST00000674289.1	1655	6	13972	181	-1564	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATTATTGTAAAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	55594338	55582453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228
ENSMUSG00000030452.17_55582463_55594361_1	chr7	-	1275	5	ISM	ENSMUSG00000030452.17	ENST00000674289.1	1655	6	13949	190	-1587	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAACATTGTATTATTG	NA	NA	NA	NA	NA	NA	NA	NA	55594361	55582462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228
ENSMUSG00000030452.17_55582535_55594352_1	chr7	-	1194	5	ISM	ENSMUSG00000030452.17	ENST00000674289.1	1655	6	13958	262	-1578	229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGAAATTACTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	55594352	55582534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228
ENSMUSG00000030452.17_55582561_55594407_1	chr7	-	1217	5	NNC	ENSMUSG00000030452.17	novel	3039	6	NA	NA	-1633	203	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTTAAGTTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	55594407	55582560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592779_55594228
ENSMUSG00000030452.17_55582764_55592787_1	chr7	-	767	4	FSM	ENSMUSG00000030452.17	ENST00000426223.1	754	4	-13	0	-13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGAAGTTCTTAATAATA	NA	NA	NA	NA	NA	NA	NA	NA	55592787	55582763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_55583296_55585545_55585630_55587319_55587411_55592727
ENSMUSG00000030470.16_48480376_48485352_1	chr7	-	444	4	ISM	ENSMUSG00000030470.16	ENSMUST00000167786.4	899	6	8047	230	3953	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGCTTTCTCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	48485352	48480375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_48480455_48482309_48482404_48483486_48483620_48485214
ENSMUSG00000030470.16_48480376_48489308_1	chr7	-	438	4	NNC	ENSMUSG00000030470.16	novel	697	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGCTTTCTCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	48489308	48480375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_48480455_48482309_48482404_48483494_48483620_48489168
ENSMUSG00000030470.16_48480376_48489308_2	chr7	-	615	5	ISM	ENSMUSG00000030470.16	ENSMUST00000167786.4	899	6	4091	230	-3	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGCTTTCTCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	48489308	48480375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_48480455_48482309_48482404_48483486_48483620_48485214_48485384_48489168
ENSMUSG00000030470.16_48480376_48489308_3	chr7	-	446	4	FSM	ENSMUSG00000030470.16	ENST00000649842.1	443	4	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGCTTTCTCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	48489308	48480375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_48480455_48482309_48482404_48483486_48483620_48489168
ENSMUSG00000030470.16_48482310_48489308_1	chr7	-	536	4	ISM	ENSMUSG00000030470.16	ENSMUST00000167786.4	899	6	4091	2164	-3	-1934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGGTTGGACAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	48489308	48482309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_48482404_48483486_48483620_48485214_48485384_48489168
ENSMUSG00000030470.16_48483487_48497781_1	chr7	-	476	4	ISM	ENSMUSG00000030470.16	ENSMUST00000032658.14	877	6	0	3339	0	-3111	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGTCACAGTGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	48497781	48483486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_48483620_48485214_48485384_48489168_48489307_48497745
ENSMUSG00000030471.18_48445698_48474465_1	chr7	+	1640	15	ISM	ENSMUSG00000030471.18	ENSMUST00000118927.8	2410	17	6947	2723	6947	-2723	internal_fragment	TRUE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACACCATACAAGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	48445697	48474465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381
ENSMUSG00000030471.18_48449582_48476760_1	chr7	+	1696	15	ISM	ENSMUSG00000030471.18	ENSMUST00000118927.8	2410	17	10831	428	10831	-428	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCACCTCAAAATGCACT	NA	NA	NA	NA	NA	NA	NA	NA	48449581	48476760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ENSMUSG00000030471.18_48449622_48476729_1	chr7	+	1619	15	NNC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	10871	-459	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	66	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAAAGTCCTTCGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	48449621	48476729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465205_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ENSMUSG00000030471.18_48452762_48476984_1	chr7	+	1626	13	ISM	ENSMUSG00000030471.18	ENSMUST00000118927.8	2410	17	14011	204	14011	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAAAAAACCTAATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	48452761	48476984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ENSMUSG00000030471.18_48454937_48477188_1	chr7	+	1719	11	ISM	ENSMUSG00000030471.18	ENSMUST00000118927.8	2410	17	16186	0	16186	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAGTTTCTAATGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	48454936	48477188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ENSMUSG00000030483.15_25610662_25625747_1	chr7	+	894	5	NNC	ENSMUSG00000030483.15	novel	905	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATCAGTACTCCTATTG	NA	NA	NA	NA	NA	NA	NA	NA	25610661	25625747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_25610826_25610978_25611129_25616358_25616547_25616712_25616855_25625497
ENSMUSG00000030483.15_25610662_25625747_2	chr7	+	899	5	FSM	ENSMUSG00000030483.15	ENST00000593831.1	905	5	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATCAGTACTCCTATTG	NA	NA	NA	NA	NA	NA	NA	NA	25610661	25625747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_25610826_25610978_25611129_25616358_25616547_25616712_25616855_25625492
ENSMUSG00000030491.17_35193665_35228631_1	chr7	-	1116	11	NNC	ENSMUSG00000030491.17	novel	1188	11	NA	NA	67	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGAAACCACTAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	35228631	35193664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_35193757_35200819_35200896_35203578_35203656_35204400_35204496_35207689_35207783_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537
ENSMUSG00000030491.17_35193665_35228631_2	chr7	-	1121	11	FSM	ENSMUSG00000030491.17	ENST00000421545.2	1188	11	67	0	67	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGAAACCACTAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	35228631	35193664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35207689_35207783_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537
ENSMUSG00000030493.14_35092345_35094696_1	chr7	-	360	3	ISM	ENSMUSG00000030493.14	ENSMUST00000154597.2	831	5	1437	224	1437	-224	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTCCAAGAACTGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	35094696	35092344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_35092517_35094399_35094553_35094661
ENSMUSG00000030493.14_35092406_35094740_1	chr7	-	343	3	ISM	ENSMUSG00000030493.14	ENSMUST00000154597.2	831	5	1393	285	1393	-285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTAAGGCCCCCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	35094740	35092405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_35092517_35094399_35094553_35094661
ENSMUSG00000030493.14_35094445_35095746_1	chr7	-	357	3	ISM	ENSMUSG00000030493.14	ENSMUST00000154597.2	831	5	387	2324	387	-2324	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGCCAGCCAGTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	35095746	35094444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_35094553_35094661_35094802_35095637
ENSMUSG00000030493.14_35094741_35095933_1	chr7	-	357	2	ISM	ENSMUSG00000030493.14	ENSMUST00000154597.2	831	5	200	2620	200	-2620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGCATTCTCTATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	35095933	35094740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_35094802_35095637
ENSMUSG00000030498.16_51528715_51644201_1	chr7	+	2175	8	NNC	ENSMUSG00000030498.16	novel	2181	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACACATTATTTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	51528714	51644201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_51528990_51537659_51537825_51547004_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ENSMUSG00000030498.16_51528798_51643415_1	chr7	+	1441	8	FSM	ENSMUSG00000030498.16	ENSMUST00000107591.9	2232	8	0	791	0	-786	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAATCTAAACTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	51528797	51643415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_51529119_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ENSMUSG00000030499.10_34341463_34352058_1	chr7	-	657	6	FSM	ENSMUSG00000030499.10	ENST00000588881.5	940	6	51	232	51	-232	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACCAAGAGCAAAGACGT	NA	NA	NA	NA	NA	NA	NA	NA	34352058	34341462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34350997_34351115_34352008
ENSMUSG00000030505.18_49428185_49478733_1	chr7	+	1333	13	ISM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	91	29280	91	-29280	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGATTTTACCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	49428184	49478733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691
ENSMUSG00000030505.18_49428292_49498293_1	chr7	+	1401	13	ISM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	198	9720	198	-9720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATCATGAGTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	49428291	49498293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242
ENSMUSG00000030505.18_49430097_49507142_1	chr7	+	1307	14	ISM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	2003	871	2003	-871	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAGAATAAGAAGGATC	NA	NA	NA	NA	NA	NA	NA	NA	49430096	49507142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ENSMUSG00000030505.18_49431766_49507330_1	chr7	+	1326	12	ISM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	3672	683	3672	-683	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGATCCTGGCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	49431765	49507330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ENSMUSG00000030505.18_49437022_49507526_1	chr7	+	1294	10	ISM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	8928	487	8928	-487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAATAATCCTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	49437021	49507526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ENSMUSG00000030505.18_49448138_49507787_1	chr7	+	1304	8	ISM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	20044	226	20044	-226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGGCCTAGCATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	49448137	49507787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ENSMUSG00000030505.18_49467834_49508014_1	chr7	+	1339	6	ISM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	39740	-1	39740	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAATGTTTTCATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	49467833	49508014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ENSMUSG00000030510.12_66393252_66433200_1	chr7	+	855	6	ISM	ENSMUSG00000030510.12	ENST00000538112.6	1513	11	14	38398	0	-38390	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCCTCCCTAAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	66393251	66433200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_66393500_66413836_66414097_66423337_66423457_66429298_66429418_66431541_66431600_66433149
ENSMUSG00000030510.12_66393433_66435784_1	chr7	+	792	8	ISM	ENSMUSG00000030510.12	ENST00000538112.6	1513	11	195	35814	181	-35806	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCTGCTATTAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	66393432	66435784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_66393500_66413836_66414097_66423337_66423457_66429298_66429418_66431541_66431600_66433149_66433201_66434524_66434618_66435759
ENSMUSG00000030510.12_66393438_66434618_1	chr7	+	763	7	ISM	ENSMUSG00000030510.12	ENST00000538112.6	1513	11	200	36980	186	-36972	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTCTGTATTTACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	66393437	66434618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_66393500_66413836_66414097_66423337_66423457_66429298_66429418_66431541_66431600_66433149_66433201_66434524
ENSMUSG00000030510.12_66413917_66439357_1	chr7	+	766	8	ISM	ENSMUSG00000030510.12	ENSMUST00000208521.2	1159	10	0	32233	0	-32233	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGATGGAAGCAGACGTG	NA	NA	NA	NA	NA	NA	NA	NA	66413916	66439357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_66414097_66423337_66423453_66429298_66429418_66431541_66431600_66433149_66433201_66434524_66434618_66435759_66435889_66439336
ENSMUSG00000030510.12_66413917_66439411_1	chr7	+	820	8	ISM	ENSMUSG00000030510.12	ENSMUST00000208521.2	1159	10	0	32179	0	-32179	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTAGCCGATTCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	66413916	66439411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_66414097_66423337_66423453_66429298_66429418_66431541_66431600_66433149_66433201_66434524_66434618_66435759_66435889_66439336
ENSMUSG00000030510.12_66414043_66445565_1	chr7	+	758	9	ISM	ENSMUSG00000030510.12	ENSMUST00000208521.2	1159	10	126	26025	122	-26025	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATCTCGAGCCCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	66414042	66445565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_66414097_66423337_66423453_66429298_66429418_66431541_66431600_66433149_66433201_66434524_66434618_66435759_66435889_66439336_66439444_66445533
ENSMUSG00000030510.12_66423338_66445687_1	chr7	+	826	8	ISM	ENSMUSG00000030510.12	ENSMUST00000208521.2	1159	10	9421	25903	9417	-25903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCTCCCCAAGTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	66423337	66445687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_66423453_66429298_66429418_66431541_66431600_66433149_66433201_66434524_66434618_66435759_66435889_66439336_66439444_66445533
ENSMUSG00000030510.12_66429299_66471590_1	chr7	+	864	8	ISM	ENSMUSG00000030510.12	ENSMUST00000208521.2	1159	10	15382	0	15378	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGCACAATGTGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	66429298	66471590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_66429418_66431541_66431600_66433149_66433201_66434524_66434618_66435759_66435889_66439336_66439444_66445533_66445688_66471437
ENSMUSG00000030512.14_65710086_65711918_1	chr7	+	402	2	ISM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	0	12417	0	-12417	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGCTATTGATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	65710085	65711918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_65710441_65711871
ENSMUSG00000030512.14_65711988_65720360_1	chr7	+	364	6	ISM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	1902	3975	1902	-3975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACTGACAAAAAGAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	65711987	65720360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65719866_65719947_65720337
ENSMUSG00000030512.14_65713514_65720413_1	chr7	+	386	5	ISM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	3428	3922	3428	-3922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGATGTGTTGGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	65713513	65720413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_65713594_65718914_65718962_65719171_65719275_65719866_65719947_65720337
ENSMUSG00000030512.14_65718914_65721073_1	chr7	+	401	5	ISM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	8828	3262	8828	-3262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGAAAGCTGTTGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	65718913	65721073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_65718962_65719171_65719275_65719866_65719947_65720337_65720414_65720979
ENSMUSG00000030512.14_65719170_65724091_1	chr7	+	377	5	ISM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	9084	244	9084	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGATAGAAGACGACACAG	NA	NA	NA	NA	NA	NA	NA	NA	65719169	65724091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_65719275_65719866_65719947_65720337_65720414_65720979_65721074_65724069
ENSMUSG00000030516.15_64945913_64962179_1	chr7	-	2833	7	ISM	ENSMUSG00000030516.15	ENST00000614355.5	7112	28	58813	-2	58584	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGTTTGGTTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	64962179	64945912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081
ENSMUSG00000030516.15_64946236_64962647_1	chr7	-	2855	8	ISM	ENSMUSG00000030516.15	ENSMUST00000032729.8	6102	27	58116	-220	58116	220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACAAGGTCATTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	64962647	64946235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302
ENSMUSG00000030516.15_64946308_64962715_1	chr7	-	2851	8	ISM	ENSMUSG00000030516.15	ENSMUST00000032729.8	6102	27	58048	-148	58048	148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTATTCTCTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	64962715	64946307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302
ENSMUSG00000030516.15_64946456_64962798_1	chr7	-	2786	8	ISM	ENSMUSG00000030516.15	ENSMUST00000032729.8	6102	27	57965	0	57965	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTCTTTGGGCTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	64962798	64946455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302
ENSMUSG00000030516.15_64946902_64963960_1	chr7	-	2834	9	ISM	ENSMUSG00000030516.15	ENST00000614355.5	7112	28	57032	987	56803	-446	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGGTAATGTGCACACA	NA	NA	NA	NA	NA	NA	NA	NA	64963960	64946901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64963840
ENSMUSG00000030516.15_64946973_64964046_1	chr7	-	2849	9	ISM	ENSMUSG00000030516.15	ENST00000614355.5	7112	28	56946	1058	56717	-517	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTCTTTCCAAAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	64964046	64946972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64963840
ENSMUSG00000030516.15_64947043_64964084_1	chr7	-	2817	9	ISM	ENSMUSG00000030516.15	ENST00000614355.5	7112	28	56908	1128	56679	-587	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCACTGCTTAACTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	64964084	64947042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64963840
ENSMUSG00000030516.15_64947252_64964712_1	chr7	-	2910	10	ISM	ENSMUSG00000030516.15	ENST00000614355.5	7112	28	56280	1337	56051	-796	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTAATGAGTATTATATT	NA	NA	NA	NA	NA	NA	NA	NA	64964712	64947251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64963840_64964081_64964406
ENSMUSG00000030516.15_64950870_64968267_1	chr7	-	2848	10	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	52720	4957	52496	-4414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTCAAAGTCTGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	64968267	64950869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111
ENSMUSG00000030516.15_64952580_64972272_1	chr7	-	2863	12	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	48715	6667	48491	-6124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGTTGAAACTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	64972272	64952579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241
ENSMUSG00000030516.15_64952639_64972342_1	chr7	-	2874	12	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	48645	6726	48421	-6183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTCCCCAAAAACTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	64972342	64952638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241
ENSMUSG00000030516.15_64952717_64972386_1	chr7	-	2840	12	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	48601	6804	48377	-6261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAAAGTCCGAAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	64972386	64952716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241
ENSMUSG00000030516.15_64952821_64972773_1	chr7	-	2847	13	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	48214	6908	47990	-6365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCAGTTAACGGAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	64972773	64952820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702
ENSMUSG00000030516.15_64952869_64972826_1	chr7	-	2852	13	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	48161	6956	47937	-6413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACCCCCCTCAGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	64972826	64952868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702
ENSMUSG00000030516.15_64952927_64972873_1	chr7	-	2841	13	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	48114	7014	47890	-6471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCAGACCCACCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	64972873	64952926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702
ENSMUSG00000030516.15_64956170_64973808_1	chr7	-	2870	13	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	47179	10257	46955	-9714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCCAGCTCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	64973808	64956169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736
ENSMUSG00000030516.15_64960751_64976042_1	chr7	-	2826	13	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	44945	14838	44721	-14295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCCTTCCTCCTAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	64976042	64960750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64960980_64962081_64962180_64962302_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009
ENSMUSG00000030516.15_64960905_64978750_1	chr7	-	2869	14	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	42237	14992	42013	-14449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGAAGAATATTACCGGA	NA	NA	NA	NA	NA	NA	NA	NA	64978750	64960904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64960980_64962081_64962180_64962302_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671
ENSMUSG00000030516.15_64962131_64979443_1	chr7	-	2842	14	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	41544	16218	41320	-15675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTCCCTCAGAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	64979443	64962130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64962180_64962302_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373
ENSMUSG00000030516.15_64962419_64985893_1	chr7	-	2861	14	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	35094	16506	34870	-15963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGGATCCAGCAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	64985893	64962418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779
ENSMUSG00000030516.15_64962542_64986313_1	chr7	-	2841	15	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	34674	16629	34450	-16086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACGAGCCTCTCCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	64986313	64962541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244
ENSMUSG00000030516.15_64962652_64986809_1	chr7	-	2850	16	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	34178	16739	33954	-16196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTATTCTTCAACAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	64986809	64962651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790
ENSMUSG00000030516.15_64962710_64986868_1	chr7	-	2851	16	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	34119	16797	33895	-16254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGAGCAGCCAGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	64986868	64962709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790
ENSMUSG00000030516.15_64962816_64989984_1	chr7	-	2858	17	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	31003	16903	30779	-16360	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTTCAGAACGAGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	64989984	64962815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897
ENSMUSG00000030516.15_64962971_64990132_1	chr7	-	2851	17	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	30855	17058	30631	-16515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTCTCGGAACTATGAC	NA	NA	NA	NA	NA	NA	NA	NA	64990132	64962970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897
ENSMUSG00000030516.15_64963082_64992426_1	chr7	-	2844	18	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	28561	17169	28337	-16626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGAGCCAAATCTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	64992426	64963081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364
ENSMUSG00000030516.15_64963839_64993487_1	chr7	-	2921	18	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	27500	17926	27276	-17383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCAGTGCTGCCCCGAC	NA	NA	NA	NA	NA	NA	NA	NA	64993487	64963838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362
ENSMUSG00000030516.15_64964020_65020614_1	chr7	-	2854	20	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	373	18107	149	-17564	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGCAGTTAATCATAAT	NA	NA	NA	NA	NA	NA	NA	NA	65020614	64964019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ENSMUSG00000030516.15_64964407_65020763_1	chr7	-	2942	19	ISM	ENSMUSG00000030516.15	ENSMUST00000032729.8	6102	27	0	17951	0	-17951	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAGCAAGCATTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	65020763	64964406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ENSMUSG00000030516.15_64990087_65163064_1	chr7	-	491	5	ISM	ENSMUSG00000030516.15	ENST00000356107.11	6951	29	14477	44083	14477	-43631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTGCATGACCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	65163064	64990086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65162946
ENSMUSG00000030521.12_64026377_64026979_1	chr7	-	240	2	ISM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	15037	102	15037	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTCTGTCATCGTTA	NA	NA	NA	NA	NA	NA	NA	NA	64026979	64026376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64026553_64026915
ENSMUSG00000030521.12_64026483_64027110_1	chr7	-	265	2	ISM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	14906	208	14906	-208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCAAATTAATGATGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	64027110	64026482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64026553_64026915
ENSMUSG00000030521.12_64032681_64035513_1	chr7	-	251	3	ISM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	6503	6406	6503	-6406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTGAGATTTATGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	64035513	64032680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64032777_64034049_64034118_64035426
ENSMUSG00000030521.12_64032739_64035568_1	chr7	-	248	3	ISM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	6448	6464	6448	-6464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATGCGTATGAATATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	64035568	64032738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64032777_64034049_64034118_64035426
ENSMUSG00000030521.12_64034066_64037256_1	chr7	-	254	3	ISM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	4760	7791	4760	-7791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGATACGAGATCAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	64037256	64034065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64034118_64035426_64035569_64037196
ENSMUSG00000030521.12_64035526_64038657_1	chr7	-	256	3	ISM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	3359	9251	3359	-9251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTTGGCAGCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	64038657	64035525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64035569_64037196_64037366_64038613
ENSMUSG00000030521.12_64037335_64039252_1	chr7	-	247	3	ISM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	2764	11060	2764	-11060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGTGATCAACATAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	64039252	64037334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64037366_64038613_64038772_64039194
ENSMUSG00000030521.12_64038688_64039373_1	chr7	-	263	2	ISM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	2643	12413	2643	-12413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGGGCCCAGACGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	64039373	64038687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_64038772_64039194
ENSMUSG00000030523.19_63867237_63876487_1	chr7	+	553	6	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	18329	42257	18329	1903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAGAAAAAGAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	63867236	63876487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63867409_63868855_63868991_63869989_63870041_63873438_63873580_63874373_63874404_63876463
ENSMUSG00000030523.19_63868889_63876650_1	chr7	+	511	5	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	19981	42094	19981	2066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGAAGGCCTTGGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	63868888	63876650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63868991_63869989_63870041_63873438_63873580_63874373_63874404_63876463
ENSMUSG00000030523.19_63869996_63876756_1	chr7	+	509	4	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	21088	41988	21088	2172	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATCTCGAGGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	63869995	63876756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63870041_63873438_63873580_63874373_63874404_63876463
ENSMUSG00000030523.19_63873452_63879856_1	chr7	+	503	4	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	24544	38888	24544	5272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGGTTGCCATGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	63873451	63879856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63873580_63874373_63874404_63876463_63876757_63879804
ENSMUSG00000030523.19_63874373_63880033_1	chr7	+	553	3	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	25465	38711	25465	5449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGAGCTGTGGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	63874372	63880033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63874404_63876463_63876757_63879804
ENSMUSG00000030523.19_63876696_63885578_1	chr7	+	498	4	ISM	ENSMUSG00000030523.19	ENSMUST00000206263.2	5493	27	41396	33927	27788	10994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGAATTCTATAATGCG	NA	NA	NA	NA	NA	NA	NA	NA	63876695	63885578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63876757_63879804_63880034_63884705_63884829_63885493
ENSMUSG00000030523.19_63879818_63887430_1	chr7	+	498	4	ISM	ENSMUSG00000030523.19	ENSMUST00000206263.2	5493	27	44518	32075	30910	12846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTATGTCATCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	63879817	63887430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63880034_63884705_63884829_63885493_63885626_63887403
ENSMUSG00000030523.19_63879930_63890186_1	chr7	+	507	5	ISM	ENSMUSG00000030523.19	ENSMUST00000206263.2	5493	27	44630	29319	31022	15602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAACTCAGCCAGAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	63879929	63890186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63880034_63884705_63884829_63885493_63885626_63887403_63887533_63890167
ENSMUSG00000030523.19_63879955_63890266_1	chr7	+	562	5	ISM	ENSMUSG00000030523.19	ENSMUST00000206263.2	5493	27	44655	29239	31047	15682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGGCCATCCTTCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	63879954	63890266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63880034_63884705_63884829_63885493_63885626_63887403_63887533_63890167
ENSMUSG00000030523.19_63884789_63890371_1	chr7	+	505	4	ISM	ENSMUSG00000030523.19	ENSMUST00000206263.2	5493	27	49489	29134	35881	15787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTCAACAAATATCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	63884788	63890371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63884829_63885493_63885626_63887403_63887533_63890167
ENSMUSG00000030523.19_63885542_63893237_1	chr7	+	532	4	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	36634	25507	36634	18653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCTTGCATCCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	63885541	63893237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63885626_63887403_63887533_63890167_63890420_63893170
ENSMUSG00000030523.19_63887427_63893345_1	chr7	+	533	3	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	38519	25399	38519	18761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACTAGAATTCATAGT	NA	NA	NA	NA	NA	NA	NA	NA	63887426	63893345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63887533_63890167_63890420_63893170
ENSMUSG00000030523.19_63890278_63897144_1	chr7	+	515	4	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	41370	21600	41370	-21600	internal_fragment	TRUE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTGGAAGTTCCAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	63890277	63897144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63890420_63893170_63893364_63895691_63895837_63897109
ENSMUSG00000030523.19_63890341_63897185_1	chr7	+	493	4	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	41433	21559	41433	-21559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACAGGCCGGTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	63890340	63897185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63890420_63893170_63893364_63895691_63895837_63897109
ENSMUSG00000030523.19_63890390_63897242_1	chr7	+	501	4	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	41482	21502	41482	-21502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGCGCCTCAGCGGTCG	NA	NA	NA	NA	NA	NA	NA	NA	63890389	63897242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63890420_63893170_63893364_63895691_63895837_63897109
ENSMUSG00000030523.19_63893217_63897949_1	chr7	+	511	4	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	44309	20795	44309	-20795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAAGAACTGAAAAAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	63893216	63897949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63893364_63895691_63895837_63897109_63897313_63897933
ENSMUSG00000030523.19_63893280_63898001_1	chr7	+	500	4	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	44372	20743	44372	-20743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCGGGAAAAGGAGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	63893279	63898001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63893364_63895691_63895837_63897109_63897313_63897933
ENSMUSG00000030523.19_63893325_63898060_1	chr7	+	514	4	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	44417	20684	44417	-20684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGAGGTATGCCAGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	63893324	63898060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63893364_63895691_63895837_63897109_63897313_63897933
ENSMUSG00000030525.9_62749203_62757373_1	chr7	-	644	4	ISM	ENSMUSG00000030525.9	ENST00000635884.1	1345	8	104623	231	104623	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGGGGACCCCGACCT	NA	NA	NA	NA	NA	NA	NA	NA	62757373	62749202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_62749491_62754725_62754813_62755751_62755947_62757299
ENSMUSG00000030525.9_62749447_62798386_1	chr7	-	630	6	ISM	ENSMUSG00000030525.9	ENST00000635884.1	1345	8	63610	475	63610	-475	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGGCCGGGAGAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	62798386	62749446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_62749491_62754725_62754813_62755751_62755947_62757299_62757468_62760144_62760225_62798330
ENSMUSG00000030525.9_62755795_62861942_1	chr7	-	642	6	ISM	ENSMUSG00000030525.9	ENST00000635884.1	1345	8	54	6823	54	-6823	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTTGCTGCCTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	62861942	62755794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_62755947_62757299_62757468_62760144_62760225_62798330_62798441_62809284_62809330_62861855
ENSMUSG00000030530.16_80039638_80041332_1	chr7	-	1484	2	ISM	ENSMUSG00000030530.16	ENST00000681865.1	3957	15	7238	712	7238	-694	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATATATTTTCACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80041332	80039637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80041045_80041255
ENSMUSG00000030530.16_80039829_80041963_1	chr7	-	1481	4	ISM	ENSMUSG00000030530.16	ENST00000681865.1	3957	15	6607	903	6607	-885	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACCATCCTTTATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	80041963	80039828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934
ENSMUSG00000030530.16_80039880_80042014_1	chr7	-	1481	4	ISM	ENSMUSG00000030530.16	ENST00000681865.1	3957	15	6556	954	6556	-936	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGGCCAGCACGGGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	80042014	80039879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934
ENSMUSG00000030530.16_80039939_80042075_1	chr7	-	1483	4	ISM	ENSMUSG00000030530.16	ENST00000681865.1	3957	15	6495	1013	6495	-995	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCTCTCAGCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	80042075	80039938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934
ENSMUSG00000030530.16_80040079_80042335_1	chr7	-	1500	5	ISM	ENSMUSG00000030530.16	ENST00000681865.1	3957	15	6235	1153	6235	-1135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTACTTGAAGAAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	80042335	80040078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217
ENSMUSG00000030530.16_80040185_80042497_1	chr7	-	1470	6	ISM	ENSMUSG00000030530.16	ENST00000681865.1	3957	15	6073	1259	6073	-1241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTCTCTGAGTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80042497	80040184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421
ENSMUSG00000030530.16_80040345_80043209_1	chr7	-	1492	8	ISM	ENSMUSG00000030530.16	ENST00000681865.1	3957	15	5361	1419	5361	-1401	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCAGAGACTGCTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	80043209	80040344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156
ENSMUSG00000030530.16_80040396_80043264_1	chr7	-	1496	8	ISM	ENSMUSG00000030530.16	ENST00000681865.1	3957	15	5306	1470	5306	-1452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATTTTTTTATCTTGCG	NA	NA	NA	NA	NA	NA	NA	NA	80043264	80040395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156
ENSMUSG00000030530.16_80040473_80043336_1	chr7	-	1491	8	ISM	ENSMUSG00000030530.16	ENST00000681865.1	3957	15	5234	1547	5234	-1529	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGAGCGCCCTTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	80043336	80040472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156
ENSMUSG00000030530.16_80040641_80045223_1	chr7	-	1497	9	ISM	ENSMUSG00000030530.16	ENST00000681865.1	3957	15	3347	1715	3347	-1697	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCCTGCATCGGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	80045223	80040640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082
ENSMUSG00000030530.16_80041002_80047674_1	chr7	-	1492	13	ISM	ENSMUSG00000030530.16	ENST00000681865.1	3957	15	896	2076	896	-2058	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGCCCACCAGGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	80047674	80041001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645
ENSMUSG00000030530.16_80041321_80047886_1	chr7	-	1489	13	ISM	ENSMUSG00000030530.16	ENST00000681865.1	3957	15	684	2395	684	-2377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTCTCTACACCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	80047886	80041320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047736_80047842
ENSMUSG00000030530.16_80041539_80048405_1	chr7	-	1499	13	ISM	ENSMUSG00000030530.16	ENST00000681865.1	3957	15	165	2613	165	-2595	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGATCCGGCTGGCGAA	NA	NA	NA	NA	NA	NA	NA	NA	80048405	80041538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047736_80047842_80047942_80048341
ENSMUSG00000030530.16_80041587_80048474_1	chr7	-	1520	13	ISM	ENSMUSG00000030530.16	ENST00000681865.1	3957	15	96	2661	96	-2643	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGATGGGTTTAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	80048474	80041586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047736_80047842_80047942_80048341
ENSMUSG00000030532.7_79992880_79995526_1	chr7	+	848	4	FSM	ENSMUSG00000030532.7	ENST00000559898.5	847	4	-1	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCTCTGTGCCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	79992879	79995526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_79992998_79993286_79993343_79993463_79993799_79995187
ENSMUSG00000030533.17_79975597_79978260_1	chr7	-	593	6	ISM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	11707	554	11707	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTCCTCAGCCCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	79978260	79975596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200
ENSMUSG00000030533.17_79975789_79978474_1	chr7	-	577	6	ISM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	11493	746	11493	-421	internal_fragment	TRUE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACTCTGCAGTCGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	79978474	79975788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440
ENSMUSG00000030533.17_79976116_79978861_1	chr7	-	576	6	ISM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	11106	1073	11106	-748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGATGATCCGCCGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	79978861	79976115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769
ENSMUSG00000030533.17_79977429_79979395_1	chr7	-	610	6	ISM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	10572	2386	10572	-2061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTCTCTCTGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	79979395	79977428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253
ENSMUSG00000030533.17_79978536_79981507_1	chr7	-	618	5	ISM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	8460	3493	8460	-3168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCTGGCGGCGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	79981507	79978535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300
ENSMUSG00000030533.17_79979331_79982890_1	chr7	-	627	4	ISM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	7077	4288	7077	-3963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTTTGATGCGGACGTG	NA	NA	NA	NA	NA	NA	NA	NA	79982890	79979330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79979396_79980085_79980181_79981300_79981602_79982724
ENSMUSG00000030533.17_79980110_79983845_1	chr7	-	622	4	ISM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	6122	5067	6122	-4742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACTGGCCAAGCAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	79983845	79980109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79980181_79981300_79981602_79982724_79982897_79983767
ENSMUSG00000030533.17_79981374_79984474_1	chr7	-	603	4	ISM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	5493	6331	5493	-6006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGGTGTCTCTCTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	79984474	79981373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79981602_79982724_79982897_79983767_79983939_79984442
ENSMUSG00000030533.17_79981419_79984537_1	chr7	-	621	4	ISM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	5430	6376	5430	-6051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCACGCTGCCGGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	79984537	79981418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79981602_79982724_79982897_79983767_79983939_79984442
ENSMUSG00000030533.17_79981585_79986110_1	chr7	-	586	5	ISM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	3857	6542	3857	-6217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGCTGGCCGGGAAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	79986110	79981584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053
ENSMUSG00000030533.17_79982838_79986702_1	chr7	-	597	5	ISM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	3265	7795	3265	-7470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACGGCAAACAGCCGCAT	NA	NA	NA	NA	NA	NA	NA	NA	79986702	79982837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672
ENSMUSG00000030533.17_79984571_79989361_1	chr7	-	578	6	ISM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	606	9528	606	-9203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATCCTGGGTGTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	79989361	79984570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298
ENSMUSG00000030533.17_79986154_79990158_1	chr7	-	595	6	ISM	ENSMUSG00000030533.17	ENST00000639885.1	3170	21	741	10786	-191	-10786	internal_fragment	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCAGCTCTTGCAGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	79990158	79986153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79990099
ENSMUSG00000030533.17_79988573_79990697_1	chr7	-	575	5	ISM	ENSMUSG00000030533.17	ENST00000639885.1	3170	21	202	13205	202	-13205	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGTTGGAGTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	79990697	79988572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79988765_79989061_79989099_79989298_79989461_79990099_79990266_79990679
ENSMUSG00000030533.17_79988573_79990756_1	chr7	-	634	5	ISM	ENSMUSG00000030533.17	ENST00000639885.1	3170	21	143	13205	143	-13205	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGTTGGAGTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	79990756	79988572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79988765_79989061_79989099_79989298_79989461_79990099_79990266_79990679
ENSMUSG00000030533.17_79988697_79990832_1	chr7	-	586	5	ISM	ENSMUSG00000030533.17	ENST00000639885.1	3170	21	67	13329	67	-13329	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGGACCAGGCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	79990832	79988696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79988765_79989061_79989099_79989298_79989461_79990099_79990266_79990679
ENSMUSG00000030534.14_79919488_79941023_1	chr7	+	2179	23	FSM	ENSMUSG00000030534.14	ENSMUST00000032749.12	2574	23	91	304	91	-304	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGTCACACACACACACA	NA	NA	NA	NA	NA	NA	NA	NA	79919487	79941023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ENSMUSG00000030534.14_79924042_79941327_1	chr7	+	2078	22	ISM	ENSMUSG00000030534.14	ENSMUST00000032749.12	2574	23	4645	0	4645	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTTTTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	79924041	79941327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ENSMUSG00000030536.11_80362681_80366831_1	chr7	-	1086	2	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	86333	1350	86333	-1350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTTGATTTTAGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	80366831	80362680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80363694_80366758
ENSMUSG00000030536.11_80362786_80370690_1	chr7	-	1091	3	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	82474	1455	82474	-1455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGAAAGGGTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80370690	80362785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80363694_80366758_80366868_80370616
ENSMUSG00000030536.11_80362939_80372807_1	chr7	-	1085	4	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	80357	1608	80357	-1608	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACCATCCCTTCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	80372807	80362938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709
ENSMUSG00000030536.11_80363086_80373627_1	chr7	-	1108	5	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	79537	1755	79537	-1755	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCAAATGAAGCAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	80373627	80363085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526
ENSMUSG00000030536.11_80363141_80373693_1	chr7	-	1119	5	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	79471	1810	79471	-1810	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTTCCGGCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	80373693	80363140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526
ENSMUSG00000030536.11_80363608_80377752_1	chr7	-	1077	9	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	75412	2277	75412	-2277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAACAAAAAGTTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	80377752	80363607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700
ENSMUSG00000030536.11_80366813_80378657_1	chr7	-	1079	9	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	74507	5482	74507	-5482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAGCCAAGTTCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	80378657	80366812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596
ENSMUSG00000030536.11_80372752_80379879_1	chr7	-	1094	8	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	73285	11421	73285	-11421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACATCAAAACCTGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	80379879	80372751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816
ENSMUSG00000030536.11_80373664_80383820_1	chr7	-	1082	9	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	69344	12333	69344	-12333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCATGAAGGAGGATAAC	NA	NA	NA	NA	NA	NA	NA	NA	80383820	80373663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733
ENSMUSG00000030536.11_80375784_80385311_1	chr7	-	1076	8	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	67853	14453	67853	-14453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTGACCAACAAGTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	80385311	80375783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221
ENSMUSG00000030536.11_80377703_80386076_1	chr7	-	1046	7	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	67088	16372	67088	-16372	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAAGTGCTTCCCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	80386076	80377702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009
ENSMUSG00000030536.11_80378617_80387975_1	chr7	-	1098	7	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	65189	17286	65189	-17286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCCTACCAGAAATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	80387975	80378616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861
ENSMUSG00000030536.11_80380061_80389617_1	chr7	-	1130	9	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	63547	18730	63547	-18730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATCAGGAACATGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	80389617	80380060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537
ENSMUSG00000030536.11_80383843_80392855_1	chr7	-	1114	9	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	60309	22512	60309	-22512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCGTGAAGGAAATTATG	NA	NA	NA	NA	NA	NA	NA	NA	80392855	80383842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783
ENSMUSG00000030536.11_80385320_80393665_1	chr7	-	1096	9	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	59499	23989	59499	-23989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGTGATCTTCACGCT	NA	NA	NA	NA	NA	NA	NA	NA	80393665	80385319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540
ENSMUSG00000030536.11_80386061_80393941_1	chr7	-	1098	9	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	59223	24730	59223	-24730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGAGGGAGAAGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80393941	80386060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865
ENSMUSG00000030536.11_80387998_80401160_1	chr7	-	1123	10	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	52004	26667	52004	-26667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGGAACTTGATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	80401160	80387997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073
ENSMUSG00000030536.11_80388743_80401777_1	chr7	-	1107	8	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	51387	27412	51387	-27412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTAGCCCAGCAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	80401777	80388742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616
ENSMUSG00000030536.11_80389570_80402048_1	chr7	-	1102	8	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	51116	28239	51116	-28239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACAGATCCCTGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	80402048	80389569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937
ENSMUSG00000030536.11_80389633_80402094_1	chr7	-	1085	8	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	51070	28302	51070	-28302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGCCTGCTGCCGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	80402094	80389632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937
ENSMUSG00000030536.11_80392877_80407234_1	chr7	-	1091	9	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	45930	31546	45930	-31546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTACCACAACCTGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	80407234	80392876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151
ENSMUSG00000030536.11_80393920_80409602_1	chr7	-	1082	9	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	43562	32589	43562	-32589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCAAGGTGGAATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	80409602	80393919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505
ENSMUSG00000030536.11_80398674_80410636_1	chr7	-	1099	9	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	42528	37343	42528	-37343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCCTGCAGATCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	80410636	80398673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562
ENSMUSG00000030536.11_80401593_80415119_1	chr7	-	1121	9	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	38045	40262	38045	-40262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGACCTCTCATGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	80415119	80401592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042
ENSMUSG00000030536.11_80401980_80418191_1	chr7	-	1107	10	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	34973	40649	34973	-40649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGAAGGAGTTGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	80418191	80401979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056
ENSMUSG00000030536.11_80405927_80449697_1	chr7	-	1108	10	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	3467	44596	3467	-44596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGACCCTTAGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	80449697	80405926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597
ENSMUSG00000030536.11_80407152_80453011_1	chr7	-	1145	10	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	153	45821	153	-45821	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCATGCGGGTGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	80453011	80407151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ENSMUSG00000030536.11_80407227_80453051_1	chr7	-	1110	10	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	113	45896	113	-45896	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGAGGGCTGCAGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	80453051	80407226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ENSMUSG00000030536.11_80407922_80453164_1	chr7	-	1134	9	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	0	46591	0	-46591	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATTGCCCCAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	80453164	80407921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ENSMUSG00000030538.16_79876895_79882553_3	chr7	-	1022	6	NNC	ENSMUSG00000030538.16	novel	1047	7	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGTAGCAGCAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	79882553	79876894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880191_79882257
ENSMUSG00000030538.16_79876895_79882553_4	chr7	-	1032	7	NNC	ENSMUSG00000030538.16	novel	1047	7	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGTAGCAGCAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	79882553	79876894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091_79882127_79882264
ENSMUSG00000030538.16_79876895_79882553_5	chr7	-	1019	6	NNC	ENSMUSG00000030538.16	novel	1047	7	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGTAGCAGCAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	79882553	79876894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882242
ENSMUSG00000030539.14_79848284_79875423_1	chr7	+	2929	14	FSM	ENSMUSG00000030539.14	ENSMUST00000205822.2	3760	14	95	736	95	-736	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGGCTTTGTGAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	79848283	79875423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
ENSMUSG00000030539.14_79848284_79875495_1	chr7	+	3001	14	FSM	ENSMUSG00000030539.14	ENSMUST00000205822.2	3760	14	95	664	95	-664	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTGAGGCTACCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	79848283	79875495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
ENSMUSG00000030539.14_79848284_79875554_1	chr7	+	3060	14	FSM	ENSMUSG00000030539.14	ENSMUST00000205822.2	3760	14	95	605	95	-605	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGGACATATCTGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	79848283	79875554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
ENSMUSG00000030539.14_79862649_79875767_1	chr7	+	2933	13	ISM	ENSMUSG00000030539.14	ENSMUST00000205822.2	3760	14	14460	392	14460	-392	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCCCTACCCATCGACG	NA	NA	NA	NA	NA	NA	NA	NA	79862648	79875767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
ENSMUSG00000030539.14_79865390_79875913_1	chr7	+	2939	11	ISM	ENSMUSG00000030539.14	ENSMUST00000205822.2	3760	14	17201	246	17201	-246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCAAGTGCTGGGATTA	NA	NA	NA	NA	NA	NA	NA	NA	79865389	79875913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
ENSMUSG00000030539.14_79866477_79876160_1	chr7	+	2994	9	ISM	ENSMUSG00000030539.14	ENSMUST00000205822.2	3760	14	18288	-1	18288	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTGAAGGGCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	79866476	79876160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
ENSMUSG00000030541.17_79744598_79745464_1	chr7	-	450	2	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	19676	4	19588	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTGATGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	79745464	79744597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79744952_79745368
ENSMUSG00000030541.17_79744807_79747582_1	chr7	-	480	5	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	17558	213	17470	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCCTCTCTGGTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	79747582	79744806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551
ENSMUSG00000030541.17_79744935_79747680_1	chr7	-	450	5	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	17460	341	17372	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCCTGAACACCACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	79747680	79744934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551
ENSMUSG00000030541.17_79745412_79747944_1	chr7	-	474	5	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	17196	818	17108	-605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGACCAAGGACCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	79747944	79745411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883
ENSMUSG00000030541.17_79745776_79748591_1	chr7	-	470	4	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	16549	1182	16461	-969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTAAATGTGTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	79748591	79745775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79745884_79747551_79747704_79747883_79748021_79748518
ENSMUSG00000030541.17_79747577_79748768_1	chr7	-	431	4	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	16372	2983	16284	-2770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGTCTGACATCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	79748768	79747576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79747704_79747883_79748021_79748518_79748663_79748745
ENSMUSG00000030541.17_79747622_79748887_1	chr7	-	505	4	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	16253	3028	16165	-2815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCGGTGGCTTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	79748887	79747621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79747704_79747883_79748021_79748518_79748663_79748745
ENSMUSG00000030541.17_79747680_79748887_1	chr7	-	447	4	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	16253	3086	16165	-2873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAGATCTGGTATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	79748887	79747679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79747704_79747883_79748021_79748518_79748663_79748745
ENSMUSG00000030541.17_79748611_79752911_1	chr7	-	421	4	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	12229	4017	12141	-3804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCCAAAGGATGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	79752911	79748610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79748663_79748745_79748907_79750490_79750657_79752869
ENSMUSG00000030541.17_79748847_79765052_1	chr7	-	461	4	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	88	4253	0	-4040	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCGTCTTCAGAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	79765052	79748846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79748907_79750490_79750657_79752869_79752962_79764909
ENSMUSG00000030545.10_79386998_79392828_1	chr7	-	832	2	FSM	ENSMUSG00000030545.10	ENST00000559170.1	784	2	29	-77	0	77	multi-exon	TRUE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGTGAGCACCTTACC	NA	NA	NA	NA	NA	NA	NA	NA	79392828	79386997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_79387659_79392657
ENSMUSG00000030549.7_79244529_79250406_1	chr7	-	778	6	ISM	ENSMUSG00000030549.7	ENST00000268122.9	1456	10	16871	0	16871	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTCATCTGTGGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	79250406	79244528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79244616_79248236_79248363_79248717_79248843_79249104_79249242_79249426_79249565_79250241
ENSMUSG00000030549.7_79248237_79251482_1	chr7	-	841	6	ISM	ENSMUSG00000030549.7	ENST00000268122.9	1456	10	15795	3708	15795	-3708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACATCGATGTAGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	79251482	79248236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79248363_79248717_79248843_79249104_79249242_79249426_79249565_79250241_79250409_79251334
ENSMUSG00000030549.7_79248343_79253556_1	chr7	-	804	7	ISM	ENSMUSG00000030549.7	ENST00000268122.9	1456	10	13721	3814	13721	-3814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGGGACAAGCTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	79253556	79248342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79248363_79248717_79248843_79249104_79249242_79249426_79249565_79250241_79250409_79251334_79251483_79253487
ENSMUSG00000030549.7_79248805_79257321_1	chr7	-	808	7	ISM	ENSMUSG00000030549.7	ENST00000268122.9	1456	10	9956	4276	9956	-4276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGGAACAAGAGAATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	79257321	79248804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79248843_79249104_79249242_79249426_79249565_79250241_79250409_79251334_79251483_79253487_79253639_79257292
ENSMUSG00000030549.7_79249431_79267142_1	chr7	-	842	6	ISM	ENSMUSG00000030549.7	ENST00000268122.9	1456	10	135	4902	135	-4902	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGTGAGGACCCTCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	79267142	79249430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79249565_79250241_79250409_79251334_79251483_79253487_79253639_79257292_79257480_79267087
ENSMUSG00000030549.7_79249502_79267175_1	chr7	-	804	6	ISM	ENSMUSG00000030549.7	ENST00000268122.9	1456	10	102	4973	102	-4973	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACACCTTACGGCGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	79267175	79249501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79249565_79250241_79250409_79251334_79251483_79253487_79253639_79257292_79257480_79267087
ENSMUSG00000030549.7_79249545_79267272_1	chr7	-	858	6	ISM	ENSMUSG00000030549.7	ENST00000268122.9	1456	10	5	5016	5	-5016	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCAGGTGGGGTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	79267272	79249544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79249565_79250241_79250409_79251334_79251483_79253487_79253639_79257292_79257480_79267087
ENSMUSG00000030551.15_70001692_70002863_1	chr7	-	1121	2	ISM	ENSMUSG00000030551.15	ENST00000394171.6	3507	4	6738	2	6094	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCCTGTTTTATTATGC	NA	NA	NA	NA	NA	NA	NA	NA	70002863	70001691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_70002315_70002365
ENSMUSG00000030551.15_70001894_70003100_1	chr7	-	1156	2	ISM	ENSMUSG00000030551.15	ENST00000394171.6	3507	4	6501	204	5857	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGACCTGTAGATGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	70003100	70001893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_70002315_70002365
ENSMUSG00000030551.15_70001948_70003152_1	chr7	-	1154	2	ISM	ENSMUSG00000030551.15	ENST00000394171.6	3507	4	6449	258	5805	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATATATAGATATATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	70003152	70001947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_70002315_70002365
ENSMUSG00000030551.15_70001979_70003176_1	chr7	-	1149	2	NNC	ENSMUSG00000030551.15	novel	3507	4	NA	NA	5781	-285	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTATCTGACCCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	70003176	70001978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_70002317_70002365
ENSMUSG00000030551.15_70002193_70003345_1	chr7	-	1104	2	NNC	ENSMUSG00000030551.15	novel	3507	4	NA	NA	5612	-499	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTGGGAACTTGCAATT	NA	NA	NA	NA	NA	NA	NA	NA	70003345	70002192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_70002317_70002365
ENSMUSG00000030551.15_70002224_70003430_1	chr7	-	1158	2	NNC	ENSMUSG00000030551.15	novel	3507	4	NA	NA	5527	-530	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTCTCTTTTCCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	70003430	70002223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_70002317_70002365
ENSMUSG00000030551.15_70004187_70009763_1	chr7	-	1149	3	FSM	ENSMUSG00000030551.15	ENSMUST00000032768.15	4222	3	578	2495	-162	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACTCCTGTGTTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	70009763	70004186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_70004680_70007510_70008039_70009635
ENSMUSG00000030551.15_70004383_70007628_1	chr7	-	415	2	ISM	ENSMUSG00000030551.15	ENST00000453270.2	1738	3	1329	193	1329	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGTGAAACAGAGAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	70007628	70004382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_70004680_70007510
ENSMUSG00000030551.15_70004538_70010105_1	chr7	-	1140	3	FSM	ENSMUSG00000030551.15	ENSMUST00000032768.15	4222	3	236	2846	236	-348	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTCTCCTCCTCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	70010105	70004537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_70004680_70007510_70008039_70009635
ENSMUSG00000030551.15_70004581_70010188_1	chr7	-	1180	3	FSM	ENSMUSG00000030551.15	ENSMUST00000032768.15	4222	3	153	2889	153	-391	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACACGGTTCGGAAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	70010188	70004580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_70004680_70007510_70008039_70009635
ENSMUSG00000030551.15_70007724_70010467_1	chr7	-	1147	2	ISM	ENSMUSG00000030551.15	ENSMUST00000032768.15	4222	3	-126	6032	-126	-3534	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTTGAATGCGGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	70010467	70007723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_70008039_70009635
ENSMUSG00000030551.15_70007811_70008405_1	chr7	-	396	2	ISM	ENSMUSG00000030551.15	ENST00000453270.2	1738	3	552	3621	552	-3621	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTGGGCCCGGAACATC	NA	NA	NA	NA	NA	NA	NA	NA	70008405	70007810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_70008039_70008237
ENSMUSG00000030551.15_70007811_70008415_1	chr7	-	410	2	NNC	ENSMUSG00000030551.15	novel	1738	3	NA	NA	542	-3621	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTGGGCCCGGAACATC	NA	NA	NA	NA	NA	NA	NA	NA	70008415	70007810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_70008039_70008233
ENSMUSG00000030551.15_70007915_70008514_1	chr7	-	401	2	ISM	ENSMUSG00000030551.15	ENST00000453270.2	1738	3	443	3725	443	-3725	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTACCCCACGTCGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	70008514	70007914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_70008039_70008237
ENSMUSG00000030555.17_67297031_67317035_1	chr7	+	755	4	ISM	ENSMUSG00000030555.17	ENST00000394129.6	1625	10	5	44243	5	-44194	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTCCCGGGCACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	67297030	67317035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_67297199_67305055_67305318_67312074_67312275_67316910
ENSMUSG00000030555.17_67297031_67361230_1	chr7	+	1267	9	FSM	ENSMUSG00000030555.17	ENST00000558663.5	1271	9	5	-1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGTACGCGAAGCTAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	67297030	67361230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_67297156_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101
ENSMUSG00000030555.17_67297455_67375831_1	chr7	+	1441	11	FSM	ENSMUSG00000030555.17	ENSMUST00000107471.8	2216	11	282	493	282	-490	multi-exon	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCAGTGCCCCCCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	67297454	67375831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_67297594_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
ENSMUSG00000030555.17_67297499_67375891_1	chr7	+	1457	11	FSM	ENSMUSG00000030555.17	ENSMUST00000107471.8	2216	11	326	433	326	-430	multi-exon	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCATGTGCCGCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	67297498	67375891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_67297594_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
ENSMUSG00000030555.17_67305056_67319596_1	chr7	+	737	4	ISM	ENSMUSG00000030555.17	ENST00000394129.6	1625	10	8030	41682	-139	-41633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCTTTCCCTCTAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	67305055	67319596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_67305318_67312074_67312275_67316910_67317035_67319445
ENSMUSG00000030555.17_67305195_67328673_1	chr7	+	756	6	ISM	ENSMUSG00000030555.17	ENST00000394129.6	1625	10	8169	32605	0	-32556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCCGTTCTATCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	67305194	67328673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_67305318_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641
ENSMUSG00000030555.17_67312175_67376061_1	chr7	+	1432	10	ISM	ENSMUSG00000030555.17	ENSMUST00000107470.2	1915	11	6980	260	6980	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAATGCCCTTTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	67312174	67376061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
ENSMUSG00000030555.17_67316934_67376209_1	chr7	+	1457	9	ISM	ENSMUSG00000030555.17	ENSMUST00000107470.2	1915	11	11739	112	11739	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCTCCATCCAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	67316933	67376209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
ENSMUSG00000030556.14_67163855_67179461_1	chr7	-	1200	2	ISM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	115518	697	115494	-697	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGGTGTTCGTTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	67179461	67163854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_67164927_67179333
ENSMUSG00000030556.14_67164013_67181516_1	chr7	-	1228	3	ISM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	113463	855	113439	-855	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGACTTCTCCCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	67181516	67164012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_67164927_67179333_67179494_67181362
ENSMUSG00000030556.14_67164255_67209696_1	chr7	-	1202	5	ISM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	85283	1097	85259	-1097	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTTATTTCTAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	67209696	67164254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605
ENSMUSG00000030556.14_67164452_67267819_1	chr7	-	1200	6	ISM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	27160	1294	27136	-1294	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTCCCCCAGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	67267819	67164451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740
ENSMUSG00000030556.14_67164670_67290913_1	chr7	-	1182	9	ISM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	4066	1512	4042	-1512	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTTCGCTTTTCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	67290913	67164669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67278042_67278084_67290851
ENSMUSG00000030557.18_66883955_66915910_1	chr7	-	1768	7	ISM	ENSMUSG00000030557.18	ENST00000558812.5	2174	10	106731	-98	106679	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAATAGAAAACACGCA	NA	NA	NA	NA	NA	NA	NA	NA	66915910	66883954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_66884977_66886271_66886399_66890061_66890189_66894268_66894293_66901404_66901593_66914612_66914673_66915690
ENSMUSG00000030557.18_66883955_66917898_1	chr7	-	1828	7	ISM	ENSMUSG00000030557.18	ENSMUST00000032776.15	2476	11	104708	0	104691	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAATAGAAAACACGCA	NA	NA	NA	NA	NA	NA	NA	NA	66917898	66883954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814
ENSMUSG00000030557.18_66884203_66945238_1	chr7	-	1750	8	ISM	ENSMUSG00000030557.18	ENSMUST00000032776.15	2476	11	77368	248	77351	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTCAGAAAACAAAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	66945238	66884202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122
ENSMUSG00000030557.18_66884369_66966731_2	chr7	-	1678	9	ISM	ENSMUSG00000030557.18	ENST00000558812.5	2174	10	55910	316	55858	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACCCTGTAGAAACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	66966731	66884368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_66884977_66886271_66886399_66890061_66890189_66894268_66894293_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66966539
ENSMUSG00000030557.18_66884445_66966686_1	chr7	-	1743	9	ISM	ENSMUSG00000030557.18	ENSMUST00000032776.15	2476	11	55920	490	55903	-392	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTTGCATACACAAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	66966686	66884444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539
ENSMUSG00000030557.18_66884512_67022575_1	chr7	-	1649	10	FSM	ENSMUSG00000030557.18	ENST00000558812.5	2174	10	66	459	14	-459	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACATATATATCCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	67022575	66884511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66894268_66894293_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66966539_66966731_67022460
ENSMUSG00000030557.18_66884561_67022590_1	chr7	-	1615	10	FSM	ENSMUSG00000030557.18	ENST00000558812.5	2174	10	51	508	-1	-508	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAATTGGTGAATAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	67022590	66884560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66894268_66894293_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66966539_66966731_67022460
ENSMUSG00000030557.18_66884624_67022638_1	chr7	-	1600	10	FSM	ENSMUSG00000030557.18	ENST00000558812.5	2174	10	3	571	3	-571	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTAAGGCTTCCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	67022638	66884623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66894268_66894293_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66966539_66966731_67022460
ENSMUSG00000030557.18_66884625_67022575_1	chr7	-	1795	11	FSM	ENSMUSG00000030557.18	ENSMUST00000076325.12	2664	11	31	838	14	-572	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCTAAGGCTTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	67022575	66884624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999596_66999670_67022460
ENSMUSG00000030557.18_66884695_66918097_1	chr7	-	1085	7	ISM	ENSMUSG00000030557.18	ENST00000557785.5	2842	11	104492	1109	104492	-642	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGCCGACCTCCAAATA	NA	NA	NA	NA	NA	NA	NA	NA	66918097	66884694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016
ENSMUSG00000030557.18_66884863_66945196_1	chr7	-	1042	8	ISM	ENSMUSG00000030557.18	ENST00000557785.5	2842	11	77393	1277	77393	-810	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAGCAGCAGCAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	66945196	66884862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122
ENSMUSG00000030557.18_66884917_66945255_1	chr7	-	1047	8	ISM	ENSMUSG00000030557.18	ENST00000557785.5	2842	11	77334	1331	77334	-864	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGTCAGAGCCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	66945255	66884916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122
ENSMUSG00000030557.18_66886285_66966668_1	chr7	-	1174	8	ISM	ENSMUSG00000030557.18	ENST00000557785.5	2842	11	55921	2699	55921	-2232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTCTGGTGTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	66966668	66886284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539
ENSMUSG00000030557.18_66901405_66999669_1	chr7	-	1068	7	ISM	ENSMUSG00000030557.18	ENST00000557785.5	2842	11	22920	17819	22920	-17352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGACCCACTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	66999669	66901404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999596
ENSMUSG00000030557.18_66945259_67022575_1	chr7	-	374	3	ISM	ENSMUSG00000030557.18	ENST00000338042.10	5428	10	66	64280	14	-61206	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATAGCACTCATCATTT	NA	NA	NA	NA	NA	NA	NA	NA	67022575	66945258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_66945327_66966539_66966731_67022460
ENSMUSG00000030557.18_66945306_67022616_1	chr7	-	368	3	ISM	ENSMUSG00000030557.18	ENST00000338042.10	5428	10	25	64327	-10	-61253	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTGATGAAGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	67022616	66945305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_66945327_66966539_66966731_67022460
ENSMUSG00000030560.18_87930686_87948692_1	chr7	+	262	3	ISM	ENSMUSG00000030560.18	ENST00000678915.1	1101	5	84	10441	84	8087	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCCATCAATACCGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	87930685	87948692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_87930741_87946290_87946458_87948652
ENSMUSG00000030560.18_87951391_87958785_1	chr7	+	296	2	ISM	ENSMUSG00000030560.18	ENST00000678915.1	1101	5	20789	348	20789	-348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCCCTGATGAAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	87951390	87958785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_87951509_87958607
ENSMUSG00000030562.18_86896003_87023630_1	chr7	+	1181	12	ISM	ENSMUSG00000030562.18	ENST00000527626.5	1729	14	22	22773	0	-21441	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGGCTGGATGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	86896002	87023630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_86896111_86896695_86896792_86963271_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86973140_86973204_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021173_87023561
ENSMUSG00000030562.18_86896695_87025491_1	chr7	+	1176	12	ISM	ENSMUSG00000030562.18	ENST00000527626.5	1729	14	714	20912	692	-19580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAATGTTCCTCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	86896694	87025491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_86896792_86963271_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86973140_86973204_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021173_87023561_87023631_87025389
ENSMUSG00000030562.18_86963282_87046021_1	chr7	+	1111	12	ISM	ENSMUSG00000030562.18	ENST00000527626.5	1729	14	67301	382	67279	-382	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCTTCATAGTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	86963281	87046021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86973140_86973204_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021173_87023561_87023631_87025389_87025491_87045978
ENSMUSG00000030562.18_86972839_87046403_1	chr7	+	1134	9	ISM	ENSMUSG00000030562.18	ENST00000527626.5	1729	14	76858	0	76836	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTACACTGAAGCTGATA	NA	NA	NA	NA	NA	NA	NA	NA	86972838	87046403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_86973006_86973140_86973204_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021173_87023561_87023631_87025389_87025491_87045978
ENSMUSG00000030583.17_29019803_29066133_1	chr7	-	2130	13	ISM	ENSMUSG00000030583.17	ENST00000222345.11	5848	22	151907	3	1110	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGGTGTGTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	29066133	29019802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29019821_29021568_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030970_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975
ENSMUSG00000030583.17_29021547_29066227_1	chr7	-	2225	12	ISM	ENSMUSG00000030583.17	ENSMUST00000182484.2	2420	13	1016	0	1016	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCTGGCTGGCAGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	29066227	29021546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030967_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975
ENSMUSG00000030583.17_29023627_29070504_1	chr7	-	2145	12	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	134381	3824	-3261	-2080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAAGCAGCTGCACACG	NA	NA	NA	NA	NA	NA	NA	NA	29070504	29023626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29023677_29025187_29025324_29028409_29028554_29030722_29030970_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389
ENSMUSG00000030583.17_29028442_29077030_1	chr7	-	2197	11	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	127855	8639	-9787	-6895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGGTGAATGCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	29077030	29028441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29028554_29030722_29030970_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920
ENSMUSG00000030583.17_29028498_29077030_1	chr7	-	2141	11	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	127855	8695	-9787	-6951	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTTGACCCCGGGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	29077030	29028497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29028554_29030722_29030970_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920
ENSMUSG00000030583.17_29030723_29077170_1	chr7	-	2225	10	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	127715	10920	-9927	-9176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCTGGACATCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	29077170	29030722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29030970_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920
ENSMUSG00000030583.17_29031650_29077284_1	chr7	-	2092	9	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	127601	11847	-10041	-10103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGCGTGCGGCTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	29077284	29031649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920
ENSMUSG00000030583.17_29038425_29082677_1	chr7	-	2152	9	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	122208	18622	-15434	-16878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGAGCCCCCACCACGGCC	NA	NA	NA	NA	NA	NA	NA	NA	29082677	29038424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620
ENSMUSG00000030583.17_29038501_29082737_1	chr7	-	2136	9	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	122148	18698	-15494	-16954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACCTCCGTCCCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	29082737	29038500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620
ENSMUSG00000030583.17_29047697_29085584_1	chr7	-	2179	9	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	119301	27894	-18341	-26150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAACCCACACCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	29085584	29047696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480
ENSMUSG00000030583.17_29047871_29086709_1	chr7	-	2137	10	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	118176	28068	-19466	-26324	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGGCCGAGAGTCGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	29086709	29047870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577
ENSMUSG00000030583.17_29048086_29087569_1	chr7	-	2147	11	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	117316	28283	-20326	-26539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCCAGCAACGCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	29087569	29048085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387
ENSMUSG00000030583.17_29063643_29098939_1	chr7	-	2140	10	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	105946	43840	-31696	-42096	internal_fragment	TRUE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAGGCTCTGCCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	29098939	29063642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751
ENSMUSG00000030583.17_29066129_29099160_1	chr7	-	2117	9	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	105725	46326	-31917	-44582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCAGTGGAGTGGGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	29099160	29066128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751
ENSMUSG00000030583.17_29066129_29099219_1	chr7	-	2176	9	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	105666	46326	-31976	-44582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCAGTGGAGTGGGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	29099219	29066128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751
ENSMUSG00000030583.17_29070542_29099429_1	chr7	-	2135	8	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	105456	50739	-32186	-48995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGCCTCCGGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	29099429	29070541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751
ENSMUSG00000030583.17_29077197_29099852_1	chr7	-	2159	7	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	105033	57394	-32609	-55650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACAGTGCTGGGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	29099852	29077196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751
ENSMUSG00000030583.17_29077271_29099918_1	chr7	-	2151	7	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	104967	57468	-32675	-55724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCGGCAAGTTCAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	29099918	29077270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751
ENSMUSG00000030583.17_29082621_29100109_1	chr7	-	2115	6	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	104776	62818	-32866	-61074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGGCTGCCAGCATCCCG	NA	NA	NA	NA	NA	NA	NA	NA	29100109	29082620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751
ENSMUSG00000030583.17_29082649_29100194_1	chr7	-	2172	6	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	104691	62846	-32951	-61102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTGCACTGAGAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	29100194	29082648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751
ENSMUSG00000030583.17_29082715_29100229_1	chr7	-	2141	6	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	104656	62912	-32986	-61168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTTCACCCCTAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	29100229	29082714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751
ENSMUSG00000030583.17_29086615_29100452_1	chr7	-	2159	4	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	104433	66812	-33209	-65068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTCACCAAGTATGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	29100452	29086614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29086753_29087387_29087577_29096575_29096707_29098751
ENSMUSG00000030583.17_29087452_29217985_1	chr7	-	2213	4	ISM	ENSMUSG00000030583.17	ENST00000222345.11	5848	22	55	67652	55	-65905	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTCTGGCTCTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	29217985	29087451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29087577_29096575_29096707_29098751_29100575_29217851
ENSMUSG00000030583.17_29087506_29217985_1	chr7	-	2159	4	ISM	ENSMUSG00000030583.17	ENST00000222345.11	5848	22	55	67706	55	-65959	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACCCCTGAAGGATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	29217985	29087505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29087577_29096575_29096707_29098751_29100575_29217851
ENSMUSG00000030583.17_29087562_29218040_1	chr7	-	2158	4	ISM	ENSMUSG00000030583.17	ENST00000222345.11	5848	22	0	67762	0	-66015	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCATTCTCGAGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	29218040	29087561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29087577_29096575_29096707_29098751_29100575_29217851
ENSMUSG00000030584.15_29008636_29012576_1	chr7	+	708	7	ISM	ENSMUSG00000030584.15	ENST00000414789.5	1735	12	183	3745	183	-3745	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGGGAGGAGCACACTG	NA	NA	NA	NA	NA	NA	NA	NA	29008635	29012576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_29008708_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506
ENSMUSG00000030584.15_29008834_29013614_1	chr7	+	751	7	ISM	ENSMUSG00000030584.15	ENST00000414789.5	1735	12	381	2707	381	-2707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGGCACCTCCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	29008833	29013614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563
ENSMUSG00000030584.15_29008938_29013764_1	chr7	+	704	8	ISM	ENSMUSG00000030584.15	ENST00000414789.5	1735	12	485	2557	485	-2557	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCTCCAAGAAGACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	29008937	29013764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707
ENSMUSG00000030584.15_29010749_29015750_1	chr7	+	736	8	ISM	ENSMUSG00000030584.15	ENST00000414789.5	1735	12	2296	571	2296	-571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGAAGGGGTGGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	29010748	29015750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668
ENSMUSG00000030584.15_29011078_29015988_1	chr7	+	704	8	ISM	ENSMUSG00000030584.15	ENST00000414789.5	1735	12	2625	333	2625	-333	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCAGGATCTTTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	29011077	29015988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
ENSMUSG00000030584.15_29013568_29016313_1	chr7	+	770	5	ISM	ENSMUSG00000030584.15	ENST00000414789.5	1735	12	5115	8	5115	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGGGAAAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	29013567	29016313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
ENSMUSG00000030588.13_28937838_28946691_1	chr7	+	788	8	FSM	ENSMUSG00000030588.13	ENSMUST00000032809.10	1111	8	60	263	26	-128	multi-exon	FALSE	canonical	NA	NA	NA	NA	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCAGCGGCCGAAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	28937837	28946691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_28937871_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUSG00000030588.13_28943495_28946819_1	chr7	+	883	7	ISM	ENSMUSG00000030588.13	ENSMUST00000032809.10	1111	8	5717	135	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCTGGCCTCCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	28943494	28946819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUSG00000030588.13_28943632_28946791_1	chr7	+	613	6	FSM	ENSMUSG00000030588.13	ENST00000592246.5	778	6	137	28	137	-28	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCACCTTCCACCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	28943631	28946791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_28943728_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUSG00000030588.13_28943655_28945204_1	chr7	+	429	5	ISM	ENSMUSG00000030588.13	ENST00000337679.12	1011	8	5843	1615	160	-1615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATTGACCTGGTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	28943654	28945204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090
ENSMUSG00000030588.13_28943824_28946954_1	chr7	+	785	6	ISM	ENSMUSG00000030588.13	ENSMUST00000032809.10	1111	8	6046	0	329	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	28943823	28946954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUSG00000030588.13_28945088_28946681_1	chr7	+	351	3	ISM	ENSMUSG00000030588.13	ENST00000337679.12	1011	8	7276	138	1593	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGGCCCAGGCAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	28945087	28946681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28945247_28945325_28945498_28946661
ENSMUSG00000030588.13_28945170_28946722_1	chr7	+	310	3	ISM	ENSMUSG00000030588.13	ENST00000337679.12	1011	8	7358	97	1675	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGCGGAACCAGCTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	28945169	28946722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28945247_28945325_28945498_28946661
ENSMUSG00000030588.13_28945224_28946775_1	chr7	+	309	3	ISM	ENSMUSG00000030588.13	ENST00000337679.12	1011	8	7412	44	1729	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTACTCATGTACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	28945223	28946775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28945247_28945325_28945498_28946661
ENSMUSG00000030602.14_28258244_28262092_1	chr7	-	1286	5	NNC	ENSMUSG00000030602.14	novel	2527	9	NA	NA	5570	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATGTGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	28262092	28258243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_28258633_28258722_28259231_28259569_28259705_28260223_28260344_28261958
ENSMUSG00000030602.14_28258244_28267672_1	chr7	-	2525	9	NNC	ENSMUSG00000030602.14	novel	2527	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3076	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATGTGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	28267672	28258243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_28258633_28258730_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458
ENSMUSG00000030602.14_28258244_28267672_2	chr7	-	2527	9	NNC	ENSMUSG00000030602.14	novel	2527	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATGTGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	28267672	28258243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_28258633_28258728_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458
ENSMUSG00000030602.14_28258244_28267672_3	chr7	-	2533	9	FSM	ENSMUSG00000030602.14	ENST00000358301.7	2527	9	0	-6	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATGTGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	28267672	28258243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28258633_28258722_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458
ENSMUSG00000030603.17_27741182_27746471_1	chr7	-	695	6	ISM	ENSMUSG00000030603.17	ENSMUST00000140053.3	1244	11	3002	0	3002	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGGATTGGTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	27746471	27741181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410
ENSMUSG00000030603.17_27741312_27746649_1	chr7	-	650	7	ISM	ENSMUSG00000030603.17	ENSMUST00000140053.3	1244	11	2824	130	2824	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCCTGGCCAAGGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	27746649	27741311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597
ENSMUSG00000030603.17_27741855_27746877_1	chr7	-	614	6	ISM	ENSMUSG00000030603.17	ENSMUST00000140053.3	1244	11	2596	673	2596	-673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCACTCCCTGACCGTCG	NA	NA	NA	NA	NA	NA	NA	NA	27746877	27741854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790
ENSMUSG00000030603.17_27741896_27748256_1	chr7	-	672	7	ISM	ENSMUSG00000030603.17	ENSMUST00000140053.3	1244	11	1217	714	1217	-714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCTACTGCGGCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	27748256	27741895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217
ENSMUSG00000030603.17_27742113_27748291_1	chr7	-	632	6	ISM	ENSMUSG00000030603.17	ENSMUST00000140053.3	1244	11	1182	931	1182	-931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATGGATGGATTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	27748291	27742112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217
ENSMUSG00000030603.17_27742132_27748376_1	chr7	-	698	6	ISM	ENSMUSG00000030603.17	ENSMUST00000140053.3	1244	11	1097	950	1097	-950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGCTGGAACTACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	27748376	27742131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217
ENSMUSG00000030603.17_27742230_27748404_1	chr7	-	710	5	ISM	ENSMUSG00000030603.17	ENSMUST00000140053.3	1244	11	1069	1048	1069	-1048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGCCCAAATGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	27748404	27742229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217
ENSMUSG00000030603.17_27742341_27748582_1	chr7	-	653	6	ISM	ENSMUSG00000030603.17	ENSMUST00000032824.10	1440	11	944	1209	891	-1159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCCGGGATGTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	27748582	27742340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528
ENSMUSG00000030603.17_27746411_27749473_1	chr7	-	703	6	ISM	ENSMUSG00000030603.17	ENSMUST00000032824.10	1440	11	53	5279	0	-5229	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCTCTCACGGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	27749473	27746410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ENSMUSG00000030605.16_78783516_78784555_1	chr7	-	935	2	ISM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	14246	0	14246	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTGCCTCCTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	78784555	78783515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78784295_78784399
ENSMUSG00000030605.16_78783864_78791515_1	chr7	-	889	4	ISM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	7286	348	7286	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGTACCAACCACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	78791515	78783863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392
ENSMUSG00000030605.16_78784057_78792658_1	chr7	-	913	6	ISM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	6143	541	6143	-540	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTTCCCTTCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	78792658	78784056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616
ENSMUSG00000030605.16_78784114_78792798_1	chr7	-	996	6	ISM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	6003	598	6003	-597	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGGCCTCCTGGCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	78792798	78784113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616
ENSMUSG00000030605.16_78784244_78793064_1	chr7	-	905	7	ISM	ENSMUSG00000030605.16	ENSMUST00000032825.14	2125	10	5744	727	5737	-727	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTCATGGCTCGCTA	NA	NA	NA	NA	NA	NA	NA	NA	78793064	78784243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025
ENSMUSG00000030605.16_78784440_78795013_1	chr7	-	905	7	ISM	ENSMUSG00000030605.16	ENSMUST00000032825.14	2125	10	3795	923	3788	-923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGGACTGTATATG	NA	NA	NA	NA	NA	NA	NA	NA	78795013	78784439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025_78793137_78794994
ENSMUSG00000030605.16_78784487_78795071_1	chr7	-	916	7	ISM	ENSMUSG00000030605.16	ENSMUST00000032825.14	2125	10	3737	970	3730	-970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATCCAGTATGTGGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	78795071	78784486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025_78793137_78794994
ENSMUSG00000030605.16_78786526_78798737_1	chr7	-	1005	8	ISM	ENSMUSG00000030605.16	ENSMUST00000032825.14	2125	10	71	3009	64	-3009	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCTACAAGACATGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	78798737	78786525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025_78793137_78794994_78795127_78795369_78795493_78798642
ENSMUSG00000030605.16_78792186_78795390_1	chr7	-	452	4	ISM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	3411	8670	3411	-8669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTTCATCCAGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	78795390	78792185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78792303_78792616_78792799_78794994_78795127_78795369
ENSMUSG00000030605.16_78792256_78795427_1	chr7	-	419	4	ISM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	3374	8740	3374	-8739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGCCGTGCCGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	78795427	78792255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78792303_78792616_78792799_78794994_78795127_78795369
ENSMUSG00000030609.19_78545757_78552578_1	chr7	+	493	2	ISM	ENSMUSG00000030609.19	ENSMUST00000107421.8	2007	4	75	5551	0	-5548	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGACCCTGGGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	78545756	78552578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_78545763_78552091
ENSMUSG00000030609.19_78552327_78556973_1	chr7	+	535	3	ISM	ENSMUSG00000030609.19	ENSMUST00000107423.2	2230	4	6570	1153	6570	-1153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGTGGCCAGCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	78552326	78556973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_78552579_78555590_78555792_78556891
ENSMUSG00000030609.19_78552452_78557113_1	chr7	+	550	3	ISM	ENSMUSG00000030609.19	ENSMUST00000107423.2	2230	4	6695	1013	6695	-1013	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGACAGGAGGGAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	78552451	78557113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_78552579_78555590_78555792_78556891
ENSMUSG00000030611.11_78432867_78442562_1	chr7	+	881	6	FSM	ENSMUSG00000030611.11	ENSMUST00000032840.5	1056	6	0	175	0	-175	multi-exon	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGGAAGCCGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	78432866	78442562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384_78440515_78441621_78441688_78442389
ENSMUSG00000030611.11_78433061_78442737_1	chr7	+	862	6	FSM	ENSMUSG00000030611.11	ENSMUST00000032840.5	1056	6	194	0	194	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	78433060	78442737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384_78440515_78441621_78441688_78442389
ENSMUSG00000030612.7_78424984_78431334_1	chr7	-	851	3	ISM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	1503	0	1503	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGACCTACTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	78431334	78424983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78425474_78430185_78430360_78431147
ENSMUSG00000030612.7_78425088_78432652_1	chr7	-	845	4	FSM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	185	104	185	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTTGTCCTTGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	78432652	78425087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_78425474_78430185_78430360_78431147_78431335_78432554
ENSMUSG00000030612.7_78425135_78432709_1	chr7	-	855	4	FSM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	128	151	128	-151	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAGACTCAATTCGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	78432709	78425134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_78425474_78430185_78430360_78431147_78431335_78432554
ENSMUSG00000030612.7_78425200_78432837_1	chr7	-	918	4	FSM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	0	216	0	-216	multi-exon	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCACACGAGCCAAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	78432837	78425199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_78425474_78430185_78430360_78431147_78431335_78432554
ENSMUSG00000030613.14_92210514_92231502_1	chr7	+	1439	9	FSM	ENSMUSG00000030613.14	ENSMUST00000032842.13	1596	9	157	0	157	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTGTAAATGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	92210513	92231502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
ENSMUSG00000030613.14_92216831_92236289_1	chr7	+	665	8	NNC	ENSMUSG00000030613.14	novel	568	6	NA	NA	0	4787	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1020	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATGGAAAGATTCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92216830	92236289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92224504_92224591_92227631_92227747_92228061_92228094_92236224
ENSMUSG00000030613.14_92216831_92236289_3	chr7	+	637	7	NNC	ENSMUSG00000030613.14	novel	568	6	NA	NA	0	4787	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATGGAAAGATTCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92216830	92236289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92224504_92224591_92227631_92227751_92236224
ENSMUSG00000030613.14_92216831_92236289_4	chr7	+	611	7	NNC	ENSMUSG00000030613.14	novel	568	6	NA	NA	0	4787	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATGGAAAGATTCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92216830	92236289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92224504_92224591_92227631_92227747_92236246
ENSMUSG00000030613.14_92216831_92236289_5	chr7	+	618	7	NNC	ENSMUSG00000030613.14	novel	568	6	NA	NA	0	4787	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATGGAAAGATTCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92216830	92236289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92224504_92224591_92227631_92227747_92236239
ENSMUSG00000030614.9_90117929_90118891_1	chr7	-	555	2	ISM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	6318	1283	6318	-1283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAGAAATGATCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	90118891	90117928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_90118370_90118777
ENSMUSG00000030614.9_90118079_90120066_1	chr7	-	497	3	ISM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	5143	1433	5143	-1433	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGACACTCAGTAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	90120066	90118078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_90118370_90118777_90118890_90119972
ENSMUSG00000030614.9_90118133_90120126_1	chr7	-	503	3	ISM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	5083	1487	5083	-1487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACGGACTTTGCCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	90120126	90118132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_90118370_90118777_90118890_90119972
ENSMUSG00000030614.9_90118253_90121893_1	chr7	-	511	4	ISM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	3316	1607	3316	-1607	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTGGCTTACATCATT	NA	NA	NA	NA	NA	NA	NA	NA	90121893	90118252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805
ENSMUSG00000030615.13_90099908_90106437_1	chr7	-	796	5	NNC	ENSMUSG00000030615.13	novel	799	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAACATTAAAATACTT	NA	NA	NA	NA	NA	NA	NA	NA	90106437	90099907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_90100144_90100750_90100866_90101914_90102109_90104631_90104721_90106275
ENSMUSG00000030615.13_90099908_90106437_2	chr7	-	793	5	NNC	ENSMUSG00000030615.13	novel	799	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAACATTAAAATACTT	NA	NA	NA	NA	NA	NA	NA	NA	90106437	90099907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_90100144_90100750_90100866_90101920_90102109_90104631_90104728_90106279
ENSMUSG00000030616.17_90036507_90041667_1	chr7	+	257	4	ISM	ENSMUSG00000030616.17	ENST00000533892.5	1290	11	64	17088	64	-17088	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGCTTTGAACCATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	90036506	90041667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_90036561_90036710_90036765_90038075_90038124_90041566
ENSMUSG00000030616.17_90036507_90050710_1	chr7	+	753	8	NNC	ENSMUSG00000030616.17	novel	1728	12	NA	NA	64	-8045	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAAACGTGGGATTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	90036506	90050710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_90036561_90036710_90036765_90038075_90038124_90041566_90041666_90044370_90044491_90045681_90045852_90048391_90048495_90050605
ENSMUSG00000030616.17_90036567_90059034_1	chr7	+	1572	9	FSM	ENSMUSG00000030616.17	ENST00000389958.7	1763	9	192	-1	124	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCACATGTTTCCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	90036566	90059034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_90036765_90044370_90044491_90045681_90045852_90048391_90048495_90050605_90050777_90052238_90052318_90056118_90056219_90057563_90057770_90058609
ENSMUSG00000030616.17_90036609_90059034_1	chr7	+	1530	9	FSM	ENSMUSG00000030616.17	ENST00000389958.7	1763	9	234	-1	166	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCACATGTTTCCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	90036608	90059034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_90036765_90044370_90044491_90045681_90045852_90048391_90048495_90050605_90050777_90052238_90052318_90056118_90056219_90057563_90057770_90058609
ENSMUSG00000030616.17_90036711_90045703_1	chr7	+	219	4	ISM	ENSMUSG00000030616.17	ENST00000533892.5	1290	11	268	13052	268	-13052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAGTGGAGACTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	90036710	90045703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_90036765_90038075_90038124_90041566_90041662_90045681
ENSMUSG00000030619.11_89603862_89626149_1	chr7	-	1387	11	ISM	ENSMUSG00000030619.11	ENSMUST00000238981.2	2060	12	4035	0	3674	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTAGAAAGCTATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	89626149	89603861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104
ENSMUSG00000030619.11_89603862_89626257_1	chr7	-	1495	11	ISM	ENSMUSG00000030619.11	ENSMUST00000238981.2	2060	12	3927	0	3566	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTAGAAAGCTATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	89626257	89603861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104
ENSMUSG00000030619.11_89603972_89617014_1	chr7	-	627	4	ISM	ENSMUSG00000030619.11	ENST00000528180.5	1733	10	13193	0	12809	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACTGCTTTTAATAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	89617014	89603971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89604272_89604738_89604813_89605462_89605622_89616920
ENSMUSG00000030619.11_89603972_89629763_1	chr7	-	1529	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	147	-173	60	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACTGCTTTTAATAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	89629763	89603971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUSG00000030619.11_89604145_89604814_1	chr7	-	526	2	ISM	ENSMUSG00000030619.11	ENST00000327320.8	1941	12	25009	202	25009	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATTTTTTCCTAGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	89604814	89604144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89604364_89604507
ENSMUSG00000030619.11_89604145_89619639_1	chr7	-	660	6	ISM	ENSMUSG00000030619.11	ENST00000528180.5	1733	10	10568	173	10184	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATTTTTTCCTAGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	89619639	89604144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89604272_89604738_89604813_89605462_89605622_89616920_89617013_89618778_89618861_89619513
ENSMUSG00000030619.11_89604256_89605621_1	chr7	-	572	3	ISM	ENSMUSG00000030619.11	ENST00000327320.8	1941	12	24202	313	24202	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATAAATGTGGCGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	89605621	89604255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89604364_89604507_89604813_89605462
ENSMUSG00000030619.11_89604508_89611569_1	chr7	-	570	3	ISM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	18341	363	18254	-363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGTTCGAGACAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	89611569	89604507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89604813_89605462_89605622_89611463
ENSMUSG00000030619.11_89604739_89620813_1	chr7	-	599	6	ISM	ENSMUSG00000030619.11	ENST00000528180.5	1733	10	9394	767	9010	-594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATAGACATTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	89620813	89604738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89604813_89605462_89605622_89616920_89617013_89618778_89618861_89619513_89619640_89620747
ENSMUSG00000030619.11_89604769_89630063_1	chr7	-	1499	11	ISM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	-153	624	121	-624	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAAGTAGAAGATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	89630063	89604768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUSG00000030619.11_89605555_89626149_1	chr7	-	571	7	ISM	ENSMUSG00000030619.11	ENST00000528180.5	1733	10	4058	1583	3674	-1410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGAGTCTAATGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	89626149	89605554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89605622_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104
ENSMUSG00000030619.11_89605555_89630184_1	chr7	-	1484	10	ISM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	-274	1410	0	-1410	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGAGTCTAATGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	89630184	89605554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUSG00000030619.11_89613984_89621531_1	chr7	-	546	6	ISM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	8379	9839	8292	-9839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAATTAAGGAGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	89621531	89613983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438
ENSMUSG00000030619.11_89616921_89626257_1	chr7	-	612	6	ISM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	3653	12776	3566	-12776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTGAATCTGGGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	89626257	89616920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104
ENSMUSG00000030619.11_89620747_89629910_1	chr7	-	604	4	ISM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	0	16602	0	-16602	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTTTTCTGAATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	89629910	89620746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUSG00000030629.16_84263403_84281940_1	chr7	-	2010	4	ISM	ENSMUSG00000030629.16	ENSMUST00000069537.3	1658	8	46619	-859	1660	-429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACACAGAGAAAACCTATAT	NA	NA	NA	NA	NA	NA	NA	NA	84281940	84263402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863
ENSMUSG00000030629.16_84263521_84283162_1	chr7	-	1986	5	ISM	ENSMUSG00000030629.16	ENSMUST00000069537.3	1658	8	45397	-741	438	-547	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAGAGATTAACTAGC	NA	NA	NA	NA	NA	NA	NA	NA	84283162	84263520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092
ENSMUSG00000030629.16_84263859_84339101_1	chr7	-	2006	7	FSM	ENSMUSG00000030629.16	ENSMUST00000209117.2	2955	7	64	885	-14	394	multi-exon	FALSE	canonical	NA	NA	NA	NA	2297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTGGCTGTACCTTACA	NA	NA	NA	NA	NA	NA	NA	NA	84339101	84263858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
ENSMUSG00000030629.16_84264262_84283567_1	chr7	-	1360	5	FSM	ENSMUSG00000030629.16	ENST00000558087.5	841	5	51	-570	33	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	84283567	84264261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283202_84283446
ENSMUSG00000030629.16_84264262_84302159_1	chr7	-	1480	6	FSM	ENSMUSG00000030629.16	ENST00000616533.4	1569	6	92	-3	92	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	84302159	84264261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283202_84283446_84283618_84302089
ENSMUSG00000030629.16_84264262_84328575_1	chr7	-	1455	6	FSM	ENSMUSG00000030629.16	ENST00000430846.5	1466	6	2	9	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	84328575	84264261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283189_84283446_84283618_84328517
ENSMUSG00000030629.16_84264504_84339091_1	chr7	-	1467	7	FSM	ENSMUSG00000030629.16	ENST00000261749.11	1702	7	-4	239	-4	-223	multi-exon	FALSE	canonical	NA	NA	NA	NA	2430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAATCATTTGTCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	84339091	84264503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283202_84283446_84283618_84302089_84302251_84338953
ENSMUSG00000030629.16_84264574_84339091_1	chr7	-	1300	6	FSM	ENSMUSG00000030629.16	ENST00000613266.4	1712	6	103	309	-4	258	multi-exon	FALSE	canonical	NA	NA	NA	NA	2164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTGTTTTCATTAAC	NA	NA	NA	NA	NA	NA	NA	NA	84339091	84264573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283202_84283446_84283682_84338953
ENSMUSG00000030629.16_84264578_84339091_1	chr7	-	1393	7	FSM	ENSMUSG00000030629.16	ENST00000261749.11	1702	7	-4	313	-4	254	multi-exon	FALSE	canonical	NA	NA	NA	NA	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGTTTTGTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	84339091	84264577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283202_84283446_84283618_84302089_84302251_84338953
ENSMUSG00000030629.16_84264624_84339091_1	chr7	-	1250	6	FSM	ENSMUSG00000030629.16	ENST00000613266.4	1712	6	103	359	-4	208	multi-exon	FALSE	canonical	NA	NA	NA	NA	1942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTAGTTATCAGTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	84339091	84264623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283202_84283446_84283682_84338953
ENSMUSG00000030629.16_84264678_84339165_1	chr7	-	1270	6	FSM	ENSMUSG00000030629.16	ENST00000613266.4	1712	6	29	413	0	154	multi-exon	FALSE	canonical	NA	NA	NA	NA	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATAGCTTTTCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	84339165	84264677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283202_84283446_84283682_84338953
ENSMUSG00000030629.16_84265049_84267173_1	chr7	-	244	2	ISM	ENSMUSG00000030629.16	ENST00000434138.1	609	5	16427	16	16427	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGATCCAGAAGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	84267173	84265048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_84265177_84267057
ENSMUSG00000030629.16_84265135_84281965_1	chr7	-	258	3	ISM	ENSMUSG00000030629.16	ENST00000434138.1	609	5	1635	102	1635	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTCAGATGTTCACAAT	NA	NA	NA	NA	NA	NA	NA	NA	84281965	84265134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_84265177_84267057_84267172_84281863
ENSMUSG00000030629.16_84266976_84328575_1	chr7	-	631	5	NNC	ENSMUSG00000030629.16	novel	637	5	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCCTCTGTGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	84328575	84266975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_84267172_84281863_84281965_84283092_84283202_84283446_84283618_84328521
ENSMUSG00000030629.16_84266976_84328575_2	chr7	-	635	5	FSM	ENSMUSG00000030629.16	ENST00000558688.5	637	5	3	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCCTCTGTGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	84328575	84266975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_84267172_84281863_84281965_84283092_84283202_84283446_84283618_84328517
ENSMUSG00000030629.16_84281906_84283547_1	chr7	-	256	3	ISM	ENSMUSG00000030629.16	ENST00000434138.1	609	5	53	16873	53	-14929	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGTGGACAAAGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	84283547	84281905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_84281965_84283092_84283189_84283446
ENSMUSG00000030630.17_84234367_84251315_1	chr7	-	1201	13	ISM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	3835	0	3835	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTCTTGGTTTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	84251315	84234366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288
ENSMUSG00000030630.17_84234480_84251353_1	chr7	-	1126	13	ISM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	3797	113	3797	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGAAGCTCCGGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	84251353	84234479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288
ENSMUSG00000030630.17_84234480_84251355_1	chr7	-	1128	13	ISM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	3795	113	3795	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGAAGCTCCGGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	84251355	84234479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288
ENSMUSG00000030630.17_84234539_84251399_1	chr7	-	1113	13	ISM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	3751	172	3751	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGCTACCGTGTTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	84251399	84234538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288
ENSMUSG00000030630.17_84238037_84254947_1	chr7	-	1198	13	ISM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	203	3670	203	-3670	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCCACCAAGCCCCGTA	NA	NA	NA	NA	NA	NA	NA	NA	84254947	84238036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288_84251400_84254850
ENSMUSG00000030630.17_84241590_84255112_1	chr7	-	1141	11	ISM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	38	7223	38	-7223	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTTGGAGGCCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	84255112	84241589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288_84251400_84254850
ENSMUSG00000030638.14_81909340_81956295_1	chr7	+	1091	8	ISM	ENSMUSG00000030638.14	ENST00000324537.5	1442	9	84620	322	84620	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAATCACTTTTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	81909339	81956295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ENSMUSG00000030638.14_81920094_81956436_1	chr7	+	977	6	ISM	ENSMUSG00000030638.14	ENST00000324537.5	1442	9	95374	181	95374	141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGCTAAAACGAGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	81920093	81956436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ENSMUSG00000030638.14_81925334_81956627_1	chr7	+	1004	4	ISM	ENSMUSG00000030638.14	ENST00000324537.5	1442	9	100614	-10	100614	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGTTATTTTCAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	81925333	81956627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_81925494_81933262_81933367_81934228_81934339_81955997
ENSMUSG00000030641.11_92511533_92515857_1	chr7	-	241	2	ISM	ENSMUSG00000030641.11	ENST00000524921.5	280	3	7603	0	7598	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATCTTTAAAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	92515857	92511532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_92511695_92515778
ENSMUSG00000030641.11_92511661_92523448_1	chr7	-	140	3	FSM	ENSMUSG00000030641.11	ENST00000524921.5	280	3	12	128	7	-128	multi-exon	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGAAGTACCAATTACAG	NA	NA	NA	NA	NA	NA	NA	NA	92523448	92511660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_92511695_92515778_92515858_92523421
ENSMUSG00000030643.15_92390875_92486484_1	chr7	+	2133	5	FSM	ENSMUSG00000030643.15	ENSMUST00000032879.15	9456	5	64	7259	64	629	multi-exon	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAAGTCTCCAATTCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	92390874	92486484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_92391051_92469190_92469292_92473005_92473090_92478733_92478918_92484896
ENSMUSG00000030643.15_92390991_92486513_1	chr7	+	2046	5	FSM	ENSMUSG00000030643.15	ENSMUST00000032879.15	9456	5	180	7230	180	658	multi-exon	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTTTACTTAGCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	92390990	92486513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_92391051_92469190_92469292_92473005_92473090_92478733_92478918_92484896
ENSMUSG00000030643.15_92391302_92486417_1	chr7	+	1999	5	FSM	ENSMUSG00000030643.15	ENST00000612684.4	3690	5	14	1677	14	562	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTAGTGTTCCTTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	92391301	92486417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_92391411_92469190_92469292_92473005_92473090_92478733_92478918_92484896
ENSMUSG00000030643.15_92426791_92485367_1	chr7	+	948	5	FSM	ENSMUSG00000030643.15	ENST00000260056.6	1399	5	299	152	299	-152	multi-exon	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTGCACTAAGCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	92426790	92485367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_92426899_92469190_92469292_92473005_92473090_92478733_92478918_92484896
ENSMUSG00000030643.15_92469128_92485520_1	chr7	+	1056	4	FSM	ENSMUSG00000030643.15	ENSMUST00000107180.8	1406	4	15	335	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTGGTAATCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	92469127	92485520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_92469292_92473005_92473090_92478733_92478918_92484896
ENSMUSG00000030643.15_92469233_92486635_1	chr7	+	2066	4	FSM	ENSMUSG00000030643.15	ENSMUST00000107180.8	1406	4	120	-780	105	-684	multi-exon	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACGACAGTAACTAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	92469232	92486635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_92469292_92473005_92473090_92478733_92478918_92484896
ENSMUSG00000030643.15_92478839_92486799_1	chr7	+	1982	2	ISM	ENSMUSG00000030643.15	ENSMUST00000107179.2	1304	3	9711	-947	9711	-520	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAAGCAATGATTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	92478838	92486799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_92478918_92484896
ENSMUSG00000030649.19_101545547_101548687_1	chr7	+	806	6	FSM	ENSMUSG00000030649.19	ENST00000538393.5	865	6	4	55	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCCAGGTGTGGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	101545546	101548687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_101545658_101546939_101547025_101547153_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUSG00000030649.19_101546939_101548687_1	chr7	+	687	5	NNC	ENSMUSG00000030649.19	novel	751	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCCAGGTGTGGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	101546938	101548687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_101547025_101547153_101547279_101547760_101547821_101548106_101548236_101548400
ENSMUSG00000030649.19_101546939_101548687_2	chr7	+	688	5	NNC	ENSMUSG00000030649.19	novel	751	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCCAGGTGTGGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	101546938	101548687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_101547025_101547153_101547279_101547768_101547821_101548106_101548245_101548400
ENSMUSG00000030649.19_101546939_101548687_3	chr7	+	696	5	FSM	ENSMUSG00000030649.19	ENST00000535503.5	687	5	0	-9	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCCAGGTGTGGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	101546938	101548687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_101547025_101547153_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUSG00000030652.12_118124285_118132524_1	chr7	-	859	6	FSM	ENSMUSG00000030652.12	ENSMUST00000032887.4	914	6	55	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGGTTTTCTTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	118132524	118124284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_118124518_118125046_118125116_118126559_118126700_118127526_118127642_118128781_118128961_118132401
ENSMUSG00000030652.12_118124285_118132551_1	chr7	-	880	6	NNC	ENSMUSG00000030652.12	novel	914	6	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGGTTTTCTTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	118132551	118124284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_118124518_118125046_118125116_118126559_118126694_118127526_118127642_118128781_118128961_118132401
ENSMUSG00000030654.10_117719348_117720442_1	chr7	-	345	2	ISM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	8443	1234	6042	75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGACAACTTCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	117720442	117719347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_117719634_117720383
ENSMUSG00000030654.10_117721231_117728783_1	chr7	-	382	4	ISM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	102	3117	102	-1808	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTAATCTAGTAAAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	117728783	117721230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_117721267_117725618_117725739_117726356_117726491_117728691
ENSMUSG00000030655.16_117792603_117797496_1	chr7	-	750	4	ISM	ENSMUSG00000030655.16	ENST00000522841.6	1697	11	14779	-15	14779	15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTATTTCTGGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	117797496	117792602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_117792943_117794258_117794361_117795033_117795259_117797413
ENSMUSG00000030655.16_117792901_117801806_1	chr7	-	695	6	ISM	ENSMUSG00000030655.16	ENST00000522841.6	1697	11	10469	283	10469	-261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGAATATTCCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	117801806	117792900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752
ENSMUSG00000030655.16_117794320_117802283_1	chr7	-	668	6	ISM	ENSMUSG00000030655.16	ENST00000522841.6	1697	11	9992	1702	9992	-1680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGCTTTTTATACCAT	NA	NA	NA	NA	NA	NA	NA	NA	117802283	117794319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226
ENSMUSG00000030655.16_117795090_117806056_1	chr7	-	673	6	ISM	ENSMUSG00000030655.16	ENST00000522841.6	1697	11	6219	2472	6219	-2450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCAGACTTGTGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	117806056	117795089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023
ENSMUSG00000030655.16_117795153_117806112_1	chr7	-	666	6	ISM	ENSMUSG00000030655.16	ENST00000522841.6	1697	11	6163	2535	6163	-2513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATCCTAGCATGACTATA	NA	NA	NA	NA	NA	NA	NA	NA	117806112	117795152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023
ENSMUSG00000030655.16_117795203_117806168_1	chr7	-	672	6	ISM	ENSMUSG00000030655.16	ENST00000522841.6	1697	11	6107	2585	6107	-2563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTTGACAGCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	117806168	117795202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023
ENSMUSG00000030655.16_117797412_117807304_1	chr7	-	746	6	ISM	ENSMUSG00000030655.16	ENST00000522841.6	1697	11	4971	4794	4971	-4772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTCTTTTAAAATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	117807304	117797411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245
ENSMUSG00000030655.16_117797531_117810098_1	chr7	-	764	7	ISM	ENSMUSG00000030655.16	ENST00000522841.6	1697	11	2177	4913	2177	-4891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATTACCAAAGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	117810098	117797530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961
ENSMUSG00000030655.16_117799919_117811668_1	chr7	-	698	7	ISM	ENSMUSG00000030655.16	ENST00000565224.5	1889	13	5332	7279	607	-7279	internal_fragment	TRUE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAATTTTTAGAAGACATG	NA	NA	NA	NA	NA	NA	NA	NA	117811668	117799918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642
ENSMUSG00000030659.15_116121147_116127264_1	chr7	+	624	6	ISM	ENSMUSG00000030659.15	ENST00000458064.6	1276	11	77	12521	77	-12414	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGACTGATGGATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	116121146	116127264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234
ENSMUSG00000030659.15_116123595_116128264_1	chr7	+	669	7	ISM	ENSMUSG00000030659.15	ENST00000458064.6	1276	11	2525	11521	2525	-11414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGGCTCAGGATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	116123594	116128264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209
ENSMUSG00000030659.15_116126872_116139261_1	chr7	+	682	6	ISM	ENSMUSG00000030659.15	ENST00000458064.6	1276	11	5802	524	5802	-417	internal_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTAATTTTGTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	116126871	116139261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116135096_116135268_116139179
ENSMUSG00000030659.15_116126977_116139678_1	chr7	+	579	7	ISM	ENSMUSG00000030659.15	ENST00000458064.6	1276	11	5907	107	5907	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAAGTCCTGATGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	116126976	116139678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116135096_116135268_116139179_116139262_116139676
ENSMUSG00000030663.13_115692601_115703637_1	chr7	+	545	4	FSM	ENSMUSG00000030663.13	ENST00000525684.1	567	4	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGATGATGTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	115692600	115703637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_115692761_115698674_115698759_115702445_115702556_115703446
ENSMUSG00000030663.13_115692706_115703637_1	chr7	+	440	4	FSM	ENSMUSG00000030663.13	ENST00000525684.1	567	4	127	0	127	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGATGATGTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	115692705	115703637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_115692761_115698674_115698759_115702445_115702556_115703446
ENSMUSG00000030663.13_115692706_115704445_1	chr7	+	1309	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	170	0	127	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	115692705	115704445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
ENSMUSG00000030672.13_126810780_126813470_1	chr7	+	756	7	NNC	ENSMUSG00000030672.13	novel	766	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTGTGTTCATGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	126810779	126813470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_126810936_126812032_126812116_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ENSMUSG00000030672.13_126810885_126813470_1	chr7	+	661	7	FSM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	105	0	105	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTGTGTTCATGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	126810884	126813470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126810936_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ENSMUSG00000030672.13_126810885_126813470_2	chr7	+	655	7	NNC	ENSMUSG00000030672.13	novel	766	7	NA	NA	105	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTGTGTTCATGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	126810884	126813470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_126810936_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813268
ENSMUSG00000030677.9_126626901_126641643_1	chr7	-	2112	14	NNC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCCTGGTTTTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	126641643	126626900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633200_126633295_126633424_126634919_126635113_126641515
ENSMUSG00000030678.8_126621306_126625078_1	chr7	-	1874	4	ISM	ENSMUSG00000030678.8	ENSMUST00000032916.6	2347	5	546	0	546	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	126625078	126621305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475
ENSMUSG00000030678.8_126621701_126626196_1	chr7	-	1888	6	FSM	ENSMUSG00000030678.8	ENSMUST00000206254.2	2282	6	0	394	0	361	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGAAGCGGGGAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	126626196	126621700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399_126625487_126626122
ENSMUSG00000030681.19_126586161_126588740_1	chr7	-	582	5	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	25053	129	25053	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGACCTGGCGGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	126588740	126586160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717
ENSMUSG00000030681.19_126586270_126588858_1	chr7	-	591	5	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	24935	238	24935	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGGCCTGAAATCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	126588858	126586269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717
ENSMUSG00000030681.19_126586780_126589012_1	chr7	-	597	4	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	24781	748	24781	-748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCTGGAGCTGGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	126589012	126586779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126586838_126587489_126587617_126587997_126588115_126588717
ENSMUSG00000030681.19_126587588_126591503_1	chr7	-	590	4	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	22290	1556	22290	-1556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGGAGGCTGAGTCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	126591503	126587587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126587617_126587997_126588115_126588717_126589105_126591446
ENSMUSG00000030681.19_126588765_126591791_1	chr7	-	604	3	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	22002	2733	22002	-2733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTAGCCATCGAAATTAC	NA	NA	NA	NA	NA	NA	NA	NA	126591791	126588764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126589105_126591446_126591645_126591725
ENSMUSG00000030681.19_126588822_126591837_1	chr7	-	593	3	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	21956	2790	21956	-2790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGTCAGTGGAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	126591837	126588821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126589105_126591446_126591645_126591725
ENSMUSG00000030681.19_126588952_126592711_1	chr7	-	616	4	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	21082	2920	21082	-2920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTATCATTCGCATGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	126592711	126588951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126589105_126591446_126591645_126591725_126591971_126592691
ENSMUSG00000030681.19_126589018_126592762_1	chr7	-	601	4	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	21031	2986	21031	-2986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCGTCCCGAGTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	126592762	126589017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126589105_126591446_126591645_126591725_126591971_126592691
ENSMUSG00000030681.19_126589065_126592820_1	chr7	-	612	4	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	20973	3033	20973	-3033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCTTTTCTCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	126592820	126589064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126589105_126591446_126591645_126591725_126591971_126592691
ENSMUSG00000030681.19_126591513_126592927_1	chr7	-	613	3	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	20866	5481	20866	-5481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACGTCATCACCATCG	NA	NA	NA	NA	NA	NA	NA	NA	126592927	126591512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126591645_126591725_126591971_126592691
ENSMUSG00000030681.19_126591623_126594963_1	chr7	-	605	4	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	18830	5591	18830	-5591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCACTGGATCCCGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	126594963	126591622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126591645_126591725_126591971_126592691_126592974_126594907
ENSMUSG00000030681.19_126591827_126595080_1	chr7	-	599	3	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	18713	5795	18713	-5795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGCCCTCAGCTGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	126595080	126591826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126591971_126592691_126592974_126594907
ENSMUSG00000030681.19_126591936_126595452_1	chr7	-	597	4	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	18341	5904	18341	-5904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGATGAAGTCCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	126595452	126591935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126591971_126592691_126592974_126594907_126595145_126595409
ENSMUSG00000030681.19_126592834_126597674_1	chr7	-	634	5	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	16119	6802	16119	-6802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGGCTGGAGACCGCT	NA	NA	NA	NA	NA	NA	NA	NA	126597674	126592833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644
ENSMUSG00000030681.19_126592910_126597719_1	chr7	-	603	5	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	16074	6878	16074	-6878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCAGAGCAGCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	126597719	126592909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644
ENSMUSG00000030681.19_126594907_126600718_1	chr7	-	656	5	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	13075	8875	13075	-8875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCCATCTCCACCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	126600718	126594906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651
ENSMUSG00000030681.19_126597466_126613746_1	chr7	-	590	5	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	47	11434	47	-11434	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCAAGCTCTGCGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	126613746	126597465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126613690
ENSMUSG00000030682.5_126575420_126576225_1	chr7	+	695	2	ISM	ENSMUSG00000030682.5	ENSMUST00000206346.2	806	6	-340	2598	334	-2598	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGAACTTTACCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	126575419	126576225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126575979_126576089
ENSMUSG00000030682.5_126575550_126577587_1	chr7	+	718	3	ISM	ENSMUSG00000030682.5	ENSMUST00000206346.2	806	6	-210	1236	-210	-1236	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTGCTTTGATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	126575549	126577587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126575979_126576089_126576225_126577433
ENSMUSG00000030682.5_126575760_126578575_1	chr7	+	672	5	ISM	ENSMUSG00000030682.5	ENSMUST00000032920.5	1974	6	674	759	0	-248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAAGTGGGGGTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	126575759	126578575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578493
ENSMUSG00000030682.5_126575902_126578847_1	chr7	+	671	6	FSM	ENSMUSG00000030682.5	ENSMUST00000032920.5	1974	6	816	487	0	24	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCCTCTCCCATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	126575901	126578847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578493_126578576_126578706
ENSMUSG00000030682.5_126578085_126579209_1	chr7	+	669	3	ISM	ENSMUSG00000030682.5	ENSMUST00000205830.2	805	5	2060	-216	2060	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCATTGGACCTGGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	126578084	126579209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126578169_126578493_126578576_126578706
ENSMUSG00000030682.5_126578493_126579334_1	chr7	+	711	2	ISM	ENSMUSG00000030682.5	ENSMUST00000205830.2	805	5	2468	-341	2468	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATGTGTTTACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	126578492	126579334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126578576_126578706
ENSMUSG00000030683.12_126552641_126569278_1	chr7	+	2201	15	ISM	ENSMUSG00000030683.12	ENSMUST00000106332.3	2852	18	2503	164	2492	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGACCTCTGGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	126552640	126569278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126552697_126552886_126553089_126557440_126557627_126558218_126558388_126558962_126559127_126560908_126561110_126561524_126561664_126562436_126562634_126562734_126562930_126565896_126566089_126566185_126566378_126566878_126566918_126567098_126567217_126567331_126567429_126569224
ENSMUSG00000030683.12_126553039_126569442_1	chr7	+	2157	14	ISM	ENSMUSG00000030683.12	ENSMUST00000106332.3	2852	18	2901	0	2890	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCCTCTGCTTAGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	126553038	126569442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126553089_126557440_126557627_126558218_126558388_126558962_126559127_126560908_126561110_126561524_126561664_126562436_126562634_126562734_126562930_126565896_126566089_126566185_126566378_126566878_126566918_126567098_126567217_126567331_126567429_126569224
ENSMUSG00000030683.12_126557502_126569580_1	chr7	+	2184	13	ISM	ENSMUSG00000030683.12	ENSMUST00000106332.3	2852	18	7364	-138	7353	138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCTATCCCCATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	126557501	126569580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126557627_126558218_126558388_126558962_126559127_126560908_126561110_126561524_126561664_126562436_126562634_126562734_126562930_126565896_126566089_126566185_126566378_126566878_126566918_126567098_126567217_126567331_126567429_126569224
ENSMUSG00000030683.12_126557554_126569641_1	chr7	+	2193	13	ISM	ENSMUSG00000030683.12	ENST00000350527.7	3147	18	7405	137	7405	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAGGGTGAGAAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	126557553	126569641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126557627_126558218_126558388_126558962_126559127_126560908_126561110_126561524_126561664_126562436_126562634_126562734_126562930_126565896_126566089_126566185_126566378_126566878_126566918_126567098_126567217_126567331_126567429_126569224
ENSMUSG00000030683.12_126558276_126569778_1	chr7	+	2200	12	ISM	ENSMUSG00000030683.12	ENST00000350527.7	3147	18	8127	0	8127	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCTGGTGAGTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	126558275	126569778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126558388_126558962_126559127_126560908_126561110_126561524_126561664_126562436_126562634_126562734_126562930_126565896_126566089_126566185_126566378_126566878_126566918_126567098_126567217_126567331_126567429_126569224
ENSMUSG00000030685.6_126528337_126541428_1	chr7	+	557	5	ISM	ENSMUSG00000030685.6	ENSMUST00000032924.6	1676	6	286	3375	286	-3375	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCTTTCTACGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	126528336	126541428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126528471_126529804_126529975_126540504_126540595_126540682_126540736_126541318
ENSMUSG00000030685.6_126528396_126541482_1	chr7	+	552	5	ISM	ENSMUSG00000030685.6	ENSMUST00000032924.6	1676	6	345	3321	345	-3321	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTATGCTACGGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	126528395	126541482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126528471_126529804_126529975_126540504_126540595_126540682_126540736_126541318
ENSMUSG00000030685.6_126529823_126544139_1	chr7	+	574	5	ISM	ENSMUSG00000030685.6	ENSMUST00000032924.6	1676	6	1772	664	1772	-664	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGAGGCCACAGGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	126529822	126544139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126529975_126540504_126540595_126540682_126540736_126541318_126541515_126544056
ENSMUSG00000030685.6_126529924_126544242_1	chr7	+	576	5	ISM	ENSMUSG00000030685.6	ENSMUST00000032924.6	1676	6	1873	561	1873	-561	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCCACGATGAGCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	126529923	126544242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126529975_126540504_126540595_126540682_126540736_126541318_126541515_126544056
ENSMUSG00000030685.6_126540697_126544393_1	chr7	+	572	3	ISM	ENSMUSG00000030685.6	ENSMUST00000032924.6	1676	6	12646	410	12646	-410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTGCATGCTGTTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	126540696	126544393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126540736_126541318_126541515_126544056
ENSMUSG00000030688.16_100970320_100995345_1	chr7	+	1143	7	FSM	ENSMUSG00000030688.16	ENST00000545082.5	1075	7	-68	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCGGCTCTCTGCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	100970319	100995345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_100970560_100970920_100971154_100991704_100991853_100992390_100992495_100993123_100993242_100994841_100994895_100995098
ENSMUSG00000030689.16_126451011_126456959_1	chr7	-	1382	3	ISM	ENSMUSG00000030689.16	ENSMUST00000050833.14	1944	5	3676	259	3676	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCAGAGCACCTGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	126456959	126451010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126452164_126456397_126456515_126456847
ENSMUSG00000030689.16_126451297_126460928_1	chr7	-	1351	7	FSM	ENSMUSG00000030689.16	ENSMUST00000106343.3	1973	7	82	540	43	455	multi-exon	FALSE	canonical	NA	NA	NA	NA	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCCATGTAAACGTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	126460928	126451296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ENSMUSG00000030689.16_126451364_126460965_1	chr7	-	1321	7	FSM	ENSMUSG00000030689.16	ENSMUST00000106343.3	1973	7	45	607	6	388	multi-exon	FALSE	canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAGACAGGCCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	126460965	126451363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ENSMUSG00000030689.16_126451449_126461010_1	chr7	-	1281	7	FSM	ENSMUSG00000030689.16	ENSMUST00000106343.3	1973	7	0	692	0	303	multi-exon	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACGGGTGGTTGCATATT	NA	NA	NA	NA	NA	NA	NA	NA	126461010	126451448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ENSMUSG00000030689.16_126452102_126456959_1	chr7	-	240	3	ISM	ENSMUSG00000030689.16	ENST00000567705.5	827	7	4012	289	3676	-289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCCAGTGTTGGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	126456959	126452101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126452164_126456397_126456464_126456847
ENSMUSG00000030691.16_100925859_100932102_1	chr7	+	887	5	FSM	ENSMUSG00000030691.16	ENST00000409263.5	902	5	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATCTTTCCTCAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	100925858	100932102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_100925909_100926032_100926211_100927557_100927688_100927778_100927862_100931656
ENSMUSG00000030695.17_126394406_126399208_1	chr7	-	1336	9	FSM	ENSMUSG00000030695.17	ENST00000412304.6	1512	9	179	-3	179	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	126399208	126394405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126399173
ENSMUSG00000030695.17_126394523_126396573_1	chr7	-	1002	6	ISM	ENSMUSG00000030695.17	ENST00000569798.5	1270	7	363	0	363	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCAGGCTCTTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	126396573	126394522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508
ENSMUSG00000030695.17_126394523_126396720_1	chr7	-	1149	6	ISM	ENSMUSG00000030695.17	ENST00000569798.5	1270	7	216	0	216	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCAGGCTCTTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	126396720	126394522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508
ENSMUSG00000030695.17_126394573_126394802_1	chr7	-	132	2	ISM	ENSMUSG00000030695.17	ENSMUST00000087566.11	1549	10	3511	165	2134	-50	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCCATCAACACTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	126394802	126394572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126394687_126394784
ENSMUSG00000030695.17_126394625_126396923_1	chr7	-	1155	7	FSM	ENSMUSG00000030695.17	ENST00000569798.5	1270	7	13	102	13	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	4122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTCTCTTCATCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	126396923	126394624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815
ENSMUSG00000030695.17_126394872_126399619_1	chr7	-	1093	8	ISM	ENSMUSG00000030695.17	ENSMUST00000106348.8	1460	9	0	465	0	-349	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCAGGCCTCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	126399619	126394871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126399459
ENSMUSG00000030695.17_126394928_126395191_1	chr7	-	127	2	ISM	ENSMUSG00000030695.17	ENST00000569798.5	1270	7	1745	405	1745	-405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCAACAAGTGCCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	126395191	126394927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126394985_126395121
ENSMUSG00000030695.17_126394970_126395250_1	chr7	-	144	2	ISM	ENSMUSG00000030695.17	ENST00000569798.5	1270	7	1686	447	1686	-447	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGGGCAGAGTGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	126395250	126394969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126394985_126395121
ENSMUSG00000030697.8_126386392_126391638_1	chr7	-	713	7	ISM	ENSMUSG00000030697.8	ENSMUST00000032936.8	1359	9	30	1354	30	-1352	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGCAGTACCTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	126391638	126386391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
ENSMUSG00000030699.17_126380655_126384376_1	chr7	+	1367	7	NNC	ENSMUSG00000030699.17	novel	1718	7	NA	NA	0	-155	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCAGCTCCCTTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	126380654	126384376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_126380797_126380884_126381120_126382016_126382285_126382376_126382548_126383665_126383783_126383863_126384048_126384126
ENSMUSG00000030699.17_126380655_126384395_1	chr7	+	1388	7	FSM	ENSMUSG00000030699.17	ENST00000627355.2	1718	7	-4	334	0	-136	multi-exon	FALSE	canonical	NA	NA	NA	NA	1534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGTAGCATCCGCAT	NA	NA	NA	NA	NA	NA	NA	NA	126380654	126384395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126380797_126380884_126381120_126382016_126382285_126382376_126382548_126383663_126383783_126383863_126384048_126384126
ENSMUSG00000030699.17_126380884_126384531_1	chr7	+	1383	6	ISM	ENSMUSG00000030699.17	ENST00000627355.2	1718	7	225	198	225	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGTCCAGCTGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	126380883	126384531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126381120_126382016_126382285_126382376_126382548_126383663_126383783_126383863_126384048_126384126
ENSMUSG00000030699.17_126380999_126384551_1	chr7	+	1288	6	ISM	ENSMUSG00000030699.17	ENST00000627355.2	1718	7	340	178	340	20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCCCTCAGCTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	126380998	126384551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126381120_126382016_126382285_126382376_126382548_126383663_126383783_126383863_126384048_126384126
ENSMUSG00000030699.17_126382013_126384732_1	chr7	+	1350	5	NNC	ENSMUSG00000030699.17	novel	1718	7	NA	NA	1354	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCTAATGGTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	126382012	126384732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_126382285_126382376_126382548_126383665_126383783_126383863_126384048_126384126
ENSMUSG00000030699.17_126382013_126384732_2	chr7	+	1346	5	NNC	ENSMUSG00000030699.17	novel	1718	7	NA	NA	1354	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCTAATGGTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	126382012	126384732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_126382285_126382376_126382548_126383663_126383777_126383863_126384048_126384126
ENSMUSG00000030699.17_126382013_126384732_3	chr7	+	1352	5	ISM	ENSMUSG00000030699.17	ENST00000627355.2	1718	7	1354	-3	1354	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCTAATGGTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	126382012	126384732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126382285_126382376_126382548_126383663_126383783_126383863_126384048_126384126
ENSMUSG00000030704.15_100256897_100277664_1	chr7	+	717	3	ISM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	0	12811	0	-12811	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAATGTTTTCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	100256896	100277664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_100257501_100275758_100275818_100277610
ENSMUSG00000030704.15_100256897_100289226_1	chr7	+	1861	8	FSM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	0	1249	0	-1249	multi-exon	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATCAGAACAGGTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	100256896	100289226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ENSMUSG00000030704.15_100257038_100289278_1	chr7	+	1772	8	FSM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	141	1197	141	-1197	multi-exon	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAGCCAAGTACTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	100257037	100289278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ENSMUSG00000030704.15_100257153_100283866_1	chr7	+	694	6	ISM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	360	6609	256	-6609	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGGAGAGAGGAAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	100257152	100283866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851
ENSMUSG00000030704.15_100257405_100288570_1	chr7	+	697	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	612	1905	508	-1905	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCCATACTCTTTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	100257404	100288570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ENSMUSG00000030704.15_100257428_100289696_1	chr7	+	1800	8	FSM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	531	779	531	-779	multi-exon	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGGAAATAAAAGTCACTAT	NA	NA	NA	NA	NA	NA	NA	NA	100257427	100289696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ENSMUSG00000030704.15_100257445_100288587_1	chr7	+	674	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	652	1888	548	-1888	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTGCAGTGTGAATATT	NA	NA	NA	NA	NA	NA	NA	NA	100257444	100288587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ENSMUSG00000030704.15_100279126_100288831_1	chr7	+	668	5	ISM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	22333	1644	22229	-1644	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGAAAATCTCAGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	100279125	100288831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ENSMUSG00000030706.18_100197179_100209026_1	chr7	-	1676	4	ISM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	23283	2221	-12199	737	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAGTAACAGAAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	100209026	100197178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954
ENSMUSG00000030706.18_100197556_100232282_1	chr7	-	1660	8	FSM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	27	2598	27	360	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCAGCTGCCAACTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	100232282	100197555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100232196
ENSMUSG00000030714.15_126264088_126272097_1	chr7	+	970	7	ISM	ENSMUSG00000030714.15	ENSMUST00000032956.10	1312	10	15607	0	-6619	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1064	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTTGTACTTTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	126264087	126272097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
ENSMUSG00000030717.10_126222424_126224694_1	chr7	-	672	3	FSM	ENSMUSG00000030717.10	ENSMUST00000032961.4	829	3	154	3	154	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGCTTTGGCGTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	126224694	126222423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126222752_126224061_126224206_126224494
ENSMUSG00000030717.10_126222424_126224848_1	chr7	-	821	3	NNC	ENSMUSG00000030717.10	novel	829	3	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGCTTTGGCGTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	126224848	126222423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_126222747_126224061_126224206_126224494
ENSMUSG00000030717.10_126222450_126224848_1	chr7	-	795	3	NNC	ENSMUSG00000030717.10	novel	829	3	NA	NA	0	-29	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGCAACAATAAATCGTAC	NA	NA	NA	NA	NA	NA	NA	NA	126224848	126222449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_126222747_126224061_126224206_126224494
ENSMUSG00000030718.10_99976195_99984300_1	chr7	-	1119	5	ISM	ENSMUSG00000030718.10	ENSMUST00000032963.10	2772	14	37214	251	37214	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGTCTTTGCCCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	99984300	99976194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254
ENSMUSG00000030718.10_99976331_99987593_1	chr7	-	1084	6	ISM	ENSMUSG00000030718.10	ENSMUST00000032963.10	2772	14	33921	387	33921	-387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACTGAATTTAACCATT	NA	NA	NA	NA	NA	NA	NA	NA	99987593	99976330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576
ENSMUSG00000030718.10_99976443_99987700_1	chr7	-	1079	6	ISM	ENSMUSG00000030718.10	ENSMUST00000032963.10	2772	14	33814	499	33814	-499	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGCCAGGCTGCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	99987700	99976442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576
ENSMUSG00000030718.10_99976557_99994257_1	chr7	-	1221	9	ISM	ENSMUSG00000030718.10	ENSMUST00000032963.10	2772	14	27257	613	27257	-613	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGTATCCCAAGAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	99994257	99976556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158
ENSMUSG00000030718.10_99976820_100003938_1	chr7	-	1147	12	ISM	ENSMUSG00000030718.10	ENSMUST00000032963.10	2772	14	17576	876	17576	-876	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTGCCTAGGATGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	100003938	99976819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915
ENSMUSG00000030718.10_99977000_100004530_1	chr7	-	1093	13	ISM	ENSMUSG00000030718.10	ENSMUST00000032963.10	2772	14	16984	1056	16984	-1056	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCTGTCTCCTCCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	100004530	99976999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004009_100004474
ENSMUSG00000030718.10_99978249_100020985_1	chr7	-	1090	13	ISM	ENSMUSG00000030718.10	ENSMUST00000032963.10	2772	14	529	2305	529	-2305	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTGGTAAGTGTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	100020985	99978248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004009_100004474_100004569_100020929
ENSMUSG00000030718.10_99981074_100021141_1	chr7	-	1176	12	ISM	ENSMUSG00000030718.10	ENSMUST00000032963.10	2772	14	373	5130	373	-5130	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACAAGGTAAGTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	100021141	99981073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004009_100004474_100004569_100020929
ENSMUSG00000030718.10_99984344_100021251_1	chr7	-	1096	10	ISM	ENSMUSG00000030718.10	ENSMUST00000032963.10	2772	14	263	8400	263	-8400	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAGAAAAGTACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	100021251	99984343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004009_100004474_100004569_100020929
ENSMUSG00000030720.17_126171445_126174590_1	chr7	-	475	5	NNC	ENSMUSG00000030720.17	novel	792	9	NA	NA	5446	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACAGGAGTTGCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	126174590	126171444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_126171554_126171642_126171784_126174165_126174260_126174374_126174431_126174515
ENSMUSG00000030720.17_126171445_126179401_1	chr7	-	887	9	ISM	ENSMUSG00000030720.17	ENST00000565316.6	1039	11	635	0	635	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACAGGAGTTGCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	126179401	126171444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174642_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315
ENSMUSG00000030720.17_126171445_126180036_1	chr7	-	792	9	FSM	ENSMUSG00000030720.17	ENST00000395653.9	792	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACAGGAGTTGCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	126180036	126171444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126179315_126179402_126179964
ENSMUSG00000030720.17_126171445_126183958_1	chr7	-	1242	13	NNC	ENSMUSG00000030720.17	novel	2158	13	NA	NA	-506	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACAGGAGTTGCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	126183958	126171444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180002_126183770
ENSMUSG00000030720.17_126171445_126183958_2	chr7	-	1237	13	FSM	ENSMUSG00000030720.17	ENST00000569430.7	2158	13	921	0	-506	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACAGGAGTTGCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	126183958	126171444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126179986_126183759
ENSMUSG00000030720.17_126171445_126183958_3	chr7	-	1232	12	NNC	ENSMUSG00000030720.17	novel	2158	13	NA	NA	-506	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACAGGAGTTGCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	126183958	126171444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126183743
ENSMUSG00000030720.17_126171519_126179355_1	chr7	-	673	9	ISM	ENSMUSG00000030720.17	ENST00000355477.10	945	11	681	74	681	-74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTCTGACACCTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	126179355	126171518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178572_126178646_126179315
ENSMUSG00000030720.17_126171523_126179574_1	chr7	-	879	10	ISM	ENSMUSG00000030720.17	ENST00000565316.6	1039	11	462	78	462	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTATCTCTGACACCTT	NA	NA	NA	NA	NA	NA	NA	NA	126179574	126171522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174642_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504
ENSMUSG00000030720.17_126171643_126177094_1	chr7	-	515	6	NNC	ENSMUSG00000030720.17	novel	792	9	NA	NA	2942	-198	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGCCAGTTGGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	126177094	126171642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_126171784_126174165_126174260_126174374_126174425_126174515_126174585_126174661_126174709_126176980
ENSMUSG00000030720.17_126171643_126179584_1	chr7	-	759	9	ISM	ENSMUSG00000030720.17	ENST00000355477.10	945	11	452	198	452	-198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGCCAGTTGGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	126179584	126171642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178572_126178646_126179315_126179402_126179504
ENSMUSG00000030720.17_126171643_126180036_1	chr7	-	925	10	ISM	ENSMUSG00000030720.17	ENST00000565316.6	1039	11	0	198	0	-198	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGCCAGTTGGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	126180036	126171642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126171784_126174165_126174260_126174374_126174431_126174642_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964
ENSMUSG00000030720.17_126171700_126184079_1	chr7	-	1192	12	NNC	ENSMUSG00000030720.17	novel	2158	13	NA	NA	-627	-255	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGGCTCCTGGGTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	126184079	126171699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180002_126183770
ENSMUSG00000030720.17_126171759_126179996_1	chr7	-	675	10	ISM	ENSMUSG00000030720.17	ENST00000355477.10	945	11	40	314	40	-314	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTCTGCTTGAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	126179996	126171758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178572_126178646_126179315_126179402_126179504_126179585_126179964
ENSMUSG00000030720.17_126174166_126184119_1	chr7	-	1138	10	NNC	ENSMUSG00000030720.17	novel	2158	13	NA	NA	-667	-19	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGAGTGCTGCCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	126184119	126174165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126183743
ENSMUSG00000030720.17_126174184_126184184_1	chr7	-	1190	11	ISM	ENSMUSG00000030720.17	ENST00000569430.7	2158	13	695	2739	695	-37	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTAGCCCTGCTCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	126184184	126174183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126179986_126183759
ENSMUSG00000030720.17_126174200_126184197_1	chr7	-	1192	11	NNC	ENSMUSG00000030720.17	novel	2158	13	NA	NA	682	-53	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACGGTTCACCTGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	126184197	126174199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180002_126183770
ENSMUSG00000030720.17_126174202_126184206_1	chr7	-	1189	10	NNC	ENSMUSG00000030720.17	novel	2158	13	NA	NA	673	-55	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATACGGTTCACCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	126184206	126174201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126183743
ENSMUSG00000030720.17_126174390_126180842_1	chr7	-	453	7	ISM	ENSMUSG00000030720.17	ENST00000357806.11	884	10	67	2945	67	-243	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGTACCGATGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	126180842	126174389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126179315_126179402_126179964_126180037_126180817
ENSMUSG00000030720.17_126177008_126184466_1	chr7	-	1197	7	ISM	ENSMUSG00000030720.17	ENST00000569430.7	2158	13	413	5563	413	-2861	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCGAGACCCCAGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	126184466	126177007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126179986_126183759
ENSMUSG00000030720.17_126177057_126184524_1	chr7	-	1206	7	ISM	ENSMUSG00000030720.17	ENST00000569430.7	2158	13	355	5612	355	-2910	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAGGGGAAAACGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	126184524	126177056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126179986_126183759
ENSMUSG00000030720.17_126178419_126184667_1	chr7	-	1233	5	NNC	ENSMUSG00000030720.17	novel	803	9	NA	NA	212	-4272	intron_retention	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCCAGGCTGGCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	126184667	126178418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126183743
ENSMUSG00000030720.17_126178435_126184656_1	chr7	-	1216	6	NNC	ENSMUSG00000030720.17	novel	803	9	NA	NA	223	-4288	intron_retention	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTTACCTGGGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	126184656	126178434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180002_126183770
ENSMUSG00000030720.17_126179344_126184795_1	chr7	-	1195	4	ISM	ENSMUSG00000030720.17	ENST00000569430.7	2158	13	84	7899	84	-5197	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTCAGTGGGGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	126184795	126179343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126179402_126179504_126179585_126179964_126179986_126183759
ENSMUSG00000030720.17_126179442_126184850_1	chr7	-	1245	2	NNC	ENSMUSG00000030720.17	novel	803	9	NA	NA	29	-5295	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGGTGGCCTTCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	126184850	126179441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_126179603_126183766
ENSMUSG00000030726.17_99732086_99737344_1	chr7	-	1050	2	ISM	ENSMUSG00000030726.17	ENST00000532497.5	1546	11	33290	-514	33290	514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTAAAATAAGAATGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	99737344	99732085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99733062_99737270
ENSMUSG00000030726.17_99732600_99742688_1	chr7	-	755	4	ISM	ENSMUSG00000030726.17	ENST00000532497.5	1546	11	27946	0	27946	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTCAAGAATGACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	99742688	99732599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578
ENSMUSG00000030726.17_99732600_99748743_1	chr7	-	991	6	ISM	ENSMUSG00000030726.17	ENST00000532497.5	1546	11	21891	0	21891	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTCAAGAATGACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	99748743	99732599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670
ENSMUSG00000030726.17_99732790_99745742_1	chr7	-	728	5	ISM	ENSMUSG00000030726.17	ENST00000532497.5	1546	11	24892	190	24892	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTTGCCTCGCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	99745742	99732789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579
ENSMUSG00000030726.17_99732869_99755840_1	chr7	-	1055	8	ISM	ENSMUSG00000030726.17	ENST00000532497.5	1546	11	14794	269	14794	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGTAAATGCTACCTC	NA	NA	NA	NA	NA	NA	NA	NA	99755840	99732868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769
ENSMUSG00000030726.17_99732869_99755866_1	chr7	-	1081	8	ISM	ENSMUSG00000030726.17	ENST00000532497.5	1546	11	14768	269	14768	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGTAAATGCTACCTC	NA	NA	NA	NA	NA	NA	NA	NA	99755866	99732868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769
ENSMUSG00000030726.17_99732982_99749710_1	chr7	-	693	7	ISM	ENSMUSG00000030726.17	ENST00000532497.5	1546	11	20924	382	20924	-364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGCTGCCGCTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	99749710	99732981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626
ENSMUSG00000030726.17_99733035_99757758_1	chr7	-	991	9	ISM	ENSMUSG00000030726.17	ENST00000532497.5	1546	11	12876	435	12876	-417	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCACAGACAGTGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	99757758	99733034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718
ENSMUSG00000030726.17_99737328_99761532_1	chr7	-	963	9	ISM	ENSMUSG00000030726.17	ENSMUST00000208670.2	1716	13	9141	4710	9102	-4710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACGAAAGCGTGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	99761532	99737327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476
ENSMUSG00000030726.17_99742579_99770662_1	chr7	-	1032	9	ISM	ENSMUSG00000030726.17	ENSMUST00000032969.14	3069	12	110	11261	11	-9961	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCATTGCTAAGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	99770662	99742578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ENSMUSG00000030726.17_99745665_99770662_1	chr7	-	734	7	ISM	ENSMUSG00000030726.17	ENST00000532497.5	1546	11	-28	13065	11	-13047	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACCAAAGCTGGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	99770662	99745664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99768880_99768937_99770570
ENSMUSG00000030727.13_126028271_126041072_1	chr7	+	1141	8	ISM	ENSMUSG00000030727.13	ENSMUST00000106407.9	2234	13	33	4001	33	-4001	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCTCCGGGCTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	126028270	126041072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008
ENSMUSG00000030727.13_126028821_126043330_1	chr7	+	1131	8	ISM	ENSMUSG00000030727.13	ENSMUST00000106405.2	2279	12	209	1743	209	-1743	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACAGGCGCGGGCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	126028820	126043330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301
ENSMUSG00000030727.13_126028873_126043388_1	chr7	+	1137	8	ISM	ENSMUSG00000030727.13	ENSMUST00000106405.2	2279	12	261	1685	261	-1685	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGTGAAGCTGCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	126028872	126043388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301
ENSMUSG00000030727.13_126028923_126043453_1	chr7	+	1152	8	ISM	ENSMUSG00000030727.13	ENSMUST00000106405.2	2279	12	311	1620	311	-1620	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGGTGCAGCGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	126028922	126043453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301
ENSMUSG00000030727.13_126034948_126044022_1	chr7	+	1114	9	NIC	ENSMUSG00000030727.13	novel	2279	12	NA	NA	6336	-1051	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAAGACACTCCGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	126034947	126044022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043694_126043751_126043991
ENSMUSG00000030727.13_126037598_126044518_1	chr7	+	1152	9	NIC	ENSMUSG00000030727.13	novel	2279	12	NA	NA	8986	-555	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGGATGAGGCGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	126037597	126044518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043694_126043751_126043991_126044109_126044468
ENSMUSG00000030727.13_126037810_126044636_1	chr7	+	1139	8	NIC	ENSMUSG00000030727.13	novel	2279	12	NA	NA	9198	-437	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCAGGTCTCAGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	126037809	126044636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043694_126043751_126043991_126044109_126044468
ENSMUSG00000030727.13_126037962_126044805_1	chr7	+	1156	8	NIC	ENSMUSG00000030727.13	novel	2279	12	NA	NA	9350	-268	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTACCATGCTCCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	126037961	126044805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043694_126043751_126043991_126044109_126044468
ENSMUSG00000030727.13_126039363_126044913_1	chr7	+	1122	7	NIC	ENSMUSG00000030727.13	novel	2279	12	NA	NA	10751	-160	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGGCTCCTCGCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	126039362	126044913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043694_126043751_126043991_126044109_126044468
ENSMUSG00000030730.13_126045030_126046648_1	chr7	-	641	5	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	15632	0	15632	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCTTCCTTATATCTT	NA	NA	NA	NA	NA	NA	NA	NA	126046648	126045029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126045299_126045716_126045759_126046042_126046161_126046308_126046427_126046554
ENSMUSG00000030730.13_126045240_126047122_1	chr7	-	647	7	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	15158	210	15158	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATGCATCTTCAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	126047122	126045239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126045299_126045716_126045759_126046042_126046161_126046308_126046427_126046554_126046689_126046773_126046860_126047032
ENSMUSG00000030730.13_126046063_126047235_1	chr7	-	639	5	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	15045	1033	15045	-1033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCGGAACTATCTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	126047235	126046062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126046161_126046308_126046427_126046554_126046689_126046773_126046860_126047032
ENSMUSG00000030730.13_126046346_126047458_1	chr7	-	629	5	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	14822	1316	14822	-1316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCACTTCCTCATCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	126047458	126046345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126046427_126046554_126046689_126046773_126046860_126047032_126047236_126047333
ENSMUSG00000030730.13_126046627_126047795_1	chr7	-	659	5	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	14485	1597	14485	-1597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCCCCGAGCCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	126047795	126046626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126046689_126046773_126046860_126047032_126047236_126047333_126047555_126047708
ENSMUSG00000030730.13_126047074_126047965_1	chr7	-	640	3	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	14315	2044	14315	-2044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGGCTGGCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	126047965	126047073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126047236_126047333_126047555_126047708
ENSMUSG00000030730.13_126047204_126049324_1	chr7	-	637	4	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	12956	2174	12956	-2174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCTGATCCCTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	126049324	126047203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126047236_126047333_126047555_126047708_126048045_126049276
ENSMUSG00000030730.13_126047429_126049462_1	chr7	-	648	3	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	12818	2399	12818	-2399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTGGCTGCCGTGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	126049462	126047428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126047555_126047708_126048045_126049276
ENSMUSG00000030730.13_126047823_126051889_1	chr7	-	630	4	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	10391	2793	10391	-2793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCGAGCAGCGGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	126051889	126047822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126048045_126049276_126049496_126049596_126049723_126051826
ENSMUSG00000030730.13_126047929_126052271_1	chr7	-	670	5	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	10009	2899	10009	-2899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAAGGGTACAGCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	126052271	126047928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126048045_126049276_126049496_126049596_126049723_126051826_126051959_126052194
ENSMUSG00000030730.13_126049342_126055601_1	chr7	-	657	6	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	6679	4312	6679	-4312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGACACGCCCCCCAAACGC	NA	NA	NA	NA	NA	NA	NA	NA	126055601	126049341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126049496_126049596_126049723_126051826_126051959_126052194_126052298_126052533_126052623_126055548
ENSMUSG00000030730.13_126049407_126055655_1	chr7	-	646	6	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	6625	4377	6625	-4377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTGTGATCAAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	126055655	126049406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126049496_126049596_126049723_126051826_126051959_126052194_126052298_126052533_126052623_126055548
ENSMUSG00000030730.13_126049639_126055979_1	chr7	-	663	6	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	6301	4609	6301	-4609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTCACGGGCTGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	126055979	126049638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126049723_126051826_126051959_126052194_126052298_126052533_126052623_126055548_126055716_126055891
ENSMUSG00000030730.13_126051879_126056086_1	chr7	-	634	5	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	6194	6849	6194	-6849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGGAAGTGAGAAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	126056086	126051878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126051959_126052194_126052298_126052533_126052623_126055548_126055716_126055891
ENSMUSG00000030730.13_126052551_126056371_1	chr7	-	623	4	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	5909	7521	5909	-7521	internal_fragment	TRUE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTGAGGGAGAGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	126056371	126052550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126052623_126055548_126055716_126055891_126056190_126056285
ENSMUSG00000030730.13_126055655_126058843_1	chr7	-	619	5	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	3437	10625	3437	-10625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCATCGTGAGGAGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	126058843	126055654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126055716_126055891_126056190_126056285_126056372_126057079_126057161_126058750
ENSMUSG00000030730.13_126056012_126061353_1	chr7	-	666	6	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	927	10982	927	-10982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGGCTTATCAACATT	NA	NA	NA	NA	NA	NA	NA	NA	126061353	126056011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126056190_126056285_126056372_126057079_126057161_126058750_126058890_126059868_126059974_126061276
ENSMUSG00000030730.13_126056132_126062040_1	chr7	-	642	7	NNC	ENSMUSG00000030730.13	novel	3477	23	NA	NA	240	-11102	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGATTGGCAAGATCCGA	NA	NA	NA	NA	NA	NA	NA	NA	126062040	126056131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_126056190_126056285_126056372_126057079_126057161_126058750_126058890_126059868_126059974_126061276_126061360_126061950
ENSMUSG00000030731.14_44034292_44049454_1	chr7	+	2324	10	FSM	ENSMUSG00000030731.14	ENST00000593901.5	2320	10	-4	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACCTGTCTCCCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	44034291	44049454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44034340_44035379_44035546_44039919_44040449_44041822_44042196_44042772_44042992_44044833_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
ENSMUSG00000030733.11_126066542_126067685_1	chr7	-	445	2	ISM	ENSMUSG00000030733.11	ENSMUST00000205733.2	2956	9	6309	371	6309	-365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCAGCCTTAAGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	126067685	126066541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126066946_126067644
ENSMUSG00000030733.11_126066600_126067732_1	chr7	-	434	2	ISM	ENSMUSG00000030733.11	ENSMUST00000205733.2	2956	9	6262	429	6262	-423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCATTAATAATCAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	126067732	126066599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126066946_126067644
ENSMUSG00000030733.11_126066706_126067999_1	chr7	-	481	3	ISM	ENSMUSG00000030733.11	ENSMUST00000205733.2	2956	9	5995	535	5995	-529	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCAGGGTGGTGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	126067999	126066705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126066946_126067644_126067814_126067927
ENSMUSG00000030733.11_126066762_126067620_1	chr7	-	313	3	ISM	ENSMUSG00000030733.11	ENSMUST00000032978.8	3393	10	6655	594	6374	-585	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCTGAGCTGGTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	126067620	126066761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126066946_126067121_126067222_126067591
ENSMUSG00000030733.11_126066770_126068040_1	chr7	-	458	3	ISM	ENSMUSG00000030733.11	ENSMUST00000205733.2	2956	9	5954	599	5954	-593	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCCCCGTGGCTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	126068040	126066769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126066946_126067644_126067814_126067927
ENSMUSG00000030733.11_126066838_126068090_1	chr7	-	440	3	ISM	ENSMUSG00000030733.11	ENSMUST00000205733.2	2956	9	5904	667	5904	-661	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGCCGCAGCAGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	126068090	126066837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126066946_126067644_126067814_126067927
ENSMUSG00000030733.11_126066887_126067754_1	chr7	-	322	3	ISM	ENSMUSG00000030733.11	ENSMUST00000032978.8	3393	10	6521	719	6240	-710	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATCCTGGGGCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	126067754	126066886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126066946_126067121_126067222_126067591
ENSMUSG00000030733.11_126066899_126068311_1	chr7	-	443	4	ISM	ENSMUSG00000030733.11	ENSMUST00000205733.2	2956	9	5683	728	5683	-722	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAGATCCCCCACATCC	NA	NA	NA	NA	NA	NA	NA	NA	126068311	126066898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126066946_126067644_126067814_126067927_126068140_126068296
ENSMUSG00000030733.11_126067182_126067983_1	chr7	-	318	3	ISM	ENSMUSG00000030733.11	ENSMUST00000032978.8	3393	10	6292	1014	6011	-1005	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCGATGCTACCCCGATG	NA	NA	NA	NA	NA	NA	NA	NA	126067983	126067181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126067222_126067591_126067814_126067927
ENSMUSG00000030733.11_126068449_126071269_1	chr7	-	447	5	ISM	ENSMUSG00000030733.11	ENSMUST00000205733.2	2956	9	2725	2278	2725	-2272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCATTGCTGCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	126071269	126068448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244
ENSMUSG00000030733.11_126071964_126074262_1	chr7	-	398	2	ISM	ENSMUSG00000030733.11	ENST00000359285.9	3028	10	30	5791	0	-5787	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTTCGAAGCCGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	126074262	126071963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126072267_126074167
ENSMUSG00000030737.18_99309064_99311685_1	chr7	-	538	4	ISM	ENSMUSG00000030737.18	ENSMUST00000107086.9	3993	14	33331	1468	33331	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGGCCTTGCTTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	99311685	99309063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99309384_99310310_99310432_99310724_99310790_99311653
ENSMUSG00000030737.18_99309064_99311756_1	chr7	-	609	4	ISM	ENSMUSG00000030737.18	ENSMUST00000107086.9	3993	14	33260	1468	33260	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGGCCTTGCTTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	99311756	99309063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99309384_99310310_99310432_99310724_99310790_99311653
ENSMUSG00000030737.18_99309337_99331947_1	chr7	-	1061	8	ISM	ENSMUSG00000030737.18	ENSMUST00000107086.9	3993	14	13069	1741	13069	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1429	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTAGTTTTGGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	99331947	99309336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99309384_99310310_99310432_99310724_99310790_99311653_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901
ENSMUSG00000030737.18_99310311_99332092_1	chr7	-	1159	7	ISM	ENSMUSG00000030737.18	ENSMUST00000107086.9	3993	14	12924	2715	12924	-1025	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCACCAGGGTGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	99332092	99310310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99310432_99310724_99310790_99311653_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901
ENSMUSG00000030737.18_99310725_99334781_1	chr7	-	1137	7	ISM	ENSMUSG00000030737.18	ENSMUST00000107086.9	3993	14	10235	3129	10235	-1439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTGCTTGCCCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	99334781	99310724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99310790_99311653_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99334682
ENSMUSG00000030737.18_99311688_99335114_1	chr7	-	1062	7	ISM	ENSMUSG00000030737.18	ENSMUST00000107086.9	3993	14	9902	4092	9902	-2402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCACACACCTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	99335114	99311687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99334682_99334782_99335090
ENSMUSG00000030737.18_99311747_99335157_1	chr7	-	1046	7	ISM	ENSMUSG00000030737.18	ENSMUST00000107086.9	3993	14	9859	4151	9859	-2461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCGCCTGGTGCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	99335157	99311746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99334682_99334782_99335090
ENSMUSG00000030737.18_99311783_99335223_1	chr7	-	1076	7	ISM	ENSMUSG00000030737.18	ENSMUST00000107086.9	3993	14	9793	4187	9793	-2497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCACTGTTCCTGCAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	99335223	99311782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99334682_99334782_99335090
ENSMUSG00000030737.18_99313984_99335324_1	chr7	-	1144	6	ISM	ENSMUSG00000030737.18	ENSMUST00000107086.9	3993	14	9692	6388	9692	-4698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCCAACCTCCCACACAC	NA	NA	NA	NA	NA	NA	NA	NA	99335324	99313983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99334682_99334782_99335090
ENSMUSG00000030737.18_99314151_99355765_1	chr7	-	1025	7	ISM	ENSMUSG00000030737.18	ENST00000525650.5	1667	11	29	4865	29	-4865	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGCCAGGGCCAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	99355765	99314150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99334682_99334782_99335090_99335325_99355717
ENSMUSG00000030737.18_99331945_99338136_1	chr7	-	548	4	ISM	ENSMUSG00000030737.18	ENSMUST00000107086.9	3993	14	6880	24349	6880	-22659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCGGAAGGTCTTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	99338136	99331944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99332093_99334682_99334782_99335090_99335325_99338069
ENSMUSG00000030737.18_99331948_99338172_1	chr7	-	248	2	ISM	ENSMUSG00000030737.18	ENST00000454962.6	2068	10	17622	23233	6844	-22662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGCGGAAGGTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	99338172	99331947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99332093_99338069
ENSMUSG00000030737.18_99331995_99338197_1	chr7	-	559	4	ISM	ENSMUSG00000030737.18	ENSMUST00000107086.9	3993	14	6819	24399	6819	-22709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTTCTTCCCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	99338197	99331994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99332093_99334682_99334782_99335090_99335325_99338069
ENSMUSG00000030738.12_126145627_126147094_1	chr7	-	1103	5	ISM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	18489	0	18268	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGAGTTTCTAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	126147094	126145626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934
ENSMUSG00000030738.12_126145731_126151231_1	chr7	-	1084	6	ISM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	14352	104	14131	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCATTGAGAAATTATT	NA	NA	NA	NA	NA	NA	NA	NA	126151231	126145730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146
ENSMUSG00000030738.12_126145914_126151427_1	chr7	-	1097	6	ISM	ENSMUSG00000030738.12	ENST00000564243.5	2727	20	13935	-246	13935	246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAACATGTTACAACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	126151427	126145913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146
ENSMUSG00000030738.12_126145983_126151460_1	chr7	-	1061	6	ISM	ENSMUSG00000030738.12	ENST00000564243.5	2727	20	13902	-177	13902	177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACGATGCACTGGACATG	NA	NA	NA	NA	NA	NA	NA	NA	126151460	126145982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146
ENSMUSG00000030738.12_126146160_126156078_1	chr7	-	1356	8	ISM	ENSMUSG00000030738.12	ENST00000564243.5	2727	20	9284	0	9284	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCACCCTGTGAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	126156078	126146159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881
ENSMUSG00000030738.12_126146462_126156584_1	chr7	-	1287	9	ISM	ENSMUSG00000030738.12	ENST00000564243.5	2727	20	8778	302	8778	-302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAACTTGGCTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	126156584	126146461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543
ENSMUSG00000030738.12_126147014_126157866_1	chr7	-	1283	8	ISM	ENSMUSG00000030738.12	ENST00000564243.5	2727	20	7496	854	7496	-854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATCATTAATGAAAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	126157866	126147013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806
ENSMUSG00000030738.12_126151450_126162234_1	chr7	-	1287	10	ISM	ENSMUSG00000030738.12	ENST00000564243.5	2727	20	3128	5290	3128	-5290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGCACACAATGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	126162234	126151449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175
ENSMUSG00000030738.12_126155519_126162818_1	chr7	-	1285	11	ISM	ENSMUSG00000030738.12	ENST00000564243.5	2727	20	2544	9359	2544	-9359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGACCTCATGCTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	126162818	126155518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798
ENSMUSG00000030738.12_126155638_126163649_1	chr7	-	1304	12	ISM	ENSMUSG00000030738.12	ENST00000564243.5	2727	20	1713	9478	1713	-9478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTAATGGAAAGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	126163649	126155637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162895_126163587
ENSMUSG00000030738.12_126155882_126163779_1	chr7	-	1392	11	ISM	ENSMUSG00000030738.12	ENST00000564243.5	2727	20	1583	9722	1583	-9722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGTACTTGGTAATCT	NA	NA	NA	NA	NA	NA	NA	NA	126163779	126155881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162895_126163587
ENSMUSG00000030738.12_126156006_126163940_1	chr7	-	1332	12	ISM	ENSMUSG00000030738.12	ENST00000564243.5	2727	20	1422	9846	1422	-9846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAGAAAGGTACCACTG	NA	NA	NA	NA	NA	NA	NA	NA	126163940	126156005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162895_126163587_126163778_126163874
ENSMUSG00000030738.12_126156372_126165376_1	chr7	-	1364	12	ISM	ENSMUSG00000030738.12	ENST00000564243.5	2727	20	-14	10212	-14	-10212	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAAATACTGATCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	126165376	126156371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162895_126163587_126163778_126163874_126163941_126165250
ENSMUSG00000030738.12_126156382_126163670_1	chr7	-	1085	10	ISM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	1913	10755	1692	-10222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAAATAATGCAAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	126163670	126156381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587
ENSMUSG00000030738.12_126156423_126163738_1	chr7	-	1112	10	ISM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	1845	10796	1624	-10263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCATCCTAACTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	126163738	126156422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587
ENSMUSG00000030738.12_126156626_126163912_1	chr7	-	1091	10	ISM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	1671	10999	1450	-10466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATACGTTGGTTGCACATT	NA	NA	NA	NA	NA	NA	NA	NA	126163912	126156625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874
ENSMUSG00000030738.12_126156916_126165376_1	chr7	-	1141	10	ISM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	207	11289	-14	-10756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCAATATCATTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	126165376	126156915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250
ENSMUSG00000030738.12_126157807_126165530_1	chr7	-	1085	10	ISM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	53	12180	53	-11647	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGTGCACACTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	126165530	126157806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ENSMUSG00000030741.16_125969239_125971943_1	chr7	-	1057	7	ISM	ENSMUSG00000030741.16	ENSMUST00000032994.15	2219	12	4679	7	4347	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	125971943	125969238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916
ENSMUSG00000030741.16_125969239_125976267_1	chr7	-	1635	10	FSM	ENSMUSG00000030741.16	ENST00000352260.11	1652	10	23	-6	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	125976267	125969238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125976008
ENSMUSG00000030741.16_125969239_125976267_2	chr7	-	1628	10	NNC	ENSMUSG00000030741.16	novel	2017	11	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	125976267	125969238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125976015
ENSMUSG00000030741.16_125969239_125976267_3	chr7	-	1630	10	NNC	ENSMUSG00000030741.16	novel	2017	11	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	125976267	125969238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_125969586_125969906_125970079_125970354_125970449_125970712_125970779_125971129_125971320_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125976008
ENSMUSG00000030741.16_125969384_125972091_1	chr7	-	1060	7	ISM	ENSMUSG00000030741.16	ENSMUST00000032994.15	2219	12	4531	152	4199	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGATATCTCCCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	125972091	125969383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916
ENSMUSG00000030741.16_125969517_125973127_1	chr7	-	999	9	ISM	ENSMUSG00000030741.16	ENSMUST00000032994.15	2219	12	3495	285	3163	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGTGTCCAGCGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	125973127	125969516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093
ENSMUSG00000030741.16_125970022_125973239_1	chr7	-	927	8	ISM	ENSMUSG00000030741.16	ENSMUST00000032994.15	2219	12	3383	790	3051	-777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTTCTCGCTCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	125973239	125970021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093
ENSMUSG00000030741.16_125970392_125974370_1	chr7	-	966	8	ISM	ENSMUSG00000030741.16	ENSMUST00000119754.8	2001	11	2213	1153	1920	-1147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCTAGGAGATGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	125974370	125970391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238
ENSMUSG00000030741.16_125970752_125975900_1	chr7	-	930	8	ISM	ENSMUSG00000030741.16	ENSMUST00000119754.8	2001	11	683	1513	390	-1507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCCATGAACTGGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	125975900	125970751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845
ENSMUSG00000030741.16_125971136_125976070_1	chr7	-	970	8	ISM	ENSMUSG00000030741.16	ENSMUST00000119754.8	2001	11	513	1897	220	-1891	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATGTGAGTGGGATACT	NA	NA	NA	NA	NA	NA	NA	NA	125976070	125971135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
ENSMUSG00000030741.16_125971194_125976201_1	chr7	-	1043	8	ISM	ENSMUSG00000030741.16	ENSMUST00000119754.8	2001	11	382	1955	89	-1949	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTCGGCGCCTTTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	125976201	125971193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
ENSMUSG00000030741.16_125971267_125976201_1	chr7	-	970	8	ISM	ENSMUSG00000030741.16	ENSMUST00000119754.8	2001	11	382	2028	89	-2022	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGAGATCAGCCGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	125976201	125971266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
ENSMUSG00000030741.16_125971641_125976379_1	chr7	-	1038	7	ISM	ENSMUSG00000030741.16	ENSMUST00000119754.8	2001	11	204	2402	-89	-2396	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGGGAGAGACTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	125976379	125971640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
ENSMUSG00000030741.16_125971699_125976385_1	chr7	-	986	7	ISM	ENSMUSG00000030741.16	ENSMUST00000119754.8	2001	11	198	2460	-95	-2454	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCACGGGCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	125976385	125971698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
ENSMUSG00000030741.16_125972948_125976583_1	chr7	-	991	5	ISM	ENSMUSG00000030741.16	ENSMUST00000119846.8	2017	11	0	3709	0	-3703	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGGGTGAGTCTGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	125976583	125972947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
ENSMUSG00000030742.8_125963373_125967535_1	chr7	-	449	7	NNC	ENSMUSG00000030742.8	novel	512	8	NA	NA	189	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGAGTGGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	125967535	125963372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_125963440_125963557_125963626_125963730_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470
ENSMUSG00000030742.8_125963373_125967535_2	chr7	-	446	6	NNC	ENSMUSG00000030742.8	novel	512	8	NA	NA	189	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGAGTGGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	125967535	125963372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_125963440_125963557_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967450
ENSMUSG00000030742.8_125963373_125967535_3	chr7	-	461	6	NNC	ENSMUSG00000030742.8	novel	512	8	NA	NA	189	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGAGTGGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	125967535	125963372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_125963440_125963557_125963633_125963730_125963794_125967047_125967143_125967217_125967277_125967433
ENSMUSG00000030742.8_125963373_125967535_4	chr7	-	452	7	NNC	ENSMUSG00000030742.8	novel	512	8	NA	NA	189	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGAGTGGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	125967535	125963372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_125963434_125963555_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470
ENSMUSG00000030742.8_125963373_125967712_1	chr7	-	499	8	NNC	ENSMUSG00000030742.8	novel	512	8	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	865	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGAGTGGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	125967712	125963372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_125963437_125963557_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470_125967536_125967666
ENSMUSG00000030742.8_125963373_125967712_2	chr7	-	499	8	NNC	ENSMUSG00000030742.8	novel	512	8	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGAGTGGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	125967712	125963372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_125963440_125963557_125963626_125963726_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470_125967536_125967666
ENSMUSG00000030742.8_125963373_125967712_3	chr7	-	500	8	NNC	ENSMUSG00000030742.8	novel	512	8	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGAGTGGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	125967712	125963372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_125963440_125963557_125963633_125963730_125963794_125967047_125967143_125967217_125967277_125967357_125967388_125967470_125967536_125967666
ENSMUSG00000030742.8_125963373_125967712_4	chr7	-	497	8	NNC	ENSMUSG00000030742.8	novel	512	8	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGAGTGGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	125967712	125963372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_125963440_125963557_125963633_125963730_125963789_125967047_125967143_125967217_125967279_125967357_125967388_125967470_125967536_125967666
ENSMUSG00000030742.8_125963373_125967712_5	chr7	-	502	8	FSM	ENSMUSG00000030742.8	ENST00000395456.7	512	8	12	-2	12	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGAGTGGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	125967712	125963372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_125963440_125963557_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470_125967536_125967666
ENSMUSG00000030742.8_125963373_125967712_6	chr7	-	478	7	NNC	ENSMUSG00000030742.8	novel	512	8	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGAGTGGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	125967712	125963372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_125963440_125963557_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967464_125967536_125967666
ENSMUSG00000030744.14_99127103_99128678_1	chr7	-	1254	2	ISM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	4267	0	3231	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGAGTATGCAATTATT	NA	NA	NA	NA	NA	NA	NA	NA	99128678	99127102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99128159_99128480
ENSMUSG00000030744.14_99127224_99129131_1	chr7	-	1181	3	ISM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	3814	121	2778	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAACTCTACATGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	99129131	99127223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99128159_99128480_99128678_99129082
ENSMUSG00000030744.14_99127363_99130937_1	chr7	-	1215	4	ISM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	2008	260	972	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAAGCTGTCAGCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	99130937	99127362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903
ENSMUSG00000030744.14_99127434_99130967_1	chr7	-	1174	4	ISM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	1978	331	942	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGCATTTACTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	99130967	99127433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903
ENSMUSG00000030744.14_99127502_99130998_1	chr7	-	1137	4	ISM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	1947	399	911	-391	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGCCTCTGGCGATCC	NA	NA	NA	NA	NA	NA	NA	NA	99130998	99127501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903
ENSMUSG00000030744.14_99127727_99132843_1	chr7	-	1182	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	102	624	0	362	multi-exon	FALSE	canonical	NA	NA	NA	NA	3755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGGAGAGAGTATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	99132843	99127726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ENSMUSG00000030744.14_99127727_99132945_1	chr7	-	1284	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	0	624	0	362	multi-exon	FALSE	canonical	NA	NA	NA	NA	3972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGGAGAGAGTATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	99132945	99127726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ENSMUSG00000030747.6_98803529_98807534_1	chr7	-	757	3	ISM	ENSMUSG00000030747.6	ENST00000376262.7	1359	7	24282	0	24282	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTTATGGGCCTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	98807534	98803528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98803908_98806183_98806387_98807359
ENSMUSG00000030747.6_98803744_98819008_1	chr7	-	1030	7	ISM	ENSMUSG00000030747.6	ENSMUST00000033001.6	2262	8	12918	879	12808	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCAGCTCCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	98819008	98803743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98803908_98806183_98806387_98807359_98807535_98808039_98808245_98813841_98813913_98814288_98814397_98818904
ENSMUSG00000030747.6_98806260_98831621_1	chr7	-	709	6	ISM	ENSMUSG00000030747.6	ENST00000376262.7	1359	7	195	2731	195	-2731	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATGGCCGAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	98831621	98806259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98806387_98807359_98807535_98808039_98808245_98813841_98813913_98814288_98814397_98831598
ENSMUSG00000030747.6_98806330_98831658_1	chr7	-	676	6	ISM	ENSMUSG00000030747.6	ENST00000376262.7	1359	7	158	2801	158	-2801	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGGAGGGTTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	98831658	98806329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98806387_98807359_98807535_98808039_98808245_98813841_98813913_98814288_98814397_98831598
ENSMUSG00000030747.6_98806371_98831723_1	chr7	-	700	6	ISM	ENSMUSG00000030747.6	ENST00000376262.7	1359	7	93	2842	93	-2842	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATTCCTTTGGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	98831723	98806370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98806387_98807359_98807535_98808039_98808245_98813841_98813913_98814288_98814397_98831598
ENSMUSG00000030748.10_125166363_125174973_1	chr7	+	1075	8	ISM	ENSMUSG00000030748.10	ENSMUST00000033004.8	5256	11	15071	3673	15071	-3673	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGAGGCTGCGGCTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	125166362	125174973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_125166470_125168194_125168347_125169113_125169266_125170605_125170763_125172022_125172123_125173809_125173889_125174311_125174362_125174695
ENSMUSG00000030748.10_125168245_125175126_1	chr7	+	1071	7	ISM	ENSMUSG00000030748.10	ENSMUST00000033004.8	5256	11	16953	3520	16953	-3520	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTATCCTGGGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	125168244	125175126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_125168347_125169113_125169266_125170605_125170763_125172022_125172123_125173809_125173889_125174311_125174362_125174695
ENSMUSG00000030750.14_125066812_125070339_1	chr7	-	497	4	ISM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	20429	0	20429	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTGTGTGAGGTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	125070339	125066811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284
ENSMUSG00000030750.14_125066930_125070383_1	chr7	-	423	4	ISM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	20385	118	20385	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCATCGTTCTGGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	125070383	125066929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284
ENSMUSG00000030750.14_125066979_125071103_1	chr7	-	479	5	ISM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	19665	167	19665	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAAGTCGAGCAGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	125071103	125066978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046
ENSMUSG00000030750.14_125067530_125071322_1	chr7	-	427	5	ISM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	19446	718	19446	-718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGGCCAAATACTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	125071322	125067529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279
ENSMUSG00000030750.14_125068286_125085566_1	chr7	-	436	5	ISM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	5202	1474	5202	-1474	internal_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGGAGATGGAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	125085566	125068285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509
ENSMUSG00000030750.14_125070339_125090616_1	chr7	-	472	5	ISM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	152	3527	152	-3527	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGGCCGAGCAGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	125090616	125070338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
ENSMUSG00000030752.9_125051509_125055699_1	chr7	+	654	3	ISM	ENSMUSG00000030752.9	ENSMUST00000033010.9	2389	8	7661	5742	46	-4730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCGATGAGTTCATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	125051508	125055699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_125051901_125054262_125054430_125055604
ENSMUSG00000030752.9_125051729_125060360_1	chr7	+	274	2	FSM	ENSMUSG00000030752.9	ENST00000568965.1	609	2	266	69	266	-69	multi-exon	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACTGGCATTATGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	125051728	125060360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_125051901_125060258
ENSMUSG00000030753.16_98352535_98366106_1	chr7	+	2335	5	FSM	ENSMUSG00000030753.16	ENSMUST00000033009.16	3723	5	225	1163	-63	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGAAGATTTTAAAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	98352534	98366106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188
ENSMUSG00000030753.16_98359380_98364377_1	chr7	+	250	2	FSM	ENSMUSG00000030753.16	ENST00000447914.2	2028	2	47	1731	47	-1729	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGGCTGACGAGGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	98359379	98364377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_98359441_98364188
ENSMUSG00000030759.17_113146666_113167889_1	chr7	+	1551	9	ISM	ENSMUSG00000030759.17	ENSMUST00000164745.8	3972	13	33597	1776	33597	-1776	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTCTTCAATGTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	113146665	113167889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ENSMUSG00000030760.15_97865528_97915454_1	chr7	-	1243	10	NNC	ENSMUSG00000030760.15	novel	1356	11	NA	NA	43215	3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGGATTCTAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	97915454	97865527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_97866098_97867262_97867309_97873118_97873251_97875606_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343
ENSMUSG00000030760.15_97865528_97958713_1	chr7	-	1388	10	NNC	ENSMUSG00000030760.15	novel	1356	11	NA	NA	32	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGGATTCTAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	97958713	97865527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_97866098_97867262_97867309_97873118_97873251_97875605_97875708_97893155_97893215_97906881_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ENSMUSG00000030760.15_97865528_97958713_2	chr7	-	1396	11	NNC	ENSMUSG00000030760.15	novel	1356	11	NA	NA	32	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGGATTCTAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	97958713	97865527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_97866098_97867262_97867309_97873118_97873251_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906978_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ENSMUSG00000030760.15_97865528_97958713_3	chr7	-	1403	11	FSM	ENSMUSG00000030760.15	ENST00000679754.1	1356	11	-44	-3	32	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGGATTCTAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	97958713	97865527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_97866098_97867262_97867309_97873118_97873251_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ENSMUSG00000030760.15_97865528_97958713_4	chr7	-	1397	11	NNC	ENSMUSG00000030760.15	novel	1356	11	NA	NA	32	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGGATTCTAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	97958713	97865527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_97866098_97867262_97867309_97873118_97873251_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910841_97915343_97915455_97958554
ENSMUSG00000030760.15_97865528_97958713_5	chr7	-	1393	10	NNC	ENSMUSG00000030760.15	novel	1356	11	NA	NA	32	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGGATTCTAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	97958713	97865527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_97866098_97867262_97867309_97873118_97873251_97875605_97875708_97893155_97893215_97906876_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ENSMUSG00000030760.15_97865528_97958713_6	chr7	-	1402	11	NNC	ENSMUSG00000030760.15	novel	1356	11	NA	NA	32	3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGGATTCTAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	97958713	97865527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_97866098_97867262_97867309_97873118_97873251_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958555
ENSMUSG00000030760.15_97865650_97958713_1	chr7	-	1281	11	FSM	ENSMUSG00000030760.15	ENST00000679754.1	1356	11	-44	119	32	-119	multi-exon	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTACTGGCAAAATACC	NA	NA	NA	NA	NA	NA	NA	NA	97958713	97865649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_97866098_97867262_97867309_97873118_97873251_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ENSMUSG00000030760.15_97867263_97875707_1	chr7	-	253	3	ISM	ENSMUSG00000030760.15	ENST00000533873.1	740	10	82962	1254	82962	-1254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATGTTGTAAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	97875707	97867262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_97867309_97873118_97873224_97875605
ENSMUSG00000030763.8_122977205_123003707_1	chr7	+	627	5	ISM	ENSMUSG00000030763.8	ENSMUST00000033025.7	1369	11	0	25874	0	-25865	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTATAGCCTGTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	122977204	123003707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645
ENSMUSG00000030763.8_122977393_123017561_1	chr7	+	663	7	ISM	ENSMUSG00000030763.8	ENSMUST00000033025.7	1369	11	188	12020	114	-12011	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTCCTGAGAGGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	122977392	123017561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003708_123009946_123010050_123017440
ENSMUSG00000030763.8_122977393_123029582_1	chr7	+	1182	11	FSM	ENSMUSG00000030763.8	ENSMUST00000033025.7	1369	11	188	-1	114	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTACAATGACATTCT	NA	NA	NA	NA	NA	NA	NA	NA	122977392	123029582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003708_123009946_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
ENSMUSG00000030763.8_122999659_123020862_1	chr7	+	681	7	ISM	ENSMUSG00000030763.8	ENSMUST00000033025.7	1369	11	22454	8719	22380	-8710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGCATCCCCTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	122999658	123020862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_122999753_123000666_123000789_123002057_123002135_123003645_123003708_123009946_123010050_123017440_123017562_123020760
ENSMUSG00000030763.8_123002056_123027414_1	chr7	+	657	7	ISM	ENSMUSG00000030763.8	ENSMUST00000033025.7	1369	11	24851	2167	24777	-2158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGATCCATCGCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	123002055	123027414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_123002135_123003645_123003708_123009946_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316
ENSMUSG00000030763.8_123003663_123029451_1	chr7	+	657	7	ISM	ENSMUSG00000030763.8	ENSMUST00000033025.7	1369	11	26458	130	26384	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTCACTTTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	123003662	123029451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_123003708_123009946_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
ENSMUSG00000030763.8_123010016_123029571_1	chr7	+	663	6	ISM	ENSMUSG00000030763.8	ENSMUST00000206574.2	1286	11	32737	1	32737	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTGCTACATCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	123010015	123029571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
ENSMUSG00000030768.13_182869580_182880553_1	chr1	-	2121	4	ISM	ENSMUSG00000030768.13	ENST00000675961.1	4575	6	36873	1731	36873	-1731	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGATTTCCCACGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	182880553	182869579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483
ENSMUSG00000030768.13_182869781_182881592_1	chr1	-	2090	5	ISM	ENSMUSG00000030768.13	ENST00000675961.1	4575	6	35834	1932	35834	-1932	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGAGGTTTTCGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	182881592	182869780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480
ENSMUSG00000030768.13_182870228_182917375_1	chr1	-	2145	6	FSM	ENSMUSG00000030768.13	ENST00000675961.1	4575	6	51	2379	51	-2379	multi-exon	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACATCGTGTGCGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	182917375	182870227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881638_182916918
ENSMUSG00000030769.16_122813822_122872426_1	chr7	+	2437	16	FSM	ENSMUSG00000030769.16	ENST00000347898.7	2471	16	56	-22	56	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGGTGAGCCAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	122813821	122872426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_122814221_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869227_122872223
ENSMUSG00000030769.16_122813873_122872426_1	chr7	+	2386	16	FSM	ENSMUSG00000030769.16	ENST00000347898.7	2471	16	107	-22	107	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGGTGAGCCAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	122813872	122872426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_122814221_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869227_122872223
ENSMUSG00000030769.16_122814003_122872426_1	chr7	+	2256	16	FSM	ENSMUSG00000030769.16	ENST00000347898.7	2471	16	237	-22	-21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGGTGAGCCAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	122814002	122872426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_122814221_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869227_122872223
ENSMUSG00000030769.16_122814034_122867024_1	chr7	+	1422	12	ISM	ENSMUSG00000030769.16	ENST00000424767.6	2108	15	10	5380	-2	-5380	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCAGCCAGGGAGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	122814033	122867024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_122814221_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971
ENSMUSG00000030769.16_122814034_122867141_1	chr7	+	1539	12	ISM	ENSMUSG00000030769.16	ENST00000424767.6	2108	15	10	5263	-2	-5263	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCTGGACTGGCAACAC	NA	NA	NA	NA	NA	NA	NA	NA	122814033	122867141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_122814221_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971
ENSMUSG00000030769.16_122814034_122872426_1	chr7	+	1786	14	NNC	ENSMUSG00000030769.16	novel	1780	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGGTGAGCCAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	122814033	122872426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_122814221_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122859729_122859866_122864411_122864520_122864885_122864961_122866971_122867141_122868245_122868462_122869063_122869227_122872223
ENSMUSG00000030769.16_122814034_122872426_2	chr7	+	1785	14	NNC	ENSMUSG00000030769.16	novel	1780	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGGTGAGCCAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	122814033	122872426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_122814221_122837353_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122859729_122859866_122864411_122864520_122864879_122864961_122866971_122867141_122868245_122868462_122869063_122869227_122872223
ENSMUSG00000030769.16_122814034_122872426_3	chr7	+	1792	14	FSM	ENSMUSG00000030769.16	ENST00000569071.1	1780	14	10	-22	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGGTGAGCCAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	122814033	122872426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_122814221_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122859729_122859866_122864411_122864520_122864879_122864961_122866971_122867141_122868245_122868462_122869063_122869227_122872223
ENSMUSG00000030769.16_122814034_122872426_4	chr7	+	1787	14	NNC	ENSMUSG00000030769.16	novel	1780	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGGTGAGCCAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	122814033	122872426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_122814221_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122859729_122859866_122864411_122864520_122864879_122864961_122866971_122867141_122868245_122868462_122869068_122869227_122872223
ENSMUSG00000030769.16_122814134_122859811_1	chr7	+	904	9	ISM	ENSMUSG00000030769.16	ENST00000565769.5	2056	15	110	12593	98	-12593	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTTTTCCTGATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	122814133	122859811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_122814221_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729
ENSMUSG00000030769.16_122834843_122868326_1	chr7	+	1410	12	ISM	ENSMUSG00000030769.16	ENST00000424767.6	2108	15	20819	4078	0	-4078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACCAGCCTGATGACCG	NA	NA	NA	NA	NA	NA	NA	NA	122834842	122868326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245
ENSMUSG00000030769.16_122834843_122868344_1	chr7	+	1428	12	ISM	ENSMUSG00000030769.16	ENST00000424767.6	2108	15	20819	4060	0	-4060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCCAGCTGTGGTGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	122834842	122868344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245
ENSMUSG00000030769.16_122834843_122868422_1	chr7	+	1506	12	ISM	ENSMUSG00000030769.16	ENST00000424767.6	2108	15	20819	3982	0	-3982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGAGCTGGTTCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	122834842	122868422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245
ENSMUSG00000030769.16_122838625_122869155_1	chr7	+	1397	11	ISM	ENSMUSG00000030769.16	ENST00000424767.6	2108	15	24601	3249	3782	-3249	internal_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGGACTACAGAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	122838624	122869155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_122838697_122839961_122840022_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063
ENSMUSG00000030770.16_112027112_112187919_1	chr7	+	1275	13	FSM	ENSMUSG00000030770.16	ENSMUST00000033030.14	4454	13	199	2980	199	-258	multi-exon	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCTCTCCCACAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	112027111	112187919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ENSMUSG00000030770.16_112027220_112187983_1	chr7	+	1231	13	FSM	ENSMUSG00000030770.16	ENSMUST00000033030.14	4454	13	307	2916	307	-194	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCACTAACCCAGTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	112027219	112187983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ENSMUSG00000030770.16_112143413_112188177_1	chr7	+	1308	12	ISM	ENSMUSG00000030770.16	ENSMUST00000106640.2	1465	13	24505	0	24505	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCGTGCTCAAGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	112143412	112188177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ENSMUSG00000030770.16_112159147_112188364_1	chr7	+	1249	9	ISM	ENSMUSG00000030770.16	ENSMUST00000106640.2	1465	13	40239	-187	40239	187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGTTCAGACCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	112159146	112188364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ENSMUSG00000030770.16_112159213_112188429_1	chr7	+	1248	9	ISM	ENSMUSG00000030770.16	ENSMUST00000106640.2	1465	13	40305	-252	40305	252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTAGGGCAGGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	112159212	112188429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ENSMUSG00000030770.16_112178860_112188847_1	chr7	+	1279	3	ISM	ENSMUSG00000030770.16	ENSMUST00000106640.2	1465	13	59952	-670	59952	11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTCCTTTTTGCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	112178859	112188847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_112178965_112180156_112180230_112187746
ENSMUSG00000030774.14_97437867_97503743_1	chr7	+	416	2	ISM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	119	57347	119	-57347	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGCAGCAAAGACACTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	97437866	97503743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97438182_97503642
ENSMUSG00000030774.14_97437957_97514697_1	chr7	+	458	3	ISM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	209	46393	209	-46393	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGACCAGAGATTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	97437956	97514697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97438182_97503642_97503857_97514678
ENSMUSG00000030774.14_97438017_97514749_1	chr7	+	450	3	ISM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	269	46341	269	-46341	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTGATGCTGTCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	97438016	97514749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97438182_97503642_97503857_97514678
ENSMUSG00000030774.14_97438156_97515345_1	chr7	+	418	4	ISM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	408	45745	408	-45745	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGGATGTGTTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	97438155	97515345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268
ENSMUSG00000030774.14_97492263_97515364_1	chr7	+	497	4	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	110	46222	110	-45726	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATAACTCTAAGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	97492262	97515364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97492349_97503642_97503857_97514678_97514780_97515268
ENSMUSG00000030774.14_97492316_97515416_1	chr7	+	496	4	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	163	46170	163	-45674	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGAAGATTGTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	97492315	97515416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97492349_97503642_97503857_97514678_97514780_97515268
ENSMUSG00000030774.14_97503649_97532725_1	chr7	+	542	5	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	11496	28861	11496	-28365	internal_fragment	TRUE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAAGATGATGATGACG	NA	NA	NA	NA	NA	NA	NA	NA	97503648	97532725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678
ENSMUSG00000030774.14_97503797_97535545_1	chr7	+	505	6	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	11644	26041	11644	-25545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCGGGATGTGGCTACAT	NA	NA	NA	NA	NA	NA	NA	NA	97503796	97535545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504
ENSMUSG00000030774.14_97515263_97538227_1	chr7	+	548	5	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	23110	23359	23110	-22863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTAGCGGCATTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	97515262	97538227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163
ENSMUSG00000030774.14_97532745_97549593_1	chr7	+	499	6	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	40592	11993	40592	-11497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCCTTGACAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	97532744	97549593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546
ENSMUSG00000030774.14_97535590_97552899_1	chr7	+	490	6	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	43437	8687	43437	-8191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGACAATATTCTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	97535589	97552899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843
ENSMUSG00000030774.14_97538164_97553937_1	chr7	+	537	6	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	46011	7649	46011	-7153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGCAAGGCCTATGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	97538163	97553937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844
ENSMUSG00000030774.14_97547828_97557064_1	chr7	+	482	5	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	55675	4522	55675	-4026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGTCAGCTATTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	97547827	97557064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014
ENSMUSG00000030774.14_97552875_97560586_1	chr7	+	483	4	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	60722	1000	60722	-504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAAATAGGAATTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	97552874	97560586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97552944_97553844_97554042_97557014_97557153_97560507
ENSMUSG00000030774.14_97552926_97560642_1	chr7	+	488	4	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	60773	944	60773	-448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTACCCGAATAAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	97552925	97560642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97552944_97553844_97554042_97557014_97557153_97560507
ENSMUSG00000030774.14_97553953_97560779_1	chr7	+	499	3	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	61800	807	61800	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATTTCTGTGACTAA	NA	NA	NA	NA	NA	NA	NA	NA	97553952	97560779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97554042_97557014_97557153_97560507
ENSMUSG00000030774.14_97557063_97560891_1	chr7	+	474	2	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	64910	695	64910	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGAACCATGCCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	97557062	97560891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97557153_97560507
ENSMUSG00000030774.14_97557097_97560962_1	chr7	+	511	2	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	64944	624	64944	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCAGCTGTTTTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	97557096	97560962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97557153_97560507
ENSMUSG00000030779.17_122584912_122600022_1	chr7	+	942	5	ISM	ENSMUSG00000030779.17	ENST00000381039.7	3371	11	14832	1758	14771	-1758	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAAACCATCGAGTATTA	NA	NA	NA	NA	NA	NA	NA	NA	122584911	122600022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122599806
ENSMUSG00000030779.17_122587923_122600229_1	chr7	+	940	4	ISM	ENSMUSG00000030779.17	ENST00000381039.7	3371	11	17843	1551	17782	-1551	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGGACAACCCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	122587922	122600229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_122587998_122589052_122589157_122589267_122589606_122599806
ENSMUSG00000030779.17_122589353_122600447_1	chr7	+	894	2	ISM	ENSMUSG00000030779.17	ENST00000381039.7	3371	11	19273	1333	19212	-1333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCCAAGCGAAGAGACGAG	NA	NA	NA	NA	NA	NA	NA	NA	122589352	122600447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_122589606_122599806
ENSMUSG00000030779.17_122589353_122600525_1	chr7	+	972	2	ISM	ENSMUSG00000030779.17	ENST00000381039.7	3371	11	19273	1255	19212	-1255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGAAAAGCAAGCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	122589352	122600525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_122589606_122599806
ENSMUSG00000030779.17_122589526_122600666_1	chr7	+	940	2	ISM	ENSMUSG00000030779.17	ENST00000381039.7	3371	11	19446	1114	19385	-1114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCCTGTAGATAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	122589525	122600666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_122589606_122599806
ENSMUSG00000030780.16_127870551_127896748_1	chr7	-	2246	12	ISM	ENSMUSG00000030780.16	ENSMUST00000033044.16	2627	13	594	0	594	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGCTTCATACTGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	127896748	127870550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633
ENSMUSG00000030780.16_127870721_127897267_1	chr7	-	2382	13	FSM	ENSMUSG00000030780.16	ENSMUST00000033044.16	2627	13	75	170	75	-170	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGAGCTCTTCATCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	127897267	127870720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ENSMUSG00000030782.18_127846043_127853928_1	chr7	+	2786	10	FSM	ENSMUSG00000030782.18	ENSMUST00000164710.8	3788	10	59	943	0	-943	multi-exon	FALSE	canonical	NA	NA	NA	NA	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAGAACTAAAATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	127846042	127853928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_127846181_127847591_127847645_127847749_127847893_127848058_127848147_127848261_127848368_127848471_127848667_127851248_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUSG00000030782.18_127847348_127852538_1	chr7	+	1366	10	NNC	ENSMUSG00000030782.18	novel	1373	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCTTGGGATCAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	127847347	127852538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_127847465_127847591_127847645_127847749_127847893_127848058_127848147_127848270_127848368_127848471_127848667_127851248_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUSG00000030782.18_127847348_127852538_2	chr7	+	1370	10	NNC	ENSMUSG00000030782.18	novel	1373	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCTTGGGATCAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	127847347	127852538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_127847465_127847591_127847645_127847754_127847893_127848058_127848147_127848261_127848368_127848471_127848667_127851248_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUSG00000030782.18_127847348_127852538_3	chr7	+	1375	10	FSM	ENSMUSG00000030782.18	ENSMUST00000070656.12	3026	10	1305	346	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCTTGGGATCAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	127847347	127852538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_127847465_127847591_127847645_127847749_127847893_127848058_127848147_127848261_127848368_127848471_127848667_127851248_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUSG00000030782.18_127847348_127852883_1	chr7	+	1713	10	NNC	ENSMUSG00000030782.18	novel	3026	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGCCAGAGAACCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	127847347	127852883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_127847465_127847591_127847645_127847749_127847893_127848058_127848147_127848261_127848368_127848478_127848667_127851248_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUSG00000030782.18_127847348_127852883_2	chr7	+	1720	10	FSM	ENSMUSG00000030782.18	ENSMUST00000070656.12	3026	10	1305	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGCCAGAGAACCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	127847347	127852883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_127847465_127847591_127847645_127847749_127847893_127848058_127848147_127848261_127848368_127848471_127848667_127851248_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUSG00000030782.18_127847348_127852883_3	chr7	+	1715	10	NNC	ENSMUSG00000030782.18	novel	1812	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGCCAGAGAACCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	127847347	127852883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_127847465_127847591_127847645_127847754_127847893_127848058_127848147_127848261_127848368_127848471_127848667_127851248_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUSG00000030782.18_127847590_127852538_1	chr7	+	1253	9	NNC	ENSMUSG00000030782.18	novel	1373	10	NA	NA	242	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCTTGGGATCAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	127847589	127852538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_127847645_127847754_127847893_127848058_127848145_127848261_127848368_127848471_127848667_127851248_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUSG00000030782.18_127851252_127854599_1	chr7	+	2731	4	ISM	ENSMUSG00000030782.18	ENSMUST00000164710.8	3788	10	5268	272	3904	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTTAAAAACATGCAATA	NA	NA	NA	NA	NA	NA	NA	NA	127851251	127854599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUSG00000030782.18_127851278_127854679_1	chr7	+	2785	4	ISM	ENSMUSG00000030782.18	ENSMUST00000164710.8	3788	10	5294	192	3930	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCCAGAAAGACAAACGTG	NA	NA	NA	NA	NA	NA	NA	NA	127851277	127854679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUSG00000030782.18_127851338_127854722_1	chr7	+	2768	4	ISM	ENSMUSG00000030782.18	ENSMUST00000164710.8	3788	10	5354	149	3990	-149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGCTTTTAAGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	127851337	127854722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUSG00000030788.17_110414680_110424543_1	chr7	-	1606	3	ISM	ENSMUSG00000030788.17	ENSMUST00000175981.8	2333	6	12193	327	12193	110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATAAAATCCCTCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	110424543	110414679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110416058_110420460_110420569_110424423
ENSMUSG00000030788.17_110414918_110436355_1	chr7	-	1611	5	ISM	ENSMUSG00000030788.17	ENSMUST00000106682.10	1101	6	6978	-960	381	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTGCAGCCTATAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	110436355	110414917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436283
ENSMUSG00000030788.17_110414978_110436418_1	chr7	-	1614	5	ISM	ENSMUSG00000030788.17	ENSMUST00000106682.10	1101	6	6915	-900	318	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGAGTGCGGCCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	110436418	110414977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436283
ENSMUSG00000030788.17_110415067_110436452_1	chr7	-	1559	5	ISM	ENSMUSG00000030788.17	ENSMUST00000106682.10	1101	6	6881	-811	284	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGCAGTTGTAAAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	110436452	110415066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436283
ENSMUSG00000030795.19_127566629_127580728_1	chr7	+	1609	13	NNC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	0	-473	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGTAAGTCAAAACAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	127566628	127580728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573620_127576386_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582
ENSMUSG00000030795.19_127566680_127581001_1	chr7	+	1613	15	FSM	ENSMUSG00000030795.19	ENSMUST00000106251.10	5536	15	51	3872	0	-200	multi-exon	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCTGAAGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	127566679	127581001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ENSMUSG00000030795.19_127568887_127581021_1	chr7	+	1534	13	NNC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	2207	-180	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTTCCTGTACCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	127568886	127581021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_127569044_127571009_127571155_127571288_127571471_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ENSMUSG00000030795.19_127568887_127581021_2	chr7	+	1523	12	NNC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	2207	-180	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTTCCTGTACCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	127568886	127581021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573620_127576386_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ENSMUSG00000030795.19_127568967_127581179_1	chr7	+	1578	14	NIC	ENSMUSG00000030795.19	novel	1791	16	NA	NA	2287	-22	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAAAACATCATTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	127568966	127581179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962_127581107_127581146
ENSMUSG00000030795.19_127571047_127581204_1	chr7	+	1483	13	NNC	ENSMUSG00000030795.19	novel	1791	16	NA	NA	4367	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	127571046	127581204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_127571155_127571288_127571471_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962_127581107_127581146
ENSMUSG00000030796.18_44865177_44880894_1	chr7	+	1205	10	NNC	ENSMUSG00000030796.18	novel	1427	12	NA	NA	0	-1458	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACCCAGGGCTAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	44865176	44880894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_44865299_44866636_44866875_44867504_44867570_44868567_44868637_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732
ENSMUSG00000030796.18_44866742_44882362_1	chr7	+	1255	11	ISM	ENSMUSG00000030796.18	ENST00000593945.6	1427	12	1524	-10	107	10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCTGGTGTTTTTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	44866741	44882362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44866875_44867504_44867570_44868567_44868637_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ENSMUSG00000030796.18_44866742_44882362_2	chr7	+	1249	11	FSM	ENSMUSG00000030796.18	ENSMUST00000107801.10	3396	11	1466	681	107	10	multi-exon	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCTGGTGTTTTTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	44866741	44882362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ENSMUSG00000030796.18_44868565_44882510_1	chr7	+	1202	9	ISM	ENSMUSG00000030796.18	ENSMUST00000097216.5	1948	11	1930	549	1930	158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAAGCCTGGTTATTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	44868564	44882510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ENSMUSG00000030796.18_44873145_44882709_1	chr7	+	1128	6	ISM	ENSMUSG00000030796.18	ENSMUST00000097216.5	1948	11	6510	350	6510	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTCTTACTGACTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	44873144	44882709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ENSMUSG00000030796.18_44875170_44882816_1	chr7	+	1117	5	ISM	ENSMUSG00000030796.18	ENSMUST00000097216.5	1948	11	8535	243	8535	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTCCCAGCTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	44875169	44882816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ENSMUSG00000030796.18_44878152_44883043_1	chr7	+	1205	4	ISM	ENSMUSG00000030796.18	ENSMUST00000097216.5	1948	11	11517	16	11517	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	44878151	44883043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44878237_44880732_44880895_44881606_44881760_44882238
ENSMUSG00000030801.11_127511791_127519683_1	chr7	+	519	5	ISM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	103	5326	103	-5326	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCCCAAGCTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	127511790	127519683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593
ENSMUSG00000030801.11_127511837_127519702_1	chr7	+	492	5	ISM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	149	5307	149	-5307	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCGAGTACTGCCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	127511836	127519702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593
ENSMUSG00000030801.11_127514436_127521368_1	chr7	+	472	5	ISM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	2748	3641	2748	-3641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATCGAAAGAGCAACATCT	NA	NA	NA	NA	NA	NA	NA	NA	127514435	127521368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330
ENSMUSG00000030801.11_127514655_127523645_1	chr7	+	477	5	ISM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	2967	1364	2967	-1364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTAGATAGGCAAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	127514654	127523645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549
ENSMUSG00000030801.11_127519687_127524042_1	chr7	+	472	5	ISM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	7999	967	7999	-967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGCTACTGGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	127519686	127524042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967
ENSMUSG00000030801.11_127521378_127524315_1	chr7	+	464	5	ISM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	9690	694	9690	-694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCTGCAGTCCCTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	127521377	127524315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280
ENSMUSG00000030801.11_127523803_127524873_1	chr7	+	488	4	ISM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	12115	136	12115	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTACAGACCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	127523802	127524873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127523870_127523967_127524119_127524280_127524436_127524758
ENSMUSG00000030802.15_127503254_127504462_1	chr7	+	520	3	ISM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	0	4931	0	-3318	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGTTCTCTCTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	127503253	127504462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127503342_127503934_127504298_127504393
ENSMUSG00000030802.15_127504392_127505594_1	chr7	+	523	6	ISM	ENSMUSG00000030802.15	ENSMUST00000124533.3	1792	10	458	2186	458	-2186	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGACTAGAATGGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	127504391	127505594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520
ENSMUSG00000030802.15_127505519_127507410_1	chr7	+	526	5	ISM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	2265	1983	1585	-370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGCATTGGCACGGATG	NA	NA	NA	NA	NA	NA	NA	NA	127505518	127507410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
ENSMUSG00000030802.15_127506638_127507591_1	chr7	+	478	3	ISM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	3384	1802	2704	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGACAGGTGGACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	127506637	127507591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127506704_127507092_127507252_127507338
ENSMUSG00000030802.15_127506662_127507672_1	chr7	+	535	3	ISM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	3408	1721	2728	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGAAGCAGGTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	127506661	127507672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127506704_127507092_127507252_127507338
ENSMUSG00000030805.15_127440936_127445448_1	chr7	+	839	7	ISM	ENSMUSG00000030805.15	ENSMUST00000033075.14	1456	11	0	2743	0	-2724	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGCCATAGCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	127440935	127445448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371
ENSMUSG00000030805.15_127441142_127447670_1	chr7	+	882	9	ISM	ENSMUSG00000030805.15	ENSMUST00000121705.8	1316	10	2	502	2	-502	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCTGGCCCCCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	127441141	127447670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559
ENSMUSG00000030805.15_127441431_127447849_1	chr7	+	897	9	ISM	ENSMUSG00000030805.15	ENSMUST00000121705.8	1316	10	291	323	291	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGGCCTGCCCCATCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	127441430	127447849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740
ENSMUSG00000030805.15_127441645_127447989_1	chr7	+	819	9	ISM	ENSMUSG00000030805.15	ENSMUST00000033075.14	1456	11	709	202	505	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGACCTTGTGCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	127441644	127447989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740_127447840_127447922
ENSMUSG00000030805.15_127442770_127448191_1	chr7	+	848	7	ISM	ENSMUSG00000030805.15	ENSMUST00000033075.14	1456	11	1834	0	1630	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTGCAGTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	127442769	127448191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740_127447840_127447922
ENSMUSG00000030814.18_127304150_127307830_1	chr7	-	857	6	FSM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	275	0	-19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCATGTCATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	127307830	127304149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
ENSMUSG00000030814.18_127304150_127307957_1	chr7	-	984	6	FSM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	148	0	-59	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCATGTCATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	127307957	127304149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
ENSMUSG00000030814.18_127304966_127308105_1	chr7	-	867	5	ISM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	0	816	0	-816	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGGTACTGATGAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	127308105	127304965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
ENSMUSG00000030815.12_127176809_127182237_1	chr7	+	1060	8	ISM	ENSMUSG00000030815.12	ENSMUST00000121004.3	1840	9	4108	240	4108	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGAGGACATTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	127176808	127182237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127176883_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ENSMUSG00000030822.16_127070932_127074677_1	chr7	+	1403	7	ISM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	270	1253	270	-1253	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACCCTGTCTCCGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	127070931	127074677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223
ENSMUSG00000030822.16_127071073_127074998_1	chr7	+	1452	8	ISM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	411	932	411	-932	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATGAGTGAGTATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	127071072	127074998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928
ENSMUSG00000030822.16_127071347_127075424_1	chr7	+	1421	9	ISM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	685	506	685	-506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTATACAAATAAGAACTA	NA	NA	NA	NA	NA	NA	NA	NA	127071346	127075424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393
ENSMUSG00000030822.16_127072795_127075589_1	chr7	+	1376	9	ISM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	2133	341	2133	-341	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAATGGAACTCTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	127072794	127075589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
ENSMUSG00000030822.16_127072795_127075680_1	chr7	+	1467	9	ISM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	2133	250	2133	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGGGGTCCGCACCGCA	NA	NA	NA	NA	NA	NA	NA	NA	127072794	127075680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
ENSMUSG00000030822.16_127072795_127075701_1	chr7	+	1488	9	ISM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	2133	229	2133	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCAGAACCCTTACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	127072794	127075701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
ENSMUSG00000030822.16_127073070_127075930_1	chr7	+	1522	8	ISM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	2408	0	2408	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGACTCCTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	127073069	127075930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
ENSMUSG00000030824.18_45141331_45148335_1	chr7	-	966	9	ISM	ENSMUSG00000030824.18	ENST00000407032.5	1310	12	4374	0	4374	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCTACCTGGAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	45148335	45141330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45141356_45143223_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148
ENSMUSG00000030824.18_45142036_45143571_1	chr7	-	1369	2	ISM	ENSMUSG00000030824.18	ENST00000407032.5	1310	12	9138	705	9138	496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGTTCAAGCCAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	45143571	45142035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45143374_45143540
ENSMUSG00000030824.18_45142180_45144091_1	chr7	-	1341	3	ISM	ENSMUSG00000030824.18	ENST00000407032.5	1310	12	8618	849	8618	352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATCAGGAGTTCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	45144091	45142179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45143374_45143540_45143638_45144041
ENSMUSG00000030824.18_45142252_45144138_1	chr7	-	1316	3	ISM	ENSMUSG00000030824.18	ENST00000407032.5	1310	12	8571	921	8571	280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCCACAGTCCACGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	45144138	45142251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45143374_45143540_45143638_45144041
ENSMUSG00000030824.18_45142386_45144551_1	chr7	-	1331	4	ISM	ENSMUSG00000030824.18	ENST00000407032.5	1310	12	8158	1055	8158	146	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCCATGGGAACAGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	45144551	45142385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476
ENSMUSG00000030824.18_45142639_45147887_1	chr7	-	1312	7	ISM	ENSMUSG00000030824.18	ENST00000407032.5	1310	12	4822	1308	4822	-107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCACCAACTTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	45147887	45142638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823
ENSMUSG00000030824.18_45143000_45151045_1	chr7	-	1307	10	ISM	ENSMUSG00000030824.18	ENST00000407032.5	1310	12	1664	1669	1664	-468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACCTGGAGTGCACACT	NA	NA	NA	NA	NA	NA	NA	NA	45151045	45142999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006
ENSMUSG00000030824.18_45143064_45151100_1	chr7	-	1298	10	ISM	ENSMUSG00000030824.18	ENST00000407032.5	1310	12	1609	1733	1609	-532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTCCCTCCCTCCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	45151100	45143063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006
ENSMUSG00000030824.18_45143224_45159162_1	chr7	-	1318	12	ISM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	668	3342	588	-692	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGGAAGCCAGATGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	45159162	45143223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129
ENSMUSG00000030824.18_45143291_45159211_1	chr7	-	1300	12	ISM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	619	3409	539	-759	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCACAGCTGGATTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	45159211	45143290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129
ENSMUSG00000030824.18_45143338_45159266_1	chr7	-	1308	12	ISM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	564	3456	484	-806	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTGCCTGCTTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	45159266	45143337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129
ENSMUSG00000030824.18_45143596_45159813_1	chr7	-	1289	12	ISM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	17	3714	17	-1064	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCGCTCCGCCTTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	45159813	45143595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
ENSMUSG00000030826.20_45219774_45225426_1	chr7	+	329	3	ISM	ENSMUSG00000030826.20	ENSMUST00000120864.10	1536	11	-23	13708	-23	-13708	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACTAGCTGCTTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	45219773	45225426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45219824_45224854_45224930_45225222
ENSMUSG00000030827.6_45263310_45264393_1	chr7	-	529	2	ISM	ENSMUSG00000030827.6	ENSMUST00000033099.6	951	3	521	0	521	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTGAGATATGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	45264393	45263309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45263735_45264289
ENSMUSG00000030827.6_45263459_45264586_1	chr7	-	474	3	FSM	ENSMUSG00000030827.6	ENSMUST00000033099.6	951	3	328	149	328	-149	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATGCGTCCTGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	45264586	45263458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_45263735_45264289_45264394_45264492
ENSMUSG00000030827.6_45263530_45264665_1	chr7	-	482	3	FSM	ENSMUSG00000030827.6	ENSMUST00000033099.6	951	3	249	220	249	-220	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGAGCCCCCAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	45264665	45263529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_45263735_45264289_45264394_45264492
ENSMUSG00000030827.6_45263675_45264789_1	chr7	-	461	3	FSM	ENSMUSG00000030827.6	ENSMUST00000033099.6	951	3	125	365	125	-365	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTACCAGTCTGAAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	45264789	45263674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_45263735_45264289_45264394_45264492
ENSMUSG00000030827.6_45264290_45264914_1	chr7	-	526	2	ISM	ENSMUSG00000030827.6	ENSMUST00000033099.6	951	3	0	980	0	-980	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCTCTTTCTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	45264914	45264289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45264394_45264492
ENSMUSG00000030834.8_45663493_45678594_1	chr7	-	1112	8	NNC	ENSMUSG00000030834.8	novel	1121	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2005	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGCCAGGGGCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	45678594	45663492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_45663671_45664837_45665010_45665802_45665939_45666897_45666960_45667988_45668115_45669561_45669691_45669964_45670091_45678411
ENSMUSG00000030834.8_45663493_45678594_2	chr7	-	1116	8	ISM	ENSMUSG00000030834.8	ENSMUST00000002850.8	4974	31	1132	37689	1	0	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2006	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGCCAGGGGCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	45678594	45663492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45663671_45664837_45665018_45665806_45665939_45666897_45666960_45667988_45668115_45669561_45669691_45669964_45670091_45678411
ENSMUSG00000030834.8_45669650_45678471_1	chr7	-	321	3	ISM	ENSMUSG00000030834.8	ENST00000546162.6	1216	8	124	6158	124	-6157	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCGGTCATCCGGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	45678471	45669649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45669691_45669964_45670185_45678411
ENSMUSG00000030835.7_45683122_45715764_1	chr7	+	2205	18	ISM	ENSMUSG00000030835.7	ENST00000677260.1	3923	30	-38	17714	0	-17381	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2036	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGGCCCCTTCTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	45683121	45715764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585
ENSMUSG00000030835.7_45683241_45694787_1	chr7	+	676	7	ISM	ENSMUSG00000030835.7	ENST00000677260.1	3923	30	81	38691	-34	-38358	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGAAAGGGGTGAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	45683240	45694787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684
ENSMUSG00000030835.7_45683279_45694738_1	chr7	+	482	6	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	4	38407	4	-38407	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGGCTGGCTATAATGT	NA	NA	NA	NA	NA	NA	NA	NA	45683278	45694738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45693654_45693728_45694684
ENSMUSG00000030835.7_45683332_45694790_1	chr7	+	481	6	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	57	38355	57	-38355	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGGGGTGAAGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	45683331	45694790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45693654_45693728_45694684
ENSMUSG00000030835.7_45686981_45695410_1	chr7	+	710	7	ISM	ENSMUSG00000030835.7	ENST00000678192.1	3984	30	3837	38068	3706	-37735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGAGTGGGTGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	45686980	45695410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272
ENSMUSG00000030835.7_45690892_45696422_1	chr7	+	556	5	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	7617	36723	7617	-36723	internal_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCCTCCCAGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	45690891	45696422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45690994_45693654_45693728_45694684_45694838_45695272_45695411_45696332
ENSMUSG00000030835.7_45694683_45720330_1	chr7	+	2171	17	ISM	ENSMUSG00000030835.7	ENST00000677260.1	3923	30	11523	13148	11408	-12815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2916	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCTCCCCAAGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	45694682	45720330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45694838_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198
ENSMUSG00000030835.7_45694709_45703946_1	chr7	+	635	6	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	11434	29199	11434	-29199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCATCGTCCGCTCCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	45694708	45703946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925
ENSMUSG00000030835.7_45694712_45700046_1	chr7	+	537	5	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	11437	33099	11437	-33099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTCTACTTCGAGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	45694711	45700046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969
ENSMUSG00000030835.7_45694772_45704007_1	chr7	+	633	6	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	11497	29138	11497	-29138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAGACAAGGACAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	45694771	45704007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925
ENSMUSG00000030835.7_45695348_45706071_1	chr7	+	638	6	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	12073	27074	12073	-27074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCCCCTCACTGTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	45695347	45706071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018
ENSMUSG00000030835.7_45699692_45706637_1	chr7	+	713	5	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	16417	26508	16417	-26508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGGCCTGATACTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	45699691	45706637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500
ENSMUSG00000030835.7_45706104_45715645_1	chr7	+	634	7	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	22829	17500	22829	-17500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGAGGGAACAGCAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	45706103	45715645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585
ENSMUSG00000030835.7_45706529_45715645_1	chr7	+	549	6	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	23254	17500	23254	-17500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGAGGGAACAGCAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	45706528	45715645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585
ENSMUSG00000030835.7_45710302_45717962_1	chr7	+	711	6	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	27027	15183	27027	-15183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTTCCCAAAGAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	45710301	45717962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802
ENSMUSG00000030835.7_45712391_45717962_1	chr7	+	558	4	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	29116	15183	29116	-15183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTTCCCAAAGAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	45712390	45717962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45712487_45715585_45715805_45715883_45715967_45717802
ENSMUSG00000030835.7_45712391_45718222_1	chr7	+	685	5	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	29116	14923	29116	-14923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGTGCGTCCAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	45712390	45718222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095
ENSMUSG00000030835.7_45715686_45720227_1	chr7	+	632	6	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	32411	12918	32411	-12918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAGGAGTTCCGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	45715685	45720227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198
ENSMUSG00000030835.7_45715749_45720279_1	chr7	+	621	6	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	32474	12866	32474	-12866	internal_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGAACCTGAGGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	45715748	45720279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198
ENSMUSG00000030835.7_45715899_45721978_1	chr7	+	654	6	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	32624	11167	32624	-11167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTGGGGCAGAAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	45715898	45721978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921
ENSMUSG00000030835.7_45717854_45725582_1	chr7	+	704	6	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	34579	7563	34579	-7563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGGCATCACTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	45717853	45725582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498
ENSMUSG00000030835.7_45718089_45727560_1	chr7	+	713	6	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	34814	5585	34814	-5585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAGTCCTGAAAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	45718088	45727560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449
ENSMUSG00000030835.7_45722041_45732715_1	chr7	+	497	6	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	38766	430	38766	-430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCTCCTGTTGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	45722040	45732715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658
ENSMUSG00000030835.7_45725559_45733061_1	chr7	+	485	6	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	42284	84	42284	-84	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGAGTCAGAGCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	45725558	45733061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ENSMUSG00000030835.7_45727489_45733363_1	chr7	+	631	4	ISM	ENSMUSG00000030835.7	ENST00000678192.1	3984	30	44345	115	44214	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGAGTTGAAGATAATT	NA	NA	NA	NA	NA	NA	NA	NA	45727488	45733363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45727561_45728914_45729017_45730818_45730939_45733026
ENSMUSG00000030839.13_46092645_46284980_1	chr7	-	1303	10	ISM	ENSMUSG00000030839.13	ENSMUST00000033127.12	1465	11	4251	67	4251	-67	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGGTGTGAGAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	46284980	46092644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_46092960_46165091_46165129_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844
ENSMUSG00000030839.13_46092765_46289228_1	chr7	-	1275	11	FSM	ENSMUSG00000030839.13	ENSMUST00000033127.12	1465	11	3	187	3	-187	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCACCTGCCCTCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	46289228	46092764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_46092960_46165091_46165129_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46289136
ENSMUSG00000030842.13_101555111_101561110_1	chr7	+	1111	5	NNC	ENSMUSG00000030842.13	novel	1119	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCTGTCCTGCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	101555110	101561110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560487
ENSMUSG00000030842.13_101555111_101561110_2	chr7	+	1110	5	NNC	ENSMUSG00000030842.13	novel	1119	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCTGTCCTGCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	101555110	101561110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_101555248_101558879_101559017_101559235_101559314_101559626_101559754_101560479
ENSMUSG00000030842.13_101555111_101561110_3	chr7	+	1113	5	NNC	ENSMUSG00000030842.13	novel	1119	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCTGTCCTGCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	101555110	101561110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_101555248_101558870_101559017_101559235_101559308_101559626_101559754_101560479
ENSMUSG00000030846.16_128044004_128062933_1	chr7	-	1434	12	FSM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	146	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	128062933	128044003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ENSMUSG00000030847.9_128125340_128148157_1	chr7	+	2014	4	FSM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	0	548	0	-548	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCACTGCGGGACTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	128125339	128148157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_128125769_128141696_128142036_128143530_128143933_128147313
ENSMUSG00000030847.9_128141811_128148705_1	chr7	+	2019	3	ISM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	16471	0	16471	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTGTGGTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	128141810	128148705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_128142036_128143530_128143933_128147313
ENSMUSG00000030849.19_129764242_129784508_1	chr7	-	2584	8	NNC	ENSMUSG00000030849.19	novel	4223	16	NA	NA	26911	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTACAGATATTAATG	NA	NA	NA	NA	NA	NA	NA	NA	129784508	129764241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_129765948_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370
ENSMUSG00000030849.19_129764477_129787014_1	chr7	-	2389	9	NNC	ENSMUSG00000030849.19	novel	2903	15	NA	NA	24405	-235	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTACCCACTTCTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	129787014	129764476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_129765948_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958
ENSMUSG00000030849.19_129764530_129787077_1	chr7	-	2399	9	NNC	ENSMUSG00000030849.19	novel	2903	15	NA	NA	24342	-288	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGGTTGAGAGTCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	129787077	129764529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_129765948_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958
ENSMUSG00000030849.19_129764649_129797985_1	chr7	-	2391	10	NNC	ENSMUSG00000030849.19	novel	4203	16	NA	NA	13434	252	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTCATCACGTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	129797985	129764648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_129765948_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907
ENSMUSG00000030849.19_129764711_129798087_1	chr7	-	2431	10	NNC	ENSMUSG00000030849.19	novel	4203	16	NA	NA	13332	190	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTCCATGGGAATGATA	NA	NA	NA	NA	NA	NA	NA	NA	129798087	129764710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_129765948_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907
ENSMUSG00000030849.19_129764828_129800208_1	chr7	-	2391	11	NNC	ENSMUSG00000030849.19	novel	4203	16	NA	NA	11211	73	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTCAAGAAACCTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	129800208	129764827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_129765948_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148
ENSMUSG00000030849.19_129764890_129800249_1	chr7	-	2370	11	NNC	ENSMUSG00000030849.19	novel	4203	16	NA	NA	11170	11	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTTATTTGTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	129800249	129764889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_129765948_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148
ENSMUSG00000030849.19_129765051_129802903_1	chr7	-	2444	12	NNC	ENSMUSG00000030849.19	novel	4203	16	NA	NA	8516	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAATCATCTATAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	129802903	129765050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_129765948_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148_129800294_129802712
ENSMUSG00000030849.19_129765051_129863587_1	chr7	-	2756	15	FSM	ENSMUSG00000030849.19	ENST00000369060.8	2903	15	147	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAATCATCTATAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	129863587	129765050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_129765854_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129802712_129802904_129820727_129820852_129830352_129830523_129842929_129843008_129844107_129844375_129863478
ENSMUSG00000030849.19_129765338_129830522_1	chr7	-	2451	14	NNC	ENSMUSG00000030849.19	novel	4203	16	NA	NA	-19103	101	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTACAGAGCACAAACGC	NA	NA	NA	NA	NA	NA	NA	NA	129830522	129765337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_129765948_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352
ENSMUSG00000030849.19_129765439_129863587_1	chr7	-	2459	15	NNC	ENSMUSG00000030849.19	novel	4203	16	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGTATGCTGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	129863587	129765438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_129765948_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129863478
ENSMUSG00000030849.19_129765689_129867591_1	chr7	-	2429	16	NNC	ENSMUSG00000030849.19	novel	4203	16	NA	NA	304	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATGTGTCTTCCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	129867591	129765688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_129765948_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129863478_129863740_129867523
ENSMUSG00000030849.19_129765797_129867652_1	chr7	-	2382	16	NNC	ENSMUSG00000030849.19	novel	4203	16	NA	NA	243	-108	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCTCTTGTTCTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	129867652	129765796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_129765948_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129863478_129863740_129867523
ENSMUSG00000030849.19_129765857_129867708_1	chr7	-	2378	16	NNC	ENSMUSG00000030849.19	novel	4203	16	NA	NA	187	-168	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAATACTTGGATCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	129867708	129765856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_129765948_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129863478_129863740_129867523
ENSMUSG00000030849.19_129769458_129867921_1	chr7	-	2475	15	ISM	ENSMUSG00000030849.19	ENST00000356226.8	3528	16	75	4557	0	-3769	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGACTCTCACAACCA	NA	NA	NA	NA	NA	NA	NA	NA	129867921	129769457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129863478_129863740_129867523
ENSMUSG00000030850.18_129995601_129996032_1	chr7	-	215	2	ISM	ENSMUSG00000030850.18	ENST00000540606.6	2132	13	125668	123	125159	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGTTGTAGTGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	129996032	129995600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_129995710_129995926
ENSMUSG00000030850.18_129995653_129996083_1	chr7	-	214	2	ISM	ENSMUSG00000030850.18	ENST00000540606.6	2132	13	125617	175	125108	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCCTTTCCCACAAACC	NA	NA	NA	NA	NA	NA	NA	NA	129996083	129995652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_129995710_129995926
ENSMUSG00000030850.18_130020236_130069056_1	chr7	-	234	3	ISM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	52135	23948	52135	-23948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCCTTCTCTGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	130069056	130020235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130020299_130065860_130065961_130068985
ENSMUSG00000030850.18_130069025_130105489_1	chr7	-	214	3	ISM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	15702	72737	15702	-72737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCATTTCTGTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	130105489	130069024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130069168_130083412_130083446_130105451
ENSMUSG00000030850.18_130069081_130105541_1	chr7	-	210	3	ISM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	15650	72793	15650	-72793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTAGACATTCTCCCGTA	NA	NA	NA	NA	NA	NA	NA	NA	130105541	130069080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130069168_130083412_130083446_130105451
ENSMUSG00000030850.18_130069116_130109234_1	chr7	-	237	4	ISM	ENSMUSG00000030850.18	ENSMUST00000178534.8	1530	12	12457	72828	11957	-72828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGGCTCGATGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	130109234	130069115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130069168_130083412_130083446_130105451_130105581_130109211
ENSMUSG00000030850.18_130109271_130110809_1	chr7	-	232	2	ISM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	10382	112983	10382	-112983	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCACTGGAAGATTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	130110809	130109270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130109430_130110736
ENSMUSG00000030850.18_130109331_130110852_1	chr7	-	215	2	ISM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	10339	113043	10339	-113043	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGGAGGCTCAAGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	130110852	130109330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130109430_130110736
ENSMUSG00000030850.18_130109376_130110910_1	chr7	-	228	2	ISM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	10281	113088	10281	-113088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGGCAAAGATTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	130110910	130109375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130109430_130110736
ENSMUSG00000030851.16_46515847_46527291_1	chr7	+	807	6	FSM	ENSMUSG00000030851.16	ENST00000536880.5	823	6	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTATAAACTCGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	46515846	46527291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_46515951_46519064_46519197_46522335_46522510_46525099_46525218_46525897_46526022_46527136
ENSMUSG00000030851.16_46515847_46527291_2	chr7	+	551	4	FSM	ENSMUSG00000030851.16	ENST00000546146.5	567	4	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTATAAACTCGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	46515846	46527291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_46515951_46522335_46522510_46525099_46525218_46527136
ENSMUSG00000030851.16_46515847_46527291_3	chr7	+	806	6	NNC	ENSMUSG00000030851.16	novel	823	6	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTATAAACTCGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	46515846	46527291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_46515951_46519064_46519197_46522335_46522510_46525100_46525218_46525897_46526022_46527136
ENSMUSG00000030851.16_46515847_46527291_5	chr7	+	801	6	NNC	ENSMUSG00000030851.16	novel	823	6	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTATAAACTCGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	46515846	46527291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_46515951_46519064_46519197_46522335_46522510_46525099_46525218_46525897_46526016_46527136
ENSMUSG00000030852.19_130294495_130366438_1	chr7	+	3619	17	FSM	ENSMUSG00000030852.19	ENST00000260733.7	3606	17	-87	74	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	130294494	130366438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_130294718_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130346256_130346347_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUSG00000030852.19_130294625_130366493_1	chr7	+	3544	17	FSM	ENSMUSG00000030852.19	ENST00000260733.7	3606	17	43	19	43	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	2233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTCTTTGAGTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	130294624	130366493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_130294718_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130346256_130346347_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUSG00000030852.19_130294650_130342684_1	chr7	+	1987	8	ISM	ENSMUSG00000030852.19	ENST00000369004.7	3627	17	140	23831	68	-20495	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGACGTGTACGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	130294649	130342684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130294718_130318432_130318570_130330252_130331559_130333260_130333297_130335235_130335297_130336678_130336881_130341541_130341604_130342569
ENSMUSG00000030852.19_130294701_130366514_1	chr7	+	3489	17	FSM	ENSMUSG00000030852.19	ENST00000260733.7	3606	17	119	-2	119	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	130294700	130366514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_130294718_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130346256_130346347_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUSG00000030852.19_130318429_130366514_1	chr7	+	3473	16	NNC	ENSMUSG00000030852.19	novel	3940	18	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	130318428	130366514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130346259_130346347_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUSG00000030852.19_130318474_130343926_1	chr7	+	1946	8	ISM	ENSMUSG00000030852.19	ENST00000369004.7	3627	17	23964	22589	43	-19253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGCCCTCCAGTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	130318473	130343926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130318570_130330252_130331559_130333260_130333297_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859
ENSMUSG00000030852.19_130318481_130330404_1	chr7	+	320	2	ISM	ENSMUSG00000030852.19	ENST00000369001.5	3323	14	50	36111	50	-32775	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCATCGAGCTGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	130318480	130330404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130318570_130330173
ENSMUSG00000030852.19_130330250_130344031_1	chr7	+	1958	7	ISM	ENSMUSG00000030852.19	ENST00000369004.7	3627	17	35740	22484	11819	-19148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTGCCTGAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	130330249	130344031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130331559_130333260_130333297_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859
ENSMUSG00000030852.19_130330480_130353593_1	chr7	+	2043	10	ISM	ENSMUSG00000030852.19	ENST00000369004.7	3627	17	35970	12922	12049	-9586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGGGATAAATATGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	130330479	130353593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130331559_130333260_130333297_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130352919_130353064_130353563
ENSMUSG00000030852.19_130330700_130360914_1	chr7	+	1934	12	ISM	ENSMUSG00000030852.19	ENST00000369004.7	3627	17	36190	5601	12269	-2265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCTCCCACCAAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	130330699	130360914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130331559_130333260_130333297_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130352919_130353064_130353563_130353641_130355347_130355392_130360894
ENSMUSG00000030852.19_130330755_130360966_1	chr7	+	1931	12	ISM	ENSMUSG00000030852.19	ENST00000369004.7	3627	17	36245	5549	12324	-2213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGACCTGAACTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	130330754	130360966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130331559_130333260_130333297_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130352919_130353064_130353563_130353641_130355347_130355392_130360894
ENSMUSG00000030852.19_130330860_130361281_1	chr7	+	1933	13	ISM	ENSMUSG00000030852.19	ENST00000369004.7	3627	17	36350	5234	12429	-1898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCGCAGGAGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	130330859	130361281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130331559_130333260_130333297_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263
ENSMUSG00000030852.19_130330922_130361325_1	chr7	+	1915	13	ISM	ENSMUSG00000030852.19	ENST00000369004.7	3627	17	36412	5190	12491	-1854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTACCAGGCCCTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	130330921	130361325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130331559_130333260_130333297_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263
ENSMUSG00000030852.19_130330981_130361368_1	chr7	+	1899	13	ISM	ENSMUSG00000030852.19	ENST00000369004.7	3627	17	36471	5147	12550	-1811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAACTCACCGCTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	130330980	130361368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130331559_130333260_130333297_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263
ENSMUSG00000030852.19_130331113_130361765_1	chr7	+	1890	14	ISM	ENSMUSG00000030852.19	ENST00000369004.7	3627	17	36603	4750	12682	-1414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGAGGGTGGGGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	130331112	130361765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130331559_130333260_130333297_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644
ENSMUSG00000030852.19_130331287_130366199_1	chr7	+	1932	15	ISM	ENSMUSG00000030852.19	ENST00000369004.7	3627	17	36777	316	12856	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCCGAGACCTACCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	130331286	130366199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130331559_130333260_130333297_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUSG00000030852.19_130333261_130366454_1	chr7	+	1915	14	ISM	ENSMUSG00000030852.19	ENST00000369004.7	3627	17	38751	61	14830	16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGCATGTTTCAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	130333260	130366454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130333297_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUSG00000030852.19_130342570_130366131_1	chr7	+	1319	11	NNC	ENSMUSG00000030852.19	novel	3475	16	NA	NA	24139	-307	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCTCCTTTCACTTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	130342569	130366131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_130342686_130343859_130344032_130345273_130345415_130346256_130346347_130352919_130353064_130353563_130353641_130355347_130355392_130360896_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUSG00000030852.19_130345310_130366438_1	chr7	+	1302	9	NNC	ENSMUSG00000030852.19	novel	9029	22	NA	NA	26879	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	130345309	130366438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_130345415_130346256_130346347_130352919_130353064_130353563_130353641_130355347_130355392_130360896_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUSG00000030861.16_131012432_131046056_1	chr7	+	1362	11	FSM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	102	4617	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGTCACTGACAAACCATT	NA	NA	NA	NA	NA	NA	NA	NA	131012431	131046056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ENSMUSG00000030861.16_131026220_131046056_1	chr7	+	1154	9	NNC	ENSMUSG00000030861.16	novel	1178	9	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGTCACTGACAAACCATT	NA	NA	NA	NA	NA	NA	NA	NA	131026219	131046056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_131026361_131030157_131030365_131031675_131031847_131033665_131033796_131036005_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ENSMUSG00000030861.16_131026220_131046056_2	chr7	+	1156	9	NNC	ENSMUSG00000030861.16	novel	1178	9	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGTCACTGACAAACCATT	NA	NA	NA	NA	NA	NA	NA	NA	131026219	131046056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_131026361_131030157_131030365_131031675_131031847_131033666_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ENSMUSG00000030861.16_131026220_131046056_3	chr7	+	1157	9	FSM	ENSMUSG00000030861.16	ENST00000368869.8	1178	9	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGTCACTGACAAACCATT	NA	NA	NA	NA	NA	NA	NA	NA	131026219	131046056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_131026361_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ENSMUSG00000030861.16_131026220_131046056_4	chr7	+	1153	9	NNC	ENSMUSG00000030861.16	novel	1178	9	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGTCACTGACAAACCATT	NA	NA	NA	NA	NA	NA	NA	NA	131026219	131046056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_131026361_131030157_131030365_131031679_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ENSMUSG00000030861.16_131026251_131046175_1	chr7	+	1346	10	ISM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	13921	4498	52	119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAATCTACTCTAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	131026250	131046175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ENSMUSG00000030861.16_131030313_131046492_1	chr7	+	1297	8	ISM	ENSMUSG00000030861.16	ENST00000368869.8	1178	9	4114	-436	4114	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAATAAAAAGTGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	131030312	131046492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ENSMUSG00000030861.16_131031694_131046690_1	chr7	+	1425	7	ISM	ENSMUSG00000030861.16	ENST00000368869.8	1178	9	5495	-634	5495	198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCTAATCATCTGAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	131031693	131046690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ENSMUSG00000030861.16_131042939_131047086_1	chr7	+	1351	3	ISM	ENSMUSG00000030861.16	ENST00000368869.8	1178	9	16740	-1030	16740	594	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTACAGTCGGGAGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	131042938	131047086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_131043069_131045197_131045298_131045965
ENSMUSG00000030861.16_131043019_131047169_1	chr7	+	1354	3	ISM	ENSMUSG00000030861.16	ENST00000368869.8	1178	9	16820	-1113	16820	677	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCCAGAGGAAACATCAC	NA	NA	NA	NA	NA	NA	NA	NA	131043018	131047169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_131043069_131045197_131045298_131045965
ENSMUSG00000030867.8_121758730_121768723_1	chr7	+	1758	10	FSM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	68	373	68	-373	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGCCAGCCGCCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	121758729	121768723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
ENSMUSG00000030867.8_121758804_121768825_1	chr7	+	1786	10	FSM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	142	271	142	-271	multi-exon	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACTGGTGCCCCTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	121758803	121768825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
ENSMUSG00000030867.8_121758804_121768876_1	chr7	+	1837	10	FSM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	142	220	142	-220	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGCTGCTGTTCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	121758803	121768876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
ENSMUSG00000030867.8_121758804_121768916_1	chr7	+	1877	10	FSM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	142	180	142	-180	multi-exon	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGCAGGGCCCCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	121758803	121768916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
ENSMUSG00000030867.8_121758970_121768986_1	chr7	+	1781	10	FSM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	308	110	308	-110	multi-exon	FALSE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCTTCCCTGCCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	121758969	121768986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
ENSMUSG00000030867.8_121759064_121769096_1	chr7	+	1797	10	FSM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	402	0	402	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTCTCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	121759063	121769096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
ENSMUSG00000030867.8_121759076_121769096_1	chr7	+	1785	10	FSM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	414	0	414	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTCTCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	121759075	121769096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
ENSMUSG00000030868.7_121732264_121747804_1	chr7	+	1069	6	FSM	ENSMUSG00000030868.7	ENSMUST00000033156.5	1532	6	0	463	0	-463	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCCTGTGGTTCTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	121732263	121747804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121743007_121743111_121747279
ENSMUSG00000030868.7_121733396_121747986_1	chr7	+	1106	5	ISM	ENSMUSG00000030868.7	ENSMUST00000033156.5	1532	6	1132	281	1132	-281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTTGTGCCCTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	121733395	121747986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_121733461_121734274_121734394_121737470_121737583_121743007_121743111_121747279
ENSMUSG00000030868.7_121733430_121748066_1	chr7	+	1152	5	ISM	ENSMUSG00000030868.7	ENSMUST00000033156.5	1532	6	1166	201	1166	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACGTATACCCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	121733429	121748066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_121733461_121734274_121734394_121737470_121737583_121743007_121743111_121747279
ENSMUSG00000030868.7_121737470_121748267_1	chr7	+	1204	3	ISM	ENSMUSG00000030868.7	ENSMUST00000033156.5	1532	6	5206	0	5206	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTAGGCTCATTCATT	NA	NA	NA	NA	NA	NA	NA	NA	121737469	121748267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_121737583_121743007_121743111_121747279
ENSMUSG00000030869.12_121689442_121690909_1	chr7	-	846	2	ISM	ENSMUSG00000030869.12	ENSMUST00000123296.8	1416	5	10165	163	10165	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGATTATAGGTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	121690909	121689441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_121690187_121690808
ENSMUSG00000030869.12_121689583_121695954_1	chr7	-	915	4	ISM	ENSMUSG00000030869.12	ENSMUST00000123296.8	1416	5	5120	304	5120	-304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGACCCCTTCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	121695954	121689582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_121690187_121690808_121690909_121692839_121692928_121695831
ENSMUSG00000030869.12_121689748_121700930_1	chr7	-	803	5	FSM	ENSMUSG00000030869.12	ENSMUST00000123296.8	1416	5	144	469	144	-469	multi-exon	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGCCCTGGCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	121700930	121689747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_121690187_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ENSMUSG00000030869.12_121689748_121701051_1	chr7	-	924	5	FSM	ENSMUSG00000030869.12	ENSMUST00000123296.8	1416	5	23	469	23	-469	multi-exon	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGCCCTGGCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	121701051	121689747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_121690187_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ENSMUSG00000030870.13_121666670_121667131_1	chr7	+	283	2	ISM	ENSMUSG00000030870.13	ENST00000567264.1	641	4	3	1226	3	-1226	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTGGAACAAGACCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	121666669	121667131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_121666708_121666886
ENSMUSG00000030870.13_121667050_121668068_1	chr7	+	232	2	ISM	ENSMUSG00000030870.13	ENST00000567264.1	641	4	383	289	383	-289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAAAAGTGACCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	121667049	121668068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_121667217_121668003
ENSMUSG00000030873.10_121498451_121516798_1	chr7	+	1466	11	ISM	ENSMUSG00000030873.10	ENST00000568923.5	1843	12	-3	483	-3	-483	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTGGGTGTGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	121498450	121516798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_121498773_121501497_121501766_121502003_121502114_121509622_121509727_121511188_121511353_121511627_121511736_121513434_121513553_121514493_121514570_121514948_121515007_121515748_121515811_121516722
ENSMUSG00000030873.10_121498607_121516974_1	chr7	+	1383	12	FSM	ENSMUSG00000030873.10	ENST00000568923.5	1843	12	153	307	153	-307	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGGGAGATCATTATC	NA	NA	NA	NA	NA	NA	NA	NA	121498606	121516974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_121498773_121501497_121501766_121502003_121502114_121509622_121509727_121511188_121511353_121511627_121511736_121513434_121513553_121514493_121514570_121514948_121515007_121515748_121515811_121516722_121516799_121516901
ENSMUSG00000030873.10_121498653_121517043_1	chr7	+	1406	12	FSM	ENSMUSG00000030873.10	ENST00000568923.5	1843	12	199	238	199	-238	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCAGGAGGCGGCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	121498652	121517043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_121498773_121501497_121501766_121502003_121502114_121509622_121509727_121511188_121511353_121511627_121511736_121513434_121513553_121514493_121514570_121514948_121515007_121515748_121515811_121516722_121516799_121516901
ENSMUSG00000030873.10_121498717_121517082_1	chr7	+	1381	12	FSM	ENSMUSG00000030873.10	ENST00000568923.5	1843	12	263	199	263	-199	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCACTGTGGCTGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	121498716	121517082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_121498773_121501497_121501766_121502003_121502114_121509622_121509727_121511188_121511353_121511627_121511736_121513434_121513553_121514493_121514570_121514948_121515007_121515748_121515811_121516722_121516799_121516901
ENSMUSG00000030873.10_121501613_121517281_1	chr7	+	1408	11	NNC	ENSMUSG00000030873.10	novel	1843	12	NA	NA	3159	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCCACCCCCACCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	121501612	121517281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_121501766_121502003_121502114_121509622_121509727_121511188_121511353_121511627_121511736_121513435_121513553_121514493_121514570_121514948_121515007_121515748_121515811_121516722_121516799_121516901
ENSMUSG00000030873.10_121501630_121517272_1	chr7	+	1383	11	ISM	ENSMUSG00000030873.10	ENST00000568923.5	1843	12	3176	9	3176	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCATCTAGATCCCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	121501629	121517272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_121501766_121502003_121502114_121509622_121509727_121511188_121511353_121511627_121511736_121513434_121513553_121514493_121514570_121514948_121515007_121515748_121515811_121516722_121516799_121516901
ENSMUSG00000030873.10_121501725_121517281_1	chr7	+	1297	11	ISM	ENSMUSG00000030873.10	ENST00000568923.5	1843	12	3271	0	3271	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCCACCCCCACCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	121501724	121517281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_121501766_121502003_121502114_121509622_121509727_121511188_121511353_121511627_121511736_121513434_121513553_121514493_121514570_121514948_121515007_121515748_121515811_121516722_121516799_121516901
ENSMUSG00000030876.8_120633668_120651414_1	chr7	+	827	3	ISM	ENSMUSG00000030876.8	ENSMUST00000033163.8	1823	5	0	24644	0	-24644	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGATGGAGAAGTCACGA	NA	NA	NA	NA	NA	NA	NA	NA	120633667	120651414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120634199_120647060_120647252_120651309
ENSMUSG00000030876.8_120633897_120656477_1	chr7	+	743	4	ISM	ENSMUSG00000030876.8	ENSMUST00000033163.8	1823	5	229	19581	229	-19581	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTCATCAGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	120633896	120656477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437
ENSMUSG00000030876.8_120634041_120675440_1	chr7	+	832	5	FSM	ENSMUSG00000030876.8	ENSMUST00000033163.8	1823	5	373	618	373	-618	multi-exon	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAAAGCCGGCTTTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	120634040	120675440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675352
ENSMUSG00000030876.8_120634096_120675440_1	chr7	+	777	5	FSM	ENSMUSG00000030876.8	ENSMUST00000033163.8	1823	5	428	618	428	-618	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAAAGCCGGCTTTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	120634095	120675440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675352
ENSMUSG00000030876.8_120634143_120675475_1	chr7	+	765	5	FSM	ENSMUSG00000030876.8	ENSMUST00000033163.8	1823	5	475	583	475	-583	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCCATACCTGTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	120634142	120675475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675352
ENSMUSG00000030876.8_120651355_120675741_1	chr7	+	739	3	ISM	ENSMUSG00000030876.8	ENSMUST00000033163.8	1823	5	17687	317	17687	-317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTCTTTGTGTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	120651354	120675741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120651520_120656437_120656623_120675352
ENSMUSG00000030876.8_120656480_120675951_1	chr7	+	742	2	ISM	ENSMUSG00000030876.8	ENSMUST00000033163.8	1823	5	22812	107	22812	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTGGTTATAAAGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	120656479	120675951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120656623_120675352
ENSMUSG00000030877.12_120588260_120590496_1	chr7	+	243	2	ISM	ENSMUSG00000030877.12	ENST00000420133.2	1087	3	51	4262	51	-4262	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCCCTGCTTGGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	120588259	120590496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120588359_120590352
ENSMUSG00000030877.12_120588303_120590554_1	chr7	+	258	2	ISM	ENSMUSG00000030877.12	ENST00000420133.2	1087	3	94	4204	94	-4204	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAACACTATAGAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	120588302	120590554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120588359_120590352
ENSMUSG00000030877.12_120591046_120594758_1	chr7	+	244	2	ISM	ENSMUSG00000030877.12	ENST00000420133.2	1087	3	2837	0	2837	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAAATGCCAGGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	120591045	120594758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120591134_120594602
ENSMUSG00000030879.11_105458418_105460165_1	chr7	-	1154	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	141	6005	38	469	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGTTGGAATTCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	105460165	105458417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_105459352_105459656_105459726_105460014
ENSMUSG00000030879.11_105458475_105460203_1	chr7	-	1135	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	103	6062	0	412	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTGATTCCAAACCATC	NA	NA	NA	NA	NA	NA	NA	NA	105460203	105458474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_105459352_105459656_105459726_105460014
ENSMUSG00000030880.15_120517007_120533111_1	chr7	+	990	12	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	-2	11867	0	-11867	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGCTGATCAGATTAAG	NA	NA	NA	NA	NA	NA	NA	NA	120517006	120533111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055
ENSMUSG00000030880.15_120522120_120534116_1	chr7	+	1022	12	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	5111	10862	5095	-10862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTGCTTGGGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	120522119	120534116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995
ENSMUSG00000030880.15_120526165_120536907_1	chr7	+	983	11	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	9156	8071	9140	-8071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATCTAGGCTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	120526164	120536907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825
ENSMUSG00000030880.15_120527169_120538390_1	chr7	+	934	12	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	10160	6588	10144	-6588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCACATGGCTGTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	120527168	120538390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361
ENSMUSG00000030880.15_120527651_120538519_1	chr7	+	1005	11	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	10642	6459	10626	-6459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGCTTGTGGGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	120527650	120538519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361
ENSMUSG00000030880.15_120531380_120539688_1	chr7	+	967	10	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	14371	5290	14355	-5290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGCCGATGGGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	120531379	120539688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524
ENSMUSG00000030880.15_120531448_120539723_1	chr7	+	934	10	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	14439	5255	14423	-5255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAGCCCATGGACACTG	NA	NA	NA	NA	NA	NA	NA	NA	120531447	120539723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524
ENSMUSG00000030880.15_120534053_120540048_1	chr7	+	950	6	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	17044	4930	17028	-4930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAAAACCTGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	120534052	120540048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524
ENSMUSG00000030880.15_120536824_120541790_1	chr7	+	966	6	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	19815	3188	19799	-3188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGTGCTTTTTTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	120536823	120541790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712
ENSMUSG00000030880.15_120538219_120543896_1	chr7	+	946	6	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	21210	1082	21194	-1082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCCATTGTGAACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	120538218	120543896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543832
ENSMUSG00000030880.15_120538406_120544775_1	chr7	+	918	6	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	21397	203	21381	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGACGAATCCAAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	120538405	120544775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543832_120543896_120544698
ENSMUSG00000030880.15_120538453_120544857_1	chr7	+	953	6	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	21444	121	21428	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGGTGGCCTGTGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	120538452	120544857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543832_120543896_120544698
ENSMUSG00000030880.15_120539952_120544775_1	chr7	+	378	4	ISM	ENSMUSG00000030880.15	ENST00000418581.6	2514	20	22927	326	22927	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGACGAATCCAAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	120539951	120544775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120540049_120541712_120541791_120543769_120543896_120544698
ENSMUSG00000030881.16_105285138_105287109_1	chr7	-	880	4	ISM	ENSMUSG00000030881.16	ENST00000423813.6	1404	7	2512	0	2414	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTATCCCCAGCTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	105287109	105285137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025
ENSMUSG00000030881.16_105285374_105288312_1	chr7	-	998	6	ISM	ENSMUSG00000030881.16	ENSMUST00000209550.2	1141	8	1211	-58	1211	58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGATGTCCTTTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	105288312	105285373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215
ENSMUSG00000030881.16_105285435_105288282_1	chr7	-	788	5	ISM	ENSMUSG00000030881.16	ENST00000445086.6	1320	6	1281	390	1241	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAACTTGGCTATCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	105288282	105285434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105288215
ENSMUSG00000030881.16_105285537_105289521_1	chr7	-	905	7	FSM	ENSMUSG00000030881.16	ENST00000423813.6	1404	7	100	399	2	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGAAACAGCTGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	105289521	105285536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105289451
ENSMUSG00000030881.16_105285545_105289515_1	chr7	-	772	6	FSM	ENSMUSG00000030881.16	ENST00000445086.6	1320	6	48	500	8	-110	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTGGGAACCAGAAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	105289515	105285544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105288215_105288313_105289451
ENSMUSG00000030881.16_105286395_105289533_1	chr7	-	826	7	FSM	ENSMUSG00000030881.16	ENST00000525235.1	851	7	1	24	0	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACACACTGGTCACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	105289533	105286394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_105286486_105286858_105286933_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
ENSMUSG00000030881.16_105286395_105289533_2	chr7	-	825	7	NNC	ENSMUSG00000030881.16	novel	851	7	NA	NA	0	-24	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	830	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACACACTGGTCACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	105289533	105286394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_105286486_105286858_105286933_105287026_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
ENSMUSG00000030884.13_120234399_120258282_1	chr7	+	1431	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	0	465	0	-465	multi-exon	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGTGGAAACTTGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	120234398	120258282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ENSMUSG00000030884.13_120234463_120258349_1	chr7	+	1434	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	64	398	64	-398	multi-exon	FALSE	canonical	NA	NA	NA	NA	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCAGACCAGCAAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	120234462	120258349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ENSMUSG00000030884.13_120234486_120258406_1	chr7	+	1468	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	87	341	87	-341	multi-exon	FALSE	canonical	NA	NA	NA	NA	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACATTTTCTCAATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	120234485	120258406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ENSMUSG00000030884.13_120236936_120258542_1	chr7	+	1493	13	ISM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	2537	205	2537	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCTTTAAGGAAAACAATA	NA	NA	NA	NA	NA	NA	NA	NA	120236935	120258542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ENSMUSG00000030884.13_120239456_120258747_1	chr7	+	1516	11	ISM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	5057	0	5057	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATCCTCTCAGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	120239455	120258747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ENSMUSG00000030888.15_105381611_105382629_1	chr7	-	811	2	ISM	ENSMUSG00000030888.15	ENSMUST00000098148.6	2216	7	3963	0	3359	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCCTCCTGATTATTGG	NA	NA	NA	NA	NA	NA	NA	NA	105382629	105381610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105382351_105382558
ENSMUSG00000030888.15_105381847_105383042_1	chr7	-	776	4	ISM	ENSMUSG00000030888.15	ENSMUST00000098148.6	2216	7	3550	236	2946	-236	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTCTGCTCCTTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	105383042	105381846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974
ENSMUSG00000030888.15_105382041_105383325_1	chr7	-	763	5	ISM	ENSMUSG00000030888.15	ENSMUST00000098148.6	2216	7	3267	430	2663	-430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTCAAGAATGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	105383325	105382040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206
ENSMUSG00000030888.15_105382213_105383531_1	chr7	-	797	5	ISM	ENSMUSG00000030888.15	ENSMUST00000098148.6	2216	7	3061	602	2457	-602	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGAGAGCTCAGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	105383531	105382212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206
ENSMUSG00000030888.15_105382594_105383660_1	chr7	-	753	4	ISM	ENSMUSG00000030888.15	ENSMUST00000098148.6	2216	7	2932	983	2328	-983	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACCAAACTCGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	105383660	105382593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105382656_105382738_105382846_105382974_105383105_105383206
ENSMUSG00000030888.15_105382783_105384033_1	chr7	-	784	4	ISM	ENSMUSG00000030888.15	ENSMUST00000098148.6	2216	7	2559	1172	1955	-1172	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGGACTTCCTTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	105384033	105382782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105382846_105382974_105383105_105383206_105383661_105383896
ENSMUSG00000030888.15_105382833_105384093_1	chr7	-	794	4	ISM	ENSMUSG00000030888.15	ENSMUST00000098148.6	2216	7	2499	1222	1895	-1222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATCTGTAGATGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	105384093	105382832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105382846_105382974_105383105_105383206_105383661_105383896
ENSMUSG00000030888.15_105383333_105385580_1	chr7	-	771	3	ISM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	408	2396	408	-1722	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCCGACGCCTATTCC	NA	NA	NA	NA	NA	NA	NA	NA	105385580	105383332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105383661_105383896_105384264_105385504
ENSMUSG00000030888.15_105383477_105385745_1	chr7	-	792	3	ISM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	243	2540	243	-1866	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGAGGAGACTGAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	105385745	105383476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105383661_105383896_105384264_105385504
ENSMUSG00000030888.15_105383520_105385814_1	chr7	-	818	3	ISM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	174	2583	174	-1909	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGCCACTCCAGACACCA	NA	NA	NA	NA	NA	NA	NA	NA	105385814	105383519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105383661_105383896_105384264_105385504
ENSMUSG00000030889.15_120398247_120399693_1	chr7	+	427	3	ISM	ENSMUSG00000030889.15	ENSMUST00000167213.9	4148	33	58977	5071	18	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1744	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAACGACAGCAGAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	120398246	120399693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120398377_120398727_120398873_120399541
ENSMUSG00000030889.15_120398306_120399693_1	chr7	+	365	3	NNC	ENSMUSG00000030889.15	novel	449	3	NA	NA	77	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAACGACAGCAGAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	120398305	120399693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_120398370_120398727_120398877_120399541
ENSMUSG00000030890.17_105385799_105390690_1	chr7	+	901	8	ISM	ENSMUSG00000030890.17	ENSMUST00000033182.10	1795	13	0	1442	0	-1404	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGACACTGAATTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	105385798	105390690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105385924_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580
ENSMUSG00000030890.17_105385878_105390827_1	chr7	+	863	9	ISM	ENSMUSG00000030890.17	ENSMUST00000033182.10	1795	13	79	1305	4	-1267	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCCCCCAGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	105385877	105390827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105385924_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786
ENSMUSG00000030890.17_105386308_105391742_1	chr7	+	1097	10	FSM	ENSMUSG00000030890.17	ENST00000528995.5	1483	10	3	383	3	-352	multi-exon	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATCCCACCAGGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	105386307	105391742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_105386445_105389383_105389550_105389719_105389816_105390166_105390251_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUSG00000030890.17_105386330_105391030_1	chr7	+	919	9	ISM	ENSMUSG00000030890.17	ENSMUST00000163389.9	1749	13	398	1099	25	-1064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGACATGGCAAGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	105386329	105391030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993
ENSMUSG00000030890.17_105389395_105391850_1	chr7	+	1057	9	ISM	ENSMUSG00000030890.17	ENST00000528995.5	1483	10	3090	275	3090	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATGCAGGACAAGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	105389394	105391850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105389550_105389719_105389816_105390166_105390251_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUSG00000030890.17_105389531_105390971_1	chr7	+	769	6	ISM	ENSMUSG00000030890.17	ENST00000537806.5	1803	12	3686	1123	3226	-1123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATTCTTGCTTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	105389530	105390971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105389550_105389719_105389816_105389977_105390251_105390354_105390441_105390580_105390691_105390786
ENSMUSG00000030890.17_105389531_105391303_1	chr7	+	842	9	ISM	ENSMUSG00000030890.17	ENSMUST00000163389.9	1749	13	3599	826	3226	-791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTAAAGGCATCGTATG	NA	NA	NA	NA	NA	NA	NA	NA	105389530	105391303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203
ENSMUSG00000030890.17_105389531_105391992_1	chr7	+	1063	9	ISM	ENSMUSG00000030890.17	ENST00000528995.5	1483	10	3226	133	3226	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTGTTCCCTGCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	105389530	105391992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105389550_105389719_105389816_105390166_105390251_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUSG00000030890.17_105389718_105391117_1	chr7	+	819	6	ISM	ENSMUSG00000030890.17	ENST00000537806.5	1803	12	3873	977	3413	-977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCACAGTTCACTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	105389717	105391117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105389816_105389977_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993
ENSMUSG00000030890.17_105389718_105391470_1	chr7	+	882	9	ISM	ENSMUSG00000030890.17	ENSMUST00000163389.9	1749	13	3786	659	3413	-624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGCTTCTGTGGGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	105389717	105391470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413
ENSMUSG00000030890.17_105389718_105392132_1	chr7	+	1186	8	ISM	ENSMUSG00000030890.17	ENST00000528995.5	1483	10	3413	-7	3413	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGTGTGGGGACAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	105389717	105392132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105389816_105390166_105390251_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUSG00000030890.17_105389976_105391303_1	chr7	+	821	6	ISM	ENSMUSG00000030890.17	ENST00000537806.5	1803	12	4131	791	3671	-791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTAAAGGCATCGTATG	NA	NA	NA	NA	NA	NA	NA	NA	105389975	105391303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203
ENSMUSG00000030890.17_105389976_105391742_1	chr7	+	883	9	ISM	ENSMUSG00000030890.17	ENSMUST00000163389.9	1749	13	4044	387	3671	-352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATCCCACCAGGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	105389975	105391742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUSG00000030890.17_105390179_105391850_1	chr7	+	880	8	ISM	ENSMUSG00000030890.17	ENSMUST00000163389.9	1749	13	4247	279	3874	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATGCAGGACAAGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	105390178	105391850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUSG00000030890.17_105390179_105392132_1	chr7	+	1076	7	ISM	ENSMUSG00000030890.17	ENST00000528995.5	1483	10	3874	-7	3874	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGTGTGGGGACAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	105390178	105392132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105390251_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUSG00000030890.17_105390389_105391992_1	chr7	+	916	7	ISM	ENSMUSG00000030890.17	ENSMUST00000163389.9	1749	13	4457	137	4084	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTGTTCCCTGCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	105390388	105391992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUSG00000030894.6_105394490_105396230_1	chr7	-	1571	2	ISM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	5212	472	4706	-472	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTCAGACCATGTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	105396230	105394489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105395980_105396149
ENSMUSG00000030894.6_105395126_105398508_1	chr7	-	1596	7	ISM	ENSMUSG00000030894.6	ENST00000644810.1	1563	9	2428	-471	2428	471	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGAGTGATTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	105398508	105395125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431
ENSMUSG00000030894.6_105395126_105398559_1	chr7	-	1647	7	ISM	ENSMUSG00000030894.6	ENST00000644810.1	1563	9	2377	-471	2377	471	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGAGTGATTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	105398559	105395125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431
ENSMUSG00000030894.6_105395262_105398624_1	chr7	-	1576	7	ISM	ENSMUSG00000030894.6	ENST00000644810.1	1563	9	2312	-335	2312	335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGCTGCAATCTATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	105398624	105395261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431
ENSMUSG00000030894.6_105395428_105398886_1	chr7	-	1559	8	ISM	ENSMUSG00000030894.6	ENST00000644810.1	1563	9	2050	-169	2050	169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACCTTTGACTAATCGT	NA	NA	NA	NA	NA	NA	NA	NA	105398886	105395427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743
ENSMUSG00000030894.6_105395597_105399194_1	chr7	-	1551	9	ISM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	2248	1579	1742	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACCCCAACCCCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	105399194	105395596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066
ENSMUSG00000030894.6_105395597_105400936_1	chr7	-	1563	9	FSM	ENSMUSG00000030894.6	ENST00000644810.1	1563	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACCCCAACCCCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	105400936	105395596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105400796
ENSMUSG00000030894.6_105395750_105399537_1	chr7	-	1549	10	ISM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	1905	1732	1399	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTCCTGTTGCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	105399537	105395749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386
ENSMUSG00000030894.6_105395902_105401299_1	chr7	-	1648	12	ISM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	143	1884	-14	-305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGACAGGTTGGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	105401299	105395901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188
ENSMUSG00000030894.6_105396153_105401405_1	chr7	-	1556	12	ISM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	37	2135	37	-556	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGAGTATTGGAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	105401405	105396152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ENSMUSG00000030894.6_105397789_105399195_1	chr7	-	710	5	ISM	ENSMUSG00000030894.6	ENST00000642892.1	1886	12	2090	2192	1741	-2192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACCCCACTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	105399195	105397788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399119
ENSMUSG00000030894.6_105398140_105399439_1	chr7	-	642	5	ISM	ENSMUSG00000030894.6	ENST00000642892.1	1886	12	1846	2543	1497	-2543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTCATGAAGGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	105399439	105398139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105398279_105398431_105398631_105398743_105398920_105399119_105399195_105399386
ENSMUSG00000030894.6_105398194_105399491_1	chr7	-	640	5	ISM	ENSMUSG00000030894.6	ENST00000642892.1	1886	12	1794	2597	1445	-2597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGGAGACGATGAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	105399491	105398193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105398279_105398431_105398631_105398743_105398920_105399119_105399195_105399386
ENSMUSG00000030894.6_105398250_105399538_1	chr7	-	631	5	ISM	ENSMUSG00000030894.6	ENST00000642892.1	1886	12	1747	2653	1398	-2653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGCTCCTGCTTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	105399538	105398249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105398279_105398431_105398631_105398743_105398920_105399119_105399195_105399386
ENSMUSG00000030894.6_105398463_105400936_1	chr7	-	710	5	ISM	ENSMUSG00000030894.6	ENST00000642892.1	1886	12	349	2866	0	-2866	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTCCACTTGGGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	105400936	105398462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105398631_105398743_105398920_105399119_105399195_105399386_105399538_105400796
ENSMUSG00000030894.6_105398581_105401299_1	chr7	-	703	6	ISM	ENSMUSG00000030894.6	ENST00000642892.1	1886	12	-14	2984	-14	-2984	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGGTGGCAGTTTTACAC	NA	NA	NA	NA	NA	NA	NA	NA	105401299	105398580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105398631_105398743_105398920_105399119_105399195_105399386_105399538_105400796_105400937_105401188
ENSMUSG00000030897.6_105054119_105056369_1	chr7	+	621	4	FSM	ENSMUSG00000030897.6	ENST00000533426.5	642	4	23	-2	23	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACTGGTAGGGACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	105054118	105056369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_105054198_105054376_105054484_105055261_105055335_105056007
ENSMUSG00000030897.6_105054119_105056369_2	chr7	+	614	4	NNC	ENSMUSG00000030897.6	novel	642	4	NA	NA	23	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACTGGTAGGGACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	105054118	105056369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_105054198_105054376_105054484_105055261_105055335_105056014
ENSMUSG00000030897.6_105054119_105056369_3	chr7	+	619	4	NNC	ENSMUSG00000030897.6	novel	642	4	NA	NA	23	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACTGGTAGGGACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	105054118	105056369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_105054198_105054378_105054484_105055261_105055335_105056007
ENSMUSG00000030898.16_105075203_105084753_1	chr7	+	1245	4	FSM	ENSMUSG00000030898.16	ENST00000532715.5	1712	4	62	405	-26	-405	multi-exon	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGCAGTATCTTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	105075202	105084753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_105075383_105083201_105083452_105083726_105083885_105084096
ENSMUSG00000030898.16_105075257_105084803_1	chr7	+	1241	4	FSM	ENSMUSG00000030898.16	ENST00000532715.5	1712	4	116	355	28	-355	multi-exon	FALSE	canonical	NA	NA	NA	NA	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAAGAGGCTCACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	105075256	105084803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_105075383_105083201_105083452_105083726_105083885_105084096
ENSMUSG00000030898.16_105075302_105084860_1	chr7	+	1253	4	FSM	ENSMUSG00000030898.16	ENST00000532715.5	1712	4	161	298	73	-298	multi-exon	FALSE	canonical	NA	NA	NA	NA	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCCATTACATAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	105075301	105084860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_105075383_105083201_105083452_105083726_105083885_105084096
ENSMUSG00000030898.16_105082819_105083304_1	chr7	+	326	2	ISM	ENSMUSG00000030898.16	ENST00000334619.7	1876	5	7590	1854	7590	-1854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGCAGCTCGGGTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	105082818	105083304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105083042_105083201
ENSMUSG00000030898.16_105083253_105084998_1	chr7	+	1259	3	ISM	ENSMUSG00000030898.16	ENST00000334619.7	1876	5	8024	160	8024	-160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGACTTAGGACATTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	105083252	105084998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105083452_105083726_105083885_105084096
ENSMUSG00000030898.16_105083307_105085079_1	chr7	+	1286	3	ISM	ENSMUSG00000030898.16	ENST00000334619.7	1876	5	8078	79	8078	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATCACATGCCTTTCGG	NA	NA	NA	NA	NA	NA	NA	NA	105083306	105085079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105083452_105083726_105083885_105084096
ENSMUSG00000030917.14_119701576_119720209_1	chr7	+	1478	5	NNC	ENSMUSG00000030917.14	novel	1484	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTTTTCTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	119701575	119720209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_119701739_119703858_119704053_119714608_119714778_119715442_119715582_119719396
ENSMUSG00000030922.13_119495084_119509185_1	chr7	+	189	2	ISM	ENSMUSG00000030922.13	ENSMUST00000106518.9	875	4	0	6771	0	-6384	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGGCCCCATCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	119495083	119509185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119495114_119509026
ENSMUSG00000030922.13_119509120_119515422_1	chr7	+	218	3	ISM	ENSMUSG00000030922.13	ENSMUST00000106516.2	1069	4	9789	557	9789	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGAGAAAACTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	119509119	119515422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119509186_119513395_119513489_119515363
ENSMUSG00000030924.17_119398840_119417663_1	chr7	+	487	5	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	54	30361	54	-30361	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCCCTCTTTGGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	119398839	119417663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119398901_119400452_119400580_119401963_119402061_119404365_119404510_119417605
ENSMUSG00000030924.17_119400512_119418729_1	chr7	+	473	5	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	1726	29295	1726	-29295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCAAGCCTGATCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	119400511	119418729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119400580_119401963_119402061_119404365_119404510_119417605_119417695_119418654
ENSMUSG00000030924.17_119402012_119423033_1	chr7	+	453	5	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	3226	24991	3226	-24991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAGAAGCTGTTAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	119402011	119423033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119402061_119404365_119404510_119417605_119417695_119418654_119418771_119422978
ENSMUSG00000030924.17_119404447_119423310_1	chr7	+	450	5	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	5661	24714	5661	-24714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACAAGGCAGAAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	119404446	119423310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119423267
ENSMUSG00000030924.17_119417604_119424861_1	chr7	+	544	5	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	18818	23163	18818	-23163	internal_fragment	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTATCTTTGACCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	119417603	119424861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119417695_119418654_119418771_119422978_119423118_119423267_119423363_119424758
ENSMUSG00000030924.17_119418654_119427257_1	chr7	+	498	5	NIC	ENSMUSG00000030924.17	novel	2121	16	NA	NA	19868	-20767	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGTCATAATCTAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	119418653	119427257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_119418771_119422978_119423118_119423267_119423363_119424758_119424862_119427213
ENSMUSG00000030924.17_119423099_119427432_1	chr7	+	436	4	NIC	ENSMUSG00000030924.17	novel	2121	16	NA	NA	24313	-20592	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACCTATTTTACCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	119423098	119427432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_119423118_119423267_119423363_119424758_119424862_119427213
ENSMUSG00000030924.17_119423323_119432003_1	chr7	+	473	4	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	24537	16021	24537	-16021	internal_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGGTTCTGCTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	119423322	119432003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119423363_119424758_119424866_119427213_119427430_119431893
ENSMUSG00000030924.17_119424774_119433553_1	chr7	+	480	4	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	25988	14471	25988	-14471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTCTGAAGAAGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	119424773	119433553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119424866_119427213_119427430_119431893_119431999_119433486
ENSMUSG00000030924.17_119427368_119443135_1	chr7	+	463	5	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	28582	4889	28582	-4889	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGGAGAACCAAGGTACTA	NA	NA	NA	NA	NA	NA	NA	NA	119427367	119443135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119427430_119431893_119431999_119433486_119433625_119442464_119442558_119443070
ENSMUSG00000030924.17_119431892_119443262_1	chr7	+	530	4	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	33106	4762	33106	-4762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAAAAAACTACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	119431891	119443262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119431999_119433486_119433625_119442464_119442558_119443070
ENSMUSG00000030924.17_119431958_119443287_1	chr7	+	489	4	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	33172	4737	33172	-4737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCTTACTATTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	119431957	119443287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119431999_119433486_119433625_119442464_119442558_119443070
ENSMUSG00000030924.17_119433580_119443547_1	chr7	+	421	4	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	34794	4477	34794	-4477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCAGAAATGCCCTAACC	NA	NA	NA	NA	NA	NA	NA	NA	119433579	119443547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119433625_119442464_119442558_119443070_119443288_119443481
ENSMUSG00000030924.17_119433580_119443600_1	chr7	+	474	4	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	34794	4424	34794	-4424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTGAACCAGCAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	119433579	119443600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119433625_119442464_119442558_119443070_119443288_119443481
ENSMUSG00000030924.17_119443088_119444724_1	chr7	+	507	3	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	44302	3300	44302	-3300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGATTTGATGTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	119443087	119444724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119443288_119443481_119443670_119444605
ENSMUSG00000030924.17_119443210_119448017_1	chr7	+	448	4	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	44424	7	44424	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGCGTGAGAGTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	119443209	119448017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119443288_119443481_119443670_119444605_119444725_119447954
ENSMUSG00000030929.18_119384752_119389578_1	chr7	-	1410	5	ISM	ENSMUSG00000030929.18	ENSMUST00000150844.3	3564	9	3703	1698	3612	-1698	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGAAGACTGGAAAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	119389578	119384751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456
ENSMUSG00000030930.15_131838563_131843220_1	chr7	-	1706	2	ISM	ENSMUSG00000030930.15	ENSMUST00000077472.10	5041	8	75223	1054	75223	-1054	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAGATGGGACTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	131843220	131838562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_131840194_131843145
ENSMUSG00000030930.15_131838781_131849703_1	chr7	-	1672	3	ISM	ENSMUSG00000030930.15	ENSMUST00000077472.10	5041	8	68740	1272	68740	-1272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACAAGGTGGGGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	131849703	131838780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_131840194_131843145_131843294_131849592
ENSMUSG00000030934.10_132159445_132161417_1	chr7	-	658	2	ISM	ENSMUSG00000030934.10	ENST00000445444.1	615	5	10416	-535	10416	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCATTACTAAATTACAC	NA	NA	NA	NA	NA	NA	NA	NA	132161417	132159444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_132160060_132161374
ENSMUSG00000030934.10_132159582_132162525_1	chr7	-	668	3	ISM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	15602	375	9308	-375	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGAGATACTACAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	132162525	132159581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_132160060_132161374_132161520_132162480
ENSMUSG00000030934.10_132159689_132163575_1	chr7	-	693	4	ISM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	14552	482	8258	291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAACGGACCCATCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	132163575	132159688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512
ENSMUSG00000030934.10_132159754_132163622_1	chr7	-	675	4	ISM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	14505	547	8211	226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTGAGAGCGAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	132163622	132159753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512
ENSMUSG00000030934.10_132159833_132163641_1	chr7	-	615	4	ISM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	14486	626	8192	147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTCTCCTGAAAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	132163641	132159832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512
ENSMUSG00000030934.10_132159980_132163641_1	chr7	-	408	4	NNC	ENSMUSG00000030934.10	novel	615	5	NA	NA	8192	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCCCTCCCCTTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	132163641	132159979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_132160060_132161374_132161460_132162480_132162595_132163512
ENSMUSG00000030934.10_132159980_132166063_1	chr7	-	719	6	ISM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	12064	773	5770	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCCCTCCCCTTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	132166063	132159979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935
ENSMUSG00000030934.10_132159980_132171689_1	chr7	-	471	5	FSM	ENSMUSG00000030934.10	ENST00000445444.1	615	5	144	0	144	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCCCTCCCCTTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	132171689	132159979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_132160060_132161374_132161464_132162480_132162595_132163512_132163642_132171630
ENSMUSG00000030934.10_132161375_132168593_1	chr7	-	735	6	ISM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	9534	2168	3240	-1395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGCCACAGCACACTG	NA	NA	NA	NA	NA	NA	NA	NA	132168593	132161374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497
ENSMUSG00000030934.10_132161375_132171689_1	chr7	-	387	4	NNC	ENSMUSG00000030934.10	novel	615	5	NA	NA	144	-1395	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGCCACAGCACACTG	NA	NA	NA	NA	NA	NA	NA	NA	132171689	132161374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_132161460_132162480_132162595_132163512_132163642_132171630
ENSMUSG00000030934.10_132161504_132168836_1	chr7	-	648	7	ISM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	9291	2297	2997	-1524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGCTGAGAATGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	132168836	132161503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794
ENSMUSG00000030934.10_132162576_132168967_1	chr7	-	668	6	ISM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	9160	3369	2866	-2596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGATGAGATAATGCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	132168967	132162575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794
ENSMUSG00000030934.10_132164314_132171689_1	chr7	-	629	5	ISM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	6438	5107	144	-4334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCCACTCACTTTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	132171689	132164313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634
ENSMUSG00000030934.10_132166008_132178127_1	chr7	-	716	5	ISM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	0	6801	0	-6028	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATGATGGCTTTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	132178127	132166007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132178023
ENSMUSG00000030942.9_119315794_119317346_1	chr7	-	601	2	ISM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	2675	1478	2675	-1478	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCAGTTTTGTTAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	119317346	119315793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_119316293_119317244
ENSMUSG00000030942.9_119315834_119317413_1	chr7	-	628	2	ISM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	2608	1518	2608	-1518	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTTGTGTGCTGCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	119317413	119315833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_119316293_119317244
ENSMUSG00000030942.9_119315896_119317463_1	chr7	-	616	2	ISM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	2558	1580	2558	-1580	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCATTCTGTGGGAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	119317463	119315895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_119316293_119317244
ENSMUSG00000030946.14_132232224_132235805_1	chr7	+	251	2	ISM	ENSMUSG00000030946.14	ENSMUST00000106170.8	999	7	19828	36533	15	-36533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCTATCAGAACATGAACA	NA	NA	NA	NA	NA	NA	NA	NA	132232223	132235805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_132232399_132235729
ENSMUSG00000030946.14_132232285_132235845_1	chr7	+	230	2	ISM	ENSMUSG00000030946.14	ENSMUST00000106170.8	999	7	19889	36493	76	-36493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGAAAACCCCGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	132232284	132235845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_132232399_132235729
ENSMUSG00000030946.14_132232369_132243302_1	chr7	+	234	3	ISM	ENSMUSG00000030946.14	ENSMUST00000106170.8	999	7	19973	29036	160	-29036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGCGCTCGAGGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	132232368	132243302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_132232399_132235729_132235884_132243252
ENSMUSG00000030946.14_132235832_132307347_1	chr7	+	236	4	ISM	ENSMUSG00000030946.14	ENST00000368839.1	598	5	3623	70	3623	-70	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCAGATGGGTACGTGG	NA	NA	NA	NA	NA	NA	NA	NA	132235831	132307347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_132235884_132243252_132243317_132244215_132244309_132307320
ENSMUSG00000030960.17_132429186_132452438_1	chr7	-	866	4	ISM	ENSMUSG00000030960.17	ENSMUST00000033257.15	1107	6	1964	0	1907	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTGGTTTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	132452438	132429185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_132429612_132433088_132433306_132438828_132438937_132452323
ENSMUSG00000030960.17_132429186_132453169_1	chr7	-	881	5	ISM	ENSMUSG00000030960.17	ENSMUST00000033257.15	1107	6	1233	0	1176	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTGGTTTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	132453169	132429185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_132429612_132433088_132433306_132438828_132438937_132452323_132452439_132453154
ENSMUSG00000030960.17_132429338_132454314_1	chr7	-	867	6	FSM	ENSMUSG00000030960.17	ENSMUST00000033257.15	1107	6	88	152	31	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGGGAATCAGTACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	132454314	132429337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_132429612_132433088_132433306_132438828_132438937_132452323_132452439_132453154_132453221_132454227
ENSMUSG00000030960.17_132429510_132454314_1	chr7	-	695	6	FSM	ENSMUSG00000030960.17	ENSMUST00000033257.15	1107	6	88	324	31	-172	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAAAATCAGTTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	132454314	132429509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_132429612_132433088_132433306_132438828_132438937_132452323_132452439_132453154_132453221_132454227
ENSMUSG00000030965.20_132461036_132485587_1	chr7	+	1557	9	FSM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	82	1253	82	-1253	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCACTATCATGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	132461035	132485587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478326_132478447_132480257_132480343_132482495_132482611_132484763
ENSMUSG00000030965.20_132476628_132485913_1	chr7	+	1589	5	ISM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	15674	927	15674	-927	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATGCTGCGCTGCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	132476627	132485913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_132476747_132478326_132478447_132480257_132480343_132482495_132482611_132484763
ENSMUSG00000030965.20_132476691_132485952_1	chr7	+	1565	5	ISM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	15737	888	15737	-888	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGCAGATGGCAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	132476690	132485952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_132476747_132478326_132478447_132480257_132480343_132482495_132482611_132484763
ENSMUSG00000030965.20_132478387_132486096_1	chr7	+	1593	4	ISM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	17433	744	17433	-744	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTTTTGAGAAAATATCCA	NA	NA	NA	NA	NA	NA	NA	NA	132478386	132486096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_132478447_132480257_132480343_132482495_132482611_132484763
ENSMUSG00000030972.7_119127830_119139861_1	chr7	+	1170	10	ISM	ENSMUSG00000030972.7	ENSMUST00000207440.2	2494	15	2348	2629	61	-2171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTTTTACATCACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	119127829	119139861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119127862_119129490_119129702_119130995_119131204_119133456_119133601_119133984_119134139_119134961_119135042_119136428_119136553_119137307_119137389_119137510_119137613_119139827
ENSMUSG00000030972.7_119129558_119140056_1	chr7	+	1188	10	ISM	ENSMUSG00000030972.7	ENSMUST00000207440.2	2494	15	4076	2434	1789	-1976	internal_fragment	TRUE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGAGTGCACTTGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	119129557	119140056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119129702_119130995_119131204_119133456_119133601_119133984_119134139_119134961_119135042_119136428_119136553_119137307_119137389_119137510_119137613_119139827_119139956_119140033
ENSMUSG00000030972.7_119129688_119141572_1	chr7	+	1168	11	ISM	ENSMUSG00000030972.7	ENSMUST00000207440.2	2494	15	4206	918	1919	-460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATCTCATGACCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	119129687	119141572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119129702_119130995_119131204_119133456_119133601_119133984_119134139_119134961_119135042_119136428_119136553_119137307_119137389_119137510_119137613_119139827_119139956_119140033_119140134_119141539
ENSMUSG00000030972.7_119131114_119142002_1	chr7	+	1188	11	ISM	ENSMUSG00000030972.7	ENST00000331849.8	1644	13	3345	30	3345	-30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGAGTGGGGGAGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	119131113	119142002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_119131204_119133456_119133601_119133984_119134139_119134961_119135042_119136428_119136553_119137307_119137389_119137510_119137613_119139827_119139956_119140033_119140134_119141539_119141660_119141937
ENSMUSG00000030978.11_102090902_102118978_1	chr7	+	3991	19	NNC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGTGGCTATGAACGGC	NA	NA	NA	NA	NA	NA	NA	NA	102090901	102118978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100265_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ENSMUSG00000030978.11_102090902_102118978_2	chr7	+	3990	19	NNC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGTGGCTATGAACGGC	NA	NA	NA	NA	NA	NA	NA	NA	102090901	102118978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109504_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ENSMUSG00000030979.14_133288350_133304135_1	chr7	-	1170	9	ISM	ENSMUSG00000030979.14	ENSMUST00000106146.8	1483	10	6552	265	6552	-256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCGAACTAGAGTTAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	133304135	133288349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058
ENSMUSG00000030979.14_133288472_133310701_1	chr7	-	1160	10	FSM	ENSMUSG00000030979.14	ENSMUST00000106145.10	1644	10	97	387	-14	-378	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCCCACTCTTTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	133310701	133288471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310652
ENSMUSG00000030979.14_133288510_133310786_1	chr7	-	1207	10	FSM	ENSMUSG00000030979.14	ENSMUST00000106145.10	1644	10	12	425	2	-416	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTAGAAAGAAGGAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	133310786	133288509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310652
ENSMUSG00000030980.18_118444079_118452191_1	chr7	-	2000	4	ISM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	3030	2634	376	645	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTTCATGCTGCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	118452191	118444078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625
ENSMUSG00000030980.18_118444143_118452256_1	chr7	-	2001	4	ISM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	2965	2698	311	581	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTTTGATGCTGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	118452256	118444142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625
ENSMUSG00000030980.18_118444617_118454918_1	chr7	-	1907	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	303	3172	-82	107	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCCTTATCAGGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	118454918	118444616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ENSMUSG00000030980.18_118445093_118451799_1	chr7	-	537	4	FSM	ENSMUSG00000030980.18	ENST00000445020.1	1307	4	768	2	768	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGGCCTGGGCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	118451799	118445092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_118445318_118447719_118447798_118449843_118449900_118451621
ENSMUSG00000030980.18_118445211_118451919_1	chr7	-	539	4	FSM	ENSMUSG00000030980.18	ENST00000445020.1	1307	4	648	120	648	-120	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCCTCCCAGCATGACTA	NA	NA	NA	NA	NA	NA	NA	NA	118451919	118445210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_118445318_118447719_118447798_118449843_118449900_118451621
ENSMUSG00000030980.18_118445256_118451980_1	chr7	-	555	4	FSM	ENSMUSG00000030980.18	ENST00000445020.1	1307	4	587	165	587	-165	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGCTTATGGGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	118451980	118445255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_118445318_118447719_118447798_118449843_118449900_118451621
ENSMUSG00000030982.20_118339955_118372288_1	chr7	+	856	10	ISM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	506	69901	506	-68422	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAATTGGTTTTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	118339954	118372288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243
ENSMUSG00000030982.20_118342864_118374582_1	chr7	+	934	11	ISM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	3415	67607	3415	-66128	internal_fragment	TRUE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACGCCCGGGCCTACCTG	NA	NA	NA	NA	NA	NA	NA	NA	118342863	118374582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514
ENSMUSG00000030982.20_118347420_118379522_1	chr7	+	868	11	ISM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	7971	62667	7971	-61188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCGAGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	118347419	118379522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399
ENSMUSG00000030982.20_118352044_118390681_1	chr7	+	925	11	ISM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	12595	51508	-11303	-50029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGAGTCCGGCTTCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	118352043	118390681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590
ENSMUSG00000030982.20_118353055_118391868_1	chr7	+	931	11	ISM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	13606	50321	-10292	-48842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAGTCATCACTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	118353054	118391868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784
ENSMUSG00000030982.20_118359430_118396235_1	chr7	+	916	12	ISM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	19981	45954	-3917	-44475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGGATCGAGCATTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	118359429	118396235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188
ENSMUSG00000030982.20_118374523_118403407_1	chr7	+	928	11	ISM	ENSMUSG00000030982.20	ENSMUST00000033280.14	2934	24	11176	37303	11176	-37303	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCTGCTCTTAAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	118374522	118403407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326
ENSMUSG00000030982.20_118379440_118411052_1	chr7	+	912	12	ISM	ENSMUSG00000030982.20	ENSMUST00000033280.14	2934	24	16093	29658	16093	-29658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGAAAGTCATGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	118379439	118411052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027
ENSMUSG00000030982.20_118390591_118412867_1	chr7	+	950	11	ISM	ENSMUSG00000030982.20	ENSMUST00000033280.14	2934	24	27244	27843	27244	-27843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCTGTCTCTCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	118390590	118412867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752
ENSMUSG00000030982.20_118396206_118433046_1	chr7	+	912	10	ISM	ENSMUSG00000030982.20	ENSMUST00000033280.14	2934	24	32859	7664	32859	-7664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCCATGAGCCAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	118396205	118433046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924
ENSMUSG00000030982.20_118400492_118437444_1	chr7	+	930	9	ISM	ENSMUSG00000030982.20	ENSMUST00000033280.14	2934	24	37145	3266	37145	-3266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGACGAGGTGGGTACCC	NA	NA	NA	NA	NA	NA	NA	NA	118400491	118437444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335
ENSMUSG00000030982.20_118403361_118439854_1	chr7	+	905	9	ISM	ENSMUSG00000030982.20	ENSMUST00000033280.14	2934	24	40014	856	40014	-856	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACCAACTCTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	118403360	118439854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777
ENSMUSG00000030982.20_118409133_118440522_1	chr7	+	936	8	ISM	ENSMUSG00000030982.20	ENSMUST00000033280.14	2934	24	45786	188	45786	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTCGGGAGTCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	118409132	118440522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ENSMUSG00000030982.20_118412793_118440702_1	chr7	+	931	6	ISM	ENSMUSG00000030982.20	ENSMUST00000033280.14	2934	24	49446	8	49446	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTAGATAGCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	118412792	118440702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ENSMUSG00000030982.20_118433031_118441005_1	chr7	+	913	4	ISM	ENSMUSG00000030982.20	ENSMUST00000033280.14	2934	24	69684	-295	69684	295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCAGTAACCTATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	118433030	118441005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_118433091_118437335_118437455_118439777_118439925_118440418
ENSMUSG00000030982.20_118437424_118441145_1	chr7	+	905	3	ISM	ENSMUSG00000030982.20	ENSMUST00000033280.14	2934	24	74077	-435	74077	435	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAGCAAGCACATCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	118437423	118441145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_118437455_118439777_118439925_118440418
ENSMUSG00000030982.20_118439884_118441281_1	chr7	+	904	2	ISM	ENSMUSG00000030982.20	ENSMUST00000033280.14	2934	24	76537	-571	76537	571	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTACTGCCTGTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	118439883	118441281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_118439925_118440418
ENSMUSG00000030983.5_133315941_133322492_1	chr7	+	642	6	ISM	ENSMUSG00000030983.5	ENSMUST00000033282.5	1244	7	4879	382	4879	-382	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGATGGTCCTTCGATGA	NA	NA	NA	NA	NA	NA	NA	NA	133315940	133322492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_133315992_133316627_133316709_133318589_133318680_133319327_133319516_133320832_133321008_133322435
ENSMUSG00000030983.5_133318588_133322670_1	chr7	+	690	4	ISM	ENSMUSG00000030983.5	ENSMUST00000033282.5	1244	7	7526	204	7526	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGAAAAACTCATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	133318587	133322670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_133318680_133319327_133319516_133320832_133321008_133322435
ENSMUSG00000030983.5_133319420_133322874_1	chr7	+	710	3	ISM	ENSMUSG00000030983.5	ENSMUST00000033282.5	1244	7	8358	0	8358	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAAGTGTTCATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	133319419	133322874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_133319516_133320832_133321008_133322435
ENSMUSG00000030983.5_133320833_133322874_1	chr7	+	614	2	ISM	ENSMUSG00000030983.5	ENSMUST00000033282.5	1244	7	9771	0	9771	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAAGTGTTCATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	133320832	133322874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_133321008_133322435
ENSMUSG00000030986.14_133322675_133344530_1	chr7	-	2041	9	ISM	ENSMUSG00000030986.14	ENSMUST00000106139.8	2233	11	33900	-102	33900	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCTCTTCAATGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	133344530	133322674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157
ENSMUSG00000030986.14_133322777_133350629_1	chr7	-	1997	10	ISM	ENSMUSG00000030986.14	ENSMUST00000106139.8	2233	11	27801	0	27801	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGAAAAAAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	133350629	133322776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571
ENSMUSG00000030986.14_133322839_133350729_1	chr7	-	2035	10	ISM	ENSMUSG00000030986.14	ENSMUST00000106139.8	2233	11	27701	62	27701	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTACTATTCCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	133350729	133322838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571
ENSMUSG00000030986.14_133322996_133361205_1	chr7	-	1991	11	ISM	ENSMUSG00000030986.14	ENSMUST00000033290.12	2955	12	17327	325	17225	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCAGATGCTACTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	133361205	133322995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128
ENSMUSG00000030986.14_133323047_133361269_1	chr7	-	2004	11	ISM	ENSMUSG00000030986.14	ENSMUST00000033290.12	2955	12	17263	376	17161	-208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCACCTACCCACAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	133361269	133323046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128
ENSMUSG00000030986.14_133323106_133361326_1	chr7	-	2002	11	ISM	ENSMUSG00000030986.14	ENSMUST00000033290.12	2955	12	17206	435	17104	-267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTATTTCAGTAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	133361326	133323105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128
ENSMUSG00000030986.14_133323996_133361440_1	chr7	-	1978	10	ISM	ENSMUSG00000030986.14	ENSMUST00000033290.12	2955	12	17092	1325	16990	-1157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATCCCTTATCAAGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	133361440	133323995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128
ENSMUSG00000030986.14_133324773_133361558_1	chr7	-	2030	9	ISM	ENSMUSG00000030986.14	ENSMUST00000033290.12	2955	12	16974	2102	16872	-1934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAAGCAGGGCAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	133361558	133324772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128
ENSMUSG00000030986.14_133324927_133378362_1	chr7	-	1992	10	ISM	ENSMUSG00000030986.14	ENSMUST00000033290.12	2955	12	170	2256	68	-2088	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCTGCTCTGCTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	133378362	133324926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378330
ENSMUSG00000030990.19_101872235_101886861_1	chr7	+	1121	7	FSM	ENSMUSG00000030990.19	ENSMUST00000156529.8	2034	7	0	913	0	-109	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCACCACTCATGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	101872234	101886861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
ENSMUSG00000030990.19_101875582_101887180_1	chr7	+	1101	5	ISM	ENSMUSG00000030990.19	ENSMUST00000156529.8	2034	7	3347	594	106	196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGGGGAAAGTACGCT	NA	NA	NA	NA	NA	NA	NA	NA	101875581	101887180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
ENSMUSG00000030990.19_101885329_101887318_1	chr7	+	1140	4	ISM	ENSMUSG00000111339.2	ENSMUST00000214560.2	606	5	268	-581	30	577	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTAAAACTTCTAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	101885328	101887318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101885554_101885654_101885750_101886328_101886438_101886607
ENSMUSG00000030990.19_101885413_101886635_1	chr7	+	461	4	FSM	ENSMUSG00000111339.2	ENST00000490830.5	681	4	114	106	114	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTTGTCCTAACCAACA	NA	NA	NA	NA	NA	NA	NA	NA	101885412	101886635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_101885554_101885654_101885838_101886328_101886438_101886607
ENSMUSG00000030990.19_101885441_101887442_1	chr7	+	1152	4	ISM	ENSMUSG00000111339.2	ENSMUST00000214560.2	606	5	380	-705	142	701	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGCCTTTAATCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	101885440	101887442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101885554_101885654_101885750_101886328_101886438_101886607
ENSMUSG00000030990.19_101885655_101886741_1	chr7	+	426	3	ISM	ENSMUSG00000111339.2	ENST00000490830.5	681	4	356	0	356	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTGTGATGCTGGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	101885654	101886741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101885838_101886328_101886438_101886607
ENSMUSG00000030990.19_101885655_101886741_2	chr7	+	416	3	ISM	ENSMUSG00000030990.19	ENST00000493547.6	1089	5	10179	243	6449	107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTGTGATGCTGGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	101885654	101886741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101885828_101886328_101886438_101886607
ENSMUSG00000030994.17_133868348_133951513_1	chr7	-	1998	6	FSM	ENSMUSG00000030994.17	ENST00000356858.7	2043	6	46	-1	46	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGATCCCAGGTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	133951513	133868347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_133868567_133871922_133871987_133894956_133895135_133896693_133896873_133899844_133900130_133950440
ENSMUSG00000031007.3_12454040_12482292_1	chrX	+	1094	7	FSM	ENSMUSG00000031007.3	ENST00000423649.2	1007	7	-85	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAATTGTGATATAGATT	NA	NA	NA	NA	NA	NA	NA	NA	12454039	12482292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUSG00000031007.3_12454040_12482577_1	chrX	+	1613	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	0	711	0	206	multi-exon	FALSE	canonical	NA	NA	NA	NA	3947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGCCCAAAAATACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	12454039	12482577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUSG00000031007.3_12454040_12482630_1	chrX	+	1666	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	0	658	0	259	multi-exon	FALSE	canonical	NA	NA	NA	NA	4328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGACTAGCAAGCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	12454039	12482630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUSG00000031007.3_12454040_12482968_1	chrX	+	1873	8	FSM	ENSMUSG00000031007.3	ENST00000636251.1	1786	8	-85	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	6105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATGATTCAAAATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	12454039	12482968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_12454175_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUSG00000031007.3_12454148_12482672_1	chrX	+	1600	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	108	616	23	-294	multi-exon	FALSE	canonical	NA	NA	NA	NA	4455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGATCCGTGTGGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	12454147	12482672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUSG00000031007.3_12461077_12482814_1	chrX	+	1638	8	ISM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	7037	474	6952	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAAATATTTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	12461076	12482814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUSG00000031007.3_12462454_12482968_1	chrX	+	1679	7	ISM	ENSMUSG00000031007.3	ENST00000636251.1	1786	8	8329	-2	8329	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATGATTCAAAATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	12462453	12482968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUSG00000031007.3_12462482_12473205_1	chrX	+	273	4	ISM	ENSMUSG00000031007.3	ENST00000636970.1	1087	7	8357	9158	8357	-9085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGACTTGTATTCATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	12462481	12473205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_12462527_12471356_12471495_12472519_12472574_12473169
ENSMUSG00000031007.3_12471106_12475193_1	chrX	+	538	5	ISM	ENSMUSG00000031007.3	ENST00000447485.6	1221	9	16981	7097	16981	-7097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAACTTTTTGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	12471105	12475193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475093
ENSMUSG00000031007.3_12471183_12481970_1	chrX	+	511	6	ISM	ENSMUSG00000031007.3	ENST00000447485.6	1221	9	17058	320	17058	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTTTTCAACTTGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	12471182	12481970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475093_12475194_12481920
ENSMUSG00000031007.3_12471355_12482056_1	chrX	+	580	5	ISM	ENSMUSG00000031007.3	ENST00000447485.6	1221	9	17230	234	17230	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATATGATAGCATCATC	NA	NA	NA	NA	NA	NA	NA	NA	12471354	12482056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_12471495_12472519_12472574_12473169_12473320_12475093_12475194_12481920
ENSMUSG00000031007.3_12471387_12483109_1	chrX	+	1621	5	ISM	ENSMUSG00000031007.3	ENST00000636251.1	1786	8	17262	-143	17262	143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCCTCCTAAGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	12471386	12483109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUSG00000031007.3_12472518_12483290_1	chrX	+	1696	4	ISM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	18478	-2	18393	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGTTACAGTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	12472517	12483290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUSG00000031007.3_12473215_12482201_1	chrX	+	486	3	ISM	ENSMUSG00000031007.3	ENST00000447485.6	1221	9	19090	89	19090	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCTTAAGTTTATTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	12473214	12482201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_12473320_12475093_12475194_12481920
ENSMUSG00000031012.18_13387293_13415418_1	chrX	-	1979	8	ISM	ENSMUSG00000031012.18	ENST00000645986.2	4519	27	297416	5	-22411	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACTAACAGGACAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	13415418	13387292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13388587_13392236_13392321_13398104_13398225_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403
ENSMUSG00000031012.18_13387331_13415488_1	chrX	-	2011	8	ISM	ENSMUSG00000031012.18	ENST00000645986.2	4519	27	297346	43	-22481	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATAATCTATAACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	13415488	13387330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13388587_13392236_13392321_13398104_13398225_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403
ENSMUSG00000031012.18_13387403_13415561_1	chrX	-	2012	8	ISM	ENSMUSG00000031012.18	ENST00000645986.2	4519	27	297273	115	-22554	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATTTAAAGAGAATATACT	NA	NA	NA	NA	NA	NA	NA	NA	13415561	13387402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13388587_13392236_13392321_13398104_13398225_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403
ENSMUSG00000031012.18_13387570_13475058_1	chrX	-	2731	17	ISM	ENSMUSG00000031012.18	ENST00000378154.3	4002	25	237694	-5	-82051	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTAGTGAAATGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	13475058	13387569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466587_13466696_13474972
ENSMUSG00000031012.18_13387674_13480800_1	chrX	-	2717	18	ISM	ENSMUSG00000031012.18	ENST00000378154.3	4002	25	231952	99	-87793	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAATTGCTATTATGAC	NA	NA	NA	NA	NA	NA	NA	NA	13480800	13387673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466587_13466696_13474972_13475057_13480708
ENSMUSG00000031012.18_13387814_13427808_1	chrX	-	2034	14	ISM	ENSMUSG00000031012.18	ENST00000645986.2	4519	27	285026	526	-34801	77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGAAGTTGGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	13427808	13387813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13388587_13392236_13392321_13398104_13398225_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753
ENSMUSG00000031012.18_13387886_13427857_1	chrX	-	2011	14	ISM	ENSMUSG00000031012.18	ENST00000645986.2	4519	27	284977	598	-34850	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAAGTCCTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	13427857	13387885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13388587_13392236_13392321_13398104_13398225_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753
ENSMUSG00000031012.18_13387891_13492538_1	chrX	-	2812	20	ISM	ENSMUSG00000031012.18	ENST00000378154.3	4002	25	220214	316	-99531	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTTTTTTTAAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	13492538	13387890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466587_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433
ENSMUSG00000031012.18_13387891_13549287_1	chrX	-	2928	22	ISM	ENSMUSG00000031012.18	ENST00000646120.2	3225	25	163037	0	-156280	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTTTTTTTAAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	13549287	13387890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13417185_13417222_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466587_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209
ENSMUSG00000031012.18_13388021_13434797_1	chrX	-	2044	15	ISM	ENSMUSG00000031012.18	ENST00000645986.2	4519	27	278037	733	-41790	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGGTGGAACACTACAT	NA	NA	NA	NA	NA	NA	NA	NA	13434797	13388020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13388587_13392236_13392321_13398104_13398225_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714
ENSMUSG00000031012.18_13388021_13543899_1	chrX	-	2756	21	ISM	ENSMUSG00000031012.18	ENST00000378154.3	4002	25	168853	446	-150892	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGGTGGAACACTACAT	NA	NA	NA	NA	NA	NA	NA	NA	13543899	13388020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466587_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823
ENSMUSG00000031012.18_13388021_13581012_1	chrX	-	2906	23	ISM	ENSMUSG00000031012.18	ENST00000646120.2	3225	25	131312	130	131312	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGGTGGAACACTACAT	NA	NA	NA	NA	NA	NA	NA	NA	13581012	13388020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13417185_13417222_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466587_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904
ENSMUSG00000031012.18_13388184_13453207_1	chrX	-	2082	17	ISM	ENSMUSG00000031012.18	ENST00000645986.2	4519	27	259627	896	-60200	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATGTATCTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	13453207	13388183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13388587_13392236_13392321_13398104_13398225_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082
ENSMUSG00000031012.18_13388184_13581012_1	chrX	-	2776	23	ISM	ENSMUSG00000031012.18	ENST00000378154.3	4002	25	131740	609	131312	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATGTATCTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	13581012	13388183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466587_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904
ENSMUSG00000031012.18_13388184_13712327_1	chrX	-	2935	25	FSM	ENSMUSG00000031012.18	ENST00000646120.2	3225	25	-3	293	-3	-163	multi-exon	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATGTATCTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	13712327	13388183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13417185_13417222_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466587_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ENSMUSG00000031012.18_13388319_13475049_1	chrX	-	2121	19	ISM	ENSMUSG00000031012.18	ENST00000645986.2	4519	27	237785	1031	-82042	-298	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCTAGAGACTACCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	13475049	13388318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13388587_13392236_13392321_13398104_13398225_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972
ENSMUSG00000031012.18_13388319_13652288_1	chrX	-	2752	24	ISM	ENSMUSG00000031012.18	ENST00000378154.3	4002	25	60464	744	60036	-298	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCTAGAGACTACCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	13652288	13388318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466587_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175
ENSMUSG00000031012.18_13388485_13480829_1	chrX	-	2083	20	ISM	ENSMUSG00000031012.18	ENST00000645986.2	4519	27	232005	1197	-87822	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGACATCTGGAAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	13480829	13388484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13388587_13392236_13392321_13398104_13398225_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708
ENSMUSG00000031012.18_13388490_13712381_1	chrX	-	2716	25	FSM	ENSMUSG00000031012.18	ENST00000378154.3	4002	25	371	915	-34	-469	multi-exon	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAATCAGACATCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	13712381	13388489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466587_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ENSMUSG00000031012.18_13392250_13712531_1	chrX	-	2756	24	ISM	ENSMUSG00000031012.18	ENST00000378154.3	4002	25	221	4675	-184	-4229	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTAAATGAGGTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	13712531	13392249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13392321_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466587_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ENSMUSG00000031012.18_13399579_13492538_1	chrX	-	2060	19	ISM	ENSMUSG00000031012.18	ENST00000645986.2	4519	27	220296	12291	-99531	-11558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTCCGAGCCACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	13492538	13399578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433
ENSMUSG00000031012.18_13399579_13712659_1	chrX	-	2813	23	ISM	ENSMUSG00000031012.18	ENST00000378154.3	4002	25	93	12004	93	-11558	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTCCGAGCCACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	13712659	13399578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466587_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ENSMUSG00000031012.18_13399726_13712780_1	chrX	-	2787	23	ISM	ENSMUSG00000031012.18	ENST00000378154.3	4002	25	-28	12151	0	-11705	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATGACCAAATGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	13712780	13399725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466587_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ENSMUSG00000031012.18_13410788_13652269_1	chrX	-	2024	20	ISM	ENSMUSG00000031012.18	ENST00000645986.2	4519	27	60565	23500	60055	-22767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAAAGATAAATATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	13652269	13410787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175
ENSMUSG00000031012.18_13423252_13712780_1	chrX	-	2104	16	ISM	ENSMUSG00000031012.18	ENSMUST00000033321.11	4057	25	15	35682	0	-35231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGCTACAGAAAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	13712780	13423251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ENSMUSG00000031016.10_109721253_109738849_1	chr7	+	2023	10	ISM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	0	3644	0	-3644	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCGCAGAGCAGTTACG	NA	NA	NA	NA	NA	NA	NA	NA	109721252	109738849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768
ENSMUSG00000031016.10_109721358_109738902_1	chr7	+	1971	10	ISM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	105	3591	105	-3591	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTGCAGAAGTAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	109721357	109738902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768
ENSMUSG00000031016.10_109721474_109741259_1	chr7	+	1964	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	221	1234	221	-1234	multi-exon	TRUE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTCTCGACTTATTGG	NA	NA	NA	NA	NA	NA	NA	NA	109721473	109741259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ENSMUSG00000031016.10_109721637_109741414_1	chr7	+	1956	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	384	1079	384	-1079	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCCCATTGGTATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	109721636	109741414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ENSMUSG00000031016.10_109723694_109741957_1	chr7	+	1972	10	ISM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	2441	536	2441	-536	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAATATATAGCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	109723693	109741957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ENSMUSG00000031016.10_109723803_109742057_1	chr7	+	1963	10	ISM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	2550	436	2550	-436	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCTGTATTAATGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	109723802	109742057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ENSMUSG00000031016.10_109725283_109742270_1	chr7	+	1969	8	ISM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	4030	223	4030	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTTCTGACTATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	109725282	109742270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ENSMUSG00000031016.10_109725961_109742377_1	chr7	+	1930	7	ISM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	4708	116	4708	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTCACTTGTTTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	109725960	109742377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ENSMUSG00000031016.10_109726005_109742493_1	chr7	+	2002	7	ISM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	4752	0	4752	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAAATCTTCACGGTG	NA	NA	NA	NA	NA	NA	NA	NA	109726004	109742493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ENSMUSG00000031021.14_109335944_109342844_1	chr7	-	346	2	ISM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	8642	903	8642	-901	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGCTGGATGGAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	109342844	109335943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109336199_109342753
ENSMUSG00000031021.14_109342758_109351302_1	chr7	-	357	4	ISM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	184	7717	184	-7715	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTAAGTTCTGGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	109351302	109342757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109342889_109344516_109344626_109349219_109349312_109351277
ENSMUSG00000031021.14_109342816_109351350_1	chr7	-	347	4	ISM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	136	7775	136	-7773	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCTGAAGAGGCGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	109351350	109342815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109342889_109344516_109344626_109349219_109349312_109351277
ENSMUSG00000031021.14_109342853_109351453_1	chr7	-	413	4	ISM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	33	7812	33	-7810	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCTGTACATGGTATA	NA	NA	NA	NA	NA	NA	NA	NA	109351453	109342852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109342889_109344516_109344626_109349219_109349312_109351277
ENSMUSG00000031024.14_109123127_109145125_3	chr7	-	2876	17	FSM	ENSMUSG00000031024.14	ENST00000530991.5	2997	17	130	-9	130	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	109145125	109123126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109144912
ENSMUSG00000031024.14_109123127_109156569_1	chr7	-	3952	18	ISM	ENSMUSG00000031024.14	ENSMUST00000077909.9	4612	20	59391	0	-11314	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	109156569	109123126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417
ENSMUSG00000031024.14_109123266_109145223_1	chr7	-	2835	17	FSM	ENSMUSG00000031024.14	ENST00000530991.5	2997	17	32	130	32	-130	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTCCATCCTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	109145223	109123265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109144912
ENSMUSG00000031029.7_108533783_108537260_1	chr7	+	321	3	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	159	4898	159	-4898	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCTAAGAATATGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	108533782	108537260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_108534015_108536952_108537024_108537242
ENSMUSG00000031029.7_108533896_108537638_1	chr7	+	293	4	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	272	4520	272	-4520	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACACTCAGTGCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	108533895	108537638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_108534015_108536952_108537024_108537242_108537323_108537615
ENSMUSG00000031029.7_108533939_108537698_1	chr7	+	310	4	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	315	4460	315	-4460	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGGTGGACACAGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	108533938	108537698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_108534015_108536952_108537024_108537242_108537323_108537615
ENSMUSG00000031029.7_108533993_108537748_1	chr7	+	306	4	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	369	4410	369	-4410	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGTGAGCCCTGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	108533992	108537748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_108534015_108536952_108537024_108537242_108537323_108537615
ENSMUSG00000031029.7_108537279_108539884_1	chr7	+	308	4	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	3655	2274	3655	-2274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGTGATTGGACTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	108537278	108539884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_108537323_108537615_108537754_108539396_108539489_108539850
ENSMUSG00000031029.7_108539394_108540215_1	chr7	+	347	3	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	5770	1943	5770	-1943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCCGTGGCTGCACCC	NA	NA	NA	NA	NA	NA	NA	NA	108539393	108540215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_108539489_108539850_108539988_108540100
ENSMUSG00000031029.7_108539436_108540689_1	chr7	+	326	4	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	5812	1469	5812	-1469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAATCTCACCCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	108539435	108540689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_108539489_108539850_108539988_108540100_108540215_108540667
ENSMUSG00000031029.7_108539849_108540771_1	chr7	+	357	3	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	6225	1387	6225	-1387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGAGGTTTTCACCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	108539848	108540771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_108539988_108540100_108540215_108540667
ENSMUSG00000031059.10_20481565_20483730_1	chrX	-	780	3	FSM	ENSMUSG00000031059.10	ENSMUST00000116621.2	908	3	128	0	128	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGTTACTGCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	20483730	20481564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_20481782_20481952_20482084_20483298
ENSMUSG00000031060.17_20484022_20516923_1	chrX	+	2955	23	FSM	ENSMUSG00000031060.17	ENSMUST00000084383.10	3172	23	0	217	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTTGAAAGCAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	20484021	20516923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ENSMUSG00000031060.17_20486337_20517141_1	chrX	+	2780	22	FSM	ENSMUSG00000031060.17	ENSMUST00000082089.14	2562	22	0	-218	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCATGTCCTAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	20486336	20517141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ENSMUSG00000031065.15_20554238_20565532_1	chrX	+	2501	16	NNC	ENSMUSG00000031065.15	novel	3116	16	NA	NA	27	-582	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1030	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCCTTTGAGAGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	20554237	20565532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_20554601_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561943_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ENSMUSG00000031065.15_20554238_20565545_1	chrX	+	2520	16	FSM	ENSMUSG00000031065.15	ENST00000457458.6	3116	16	27	569	27	-569	multi-exon	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGGGACCCAGACCCTA	NA	NA	NA	NA	NA	NA	NA	NA	20554237	20565545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_20554601_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ENSMUSG00000031065.15_20554409_20565628_1	chrX	+	2428	16	NNC	ENSMUSG00000031065.15	novel	3116	16	NA	NA	198	-486	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTCCCCTACCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	20554408	20565628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_20554601_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564851
ENSMUSG00000031065.15_20554545_20565766_1	chrX	+	2423	15	NNC	ENSMUSG00000031065.15	novel	3116	16	NA	NA	-112	-348	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCAGCTCTGCCTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	20554544	20565766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_20554601_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563326_20563450_20564689_20564768_20564847
ENSMUSG00000031065.15_20554876_20559659_1	chrX	+	267	2	ISM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	219	6460	219	-6455	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCCTGGATGAGAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	20554875	20559659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20555046_20559562
ENSMUSG00000031065.15_20554922_20559730_1	chrX	+	292	2	ISM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	265	6389	265	-6384	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTCGCTCTGTTCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	20554921	20559730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20555046_20559562
ENSMUSG00000031065.15_20559650_20565866_1	chrX	+	2391	15	ISM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	4993	253	4993	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGCACAAGCAGGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	20559649	20565866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ENSMUSG00000031065.15_20560273_20566119_1	chrX	+	2527	14	ISM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	5616	0	5616	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	20560272	20566119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ENSMUSG00000031065.15_20560327_20566119_1	chrX	+	2462	13	NNC	ENSMUSG00000031065.15	novel	3270	16	NA	NA	5670	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	20560326	20566119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563326_20563450_20564689_20564768_20564847
ENSMUSG00000031066.11_20570199_20585603_1	chrX	+	2457	19	NIC	ENSMUSG00000031066.11	novel	3237	21	NA	NA	54	-913	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1047	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTCATCGCAGTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	20570198	20585603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584275_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537
ENSMUSG00000031066.11_20570199_20585847_1	chrX	+	2523	20	NIC	ENSMUSG00000031066.11	novel	3237	21	NA	NA	54	-669	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAAGGACAGTGGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	20570198	20585847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584275_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831
ENSMUSG00000031066.11_20570312_20585870_1	chrX	+	2433	20	NIC	ENSMUSG00000031066.11	novel	3237	21	NA	NA	167	-646	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACTTTGATGACAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	20570311	20585870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584275_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831
ENSMUSG00000031066.11_20578064_20586065_1	chrX	+	2421	20	NIC	ENSMUSG00000031066.11	novel	2953	20	NA	NA	77	-451	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCATCTGACACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	20578063	20586065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chrX_+_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584275_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ENSMUSG00000031066.11_20579106_20586414_1	chrX	+	2457	17	NIC	ENSMUSG00000031066.11	novel	2953	20	NA	NA	1119	-102	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTAGTGGCTGATACT	NA	NA	NA	NA	NA	NA	NA	NA	20579105	20586414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chrX_+_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584275_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ENSMUSG00000031066.11_20579351_20586517_1	chrX	+	2447	16	NIC	ENSMUSG00000031066.11	novel	2953	20	NA	NA	1364	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCATGTTCAACAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	20579350	20586517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chrX_+_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584275_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ENSMUSG00000031068.9_137046756_137054465_1	chr7	+	101	2	ISM	ENSMUSG00000031068.9	ENSMUST00000211496.2	3440	10	7372	14229	7372	-14229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGCTCTGTCCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	137046755	137054465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_137046817_137054425
ENSMUSG00000031070.16_144854565_144862270_1	chr7	+	1063	3	FSM	ENSMUSG00000031070.16	ENSMUST00000033386.12	2087	3	0	1024	0	-816	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTATCTGCATCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	144854564	144862270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_144854730_144857550_144857666_144861487
ENSMUSG00000031070.16_144857618_144862412_1	chr7	+	977	2	NNC	ENSMUSG00000031070.16	novel	2087	3	NA	NA	2982	-674	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCACACCCAACACGGTC	NA	NA	NA	NA	NA	NA	NA	NA	144857617	144862412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_144857670_144861487
ENSMUSG00000031072.15_144468837_144484372_1	chr7	+	2118	4	FSM	ENSMUSG00000031072.15	ENSMUST00000128057.8	2231	4	0	113	0	-113	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAATACAGCGGTAATCA	NA	NA	NA	NA	NA	NA	NA	NA	144468836	144484372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_144469067_144470164_144470271_144471346_144471418_144482661
ENSMUSG00000031072.15_144468917_144484485_1	chr7	+	2151	4	FSM	ENSMUSG00000031072.15	ENSMUST00000128057.8	2231	4	80	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCTGACATTGTAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	144468916	144484485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_144469067_144470164_144470271_144471346_144471418_144482661
ENSMUSG00000031077.8_144132402_144136200_1	chr7	-	2556	2	FSM	ENSMUSG00000031077.8	ENSMUST00000033394.8	3903	2	0	1347	0	-1347	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTTGTACAGCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	144136200	144132401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_144134598_144135840
ENSMUSG00000031078.16_143989472_143995584_1	chr7	-	1844	5	ISM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	28898	2	28898	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGTGATCTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	143995584	143989471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435
ENSMUSG00000031078.16_143989768_144005805_1	chr7	-	1827	9	ISM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	18941	296	18677	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGCTTCCTTGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	144005805	143989767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763
ENSMUSG00000031078.16_143989866_144005850_1	chr7	-	1779	9	NNC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	18632	-394	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTCTTTTTGCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	144005850	143989865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004709_144004826_144005763
ENSMUSG00000031078.16_143989913_144006324_1	chr7	-	1791	10	ISM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	18422	441	18158	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGGGAGATAGATAGC	NA	NA	NA	NA	NA	NA	NA	NA	144006324	143989912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284
ENSMUSG00000031078.16_143990028_144008441_1	chr7	-	1776	11	ISM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	16305	556	16041	-556	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGGCTTATCCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	144008441	143990027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412
ENSMUSG00000031078.16_143990080_144008514_1	chr7	-	1802	11	NNC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	15968	-608	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCCCATTGCATTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	144008514	143990079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004709_144004826_144005763_144005875_144006284_144006396_144008412
ENSMUSG00000031078.16_143990180_144011426_1	chr7	-	1782	13	ISM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	13320	708	13056	-708	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACCCCATGCTTCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	144011426	143990179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405
ENSMUSG00000031078.16_143990315_144014963_1	chr7	-	1785	14	ISM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	9783	843	9519	-843	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTGGCCACTCAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	144014963	143990314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915
ENSMUSG00000031078.16_143990455_144017095_1	chr7	-	1783	15	ISM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	7651	983	7387	-983	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTTAGTTTTGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	144017095	143990454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039
ENSMUSG00000031078.16_143990621_144019784_1	chr7	-	1816	17	ISM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	4962	1149	4698	-1149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTCTGTTTTTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	144019784	143990620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690
ENSMUSG00000031078.16_143990757_144008523_1	chr7	-	1018	10	ISM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	15959	1287	15959	-1285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAAGGGCAGATACGGGC	NA	NA	NA	NA	NA	NA	NA	NA	144008523	143990756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412
ENSMUSG00000031078.16_143990757_144024482_2	chr7	-	1737	18	FSM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	264	1285	0	-1285	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAAGGGCAGATACGGGC	NA	NA	NA	NA	NA	NA	NA	NA	144024482	143990756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ENSMUSG00000031078.16_143991714_144024627_1	chr7	-	1772	17	ISM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	119	2242	119	-2242	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCGCCCTGTATGACTA	NA	NA	NA	NA	NA	NA	NA	NA	144024627	143991713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ENSMUSG00000031078.16_143992523_144011516_1	chr7	-	1010	10	ISM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	12966	3053	12966	-3051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGCCACTATCAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	144011516	143992522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405
ENSMUSG00000031078.16_143992523_144024746_1	chr7	-	1827	16	ISM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	0	3051	0	-3051	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGCCACTATCAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	144024746	143992522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ENSMUSG00000031078.16_143993752_144015045_1	chr7	-	988	10	ISM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	9437	4282	9437	-4280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGGTGAGTAGTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	144015045	143993751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915
ENSMUSG00000031078.16_143999540_144019784_1	chr7	-	1010	11	ISM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	4698	10070	4698	-10068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCCTGGCAGTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	144019784	143999539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690
ENSMUSG00000031097.16_141995553_141998147_1	chr7	+	721	7	NNC	ENSMUSG00000031097.16	novel	732	8	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGGTCTAGTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	141995552	141998147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_141995606_141996205_141996240_141996907_141996950_141997039_141997169_141997307_141997398_141997642_141997820_141997951
ENSMUSG00000031099.17_46898247_46915413_1	chrX	-	1338	5	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	65992	-2	65896	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATTTCCTGTTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	46915413	46898246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46899067_46900003_46900146_46912241_46912455_46912566_46912686_46915369
ENSMUSG00000031099.17_46898716_46938816_1	chrX	-	1330	9	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	42589	467	42493	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTATTTTGTGCATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	46938816	46898715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46899067_46900003_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792
ENSMUSG00000031099.17_46898933_46941484_1	chrX	-	1371	11	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	39921	684	39825	-423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCCTAAAGCCTAGAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	46941484	46898932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46899067_46900003_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471
ENSMUSG00000031099.17_46899006_46941526_1	chrX	-	1340	11	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	39879	757	39783	-496	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTTAGTCACAGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	46941526	46899005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46899067_46900003_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471
ENSMUSG00000031099.17_46899055_46941584_1	chrX	-	1349	11	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	39821	806	39725	-545	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCATTTAAAAGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	46941584	46899054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46899067_46900003_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471
ENSMUSG00000031099.17_46900044_46943461_1	chrX	-	1336	11	ISM	ENSMUSG00000031099.17	ENSMUST00000088973.11	4798	23	37968	1534	37848	-1534	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCAATGGTAAAATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	46943461	46900043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442
ENSMUSG00000031099.17_46900097_46943511_1	chrX	-	1333	11	ISM	ENSMUSG00000031099.17	ENSMUST00000088973.11	4798	23	37918	1587	37798	-1587	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGGAAATTGAGGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	46943511	46900096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442
ENSMUSG00000031099.17_46912329_46947159_1	chrX	-	1344	12	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	34246	14080	34150	-13819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATGTATATGAAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	46947159	46912328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46944454_46944491_46947132
ENSMUSG00000031099.17_46912393_46947213_1	chrX	-	1334	12	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	34192	14144	34096	-13883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTATACTGAAGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	46947213	46912392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46944454_46944491_46947132
ENSMUSG00000031099.17_46912568_46949318_1	chrX	-	1333	12	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	32087	14319	31991	-14058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTATATTCTATTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	46949318	46912567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46944454_46944491_46947132_46947255_46949297
ENSMUSG00000031099.17_46912629_46949370_1	chrX	-	1324	12	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	32035	14380	31939	-14119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAACGTGGAGAAGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	46949370	46912628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46944454_46944491_46947132_46947255_46949297
ENSMUSG00000031099.17_46912648_46949465_1	chrX	-	1400	12	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	31940	14399	31844	-14138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAATTATGGCTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	46949465	46912647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46944454_46944491_46947132_46947255_46949297
ENSMUSG00000031099.17_46917735_46950265_1	chrX	-	1399	11	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	31140	19486	31044	-19225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTATTTTAAGTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	46950265	46917734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46944454_46944491_46947132_46947255_46949297_46949525_46950155
ENSMUSG00000031099.17_46930453_46964140_1	chrX	-	1405	12	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	17265	32204	17169	-31943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATTCTTTATTATCG	NA	NA	NA	NA	NA	NA	NA	NA	46964140	46930452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46944454_46944491_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040
ENSMUSG00000031099.17_46930807_46965295_1	chrX	-	1375	12	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	16110	32558	16014	-32297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCGAGCCAAAGATCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	46965295	46930806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46944454_46944491_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261
ENSMUSG00000031099.17_46938793_46965417_1	chrX	-	1407	11	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	15988	40544	15892	24414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAATACTTTCAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	46965417	46938792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46944454_46944491_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261
ENSMUSG00000031099.17_46940542_46968394_1	chrX	-	1339	11	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	13011	42293	12915	22665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAAGAGGAGAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	46968394	46940541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46940671_46941471_46941605_46943442_46943596_46944454_46944491_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322
ENSMUSG00000031099.17_46940623_46968465_1	chrX	-	1329	11	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	12940	42374	12844	22584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAATGATCCGTCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	46968465	46940622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46940671_46941471_46941605_46943442_46943596_46944454_46944491_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322
ENSMUSG00000031099.17_46941471_46972325_1	chrX	-	1420	11	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	9080	43222	8984	21736	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTATGTAGAAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	46972325	46941470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46941605_46943442_46943596_46944454_46944491_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224
ENSMUSG00000031099.17_46943541_46972957_1	chrX	-	1333	12	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	8448	45292	8352	19666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTAGGGCTGGAGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	46972957	46943540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46943596_46944454_46944491_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913
ENSMUSG00000031099.17_46947208_46976032_1	chrX	-	1334	11	ISM	ENSMUSG00000031099.17	ENST00000371123.5	3959	24	5350	48958	5277	15999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGGATTATTGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	46976032	46947207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975988
ENSMUSG00000031099.17_46949434_46981273_1	chrX	-	1365	11	ISM	ENSMUSG00000031099.17	ENST00000371123.5	3959	24	109	51184	36	13773	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGTGTTGTAATCATCC	NA	NA	NA	NA	NA	NA	NA	NA	46981273	46949433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975988_46976076_46981102
ENSMUSG00000031099.17_46950154_46981396_1	chrX	-	1399	10	ISM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	9	51905	0	13053	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAATTTTACATCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	46981396	46950153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975988_46976076_46981102
ENSMUSG00000031105.17_47712642_47726306_1	chrX	+	441	5	ISM	ENSMUSG00000031105.17	ENST00000543953.5	1362	10	22	24868	0	-24863	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTGATTTCCTCTACTA	NA	NA	NA	NA	NA	NA	NA	NA	47712641	47726306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47712706_47718128_47718223_47719765_47719914_47723633_47723729_47726266
ENSMUSG00000031107.7_47797779_47798748_1	chrX	+	468	2	ISM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	13898	852	13898	-852	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCGAGGAGAAGAGCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	47797778	47798748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47797951_47798452
ENSMUSG00000031107.7_47797863_47798814_1	chrX	+	450	2	ISM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	13982	786	13982	-786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCATTCTGATGGGCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	47797862	47798814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47797951_47798452
ENSMUSG00000031107.7_47797905_47798884_1	chrX	+	478	2	ISM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	14024	716	14024	-716	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTACAGGCACTCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	47797904	47798884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47797951_47798452
ENSMUSG00000031109.17_48098584_48114221_1	chrX	-	2416	5	ISM	ENSMUSG00000031109.17	ENSMUST00000114912.8	3167	15	262898	-751	55405	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAACCTTGCTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	48114221	48098583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48100512_48102373_48102460_48107659_48107772_48111970_48112079_48114039
ENSMUSG00000031109.17_48098727_48129472_1	chrX	-	2353	6	ISM	ENSMUSG00000031109.17	ENSMUST00000114912.8	3167	15	247647	-608	40154	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAAAGCTTTGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	48129472	48098726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48100512_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392
ENSMUSG00000031109.17_48098856_48140690_1	chrX	-	2341	7	ISM	ENSMUSG00000031109.17	ENSMUST00000114912.8	3167	15	236429	-479	28936	-249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAGGAAACCATTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	48140690	48098855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48100512_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608
ENSMUSG00000031109.17_48099046_48142772_1	chrX	-	2363	8	ISM	ENSMUSG00000031109.17	ENSMUST00000114912.8	3167	15	234347	-289	26854	289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATGTGATCAGTATGCA	NA	NA	NA	NA	NA	NA	NA	NA	48142772	48099045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48100512_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585
ENSMUSG00000031109.17_48099335_48145445_1	chrX	-	2334	9	ISM	ENSMUSG00000031109.17	ENSMUST00000114912.8	3167	15	231674	0	24181	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACAGGGACTCCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	48145445	48099334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48100512_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211
ENSMUSG00000031109.17_48099459_48151154_1	chrX	-	2345	10	ISM	ENSMUSG00000031109.17	ENSMUST00000114912.8	3167	15	225965	124	18472	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTCAATGCTGGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	48151154	48099458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48100512_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019
ENSMUSG00000031109.17_48099601_48158667_1	chrX	-	2431	11	ISM	ENSMUSG00000031109.17	ENSMUST00000114912.8	3167	15	218452	266	10959	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGGCACATGTGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	48158667	48099600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48100512_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511
ENSMUSG00000031109.17_48099702_48158667_1	chrX	-	2330	11	ISM	ENSMUSG00000031109.17	ENSMUST00000114912.8	3167	15	218452	367	10959	192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTATGACTACTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	48158667	48099701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48100512_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511
ENSMUSG00000031109.17_48099894_48257661_1	chrX	-	2417	13	ISM	ENSMUSG00000031109.17	ENSMUST00000114912.8	3167	15	119458	559	-88030	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACCCATCTGTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	48257661	48099893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48100512_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517
ENSMUSG00000031109.17_48100065_48377089_1	chrX	-	2407	15	FSM	ENSMUSG00000031109.17	ENSMUST00000114912.8	3167	15	30	730	0	-171	multi-exon	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACCTTGTACTTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	48377089	48100064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_48100512_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375732_48375782_48376977
ENSMUSG00000031111.17_48871413_48875830_1	chrX	-	2067	8	ISM	ENSMUSG00000031111.17	ENSMUST00000114893.8	2671	11	1290	0	1290	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTAGTGGTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	48875830	48871412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48871830_48871976_48872101_48872488_48872768_48872898_48873187_48873382_48873671_48873848_48874137_48874864_48875153_48875735
ENSMUSG00000031111.17_48871413_48875902_1	chrX	-	2139	8	ISM	ENSMUSG00000031111.17	ENSMUST00000114893.8	2671	11	1218	0	1218	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTAGTGGTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	48875902	48871412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48871830_48871976_48872101_48872488_48872768_48872898_48873187_48873382_48873671_48873848_48874137_48874864_48875153_48875735
ENSMUSG00000031111.17_48871581_48875973_1	chrX	-	2042	8	ISM	ENSMUSG00000031111.17	ENSMUST00000114893.8	2671	11	1147	168	1147	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGAGTTGGGTCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	48875973	48871580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48871830_48871976_48872101_48872488_48872768_48872898_48873187_48873382_48873671_48873848_48874137_48874864_48875153_48875735
ENSMUSG00000031111.17_48871762_48876386_1	chrX	-	2054	9	ISM	ENSMUSG00000031111.17	ENSMUST00000114893.8	2671	11	734	349	734	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTACCACCAATTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	48876386	48871761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48871830_48871976_48872101_48872488_48872768_48872898_48873187_48873382_48873671_48873848_48874137_48874864_48875153_48875735_48876015_48876234
ENSMUSG00000031111.17_48871976_48876525_1	chrX	-	2126	8	ISM	ENSMUSG00000031111.17	ENSMUST00000114893.8	2671	11	595	563	595	-525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATACTCACTCAGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	48876525	48871975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48872101_48872488_48872768_48872898_48873187_48873382_48873671_48873848_48874137_48874864_48875153_48875735_48876015_48876234
ENSMUSG00000031111.17_48872022_48874015_1	chrX	-	813	4	ISM	ENSMUSG00000031111.17	ENST00000652189.1	4129	19	12744	571	3105	-571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTAGCCGTAGAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	48874015	48872021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48872101_48872488_48872768_48872898_48873187_48873848
ENSMUSG00000031111.17_48872488_48877120_1	chrX	-	2131	9	ISM	ENSMUSG00000031111.17	ENSMUST00000114893.8	2671	11	0	1075	0	-1037	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGATAATGCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	48877120	48872487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48872768_48872898_48873187_48873382_48873671_48873848_48874137_48874864_48875153_48875735_48876015_48876234_48876526_48876909_48876943_48877024
ENSMUSG00000031111.17_48872630_48874963_1	chrX	-	813	4	ISM	ENSMUSG00000031111.17	ENST00000652189.1	4129	19	11796	1179	2157	-1179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTCCGAGGATGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	48874963	48872629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48872768_48872898_48873187_48873848_48874137_48874864
ENSMUSG00000031111.17_48873132_48875914_1	chrX	-	810	4	ISM	ENSMUSG00000031111.17	ENST00000652189.1	4129	19	10845	1681	1206	-1681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACGTGACTCTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	48875914	48873131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48873187_48873848_48874137_48874864_48875153_48875735
ENSMUSG00000031111.17_48873413_48880316_1	chrX	-	2061	10	ISM	ENSMUSG00000031111.17	ENST00000370904.6	4379	19	6278	1990	-3196	1811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCAACACTCTGGAACTC	NA	NA	NA	NA	NA	NA	NA	NA	48880316	48873412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48873671_48873848_48874137_48874864_48875153_48875735_48876015_48876234_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879671_48880163
ENSMUSG00000031111.17_48873471_48880361_1	chrX	-	2048	10	ISM	ENSMUSG00000031111.17	ENST00000370904.6	4379	19	6233	2048	-3241	1753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGACGTTATAGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	48880361	48873470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48873671_48873848_48874137_48874864_48875153_48875735_48876015_48876234_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879671_48880163
ENSMUSG00000031111.17_48873537_48880413_1	chrX	-	2034	10	ISM	ENSMUSG00000031111.17	ENST00000370904.6	4379	19	6181	2114	-3293	1687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGCTTTGGGGGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	48880413	48873536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48873671_48873848_48874137_48874864_48875153_48875735_48876015_48876234_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879671_48880163
ENSMUSG00000031111.17_48875094_48883422_1	chrX	-	2054	11	ISM	ENSMUSG00000031111.17	ENST00000370904.6	4379	19	3172	3671	819	130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTGACTTTCAATTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	48883422	48875093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48875153_48875735_48876015_48876234_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879671_48880163_48880458_48880691_48880977_48882780_48883069_48883368
ENSMUSG00000031111.17_48875787_48883554_1	chrX	-	2076	10	ISM	ENSMUSG00000031111.17	ENST00000370904.6	4379	19	3040	4364	687	-563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTCAAGTGGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	48883554	48875786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48876015_48876234_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879671_48880163_48880458_48880691_48880977_48882780_48883069_48883368
ENSMUSG00000031111.17_48876327_48886612_1	chrX	-	2064	11	ISM	ENSMUSG00000031111.17	ENST00000370904.6	4379	19	-18	4904	10	-1103	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCACAGCCACACCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	48886612	48876326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879671_48880163_48880458_48880691_48880977_48882780_48883069_48883368_48883651_48884155_48884285_48886529
ENSMUSG00000031112.11_49930318_49980470_1	chrX	+	1773	12	NNC	ENSMUSG00000031112.11	novel	1776	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTTAATTTTAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	49930317	49980470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_49930424_49930555_49930713_49959132_49959364_49968330_49968423_49974465_49974575_49974663_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978568_49978629_49978709_49978847_49980176
ENSMUSG00000031112.11_49930318_49980470_2	chrX	+	1776	12	FSM	ENSMUSG00000031112.11	ENST00000481105.5	1776	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTTAATTTTAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	49930317	49980470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_49930424_49930555_49930713_49959132_49959364_49968330_49968423_49974465_49974575_49974663_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUSG00000031112.11_49930596_49980725_1	chrX	+	1619	10	ISM	ENSMUSG00000031112.11	ENST00000394335.6	3010	11	275	1248	-67	255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAACCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	49930595	49980725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_49930713_49968365_49968423_49974465_49974575_49974663_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUSG00000031112.11_49930695_49978763_1	chrX	+	933	9	ISM	ENSMUSG00000031112.11	ENST00000496850.1	1192	10	32	1557	32	-1557	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAAGTATTGCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	49930694	49978763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_49930713_49959132_49959364_49968365_49968423_49974465_49974575_49974663_49974822_49976737_49976887_49977892_49977987_49978565_49978629_49978709
ENSMUSG00000031112.11_49959213_49980221_1	chrX	+	963	9	ISM	ENSMUSG00000031112.11	ENST00000496850.1	1192	10	28550	99	28550	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTCTGTTTCATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	49959212	49980221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_49959364_49968365_49968423_49974465_49974575_49974663_49974822_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUSG00000031112.11_49959273_49980263_1	chrX	+	945	9	ISM	ENSMUSG00000031112.11	ENST00000496850.1	1192	10	28610	57	28610	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCAACCTTATAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	49959272	49980263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_49959364_49968365_49968423_49974465_49974575_49974663_49974822_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUSG00000031112.11_49959329_49980309_1	chrX	+	935	9	ISM	ENSMUSG00000031112.11	ENST00000496850.1	1192	10	28666	11	28666	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCTTTGCCACATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	49959328	49980309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_49959364_49968365_49968423_49974465_49974575_49974663_49974822_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUSG00000031112.11_49974662_49980904_1	chrX	+	1517	7	ISM	ENSMUSG00000031112.11	ENST00000481105.5	1776	12	44344	-434	43999	434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAACCCTTATTTAACATT	NA	NA	NA	NA	NA	NA	NA	NA	49974661	49980904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUSG00000031112.11_49974690_49980978_1	chrX	+	1563	7	ISM	ENSMUSG00000031112.11	ENST00000481105.5	1776	12	44372	-508	44027	508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTCAGCTCAAATCACA	NA	NA	NA	NA	NA	NA	NA	NA	49974689	49980978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUSG00000031112.11_49974756_49981018_1	chrX	+	1537	7	ISM	ENSMUSG00000031112.11	ENST00000481105.5	1776	12	44438	-548	44093	548	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTTTAACAACCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	49974755	49981018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUSG00000031112.11_49975567_49981137_1	chrX	+	1551	6	ISM	ENSMUSG00000031112.11	ENST00000481105.5	1776	12	45249	-667	44904	667	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTTATAATTATCCA	NA	NA	NA	NA	NA	NA	NA	NA	49975566	49981137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUSG00000031112.11_49975629_49981183_1	chrX	+	1535	6	ISM	ENSMUSG00000031112.11	ENST00000481105.5	1776	12	45311	-713	44966	713	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGGGTATTTAAATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	49975628	49981183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUSG00000031112.11_49976781_49981314_1	chrX	+	1538	5	ISM	ENSMUSG00000031112.11	ENST00000496850.1	1192	10	46118	-994	46118	-659	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGCCTTTTTTAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	49976780	49981314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUSG00000031112.11_49976807_49981390_1	chrX	+	1588	5	ISM	ENSMUSG00000031112.11	ENST00000394335.6	3010	11	46486	583	46144	-583	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGAATTGTTGGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	49976806	49981390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUSG00000031112.11_49977968_49981511_1	chrX	+	1554	4	ISM	ENSMUSG00000031112.11	ENST00000394335.6	3010	11	47647	462	47305	-462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACATTGTACAAGTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	49977967	49981511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUSG00000031112.11_49978830_49981695_1	chrX	+	1536	2	ISM	ENSMUSG00000031112.11	ENST00000394335.6	3010	11	48509	278	48167	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTTTTTTTGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	49978829	49981695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_49978847_49980176
ENSMUSG00000031125.3_55181932_55198858_1	chrX	+	1012	8	NNC	ENSMUSG00000031125.3	novel	1022	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGCAAATAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	55181931	55198858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_55181986_55183330_55183457_55183770_55183835_55184104_55184140_55192435_55192554_55193247_55193348_55198014_55198104_55198432
ENSMUSG00000031129.10_94567221_95110993_1	chr9	+	1522	15	ISM	ENSMUSG00000031129.10	ENSMUST00000033463.10	3468	16	15259	1505	15259	-1505	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCTGGACCAGAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	94567220	95110993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_94567311_94593396_94593475_94594947_94595025_94691979_94692096_94737743_94737850_94818362_94818502_94821508_94821615_94842450_94842540_94901157_94901272_94902653_94902766_94937464_94937619_95005063_95005116_95019953_95020034_95109240_95109347_95110890
ENSMUSG00000031129.10_94737775_95111386_1	chr9	+	1523	11	ISM	ENSMUSG00000031129.10	ENSMUST00000033463.10	3468	16	185813	1112	185813	-1112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACCATATGTGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	94737774	95111386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_94737850_94818362_94818502_94821508_94821615_94842450_94842540_94901157_94901272_94902653_94902766_94937464_94937619_95005063_95005116_95019953_95020034_95109240_95109347_95110890
ENSMUSG00000031129.10_94818424_95111510_1	chr9	+	1511	10	ISM	ENSMUSG00000031129.10	ENSMUST00000033463.10	3468	16	266462	988	266462	-988	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAAAACTCCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	94818423	95111510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_94818502_94821508_94821615_94842450_94842540_94901157_94901272_94902653_94902766_94937464_94937619_95005063_95005116_95019953_95020034_95109240_95109347_95110890
ENSMUSG00000031129.10_94821540_95111625_1	chr9	+	1517	9	ISM	ENSMUSG00000031129.10	ENSMUST00000033463.10	3468	16	269578	873	269578	-873	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTGGAGAATTCACATG	NA	NA	NA	NA	NA	NA	NA	NA	94821539	95111625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_94821615_94842450_94842540_94901157_94901272_94902653_94902766_94937464_94937619_95005063_95005116_95019953_95020034_95109240_95109347_95110890
ENSMUSG00000031129.10_94901188_95111823_1	chr9	+	1521	7	ISM	ENSMUSG00000031129.10	ENSMUST00000033463.10	3468	16	349226	675	349226	-675	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTTCCTTGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	94901187	95111823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_94901272_94902653_94902766_94937464_94937619_95005063_95005116_95019953_95020034_95109240_95109347_95110890
ENSMUSG00000031129.10_94937568_95112114_1	chr9	+	1513	5	ISM	ENSMUSG00000031129.10	ENSMUST00000033463.10	3468	16	385606	384	385606	-384	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCATGACTCGTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	94937567	95112114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_94937619_95005063_95005116_95019953_95020034_95109240_95109347_95110890
ENSMUSG00000031132.2_56263082_56268961_1	chrX	+	448	2	ISM	ENSMUSG00000031132.2	ENST00000370628.2	1698	4	5589	942	5579	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTGCAGCAGGGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	56263081	56268961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_56263139_56268570
ENSMUSG00000031134.17_56431718_56434853_1	chrX	-	1435	5	ISM	ENSMUSG00000031134.17	ENSMUST00000114730.8	2019	9	3469	0	2182	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGAAGCTGCAAACCGAT	NA	NA	NA	NA	NA	NA	NA	NA	56434853	56431717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_56432754_56433420_56433504_56433881_56434008_56434104_56434220_56434778
ENSMUSG00000031134.17_56431916_56435475_1	chrX	-	1367	6	ISM	ENSMUSG00000031134.17	ENSMUST00000114730.8	2019	9	2847	198	1560	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCGATGCCTAGGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	56435475	56431915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_56432754_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423
ENSMUSG00000031134.17_56432022_56436670_1	chrX	-	1420	7	ISM	ENSMUSG00000031134.17	ENSMUST00000114730.8	2019	9	1652	304	365	254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGAGAGGGTTGGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	56436670	56432021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_56432754_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631
ENSMUSG00000031134.17_56432073_56436726_1	chrX	-	1425	7	ISM	ENSMUSG00000031134.17	ENSMUST00000114730.8	2019	9	1596	355	309	203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTCCACTGAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	56436726	56432072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_56432754_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631
ENSMUSG00000031134.17_56432173_56436724_1	chrX	-	1323	7	ISM	ENSMUSG00000031134.17	ENSMUST00000114730.8	2019	9	1598	455	311	103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTCCCTGAAGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	56436724	56432172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_56432754_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631
ENSMUSG00000031134.17_56432276_56438322_1	chrX	-	1480	9	FSM	ENSMUSG00000031134.17	ENSMUST00000114726.8	2108	9	74	554	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACGTGTTTAATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	56438322	56432275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_56432754_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437062_56438211
ENSMUSG00000031137.18_58108318_58177310_1	chrX	-	1126	4	ISM	ENSMUSG00000031137.18	ENSMUST00000033473.12	2499	5	2486	813	2486	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGGGTTGAATCTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	58177310	58108317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_58109030_58112760_58112960_58171253_58171358_58177199
ENSMUSG00000031137.18_58108437_58296271_1	chrX	-	1120	5	FSM	ENSMUSG00000031137.18	ENST00000441825.8	1291	5	55	116	55	-116	multi-exon	FALSE	canonical	NA	NA	NA	NA	2687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTGTTTTCTATCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	58296271	58108436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_58109030_58112760_58112960_58171253_58171358_58177199_58177311_58296158
ENSMUSG00000031137.18_58108850_58112960_1	chrX	-	380	2	ISM	ENSMUSG00000031137.18	ENSMUST00000033473.12	2499	5	66836	1345	66836	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGCTGTTGAATTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	58112960	58108849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_58109030_58112760
ENSMUSG00000031137.18_58108961_58171309_1	chrX	-	324	3	ISM	ENSMUSG00000031137.18	ENSMUST00000033473.12	2499	5	8487	1456	8487	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGAGCAGAAGCGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	58171309	58108960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_58109030_58112760_58112960_58171253
ENSMUSG00000031137.18_58112901_58296221_1	chrX	-	337	4	ISM	ENSMUSG00000031137.18	ENST00000436198.5	867	5	106	4155	105	-4155	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTCATCAATGATCTACC	NA	NA	NA	NA	NA	NA	NA	NA	58296221	58112900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_58112960_58171253_58171358_58177199_58177311_58296158
ENSMUSG00000031138.5_59044824_59064431_1	chrX	+	539	5	NNC	ENSMUSG00000031138.5	novel	1302	7	NA	NA	0	-10370	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	200	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTCTTAATAACGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	59044823	59064431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_59044912_59049196_59049361_59049767_59049793_59061521_59061651_59064298
ENSMUSG00000031138.5_59044824_59064431_2	chrX	+	540	5	ISM	ENSMUSG00000031138.5	ENST00000394090.2	1302	7	0	10370	0	-10370	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTCTTAATAACGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	59044823	59064431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_59044912_59049196_59049361_59049767_59049793_59061521_59061651_59064297
ENSMUSG00000031138.5_59049201_59073830_1	chrX	+	583	5	ISM	ENSMUSG00000031138.5	ENST00000394090.2	1302	7	4377	971	4377	-971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGCCATCATTAATGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	59049200	59073830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_59049361_59049767_59049793_59061521_59061651_59064297_59064531_59073794
ENSMUSG00000031138.5_59049285_59073862_1	chrX	+	531	5	ISM	ENSMUSG00000031138.5	ENST00000394090.2	1302	7	4461	939	4461	-939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCCCACTGTCTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	59049284	59073862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_59049361_59049767_59049793_59061521_59061651_59064297_59064531_59073794
ENSMUSG00000031138.5_59049772_59074279_1	chrX	+	524	5	ISM	ENSMUSG00000031138.5	ENST00000394090.2	1302	7	4948	522	4948	-522	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACACAGAACAAAGGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	59049771	59074279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_59049793_59061521_59061651_59064297_59064531_59073794_59073910_59074253
ENSMUSG00000031138.5_59061591_59074375_1	chrX	+	530	4	ISM	ENSMUSG00000031138.5	ENST00000394090.2	1302	7	16767	426	16767	-426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGATAAACCTTTAATACT	NA	NA	NA	NA	NA	NA	NA	NA	59061590	59074375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_59061651_59064297_59064531_59073794_59073910_59074253
ENSMUSG00000031138.5_59073796_59074635_1	chrX	+	496	2	ISM	ENSMUSG00000031138.5	ENST00000394090.2	1302	7	28972	166	28972	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGAGATAGTGGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	59073795	59074635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_59073910_59074253
ENSMUSG00000031138.5_59073845_59074687_1	chrX	+	499	2	ISM	ENSMUSG00000031138.5	ENST00000394090.2	1302	7	29021	114	29021	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTGGCATTATTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	59073844	59074687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_59073910_59074253
ENSMUSG00000031138.5_59073888_59074746_1	chrX	+	515	2	ISM	ENSMUSG00000031138.5	ENST00000394090.2	1302	7	29064	55	29064	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAAGGTTTCCCGGTACG	NA	NA	NA	NA	NA	NA	NA	NA	59073887	59074746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_59073910_59074253
ENSMUSG00000031143.5_7460049_7470576_1	chrX	-	2078	16	ISM	ENSMUSG00000031143.5	ENSMUST00000033483.5	2353	17	1180	1	1180	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACGCTTAGGCATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	7470576	7460048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398
ENSMUSG00000031143.5_7460175_7471620_1	chrX	-	2090	17	FSM	ENSMUSG00000031143.5	ENSMUST00000033483.5	2353	17	136	127	136	-127	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGCTGTCTGCTTATA	NA	NA	NA	NA	NA	NA	NA	NA	7471620	7460174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471482
ENSMUSG00000031143.5_7460238_7471620_1	chrX	-	2027	17	FSM	ENSMUSG00000031143.5	ENSMUST00000033483.5	2353	17	136	190	136	-190	multi-exon	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGGCACCTGTTCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	7471620	7460237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471482
ENSMUSG00000031143.5_7460285_7471651_1	chrX	-	2011	17	FSM	ENSMUSG00000031143.5	ENSMUST00000033483.5	2353	17	105	237	105	-237	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGTCTCCTAACCACAG	NA	NA	NA	NA	NA	NA	NA	NA	7471651	7460284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471482
ENSMUSG00000031146.7_7534464_7535679_1	chrX	-	399	3	ISM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	1950	284	1950	-284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTAGGCAAGTATTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	7535679	7534463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7534746_7535165_7535257_7535653
ENSMUSG00000031146.7_7534620_7535869_1	chrX	-	341	4	ISM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	1760	440	1760	-440	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCAGGTGGATCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	7535869	7534619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841
ENSMUSG00000031146.7_7534668_7535923_1	chrX	-	347	4	ISM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	1706	488	1706	-488	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGGGCGGTGGTGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	7535923	7534667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841
ENSMUSG00000031146.7_7534680_7535932_1	chrX	-	344	4	ISM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	1697	500	1697	-500	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTTCCTCCTGTCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	7535932	7534679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841
ENSMUSG00000031146.7_7534721_7535971_1	chrX	-	342	4	ISM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	1658	541	1658	-541	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCTGTCTCTGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	7535971	7534720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841
ENSMUSG00000031146.7_7535220_7537447_1	chrX	-	355	4	ISM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	182	1040	182	-1040	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATACATCACCTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	7537447	7535219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7535257_7535653_7535750_7535841_7535998_7537381
ENSMUSG00000031147.9_7540060_7546249_1	chrX	-	2047	5	FSM	ENSMUSG00000031147.9	ENST00000616266.4	2048	5	1	0	1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCATAAGGAGGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	7546249	7540059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_7541446_7542071_7542249_7542338_7542608_7543337_7543442_7546138
ENSMUSG00000031147.9_7540060_7546249_2	chrX	-	2044	5	NNC	ENSMUSG00000031147.9	novel	2048	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCATAAGGAGGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	7546249	7540059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_7541446_7542071_7542249_7542338_7542608_7543337_7543435_7546134
ENSMUSG00000031148.15_7563574_7569769_1	chrX	+	618	5	ISM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	204	6732	204	-6732	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAAGAGCTGTGGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	7563573	7569769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608
ENSMUSG00000031148.15_7564799_7571593_1	chrX	+	598	5	ISM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	1429	4908	1429	-4908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCATTGTGACTGTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	7564798	7571593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538
ENSMUSG00000031148.15_7572929_7574774_1	chrX	+	583	3	ISM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	9559	1727	9559	-1727	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGAACATGAAATCTATG	NA	NA	NA	NA	NA	NA	NA	NA	7572928	7574774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_7573001_7574174_7574261_7574349
ENSMUSG00000031148.15_7574198_7574902_1	chrX	+	616	2	ISM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	10828	1599	10828	-1599	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTATTTTGTTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	7574197	7574902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_7574261_7574349
ENSMUSG00000031149.8_7594678_7597303_1	chrX	+	1334	3	NNC	ENSMUSG00000031149.8	novel	1339	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1637	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCTCCTGTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	7594677	7597303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_7595002_7595954_7596168_7596506
ENSMUSG00000031150.14_7599743_7604627_1	chrX	-	1611	9	FSM	ENSMUSG00000031150.14	ENST00000496529.6	2131	9	132	388	132	-388	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCCCAGAAGCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	7604627	7599742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604600
ENSMUSG00000031150.14_7599795_7604683_1	chrX	-	1615	9	FSM	ENSMUSG00000031150.14	ENST00000496529.6	2131	9	76	440	76	-440	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCGCAGCAAGGACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	7604683	7599794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604600
ENSMUSG00000031150.14_7599850_7604732_1	chrX	-	1609	9	FSM	ENSMUSG00000031150.14	ENST00000496529.6	2131	9	27	495	27	-495	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCATGCTCCCAGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	7604732	7599849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604600
ENSMUSG00000031153.17_7661245_7684613_1	chrX	+	1946	19	ISM	ENSMUSG00000031153.17	ENSMUST00000065932.14	3156	25	5241	2193	4998	-2189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAGCCGGATTGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	7661244	7684613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534
ENSMUSG00000031153.17_7665557_7685542_1	chrX	+	1976	19	ISM	ENSMUSG00000031153.17	ENSMUST00000065932.14	3156	25	9553	1264	9310	-1260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGCACTTGCACAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	7665556	7685542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405
ENSMUSG00000031153.17_7669559_7686806_1	chrX	+	2039	14	ISM	ENSMUSG00000031153.17	ENSMUST00000065932.14	3156	25	13555	0	13312	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGTCTCATTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	7669558	7686806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ENSMUSG00000031156.19_7750572_7756028_1	chrX	+	498	3	NNC	ENSMUSG00000031156.19	novel	500	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATCCTAGCAGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	7750571	7756028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_7750711_7751987_7752171_7755852
ENSMUSG00000031156.19_7750572_7756028_2	chrX	+	500	3	FSM	ENSMUSG00000031156.19	ENST00000635015.1	500	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATCCTAGCAGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	7750571	7756028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_7750711_7751987_7752171_7755850
ENSMUSG00000031156.19_7750586_7758646_1	chrX	+	728	4	FSM	ENSMUSG00000031156.19	ENST00000616181.5	1498	4	14	756	14	183	multi-exon	FALSE	canonical	NA	NA	NA	NA	2727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTCGTAACCTACAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	7750585	7758646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_7750711_7751987_7752171_7755850_7756003_7758378
ENSMUSG00000031156.19_7750617_7752058_1	chrX	+	222	2	ISM	ENSMUSG00000031156.19	ENST00000452555.7	1535	4	45	7324	45	-3970	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTACGCTCGCACACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	7750616	7752058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_7750673_7751892
ENSMUSG00000031156.19_7750617_7758697_1	chrX	+	748	4	FSM	ENSMUSG00000031156.19	ENST00000616181.5	1498	4	45	705	45	234	multi-exon	FALSE	canonical	NA	NA	NA	NA	2135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGCTGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	7750616	7758697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_7750711_7751987_7752171_7755850_7756003_7758378
ENSMUSG00000031157.11_7760950_7765438_1	chrX	-	922	7	FSM	ENSMUSG00000031157.11	ENST00000651767.1	1219	7	297	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCCCTTGTTCCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	7765438	7760949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765327
ENSMUSG00000031157.11_7760950_7765438_2	chrX	-	916	7	NNC	ENSMUSG00000031157.11	novel	1219	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCCCTTGTTCCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	7765438	7760949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762646_7764789_7764876_7765327
ENSMUSG00000031157.11_7761422_7765608_1	chrX	-	917	6	ISM	ENSMUSG00000031157.11	ENST00000651767.1	1219	7	127	472	-100	-472	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTCAGATGCACCCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	7765608	7761421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765327
ENSMUSG00000031157.11_7761454_7765688_1	chrX	-	965	6	ISM	ENSMUSG00000031157.11	ENST00000651767.1	1219	7	47	504	47	-504	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAAGAATTAGACCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	7765688	7761453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765327
ENSMUSG00000031158.12_7765596_7774292_1	chrX	+	2083	6	FSM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	0	298	0	-298	multi-exon	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTCATTTTATCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	7765595	7774292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
ENSMUSG00000031158.12_7767199_7774443_1	chrX	+	2122	5	ISM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	1603	147	1603	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACATGTGTAAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	7767198	7774443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
ENSMUSG00000031158.12_7772353_7774590_1	chrX	+	2061	3	ISM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	6757	0	6757	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGCTGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	7772352	7774590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_7772439_7772519_7772631_7772726
ENSMUSG00000031158.12_7772520_7774590_1	chrX	+	1973	2	NNC	ENSMUSG00000031158.12	novel	2381	6	NA	NA	6924	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGCTGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	7772519	7774590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_7772631_7772728
ENSMUSG00000031161.16_7796359_7803314_1	chrX	-	2011	10	ISM	ENSMUSG00000031161.16	ENST00000334136.11	3664	27	9929	-22	9929	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGCTTTTTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	7803314	7796358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180
ENSMUSG00000031161.16_7796694_7803905_1	chrX	-	1885	12	ISM	ENSMUSG00000031161.16	ENST00000643934.1	3617	27	9338	266	9338	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTTTCCCTTCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	7803905	7796693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865
ENSMUSG00000031161.16_7797246_7804250_1	chrX	-	1933	11	ISM	ENSMUSG00000031161.16	ENST00000643934.1	3617	27	8993	818	8993	-818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAACAGAAGAGGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	7804250	7797245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081
ENSMUSG00000031161.16_7797940_7806203_1	chrX	-	1885	15	ISM	ENSMUSG00000031161.16	ENSMUST00000033501.15	4142	29	7925	1579	7040	-1512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAAGGAGACTGTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	7806203	7797939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156
ENSMUSG00000031161.16_7797987_7806252_1	chrX	-	1887	15	ISM	ENSMUSG00000031161.16	ENSMUST00000033501.15	4142	29	7876	1626	6991	-1559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCCTCAGAACAAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	7806252	7797986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156
ENSMUSG00000031161.16_7798089_7808151_1	chrX	-	1885	16	ISM	ENSMUSG00000031161.16	ENSMUST00000033501.15	4142	29	5977	1728	5092	-1661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGAAGAAAGCGTGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	7808151	7798088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082
ENSMUSG00000031161.16_7800410_7809976_1	chrX	-	1901	17	ISM	ENSMUSG00000031161.16	ENSMUST00000033501.15	4142	29	4152	4049	3267	-3982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCTTTTGATGTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	7809976	7800409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879
ENSMUSG00000031161.16_7808304_7811019_1	chrX	-	376	5	ISM	ENSMUSG00000031161.16	ENST00000643934.1	3617	27	2224	11876	2224	-11876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCTATGCGCAAAAGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	7811019	7808303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952
ENSMUSG00000031166.14_7989738_7994319_1	chrX	-	2539	4	ISM	ENSMUSG00000031166.14	ENSMUST00000130832.8	4374	9	4690	175	4690	-175	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGGTTTCAGGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	7994319	7989737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272
ENSMUSG00000031166.14_7990012_7995394_1	chrX	-	2586	5	ISM	ENSMUSG00000031166.14	ENSMUST00000130832.8	4374	9	3615	449	3615	-449	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGTGTGCCAACATC	NA	NA	NA	NA	NA	NA	NA	NA	7995394	7990011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207
ENSMUSG00000031166.14_7990334_7996594_1	chrX	-	2616	7	ISM	ENSMUSG00000031166.14	ENSMUST00000130832.8	4374	9	2415	771	2415	-771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCTTGGTAATTAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	7996594	7990333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494
ENSMUSG00000031166.14_7990470_7997673_1	chrX	-	2540	8	ISM	ENSMUSG00000031166.14	ENSMUST00000130832.8	4374	9	1336	907	1336	-907	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAACAGAAAATCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	7997673	7990469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623
ENSMUSG00000031167.17_8008598_8011236_1	chrX	-	1024	6	ISM	ENSMUSG00000031167.17	ENSMUST00000115615.9	1183	7	726	-2	682	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATAATGCTTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	8011236	8008597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193
ENSMUSG00000031167.17_8008711_8009990_1	chrX	-	657	3	ISM	ENSMUSG00000031167.17	ENSMUST00000115621.9	1338	7	2129	113	1928	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGTGAATGTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	8009990	8008710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_8009195_8009489_8009569_8009896
ENSMUSG00000031167.17_8008711_8011935_1	chrX	-	1045	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115615.9	1183	7	27	111	0	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	5094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGTGAATGTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	8011935	8008710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUSG00000031167.17_8009129_8011998_1	chrX	-	690	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115615.9	1183	7	-36	529	14	-522	multi-exon	FALSE	canonical	NA	NA	NA	NA	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCTGCGCTGAAACGTC	NA	NA	NA	NA	NA	NA	NA	NA	8011998	8009128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUSG00000031167.17_8009490_8012119_1	chrX	-	744	6	ISM	ENSMUSG00000031167.17	ENSMUST00000115616.8	1225	7	-107	883	0	-883	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTGAGACCTGAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	8012119	8009489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUSG00000031168.15_8051570_8059751_4	chrX	-	1739	5	NNC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGAGATATTTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	8059751	8051569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_8052073_8052882_8053014_8053121_8053153_8056313_8056676_8059039
ENSMUSG00000031168.15_8051570_8059751_5	chrX	-	1736	5	NNC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGAGATATTTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	8059751	8051569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_8052068_8052882_8053014_8053121_8053159_8056317_8056676_8059039
ENSMUSG00000031171.12_8105015_8111614_1	chrX	-	2189	3	ISM	ENSMUSG00000031171.12	ENSMUST00000033513.10	3425	13	7031	108	3684	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGAGGGATGGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	8111614	8105014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_8107070_8111298_8111341_8111522
ENSMUSG00000031171.12_8105372_8112873_1	chrX	-	2220	6	ISM	ENSMUSG00000031171.12	ENSMUST00000033513.10	3425	13	5772	465	2425	-465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTCTGTGATGCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	8112873	8105371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111895_8112574_8112659_8112770
ENSMUSG00000031171.12_8106009_8118549_1	chrX	-	2227	13	FSM	ENSMUSG00000031171.12	ENSMUST00000033513.10	3425	13	96	1102	0	650	multi-exon	FALSE	canonical	NA	NA	NA	NA	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGATTTCCAAAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	8118549	8106008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111895_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ENSMUSG00000031171.12_8106063_8118602_1	chrX	-	2226	13	FSM	ENSMUSG00000031171.12	ENSMUST00000033513.10	3425	13	43	1156	32	596	multi-exon	FALSE	canonical	NA	NA	NA	NA	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAACAAAACAAAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	8118602	8106062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111895_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ENSMUSG00000031171.12_8106659_8112787_1	chrX	-	841	6	ISM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	5847	0	2511	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCACGTTGCTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	8112787	8106658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770
ENSMUSG00000031171.12_8106782_8112847_1	chrX	-	778	6	ISM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	5787	123	2451	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACGTCAGCAACCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	8112847	8106781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770
ENSMUSG00000031171.12_8107019_8116667_1	chrX	-	786	10	ISM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	1967	360	-1369	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAACTAGAAGCTGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	8116667	8107018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634
ENSMUSG00000031171.12_8111300_8115273_1	chrX	-	631	7	FSM	ENSMUSG00000031171.12	ENST00000396894.8	655	7	25	-1	25	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAATTTGCTTTTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	8115273	8111299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_8111341_8111522_8111712_8111790_8111895_8112574_8112659_8112770_8112874_8112965_8113020_8115217
ENSMUSG00000031171.12_8111580_8117167_1	chrX	-	813	10	ISM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	1467	4921	1382	-279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGTGGACAAGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	8117167	8111579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118
ENSMUSG00000031171.12_8111657_8117198_1	chrX	-	767	10	ISM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	1436	4998	1351	-356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCATACCAAGAGGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	8117198	8111656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118
ENSMUSG00000031171.12_8112575_8118549_1	chrX	-	831	9	ISM	ENSMUSG00000031171.12	ENSMUST00000115594.8	1529	13	0	5916	0	-1274	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGCCAGAGCTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	8118549	8112574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ENSMUSG00000031176.9_9521707_9522631_1	chrX	-	609	2	ISM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	6611	1201	4631	911	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTTTTCTTTTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	9522631	9521706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_9522303_9522618
ENSMUSG00000031176.9_9521821_9523326_1	chrX	-	607	3	ISM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	5916	1315	3936	797	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAAATGACATGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	9523326	9521820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_9522303_9522618_9522697_9523279
ENSMUSG00000031176.9_9521976_9529133_1	chrX	-	597	5	FSM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	109	1470	109	642	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTGACCTAAACTTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	9529133	9521975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_9522303_9522618_9522697_9523279_9523404_9527218_9527261_9529107
ENSMUSG00000031176.9_9522033_9529242_1	chrX	-	649	5	FSM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	0	1527	0	585	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATACAGCATCATTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	9529242	9522032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_9522303_9522618_9522697_9523279_9523404_9527218_9527261_9529107
ENSMUSG00000031176.9_9522080_9529242_1	chrX	-	602	5	FSM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	0	1574	0	538	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTAAGCAGAAGTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	9529242	9522079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_9522303_9522618_9522697_9523279_9523404_9527218_9527261_9529107
ENSMUSG00000031189.13_68404306_68828812_3	chrX	+	1474	8	NNC	ENSMUSG00000031189.13	novel	1450	8	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATTTTTAAAGACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	68404305	68828812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_68404445_68567041_68567163_68588014_68588876_68737554_68737595_68768647_68768685_68769018_68769053_68810787_68810885_68828667
ENSMUSG00000031189.13_68404306_68828812_4	chrX	+	1474	8	NNC	ENSMUSG00000031189.13	novel	1450	8	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATTTTTAAAGACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	68404305	68828812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_68404445_68567041_68567163_68588014_68588871_68737549_68737595_68768647_68768685_68769018_68769053_68810787_68810885_68828667
ENSMUSG00000031189.13_68878537_68892716_1	chrX	+	678	4	ISM	ENSMUSG00000031189.13	ENST00000286437.7	7430	17	140989	23353	140989	-18927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAGATGACATCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	68878536	68892716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_68878658_68884081_68884204_68887526_68887747_68892501
ENSMUSG00000031197.12_74557905_74578261_1	chrX	+	1308	6	FSM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	0	287	0	-287	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTATGTAACAGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	74557904	74578261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
ENSMUSG00000031197.12_74557923_74578312_1	chrX	+	1341	6	FSM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	18	236	18	-236	multi-exon	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATCTGCATTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	74557922	74578312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
ENSMUSG00000031197.12_74557923_74578362_1	chrX	+	1391	6	FSM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	18	186	18	-186	multi-exon	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTACATAGGACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	74557922	74578362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
ENSMUSG00000031197.12_74560768_74578548_1	chrX	+	1392	5	ISM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	2863	0	2863	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGACAATTTTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	74560767	74578548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
ENSMUSG00000031197.12_74564967_74578548_1	chrX	+	1342	4	ISM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	7062	0	7062	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGACAATTTTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	74564966	74578548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_74565036_74566865_74566965_74574690_74574830_74577513
ENSMUSG00000031198.5_74430708_74439639_1	chrX	+	2083	4	ISM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	4703	426	4703	-426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAATTAATAATGGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	74430707	74439639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_74430859_74434389_74434466_74435245_74435378_74437915
ENSMUSG00000031201.18_74479071_74494830_1	chrX	+	1127	7	ISM	ENSMUSG00000031201.18	ENSMUST00000033544.14	4310	11	18837	2777	18755	-484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGTTTTAACATTGT	NA	NA	NA	NA	NA	NA	NA	NA	74479070	74494830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ENSMUSG00000031201.18_74490762_74495038_1	chrX	+	1102	4	ISM	ENSMUSG00000031201.18	ENSMUST00000033544.14	4310	11	30528	2569	30446	-276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAATGTAAAAATACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	74490761	74495038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_74490894_74491408_74491453_74493574_74493752_74494289
ENSMUSG00000031201.18_74493640_74495314_1	chrX	+	1137	2	ISM	ENSMUSG00000031201.18	ENSMUST00000118428.8	2093	10	33337	277	33324	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAAAAAGGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	74493639	74495314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_74493752_74494289
ENSMUSG00000031201.18_74493680_74495320_1	chrX	+	1103	2	ISM	ENSMUSG00000031201.18	ENSMUST00000118428.8	2093	10	33377	271	33364	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGTTGTCTTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	74493679	74495320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_74493752_74494289
ENSMUSG00000031207.17_95139648_95211761_1	chrX	+	2688	14	FSM	ENSMUSG00000031207.17	ENST00000360270.7	3086	14	0	398	0	-397	multi-exon	FALSE	canonical	NA	NA	NA	NA	2799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTAGTATTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95139647	95211761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075_95210572_95211328
ENSMUSG00000031207.17_95185470_95211910_1	chrX	+	2636	13	ISM	ENSMUSG00000031207.17	ENST00000360270.7	3086	14	45822	249	45822	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGCTGTGAATTATATT	NA	NA	NA	NA	NA	NA	NA	NA	95185469	95211910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075_95210572_95211328
ENSMUSG00000031207.17_95196128_95212159_1	chrX	+	2706	11	ISM	ENSMUSG00000031207.17	ENST00000360270.7	3086	14	56480	0	56480	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGACTCAGTCTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	95196127	95212159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075_95210572_95211328
ENSMUSG00000031207.17_95196279_95212159_1	chrX	+	2555	11	ISM	ENSMUSG00000031207.17	ENST00000360270.7	3086	14	56631	0	56631	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGACTCAGTCTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	95196278	95212159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075_95210572_95211328
ENSMUSG00000031214.14_97601396_97608396_1	chrX	-	784	4	ISM	ENSMUSG00000031214.14	ENST00000679748.1	2876	23	325446	166	325446	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTCTCTTTGCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	97608396	97601395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321
ENSMUSG00000031214.14_97601551_97640683_1	chrX	-	770	5	ISM	ENSMUSG00000031214.14	ENST00000679748.1	2876	23	293159	321	293159	306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGGAGAATTGTATCATG	NA	NA	NA	NA	NA	NA	NA	NA	97640683	97601550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97640633
ENSMUSG00000031214.14_97601610_97640739_1	chrX	-	767	5	ISM	ENSMUSG00000031214.14	ENST00000679748.1	2876	23	293103	380	293103	247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGGGTTGGGGACATTG	NA	NA	NA	NA	NA	NA	NA	NA	97640739	97601609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97640633
ENSMUSG00000031214.14_97601678_97640783_1	chrX	-	743	5	ISM	ENSMUSG00000031214.14	ENST00000679748.1	2876	23	293059	448	293059	179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGCAAACGTCATTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	97640783	97601677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97640633
ENSMUSG00000031214.14_97601863_97685399_1	chrX	-	865	8	ISM	ENSMUSG00000031214.14	ENST00000679748.1	2876	23	248443	633	248443	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCACGTGTTTGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	97685399	97601862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97640633_97640782_97670519_97670680_97684513_97684620_97685356
ENSMUSG00000031214.14_97603190_97688601_1	chrX	-	820	8	ISM	ENSMUSG00000031214.14	ENST00000679748.1	2876	23	245241	1960	245241	-1333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTGTTTCCACATTACAA	NA	NA	NA	NA	NA	NA	NA	NA	97688601	97603189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_97603234_97607235_97607287_97608321_97608488_97640633_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515
ENSMUSG00000031214.14_97608405_97741944_1	chrX	-	768	8	ISM	ENSMUSG00000031214.14	ENST00000679748.1	2876	23	191898	7175	191898	-6548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCGGTCCATCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	97741944	97608404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_97608488_97640633_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892
ENSMUSG00000031214.14_97640633_97745549_1	chrX	-	810	9	ISM	ENSMUSG00000031214.14	ENSMUST00000113826.8	2794	26	188838	38776	188293	-38776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGTTAGCTTCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	97745549	97640632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470
ENSMUSG00000031214.14_97640738_97748696_1	chrX	-	766	10	ISM	ENSMUSG00000031214.14	ENSMUST00000113826.8	2794	26	185691	38881	185146	-38881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACCTCGAGTGACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	97748696	97640737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635
ENSMUSG00000031214.14_97670520_97753784_1	chrX	-	854	10	ISM	ENSMUSG00000031214.14	ENSMUST00000113826.8	2794	26	180603	68663	180058	-68663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCATTCCCTATCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	97753784	97670519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97753683
ENSMUSG00000031214.14_97684514_97756076_1	chrX	-	824	10	ISM	ENSMUSG00000031214.14	ENSMUST00000113826.8	2794	26	178311	82657	177766	-82657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTAGCTGCTGGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	97756076	97684513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97753683_97753785_97755946
ENSMUSG00000031214.14_97685363_97757775_1	chrX	-	775	10	ISM	ENSMUSG00000031214.14	ENSMUST00000113826.8	2794	26	176612	83506	176067	-83506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCAGTAAGTATTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	97757775	97685362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97753683_97753785_97755946_97756077_97757712
ENSMUSG00000031214.14_97739605_97769727_1	chrX	-	796	9	ISM	ENSMUSG00000031214.14	ENSMUST00000113826.8	2794	26	164660	137748	164115	-137748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAAATTTACATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	97769727	97739604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97753683_97753785_97755946_97756077_97757712_97757818_97769610
ENSMUSG00000031214.14_97745471_97807382_1	chrX	-	792	8	ISM	ENSMUSG00000031214.14	ENSMUST00000113826.8	2794	26	127005	143614	126460	-143614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTATCTCAGACACTG	NA	NA	NA	NA	NA	NA	NA	NA	97807382	97745470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_97745550_97748635_97748728_97753683_97753785_97755946_97756077_97757712_97757818_97769610_97769722_97775970_97776073_97807310
ENSMUSG00000031214.14_97748636_97846786_1	chrX	-	871	9	ISM	ENSMUSG00000031214.14	ENSMUST00000113826.8	2794	26	87601	146779	87056	-146779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGGCATGCTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	97846786	97748635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_97748728_97753683_97753785_97755946_97756077_97757712_97757818_97769610_97769722_97775970_97776073_97807310_97807383_97824561_97824624_97846690
ENSMUSG00000031214.14_97753737_97933735_1	chrX	-	774	9	ISM	ENSMUSG00000031214.14	ENSMUST00000113826.8	2794	26	652	151880	107	-151880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCAGGATGCTCACAATG	NA	NA	NA	NA	NA	NA	NA	NA	97933735	97753736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_97753785_97755946_97756077_97757712_97757818_97769610_97769722_97775970_97776073_97807310_97807383_97824561_97824624_97846690_97846787_97933687
ENSMUSG00000031217.9_98179736_98191877_1	chrX	+	2538	5	FSM	ENSMUSG00000031217.9	ENSMUST00000052839.7	3258	5	0	720	0	-720	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCTCCTTCACTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	98179735	98191877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_98180620_98188897_98189176_98190083_98190177_98190357_98190484_98190720
ENSMUSG00000031217.9_98180370_98192454_1	chrX	+	2481	5	FSM	ENSMUSG00000031217.9	ENSMUST00000052839.7	3258	5	634	143	634	-143	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTCGGAAGGGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	98180369	98192454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_98180620_98188897_98189176_98190083_98190177_98190357_98190484_98190720
ENSMUSG00000031217.9_98180542_98192597_1	chrX	+	2452	5	FSM	ENSMUSG00000031217.9	ENSMUST00000052839.7	3258	5	806	0	806	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	98180541	98192597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_98180620_98188897_98189176_98190083_98190177_98190357_98190484_98190720
ENSMUSG00000031226.14_104123381_104126911_1	chrX	+	738	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	19	1881	14	-1881	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCAAGTGGAGGACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	104123380	104126911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
ENSMUSG00000031226.14_104125621_104127214_1	chrX	+	769	3	ISM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	2259	1578	2254	-1578	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTCTCTTAACCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	104125620	104127214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_104125685_104126299_104126412_104126621
ENSMUSG00000031226.14_104125650_104160201_1	chrX	+	429	3	ISM	ENSMUSG00000031226.14	ENSMUST00000119477.2	1239	6	2283	495	2283	-495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGTACTAATTAACAATT	NA	NA	NA	NA	NA	NA	NA	NA	104125649	104160201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_104125685_104126299_104126412_104159919
ENSMUSG00000031229.17_104842403_104845656_1	chrX	-	1859	3	ISM	ENSMUSG00000031229.17	ENST00000675732.1	5310	18	43961	1186	43961	-1182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGAAATCATGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	104845656	104842402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_104844063_104844953_104845083_104845586
ENSMUSG00000031229.17_104842835_104861746_1	chrX	-	1838	6	ISM	ENSMUSG00000031229.17	ENST00000675732.1	5310	18	27871	1618	27871	-1614	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAAGTTCATATGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	104861746	104842834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637
ENSMUSG00000031229.17_104843547_104874533_1	chrX	-	1840	11	ISM	ENSMUSG00000031229.17	ENST00000675732.1	5310	18	15084	2330	15084	-2326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTTTTCAGTGAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	104874533	104843546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453
ENSMUSG00000031229.17_104843610_104874601_1	chrX	-	1845	11	ISM	ENSMUSG00000031229.17	ENST00000675732.1	5310	18	15016	2393	15016	-2389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTCAGTGAAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	104874601	104843609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453
ENSMUSG00000031229.17_104844023_104880014_1	chrX	-	1767	14	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	92995	2802	9603	-2802	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGCAGCAGTACACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	104880014	104844022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915
ENSMUSG00000031229.17_104844979_104881967_1	chrX	-	1844	14	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	91042	3758	7650	-3758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATGTATTGACAAAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	104881967	104844978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844
ENSMUSG00000031229.17_104847389_104889280_1	chrX	-	1888	13	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	83729	6168	337	-6168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTTTCCAACTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	104889280	104847388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102
ENSMUSG00000031229.17_104861702_104876184_1	chrX	-	1073	8	ISM	ENSMUSG00000031229.17	ENST00000675732.1	5310	18	13433	20485	13433	-20481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTACTAGATGACCCGA	NA	NA	NA	NA	NA	NA	NA	NA	104876184	104861701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874791_104874881_104876052
ENSMUSG00000031229.17_104863079_104894675_1	chrX	-	1844	15	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	78334	21858	-5058	-21858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTAGCTGCTAATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	104894675	104863078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642
ENSMUSG00000031229.17_104874548_104889531_1	chrX	-	1040	8	ISM	ENSMUSG00000031229.17	ENST00000675732.1	5310	18	86	33331	86	-33327	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTCTGGAATTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	104889531	104874547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_104874627_104874791_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400
ENSMUSG00000031229.17_104894721_104919248_1	chrX	-	1844	7	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	53761	53500	-29631	30840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAATGCCCTTAAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	104919248	104894720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165
ENSMUSG00000031229.17_104900209_104919867_1	chrX	-	1791	3	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	53142	58988	-30250	25352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTAGAAGAAATTAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	104919867	104900208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_104900225_104911456_104911530_104918165
ENSMUSG00000031229.17_104919725_104931429_1	chrX	-	1853	5	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	40754	5836	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGCTAAGCAACCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	104931429	104919724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320
ENSMUSG00000031229.17_104919946_104943565_1	chrX	-	1839	8	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	29444	78725	28618	5615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCACAATACTTTTAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	104943565	104919945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486
ENSMUSG00000031232.18_105011690_105027348_1	chrX	-	3595	4	ISM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	28157	0	28038	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGGTTTTTTTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	105027348	105011689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315
ENSMUSG00000031232.18_105011806_105028033_1	chrX	-	3572	5	ISM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	27472	116	27353	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATATAATTCATTATGT	NA	NA	NA	NA	NA	NA	NA	NA	105028033	105011805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971
ENSMUSG00000031232.18_105011907_105032645_1	chrX	-	3568	6	ISM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	22860	217	22741	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTCTCATTTAAAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	105032645	105011906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576
ENSMUSG00000031232.18_105011972_105032705_1	chrX	-	3563	6	ISM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	22800	282	22681	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTTTAAGAGCAACATTC	NA	NA	NA	NA	NA	NA	NA	NA	105032705	105011971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576
ENSMUSG00000031232.18_105012318_105040506_1	chrX	-	3567	9	ISM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	14999	628	14880	-628	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATACTGTGACTATTC	NA	NA	NA	NA	NA	NA	NA	NA	105040506	105012317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427
ENSMUSG00000031232.18_105012597_105055505_1	chrX	-	3617	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	0	907	0	-907	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAGGAATGTAACTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	105055505	105012596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ENSMUSG00000031232.18_105012653_105055507_1	chrX	-	3563	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	-2	963	-2	-963	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAGTGCTAGAGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	105055507	105012652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ENSMUSG00000031241.18_106720470_106729189_1	chrX	+	1669	8	NNC	ENSMUSG00000031241.18	novel	1691	8	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTTAACAAATGTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	106720469	106729189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_106720644_106721211_106721384_106722157_106722260_106723713_106723889_106724746_106724912_106725241_106725307_106725720_106725807_106728459
ENSMUSG00000031241.18_106720470_106729189_2	chrX	+	1665	8	NNC	ENSMUSG00000031241.18	novel	1691	8	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTTAACAAATGTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	106720469	106729189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_106720644_106721211_106721384_106722157_106722260_106723713_106723889_106724746_106724912_106725241_106725307_106725731_106725807_106728452
ENSMUSG00000031241.18_106720470_106729189_3	chrX	+	1676	8	ISM	ENSMUSG00000031241.18	ENSMUST00000118986.8	3035	9	352	1314	12	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTTAACAAATGTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	106720469	106729189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_106720644_106721211_106721384_106722157_106722260_106723713_106723889_106724746_106724912_106725241_106725307_106725720_106725807_106728452
ENSMUSG00000031245.9_108048140_108054492_1	chrX	-	1757	4	ISM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	2518	0	2518	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTTTGCAATATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	108054492	108048139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_108049678_108051767_108051903_108054159_108054214_108054462
ENSMUSG00000031245.9_108048303_108057010_1	chrX	-	1771	6	FSM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	0	163	0	-163	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACATTACCAAATACAACT	NA	NA	NA	NA	NA	NA	NA	NA	108057010	108048302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_108049678_108051767_108051903_108054159_108054214_108054462_108054493_108055027_108055052_108056857
ENSMUSG00000031245.9_108048364_108057010_1	chrX	-	1710	6	FSM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	0	224	0	-224	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTAGGTTGCTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	108057010	108048363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_108049678_108051767_108051903_108054159_108054214_108054462_108054493_108055027_108055052_108056857
ENSMUSG00000031246.15_108138971_108204467_1	chrX	+	1272	4	FSM	ENSMUSG00000031246.15	ENSMUST00000033598.9	2882	4	0	1610	0	-1610	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGCAGTTATAGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	108138970	108204467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_108139244_108193520_108193707_108197911_108197993_108203735
ENSMUSG00000031246.15_108139115_108204544_1	chrX	+	1205	4	FSM	ENSMUSG00000031246.15	ENSMUST00000033598.9	2882	4	144	1533	144	-1533	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTCACTTTAAATTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	108139114	108204544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_108139244_108193520_108193707_108197911_108197993_108203735
ENSMUSG00000031246.15_108193566_108204769_1	chrX	+	1256	3	ISM	ENSMUSG00000031246.15	ENSMUST00000033598.9	2882	4	54595	1308	54595	-1308	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCCAAGTAGAAAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	108193565	108204769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_108193707_108197911_108197993_108203735
ENSMUSG00000031246.15_108197939_108204928_1	chrX	+	1247	2	ISM	ENSMUSG00000031246.15	ENSMUST00000033598.9	2882	4	58968	1149	58968	-1149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATAAAGAAACACACATCT	NA	NA	NA	NA	NA	NA	NA	NA	108197938	108204928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_108197993_108203735
ENSMUSG00000031253.16_132809197_132824432_1	chrX	+	733	5	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	22	8131	0	-8131	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACTCACCAAGGGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	132809196	132824432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_132809528_132809701_132809754_132811265_132811481_132816056_132816144_132824384
ENSMUSG00000031253.16_132809319_132824492_1	chrX	+	671	5	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	144	8071	122	-8071	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACCGGGGCTTTCGATTG	NA	NA	NA	NA	NA	NA	NA	NA	132809318	132824492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_132809528_132809701_132809754_132811265_132811481_132816056_132816144_132824384
ENSMUSG00000031253.16_132809464_132826603_1	chrX	+	658	6	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	289	5960	267	-5960	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCAATGGAATGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	132809463	132826603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_132809528_132809701_132809754_132811265_132811481_132816056_132816144_132824384_132824577_132826555
ENSMUSG00000031253.16_132809699_132826732_1	chrX	+	726	5	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	524	5831	502	-5831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGCTGGTAGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	132809698	132826732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_132809754_132811265_132811481_132816056_132816144_132824384_132824577_132826555
ENSMUSG00000031253.16_132811296_132827009_1	chrX	+	665	5	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	2121	5554	2099	-5554	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTCACTCTCGTGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	132811295	132827009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_132811481_132816056_132816144_132824384_132824577_132826555_132826733_132826985
ENSMUSG00000031253.16_132811354_132827055_1	chrX	+	653	5	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	2179	5508	2157	-5508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAGTATACTGGGACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	132811353	132827055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_132811481_132816056_132816144_132824384_132824577_132826555_132826733_132826985
ENSMUSG00000031253.16_132811457_132827862_1	chrX	+	648	6	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	2282	4701	2260	-4701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGAACATGTGATTCGT	NA	NA	NA	NA	NA	NA	NA	NA	132811456	132827862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_132811481_132816056_132816144_132824384_132824577_132826555_132826733_132826985_132827113_132827821
ENSMUSG00000031253.16_132824378_132829393_1	chrX	+	699	5	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	15203	3170	15181	-3170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTGAATACCACTG	NA	NA	NA	NA	NA	NA	NA	NA	132824377	132829393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_132824577_132826555_132826733_132826985_132827113_132827821_132827944_132829319
ENSMUSG00000031253.16_132826556_132829938_1	chrX	+	740	5	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	17381	2625	17359	-2625	internal_fragment	TRUE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGACCTAATGGCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	132826555	132829938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_132826733_132826985_132827113_132827821_132827944_132829319_132829500_132829804
ENSMUSG00000031253.16_132826662_132830976_1	chrX	+	685	6	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	17487	1587	17465	-1587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGCCACCTCAGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	132826661	132830976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_132826733_132826985_132827113_132827821_132827944_132829319_132829500_132829804_132829939_132830925
ENSMUSG00000031253.16_132827057_132832098_1	chrX	+	678	6	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	17882	465	17860	-465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGAACGCTATATGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	132827056	132832098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_132827113_132827821_132827944_132829319_132829500_132829804_132829939_132830925_132831048_132832034
ENSMUSG00000031253.16_132827904_132832214_1	chrX	+	656	5	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	18729	349	18707	-349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGAGTCAGGGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	132827903	132832214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_132827944_132829319_132829500_132829804_132829939_132830925_132831048_132832034
ENSMUSG00000031253.16_132829419_132832339_1	chrX	+	642	4	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	20244	224	20222	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTTGCCAAATCTAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	132829418	132832339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_132829500_132829804_132829939_132830925_132831048_132832034
ENSMUSG00000031253.16_132829892_132832563_1	chrX	+	698	3	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	20717	0	20695	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGTTGTAAATGGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	132829891	132832563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_132829939_132830925_132831048_132832034
ENSMUSG00000031255.15_132838426_132841115_1	chrX	-	418	2	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	21869	1274	21869	-1274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATTTATATATAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	132841115	132838425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132838800_132841071
ENSMUSG00000031255.15_132838476_132841172_1	chrX	-	425	2	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	21812	1324	21812	-1324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTCCTTCTTTTAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	132841172	132838475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132838800_132841071
ENSMUSG00000031255.15_132838544_132841217_1	chrX	-	402	2	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	21767	1392	21767	-1392	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTATGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	132841217	132838543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132838800_132841071
ENSMUSG00000031255.15_132838601_132842005_1	chrX	-	423	3	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	20979	1449	20979	-1449	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAAAGCAACCACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	132842005	132838600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132838800_132841071_132841281_132841990
ENSMUSG00000031255.15_132838740_132844352_1	chrX	-	413	4	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	18632	1588	18632	-1588	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGAAGATGCGACAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	132844352	132838739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132838800_132841071_132841281_132841990_132842091_132844308
ENSMUSG00000031255.15_132841146_132848553_1	chrX	-	412	4	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	14431	3994	14431	-3994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACTGTATGGGACCGGG	NA	NA	NA	NA	NA	NA	NA	NA	132848553	132841145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132841281_132841990_132842091_132844308_132844418_132848485
ENSMUSG00000031255.15_132841193_132848613_1	chrX	-	425	4	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	14371	4041	14371	-4041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTACAATGGTGTGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	132848613	132841192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132841281_132841990_132842091_132844308_132844418_132848485
ENSMUSG00000031255.15_132841236_132849471_1	chrX	-	448	5	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	13513	4084	13513	-4084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGATGAAGAAGACTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	132849471	132841235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132841281_132841990_132842091_132844308_132844418_132848485_132848648_132849439
ENSMUSG00000031255.15_132841991_132849542_1	chrX	-	474	4	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	13442	4839	13442	-4839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCCCTGGGCCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	132849542	132841990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132842091_132844308_132844418_132848485_132848648_132849439
ENSMUSG00000031255.15_132844347_132849870_1	chrX	-	411	4	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	13114	7195	13114	2850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCAAACTCCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	132849870	132844346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132844418_132848485_132848648_132849439_132849543_132849795
ENSMUSG00000031255.15_132844404_132849923_1	chrX	-	407	4	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	13061	7252	13061	2793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCCTGGTTTGCCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	132849923	132844403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132844418_132848485_132848648_132849439_132849543_132849795
ENSMUSG00000031255.15_132848486_132851048_1	chrX	-	472	4	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	11936	11334	11936	-154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCTGCTTTAAAGGTCG	NA	NA	NA	NA	NA	NA	NA	NA	132851048	132848485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132848648_132849439_132849543_132849795_132849975_132851020
ENSMUSG00000031255.15_132848486_132851117_1	chrX	-	2366	2	ISM	ENSMUSG00000031255.15	ENST00000372981.1	3436	10	11867	154	11867	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCTGCTTTAAAGGTCG	NA	NA	NA	NA	NA	NA	NA	NA	132851117	132848485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132848965_132849230
ENSMUSG00000031255.15_132848697_132852569_1	chrX	-	2422	5	ISM	ENSMUSG00000031255.15	ENST00000372981.1	3436	10	10415	365	10415	-365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAATCACTCCTAACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	132852569	132848696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132848965_132849230_132851117_132851859_132851964_132852075_132852154_132852483
ENSMUSG00000031255.15_132848827_132853098_1	chrX	-	2379	6	ISM	ENSMUSG00000031255.15	ENST00000372981.1	3436	10	9886	495	9886	-495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGGAAAAGAAGAGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	132853098	132848826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132848965_132849230_132851117_132851859_132851964_132852075_132852154_132852483_132852574_132853015
ENSMUSG00000031255.15_132849276_132861815_1	chrX	-	2379	7	ISM	ENSMUSG00000031255.15	ENST00000372981.1	3436	10	1169	944	1169	-944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGGTGAATTCCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	132861815	132849275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132851117_132851859_132851964_132852075_132852154_132852483_132852574_132853015_132853118_132861415_132861522_132861757
ENSMUSG00000031255.15_132849420_132862522_1	chrX	-	2378	8	ISM	ENSMUSG00000031255.15	ENST00000372981.1	3436	10	462	1088	462	-1088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGAAGGTTTTGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	132862522	132849419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132851117_132851859_132851964_132852075_132852154_132852483_132852574_132853015_132853118_132861415_132861522_132861757_132861868_132862431
ENSMUSG00000031255.15_132849884_132852525_1	chrX	-	411	5	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	10459	12732	10459	-1552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGCAGAAAACACAGACT	NA	NA	NA	NA	NA	NA	NA	NA	132852525	132849883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132849975_132851020_132851117_132851859_132851964_132852075_132852154_132852483
ENSMUSG00000031255.15_132849946_132852575_1	chrX	-	399	5	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	10409	12794	10409	-1614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCGAAGCTGGTGATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	132852575	132849945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132849975_132851020_132851117_132851859_132851964_132852075_132852154_132852483
ENSMUSG00000031255.15_132851055_132853119_1	chrX	-	438	5	ISM	ENSMUSG00000031255.15	ENST00000372981.1	3436	10	9865	2723	9865	-2723	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAGAGGCAGCATGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	132853119	132851054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132851117_132851859_132851964_132852075_132852154_132852483_132852574_132853015
ENSMUSG00000031255.15_132852524_132862475_1	chrX	-	412	5	ISM	ENSMUSG00000031255.15	ENST00000372981.1	3436	10	509	4192	509	-4192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCTCCCAAATCTCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	132862475	132852523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132852574_132853015_132853118_132861415_132861522_132861757_132861868_132862431
ENSMUSG00000031255.15_132853103_132862647_1	chrX	-	447	4	ISM	ENSMUSG00000031255.15	ENST00000372981.1	3436	10	337	4771	337	-4771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAGACCAGAAGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	132862647	132853102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132853118_132861415_132861522_132861757_132861868_132862431
ENSMUSG00000031256.12_132961793_132975438_1	chrX	+	1157	9	ISM	ENSMUSG00000031256.12	ENSMUST00000113286.8	2717	11	1829	1174	1829	-1174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGGCATGGACACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	132961792	132975438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261
ENSMUSG00000031256.12_132975359_132985704_1	chrX	+	1157	4	ISM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	15423	1091	15395	-1091	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGGTTTTCCACATGG	NA	NA	NA	NA	NA	NA	NA	NA	132975358	132985704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_132975555_132981075_132981187_132981939_132982066_132984980
ENSMUSG00000031262.13_133208904_133218854_1	chrX	+	833	7	ISM	ENSMUSG00000031262.13	ENSMUST00000081064.12	3227	23	71	44534	0	-44111	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTTCATTGCAAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	133208903	133218854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773
ENSMUSG00000031262.13_133211055_133238059_1	chrX	+	848	9	ISM	ENSMUSG00000031262.13	ENSMUST00000101251.8	3085	22	2151	25326	-1683	-24906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCACTAGAACAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	133211054	133238059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958
ENSMUSG00000031262.13_133236857_133243913_1	chrX	+	843	8	ISM	ENSMUSG00000031262.13	ENST00000423383.3	2198	18	24119	19052	24119	-19052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTGTGAGTTAATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	133236856	133243913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824
ENSMUSG00000031262.13_133237264_133247996_1	chrX	+	801	8	ISM	ENSMUSG00000031262.13	ENST00000423383.3	2198	18	24526	14969	24526	-14969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTCTGTGTCTCAATTG	NA	NA	NA	NA	NA	NA	NA	NA	133237263	133247996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973
ENSMUSG00000031262.13_133237333_133248037_1	chrX	+	773	8	ISM	ENSMUSG00000031262.13	ENST00000423383.3	2198	18	24595	14928	24595	-14928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGGTTGCAATGCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	133237332	133248037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973
ENSMUSG00000031262.13_133237958_133250033_1	chrX	+	915	8	ISM	ENSMUSG00000031262.13	ENST00000423383.3	2198	18	25220	12932	25220	-12932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAAGCCCCCATCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	133237957	133250033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908
ENSMUSG00000031262.13_133238412_133252032_1	chrX	+	780	9	ISM	ENSMUSG00000031262.13	ENST00000423383.3	2198	18	25674	10933	25674	-10933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTATAATTACTATTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	133238411	133252032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993
ENSMUSG00000031262.13_133239508_133252159_1	chrX	+	841	8	ISM	ENSMUSG00000031262.13	ENST00000423383.3	2198	18	26770	10806	26770	-10806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTCTACCATCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	133239507	133252159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993
ENSMUSG00000031262.13_133241116_133262746_1	chrX	+	785	7	ISM	ENSMUSG00000031262.13	ENST00000423383.3	2198	18	28378	219	28378	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGAAAATTGGCATAAACA	NA	NA	NA	NA	NA	NA	NA	NA	133241115	133262746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133262631
ENSMUSG00000031262.13_133248004_133262917_1	chrX	+	827	6	ISM	ENSMUSG00000031262.13	ENSMUST00000101251.8	3085	22	39100	468	35266	-48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTCAGATTTTAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	133248003	133262917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ENSMUSG00000031262.13_133248038_133262937_1	chrX	+	771	5	ISM	ENSMUSG00000031262.13	ENST00000423383.3	2198	18	35300	28	35300	-28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAATGAAAAACAACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	133248037	133262937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133262631
ENSMUSG00000031262.13_133252012_133263230_1	chrX	+	842	3	ISM	ENSMUSG00000031262.13	ENSMUST00000101251.8	3085	22	43108	155	39274	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTATGAGGGAAGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	133252011	133263230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_133252213_133261963_133262006_133262631
ENSMUSG00000031266.8_133490621_133494474_1	chrX	-	708	4	ISM	ENSMUSG00000031266.8	ENST00000649178.1	1334	8	7179	0	7179	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAACTACTATATAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	133494474	133490620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382
ENSMUSG00000031266.8_133490725_133495988_1	chrX	-	664	5	ISM	ENSMUSG00000031266.8	ENST00000649178.1	1334	8	5665	104	5665	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGCTTCTCCCCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	133495988	133490724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928
ENSMUSG00000031266.8_133491721_133497049_1	chrX	-	630	5	ISM	ENSMUSG00000031266.8	ENST00000649178.1	1334	8	4604	1100	4604	-1100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCAGGGCTACTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	133497049	133491720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023
ENSMUSG00000031266.8_133491774_133497098_1	chrX	-	626	5	ISM	ENSMUSG00000031266.8	ENST00000649178.1	1334	8	4555	1153	4555	-1153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGCTCTGCTTCAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	133497098	133491773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023
ENSMUSG00000031266.8_133491826_133497149_1	chrX	-	625	5	ISM	ENSMUSG00000031266.8	ENST00000649178.1	1334	8	4504	1205	4504	-1205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGCTCCCCTACTCATG	NA	NA	NA	NA	NA	NA	NA	NA	133497149	133491825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023
ENSMUSG00000031266.8_133492814_133498973_1	chrX	-	715	5	ISM	ENSMUSG00000031266.8	ENST00000649178.1	1334	8	2680	2193	2680	-2193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCCCTGAACCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	133498973	133492813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133498865
ENSMUSG00000031274.17_140366389_140371959_1	chrX	+	290	5	ISM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	107773	99762	107773	-99762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGGTGAAAAGGTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	140366388	140371959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_140366482_140366919_140366974_140367066_140367124_140367562_140367608_140371918
ENSMUSG00000031274.17_140367110_140375050_1	chrX	+	283	5	ISM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	108494	96671	108494	-96671	internal_fragment	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGGTAAAAGACATGATG	NA	NA	NA	NA	NA	NA	NA	NA	140367109	140375050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_140367124_140367562_140367608_140371918_140371973_140373105_140373148_140374922
ENSMUSG00000031274.17_140383212_140395492_1	chrX	+	283	4	ISM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	124596	76229	124596	-76229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAAAGGTGACAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	140383211	140395492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_140383255_140392818_140392912_140394170_140394242_140395416
ENSMUSG00000031274.17_140415656_140422205_1	chrX	+	299	4	ISM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	157040	49516	157040	-49516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAGGAAGTAAAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	140415655	140422205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_140415692_140418849_140418949_140420221_140420312_140422131
ENSMUSG00000031274.17_140422226_140437202_1	chrX	+	279	4	ISM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	163610	34519	163610	-34519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACCTCCTGGTGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	140422225	140437202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_140422272_140427814_140427942_140436366_140436448_140437177
ENSMUSG00000031274.17_140458706_140466594_1	chrX	+	272	2	ISM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	200090	5127	200090	-5127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAACGTTTGTAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	140458705	140466594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_140458921_140466537
ENSMUSG00000031274.17_140469161_140471086_1	chrX	+	275	3	ISM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	210545	635	210545	-635	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCGATGTCAAGTATGCA	NA	NA	NA	NA	NA	NA	NA	NA	140469160	140471086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_140469215_140469561_140469735_140471038
ENSMUSG00000031278.13_141102657_141111085_1	chrX	-	1288	2	ISM	ENSMUSG00000031278.13	ENST00000502391.6	4992	15	62442	1434	62255	-1434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTCATTTTGCTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	141111085	141102656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141103831_141110971
ENSMUSG00000031278.13_141102786_141111944_1	chrX	-	1304	3	ISM	ENSMUSG00000031278.13	ENST00000502391.6	4992	15	61583	1563	61396	-1563	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGACTTGGAATTTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	141111944	141102785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141103831_141110971_141111130_141111843
ENSMUSG00000031278.13_141102911_141115291_1	chrX	-	1297	4	ISM	ENSMUSG00000031278.13	ENST00000502391.6	4992	15	58236	1688	58049	-1688	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAATGTGTTAGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	141115291	141102910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187
ENSMUSG00000031278.13_141103072_141116726_1	chrX	-	1285	5	ISM	ENSMUSG00000031278.13	ENST00000502391.6	4992	15	56801	1849	56614	-1849	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAAAACAACACACACCTA	NA	NA	NA	NA	NA	NA	NA	NA	141116726	141103071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665
ENSMUSG00000031278.13_141103187_141121995_1	chrX	-	1300	6	ISM	ENSMUSG00000031278.13	ENST00000502391.6	4992	15	51532	1964	51345	-1964	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAATGTATGGTATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	141121995	141103186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879
ENSMUSG00000031278.13_141103337_141126194_1	chrX	-	1388	8	ISM	ENSMUSG00000031278.13	ENST00000682031.1	5073	15	47303	2331	47146	-2114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACAGCTTCCAGCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	141126194	141103336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122037_141124330_141124403_141126069
ENSMUSG00000031278.13_141103667_141126147_1	chrX	-	1167	9	ISM	ENSMUSG00000031278.13	ENST00000502391.6	4992	15	47380	2444	47193	-2444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTGATTTCCATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	141126147	141103666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069
ENSMUSG00000031278.13_141103667_141132016_1	chrX	-	1366	11	ISM	ENSMUSG00000031278.13	ENST00000682031.1	5073	15	41481	2661	41324	-2444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTGATTTCCATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	141132016	141103666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122037_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997
ENSMUSG00000031278.13_141103782_141132041_1	chrX	-	1276	11	ISM	ENSMUSG00000031278.13	ENST00000682031.1	5073	15	41456	2776	41299	-2559	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGGACCCCCGAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	141132041	141103781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122037_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997
ENSMUSG00000031278.13_141110977_141133971_1	chrX	-	1304	11	ISM	ENSMUSG00000031278.13	ENST00000682031.1	5073	15	39526	9971	39369	-9754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCAGTAAGTAAGAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	141133971	141110976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122037_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955
ENSMUSG00000031278.13_141111049_141134026_1	chrX	-	1287	11	ISM	ENSMUSG00000031278.13	ENST00000682031.1	5073	15	39471	10043	39314	-9826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGGGTTGATATTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	141134026	141111048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122037_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955
ENSMUSG00000031278.13_141111097_141134123_1	chrX	-	1336	11	ISM	ENSMUSG00000031278.13	ENST00000682031.1	5073	15	39374	10091	39217	-9874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACCAGAAAAAGTTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	141134123	141111096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122037_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955
ENSMUSG00000031278.13_141111927_141134434_1	chrX	-	1290	11	ISM	ENSMUSG00000031278.13	ENST00000682031.1	5073	15	39063	10921	38906	-10704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAATATGTATCTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	141134434	141111926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141111959_141115187_141115380_141116665_141116741_141121879_141122037_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374
ENSMUSG00000031278.13_141115288_141134581_1	chrX	-	1305	10	ISM	ENSMUSG00000031278.13	ENST00000682031.1	5073	15	38916	14282	38759	-14065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAGCAGAAGATTATTG	NA	NA	NA	NA	NA	NA	NA	NA	141134581	141115287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141115380_141116665_141116741_141121879_141122037_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374
ENSMUSG00000031278.13_141116703_141134697_1	chrX	-	1292	9	ISM	ENSMUSG00000031278.13	ENST00000682031.1	5073	15	38800	15697	38643	-15480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCTGTGAAATTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	141134697	141116702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141116741_141121879_141122037_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374
ENSMUSG00000031278.13_141124327_141143432_1	chrX	-	1358	8	ISM	ENSMUSG00000031278.13	ENSMUST00000112907.8	5137	16	29908	23338	29908	-23104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAGAATAGTCATACAGA	NA	NA	NA	NA	NA	NA	NA	NA	141143432	141124326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382
ENSMUSG00000031278.13_141126070_141173340_1	chrX	-	1322	8	ISM	ENSMUSG00000031278.13	ENST00000682031.1	5073	15	157	25064	0	-24847	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACAAAATTTGTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	141173340	141126069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
ENSMUSG00000031278.13_141126303_141173500_1	chrX	-	1358	7	ISM	ENSMUSG00000031278.13	ENST00000682031.1	5073	15	-3	25297	0	-25080	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGATGCTCATTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	141173500	141126302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
ENSMUSG00000031283.17_142070876_142110934_1	chrX	-	933	8	ISM	ENSMUSG00000031283.17	ENST00000444321.2	1329	10	40524	65	40524	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACCACTGTTAGACACAA	NA	NA	NA	NA	NA	NA	NA	NA	142110934	142070875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_142070993_142074090_142074181_142077169_142077338_142082849_142083060_142086344_142086514_142094077_142094146_142108984_142109079_142110917
ENSMUSG00000031283.17_142070936_142110980_1	chrX	-	919	8	ISM	ENSMUSG00000031283.17	ENST00000444321.2	1329	10	40478	125	40478	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGTGCAGAACAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	142110980	142070935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_142070993_142074090_142074181_142077169_142077338_142082849_142083060_142086344_142086514_142094077_142094146_142108984_142109079_142110917
ENSMUSG00000031283.17_142070972_142111062_1	chrX	-	965	8	ISM	ENSMUSG00000031283.17	ENST00000444321.2	1329	10	40396	161	40396	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGAAGCTCAGCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	142111062	142070971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_142070993_142074090_142074181_142077169_142077338_142082849_142083060_142086344_142086514_142094077_142094146_142108984_142109079_142110917
ENSMUSG00000031283.17_142077260_142151412_1	chrX	-	921	8	ISM	ENSMUSG00000031283.17	ENST00000444321.2	1329	10	46	6449	46	2910	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGGAGGATGGAGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	142151412	142077259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_142077338_142082849_142083060_142086344_142086514_142094077_142094146_142108984_142109079_142110917_142111061_142148892_142148987_142151347
ENSMUSG00000031283.17_142077321_142151457_1	chrX	-	905	8	ISM	ENSMUSG00000031283.17	ENST00000444321.2	1329	10	1	6510	1	2849	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTGACAGCAAAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	142151457	142077320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_142077338_142082849_142083060_142086344_142086514_142094077_142094146_142108984_142109079_142110917_142111061_142148892_142148987_142151347
ENSMUSG00000031284.17_142448741_142516139_1	chrX	+	876	8	ISM	ENSMUSG00000031284.17	ENST00000519681.5	2516	17	51	58675	0	-58675	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGATGACAATGAACC	NA	NA	NA	NA	NA	NA	NA	NA	142448740	142516139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_142448840_142454557_142454705_142476282_142476485_142492643_142492745_142495273_142495337_142498131_142498286_142499106_142499145_142516067
ENSMUSG00000031284.17_142492690_142548374_1	chrX	+	832	9	ISM	ENSMUSG00000031284.17	ENST00000519681.5	2516	17	44000	26440	16408	-26440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAAGTGTTTTATCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	142492689	142548374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_142492745_142495273_142495337_142498131_142498286_142499106_142499145_142516067_142516200_142518252_142518419_142526933_142526998_142547957_142548007_142548263
ENSMUSG00000031299.11_158906714_158907548_1	chrX	-	264	2	ISM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	13861	1509	13861	-1509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACAGGAAATACCCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	158907548	158906713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_158906944_158907514
ENSMUSG00000031299.11_158906890_158910323_1	chrX	-	268	4	ISM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	11086	1685	11086	-1685	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATCCTGAGCCCCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	158910323	158906889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286
ENSMUSG00000031299.11_158910629_158912499_1	chrX	-	281	3	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	8910	-5424	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGCAGCAGCCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	158912499	158910628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_158910719_158911456_158911554_158912405
ENSMUSG00000031299.11_158910687_158913148_1	chrX	-	267	4	ISM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	8261	5482	8261	-5482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTACCTTGCATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	158913148	158910686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_158910725_158911460_158911554_158912405_158912498_158913104
ENSMUSG00000031299.11_158911532_158915111_1	chrX	-	288	4	ISM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	6298	6327	6298	-6327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGCCTGCAAGTACAAT	NA	NA	NA	NA	NA	NA	NA	NA	158915111	158911531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_158911554_158912405_158912498_158913104_158913232_158915064
ENSMUSG00000031299.11_158912433_158915142_1	chrX	-	270	3	ISM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	6267	7228	6267	-7228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCAACGGCATCGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	158915142	158912432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_158912498_158913104_158913232_158915064
ENSMUSG00000031299.11_158913178_158916228_1	chrX	-	288	3	ISM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	5181	7973	5181	-7973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCCTATCGAGCACATGG	NA	NA	NA	NA	NA	NA	NA	NA	158916228	158913177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_158913232_158915064_158915239_158916168
ENSMUSG00000031299.11_158915064_158921325_1	chrX	-	309	3	ISM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	84	9859	84	-9859	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGATAGGTTTGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	158921325	158915063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_158915239_158916168_158916229_158921251
ENSMUSG00000031302.17_100342816_100358848_1	chrX	+	995	4	ISM	ENSMUSG00000031302.17	ENST00000536169.5	3837	6	47	6106	0	-6106	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATTACTGTCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	100342815	100358848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100342903_100345390_100346038_100352362_100352513_100358737
ENSMUSG00000031302.17_100345607_100361757_1	chrX	+	990	4	ISM	ENSMUSG00000031302.17	ENST00000536169.5	3837	6	2838	3197	2791	-3197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGATGTCATTCCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	100345606	100361757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100346038_100352362_100352513_100358737_100358924_100361534
ENSMUSG00000031302.17_100345661_100361810_1	chrX	+	989	4	ISM	ENSMUSG00000031302.17	ENST00000536169.5	3837	6	2892	3144	2845	-3144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACTATGATATCATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	100345660	100361810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100346038_100352362_100352513_100358737_100358924_100361534
ENSMUSG00000031302.17_100345906_100362056_1	chrX	+	990	4	ISM	ENSMUSG00000031302.17	ENST00000536169.5	3837	6	3137	2898	3090	-2898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCACCAGTGGGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	100345905	100362056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100346038_100352362_100352513_100358737_100358924_100361534
ENSMUSG00000031302.17_100352362_100362281_1	chrX	+	1084	3	ISM	ENSMUSG00000031302.17	ENST00000536169.5	3837	6	9593	2673	9546	-2673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTCGTCATGACCTAT	NA	NA	NA	NA	NA	NA	NA	NA	100352361	100362281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100352513_100358737_100358924_100361534
ENSMUSG00000031302.17_100352420_100362281_1	chrX	+	1026	3	ISM	ENSMUSG00000031302.17	ENST00000536169.5	3837	6	9651	2673	9604	-2673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTCGTCATGACCTAT	NA	NA	NA	NA	NA	NA	NA	NA	100352419	100362281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100352513_100358737_100358924_100361534
ENSMUSG00000031302.17_100352465_100362297_1	chrX	+	997	3	ISM	ENSMUSG00000031302.17	ENST00000536169.5	3837	6	9696	2657	9649	-2657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGGACCAACTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	100352464	100362297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100352513_100358737_100358924_100361534
ENSMUSG00000031302.17_100358794_100363098_1	chrX	+	994	3	ISM	ENSMUSG00000031302.17	ENST00000536169.5	3837	6	16025	1856	15978	-1856	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCCAAATACAATCCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	100358793	100363098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100358924_100361534_100362325_100363024
ENSMUSG00000031302.17_100361675_100363409_1	chrX	+	1035	2	ISM	ENSMUSG00000031302.17	ENST00000536169.5	3837	6	18906	1545	18859	-1545	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTGAGAACCCTCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	100361674	100363409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100362325_100363024
ENSMUSG00000031303.9_158771429_158900740_1	chrX	+	3216	23	ISM	ENSMUSG00000031303.9	ENST00000338883.9	3819	29	-67	4867	0	-4867	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGCAGCCACAATATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	158771428	158900740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158771802_158784900_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650
ENSMUSG00000031303.9_158771585_158901567_1	chrX	+	3187	24	ISM	ENSMUSG00000031303.9	ENST00000338883.9	3819	29	89	4040	89	-4040	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCCACTGGATGTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	158771584	158901567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158771802_158784900_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536
ENSMUSG00000031303.9_158771764_158902546_1	chrX	+	3124	25	ISM	ENSMUSG00000031303.9	ENST00000338883.9	3819	29	268	3061	268	-3061	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGACAAGGACACAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	158771763	158902546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158771802_158784900_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505
ENSMUSG00000031303.9_158784898_158902719_1	chrX	+	3224	25	ISM	ENSMUSG00000031303.9	ENST00000338883.9	3819	29	13402	2888	13402	-2888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGGACCTTGCAAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	158784897	158902719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902586_158902623
ENSMUSG00000031303.9_158784898_158902719_2	chrX	+	3214	24	NNC	ENSMUSG00000031303.9	novel	3819	29	NA	NA	13402	-2888	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGGACCTTGCAAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	158784897	158902719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_158785051_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874715_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902586_158902623
ENSMUSG00000031303.9_158824035_158905374_1	chrX	+	3138	25	ISM	ENSMUSG00000031303.9	ENST00000338883.9	3819	29	52539	233	52539	-233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCCCTGATGGACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	158824034	158905374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902586_158902623_158902720_158904641_158904755_158905357
ENSMUSG00000031303.9_158824138_158905562_1	chrX	+	3152	26	ISM	ENSMUSG00000031303.9	ENST00000338883.9	3819	29	52642	45	52642	-45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAATGATATCACTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	158824137	158905562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902586_158902623_158902720_158904641_158904755_158905357_158905459_158905529
ENSMUSG00000031303.9_158827056_158905607_1	chrX	+	3156	25	ISM	ENSMUSG00000031303.9	ENST00000338883.9	3819	29	55560	0	55560	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGAGCCTCCCCGACAG	NA	NA	NA	NA	NA	NA	NA	NA	158827055	158905607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902586_158902623_158902720_158904641_158904755_158905357_158905459_158905529
ENSMUSG00000031304.19_100308412_100311861_1	chrX	-	1135	7	NNC	ENSMUSG00000031304.19	novel	1144	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTAACCTCCCCTACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	100311861	100308411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_100308644_100308981_100309049_100309786_100309940_100310583_100310727_100310916_100311102_100311316_100311471_100311660
ENSMUSG00000031304.19_100308412_100311861_2	chrX	-	1143	7	NNC	ENSMUSG00000031304.19	novel	1144	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTAACCTCCCCTACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	100311861	100308411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_100308644_100308981_100309049_100309786_100309950_100310583_100310727_100310916_100311102_100311318_100311471_100311660
ENSMUSG00000031304.19_100308412_100311861_3	chrX	-	1138	7	NNC	ENSMUSG00000031304.19	novel	1144	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTAACCTCCCCTACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	100311861	100308411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_100308644_100308981_100309049_100309786_100309950_100310583_100310727_100310916_100311095_100311316_100311471_100311660
ENSMUSG00000031304.19_100308412_100311861_4	chrX	-	1145	7	FSM	ENSMUSG00000031304.19	ENST00000374188.7	1144	7	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTAACCTCCCCTACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	100311861	100308411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_100308644_100308981_100309049_100309786_100309950_100310583_100310727_100310916_100311102_100311316_100311471_100311660
ENSMUSG00000031309.16_158086277_158146779_1	chrX	+	2515	21	FSM	ENSMUSG00000031309.16	ENST00000457145.6	2777	21	19	243	19	-152	multi-exon	FALSE	canonical	NA	NA	NA	NA	2495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTATTTTTATAGGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	158086276	158146779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_158086397_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ENSMUSG00000031309.16_158094460_158146931_1	chrX	+	2547	20	ISM	ENSMUSG00000031309.16	ENST00000457145.6	2777	21	8202	91	8202	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATATACAGTACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	158094459	158146931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ENSMUSG00000031309.16_158130012_158146931_1	chrX	+	1230	6	ISM	ENSMUSG00000031309.16	ENST00000457145.6	2777	21	43754	91	43754	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATATACAGTACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	158130011	158146931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ENSMUSG00000031310.17_100459385_100461939_1	chrX	-	627	5	ISM	ENSMUSG00000031310.17	ENST00000373981.5	1832	7	1919	846	1465	-821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAGAAGACTGGAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	100461939	100459384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878
ENSMUSG00000031310.17_100459454_100461972_1	chrX	-	591	5	ISM	ENSMUSG00000031310.17	ENST00000373981.5	1832	7	1886	915	1432	-890	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGCCCAGCAGCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	100461972	100459453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878
ENSMUSG00000031310.17_100459520_100462008_1	chrX	-	561	5	ISM	ENSMUSG00000031310.17	ENST00000373981.5	1832	7	1850	981	1396	-956	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGTACAGACTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	100462008	100459519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878
ENSMUSG00000031310.17_100459880_100462146_1	chrX	-	567	4	ISM	ENSMUSG00000031310.17	ENST00000373981.5	1832	7	1712	1341	1258	-1316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCCTATCAGCGCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	100462146	100459879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_100460068_100460514_100460582_100460892_100460937_100461878
ENSMUSG00000031310.17_100459880_100462194_1	chrX	-	615	4	ISM	ENSMUSG00000031310.17	ENST00000373981.5	1832	7	1664	1341	1210	-1316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCCTATCAGCGCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	100462194	100459879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_100460068_100460514_100460582_100460892_100460937_100461878
ENSMUSG00000031310.17_100459989_100462268_1	chrX	-	580	4	ISM	ENSMUSG00000031310.17	ENST00000373981.5	1832	7	1590	1450	1136	-1425	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTCGCATGTCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	100462268	100459988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_100460068_100460514_100460582_100460892_100460937_100461878
ENSMUSG00000031310.17_100460529_100462353_1	chrX	-	572	3	ISM	ENSMUSG00000031310.17	ENST00000373981.5	1832	7	1505	1990	1051	-1965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCACTGAGAGCAGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	100462353	100460528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_100460582_100460892_100460937_100461878
ENSMUSG00000031310.17_100462039_100463822_1	chrX	-	578	2	ISM	ENSMUSG00000031310.17	ENSMUST00000118092.8	1502	6	0	3495	0	-3475	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCTCCCCTGGGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	100463822	100462038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_100462559_100463764
ENSMUSG00000031311.18_100473161_100491636_1	chrX	+	2001	12	FSM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	0	561	0	-561	multi-exon	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTCTCTTTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	100473160	100491636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ENSMUSG00000031311.18_100473161_100491652_1	chrX	+	2017	12	FSM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	0	545	0	-545	multi-exon	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTCTTGTTTTAATTAC	NA	NA	NA	NA	NA	NA	NA	NA	100473160	100491652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ENSMUSG00000031311.18_100473161_100491700_1	chrX	+	2065	12	FSM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	0	497	0	-497	multi-exon	FALSE	canonical	NA	NA	NA	NA	1213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACACTGCCATATATACC	NA	NA	NA	NA	NA	NA	NA	NA	100473160	100491700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ENSMUSG00000031311.18_100473161_100491705_1	chrX	+	2070	12	FSM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	0	492	0	-492	multi-exon	FALSE	canonical	NA	NA	NA	NA	1374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGCCATATATACCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	100473160	100491705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ENSMUSG00000031311.18_100473341_100491747_1	chrX	+	1932	12	FSM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	180	450	180	-450	multi-exon	FALSE	canonical	NA	NA	NA	NA	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCCATCCCTCCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	100473340	100491747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ENSMUSG00000031311.18_100474098_100491888_1	chrX	+	2046	11	ISM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	937	309	937	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTATATCTTAAAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	100474097	100491888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ENSMUSG00000031311.18_100483093_100492064_1	chrX	+	1992	9	ISM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	9932	133	9932	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTAGCTACGCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	100483092	100492064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ENSMUSG00000031311.18_100483093_100492197_1	chrX	+	2125	9	ISM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	9932	0	9932	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	100483092	100492197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ENSMUSG00000031311.18_100483208_100492197_1	chrX	+	2010	9	ISM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	10047	0	10047	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	100483207	100492197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ENSMUSG00000031311.18_100485121_100492197_1	chrX	+	1932	8	ISM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	11960	0	11960	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	100485120	100492197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ENSMUSG00000031312.6_100492806_100495222_1	chrX	+	544	4	ISM	ENSMUSG00000031312.6	ENST00000538820.1	1390	10	30	1859	30	-1859	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATATCTCAAGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	100492805	100495222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100493117_100493210_100493268_100493346_100493493_100495192
ENSMUSG00000031312.6_100493070_100495747_1	chrX	+	502	7	ISM	ENSMUSG00000031312.6	ENST00000538820.1	1390	10	294	1334	294	-1334	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGACTCTGGATTTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	100493069	100495747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100493117_100493210_100493268_100493346_100493493_100495192_100495288_100495391_100495451_100495559_100495631_100495720
ENSMUSG00000031312.6_100493234_100496114_1	chrX	+	540	7	ISM	ENSMUSG00000031312.6	ENST00000538820.1	1390	10	458	967	458	-967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTGTAGTAGTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	100493233	100496114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100493268_100493346_100493493_100495192_100495288_100495391_100495451_100495559_100495631_100495720_100495821_100496079
ENSMUSG00000031312.6_100493413_100496496_1	chrX	+	582	7	ISM	ENSMUSG00000031312.6	ENST00000538820.1	1390	10	637	585	637	-585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGAAGAGAAGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	100493412	100496496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100493493_100495192_100495288_100495391_100495451_100495559_100495631_100495720_100495821_100496079_100496194_100496433
ENSMUSG00000031312.6_100495189_100496750_1	chrX	+	519	7	ISM	ENSMUSG00000031312.6	ENST00000538820.1	1390	10	2413	331	2413	-331	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGAGCTCTGTCTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	100495188	100496750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100495288_100495391_100495451_100495559_100495631_100495720_100495821_100496079_100496194_100496433_100496497_100496737
ENSMUSG00000031312.6_100495567_100496904_1	chrX	+	508	5	ISM	ENSMUSG00000031312.6	ENST00000538820.1	1390	10	2791	177	2791	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGATGATGACCTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	100495566	100496904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100495631_100495720_100495821_100496079_100496194_100496433_100496497_100496737
ENSMUSG00000031312.6_100495717_100497006_1	chrX	+	550	4	ISM	ENSMUSG00000031312.6	ENST00000538820.1	1390	10	2941	75	2941	-75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACCGCCTTAGAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	100495716	100497006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100495821_100496079_100496194_100496433_100496497_100496737
ENSMUSG00000031314.19_100577167_100596834_1	chrX	+	2446	16	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	802	46506	681	-46506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTATGGTATCCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	100577166	100596834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771
ENSMUSG00000031314.19_100582720_100600188_1	chrX	+	2444	16	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	6355	43152	6234	-43152	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGAGGTGACTGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	100582719	100600188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127
ENSMUSG00000031314.19_100584394_100600455_1	chrX	+	2457	16	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	8029	42885	7908	-42885	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACAGTCACAGGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	100584393	100600455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429
ENSMUSG00000031314.19_100584459_100600499_1	chrX	+	2436	16	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	8094	42841	7973	-42841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAATGCCAAGCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	100584458	100600499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429
ENSMUSG00000031314.19_100584512_100600549_1	chrX	+	2433	16	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	8147	42791	8026	-42791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGGTTTAGAAGAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	100584511	100600549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429
ENSMUSG00000031314.19_100586168_100603415_1	chrX	+	2459	17	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	9803	39925	9682	-39925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAGCTGAAGACAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	100586167	100603415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371
ENSMUSG00000031314.19_100586234_100603500_1	chrX	+	2478	17	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	9869	39840	9748	-39840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGAGCGGGAGGAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	100586233	100603500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371
ENSMUSG00000031314.19_100586725_100605715_1	chrX	+	2441	17	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	10360	37625	10239	-37625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGACACAGCTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	100586724	100605715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679
ENSMUSG00000031314.19_100586785_100605773_1	chrX	+	2439	17	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	10420	37567	10299	-37567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATCGAACATTTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	100586784	100605773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679
ENSMUSG00000031314.19_100587599_100606462_1	chrX	+	2466	17	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	11234	36878	11113	-36878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGAACGGCGGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	100587598	100606462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419
ENSMUSG00000031314.19_100587661_100606518_1	chrX	+	2460	17	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	11296	36822	11175	-36822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAAAAGCTAAAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	100587660	100606518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419
ENSMUSG00000031314.19_100587710_100606572_1	chrX	+	2465	17	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	11345	36768	11224	-36768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTGACTTAAAAGTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	100587709	100606572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419
ENSMUSG00000031314.19_100590578_100607168_1	chrX	+	2448	17	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	14213	36172	14092	-36172	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGACAAATAAATTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	100590577	100607168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133
ENSMUSG00000031314.19_100590685_100607292_1	chrX	+	2465	17	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	14320	36048	14199	-36048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCAAGGTTGAAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	100590684	100607292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133
ENSMUSG00000031314.19_100592064_100613545_1	chrX	+	2483	17	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	15699	29795	15578	-29795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTAATTGTGAAAAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	100592063	100613545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400
ENSMUSG00000031314.19_100592780_100620231_1	chrX	+	2451	18	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	16415	23109	16294	-23109	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGACGATGATGATCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	100592779	100620231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186
ENSMUSG00000031314.19_100596015_100622035_1	chrX	+	2440	18	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	19650	21305	19529	-21305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGCCAACAGTGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	100596014	100622035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977
ENSMUSG00000031314.19_100596293_100634195_1	chrX	+	2514	19	ISM	ENSMUSG00000031314.19	ENSMUST00000149274.9	5954	39	19928	9145	19807	-9145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGCCAAAAGAATGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	100596292	100634195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078
ENSMUSG00000031314.19_100596800_100637638_1	chrX	+	2434	19	ISM	ENSMUSG00000031314.19	ENST00000683782.1	6152	40	20314	6444	20314	-5702	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGTGCTACTTCAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	100596799	100637638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545
ENSMUSG00000031314.19_100600142_100639010_1	chrX	+	2466	19	ISM	ENSMUSG00000031314.19	ENST00000683782.1	6152	40	23656	5072	23656	-4330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATGAGGAAGATGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	100600141	100639010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638553_100638646_100638905
ENSMUSG00000031314.19_100600437_100639799_1	chrX	+	2481	19	ISM	ENSMUSG00000031314.19	ENST00000683782.1	6152	40	23951	4283	23951	-3541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAAGCATGATGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	100600436	100639799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638553_100638646_100638905_100639063_100639693
ENSMUSG00000031314.19_100600821_100642973_1	chrX	+	2459	19	ISM	ENSMUSG00000031314.19	ENST00000683782.1	6152	40	24335	1109	24335	-367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCGGTGGGTATGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	100600820	100642973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638553_100638646_100638905_100639063_100639693_100639872_100642914
ENSMUSG00000031314.19_100600905_100643058_1	chrX	+	2460	19	ISM	ENSMUSG00000031314.19	ENST00000683782.1	6152	40	24419	1024	24419	-282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGAGGACGAGGAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	100600904	100643058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638553_100638646_100638905_100639063_100639693_100639872_100642914
ENSMUSG00000031314.19_100603460_100643704_1	chrX	+	2457	19	ISM	ENSMUSG00000031314.19	ENST00000683782.1	6152	40	26974	378	26974	364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGCAAAGTAACTACTC	NA	NA	NA	NA	NA	NA	NA	NA	100603459	100643704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638553_100638646_100638905_100639063_100639693_100639872_100642914_100643133_100643641
ENSMUSG00000031314.19_100605698_100643817_1	chrX	+	2461	18	ISM	ENSMUSG00000031314.19	ENST00000683782.1	6152	40	29212	265	29212	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTAAATAAGAGCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	100605697	100643817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638553_100638646_100638905_100639063_100639693_100639872_100642914_100643133_100643641
ENSMUSG00000031314.19_100605774_100643875_1	chrX	+	2443	18	ISM	ENSMUSG00000031314.19	ENST00000683782.1	6152	40	29288	207	29288	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTAATCAGAGAACTCTA	NA	NA	NA	NA	NA	NA	NA	NA	100605773	100643875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638553_100638646_100638905_100639063_100639693_100639872_100642914_100643133_100643641
ENSMUSG00000031314.19_100605844_100643935_1	chrX	+	2433	18	ISM	ENSMUSG00000031314.19	ENST00000683782.1	6152	40	29358	147	29358	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGAATCATGTGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	100605843	100643935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638553_100638646_100638905_100639063_100639693_100639872_100642914_100643133_100643641
ENSMUSG00000031314.19_100606467_100644073_1	chrX	+	2474	17	ISM	ENSMUSG00000031314.19	ENST00000683782.1	6152	40	29981	9	29981	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGTACCTGCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	100606466	100644073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638553_100638646_100638905_100639063_100639693_100639872_100642914_100643133_100643641
ENSMUSG00000031320.10_101228547_101233000_1	chrX	-	965	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	101233000	101228546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231049_101231427_101231609_101231899_101231978_101232903
ENSMUSG00000031320.10_101228547_101233000_2	chrX	-	967	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	101233000	101228546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231435_101231609_101231899_101231978_101232903
ENSMUSG00000031320.10_101228547_101233000_3	chrX	-	969	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	101233000	101228546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_101228738_101229108_101229267_101230001_101230168_101230960_101231059_101231427_101231609_101231899_101231978_101232903
ENSMUSG00000031328.17_73267147_73282765_1	chrX	-	2758	16	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	7313	67	7313	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGTCCTATGTACAACC	NA	NA	NA	NA	NA	NA	NA	NA	73282765	73267146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73280392_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704
ENSMUSG00000031328.17_73267147_73282822_1	chrX	-	2815	16	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	7256	67	7256	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGTCCTATGTACAACC	NA	NA	NA	NA	NA	NA	NA	NA	73282822	73267146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73280392_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704
ENSMUSG00000031328.17_73267395_73283324_1	chrX	-	2774	18	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	6754	315	6754	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCCACCTAAGTTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	73283324	73267394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73280392_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257
ENSMUSG00000031328.17_73267395_73283403_1	chrX	-	2853	18	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	6675	315	6675	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCCACCTAAGTTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	73283403	73267394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73280392_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257
ENSMUSG00000031328.17_73267510_73283566_1	chrX	-	2801	19	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	6512	430	6512	-363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCCTCTATAGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	73283566	73267509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73280392_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551
ENSMUSG00000031328.17_73268440_73283870_1	chrX	-	2827	19	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	6208	1360	6208	-1293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTAGTAGCCAAAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	73283870	73268439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73280392_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810
ENSMUSG00000031328.17_73268741_73284115_1	chrX	-	2771	19	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	5963	1661	5963	-1594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATACCCCCATGGCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	73284115	73268740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73280392_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018
ENSMUSG00000031328.17_73269055_73284909_1	chrX	-	2838	19	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	5169	1975	5169	-1908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGCTTAGTGTCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	73284909	73269054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73280392_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708
ENSMUSG00000031328.17_73269839_73285073_1	chrX	-	2762	19	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	5005	2759	5005	-2692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGTGCTATGTCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	73285073	73269838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73280392_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992
ENSMUSG00000031328.17_73269889_73285135_1	chrX	-	2774	19	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	4943	2809	4943	-2742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCAAGGGGGCAATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	73285135	73269888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73280392_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992
ENSMUSG00000031328.17_73270843_73286160_1	chrX	-	2847	20	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	3918	3763	3918	-3696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTCCTGTGGTGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	73286160	73270842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73270942_73271096_73271364_73271457_73271581_73280392_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097
ENSMUSG00000031328.17_73271146_73286365_1	chrX	-	2816	20	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	3713	4066	3713	-3999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGTGCTGGAGGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	73286365	73271145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73271364_73271457_73271581_73280392_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333
ENSMUSG00000031328.17_73271236_73278248_1	chrX	-	2171	15	ISM	ENSMUSG00000031328.17	ENSMUST00000101454.9	8345	46	11892	4167	11830	-4089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTCAGTGTCAAGTACAA	NA	NA	NA	NA	NA	NA	NA	NA	73278248	73271235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209
ENSMUSG00000031328.17_73271297_73278297_1	chrX	-	2159	15	ISM	ENSMUSG00000031328.17	ENSMUST00000101454.9	8345	46	11843	4228	11781	-4150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTAGAAGGAGAGAACCATA	NA	NA	NA	NA	NA	NA	NA	NA	73278297	73271296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209
ENSMUSG00000031328.17_73271316_73286576_1	chrX	-	2766	21	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	3502	4236	3502	-4169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCCATGAGGCAGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	73286576	73271315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73271364_73271457_73271581_73280392_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522
ENSMUSG00000031328.17_73271458_73286715_1	chrX	-	2857	20	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	3363	4378	3363	-4311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGGAAAAGATCAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	73286715	73271457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73271581_73280392_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522
ENSMUSG00000031328.17_73271692_73278636_1	chrX	-	2218	14	ISM	ENSMUSG00000031328.17	ENSMUST00000101454.9	8345	46	11504	4623	11442	-4545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTGGCAGCCATACC	NA	NA	NA	NA	NA	NA	NA	NA	73278636	73271691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470
ENSMUSG00000031328.17_73272488_73279293_1	chrX	-	2139	15	ISM	ENSMUSG00000031328.17	ENSMUST00000101454.9	8345	46	10847	5419	10785	-5341	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCTGATATCCCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	73279293	73272487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225
ENSMUSG00000031328.17_73277600_73281558_1	chrX	-	2215	12	ISM	ENSMUSG00000031328.17	ENSMUST00000033699.13	8312	47	8603	10453	8520	-10453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCCTGCCTGTGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	73281558	73277599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461
ENSMUSG00000031328.17_73279687_73285072_1	chrX	-	2196	15	ISM	ENSMUSG00000031328.17	ENSMUST00000033699.13	8312	47	5089	12540	5006	-12540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAACGGGGATGGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	73285072	73279686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992
ENSMUSG00000031328.17_73280467_73289754_1	chrX	-	2801	20	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	324	13387	324	-13320	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACGTTTTGTGCCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	73289754	73280466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ENSMUSG00000031328.17_73280539_73289789_1	chrX	-	2764	20	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	289	13459	289	-13392	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATTGTGAGTCCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	73289789	73280538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ENSMUSG00000031328.17_73280582_73289854_1	chrX	-	2786	20	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	224	13502	224	-13435	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAAAGTCAAAGGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	73289854	73280581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ENSMUSG00000031328.17_73280739_73289970_1	chrX	-	2861	19	ISM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	108	13659	108	-13592	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGTGACAGTAAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	73289970	73280738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ENSMUSG00000031328.17_73283000_73290140_1	chrX	-	2174	13	ISM	ENSMUSG00000031328.17	ENSMUST00000033699.13	8312	47	21	15853	0	-15853	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGTTCACAGTTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	73290140	73282999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ENSMUSG00000031333.8_103327649_103347861_1	chrX	-	1528	11	ISM	ENSMUSG00000031333.8	ENST00000620875.5	1896	13	38328	0	38328	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACACAGACATTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	103347861	103327648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737
ENSMUSG00000031333.8_103334792_103348932_1	chrX	-	1451	11	ISM	ENSMUSG00000031333.8	ENST00000620875.5	1896	13	37257	7143	37257	-7143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCATTGCACATAGATT	NA	NA	NA	NA	NA	NA	NA	NA	103348932	103334791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875
ENSMUSG00000031333.8_103338143_103386138_1	chrX	-	1452	11	ISM	ENSMUSG00000031333.8	ENST00000620875.5	1896	13	51	10494	51	-10494	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGAAGAATCCCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	103386138	103338142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103386099
ENSMUSG00000031342.18_165022301_165168684_1	chrX	+	995	7	NNC	ENSMUSG00000031342.18	novel	992	7	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTATTTACTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	165022300	165168684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_165022343_165155633_165155821_165158628_165158786_165162983_165163156_165165445_165165519_165166930_165166997_165168386
ENSMUSG00000031342.18_165022301_165168684_2	chrX	+	996	7	FSM	ENSMUSG00000031342.18	ENST00000398361.7	992	7	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTATTTACTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	165022300	165168684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_165022343_165155633_165155821_165158628_165158786_165162983_165163156_165165444_165165519_165166930_165166997_165168386
ENSMUSG00000031342.18_165022301_165168684_3	chrX	+	994	7	NNC	ENSMUSG00000031342.18	novel	992	7	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1059	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTATTTACTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	165022300	165168684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_165022343_165155633_165155821_165158628_165158786_165162985_165163156_165165444_165165519_165166930_165166997_165168386
ENSMUSG00000031342.18_165022301_165168684_4	chrX	+	995	7	NNC	ENSMUSG00000031342.18	novel	992	7	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTATTTACTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	165022300	165168684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_165022343_165155633_165155821_165158629_165158786_165162983_165163156_165165444_165165519_165166930_165166997_165168386
ENSMUSG00000031342.18_165022301_165168684_5	chrX	+	988	7	NNC	ENSMUSG00000031342.18	novel	992	7	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTATTTACTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	165022300	165168684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_165022343_165155633_165155821_165158628_165158778_165162983_165163156_165165444_165165519_165166930_165166997_165168386
ENSMUSG00000031342.18_165022301_165168684_6	chrX	+	989	7	NNC	ENSMUSG00000031342.18	novel	992	7	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTATTTACTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	165022300	165168684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_165022343_165155633_165155814_165158628_165158786_165162983_165163156_165165444_165165519_165166930_165166997_165168386
ENSMUSG00000031347.13_71957138_71960462_1	chrX	-	1192	4	NNC	ENSMUSG00000031347.13	novel	1026	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTTGTGGATTTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	71960462	71957137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_71957900_71958445_71958578_71959870_71960000_71960293
ENSMUSG00000031349.5_71962163_72000942_1	chrX	+	990	8	FSM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	0	1178	0	-1178	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACAGGCCTCAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	71962162	72000942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_71962300_71969899_71970017_71973229_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
ENSMUSG00000031349.5_71969995_72001072_1	chrX	+	888	7	ISM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	7832	1048	7832	-1048	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATTCGAGTGGCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	71969994	72001072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_71970017_71973229_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
ENSMUSG00000031349.5_71973358_72001177_1	chrX	+	843	6	ISM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	11195	943	11195	-943	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACTGTGCAGAGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	71973357	72001177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
ENSMUSG00000031349.5_71992855_72001320_1	chrX	+	871	5	ISM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	30692	800	30692	-800	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTAGCATACCTGACACC	NA	NA	NA	NA	NA	NA	NA	NA	71992854	72001320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
ENSMUSG00000031349.5_71996471_72001455_1	chrX	+	921	4	ISM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	34308	665	34308	-665	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCCTGGGTTCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	71996470	72001455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_71996578_71998677_71998821_71999942_72000046_72000887
ENSMUSG00000031349.5_71996544_72001484_1	chrX	+	877	4	ISM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	34381	636	34381	-636	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTAAAGTGAAGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	71996543	72001484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_71996578_71998677_71998821_71999942_72000046_72000887
ENSMUSG00000031349.5_71998678_72001601_1	chrX	+	960	3	ISM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	36515	519	36515	-519	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGATGAATGTAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	71998677	72001601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_71998821_71999942_72000046_72000887
ENSMUSG00000031352.11_168094526_168103276_1	chrX	-	2313	7	NNC	ENSMUSG00000031352.11	novel	2320	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTAGAGTGATTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	168103276	168094525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_168096019_168096583_168096671_168098597_168098711_168099541_168099691_168099991_168100144_168102433_168102587_168103110
ENSMUSG00000031353.14_161543458_161555228_1	chrX	+	855	6	ISM	ENSMUSG00000031353.14	ENSMUST00000112326.8	1430	10	0	3663	0	-3663	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCAAAGGAAGGCAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	161543457	161555228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200
ENSMUSG00000031353.14_161543595_161555272_1	chrX	+	762	6	ISM	ENSMUSG00000031353.14	ENSMUST00000112326.8	1430	10	137	3619	137	-3619	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACTCAGCTGTTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	161543594	161555272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200
ENSMUSG00000031353.14_161543642_161555326_1	chrX	+	769	6	ISM	ENSMUSG00000031353.14	ENSMUST00000112326.8	1430	10	184	3565	184	-3565	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCTGTTGCTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	161543641	161555326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200
ENSMUSG00000031353.14_161543898_161561791_1	chrX	+	2031	12	NNC	ENSMUSG00000031353.14	novel	2039	12	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTGTTCTTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	161543897	161561791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_161544293_161544570_161544716_161551852_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ENSMUSG00000031353.14_161543898_161561791_2	chrX	+	2036	12	FSM	ENSMUSG00000031353.14	ENST00000380084.8	2039	12	6	-3	6	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	4677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTGTTCTTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	161543897	161561791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_161544293_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ENSMUSG00000031353.14_161558739_161561936_1	chrX	+	755	3	ISM	ENSMUSG00000031353.14	ENST00000380084.8	2039	12	14847	-148	14847	148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTCTACAGAATTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	161558738	161561936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_161558790_161560767_161560879_161561343
ENSMUSG00000031353.14_161560767_161562091_1	chrX	+	860	2	ISM	ENSMUSG00000031353.14	ENST00000380084.8	2039	12	16875	-303	16875	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATCTGCATCATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	161560766	161562091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_161560879_161561343
ENSMUSG00000031357.4_161640053_161642444_1	chrX	-	1102	2	ISM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	28999	0	28999	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTATAGAATGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	161642444	161640052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_161641005_161642294
ENSMUSG00000031357.4_161640177_161642927_1	chrX	-	1035	3	ISM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	28516	124	28516	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGCTTTTTGTAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	161642927	161640176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_161641005_161642294_161642443_161642868
ENSMUSG00000031357.4_161640466_161655650_1	chrX	-	1035	5	ISM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	15793	413	15793	-413	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTTTCAAAATATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	161655650	161640465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055_161646205_161655510
ENSMUSG00000031357.4_161640734_161666035_1	chrX	-	980	8	ISM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	5408	681	5408	-681	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTGTAATAATCAGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	161666035	161640733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055_161646205_161655510_161655651_161661326_161661401_161665675_161665743_161665963
ENSMUSG00000031357.4_161640905_161671259_1	chrX	-	1051	9	FSM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	184	852	184	-852	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAGATGCTTCAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	161671259	161640904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055_161646205_161655510_161655651_161661326_161661401_161665675_161665743_161665963_161666083_161671064
ENSMUSG00000031358.18_167437118_167452522_1	chrX	-	1762	8	ISM	ENSMUSG00000031358.18	ENST00000649685.1	1407	11	2813	-718	2813	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGAAGCAAGAGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	167452522	167437117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485
ENSMUSG00000031358.18_167437257_167452578_1	chrX	-	1679	8	ISM	ENSMUSG00000031358.18	ENST00000649685.1	1407	11	2757	-579	2757	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTTTTGTTGCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	167452578	167437256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485
ENSMUSG00000031358.18_167437513_167454814_1	chrX	-	1673	11	ISM	ENSMUSG00000031358.18	ENSMUST00000033725.16	2399	13	2080	400	521	323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCCATGAACGTATACT	NA	NA	NA	NA	NA	NA	NA	NA	167454814	167437512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790
ENSMUSG00000031358.18_167437622_167456768_1	chrX	-	1681	12	FSM	ENSMUSG00000031358.18	ENSMUST00000112137.2	2316	12	126	509	126	214	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTACTGATTACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	167456768	167437621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167456723
ENSMUSG00000031358.18_167437670_167456894_1	chrX	-	1759	12	FSM	ENSMUSG00000031358.18	ENSMUST00000112137.2	2316	12	0	557	0	166	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGGAGGGAGTCGATTT	NA	NA	NA	NA	NA	NA	NA	NA	167456894	167437669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167456723
ENSMUSG00000031358.18_167437719_167456894_1	chrX	-	1710	12	FSM	ENSMUSG00000031358.18	ENSMUST00000112137.2	2316	12	0	606	0	117	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTCTGTTAAGAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	167456894	167437718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167456723
ENSMUSG00000031358.18_167437835_167455335_1	chrX	-	1408	11	FSM	ENSMUSG00000031358.18	ENST00000649685.1	1407	11	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGGCTTTATACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	167455335	167437834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167454138_167454240_167454790_167454887_167455258
ENSMUSG00000031358.18_167437835_167455335_2	chrX	-	1407	11	NNC	ENSMUSG00000031358.18	novel	1407	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGGCTTTATACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	167455335	167437834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167454139_167454240_167454790_167454887_167455258
ENSMUSG00000031358.18_167441686_167456775_1	chrX	-	1268	11	ISM	ENSMUSG00000031358.18	ENSMUST00000033725.16	2399	13	119	4573	119	-3850	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTATCCGCCAGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	167456775	167441685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167455258_167455342_167456723
ENSMUSG00000031360.15_161684628_161814714_1	chrX	+	2655	19	FSM	ENSMUSG00000031360.15	ENSMUST00000112303.8	3289	19	27	607	0	399	multi-exon	TRUE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATTCAAATTACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	161684627	161814714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_161684836_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUSG00000031360.15_161684765_161814774_1	chrX	+	2578	19	FSM	ENSMUSG00000031360.15	ENSMUST00000112303.8	3289	19	164	547	0	459	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCATTTTAATCTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	161684764	161814774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_161684836_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUSG00000031360.15_161684765_161814859_1	chrX	+	2663	19	FSM	ENSMUSG00000031360.15	ENSMUST00000112303.8	3289	19	164	462	0	-462	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTTTTATTACACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	161684764	161814859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_161684836_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUSG00000031360.15_161686491_161814975_1	chrX	+	2647	18	ISM	ENSMUSG00000031360.15	ENSMUST00000112301.8	3099	19	1625	346	1625	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGCATAGTGCAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	161686490	161814975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUSG00000031360.15_161686575_161815041_1	chrX	+	2629	18	ISM	ENSMUSG00000031360.15	ENSMUST00000112301.8	3099	19	1709	280	1709	-280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGGCCTCGACCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	161686574	161815041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUSG00000031360.15_161693041_161815148_1	chrX	+	2640	17	ISM	ENSMUSG00000031360.15	ENSMUST00000112301.8	3099	19	8175	173	8175	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCGATACATAGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	161693040	161815148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUSG00000031360.15_161693105_161815199_1	chrX	+	2627	17	ISM	ENSMUSG00000031360.15	ENSMUST00000112301.8	3099	19	8239	122	8239	-122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCTCAAACTCACAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	161693104	161815199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUSG00000031360.15_161696202_161815323_1	chrX	+	2682	16	ISM	ENSMUSG00000031360.15	ENSMUST00000112301.8	3099	19	11336	-2	11336	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCAGTGTCATTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	161696201	161815323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUSG00000031367.16_162692141_162716357_1	chrX	+	1778	5	NNC	ENSMUSG00000031367.16	novel	1785	5	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGGTGTGCTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	162692140	162716357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_162692270_162694330_162694504_162699470_162699580_162700701_162700840_162715128
ENSMUSG00000031367.16_162694397_162711745_1	chrX	+	1078	4	ISM	ENSMUSG00000031367.16	ENST00000450644.2	1707	5	72	693	72	-693	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGAGTCAGTAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	162694396	162711745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_162694504_162699470_162699580_162700701_162700840_162711021
ENSMUSG00000031367.16_162694397_162711818_1	chrX	+	1151	4	ISM	ENSMUSG00000031367.16	ENST00000450644.2	1707	5	72	620	72	-620	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATACTTATTAGTTAATGG	NA	NA	NA	NA	NA	NA	NA	NA	162694396	162711818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_162694504_162699470_162699580_162700701_162700840_162711021
ENSMUSG00000031367.16_162699515_162711925_1	chrX	+	1107	3	ISM	ENSMUSG00000031367.16	ENST00000450644.2	1707	5	5190	513	5190	-513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATTAATTTTATAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	162699514	162711925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_162699580_162700701_162700840_162711021
ENSMUSG00000031367.16_162699552_162711993_1	chrX	+	1138	3	ISM	ENSMUSG00000031367.16	ENST00000450644.2	1707	5	5227	445	5227	-445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGTCTATCTAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	162699551	162711993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_162699580_162700701_162700840_162711021
ENSMUSG00000031367.16_162700798_162712241_1	chrX	+	1126	3	ISM	ENSMUSG00000031367.16	ENST00000450644.2	1707	5	6473	197	6473	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAGTGTTAGGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	162700797	162712241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_162700840_162711021_162712044_162712179
ENSMUSG00000031367.16_162711083_162712333_1	chrX	+	1115	2	ISM	ENSMUSG00000031367.16	ENST00000450644.2	1707	5	16758	105	16758	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCACACTACATGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	162711082	162712333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_162712044_162712179
ENSMUSG00000031367.16_162711142_162712385_1	chrX	+	1108	2	ISM	ENSMUSG00000031367.16	ENST00000450644.2	1707	5	16817	53	16817	-53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCATGCCTGTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	162711141	162712385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_162712044_162712179
ENSMUSG00000031367.16_162711195_162712438_1	chrX	+	1108	2	ISM	ENSMUSG00000031367.16	ENST00000450644.2	1707	5	16870	0	16870	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGTGAGGGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	162711194	162712438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_162712044_162712179
ENSMUSG00000031370.13_162719294_162726183_1	chrX	-	759	5	ISM	ENSMUSG00000031370.13	ENST00000307771.8	1267	9	11297	26	11297	-26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATAAACTTGGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	162726183	162719293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_162719364_162719526_162719962_162722301_162722412_162723114_162723171_162726095
ENSMUSG00000031370.13_162719602_162732351_1	chrX	-	836	5	ISM	ENSMUSG00000031370.13	ENST00000307771.8	1267	9	5129	334	5129	-334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGCCAGAGCAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	162732351	162719601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_162719962_162722301_162722412_162723114_162723171_162726095_162726310_162732255
ENSMUSG00000031370.13_162719822_162737435_1	chrX	-	831	8	ISM	ENSMUSG00000031370.13	ENST00000307771.8	1267	9	45	554	45	-554	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAGAGAGGAGGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	162737435	162719821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_162719962_162722301_162722412_162723114_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369
ENSMUSG00000031371.15_72480921_72502650_1	chrX	-	1373	10	NNC	ENSMUSG00000031371.15	novel	1380	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCCTTCGGACTACT	NA	NA	NA	NA	NA	NA	NA	NA	72502650	72480920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_72481172_72489415_72489531_72490533_72490744_72491565_72491663_72491797_72491957_72492416_72492509_72496604_72496667_72498472_72498541_72501586_72501696_72502440
ENSMUSG00000031371.15_72480921_72502650_2	chrX	-	1373	10	NNC	ENSMUSG00000031371.15	novel	1380	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCCTTCGGACTACT	NA	NA	NA	NA	NA	NA	NA	NA	72502650	72480920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_72481165_72489415_72489531_72490533_72490744_72491565_72491663_72491797_72491957_72492416_72492509_72496604_72496667_72498472_72498541_72501579_72501696_72502440
ENSMUSG00000031371.15_72480921_72502650_3	chrX	-	1373	10	NNC	ENSMUSG00000031371.15	novel	1380	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCCTTCGGACTACT	NA	NA	NA	NA	NA	NA	NA	NA	72502650	72480920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_72481172_72489415_72489531_72490533_72490744_72491565_72491663_72491797_72491950_72492416_72492509_72496604_72496667_72498472_72498541_72501579_72501696_72502440
ENSMUSG00000031373.5_162760010_162770155_1	chrX	-	2419	2	ISM	ENSMUSG00000031373.5	ENSMUST00000033739.5	3436	8	40838	192	40838	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGACGGTTCAAGACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	162770155	162760009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_162762367_162770093
ENSMUSG00000031373.5_162760085_162770190_1	chrX	-	2379	2	ISM	ENSMUSG00000031373.5	ENSMUST00000033739.5	3436	8	40803	267	40803	-267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAAGCATCTTTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	162770190	162760084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_162762367_162770093
ENSMUSG00000031373.5_162760143_162770251_1	chrX	-	2382	2	ISM	ENSMUSG00000031373.5	ENSMUST00000033739.5	3436	8	40742	325	40742	-325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGACCTGAGCTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	162770251	162760142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_162762367_162770093
ENSMUSG00000031373.5_162760261_162773469_1	chrX	-	2374	4	ISM	ENSMUSG00000031373.5	ENSMUST00000033739.5	3436	8	37524	443	37524	-443	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTAGTTGCTATTACT	NA	NA	NA	NA	NA	NA	NA	NA	162773469	162760260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_162762367_162770093_162770250_162771345_162771409_162773420
ENSMUSG00000031373.5_162760385_162774429_1	chrX	-	2380	5	ISM	ENSMUSG00000031373.5	ENSMUST00000033739.5	3436	8	36564	567	36564	-567	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGTGGGAGCCCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	162774429	162760384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_162762367_162770093_162770250_162771345_162771409_162773420_162773517_162774346
ENSMUSG00000031373.5_162760590_162783432_1	chrX	-	2409	6	ISM	ENSMUSG00000031373.5	ENSMUST00000033739.5	3436	8	27561	772	27561	-772	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCAGGAGCTGCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	162783432	162760589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_162762367_162770093_162770250_162771345_162771409_162773420_162773517_162774346_162774466_162783234
ENSMUSG00000031373.5_162760797_162797995_1	chrX	-	2399	7	ISM	ENSMUSG00000031373.5	ENSMUST00000033739.5	3436	8	12998	979	12998	-979	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATCTGAAATTGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	162797995	162760796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_162762367_162770093_162770250_162771345_162771409_162773420_162773517_162774346_162774466_162783234_162783433_162797798
ENSMUSG00000031375.18_72527241_72535696_1	chrX	+	636	4	ISM	ENSMUSG00000031375.18	ENSMUST00000169489.2	1574	9	0	3839	0	-3839	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	924	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCATGACAACCGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	72527240	72535696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72527369_72534384_72534637_72534923_72535037_72535553
ENSMUSG00000031375.18_72534443_72536613_1	chrX	+	677	5	ISM	ENSMUSG00000031375.18	ENSMUST00000169489.2	1574	9	7202	2922	7202	-2922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGCTATTGAGTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	72534442	72536613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72534637_72534923_72535037_72535553_72535768_72536328_72536440_72536568
ENSMUSG00000031375.18_72534591_72536916_1	chrX	+	689	6	ISM	ENSMUSG00000031375.18	ENSMUST00000169489.2	1574	9	7350	2619	7350	-2619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTCCCAGATCTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	72534590	72536916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72534637_72534923_72535037_72535553_72535768_72536328_72536440_72536568_72536663_72536805
ENSMUSG00000031375.18_72534999_72538227_1	chrX	+	619	6	ISM	ENSMUSG00000031375.18	ENSMUST00000169489.2	1574	9	7758	1308	7758	-1308	internal_fragment	TRUE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCACCAAGGTGGGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	72534998	72538227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72535037_72535553_72535768_72536328_72536440_72536568_72536663_72536805_72536945_72538204
ENSMUSG00000031375.18_72535554_72538322_1	chrX	+	676	5	ISM	ENSMUSG00000031375.18	ENSMUST00000169489.2	1574	9	8313	1213	8313	-1213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTGGGAAGTGCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	72535553	72538322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72535768_72536328_72536440_72536568_72536663_72536805_72536945_72538204
ENSMUSG00000031375.18_72535663_72538322_1	chrX	+	567	5	ISM	ENSMUSG00000031375.18	ENSMUST00000169489.2	1574	9	8422	1213	8422	-1213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTGGGAAGTGCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	72535662	72538322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72535768_72536328_72536440_72536568_72536663_72536805_72536945_72538204
ENSMUSG00000031375.18_72535663_72538436_1	chrX	+	681	5	ISM	ENSMUSG00000031375.18	ENSMUST00000169489.2	1574	9	8422	1099	8422	-1099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1570	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTCTGAGGAACATAGCC	NA	NA	NA	NA	NA	NA	NA	NA	72535662	72538436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72535768_72536328_72536440_72536568_72536663_72536805_72536945_72538204
ENSMUSG00000031375.18_72536603_72538608_1	chrX	+	603	3	ISM	ENSMUSG00000031375.18	ENSMUST00000169489.2	1574	9	9362	927	9362	-927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGAGACTCCCTATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	72536602	72538608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72536663_72536805_72536945_72538204
ENSMUSG00000031375.18_72536831_72538719_1	chrX	+	629	2	ISM	ENSMUSG00000031375.18	ENSMUST00000169489.2	1574	9	9590	816	9590	-816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCATGTGTTCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	72536830	72538719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72536945_72538204
ENSMUSG00000031375.18_72536867_72538784_1	chrX	+	658	2	ISM	ENSMUSG00000031375.18	ENSMUST00000169489.2	1574	9	9626	751	9626	-751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTTATCCTCTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	72536866	72538784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72536945_72538204
ENSMUSG00000031376.16_72566532_72579822_1	chrX	+	1195	7	ISM	ENSMUSG00000031376.16	ENST00000393842.5	3758	19	91	23985	91	-21998	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGAGTGCACACCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	72566531	72579822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72566769_72572250_72572449_72572547_72572806_72573231_72573358_72573902_72574029_72578961_72579127_72579737
ENSMUSG00000031376.16_72566613_72579896_1	chrX	+	1188	7	ISM	ENSMUSG00000031376.16	ENST00000393842.5	3758	19	172	23911	172	-21924	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCCTGAGGGCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	72566612	72579896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72566769_72572250_72572449_72572547_72572806_72573231_72573358_72573902_72574029_72578961_72579127_72579737
ENSMUSG00000031376.16_72572299_72580621_1	chrX	+	1171	7	ISM	ENSMUSG00000031376.16	ENST00000393842.5	3758	19	5858	23186	5858	-21199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGACACCCACTACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	72572298	72580621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72572449_72572547_72572806_72573231_72573358_72573902_72574029_72578961_72579127_72579737_72579953_72580490
ENSMUSG00000031376.16_72572349_72580696_1	chrX	+	1196	7	ISM	ENSMUSG00000031376.16	ENST00000393842.5	3758	19	5908	23111	5908	-21124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCCATCAACAGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	72572348	72580696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72572449_72572547_72572806_72573231_72573358_72573902_72574029_72578961_72579127_72579737_72579953_72580490
ENSMUSG00000031376.16_72572612_72581804_1	chrX	+	1192	7	ISM	ENSMUSG00000031376.16	ENST00000393842.5	3758	19	6171	22003	6171	-20016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTTTACAAAGTGTACAC	NA	NA	NA	NA	NA	NA	NA	NA	72572611	72581804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72572806_72573231_72573358_72573902_72574029_72578961_72579127_72579737_72579953_72580490_72580734_72581681
ENSMUSG00000031376.16_72572714_72581921_1	chrX	+	1207	7	ISM	ENSMUSG00000031376.16	ENST00000393842.5	3758	19	6273	21886	6273	-19899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGAGTGTGTAATAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	72572713	72581921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72572806_72573231_72573358_72573902_72574029_72578961_72579127_72579737_72579953_72580490_72580734_72581681
ENSMUSG00000031376.16_72573314_72585926_1	chrX	+	1170	7	ISM	ENSMUSG00000031376.16	ENST00000393842.5	3758	19	6873	17881	6873	-15894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTATCCAGGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	72573313	72585926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72573358_72573902_72574029_72578961_72579127_72579737_72579953_72580490_72580734_72581681_72581924_72585791
ENSMUSG00000031376.16_72579020_72588809_1	chrX	+	1183	6	ISM	ENSMUSG00000031376.16	ENST00000393842.5	3758	19	12579	14998	12579	-13011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAATTCAACAGAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	72579019	72588809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72579127_72579737_72579953_72580490_72580734_72581681_72581924_72585791_72586027_72588668
ENSMUSG00000031376.16_72580519_72591371_1	chrX	+	1190	7	ISM	ENSMUSG00000031376.16	ENST00000393842.5	3758	19	14078	12436	14078	-10449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGTTTCAGTTGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	72580518	72591371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72580734_72581681_72581924_72585791_72586027_72588668_72588849_72588970_72589059_72590065_72590173_72591248
ENSMUSG00000031376.16_72580681_72594630_1	chrX	+	1170	8	ISM	ENSMUSG00000031376.16	ENST00000393842.5	3758	19	14240	9177	14240	-7190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACGGAACCCCCAACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	72580680	72594630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72580734_72581681_72581924_72585791_72586027_72588668_72588849_72588970_72589059_72590065_72590173_72591248_72591441_72594557
ENSMUSG00000031376.16_72581809_72595124_1	chrX	+	1196	8	ISM	ENSMUSG00000031376.16	ENST00000393842.5	3758	19	15368	8683	15368	-6696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCATCATCTTCAACAC	NA	NA	NA	NA	NA	NA	NA	NA	72581808	72595124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72581924_72585791_72586027_72588668_72588849_72588970_72589059_72590065_72590173_72591248_72591441_72594557_72594772_72595059
ENSMUSG00000031376.16_72585911_72596482_1	chrX	+	1186	8	ISM	ENSMUSG00000031376.16	ENST00000393842.5	3758	19	19470	7325	19470	-5338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTTGGGGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	72585910	72596482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72586027_72588668_72588849_72588970_72589059_72590065_72590173_72591248_72591441_72594557_72594772_72595059_72595272_72596405
ENSMUSG00000031376.16_72588667_72598750_1	chrX	+	1195	8	ISM	ENSMUSG00000031376.16	ENST00000393842.5	3758	19	22226	5057	22226	-3070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAAGGGGAAGAAGAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	72588666	72598750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72588849_72588970_72589059_72590065_72590173_72591248_72591441_72594557_72594772_72595059_72595272_72596405_72596514_72598658
ENSMUSG00000031376.16_72588747_72598797_1	chrX	+	1162	8	ISM	ENSMUSG00000031376.16	ENST00000393842.5	3758	19	22306	5010	22306	-3023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGATCCTCTGGTTTCGG	NA	NA	NA	NA	NA	NA	NA	NA	72588746	72598797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72588849_72588970_72589059_72590065_72590173_72591248_72591441_72594557_72594772_72595059_72595272_72596405_72596514_72598658
ENSMUSG00000031376.16_72591298_72603782_1	chrX	+	1173	6	ISM	ENSMUSG00000031376.16	ENST00000393842.5	3758	19	24857	25	24857	-25	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAGCCATATTCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	72591297	72603782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_72591441_72594557_72594772_72595059_72595272_72596405_72596514_72598658_72598842_72603469
ENSMUSG00000031379.14_163052507_163155781_1	chrX	+	1293	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	80	226	80	-226	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTTTTTTTGTAATGA	NA	NA	NA	NA	NA	NA	NA	NA	163052506	163155781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ENSMUSG00000031379.14_163052507_163155847_1	chrX	+	1359	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	80	160	80	-160	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTTAATTTAAAAAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	163052506	163155847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ENSMUSG00000031379.14_163052543_163155901_1	chrX	+	1377	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	116	106	116	-106	multi-exon	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTTCCTGATACATG	NA	NA	NA	NA	NA	NA	NA	NA	163052542	163155901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ENSMUSG00000031379.14_163052569_163155895_1	chrX	+	1345	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	142	112	142	-112	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTAAAATATTTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	163052568	163155895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ENSMUSG00000031379.14_163052569_163156007_1	chrX	+	1457	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	142	0	142	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTGCTTTTTTATATG	NA	NA	NA	NA	NA	NA	NA	NA	163052568	163156007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ENSMUSG00000031379.14_163054599_163156007_1	chrX	+	1352	9	ISM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	2172	0	2172	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTGCTTTTTTATATG	NA	NA	NA	NA	NA	NA	NA	NA	163054598	163156007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ENSMUSG00000031380.11_163156677_163177491_1	chrX	+	704	4	ISM	ENSMUSG00000031380.11	ENST00000297904.4	1625	7	339	7710	303	-7710	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACGGGTTGTAAGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	163156676	163177491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_163156916_163168814_163169026_163174597_163174789_163177428
ENSMUSG00000031380.11_163156831_163178990_1	chrX	+	698	5	ISM	ENSMUSG00000031380.11	ENST00000297904.4	1625	7	493	6211	457	-6211	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTGCAAGACGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	163156830	163178990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_163156916_163168814_163169026_163174597_163174789_163177428_163177578_163178928
ENSMUSG00000031380.11_163156899_163179028_1	chrX	+	668	5	ISM	ENSMUSG00000031380.11	ENST00000297904.4	1625	7	561	6173	525	-6173	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGGATGGCAGTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	163156898	163179028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_163156916_163168814_163169026_163174597_163174789_163177428_163177578_163178928
ENSMUSG00000031380.11_163168920_163183854_1	chrX	+	743	5	ISM	ENSMUSG00000031380.11	ENST00000297904.4	1625	7	12582	1347	12546	-1347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAATGGTCTTTTCGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	163168919	163183854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_163169026_163174597_163174789_163177428_163177578_163178928_163179030_163183658
ENSMUSG00000031380.11_163168991_163185057_1	chrX	+	727	6	ISM	ENSMUSG00000031380.11	ENST00000297904.4	1625	7	12653	144	12617	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAAAGCACTGGCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	163168990	163185057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_163169026_163174597_163174789_163177428_163177578_163178928_163179030_163183658_163183855_163185002
ENSMUSG00000031380.11_163174596_163185033_1	chrX	+	670	5	ISM	ENSMUSG00000031380.11	ENST00000297904.4	1625	7	18258	168	18222	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTGCAAGTAGAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	163174595	163185033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_163174789_163177428_163177578_163178928_163179030_163183658_163183855_163185002
ENSMUSG00000031380.11_163174642_163185093_1	chrX	+	684	5	ISM	ENSMUSG00000031380.11	ENST00000297904.4	1625	7	18304	108	18268	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGGGACTCTACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	163174641	163185093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_163174789_163177428_163177578_163178928_163179030_163183658_163183855_163185002
ENSMUSG00000031380.11_163174695_163185146_1	chrX	+	684	5	ISM	ENSMUSG00000031380.11	ENST00000297904.4	1625	7	18357	55	18321	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATCTCTGTCATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	163174694	163185146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_163174789_163177428_163177578_163178928_163179030_163183658_163183855_163185002
ENSMUSG00000031382.15_163219990_163241821_1	chrX	+	1049	7	FSM	ENSMUSG00000031382.15	ENST00000380470.7	1189	7	-43	183	0	-183	multi-exon	FALSE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACTCACCCAATTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	163219989	163241821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_163220222_163228724_163228805_163233501_163233559_163235894_163236046_163237383_163237519_163238792_163238985_163241619
ENSMUSG00000031382.15_163220006_163241821_1	chrX	+	1028	7	NNC	ENSMUSG00000031382.15	novel	1189	7	NA	NA	16	-183	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACTCACCCAATTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	163220005	163241821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_163220217_163228724_163228805_163233501_163233559_163235894_163236046_163237383_163237519_163238792_163238985_163241619
ENSMUSG00000031382.15_163220006_163241821_2	chrX	+	1033	7	FSM	ENSMUSG00000031382.15	ENST00000380470.7	1189	7	-27	183	16	-183	multi-exon	FALSE	canonical	NA	NA	NA	NA	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACTCACCCAATTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	163220005	163241821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_163220222_163228724_163228805_163233501_163233559_163235894_163236046_163237383_163237519_163238792_163238985_163241619
ENSMUSG00000031382.15_163228721_163242004_1	chrX	+	1004	6	ISM	ENSMUSG00000031382.15	ENST00000380470.7	1189	7	8688	0	7667	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCATTTCCTGGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	163228720	163242004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_163228805_163233501_163233559_163235894_163236046_163237383_163237519_163238792_163238985_163241619
ENSMUSG00000031382.15_163228721_163242004_2	chrX	+	997	6	NNC	ENSMUSG00000031382.15	novel	1189	7	NA	NA	7667	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCATTTCCTGGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	163228720	163242004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_163228805_163233501_163233559_163235894_163236046_163237390_163237519_163238792_163238985_163241619
ENSMUSG00000031387.15_72965745_72974076_1	chrX	-	1216	10	ISM	ENSMUSG00000031387.15	ENSMUST00000155597.2	1310	11	286	0	286	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	935	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGACCCTGTTCCACATG	NA	NA	NA	NA	NA	NA	NA	NA	72974076	72965744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013
ENSMUSG00000031387.15_72965956_72974123_1	chrX	-	1097	9	ISM	ENSMUSG00000031387.15	ENSMUST00000114379.8	1318	11	275	229	239	-211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCGAGGAACGGGGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	72974123	72965955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973834_72973869_72974013
ENSMUSG00000031387.15_72965956_72974347_1	chrX	-	1167	10	ISM	ENSMUSG00000031387.15	ENSMUST00000116578.8	1418	11	109	229	15	-211	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCGAGGAACGGGGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	72974347	72965955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
ENSMUSG00000031387.15_72969873_72974456_1	chrX	-	1136	9	ISM	ENSMUSG00000031387.15	ENSMUST00000116578.8	1418	11	0	4146	0	-4128	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTTGCTGCATCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72974456	72969872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
ENSMUSG00000031388.15_72960698_72965438_1	chrX	-	722	8	FSM	ENSMUSG00000031388.15	ENSMUST00000114389.10	1031	8	92	217	0	-172	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGTCGTGAGGAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	72965438	72960697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_72960893_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ENSMUSG00000031388.15_72960832_72964900_1	chrX	-	435	7	ISM	ENSMUSG00000031388.15	ENSMUST00000114389.10	1031	8	630	351	534	248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGCTTCCCTCTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	72964900	72960831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_72960893_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877
ENSMUSG00000031390.9_72936960_72937387_1	chrX	+	357	2	FSM	ENSMUSG00000031390.9	ENST00000370049.1	1157	2	728	72	728	-72	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTCAGAGGCACACCAC	NA	NA	NA	NA	NA	NA	NA	NA	72936959	72937387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_72937204_72937274
ENSMUSG00000031390.9_72937031_72937430_1	chrX	+	329	2	FSM	ENSMUSG00000031390.9	ENST00000370049.1	1157	2	799	29	799	-29	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTGTGCCACAGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	72937030	72937430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_72937204_72937274
ENSMUSG00000031390.9_72937105_72937460_1	chrX	+	285	2	FSM	ENSMUSG00000031390.9	ENST00000370049.1	1157	2	873	-1	873	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGATACACCCTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	72937104	72937460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_72937204_72937274
ENSMUSG00000031399.16_73428490_73430047_1	chrX	-	572	2	ISM	ENSMUSG00000031399.16	ENSMUST00000015427.13	1427	10	6562	123	6293	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGCAAGCCTGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	73430047	73428489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73429042_73430027
ENSMUSG00000031399.16_73428651_73430310_1	chrX	-	591	3	ISM	ENSMUSG00000031399.16	ENST00000322269.10	811	8	6030	-292	6030	159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCCCCAGAGGCAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	73430310	73428650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73429042_73430027_73430155_73430237
ENSMUSG00000031399.16_73428908_73434632_2	chrX	-	708	7	ISM	ENSMUSG00000031399.16	ENST00000322269.10	811	8	1708	-35	1708	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCACCAGTGTCAGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	73434632	73428907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431444_73434590
ENSMUSG00000031399.16_73430028_73436293_2	chrX	-	665	7	ISM	ENSMUSG00000031399.16	ENST00000322269.10	811	8	47	1085	47	-1085	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGCAGAGAACCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	73436293	73430027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431444_73434590_73434711_73436280
ENSMUSG00000031399.16_73430238_73436420_1	chrX	-	597	7	ISM	ENSMUSG00000031399.16	ENSMUST00000015427.13	1427	10	189	1871	-80	-1295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGACTGCCAAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	73436420	73430237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280
ENSMUSG00000031399.16_73431233_73436609_1	chrX	-	592	4	ISM	ENSMUSG00000031399.16	ENSMUST00000114141.8	1243	10	179	2423	0	-2290	intron_retention	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATATGGGCTGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	73436609	73431232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73431358_73434079_73434104_73434596_73434711_73436280
ENSMUSG00000031399.16_73434596_73436788_1	chrX	-	623	2	ISM	ENSMUSG00000031399.16	ENSMUST00000114141.8	1243	10	0	5786	0	-5653	intron_retention	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGGGAATCCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	73436788	73434595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73434711_73436280
ENSMUSG00000031400.11_73453089_73454898_1	chrX	-	1256	5	ISM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	17902	0	17902	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTTGTTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	73454898	73453088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863
ENSMUSG00000031400.11_73453207_73454967_1	chrX	-	1207	5	ISM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	17833	118	17833	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTCCATGGTCAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	73454967	73453206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863
ENSMUSG00000031400.11_73453339_73455190_1	chrX	-	1178	6	ISM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	17610	250	17610	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTATGTGAGAGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	73455190	73453338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170
ENSMUSG00000031400.11_73453447_73455595_1	chrX	-	1168	7	ISM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	17205	358	17205	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAGGAACAATGGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	73455595	73453446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571
ENSMUSG00000031400.11_73453493_73455655_1	chrX	-	1182	7	ISM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	17145	404	17145	-404	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTGCAGAAAGAATGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	73455655	73453492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571
ENSMUSG00000031400.11_73453602_73455984_1	chrX	-	1175	8	ISM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	16816	513	16816	-513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCTCAAATACCAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	73455984	73453601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924
ENSMUSG00000031400.11_73453725_73457503_1	chrX	-	1185	9	ISM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	15297	636	15297	-636	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGACCCCATATTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	73457503	73453724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469
ENSMUSG00000031400.11_73453782_73457553_1	chrX	-	1178	9	ISM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	15247	693	15247	-693	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGGCCACCCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	73457553	73453781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469
ENSMUSG00000031400.11_73453822_73457622_1	chrX	-	1207	9	ISM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	15178	733	15178	-733	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCTGAGCCCTGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	73457622	73453821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469
ENSMUSG00000031400.11_73454071_73458586_1	chrX	-	1195	9	ISM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	14214	982	14214	-982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCACACCACTGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	73458586	73454070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513
ENSMUSG00000031400.11_73454189_73458759_1	chrX	-	1244	9	ISM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	14041	1100	14041	-1100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGGACCCCCAGCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	73458759	73454188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721
ENSMUSG00000031400.11_73454906_73472585_1	chrX	-	1177	9	NNC	ENSMUSG00000031400.11	novel	2652	13	NA	NA	215	-1817	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGCAGCTGTCCTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	73472585	73454905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_73455051_73455170_73455265_73455571_73455698_73455924_73456087_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
ENSMUSG00000031400.11_73454953_73472640_1	chrX	-	1183	8	NNC	ENSMUSG00000031400.11	novel	2652	13	NA	NA	160	-1864	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTAGATGACCCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	73472640	73454952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_73455051_73455170_73455265_73455571_73455698_73455924_73456087_73457469_73457688_73458513_73458655_73471653_73471786_73472428
ENSMUSG00000031400.11_73455169_73472800_1	chrX	-	1249	8	NNC	ENSMUSG00000031400.11	novel	2652	13	NA	NA	0	-2080	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGAGGCATGTCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	73472800	73455168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_73455265_73455571_73455698_73455924_73456087_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
ENSMUSG00000031402.13_74153339_74174622_1	chrX	-	2519	12	NNC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCCAGTCCAAGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	74174622	74153338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_74154450_74155532_74155608_74155804_74156008_74157191_74157273_74157839_74157921_74159667_74159769_74161361_74161559_74165040_74165110_74167501_74167588_74168976_74169056_74169342_74169487_74174330
ENSMUSG00000031402.13_74153339_74174622_2	chrX	-	2518	12	NNC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCCAGTCCAAGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	74174622	74153338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_74154450_74155532_74155608_74155804_74156008_74157191_74157266_74157839_74157921_74159661_74159769_74161361_74161559_74165040_74165110_74167501_74167588_74168976_74169056_74169342_74169487_74174330
ENSMUSG00000031402.13_74153339_74174622_3	chrX	-	2518	12	NNC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCCAGTCCAAGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	74174622	74153338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_74154443_74155532_74155608_74155804_74156008_74157191_74157273_74157839_74157921_74159661_74159769_74161361_74161559_74165040_74165110_74167501_74167588_74168976_74169056_74169342_74169487_74174330
ENSMUSG00000031403.15_74139659_74142403_1	chrX	+	357	5	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	199	10980	199	-10155	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTCCCATGAGGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	74139658	74142403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368
ENSMUSG00000031403.15_74140438_74151911_1	chrX	+	1282	11	NNC	ENSMUSG00000031403.15	novel	1550	13	NA	NA	0	-647	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGAACCATGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	74140437	74151911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149393_74151784
ENSMUSG00000031403.15_74140490_74152315_1	chrX	+	1255	13	FSM	ENSMUSG00000031403.15	ENST00000620277.4	1550	13	52	243	52	-243	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAGAAAAAGAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	74140489	74152315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149910_74151784_74151911_74152301
ENSMUSG00000031403.15_74140920_74152383_1	chrX	+	1262	11	NNC	ENSMUSG00000031403.15	novel	1550	13	NA	NA	482	-175	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTATGTCCAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	74140919	74152383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149393_74151784_74151911_74152301
ENSMUSG00000031403.15_74140949_74152455_1	chrX	+	1317	12	ISM	ENSMUSG00000031403.15	ENST00000620277.4	1550	13	511	103	511	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGAGTAGAAAGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	74140948	74152455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149910_74151784_74151911_74152301
ENSMUSG00000031403.15_74142111_74152475_1	chrX	+	1248	10	NNC	ENSMUSG00000031403.15	novel	1550	13	NA	NA	1673	-83	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACTTTTAGCTGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	74142110	74152475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149386_74151784_74151911_74152301
ENSMUSG00000031403.15_74142143_74152505_1	chrX	+	1253	10	NNC	ENSMUSG00000031403.15	novel	1550	13	NA	NA	1705	-53	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTAGCTGGTGTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	74142142	74152505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149393_74151784_74151911_74152301
ENSMUSG00000031403.15_74142367_74152559_1	chrX	+	1304	10	ISM	ENSMUSG00000031403.15	ENST00000620277.4	1550	13	1929	-1	1929	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATAAAATCAGGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	74142366	74152559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149910_74151784_74151911_74152301
ENSMUSG00000031403.15_74142477_74152559_1	chrX	+	1193	10	NNC	ENSMUSG00000031403.15	novel	1550	13	NA	NA	2039	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATAAAATCAGGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	74142476	74152559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149909_74151784_74151911_74152301
ENSMUSG00000031403.15_74146094_74149949_1	chrX	+	384	4	ISM	ENSMUSG00000031403.15	ENST00000620277.4	1550	13	5656	2609	5656	-2609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCTGCCACATGGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	74146093	74149949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_74146172_74147945_74148067_74149259_74149379_74149883
ENSMUSG00000031403.15_74148029_74151849_1	chrX	+	405	5	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	8569	1534	7591	-709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGGATAAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	74148028	74151849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784
ENSMUSG00000031403.15_74149913_74152390_1	chrX	+	369	4	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	10453	993	9475	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCCAGCTGGGAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	74149912	74152390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUSG00000031403.15_74149951_74152461_1	chrX	+	402	4	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	10491	922	9513	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGAAAGTTCTGGTATAC	NA	NA	NA	NA	NA	NA	NA	NA	74149950	74152461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUSG00000031403.15_74151822_74152601_1	chrX	+	389	2	ISM	ENSMUSG00000031403.15	ENST00000620277.4	1550	13	11384	-43	11384	43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGCCACACCTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	74151821	74152601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_74151911_74152301
ENSMUSG00000031403.15_74151875_74152649_1	chrX	+	384	2	ISM	ENSMUSG00000031403.15	ENST00000620277.4	1550	13	11437	-91	11437	91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTACTAATGAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	74151874	74152649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_74151911_74152301
ENSMUSG00000031422.17_135633691_135642101_1	chrX	-	1863	4	NNC	ENSMUSG00000031422.17	novel	1859	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	135642101	135633690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_135635251_135636294_135636372_135640553_135640644_135641965
ENSMUSG00000031429.15_139849920_139854634_1	chrX	-	531	4	NNC	ENSMUSG00000031429.15	novel	547	4	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1920	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGCAGAAAGTGAAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	139854634	139849919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_139850051_139852895_139853063_139853153_139853297_139854544
ENSMUSG00000031429.15_139849920_139854634_2	chrX	-	539	4	ISM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	2804	742	8	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGCAGAAAGTGAAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	139854634	139849919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_139850059_139852895_139853063_139853153_139853301_139854548
ENSMUSG00000031430.9_139808357_139833875_1	chrX	+	863	6	NNC	ENSMUSG00000031430.9	novel	943	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGACCATATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	139808356	139833875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_139808476_139816933_139817101_139820262_139820371_139827071_139827271_139833213_139833364_139833755
ENSMUSG00000031430.9_139808357_139833875_2	chrX	+	869	6	FSM	ENSMUSG00000031430.9	ENST00000415430.7	943	6	74	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGACCATATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	139808356	139833875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_139808476_139816933_139817101_139820262_139820371_139827071_139827271_139833213_139833370_139833755
ENSMUSG00000031430.9_139808357_139833875_3	chrX	+	862	6	NNC	ENSMUSG00000031430.9	novel	943	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1728	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGACCATATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	139808356	139833875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_139808476_139816933_139817101_139820262_139820371_139827071_139827264_139833213_139833370_139833755
ENSMUSG00000031430.9_139808357_139833875_4	chrX	+	864	6	NNC	ENSMUSG00000031430.9	novel	943	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1728	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGACCATATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	139808356	139833875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_139808476_139816938_139817101_139820262_139820371_139827071_139827271_139833213_139833370_139833755
ENSMUSG00000031431.14_139441234_139442908_1	chrX	-	678	2	ISM	ENSMUSG00000031431.14	ENSMUST00000055738.12	1974	3	1028	957	1028	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCACCTGACAATGACTG	NA	NA	NA	NA	NA	NA	NA	NA	139442908	139441233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_139441857_139442853
ENSMUSG00000031431.14_139441523_139443886_1	chrX	-	678	3	FSM	ENSMUSG00000031431.14	ENSMUST00000055738.12	1974	3	50	1246	50	-423	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTACACCTAACATAGC	NA	NA	NA	NA	NA	NA	NA	NA	139443886	139441522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_139441857_139442853_139442906_139443594
ENSMUSG00000031432.4_139357362_139376053_1	chrX	+	1129	7	FSM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	0	836	0	-345	multi-exon	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCTTGGTATTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	139357361	139376053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
ENSMUSG00000031432.4_139357362_139376737_1	chrX	+	1191	7	FSM	ENSMUSG00000031432.4	ENST00000643795.2	1318	7	23	104	0	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTCTGAGGTGGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	139357361	139376737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374628_139376479
ENSMUSG00000031432.4_139357529_139376117_1	chrX	+	1026	7	FSM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	167	772	167	-281	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACATTAGCTATATTACC	NA	NA	NA	NA	NA	NA	NA	NA	139357528	139376117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
ENSMUSG00000031432.4_139357567_139376737_1	chrX	+	986	7	FSM	ENSMUSG00000031432.4	ENST00000643795.2	1318	7	228	104	205	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTCTGAGGTGGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	139357566	139376737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374628_139376479
ENSMUSG00000031432.4_139357567_139376889_1	chrX	+	1138	7	FSM	ENSMUSG00000031432.4	ENST00000643795.2	1318	7	228	-48	205	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	139357566	139376889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374628_139376479
ENSMUSG00000031432.4_139357575_139376172_1	chrX	+	1035	7	FSM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	213	717	213	-226	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCTAGGATGTTCAACC	NA	NA	NA	NA	NA	NA	NA	NA	139357574	139376172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
ENSMUSG00000031432.4_139366067_139369673_1	chrX	+	187	2	ISM	ENSMUSG00000031432.4	ENST00000372418.4	1385	6	8715	6725	8705	-6725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTGTCTCACCTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	139366066	139369673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139366164_139369583
ENSMUSG00000031432.4_139366084_139376327_1	chrX	+	1048	6	ISM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	8722	562	8722	-71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCATTGCATGTGAACGC	NA	NA	NA	NA	NA	NA	NA	NA	139366083	139376327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
ENSMUSG00000031432.4_139368467_139376433_1	chrX	+	1028	5	ISM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	11105	456	11105	35	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCCTTAAACATAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	139368466	139376433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
ENSMUSG00000031432.4_139368496_139376506_1	chrX	+	1072	5	ISM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	11134	383	11134	108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGCCTGATCCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	139368495	139376506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
ENSMUSG00000031432.4_139369685_139376617_1	chrX	+	1058	4	ISM	ENSMUSG00000031432.4	ENST00000372418.4	1385	6	12333	-219	12323	219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTTGGACTCAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	139369684	139376617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139369709_139372745_139372920_139374527_139374688_139375917
ENSMUSG00000031432.4_139372860_139376735_1	chrX	+	1038	3	ISM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	15498	154	15498	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACCTCTGAGGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	139372859	139376735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139372920_139374527_139374688_139375917
ENSMUSG00000031432.4_139374532_139376889_1	chrX	+	1128	2	ISM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	17170	0	17170	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	139374531	139376889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139374688_139375917
ENSMUSG00000031432.4_139374605_139376889_1	chrX	+	1055	2	ISM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	17243	0	17243	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	139374604	139376889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_139374688_139375917
ENSMUSG00000031438.12_138511369_138566289_1	chrX	+	1339	6	ISM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	0	7605	0	-7598	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCACAGTACTGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	138511368	138566289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_138512039_138543034_138543283_138559564_138559637_138564334_138564418_138565236_138565334_138566120
ENSMUSG00000031438.12_138511535_138572538_1	chrX	+	1228	7	FSM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	166	1356	166	-1349	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCATGTTGACAACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	138511534	138572538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_138512039_138543034_138543283_138559564_138559637_138564334_138564418_138565236_138565334_138566120_138566290_138572483
ENSMUSG00000031438.12_138511664_138572664_1	chrX	+	1225	7	FSM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	295	1230	295	-1223	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATCAGGGCCTAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	138511663	138572664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_138512039_138543034_138543283_138559564_138559637_138564334_138564418_138565236_138565334_138566120_138566290_138572483
ENSMUSG00000031438.12_138511710_138572748_1	chrX	+	1263	7	FSM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	341	1146	341	-1139	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTATAGTTAAATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	138511709	138572748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_138512039_138543034_138543283_138559564_138559637_138564334_138564418_138565236_138565334_138566120_138566290_138572483
ENSMUSG00000031438.12_138543035_138573026_1	chrX	+	1212	6	ISM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	31666	868	31666	-861	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTCCAGGTGCTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	138543034	138573026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_138543283_138559564_138559637_138564334_138564418_138565236_138565334_138566120_138566290_138572483
ENSMUSG00000031438.12_138543084_138573090_1	chrX	+	1227	6	ISM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	31715	804	31715	-797	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAACTTAGGCATTAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	138543083	138573090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_138543283_138559564_138559637_138564334_138564418_138565236_138565334_138566120_138566290_138572483
ENSMUSG00000031438.12_138543140_138573144_1	chrX	+	1225	6	ISM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	31771	750	31771	-743	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTTCATTTTAAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	138543139	138573144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_138543283_138559564_138559637_138564334_138564418_138565236_138565334_138566120_138566290_138572483
ENSMUSG00000031438.12_138559593_138573315_1	chrX	+	1225	5	ISM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	48224	579	48224	-572	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCAAAAGCACAGGATAG	NA	NA	NA	NA	NA	NA	NA	NA	138559592	138573315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_138559637_138564334_138564418_138565236_138565334_138566120_138566290_138572483
ENSMUSG00000031438.12_138565254_138573514_1	chrX	+	1280	3	ISM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	53885	380	53885	-373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACATGAAATTTAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	138565253	138573514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_138565334_138566120_138566290_138572483
ENSMUSG00000031438.12_138566264_138573701_1	chrX	+	1244	2	ISM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	54895	193	54895	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCCCAGTGCAAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	138566263	138573701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_138566290_138572483
ENSMUSG00000031446.15_13155621_13173959_1	chr8	+	900	7	FSM	ENSMUSG00000031446.15	ENSMUST00000121426.2	1044	7	-119	263	0	-263	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTGTGCGGCCGACTG	NA	NA	NA	NA	NA	NA	NA	NA	13155620	13173959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_13155904_13156193_13156310_13165469_13165574_13171676_13171747_13172806_13172881_13173466_13173630_13173869
ENSMUSG00000031446.15_13155740_13177742_1	chr8	+	897	9	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	119	20198	0	3520	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGGAGAACATTTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	13155739	13177742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13155904_13156193_13156310_13165469_13165574_13171676_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709
ENSMUSG00000031446.15_13156192_13183241_1	chr8	+	889	9	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	571	14699	452	9019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACGCATGCTGGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	13156191	13183241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13156310_13165469_13165574_13171676_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122
ENSMUSG00000031446.15_13165468_13183698_1	chr8	+	823	9	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	9847	14242	9728	9476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGACCTGCTGGACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	13165467	13183698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13165574_13171676_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648
ENSMUSG00000031446.15_13171677_13183803_1	chr8	+	822	8	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	16056	14137	15937	9581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATCAACAAGAGACCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	13171676	13183803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648
ENSMUSG00000031446.15_13172806_13185969_1	chr8	+	896	8	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	17185	11971	17066	11747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGAAGGAGGGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	13172805	13185969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864
ENSMUSG00000031446.15_13173525_13186216_1	chr8	+	847	8	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	17904	11724	17785	-11724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCATGCTGTCGAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	13173524	13186216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132
ENSMUSG00000031446.15_13173940_13186840_1	chr8	+	830	9	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	18319	11100	18200	-11100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATACTCACCATGGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	13173939	13186840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795
ENSMUSG00000031446.15_13177735_13190259_1	chr8	+	822	8	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	22114	7681	21995	-7681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGCAATGGCAGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	13177734	13190259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202
ENSMUSG00000031446.15_13183665_13192999_1	chr8	+	845	8	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	28044	4941	27925	-4941	internal_fragment	TRUE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTAAAGCACGGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	13183664	13192999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961
ENSMUSG00000031446.15_13183728_13193048_1	chr8	+	831	8	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	28107	4892	27988	-4892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGGAGATAAGTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	13183727	13193048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961
ENSMUSG00000031446.15_13185900_13194356_1	chr8	+	848	8	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	30279	3584	30160	-3584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGAGGAAGACACTTG	NA	NA	NA	NA	NA	NA	NA	NA	13185899	13194356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276
ENSMUSG00000031446.15_13186216_13196619_1	chr8	+	856	8	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	30595	1321	30476	-1321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATGACGCACCAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	13186215	13196619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ENSMUSG00000031446.15_13190307_13196906_1	chr8	+	817	5	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	34686	1034	34567	-1034	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGGGCTTGGTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	13190306	13196906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ENSMUSG00000031446.15_13192581_13197014_1	chr8	+	827	4	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	36960	926	36841	-926	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGCACTGGGGAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	13192580	13197014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13192599_13192961_13193135_13194276_13194430_13196531
ENSMUSG00000031446.15_13193042_13197115_1	chr8	+	830	3	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	37421	825	37302	-825	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTAAATCAGGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	13193041	13197115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13193135_13194276_13194430_13196531
ENSMUSG00000031446.15_13193110_13197172_1	chr8	+	819	3	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	37489	768	37370	-768	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGAGACACAGCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	13193109	13197172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13193135_13194276_13194430_13196531
ENSMUSG00000031446.15_13194350_13197362_1	chr8	+	911	2	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	38729	578	38610	-578	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGACCGTCTTGGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	13194349	13197362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13194430_13196531
ENSMUSG00000031446.15_13194382_13197362_1	chr8	+	879	2	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	38761	578	38642	-578	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGACCGTCTTGGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	13194381	13197362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13194430_13196531
ENSMUSG00000031447.8_13209161_13217233_1	chr8	+	469	3	ISM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	0	8105	0	-8098	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAGCCTCACAATTACT	NA	NA	NA	NA	NA	NA	NA	NA	13209160	13217233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13209435_13215848_13215968_13217157
ENSMUSG00000031447.8_13209366_13225338_1	chr8	+	2024	9	FSM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	205	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGTGTCCTTCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	13209365	13225338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
ENSMUSG00000031447.8_13209392_13217824_1	chr8	+	400	4	ISM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	231	7514	49	-7507	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACAACTGACATCAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	13209391	13217824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806
ENSMUSG00000031447.8_13217219_13221293_1	chr8	+	407	3	ISM	ENSMUSG00000031447.8	ENST00000332556.5	2043	9	7876	4038	7876	-4038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTACAATGTTACTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	13217218	13221293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13217378_13217806_13217966_13221204
ENSMUSG00000031447.8_13217323_13222578_1	chr8	+	431	4	ISM	ENSMUSG00000031447.8	ENST00000332556.5	2043	9	7980	2753	7980	-2753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGTGGGAGTTGCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	13217322	13222578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13217378_13217806_13217966_13221204_13221384_13222540
ENSMUSG00000031447.8_13217904_13223650_1	chr8	+	385	4	ISM	ENSMUSG00000031447.8	ENST00000332556.5	2043	9	8561	1681	8561	-1681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAAGGAGTGCGCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	13217903	13223650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13217966_13221204_13221384_13222540_13222661_13223626
ENSMUSG00000031447.8_13221203_13223884_1	chr8	+	473	4	ISM	ENSMUSG00000031447.8	ENST00000332556.5	2043	9	11860	1447	11860	-1447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCTCAATGTCTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	13221202	13223884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13221384_13222540_13222661_13223626_13223694_13223779
ENSMUSG00000031447.8_13222559_13224511_1	chr8	+	433	4	ISM	ENSMUSG00000031447.8	ENST00000332556.5	2043	9	13216	820	13216	-820	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCATTGGCAGGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	13222558	13224511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13222661_13223626_13223694_13223779_13223951_13224418
ENSMUSG00000031453.17_13618421_13620318_1	chr8	-	426	2	ISM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	107285	1473	107285	-1473	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAGGGATCTGTTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	13620318	13618420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_13618767_13620238
ENSMUSG00000031453.17_13634948_13638076_1	chr8	-	404	4	ISM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	89527	18000	89527	-18000	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGGGAGGCGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	13638076	13634947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_13635037_13635673_13635749_13636873_13636989_13637951
ENSMUSG00000031453.17_13637953_13640289_1	chr8	-	393	3	ISM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	87314	21005	87314	-21005	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGTTCGCCCTGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	13640289	13637952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_13638101_13638863_13639021_13640201
ENSMUSG00000031467.11_18896529_18934370_1	chr8	+	3540	8	FSM	ENSMUSG00000031467.11	ENSMUST00000033847.5	2841	8	234	-933	234	933	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGAAAGGATGTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	18896528	18934370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929749_18931753
ENSMUSG00000031467.11_18929658_18935212_1	chr8	+	3546	2	ISM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	33365	6165	33363	1775	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGTACTTTGGTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	18929657	18935212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_18929745_18931753
ENSMUSG00000031479.10_22682825_22708769_1	chr8	+	1484	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	0	2090	0	-2090	multi-exon	TRUE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATATTAATTTGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	22682824	22708769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ENSMUSG00000031479.10_22688936_22708917_1	chr8	+	1452	13	ISM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	6111	1942	6111	-1942	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCACACATGAAGGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	22688935	22708917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ENSMUSG00000031479.10_22695774_22709107_1	chr8	+	1433	11	ISM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	12949	1752	12949	-1752	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGATGCAGAGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	22695773	22709107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ENSMUSG00000031479.10_22696866_22709217_1	chr8	+	1446	10	ISM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	14041	1642	14041	-1642	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGTTTCATGAGTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	22696865	22709217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ENSMUSG00000031479.10_22701634_22709494_1	chr8	+	1428	6	ISM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	18809	1365	18809	-1365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATCATAGGCCAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	22701633	22709494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ENSMUSG00000031479.10_22707190_22709785_1	chr8	+	1484	3	ISM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	24365	1074	24365	-1074	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGAGGACACTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	22707189	22709785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_22707226_22708227_22708305_22708414
ENSMUSG00000031481.9_22835033_22861215_1	chr8	+	761	10	NIC	ENSMUSG00000031481.9	novel	773	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAAAAGTTTGCAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	22835032	22861215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_22835062_22835834_22835917_22836036_22836126_22839341_22839404_22841458_22841540_22845486_22845588_22849410_22849503_22855929_22856023_22859526_22859598_22861154
ENSMUSG00000031485.16_27532733_27544038_1	chr8	+	1331	8	FSM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	150	2122	107	-557	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCAGTCCTGGCGCAT	NA	NA	NA	NA	NA	NA	NA	NA	27532732	27544038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
ENSMUSG00000031485.16_27535426_27544161_1	chr8	+	1337	6	ISM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	2843	1999	2800	-434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCGTAAGAGCTCCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	27535425	27544161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
ENSMUSG00000031485.16_27535950_27544278_1	chr8	+	1420	5	ISM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	3367	1882	3324	-317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGACTCTTCTTTATCTA	NA	NA	NA	NA	NA	NA	NA	NA	27535949	27544278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
ENSMUSG00000031485.16_27541290_27544412_1	chr8	+	1338	3	ISM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	8707	1748	8664	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCATTTAACAAATAACTT	NA	NA	NA	NA	NA	NA	NA	NA	27541289	27544412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_27541430_27542263_27542363_27543313
ENSMUSG00000031485.16_27541335_27544482_1	chr8	+	1363	3	ISM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	8752	1678	8709	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTCTGTTTCAATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	27541334	27544482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_27541430_27542263_27542363_27543313
ENSMUSG00000031485.16_27541391_27544595_1	chr8	+	1420	3	ISM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	8808	1565	8765	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGTGATGAGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	27541390	27544595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_27541430_27542263_27542363_27543313
ENSMUSG00000031490.7_27750357_27765526_1	chr8	+	821	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	0	1176	0	-1176	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACATTTACCCTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	27750356	27765526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_27750579_27763350_27763531_27765107
ENSMUSG00000031490.7_27750357_27765526_2	chr8	+	819	3	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	0	-1176	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACATTTACCCTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	27750356	27765526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_27750579_27763350_27763535_27765113
ENSMUSG00000031490.7_27763349_27765745_1	chr8	+	814	2	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	12992	-957	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCTATCTATCTATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	27763348	27765745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_27763531_27765113
ENSMUSG00000031490.7_27763349_27765745_2	chr8	+	820	2	ISM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	12992	957	12992	-957	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCTATCTATCTATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	27763348	27765745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_27763531_27765107
ENSMUSG00000031490.7_27763401_27765802_1	chr8	+	825	2	ISM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	13044	900	13044	-900	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATCTATCTATCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	27763400	27765802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_27763531_27765107
ENSMUSG00000031490.7_27763401_27765802_2	chr8	+	819	2	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	13044	-900	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATCTATCTATCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	27763400	27765802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_27763531_27765113
ENSMUSG00000031497.11_10056633_10085441_1	chr8	+	990	5	FSM	ENSMUSG00000031497.11	ENST00000430559.5	1017	5	29	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTTGCTGGAGTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	10056632	10085441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_10057161_10057249_10057335_10081309_10081423_10081505_10081657_10085328
ENSMUSG00000031497.11_10056633_10085441_2	chr8	+	984	5	NNC	ENSMUSG00000031497.11	novel	4771	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTTGCTGGAGTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	10056632	10085441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_10057155_10057249_10057335_10081309_10081423_10081505_10081657_10085328
ENSMUSG00000031503.14_11490394_11498224_1	chr8	+	1470	10	ISM	ENSMUSG00000031503.14	ENSMUST00000033899.14	6450	48	127589	1063	127589	-1063	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCAGAGCACACCATCC	NA	NA	NA	NA	NA	NA	NA	NA	11490393	11498224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_11490451_11491221_11491348_11491879_11491997_11493070_11493233_11493316_11493416_11493555_11493703_11493830_11493948_11494930_11495123_11495959_11496247_11498058
ENSMUSG00000031503.14_11494981_11499080_1	chr8	+	1451	3	ISM	ENSMUSG00000031503.14	ENSMUST00000033899.14	6450	48	132176	207	132176	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCTCTAGCCAAACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	11494980	11499080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_11495123_11495959_11496247_11498058
ENSMUSG00000031504.7_11503518_11528561_1	chr8	-	1243	2	FSM	ENSMUSG00000031504.7	ENSMUST00000033900.7	1392	2	149	0	149	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTTCTTGGGAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	11528561	11503517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_11504527_11528327
ENSMUSG00000031505.12_11547506_11559372_1	chr8	+	567	6	ISM	ENSMUSG00000031505.12	ENSMUST00000177955.8	1307	10	0	3915	0	-3915	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGGCCTCTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	11547505	11559372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321
ENSMUSG00000031505.12_11547633_11560236_1	chr8	+	669	8	ISM	ENSMUSG00000031505.12	ENSMUST00000033901.11	1359	10	65	3051	49	-3051	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGGACAGCAACGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	11547632	11560236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226
ENSMUSG00000031505.12_11554885_11562951_1	chr8	+	699	8	ISM	ENSMUSG00000031505.12	ENSMUST00000033901.11	1359	10	7317	336	7301	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGCAGGCCTTCCAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	11554884	11562951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
ENSMUSG00000031505.12_11556780_11563143_1	chr8	+	683	6	ISM	ENSMUSG00000031505.12	ENSMUST00000033901.11	1359	10	9212	144	9196	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTAATGTAGAGTTGATA	NA	NA	NA	NA	NA	NA	NA	NA	11556779	11563143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
ENSMUSG00000031505.12_11559337_11563267_1	chr8	+	756	5	ISM	ENSMUSG00000031505.12	ENSMUST00000033901.11	1359	10	11769	20	11753	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGCTCTGAGACAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	11559336	11563267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
ENSMUSG00000031508.15_11662654_11678522_1	chr8	-	710	4	ISM	ENSMUSG00000031508.15	ENSMUST00000033905.13	2285	6	7232	1070	7089	-1070	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGGACATAGGGGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	11678522	11662653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438
ENSMUSG00000031508.15_11662757_11682927_1	chr8	-	677	5	ISM	ENSMUSG00000031508.15	ENSMUST00000033905.13	2285	6	2827	1173	2684	-1173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAGGAGCCAGAAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	11682927	11662756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438_11678531_11682865
ENSMUSG00000031508.15_11662873_11685449_1	chr8	-	691	6	FSM	ENSMUSG00000031508.15	ENSMUST00000033905.13	2285	6	305	1289	162	-1289	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCGAACCAGCTCAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	11685449	11662872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
ENSMUSG00000031508.15_11665887_11685588_1	chr8	-	683	5	FSM	ENSMUSG00000031508.15	ENSMUST00000169782.3	5156	5	169	4304	23	3169	multi-exon	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAGCAAATGGAGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	11685588	11665886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
ENSMUSG00000031508.15_11669117_11685736_1	chr8	-	752	4	ISM	ENSMUSG00000031508.15	ENSMUST00000033905.13	2285	6	18	7533	18	-61	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGCCTGGAAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	11685736	11669116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_11669298_11678438_11678531_11682865_11683019_11685410
ENSMUSG00000031508.15_11669259_11682915_1	chr8	-	251	3	ISM	ENSMUSG00000031508.15	ENST00000310847.8	758	4	2696	203	2696	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACCCAGGGTTTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	11682915	11669258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_11669364_11678434_11678531_11682865
ENSMUSG00000031513.9_34604411_34607990_1	chr8	-	845	3	ISM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	6197	1685	5957	340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGAATGCAAACCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	34607990	34604410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_34604993_34606007_34606195_34607914
ENSMUSG00000031513.9_34604565_34613983_1	chr8	-	836	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	204	1839	-36	186	multi-exon	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAATAGCCATTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	34613983	34604564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
ENSMUSG00000031513.9_34604567_34613977_1	chr8	-	828	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	210	1841	-30	184	multi-exon	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTAATAGCCATTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	34613977	34604566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
ENSMUSG00000031513.9_34604751_34606055_1	chr8	-	290	2	ISM	ENSMUSG00000031513.9	ENST00000518001.1	538	3	7892	0	7892	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTCGCCTCCTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	34606055	34604750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_34604993_34606007
ENSMUSG00000031513.9_34604875_34613888_1	chr8	-	355	3	FSM	ENSMUSG00000031513.9	ENST00000518001.1	538	3	59	124	59	-124	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGCTGAACTGTAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	34613888	34604874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_34604993_34606007_34606195_34613838
ENSMUSG00000031516.12_34557574_34575950_1	chr8	-	1245	7	NNC	ENSMUSG00000031516.12	novel	1249	7	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCCTCAATTTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	34575950	34557573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_34557997_34559664_34559808_34560782_34560831_34562037_34562127_34564342_34564442_34573495_34573561_34575572
ENSMUSG00000031516.12_34557574_34575950_2	chr8	-	1245	7	NNC	ENSMUSG00000031516.12	novel	1249	7	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCCTCAATTTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	34575950	34557573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_34557997_34559664_34559808_34560782_34560831_34562037_34562127_34564342_34564449_34573495_34573554_34575572
ENSMUSG00000031516.12_34557574_34575950_3	chr8	-	1246	7	NNC	ENSMUSG00000031516.12	novel	1249	7	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCCTCAATTTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	34575950	34557573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_34557991_34559664_34559808_34560782_34560831_34562037_34562127_34564342_34564449_34573495_34573561_34575572
ENSMUSG00000031519.5_55003366_55040446_1	chr8	+	1154	7	FSM	ENSMUSG00000031519.5	ENSMUST00000033918.4	1585	7	0	431	0	-431	multi-exon	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTTTTAAAATATAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	55003365	55040446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_55003676_55033860_55033941_55036585_55036694_55037693_55037845_55038013_55038149_55038805_55038998_55040268
ENSMUSG00000031519.5_55003366_55040468_1	chr8	+	1176	7	FSM	ENSMUSG00000031519.5	ENSMUST00000033918.4	1585	7	0	409	0	-409	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGTGATGATGCATATAA	NA	NA	NA	NA	NA	NA	NA	NA	55003365	55040468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_55003676_55033860_55033941_55036585_55036694_55037693_55037845_55038013_55038149_55038805_55038998_55040268
ENSMUSG00000031519.5_55003366_55040510_1	chr8	+	1218	7	FSM	ENSMUSG00000031519.5	ENSMUST00000033918.4	1585	7	0	367	0	-367	multi-exon	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAAGTGGATTTTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	55003365	55040510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_55003676_55033860_55033941_55036585_55036694_55037693_55037845_55038013_55038149_55038805_55038998_55040268
ENSMUSG00000031519.5_55003481_55040525_1	chr8	+	1118	7	FSM	ENSMUSG00000031519.5	ENSMUST00000033918.4	1585	7	115	352	115	-352	multi-exon	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGAAGAATACTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	55003480	55040525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_55003676_55033860_55033941_55036585_55036694_55037693_55037845_55038013_55038149_55038805_55038998_55040268
ENSMUSG00000031519.5_55003528_55040568_1	chr8	+	1114	7	FSM	ENSMUSG00000031519.5	ENSMUST00000033918.4	1585	7	162	309	162	-309	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGGTTTATATTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55003527	55040568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_55003676_55033860_55033941_55036585_55036694_55037693_55037845_55038013_55038149_55038805_55038998_55040268
ENSMUSG00000031519.5_55003532_55040558_1	chr8	+	1100	7	FSM	ENSMUSG00000031519.5	ENSMUST00000033918.4	1585	7	166	319	166	-319	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTACGGTCTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	55003531	55040558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_55003676_55033860_55033941_55036585_55036694_55037693_55037845_55038013_55038149_55038805_55038998_55040268
ENSMUSG00000031519.5_55003548_55040588_1	chr8	+	1114	7	FSM	ENSMUSG00000031519.5	ENSMUST00000033918.4	1585	7	182	289	182	-289	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTATATCATCTCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	55003547	55040588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_55003676_55033860_55033941_55036585_55036694_55037693_55037845_55038013_55038149_55038805_55038998_55040268
ENSMUSG00000031519.5_55003587_55040643_1	chr8	+	1130	7	FSM	ENSMUSG00000031519.5	ENSMUST00000033918.4	1585	7	221	234	221	-234	multi-exon	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATTCATTTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	55003586	55040643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_55003676_55033860_55033941_55036585_55036694_55037693_55037845_55038013_55038149_55038805_55038998_55040268
ENSMUSG00000031519.5_55033855_55040685_1	chr8	+	1089	6	ISM	ENSMUSG00000031519.5	ENSMUST00000239106.2	1421	8	9394	192	9394	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTACACTTTTGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	55033854	55040685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_55033941_55036585_55036694_55037693_55037845_55038013_55038149_55038805_55038998_55040268
ENSMUSG00000031519.5_55036586_55040877_1	chr8	+	1195	5	ISM	ENSMUSG00000031519.5	ENSMUST00000239106.2	1421	8	12125	0	12125	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTAATAATTAATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	55036585	55040877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_55036694_55037693_55037845_55038013_55038149_55038805_55038998_55040268
ENSMUSG00000031521.6_53964833_53973379_1	chr8	+	805	7	NIC	ENSMUSG00000031521.6	novel	1181	9	NA	NA	71	-2990	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACTTGTTACCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	53964832	53973379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973279
ENSMUSG00000031521.6_53964833_53974141_1	chr8	+	870	8	ISM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	71	2232	71	-2228	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGATTTTAAGAATTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	53964832	53974141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084
ENSMUSG00000031521.6_53966578_53976247_1	chr8	+	849	8	ISM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	1816	126	1816	-122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCATGGTTTCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	53966577	53976247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976210
ENSMUSG00000031521.6_53966664_53976270_1	chr8	+	786	8	ISM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	1902	103	1902	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACACAATGAGCCAACCGAA	NA	NA	NA	NA	NA	NA	NA	NA	53966663	53976270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976210
ENSMUSG00000031521.6_53966708_53976373_1	chr8	+	845	8	ISM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	1946	0	1946	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGACATTATGGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	53966707	53976373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976210
ENSMUSG00000031527.8_35936421_35949738_1	chr8	-	482	5	ISM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	12949	4014	12949	-4014	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCTATTCGGATGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	35949738	35936420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669
ENSMUSG00000031527.8_35943652_35958455_1	chr8	-	467	4	ISM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	4232	11245	4232	-11245	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGGGAACTAAGTACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	35958455	35943651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_35943723_35945713_35945798_35949669_35949881_35958354
ENSMUSG00000031527.8_35943704_35958516_1	chr8	-	476	4	ISM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	4171	11297	4171	-11297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTCCCTCAGGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	35958516	35943703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_35943723_35945713_35945798_35949669_35949881_35958354
ENSMUSG00000031530.7_35275009_35284345_1	chr8	+	533	3	ISM	ENSMUSG00000031530.7	ENSMUST00000033930.5	2740	4	558	2703	558	-2703	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGATGCCCTGGGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	35275008	35284345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_35275328_35283600_35283747_35284277
ENSMUSG00000031530.7_35275249_35285639_1	chr8	+	533	4	FSM	ENSMUSG00000031530.7	ENSMUST00000033930.5	2740	4	798	1409	798	-1409	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGAAGCGGGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	35275248	35285639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_35275328_35283600_35283747_35284277_35284498_35285551
ENSMUSG00000031532.8_34621717_34635011_1	chr8	+	992	4	ISM	ENSMUSG00000031532.8	ENSMUST00000033933.8	1860	6	-13	2964	0	-2964	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTTGTGCTAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	34621716	34635011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_34621991_34628348_34628528_34632294_34632695_34634872
ENSMUSG00000031532.8_34621835_34635765_1	chr8	+	1029	5	ISM	ENSMUSG00000031532.8	ENSMUST00000033933.8	1860	6	105	2210	105	-2210	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCTAGATGCTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	34621834	34635765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_34621991_34628348_34628528_34632294_34632695_34634872_34635012_34635610
ENSMUSG00000031532.8_34621948_34637280_1	chr8	+	947	6	FSM	ENSMUSG00000031532.8	ENSMUST00000033933.8	1860	6	218	695	218	-695	multi-exon	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTGAAGGCAAACACTG	NA	NA	NA	NA	NA	NA	NA	NA	34621947	34637280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_34621991_34628348_34628528_34632294_34632695_34634872_34635012_34635610_34635766_34637249
ENSMUSG00000031532.8_34628348_34637384_1	chr8	+	1009	5	ISM	ENSMUSG00000031532.8	ENSMUST00000033933.8	1860	6	6618	591	6618	-591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTAGCTTTTCGTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	34628347	34637384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_34628528_34632294_34632695_34634872_34635012_34635610_34635766_34637249
ENSMUSG00000031532.8_34632375_34637590_1	chr8	+	955	4	ISM	ENSMUSG00000031532.8	ENSMUST00000033933.8	1860	6	10645	385	10645	-385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTGGCTTTGGACCATGA	NA	NA	NA	NA	NA	NA	NA	NA	34632374	34637590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_34632695_34634872_34635012_34635610_34635766_34637249
ENSMUSG00000031532.8_34634871_34638001_1	chr8	+	1048	3	ISM	ENSMUSG00000031532.8	ENSMUST00000239436.2	1897	6	13154	-2	13141	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGTTTCGTGTGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	34634870	34638001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_34635012_34635610_34635766_34637249
ENSMUSG00000031532.8_34635608_34638001_1	chr8	+	910	2	ISM	ENSMUSG00000031532.8	ENSMUST00000239436.2	1897	6	13891	-2	13878	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGTTTCGTGTGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	34635607	34638001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_34635766_34637249
ENSMUSG00000031533.5_22901414_22919339_1	chr8	+	1136	7	FSM	ENSMUSG00000031533.5	ENSMUST00000033934.5	1515	7	37	342	37	-342	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGGTCGAGCACATAGA	NA	NA	NA	NA	NA	NA	NA	NA	22901413	22919339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
ENSMUSG00000031533.5_22901414_22919386_1	chr8	+	1183	7	FSM	ENSMUSG00000031533.5	ENSMUST00000033934.5	1515	7	37	295	37	-295	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGATATTCTCAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	22901413	22919386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
ENSMUSG00000031533.5_22901545_22919452_1	chr8	+	1118	7	FSM	ENSMUSG00000031533.5	ENSMUST00000033934.5	1515	7	168	229	168	-229	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTGAAGATGTATATTAA	NA	NA	NA	NA	NA	NA	NA	NA	22901544	22919452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
ENSMUSG00000031533.5_22904886_22919685_1	chr8	+	1141	6	ISM	ENSMUSG00000031533.5	ENSMUST00000033934.5	1515	7	3509	-4	3509	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTAATTTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	22904885	22919685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
ENSMUSG00000031534.16_22952630_22963483_1	chr8	-	913	3	ISM	ENSMUSG00000031534.16	ENSMUST00000163774.3	1435	5	3388	0	3388	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTTGCATCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	22963483	22952629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22953392_22961464_22961590_22963457
ENSMUSG00000031534.16_22952811_22963596_1	chr8	-	845	3	ISM	ENSMUSG00000031534.16	ENSMUST00000163774.3	1435	5	3275	181	3275	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCCCTTTAATTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	22963596	22952810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_22953392_22961464_22961590_22963457
ENSMUSG00000031534.16_22953083_22966871_1	chr8	-	923	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	27	452	0	-452	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAGAATCCTAGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	22966871	22953082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
ENSMUSG00000031534.16_22953140_22966871_1	chr8	-	866	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	27	509	0	-509	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTGAAGATCAATGATGA	NA	NA	NA	NA	NA	NA	NA	NA	22966871	22953139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
ENSMUSG00000031538.7_23261767_23272115_1	chr8	+	1321	10	FSM	ENSMUSG00000031538.7	ENST00000519510.5	1372	10	53	-2	53	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAATGACAAAGAAAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	23261766	23272115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_23261848_23262221_23262333_23263646_23263725_23265580_23265756_23266806_23266893_23268118_23268315_23268428_23268566_23268670_23268812_23270441_23270606_23271963
ENSMUSG00000031539.7_23277370_23280993_1	chr8	-	2197	2	ISM	ENSMUSG00000031539.7	ENSMUST00000163739.3	3417	9	14627	0	14627	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTCTGGTTACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	23280993	23277369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_23279470_23280896
ENSMUSG00000031539.7_23277717_23282815_1	chr8	-	2188	4	ISM	ENSMUSG00000031539.7	ENSMUST00000163739.3	3417	9	12805	347	12805	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACACCCTGCTGTGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	23282815	23277716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733
ENSMUSG00000031539.7_23278464_23294069_1	chr8	-	2183	8	ISM	ENSMUSG00000031539.7	ENSMUST00000163739.3	3417	9	1551	1094	1551	-1094	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAGGCAGGTTTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	23294069	23278463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733_23282868_23283081_23283168_23287097_23287236_23289656_23289829_23293775
ENSMUSG00000031543.19_23629121_23639297_1	chr8	+	1667	5	FSM	ENSMUSG00000031543.19	ENSMUST00000121075.8	1740	5	75	-2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAACACGTTAGCAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	23629120	23639297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_23629512_23630160_23630245_23631179_23631246_23631611_23631737_23638296
ENSMUSG00000031545.7_23664583_23674586_1	chr8	-	1015	9	NIC	ENSMUSG00000031545.7	novel	1016	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGCCGGTCCTGAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	23674586	23664582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670728_23672646_23672980_23674544
ENSMUSG00000031546.7_23716632_23719520_1	chr8	-	740	3	ISM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	8155	0	8155	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCAAATGTCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	23719520	23716631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_23717192_23717264_23717356_23719431
ENSMUSG00000031546.7_23716842_23724791_1	chr8	-	764	6	ISM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	2884	210	2884	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTACTACTTACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	23724791	23716841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769
ENSMUSG00000031546.7_23716967_23727022_1	chr8	-	731	7	ISM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	653	335	653	-335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCGATGCAGAATTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	23727022	23716966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995
ENSMUSG00000031546.7_23717078_23727502_1	chr8	-	730	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	173	446	173	-446	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAGTGGTCACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	23727502	23717077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
ENSMUSG00000031546.7_23717173_23727675_1	chr8	-	808	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	0	541	0	-541	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGGGCTCACAGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	23727675	23717172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
ENSMUSG00000031555.16_25439627_25486868_1	chr8	-	3435	17	NNC	ENSMUSG00000031555.16	novel	3985	22	NA	NA	19960	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCGTCCTCTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	25486868	25439626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455047_25456660_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670
ENSMUSG00000031555.16_25439669_25487830_1	chr8	-	3464	18	ISM	ENSMUSG00000031555.16	ENSMUST00000084035.12	3985	22	19108	42	18998	0	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAACATTTACAAC	NA	NA	NA	NA	NA	NA	NA	NA	25487830	25439668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758
ENSMUSG00000031555.16_25439774_25487837_1	chr8	-	3365	18	NNC	ENSMUSG00000031555.16	novel	3985	22	NA	NA	18991	-105	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAATTTTTTCATAATC	NA	NA	NA	NA	NA	NA	NA	NA	25487837	25439773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455047_25456660_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758
ENSMUSG00000031555.16_25439933_25496236_2	chr8	-	3387	21	ISM	ENSMUSG00000031555.16	ENSMUST00000084035.12	3985	22	10702	306	10592	-264	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTAATATTTTCGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	25496236	25439932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192
ENSMUSG00000031555.16_25440186_25506828_2	chr8	-	3316	22	FSM	ENSMUSG00000031555.16	ENSMUST00000084035.12	3985	22	110	559	0	-517	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATCATGGTAAAGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	25506828	25440185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ENSMUSG00000031555.16_25440186_25506938_2	chr8	-	3426	22	FSM	ENSMUSG00000031555.16	ENSMUST00000084035.12	3985	22	0	559	0	-517	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATCATGGTAAAGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	25506938	25440185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ENSMUSG00000031556.7_25507323_25510522_1	chr8	+	442	3	ISM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	96	2754	0	-2384	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCCAGCCCCAGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	25507322	25510522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_25507609_25508081_25508170_25510454
ENSMUSG00000031556.7_25507539_25512637_1	chr8	+	330	4	FSM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	312	639	216	-269	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGTCGACCGCTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	25507538	25512637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_25507609_25508081_25508170_25510454_25510571_25512581
ENSMUSG00000031556.7_25507539_25512746_1	chr8	+	439	4	FSM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	312	530	216	-160	multi-exon	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGGCTGATGCCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	25507538	25512746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_25507609_25508081_25508170_25510454_25510571_25512581
ENSMUSG00000031556.7_25510453_25512906_1	chr8	+	443	2	ISM	ENSMUSG00000031556.7	ENSMUST00000210536.2	727	3	3130	0	3130	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACCAAGTTTTTCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	25510452	25512906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_25510571_25512581
ENSMUSG00000031557.17_25532731_25549872_1	chr8	-	776	7	ISM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	42129	1875	42129	-1875	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTTGATGACGAAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	25549872	25532730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849
ENSMUSG00000031557.17_25532805_25549913_1	chr8	-	743	7	ISM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	42088	1949	42088	-1949	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGTGCTGGCAAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	25549913	25532804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849
ENSMUSG00000031557.17_25532960_25552488_1	chr8	-	763	8	ISM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	39513	2104	39513	-2104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGAAGAGAAAAGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	25552488	25532959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390
ENSMUSG00000031557.17_25542378_25578400_1	chr8	-	737	9	ISM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	13601	11522	13601	-11522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAAATGTCCACCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	25578400	25542377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357
ENSMUSG00000031557.17_25547310_25578521_1	chr8	-	796	8	ISM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	13480	16454	13480	-16454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGCCTCTTCTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	25578521	25547309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357
ENSMUSG00000031557.17_25549198_25591808_1	chr8	-	741	7	ISM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	193	18342	193	-18342	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCTCCCCTCATTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	25591808	25549197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25591675
ENSMUSG00000031557.17_25549913_25592001_1	chr8	-	772	6	ISM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	0	19057	0	-19057	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCAGGTGGCCTACAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	25592001	25549912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25591675
ENSMUSG00000031558.16_48140519_48327551_1	chr5	+	2313	5	ISM	ENSMUSG00000031558.16	ENSMUST00000174313.8	7734	37	23	135302	20	-135302	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGACATTAAAAACCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	48140518	48327551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496
ENSMUSG00000031558.16_48141162_48368654_1	chr5	+	2236	11	ISM	ENSMUSG00000031558.16	ENST00000504154.6	8008	37	663	94464	663	-94199	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCAGATGCCTTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	48141161	48368654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624
ENSMUSG00000031558.16_48141312_48377050_1	chr5	+	2247	13	ISM	ENSMUSG00000031558.16	ENST00000504154.6	8008	37	813	86068	813	-85803	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACCTGCACAACTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	48141311	48377050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003
ENSMUSG00000031558.16_48141360_48377112_1	chr5	+	2261	13	ISM	ENSMUSG00000031558.16	ENST00000504154.6	8008	37	861	86006	861	-85741	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACCTTCTCAGCCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	48141359	48377112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003
ENSMUSG00000031558.16_48141481_48377324_1	chr5	+	2241	14	ISM	ENSMUSG00000031558.16	ENST00000504154.6	8008	37	982	85794	982	-85529	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCCAATTGAGACCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	48141480	48377324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258
ENSMUSG00000031558.16_48141887_48389323_1	chr5	+	2253	18	ISM	ENSMUSG00000031558.16	ENST00000504154.6	8008	37	1388	73795	1388	-73530	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCTCACCAGTAACCG	NA	NA	NA	NA	NA	NA	NA	NA	48141886	48389323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253
ENSMUSG00000031558.16_48142051_48392750_1	chr5	+	2234	19	ISM	ENSMUSG00000031558.16	ENST00000504154.6	8008	37	1552	70368	1552	-70103	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTATATGACAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	48142050	48392750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679
ENSMUSG00000031558.16_48142336_48395794_1	chr5	+	2266	21	ISM	ENSMUSG00000031558.16	ENST00000504154.6	8008	37	1837	67324	1837	-67059	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAACAAGGGCTTGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	48142335	48395794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717
ENSMUSG00000031558.16_48377041_48439377_1	chr5	+	2244	20	ISM	ENSMUSG00000031558.16	ENSMUST00000170109.9	7758	38	236545	23476	236542	-23476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAGGATAAATGAACCAAT	NA	NA	NA	NA	NA	NA	NA	NA	48377040	48439377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286
ENSMUSG00000031558.16_48382065_48453830_1	chr5	+	2240	19	ISM	ENSMUSG00000031558.16	ENSMUST00000174313.8	7734	37	241569	9023	241566	-9023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGCCCTAAAGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	48382064	48453830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750
ENSMUSG00000031558.16_48389326_48459854_1	chr5	+	2334	18	ISM	ENSMUSG00000031558.16	ENSMUST00000174313.8	7734	37	248830	2999	248827	-2999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTGACCAGAGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	48389325	48459854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607
ENSMUSG00000031558.16_48394654_48460242_1	chr5	+	2252	17	ISM	ENSMUSG00000031558.16	ENSMUST00000174313.8	7734	37	254158	2611	254155	-2611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGGGCCAGCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	48394653	48460242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094
ENSMUSG00000031558.16_48395704_48461397_1	chr5	+	2275	17	ISM	ENSMUSG00000031558.16	ENSMUST00000174313.8	7734	37	255208	1456	255205	-1456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGCCTGTCAAACAACTAA	NA	NA	NA	NA	NA	NA	NA	NA	48395703	48461397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ENSMUSG00000031558.16_48401974_48461594_1	chr5	+	2252	15	ISM	ENSMUSG00000031558.16	ENSMUST00000174313.8	7734	37	261478	1259	261475	-1259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTTCTAGCTTCGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	48401973	48461594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ENSMUSG00000031558.16_48402934_48461738_1	chr5	+	2313	14	ISM	ENSMUSG00000031558.16	ENSMUST00000174313.8	7734	37	262438	1115	262435	-1115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAATAATAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	48402933	48461738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ENSMUSG00000031558.16_48414138_48461992_1	chr5	+	2235	11	ISM	ENSMUSG00000031558.16	ENSMUST00000174313.8	7734	37	273642	861	273639	-861	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTGTGAGTGAGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	48414137	48461992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ENSMUSG00000031558.16_48417005_48462298_1	chr5	+	2238	9	ISM	ENSMUSG00000031558.16	ENSMUST00000174313.8	7734	37	276509	555	276506	-555	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTTTCTATGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	48417004	48462298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ENSMUSG00000031558.16_48439120_48462508_1	chr5	+	2272	7	ISM	ENSMUSG00000031558.16	ENSMUST00000174313.8	7734	37	298624	345	298621	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAACATAGGATGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	48439119	48462508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ENSMUSG00000031558.16_48439379_48462688_1	chr5	+	2283	6	ISM	ENSMUSG00000031558.16	ENSMUST00000174313.8	7734	37	298883	165	298880	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGAACTTATCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	48439378	48462688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ENSMUSG00000031558.16_48439455_48462730_1	chr5	+	2249	6	ISM	ENSMUSG00000031558.16	ENSMUST00000174313.8	7734	37	298959	123	298956	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTTACAAATTAATTAATA	NA	NA	NA	NA	NA	NA	NA	NA	48439454	48462730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ENSMUSG00000031558.16_48440728_48462853_1	chr5	+	2301	5	ISM	ENSMUSG00000031558.16	ENSMUST00000174313.8	7734	37	300232	0	300229	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCCCACGTTAACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	48440727	48462853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ENSMUSG00000031558.16_48453760_48462981_1	chr5	+	2287	4	ISM	ENSMUSG00000031558.16	ENSMUST00000174313.8	7734	37	313264	-128	313261	128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAGAAAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	48453759	48462981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_48453906_48459607_48459897_48460094_48460307_48461341
ENSMUSG00000031563.9_48281550_48309292_1	chr8	-	1279	8	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	133939	59	133939	-59	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTACATGCTTTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	48309292	48281549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218
ENSMUSG00000031563.9_48281577_48309383_1	chr8	-	1343	8	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	133848	86	133848	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTTGTAAAGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	48309383	48281576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218
ENSMUSG00000031563.9_48281811_48311949_1	chr8	-	1294	9	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	131282	320	131282	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTACTTCACAAGAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	48311949	48281810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764
ENSMUSG00000031563.9_48284701_48316938_1	chr8	-	1290	9	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	126293	3210	126293	-3210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCGACTGCGGGAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	48316938	48284700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887
ENSMUSG00000031563.9_48295960_48317552_1	chr8	-	1286	10	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	125679	14469	125679	-14469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCAGGCGTGCTGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	48317552	48295959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539
ENSMUSG00000031563.9_48299220_48321448_1	chr8	-	1277	10	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	121783	17729	121783	-17729	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTCCACTGAGCGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	48321448	48299219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321353
ENSMUSG00000031563.9_48300500_48321581_1	chr8	-	1284	9	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	121650	19009	121650	-19009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGTGAGAAACAGCGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	48321581	48300499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321353
ENSMUSG00000031563.9_48300527_48321659_1	chr8	-	1335	9	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	121572	19036	121572	-19036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCTCAGCTCTCGACAG	NA	NA	NA	NA	NA	NA	NA	NA	48321659	48300526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321353
ENSMUSG00000031563.9_48302443_48321774_1	chr8	-	1281	8	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	121457	20952	121457	-20952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGGACCCGAAGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	48321774	48302442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321353
ENSMUSG00000031563.9_48304973_48322906_1	chr8	-	1311	8	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	120325	23482	120325	-23482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCAGAGCGGCGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	48322906	48304972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321353_48321827_48322813
ENSMUSG00000031563.9_48309218_48328306_1	chr8	-	1263	8	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	114925	27727	114925	-27727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCGGAGCTGGGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	48328306	48309217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321353_48321827_48322813_48322904_48328263
ENSMUSG00000031563.9_48309246_48328379_1	chr8	-	1308	8	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	114852	27755	114852	-27755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCATGCTCGACCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	48328379	48309245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321353_48321827_48322813_48322904_48328263
ENSMUSG00000031563.9_48309311_48328415_1	chr8	-	1279	8	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	114816	27820	114816	-27820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAAGCAAATGCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	48328415	48309310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321353_48321827_48322813_48322904_48328263
ENSMUSG00000031563.9_48311921_48333201_1	chr8	-	1281	9	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	110030	30430	110030	-30430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCTGTCTGTTTCGAAC	NA	NA	NA	NA	NA	NA	NA	NA	48333201	48311920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321353_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135
ENSMUSG00000031563.9_48317087_48336658_1	chr8	-	1368	8	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	106573	35596	106573	-35596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACGCAGGAGGGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	48336658	48317086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48317168_48317539_48317670_48321353_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528
ENSMUSG00000031563.9_48317609_48340162_1	chr8	-	1274	8	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	103069	36118	103069	-36118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCCGCTGCTGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	48340162	48317608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48317670_48321353_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106
ENSMUSG00000031563.9_48321440_48353740_1	chr8	-	1281	9	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	89491	39949	89491	-39949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTCTCCTCTTGTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	48353740	48321439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687
ENSMUSG00000031563.9_48321487_48353800_1	chr8	-	1294	9	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	89431	39996	89431	-39996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCATCCCTGTCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	48353800	48321486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687
ENSMUSG00000031563.9_48321771_48443158_1	chr8	-	1269	11	ISM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	73	40280	73	-40280	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCGGGGCTCTCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	48443158	48321770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ENSMUSG00000031565.19_26008911_26052194_1	chr8	+	1403	7	ISM	ENSMUSG00000031565.19	ENST00000341462.9	2966	17	61	11475	61	-11475	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAACAAGACAGTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	26008910	26052194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153
ENSMUSG00000031565.19_26008911_26052270_1	chr8	+	1479	7	ISM	ENSMUSG00000031565.19	ENST00000341462.9	2966	17	61	11399	61	-11399	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGCTGAAGCACATCGAG	NA	NA	NA	NA	NA	NA	NA	NA	26008910	26052270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153
ENSMUSG00000031565.19_26009059_26052298_1	chr8	+	1359	7	ISM	ENSMUSG00000031565.19	ENST00000341462.9	2966	17	209	11371	209	-11371	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAAGATCGGGCCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	26009058	26052298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153
ENSMUSG00000031565.19_26009360_26056863_1	chr8	+	1386	9	ISM	ENSMUSG00000031565.19	ENST00000341462.9	2966	17	510	6806	510	-6806	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCCATAGCCAGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	26009359	26056863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726
ENSMUSG00000031565.19_26022297_26050775_1	chr8	+	718	5	ISM	ENSMUSG00000031565.19	ENST00000532791.5	4064	18	13476	14050	0	-12894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTCTGACAAGGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	26022296	26050775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735
ENSMUSG00000031565.19_26022297_26058313_1	chr8	+	1439	9	ISM	ENSMUSG00000031565.19	ENST00000341462.9	2966	17	13447	5356	0	-5356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGAGGATCCCCGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	26022296	26058313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203
ENSMUSG00000031565.19_26045522_26059776_1	chr8	+	1451	9	ISM	ENSMUSG00000031565.19	ENST00000341462.9	2966	17	36672	3893	23225	-3893	internal_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGAACTCCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	26045521	26059776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654
ENSMUSG00000031565.19_26045633_26052344_1	chr8	+	736	5	ISM	ENSMUSG00000031565.19	ENST00000532791.5	4064	18	36812	12481	23336	-11325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTCTTAACCTCCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	26045632	26052344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153
ENSMUSG00000031565.19_26045633_26060269_1	chr8	+	1453	10	ISM	ENSMUSG00000031565.19	ENST00000341462.9	2966	17	36783	3400	23336	-3400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGGCTCCTGGGGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	26045632	26060269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156
ENSMUSG00000031565.19_26045768_26060788_1	chr8	+	1379	11	ISM	ENSMUSG00000031565.19	ENST00000341462.9	2966	17	36918	2881	23471	-2881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCCTCCTGGGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	26045767	26060788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725
ENSMUSG00000031565.19_26048090_26062411_1	chr8	+	1455	10	ISM	ENSMUSG00000031565.19	ENST00000341462.9	2966	17	39240	1258	25793	-1258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGCAGACTTTGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	26048089	26062411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353
ENSMUSG00000031565.19_26050800_26063163_1	chr8	+	1382	11	ISM	ENSMUSG00000031565.19	ENST00000341462.9	2966	17	41950	506	28503	-506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATCTTCACTCTGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	26050799	26063163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138
ENSMUSG00000031565.19_26052153_26063279_1	chr8	+	1439	10	ISM	ENSMUSG00000031565.19	ENST00000341462.9	2966	17	43303	390	29856	-390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATAGGCTAGAGGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	26052152	26063279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138
ENSMUSG00000031565.19_26052287_26063670_1	chr8	+	1411	11	ISM	ENSMUSG00000031565.19	ENST00000341462.9	2966	17	43437	-1	29990	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTCCCCCGGGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	26052286	26063670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561
ENSMUSG00000031568.17_47986721_48004916_1	chr8	+	1948	7	NNC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	22	-944	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGGTCTTTCAGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	47986720	48004916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_47986979_47990313_47990395_47995730_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48003729
ENSMUSG00000031568.17_47990368_48005211_1	chr8	+	1931	6	NNC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	3669	-649	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTACAGTGATTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	47990367	48005211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_47990395_47995730_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48003729
ENSMUSG00000031568.17_47997222_48005536_1	chr8	+	1899	3	NIC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	10523	-324	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACATCCTGTAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	47997221	48005536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_47997264_48000823_48000874_48003729
ENSMUSG00000031570.18_26210064_26214475_1	chr8	+	1044	7	FSM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	0	439	0	-439	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCACTAGGTTAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	26210063	26214475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
ENSMUSG00000031570.18_26210127_26214812_1	chr8	+	1401	8	FSM	ENSMUSG00000031570.18	ENSMUST00000139836.8	1539	8	36	102	36	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTATCACCAGAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	26210126	26214812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26213057_26213141_26214106
ENSMUSG00000031570.18_26210239_26214649_1	chr8	+	1158	6	ISM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	175	265	148	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTGTGGTAACATTCC	NA	NA	NA	NA	NA	NA	NA	NA	26210238	26214649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26210403_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
ENSMUSG00000031570.18_26210615_26214812_1	chr8	+	1124	5	ISM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	551	102	524	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTATCACCAGAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	26210614	26214812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
ENSMUSG00000031570.18_26210615_26214914_1	chr8	+	1309	6	ISM	ENSMUSG00000031570.18	ENSMUST00000139836.8	1539	8	524	0	524	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGTGTGTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	26210614	26214914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26213057_26213141_26214106
ENSMUSG00000031570.18_26211200_26214914_1	chr8	+	1169	4	ISM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	1136	0	1109	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGTGTGTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	26211199	26214914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26211265_26211688_26211814_26212456_26212628_26214106
ENSMUSG00000031570.18_26211686_26214914_1	chr8	+	1107	3	ISM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	1622	0	1595	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGTGTGTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	26211685	26214914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26211814_26212456_26212628_26214106
ENSMUSG00000031575.19_26306024_26312916_1	chr8	-	1959	5	ISM	ENSMUSG00000031575.19	ENST00000453999.1	1291	11	10953	-1411	10953	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCAATGTTTGAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	26312916	26306023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722
ENSMUSG00000031575.19_26306341_26317300_1	chr8	-	1909	7	ISM	ENSMUSG00000031575.19	ENST00000453999.1	1291	11	6569	-1094	6569	-317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGATTTCTGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	26317300	26306340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201
ENSMUSG00000031575.19_26306421_26317355_1	chr8	-	1884	7	ISM	ENSMUSG00000031575.19	ENST00000453999.1	1291	11	6514	-1014	6514	-397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATTTTGTTTTGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	26317355	26306420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201
ENSMUSG00000031575.19_26306703_26322738_1	chr8	-	1907	10	ISM	ENSMUSG00000031575.19	ENSMUST00000166078.9	2234	15	7372	-195	1131	195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGCTGATATGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	26322738	26306702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667
ENSMUSG00000031575.19_26306898_26325082_1	chr8	-	1928	12	ISM	ENSMUSG00000031575.19	ENSMUST00000166078.9	2234	15	5028	0	-1213	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTCACTGGAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	26325082	26306897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987
ENSMUSG00000031575.19_26307014_26326116_1	chr8	-	1901	13	ISM	ENSMUSG00000031575.19	ENSMUST00000166078.9	2234	15	3994	116	-2247	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCATCTGGGAAGCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	26326116	26307013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027
ENSMUSG00000031575.19_26307216_26330110_1	chr8	-	1916	15	FSM	ENSMUSG00000031575.19	ENSMUST00000166078.9	2234	15	0	318	0	-202	multi-exon	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGCCCAGACCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	26330110	26307215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039
ENSMUSG00000031575.19_26307435_26321378_1	chr8	-	1106	9	ISM	ENSMUSG00000031575.19	ENST00000453999.1	1291	11	2491	0	2491	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAACCAGTCCTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	26321378	26307434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318876_26321288
ENSMUSG00000031575.19_26307435_26321378_2	chr8	-	1101	9	NNC	ENSMUSG00000031575.19	novel	1291	11	NA	NA	2491	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAACCAGTCCTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	26321378	26307434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309658_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318876_26321288
ENSMUSG00000031575.19_26307435_26330790_1	chr8	-	1871	16	FSM	ENSMUSG00000031575.19	ENSMUST00000068892.15	3307	16	25	1411	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAACCAGTCCTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	26330790	26307434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330609
ENSMUSG00000031575.19_26307626_26323876_1	chr8	-	1202	10	ISM	ENSMUSG00000031575.19	ENST00000453999.1	1291	11	-7	191	-7	-191	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTAAGGACGCCTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	26323876	26307625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318876_26321288_26321377_26322667_26322764_26323778
ENSMUSG00000031575.19_26308578_26326120_1	chr8	-	638	6	ISM	ENSMUSG00000031575.19	ENST00000438037.1	675	7	3694	0	-2251	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTACGTACTCTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	26326120	26308577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26308673_26309653_26309747_26312722_26312885_26323774_26323875_26324987_26325083_26326027
ENSMUSG00000031575.19_26308631_26329804_1	chr8	-	612	7	FSM	ENSMUSG00000031575.19	ENST00000438037.1	675	7	10	53	10	-53	multi-exon	FALSE	canonical	NA	NA	NA	NA	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATATTTTTGAAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	26329804	26308630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_26308673_26309653_26309747_26312722_26312885_26323774_26323875_26324987_26325083_26326027_26326117_26329773
ENSMUSG00000031577.11_31641098_31648784_1	chr8	+	1104	5	NNC	ENSMUSG00000031577.11	novel	1188	5	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1807	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCAAGCAAGCATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	31641097	31648784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_31641528_31643536_31643715_31645541_31645730_31645805_31645950_31648620
ENSMUSG00000031577.11_31641098_31648784_2	chr8	+	1113	5	FSM	ENSMUSG00000031577.11	ENST00000520636.5	1188	5	75	0	75	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCAAGCAAGCATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	31641097	31648784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_31641528_31643536_31643724_31645541_31645730_31645805_31645950_31648620
ENSMUSG00000031577.11_31641098_31648784_3	chr8	+	1105	5	NNC	ENSMUSG00000031577.11	novel	1188	5	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1710	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCAAGCAAGCATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	31641097	31648784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_31641528_31643536_31643724_31645541_31645722_31645805_31645950_31648620
ENSMUSG00000031578.6_31649491_31658792_1	chr8	-	1895	10	NNC	ENSMUSG00000031578.6	novel	1902	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGTCTTGAGAATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	31658792	31649490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656654_31656737_31656788_31658692
ENSMUSG00000031578.6_31649491_31658792_2	chr8	-	1897	10	NNC	ENSMUSG00000031578.6	novel	1902	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGTCTTGAGAATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	31658792	31649490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656462_31656550_31656661_31656737_31656788_31658692
ENSMUSG00000031578.6_31649491_31658792_3	chr8	-	1895	10	NNC	ENSMUSG00000031578.6	novel	1902	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGTCTTGAGAATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	31658792	31649490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653127_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ENSMUSG00000031584.17_34143561_34187565_1	chr8	+	1752	13	FSM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	295	626	-45	-626	multi-exon	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTAACAGCCTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34143560	34187565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ENSMUSG00000031584.17_34143619_34187649_1	chr8	+	1778	13	FSM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	353	542	13	-542	multi-exon	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTACCTGATGGATGAATA	NA	NA	NA	NA	NA	NA	NA	NA	34143618	34187649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ENSMUSG00000031584.17_34143642_34185163_1	chr8	+	1122	11	NNC	ENSMUSG00000031584.17	novel	1158	11	NA	NA	36	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAAAATGGGGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34143641	34185163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34179368_34179481_34183827_34183959_34185026
ENSMUSG00000031584.17_34143642_34185163_3	chr8	+	1117	10	NNC	ENSMUSG00000031584.17	novel	1158	11	NA	NA	36	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAAAATGGGGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34143641	34185163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_34143812_34159903_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34179368_34179481_34183826_34183959_34185026
ENSMUSG00000031584.17_34143728_34185163_1	chr8	+	1031	11	NNC	ENSMUSG00000031584.17	novel	1158	11	NA	NA	122	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAAAATGGGGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34143727	34185163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171498_34171593_34172620_34172708_34179368_34179481_34183826_34183959_34185026
ENSMUSG00000031584.17_34143728_34185163_3	chr8	+	1031	11	NNC	ENSMUSG00000031584.17	novel	1158	11	NA	NA	122	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAAAATGGGGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34143727	34185163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34179368_34179481_34183826_34183959_34185032
ENSMUSG00000031584.17_34143728_34185163_4	chr8	+	1037	11	FSM	ENSMUSG00000031584.17	ENST00000541648.5	1158	11	122	-1	122	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAAAATGGGGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34143727	34185163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34179368_34179481_34183826_34183959_34185026
ENSMUSG00000031584.17_34159996_34187922_1	chr8	+	1760	11	ISM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	16730	269	16390	-269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTTAAAATGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34159995	34187922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ENSMUSG00000031584.17_34170289_34188191_1	chr8	+	1799	8	ISM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	27023	0	26683	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCAGTGTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	34170288	34188191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ENSMUSG00000031585.14_34221861_34266022_1	chr8	+	857	7	ISM	ENSMUSG00000031585.14	ENSMUST00000170705.8	1634	8	0	1170	0	-1170	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGAAGAGTATCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	34221860	34266022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_34222017_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971
ENSMUSG00000031585.14_34221962_34266087_1	chr8	+	821	7	ISM	ENSMUSG00000031585.14	ENSMUST00000170705.8	1634	8	101	1105	101	-1105	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTATTCTTTAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	34221961	34266087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_34222017_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971
ENSMUSG00000031585.14_34222070_34267050_1	chr8	+	1424	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	0	142	0	-142	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGCAGCCCCTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	34222069	34267050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ENSMUSG00000031585.14_34225820_34267192_1	chr8	+	1420	7	ISM	ENSMUSG00000031585.14	ENSMUST00000171010.8	1664	8	3453	9	3453	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTAATGCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34225819	34267192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ENSMUSG00000031586.18_34273809_34419661_1	chr8	-	1292	9	FSM	ENSMUSG00000031586.18	ENST00000287771.9	1289	9	1	-4	1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCCCTCTGCCTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	34419661	34273808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_34274215_34279419_34279524_34285109_34285269_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ENSMUSG00000031586.18_34293967_34419661_1	chr8	-	867	7	FSM	ENSMUSG00000031586.18	ENSMUST00000033995.14	1039	7	172	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTACAGCGTTTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	34419661	34293966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_34294211_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ENSMUSG00000031590.9_41850496_41869964_1	chr8	-	892	9	FSM	ENSMUSG00000031590.9	ENSMUST00000033999.8	1039	9	147	0	147	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTTCTCGAGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	41869964	41850495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867911_41869936
ENSMUSG00000031590.9_41850609_41870001_1	chr8	-	816	9	FSM	ENSMUSG00000031590.9	ENSMUST00000033999.8	1039	9	110	113	110	-113	multi-exon	FALSE	canonical	NA	NA	NA	NA	4135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTTTGTTGTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	41870001	41850608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867911_41869936
ENSMUSG00000031590.9_41850646_41870111_1	chr8	-	889	9	FSM	ENSMUSG00000031590.9	ENSMUST00000033999.8	1039	9	0	150	0	-150	multi-exon	FALSE	canonical	NA	NA	NA	NA	4059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGGACATTTTGTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	41870111	41850645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867911_41869936
ENSMUSG00000031590.9_41851993_41864390_1	chr8	-	612	6	ISM	ENSMUSG00000031590.9	ENSMUST00000033999.8	1039	9	5721	1497	0	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTGTATATTTACATAA	NA	NA	NA	NA	NA	NA	NA	NA	41864390	41851992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259
ENSMUSG00000031590.9_41851993_41864390_2	chr8	-	605	6	NNC	ENSMUSG00000031590.9	novel	610	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTGTATATTTACATAA	NA	NA	NA	NA	NA	NA	NA	NA	41864390	41851992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_41852104_41852603_41852689_41853798_41853904_41860681_41860797_41863300_41863359_41864259
ENSMUSG00000031590.9_41851993_41867912_1	chr8	-	675	7	FSM	ENSMUSG00000031590.9	ENST00000278882.8	669	7	-6	0	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTGTATATTTACATAA	NA	NA	NA	NA	NA	NA	NA	NA	41867912	41851992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863350_41864255_41864386_41867839
ENSMUSG00000031591.15_41794347_41796593_1	chr8	-	471	3	ISM	ENSMUSG00000031591.15	ENST00000314146.10	985	11	11357	-273	11357	273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTCTCTGATGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	41796593	41794346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_41794723_41795921_41795979_41796555
ENSMUSG00000031591.15_41794507_41796679_1	chr8	-	397	3	ISM	ENSMUSG00000031591.15	ENST00000314146.10	985	11	11271	-113	11271	113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATTGTTTACAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	41796679	41794506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_41794723_41795921_41795979_41796555
ENSMUSG00000031591.15_41794619_41802661_1	chr8	-	820	9	ISM	ENSMUSG00000031591.15	ENST00000314146.10	985	11	5289	-1	5289	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGAGGACGTACTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	41802661	41794618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586
ENSMUSG00000031591.15_41794619_41805009_1	chr8	-	899	10	ISM	ENSMUSG00000031591.15	ENST00000314146.10	985	11	2941	-1	2941	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGAGGACGTACTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	41805009	41794618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930
ENSMUSG00000031591.15_41794619_41807138_1	chr8	-	666	7	ISM	ENSMUSG00000031591.15	ENST00000636128.1	751	8	812	-1	812	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGAGGACGTACTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	41807138	41794618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41804930_41805010_41807050
ENSMUSG00000031591.15_41794619_41807954_1	chr8	-	756	8	FSM	ENSMUSG00000031591.15	ENST00000636128.1	751	8	-4	-1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGAGGACGTACTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	41807954	41794618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41804930_41805010_41807050_41807138_41807863
ENSMUSG00000031591.15_41795922_41805009_1	chr8	-	795	9	ISM	ENSMUSG00000031591.15	ENST00000314146.10	985	11	2941	1302	2941	-1302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTCCTCAACACACAAA	NA	NA	NA	NA	NA	NA	NA	NA	41805009	41795921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930
ENSMUSG00000031591.15_41795922_41807954_1	chr8	-	886	10	ISM	ENSMUSG00000031591.15	ENST00000314146.10	985	11	-4	1302	-4	-1302	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTCCTCAACACACAAA	NA	NA	NA	NA	NA	NA	NA	NA	41807954	41795921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807863
ENSMUSG00000031591.15_41796556_41807954_1	chr8	-	829	9	ISM	ENSMUSG00000031591.15	ENST00000314146.10	985	11	-4	1936	-4	-1936	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGCGGCATCGTCATACA	NA	NA	NA	NA	NA	NA	NA	NA	41807954	41796555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807863
ENSMUSG00000031591.15_41799331_41807137_1	chr8	-	489	6	ISM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	20673	6097	813	-4711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGAATGCATGGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	41807137	41799330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050
ENSMUSG00000031591.15_41800077_41813336_1	chr8	-	461	7	ISM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	14474	6843	-5386	-5457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTAAAGCCCTTAACAG	NA	NA	NA	NA	NA	NA	NA	NA	41813336	41800076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289
ENSMUSG00000031591.15_41802585_41827672_1	chr8	-	507	6	ISM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	138	9351	138	-7965	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGCAGAGAACATCATA	NA	NA	NA	NA	NA	NA	NA	NA	41827672	41802584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ENSMUSG00000031591.15_41807064_41827810_1	chr8	-	476	4	ISM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	0	13830	0	-12444	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATCAAAAGCTGGTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	41827810	41807063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_41807138_41807863_41807955_41813289_41813337_41827546
ENSMUSG00000031592.11_41735692_41743816_1	chr8	+	1071	7	ISM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	42877	41313	42877	-41313	internal_fragment	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCTACTGAACAGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	41735691	41743816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757
ENSMUSG00000031595.10_41379270_41443823_1	chr8	+	1542	6	NNC	ENSMUSG00000031595.10	novel	1548	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTACTTGTGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	41379269	41443823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_41379467_41391137_41391425_41429987_41430140_41438570_41438865_41441841_41441982_41443351
ENSMUSG00000031595.10_41379270_41443823_2	chr8	+	1541	6	NNC	ENSMUSG00000031595.10	novel	1548	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTACTTGTGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	41379269	41443823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_41379463_41391126_41391425_41429987_41430140_41438570_41438865_41441841_41441982_41443359
ENSMUSG00000031600.12_40964909_40996949_1	chr8	+	1309	10	FSM	ENSMUSG00000031600.12	ENSMUST00000238339.2	1442	10	0	133	0	-133	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAATAGATGATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	40964908	40996949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850
ENSMUSG00000031600.12_40965194_40999455_1	chr8	+	1289	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	370	4343	285	1397	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTCCGTACAGATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	40965193	40999455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ENSMUSG00000031600.12_40981406_40999656_1	chr8	+	1287	10	ISM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	16582	4142	1441	1598	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATCAAGAGTGCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	40981405	40999656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ENSMUSG00000031600.12_40989952_40999881_1	chr8	+	1302	8	ISM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	25128	3917	9987	1823	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGGAAACAGCAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	40989951	40999881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ENSMUSG00000031600.12_40993718_41000148_1	chr8	+	1315	6	ISM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	28894	3650	13753	2090	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTTAAAACTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	40993717	41000148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ENSMUSG00000031601.17_40945583_40953954_1	chr8	-	1992	4	ISM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	10841	2	10391	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTGTGACTGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	40953954	40945582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792
ENSMUSG00000031601.17_40946077_40964759_1	chr8	-	2083	7	FSM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	36	496	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGTGATTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	40964759	40946076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
ENSMUSG00000031604.11_65171173_65180753_1	chr8	-	1570	5	ISM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	6073	0	6073	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCTGTTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	65180753	65171172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657
ENSMUSG00000031604.11_65171173_65180942_1	chr8	-	1759	5	ISM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	5884	0	5884	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCTGTTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	65180942	65171172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657
ENSMUSG00000031604.11_65171484_65186646_1	chr8	-	1553	6	FSM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	180	311	180	-311	multi-exon	FALSE	canonical	NA	NA	NA	NA	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGCATCTTGTAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	65186646	65171483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65186541
ENSMUSG00000031604.11_65171539_65186826_1	chr8	-	1678	6	FSM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	0	366	0	-366	multi-exon	FALSE	canonical	NA	NA	NA	NA	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACCAGGTTAGGACTAT	NA	NA	NA	NA	NA	NA	NA	NA	65186826	65171538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65186541
ENSMUSG00000031609.4_57935741_57940894_1	chr8	-	1173	4	NNC	ENSMUSG00000031609.4	novel	1178	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGCTTCAGCCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	57940894	57935740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_57936085_57938075_57938175_57938543_57938665_57940285
ENSMUSG00000031613.10_56747620_56773445_1	chr8	+	809	5	FSM	ENSMUSG00000031613.10	ENST00000542498.5	1166	5	141	216	0	176	multi-exon	TRUE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTATAAAATCTTAAAGACAA	NA	NA	NA	NA	NA	NA	NA	NA	56747619	56773445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_56747748_56747973_56748098_56751390_56751498_56760628_56760726_56773092
ENSMUSG00000031613.10_56747620_56773491_1	chr8	+	855	5	FSM	ENSMUSG00000031613.10	ENST00000542498.5	1166	5	141	170	0	-170	multi-exon	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCTCAGAAAACATATTT	NA	NA	NA	NA	NA	NA	NA	NA	56747619	56773491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_56747748_56747973_56748098_56751390_56751498_56760628_56760726_56773092
ENSMUSG00000031613.10_56747620_56773547_1	chr8	+	911	5	FSM	ENSMUSG00000031613.10	ENST00000542498.5	1166	5	141	114	0	-114	multi-exon	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCATCTTAAAGGAGATAC	NA	NA	NA	NA	NA	NA	NA	NA	56747619	56773547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_56747748_56747973_56748098_56751390_56751498_56760628_56760726_56773092
ENSMUSG00000031613.10_56747972_56773662_1	chr8	+	900	4	ISM	ENSMUSG00000031613.10	ENST00000542498.5	1166	5	493	-1	351	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATAAAAGCTTGTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	56747971	56773662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_56748098_56751390_56751498_56760628_56760726_56773092
ENSMUSG00000031613.10_56747972_56774079_1	chr8	+	1558	6	ISM	ENSMUSG00000031613.10	ENSMUST00000034026.10	1683	7	352	-1	351	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAATTGCCTATTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	56747971	56774079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_56748098_56751390_56751498_56760628_56760726_56770784_56770862_56772027_56772192_56773092
ENSMUSG00000031613.10_56747998_56772110_1	chr8	+	260	3	ISM	ENSMUSG00000031613.10	ENST00000422112.6	670	5	378	1159	377	-1159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAGAAGAAAATATGG	NA	NA	NA	NA	NA	NA	NA	NA	56747997	56772110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_56748098_56770784_56770862_56772027
ENSMUSG00000031613.10_56760669_56773197_1	chr8	+	239	3	ISM	ENSMUSG00000031613.10	ENST00000296521.11	1101	6	13048	464	13048	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCTCTCCATTACTCG	NA	NA	NA	NA	NA	NA	NA	NA	56760668	56773197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_56760726_56770784_56770862_56773092
ENSMUSG00000031613.10_56772027_56773151_1	chr8	+	224	2	ISM	ENSMUSG00000031613.10	ENST00000422112.6	670	5	24407	118	24406	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTATGAAGATCACGGCA	NA	NA	NA	NA	NA	NA	NA	NA	56772026	56773151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_56772192_56773092
ENSMUSG00000031616.8_78391656_78394068_1	chr8	-	207	2	ISM	ENSMUSG00000031616.8	ENST00000506066.1	949	5	52998	53	52998	-53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAACAACCACAACACGGA	NA	NA	NA	NA	NA	NA	NA	NA	78394068	78391655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_78391746_78393951
ENSMUSG00000031616.8_78391656_78451065_1	chr8	-	1154	7	FSM	ENSMUSG00000031616.8	ENST00000511804.5	1242	7	35	53	0	-53	multi-exon	FALSE	canonical	NA	NA	NA	NA	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAACAACCACAACACGGA	NA	NA	NA	NA	NA	NA	NA	NA	78451065	78391655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_78391746_78393951_78394061_78394427_78394562_78398145_78398299_78401541_78401741_78415697_78415826_78450724
ENSMUSG00000031616.8_78391707_78394457_1	chr8	-	178	3	ISM	ENSMUSG00000031616.8	ENST00000506066.1	949	5	52609	104	52609	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACCTCGGTCCCCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	78394457	78391706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_78391746_78393951_78394061_78394427
ENSMUSG00000031616.8_78394428_78398206_1	chr8	-	195	2	ISM	ENSMUSG00000031616.8	ENST00000506066.1	949	5	48860	2825	48860	-2825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGACTCATGGTGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	78398206	78394427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_78394562_78398145
ENSMUSG00000031616.8_78398188_78446713_1	chr8	-	168	2	ISM	ENSMUSG00000031616.8	ENST00000506066.1	949	5	353	6585	353	-6585	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCAGCTTGCGGATCGC	NA	NA	NA	NA	NA	NA	NA	NA	78446713	78398187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_78398299_78446656
ENSMUSG00000031616.8_78398230_78446773_1	chr8	-	186	2	ISM	ENSMUSG00000031616.8	ENST00000506066.1	949	5	293	6627	293	-6627	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCTACACCCTCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	78446773	78398229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_78398299_78446656
ENSMUSG00000031616.8_78398278_78446826_1	chr8	-	191	2	ISM	ENSMUSG00000031616.8	ENST00000506066.1	949	5	240	6675	240	-6675	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGCTCTTTGGGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	78446826	78398277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_78398299_78446656
ENSMUSG00000031617.17_78323113_78324488_1	chr8	-	748	2	ISM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	12794	502	12794	-502	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGAAACATCTGAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	78324488	78323112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_78323810_78324437
ENSMUSG00000031617.17_78323244_78325205_1	chr8	-	761	3	ISM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	12077	633	12077	-633	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGCAACAAAAACTTAT	NA	NA	NA	NA	NA	NA	NA	NA	78325205	78323243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_78323810_78324437_78324610_78325182
ENSMUSG00000031617.17_78323413_78326379_1	chr8	-	763	4	ISM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	10903	802	10903	-802	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAACAAAAACTTACTGACA	NA	NA	NA	NA	NA	NA	NA	NA	78326379	78323412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285
ENSMUSG00000031617.17_78323655_78331287_1	chr8	-	746	7	ISM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	5995	1044	5995	-1044	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTTCTTCACAGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	78331287	78323654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250
ENSMUSG00000031617.17_78323705_78331358_1	chr8	-	767	7	ISM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	5924	1094	5924	-1094	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTCAAAGGTACCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	78331358	78323704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250
ENSMUSG00000031617.17_78323769_78331396_1	chr8	-	741	7	ISM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	5886	1158	5886	-1158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGATCCAGATCATAATGA	NA	NA	NA	NA	NA	NA	NA	NA	78331396	78323768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250
ENSMUSG00000031617.17_78324536_78332970_1	chr8	-	754	8	ISM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	4312	1925	4312	-1925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGAAGCAGAGGAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	78332970	78324535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915
ENSMUSG00000031617.17_78325250_78336790_1	chr8	-	748	8	ISM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	492	2639	492	-2639	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCGTTATTTCAGAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	78336790	78325249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731
ENSMUSG00000031617.17_78326353_78336895_1	chr8	-	753	7	ISM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	387	3742	387	-3742	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTAGCCCTATACAACCT	NA	NA	NA	NA	NA	NA	NA	NA	78336895	78326352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731
ENSMUSG00000031617.17_78328111_78337026_1	chr8	-	771	6	ISM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	256	5500	256	-5500	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGAAACTTTGGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	78337026	78328110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731
ENSMUSG00000031617.17_78331359_78337282_1	chr8	-	817	4	ISM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	0	8748	0	-8748	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTATCTGACAATCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	78337282	78331358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_78331457_78332792_78332830_78332915_78333047_78336731
ENSMUSG00000031618.14_77628975_77636112_1	chr8	+	1408	2	ISM	ENSMUSG00000031618.14	ENSMUST00000109911.8	3804	8	-129	334180	59	-333047	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCAGCAGTTCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	77628974	77636112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77629169_77634898
ENSMUSG00000031618.14_77628975_77636170_1	chr8	+	1466	2	ISM	ENSMUSG00000031618.14	ENSMUST00000109911.8	3804	8	-129	334122	59	-332989	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTACCAATAAAGCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	77628974	77636170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77629169_77634898
ENSMUSG00000031618.14_77629104_77636233_1	chr8	+	1400	2	ISM	ENSMUSG00000031618.14	ENSMUST00000109911.8	3804	8	0	334059	0	-332926	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGTCAACCCATTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	77629103	77636233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77629169_77634898
ENSMUSG00000031618.14_77635303_77812211_1	chr8	+	1411	2	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	402	156948	402	-156948	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGATGAGGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	77635302	77812211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77636658_77812155
ENSMUSG00000031618.14_77635406_77881865_1	chr8	+	1439	3	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	505	87294	505	-87294	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTATTGATAAGATTCG	NA	NA	NA	NA	NA	NA	NA	NA	77635405	77881865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77636658_77812155_77812308_77881830
ENSMUSG00000031618.14_77635465_77881912_1	chr8	+	1427	3	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	564	87247	564	-87247	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAATGCCTCCAAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	77635464	77881912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77636658_77812155_77812308_77881830
ENSMUSG00000031618.14_77635545_77881953_1	chr8	+	1388	3	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	644	87206	644	-87206	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGCTTAGCTGATAT	NA	NA	NA	NA	NA	NA	NA	NA	77635544	77881953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77636658_77812155_77812308_77881830
ENSMUSG00000031618.14_77635675_77912501_1	chr8	+	1349	4	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	774	56658	774	-56658	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATACATTGCTCCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	77635674	77912501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77636658_77812155_77812308_77881830_77881948_77912404
ENSMUSG00000031618.14_77635915_77914199_1	chr8	+	1402	5	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	1014	54960	1014	-54960	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGTCTATCATCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	77635914	77914199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77636658_77812155_77812308_77881830_77881948_77912404_77912744_77914148
ENSMUSG00000031618.14_77636019_77937309_1	chr8	+	1429	6	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	1118	31850	1118	-31850	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGGATGCGGCAGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	77636018	77937309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77636658_77812155_77812308_77881830_77881948_77912404_77912744_77914148_77914294_77937272
ENSMUSG00000031618.14_77636076_77937360_1	chr8	+	1423	6	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	1175	31799	1175	-31799	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGTACTCCATAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	77636075	77937360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77636658_77812155_77812308_77881830_77881948_77912404_77912744_77914148_77914294_77937272
ENSMUSG00000031618.14_77636193_77944120_1	chr8	+	1413	7	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	1292	25039	1292	-25039	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAGGAAAATGGTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	77636192	77944120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77636658_77812155_77812308_77881830_77881948_77912404_77912744_77914148_77914294_77937272_77937404_77944056
ENSMUSG00000031618.14_77636242_77944173_1	chr8	+	1417	7	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	1341	24986	1341	-24986	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCTACCAACTGACGAAG	NA	NA	NA	NA	NA	NA	NA	NA	77636241	77944173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77636658_77812155_77812308_77881830_77881948_77912404_77912744_77914148_77914294_77937272_77937404_77944056
ENSMUSG00000031618.14_77636355_77969159_1	chr8	+	1501	8	FSM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	1454	0	1454	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGATGCCGGCCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	77636354	77969159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_77636658_77812155_77812308_77881830_77881948_77912404_77912744_77914148_77914294_77937272_77937404_77944056_77944215_77969003
ENSMUSG00000031618.14_77636427_77969159_1	chr8	+	1429	8	FSM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	1526	0	1526	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGATGCCGGCCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	77636426	77969159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_77636658_77812155_77812308_77881830_77881948_77912404_77912744_77914148_77914294_77937272_77937404_77944056_77944215_77969003
ENSMUSG00000031618.14_77636485_77969207_1	chr8	+	1419	8	FSM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	1584	-48	1584	48	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTACAACTACGAAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	77636484	77969207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_77636658_77812155_77812308_77881830_77881948_77912404_77912744_77914148_77914294_77937272_77937404_77944056_77944215_77969003
ENSMUSG00000031618.14_77812154_77969440_1	chr8	+	1481	7	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	177253	-281	177253	281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATTTTGATATTTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	77812153	77969440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77812308_77881830_77881948_77912404_77912744_77914148_77914294_77937272_77937404_77944056_77944215_77969003
ENSMUSG00000031618.14_77881827_77969625_1	chr8	+	1516	6	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	246926	-466	246926	466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCATACACAAAAATACATAC	NA	NA	NA	NA	NA	NA	NA	NA	77881826	77969625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77881948_77912404_77912744_77914148_77914294_77937272_77937404_77944056_77944215_77969003
ENSMUSG00000031618.14_77912504_77969763_1	chr8	+	1434	5	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	277603	-604	277603	-529	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGATGTTAAATGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	77912503	77969763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77912744_77914148_77914294_77937272_77937404_77944056_77944215_77969003
ENSMUSG00000031618.14_77914148_77969957_1	chr8	+	1389	4	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	279247	-798	279247	-335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTTTTGAAAGAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	77914147	77969957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77914294_77937272_77937404_77944056_77944215_77969003
ENSMUSG00000031618.14_77914167_77970045_1	chr8	+	1458	4	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	279266	-886	279266	-247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCATGCGTACTGAACC	NA	NA	NA	NA	NA	NA	NA	NA	77914166	77970045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77914294_77937272_77937404_77944056_77944215_77969003
ENSMUSG00000031618.14_77914242_77970078_1	chr8	+	1416	4	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	279341	-919	279341	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAAAGGGAAAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	77914241	77970078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77914294_77937272_77937404_77944056_77944215_77969003
ENSMUSG00000031618.14_77937317_77970182_1	chr8	+	1424	3	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	302416	-1023	302416	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTCTACTTTTTCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	77937316	77970182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77937404_77944056_77944215_77969003
ENSMUSG00000031618.14_77937374_77970292_1	chr8	+	1477	3	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	302473	-1133	302473	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGCTGCAGCATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	77937373	77970292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_77937404_77944056_77944215_77969003
ENSMUSG00000031622.17_73449913_73466535_1	chr8	+	1016	7	NNC	ENSMUSG00000031622.17	novel	1024	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATGTGCAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	73449912	73466535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459981_73460117_73465996_73466117_73466357
ENSMUSG00000031622.17_73449913_73466535_2	chr8	+	1018	7	NNC	ENSMUSG00000031622.17	novel	1024	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATGTGCAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	73449912	73466535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73466003_73466117_73466357
ENSMUSG00000031622.17_73449913_73466535_3	chr8	+	1019	7	NNC	ENSMUSG00000031622.17	novel	1024	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATGTGCAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	73449912	73466535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_73450031_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73466357
ENSMUSG00000031622.17_73449913_73466535_4	chr8	+	1018	7	NNC	ENSMUSG00000031622.17	novel	1024	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATGTGCAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	73449912	73466535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460110_73465996_73466117_73466357
ENSMUSG00000031626.19_46216145_46245981_1	chr8	+	841	9	ISM	ENSMUSG00000031626.19	ENST00000393528.7	2860	23	135379	33013	17393	14593	internal_fragment	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTCTCCCTCGAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	46216144	46245981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46216229_46222865_46222933_46223582_46223628_46225570_46225746_46228625_46228741_46236579_46236664_46238305_46238363_46243012_46243063_46245817
ENSMUSG00000031628.10_47082802_47089298_1	chr8	+	527	5	ISM	ENSMUSG00000031628.10	ENSMUST00000093517.7	1520	7	12372	2454	20	-1897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTGCCAGAAGATACCGG	NA	NA	NA	NA	NA	NA	NA	NA	47082801	47089298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236
ENSMUSG00000031628.10_47085352_47091001_1	chr8	+	599	5	ISM	ENSMUSG00000031628.10	ENSMUST00000093517.7	1520	7	14922	751	2570	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTGCAGCATGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	47085351	47091001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
ENSMUSG00000031628.10_47087232_47091001_1	chr8	+	351	3	ISM	ENSMUSG00000031628.10	ENST00000517513.5	722	5	4450	194	4450	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTGCAGCATGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	47087231	47091001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_47087359_47088411_47088588_47090953
ENSMUSG00000031628.10_47087232_47091098_1	chr8	+	564	4	NNC	ENSMUSG00000031628.10	novel	2601	7	NA	NA	4450	-97	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGGACTCCACTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	47087231	47091098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_47087362_47088419_47088588_47089236_47089358_47090953
ENSMUSG00000031628.10_47087291_47091195_1	chr8	+	610	4	ISM	ENSMUSG00000031628.10	ENSMUST00000093517.7	1520	7	16861	557	4509	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGGGGGGGGCGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	47087290	47091195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_47087362_47088411_47088588_47089236_47089358_47090953
ENSMUSG00000031629.15_47005063_47021678_1	chr8	+	687	7	ISM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	0	11364	0	-9725	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAAGAGACCAAGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	47005062	47021678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644
ENSMUSG00000031629.15_47009179_47025865_1	chr8	+	700	7	ISM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	4116	7177	4057	-5538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTCTTGTATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	47009178	47025865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786
ENSMUSG00000031629.15_47015590_47031403_1	chr8	+	730	8	ISM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	10527	1639	10468	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGAGCCTCCTGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	47015589	47031403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ENSMUSG00000031629.15_47023023_47031562_1	chr8	+	711	6	ISM	ENSMUSG00000031629.15	ENSMUST00000093518.5	783	9	17901	-159	17901	159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATTTTTGAGTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	47023022	47031562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ENSMUSG00000031629.15_47029351_47031930_1	chr8	+	708	2	ISM	ENSMUSG00000031629.15	ENSMUST00000093518.5	783	9	24229	-527	24229	527	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTATGTATGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	47029350	47031930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_47029418_47031289
ENSMUSG00000031633.5_46659834_46662488_1	chr8	-	1395	3	ISM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	1833	0	1833	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAGTTTGGGCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	46662488	46659833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_46660658_46661434_46661576_46662058
ENSMUSG00000031633.5_46660059_46663955_1	chr8	-	1334	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	366	225	366	-225	multi-exon	FALSE	canonical	NA	NA	NA	NA	6287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGCTTGCTGAAGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	46663955	46660058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
ENSMUSG00000031633.5_46660145_46664067_1	chr8	-	1360	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	254	311	254	-311	multi-exon	FALSE	canonical	NA	NA	NA	NA	6884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACGTTTGTCAGCGACTC	NA	NA	NA	NA	NA	NA	NA	NA	46664067	46660144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
ENSMUSG00000031633.5_46660279_46664152_1	chr8	-	1311	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	169	445	169	-445	multi-exon	FALSE	canonical	NA	NA	NA	NA	5065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATTAACTGAAGAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	46664152	46660278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
ENSMUSG00000031633.5_46660346_46664321_1	chr8	-	1413	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	0	512	0	-512	multi-exon	FALSE	canonical	NA	NA	NA	NA	4182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTTGTATTTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	46664321	46660345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
ENSMUSG00000031634.14_46428565_46444949_1	chr8	+	1056	8	ISM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	0	5046	0	-5046	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGATGTGCCATTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	46428564	46444949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784
ENSMUSG00000031634.14_46432312_46445188_1	chr8	+	973	8	ISM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	3747	4807	3747	-4807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCAGTGGATTGGGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	46432311	46445188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144
ENSMUSG00000031634.14_46433350_46445269_1	chr8	+	1035	7	ISM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	4785	4726	4785	-4726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATGCTTTGTAAACC	NA	NA	NA	NA	NA	NA	NA	NA	46433349	46445269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144
ENSMUSG00000031634.14_46433471_46447090_1	chr8	+	953	8	ISM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	4906	2905	4906	-2905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCATTTCCAGAATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	46433470	46447090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051
ENSMUSG00000031634.14_46433610_46448699_1	chr8	+	1057	8	ISM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	5045	1296	5045	-1296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTCACTCTCCCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	46433609	46448699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574
ENSMUSG00000031634.14_46436568_46449754_1	chr8	+	998	8	ISM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	8003	241	8003	-241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTCCAGACTTTTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	46436567	46449754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ENSMUSG00000031634.14_46436657_46449894_1	chr8	+	1049	8	ISM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	8092	101	8092	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTAGCTGTGATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	46436656	46449894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ENSMUSG00000031634.14_46436679_46449894_1	chr8	+	1027	8	ISM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	8114	101	8114	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTAGCTGTGATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	46436678	46449894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ENSMUSG00000031634.14_46438357_46449995_1	chr8	+	898	6	ISM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	9792	0	9792	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTAGTCATGTAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	46438356	46449995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ENSMUSG00000031636.8_46338557_46370606_1	chr8	+	813	6	ISM	ENSMUSG00000031636.8	ENST00000629667.2	953	7	-50	1445	0	-1445	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTCTCGCTTTTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	46338556	46370606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46338710_46353511_46353597_46362055_46362124_46366733_46366998_46368165_46368297_46370494
ENSMUSG00000031636.8_46338557_46371881_1	chr8	+	841	7	FSM	ENSMUSG00000031636.8	ENSMUST00000034053.7	1604	7	59	704	0	-170	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATAAGTACCGGCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	46338556	46371881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_46338710_46349784_46349937_46353511_46353597_46361505_46361694_46368165_46368297_46370494_46370607_46371861
ENSMUSG00000031636.8_46338557_46371944_1	chr8	+	904	7	FSM	ENSMUSG00000031636.8	ENSMUST00000034053.7	1604	7	59	641	0	-107	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTACTTCTTCGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	46338556	46371944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_46338710_46349784_46349937_46353511_46353597_46361505_46361694_46368165_46368297_46370494_46370607_46371861
ENSMUSG00000031636.8_46338671_46372003_1	chr8	+	849	7	FSM	ENSMUSG00000031636.8	ENSMUST00000034053.7	1604	7	173	582	64	-48	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCCCAGAGGGCTACGA	NA	NA	NA	NA	NA	NA	NA	NA	46338670	46372003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_46338710_46349784_46349937_46353511_46353597_46361505_46361694_46368165_46368297_46370494_46370607_46371861
ENSMUSG00000031636.8_46338686_46371910_1	chr8	+	733	7	FSM	ENSMUSG00000031636.8	ENST00000629667.2	953	7	79	141	79	-141	multi-exon	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGCCGACTGTAACCT	NA	NA	NA	NA	NA	NA	NA	NA	46338685	46371910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_46338710_46353511_46353597_46362055_46362124_46366733_46366998_46368165_46368297_46370494_46370607_46371861
ENSMUSG00000031636.8_46349847_46368241_1	chr8	+	319	4	ISM	ENSMUSG00000031636.8	ENST00000620787.5	852	7	11240	3821	11240	-3810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGCCAGTCGGGCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	46349846	46368241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46349937_46353511_46353597_46362055_46362124_46368165
ENSMUSG00000031636.8_46349848_46368244_1	chr8	+	316	4	NNC	ENSMUSG00000031636.8	novel	852	7	NA	NA	11241	-3807	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCAGTCGGGCTCCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	46349847	46368244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_46349937_46353516_46353597_46362055_46362124_46368165
ENSMUSG00000031636.8_46349923_46370537_1	chr8	+	341	5	ISM	ENSMUSG00000031636.8	ENST00000620787.5	852	7	11316	1525	11316	-1514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTCCACGGTGGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	46349922	46370537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46349937_46353511_46353597_46362055_46362124_46368165_46368297_46370494
ENSMUSG00000031636.8_46353511_46370606_1	chr8	+	397	4	ISM	ENSMUSG00000031636.8	ENST00000620787.5	852	7	14904	1456	14904	-1445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTCTCGCTTTTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	46353510	46370606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46353597_46362055_46362124_46368165_46368297_46370494
ENSMUSG00000031636.8_46361555_46372292_1	chr8	+	813	4	ISM	ENSMUSG00000031636.8	ENSMUST00000034053.7	1604	7	23057	293	22948	-83	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGACATTTAAAGCAATA	NA	NA	NA	NA	NA	NA	NA	NA	46361554	46372292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46361694_46368165_46368297_46370494_46370607_46371861
ENSMUSG00000031636.8_46361613_46372395_1	chr8	+	858	4	ISM	ENSMUSG00000031636.8	ENSMUST00000034053.7	1604	7	23115	190	23006	20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAAGTTGCTTTTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	46361612	46372395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46361694_46368165_46368297_46370494_46370607_46371861
ENSMUSG00000031636.8_46362093_46371908_1	chr8	+	321	4	ISM	ENSMUSG00000031636.8	ENST00000620787.5	852	7	23486	154	23486	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTGCCGACTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	46362092	46371908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46362124_46368165_46368297_46370494_46370607_46371861
ENSMUSG00000031636.8_46368209_46371981_1	chr8	+	320	3	ISM	ENSMUSG00000031636.8	ENST00000629667.2	953	7	29602	70	29602	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCACGCGAGAGCCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	46368208	46371981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46368297_46370494_46370607_46371861
ENSMUSG00000031636.8_46370494_46372585_1	chr8	+	837	2	ISM	ENSMUSG00000031636.8	ENSMUST00000034053.7	1604	7	31996	0	31887	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGTGAAGTAGTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	46370493	46372585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_46370607_46371861
ENSMUSG00000031641.15_61943015_61957440_1	chr8	+	1723	4	ISM	ENSMUSG00000031641.15	ENSMUST00000034058.14	4309	5	2247	2288	2247	-2288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTGAGTGTGCGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	61943014	61957440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_61943095_61944578_61944713_61948101_61948237_61956066
ENSMUSG00000031645.5_45694475_45701697_1	chr8	-	851	6	ISM	ENSMUSG00000031645.5	ENST00000264692.8	1394	10	1508	-2	1508	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATCACTTTGTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	45701697	45694474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_45694647_45695253_45695394_45695902_45695999_45698665_45698842_45699783_45699944_45701590
ENSMUSG00000031645.5_45694595_45701811_1	chr8	-	762	7	ISM	ENSMUSG00000031645.5	ENST00000264692.8	1394	10	1394	118	1394	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATCACAAGCTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	45701811	45694594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_45694647_45695253_45695394_45695902_45695999_45698665_45698842_45699783_45699944_45701590_45701698_45701780
ENSMUSG00000031645.5_45695253_45701945_1	chr8	-	845	6	ISM	ENSMUSG00000031645.5	ENST00000264692.8	1394	10	1260	776	1260	-776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCAGTCTCAAGCAATC	NA	NA	NA	NA	NA	NA	NA	NA	45701945	45695252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_45695394_45695902_45695999_45698665_45698842_45699783_45699944_45701590_45701698_45701780
ENSMUSG00000031645.5_45695358_45702076_1	chr8	-	767	7	ISM	ENSMUSG00000031645.5	ENST00000264692.8	1394	10	1129	881	1129	-881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGGTGTCAAATGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	45702076	45695357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_45695394_45695902_45695999_45698665_45698842_45699783_45699944_45701590_45701698_45701780_45701944_45702047
ENSMUSG00000031645.5_45695901_45702159_1	chr8	-	816	6	ISM	ENSMUSG00000031645.5	ENST00000264692.8	1394	10	1046	1424	1046	-1424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACCATGCCTTCTATC	NA	NA	NA	NA	NA	NA	NA	NA	45702159	45695900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_45695999_45698665_45698842_45699783_45699944_45701590_45701698_45701780_45701944_45702047
ENSMUSG00000031645.5_45695946_45702580_1	chr8	-	808	7	ISM	ENSMUSG00000031645.5	ENST00000264692.8	1394	10	625	1469	625	-1469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAATGCTGGGTGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	45702580	45695945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_45695999_45698665_45698842_45699783_45699944_45701590_45701698_45701780_45701944_45702047_45702158_45702541
ENSMUSG00000031645.5_45698746_45702666_1	chr8	-	761	6	ISM	ENSMUSG00000031645.5	ENST00000264692.8	1394	10	539	4269	539	-4269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCATGATCAGTATACGA	NA	NA	NA	NA	NA	NA	NA	NA	45702666	45698745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_45698842_45699783_45699944_45701590_45701698_45701780_45701944_45702047_45702158_45702541
ENSMUSG00000031645.5_45698819_45703127_1	chr8	-	757	7	ISM	ENSMUSG00000031645.5	ENST00000264692.8	1394	10	78	4342	78	-4342	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTACGGTGGCATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	45703127	45698818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_45698842_45699783_45699944_45701590_45701698_45701780_45701944_45702047_45702158_45702541_45702702_45703093
ENSMUSG00000031652.12_87570361_87587111_1	chr8	-	1391	7	ISM	ENSMUSG00000031652.12	ENST00000262384.4	3486	8	24708	98	24708	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTCTTCTCGGTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	87587111	87570360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_87570470_87570889_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053
ENSMUSG00000031652.12_87570427_87587155_1	chr8	-	1369	7	ISM	ENSMUSG00000031652.12	ENST00000262384.4	3486	8	24664	164	24664	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTCTACTTAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	87587155	87570426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_87570470_87570889_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053
ENSMUSG00000031652.12_87570947_87587292_1	chr8	-	1406	6	ISM	ENSMUSG00000031652.12	ENST00000262384.4	3486	8	24527	684	24527	-684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGGAGTTGCTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	87587292	87570946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053
ENSMUSG00000031652.12_87570947_87587356_1	chr8	-	1470	6	ISM	ENSMUSG00000031652.12	ENST00000262384.4	3486	8	24463	684	24463	-684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGGAGTTGCTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	87587356	87570946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053
ENSMUSG00000031652.12_87571104_87587436_1	chr8	-	1393	6	ISM	ENSMUSG00000031652.12	ENST00000262384.4	3486	8	24383	841	24383	-841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTTCTGCCTGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	87587436	87571103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053
ENSMUSG00000031652.12_87573462_87588033_1	chr8	-	1405	5	ISM	ENSMUSG00000031652.12	ENST00000262384.4	3486	8	23786	3199	23786	-3199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGAGGCCTTTCTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	87588033	87573461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053
ENSMUSG00000031652.12_87573517_87588101_1	chr8	-	1418	5	ISM	ENSMUSG00000031652.12	ENST00000262384.4	3486	8	23718	3254	23718	-3254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTCCTGATGACCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	87588101	87573516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053
ENSMUSG00000031652.12_87575161_87588225_1	chr8	-	1422	4	ISM	ENSMUSG00000031652.12	ENST00000262384.4	3486	8	23594	4898	23594	-4898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGGGGGTATAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	87588225	87575160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_87575183_87578252_87578350_87579786_87579918_87587053
ENSMUSG00000031652.12_87579875_87588429_1	chr8	-	1419	2	ISM	ENSMUSG00000031652.12	ENST00000262384.4	3486	8	23390	9612	23390	-9612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTGAGTATTTTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	87588429	87579874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_87579918_87587053
ENSMUSG00000031652.12_87587417_87611538_1	chr8	-	1411	2	ISM	ENSMUSG00000031652.12	ENST00000262384.4	3486	8	281	17154	281	-17154	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCTTCAGGGCACCAAC	NA	NA	NA	NA	NA	NA	NA	NA	87611538	87587416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_87588739_87611449
ENSMUSG00000031652.12_87587498_87611607_1	chr8	-	1399	2	ISM	ENSMUSG00000031652.12	ENST00000262384.4	3486	8	212	17235	212	-17235	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACTGTCGACCTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	87611607	87587497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_87588739_87611449
ENSMUSG00000031652.12_87587571_87611669_1	chr8	-	1388	2	ISM	ENSMUSG00000031652.12	ENST00000262384.4	3486	8	150	17308	150	-17308	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGTTAATTCTTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	87611669	87587570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_87588739_87611449
ENSMUSG00000031657.17_88864601_88876755_1	chr8	+	843	7	ISM	ENSMUSG00000031657.17	ENSMUST00000034079.14	3251	15	118	21900	117	-21870	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTCAGGCAGAAATCATT	NA	NA	NA	NA	NA	NA	NA	NA	88864600	88876755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719
ENSMUSG00000031657.17_88864707_88876794_1	chr8	+	776	7	ISM	ENSMUSG00000031657.17	ENSMUST00000034079.14	3251	15	224	21861	223	-21831	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGAAGTTCTGGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	88864706	88876794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719
ENSMUSG00000031657.17_88864707_88876834_1	chr8	+	816	7	ISM	ENSMUSG00000031657.17	ENSMUST00000034079.14	3251	15	224	21821	223	-21791	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGATGAAGGAAGCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	88864706	88876834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719
ENSMUSG00000031657.17_88865001_88876991_1	chr8	+	796	6	ISM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	517	21634	517	-21634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAGTGAGTCAGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	88865000	88876991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719
ENSMUSG00000031657.17_88866528_88883173_1	chr8	+	803	6	ISM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	2044	15452	2044	-15452	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGTCTGCTCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	88866527	88883173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089
ENSMUSG00000031657.17_88868298_88883455_1	chr8	+	890	6	ISM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	3814	15170	3814	-15170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTAGTTTCATCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	88868297	88883455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297
ENSMUSG00000031657.17_88871156_88883763_1	chr8	+	862	6	ISM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	6672	14862	6672	-14862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAAACTTTGGGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88871155	88883763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680
ENSMUSG00000031657.17_88874172_88884893_1	chr8	+	891	6	ISM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	9688	13732	9688	-13732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATTTAGACAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	88874171	88884893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756
ENSMUSG00000031657.17_88876783_88891549_1	chr8	+	807	7	ISM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	12299	7076	12299	-7076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGGCATTCATAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	88876782	88891549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515
ENSMUSG00000031657.17_88876945_88893673_1	chr8	+	805	8	ISM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	12461	4952	12461	-4952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAACAGGCGAGGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	88876944	88893673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623
ENSMUSG00000031657.17_88883337_88897530_1	chr8	+	793	7	ISM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	18853	1095	18853	-1095	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCTCGACAATGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	88883336	88897530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ENSMUSG00000031657.17_88883376_88897593_1	chr8	+	817	7	ISM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	18892	1032	18892	-1032	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTGACTTCTTAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	88883375	88897593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ENSMUSG00000031657.17_88883426_88897653_1	chr8	+	827	7	ISM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	18942	972	18942	-972	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGCTGGCACAACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	88883425	88897653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ENSMUSG00000031657.17_88884778_88897783_1	chr8	+	823	5	ISM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	20294	842	20294	-842	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTTTTCTTTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	88884777	88897783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ENSMUSG00000031657.17_88884849_88897822_1	chr8	+	791	5	ISM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	20365	803	20365	-803	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCTGGCCTGGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	88884848	88897822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ENSMUSG00000031657.17_88891596_88898060_1	chr8	+	815	3	ISM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	27112	565	27112	-565	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTGAGCTCTACCACTAA	NA	NA	NA	NA	NA	NA	NA	NA	88891595	88898060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_88891660_88893623_88893801_88897486
ENSMUSG00000031657.17_88893714_88898196_1	chr8	+	797	2	ISM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	29230	429	29230	-429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAGCCAATAAATATC	NA	NA	NA	NA	NA	NA	NA	NA	88893713	88898196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_88893801_88897486
ENSMUSG00000031659.14_89033228_89046872_1	chr8	+	1846	13	FSM	ENSMUSG00000031659.14	ENST00000566433.6	1850	13	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTGTGATGGGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	89033227	89046872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_89033399_89035268_89035473_89036319_89036488_89037161_89037312_89037626_89037776_89038827_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044702_89045426_89045508_89045701_89045775_89046773
ENSMUSG00000031659.14_89033308_89046841_1	chr8	+	1735	13	FSM	ENSMUSG00000031659.14	ENST00000566433.6	1850	13	84	31	84	-31	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTGTCCACCTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	89033307	89046841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_89033399_89035268_89035473_89036319_89036488_89037161_89037312_89037626_89037776_89038827_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044702_89045426_89045508_89045701_89045775_89046773
ENSMUSG00000031659.14_89035345_89048739_1	chr8	+	1698	14	ISM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	2121	6413	2121	1867	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGTACACTCCAGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	89035344	89048739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89035473_89036319_89036488_89037161_89037312_89037626_89037776_89038827_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044702_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724
ENSMUSG00000031659.14_89035411_89048789_1	chr8	+	1682	14	ISM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	2187	6363	2187	1917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTTGTCCTGGTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	89035410	89048789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89035473_89036319_89036488_89037161_89037312_89037626_89037776_89038827_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044702_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724
ENSMUSG00000031659.14_89036317_89049661_1	chr8	+	1783	14	ISM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	3093	5491	3093	2789	internal_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATGCTATCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	89036316	89049661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89036488_89037161_89037312_89037626_89037776_89038827_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044702_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562
ENSMUSG00000031659.14_89036446_89050306_1	chr8	+	1701	15	ISM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	3222	4846	3222	3434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCGGATGAGCCTAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	89036445	89050306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89036488_89037161_89037312_89037626_89037776_89038827_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044702_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259
ENSMUSG00000031659.14_89037224_89050453_1	chr8	+	1744	14	ISM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	4000	4699	4000	3581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTTCTGCAGCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	89037223	89050453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89037312_89037626_89037776_89038827_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044702_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259
ENSMUSG00000031659.14_89037715_89051436_1	chr8	+	1692	15	ISM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	4491	3716	4491	-3716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCACGAGGAGTTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	89037714	89051436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89037776_89038827_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044702_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050454_89051153_89051228_89051386
ENSMUSG00000031659.14_89038885_89051543_1	chr8	+	1681	14	ISM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	5661	3609	5661	-3609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGAAGGGCAGGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	89038884	89051543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044702_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050454_89051153_89051228_89051386
ENSMUSG00000031659.14_89038885_89052031_1	chr8	+	1717	15	ISM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	5661	3121	5661	-3121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCATCCGTTCCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	89038884	89052031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044702_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050454_89051153_89051228_89051386_89051543_89051994
ENSMUSG00000031659.14_89040715_89052141_1	chr8	+	1774	14	ISM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	7491	3011	7491	-3011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGCCTGGCCAGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	89040714	89052141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89040845_89042084_89042244_89042375_89042509_89044482_89044702_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050454_89051153_89051228_89051386_89051543_89051994
ENSMUSG00000031659.14_89042085_89052829_1	chr8	+	1750	14	ISM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	8861	2323	8861	-2323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCCAGGCCTGTGTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	89042084	89052829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89042244_89042375_89042509_89044482_89044702_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050454_89051153_89051228_89051386_89051543_89051994_89052142_89052723
ENSMUSG00000031659.14_89042189_89053057_1	chr8	+	1684	15	ISM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	8965	2095	8965	-2095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGCATGGCCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	89042188	89053057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89042244_89042375_89042509_89044482_89044702_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050454_89051153_89051228_89051386_89051543_89051994_89052142_89052723_89052829_89053018
ENSMUSG00000031659.14_89042461_89054051_1	chr8	+	1671	15	ISM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	9237	1101	9237	-1101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGACATCTGGGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	89042460	89054051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89042509_89044482_89044702_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050454_89051153_89051228_89051386_89051543_89051994_89052142_89052723_89052829_89053018_89053134_89054000
ENSMUSG00000031659.14_89044549_89054344_1	chr8	+	1676	15	ISM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	11325	808	11325	-808	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGCCGTGGGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	89044548	89054344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89044702_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050454_89051153_89051228_89051386_89051543_89051994_89052142_89052723_89052829_89053018_89053134_89054000_89054126_89054299
ENSMUSG00000031659.14_89044602_89054395_1	chr8	+	1674	15	ISM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	11378	757	11378	-757	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGTATGTACAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	89044601	89054395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89044702_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050454_89051153_89051228_89051386_89051543_89051994_89052142_89052723_89052829_89053018_89053134_89054000_89054126_89054299
ENSMUSG00000031659.14_89044651_89054452_1	chr8	+	1682	15	ISM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	11427	700	11427	-700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCAGCCTCCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	89044650	89054452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89044702_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050454_89051153_89051228_89051386_89051543_89051994_89052142_89052723_89052829_89053018_89053134_89054000_89054126_89054299
ENSMUSG00000031659.14_89045470_89054607_1	chr8	+	1743	14	ISM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	12246	545	12246	-545	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTACAGTTCCAAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	89045469	89054607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050454_89051153_89051228_89051386_89051543_89051994_89052142_89052723_89052829_89053018_89053134_89054000_89054126_89054299
ENSMUSG00000031659.14_89050259_89055152_1	chr8	+	1770	8	ISM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	17035	0	17035	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAAAGCTTTGAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	89050258	89055152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89050454_89051153_89051228_89051386_89051543_89051994_89052142_89052723_89052829_89053018_89053134_89054000_89054126_89054299
ENSMUSG00000031660.14_89058785_89060844_1	chr8	-	787	4	ISM	ENSMUSG00000031660.14	ENST00000394689.2	2141	17	27743	-154	27743	154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGAACAATTATAAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	89060844	89058784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732
ENSMUSG00000031660.14_89059028_89073546_1	chr8	-	1202	11	ISM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	15276	1341	15041	-89	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTAATTAAGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	89073546	89059027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501
ENSMUSG00000031660.14_89059068_89073621_1	chr8	-	1237	11	ISM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	15201	1381	14966	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGGTGCTTTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	89073621	89059067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501
ENSMUSG00000031660.14_89059141_89073650_1	chr8	-	1193	11	ISM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	15172	1454	14937	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGGGCCTGACGCGA	NA	NA	NA	NA	NA	NA	NA	NA	89073650	89059140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501
ENSMUSG00000031660.14_89059514_89078538_1	chr8	-	1304	11	ISM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	10284	1827	10049	-575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGTAGGTGCCCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	89078538	89059513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427
ENSMUSG00000031660.14_89060423_89081339_1	chr8	-	1191	11	ISM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	7483	2736	7248	-1484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCCTCCCAATATGATC	NA	NA	NA	NA	NA	NA	NA	NA	89081339	89060422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256
ENSMUSG00000031660.14_89060801_89084595_1	chr8	-	1224	12	ISM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	4227	3114	3992	-1862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGGCTCACAGCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	89084595	89060800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527
ENSMUSG00000031660.14_89066088_89088192_1	chr8	-	1197	11	ISM	ENSMUSG00000031660.14	ENST00000394689.2	2141	17	395	7149	395	-7149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTCTAACAAAAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	89088192	89066087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129
ENSMUSG00000031660.14_89066134_89088254_1	chr8	-	1213	11	ISM	ENSMUSG00000031660.14	ENST00000394689.2	2141	17	333	7195	333	-7195	internal_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCACATGCCAAGATTACC	NA	NA	NA	NA	NA	NA	NA	NA	89088254	89066133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129
ENSMUSG00000031660.14_89069363_89088338_1	chr8	-	1282	10	ISM	ENSMUSG00000031660.14	ENST00000394689.2	2141	17	249	10424	249	-10424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCCCCCAGTTAATACC	NA	NA	NA	NA	NA	NA	NA	NA	89088338	89069362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129
ENSMUSG00000031660.14_89069479_89088642_1	chr8	-	1275	11	ISM	ENSMUSG00000031660.14	ENST00000394689.2	2141	17	-55	10540	-55	-10540	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTACAGTTCTTATGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	89088642	89069478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ENSMUSG00000031665.8_89755261_89769038_1	chr8	-	245	2	FSM	ENSMUSG00000031665.8	ENST00000566102.1	520	2	17	258	17	-258	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCAACGGGCTGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	89769038	89755260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_89755447_89768979
ENSMUSG00000031667.17_91850197_91856379_1	chr8	-	1779	8	NNC	ENSMUSG00000031667.17	novel	2079	10	NA	NA	54	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCTGTTAAATAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	91856379	91850196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852831_91852915_91853301_91853403_91853492_91853558_91856227
ENSMUSG00000031667.17_91850197_91856379_2	chr8	-	1785	8	ISM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	4276	0	54	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCTGTTAAATAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	91856379	91850196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227
ENSMUSG00000031667.17_91850197_91856433_1	chr8	-	1839	8	ISM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	4222	0	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCTGTTAAATAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	91856433	91850196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227
ENSMUSG00000031667.17_91851097_91860545_1	chr8	-	1069	10	FSM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	110	900	80	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTGGCTATCAGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	91860545	91851096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
ENSMUSG00000031667.17_91851208_91856433_1	chr8	-	828	8	ISM	ENSMUSG00000031667.17	ENSMUST00000109609.9	1171	10	4218	111	0	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACCTAAGAGATGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	91856433	91851207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227
ENSMUSG00000031667.17_91851208_91860651_1	chr8	-	1064	10	FSM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	4	1011	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACCTAAGAGATGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	91860651	91851207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
ENSMUSG00000031669.11_96360081_96370913_1	chr8	+	1744	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	0	775	0	523	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTGCGGATTGAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	96360080	96370913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_96360412_96364437_96364672_96369734
ENSMUSG00000031669.11_96360182_96370330_1	chr8	+	826	2	FSM	ENSMUSG00000031669.11	ENST00000328514.11	845	2	-41	60	0	-60	multi-exon	TRUE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGCTTATTTGCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	96360181	96370330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_96360412_96369734
ENSMUSG00000031669.11_96360182_96370995_1	chr8	+	1725	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	101	693	0	605	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTTCAGCTAAAGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	96360181	96370995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_96360412_96364437_96364672_96369734
ENSMUSG00000031669.11_96360305_96370330_1	chr8	+	703	2	FSM	ENSMUSG00000031669.11	ENST00000328514.11	845	2	82	60	82	-60	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGCTTATTTGCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	96360304	96370330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_96360412_96369734
ENSMUSG00000031669.11_96360330_96371094_1	chr8	+	1676	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	249	594	107	-594	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATGGCCTAATGTACAA	NA	NA	NA	NA	NA	NA	NA	NA	96360329	96371094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_96360412_96364437_96364672_96369734
ENSMUSG00000031669.11_96360357_96370390_1	chr8	+	711	2	FSM	ENSMUSG00000031669.11	ENST00000328514.11	845	2	134	0	134	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTACCTGCTGGGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	96360356	96370390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_96360412_96369734
ENSMUSG00000031669.11_96364479_96371214_1	chr8	+	1673	2	ISM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	4398	474	4256	-474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCCAACCTTTGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	96364478	96371214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_96364672_96369734
ENSMUSG00000031669.11_96364530_96371267_1	chr8	+	1675	2	ISM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	4449	421	4307	-421	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGAAAAACAGCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	96364529	96371267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_96364672_96369734
ENSMUSG00000031669.11_96364591_96371326_1	chr8	+	1673	2	ISM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	4510	362	4368	-362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGGAAATACTGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	96364590	96371326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_96364672_96369734
ENSMUSG00000031671.12_96442509_96445147_1	chr8	+	1216	7	FSM	ENSMUSG00000031671.12	ENSMUST00000034096.6	1707	7	0	491	0	-491	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGATGGGGAGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	96442508	96445147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
ENSMUSG00000031671.12_96442790_96445238_1	chr8	+	1026	7	FSM	ENSMUSG00000031671.12	ENSMUST00000034096.6	1707	7	281	400	281	-400	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGTTCTGTTGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	96442789	96445238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
ENSMUSG00000031671.12_96442979_96445499_1	chr8	+	1180	6	ISM	ENSMUSG00000031671.12	ENSMUST00000034096.6	1707	7	470	139	470	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAAAAATAGCTAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	96442978	96445499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_96443123_96443234_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
ENSMUSG00000031671.12_96443239_96445638_1	chr8	+	1171	5	ISM	ENSMUSG00000031671.12	ENSMUST00000034096.6	1707	7	730	0	730	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAACTTTCTTTAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	96443238	96445638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
ENSMUSG00000031672.9_96590762_96615020_1	chr8	-	2370	10	NNC	ENSMUSG00000031672.9	novel	2530	10	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTGCTTTTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	96615020	96590761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_96591880_96593448_96593600_96596099_96596261_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000031672.9_96590762_96615020_2	chr8	-	2375	10	FSM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	155	0	-64	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTGCTTTTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	96615020	96590761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000031672.9_96590762_96615020_3	chr8	-	2369	10	NNC	ENSMUSG00000031672.9	novel	2530	10	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTGCTTTTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	96615020	96590761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598524_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000031672.9_96590762_96615020_4	chr8	-	2370	10	NNC	ENSMUSG00000031672.9	novel	2530	10	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTGCTTTTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	96615020	96590761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598961_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000031672.9_96590762_96615020_5	chr8	-	2367	10	NNC	ENSMUSG00000031672.9	novel	2310	10	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTGCTTTTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	96615020	96590761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_96591876_96593444_96593592_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000031672.9_96590762_96615020_6	chr8	-	2369	10	NNC	ENSMUSG00000031672.9	novel	2530	10	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTGCTTTTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	96615020	96590761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597548_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000031672.9_96590762_96615020_7	chr8	-	2370	10	NNC	ENSMUSG00000031672.9	novel	2530	10	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTGCTTTTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	96615020	96590761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_96591880_96593448_96593600_96596099_96596266_96597407_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000031673.7_103358727_103396804_1	chr8	-	4087	9	ISM	ENSMUSG00000031673.7	ENST00000566827.5	2340	11	50361	-2163	50361	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATCTTTTGTCATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	103396804	103358726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_103361443_103363559_103363812_103374094_103374213_103374429_103374564_103377254_103377392_103384820_103385075_103391235_103391424_103394629_103394798_103396684
ENSMUSG00000031673.7_103358890_103400526_1	chr8	-	4007	10	ISM	ENSMUSG00000031673.7	ENST00000566827.5	2340	11	46639	-2000	46639	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATAGGAATGTAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	103400526	103358889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_103361443_103363559_103363812_103374094_103374213_103374429_103374564_103377254_103377392_103384820_103385075_103391235_103391424_103394629_103394798_103396684_103396805_103400443
ENSMUSG00000031673.7_103358960_103400621_1	chr8	-	4032	10	ISM	ENSMUSG00000031673.7	ENST00000566827.5	2340	11	46544	-1930	46544	-233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAATAACTCAAAAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	103400621	103358959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_103361443_103363559_103363812_103374094_103374213_103374429_103374564_103377254_103377392_103384820_103385075_103391235_103391424_103394629_103394798_103396684_103396805_103400443
ENSMUSG00000031673.7_103359325_103406463_1	chr8	-	4004	11	ISM	ENSMUSG00000031673.7	ENSMUST00000075190.5	5647	13	105811	598	40702	-598	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCACACTGCAAACACTT	NA	NA	NA	NA	NA	NA	NA	NA	103406463	103359324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_103361443_103363559_103363812_103374094_103374213_103374429_103374564_103377254_103377392_103384820_103385075_103391235_103391424_103394629_103394798_103396684_103396805_103400443_103400739_103406243
ENSMUSG00000031673.7_103359559_103447153_1	chr8	-	4059	12	ISM	ENSMUSG00000031673.7	ENSMUST00000075190.5	5647	13	65121	832	12	-832	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGCAATTCACTCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	103447153	103359558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_103361443_103363559_103363812_103374094_103374213_103374429_103374564_103377254_103377392_103384820_103385075_103391235_103391424_103394629_103394798_103396684_103396805_103400443_103400739_103406243_103406644_103447044
ENSMUSG00000031673.7_103359710_103511647_1	chr8	-	4037	13	FSM	ENSMUSG00000031673.7	ENSMUST00000075190.5	5647	13	627	983	627	-983	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGTGCAGAGTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	103511647	103359709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_103361443_103363559_103363812_103374094_103374213_103374429_103374564_103377254_103377392_103384820_103385075_103391235_103391424_103394629_103394798_103396684_103396805_103400443_103400739_103406243_103406644_103447044_103447163_103511527
ENSMUSG00000031673.7_103360055_103512003_1	chr8	-	4048	13	FSM	ENSMUSG00000031673.7	ENSMUST00000075190.5	5647	13	271	1328	271	835	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAATTTAATTGTGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	103512003	103360054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_103361443_103363559_103363812_103374094_103374213_103374429_103374564_103377254_103377392_103384820_103385075_103391235_103391424_103394629_103394798_103396684_103396805_103400443_103400739_103406243_103406644_103447044_103447163_103511527
ENSMUSG00000031673.7_103360138_103512088_1	chr8	-	4050	13	FSM	ENSMUSG00000031673.7	ENSMUST00000075190.5	5647	13	186	1411	186	752	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAAAAAGATTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	103512088	103360137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_103361443_103363559_103363812_103374094_103374213_103374429_103374564_103377254_103377392_103384820_103385075_103391235_103391424_103394629_103394798_103396684_103396805_103400443_103400739_103406243_103406644_103447044_103447163_103511527
ENSMUSG00000031673.7_103384868_103447115_1	chr8	-	1049	6	ISM	ENSMUSG00000031673.7	ENST00000566827.5	2340	11	50	23978	50	-23978	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGAGTACATGCCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	103447115	103384867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_103385075_103391235_103391424_103394629_103394798_103396684_103396805_103400443_103400739_103447044
ENSMUSG00000031683.17_79532613_79536643_1	chr8	-	2330	2	ISM	ENSMUSG00000031683.17	ENSMUST00000146824.2	541	3	3200	-2074	3200	467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGATGACAGCATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	79536643	79532612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_79534875_79536575
ENSMUSG00000031683.17_79532776_79546631_1	chr8	-	2334	4	ISM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	1138	1282	1138	304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCTAATGATGTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	79546631	79532775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615
ENSMUSG00000031683.17_79532908_79547769_1	chr8	-	2378	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	0	1414	0	172	multi-exon	FALSE	canonical	NA	NA	NA	NA	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAAACAGAGCTGTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	79547769	79532907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
ENSMUSG00000031684.12_79236204_79245966_1	chr8	+	433	3	FSM	ENSMUSG00000031684.12	ENST00000502607.1	638	3	205	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATAATGCTAGACCATC	NA	NA	NA	NA	NA	NA	NA	NA	79236203	79245966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_79236304_79242214_79242298_79245716
ENSMUSG00000031691.15_85763544_85777160_1	chr8	+	1745	14	ISM	ENSMUSG00000031691.15	ENST00000592287.5	2914	25	34	5109	0	-5109	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACCCTAGACATACTCT	NA	NA	NA	NA	NA	NA	NA	NA	85763543	85777160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987
ENSMUSG00000031691.15_85765006_85778253_1	chr8	+	1769	14	ISM	ENSMUSG00000031691.15	ENSMUST00000211601.2	2941	25	1209	4046	1209	-4016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGGCTCAGGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	85765005	85778253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166
ENSMUSG00000031691.15_85767091_85778435_1	chr8	+	1764	14	ISM	ENSMUSG00000031691.15	ENSMUST00000211601.2	2941	25	3294	3864	3294	-3834	internal_fragment	TRUE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCACCCTGGGCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	85767090	85778435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327
ENSMUSG00000031691.15_85767287_85778593_1	chr8	+	1720	14	ISM	ENSMUSG00000031691.15	ENSMUST00000211601.2	2941	25	3490	3706	3490	-3676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCTGAGGGCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	85767286	85778593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517
ENSMUSG00000031691.15_85767287_85783150_1	chr8	+	3466	22	ISM	ENSMUSG00000031691.15	ENSMUST00000166592.2	4884	25	3490	1062	3490	851	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTAACAGCATGTGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	85767286	85783150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ENSMUSG00000031691.15_85771040_85780175_1	chr8	+	1786	14	ISM	ENSMUSG00000031691.15	ENSMUST00000211601.2	2941	25	7243	2124	7243	-2094	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTACCCTGTTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	85771039	85780175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087
ENSMUSG00000031691.15_85771884_85783775_1	chr8	+	3482	17	ISM	ENSMUSG00000031691.15	ENSMUST00000166592.2	4884	25	8087	437	8087	-434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGGGTCTTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	85771883	85783775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ENSMUSG00000031691.15_85773971_85783953_1	chr8	+	3485	15	ISM	ENSMUSG00000031691.15	ENSMUST00000166592.2	4884	25	10174	259	10174	-256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTAATTTATTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	85773970	85783953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ENSMUSG00000031691.15_85774012_85782299_1	chr8	+	1790	15	ISM	ENSMUSG00000031691.15	ENST00000592287.5	2914	25	10502	-30	10215	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCATCTGTCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	85774011	85782299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ENSMUSG00000031696.10_85987021_86010781_1	chr8	-	2569	12	ISM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	15650	0	15650	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATTATCTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	86010781	85987020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621
ENSMUSG00000031696.10_85987282_86013050_1	chr8	-	2443	13	ISM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	13381	261	13381	-261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACTAGAATATATTAATG	NA	NA	NA	NA	NA	NA	NA	NA	86013050	85987281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969
ENSMUSG00000031696.10_85987282_86013152_1	chr8	-	2545	13	ISM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	13279	261	13279	-261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACTAGAATATATTAATG	NA	NA	NA	NA	NA	NA	NA	NA	86013152	85987281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969
ENSMUSG00000031696.10_85987564_86021537_1	chr8	-	2534	16	ISM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	4894	543	4894	-543	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCATGACTGATCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	86021537	85987563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487
ENSMUSG00000031696.10_85987740_86026133_1	chr8	-	2457	17	FSM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	298	719	298	-719	multi-exon	FALSE	canonical	NA	NA	NA	NA	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTTTCTACACATCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	86026133	85987739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ENSMUSG00000031696.10_85987789_86026185_1	chr8	-	2460	17	FSM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	246	768	246	-768	multi-exon	FALSE	canonical	NA	NA	NA	NA	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAATCTATGAAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	86026185	85987788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ENSMUSG00000031696.10_85987842_86026240_1	chr8	-	2462	17	FSM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	191	821	191	-821	multi-exon	FALSE	canonical	NA	NA	NA	NA	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACAACACATTGGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	86026240	85987841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ENSMUSG00000031696.10_85988620_86026431_1	chr8	-	2560	16	ISM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	0	1599	0	-1599	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAATTGCTCTCTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	86026431	85988619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ENSMUSG00000031697.13_86026420_86034908_1	chr8	+	1365	6	FSM	ENSMUSG00000031697.13	ENSMUST00000170141.3	1466	6	102	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTTGTGATTGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	86026419	86034908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_86026622_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ENSMUSG00000031697.13_86029535_86032897_1	chr8	+	309	4	ISM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	3115	1803	3115	-1803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTCCAACACTGAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86029534	86032897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86029589_86029990_86030081_86031837_86031951_86032845
ENSMUSG00000031697.13_86030053_86034266_1	chr8	+	295	4	ISM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	3633	434	3633	-434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGGATTATGAAGAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	86030052	86034266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86030081_86031837_86031951_86032845_86032948_86034214
ENSMUSG00000031700.12_86219236_86252684_1	chr8	+	2103	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	31	1505	31	-1505	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGAGATCCATGAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	86219235	86252684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ENSMUSG00000031700.12_86219236_86252751_1	chr8	+	2170	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	31	1438	31	-1438	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTAGTGAGAACTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	86219235	86252751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ENSMUSG00000031700.12_86229935_86253030_1	chr8	+	2060	10	ISM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	10730	1159	10730	-1159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTGTAACTAACTGAT	NA	NA	NA	NA	NA	NA	NA	NA	86229934	86253030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ENSMUSG00000031700.12_86229971_86253114_1	chr8	+	2108	10	ISM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	10766	1075	10766	-1075	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCAGTTTCCTGCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	86229970	86253114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ENSMUSG00000031700.12_86235895_86253316_1	chr8	+	2101	8	ISM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	16690	873	16690	-873	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGGGAAAGCTGTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	86235894	86253316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ENSMUSG00000031700.12_86242802_86253610_1	chr8	+	2092	6	ISM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	23597	579	23597	-579	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATATAATCCAGATATGC	NA	NA	NA	NA	NA	NA	NA	NA	86242801	86253610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ENSMUSG00000031700.12_86246174_86253905_1	chr8	+	2088	4	ISM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	26969	284	26969	-284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTGGTTATGATAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	86246173	86253905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86246252_86247967_86248124_86249884_86249998_86252164
ENSMUSG00000031700.12_86248046_86254058_1	chr8	+	2085	3	ISM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	28841	131	28841	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTGAGCAGGCGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	86248045	86254058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86248124_86249884_86249998_86252164
ENSMUSG00000031700.12_86249882_86254189_1	chr8	+	2141	2	ISM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	30677	0	30677	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCAGCTTGGTCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	86249881	86254189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86249998_86252164
ENSMUSG00000031701.7_86264713_86266808_1	chr8	-	1454	2	ISM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	15165	451	15165	-451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGATGGGATGATGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	86266808	86264712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_86266037_86266678
ENSMUSG00000031701.7_86264854_86267081_1	chr8	-	1456	3	ISM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	14892	592	14892	-592	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGACTGTTTGGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	86267081	86264853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_86266037_86266678_86266807_86266936
ENSMUSG00000031701.7_86264854_86273218_1	chr8	-	1533	4	ISM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	8755	592	8755	-592	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGACTGTTTGGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	86273218	86264853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141
ENSMUSG00000031701.7_86265193_86275326_1	chr8	-	1448	5	ISM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	6647	931	6647	-931	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATCTTTAAACAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	86275326	86265192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192
ENSMUSG00000031701.7_86265193_86275591_1	chr8	-	1529	6	ISM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	6382	931	6382	-931	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATCTTTAAACAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	86275591	86265192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510
ENSMUSG00000031701.7_86265628_86281837_1	chr8	-	1417	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	136	1366	136	-1366	multi-exon	FALSE	canonical	NA	NA	NA	NA	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTCCCTTTCACATGTG	NA	NA	NA	NA	NA	NA	NA	NA	86281837	86265627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
ENSMUSG00000031701.7_86265678_86281973_1	chr8	-	1503	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	0	1416	0	-1416	multi-exon	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACATCTTCATTTCGAC	NA	NA	NA	NA	NA	NA	NA	NA	86281973	86265677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
ENSMUSG00000031701.7_86265729_86281973_1	chr8	-	1452	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	0	1467	0	-1467	multi-exon	FALSE	canonical	NA	NA	NA	NA	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAATTGGTATCGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	86281973	86265728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
ENSMUSG00000031703.9_86445505_86449313_1	chr8	-	106	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	118237	1298	118237	-1298	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGACTTTGCTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	86449313	86445504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_86445557_86449259
ENSMUSG00000031703.9_86452173_86452855_1	chr8	-	114	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	114695	7966	114695	-7966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCCATATCCTCACAATG	NA	NA	NA	NA	NA	NA	NA	NA	86452855	86452172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_86452226_86452794
ENSMUSG00000031703.9_86452855_86459057_1	chr8	-	121	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	108493	8648	108493	-8648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGTGCCAATTTCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	86459057	86452854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_86452920_86459001
ENSMUSG00000031703.9_86466962_86490935_1	chr8	-	118	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	76615	22755	76615	-22755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCGAAGAAGTGCATCG	NA	NA	NA	NA	NA	NA	NA	NA	86490935	86466961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_86467008_86490863
ENSMUSG00000031703.9_86493621_86502819_1	chr8	-	112	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	64731	49414	64731	-49414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCATATATTTAATGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	86502819	86493620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_86493682_86502768
ENSMUSG00000031703.9_86502836_86537215_1	chr8	-	119	3	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	30335	58629	30335	-58629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCATAGTGTCTTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86537215	86502835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_86502851_86507144_86507207_86537173
ENSMUSG00000031708.18_84298329_84321050_1	chr8	-	1096	13	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84321050	84298328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301152_84320968
ENSMUSG00000031708.18_84298329_84321050_2	chr8	-	1096	13	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84321050	84298328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299854_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ENSMUSG00000031708.18_84298329_84321070_1	chr8	-	1117	13	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84321070	84298328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299661_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ENSMUSG00000031708.18_84298329_84321070_2	chr8	-	1114	12	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84321070	84298328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_84298565_84298822_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ENSMUSG00000031708.18_84298329_84321070_3	chr8	-	1110	12	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84321070	84298328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299277_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ENSMUSG00000031708.18_84298329_84321070_4	chr8	-	1107	12	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84321070	84298328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_84298565_84298829_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ENSMUSG00000031708.18_84299311_84301157_1	chr8	-	501	6	ISM	ENSMUSG00000031708.18	ENSMUST00000165740.9	1120	12	19956	982	314	-982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGGGTCCAGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	84301157	84299310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300499_84300552_84301106
ENSMUSG00000031711.8_83490250_83493402_1	chr8	-	1141	4	ISM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	7387	0	7387	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGGTACTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	83493402	83490249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297
ENSMUSG00000031711.8_83490418_83495975_1	chr8	-	1127	6	ISM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	4814	168	4814	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGCCATGTTCACCGTT	NA	NA	NA	NA	NA	NA	NA	NA	83495975	83490417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948
ENSMUSG00000031711.8_83490591_83497498_1	chr8	-	1071	7	NNC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	3291	-341	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAATATATTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	83497498	83490590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_83491121_83491488_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429
ENSMUSG00000031711.8_83490647_83499542_1	chr8	-	1076	9	ISM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	1247	397	1247	-397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGGTGGGTTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	83499542	83490646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508
ENSMUSG00000031711.8_83490682_83499592_1	chr8	-	1091	9	ISM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	1197	432	1197	-432	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCATCATGGGTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	83499592	83490681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508
ENSMUSG00000031711.8_83490683_83499580_1	chr8	-	1073	8	NNC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	1209	-433	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGCATCATGGGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	83499580	83490682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497516_83499508
ENSMUSG00000031711.8_83490781_83500743_1	chr8	-	1104	9	NNC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	46	-531	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAGTCCAGTCACACTG	NA	NA	NA	NA	NA	NA	NA	NA	83500743	83490780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83499482_83499641_83500685
ENSMUSG00000031711.8_83490793_83500750_1	chr8	-	1093	10	FSM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	39	543	39	-543	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGCCTTGTCCAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	83500750	83490792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
ENSMUSG00000031711.8_83490799_83500743_1	chr8	-	1070	9	NNC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	46	-549	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCCCTTGCCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	83500743	83490798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497511_83499508_83499641_83500685
ENSMUSG00000031712.11_83058368_83061158_1	chr8	-	347	2	ISM	ENSMUSG00000031712.11	ENST00000514653.5	761	5	9944	-17	9944	17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGACTTATTTTTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	83061158	83058367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_83058654_83061097
ENSMUSG00000031712.11_83058543_83069937_1	chr8	-	364	4	ISM	ENSMUSG00000031712.11	ENST00000514653.5	761	5	1165	158	1165	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGCGAGCCTCTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	83069937	83058542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_83058654_83061097_83061236_83064194_83064240_83069867
ENSMUSG00000031712.11_83061164_83070041_1	chr8	-	291	3	ISM	ENSMUSG00000031712.11	ENST00000514653.5	761	5	1061	2779	1061	-2779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACTCTTAATGAAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	83070041	83061163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_83061236_83064194_83064240_83069867
ENSMUSG00000031715.15_81427195_81431407_1	chr8	-	845	3	ISM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	34719	2059	34719	-2059	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTAATAATTTTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	81431407	81427194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_81427758_81428756_81428865_81431233
ENSMUSG00000031715.15_81444191_81454322_1	chr8	-	854	7	ISM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	11804	19055	11804	-19055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGGTTGGATGGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	81454322	81444190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244
ENSMUSG00000031715.15_81454305_81465849_1	chr8	-	862	6	ISM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	277	29169	277	-29169	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAGAAATGGGTACCAAC	NA	NA	NA	NA	NA	NA	NA	NA	81465849	81454304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ENSMUSG00000031723.9_110292524_110299463_1	chr8	+	670	4	FSM	ENSMUSG00000031723.9	ENSMUST00000034159.8	1890	4	0	1220	0	-692	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACCTCCTCTATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	110292523	110299463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_110292696_110295521_110295730_110298002_110298155_110299325
ENSMUSG00000031723.9_110295520_110299647_1	chr8	+	684	3	ISM	ENSMUSG00000031723.9	ENSMUST00000178445.2	830	4	0	508	0	-508	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAATCAGGATGCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	110295519	110299647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_110295730_110298002_110298155_110299325
ENSMUSG00000031723.9_110298025_110299797_1	chr8	+	602	2	ISM	ENSMUSG00000031723.9	ENSMUST00000178445.2	830	4	2505	358	2505	-358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGCCATGTTTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	110298024	110299797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_110298155_110299325
ENSMUSG00000031723.9_110298086_110299855_1	chr8	+	599	2	ISM	ENSMUSG00000031723.9	ENSMUST00000178445.2	830	4	2566	300	2566	-300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCTCCTACCCCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	110298085	110299855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_110298155_110299325
ENSMUSG00000031728.11_110432720_110451564_1	chr8	+	1840	6	NNC	ENSMUSG00000031728.11	novel	2081	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	110432719	110451564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_110433052_110436042_110436164_110447833_110447980_110448385_110448491_110449518_110449686_110450595
ENSMUSG00000031728.11_110432720_110451564_2	chr8	+	1838	6	NNC	ENSMUSG00000031728.11	novel	2081	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	110432719	110451564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_110433052_110436047_110436160_110447826_110447980_110448385_110448491_110449518_110449686_110450595
ENSMUSG00000031728.11_110432835_110451564_1	chr8	+	1721	6	NNC	ENSMUSG00000031728.11	novel	2081	8	NA	NA	78	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	110432834	110451564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_110433052_110436042_110436160_110447826_110447980_110448392_110448491_110449518_110449686_110450595
ENSMUSG00000031728.11_110432835_110451564_2	chr8	+	1728	6	NNC	ENSMUSG00000031728.11	novel	2081	8	NA	NA	78	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	110432834	110451564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_110433052_110436042_110436160_110447826_110447980_110448385_110448491_110449518_110449686_110450595
ENSMUSG00000031728.11_110433004_110450643_1	chr8	+	764	7	NNC	ENSMUSG00000031728.11	novel	1807	7	NA	NA	247	-795	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGAAGGTCCCTCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	110433003	110450643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_110433052_110436042_110436160_110444393_110444520_110447826_110447980_110448385_110448491_110449518_110449686_110450595
ENSMUSG00000031728.11_110436044_110450673_1	chr8	+	741	6	ISM	ENSMUSG00000031728.11	ENST00000565601.5	1807	7	3292	765	3	-765	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACATTGCCTGTAGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	110436043	110450673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_110436160_110444393_110444520_110447826_110447976_110448385_110448491_110449518_110449686_110450595
ENSMUSG00000031728.11_110436062_110451564_1	chr8	+	1440	5	NNC	ENSMUSG00000031728.11	novel	2081	8	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	110436061	110451564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_110436160_110444393_110444520_110447826_110447976_110448392_110448491_110450595
ENSMUSG00000031728.11_110436076_110451564_1	chr8	+	1433	5	FSM	ENSMUSG00000031728.11	ENST00000611294.4	1466	5	35	-2	35	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	110436075	110451564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_110436160_110444393_110444520_110447826_110447976_110448385_110448491_110450595
ENSMUSG00000031728.11_110444419_110450838_1	chr8	+	765	5	ISM	ENSMUSG00000031728.11	ENST00000565601.5	1807	7	11667	600	8378	-600	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACGCACAGCCAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	110444418	110450838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_110444520_110447826_110447976_110448385_110448491_110449518_110449686_110450595
ENSMUSG00000031728.11_110444473_110450890_1	chr8	+	763	5	ISM	ENSMUSG00000031728.11	ENST00000565601.5	1807	7	11721	548	8432	-548	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTAAGACGCATGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	110444472	110450890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_110444520_110447826_110447976_110448385_110448491_110449518_110449686_110450595
ENSMUSG00000031729.7_110397957_110403482_1	chr8	-	1459	3	ISM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	16410	0	2660	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGTTGGTCAAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	110403482	110397956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110399274_110402007_110402057_110403389
ENSMUSG00000031729.7_110398084_110404286_1	chr8	-	1501	4	ISM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	15606	127	1856	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGATTTTTGCTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	110404286	110398083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117
ENSMUSG00000031729.7_110398190_110405568_1	chr8	-	1509	5	ISM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	14324	233	574	-233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTTTCCTGGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	110405568	110398189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486
ENSMUSG00000031729.7_110398405_110409248_1	chr8	-	1514	8	ISM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	10644	448	1164	414	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTCCCCATAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	110409248	110398404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229
ENSMUSG00000031729.7_110398405_110409320_1	chr8	-	1586	8	ISM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	10572	448	1092	414	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTCCCCATAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	110409320	110398404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229
ENSMUSG00000031729.7_110398544_110409388_1	chr8	-	1515	8	ISM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	10504	587	1024	275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGTTCCACCTGGATC	NA	NA	NA	NA	NA	NA	NA	NA	110409388	110398543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229
ENSMUSG00000031729.7_110398717_110419879_1	chr8	-	1531	10	FSM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	13	760	13	102	multi-exon	FALSE	canonical	NA	NA	NA	NA	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGGTTTCAACCTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	110419879	110398716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ENSMUSG00000031729.7_110398926_110410410_1	chr8	-	1252	9	NNC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	931	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTCTTCAGTGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	110410410	110398925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405492_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307
ENSMUSG00000031729.7_110398926_110410410_2	chr8	-	1258	9	ISM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	9482	969	2	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTCTTCAGTGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	110410410	110398925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307
ENSMUSG00000031731.17_110505186_110587222_1	chr8	+	3276	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-352	768	0	-259	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCATCTCTGTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	110505185	110587222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ENSMUSG00000031731.17_110505186_110587222_2	chr8	+	3270	23	NNC	ENSMUSG00000031731.17	novel	6899	24	NA	NA	0	-259	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCATCTCTGTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	110505185	110587222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586731
ENSMUSG00000031731.17_110505405_110587402_1	chr8	+	3237	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-133	588	-133	-79	multi-exon	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACACACAGACACACATGTA	NA	NA	NA	NA	NA	NA	NA	NA	110505404	110587402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ENSMUSG00000031731.17_110505405_110587402_3	chr8	+	3230	23	NNC	ENSMUSG00000031731.17	novel	3692	23	NA	NA	-133	-79	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACACACAGACACACATGTA	NA	NA	NA	NA	NA	NA	NA	NA	110505404	110587402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578338_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ENSMUSG00000031731.17_110505405_110587482_1	chr8	+	3317	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-133	508	-133	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGCAGTTCAGAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	110505404	110587482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ENSMUSG00000031731.17_110505529_110587482_1	chr8	+	3193	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-9	508	-9	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGCAGTTCAGAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	110505528	110587482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ENSMUSG00000031731.17_110505529_110587482_2	chr8	+	3186	23	NNC	ENSMUSG00000031731.17	novel	3692	23	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGCAGTTCAGAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	110505528	110587482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578338_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ENSMUSG00000031737.12_93084854_93088143_1	chr8	+	2032	3	FSM	ENSMUSG00000031737.12	ENSMUST00000034184.12	2450	3	477	-59	42	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAACTGTAACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	93084853	93088143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_93085058_93086164_93086571_93086721
ENSMUSG00000031737.12_93084854_93088143_2	chr8	+	2023	3	NNC	ENSMUSG00000031737.12	novel	2071	3	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	948	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAACTGTAACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	93084853	93088143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_93085058_93086164_93086571_93086730
ENSMUSG00000031740.9_93553919_93579630_1	chr8	+	2660	13	FSM	ENSMUSG00000031740.9	ENSMUST00000034187.9	3078	13	0	418	0	-418	multi-exon	FALSE	canonical	NA	NA	NA	NA	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGAGGGCACTGGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	93553918	93579630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_93554406_93557248_93557476_93558312_93558462_93559391_93559521_93559696_93559871_93562596_93562771_93563533_93563708_93565880_93566037_93567017_93567160_93570447_93570585_93572708_93572869_93576753_93576864_93579189
ENSMUSG00000031740.9_93554116_93579740_1	chr8	+	2573	13	FSM	ENSMUSG00000031740.9	ENSMUST00000034187.9	3078	13	197	308	197	-308	multi-exon	FALSE	canonical	NA	NA	NA	NA	2505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCACCACCTTAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	93554115	93579740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_93554406_93557248_93557476_93558312_93558462_93559391_93559521_93559696_93559871_93562596_93562771_93563533_93563708_93565880_93566037_93567017_93567160_93570447_93570585_93572708_93572869_93576753_93576864_93579189
ENSMUSG00000031740.9_93554298_93580048_1	chr8	+	2699	13	FSM	ENSMUSG00000031740.9	ENSMUST00000034187.9	3078	13	379	0	379	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGCTCTGTTTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	93554297	93580048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_93554406_93557248_93557476_93558312_93558462_93559391_93559521_93559696_93559871_93562596_93562771_93563533_93563708_93565880_93566037_93567017_93567160_93570447_93570585_93572708_93572869_93576753_93576864_93579189
ENSMUSG00000031740.9_93557248_93580048_1	chr8	+	2592	12	ISM	ENSMUSG00000031740.9	ENSMUST00000034187.9	3078	13	3329	0	3329	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGCTCTGTTTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	93557247	93580048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_93557476_93558312_93558462_93559391_93559521_93559696_93559871_93562596_93562771_93563533_93563708_93565880_93566037_93567017_93567160_93570447_93570585_93572708_93572869_93576753_93576864_93579189
ENSMUSG00000031748.17_94537772_94695584_1	chr8	+	3158	8	FSM	ENSMUSG00000031748.17	ENSMUST00000125716.8	3462	8	304	0	-169	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAGAACAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	94537771	94695584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_94538082_94538278_94538322_94622858_94623001_94670825_94670987_94676031_94676161_94676929_94677060_94690011_94690166_94693495
ENSMUSG00000031749.13_111683526_111696266_1	chr8	+	1668	5	ISM	ENSMUSG00000031749.13	ENSMUST00000117534.8	2177	6	36972	189	36972	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTTGCACTACATGTG	NA	NA	NA	NA	NA	NA	NA	NA	111683525	111696266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175
ENSMUSG00000031749.13_111684129_111697277_1	chr8	+	1638	6	ISM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	37575	1835	37575	822	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGCGCACCAGGTAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	111684128	111697277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
ENSMUSG00000031750.16_111468472_111482241_1	chr8	-	1498	6	ISM	ENSMUSG00000031750.16	ENSMUST00000076846.11	1709	7	50294	0	50263	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGCATCTCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	111482241	111468471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111475373_111476056_111476191_111481862
ENSMUSG00000031751.15_94699819_94700725_1	chr8	-	163	2	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	38745	1603	38745	-1603	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGAGGCAACGGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	94700725	94699818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_94699943_94700686
ENSMUSG00000031751.15_94699881_94700791_1	chr8	-	167	2	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	38679	1665	38679	-1665	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATCCTCTGACCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	94700791	94699880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_94699943_94700686
ENSMUSG00000031751.15_94702777_94709993_1	chr8	-	178	3	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	29477	4561	29477	-4561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCTCAGGTCCCGTACC	NA	NA	NA	NA	NA	NA	NA	NA	94709993	94702776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_94702797_94706945_94707050_94709939
ENSMUSG00000031751.15_94710040_94711535_1	chr8	-	165	2	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	27935	11824	27935	-11824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCATCAAGGAGAGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	94711535	94710039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_94710131_94711461
ENSMUSG00000031751.15_94712076_94714133_1	chr8	-	157	2	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	25337	13860	25337	-13860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTAGCTTGGTCATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	94714133	94712075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_94712101_94714001
ENSMUSG00000031751.15_94725843_94727040_1	chr8	-	144	2	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	12430	27627	12430	-27627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGAGTCCTGTCCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	94727040	94725842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_94725879_94726932
ENSMUSG00000031751.15_94731788_94738943_1	chr8	-	163	2	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	527	33572	527	-33572	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTCTTCGAGTGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	94738943	94731787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_94731854_94738846
ENSMUSG00000031753.17_111573656_111593359_1	chr8	+	1496	11	ISM	ENSMUSG00000031753.17	ENST00000674443.1	2402	18	-2	15220	-2	-15168	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGTTGATGCCCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	111573655	111593359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192
ENSMUSG00000031753.17_111573788_111594875_1	chr8	+	1406	12	ISM	ENSMUSG00000031753.17	ENST00000393612.8	2387	18	115	13704	115	-13652	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTTACAGGACATCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	111573787	111594875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833
ENSMUSG00000031753.17_111576503_111595053_1	chr8	+	1527	11	ISM	ENSMUSG00000031753.17	ENST00000393612.8	2387	18	2830	13526	2830	-13474	internal_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAAATAGGTTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	111576502	111595053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833
ENSMUSG00000031753.17_111577967_111605754_1	chr8	+	1511	11	ISM	ENSMUSG00000031753.17	ENST00000393612.8	2387	18	4294	2825	4294	-2773	internal_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAACCTGAGTTCCGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	111577966	111605754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111605637
ENSMUSG00000031753.17_111578916_111606357_1	chr8	+	1490	11	ISM	ENSMUSG00000031753.17	ENST00000393612.8	2387	18	5243	2222	5243	-2170	internal_fragment	TRUE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCCTGGCCACAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	111578915	111606357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111605637_111605755_111606264
ENSMUSG00000031753.17_111579030_111607261_1	chr8	+	1411	12	ISM	ENSMUSG00000031753.17	ENST00000393612.8	2387	18	5357	1318	5357	-1266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACAGCAATTCATCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	111579029	111607261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111605637_111605755_111606264_111606358_111607226
ENSMUSG00000031753.17_111580300_111607608_1	chr8	+	1501	12	ISM	ENSMUSG00000031753.17	ENST00000393612.8	2387	18	6627	971	6627	-919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTTCCAAGGAACATAA	NA	NA	NA	NA	NA	NA	NA	NA	111580299	111607608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111605637_111605755_111606264_111606358_111607226_111607311_111607506
ENSMUSG00000031753.17_111580448_111608060_1	chr8	+	1411	13	ISM	ENSMUSG00000031753.17	ENST00000393612.8	2387	18	6775	519	6775	-467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAACCTGGACCATCCGA	NA	NA	NA	NA	NA	NA	NA	NA	111580447	111608060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002
ENSMUSG00000031753.17_111584566_111600840_1	chr8	+	975	8	ISM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	10900	8019	10893	-7687	internal_fragment	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACGGGAAATTGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	111584565	111600840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777
ENSMUSG00000031753.17_111584623_111608436_1	chr8	+	1454	13	ISM	ENSMUSG00000031753.17	ENST00000393612.8	2387	18	10950	143	10950	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTGCTGGCTCTGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	111584622	111608436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ENSMUSG00000031753.17_111585167_111605754_1	chr8	+	985	8	ISM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	11501	3105	11494	-2773	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAACCTGAGTTCCGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	111585166	111605754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637
ENSMUSG00000031753.17_111585291_111606312_1	chr8	+	909	9	ISM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	11625	2547	11618	-2215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGATCAACACTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	111585290	111606312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264
ENSMUSG00000031753.17_111589965_111607556_1	chr8	+	911	9	ISM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	16299	1303	16292	-971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTGCTGTTGAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	111589964	111607556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506
ENSMUSG00000031753.17_111592665_111608072_1	chr8	+	925	9	ISM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	18999	787	18992	-455	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCGAGACAAGTTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	111592664	111608072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002
ENSMUSG00000031753.17_111593239_111608417_1	chr8	+	930	9	ISM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	19573	442	19566	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCCTGCTGAAGTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	111593238	111608417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ENSMUSG00000031753.17_111593309_111608497_1	chr8	+	940	9	ISM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	19643	362	19636	-30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCATGTGGCCCGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	111593308	111608497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ENSMUSG00000031753.17_111600791_111608692_1	chr8	+	905	7	ISM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	27125	167	27118	113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAACAGAGAGGTGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	111600790	111608692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ENSMUSG00000031753.17_111605657_111608853_1	chr8	+	997	6	ISM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	31991	6	31984	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACATGCCATTGTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	111605656	111608853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ENSMUSG00000031753.17_111605718_111608859_1	chr8	+	942	6	ISM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	32052	0	32045	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTGTGTTGGGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	111605717	111608859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ENSMUSG00000031754.11_94746282_94763355_1	chr8	-	699	7	FSM	ENSMUSG00000031754.11	ENSMUST00000212981.2	1184	7	279	206	279	-206	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTATGAGCACAGCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	94763355	94746281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763253
ENSMUSG00000031754.11_94755511_94763503_1	chr8	-	406	4	ISM	ENSMUSG00000031754.11	ENSMUST00000034204.11	5010	7	156	13387	131	-9435	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACTGCATTGGGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	94763503	94755510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_94755553_94757771_94757836_94758929_94759131_94763404
ENSMUSG00000031755.7_94794582_94806195_1	chr8	-	1046	6	ISM	ENSMUSG00000031755.7	ENSMUST00000034206.6	3064	17	19361	0	19361	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGTTGTTTATAAATT	NA	NA	NA	NA	NA	NA	NA	NA	94806195	94794581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_94795011_94796589_94796739_94800919_94801033_94801750_94801889_94803579_94803712_94806110
ENSMUSG00000031755.7_94794772_94807493_1	chr8	-	999	7	ISM	ENSMUSG00000031755.7	ENSMUST00000034206.6	3064	17	18063	190	18063	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGCTGAAAGCCTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	94807493	94794771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_94795011_94796589_94796739_94800919_94801033_94801750_94801889_94803579_94803712_94806110_94806241_94807395
ENSMUSG00000031756.6_117649066_117667882_1	chr8	+	1365	11	ISM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	587	360	0	228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGGAGGCTGCAGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	117649065	117667882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ENSMUSG00000031756.6_117649066_117667960_1	chr8	+	1443	11	ISM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	587	282	0	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTCCCGCTGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	117649065	117667960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ENSMUSG00000031756.6_117649066_117668015_1	chr8	+	1498	11	ISM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	587	227	0	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACCCTTGATCACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	117649065	117668015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ENSMUSG00000031756.6_117652848_117668179_1	chr8	+	1520	10	ISM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	4369	63	3782	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATCCATGGCACACTGA	NA	NA	NA	NA	NA	NA	NA	NA	117652847	117668179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ENSMUSG00000031756.6_117661432_117667654_1	chr8	+	483	5	ISM	ENSMUSG00000031756.6	ENSMUST00000212263.2	1616	10	12366	525	3610	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACATATGGCTTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	117661431	117667654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ENSMUSG00000031758.11_117301592_117309835_1	chr8	-	669	3	ISM	ENSMUSG00000031758.11	ENST00000563890.5	2073	7	149801	205	149801	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCAGGCCCTGTCGACCT	NA	NA	NA	NA	NA	NA	NA	NA	117309835	117301591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117302027_117305906_117306051_117309745
ENSMUSG00000031758.11_117301655_117309899_1	chr8	-	670	3	ISM	ENSMUSG00000031758.11	ENST00000563890.5	2073	7	149737	268	149737	-268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTGTGCACCCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	117309899	117301654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117302027_117305906_117306051_117309745
ENSMUSG00000031758.11_117301756_117316037_1	chr8	-	675	4	ISM	ENSMUSG00000031758.11	ENST00000563890.5	2073	7	143599	369	143599	-369	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTGTCTTCACACCTAC	NA	NA	NA	NA	NA	NA	NA	NA	117316037	117301755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988
ENSMUSG00000031758.11_117301882_117321743_1	chr8	-	716	5	ISM	ENSMUSG00000031758.11	ENST00000563890.5	2073	7	137893	495	137893	-495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGAAGTCTGAAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	117321743	117301881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700
ENSMUSG00000031758.11_117301999_117321850_1	chr8	-	706	5	ISM	ENSMUSG00000031758.11	ENST00000563890.5	2073	7	137786	612	137786	-612	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTTCCTGAAGTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	117321850	117301998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700
ENSMUSG00000031758.11_117306008_117350596_1	chr8	-	719	5	ISM	ENSMUSG00000031758.11	ENSMUST00000109102.4	2411	7	109134	4869	109040	-4621	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATGCAGCCGGGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	117350596	117306007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522
ENSMUSG00000031758.11_117309816_117350655_1	chr8	-	665	4	ISM	ENSMUSG00000031758.11	ENSMUST00000109102.4	2411	7	109075	8677	108981	-8429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTACCATCCGACTCACGC	NA	NA	NA	NA	NA	NA	NA	NA	117350655	117309815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117309957_117315988_117316162_117321700_117321919_117350522
ENSMUSG00000031758.11_117309863_117350713_1	chr8	-	676	4	ISM	ENSMUSG00000031758.11	ENSMUST00000109102.4	2411	7	109017	8724	108923	-8476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACATCGTATGGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	117350713	117309862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117309957_117315988_117316162_117321700_117321919_117350522
ENSMUSG00000031758.11_117316040_117350898_1	chr8	-	716	3	ISM	ENSMUSG00000031758.11	ENSMUST00000109102.4	2411	7	108832	14901	108738	-14653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCCAGCGACCGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	117350898	117316039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117316162_117321700_117321919_117350522
ENSMUSG00000031758.11_117316124_117350927_1	chr8	-	661	3	ISM	ENSMUSG00000031758.11	ENSMUST00000109102.4	2411	7	108803	14985	108709	-14737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGATGACAGCAAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	117350927	117316123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117316162_117321700_117321919_117350522
ENSMUSG00000031758.11_117321802_117351060_1	chr8	-	659	2	ISM	ENSMUSG00000031758.11	ENST00000563890.5	2073	7	108576	20415	108576	-20415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTGTCGGTTTCGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	117351060	117321801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117321919_117350518
ENSMUSG00000031758.11_117321869_117459599_1	chr8	-	696	3	ISM	ENSMUSG00000031758.11	ENSMUST00000109102.4	2411	7	131	20730	37	-20482	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGGAGACGGAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	117459599	117321868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117321919_117350522_117351106_117459536
ENSMUSG00000031762.8_94899488_94900056_1	chr8	+	109	2	FSM	ENSMUSG00000031762.8	ENST00000569500.5	120	2	12	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGCGGAGGGGTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	94899487	94900056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_94899504_94899963
ENSMUSG00000031762.8_94899488_94900196_1	chr8	+	315	3	FSM	ENSMUSG00000031762.8	ENSMUST00000034214.8	511	3	196	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCTGTGCATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	94899487	94900196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_94899504_94899754_94899821_94899963
ENSMUSG00000031766.5_95055974_95060198_1	chr8	+	525	5	ISM	ENSMUSG00000031766.5	ENSMUST00000212134.2	4310	24	141	26363	134	-26363	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGGAGGCTCCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	95055973	95060198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95056142_95057004_95057152_95058278_95058355_95059854_95059951_95060160
ENSMUSG00000031766.5_95056035_95060266_1	chr8	+	532	5	ISM	ENSMUSG00000031766.5	ENSMUST00000212134.2	4310	24	202	26295	195	-26295	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTTTGCAGAAACCGTAA	NA	NA	NA	NA	NA	NA	NA	NA	95056034	95060266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95056142_95057004_95057152_95058278_95058355_95059854_95059951_95060160
ENSMUSG00000031766.5_95057108_95061641_1	chr8	+	508	6	ISM	ENSMUSG00000031766.5	ENSMUST00000212134.2	4310	24	1275	24920	1268	-24920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTACCTGGTGGGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	95057107	95061641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95057152_95058278_95058355_95059854_95059951_95060160_95060301_95060648_95060760_95061600
ENSMUSG00000031766.5_95060219_95066383_1	chr8	+	513	5	ISM	ENSMUSG00000031766.5	ENSMUST00000212134.2	4310	24	4386	20178	4379	-20178	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATCGGTGAGTAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	95060218	95066383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95060301_95060648_95060760_95061600_95061713_95061908_95062040_95066306
ENSMUSG00000031766.5_95061641_95067460_1	chr8	+	506	5	ISM	ENSMUSG00000031766.5	ENSMUST00000212134.2	4310	24	5808	19101	5801	-19101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCCTTGGCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	95061640	95067460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95061713_95061908_95062040_95066306_95066392_95067120_95067276_95067397
ENSMUSG00000031766.5_95061951_95067911_1	chr8	+	506	5	ISM	ENSMUSG00000031766.5	ENSMUST00000212134.2	4310	24	6118	18650	6111	-18650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCGTGGCTACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	95061950	95067911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95062040_95066306_95066392_95067120_95067276_95067397_95067506_95067842
ENSMUSG00000031766.5_95066349_95069723_1	chr8	+	500	5	ISM	ENSMUSG00000031766.5	ENSMUST00000212134.2	4310	24	10516	16838	10509	-16838	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTCCATGCCTCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	95066348	95069723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95066392_95067120_95067276_95067397_95067506_95067842_95067967_95069653
ENSMUSG00000031766.5_95067120_95070669_1	chr8	+	518	5	ISM	ENSMUSG00000031766.5	ENSMUST00000212134.2	4310	24	11287	15892	11280	-15892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGGGCGGCGCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	95067119	95070669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95067276_95067397_95067506_95067842_95067967_95069653_95069756_95070641
ENSMUSG00000031766.5_95067167_95070724_1	chr8	+	526	5	ISM	ENSMUSG00000031766.5	ENSMUST00000212134.2	4310	24	11334	15837	11327	-15837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTGGGCTGCTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	95067166	95070724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95067276_95067397_95067506_95067842_95067967_95069653_95069756_95070641
ENSMUSG00000031766.5_95067236_95070769_1	chr8	+	502	5	ISM	ENSMUSG00000031766.5	ENSMUST00000212134.2	4310	24	11403	15792	11396	-15792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTCTATGTGATCTACAA	NA	NA	NA	NA	NA	NA	NA	NA	95067235	95070769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95067276_95067397_95067506_95067842_95067967_95069653_95069756_95070641
ENSMUSG00000031766.5_95067440_95071479_1	chr8	+	506	5	ISM	ENSMUSG00000031766.5	ENSMUST00000212134.2	4310	24	11607	15082	11600	-15082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGGCCTCAACGAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	95067439	95071479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95067506_95067842_95067967_95069653_95069756_95070641_95070798_95071421
ENSMUSG00000031766.5_95067871_95072459_1	chr8	+	511	5	ISM	ENSMUSG00000031766.5	ENSMUST00000212134.2	4310	24	12038	14102	12031	-14102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGCACATTTACCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	95067870	95072459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95067967_95069653_95069756_95070641_95070798_95071421_95071522_95072402
ENSMUSG00000031766.5_95069691_95072992_1	chr8	+	516	5	ISM	ENSMUSG00000031766.5	ENSMUST00000212134.2	4310	24	13858	13569	13851	-13569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTACTCTGACGTCATCG	NA	NA	NA	NA	NA	NA	NA	NA	95069690	95072992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95069756_95070641_95070798_95071421_95071522_95072402_95072515_95072909
ENSMUSG00000031766.5_95071419_95076532_1	chr8	+	546	5	ISM	ENSMUSG00000031766.5	ENSMUST00000212134.2	4310	24	15586	10029	15579	-10029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACCTGCTGCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	95071418	95076532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95071522_95072402_95072515_95072909_95073051_95075179_95075287_95076449
ENSMUSG00000031766.5_95072443_95078441_1	chr8	+	561	6	ISM	ENSMUSG00000031766.5	ENST00000563236.6	3424	26	16603	14485	16603	-8120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCCTCTGACCCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	95072442	95078441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95072515_95072909_95073051_95075179_95075287_95076449_95076533_95077346_95077399_95078335
ENSMUSG00000031766.5_95072965_95079709_1	chr8	+	502	6	ISM	ENSMUSG00000031766.5	ENST00000563236.6	3424	26	17125	13217	17125	-6852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGGGCCAGATCAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	95072964	95079709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95073051_95075179_95075287_95076449_95076533_95077346_95077399_95078335_95078438_95079637
ENSMUSG00000031766.5_95075216_95083026_1	chr8	+	507	6	ISM	ENSMUSG00000031766.5	ENST00000563236.6	3424	26	19376	9900	19376	-3535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTGTGTGTTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	95075215	95083026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95075287_95076449_95076533_95077346_95077399_95078335_95078438_95079637_95079750_95082939
ENSMUSG00000031766.5_95076450_95083727_1	chr8	+	526	6	ISM	ENSMUSG00000031766.5	ENST00000563236.6	3424	26	20610	9199	20610	-2834	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGGAAGATCTCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	95076449	95083727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95076533_95077346_95077399_95078335_95078438_95079637_95079750_95082939_95083027_95083637
ENSMUSG00000031766.5_95078388_95092522_1	chr8	+	528	6	ISM	ENSMUSG00000031766.5	ENSMUST00000034218.5	3299	25	22559	320	22548	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGACCTCCCGTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	95078387	95092522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95078438_95079637_95079750_95082939_95083027_95083637_95083774_95085083_95085152_95092447
ENSMUSG00000031766.5_95083720_95092842_1	chr8	+	517	3	ISM	ENSMUSG00000031766.5	ENSMUST00000034218.5	3299	25	27891	0	27880	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCAAAGTATTAGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	95083719	95092842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95083774_95085083_95085152_95092447
ENSMUSG00000031770.17_95113270_95120487_1	chr8	+	844	6	ISM	ENSMUSG00000031770.17	ENST00000379792.6	1761	7	110	1496	110	-1496	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGAGATGCTGCCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	95113269	95120487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95113367_95115983_95116062_95117345_95117477_95118359_95118483_95118801_95119153_95120423
ENSMUSG00000031770.17_95113289_95116202_1	chr8	+	207	3	ISM	ENSMUSG00000031770.17	ENSMUST00000034220.8	1873	8	166	5784	129	-5781	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCCAGAAACCAGCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	95113288	95116202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95113367_95115983_95116062_95116151
ENSMUSG00000031770.17_95113298_95117405_1	chr8	+	279	4	ISM	ENSMUSG00000031770.17	ENSMUST00000034220.8	1873	8	175	4581	138	-4578	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGATGGTTTACGGCA	NA	NA	NA	NA	NA	NA	NA	NA	95113297	95117405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95113367_95115983_95116062_95116151_95116224_95117345
ENSMUSG00000031770.17_95113345_95120523_1	chr8	+	805	6	ISM	ENSMUSG00000031770.17	ENST00000379792.6	1761	7	185	1460	185	-1460	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTACAGGCCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	95113344	95120523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95113367_95115983_95116062_95117345_95117477_95118359_95118483_95118801_95119153_95120423
ENSMUSG00000031770.17_95115983_95117399_1	chr8	+	208	3	ISM	ENSMUSG00000031770.17	ENSMUST00000161576.8	1952	8	2917	4606	2823	-4584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTCAAGTGATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	95115982	95117399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95116062_95116148_95116224_95117345
ENSMUSG00000031770.17_95116001_95121286_1	chr8	+	840	6	ISM	ENSMUSG00000031770.17	ENST00000379792.6	1761	7	2841	697	2841	-697	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACCAGCCCCTCGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	95116000	95121286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95116062_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
ENSMUSG00000031770.17_95118358_95121537_1	chr8	+	901	4	ISM	ENSMUSG00000031770.17	ENST00000379792.6	1761	7	5198	446	5198	-446	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	966	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGCCGTGGTACAAACT	NA	NA	NA	NA	NA	NA	NA	NA	95118357	95121537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95118483_95118801_95119153_95120423_95120530_95121218
ENSMUSG00000031770.17_95119048_95121286_1	chr8	+	279	3	ISM	ENSMUSG00000031770.17	ENST00000379792.6	1761	7	5888	697	5888	-697	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACCAGCCCCTCGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	95119047	95121286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95119153_95120423_95120530_95121218
ENSMUSG00000031770.17_95120424_95121986_1	chr8	+	874	2	ISM	ENSMUSG00000031770.17	ENST00000379792.6	1761	7	7264	-3	7264	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAGACTCCCATTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	95120423	95121986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95120530_95121218
ENSMUSG00000031772.18_113391816_113479630_1	chr8	+	535	4	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	48786	128884	48786	-128884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGGCATTCTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	113391815	113479630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113391933_113460044_113460193_113478819_113479024_113479564
ENSMUSG00000031772.18_113460090_113484106_1	chr8	+	573	4	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	117060	124408	117060	-124408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGTCTACTAAAGAGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	113460089	113484106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113460193_113478819_113479024_113479564_113479750_113484025
ENSMUSG00000031772.18_113460163_113484146_1	chr8	+	540	4	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	117133	124368	117133	-124368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGAACCTGGAATAAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	113460162	113484146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113460193_113478819_113479024_113479564_113479750_113484025
ENSMUSG00000031772.18_113479001_113494136_1	chr8	+	515	4	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	135971	114378	135971	-114378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAAGGAATCACCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	113479000	113494136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113479024_113479564_113479750_113484025_113484288_113494091
ENSMUSG00000031772.18_113479699_113500247_1	chr8	+	512	4	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	136669	108267	136669	-108267	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAAGGATGCATGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	113479698	113500247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113479750_113484025_113484288_113494091_113494242_113500198
ENSMUSG00000031772.18_113479727_113500339_1	chr8	+	576	4	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	136697	108175	136697	-108175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGATAGACTCATGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	113479726	113500339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113479750_113484025_113484288_113494091_113494242_113500198
ENSMUSG00000031772.18_113494178_113529740_1	chr8	+	522	5	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	151148	78774	151148	-78774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTGAGAATGCGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	113494177	113529740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113494242_113500198_113500371_113508154_113508262_113512407_113512528_113529681
ENSMUSG00000031772.18_113500286_113537264_1	chr8	+	558	5	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	157256	71250	157256	-71250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATTGGGGTGGTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	113500285	113537264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113500371_113508154_113508262_113512407_113512528_113529681_113529880_113537216
ENSMUSG00000031772.18_113529726_113568472_1	chr8	+	575	4	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	186696	40042	186696	-40042	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATCACTGACTTCATAC	NA	NA	NA	NA	NA	NA	NA	NA	113529725	113568472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113529880_113537216_113537374_113542111_113542240_113568336
ENSMUSG00000031772.18_113537232_113569234_1	chr8	+	526	4	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	194202	39280	194202	-39280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGCATCATGTGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	113537231	113569234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113537374_113542111_113542240_113568336_113568508_113569149
ENSMUSG00000031772.18_113537293_113569285_1	chr8	+	516	4	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	194263	39229	194263	-39229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGACGAGCTCCCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	113537292	113569285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113537374_113542111_113542240_113568336_113568508_113569149
ENSMUSG00000031772.18_113537342_113569354_1	chr8	+	536	4	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	194312	39160	194312	-39160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTCTTTGTTGGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	113537341	113569354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113537374_113542111_113542240_113568336_113568508_113569149
ENSMUSG00000031772.18_113542164_113580681_1	chr8	+	525	4	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	199134	27833	199134	-27833	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGGCCCTGGATCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	113542163	113580681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113542240_113568336_113568508_113569149_113569369_113580622
ENSMUSG00000031772.18_113542214_113580743_1	chr8	+	537	4	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	199184	27771	199184	-27771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACACTGTGGGAGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	113542213	113580743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113542240_113568336_113568508_113569149_113569369_113580622
ENSMUSG00000031772.18_113568481_113582971_1	chr8	+	533	4	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	225451	25543	225451	-25543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAAATTATTCTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	113568480	113582971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113568508_113569149_113569369_113580622_113580863_113582924
ENSMUSG00000031772.18_113569221_113583058_1	chr8	+	522	3	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	226191	25456	226191	-25456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGCTTCCGAACCACACG	NA	NA	NA	NA	NA	NA	NA	NA	113569220	113583058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113569369_113580622_113580863_113582924
ENSMUSG00000031772.18_113569268_113583113_1	chr8	+	530	3	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	226238	25401	226238	-25401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGAATACCTCTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	113569267	113583113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113569369_113580622_113580863_113582924
ENSMUSG00000031772.18_113580694_113585752_1	chr8	+	542	4	ISM	ENSMUSG00000031772.18	ENSMUST00000118171.8	4860	24	284019	23597	237664	-22762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGACAAACCTACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	113580693	113585752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113580863_113582924_113583154_113584794_113584925_113585738
ENSMUSG00000031772.18_113580756_113585798_1	chr8	+	526	4	ISM	ENSMUSG00000031772.18	ENSMUST00000118171.8	4860	24	284081	23551	237726	-22716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTGGTACTGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	113580755	113585798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113580863_113582924_113583154_113584794_113584925_113585738
ENSMUSG00000031772.18_113580828_113602080_1	chr8	+	517	5	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	237798	6434	237798	-6434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCCATGGCTTCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	113580827	113602080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113580863_113582924_113583150_113584790_113584925_113585738_113585827_113602045
ENSMUSG00000031772.18_113583091_113602615_1	chr8	+	528	5	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	240061	5899	240061	-5899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTCACTCATGCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	113583090	113602615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113583150_113584790_113584925_113585738_113585827_113602045_113602265_113602587
ENSMUSG00000031772.18_113584846_113608382_1	chr8	+	520	5	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	241816	132	241816	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCAGAAAAGGTTATACAA	NA	NA	NA	NA	NA	NA	NA	NA	113584845	113608382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113584925_113585738_113585827_113602045_113602265_113602587_113602660_113608320
ENSMUSG00000031772.18_113584902_113608435_1	chr8	+	517	5	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	241872	79	241872	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGCTGAGGCGGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	113584901	113608435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_113584925_113585738_113585827_113602045_113602265_113602587_113602660_113608320
ENSMUSG00000031774.9_95301682_95309624_1	chr8	-	982	3	ISM	ENSMUSG00000031774.9	ENSMUST00000034226.8	2873	8	19001	916	19001	-916	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTAGGAAGGAGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	95309624	95301681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95302486_95306027_95306093_95309511
ENSMUSG00000031774.9_95301892_95314657_1	chr8	-	939	5	ISM	ENSMUSG00000031774.9	ENSMUST00000034226.8	2873	8	13968	1126	13968	-1126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAATGGGTTTCTTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	95314657	95301891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630
ENSMUSG00000031774.9_95302040_95315457_1	chr8	-	917	6	ISM	ENSMUSG00000031774.9	ENSMUST00000034226.8	2873	8	13168	1274	13168	-1274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTTGTCTCAGAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	95315457	95302039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403
ENSMUSG00000031774.9_95302112_95315500_1	chr8	-	881	6	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	13125	-1346	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGCTTGATTTCTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	95315500	95302111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_95302486_95306027_95306093_95309511_95309643_95313958_95314074_95314630_95314730_95315403
ENSMUSG00000031774.9_95302153_95315956_1	chr8	-	906	7	ISM	ENSMUSG00000031774.9	ENSMUST00000034226.8	2873	8	12669	1387	12669	-1387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAACTCAGAAATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	95315956	95302152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95315938
ENSMUSG00000031774.9_95302384_95328179_2	chr8	-	809	8	FSM	ENSMUSG00000031774.9	ENSMUST00000034226.8	2873	8	446	1618	446	-1618	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCTACTCTGGGAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	95328179	95302383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ENSMUSG00000031774.9_95302384_95328305_2	chr8	-	935	8	FSM	ENSMUSG00000031774.9	ENSMUST00000034226.8	2873	8	320	1618	320	-1618	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCTACTCTGGGAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	95328305	95302383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ENSMUSG00000031774.9_95306052_95328490_1	chr8	-	994	7	ISM	ENSMUSG00000031774.9	ENSMUST00000034226.8	2873	8	135	5286	135	-5286	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGACCCAGATGACAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	95328490	95306051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ENSMUSG00000031774.9_95313961_95328625_1	chr8	-	948	5	ISM	ENSMUSG00000031774.9	ENSMUST00000034226.8	2873	8	0	13195	0	-13195	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACAGAATATCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	95328625	95313960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ENSMUSG00000031776.18_95393228_95401053_1	chr8	+	2055	6	NNC	ENSMUSG00000031776.18	novel	2063	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGATGTGCATTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	95393227	95401053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_95393530_95394224_95394287_95396956_95397056_95397922_95398009_95398689_95398787_95399644
ENSMUSG00000031776.18_95393228_95401053_2	chr8	+	2057	6	NNC	ENSMUSG00000031776.18	novel	2063	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGATGTGCATTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	95393227	95401053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_95393530_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399650
ENSMUSG00000031776.18_95393228_95401053_3	chr8	+	2057	6	NNC	ENSMUSG00000031776.18	novel	2063	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGATGTGCATTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	95393227	95401053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_95393524_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
ENSMUSG00000031781.15_95548686_95553342_1	chr8	-	1425	4	ISM	ENSMUSG00000031781.15	ENSMUST00000034233.15	1807	9	11551	-503	5200	503	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCACAGTCCCTGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	95553342	95548685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262
ENSMUSG00000031781.15_95548801_95554984_1	chr8	-	1384	5	ISM	ENSMUSG00000031781.15	ENSMUST00000034233.15	1807	9	9909	-388	3558	388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGACCCTTGCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	95554984	95548800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904
ENSMUSG00000031781.15_95548940_95555839_1	chr8	-	1386	6	ISM	ENSMUSG00000031781.15	ENSMUST00000034233.15	1807	9	9054	-249	2703	249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCCCTCCTGCCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	95555839	95548939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781
ENSMUSG00000031781.15_95549189_95559287_1	chr8	-	1454	8	ISM	ENSMUSG00000031781.15	ENSMUST00000034233.15	1807	9	5606	0	-745	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTACTGTGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	95559287	95549188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142
ENSMUSG00000031781.15_95549353_95564938_1	chr8	-	1390	9	FSM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	48	2921	-45	-149	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGTCAAAGGGCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	95564938	95549352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
ENSMUSG00000031781.15_95549482_95553342_1	chr8	-	513	3	ISM	ENSMUSG00000031781.15	ENST00000569370.5	1167	6	5200	278	5200	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCTGGTGTTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	95553342	95549481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95549836_95550280_95550360_95553262
ENSMUSG00000031781.15_95549482_95564986_1	chr8	-	1309	9	FSM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	0	3050	0	-278	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCTGGTGTTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	95564986	95549481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
ENSMUSG00000031781.15_95549649_95555069_1	chr8	-	505	4	ISM	ENSMUSG00000031781.15	ENST00000569370.5	1167	6	3473	445	3473	-445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTCAGGCGCTCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	95555069	95549648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95549836_95550280_95550360_95553262_95553337_95554904
ENSMUSG00000031781.15_95549794_95558490_1	chr8	-	525	6	FSM	ENSMUSG00000031781.15	ENST00000569370.5	1167	6	52	590	52	-590	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGGATGCCAGCCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	95558490	95549793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_95549836_95550280_95550360_95553262_95553337_95554904_95555068_95555781_95555859_95558400
ENSMUSG00000031781.15_95551844_95564646_1	chr8	-	834	7	ISM	ENSMUSG00000031781.15	ENSMUST00000034233.15	1807	9	247	2655	247	-2640	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGCTGGGGAGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	95564646	95551843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564581
ENSMUSG00000031781.15_95554973_95564893_1	chr8	-	823	5	ISM	ENSMUSG00000031781.15	ENSMUST00000034233.15	1807	9	0	5784	0	-5769	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAGCCAAACTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	95564893	95554972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564581
ENSMUSG00000031782.16_95564949_95581523_1	chr8	+	1783	9	NNC	ENSMUSG00000031782.16	novel	1789	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1941	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTGTTTTGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	95564948	95581523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95577228_95578478_95578584_95579742_95579899_95580238_95580287_95580741
ENSMUSG00000031782.16_95564949_95581523_2	chr8	+	1783	9	NNC	ENSMUSG00000031782.16	novel	1789	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTGTTTTGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	95564948	95581523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95577228_95578478_95578584_95579742_95579899_95580232_95580287_95580747
ENSMUSG00000031782.16_95565043_95579900_1	chr8	+	528	4	ISM	ENSMUSG00000031782.16	ENST00000567933.5	850	6	1	1110	1	-1110	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGGACTGGCCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	95565042	95579900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95565126_95569245_95569397_95571404_95571541_95579742
ENSMUSG00000031782.16_95565043_95581109_1	chr8	+	1170	8	NNC	ENSMUSG00000031782.16	novel	1180	8	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATTGCTCTCTAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	95565042	95581109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576876_95578478_95578584_95579742_95579899_95580232_95580281_95580741
ENSMUSG00000031782.16_95565043_95581109_2	chr8	+	1176	8	FSM	ENSMUSG00000031782.16	ENST00000567072.5	1180	8	5	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATTGCTCTCTAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	95565042	95581109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576876_95578478_95578584_95579742_95579899_95580232_95580287_95580741
ENSMUSG00000031782.16_95565043_95581109_3	chr8	+	1170	8	NNC	ENSMUSG00000031782.16	novel	1180	8	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2048	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATTGCTCTCTAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	95565042	95581109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576876_95578478_95578584_95579742_95579899_95580232_95580287_95580747
ENSMUSG00000031782.16_95565043_95581109_4	chr8	+	1170	8	NNC	ENSMUSG00000031782.16	novel	1180	8	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2049	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATTGCTCTCTAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	95565042	95581109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576876_95578478_95578584_95579742_95579899_95580238_95580287_95580741
ENSMUSG00000031782.16_95571442_95580965_1	chr8	+	533	4	ISM	ENSMUSG00000031782.16	ENST00000567933.5	850	6	6400	45	6400	-45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATGCCAGGCCTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	95571441	95580965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95571541_95579742_95579899_95580232_95580287_95580741
ENSMUSG00000031783.11_95584211_95590870_1	chr8	+	1447	9	FSM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	133	0	65	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTGCTTTAATTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	95584210	95590870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ENSMUSG00000031786.8_95783386_95799422_1	chr8	+	1233	10	ISM	ENSMUSG00000031786.8	ENST00000360716.8	2366	16	128	5165	128	-5165	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCCGTGTGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	95783385	95799422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95783404_95785022_95785149_95785652_95785848_95788340_95788500_95788804_95789024_95794676_95794809_95797030_95797104_95797868_95797998_95798170_95798300_95799369
ENSMUSG00000031786.8_95785087_95799536_1	chr8	+	1265	9	ISM	ENSMUSG00000031786.8	ENST00000360716.8	2366	16	1829	5051	1829	-5051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTCAAGAAGCTCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	95785086	95799536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95785149_95785652_95785848_95788340_95788500_95788804_95789024_95794676_95794809_95797030_95797104_95797868_95797998_95798170_95798300_95799369
ENSMUSG00000031786.8_95785735_95800779_1	chr8	+	1211	9	ISM	ENSMUSG00000031786.8	ENST00000360716.8	2366	16	2477	3808	2477	-3808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCGGATGAGGACGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	95785734	95800779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95785848_95788340_95788500_95788804_95789024_95794676_95794809_95797030_95797104_95797868_95797998_95798170_95798300_95799369_95799591_95800743
ENSMUSG00000031786.8_95785786_95800831_1	chr8	+	1212	9	ISM	ENSMUSG00000031786.8	ENST00000360716.8	2366	16	2528	3756	2528	-3756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCTTCGCTACCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	95785785	95800831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95785848_95788340_95788500_95788804_95789024_95794676_95794809_95797030_95797104_95797868_95797998_95798170_95798300_95799369_95799591_95800743
ENSMUSG00000031786.8_95785833_95800897_1	chr8	+	1231	9	ISM	ENSMUSG00000031786.8	ENST00000360716.8	2366	16	2575	3690	2575	-3690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGTCGACAGCAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	95785832	95800897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95785848_95788340_95788500_95788804_95789024_95794676_95794809_95797030_95797104_95797868_95797998_95798170_95798300_95799369_95799591_95800743
ENSMUSG00000031786.8_95788444_95801665_1	chr8	+	1220	9	ISM	ENSMUSG00000031786.8	ENSMUST00000058479.7	2832	18	6713	3104	5186	-2922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATGAATCAGCTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	95788443	95801665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95788500_95788804_95789024_95794676_95794809_95797030_95797104_95797868_95797998_95798170_95798300_95799369_95799591_95800743_95800960_95801620
ENSMUSG00000031786.8_95788864_95802895_1	chr8	+	1300	10	ISM	ENSMUSG00000031786.8	ENSMUST00000058479.7	2832	18	7133	1874	5606	-1692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACCTGCGGCAGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	95788863	95802895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95789024_95794676_95794809_95797030_95797104_95797868_95797998_95798170_95798300_95799369_95799591_95800743_95800960_95801620_95801732_95801831_95801943_95802877
ENSMUSG00000031786.8_95788963_95802918_1	chr8	+	1224	10	ISM	ENSMUSG00000031786.8	ENSMUST00000058479.7	2832	18	7232	1851	5705	-1669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGGACTACCTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	95788962	95802918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95789024_95794676_95794809_95797030_95797104_95797868_95797998_95798170_95798300_95799369_95799591_95800743_95800960_95801620_95801732_95801831_95801943_95802877
ENSMUSG00000031786.8_95789003_95803085_1	chr8	+	1351	10	ISM	ENSMUSG00000031786.8	ENSMUST00000058479.7	2832	18	7272	1684	5745	-1502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCAGGGGAGGTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	95789002	95803085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95789024_95794676_95794809_95797030_95797104_95797868_95797998_95798170_95798300_95799369_95799591_95800743_95800960_95801620_95801732_95801831_95801943_95802877
ENSMUSG00000031786.8_95794675_95803085_1	chr8	+	1332	9	ISM	ENSMUSG00000031786.8	ENSMUST00000058479.7	2832	18	12944	1684	11417	-1502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCAGGGGAGGTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	95794674	95803085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95794809_95797030_95797104_95797868_95797998_95798170_95798300_95799369_95799591_95800743_95800960_95801620_95801732_95801831_95801943_95802877
ENSMUSG00000031786.8_95797030_95804440_1	chr8	+	1326	9	ISM	ENSMUSG00000031786.8	ENSMUST00000058479.7	2832	18	15299	329	13772	-147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGGCAGAGCCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	95797029	95804440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95797104_95797868_95797998_95798170_95798300_95799369_95799591_95800743_95800960_95801620_95801732_95801831_95801943_95802877_95803073_95804300
ENSMUSG00000031786.8_95797867_95804587_1	chr8	+	1318	9	ISM	ENSMUSG00000031786.8	ENSMUST00000058479.7	2832	18	16136	182	14609	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATAGACTTCGTAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	95797866	95804587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95797998_95798170_95798300_95799369_95799591_95800743_95800960_95801620_95801732_95801831_95801943_95802877_95803073_95804300_95804441_95804523
ENSMUSG00000031788.15_95826930_95836431_1	chr8	-	1920	14	ISM	ENSMUSG00000031788.15	ENST00000562903.5	2369	16	963	12	621	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	975	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGAGTCTCTGTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	95836431	95826929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95827119_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411
ENSMUSG00000031788.15_95827077_95836457_1	chr8	-	1799	14	ISM	ENSMUSG00000031788.15	ENST00000562903.5	2369	16	937	159	595	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGGCCAGTGCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	95836457	95827076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95827119_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411
ENSMUSG00000031788.15_95828698_95836887_1	chr8	-	1914	13	ISM	ENSMUSG00000031788.15	ENST00000562903.5	2369	16	507	1780	165	-1768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCCTGGGTCCCGCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	95836887	95828697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757
ENSMUSG00000031788.15_95828729_95836809_1	chr8	-	1805	13	ISM	ENSMUSG00000031788.15	ENST00000562903.5	2369	16	585	1811	243	-1799	internal_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGCTGAGAGGGTTCGC	NA	NA	NA	NA	NA	NA	NA	NA	95836809	95828728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757
ENSMUSG00000031788.15_95828972_95837441_1	chr8	-	1974	13	ISM	ENSMUSG00000031788.15	ENST00000562903.5	2369	16	-47	2054	-47	-2042	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	682	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCCTGAGGTTCAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	95837441	95828971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321
ENSMUSG00000031788.15_95834983_95837441_1	chr8	-	957	6	ISM	ENSMUSG00000031788.15	ENST00000562903.5	2369	16	-47	8065	-47	-8053	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCAAGCCCCTTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	95837441	95834982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321
ENSMUSG00000031788.15_95835097_95861395_1	chr8	-	840	7	ISM	ENSMUSG00000031788.15	ENST00000421376.6	2802	18	3093	8190	3093	-8167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACGCTGCAGCCTGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	95861395	95835096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344
ENSMUSG00000031788.15_95835308_95864248_1	chr8	-	856	7	ISM	ENSMUSG00000031788.15	ENST00000421376.6	2802	18	240	8401	240	-8378	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGAGGAGATGCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	95864248	95835307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864202
ENSMUSG00000031788.15_95836412_95864526_1	chr8	-	917	5	ISM	ENSMUSG00000031788.15	ENST00000421376.6	2802	18	-38	9505	-38	-9482	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGCCAGATAGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	95864526	95836411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864202
ENSMUSG00000031791.9_73325935_73339906_1	chr8	+	886	6	FSM	ENSMUSG00000031791.9	ENSMUST00000034244.9	2124	6	18	1220	18	-113	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGACCAAGAAAGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	73325934	73339906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_73326072_73333406_73333564_73333803_73333989_73335028_73335117_73338543_73338662_73339705
ENSMUSG00000031791.9_73326043_73340019_1	chr8	+	891	6	FSM	ENSMUSG00000031791.9	ENSMUST00000034244.9	2124	6	126	1107	126	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCCCCCCGCCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	73326042	73340019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_73326072_73333406_73333564_73333803_73333989_73335028_73335117_73338543_73338662_73339705
ENSMUSG00000031791.9_73335066_73340367_1	chr8	+	831	3	ISM	ENSMUSG00000031791.9	ENSMUST00000034244.9	2124	6	9149	759	9149	348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACTCCTGCTGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	73335065	73340367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_73335117_73338543_73338662_73339705
ENSMUSG00000031791.9_73338631_73340540_1	chr8	+	866	2	ISM	ENSMUSG00000031791.9	ENSMUST00000034244.9	2124	6	12714	586	12714	521	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGCAGGCTGCTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	73338630	73340540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_73338662_73339705
ENSMUSG00000031792.16_96058912_96073261_1	chr8	+	829	6	NNC	ENSMUSG00000031792.16	novel	821	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	1049	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCCCGTGCCTCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	96058911	96073261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_96059094_96059995_96060163_96065261_96065446_96070585_96070691_96071916_96072001_96073154
ENSMUSG00000031792.16_96058912_96073261_2	chr8	+	829	6	NNC	ENSMUSG00000031792.16	novel	821	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCCCGTGCCTCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	96058911	96073261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_96059094_96059995_96060167_96065266_96065446_96070584_96070691_96071916_96072001_96073154
ENSMUSG00000031792.16_96058912_96073261_3	chr8	+	830	6	FSM	ENSMUSG00000031792.16	ENST00000539737.6	821	6	-9	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCCCGTGCCTCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	96058911	96073261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_96059094_96059995_96060163_96065261_96065446_96070584_96070691_96071916_96072001_96073154
ENSMUSG00000031792.16_96065298_96070607_1	chr8	+	225	3	ISM	ENSMUSG00000031792.16	ENSMUST00000034245.16	1758	7	6386	3528	6377	-2654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGGGCATGCCCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	96065297	96070607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_96065446_96069749_96069804_96070584
ENSMUSG00000031792.16_96069780_96072000_1	chr8	+	214	3	ISM	ENSMUSG00000031792.16	ENSMUST00000034245.16	1758	7	10868	2135	10859	-1261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATTTCCAGAGCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	96069779	96072000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_96069804_96070584_96070691_96071916
ENSMUSG00000031796.8_96146877_96161385_1	chr8	-	1183	6	FSM	ENSMUSG00000031796.8	ENSMUST00000034249.8	1295	6	112	0	87	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	96161385	96146876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96151244_96151325_96161115
ENSMUSG00000031796.8_96146877_96161385_2	chr8	-	1177	6	NNC	ENSMUSG00000031796.8	novel	1295	6	NA	NA	87	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	96161385	96146876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_96147298_96147763_96147875_96148691_96148875_96149410_96149523_96151244_96151325_96161115
ENSMUSG00000031796.8_96146877_96161385_3	chr8	-	1177	6	NNC	ENSMUSG00000031796.8	novel	1295	6	NA	NA	87	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	96161385	96146876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_96147298_96147763_96147875_96148685_96148875_96149416_96149523_96151244_96151325_96161115
ENSMUSG00000031796.8_96146877_96161472_1	chr8	-	1264	6	NNC	ENSMUSG00000031796.8	novel	1295	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	96161472	96146876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_96147298_96147763_96147875_96148685_96148875_96149416_96149523_96151244_96151325_96161115
ENSMUSG00000031796.8_96146877_96161472_2	chr8	-	1264	6	NNC	ENSMUSG00000031796.8	novel	1295	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	96161472	96146876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_96147298_96147763_96147875_96148691_96148875_96149410_96149523_96151244_96151325_96161115
ENSMUSG00000031799.11_72889073_72906081_1	chr8	+	1253	8	FSM	ENSMUSG00000031799.11	ENSMUST00000003575.11	2158	8	0	905	0	-903	multi-exon	FALSE	canonical	NA	NA	NA	NA	2430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTGGAAATTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	72889072	72906081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ENSMUSG00000031799.11_72889234_72906177_1	chr8	+	1188	8	FSM	ENSMUSG00000031799.11	ENSMUST00000003575.11	2158	8	161	809	161	-807	multi-exon	FALSE	canonical	NA	NA	NA	NA	2511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGGCCCTGTGCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	72889233	72906177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ENSMUSG00000031799.11_72889652_72906627_1	chr8	+	1687	8	FSM	ENSMUSG00000031799.11	ENSMUST00000238492.2	2044	8	0	357	0	-357	multi-exon	FALSE	canonical	NA	NA	NA	NA	8481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAAGACCAAGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	72889651	72906627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_72889765_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ENSMUSG00000031799.11_72892432_72906312_1	chr8	+	1259	7	ISM	ENSMUSG00000031799.11	ENSMUST00000238492.2	2044	8	2780	672	2780	-672	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGAGGAGCAAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	72892431	72906312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ENSMUSG00000031799.11_72897292_72906419_1	chr8	+	1234	6	ISM	ENSMUSG00000031799.11	ENSMUST00000238492.2	2044	8	7640	565	7640	-565	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAAACTCTGTCTCAAATA	NA	NA	NA	NA	NA	NA	NA	NA	72897291	72906419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ENSMUSG00000031799.11_72897292_72906419_2	chr8	+	1228	6	NNC	ENSMUSG00000031799.11	novel	2158	8	NA	NA	7640	-565	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAAACTCTGTCTCAAATA	NA	NA	NA	NA	NA	NA	NA	NA	72897291	72906419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901047_72901112_72905585
ENSMUSG00000031799.11_72898520_72906612_1	chr8	+	1309	5	ISM	ENSMUSG00000031799.11	ENSMUST00000238492.2	2044	8	8868	372	8868	-372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCGGGAATGACACTAATA	NA	NA	NA	NA	NA	NA	NA	NA	72898519	72906612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ENSMUSG00000031799.11_72898520_72906986_1	chr8	+	1683	5	ISM	ENSMUSG00000031799.11	ENSMUST00000238492.2	2044	8	8868	-2	8868	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGATTTATTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	72898519	72906986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ENSMUSG00000031807.11_72044935_72047766_1	chr8	+	486	4	ISM	ENSMUSG00000031807.11	ENSMUST00000034264.11	893	5	115	1147	0	-1147	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAACGCTTCCTGTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	72044934	72047766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72045149_72046727_72046836_72047312_72047415_72047704
ENSMUSG00000031807.11_72045094_72048731_1	chr8	+	437	5	FSM	ENSMUSG00000031807.11	ENSMUST00000034264.11	893	5	274	182	159	-182	multi-exon	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCGCCTTGGTGCAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	72045093	72048731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_72045149_72046727_72046836_72047312_72047415_72047704_72047846_72048700
ENSMUSG00000031807.11_72046758_72048801_1	chr8	+	422	4	ISM	ENSMUSG00000031807.11	ENSMUST00000143441.2	1062	5	1823	112	1823	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGCCCTTCGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	72046757	72048801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72046836_72047312_72047415_72047704_72047846_72048700
ENSMUSG00000031807.11_72047310_72048913_1	chr8	+	459	3	ISM	ENSMUSG00000031807.11	ENSMUST00000143441.2	1062	5	2375	0	2375	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTTCTGTGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72047309	72048913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72047415_72047704_72047846_72048700
ENSMUSG00000031808.8_72021571_72036812_1	chr8	+	1252	9	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	0	2540	0	-2537	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCGACGTGGAGCAGCGACA	NA	NA	NA	NA	NA	NA	NA	NA	72021570	72036812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72021668_72021985_72022093_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761
ENSMUSG00000031808.8_72021986_72036875_1	chr8	+	1218	8	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	415	2477	415	-2474	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGAGTTCACGCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	72021985	72036875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72022093_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761
ENSMUSG00000031808.8_72023299_72037085_1	chr8	+	1295	8	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	1728	2267	1728	-2264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTATCCTCACGCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	72023298	72037085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063
ENSMUSG00000031808.8_72023471_72037116_1	chr8	+	1154	8	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	1900	2236	1900	-2233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTCAAGGTCAATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	72023470	72037116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063
ENSMUSG00000031808.8_72023509_72037190_1	chr8	+	1190	8	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	1938	2162	1938	-2159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTGGCCCTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	72023508	72037190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063
ENSMUSG00000031808.8_72032054_72037294_1	chr8	+	1178	8	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	10483	2058	10483	-2055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCAGATCAACCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	72032053	72037294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276
ENSMUSG00000031808.8_72032213_72037558_1	chr8	+	1212	9	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	10642	1794	10642	-1791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGAGAACGTGTCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	72032212	72037558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485
ENSMUSG00000031808.8_72032375_72038051_1	chr8	+	1204	10	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	10804	1301	10804	-1298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATGTACCAGGAATTACA	NA	NA	NA	NA	NA	NA	NA	NA	72032374	72038051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989
ENSMUSG00000031808.8_72032625_72038597_1	chr8	+	1199	10	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	11054	755	11054	-752	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACCTCAGACAGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	72032624	72038597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ENSMUSG00000031808.8_72036761_72038949_1	chr8	+	1185	6	NNC	ENSMUSG00000031808.8	novel	2730	13	NA	NA	15190	-400	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTGGACCAGTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	72036760	72038949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_72036972_72037063_72037191_72037276_72037415_72037485_72037644_72037989_72038137_72038545
ENSMUSG00000031808.8_72036798_72038963_1	chr8	+	1169	6	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	15227	389	15227	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGGGGTACAGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	72036797	72038963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ENSMUSG00000031808.8_72036885_72039058_1	chr8	+	1170	6	NNC	ENSMUSG00000031808.8	novel	2730	13	NA	NA	15314	-291	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGGGGCCCACATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	72036884	72039058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_72036972_72037063_72037191_72037276_72037415_72037485_72037644_72037989_72038137_72038545
ENSMUSG00000031808.8_72037111_72039173_1	chr8	+	1158	5	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	15540	179	15540	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTACTTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	72037110	72039173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ENSMUSG00000031808.8_72037160_72039226_1	chr8	+	1162	5	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	15589	126	15589	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGTTTCTCTGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	72037159	72039226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ENSMUSG00000031808.8_72037276_72039352_1	chr8	+	1258	4	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	15705	0	15705	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	72037275	72039352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72037415_72037485_72037651_72037989_72038137_72038545
ENSMUSG00000031812.17_122317100_122325138_1	chr8	+	2171	4	FSM	ENSMUSG00000031812.17	ENSMUST00000034270.17	2532	4	0	361	0	-361	multi-exon	FALSE	canonical	NA	NA	NA	NA	2201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTGTCAGCAGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	122317099	122325138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_122317304_122320228_122320285_122322724_122322832_122323334
ENSMUSG00000031812.17_122317223_122325238_1	chr8	+	2148	4	FSM	ENSMUSG00000031812.17	ENSMUST00000034270.17	2532	4	123	261	0	-261	multi-exon	FALSE	canonical	NA	NA	NA	NA	3371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACAAAAGATCTGAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	122317222	122325238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_122317304_122320228_122320285_122322724_122322832_122323334
ENSMUSG00000031812.17_122317223_122325355_1	chr8	+	2265	4	FSM	ENSMUSG00000031812.17	ENSMUST00000034270.17	2532	4	123	144	0	-144	multi-exon	FALSE	canonical	NA	NA	NA	NA	7486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGAGTTCCAGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	122317222	122325355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_122317304_122320228_122320285_122322724_122322832_122323334
ENSMUSG00000031812.17_122322725_122325355_1	chr8	+	2127	2	NNC	ENSMUSG00000031812.17	novel	2532	4	NA	NA	5274	-144	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	4571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGAGTTCCAGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	122322724	122325355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_122322832_122323335
ENSMUSG00000031812.17_122322725_122325499_1	chr8	+	2272	2	ISM	ENSMUSG00000031812.17	ENSMUST00000034270.17	2532	4	5625	0	5274	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGTACAATTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	122322724	122325499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_122322832_122323334
ENSMUSG00000031813.9_71995587_71998261_1	chr8	+	509	5	ISM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	13	2409	13	-2409	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCCAGGACATGCGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	71995586	71998261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71995702_71995776_71995876_71996030_71996128_71997867_71997995_71998190
ENSMUSG00000031813.9_71996029_71999678_1	chr8	+	515	5	ISM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	455	992	455	-992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCAGCACTGTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	71996028	71999678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71996128_71997867_71997995_71998190_71998311_71998393_71998501_71999616
ENSMUSG00000031813.9_71997931_72000459_1	chr8	+	464	6	ISM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	2357	211	2357	-211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCATAGACCAGCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	71997930	72000459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
ENSMUSG00000031813.9_71997961_72000532_1	chr8	+	507	6	ISM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	2387	138	2387	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAACTGCTTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	71997960	72000532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
ENSMUSG00000031816.16_121824294_121831244_1	chr8	-	1033	7	ISM	ENSMUSG00000031816.16	ENSMUST00000139782.8	1366	10	3805	-2	2470	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTATGTTTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	121831244	121824293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_121824665_121825446_121825511_121825737_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130
ENSMUSG00000031816.16_121825447_121833712_1	chr8	-	1107	7	FSM	ENSMUSG00000031816.16	ENST00000634347.1	1112	7	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAACCCCCAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	121833712	121825446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608
ENSMUSG00000031816.16_121829709_121832371_1	chr8	-	208	3	ISM	ENSMUSG00000031816.16	ENST00000634347.1	1112	7	1343	4265	1343	-4265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGTGTTCTTGTGGATC	NA	NA	NA	NA	NA	NA	NA	NA	121832371	121829708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_121829744_121831130_121831245_121832312
ENSMUSG00000031816.16_121831214_121833668_1	chr8	-	205	3	ISM	ENSMUSG00000031816.16	ENST00000634347.1	1112	7	46	5770	46	-5770	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCGAACAGGGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	121833668	121831213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_121831245_121832312_121832427_121833608
ENSMUSG00000031818.13_121394961_121400946_1	chr8	+	737	5	NNC	ENSMUSG00000031818.13	novel	745	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	121394960	121400946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_121395091_121396047_121396122_121399467_121399632_121399959_121400092_121400709
ENSMUSG00000031818.13_121395000_121400852_1	chr8	+	632	5	FSM	ENSMUSG00000031818.13	ENST00000561569.5	600	5	-29	-3	-29	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTGCCGGCTCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	121394999	121400852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_121395095_121396027_121396122_121399463_121399632_121399959_121400092_121400709
ENSMUSG00000031819.14_121384282_121387558_1	chr8	-	907	4	ISM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	7302	3629	7268	290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCACATCTTCAGAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	121387558	121384281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522
ENSMUSG00000031819.14_121384572_121394742_1	chr8	-	905	5	FSM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	118	3919	84	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGTACACGGTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	121394742	121384571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121387600_121394495
ENSMUSG00000031819.14_121384572_121394852_1	chr8	-	1015	5	FSM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	8	3919	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGTACACGGTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	121394852	121384571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121387600_121394495
ENSMUSG00000031820.10_71849505_71855452_1	chr8	+	854	7	ISM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	0	1811	0	-1811	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCACCATCCTGGTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	71849504	71855452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389
ENSMUSG00000031820.10_71849612_71855513_1	chr8	+	797	6	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	107	-1750	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGGTGAGCCTGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	71849611	71855513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852466_71855389
ENSMUSG00000031820.10_71850321_71855706_1	chr8	+	850	7	ISM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	816	1557	816	-1557	internal_fragment	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGATGTCACCACAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	71850320	71855706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619
ENSMUSG00000031820.10_71850321_71855707_1	chr8	+	840	6	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	816	-1556	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGATGTCACCACAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	71850320	71855707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_71850670_71851035_71851095_71852169_71852291_71852372_71852466_71855389_71855520_71855619
ENSMUSG00000031820.10_71850479_71856926_1	chr8	+	780	8	ISM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	974	337	974	-337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGCATGGCCAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	71850478	71856926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
ENSMUSG00000031820.10_71850485_71856955_1	chr8	+	792	7	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	980	-308	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCTGCAAAGACCCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	71850484	71856955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_71850670_71851035_71851095_71852169_71852291_71852372_71852466_71855389_71855520_71855619_71855707_71856838
ENSMUSG00000031820.10_71850580_71857029_1	chr8	+	782	8	ISM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	1075	234	1075	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGTGTGAACTATGA	NA	NA	NA	NA	NA	NA	NA	NA	71850579	71857029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
ENSMUSG00000031820.10_71850597_71857066_1	chr8	+	791	7	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	1092	-197	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCTATGAGGAGAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	71850596	71857066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_71850670_71851035_71851095_71852169_71852291_71852372_71852466_71855389_71855520_71855619_71855707_71856838
ENSMUSG00000031820.10_71851066_71857155_1	chr8	+	788	7	ISM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	1561	108	1561	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGTCACCGGAATAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	71851065	71857155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
ENSMUSG00000031820.10_71852170_71857264_2	chr8	+	872	5	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	2665	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTATGGCTTCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	71852169	71857264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_71852291_71852372_71852452_71855360_71855520_71855619_71855707_71856838
ENSMUSG00000031820.10_71852170_71857264_3	chr8	+	868	6	ISM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	2665	-1	2665	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTATGGCTTCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	71852169	71857264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
ENSMUSG00000031821.12_121307440_121315478_1	chr8	-	1353	4	ISM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	565	2068	565	-2068	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAATTACATGAGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	121315478	121307439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463
ENSMUSG00000031821.12_121307618_121315773_1	chr8	-	1384	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	270	2246	270	-2246	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCAGTGCTGTGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	121315773	121307617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
ENSMUSG00000031821.12_121307773_121315904_1	chr8	-	1360	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	139	2401	139	-2401	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGTACTTGAAAGAGTACAG	NA	NA	NA	NA	NA	NA	NA	NA	121315904	121307772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
ENSMUSG00000031821.12_121307836_121316043_1	chr8	-	1436	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	0	2464	0	-2464	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGAAGTAAGCACTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	121316043	121307835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
ENSMUSG00000031823.15_120808480_120810015_1	chr8	-	1023	2	ISM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	18206	851	18206	-851	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGGGGCCATGAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	120810015	120808479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_120809456_120809968
ENSMUSG00000031823.15_120808800_120813400_1	chr8	-	999	5	ISM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	14821	1171	14821	-1171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTGTGAGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	120813400	120808799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367
ENSMUSG00000031823.15_120808852_120813453_1	chr8	-	1000	5	ISM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	14768	1223	14768	-1223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGCAAGTCTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	120813453	120808851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367
ENSMUSG00000031823.15_120809142_120814814_1	chr8	-	1071	6	ISM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	13407	1513	13407	-1513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTGTACTGCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	120814814	120809141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492
ENSMUSG00000031823.15_120809339_120827861_1	chr8	-	999	8	FSM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	360	1710	360	-1710	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGACTCAGGCGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	120827861	120809338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827830
ENSMUSG00000031823.15_120809395_120827921_1	chr8	-	1003	8	FSM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	300	1766	300	-1766	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTCTGTCTTCGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	120827921	120809394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827830
ENSMUSG00000031823.15_120811611_120828221_1	chr8	-	1083	6	ISM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	0	3982	0	-3982	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTGCGTCCGAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	120828221	120811610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827830
ENSMUSG00000031826.21_120637596_120668417_1	chr8	+	886	5	NNC	ENSMUSG00000031826.21	novel	2662	15	NA	NA	24	-15182	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGGGCTGCCATGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	120637595	120668417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_120637679_120641835_120641946_120658587_120658657_120663269_120663328_120667851
ENSMUSG00000031826.21_120658585_120683716_1	chr8	+	2568	13	ISM	ENSMUSG00000031826.21	ENST00000570191.5	2662	15	21013	-117	21013	117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGAAGAACCGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	120658584	120683716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ENSMUSG00000031826.21_120663308_120683836_1	chr8	+	2578	12	ISM	ENSMUSG00000031826.21	ENST00000570191.5	2662	15	25736	-237	25736	237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1053	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTTCCTTAAAAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	120663307	120683836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ENSMUSG00000031826.21_120668096_120674475_1	chr8	+	910	3	ISM	ENSMUSG00000031826.21	ENST00000570191.5	2662	15	30524	9124	30524	-9124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGATGAAGTTCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	120668095	120674475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120668878_120673813_120673906_120674439
ENSMUSG00000031826.21_120668166_120684167_1	chr8	+	2575	11	ISM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	30613	132	30594	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTCCCAGTGTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	120668165	120684167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ENSMUSG00000031826.21_120668229_120684294_1	chr8	+	2639	11	ISM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	30676	5	30657	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCTGTGTTTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	120668228	120684294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ENSMUSG00000031826.21_120668304_120684299_1	chr8	+	2569	11	ISM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	30751	0	30732	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120668303	120684299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ENSMUSG00000031826.21_120668378_120677131_1	chr8	+	896	6	ISM	ENSMUSG00000031826.21	ENST00000570191.5	2662	15	30806	6468	30806	-6468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCCTCAATGGACTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	120668377	120677131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097
ENSMUSG00000031826.21_120668588_120678787_1	chr8	+	880	7	ISM	ENSMUSG00000031826.21	ENST00000570191.5	2662	15	31016	4812	31016	-4812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGACTTCGTCCAGACGCC	NA	NA	NA	NA	NA	NA	NA	NA	120668587	120678787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659
ENSMUSG00000031826.21_120668689_120680030_1	chr8	+	941	8	ISM	ENSMUSG00000031826.21	ENST00000570191.5	2662	15	31117	3569	31117	-3569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGTGGCCAGGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	120668688	120680030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918
ENSMUSG00000031826.21_120674487_120682991_1	chr8	+	867	8	ISM	ENSMUSG00000031826.21	ENST00000570191.5	2662	15	36915	608	36915	-608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTGCAGGTGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	120674486	120682991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936
ENSMUSG00000031826.21_120675153_120683369_1	chr8	+	867	8	ISM	ENSMUSG00000031826.21	ENST00000570191.5	2662	15	37581	230	37581	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCTTCCAGATTGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	120675152	120683369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ENSMUSG00000031826.21_120677131_120683608_1	chr8	+	909	6	ISM	ENSMUSG00000031826.21	ENST00000570191.5	2662	15	39559	-9	39559	9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCGTGGGCTTGGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	120677130	120683608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ENSMUSG00000031827.14_120535964_120567236_1	chr8	-	1546	4	FSM	ENSMUSG00000031827.14	ENSMUST00000034285.14	1596	4	47	3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAATGAGTTGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	120567236	120535963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_120537095_120549392_120549551_120566880_120566964_120567062
ENSMUSG00000031834.16_71220820_71225310_1	chr8	-	2332	14	ISM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	4047	0	4047	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCTTTGGGGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	71225310	71220819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246
ENSMUSG00000031834.16_71221105_71227600_1	chr8	-	2377	15	ISM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	1757	285	1757	-285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCGCGGACCCCAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	71227600	71221104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299
ENSMUSG00000031834.16_71221284_71227713_1	chr8	-	2311	15	ISM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	1644	464	1644	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTGAACACGCGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	71227713	71221283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299
ENSMUSG00000031834.16_71221733_71227906_1	chr8	-	2219	14	ISM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	1451	913	1451	-913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGCTGTTACGCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	71227906	71221732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299
ENSMUSG00000031834.16_71221840_71229323_1	chr8	-	2275	15	ISM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	34	1020	34	-1020	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACGAGGAGCGCACGTG	NA	NA	NA	NA	NA	NA	NA	NA	71229323	71221839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
ENSMUSG00000031835.17_120234895_120249282_1	chr8	-	1776	9	ISM	ENSMUSG00000031835.17	ENSMUST00000098362.11	4336	24	36184	0	36184	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	120249282	120234894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217
ENSMUSG00000031835.17_120235032_120251224_1	chr8	-	1749	10	ISM	ENSMUSG00000031835.17	ENSMUST00000098362.11	4336	24	34242	137	34242	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCGCGGATGTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	120251224	120235031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165
ENSMUSG00000031835.17_120235203_120252196_1	chr8	-	1782	11	ISM	ENSMUSG00000031835.17	ENSMUST00000098362.11	4336	24	33270	308	33270	-308	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTACAGGCTATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	120252196	120235202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106
ENSMUSG00000031835.17_120235407_120255737_1	chr8	-	1752	12	ISM	ENSMUSG00000031835.17	ENSMUST00000098362.11	4336	24	29729	512	29729	-512	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGGCTATCTTACTG	NA	NA	NA	NA	NA	NA	NA	NA	120255737	120235406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662
ENSMUSG00000031835.17_120237004_120260211_1	chr8	-	1817	13	ISM	ENSMUSG00000031835.17	ENSMUST00000098362.11	4336	24	25255	2109	25255	-2109	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTGGAGGTGAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	120260211	120237003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059
ENSMUSG00000031835.17_120240644_120262095_1	chr8	-	1748	13	ISM	ENSMUSG00000031835.17	ENSMUST00000098362.11	4336	24	23371	5749	23371	-5749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACAGCCTTTGAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	120262095	120240643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013
ENSMUSG00000031835.17_120247020_120268871_1	chr8	-	1744	14	ISM	ENSMUSG00000031835.17	ENSMUST00000098362.11	4336	24	16595	12125	16595	-12125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACCAAGGTAAAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	120268871	120247019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813
ENSMUSG00000031835.17_120247789_120269524_1	chr8	-	1737	14	ISM	ENSMUSG00000031835.17	ENSMUST00000098362.11	4336	24	15942	12894	15942	-12894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTCAGTGACGGCCTATA	NA	NA	NA	NA	NA	NA	NA	NA	120269524	120247788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463
ENSMUSG00000031835.17_120249223_120272869_1	chr8	-	1792	13	ISM	ENSMUSG00000031835.17	ENSMUST00000098362.11	4336	24	12597	14328	12597	-14328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTGAGCAGCAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	120272869	120249222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722
ENSMUSG00000031837.15_120176803_120181117_1	chr8	+	172	3	ISM	ENSMUSG00000031837.15	ENST00000565691.5	1004	10	81	17453	81	-17453	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACTATGAAGATGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	120176802	120181117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120176846_120178820_120178930_120181097
ENSMUSG00000031837.15_120178877_120189347_1	chr8	+	199	3	ISM	ENSMUSG00000031837.15	ENST00000565691.5	1004	10	2155	9223	2155	-9223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGGAGACAGCCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	120178876	120189347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120178930_120181097_120181196_120189299
ENSMUSG00000031837.15_120189396_120191912_1	chr8	+	181	3	ISM	ENSMUSG00000031837.15	ENST00000565691.5	1004	10	12674	6658	12674	-6658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGCTGGAGGGCCAGATA	NA	NA	NA	NA	NA	NA	NA	NA	120189395	120191912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120189437_120191640_120191760_120191891
ENSMUSG00000031837.15_120191732_120195027_1	chr8	+	182	4	ISM	ENSMUSG00000031837.15	ENST00000565691.5	1004	10	15010	3543	15010	-3543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAATGGCCGTGTGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	120191731	120195027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120191760_120191891_120191972_120194329_120194384_120195007
ENSMUSG00000031837.15_120197647_120198570_1	chr8	+	170	2	ISM	ENSMUSG00000031837.15	ENST00000565691.5	1004	10	20925	0	20925	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGGGCCGGGGACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	120197646	120198570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120197725_120198478
ENSMUSG00000031840.15_71207360_71211281_1	chr8	+	1140	4	FSM	ENSMUSG00000031840.15	ENST00000464076.3	1108	4	2	-34	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACGCAGTCCTTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	71207359	71211281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_71207518_71209093_71209213_71209783_71209909_71210543
ENSMUSG00000031840.15_71207360_71211281_2	chr8	+	1135	4	NIC	ENSMUSG00000031840.15	novel	1363	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACGCAGTCCTTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	71207359	71211281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_71207513_71209093_71209213_71209783_71209909_71210543
ENSMUSG00000031840.15_71207373_71210954_1	chr8	+	1028	5	FSM	ENSMUSG00000031840.15	ENSMUST00000110093.9	1442	5	45	369	0	-293	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTCAGTTGTGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	71207372	71210954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_71207518_71208502_71208731_71209093_71209213_71209783_71209909_71210543
ENSMUSG00000031841.20_119232400_119694837_1	chr8	+	584	5	ISM	ENSMUSG00000031841.20	ENSMUST00000117160.2	3785	14	221928	356823	-169357	-355644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGGAAGTCATTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	119232399	119694837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_119232455_119401756_119401966_119484106_119484224_119578457_119578611_119694787
ENSMUSG00000031841.20_119401765_120051660_1	chr8	+	3494	12	FSM	ENSMUSG00000031841.20	ENST00000567109.6	3546	12	8	44	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGCTGGGCAGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	119401764	120051660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_119401966_119484106_119484224_119578457_119578611_119694787_119694933_119821923_119822103_119925593_119925735_119963522_119963706_119968928_119969183_120015324_120015468_120039240_120039475_120040711_120040929_120050133
ENSMUSG00000031841.20_119401851_120051704_1	chr8	+	3457	12	ISM	ENSMUSG00000031841.20	ENSMUST00000117160.2	3785	14	391379	-44	94	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGTCTGACGCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	119401850	120051704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_119401966_119484106_119484224_119578457_119578611_119694787_119694933_119821923_119822103_119925593_119925735_119963522_119963706_119968928_119969183_120015324_120015468_120039240_120039475_120040711_120040934_120050133
ENSMUSG00000031841.20_119401851_120051704_2	chr8	+	3446	12	NNC	ENSMUSG00000031841.20	novel	3546	12	NA	NA	94	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGTCTGACGCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	119401850	120051704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_119401966_119484106_119484224_119578457_119578611_119694787_119694933_119821923_119822103_119925593_119925735_119963522_119963700_119968928_119969183_120015324_120015468_120039240_120039475_120040711_120040929_120050133
ENSMUSG00000031841.20_119401851_120051704_3	chr8	+	3448	12	NNC	ENSMUSG00000031841.20	novel	3546	12	NA	NA	94	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGTCTGACGCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	119401850	120051704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_119401966_119484106_119484224_119578457_119578611_119694787_119694933_119821923_119822103_119925593_119925735_119963522_119963706_119968928_119969183_120015324_120015468_120039240_120039475_120040711_120040934_120050142
ENSMUSG00000031841.20_119401851_120051704_4	chr8	+	3445	12	NNC	ENSMUSG00000031841.20	novel	3546	12	NA	NA	94	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGTCTGACGCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	119401850	120051704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_119401966_119484106_119484224_119578457_119578611_119694787_119694933_119821923_119822103_119925593_119925735_119963529_119963706_119968928_119969183_120015324_120015468_120039240_120039475_120040711_120040929_120050133
ENSMUSG00000031841.20_119401851_120051704_5	chr8	+	3452	12	FSM	ENSMUSG00000031841.20	ENST00000567109.6	3546	12	94	0	94	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGTCTGACGCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	119401850	120051704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_119401966_119484106_119484224_119578457_119578611_119694787_119694933_119821923_119822103_119925593_119925735_119963522_119963706_119968928_119969183_120015324_120015468_120039240_120039475_120040711_120040929_120050133
ENSMUSG00000031842.16_71182806_71202505_1	chr8	+	1669	14	FSM	ENSMUSG00000031842.16	ENST00000355502.7	1959	14	5	285	5	-285	multi-exon	TRUE	canonical	NA	NA	NA	NA	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCGCTCAGCCATTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	71182805	71202505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_71182934_71197922_71198115_71198515_71198553_71198636_71198698_71199138_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
ENSMUSG00000031842.16_71182833_71202539_1	chr8	+	1669	14	NNC	ENSMUSG00000031842.16	novel	1959	14	NA	NA	32	-251	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGCACCCCGATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	71182832	71202539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_71182934_71197922_71198115_71198515_71198553_71198636_71198698_71199138_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200470_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
ENSMUSG00000031842.16_71182849_71202529_1	chr8	+	1630	13	NNC	ENSMUSG00000031842.16	novel	1959	14	NA	NA	48	-261	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGCTGACCTAGTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	71182848	71202529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_71182934_71197922_71198115_71198619_71198698_71199138_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
ENSMUSG00000031842.16_71182865_71202550_1	chr8	+	1655	14	FSM	ENSMUSG00000031842.16	ENST00000355502.7	1959	14	64	240	64	-240	multi-exon	FALSE	canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGATGCTCAGGAGCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	71182864	71202550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_71182934_71197922_71198115_71198515_71198553_71198636_71198698_71199138_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
ENSMUSG00000031842.16_71182918_71202598_1	chr8	+	1650	14	FSM	ENSMUSG00000031842.16	ENST00000355502.7	1959	14	117	192	117	-192	multi-exon	FALSE	canonical	NA	NA	NA	NA	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAGTAGGATTCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	71182917	71202598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_71182934_71197922_71198115_71198515_71198553_71198636_71198698_71199138_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
ENSMUSG00000031842.16_71195728_71200629_1	chr8	+	1136	9	ISM	ENSMUSG00000031842.16	ENST00000262805.16	1937	14	-60	2161	47	-2161	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACACCCAGCCAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	71195727	71200629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71195899_71197922_71198115_71198515_71198553_71198636_71198698_71199138_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463
ENSMUSG00000031842.16_71195845_71200745_1	chr8	+	1058	10	ISM	ENSMUSG00000031842.16	ENST00000262805.16	1937	14	57	2045	57	-2045	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGCTATACACGACGTA	NA	NA	NA	NA	NA	NA	NA	NA	71195844	71200745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71195899_71197922_71198115_71198515_71198553_71198636_71198698_71199138_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705
ENSMUSG00000031842.16_71197922_71202686_1	chr8	+	1714	13	NNC	ENSMUSG00000031842.16	novel	1959	14	NA	NA	2134	-104	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAAGAGGAGGATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	71197921	71202686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_71198115_71198515_71198553_71198636_71198698_71199138_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201880_71202055_71202489
ENSMUSG00000031842.16_71197922_71202686_2	chr8	+	1717	13	NNC	ENSMUSG00000031842.16	novel	1959	14	NA	NA	2134	-104	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAAGAGGAGGATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	71197921	71202686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_71198115_71198515_71198553_71198636_71198698_71199138_71199294_71199441_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
ENSMUSG00000031842.16_71197987_71202686_1	chr8	+	1665	12	NNC	ENSMUSG00000031842.16	novel	1959	14	NA	NA	2199	-104	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAAGAGGAGGATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	71197986	71202686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_71198115_71198592_71198698_71199138_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
ENSMUSG00000031842.16_71197987_71202790_1	chr8	+	1762	13	ISM	ENSMUSG00000031842.16	ENST00000262805.16	1937	14	2199	0	2199	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTTTGTCCAACAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	71197986	71202790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71198115_71198515_71198553_71198636_71198698_71199138_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
ENSMUSG00000031843.3_118518384_118525895_1	chr8	-	976	4	ISM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	2787	0	2787	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTTGAAGTAATTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	118525895	118518383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782
ENSMUSG00000031843.3_118518490_118528666_1	chr8	-	946	5	FSM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	16	106	16	-106	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGCCTTTGTCGTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	118528666	118518489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782_118525896_118528590
ENSMUSG00000031844.9_118428643_118480062_1	chr8	+	897	4	ISM	ENSMUSG00000031844.9	ENSMUST00000034304.9	1320	5	0	5704	0	-5526	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTATCCGAGCCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	118428642	118480062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_118429003_118461232_118461446_118469070_118469257_118479924
ENSMUSG00000031844.9_118428826_118485588_1	chr8	+	959	5	FSM	ENSMUSG00000031844.9	ENSMUST00000034304.9	1320	5	183	178	183	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGCCTACTGCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	118428825	118485588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_118429003_118461232_118461446_118469070_118469257_118479924_118480063_118485343
ENSMUSG00000031844.9_118428826_118485588_2	chr8	+	956	5	NNC	ENSMUSG00000031844.9	novel	1185	5	NA	NA	183	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1019	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGCCTACTGCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	118428825	118485588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_118428996_118461232_118461446_118469070_118469261_118479924_118480063_118485343
ENSMUSG00000031848.16_71126082_71131062_1	chr8	+	401	5	FSM	ENSMUSG00000031848.16	ENSMUST00000034311.15	925	5	184	340	0	-107	multi-exon	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGAGAAGAAGCCAGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	71126081	71131062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_71126108_71129204_71129247_71130427_71130527_71130603_71130785_71131009
ENSMUSG00000031848.16_71129204_71131169_1	chr8	+	483	4	ISM	ENSMUSG00000031848.16	ENSMUST00000034311.15	925	5	3306	233	3122	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCGTCTGGTCCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	71129203	71131169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71129247_71130427_71130527_71130603_71130785_71131009
ENSMUSG00000031848.16_71130603_71131402_1	chr8	+	575	2	ISM	ENSMUSG00000031848.16	ENSMUST00000210987.2	636	4	4521	-6	4521	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTTCTTCTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	71130602	71131402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71130785_71131009
ENSMUSG00000031853.6_126637614_126650891_1	chr8	+	694	2	ISM	ENSMUSG00000031853.6	ENSMUST00000034316.6	5693	10	425	23288	120	-23288	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCATCAGGTCCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	126637613	126650891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_126638173_126650756
ENSMUSG00000031853.6_126637741_126652962_1	chr8	+	762	3	ISM	ENSMUSG00000031853.6	ENSMUST00000034316.6	5693	10	552	21217	247	-21217	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTTCAGCCCTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	126637740	126652962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_126638173_126650756_126650938_126652813
ENSMUSG00000031853.6_126637998_126661684_1	chr8	+	698	5	ISM	ENSMUSG00000031853.6	ENSMUST00000034316.6	5693	10	809	12495	504	-12495	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGAGCTGAGCCGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	126637997	126661684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_126638173_126650756_126650938_126652813_126652963_126654269_126654446_126661667
ENSMUSG00000031853.6_126638096_126661796_1	chr8	+	712	5	ISM	ENSMUSG00000031853.6	ENSMUST00000034316.6	5693	10	907	12383	602	-12383	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTCATCTTCCAGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	126638095	126661796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_126638173_126650756_126650938_126652813_126652963_126654269_126654446_126661667
ENSMUSG00000031853.6_126650786_126663966_1	chr8	+	740	5	ISM	ENSMUSG00000031853.6	ENSMUST00000034316.6	5693	10	13597	10213	13292	-10213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTCCCCGACGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	126650785	126663966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_126650938_126652813_126652963_126654269_126654446_126661667_126661909_126663944
ENSMUSG00000031853.6_126650861_126664005_1	chr8	+	704	5	ISM	ENSMUSG00000031853.6	ENSMUST00000034316.6	5693	10	13672	10174	13367	-10174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGGACTGTGCAGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	126650860	126664005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_126650938_126652813_126652963_126654269_126654446_126661667_126661909_126663944
ENSMUSG00000031853.6_126650904_126664067_1	chr8	+	723	5	ISM	ENSMUSG00000031853.6	ENSMUST00000034316.6	5693	10	13715	10112	13410	-10112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTTCCAGCCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	126650903	126664067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_126650938_126652813_126652963_126654269_126654446_126661667_126661909_126663944
ENSMUSG00000031853.6_126652868_126665532_1	chr8	+	728	5	ISM	ENSMUSG00000031853.6	ENSMUST00000034316.6	5693	10	15679	8647	15374	-8647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTACGTGGGGACCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	126652867	126665532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_126652963_126654269_126654446_126661667_126661909_126663944_126664068_126665439
ENSMUSG00000031853.6_126654268_126666685_1	chr8	+	791	5	ISM	ENSMUSG00000031853.6	ENSMUST00000034316.6	5693	10	17079	7494	16774	-7494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTGTCTCAGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	126654267	126666685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_126654446_126661667_126661909_126663944_126664068_126665439_126665591_126666587
ENSMUSG00000031853.6_126654379_126668337_1	chr8	+	726	6	ISM	ENSMUSG00000031853.6	ENSMUST00000034316.6	5693	10	17190	5842	16885	-5842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACCAAAGCAAACGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	126654378	126668337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_126654446_126661667_126661909_126663944_126664068_126665439_126665591_126666587_126666686_126668291
ENSMUSG00000031853.6_126663984_126668653_1	chr8	+	695	4	ISM	ENSMUSG00000031853.6	ENSMUST00000034316.6	5693	10	26795	5526	26490	-5526	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTCCCAGTTCCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	126663983	126668653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_126664068_126665439_126665591_126666587_126666686_126668291
ENSMUSG00000031858.17_70471478_70479426_1	chr8	-	1624	10	ISM	ENSMUSG00000031858.17	ENSMUST00000050561.13	5369	19	15958	2705	15909	-261	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTCAGAGCTTTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	70479426	70471477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322
ENSMUSG00000031858.17_70471997_70483386_1	chr8	-	1622	15	ISM	ENSMUSG00000031858.17	ENSMUST00000050561.13	5369	19	11998	3224	11949	217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGCATCATCTGAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	70483386	70471996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291
ENSMUSG00000031862.12_70246450_70249778_1	chr8	+	506	5	ISM	ENSMUSG00000031862.12	ENSMUST00000034326.7	3915	26	2637	10621	2637	-10621	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGGACATCGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	70246449	70249778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731
ENSMUSG00000031862.12_70246689_70250422_1	chr8	+	554	6	ISM	ENSMUSG00000031862.12	ENSMUST00000034326.7	3915	26	2876	9977	2876	-9977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGGGGGCACCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	70246688	70250422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356
ENSMUSG00000031862.12_70249739_70251293_1	chr8	+	543	6	ISM	ENSMUSG00000031862.12	ENSMUST00000034326.7	3915	26	5926	9106	5926	-9106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTTGTACCCCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	70249738	70251293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233
ENSMUSG00000031862.12_70250389_70251555_1	chr8	+	513	5	ISM	ENSMUSG00000031862.12	ENSMUST00000034326.7	3915	26	6576	8844	6576	-8844	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCGAGGCGTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	70250388	70251555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461
ENSMUSG00000031862.12_70251329_70252587_1	chr8	+	498	4	ISM	ENSMUSG00000031862.12	ENSMUST00000034326.7	3915	26	7516	7812	7516	-7812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCAGCCCCAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	70251328	70252587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70251372_70251461_70251583_70251970_70252129_70252411
ENSMUSG00000031862.12_70253593_70257906_1	chr8	+	528	5	ISM	ENSMUSG00000031862.12	ENSMUST00000034326.7	3915	26	9780	2493	9780	-2493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGCGGCGACGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	70253592	70257906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869
ENSMUSG00000031864.17_69246608_69281595_1	chr8	+	3707	17	FSM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	27	467	0	-465	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCCAGTGTGCTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	69246607	69281595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ENSMUSG00000031864.17_69246666_69281656_1	chr8	+	3710	17	FSM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	85	406	0	-404	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACATAGTGTTGACACCT	NA	NA	NA	NA	NA	NA	NA	NA	69246665	69281656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ENSMUSG00000031864.17_69246666_69281727_1	chr8	+	3781	17	FSM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	85	335	0	-333	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCAGTGGTTTTAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	69246665	69281727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ENSMUSG00000031864.17_69249402_69281913_1	chr8	+	3731	15	ISM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	2821	149	2736	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGAGGTCAGTTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	69249401	69281913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ENSMUSG00000031864.17_69249453_69282062_1	chr8	+	3829	15	ISM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	2872	0	2787	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGGCCTAATGCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	69249452	69282062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ENSMUSG00000031865.17_83156824_83166564_1	chr6	+	651	6	ISM	ENSMUSG00000031865.17	ENST00000409567.7	4022	28	220	10229	220	-10229	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAAGCTGGAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	83156823	83166564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83156888_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529
ENSMUSG00000031865.17_83159509_83171426_1	chr6	+	2385	18	ISM	ENSMUSG00000031865.17	ENST00000409567.7	4022	28	2905	5367	2905	-5367	internal_fragment	TRUE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACTGCAGGAAGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	83159508	83171426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411
ENSMUSG00000031865.17_83159553_83171488_1	chr6	+	2403	18	ISM	ENSMUSG00000031865.17	ENST00000409567.7	4022	28	2949	5305	2949	-5305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCAGCTTATTGCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	83159552	83171488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411
ENSMUSG00000031865.17_83159700_83171698_1	chr6	+	2384	19	ISM	ENSMUSG00000031865.17	ENST00000409567.7	4022	28	3096	5095	3096	-5095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATGCACCATCCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	83159699	83171698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655
ENSMUSG00000031865.17_83166058_83172095_1	chr6	+	2434	17	ISM	ENSMUSG00000031865.17	ENSMUST00000113907.2	4205	26	3130	5004	3130	-4698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGAGGACTGGAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	83166057	83172095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969
ENSMUSG00000031865.17_83166190_83172620_1	chr6	+	2393	18	ISM	ENSMUSG00000031865.17	ENSMUST00000113907.2	4205	26	3262	4479	3262	-4173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCAGACACGGCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	83166189	83172620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529
ENSMUSG00000031865.17_83166571_83173050_1	chr6	+	2471	18	ISM	ENSMUSG00000031865.17	ENSMUST00000113907.2	4205	26	3643	4049	3643	-3743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAGGCATCGCTACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	83166570	83173050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922
ENSMUSG00000031865.17_83166634_83173050_1	chr6	+	2408	18	ISM	ENSMUSG00000031865.17	ENSMUST00000113907.2	4205	26	3706	4049	3706	-3743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAGGCATCGCTACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	83166633	83173050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922
ENSMUSG00000031865.17_83166881_83174606_1	chr6	+	2489	18	ISM	ENSMUSG00000031865.17	ENSMUST00000113907.2	4205	26	3953	2493	3953	-2187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCACTCATGGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	83166880	83174606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472
ENSMUSG00000031865.17_83167019_83174783_1	chr6	+	2397	19	ISM	ENSMUSG00000031865.17	ENSMUST00000113907.2	4205	26	4091	2316	4091	-2010	internal_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAAAGCTTTCCCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	83167018	83174783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737
ENSMUSG00000031865.17_83167717_83176679_1	chr6	+	2388	19	ISM	ENSMUSG00000031865.17	ENSMUST00000113907.2	4205	26	4789	420	4789	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTCTACATGGGCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	83167716	83176679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ENSMUSG00000031865.17_83167950_83176793_1	chr6	+	2440	18	ISM	ENSMUSG00000031865.17	ENSMUST00000113907.2	4205	26	5022	306	5022	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCCTTCCCTGCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	83167949	83176793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ENSMUSG00000031865.17_83168224_83176952_1	chr6	+	2409	17	ISM	ENSMUSG00000031865.17	ENSMUST00000113907.2	4205	26	5296	147	5296	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTCTTCCGTATTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	83168223	83176952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ENSMUSG00000031865.17_83168546_83177099_1	chr6	+	2438	16	ISM	ENSMUSG00000031865.17	ENSMUST00000113907.2	4205	26	5618	0	5618	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTGTGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	83168545	83177099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ENSMUSG00000031870.17_8901749_8903630_1	chr9	+	370	2	ISM	ENSMUSG00000031870.17	ENST00000263463.9	2475	7	1280	61509	1280	-61509	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTGATTCCTTACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	8901748	8903630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_8902085_8903596
ENSMUSG00000031870.17_8901891_8922632_1	chr9	+	379	3	ISM	ENSMUSG00000031870.17	ENST00000263463.9	2475	7	1422	42507	1422	-42507	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGCATTGTTGATAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	8901890	8922632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_8902085_8903596_8903749_8922599
ENSMUSG00000031870.17_8902019_8956295_1	chr9	+	386	4	ISM	ENSMUSG00000031870.17	ENST00000263463.9	2475	7	1550	8844	1550	-8844	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAGCCTGATGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	8902018	8956295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_8902085_8903596_8903749_8922599_8922717_8956244
ENSMUSG00000031870.17_8902057_8956366_1	chr9	+	419	4	ISM	ENSMUSG00000031870.17	ENST00000263463.9	2475	7	1588	8773	1588	-8773	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCTGATCTAATCCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	8902056	8956366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_8902085_8903596_8903749_8922599_8922717_8956244
ENSMUSG00000031870.17_8903628_8958346_1	chr9	+	399	4	ISM	ENSMUSG00000031870.17	ENST00000263463.9	2475	7	3159	6793	3159	-6793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCATTCTACTCGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	8903627	8958346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_8903749_8922599_8922717_8956244_8956390_8958330
ENSMUSG00000031870.17_8903685_8958391_1	chr9	+	387	4	ISM	ENSMUSG00000031870.17	ENST00000263463.9	2475	7	3216	6748	3216	-6748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGTCAAACTCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	8903684	8958391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_8903749_8922599_8922717_8956244_8956390_8958330
ENSMUSG00000031870.17_8922633_8961432_1	chr9	+	396	4	ISM	ENSMUSG00000031870.17	ENST00000263463.9	2475	7	22164	3707	22164	-3707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGATGAGATCAAGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	8922632	8961432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_8922717_8956244_8956390_8958330_8958462_8961396
ENSMUSG00000031878.19_105237666_105250989_1	chr8	-	1131	13	ISM	ENSMUSG00000031878.19	ENSMUST00000162466.8	1735	19	10279	6	10279	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAATATAGTCTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	105250989	105237665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966
ENSMUSG00000031878.19_105237876_105252953_1	chr8	-	1050	14	ISM	ENSMUSG00000031878.19	ENSMUST00000162466.8	1735	19	8315	216	8315	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATCACCAAACAATTC	NA	NA	NA	NA	NA	NA	NA	NA	105252953	105237875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911
ENSMUSG00000031878.19_105239973_105253794_1	chr8	-	1124	13	ISM	ENSMUSG00000031878.19	ENSMUST00000162466.8	1735	19	7474	2313	7474	-2313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTCTTTAGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	105253794	105239972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714
ENSMUSG00000031878.19_105242760_105254879_1	chr8	-	1143	14	ISM	ENSMUSG00000031878.19	ENSMUST00000034349.10	1808	20	6390	5100	6389	-5100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACAGCAGTTGATTTA	NA	NA	NA	NA	NA	NA	NA	NA	105254879	105242759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105254818
ENSMUSG00000031878.19_105243280_105256748_1	chr8	-	1080	14	ISM	ENSMUSG00000031878.19	ENSMUST00000034349.10	1808	20	4521	5620	4520	-5620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATAACAACCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	105256748	105243279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105254818_105254850_105256687
ENSMUSG00000031878.19_105244538_105257128_1	chr8	-	1098	14	ISM	ENSMUSG00000031878.19	ENSMUST00000034349.10	1808	20	4141	6878	4140	-6878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCCTTTTAATTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	105257128	105244537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105254818_105254850_105256687_105256749_105257024
ENSMUSG00000031878.19_105244819_105261240_1	chr8	-	1155	14	ISM	ENSMUSG00000031878.19	ENSMUST00000034349.10	1808	20	29	7159	28	-7159	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGGTGAACAGTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	105261240	105244818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ENSMUSG00000031879.15_105366473_105368597_3	chr8	-	912	5	NNC	ENSMUSG00000031879.15	novel	918	5	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCCTTAGCGTCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	105368597	105366472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_105366719_105367151_105367198_105367599_105367726_105367942_105368014_105368174
ENSMUSG00000031880.8_105354702_105357224_1	chr8	-	984	4	ISM	ENSMUSG00000031880.8	ENSMUST00000034351.8	1577	5	735	0	735	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGACTGTTGAGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	105357224	105354701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105355361_105356152_105356358_105356457_105356532_105357178
ENSMUSG00000031880.8_105355215_105357872_1	chr8	-	977	5	FSM	ENSMUSG00000031880.8	ENSMUST00000034351.8	1577	5	87	513	87	-513	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCACTCGGCGACGGGA	NA	NA	NA	NA	NA	NA	NA	NA	105357872	105355214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_105355361_105356152_105356358_105356457_105356532_105357178_105357613_105357754
ENSMUSG00000031881.7_105340774_105349722_1	chr8	-	2355	15	FSM	ENSMUSG00000031881.7	ENST00000568632.5	2408	15	54	-1	54	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAATGTCTAGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	105349722	105340773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_105341114_105341765_105341883_105342643_105342752_105342896_105343140_105343564_105343699_105344256_105344499_105344575_105344765_105344838_105344916_105344999_105345228_105345531_105345683_105345860_105345984_105346506_105346630_105348654_105348736_105348804_105348961_105349679
ENSMUSG00000031885.15_105897376_105942957_1	chr8	+	1180	6	FSM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	55	1656	0	-1656	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTTTCAGACGAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	105897375	105942957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
ENSMUSG00000031885.15_105897577_105943139_1	chr8	+	1161	6	FSM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	256	1474	0	-1474	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAACGTTTACAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	105897576	105943139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
ENSMUSG00000031885.15_105905263_105943391_1	chr8	+	1179	4	ISM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	7942	1222	7686	-1222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGAACTTGTTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	105905262	105943391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_105905342_105921106_105921224_105929083_105929211_105942535
ENSMUSG00000031887.14_105986517_105987272_1	chr8	-	222	2	ISM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	3969	1599	3969	-1599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTCCAAGCCTACCGCG	NA	NA	NA	NA	NA	NA	NA	NA	105987272	105986516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105986620_105987153
ENSMUSG00000031889.10_105966608_105973142_1	chr8	+	398	4	ISM	ENSMUSG00000031889.10	ENSMUST00000034361.10	2916	16	14831	6543	14831	-6543	internal_fragment	TRUE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGCTCTCCACACAAA	NA	NA	NA	NA	NA	NA	NA	NA	105966607	105973142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_105966705_105967472_105967571_105967658_105967772_105973052
ENSMUSG00000031893.8_106563832_106568846_1	chr8	+	1160	9	ISM	ENSMUSG00000031893.8	ENST00000388833.7	1736	13	48	1991	48	-1991	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTTAAGGATGCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	106563831	106568846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106563891_106564037_106564165_106565338_106565433_106566622_106566820_106567189_106567326_106568025_106568196_106568277_106568450_106568522_106568645_106568763
ENSMUSG00000031893.8_106563846_106568862_1	chr8	+	1159	9	NNC	ENSMUSG00000031893.8	novel	1736	13	NA	NA	62	-1975	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGGAACGCATTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	106563845	106568862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106563891_106564037_106564165_106565338_106565433_106566622_106566820_106567189_106567326_106568025_106568196_106568277_106568450_106568525_106568645_106568763
ENSMUSG00000031893.8_106563872_106569063_1	chr8	+	1198	10	ISM	ENSMUSG00000031893.8	ENST00000388833.7	1736	13	88	1774	88	-1774	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCGTCGCTTTGGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	106563871	106569063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106563891_106564037_106564165_106565338_106565433_106566622_106566820_106567189_106567326_106568025_106568196_106568277_106568450_106568522_106568645_106568763_106568890_106569028
ENSMUSG00000031893.8_106564079_106569100_1	chr8	+	1175	9	ISM	ENSMUSG00000031893.8	ENST00000388833.7	1736	13	295	1737	295	-1737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTACACCATTTTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	106564078	106569100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106564165_106565338_106565433_106566622_106566820_106567189_106567326_106568025_106568196_106568277_106568450_106568522_106568645_106568763_106568890_106569028
ENSMUSG00000031893.8_106565336_106569414_1	chr8	+	1283	9	ISM	ENSMUSG00000031893.8	ENST00000388833.7	1736	13	1552	1423	1552	-1423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	923	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGACTATCTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	106565335	106569414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106565433_106566622_106566820_106567189_106567326_106568025_106568196_106568277_106568450_106568522_106568645_106568763_106568890_106569028_106569182_106569304
ENSMUSG00000031893.8_106566697_106570558_1	chr8	+	1145	9	NNC	ENSMUSG00000031893.8	novel	1736	13	NA	NA	2913	-279	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAGATTCAGGAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	106566696	106570558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106566820_106567189_106567326_106568025_106568196_106568277_106568450_106568525_106568645_106568763_106568890_106569028_106569182_106569304_106569415_106570522
ENSMUSG00000031893.8_106566699_106570593_1	chr8	+	1181	9	ISM	ENSMUSG00000031893.8	ENST00000388833.7	1736	13	2915	244	2915	-244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTCCAGACAGCAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	106566698	106570593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106566820_106567189_106567326_106568025_106568196_106568277_106568450_106568522_106568645_106568763_106568890_106569028_106569182_106569304_106569415_106570522
ENSMUSG00000031893.8_106566717_106570646_1	chr8	+	1213	9	NNC	ENSMUSG00000031893.8	novel	1736	13	NA	NA	2933	-191	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTAGACAGGGACACCTA	NA	NA	NA	NA	NA	NA	NA	NA	106566716	106570646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106566820_106567189_106567326_106568025_106568196_106568277_106568450_106568525_106568645_106568763_106568890_106569028_106569182_106569304_106569415_106570522
ENSMUSG00000031893.8_106566740_106570780_1	chr8	+	1234	10	ISM	ENSMUSG00000031893.8	ENST00000388833.7	1736	13	2956	57	2956	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAACAGTATGAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	106566739	106570780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106566820_106567189_106567326_106568025_106568196_106568277_106568450_106568522_106568645_106568763_106568890_106569028_106569182_106569304_106569415_106570522_106570650_106570742
ENSMUSG00000031893.8_106567188_106570838_1	chr8	+	1211	9	NNC	ENSMUSG00000031893.8	novel	1736	13	NA	NA	3404	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGGATCCGTGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	106567187	106570838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106567326_106568025_106568196_106568277_106568450_106568522_106568645_106568763_106568890_106569031_106569182_106569304_106569415_106570522_106570650_106570742
ENSMUSG00000031893.8_106567188_106570838_2	chr8	+	1214	9	ISM	ENSMUSG00000031893.8	ENST00000388833.7	1736	13	3404	-1	3404	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGGATCCGTGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	106567187	106570838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106567326_106568025_106568196_106568277_106568450_106568522_106568645_106568763_106568890_106569028_106569182_106569304_106569415_106570522_106570650_106570742
ENSMUSG00000031897.10_106662376_106664948_1	chr8	-	1178	8	FSM	ENSMUSG00000031897.10	ENSMUST00000034369.10	1311	8	128	5	128	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAACACTTAAACAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	106664948	106662375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663497_106663614_106663872_106664014_106664125_106664224_106664310_106664399_106664586
ENSMUSG00000031901.13_106758329_106771459_1	chr8	+	321	6	ISM	ENSMUSG00000031901.13	ENSMUST00000034375.11	1860	16	20190	8992	20190	-8992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTGTGAAGTTATAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	106758328	106771459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106758374_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429
ENSMUSG00000031901.13_106771428_106775377_1	chr8	+	351	3	ISM	ENSMUSG00000031901.13	ENSMUST00000034375.11	1860	16	33289	5074	33289	-5074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCCAGTCTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	106771427	106775377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106771517_106772532_106772702_106775284
ENSMUSG00000031901.13_106772564_106777038_1	chr8	+	350	3	ISM	ENSMUSG00000031901.13	ENSMUST00000034375.11	1860	16	34425	3413	34425	-3413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAGGAGCCAGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	106772563	106777038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106772702_106775284_106775407_106776948
ENSMUSG00000031901.13_106775340_106779711_1	chr8	+	379	4	ISM	ENSMUSG00000031901.13	ENSMUST00000034375.11	1860	16	37201	740	37201	-740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCTCATCAGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	106775339	106779711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106775407_106776948_106777099_106778433_106778522_106779637
ENSMUSG00000031902.11_106805383_106854762_1	chr8	+	3130	9	ISM	ENSMUSG00000031902.11	ENST00000349223.9	5982	10	19056	2406	19056	88	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTGTGGGAAAAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	106805382	106854762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854488
ENSMUSG00000031902.11_106805915_106855253_1	chr8	+	3089	9	ISM	ENSMUSG00000031902.11	ENST00000349223.9	5982	10	19588	1915	19588	178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCATTGAAGTGTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	106805914	106855253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854488
ENSMUSG00000031902.11_106806042_106855387_1	chr8	+	3096	9	ISM	ENSMUSG00000031902.11	ENST00000349223.9	5982	10	19715	1781	19715	312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGGTGAATTTCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	106806041	106855387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854488
ENSMUSG00000031902.11_106810489_106855751_1	chr8	+	3082	8	ISM	ENSMUSG00000031902.11	ENST00000349223.9	5982	10	24162	1417	24162	676	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGACATGGTGGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	106810488	106855751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854488
ENSMUSG00000031902.11_106822897_106856155_1	chr8	+	3068	6	ISM	ENSMUSG00000031902.11	ENST00000349223.9	5982	10	36570	1013	36570	-1013	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATGATGCTAGTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	106822896	106856155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854488
ENSMUSG00000031902.11_106825774_106856317_1	chr8	+	3088	5	ISM	ENSMUSG00000031902.11	ENST00000349223.9	5982	10	39447	851	39447	-851	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCATTGGCCTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	106825773	106856317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854488
ENSMUSG00000031902.11_106830695_106856479_1	chr8	+	3085	3	ISM	ENSMUSG00000031902.11	ENST00000349223.9	5982	10	44368	689	44368	-689	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAATTTTGATGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106830694	106856479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106830784_106834756_106835762_106854488
ENSMUSG00000031902.11_106835011_106856810_1	chr8	+	3073	2	ISM	ENSMUSG00000031902.11	ENST00000349223.9	5982	10	48684	358	48684	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTTACTAGAAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	106835010	106856810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106835762_106854488
ENSMUSG00000031902.11_106835264_106857065_1	chr8	+	3075	2	ISM	ENSMUSG00000031902.11	ENST00000349223.9	5982	10	48937	103	48937	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAGGAGTGCAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	106835263	106857065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106835762_106854488
ENSMUSG00000031902.11_106835350_106857169_1	chr8	+	3093	2	ISM	ENSMUSG00000031902.11	ENST00000349223.9	5982	10	49023	-1	49023	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAAATCTGAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106835349	106857169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106835762_106854488
ENSMUSG00000031903.8_106886844_106890039_1	chr8	+	977	4	ISM	ENSMUSG00000031903.8	ENSMUST00000034377.8	2706	6	9813	1308	9813	-1305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACAAGCTTGGCAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	106886843	106890039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106886914_106887212_106887312_106887715_106887941_106889456
ENSMUSG00000031903.8_106887813_106890300_1	chr8	+	972	2	ISM	ENSMUSG00000031903.8	ENSMUST00000212963.2	2578	6	10782	1044	10782	-1044	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCACTGGGCCCTAACC	NA	NA	NA	NA	NA	NA	NA	NA	106887812	106890300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106887941_106889456
ENSMUSG00000031913.10_107757854_107769763_1	chr8	+	1320	9	ISM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	0	2624	0	-2624	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGCGGCAGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	107757853	107769763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543
ENSMUSG00000031913.10_107758034_107771154_1	chr8	+	1208	10	ISM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	180	1233	180	-1233	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCCAGGGGCCATAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	107758033	107771154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086
ENSMUSG00000031913.10_107763274_107771778_1	chr8	+	1294	10	ISM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	5420	609	5420	-609	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTGATAATGAAATTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	107763273	107771778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
ENSMUSG00000031913.10_107763365_107771794_1	chr8	+	1219	10	ISM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	5511	593	5511	-593	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTCTGACTGGAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	107763364	107771794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
ENSMUSG00000031913.10_107765763_107772044_1	chr8	+	1202	7	ISM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	7909	343	7909	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCTTTGATTTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	107765762	107772044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
ENSMUSG00000031913.10_107767545_107772200_1	chr8	+	1240	6	ISM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	9691	187	9691	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAAGCTTGCATCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	107767544	107772200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
ENSMUSG00000031913.10_107767603_107772243_1	chr8	+	1225	6	ISM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	9749	144	9749	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGCTTCTGTGAACACG	NA	NA	NA	NA	NA	NA	NA	NA	107767602	107772243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
ENSMUSG00000031913.10_107768887_107772387_1	chr8	+	1246	5	ISM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	11033	0	11033	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTGGAGTCGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	107768886	107772387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
ENSMUSG00000031916.18_107775095_107776826_1	chr8	-	721	2	ISM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	6490	2168	6490	-2168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGCCGCAGCCGCCATAC	NA	NA	NA	NA	NA	NA	NA	NA	107776826	107775094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_107775763_107776773
ENSMUSG00000031916.18_107775168_107776856_1	chr8	-	678	2	ISM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	6460	2241	6460	-2241	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTTGGCCGCCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	107776856	107775167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_107775763_107776773
ENSMUSG00000031916.18_107775350_107778940_1	chr8	-	678	3	ISM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	4376	2423	4376	-2423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGTCGCCACTCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	107778940	107775349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_107775763_107776773_107776943_107778844
ENSMUSG00000031916.18_107775559_107779135_1	chr8	-	664	3	ISM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	4181	2632	4181	-2632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGGGAGCCGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	107779135	107775558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_107775763_107776773_107776943_107778844
ENSMUSG00000031916.18_107775619_107779201_1	chr8	-	670	3	ISM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	4115	2692	4115	-2692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGCTCCAGAGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	107779201	107775618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_107775763_107776773_107776943_107778844
ENSMUSG00000031916.18_107776864_107779432_1	chr8	-	667	2	ISM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	3884	3937	3884	-3937	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCACTGCCTTCCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	107779432	107776863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_107776943_107778844
ENSMUSG00000031916.18_107779099_107780756_1	chr8	-	677	2	ISM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	2560	6172	2560	-6172	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGAAATTCCAGGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	107780756	107779098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_107779673_107780653
ENSMUSG00000031916.18_107779173_107780889_1	chr8	-	736	2	ISM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	2427	6246	2427	-6246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGCGGCCAGTTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	107780889	107779172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_107779673_107780653
ENSMUSG00000031916.18_107779540_107783130_1	chr8	-	579	3	ISM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	186	6613	186	-6613	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGTTGAGGGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	107783130	107779539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_107779673_107780653_107780862_107782892
ENSMUSG00000031917.13_107783538_107786602_1	chr8	+	2046	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	29	961	5	-961	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACTTCAGTCCTCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	107783537	107786602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
ENSMUSG00000031917.13_107783996_107786785_1	chr8	+	1966	3	ISM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	487	778	463	-778	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGATTAAATGGGTATACT	NA	NA	NA	NA	NA	NA	NA	NA	107783995	107786785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_107784044_107784678_107784820_107785008
ENSMUSG00000031918.17_13659896_13716963_1	chr9	+	2784	15	FSM	ENSMUSG00000031918.17	ENSMUST00000034396.14	3788	15	190	814	190	133	multi-exon	FALSE	canonical	NA	NA	NA	NA	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAGTTTAGAAACATAGC	NA	NA	NA	NA	NA	NA	NA	NA	13659895	13716963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031918.17_13660481_13717097_1	chr9	+	2472	16	FSM	ENSMUSG00000031918.17	ENST00000675362.1	2485	16	13	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATTTAAAAATGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	13660480	13717097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_13660697_13671692_13671785_13693572_13693683_13697104_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031918.17_13660481_13717473_1	chr9	+	2709	15	FSM	ENSMUSG00000031918.17	ENSMUST00000034396.14	3788	15	775	304	4	-304	multi-exon	FALSE	canonical	NA	NA	NA	NA	1722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTACTCTACTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	13660480	13717473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031918.17_13660615_13710631_1	chr9	+	1385	11	ISM	ENSMUSG00000031918.17	ENST00000481642.6	2283	16	147	6199	0	-6199	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTATTTACTACTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	13660614	13710631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_13660697_13671713_13671785_13693572_13693812_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445
ENSMUSG00000031918.17_13677124_13717097_1	chr9	+	2310	15	NNC	ENSMUSG00000031918.17	novel	2315	15	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1732	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATTTAAAAATGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	13677123	13717097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_13677318_13693573_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031918.17_13677124_13717097_2	chr9	+	2309	15	NNC	ENSMUSG00000031918.17	novel	2315	15	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATTTAAAAATGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	13677123	13717097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_13677318_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716672
ENSMUSG00000031918.17_13677124_13717097_3	chr9	+	2311	15	FSM	ENSMUSG00000031918.17	ENST00000675636.1	2315	15	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATTTAAAAATGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	13677123	13717097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_13677318_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031918.17_13677124_13717097_4	chr9	+	2310	15	NNC	ENSMUSG00000031918.17	novel	2315	15	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATTTAAAAATGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	13677123	13717097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_13677318_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714721_13714835_13716101_13716279_13716670
ENSMUSG00000031918.17_13677124_13717097_5	chr9	+	2310	15	NNC	ENSMUSG00000031918.17	novel	2315	15	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATTTAAAAATGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	13677123	13717097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_13677318_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716102_13716279_13716670
ENSMUSG00000031918.17_13677124_13717097_6	chr9	+	2305	15	NNC	ENSMUSG00000031918.17	novel	2315	15	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATTTAAAAATGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	13677123	13717097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_13677318_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710451_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031918.17_13677124_13717097_7	chr9	+	2309	15	NNC	ENSMUSG00000031918.17	novel	2315	15	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATTTAAAAATGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	13677123	13717097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_13677318_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713212_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031918.17_13677124_13717097_8	chr9	+	2310	15	NNC	ENSMUSG00000031918.17	novel	2315	15	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATTTAAAAATGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	13677123	13717097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_13677318_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704445_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031918.17_13677157_13711197_1	chr9	+	1333	11	ISM	ENSMUSG00000031918.17	ENST00000674528.1	2362	15	37	5900	37	-5633	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGACAAGGTCGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	13677156	13711197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_13677318_13693572_13693683_13697104_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171
ENSMUSG00000031918.17_13677177_13711282_1	chr9	+	1398	11	ISM	ENSMUSG00000031918.17	ENST00000674528.1	2362	15	57	5815	57	-5548	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCTCATGTTGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	13677176	13711282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_13677318_13693572_13693683_13697104_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171
ENSMUSG00000031918.17_13677237_13711328_1	chr9	+	1384	11	ISM	ENSMUSG00000031918.17	ENST00000674528.1	2362	15	117	5769	117	-5502	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCCTTGTGGAGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	13677236	13711328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_13677318_13693572_13693683_13697104_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171
ENSMUSG00000031918.17_13693573_13717777_1	chr9	+	2797	14	ISM	ENSMUSG00000031918.17	ENST00000675636.1	2315	15	16453	-680	-6762	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCCACAGTTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	13693572	13717777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031922.13_13720043_13724816_1	chr9	-	664	5	ISM	ENSMUSG00000031922.13	ENSMUST00000124883.8	1643	9	5166	563	5166	-563	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCCAAGGACCGCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	13724816	13720042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705
ENSMUSG00000031922.13_13723929_13730334_1	chr9	-	686	6	ISM	ENSMUSG00000031922.13	ENSMUST00000148086.8	2467	11	8014	4838	-352	-4449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTGTAGCTATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	13730334	13723928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154
ENSMUSG00000031924.5_107877414_107910670_1	chr8	+	682	3	FSM	ENSMUSG00000031924.5	ENST00000515314.6	819	3	70	67	70	-67	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCAGGTTATGAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	107877413	107910670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_107877506_107896442_107896572_107910209
ENSMUSG00000031924.5_107877473_107910716_1	chr8	+	669	3	FSM	ENSMUSG00000031924.5	ENST00000515314.6	819	3	129	21	129	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTTAATTCTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	107877472	107910716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_107877506_107896442_107896572_107910209
ENSMUSG00000031924.5_107896505_107910270_1	chr8	+	187	4	ISM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	19233	3833	19161	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCTGGGCTGACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	107896504	107910270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_107896572_107897022_107897053_107906045_107906075_107910209
ENSMUSG00000031925.18_13531696_13613622_1	chr9	+	1563	3	ISM	ENSMUSG00002075655.1_ENSMUSG00000031925.18	ENSMUST00000034401.15	2098	4	-1246	5017	-826	-5017	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTGCAGCCAGCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	13531695	13613622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_13532972_13608469_13608674_13613539
ENSMUSG00000031925.18_13531986_13617122_1	chr9	+	1537	4	FSM	ENSMUSG00002075655.1_ENSMUSG00000031925.18	ENSMUST00000034401.15	2098	4	-956	1517	-536	-1517	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGATAACAAATCAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	13531985	13617122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_13532972_13608469_13608674_13613539_13613652_13616887
ENSMUSG00000031927.10_14669487_14678167_1	chr9	-	406	3	ISM	ENSMUSG00000031927.10	ENSMUST00000060330.5	688	4	4159	0	4142	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGTTCTTCTGTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	14678167	14669486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_14669752_14672900_14673027_14678152
ENSMUSG00000031927.10_14669627_14682178_1	chr9	-	383	4	FSM	ENSMUSG00000031927.10	ENSMUST00000191047.7	654	4	131	140	131	-140	multi-exon	TRUE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATATGTACGTCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	14682178	14669626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_14669752_14672917_14673027_14678152_14678258_14682134
ENSMUSG00000031927.10_14669712_14682167_1	chr9	-	304	4	FSM	ENSMUSG00000031927.10	ENSMUST00000060330.5	688	4	159	225	142	-225	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACCTAAAGTCTAAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	14682167	14669711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_14669752_14672900_14673027_14678152_14678258_14682134
ENSMUSG00000031928.16_14695998_14736515_1	chr9	+	1779	15	ISM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	48	9427	26	-9427	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATCGGAGCAGACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	14695997	14736515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436
ENSMUSG00000031928.16_14698174_14737911_1	chr9	+	1844	14	ISM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	2224	8031	2202	-8031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACAGAGCTGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	14698173	14737911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830
ENSMUSG00000031928.16_14707078_14744990_1	chr9	+	1827	16	ISM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	11128	952	11106	-952	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGGAAGAAATCAAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	14707077	14744990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ENSMUSG00000031928.16_14710876_14745200_1	chr9	+	1794	14	ISM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	14926	742	14904	-742	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTCTGCTTGTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	14710875	14745200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ENSMUSG00000031928.16_14714152_14745421_1	chr9	+	1832	13	ISM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	18202	521	18180	-521	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTGTTATCAAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	14714151	14745421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ENSMUSG00000031928.16_14721125_14745669_1	chr9	+	1789	11	ISM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	25175	273	25153	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAATAGAATTTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	14721124	14745669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ENSMUSG00000031928.16_14726498_14745942_1	chr9	+	1845	9	ISM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	30548	0	30526	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAATAATCTCATTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	14726497	14745942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ENSMUSG00000031930.12_108179621_108210052_1	chr8	+	434	4	ISM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	16624	75175	16589	-73792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACTGTTGATCTGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	108179620	108210052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_108179696_108184074_108184223_108184511_108184634_108209963
ENSMUSG00000031930.12_108244670_108275175_1	chr8	+	469	5	ISM	ENSMUSG00000031930.12	ENSMUST00000212205.2	2758	23	81638	8669	-26974	-8669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGGGTGAGGACTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	108244669	108275175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100
ENSMUSG00000031930.12_108271644_108281106_1	chr8	+	1174	10	ISM	ENSMUSG00000031930.12	ENSMUST00000212543.2	1996	15	0	2739	0	-2738	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGACATGGAGATTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	108271643	108281106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_108271979_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064
ENSMUSG00000031930.12_108271788_108281157_1	chr8	+	1081	10	ISM	ENSMUSG00000031930.12	ENSMUST00000212543.2	1996	15	144	2688	144	-2687	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTGAGAACATCCGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	108271787	108281157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_108271979_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064
ENSMUSG00000031930.12_108271900_108281650_1	chr8	+	1055	11	ISM	ENSMUSG00000031930.12	ENSMUST00000212543.2	1996	15	256	2195	256	-2194	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGACCAAAGCTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	108271899	108281650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_108271979_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612
ENSMUSG00000031930.12_108271940_108281724_1	chr8	+	1089	11	ISM	ENSMUSG00000031930.12	ENSMUST00000212543.2	1996	15	296	2121	296	-2120	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGAGGTGGGTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	108271939	108281724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_108271979_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612
ENSMUSG00000031930.12_108275100_108282150_1	chr8	+	1110	10	ISM	ENSMUSG00000031930.12	ENSMUST00000212543.2	1996	15	3456	1695	3456	-1694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTCTGGGGTCCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	108275099	108282150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045
ENSMUSG00000031930.12_108276416_108283677_1	chr8	+	1148	10	ISM	ENSMUSG00000031930.12	ENSMUST00000212543.2	1996	15	4772	168	4772	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCGGTTGCACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	108276415	108283677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ENSMUSG00000031930.12_108278906_108283845_1	chr8	+	1161	8	ISM	ENSMUSG00000031930.12	ENSMUST00000212543.2	1996	15	7262	0	7262	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTGTTGCAAAGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	108278905	108283845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ENSMUSG00000031931.5_14691948_14694095_1	chr9	-	1145	2	FSM	ENSMUSG00000031931.5	ENSMUST00000034406.4	1753	2	165	443	165	337	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTTTTGAAGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	14694095	14691947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_14692908_14693910
ENSMUSG00000031931.5_14691999_14694159_1	chr9	-	1158	2	FSM	ENSMUSG00000031931.5	ENSMUST00000034406.4	1753	2	101	494	101	286	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTCTTAACATCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	14694159	14691998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_14692908_14693910
ENSMUSG00000031931.5_14692069_14694260_1	chr9	-	1189	2	FSM	ENSMUSG00000031931.5	ENSMUST00000034406.4	1753	2	0	564	0	216	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGCAGTTTAGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	14694260	14692068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_14692908_14693910
ENSMUSG00000031931.5_14692285_14696027_1	chr9	-	1183	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216372.2	2679	3	125	1371	125	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGTATTTGGGTACATC	NA	NA	NA	NA	NA	NA	NA	NA	14696027	14692284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_14692908_14693910_14694259_14695815
ENSMUSG00000031934.15_14916617_14918947_1	chr9	-	1188	2	ISM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	37827	3193	37827	-3193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAAGAGAACACAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	14918947	14916616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_14917514_14918656
ENSMUSG00000031934.15_14916913_14919220_1	chr9	-	1165	2	ISM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	37554	3489	37554	-3489	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCCCACTGCTCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	14919220	14916912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_14917514_14918656
ENSMUSG00000031934.15_14917081_14921409_1	chr9	-	1170	3	ISM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	35365	3657	35365	-3657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACCCTCTGTGCCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	14921409	14917080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_14917514_14918656_14919316_14921331
ENSMUSG00000031934.15_14917323_14932745_1	chr9	-	1139	4	ISM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	24029	3899	24029	-3899	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATCTCTAATAGACATAA	NA	NA	NA	NA	NA	NA	NA	NA	14932745	14917322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_14917514_14918656_14919316_14921331_14921553_14932677
ENSMUSG00000031934.15_14917456_14956228_1	chr9	-	1154	5	FSM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	546	4032	546	-4032	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGAATCCGTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	14956228	14917455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_14917514_14918656_14919316_14921331_14921553_14932677_14932818_14956152
ENSMUSG00000031934.15_14919075_14956774_1	chr9	-	1224	4	ISM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	0	5651	0	-5651	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTGCAAGCTCATCGC	NA	NA	NA	NA	NA	NA	NA	NA	14956774	14919074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_14919316_14921331_14921553_14932677_14932818_14956152
ENSMUSG00000031935.10_15171647_15185665_1	chr9	-	3058	8	ISM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	5562	0	5434	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGGGCATAGTGGCATA	NA	NA	NA	NA	NA	NA	NA	NA	15185665	15171646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580
ENSMUSG00000031935.10_15171848_15185786_1	chr9	-	2899	9	ISM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	5441	201	5313	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTTTCTCCCTGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	15185786	15171847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744
ENSMUSG00000031935.10_15171998_15187220_1	chr9	-	2923	10	ISM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	4007	351	3879	-351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCCTGAAGGTCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	15187220	15171997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141
ENSMUSG00000031935.10_15172067_15187275_1	chr9	-	2909	10	ISM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	3952	420	3824	-420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATACATGACAGCTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	15187275	15172066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141
ENSMUSG00000031935.10_15172172_15188900_1	chr9	-	2938	11	ISM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	2327	525	2199	-525	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACCGCTCTTCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	15188900	15172171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852
ENSMUSG00000031935.10_15172242_15188939_1	chr9	-	2907	11	ISM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	2288	595	2160	-595	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCCAGCTGCCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	15188939	15172241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852
ENSMUSG00000031935.10_15172285_15189019_1	chr9	-	2944	11	ISM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	2208	638	2080	-638	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTAGTTTTGTAATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	15189019	15172284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852
ENSMUSG00000031935.10_15172516_15191036_1	chr9	-	2904	12	FSM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	191	869	63	670	multi-exon	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTATAATGGAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	15191036	15172515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
ENSMUSG00000031935.10_15172571_15191199_1	chr9	-	3012	12	FSM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	28	924	28	615	multi-exon	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGAAGCATGAAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	15191199	15172570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
ENSMUSG00000031935.10_15172647_15191199_1	chr9	-	2936	12	FSM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	28	1000	28	539	multi-exon	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGCATTGTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	15191199	15172646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
ENSMUSG00000031938.16_15196106_15209228_1	chr9	-	715	6	FSM	ENSMUSG00000031938.16	ENST00000617482.4	726	6	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGGTTAGCTAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	15209228	15196105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_15196288_15198651_15198769_15201962_15202113_15205727_15205830_15205981_15206056_15209138
ENSMUSG00000031938.16_15196106_15209228_2	chr9	-	714	6	NNC	ENSMUSG00000031938.16	novel	726	6	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGGTTAGCTAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	15209228	15196105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_15196288_15198651_15198769_15201962_15202113_15205727_15205830_15205982_15206056_15209138
ENSMUSG00000031938.16_15196132_15203394_1	chr9	-	372	3	ISM	ENSMUSG00000031938.16	ENST00000528288.5	753	6	5845	26	5845	-26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTTGGGAGAGATTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	15203394	15196131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_15196288_15198651_15198769_15203295
ENSMUSG00000031938.16_15196208_15205781_1	chr9	-	428	4	ISM	ENSMUSG00000031938.16	ENST00000528288.5	753	6	3458	102	3458	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACAGTGGAGTACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	15205781	15196207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_15196288_15198651_15198769_15203295_15203473_15205727
ENSMUSG00000031938.16_15198702_15206023_1	chr9	-	388	4	ISM	ENSMUSG00000031938.16	ENST00000528288.5	753	6	3216	2596	3216	-2596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAAGGCTCCCTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	15206023	15198701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_15198769_15203295_15203473_15205727_15205830_15205981
ENSMUSG00000031938.16_15198702_15206057_1	chr9	-	421	4	NNC	ENSMUSG00000031938.16	novel	753	6	NA	NA	3182	-2596	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAAGGCTCCCTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	15206057	15198701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_15198769_15203295_15203473_15205727_15205830_15205982
ENSMUSG00000031938.16_15203296_15209228_1	chr9	-	443	4	ISM	ENSMUSG00000031938.16	ENST00000528288.5	753	6	11	7190	11	4401	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTTTGCTCATAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	15209228	15203295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_15203473_15205727_15205830_15205981_15206056_15209138
ENSMUSG00000031939.17_15219819_15223094_1	chr9	+	893	4	ISM	ENSMUSG00000031939.17	ENSMUST00000164079.9	1005	6	2259	0	2259	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTGCTTGATTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	15219818	15223094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_15220212_15221154_15221331_15221653_15221706_15222822
ENSMUSG00000031939.17_15219853_15223094_1	chr9	+	859	4	ISM	ENSMUSG00000031939.17	ENSMUST00000164079.9	1005	6	2293	0	2293	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTGCTTGATTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	15219852	15223094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_15220212_15221154_15221331_15221653_15221706_15222822
ENSMUSG00000031948.15_112720075_112729928_1	chr8	-	1593	12	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	7970	0	7970	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112729928	112720074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906
ENSMUSG00000031948.15_112720075_112729984_1	chr8	-	1649	12	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	7914	0	7914	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112729984	112720074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906
ENSMUSG00000031948.15_112720223_112732299_1	chr8	-	1625	13	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	5599	148	5599	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTGCATCTCAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	112732299	112720222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263
ENSMUSG00000031948.15_112720278_112732347_1	chr8	-	1618	13	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	5551	203	5551	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCCAGAGAGCACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	112732347	112720277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263
ENSMUSG00000031948.15_112720318_112732420_1	chr8	-	1651	13	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	5478	243	5478	-243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAGCCAGAGGACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	112732420	112720317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263
ENSMUSG00000031948.15_112721507_112725180_1	chr8	-	459	5	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	12718	1432	12718	-1432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATATCAAGGTATGTACG	NA	NA	NA	NA	NA	NA	NA	NA	112725180	112721506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153
ENSMUSG00000031948.15_112721532_112734857_1	chr8	-	1613	13	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	3041	1457	3041	-1457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCATGTTTCTCACCGA	NA	NA	NA	NA	NA	NA	NA	NA	112734857	112721531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838
ENSMUSG00000031948.15_112721587_112734914_1	chr8	-	1615	13	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	2984	1512	2984	-1512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTGGAATACGGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	112734914	112721586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838
ENSMUSG00000031948.15_112723151_112737898_1	chr8	-	1664	13	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	0	3076	0	-3076	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATACTGAGCTGAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	112737898	112723150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112737841
ENSMUSG00000031948.15_112728458_112732368_1	chr8	-	427	4	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	5530	8383	5530	-8383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTTGAGGGCAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	112732368	112728457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112728520_112729142_112729237_112729906_112730073_112732263
ENSMUSG00000031948.15_112729142_112737898_1	chr8	-	475	4	ISM	ENSMUSG00000031948.15	ENSMUST00000034426.14	2008	14	57	9067	0	-9067	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACACAGAAATACACAATTA	NA	NA	NA	NA	NA	NA	NA	NA	112737898	112729141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112729237_112729906_112730073_112732263_112732421_112737841
ENSMUSG00000031950.8_112667390_112679547_1	chr8	+	925	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	55	697	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTGTGACCATGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	112667389	112679547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
ENSMUSG00000031950.8_112669154_112679729_1	chr8	+	936	2	ISM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	1819	515	1789	182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAAAAGGTGTATACTGC	NA	NA	NA	NA	NA	NA	NA	NA	112669153	112679729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_112669307_112678946
ENSMUSG00000031951.9_112638850_112641203_1	chr8	-	1976	2	NNC	ENSMUSG00000031951.9	novel	2984	7	NA	NA	19310	-207	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCGGGGACACTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	112641203	112638849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_112640738_112641115
ENSMUSG00000031953.3_112589670_112603179_1	chr8	-	3675	3	FSM	ENSMUSG00000031953.3	ENSMUST00000034431.3	3878	3	203	0	203	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGCGTTGGGAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	112603179	112589669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_112593129_112596219_112596391_112603134
ENSMUSG00000031953.3_112589774_112603241_1	chr8	-	3633	3	FSM	ENSMUSG00000031953.3	ENSMUST00000034431.3	3878	3	141	104	141	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATCAAATCTTTGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	112603241	112589773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_112593129_112596219_112596391_112603134
ENSMUSG00000031953.3_112592997_112596376_2	chr8	-	220	2	FSM	ENSMUSG00000031953.3	ENST00000566980.1	235	2	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGCCCTTTCACTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	112596376	112592996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_112593129_112596288
ENSMUSG00000031954.7_112495123_112580923_1	chr8	-	1173	7	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	112580923	112495122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_112495420_112505882_112506042_112557501_112557622_112566994_112567118_112568414_112568623_112571725_112571844_112580775
ENSMUSG00000031954.7_112495123_112580923_2	chr8	-	1172	7	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	112580923	112495122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_112495420_112505882_112506042_112557507_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ENSMUSG00000031954.7_112495123_112580923_3	chr8	-	1173	7	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	112580923	112495122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580780
ENSMUSG00000031954.7_112495123_112580923_4	chr8	-	1172	7	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	112580923	112495122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568617_112571725_112571844_112580775
ENSMUSG00000031954.7_112495123_112580923_5	chr8	-	1173	7	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	112580923	112495122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_112495420_112505882_112506033_112557497_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ENSMUSG00000031954.7_112495123_112580923_6	chr8	-	1172	7	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	112580923	112495122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571838_112580775
ENSMUSG00000031955.11_112437106_112447388_1	chr8	-	2446	6	ISM	ENSMUSG00000031955.11	ENSMUST00000212349.2	3116	7	11380	-3	576	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCCTACAGAAATGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	112447388	112437105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330
ENSMUSG00000031955.11_112437514_112439324_1	chr8	-	605	2	ISM	ENSMUSG00000031955.11	ENST00000393420.10	2665	6	8640	0	8640	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAGGACCAGGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	112439324	112437513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112438027_112439232
ENSMUSG00000031955.11_112437514_112447834_1	chr8	-	2484	6	ISM	ENSMUSG00000031955.11	ENSMUST00000212349.2	3116	7	10934	405	130	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAGGACCAGGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	112447834	112437513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330
ENSMUSG00000031955.11_112437763_112458737_1	chr8	-	2431	7	FSM	ENSMUSG00000031955.11	ENSMUST00000212349.2	3116	7	31	654	31	-249	multi-exon	FALSE	canonical	NA	NA	NA	NA	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACAAGCTTGTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	112458737	112437762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112458670
ENSMUSG00000031955.11_112437857_112440336_1	chr8	-	626	3	ISM	ENSMUSG00000031955.11	ENST00000393420.10	2665	6	7628	343	7628	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACAGATGCAGTGGACG	NA	NA	NA	NA	NA	NA	NA	NA	112440336	112437856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112438027_112439232_112439323_112439970
ENSMUSG00000031955.11_112437917_112440406_1	chr8	-	636	3	ISM	ENSMUSG00000031955.11	ENST00000393420.10	2665	6	7558	403	7558	-403	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCAGACCGACAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	112440406	112437916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112438027_112439232_112439323_112439970
ENSMUSG00000031955.11_112439256_112440558_1	chr8	-	655	2	ISM	ENSMUSG00000031955.11	ENST00000393420.10	2665	6	7406	1742	7406	-1742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCCAACTGGAGTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	112440558	112439255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112439323_112439970
ENSMUSG00000031955.11_112440510_112441935_1	chr8	-	631	2	ISM	ENSMUSG00000031955.11	ENST00000393420.10	2665	6	6029	2996	6029	-2996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTACCTCTGAGCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	112441935	112440509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112441069_112441863
ENSMUSG00000031955.11_112440653_112442297_1	chr8	-	641	3	NNC	ENSMUSG00000031955.11	novel	2665	6	NA	NA	5667	-3139	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGAGGTGGTGGTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	112442297	112440652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_112441069_112441857_112442032_112442246
ENSMUSG00000031955.11_112440659_112442297_1	chr8	-	629	3	ISM	ENSMUSG00000031955.11	ENST00000393420.10	2665	6	5667	3145	5667	-3145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCCTTGGAGGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	112442297	112440658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112441069_112441863_112442032_112442246
ENSMUSG00000031955.11_112440800_112447366_1	chr8	-	635	4	ISM	ENSMUSG00000031955.11	ENST00000393420.10	2665	6	598	3286	598	-3286	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTCCTGAGGTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	112447366	112440799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112441069_112441863_112442032_112442246_112442409_112447330
ENSMUSG00000031955.11_112440862_112447422_1	chr8	-	635	4	NNC	ENSMUSG00000031955.11	novel	2665	6	NA	NA	542	-3348	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCCCTGGTTTGCGGCG	NA	NA	NA	NA	NA	NA	NA	NA	112447422	112440861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_112441069_112441857_112442032_112442246_112442409_112447330
ENSMUSG00000031955.11_112440933_112447569_1	chr8	-	711	4	NNC	ENSMUSG00000031955.11	novel	2665	6	NA	NA	395	-3419	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTCCTCCCGACTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	112447569	112440932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_112441069_112441857_112442032_112442246_112442409_112447330
ENSMUSG00000031955.11_112441913_112447697_1	chr8	-	648	3	ISM	ENSMUSG00000031955.11	ENST00000393420.10	2665	6	267	4399	267	-4399	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATCACTGATGCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	112447697	112441912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112442032_112442246_112442409_112447330
ENSMUSG00000031955.11_112441949_112447768_1	chr8	-	683	3	ISM	ENSMUSG00000031955.11	ENST00000393420.10	2665	6	196	4435	196	-4435	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAAAGGCCTGCTCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	112447768	112441948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112442032_112442246_112442409_112447330
ENSMUSG00000031958.17_112353657_112355219_1	chr8	-	693	6	ISM	ENSMUSG00000031958.17	ENST00000300051.8	1443	10	1454	0	1454	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGTGTAACCCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	112355219	112353656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112353823_112353909_112354022_112354119_112354211_112354730_112354859_112354941_112355071_112355152
ENSMUSG00000031958.17_112353657_112355428_1	chr8	-	902	6	ISM	ENSMUSG00000031958.17	ENST00000300051.8	1443	10	1245	0	1245	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGTGTAACCCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	112355428	112353656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112353823_112353909_112354022_112354119_112354211_112354730_112354859_112354941_112355071_112355152
ENSMUSG00000031958.17_112353807_112355665_1	chr8	-	798	7	ISM	ENSMUSG00000031958.17	ENST00000300051.8	1443	10	1008	150	1008	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGGACATGCACTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	112355665	112353806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112353823_112353909_112354022_112354119_112354211_112354730_112354859_112354941_112355071_112355152_112355427_112355617
ENSMUSG00000031958.17_112353944_112355710_1	chr8	-	788	6	NNC	ENSMUSG00000031958.17	novel	1443	10	NA	NA	963	-287	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGTCAAGGCCTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	112355710	112353943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_112354022_112354119_112354211_112354735_112354859_112354941_112355071_112355152_112355427_112355617
ENSMUSG00000031958.17_112353954_112355706_1	chr8	-	779	6	ISM	ENSMUSG00000031958.17	ENST00000300051.8	1443	10	967	297	967	-297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGCAGAGGAGGGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	112355706	112353953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112354022_112354119_112354211_112354730_112354859_112354941_112355071_112355152_112355427_112355617
ENSMUSG00000031958.17_112354171_112355976_1	chr8	-	795	6	ISM	ENSMUSG00000031958.17	ENST00000300051.8	1443	10	697	514	697	-514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGATCTTGGTAGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	112355976	112354170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112354211_112354730_112354859_112354941_112355071_112355152_112355427_112355617_112355778_112355912
ENSMUSG00000031958.17_112354842_112356286_1	chr8	-	771	6	ISM	ENSMUSG00000031958.17	ENST00000300051.8	1443	10	387	1185	387	-1185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGGCTCTCACTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	112356286	112354841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112354859_112354941_112355071_112355152_112355427_112355617_112355778_112355912_112356055_112356237
ENSMUSG00000031958.17_112354942_112356381_1	chr8	-	849	5	ISM	ENSMUSG00000031958.17	ENST00000300051.8	1443	10	292	1285	292	-1285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGCCGGGGACACGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	112356381	112354941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112355071_112355152_112355427_112355617_112355778_112355912_112356055_112356237
ENSMUSG00000031958.17_112355015_112356612_1	chr8	-	812	6	ISM	ENSMUSG00000031958.17	ENST00000300051.8	1443	10	61	1358	61	-1358	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGGCACCCACGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112356612	112355014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_112355071_112355152_112355427_112355617_112355778_112355912_112356055_112356237_112356380_112356574
ENSMUSG00000031960.15_111760548_111781738_1	chr8	+	3178	21	FSM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	14	2558	14	-466	multi-exon	FALSE	canonical	NA	NA	NA	NA	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCCCAGGCCACAGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	111760547	111781738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111760668_111781765_1	chr8	+	3085	21	FSM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	134	2531	134	-439	multi-exon	FALSE	canonical	NA	NA	NA	NA	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCTTCAGGAAGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	111760667	111781765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111760740_111781829_1	chr8	+	3077	21	FSM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	206	2467	206	-375	multi-exon	FALSE	canonical	NA	NA	NA	NA	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGATGGGAGGGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	111760739	111781829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111763540_111781943_1	chr8	+	3036	20	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	3006	2353	3006	-261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTCTCAGCAGCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	111763539	111781943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111766762_111782204_1	chr8	+	3133	19	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	6228	2092	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATGTCATGCGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	111766761	111782204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111766930_111770309_1	chr8	+	796	7	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	168	11895	168	-11895	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGTGAAGGACATCATTA	NA	NA	NA	NA	NA	NA	NA	NA	111766929	111770309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274
ENSMUSG00000031960.15_111767266_111782380_1	chr8	+	3081	18	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	6732	1916	504	176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCACTGTTCTTAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	111767265	111782380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111767325_111771538_1	chr8	+	822	7	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	563	10666	563	-10666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATTCCCAGTGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	111767324	111771538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509
ENSMUSG00000031960.15_111768135_111782547_1	chr8	+	3114	17	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	7601	1749	1373	343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCCCAGCCCTAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	111768134	111782547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111768145_111772188_1	chr8	+	863	7	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	1383	10016	1383	-10016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACCTCATCATGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	111768144	111772188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158
ENSMUSG00000031960.15_111768224_111782611_1	chr8	+	3089	17	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	7690	1685	1462	407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTGCTTATGACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	111768223	111782611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111768252_111772303_1	chr8	+	871	7	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	1490	9901	1490	-9901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGCTGAGCCTTCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	111768251	111772303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158
ENSMUSG00000031960.15_111768888_111782780_1	chr8	+	3165	16	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	8354	1516	2126	576	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAGGAATAACAACAGATC	NA	NA	NA	NA	NA	NA	NA	NA	111768887	111782780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111768959_111773625_1	chr8	+	798	7	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	2197	8579	2197	-8579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCACTGGCCAGGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	111768958	111773625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562
ENSMUSG00000031960.15_111769390_111774583_1	chr8	+	800	7	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	2628	7621	2628	-7621	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACGTGCTGCACATAGGA	NA	NA	NA	NA	NA	NA	NA	NA	111769389	111774583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543
ENSMUSG00000031960.15_111769916_111776369_1	chr8	+	811	7	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	3154	5835	3154	-5835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATCCTCAACTTCGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	111769915	111776369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330
ENSMUSG00000031960.15_111770305_111776472_1	chr8	+	826	6	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	3543	5732	3543	-5732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTCCACCCAGCAAATC	NA	NA	NA	NA	NA	NA	NA	NA	111770304	111776472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330
ENSMUSG00000031960.15_111770319_111783126_1	chr8	+	3082	13	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	9785	1170	3557	922	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCGGGCTGCTGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	111770318	111783126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111770370_111783179_1	chr8	+	3084	13	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	9836	1117	3608	975	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAAGGTGCTGTGCGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	111770369	111783179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111771509_111776991_1	chr8	+	786	6	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	4747	5213	4747	-5213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCCCCTGGCAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	111771508	111776991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976
ENSMUSG00000031960.15_111772246_111783464_1	chr8	+	3101	11	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	11712	832	5484	-832	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGGCTGTGCGCTGGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	111772245	111783464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111773657_111783596_1	chr8	+	3081	10	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	13123	700	6895	-700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCACGCGGCTGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	111773656	111783596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111773672_111779942_1	chr8	+	805	6	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	6910	2262	6910	-2262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTTCGCTCTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	111773671	111779942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822
ENSMUSG00000031960.15_111774544_111780642_1	chr8	+	901	6	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	7782	1562	7782	-1562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTTGGCAGTGCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	111774543	111780642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779987_111780520
ENSMUSG00000031960.15_111774544_111783723_1	chr8	+	3123	9	ISM	ENSMUSG00000031960.15_ENSMUSG00000109941.2	ENST00000674512.1	3112	19	7782	-1519	7782	-573	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCGCCTGGGCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	111774543	111783723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111774544_111783773_1	chr8	+	3173	9	ISM	ENSMUSG00000031960.15_ENSMUSG00000109941.2	ENST00000674512.1	3112	19	7782	-1569	7782	-523	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTTTGGTGCGGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	111774543	111783773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111776402_111781164_1	chr8	+	825	7	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	9640	1040	9640	-1040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGACGCATTCTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	111776401	111781164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111776538_111776976_111777162_111779044_111779154_111779822_111779987_111780520_111780641_111780756_111780844_111781140
ENSMUSG00000031960.15_111776420_111783889_1	chr8	+	3086	8	ISM	ENSMUSG00000031960.15_ENSMUSG00000109941.2	ENST00000674512.1	3112	19	9658	-1685	-6551	-407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTGATGGTCGCCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	111776419	111783889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111776463_111781205_1	chr8	+	805	7	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	9701	999	9701	-999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGACAATGAGGCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	111776462	111781205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111776538_111776976_111777162_111779044_111779154_111779822_111779987_111780520_111780641_111780756_111780844_111781140
ENSMUSG00000031960.15_111776463_111783957_1	chr8	+	3111	8	ISM	ENSMUSG00000031960.15_ENSMUSG00000109941.2	ENST00000674512.1	3112	19	9701	-1753	-6508	-339	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACTGGACAGCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	111776462	111783957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111776519_111781253_1	chr8	+	797	7	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	9757	951	9757	-951	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAGAACTTCCCACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	111776518	111781253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111776538_111776976_111777162_111779044_111779154_111779822_111779987_111780520_111780641_111780756_111780844_111781140
ENSMUSG00000031960.15_111777042_111781731_1	chr8	+	795	7	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	10280	473	10280	-473	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGTCCGCCCAGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	111777041	111781731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111777162_111779044_111779154_111779822_111779987_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111777069_111784102_1	chr8	+	3089	7	ISM	ENSMUSG00000031960.15_ENSMUSG00000109941.2	ENST00000674512.1	3112	19	10307	-1898	-5902	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAGATGGACCCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	111777068	111784102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111779045_111781872_1	chr8	+	816	6	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	12283	332	12283	-332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCAGACATGTCCGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	111779044	111781872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111779154_111779822_111779987_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111780521_111782204_1	chr8	+	875	4	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	13759	0	13759	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATGTCATGCGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	111780520	111782204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031962.7_123574705_123584221_1	chr8	+	843	3	ISM	ENSMUSG00000031962.7	ENSMUST00000034443.7	3251	14	0	9915	0	-9531	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCTGGACCGCGAGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	123574704	123584221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123575269_123583240_123583397_123584098
ENSMUSG00000031962.7_123574830_123586029_1	chr8	+	804	4	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	-280	7723	125	-7723	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGAGATCGTTGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	123574829	123586029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123575269_123583240_123583397_123584098_123584255_123585976
ENSMUSG00000031962.7_123574979_123587637_1	chr8	+	808	5	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	-131	6115	-131	-6115	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGGTTCTCCATCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	123574978	123587637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123575269_123583240_123583397_123584098_123584255_123585976_123586122_123587576
ENSMUSG00000031962.7_123575126_123588224_1	chr8	+	790	6	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	16	5528	16	-5528	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCAGACATGTCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	123575125	123588224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123575269_123583240_123583397_123584098_123584255_123585976_123586122_123587576_123587738_123588195
ENSMUSG00000031962.7_123575142_123592069_1	chr8	+	1943	12	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	32	1683	32	-1683	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTGCTTGCCGCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	123575141	123592069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123575269_123583240_123583397_123584098_123584255_123585976_123586122_123587576_123587738_123588195_123588325_123588716_123588903_123590043_123590298_123590981_123591125_123591237_123591478_123591728_123591956_123592050
ENSMUSG00000031962.7_123575170_123588281_1	chr8	+	803	6	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	60	5471	60	-5471	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGACATCAACGACAATG	NA	NA	NA	NA	NA	NA	NA	NA	123575169	123588281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123575269_123583240_123583397_123584098_123584255_123585976_123586122_123587576_123587738_123588195
ENSMUSG00000031962.7_123575187_123592125_1	chr8	+	1954	12	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	77	1627	77	-1627	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	849	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGCATGGCCTACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	123575186	123592125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123575269_123583240_123583397_123584098_123584255_123585976_123586122_123587576_123587738_123588195_123588325_123588716_123588903_123590043_123590298_123590981_123591125_123591237_123591478_123591728_123591956_123592050
ENSMUSG00000031962.7_123575217_123592201_1	chr8	+	2000	12	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	107	1551	107	-1551	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAAGGAGAGGAGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	123575216	123592201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123575269_123583240_123583397_123584098_123584255_123585976_123586122_123587576_123587738_123588195_123588325_123588716_123588903_123590043_123590298_123590981_123591125_123591237_123591478_123591728_123591956_123592050
ENSMUSG00000031962.7_123583261_123592353_1	chr8	+	1947	12	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	8151	1399	8151	-1399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGCGCCACCCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	123583260	123592353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123583397_123584098_123584255_123585976_123586122_123587576_123587738_123588195_123588325_123588716_123588903_123590043_123590298_123590981_123591125_123591237_123591478_123591728_123591956_123592050_123592204_123592336
ENSMUSG00000031962.7_123583315_123592400_1	chr8	+	1940	12	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	8205	1352	8205	-1352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCCACCCCTGCGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	123583314	123592400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123583397_123584098_123584255_123585976_123586122_123587576_123587738_123588195_123588325_123588716_123588903_123590043_123590298_123590981_123591125_123591237_123591478_123591728_123591956_123592050_123592204_123592336
ENSMUSG00000031962.7_123583368_123592450_1	chr8	+	1937	12	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	8258	1302	8258	-1302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGAGTGCTTCCCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	123583367	123592450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123583397_123584098_123584255_123585976_123586122_123587576_123587738_123588195_123588325_123588716_123588903_123590043_123590298_123590981_123591125_123591237_123591478_123591728_123591956_123592050_123592204_123592336
ENSMUSG00000031962.7_123584102_123593605_1	chr8	+	2000	12	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	8992	147	8992	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1004	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTCTCATCTATGACT	NA	NA	NA	NA	NA	NA	NA	NA	123584101	123593605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123584255_123585976_123586122_123587576_123587738_123588195_123588325_123588716_123588903_123590043_123590298_123590981_123591125_123591237_123591478_123591728_123591956_123592050_123592204_123592336_123592502_123593561
ENSMUSG00000031962.7_123584191_123593619_1	chr8	+	1925	12	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	9081	133	9081	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTACGAGGGAGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	123584190	123593619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123584255_123585976_123586122_123587576_123587738_123588195_123588325_123588716_123588903_123590043_123590298_123590981_123591125_123591237_123591478_123591728_123591956_123592050_123592204_123592336_123592502_123593561
ENSMUSG00000031962.7_123584231_123593692_1	chr8	+	1958	12	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	9121	60	9121	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	996	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTATGACTACCTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	123584230	123593692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123584255_123585976_123586122_123587576_123587738_123588195_123588325_123588716_123588903_123590043_123590298_123590981_123591125_123591237_123591478_123591728_123591956_123592050_123592204_123592336_123592502_123593561
ENSMUSG00000031962.7_123587572_123591124_1	chr8	+	878	5	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	12462	2628	12462	-2628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGGAAGTGGGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	123587571	123591124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123587738_123588195_123588325_123588716_123588903_123590043_123590298_123590981
ENSMUSG00000031962.7_123590125_123592085_1	chr8	+	815	5	ISM	ENSMUSG00000031962.7	ENSMUST00000034443.7	3251	14	15420	2051	15015	-1667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCGCACACGGTTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	123590124	123592085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123590298_123590981_123591125_123591237_123591478_123591728_123591969_123592066
ENSMUSG00000031962.7_123590184_123592134_1	chr8	+	805	5	ISM	ENSMUSG00000031962.7	ENSMUST00000034443.7	3251	14	15479	2002	15074	-1618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTACAAGAGGACCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	123590183	123592134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123590298_123590981_123591125_123591237_123591478_123591728_123591969_123592066
ENSMUSG00000031962.7_123590989_123592348_1	chr8	+	765	5	ISM	ENSMUSG00000031962.7	ENSMUST00000034443.7	3251	14	16284	1788	15879	-1404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACCAGCTGCGCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	123590988	123592348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123591125_123591237_123591478_123591728_123591969_123592066_123592204_123592336
ENSMUSG00000031962.7_123591058_123592486_1	chr8	+	834	5	ISM	ENSMUSG00000031962.7	ENSMUST00000034443.7	3251	14	16353	1650	15948	-1266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCATCAGTGATGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	123591057	123592486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123591125_123591237_123591478_123591728_123591969_123592066_123592204_123592336
ENSMUSG00000031962.7_123591295_123593649_1	chr8	+	813	5	ISM	ENSMUSG00000031962.7	ENSMUST00000034443.7	3251	14	16590	487	16185	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGCTGAGCTCCATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	123591294	123593649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123591478_123591728_123591969_123592066_123592204_123592336_123592502_123593561
ENSMUSG00000031962.7_123591385_123593746_1	chr8	+	820	5	ISM	ENSMUSG00000031962.7	ENSMUST00000034443.7	3251	14	16680	390	16275	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGACATCAGTGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	123591384	123593746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123591478_123591728_123591969_123592066_123592204_123592336_123592502_123593561
ENSMUSG00000031962.7_123591447_123593786_1	chr8	+	798	5	ISM	ENSMUSG00000031962.7	ENSMUST00000034443.7	3251	14	16742	350	16337	34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGGATACGCCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	123591446	123593786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123591478_123591728_123591969_123592066_123592204_123592336_123592502_123593561
ENSMUSG00000031962.7_123592065_123594136_1	chr8	+	879	3	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	16955	-384	16955	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGTGCCCAGTGCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	123592064	123594136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123592204_123592336_123592502_123593561
ENSMUSG00000031962.7_123592110_123594136_1	chr8	+	834	3	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	17000	-384	17000	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGTGCCCAGTGCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	123592109	123594136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123592204_123592336_123592502_123593561
ENSMUSG00000031962.7_123592182_123594137_1	chr8	+	763	3	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	17072	-385	17072	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGCCCAGTGCCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	123592181	123594137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123592204_123592336_123592502_123593561
ENSMUSG00000031963.9_23134939_23288946_1	chr9	+	938	10	ISM	ENSMUSG00000031963.9	ENST00000648848.1	2676	14	71	107261	71	-107261	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCTCAGTCAACTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	23134938	23288946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_23135070_23136053_23136140_23165667_23165768_23204700_23204784_23208501_23208593_23212235_23212319_23277487_23277588_23285128_23285239_23286861_23287003_23288933
ENSMUSG00000031963.9_23134958_23289031_1	chr9	+	1004	10	ISM	ENSMUSG00000031963.9	ENST00000648848.1	2676	14	90	107176	90	-107176	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAGGTATGTAGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	23134957	23289031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_23135070_23136053_23136140_23165667_23165768_23204700_23204784_23208501_23208593_23212235_23212319_23277487_23277588_23285128_23285239_23286861_23287003_23288933
ENSMUSG00000031963.9_23136055_23292756_1	chr9	+	930	10	ISM	ENSMUSG00000031963.9	ENST00000648848.1	2676	14	1187	103451	1187	-103451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGCACTGAAAGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	23136054	23292756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_23136140_23165667_23165768_23204700_23204784_23208501_23208593_23212235_23212319_23277487_23277588_23285128_23285239_23286861_23287003_23288933_23289039_23292724
ENSMUSG00000031963.9_23165669_23317911_1	chr9	+	979	10	ISM	ENSMUSG00000031963.9	ENST00000648848.1	2676	14	30801	78296	30801	-78296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGATGGGAACTTCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	23165668	23317911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_23165768_23204700_23204784_23208501_23208593_23212235_23212319_23277487_23277588_23285128_23285239_23286861_23287003_23288933_23289039_23292724_23292771_23317790
ENSMUSG00000031963.9_23277488_23384872_1	chr9	+	970	7	ISM	ENSMUSG00000031963.9	ENST00000648848.1	2676	14	142620	11335	142620	-11335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAAGCCCCGGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	23277487	23384872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_23277588_23285128_23285239_23286861_23287003_23288933_23289039_23292724_23292771_23317790_23318128_23384741
ENSMUSG00000031963.9_23285228_23395313_1	chr9	+	938	7	ISM	ENSMUSG00000031963.9	ENST00000648848.1	2676	14	150360	894	150360	-894	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTCAGCGATGACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	23285227	23395313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_23285239_23286861_23287003_23288933_23289039_23292724_23292771_23317790_23318128_23384741_23384873_23395146
ENSMUSG00000031963.9_23286970_23395443_1	chr9	+	949	6	ISM	ENSMUSG00000031963.9	ENST00000648848.1	2676	14	152102	764	152102	-764	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTACATATATATAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	23286969	23395443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_23287003_23288933_23289039_23292724_23292771_23317790_23318128_23384741_23384873_23395146
ENSMUSG00000031963.9_23317880_23395706_1	chr9	+	939	3	ISM	ENSMUSG00000031963.9	ENST00000648848.1	2676	14	183012	501	183012	-501	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGATTTGAGTCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	23317879	23395706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_23318128_23384741_23384873_23395146
ENSMUSG00000031963.9_23317952_23395764_1	chr9	+	925	3	ISM	ENSMUSG00000031963.9	ENST00000648848.1	2676	14	183084	443	183084	-443	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGTATTTTGTATTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	23317951	23395764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_23318128_23384741_23384873_23395146
ENSMUSG00000031963.9_23384741_23395936_1	chr9	+	922	2	ISM	ENSMUSG00000031963.9	ENST00000648848.1	2676	14	249873	271	249873	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATATTGCCAAATAATTT	NA	NA	NA	NA	NA	NA	NA	NA	23384740	23395936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_23384873_23395146
ENSMUSG00000031963.9_23384787_23395997_1	chr9	+	937	2	ISM	ENSMUSG00000031963.9	ENST00000648848.1	2676	14	249919	210	249919	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTGCAATGGATATGAC	NA	NA	NA	NA	NA	NA	NA	NA	23384786	23395997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_23384873_23395146
ENSMUSG00000031963.9_23384839_23396048_1	chr9	+	936	2	ISM	ENSMUSG00000031963.9	ENST00000648848.1	2676	14	249971	159	249971	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGGATAACATTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	23384838	23396048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_23384873_23395146
ENSMUSG00000031967.16_124204679_124230101_1	chr8	+	3636	17	FSM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	37	554	37	-554	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTCTGGAGTCGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	124204678	124230101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ENSMUSG00000031967.16_124207867_124230304_1	chr8	+	3586	15	ISM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	3225	351	3225	-351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCTTTATCCTGGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	124207866	124230304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ENSMUSG00000031967.16_124212762_124230511_1	chr8	+	3555	13	ISM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	8120	144	8120	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATACTGGGTGTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	124212761	124230511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ENSMUSG00000031967.16_124214945_124230655_1	chr8	+	3609	11	ISM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	10303	0	10303	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGGGAGTTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	124214944	124230655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ENSMUSG00000031967.16_124215044_124230655_1	chr8	+	3510	11	ISM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	10402	0	10402	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGGGAGTTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	124215043	124230655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ENSMUSG00000031969.17_26885431_26910767_1	chr9	-	2790	11	FSM	ENSMUSG00000031969.17	ENSMUST00000120367.8	2885	11	95	0	78	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCATGTTACGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	26910767	26885430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901489_26901874_26901989_26902535_26902706_26903455_26903557_26910689
ENSMUSG00000031969.17_26885565_26910845_1	chr9	-	2734	11	FSM	ENSMUSG00000031969.17	ENSMUST00000120367.8	2885	11	17	134	0	-125	multi-exon	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGACAAACTTATTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	26910845	26885564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901489_26901874_26901989_26902535_26902706_26903455_26903557_26910689
ENSMUSG00000031971.16_124567855_124585948_1	chr8	-	1784	3	FSM	ENSMUSG00000031971.16	ENSMUST00000034452.12	2390	3	321	285	321	-272	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGGTGTGTGGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	124585948	124567854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_124569258_124571918_124572185_124585833
ENSMUSG00000031972.6_124618508_124620014_1	chr8	-	972	5	ISM	ENSMUSG00000031972.6	ENST00000366683.4	1304	6	437	-7	437	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAACTGTGTGTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124620014	124618507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_124618814_124618967_124619150_124619282_124619475_124619571_124619734_124619884
ENSMUSG00000031972.6_124618508_124620096_1	chr8	-	1054	5	ISM	ENSMUSG00000031972.6	ENST00000366683.4	1304	6	355	-7	355	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAACTGTGTGTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124620096	124618507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_124618814_124618967_124619150_124619282_124619475_124619571_124619734_124619884
ENSMUSG00000031972.6_124618508_124621490_1	chr8	-	1438	7	NNC	ENSMUSG00000031972.6	novel	1446	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAACTGTGTGTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124621490	124618507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_124618892_124618967_124619142_124619282_124619475_124619571_124619734_124619884_124620210_124620307_124620449_124621430
ENSMUSG00000031972.6_124618508_124621490_2	chr8	-	1438	7	NNC	ENSMUSG00000031972.6	novel	1446	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAACTGTGTGTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124621490	124618507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_124618892_124618967_124619150_124619282_124619475_124619571_124619734_124619884_124620210_124620315_124620449_124621430
ENSMUSG00000031972.6_124618508_124621490_3	chr8	-	1439	7	NNC	ENSMUSG00000031972.6	novel	1446	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAACTGTGTGTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124621490	124618507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_124618892_124618967_124619150_124619282_124619475_124619571_124619734_124619884_124620210_124620307_124620442_124621430
ENSMUSG00000031972.6_124618682_124620144_1	chr8	-	928	5	ISM	ENSMUSG00000031972.6	ENST00000366683.4	1304	6	307	167	307	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTGGCCCCGTCCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	124620144	124618681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_124618814_124618967_124619150_124619282_124619475_124619571_124619734_124619884
ENSMUSG00000031974.9_124681093_124689829_1	chr8	-	864	7	NNC	ENSMUSG00000031974.9	novel	1700	13	NA	NA	8084	-1893	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	461	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATATAATGGAGCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	124689829	124681092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_124681315_124681461_124681497_124682511_124682556_124685237_124685419_124686948_124687023_124688734_124688945_124689731
ENSMUSG00000031974.9_124681161_124693234_1	chr8	-	966	9	ISM	ENSMUSG00000031974.9	ENST00000344517.5	1700	13	4679	1961	4679	-1961	internal_fragment	FALSE	canonical	NA	NA	NA	NA	721	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATGAAGAGCTGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	124693234	124681160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_124681315_124681461_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204
ENSMUSG00000031974.9_124681248_124693261_1	chr8	-	906	9	ISM	ENSMUSG00000031974.9	ENST00000344517.5	1700	13	4652	2048	4652	-2048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGATCATAGCCCACCG	NA	NA	NA	NA	NA	NA	NA	NA	124693261	124681247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_124681315_124681461_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204
ENSMUSG00000031974.9_124681298_124693357_1	chr8	-	952	9	ISM	ENSMUSG00000031974.9	ENST00000344517.5	1700	13	4556	2098	4556	-2098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCACCTGGTCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	124693357	124681297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_124681315_124681461_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204
ENSMUSG00000031974.9_124682516_124694792_1	chr8	-	943	8	ISM	ENSMUSG00000031974.9	ENST00000344517.5	1700	13	3121	3316	3121	-3316	internal_fragment	TRUE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTAAGACAGCCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	124694792	124682515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739
ENSMUSG00000031974.9_124685236_124694874_1	chr8	-	987	7	ISM	ENSMUSG00000031974.9	ENST00000344517.5	1700	13	3039	6036	3039	-6036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCCCCACGCTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	124694874	124685235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739
ENSMUSG00000031974.9_124685354_124696502_1	chr8	-	913	8	ISM	ENSMUSG00000031974.9	ENST00000344517.5	1700	13	1411	6154	1411	-6154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACAGCCCAGCAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	124696502	124685353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458
ENSMUSG00000031974.9_124688808_124697743_1	chr8	-	888	7	ISM	ENSMUSG00000031974.9	ENST00000344517.5	1700	13	170	9608	170	-9608	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGGCCCAAGTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	124697743	124688807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709
ENSMUSG00000031974.9_124688852_124697801_1	chr8	-	902	7	ISM	ENSMUSG00000031974.9	ENST00000344517.5	1700	13	112	9652	112	-9652	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGATTTCAGTCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	124697801	124688851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709
ENSMUSG00000031974.9_124688879_124697804_1	chr8	-	877	7	NNC	ENSMUSG00000031974.9	novel	4306	13	NA	NA	109	-9679	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGCTCGCCCAGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	124697804	124688878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696657_124697705
ENSMUSG00000031974.9_124688904_124697855_1	chr8	-	904	7	ISM	ENSMUSG00000031974.9	ENST00000344517.5	1700	13	58	9704	58	-9704	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCAGAAACGTGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	124697855	124688903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709
ENSMUSG00000031974.9_124694789_124709332_1	chr8	-	682	4	ISM	ENSMUSG00000031974.9	ENSMUST00000075578.7	4306	13	529	15591	529	-15589	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGAAACTGTCCAAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	124709332	124694788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_124694875_124696458_124696662_124697709_124697911_124709140
ENSMUSG00000031974.9_124696577_124709552_1	chr8	-	698	3	ISM	ENSMUSG00000031974.9	ENSMUST00000075578.7	4306	13	309	17379	309	-17377	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCGAATTAATTAACCGCC	NA	NA	NA	NA	NA	NA	NA	NA	124709552	124696576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_124696662_124697709_124697911_124709140
ENSMUSG00000031979.18_125247543_125278228_1	chr8	+	2269	18	FSM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	37	519	37	-519	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCATCCTGGCAGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	125247542	125278228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ENSMUSG00000031979.18_125252368_125278389_1	chr8	+	2284	17	ISM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	4862	358	4862	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTTGCTCTAGTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	125252367	125278389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ENSMUSG00000031979.18_125252416_125278446_1	chr8	+	2293	17	ISM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	4910	301	4910	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACCAGCTGATGTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	125252415	125278446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ENSMUSG00000031979.18_125252460_125278512_1	chr8	+	2315	17	ISM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	4954	235	4954	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCAGGGCAAGCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	125252459	125278512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ENSMUSG00000031979.18_125255743_125278747_1	chr8	+	2384	15	ISM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	8237	0	8237	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	125255742	125278747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ENSMUSG00000031981.8_125302852_125321501_1	chr8	+	568	4	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	-31	19865	2	-19865	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGGGGCTGGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	125302851	125321501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125303097_125315771_125315842_125318418_125318538_125321367
ENSMUSG00000031981.8_125303016_125325532_1	chr8	+	657	6	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	133	15834	133	-15834	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGGCAGGGCCTACTGC	NA	NA	NA	NA	NA	NA	NA	NA	125303015	125325532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125303097_125315771_125315842_125318418_125318538_125321367_125321502_125324237_125324407_125325448
ENSMUSG00000031981.8_125315771_125327226_1	chr8	+	663	6	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	12888	14140	12888	-14140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGGCTCTGCTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	125315770	125327226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125315842_125318418_125318538_125321367_125321502_125324237_125324407_125325448_125325533_125327140
ENSMUSG00000031981.8_125318469_125330987_1	chr8	+	601	6	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	15586	10379	15586	-10379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGCCCTGGAGGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	125318468	125330987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125318538_125321367_125321502_125324237_125324407_125325448_125325533_125327140_125327227_125330928
ENSMUSG00000031981.8_125318515_125331046_1	chr8	+	614	6	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	15632	10320	15632	-10320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCCGTGGCTCCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	125318514	125331046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125318538_125321367_125321502_125324237_125324407_125325448_125325533_125327140_125327227_125330928
ENSMUSG00000031981.8_125321460_125332171_1	chr8	+	569	6	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	18577	9195	18577	-9195	internal_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTCCCTGACCGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	125321459	125332171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125321502_125324237_125324407_125325448_125325533_125327140_125327227_125330928_125331090_125332144
ENSMUSG00000031981.8_125324364_125332469_1	chr8	+	567	6	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	21481	8897	21481	-8897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGTACCATGCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	125324363	125332469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125324407_125325448_125325533_125327140_125327227_125330928_125331090_125332144_125332303_125332434
ENSMUSG00000031981.8_125324391_125332570_1	chr8	+	641	6	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	21508	8796	21508	-8796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCACCTTTGAGCCGCAT	NA	NA	NA	NA	NA	NA	NA	NA	125324390	125332570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125324407_125325448_125325533_125327140_125327227_125330928_125331090_125332144_125332303_125332434
ENSMUSG00000031981.8_125327139_125332644_1	chr8	+	617	4	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	24256	8722	24256	-8722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGAGCCCATCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	125327138	125332644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125327227_125330928_125331090_125332144_125332303_125332434
ENSMUSG00000031981.8_125327139_125334730_1	chr8	+	653	5	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	24256	6636	24256	-6636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	621	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCCTCTGCTGTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	125327138	125334730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125327227_125330928_125331090_125332144_125332303_125332434_125332644_125334693
ENSMUSG00000031981.8_125330926_125335913_1	chr8	+	637	4	NNC	ENSMUSG00000031981.8	novel	1794	16	NA	NA	28043	-5453	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATGCAGCCGCCTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	125330925	125335913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_125331090_125332144_125332303_125332434_125332668_125335831
ENSMUSG00000031981.8_125331024_125338262_1	chr8	+	572	6	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	28141	3104	28141	-3104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTTGAATATGTTCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	125331023	125338262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125331090_125332144_125332303_125332434_125332644_125334693_125334731_125335831_125335913_125338241
ENSMUSG00000031981.8_125332144_125340628_1	chr8	+	678	7	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	29261	738	29261	-738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGGTCTGGCTTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	125332143	125340628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125332303_125332434_125332644_125334693_125334731_125335831_125335913_125338241_125338300_125340155_125340221_125340559
ENSMUSG00000031981.8_125332274_125341365_1	chr8	+	627	8	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	29391	1	29391	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAGAAACAAGTCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	125332273	125341365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125332303_125332434_125332644_125334693_125334731_125335831_125335913_125338241_125338300_125340155_125340221_125340559_125340629_125341286
ENSMUSG00000031981.8_125332432_125341374_2	chr8	+	610	7	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	29549	-8	29549	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCAGATGTGTGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	125332431	125341374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125332644_125334693_125334731_125335831_125335913_125338241_125338300_125340155_125340221_125340559_125340629_125341286
ENSMUSG00000031982.6_125448898_125457692_1	chr8	+	620	4	ISM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	20	3170	20	-3170	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTGTGTCTCAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	125448897	125457692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530
ENSMUSG00000031982.6_125455142_125460695_1	chr8	+	600	4	ISM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	6264	167	6264	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTCCCTTATAGGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	125455141	125460695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125455222_125457530_125457756_125458535_125458681_125460545
ENSMUSG00000031983.8_125362843_125365889_1	chr8	-	1921	2	ISM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	24219	348	24219	-348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCCGCCACATGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	125365889	125362842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125364704_125365829
ENSMUSG00000031983.8_125363151_125366142_1	chr8	-	1866	2	ISM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	23966	656	23966	-656	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTGGTCCCATGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	125366142	125363150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125364704_125365829
ENSMUSG00000031983.8_125363206_125366196_1	chr8	-	1865	2	ISM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	23912	711	23912	-711	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCATAACATTGGTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	125366196	125363205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125364704_125365829
ENSMUSG00000031983.8_125363576_125389766_1	chr8	-	1884	4	FSM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	342	1081	342	-1081	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCTCCGAGAGCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	125389766	125363575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_125364704_125365829_125366355_125378109_125378161_125389586
ENSMUSG00000031983.8_125363668_125389842_1	chr8	-	1868	4	FSM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	266	1173	266	-1173	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGCTAAGCAAATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	125389842	125363667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_125364704_125365829_125366355_125378109_125378161_125389586
ENSMUSG00000031984.9_125565817_125568443_1	chr8	-	1053	4	ISM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	21416	590	21416	-590	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACACCTCACAAGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	125568443	125565816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425
ENSMUSG00000031984.9_125565948_125569143_1	chr8	-	1042	5	ISM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	20716	721	20716	-721	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCCAGTGATGGGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	125569143	125565947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101
ENSMUSG00000031984.9_125566118_125587843_1	chr8	-	1046	6	ISM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	2016	891	2016	-891	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACACCTCTATAGTA	NA	NA	NA	NA	NA	NA	NA	NA	125587843	125566117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684
ENSMUSG00000031984.9_125566167_125587921_1	chr8	-	1075	6	ISM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	1938	940	1938	-940	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTGTCAGCCTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	125587921	125566166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684
ENSMUSG00000031984.9_125566302_125589704_1	chr8	-	1110	7	FSM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	155	1075	155	-1075	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCACGTTGGTCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	125589704	125566301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ENSMUSG00000031984.9_125566362_125589704_1	chr8	-	1050	7	FSM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	155	1135	155	-1135	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGGCCCTGCTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	125589704	125566361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ENSMUSG00000031984.9_125566468_125589859_1	chr8	-	1099	7	FSM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	0	1241	0	-1241	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCAGTGAGTTTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	125589859	125566467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ENSMUSG00000031985.10_125589772_125613518_1	chr8	+	2042	13	ISM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	0	3278	0	-3278	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCCATCCTCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	125589771	125613518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421
ENSMUSG00000031985.10_125589995_125614558_1	chr8	+	1975	15	ISM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	223	2238	223	-2238	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCGCTGGGACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	125589994	125614558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496
ENSMUSG00000031985.10_125597577_125616102_1	chr8	+	1948	15	ISM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	7805	694	7805	-694	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACTTACTCTGCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	125597576	125616102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ENSMUSG00000031985.10_125597621_125616160_1	chr8	+	1962	15	ISM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	7849	636	7849	-636	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTCTGAGCCATGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	125597620	125616160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ENSMUSG00000031985.10_125600069_125616287_1	chr8	+	2015	14	ISM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	10297	509	10297	-509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGGGCAGCAGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	125600068	125616287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ENSMUSG00000031985.10_125600996_125616443_1	chr8	+	1953	13	ISM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	11224	353	11224	-353	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCTCCATGAGGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	125600995	125616443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ENSMUSG00000031985.10_125603692_125616574_1	chr8	+	1959	12	ISM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	13920	222	13920	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCGAACCTGAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	125603691	125616574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ENSMUSG00000031985.10_125605251_125616796_1	chr8	+	2011	10	ISM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	15479	0	15479	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAATGGTCTTATTAAC	NA	NA	NA	NA	NA	NA	NA	NA	125605250	125616796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ENSMUSG00000031987.7_125636202_125640838_1	chr8	-	760	4	ISM	ENSMUSG00000031987.7	ENST00000366641.4	1940	6	34971	168	34971	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGACCTTGATCTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	125640838	125636201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125636240_125636931_125637503_125638479_125638548_125640755
ENSMUSG00000031987.7_125637190_125675045_1	chr8	-	712	5	FSM	ENSMUSG00000031987.7	ENSMUST00000034469.7	3594	5	1018	1864	764	-1156	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAAGGGCCCTTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	125675045	125637189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_125637503_125638479_125638548_125640755_125640893_125642399_125642520_125674971
ENSMUSG00000031987.7_125637232_125675120_1	chr8	-	745	5	FSM	ENSMUSG00000031987.7	ENSMUST00000034469.7	3594	5	943	1906	689	-1198	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGACGCTGTCGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	125675120	125637231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_125637503_125638479_125638548_125640755_125640893_125642399_125642520_125674971
ENSMUSG00000031987.7_125637311_125675198_1	chr8	-	744	5	FSM	ENSMUSG00000031987.7	ENSMUST00000034469.7	3594	5	865	1985	611	-1277	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAGAGGGCTCCATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	125675198	125637310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_125637503_125638479_125638548_125640755_125640893_125642399_125642520_125674971
ENSMUSG00000031987.7_125638478_125675462_1	chr8	-	818	4	ISM	ENSMUSG00000031987.7	ENST00000366641.4	1940	6	347	2444	347	-2444	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCAGCTGGGCGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	125675462	125638477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125638548_125640755_125640893_125642399_125642520_125674971
ENSMUSG00000031987.7_125642444_125675614_1	chr8	-	719	2	ISM	ENSMUSG00000031987.7	ENST00000366641.4	1940	6	195	6410	195	-6410	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGTGACATGTATATATTAT	NA	NA	NA	NA	NA	NA	NA	NA	125675614	125642443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125642520_125674971
ENSMUSG00000031987.7_125642498_125675670_1	chr8	-	721	2	ISM	ENSMUSG00000031987.7	ENST00000366641.4	1940	6	139	6464	139	-6464	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACGGAACAGGCTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	125675670	125642497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125642520_125674971
ENSMUSG00000031988.11_26920558_26921737_1	chr9	-	854	2	ISM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	19624	1491	19624	-1491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGACTCCTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	26921737	26920557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_26921334_26921659
ENSMUSG00000031988.11_26920638_26921767_1	chr9	-	804	2	ISM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	19594	1571	19594	-1571	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGGACCAGACCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	26921767	26920637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_26921334_26921659
ENSMUSG00000031988.11_26920808_26924149_1	chr9	-	798	3	ISM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	17212	1741	17212	-1741	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGGGCTCTGGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	26924149	26920807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_26921334_26921659_26921803_26924020
ENSMUSG00000031988.11_26920910_26926516_1	chr9	-	807	4	ISM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	14845	1843	14845	-1843	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCTCAAGCCTTAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	26926516	26920909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452
ENSMUSG00000031988.11_26921060_26930677_1	chr9	-	822	5	ISM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	10684	1993	10684	-1993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTTTTACTTAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	26930677	26921059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613
ENSMUSG00000031988.11_26921258_26940783_1	chr9	-	806	6	FSM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	578	2191	578	-2191	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGGGCACAACCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	26940783	26921257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
ENSMUSG00000031988.11_26921771_26940964_1	chr9	-	800	5	ISM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	397	2704	397	-2704	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTATGAGCTCACACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	26940964	26921770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
ENSMUSG00000031988.11_26924116_26941106_1	chr9	-	815	4	ISM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	255	5049	255	-5049	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATCAAACGAGAGACAACAG	NA	NA	NA	NA	NA	NA	NA	NA	26941106	26924115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_26924197_26926452_26926618_26930613_26930771_26940694
ENSMUSG00000031988.11_26926512_26941218_1	chr9	-	787	3	ISM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	143	7445	143	-7445	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGAAGTTGGCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	26941218	26926511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_26926618_26930613_26930771_26940694
ENSMUSG00000031988.11_26926575_26941326_1	chr9	-	832	3	ISM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	35	7508	35	-7508	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAGAGATGGACATTGT	NA	NA	NA	NA	NA	NA	NA	NA	26941326	26926574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_26926618_26930613_26930771_26940694
ENSMUSG00000031990.16_27009026_27011398_1	chr9	-	877	4	ISM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	55291	346	55291	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAAGTCTCCTTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	27011398	27009025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378
ENSMUSG00000031990.16_27009093_27011443_1	chr9	-	855	4	ISM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	55246	413	55246	-413	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAACTCTCCTTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	27011443	27009092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378
ENSMUSG00000031990.16_27009383_27013233_1	chr9	-	877	6	ISM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	53456	703	53456	-703	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTTGGACTGTTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	27013233	27009382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159
ENSMUSG00000031990.16_27009506_27016834_1	chr9	-	865	7	ISM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	49855	826	49855	-826	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCACAAGAATAAAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	27016834	27009505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802
ENSMUSG00000031990.16_27009627_27017685_1	chr9	-	867	8	ISM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	49004	947	49004	-947	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAAGCTGGTCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	27017685	27009626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644
ENSMUSG00000031990.16_27010007_27066689_1	chr9	-	925	8	ISM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	0	1327	0	-1327	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGCAGAAACCCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	27066689	27010006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
ENSMUSG00000031996.18_31060853_31089303_1	chr9	-	3421	17	NNC	ENSMUSG00000031996.18	novel	3633	18	NA	NA	33752	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	31089303	31060852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083238_31083343_31088313_31088438_31089200
ENSMUSG00000031996.18_31060853_31089303_2	chr9	-	3226	15	ISM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	33780	0	33752	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	31089303	31060852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200
ENSMUSG00000031996.18_31060853_31089376_1	chr9	-	3493	17	NNC	ENSMUSG00000031996.18	novel	3633	18	NA	NA	33679	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	31089376	31060852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073204_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200
ENSMUSG00000031996.18_31060853_31089376_2	chr9	-	3499	17	NNC	ENSMUSG00000031996.18	novel	3633	18	NA	NA	33679	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	31089376	31060852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067514_31068986_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200
ENSMUSG00000031996.18_31060853_31123087_1	chr9	-	3664	18	NNC	ENSMUSG00000031996.18	novel	3633	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	31123087	31060852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088319_31088438_31089200_31089375_31122918
ENSMUSG00000031996.18_31060853_31123087_2	chr9	-	3665	18	NNC	ENSMUSG00000031996.18	novel	3633	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	31123087	31060852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069139_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUSG00000031996.18_31060853_31123087_3	chr9	-	3664	18	NNC	ENSMUSG00000031996.18	novel	3633	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	31123087	31060852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_31062269_31063138_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUSG00000031996.18_31060853_31123087_4	chr9	-	3664	18	NNC	ENSMUSG00000031996.18	novel	3633	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	31123087	31060852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074711_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUSG00000031996.18_31060853_31123087_5	chr9	-	3669	18	NNC	ENSMUSG00000031996.18	novel	3633	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	31123087	31060852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078857_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUSG00000031996.18_31060853_31123087_6	chr9	-	3670	18	FSM	ENSMUSG00000031996.18	ENST00000650012.1	3633	18	-32	-5	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	31123087	31060852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUSG00000031996.18_31060853_31123087_7	chr9	-	3662	18	NNC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	31123087	31060852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067514_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUSG00000031996.18_31061038_31122967_1	chr9	-	3161	16	FSM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	116	185	88	-180	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTGTTTTGGTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	31122967	31061037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUSG00000031996.18_31061101_31123087_1	chr9	-	3218	16	FSM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	-4	248	0	-243	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCGCTTTGTTGCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	31123087	31061100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUSG00000032002.11_7184715_7207040_1	chr9	+	806	5	FSM	ENSMUSG00000032002.11	ENST00000531543.1	777	5	0	-29	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTCCGTTGAGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	7184714	7207040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_7184883_7203262_7203372_7203450_7203556_7205297_7205401_7206719
ENSMUSG00000032002.11_7184715_7207040_2	chr9	+	799	5	NNC	ENSMUSG00000032002.11	novel	777	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTCCGTTGAGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	7184714	7207040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_7184883_7203262_7203372_7203457_7203556_7205297_7205401_7206719
ENSMUSG00000032002.11_7184827_7189227_1	chr9	+	285	4	ISM	ENSMUSG00000032002.11	ENSMUST00000034499.10	1122	7	276	17813	112	-17784	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTAAAGGGAATGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	7184826	7189227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161
ENSMUSG00000032002.11_7186800_7203319_1	chr9	+	280	4	ISM	ENSMUSG00000032002.11	ENSMUST00000034499.10	1122	7	2249	3721	2085	-3692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATCTCATCTTTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	7186799	7203319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_7186860_7188745_7188817_7189161_7189254_7203262
ENSMUSG00000032002.11_7188776_7203477_1	chr9	+	269	4	ISM	ENSMUSG00000032002.11	ENSMUST00000034499.10	1122	7	4225	3563	4061	-3534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGCGAAGTCTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	7188775	7203477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_7188817_7189161_7189254_7203262_7203372_7203450
ENSMUSG00000032002.11_7189201_7205313_1	chr9	+	283	4	ISM	ENSMUSG00000032002.11	ENSMUST00000215683.2	2421	8	4681	2892	4486	-1698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGAACAAAGATCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	7189200	7205313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_7189254_7203262_7203372_7203450_7203556_7205297
ENSMUSG00000032014.7_43135235_43150715_1	chr9	-	304	3	ISM	ENSMUSG00000032014.7	ENST00000531220.1	733	4	123	1363	123	-1363	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACACCCGCCAGGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	43150715	43135234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_43135375_43136172_43136225_43150603
ENSMUSG00000032018.15_42165424_42167481_1	chr9	-	1749	2	ISM	ENSMUSG00000032018.15	ENSMUST00000169609.2	1677	6	8015	-605	8015	605	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATGTTATAGCACAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	42167481	42165423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_42167094_42167402
ENSMUSG00000032018.15_42165627_42171028_1	chr9	-	1752	4	ISM	ENSMUSG00000032018.15	ENSMUST00000169609.2	1677	6	4468	-402	4468	402	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCTGAGGTACACTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	42171028	42165626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977
ENSMUSG00000032018.15_42165679_42171083_1	chr9	-	1755	4	ISM	ENSMUSG00000032018.15	ENSMUST00000169609.2	1677	6	4413	-350	4413	350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAAGCTGACTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	42171083	42165678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977
ENSMUSG00000032018.15_42165858_42173407_1	chr9	-	1749	5	ISM	ENSMUSG00000032018.15	ENSMUST00000169609.2	1677	6	2089	-171	2089	171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCCTTGCTGGGATC	NA	NA	NA	NA	NA	NA	NA	NA	42173407	42165857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346
ENSMUSG00000032020.16_40923684_40934762_1	chr9	-	2912	4	ISM	ENSMUSG00000032020.16	ENSMUST00000151485.8	2231	14	56040	-2333	56040	-1290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTGGGCTTGGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	40934762	40923683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_40926333_40927893_40928004_40929312_40929420_40934716
ENSMUSG00000032020.16_40924184_40942868_1	chr9	-	2940	8	ISM	ENSMUSG00000032020.16	ENSMUST00000151485.8	2231	14	47934	-1833	47934	-1790	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAATATTTCAGGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	40942868	40924183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_40926333_40927893_40928004_40929312_40929420_40934716_40934862_40937545_40937639_40939312_40939436_40940934_40941056_40942776
ENSMUSG00000032020.16_40924396_40948923_1	chr9	-	2960	9	ISM	ENSMUSG00000032020.16	ENSMUST00000151485.8	2231	14	41879	-1621	41879	1621	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCTGGCAGTAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	40948923	40924395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_40926333_40927893_40928004_40929312_40929420_40934716_40934862_40937545_40937639_40939312_40939436_40940934_40941056_40942776_40942910_40948732
ENSMUSG00000032020.16_40924580_40954910_1	chr9	-	2934	10	ISM	ENSMUSG00000032020.16	ENSMUST00000151485.8	2231	14	35892	-1437	35892	1437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTAATTCTCCAAATT	NA	NA	NA	NA	NA	NA	NA	NA	40954910	40924579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_40926333_40927893_40928004_40929312_40929420_40934716_40934862_40937545_40937639_40939312_40939436_40940934_40941056_40942776_40942910_40948732_40948942_40954770
ENSMUSG00000032020.16_40924729_40958287_1	chr9	-	2926	11	ISM	ENSMUSG00000032020.16	ENSMUST00000151485.8	2231	14	32515	-1288	32515	1288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGGTGTTCAGGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	40958287	40924728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_40926333_40927893_40928004_40929312_40929420_40934716_40934862_40937545_40937639_40939312_40939436_40940934_40941056_40942776_40942910_40948732_40948942_40954770_40954941_40958176
ENSMUSG00000032020.16_40925409_41068916_1	chr9	-	2897	14	FSM	ENSMUSG00000032020.16	ENSMUST00000044155.15	6354	14	442	3015	442	608	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGACGTGTCTTTCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	41068916	40925408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_40926333_40927893_40928004_40929312_40929420_40934716_40934862_40937545_40937639_40939312_40939436_40940934_40941056_40942776_40942910_40948732_40948942_40954770_40954941_40958176_40958376_40961735_40961923_40962612_40962667_41068594
ENSMUSG00000032020.16_40925517_41069047_1	chr9	-	2920	14	FSM	ENSMUSG00000032020.16	ENSMUST00000044155.15	6354	14	311	3123	311	500	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGTGTGTTGAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	41069047	40925516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_40926333_40927893_40928004_40929312_40929420_40934716_40934862_40937545_40937639_40939312_40939436_40940934_40941056_40942776_40942910_40948732_40948942_40954770_40954941_40958176_40958376_40961735_40961923_40962612_40962667_41068594
ENSMUSG00000032020.16_40925610_41069123_1	chr9	-	2903	14	FSM	ENSMUSG00000032020.16	ENSMUST00000044155.15	6354	14	235	3216	235	407	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGAGCAATCTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	41069123	40925609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_40926333_40927893_40928004_40929312_40929420_40934716_40934862_40937545_40937639_40939312_40939436_40940934_40941056_40942776_40942910_40948732_40948942_40954770_40954941_40958176_40958376_40961735_40961923_40962612_40962667_41068594
ENSMUSG00000032024.11_40597469_40685750_1	chr9	+	807	5	ISM	ENSMUSG00000032024.11	ENSMUST00000034522.8	4154	7	161	10865	161	-10865	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGCTGTGTGGTACGGGT	NA	NA	NA	NA	NA	NA	NA	NA	40597468	40685750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40597656_40672196_40672355_40682400_40682603_40683656_40683825_40685658
ENSMUSG00000032024.11_40597575_40692464_1	chr9	+	788	6	ISM	ENSMUSG00000032024.11	ENSMUST00000034522.8	4154	7	267	4151	267	-4151	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCATTTTCCTCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	40597574	40692464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40597656_40672196_40672355_40682400_40682603_40683656_40683825_40685658_40685782_40692408
ENSMUSG00000032024.11_40672260_40693657_1	chr9	+	785	6	ISM	ENSMUSG00000032024.11	ENSMUST00000034522.8	4154	7	74952	2958	74952	-2958	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCCGGAGCTCACGCTC	NA	NA	NA	NA	NA	NA	NA	NA	40672259	40693657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40672355_40682400_40682603_40683656_40683825_40685658_40685782_40692408_40692551_40693602
ENSMUSG00000032024.11_40682400_40693767_1	chr9	+	801	5	ISM	ENSMUSG00000032024.11	ENSMUST00000034522.8	4154	7	85092	2848	85092	-2848	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCGCAGGCATACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	40682399	40693767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40682603_40683656_40683825_40685658_40685782_40692408_40692551_40693602
ENSMUSG00000032024.11_40683670_40694011_1	chr9	+	829	4	ISM	ENSMUSG00000032024.11	ENSMUST00000034522.8	4154	7	86362	2604	86362	-2604	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTAGCTGCAGAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	40683669	40694011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40683825_40685658_40685782_40692408_40692551_40693602
ENSMUSG00000032024.11_40683744_40694062_1	chr9	+	806	4	ISM	ENSMUSG00000032024.11	ENSMUST00000034522.8	4154	7	86436	2553	86436	-2553	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAGGATACCAAACAAACA	NA	NA	NA	NA	NA	NA	NA	NA	40683743	40694062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40683825_40685658_40685782_40692408_40692551_40693602
ENSMUSG00000032026.8_48380186_48386497_1	chr9	-	414	5	ISM	ENSMUSG00000032026.8	ENSMUST00000034524.5	1077	7	5414	374	5382	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAGACAGACGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	48386497	48380185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_48380247_48383119_48383174_48384331_48384441_48385701_48385814_48386419
ENSMUSG00000032026.8_48384356_48390693_1	chr9	-	359	4	ISM	ENSMUSG00000032026.8	ENSMUST00000034524.5	1077	7	1218	4544	1186	1105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACTGTTAAAGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	48390693	48384355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_48384441_48385701_48385814_48386419_48386498_48390609
ENSMUSG00000032030.17_53528324_53537294_1	chr9	-	1824	7	ISM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	41517	0	41513	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTGTGGGTATACG	NA	NA	NA	NA	NA	NA	NA	NA	53537294	53528323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162
ENSMUSG00000032030.17_53528444_53540533_1	chr9	-	1763	8	ISM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	38278	120	38274	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTCTGTTTAGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	53540533	53528443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474
ENSMUSG00000032030.17_53528742_53545378_1	chr9	-	1806	11	ISM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	33433	418	33429	-418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATTCATGCACTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	53545378	53528741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284
ENSMUSG00000032030.17_53528891_53546359_1	chr9	-	1782	12	ISM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	32452	567	32448	-567	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGCCCATTGTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	53546359	53528890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271
ENSMUSG00000032030.17_53529086_53554093_1	chr9	-	1787	14	ISM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	24718	762	24714	-762	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCCTGGGCAGAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	53554093	53529085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980
ENSMUSG00000032030.17_53532505_53558112_1	chr9	-	1838	15	ISM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	20699	4181	20695	-4181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAATGAAGGGATAGT	NA	NA	NA	NA	NA	NA	NA	NA	53558112	53532504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966
ENSMUSG00000032030.17_53535487_53578607_1	chr9	-	1784	14	ISM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	204	7163	200	-7163	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACAAAAATAATAAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	53578607	53535486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ENSMUSG00000032038.8_34957872_35028169_1	chr9	-	2088	11	NNC	ENSMUSG00000032038.8	novel	2095	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGGGGCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35028169	34957871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_34958809_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
ENSMUSG00000032038.8_34957872_35028169_3	chr9	-	2088	11	NNC	ENSMUSG00000032038.8	novel	2095	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGGGGCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35028169	34957871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964757_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
ENSMUSG00000032038.8_34957872_35028169_4	chr9	-	2089	11	NNC	ENSMUSG00000032038.8	novel	2095	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGGGGCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35028169	34957871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_34958816_34959114_34959259_34963535_34963670_34964369_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
ENSMUSG00000032038.8_34957872_35028169_5	chr9	-	2087	11	NNC	ENSMUSG00000032038.8	novel	2095	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGGGGCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35028169	34957871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964675_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
ENSMUSG00000032038.8_34957872_35028169_6	chr9	-	2085	11	NNC	ENSMUSG00000032038.8	novel	2095	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGGGGCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35028169	34957871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_34958816_34959124_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
ENSMUSG00000032038.8_34957872_35028169_7	chr9	-	2090	11	NNC	ENSMUSG00000032038.8	novel	2095	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGGGGCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35028169	34957871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965820_34965993_34966079_34966493_34966579_34966869_34966946_35027993
ENSMUSG00000032042.12_35122650_35124729_1	chr9	+	669	6	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	199	3581	199	-3581	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGGAACTAGGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	35122649	35124729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678
ENSMUSG00000032042.12_35123643_35125131_1	chr9	+	726	5	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	1192	3179	1192	-3179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGGATTTCAGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	35123642	35125131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042
ENSMUSG00000032042.12_35123745_35125280_1	chr9	+	672	6	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	1294	3030	1294	-3030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGTTCCAAGAGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	35123744	35125280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232
ENSMUSG00000032042.12_35124138_35125882_1	chr9	+	672	7	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	1687	2428	1687	-2428	internal_fragment	TRUE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGGAATCTCTAGTACAG	NA	NA	NA	NA	NA	NA	NA	NA	35124137	35125882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855
ENSMUSG00000032042.12_35124558_35126136_1	chr9	+	670	7	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	2107	2174	2107	-2174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTAGTGTCCTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	35124557	35126136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113
ENSMUSG00000032042.12_35124752_35126249_1	chr9	+	685	6	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	2301	2061	2301	-2061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTACGATGGTGCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	35124751	35126249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113
ENSMUSG00000032042.12_35124805_35126305_1	chr9	+	688	6	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	2354	2005	2354	-2005	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGGAAGCCATTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	35124804	35126305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113
ENSMUSG00000032042.12_35125098_35126799_1	chr9	+	664	6	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	2647	1511	2647	-1511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGCCGCATGCAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	35125097	35126799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762
ENSMUSG00000032042.12_35125230_35126926_1	chr9	+	760	5	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	2779	1384	2779	-1384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAGGGTTTGGGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	35125229	35126926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762
ENSMUSG00000032042.12_35125477_35127109_1	chr9	+	743	5	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	3026	1201	3026	-1201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAGTGGATGACTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	35125476	35127109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010
ENSMUSG00000032042.12_35125912_35127316_1	chr9	+	677	5	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	3461	994	3461	-994	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTTAATGCCAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	35125911	35127316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ENSMUSG00000032042.12_35125956_35127373_1	chr9	+	690	5	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	3505	937	3505	-937	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATACCAAATCGCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	35125955	35127373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ENSMUSG00000032042.12_35126195_35127548_1	chr9	+	711	4	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	3744	762	3744	-762	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCTAATCATGTTACAAT	NA	NA	NA	NA	NA	NA	NA	NA	35126194	35127548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35126328_35126762_35126927_35127010_35127110_35127233
ENSMUSG00000032042.12_35126195_35127599_1	chr9	+	762	4	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	3744	711	3744	-711	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATCCCCTTCACTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	35126194	35127599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35126328_35126762_35126927_35127010_35127110_35127233
ENSMUSG00000032042.12_35126862_35127740_1	chr9	+	671	3	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	4411	570	4411	-570	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTAATTCCAGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	35126861	35127740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35126927_35127010_35127110_35127233
ENSMUSG00000032042.12_35127042_35127845_1	chr9	+	680	2	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	4591	465	4591	-465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGGCCCATTCTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	35127041	35127845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35127110_35127233
ENSMUSG00000032042.12_35127083_35127905_1	chr9	+	699	2	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	4632	405	4632	-405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCCCCAAAGCATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	35127082	35127905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35127110_35127233
ENSMUSG00000032044.5_35179161_35186674_1	chr9	+	1234	7	FSM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	0	587	0	-587	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAAGAACCAGGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	35179160	35186674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
ENSMUSG00000032044.5_35179273_35186720_1	chr9	+	1168	7	FSM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	112	541	112	-541	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTTTTAATGGAGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	35179272	35186720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
ENSMUSG00000032044.5_35179321_35186778_1	chr9	+	1178	7	FSM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	160	483	160	-483	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGGAAGACTCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	35179320	35186778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
ENSMUSG00000032044.5_35179812_35186939_1	chr9	+	1171	6	ISM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	651	322	651	-322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGGCTTGGATGAACA	NA	NA	NA	NA	NA	NA	NA	NA	35179811	35186939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35179864_35181260_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
ENSMUSG00000032044.5_35181313_35187070_1	chr9	+	1198	5	ISM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	2152	191	2152	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTGGCAGGGCGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	35181312	35187070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
ENSMUSG00000032044.5_35181380_35187108_1	chr9	+	1169	5	ISM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	2219	153	2219	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAAAAGCAAACTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	35181379	35187108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
ENSMUSG00000032044.5_35183839_35187261_1	chr9	+	1230	4	ISM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	4678	0	4678	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAATTTTTTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	35183838	35187261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_35183924_35183997_35184143_35184763_35184862_35186359
ENSMUSG00000032046.16_150674413_150746567_3	chr2	-	1905	13	FSM	ENSMUSG00000032046.16	ENSMUST00000056149.15	1999	13	94	0	94	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGAATCAGAGTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	150746567	150674412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
ENSMUSG00000032046.16_150674413_150746567_4	chr2	-	1901	13	NNC	ENSMUSG00000032046.16	novel	1999	13	NA	NA	94	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGAATCAGAGTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	150746567	150674412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684204_150685306_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
ENSMUSG00000032046.16_150674413_150746568_4	chr2	-	1901	13	NNC	ENSMUSG00000032046.16	novel	1999	13	NA	NA	93	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGAATCAGAGTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	150746568	150674412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690276_150690378_150700279_150700405_150746276
ENSMUSG00000032047.6_53493551_53494801_1	chr9	-	480	2	ISM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	26881	1729	26881	-1729	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATCCCAGCACTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	53494801	53493550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53493966_53494736
ENSMUSG00000032047.6_53493623_53494845_1	chr9	-	452	2	ISM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	26837	1801	26837	-1801	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACCAATATAGGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	53494845	53493622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53493966_53494736
ENSMUSG00000032047.6_53493682_53494896_1	chr9	-	444	2	ISM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	26786	1860	26786	-1860	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTATTTTATTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	53494896	53493681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53493966_53494736
ENSMUSG00000032047.6_53494874_53503315_1	chr9	-	495	6	ISM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	18367	3052	18367	-3052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAGACATTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	53503315	53494873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53494895_53496139_53496205_53498752_53498867_53500477_53500574_53502606_53502758_53503267
ENSMUSG00000032047.6_53498818_53505739_1	chr9	-	474	5	ISM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	15943	6996	15943	-6996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTCTCATGACTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	53505739	53498817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53498867_53500477_53500574_53502606_53502758_53503267_53503412_53505705
ENSMUSG00000032047.6_53500521_53506030_1	chr9	-	486	5	ISM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	15652	8699	15652	-8699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAGTGCCAAAGCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	53506030	53500520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53500574_53502606_53502758_53503267_53503412_53505705_53505807_53505993
ENSMUSG00000032047.6_53502634_53506608_1	chr9	-	491	5	ISM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	15074	10812	15074	-10812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCCCATCACCATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	53506608	53502633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53502758_53503267_53503412_53505705_53505807_53505993_53506090_53506582
ENSMUSG00000032047.6_53502694_53506655_1	chr9	-	478	5	ISM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	15027	10872	15027	-10872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCAGCTCTTACACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	53506655	53502693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53502758_53503267_53503412_53505705_53505807_53505993_53506090_53506582
ENSMUSG00000032050.19_51959571_51996465_1	chr9	+	1629	13	ISM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	156	3564	0	-1182	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTCCACCTCCCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	51959570	51996465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402
ENSMUSG00000032050.19_51972163_52014311_1	chr9	+	1098	8	FSM	ENSMUSG00000032050.19	ENST00000528900.5	1515	8	15	402	15	-402	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCCTTTCCTAGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	51972162	52014311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_51972204_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614_51997776_52011670_52011764_52014136
ENSMUSG00000032050.19_51976217_51997651_1	chr9	+	1471	11	ISM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	16802	2378	51	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAGAAGACACAGAACGAT	NA	NA	NA	NA	NA	NA	NA	NA	51976216	51997651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ENSMUSG00000032050.19_51977055_52011763_1	chr9	+	1539	11	ISM	ENSMUSG00000032050.19	ENST00000647231.1	2462	15	4907	2950	889	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAAAGCTGGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	51977054	52011763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614_51997776_52011670
ENSMUSG00000032050.19_51977066_51996435_1	chr9	+	1064	9	ISM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	17651	3594	900	-1212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGAGCTAAAAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	51977065	51996435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402
ENSMUSG00000032050.19_51977114_51996490_1	chr9	+	1071	9	ISM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	17699	3539	948	-1157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCCCTCCCACGGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	51977113	51996490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402
ENSMUSG00000032050.19_51977167_51996539_1	chr9	+	1067	9	ISM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	17752	3490	1001	-1108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCCAGCGCCGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	51977166	51996539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402
ENSMUSG00000032050.19_51978660_51996645_1	chr9	+	1121	8	ISM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	19245	3384	2494	-1002	internal_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGATGGCTGAGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	51978659	51996645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402
ENSMUSG00000032050.19_51979428_51997651_1	chr9	+	1075	8	ISM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	20013	2378	3262	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAGAAGACACAGAACGAT	NA	NA	NA	NA	NA	NA	NA	NA	51979427	51997651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ENSMUSG00000032050.19_51984552_52014447_1	chr9	+	1095	7	ISM	ENSMUSG00000032050.19	ENST00000528900.5	1515	8	12404	266	8386	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAAAGCCCCTGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	51984551	52014447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614_51997776_52011670_52011764_52014136
ENSMUSG00000032050.19_51992407_52014569_1	chr9	+	1096	6	ISM	ENSMUSG00000032050.19	ENST00000528900.5	1515	8	20259	144	16241	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCGACTTAGAGAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	51992406	52014569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_51992480_51993742_51993836_51996402_51996646_51997614_51997776_52011670_52011764_52014136
ENSMUSG00000032050.19_51992459_52014619_1	chr9	+	1094	6	ISM	ENSMUSG00000032050.19	ENST00000528900.5	1515	8	20311	94	16293	-94	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTGGAATCTGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	51992458	52014619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_51992480_51993742_51993836_51996402_51996646_51997614_51997776_52011670_52011764_52014136
ENSMUSG00000032051.10_51854606_51874846_1	chr9	-	869	4	NNC	ENSMUSG00000032051.10	novel	875	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGTGTGTTTGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	51874846	51854605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_51854944_51859876_51860007_51868372_51868498_51874570
ENSMUSG00000032051.10_51854606_51874846_2	chr9	-	870	4	NNC	ENSMUSG00000032051.10	novel	875	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGTGTGTTTGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	51874846	51854605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_51854950_51859876_51860007_51868377_51868498_51874570
ENSMUSG00000032051.10_51854606_51874846_3	chr9	-	870	4	NNC	ENSMUSG00000032051.10	novel	875	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGTGTGTTTGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	51874846	51854605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_51854950_51859876_51860007_51868372_51868493_51874570
ENSMUSG00000032058.15_50768279_50781500_1	chr9	+	1308	10	ISM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	42	11231	13	-9734	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTGAGTACATGCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	50768278	50781500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362
ENSMUSG00000032058.15_50769131_50784991_1	chr9	+	1274	10	ISM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	894	7740	865	-6243	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGTGGATCATGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	50769130	50784991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946
ENSMUSG00000032058.15_50770148_50789492_1	chr9	+	1352	10	ISM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	1911	3239	1882	-1742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTACATGTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	50770147	50789492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337
ENSMUSG00000032058.15_50772998_50790553_1	chr9	+	1268	11	ISM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	4761	2178	4732	-681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACGAAGACATGGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	50772997	50790553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509
ENSMUSG00000032058.15_50773666_50791234_1	chr9	+	1346	11	ISM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	5429	1497	5400	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGAAACCTTCAAGATC	NA	NA	NA	NA	NA	NA	NA	NA	50773665	50791234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ENSMUSG00000032058.15_50777742_50791387_1	chr9	+	1353	10	ISM	ENSMUSG00000032058.15	ENSMUST00000175640.8	1523	13	9476	-153	9476	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCCTCATACAGTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	50777741	50791387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ENSMUSG00000032058.15_50778961_50791707_1	chr9	+	1331	7	ISM	ENSMUSG00000032058.15	ENSMUST00000175640.8	1523	13	10695	-473	10695	320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGATGTGGAAGGCTAACG	NA	NA	NA	NA	NA	NA	NA	NA	50778960	50791707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ENSMUSG00000032058.15_50781384_50791841_1	chr9	+	1307	6	ISM	ENSMUSG00000032058.15	ENSMUST00000175645.8	1931	14	13127	-454	13118	454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGCACTGTGACTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	50781383	50791841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ENSMUSG00000032058.15_50789385_50792103_1	chr9	+	1308	4	ISM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	21148	628	21119	-628	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATGTCCAGAAATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	50789384	50792103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_50789493_50789997_50790141_50790509_50790602_50791138
ENSMUSG00000032058.15_50790107_50792315_1	chr9	+	1303	3	ISM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	21870	416	21841	-416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATATTTTCATCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	50790106	50792315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_50790141_50790509_50790602_50791138
ENSMUSG00000032059.14_50686451_50700914_1	chr9	+	917	6	ISM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	132	53914	132	-53914	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGTGCAGCTCTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	50686450	50700914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796
ENSMUSG00000032059.14_50733895_50754828_1	chr9	+	916	2	ISM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	47576	0	47576	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTAAGATTTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	50733894	50754828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_50734016_50754033
ENSMUSG00000032060.11_50662625_50665934_1	chr9	+	772	3	ISM	ENSMUSG00000032060.11	ENSMUST00000217475.2	1117	4	0	2002	0	-1909	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGACCTCTCCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	50662624	50665934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_50662877_50664380_50664778_50665811
ENSMUSG00000032060.11_50662750_50667659_1	chr9	+	715	4	FSM	ENSMUSG00000032060.11	ENSMUST00000217475.2	1117	4	125	277	125	-184	multi-exon	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCACTTCATCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	50662749	50667659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_50662877_50664380_50664778_50665811_50665935_50667591
ENSMUSG00000032060.11_50662800_50667672_1	chr9	+	678	4	FSM	ENSMUSG00000032060.11	ENSMUST00000217475.2	1117	4	175	264	175	-171	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTCATCTGATGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	50662799	50667672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_50662877_50664380_50664778_50665811_50665935_50667591
ENSMUSG00000032060.11_50662845_50667728_1	chr9	+	689	4	FSM	ENSMUSG00000032060.11	ENSMUST00000217475.2	1117	4	220	208	220	-115	multi-exon	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGCGCACCATTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	50662844	50667728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_50662877_50664380_50664778_50665811_50665935_50667591
ENSMUSG00000032060.11_50664320_50667659_1	chr9	+	559	4	FSM	ENSMUSG00000032060.11	ENSMUST00000216755.2	836	4	0	277	0	-184	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCACTTCATCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	50664319	50667659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_50664396_50664485_50664778_50665811_50665935_50667591
ENSMUSG00000032060.11_50664320_50667843_1	chr9	+	833	3	FSM	ENSMUSG00000032060.11	ENSMUST00000034562.9	946	3	113	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATTGAAAATCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	50664319	50667843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_50664778_50665811_50665935_50667591
ENSMUSG00000032067.7_50432917_50438252_1	chr9	-	931	4	NIC	ENSMUSG00000032067.7	novel	1046	6	NA	NA	1647	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTTTTCAGGATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	50438252	50432916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_-_50433637_50433828_50433900_50436022_50436080_50438169
ENSMUSG00000032067.7_50433494_50438252_1	chr9	-	292	3	NNC	ENSMUSG00000032067.7	novel	329	4	NA	NA	1647	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGCACATTTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	50438252	50433493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_50433637_50433833_50433900_50438169
ENSMUSG00000032076.21_47721376_47759484_1	chr9	+	343	4	ISM	ENSMUSG00000032076.21	ENSMUST00000114547.8	4444	10	279821	5194	279705	-2204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACCATTGGGGCAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	47721375	47759484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_47721442_47725070_47725244_47730031_47730116_47759464
ENSMUSG00000032077.6_46194423_46203440_1	chr9	+	1536	8	ISM	ENSMUSG00000032077.6	ENSMUST00000074957.5	2539	10	117	6968	117	-6968	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATGATGAAGATCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	46194422	46203440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_46194472_46197640_46197732_46198314_46198400_46198959_46199734_46201423_46201642_46202605_46202709_46202992_46203132_46203363
ENSMUSG00000032077.6_46198314_46203827_1	chr9	+	1587	7	ISM	ENSMUSG00000032077.6	ENSMUST00000074957.5	2539	10	4008	6581	4008	-6581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCTATTTCCTATATT	NA	NA	NA	NA	NA	NA	NA	NA	46198313	46203827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_46198400_46198959_46199734_46201423_46201642_46202605_46202709_46202992_46203132_46203363_46203549_46203745
ENSMUSG00000032077.6_46199545_46210408_1	chr9	+	1612	7	ISM	ENSMUSG00000032077.6	ENSMUST00000074957.5	2539	10	5239	0	5239	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGGCTCAGATGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	46199544	46210408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_46199734_46201423_46201642_46202605_46202709_46202992_46203132_46203363_46203549_46203745_46203828_46209712
ENSMUSG00000032077.6_46199680_46210408_1	chr9	+	1477	7	ISM	ENSMUSG00000032077.6	ENSMUST00000074957.5	2539	10	5374	0	5374	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGGCTCAGATGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	46199679	46210408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_46199734_46201423_46201642_46202605_46202709_46202992_46203132_46203363_46203549_46203745_46203828_46209712
ENSMUSG00000032078.18_46184362_46193024_1	chr9	+	2067	14	FSM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	0	917	0	-917	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGAAAAGAAATGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	46184361	46193024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ENSMUSG00000032078.18_46184930_46193273_1	chr9	+	1858	13	ISM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	568	668	568	-668	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGTTCCAGGACAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	46184929	46193273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ENSMUSG00000032078.18_46185394_46193496_1	chr9	+	2033	12	ISM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	1032	445	1032	-445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTGAGGAGGAAGGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	46185393	46193496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ENSMUSG00000032078.18_46186730_46193631_1	chr9	+	1978	10	ISM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	2368	310	2368	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGGATGAAAGAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	46186729	46193631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ENSMUSG00000032078.18_46188090_46193941_1	chr9	+	2031	6	ISM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	3728	0	3728	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGGTACAGCGTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	46188089	46193941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ENSMUSG00000032079.13_46180535_46181481_1	chr9	+	584	2	FSM	ENSMUSG00000032079.13	ENST00000673688.1	1122	2	1	537	1	-229	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCCTTACGCAGAACGC	NA	NA	NA	NA	NA	NA	NA	NA	46180534	46181481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_46180624_46180986
ENSMUSG00000032085.6_45840917_45842961_2	chr9	-	1260	4	ISM	ENSMUSG00000032085.6	ENSMUST00000034590.4	1595	5	4395	0	4395	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATATTAACAATTAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	45842961	45840916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45841814_45842130_45842234_45842597_45842776_45842879
ENSMUSG00000032085.6_45840917_45843071_1	chr9	-	1370	4	ISM	ENSMUSG00000032085.6	ENSMUST00000034590.4	1595	5	4285	0	4285	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATATTAACAATTAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	45843071	45840916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45841814_45842130_45842234_45842597_45842776_45842879
ENSMUSG00000032085.6_45841055_45847171_1	chr9	-	1272	5	FSM	ENSMUSG00000032085.6	ENSMUST00000034590.4	1595	5	185	138	185	-138	multi-exon	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGGAGAGAATACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	45847171	45841054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_45841814_45842130_45842234_45842597_45842776_45842879_45843072_45847131
ENSMUSG00000032085.6_45841179_45847356_1	chr9	-	1333	5	FSM	ENSMUSG00000032085.6	ENSMUST00000034590.4	1595	5	0	262	0	-262	multi-exon	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGCTCACACGTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	45847356	45841178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_45841814_45842130_45842234_45842597_45842776_45842879_45843072_45847131
ENSMUSG00000032086.13_45750393_45767523_1	chr9	+	431	4	ISM	ENSMUSG00000032086.13	ENST00000428381.6	1325	9	67	4096	67	-4096	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGGCCCTCAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	45750392	45767523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_45750587_45764185_45764275_45765924_45766010_45767460
ENSMUSG00000032086.13_45750538_45771365_1	chr9	+	991	9	FSM	ENSMUSG00000032086.13	ENST00000513780.5	1457	9	212	254	212	-254	multi-exon	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGGCGGCAGTGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	45750537	45771365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_45750587_45764185_45764275_45765924_45766142_45767460_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ENSMUSG00000032086.13_45750538_45771422_1	chr9	+	1048	9	FSM	ENSMUSG00000032086.13	ENST00000513780.5	1457	9	212	197	212	-197	multi-exon	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTCCCCAGACAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	45750537	45771422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_45750587_45764185_45764275_45765924_45766142_45767460_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ENSMUSG00000032086.13_45750538_45771488_1	chr9	+	1114	9	FSM	ENSMUSG00000032086.13	ENST00000513780.5	1457	9	212	131	212	-131	multi-exon	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCATGTTGCCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	45750537	45771488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_45750587_45764185_45764275_45765924_45766142_45767460_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ENSMUSG00000032086.13_45764259_45770251_1	chr9	+	445	6	ISM	ENSMUSG00000032086.13	ENST00000428381.6	1325	9	13933	1368	-1665	-1368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGGCAAGCAGGCACGA	NA	NA	NA	NA	NA	NA	NA	NA	45764258	45770251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_45764275_45765924_45766010_45767460_45767524_45768411_45768547_45769697_45769800_45770207
ENSMUSG00000032091.16_45085201_45095611_1	chr9	-	1020	9	ISM	ENSMUSG00000032091.16	ENST00000437212.8	1460	11	19646	50	19646	-50	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGGTCACTGCCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	45095611	45085200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45085306_45086399_45086543_45086756_45086856_45087683_45087851_45089003_45089164_45090700_45090742_45091947_45092050_45094475_45094606_45095538
ENSMUSG00000032091.16_45085241_45094557_1	chr9	-	844	8	ISM	ENSMUSG00000032091.16	ENST00000522307.5	1402	10	20700	90	20700	-90	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCATGGATGCGGCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	45094557	45085240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45085306_45086399_45086543_45086756_45086856_45087683_45087851_45089003_45089164_45090700_45090742_45091947_45092035_45094475
ENSMUSG00000032091.16_45085291_45097150_1	chr9	-	1048	10	ISM	ENSMUSG00000032091.16	ENST00000437212.8	1460	11	18107	140	18107	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGATGTACCATTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	45097150	45085290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45085306_45086399_45086543_45086756_45086856_45087683_45087851_45089003_45089164_45090700_45090742_45091947_45092050_45094475_45094606_45095538_45095692_45097112
ENSMUSG00000032091.16_45086399_45094607_1	chr9	-	828	7	NNC	ENSMUSG00000032091.16	novel	1402	10	NA	NA	20650	-1248	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCCTCCGAAGACCGCA	NA	NA	NA	NA	NA	NA	NA	NA	45094607	45086398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_45086543_45086756_45086856_45087683_45087851_45089003_45089164_45090700_45090742_45091947_45092033_45094475
ENSMUSG00000032091.16_45086399_45097226_1	chr9	-	1110	9	ISM	ENSMUSG00000032091.16	ENST00000437212.8	1460	11	18031	1248	18031	-1248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCCTCCGAAGACCGCA	NA	NA	NA	NA	NA	NA	NA	NA	45097226	45086398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45086543_45086756_45086856_45087683_45087851_45089003_45089164_45090700_45090742_45091947_45092050_45094475_45094606_45095538_45095692_45097112
ENSMUSG00000032091.16_45086474_45095624_1	chr9	-	839	8	ISM	ENSMUSG00000032091.16	ENST00000522307.5	1402	10	19633	1323	19633	-1323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCTACGAAGGGGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	45095624	45086473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45086543_45086756_45086856_45087683_45087851_45089003_45089164_45090700_45090742_45091947_45092035_45094475_45094606_45095538
ENSMUSG00000032091.16_45086500_45115096_1	chr9	-	1044	10	ISM	ENSMUSG00000032091.16	ENST00000437212.8	1460	11	161	1349	161	-1349	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGCACACGGTGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	45115096	45086499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45086543_45086756_45086856_45087683_45087851_45089003_45089164_45090700_45090742_45091947_45092050_45094475_45094606_45095538_45095692_45097112_45097227_45115061
ENSMUSG00000032091.16_45087683_45115160_1	chr9	-	909	7	ISM	ENSMUSG00000032091.16	ENST00000522307.5	1402	10	97	2532	97	-2532	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGGTGGTCCCTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	45115160	45087682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45087851_45089003_45089164_45090700_45090742_45091947_45092035_45094475_45094606_45095538_45095780_45115078
ENSMUSG00000032091.16_45087683_45115284_1	chr9	-	1091	8	ISM	ENSMUSG00000032091.16	ENST00000437212.8	1460	11	-27	2532	-27	-2532	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGGTGGTCCCTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	45115284	45087682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45087851_45089003_45089164_45090700_45090742_45091947_45092050_45094475_45094606_45095538_45095692_45097112_45097227_45115061
ENSMUSG00000032091.16_45087827_45115102_1	chr9	-	750	8	ISM	ENSMUSG00000032091.16	ENST00000522824.5	1445	11	155	2676	155	-2676	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTCAGGGCAGGCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	45115102	45087826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45087851_45089003_45089164_45090700_45090742_45091947_45092035_45094475_45094606_45095538_45095692_45097112_45097227_45115061
ENSMUSG00000032091.16_45088998_45115160_1	chr9	-	790	7	ISM	ENSMUSG00000032091.16	ENST00000522824.5	1445	11	97	3847	97	-3847	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACGAGGAAGCTAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	45115160	45088997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45089164_45090700_45090742_45091947_45092035_45094475_45094606_45095538_45095692_45097112_45097227_45115061
ENSMUSG00000032091.16_45088998_45115284_1	chr9	-	871	6	ISM	ENSMUSG00000032091.16	ENST00000522307.5	1402	10	-27	3847	-27	-3847	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACGAGGAAGCTAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	45115284	45088997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45089164_45090700_45090742_45091947_45092035_45094475_45094606_45095538_45095780_45115078
ENSMUSG00000032096.17_44654609_44656789_1	chr9	-	780	2	ISM	ENSMUSG00000032096.17	ENST00000392859.7	1696	9	22340	-351	22340	351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCTGCCCTTCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	44656789	44654608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44655314_44656714
ENSMUSG00000032096.17_44654708_44656878_1	chr9	-	770	2	ISM	ENSMUSG00000032096.17	ENST00000392859.7	1696	9	22251	-252	22251	252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAAGGGATGTAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	44656878	44654707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44655314_44656714
ENSMUSG00000032096.17_44654818_44661693_1	chr9	-	773	3	ISM	ENSMUSG00000032096.17	ENST00000392859.7	1696	9	17436	-142	17436	142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGTACACTTAGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	44661693	44654817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44655314_44656714_44656920_44661621
ENSMUSG00000032096.17_44654960_44679142_1	chr9	-	1701	9	NNC	ENSMUSG00000032096.17	novel	1696	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1092	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCCCCAGTAAATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	44679142	44654959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_44655314_44656714_44656920_44661621_44661731_44662520_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44678966
ENSMUSG00000032096.17_44654960_44679142_2	chr9	-	1709	9	FSM	ENSMUSG00000032096.17	ENST00000392859.7	1696	9	-13	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCCCCAGTAAATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	44679142	44654959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44678966
ENSMUSG00000032096.17_44662625_44671274_1	chr9	-	769	6	ISM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	7868	9764	7855	-7665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTCTCATTGGCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	44671274	44662624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258
ENSMUSG00000032096.17_44663442_44671389_1	chr9	-	813	5	ISM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	7753	10581	7740	-8482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGAAAATGAAGATAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	44671389	44663441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258
ENSMUSG00000032096.17_44663498_44671409_1	chr9	-	777	5	ISM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	7733	10637	7720	-8538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATGATCATGCTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	44671409	44663497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258
ENSMUSG00000032096.17_44663556_44671459_1	chr9	-	769	5	ISM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	7683	10695	7670	-8596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAAGATCACACTAACC	NA	NA	NA	NA	NA	NA	NA	NA	44671459	44663555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258
ENSMUSG00000032096.17_44668451_44678985_1	chr9	-	800	5	ISM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	157	15590	144	-13491	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGTGCATGCTCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	44678985	44668450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ENSMUSG00000032096.17_44668517_44679095_1	chr9	-	844	5	ISM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	47	15656	34	-13557	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATTGAAATCTGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	44679095	44668516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ENSMUSG00000032096.17_44668570_44679095_1	chr9	-	791	5	ISM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	47	15709	34	-13610	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAAGGCTTTGAAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	44679095	44668569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ENSMUSG00000032105.6_44159546_44161760_1	chr9	-	1281	7	NNC	ENSMUSG00000032105.6	novel	1360	8	NA	NA	390	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGGAGTCTGGAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	44161760	44159545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_44159729_44159852_44160060_44160143_44160341_44160531_44160737_44160958_44161045_44161139_44161330_44161547
ENSMUSG00000032105.6_44159581_44162045_1	chr9	-	1337	8	FSM	ENSMUSG00000032105.6	ENST00000525131.5	1480	8	108	35	105	-35	multi-exon	FALSE	canonical	NA	NA	NA	NA	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTAGGAATCCGCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	44162045	44159580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_44159729_44159852_44160060_44160143_44160341_44160531_44160737_44160907_44161045_44161139_44161330_44161547_44161760_44162004
ENSMUSG00000032105.6_44159625_44162102_1	chr9	-	1350	8	FSM	ENSMUSG00000032105.6	ENST00000525131.5	1480	8	51	79	48	-79	multi-exon	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAACTGACTGAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	44162102	44159624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_44159729_44159852_44160060_44160143_44160341_44160531_44160737_44160907_44161045_44161139_44161330_44161547_44161760_44162004
ENSMUSG00000032105.6_44159629_44162126_1	chr9	-	1253	8	FSM	ENSMUSG00000032105.6	ENST00000322712.4	1360	8	24	83	24	-83	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCAGCAACTGACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	44162126	44159628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_44159729_44159852_44160060_44160143_44160341_44160531_44160737_44160949_44161045_44161139_44161330_44161547_44161760_44162079
ENSMUSG00000032105.6_44159679_44162150_1	chr9	-	1344	8	FSM	ENSMUSG00000032105.6	ENST00000525131.5	1480	8	3	133	0	-133	multi-exon	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGGAGGTGAACGGAT	NA	NA	NA	NA	NA	NA	NA	NA	44162150	44159678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_44159729_44159852_44160060_44160143_44160341_44160531_44160737_44160907_44161045_44161139_44161330_44161547_44161760_44162004
ENSMUSG00000032112.11_44315361_44316588_1	chr9	-	211	3	ISM	ENSMUSG00000032112.11	ENST00000434101.6	758	5	2015	299	2015	-299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGTGGCAGAGAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	44316588	44315360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44315396_44315630_44315758_44316539
ENSMUSG00000032112.11_44315648_44318118_1	chr9	-	232	3	ISM	ENSMUSG00000032112.11	ENSMUST00000217163.2	1185	4	511	590	485	-586	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAATGCCTATCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	44318118	44315647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44315758_44316539_44316644_44318100
ENSMUSG00000032112.11_44315667_44318501_1	chr9	-	286	4	ISM	ENSMUSG00000032112.11	ENST00000434101.6	758	5	102	605	102	-605	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAATCCATTCTACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	44318501	44315666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44315758_44316539_44316589_44318207_44318276_44318423
ENSMUSG00000032112.11_44315715_44318157_1	chr9	-	204	3	ISM	ENSMUSG00000032112.11	ENSMUST00000217163.2	1185	4	472	657	446	-653	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCTCTTCTCCGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	44318157	44315714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44315758_44316539_44316644_44318100
ENSMUSG00000032113.17_36620153_36624680_1	chr9	-	1740	3	ISM	ENSMUSG00000032113.17	ENSMUST00000172702.9	3797	12	12990	375	12479	-375	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTATGTATACTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	36624680	36620152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36621727_36623337_36623440_36624616
ENSMUSG00000032113.17_36620736_36630874_1	chr9	-	1788	8	ISM	ENSMUSG00000032113.17	ENSMUST00000172702.9	3797	12	6796	958	6285	717	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGGGTCCTGTATTCC	NA	NA	NA	NA	NA	NA	NA	NA	36630874	36620735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799
ENSMUSG00000032113.17_36621076_36635174_1	chr9	-	1779	11	ISM	ENSMUSG00000032113.17	ENSMUST00000172702.9	3797	12	2496	1298	1985	377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGGCGTAGCTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	36635174	36621075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092
ENSMUSG00000032113.17_36621163_36635229_1	chr9	-	1747	11	ISM	ENSMUSG00000032113.17	ENSMUST00000172702.9	3797	12	2441	1385	1930	290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCAGTTTGGGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	36635229	36621162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092
ENSMUSG00000032113.17_36621453_36637901_1	chr9	-	1669	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	53	1675	53	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATGTAATGCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	36637901	36621452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
ENSMUSG00000032113.17_36621668_36629682_1	chr9	-	732	7	ISM	ENSMUSG00000032113.17	ENST00000427383.6	1490	12	8297	182	7477	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGCAGCCAGAAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	36629682	36621667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626
ENSMUSG00000032113.17_36623337_36630874_1	chr9	-	798	7	ISM	ENSMUSG00000032113.17	ENST00000427383.6	1490	12	7105	1851	6285	-1851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCATAGATTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	36630874	36623336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799
ENSMUSG00000032113.17_36625721_36637866_1	chr9	-	724	8	ISM	ENSMUSG00000032113.17	ENST00000427383.6	1490	12	113	4235	88	-4235	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGACTTACAAAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	36637866	36625720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36637092_36637175_36637858
ENSMUSG00000032115.15_44291826_44302609_1	chr9	+	3067	24	FSM	ENSMUSG00000032115.15	ENST00000621959.4	3063	24	17	-21	17	21	multi-exon	TRUE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGTGAGAGAATGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	44291825	44302609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ENSMUSG00000032116.19_36643611_36645633_1	chr9	-	671	2	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	33342	2971	33272	-2971	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAAGTTGCTGAGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	36645633	36643610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36644259_36645610
ENSMUSG00000032116.19_36643883_36652805_1	chr9	-	702	4	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	26170	3243	26100	-3243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGATAGGAGCATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	36652805	36643882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784
ENSMUSG00000032116.19_36644021_36653033_1	chr9	-	670	5	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	25942	3381	25872	-3381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTACTTTGGTCAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	36653033	36644020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009
ENSMUSG00000032116.19_36644066_36653098_1	chr9	-	690	5	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	25877	3426	25807	-3426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTTTTATAATTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	36653098	36644065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009
ENSMUSG00000032116.19_36644169_36654776_1	chr9	-	680	6	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	24199	3529	24129	-3529	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGCTGAAGATGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	36654776	36644168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711
ENSMUSG00000032116.19_36644235_36654827_1	chr9	-	665	6	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	24148	3595	24078	-3595	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTCAAGGACATAAACGTC	NA	NA	NA	NA	NA	NA	NA	NA	36654827	36644234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711
ENSMUSG00000032116.19_36645675_36655327_1	chr9	-	686	6	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	23648	5035	23578	-5035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGCTTGATGTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	36655327	36645674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291
ENSMUSG00000032116.19_36646649_36655447_1	chr9	-	754	5	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	23528	6009	23458	-6009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGTGATTCATAATGC	NA	NA	NA	NA	NA	NA	NA	NA	36655447	36646648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291
ENSMUSG00000032116.19_36646772_36657906_1	chr9	-	688	6	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	21069	6132	20999	-6132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGACTACTATACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	36657906	36646771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849
ENSMUSG00000032116.19_36652785_36659243_1	chr9	-	680	6	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	19732	12145	19662	-12145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGTACTTGATACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	36659243	36652784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220
ENSMUSG00000032116.19_36652867_36659376_1	chr9	-	731	6	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	19599	12227	19529	-12227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCCTATGAAATCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	36659376	36652866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220
ENSMUSG00000032116.19_36653043_36660896_1	chr9	-	725	6	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	18079	12403	18009	-12403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATAATACCCATATTTC	NA	NA	NA	NA	NA	NA	NA	NA	36660896	36653042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848
ENSMUSG00000032116.19_36654846_36662526_1	chr9	-	689	6	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	16449	14206	16379	11310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGACTTGGGTGACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	36662526	36654845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477
ENSMUSG00000032116.19_36655376_36663660_1	chr9	-	701	6	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	15315	14736	15245	10780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATATATGAAAAATCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	36663660	36655375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625
ENSMUSG00000032116.19_36659321_36670082_1	chr9	-	665	6	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	8893	18681	8823	6835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATAACATTCCCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	36670082	36659320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017
ENSMUSG00000032116.19_36659360_36670153_1	chr9	-	697	6	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	8822	18720	8752	6796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGCGTTTCTACTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	36670153	36659359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017
ENSMUSG00000032116.19_36660914_36670572_1	chr9	-	699	6	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	8403	20274	8333	5242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGAGTGTTATCTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	36670572	36660913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498
ENSMUSG00000032116.19_36660914_36670620_1	chr9	-	747	6	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	8355	20274	8285	5242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGAGTGTTATCTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	36670620	36660913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498
ENSMUSG00000032116.19_36662556_36676429_1	chr9	-	694	7	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	2546	21916	2476	3600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATCTACGTAGCCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	36676429	36662555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349
ENSMUSG00000032116.19_36663626_36678870_1	chr9	-	679	7	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	105	22986	35	2530	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACTTTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	36678870	36663625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ENSMUSG00000032116.19_36666156_36678975_1	chr9	-	623	6	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	0	25516	0	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGTTCCTGGGTATATT	NA	NA	NA	NA	NA	NA	NA	NA	36678975	36666155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ENSMUSG00000032120.12_44220639_44227926_1	chr9	-	2402	11	ISM	ENSMUSG00000032120.12	ENST00000336702.7	3436	15	3614	0	3614	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATATCTCTATCTGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	44227926	44220638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44220702_44221458_44222565_44224802_44225089_44225174_44225312_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807
ENSMUSG00000032120.12_44220680_44228051_1	chr9	-	2406	12	ISM	ENSMUSG00000032120.12	ENST00000336702.7	3436	15	3489	41	3489	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAATGCAGGACCAATAG	NA	NA	NA	NA	NA	NA	NA	NA	44228051	44220679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44220702_44221458_44222565_44224802_44225089_44225174_44225312_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004
ENSMUSG00000032120.12_44221508_44228416_1	chr9	-	2516	12	ISM	ENSMUSG00000032120.12	ENSMUST00000065080.10	4337	14	3166	974	3124	-869	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAGTGGCTGGTTATCCT	NA	NA	NA	NA	NA	NA	NA	NA	44228416	44221507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44222565_44224802_44225089_44225174_44225309_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296
ENSMUSG00000032120.12_44221663_44228963_1	chr9	-	2445	13	ISM	ENSMUSG00000032120.12	ENSMUST00000065080.10	4337	14	2619	1129	2577	-1024	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTTCCCTAGAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	44228963	44221662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44222565_44224802_44225089_44225174_44225309_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879
ENSMUSG00000032120.12_44221799_44230932_1	chr9	-	2422	14	FSM	ENSMUSG00000032120.12	ENSMUST00000065080.10	4337	14	650	1265	608	-1160	multi-exon	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGCAGGCACTCCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	44230932	44221798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_44222565_44224802_44225089_44225174_44225309_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
ENSMUSG00000032121.10_37129561_37134223_1	chr9	+	744	4	NNC	ENSMUSG00000032121.10	novel	746	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTTTGGGCTTTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	37129560	37134223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_37129673_37130284_37130367_37130499_37130601_37133774
ENSMUSG00000032121.10_37129561_37134223_2	chr9	+	746	4	FSM	ENSMUSG00000032121.10	ENST00000528724.5	746	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTTTGGGCTTTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	37129560	37134223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_37129673_37130284_37130367_37130497_37130601_37133774
ENSMUSG00000032121.10_37129633_37133825_1	chr9	+	147	3	FSM	ENSMUSG00000032121.10	ENST00000529609.5	291	3	72	72	72	-72	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTTCTTGGAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	37129632	37133825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_37129673_37130544_37130601_37133774
ENSMUSG00000032123.6_44238170_44244525_1	chr9	+	1411	9	NNC	ENSMUSG00000032123.6	novel	1324	9	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTCAGCTTCTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	44238169	44244525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_44238503_44238849_44238970_44239342_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ENSMUSG00000032123.6_44238170_44244525_2	chr9	+	1412	9	FSM	ENSMUSG00000032123.6	ENST00000639704.1	1324	9	-88	0	28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTCAGCTTCTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	44238169	44244525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_44238503_44238848_44238970_44239342_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ENSMUSG00000032123.6_44238170_44244525_3	chr9	+	1411	9	NNC	ENSMUSG00000032123.6	novel	1324	9	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTCAGCTTCTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	44238169	44244525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_44238503_44238848_44238970_44239342_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243860_44243948_44244112_44244269_44244353
ENSMUSG00000032123.6_44238170_44244525_4	chr9	+	1404	9	NNC	ENSMUSG00000032123.6	novel	1324	9	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTCAGCTTCTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	44238169	44244525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_44238503_44238848_44238970_44239342_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244361
ENSMUSG00000032123.6_44238329_44243947_1	chr9	+	1018	7	ISM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	187	1250	71	-578	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACAAGGTAACAGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	44238328	44243947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859
ENSMUSG00000032123.6_44238482_44244155_1	chr9	+	908	8	ISM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	340	1042	224	-370	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGACGGTGCCTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	44238481	44244155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112
ENSMUSG00000032123.6_44240347_44244644_1	chr9	+	897	6	ISM	ENSMUSG00000032123.6	ENST00000639704.1	1324	9	2089	-119	2089	119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATCTGCAGCCTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	44240346	44244644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ENSMUSG00000032123.6_44240372_44244733_1	chr9	+	961	6	ISM	ENSMUSG00000032123.6	ENST00000639704.1	1324	9	2114	-208	2114	208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTGAGCCTTGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	44240371	44244733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ENSMUSG00000032123.6_44243279_44244917_1	chr9	+	919	4	ISM	ENSMUSG00000032123.6	ENST00000639704.1	1324	9	5021	-392	5021	-280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGTCCTTTTTAACCT	NA	NA	NA	NA	NA	NA	NA	NA	44243278	44244917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44243390_44243859_44243948_44244112_44244269_44244353
ENSMUSG00000032123.6_44243332_44244976_1	chr9	+	925	4	ISM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	5190	221	5074	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTGCTCTACCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	44243331	44244976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44243390_44243859_44243948_44244112_44244269_44244353
ENSMUSG00000032123.6_44243933_44245191_1	chr9	+	1009	3	ISM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	5791	6	5675	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGATCACAGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	44243932	44245191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44243948_44244112_44244269_44244353
ENSMUSG00000032123.6_44244173_44245191_1	chr9	+	934	2	ISM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	6031	6	5915	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGATCACAGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	44244172	44245191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44244269_44244353
ENSMUSG00000032126.17_44247636_44255418_1	chr9	-	1491	14	NNC	ENSMUSG00000032126.17	novel	1605	14	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTTCTGTTGTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	44255418	44247635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252422_44252511_44252562_44252922_44252996_44253314_44253369_44255306
ENSMUSG00000032126.17_44247636_44255418_2	chr9	-	1498	14	FSM	ENSMUSG00000032126.17	ENSMUST00000077353.15	1605	14	107	0	107	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTTCTGTTGTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	44255418	44247635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
ENSMUSG00000032126.17_44247636_44255418_4	chr9	-	1485	13	NNC	ENSMUSG00000032126.17	novel	1605	14	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTTCTGTTGTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	44255418	44247635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248799_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
ENSMUSG00000032126.17_44247636_44255525_1	chr9	-	1599	14	NNC	ENSMUSG00000032126.17	novel	1605	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTTCTGTTGTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	44255525	44247635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248763_44248944_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
ENSMUSG00000032126.17_44247636_44255525_2	chr9	-	1600	14	NNC	ENSMUSG00000032126.17	novel	1605	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTTCTGTTGTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	44255525	44247635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248953_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
ENSMUSG00000032126.17_44247707_44252999_2	chr9	-	1140	11	NNC	ENSMUSG00000032126.17	novel	1140	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTCTTCTGATAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	44252999	44247706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_44248143_44248222_44248310_44248414_44248469_44248953_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922
ENSMUSG00000032126.17_44247707_44252999_3	chr9	-	1145	11	FSM	ENSMUSG00000032126.17	ENST00000544387.5	1140	11	0	-5	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTCTTCTGATAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	44252999	44247706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922
ENSMUSG00000032126.17_44248107_44253357_1	chr9	-	784	12	FSM	ENSMUSG00000032126.17	ENST00000542729.5	1191	12	12	395	12	-389	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATCACTGCCCGTAACAT	NA	NA	NA	NA	NA	NA	NA	NA	44253357	44248106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314
ENSMUSG00000032127.10_44259225_44263933_1	chr9	-	920	3	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	9034	179	9034	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTCGCCCTCAGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	44263933	44259224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44259882_44260199_44260423_44263893
ENSMUSG00000032127.10_44259391_44264019_1	chr9	-	840	3	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	8948	345	8948	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	44264019	44259390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44259882_44260199_44260423_44263893
ENSMUSG00000032127.10_44259595_44264368_1	chr9	-	845	4	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	8599	549	8599	-549	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCCTGCCTCCTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	44264368	44259594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205
ENSMUSG00000032127.10_44259696_44264558_1	chr9	-	831	5	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	8409	650	8409	-650	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATATCCCTGGGCCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	44264558	44259695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511
ENSMUSG00000032127.10_44259842_44265218_1	chr9	-	863	6	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	7749	796	7749	-796	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGCCGAGGGGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	44265218	44259841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133
ENSMUSG00000032127.10_44260318_44265448_1	chr9	-	831	6	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	7519	1272	7519	-1272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTACTCAGAAAGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	44265448	44260317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399
ENSMUSG00000032127.10_44263986_44265764_1	chr9	-	833	6	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	7203	4940	7203	-4940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAGCAGATTGCACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	44265764	44263985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705
ENSMUSG00000032127.10_44264050_44265830_1	chr9	-	835	6	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	7137	5004	7137	-5004	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAACTCCACAGCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	44265830	44264049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705
ENSMUSG00000032127.10_44264261_44266335_1	chr9	-	861	6	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	6632	5215	6632	-5215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGGCTGTGCTCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	44266335	44264260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260
ENSMUSG00000032127.10_44264324_44266385_1	chr9	-	848	6	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	6582	5278	6582	-5278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCCTGTGGGAACAGGC	NA	NA	NA	NA	NA	NA	NA	NA	44266385	44264323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260
ENSMUSG00000032127.10_44264372_44266447_1	chr9	-	862	6	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	6520	5326	6520	-5326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTACCGGCAGGTGATTGC	NA	NA	NA	NA	NA	NA	NA	NA	44266447	44264371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260
ENSMUSG00000032127.10_44264519_44267046_1	chr9	-	869	6	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	5921	5473	5921	-5473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGCTGTGAGTTTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	44267046	44264518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995
ENSMUSG00000032127.10_44264591_44267090_1	chr9	-	841	6	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	5877	5545	5877	-5545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGACAAGGCATTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	44267090	44264590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995
ENSMUSG00000032127.10_44265203_44267603_1	chr9	-	847	6	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	5364	6157	5364	-6157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCAGGGCATCTATGACAC	NA	NA	NA	NA	NA	NA	NA	NA	44267603	44265202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524
ENSMUSG00000032127.10_44265277_44267655_1	chr9	-	825	6	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	5312	6231	5312	-6231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCATCTTTGCCAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	44267655	44265276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524
ENSMUSG00000032127.10_44265518_44269445_1	chr9	-	839	6	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	3522	6472	3522	-6472	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAAGACCCTCATGCACC	NA	NA	NA	NA	NA	NA	NA	NA	44269445	44265517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365
ENSMUSG00000032127.10_44265731_44269613_1	chr9	-	911	5	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	3354	6685	3354	-6685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATCCAGCTAGAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	44269613	44265730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365
ENSMUSG00000032127.10_44266278_44270493_1	chr9	-	831	5	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	2474	7232	2474	-7232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGAATTCATCAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	44270493	44266277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434
ENSMUSG00000032127.10_44266407_44270598_1	chr9	-	807	5	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	2369	7361	2369	-7361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGATGCCCAGCGCATC	NA	NA	NA	NA	NA	NA	NA	NA	44270598	44266406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434
ENSMUSG00000032127.10_44267067_44271195_1	chr9	-	891	6	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	1772	8021	1772	-8021	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCATGCAGTATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	44271195	44267066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135
ENSMUSG00000032127.10_44267650_44272802_1	chr9	-	843	6	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	165	-8604	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTACAGCGCTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	44272802	44267649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271276_44272724
ENSMUSG00000032131.17_44185210_44186343_1	chr9	-	976	2	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	12498	725	12498	-725	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTCTGGGGGGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	44186343	44185209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44186155_44186312
ENSMUSG00000032131.17_44185266_44186395_1	chr9	-	972	2	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	12446	781	12446	-781	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCAATAATGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44186395	44185265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44186155_44186312
ENSMUSG00000032131.17_44185471_44188789_1	chr9	-	997	4	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	10052	986	10052	-986	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATGGAGCAAGGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	44188789	44185470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44186155_44186312_44186432_44186546_44186706_44188754
ENSMUSG00000032131.17_44185551_44188835_1	chr9	-	963	4	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	10006	1066	10006	-1066	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCGCCACACTCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	44188835	44185550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44186155_44186312_44186432_44186546_44186706_44188754
ENSMUSG00000032131.17_44185749_44189379_1	chr9	-	1005	6	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	9462	1264	9462	-1264	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCGTCAAGGCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	44189379	44185748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44186155_44186312_44186432_44186546_44186706_44188754_44188856_44188954_44189124_44189328
ENSMUSG00000032131.17_44185851_44190294_1	chr9	-	977	7	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	8547	1366	8547	-1366	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTGCTGGTGCAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	44190294	44185850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44186155_44186312_44186432_44186546_44186706_44188754_44188856_44188954_44189124_44189328_44189428_44190268
ENSMUSG00000032131.17_44185999_44190637_1	chr9	-	984	8	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	8204	1514	8204	-1514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTCTTCCTTGCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	44190637	44185998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44186155_44186312_44186432_44186546_44186706_44188754_44188856_44188954_44189124_44189328_44189428_44190268_44190412_44190599
ENSMUSG00000032131.17_44186054_44190686_1	chr9	-	978	8	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	8155	1569	8155	-1569	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGAGCTGGATGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	44190686	44186053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44186155_44186312_44186432_44186546_44186706_44188754_44188856_44188954_44189124_44189328_44189428_44190268_44190412_44190599
ENSMUSG00000032131.17_44186134_44190714_1	chr9	-	926	8	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	8127	1649	8127	-1649	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACCATCTATGGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	44190714	44186133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44186155_44186312_44186432_44186546_44186706_44188754_44188856_44188954_44189124_44189328_44189428_44190268_44190412_44190599
ENSMUSG00000032131.17_44186392_44190955_1	chr9	-	950	8	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	7886	1907	7886	-1907	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTCTCCGGCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	44190955	44186391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44186432_44186546_44186706_44188754_44188856_44188954_44189124_44189328_44189428_44190268_44190412_44190599_44190715_44190831
ENSMUSG00000032131.17_44186543_44192524_1	chr9	-	1060	8	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	6317	2058	6317	-2058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTTGGCACCCAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	44192524	44186542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44186706_44188754_44188856_44188954_44189124_44189328_44189428_44190268_44190412_44190599_44190715_44190831_44190956_44192378
ENSMUSG00000032131.17_44188800_44192955_1	chr9	-	1003	9	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	5886	4315	5886	-4315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTATTACTTGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	44192955	44188799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44188856_44188954_44189124_44189328_44189428_44190268_44190412_44190599_44190715_44190831_44190956_44192378_44192525_44192693_44192745_44192855
ENSMUSG00000032131.17_44189006_44193141_1	chr9	-	970	9	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	5700	4521	5700	-4521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATGCTCTTCCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	44193141	44189005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44189124_44189328_44189428_44190268_44190412_44190599_44190715_44190831_44190956_44192378_44192525_44192693_44192745_44192855_44192989_44193100
ENSMUSG00000032131.17_44189064_44193190_1	chr9	-	961	9	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	5651	4579	5651	-4579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGCACATTGGCGATGA	NA	NA	NA	NA	NA	NA	NA	NA	44193190	44189063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44189124_44189328_44189428_44190268_44190412_44190599_44190715_44190831_44190956_44192378_44192525_44192693_44192745_44192855_44192989_44193100
ENSMUSG00000032131.17_44189327_44198530_1	chr9	-	949	9	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	311	4842	311	-4842	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTCAAGCTGAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	44198530	44189326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44189428_44190268_44190412_44190599_44190715_44190831_44190956_44192378_44192525_44192693_44192745_44192855_44192989_44193100_44193219_44198512
ENSMUSG00000032131.17_44189379_44198593_1	chr9	-	960	9	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	248	4894	248	-4894	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGCATCCTCTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	44198593	44189378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44189428_44190268_44190412_44190599_44190715_44190831_44190956_44192378_44192525_44192693_44192745_44192855_44192989_44193100_44193219_44198512
ENSMUSG00000032131.17_44190307_44198694_1	chr9	-	974	8	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	147	5822	147	-5822	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGAGCTCCCTGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	44198694	44190306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44190412_44190599_44190715_44190831_44190956_44192378_44192525_44192693_44192745_44192855_44192989_44193100_44193219_44198512
ENSMUSG00000032131.17_44190357_44198833_1	chr9	-	1063	8	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	8	5872	8	-5872	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGAATGGCCTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	44198833	44190356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44190412_44190599_44190715_44190831_44190956_44192378_44192525_44192693_44192745_44192855_44192989_44193100_44193219_44198512
ENSMUSG00000032131.17_44190600_44199435_1	chr9	-	1022	8	ISM	ENSMUSG00000032131.17	ENST00000619701.5	3572	15	90	6115	90	-6115	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGAGGGCTCCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	44199435	44190599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44190715_44190831_44190956_44192378_44192525_44192693_44192745_44192855_44192989_44193100_44193219_44198512_44198777_44199364
ENSMUSG00000032171.8_20563391_20577881_1	chr9	+	3839	4	NNC	ENSMUSG00000032171.8	novel	3843	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTTGTCAGAGGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	20563390	20577881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_20563494_20566657_20566877_20573593_20573705_20574475
ENSMUSG00000032175.12_21016349_21022335_1	chr9	-	1128	9	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	13102	4	13102	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACAGTCAAAGGCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	21022335	21016348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301
ENSMUSG00000032175.12_21016442_21022355_1	chr9	-	1055	9	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	13082	97	13082	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCCGGCCCACCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	21022355	21016441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301
ENSMUSG00000032175.12_21016560_21022456_1	chr9	-	1118	8	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	12981	215	12981	-215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCACCAGCAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	21022456	21016559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301
ENSMUSG00000032175.12_21016643_21022576_1	chr9	-	1071	9	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	12861	298	12861	-298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCAGATGACCGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	21022576	21016642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540
ENSMUSG00000032175.12_21018779_21022676_1	chr9	-	1143	8	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	12761	2434	12761	-2434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGACAGACACCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	21022676	21018778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540
ENSMUSG00000032175.12_21019159_21025616_1	chr9	-	1155	8	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	9821	2814	9821	-2814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAAGAGCTGGCATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	21025616	21019158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488
ENSMUSG00000032175.12_21019279_21026539_1	chr9	-	1087	9	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	8898	2934	8898	-2934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGCTGCTGGACAACGAC	NA	NA	NA	NA	NA	NA	NA	NA	21026539	21019278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487
ENSMUSG00000032175.12_21020137_21026731_1	chr9	-	1065	9	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	8706	3792	8706	-3792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTACCTGCCAAGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	21026731	21020136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667
ENSMUSG00000032175.12_21020149_21026837_1	chr9	-	1159	9	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	8600	3804	8600	-3804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGCCTCCGAGACTACC	NA	NA	NA	NA	NA	NA	NA	NA	21026837	21020148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667
ENSMUSG00000032175.12_21020584_21026960_1	chr9	-	1094	9	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	8477	4239	8477	-4239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGCTGTACCACGAACATA	NA	NA	NA	NA	NA	NA	NA	NA	21026960	21020583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939
ENSMUSG00000032175.12_21020660_21027003_1	chr9	-	1061	9	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	8434	4315	8434	-4315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCGTGAAGGCCCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	21027003	21020659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939
ENSMUSG00000032175.12_21021460_21027208_1	chr9	-	1085	9	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	8229	5115	8229	-5115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGAAAAAGATCCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	21027208	21021459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130
ENSMUSG00000032175.12_21021838_21027506_1	chr9	-	1123	9	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	7931	5493	7931	-5493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCACCCGCCAGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	21027506	21021837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428
ENSMUSG00000032175.12_21022365_21031654_1	chr9	-	1129	9	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	3783	6020	3783	-6020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCTTCTTGAGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	21031654	21022364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555
ENSMUSG00000032175.12_21022615_21031865_1	chr9	-	1089	9	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	3572	6270	3572	-6270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAGGAGGGTACCAACC	NA	NA	NA	NA	NA	NA	NA	NA	21031865	21022614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798
ENSMUSG00000032175.12_21025488_21031990_1	chr9	-	1153	8	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	3447	9143	3447	-9143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCACTTGTGGGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	21031990	21025487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798
ENSMUSG00000032175.12_21026521_21032753_1	chr9	-	1064	8	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	2684	10176	2684	8234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCATGGTGTTTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	21032753	21026520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21031991_21032680
ENSMUSG00000032175.12_21026555_21032835_1	chr9	-	1112	8	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	2602	10210	2602	8200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGAGCCAGGTGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	21032835	21026554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21031991_21032680
ENSMUSG00000032175.12_21026797_21032961_1	chr9	-	1088	7	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	2476	10452	2476	7958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGAGTGGGAGGCCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	21032961	21026796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21031991_21032680
ENSMUSG00000032175.12_21027162_21035346_1	chr9	-	1072	6	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	91	10817	91	7593	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCACCACTGCTGCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	21035346	21027161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21027327_21027428_21027538_21031555_21031714_21031798_21031991_21032680_21033055_21035272
ENSMUSG00000032175.12_21027219_21035402_1	chr9	-	1071	6	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	35	10874	35	7536	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCGGCTCGCCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	21035402	21027218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21027327_21027428_21027538_21031555_21031714_21031798_21031991_21032680_21033055_21035272
ENSMUSG00000032175.12_21027295_21035439_1	chr9	-	1032	6	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	-2	10950	-2	7460	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAAAGTTCCCCATCACAC	NA	NA	NA	NA	NA	NA	NA	NA	21035439	21027294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21027327_21027428_21027538_21031555_21031714_21031798_21031991_21032680_21033055_21035272
ENSMUSG00000032175.12_21027457_21035821_1	chr9	-	1084	6	ISM	ENSMUSG00000032175.12	ENST00000264818.10	3485	23	2738	11112	-384	7298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTACCGTGGCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	21035821	21027456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21027538_21031555_21031714_21031798_21031991_21032680_21033055_21035272_21035437_21035706
ENSMUSG00000032175.12_21031555_21036278_1	chr9	-	1156	6	ISM	ENSMUSG00000032175.12	ENST00000264818.10	3485	23	2281	15210	-841	3200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATGGTGGCCCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	21036278	21031554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21031714_21031798_21031991_21032680_21033055_21035272_21035437_21035706_21035855_21036159
ENSMUSG00000032175.12_21031667_21038456_1	chr9	-	1080	7	ISM	ENSMUSG00000032175.12	ENST00000264818.10	3485	23	103	15322	103	3088	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGATGGCTATTTCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	21038456	21031666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21031714_21031798_21031991_21032680_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419
ENSMUSG00000032177.18_21093084_21103860_1	chr9	+	311	4	ISM	ENSMUSG00000032177.18	ENST00000293683.9	2294	15	27	18780	27	-18780	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATGTGCCCATCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	21093083	21103860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21093121_21102622_21102815_21103690_21103728_21103815
ENSMUSG00000032177.18_21102668_21106054_1	chr9	+	318	5	ISM	ENSMUSG00000032177.18	ENSMUST00000115458.9	2962	15	7269	16869	-5333	-16586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGGCCCGGGAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	21102667	21106054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106041
ENSMUSG00000032177.18_21102742_21106116_1	chr9	+	306	5	ISM	ENSMUSG00000032177.18	ENSMUST00000115458.9	2962	15	7343	16807	-5259	-16524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTACCGCTCTGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	21102741	21106116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106041
ENSMUSG00000032177.18_21105871_21112536_1	chr9	+	277	4	ISM	ENSMUSG00000032177.18	ENSMUST00000115458.9	2962	15	10472	10387	-2130	-10104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCATCGCCCACGCCGCG	NA	NA	NA	NA	NA	NA	NA	NA	21105870	21112536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21105921_21106041_21106155_21109888_21109983_21112516
ENSMUSG00000032177.18_21106073_21112616_1	chr9	+	276	3	ISM	ENSMUSG00000032177.18	ENSMUST00000115458.9	2962	15	10674	10307	-1928	-10024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCACAGGGCTGAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	21106072	21112616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21106155_21109888_21109983_21112516
ENSMUSG00000032177.18_21112565_21114707_1	chr9	+	272	3	ISM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	4564	8216	4564	-7933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCCCCGTGGACACCAT	NA	NA	NA	NA	NA	NA	NA	NA	21112564	21114707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21112714_21114493_21114593_21114683
ENSMUSG00000032177.18_21114755_21116351_1	chr9	+	280	3	ISM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	6754	6572	6754	-6289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCGACATCTTCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	21114754	21116351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21114849_21115619_21115720_21116265
ENSMUSG00000032177.18_21116277_21117467_1	chr9	+	294	3	ISM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	8276	5456	8276	-5173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTCAGCAATCCCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	21116276	21117467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21116421_21116586_21116710_21117440
ENSMUSG00000032177.18_21116331_21117516_1	chr9	+	289	3	ISM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	8330	5407	8330	-5124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCATCATGGCTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	21116330	21117516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21116421_21116586_21116710_21117440
ENSMUSG00000032177.18_21116385_21117564_1	chr9	+	283	3	ISM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	8384	5359	8384	-5076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGAATGGAGATTAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	21116384	21117564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21116421_21116586_21116710_21117440
ENSMUSG00000032177.18_21116655_21122034_1	chr9	+	283	3	ISM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	8654	889	8654	-606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGATCTCGTCCACCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	21116654	21122034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21116710_21117440_21117624_21121989
ENSMUSG00000032178.15_21279167_21316129_1	chr9	+	3022	20	FSM	ENSMUSG00000032178.15	ENSMUST00000067646.12	3549	20	0	527	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCAGGCTGCCTGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	21279166	21316129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ENSMUSG00000032178.15_21279299_21316303_1	chr9	+	3064	20	FSM	ENSMUSG00000032178.15	ENSMUST00000067646.12	3549	20	132	353	0	-83	multi-exon	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTAGCTGTGTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	21279298	21316303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ENSMUSG00000032178.15_21299050_21313099_1	chr9	+	3450	17	NNC	ENSMUSG00000032178.15	novel	3606	18	NA	NA	-769	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTTGAGTCTTCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	21299049	21313099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305495_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ENSMUSG00000032178.15_21299953_21316617_1	chr9	+	3050	18	ISM	ENSMUSG00000032178.15	ENSMUST00000214758.2	3177	21	11531	-231	134	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCCGCTGAATGTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	21299952	21316617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ENSMUSG00000032178.15_21299982_21316617_1	chr9	+	3015	18	NNC	ENSMUSG00000032178.15	novel	3430	21	NA	NA	163	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCCGCTGAATGTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	21299981	21316617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310717_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ENSMUSG00000032178.15_21314599_21316303_1	chr9	+	634	3	ISM	ENSMUSG00000032178.15	ENSMUST00000213518.2	3513	21	35365	354	14780	-83	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTAGCTGTGTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	21314598	21316303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21314798_21315355_21315479_21315991
ENSMUSG00000032180.12_21418851_21421548_1	chr9	-	1375	4	NNC	ENSMUSG00000032180.12	novel	1378	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	21421548	21418850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_21419688_21420226_21420404_21420545_21420648_21421289
ENSMUSG00000032181.8_75550826_75589376_1	chr9	-	1417	9	NNC	ENSMUSG00000032181.8	novel	1896	11	NA	NA	1882	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAACATAAGTCTGAACC	NA	NA	NA	NA	NA	NA	NA	NA	75589376	75550825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_75551227_75558912_75558994_75568534_75568673_75570474_75570559_75572935_75573047_75576496_75576675_75582626_75582777_75583950_75584094_75589245
ENSMUSG00000032181.8_75550923_75589601_1	chr9	-	1457	10	ISM	ENSMUSG00000032181.8	ENST00000542355.6	1896	11	1657	97	1657	-97	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGAAGCCGAGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75589601	75550922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_75551227_75558912_75558994_75568534_75568673_75570474_75570559_75572935_75573053_75576496_75576675_75582626_75582777_75583950_75584094_75589245_75589462_75589555
ENSMUSG00000032181.8_75551014_75591009_1	chr9	-	1459	11	FSM	ENSMUSG00000032181.8	ENST00000542355.6	1896	11	249	188	249	-188	multi-exon	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGGATGTGCTGAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	75591009	75551013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_75551227_75558912_75558994_75568534_75568673_75570474_75570559_75572935_75573053_75576496_75576675_75582626_75582777_75583950_75584094_75589245_75589462_75589555_75589602_75590916
ENSMUSG00000032181.8_75551069_75591060_1	chr9	-	1455	11	FSM	ENSMUSG00000032181.8	ENST00000542355.6	1896	11	198	243	198	-243	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAATATAGCTTACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	75591060	75551068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_75551227_75558912_75558994_75568534_75568673_75570474_75570559_75572935_75573053_75576496_75576675_75582626_75582777_75583950_75584094_75589245_75589462_75589555_75589602_75590916
ENSMUSG00000032181.8_75551084_75591093_1	chr9	-	1468	11	NNC	ENSMUSG00000032181.8	novel	1896	11	NA	NA	165	-258	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTGTTCCAGCAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	75591093	75551083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_75551227_75558912_75558989_75568534_75568673_75570474_75570559_75572935_75573053_75576496_75576675_75582626_75582777_75583950_75584094_75589245_75589462_75589555_75589602_75590916
ENSMUSG00000032181.8_75551100_75591092_1	chr9	-	1456	11	FSM	ENSMUSG00000032181.8	ENST00000542355.6	1896	11	166	274	166	-274	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGCTTGAGCCTTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	75591092	75551099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_75551227_75558912_75558994_75568534_75568673_75570474_75570559_75572935_75573053_75576496_75576675_75582626_75582777_75583950_75584094_75589245_75589462_75589555_75589602_75590916
ENSMUSG00000032181.8_75551106_75591114_1	chr9	-	1472	11	FSM	ENSMUSG00000032181.8	ENST00000542355.6	1896	11	144	280	144	-280	multi-exon	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGGGCAGCTTGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75591114	75551105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_75551227_75558912_75558994_75568534_75568673_75570474_75570559_75572935_75573053_75576496_75576675_75582626_75582777_75583950_75584094_75589245_75589462_75589555_75589602_75590916
ENSMUSG00000032181.8_75551130_75591153_1	chr9	-	1487	11	FSM	ENSMUSG00000032181.8	ENST00000542355.6	1896	11	105	304	105	-304	multi-exon	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCATCTACAGCAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	75591153	75551129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_75551227_75558912_75558994_75568534_75568673_75570474_75570559_75572935_75573053_75576496_75576675_75582626_75582777_75583950_75584094_75589245_75589462_75589555_75589602_75590916
ENSMUSG00000032181.8_75558913_75591257_1	chr9	-	1494	10	ISM	ENSMUSG00000032181.8	ENST00000542355.6	1896	11	1	8087	1	-8087	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGGCTGGCTGTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	75591257	75558912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_75558994_75568534_75568673_75570474_75570559_75572935_75573053_75576496_75576675_75582626_75582777_75583950_75584094_75589245_75589462_75589555_75589602_75590916
ENSMUSG00000032182.16_21500219_21503476_1	chr9	-	1594	7	ISM	ENSMUSG00000032182.16	ENSMUST00000180365.9	2014	9	630	237	592	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAAGTAGGGACTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	21503476	21500218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356
ENSMUSG00000032182.16_21500399_21504068_1	chr9	-	1697	8	FSM	ENSMUSG00000032182.16	ENSMUST00000034700.15	2174	8	56	421	0	-417	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATGTGAACGCAACACA	NA	NA	NA	NA	NA	NA	NA	NA	21504068	21500398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823
ENSMUSG00000032182.16_21500538_21503488_1	chr9	-	1211	8	ISM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	580	560	580	-556	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTCTAGGGTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	21503488	21500537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356
ENSMUSG00000032184.6_75533244_75545053_1	chr9	+	968	3	FSM	ENSMUSG00000032184.6	ENSMUST00000034702.6	1189	3	221	0	221	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTCATTTCTCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	75533243	75545053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_75533320_75542667_75543000_75544493
ENSMUSG00000032186.16_75480871_75504676_1	chr9	-	1507	8	FSM	ENSMUSG00000032186.16	ENST00000435126.6	1420	8	7	-94	7	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTCTCTACATGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	75504676	75480870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_75481406_75483927_75484073_75484390_75484535_75493329_75493461_75495171_75495259_75499844_75499968_75502202_75502360_75504491
ENSMUSG00000032187.17_21527560_21578562_1	chr9	+	2882	19	ISM	ENSMUSG00000032187.17	ENST00000645460.1	5396	34	0	36091	0	-36091	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTTCTTACAGGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	21527559	21578562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461
ENSMUSG00000032187.17_21544273_21580294_1	chr9	+	2779	19	ISM	ENSMUSG00000032187.17	ENST00000444061.8	5259	33	172	34359	172	-34359	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGCGGCGGCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	21544272	21580294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230
ENSMUSG00000032187.17_21544284_21580309_1	chr9	+	2783	19	ISM	ENSMUSG00000032187.17	ENST00000444061.8	5259	33	183	34344	183	-34344	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGAAGGAAGTTGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	21544283	21580309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230
ENSMUSG00000032187.17_21546830_21583385_1	chr9	+	2862	20	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	19270	31277	2729	-31268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAAGCTTCCCAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	21546829	21583385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338
ENSMUSG00000032187.17_21547063_21586381_1	chr9	+	2815	22	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	19503	28281	2962	-28272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGGCATGCTGTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21547062	21586381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362
ENSMUSG00000032187.17_21547063_21586442_1	chr9	+	2876	22	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	19503	28220	2962	-28211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTACCCGTGCTGGGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	21547062	21586442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362
ENSMUSG00000032187.17_21547203_21586474_1	chr9	+	2768	22	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	19643	28188	3102	-28179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCAGCTGACACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	21547202	21586474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362
ENSMUSG00000032187.17_21547513_21588812_1	chr9	+	2819	22	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	19953	25850	3412	-25841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACGGTCAACAGTGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	21547512	21588812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745
ENSMUSG00000032187.17_21548729_21589661_1	chr9	+	2811	22	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	21169	25001	4628	-24992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACGAAGAAGAGTTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	21548728	21589661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611
ENSMUSG00000032187.17_21550034_21590320_1	chr9	+	2806	22	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	22474	24342	5933	-24333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGCCGAGGTGGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	21550033	21590320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224
ENSMUSG00000032187.17_21550565_21597335_1	chr9	+	2793	22	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	23005	17327	6464	-17318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAGGAGATCGAAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	21550564	21597335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317
ENSMUSG00000032187.17_21550604_21597398_1	chr9	+	2817	22	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	23044	17264	6503	-17255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCCGGCTCCTCCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	21550603	21597398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317
ENSMUSG00000032187.17_21550652_21597524_1	chr9	+	2895	22	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	23092	17138	6551	-17129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGATGAAGAAGATCGT	NA	NA	NA	NA	NA	NA	NA	NA	21550651	21597524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317
ENSMUSG00000032187.17_21553788_21611381_1	chr9	+	2824	22	ISM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	26323	4132	9687	-3272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGCTGCTGTGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	21553787	21611381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331
ENSMUSG00000032187.17_21558645_21612282_1	chr9	+	2859	21	ISM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	31180	3231	14544	-2371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAAGGGGGAAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	21558644	21612282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149
ENSMUSG00000032187.17_21567002_21614286_1	chr9	+	2787	21	ISM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	39537	1227	22901	-367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGAGGCGCTCGTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	21567001	21614286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ENSMUSG00000032187.17_21570208_21614407_1	chr9	+	2779	20	ISM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	42743	1106	26107	-246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGGCCTGTCTGTCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	21570207	21614407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ENSMUSG00000032187.17_21570247_21614479_1	chr9	+	2812	20	ISM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	42782	1034	26146	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAGCACCATCCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	21570246	21614479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ENSMUSG00000032187.17_21572108_21614662_1	chr9	+	2865	19	ISM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	44643	851	28007	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	21572107	21614662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ENSMUSG00000032192.10_75221423_75251929_1	chr9	+	1181	10	ISM	ENSMUSG00000032192.10	ENSMUST00000215875.2	2105	11	5	1224	5	-317	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAAGGGTGTTCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	75221422	75251929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75221666_75234414_75234552_75239154_75239197_75240090_75240168_75241450_75241584_75242932_75243077_75244552_75244645_75247469_75247519_75250789_75250887_75251762
ENSMUSG00000032192.10_75221536_75252246_1	chr9	+	1080	11	FSM	ENSMUSG00000032192.10	ENSMUST00000215875.2	2105	11	118	907	118	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTGACAGCGTTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	75221535	75252246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_75221666_75234414_75234552_75239154_75239197_75240090_75240168_75241450_75241584_75242932_75243077_75244552_75244645_75247469_75247519_75250789_75250887_75251762_75251930_75252234
ENSMUSG00000032192.10_75221536_75252357_1	chr9	+	1191	11	FSM	ENSMUSG00000032192.10	ENSMUST00000215875.2	2105	11	118	796	118	111	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACCCCGTCCAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	75221535	75252357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_75221666_75234414_75234552_75239154_75239197_75240090_75240168_75241450_75241584_75242932_75243077_75244552_75244645_75247469_75247519_75250789_75250887_75251762_75251930_75252234
ENSMUSG00000032192.10_75239165_75252556_1	chr9	+	1113	9	ISM	ENSMUSG00000032192.10	ENSMUST00000215875.2	2105	11	17747	597	17747	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCTGTCTTCAGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	75239164	75252556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75239197_75240090_75240168_75241450_75241584_75242932_75243077_75244552_75244645_75247469_75247519_75250789_75250887_75251762_75251930_75252234
ENSMUSG00000032192.10_75241451_75252759_1	chr9	+	1207	7	ISM	ENSMUSG00000032192.10	ENSMUST00000215875.2	2105	11	20033	394	20033	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTCAGTTGTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75241450	75252759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75241584_75242932_75243077_75244552_75244645_75247469_75247519_75250789_75250887_75251762_75251930_75252234
ENSMUSG00000032192.10_75244581_75252978_1	chr9	+	1121	5	ISM	ENSMUSG00000032192.10	ENSMUST00000215875.2	2105	11	23163	175	23163	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGGCATGGGAAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	75244580	75252978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75244645_75247469_75247519_75250789_75250887_75251762_75251930_75252234
ENSMUSG00000032193.10_21634779_21650276_1	chr9	+	1484	8	ISM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	0	10939	0	-10935	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGCTGGGCTGCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	21634778	21650276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150
ENSMUSG00000032193.10_21634937_21650775_1	chr9	+	1420	9	ISM	ENSMUSG00000032193.10	ENSMUST00000213114.2	4318	17	9	10436	9	-10436	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGGCTCTCGACA	NA	NA	NA	NA	NA	NA	NA	NA	21634936	21650775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681
ENSMUSG00000032193.10_21643071_21651073_1	chr9	+	1395	9	ISM	ENSMUSG00000032193.10	ENSMUST00000213114.2	4318	17	8143	10138	8143	-10138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATCTGTGGCTGACACCA	NA	NA	NA	NA	NA	NA	NA	NA	21643070	21651073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944
ENSMUSG00000032193.10_21643143_21651142_1	chr9	+	1392	9	ISM	ENSMUSG00000032193.10	ENSMUST00000213114.2	4318	17	8215	10069	8215	-10069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATCGTAGTGGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	21643142	21651142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944
ENSMUSG00000032193.10_21643638_21653530_1	chr9	+	1414	9	ISM	ENSMUSG00000032193.10	ENSMUST00000213114.2	4318	17	8710	7681	8710	-7681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTTGAATGGTGTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	21643637	21653530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482
ENSMUSG00000032193.10_21645038_21655329_1	chr9	+	1393	10	ISM	ENSMUSG00000032193.10	ENSMUST00000213114.2	4318	17	10110	5882	10110	-5882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTTCCACAAGGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	21645037	21655329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217
ENSMUSG00000032193.10_21646614_21657070_1	chr9	+	1408	11	ISM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	11835	4145	11686	-4141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGGTCACCGCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	21646613	21657070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027
ENSMUSG00000032193.10_21650241_21658597_1	chr9	+	1395	10	ISM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	15462	2618	15313	-2614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTGAGTGTGCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	21650240	21658597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444
ENSMUSG00000032193.10_21650719_21659503_1	chr9	+	1394	10	ISM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	15940	1712	15791	-1708	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGCCAAGCTTAGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	21650718	21659503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ENSMUSG00000032193.10_21651080_21659779_1	chr9	+	1400	9	ISM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	16301	1436	16152	-1432	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTTCTGAATTCTACTC	NA	NA	NA	NA	NA	NA	NA	NA	21651079	21659779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ENSMUSG00000032193.10_21653569_21659965_1	chr9	+	1410	8	ISM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	18790	1250	18641	-1246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCCCCCATCAGAAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	21653568	21659965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ENSMUSG00000032193.10_21655216_21660169_1	chr9	+	1443	6	ISM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	20437	1046	20288	-1042	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTGCTCAGTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	21655215	21660169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ENSMUSG00000032193.10_21655304_21660211_1	chr9	+	1397	6	ISM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	20525	1004	20376	-1000	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTGTCCTGTGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	21655303	21660211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ENSMUSG00000032193.10_21657114_21660519_1	chr9	+	1407	4	ISM	ENSMUSG00000032193.10	ENSMUST00000213114.2	4318	17	22186	692	22186	-692	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCAGAGTTGTTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	21657113	21660519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21657202_21657657_21657736_21658444_21658603_21659436
ENSMUSG00000032193.10_21657670_21660630_1	chr9	+	1418	3	ISM	ENSMUSG00000032193.10	ENSMUST00000213114.2	4318	17	22742	581	22742	-581	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGGCACTTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	21657669	21660630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21657736_21658444_21658603_21659436
ENSMUSG00000032193.10_21658542_21660770_1	chr9	+	1395	2	ISM	ENSMUSG00000032193.10	ENSMUST00000213114.2	4318	17	23614	441	23614	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAGAAATTGCCACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	21658541	21660770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21658603_21659436
ENSMUSG00000032199.14_71385719_71390655_1	chr9	-	1516	3	ISM	ENSMUSG00000032199.14	ENSMUST00000163972.2	2138	4	1585	-34	1585	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGAGTTTCCGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	71390655	71385718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_71386823_71388623_71388829_71390448
ENSMUSG00000032199.14_71386025_71390941_1	chr9	-	1496	3	ISM	ENSMUSG00000032199.14	ENSMUST00000163972.2	2138	4	1299	272	1299	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGATGATAGGTCCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	71390941	71386024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_71386823_71388623_71388829_71390448
ENSMUSG00000032199.14_71386147_71393008_1	chr9	-	1563	4	FSM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	209	428	179	-394	multi-exon	FALSE	canonical	NA	NA	NA	NA	2652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTGCTGTCTTCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	71393008	71386146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392965
ENSMUSG00000032199.14_71386212_71393044_1	chr9	-	1534	4	FSM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	173	493	143	-459	multi-exon	FALSE	canonical	NA	NA	NA	NA	1974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACACTGTGGAAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	71393044	71386211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392965
ENSMUSG00000032199.14_71386278_71393090_1	chr9	-	1514	4	FSM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	127	559	97	-525	multi-exon	FALSE	canonical	NA	NA	NA	NA	1405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCAAGAAATGAAGTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	71393090	71386277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392965
ENSMUSG00000032207.11_70705038_70726194_1	chr9	-	1356	7	ISM	ENSMUSG00000032207.11	ENST00000299022.10	1846	10	115629	-4	115629	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATCATGTTTCTTTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	70726194	70705037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_70705229_70705403_70705691_70709354_70709574_70710978_70711097_70719951_70720195_70723811_70724046_70726130
ENSMUSG00000032207.11_70705454_70730681_1	chr9	-	1379	8	ISM	ENSMUSG00000032207.11	ENSMUST00000034731.10	1920	9	111409	44	111142	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGAGGGTGTGCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	70730681	70705453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_70705691_70709354_70709574_70710978_70711097_70719951_70720195_70723811_70724046_70726130_70726249_70727641_70727825_70730654
ENSMUSG00000032207.11_70705608_70730734_1	chr9	-	1278	8	ISM	ENSMUSG00000032207.11	ENSMUST00000034731.10	1920	9	111356	198	111089	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAGACTGACTGAATCG	NA	NA	NA	NA	NA	NA	NA	NA	70730734	70705607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_70705691_70709354_70709574_70710978_70711097_70719951_70720195_70723811_70724046_70726130_70726249_70727641_70727825_70730654
ENSMUSG00000032207.11_70705658_70730786_1	chr9	-	1280	8	ISM	ENSMUSG00000032207.11	ENSMUST00000034731.10	1920	9	111304	248	111037	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTTCACCCGAGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	70730786	70705657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_70705691_70709354_70709574_70710978_70711097_70719951_70720195_70723811_70724046_70726130_70726249_70727641_70727825_70730654
ENSMUSG00000032212.11_70450180_70487320_1	chr9	+	1486	11	ISM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	28	12194	28	-12194	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATCGGAGTGCCAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	70450179	70487320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233
ENSMUSG00000032212.11_70450180_70491320_1	chr9	+	1970	15	ISM	ENSMUSG00000032212.11	ENSMUST00000216816.2	3755	21	144	8196	28	-8194	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAAGGCAAAAACTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	70450179	70491320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213
ENSMUSG00000032212.11_70469083_70493283_1	chr9	+	1885	14	ISM	ENSMUSG00000032212.11	ENSMUST00000216816.2	3755	21	19047	6233	18931	-6231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTCAACAGAGCAGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	70469082	70493283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70469256_70470095_70470144_70479430_70479459_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205
ENSMUSG00000032212.11_70469145_70493343_1	chr9	+	1883	14	ISM	ENSMUSG00000032212.11	ENSMUST00000216816.2	3755	21	19109	6173	18993	-6171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTGTGCAGTCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	70469144	70493343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70469256_70470095_70470144_70479430_70479459_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205
ENSMUSG00000032212.11_70469153_70488662_1	chr9	+	1401	11	ISM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	19001	10852	19001	-10852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTTTGAAAAGATGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	70469152	70488662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582
ENSMUSG00000032212.11_70480794_70494066_1	chr9	+	1872	12	ISM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	30642	5448	30642	-5448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACGAGAGGTCCGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	70480793	70494066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916
ENSMUSG00000032212.11_70480909_70494185_1	chr9	+	1876	12	ISM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	30757	5329	30757	-5329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGAAAAGCGAAGCGAAT	NA	NA	NA	NA	NA	NA	NA	NA	70480908	70494185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916
ENSMUSG00000032212.11_70481190_70496318_1	chr9	+	1866	14	ISM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	31038	3196	31038	-3196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGGGGCCTAGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	70481189	70496318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238
ENSMUSG00000032212.11_70486637_70499042_1	chr9	+	1869	12	ISM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	36485	472	36485	-472	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCTCTGACTGCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	70486636	70499042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ENSMUSG00000032212.11_70487508_70499333_1	chr9	+	1920	10	ISM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	37356	181	37356	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGGCTATTTGAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	70487507	70499333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ENSMUSG00000032212.11_70487578_70499358_1	chr9	+	1875	10	ISM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	37426	156	37426	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGTCTAATTTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	70487577	70499358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ENSMUSG00000032212.11_70488583_70499514_1	chr9	+	1910	8	ISM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	38431	0	38431	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGCTAATGTATTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	70488582	70499514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ENSMUSG00000032215.16_73020785_73029664_1	chr9	+	537	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	55	951	55	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTCGGCCCCTAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	73020784	73029664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
ENSMUSG00000032215.16_73023708_73029851_1	chr9	+	510	4	ISM	ENSMUSG00000032215.16	ENSMUST00000165177.2	597	6	1830	-187	1830	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAACTGTGGGCATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	73023707	73029851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_73023762_73025163_73025228_73028483_73028570_73029545
ENSMUSG00000032215.16_73028482_73029994_1	chr9	+	537	2	ISM	ENSMUSG00000032215.16	ENSMUST00000165177.2	597	6	6604	-330	6604	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGACTTTTTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	73028481	73029994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_73028570_73029545
ENSMUSG00000032216.16_72569720_72642355_1	chr9	+	1752	19	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	92	14779	-44	-13219	5prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGATTATGGGTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	72569719	72642355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291
ENSMUSG00000032216.16_72569769_72642422_1	chr9	+	1770	19	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	141	14712	5	-13152	5prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGCCTTGACTATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	72569768	72642422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291
ENSMUSG00000032216.16_72569769_72642471_1	chr9	+	1819	19	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	141	14663	5	-13103	5prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAAGGAAATGTTCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	72569768	72642471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291
ENSMUSG00000032216.16_72577233_72643981_1	chr9	+	1776	19	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	7605	13153	1271	-11593	internal_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTTGTGTAATGAAGATC	NA	NA	NA	NA	NA	NA	NA	NA	72577232	72643981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948
ENSMUSG00000032216.16_72578512_72644226_1	chr9	+	1770	19	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	8884	12908	2550	-11348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTCTCTTATGCGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	72578511	72644226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155
ENSMUSG00000032216.16_72584594_72646417_1	chr9	+	1795	19	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	14966	10717	8632	-9157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGGACTTTCAGATAC	NA	NA	NA	NA	NA	NA	NA	NA	72584593	72646417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321
ENSMUSG00000032216.16_72593342_72646810_1	chr9	+	1749	18	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	23714	10324	-7095	-8764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTACTTAATTTCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	72593341	72646810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736
ENSMUSG00000032216.16_72616393_72647510_1	chr9	+	1756	18	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	46765	9624	15672	-8064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTACACAGCACTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	72616392	72647510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449
ENSMUSG00000032216.16_72617759_72648969_1	chr9	+	1765	18	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	48131	8165	17038	-6605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAACTATTTCTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	72617758	72648969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909
ENSMUSG00000032216.16_72619447_72650042_1	chr9	+	1812	18	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	49819	7092	18726	-5532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATCTAAGACATGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	72619446	72650042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934
ENSMUSG00000032216.16_72625596_72653714_1	chr9	+	1737	19	ISM	ENSMUSG00000032216.16	ENSMUST00000238315.2	6035	21	24875	3420	24875	-1860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAACAATGGGGCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	72625595	72653714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688
ENSMUSG00000032216.16_72628576_72654435_1	chr9	+	1748	19	ISM	ENSMUSG00000032216.16	ENSMUST00000238315.2	6035	21	27855	2699	27855	-1139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCTTTGACGAACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	72628575	72654435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032216.16_72628777_72654545_1	chr9	+	1735	18	ISM	ENSMUSG00000032216.16	ENSMUST00000238315.2	6035	21	28056	2589	28056	-1029	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATAGTTTCTAAGCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	72628776	72654545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032216.16_72632310_72654702_1	chr9	+	1714	17	ISM	ENSMUSG00000032216.16	ENSMUST00000238315.2	6035	21	31589	2432	31589	-872	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCAGTTGTTGGGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	72632309	72654702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032216.16_72633713_72654806_1	chr9	+	1743	16	ISM	ENSMUSG00000032216.16	ENSMUST00000238315.2	6035	21	32992	2328	32992	-768	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAACTGTGAAATATCT	NA	NA	NA	NA	NA	NA	NA	NA	72633712	72654806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032216.16_72633765_72654855_1	chr9	+	1740	16	ISM	ENSMUSG00000032216.16	ENSMUST00000238315.2	6035	21	33044	2279	33044	-719	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTTTAAAGATGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	72633764	72654855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032216.16_72642339_72655175_1	chr9	+	1713	11	ISM	ENSMUSG00000032216.16	ENST00000338963.6	4959	22	41902	399	41618	-399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCATCCTAAGGCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	72642338	72655175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032216.16_72643949_72655440_1	chr9	+	1795	10	ISM	ENSMUSG00000032216.16	ENST00000338963.6	4959	22	43512	134	43228	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACCAAAGAGTAGTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	72643948	72655440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032216.16_72646322_72655600_1	chr9	+	1762	8	ISM	ENSMUSG00000032216.16	ENST00000338963.6	4959	22	45885	-26	45601	26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCACAGGAAGAGGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	72646321	72655600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032216.16_72646754_72655704_1	chr9	+	1753	7	ISM	ENSMUSG00000032216.16	ENST00000338963.6	4959	22	46317	-130	46033	130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCATCCTCAGGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	72646753	72655704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032216.16_72649967_72655876_1	chr9	+	1715	4	ISM	ENSMUSG00000032216.16	ENST00000338963.6	4959	22	49530	-302	49246	302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCTCTTAGATATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	72649966	72655876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032216.16_72650832_72656001_1	chr9	+	1754	3	ISM	ENSMUSG00000032216.16	ENST00000338963.6	4959	22	50395	-427	50111	427	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCTTGTTGGCTCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	72650831	72656001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72650919_72653688_72653762_72654407
ENSMUSG00000032218.8_70314974_70317543_1	chr9	-	590	3	ISM	ENSMUSG00000032218.8	ENSMUST00000034742.8	1531	9	11286	0	11179	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTATCCTGTGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	70317543	70314973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_70315312_70316561_70316673_70317402
ENSMUSG00000032218.8_70314974_70318021_1	chr9	-	666	4	NNC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	10701	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTATCCTGTGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	70318021	70314973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_70315303_70316561_70316673_70317402_70317544_70317936
ENSMUSG00000032218.8_70315216_70326191_1	chr9	-	972	7	NNC	ENSMUSG00000032218.8	novel	1129	9	NA	NA	2531	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1669	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCAGCCCCTAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	70326191	70315215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_70315255_70316557_70316673_70317402_70317544_70317936_70318168_70320123_70320283_70320383_70320555_70326075
ENSMUSG00000032218.8_70315216_70326191_2	chr9	-	978	7	ISM	ENSMUSG00000032218.8	ENST00000621385.1	1129	9	2531	0	2531	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2701	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCAGCCCCTAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	70326191	70315215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_70315255_70316557_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075
ENSMUSG00000032218.8_70315216_70326191_3	chr9	-	977	7	NNC	ENSMUSG00000032218.8	novel	1129	9	NA	NA	2531	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2087	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCAGCCCCTAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	70326191	70315215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_70315255_70316557_70316673_70317403_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075
ENSMUSG00000032218.8_70315231_70320206_1	chr9	-	653	5	ISM	ENSMUSG00000032218.8	ENSMUST00000034742.8	1531	9	8623	257	8516	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCCTCCCCTCTGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	70320206	70315230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123
ENSMUSG00000032218.8_70316558_70326326_1	chr9	-	981	7	ISM	ENSMUSG00000032218.8	ENST00000621385.1	1129	9	2396	1342	2396	-1342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTCCCGTACCAAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	70326326	70316557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282
ENSMUSG00000032218.8_70316619_70326344_1	chr9	-	938	7	ISM	ENSMUSG00000032218.8	ENST00000621385.1	1129	9	2378	1403	2378	-1403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1888	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAGCACATGGCCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	70326344	70316618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282
ENSMUSG00000032218.8_70317403_70326412_1	chr9	-	946	6	NNC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	2310	-2187	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTAGGAGAAGAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	70326412	70317402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_70317544_70317936_70318168_70320123_70320283_70320383_70320555_70326075_70326190_70326282
ENSMUSG00000032218.8_70317455_70328714_1	chr9	-	915	7	ISM	ENSMUSG00000032218.8	ENST00000621385.1	1129	9	8	2239	8	-2239	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGCCGCTGCCTCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	70328714	70317454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ENSMUSG00000032218.8_70318135_70328829_1	chr9	-	743	6	ISM	ENSMUSG00000032218.8	ENST00000621385.1	1129	9	-107	2919	0	-2919	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACAGCTCTGCTCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	70328829	70318134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ENSMUSG00000032221.15_72346602_72368842_1	chr9	+	4560	9	ISM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	785	465	785	-465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAGAGGAAATTAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	72346601	72368842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72346744_72352124_72352253_72353488_72353592_72355810_72356041_72356432_72356650_72356733_72356842_72359862_72360121_72364059_72364186_72365594
ENSMUSG00000032221.15_72355843_72369307_1	chr9	+	4620	6	ISM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	10026	0	10026	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACATTGTTCTTTATATT	NA	NA	NA	NA	NA	NA	NA	NA	72355842	72369307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72356041_72356432_72356650_72356733_72356842_72359862_72360121_72364059_72364186_72365594
ENSMUSG00000032221.15_72355936_72369308_1	chr9	+	4528	6	ISM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	10119	-1	10119	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTGTTCTTTATATTA	NA	NA	NA	NA	NA	NA	NA	NA	72355935	72369308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72356041_72356432_72356650_72356733_72356842_72359862_72360121_72364059_72364186_72365594
ENSMUSG00000032228.17_71751555_71757209_2	chr9	-	2444	2	ISM	ENSMUSG00000032228.17	ENST00000343827.7	3884	13	46124	-7	46124	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACTAGTGAGTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	71757209	71751554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_71753843_71757053
ENSMUSG00000032228.17_71751797_71763783_1	chr9	-	2397	3	ISM	ENSMUSG00000032228.17	ENST00000343827.7	3884	13	39550	235	39550	208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTATGGAGTATTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	71763783	71751796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_71753843_71757053_71757208_71763586
ENSMUSG00000032228.17_71752544_71790050_1	chr9	-	2376	9	ISM	ENSMUSG00000032228.17	ENST00000343827.7	3884	13	13283	982	13283	250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTACAGTTGTTTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	71790050	71752543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998
ENSMUSG00000032228.17_71752794_71792482_1	chr9	-	2442	12	ISM	ENSMUSG00000032228.17	ENST00000343827.7	3884	13	10851	1232	10851	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTGTGATGAATGCACT	NA	NA	NA	NA	NA	NA	NA	NA	71792482	71752793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464
ENSMUSG00000032228.17_71752906_71803267_1	chr9	-	2474	13	FSM	ENSMUSG00000032228.17	ENST00000343827.7	3884	13	66	1344	66	-112	multi-exon	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAGCAGTAAGTACTACACA	NA	NA	NA	NA	NA	NA	NA	NA	71803267	71752905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71803211
ENSMUSG00000032228.17_71753000_71803272_1	chr9	-	2385	13	FSM	ENSMUSG00000032228.17	ENST00000343827.7	3884	13	61	1438	61	-206	multi-exon	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCAGGCTTCTAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	71803272	71752999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71803211
ENSMUSG00000032228.17_71753052_71803368_1	chr9	-	2429	13	FSM	ENSMUSG00000032228.17	ENST00000343827.7	3884	13	-35	1490	-18	-258	multi-exon	FALSE	canonical	NA	NA	NA	NA	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGGATTTGCCCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	71803368	71753051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71803211
ENSMUSG00000032228.17_71753739_71792571_1	chr9	-	1439	11	NNC	ENSMUSG00000032228.17	novel	1580	12	NA	NA	10762	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAACACTTGAAACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	71792571	71753738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777423_71783270_71783350_71789998_71790064_71790388_71790534_71792464
ENSMUSG00000032228.17_71753801_71803267_1	chr9	-	1439	12	FSM	ENSMUSG00000032228.17	ENST00000537840.5	1580	12	83	58	66	-58	multi-exon	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAGATTTGGACAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	71803267	71753800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71792464_71792571_71803211
ENSMUSG00000032228.17_71757176_71803368_1	chr9	-	1376	11	ISM	ENSMUSG00000032228.17	ENST00000537840.5	1580	12	-18	3433	-18	-3433	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAGAAGAGAAGAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	71803368	71757175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71792464_71792571_71803211
ENSMUSG00000032231.15_69360902_69399077_1	chr9	+	1442	13	NNC	ENSMUSG00000032231.15	novel	1447	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	23793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTTGCCTTTGCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	69360901	69399077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_69361022_69371741_69371802_69374572_69374673_69383334_69383430_69386959_69387074_69390255_69390347_69391061_69391142_69392479_69392540_69393751_69393846_69394834_69394931_69395336_69395396_69396933_69397057_69398727
ENSMUSG00000032231.15_69360902_69399077_2	chr9	+	1441	13	NNC	ENSMUSG00000032231.15	novel	1447	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	33263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTTGCCTTTGCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	69360901	69399077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_69361022_69371741_69371807_69374572_69374673_69383334_69383430_69386959_69387074_69390255_69390347_69391061_69391142_69392479_69392540_69393751_69393846_69394834_69394931_69395336_69395396_69396939_69397057_69398727
ENSMUSG00000032231.15_69360902_69399077_3	chr9	+	1442	13	NNC	ENSMUSG00000032231.15	novel	1447	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	33373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTTGCCTTTGCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	69360901	69399077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_69361022_69371741_69371807_69374572_69374673_69383334_69383430_69386959_69387074_69390255_69390347_69391061_69391142_69392484_69392540_69393751_69393846_69394834_69394931_69395336_69395396_69396933_69397057_69398727
ENSMUSG00000032231.15_69360902_69399077_4	chr9	+	1442	13	NNC	ENSMUSG00000032231.15	novel	1447	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	29671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTTGCCTTTGCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	69360901	69399077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_69361022_69371741_69371807_69374572_69374673_69383334_69383430_69386959_69387074_69390255_69390347_69391061_69391142_69392479_69392540_69393751_69393846_69394834_69394931_69395341_69395396_69396933_69397057_69398727
ENSMUSG00000032231.15_69360902_69399077_5	chr9	+	1439	13	NNC	ENSMUSG00000032231.15	novel	1447	13	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	18348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTTGCCTTTGCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	69360901	69399077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_69361022_69371741_69371807_69374572_69374673_69383334_69383430_69386959_69387074_69390255_69390347_69391069_69391142_69392479_69392540_69393751_69393846_69394834_69394931_69395336_69395396_69396933_69397057_69398727
ENSMUSG00000032235.16_69307813_69323151_1	chr9	+	1314	9	ISM	ENSMUSG00000032235.16	ENST00000483823.1	2675	15	44	16295	44	7916	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCTGTGTACCAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	69307812	69323151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69307864_69314546_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69322812_69322899
ENSMUSG00000032235.16_69314624_69323285_1	chr9	+	1320	8	ISM	ENSMUSG00000032235.16	ENST00000483823.1	2675	15	6855	16161	6855	8050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATCATTGATACAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	69314623	69323285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69322812_69322899
ENSMUSG00000032235.16_69315640_69323395_1	chr9	+	1307	7	ISM	ENSMUSG00000032235.16	ENST00000483823.1	2675	15	7871	16051	7871	8160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGGAATCTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	69315639	69323395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69322812_69322899
ENSMUSG00000032235.16_69317487_69323516_1	chr9	+	1313	6	ISM	ENSMUSG00000032235.16	ENST00000483823.1	2675	15	9718	15930	9718	8281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCCTTGACTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	69317486	69323516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69322812_69322899
ENSMUSG00000032235.16_69318046_69323644_1	chr9	+	1405	5	ISM	ENSMUSG00000032235.16	ENST00000483823.1	2675	15	10277	15802	10277	8409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTGAATATCAAGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	69318045	69323644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69318172_69318588_69318749_69319483_69319666_69322619_69322812_69322899
ENSMUSG00000032235.16_69318712_69324391_1	chr9	+	1331	5	ISM	ENSMUSG00000032235.16	ENST00000483823.1	2675	15	10943	15055	10943	9156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTATCTGAGAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	69318711	69324391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69318749_69319483_69319666_69322619_69322812_69322899_69323644_69324215
ENSMUSG00000032235.16_69319522_69329047_1	chr9	+	1361	5	ISM	ENSMUSG00000032235.16	ENST00000483823.1	2675	15	11753	10399	11753	-10399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCAACTGCTCGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	69319521	69329047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69319666_69322619_69322812_69322899_69323644_69324215_69324392_69328942
ENSMUSG00000032235.16_69319623_69332987_1	chr9	+	1334	6	ISM	ENSMUSG00000032235.16	ENST00000483823.1	2675	15	11854	6459	11854	-6459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTCAGAAGAATTAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	69319622	69332987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69319666_69322619_69322812_69322899_69323644_69324215_69324392_69328942_69329073_69332938
ENSMUSG00000032235.16_69322671_69335626_1	chr9	+	1356	7	ISM	ENSMUSG00000032235.16	ENST00000483823.1	2675	15	14902	3820	14902	-3820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGCAGAAGATTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	69322670	69335626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69322812_69322899_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597
ENSMUSG00000032235.16_69322738_69335660_1	chr9	+	1323	7	ISM	ENSMUSG00000032235.16	ENST00000483823.1	2675	15	14969	3786	14969	-3786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCTCAGATGGAAAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	69322737	69335660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69322812_69322899_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597
ENSMUSG00000032235.16_69322796_69335724_1	chr9	+	1329	7	ISM	ENSMUSG00000032235.16	ENST00000483823.1	2675	15	15027	3722	15027	-3722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTACCCTCCAGTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	69322795	69335724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69322812_69322899_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597
ENSMUSG00000032235.16_69323194_69339446_1	chr9	+	1275	7	ISM	ENSMUSG00000032235.16	ENST00000483823.1	2675	15	15425	0	15425	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGGGCTGGACCATAGA	NA	NA	NA	NA	NA	NA	NA	NA	69323193	69339446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ENSMUSG00000032239.11_22359607_22379466_1	chr9	-	956	6	FSM	ENSMUSG00000032239.11	ENSMUST00000034763.10	1134	6	178	0	178	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGTCATTATTAATACAG	NA	NA	NA	NA	NA	NA	NA	NA	22379466	22359606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_22360151_22361097_22361160_22365074_22365167_22368668_22368799_22370006_22370038_22379369
ENSMUSG00000032239.11_22359769_22379466_2	chr9	-	794	6	FSM	ENSMUSG00000032239.11	ENSMUST00000034763.10	1134	6	178	162	178	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGGGAGGTGATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	22379466	22359768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_22360151_22361097_22361160_22365074_22365167_22368668_22368799_22370006_22370038_22379369
ENSMUSG00000032239.11_22359769_22379466_3	chr9	-	781	5	NNC	ENSMUSG00000032239.11	novel	796	7	NA	NA	178	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGGGAGGTGATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	22379466	22359768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_22360151_22361097_22361160_22365074_22365167_22368668_22368799_22379351
ENSMUSG00000032239.11_22359769_22379644_1	chr9	-	972	6	FSM	ENSMUSG00000032239.11	ENSMUST00000034763.10	1134	6	0	162	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGGGAGGTGATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	22379644	22359768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_22360151_22361097_22361160_22365074_22365167_22368668_22368799_22370006_22370038_22379369
ENSMUSG00000032245.13_62746074_62758163_2	chr9	+	821	6	FSM	ENSMUSG00000032245.13	ENST00000566347.5	741	6	-78	-2	7	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGAGGCTTACTGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	62746073	62758163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_62746237_62751851_62751967_62753235_62753335_62754866_62754923_62756390_62756514_62757898
ENSMUSG00000032245.13_62754315_62758163_1	chr9	+	566	4	ISM	ENSMUSG00000032245.13	ENSMUST00000034776.13	2142	7	8248	1125	8163	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGAGGCTTACTGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	62754314	62758163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_62754437_62754866_62754923_62756390_62756514_62757898
ENSMUSG00000032245.13_62754886_62758334_1	chr9	+	596	3	ISM	ENSMUSG00000032245.13	ENST00000566347.5	741	6	8734	-173	8734	173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGGACTTAAGATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	62754885	62758334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_62754923_62756390_62756514_62757898
ENSMUSG00000032245.13_62756410_62758444_1	chr9	+	650	2	ISM	ENSMUSG00000032245.13	ENST00000566347.5	741	6	10258	-283	10258	283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTCAGGACTGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	62756409	62758444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_62756514_62757898
ENSMUSG00000032245.13_62756482_62758474_1	chr9	+	608	2	ISM	ENSMUSG00000032245.13	ENST00000566347.5	741	6	10330	-313	10330	313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCTTCTGGTGACAAGC	NA	NA	NA	NA	NA	NA	NA	NA	62756481	62758474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_62756514_62757898
ENSMUSG00000032251.13_82711593_82728832_1	chr9	+	1250	4	FSM	ENSMUSG00000032251.13	ENSMUST00000113245.9	2158	4	0	908	0	-241	multi-exon	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGCATCTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	82711592	82728832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_82712393_82719470_82719537_82728351_82728483_82728579
ENSMUSG00000032251.13_82719488_82729608_1	chr9	+	1209	3	ISM	ENSMUSG00000032251.13	ENSMUST00000113245.9	2158	4	7895	132	7629	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTAAATCTGCCCCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	82719487	82729608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_82719537_82728351_82728483_82728579
ENSMUSG00000032251.13_82728350_82729740_1	chr9	+	1294	2	ISM	ENSMUSG00000032251.13	ENSMUST00000113245.9	2158	4	16757	0	16491	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCGATGTTGATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	82728349	82729740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_82728483_82728579
ENSMUSG00000032252.15_61965399_61977466_1	chr9	-	3335	3	FSM	ENSMUSG00000032252.15	ENSMUST00000034785.8	4626	3	422	869	422	-869	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATCCCCTAAGAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	61977466	61965398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_61968318_61975666_61975913_61977296
ENSMUSG00000032253.14_82752834_82758242_1	chr9	-	1460	3	ISM	ENSMUSG00000032253.14	ENSMUST00000034787.12	10756	40	99327	4622	99327	-4622	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGTAGCAGTACATTAA	NA	NA	NA	NA	NA	NA	NA	NA	82758242	82752833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_82753915_82757342_82757541_82758061
ENSMUSG00000032254.11_61824562_61832093_1	chr9	-	1356	7	ISM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	21963	0	12726	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	61832093	61824561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913
ENSMUSG00000032254.11_61824924_61833697_1	chr9	-	1382	10	ISM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	20359	362	11122	-362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTTACTCGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	61833697	61824923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641
ENSMUSG00000032254.11_61826185_61833800_1	chr9	-	1444	9	ISM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	20256	1623	11019	-4	internal_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGAGCACTATGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	61833800	61826184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641
ENSMUSG00000032254.11_61827157_61834445_1	chr9	-	1421	8	ISM	ENSMUSG00000032254.11	ENST00000395392.6	2636	19	10374	976	10374	-976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGTTGGTCACAAATC	NA	NA	NA	NA	NA	NA	NA	NA	61834445	61827156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318
ENSMUSG00000032254.11_61828300_61834749_1	chr9	-	1459	8	ISM	ENSMUSG00000032254.11	ENST00000395392.6	2636	19	10070	2119	10070	-2119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGACAAGTCTTCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	61834749	61828299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629
ENSMUSG00000032254.11_61828469_61834915_1	chr9	-	1370	9	ISM	ENSMUSG00000032254.11	ENST00000395392.6	2636	19	9904	2288	9904	-2288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGCCTGCCTCTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	61834915	61828468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835
ENSMUSG00000032254.11_61831187_61837048_1	chr9	-	1413	9	ISM	ENSMUSG00000032254.11	ENST00000395392.6	2636	19	7771	5006	7771	-5006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTGCCAGCATTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	61837048	61831186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945
ENSMUSG00000032254.11_61831354_61839469_1	chr9	-	1481	11	ISM	ENSMUSG00000032254.11	ENST00000395392.6	2636	19	5350	5173	5350	-5173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTCAATGTCACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	61839469	61831353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356
ENSMUSG00000032254.11_61831925_61842717_1	chr9	-	1381	11	ISM	ENSMUSG00000032254.11	ENST00000395392.6	2636	19	2102	5744	2102	-5744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTCTACCTGTAAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	61842717	61831924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661
ENSMUSG00000032254.11_61831988_61842771_1	chr9	-	1372	11	ISM	ENSMUSG00000032254.11	ENST00000395392.6	2636	19	2048	5807	2048	-5807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGAGAGACCCTCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	61842771	61831987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661
ENSMUSG00000032254.11_61832045_61842832_1	chr9	-	1376	11	ISM	ENSMUSG00000032254.11	ENST00000395392.6	2636	19	1987	5864	1987	-5864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAGATGAAAAGCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	61842832	61832044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661
ENSMUSG00000032254.11_61832334_61844376_1	chr9	-	1368	12	ISM	ENSMUSG00000032254.11	ENST00000395392.6	2636	19	443	6153	443	-6153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTTTCTGACAAGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	61844376	61832333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363
ENSMUSG00000032254.11_61832334_61844434_1	chr9	-	1426	12	ISM	ENSMUSG00000032254.11	ENST00000395392.6	2636	19	385	6153	385	-6153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTTTCTGACAAGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	61844434	61832333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363
ENSMUSG00000032254.11_61832879_61844777_1	chr9	-	1399	12	ISM	ENSMUSG00000032254.11	ENST00000395392.6	2636	19	42	6698	42	-6698	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATCTCGGGACAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	61844777	61832878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711
ENSMUSG00000032254.11_61833640_61851613_1	chr9	-	1479	12	ISM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	2443	9078	2443	-7459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGCAGAGCAGCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	61851613	61833639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484
ENSMUSG00000032254.11_61834356_61854018_1	chr9	-	1476	13	ISM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	38	9794	38	-8175	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGAACCTGCCTCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	61854018	61834355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ENSMUSG00000032257.7_49326885_49330033_1	chr9	-	1367	2	ISM	ENSMUSG00000032257.7	ENST00000303941.4	2232	7	8196	7	8196	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGCCTGAACCCCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	49330033	49326884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49328151_49329932
ENSMUSG00000032257.7_49327077_49330785_1	chr9	-	1341	3	ISM	ENSMUSG00000032257.7	ENST00000303941.4	2232	7	7444	199	7444	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACACCTGCCCACCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	49330785	49327076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49328151_49329932_49330080_49330665
ENSMUSG00000032257.7_49327203_49331676_1	chr9	-	1353	5	ISM	ENSMUSG00000032257.7	ENST00000303941.4	2232	7	6553	325	6553	-325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCAATGCTGCTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	49331676	49327202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49328151_49329932_49330080_49330665_49330822_49331290_49331341_49331624
ENSMUSG00000032257.7_49327253_49331741_1	chr9	-	1368	5	ISM	ENSMUSG00000032257.7	ENST00000303941.4	2232	7	6488	375	6488	-375	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAAGGGGAGGAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	49331741	49327252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49328151_49329932_49330080_49330665_49330822_49331290_49331341_49331624
ENSMUSG00000032257.7_49327384_49333033_1	chr9	-	1339	6	ISM	ENSMUSG00000032257.7	ENST00000303941.4	2232	7	5196	506	5196	-506	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGGGATGGACACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	49333033	49327383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49328151_49329932_49330080_49330665_49330822_49331290_49331341_49331624_49331777_49332966
ENSMUSG00000032257.7_49327450_49333108_1	chr9	-	1348	6	ISM	ENSMUSG00000032257.7	ENST00000303941.4	2232	7	5121	572	5121	-572	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGGGCAAGGACCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	49333108	49327449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49328151_49329932_49330080_49330665_49330822_49331290_49331341_49331624_49331777_49332966
ENSMUSG00000032257.7_49327716_49338174_1	chr9	-	1339	7	FSM	ENSMUSG00000032257.7	ENST00000303941.4	2232	7	55	838	55	-838	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTCCCGTCAGGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	49338174	49327715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_49328151_49329932_49330080_49330665_49330822_49331290_49331341_49331624_49331777_49332966_49333262_49338070
ENSMUSG00000032258.16_83276818_83305557_1	chr9	-	2278	6	ISM	ENSMUSG00000032258.16	ENSMUST00000034791.15	4160	8	17523	1346	17523	-1346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGCAGACAGCAGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	83305557	83276817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075
ENSMUSG00000032262.14_83661439_83665257_1	chr9	-	1493	2	ISM	ENSMUSG00000032262.14	ENSMUST00000034796.14	3001	6	23048	694	23048	-694	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTGTGTCCCCTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	83665257	83661438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_83662863_83665188
ENSMUSG00000032262.14_83661652_83667259_1	chr9	-	1511	3	ISM	ENSMUSG00000032262.14	ENSMUST00000034796.14	3001	6	21046	907	21046	-907	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACGTGGACATACACCTA	NA	NA	NA	NA	NA	NA	NA	NA	83667259	83661651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_83662863_83665188_83665317_83667087
ENSMUSG00000032264.10_48969027_48973532_1	chr9	+	431	5	ISM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	2114	16540	2114	-16540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCACTGAGCAGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	48969026	48973532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492
ENSMUSG00000032264.10_48972439_48978011_1	chr9	+	454	4	ISM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	5526	12061	5526	-12061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCCTGGGATCGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	48972438	48978011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_48972515_48973492_48973646_48975309_48975502_48977978
ENSMUSG00000032264.10_48973592_48978142_1	chr9	+	410	3	ISM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	6679	11930	6679	-11930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGGGTGGAGAGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	48973591	48978142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_48973646_48975309_48975502_48977978
ENSMUSG00000032264.10_48975442_48980915_1	chr9	+	449	4	ISM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	8529	9157	8529	-9157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGATGCTGATCACAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	48975441	48980915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_48975502_48977978_48978143_48979959_48980143_48980873
ENSMUSG00000032264.10_48981056_48985449_1	chr9	+	430	4	ISM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	14143	4623	14143	-4623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAGGCTGATGTAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	48981055	48985449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_48981113_48982881_48982954_48984502_48984673_48985318
ENSMUSG00000032264.10_48984527_48988807_1	chr9	+	465	4	ISM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	17614	1265	17614	-1265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGTCCACAAGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	48984526	48988807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_48984673_48985318_48985450_48986204_48986337_48988751
ENSMUSG00000032264.10_48985376_48989532_1	chr9	+	443	4	ISM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	18463	540	18463	-540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTTCCAGCGAAGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	48985375	48989532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_48985450_48986204_48986337_48988751_48988955_48989498
ENSMUSG00000032264.10_48986236_48989634_1	chr9	+	440	3	ISM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	19323	438	19323	-438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTCCTGACTCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	48986235	48989634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_48986337_48988751_48988955_48989498
ENSMUSG00000032268.14_49020302_49026912_1	chr9	+	815	6	NNC	ENSMUSG00000032268.14	novel	821	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGTGAGTGTGGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	49020301	49026912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_49020438_49020641_49020756_49024423_49024603_49025793_49025893_49026332_49026476_49026768
ENSMUSG00000032268.14_49020302_49026912_2	chr9	+	819	6	FSM	ENSMUSG00000032268.14	ENST00000544476.1	821	6	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGTGAGTGTGGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	49020301	49026912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_49020438_49020641_49020756_49024423_49024603_49025793_49025893_49026332_49026476_49026764
ENSMUSG00000032268.14_49020714_49024494_1	chr9	+	303	3	ISM	ENSMUSG00000032268.14	ENST00000299882.11	1011	7	414	2418	414	-2418	internal_fragment	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGGAACTATGGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	49020713	49024494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_49020783_49023487_49023651_49024423
ENSMUSG00000032269.9_48810949_48820038_1	chr9	-	1405	8	ISM	ENSMUSG00000032269.9	ENST00000375498.6	1725	9	2474	-1	2283	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTATGGGGGAGTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	48820038	48810948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_48811291_48811860_48812083_48812173_48812385_48812717_48812879_48815876_48816047_48817582_48817693_48818653_48818699_48819894
ENSMUSG00000032269.9_48810949_48822453_1	chr9	-	1758	8	FSM	ENSMUSG00000032269.9	ENST00000355556.6	1816	8	59	-1	-54	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTATGGGGGAGTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	48822453	48810948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_48811291_48811860_48812385_48812717_48812879_48815876_48816047_48817582_48817693_48818653_48818699_48819894_48820039_48822191
ENSMUSG00000032269.9_48810949_48822453_2	chr9	-	1757	8	NNC	ENSMUSG00000032269.9	novel	1816	8	NA	NA	-54	1	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTATGGGGGAGTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	48822453	48810948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_48811291_48811861_48812385_48812717_48812879_48815876_48816047_48817582_48817693_48818653_48818699_48819894_48820039_48822191
ENSMUSG00000032269.9_48810949_48822507_1	chr9	-	1805	8	NIC	ENSMUSG00000032269.9	novel	1816	8	NA	NA	5	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTATGGGGGAGTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	48822507	48810948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_-_48811291_48811860_48812385_48812717_48812879_48815876_48816047_48817582_48817693_48818653_48818699_48819894_48820039_48822198
ENSMUSG00000032269.9_48811107_48822321_1	chr9	-	1377	9	FSM	ENSMUSG00000032269.9	ENST00000375498.6	1725	9	191	157	0	-157	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGCGGGTGGGATACG	NA	NA	NA	NA	NA	NA	NA	NA	48822321	48811106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_48811291_48811860_48812083_48812173_48812385_48812717_48812879_48815876_48816047_48817582_48817693_48818653_48818699_48819894_48820039_48822191
ENSMUSG00000032269.9_48811168_48822321_1	chr9	-	1316	9	FSM	ENSMUSG00000032269.9	ENST00000375498.6	1725	9	191	218	0	-218	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATCCTCCATCCGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	48822321	48811167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_48811291_48811860_48812083_48812173_48812385_48812717_48812879_48815876_48816047_48817582_48817693_48818653_48818699_48819894_48820039_48822191
ENSMUSG00000032269.9_48811216_48822399_1	chr9	-	1346	9	FSM	ENSMUSG00000032269.9	ENST00000375498.6	1725	9	113	266	0	-266	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACCACCAAGGGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	48822399	48811215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_48811291_48811860_48812083_48812173_48812385_48812717_48812879_48815876_48816047_48817582_48817693_48818653_48818699_48819894_48820039_48822191
ENSMUSG00000032271.14_48503177_48516377_1	chr9	-	967	3	FSM	ENSMUSG00000032271.14	ENSMUST00000034808.12	1043	3	76	0	76	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGCTCACTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	48516377	48503176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_48503663_48514653_48514862_48516104
ENSMUSG00000032279.12_54493618_54511049_1	chr9	+	1684	11	FSM	ENSMUSG00000032279.12	ENSMUST00000217484.2	2580	11	0	896	0	-121	multi-exon	FALSE	canonical	NA	NA	NA	NA	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAAACAGGGTTTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	54493617	54511049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUSG00000032279.12_54493765_54511220_1	chr9	+	1708	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	-30	725	-30	50	multi-exon	FALSE	canonical	NA	NA	NA	NA	1705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATCCATAATGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	54493764	54511220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUSG00000032279.12_54493765_54511230_1	chr9	+	1718	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	-30	715	-30	60	multi-exon	FALSE	canonical	NA	NA	NA	NA	1762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAATGATGTAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	54493764	54511230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUSG00000032279.12_54497140_54504253_1	chr9	+	482	5	ISM	ENSMUSG00000032279.12	ENST00000558554.5	1492	10	0	6917	0	-6917	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCCCAGGAGGCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	54497139	54504253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_54497205_54499677_54499762_54502449_54502565_54503390_54503474_54504118
ENSMUSG00000032279.12_54499678_54505779_1	chr9	+	519	5	ISM	ENSMUSG00000032279.12	ENST00000558554.5	1492	10	2538	5391	2538	-5391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATGCATCAGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	54499677	54505779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_54499762_54502449_54502565_54503390_54503474_54504118_54504253_54505676
ENSMUSG00000032279.12_54502378_54511333_1	chr9	+	1683	8	ISM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	8583	612	5238	163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAAGAGCTTTCAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	54502377	54511333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUSG00000032279.12_54502378_54511421_1	chr9	+	1771	8	ISM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	8583	524	5238	251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCCCTCCCACGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	54502377	54511421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUSG00000032279.12_54502529_54511476_1	chr9	+	1675	8	ISM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	8734	469	5389	306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGCCCCTTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	54502528	54511476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUSG00000032279.12_54503377_54511603_1	chr9	+	1675	7	ISM	ENSMUSG00000032279.12	ENST00000558554.5	1492	10	6237	-433	6237	-342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCTGTGTTACCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	54503376	54511603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUSG00000032279.12_54503423_54511658_1	chr9	+	1684	7	ISM	ENSMUSG00000032279.12	ENST00000558554.5	1492	10	6283	-488	6283	-287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCTCCACAGCATGA	NA	NA	NA	NA	NA	NA	NA	NA	54503422	54511658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUSG00000032279.12_54504200_54511802_1	chr9	+	1696	6	ISM	ENSMUSG00000032279.12	ENST00000558554.5	1492	10	7060	-632	7060	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGGTCATTTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	54504199	54511802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUSG00000032279.12_54505713_54511945_1	chr9	+	1750	5	ISM	ENSMUSG00000032279.12	ENST00000558554.5	1492	10	8573	-775	8573	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGGCGTTTGCATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	54505712	54511945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUSG00000032280.17_61279665_61322019_1	chr9	+	1037	7	ISM	ENSMUSG00000032280.17	ENST00000559191.5	1536	9	-35	2204	0	-1977	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGAGTGGCTGGCCGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	61279664	61322019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_61279906_61317356_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992
ENSMUSG00000032280.17_61279811_61322059_1	chr9	+	931	7	ISM	ENSMUSG00000032280.17	ENST00000559191.5	1536	9	111	2164	111	-1937	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCCTGCACCACACTAAG	NA	NA	NA	NA	NA	NA	NA	NA	61279810	61322059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_61279906_61317356_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992
ENSMUSG00000032280.17_61279865_61322111_1	chr9	+	929	7	ISM	ENSMUSG00000032280.17	ENST00000559191.5	1536	9	165	2112	165	-1885	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGTGCTGTCCCTCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	61279864	61322111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_61279906_61317356_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992
ENSMUSG00000032280.17_61281060_61324258_1	chr9	+	2714	18	NIC	ENSMUSG00000032280.17	novel	2731	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATCCTCATAAGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	61281059	61324258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61314619_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ENSMUSG00000032280.17_61281257_61319674_1	chr9	+	1409	13	NIC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	23	-4322	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTGTGACCATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	61281256	61319674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61314619_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546
ENSMUSG00000032280.17_61281266_61318622_1	chr9	+	1282	12	NIC	ENSMUSG00000032280.17	novel	2731	18	NA	NA	32	-5374	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCACTTGGCTATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	61281265	61318622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61314619_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544
ENSMUSG00000032280.17_61281266_61323998_1	chr9	+	2238	18	NNC	ENSMUSG00000032280.17	novel	2271	18	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	806	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGACTCTAACAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	61281265	61323998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61314619_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320137_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ENSMUSG00000032280.17_61281266_61323998_2	chr9	+	2239	18	NIC	ENSMUSG00000032280.17	novel	2271	18	NA	NA	32	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGACTCTAACAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	61281265	61323998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61314619_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ENSMUSG00000032280.17_61281811_61319596_1	chr9	+	1247	12	NIC	ENSMUSG00000032280.17	novel	2731	18	NA	NA	577	-4400	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCATGATGCACTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	61281810	61319596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61314619_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546
ENSMUSG00000032280.17_61300481_61319796_1	chr9	+	1356	10	NIC	ENSMUSG00000032280.17	novel	2731	18	NA	NA	19247	-4200	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCGCTAGGGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	61300480	61319796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_61300548_61301889_61301965_61309134_61309340_61314619_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546
ENSMUSG00000032280.17_61301888_61319796_1	chr9	+	1293	9	ISM	ENSMUSG00000032280.17	ENST00000558201.5	2731	18	20828	4462	20654	-4200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCGCTAGGGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	61301887	61319796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_61301965_61309134_61309342_61314619_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546
ENSMUSG00000032280.17_61309141_61320220_1	chr9	+	1294	9	ISM	ENSMUSG00000032280.17	ENST00000558201.5	2731	18	28081	4038	27907	-3776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGACCTGGCCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	61309140	61320220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_61309342_61314619_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136
ENSMUSG00000032280.17_61309248_61320279_1	chr9	+	1246	9	ISM	ENSMUSG00000032280.17	ENST00000558201.5	2731	18	28188	3979	28014	-3717	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTTATGCCCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	61309247	61320279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_61309342_61314619_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136
ENSMUSG00000032280.17_61309296_61320342_1	chr9	+	1261	9	ISM	ENSMUSG00000032280.17	ENST00000558201.5	2731	18	28236	3916	28062	-3654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTGCGGTTTGGGATC	NA	NA	NA	NA	NA	NA	NA	NA	61309295	61320342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_61309342_61314619_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136
ENSMUSG00000032280.17_61314627_61321239_1	chr9	+	1265	9	ISM	ENSMUSG00000032280.17	ENST00000558201.5	2731	18	33567	3019	33393	-2757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGATGGGGCCAGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	61314626	61321239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224
ENSMUSG00000032280.17_61314651_61321316_1	chr9	+	1318	9	ISM	ENSMUSG00000032280.17	ENST00000558201.5	2731	18	33591	2942	33417	-2680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTGGGACCTACGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	61314650	61321316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224
ENSMUSG00000032280.17_61314695_61322065_1	chr9	+	1394	10	ISM	ENSMUSG00000032280.17	ENST00000560939.5	2965	18	33878	2196	33461	-1931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACCACACTAAGCCCGAC	NA	NA	NA	NA	NA	NA	NA	NA	61314694	61322065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992
ENSMUSG00000032280.17_61314709_61321372_1	chr9	+	1316	9	ISM	ENSMUSG00000032280.17	ENST00000558201.5	2731	18	33649	2886	33475	-2624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTAACCCAAGCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	61314708	61321372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224
ENSMUSG00000032280.17_61316071_61322084_1	chr9	+	1287	8	ISM	ENSMUSG00000032280.17	ENST00000558201.5	2731	18	35011	2174	34837	-1912	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATACCAGCTGCACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	61316070	61322084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992
ENSMUSG00000032280.17_61316646_61323998_1	chr9	+	1312	9	ISM	ENSMUSG00000032280.17	ENST00000558201.5	2731	18	35586	260	35412	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGACTCTAACAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	61316645	61323998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ENSMUSG00000032280.17_61317357_61324258_1	chr9	+	1380	8	ISM	ENSMUSG00000032280.17	ENST00000558201.5	2731	18	36297	0	36123	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATCCTCATAAGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	61317356	61324258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ENSMUSG00000032285.16_54606499_54608305_1	chr9	+	935	3	FSM	ENSMUSG00000032285.16	ENST00000489435.2	934	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATTATACCCATTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	54606498	54608305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_54606698_54607005_54607145_54607708
ENSMUSG00000032285.16_54613348_54622191_1	chr9	+	1287	6	NNC	ENSMUSG00000032285.16	novel	1293	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAATCTGTTTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	54613347	54622191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_54613528_54615671_54615772_54616416_54616645_54617785_54618017_54621553_54621659_54621748
ENSMUSG00000032285.16_54613348_54622191_2	chr9	+	1287	6	NNC	ENSMUSG00000032285.16	novel	1293	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAATCTGTTTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	54613347	54622191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_54613528_54615666_54615772_54616416_54616645_54617785_54618012_54621553_54621659_54621748
ENSMUSG00000032285.16_54613402_54622191_1	chr9	+	1233	6	NNC	ENSMUSG00000032285.16	novel	1293	6	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAATCTGTTTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	54613401	54622191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_54613528_54615666_54615772_54616416_54616645_54617785_54618017_54621558_54621659_54621748
ENSMUSG00000032285.16_54613402_54622191_2	chr9	+	1232	6	NNC	ENSMUSG00000032285.16	novel	1293	6	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAATCTGTTTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	54613401	54622191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_54613528_54615666_54615772_54616416_54616645_54617785_54618017_54621553_54621655_54621750
ENSMUSG00000032285.16_54613402_54622191_3	chr9	+	1232	6	NNC	ENSMUSG00000032285.16	novel	1293	6	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAATCTGTTTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	54613401	54622191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_54613528_54615666_54615766_54616416_54616645_54617785_54618017_54621553_54621659_54621748
ENSMUSG00000032285.16_54613402_54622191_4	chr9	+	1238	6	ISM	ENSMUSG00000032285.16	ENSMUST00000120452.8	1827	8	7245	-146	55	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAATCTGTTTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	54613401	54622191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_54613528_54615666_54615772_54616416_54616645_54617785_54618017_54621553_54621655_54621744
ENSMUSG00000032290.8_56940416_56968757_1	chr9	+	1542	8	ISM	ENSMUSG00000032290.8	ENSMUST00000034832.8	4101	13	38209	1334	38209	-1334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCATCTCCCAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	56940415	56968757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994_56965146_56967137_56967346_56968228
ENSMUSG00000032290.8_56965040_56969491_1	chr9	+	1577	3	ISM	ENSMUSG00000032290.8	ENSMUST00000034832.8	4101	13	62833	600	62833	-600	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAGTGAACAAGAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	56965039	56969491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_56965146_56967137_56967346_56968228
ENSMUSG00000032294.18_59563651_59572650_1	chr9	+	450	2	ISM	ENSMUSG00000032294.18	ENSMUST00000034834.16	2432	11	0	14008	0	-13822	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGGCCCTCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	59563650	59572650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59563933_59572482
ENSMUSG00000032294.18_59563872_59575963_1	chr9	+	452	4	ISM	ENSMUSG00000032294.18	ENSMUST00000163694.4	2041	11	16	10509	16	-10509	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATCTAGAATAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	59563871	59575963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831
ENSMUSG00000032294.18_59572536_59576290_1	chr9	+	433	4	ISM	ENSMUSG00000032294.18	ENSMUST00000163694.4	2041	11	8680	10182	8680	-10182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGACTACAAGAACATCT	NA	NA	NA	NA	NA	NA	NA	NA	59572535	59576290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59572650_59573145_59573238_59575831_59575964_59576195
ENSMUSG00000032294.18_59573175_59577881_1	chr9	+	514	4	ISM	ENSMUSG00000032294.18	ENSMUST00000163694.4	2041	11	9319	8591	9319	-8591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCAGGATGTGGACATG	NA	NA	NA	NA	NA	NA	NA	NA	59573174	59577881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59573238_59575831_59575964_59576195_59576383_59577749
ENSMUSG00000032294.18_59576196_59578022_1	chr9	+	460	2	ISM	ENSMUSG00000032294.18	ENSMUST00000163694.4	2041	11	12340	8450	12340	-8450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTGAGACCCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	59576195	59578022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59576383_59577749
ENSMUSG00000032294.18_59576312_59578924_1	chr9	+	409	3	ISM	ENSMUSG00000032294.18	ENSMUST00000163694.4	2041	11	12456	7548	12456	-7548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCAGAGAAGGTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	59576311	59578924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59576383_59577749_59578021_59578857
ENSMUSG00000032294.18_59577851_59579321_1	chr9	+	439	3	ISM	ENSMUSG00000032294.18	ENSMUST00000163694.4	2041	11	13995	7151	13995	-7151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACCCTCTGGAGGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	59577850	59579321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59578021_59578857_59579009_59579203
ENSMUSG00000032294.18_59577890_59582880_1	chr9	+	465	4	ISM	ENSMUSG00000032294.18	ENST00000389093.7	2108	9	14138	3775	14034	-3592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCAGCTATTCGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	59577889	59582880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59578021_59578857_59579009_59579203_59579357_59582850
ENSMUSG00000032294.18_59577963_59582908_1	chr9	+	420	4	ISM	ENSMUSG00000032294.18	ENST00000389093.7	2108	9	14211	3747	14107	-3564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCGCCCATTACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	59577962	59582908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59578021_59578857_59579009_59579203_59579357_59582850
ENSMUSG00000032294.18_59578006_59582967_1	chr9	+	436	4	ISM	ENSMUSG00000032294.18	ENST00000389093.7	2108	9	14254	3688	14150	-3505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCAAGTGCTGCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	59578005	59582967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59578021_59578857_59579009_59579203_59579357_59582850
ENSMUSG00000032294.18_59578869_59585342_1	chr9	+	476	4	ISM	ENSMUSG00000032294.18	ENST00000389093.7	2108	9	15117	1313	15013	-1130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTACCGCCCTCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	59578868	59585342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59579009_59579203_59579357_59582850_59583018_59585326
ENSMUSG00000032294.18_59578869_59585381_1	chr9	+	515	4	ISM	ENSMUSG00000032294.18	ENST00000389093.7	2108	9	15117	1274	15013	-1091	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAATCCCCAGACTGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	59578868	59585381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59579009_59579203_59579357_59582850_59583018_59585326
ENSMUSG00000032294.18_59579202_59585508_1	chr9	+	504	3	ISM	ENSMUSG00000032294.18	ENST00000389093.7	2108	9	15450	1147	15346	-964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTAGCTGGAAACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	59579201	59585508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59579357_59582850_59583018_59585326
ENSMUSG00000032294.18_59579310_59586064_1	chr9	+	450	4	ISM	ENSMUSG00000032294.18	ENST00000389093.7	2108	9	15558	591	15454	-408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCCCTGGCTCTGGATTC	NA	NA	NA	NA	NA	NA	NA	NA	59579309	59586064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59579357_59582850_59583018_59585326_59585509_59586010
ENSMUSG00000032294.18_59582884_59586120_1	chr9	+	426	3	ISM	ENSMUSG00000032294.18	ENST00000389093.7	2108	9	19132	535	19028	-352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGGAGCCCCTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	59582883	59586120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59583018_59585326_59585509_59586010
ENSMUSG00000032294.18_59582922_59586183_1	chr9	+	451	3	ISM	ENSMUSG00000032294.18	ENST00000389093.7	2108	9	19170	472	19066	-289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGCTTGTAGTGCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	59582921	59586183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59583018_59585326_59585509_59586010
ENSMUSG00000032294.18_59585415_59586335_1	chr9	+	419	2	ISM	ENSMUSG00000032294.18	ENSMUST00000163694.4	2041	11	21559	137	21559	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGACTTTATCACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	59585414	59586335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59585509_59586010
ENSMUSG00000032294.18_59585466_59586472_1	chr9	+	505	2	ISM	ENSMUSG00000032294.18	ENSMUST00000163694.4	2041	11	21610	0	21610	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGATGACGACTTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	59585465	59586472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_59585509_59586010
ENSMUSG00000032298.14_57049269_57052269_1	chr9	-	357	4	ISM	ENSMUSG00000032298.14	ENST00000355059.9	1860	6	2060	915	2049	815	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGAGAGGCCATGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	57052269	57049268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57049357_57051470_57051599_57051921_57052022_57052228
ENSMUSG00000032298.14_57051958_57053989_1	chr9	-	353	4	ISM	ENSMUSG00000032298.14	ENSMUST00000034842.5	1170	9	329	1418	329	-1418	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCACTTGGTGCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	57053989	57051957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57052022_57052228_57052293_57052381_57052502_57053884
ENSMUSG00000032298.14_57052006_57054049_1	chr9	-	365	4	ISM	ENSMUSG00000032298.14	ENSMUST00000034842.5	1170	9	269	1466	269	-1466	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCCAGAAGATCAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	57054049	57052005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57052022_57052228_57052293_57052381_57052502_57053884
ENSMUSG00000032298.14_57052470_57054208_1	chr9	-	356	2	ISM	ENSMUSG00000032298.14	ENSMUST00000034842.5	1170	9	110	1930	110	-1930	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGACCGGCCCATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	57054208	57052469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57052502_57053884
ENSMUSG00000032299.11_57062321_57065615_1	chr9	-	854	8	NNC	ENSMUSG00000032299.11	novel	858	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1049	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGGTCTTGCTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	57065615	57062320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063834_57064058_57064125_57064350_57064423_57065555
ENSMUSG00000032299.11_57062321_57065615_2	chr9	-	855	8	NNC	ENSMUSG00000032299.11	novel	858	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1015	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGGTCTTGCTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	57065615	57062320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063804_57063840_57064058_57064125_57064350_57064423_57065555
ENSMUSG00000032299.11_57062321_57065615_3	chr9	-	845	7	NNC	ENSMUSG00000032299.11	novel	858	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGGTCTTGCTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	57065615	57062320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57064033_57064125_57064350_57064423_57065555
ENSMUSG00000032300.8_57160400_57169830_1	chr9	-	4087	3	FSM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	65	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGATCTAGCTTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	57169830	57160399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_57161613_57163668_57166424_57169711
ENSMUSG00000032300.8_57160608_57169885_1	chr9	-	3934	3	FSM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	10	208	-1	-208	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCAGGGACCGGACCCGA	NA	NA	NA	NA	NA	NA	NA	NA	57169885	57160607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_57161613_57163668_57166424_57169711
ENSMUSG00000032301.14_54858074_54863671_1	chr9	+	645	7	ISM	ENSMUSG00000032301.14	ENSMUST00000034848.14	1165	9	0	1643	0	-1426	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATTTTCGTGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	54858073	54863671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_54858188_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540
ENSMUSG00000032301.14_54859624_54865314_1	chr9	+	862	6	FSM	ENSMUSG00000032301.14	ENST00000413382.6	857	6	0	-5	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGTGAAAGGATACTT	NA	NA	NA	NA	NA	NA	NA	NA	54859623	54865314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_54859668_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ENSMUSG00000032301.14_54859974_54864941_1	chr9	+	597	6	ISM	ENSMUSG00000032301.14	ENSMUST00000034848.14	1165	9	1900	373	350	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTGGGAAGACGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	54859973	54864941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ENSMUSG00000032301.14_54859999_54864936_1	chr9	+	443	5	ISM	ENSMUSG00000032301.14	ENST00000558281.5	684	6	375	161	375	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAGAGAGTGGGAAGACG	NA	NA	NA	NA	NA	NA	NA	NA	54859998	54864936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864918
ENSMUSG00000032301.14_54860044_54864975_1	chr9	+	561	6	ISM	ENSMUSG00000032301.14	ENSMUST00000034848.14	1165	9	1970	339	420	-122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAAGTGGAACAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	54860043	54864975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ENSMUSG00000032301.14_54860055_54864983_1	chr9	+	434	5	ISM	ENSMUSG00000032301.14	ENST00000558281.5	684	6	431	114	431	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGAACAGTTGATCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	54860054	54864983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864918
ENSMUSG00000032301.14_54860080_54865040_1	chr9	+	590	6	ISM	ENSMUSG00000032301.14	ENSMUST00000034848.14	1165	9	2006	274	456	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAGAACAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	54860079	54865040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ENSMUSG00000032301.14_54860106_54865034_1	chr9	+	434	5	ISM	ENSMUSG00000032301.14	ENST00000558281.5	684	6	482	63	482	-63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAGAAAGAAAAAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	54860105	54865034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864918
ENSMUSG00000032301.14_54862164_54865115_1	chr9	+	418	3	FSM	ENSMUSG00000032301.14	ENST00000558094.1	459	3	41	0	41	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGAGCTGTCCTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	54862163	54865115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_54862254_54863540_54863672_54864918
ENSMUSG00000032305.16_57444900_57449862_1	chr9	+	797	6	NNC	ENSMUSG00000032305.16	novel	821	7	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1952	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGCCTGCAGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	57444899	57449862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447949_57448099_57449647
ENSMUSG00000032305.16_57444900_57449862_2	chr9	+	819	6	NNC	ENSMUSG00000032305.16	novel	821	7	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2979	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGCCTGCAGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	57444899	57449862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447937_57448099_57449637
ENSMUSG00000032305.16_57444900_57449862_3	chr9	+	809	6	NNC	ENSMUSG00000032305.16	novel	821	7	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3311	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGCCTGCAGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	57444899	57449862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447937_57448099_57449647
ENSMUSG00000032305.16_57444900_57449862_5	chr9	+	807	6	NNC	ENSMUSG00000032305.16	novel	821	7	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGCCTGCAGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	57444899	57449862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447937_57448099_57449649
ENSMUSG00000032306.15_57451348_57459559_1	chr9	-	1597	8	FSM	ENSMUSG00000032306.15	ENST00000352410.9	1597	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCCTGTAGTTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	57459559	57451347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_57451681_57451996_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429
ENSMUSG00000032306.15_57451348_57459559_2	chr9	-	1592	8	NNC	ENSMUSG00000032306.15	novel	1597	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCCTGTAGTTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	57459559	57451347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_57451676_57451996_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429
ENSMUSG00000032306.15_57451539_57459557_1	chr9	-	1720	7	ISM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	489	0	2	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTCAGCCTTTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	57459557	57451538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429
ENSMUSG00000032306.15_57452103_57455835_1	chr9	-	318	3	ISM	ENSMUSG00000032306.15	ENST00000566377.5	1388	7	3724	755	2220	-438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGTGGAGTGCTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	57455835	57452102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57452222_57453676_57453851_57455810
ENSMUSG00000032306.15_57452161_57455888_1	chr9	-	313	3	ISM	ENSMUSG00000032306.15	ENST00000566377.5	1388	7	3671	813	2167	-496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCCAAGGGACAGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	57455888	57452160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57452222_57453676_57453851_57455810
ENSMUSG00000032306.15_57452200_57455960_1	chr9	-	346	3	ISM	ENSMUSG00000032306.15	ENST00000566377.5	1388	7	3599	852	2095	-535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGTCTCAACACTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	57455960	57452199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57452222_57453676_57453851_57455810
ENSMUSG00000032309.16_55116209_55131717_1	chr9	+	2105	7	NNC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1049	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	55116208	55131717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128465_55130523
ENSMUSG00000032309.16_55116209_55131717_2	chr9	+	2104	7	NNC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1068	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	55116208	55131717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_55116473_55116636_55116776_55121192_55121281_55122194_55122283_55125598_55125764_55128305_55128472_55130523
ENSMUSG00000032312.8_57534196_57537557_1	chr9	-	1406	9	ISM	ENSMUSG00000032312.8	ENSMUST00000217314.2	2162	13	3793	266	3793	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGAATCTTATTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	57537557	57534195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450
ENSMUSG00000032312.8_57534298_57537616_1	chr9	-	1363	9	ISM	ENSMUSG00000032312.8	ENSMUST00000217314.2	2162	13	3734	368	3734	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTTTCCTTTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	57537616	57534297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450
ENSMUSG00000032312.8_57534412_57538036_1	chr9	-	1377	10	ISM	ENSMUSG00000032312.8	ENSMUST00000217314.2	2162	13	3314	482	3314	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATAGGGCTTGGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	57538036	57534411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962
ENSMUSG00000032312.8_57534601_57552392_1	chr9	-	1533	13	FSM	ENSMUSG00000032312.8	ENSMUST00000034863.8	2749	13	544	672	514	-385	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTCCGCCAAGGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	57552392	57534600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57552277
ENSMUSG00000032312.8_57534728_57552900_1	chr9	-	1397	14	FSM	ENSMUSG00000032312.8	ENST00000439220.6	1915	14	6	512	6	-512	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCCGCCCGCAGTCTACG	NA	NA	NA	NA	NA	NA	NA	NA	57552900	57534727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57552277_57552331_57552847
ENSMUSG00000032314.15_55361792_55419404_1	chr9	-	1262	12	NNC	ENSMUSG00000032314.15	novel	1392	12	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACTATCAGAAACATGC	NA	NA	NA	NA	NA	NA	NA	NA	55419404	55361791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394081_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
ENSMUSG00000032314.15_55361792_55419404_2	chr9	-	1269	12	FSM	ENSMUSG00000032314.15	ENSMUST00000034866.9	1392	12	123	0	-45	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACTATCAGAAACATGC	NA	NA	NA	NA	NA	NA	NA	NA	55419404	55361791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
ENSMUSG00000032314.15_55361792_55419447_1	chr9	-	1305	12	NNC	ENSMUSG00000032314.15	novel	1392	12	NA	NA	80	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACTATCAGAAACATGC	NA	NA	NA	NA	NA	NA	NA	NA	55419447	55361791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394081_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
ENSMUSG00000032315.7_57607445_57609261_1	chr9	+	983	3	ISM	ENSMUSG00000032315.7	ENST00000395049.8	1431	5	40	875	40	-875	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGGTGACTCCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	57607444	57609261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57608211_57608957_57609085_57609171
ENSMUSG00000032315.7_57607593_57609478_1	chr9	+	959	4	ISM	ENSMUSG00000032315.7	ENST00000395049.8	1431	5	188	658	188	-658	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGACCATAGATCCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	57607592	57609478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57608211_57608957_57609085_57609171_57609262_57609354
ENSMUSG00000032315.7_57607861_57610136_1	chr9	+	969	5	NNC	ENSMUSG00000032315.7	novel	1431	5	NA	NA	456	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	899	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCCTCAGCATCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	57607860	57610136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_57608211_57608957_57609085_57609171_57609262_57609360_57609479_57609852
ENSMUSG00000032315.7_57607923_57610136_1	chr9	+	913	5	FSM	ENSMUSG00000032315.7	ENST00000395049.8	1431	5	518	0	518	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCCTCAGCATCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	57607922	57610136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_57608211_57608957_57609085_57609171_57609262_57609354_57609479_57609852
ENSMUSG00000032316.9_57657995_57662604_1	chr9	-	1126	8	ISM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	10539	3	10539	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCCCTGGTACCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	57662604	57657994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534
ENSMUSG00000032316.9_57658358_57668122_1	chr9	-	990	11	ISM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	5021	366	5021	-366	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGGAGGATGTTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	57668122	57658357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106
ENSMUSG00000032316.9_57659076_57668274_1	chr9	-	1039	10	ISM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	4869	1084	4869	-1084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATGAGAACAGCTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	57668274	57659075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106
ENSMUSG00000032316.9_57659964_57669047_1	chr9	-	986	9	ISM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	4096	1972	4096	-1972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTGAGTACTACCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	57669047	57659963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998
ENSMUSG00000032316.9_57660632_57672388_1	chr9	-	996	9	ISM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	755	2640	755	-2640	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGCCACGTTTGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	57672388	57660631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
ENSMUSG00000032316.9_57661857_57672585_1	chr9	-	974	7	ISM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	558	3865	558	-3865	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAACTTCCAGCCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	57672585	57661856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
ENSMUSG00000032316.9_57661857_57672640_1	chr9	-	1029	7	ISM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	503	3865	503	-3865	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAACTTCCAGCCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	57672640	57661856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
ENSMUSG00000032316.9_57662579_57672744_1	chr9	-	994	6	ISM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	399	4587	399	-4587	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTTCTCAAGAAAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	57672744	57662578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
ENSMUSG00000032316.9_57662635_57672795_1	chr9	-	989	6	ISM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	348	4643	348	-4643	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGAAGATCATCCGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	57672795	57662634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
ENSMUSG00000032316.9_57668276_57673143_1	chr9	-	987	3	ISM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	0	10284	0	-10284	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATACGTATCGGTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	57673143	57668275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57668324_57668998_57669151_57672356
ENSMUSG00000032318.13_55448491_55453062_1	chr9	+	1393	6	FSM	ENSMUSG00000032318.13	ENSMUST00000034869.11	1854	6	59	402	59	-402	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGGGACATTCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	55448490	55453062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_55448623_55449383_55449574_55449680_55449944_55451359_55451644_55452224_55452393_55452706
ENSMUSG00000032318.13_55448491_55453113_1	chr9	+	1444	6	FSM	ENSMUSG00000032318.13	ENSMUST00000034869.11	1854	6	59	351	59	-351	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAACTGTCACTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	55448490	55453113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_55448623_55449383_55449574_55449680_55449944_55451359_55451644_55452224_55452393_55452706
ENSMUSG00000032318.13_55449620_55453334_1	chr9	+	1404	4	ISM	ENSMUSG00000032318.13	ENSMUST00000034869.11	1854	6	1188	130	1188	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTTTAAATTATCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	55449619	55453334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_55449944_55451359_55451644_55452224_55452393_55452706
ENSMUSG00000032318.13_55449754_55453464_1	chr9	+	1400	4	ISM	ENSMUSG00000032318.13	ENSMUST00000034869.11	1854	6	1322	0	1322	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCGCGCCTGTGTGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	55449753	55453464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_55449944_55451359_55451644_55452224_55452393_55452706
ENSMUSG00000032320.8_55949141_55966363_1	chr9	+	2020	7	NNC	ENSMUSG00000032320.8	novel	2024	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCACCTGAGACATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55949140	55966363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_55949483_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
ENSMUSG00000032322.15_55997260_56032484_1	chr9	+	1147	10	NNC	ENSMUSG00000032322.15	novel	1863	15	NA	NA	-5	-3528	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGTGTCAAGGATGATG	NA	NA	NA	NA	NA	NA	NA	NA	55997259	56032484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_55997729_56021513_56021615_56022346_56022422_56027584_56027620_56027830_56027938_56030042_56030106_56030545_56030645_56031031_56031078_56031877_56031953_56032407
ENSMUSG00000032322.15_55997387_56033243_1	chr9	+	1072	10	NNC	ENSMUSG00000032322.15	novel	1863	15	NA	NA	122	-2769	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTGGAAGGTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	55997386	56033243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_55997729_56021513_56021615_56022346_56022422_56027807_56027938_56030042_56030106_56030545_56030645_56031031_56031078_56031877_56031962_56032407_56032507_56033210
ENSMUSG00000032322.15_55997398_56033291_1	chr9	+	1117	11	ISM	ENSMUSG00000032322.15	ENST00000379595.7	1675	15	133	2721	133	-2721	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGAGAGCCCCCAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	55997397	56033291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_55997729_56021513_56021615_56022346_56022422_56027584_56027620_56027830_56027938_56030042_56030106_56030545_56030645_56031031_56031078_56031877_56031958_56032407_56032507_56033210
ENSMUSG00000032322.15_55997595_56035038_1	chr9	+	1099	14	ISM	ENSMUSG00000032322.15	ENST00000379595.7	1675	15	330	974	330	-974	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCGGAATGAGTTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	55997594	56035038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_55997729_56021513_56021615_56022346_56022422_56027584_56027620_56027830_56027938_56030042_56030106_56030545_56030645_56031031_56031078_56031877_56031958_56032407_56032507_56033210_56033308_56033865_56033957_56034768_56034822_56035019
ENSMUSG00000032322.15_55997657_56035079_1	chr9	+	1078	14	ISM	ENSMUSG00000032322.15	ENST00000379595.7	1675	15	392	933	392	-933	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACCCAGGGAAACCTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	55997656	56035079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_55997729_56021513_56021615_56022346_56022422_56027584_56027620_56027830_56027938_56030042_56030106_56030545_56030645_56031031_56031078_56031877_56031958_56032407_56032507_56033210_56033308_56033865_56033957_56034768_56034822_56035019
ENSMUSG00000032322.15_55997695_56035144_1	chr9	+	1105	14	ISM	ENSMUSG00000032322.15	ENST00000379595.7	1675	15	430	868	430	-868	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGGCTTCCCCTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	55997694	56035144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_55997729_56021513_56021615_56022346_56022422_56027584_56027620_56027830_56027938_56030042_56030106_56030545_56030645_56031031_56031078_56031877_56031958_56032407_56032507_56033210_56033308_56033865_56033957_56034768_56034822_56035019
ENSMUSG00000032322.15_56021560_56035940_1	chr9	+	1093	14	ISM	ENSMUSG00000032322.15	ENST00000379595.7	1675	15	24295	72	24295	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACTGTGGAGCGGAACG	NA	NA	NA	NA	NA	NA	NA	NA	56021559	56035940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_56021615_56022346_56022422_56027584_56027620_56027830_56027938_56030042_56030106_56030545_56030645_56031031_56031078_56031877_56031958_56032407_56032507_56033210_56033308_56033865_56033957_56034768_56034822_56035019_56035145_56035872
ENSMUSG00000032324.12_56043168_56068204_1	chr9	-	1573	7	NNC	ENSMUSG00000032324.12	novel	1716	7	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4083	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTACATTTTAATTATT	NA	NA	NA	NA	NA	NA	NA	NA	56068204	56043167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053894_56054369_56054445_56054670_56054863_56068083
ENSMUSG00000032324.12_56043168_56068204_2	chr9	-	1579	7	FSM	ENSMUSG00000032324.12	ENSMUST00000034876.10	1716	7	137	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTACATTTTAATTATT	NA	NA	NA	NA	NA	NA	NA	NA	56068204	56043167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068083
ENSMUSG00000032324.12_56043557_56068204_1	chr9	-	923	5	FSM	ENSMUSG00000032324.12	ENST00000559494.1	1280	5	22	335	22	319	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGACGCCAGCTGTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	56068204	56043556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56068083
ENSMUSG00000032327.15_58042411_58048540_1	chr9	+	752	4	FSM	ENSMUSG00000032327.15	ENST00000432245.6	766	4	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCCTGCCTGACTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	58042410	58048540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_58042492_58046592_58046725_58047696_58047837_58048141
ENSMUSG00000032327.15_58046593_58048540_1	chr9	+	665	3	NNC	ENSMUSG00000032327.15	novel	766	4	NA	NA	4196	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCCTGCCTGACTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	58046592	58048540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_58046725_58047696_58047831_58048141
ENSMUSG00000032327.15_58046593_58048540_2	chr9	+	671	3	ISM	ENSMUSG00000032327.15	ENST00000432245.6	766	4	4196	0	4196	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCCTGCCTGACTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	58046592	58048540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_58046725_58047696_58047837_58048141
ENSMUSG00000032328.13_79676225_79700712_1	chr9	-	3650	7	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGTGCTGTTTATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	79700712	79676224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_79678762_79681374_79681585_79682391_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ENSMUSG00000032328.13_79676225_79700712_2	chr9	-	3650	7	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGTGCTGTTTATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	79700712	79676224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683515_79684505_79684614_79687822_79687931_79700255
ENSMUSG00000032329.5_56381884_56397230_1	chr9	+	871	7	ISM	ENSMUSG00000032329.5	ENSMUST00000215269.2	1700	9	55956	379	55770	-335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATCGTTAAGCGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	56381883	56397230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105
ENSMUSG00000032329.5_56384588_56397437_1	chr9	+	880	6	ISM	ENSMUSG00000032329.5	ENSMUST00000215269.2	1700	9	58660	172	58474	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGTGTTAGGCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	56384587	56397437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105
ENSMUSG00000032329.5_56395971_56403862_1	chr9	+	2332	3	ISM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	70078	358	69857	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAACACAGAAGAGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	56395970	56403862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_56396114_56397105_56397249_56401816
ENSMUSG00000032330.8_79662643_79667160_1	chr9	-	653	4	NNC	ENSMUSG00000032330.8	novel	659	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTCAGCAGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	79667160	79662642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_79662882_79663558_79663644_79665771_79665862_79666921
ENSMUSG00000032330.8_79662643_79667160_2	chr9	-	652	4	NNC	ENSMUSG00000032330.8	novel	659	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTCAGCAGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	79667160	79662642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_79662888_79663558_79663644_79665778_79665862_79666921
ENSMUSG00000032333.7_58160447_58169199_1	chr9	+	1380	7	FSM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	0	604	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGGGCCATGGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	58160446	58169199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_58160683_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ENSMUSG00000032333.7_58160475_58168980_1	chr9	+	983	6	FSM	ENSMUSG00000032333.7	ENST00000564777.5	1151	6	-51	219	28	-219	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGATGGCTGAAGCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	58160474	58168980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_58160683_58162216_58162324_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ENSMUSG00000032333.7_58160601_58169028_1	chr9	+	905	6	FSM	ENSMUSG00000032333.7	ENST00000564777.5	1151	6	75	171	75	-171	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTAGGGGCCTACATGA	NA	NA	NA	NA	NA	NA	NA	NA	58160600	58169028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_58160683_58162216_58162324_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ENSMUSG00000032333.7_58160650_58169168_1	chr9	+	996	6	FSM	ENSMUSG00000032333.7	ENST00000564777.5	1151	6	124	31	124	-31	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGAGAAGCCTCTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	58160649	58169168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_58160683_58162216_58162324_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ENSMUSG00000032333.7_58162124_58169326_1	chr9	+	1364	6	ISM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	1677	477	1598	127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACAGGCCTTTGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	58162123	58169326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ENSMUSG00000032333.7_58162230_58169427_1	chr9	+	1359	6	ISM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	1783	376	1704	228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGACCGACCGGAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	58162229	58169427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ENSMUSG00000032333.7_58162298_58169466_1	chr9	+	1330	6	ISM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	1851	337	1772	267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGCAGCATGTGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	58162297	58169466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ENSMUSG00000032333.7_58163945_58169569_1	chr9	+	1385	5	ISM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	3498	234	3419	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGCTGATCCAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	58163944	58169569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ENSMUSG00000032333.7_58164008_58169607_1	chr9	+	1360	5	ISM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	3561	196	3482	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGGGAGGGCATGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	58164007	58169607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ENSMUSG00000032333.7_58164365_58169803_1	chr9	+	1430	4	ISM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	3918	0	3839	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGTGCAGCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	58164364	58169803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_58164508_58167509_58167706_58168080_58168297_58168928
ENSMUSG00000032334.11_58195021_58219069_1	chr9	-	1891	7	NNC	ENSMUSG00000032334.11	novel	3297	7	NA	NA	1400	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGCAAAGCTACTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	58219069	58195020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_58196201_58198037_58198154_58199851_58199948_58200855_58201013_58201641_58201780_58204903_58205013_58218974
ENSMUSG00000032334.11_58195021_58219081_1	chr9	-	1904	7	NNC	ENSMUSG00000032334.11	novel	3297	7	NA	NA	1388	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGCAAAGCTACTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	58219081	58195020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_58196201_58198037_58198154_58199851_58199948_58200855_58201013_58201641_58201775_58204903_58205013_58218968
ENSMUSG00000032334.11_58195296_58219247_1	chr9	-	1795	7	NNC	ENSMUSG00000032334.11	novel	3297	7	NA	NA	1222	-275	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCACTATCCTTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	58219247	58195295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_58196201_58198042_58198154_58199851_58199948_58200855_58201013_58201641_58201780_58204903_58205013_58218968
ENSMUSG00000032334.11_58195323_58219279_1	chr9	-	1798	7	NNC	ENSMUSG00000032334.11	novel	3297	7	NA	NA	1190	-302	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTAGGGAGTGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	58219279	58195322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_58196201_58198037_58198154_58199851_58199948_58200855_58201013_58201648_58201780_58204903_58205013_58218968
ENSMUSG00000032334.11_58195897_58219881_1	chr9	-	1833	7	FSM	ENSMUSG00000032334.11	ENSMUST00000061799.10	3297	7	588	876	588	-876	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCTGGAGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	58219881	58195896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_58196201_58198037_58198154_58199851_58199948_58200855_58201013_58201641_58201780_58204903_58205013_58218968
ENSMUSG00000032334.11_58198036_58220137_1	chr9	-	1787	6	ISM	ENSMUSG00000032334.11	ENSMUST00000061799.10	3297	7	332	3015	332	-3015	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTTTGCTCAGCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	58220137	58198035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58198154_58199851_58199948_58200855_58201013_58201641_58201780_58204903_58205013_58218968
ENSMUSG00000032334.11_58198129_58220252_1	chr9	-	1809	6	ISM	ENSMUSG00000032334.11	ENSMUST00000061799.10	3297	7	217	3108	217	-3108	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGAGTCTGACTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	58220252	58198128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58198154_58199851_58199948_58200855_58201013_58201641_58201780_58204903_58205013_58218968
ENSMUSG00000032334.11_58199926_58220469_1	chr9	-	1927	5	ISM	ENSMUSG00000032334.11	ENSMUST00000061799.10	3297	7	0	4905	0	-4905	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACATACAATGCGGACATT	NA	NA	NA	NA	NA	NA	NA	NA	58220469	58199925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58199948_58200855_58201013_58201641_58201780_58204903_58205013_58218968
ENSMUSG00000032336.18_58489575_58560161_4	chr9	+	2017	8	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGAATAATACTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	58489574	58560161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548079_58550811_58551086_58557779_58557802_58558540_58558616_58559141
ENSMUSG00000032336.18_58489575_58560161_5	chr9	+	2018	8	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGAATAATACTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	58489574	58560161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_58489810_58530969_58531133_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559141
ENSMUSG00000032336.18_58489575_58560161_6	chr9	+	2016	8	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGAATAATACTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	58489574	58560161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559149
ENSMUSG00000032340.9_58783733_58785412_1	chr9	-	1010	2	ISM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	158296	-105	158065	105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCTGTCAATGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	58785412	58783732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58784641_58785310
ENSMUSG00000032340.9_58783942_58788051_1	chr9	-	1013	3	ISM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	155657	104	155426	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTGCTGTTTGTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	58788051	58783941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58784641_58785310_58785448_58787874
ENSMUSG00000032340.9_58784106_58791863_1	chr9	-	1047	4	ISM	ENSMUSG00000032340.9	ENST00000558964.5	4474	28	151614	-429	151614	-268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTGACTGTGGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	58791863	58784105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752
ENSMUSG00000032340.9_58784585_58810250_1	chr9	-	1093	9	ISM	ENSMUSG00000032340.9	ENST00000560262.5	4348	28	133227	50	133227	-50	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCTAAATGCCATCACAA	NA	NA	NA	NA	NA	NA	NA	NA	58810250	58784584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58784641_58785310_58785448_58787874_58788139_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58809365_58809399_58810196
ENSMUSG00000032340.9_58787875_58811837_1	chr9	-	1152	8	ISM	ENSMUSG00000032340.9	ENST00000560262.5	4348	28	131640	3340	131640	-3340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAGAGGAGCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	58811837	58787874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58788139_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58809365_58809399_58810196_58810392_58811726
ENSMUSG00000032340.9_58788099_58814073_1	chr9	-	1066	9	ISM	ENSMUSG00000032340.9	ENST00000560262.5	4348	28	129404	3564	129404	-3564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCGTCTCAGACGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	58814073	58788098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58788139_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58809365_58809399_58810196_58810392_58811726_58811835_58813932
ENSMUSG00000032340.9_58791854_58813996_1	chr9	-	1007	9	ISM	ENSMUSG00000032340.9	ENST00000261908.11	7054	29	129610	9737	129481	-7319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTCGCTTCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	58813996	58791853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58809365_58809399_58810196_58810392_58811726_58811835_58813932
ENSMUSG00000032340.9_58795769_58814237_1	chr9	-	1023	9	ISM	ENSMUSG00000032340.9	ENST00000560262.5	4348	28	129240	11234	129240	-11234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGGACAGCATGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	58814237	58795768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58809365_58809399_58810196_58810392_58811726_58811835_58813932_58814072_58814153
ENSMUSG00000032340.9_58796412_58815753_1	chr9	-	1075	9	ISM	ENSMUSG00000032340.9	ENST00000560262.5	4348	28	127724	11877	127724	-11877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTAGAGTTGAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	58815753	58796411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58796504_58801157_58801306_58806447_58806517_58809365_58809399_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814378_58815686
ENSMUSG00000032340.9_58801191_58820549_1	chr9	-	1098	9	ISM	ENSMUSG00000032340.9	ENST00000560262.5	4348	28	122928	16656	122928	-16656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTACCCGGCGCACCACCT	NA	NA	NA	NA	NA	NA	NA	NA	58820549	58801190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58801306_58806447_58806517_58809365_58809399_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814378_58815686_58815783_58820430
ENSMUSG00000032340.9_58810237_58824305_1	chr9	-	1092	8	ISM	ENSMUSG00000032340.9	ENST00000558964.5	4474	28	119172	25702	119172	-25702	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCATGTCTGAAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	58824305	58810236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58810392_58811726_58811835_58813932_58814072_58814153_58814378_58815686_58815783_58820430_58820626_58821536_58821648_58824241
ENSMUSG00000032340.9_58810293_58824354_1	chr9	-	1085	8	ISM	ENSMUSG00000032340.9	ENST00000558964.5	4474	28	119123	25758	119123	-25758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACTTGATACGCCATAC	NA	NA	NA	NA	NA	NA	NA	NA	58824354	58810292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58810392_58811726_58811835_58813932_58814072_58814153_58814378_58815686_58815783_58820430_58820626_58821536_58821648_58824241
ENSMUSG00000032340.9_58810374_58824378_1	chr9	-	1028	8	ISM	ENSMUSG00000032340.9	ENST00000558964.5	4474	28	119099	25839	119099	-25839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACGGATGTGAATGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	58824378	58810373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58810392_58811726_58811835_58813932_58814072_58814153_58814378_58815686_58815783_58820430_58820626_58821536_58821648_58824241
ENSMUSG00000032340.9_58811778_58828499_1	chr9	-	1075	9	ISM	ENSMUSG00000032340.9	ENST00000558964.5	4474	28	114978	27243	114978	-27243	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCATAGTGAATTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	58828499	58811777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58811835_58813932_58814072_58814153_58814378_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444
ENSMUSG00000032340.9_58814028_58829122_1	chr9	-	1080	9	ISM	ENSMUSG00000032340.9	ENST00000558964.5	4474	28	114355	29493	114355	-29493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAATACGCTCTATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	58829122	58814027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58814072_58814153_58814378_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049
ENSMUSG00000032340.9_58814247_58833099_1	chr9	-	1074	9	ISM	ENSMUSG00000032340.9	ENST00000558964.5	4474	28	110378	29712	110378	-29712	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAACTCCCTGCCCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	58833099	58814246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58814378_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044
ENSMUSG00000032340.9_58814293_58833154_1	chr9	-	1083	9	ISM	ENSMUSG00000032340.9	ENST00000558964.5	4474	28	110323	29758	110323	-29758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCTTCCATTCTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	58833154	58814292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58814378_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044
ENSMUSG00000032340.9_58814351_58833199_1	chr9	-	1070	9	ISM	ENSMUSG00000032340.9	ENST00000558964.5	4474	28	110278	29816	110278	-29816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGCTCCATACACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	58833199	58814350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58814378_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044
ENSMUSG00000032340.9_58815719_58838319_1	chr9	-	1092	9	ISM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	105389	31881	105158	-31184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAGAGTGCTGTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	58838319	58815718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238
ENSMUSG00000032340.9_58820486_58863262_1	chr9	-	1073	9	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	80215	-35951	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGACCATCAAAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	58863262	58820485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_-_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241
ENSMUSG00000032340.9_58820540_58863313_1	chr9	-	1070	9	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	80164	-36005	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACATTGTGGTCCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	58863313	58820539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_-_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241
ENSMUSG00000032340.9_58821583_58865264_1	chr9	-	1071	9	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	78213	-37048	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTGATTGGCTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	58865264	58821582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_-_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180
ENSMUSG00000032340.9_58824314_58885976_1	chr9	-	1074	9	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	57501	-39779	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGCCTCCCGAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	58885976	58824313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_-_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907
ENSMUSG00000032340.9_58824358_58886037_1	chr9	-	1091	9	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	57440	-39823	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCACACAAAATGGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	58886037	58824357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_-_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907
ENSMUSG00000032340.9_58828445_58889391_1	chr9	-	1049	8	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	54086	-43910	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTTTTTCCTTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	58889391	58828444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_-_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358
ENSMUSG00000032340.9_58828445_58889514_1	chr9	-	1172	8	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	53963	-43910	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTTTTTCCTTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	58889514	58828444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_-_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358
ENSMUSG00000032340.9_58829049_58892929_1	chr9	-	1078	8	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	50548	-44514	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAGTGCTGATATGATT	NA	NA	NA	NA	NA	NA	NA	NA	58892929	58829048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_-_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883
ENSMUSG00000032340.9_58829101_58892981_1	chr9	-	1078	8	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	50496	-44566	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAAAATTACAAATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	58892981	58829100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_-_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883
ENSMUSG00000032340.9_58829174_58893013_1	chr9	-	1037	8	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	50464	-44639	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCGTGCTTATGCAACGT	NA	NA	NA	NA	NA	NA	NA	NA	58893013	58829173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_-_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883
ENSMUSG00000032340.9_58833045_58893162_1	chr9	-	1161	7	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	50315	-48510	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCTTTCACCTACCTG	NA	NA	NA	NA	NA	NA	NA	NA	58893162	58833044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_-_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883
ENSMUSG00000032340.9_58838352_58897670_1	chr9	-	1087	7	ISM	ENSMUSG00000032340.9	ENST00000558964.5	4474	28	45807	53817	45807	-53817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCTGGTCTCTACTCG	NA	NA	NA	NA	NA	NA	NA	NA	58897670	58838351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473
ENSMUSG00000032340.9_58863242_58897791_1	chr9	-	1161	6	ISM	ENSMUSG00000032340.9	ENST00000558964.5	4474	28	45686	78707	45686	-78707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGGGGAGCAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	58897791	58863241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473
ENSMUSG00000032340.9_58865271_58943364_1	chr9	-	1066	6	ISM	ENSMUSG00000032340.9	ENST00000558964.5	4474	28	113	80736	113	-80736	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGAAGTCACTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	58943364	58865270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ENSMUSG00000032340.9_58889395_58943549_1	chr9	-	1013	4	ISM	ENSMUSG00000032340.9	ENST00000558964.5	4474	28	-72	104860	57	-104860	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGGATGAAAAACGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	58943549	58889394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58889513_58892883_58893160_58897473_58897792_58943248
ENSMUSG00000032342.14_78355490_78365275_1	chr9	+	1292	7	ISM	ENSMUSG00000032342.14	ENST00000415954.6	2072	12	-162	15870	0	-15870	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTGCTGGACAGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	78355489	78365275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198
ENSMUSG00000032342.14_78355707_78368205_1	chr9	+	1220	8	ISM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	217	13229	55	-12940	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGACCTCACTACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	78355706	78368205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114
ENSMUSG00000032342.14_78356712_78368826_1	chr9	+	1262	8	ISM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	1222	12608	1060	-12319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCACAGCGATTTGAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	78356711	78368826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801
ENSMUSG00000032342.14_78356788_78368873_1	chr9	+	1233	8	ISM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	1298	12561	1136	-12272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTATTTCTGTGTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	78356787	78368873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801
ENSMUSG00000032342.14_78356848_78368918_1	chr9	+	1218	8	ISM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	1358	12516	1196	-12227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAGTTAATTCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	78356847	78368918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801
ENSMUSG00000032342.14_78357049_78372222_1	chr9	+	1228	8	ISM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	1559	9212	1397	-8923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGAGCCCTTGGAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	78357048	78372222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165
ENSMUSG00000032342.14_78360245_78381157_1	chr9	+	1269	9	ISM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	4755	277	4593	12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCAGTGACAGAACGCCA	NA	NA	NA	NA	NA	NA	NA	NA	78360244	78381157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
ENSMUSG00000032342.14_78360308_78381202_1	chr9	+	1251	9	ISM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	4818	232	4656	57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCATAGAGGACTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	78360307	78381202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
ENSMUSG00000032342.14_78364730_78381434_1	chr9	+	1310	7	ISM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	9240	0	9078	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTAGGTGATTTTACG	NA	NA	NA	NA	NA	NA	NA	NA	78364729	78381434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
ENSMUSG00000032342.14_78364791_78381434_1	chr9	+	1249	7	ISM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	9301	0	9139	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTAGGTGATTTTACG	NA	NA	NA	NA	NA	NA	NA	NA	78364790	78381434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
ENSMUSG00000032348.7_78099229_78115146_1	chr9	+	616	6	ISM	ENSMUSG00000032348.7	ENSMUST00000034903.7	977	7	0	1485	0	-1485	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAGAAGCCATTTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	78099228	78115146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_78099347_78105551_78105659_78106771_78106824_78111513_78111647_78113193_78113336_78115082
ENSMUSG00000032348.7_78105550_78116435_1	chr9	+	665	6	ISM	ENSMUSG00000032348.7	ENSMUST00000034903.7	977	7	6321	196	6321	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1588	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCAGGACTGTCCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	78105549	78116435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_78105659_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ENSMUSG00000032348.7_78113190_78116631_1	chr9	+	571	3	ISM	ENSMUSG00000032348.7	ENSMUST00000034903.7	977	7	13961	0	13961	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	78113189	78116631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_78113336_78115082_78115215_78116338
ENSMUSG00000032349.14_77824646_77890206_1	chr9	+	1187	8	FSM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	0	1595	0	-1595	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTAGGACCTTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	77824645	77890206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_77824809_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
ENSMUSG00000032349.14_77868185_77890361_1	chr9	+	1076	6	ISM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	43539	1440	43539	-1440	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTATTAGTTGTAACACG	NA	NA	NA	NA	NA	NA	NA	NA	77868184	77890361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
ENSMUSG00000032349.14_77883091_77890546_1	chr9	+	1086	5	ISM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	58445	1255	58445	-1255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGGGTATGTTTCAACTT	NA	NA	NA	NA	NA	NA	NA	NA	77883090	77890546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
ENSMUSG00000032349.14_77884121_77890702_1	chr9	+	1097	4	ISM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	59475	1099	59475	-1099	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGCAGGTTCAAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	77884120	77890702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_77884202_77887106_77887232_77888755_77888891_77889946
ENSMUSG00000032349.14_77887151_77890810_1	chr9	+	1080	3	ISM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	62505	991	62505	-991	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGCGTCTGGAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	77887150	77890810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_77887232_77888755_77888891_77889946
ENSMUSG00000032349.14_77887191_77890872_1	chr9	+	1102	3	ISM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	62545	929	62545	-929	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAGGTCACTTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	77887190	77890872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_77887232_77888755_77888891_77889946
ENSMUSG00000032349.14_77888862_77891031_1	chr9	+	1114	2	ISM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	64216	770	64216	-770	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGGACTGGTTACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	77888861	77891031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_77888891_77889946
ENSMUSG00000032353.10_89581510_89584889_1	chr9	-	588	2	ISM	ENSMUSG00000032353.10	ENSMUST00000058488.9	1346	3	2232	251	2232	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTAGGGTTCTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	89584889	89581509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_89582033_89584824
ENSMUSG00000032353.10_89581827_89586912_1	chr9	-	569	3	FSM	ENSMUSG00000032353.10	ENSMUST00000058488.9	1346	3	209	568	209	-568	multi-exon	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGACCTGTTAACAGAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	89586912	89581826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_89582033_89584824_89585074_89586798
ENSMUSG00000032353.10_89584825_89587121_1	chr9	-	572	2	ISM	ENSMUSG00000032353.10	ENSMUST00000058488.9	1346	3	0	3566	0	-3566	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTGCATGACCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	89587121	89584824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_89585074_89586798
ENSMUSG00000032355.17_77045626_77159123_1	chr9	-	2902	11	NNC	ENSMUSG00000032355.17	novel	2907	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTTTGCTAAAATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	77159123	77045625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_77045839_77072046_77072176_77088587_77088679_77097605_77097666_77097788_77097873_77097953_77098020_77124258_77124331_77136766_77138312_77146669_77147061_77150853_77151010_77159028
ENSMUSG00000032355.17_77045626_77159123_2	chr9	-	2902	11	NNC	ENSMUSG00000032355.17	novel	2907	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTTTGCTAAAATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	77159123	77045625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_77045839_77072046_77072176_77088587_77088679_77097605_77097666_77097788_77097873_77097959_77098020_77124258_77124331_77136766_77138312_77146669_77147067_77150853_77151010_77159028
ENSMUSG00000032355.17_77045626_77159123_3	chr9	-	2908	11	FSM	ENSMUSG00000032355.17	ENST00000502396.6	2907	11	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTTTGCTAAAATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	77159123	77045625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_77045839_77072046_77072176_77088587_77088679_77097605_77097666_77097788_77097873_77097953_77098020_77124258_77124331_77136766_77138312_77146669_77147067_77150853_77151010_77159028
ENSMUSG00000032355.17_77045626_77159123_4	chr9	-	2904	11	NIC	ENSMUSG00000032355.17	novel	2907	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTTTGCTAAAATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	77159123	77045625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_-_77045839_77072046_77072176_77088587_77088679_77097605_77097666_77097788_77097873_77097953_77098020_77124258_77124331_77136766_77138312_77146673_77147067_77150853_77151010_77159028
ENSMUSG00000032355.17_77045626_77159123_5	chr9	-	2901	11	NNC	ENSMUSG00000032355.17	novel	2907	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTTTGCTAAAATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	77159123	77045625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_77045839_77072046_77072176_77088587_77088679_77097605_77097666_77097788_77097873_77097953_77098013_77124258_77124331_77136766_77138312_77146669_77147067_77150853_77151010_77159028
ENSMUSG00000032355.17_77045626_77159123_6	chr9	-	2906	11	NNC	ENSMUSG00000032355.17	novel	2907	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2690	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTTTGCTAAAATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	77159123	77045625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_77045839_77072046_77072176_77088587_77088679_77097605_77097666_77097788_77097873_77097953_77098020_77124258_77124331_77136766_77138312_77146669_77147067_77150853_77151010_77159030
ENSMUSG00000032355.17_77088588_77146739_1	chr9	-	157	2	ISM	ENSMUSG00000032355.17	ENST00000509997.5	582	3	296	16541	296	-16541	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACACATTTTAAATGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	77146739	77088587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_77088679_77146673
ENSMUSG00000032356.13_89792225_89833027_1	chr9	+	427	4	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	444	70461	263	35127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGACAGTGACATCAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	89792224	89833027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89792327_89806113_89806224_89826778_89826927_89832960
ENSMUSG00000032356.13_89806145_89836015_1	chr9	+	429	4	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	14364	67473	14183	38115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTCAGCATGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	89806144	89836015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89806224_89826778_89826927_89832960_89833057_89835909
ENSMUSG00000032356.13_89826900_89849948_1	chr9	+	422	4	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	35119	53540	34938	52048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGTATCTCCAGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	89826899	89849948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89826927_89832960_89833057_89835909_89836164_89849903
ENSMUSG00000032356.13_89833018_89852479_1	chr9	+	447	4	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	41237	51009	41056	-51009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATCCTTGCTCACTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	89833017	89852479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89833057_89835909_89836164_89849903_89849984_89852405
ENSMUSG00000032356.13_89836007_89853043_1	chr9	+	444	4	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	44226	50445	44045	-50445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGACACTCCATGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	89836006	89853043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89836164_89849903_89849984_89852405_89852600_89853030
ENSMUSG00000032356.13_89836065_89853088_1	chr9	+	431	4	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	44284	50400	44103	-50400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCGCAACAGCCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	89836064	89853088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89836164_89849903_89849984_89852405_89852600_89853030
ENSMUSG00000032356.13_89836133_89853140_1	chr9	+	415	4	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	44352	50348	44171	-50348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCCCAGCCACGGTG	NA	NA	NA	NA	NA	NA	NA	NA	89836132	89853140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89836164_89849903_89849984_89852405_89852600_89853030
ENSMUSG00000032356.13_89852496_89858830_1	chr9	+	427	4	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	60715	44658	60534	-44658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATTCTCCAAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	89852495	89858830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89852600_89853030_89853141_89856817_89856937_89858736
ENSMUSG00000032356.13_89852543_89858886_1	chr9	+	436	4	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	60762	44602	60581	-44602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAACCAAGGTAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	89852542	89858886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89852600_89853030_89853141_89856817_89856937_89858736
ENSMUSG00000032356.13_89853095_89863709_1	chr9	+	446	5	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	61314	39779	61133	-39779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACTCCCTACCCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	89853094	89863709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89853141_89856817_89856937_89858736_89858898_89862799_89862864_89863653
ENSMUSG00000032356.13_89856919_89866371_1	chr9	+	433	5	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	65138	37117	64957	-37117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGGTCACCGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	89856918	89866371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89856937_89858736_89858898_89862799_89862864_89863653_89863791_89866318
ENSMUSG00000032356.13_89858806_89873617_1	chr9	+	463	5	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	67025	29871	66844	-29871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCGTGGAGCGCCTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	89858805	89873617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89858898_89862799_89862864_89863653_89863791_89866318_89866402_89873530
ENSMUSG00000032356.13_89858871_89873667_1	chr9	+	448	5	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	67090	29821	66909	-29821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTTTCTCAACACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	89858870	89873667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89858898_89862799_89862864_89863653_89863791_89866318_89866402_89873530
ENSMUSG00000032356.13_89863753_89876774_1	chr9	+	421	4	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	71972	26714	71791	-26714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCCCTAAGTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	89863752	89876774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89863791_89866318_89866402_89873530_89873780_89876723
ENSMUSG00000032356.13_89873595_89876996_1	chr9	+	458	2	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	81814	26492	81633	-26492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTCTGTATGGCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	89873594	89876996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89873780_89876723
ENSMUSG00000032356.13_89876812_89882793_1	chr9	+	439	3	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	85031	20695	84850	-20695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCTGATGACCACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	89876811	89882793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89877101_89880719_89880843_89882766
ENSMUSG00000032356.13_89876873_89882846_1	chr9	+	431	3	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	85092	20642	84911	-20642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTACTTCTGCCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	89876872	89882846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89877101_89880719_89880843_89882766
ENSMUSG00000032356.13_89876980_89883874_1	chr9	+	435	4	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	85199	19614	85018	-19614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATATCGACAAGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	89876979	89883874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89877101_89880719_89880843_89882766_89882941_89883857
ENSMUSG00000032356.13_89877041_89883939_1	chr9	+	439	4	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	85260	19549	85079	-19549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGGGTCACCAAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	89877040	89883939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89877101_89880719_89880843_89882766_89882941_89883857
ENSMUSG00000032356.13_89882864_89891390_1	chr9	+	423	5	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	91083	12098	90902	-12098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGGATCACCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	89882863	89891390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89882941_89883857_89883965_89884404_89884518_89886894_89886956_89891325
ENSMUSG00000032356.13_89883890_89892518_1	chr9	+	424	5	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	92109	10970	91928	-10970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTTCAACCATGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	89883889	89892518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89883965_89884404_89884518_89886894_89886956_89891325_89891430_89892447
ENSMUSG00000032356.13_89884436_89894923_1	chr9	+	443	5	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	92655	8565	92474	-8565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATGCTGTGCTGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	89884435	89894923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89884518_89886894_89886956_89891325_89891430_89892447_89892533_89894812
ENSMUSG00000032356.13_89884477_89894985_1	chr9	+	464	5	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	92696	8503	92515	-8503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGCTCAAAGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	89884476	89894985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89884518_89886894_89886956_89891325_89891430_89892447_89892533_89894812
ENSMUSG00000032356.13_89891362_89899158_1	chr9	+	421	4	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	99581	4330	99400	-4330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAGAAAGTAAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	89891361	89899158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89891430_89892447_89892533_89894812_89895011_89899088
ENSMUSG00000032356.13_89894813_89903484_1	chr9	+	465	4	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	103032	4	102851	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGGTCTCTCCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	89894812	89903484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89895011_89899088_89899169_89902365_89902484_89903415
ENSMUSG00000032359.15_89936320_89949127_1	chr9	+	873	8	ISM	ENSMUSG00000032359.15	ENSMUST00000034915.15	1617	12	0	9015	0	-9015	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGAAGAAGACAGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	89936319	89949127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89936688_89942531_89942564_89943571_89943678_89944769_89944841_89946205_89946311_89946559_89946647_89947444_89947501_89949079
ENSMUSG00000032359.15_89936607_89956973_1	chr9	+	849	11	ISM	ENSMUSG00000032359.15	ENSMUST00000034915.15	1617	12	287	1169	287	-1169	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATGGAGAACAGAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	89936606	89956973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89936688_89942531_89942564_89943571_89943678_89944769_89944841_89946205_89946311_89946559_89946647_89947444_89947501_89949079_89949162_89950457_89950527_89953871_89953979_89956920
ENSMUSG00000032359.15_89943618_89957807_1	chr9	+	836	10	ISM	ENSMUSG00000032359.15	ENSMUST00000034915.15	1617	12	7298	335	7298	-335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCACGGCTGCACGGGC	NA	NA	NA	NA	NA	NA	NA	NA	89943617	89957807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89943678_89944769_89944841_89946205_89946311_89946559_89946647_89947444_89947501_89949079_89949162_89950457_89950527_89953871_89953979_89956920_89957047_89957734
ENSMUSG00000032359.15_89944823_89957945_1	chr9	+	861	9	ISM	ENSMUSG00000032359.15	ENSMUST00000034915.15	1617	12	8503	197	8503	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGGACAAACTTGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	89944822	89957945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89944841_89946205_89946311_89946559_89946647_89947444_89947501_89949079_89949162_89950457_89950527_89953871_89953979_89956920_89957047_89957734
ENSMUSG00000032363.16_90053637_90060241_1	chr9	+	711	5	ISM	ENSMUSG00000032363.16	ENST00000388820.5	5114	23	99	21906	99	-21802	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGAACTTCTGTAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	90053636	90060241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205
ENSMUSG00000032363.16_90053760_90061400_1	chr9	+	702	6	ISM	ENSMUSG00000032363.16	ENST00000388820.5	5114	23	222	20747	222	-20643	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCATGTGAAACCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	90053759	90061400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375
ENSMUSG00000032363.16_90053807_90061454_1	chr9	+	709	6	ISM	ENSMUSG00000032363.16	ENST00000388820.5	5114	23	269	20693	269	-20589	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGTAGCGTCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	90053806	90061454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375
ENSMUSG00000032363.16_90053851_90061511_1	chr9	+	722	6	ISM	ENSMUSG00000032363.16	ENST00000388820.5	5114	23	313	20636	313	-20532	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTAGGACACAGGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	90053850	90061511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375
ENSMUSG00000032363.16_90055688_90082043_1	chr9	+	4316	19	FSM	ENSMUSG00000032363.16	ENST00000613213.4	4431	19	11	104	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCACGGTGGCAGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	90055687	90082043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_90055841_90059835_90059920_90060205_90060331_90067654_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90074951_90076327_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ENSMUSG00000032363.16_90055727_90062745_1	chr9	+	720	6	ISM	ENSMUSG00000032363.16	ENST00000388820.5	5114	23	2189	19402	50	-19298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACAGCTCCTGTATGAC	NA	NA	NA	NA	NA	NA	NA	NA	90055726	90062745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062677
ENSMUSG00000032363.16_90055744_90082043_1	chr9	+	4260	19	FSM	ENSMUSG00000032363.16	ENST00000613213.4	4431	19	67	104	67	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCACGGTGGCAGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	90055743	90082043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_90055841_90059835_90059920_90060205_90060331_90067654_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90074951_90076327_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ENSMUSG00000032363.16_90055744_90082043_2	chr9	+	4259	19	NNC	ENSMUSG00000032363.16	novel	4431	19	NA	NA	67	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	3478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCACGGTGGCAGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	90055743	90082043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_90055841_90059835_90059920_90060205_90060331_90067654_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070712_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90074951_90076327_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ENSMUSG00000032363.16_90055784_90062801_1	chr9	+	719	6	ISM	ENSMUSG00000032363.16	ENST00000388820.5	5114	23	2246	19346	107	-19242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACATCACCAGGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	90055783	90062801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062677
ENSMUSG00000032363.16_90055805_90082095_1	chr9	+	4251	19	FSM	ENSMUSG00000032363.16	ENST00000613213.4	4431	19	128	52	128	-52	multi-exon	FALSE	canonical	NA	NA	NA	NA	3821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTAACAGTTTGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	90055804	90082095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_90055841_90059835_90059920_90060205_90060331_90067654_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90074951_90076327_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ENSMUSG00000032363.16_90056597_90067883_1	chr9	+	708	6	ISM	ENSMUSG00000032363.16	ENST00000388820.5	5114	23	3059	14264	920	-14160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCGCCTTCAGTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	90056596	90067883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062677_90062825_90067788
ENSMUSG00000032363.16_90060250_90069062_1	chr9	+	704	6	ISM	ENSMUSG00000032363.16	ENST00000388820.5	5114	23	6712	13085	4573	-12981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGAGGAGCTGTGGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	90060249	90069062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_90060331_90061375_90061526_90062677_90062825_90067788_90067934_90068512_90068606_90068974
ENSMUSG00000032363.16_90061404_90070402_1	chr9	+	734	6	ISM	ENSMUSG00000032363.16	ENSMUST00000147250.8	4833	25	16149	11641	5727	-11641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCTTTCCGTCACACCC	NA	NA	NA	NA	NA	NA	NA	NA	90061403	90070402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_90061526_90062677_90062825_90067788_90067934_90068512_90068606_90068974_90069121_90070321
ENSMUSG00000032363.16_90061447_90070466_1	chr9	+	755	6	ISM	ENSMUSG00000032363.16	ENSMUST00000147250.8	4833	25	16192	11577	5770	-11577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTGCCTGTGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	90061446	90070466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_90061526_90062677_90062825_90067788_90067934_90068512_90068606_90068974_90069121_90070321
ENSMUSG00000032363.16_90062748_90070786_1	chr9	+	706	6	ISM	ENSMUSG00000032363.16	ENSMUST00000147250.8	4833	25	17493	11257	7071	-11257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCCTTGCTACCAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	90062747	90070786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_90062825_90067788_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070711
ENSMUSG00000032363.16_90075665_90077273_1	chr9	+	721	2	ISM	ENSMUSG00000032363.16	ENST00000388820.5	5114	23	22127	4874	19988	-4770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACTGCACCCTCGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	90075664	90077273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_90076323_90077210
ENSMUSG00000032363.16_90075793_90077814_1	chr9	+	768	3	ISM	ENSMUSG00000032363.16	ENST00000388820.5	5114	23	22255	4333	20116	-4229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCAGCCCGGGCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	90075792	90077814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_90076323_90077210_90077364_90077729
ENSMUSG00000032363.16_90075863_90077846_1	chr9	+	730	3	ISM	ENSMUSG00000032363.16	ENST00000388820.5	5114	23	22325	4301	20186	-4197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAGCTCTGTGGGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	90075862	90077846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_90076323_90077210_90077364_90077729
ENSMUSG00000032363.16_90075993_90078031_1	chr9	+	705	4	ISM	ENSMUSG00000032363.16	ENST00000388820.5	5114	23	22455	4116	20316	-4012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGCCAGGGCTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	90075992	90078031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_90076323_90077210_90077364_90077729_90077904_90077983
ENSMUSG00000032363.16_90076042_90078089_1	chr9	+	714	4	ISM	ENSMUSG00000032363.16	ENST00000388820.5	5114	23	22504	4058	20365	-3954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCCCTGCACACAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	90076041	90078089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_90076323_90077210_90077364_90077729_90077904_90077983
ENSMUSG00000032363.16_90077982_90082153_1	chr9	+	699	3	ISM	ENSMUSG00000032363.16	ENST00000613213.4	4431	19	22305	-6	22305	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGTTTGGCCTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	90077981	90082153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_90078131_90079052_90079216_90081766
ENSMUSG00000032366.16_66929875_66939308_1	chr9	-	1058	4	ISM	ENSMUSG00000032366.16	ENSMUST00000113695.8	1607	8	11776	1	11683	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTGGTCCTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	66939308	66929874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232
ENSMUSG00000032366.16_66929875_66956425_1	chr9	-	1632	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113705.8	1759	9	124	3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTGGTCCTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	66956425	66929874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955405_66955532_66956300
ENSMUSG00000032366.16_66930166_66950995_1	chr9	-	1226	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113695.8	1607	8	89	292	0	-269	multi-exon	FALSE	canonical	NA	NA	NA	NA	2785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATATGGGGTTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	66950995	66930165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ENSMUSG00000032366.16_66930280_66950995_1	chr9	-	1112	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113695.8	1607	8	89	406	0	-383	multi-exon	FALSE	canonical	NA	NA	NA	NA	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGATTGGTGCTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	66950995	66930279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ENSMUSG00000032366.16_66930280_66951123_1	chr9	-	1240	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113695.8	1607	8	-39	406	0	-383	multi-exon	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGATTGGTGCTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	66951123	66930279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ENSMUSG00000032366.16_66930280_66955193_1	chr9	-	1102	8	ISM	ENSMUSG00000032366.16	ENSMUST00000034928.12	1824	10	1298	405	1232	-383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGATTGGTGCTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	66955193	66930279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067
ENSMUSG00000032366.16_66930369_66941249_1	chr9	-	727	6	ISM	ENSMUSG00000032366.16	ENSMUST00000113696.8	1714	8	9940	497	9742	-472	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTAGGAAGCCTCATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	66941249	66930368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157
ENSMUSG00000032366.16_66930504_66956468_1	chr9	-	1046	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113707.9	1898	9	220	632	-14	-607	multi-exon	FALSE	canonical	NA	NA	NA	NA	4076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGCCAGCTAGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	66956468	66930503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUSG00000032366.16_66930558_66956484_1	chr9	-	1008	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113707.9	1898	9	204	686	-1	-661	multi-exon	FALSE	canonical	NA	NA	NA	NA	3017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAATGCGTTTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	66956484	66930557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUSG00000032366.16_66930619_66956549_1	chr9	-	1012	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113707.9	1898	9	139	747	0	-722	multi-exon	FALSE	canonical	NA	NA	NA	NA	3289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTCCCCCTCCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	66956549	66930618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUSG00000032366.16_66936130_66956425_1	chr9	-	1678	9	FSM	ENSMUSG00000032366.16	ENSMUST00000030185.5	1797	9	119	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGGAAGTTAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	66956425	66936129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUSG00000032366.16_66936751_66950995_1	chr9	-	942	8	FSM	ENSMUSG00000032366.16	ENST00000558910.3	942	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATCCTTTTATTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	66950995	66936750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ENSMUSG00000032366.16_66938311_66956688_1	chr9	-	1046	8	ISM	ENSMUSG00000032366.16	ENSMUST00000030185.5	1797	9	-144	2181	0	-1560	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATCTTTAATATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	66956688	66938310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUSG00000032369.14_92131988_92145189_1	chr9	+	638	4	ISM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	185	9142	185	-8839	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGGTGGTGGCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	92131987	92145189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085
ENSMUSG00000032369.14_92132042_92145241_1	chr9	+	636	4	ISM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	239	9090	239	-8787	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATCCAGGTGGGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	92132041	92145241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085
ENSMUSG00000032369.14_92132110_92145301_1	chr9	+	628	4	ISM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	307	9030	-285	-8727	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCACCGGGGCTGGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	92132109	92145301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085
ENSMUSG00000032369.14_92132252_92148538_1	chr9	+	653	6	ISM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	449	5793	-143	-5490	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAACTGCTGTGGGGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	92132251	92148538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443
ENSMUSG00000032369.14_92132395_92148639_1	chr9	+	611	6	ISM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	592	5692	0	-5389	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTCCCCTGCTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	92132394	92148639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443
ENSMUSG00000032374.15_92424276_92473454_1	chr9	+	1116	8	ISM	ENSMUSG00000032374.15	ENSMUST00000070522.14	3649	19	0	17027	0	-17019	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGGATTTATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	92424275	92473454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352
ENSMUSG00000032374.15_92424418_92475867_1	chr9	+	1044	9	ISM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	101	14606	101	-14606	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTTAACACTGGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	92424417	92475867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797
ENSMUSG00000032374.15_92424529_92477362_1	chr9	+	1037	10	ISM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	212	13111	212	-13111	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGACATCAGCTCTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	92424528	92477362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314
ENSMUSG00000032374.15_92453325_92478434_1	chr9	+	1047	10	ISM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	29008	12039	29008	-12039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGATGTTGTTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	92453324	92478434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388
ENSMUSG00000032374.15_92455536_92480672_1	chr9	+	1051	10	ISM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	31219	9801	31219	-9801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTTGTGGTCCAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	92455535	92480672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640
ENSMUSG00000032374.15_92455641_92480725_1	chr9	+	999	10	ISM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	31324	9748	31324	-9748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTCTGAAGATTACGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	92455640	92480725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640
ENSMUSG00000032374.15_92463324_92482915_1	chr9	+	1073	10	ISM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	39007	7558	39007	-7558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGCAATGCTAGAGATATG	NA	NA	NA	NA	NA	NA	NA	NA	92463323	92482915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793
ENSMUSG00000032374.15_92468891_92485114_1	chr9	+	1063	10	ISM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	44574	5359	44574	-5359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTCGTGTTCAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	92468890	92485114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92484037_92484101_92485000
ENSMUSG00000032374.15_92473351_92487530_1	chr9	+	1073	10	ISM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	49034	2943	49034	-2943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTGTCATTTGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	92473350	92487530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92484037_92484101_92485000_92485115_92486831_92486898_92487425
ENSMUSG00000032374.15_92475835_92488660_1	chr9	+	1032	10	ISM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	51518	1813	51518	-1813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGCTCCAGTCACACTG	NA	NA	NA	NA	NA	NA	NA	NA	92475834	92488660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92484037_92484101_92485000_92485115_92486831_92486898_92487425_92487531_92488560
ENSMUSG00000032374.15_92477398_92488942_1	chr9	+	1033	10	ISM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	53081	1531	53081	-1531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATTATGACAAACATATG	NA	NA	NA	NA	NA	NA	NA	NA	92477397	92488942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92484037_92484101_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816
ENSMUSG00000032374.15_92478436_92489231_1	chr9	+	1051	10	ISM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	54119	1242	54119	-1242	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTGTTAAAAATGGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	92478435	92489231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92478494_92480640_92480767_92482793_92482936_92484037_92484101_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
ENSMUSG00000032374.15_92482882_92489491_1	chr9	+	1039	8	ISM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	58565	982	58565	-982	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAAAAAAAGTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	92482881	92489491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92482936_92484037_92484101_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
ENSMUSG00000032374.15_92485085_92489712_1	chr9	+	1059	6	ISM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	60768	761	60768	-761	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACGCCTACTGGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	92485084	92489712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
ENSMUSG00000032374.15_92488635_92490013_1	chr9	+	1085	3	ISM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	64318	460	64318	-460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCCTTCTAGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	92488634	92490013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92488708_92488816_92488943_92489127
ENSMUSG00000032374.15_92488882_92490119_1	chr9	+	1053	2	ISM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	64565	354	64565	-354	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTACTTGAATTTTATATC	NA	NA	NA	NA	NA	NA	NA	NA	92488881	92490119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92488943_92489127
ENSMUSG00000032376.13_66423516_66427984_1	chr9	-	2621	4	ISM	ENSMUSG00000032376.13	ENSMUST00000098613.9	2797	14	72334	-993	46203	993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCTGGTTGAGTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	66427984	66423515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890
ENSMUSG00000032376.13_66423742_66434471_1	chr9	-	2576	6	ISM	ENSMUSG00000032376.13	ENSMUST00000098613.9	2797	14	65847	-767	39716	767	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCATGCAACTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	66434471	66423741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396
ENSMUSG00000032376.13_66423855_66437684_1	chr9	-	2654	7	ISM	ENSMUSG00000032376.13	ENSMUST00000098613.9	2797	14	62634	-654	36503	654	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATCTGAACACCCATGAT	NA	NA	NA	NA	NA	NA	NA	NA	66437684	66423854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525
ENSMUSG00000032376.13_66424221_66451298_1	chr9	-	2575	10	ISM	ENSMUSG00000032376.13	ENSMUST00000174387.2	1901	14	48990	-1136	22889	288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCTCTAATATATCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	66451298	66424220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227
ENSMUSG00000032376.13_66424733_66500240_1	chr9	-	2609	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	184	2814	48	-224	multi-exon	FALSE	canonical	NA	NA	NA	NA	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGAGTGTACAACTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	66500240	66424732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
ENSMUSG00000032376.13_66425357_66474208_1	chr9	-	1833	14	ISM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	26216	3438	-21	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTGCTGTCTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	66474208	66425356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124
ENSMUSG00000032377.9_92339447_92364826_1	chr9	+	803	4	ISM	ENSMUSG00000032377.9	ENSMUST00000034941.9	3204	9	21	9683	21	-9683	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGTGACGAATCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	92339446	92364826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92339979_92353773_92353802_92354954_92355066_92364694
ENSMUSG00000032377.9_92339715_92366849_1	chr9	+	747	6	ISM	ENSMUSG00000032377.9	ENSMUST00000034941.9	3204	9	289	7660	289	-7660	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAGATGACTTTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	92339714	92366849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92339979_92353773_92353802_92354954_92355066_92364694_92364919_92365873_92365917_92366772
ENSMUSG00000032377.9_92339784_92366933_1	chr9	+	762	6	ISM	ENSMUSG00000032377.9	ENSMUST00000034941.9	3204	9	358	7576	358	-7576	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACCATGCAGAGGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	92339783	92366933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92339979_92353773_92353802_92354954_92355066_92364694_92364919_92365873_92365917_92366772
ENSMUSG00000032377.9_92339918_92370712_1	chr9	+	760	7	ISM	ENSMUSG00000032377.9	ENSMUST00000034941.9	3204	9	492	3797	492	-3797	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTATAGCATCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	92339917	92370712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92339979_92353773_92353802_92354954_92355066_92364694_92364919_92365873_92365917_92366772_92367000_92370646
ENSMUSG00000032377.9_92364794_92372899_1	chr9	+	803	6	ISM	ENSMUSG00000032377.9	ENSMUST00000034941.9	3204	9	25368	1610	25368	-1610	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATTCAGCTTATGTATA	NA	NA	NA	NA	NA	NA	NA	NA	92364793	92372899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92364919_92365873_92365917_92366772_92367000_92370646_92370809_92372004_92372164_92372812
ENSMUSG00000032377.9_92366830_92373064_1	chr9	+	743	4	ISM	ENSMUSG00000032377.9	ENSMUST00000034941.9	3204	9	27404	1445	27404	-1445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAGCTATGGGAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	92366829	92373064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92367000_92370646_92370809_92372004_92372164_92372812
ENSMUSG00000032377.9_92366908_92373145_1	chr9	+	746	4	ISM	ENSMUSG00000032377.9	ENSMUST00000034941.9	3204	9	27482	1364	27482	-1364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTAGGAAAAACTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	92366907	92373145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92367000_92370646_92370809_92372004_92372164_92372812
ENSMUSG00000032377.9_92366959_92373196_1	chr9	+	746	4	ISM	ENSMUSG00000032377.9	ENSMUST00000034941.9	3204	9	27533	1313	27533	-1313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTTAGGAGCCAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	92366958	92373196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92367000_92370646_92370809_92372004_92372164_92372812
ENSMUSG00000032377.9_92372011_92373401_1	chr9	+	742	2	ISM	ENSMUSG00000032377.9	ENSMUST00000034941.9	3204	9	32585	1108	32585	-1108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATACCCTCAACTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	92372010	92373401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92372164_92372812
ENSMUSG00000032377.9_92372073_92373494_1	chr9	+	773	2	ISM	ENSMUSG00000032377.9	ENSMUST00000034941.9	3204	9	32647	1015	32647	-1015	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGGCATCTTACACAT	NA	NA	NA	NA	NA	NA	NA	NA	92372072	92373494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_92372164_92372812
ENSMUSG00000032380.10_66072659_66139043_1	chr9	+	330	3	ISM	ENSMUSG00000032380.10	ENSMUST00000238682.2	1594	10	7151	25561	7151	-25561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGGAGGAAGCCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	66072658	66139043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_66072718_66127815_66128038_66138994
ENSMUSG00000032380.10_66128029_66153828_1	chr9	+	278	3	ISM	ENSMUSG00000032380.10	ENSMUST00000238682.2	1594	10	62521	10776	62521	-10776	internal_fragment	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTGGGATTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66128028	66153828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_66128038_66138994_66139134_66153698
ENSMUSG00000032380.10_66139082_66161787_1	chr9	+	293	5	ISM	ENSMUSG00000032380.10	ENSMUST00000238682.2	1594	10	73574	2817	73574	-2817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGAAACCCTGGCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	66139081	66161787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_66139134_66153698_66153829_66157618_66157668_66158356_66158384_66161752
ENSMUSG00000032381.6_66033893_66043629_1	chr9	+	621	4	ISM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	0	2608	0	-2608	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGAAGATGGCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	66033892	66043629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_66034253_66039808_66039974_66040713_66040764_66043583
ENSMUSG00000032381.6_66034035_66045743_1	chr9	+	604	5	FSM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	142	494	142	-494	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTGGATCTGCTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	66034034	66045743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_66034253_66039808_66039974_66040713_66040764_66043583_66043630_66045618
ENSMUSG00000032381.6_66034188_66045967_1	chr9	+	675	5	FSM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	295	270	295	-270	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTGCCTGGCCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	66034187	66045967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_66034253_66039808_66039974_66040713_66040764_66043583_66043630_66045618
ENSMUSG00000032381.6_66039875_66046073_1	chr9	+	650	4	ISM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	5982	164	5982	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTCAAGTGATCAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	66039874	66046073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_66039974_66040713_66040764_66043583_66043630_66045618
ENSMUSG00000032381.6_66043582_66046237_1	chr9	+	667	2	ISM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	9689	0	9689	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTCACCTTAGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66043581	66046237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_66043630_66045618
ENSMUSG00000032382.15_65995415_65998012_1	chr9	-	734	4	ISM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	34156	0	34035	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACTGGGCATGGTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	65998012	65995414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868
ENSMUSG00000032382.15_65995667_66000646_1	chr9	-	688	5	ISM	ENSMUSG00000032382.15	ENST00000561026.5	1372	13	31401	-136	31401	136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGTTACTCTAACCAAC	NA	NA	NA	NA	NA	NA	NA	NA	66000646	65995666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440
ENSMUSG00000032382.15_65995667_66001734_1	chr9	-	782	6	ISM	ENSMUSG00000032382.15	ENST00000561026.5	1372	13	30313	-136	30313	136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGTTACTCTAACCAAC	NA	NA	NA	NA	NA	NA	NA	NA	66001734	65995666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640
ENSMUSG00000032382.15_65995803_66032079_1	chr9	-	1404	13	FSM	ENSMUSG00000032382.15	ENST00000561026.5	1372	13	-32	0	-32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGACCAAGGACACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	66032079	65995802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66016798_66016911_66031888
ENSMUSG00000032382.15_65996810_66003915_1	chr9	-	715	6	ISM	ENSMUSG00000032382.15	ENST00000561026.5	1372	13	28132	1007	28132	-1007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCTAGAAACCATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	66003915	65996809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839
ENSMUSG00000032382.15_65997960_66005679_1	chr9	-	689	7	ISM	ENSMUSG00000032382.15	ENST00000561026.5	1372	13	26368	2157	26368	-2157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTGCAGAAGAAGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	66005679	65997959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612
ENSMUSG00000032382.15_66000614_66012830_1	chr9	-	674	9	ISM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	19338	5199	19217	-4811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAGCCATGCTTGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	66012830	66000613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802
ENSMUSG00000032382.15_66001904_66016910_1	chr9	-	759	8	ISM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	15258	6489	15137	-6101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAGCCCTGAGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	66016910	66001903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798
ENSMUSG00000032382.15_66002001_66031920_1	chr9	-	694	9	ISM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	248	6586	127	-6198	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCAGGCTTTGAGTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	66031920	66002000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
ENSMUSG00000032383.8_65967613_65968811_1	chr9	+	133	2	ISM	ENSMUSG00000032383.8	ENST00000681397.1	863	5	73	5092	73	-5092	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGTTCCAAAAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	65967612	65968811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65967683_65968748
ENSMUSG00000032383.8_65967667_65968862_1	chr9	+	130	2	ISM	ENSMUSG00000032383.8	ENST00000681397.1	863	5	127	5041	127	-5041	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGGCTAACCCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	65967666	65968862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65967683_65968748
ENSMUSG00000032383.8_65968850_65973598_1	chr9	+	314	4	ISM	ENSMUSG00000032383.8	ENSMUST00000034947.7	892	5	1337	307	1310	-305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCAAGACAGACAGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	65968849	65973598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65968863_65970270_65970365_65972768_65972954_65973576
ENSMUSG00000032383.8_65970275_65972831_1	chr9	+	153	2	ISM	ENSMUSG00000032383.8	ENST00000681397.1	863	5	2735	1072	2735	-1072	internal_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGTGAGCATGGCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	65970274	65972831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65970365_65972768
ENSMUSG00000032383.8_65970275_65973668_1	chr9	+	367	3	ISM	ENSMUSG00000032383.8	ENST00000681397.1	863	5	2735	235	2735	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1624	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAAACCCTTCGCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	65970274	65973668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65970365_65972768_65972954_65973576
ENSMUSG00000032383.8_65972925_65973668_1	chr9	+	121	2	ISM	ENSMUSG00000032383.8	ENST00000681397.1	863	5	5385	235	5385	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAAACCCTTCGCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	65972924	65973668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65972954_65973576
ENSMUSG00000032383.8_65972925_65973905_1	chr9	+	358	2	ISM	ENSMUSG00000032383.8	ENST00000681397.1	863	5	5385	-2	5385	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1930	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGGTGTGGGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	65972924	65973905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65972954_65973576
ENSMUSG00000032384.17_65816312_65949189_1	chr9	+	3896	12	FSM	ENSMUSG00000032384.17	ENSMUST00000205379.2	4001	12	106	-1	44	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGGAAATGGTGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	65816311	65949189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_65816451_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65939520_65939628_65946858
ENSMUSG00000032386.16_65740663_65782327_1	chr9	-	1326	10	FSM	ENSMUSG00000032386.16	ENST00000381279.3	1326	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAGGAAAAAAGGAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	65782327	65740662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773878_65780380_65780460_65782123
ENSMUSG00000032387.16_65537990_65567099_1	chr9	+	1129	8	FSM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	149	709	149	-709	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGTCCAGCCTACTGC	NA	NA	NA	NA	NA	NA	NA	NA	65537989	65567099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ENSMUSG00000032387.16_65538092_65567174_1	chr9	+	1102	8	FSM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	251	634	251	-634	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTGGGGGTCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	65538091	65567174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ENSMUSG00000032387.16_65538135_65567234_1	chr9	+	1119	8	FSM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	294	574	294	-574	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACAGACTCTGTTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	65538134	65567234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ENSMUSG00000032387.16_65556629_65567365_1	chr9	+	1207	7	ISM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	18788	443	18788	-443	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCCACCCTGCCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	65556628	65567365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ENSMUSG00000032387.16_65558291_65567530_1	chr9	+	1114	4	ISM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	20450	278	20450	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAATGTTTAGTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	65558290	65567530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65558366_65558828_65558987_65566416_65566487_65566719
ENSMUSG00000032387.16_65558867_65567655_1	chr9	+	1126	3	ISM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	21026	153	21026	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGAGCATGTCTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	65558866	65567655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65558987_65566416_65566487_65566719
ENSMUSG00000032387.16_65558924_65567708_1	chr9	+	1122	3	ISM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	21083	100	21083	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGACAATGATGTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	65558923	65567708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65558987_65566416_65566487_65566719
ENSMUSG00000032388.8_65368235_65376121_1	chr9	+	354	3	ISM	ENSMUSG00000032388.8	ENSMUST00000213957.2	1302	8	0	16009	0	-16009	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTCTCATCTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	65368234	65376121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65368437_65372545_65372633_65376056
ENSMUSG00000032388.8_65368391_65380967_1	chr9	+	343	4	ISM	ENSMUSG00000032388.8	ENSMUST00000213957.2	1302	8	156	11163	156	-11163	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTTTTAGACCACTT	NA	NA	NA	NA	NA	NA	NA	NA	65368390	65380967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919
ENSMUSG00000032388.8_65372600_65383220_1	chr9	+	375	4	ISM	ENSMUSG00000032388.8	ENSMUST00000213957.2	1302	8	4365	8910	-3455	-8910	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCAGTGACACGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	65372599	65383220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65372633_65376056_65376219_65380919_65381001_65383121
ENSMUSG00000032388.8_65376071_65391864_1	chr9	+	650	5	NNC	ENSMUSG00000032388.8	novel	1042	6	NA	NA	16	-266	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	548	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCCAGCGTGGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	65376070	65391864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_65376219_65383123_65383268_65387660_65387770_65389142_65389251_65391723
ENSMUSG00000032388.8_65376071_65394182_1	chr9	+	720	6	FSM	ENSMUSG00000032388.8	ENST00000416889.6	1042	6	16	306	16	-306	multi-exon	TRUE	canonical	NA	NA	NA	NA	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGAGGTGCAGAAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	65376070	65394182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_65376219_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
ENSMUSG00000032388.8_65380938_65389165_1	chr9	+	341	4	ISM	ENSMUSG00000032388.8	ENSMUST00000213957.2	1302	8	12703	2965	4883	-2965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCTTCAAGGCTAACTC	NA	NA	NA	NA	NA	NA	NA	NA	65380937	65389165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65381001_65383121_65383268_65387660_65387770_65389142
ENSMUSG00000032388.8_65383122_65394360_1	chr9	+	750	5	ISM	ENSMUSG00000032388.8	ENST00000416889.6	1042	6	7067	128	7067	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGTGTGACTGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	65383121	65394360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
ENSMUSG00000032388.8_65387659_65394360_1	chr9	+	606	4	ISM	ENSMUSG00000032388.8	ENST00000416889.6	1042	6	11604	128	11604	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGTGTGACTGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	65387658	65394360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65387770_65389142_65389251_65391723_65391865_65394114
ENSMUSG00000032388.8_65387659_65394489_1	chr9	+	735	4	ISM	ENSMUSG00000032388.8	ENST00000416889.6	1042	6	11604	-1	11604	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAAAGCTTGGGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	65387658	65394489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65387770_65389142_65389251_65391723_65391865_65394114
ENSMUSG00000032393.16_64939838_64952966_1	chr9	+	693	5	ISM	ENSMUSG00000032393.16	ENST00000300141.11	4671	20	95	37014	95	-35306	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCCTGCTGATCCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	64939837	64952966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64939906_64944250_64944524_64949545_64949659_64950967_64951142_64952901
ENSMUSG00000032393.16_64944293_64958717_1	chr9	+	733	5	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	4289	29555	4289	-29555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTTCTTCAAGAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	64944292	64958717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671
ENSMUSG00000032393.16_64944474_64960371_1	chr9	+	662	6	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	4470	27901	4470	-27901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATCTGAGGTGGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	64944473	64960371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326
ENSMUSG00000032393.16_64949632_64961084_1	chr9	+	644	6	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	9628	27188	9628	-27188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGATTGTTGTTGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	64949631	64961084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050
ENSMUSG00000032393.16_64951092_64962157_1	chr9	+	670	7	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	11088	26115	11088	-26115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATCTCCCCTGAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	64951091	64962157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109
ENSMUSG00000032393.16_64953022_64963112_1	chr9	+	669	7	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	13018	25160	13018	-25160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAATTGAGTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	64953021	64963112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073
ENSMUSG00000032393.16_64960348_64967552_1	chr9	+	677	6	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	20344	20720	20344	-20720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGATCTAATGTATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	64960347	64967552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484
ENSMUSG00000032393.16_64961065_64970787_1	chr9	+	646	6	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	21061	17485	21061	-17485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTATGCAAACCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	64961064	64970787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708
ENSMUSG00000032393.16_64961752_64971132_1	chr9	+	653	6	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	21748	17140	21748	-17140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAGAATCCACACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	64961751	64971132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100
ENSMUSG00000032393.16_64962164_64973714_1	chr9	+	735	6	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	22160	14558	22160	-14558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGACCTACAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	64962163	64973714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632
ENSMUSG00000032393.16_64963084_64981753_1	chr9	+	698	6	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	23080	6519	23080	-6519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATTTCCGCCTGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	64963083	64981753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720
ENSMUSG00000032393.16_64963155_64981810_1	chr9	+	684	6	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	23151	6462	23151	-6462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGGGGATCCTGTCACCG	NA	NA	NA	NA	NA	NA	NA	NA	64963154	64981810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720
ENSMUSG00000032393.16_64963209_64981867_1	chr9	+	687	6	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	23205	6405	23205	-6405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGTGAACATAGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	64963208	64981867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720
ENSMUSG00000032393.16_64967489_64983041_1	chr9	+	682	6	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	27485	5231	27485	-5231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAGGACTCCAGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	64967488	64983041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017
ENSMUSG00000032393.16_64970709_64983170_1	chr9	+	735	5	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	30705	5102	30705	-5102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTAGCTATTATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	64970708	64983170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017
ENSMUSG00000032393.16_64970823_64985284_1	chr9	+	661	6	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	30819	2988	30819	-2988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATACAGGATACACGGAG	NA	NA	NA	NA	NA	NA	NA	NA	64970822	64985284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244
ENSMUSG00000032393.16_64971198_64985991_1	chr9	+	664	6	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	31194	2281	31194	-2281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAATGTTCACTTTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	64971197	64985991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955
ENSMUSG00000032393.16_64973726_64988144_1	chr9	+	740	6	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	33722	128	33722	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGAACTTGGTGTACAC	NA	NA	NA	NA	NA	NA	NA	NA	64973725	64988144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ENSMUSG00000032393.16_64973762_64988144_1	chr9	+	704	6	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	33758	128	33758	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGAACTTGGTGTACAC	NA	NA	NA	NA	NA	NA	NA	NA	64973761	64988144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ENSMUSG00000032393.16_64983030_64988272_1	chr9	+	656	4	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	43026	0	43026	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATCTGCAGTTCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	64983029	64988272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64983171_64985244_64985388_64985955_64986068_64988012
ENSMUSG00000032393.16_64985282_64988456_1	chr9	+	662	3	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	45278	-184	45278	184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTACAGTATACTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	64985281	64988456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64985388_64985955_64986068_64988012
ENSMUSG00000032393.16_64985343_64988537_1	chr9	+	682	3	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	45339	-265	45339	265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGATTTGATAGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	64985342	64988537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64985388_64985955_64986068_64988012
ENSMUSG00000032393.16_64986041_64988665_1	chr9	+	680	2	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	46037	-393	46037	393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCTAGTGGCCTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	64986040	64988665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64986068_64988012
ENSMUSG00000032396.18_64214039_64219201_1	chr9	-	1721	6	ISM	ENSMUSG00000032396.18	ENSMUST00000113890.2	3224	17	28538	-254	28538	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGGCTCAAATTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	64219201	64214038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727
ENSMUSG00000032397.8_64188885_64211839_1	chr9	+	980	8	FSM	ENSMUSG00000032397.8	ENSMUST00000034964.7	1211	8	-4	235	0	-235	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTTAAGACTTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	64188884	64211839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_64188935_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUSG00000032397.8_64195394_64212706_3	chr9	+	1787	7	NNC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	6505	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAAAGTTGAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	64195393	64212706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208329_64208531_64211588
ENSMUSG00000032397.8_64195455_64212716_2	chr9	+	1736	7	NNC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	6566	10	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGGCTGGGCGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	64195454	64212716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_64195526_64196997_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUSG00000032399.9_64080657_64084759_1	chr9	+	889	7	ISM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	0	1189	0	-1189	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTTTCCCTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	64080656	64084759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602
ENSMUSG00000032399.9_64082197_64085255_1	chr9	+	900	8	ISM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	1540	693	1540	-693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGACTATGCGCAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	64082196	64085255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178
ENSMUSG00000032399.9_64082474_64085552_1	chr9	+	913	8	ISM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	1817	396	1817	-396	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAATCCGAGAAGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	64082473	64085552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ENSMUSG00000032399.9_64083374_64085720_1	chr9	+	833	6	ISM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	2717	228	2717	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8719	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATAAACTATTAAAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	64083373	64085720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ENSMUSG00000032399.9_64083405_64085790_1	chr9	+	872	6	ISM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	2748	158	2748	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGACAAACCCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	64083404	64085790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ENSMUSG00000032399.9_64083457_64085839_1	chr9	+	869	6	ISM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	2800	109	2800	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10506	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGAAATTAACCTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	64083456	64085839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ENSMUSG00000032399.9_64084221_64085949_1	chr9	+	939	5	ISM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	3564	-1	3564	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCTTTGTTCCACATGG	NA	NA	NA	NA	NA	NA	NA	NA	64084220	64085949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ENSMUSG00000032400.19_64044426_64047265_1	chr9	-	1009	2	ISM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	33121	0	32896	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGCCTGGTTTAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	64047265	64044425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64045342_64047172
ENSMUSG00000032400.19_64044844_64054658_1	chr9	-	940	5	ISM	ENSMUSG00000032400.19	ENSMUST00000176299.8	1831	18	25503	-431	25503	-418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGGGGATGCCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	64054658	64044843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551
ENSMUSG00000032400.19_64044994_64057550_1	chr9	-	962	7	ISM	ENSMUSG00000032400.19	ENSMUST00000176299.8	1831	18	22611	-281	22611	281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTAAAAGTGAACCAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	64057550	64044993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437
ENSMUSG00000032400.19_64057455_64070014_1	chr9	-	938	9	ISM	ENSMUSG00000032400.19	ENSMUST00000176299.8	1831	18	10147	12180	10147	-10269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGCTTTTTTGTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	64070014	64057454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845
ENSMUSG00000032400.19_64068103_64080386_1	chr9	-	981	7	ISM	ENSMUSG00000032400.19	ENSMUST00000176794.8	1746	17	-210	20917	0	-20917	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGAATGGACCCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	64080386	64068102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ENSMUSG00000032405.11_62826657_62887542_1	chr9	-	1195	6	ISM	ENSMUSG00000032405.11	ENST00000545237.1	2938	14	361	37637	361	-36495	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGACTGCAGAAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	62887542	62826656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859572_62887216
ENSMUSG00000032409.16_95743438_95753708_1	chr9	+	2042	8	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	3665	80007	3665	-79989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCAAAAATACACCTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	95743437	95753708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95751934_95752126_95752672_95752826_95753056_95753250_95753486
ENSMUSG00000032409.16_95744885_95756197_1	chr9	+	2016	8	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	5112	77518	5112	-77500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTCTTGGGACTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	95744884	95756197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95744986_95747020_95747899_95748635_95748815_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130
ENSMUSG00000032409.16_95744935_95756269_1	chr9	+	2038	8	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	5162	77446	5162	-77428	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAAGTATATATTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	95744934	95756269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95744986_95747020_95747899_95748635_95748815_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130
ENSMUSG00000032409.16_95747077_95756465_1	chr9	+	2045	8	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	7304	77250	7304	-77232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGATACTTTGATTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	95747076	95756465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95747899_95748635_95748815_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403
ENSMUSG00000032409.16_95747197_95756824_1	chr9	+	2033	9	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	7424	76891	7424	-76873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTCTCTGGAGCGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	95747196	95756824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95747899_95748635_95748815_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755
ENSMUSG00000032409.16_95747259_95756885_1	chr9	+	2032	9	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	7486	76830	7486	-76812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGAATTTTTTCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	95747258	95756885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95747899_95748635_95748815_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755
ENSMUSG00000032409.16_95747363_95757712_1	chr9	+	2036	10	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	7590	76003	7590	-75985	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGATTCGAAAACAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	95747362	95757712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95747899_95748635_95748815_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646
ENSMUSG00000032409.16_95747426_95757782_1	chr9	+	2043	10	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	7653	75933	7653	-75915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGACTTTCCTGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	95747425	95757782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95747899_95748635_95748815_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646
ENSMUSG00000032409.16_95747543_95760579_1	chr9	+	2033	11	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	7770	73136	7770	-73118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGGAAACAATTAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	95747542	95760579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95747899_95748635_95748815_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507
ENSMUSG00000032409.16_95747582_95760643_1	chr9	+	2058	11	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	7809	73072	7809	-73054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGGTTTGTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	95747581	95760643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95747899_95748635_95748815_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507
ENSMUSG00000032409.16_95747714_95763323_1	chr9	+	2030	12	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	7941	70392	7941	-70374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGATTGCATAACGAATT	NA	NA	NA	NA	NA	NA	NA	NA	95747713	95763323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95747899_95748635_95748815_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278
ENSMUSG00000032409.16_95747766_95763392_1	chr9	+	2047	12	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	7993	70323	7993	-70305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTGCCTCATTTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	95747765	95763392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95747899_95748635_95748815_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278
ENSMUSG00000032409.16_95748736_95767442_1	chr9	+	2027	13	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	8963	66273	8963	-66255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGTTCTGTGAGAGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	95748735	95767442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95748815_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394
ENSMUSG00000032409.16_95751948_95770168_1	chr9	+	2034	13	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	12175	63547	12175	-63529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGCTGTCTGGATCACGC	NA	NA	NA	NA	NA	NA	NA	NA	95751947	95770168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152
ENSMUSG00000032409.16_95752009_95770213_1	chr9	+	2018	13	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	12236	63502	12236	-63484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATAGTGGCTTTGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	95752008	95770213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152
ENSMUSG00000032409.16_95752783_95775531_1	chr9	+	2032	14	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	13010	58184	13010	-58166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTAGATGTTCGAATT	NA	NA	NA	NA	NA	NA	NA	NA	95752782	95775531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467
ENSMUSG00000032409.16_95753158_95779666_1	chr9	+	2028	14	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	13385	54049	13385	-54031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGCCAAGATGCAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	95753157	95779666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588
ENSMUSG00000032409.16_95753677_95785781_1	chr9	+	2055	15	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	13904	47934	13904	-47916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCCCTGAGCATGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	95753676	95785781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715
ENSMUSG00000032409.16_95756222_95787875_1	chr9	+	2035	15	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	16449	45840	16449	-45822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCATCATCTTGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	95756221	95787875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790
ENSMUSG00000032409.16_95756796_95790359_1	chr9	+	2025	15	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	17023	43356	17023	-43338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGACAGTGCATCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	95756795	95790359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302
ENSMUSG00000032409.16_95756847_95790418_1	chr9	+	2033	15	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	17074	43297	17074	-43279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTCACCCAATGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	95756846	95790418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302
ENSMUSG00000032409.16_95757691_95792565_1	chr9	+	2037	15	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	17918	41150	17918	-41132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCGTTTTCTAGACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	95757690	95792565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790514_95792531
ENSMUSG00000032409.16_95760643_95797118_1	chr9	+	2049	15	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	20870	36597	20870	-36579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATGACAGGGCTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	95760642	95797118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790514_95792531_95792711_95796989
ENSMUSG00000032409.16_95763408_95798574_1	chr9	+	1988	15	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	23635	35141	23635	-35123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATGTTTTATTACAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	95763407	95798574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790514_95792531_95792711_95796989_95797155_95798482
ENSMUSG00000032409.16_95765195_95802767_1	chr9	+	2045	16	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	25422	30948	25422	-30930	internal_fragment	TRUE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCTAAAAAGAGAGACACC	NA	NA	NA	NA	NA	NA	NA	NA	95765194	95802767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790514_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719
ENSMUSG00000032409.16_95770151_95803754_1	chr9	+	2028	15	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	30378	29961	30378	-29943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTCCAGGTGACAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	95770150	95803754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790514_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705
ENSMUSG00000032409.16_95770201_95803813_1	chr9	+	2037	15	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	30428	29902	30428	-29884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCAGAATTCCTATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	95770200	95803813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790514_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705
ENSMUSG00000032409.16_95779638_95809358_1	chr9	+	2041	14	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	39865	24357	39865	-24339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGGCTAACTTTGAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	95779637	95809358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790514_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221
ENSMUSG00000032409.16_95781089_95814486_1	chr9	+	2031	14	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	41316	19229	41316	-19211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGATCTCATCCGATATA	NA	NA	NA	NA	NA	NA	NA	NA	95781088	95814486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790514_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382
ENSMUSG00000032409.16_95785717_95818426_1	chr9	+	2131	15	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	45944	15289	45944	-15271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACCATATCAGTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	95785716	95818426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95785832_95787790_95787912_95789348_95789487_95790302_95790514_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347
ENSMUSG00000032409.16_95789414_95819639_1	chr9	+	2057	14	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	49641	14076	49641	-14058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTTGTTGGAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	95789413	95819639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95789487_95790302_95790514_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566
ENSMUSG00000032409.16_95790421_95821306_1	chr9	+	2032	14	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	50648	12409	50648	-12391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGATCCCTACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	95790420	95821306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95790514_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202
ENSMUSG00000032409.16_95792599_95823047_1	chr9	+	2094	14	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	52826	10668	52826	-10650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTCTTTGATTAACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	95792598	95823047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922
ENSMUSG00000032409.16_95797027_95824789_1	chr9	+	2115	14	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	57254	8926	57254	-8908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTATATTTATTCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	95797026	95824789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638
ENSMUSG00000032409.16_95802717_95827441_1	chr9	+	2008	13	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	62944	6274	62944	-6256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTTGGCTACATCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	95802716	95827441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396
ENSMUSG00000032409.16_95803812_95832641_1	chr9	+	2026	14	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	64039	1074	64039	-1056	internal_fragment	TRUE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAGTGAAAGGACACTCC	NA	NA	NA	NA	NA	NA	NA	NA	95803811	95832641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597
ENSMUSG00000032409.16_95804866_95833595_1	chr9	+	2041	14	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	65093	120	65093	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGCATTACCTCATAC	NA	NA	NA	NA	NA	NA	NA	NA	95804865	95833595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ENSMUSG00000032411.16_96078433_96199956_1	chr9	+	1602	14	FSM	ENSMUSG00000032411.16	ENSMUST00000188750.7	1713	14	43	68	32	-68	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCCCTGTTCATTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	96078432	96199956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ENSMUSG00000032412.9_96215112_96227947_1	chr9	-	760	2	NNC	ENSMUSG00000032412.9	novel	765	2	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATCTGAAAGTAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	96227947	96215111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_96215748_96227823
ENSMUSG00000032412.9_96215112_96227947_2	chr9	-	766	2	FSM	ENSMUSG00000032412.9	ENST00000462082.1	765	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATCTGAAAGTAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	96227947	96215111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_96215748_96227817
ENSMUSG00000032412.9_96215449_96217452_1	chr9	-	320	2	ISM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	29043	741	10495	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCTTCCAGATCATAGT	NA	NA	NA	NA	NA	NA	NA	NA	96217452	96215448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_96215748_96217431
ENSMUSG00000032412.9_96215575_96222279_1	chr9	-	333	4	ISM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	24216	867	5668	-462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGATGTCTCCACAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	96222279	96215574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254
ENSMUSG00000032412.9_96215623_96222333_1	chr9	-	339	4	ISM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	24162	915	5614	-510	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTCTTGGGACGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	96222333	96215622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254
ENSMUSG00000032412.9_96215679_96222380_1	chr9	-	330	4	ISM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	24115	971	5567	-566	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGAGTGCCATATTGC	NA	NA	NA	NA	NA	NA	NA	NA	96222380	96215678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254
ENSMUSG00000032412.9_96220721_96225428_1	chr9	-	335	3	ISM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	21067	6013	2519	-5608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCAAAGGTTAGTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	96225428	96220720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_96220763_96222254_96222440_96225320
ENSMUSG00000032412.9_96222318_96227901_1	chr9	-	314	3	ISM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	18594	7610	46	-7205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTGATGCTAATTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	96227901	96222317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_96222440_96225320_96225429_96227817
ENSMUSG00000032412.9_96222379_96246143_1	chr9	-	343	4	ISM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	352	7671	352	-7266	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGTCCTGACTATAGGG	NA	NA	NA	NA	NA	NA	NA	NA	96246143	96222378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_96222440_96225320_96225429_96227817_96227947_96246098
ENSMUSG00000032412.9_96225352_96246221_1	chr9	-	329	3	ISM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	274	10644	274	-10239	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGAAGACCTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	96246221	96225351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_96225429_96227817_96227947_96246098
ENSMUSG00000032412.9_96225405_96246271_1	chr9	-	326	3	ISM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	224	10697	224	-10292	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTGCCTTGGAATATACA	NA	NA	NA	NA	NA	NA	NA	NA	96246271	96225404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_96225429_96227817_96227947_96246098
ENSMUSG00000032413.13_96421353_96464872_1	chr9	-	5158	19	ISM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	48798	0	48798	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGTGAGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	96464872	96421352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795
ENSMUSG00000032413.13_96421528_96474071_1	chr9	-	5059	20	ISM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	39599	175	39599	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTACGGTGTCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	96474071	96421527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002
ENSMUSG00000032413.13_96421793_96493492_1	chr9	-	5059	23	ISM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	20178	440	20178	-440	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCAAGGCCGAATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	96493492	96421792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434
ENSMUSG00000032413.13_96421839_96493552_1	chr9	-	5073	23	ISM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	20118	486	20118	-486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACCAACAAGAAACATCAT	NA	NA	NA	NA	NA	NA	NA	NA	96493552	96421838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434
ENSMUSG00000032413.13_96422000_96513589_1	chr9	-	5085	24	FSM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	81	647	81	-647	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGACACTGGGCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	96513589	96421999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
ENSMUSG00000032413.13_96422057_96513608_1	chr9	-	5047	24	FSM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	62	704	62	-704	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCATCCATTGAGATTATA	NA	NA	NA	NA	NA	NA	NA	NA	96513608	96422056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
ENSMUSG00000032415.15_86189359_86330894_1	chr9	-	1413	8	FSM	ENSMUSG00000032415.15	ENST00000369747.8	1479	8	8	58	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTCTTTTGTTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	86330894	86189358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_86189930_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317449_86322638_86322808_86330815
ENSMUSG00000032415.15_86189359_86330894_2	chr9	-	1371	8	ISM	ENSMUSG00000032415.15	ENSMUST00000034986.14	1790	10	16109	0	8	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTCTTTTGTTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	86330894	86189358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86189930_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317407_86322638_86322808_86330815
ENSMUSG00000032415.15_86189476_86333928_1	chr9	-	1328	9	ISM	ENSMUSG00000032415.15	ENSMUST00000034986.14	1790	10	13075	117	-3026	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATCTTTAAAAACTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	86333928	86189475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86189930_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317407_86322638_86322808_86330815_86330907_86333866
ENSMUSG00000032415.15_86189522_86333989_1	chr9	-	1343	9	ISM	ENSMUSG00000032415.15	ENSMUST00000034986.14	1790	10	13014	163	-3087	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCTGGGAAATAAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	86333989	86189521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86189930_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317407_86322638_86322808_86330815_86330907_86333866
ENSMUSG00000032415.15_86189582_86334039_1	chr9	-	1333	9	ISM	ENSMUSG00000032415.15	ENSMUST00000034986.14	1790	10	12964	223	-3137	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCCTGTGTGAACGCA	NA	NA	NA	NA	NA	NA	NA	NA	86334039	86189581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86189930_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317407_86322638_86322808_86330815_86330907_86333866
ENSMUSG00000032415.15_86189795_86347003_1	chr9	-	1354	10	FSM	ENSMUSG00000032415.15	ENSMUST00000034986.14	1790	10	0	436	0	-436	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGAATGGGGACTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	86347003	86189794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_86189930_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317407_86322638_86322808_86330815_86330907_86333866_86334064_86346793
ENSMUSG00000032418.16_86463665_86469097_1	chr9	-	1378	2	ISM	ENSMUSG00000032418.16	ENSMUST00000185374.2	3292	14	100233	206	100233	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCGGGCAGCTCTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	86469097	86463664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86464961_86469015
ENSMUSG00000032418.16_86463822_86476630_1	chr9	-	1372	3	ISM	ENSMUSG00000032418.16	ENSMUST00000185374.2	3292	14	92700	363	92700	-363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACCAAGCCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	86476630	86463821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86464961_86469015_86469115_86476496
ENSMUSG00000032418.16_86463906_86478142_1	chr9	-	1362	4	ISM	ENSMUSG00000032418.16	ENSMUST00000185374.2	3292	14	91188	447	91188	-447	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGGCATGAGTAAATACA	NA	NA	NA	NA	NA	NA	NA	NA	86478142	86463905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108
ENSMUSG00000032418.16_86463954_86478195_1	chr9	-	1367	4	ISM	ENSMUSG00000032418.16	ENSMUST00000185374.2	3292	14	91135	495	91135	-495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACCTGCTCTAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	86478195	86463953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108
ENSMUSG00000032418.16_86464089_86480838_1	chr9	-	1355	5	ISM	ENSMUSG00000032418.16	ENSMUST00000185374.2	3292	14	88492	630	88492	-630	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTTGTTAGTGTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	86480838	86464088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771
ENSMUSG00000032418.16_86464173_86480865_1	chr9	-	1298	5	ISM	ENSMUSG00000032418.16	ENSMUST00000185374.2	3292	14	88465	714	88465	-714	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTAGAGCTCTCGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	86480865	86464172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771
ENSMUSG00000032418.16_86464393_86501853_1	chr9	-	1378	8	ISM	ENSMUSG00000032418.16	ENSMUST00000185374.2	3292	14	67477	934	67477	-934	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAACACAAACTTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	86501853	86464392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777
ENSMUSG00000032418.16_86464413_86528393_1	chr9	-	1422	9	ISM	ENSMUSG00000032418.16	ENSMUST00000185374.2	3292	14	40937	954	40937	-954	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCTCTTAAACAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86528393	86464412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363
ENSMUSG00000032418.16_86464501_86528435_1	chr9	-	1376	9	ISM	ENSMUSG00000032418.16	ENSMUST00000185374.2	3292	14	40895	1042	40895	-1042	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAATGGAAGACCCACACT	NA	NA	NA	NA	NA	NA	NA	NA	86528435	86464500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363
ENSMUSG00000032418.16_86464581_86528467_1	chr9	-	1328	9	ISM	ENSMUSG00000032418.16	ENSMUST00000185374.2	3292	14	40863	1122	40863	-1122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGATTATTCTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	86528467	86464580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363
ENSMUSG00000032418.16_86464739_86559967_1	chr9	-	1459	12	ISM	ENSMUSG00000032418.16	ENSMUST00000185374.2	3292	14	9363	1280	9363	-1280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTAAGGGTCAGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	86559967	86464738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916
ENSMUSG00000032418.16_86464884_86560018_1	chr9	-	1365	12	ISM	ENSMUSG00000032418.16	ENSMUST00000185374.2	3292	14	9312	1425	9312	-1425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGATGTACAGCACTAATT	NA	NA	NA	NA	NA	NA	NA	NA	86560018	86464883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916
ENSMUSG00000032418.16_86464937_86560066_1	chr9	-	1360	12	ISM	ENSMUSG00000032418.16	ENSMUST00000185374.2	3292	14	9264	1478	9264	-1478	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGGCCACTGTTTATCC	NA	NA	NA	NA	NA	NA	NA	NA	86560066	86464936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916
ENSMUSG00000032418.16_86469059_86561934_1	chr9	-	1356	12	ISM	ENSMUSG00000032418.16	ENSMUST00000185374.2	3292	14	7396	5600	7396	-5600	internal_fragment	TRUE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATACCATTCGAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	86561934	86469058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871
ENSMUSG00000032418.16_86476524_86577770_1	chr9	-	1389	12	ISM	ENSMUSG00000032418.16	ENST00000369705.4	2388	15	40	13102	40	-13065	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGGTCTTCCTCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	86577770	86476523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ENSMUSG00000032418.16_86476591_86577812_1	chr9	-	1364	12	ISM	ENSMUSG00000032418.16	ENST00000369705.4	2388	15	-2	13169	-2	-13132	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAATTCCTACGTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	86577812	86476590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ENSMUSG00000032418.16_86476649_86577872_1	chr9	-	1366	12	ISM	ENSMUSG00000032418.16	ENST00000369705.4	2388	15	-62	13227	-62	-13190	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCCTTTTGATCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	86577872	86476648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ENSMUSG00000032418.16_86478158_86578006_1	chr9	-	1429	11	ISM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	0	14734	0	-14699	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCAAAGCGGAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	86578006	86478157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ENSMUSG00000032422.19_88258817_88269340_1	chr9	-	1060	10	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	35732	-17	35732	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1604	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGGTATTACGGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	88269340	88258816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263
ENSMUSG00000032422.19_88258817_88276621_1	chr9	-	1205	11	ISM	ENSMUSG00000032422.19	ENST00000682682.1	2799	28	44242	-17	28451	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	863	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGGTATTACGGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	88276621	88258816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419
ENSMUSG00000032422.19_88258817_88285474_1	chr9	-	1821	16	ISM	ENSMUSG00000032422.19	ENST00000684717.1	2914	28	35389	-17	19598	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGGTATTACGGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	88285474	88258816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265923_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317
ENSMUSG00000032422.19_88262273_88276527_1	chr9	-	993	10	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	28545	3439	28545	-3439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	950	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCAGACTCCTGTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	88276527	88262272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419
ENSMUSG00000032422.19_88263863_88280371_1	chr9	-	939	9	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	24701	5029	24701	-5029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAATGTACACAGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	88280371	88263862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291
ENSMUSG00000032422.19_88264130_88284033_1	chr9	-	998	9	NNC	ENSMUSG00000032422.19	novel	2676	25	NA	NA	21039	-5296	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTTAATGGTCCACGT	NA	NA	NA	NA	NA	NA	NA	NA	88284033	88264129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283953
ENSMUSG00000032422.19_88264207_88285396_1	chr9	-	1104	11	ISM	ENSMUSG00000032422.19	ENST00000682738.1	2772	27	35467	5373	19676	-5373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGCGAAAGCAAAATCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	88285396	88264206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317
ENSMUSG00000032422.19_88264209_88284254_1	chr9	-	983	11	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	20818	5375	20818	-5375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1071	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAGCGAAAGCAAAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	88284254	88264208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196
ENSMUSG00000032422.19_88265812_88284321_1	chr9	-	996	9	NNC	ENSMUSG00000032422.19	novel	2676	25	NA	NA	20751	-6978	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCGTATGTTATGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	88284321	88265811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283953_88284032_88284196
ENSMUSG00000032422.19_88265886_88285409_1	chr9	-	1022	11	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	19663	7052	19663	-7052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGAATCTCCCAAACCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	88285409	88265885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317
ENSMUSG00000032422.19_88267772_88285474_1	chr9	-	993	8	NNC	ENSMUSG00000032422.19	novel	2676	25	NA	NA	19598	-8938	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCTTTTGAGAGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	88285474	88267771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283953_88284032_88284196_88284322_88285317
ENSMUSG00000032422.19_88267772_88285474_2	chr9	-	1003	8	NNC	ENSMUSG00000032422.19	novel	2676	25	NA	NA	19598	-8938	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCTTTTGAGAGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	88285474	88267771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283943_88284032_88284196_88284322_88285317
ENSMUSG00000032422.19_88267772_88286644_1	chr9	-	1169	10	ISM	ENSMUSG00000032422.19	ENST00000682738.1	2772	27	34219	8938	18428	-8938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCTTTTGAGAGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	88286644	88267771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563
ENSMUSG00000032422.19_88269264_88286471_1	chr9	-	1002	9	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	18601	10430	18601	-10430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGTGGCAGCCCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	88286471	88269263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356
ENSMUSG00000032422.19_88273848_88289427_1	chr9	-	1092	11	ISM	ENSMUSG00000032422.19	ENST00000682738.1	2772	27	31436	15014	15645	-15014	internal_fragment	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTCTTGAATCAAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	88289427	88273847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378
ENSMUSG00000032422.19_88276420_88287368_1	chr9	-	1019	10	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	17704	17586	17704	-17586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGTTCTGAGCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	88287368	88276419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292
ENSMUSG00000032422.19_88276420_88289535_1	chr9	-	1149	10	ISM	ENSMUSG00000032422.19	ENST00000682738.1	2772	27	31328	17586	15537	-17586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	705	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGTTCTGAGCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	88289535	88276419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378
ENSMUSG00000032422.19_88276555_88289452_1	chr9	-	958	11	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	15620	17721	15620	-17721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1045	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAAACCTTGCTGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	88289452	88276554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378
ENSMUSG00000032422.19_88276594_88289522_1	chr9	-	989	11	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	15550	17760	15550	-17760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1093	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTCTCCAGTAGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	88289522	88276593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378
ENSMUSG00000032422.19_88280368_88292643_1	chr9	-	931	11	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	12429	21534	12429	-21534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCGTATTCAAGAGTACGA	NA	NA	NA	NA	NA	NA	NA	NA	88292643	88280367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610
ENSMUSG00000032422.19_88283973_88305073_1	chr9	-	1022	10	ISM	ENSMUSG00000032422.19	ENST00000682939.1	2676	25	15790	25139	-1	-25139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCAGTTTACCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	88305073	88283972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88304950
ENSMUSG00000032422.19_88284270_88320758_1	chr9	-	926	10	ISM	ENSMUSG00000032422.19	ENST00000682939.1	2676	25	105	25436	105	-25436	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAAGCATATGAGCACG	NA	NA	NA	NA	NA	NA	NA	NA	88320758	88284269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88304950_88305072_88320720
ENSMUSG00000032422.19_88285318_88302382_1	chr9	-	794	8	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	2690	26484	2690	-26484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCAGAGCGGATAGTG	NA	NA	NA	NA	NA	NA	NA	NA	88302382	88285317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88302303
ENSMUSG00000032422.19_88286423_88304997_1	chr9	-	696	9	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	75	27589	75	-27589	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCTTTATGAACTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	88304997	88286422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88302303_88302383_88302801_88302879_88304950
ENSMUSG00000032422.19_88289485_88320798_1	chr9	-	623	8	ISM	ENSMUSG00000032422.19	ENST00000515216.6	2931	29	65	30651	65	-30651	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCATGTGGCCCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	88320798	88289484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ENSMUSG00000032422.19_88292634_88320799_1	chr9	-	418	5	ISM	ENSMUSG00000032422.19	ENST00000683643.1	2832	27	64	33800	64	-33800	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGTTAAAGCAAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	88320799	88292633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88292696_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ENSMUSG00000032423.13_88335991_88345215_1	chr9	-	1167	5	ISM	ENSMUSG00000032423.13	ENST00000677059.1	2166	12	18323	3	17591	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTAAGTAGATTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	88345215	88335990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88336349_88338453_88338783_88343722_88343845_88344288_88344439_88345007
ENSMUSG00000032423.13_88336095_88346762_1	chr9	-	1123	6	ISM	ENSMUSG00000032423.13	ENST00000677059.1	2166	12	16776	107	16044	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACTAAAGCTACTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	88346762	88336094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88336349_88338453_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700
ENSMUSG00000032423.13_88336220_88358875_1	chr9	-	1106	7	ISM	ENSMUSG00000032423.13	ENST00000677059.1	2166	12	4663	232	3931	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGGAGCATATTCTATTG	NA	NA	NA	NA	NA	NA	NA	NA	88358875	88336219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88336349_88338453_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841
ENSMUSG00000032423.13_88336276_88358921_1	chr9	-	1096	7	ISM	ENSMUSG00000032423.13	ENST00000677059.1	2166	12	4617	288	3885	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTGCAGTGGAGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	88358921	88336275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88336349_88338453_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841
ENSMUSG00000032423.13_88336317_88358982_1	chr9	-	1116	7	ISM	ENSMUSG00000032423.13	ENST00000677059.1	2166	12	4556	329	3824	-329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACAATGAAGACTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	88358982	88336316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88336349_88338453_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841
ENSMUSG00000032423.13_88338560_88345071_1	chr9	-	287	2	ISM	ENSMUSG00000032423.13	ENST00000678816.1	2323	9	19192	925	17735	-369	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCAAGGGGTGCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	88345071	88338559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88338783_88345007
ENSMUSG00000032423.13_88338601_88361662_1	chr9	-	1126	8	ISM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	2946	970	1144	-410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGATTTTCAAGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	88361662	88338600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623
ENSMUSG00000032423.13_88338616_88345123_1	chr9	-	283	2	ISM	ENSMUSG00000032423.13	ENST00000678816.1	2323	9	19140	981	17683	-425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCATACTATGGTTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	88345123	88338615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88338783_88345007
ENSMUSG00000032423.13_88338680_88345170_1	chr9	-	266	2	ISM	ENSMUSG00000032423.13	ENST00000678816.1	2323	9	19093	1045	17636	-489	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATACGAAGATTATTATGA	NA	NA	NA	NA	NA	NA	NA	NA	88345170	88338679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88338783_88345007
ENSMUSG00000032423.13_88338734_88361908_1	chr9	-	1124	9	ISM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	2700	1103	898	-543	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCGAGGGCGTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	88361908	88338733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846
ENSMUSG00000032423.13_88343739_88362681_1	chr9	-	1139	9	ISM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	1927	6108	125	-5548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCAAAGAATCAAATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	88362681	88343738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658
ENSMUSG00000032423.13_88343819_88362797_1	chr9	-	1175	9	ISM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	1811	6188	9	-5628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	921	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGAGGGAGAAAATATTG	NA	NA	NA	NA	NA	NA	NA	NA	88362797	88343818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658
ENSMUSG00000032423.13_88344402_88364184_1	chr9	-	1133	9	ISM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	424	6771	0	-6211	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAGAAGAAATTTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	88364184	88344401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ENSMUSG00000032423.13_88345004_88364301_1	chr9	-	1217	8	ISM	ENSMUSG00000032423.13	ENST00000678816.1	2323	9	-38	7369	0	-6813	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	961	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTACAATAATTATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	88364301	88345003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ENSMUSG00000032431.7_114204202_114219743_1	chr9	-	1668	7	NNC	ENSMUSG00000032431.7	novel	1674	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTCTCCGTCCTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	114219743	114204201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_114204645_114207107_114207192_114208977_114209124_114210653_114210783_114213763_114213936_114215269_114215420_114219199
ENSMUSG00000032434.10_114560241_114576175_1	chr9	+	1146	4	FSM	ENSMUSG00000032434.10	ENSMUST00000035007.10	3383	4	0	2237	0	-2237	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGTGGGCTGGTGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	114560240	114576175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_114560442_114566250_114566428_114569126_114569226_114575506
ENSMUSG00000032434.10_114566250_114576377_1	chr9	+	1148	3	ISM	ENSMUSG00000032434.10	ENSMUST00000035007.10	3383	4	6009	2035	6009	-2035	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTTTGCAACTCGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	114566249	114576377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114566428_114569126_114569226_114575506
ENSMUSG00000032434.10_114569171_114576526_1	chr9	+	1075	2	ISM	ENSMUSG00000032434.10	ENSMUST00000035007.10	3383	4	8930	1886	8930	-1886	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTAGGCTGGGATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	114569170	114576526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114569226_114575506
ENSMUSG00000032435.10_114518276_114538372_1	chr9	+	228	2	NNC	ENSMUSG00000032435.10	novel	235	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACGAAGGTTAGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	114518275	114538372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_114518351_114538219
ENSMUSG00000032435.10_114518276_114538372_2	chr9	+	235	2	FSM	ENSMUSG00000032435.10	ENST00000502347.1	235	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACGAAGGTTAGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	114518275	114538372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_114518351_114538212
ENSMUSG00000032435.10_114518309_114535126_1	chr9	+	211	3	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	451	18244	33	-3246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTCAAGTTCTCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	114518308	114535126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114518351_114534121_114534239_114535074
ENSMUSG00000032435.10_114534208_114535219_1	chr9	+	176	2	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	16350	18151	15932	-3153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACAGAAATGGGCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	114534207	114535219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114534239_114535074
ENSMUSG00000032435.10_114535173_114538264_1	chr9	+	185	2	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	17315	15106	16897	-108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCAGCGAAGAACCACTG	NA	NA	NA	NA	NA	NA	NA	NA	114535172	114538264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114535306_114538212
ENSMUSG00000032435.10_114535230_114538312_1	chr9	+	176	2	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	17372	15058	16954	-60	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCCCCTGGGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	114535229	114538312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114535306_114538212
ENSMUSG00000032435.10_114535279_114538377_1	chr9	+	192	2	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	17421	14993	17003	5	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGGTTAGTTTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	114535278	114538377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114535306_114538212
ENSMUSG00000032435.10_114538258_114542635_1	chr9	+	183	2	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	20400	10735	19982	4263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGTCTCACATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	114538257	114542635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114538383_114542577
ENSMUSG00000032435.10_114538332_114544183_1	chr9	+	167	3	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	20474	9187	20056	5811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCAGTAAAAGAGAACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	114538331	114544183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114538383_114542577_114542672_114544161
ENSMUSG00000032435.10_114544251_114546964_1	chr9	+	193	3	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	26393	6406	25975	-6406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGTGTTTCTGATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	114544250	114546964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114544298_114544667_114544780_114546930
ENSMUSG00000032435.10_114544746_114549658_1	chr9	+	181	4	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	26888	3712	26470	-3712	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATCTGTGTCATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	114544745	114549658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114544780_114546930_114546991_114548925_114548971_114549616
ENSMUSG00000032435.10_114546945_114549718_1	chr9	+	193	3	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	29087	3652	28669	-3652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGATCCAAACATGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	114546944	114549718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114546991_114548925_114548971_114549616
ENSMUSG00000032435.10_114548923_114550788_1	chr9	+	185	3	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	31065	2582	30647	-2582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTCCTGGCGAATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	114548922	114550788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114548971_114549616_114549738_114550772
ENSMUSG00000032435.10_114549662_114550865_1	chr9	+	169	2	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	31804	2505	31386	-2505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGGAGGAGGGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	114549661	114550865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114549738_114550772
ENSMUSG00000032435.10_114550786_114552362_1	chr9	+	182	2	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	32928	1008	32510	-1008	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCACACGGAAACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	114550785	114552362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114550926_114552320
ENSMUSG00000032435.10_114550892_114552468_1	chr9	+	182	2	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	33034	902	32616	-902	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGACAGCTTGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	114550891	114552468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114550926_114552320
ENSMUSG00000032437.11_115071974_115075216_1	chr9	-	1244	2	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	64273	325	64273	-325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATAAATGGAGATTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	115075216	115071973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115073114_115075112
ENSMUSG00000032437.11_115072271_115079933_1	chr9	-	1257	4	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	59556	622	59556	-622	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGCTGTTACCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	115079933	115072270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846
ENSMUSG00000032437.11_115072422_115080776_1	chr9	-	1224	5	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	58713	773	58713	-773	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGTTTGTGTTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	115080776	115072421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745
ENSMUSG00000032437.11_115072525_115080883_1	chr9	-	1228	5	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	58606	876	58606	-876	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCGGTGTGAAGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	115080883	115072524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745
ENSMUSG00000032437.11_115072703_115081706_1	chr9	-	1224	6	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	57783	1054	57783	-1054	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCAACTTTTTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	115081706	115072702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566
ENSMUSG00000032437.11_115072818_115082968_1	chr9	-	1225	7	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	56521	1169	56521	-1169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGGCAGAAGATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	115082968	115072817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900
ENSMUSG00000032437.11_115073004_115083898_1	chr9	-	1225	8	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	55591	1355	55591	-1355	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAGAGAACCGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	115083898	115073003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856
ENSMUSG00000032437.11_115073030_115083979_1	chr9	-	1280	8	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	55510	1381	55510	-1381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTTCTGGCCTCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	115083979	115073029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856
ENSMUSG00000032437.11_115075235_115086579_1	chr9	-	1231	9	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	52910	3586	52910	-3586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATCAGAGCACTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	115086579	115075234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503
ENSMUSG00000032437.11_115077573_115087628_1	chr9	-	1310	9	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	51861	5924	51861	-5924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTCAATTGAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	115087628	115077572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529
ENSMUSG00000032437.11_115079939_115096443_1	chr9	-	1270	10	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	43046	8290	43046	-8290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGGAGTGATTGGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	115096443	115079938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377
ENSMUSG00000032437.11_115080794_115105897_1	chr9	-	1266	10	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	33592	9145	33592	-9145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACTCTGGTGGATAACAA	NA	NA	NA	NA	NA	NA	NA	NA	115105897	115080793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771
ENSMUSG00000032437.11_115080853_115105942_1	chr9	-	1252	10	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	33547	9204	33547	-9204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCCGGGTCATGTCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	115105942	115080852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771
ENSMUSG00000032437.11_115081567_115106059_1	chr9	-	1304	9	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	33430	9918	33430	-9918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGGACAACTTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	115106059	115081566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771
ENSMUSG00000032437.11_115081708_115109531_1	chr9	-	1216	10	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	29958	10059	29958	-10059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTTGGGCCCCAACATCA	NA	NA	NA	NA	NA	NA	NA	NA	115109531	115081707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478
ENSMUSG00000032437.11_115082926_115138845_1	chr9	-	1226	10	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	644	11277	644	-11277	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCAGGAAACTTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	115138845	115082925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ENSMUSG00000032437.11_115083050_115138972_1	chr9	-	1229	10	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	517	11401	517	-11401	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCCCGGTCGTCTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	115138972	115083049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ENSMUSG00000032437.11_115083930_115139119_1	chr9	-	1240	9	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	370	12281	370	-12281	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTCTTGTATGTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	115139119	115083929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ENSMUSG00000032437.11_115083989_115139163_1	chr9	-	1225	9	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	326	12340	326	-12340	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCATCAGTGTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	115139163	115083988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ENSMUSG00000032437.11_115086612_115139366_1	chr9	-	1248	7	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	123	14963	123	-14963	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGAGACCGGTTGACA	NA	NA	NA	NA	NA	NA	NA	NA	115139366	115086611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ENSMUSG00000032437.11_115087528_115139489_1	chr9	-	1334	6	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	0	15879	0	-15879	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAACTAGTTTGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	115139489	115087527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ENSMUSG00000032440.14_115916102_115934218_1	chr9	-	3769	3	ISM	ENSMUSG00000032440.14	ENSMUST00000035014.8	3476	7	70210	-1895	70115	1895	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTCATGTCTCTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	115934218	115916101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115919626_115922013_115922142_115934101
ENSMUSG00000032440.14_115916320_115938707_1	chr9	-	3712	4	ISM	ENSMUSG00000032440.14	ENSMUST00000035014.8	3476	7	65721	-1677	65626	1677	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATAGAAAAGTGTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	115938707	115916319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115919626_115922013_115922142_115934101_115934244_115938571
ENSMUSG00000032440.14_115916614_115939057_1	chr9	-	3768	4	ISM	ENSMUSG00000032440.14	ENSMUST00000035014.8	3476	7	65371	-1383	65276	1383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTGATCACCTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	115939057	115916613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115919626_115922013_115922142_115934101_115934244_115938571
ENSMUSG00000032440.14_115917081_115958976_1	chr9	-	3708	5	ISM	ENSMUSG00000032440.14	ENSMUST00000035014.8	3476	7	45452	-916	45357	916	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGAATATGGTGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	115958976	115917080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_115919626_115922013_115922142_115934101_115934244_115938571_115939372_115958883
ENSMUSG00000032440.14_115917577_116004159_1	chr9	-	3702	8	FSM	ENSMUSG00000032440.14	ENSMUST00000061101.12	8092	8	174	4216	174	420	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTACTGGTCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	116004159	115917576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_115919626_115922013_115922142_115934101_115934244_115938571_115939372_115958883_115959075_115960612_115960782_115987338_115987414_116004011
ENSMUSG00000032449.14_96959537_96962395_1	chr9	-	1906	2	ISM	ENSMUSG00000032449.14	ENSMUST00000035024.8	4043	3	4128	1919	4128	-1919	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAAATTTCTCACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	96962395	96959536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_96961293_96962245
ENSMUSG00000032449.14_96959585_96962457_1	chr9	-	1920	2	ISM	ENSMUSG00000032449.14	ENSMUST00000035024.8	4043	3	4066	1967	4066	-1967	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGCCATTGAAAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	96962457	96959584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_96961293_96962245
ENSMUSG00000032456.14_98236072_98281569_1	chr9	+	207	2	ISM	ENSMUSG00000032456.14	ENST00000512391.5	393	3	3	10620	3	-10620	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGGCTTCCCATCACC	NA	NA	NA	NA	NA	NA	NA	NA	98236071	98281569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98236218_98281508
ENSMUSG00000032456.14_98236074_98292642_1	chr9	+	657	2	ISM	ENSMUSG00000032456.14	ENST00000413939.6	1246	3	5	833	5	163	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGGTCATAAGATTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	98236073	98292642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98236218_98292129
ENSMUSG00000032456.14_98236115_98281619_1	chr9	+	214	2	ISM	ENSMUSG00000032456.14	ENST00000512391.5	393	3	46	10570	46	-10570	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGACTGGATTCGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	98236114	98281619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98236218_98281508
ENSMUSG00000032456.14_98236129_98292698_1	chr9	+	658	2	ISM	ENSMUSG00000032456.14	ENST00000413939.6	1246	3	60	777	60	219	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATGGGAGGCACACTGA	NA	NA	NA	NA	NA	NA	NA	NA	98236128	98292698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98236218_98292129
ENSMUSG00000032456.14_98236172_98281665_1	chr9	+	203	2	ISM	ENSMUSG00000032456.14	ENST00000512391.5	393	3	103	10524	103	-10524	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATGGAAACGGTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	98236171	98281665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98236218_98281508
ENSMUSG00000032456.14_98236182_98292750_1	chr9	+	657	2	ISM	ENSMUSG00000032456.14	ENST00000413939.6	1246	3	113	725	113	271	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAAGTCGCCTTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	98236181	98292750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98236218_98292129
ENSMUSG00000032456.14_98281508_98293462_1	chr9	+	1344	4	NNC	ENSMUSG00000032456.14	novel	1363	4	NA	NA	1	-13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGACATCAAAAATACTAAT	NA	NA	NA	NA	NA	NA	NA	NA	98281507	98293462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_98281693_98285586_98285667_98292129_98292985_98293238
ENSMUSG00000032456.14_98281508_98293462_2	chr9	+	1349	4	FSM	ENSMUSG00000032456.14	ENST00000339837.9	1363	4	1	13	1	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	2541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGACATCAAAAATACTAAT	NA	NA	NA	NA	NA	NA	NA	NA	98281507	98293462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_98281693_98285586_98285667_98292129_98292985_98293233
ENSMUSG00000032456.14_98281616_98292190_1	chr9	+	138	2	FSM	ENSMUSG00000032456.14	ENST00000511444.5	536	2	109	289	109	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTGGAAAGACACGCACA	NA	NA	NA	NA	NA	NA	NA	NA	98281615	98292190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_98281693_98292129
ENSMUSG00000032458.7_98445784_98459437_1	chr9	+	1041	9	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	0	10998	0	-10998	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCAGAAGTCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	98445783	98459437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380
ENSMUSG00000032458.7_98445784_98459490_1	chr9	+	1094	9	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	0	10945	0	-10945	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGATGGAGAAAGATTGC	NA	NA	NA	NA	NA	NA	NA	NA	98445783	98459490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380
ENSMUSG00000032458.7_98450156_98461092_1	chr9	+	1040	9	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	4372	9343	4372	-9343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGAGCTTCGGGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	98450155	98461092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033
ENSMUSG00000032458.7_98452382_98462150_1	chr9	+	1057	9	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	6598	8285	6598	-8285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAACAGTATTGTAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	98452381	98462150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134
ENSMUSG00000032458.7_98452695_98462345_1	chr9	+	1042	9	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	6911	8090	6911	-8090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGGCTTAGCCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	98452694	98462345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310
ENSMUSG00000032458.7_98453564_98463275_1	chr9	+	1117	9	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	7780	7160	7780	-7160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCACAGGAAACACATGAG	NA	NA	NA	NA	NA	NA	NA	NA	98453563	98463275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187
ENSMUSG00000032458.7_98453625_98463275_1	chr9	+	1056	9	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	7841	7160	7841	-7160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCACAGGAAACACATGAG	NA	NA	NA	NA	NA	NA	NA	NA	98453624	98463275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187
ENSMUSG00000032458.7_98453656_98463331_1	chr9	+	1081	9	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	7872	7104	7872	-7104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTCTGAGTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	98453655	98463331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187
ENSMUSG00000032458.7_98455564_98464386_1	chr9	+	1027	9	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	9780	6049	9780	-6049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGTTCTGTGAACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	98455563	98464386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324
ENSMUSG00000032458.7_98456140_98464826_1	chr9	+	1088	9	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	10356	5609	10356	-5609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTTCAGTCCTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	98456139	98464826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742
ENSMUSG00000032458.7_98459010_98464950_1	chr9	+	1134	8	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	13226	5485	13226	-5485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAAGTTTTGCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	98459009	98464950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742
ENSMUSG00000032458.7_98459379_98467146_1	chr9	+	1103	8	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	13595	3289	13595	-3289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTTTAATCCAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	98459378	98467146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035
ENSMUSG00000032458.7_98459512_98468055_1	chr9	+	1041	9	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	13728	2380	13728	-2380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACCATGCTCAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	98459511	98468055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984
ENSMUSG00000032458.7_98461032_98468199_1	chr9	+	1118	8	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	15248	2236	15248	-2236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTATCTCAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	98461031	98468199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984
ENSMUSG00000032458.7_98462131_98469185_1	chr9	+	1102	8	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	16347	1250	16347	-1250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGATTTAGTTTAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	98462130	98469185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092
ENSMUSG00000032458.7_98462357_98469353_1	chr9	+	1039	8	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	16573	1082	16573	-1082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAAACCTTTTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	98462356	98469353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277
ENSMUSG00000032458.7_98463184_98469458_1	chr9	+	1087	7	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	17400	977	17400	-977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGCAGAGTACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	98463183	98469458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277
ENSMUSG00000032458.7_98464405_98470157_1	chr9	+	1057	9	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	18621	278	18621	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTAATCTGGATGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	98464404	98470157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ENSMUSG00000032458.7_98464780_98470314_1	chr9	+	1126	8	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	18996	121	18996	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	673	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGGAGTTGATGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	98464779	98470314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ENSMUSG00000032458.7_98467034_98470435_1	chr9	+	1078	7	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	21250	0	21250	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTTGAGTTTCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	98467033	98470435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ENSMUSG00000032458.7_98468102_98472213_1	chr9	+	613	6	ISM	ENSMUSG00000032458.7	ENST00000503326.6	2924	22	22346	81	22318	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATTAGCAAAGGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	98468101	98472213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98472110
ENSMUSG00000032458.7_98468171_98472255_1	chr9	+	586	6	ISM	ENSMUSG00000032458.7	ENST00000503326.6	2924	22	22415	39	22387	-39	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTGCCAATTCTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	98468170	98472255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98472110
ENSMUSG00000032462.15_98920454_98926921_1	chr9	-	1853	4	ISM	ENSMUSG00000032462.15	ENST00000544716.5	2942	12	19340	-18	19340	18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGTGTCTTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	98926921	98920453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797
ENSMUSG00000032462.15_98920786_98936051_1	chr9	-	1812	7	ISM	ENSMUSG00000032462.15	ENST00000544716.5	2942	12	10210	314	10210	-314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTCAAATTGACGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	98936051	98920785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934453_98936023
ENSMUSG00000032462.15_98920873_98936099_1	chr9	-	1773	7	ISM	ENSMUSG00000032462.15	ENST00000544716.5	2942	12	10162	401	10162	-401	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTAAATTTCAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	98936099	98920872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934453_98936023
ENSMUSG00000032462.15_98921084_98942263_1	chr9	-	1801	9	ISM	ENSMUSG00000032462.15	ENST00000544716.5	2942	12	3998	612	3998	-612	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTCAAGTTTTACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	98942263	98921083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934453_98936023_98936134_98937394_98937574_98942237
ENSMUSG00000032462.15_98921262_98943836_1	chr9	-	1750	10	ISM	ENSMUSG00000032462.15	ENST00000544716.5	2942	12	2425	790	2425	-790	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGTTAATATTTATC	NA	NA	NA	NA	NA	NA	NA	NA	98943836	98921261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934453_98936023_98936134_98937394_98937574_98942237_98942338_98943783
ENSMUSG00000032462.15_98921367_98944919_1	chr9	-	1766	11	ISM	ENSMUSG00000032462.15	ENST00000544716.5	2942	12	1342	895	1342	-895	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGACCTCCCTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	98944919	98921366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934453_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889
ENSMUSG00000032462.15_98921482_98946130_1	chr9	-	1801	12	FSM	ENSMUSG00000032462.15	ENST00000544716.5	2942	12	131	1010	131	-1010	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGTATTTGGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	98946130	98921481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934453_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072
ENSMUSG00000032462.15_98921548_98946167_1	chr9	-	1772	12	FSM	ENSMUSG00000032462.15	ENST00000544716.5	2942	12	94	1076	94	-1076	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTCCTGCTGACCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	98946167	98921547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934453_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072
ENSMUSG00000032462.15_98921611_98946206_1	chr9	-	1748	12	FSM	ENSMUSG00000032462.15	ENST00000544716.5	2942	12	55	1139	55	-1139	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCATGCCCACCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	98946206	98921610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934453_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072
ENSMUSG00000032463.11_98881019_98883955_1	chr9	+	399	2	ISM	ENSMUSG00000032463.11	ENSMUST00000035038.8	1019	5	12593	119	12592	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGTGTTTCTAATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	98881018	98883955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_98881070_98883607
ENSMUSG00000032468.12_99362763_99370012_1	chr9	-	331	4	ISM	ENSMUSG00000032468.12	ENST00000485396.5	1911	20	80713	-1	80690	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTTGTAAAAGGAAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	99370012	99362762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916
ENSMUSG00000032468.12_99366045_99379373_1	chr9	-	317	4	ISM	ENSMUSG00000032468.12	ENST00000485396.5	1911	20	71352	3281	71329	-3281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTCATATGGAACGAAG	NA	NA	NA	NA	NA	NA	NA	NA	99379373	99366044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_99366092_99369916_99370013_99378203_99378300_99379295
ENSMUSG00000032468.12_99378258_99384594_1	chr9	-	315	4	ISM	ENSMUSG00000032468.12	ENST00000485396.5	1911	20	66131	15494	66108	-15494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTGTCACTCTGATACT	NA	NA	NA	NA	NA	NA	NA	NA	99384594	99378257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_99378300_99379295_99379446_99381345_99381439_99384564
ENSMUSG00000032468.12_99387361_99405258_1	chr9	-	285	4	ISM	ENSMUSG00000032468.12	ENST00000485396.5	1911	20	45467	24597	45444	13496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTCCAGGATCATG	NA	NA	NA	NA	NA	NA	NA	NA	99405258	99387360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_99387400_99387702_99387786_99402539_99402636_99405191
ENSMUSG00000032468.12_99405192_99408963_1	chr9	-	282	3	ISM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	41739	4335	41739	-4335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGCCTCTGGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	99408963	99405191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_99405393_99407405_99407467_99408943
ENSMUSG00000032468.12_99405236_99450847_1	chr9	-	1142	11	ISM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-145	4379	105	-4379	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTATCCCAGCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	99450847	99405235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ENSMUSG00000032468.12_99405353_99411412_1	chr9	-	297	5	ISM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	39290	4496	39290	-4496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTAGAGGAGAGAGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	99411412	99405352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383
ENSMUSG00000032468.12_99409156_99418305_1	chr9	-	321	4	ISM	ENSMUSG00000032468.12	ENST00000485396.5	1911	20	32420	46392	32397	-8299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCGATGACCCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	99418305	99409155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_99409208_99411383_99411465_99417847_99417946_99418215
ENSMUSG00000032469.13_99458133_99466123_1	chr9	+	1549	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	281	431	281	-431	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGGGCAGAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	99458132	99466123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
ENSMUSG00000032469.13_99458646_99466240_1	chr9	+	1603	7	ISM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	794	314	794	-314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTTCATATGAGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	99458645	99466240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
ENSMUSG00000032469.13_99462255_99466554_1	chr9	+	1579	4	ISM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	4403	0	4403	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCCATCCTGCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	99462254	99466554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_99462417_99464074_99464156_99464369_99464516_99465364
ENSMUSG00000032470.18_99275054_99318821_1	chr9	-	579	4	FSM	ENSMUSG00000032470.18	ENST00000423968.7	634	4	0	55	0	-55	multi-exon	FALSE	canonical	NA	NA	NA	NA	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCTAAGGAAAGTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	99318821	99275053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_99275099_99276521_99276676_99293445_99293656_99318651
ENSMUSG00000032470.18_99275054_99318821_2	chr9	-	577	4	NNC	ENSMUSG00000032470.18	novel	634	4	NA	NA	0	-55	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCTAAGGAAAGTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	99318821	99275053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_99275099_99276521_99276676_99293445_99293656_99318653
ENSMUSG00000032475.16_100377353_100379677_1	chr9	-	739	2	ISM	ENSMUSG00000032475.16	ENSMUST00000112874.4	1513	3	9232	297	9232	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCATCTCTATAGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	100379677	100377352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_100377725_100379310
ENSMUSG00000032475.16_100377493_100379746_1	chr9	-	668	2	ISM	ENSMUSG00000032475.16	ENSMUST00000112874.4	1513	3	9163	437	9163	-437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCATGTAACTGGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	100379746	100377492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_100377725_100379310
ENSMUSG00000032477.15_109704768_109722979_1	chr9	+	3508	15	NNC	ENSMUSG00000032477.15	novel	3510	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATATACTCAACTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	109704767	109722979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713561_109716315_109716415_109717941_109718005_109718100_109718199_109718778_109718910_109720812_109720925_109721146
ENSMUSG00000032477.15_109704768_109722979_2	chr9	+	3509	15	FSM	ENSMUSG00000032477.15	ENST00000302506.8	3510	15	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATATACTCAACTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	109704767	109722979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713561_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ENSMUSG00000032477.15_109704768_109722979_3	chr9	+	3507	15	NNC	ENSMUSG00000032477.15	novel	3510	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	835	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATATACTCAACTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	109704767	109722979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713561_109716317_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ENSMUSG00000032477.15_109704768_109722979_4	chr9	+	3486	14	NNC	ENSMUSG00000032477.15	novel	3510	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATATACTCAACTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	109704767	109722979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_109705228_109706228_109706323_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713561_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ENSMUSG00000032477.15_109704768_109722979_5	chr9	+	3500	15	NNC	ENSMUSG00000032477.15	novel	3510	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATATACTCAACTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	109704767	109722979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713195_109713262_109713410_109713561_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ENSMUSG00000032477.15_109704768_109722979_6	chr9	+	3502	15	NNC	ENSMUSG00000032477.15	novel	3510	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATATACTCAACTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	109704767	109722979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713561_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720918_109721146
ENSMUSG00000032477.15_109704768_109722979_7	chr9	+	3507	15	NNC	ENSMUSG00000032477.15	novel	3510	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATATACTCAACTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	109704767	109722979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713561_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720814_109720925_109721146
ENSMUSG00000032478.15_109662359_109671597_1	chr9	+	593	5	NNC	ENSMUSG00000032478.15	novel	766	6	NA	NA	82	-71	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCAGCTGCGGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	109662358	109671597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_109662494_109664390_109664483_109668675_109668803_109670994_109671156_109671519
ENSMUSG00000032478.15_109662359_109671648_1	chr9	+	659	6	NNC	ENSMUSG00000032478.15	novel	766	6	NA	NA	82	-20	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTGCAGCTGAAACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	109662358	109671648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_109662494_109664390_109664483_109668675_109668779_109670543_109670584_109670995_109671156_109671519
ENSMUSG00000032478.15_109662359_109671659_1	chr9	+	671	6	FSM	ENSMUSG00000032478.15	ENST00000452211.5	766	6	82	13	82	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAGGAGGCCACAAACA	NA	NA	NA	NA	NA	NA	NA	NA	109662358	109671659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_109662494_109664390_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ENSMUSG00000032478.15_109662359_109671669_1	chr9	+	665	5	NNC	ENSMUSG00000032478.15	novel	766	6	NA	NA	82	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCACAAACAACCTAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	109662358	109671669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_109662494_109664390_109664483_109668675_109668803_109670994_109671156_109671519
ENSMUSG00000032478.15_109662359_109671672_1	chr9	+	683	6	NNC	ENSMUSG00000032478.15	novel	766	6	NA	NA	82	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAACAACCTAACAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	109662358	109671672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_109662494_109664390_109664483_109668675_109668779_109670543_109670584_109670995_109671156_109671519
ENSMUSG00000032478.15_109664446_109671597_1	chr9	+	379	4	FSM	ENSMUSG00000032478.15	ENST00000435684.5	506	4	56	71	56	-71	multi-exon	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCAGCTGCGGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	109664445	109671597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_109664483_109668675_109668779_109670994_109671156_109671519
ENSMUSG00000032479.16_109910572_109913014_1	chr9	+	2319	2	ISM	ENSMUSG00000032479.16	ENSMUST00000163979.7	3320	11	18913	-776	18913	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTATGTTGCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	109910571	109913014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_109910679_109910802
ENSMUSG00000032481.18_110002961_110025372_1	chr9	+	999	10	ISM	ENSMUSG00000032481.18	ENSMUST00000197984.5	3538	27	41856	38987	41856	12001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCCCTTTCAGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	110002960	110025372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220
ENSMUSG00000032481.18_110025350_110068359_1	chr9	+	2668	9	ISM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	64302	887	64245	-887	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCCCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	110025349	110068359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ENSMUSG00000032481.18_110051059_110069246_1	chr9	+	2703	3	ISM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	90011	0	89954	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCATTCTCTGCATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	110051058	110069246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110051225_110063944_110064122_110066886
ENSMUSG00000032482.10_110074551_110075750_1	chr9	+	600	2	ISM	ENSMUSG00000032482.10	ENSMUST00000197850.5	7868	4	-48	15881	-48	-15881	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCATGATAAGCCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	110074550	110075750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110074763_110075362
ENSMUSG00000032482.10_110074599_110075793_1	chr9	+	595	2	ISM	ENSMUSG00000032482.10	ENSMUST00000197850.5	7868	4	0	15838	0	-15838	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTTGGAGGTTCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	110074598	110075793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110074763_110075362
ENSMUSG00000032482.10_110074599_110075852_1	chr9	+	654	2	ISM	ENSMUSG00000032482.10	ENSMUST00000197850.5	7868	4	0	15779	0	-15779	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGCACTCTCGAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	110074598	110075852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110074763_110075362
ENSMUSG00000032482.10_110075894_110080058_1	chr9	+	597	2	ISM	ENSMUSG00000032482.10	ENSMUST00000199736.2	2107	4	761	11585	761	-11573	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGCGCTGTGAGTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	110075893	110080058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110076459_110080026
ENSMUSG00000032482.10_110075956_110080110_1	chr9	+	587	2	ISM	ENSMUSG00000032482.10	ENSMUST00000199736.2	2107	4	823	11533	823	-11521	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTCGGCTGCTCTCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	110075955	110080110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110076459_110080026
ENSMUSG00000032482.10_110075993_110080207_1	chr9	+	647	2	ISM	ENSMUSG00000032482.10	ENSMUST00000199736.2	2107	4	860	11436	860	-11424	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACCAAGTAAGTCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	110075992	110080207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110076459_110080026
ENSMUSG00000032482.10_110076169_110091236_1	chr9	+	588	3	ISM	ENSMUSG00000032482.10	ENST00000610462.1	2053	4	1670	395	1036	-395	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGACCAGGATGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	110076168	110091236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110076459_110080026_110080216_110091127
ENSMUSG00000032482.10_110076251_110091316_1	chr9	+	586	3	ISM	ENSMUSG00000032482.10	ENST00000610462.1	2053	4	1752	315	1118	-315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGGAGGGAAGGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	110076250	110091316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110076459_110080026_110080216_110091127
ENSMUSG00000032482.10_110076301_110091393_1	chr9	+	613	3	ISM	ENSMUSG00000032482.10	ENST00000610462.1	2053	4	1802	238	1168	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTCATGGCATGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	110076300	110091393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110076459_110080026_110080216_110091127
ENSMUSG00000032482.10_110080118_110091631_1	chr9	+	602	2	ISM	ENSMUSG00000032482.10	ENST00000610462.1	2053	4	5619	0	4985	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTGTCCACTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	110080117	110091631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110080216_110091127
ENSMUSG00000032485.15_110162424_110213197_1	chr9	+	3608	21	ISM	ENSMUSG00000032485.15	ENSMUST00000098350.10	4227	23	0	821	0	-821	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTACATTGATCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	110162423	110213197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110162574_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133
ENSMUSG00000032485.15_110191461_110213672_1	chr9	+	3513	21	ISM	ENSMUSG00000032485.15	ENSMUST00000098350.10	4227	23	29037	346	29037	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCGGCGGCCAGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	110191460	110213672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ENSMUSG00000032485.15_110201263_110213844_1	chr9	+	3556	20	ISM	ENSMUSG00000032485.15	ENSMUST00000098350.10	4227	23	38839	174	38839	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGCTGGAGAAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	110201262	110213844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ENSMUSG00000032485.15_110201307_110213918_1	chr9	+	3586	20	ISM	ENSMUSG00000032485.15	ENSMUST00000098350.10	4227	23	38883	100	38883	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGATAGCAACTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	110201306	110213918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ENSMUSG00000032485.15_110201379_110214018_1	chr9	+	3614	20	ISM	ENSMUSG00000032485.15	ENSMUST00000098350.10	4227	23	38955	0	38955	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGGCTGAAGTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	110201378	110214018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ENSMUSG00000032489.18_110312128_110350432_1	chr9	+	2128	18	NNC	ENSMUSG00000032489.18	novel	2133	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTGGACATTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	110312127	110350432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_110312227_110314102_110314269_110317603_110317711_110318903_110319129_110323469_110323554_110323659_110323753_110324878_110325027_110325984_110326050_110330656_110330735_110335260_110335325_110335728_110335834_110338525_110338582_110339448_110339540_110340388_110340523_110346572_110346788_110348102_110348280_110348567_110348684_110350327
ENSMUSG00000032489.18_110312128_110350432_2	chr9	+	2128	18	NNC	ENSMUSG00000032489.18	novel	2133	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTGGACATTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	110312127	110350432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_110312227_110314102_110314269_110317603_110317711_110318903_110319129_110323469_110323554_110323659_110323753_110324878_110325027_110325984_110326050_110330656_110330735_110335260_110335330_110335728_110335834_110338525_110338582_110339448_110339540_110340388_110340523_110346572_110346788_110348107_110348280_110348567_110348684_110350327
ENSMUSG00000032489.18_110312128_110350432_3	chr9	+	2125	18	NNC	ENSMUSG00000032489.18	novel	2133	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTGGACATTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	110312127	110350432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_110312227_110314102_110314269_110317603_110317711_110318911_110319129_110323469_110323554_110323659_110323753_110324878_110325027_110325984_110326050_110330656_110330735_110335260_110335330_110335728_110335834_110338525_110338582_110339448_110339540_110340388_110340523_110346572_110346788_110348102_110348280_110348567_110348684_110350327
ENSMUSG00000032489.18_110312128_110350432_4	chr9	+	2125	18	NNC	ENSMUSG00000032489.18	novel	2133	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTGGACATTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	110312127	110350432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_110312227_110314102_110314261_110317603_110317711_110318903_110319129_110323469_110323554_110323659_110323753_110324878_110325027_110325984_110326050_110330656_110330735_110335260_110335330_110335728_110335834_110338525_110338582_110339448_110339540_110340388_110340523_110346572_110346788_110348102_110348280_110348567_110348684_110350327
ENSMUSG00000032489.18_110312128_110350432_5	chr9	+	2133	18	FSM	ENSMUSG00000032489.18	ENST00000444589.6	2133	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTGGACATTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	110312127	110350432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_110312227_110314102_110314269_110317603_110317711_110318903_110319129_110323469_110323554_110323659_110323753_110324878_110325027_110325984_110326050_110330656_110330735_110335260_110335330_110335728_110335834_110338525_110338582_110339448_110339540_110340388_110340523_110346572_110346788_110348102_110348280_110348567_110348684_110350327
ENSMUSG00000032489.18_110312128_110350432_6	chr9	+	2126	18	NNC	ENSMUSG00000032489.18	novel	2133	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTGGACATTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	110312127	110350432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_110312227_110314102_110314269_110317603_110317711_110318903_110319129_110323469_110323554_110323659_110323753_110324885_110325027_110325984_110326050_110330656_110330735_110335260_110335330_110335728_110335834_110338525_110338582_110339448_110339540_110340388_110340523_110346572_110346788_110348102_110348280_110348567_110348684_110350327
ENSMUSG00000032489.18_110312128_110350432_7	chr9	+	2127	18	NNC	ENSMUSG00000032489.18	novel	2133	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTGGACATTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	110312127	110350432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_110312227_110314102_110314269_110317603_110317711_110318903_110319129_110323469_110323554_110323659_110323753_110324878_110325027_110325984_110326050_110330656_110330735_110335260_110335330_110335728_110335834_110338525_110338582_110339448_110339540_110340388_110340523_110346578_110346788_110348102_110348280_110348567_110348684_110350327
ENSMUSG00000032489.18_110312128_110350432_8	chr9	+	2128	18	NNC	ENSMUSG00000032489.18	novel	2133	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTGGACATTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	110312127	110350432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_110312227_110314102_110314269_110317603_110317711_110318903_110319129_110323469_110323554_110323659_110323753_110324878_110325027_110325984_110326050_110330656_110330735_110335260_110335330_110335728_110335834_110338525_110338582_110339448_110339540_110340388_110340523_110346572_110346788_110348102_110348280_110348567_110348679_110350327
ENSMUSG00000032491.15_110450203_110452223_1	chr9	-	1005	4	ISM	ENSMUSG00000032491.15	ENSMUST00000035069.14	1223	5	1297	0	1297	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTTGGCTCCTTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	110452223	110450202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154
ENSMUSG00000032491.15_110450203_110452390_1	chr9	-	1166	4	NNC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	1130	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTTGGCTCCTTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	110452390	110450202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_110450806_110450907_110451051_110451139_110451324_110452154
ENSMUSG00000032491.15_110450338_110453450_1	chr9	-	1018	5	FSM	ENSMUSG00000032491.15	ENSMUST00000035069.14	1223	5	70	135	70	-135	multi-exon	FALSE	canonical	NA	NA	NA	NA	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGGGGGGGTGGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	110453450	110450337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452304_110453382
ENSMUSG00000032492.15_110551210_110571410_1	chr9	-	1930	14	FSM	ENSMUSG00000032492.15	ENST00000430002.6	1871	14	0	-59	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	110571410	110551209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_110551693_110552643_110552696_110552777_110552920_110553466_110553562_110553794_110553862_110554180_110554242_110555510_110555665_110556037_110556234_110556478_110556574_110556745_110556865_110556965_110557077_110558662_110558798_110560605_110560709_110571293
ENSMUSG00000032497.20_110947203_111053290_1	chr9	+	1812	15	NNC	ENSMUSG00000032497.20	novel	1839	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGGATTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	110947202	111053290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052338_111052439_111053017
ENSMUSG00000032497.20_110947203_111053290_2	chr9	+	1810	15	NNC	ENSMUSG00000032497.20	novel	1839	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGGATTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	110947202	111053290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111045003_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ENSMUSG00000032497.20_110947203_111053290_3	chr9	+	1812	15	NNC	ENSMUSG00000032497.20	novel	1839	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	845	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGGATTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	110947202	111053290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048754_111048871_111051225_111051306_111052333_111052439_111053017
ENSMUSG00000032497.20_110947203_111053402_1	chr9	+	1857	14	FSM	ENSMUSG00000032497.20	ENSMUST00000098340.7	3191	14	0	1334	0	108	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACAGAGGCACTGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	110947202	111053402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ENSMUSG00000032497.20_111019281_111053942_1	chr9	+	1750	9	ISM	ENSMUSG00000032497.20	ENSMUST00000217117.2	1363	12	7886	-652	7886	648	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTAAAGAAGCCTTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	111019280	111053942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ENSMUSG00000032497.20_111052359_111054736_1	chr9	+	1799	2	ISM	ENSMUSG00000032497.20	ENSMUST00000217117.2	1363	12	40964	-1446	40964	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGCATCCTGTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	111052358	111054736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_111052439_111053017
ENSMUSG00000032498.10_111057323_111078381_1	chr9	-	1697	10	ISM	ENSMUSG00000032498.10	ENST00000435176.5	2165	18	18995	-201	18995	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	111078381	111057322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287
ENSMUSG00000032498.10_111057600_111086531_1	chr9	-	1729	14	ISM	ENSMUSG00000032498.10	ENST00000435176.5	2165	18	10845	76	10845	-76	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1749	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACAGAAGATGGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	111086531	111057599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467
ENSMUSG00000032498.10_111058956_111090611_1	chr9	-	1752	15	ISM	ENSMUSG00000032498.10	ENST00000435176.5	2165	18	6765	1432	6765	1012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1594	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCGGAAGCAGTATATACT	NA	NA	NA	NA	NA	NA	NA	NA	111090611	111058955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546
ENSMUSG00000032498.10_111059985_111097302_1	chr9	-	1697	15	ISM	ENSMUSG00000032498.10	ENST00000435176.5	2165	18	74	2461	74	-17	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1048	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGATCGATGAGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	111097302	111059984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093939_111094034_111097285
ENSMUSG00000032498.10_111060045_111097376_1	chr9	-	1716	15	ISM	ENSMUSG00000032498.10	ENSMUST00000035079.10	2754	19	3483	2722	0	-77	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGTACATTGTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	111097376	111060044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285
ENSMUSG00000032498.10_111060048_111097346_1	chr9	-	1678	15	ISM	ENSMUSG00000032498.10	ENST00000435176.5	2165	18	30	2524	30	-80	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	855	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCAGAGTACATTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	111097346	111060047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093939_111094034_111097285
ENSMUSG00000032498.10_111060076_111070346_1	chr9	-	370	4	ISM	ENSMUSG00000032498.10	ENST00000441265.6	1730	14	27031	108	27030	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGAGGACGACGGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	111070346	111060075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111060134_111064974_111065084_111068790_111068940_111070292
ENSMUSG00000032498.10_111064975_111096787_1	chr9	-	1607	13	ISM	ENSMUSG00000032498.10	ENST00000458205.6	2304	19	589	7451	589	-5007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	853	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATCTCTGTGAGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	111096787	111064974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111096652
ENSMUSG00000032498.10_111068809_111100734_1	chr9	-	1694	13	ISM	ENSMUSG00000032498.10	ENSMUST00000035079.10	2754	19	125	11486	125	-8841	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCGGTGCCATGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	111100734	111068808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ENSMUSG00000032498.10_111068817_111097350_1	chr9	-	1536	13	ISM	ENSMUSG00000032498.10	ENST00000458205.6	2304	19	26	11293	26	-8849	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTAGTGAGCGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	111097350	111068816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111096652_111096787_111097285
ENSMUSG00000032498.10_111082027_111100602_1	chr9	-	614	8	ISM	ENSMUSG00000032498.10	ENST00000536378.5	2204	18	-1	24503	-1	-22059	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAGGATAAAACCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	111100602	111082026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111100476
ENSMUSG00000032503.19_111894567_111948343_1	chr9	-	766	3	ISM	ENSMUSG00000032503.19	ENSMUST00000162065.8	2996	18	66494	265	66494	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTGTAGATTACAATATC	NA	NA	NA	NA	NA	NA	NA	NA	111948343	111894566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111895091_111896228_111896378_111948250
ENSMUSG00000032503.19_111895032_111956403_1	chr9	-	758	6	ISM	ENSMUSG00000032503.19	ENSMUST00000162065.8	2996	18	58434	730	58434	-630	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCCAGTCAGGCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	111956403	111895031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111895091_111896228_111896378_111948250_111948378_111953807_111954069_111955502_111955608_111956346
ENSMUSG00000032503.19_111948338_111965693_1	chr9	-	760	5	ISM	ENSMUSG00000032503.19	ENSMUST00000162065.8	2996	18	49144	54036	49144	-3050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTCACAGCAGTACCGA	NA	NA	NA	NA	NA	NA	NA	NA	111965693	111948337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111948378_111953807_111954069_111955502_111955608_111956346_111956529_111965521
ENSMUSG00000032503.19_111953905_111972454_1	chr9	-	757	5	ISM	ENSMUSG00000032503.19	ENSMUST00000162065.8	2996	18	42383	59603	42383	-8617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGGCTTCTCGGACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	111972454	111953904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111954069_111955502_111955608_111956346_111956529_111965521_111965750_111972376
ENSMUSG00000032503.19_111953955_111972521_1	chr9	-	774	5	ISM	ENSMUSG00000032503.19	ENSMUST00000162065.8	2996	18	42316	59653	42316	-8667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGCCACAGAGTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	111972521	111953954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111954069_111955502_111955608_111956346_111956529_111965521_111965750_111972376
ENSMUSG00000032503.19_111954026_111972559_1	chr9	-	741	5	ISM	ENSMUSG00000032503.19	ENSMUST00000162065.8	2996	18	42278	59724	42278	-8738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTCCTCGGGAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	111972559	111954025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111954069_111955502_111955608_111956346_111956529_111965521_111965750_111972376
ENSMUSG00000032503.19_111955503_111976550_1	chr9	-	805	5	ISM	ENSMUSG00000032503.19	ENSMUST00000162065.8	2996	18	38287	61201	38287	-10215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAGTATCATAAGCATAA	NA	NA	NA	NA	NA	NA	NA	NA	111976550	111955502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111955608_111956346_111956529_111965521_111965750_111972376_111972607_111976490
ENSMUSG00000032503.19_111956347_111986866_1	chr9	-	847	6	ISM	ENSMUSG00000032503.19	ENSMUST00000162065.8	2996	18	27971	62045	27971	-11059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGAGCTGGCCTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	111986866	111956346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111956529_111965521_111965750_111972376_111972607_111976490_111976551_111978402_111978441_111986757
ENSMUSG00000032503.19_111956479_112005185_1	chr9	-	738	7	ISM	ENSMUSG00000032503.19	ENSMUST00000162065.8	2996	18	9652	62177	9652	-11191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTCAGCAGACACTGCG	NA	NA	NA	NA	NA	NA	NA	NA	112005185	111956478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111956529_111965521_111965750_111972376_111972607_111976490_111976551_111978402_111978441_111986757_111986867_112005162
ENSMUSG00000032503.19_111965517_112005303_1	chr9	-	811	6	ISM	ENSMUSG00000032503.19	ENSMUST00000162065.8	2996	18	9534	71215	9534	-20229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTCTGCTCTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	112005303	111965516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111965750_111972376_111972607_111976490_111976551_111978402_111978441_111986757_111986867_112005162
ENSMUSG00000032503.19_111965690_112006784_1	chr9	-	757	8	ISM	ENSMUSG00000032503.19	ENSMUST00000162065.8	2996	18	8053	71388	8053	-20402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGCCCTGACCTCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	112006784	111965689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111965750_111972376_111972607_111976490_111976551_111978402_111978441_111986757_111986867_112005162_112005304_112006001_112006062_112006725
ENSMUSG00000032503.19_111972410_112008147_1	chr9	-	736	8	ISM	ENSMUSG00000032503.19	ENSMUST00000162065.8	2996	18	6690	78108	6690	17596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCAGGAGTGCTGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	112008147	111972409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111972607_111976490_111976551_111978402_111978441_111986757_111986867_112005162_112005304_112006001_112006062_112006725_112006805_112008095
ENSMUSG00000032503.19_111972544_112012608_1	chr9	-	741	9	ISM	ENSMUSG00000032503.19	ENSMUST00000162065.8	2996	18	2229	78242	2229	17462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGGCCAGACCACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	112012608	111972543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_111972607_111976490_111976551_111978402_111978441_111986757_111986867_112005162_112005304_112006001_112006062_112006725_112006805_112008095_112008241_112012562
ENSMUSG00000032503.19_112005163_112016762_1	chr9	-	823	8	ISM	ENSMUSG00000032503.19	ENSMUST00000161412.8	1687	10	29657	15157	66	3937	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCCAACGTAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	112016762	112005162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_112005304_112006001_112006062_112006725_112006805_112008095_112008241_112012562_112012653_112013336_112013379_112014676_112014838_112016657
ENSMUSG00000032503.19_112010411_112014726_1	chr9	-	1660	4	ISM	ENSMUSG00000032503.19	ENST00000396482.6	2383	6	2270	360	111	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGACTGACTCCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	112014726	112010410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_112011889_112012562_112012653_112013336_112013379_112014676
ENSMUSG00000032503.19_112010556_112016762_1	chr9	-	1731	5	FSM	ENSMUSG00000032503.19	ENSMUST00000178410.2	3419	5	232	1456	66	-505	multi-exon	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCAGCTTTCTGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	112016762	112010555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_112011889_112012562_112012653_112013336_112013379_112014676_112014838_112016657
ENSMUSG00000032503.19_112010680_112016762_1	chr9	-	1607	5	FSM	ENSMUSG00000032503.19	ENSMUST00000178410.2	3419	5	232	1580	66	-629	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATAGCACCCATTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	112016762	112010679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_112011889_112012562_112012653_112013336_112013379_112014676_112014838_112016657
ENSMUSG00000032503.19_112010808_112016976_1	chr9	-	1606	6	FSM	ENSMUSG00000032503.19	ENST00000396482.6	2383	6	20	757	18	-757	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCGGGAGAAGTAAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	112016976	112010807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_112011889_112012562_112012653_112013336_112013379_112014676_112014838_112016657_112016835_112016921
ENSMUSG00000032504.16_113483135_113485177_1	chr9	-	1134	2	ISM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	52135	-405	52135	405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAACCTGGAGAAAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	113485177	113483134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113484176_113485084
ENSMUSG00000032504.16_113483331_113486247_1	chr9	-	1130	3	ISM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	51065	-209	51065	209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTTTAATGTGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	113486247	113483330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113484176_113485084_113485276_113486153
ENSMUSG00000032504.16_113483540_113490095_1	chr9	-	1128	5	ISM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	47217	0	47217	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTGTTATGTTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	113490095	113483539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013
ENSMUSG00000032504.16_113483800_113491549_1	chr9	-	1134	6	ISM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	45763	260	45763	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGCTATAATAGCATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	113491549	113483799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336
ENSMUSG00000032504.16_113483975_113500959_1	chr9	-	1130	7	ISM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	36353	435	36353	-435	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCGACAGGACAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	113500959	113483974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824
ENSMUSG00000032504.16_113484098_113501882_1	chr9	-	1154	8	ISM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	35430	558	35430	-558	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAGAGCCCCGGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	113501882	113484097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770
ENSMUSG00000032504.16_113485112_113503480_1	chr9	-	1137	8	ISM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	33832	1572	33832	-1572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCCTACCTATCCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	113503480	113485111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392
ENSMUSG00000032504.16_113485152_113503558_1	chr9	-	1175	8	ISM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	33754	1612	33754	-1612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTCTGCTCCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	113503558	113485151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392
ENSMUSG00000032504.16_113486235_113509099_1	chr9	-	1185	9	ISM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	28213	2695	28213	-2695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTCCTCCAGCCTATCA	NA	NA	NA	NA	NA	NA	NA	NA	113509099	113486234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020
ENSMUSG00000032504.16_113491438_113516767_1	chr9	-	1147	8	ISM	ENSMUSG00000032504.16	ENSMUST00000035086.13	5951	18	20560	10626	20545	-7898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCTCTCTGTCACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	113516767	113491437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692
ENSMUSG00000032504.16_113500934_113520584_1	chr9	-	1134	9	ISM	ENSMUSG00000032504.16	ENSMUST00000035086.13	5951	18	16743	20122	16728	-17394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCTACCAGTCCCATCGAG	NA	NA	NA	NA	NA	NA	NA	NA	113520584	113500933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520
ENSMUSG00000032504.16_113503504_113537071_1	chr9	-	1144	10	ISM	ENSMUSG00000032504.16	ENSMUST00000035086.13	5951	18	256	22692	241	-19964	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTACCAAGTCTACATC	NA	NA	NA	NA	NA	NA	NA	NA	113537071	113503503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ENSMUSG00000032504.16_113503504_113537161_1	chr9	-	1249	10	ISM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	151	19964	151	-19964	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTACCAAGTCTACATC	NA	NA	NA	NA	NA	NA	NA	NA	113537161	113503503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113503571_113507373_113507498_113509020_113509244_113514374_113514507_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ENSMUSG00000032507.16_113806325_113808625_1	chr9	-	1784	2	ISM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	47204	550	47204	-550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGACTTCAGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	113808625	113806324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113808009_113808525
ENSMUSG00000032507.16_113806440_113808702_1	chr9	-	1746	2	ISM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	47127	665	47127	-665	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTTCTAAGTATGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	113808702	113806439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113808009_113808525
ENSMUSG00000032507.16_113806954_113818480_1	chr9	-	1740	8	ISM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	37349	1179	37349	-1179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCTGTCCCTGTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	113818480	113806953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377
ENSMUSG00000032507.16_113807205_113829660_1	chr9	-	1773	11	ISM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	26169	1430	26169	-1430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTATGTCCATCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	113829660	113807204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565
ENSMUSG00000032507.16_113807345_113832564_1	chr9	-	1763	13	ISM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	23265	1570	23265	-1570	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCACCTTTCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	113832564	113807344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509
ENSMUSG00000032507.16_113807453_113855797_1	chr9	-	1754	15	FSM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	32	1678	32	-1678	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCAGAATGGCTGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	113855797	113807452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113855760
ENSMUSG00000032508.9_119166419_119167252_1	chr9	-	431	3	ISM	ENSMUSG00000032508.9	ENST00000417037.8	874	4	1888	0	1780	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTGGGAGCCCTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	119167252	119166418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119166577_119166819_119166912_119167071
ENSMUSG00000032508.9_119166419_119168765_1	chr9	-	453	4	FSM	ENSMUSG00000032508.9	ENST00000651800.2	720	4	267	0	267	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTGGGAGCCCTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	119168765	119166418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_119166577_119166819_119166912_119167641_119167777_119168697
ENSMUSG00000032508.9_119166419_119168765_2	chr9	-	318	3	FSM	ENSMUSG00000032508.9	ENST00000650112.2	585	3	267	0	267	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTGGGAGCCCTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	119168765	119166418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_119166577_119166819_119166912_119168697
ENSMUSG00000032508.9_119166530_119168755_1	chr9	-	378	4	FSM	ENSMUSG00000032508.9	ENST00000417037.8	874	4	385	111	277	-111	multi-exon	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACTTTCCCAGTATCCT	NA	NA	NA	NA	NA	NA	NA	NA	119168755	119166529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_119166577_119166819_119166912_119167071_119167253_119168697
ENSMUSG00000032508.9_119166818_119168901_2	chr9	-	298	2	ISM	ENSMUSG00000032508.9	ENST00000650112.2	585	3	131	399	131	-399	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTAGGCCTGCTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	119168901	119166817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119166912_119168697
ENSMUSG00000032508.9_119167070_119168958_1	chr9	-	444	2	ISM	ENSMUSG00000032508.9	ENST00000417037.8	874	4	182	651	74	-651	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTAAACATCTAAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	119168958	119167069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119167253_119168697
ENSMUSG00000032508.9_119167070_119168958_2	chr9	-	579	3	ISM	ENSMUSG00000032508.9	ENST00000421516.3	926	5	74	651	74	-651	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTAAACATCTAAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	119168958	119167069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119167253_119167641_119167777_119168697
ENSMUSG00000032511.18_119314304_119346780_1	chr9	-	3371	11	NIC	ENSMUSG00000032511.18	novel	8287	27	NA	NA	44954	-7	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCGAGCAAAGAACATCTT	NA	NA	NA	NA	NA	NA	NA	NA	119346780	119314303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_-_119315885_119318814_119319086_119320526_119320632_119321114_119321253_119322126_119322181_119324572_119324855_119327146_119327270_119330687_119330862_119341206_119341362_119342046_119342168_119346413
ENSMUSG00000032511.18_119314648_119350343_1	chr9	-	3368	12	NIC	ENSMUSG00000032511.18	novel	8287	27	NA	NA	41391	-351	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACCTGGCCACCCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	119350343	119314647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_-_119315885_119318814_119319086_119320526_119320632_119321114_119321253_119322126_119322181_119324572_119324855_119327146_119327270_119330687_119330862_119341206_119341362_119342046_119342168_119346413_119346858_119350079
ENSMUSG00000032511.18_119324719_119379730_1	chr9	-	3394	18	ISM	ENSMUSG00000032511.18	ENST00000450102.6	6290	26	12004	10422	12004	-10422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAAGGGGACCTGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	119379730	119324718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119324855_119327146_119327270_119330687_119330862_119341206_119341362_119342046_119342168_119346413_119346858_119350079_119350437_119351543_119351718_119357977_119358217_119359022_119359156_119362728_119363101_119363620_119363801_119364878_119365077_119365505_119365648_119366687_119366752_119368589_119368821_119372389_119372482_119379671
ENSMUSG00000032511.18_119341250_119391602_1	chr9	-	3380	18	ISM	ENSMUSG00000032511.18	ENST00000450102.6	6290	26	132	26953	132	-26953	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCATCATCTTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	119391602	119341249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119341362_119342046_119342168_119346413_119346858_119350079_119350437_119351543_119351718_119357977_119358217_119359022_119359156_119362728_119363101_119363620_119363801_119364878_119365077_119365505_119365648_119366687_119366752_119368589_119368821_119372389_119372482_119379671_119379801_119381051_119381148_119389335_119389447_119391417
ENSMUSG00000032513.9_119754323_119761726_1	chr9	-	3553	7	ISM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	4905	0	4905	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAACTTGTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	119761726	119754322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686
ENSMUSG00000032513.9_119754446_119761781_1	chr9	-	3485	7	ISM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	4850	123	4850	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAAGAGCACAGCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	119761781	119754445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686
ENSMUSG00000032513.9_119754680_119766616_1	chr9	-	3534	9	FSM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	15	357	15	-357	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACTTCAGCATGGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	119766616	119754679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ENSMUSG00000032518.7_119956755_119961435_1	chr9	+	1932	7	NNC	ENSMUSG00000032518.7	novel	1938	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13066	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCATACTCACCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	119956754	119961435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960071_119960232_119960465
ENSMUSG00000032518.7_119956755_119961435_2	chr9	+	1931	7	NNC	ENSMUSG00000032518.7	novel	1938	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14021	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCATACTCACCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	119956754	119961435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_119956890_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ENSMUSG00000032518.7_119956755_119961435_3	chr9	+	1932	7	NNC	ENSMUSG00000032518.7	novel	1938	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCATACTCACCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	119956754	119961435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_119956897_119957522_119957683_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ENSMUSG00000032518.7_119956855_119961437_1	chr9	+	1834	7	NNC	ENSMUSG00000032518.7	novel	1938	7	NA	NA	-55	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATACTCACCAGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	119956854	119961437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_119956897_119957522_119957683_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ENSMUSG00000032518.7_119956855_119961437_2	chr9	+	1834	7	NNC	ENSMUSG00000032518.7	novel	1938	7	NA	NA	-55	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATACTCACCAGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	119956854	119961437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960071_119960232_119960465
ENSMUSG00000032518.7_119956855_119961437_3	chr9	+	1833	7	NNC	ENSMUSG00000032518.7	novel	1938	7	NA	NA	-55	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATACTCACCAGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	119956854	119961437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_119956890_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ENSMUSG00000032518.7_119956910_119960114_1	chr9	+	1322	5	ISM	ENSMUSG00000032518.7	ENSMUST00000217317.2	1599	6	0	511	0	-511	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCAGGGTGAATGGACC	NA	NA	NA	NA	NA	NA	NA	NA	119956909	119960114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065
ENSMUSG00000032518.7_119956910_119960167_1	chr9	+	1375	5	ISM	ENSMUSG00000032518.7	ENSMUST00000217317.2	1599	6	0	458	0	-458	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGCCGACTGGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	119956909	119960167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065
ENSMUSG00000032518.7_119957029_119960223_1	chr9	+	1312	5	ISM	ENSMUSG00000032518.7	ENSMUST00000217317.2	1599	6	119	402	119	-402	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACGGGTGCGTATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	119957028	119960223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065
ENSMUSG00000032519.12_119939471_119953384_1	chr9	+	1574	7	FSM	ENSMUSG00000032519.12	ENSMUST00000035106.12	1791	7	31	186	31	-186	multi-exon	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAGACATCACCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	119939470	119953384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_119939639_119945567_119945690_119946518_119946604_119949322_119949503_119949738_119949914_119951159_119951327_119952707
ENSMUSG00000032519.12_119939490_119953418_1	chr9	+	1589	7	FSM	ENSMUSG00000032519.12	ENSMUST00000035106.12	1791	7	50	152	50	-152	multi-exon	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACAGAACCAAAACAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	119939489	119953418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_119939639_119945567_119945690_119946518_119946604_119949322_119949503_119949738_119949914_119951159_119951327_119952707
ENSMUSG00000032519.12_119939490_119953570_1	chr9	+	1741	7	FSM	ENSMUSG00000032519.12	ENSMUST00000035106.12	1791	7	50	0	50	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGCACTCTGATTGACA	NA	NA	NA	NA	NA	NA	NA	NA	119939489	119953570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_119939639_119945567_119945690_119946518_119946604_119949322_119949503_119949738_119949914_119951159_119951327_119952707
ENSMUSG00000032519.12_119946531_119952840_1	chr9	+	723	5	FSM	ENSMUSG00000032519.12	ENST00000643672.1	731	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCCTGCCATGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	119946530	119952840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_119946604_119949322_119949503_119949738_119949914_119951164_119951327_119952707
ENSMUSG00000032519.12_119946531_119952840_2	chr9	+	722	5	NNC	ENSMUSG00000032519.12	novel	731	5	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCCTGCCATGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	119946530	119952840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_119946604_119949322_119949503_119949738_119949914_119951165_119951327_119952707
ENSMUSG00000032519.12_119946531_119952840_3	chr9	+	716	5	NNC	ENSMUSG00000032519.12	novel	731	5	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCCTGCCATGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	119946530	119952840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_119946597_119949322_119949503_119949738_119949914_119951164_119951327_119952707
ENSMUSG00000032519.12_119949323_119952840_1	chr9	+	648	4	NNC	ENSMUSG00000032519.12	novel	731	5	NA	NA	2800	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCCTGCCATGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	119949322	119952840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_119949503_119949740_119949914_119951164_119951327_119952707
ENSMUSG00000032526.12_121539395_121541987_1	chr9	+	572	3	NNC	ENSMUSG00000032526.12	novel	577	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCCCATGTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	121539394	121541987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_121539538_121539704_121539777_121541630
ENSMUSG00000032527.14_100864740_100912298_1	chr9	-	1146	11	ISM	ENSMUSG00000032527.14	ENST00000490504.5	1457	13	4616	0	4616	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGATGGAAGGGACTAG	NA	NA	NA	NA	NA	NA	NA	NA	100912298	100864739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100912227
ENSMUSG00000032527.14_100864740_100916905_1	chr9	-	1690	15	FSM	ENSMUSG00000032527.14	ENST00000466072.5	1699	15	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGATGGAAGGGACTAG	NA	NA	NA	NA	NA	NA	NA	NA	100916905	100864739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100868011_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
ENSMUSG00000032527.14_100864848_100913932_1	chr9	-	1060	12	ISM	ENSMUSG00000032527.14	ENST00000490504.5	1457	13	2982	108	2982	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCATCCAGCCATCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	100913932	100864847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100912227_100912297_100913908
ENSMUSG00000032527.14_100866426_100914028_1	chr9	-	1144	11	ISM	ENSMUSG00000032527.14	ENST00000490504.5	1457	13	2886	1686	2886	-1686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCAGGGGTTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	100914028	100866425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100912227_100912297_100913908
ENSMUSG00000032527.14_100867232_100916773_1	chr9	-	1045	11	ISM	ENSMUSG00000032527.14	ENST00000490504.5	1457	13	141	2492	141	-2492	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACCAACTATGCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	100916773	100867231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100912227_100912297_100913908_100914029_100916721
ENSMUSG00000032527.14_100867583_100916905_1	chr9	-	1130	10	ISM	ENSMUSG00000032527.14	ENST00000490504.5	1457	13	9	2843	9	-2843	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGACCTCCCCTCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	100916905	100867582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100912227_100912297_100913908_100914029_100916721
ENSMUSG00000032527.14_100869922_100912250_1	chr9	-	596	7	ISM	ENSMUSG00000032527.14	ENST00000483687.5	1571	14	4664	5182	4664	-5182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTACGCAAAAAATATTGT	NA	NA	NA	NA	NA	NA	NA	NA	100912250	100869921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100912227
ENSMUSG00000032527.14_100877615_100916768_1	chr9	-	689	7	ISM	ENSMUSG00000032527.14	ENST00000483687.5	1571	14	146	12875	146	-12875	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGGTGGTAGTGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	100916768	100877614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100912227_100912297_100913908_100914029_100916721
ENSMUSG00000032527.14_100881261_100916903_1	chr9	-	662	6	ISM	ENSMUSG00000032527.14	ENST00000483687.5	1571	14	11	16521	11	-16521	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGCAGCTGGGTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	100916903	100881260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_100881327_100894757_100894869_100905188_100905303_100912227_100912297_100913908_100914029_100916721
ENSMUSG00000032528.6_121487133_121498639_1	chr9	+	918	9	NNC	ENSMUSG00000032528.6	novel	944	9	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGCCAGGCCCCTTCGCA	NA	NA	NA	NA	NA	NA	NA	NA	121487132	121498639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_121487221_121489232_121489340_121493589_121493724_121494213_121494275_121494517_121494588_121494874_121494967_121497499_121497630_121497824_121497867_121498445
ENSMUSG00000032528.6_121487133_121498639_2	chr9	+	921	9	NNC	ENSMUSG00000032528.6	novel	944	9	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGCCAGGCCCCTTCGCA	NA	NA	NA	NA	NA	NA	NA	NA	121487132	121498639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_121487221_121489232_121489340_121493589_121493724_121494216_121494275_121494517_121494588_121494874_121494967_121497499_121497630_121497824_121497867_121498439
ENSMUSG00000032528.6_121487133_121498639_3	chr9	+	919	9	NNC	ENSMUSG00000032528.6	novel	944	9	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGCCAGGCCCCTTCGCA	NA	NA	NA	NA	NA	NA	NA	NA	121487132	121498639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_121487221_121489232_121489340_121493594_121493724_121494213_121494275_121494517_121494588_121494874_121494967_121497499_121497630_121497824_121497867_121498439
ENSMUSG00000032528.6_121487133_121498639_4	chr9	+	924	9	FSM	ENSMUSG00000032528.6	ENST00000438259.6	944	9	21	-1	21	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGCCAGGCCCCTTCGCA	NA	NA	NA	NA	NA	NA	NA	NA	121487132	121498639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_121487221_121489232_121489340_121493589_121493724_121494213_121494275_121494517_121494588_121494874_121494967_121497499_121497630_121497824_121497867_121498439
ENSMUSG00000032528.6_121487133_121498639_5	chr9	+	921	9	NNC	ENSMUSG00000032528.6	novel	944	9	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGCCAGGCCCCTTCGCA	NA	NA	NA	NA	NA	NA	NA	NA	121487132	121498639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_121487221_121489232_121489340_121493589_121493724_121494213_121494275_121494517_121494588_121494874_121494967_121497502_121497630_121497824_121497867_121498439
ENSMUSG00000032528.6_121490495_121498575_1	chr9	+	785	8	ISM	ENSMUSG00000032528.6	ENST00000433647.5	1308	12	7632	63	3383	-63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCCGAGCGCGCGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	121490494	121498575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_121490595_121493589_121493744_121494213_121494275_121494517_121494588_121494874_121494967_121497499_121497630_121497824_121497867_121498439
ENSMUSG00000032531.16_102594971_102600943_1	chr9	+	1103	3	ISM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	104	9674	104	-9669	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCACCTGGCCCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	102594970	102600943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_102595102_102597279_102598076_102600767
ENSMUSG00000032531.16_102595028_102601003_1	chr9	+	1106	3	ISM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	161	9614	161	-9609	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGCGATTGCAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	102595027	102601003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_102595102_102597279_102598076_102600767
ENSMUSG00000032531.16_102597349_102601991_1	chr9	+	1128	3	ISM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	2482	8626	2482	-8621	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAGACGGTTGCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	102597348	102601991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_102598076_102600767_102601063_102601885
ENSMUSG00000032531.16_102597648_102605702_1	chr9	+	1148	5	ISM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	2781	4915	2781	-4910	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAGGCACTGGGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	102597647	102605702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515
ENSMUSG00000032531.16_102601907_102608089_1	chr9	+	1131	6	ISM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	7040	2528	7040	-2523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAACACCTCTGCCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	102601906	102608089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991
ENSMUSG00000032532.8_121323505_121324705_1	chr9	-	136	2	ISM	ENSMUSG00000032532.8	ENSMUST00000216138.2	799	4	0	4615	0	-4496	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGAGCAGCGGGCGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	121324705	121323504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_121323599_121324663
ENSMUSG00000032534.19_102461787_102473346_1	chr9	-	2538	3	ISM	ENSMUSG00000032534.19	ENSMUST00000162655.9	4180	13	30387	0	23619	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTCTGTTGTCTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	102473346	102461786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_102464212_102471706_102471794_102473320
ENSMUSG00000032534.19_102461931_102473399_1	chr9	-	2447	3	ISM	ENSMUSG00000032534.19	ENSMUST00000162655.9	4180	13	30334	144	23566	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTCTCCCAAGCTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	102473399	102461930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_102464212_102471706_102471794_102473320
ENSMUSG00000032534.19_102462340_102479657_1	chr9	-	2451	6	ISM	ENSMUSG00000032534.19	ENSMUST00000162655.9	4180	13	24076	553	17308	-553	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCACATACTGCCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	102479657	102462339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616
ENSMUSG00000032534.19_102462388_102479716_1	chr9	-	2462	6	ISM	ENSMUSG00000032534.19	ENSMUST00000162655.9	4180	13	24017	601	17249	-601	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGCCCGTCTAGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	102479716	102462387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616
ENSMUSG00000032534.19_102462638_102480250_1	chr9	-	2453	7	ISM	ENSMUSG00000032534.19	ENSMUST00000162655.9	4180	13	23483	851	16715	-851	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAATGCAATGTTACTGC	NA	NA	NA	NA	NA	NA	NA	NA	102480250	102462637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040
ENSMUSG00000032534.19_102462867_102490583_1	chr9	-	2452	9	ISM	ENSMUSG00000032534.19	ENSMUST00000216281.2	1791	15	12597	-1186	6382	910	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAATGAAATCTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	102490583	102462866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493
ENSMUSG00000032534.19_102463221_102496947_1	chr9	-	2462	12	ISM	ENSMUSG00000032534.19	ENSMUST00000216281.2	1791	15	6233	-832	18	556	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGAAATAGGTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	102496947	102463220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890
ENSMUSG00000032534.19_102463447_102503708_1	chr9	-	2495	13	FSM	ENSMUSG00000032534.19	ENSMUST00000162655.9	4180	13	25	1660	25	330	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGCTGAGGCGCATAGG	NA	NA	NA	NA	NA	NA	NA	NA	102503708	102463446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102503461
ENSMUSG00000032534.19_102465920_102492495_1	chr9	-	1635	11	ISM	ENSMUSG00000032534.19	ENST00000683190.1	1971	13	4470	13	4470	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATCTTCGGTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	102492495	102465919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_102466187_102467526_102467733_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473
ENSMUSG00000032534.19_102466043_102496060_1	chr9	-	1637	12	ISM	ENSMUSG00000032534.19	ENST00000683190.1	1971	13	905	136	905	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCCACCGTCTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	102496060	102466042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_102466187_102467526_102467733_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009
ENSMUSG00000032534.19_102466108_102496107_1	chr9	-	1619	12	ISM	ENSMUSG00000032534.19	ENST00000683190.1	1971	13	858	201	858	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTGGATAGCATAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	102496107	102466107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_102466187_102467526_102467733_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009
ENSMUSG00000032534.19_102466170_102496158_1	chr9	-	1608	12	ISM	ENSMUSG00000032534.19	ENST00000683190.1	1971	13	807	263	807	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGACATGACGGAATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	102496158	102466169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_102466187_102467526_102467733_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009
ENSMUSG00000032534.19_102467598_102496934_1	chr9	-	1593	12	ISM	ENSMUSG00000032534.19	ENSMUST00000093791.10	2696	17	6389	3821	31	-1691	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATGGCGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	102496934	102467597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_102467733_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890
ENSMUSG00000032536.13_121232544_121283502_1	chr9	+	1620	12	FSM	ENSMUSG00000032536.13	ENST00000449246.5	1971	12	41	310	41	-310	multi-exon	TRUE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGGGGAGCTGCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	121232543	121283502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_121232871_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344
ENSMUSG00000032536.13_121232544_121283584_1	chr9	+	1702	12	FSM	ENSMUSG00000032536.13	ENST00000449246.5	1971	12	41	228	41	-228	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGGCTTCTCTGGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	121232543	121283584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_121232871_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344
ENSMUSG00000032536.13_121232779_121283728_1	chr9	+	1611	12	FSM	ENSMUSG00000032536.13	ENST00000449246.5	1971	12	276	84	276	-84	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAAAGCCAGCCACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	121232778	121283728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_121232871_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344
ENSMUSG00000032540.17_122180810_122208647_1	chr9	+	885	6	NNC	ENSMUSG00000032540.17	novel	1185	6	NA	NA	13	-228	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCCACACAGTAGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	122180809	122208647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_122180905_122194200_122194287_122196953_122197327_122204976_122205126_122206923_122207036_122208577
ENSMUSG00000032540.17_122180810_122208714_1	chr9	+	958	6	FSM	ENSMUSG00000032540.17	ENST00000458276.7	1185	6	66	161	13	-161	multi-exon	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCACAGCCCGAGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	122180809	122208714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122208577
ENSMUSG00000032540.17_122194200_122208890_1	chr9	+	1040	5	ISM	ENSMUSG00000032540.17	ENST00000458276.7	1185	6	13456	-15	13403	15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATTGTGATTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	122194199	122208890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122208577
ENSMUSG00000032540.17_122194208_122207996_1	chr9	+	829	5	ISM	ENSMUSG00000032540.17	ENST00000644371.2	2245	8	13411	1848	13411	-879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCCGATCCTGCATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	122194207	122207996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886
ENSMUSG00000032540.17_122197028_122208890_1	chr9	+	879	4	ISM	ENSMUSG00000032540.17	ENST00000458276.7	1185	6	16284	-15	16231	15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATTGTGATTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	122197027	122208890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_122197327_122204970_122205126_122206923_122207036_122208577
ENSMUSG00000032540.17_122197242_122208890_1	chr9	+	852	5	ISM	ENSMUSG00000032540.17	ENST00000644371.2	2245	8	16445	954	16445	15	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATTGTGATTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	122197241	122208890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
ENSMUSG00000032540.17_122205074_122209062_1	chr9	+	793	5	ISM	ENSMUSG00000032540.17	ENST00000644371.2	2245	8	24277	782	24277	187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCACTTTATTTTCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	122205073	122209062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_122205126_122206923_122207036_122207886_122208074_122208577_122208964_122209006
ENSMUSG00000032540.17_122207930_122209257_1	chr9	+	781	3	ISM	ENSMUSG00000032540.17	ENST00000644371.2	2245	8	27133	587	27133	382	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTTTTCCTGTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	122207929	122209257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_122208074_122208577_122208964_122209006
ENSMUSG00000032540.17_122207997_122209327_1	chr9	+	784	3	ISM	ENSMUSG00000032540.17	ENST00000644371.2	2245	8	27200	517	27200	452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGCAACGCAGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	122207996	122209327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_122208074_122208577_122208964_122209006
ENSMUSG00000032540.17_122208635_122209454_1	chr9	+	777	2	ISM	ENSMUSG00000032540.17	ENST00000644371.2	2245	8	27838	390	27838	-390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCCAGGACCCAGGATC	NA	NA	NA	NA	NA	NA	NA	NA	122208634	122209454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_122208964_122209006
ENSMUSG00000032540.17_122208785_122209645_1	chr9	+	818	2	ISM	ENSMUSG00000032540.17	ENST00000644371.2	2245	8	27988	199	27988	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGGTTATTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	122208784	122209645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_122208964_122209006
ENSMUSG00000032540.17_122208847_122209688_1	chr9	+	799	2	ISM	ENSMUSG00000032540.17	ENST00000644371.2	2245	8	28050	156	28050	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATACTTGAAGTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	122208846	122209688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_122208964_122209006
ENSMUSG00000032547.13_102712181_102784741_1	chr9	+	2440	15	FSM	ENSMUSG00000032547.13	ENSMUST00000175883.8	2505	15	65	0	10	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCCCCCGCATGGAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	102712180	102784741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763192_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ENSMUSG00000032547.13_102712334_102784741_1	chr9	+	2287	15	FSM	ENSMUSG00000032547.13	ENSMUST00000175883.8	2505	15	218	0	163	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCCCCCGCATGGAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	102712333	102784741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763192_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ENSMUSG00000032551.8_122774715_122778015_1	chr9	-	2485	2	ISM	ENSMUSG00000032551.8	ENSMUST00000035154.4	3361	3	2050	561	2003	-561	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGTATCTATGGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	122778015	122774714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_122777174_122777989
ENSMUSG00000032551.8_122774854_122780018_1	chr9	-	2614	3	FSM	ENSMUSG00000032551.8	ENSMUST00000035154.4	3361	3	47	700	0	-700	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGACATTCGGGAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	122780018	122774853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_122777174_122777989_122778135_122779869
ENSMUSG00000032553.15_103066729_103069548_1	chr9	-	1084	3	ISM	ENSMUSG00000032553.15	ENSMUST00000035157.10	3064	7	9788	1498	9788	-1498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGTGACCATCCCACACCA	NA	NA	NA	NA	NA	NA	NA	NA	103069548	103066728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_103067621_103068267_103068323_103069411
ENSMUSG00000032553.15_103067075_103079152_1	chr9	-	1036	7	FSM	ENSMUSG00000032553.15	ENSMUST00000035157.10	3064	7	184	1844	184	-1844	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGCTTGTGGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	103079152	103067074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ENSMUSG00000032553.15_103067134_103079201_1	chr9	-	1026	7	FSM	ENSMUSG00000032553.15	ENSMUST00000035157.10	3064	7	135	1903	135	-1903	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCATCTGAGAAGTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	103079201	103067133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ENSMUSG00000032553.15_103067196_103079328_1	chr9	-	1091	7	FSM	ENSMUSG00000032553.15	ENSMUST00000035157.10	3064	7	8	1965	8	-1965	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGGTGTAGCATCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	103079328	103067195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ENSMUSG00000032557.14_103924620_103926454_1	chr9	-	288	2	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	13879	822	13879	-822	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGAGAAGGGGTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	103926454	103924619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_103924886_103926432
ENSMUSG00000032557.14_103924684_103926498_1	chr9	-	268	2	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	13835	886	13835	-886	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTGTGGAACTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	103926498	103924683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_103924886_103926432
ENSMUSG00000032557.14_103924849_103926807_1	chr9	-	230	3	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	13526	1051	13526	-1051	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGCGAAAGCTTGGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	103926807	103924848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_103924886_103926432_103926540_103926721
ENSMUSG00000032557.14_103926525_103931324_1	chr9	-	293	4	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	9009	2727	9009	-2727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGGTTTCAGAAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	103931324	103926524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_103926540_103926721_103926801_103927033_103927170_103931261
ENSMUSG00000032557.14_103931340_103933034_1	chr9	-	273	4	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	7299	7542	7299	-7542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGAAGGCGTCTGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	103933034	103931339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_103931390_103931552_103931658_103932388_103932474_103933001
ENSMUSG00000032557.14_103931610_103934118_1	chr9	-	266	4	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	6215	7812	6215	-7812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTTTCCGGGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	103934118	103931609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_103931658_103932388_103932474_103933001_103933089_103934072
ENSMUSG00000032557.14_103933002_103937506_1	chr9	-	287	3	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	2827	9204	2827	-9204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAACGTATGAATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	103937506	103933001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_103933089_103934072_103934183_103937416
ENSMUSG00000032557.14_103937610_103940262_1	chr9	-	301	2	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	71	13812	71	-13812	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCAGTGACTATAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	103940262	103937609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_103937639_103939990
ENSMUSG00000032562.14_107491525_107492885_1	chr9	-	848	2	ISM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	19681	201	19626	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCTGGCTCCATTAACC	NA	NA	NA	NA	NA	NA	NA	NA	107492885	107491524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107492298_107492810
ENSMUSG00000032562.14_107491619_107492970_1	chr9	-	839	2	ISM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	19596	295	19541	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCGGCCCCCTGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	107492970	107491618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107492298_107492810
ENSMUSG00000032562.14_107491671_107493021_1	chr9	-	838	2	ISM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	19545	347	19490	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCGATTCCGTGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	107493021	107491670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107492298_107492810
ENSMUSG00000032562.14_107491852_107493742_1	chr9	-	944	4	ISM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	18824	528	18769	-528	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGATACCGCCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	107493742	107491851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107492298_107492810_107493025_107493353_107493508_107493612
ENSMUSG00000032562.14_107492139_107497056_1	chr9	-	947	6	ISM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	15510	815	15455	-815	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCTCCCAGTCTAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	107497056	107492138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107492298_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895
ENSMUSG00000032562.14_107492855_107497387_1	chr9	-	886	6	ISM	ENSMUSG00000032562.14	ENSMUST00000192615.6	1777	9	15124	1531	15124	-1531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGTGGCCTCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	107497387	107492854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245
ENSMUSG00000032562.14_107492987_107512367_1	chr9	-	866	8	ISM	ENSMUSG00000032562.14	ENSMUST00000192615.6	1777	9	144	1663	144	-1663	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGTTTGAGGATCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	107512367	107492986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ENSMUSG00000032562.14_107493424_107512511_1	chr9	-	902	7	ISM	ENSMUSG00000032562.14	ENSMUST00000192615.6	1777	9	0	2100	0	-2100	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGAAGGACCTGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	107512511	107493423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ENSMUSG00000032563.17_104930496_104954912_1	chr9	+	1739	10	FSM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	58	2175	58	1241	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTTCTCAGAACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	104930495	104954912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
ENSMUSG00000032563.17_104930610_104955032_1	chr9	+	1745	10	FSM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	172	2055	172	1361	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGGTGCAGGTTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	104930609	104955032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
ENSMUSG00000032563.17_104932791_104955271_1	chr9	+	1700	8	ISM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	2353	1816	2353	1600	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCCGTCACCTTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	104932790	104955271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
ENSMUSG00000032563.17_104934264_104955440_1	chr9	+	1734	7	ISM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	3826	1647	3826	-1647	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAGATGTCAGTAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	104934263	104955440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
ENSMUSG00000032563.17_104948616_104955704_1	chr9	+	1737	4	ISM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	18178	1383	18178	-1383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGCACAGAGGGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	104948615	104955704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_104948684_104950973_104951052_104952360_104952439_104954191
ENSMUSG00000032563.17_104948648_104955780_1	chr9	+	1781	4	ISM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	18210	1307	18210	-1307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCACAGTGAGAGCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	104948647	104955780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_104948684_104950973_104951052_104952360_104952439_104954191
ENSMUSG00000032563.17_104952411_104955936_1	chr9	+	1773	2	ISM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	21973	1151	21973	-1151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGCAATCCTAACACAT	NA	NA	NA	NA	NA	NA	NA	NA	104952410	104955936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_104952439_104954191
ENSMUSG00000032564.17_104444020_104447177_1	chr9	+	793	2	ISM	ENSMUSG00000032564.17	ENST00000512055.5	4303	17	46	464567	46	-303092	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCTCTTTACAACTACAT	NA	NA	NA	NA	NA	NA	NA	NA	104444019	104447177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_104444100_104446464
ENSMUSG00000032564.17_104446568_104563665_1	chr9	+	775	2	ISM	ENSMUSG00000032564.17	ENSMUST00000057742.15	3959	16	-114	348078	-114	-186604	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGAATCTTTAACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	104446567	104563665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_104447301_104563623
ENSMUSG00000032564.17_104446835_104750021_1	chr9	+	791	3	ISM	ENSMUSG00000032564.17	ENSMUST00000077190.7	3409	13	-151	161722	-151	-248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCCTTGGTGGCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	104446834	104750021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_104447301_104563623_104563805_104749877
ENSMUSG00000032564.17_104447245_104866836_1	chr9	+	804	8	ISM	ENSMUSG00000032564.17	ENSMUST00000057742.15	3959	16	563	44907	259	-44907	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGATGAGAGGAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	104447244	104866836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_104447301_104563623_104563805_104749877_104750058_104777416_104777489_104778642_104778718_104799691_104799776_104802948_104803039_104866770
ENSMUSG00000032564.17_104749878_104884761_1	chr9	+	776	9	ISM	ENSMUSG00000032564.17	ENSMUST00000057742.15	3959	16	303196	26982	302892	-26982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCCCAGAAACAGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	104749877	104884761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_104750058_104777416_104777489_104778642_104778718_104799691_104799776_104802948_104803039_104866770_104866870_104870326_104870414_104871026_104871087_104884732
ENSMUSG00000032564.17_104749878_104884815_1	chr9	+	830	9	ISM	ENSMUSG00000032564.17	ENSMUST00000057742.15	3959	16	303196	26928	302892	-26928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTAAAGGCCTTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	104749877	104884815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_104750058_104777416_104777489_104778642_104778718_104799691_104799776_104802948_104803039_104866770_104866870_104870326_104870414_104871026_104871087_104884732
ENSMUSG00000032564.17_104777459_104897016_1	chr9	+	766	10	ISM	ENSMUSG00000032564.17	ENSMUST00000057742.15	3959	16	330777	14727	330473	-14727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCATAAGTGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	104777458	104897016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_104777489_104778642_104778718_104799691_104799776_104802948_104803039_104866770_104866870_104870326_104870414_104871026_104871087_104884732_104884867_104895673_104895729_104896964
ENSMUSG00000032564.17_104866769_104904138_1	chr9	+	860	8	ISM	ENSMUSG00000032564.17	ENSMUST00000057742.15	3959	16	420087	7605	419783	-7605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCATAGATATCACGGG	NA	NA	NA	NA	NA	NA	NA	NA	104866768	104904138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_104866870_104870326_104870414_104871026_104871087_104884732_104884867_104895673_104895729_104896964_104897017_104899486_104899621_104903901
ENSMUSG00000032564.17_104871056_104910085_1	chr9	+	785	7	ISM	ENSMUSG00000032564.17	ENSMUST00000057742.15	3959	16	424374	1658	424070	-1658	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACAGAATTCTGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	104871055	104910085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_104871087_104884732_104884867_104895673_104895729_104896964_104897017_104899486_104899621_104903901_104904139_104909943
ENSMUSG00000032564.17_104899531_104910398_1	chr9	+	782	3	ISM	ENSMUSG00000032564.17	ENSMUST00000077190.7	3409	13	452545	1345	452545	-1345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTTACACTGTAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	104899530	104910398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_104899621_104903901_104904139_104909943
ENSMUSG00000032564.17_104904009_104910612_1	chr9	+	799	2	ISM	ENSMUSG00000032564.17	ENSMUST00000077190.7	3409	13	457023	1131	457023	-1131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAATAAATTTATGTACC	NA	NA	NA	NA	NA	NA	NA	NA	104904008	104910612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_104904139_104909943
ENSMUSG00000032564.17_104904056_104910690_1	chr9	+	830	2	ISM	ENSMUSG00000032564.17	ENSMUST00000077190.7	3409	13	457070	1053	457070	-1053	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCCCATTGACACAAATT	NA	NA	NA	NA	NA	NA	NA	NA	104904055	104910690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_104904139_104909943
ENSMUSG00000032570.18_105280595_105300310_1	chr9	-	1024	8	ISM	ENSMUSG00000032570.18	ENST00000507488.6	2944	26	47038	34	47037	-34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGATAATGCAACCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	105300310	105280594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_105280783_105290293_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141
ENSMUSG00000032570.18_105280595_105312407_1	chr9	-	1529	12	ISM	ENSMUSG00000032570.18	ENST00000359644.7	3104	27	59338	34	34940	-34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGATAATGCAACCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	105312407	105280594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_105280783_105290263_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250
ENSMUSG00000032570.18_105280595_105320240_1	chr9	-	1695	14	ISM	ENSMUSG00000032570.18	ENSMUST00000177074.8	2664	27	51379	-150	27107	-34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGATAATGCAACCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	105320240	105280594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_105280783_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144
ENSMUSG00000032570.18_105280738_105316644_1	chr9	-	1491	13	ISM	ENSMUSG00000032570.18	ENST00000359644.7	3104	27	55101	177	30703	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCATCTGGAGACAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	105316644	105280737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_105280783_105290263_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539
ENSMUSG00000032570.18_105280738_105322514_1	chr9	-	1650	15	ISM	ENSMUSG00000032570.18	ENSMUST00000177074.8	2664	27	49105	-7	24833	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCATCTGGAGACAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	105322514	105280737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_105280783_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416
ENSMUSG00000032570.18_105288557_105330042_1	chr9	-	3774	19	ISM	ENSMUSG00000032570.18	ENST00000504948.5	3993	25	17305	-465	17305	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTCCCAGTTAGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	105330042	105288556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973
ENSMUSG00000032570.18_105289089_105323328_1	chr9	-	2983	16	ISM	ENSMUSG00000032570.18	ENST00000504948.5	3993	25	24019	67	24019	-67	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTATGCTTGGGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	105323328	105289088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250
ENSMUSG00000032570.18_105289160_105344980_1	chr9	-	3702	25	ISM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	27352	603	2367	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGACCTAGATTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	105344980	105289159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899
ENSMUSG00000032570.18_105289249_105329078_1	chr9	-	3013	18	ISM	ENSMUSG00000032570.18	ENST00000504948.5	3993	25	18269	227	18269	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCCAAACTCAGAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	105329078	105289248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002
ENSMUSG00000032570.18_105289348_105371661_1	chr9	-	3709	27	ISM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	671	791	-42	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTCAGCTGAATAATTG	NA	NA	NA	NA	NA	NA	NA	NA	105371661	105289347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613
ENSMUSG00000032570.18_105289407_105371697_1	chr9	-	3686	27	ISM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	635	850	48	-385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTAGTTTAATACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	105371697	105289406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613
ENSMUSG00000032570.18_105289463_105371863_1	chr9	-	3796	27	ISM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	469	906	-29	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATAGAGTCAAAAACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	105371863	105289462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613
ENSMUSG00000032570.18_105289616_105372246_1	chr9	-	3731	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	86	1059	30	-594	multi-exon	FALSE	canonical	NA	NA	NA	NA	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGCTCTTCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	105372246	105289615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ENSMUSG00000032570.18_105289673_105372276_1	chr9	-	3704	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	56	1116	0	-651	multi-exon	FALSE	canonical	NA	NA	NA	NA	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCACTGTTCTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	105372276	105289672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ENSMUSG00000032570.18_105289747_105372332_1	chr9	-	3686	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	0	1190	0	-725	multi-exon	FALSE	canonical	NA	NA	NA	NA	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATACCTTGTGCTACCAT	NA	NA	NA	NA	NA	NA	NA	NA	105372332	105289746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ENSMUSG00000032570.18_105289816_105344931_1	chr9	-	3002	24	ISM	ENSMUSG00000032570.18	ENST00000504948.5	3993	25	2416	794	2416	-794	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTTAGAAATTGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	105344931	105289815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105343740_105343872_105344899
ENSMUSG00000032570.18_105289873_105344980_1	chr9	-	2994	24	ISM	ENSMUSG00000032570.18	ENST00000504948.5	3993	25	2367	851	2367	-851	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGGGGCTTTCTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	105344980	105289872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105343740_105343872_105344899
ENSMUSG00000032570.18_105289949_105345018_1	chr9	-	2956	24	ISM	ENSMUSG00000032570.18	ENST00000504948.5	3993	25	2329	927	2329	-927	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATGTACAAATACACTG	NA	NA	NA	NA	NA	NA	NA	NA	105345018	105289948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105343740_105343872_105344899
ENSMUSG00000032570.18_105290122_105371682_1	chr9	-	2961	26	ISM	ENSMUSG00000032570.18	ENST00000508532.5	4333	27	641	1100	63	-1100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTTGATTTGAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	105371682	105290121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105343740_105343872_105344899_105345017_105347235_105347347_105371613
ENSMUSG00000032570.18_105290262_105372246_1	chr9	-	3016	27	FSM	ENSMUSG00000032570.18	ENST00000508532.5	4333	27	77	1240	30	-1240	multi-exon	FALSE	canonical	NA	NA	NA	NA	2125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGCATATTGCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	105372246	105290261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105343740_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372050
ENSMUSG00000032570.18_105312380_105371863_1	chr9	-	1687	16	ISM	ENSMUSG00000032570.18	ENST00000508532.5	4333	27	460	23358	-29	-12413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTATGAGCAGGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	105371863	105312379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105343740_105343872_105344899_105345017_105347235_105347347_105371613
ENSMUSG00000032575.17_106765287_106767502_1	chr9	-	1281	2	ISM	ENSMUSG00000032575.17	ENSMUST00000069036.14	960	3	1112	-665	1112	665	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCAGGGCCTTACATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	106767502	106765286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106766425_106767359
ENSMUSG00000032575.17_106765509_106769114_1	chr9	-	1288	4	FSM	ENSMUSG00000032575.17	ENSMUST00000159283.8	2247	4	64	895	64	443	multi-exon	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGTGTGAGCTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	106769114	106765508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_106766425_106767359_106767502_106768269_106768398_106769012
ENSMUSG00000032579.15_107204682_107206543_1	chr9	-	821	4	ISM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	9006	399	8988	-399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAATGCCTACATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	107206543	107204681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522
ENSMUSG00000032579.15_107204741_107206651_1	chr9	-	870	4	ISM	ENSMUSG00000032579.15	ENSMUST00000118051.2	453	5	8880	-449	8880	449	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTAGGGCCTGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	107206651	107204740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522
ENSMUSG00000032579.15_107205190_107213862_1	chr9	-	837	9	ISM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	1687	907	1669	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTTACCCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	107213862	107205189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770
ENSMUSG00000032579.15_107205454_107214374_1	chr9	-	851	9	ISM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	1175	1171	1157	-264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTCAGCAGTTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	107214374	107205453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199
ENSMUSG00000032579.15_107208289_107215500_1	chr9	-	786	6	ISM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	49	4006	31	-3099	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACGGGCTGGACCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	107215500	107208288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107215479
ENSMUSG00000032580.13_107621468_107631289_1	chr9	-	1147	12	ISM	ENSMUSG00000032580.13	ENST00000347869.8	3095	25	16909	3791	16897	-3769	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATGGCCTGCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	107631289	107621467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220
ENSMUSG00000032580.13_107627699_107642799_1	chr9	-	1008	12	ISM	ENSMUSG00000032580.13	ENSMUST00000035199.13	3064	25	5387	10000	5387	-10000	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTATAATCAGACCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	107642799	107627698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693
ENSMUSG00000032580.13_107628917_107644796_1	chr9	-	1065	12	ISM	ENSMUSG00000032580.13	ENSMUST00000035199.13	3064	25	3390	11218	3390	-11218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCAGCATCATCTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	107644796	107628916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741
ENSMUSG00000032582.15_107651848_107659962_1	chr9	-	400	4	ISM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	90058	1086	90058	-1086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGAAAGGGGCGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	107659962	107651847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107651921_107655128_107655227_107656772_107656848_107659808
ENSMUSG00000032582.15_107659953_107665030_1	chr9	-	407	4	ISM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	84990	9191	84990	-9191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTCGCGAGGAAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	107665030	107659952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107660064_107660888_107660985_107664450_107664598_107664977
ENSMUSG00000032582.15_107673681_107729387_1	chr9	-	429	6	ISM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	20633	22919	20633	-22919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGTAAGTGTCTTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	107729387	107673680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323
ENSMUSG00000032583.8_107765381_107779964_1	chr9	+	1277	4	ISM	ENSMUSG00000032583.8	ENST00000455683.6	1595	5	60	356	0	-356	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTAGCCCTAGAGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	107765380	107779964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107765602_107775870_107776011_107778393_107779160_107779814
ENSMUSG00000032583.8_107765485_107780338_1	chr9	+	1449	5	FSM	ENSMUSG00000032583.8	ENST00000455683.6	1595	5	164	-18	104	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTGTCATTGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	107765484	107780338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107765602_107775870_107776011_107778393_107779160_107779814_107779963_107780060
ENSMUSG00000032583.8_107777461_107778705_1	chr9	+	566	2	ISM	ENSMUSG00000032583.8	ENSMUST00000035202.4	2042	6	12080	1633	12080	-1615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGCAGGCGCGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	107777460	107778705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107777715_107778393
ENSMUSG00000032583.8_107777607_107778885_1	chr9	+	600	2	ISM	ENSMUSG00000032583.8	ENSMUST00000035202.4	2042	6	12226	1453	12226	-1435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAAGTTCAGTGCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	107777606	107778885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107777715_107778393
ENSMUSG00000032586.10_107828166_107848139_1	chr9	+	1099	8	NNC	ENSMUSG00000032586.10	novel	1109	8	NA	NA	5	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCAAGCTTCTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	107828165	107848139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107828372_107833063_107833122_107833544_107833629_107840029_107840120_107840527_107840617_107845792_107845987_107847667_107847818_107847911
ENSMUSG00000032586.10_107828166_107848139_3	chr9	+	1103	8	NNC	ENSMUSG00000032586.10	novel	1109	8	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCAAGCTTCTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	107828165	107848139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107828372_107833063_107833122_107833544_107833629_107840029_107840120_107840527_107840617_107845792_107845986_107847667_107847818_107847906
ENSMUSG00000032586.10_107828166_107848139_6	chr9	+	1104	8	FSM	ENSMUSG00000032586.10	ENST00000469027.5	1109	8	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCAAGCTTCTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	107828165	107848139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107828372_107833063_107833122_107833544_107833629_107840029_107840120_107840527_107840617_107845792_107845987_107847667_107847818_107847906
ENSMUSG00000032586.10_107828166_107848139_7	chr9	+	1099	8	NNC	ENSMUSG00000032586.10	novel	1109	8	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCAAGCTTCTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	107828165	107848139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107828372_107833063_107833122_107833544_107833629_107840029_107840120_107840527_107840617_107845797_107845987_107847667_107847818_107847906
ENSMUSG00000032586.10_107838186_107848298_1	chr9	+	999	10	ISM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	10031	1171	10025	159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCAGAGTCATGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	107838185	107848298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ENSMUSG00000032586.10_107839432_107848504_1	chr9	+	1026	8	ISM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	11277	965	11271	365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGCTACAACCAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	107839431	107848504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ENSMUSG00000032586.10_107845876_107848816_1	chr9	+	967	5	ISM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	17721	653	17715	-653	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCCAGGGCACAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	107845875	107848816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ENSMUSG00000032590.15_107962612_107964970_1	chr9	-	969	8	ISM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	6835	0	6835	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTGTGCTGGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	107964970	107962611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921
ENSMUSG00000032590.15_107962612_107965016_1	chr9	-	1015	8	ISM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	6789	0	6789	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTGTGCTGGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	107965016	107962611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921
ENSMUSG00000032590.15_107962791_107965507_1	chr9	-	928	9	ISM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	6298	179	6298	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACACTTGGGCAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	107965507	107962790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459
ENSMUSG00000032590.15_107963018_107967328_1	chr9	-	918	10	ISM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	4477	406	4477	-406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAAGCAGGGTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	107967328	107963017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287
ENSMUSG00000032590.15_107963113_107968480_1	chr9	-	1001	10	ISM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	3325	501	3325	-501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGAGCTCAGCTCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	107968480	107963112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441
ENSMUSG00000032590.15_107963347_107969088_1	chr9	-	997	10	ISM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	2717	735	2717	-735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGATTGGTGAGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	107969088	107963346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966
ENSMUSG00000032590.15_107963482_107969373_1	chr9	-	990	12	ISM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	2432	870	2432	-870	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCCTTATGGGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	107969373	107963481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286
ENSMUSG00000032590.15_107964233_107969576_1	chr9	-	950	11	ISM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	2229	1621	2229	-1621	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACTACTGGGTAAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	107969576	107964232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474
ENSMUSG00000032590.15_107964425_107969825_1	chr9	-	944	11	ISM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	1980	1813	1980	-1813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTCCAGATAAGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	107969825	107964424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752
ENSMUSG00000032590.15_107965006_107970029_1	chr9	-	936	11	ISM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	1776	2394	1776	-2394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGGAGGCTGAACCTATT	NA	NA	NA	NA	NA	NA	NA	NA	107970029	107965005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005
ENSMUSG00000032590.15_107965460_107970273_1	chr9	-	1027	11	ISM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	1532	2848	1532	-2848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATTGTGGGTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	107970273	107965459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179
ENSMUSG00000032590.15_107967287_107970947_1	chr9	-	1014	10	ISM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	858	4675	858	-4675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGCCCCTGATTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	107970947	107967286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820
ENSMUSG00000032590.15_107968967_107971665_1	chr9	-	1019	10	ISM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	140	6355	140	-6355	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGAAGTGGGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	107971665	107968966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
ENSMUSG00000032590.15_107969294_107971805_1	chr9	-	989	8	ISM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	0	6682	0	-6682	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGCAGGTGAGAAAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	107971805	107969293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
ENSMUSG00000032594.12_107879700_107925711_1	chr9	+	4289	6	FSM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	0	270	0	-266	multi-exon	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTCCTTTGCTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	107879699	107925711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922661
ENSMUSG00000032594.12_107879828_107925783_1	chr9	+	4233	6	FSM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	128	198	-6	-194	multi-exon	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGCTACACACCCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	107879827	107925783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922661
ENSMUSG00000032594.12_107879870_107925828_1	chr9	+	4236	6	FSM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	170	153	25	-149	multi-exon	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCGCTTAGGCGCGC	NA	NA	NA	NA	NA	NA	NA	NA	107879869	107925828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922661
ENSMUSG00000032594.12_107901301_107925981_1	chr9	+	4238	5	ISM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	21601	0	21456	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	107901300	107925981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922661
ENSMUSG00000032599.13_108662716_108674680_1	chr9	+	702	3	FSM	ENSMUSG00000032599.13	ENST00000450045.5	710	3	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGTCGGCACCGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	108662715	108674680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108662810_108673262_108673596_108674405
ENSMUSG00000032599.13_108673263_108674680_1	chr9	+	601	2	NNC	ENSMUSG00000032599.13	novel	710	3	NA	NA	-67	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGTCGGCACCGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	108673262	108674680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108673596_108674412
ENSMUSG00000032599.13_108673330_108674892_1	chr9	+	753	2	ISM	ENSMUSG00000032599.13	ENST00000450045.5	710	3	10622	-212	0	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGGCTCACCCACCATG	NA	NA	NA	NA	NA	NA	NA	NA	108673329	108674892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108673596_108674405
ENSMUSG00000032601.14_108569496_108626702_1	chr9	+	1813	12	NNC	ENSMUSG00000032601.14	novel	1851	12	NA	NA	57	25	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	108569495	108626702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622686_108622823_108624059_108624196_108626254
ENSMUSG00000032601.14_108569496_108626702_2	chr9	+	1813	12	NNC	ENSMUSG00000032601.14	novel	1851	12	NA	NA	57	25	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	108569495	108626702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605378_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059_108624196_108626254
ENSMUSG00000032601.14_108569496_108626702_3	chr9	+	1814	12	NNC	ENSMUSG00000032601.14	novel	1851	12	NA	NA	57	25	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	108569495	108626702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059_108624196_108626259
ENSMUSG00000032601.14_108569496_108626702_4	chr9	+	1819	12	FSM	ENSMUSG00000032601.14	ENST00000454963.5	1851	12	57	-25	57	25	multi-exon	FALSE	canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	108569495	108626702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059_108624196_108626254
ENSMUSG00000032601.14_108569656_108626725_1	chr9	+	1682	12	FSM	ENSMUSG00000032601.14	ENST00000454963.5	1851	12	217	-48	0	48	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGCACTCCAGCCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	108569655	108626725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059_108624196_108626254
ENSMUSG00000032601.14_108569656_108626725_2	chr9	+	1676	12	NNC	ENSMUSG00000032601.14	novel	1851	12	NA	NA	0	48	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGCACTCCAGCCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	108569655	108626725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622686_108622823_108624059_108624196_108626254
ENSMUSG00000032602.7_108539297_108560263_1	chr9	+	864	8	ISM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	0	1577	0	-1573	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAATGGTTTCAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	108539296	108560263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247
ENSMUSG00000032602.7_108539442_108560334_1	chr9	+	790	8	ISM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	145	1506	119	-1502	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGCAGTCATGATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	108539441	108560334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247
ENSMUSG00000032602.7_108539511_108560372_1	chr9	+	759	8	ISM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	214	1468	188	-1464	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATCTGAGGGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	108539510	108560372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247
ENSMUSG00000032602.7_108546968_108561140_1	chr9	+	845	8	ISM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	7671	700	7645	-696	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAGGGGCAGGAGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	108546967	108561140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
ENSMUSG00000032602.7_108547036_108561176_1	chr9	+	813	8	ISM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	7739	664	7713	-660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGAAGAGGTGTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	108547035	108561176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
ENSMUSG00000032602.7_108559185_108561521_1	chr9	+	785	4	ISM	ENSMUSG00000032602.7	ENST00000430379.5	1534	7	19862	315	19862	-315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCCTGGCTGTGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	108559184	108561521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108559244_108559545_108559656_108560247_108560373_108561030
ENSMUSG00000032602.7_108559609_108561687_1	chr9	+	829	3	ISM	ENSMUSG00000032602.7	ENST00000430379.5	1534	7	20286	149	20286	-149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGAGAATTTTCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	108559608	108561687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108559656_108560247_108560373_108561030
ENSMUSG00000032602.7_108560342_108561840_1	chr9	+	841	2	ISM	ENSMUSG00000032602.7	ENST00000430379.5	1534	7	21019	-4	21019	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCGTGTGATATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	108560341	108561840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108560373_108561030
ENSMUSG00000032604.17_108385647_108388373_1	chr9	+	485	7	ISM	ENSMUSG00000032604.17	ENSMUST00000006838.16	2800	24	742	4767	388	-4767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCGGGGGGAGGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	108385646	108388373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337
ENSMUSG00000032604.17_108386348_108388817_1	chr9	+	501	7	ISM	ENSMUSG00000032604.17	ENSMUST00000006838.16	2800	24	1443	4323	1089	-4323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCATTTGTCTAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	108386347	108388817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730
ENSMUSG00000032604.17_108386678_108389781_1	chr9	+	487	7	ISM	ENSMUSG00000032604.17	ENSMUST00000006838.16	2800	24	1773	3359	1419	-3359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGATGAGCTTGAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	108386677	108389781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681
ENSMUSG00000032604.17_108387485_108389955_1	chr9	+	465	6	ISM	ENSMUSG00000032604.17	ENSMUST00000006838.16	2800	24	2580	3185	2226	-3185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCGTGGAACTCATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	108387484	108389955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898
ENSMUSG00000032604.17_108388574_108390321_1	chr9	+	474	6	ISM	ENSMUSG00000032604.17	ENSMUST00000134939.9	2374	23	3315	2819	3315	-2819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAAGATGGCAAGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	108388573	108390321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264
ENSMUSG00000032604.17_108390329_108391329_1	chr9	+	452	5	ISM	ENSMUSG00000032604.17	ENSMUST00000134939.9	2374	23	5070	1811	5070	-1811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGATGCAGCCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	108390328	108391329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263
ENSMUSG00000032604.17_108390925_108391804_1	chr9	+	481	5	ISM	ENSMUSG00000032604.17	ENSMUST00000134939.9	2374	23	5666	1336	5666	-1336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCATTGAACTGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	108390924	108391804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741
ENSMUSG00000032604.17_108391372_108392359_1	chr9	+	483	6	ISM	ENSMUSG00000032604.17	ENSMUST00000134939.9	2374	23	6113	781	6113	-781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCTTTGACAAGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	108391371	108392359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305
ENSMUSG00000032604.17_108391525_108392431_1	chr9	+	483	5	ISM	ENSMUSG00000032604.17	ENSMUST00000134939.9	2374	23	6266	709	6266	-709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTAATTTGACCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	108391524	108392431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305
ENSMUSG00000032604.17_108391950_108393140_1	chr9	+	462	4	ISM	ENSMUSG00000032604.17	ENSMUST00000134939.9	2374	23	6691	0	6691	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTCTCTGTTGTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	108391949	108393140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108392073_108392165_108392233_108392305_108392432_108392994
ENSMUSG00000032607.13_108174323_108178770_1	chr9	+	1067	7	FSM	ENSMUSG00000032607.13	ENST00000458307.6	1029	7	0	-38	0	38	multi-exon	FALSE	canonical	NA	NA	NA	NA	1598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGAGTACAACTCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	108174322	108178770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108174495_108174910_108174992_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
ENSMUSG00000032607.13_108174323_108178770_2	chr9	+	1062	7	NNC	ENSMUSG00000032607.13	novel	1029	7	NA	NA	0	38	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGAGTACAACTCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	108174322	108178770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108174495_108174910_108174992_108176578_108176658_108176943_108177090_108177732_108177914_108178276_108178428_108178518
ENSMUSG00000032607.13_108174323_108178770_3	chr9	+	1061	7	NNC	ENSMUSG00000032607.13	novel	1029	7	NA	NA	0	38	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGAGTACAACTCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	108174322	108178770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108174495_108174916_108174992_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
ENSMUSG00000032607.13_108174323_108178770_4	chr9	+	1060	7	NNC	ENSMUSG00000032607.13	novel	1029	7	NA	NA	0	38	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGAGTACAACTCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	108174322	108178770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108174495_108174910_108174992_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178421_108178518
ENSMUSG00000032607.13_108174323_108178770_5	chr9	+	1061	7	NNC	ENSMUSG00000032607.13	novel	1029	7	NA	NA	0	38	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGAGTACAACTCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	108174322	108178770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108174495_108174910_108174992_108176584_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
ENSMUSG00000032607.13_108174329_108178588_1	chr9	+	855	7	FSM	ENSMUSG00000032607.13	ENST00000637682.1	1005	7	6	144	6	-144	multi-exon	TRUE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGTCGACCAGGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	108174328	108178588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178518
ENSMUSG00000032607.13_108174357_108178287_1	chr9	+	335	3	ISM	ENSMUSG00000032607.13	ENST00000636199.1	723	4	34	445	34	-445	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGGACTTCCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	108174356	108178287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108174495_108177732_108177914_108178271
ENSMUSG00000032607.13_108174365_108178653_1	chr9	+	884	7	FSM	ENSMUSG00000032607.13	ENST00000637682.1	1005	7	42	79	42	-79	multi-exon	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAATGCCCTTTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	108174364	108178653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178518
ENSMUSG00000032607.13_108174396_108178350_1	chr9	+	359	3	ISM	ENSMUSG00000032607.13	ENST00000636199.1	723	4	73	382	73	-382	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGTGGGGCTGATATGTG	NA	NA	NA	NA	NA	NA	NA	NA	108174395	108178350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108174495_108177732_108177914_108178271
ENSMUSG00000032607.13_108174423_108178770_1	chr9	+	943	7	FSM	ENSMUSG00000032607.13	ENST00000637682.1	1005	7	100	-38	100	38	multi-exon	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGAGTACAACTCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	108174422	108178770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178518
ENSMUSG00000032607.13_108174448_108178399_1	chr9	+	356	3	ISM	ENSMUSG00000032607.13	ENST00000636199.1	723	4	125	333	125	-333	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGAACACAGAAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	108174447	108178399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108174495_108177732_108177914_108178271
ENSMUSG00000032612.15_108225112_108256522_1	chr9	+	1947	15	ISM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	60	13222	0	-13197	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCAATGGCTCTAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	108225111	108256522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463
ENSMUSG00000032612.15_108225112_108265504_1	chr9	+	2430	19	ISM	ENSMUSG00000032612.15	ENSMUST00000194959.6	3436	21	0	4215	0	-4215	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGTCAGCAAGGCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	108225111	108265504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475
ENSMUSG00000032612.15_108228145_108258604_1	chr9	+	1913	15	ISM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	3093	11140	3033	-11115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGGAGATGACCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	108228144	108258604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526
ENSMUSG00000032612.15_108228199_108258657_1	chr9	+	1912	15	ISM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	3147	11087	3087	-11062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGAGGCTCTTTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	108228198	108258657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526
ENSMUSG00000032612.15_108233653_108268991_1	chr9	+	2431	19	ISM	ENSMUSG00000032612.15	ENSMUST00000194959.6	3436	21	8541	728	8541	-728	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCATGGGGGATGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	108233652	108268991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ENSMUSG00000032612.15_108239759_108262029_1	chr9	+	1925	15	ISM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	14707	7715	14647	-7690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGCAGGCAACAAAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	108239758	108262029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005
ENSMUSG00000032612.15_108239759_108269248_1	chr9	+	2474	17	ISM	ENSMUSG00000032612.15	ENSMUST00000194959.6	3436	21	14647	471	14647	-471	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAACCTGTGGAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	108239758	108269248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108239906_108240035_108240098_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ENSMUSG00000032612.15_108239835_108262104_1	chr9	+	1924	15	ISM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	14783	7640	14723	-7615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGATACTGGCGGGATA	NA	NA	NA	NA	NA	NA	NA	NA	108239834	108262104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005
ENSMUSG00000032612.15_108239893_108262155_1	chr9	+	1917	15	ISM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	14841	7589	14781	-7564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGTGTGCACAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	108239892	108262155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005
ENSMUSG00000032612.15_108240032_108265579_1	chr9	+	2012	15	ISM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	14980	4165	14920	-4140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTATTGGCATCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	108240031	108265579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475
ENSMUSG00000032612.15_108243960_108269444_1	chr9	+	2461	15	ISM	ENSMUSG00000032612.15	ENSMUST00000194959.6	3436	21	18848	275	18848	-275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGCCTCCAGCAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	108243959	108269444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ENSMUSG00000032612.15_108251423_108269744_1	chr9	+	2001	10	ISM	ENSMUSG00000032612.15	ENSMUST00000194959.6	3436	21	26311	-25	26311	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTCCACGTTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	108251422	108269744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ENSMUSG00000032615.15_59739054_59743631_1	chr11	+	160	2	ISM	ENSMUSG00000032615.15	ENST00000616989.1	617	5	25	23149	25	-23149	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGGGAGTCAAAGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	59739053	59743631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59739199_59743616
ENSMUSG00000032615.15_59739093_59743693_1	chr11	+	183	2	ISM	ENSMUSG00000032615.15	ENST00000616989.1	617	5	64	23087	64	-23087	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGATGGCCAATCTAC	NA	NA	NA	NA	NA	NA	NA	NA	59739092	59743693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59739199_59743616
ENSMUSG00000032615.15_59739152_59751596_1	chr11	+	169	3	ISM	ENSMUSG00000032615.15	ENST00000616989.1	617	5	123	15184	123	-15184	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCCATCAAGATGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	59739151	59751596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59739199_59743616_59743718_59751575
ENSMUSG00000032615.15_59743664_59765448_1	chr11	+	185	3	ISM	ENSMUSG00000032615.15	ENST00000616989.1	617	5	4635	1332	4635	-1332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTCAGCCGACCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	59743663	59765448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59743718_59751575_59751637_59765378
ENSMUSG00000032615.15_59751611_59766652_1	chr11	+	183	3	ISM	ENSMUSG00000032615.15	ENST00000616989.1	617	5	12582	128	12582	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCACATCCTCTTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	59751610	59766652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59751637_59765378_59765514_59766630
ENSMUSG00000032615.15_59765390_59766668_1	chr11	+	162	2	ISM	ENSMUSG00000032615.15	ENST00000616989.1	617	5	26361	112	26361	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCCTGCCACAACTACCA	NA	NA	NA	NA	NA	NA	NA	NA	59765389	59766668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59765514_59766630
ENSMUSG00000032615.15_59765428_59766732_1	chr11	+	188	2	ISM	ENSMUSG00000032615.15	ENST00000616989.1	617	5	26399	48	26399	-48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGACTGGAAGGCCATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	59765427	59766732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59765514_59766630
ENSMUSG00000032615.15_59765483_59766781_1	chr11	+	182	2	ISM	ENSMUSG00000032615.15	ENST00000616989.1	617	5	26454	-1	26454	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGGCTCTCTCGTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	59765482	59766781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59765514_59766630
ENSMUSG00000032621.9_103878430_103881312_1	chr13	-	1815	2	ISM	ENSMUSG00000032621.9	ENSMUST00000210489.2	6330	10	19778	2574	19778	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	103881312	103878429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103880225_103881292
ENSMUSG00000032621.9_103878629_103885345_1	chr13	-	1820	3	ISM	ENSMUSG00000032621.9	ENSMUST00000210489.2	6330	10	15745	2773	15745	-509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCCTTACCTCATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	103885345	103878628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103880225_103881292_103881438_103885266
ENSMUSG00000032621.9_103878768_103888991_1	chr13	-	1788	4	ISM	ENSMUSG00000032621.9	ENSMUST00000210489.2	6330	10	12099	2912	12099	-648	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTGCACTCCGCACTA	NA	NA	NA	NA	NA	NA	NA	NA	103888991	103878767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901
ENSMUSG00000032621.9_103878905_103889118_1	chr13	-	1778	4	ISM	ENSMUSG00000032621.9	ENSMUST00000210489.2	6330	10	11972	3049	11972	-785	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAAACTTATGGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	103889118	103878904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901
ENSMUSG00000032621.9_103879251_103895691_1	chr13	-	1774	7	ISM	ENSMUSG00000032621.9	ENSMUST00000210489.2	6330	10	5399	3395	5399	-1131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGAAGCTGTAGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	103895691	103879250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676
ENSMUSG00000032621.9_103879298_103895748_1	chr13	-	1784	7	ISM	ENSMUSG00000032621.9	ENSMUST00000210489.2	6330	10	5342	3442	5342	-1178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTAGAAAACGGAAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	103895748	103879297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676
ENSMUSG00000032621.9_103879416_103896990_1	chr13	-	1792	8	ISM	ENSMUSG00000032621.9	ENSMUST00000210489.2	6330	10	4100	3560	4100	-1296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCAGAATCATTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	103896990	103879415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923
ENSMUSG00000032621.9_103879435_103897079_1	chr13	-	1862	8	ISM	ENSMUSG00000032621.9	ENSMUST00000210489.2	6330	10	4011	3579	4011	-1315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTAATAACGTATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	103897079	103879434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923
ENSMUSG00000032621.9_103879586_103897601_1	chr13	-	1798	9	ISM	ENSMUSG00000032621.9	ENSMUST00000210489.2	6330	10	3489	3730	3489	-1466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTCACTACTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	103897601	103879585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537
ENSMUSG00000032621.9_103879652_103897647_1	chr13	-	1778	9	ISM	ENSMUSG00000032621.9	ENSMUST00000210489.2	6330	10	3443	3796	3443	-1532	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAAAGTGCAAATGATG	NA	NA	NA	NA	NA	NA	NA	NA	103897647	103879651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537
ENSMUSG00000032621.9_103879992_103910850_1	chr13	-	1796	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	266	1872	266	-1872	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATATATGGTAACTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	103910850	103879991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ENSMUSG00000032621.9_103880119_103910900_1	chr13	-	1719	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	216	1999	216	-1999	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAACCAAATGAGGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	103910900	103880118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ENSMUSG00000032621.9_103880119_103910971_1	chr13	-	1790	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	145	1999	145	-1999	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAACCAAATGAGGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	103910971	103880118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ENSMUSG00000032621.9_103881292_103911125_1	chr13	-	1839	11	ISM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	-9	3172	0	-3172	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCGCTCAGCCAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	103911125	103881291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ENSMUSG00000032621.9_103902652_103911125_1	chr13	-	1344	3	FSM	ENSMUSG00000032621.9	ENST00000612404.4	1344	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTACTCCAGGGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	103911125	103902651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_103903543_103905824_103905959_103910806
ENSMUSG00000032624.17_83658528_83732860_1	chr17	+	628	4	ISM	ENSMUSG00000032624.17	ENST00000401738.3	3034	23	25	52660	25	-52660	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAACTGTCCCCAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	83658527	83732860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686
ENSMUSG00000032624.17_83658644_83734780_1	chr17	+	641	5	ISM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	0	50816	0	-50740	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGCTATACTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	83658643	83734780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651
ENSMUSG00000032624.17_83717454_83735684_1	chr17	+	681	5	NIC	ENSMUSG00000032624.17	novel	3034	23	NA	NA	58810	-49836	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTCCGCAGGTTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	83717453	83735684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_+_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735620
ENSMUSG00000032624.17_83717564_83747542_1	chr17	+	647	6	NIC	ENSMUSG00000032624.17	novel	3034	23	NA	NA	58920	-37978	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAGAACTGCCTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	83717563	83747542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_+_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735620_83735678_83747459
ENSMUSG00000032624.17_83729097_83748827_1	chr17	+	655	6	NIC	ENSMUSG00000032624.17	novel	3034	23	NA	NA	70453	-36693	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGGACTCAGCGACACTA	NA	NA	NA	NA	NA	NA	NA	NA	83729096	83748827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_+_83729165_83732686_83732861_83734651_83734781_83735620_83735678_83747459_83747584_83748724
ENSMUSG00000032624.17_83732731_83753390_1	chr17	+	680	7	ISM	ENSMUSG00000032624.17	ENST00000401738.3	3034	23	74228	32130	74087	-32130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGTGTGGGATTCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	83732730	83753390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83732861_83734651_83734785_83735620_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374
ENSMUSG00000032624.17_83732779_83753451_1	chr17	+	693	7	ISM	ENSMUSG00000032624.17	ENST00000401738.3	3034	23	74276	32069	74135	-32069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGAGTAGGATGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	83732778	83753451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83732861_83734651_83734785_83735620_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374
ENSMUSG00000032624.17_83734650_83755684_1	chr17	+	743	7	ISM	ENSMUSG00000032624.17	ENST00000401738.3	3034	23	76147	29836	76006	-29836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATCACATAAACTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	83734649	83755684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83734785_83735620_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588
ENSMUSG00000032624.17_83734751_83758092_1	chr17	+	660	8	ISM	ENSMUSG00000032624.17	ENST00000401738.3	3034	23	76248	27428	76107	-27428	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTGTAGAATTCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	83734750	83758092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83734785_83735620_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074
ENSMUSG00000032624.17_83735616_83758209_1	chr17	+	748	7	ISM	ENSMUSG00000032624.17	ENST00000401738.3	3034	23	77113	27311	76972	-27311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGATCAGACTGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	83735615	83758209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074
ENSMUSG00000032624.17_83747509_83758409_1	chr17	+	679	7	ISM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	88865	27187	88865	-27111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAATGGAGATGTTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	83747508	83758409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367
ENSMUSG00000032624.17_83748735_83761847_1	chr17	+	706	7	ISM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	90091	23749	90091	-23673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAATCAAAGCTCATGAT	NA	NA	NA	NA	NA	NA	NA	NA	83748734	83761847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829
ENSMUSG00000032624.17_83748826_83761879_1	chr17	+	647	7	ISM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	90182	23717	90182	-23641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTTGTCAGATGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	83748825	83761879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829
ENSMUSG00000032624.17_83748845_83761970_1	chr17	+	719	7	ISM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	90201	23626	90201	-23550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATAGAGGTAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	83748844	83761970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829
ENSMUSG00000032624.17_83755644_83763728_1	chr17	+	648	6	ISM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	97000	21868	97000	-21792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGCTCAGGACAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	83755643	83763728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670
ENSMUSG00000032624.17_83758192_83768972_1	chr17	+	647	7	ISM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	99548	16624	99548	-16548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGAAACAAGAGATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	83758191	83768972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957
ENSMUSG00000032624.17_83758434_83770959_1	chr17	+	670	7	ISM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	99790	14637	99790	-14561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTATTTACCTCTACACA	NA	NA	NA	NA	NA	NA	NA	NA	83758433	83770959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926
ENSMUSG00000032624.17_83761945_83781105_1	chr17	+	665	8	ISM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	103301	4491	103301	-4415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGAACCGATCAGATTGC	NA	NA	NA	NA	NA	NA	NA	NA	83761944	83781105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078
ENSMUSG00000032624.17_83763515_83784674_1	chr17	+	688	8	ISM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	104871	922	104871	-846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTCGATCCCACAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	83763514	83784674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632
ENSMUSG00000032624.17_83763730_83785215_1	chr17	+	727	8	ISM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	105086	381	105086	-305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGTGGGAAGGATATGAG	NA	NA	NA	NA	NA	NA	NA	NA	83763729	83785215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ENSMUSG00000032624.17_83770924_83785336_1	chr17	+	621	5	ISM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	112280	260	112280	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCCGTCTAACTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	83770923	83785336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ENSMUSG00000032624.17_83770959_83785402_1	chr17	+	652	5	ISM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	112315	194	112315	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGATGGGCAGCTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	83770958	83785402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ENSMUSG00000032624.17_83770988_83785483_1	chr17	+	704	5	ISM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	112344	113	112344	-37	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCGAAGACCTTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	83770987	83785483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ENSMUSG00000032633.13_59682616_59685185_1	chr11	-	1215	3	ISM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	15229	0	15229	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGAATGTTGAAACACAA	NA	NA	NA	NA	NA	NA	NA	NA	59685185	59682615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59683638_59684911_59685018_59685098
ENSMUSG00000032633.13_59682616_59685241_1	chr11	-	1271	3	ISM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	15173	0	15173	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGAATGTTGAAACACAA	NA	NA	NA	NA	NA	NA	NA	NA	59685241	59682615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59683638_59684911_59685018_59685098
ENSMUSG00000032633.13_59682731_59686014_1	chr11	-	1193	4	ISM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	14400	115	14400	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGACGTAGCTTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	59686014	59682730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966
ENSMUSG00000032633.13_59682925_59688899_1	chr11	-	1208	6	ISM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	11515	309	11515	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCATGGTGTGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	59688899	59682924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880
ENSMUSG00000032633.13_59682977_59688948_1	chr11	-	1205	6	ISM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	11466	361	11466	-361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATTTTGGTTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	59688948	59682976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880
ENSMUSG00000032633.13_59683071_59689043_1	chr11	-	1206	6	ISM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	11371	455	11371	-455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTCAGGTCACGTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	59689043	59683070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880
ENSMUSG00000032633.13_59683256_59691923_1	chr11	-	1196	8	ISM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	8491	640	8491	-640	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCTGTCAGGACCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	59691923	59683255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868
ENSMUSG00000032633.13_59683307_59691987_1	chr11	-	1209	8	ISM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	8427	691	8427	-691	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCATGTTGAAATGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	59691987	59683306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868
ENSMUSG00000032633.13_59683462_59693050_1	chr11	-	1192	9	ISM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	7364	846	7364	-846	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGCTACAGAGTCACGG	NA	NA	NA	NA	NA	NA	NA	NA	59693050	59683461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954
ENSMUSG00000032633.13_59683517_59693099_1	chr11	-	1186	9	ISM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	7315	901	7315	-901	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACGGGACTGAGCAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	59693099	59683516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954
ENSMUSG00000032633.13_59683566_59693151_1	chr11	-	1189	9	ISM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	7263	950	7263	-950	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCTAGGCGCATCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	59693151	59683565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954
ENSMUSG00000032633.13_59684958_59694664_1	chr11	-	1186	9	ISM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	5750	2342	5750	-2342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGGACCAATGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	59694664	59684957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574
ENSMUSG00000032633.13_59685135_59695423_1	chr11	-	1224	9	ISM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	4991	2519	4991	-2519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGACCAGTGGTAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	59695423	59685134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346
ENSMUSG00000032633.13_59685212_59695456_1	chr11	-	1180	9	ISM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	4958	2596	4958	-2596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCACACGGCCACTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	59695456	59685211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346
ENSMUSG00000032633.13_59688879_59700537_1	chr11	-	1254	8	ISM	ENSMUSG00000032633.13	ENSMUST00000102697.10	3437	13	305	6645	-123	-6263	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAAAGGGGGCGGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	59700537	59688878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ENSMUSG00000032633.13_59690211_59700750_1	chr11	-	1243	7	ISM	ENSMUSG00000032633.13	ENSMUST00000102697.10	3437	13	92	7977	92	-7595	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACCCTGGTCCAGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	59700750	59690210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ENSMUSG00000032640.11_65759459_65820860_1	chr7	+	1294	3	FSM	ENSMUSG00000032640.11	ENSMUST00000036372.8	4176	3	196	2686	196	-2686	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCCGCCAGAGAGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	65759458	65820860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_65759976_65774989_65775486_65820579
ENSMUSG00000032640.11_65759741_65821141_1	chr7	+	1293	3	FSM	ENSMUSG00000032640.11	ENSMUST00000036372.8	4176	3	478	2405	478	-2405	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGAAGATGACGGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	65759740	65821141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_65759976_65774989_65775486_65820579
ENSMUSG00000032640.11_65759878_65821270_1	chr7	+	1285	3	FSM	ENSMUSG00000032640.11	ENSMUST00000036372.8	4176	3	615	2276	615	-2276	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTCATTCCTGTCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	65759877	65821270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_65759976_65774989_65775486_65820579
ENSMUSG00000032640.11_65775168_65821575_1	chr7	+	1314	2	ISM	ENSMUSG00000032640.11	ENSMUST00000036372.8	4176	3	15905	1971	15905	-1971	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGAGGGTTTTCAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	65775167	65821575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_65775486_65820579
ENSMUSG00000032640.11_65775308_65821729_1	chr7	+	1328	2	ISM	ENSMUSG00000032640.11	ENSMUST00000036372.8	4176	3	16045	1817	16045	-1817	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAATCATCTTTAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	65775307	65821729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_65775486_65820579
ENSMUSG00000032652.14_134807218_134828101_1	chr6	+	447	3	ISM	ENSMUSG00000032652.14	ENST00000228865.3	1362	4	103	5561	0	-5022	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCACTGGCGAGGAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	134807217	134828101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_134807408_134826065_134826264_134828042
ENSMUSG00000032652.14_134807367_134832973_1	chr6	+	421	4	FSM	ENSMUSG00000032652.14	ENST00000228865.3	1362	4	252	689	149	-150	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGTGTGATGTCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	134807366	134832973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_134807408_134826065_134826264_134828042_134828188_134832936
ENSMUSG00000032652.14_134826171_134833123_1	chr6	+	425	3	ISM	ENSMUSG00000032652.14	ENST00000228865.3	1362	4	19056	539	18953	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCCGGCGACCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	134826170	134833123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_134826264_134828042_134828188_134832936
ENSMUSG00000032652.14_134826217_134833168_1	chr6	+	424	3	ISM	ENSMUSG00000032652.14	ENST00000228865.3	1362	4	19102	494	18999	45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTAACAGTCGTGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	134826216	134833168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_134826264_134828042_134828188_134832936
ENSMUSG00000032657.16_89091128_89094436_1	chr3	+	650	6	ISM	ENSMUSG00000032657.16	ENST00000350210.6	2339	9	168	2159	168	-2159	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCATGCCTGCTGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	89091127	89094436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89091256_89092195_89092304_89092743_89092917_89093040_89093141_89094085_89094156_89094365
ENSMUSG00000032657.16_89091135_89096595_1	chr3	+	2398	11	FSM	ENSMUSG00000032657.16	ENSMUST00000117278.8	2593	11	195	0	175	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTTTGGAGTATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	89091134	89096595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89091256_89091719_89091831_89091936_89092057_89092195_89092304_89092740_89092917_89093040_89093141_89094085_89094156_89094365_89094912_89095382_89095452_89095529_89095784_89095872
ENSMUSG00000032657.16_89091175_89094494_1	chr3	+	661	6	ISM	ENSMUSG00000032657.16	ENST00000350210.6	2339	9	215	2101	215	-2101	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCATCCAGCGCAGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	89091174	89094494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89091256_89092195_89092304_89092743_89092917_89093040_89093141_89094085_89094156_89094365
ENSMUSG00000032657.16_89091234_89094551_1	chr3	+	659	6	ISM	ENSMUSG00000032657.16	ENST00000350210.6	2339	9	274	2044	274	-2044	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTTTGAAGACAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	89091233	89094551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89091256_89092195_89092304_89092743_89092917_89093040_89093141_89094085_89094156_89094365
ENSMUSG00000032657.16_89092222_89094606_1	chr3	+	669	5	ISM	ENSMUSG00000032657.16	ENSMUST00000117278.8	2593	11	1282	1989	1262	-1989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTCAGCCCCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	89092221	89094606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89092304_89092740_89092917_89093040_89093141_89094085_89094156_89094365
ENSMUSG00000032657.16_89093039_89094911_1	chr3	+	718	3	ISM	ENSMUSG00000032657.16	ENST00000350210.6	2339	9	2079	1684	2079	-1684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTAGTTTGGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	89093038	89094911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89093141_89094085_89094156_89094365
ENSMUSG00000032657.16_89094083_89095451_1	chr3	+	688	3	ISM	ENSMUSG00000032657.16	ENST00000350210.6	2339	9	3123	1144	3123	-1144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCGTGTGGGGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	89094082	89095451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89094156_89094365_89094912_89095382
ENSMUSG00000032661.10_120910938_120912170_1	chr5	-	365	2	FSM	ENSMUSG00000032661.10	ENST00000680966.1	411	2	46	0	46	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGGTTGGTCCTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	120912170	120910937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_120911064_120911931
ENSMUSG00000032667.18_5266188_5269011_1	chr6	-	169	3	ISM	ENSMUSG00000032667.18	ENSMUST00000057792.9	2409	9	29444	2041	29444	-2041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACATCTGGGTCGGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5269011	5266187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_5266241_5266964_5267047_5268977
ENSMUSG00000032667.18_5267001_5269094_1	chr6	-	163	2	ISM	ENSMUSG00000032667.18	ENSMUST00000057792.9	2409	9	29361	2854	29361	-2854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAACAACCTAATATGAA	NA	NA	NA	NA	NA	NA	NA	NA	5269094	5267000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_5267047_5268977
ENSMUSG00000032667.18_5272366_5273080_1	chr6	-	166	2	ISM	ENSMUSG00000032667.18	ENSMUST00000057792.9	2409	9	25375	8219	25375	-8219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTGCACCTGAAAACAAT	NA	NA	NA	NA	NA	NA	NA	NA	5273080	5272365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_5272452_5273000
ENSMUSG00000032691.15_59433930_59439067_1	chr11	+	652	3	ISM	ENSMUSG00000032691.15	ENSMUST00000101148.9	4021	10	418	18715	292	-18030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACACAGTGGTGTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	59433929	59439067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59434216_59437599_59437714_59438815
ENSMUSG00000032691.15_59434023_59439188_1	chr11	+	680	3	ISM	ENSMUSG00000032691.15	ENSMUST00000101148.9	4021	10	511	18594	385	-17909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGCCGAGAGGTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	59434022	59439188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59434216_59437599_59437714_59438815
ENSMUSG00000032691.15_59434091_59439224_1	chr11	+	648	3	ISM	ENSMUSG00000032691.15	ENSMUST00000101148.9	4021	10	579	18558	453	-17873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGCAGACCTGATTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	59434090	59439224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59434216_59437599_59437714_59438815
ENSMUSG00000032691.15_59437638_59439401_1	chr11	+	662	2	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	4000	17696	4000	-17696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTAAGCAGCCTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	59437637	59439401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59437714_59438815
ENSMUSG00000032691.15_59437697_59439445_1	chr11	+	647	2	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	4059	17652	4059	-17652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTCATAACGACGAGG	NA	NA	NA	NA	NA	NA	NA	NA	59437696	59439445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59437714_59438815
ENSMUSG00000032691.15_59439995_59442665_1	chr11	+	646	2	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	6357	14432	6357	-14432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCACTGAACTGGACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	59439994	59442665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59440572_59442596
ENSMUSG00000032691.15_59440049_59442718_1	chr11	+	645	2	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	6411	14379	6411	-14379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGTGAGGCACTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	59440048	59442718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59440572_59442596
ENSMUSG00000032691.15_59440152_59446645_1	chr11	+	663	3	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	6514	10452	6514	-10452	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGAGCTGGACCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	59440151	59446645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59440572_59442596_59442768_59446573
ENSMUSG00000032691.15_59440217_59446700_1	chr11	+	653	3	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	6579	10397	6579	-10397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGGACTGAAGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	59440216	59446700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59440572_59442596_59442768_59446573
ENSMUSG00000032691.15_59440325_59449275_1	chr11	+	656	4	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	6687	7822	6687	-7822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGACCAGACTGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	59440324	59449275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59440572_59442596_59442768_59446573_59446745_59449208
ENSMUSG00000032691.15_59440384_59449330_1	chr11	+	652	4	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	6746	7767	6746	-7767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTGTGAAAAGATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	59440383	59449330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59440572_59442596_59442768_59446573_59446745_59449208
ENSMUSG00000032691.15_59440422_59455897_1	chr11	+	695	5	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	6784	1200	6784	-1200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGCTCTGACCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	59440421	59455897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59440572_59442596_59442768_59446573_59446745_59449208_59449380_59455865
ENSMUSG00000032691.15_59440548_59456005_1	chr11	+	677	5	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	6910	1092	6910	-1092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACCCGGACTGTAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	59440547	59456005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59440572_59442596_59442768_59446573_59446745_59449208_59449380_59455865
ENSMUSG00000032691.15_59442650_59456698_1	chr11	+	659	5	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	9012	399	9012	-399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCTGGAATCTCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	59442649	59456698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59442768_59446573_59446745_59449208_59449380_59455865_59456037_59456670
ENSMUSG00000032691.15_59442706_59456751_1	chr11	+	656	5	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	9068	346	9068	-346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTGGGCAACAATGATC	NA	NA	NA	NA	NA	NA	NA	NA	59442705	59456751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59442768_59446573_59446745_59449208_59449380_59455865_59456037_59456670
ENSMUSG00000032691.15_59446600_59457003_1	chr11	+	672	5	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	12962	94	12962	-94	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTAAATCGTGAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	59446599	59457003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59446745_59449208_59449380_59455865_59456037_59456670_59456842_59456989
ENSMUSG00000032691.15_59446657_59457059_1	chr11	+	671	5	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	13019	38	13019	-38	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTATAGTCTTCGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	59446656	59457059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59446745_59449208_59449380_59455865_59456037_59456670_59456842_59456989
ENSMUSG00000032691.15_59446721_59457097_1	chr11	+	645	5	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	13083	0	13083	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGACCACCAGGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	59446720	59457097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59446745_59449208_59449380_59455865_59456037_59456670_59456842_59456989
ENSMUSG00000032702.17_25386582_25411861_1	chr19	+	4768	11	NNC	ENSMUSG00000032702.17	novel	4892	11	NA	NA	117	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGCCCCTGCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	25386581	25411861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_25389129_25399507_25399706_25400282_25400392_25401508_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884_25411422_25411474
ENSMUSG00000032702.17_25386582_25411861_2	chr19	+	4770	11	NNC	ENSMUSG00000032702.17	novel	4892	11	NA	NA	117	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGCCCCTGCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	25386581	25411861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407723_25408242_25408444_25410228_25410328_25410884_25411422_25411474
ENSMUSG00000032702.17_25386582_25411861_3	chr19	+	4775	11	FSM	ENSMUSG00000032702.17	ENST00000382297.7	4892	11	117	0	117	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGCCCCTGCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	25386581	25411861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884_25411422_25411474
ENSMUSG00000032705.10_80522507_80527390_1	chr12	+	540	3	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	14	17505	10	-17505	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGATGTTCAGAAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	80522506	80527390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_80522654_80522731_80522963_80527228
ENSMUSG00000032705.10_80522533_80543721_1	chr12	+	1835	9	FSM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	40	1174	36	-1174	multi-exon	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTGCTCCGAAAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	80522532	80543721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_80522654_80522731_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ENSMUSG00000032705.10_80522596_80543774_1	chr12	+	1825	9	FSM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	103	1121	99	-1121	multi-exon	FALSE	canonical	NA	NA	NA	NA	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGCCTGCAGGTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	80522595	80543774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_80522654_80522731_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ENSMUSG00000032705.10_80522639_80543846_1	chr12	+	1854	9	FSM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	146	1049	142	-1049	multi-exon	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGGGGGAAGCCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	80522638	80543846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_80522654_80522731_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ENSMUSG00000032705.10_80522854_80536248_1	chr12	+	566	4	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	361	8647	357	-8647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATTCCTATGAAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	80522853	80536248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_80522963_80527228_80527486_80531019_80531147_80536175
ENSMUSG00000032705.10_80522854_80536300_1	chr12	+	618	4	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	361	8595	357	-8595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGATGCAGGAATATGG	NA	NA	NA	NA	NA	NA	NA	NA	80522853	80536300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_80522963_80527228_80527486_80531019_80531147_80536175
ENSMUSG00000032705.10_80527255_80544098_1	chr12	+	1834	7	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	4762	797	4758	-797	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTTGTAATTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	80527254	80544098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ENSMUSG00000032705.10_80527331_80544160_1	chr12	+	1820	7	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	4838	735	4834	-735	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGAAGTGACCCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	80527330	80544160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ENSMUSG00000032705.10_80527387_80544235_1	chr12	+	1839	7	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	4894	660	4890	-660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATTTGTTTGGGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	80527386	80544235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ENSMUSG00000032705.10_80527437_80537621_1	chr12	+	575	4	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	4944	7274	4940	-7274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGGAAAGCTCAGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	80527436	80537621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_80527486_80531019_80531147_80536175_80536508_80537554
ENSMUSG00000032705.10_80531111_80544360_1	chr12	+	1774	6	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	8618	535	8614	-535	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTCCTTTTCTGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	80531110	80544360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ENSMUSG00000032705.10_80531111_80544423_1	chr12	+	1837	6	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	8618	472	8614	-472	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGCTTTGACACATGGC	NA	NA	NA	NA	NA	NA	NA	NA	80531110	80544423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ENSMUSG00000032705.10_80536329_80539475_1	chr12	+	582	4	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	13836	5420	13832	-5420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCTCAGAGGAGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	80536328	80539475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_80536508_80537554_80537662_80537868_80538005_80539315
ENSMUSG00000032705.10_80536329_80544577_1	chr12	+	1802	5	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	13836	318	13832	-318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTGGCCAGGTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	80536328	80544577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ENSMUSG00000032705.10_80536329_80544656_1	chr12	+	1881	5	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	13836	239	13832	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGGGTAATGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	80536328	80544656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ENSMUSG00000032705.10_80536431_80544711_1	chr12	+	1834	5	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	13938	184	13934	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAATTTATTAGCAATTA	NA	NA	NA	NA	NA	NA	NA	NA	80536430	80544711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ENSMUSG00000032705.10_80537552_80544896_1	chr12	+	1945	4	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	15059	-1	15055	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGATTGTAAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	80537551	80544896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_80537662_80537868_80538005_80539315_80539673_80543554
ENSMUSG00000032705.10_80537875_80543657_1	chr12	+	590	3	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	15382	1238	15378	-1238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCCTGGACTCCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	80537874	80543657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_80538005_80539315_80539673_80543554
ENSMUSG00000032712.17_149211226_149229210_1	chr6	+	2610	4	ISM	ENSMUSG00000032712.17	ENSMUST00000100765.11	5356	6	254	7218	254	-7218	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGGAAGCAAACAGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	149211225	149229210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_149211403_149211819_149211876_149226229_149226299_149226902
ENSMUSG00000032712.17_149226262_149229429_1	chr6	+	2564	2	ISM	ENSMUSG00000032712.17	ENSMUST00000100765.11	5356	6	15290	6999	-694	-6999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTAAAAGAGTTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	149226261	149229429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_149226299_149226902
ENSMUSG00000032714.7_78420441_78422021_1	chr10	-	1403	2	ISM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	5777	104	5777	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAAATCTTCCAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	78422021	78420440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_78421746_78421923
ENSMUSG00000032714.7_78420838_78423225_1	chr10	-	1356	4	ISM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	4573	501	4573	-501	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGGATTCTACTTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	78423225	78420837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164
ENSMUSG00000032714.7_78421022_78424665_1	chr10	-	1363	5	ISM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	3133	685	3133	-685	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGTTCTGCTTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	78424665	78421021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78423292_78424540
ENSMUSG00000032714.7_78421186_78425012_1	chr10	-	1367	6	ISM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	2786	849	2786	-849	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGCTAGGGAGTTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	78425012	78421185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78423292_78424540_78424756_78424934
ENSMUSG00000032714.7_78421260_78425083_1	chr10	-	1364	6	ISM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	2715	923	2715	-923	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTGGGTTCCAAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	78425083	78421259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78423292_78424540_78424756_78424934
ENSMUSG00000032714.7_78421655_78425465_1	chr10	-	1351	6	ISM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	2333	1318	2333	-1318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAAGTGGTGACTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	78425465	78421654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78423292_78424540_78424756_78424934
ENSMUSG00000032714.7_78421998_78425806_1	chr10	-	1371	6	ISM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	1992	1661	1992	-1661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGAGTCACCAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	78425806	78421997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_78422150_78422792_78422954_78423164_78423292_78424540_78424756_78424934_78425580_78425735
ENSMUSG00000032714.7_78422045_78425874_1	chr10	-	1392	6	ISM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	1924	1708	1924	-1708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCAGCGAGACAAACACC	NA	NA	NA	NA	NA	NA	NA	NA	78425874	78422044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_78422150_78422792_78422954_78423164_78423292_78424540_78424756_78424934_78425580_78425735
ENSMUSG00000032714.7_78422799_78426017_1	chr10	-	1424	5	ISM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	1781	2462	1781	-2462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGGTGAGTCGGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	78426017	78422798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_78422954_78423164_78423292_78424540_78424756_78424934_78425580_78425735
ENSMUSG00000032714.7_78423201_78427798_1	chr10	-	1456	5	ISM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	0	2864	0	-2864	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGATGTGTACCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	78427798	78423200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_78423292_78424540_78424756_78424934_78425580_78425735_78426078_78427635
ENSMUSG00000032715.10_152179342_152181836_1	chr2	-	1468	2	ISM	ENSMUSG00000032715.10	ENSMUST00000040312.7	2026	4	4116	0	4116	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	152181836	152179341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_152180608_152181634
ENSMUSG00000032715.10_152179342_152181929_1	chr2	-	1561	2	ISM	ENSMUSG00000032715.10	ENSMUST00000040312.7	2026	4	4023	0	4023	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	152181929	152179341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_152180608_152181634
ENSMUSG00000032715.10_152179582_152185067_1	chr2	-	1430	3	ISM	ENSMUSG00000032715.10	ENSMUST00000040312.7	2026	4	885	240	885	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAATAGTCTGGAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	152185067	152179581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_152180608_152181634_152181928_152184956
ENSMUSG00000032715.10_152179774_152185890_1	chr2	-	1532	4	FSM	ENSMUSG00000032715.10	ENSMUST00000040312.7	2026	4	62	432	62	-432	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTTGTGCCTTTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	152185890	152179773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152180608_152181634_152181928_152184956_152185248_152185776
ENSMUSG00000032715.10_152179844_152185890_1	chr2	-	1462	4	FSM	ENSMUSG00000032715.10	ENSMUST00000040312.7	2026	4	62	502	62	-502	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTACCGGGGCTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	152185890	152179843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152180608_152181634_152181928_152184956_152185248_152185776
ENSMUSG00000032725.11_101489455_101493047_1	chr7	-	641	4	NNC	ENSMUSG00000032725.11	novel	629	4	NA	NA	0	17	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGCCCCATGCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	101493047	101489454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_101489606_101489797_101489934_101490018_101490200_101492874
ENSMUSG00000032725.11_101489455_101493047_2	chr7	-	646	4	FSM	ENSMUSG00000032725.11	ENST00000449475.6	629	4	0	-17	0	17	multi-exon	FALSE	canonical	NA	NA	NA	NA	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGCCCCATGCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	101493047	101489454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_101489606_101489797_101489934_101490018_101490205_101492874
ENSMUSG00000032725.11_101489455_101493047_3	chr7	-	637	4	NNC	ENSMUSG00000032725.11	novel	629	4	NA	NA	0	17	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGCCCCATGCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	101493047	101489454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_101489606_101489797_101489925_101490018_101490205_101492874
ENSMUSG00000032727.15_111827810_111851289_1	chr13	+	1196	11	ISM	ENSMUSG00000032727.15	ENSMUST00000109272.9	5279	13	5098	3841	4925	-2881	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCAACACGCCTCGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	111827809	111851289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ENSMUSG00000032727.15_111827874_111851333_1	chr13	+	1176	11	ISM	ENSMUSG00000032727.15	ENSMUST00000109272.9	5279	13	5162	3797	4989	-2837	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGAAGAGTTACTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	111827873	111851333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ENSMUSG00000032727.15_111840255_111851468_1	chr13	+	1177	10	ISM	ENSMUSG00000032727.15	ENSMUST00000109272.9	5279	13	17543	3662	17370	-2702	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTGCTGTCCCCGAATC	NA	NA	NA	NA	NA	NA	NA	NA	111840254	111851468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ENSMUSG00000032727.15_111844780_111851828_1	chr13	+	1179	6	ISM	ENSMUSG00000032727.15	ENSMUST00000109272.9	5279	13	22068	3302	21895	-2342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATTTTCATTTTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	111844779	111851828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ENSMUSG00000032727.15_111850846_111852229_1	chr13	+	1212	3	ISM	ENSMUSG00000032727.15	ENSMUST00000047412.11	4243	13	27961	1941	27961	-1941	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACAGAAACTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	111850845	111852229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_111850903_111850978_111851122_111851217
ENSMUSG00000032735.16_61934360_61944445_1	chr18	-	424	6	NNC	ENSMUSG00000032735.16	novel	1069	8	NA	NA	3272	-3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	396	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCTATACATATAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	61944445	61934359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_61934480_61938136_61938218_61939447_61939519_61941451_61941510_61942002_61942033_61944381
ENSMUSG00000032735.16_61934399_61944484_1	chr18	-	425	6	ISM	ENSMUSG00000032735.16	ENST00000517451.5	1069	8	3233	85	3233	-42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACGAACTGAAGAAGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	61944484	61934398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61934480_61938136_61938218_61939447_61939519_61941450_61941510_61942002_61942033_61944381
ENSMUSG00000032735.16_61934428_61944507_1	chr18	-	409	5	NNC	ENSMUSG00000032735.16	novel	1069	8	NA	NA	3210	-71	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCGAGAGGCTAGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	61944507	61934427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_61934480_61938136_61938218_61939447_61939519_61941450_61941530_61944381
ENSMUSG00000032735.16_61938137_61946679_1	chr18	-	446	5	NNC	ENSMUSG00000032735.16	novel	1069	8	NA	NA	1038	-3780	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTACAAACATGTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	61946679	61938136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_61938218_61939447_61939519_61941450_61941530_61944381_61944530_61946612
ENSMUSG00000032735.16_61939467_61947364_1	chr18	-	450	6	ISM	ENSMUSG00000032735.16	ENST00000517451.5	1069	8	353	5153	353	-5110	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGCGAGGTGAGCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	61947364	61939466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61939519_61941450_61941510_61942002_61942033_61944381_61944530_61946612_61946678_61947268
ENSMUSG00000032735.16_61939479_61947358_1	chr18	-	422	5	NNC	ENSMUSG00000032735.16	novel	1069	8	NA	NA	359	-5122	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCAACTGGGGCATGCGA	NA	NA	NA	NA	NA	NA	NA	NA	61947358	61939478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_61939519_61941450_61941530_61944381_61944530_61946612_61946678_61947268
ENSMUSG00000032735.16_61944432_61947529_1	chr18	-	424	3	ISM	ENSMUSG00000032735.16	ENST00000517451.5	1069	8	188	10118	188	-10075	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCGGGAGGCCCTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	61947529	61944431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61944530_61946612_61946678_61947268
ENSMUSG00000032735.16_61944458_61978926_1	chr18	-	918	11	ISM	ENSMUSG00000032735.16	ENST00000508983.5	2010	21	65435	10101	-31209	-10101	internal_fragment	TRUE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCCCTCCACGGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	61978926	61944457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61944530_61946612_61946678_61947268_61947404_61949992_61950041_61952861_61952989_61953437_61953468_61954943_61955100_61956937_61957010_61959571_61959631_61972760_61972849_61978860
ENSMUSG00000032735.16_61944479_61947586_1	chr18	-	434	3	ISM	ENSMUSG00000032735.16	ENST00000517451.5	1069	8	131	10165	131	-10122	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGCTCCTATGCGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	61947586	61944478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61944530_61946612_61946678_61947268
ENSMUSG00000032735.16_61946663_61947710_1	chr18	-	457	2	ISM	ENSMUSG00000032735.16	ENST00000517451.5	1069	8	7	12349	7	-12306	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTCATCTGGAGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	61947710	61946662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61946678_61947268
ENSMUSG00000032735.16_61952902_61990168_1	chr18	-	922	10	ISM	ENSMUSG00000032735.16	ENST00000508983.5	2010	21	54193	18545	-42451	-18545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCACCTTCTCCCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	61990168	61952901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61952989_61953437_61953468_61954943_61955100_61956937_61957010_61959571_61959631_61972760_61972849_61978860_61978955_61982368_61982496_61988273_61988387_61990072
ENSMUSG00000032735.16_61955013_62004720_1	chr18	-	908	9	ISM	ENSMUSG00000032735.16	ENST00000508983.5	2010	21	39641	20656	39641	-20656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTCCTACGAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	62004720	61955012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61955100_61956937_61957010_61959571_61959631_61972760_61972849_61978860_61978955_61982368_61982496_61988273_61988387_61990072_61990257_62004636
ENSMUSG00000032735.16_61955064_62004774_1	chr18	-	911	9	ISM	ENSMUSG00000032735.16	ENST00000508983.5	2010	21	39587	20707	39587	-20707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCAGCTCTCCCCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	62004774	61955063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61955100_61956937_61957010_61959571_61959631_61972760_61972849_61978860_61978955_61982368_61982496_61988273_61988387_61990072_61990257_62004636
ENSMUSG00000032740.18_29324057_29413865_1	chr11	+	2693	15	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	-291	40940	76	40454	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACTGAAAATATCTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	29324056	29413865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119
ENSMUSG00000032740.18_29324348_29414048_1	chr11	+	2585	15	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	0	40757	0	40637	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAGAAAACAAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	29324347	29414048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119
ENSMUSG00000032740.18_29324348_29414104_1	chr11	+	2641	15	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	0	40701	0	40693	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCGTCTAAAAGAATTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	29324347	29414104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119
ENSMUSG00000032740.18_29374793_29427328_1	chr11	+	2668	14	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	50445	27477	50445	-27477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGAAGAAAGGATGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	29374792	29427328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293
ENSMUSG00000032740.18_29380180_29430554_1	chr11	+	2673	13	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	55832	24251	55832	-24251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTTGCAGGCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	29380179	29430554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489
ENSMUSG00000032740.18_29397991_29432157_1	chr11	+	2651	13	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	73643	22648	73643	-22648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACAGCTTCTAATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	29397990	29432157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108
ENSMUSG00000032740.18_29398035_29432228_1	chr11	+	2678	13	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	73687	22577	73687	-22577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATCTCTGTATGATGC	NA	NA	NA	NA	NA	NA	NA	NA	29398034	29432228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108
ENSMUSG00000032740.18_29405466_29435890_1	chr11	+	2675	12	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	81118	18915	81118	-18915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGTGTTCTAAATAATT	NA	NA	NA	NA	NA	NA	NA	NA	29405465	29435890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824
ENSMUSG00000032740.18_29406496_29436011_1	chr11	+	2707	11	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	82148	18794	82148	-18794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGTCAACAGACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	29406495	29436011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824
ENSMUSG00000032740.18_29410847_29439727_1	chr11	+	2748	11	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	86499	15078	86499	-15078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTACCAAATAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	29410846	29439727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581
ENSMUSG00000032740.18_29411772_29443959_1	chr11	+	2674	12	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	87424	10846	87424	-10846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTAACACCCACCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	29411771	29443959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878
ENSMUSG00000032740.18_29413320_29448457_1	chr11	+	2664	13	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	88972	6348	88972	-6348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAGTACTGAAAATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	29413319	29448457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408
ENSMUSG00000032740.18_29413381_29448518_1	chr11	+	2664	13	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	89033	6287	89033	-6287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGAGCTATGGCCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	29413380	29448518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408
ENSMUSG00000032740.18_29413431_29448571_1	chr11	+	2667	13	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	89083	6234	89083	-6234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCAGCCTTCCGATCCA	NA	NA	NA	NA	NA	NA	NA	NA	29413430	29448571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408
ENSMUSG00000032740.18_29413569_29451056_1	chr11	+	2723	15	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	89221	3749	89221	-3749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGCTGTAGGTACATTTA	NA	NA	NA	NA	NA	NA	NA	NA	29413568	29451056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975
ENSMUSG00000032740.18_29413888_29453898_1	chr11	+	2720	17	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	89540	907	89540	-907	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTGTCTTCCGACT	NA	NA	NA	NA	NA	NA	NA	NA	29413887	29453898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851
ENSMUSG00000032740.18_29414001_29453956_1	chr11	+	2665	17	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	89653	849	89653	-849	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTCAGTAAGTGGAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	29414000	29453956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851
ENSMUSG00000032740.18_29414065_29454106_1	chr11	+	2751	17	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	89717	699	89717	-699	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGTAAAAGAAACCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	29414064	29454106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851
ENSMUSG00000032740.18_29420354_29457180_1	chr11	+	2719	16	ISM	ENSMUSG00000032740.18	ENST00000642200.1	6523	33	96373	3625	96006	2375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCTAATTCAGTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	29420353	29457180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124
ENSMUSG00000032740.18_29427365_29457796_1	chr11	+	2690	16	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	103384	3015	103017	2991	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATCCCTTCGTGATTAG	NA	NA	NA	NA	NA	NA	NA	NA	29427364	29457796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29427431_29457842_1	chr11	+	2670	16	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	103450	2969	103083	-2963	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCTTGAATCAAGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	29427430	29457842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29430579_29457988_1	chr11	+	2699	15	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	106598	2823	106231	-2817	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTACTTCTTTCAACATT	NA	NA	NA	NA	NA	NA	NA	NA	29430578	29457988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29432228_29458155_1	chr11	+	2674	14	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	108247	2656	107880	-2650	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCAGCCTTTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	29432227	29458155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29432280_29458212_1	chr11	+	2679	14	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	108299	2599	107932	-2593	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTTCTAGAGCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	29432279	29458212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29432632_29458358_1	chr11	+	2684	13	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	108651	2453	108284	-2447	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAATGGATCCAAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	29432631	29458358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29432698_29458410_1	chr11	+	2670	13	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	108717	2401	108350	-2395	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTTCCAGCAAATAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	29432697	29458410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29435979_29458529_1	chr11	+	2591	12	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	111998	2282	111631	-2276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTCTTATGGCAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	29435978	29458529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29435979_29458588_1	chr11	+	2650	12	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	111998	2223	111631	-2217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTACTATTACGGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	29435978	29458588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29439605_29458691_1	chr11	+	2697	11	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	115624	2120	115257	-2114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTATGTGTTTGTTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	29439604	29458691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29443930_29458983_1	chr11	+	2722	9	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	119949	1828	119582	-1822	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTGCTTTACAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	29443929	29458983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29444036_29459038_1	chr11	+	2671	9	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	120055	1773	119688	-1767	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTTTGCACCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	29444035	29459038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29448450_29459232_1	chr11	+	2682	7	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	124469	1579	124102	-1573	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTATAAAATTAAATTACTT	NA	NA	NA	NA	NA	NA	NA	NA	29448449	29459232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29448513_29459280_1	chr11	+	2667	7	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	124532	1531	124165	-1525	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAAATACTAAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	29448512	29459280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29453397_29459566_1	chr11	+	2686	4	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	129416	1245	129049	-1239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGACAGTTAATGAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	29453396	29459566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29453458_29459609_1	chr11	+	2668	4	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	129477	1202	129110	-1196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGTTTGAACCTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	29453457	29459609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29453535_29459689_1	chr11	+	2671	4	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	129554	1122	129187	-1116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAGAAAAAAAGAGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	29453534	29459689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29453948_29459905_1	chr11	+	2674	3	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	129967	906	129600	-900	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGCTATTCCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	29453947	29459905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29454115_29460662_1	chr11	+	653	3	ISM	ENSMUSG00000032740.18	ENST00000642200.1	6523	33	130134	143	129767	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTCACAGGAGTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	29454114	29460662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29454312_29457124_29457224_29460305
ENSMUSG00000032740.18_29454131_29460063_1	chr11	+	2649	3	ISM	ENSMUSG00000032740.18	ENST00000413716.7	8912	34	130150	742	129783	-742	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAGCACCTTTCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	29454130	29460063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_29457157_29460291_1	chr11	+	2664	2	ISM	ENSMUSG00000032740.18	ENST00000413716.7	8912	34	133176	514	132809	-514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTCTTTTCAGCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	29457156	29460291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_29457224_29457694
ENSMUSG00000032741.10_120674069_120685558_1	chr5	-	1258	14	ISM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	41180	1851	41180	-80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATTTACACAGAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	120685558	120674068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513
ENSMUSG00000032741.10_120674223_120687646_1	chr5	-	1308	17	ISM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	39092	2005	39092	-234	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCAGCAGCCCCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	120687646	120674222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555
ENSMUSG00000032741.10_120675970_120691566_1	chr5	-	1277	17	ISM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	35172	3752	35172	-1981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCCGTCCTGGAGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	120691566	120675969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507
ENSMUSG00000032741.10_120678700_120694038_1	chr5	-	1298	17	ISM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	32700	6482	32700	-4711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAGGTAGAGGAAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	120694038	120678699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932
ENSMUSG00000032741.10_120681455_120695932_1	chr5	-	1273	16	ISM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	30806	9237	30806	-7466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTCTATTTCATTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	120695932	120681454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834
ENSMUSG00000032741.10_120685523_120723304_1	chr5	-	1279	14	ISM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	3434	13305	3434	-11534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCATGTGTAAGTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	120723304	120685522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249
ENSMUSG00000032745.19_111562214_111574658_1	chr13	-	1431	4	ISM	ENSMUSG00000032745.19	ENST00000514387.6	3285	11	51756	2	51756	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTCTTTGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	111574658	111562213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490
ENSMUSG00000032745.19_111562466_111575778_1	chr13	-	1320	5	ISM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	50784	0	50636	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTTTCCAAACAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	111575778	111562465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637
ENSMUSG00000032745.19_111562578_111577316_1	chr13	-	1359	6	ISM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	49246	112	49098	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCACTCCCCCTAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	111577316	111562577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165
ENSMUSG00000032745.19_111562692_111589623_1	chr13	-	1412	8	ISM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	36939	226	36791	-226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	111589623	111562691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557
ENSMUSG00000032745.19_111562837_111589700_1	chr13	-	1344	8	ISM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	36862	371	36714	-371	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAATGTTGTAGAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	111589700	111562836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557
ENSMUSG00000032745.19_111562881_111589765_1	chr13	-	1365	8	ISM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	36797	415	36649	-415	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAATGTTGTGTTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	111589765	111562880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557
ENSMUSG00000032745.19_111563050_111624005_1	chr13	-	1385	10	ISM	ENSMUSG00000032745.19	ENST00000514387.6	3285	11	2409	838	2409	-584	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCGGATGATGACGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	111624005	111563049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111623956
ENSMUSG00000032745.19_111563120_111624041_1	chr13	-	1351	10	ISM	ENSMUSG00000032745.19	ENST00000514387.6	3285	11	2373	908	2373	-654	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCCTGGAAAAACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	111624041	111563119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111623956
ENSMUSG00000032745.19_111563160_111624114_1	chr13	-	1384	10	ISM	ENSMUSG00000032745.19	ENST00000514387.6	3285	11	2300	948	2300	-694	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATTTTGAAAAATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	111624114	111563159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111623956
ENSMUSG00000032745.19_111572927_111624246_1	chr13	-	1391	8	ISM	ENSMUSG00000032745.19	ENST00000514387.6	3285	11	2168	10715	2168	-10461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTATTTTTACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	111624246	111572926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111623956
ENSMUSG00000032745.19_111573033_111624246_1	chr13	-	1285	8	ISM	ENSMUSG00000032745.19	ENST00000514387.6	3285	11	2168	10821	2168	-10567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGAGAACGGCAATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	111624246	111573032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111623956
ENSMUSG00000032745.19_111574490_111624468_1	chr13	-	1422	7	ISM	ENSMUSG00000032745.19	ENST00000514387.6	3285	11	1946	12278	1946	-12024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGAAATTGCAGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	111624468	111574489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111623956
ENSMUSG00000032745.19_111574605_111624534_1	chr13	-	1373	7	ISM	ENSMUSG00000032745.19	ENST00000514387.6	3285	11	1880	12393	1880	-12139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACTAAACTGACACGAAT	NA	NA	NA	NA	NA	NA	NA	NA	111624534	111574604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111623956
ENSMUSG00000032745.19_111577206_111624089_1	chr13	-	813	6	ISM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	2473	14740	2325	-14740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGCTTAGTCCCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	111624089	111577205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956
ENSMUSG00000032745.19_111577276_111624906_1	chr13	-	1440	5	ISM	ENSMUSG00000032745.19	ENST00000514387.6	3285	11	1508	15064	1508	-14810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGGATTCCCAGTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	111624906	111577275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111623956
ENSMUSG00000032745.19_111585518_111626284_1	chr13	-	1345	5	ISM	ENSMUSG00000032745.19	ENST00000514387.6	3285	11	130	23306	130	-23052	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATGAGAGAGAACCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	111626284	111585517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111585534_111589557_111589782_111589906_111590031_111623956_111624905_111626251
ENSMUSG00000032745.19_111589601_111626339_1	chr13	-	1341	4	ISM	ENSMUSG00000032745.19	ENST00000514387.6	3285	11	75	27389	75	-27135	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGACAAAAGAGAACGCA	NA	NA	NA	NA	NA	NA	NA	NA	111626339	111589600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111589782_111589906_111590031_111623956_111624905_111626251
ENSMUSG00000032745.19_111589649_111626393_1	chr13	-	1347	4	ISM	ENSMUSG00000032745.19	ENST00000514387.6	3285	11	21	27437	21	-27183	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAGGACTACATGAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	111626393	111589648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111589782_111589906_111590031_111623956_111624905_111626251
ENSMUSG00000032745.19_111589945_111624547_1	chr13	-	797	3	ISM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	2015	27479	1867	-27479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGCTTTGATTCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	111624547	111589944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_111590031_111603384_111603505_111623956
ENSMUSG00000032754.15_120659128_120671614_1	chr5	+	1480	8	ISM	ENSMUSG00000032754.15	ENSMUST00000076051.12	2661	14	9811	471	7920	-470	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATCTAAACACTTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	120659127	120671614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120670924
ENSMUSG00000032754.15_120663763_120672084_1	chr5	+	1539	4	ISM	ENSMUSG00000032754.15	ENSMUST00000076051.12	2661	14	14446	1	12555	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTACCAGAAGAGTCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	120663762	120672084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_120663866_120665805_120665928_120667574_120667729_120670924
ENSMUSG00000032763.12_78410421_78416998_1	chr10	+	1249	10	ISM	ENSMUSG00000032763.12	ENSMUST00000105384.5	2329	16	87	3338	0	-595	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGCCTCAGGAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	78410420	78416998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_78410500_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889
ENSMUSG00000032763.12_78410857_78419817_1	chr10	+	1794	14	FSM	ENSMUSG00000032763.12	ENSMUST00000218215.2	2331	14	28	509	0	-496	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGTCATGGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78410856	78419817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711
ENSMUSG00000032763.12_78411008_78419940_1	chr10	+	1680	15	FSM	ENSMUSG00000032763.12	ENSMUST00000218885.2	2233	15	180	373	151	-373	multi-exon	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGATACTCTCACGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	78411007	78419940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
ENSMUSG00000032763.12_78412520_78420111_1	chr10	+	1689	14	ISM	ENSMUSG00000032763.12	ENSMUST00000218885.2	2233	15	1692	202	1663	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGACCAGGACTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	78412519	78420111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
ENSMUSG00000032763.12_78412942_78420314_1	chr10	+	1669	12	ISM	ENSMUSG00000032763.12	ENSMUST00000218885.2	2233	15	2114	-1	2085	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAAGGACTCAGTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	78412941	78420314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
ENSMUSG00000032776.10_71732845_71739994_1	chr7	-	164	2	ISM	ENSMUSG00000032776.10	ENST00000451018.7	2409	19	169317	12	169317	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCAGAAGGTATGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	71739994	71732844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_71732933_71739918
ENSMUSG00000032776.10_71833587_71835598_1	chr7	-	157	2	ISM	ENSMUSG00000032776.10	ENST00000451018.7	2409	19	73713	100754	73713	27768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTGGAAAAGTCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	71835598	71833586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_71833656_71835510
ENSMUSG00000032776.10_71861355_71879108_1	chr7	-	477	6	ISM	ENSMUSG00000032776.10	ENST00000543482.5	1355	10	77169	0	30203	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGACTGGGCACGTGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	71879108	71861354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_71861409_71863691_71863857_71873768_71873805_71877727_71877840_71878219_71878297_71879075
ENSMUSG00000032776.10_71861413_71863793_1	chr7	-	163	2	ISM	ENSMUSG00000032776.10	ENST00000451018.7	2409	19	45518	128580	45518	-58	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGATGGGCATTTTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	71863793	71861412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_71861474_71863691
ENSMUSG00000032776.10_71863821_71895249_1	chr7	-	445	6	ISM	ENSMUSG00000032776.10	ENST00000543482.5	1355	10	61028	2466	14062	-2466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCGGAAGAACCAACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	71895249	71863820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_71863857_71873768_71873805_71877727_71877840_71878219_71878297_71879075_71879219_71895208
ENSMUSG00000032776.10_71877807_71908906_1	chr7	-	485	6	ISM	ENSMUSG00000032776.10	ENSMUST00000079323.8	5802	23	47450	150229	405	-16452	internal_fragment	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGTTTAGAAGACGACA	NA	NA	NA	NA	NA	NA	NA	NA	71908906	71877806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_71877840_71878219_71878297_71879075_71879219_71895208_71895318_71896855_71896919_71908846
ENSMUSG00000032783.10_98972456_98975487_1	chr15	+	1068	5	ISM	ENSMUSG00000032783.10	ENSMUST00000230054.2	2639	14	0	5803	0	-5797	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGGAGGGCCCGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	98972455	98975487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_98972949_98973230_98973380_98973488_98973679_98975168_98975327_98975409
ENSMUSG00000032788.16_78276387_78300687_1	chr10	-	1109	10	FSM	ENSMUSG00000032788.16	ENST00000468090.5	1109	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCCTCATGTTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	78300687	78276386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78287312_78287418_78289307_78289363_78300594
ENSMUSG00000032803.16_103232416_103233599_1	chr9	-	934	2	ISM	ENSMUSG00000032803.16	ENSMUST00000116517.9	3741	5	8497	2113	8497	733	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGTATGCTGTGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	103233599	103232415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_103233229_103233478
ENSMUSG00000032803.16_103232812_103241815_1	chr9	-	951	5	FSM	ENSMUSG00000032803.16	ENSMUST00000116517.9	3741	5	281	2509	281	337	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTTAGAAGGAATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	103241815	103232811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103241661
ENSMUSG00000032806.14_73412823_73416824_1	chrX	-	1892	3	FSM	ENSMUSG00000032806.14	ENSMUST00000037967.6	2023	3	131	0	28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCTCGGGTCCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	73416824	73412822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_73414618_73416219_73416289_73416796
ENSMUSG00000032806.14_73412973_73416955_1	chrX	-	1873	3	FSM	ENSMUSG00000032806.14	ENSMUST00000037967.6	2023	3	0	150	0	-150	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATGCACTATGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	73416955	73412972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_73414618_73416219_73416289_73416796
ENSMUSG00000032834.12_78014803_78017456_1	chr10	-	686	5	ISM	ENSMUSG00000032834.12	ENSMUST00000042556.11	3872	21	3527	8060	3527	-8060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCAAGGTGAGCACCGGG	NA	NA	NA	NA	NA	NA	NA	NA	78017456	78014802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344
ENSMUSG00000032840.8_118383416_118400289_1	chr5	+	1656	5	FSM	ENSMUSG00000032840.8	ENSMUST00000049138.8	5649	5	124	3869	124	-3869	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGGTTGACCTGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	118383415	118400289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164
ENSMUSG00000032841.16_101547714_101602507_2	chr2	-	552	7	FSM	ENSMUSG00000032841.16	ENST00000527487.1	695	7	143	0	143	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCTAACAGAACAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	101602507	101547713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_101547812_101564949_101565091_101571631_101571724_101577070_101577129_101588854_101588904_101601279_101601361_101602474
ENSMUSG00000032841.16_101547714_101602608_1	chr2	-	647	7	NNC	ENSMUSG00000032841.16	novel	695	7	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCTAACAGAACAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	101602608	101547713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_101547812_101564949_101565091_101571631_101571724_101577076_101577129_101588854_101588904_101601279_101601361_101602474
ENSMUSG00000032841.16_101547714_101602608_2	chr2	-	653	7	FSM	ENSMUSG00000032841.16	ENST00000527487.1	695	7	42	0	42	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCTAACAGAACAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	101602608	101547713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_101547812_101564949_101565091_101571631_101571724_101577070_101577129_101588854_101588904_101601279_101601361_101602474
ENSMUSG00000032849.15_118738236_118763703_1	chr14	-	383	4	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	179820	16491	179820	-16491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTGGATCCAATTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	118763703	118738235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118738293_118745004_118745095_118753844_118754001_118763623
ENSMUSG00000032849.15_118763737_118767377_1	chr14	-	399	4	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	176146	41992	176146	-41992	internal_fragment	TRUE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTGGCCCCACGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	118767377	118763736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118763816_118765362_118765464_118766378_118766490_118767269
ENSMUSG00000032849.15_118765406_118771482_1	chr14	-	368	4	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	172041	43661	172041	-43661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGTGGTCTGTGCGAC	NA	NA	NA	NA	NA	NA	NA	NA	118771482	118765405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118765464_118766378_118766490_118767269_118767390_118771403
ENSMUSG00000032849.15_118767289_118832214_1	chr14	-	373	4	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	111309	45544	111309	-45544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGGACTTGCATTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	118832214	118767288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118767390_118771403_118771555_118790695_118790776_118832173
ENSMUSG00000032849.15_118771449_118834163_1	chr14	-	405	4	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	109360	49704	109360	-49704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTAGAGACGTCACGG	NA	NA	NA	NA	NA	NA	NA	NA	118834163	118771448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118771555_118790695_118790776_118832173_118832321_118834091
ENSMUSG00000032849.15_118790739_118836771_1	chr14	-	363	5	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	106752	68994	106752	-68994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGATGATTTGCTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	118836771	118790738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118836725
ENSMUSG00000032849.15_118832265_118836918_1	chr14	-	382	4	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	106605	110520	106605	-110520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTGTGAACGCTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	118836918	118832264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118832321_118834091_118834187_118834550_118834589_118836725
ENSMUSG00000032849.15_118834122_118841626_1	chr14	-	371	4	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	101897	112377	101897	-112377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAGCTGGTACTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	118841626	118834121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118834187_118834550_118834589_118836725_118836936_118841568
ENSMUSG00000032849.15_118836873_118852598_1	chr14	-	398	5	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	90925	115128	90925	-115128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGTTAAAGAAAGAAAACGA	NA	NA	NA	NA	NA	NA	NA	NA	118852598	118836872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542
ENSMUSG00000032849.15_118852576_118864897_1	chr14	-	385	4	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	78626	130831	78626	-130831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGTGATCAAGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	118864897	118852575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118852735_118853777_118853868_118856300_118856403_118864863
ENSMUSG00000032849.15_118864912_118868475_1	chr14	-	413	3	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	75048	143167	75048	-143167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTGAGAGAGGGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	118868475	118864911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118865114_118867029_118867156_118868390
ENSMUSG00000032849.15_118865078_118869556_1	chr14	-	373	4	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	73967	143333	73967	-143333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGGATGAACATGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	118869556	118865077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118865114_118867029_118867156_118868390_118868555_118869509
ENSMUSG00000032849.15_118867112_118891611_1	chr14	-	348	4	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	51912	145367	51912	-145367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGTCATAACAGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	118891611	118867111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118867156_118868390_118868555_118869509_118869600_118891561
ENSMUSG00000032849.15_118891702_118943503_1	chr14	-	376	4	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	20	169957	20	-169957	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATACAGCTTATGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	118943503	118891701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_118891784_118905752_118905880_118906408_118906520_118943447
ENSMUSG00000032855.7_24796551_24797220_1	chr17	+	517	3	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	55	8346	55	-8346	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGAGCCTAGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	24796550	24797220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24796637_24796723_24797004_24797069
ENSMUSG00000032855.7_24796604_24797275_1	chr17	+	519	3	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	108	8291	108	-8291	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAACAGGTGAGCTTAACC	NA	NA	NA	NA	NA	NA	NA	NA	24796603	24797275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24796637_24796723_24797004_24797069
ENSMUSG00000032855.7_24796814_24797479_1	chr17	+	531	3	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	318	8087	318	-8087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTTTAGCCCTCATTAC	NA	NA	NA	NA	NA	NA	NA	NA	24796813	24797479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24797004_24797069_24797284_24797352
ENSMUSG00000032855.7_24796869_24797800_1	chr17	+	525	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	373	7766	373	-7766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGAGCCCAACGTT	NA	NA	NA	NA	NA	NA	NA	NA	24796868	24797800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24797004_24797069_24797284_24797352_24797513_24797784
ENSMUSG00000032855.7_24797000_24797899_1	chr17	+	493	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	504	7667	504	-7667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCAGATTACTGCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	24796999	24797899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24797004_24797069_24797284_24797352_24797513_24797784
ENSMUSG00000032855.7_24797124_24798744_1	chr17	+	520	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	628	6822	628	-6822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGGAGGGCATGATGC	NA	NA	NA	NA	NA	NA	NA	NA	24797123	24798744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24797284_24797352_24797513_24797784_24797935_24798694
ENSMUSG00000032855.7_24797184_24798793_1	chr17	+	509	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	688	6773	688	-6773	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGACACCCACCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	24797183	24798793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24797284_24797352_24797513_24797784_24797935_24798694
ENSMUSG00000032855.7_24797267_24798979_1	chr17	+	523	5	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	771	6587	771	-6587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGGGTGGAGCCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	24797266	24798979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24797284_24797352_24797513_24797784_24797935_24798694_24798840_24798928
ENSMUSG00000032855.7_24797807_24799198_1	chr17	+	543	3	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	1311	6368	1311	-6368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCAGTGGGGCCCTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	24797806	24799198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24797935_24798694_24798840_24798928
ENSMUSG00000032855.7_24798740_24799409_1	chr17	+	581	2	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	2244	6157	2244	-6157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGCCCAGAGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	24798739	24799409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24798840_24798928
ENSMUSG00000032855.7_24799110_24799923_1	chr17	+	515	2	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	2614	5643	2614	-5643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTCGGCCAGCAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	24799109	24799923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24799550_24799848
ENSMUSG00000032855.7_24799250_24800221_1	chr17	+	514	3	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	2754	5345	2754	-5345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGGAGGTGTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	24799249	24800221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24799550_24799848_24800006_24800164
ENSMUSG00000032855.7_24799305_24800279_1	chr17	+	517	3	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	2809	5287	2809	-5287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGATGTGGAGAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	24799304	24800279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24799550_24799848_24800006_24800164
ENSMUSG00000032855.7_24799421_24800566_1	chr17	+	551	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	2925	5000	2925	-5000	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGACGTGTGTCATATG	NA	NA	NA	NA	NA	NA	NA	NA	24799420	24800566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24799550_24799848_24800006_24800164_24800400_24800536
ENSMUSG00000032855.7_24799470_24800625_1	chr17	+	561	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	2974	4941	2974	-4941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGACCAGCTGGATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	24799469	24800625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24799550_24799848_24800006_24800164_24800400_24800536
ENSMUSG00000032855.7_24799963_24804719_1	chr17	+	543	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	3467	847	3467	-847	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACAGAGCCTTTCATCGA	NA	NA	NA	NA	NA	NA	NA	NA	24799962	24804719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24800006_24800164_24800400_24800536_24800733_24804650
ENSMUSG00000032855.7_24800286_24804921_1	chr17	+	506	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	3790	645	3790	-645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTATCGTCCGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	24800285	24804921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24800400_24800536_24800733_24804650_24804822_24804896
ENSMUSG00000032855.7_24800324_24804994_1	chr17	+	541	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	3828	572	3828	-572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGGCCAACGGGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	24800323	24804994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24800400_24800536_24800733_24804650_24804822_24804896
ENSMUSG00000032855.7_24800554_24805158_1	chr17	+	515	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	4058	408	4058	-408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCGGCTCCTCGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	24800553	24805158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24800733_24804650_24804822_24804896_24805041_24805137
ENSMUSG00000032855.7_24800643_24805281_1	chr17	+	549	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	4147	285	4147	-285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTCTGCCTCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	24800642	24805281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24800733_24804650_24804822_24804896_24805041_24805137
ENSMUSG00000032855.7_24804679_24805457_1	chr17	+	520	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	8183	109	8183	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTCCTGGTGTTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	24804678	24805457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24804822_24804896_24805041_24805137_24805349_24805435
ENSMUSG00000032855.7_24804820_24805521_1	chr17	+	443	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	8324	45	8324	-45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGCTGTCCTGTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	24804819	24805521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24804822_24804896_24805041_24805137_24805349_24805435
ENSMUSG00000032855.7_24804820_24805562_1	chr17	+	484	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	8324	4	8324	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCTGAGTAAGGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	24804819	24805562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24804822_24804896_24805041_24805137_24805349_24805435
ENSMUSG00000032869.16_151559092_151561484_1	chr2	-	1594	2	ISM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	21746	1360	21746	1093	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAACAGTGGCTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	151561484	151559091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_151560606_151561404
ENSMUSG00000032869.16_151559277_151571442_1	chr2	-	1574	4	ISM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	11788	1545	11788	908	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCATTCTGTGCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	151571442	151559276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410
ENSMUSG00000032869.16_151559322_151571502_1	chr2	-	1589	4	ISM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	11728	1590	11728	863	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGAAGGATCCCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	151571502	151559321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410
ENSMUSG00000032869.16_151559389_151571563_1	chr2	-	1583	4	ISM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	11667	1657	11667	796	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGACCAGGGCCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	151571563	151559388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410
ENSMUSG00000032869.16_151559499_151576224_1	chr2	-	1589	5	ISM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	7006	1767	7006	686	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGTACTGTTCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	151576224	151559498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141
ENSMUSG00000032869.16_151559738_151583074_1	chr2	-	1647	7	FSM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	156	2006	156	447	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCTAGGTACTAGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	151583074	151559737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
ENSMUSG00000032872.17_86904140_86924886_1	chr9	+	722	7	NNC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	73	-34941	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAGTCATCAAGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	86904139	86924886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914533_86922431_86922520_86923305_86923364_86924832
ENSMUSG00000032872.17_86904275_86931190_1	chr9	+	705	10	ISM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	208	28637	208	-28637	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCTACAAAAGAAAGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	86904274	86931190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154
ENSMUSG00000032872.17_86908998_86931278_1	chr9	+	754	8	NNC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	4931	-28549	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTACTCTTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	86908997	86931278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_86909154_86911556_86911658_86914432_86914533_86922431_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154
ENSMUSG00000032872.17_86911624_86937932_1	chr9	+	654	9	ISM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	7557	21895	7557	-21895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACCTCAAGCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	86911623	86937932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817
ENSMUSG00000032872.17_86914470_86939279_1	chr9	+	694	9	ISM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	10403	20548	10403	-20548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGCTTTTTGATCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86914469	86939279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194
ENSMUSG00000032872.17_86922484_86941043_1	chr9	+	704	8	ISM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	18417	18784	18417	-18784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTCTATTGGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	86922483	86941043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977
ENSMUSG00000032872.17_86924830_86941504_1	chr9	+	785	7	ISM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	20763	18323	20763	-18323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGCATTGTTAACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	86924829	86941504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417
ENSMUSG00000032872.17_86931188_86948783_1	chr9	+	704	6	ISM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	27121	11044	27121	-11044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTTTGCAAAGAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	86931187	86948783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701
ENSMUSG00000032872.17_86931252_86948832_1	chr9	+	689	6	ISM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	27185	10995	27185	-10995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGACCAACACCATTTACT	NA	NA	NA	NA	NA	NA	NA	NA	86931251	86948832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701
ENSMUSG00000032872.17_86937815_86958897_1	chr9	+	717	6	ISM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	33748	930	33748	-930	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCTGATGATGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	86937814	86958897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ENSMUSG00000032872.17_86937893_86958945_1	chr9	+	687	6	ISM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	33826	882	33826	-882	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTCTTTTATTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	86937892	86958945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ENSMUSG00000032872.17_86937928_86959013_1	chr9	+	720	6	ISM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	33861	814	33861	-814	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAAGGCTTTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	86937927	86959013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ENSMUSG00000032872.17_86939233_86959050_1	chr9	+	688	5	ISM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	35166	777	35166	-777	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGTACAAGTAACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	86939232	86959050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ENSMUSG00000032872.17_86939275_86959115_1	chr9	+	711	5	ISM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	35208	712	35208	-712	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGGTCAGTCATGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	86939274	86959115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ENSMUSG00000032872.17_86940992_86959248_1	chr9	+	757	4	ISM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	36925	579	36925	-579	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTACTTTTTATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	86940991	86959248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86941129_86941417_86941505_86948701_86948867_86958880
ENSMUSG00000032872.17_86941108_86959321_1	chr9	+	714	4	ISM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	37041	506	37041	-506	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTGATGGTGTATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	86941107	86959321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86941129_86941417_86941505_86948701_86948867_86958880
ENSMUSG00000032872.17_86948700_86959434_1	chr9	+	721	2	ISM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	44633	393	44633	-393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGGTGGACGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	86948699	86959434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86948867_86958880
ENSMUSG00000032875.9_100526983_100528243_1	chr7	-	468	4	ISM	ENSMUSG00000032875.9	ENSMUST00000209041.2	4516	21	15654	5641	15654	-5641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACGACTGTGGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	100528243	100526982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_100527064_100527302_100527371_100527700_100527788_100528011
ENSMUSG00000032875.9_100528874_100530508_1	chr7	-	476	4	ISM	ENSMUSG00000032875.9	ENST00000263674.4	7779	21	50783	7538	13389	-7532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCGACGACGCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	100530508	100528873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_100528953_100529139_100529340_100529807_100529882_100530385
ENSMUSG00000032875.9_100530937_100532476_1	chr7	-	483	5	ISM	ENSMUSG00000032875.9	ENSMUST00000209041.2	4516	21	11421	9595	11421	-9595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAAGCTCTCCGAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	100532476	100530936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_100531019_100531426_100531513_100531616_100531727_100531979_100532031_100532322
ENSMUSG00000032875.9_100534968_100578088_1	chr7	-	490	3	ISM	ENSMUSG00000032875.9	ENST00000263674.4	7779	21	3203	13632	3203	-13626	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGCAGTTCCTGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	100578088	100534967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_100535067_100539627_100539706_100577775
ENSMUSG00000032883.16_78635542_78668096_1	chr1	+	1066	4	ISM	ENSMUSG00000032883.16	ENST00000679541.1	3090	14	-8	16647	0	-16522	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGACCACAGCTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	78635541	78668096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78635901_78659309_78659728_78665953_78666132_78667985
ENSMUSG00000032883.16_78635755_78671973_1	chr1	+	1052	6	ISM	ENSMUSG00000032883.16	ENST00000679541.1	3090	14	205	12770	155	-12645	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCACAGGAATTCCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	78635754	78671973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78635901_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912
ENSMUSG00000032883.16_78635755_78683108_1	chr1	+	2111	14	ISM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	155	1576	155	-1510	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATGCTGGCAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	78635754	78683108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950
ENSMUSG00000032883.16_78659380_78684042_1	chr1	+	2043	14	ISM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	23780	642	23780	-576	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGTGACAGATGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	78659379	78684042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ENSMUSG00000032883.16_78659421_78684107_1	chr1	+	2067	14	ISM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	23821	577	23821	-511	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCGGATGTATGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	78659420	78684107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ENSMUSG00000032883.16_78659506_78684141_1	chr1	+	2016	14	ISM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	23906	543	23906	-477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGGTTTGCTACAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	78659505	78684141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ENSMUSG00000032883.16_78665995_78684429_1	chr1	+	2041	13	ISM	ENSMUSG00000032883.16	ENSMUST00000134566.8	2492	14	30395	189	30395	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTTATATGTTCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	78665994	78684429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ENSMUSG00000032883.16_78666024_78684465_1	chr1	+	2048	13	ISM	ENSMUSG00000032883.16	ENSMUST00000134566.8	2492	14	30424	153	30424	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTTAAAGTTTGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	78666023	78684465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ENSMUSG00000032883.16_78666047_78684479_1	chr1	+	2039	13	ISM	ENSMUSG00000032883.16	ENSMUST00000134566.8	2492	14	30447	139	30447	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATGTATAGAAGGATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	78666046	78684479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ENSMUSG00000032883.16_78666096_78684618_1	chr1	+	2129	13	ISM	ENSMUSG00000032883.16	ENSMUST00000134566.8	2492	14	30496	0	30496	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTGTTGCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	78666095	78684618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ENSMUSG00000032883.16_78666101_78679033_1	chr1	+	988	9	ISM	ENSMUSG00000032883.16	ENST00000679541.1	3090	14	30551	5710	30501	-5585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGGCCAAAATGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	78666100	78679033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78678985
ENSMUSG00000032883.16_78669873_78681260_1	chr1	+	975	8	ISM	ENSMUSG00000032883.16	ENST00000679541.1	3090	14	34323	3483	34273	-3358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCAGCTTTGAAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	78669872	78681260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78678985_78679178_78681202
ENSMUSG00000032883.16_78671918_78682965_1	chr1	+	977	8	ISM	ENSMUSG00000032883.16	ENST00000679541.1	3090	14	36368	1778	36318	-1653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGTTTGTTGTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	78671917	78682965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78678985_78679178_78681202_78681318_78682950
ENSMUSG00000032883.16_78671974_78683023_1	chr1	+	979	8	ISM	ENSMUSG00000032883.16	ENST00000679541.1	3090	14	36424	1720	36374	-1595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGGAACTTGGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	78671973	78683023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78678985_78679178_78681202_78681318_78682950
ENSMUSG00000032883.16_78672023_78683081_1	chr1	+	988	8	ISM	ENSMUSG00000032883.16	ENST00000679541.1	3090	14	36473	1662	36423	-1537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTTTCTGAAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	78672022	78683081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78678985_78679178_78681202_78681318_78682950
ENSMUSG00000032883.16_78673849_78684044_1	chr1	+	993	8	ISM	ENSMUSG00000032883.16	ENST00000679541.1	3090	14	38299	699	38249	-574	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGACAGATGCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	78673848	78684044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ENSMUSG00000032883.16_78676752_78684353_1	chr1	+	978	5	ISM	ENSMUSG00000032883.16	ENST00000679541.1	3090	14	41202	390	41152	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGCTTGTCAACAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	78676751	78684353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78676886_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ENSMUSG00000032883.16_78676796_78684412_1	chr1	+	993	5	ISM	ENSMUSG00000032883.16	ENST00000679541.1	3090	14	41246	331	41196	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCAAGTTTTTAAACATG	NA	NA	NA	NA	NA	NA	NA	NA	78676795	78684412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78676886_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ENSMUSG00000032883.16_78676858_78684454_1	chr1	+	973	5	ISM	ENSMUSG00000032883.16	ENST00000679541.1	3090	14	41308	289	41258	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTTTGTAACTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	78676857	78684454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_78676886_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ENSMUSG00000032890.18_120729751_120740353_1	chr4	+	427	3	ISM	ENSMUSG00000032890.18	ENSMUST00000106283.8	6437	8	10777	13423	-5315	-8404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCAGGGCAGCCGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	120729750	120740353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_120729848_120735034_120735283_120740271
ENSMUSG00000032890.18_120735245_120746613_1	chr4	+	454	5	ISM	ENSMUSG00000032890.18	ENSMUST00000171363.2	977	6	179	2144	179	-2144	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGCCAAGAAAACATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	120735244	120746613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_120735283_120740271_120740414_120744130_120744241_120746184_120746287_120746551
ENSMUSG00000032890.18_120740384_120748555_1	chr4	+	446	5	ISM	ENSMUSG00000032890.18	ENSMUST00000171363.2	977	6	5318	202	5318	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGACGAGCTGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	120740383	120748555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
ENSMUSG00000032890.18_120744127_120748559_1	chr4	+	424	4	ISM	ENSMUSG00000032890.18	ENSMUST00000171363.2	977	6	9061	198	9061	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGCTGGACCTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	120744126	120748559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_120744241_120746184_120746287_120746551_120746692_120748491
ENSMUSG00000032892.15_68863973_68864494_1	chr11	-	271	3	ISM	ENSMUSG00000032892.15	ENSMUST00000038644.5	820	5	175	663	175	-663	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAGCAGGTAGCTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	68864494	68863972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68864100_68864266_68864384_68864467
ENSMUSG00000032897.18_120614635_120647686_1	chr4	-	1755	9	FSM	ENSMUSG00000032897.18	ENSMUST00000097906.12	1008	9	-8	-739	-8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	NA	NA	NA	NA	NA	NA	NA	120647686	120614634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573
ENSMUSG00000032897.18_120614635_120647686_2	chr4	-	1750	9	NNC	ENSMUSG00000032897.18	novel	2006	10	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	NA	NA	NA	NA	NA	NA	NA	120647686	120614634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625927_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573
ENSMUSG00000032897.18_120614775_120682881_1	chr4	-	1770	10	FSM	ENSMUSG00000032897.18	ENSMUST00000043429.12	1932	10	22	140	22	-124	multi-exon	FALSE	canonical	NA	NA	NA	NA	2853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTTTGAGAACCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	120682881	120614774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
ENSMUSG00000032897.18_120615151_120616596_1	chr4	-	690	2	ISM	ENSMUSG00000032897.18	ENST00000372652.5	2279	10	56323	500	31082	-75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAATATTTTGAGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	120616596	120615150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120615773_120616528
ENSMUSG00000032897.18_120615151_120638741_1	chr4	-	1013	7	ISM	ENSMUSG00000032897.18	ENST00000427410.6	1377	9	44166	75	8937	-75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAATATTTTGAGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	120638741	120615150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120638668
ENSMUSG00000032897.18_120615254_120616596_1	chr4	-	305	2	ISM	ENSMUSG00000032897.18	ENST00000456393.6	1862	10	66260	603	31082	120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGGTGCACTACTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	120616596	120615253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120615491_120616528
ENSMUSG00000032897.18_120615254_120618933_1	chr4	-	688	3	ISM	ENSMUSG00000032897.18	ENST00000372652.5	2279	10	53986	603	28745	120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGGTGCACTACTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	120618933	120615253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120615773_120616528_120616589_120618824
ENSMUSG00000032897.18_120615254_120638741_1	chr4	-	910	7	ISM	ENSMUSG00000032897.18	ENST00000427410.6	1377	9	44166	178	8937	120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGGTGCACTACTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	120638741	120615253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120638668
ENSMUSG00000032897.18_120615394_120682881_1	chr4	-	1033	9	FSM	ENSMUSG00000032897.18	ENST00000427410.6	1377	9	26	318	22	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGTGACTGGAGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	120682881	120615393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120638668_120638741_120647573_120647687_120682730
ENSMUSG00000032897.18_120615586_120630888_1	chr4	-	708	6	ISM	ENSMUSG00000032897.18	ENST00000372652.5	2279	10	42031	935	16790	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATCTGGGACCCCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	120630888	120615585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120615773_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868
ENSMUSG00000032897.18_120622454_120672700_1	chr4	-	727	7	ISM	ENSMUSG00000032897.18	ENST00000372652.5	2279	10	219	7803	209	-7080	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCAGATCATTACCAACA	NA	NA	NA	NA	NA	NA	NA	NA	120672700	120622453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120672658
ENSMUSG00000032897.18_120626076_120672909_1	chr4	-	667	6	ISM	ENSMUSG00000032897.18	ENST00000372652.5	2279	10	10	11425	0	-10702	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGCGGAGCCTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	120672909	120626075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120672658
ENSMUSG00000032898.10_118115036_118146627_1	chr5	+	2058	12	FSM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	187	1638	187	-1638	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGTCGCTGAGTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	118115035	118146627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
ENSMUSG00000032898.10_118126929_118147173_1	chr5	+	2096	8	ISM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	12080	1092	12080	-1092	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGAGAGTGTTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	118126928	118147173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
ENSMUSG00000032898.10_118128903_118147418_1	chr5	+	2108	6	ISM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	14054	847	14054	-847	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGTAGTGAGCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	118128902	118147418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
ENSMUSG00000032898.10_118132669_118147601_1	chr5	+	2067	5	ISM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	17820	664	17820	-664	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCAGCTGAAAAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	118132668	118147601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
ENSMUSG00000032898.10_118138475_118147903_1	chr5	+	2106	3	ISM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	23626	362	23626	-362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGTAAATAATGTACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	118138474	118147903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_118138594_118140079_118140238_118146074
ENSMUSG00000032905.6_46863521_46870506_1	chr18	-	4164	3	ISM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	4140	310	96	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTCCAAGACAAATGCACC	NA	NA	NA	NA	NA	NA	NA	NA	46870506	46863520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_46867577_46868321_46868385_46870461
ENSMUSG00000032905.6_46863582_46870558_1	chr18	-	4155	3	ISM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	4088	371	44	-371	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTAAGATTGTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	46870558	46863581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_46867577_46868321_46868385_46870461
ENSMUSG00000032905.6_46863703_46874624_1	chr18	-	4251	4	FSM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	22	492	22	-492	multi-exon	FALSE	canonical	NA	NA	NA	NA	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGGGGGTTCCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	46874624	46863702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_46867577_46868321_46868385_46870461_46870599_46874447
ENSMUSG00000032905.6_46863758_46874624_1	chr18	-	4196	4	FSM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	22	547	22	-547	multi-exon	FALSE	canonical	NA	NA	NA	NA	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCAGGTTTTCTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	46874624	46863757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_46867577_46868321_46868385_46870461_46870599_46874447
ENSMUSG00000032905.6_46863819_46874647_1	chr18	-	4158	4	FSM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	-1	608	-1	-608	multi-exon	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCCAAAAAAAAGCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	46874647	46863818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_46867577_46868321_46868385_46870461_46870599_46874447
ENSMUSG00000032905.6_46867085_46867578_1	chr18	-	446	2	ISM	ENSMUSG00000032905.6	ENST00000500945.2	507	3	806	0	806	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCTGTAAAAAATAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	46867578	46867084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_46867106_46867153
ENSMUSG00000032905.6_46867085_46868385_1	chr18	-	508	3	FSM	ENSMUSG00000032905.6	ENST00000500945.2	507	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCTGTAAAAAATAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	46868385	46867084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_46867106_46867153_46867577_46868321
ENSMUSG00000032905.6_46867154_46868385_1	chr18	-	487	2	ISM	ENSMUSG00000032905.6	ENST00000500945.2	507	3	-1	69	-1	-69	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTAGTTTTTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	46868385	46867153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_46867577_46868321
ENSMUSG00000032911.7_56795823_56797403_1	chr9	+	310	2	ISM	ENSMUSG00000032911.7	ENST00000559989.1	1153	4	83	2897	83	-2897	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTACCTGGTGATGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	56795822	56797403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_56796071_56797341
ENSMUSG00000032911.7_56795879_56797455_1	chr9	+	306	2	ISM	ENSMUSG00000032911.7	ENST00000559989.1	1153	4	139	2845	139	-2845	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACCCTGTGCAGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	56795878	56797455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_56796071_56797341
ENSMUSG00000032911.7_56795950_56797509_1	chr9	+	289	2	ISM	ENSMUSG00000032911.7	ENST00000559989.1	1153	4	210	2791	210	-2791	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCACTCTCGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	56795949	56797509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_56796071_56797341
ENSMUSG00000032911.7_56797744_56800203_1	chr9	+	323	3	ISM	ENSMUSG00000032911.7	ENST00000559989.1	1153	4	2004	97	2004	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCTCTACCGGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	56797743	56800203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_56797825_56798273_56798451_56800138
ENSMUSG00000032911.7_56797807_56800253_1	chr9	+	310	3	ISM	ENSMUSG00000032911.7	ENST00000559989.1	1153	4	2067	47	2067	-47	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCAGCAAGGAAGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	56797806	56800253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_56797825_56798273_56798451_56800138
ENSMUSG00000032925.17_123897676_124211076_1	chr14	+	1757	11	FSM	ENSMUSG00000032925.17	ENST00000622834.4	1820	11	63	0	63	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	5152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTGTTATGGGGATA	NA	NA	NA	NA	NA	NA	NA	NA	123897675	124211076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_123897828_123898772_123898921_124065163_124065311_124077974_124078098_124081208_124081350_124083850_124083992_124094844_124094996_124191986_124192100_124204042_124204190_124209529_124209644_124210696
ENSMUSG00000032925.17_123897684_124065190_1	chr14	+	380	3	ISM	ENSMUSG00000032925.17	ENST00000376180.8	1881	11	71	145886	71	-145886	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGTGATGTGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	123897683	124065190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_123897819_123898702_123898921_124065163
ENSMUSG00000032925.17_123897733_124065242_1	chr14	+	383	3	ISM	ENSMUSG00000032925.17	ENST00000376180.8	1881	11	120	145834	120	-145834	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACCTGACCAAAAAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	123897732	124065242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_123897819_123898702_123898921_124065163
ENSMUSG00000032925.17_123897776_124081228_1	chr14	+	404	4	ISM	ENSMUSG00000032925.17	ENST00000618057.4	1853	10	282	129848	163	-129848	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACTGTTACTGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	123897775	124081228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_123897819_123898702_123898921_124077974_124078098_124081208
ENSMUSG00000032925.17_123897778_124065298_1	chr14	+	394	3	ISM	ENSMUSG00000032925.17	ENST00000376180.8	1881	11	165	145778	165	-145778	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCCAATGCAGGTAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	123897777	124065298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_123897819_123898702_123898921_124065163
ENSMUSG00000032925.17_124083854_124204062_1	chr14	+	422	4	ISM	ENSMUSG00000032925.17	ENSMUST00000049681.14	4065	11	186471	8968	186241	-7014	internal_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCGCTGTGTTTGTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	124083853	124204062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_124083992_124094844_124094992_124191982_124192100_124204042
ENSMUSG00000032925.17_124083924_124204097_1	chr14	+	387	4	ISM	ENSMUSG00000032925.17	ENSMUST00000049681.14	4065	11	186541	8933	186311	-6979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCAACACCTGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	124083923	124204097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_124083992_124094844_124094992_124191982_124192100_124204042
ENSMUSG00000032925.17_124083962_124204167_1	chr14	+	419	4	ISM	ENSMUSG00000032925.17	ENSMUST00000049681.14	4065	11	186579	8863	186349	-6909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACATTGTGCTCAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	124083961	124204167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_124083992_124094844_124094992_124191982_124192100_124204042
ENSMUSG00000032925.17_124094928_124209581_1	chr14	+	380	4	ISM	ENSMUSG00000032925.17	ENSMUST00000049681.14	4065	11	197545	3449	197315	-1495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGAGTTTTGTGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	124094927	124209581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_124094992_124191982_124192100_124204042_124204190_124209529
ENSMUSG00000032925.17_124192034_124210764_1	chr14	+	395	4	ISM	ENSMUSG00000032925.17	ENST00000376180.8	1881	11	294421	312	294421	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGGTACCGAATATCC	NA	NA	NA	NA	NA	NA	NA	NA	124192033	124210764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_124192100_124204042_124204190_124209529_124209644_124210696
ENSMUSG00000032939.15_94954402_95021709_1	chr8	+	528	6	ISM	ENSMUSG00000032939.15	ENSMUST00000109547.2	2847	21	113	19985	113	-19767	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTCTGTCGCAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	94954401	95021709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648
ENSMUSG00000032939.15_94993629_95013180_1	chr8	+	350	3	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	341	28296	341	-28296	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGATTCTGCACACACTG	NA	NA	NA	NA	NA	NA	NA	NA	94993628	95013180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_94993852_95007898_95007962_95013116
ENSMUSG00000032939.15_94993816_95021694_1	chr8	+	349	5	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	528	19782	528	-19782	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTGGACCTGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	94993815	95021694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_94993852_95007898_95007962_95013116_95013246_95019295_95019371_95021648
ENSMUSG00000032939.15_95013161_95023153_1	chr8	+	326	4	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	19873	18323	17927	-18323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGAGCAGTGTGGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	95013160	95023153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95013246_95019295_95019371_95021648_95021739_95023077
ENSMUSG00000032939.15_95023110_95028796_1	chr8	+	342	3	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	29822	12680	27876	-12680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCTTGGGGAATTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	95023109	95028796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95023218_95027387_95027521_95028695
ENSMUSG00000032939.15_95027468_95031911_1	chr8	+	515	5	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	34180	9565	32234	-9565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGCTGTTCCTGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	95027467	95031911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867
ENSMUSG00000032939.15_95030280_95031947_1	chr8	+	288	3	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	36992	9529	35046	-9529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCCTTCCTCTTCCGCAT	NA	NA	NA	NA	NA	NA	NA	NA	95030279	95031947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95030394_95030787_95030882_95031867
ENSMUSG00000032939.15_95031979_95033259_1	chr8	+	311	4	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	38691	8217	36745	-8217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAAGTAGAAAGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	95031978	95033259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95032060_95032652_95032780_95032901_95032975_95033229
ENSMUSG00000032939.15_95032900_95037010_1	chr8	+	558	6	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	39612	4466	37666	-4466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTTTTCTCTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	95032899	95037010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926
ENSMUSG00000032939.15_95035591_95041331_1	chr8	+	510	5	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	42303	145	40357	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGGGGTCTGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	95035590	95041331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ENSMUSG00000032939.15_95038187_95041488_1	chr8	+	379	2	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	44899	-12	42953	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95038186	95041488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95038290_95041212
ENSMUSG00000032940.17_75389883_75395759_1	chr16	+	382	4	ISM	ENSMUSG00000032940.17	ENST00000400577.4	834	5	57	2029	57	-2029	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGACATGCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	75389882	75395759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_75389932_75393401_75393565_75395057_75395131_75395662
ENSMUSG00000032940.17_75393426_75397520_1	chr16	+	436	4	ISM	ENSMUSG00000032940.17	ENST00000400577.4	834	5	3600	268	3600	-268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCAACCGCCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	75393425	75397520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_75393565_75395057_75395131_75395662_75395760_75397393
ENSMUSG00000032940.17_75393491_75397572_1	chr16	+	423	4	ISM	ENSMUSG00000032940.17	ENST00000400577.4	834	5	3665	216	3665	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTCTTGCGCCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	75393490	75397572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_75393565_75395057_75395131_75395662_75395760_75397393
ENSMUSG00000032940.17_75395740_75397788_1	chr16	+	415	2	ISM	ENSMUSG00000032940.17	ENST00000400577.4	834	5	5914	0	5914	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACTGTATCTGCACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	75395739	75397788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_75395760_75397393
ENSMUSG00000032948.11_75347135_75368288_1	chr16	-	695	7	FSM	ENSMUSG00000032948.11	ENST00000680801.1	755	7	0	60	0	-60	multi-exon	TRUE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGCGTGCCAGTACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	75368288	75347134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_75347252_75352669_75352782_75355454_75355560_75357614_75357678_75359153_75359244_75362418_75362521_75368182
ENSMUSG00000032959.13_117421081_117424309_1	chr5	-	661	3	ISM	ENSMUSG00000032959.13	ENSMUST00000036951.13	1240	4	1381	362	1339	123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTGTTGATATAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	117424309	117421080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_117421531_117423785_117423887_117424199
ENSMUSG00000032959.13_117421204_117425592_1	chr5	-	657	4	FSM	ENSMUSG00000032959.13	ENSMUST00000036951.13	1240	4	98	485	56	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTAGGGTGTCTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	117425592	117421203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_117421531_117423785_117423887_117424199_117424310_117425473
ENSMUSG00000032959.13_117421407_117425690_1	chr5	-	552	4	FSM	ENSMUSG00000032959.13	ENSMUST00000036951.13	1240	4	0	688	0	-203	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAACCTGGGAGCCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	117425690	117421406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_117421531_117423785_117423887_117424199_117424310_117425473
ENSMUSG00000032965.12_49522361_49526494_1	chr16	+	179	3	ISM	ENSMUSG00000032965.12	ENSMUST00000142682.9	1582	11	2694	57986	2694	-57986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGATGATGCCGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	49522360	49526494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_49522380_49523512_49523632_49526453
ENSMUSG00000032965.12_49523597_49532249_1	chr16	+	174	3	ISM	ENSMUSG00000032965.12	ENSMUST00000142682.9	1582	11	3930	52231	3930	-52231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCCAGACCTATCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	49523596	49532249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_49523632_49526453_49526545_49532201
ENSMUSG00000032965.12_49557100_49579728_1	chr16	+	179	3	ISM	ENSMUSG00000032965.12	ENSMUST00000142682.9	1582	11	37433	4752	37433	-4752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGCAGCCGAGAAAAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	49557099	49579728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_49557158_49578757_49578830_49579679
ENSMUSG00000032965.12_49581334_49584180_1	chr16	+	189	3	ISM	ENSMUSG00000032965.12	ENSMUST00000142682.9	1582	11	61667	300	61667	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGAGCACACGCTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	49581333	49584180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_49581380_49582963_49583031_49584104
ENSMUSG00000032966.15_151384403_151384786_1	chr2	+	311	2	ISM	ENSMUSG00000032966.15	ENST00000678408.1	1073	4	-125	18381	0	-18381	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCGGACCGGCCGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	151384402	151384786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_151384665_151384737
ENSMUSG00000032966.15_151384535_151399418_1	chr2	+	291	3	ISM	ENSMUSG00000032966.15	ENST00000678408.1	1073	4	7	3749	7	-3749	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTTCTCCTTTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	151384534	151399418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_151384665_151384737_151384786_151399305
ENSMUSG00000032966.15_151384535_151403167_1	chr2	+	1066	4	FSM	ENSMUSG00000032966.15	ENST00000678408.1	1073	4	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCAGAGACTTGAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	151384534	151403167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_151384665_151384737_151384786_151399305_151399386_151402359
ENSMUSG00000032966.15_151384616_151401540_1	chr2	+	260	3	ISM	ENSMUSG00000032966.15	ENST00000618612.5	1419	4	88	2071	88	-1627	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGTACTTAATGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	151384615	151401540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_151384665_151384737_151384786_151401377
ENSMUSG00000032966.15_151399361_151402588_1	chr2	+	269	3	ISM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	14958	1024	14833	-579	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGAGCTCTTCCTGACG	NA	NA	NA	NA	NA	NA	NA	NA	151399360	151402588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_151399419_151401377_151401541_151402540
ENSMUSG00000032977.10_77324204_77339719_1	chr10	-	364	4	ISM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	11900	1709	11900	-1709	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGGCAAACAGCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	77339719	77324203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77324308_77325831_77325901_77333196_77333348_77339679
ENSMUSG00000032977.10_77325832_77350248_1	chr10	-	398	4	ISM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	1371	3337	1371	-3337	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATAGCCCTGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	77350248	77325831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77325901_77333196_77333348_77339679_77339749_77350139
ENSMUSG00000032977.10_77333211_77351467_1	chr10	-	346	4	ISM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	152	10716	152	-10716	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAAGCCAGACGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	77351467	77333210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_77333348_77339679_77339749_77350139_77350249_77351436
ENSMUSG00000032997.17_75451447_75453385_1	chr1	-	1606	2	ISM	ENSMUSG00000032997.17	ENSMUST00000079205.14	2892	4	2530	234	2530	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTTTCTTGTCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	75453385	75451446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75452871_75453203
ENSMUSG00000032997.17_75451567_75453994_1	chr1	-	1590	3	ISM	ENSMUSG00000032997.17	ENSMUST00000079205.14	2892	4	1921	354	1921	-348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCGCTGGACAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	75453994	75451566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75452871_75453203_75453384_75453888
ENSMUSG00000032997.17_75452135_75455556_1	chr1	-	1611	4	FSM	ENSMUSG00000032997.17	ENSMUST00000079205.14	2892	4	359	922	359	-916	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCACCCACTAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	75455556	75452134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75455435
ENSMUSG00000032997.17_75452304_75455758_1	chr1	-	1644	4	FSM	ENSMUSG00000032997.17	ENSMUST00000079205.14	2892	4	157	1091	157	-1085	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGTATGAGCCACGCCA	NA	NA	NA	NA	NA	NA	NA	NA	75455758	75452303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75455435
ENSMUSG00000032997.17_75452345_75455765_1	chr1	-	1610	4	FSM	ENSMUSG00000032997.17	ENSMUST00000079205.14	2892	4	150	1132	150	-1126	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCTGGAACCTGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	75455765	75452344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75455435
ENSMUSG00000033004.17_103433757_103437585_1	chr14	-	449	5	ISM	ENSMUSG00000033004.17	ENST00000357337.11	15181	84	146630	82909	146630	-82909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTCGCTGTGGCTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	103437585	103433756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509
ENSMUSG00000033004.17_103438827_103444161_1	chr14	-	457	4	ISM	ENSMUSG00000033004.17	ENST00000357337.11	15181	84	140054	87979	140054	-87979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTGGTACTGCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	103444161	103438826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_103438874_103441757_103441977_103442612_103442714_103444071
ENSMUSG00000033004.17_103441847_103446257_1	chr14	-	447	4	ISM	ENSMUSG00000033004.17	ENST00000357337.11	15181	84	137958	90999	137958	-90999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCTCTCAGCTTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	103446257	103441846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_103441977_103442612_103442714_103444071_103444215_103446184
ENSMUSG00000033004.17_103444156_103450046_1	chr14	-	458	4	ISM	ENSMUSG00000033004.17	ENST00000357337.11	15181	84	134169	93308	134169	-93308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGTAGCAGAGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	103450046	103444155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_103444215_103446184_103446364_103448693_103448826_103449958
ENSMUSG00000033004.17_103485918_103506834_1	chr14	-	446	5	ISM	ENSMUSG00000033004.17	ENST00000357337.11	15181	84	77381	135070	77381	-135070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGAAGGCCACTTGGATC	NA	NA	NA	NA	NA	NA	NA	NA	103506834	103485917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_103486003_103489844_103489963_103497631_103497714_103500137_103500258_103506793
ENSMUSG00000033004.17_103524711_103528531_1	chr14	-	456	4	ISM	ENSMUSG00000033004.17	ENST00000357337.11	15181	84	55684	173863	55684	-173863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGTTATTTCTAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	103528531	103524710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_103524807_103525978_103526184_103526979_103527057_103528453
ENSMUSG00000033004.17_103534662_103543689_1	chr14	-	458	3	ISM	ENSMUSG00000033004.17	ENST00000357337.11	15181	84	40526	183814	40526	-183814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATGGATTATACAAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	103543689	103534661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_103534859_103536102_103536300_103543625
ENSMUSG00000033016.17_80650460_80679292_1	chr18	-	1168	2	ISM	ENSMUSG00000033016.17	ENSMUST00000236310.2	4315	10	72096	1040	72096	-657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTACAGGACAGAGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80679292	80650459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80651241_80678905
ENSMUSG00000033016.17_80650605_80696781_1	chr18	-	1216	4	ISM	ENSMUSG00000033016.17	ENSMUST00000236310.2	4315	10	54607	1185	54607	-802	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTCAGCCCCCTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	80696781	80650604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80651241_80678905_80679292_80693046_80693180_80696720
ENSMUSG00000033016.17_80650715_80706555_1	chr18	-	1147	5	ISM	ENSMUSG00000033016.17	ENSMUST00000236310.2	4315	10	44833	1295	44833	-912	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGAAGAGCCTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	80706555	80650714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80651241_80678905_80679292_80693046_80693180_80696720_80696777_80706509
ENSMUSG00000033016.17_80650856_80708558_1	chr18	-	1163	6	ISM	ENSMUSG00000033016.17	ENSMUST00000236310.2	4315	10	42830	1436	42830	-1053	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGTGCCTTATTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	80708558	80650855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80651241_80678905_80679292_80693046_80693180_80696720_80696777_80706509_80706651_80708496
ENSMUSG00000033016.17_80650910_80708605_1	chr18	-	1156	6	ISM	ENSMUSG00000033016.17	ENSMUST00000236310.2	4315	10	42783	1490	42783	-1107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGTGGCAGACTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	80708605	80650909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80651241_80678905_80679292_80693046_80693180_80696720_80696777_80706509_80706651_80708496
ENSMUSG00000033016.17_80651046_80710250_1	chr18	-	1162	7	ISM	ENSMUSG00000033016.17	ENSMUST00000236310.2	4315	10	41138	1626	41138	-1243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGCTTATGTCTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	80710250	80651045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80651241_80678905_80679292_80693046_80693180_80696720_80696777_80706509_80706651_80708496_80708670_80710172
ENSMUSG00000033016.17_80651117_80710313_1	chr18	-	1154	7	ISM	ENSMUSG00000033016.17	ENSMUST00000236310.2	4315	10	41075	1697	41075	-1314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATGAGATAAACTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	80710313	80651116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80651241_80678905_80679292_80693046_80693180_80696720_80696777_80706509_80706651_80708496_80708670_80710172
ENSMUSG00000033016.17_80651206_80725415_1	chr18	-	1169	8	ISM	ENSMUSG00000033016.17	ENSMUST00000236310.2	4315	10	25973	1786	25973	-1403	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCCCACTCCTAATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	80725415	80651205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80651241_80678905_80679292_80693046_80693180_80696720_80696777_80706509_80706651_80708496_80708670_80710172_80710376_80725373
ENSMUSG00000033016.17_80678906_80725533_1	chr18	-	1252	7	ISM	ENSMUSG00000033016.17	ENSMUST00000236310.2	4315	10	25855	29486	25855	11744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCCACATCTGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	80725533	80678905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80679292_80693046_80693180_80696720_80696777_80706509_80706651_80708496_80708670_80710172_80710376_80725373
ENSMUSG00000033016.17_80679084_80755981_1	chr18	-	1201	8	ISM	ENSMUSG00000033016.17	ENST00000397790.6	3107	9	290	29281	0	11566	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCACGACCTTTCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	80755981	80679083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80679292_80693046_80693180_80696720_80696777_80706509_80706651_80708496_80708670_80710172_80710376_80725373_80725534_80755854
ENSMUSG00000033016.17_80679134_80755981_1	chr18	-	1151	8	ISM	ENSMUSG00000033016.17	ENST00000397790.6	3107	9	290	29331	0	11516	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCCCAGAGGAACACGCT	NA	NA	NA	NA	NA	NA	NA	NA	80755981	80679133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80679292_80693046_80693180_80696720_80696777_80706509_80706651_80708496_80708670_80710172_80710376_80725373_80725534_80755854
ENSMUSG00000033016.17_80679204_80756063_1	chr18	-	1163	8	ISM	ENSMUSG00000033016.17	ENST00000397790.6	3107	9	208	29401	-34	11446	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTACTACAGCCAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	80756063	80679203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80679292_80693046_80693180_80696720_80696777_80706509_80706651_80708496_80708670_80710172_80710376_80725373_80725534_80755854
ENSMUSG00000033016.17_80693050_80740858_1	chr18	-	867	7	ISM	ENSMUSG00000033016.17	ENST00000587635.5	2084	8	15171	29	10530	-29	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTAACTCTGTCTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	80740858	80693049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80693180_80696720_80696777_80706509_80706651_80708581_80708670_80710172_80710376_80725373_80725534_80740769
ENSMUSG00000033016.17_80693067_80756273_1	chr18	-	1265	7	ISM	ENSMUSG00000033016.17	ENST00000397790.6	3107	9	-2	43264	0	-46	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTACCTTCCTGCCAATG	NA	NA	NA	NA	NA	NA	NA	NA	80756273	80693066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80693180_80696720_80696777_80706509_80706651_80708496_80708670_80710172_80710376_80725373_80725534_80755854
ENSMUSG00000033016.17_80693091_80740919_1	chr18	-	887	7	ISM	ENSMUSG00000033016.17	ENST00000587635.5	2084	8	15110	70	10469	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGAAGCCAGTACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	80740919	80693090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80693180_80696720_80696777_80706509_80706651_80708581_80708670_80710172_80710376_80725373_80725534_80740769
ENSMUSG00000033016.17_80693137_80756273_1	chr18	-	1195	7	ISM	ENSMUSG00000033016.17	ENST00000397790.6	3107	9	-2	43334	0	-116	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCAGCCCCGTCCAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	80756273	80693136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80693180_80696720_80696777_80706509_80706651_80708496_80708670_80710172_80710376_80725373_80725534_80755854
ENSMUSG00000033016.17_80693138_80740980_1	chr18	-	901	7	ISM	ENSMUSG00000033016.17	ENST00000587635.5	2084	8	15049	117	10408	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCAGCCCCGTCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	80740980	80693137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80693180_80696720_80696777_80706509_80706651_80708581_80708670_80710172_80710376_80725373_80725534_80740769
ENSMUSG00000033016.17_80708599_80741225_1	chr18	-	890	4	ISM	ENSMUSG00000033016.17	ENSMUST00000035800.8	4505	8	10163	17949	10163	-15578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAAGAACACCAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	80741225	80708598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80708670_80710172_80710376_80725373_80725534_80740769
ENSMUSG00000033016.17_80710227_80741344_1	chr18	-	884	3	ISM	ENSMUSG00000033016.17	ENSMUST00000035800.8	4505	8	10044	19577	10044	-17206	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACCAAAGTCCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	80741344	80710226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80710376_80725373_80725534_80740769
ENSMUSG00000033016.17_80710326_80741449_1	chr18	-	890	3	ISM	ENSMUSG00000033016.17	ENSMUST00000035800.8	4505	8	9939	19676	9939	-17305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGCTGACGACCGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	80741449	80710325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80710376_80725373_80725534_80740769
ENSMUSG00000033016.17_80725467_80741584_1	chr18	-	882	2	ISM	ENSMUSG00000033016.17	ENSMUST00000035800.8	4505	8	9804	34817	9804	-32446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGCCCAAGTCTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	80741584	80725466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80725534_80740769
ENSMUSG00000033016.17_80741029_80755981_1	chr18	-	970	2	ISM	ENSMUSG00000033016.17	ENST00000587635.5	2084	8	48	48008	0	-48008	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCACTCTGGACCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	80755981	80741028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80741872_80755854
ENSMUSG00000033016.17_80741082_80755981_1	chr18	-	917	2	ISM	ENSMUSG00000033016.17	ENST00000587635.5	2084	8	48	48061	0	-48061	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAGTATACCAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	80755981	80741081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80741872_80755854
ENSMUSG00000033016.17_80741145_80756004_1	chr18	-	877	2	ISM	ENSMUSG00000033016.17	ENST00000587635.5	2084	8	25	48124	-23	-48124	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACCATCCCCCCATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	80756004	80741144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80741872_80755854
ENSMUSG00000033020.8_79025209_79035607_1	chr15	+	699	4	ISM	ENSMUSG00000033020.8	ENSMUST00000230271.2	885	5	0	367	0	-321	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTCCTCCTCCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	79025208	79035607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535
ENSMUSG00000033020.8_79025440_79035974_1	chr15	+	654	5	FSM	ENSMUSG00000033020.8	ENSMUST00000230271.2	885	5	231	0	-111	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGTTACCTGCGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79025439	79035974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535_79035608_79035788
ENSMUSG00000033020.8_79025566_79035964_1	chr15	+	551	5	FSM	ENSMUSG00000033020.8	ENST00000470701.1	493	5	-47	-11	15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCCCTCTCCCCGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	79025565	79035964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_79025668_79028793_79028864_79030252_79030384_79035535_79035608_79035788
ENSMUSG00000033020.8_79025566_79035964_2	chr15	+	548	5	NNC	ENSMUSG00000033020.8	novel	885	5	NA	NA	15	-10	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCCCTCTCCCCGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	79025565	79035964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_79025665_79028793_79028864_79030252_79030384_79035535_79035608_79035788
ENSMUSG00000033021.17_75412628_75415517_1	chr1	+	621	5	ISM	ENSMUSG00000033021.17	ENST00000358215.8	1794	13	10	4302	10	-4300	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGGCCTCTACCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	75412627	75415517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75412967_75413434_75413483_75413580_75413679_75414894_75414999_75415485
ENSMUSG00000033021.17_75412628_75419655_1	chr1	+	1322	13	FSM	ENSMUSG00000033021.17	ENSMUST00000037796.14	1539	13	54	163	10	-162	multi-exon	FALSE	canonical	NA	NA	NA	NA	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCCCCCAGGACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	75412627	75419655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ENSMUSG00000033021.17_75412757_75415673_1	chr1	+	648	5	ISM	ENSMUSG00000033021.17	ENST00000358215.8	1794	13	139	4146	139	-4144	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGGGCTGGAGGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	75412756	75415673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75412967_75413434_75413483_75413580_75413679_75414894_75414999_75415485
ENSMUSG00000033021.17_75412915_75417156_1	chr1	+	650	7	ISM	ENSMUSG00000033021.17	ENST00000358215.8	1794	13	297	2663	297	-2661	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCAGCGTAACCAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	75412914	75417156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75412967_75413434_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055
ENSMUSG00000033021.17_75413586_75418163_1	chr1	+	620	6	ISM	ENSMUSG00000033021.17	ENST00000358215.8	1794	13	968	1656	968	-1654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGGACGTGTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	75413585	75418163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118
ENSMUSG00000033021.17_75418119_75419655_1	chr1	+	653	6	ISM	ENSMUSG00000033021.17	ENST00000358215.8	1794	13	5501	164	5501	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCCCCCAGGACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	75418118	75419655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ENSMUSG00000033021.17_75418627_75419819_1	chr1	+	586	4	ISM	ENSMUSG00000033021.17	ENST00000358215.8	1794	13	6009	0	6009	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTTGGACTCCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	75418626	75419819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75418676_75418828_75418922_75419087_75419257_75419544
ENSMUSG00000033032.16_61863602_61866805_1	chr18	-	811	2	ISM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	24995	435	24995	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTGAGGAAGTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	61866805	61863601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61864382_61866774
ENSMUSG00000033032.16_61863651_61866870_1	chr18	-	827	2	ISM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	24930	484	24930	-319	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTACTTAATGTGACACTG	NA	NA	NA	NA	NA	NA	NA	NA	61866870	61863650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61864382_61866774
ENSMUSG00000033032.16_61863846_61868793_1	chr18	-	820	3	ISM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	23007	679	23007	-514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTTAGAGCCAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	61868793	61863845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61864382_61866774_61866904_61868638
ENSMUSG00000033032.16_61864010_61870615_1	chr18	-	894	5	ISM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	21185	843	21185	-678	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAGAAAACCACTC	NA	NA	NA	NA	NA	NA	NA	NA	61870615	61864009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870566
ENSMUSG00000033032.16_61864269_61872226_1	chr18	-	803	7	ISM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	19574	1102	19574	-937	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCACCCAAAAGACCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	61872226	61864268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870566_61870679_61871754_61871828_61872194
ENSMUSG00000033032.16_61864321_61872283_1	chr18	-	808	7	ISM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	19517	1154	19517	-989	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCGTTCTAAGGAGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	61872283	61864320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870566_61870679_61871754_61871828_61872194
ENSMUSG00000033032.16_61866854_61874772_1	chr18	-	797	7	ISM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	17028	3687	17028	-3522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGTGTTTCTGAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	61874772	61866853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61866904_61868638_61868818_61869853_61870019_61870566_61870679_61871754_61871828_61872194_61872341_61874700
ENSMUSG00000033032.16_61868638_61874912_1	chr18	-	888	6	ISM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	16888	5471	16888	-5306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCGGCGCCCCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	61874912	61868637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61868818_61869853_61870019_61870566_61870679_61871754_61871828_61872194_61872341_61874700
ENSMUSG00000033032.16_61868783_61876405_1	chr18	-	800	7	ISM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	15395	5616	15395	-5451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGAAGCTCAATGCCG	NA	NA	NA	NA	NA	NA	NA	NA	61876405	61868782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61868818_61869853_61870019_61870566_61870679_61871754_61871828_61872194_61872341_61874700_61874913_61876348
ENSMUSG00000033032.16_61869962_61876787_1	chr18	-	803	7	ISM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	15013	6795	15013	-6630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTAGAAAAAGAGAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	61876787	61869961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61870019_61870566_61870679_61871754_61871828_61872194_61872341_61874700_61874913_61876348_61876502_61876737
ENSMUSG00000033032.16_61870611_61879911_1	chr18	-	809	7	ISM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	11889	7444	11889	-7279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCGTGCGGACCCGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	61879911	61870610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61870679_61871754_61871828_61872194_61872341_61874700_61874913_61876348_61876502_61876737_61876832_61879848
ENSMUSG00000033032.16_61872192_61881946_1	chr18	-	881	6	ISM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	9854	9025	9854	-8860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGTGGCTCCGTGGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	61881946	61872191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61872341_61874700_61874913_61876348_61876502_61876737_61876832_61879848_61879942_61881766
ENSMUSG00000033032.16_61874886_61885628_1	chr18	-	808	7	ISM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	6172	11719	6172	-11554	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAAGGAACGGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	61885628	61874885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61874913_61876348_61876502_61876737_61876832_61879848_61879942_61881766_61881947_61884736_61884949_61885579
ENSMUSG00000033032.16_61876378_61888652_1	chr18	-	821	7	ISM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	3148	13211	3148	-13046	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTGAGGACGAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	61888652	61876377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61876502_61876737_61876832_61879848_61879942_61881766_61881947_61884736_61884949_61885579_61885679_61888633
ENSMUSG00000033032.16_61876429_61888716_1	chr18	-	834	7	ISM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	3084	13262	3084	-13097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCATCAGTTTCTCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	61888716	61876428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61876502_61876737_61876832_61879848_61879942_61881766_61881947_61884736_61884949_61885579_61885679_61888633
ENSMUSG00000033032.16_61876779_61889969_1	chr18	-	808	7	ISM	ENSMUSG00000033032.16	ENSMUST00000120472.2	3444	19	29804	13447	1831	-13447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTTCCACTCTCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	61889969	61876778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61876832_61879848_61879942_61881766_61881947_61884736_61884949_61885579_61885679_61888633_61888746_61889910
ENSMUSG00000033032.16_61881766_61891698_1	chr18	-	811	7	ISM	ENSMUSG00000033032.16	ENSMUST00000120472.2	3444	19	28075	18434	102	-18434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGCATCCACAAGACACTC	NA	NA	NA	NA	NA	NA	NA	NA	61891698	61881765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61881947_61884736_61884949_61885579_61885679_61888633_61888746_61889910_61890006_61890722_61890807_61891670
ENSMUSG00000033032.16_61881820_61891747_1	chr18	-	806	7	ISM	ENSMUSG00000033032.16	ENSMUST00000120472.2	3444	19	28026	18488	53	-18488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTAGTGCTGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	61891747	61881819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61881947_61884736_61884949_61885579_61885679_61888633_61888746_61889910_61890006_61890722_61890807_61891670
ENSMUSG00000033047.6_78959448_78969835_1	chr15	+	842	9	ISM	ENSMUSG00000033047.6	ENSMUST00000040518.6	1942	13	69	8770	69	-8613	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGCCTGCATTCTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	78959447	78969835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756
ENSMUSG00000033047.6_78959969_78973799_1	chr15	+	1102	9	ISM	ENSMUSG00000033047.6	ENST00000406934.5	1821	11	81	4796	0	-4649	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCCAGGTCTATGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	78959968	78973799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78960020_78961030_78961242_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663
ENSMUSG00000033047.6_78960007_78970665_1	chr15	+	869	9	ISM	ENSMUSG00000033047.6	ENSMUST00000040518.6	1942	13	628	7940	38	-7783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACCTACTATTATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	78960006	78970665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633
ENSMUSG00000033047.6_78961076_78970710_1	chr15	+	856	8	ISM	ENSMUSG00000033047.6	ENSMUST00000040518.6	1942	13	1697	7895	1107	-7738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCAGGATGCTATCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	78961075	78970710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633
ENSMUSG00000033047.6_78961129_78974035_1	chr15	+	1189	8	ISM	ENSMUSG00000033047.6	ENST00000406934.5	1821	11	1241	4560	1160	-4413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2971	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTTCCGCATCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	78961128	78974035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78961242_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663
ENSMUSG00000033047.6_78961186_78973708_1	chr15	+	885	9	ISM	ENSMUSG00000033047.6	ENSMUST00000040518.6	1942	13	1807	4897	1217	-4740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1092	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCATGTACCCGATGCG	NA	NA	NA	NA	NA	NA	NA	NA	78961185	78973708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663
ENSMUSG00000033047.6_78961221_78973800_1	chr15	+	942	9	ISM	ENSMUSG00000033047.6	ENSMUST00000040518.6	1942	13	1842	4805	1252	-4648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAGGTCTATGAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	78961220	78973800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663
ENSMUSG00000033047.6_78963192_78974161_1	chr15	+	1203	7	ISM	ENSMUSG00000033047.6	ENST00000406934.5	1821	11	3304	4434	3223	-4287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTATACCCGGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	78963191	78974161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663
ENSMUSG00000033047.6_78965787_78977617_1	chr15	+	1221	7	ISM	ENSMUSG00000033047.6	ENST00000406934.5	1821	11	5899	978	5818	-831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGTCTGAGAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	78965786	78977617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536
ENSMUSG00000033047.6_78966054_78978448_1	chr15	+	1199	7	ISM	ENSMUSG00000033047.6	ENST00000406934.5	1821	11	6166	147	6085	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACGAGTCAAGAACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	78966053	78978448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
ENSMUSG00000033047.6_78968307_78978605_1	chr15	+	1287	6	ISM	ENSMUSG00000033047.6	ENST00000406934.5	1821	11	8419	-10	8338	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTCTCATTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	78968306	78978605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
ENSMUSG00000033047.6_78970634_78978605_1	chr15	+	955	4	ISM	ENSMUSG00000033047.6	ENST00000406934.5	1821	11	10746	-10	10665	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1679	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTCTCATTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	78970633	78978605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78970805_78973663_78974162_78977536_78977618_78978400
ENSMUSG00000033055.13_78937294_78945411_1	chr15	-	1491	7	ISM	ENSMUSG00000033055.13	ENSMUST00000040676.11	1904	8	1674	0	1674	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTTTTTGTGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	78945411	78937293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942254_78945363
ENSMUSG00000033055.13_78937304_78946822_1	chr15	-	1626	8	NIC	ENSMUSG00000033055.13	novel	1904	8	NA	NA	263	-10	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCTGGTTGTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78946822	78937303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942249_78945363_78945412_78946672
ENSMUSG00000033055.13_78937445_78946845_1	chr15	-	1508	8	NIC	ENSMUSG00000033055.13	novel	1904	8	NA	NA	240	-151	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCTGGGAGCCGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	78946845	78937444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942249_78945363_78945412_78946672
ENSMUSG00000033055.13_78937497_78946895_1	chr15	-	1511	8	FSM	ENSMUSG00000033055.13	ENSMUST00000040676.11	1904	8	190	203	190	-203	multi-exon	FALSE	canonical	NA	NA	NA	NA	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAGGAGGCAGGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	78946895	78937496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78946672
ENSMUSG00000033055.13_78937509_78946913_1	chr15	-	1512	8	NIC	ENSMUSG00000033055.13	novel	1904	8	NA	NA	172	-215	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGAGCCCTGGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	78946913	78937508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942249_78945363_78945412_78946672
ENSMUSG00000033055.13_78937532_78946914_1	chr15	-	1490	8	NNC	ENSMUSG00000033055.13	novel	1904	8	NA	NA	171	-238	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGGTGAGCTGGGTATC	NA	NA	NA	NA	NA	NA	NA	NA	78946914	78937531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940281_78942154_78942254_78945363_78945412_78946672
ENSMUSG00000033055.13_78938710_78945411_1	chr15	-	481	6	ISM	ENSMUSG00000033055.13	ENST00000406423.5	627	8	17252	511	1674	-511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCAAAGAACAGGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	78945411	78938709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942249_78945363
ENSMUSG00000033059.8_150661843_150669174_1	chr2	+	552	5	ISM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	33188	4504	33188	-4504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTCTTCATCTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	150661842	150669174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024
ENSMUSG00000033059.8_150669111_150672554_1	chr2	+	597	4	ISM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	40456	1124	40456	-1124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGGAATGGTTTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	150669110	150672554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_150669233_150670363_150670499_150671547_150671615_150672281
ENSMUSG00000033059.8_150670417_150672673_1	chr2	+	541	3	ISM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	41762	1005	41762	-1005	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCCATCATCATCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	150670416	150672673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_150670499_150671547_150671615_150672281
ENSMUSG00000033063.9_64912038_64941139_1	chr13	-	1305	9	ISM	ENSMUSG00000033063.9	ENSMUST00000091554.6	6344	24	110630	28042	94473	-256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTCTCTTCCTAATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	64941139	64912037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_64912096_64919769_64919971_64920482_64920603_64926603_64926711_64929539_64929712_64933032_64933174_64935516_64935779_64940112_64940260_64941042
ENSMUSG00000033063.9_64919897_64942066_1	chr13	-	1297	9	ISM	ENSMUSG00000033063.9	ENSMUST00000091554.6	6344	24	109703	35901	93546	-8115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATTCTGCAACCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	64942066	64919896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_64919971_64920482_64920603_64926603_64926711_64929539_64929712_64933032_64933174_64935516_64935779_64940112_64940260_64941042_64941228_64941977
ENSMUSG00000033063.9_64920483_64942181_1	chr13	-	1338	8	ISM	ENSMUSG00000033063.9	ENST00000377659.1	2298	13	93431	8701	93431	-8701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTAATAGCCTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	64942181	64920482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_64920603_64926603_64926711_64929539_64929712_64933032_64933174_64935516_64935779_64940112_64940260_64941042_64941228_64941977
ENSMUSG00000033063.9_64926630_64946980_1	chr13	-	1292	8	ISM	ENSMUSG00000033063.9	ENST00000377659.1	2298	13	88632	14848	88632	-14848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACACTGGAACAACCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	64946980	64926629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_64926711_64929539_64929712_64933032_64933174_64935516_64935779_64940112_64940260_64941042_64941228_64941977_64942182_64946880
ENSMUSG00000033063.9_64929556_65006534_1	chr13	-	1366	8	ISM	ENSMUSG00000033063.9	ENST00000377659.1	2298	13	29078	17774	29078	-17774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCATCATAGACCGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	65006534	64929555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_64929712_64933032_64933174_64935516_64935779_64940112_64940260_64941042_64941228_64941977_64942182_64946880_64947029_65006411
ENSMUSG00000033063.9_64929662_65006571_1	chr13	-	1297	8	ISM	ENSMUSG00000033063.9	ENST00000377659.1	2298	13	29041	17880	29041	-17880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGGCTGCCTGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	65006571	64929661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_64929712_64933032_64933174_64935516_64935779_64940112_64940260_64941042_64941228_64941977_64942182_64946880_64947029_65006411
ENSMUSG00000033063.9_64933079_65035578_1	chr13	-	1307	8	ISM	ENSMUSG00000033063.9	ENST00000377659.1	2298	13	34	21297	34	-21297	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTCTGTGGAGATTCA	NA	NA	NA	NA	NA	NA	NA	NA	65035578	64933078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_64933174_64935516_64935779_64940112_64940260_64941042_64941228_64941977_64942182_64946880_64947029_65006411_65006606_65035506
ENSMUSG00000033063.9_65006495_65035575_1	chr13	-	180	2	ISM	ENSMUSG00000033063.9	ENST00000377659.1	2298	13	37	94713	37	-94713	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGGGTGACCAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	65035575	65006494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_65006606_65035506
ENSMUSG00000033065.15_98010085_98019133_1	chr15	+	441	5	ISM	ENSMUSG00000033065.15	ENST00000551339.6	2863	23	3671	11179	3671	-11179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGCTCAATCGACAATGA	NA	NA	NA	NA	NA	NA	NA	NA	98010084	98019133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077
ENSMUSG00000033065.15_98019122_98024295_1	chr15	+	831	9	ISM	ENSMUSG00000033065.15	ENST00000551339.6	2863	23	12708	6017	12708	-6017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTACATGATGGCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	98019121	98024295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184
ENSMUSG00000033065.15_98021694_98026193_1	chr15	+	834	8	ISM	ENSMUSG00000033065.15	ENST00000551339.6	2863	23	15280	4119	15280	-4119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAACCCTTCACCATTC	NA	NA	NA	NA	NA	NA	NA	NA	98021693	98026193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059
ENSMUSG00000033065.15_98024216_98029380_1	chr15	+	851	8	ISM	ENSMUSG00000033065.15	ENST00000551339.6	2863	23	17802	932	17802	-932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGAGTTACCGTAATGG	NA	NA	NA	NA	NA	NA	NA	NA	98024215	98029380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299
ENSMUSG00000033065.15_98025519_98029951_1	chr15	+	823	7	ISM	ENSMUSG00000033065.15	ENST00000551339.6	2863	23	19105	361	19105	-361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGGGGAAAGATCATGT	NA	NA	NA	NA	NA	NA	NA	NA	98025518	98029951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ENSMUSG00000033065.15_98026153_98030186_1	chr15	+	843	6	ISM	ENSMUSG00000033065.15	ENST00000551339.6	2863	23	19739	126	19739	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTAGATTTCAGCTACTC	NA	NA	NA	NA	NA	NA	NA	NA	98026152	98030186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ENSMUSG00000033065.15_98027154_98030322_1	chr15	+	900	5	ISM	ENSMUSG00000033065.15	ENST00000551339.6	2863	23	20740	-10	20740	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTTTTGGGCGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	98027153	98030322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ENSMUSG00000033066.17_67487400_67574331_1	chr11	+	726	7	NNC	ENSMUSG00000033066.17	novel	745	7	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGGGGCTGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	67487399	67574331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_67487526_67493933_67494055_67520435_67520517_67534106_67534193_67543684_67543739_67573460_67573560_67574172
ENSMUSG00000033066.17_67487400_67574331_2	chr11	+	735	7	FSM	ENSMUSG00000033066.17	ENST00000396115.6	745	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGGGGCTGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	67487399	67574331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_67487526_67493933_67494055_67520435_67520517_67534106_67534193_67543684_67543739_67573460_67573560_67574163
ENSMUSG00000033066.17_67487400_67574331_3	chr11	+	726	7	NNC	ENSMUSG00000033066.17	novel	745	7	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGGGGCTGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	67487399	67574331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_67487526_67493933_67494055_67520435_67520517_67534106_67534193_67543684_67543739_67573469_67573560_67574163
ENSMUSG00000033068.17_150595032_150612642_2	chr2	+	1235	12	FSM	ENSMUSG00000033068.17	ENST00000433259.6	1305	12	70	0	70	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCAGCTGAGCCCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	150595031	150612642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150608878_150609017_150610784_150610870_150612195_150612325_150612548
ENSMUSG00000033075.18_97938677_97946272_1	chr15	-	2599	5	ISM	ENSMUSG00000033075.18	ENST00000448372.5	4290	18	44565	0	44565	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGAGGATAAGTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	97946272	97938676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97940834_97943183_97943280_97943739_97943825_97943964_97944020_97946066
ENSMUSG00000033075.18_97938934_97956198_1	chr15	-	2594	7	ISM	ENSMUSG00000033075.18	ENST00000448372.5	4290	18	34639	257	34639	-257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATCACAGGATACGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	97956198	97938933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97940834_97943183_97943280_97943739_97943825_97943964_97944020_97946066_97946271_97954709_97954842_97956076
ENSMUSG00000033075.18_97939113_97964342_1	chr15	-	2686	11	ISM	ENSMUSG00000033075.18	ENST00000448372.5	4290	18	26495	436	26495	-436	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCGGGCCCTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	97964342	97939112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97940834_97943183_97943280_97943739_97943825_97943964_97944020_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284
ENSMUSG00000033075.18_97939274_97964556_1	chr15	-	2739	11	ISM	ENSMUSG00000033075.18	ENST00000448372.5	4290	18	26281	597	26281	340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCTCCACTCCAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	97964556	97939273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97940834_97943183_97943280_97943739_97943825_97943964_97944020_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284
ENSMUSG00000033075.18_97939475_97964698_1	chr15	-	2598	12	ISM	ENSMUSG00000033075.18	ENST00000448372.5	4290	18	26139	798	26139	139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTAGTTTTCTATGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	97964698	97939474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97940834_97943183_97943280_97943739_97943825_97943964_97944020_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638
ENSMUSG00000033075.18_97939614_97973863_1	chr15	-	2677	13	ISM	ENSMUSG00000033075.18	ENST00000448372.5	4290	18	16974	937	16974	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTTGTTGTTTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	97973863	97939613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97940834_97943183_97943280_97943739_97943825_97943964_97944020_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689
ENSMUSG00000033075.18_97939788_97974527_1	chr15	-	2597	14	NNC	ENSMUSG00000033075.18	novel	4290	18	NA	NA	16310	-174	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCAGCACACAGTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	97974527	97939787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97943965_97944020_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430
ENSMUSG00000033075.18_97939803_97974566_1	chr15	-	2622	14	ISM	ENSMUSG00000033075.18	ENST00000448372.5	4290	18	16271	1126	16271	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCATCTTTCAAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	97974566	97939802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97940834_97943183_97943280_97943739_97943825_97943964_97944020_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430
ENSMUSG00000033075.18_97939905_97980187_1	chr15	-	2608	15	ISM	ENSMUSG00000033075.18	ENST00000448372.5	4290	18	10650	1228	10650	-291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACAATGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	97980187	97939904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97940834_97943183_97943280_97943739_97943825_97943964_97944020_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123
ENSMUSG00000033075.18_97939992_97980211_1	chr15	-	2545	15	ISM	ENSMUSG00000033075.18	ENST00000448372.5	4290	18	10626	1315	10626	-378	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGCTAGTTAGTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	97980211	97939991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_97940834_97943183_97943280_97943739_97943825_97943964_97944020_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123
ENSMUSG00000033075.18_97940184_97990768_1	chr15	-	2714	18	FSM	ENSMUSG00000033075.18	ENST00000448372.5	4290	18	69	1507	69	-570	multi-exon	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTCGAGCAGTCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	97990768	97940183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97943964_97944020_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990583
ENSMUSG00000033075.18_97940274_97990768_1	chr15	-	2624	18	FSM	ENSMUSG00000033075.18	ENST00000448372.5	4290	18	69	1597	69	-660	multi-exon	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGACCGACTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	97990768	97940273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97943964_97944020_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990583
ENSMUSG00000033075.18_97940314_97990810_1	chr15	-	2626	18	FSM	ENSMUSG00000033075.18	ENST00000448372.5	4290	18	27	1637	27	-700	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAAGTCCCTCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	97990810	97940313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97943964_97944020_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990583
ENSMUSG00000033083.17_101682014_101703090_1	chr14	-	1525	9	ISM	ENSMUSG00000033083.17	ENST00000648194.1	3976	18	42044	777	42044	-777	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAACGAATGACAAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	101703090	101682013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101682208_101684962_101685140_101686637_101686808_101689853_101690014_101692282_101692528_101695501_101695661_101696170_101696330_101700310_101700512_101703030
ENSMUSG00000033083.17_101682088_101703161_1	chr14	-	1522	9	ISM	ENSMUSG00000033083.17	ENST00000648194.1	3976	18	41973	851	41973	-851	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAACAGATCCGGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	101703161	101682087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101682208_101684962_101685140_101686637_101686808_101689853_101690014_101692282_101692528_101695501_101695661_101696170_101696330_101700310_101700512_101703030
ENSMUSG00000033083.17_101684994_101714556_1	chr14	-	1551	9	ISM	ENSMUSG00000033083.17	ENST00000648194.1	3976	18	30578	3757	30578	-3757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACATGGACCTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	101714556	101684993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101685140_101686637_101686808_101689853_101690014_101692282_101692528_101695501_101695661_101696170_101696330_101700310_101700512_101703030_101703201_101714415
ENSMUSG00000033083.17_101686731_101724945_1	chr14	-	1555	10	ISM	ENSMUSG00000033083.17	ENST00000648194.1	3976	18	20189	5494	20189	-5494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGTGTGAAAACTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	101724945	101686730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101686808_101689853_101690014_101692282_101692528_101695501_101695661_101696170_101696330_101700310_101700512_101703030_101703201_101714415_101714643_101716566_101716642_101724863
ENSMUSG00000033083.17_101689920_101727021_1	chr14	-	1524	10	ISM	ENSMUSG00000033083.17	ENST00000648194.1	3976	18	18113	8683	18113	-8683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCCCTGGTTCCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	101727021	101689919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101690014_101692282_101692528_101695501_101695661_101696170_101696330_101700310_101700512_101703030_101703201_101714415_101714643_101716566_101716642_101724863_101724984_101726947
ENSMUSG00000033083.17_101692394_101731878_1	chr14	-	1545	11	ISM	ENSMUSG00000033083.17	ENST00000648194.1	3976	18	13256	11157	13256	-11157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCCTGCTTCTGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	101731878	101692393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101692528_101695501_101695661_101696170_101696330_101700310_101700512_101703030_101703201_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781
ENSMUSG00000033083.17_101695501_101712552_1	chr14	-	730	5	ISM	ENSMUSG00000033083.17	ENST00000431480.6	4800	20	133513	14264	32582	-14264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTGTCAAATGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	101712552	101695500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101695661_101696170_101696330_101700310_101700512_101703030_101703201_101712512
ENSMUSG00000033083.17_101695501_101738555_1	chr14	-	1556	11	ISM	ENSMUSG00000033083.17	ENST00000648194.1	3976	18	6579	14264	6579	-14264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTGTCAAATGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	101738555	101695500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101695661_101696170_101696330_101700310_101700512_101703030_101703201_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447
ENSMUSG00000033083.17_101695572_101712590_1	chr14	-	697	5	ISM	ENSMUSG00000033083.17	ENST00000431480.6	4800	20	133475	14335	32544	-14335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGACACCTCCTATAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	101712590	101695571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101695661_101696170_101696330_101700310_101700512_101703030_101703201_101712512
ENSMUSG00000033083.17_101695623_101712646_1	chr14	-	702	5	ISM	ENSMUSG00000033083.17	ENST00000431480.6	4800	20	133419	14386	32488	-14386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCATTACAATATCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	101712646	101695622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101695661_101696170_101696330_101700310_101700512_101703030_101703201_101712512
ENSMUSG00000033083.17_101696208_101744604_1	chr14	-	1527	12	ISM	ENSMUSG00000033083.17	ENST00000648194.1	3976	18	530	14971	530	-14971	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGACATGGAAGATATCCA	NA	NA	NA	NA	NA	NA	NA	NA	101744604	101696207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101696330_101700310_101700512_101703030_101703201_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447_101738553_101742543_101742634_101744523
ENSMUSG00000033083.17_101696223_101714540_1	chr14	-	768	5	ISM	ENSMUSG00000033083.17	ENST00000431480.6	4800	20	131525	14986	30594	-14986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTAAAATCAGGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	101714540	101696222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101696330_101700310_101700512_101703030_101703201_101712512_101712678_101714415
ENSMUSG00000033083.17_101696293_101714574_1	chr14	-	732	5	ISM	ENSMUSG00000033083.17	ENST00000431480.6	4800	20	131491	15056	30560	-15056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATGAAGAAGTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	101714574	101696292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101696330_101700310_101700512_101703030_101703201_101712512_101712678_101714415
ENSMUSG00000033083.17_101700410_101716603_1	chr14	-	701	5	ISM	ENSMUSG00000033083.17	ENST00000431480.6	4800	20	129462	19173	28531	-19173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAATCAAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	101716603	101700409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101700512_101703030_101703201_101712512_101712678_101714415_101714643_101716566
ENSMUSG00000033083.17_101700410_101744845_1	chr14	-	1547	11	ISM	ENSMUSG00000033083.17	ENST00000648194.1	3976	18	289	19173	289	-19173	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAATCAAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	101744845	101700409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101700512_101703030_101703201_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447_101738553_101742543_101742634_101744523
ENSMUSG00000033083.17_101703031_101724984_1	chr14	-	758	5	ISM	ENSMUSG00000033083.17	ENST00000431480.6	4800	20	121081	21794	20150	-21794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCATCATTCAGGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	101724984	101703030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101703201_101712512_101712678_101714415_101714643_101716566_101716642_101724863
ENSMUSG00000033083.17_101703106_101745017_1	chr14	-	1542	10	ISM	ENSMUSG00000033083.17	ENST00000648194.1	3976	18	117	21869	117	-21869	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCGGATTTTCCTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	101745017	101703105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101703201_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447_101738553_101742543_101742634_101744523
ENSMUSG00000033083.17_101703151_101727020_1	chr14	-	710	6	ISM	ENSMUSG00000033083.17	ENST00000431480.6	4800	20	119045	21914	18114	-21914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGCCGGAGGAACCCCG	NA	NA	NA	NA	NA	NA	NA	NA	101727020	101703150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101703201_101712512_101712678_101714415_101714643_101716566_101716642_101724863_101724984_101726947
ENSMUSG00000033083.17_101712631_101731860_1	chr14	-	751	7	ISM	ENSMUSG00000033083.17	ENSMUST00000162617.8	4762	21	114062	31472	13274	-31394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCTTCCAAGCCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	101731860	101712630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101712678_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781
ENSMUSG00000033083.17_101731784_101744972_1	chr14	-	775	4	ISM	ENSMUSG00000033083.17	ENST00000648194.1	3976	18	162	50547	162	-50547	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTACCACAGAACATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	101744972	101731783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101731915_101738447_101738553_101742543_101742634_101744523
ENSMUSG00000033083.17_101744779_101845809_1	chr14	-	759	2	ISM	ENSMUSG00000033083.17	ENSMUST00000162617.8	4762	21	113	63620	113	-63542	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTAGCCTTCCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	101845809	101744778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_101745127_101845398
ENSMUSG00000033088.20_78867277_78886500_1	chr15	+	1525	11	ISM	ENSMUSG00000033088.20	ENSMUST00000109687.9	2570	14	36	3564	36	-3564	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCGAGGAGATCGACCGT	NA	NA	NA	NA	NA	NA	NA	NA	78867276	78886500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484
ENSMUSG00000033088.20_78867306_78886564_1	chr15	+	1560	11	ISM	ENSMUSG00000033088.20	ENSMUST00000109687.9	2570	14	65	3500	65	-3500	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCAGCAATGAGAGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	78867305	78886564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484
ENSMUSG00000033088.20_78875034_78888714_1	chr15	+	1574	11	ISM	ENSMUSG00000033088.20	ENSMUST00000109687.9	2570	14	7793	1350	7793	-1350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGATCGAGCAGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	78875033	78888714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644
ENSMUSG00000033088.20_78875561_78889489_1	chr15	+	1579	10	ISM	ENSMUSG00000033088.20	ENSMUST00000109687.9	2570	14	8320	575	8320	-575	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCACCCTGGGTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	78875560	78889489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644_78888806_78889401
ENSMUSG00000033088.20_78878289_78890067_1	chr15	+	1503	8	ISM	ENSMUSG00000033088.20	ENSMUST00000109687.9	2570	14	11048	-3	11048	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGTGGATGCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	78878288	78890067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644_78888806_78889401
ENSMUSG00000033096.8_150425222_150427741_1	chr2	-	946	2	ISM	ENSMUSG00000033096.8	ENSMUST00000046399.7	2235	9	22746	222	22746	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTCCACTGGAATTGGG	NA	NA	NA	NA	NA	NA	NA	NA	150427741	150425221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_150426109_150427682
ENSMUSG00000033096.8_150425389_150428340_1	chr2	-	953	3	ISM	ENSMUSG00000033096.8	ENSMUST00000046399.7	2235	9	22147	389	22147	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTCAGGGGCCGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	150428340	150425388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_150426109_150427682_150427876_150428300
ENSMUSG00000033096.8_150425499_150428435_1	chr2	-	938	3	ISM	ENSMUSG00000033096.8	ENSMUST00000046399.7	2235	9	22052	499	22052	-499	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACTTGTATCTTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	150428435	150425498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_150426109_150427682_150427876_150428300
ENSMUSG00000033096.8_150425748_150431989_1	chr2	-	1018	6	ISM	ENSMUSG00000033096.8	ENSMUST00000046399.7	2235	9	18498	748	18498	-748	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTACCCATACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	150431989	150425747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952
ENSMUSG00000033096.8_150426026_150442260_1	chr2	-	1009	8	ISM	ENSMUSG00000033096.8	ENSMUST00000046399.7	2235	9	8227	1026	8227	-1026	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGCATGATCCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	150442260	150426025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150442163
ENSMUSG00000033096.8_150427757_150450464_1	chr2	-	1029	8	ISM	ENSMUSG00000033096.8	ENSMUST00000046399.7	2235	9	23	2757	23	-2757	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGCTAACCCTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	150450464	150427756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150442163_150442281_150450307
ENSMUSG00000033099.11_78819133_78826319_1	chr15	+	2202	6	FSM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	0	1519	0	-1519	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACAACTAGTTTGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	78819132	78826319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_78819276_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
ENSMUSG00000033099.11_78819195_78826371_1	chr15	+	2192	6	FSM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	62	1467	62	-1467	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGCTGGGAAAGCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	78819194	78826371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_78819276_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
ENSMUSG00000033099.11_78819195_78826423_1	chr15	+	2244	6	FSM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	62	1415	62	-1415	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAACTTGGCCTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	78819194	78826423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_78819276_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
ENSMUSG00000033099.11_78820770_78826528_1	chr15	+	2177	5	ISM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	1637	1310	1637	-1310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGAAACCTTGACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	78820769	78826528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
ENSMUSG00000033099.11_78822101_78826682_1	chr15	+	2174	3	ISM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	2968	1156	2968	-1156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAGCCAGGGCTACACAG	NA	NA	NA	NA	NA	NA	NA	NA	78822100	78826682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78822151_78824265_78824367_78824659
ENSMUSG00000033099.11_78824342_78826833_1	chr15	+	2199	2	ISM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	5209	1005	5209	-1005	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGCTAGCAGACTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	78824341	78826833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78824367_78824659
ENSMUSG00000033106.7_106927350_106930974_1	chr8	-	565	3	ISM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	6591	1	6591	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCCCTGGTGGTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	106930974	106927349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106927782_106928862_106928984_106930962
ENSMUSG00000033106.7_106927511_106937055_1	chr8	-	661	4	ISM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	510	162	510	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCAAACACGCTGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	106937055	106927510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996
ENSMUSG00000033106.7_106927637_106937180_1	chr8	-	660	4	ISM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	385	288	385	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTCTTCCATGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	106937180	106927636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996
ENSMUSG00000033107.7_21107386_21116645_1	chr18	+	911	5	ISM	ENSMUSG00000033107.7	ENSMUST00000234316.2	1406	6	12857	136	12857	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTATTCAAATTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	21107385	21116645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
ENSMUSG00000033114.12_64244122_64277119_1	chr13	-	2253	12	FSM	ENSMUSG00000033114.12	ENSMUST00000099441.6	2303	12	50	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTATGGTTTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	64277119	64244121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64268408_64268496_64270132_64270167_64276999
ENSMUSG00000033124.17_75157509_75159622_1	chr1	-	1298	3	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	8945	-1	8945	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGGCATCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75159622	75157508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75158576_75159235_75159382_75159537
ENSMUSG00000033124.17_75157509_75159683_1	chr1	-	1359	3	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	8884	-1	8884	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGGCATCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75159683	75157508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75158576_75159235_75159382_75159537
ENSMUSG00000033124.17_75157684_75161135_1	chr1	-	1297	4	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	7432	174	7432	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATGCTGGGATCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	75161135	75157683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099
ENSMUSG00000033124.17_75157792_75161366_1	chr1	-	1305	5	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	7201	282	7201	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGTGACCTCAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	75161366	75157791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332
ENSMUSG00000033124.17_75157858_75161410_1	chr1	-	1283	5	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	7157	348	7157	-348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTGTGAGGCCTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	75161410	75157857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332
ENSMUSG00000033124.17_75157911_75161491_1	chr1	-	1311	5	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	7076	401	7076	-401	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGGATGAAAATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	75161491	75157910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332
ENSMUSG00000033124.17_75158052_75161790_1	chr1	-	1284	6	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	6777	542	6777	-542	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGCTGCTTGACCACC	NA	NA	NA	NA	NA	NA	NA	NA	75161790	75158051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696
ENSMUSG00000033124.17_75158163_75161895_1	chr1	-	1278	6	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	6672	653	6672	-653	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCACCCTCCAGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	75161895	75158162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696
ENSMUSG00000033124.17_75158370_75162691_1	chr1	-	1398	8	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	5876	860	5876	-860	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTAGCTTCGTCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	75162691	75158369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594
ENSMUSG00000033124.17_75158436_75162691_1	chr1	-	1332	8	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	5876	926	5876	-926	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGAGGTGCCAATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	75162691	75158435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594
ENSMUSG00000033124.17_75158492_75162710_1	chr1	-	1295	8	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	5857	982	5857	-982	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTCTGAGTGTCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	75162710	75158491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594
ENSMUSG00000033124.17_75159270_75162921_1	chr1	-	1303	8	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	5646	1760	5646	-1760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGGATGAACTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	75162921	75159269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833
ENSMUSG00000033124.17_75159332_75162972_1	chr1	-	1292	8	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	5595	1822	5595	-1822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGATGGGCAGAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	75162972	75159331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833
ENSMUSG00000033124.17_75159634_75163161_1	chr1	-	1335	7	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	5406	2124	5406	-2124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGGCCAGCTATCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	75163161	75159633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833
ENSMUSG00000033124.17_75161136_75163278_1	chr1	-	1289	6	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	5289	3626	5289	-3626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGAGATGAGCCTGCACGC	NA	NA	NA	NA	NA	NA	NA	NA	75163278	75161135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833
ENSMUSG00000033124.17_75161193_75163327_1	chr1	-	1281	6	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	5240	3683	5240	-3683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGTAGCGTGTGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	75163327	75161192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833
ENSMUSG00000033124.17_75161780_75164365_1	chr1	-	1286	5	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	4202	4270	4202	-4270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTGGCCTGGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	75164365	75161779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328
ENSMUSG00000033124.17_75161846_75164409_1	chr1	-	1264	5	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	4158	4336	4158	-4336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCCCCTCGTGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	75164409	75161845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328
ENSMUSG00000033124.17_75161923_75164637_1	chr1	-	1297	6	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	3930	4413	3930	-4413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTCAGTGTACCAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	75164637	75161922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588
ENSMUSG00000033124.17_75162430_75166231_1	chr1	-	1292	6	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	2336	4920	2336	-4920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCCTCGGGCCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	75166231	75162429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206
ENSMUSG00000033124.17_75162684_75167026_1	chr1	-	1307	7	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	1541	5174	1541	-5174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCACTACATGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	75167026	75162683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946
ENSMUSG00000033124.17_75162729_75167078_1	chr1	-	1314	7	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	1489	5219	1489	-5219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGTTCTGCCCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	75167078	75162728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946
ENSMUSG00000033124.17_75162832_75168567_1	chr1	-	1322	7	ISM	ENSMUSG00000033124.17	ENST00000396761.6	3764	15	128	5323	0	-5322	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCAGGGCGGCGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	75168567	75162831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75168541
ENSMUSG00000033128.10_78761632_78769526_1	chr15	+	641	6	ISM	ENSMUSG00000033128.10	ENST00000325180.12	2403	15	-128	9259	-128	-9259	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATCTTTGAAGATGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	78761631	78769526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455
ENSMUSG00000033128.10_78761751_78778785_1	chr15	+	2410	15	NNC	ENSMUSG00000033128.10	novel	2403	15	NA	NA	-9	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	78761750	78778785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777740_78777850_78777933
ENSMUSG00000033128.10_78761751_78778785_2	chr15	+	2405	15	NNC	ENSMUSG00000033128.10	novel	2403	15	NA	NA	-9	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	599	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	78761750	78778785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78775643_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ENSMUSG00000033128.10_78761751_78778785_3	chr15	+	2406	15	NNC	ENSMUSG00000033128.10	novel	2403	15	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	78761750	78778785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772316_78772449_78772617_78772700_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ENSMUSG00000033128.10_78761751_78778785_4	chr15	+	2412	15	FSM	ENSMUSG00000033128.10	ENST00000325180.12	2403	15	-9	0	-9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	78761750	78778785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ENSMUSG00000033128.10_78761751_78778785_5	chr15	+	2405	15	NNC	ENSMUSG00000033128.10	novel	2403	15	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	78761750	78778785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78775636_78775702_78776120_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ENSMUSG00000033128.10_78761751_78778785_6	chr15	+	2411	15	NNC	ENSMUSG00000033128.10	novel	2403	15	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	78761750	78778785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78775636_78775702_78776113_78776287_78776652_78776841_78777367_78777537_78777738_78777850_78777933
ENSMUSG00000033128.10_78761751_78892519_1	chr15	+	2489	16	NNC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-9	113734	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATTTCCAGCAGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	78761750	78892519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933_78778786_78892442
ENSMUSG00000033128.10_78768343_78773986_1	chr15	+	647	7	ISM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	6953	4799	6583	-4799	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCCGCCCTGGCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	78768342	78773986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915
ENSMUSG00000033128.10_78770099_78776183_1	chr15	+	662	7	ISM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	8709	2602	8339	-2602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGCCCCTCCACCAACG	NA	NA	NA	NA	NA	NA	NA	NA	78770098	78776183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113
ENSMUSG00000033128.10_78772642_78776760_1	chr15	+	665	6	ISM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	11252	2025	10882	-2025	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCCTCCACCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	78772641	78776760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652
ENSMUSG00000033128.10_78773960_78777481_1	chr15	+	650	5	ISM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	12570	1304	12200	-1304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACGGCGCCCCAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	78773959	78777481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366
ENSMUSG00000033147.17_101787387_101822642_1	chr3	-	567	5	ISM	ENSMUSG00000033147.17	ENST00000369502.1	926	6	8805	68	8805	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGATCTTTTCCGTTA	NA	NA	NA	NA	NA	NA	NA	NA	101822642	101787386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_101787504_101790775_101790906_101804425_101804591_101805252_101805386_101822620
ENSMUSG00000033147.17_101787419_101822711_1	chr3	-	604	5	ISM	ENSMUSG00000033147.17	ENST00000369502.1	926	6	8736	100	8736	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1612	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCCAACAGGAGCTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	101822711	101787418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_101787504_101790775_101790906_101804425_101804591_101805252_101805386_101822620
ENSMUSG00000033147.17_101787473_101822758_1	chr3	-	597	5	ISM	ENSMUSG00000033147.17	ENST00000369502.1	926	6	8689	154	8689	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1091	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCATTGCCAAGAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	101822758	101787472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_101787504_101790775_101790906_101804425_101804591_101805252_101805386_101822620
ENSMUSG00000033147.17_101790887_101831392_1	chr3	-	575	5	ISM	ENSMUSG00000033147.17	ENST00000369502.1	926	6	55	3568	55	-3568	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	751	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGCTGTTGGCATCGCGC	NA	NA	NA	NA	NA	NA	NA	NA	101831392	101790886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_101790906_101804425_101804591_101805252_101805386_101822620_101822834_101831347
ENSMUSG00000033149.18_45566606_45600731_1	chr16	-	2741	9	ISM	ENSMUSG00000033149.18	ENST00000495180.1	3788	15	29998	13	29998	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGTGGAAACACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	45600731	45566605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45598075_45598166_45600618
ENSMUSG00000033149.18_45566757_45609482_1	chr16	-	2875	11	ISM	ENSMUSG00000033149.18	ENST00000495180.1	3788	15	21247	164	21247	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGTTGCTTGATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	45609482	45566756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45598075_45598166_45600618_45600730_45601664_45601821_45609351
ENSMUSG00000033149.18_45567021_45623144_1	chr16	-	2833	13	ISM	ENSMUSG00000033149.18	ENST00000495180.1	3788	15	7585	428	7585	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAGAAGTAGAAAACAATGT	NA	NA	NA	NA	NA	NA	NA	NA	45623144	45567020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058
ENSMUSG00000033149.18_45567109_45623157_1	chr16	-	2758	13	ISM	ENSMUSG00000033149.18	ENST00000495180.1	3788	15	7572	516	7572	-352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCATTTTTCAAGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	45623157	45567108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058
ENSMUSG00000033149.18_45567166_45623204_1	chr16	-	2748	13	ISM	ENSMUSG00000033149.18	ENST00000495180.1	3788	15	7525	573	7525	-409	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTTAGAGCTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	45623204	45567165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058
ENSMUSG00000033149.18_45567332_45628676_1	chr16	-	2768	14	ISM	ENSMUSG00000033149.18	ENST00000495180.1	3788	15	2053	739	2053	-575	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAGTGAACATGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	45628676	45567331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488
ENSMUSG00000033149.18_45567523_45630718_1	chr16	-	2847	15	FSM	ENSMUSG00000033149.18	ENST00000495180.1	3788	15	11	930	11	-766	multi-exon	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAACAAACAAAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	45630718	45567522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45630644
ENSMUSG00000033149.18_45595382_45621934_1	chr16	-	506	5	ISM	ENSMUSG00000033149.18	ENST00000393923.7	5194	16	24522	28789	8795	-28625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTGCTGATGCTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	45621934	45595381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45621854
ENSMUSG00000033149.18_45600698_45623204_1	chr16	-	472	4	ISM	ENSMUSG00000033149.18	ENST00000393923.7	5194	16	23252	34105	7525	-33941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATCGTTCAGCAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	45623204	45600697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45600730_45601664_45601821_45621854_45621993_45623058
ENSMUSG00000033149.18_45601664_45628514_1	chr16	-	465	4	ISM	ENSMUSG00000033149.18	ENST00000393923.7	5194	16	17942	35071	2215	-34907	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGCCAGGTGATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	45628514	45601663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45601821_45621854_45621993_45623058_45623203_45628488
ENSMUSG00000033149.18_45601722_45628563_1	chr16	-	456	4	ISM	ENSMUSG00000033149.18	ENST00000393923.7	5194	16	17893	35129	2166	-34965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAACAGCTCCTGCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	45628563	45601721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45601821_45621854_45621993_45623058_45623203_45628488
ENSMUSG00000033149.18_45601772_45628617_1	chr16	-	460	4	ISM	ENSMUSG00000033149.18	ENST00000393923.7	5194	16	17839	35179	2112	-35015	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCAGCTTGAGCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	45628617	45601771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45601821_45621854_45621993_45623058_45623203_45628488
ENSMUSG00000033149.18_45623144_45664953_1	chr16	-	1832	4	ISM	ENSMUSG00000033149.18	ENST00000412622.5	5487	17	239	56551	-212	-56387	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGATGGTGATTCTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	45664953	45623143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45623203_45628488_45628873_45645121_45646459_45664901
ENSMUSG00000033149.18_45628579_45665091_1	chr16	-	1821	3	ISM	ENSMUSG00000033149.18	ENST00000412622.5	5487	17	101	61986	101	-61822	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGACCTCACTAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	45665091	45628578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45628873_45645121_45646459_45664901
ENSMUSG00000033149.18_45628607_45665165_1	chr16	-	1867	3	ISM	ENSMUSG00000033149.18	ENST00000412622.5	5487	17	27	62014	27	-61850	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGGGGCAGCAGGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	45665165	45628606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45628873_45645121_45646459_45664901
ENSMUSG00000033157.18_45552159_45560855_1	chr16	-	643	4	NNC	ENSMUSG00000033157.18	novel	656	4	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGATGAAATAGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	45560855	45552158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_45552379_45557255_45557394_45557887_45557999_45560681
ENSMUSG00000033157.18_45552159_45560855_2	chr16	-	638	4	NNC	ENSMUSG00000033157.18	novel	656	4	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGATGAAATAGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	45560855	45552158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_45552379_45557261_45557394_45557886_45557999_45560681
ENSMUSG00000033157.18_45552159_45560855_3	chr16	-	644	4	FSM	ENSMUSG00000033157.18	ENST00000494817.1	656	4	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGATGAAATAGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	45560855	45552158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_45552379_45557255_45557394_45557886_45557999_45560681
ENSMUSG00000033157.18_45552159_45560855_4	chr16	-	634	4	NNC	ENSMUSG00000033157.18	novel	656	4	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGATGAAATAGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	45560855	45552158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_45552369_45557255_45557394_45557886_45557999_45560681
ENSMUSG00000033159.15_75112412_75116244_1	chr1	-	1516	5	ISM	ENSMUSG00000033159.15	ENSMUST00000190679.7	2062	8	2091	0	2091	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTTTTCCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	75116244	75112411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202
ENSMUSG00000033159.15_75112412_75116288_1	chr1	-	1560	5	ISM	ENSMUSG00000033159.15	ENSMUST00000190679.7	2062	8	2047	0	2047	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTTTTCCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	75116288	75112411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202
ENSMUSG00000033159.15_75112624_75117568_1	chr1	-	1492	7	ISM	ENSMUSG00000033159.15	ENSMUST00000190679.7	2062	8	767	212	767	-209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGACCAGGAAGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	75117568	75112623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541
ENSMUSG00000033159.15_75112696_75117608_1	chr1	-	1460	7	ISM	ENSMUSG00000033159.15	ENSMUST00000190679.7	2062	8	727	284	727	-281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAGCGGAGGAGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	75117608	75112695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541
ENSMUSG00000033159.15_75112856_75118195_1	chr1	-	1478	8	FSM	ENSMUSG00000033159.15	ENSMUST00000190679.7	2062	8	140	444	140	-441	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCTAGGACACCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	75118195	75112855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059
ENSMUSG00000033159.15_75112923_75118335_1	chr1	-	1551	8	FSM	ENSMUSG00000033159.15	ENSMUST00000190679.7	2062	8	0	511	0	-508	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAGCATAAGGGATTATG	NA	NA	NA	NA	NA	NA	NA	NA	75118335	75112922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059
ENSMUSG00000033159.15_75118114_75119025_1	chr1	-	358	2	ISM	ENSMUSG00000033159.15	ENSMUST00000041213.12	2429	10	316	5699	257	-5699	internal_fragment	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGCTGGACGAAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	75119025	75118113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_75118148_75118701
ENSMUSG00000033166.12_99313551_99316722_1	chr14	-	1633	3	ISM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	20484	909	20484	-909	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGTAATTGTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	99316722	99313550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_99314902_99315697_99315821_99316563
ENSMUSG00000033166.12_99314070_99320155_1	chr14	-	1725	7	ISM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	17051	1428	17051	-1428	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGGTGTGCCAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	99320155	99314069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085
ENSMUSG00000033166.12_99321502_99336366_1	chr14	-	1706	13	ISM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	840	8860	840	-8860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGCTAAAATTCTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	99336366	99321501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118
ENSMUSG00000033174.18_88702059_88804043_1	chr6	+	2229	7	FSM	ENSMUSG00000033174.18	ENST00000453507.6	2255	7	26	0	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTCGATGCATGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	88702058	88804043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_88702161_88702682_88702828_88741577_88741685_88784992_88785130_88786317_88786429_88800172_88800389_88802632
ENSMUSG00000033177.14_45476823_45478509_1	chr16	-	223	2	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	28295	84	28295	-84	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCAAGCTTTGTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	45478509	45476822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45476942_45478405
ENSMUSG00000033177.14_45476875_45481029_1	chr16	-	231	3	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	25775	136	25775	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCTGGGGACATGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	45481029	45476874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45476942_45478405_45478543_45481002
ENSMUSG00000033177.14_45478450_45481138_1	chr16	-	229	2	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	25666	1711	25666	-1711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGTGCAGGGGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	45481138	45478449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45478543_45481002
ENSMUSG00000033177.14_45478506_45481184_1	chr16	-	219	2	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	25620	1767	25620	-1767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCTCATAGATCAAACCG	NA	NA	NA	NA	NA	NA	NA	NA	45481184	45478505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45478543_45481002
ENSMUSG00000033177.14_45481188_45482659_1	chr16	-	227	2	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	24145	4449	24145	-4449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTCCATGAATACTACA	NA	NA	NA	NA	NA	NA	NA	NA	45482659	45481187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45481272_45482516
ENSMUSG00000033177.14_45482640_45484582_1	chr16	-	214	3	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	22222	5901	22222	-5901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGGAGGGGACCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	45484582	45482639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45482689_45483631_45483749_45484534
ENSMUSG00000033177.14_45483697_45487970_1	chr16	-	219	3	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	18834	6958	18834	-6958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCAAAATGCACAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	45487970	45483696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45483749_45484534_45484646_45487914
ENSMUSG00000033177.14_45484593_45489873_1	chr16	-	219	3	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	16931	7854	16931	-7854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGATGGCTTCCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	45489873	45484592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45484646_45487914_45488023_45489815
ENSMUSG00000033177.14_45487979_45494270_1	chr16	-	216	3	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	12534	11240	12534	-11240	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGCCCAGCGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	45494270	45487978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45488023_45489815_45489953_45494235
ENSMUSG00000033177.14_45489907_45498272_1	chr16	-	209	3	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	8532	13168	8532	-13168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCCTGGTCCACATCCA	NA	NA	NA	NA	NA	NA	NA	NA	45498272	45489906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45489953_45494235_45494343_45498216
ENSMUSG00000033177.14_45494276_45499673_1	chr16	-	229	3	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	7131	17537	7131	-17537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGAGCACGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	45499673	45494275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45494343_45498216_45498330_45499624
ENSMUSG00000033177.14_45498296_45500926_1	chr16	-	209	3	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	5878	21557	5878	-21557	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTTTGAGGGGAAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	45500926	45498295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45498330_45499624_45499756_45500882
ENSMUSG00000033177.14_45500936_45503809_1	chr16	-	214	2	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	2995	24197	2995	-24197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTGTTTATGACTC	NA	NA	NA	NA	NA	NA	NA	NA	45503809	45500935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45501112_45503771
ENSMUSG00000033177.14_45501039_45503926_1	chr16	-	228	2	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	2878	24300	2878	-24300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACAACTAATGTGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	45503926	45501038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45501112_45503771
ENSMUSG00000033177.14_45503886_45506750_1	chr16	-	225	3	ISM	ENSMUSG00000033177.14	ENSMUST00000114562.3	2587	18	7271	27208	54	-27147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGTGTGGCGGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	45506750	45503885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_45503966_45504933_45505002_45506673
ENSMUSG00000033186.10_99273705_99283529_1	chr14	-	488	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	27	1725	0	-483	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTGCCACACTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	99283529	99273704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_99273947_99277950_99278097_99283429
ENSMUSG00000033191.15_118328590_118333382_1	chr4	-	1051	9	ISM	ENSMUSG00000033191.15	ENSMUST00000047421.6	4091	23	13876	202	10479	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGGAAAAGGGGGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	118333382	118328589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118328790_118329768_118329869_118329988_118330086_118330164_118330206_118331306_118331378_118331496_118331611_118332620_118332812_118333007_118333119_118333256
ENSMUSG00000033191.15_118328745_118335630_1	chr4	-	1017	10	ISM	ENSMUSG00000033191.15	ENSMUST00000047421.6	4091	23	11628	357	8231	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGATGCCACAGCTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	118335630	118328744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118328790_118329768_118329869_118329988_118330086_118330164_118330206_118331306_118331378_118331496_118331611_118332620_118332812_118333007_118333119_118333256_118333468_118335594
ENSMUSG00000033191.15_118330023_118336137_1	chr4	-	1072	9	ISM	ENSMUSG00000033191.15	ENSMUST00000047421.6	4091	23	11121	1635	7724	-1432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGGAGCAGCCTCGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	118336137	118330022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118330086_118330164_118330206_118331306_118331378_118331496_118331611_118332620_118332812_118333007_118333119_118333256_118333468_118335594_118335786_118336058
ENSMUSG00000033191.15_118332657_118336894_1	chr4	-	1044	6	ISM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	6967	4066	6967	-4066	internal_fragment	TRUE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCCAACGGCATGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	118336894	118332656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118332812_118333007_118333119_118333256_118333468_118335594_118335786_118336058_118336350_118336809
ENSMUSG00000033191.15_118332752_118336965_1	chr4	-	1020	6	ISM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	6896	4161	6896	-4161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCAGGGTCCTGGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	118336965	118332751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118332812_118333007_118333119_118333256_118333468_118335594_118335786_118336058_118336350_118336809
ENSMUSG00000033191.15_118332790_118337030_1	chr4	-	1047	6	ISM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	6831	4199	6831	-4199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACGCCCCCTATGGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	118337030	118332789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118332812_118333007_118333119_118333256_118333468_118335594_118335786_118336058_118336350_118336809
ENSMUSG00000033191.15_118333291_118337388_1	chr4	-	1040	5	ISM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	6473	4700	6473	-4700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAGATGAACGCAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	118337388	118333290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118333468_118335594_118335786_118336058_118336350_118336809_118337101_118337298
ENSMUSG00000033191.15_118333408_118337685_1	chr4	-	1049	6	ISM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	6176	4817	6176	-4817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGCCTGAGCCCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	118337685	118333407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118333468_118335594_118335786_118336058_118336350_118336809_118337101_118337298_118337437_118337607
ENSMUSG00000033191.15_118335709_118339516_1	chr4	-	1020	6	ISM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	4345	7118	4345	-7118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTTCCGTCTCTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	118339516	118335708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118335786_118336058_118336350_118336809_118337101_118337298_118337437_118337607_118337767_118339452
ENSMUSG00000033191.15_118336218_118340969_1	chr4	-	1037	7	ISM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	2892	7627	2892	-7627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGACCCACAGTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	118340969	118336217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118336350_118336809_118337101_118337298_118337437_118337607_118337767_118339452_118339598_118339843_118339990_118340943
ENSMUSG00000033191.15_118336282_118341023_1	chr4	-	1027	7	ISM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	2838	7691	2838	-7691	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCGAGGCTCCGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	118341023	118336281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118336350_118336809_118337101_118337298_118337437_118337607_118337767_118339452_118339598_118339843_118339990_118340943
ENSMUSG00000033191.15_118336833_118341295_1	chr4	-	1008	7	ISM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	2566	8242	2566	-8242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCACCTGCCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	118341295	118336832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118337101_118337298_118337437_118337607_118337767_118339452_118339598_118339843_118339990_118340943_118341073_118341272
ENSMUSG00000033191.15_118336876_118341358_1	chr4	-	1028	7	ISM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	2503	8285	2503	-8285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTATCACTGTACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	118341358	118336875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118337101_118337298_118337437_118337607_118337767_118339452_118339598_118339843_118339990_118340943_118341073_118341272
ENSMUSG00000033191.15_118337018_118341659_1	chr4	-	1056	8	ISM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	2202	8427	2202	-8427	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCCGGTGATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	118341659	118337017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118337101_118337298_118337437_118337607_118337767_118339452_118339598_118339843_118339990_118340943_118341073_118341272_118341414_118341544
ENSMUSG00000033191.15_118337328_118341862_1	chr4	-	1010	8	ISM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	1999	8737	1999	-8737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCCCTTATGACTACTG	NA	NA	NA	NA	NA	NA	NA	NA	118341862	118337327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118337437_118337607_118337767_118339452_118339598_118339843_118339990_118340943_118341073_118341272_118341414_118341544_118341677_118341813
ENSMUSG00000033191.15_118337394_118341897_1	chr4	-	979	8	ISM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	1964	8803	1964	-8803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGGATACAATGTCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	118341897	118337393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118337437_118337607_118337767_118339452_118339598_118339843_118339990_118340943_118341073_118341272_118341414_118341544_118341677_118341813
ENSMUSG00000033191.15_118337608_118343494_1	chr4	-	1119	8	ISM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	367	9017	367	-9017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGGGACAGAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	118343494	118337607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118337767_118339452_118339598_118339843_118339990_118340943_118341073_118341272_118341414_118341544_118341677_118341813_118341970_118343383
ENSMUSG00000033191.15_118339456_118343656_1	chr4	-	1040	8	ISM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	205	10865	205	-10865	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGAGTGGTGTTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	118343656	118339455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118339598_118339843_118339990_118340943_118341073_118341272_118341414_118341544_118341677_118341813_118341970_118343383_118343495_118343573
ENSMUSG00000033191.15_118339517_118343706_1	chr4	-	1029	8	ISM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	155	10926	155	-10926	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAATGCCGCGTATCGAC	NA	NA	NA	NA	NA	NA	NA	NA	118343706	118339516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118339598_118339843_118339990_118340943_118341073_118341272_118341414_118341544_118341677_118341813_118341970_118343383_118343495_118343573
ENSMUSG00000033191.15_118339577_118343756_1	chr4	-	1019	8	ISM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	105	10986	105	-10986	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGACAGGACCACAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	118343756	118339576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_118339598_118339843_118339990_118340943_118341073_118341272_118341414_118341544_118341677_118341813_118341970_118343383_118343495_118343573
ENSMUSG00000033192.6_93582108_93640964_2	chr8	+	1383	13	ISM	ENSMUSG00000033192.6	ENST00000262134.10	1599	14	25	4627	25	-4487	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTTCAGAGAAATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	93582107	93640964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_93582254_93591528_93591669_93596275_93596494_93597765_93597879_93599675_93599737_93600860_93600920_93602182_93602218_93606027_93606083_93613193_93613277_93615900_93616027_93617300_93617455_93635814_93635914_93640870
ENSMUSG00000033192.6_93582108_93645451_1	chr8	+	1434	14	FSM	ENSMUSG00000033192.6	ENST00000262134.10	1599	14	25	140	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCCTTATTGAAGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	93582107	93645451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_93582254_93591528_93591669_93596275_93596494_93597765_93597879_93599675_93599737_93600860_93600920_93602182_93602218_93606027_93606083_93613193_93613277_93615900_93616027_93617300_93617455_93635814_93635914_93640870_93640965_93645400
ENSMUSG00000033192.6_93591524_93645591_1	chr8	+	1433	13	ISM	ENSMUSG00000033192.6	ENST00000262134.10	1599	14	9441	0	9441	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAATTGGTGTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	93591523	93645591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_93591669_93596275_93596494_93597765_93597879_93599675_93599737_93600860_93600920_93602182_93602218_93606027_93606083_93613193_93613277_93615900_93616027_93617300_93617455_93635814_93635914_93640870_93640965_93645400
ENSMUSG00000033192.6_93596274_93645591_1	chr8	+	1290	12	ISM	ENSMUSG00000033192.6	ENST00000262134.10	1599	14	14191	0	14191	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAATTGGTGTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	93596273	93645591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_93596494_93597765_93597879_93599675_93599737_93600860_93600920_93602182_93602218_93606027_93606083_93613193_93613277_93615900_93616027_93617300_93617455_93635814_93635914_93640870_93640965_93645400
ENSMUSG00000033192.6_93596274_93645591_2	chr8	+	1285	12	NNC	ENSMUSG00000033192.6	novel	1599	14	NA	NA	14191	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAATTGGTGTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	93596273	93645591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_93596494_93597765_93597879_93599675_93599737_93600860_93600920_93602182_93602218_93606027_93606083_93613193_93613277_93615900_93616027_93617305_93617455_93635814_93635914_93640870_93640965_93645400
ENSMUSG00000033210.17_45363488_45413855_1	chr16	+	2586	19	FSM	ENSMUSG00000033210.17	ENST00000487372.5	2586	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAACAGCTCCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	45363487	45413855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_45363620_45365052_45365219_45367962_45368089_45370436_45370599_45373261_45373362_45375997_45376173_45376948_45377031_45378504_45378672_45380581_45380708_45393690_45393789_45395680_45395801_45398086_45398283_45400437_45400624_45401846_45401997_45403316_45403369_45404703_45404853_45409864_45409991_45411153_45411253_45413681
ENSMUSG00000033213.17_122479968_122483005_1	chr2	+	618	4	FSM	ENSMUSG00000033213.17	ENSMUST00000110512.4	751	4	133	0	133	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGATTTGTGCAAGAGATA	NA	NA	NA	NA	NA	NA	NA	NA	122479967	122483005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_122480054_122480176_122480263_122481135_122481197_122482620
ENSMUSG00000033214.11_111913573_111917216_1	chr14	+	987	2	ISM	ENSMUSG00000033214.11	ENST00000325089.7	4494	3	62	4085	62	-3357	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGAACTTTGTCCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	111913572	111917216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_111913713_111916369
ENSMUSG00000033214.11_111913623_111917277_1	chr14	+	998	2	ISM	ENSMUSG00000033214.11	ENST00000325089.7	4494	3	112	4024	112	-3296	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACCACGGGGTATCTACA	NA	NA	NA	NA	NA	NA	NA	NA	111913622	111917277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_111913713_111916369
ENSMUSG00000033216.10_88234316_88258688_1	chr6	-	1216	2	ISM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	164833	0	164821	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGTGATCAAATGACTT	NA	NA	NA	NA	NA	NA	NA	NA	88258688	88234315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88235374_88258530
ENSMUSG00000033216.10_88234471_88274630_1	chr6	-	1132	3	ISM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	148891	155	148879	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCAGAGCTTTTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	88274630	88234470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88235374_88258530_88258688_88274558
ENSMUSG00000033216.10_88234519_88274688_1	chr6	-	1142	3	ISM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	148833	203	148821	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGGGGACTGAGATAGG	NA	NA	NA	NA	NA	NA	NA	NA	88274688	88234518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88235374_88258530_88258688_88274558
ENSMUSG00000033216.10_88235011_88275173_1	chr6	-	1135	3	ISM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	148348	695	148336	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCCCTGAACCCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	88275173	88235010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88235374_88258530_88258688_88274558
ENSMUSG00000033216.10_88235255_88335624_1	chr6	-	1198	5	ISM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	87897	939	87885	-400	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGACACTCAACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	88335624	88235254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527
ENSMUSG00000033216.10_88258634_88353393_1	chr6	-	1184	5	ISM	ENSMUSG00000033216.10	ENSMUST00000205179.3	2208	8	70116	23779	70116	-23779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCAGCTCTTTGTGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	88353393	88258633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185
ENSMUSG00000033216.10_88274905_88423466_1	chr6	-	1063	5	ISM	ENSMUSG00000033216.10	ENSMUST00000205179.3	2208	8	43	40050	43	-40050	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCTTTCCCGAGAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	88423466	88274904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ENSMUSG00000033228.9_96311810_96313784_1	chr15	-	1233	3	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	4944	-273	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGCAGCTCCGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	96313784	96311809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_96312798_96312912_96313031_96313657
ENSMUSG00000033228.9_96311912_96314787_1	chr15	-	1233	4	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	3941	-375	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTCTATTTATCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	96314787	96311911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_96312798_96312912_96313031_96313657_96313829_96314729
ENSMUSG00000033228.9_96311968_96314836_1	chr15	-	1226	4	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	3892	-431	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAATTTAGAAGACTAAC	NA	NA	NA	NA	NA	NA	NA	NA	96314836	96311967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_96312798_96312912_96313031_96313657_96313829_96314729
ENSMUSG00000033228.9_96312085_96314963_1	chr15	-	1236	4	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	3765	-548	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCACCAGGTAAAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	96314963	96312084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_96312798_96312912_96313031_96313657_96313829_96314729
ENSMUSG00000033228.9_96312331_96316098_1	chr15	-	1243	5	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	2630	333	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTATCTATGTACAATAG	NA	NA	NA	NA	NA	NA	NA	NA	96316098	96312330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_96312798_96312912_96313031_96313657_96313829_96314729_96315071_96315952
ENSMUSG00000033228.9_96312453_96316306_1	chr15	-	1329	5	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	2422	211	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTAATGGGATGTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	96316306	96312452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_96312798_96312912_96313031_96313657_96313829_96314729_96315071_96315952
ENSMUSG00000033228.9_96312664_96317889_1	chr15	-	2670	6	FSM	ENSMUSG00000033228.9	ENST00000549162.5	3509	6	839	0	839	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGAGCACTGCCCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	96317889	96312663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96317534_96317614
ENSMUSG00000033228.9_96312664_96317951_1	chr15	-	2732	6	FSM	ENSMUSG00000033228.9	ENST00000549162.5	3509	6	777	0	777	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGAGCACTGCCCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	96317951	96312663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96317534_96317614
ENSMUSG00000033228.9_96312677_96317982_1	chr15	-	2750	6	FSM	ENSMUSG00000033228.9	ENST00000549162.5	3509	6	746	13	746	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTAGGCTGACCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	96317982	96312676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96317534_96317614
ENSMUSG00000033228.9_96312712_96318009_1	chr15	-	2742	6	FSM	ENSMUSG00000033228.9	ENST00000549162.5	3509	6	719	48	719	-48	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAGCTCTGGAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	96318009	96312711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96317534_96317614
ENSMUSG00000033228.9_96312735_96318026_1	chr15	-	2736	6	FSM	ENSMUSG00000033228.9	ENST00000549162.5	3509	6	702	71	702	-71	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGACAAGTACAGATACTC	NA	NA	NA	NA	NA	NA	NA	NA	96318026	96312734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96317534_96317614
ENSMUSG00000033228.9_96312997_96318179_1	chr15	-	2742	5	ISM	ENSMUSG00000033228.9	ENST00000549162.5	3509	6	549	333	549	-333	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCTATTAAGCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	96318179	96312996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96313033_96313609_96313829_96314729_96315071_96315952_96317534_96317614
ENSMUSG00000033228.9_96313718_96318326_1	chr15	-	2745	4	ISM	ENSMUSG00000033228.9	ENST00000549162.5	3509	6	402	1054	402	-1054	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCGTCATCAAGTCACGT	NA	NA	NA	NA	NA	NA	NA	NA	96318326	96313717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96313829_96314729_96315071_96315952_96317534_96317614
ENSMUSG00000033228.9_96313775_96318381_1	chr15	-	2743	4	ISM	ENSMUSG00000033228.9	ENST00000549162.5	3509	6	347	1111	347	-1111	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATCAGCAGCCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	96318381	96313774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96313829_96314729_96315071_96315952_96317534_96317614
ENSMUSG00000033228.9_96314822_96318503_1	chr15	-	2719	3	ISM	ENSMUSG00000033228.9	ENST00000549162.5	3509	6	225	2158	225	-2158	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACCTCAGGGACCGCCG	NA	NA	NA	NA	NA	NA	NA	NA	96318503	96314821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96315071_96315952_96317534_96317614
ENSMUSG00000033228.9_96314895_96318575_1	chr15	-	2718	3	ISM	ENSMUSG00000033228.9	ENST00000549162.5	3509	6	153	2231	153	-2231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCATGCACCCTCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	96318575	96314894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96315071_96315952_96317534_96317614
ENSMUSG00000033228.9_96318186_96341936_1	chr15	-	1269	9	ISM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	16788	6649	8	-5522	internal_fragment	TRUE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGAGGAGCAAACAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	96341936	96318185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825
ENSMUSG00000033228.9_96318529_96358681_1	chr15	-	1254	11	ISM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	43	6992	43	-5865	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCCAGGGAATAGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	96358681	96318528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ENSMUSG00000033228.9_96335876_96341936_1	chr15	-	467	2	FSM	ENSMUSG00000033228.9	ENST00000395454.6	566	2	8	91	8	-91	multi-exon	FALSE	canonical	NA	NA	NA	NA	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATGGAACTAATTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	96341936	96335875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_96336232_96341825
ENSMUSG00000033253.19_118259600_118266472_1	chr4	-	571	4	NNC	ENSMUSG00000033253.19	novel	579	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGACATCTTCTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	118266472	118259599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_118259771_118260017_118260186_118262622_118262742_118266359
ENSMUSG00000033253.19_118259600_118266472_2	chr4	-	578	4	FSM	ENSMUSG00000033253.19	ENST00000372450.8	579	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGACATCTTCTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	118266472	118259599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_118259771_118260017_118260186_118262622_118262749_118266359
ENSMUSG00000033256.15_122184061_122199313_2	chr2	-	1150	6	NIC	ENSMUSG00000033256.15	novel	1452	6	NA	NA	86	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGTGGAAGCACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	122199313	122184060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_122184366_122184509_122184679_122185955_122186097_122187563_122187771_122189928_122190071_122199127
ENSMUSG00000033256.15_122184245_122199618_2	chr2	-	1271	6	NIC	ENSMUSG00000033256.15	novel	1452	6	NA	NA	-1	-184	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTAGGGGTGGCGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	122199618	122184244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_122184366_122184509_122184679_122185955_122186097_122187563_122187771_122189928_122190071_122199127
ENSMUSG00000033268.9_122158428_122160185_1	chr2	+	390	3	ISM	ENSMUSG00000033268.9	ENST00000561166.1	3888	24	3921	17954	3921	-17954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCAGGCACCTTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	122158427	122160185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122158455_122159170_122159371_122160022
ENSMUSG00000033268.9_122159337_122163662_1	chr2	+	391	3	ISM	ENSMUSG00000033268.9	ENST00000561166.1	3888	24	4830	14477	4830	-14477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTACCTGTCCTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	122159336	122163662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122159371_122160022_122160209_122163491
ENSMUSG00000033268.9_122160124_122163959_1	chr2	+	388	3	ISM	ENSMUSG00000033268.9	ENST00000561166.1	3888	24	5617	14180	5617	-14180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTAGGATGCTAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	122160123	122163959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122160209_122163491_122163718_122163882
ENSMUSG00000033268.9_122163657_122166371_1	chr2	+	386	4	ISM	ENSMUSG00000033268.9	ENST00000561166.1	3888	24	9150	11768	9150	-11768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGAGAAGATCTGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	122163656	122166371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122163718_122163882_122163977_122164183_122164360_122166316
ENSMUSG00000033268.9_122163907_122166855_1	chr2	+	401	4	ISM	ENSMUSG00000033268.9	ENST00000561166.1	3888	24	9400	11284	9400	-11284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGACCCTCCTCAAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	122163906	122166855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122163977_122164183_122164360_122166316_122166387_122166770
ENSMUSG00000033268.9_122164303_122167860_1	chr2	+	381	4	ISM	ENSMUSG00000033268.9	ENST00000561166.1	3888	24	9796	10279	9796	-10279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGGTGTTTTACACCATC	NA	NA	NA	NA	NA	NA	NA	NA	122164302	122167860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122164360_122166316_122166387_122166770_122166897_122167732
ENSMUSG00000033268.9_122166865_122168270_1	chr2	+	412	3	ISM	ENSMUSG00000033268.9	ENST00000561166.1	3888	24	12358	9869	12358	-9869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGCCTCCACGGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	122166864	122168270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122166897_122167732_122167912_122168069
ENSMUSG00000033268.9_122168108_122170605_1	chr2	+	393	4	ISM	ENSMUSG00000033268.9	ENST00000561166.1	3888	24	13601	7534	13601	-7534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCACCACTTCCGCCG	NA	NA	NA	NA	NA	NA	NA	NA	122168107	122170605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122168301_122168797_122168898_122169105_122169156_122170555
ENSMUSG00000033268.9_122170663_122175285_1	chr2	+	401	3	ISM	ENSMUSG00000033268.9	ENST00000561166.1	3888	24	16156	2854	16156	-2854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAAGGTGCCCTGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	122170662	122175285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122170684_122174545_122174700_122175059
ENSMUSG00000033268.9_122174601_122175584_1	chr2	+	394	3	ISM	ENSMUSG00000033268.9	ENST00000561166.1	3888	24	20094	2555	20094	-2555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTAGGAGGGGGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	122174600	122175584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122174700_122175059_122175293_122175522
ENSMUSG00000033268.9_122175115_122176786_1	chr2	+	395	3	ISM	ENSMUSG00000033268.9	ENST00000561166.1	3888	24	20608	1353	20608	-1353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGGGAGGTGGAGGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	122175114	122176786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122175293_122175522_122175682_122176728
ENSMUSG00000033268.9_122175565_122177083_1	chr2	+	378	3	ISM	ENSMUSG00000033268.9	ENST00000561166.1	3888	24	21058	1056	21058	-1056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCAGGAAGTCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	122175564	122177083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122175682_122176728_122176885_122176978
ENSMUSG00000033268.9_122176787_122177905_1	chr2	+	382	3	ISM	ENSMUSG00000033268.9	ENST00000561166.1	3888	24	22280	234	22280	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGGGACAGCAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	122176786	122177905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_122176885_122176978_122177108_122177750
ENSMUSG00000033272.13_36812424_36815276_1	chr18	+	1048	3	FSM	ENSMUSG00000033272.13	ENSMUST00000185899.2	312	3	-238	-498	156	498	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGCACTGTGCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	36812423	36815276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_36812677_36813568_36813668_36814580
ENSMUSG00000033272.13_36813567_36815476_1	chr18	+	997	2	ISM	ENSMUSG00000033272.13	ENSMUST00000185899.2	312	3	905	-698	905	698	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATTTATCTGCAGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	36813566	36815476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36813668_36814580
ENSMUSG00000033272.13_36813597_36815558_1	chr18	+	1049	2	ISM	ENSMUSG00000033272.13	ENSMUST00000185899.2	312	3	935	-780	935	780	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCCTCTGCCTTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	36813596	36815558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36813668_36814580
ENSMUSG00000033272.13_36813602_36815974_1	chr18	+	1352	3	ISM	ENSMUSG00000033272.13	ENSMUST00000050476.11	2362	4	970	932	940	-932	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTCATGAAGCATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	36813601	36815974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36813668_36814580_36814819_36814926
ENSMUSG00000033272.13_36814646_36816096_1	chr18	+	1343	2	ISM	ENSMUSG00000033272.13	ENSMUST00000050476.11	2362	4	2014	810	1984	-810	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCACTGCTCATCGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	36814645	36816096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36814819_36814926
ENSMUSG00000033272.13_36814680_36816178_1	chr18	+	1391	2	ISM	ENSMUSG00000033272.13	ENSMUST00000050476.11	2362	4	2048	728	2018	-728	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGATTAAATGCAACCACC	NA	NA	NA	NA	NA	NA	NA	NA	36814679	36816178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36814819_36814926
ENSMUSG00000033282.15_91946331_91948091_1	chr8	-	679	2	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	88965	3014	88965	-2673	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATATGAAAATTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	91948091	91946330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91946918_91947999
ENSMUSG00000033282.15_91946506_91951941_1	chr8	-	607	3	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	85115	3189	85115	-2848	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTATGAAGAACTAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	91951941	91946505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91946918_91947999_91948134_91951880
ENSMUSG00000033282.15_91946624_91959514_1	chr8	-	592	4	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	77542	3307	77542	-2966	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAATCCTCCCCATGACT	NA	NA	NA	NA	NA	NA	NA	NA	91959514	91946623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91946918_91947999_91948134_91951880_91951966_91959435
ENSMUSG00000033282.15_91946669_91959574_1	chr8	-	607	4	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	77482	3352	77482	-3011	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTTCAAGTTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	91959574	91946668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91946918_91947999_91948134_91951880_91951966_91959435
ENSMUSG00000033282.15_91946807_91977798_1	chr8	-	606	6	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	59258	3490	59258	-3149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAACCTGTTCCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	91977798	91946806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91946918_91947999_91948134_91951880_91951966_91959435_91959620_91975336_91975408_91977777
ENSMUSG00000033282.15_91946858_91977856_1	chr8	-	613	6	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	59200	3541	59200	-3200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCCCTACGGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	91977856	91946857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91946918_91947999_91948134_91951880_91951966_91959435_91959620_91975336_91975408_91977777
ENSMUSG00000033282.15_91948079_91979536_1	chr8	-	607	6	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	57520	4762	57520	-4421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACATTGGGGTTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	91979536	91948078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91948134_91951880_91951966_91959435_91959620_91975336_91975408_91977777_91977932_91979478
ENSMUSG00000033282.15_91951910_91979753_1	chr8	-	603	6	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	57303	8593	57303	-8252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAAAGGCGAGAACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	91979753	91951909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91951966_91959435_91959620_91975336_91975408_91977777_91977932_91979478_91979567_91979703
ENSMUSG00000033282.15_91979478_91987751_1	chr8	-	659	3	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	49305	36161	49305	-35820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGAATACCCCAAATACC	NA	NA	NA	NA	NA	NA	NA	NA	91987751	91979477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91979567_91979703_91979895_91987372
ENSMUSG00000033282.15_91979717_91990219_1	chr8	-	640	3	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	46837	36400	46837	-36059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCAGTTGTAGTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	91990219	91979716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91979895_91987372_91987752_91990136
ENSMUSG00000033282.15_91979863_91996760_1	chr8	-	597	4	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	40296	36546	40296	-36205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCAGGAACTATCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	91996760	91979862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91979895_91987372_91987752_91990136_91990289_91996726
ENSMUSG00000033282.15_91987403_91996834_1	chr8	-	609	3	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	40222	44086	40222	-43745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCTGGCACATGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	91996834	91987402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91987752_91990136_91990289_91996726
ENSMUSG00000033282.15_91987471_91996895_1	chr8	-	602	3	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	40161	44154	40161	-43813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGTTTTTGATGATA	NA	NA	NA	NA	NA	NA	NA	NA	91996895	91987470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91987752_91990136_91990289_91996726
ENSMUSG00000033282.15_91987526_91996946_1	chr8	-	598	3	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	40110	44209	40110	-43868	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGTGCCGATGAATATG	NA	NA	NA	NA	NA	NA	NA	NA	91996946	91987525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91987752_91990136_91990289_91996726
ENSMUSG00000033282.15_91996769_92000986_1	chr8	-	598	3	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	36070	53452	36070	-53111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAAAAGTGGTAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	92000986	91996768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91997180_92000238_92000357_92000917
ENSMUSG00000033282.15_91996956_92002285_1	chr8	-	601	5	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	34771	53639	34771	-53298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGACTACTCCCATAGT	NA	NA	NA	NA	NA	NA	NA	NA	92002285	91996955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91997180_92000238_92000357_92000917_92001098_92001751_92001803_92002257
ENSMUSG00000033282.15_91997072_92007374_1	chr8	-	593	6	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	29682	53755	29682	-53414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAATCTCTTTGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	92007374	91997071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_91997180_92000238_92000357_92000917_92001098_92001751_92001803_92002257_92002365_92007345
ENSMUSG00000033282.15_92000239_92012935_1	chr8	-	670	6	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	24121	56922	24121	-56581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAATGTGCACAGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	92012935	92000238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_92000357_92000917_92001098_92001751_92001803_92002257_92002365_92007345_92007486_92012861
ENSMUSG00000033282.15_92001062_92016287_1	chr8	-	592	7	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	20769	57745	20769	-57404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGAAAAAGTGGACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	92016287	92001061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_92001098_92001751_92001803_92002257_92002365_92007345_92007486_92012861_92012936_92014213_92014361_92016250
ENSMUSG00000033282.15_92002305_92025932_1	chr8	-	603	6	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	11124	58988	11124	-58647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCGGCTGCATGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	92025932	92002304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_92002365_92007345_92007486_92012861_92012936_92014213_92014361_92016250_92016357_92025856
ENSMUSG00000033282.15_92002350_92025991_1	chr8	-	617	6	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	11065	59033	11065	-58692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTCAAGAGAATAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	92025991	92002349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_92002365_92007345_92007486_92012861_92012936_92014213_92014361_92016250_92016357_92025856
ENSMUSG00000033282.15_92012862_92031403_1	chr8	-	631	6	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	5653	69545	5653	-69204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATCACAACTCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	92031403	92012861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_92012936_92014213_92014361_92016250_92016357_92025856_92026001_92027405_92027509_92031346
ENSMUSG00000033282.15_92014263_92031518_1	chr8	-	623	5	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	5538	70946	5538	-70605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGCAGCTGCACTCGG	NA	NA	NA	NA	NA	NA	NA	NA	92031518	92014262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_92014361_92016250_92016357_92025856_92026001_92027405_92027509_92031346
ENSMUSG00000033282.15_92014323_92031561_1	chr8	-	606	5	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	5495	71006	5495	-70665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAATGGAGATGAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	92031561	92014322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_92014361_92016250_92016357_92025856_92026001_92027405_92027509_92031346
ENSMUSG00000033282.15_92027405_92037045_1	chr8	-	628	4	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	11	84088	11	-83747	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTATTCTTTTTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	92037045	92027404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_92027509_92031346_92031646_92034669_92034815_92036965
ENSMUSG00000033285.16_100045496_100051054_1	chr3	-	1234	9	ISM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	18669	0	18669	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGTTCCCTGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	100051054	100045495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008
ENSMUSG00000033285.16_100045611_100051120_1	chr3	-	1185	9	ISM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	18603	115	18603	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAAGAGCTGCCTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	100051120	100045610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008
ENSMUSG00000033285.16_100045726_100051718_1	chr3	-	1177	10	ISM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	18005	230	18005	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAAGTGTCTCATATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	100051718	100045725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634
ENSMUSG00000033285.16_100046051_100053883_1	chr3	-	1174	13	ISM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	15840	555	15840	-555	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAACGAAAAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	100053883	100046050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747
ENSMUSG00000033285.16_100049817_100058447_1	chr3	-	1154	12	ISM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	11276	4321	11276	-4321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAAATGAAAGAACACAG	NA	NA	NA	NA	NA	NA	NA	NA	100058447	100049816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278
ENSMUSG00000033285.16_100051039_100060160_1	chr3	-	1167	11	ISM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	9563	5543	9563	-5543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTATTCTCGAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	100060160	100051038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122
ENSMUSG00000033285.16_100051657_100060929_1	chr3	-	1168	11	ISM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	8794	6161	8794	-6161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCACATCCAAACGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	100060929	100051656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861
ENSMUSG00000033285.16_100051875_100061291_1	chr3	-	1226	11	ISM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	8432	6379	8432	-6379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTGTAGTCCTCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	100061291	100051874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177
ENSMUSG00000033285.16_100053827_100064656_1	chr3	-	1181	12	ISM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	5067	8331	5067	-8331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTCTCCCAATCAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	100064656	100053826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639
ENSMUSG00000033285.16_100058402_100068463_1	chr3	-	1159	10	ISM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	1260	12906	1260	-12906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGAGGACAAGCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	100068463	100058401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335
ENSMUSG00000033285.16_100058446_100068538_1	chr3	-	1190	10	ISM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	1185	12950	1185	-12950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGAGTTGTATTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	100068538	100058445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335
ENSMUSG00000033287.17_78312891_78322780_1	chr15	+	951	9	FSM	ENSMUSG00000033287.17	ENST00000403888.7	1329	9	34	344	29	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCCCCTGGCCCGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	78312890	78322780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321100_78321195_78321357_78321433_78321783_78321872_78322686
ENSMUSG00000033287.17_78312891_78323503_1	chr15	+	1505	7	FSM	ENSMUSG00000033287.17	ENSMUST00000166142.10	1632	7	127	0	29	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTCTCTGGGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	78312890	78323503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321783_78321872_78322686
ENSMUSG00000033287.17_78312996_78322847_1	chr15	+	913	9	FSM	ENSMUSG00000033287.17	ENST00000403888.7	1329	9	139	277	134	58	multi-exon	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTCACTCCTGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	78312995	78322847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321100_78321195_78321357_78321433_78321783_78321872_78322686
ENSMUSG00000033287.17_78314286_78321801_1	chr15	+	491	6	ISM	ENSMUSG00000033287.17	ENST00000402077.7	1254	8	1429	1323	396	-896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACCCAAGCCTGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	78314285	78321801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321100_78321195_78321783
ENSMUSG00000033287.17_78317187_78323126_1	chr15	+	1009	7	ISM	ENSMUSG00000033287.17	ENST00000403888.7	1329	9	4330	-2	3297	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGAGGATCATGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	78317186	78323126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78317277_78318114_78318211_78319784_78319911_78321100_78321195_78321357_78321433_78321783_78321872_78322686
ENSMUSG00000033287.17_78318182_78322780_1	chr15	+	431	5	ISM	ENSMUSG00000033287.17	ENST00000402077.7	1254	8	5325	344	4292	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCCCCTGGCCCGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	78318181	78322780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78318211_78319784_78319911_78321100_78321195_78321783_78321872_78322686
ENSMUSG00000033287.17_78321136_78323043_1	chr15	+	504	3	ISM	ENSMUSG00000033287.17	ENST00000402077.7	1254	8	8279	81	7246	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCACCTCTTAGAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	78321135	78323043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78321195_78321783_78321872_78322686
ENSMUSG00000033287.17_78321177_78323064_1	chr15	+	484	3	ISM	ENSMUSG00000033287.17	ENST00000402077.7	1254	8	8320	60	7287	21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTATGGCACCATAGGG	NA	NA	NA	NA	NA	NA	NA	NA	78321176	78323064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78321195_78321783_78321872_78322686
ENSMUSG00000033294.12_110796284_110800285_1	chr5	-	1759	13	ISM	ENSMUSG00000033294.12	ENSMUST00000042147.6	2075	15	998	0	998	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTGGCTAAATGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	110800285	110796283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178
ENSMUSG00000033294.12_110796441_110801125_1	chr5	-	1760	15	FSM	ENSMUSG00000033294.12	ENSMUST00000042147.6	2075	15	158	157	158	-157	multi-exon	FALSE	canonical	NA	NA	NA	NA	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGGTTTGGTTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	110801125	110796440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ENSMUSG00000033294.12_110796713_110801232_3	chr5	-	1595	15	FSM	ENSMUSG00000033294.12	ENSMUST00000042147.6	2075	15	51	429	51	-429	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAAGAATTGTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	110801232	110796712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ENSMUSG00000033306.16_24266841_24798320_1	chr16	+	2434	12	FSM	ENSMUSG00000033306.16	ENSMUST00000078988.10	3894	12	0	1460	0	40	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCACAGATTATACTCCG	NA	NA	NA	NA	NA	NA	NA	NA	24266840	24798320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_24266999_24275582_24275693_24378341_24378408_24426865_24427068_24480426_24480540_24500495_24500622_24580342_24581027_24663840_24663968_24708539_24708710_24790580_24790760_24795949_24796071_24797942
ENSMUSG00000033306.16_24266947_24798383_1	chr16	+	2391	12	FSM	ENSMUSG00000033306.16	ENSMUST00000078988.10	3894	12	106	1397	106	103	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCACTTCTCATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	24266946	24798383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_24266999_24275582_24275693_24378341_24378408_24426865_24427068_24480426_24480540_24500495_24500622_24580342_24581027_24663840_24663968_24708539_24708710_24790580_24790760_24795949_24796071_24797942
ENSMUSG00000033306.16_24426904_24798703_1	chr16	+	2445	9	ISM	ENSMUSG00000033306.16	ENSMUST00000078988.10	3894	12	160063	1077	-113701	423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCATTGGAAAACATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	24426903	24798703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_24427068_24480426_24480540_24500495_24500622_24580342_24581027_24663840_24663968_24708539_24708710_24790580_24790760_24795949_24796071_24797942
ENSMUSG00000033306.16_24426994_24798741_1	chr16	+	2393	9	ISM	ENSMUSG00000033306.16	ENSMUST00000078988.10	3894	12	160153	1039	-113611	461	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGGAAATAAAACCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	24426993	24798741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_24427068_24480426_24480540_24500495_24500622_24580342_24581027_24663840_24663968_24708539_24708710_24790580_24790760_24795949_24796071_24797942
ENSMUSG00000033306.16_24480444_24798862_1	chr16	+	2423	8	ISM	ENSMUSG00000033306.16	ENSMUST00000078988.10	3894	12	213603	918	-60161	582	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTGTCAGGCTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	24480443	24798862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_24480540_24500495_24500622_24580342_24581027_24663840_24663968_24708539_24708710_24790580_24790760_24795949_24796071_24797942
ENSMUSG00000033306.16_24580382_24799085_1	chr16	+	2385	6	ISM	ENSMUSG00000033306.16	ENSMUST00000115314.4	1808	8	39777	-805	39777	-695	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATGAAATTATAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	24580381	24799085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_24581027_24663840_24663968_24708539_24708710_24790580_24790760_24795949_24796071_24797942
ENSMUSG00000033306.16_24663925_24799795_1	chr16	+	2366	5	ISM	ENSMUSG00000033306.16	ENSMUST00000115314.4	1808	8	123320	-1515	123320	15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTAATTACTTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	24663924	24799795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_24663968_24708539_24708710_24790580_24790760_24795949_24796071_24797942
ENSMUSG00000033307.8_75695187_75696074_1	chr10	-	539	3	NNC	ENSMUSG00000033307.8	novel	544	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	10373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTGCCTCAGCTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	75696074	75695186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_75695378_75695520_75695694_75695899
ENSMUSG00000033307.8_75695187_75696074_2	chr10	-	534	3	NNC	ENSMUSG00000033307.8	novel	544	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTGCCTCAGCTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	75696074	75695186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_75695378_75695520_75695684_75695894
ENSMUSG00000033313.12_105991314_105994858_1	chr8	+	767	3	FSM	ENSMUSG00000033313.12	ENSMUST00000036221.12	1901	3	34	1100	34	-1100	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAGCTGTGCACGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	105991313	105994858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_105991393_105993326_105993798_105994641
ENSMUSG00000033313.12_105993528_105995076_1	chr8	+	705	2	ISM	ENSMUSG00000033313.12	ENSMUST00000036221.12	1901	3	2248	882	2248	-882	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGCACCTTGCTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	105993527	105995076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_105993798_105994641
ENSMUSG00000033318.8_75667679_75668404_1	chr10	-	384	2	ISM	ENSMUSG00000033318.8	ENST00000402588.6	701	5	1716	-32	1716	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTTTTTTTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75668404	75667678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_75667929_75668270
ENSMUSG00000033318.8_75667893_75669575_1	chr10	-	409	4	ISM	ENSMUSG00000033318.8	ENST00000402588.6	701	5	545	182	545	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGCTGACAGCATGGCG	NA	NA	NA	NA	NA	NA	NA	NA	75669575	75667892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_75667929_75668270_75668403_75668494_75668646_75669485
ENSMUSG00000033318.8_75668292_75670058_1	chr10	-	400	4	ISM	ENSMUSG00000033318.8	ENST00000402588.6	701	5	62	581	62	-509	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCTTGTTGGCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	75670058	75668291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_75668403_75668494_75668646_75669485_75669574_75670008
ENSMUSG00000033319.6_46637861_46658930_1	chr18	-	2570	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	108	3048	108	-3048	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTTTCAGTGATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	46658930	46637860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_46639457_46657168_46657897_46658684
ENSMUSG00000033323.15_80451660_80493235_1	chr18	-	1657	5	ISM	ENSMUSG00000033323.15	ENST00000075430.11	2942	12	19554	-1	-9161	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGCCTCTCATGGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	80493235	80451659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80451997_80463657_80463846_80489100_80489311_80490638_80490781_80492455
ENSMUSG00000033323.15_80451667_80493329_1	chr18	-	1744	5	ISM	ENSMUSG00000033323.15	ENST00000075430.11	2942	12	19460	6	-9255	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCAACGGGGCCTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	80493329	80451666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80451997_80463657_80463846_80489100_80489311_80490638_80490781_80492455
ENSMUSG00000033323.15_80451856_80494450_1	chr18	-	1770	6	ISM	ENSMUSG00000033323.15	ENST00000075430.11	2942	12	18339	195	-10376	-195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGACCCGCCCCATACC	NA	NA	NA	NA	NA	NA	NA	NA	80494450	80451855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80451997_80463657_80463846_80489100_80489311_80490638_80490781_80492455_80493464_80494369
ENSMUSG00000033323.15_80451919_80494496_1	chr18	-	1753	6	ISM	ENSMUSG00000033323.15	ENST00000075430.11	2942	12	18293	258	-10422	-258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGTTCAGAAGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	80494496	80451918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80451997_80463657_80463846_80489100_80489311_80490638_80490781_80492455_80493464_80494369
ENSMUSG00000033323.15_80451971_80495548_1	chr18	-	1770	7	ISM	ENSMUSG00000033323.15	ENST00000075430.11	2942	12	17241	310	-11474	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGCTGCCAGCGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	80495548	80451970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80451997_80463657_80463846_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519
ENSMUSG00000033323.15_80463737_80499201_1	chr18	-	1760	7	ISM	ENSMUSG00000033323.15	ENST00000075430.11	2942	12	13588	12076	13588	-12076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGGGATCCGAAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	80499201	80463736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80463846_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168
ENSMUSG00000033323.15_80463793_80499247_1	chr18	-	1750	7	ISM	ENSMUSG00000033323.15	ENST00000075430.11	2942	12	13542	12132	13542	-12132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAGAAGACCAAGACAATG	NA	NA	NA	NA	NA	NA	NA	NA	80499247	80463792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80463846_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168
ENSMUSG00000033323.15_80463830_80499318_1	chr18	-	1784	7	ISM	ENSMUSG00000033323.15	ENST00000075430.11	2942	12	13471	12169	13471	-12169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGGGCAGTGATGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	80499318	80463829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80463846_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168
ENSMUSG00000033323.15_80489292_80502471_1	chr18	-	1762	8	ISM	ENSMUSG00000033323.15	ENST00000075430.11	2942	12	10318	37631	10318	-37631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCAGACAGACACAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80502471	80489291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416
ENSMUSG00000033323.15_80492512_80512551_1	chr18	-	1772	8	ISM	ENSMUSG00000033323.15	ENST00000075430.11	2942	12	238	40851	238	-40851	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGAGCCCTGATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	80512551	80492511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ENSMUSG00000033323.15_80492630_80512648_1	chr18	-	1751	8	ISM	ENSMUSG00000033323.15	ENST00000075430.11	2942	12	141	40969	141	-40969	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCTCGCAGATGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	80512648	80492629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ENSMUSG00000033323.15_80492685_80512736_1	chr18	-	1784	8	ISM	ENSMUSG00000033323.15	ENST00000075430.11	2942	12	53	41024	53	-41024	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGCTTGAGGAAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	80512736	80492684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ENSMUSG00000033350.8_95286353_95288775_1	chr9	-	2320	2	FSM	ENSMUSG00000033350.8	ENSMUST00000036267.8	7328	2	0	5008	0	-5008	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTTACAAAATTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	95288775	95286352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_95288527_95288629
ENSMUSG00000033352.12_65581314_65582600_1	chr11	-	364	2	ISM	ENSMUSG00000033352.12	ENST00000415385.7	3703	12	96523	2220	96523	-2220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGAGAGACCTCATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	65582600	65581313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_65581631_65582553
ENSMUSG00000033352.12_65582554_65597937_1	chr11	-	401	4	ISM	ENSMUSG00000033352.12	ENST00000415385.7	3703	12	81186	3460	81186	-3460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATGGACCCTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	65597937	65582553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_65582600_65584247_65584397_65587113_65587192_65597809
ENSMUSG00000033352.12_65584348_65603063_1	chr11	-	367	5	ISM	ENSMUSG00000033352.12	ENST00000415385.7	3703	12	76060	5254	76060	-5254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATCAGCTAACACAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	65603063	65584347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003
ENSMUSG00000033352.12_65610365_65666591_1	chr11	-	376	4	ISM	ENSMUSG00000033352.12	ENST00000415385.7	3703	12	12532	31271	12532	-31271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGAGTAGTGATTGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	65666591	65610364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_65610430_65626017_65626193_65647094_65647198_65666558
ENSMUSG00000033361.14_71006588_71011552_1	chrX	+	1096	5	NNC	ENSMUSG00000033361.14	novel	1114	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCGAATGAGCACAAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	71006587	71011552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_71006654_71009420_71009459_71010116_71010273_71010662_71011369_71011422
ENSMUSG00000033361.14_71006588_71011552_2	chrX	+	1098	5	NNC	ENSMUSG00000033361.14	novel	1114	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCGAATGAGCACAAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	71006587	71011552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_71006654_71009420_71009459_71010116_71010273_71010662_71011371_71011422
ENSMUSG00000033361.14_71006588_71011552_3	chrX	+	1091	5	NNC	ENSMUSG00000033361.14	novel	1114	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCGAATGAGCACAAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	71006587	71011552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_71006654_71009425_71009459_71010116_71010273_71010662_71011369_71011422
ENSMUSG00000033361.14_71006588_71011552_4	chrX	+	1094	5	NNC	ENSMUSG00000033361.14	novel	1114	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCGAATGAGCACAAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	71006587	71011552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_71006654_71009420_71009459_71010116_71010273_71010662_71011367_71011422
ENSMUSG00000033361.14_71006588_71011552_5	chrX	+	1090	5	NNC	ENSMUSG00000033361.14	novel	1114	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCGAATGAGCACAAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	71006587	71011552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_71006654_71009420_71009459_71010116_71010273_71010668_71011369_71011422
ENSMUSG00000033365.15_117751683_117760359_1	chr4	-	981	10	ISM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	11837	0	11837	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTCCTTTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	117760359	117751682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317
ENSMUSG00000033365.15_117761050_117769104_1	chr4	-	981	7	ISM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	3092	9367	3092	-9367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGCAAGTATGACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	117769104	117761049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969
ENSMUSG00000033365.15_117761666_117769293_1	chr4	-	951	6	ISM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	2903	9983	2903	-9983	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCTGATGTGGTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	117769293	117761665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969
ENSMUSG00000033365.15_117762677_117771629_1	chr4	-	986	3	ISM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	567	10994	567	-10994	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTATTGCTGTGGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	117771629	117762676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117762781_117768969_117769707_117771484
ENSMUSG00000033365.15_117769061_117771791_1	chr4	-	953	2	ISM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	405	17378	405	-17378	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCCTTCGCCGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	117771791	117769060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117769707_117771484
ENSMUSG00000033377.15_116711907_116746786_1	chr3	-	1841	7	NNC	ENSMUSG00000033377.15	novel	1850	8	NA	NA	15381	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCATGGTAATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	116746786	116711906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_116712276_116716883_116717985_116720821_116720933_116721049_116721084_116721223_116721289_116741604_116741685_116746705
ENSMUSG00000033377.15_116711907_116746786_3	chr3	-	1844	7	NNC	ENSMUSG00000033377.15	novel	2433	8	NA	NA	15381	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCATGGTAATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	116746786	116711906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_116712283_116716883_116717985_116720821_116720933_116721049_116721084_116721223_116721280_116741599_116741685_116746705
ENSMUSG00000033377.15_116711907_116746786_4	chr3	-	1842	7	NNC	ENSMUSG00000033377.15	novel	2433	8	NA	NA	15381	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1015	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCATGGTAATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	116746786	116711906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_116712283_116716883_116717985_116720821_116720933_116721049_116721084_116721223_116721289_116741610_116741685_116746705
ENSMUSG00000033377.15_116711907_116746786_5	chr3	-	1848	7	ISM	ENSMUSG00000033377.15	ENST00000615664.1	1850	8	15381	-19	15381	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCATGGTAATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	116746786	116711906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116712283_116716883_116717985_116720821_116720933_116721049_116721084_116721223_116721289_116741604_116741685_116746705
ENSMUSG00000033377.15_116711907_116746786_7	chr3	-	1845	7	NNC	ENSMUSG00000033377.15	novel	2433	8	NA	NA	15381	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCATGGTAATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	116746786	116711906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_116712283_116716883_116717985_116720821_116720933_116721049_116721084_116721223_116721280_116741598_116741685_116746705
ENSMUSG00000033377.15_116711907_116746786_8	chr3	-	1846	7	NNC	ENSMUSG00000033377.15	novel	2433	8	NA	NA	15381	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCATGGTAATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	116746786	116711906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_116712283_116716883_116717985_116720821_116720933_116721049_116721084_116721223_116721289_116741606_116741685_116746705
ENSMUSG00000033377.15_116711907_116762164_1	chr3	-	1866	8	FSM	ENSMUSG00000033377.15	ENST00000615664.1	1850	8	3	-19	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCATGGTAATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	116762164	116711906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_116712283_116716883_116717985_116720821_116720933_116721049_116721084_116721223_116721289_116741604_116741685_116746705_116746787_116762146
ENSMUSG00000033379.14_117741523_117743556_1	chr4	-	791	6	ISM	ENSMUSG00000033379.14	ENSMUST00000150204.8	935	7	961	-7	961	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	117743556	117741522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472
ENSMUSG00000033379.14_117741523_117743557_1	chr4	-	784	6	NNC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	960	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	117743557	117741522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_117741831_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472
ENSMUSG00000033379.14_117741523_117743557_2	chr4	-	787	6	NNC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	960	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	117743557	117741522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743269_117743343_117743472
ENSMUSG00000033379.14_117741642_117744484_1	chr4	-	839	8	FSM	ENSMUSG00000033379.14	ENSMUST00000036380.14	1000	8	42	119	33	-112	multi-exon	FALSE	canonical	NA	NA	NA	NA	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGGAGTGGGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	117744484	117741641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117744366
ENSMUSG00000033379.14_117741642_117744484_2	chr4	-	834	8	NNC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	33	-112	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGGAGTGGGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	117744484	117741641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743269_117743343_117743472_117743557_117743786_117743836_117744366
ENSMUSG00000033386.11_116653216_116676812_1	chr3	+	721	6	ISM	ENSMUSG00000033386.11	ENSMUST00000040260.11	2377	17	103	20315	103	-20315	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCACCTTCTGTCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	116653215	116676812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_116653284_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697
ENSMUSG00000033386.11_116659852_116678860_1	chr3	+	777	6	ISM	ENSMUSG00000033386.11	ENSMUST00000040260.11	2377	17	6739	18267	6739	-18267	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTCAGTGATGGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	116659851	116678860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755
ENSMUSG00000033386.11_116672057_116685544_1	chr3	+	761	7	ISM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	181	16282	181	-11583	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGAAACATCACCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	116672056	116685544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488
ENSMUSG00000033386.11_116675407_116689227_1	chr3	+	764	6	ISM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	3531	12599	3531	-7900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCCTTTTGAAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	116675406	116689227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136
ENSMUSG00000033386.11_116676698_116690442_1	chr3	+	808	6	ISM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	4822	11384	4822	-6685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGGCCGAAAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	116676697	116690442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326
ENSMUSG00000033386.11_116678756_116694350_1	chr3	+	845	7	ISM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	6880	7476	6880	-2777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCCGGCTCATGCATA	NA	NA	NA	NA	NA	NA	NA	NA	116678755	116694350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252
ENSMUSG00000033386.11_116689169_116696817_1	chr3	+	748	8	ISM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	17293	5009	17293	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTTTATTTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	116689168	116696817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ENSMUSG00000033386.11_116689232_116696884_1	chr3	+	752	8	ISM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	17356	4942	17356	-243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGCCGACCACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	116689231	116696884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ENSMUSG00000033386.11_116690359_116696991_1	chr3	+	808	7	ISM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	18483	4835	18483	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCTGGGCCTTTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	116690358	116696991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ENSMUSG00000033386.11_116692841_116697127_1	chr3	+	831	6	ISM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	20965	4699	20965	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	116692840	116697127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ENSMUSG00000033389.17_64896280_64914043_1	chr11	-	1107	7	ISM	ENSMUSG00000033389.17	ENST00000262444.13	2910	22	139500	2477	139350	-2477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTGGCCCCAGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	64914043	64896279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_64896332_64898888_64899267_64900707_64900866_64902696_64902925_64903732_64903751_64912766_64912948_64913951
ENSMUSG00000033389.17_64898889_64915130_2	chr11	-	1169	7	ISM	ENSMUSG00000033389.17	ENST00000262444.13	2910	22	138413	5086	138263	-5086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGGCATGGGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	64915130	64898888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_64899267_64900707_64900866_64902696_64902925_64903732_64903751_64912766_64912948_64913951_64914044_64915016
ENSMUSG00000033389.17_64902832_64943954_1	chr11	-	1082	12	ISM	ENSMUSG00000033389.17	ENST00000262444.13	2910	22	109589	9029	109439	-9029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCCCACCCTCCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	64943954	64902831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_64902925_64903732_64903751_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924
ENSMUSG00000033389.17_64912767_64948199_1	chr11	-	1136	11	ISM	ENSMUSG00000033389.17	ENST00000262444.13	2910	22	105344	18964	105194	-18964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGAGCTAGCGCCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	64948199	64912766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122
ENSMUSG00000033389.17_64912901_64950692_1	chr11	-	1045	12	ISM	ENSMUSG00000033389.17	ENST00000262444.13	2910	22	102851	19098	102701	-19098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCACAATGCCAACTACAG	NA	NA	NA	NA	NA	NA	NA	NA	64950692	64912900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649
ENSMUSG00000033389.17_64913952_64957982_1	chr11	-	1144	12	ISM	ENSMUSG00000033389.17	ENST00000262444.13	2910	22	95561	20149	95411	-20149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGTTTCAGCATTCACA	NA	NA	NA	NA	NA	NA	NA	NA	64957982	64913951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905
ENSMUSG00000033389.17_64915016_64965367_1	chr11	-	1158	12	ISM	ENSMUSG00000033389.17	ENST00000262444.13	2910	22	88176	21213	88026	-21213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTACAGGAAGGAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	64965367	64915015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262
ENSMUSG00000033389.17_64917676_65053483_1	chr11	-	1109	13	ISM	ENSMUSG00000033389.17	ENST00000262444.13	2910	22	60	23873	60	-23873	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGCTTGTGAGAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	65053483	64917675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
ENSMUSG00000033396.14_121884333_121885944_1	chr2	-	459	3	ISM	ENSMUSG00000033396.14	ENST00000535302.6	7002	38	62929	0	62859	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTACCTATACAGCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	121885944	121884332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121884542_121884860_121885013_121885846
ENSMUSG00000033396.14_121885846_121888931_1	chr2	-	523	4	ISM	ENSMUSG00000033396.14	ENST00000535302.6	7002	38	59942	1513	59872	-1485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATACTCGGGCAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	121888931	121885845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121886003_121886177_121886267_121886546_121886716_121888823
ENSMUSG00000033396.14_121890231_121895813_1	chr2	-	512	2	ISM	ENSMUSG00000033396.14	ENST00000535302.6	7002	38	53060	5898	52990	347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGTTGGACAAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	121895813	121890230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121890319_121895389
ENSMUSG00000033396.14_121890586_121895920_1	chr2	-	936	3	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	52953	8	52883	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGTTACAGTCATACAC	NA	NA	NA	NA	NA	NA	NA	NA	121895920	121890585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121890851_121891402_121891543_121895389
ENSMUSG00000033396.14_121890639_121895989_1	chr2	-	952	3	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	52884	61	52814	-61	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACCTCACCAACCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	121895989	121890638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121890851_121891402_121891543_121895389
ENSMUSG00000033396.14_121890764_121896098_1	chr2	-	936	3	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	52775	186	52705	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGACAAGCCCAGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	121896098	121890763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121890851_121891402_121891543_121895389
ENSMUSG00000033396.14_121891483_121896858_1	chr2	-	941	3	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	52015	905	51945	-905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCCACACTCTCATAAGC	NA	NA	NA	NA	NA	NA	NA	NA	121896858	121891482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121891543_121895389_121896138_121896725
ENSMUSG00000033396.14_121895487_121899297_1	chr2	-	944	3	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	49576	4909	49506	-4909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACTTGCACTCAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	121899297	121895486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121896138_121896725_121896941_121899219
ENSMUSG00000033396.14_121895629_121900412_1	chr2	-	950	4	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	48461	5051	48391	-5051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAACACTTTGATCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	121900412	121895628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121896138_121896725_121896941_121899219_121899383_121900349
ENSMUSG00000033396.14_121895767_121901445_1	chr2	-	957	5	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	47428	5189	47358	-5189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTTTTGATAGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	121901445	121895766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345
ENSMUSG00000033396.14_121895842_121901502_1	chr2	-	939	5	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	47371	5264	47301	-5264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCCAGCACACATGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	121901502	121895841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345
ENSMUSG00000033396.14_121895944_121902612_1	chr2	-	958	6	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	46261	5366	46191	-5366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGCTGCTCACTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	121902612	121895943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535
ENSMUSG00000033396.14_121896022_121902667_1	chr2	-	935	6	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	46206	5444	46136	-5444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGCCTCTTCCTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	121902667	121896021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535
ENSMUSG00000033396.14_121896077_121902728_1	chr2	-	941	6	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	46145	5499	46075	-5499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCTTCTGGAAAAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	121902728	121896076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535
ENSMUSG00000033396.14_121896783_121903388_1	chr2	-	947	6	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	45485	6205	45415	-6205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGAGAGTGGCCGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	121903388	121896782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326
ENSMUSG00000033396.14_121896816_121903463_1	chr2	-	989	6	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	45410	6238	45340	-6238	internal_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGCTAAAAGCAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	121903463	121896815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326
ENSMUSG00000033396.14_121900350_121905981_1	chr2	-	1039	6	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	42892	9772	42822	-9772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGGAATTGGAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	121905981	121900349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775
ENSMUSG00000033396.14_121901371_121910789_1	chr2	-	982	6	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	38084	10793	38014	-10793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGGTTTCCAGCTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	121910789	121901370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713
ENSMUSG00000033396.14_121901447_121910831_1	chr2	-	948	6	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	38042	10869	37972	-10869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCACTGGAGCCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	121910831	121901446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713
ENSMUSG00000033396.14_121902587_121913974_1	chr2	-	1006	7	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	34899	12009	34829	-12009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGAGACATCGGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	121913974	121902586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880
ENSMUSG00000033396.14_121905826_121918738_1	chr2	-	929	7	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	30135	15248	30065	-15248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCGTAGAGATGAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	121918738	121905825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613
ENSMUSG00000033396.14_121910786_121922803_1	chr2	-	946	7	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	26070	20208	26000	-20208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACGCCCGTCGTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	121922803	121910785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637
ENSMUSG00000033396.14_121918709_121927783_1	chr2	-	916	7	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	21090	28131	21020	-28131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGCAGGGTGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	121927783	121918708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925003_121926066_121926248_121927736
ENSMUSG00000033396.14_121918757_121927854_1	chr2	-	939	7	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	21019	28179	20949	-28179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATTGGGGGCGTAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	121927854	121918756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925003_121926066_121926248_121927736
ENSMUSG00000033396.14_121922679_121928639_1	chr2	-	953	7	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	20234	32101	20164	-32101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGTCACATGAGGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	121928639	121922678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121922849_121923445_121923622_121923896_121924025_121924938_121925003_121926066_121926248_121927736_121927913_121928581
ENSMUSG00000033396.14_121922721_121928699_1	chr2	-	971	7	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	20174	32143	20104	-32143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCTCTGAGTGCTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	121928699	121922720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121922849_121923445_121923622_121923896_121924025_121924938_121925003_121926066_121926248_121927736_121927913_121928581
ENSMUSG00000033396.14_121922793_121928737_1	chr2	-	937	7	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	20136	32215	20066	-32215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCAAGCATCAGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	121928737	121922792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121922849_121923445_121923622_121923896_121924025_121924938_121925003_121926066_121926248_121927736_121927913_121928581
ENSMUSG00000033396.14_121926156_121938784_1	chr2	-	970	6	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	10089	35578	10019	-35578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTTAGGATCGGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	121938784	121926155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517
ENSMUSG00000033396.14_121927862_121938952_1	chr2	-	921	5	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	9921	37284	9851	-37284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGCTTCGGACTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	121938952	121927861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517
ENSMUSG00000033396.14_121934456_121943574_1	chr2	-	938	5	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	5299	43878	5229	-43878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGGACTCCCTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	121943574	121934455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495
ENSMUSG00000033396.14_121938601_121945111_1	chr2	-	945	5	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	3762	48023	3692	-48023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCATGCAGTGTTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	121945111	121938600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088
ENSMUSG00000033396.14_121938645_121945174_1	chr2	-	964	5	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	3699	48067	3629	-48067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGACCAGCTGCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	121945174	121938644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088
ENSMUSG00000033396.14_121938723_121945228_1	chr2	-	940	5	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	3645	48145	3575	-48145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTGAACATGAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	121945228	121938722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088
ENSMUSG00000033396.14_121938872_121948777_1	chr2	-	1009	6	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	96	48294	26	-48294	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGAGTCCCTGGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	121948777	121938871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ENSMUSG00000033416.16_75344632_75347098_1	chr10	-	408	3	ISM	ENSMUSG00000033416.16	ENST00000447813.6	592	5	5967	-1	5967	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTTCTGGGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	75347098	75344631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_75344804_75345865_75345958_75346954
ENSMUSG00000033416.16_75344632_75347121_1	chr10	-	431	3	ISM	ENSMUSG00000033416.16	ENST00000447813.6	592	5	5944	-1	5944	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTTCTGGGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	75347121	75344631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_75344804_75345865_75345958_75346954
ENSMUSG00000033416.16_75344799_75347991_1	chr10	-	349	4	ISM	ENSMUSG00000033416.16	ENST00000447813.6	592	5	5074	166	5074	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGCACCAGCATCAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	75347991	75344798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_75344804_75345865_75345958_75346954_75347121_75347905
ENSMUSG00000033416.16_75344799_75353004_1	chr10	-	365	5	FSM	ENSMUSG00000033416.16	ENST00000447813.6	592	5	61	166	61	-166	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGCACCAGCATCAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	75353004	75344798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_75344804_75345865_75345958_75346954_75347121_75347905_75347991_75352987
ENSMUSG00000033417.17_60516863_60569227_1	chr19	-	1827	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	236	3729	18	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGCTTCCTGAAGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	60569227	60516862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ENSMUSG00000033417.17_60516863_60569227_2	chr19	-	1822	9	NNC	ENSMUSG00000033417.17	novel	5792	9	NA	NA	18	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGCTTCCTGAAGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	60569227	60516862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533975_60551599_60551703_60552605_60552733_60568765
ENSMUSG00000033417.17_60516863_60569227_3	chr19	-	1821	9	NNC	ENSMUSG00000033417.17	novel	5792	9	NA	NA	18	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGCTTCCTGAAGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	60569227	60516862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531545_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ENSMUSG00000033419.17_86647976_86717273_1	chr9	-	3577	22	NNC	ENSMUSG00000033419.17	novel	4404	29	NA	NA	45194	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAATCTTTCTGTCTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	86717273	86647975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409_86675518_86680590_86680753_86686503_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161
ENSMUSG00000033419.17_86647986_86718750_1	chr9	-	3643	23	NNC	ENSMUSG00000033419.17	novel	4404	29	NA	NA	43717	3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1435	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGCAAACGTAATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	86718750	86647985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409_86675518_86680590_86680753_86686497_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680
ENSMUSG00000033419.17_86648237_86720896_1	chr9	-	3565	25	NNC	ENSMUSG00000033419.17	novel	4404	29	NA	NA	41571	-248	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTAGTGGCTTGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	86720896	86648236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409_86675518_86680590_86680753_86686503_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844
ENSMUSG00000033419.17_86648251_86720916_1	chr9	-	3579	25	NNC	ENSMUSG00000033419.17	novel	4404	29	NA	NA	41551	-262	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGATCAGTGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	86720916	86648250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409_86675518_86680590_86680753_86686495_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844
ENSMUSG00000033419.17_86648428_86655676_1	chr9	-	1170	3	ISM	ENSMUSG00000033419.17	ENSMUST00000036347.13	4237	29	106826	439	106791	303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCCATCCTTCAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	86655676	86648427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86649390_86651511_86651615_86655571
ENSMUSG00000033419.17_86648452_86761526_1	chr9	-	3580	28	ISM	ENSMUSG00000033419.17	ENST00000369694.6	4404	29	1005	476	941	279	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTTCTATAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	86761526	86648451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409_86675518_86680590_86680753_86680882_86680898_86686507_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844_86720921_86721564_86721708_86761474
ENSMUSG00000033419.17_86648468_86761533_1	chr9	-	3560	27	NNC	ENSMUSG00000033419.17	novel	4404	29	NA	NA	934	263	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAGTTAGTATTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	86761533	86648467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409_86675518_86680590_86680753_86686503_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844_86720921_86721564_86721708_86761474
ENSMUSG00000033419.17_86648518_86761577_1	chr9	-	3565	28	ISM	ENSMUSG00000033419.17	ENST00000369694.6	4404	29	954	542	890	213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1606	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAGAGAACTGCAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	86761577	86648517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409_86675518_86680590_86680753_86680882_86680898_86686507_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844_86720921_86721564_86721708_86761474
ENSMUSG00000033419.17_86648522_86761608_1	chr9	-	3581	27	NNC	ENSMUSG00000033419.17	novel	4404	29	NA	NA	859	209	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACTTAAAGAGAACTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	86761608	86648521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409_86675518_86680590_86680753_86686503_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844_86720921_86721564_86721708_86761474
ENSMUSG00000033419.17_86648574_86761624_1	chr9	-	3556	28	ISM	ENSMUSG00000033419.17	ENST00000369694.6	4404	29	907	598	843	157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1583	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAGAGATGTGCTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	86761624	86648573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409_86675518_86680590_86680753_86680882_86680898_86686507_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844_86720921_86721564_86721708_86761474
ENSMUSG00000033419.17_86648731_86663741_1	chr9	-	1211	7	ISM	ENSMUSG00000033419.17	ENST00000195649.10	4389	29	98790	755	98726	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAACCATATGAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	86663741	86648730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622
ENSMUSG00000033419.17_86648875_86665396_1	chr9	-	1127	8	ISM	ENSMUSG00000033419.17	ENST00000195649.10	4389	29	97135	899	97071	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAATCACAGAAACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	86665396	86648874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622_86663758_86665352
ENSMUSG00000033419.17_86648994_86672138_1	chr9	-	1129	9	ISM	ENSMUSG00000033419.17	ENST00000195649.10	4389	29	90393	1018	90329	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCCATGAACTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	86672138	86648993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622_86663758_86665352_86665488_86672108
ENSMUSG00000033419.17_86649117_86673581_1	chr9	-	1104	10	ISM	ENSMUSG00000033419.17	ENST00000195649.10	4389	29	88950	1141	88886	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTGGACGTTGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	86673581	86649116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622_86663758_86665352_86665488_86672108_86672193_86673537
ENSMUSG00000033419.17_86649344_86674579_1	chr9	-	1127	13	ISM	ENSMUSG00000033419.17	ENST00000195649.10	4389	29	87952	1368	87888	-613	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTCAGATAAGATTGATG	NA	NA	NA	NA	NA	NA	NA	NA	86674579	86649343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622_86663758_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519
ENSMUSG00000033419.17_86655572_86674794_1	chr9	-	1193	11	ISM	ENSMUSG00000033419.17	ENST00000195649.10	4389	29	87737	7596	87673	-6841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTTGTCTAGAGTTCGC	NA	NA	NA	NA	NA	NA	NA	NA	86674794	86655571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622_86663758_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519
ENSMUSG00000033419.17_86656250_86675519_1	chr9	-	1193	11	ISM	ENSMUSG00000033419.17	ENST00000195649.10	4389	29	87012	8274	86948	-7519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGATGACTCGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	86675519	86656249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86656334_86657634_86657745_86659086_86659118_86663622_86663758_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409
ENSMUSG00000033419.17_86657685_86680752_1	chr9	-	1219	11	ISM	ENSMUSG00000033419.17	ENSMUST00000036347.13	4237	29	81750	9696	81715	-8954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTCACTCCAGCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	86680752	86657684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86657745_86659086_86659118_86663622_86663758_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409_86675518_86680590
ENSMUSG00000033419.17_86663704_86686583_1	chr9	-	1133	10	NNC	ENSMUSG00000033419.17	novel	4389	29	NA	NA	75884	-14973	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCCCACCCAGTCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	86686583	86663703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_86663758_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409_86675518_86680590_86680753_86686497
ENSMUSG00000033419.17_86663725_86686580_1	chr9	-	1114	11	ISM	ENSMUSG00000033419.17	ENSMUST00000036347.13	4237	29	75922	15736	75887	-14994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGCCTGCCCCTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	86686580	86663724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86663758_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409_86675518_86680590_86680753_86680882_86680898_86686507
ENSMUSG00000033419.17_86680591_86721707_1	chr9	-	1171	12	NNC	ENSMUSG00000033419.17	novel	4150	26	NA	NA	40760	-31860	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTCAGTCACACCACTA	NA	NA	NA	NA	NA	NA	NA	NA	86721707	86680590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_86680753_86686497_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844_86720921_86721564
ENSMUSG00000033419.17_86686586_86762333_1	chr9	-	1123	13	ISM	ENSMUSG00000033419.17	ENST00000195649.10	4389	29	198	38610	134	-37855	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCGACTTCTCTGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	86762333	86686585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844_86720921_86721564_86721708_86761474_86761635_86762291
ENSMUSG00000033419.17_86688538_86762450_1	chr9	-	1189	12	ISM	ENSMUSG00000033419.17	ENST00000195649.10	4389	29	81	40562	17	-39807	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTGCCCCAGTCAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	86762450	86688537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844_86720921_86721564_86721708_86761474_86761635_86762291
ENSMUSG00000033420.13_87179276_87289375_1	chr6	-	1017	14	NNC	ENSMUSG00000033420.13	novel	1022	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	964	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGAATCTGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87289375	87179275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_87179358_87181386_87181433_87194255_87194352_87217931_87218011_87219468_87219539_87232764_87232864_87246224_87246286_87259668_87259750_87261235_87261305_87263982_87264063_87265133_87265163_87265739_87265822_87285309_87285382_87289304
ENSMUSG00000033420.13_87179276_87289375_10	chr6	-	1017	14	NNC	ENSMUSG00000033420.13	novel	1022	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGAATCTGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87289375	87179275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_87179358_87181386_87181433_87194255_87194352_87217931_87218006_87219468_87219539_87232764_87232864_87246224_87246286_87259668_87259750_87261235_87261305_87263982_87264063_87265133_87265168_87265739_87265822_87285309_87285382_87289304
ENSMUSG00000033420.13_87179276_87289375_11	chr6	-	1015	14	NNC	ENSMUSG00000033420.13	novel	1022	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGAATCTGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87289375	87179275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_87179358_87181386_87181433_87194255_87194352_87217931_87218011_87219468_87219539_87232764_87232864_87246224_87246286_87259668_87259750_87261235_87261305_87263982_87264056_87265133_87265168_87265739_87265822_87285309_87285382_87289304
ENSMUSG00000033420.13_87179276_87289375_12	chr6	-	1013	14	NNC	ENSMUSG00000033420.13	novel	1022	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGAATCTGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87289375	87179275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_87179358_87181395_87181433_87194255_87194352_87217931_87218011_87219468_87219539_87232764_87232864_87246224_87246286_87259668_87259750_87261235_87261305_87263982_87264063_87265133_87265168_87265739_87265822_87285309_87285382_87289304
ENSMUSG00000033420.13_87179276_87289375_14	chr6	-	1013	14	NNC	ENSMUSG00000033420.13	novel	1022	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGAATCTGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87289375	87179275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_87179358_87181386_87181424_87194255_87194352_87217931_87218011_87219468_87219539_87232764_87232864_87246224_87246286_87259668_87259750_87261235_87261305_87263982_87264063_87265133_87265168_87265739_87265822_87285309_87285382_87289304
ENSMUSG00000033420.13_87179276_87289375_15	chr6	-	1014	14	NNC	ENSMUSG00000033420.13	novel	1022	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGAATCTGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87289375	87179275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_87179358_87181386_87181433_87194255_87194352_87217931_87218011_87219476_87219539_87232764_87232864_87246224_87246286_87259668_87259750_87261235_87261305_87263982_87264063_87265133_87265168_87265739_87265822_87285309_87285382_87289304
ENSMUSG00000033420.13_87179276_87289375_16	chr6	-	1017	14	NNC	ENSMUSG00000033420.13	novel	1022	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGAATCTGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87289375	87179275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_87179358_87181386_87181433_87194255_87194352_87217931_87218011_87219468_87219534_87232764_87232864_87246224_87246286_87259668_87259750_87261235_87261305_87263982_87264063_87265133_87265168_87265739_87265822_87285309_87285382_87289304
ENSMUSG00000033420.13_87179276_87289375_17	chr6	-	1015	14	NNC	ENSMUSG00000033420.13	novel	1022	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGAATCTGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87289375	87179275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_87179358_87181386_87181433_87194255_87194352_87217931_87218011_87219468_87219539_87232764_87232864_87246224_87246286_87259668_87259750_87261235_87261305_87263982_87264063_87265133_87265168_87265739_87265815_87285309_87285382_87289304
ENSMUSG00000033420.13_87179276_87289375_18	chr6	-	1016	14	NNC	ENSMUSG00000033420.13	novel	1022	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGAATCTGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87289375	87179275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_87179358_87181386_87181433_87194255_87194352_87217931_87218011_87219468_87219539_87232764_87232864_87246224_87246286_87259668_87259750_87261235_87261305_87263982_87264063_87265139_87265168_87265739_87265822_87285309_87285382_87289304
ENSMUSG00000033420.13_87179276_87289375_19	chr6	-	1015	14	NNC	ENSMUSG00000033420.13	novel	1022	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGAATCTGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87289375	87179275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_87179349_87181384_87181433_87194255_87194352_87217931_87218011_87219468_87219539_87232764_87232864_87246224_87246286_87259668_87259750_87261235_87261305_87263982_87264063_87265133_87265168_87265739_87265822_87285309_87285382_87289304
ENSMUSG00000033420.13_87179276_87289375_3	chr6	-	1022	14	FSM	ENSMUSG00000033420.13	ENST00000409349.7	1022	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGAATCTGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87289375	87179275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_87179358_87181386_87181433_87194255_87194352_87217931_87218011_87219468_87219539_87232764_87232864_87246224_87246286_87259668_87259750_87261235_87261305_87263982_87264063_87265133_87265168_87265739_87265822_87285309_87285382_87289304
ENSMUSG00000033420.13_87179276_87289375_4	chr6	-	1012	14	NNC	ENSMUSG00000033420.13	novel	1022	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGAATCTGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87289375	87179275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_87179358_87181386_87181433_87194255_87194352_87217931_87218011_87219468_87219539_87232774_87232864_87246224_87246286_87259668_87259750_87261235_87261305_87263982_87264063_87265133_87265168_87265739_87265822_87285309_87285382_87289304
ENSMUSG00000033420.13_87179276_87289375_7	chr6	-	1013	14	NNC	ENSMUSG00000033420.13	novel	1022	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGAATCTGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87289375	87179275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_87179358_87181386_87181433_87194255_87194352_87217931_87218011_87219468_87219539_87232764_87232864_87246224_87246277_87259668_87259750_87261235_87261305_87263982_87264063_87265133_87265168_87265739_87265822_87285309_87285382_87289304
ENSMUSG00000033420.13_87179276_87289375_9	chr6	-	1015	14	NNC	ENSMUSG00000033420.13	novel	1022	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGAATCTGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87289375	87179275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_87179358_87181386_87181433_87194255_87194352_87217931_87218011_87219468_87219539_87232764_87232864_87246224_87246286_87259668_87259750_87261235_87261305_87263982_87264063_87265133_87265168_87265739_87265822_87285309_87285375_87289304
ENSMUSG00000033423.17_117407562_117531494_1	chr4	+	1711	9	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCTTGTGTCTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	117407561	117531494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472373_117472439_117506503_117506604_117530937
ENSMUSG00000033423.17_117407562_117531494_2	chr4	+	1714	9	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCTTGTGTCTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	117407561	117531494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450355_117472365_117472439_117506503_117506604_117530937
ENSMUSG00000033423.17_117407562_117531494_3	chr4	+	1713	9	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCTTGTGTCTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	117407561	117531494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_117407928_117410164_117410241_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ENSMUSG00000033430.11_112738214_112744733_1	chr8	+	949	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	184	2427	184	-2427	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACGGTTATCCCATTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	112738213	112744733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_112738775_112741968_112742094_112744470
ENSMUSG00000033430.11_112738416_112744962_1	chr8	+	976	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	386	2198	386	-2198	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCCGGTGCTGCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	112738415	112744962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_112738775_112741968_112742094_112744470
ENSMUSG00000033430.11_112738708_112745184_1	chr8	+	906	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	678	1976	678	-1976	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGGTGAGGGAATAATT	NA	NA	NA	NA	NA	NA	NA	NA	112738707	112745184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_112738775_112741968_112742094_112744470
ENSMUSG00000033430.11_112741979_112745318_1	chr8	+	963	2	ISM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	3949	1842	3949	-1842	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGGATTCTGTGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	112741978	112745318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_112742094_112744470
ENSMUSG00000033434.16_110251841_110254202_1	chr5	-	935	6	ISM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	1861	0	1861	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCTGGTTTTGTATAGGT	NA	NA	NA	NA	NA	NA	NA	NA	110254202	110251840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131
ENSMUSG00000033434.16_110252009_110254578_1	chr5	-	827	7	ISM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	1485	168	1485	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGTGCAGGAGCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	110254578	110252008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518
ENSMUSG00000033434.16_110252243_110254806_1	chr5	-	834	7	ISM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	1257	402	1257	-402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCGTGGGCTAGACGAG	NA	NA	NA	NA	NA	NA	NA	NA	110254806	110252242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735
ENSMUSG00000033434.16_110252421_110255042_1	chr5	-	862	7	ISM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	1021	580	1021	-580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCAGCGTTGGAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	110255042	110252420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925
ENSMUSG00000033434.16_110252774_110255818_1	chr5	-	858	7	ISM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	245	933	245	-933	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGACGTGGCTTACTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	110255818	110252773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255721
ENSMUSG00000033434.16_110252875_110255876_1	chr5	-	815	7	ISM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	187	1034	187	-1034	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGTTGCTCCCCTCACGC	NA	NA	NA	NA	NA	NA	NA	NA	110255876	110252874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255721
ENSMUSG00000033434.16_110252926_110256006_1	chr5	-	894	7	ISM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	57	1085	57	-1085	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCAGCCGCGGGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	110256006	110252925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255721
ENSMUSG00000033436.14_133704896_133707577_1	chrX	-	2189	2	NNC	ENSMUSG00000033436.14	novel	2303	2	NA	NA	106	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTGTTCTGGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	133707577	133704895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_133706614_133707106
ENSMUSG00000033436.14_133704896_133707577_2	chrX	-	2195	2	FSM	ENSMUSG00000033436.14	ENST00000328766.9	2303	2	106	2	106	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTGTTCTGGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	133707577	133704895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_133706620_133707106
ENSMUSG00000033436.14_133704896_133707672_1	chrX	-	2288	2	NNC	ENSMUSG00000033436.14	novel	3773	5	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTGTTCTGGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	133707672	133704895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_133706629_133707117
ENSMUSG00000033439.13_116374985_116378919_1	chr3	-	780	3	ISM	ENSMUSG00000033439.13	ENST00000370141.7	1463	11	9446	10	9446	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAATATTCACCAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	116378919	116374984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116375260_116376142_116376573_116378844
ENSMUSG00000033439.13_116375146_116382135_1	chr3	-	707	5	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	26101	404	6230	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGACCCATTGGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	116382135	116375145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120
ENSMUSG00000033439.13_116375181_116382201_1	chr3	-	738	5	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	26035	439	6164	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGAAAGGCTTCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	116382201	116375180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120
ENSMUSG00000033439.13_116375237_116382246_1	chr3	-	727	5	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	25990	495	6119	-262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATAGGACATCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	116382246	116375236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120
ENSMUSG00000033439.13_116376241_116383218_1	chr3	-	727	5	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	25018	1499	5147	-1266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTACTCCAGAGAGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	116383218	116376240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139
ENSMUSG00000033439.13_116376539_116386159_1	chr3	-	704	9	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	22077	1797	2206	-1564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAGTTTTGAGGAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	116386159	116376538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112
ENSMUSG00000033439.13_116376557_116388334_1	chr3	-	733	10	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	19902	1815	31	-1582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTGAAACCTATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	116388334	116376556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ENSMUSG00000033439.13_116378845_116388321_1	chr3	-	704	9	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	19915	4103	44	-3870	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGCAGCAGGACACACA	NA	NA	NA	NA	NA	NA	NA	NA	116388321	116378844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ENSMUSG00000033439.13_116383129_116388321_1	chr3	-	357	6	FSM	ENSMUSG00000033439.13	ENST00000370139.1	400	6	44	-1	44	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAATCACTAAACGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	116388321	116383128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_116383205_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ENSMUSG00000033467.13_109702581_109706802_1	chr5	-	1264	8	FSM	ENSMUSG00000033467.13	ENSMUST00000044579.12	1323	8	57	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAATGCGGCCAGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	109706802	109702580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383_109705481_109706670
ENSMUSG00000033475.16_47997665_47998215_1	chr17	-	372	2	ISM	ENSMUSG00000033475.16	ENSMUST00000113302.10	749	3	893	94	778	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTATTTTATTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	47998215	47997664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47997934_47998112
ENSMUSG00000033475.16_47997665_47998884_1	chr17	-	485	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113301.2	594	3	109	0	109	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTATTTTATTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	47998884	47997664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_47997988_47998112_47998214_47998823
ENSMUSG00000033475.16_47997787_47998993_1	chr17	-	472	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113301.2	594	3	0	122	0	-122	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGCCTCTGCACGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	47998993	47997786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_47997988_47998112_47998214_47998823
ENSMUSG00000033475.16_47997830_47999006_1	chr17	-	388	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113302.10	749	3	102	259	-13	-165	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCCCCCCCACTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	47999006	47997829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_47997934_47998112_47998214_47998823
ENSMUSG00000033475.16_47998109_47999108_1	chr17	-	390	2	ISM	ENSMUSG00000033475.16	ENSMUST00000113302.10	749	3	0	538	0	-444	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCACTTTCCCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	47999108	47998108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47998214_47998823
ENSMUSG00000033486.15_121227434_121240984_1	chr2	-	969	8	FSM	ENSMUSG00000033486.15	ENST00000321596.6	1017	8	48	0	48	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGATGTAAGGCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	121240984	121227433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_121227474_121230217_121230318_121230524_121230704_121236809_121236935_121237187_121237344_121237823_121237997_121240618_121240688_121240857
ENSMUSG00000033487.15_72776970_72790988_1	chr14	-	1247	3	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	49467	1579	49467	-1579	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACACACACACTTACACA	NA	NA	NA	NA	NA	NA	NA	NA	72790988	72776969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72777922_72789911_72790040_72790821
ENSMUSG00000033487.15_72777153_72793676_1	chr14	-	1154	4	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	46779	1762	46779	-1762	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAACTTGTTCAAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	72793676	72777152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586
ENSMUSG00000033487.15_72777283_72793925_1	chr14	-	1175	5	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	46530	1892	46530	-1892	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACACTGCTATGATCGTG	NA	NA	NA	NA	NA	NA	NA	NA	72793925	72777282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897
ENSMUSG00000033487.15_72777398_72794034_1	chr14	-	1169	5	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	46421	2007	46421	-2007	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTATTTTGGTTTGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	72794034	72777397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897
ENSMUSG00000033487.15_72777600_72794339_1	chr14	-	1175	6	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	46116	2209	46116	-2209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTATTTTTAACACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	72794339	72777599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278
ENSMUSG00000033487.15_72777743_72795101_1	chr14	-	1149	7	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	45354	2352	45354	-2352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAAAGACAGTGTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	72795101	72777742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073
ENSMUSG00000033487.15_72777869_72796475_1	chr14	-	1165	8	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	43980	2478	43980	-2478	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTATCGATTTCGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	72796475	72777868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419
ENSMUSG00000033487.15_72789912_72796595_1	chr14	-	1232	7	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	43860	14521	43860	-14521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGTCAAGATACCATT	NA	NA	NA	NA	NA	NA	NA	NA	72796595	72789911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419
ENSMUSG00000033487.15_72790915_72799092_1	chr14	-	1172	8	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	41363	15524	41363	-15524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCATTCAAGCTTGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	72799092	72790914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037
ENSMUSG00000033487.15_72790972_72799142_1	chr14	-	1165	8	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	41313	15581	41313	-15581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGCCTTGTCATACATAT	NA	NA	NA	NA	NA	NA	NA	NA	72799142	72790971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037
ENSMUSG00000033487.15_72793663_72802158_1	chr14	-	1268	9	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	38297	18272	38297	-18272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAGAAGGAACTCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	72802158	72793662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045
ENSMUSG00000033487.15_72793733_72802158_1	chr14	-	1198	9	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	38297	18342	38297	-18342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCCTTCCCCCTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	72802158	72793732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045
ENSMUSG00000033487.15_72793898_72803623_1	chr14	-	1244	9	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	36832	18507	36832	-18507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATACCTCAAAATCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	72803623	72793897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536
ENSMUSG00000033487.15_72794022_72804789_1	chr14	-	1160	10	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	35666	18631	35666	-18631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTATGACCATGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	72804789	72794021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749
ENSMUSG00000033487.15_72794074_72804846_1	chr14	-	1165	10	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	35609	18683	35609	-18683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAATACCCCCATTACTC	NA	NA	NA	NA	NA	NA	NA	NA	72804846	72794073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749
ENSMUSG00000033487.15_72794283_72806332_1	chr14	-	1182	10	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	34123	18892	34123	-18892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTAGGTGACTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	72806332	72794282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281
ENSMUSG00000033487.15_72794330_72806398_1	chr14	-	1201	10	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	34057	18939	34057	-18939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAATTAAAAGGACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	72806398	72794329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281
ENSMUSG00000033487.15_72795123_72810775_1	chr14	-	1161	11	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	29680	19732	29680	-19732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCAAGTGACATGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	72810775	72795122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729
ENSMUSG00000033487.15_72796508_72811840_1	chr14	-	1150	11	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	28615	21117	28615	-21117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGTTCTGAAGTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	72811840	72796507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791
ENSMUSG00000033487.15_72796681_72812120_1	chr14	-	1232	11	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	28335	21290	28335	-21290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCCATTTTGGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	72812120	72796680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962
ENSMUSG00000033487.15_72799101_72822053_1	chr14	-	1160	12	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	18402	23710	18402	-23710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTCCAGGCTGCTATTA	NA	NA	NA	NA	NA	NA	NA	NA	72822053	72799100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014
ENSMUSG00000033487.15_72802182_72822284_1	chr14	-	1130	10	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	18171	26791	18171	-26791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCTTATAACTCAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	72822284	72802181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014
ENSMUSG00000033487.15_72803564_72827272_1	chr14	-	1179	10	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	13183	28173	13183	-28173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACGAAGTACAAAGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	72827272	72803563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193
ENSMUSG00000033487.15_72804810_72827383_1	chr14	-	1170	9	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	13072	29419	13072	-29419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGAACACCATCAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	72827383	72804809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193
ENSMUSG00000033488.12_157286310_157299807_1	chr1	+	466	5	ISM	ENSMUSG00000033488.12	ENST00000507834.3	699	6	1	16258	1	-16258	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTCCGTGCCCAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	157286309	157299807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_157286423_157293281_157293392_157294735_157294818_157298185_157298297_157299757
ENSMUSG00000033488.12_157286350_157299877_1	chr1	+	496	5	ISM	ENSMUSG00000033488.12	ENST00000507834.3	699	6	41	16188	41	-16188	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACACCAGGACTTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	157286349	157299877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_157286423_157293281_157293392_157294735_157294818_157298185_157298297_157299757
ENSMUSG00000033488.12_157286358_157299769_1	chr1	+	586	7	ISM	ENSMUSG00000033488.12	ENST00000476232.6	937	8	49	16328	49	-16296	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGGATCGTGGTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	157286357	157299769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157298185_157298307_157299701
ENSMUSG00000033488.12_157286401_157299837_1	chr1	+	611	7	ISM	ENSMUSG00000033488.12	ENST00000476232.6	937	8	92	16260	92	-16228	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAACATCTCGGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	157286400	157299837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157298185_157298307_157299701
ENSMUSG00000033488.12_157286406_157299932_1	chr1	+	495	5	ISM	ENSMUSG00000033488.12	ENST00000507834.3	699	6	97	16133	97	-16133	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGCAAGGGCTCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	157286405	157299932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_157286423_157293281_157293392_157294735_157294818_157298185_157298297_157299757
ENSMUSG00000033488.12_157289522_157299940_1	chr1	+	693	6	ISM	ENSMUSG00000033488.12	ENST00000476232.6	937	8	3213	16157	3213	-16125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTCATCCACCCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	157289521	157299940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157298185_157298307_157299701
ENSMUSG00000033488.12_157292533_157316065_1	chr1	+	637	5	ISM	ENSMUSG00000033488.12	ENST00000476232.6	937	8	6224	32	6224	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCCCTCAAGTAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	157292532	157316065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_157292601_157293281_157293392_157298185_157298307_157299701_157299987_157316012
ENSMUSG00000033488.12_157293280_157316065_1	chr1	+	587	5	ISM	ENSMUSG00000033488.12	ENST00000507834.3	699	6	6971	0	6971	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCCCTCAAGTAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	157293279	157316065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_157293392_157294735_157294818_157298185_157298297_157299757_157299987_157316012
ENSMUSG00000033488.12_157294735_157316065_1	chr1	+	476	4	ISM	ENSMUSG00000033488.12	ENST00000507834.3	699	6	8426	0	8426	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCCCTCAAGTAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	157294734	157316065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_157294818_157298185_157298297_157299757_157299987_157316012
ENSMUSG00000033510.15_63346765_63383431_1	chr7	+	561	5	ISM	ENSMUSG00000033510.15	ENST00000678495.1	2946	11	46237	25181	46209	-25181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTATATGAAAGCCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	63346764	63383431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63346981_63377165_63377268_63378809_63378938_63379561_63379657_63383411
ENSMUSG00000033510.15_63346810_63383499_1	chr7	+	584	5	ISM	ENSMUSG00000033510.15	ENST00000678495.1	2946	11	46282	25113	46254	-25113	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGGCAGACACCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	63346809	63383499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63346981_63377165_63377268_63378809_63378938_63379561_63379657_63383411
ENSMUSG00000033510.15_63377163_63385696_1	chr7	+	606	5	ISM	ENSMUSG00000033510.15	ENST00000678495.1	2946	11	76635	22916	76607	-22916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTCCGGCTCCTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	63377162	63385696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63377268_63378809_63378938_63379561_63379657_63383411_63383540_63385546
ENSMUSG00000033510.15_63379574_63404736_1	chr7	+	549	5	ISM	ENSMUSG00000033510.15	ENST00000678495.1	2946	11	79046	3876	79018	-3876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGAGACCCGGGTGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	63379573	63404736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63379657_63383411_63383540_63385546_63385697_63404379_63404495_63404663
ENSMUSG00000033510.15_63383461_63407193_1	chr7	+	565	5	ISM	ENSMUSG00000033510.15	ENST00000678495.1	2946	11	82933	1419	82905	-1419	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAAGGAGAAACAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	63383460	63407193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_63383540_63385546_63385697_63404379_63404495_63404663_63404749_63407057
ENSMUSG00000033526.17_121141380_121147224_1	chr2	-	1751	2	ISM	ENSMUSG00000033526.17	ENST00000360135.8	5323	27	33908	338	33908	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTTAGAAGATGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	121147224	121141379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121143038_121147131
ENSMUSG00000033526.17_121141538_121152197_1	chr2	-	1680	3	ISM	ENSMUSG00000033526.17	ENST00000360135.8	5323	27	28935	496	28935	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCAAGTGCTCCCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	121152197	121141537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121143038_121147131_121147250_121152135
ENSMUSG00000033526.17_121141800_121164985_1	chr2	-	1677	5	ISM	ENSMUSG00000033526.17	ENST00000360135.8	5323	27	16147	758	16147	-420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAACTGCTGAAGATACC	NA	NA	NA	NA	NA	NA	NA	NA	121164985	121141799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121143038_121147131_121147250_121152135_121152274_121162038_121162130_121164893
ENSMUSG00000033526.17_121141857_121165024_1	chr2	-	1659	5	ISM	ENSMUSG00000033526.17	ENST00000360135.8	5323	27	16108	815	16108	-477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCTTCACTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	121165024	121141856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121143038_121147131_121147250_121152135_121152274_121162038_121162130_121164893
ENSMUSG00000033526.17_121142058_121166953_1	chr2	-	1683	7	ISM	ENSMUSG00000033526.17	ENST00000360135.8	5323	27	14179	1016	14179	-678	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACTTGTAGTCTTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	121166953	121142057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121143038_121147131_121147250_121152135_121152274_121162038_121162130_121164893_121165059_121165203_121165318_121166876
ENSMUSG00000033526.17_121142296_121167644_1	chr2	-	1672	9	ISM	ENSMUSG00000033526.17	ENST00000360135.8	5323	27	13488	1254	13488	-916	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTGCCATCAGTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	121167644	121142295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121143038_121147131_121147250_121152135_121152274_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563
ENSMUSG00000033526.17_121142457_121168035_1	chr2	-	1664	10	ISM	ENSMUSG00000033526.17	ENST00000360135.8	5323	27	13097	1415	13097	-1077	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGTCTCAGTAAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	121168035	121142456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121143038_121147131_121147250_121152135_121152274_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929
ENSMUSG00000033526.17_121142683_121168389_1	chr2	-	1643	11	ISM	ENSMUSG00000033526.17	ENST00000360135.8	5323	27	12743	1641	12743	-1303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCCAGGAGGTCCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	121168389	121142682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121143038_121147131_121147250_121152135_121152274_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302
ENSMUSG00000033526.17_121142792_121171290_1	chr2	-	1648	12	ISM	ENSMUSG00000033526.17	ENST00000360135.8	5323	27	9842	1750	9842	-1412	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCCATATAGAAAGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	121171290	121142791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121143038_121147131_121147250_121152135_121152274_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231
ENSMUSG00000033526.17_121142861_121171362_1	chr2	-	1651	12	ISM	ENSMUSG00000033526.17	ENST00000360135.8	5323	27	9770	1819	9770	-1481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACATATGACTGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	121171362	121142860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121143038_121147131_121147250_121152135_121152274_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231
ENSMUSG00000033526.17_121142934_121171407_1	chr2	-	1623	12	ISM	ENSMUSG00000033526.17	ENST00000360135.8	5323	27	9725	1892	9725	-1554	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCCCTTCCTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	121171407	121142933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121143038_121147131_121147250_121152135_121152274_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231
ENSMUSG00000033526.17_121147192_121172467_1	chr2	-	1670	13	ISM	ENSMUSG00000033526.17	ENST00000360135.8	5323	27	8665	6150	8665	-5812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTCATTCGCCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	121172467	121147191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121147250_121152135_121152274_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385
ENSMUSG00000033526.17_121165204_121174058_1	chr2	-	1726	14	ISM	ENSMUSG00000033526.17	ENST00000360135.8	5323	27	7074	24162	7074	-23824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTCGGAGGCTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	121174058	121165203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956
ENSMUSG00000033526.17_121172131_121181047_1	chr2	-	1682	15	ISM	ENSMUSG00000033526.17	ENST00000360135.8	5323	27	85	31089	85	-30751	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCGTCCAGATGACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	121181047	121172130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957
ENSMUSG00000033538.14_5322858_5336667_1	chr9	+	960	7	ISM	ENSMUSG00000033538.14	ENSMUST00000027012.14	1435	9	14009	116	14009	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACAGTGGGATTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	5322857	5336667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_5322918_5323624_5323799_5324723_5324959_5327175_5327320_5328432_5328543_5335995_5336100_5336534
ENSMUSG00000033540.19_108827631_108829619_1	chr5	+	1038	7	ISM	ENSMUSG00000033540.19	ENST00000247933.9	1544	11	64	1612	64	-1612	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCTGCAGAGCAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	108827630	108829619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537
ENSMUSG00000033540.19_108827645_108829619_1	chr5	+	1018	7	NNC	ENSMUSG00000033540.19	novel	1544	11	NA	NA	78	-1612	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCTGCAGAGCAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	108827644	108829619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_108827678_108827976_108828073_108828160_108828364_108828436_108828611_108828726_108828944_108829245_108829459_108829537
ENSMUSG00000033540.19_108827976_108829660_1	chr5	+	1026	6	NNC	ENSMUSG00000033540.19	novel	1544	11	NA	NA	409	-1571	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGGCAAGTAGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	108827975	108829660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_108828073_108828160_108828364_108828443_108828617_108828726_108828944_108829245_108829459_108829537
ENSMUSG00000033540.19_108828036_108829812_1	chr5	+	1017	7	ISM	ENSMUSG00000033540.19	ENST00000247933.9	1544	11	469	1419	469	-1419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCCTACACCGGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	108828035	108829812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767
ENSMUSG00000033540.19_108828159_108829897_1	chr5	+	1061	6	NNC	ENSMUSG00000033540.19	novel	1544	11	NA	NA	592	-1334	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCAGCCTCCTACCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	108828158	108829897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_108828364_108828436_108828617_108828726_108828944_108829251_108829459_108829537_108829660_108829767
ENSMUSG00000033540.19_108828159_108829897_2	chr5	+	1060	6	NNC	ENSMUSG00000033540.19	novel	1544	11	NA	NA	592	-1334	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCAGCCTCCTACCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	108828158	108829897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_108828364_108828443_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767
ENSMUSG00000033540.19_108828294_108830975_1	chr5	+	1057	8	NIC	ENSMUSG00000033540.19	novel	1544	11	NA	NA	727	-256	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAGGAGGCCGTCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	108828293	108830975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_+_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829970_108830043_108830918
ENSMUSG00000033540.19_108828489_108831231_1	chr5	+	1078	8	NIC	ENSMUSG00000033540.19	novel	1544	11	NA	NA	922	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATGAGAGCCACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	108828488	108831231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_+_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829970_108830043_108830918_108831020_108831132
ENSMUSG00000033540.19_108828489_108831231_2	chr5	+	1076	8	NNC	ENSMUSG00000033540.19	novel	1544	11	NA	NA	922	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	621	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATGAGAGCCACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	108828488	108831231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_108828611_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829898_108829970_108830043_108830918_108831020_108831132
ENSMUSG00000033540.19_108828489_108831231_3	chr5	+	1080	8	NNC	ENSMUSG00000033540.19	novel	1544	11	NA	NA	922	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATGAGAGCCACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	108828488	108831231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_108828617_108828726_108828948_108829251_108829459_108829537_108829660_108829767_108829898_108829970_108830043_108830918_108831020_108831132
ENSMUSG00000033543.18_69919832_69926797_1	chr9	+	463	4	ISM	ENSMUSG00000033543.18	ENSMUST00000118198.8	893	5	0	3351	0	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGCTCACCTAACTAC	NA	NA	NA	NA	NA	NA	NA	NA	69919831	69926797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69919944_69922573_69922693_69924100_69924206_69926670
ENSMUSG00000033543.18_69919925_69929797_1	chr9	+	449	5	FSM	ENSMUSG00000033543.18	ENSMUST00000118198.8	893	5	93	351	72	-222	multi-exon	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAACATGGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	69919924	69929797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69926670_69926798_69929718
ENSMUSG00000033543.18_69922572_69929797_1	chr9	+	432	4	ISM	ENSMUSG00000033543.18	ENSMUST00000119413.8	1034	5	2719	222	0	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAACATGGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	69922571	69929797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_69922693_69924100_69924206_69926670_69926798_69929718
ENSMUSG00000033543.18_69922625_69926797_1	chr9	+	195	2	FSM	ENSMUSG00000033543.18	ENST00000484743.5	248	2	53	0	53	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGCTCACCTAACTAC	NA	NA	NA	NA	NA	NA	NA	NA	69922624	69926797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_69922693_69926670
ENSMUSG00000033545.15_112263474_112349705_1	chr8	+	1185	5	NNC	ENSMUSG00000033545.15	novel	1228	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTCGACTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	112263473	112349705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_112264201_112335932_112336021_112345837_112345944_112348227_112348320_112349533
ENSMUSG00000033545.15_112263474_112349705_2	chr8	+	1189	5	FSM	ENSMUSG00000033545.15	ENST00000567962.5	1228	5	39	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTCGACTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	112263473	112349705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349533
ENSMUSG00000033545.15_112263474_112349705_3	chr8	+	1181	5	NNC	ENSMUSG00000033545.15	novel	1228	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTCGACTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	112263473	112349705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_112264197_112335924_112336021_112345837_112345944_112348235_112348320_112349533
ENSMUSG00000033554.18_115681843_115722737_1	chr3	+	1321	8	FSM	ENSMUSG00000033554.18	ENSMUST00000043342.10	1576	8	11	244	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTTTTATAATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	115681842	115722737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157
ENSMUSG00000033554.18_115686436_115722981_1	chr3	+	1248	6	ISM	ENSMUSG00000033554.18	ENSMUST00000043342.10	1576	8	4604	0	4604	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGCAGTCAGCGACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	115686435	115722981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157
ENSMUSG00000033557.18_156507142_156515012_1	chr1	-	2218	3	ISM	ENSMUSG00000033557.18	ENSMUST00000086153.8	4414	8	31644	1001	31630	-1001	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTACTGATTGAACATC	NA	NA	NA	NA	NA	NA	NA	NA	156515012	156507141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156509213_156513760_156513821_156514925
ENSMUSG00000033557.18_156507497_156526455_1	chr1	-	2299	5	ISM	ENSMUSG00000033557.18	ENSMUST00000086153.8	4414	8	20201	1356	20187	-1356	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGTGTACATCAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	156526455	156507496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296
ENSMUSG00000033557.18_156507793_156533434_1	chr1	-	2238	7	ISM	ENSMUSG00000033557.18	ENSMUST00000086153.8	4414	8	13222	1652	13208	-1652	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTACACTTTGCGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	156533434	156507792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237
ENSMUSG00000033557.18_156507901_156533574_1	chr1	-	2270	7	ISM	ENSMUSG00000033557.18	ENSMUST00000086153.8	4414	8	13082	1760	13068	-1760	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCGAGACTGGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	156533574	156507900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237
ENSMUSG00000033557.18_156508051_156533676_1	chr1	-	2222	7	ISM	ENSMUSG00000033557.18	ENSMUST00000086153.8	4414	8	12980	1910	12966	-1910	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAACCAACATGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	156533676	156508050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237
ENSMUSG00000033557.18_156508341_156546642_1	chr1	-	2293	9	FSM	ENSMUSG00000033557.18	ENSMUST00000122424.8	4532	9	0	2239	0	-2200	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTCATCCCCCGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	156546642	156508340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156544457_156544551_156546435
ENSMUSG00000033565.19_76964895_77190665_1	chr15	-	4739	14	FSM	ENSMUSG00000033565.19	ENSMUST00000171751.10	6907	14	463	1705	140	-216	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGAAAGGGACTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	77190665	76964894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ENSMUSG00000033565.19_76964972_77190805_1	chr15	-	4802	14	FSM	ENSMUSG00000033565.19	ENSMUST00000171751.10	6907	14	323	1782	0	-293	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGCCAGTTCTCCACT	NA	NA	NA	NA	NA	NA	NA	NA	77190805	76964971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ENSMUSG00000033565.19_76965265_77191018_1	chr15	-	4722	14	FSM	ENSMUSG00000033565.19	ENSMUST00000171751.10	6907	14	110	2075	110	-586	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGGAGAGCTTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	77191018	76965264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ENSMUSG00000033565.19_76968362_77037805_1	chr15	-	1183	13	FSM	ENSMUSG00000033565.19	ENSMUST00000228087.2	1694	13	149	362	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACGTGAGACCCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	77037805	76968361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
ENSMUSG00000033565.19_76968362_77037805_2	chr15	-	1170	12	NNC	ENSMUSG00000033565.19	novel	1243	13	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACGTGAGACCCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	77037805	76968361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_76968407_76969777_76969851_76970266_76970386_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001265_77016916_77017142_77037729
ENSMUSG00000033565.19_76968362_77037805_3	chr15	-	1173	13	NNC	ENSMUSG00000033565.19	novel	1243	13	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACGTGAGACCCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	77037805	76968361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983526_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001265_77016916_77017142_77037729
ENSMUSG00000033565.19_76983456_77001225_1	chr15	-	390	5	ISM	ENSMUSG00000033565.19	ENST00000262829.11	1482	12	36712	15318	36531	-15094	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCCCTCTAATCAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	77001225	76983455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76983533_76983638_76983693_76987078_76987140_76989776_76989870_77001120
ENSMUSG00000033565.19_76987090_77016997_1	chr15	-	368	4	ISM	ENSMUSG00000033565.19	ENST00000262829.11	1482	12	20940	18952	20759	-18728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCAAATGGTGAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	77016997	76987089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76987140_76989776_76989870_77001120_77001265_77016916
ENSMUSG00000033576.13_76931272_76941306_1	chr15	+	2114	3	ISM	ENSMUSG00000033576.13	ENSMUST00000149569.9	2314	5	1796	0	1796	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTTGACTACAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	76931271	76941306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76931332_76934806_76935606_76940051
ENSMUSG00000033581.18_21879543_21898356_1	chr16	-	821	7	NNC	ENSMUSG00000033581.18	novel	1617	14	NA	NA	81701	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCCCACAGCACCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	21898356	21879542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_21879636_21880609_21880724_21882331_21882501_21886892_21887010_21889056_21889126_21897365_21897502_21898233
ENSMUSG00000033581.18_21879543_21898876_1	chr16	-	886	8	ISM	ENSMUSG00000033581.18	ENST00000550858.1	1617	14	82837	0	81181	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCCCACAGCACCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	21898876	21879542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_21879636_21880609_21880724_21882331_21882506_21886892_21887010_21889056_21889126_21897365_21897502_21898233_21898357_21898816
ENSMUSG00000033581.18_21880688_21900537_1	chr16	-	844	8	ISM	ENSMUSG00000033581.18	ENST00000550858.1	1617	14	81176	1145	79520	-1145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	947	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTGCCTCGTGACCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	21900537	21880687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_21880724_21882331_21882506_21886892_21887010_21889056_21889126_21897365_21897502_21898233_21898357_21898816_21898952_21900483
ENSMUSG00000033581.18_21882390_21900608_1	chr16	-	815	7	NNC	ENSMUSG00000033581.18	novel	1617	14	NA	NA	79449	-2847	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATCCGAGTCCCCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	21900608	21882389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_21882506_21886892_21887010_21889056_21889126_21897365_21897502_21898233_21898357_21898816_21898952_21900489
ENSMUSG00000033581.18_21882402_21900618_1	chr16	-	814	7	NNC	ENSMUSG00000033581.18	novel	1617	14	NA	NA	79439	-2859	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGGAGGCCCACATCC	NA	NA	NA	NA	NA	NA	NA	NA	21900618	21882401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_21882501_21886892_21887010_21889056_21889126_21897365_21897502_21898233_21898357_21898816_21898952_21900483
ENSMUSG00000033581.18_21882413_21900681_1	chr16	-	871	7	ISM	ENSMUSG00000033581.18	ENST00000550858.1	1617	14	81032	2870	79376	-2870	internal_fragment	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGAAGTGAAGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	21900681	21882412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_21882506_21886892_21887010_21889056_21889126_21897365_21897502_21898233_21898357_21898816_21898952_21900483
ENSMUSG00000033581.18_21883844_21897443_1	chr16	-	338	4	ISM	ENSMUSG00000033581.18	ENST00000435000.2	1649	15	84269	4301	82614	-4301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAGTGCCAAGGACCATG	NA	NA	NA	NA	NA	NA	NA	NA	21897443	21883843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_21883918_21886892_21887010_21889056_21889126_21897365
ENSMUSG00000033581.18_21886893_21902739_1	chr16	-	898	7	ISM	ENSMUSG00000033581.18	ENST00000440915.1	1399	13	77318	7351	77318	-7350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	959	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGATTGTTACTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	21902739	21886892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_21887010_21889056_21889126_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673
ENSMUSG00000033581.18_21886893_21906331_1	chr16	-	950	8	ISM	ENSMUSG00000033581.18	ENST00000440915.1	1399	13	73726	7351	73726	-7350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGATTGTTACTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	21906331	21886892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_21887010_21889056_21889126_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277
ENSMUSG00000033581.18_21889057_21907868_1	chr16	-	888	8	ISM	ENSMUSG00000033581.18	ENST00000440915.1	1399	13	72189	9515	72189	-9514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	724	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGCCCCTCATTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	21907868	21889056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_21889126_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811
ENSMUSG00000033581.18_21897450_21981583_1	chr16	-	836	9	ISM	ENSMUSG00000033581.18	ENST00000435000.2	1649	15	129	17907	129	-17907	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTGAAGCCTGTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	21981583	21897449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ENSMUSG00000033581.18_21897484_21981725_1	chr16	-	944	9	ISM	ENSMUSG00000033581.18	ENST00000550858.1	1617	14	-12	17941	-12	-17941	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAACCCCGAGAGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	21981725	21897483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ENSMUSG00000033589.5_70782794_70786375_1	chr14	+	1562	8	NNC	ENSMUSG00000033589.5	novel	1565	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTCTTCACATCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	70782793	70786375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_70783174_70783916_70783990_70784369_70784447_70784554_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
ENSMUSG00000033590.9_75152259_75157684_1	chr9	+	491	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	12830	53667	12830	-53667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACAGCAGTCGGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	75152258	75157684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75152418_75153419_75153565_75157014_75157172_75157654
ENSMUSG00000033590.9_75152327_75157727_1	chr9	+	466	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	12898	53624	12898	-53624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGAGAAACCAGATCATT	NA	NA	NA	NA	NA	NA	NA	NA	75152326	75157727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75152418_75153419_75153565_75157014_75157172_75157654
ENSMUSG00000033590.9_75152381_75157777_1	chr9	+	462	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	12952	53574	12952	-53574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCAGAGTTGTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	75152380	75157777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75152418_75153419_75153565_75157014_75157172_75157654
ENSMUSG00000033590.9_75153505_75159819_1	chr9	+	457	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	14076	51532	14076	-51532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAACTACACAAGAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	75153504	75159819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805
ENSMUSG00000033590.9_75157092_75163166_1	chr9	+	468	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	17663	48185	17663	-48185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGGCAATGTGCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	75157091	75163166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112
ENSMUSG00000033590.9_75157698_75165303_1	chr9	+	461	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	18269	46048	18269	-46048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGGCTGTGCAACAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	75157697	75165303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240
ENSMUSG00000033590.9_75157740_75165378_1	chr9	+	494	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	18311	45973	18311	-45973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCCAGGGATGCGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	75157739	75165378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240
ENSMUSG00000033590.9_75163145_75170321_1	chr9	+	478	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	23716	41030	23716	-41030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAGACTTCTATGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	75163144	75170321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75163220_75165240_75165507_75169489_75169572_75170266
ENSMUSG00000033590.9_75165289_75173385_1	chr9	+	477	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	25860	37966	25860	-37966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTATAACAATTTTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	75165288	75173385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75165507_75169489_75169572_75170266_75170408_75173349
ENSMUSG00000033590.9_75165428_75174353_1	chr9	+	475	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	25999	36998	25999	-36998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACATGCTGGTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	75165427	75174353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306
ENSMUSG00000033590.9_75170338_75177603_1	chr9	+	468	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	30909	33748	30909	-33748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGTCCGTTGCATCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	75170337	75177603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550
ENSMUSG00000033590.9_75176801_75180815_1	chr9	+	459	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	37372	30536	37372	-30536	internal_fragment	TRUE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCAAAATTTTCTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	75176800	75180815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790
ENSMUSG00000033590.9_75176855_75180868_1	chr9	+	458	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	37426	30483	37426	-30483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGATAAACTGAGACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	75176854	75180868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790
ENSMUSG00000033590.9_75176910_75180922_1	chr9	+	457	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	37481	30429	37481	-30429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGAGGAGGAAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	75176909	75180922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790
ENSMUSG00000033590.9_75180184_75183230_1	chr9	+	480	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	40755	28121	40755	-28121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGGCCCGGCGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	75180183	75183230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75180239_75180790_75181003_75182752_75182919_75183183
ENSMUSG00000033590.9_75180832_75184229_1	chr9	+	500	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	41403	27122	41403	-27122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGTGGAGAAGCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	75180831	75184229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75181003_75182752_75182919_75183183_75183331_75184213
ENSMUSG00000033590.9_75180895_75184285_1	chr9	+	493	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	41466	27066	41466	-27066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGAAGCTGGAAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	75180894	75184285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75181003_75182752_75182919_75183183_75183331_75184213
ENSMUSG00000033590.9_75180966_75184327_1	chr9	+	464	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	41537	27024	41537	-27024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGCACAGCTATGAAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	75180965	75184327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75181003_75182752_75182919_75183183_75183331_75184213
ENSMUSG00000033590.9_75183241_75189192_1	chr9	+	488	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	43812	22159	43812	-22159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCTCAAGGACGAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	75183240	75189192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117
ENSMUSG00000033590.9_75183314_75189234_1	chr9	+	457	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	43885	22117	43885	-22117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGACAGGTCACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	75183313	75189234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117
ENSMUSG00000033590.9_75184304_75191232_1	chr9	+	472	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	44875	20119	44875	-20119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCACGTGCAGTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	75184303	75191232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174
ENSMUSG00000033590.9_75189122_75193729_1	chr9	+	453	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	49693	17622	49693	-17622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGAAAAAGAGATTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	75189121	75193729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692
ENSMUSG00000033590.9_75189162_75193790_1	chr9	+	474	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	49733	17561	49733	-17561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGCAGAAGCTGTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	75189161	75193790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692
ENSMUSG00000033590.9_75189226_75193835_1	chr9	+	455	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	49797	17516	49797	-17516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGGCATGAAGTCACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	75189225	75193835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692
ENSMUSG00000033590.9_75191214_75195410_1	chr9	+	461	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	51785	15941	51785	-15941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAGATAGAAGGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	75191213	75195410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330
ENSMUSG00000033590.9_75192253_75196416_1	chr9	+	458	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	52824	14935	52824	-14935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATCAAGTTCCCAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	75192252	75196416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75192296_75193692_75193874_75195330_75195489_75196340
ENSMUSG00000033590.9_75193784_75198186_1	chr9	+	473	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	54355	13165	54355	-13165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAAGACTCTGACCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	75193783	75198186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75193874_75195330_75195489_75196340_75196510_75198130
ENSMUSG00000033590.9_75195382_75201228_1	chr9	+	484	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	55953	10123	55953	-10123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGAACATGATCCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	75195381	75201228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75195489_75196340_75196510_75198130_75198219_75199435_75199535_75201207
ENSMUSG00000033590.9_75195447_75201277_1	chr9	+	468	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	56018	10074	56018	-10074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGATACGCGGACTCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	75195446	75201277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75195489_75196340_75196510_75198130_75198219_75199435_75199535_75201207
ENSMUSG00000033590.9_75196440_75202491_1	chr9	+	460	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	57011	8860	57011	-8860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTTTCTTAACTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75196439	75202491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443
ENSMUSG00000033590.9_75198146_75203352_1	chr9	+	478	5	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	58717	7999	58717	-7999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATACAGACAGATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	75198145	75203352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291
ENSMUSG00000033590.9_75201246_75204796_1	chr9	+	469	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	61817	6555	61817	-6555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCTGCAGCAGCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	75201245	75204796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75201363_75202443_75202534_75203291_75203443_75204685
ENSMUSG00000033590.9_75201308_75204837_1	chr9	+	448	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	61879	6514	61879	-6514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACGGCCTGGACCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	75201307	75204837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75201363_75202443_75202534_75203291_75203443_75204685
ENSMUSG00000033590.9_75202441_75204968_1	chr9	+	527	3	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	63012	6383	63012	-6383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAACCCACATGCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	75202440	75204968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75202534_75203291_75203443_75204685
ENSMUSG00000033590.9_75203309_75208128_1	chr9	+	458	3	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	63880	3223	63880	-3223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCAGAGTAGCTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	75203308	75208128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75203443_75204685_75204969_75208087
ENSMUSG00000033590.9_75203353_75208187_1	chr9	+	473	3	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	63924	3164	63924	-3164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCAGGTGAAGAAGACCAC	NA	NA	NA	NA	NA	NA	NA	NA	75203352	75208187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75203443_75204685_75204969_75208087
ENSMUSG00000033590.9_75203408_75208235_1	chr9	+	466	3	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	63979	3116	63979	-3116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCACTTCCCTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	75203407	75208235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75203443_75204685_75204969_75208087
ENSMUSG00000033590.9_75204814_75211273_1	chr9	+	473	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	65385	78	65385	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCACATTTCCTTTCACCG	NA	NA	NA	NA	NA	NA	NA	NA	75204813	75211273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75204969_75208087_75208263_75208685_75208767_75211211
ENSMUSG00000033590.9_75204874_75211318_1	chr9	+	458	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	65445	33	65445	-33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGATCCCCAGCAGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	75204873	75211318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75204969_75208087_75208263_75208685_75208767_75211211
ENSMUSG00000033590.9_75204944_75211351_1	chr9	+	421	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	65515	0	65515	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGAGACTGTAGCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	75204943	75211351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75204969_75208087_75208263_75208685_75208767_75211211
ENSMUSG00000033623.14_108609179_108621776_1	chr5	+	433	3	FSM	ENSMUSG00000033623.14	ENST00000400151.6	475	3	43	-1	43	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGCCAGTTCTACCGTG	NA	NA	NA	NA	NA	NA	NA	NA	108609178	108621776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_108609322_108620215_108620384_108621654
ENSMUSG00000033628.16_30407356_30445631_1	chr18	+	1515	14	ISM	ENSMUSG00000033628.16	ENSMUST00000115811.8	3084	22	1433	18390	34	-18390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCTGGCGGCTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	30407355	30445631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_30407511_30410024_30410169_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604
ENSMUSG00000033628.16_30407474_30449917_1	chr18	+	1509	15	ISM	ENSMUSG00000033628.16	ENSMUST00000115811.8	3084	22	1551	14104	152	-14104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAGATAATGAGAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	30407473	30449917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_30407511_30410024_30410169_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895
ENSMUSG00000033628.16_30410108_30452589_1	chr18	+	1535	15	ISM	ENSMUSG00000033628.16	ENSMUST00000115811.8	3084	22	4185	11432	2786	-11432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATGGAGGCAAATACCC	NA	NA	NA	NA	NA	NA	NA	NA	30410107	30452589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_30410169_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553
ENSMUSG00000033628.16_30415089_30453317_1	chr18	+	1519	15	ISM	ENSMUSG00000033628.16	ENSMUST00000115811.8	3084	22	9166	10704	7767	-10704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCCATACAAGGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	30415088	30453317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286
ENSMUSG00000033628.16_30421802_30455287_1	chr18	+	1574	15	ISM	ENSMUSG00000033628.16	ENSMUST00000115811.8	3084	22	15879	8734	14480	-8734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATGACGTCATCACGGAA	NA	NA	NA	NA	NA	NA	NA	NA	30421801	30455287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222
ENSMUSG00000033628.16_30423522_30456659_1	chr18	+	1572	15	ISM	ENSMUSG00000033628.16	ENSMUST00000115811.8	3084	22	17599	7362	16200	-7362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCGTTTTGGGGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	30423521	30456659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574
ENSMUSG00000033628.16_30426110_30457671_1	chr18	+	1551	15	ISM	ENSMUSG00000033628.16	ENSMUST00000115811.8	3084	22	20187	6350	18788	-6350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAACAAGTCAGAAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	30426109	30457671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596
ENSMUSG00000033628.16_30426160_30466236_1	chr18	+	1524	16	ISM	ENSMUSG00000033628.16	ENSMUST00000091978.12	2998	24	20235	9933	18838	2215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATATTTTGGGTCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	30426159	30466236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213
ENSMUSG00000033628.16_30426708_30466288_1	chr18	+	1516	15	ISM	ENSMUSG00000033628.16	ENSMUST00000091978.12	2998	24	20783	9881	19386	2267	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGAGATGGTGGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	30426707	30466288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213
ENSMUSG00000033628.16_30426759_30466343_1	chr18	+	1520	15	ISM	ENSMUSG00000033628.16	ENSMUST00000091978.12	2998	24	20834	9826	19437	2322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAAAGCAGTGCTACACAG	NA	NA	NA	NA	NA	NA	NA	NA	30426758	30466343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213
ENSMUSG00000033628.16_30427389_30469237_1	chr18	+	1632	15	ISM	ENSMUSG00000033628.16	ENSMUST00000091978.12	2998	24	21464	6932	20067	-2	internal_fragment	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTTTTTTTAATATAAC	NA	NA	NA	NA	NA	NA	NA	NA	30427388	30469237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146
ENSMUSG00000033628.16_30431626_30469237_1	chr18	+	1539	14	ISM	ENSMUSG00000033628.16	ENSMUST00000091978.12	2998	24	25701	6932	24304	-2	internal_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTTTTTTTAATATAAC	NA	NA	NA	NA	NA	NA	NA	NA	30431625	30469237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146
ENSMUSG00000033629.7_64895291_64897628_1	chr9	-	551	2	ISM	ENSMUSG00000033629.7	ENST00000442729.6	1285	10	31348	-234	31347	234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCAGGCATTGAAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	64897628	64895290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64895812_64897598
ENSMUSG00000033629.7_64895346_64897689_1	chr9	-	557	2	ISM	ENSMUSG00000033629.7	ENST00000442729.6	1285	10	31287	-179	31286	179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAACACTTCATATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	64897689	64895345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64895812_64897598
ENSMUSG00000033629.7_64895515_64911590_1	chr9	-	940	7	ISM	ENSMUSG00000033629.7	ENST00000442729.6	1285	10	17386	-10	17385	10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCCCTCTTCATGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	64911590	64895514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64895812_64897598_64897731_64898255_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538
ENSMUSG00000033629.7_64895747_64928797_1	chr9	-	884	10	FSM	ENSMUSG00000033629.7	ENST00000442729.6	1285	10	179	222	178	-222	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTCCACTAAAGATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	64928797	64895746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_64895812_64897598_64897731_64898255_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64913842_64913917_64917755_64917799_64928738
ENSMUSG00000033629.7_64897676_64928975_1	chr9	-	920	9	ISM	ENSMUSG00000033629.7	ENST00000442729.6	1285	10	1	2151	0	-2151	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGCCATATCCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	64928975	64897675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64897731_64898255_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64913842_64913917_64917755_64917799_64928738
ENSMUSG00000033629.7_64898287_64912971_1	chr9	-	562	6	ISM	ENSMUSG00000033629.7	ENSMUST00000036615.7	2709	11	16004	4022	16004	-2762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTTATATCCCCTGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	64912971	64898286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64912889
ENSMUSG00000033629.7_64898343_64913022_1	chr9	-	557	6	ISM	ENSMUSG00000033629.7	ENSMUST00000036615.7	2709	11	15953	4078	15953	-2818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCATTGACATGGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	64913022	64898342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64912889
ENSMUSG00000033629.7_64899599_64913905_1	chr9	-	572	6	ISM	ENSMUSG00000033629.7	ENSMUST00000036615.7	2709	11	15070	5334	15070	-4074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAACAAAGCTGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	64913905	64899598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64912889_64913055_64913842
ENSMUSG00000033629.7_64905537_64928795_1	chr9	-	570	7	ISM	ENSMUSG00000033629.7	ENSMUST00000036615.7	2709	11	180	11272	180	-10012	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCTCAATGCTGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	64928795	64905536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64905605_64908262_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
ENSMUSG00000033629.7_64908353_64928975_1	chr9	-	592	6	ISM	ENSMUSG00000033629.7	ENSMUST00000036615.7	2709	11	0	14088	0	-12828	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACCTGTTCATGTACAAC	NA	NA	NA	NA	NA	NA	NA	NA	64928975	64908352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
ENSMUSG00000033633.16_111796388_111808612_1	chr8	-	1409	12	FSM	ENSMUSG00000033633.16	ENST00000314151.12	1432	12	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACGCTGGGTAAGATAGT	NA	NA	NA	NA	NA	NA	NA	NA	111808612	111796387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_111796560_111797316_111797409_111798220_111798318_111798617_111798748_111799253_111799361_111800280_111800374_111801779_111801888_111802047_111802170_111802657_111802756_111805379_111805623_111807471_111807547_111808540
ENSMUSG00000033633.16_111796521_111798239_1	chr8	-	179	3	ISM	ENSMUSG00000033633.16	ENST00000339953.9	1385	11	9326	133	9326	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCCAATCAGCTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	111798239	111796520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111796560_111797316_111797409_111798191
ENSMUSG00000033633.16_111797381_111798641_1	chr8	-	178	3	ISM	ENSMUSG00000033633.16	ENST00000339953.9	1385	11	8924	993	8924	-993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGCCTTCAACTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	111798641	111797380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111797409_111798191_111798318_111798617
ENSMUSG00000033633.16_111799329_111801821_1	chr8	-	167	3	ISM	ENSMUSG00000033633.16	ENST00000339953.9	1385	11	5744	2941	5744	-2941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGATTGACGGAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	111801821	111799328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111799361_111800280_111800374_111801779
ENSMUSG00000033633.16_111802691_111805491_1	chr8	-	177	2	ISM	ENSMUSG00000033633.16	ENST00000339953.9	1385	11	2074	6303	2074	-6303	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGAAGCCTTTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	111805491	111802690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111802756_111805379
ENSMUSG00000033644.6_70611662_70635697_1	chr14	-	1300	9	ISM	ENSMUSG00000033644.6	ENST00000521356.5	2998	21	28484	89	28484	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGGCAGTGGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	70635697	70611661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70611886_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592
ENSMUSG00000033644.6_70611772_70637238_1	chr14	-	1281	10	ISM	ENSMUSG00000033644.6	ENST00000521356.5	2998	21	26943	199	26943	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAGCCATCCAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	70637238	70611771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70611886_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183
ENSMUSG00000033644.6_70614173_70639551_1	chr14	-	1295	11	ISM	ENSMUSG00000033644.6	ENST00000356766.11	3106	22	24630	2600	24630	-2600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTTCGTAACCCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	70639551	70614172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482
ENSMUSG00000033644.6_70629972_70648700_1	chr14	-	1304	11	ISM	ENSMUSG00000033644.6	ENST00000356766.11	3106	22	15481	18399	15481	-18399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAAGAAGCTGTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	70648700	70629971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582
ENSMUSG00000033644.6_70631566_70658967_1	chr14	-	1321	12	ISM	ENSMUSG00000033644.6	ENST00000356766.11	3106	22	5214	19993	5214	-19993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGGGCCCATTGGCATGC	NA	NA	NA	NA	NA	NA	NA	NA	70658967	70631565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897
ENSMUSG00000033644.6_70635628_70660148_1	chr14	-	1298	11	ISM	ENSMUSG00000033644.6	ENST00000356766.11	3106	22	4033	24055	4033	-24055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGGGCTCAGTCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	70660148	70635627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076
ENSMUSG00000033644.6_70637183_70660431_1	chr14	-	1348	11	ISM	ENSMUSG00000033644.6	ENSMUST00000048129.6	4916	23	6112	27257	3750	-25610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGAGTCTTGCTGTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	70660431	70637182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343
ENSMUSG00000033644.6_70638882_70664035_1	chr14	-	1322	11	ISM	ENSMUSG00000033644.6	ENSMUST00000048129.6	4916	23	2508	28956	146	-27309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACCATGGCATGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	70664035	70638881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955
ENSMUSG00000033653.19_21261107_21400420_1	chr16	+	3456	39	ISM	ENSMUSG00000033653.19	ENST00000446204.6	3874	43	6605	62612	6605	2423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAAGGACGGATAACCT	NA	NA	NA	NA	NA	NA	NA	NA	21261106	21400420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282
ENSMUSG00000033653.19_21274978_21463033_1	chr16	+	3493	38	ISM	ENSMUSG00000033653.19	ENST00000446204.6	3874	43	20476	-1	20476	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAAGCTGCAGGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	21274977	21463033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ENSMUSG00000033658.17_111734701_111750646_1	chr8	-	1471	10	FSM	ENSMUSG00000033658.17	ENST00000451014.7	1471	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTACACAACTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	111750646	111734700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747591_111747728_111749032_111749087_111750597
ENSMUSG00000033684.15_155653905_155668030_1	chr1	-	1867	9	ISM	ENSMUSG00000033684.15	ENSMUST00000194632.2	2433	13	20560	-3	20560	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGTGTTTGACTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	155668030	155653904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_155654598_155655463_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939
ENSMUSG00000033684.15_155654093_155679466_1	chr1	-	1852	12	ISM	ENSMUSG00000033684.15	ENSMUST00000194632.2	2433	13	9124	185	9124	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCTCTAAAATCAATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	155679466	155654092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_155654598_155655463_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442
ENSMUSG00000033684.15_155654309_155688390_1	chr1	-	1832	13	FSM	ENSMUSG00000033684.15	ENSMUST00000194632.2	2433	13	200	401	200	-401	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTCTGGTCACCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	155688390	155654308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_155654598_155655463_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442_155679544_155688271
ENSMUSG00000033684.15_155654422_155688566_1	chr1	-	1895	13	FSM	ENSMUSG00000033684.15	ENSMUST00000194632.2	2433	13	24	514	24	-514	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCTCACGACATGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	155688566	155654421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_155654598_155655463_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442_155679544_155688271
ENSMUSG00000033685.14_100143513_100148509_1	chr7	+	1049	7	ISM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	969	2718	969	-2718	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGCCCTAATGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	100143512	100148509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_100143583_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ENSMUSG00000033685.14_100146032_100148646_1	chr7	+	1017	6	ISM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	3488	2581	3488	-2581	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACCCCGATTTACTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	100146031	100148646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ENSMUSG00000033685.14_100146102_100148710_1	chr7	+	1011	6	ISM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	3558	2517	3558	-2517	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTGACACCAGACCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	100146101	100148710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ENSMUSG00000033685.14_100146403_100148875_1	chr7	+	1021	5	ISM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	3859	2352	3859	-2352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTTCAGGACCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	100146402	100148875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ENSMUSG00000033685.14_100146475_100148912_1	chr7	+	986	5	ISM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	3931	2315	3931	-2315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTCTTTAAAAAGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	100146474	100148912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ENSMUSG00000033685.14_100147553_100149202_1	chr7	+	1045	3	ISM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	5009	2025	5009	-2025	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTTGGGGGGGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	100147552	100149202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_100147657_100147942_100148124_100148442
ENSMUSG00000033685.14_100148089_100149456_1	chr7	+	1049	2	ISM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	5545	1771	5545	-1771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCGCTGTGTAGTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	100148088	100149456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_100148124_100148442
ENSMUSG00000033701.14_155434121_155563294_1	chr1	+	1557	8	FSM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	253	3782	249	-3782	multi-exon	TRUE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCTGTGAAGTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	155434120	155563294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
ENSMUSG00000033701.14_155434389_155563558_1	chr1	+	1553	8	FSM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	521	3518	517	-3518	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGGGAAGGGGATAGGG	NA	NA	NA	NA	NA	NA	NA	NA	155434388	155563558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
ENSMUSG00000033701.14_155440427_155563799_1	chr1	+	1553	7	ISM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	6559	3277	6555	-3277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAATGAAAGAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	155440426	155563799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_155440468_155443330_155443428_155477199_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
ENSMUSG00000033701.14_155491649_155564117_1	chr1	+	1614	4	ISM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	57781	2959	57777	-2959	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGGGGGTAATTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	155491648	155564117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_155491719_155500614_155500705_155552949_155552981_155562694
ENSMUSG00000033705.18_120464692_120501596_1	chr2	+	440	6	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	2790	30894	2790	-30894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGCTCCTGGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	120464691	120501596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120464771_120495360_120495478_120496853_120496887_120496974_120497037_120498483_120498597_120501560
ENSMUSG00000033705.18_120495360_120504125_1	chr2	+	438	6	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	33458	28365	33458	-28365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCCATCTTCACTATCC	NA	NA	NA	NA	NA	NA	NA	NA	120495359	120504125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120495478_120496853_120496887_120496974_120497037_120498483_120498597_120501560_120501631_120504083
ENSMUSG00000033705.18_120496973_120509931_1	chr2	+	486	6	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	35071	22559	35071	-22559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTTGGTAATAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	120496972	120509931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120497037_120498483_120498597_120501560_120501631_120504083_120504157_120508395_120508464_120509833
ENSMUSG00000033705.18_120498513_120510373_1	chr2	+	478	6	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	36611	22117	36611	-22117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGGGCCAGCAGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	120498512	120510373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120498597_120501560_120501631_120504083_120504157_120508395_120508464_120509833_120509932_120510288
ENSMUSG00000033705.18_120498584_120510409_1	chr2	+	443	6	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	36682	22081	36682	-22081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCGTACATCCCATACC	NA	NA	NA	NA	NA	NA	NA	NA	120498583	120510409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120498597_120501560_120501631_120504083_120504157_120508395_120508464_120509833_120509932_120510288
ENSMUSG00000033705.18_120504099_120510679_1	chr2	+	465	5	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	42197	21811	42197	-21811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCATGAGTACAATGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	120504098	120510679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120504157_120508395_120508464_120509833_120509932_120510288_120510499_120510648
ENSMUSG00000033705.18_120509875_120514167_1	chr2	+	457	5	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	47973	18323	47973	-18323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAATGATGATCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	120509874	120514167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120509932_120510288_120510499_120510648_120510747_120513204_120513283_120514153
ENSMUSG00000033705.18_120510373_120515408_1	chr2	+	446	5	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	48471	17082	48471	-17082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATCAACAGGAAGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	120510372	120515408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120510499_120510648_120510747_120513204_120513283_120514153_120514226_120515336
ENSMUSG00000033705.18_120510436_120515468_1	chr2	+	443	5	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	48534	17022	48534	-17022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGGATGATGTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	120510435	120515468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120510499_120510648_120510747_120513204_120513283_120514153_120514226_120515336
ENSMUSG00000033705.18_120510649_120518251_1	chr2	+	480	5	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	48747	14239	48747	-14239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTGACCACACATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	120510648	120518251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120510747_120513204_120513283_120514153_120514226_120515336_120515517_120518199
ENSMUSG00000033705.18_120513210_120518627_1	chr2	+	441	5	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	51308	13863	51308	-13863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCGGCCTACCCAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	120513209	120518627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120513283_120514153_120514226_120515336_120515517_120518199_120518252_120518563
ENSMUSG00000033705.18_120515356_120519410_1	chr2	+	454	5	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	53454	13080	53454	-13080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGTGGCTCTTTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	120515355	120519410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120515517_120518199_120518252_120518563_120518702_120519222_120519309_120519393
ENSMUSG00000033705.18_120515465_120523181_1	chr2	+	453	6	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	53563	9309	53563	-9309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGGGACCAGCAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	120515464	120523181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120515517_120518199_120518252_120518563_120518702_120519222_120519309_120519393_120519498_120523160
ENSMUSG00000033705.18_120518668_120523351_1	chr2	+	415	4	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	56766	9139	56766	-9139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGCCCTCCTCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	120518667	120523351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120518702_120519222_120519309_120519393_120519498_120523160
ENSMUSG00000033705.18_120519241_120523907_1	chr2	+	459	4	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	57339	8583	57339	-8583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCACCTGATGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	120519240	120523907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120519309_120519393_120519498_120523160_120523352_120523811
ENSMUSG00000033705.18_120519479_120524048_1	chr2	+	447	3	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	57577	8442	57577	-8442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTATCATTCCAGCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	120519478	120524048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120519498_120523160_120523352_120523811
ENSMUSG00000033705.18_120523234_120524164_1	chr2	+	471	2	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	61332	8326	61332	-8326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTGGGCCTCTAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	120523233	120524164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120523352_120523811
ENSMUSG00000033705.18_120523300_120524201_1	chr2	+	442	2	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	61398	8289	61398	-8289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTCAGCGGAGAAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	120523299	120524201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120523352_120523811
ENSMUSG00000033705.18_120523996_120526376_1	chr2	+	443	2	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	62094	6114	62094	-6114	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCAGCCAGGAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	120523995	120526376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120524287_120526224
ENSMUSG00000033705.18_120524142_120526524_1	chr2	+	445	2	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	62240	5966	62240	-5966	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCAAGGACCTTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	120524141	120526524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120524287_120526224
ENSMUSG00000033705.18_120524204_120526580_1	chr2	+	439	2	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	62302	5910	62302	-5910	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTGGATGGCAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	120524203	120526580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120524287_120526224
ENSMUSG00000033706.14_85408971_85421970_1	chr6	+	1119	12	ISM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	0	1447	0	-1447	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAACTGGGGACATGGT	NA	NA	NA	NA	NA	NA	NA	NA	85408970	85421970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899
ENSMUSG00000033706.14_85415144_85422179_1	chr6	+	1082	12	ISM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	6173	1238	6173	-1238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATGACCGACGTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	85415143	85422179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ENSMUSG00000033706.14_85415765_85422301_1	chr6	+	1116	11	ISM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	6794	1116	6794	-1116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTTTCTCCCTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	85415764	85422301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ENSMUSG00000033706.14_85415839_85422414_1	chr6	+	1155	11	ISM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	6868	1003	6868	-1003	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCATCACAAGCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	85415838	85422414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ENSMUSG00000033706.14_85417638_85422589_1	chr6	+	1092	8	ISM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	8667	828	8667	-828	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAACATAATGGCCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	85417637	85422589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ENSMUSG00000033706.14_85417694_85422637_1	chr6	+	1084	8	ISM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	8723	780	8723	-780	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTGATGTGAAGCCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	85417693	85422637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ENSMUSG00000033706.14_85419157_85422885_1	chr6	+	1101	5	ISM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	10186	532	10186	-532	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTGATAAGGTGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	85419156	85422885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ENSMUSG00000033712.7_70375613_70376707_1	chr14	-	873	2	ISM	ENSMUSG00000033712.7	ENST00000389279.7	3875	21	14136	-4	14136	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGTCTTTGTAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	70376707	70375612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70376397_70376618
ENSMUSG00000033712.7_70375838_70377013_1	chr14	-	838	3	ISM	ENSMUSG00000033712.7	ENST00000389279.7	3875	21	13830	221	13830	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCCCAACTTGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	70377013	70375837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70376397_70376618_70376825_70376940
ENSMUSG00000033712.7_70375897_70377073_1	chr14	-	839	3	ISM	ENSMUSG00000033712.7	ENST00000389279.7	3875	21	13770	280	13770	-280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCATTCAAGGAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	70377073	70375896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70376397_70376618_70376825_70376940
ENSMUSG00000033712.7_70376028_70377277_1	chr14	-	833	4	ISM	ENSMUSG00000033712.7	ENST00000389279.7	3875	21	13566	411	13566	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCATTTCCAGCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	70377277	70376027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208
ENSMUSG00000033712.7_70376356_70378386_1	chr14	-	848	7	ISM	ENSMUSG00000033712.7	ENST00000389279.7	3875	21	12457	739	12457	-739	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGGCTGCCTAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	70378386	70376355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316
ENSMUSG00000033712.7_70376754_70379132_1	chr14	-	820	7	ISM	ENSMUSG00000033712.7	ENST00000389279.7	3875	21	11711	1137	11711	-1137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCCCGGCTGGCCGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	70379132	70376753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059
ENSMUSG00000033712.7_70376987_70379256_1	chr14	-	827	6	ISM	ENSMUSG00000033712.7	ENST00000389279.7	3875	21	11587	1370	11587	-1370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCCTATACCTGGAGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	70379256	70376986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059
ENSMUSG00000033712.7_70377509_70379869_1	chr14	-	828	6	ISM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	11391	1892	10974	-1892	internal_fragment	TRUE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCTACTTGCACAGGC	NA	NA	NA	NA	NA	NA	NA	NA	70379869	70377508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808
ENSMUSG00000033712.7_70378361_70380461_1	chr14	-	826	5	ISM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	10799	2744	10382	-2744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGACCTGCTGCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	70380461	70378360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373
ENSMUSG00000033712.7_70378400_70380537_1	chr14	-	863	5	ISM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	10723	2783	10306	-2783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGAGGCGGCTGAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	70380537	70378399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373
ENSMUSG00000033712.7_70379199_70381089_1	chr14	-	829	6	ISM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	10171	3582	9754	-3582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCTGAACCTGAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	70381089	70379198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036
ENSMUSG00000033712.7_70379254_70381142_1	chr14	-	827	6	ISM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	10118	3637	9701	-3637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGGCTATAGAATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	70381142	70379253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036
ENSMUSG00000033712.7_70379502_70383323_1	chr14	-	823	6	ISM	ENSMUSG00000033712.7	ENST00000389279.7	3875	21	7520	3885	7520	-3885	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCCGCCTCCTCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	70383323	70379501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291
ENSMUSG00000033712.7_70379543_70383386_1	chr14	-	845	6	ISM	ENSMUSG00000033712.7	ENST00000389279.7	3875	21	7457	3926	7457	-3926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCACCACACAGCAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	70383386	70379542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291
ENSMUSG00000033712.7_70379930_70388778_1	chr14	-	825	7	ISM	ENSMUSG00000033712.7	ENST00000389279.7	3875	21	2065	4313	2065	-4313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACAGTAGTGGTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	70388778	70379929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722
ENSMUSG00000033712.7_70380407_70389035_1	chr14	-	841	7	ISM	ENSMUSG00000033712.7	ENST00000389279.7	3875	21	1808	4790	1808	-4790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGCATTGACTTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	70389035	70380406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009
ENSMUSG00000033712.7_70380474_70389069_1	chr14	-	808	7	ISM	ENSMUSG00000033712.7	ENST00000389279.7	3875	21	1774	4857	1774	-4857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCTCGACCCCCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	70389069	70380473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009
ENSMUSG00000033712.7_70380870_70389420_1	chr14	-	869	7	ISM	ENSMUSG00000033712.7	ENST00000389279.7	3875	21	1423	5253	1423	-5253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCCTCTGAAGCAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	70389420	70380869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328
ENSMUSG00000033712.7_70381121_70390189_1	chr14	-	862	8	ISM	ENSMUSG00000033712.7	ENST00000389279.7	3875	21	654	5504	654	-5504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTCTCTTCAGAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	70390189	70381120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112
ENSMUSG00000033712.7_70381229_70390560_1	chr14	-	823	9	ISM	ENSMUSG00000033712.7	ENST00000389279.7	3875	21	283	5612	283	-5612	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTACCGCAGCCTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	70390560	70381228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70390508
ENSMUSG00000033712.7_70383380_70390694_1	chr14	-	838	8	ISM	ENSMUSG00000033712.7	ENST00000389279.7	3875	21	149	7763	149	-7763	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGCGGAGAGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	70390694	70383379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70390508
ENSMUSG00000033713.13_99162530_99307796_1	chr12	-	896	5	ISM	ENSMUSG00000033713.13	ENST00000325117.8	1435	6	47365	0	47365	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACAAGTCTCTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	99307796	99162529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_99163073_99175719_99175826_99185856_99185923_99257495_99257561_99307680
ENSMUSG00000033713.13_99162670_99354711_1	chr12	-	845	6	FSM	ENSMUSG00000033713.13	ENST00000325117.8	1435	6	450	140	450	-140	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCGCCCGAGAGCGATGA	NA	NA	NA	NA	NA	NA	NA	NA	99354711	99162669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_99163073_99175719_99175826_99185856_99185923_99257495_99257561_99307680_99307794_99354619
ENSMUSG00000033713.13_99162670_99354836_1	chr12	-	962	6	NNC	ENSMUSG00000033713.13	novel	1435	6	NA	NA	325	-140	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCGCCCGAGAGCGATGA	NA	NA	NA	NA	NA	NA	NA	NA	99354836	99162669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_99163073_99175719_99175826_99185856_99185923_99257495_99257553_99307680_99307794_99354619
ENSMUSG00000033713.13_99162929_99355010_1	chr12	-	879	6	NNC	ENSMUSG00000033713.13	novel	1435	6	NA	NA	151	-399	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCTCTTCCTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	99355010	99162928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_99163067_99175719_99175826_99185856_99185923_99257495_99257561_99307680_99307794_99354619
ENSMUSG00000033720.13_85192651_85310409_2	chr6	-	839	12	FSM	ENSMUSG00000033720.13	ENST00000410065.5	846	12	7	0	-5	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGACCAGCCGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	85310409	85192650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_85192729_85206175_85206294_85233324_85233416_85244853_85244920_85246079_85246137_85246891_85246946_85264031_85264058_85266158_85266214_85266743_85266771_85276521_85276600_85296503_85296573_85310289
ENSMUSG00000033720.13_85192651_85310409_4	chr6	-	834	12	NNC	ENSMUSG00000033720.13	novel	846	12	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGACCAGCCGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	85310409	85192650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_85192729_85206175_85206289_85233324_85233416_85244853_85244920_85246079_85246137_85246891_85246946_85264031_85264058_85266158_85266214_85266743_85266771_85276521_85276600_85296503_85296573_85310289
ENSMUSG00000033732.11_111537495_111540355_1	chr8	-	668	5	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	33053	624	33053	-624	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGATGTGGTATTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	111540355	111537494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254
ENSMUSG00000033732.11_111537552_111540432_1	chr8	-	688	5	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	32976	681	32976	-681	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGAGAGCCCCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	111540432	111537551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254
ENSMUSG00000033732.11_111537619_111540467_1	chr8	-	656	5	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	32941	748	32941	-748	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCCAAGAAGCTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	111540467	111537618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254
ENSMUSG00000033732.11_111538642_111542661_1	chr8	-	678	5	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	30747	1771	30747	-1771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCCTTGTCCCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	111542661	111538641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534
ENSMUSG00000033732.11_111540339_111544230_1	chr8	-	673	5	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	29178	3468	29178	-3468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATCCCAGATGGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	111544230	111540338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175
ENSMUSG00000033732.11_111540403_111544292_1	chr8	-	671	5	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	29116	3532	29116	-3532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGTTTCATCTGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	111544292	111540402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175
ENSMUSG00000033732.11_111542614_111548157_1	chr8	-	672	5	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	25251	5743	25251	-5743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCGATCTGTGGCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	111548157	111542613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099
ENSMUSG00000033732.11_111542864_111550110_1	chr8	-	686	5	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	23298	5993	23298	-5993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTCGGGTGATGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	111550110	111542863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006
ENSMUSG00000033732.11_111544221_111550935_1	chr8	-	691	5	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	22473	7350	22473	-7350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTGAGGCCACAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	111550935	111544220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796
ENSMUSG00000033732.11_111547368_111552281_1	chr8	-	697	5	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	21127	10497	21127	-10497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGCCATCTCCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	111552281	111547367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133
ENSMUSG00000033732.11_111550069_111560468_1	chr8	-	676	6	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	12940	13198	12940	-13198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGATGAGCTGGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	111560468	111550068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411
ENSMUSG00000033732.11_111550877_111562315_1	chr8	-	688	6	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	11093	14006	11093	-14006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGGAGAACAGCGATCT	NA	NA	NA	NA	NA	NA	NA	NA	111562315	111550876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180
ENSMUSG00000033732.11_111552828_111566553_1	chr8	-	678	7	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	6855	15957	6855	-15957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTATCGGAGAGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	111566553	111552827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503
ENSMUSG00000033732.11_111560429_111567821_1	chr8	-	680	6	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	5587	23558	5587	-23558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGCATGGACTTGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	111567821	111560428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741
ENSMUSG00000033732.11_111562244_111568495_1	chr8	-	693	6	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	4913	25373	4913	-25373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTCAAAAATCTCGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	111568495	111562243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402
ENSMUSG00000033760.18_4806609_4812302_1	chr19	+	803	3	FSM	ENSMUSG00000033760.18	ENSMUST00000182821.8	1443	3	38	602	10	-602	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCCGCATACAATTACG	NA	NA	NA	NA	NA	NA	NA	NA	4806608	4812302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4806690_4807273_4807698_4812004
ENSMUSG00000033760.18_4807317_4812447_1	chr19	+	824	2	ISM	ENSMUSG00000033760.18	ENSMUST00000182821.8	1443	3	746	457	45	-457	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCAATGGCTGCTGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	4807316	4812447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4807698_4812004
ENSMUSG00000033760.18_4807388_4815657_1	chr19	+	596	2	FSM	ENSMUSG00000033760.18	ENST00000531969.5	710	2	116	-2	116	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTTTCTTAGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	4807387	4815657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4807698_4815371
ENSMUSG00000033760.18_4807653_4815495_1	chr19	+	840	3	ISM	ENSMUSG00000033760.18	ENSMUST00000036744.8	1783	4	1054	473	381	-160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTTTCTTTCTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	4807652	4815495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4807698_4812004_4812676_4815371
ENSMUSG00000033760.18_4812487_4815964_1	chr19	+	782	2	ISM	ENSMUSG00000033760.18	ENSMUST00000036744.8	1783	4	5888	4	5215	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCTTTTCTTAACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	4812486	4815964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4812676_4815371
ENSMUSG00000033762.9_76587941_76590703_1	chr15	-	1794	11	ISM	ENSMUSG00000033762.9	ENSMUST00000036852.9	3896	22	4030	188	844	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTTACATGGGAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	76590703	76587940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616
ENSMUSG00000033762.9_76587941_76590761_1	chr15	-	1852	11	ISM	ENSMUSG00000033762.9	ENSMUST00000036852.9	3896	22	3972	188	786	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTTACATGGGAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	76590761	76587940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616
ENSMUSG00000033762.9_76588485_76591266_1	chr15	-	1734	11	ISM	ENSMUSG00000033762.9	ENSMUST00000036852.9	3896	22	3467	732	281	-530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGACGGACACTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	76591266	76588484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236
ENSMUSG00000033762.9_76588535_76591326_1	chr15	-	1744	11	ISM	ENSMUSG00000033762.9	ENSMUST00000036852.9	3896	22	3407	782	221	-580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGACCCTGGTCAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	76591326	76588534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236
ENSMUSG00000033762.9_76588716_76591507_1	chr15	-	1745	11	ISM	ENSMUSG00000033762.9	ENSMUST00000036852.9	3896	22	3226	963	40	-761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGCCCACCTACACCAA	NA	NA	NA	NA	NA	NA	NA	NA	76591507	76588715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451
ENSMUSG00000033769.17_84598343_84867567_1	chr6	-	1614	15	ISM	ENSMUSG00000033769.17	ENSMUST00000160197.6	5439	22	178928	2874	178820	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTGCTGTAGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	84867567	84598342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498
ENSMUSG00000033769.17_84602102_84885143_1	chr6	-	1517	15	ISM	ENSMUSG00000033769.17	ENST00000634650.1	2461	22	161244	3759	161244	-3759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAATCCTGTACTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	84885143	84602101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094
ENSMUSG00000033769.17_84602155_84885192_1	chr6	-	1513	15	ISM	ENSMUSG00000033769.17	ENST00000634650.1	2461	22	161195	3812	161195	-3812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATCTCCGGGTGAACC	NA	NA	NA	NA	NA	NA	NA	NA	84885192	84602154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094
ENSMUSG00000033769.17_84768223_84966330_1	chr6	-	1477	14	ISM	ENSMUSG00000033769.17	ENST00000634650.1	2461	22	80057	169880	80057	-169880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTGTGAACCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	84966330	84768222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306
ENSMUSG00000033769.17_84768266_84966408_1	chr6	-	1512	14	ISM	ENSMUSG00000033769.17	ENST00000634650.1	2461	22	79979	169923	79979	-169923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCATTGCAGCAGTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	84966408	84768265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306
ENSMUSG00000033769.17_84768309_84966468_1	chr6	-	1529	14	ISM	ENSMUSG00000033769.17	ENST00000634650.1	2461	22	79919	169966	79919	-169966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAACTTTTGCTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	84966468	84768308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306
ENSMUSG00000033769.17_84812141_84980244_1	chr6	-	1512	15	ISM	ENSMUSG00000033769.17	ENST00000634650.1	2461	22	66143	213798	66143	-213798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAGCTGGCTGACTACG	NA	NA	NA	NA	NA	NA	NA	NA	84980244	84812140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176
ENSMUSG00000033769.17_84821057_84988359_1	chr6	-	1515	16	ISM	ENSMUSG00000033769.17	ENST00000634650.1	2461	22	58028	222714	58028	-222714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCACTAATGTCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	84988359	84821056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299
ENSMUSG00000033769.17_84821099_84988426_1	chr6	-	1540	16	ISM	ENSMUSG00000033769.17	ENST00000634650.1	2461	22	57961	222756	57961	-222756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGGAGAAGTCCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	84988426	84821098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299
ENSMUSG00000033769.17_84828931_85046439_1	chr6	-	1504	15	ISM	ENSMUSG00000033769.17	ENST00000634650.1	2461	22	-52	230588	-52	-230588	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTTCCTTTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	85046439	84828930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ENSMUSG00000033770.14_141114650_141116688_1	chr4	-	234	3	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	8672	2062	8672	-2062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCAAGCCCTTCAGACC	NA	NA	NA	NA	NA	NA	NA	NA	141116688	141114649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141114689_141115444_141115579_141116627
ENSMUSG00000033770.14_141115537_141116807_1	chr4	-	222	2	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	8553	2949	8553	-2949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCACACTGGCCAAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	141116807	141115536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141115579_141116627
ENSMUSG00000033770.14_141116628_141117408_1	chr4	-	235	2	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	7952	4040	7952	-4040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCCTGGGACTGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	141117408	141116627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141116842_141117387
ENSMUSG00000033770.14_141116779_141117704_1	chr4	-	226	3	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	7656	4191	7656	-4191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGGCCAGATCGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	141117704	141116778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141116842_141117387_141117499_141117652
ENSMUSG00000033770.14_141116820_141118687_1	chr4	-	234	4	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	6673	4232	6673	-4232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGACCCACACCATCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	141118687	141116819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141116842_141117387_141117499_141117652_141117723_141118656
ENSMUSG00000033770.14_141117423_141118736_1	chr4	-	226	3	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	6624	4835	6624	-4835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCCCATCATGCCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	141118736	141117422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141117499_141117652_141117723_141118656
ENSMUSG00000033770.14_141117479_141118788_1	chr4	-	222	3	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	6572	4891	6572	-4891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGAGAGGCCCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	141118788	141117478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141117499_141117652_141117723_141118656
ENSMUSG00000033770.14_141121807_141122929_1	chr4	-	223	4	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	2431	9219	2431	-9219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAATTACTGGAGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	141122929	141121806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141121850_141122269_141122349_141122429_141122508_141122906
ENSMUSG00000033770.14_141122430_141124573_1	chr4	-	251	3	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	787	9842	787	-9842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGGGGGACAAGAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	141124573	141122429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141122508_141122906_141123047_141124540
ENSMUSG00000033770.14_141122999_141125300_1	chr4	-	218	3	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	60	10411	60	-10411	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTACCTAGACATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	141125300	141122998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141123047_141124540_141124670_141125259
ENSMUSG00000033773.15_107768323_107773770_1	chr5	+	399	3	ISM	ENSMUSG00000033773.15	ENST00000610020.2	1594	9	16926	29390	16926	-17018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTCTTCAGATTACAATG	NA	NA	NA	NA	NA	NA	NA	NA	107768322	107773770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_107768622_107771579_107771663_107773753
ENSMUSG00000033773.15_107768490_107803041_1	chr5	+	388	5	ISM	ENSMUSG00000033773.15	ENST00000610020.2	1594	9	17093	119	17093	-119	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGAAGCATTCTCCGAA	NA	NA	NA	NA	NA	NA	NA	NA	107768489	107803041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_107768622_107771579_107771663_107773753_107773839_107780928_107780998_107803022
ENSMUSG00000033773.15_107768551_107803091_1	chr5	+	377	5	ISM	ENSMUSG00000033773.15	ENST00000610020.2	1594	9	17154	69	17154	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTGACAGAATTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	107768550	107803091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_107768622_107771579_107771663_107773753_107773839_107780928_107780998_107803022
ENSMUSG00000033773.15_107768592_107803160_1	chr5	+	405	5	ISM	ENSMUSG00000033773.15	ENST00000610020.2	1594	9	17195	0	17195	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGCTAACAAGAATGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	107768591	107803160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_107768622_107771579_107771663_107773753_107773839_107780928_107780998_107803022
ENSMUSG00000033781.8_3694915_3702864_1	chr13	+	3013	3	ISM	ENSMUSG00000033781.8	ENSMUST00000042288.8	4453	6	10883	958	10883	-958	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACTGCATGCATGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	3694914	3702864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_3695051_3699318_3699511_3700179
ENSMUSG00000033781.8_3699379_3702992_1	chr13	+	2945	2	ISM	ENSMUSG00000033781.8	ENSMUST00000042288.8	4453	6	15347	830	15347	-830	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACACACATACACCACTC	NA	NA	NA	NA	NA	NA	NA	NA	3699378	3702992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_3699511_3700179
ENSMUSG00000033793.13_5153387_5159289_1	chr1	+	320	3	ISM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	10	73353	10	-73274	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCCGAGGACAAGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	5153386	5159289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_5153502_5154639_5154787_5159231
ENSMUSG00000033793.13_5159278_5168294_1	chr1	+	304	4	ISM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	5901	64348	5901	-64269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGAAGGCAGTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	5159277	5168294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_5159335_5163585_5163676_5165837_5165952_5168251
ENSMUSG00000033793.13_5168288_5194576_1	chr1	+	298	4	ISM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	14985	38176	14911	-37987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCCTCAAATGTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	5168287	5194576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_5168357_5171292_5171347_5187612_5187711_5194499
ENSMUSG00000033793.13_5168341_5194632_1	chr1	+	301	4	ISM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	15038	38120	14964	-37931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCCTTCAAGAATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	5168340	5194632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_5168357_5171292_5171347_5187612_5187711_5194499
ENSMUSG00000033793.13_5187648_5203364_1	chr1	+	314	3	ISM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	34271	29278	34271	-29199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAATGCAAAGTACTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	5187647	5203364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_5187711_5194499_5194693_5203306
ENSMUSG00000033793.13_5194627_5206078_1	chr1	+	289	3	ISM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	41250	26564	41250	-26485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAGCCCTGTACACAAG	NA	NA	NA	NA	NA	NA	NA	NA	5194626	5206078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_5194693_5203306_5203486_5206034
ENSMUSG00000033793.13_5203372_5214038_1	chr1	+	306	3	ISM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	49995	18604	49995	-18525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAATATGTCCGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	5203371	5214038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_5203486_5206034_5206161_5213972
ENSMUSG00000033793.13_5203452_5220215_1	chr1	+	307	4	ISM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	50075	12427	50075	-12348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCATGAAGACCAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	5203451	5220215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_5203486_5206034_5206161_5213972_5214075_5220170
ENSMUSG00000033793.13_5206123_5232367_1	chr1	+	294	4	ISM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	52746	275	52746	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGCTGCTCGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	5206122	5232367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_5206161_5213972_5214075_5220170_5220285_5232327
ENSMUSG00000033809.16_20424269_20427799_1	chr16	-	1120	8	ISM	ENSMUSG00000033809.16	ENSMUST00000045918.15	1451	9	1719	68	1719	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGGAACGGACTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	20427799	20424268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20427736
ENSMUSG00000033809.16_20424391_20429481_1	chr16	-	1224	9	FSM	ENSMUSG00000033809.16	ENSMUST00000045918.15	1451	9	37	190	37	-122	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCACGCTGTCGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	20429481	20424390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20427736_20427837_20429292
ENSMUSG00000033813.16_4928037_4967076_1	chr1	+	1495	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	0	1052	0	-1052	multi-exon	TRUE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTCGGATCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	4928036	4967076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUSG00000033813.16_4928037_4967109_1	chr1	+	1528	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	0	1019	0	-1019	multi-exon	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGACTAACCACAGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	4928036	4967109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUSG00000033813.16_4928037_4967125_1	chr1	+	1544	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	0	1003	0	-1003	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCATTTCTTTTATTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	4928036	4967125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUSG00000033813.16_4928150_4967187_1	chr1	+	1490	10	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	38	-941	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGACTTGGTTTATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	4928149	4967187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961029_4962149_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUSG00000033813.16_4928154_4967176_1	chr1	+	1478	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	117	952	42	-952	multi-exon	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTCTGAAAACGGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	4928153	4967176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUSG00000033813.16_4928154_4967184_1	chr1	+	1486	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	117	944	42	-944	multi-exon	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGGACTTGGTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	4928153	4967184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUSG00000033813.16_4928174_4962166_1	chr1	+	452	6	ISM	ENSMUSG00000033813.16	ENST00000640041.1	864	8	62	3067	62	-3067	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAAATACAAAAACAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	4928173	4962166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_4928200_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137
ENSMUSG00000033813.16_4948325_4967360_1	chr1	+	1478	8	ISM	ENSMUSG00000033813.16	ENSMUST00000165720.3	2854	10	20064	772	20064	-768	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGACTGTACTTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	4948324	4967360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUSG00000033813.16_4956956_4967450_1	chr1	+	1548	7	ISM	ENSMUSG00000033813.16	ENSMUST00000165720.3	2854	10	28695	682	28695	-678	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGTTGCAAAAAAAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	4956955	4967450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUSG00000033813.16_4959731_4967645_1	chr1	+	1593	6	ISM	ENSMUSG00000033813.16	ENSMUST00000165720.3	2854	10	31470	487	31470	-483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACACAGATGTTGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	4959730	4967645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUSG00000033813.16_4962211_4967775_1	chr1	+	1498	4	ISM	ENSMUSG00000033813.16	ENSMUST00000165720.3	2854	10	33950	357	33950	-353	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGTCATAACATGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	4962210	4967775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUSG00000033813.16_4963680_4967868_1	chr1	+	1469	3	ISM	ENSMUSG00000033813.16	ENSMUST00000165720.3	2854	10	35419	264	35419	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGCAGGCGGATTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	4963679	4967868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_4963787_4965156_4965229_4966578
ENSMUSG00000033813.16_4965172_4967990_1	chr1	+	1469	2	ISM	ENSMUSG00000033813.16	ENSMUST00000165720.3	2854	10	36911	142	36911	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGGATAATTTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	4965171	4967990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_4965229_4966578
ENSMUSG00000033819.17_76575175_76577549_1	chr15	+	747	6	ISM	ENSMUSG00000033819.17	ENSMUST00000135388.3	2827	12	19328	1570	19328	-1570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGAGTGTGCACAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	76575174	76577549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426
ENSMUSG00000033819.17_76575256_76577549_1	chr15	+	666	6	ISM	ENSMUSG00000033819.17	ENSMUST00000135388.3	2827	12	19409	1570	19409	-1570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGAGTGTGCACAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	76575255	76577549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426
ENSMUSG00000033819.17_76576096_76578129_1	chr15	+	728	7	ISM	ENSMUSG00000033819.17	ENSMUST00000135388.3	2827	12	20249	990	20249	-990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGCCATTGTGTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	76576095	76578129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067
ENSMUSG00000033819.17_76577251_76578641_1	chr15	+	727	6	ISM	ENSMUSG00000033819.17	ENSMUST00000135388.3	2827	12	21404	478	21404	-478	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGGCCCACCACACACT	NA	NA	NA	NA	NA	NA	NA	NA	76577250	76578641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ENSMUSG00000033845.14_4843570_4847783_1	chr1	-	1206	2	ISM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	8150	141	8150	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTTAGCAGGAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	4847783	4843569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4844740_4847747
ENSMUSG00000033845.14_4843629_4847834_1	chr1	-	1198	2	ISM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	8099	200	8099	-195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGTAAAGCACTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	4847834	4843628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4844740_4847747
ENSMUSG00000033845.14_4843700_4847872_1	chr1	-	1165	2	ISM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	8061	271	8061	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCTTCTGATCCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	4847872	4843699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4844740_4847747
ENSMUSG00000033845.14_4843887_4854237_1	chr1	-	1207	4	ISM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	1696	458	1696	-453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTAATCATTAAGAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	4854237	4843886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4844740_4847747_4847872_4852790_4852957_4854173
ENSMUSG00000033845.14_4844017_4855915_1	chr1	-	1288	5	FSM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	18	588	18	-583	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCATGTAGAGACCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	4855915	4844016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_4844740_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ENSMUSG00000033845.14_4844069_4855915_1	chr1	-	1236	5	FSM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	18	640	18	-635	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTGTTCATCAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	4855915	4844068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_4844740_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ENSMUSG00000033845.14_4844659_4847873_1	chr1	-	2492	2	ISM	ENSMUSG00000033845.14	ENSMUST00000156816.7	4203	5	8089	1225	8060	-1225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACATCTGACCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	4847873	4844658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4847025_4847747
ENSMUSG00000033845.14_4844841_4852857_1	chr1	-	2375	3	ISM	ENSMUSG00000033845.14	ENSMUST00000156816.7	4203	5	3105	1407	3076	-1407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTTGGGCATCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	4852857	4844840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4847025_4847747_4847872_4852790
ENSMUSG00000033845.14_4844890_4852916_1	chr1	-	2385	3	ISM	ENSMUSG00000033845.14	ENSMUST00000156816.7	4203	5	3046	1456	3017	-1456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGCAAAGGGTTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	4852916	4844889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4847025_4847747_4847872_4852790
ENSMUSG00000033845.14_4844952_4852956_1	chr1	-	2363	3	ISM	ENSMUSG00000033845.14	ENSMUST00000156816.7	4203	5	3006	1518	2977	-1518	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAGACCCTGTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	4852956	4844951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_4847025_4847747_4847872_4852790
ENSMUSG00000033845.14_4845126_4855915_1	chr1	-	2464	5	FSM	ENSMUSG00000033845.14	ENSMUST00000156816.7	4203	5	47	1692	18	-1692	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGCCTTGCCTCGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	4855915	4845125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ENSMUSG00000033852.17_119868264_119871939_1	chr2	+	1410	10	ISM	ENSMUSG00000098488.8	ENST00000452633.5	2238	15	2865	137	2865	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACCACTACACAAAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	119868263	119871939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871126_119871601_119871789_119871875
ENSMUSG00000033852.17_119870376_119871946_1	chr2	+	486	4	ISM	ENSMUSG00000033852.17	ENST00000342159.6	2749	20	9826	130	9826	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACACAAAAGTGACCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	119870375	119871946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119870444_119870623_119870804_119870958_119871126_119871875
ENSMUSG00000033857.13_118369732_118377346_1	chr11	+	1498	11	ISM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	2077	2689	13	-968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCAGCAGCTCAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	118369731	118377346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273
ENSMUSG00000033857.13_118369907_118377762_1	chr11	+	1603	11	ISM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	2252	2273	188	-552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTATGTGGGAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	118369906	118377762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647
ENSMUSG00000033857.13_118369999_118377739_1	chr11	+	1486	11	NNC	ENSMUSG00000033857.13	novel	2060	13	NA	NA	280	-575	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCGCCTTGGAGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	118369998	118377739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376136_118376582_118376732_118377270_118377380_118377647
ENSMUSG00000033857.13_118370054_118377962_1	chr11	+	1502	12	ISM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	2399	2073	335	-352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCACCATTTCTCAGATA	NA	NA	NA	NA	NA	NA	NA	NA	118370053	118377962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
ENSMUSG00000033857.13_118370075_118378065_1	chr11	+	1584	12	ISM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	2420	1970	356	-249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGAGCCCGCTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	118370074	118378065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
ENSMUSG00000033857.13_118372757_118378335_1	chr11	+	1609	10	ISM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	5102	1700	3038	21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTCCAGAGCACAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	118372756	118378335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
ENSMUSG00000033860.14_82917424_82917856_1	chr3	+	196	2	ISM	ENSMUSG00000033860.14	ENST00000405164.5	1104	6	52	4468	52	-4156	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCGACGGATCTGGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	82917423	82917856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_82917502_82917738
ENSMUSG00000033860.14_82917739_82918678_1	chr3	+	185	2	ISM	ENSMUSG00000033860.14	ENST00000405164.5	1104	6	367	3646	367	-3334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACTGGATTCAGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	82917738	82918678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_82917897_82918651
ENSMUSG00000033860.14_82917788_82918731_1	chr3	+	189	2	ISM	ENSMUSG00000033860.14	ENST00000405164.5	1104	6	416	3593	416	-3281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGAGTTTTGGCTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	82917787	82918731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_82917897_82918651
ENSMUSG00000033860.14_82918752_82920187_1	chr3	+	202	2	ISM	ENSMUSG00000033860.14	ENST00000405164.5	1104	6	1380	2137	1380	-1825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCCAGTGACAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	82918751	82920187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_82918837_82920070
ENSMUSG00000033860.14_82918806_82920253_1	chr3	+	214	2	ISM	ENSMUSG00000033860.14	ENST00000405164.5	1104	6	1434	2071	1434	-1759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATAAGTTTGAAGGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	82918805	82920253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_82918837_82920070
ENSMUSG00000033860.14_82920276_82921568_1	chr3	+	197	2	ISM	ENSMUSG00000033860.14	ENST00000405164.5	1104	6	2904	756	2904	-444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATCGGAGAAGGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	82920275	82921568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_82920349_82921444
ENSMUSG00000033860.14_82921446_82922170_1	chr3	+	198	2	ISM	ENSMUSG00000033860.14	ENST00000405164.5	1104	6	4074	154	4074	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTGCTTTTTTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	82921445	82922170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_82921615_82922141
ENSMUSG00000033863.3_23118746_23145498_1	chr19	+	4330	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	156	0	156	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCATTACGTTCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	23118745	23145498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_23119624_23142046
ENSMUSG00000033880.12_118284079_118288977_1	chr11	-	901	2	ISM	ENSMUSG00000033880.12	ENST00000591778.5	1406	3	412	220	412	-220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGCTACTCCAATCCGA	NA	NA	NA	NA	NA	NA	NA	NA	118288977	118284078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_118284949_118288946
ENSMUSG00000033880.12_118284206_118289232_1	chr11	-	902	3	FSM	ENSMUSG00000033880.12	ENST00000591778.5	1406	3	157	347	157	-347	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAGCTTCCTCTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	118289232	118284205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_118284949_118288946_118289079_118289205
ENSMUSG00000033880.12_118284264_118289281_1	chr11	-	893	3	FSM	ENSMUSG00000033880.12	ENST00000591778.5	1406	3	108	405	108	-405	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTATGGCTCAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	118289281	118284263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_118284949_118288946_118289079_118289205
ENSMUSG00000033880.12_118284335_118289346_1	chr11	-	887	3	FSM	ENSMUSG00000033880.12	ENST00000591778.5	1406	3	43	476	43	-476	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTTGGTGATGGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	118289346	118284334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_118284949_118288946_118289079_118289205
ENSMUSG00000033885.16_14305708_14325139_1	chr14	-	567	7	ISM	ENSMUSG00000033885.16	ENST00000302779.9	1794	17	46426	96	46379	-96	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCTTGCTCAGTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	14325139	14305707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14305827_14317615_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061
ENSMUSG00000033885.16_14305764_14325580_1	chr14	-	596	8	ISM	ENSMUSG00000033885.16	ENST00000302779.9	1794	17	45985	152	45938	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACGGAGATGCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	14325580	14305763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14305827_14317615_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535
ENSMUSG00000033885.16_14309675_14325179_1	chr14	-	644	8	ISM	ENSMUSG00000033885.16	ENST00000383715.8	1659	17	46363	-2	46339	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGTGTCCCTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	14325179	14309674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14309775_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061
ENSMUSG00000033885.16_14309758_14325596_1	chr14	-	622	9	ISM	ENSMUSG00000033885.16	ENST00000383715.8	1659	17	45946	81	45922	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACGTGAATTTTCGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	14325596	14309757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_14309775_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535
ENSMUSG00000033902.13_119803536_119841515_1	chr2	+	210	3	FSM	ENSMUSG00000033902.13	ENST00000627631.1	210	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAAGTACTTGGTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	119803535	119841515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_119803650_119841223_119841287_119841482
ENSMUSG00000033916.6_12765976_12766691_1	chr7	-	470	4	ISM	ENSMUSG00000033916.6	ENSMUST00000210587.2	930	6	1887	39	1880	26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCCCCCTGTAATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	12766691	12765975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568
ENSMUSG00000033916.6_12766096_12767865_1	chr7	-	517	5	ISM	ENSMUSG00000033916.6	ENSMUST00000210587.2	930	6	713	159	706	-94	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGGTGGGAAGAAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	12767865	12766095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755
ENSMUSG00000033916.6_12766415_12768608_1	chr7	-	497	4	ISM	ENSMUSG00000033916.6	ENST00000312547.7	817	6	77	413	-30	-413	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATGACGCAATTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	12768608	12766414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_12766493_12766568_12766749_12767755_12767948_12768561
ENSMUSG00000033916.6_12767848_12768612_1	chr7	-	173	2	ISM	ENSMUSG00000033916.6	ENSMUST00000211344.2	606	5	-41	1907	-34	-1846	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAGAACTGGACAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	12768612	12767847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_12767970_12768561
ENSMUSG00000033916.6_12767901_12768666_1	chr7	-	174	2	ISM	ENSMUSG00000033916.6	ENSMUST00000211626.2	726	6	0	1955	0	-1899	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACGCCAGAGGAACTAC	NA	NA	NA	NA	NA	NA	NA	NA	12768666	12767900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_12767970_12768561
ENSMUSG00000033916.6_12767950_12768734_1	chr7	-	193	2	ISM	ENSMUSG00000033916.6	ENSMUST00000005711.6	949	6	0	2009	0	-1948	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGCTGGTGGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	12768734	12767949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_12767970_12768561
ENSMUSG00000033917.16_118287768_118293808_1	chr7	-	911	3	ISM	ENSMUSG00000033917.16	ENSMUST00000038791.15	1582	6	11193	0	11193	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTACTGATCTTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	118293808	118287767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_118288374_118290805_118291018_118293715
ENSMUSG00000033917.16_118287896_118294321_1	chr7	-	846	4	ISM	ENSMUSG00000033917.16	ENSMUST00000038791.15	1582	6	10680	128	10680	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCTTGCCGTACTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	118294321	118287895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258
ENSMUSG00000033917.16_118288122_118297953_1	chr7	-	839	5	ISM	ENSMUSG00000033917.16	ENSMUST00000038791.15	1582	6	7048	354	7048	-354	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATAGTCACAGTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	118297953	118288121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118294365_118297777
ENSMUSG00000033917.16_118288229_118304714_1	chr7	-	829	6	NNC	ENSMUSG00000033917.16	novel	1582	6	NA	NA	287	-461	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACTCCCCAGGAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	118304714	118288228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_118288374_118290805_118291013_118293715_118293809_118294258_118294365_118297777_118297954_118304612
ENSMUSG00000033917.16_118288334_118304866_1	chr7	-	881	6	FSM	ENSMUSG00000033917.16	ENSMUST00000038791.15	1582	6	135	566	135	-566	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTGGACTGTCAATAC	NA	NA	NA	NA	NA	NA	NA	NA	118304866	118288333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118294365_118297777_118297954_118304612
ENSMUSG00000033918.17_20098570_20101570_1	chr16	-	364	2	ISM	ENSMUSG00000033918.17	ENSMUST00000152887.3	1355	10	18993	2	18993	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	20101570	20098569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_20098836_20101472
ENSMUSG00000033918.17_20104561_20116391_1	chr16	-	369	5	ISM	ENSMUSG00000033918.17	ENSMUST00000152887.3	1355	10	4172	5993	4172	-5991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTAAAGTTGCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	20116391	20104560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_20104586_20105669_20105820_20106606_20106703_20112103_20112153_20116342
ENSMUSG00000033933.14_113600920_113607904_1	chr6	+	2102	3	FSM	ENSMUSG00000033933.14	ENSMUST00000035673.8	2792	3	0	690	0	-690	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGCTTGCTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	113600919	113607904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_113601340_113605052_113605176_113606345
ENSMUSG00000033933.14_113601292_113608270_1	chr6	+	2096	3	FSM	ENSMUSG00000033933.14	ENSMUST00000035673.8	2792	3	372	324	372	-324	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTTCTTATCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	113601291	113608270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_113601340_113605052_113605176_113606345
ENSMUSG00000033940.9_113581733_113593302_1	chr6	+	485	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	0	610	0	-610	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTACTTGTCAATGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	113581732	113593302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_113581858_113592736_113592820_113593025
ENSMUSG00000033943.16_119733447_119754566_1	chr2	+	2781	7	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	5738	43664	5738	-43662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAATATTGCTATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	119733446	119754566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908
ENSMUSG00000033943.16_119733741_119757172_1	chr2	+	2801	8	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	6032	41058	6032	-41056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAGAAGAGAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	119733740	119757172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859
ENSMUSG00000033943.16_119746983_119763613_1	chr2	+	2750	10	ISM	ENSMUSG00000033943.16	ENSMUST00000079934.12	13304	23	19274	36449	19274	-34615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCACAAGGTCAGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	119746982	119763613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762413_119762984_119763168_119763553
ENSMUSG00000033943.16_119747425_119766063_1	chr2	+	2752	11	ISM	ENSMUSG00000033943.16	ENSMUST00000079934.12	13304	23	19716	33999	19716	-32165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTATGCAGGGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	119747424	119766063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762413_119762984_119763168_119763553_119763624_119765629
ENSMUSG00000033943.16_119747633_119769259_1	chr2	+	2768	12	ISM	ENSMUSG00000033943.16	ENSMUST00000079934.12	13304	23	19924	30803	19924	-28969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATTGGTAAGTAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	119747632	119769259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762413_119762984_119763168_119763553_119763624_119765629_119766148_119769119
ENSMUSG00000033943.16_119747749_119771781_1	chr2	+	2742	13	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	20040	26449	20040	-26447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCGCACACCTCAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	119747748	119771781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702
ENSMUSG00000033943.16_119750133_119772022_1	chr2	+	2851	12	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	22424	26208	22424	-26206	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTGAGATCTCTGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	119750132	119772022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702
ENSMUSG00000033943.16_119752261_119772234_1	chr2	+	2740	9	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	24552	25996	24552	-25994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTGGTGACCACACCTA	NA	NA	NA	NA	NA	NA	NA	NA	119752260	119772234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702
ENSMUSG00000033943.16_119754054_119776767_1	chr2	+	2739	9	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	26345	21463	26345	-21461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCAAAACCCACAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	119754053	119776767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652
ENSMUSG00000033943.16_119754355_119777476_1	chr2	+	2785	10	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	26654	20752	26646	-20752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCTCTCAGGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	119754354	119777476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305
ENSMUSG00000033943.16_119754472_119777559_1	chr2	+	2751	10	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	26771	20669	26763	-20669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAAATAACACCCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	119754471	119777559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305
ENSMUSG00000033943.16_119756899_119777694_1	chr2	+	2751	9	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	29198	20534	29190	-20534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCCTTCAAATAAAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	119756898	119777694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305
ENSMUSG00000033943.16_119756959_119777738_1	chr2	+	2735	9	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	29258	20490	29250	-20490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAACAAACTCTATCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	119756958	119777738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305
ENSMUSG00000033943.16_119757132_119777916_1	chr2	+	2740	9	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	29431	20312	29423	-20312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATGCCAGACCTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	119757131	119777916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305
ENSMUSG00000033943.16_119762260_119778062_1	chr2	+	2747	8	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	34559	20166	34551	-20166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGATATTATGGCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	119762259	119778062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305
ENSMUSG00000033943.16_119762343_119778162_1	chr2	+	2764	8	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	34642	20066	34634	-20066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGACTTTCTAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	119762342	119778162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305
ENSMUSG00000033943.16_119763068_119778329_1	chr2	+	2775	7	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	35367	19899	35359	-19899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCAGAAGTACATTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	119763067	119778329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305
ENSMUSG00000033943.16_119765669_119778581_1	chr2	+	2818	5	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	37968	19647	37960	-19647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCATTTACTGCTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	119765668	119778581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305
ENSMUSG00000033943.16_119769118_119788713_1	chr2	+	2790	7	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	41417	9515	41409	-9515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACCGACGGACACACACT	NA	NA	NA	NA	NA	NA	NA	NA	119769117	119788713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637
ENSMUSG00000033943.16_119769194_119788739_1	chr2	+	2740	7	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	41493	9489	41485	-9489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGGCGTCGGCGTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	119769193	119788739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637
ENSMUSG00000033943.16_119771732_119790902_1	chr2	+	2824	7	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	44031	7326	44023	-7326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATACGGAAGGTATCG	NA	NA	NA	NA	NA	NA	NA	NA	119771731	119790902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820
ENSMUSG00000033943.16_119771878_119791275_1	chr2	+	2777	8	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	44177	6953	44169	-6953	internal_fragment	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAAGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	119771877	119791275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206
ENSMUSG00000033943.16_119771951_119791306_1	chr2	+	2735	8	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	44250	6922	44242	-6922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTGTGTCCCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	119771950	119791306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206
ENSMUSG00000033943.16_119772010_119791364_1	chr2	+	2734	8	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	44309	6864	44301	-6864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTGGACAGATGCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	119772009	119791364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206
ENSMUSG00000033943.16_119772236_119792451_1	chr2	+	2761	9	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	44535	5777	44527	-5777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGGTGGTATTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	119772235	119792451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274
ENSMUSG00000033943.16_119776725_119794306_1	chr2	+	2732	9	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	49024	3922	49016	-3922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTGCTGGGAGTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	119776724	119794306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ENSMUSG00000033943.16_119776787_119794379_1	chr2	+	2743	9	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	49078	3851	49078	-3849	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAAAGGCACTGGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	119776786	119794379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ENSMUSG00000033943.16_119778172_119795395_1	chr2	+	2736	8	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	50463	2835	50463	-2833	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTAAATTGGGCAACTC	NA	NA	NA	NA	NA	NA	NA	NA	119778171	119795395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ENSMUSG00000033943.16_119778510_119795842_1	chr2	+	2845	8	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	50801	2388	50801	-2386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGGAAAAAAAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	119778509	119795842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ENSMUSG00000033943.16_119778563_119795866_1	chr2	+	2816	8	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	50854	2364	50854	-2362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTACTATTTCAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	119778562	119795866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ENSMUSG00000033943.16_119781600_119796216_1	chr2	+	2758	8	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	53899	2012	53891	-2012	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTATTTTCAGAGACTA	NA	NA	NA	NA	NA	NA	NA	NA	119781599	119796216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172_119795895_119796057
ENSMUSG00000033943.16_119788795_119796468_1	chr2	+	2706	6	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	61094	1760	61086	-1760	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGAAGGTTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	119788794	119796468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172_119795895_119796057
ENSMUSG00000033943.16_119791327_119796801_1	chr2	+	2757	4	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	63626	1427	63618	-1427	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTCTCGGGAACTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	119791326	119796801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119791441_119792274_119792452_119794172_119795895_119796057
ENSMUSG00000033943.16_119792330_119796973_1	chr2	+	2760	3	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	64629	1255	64621	-1255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCTGGGCTGTGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	119792329	119796973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119792452_119794172_119795895_119796057
ENSMUSG00000033943.16_119792373_119797049_1	chr2	+	2793	3	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	64672	1179	64664	-1179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCTAGGTTGTGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	119792372	119797049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119792452_119794172_119795895_119796057
ENSMUSG00000033943.16_119795157_119798065_1	chr2	+	2746	2	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	67456	163	67448	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATATAATTATGTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	119795156	119798065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119795895_119796057
ENSMUSG00000033943.16_119795226_119798230_1	chr2	+	2842	2	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	67525	-2	67517	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTGGGAGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	119795225	119798230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119795895_119796057
ENSMUSG00000033943.16_119795295_119798230_1	chr2	+	2773	2	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	67594	-2	67586	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTGGGAGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	119795294	119798230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119795895_119796057
ENSMUSG00000033952.15_139384880_139390857_1	chr1	+	1619	4	ISM	ENSMUSG00000033952.15	ENST00000680265.1	8568	27	405	30741	405	-30741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAAAGAGGAAGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	139384879	139390857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_139386183_139389163_139389269_139389509_139389657_139390793
ENSMUSG00000033952.15_139385633_139421692_1	chr1	+	4503	25	ISM	ENSMUSG00000033952.15	ENSMUST00000200083.5	6072	27	3123	134	1158	94	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATTTTTTTTCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	139385632	139421692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_139386183_139389163_139389269_139389509_139389657_139390793_139391040_139391973_139392042_139395655_139395798_139396355_139396487_139397073_139397250_139398175_139398322_139398409_139398496_139399308_139399531_139401275_139401484_139401575_139401719_139401982_139402112_139404445_139404641_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
ENSMUSG00000033952.15_139399432_139405938_1	chr1	+	1629	6	ISM	ENSMUSG00000033952.15	ENST00000680265.1	8568	27	14957	15660	14957	-15660	internal_fragment	TRUE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCATGTAGAGGGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	139399431	139405938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_139399531_139401275_139401484_139401575_139401719_139401982_139402112_139404445_139404641_139405083
ENSMUSG00000033952.15_139401309_139406077_1	chr1	+	1636	5	ISM	ENSMUSG00000033952.15	ENST00000680265.1	8568	27	16834	15521	16834	-15521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATTGTCAAAATGAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	139401308	139406077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_139401484_139401575_139401719_139401982_139402112_139404445_139404641_139405083
ENSMUSG00000033952.15_139401430_139406192_1	chr1	+	1630	5	ISM	ENSMUSG00000033952.15	ENST00000680265.1	8568	27	16955	15406	16955	-15406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACAGGTGCGTGAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	139401429	139406192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_139401484_139401575_139401719_139401982_139402112_139404445_139404641_139405083
ENSMUSG00000033952.15_139404560_139406634_1	chr1	+	1632	2	ISM	ENSMUSG00000033952.15	ENST00000680265.1	8568	27	20085	14964	20085	-14964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTAGAGAGGCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	139404559	139406634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_139404641_139405083
ENSMUSG00000033952.15_139407562_139417837_1	chr1	+	1619	7	ISM	ENSMUSG00000033952.15	ENST00000680265.1	8568	27	23087	3761	23087	-3761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACCTGCTCACCTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	139407561	139417837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_139408238_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701
ENSMUSG00000033952.15_139407617_139417894_1	chr1	+	1621	7	ISM	ENSMUSG00000033952.15	ENST00000680265.1	8568	27	23142	3704	23142	-3704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTGTCCTCTAAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	139407616	139417894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_139408238_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701
ENSMUSG00000033952.15_139410155_139421583_1	chr1	+	1621	10	ISM	ENSMUSG00000033952.15	ENST00000680265.1	8568	27	25680	15	25680	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTTTGTGTAAAAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	139410154	139421583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
ENSMUSG00000033953.11_17109263_17150264_1	chr11	+	2748	6	FSM	ENSMUSG00000033953.11	ENSMUST00000102880.5	2859	6	0	111	0	-111	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTATGTTGAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	17109262	17150264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_17109543_17132106_17132147_17142956_17143134_17144216_17144277_17144668_17144854_17148258
ENSMUSG00000033953.11_17109404_17150375_1	chr11	+	2718	6	FSM	ENSMUSG00000033953.11	ENSMUST00000102880.5	2859	6	141	0	89	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAATGTATTGTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	17109403	17150375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_17109543_17132106_17132147_17142956_17143134_17144216_17144277_17144668_17144854_17148258
ENSMUSG00000033970.16_151566289_151571730_1	chr5	-	887	7	ISM	ENSMUSG00000033970.16	ENSMUST00000038131.10	1317	9	2977	68	2977	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTATCATTTGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	151571730	151566288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_151566569_151567175_151567246_151568077_151568177_151568254_151568392_151568982_151569165_151570903_151571002_151571709
ENSMUSG00000033970.16_151566289_151571766_1	chr5	-	923	7	ISM	ENSMUSG00000033970.16	ENSMUST00000038131.10	1317	9	2941	68	2941	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTATCATTTGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	151571766	151566288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_151566569_151567175_151567246_151568077_151568177_151568254_151568392_151568982_151569165_151570903_151571002_151571709
ENSMUSG00000033970.16_151566434_151573382_1	chr5	-	835	8	ISM	ENSMUSG00000033970.16	ENSMUST00000038131.10	1317	9	1325	213	1325	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGGCACTTTATAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	151573382	151566433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_151566569_151567175_151567246_151568077_151568177_151568254_151568392_151568982_151569165_151570903_151571002_151571709_151571778_151573336
ENSMUSG00000033970.16_151566483_151573435_1	chr5	-	839	8	ISM	ENSMUSG00000033970.16	ENSMUST00000038131.10	1317	9	1272	262	1272	-262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCTGGGCAGCAAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	151573435	151566482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_151566569_151567175_151567246_151568077_151568177_151568254_151568392_151568982_151569165_151570903_151571002_151571709_151571778_151573336
ENSMUSG00000033970.16_151567175_151574660_1	chr5	-	923	8	ISM	ENSMUSG00000033970.16	ENSMUST00000038131.10	1317	9	47	954	47	-954	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGCTCCATTGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	151574660	151567174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_151567246_151568077_151568177_151568254_151568392_151568982_151569165_151570903_151571002_151571709_151571778_151573336_151573475_151574530
ENSMUSG00000033972.10_22557966_22560043_1	chr17	-	1219	2	ISM	ENSMUSG00000033972.10	ENSMUST00000115535.3	2784	6	20338	996	20338	-996	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCATACAGGACAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	22560043	22557965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_22559089_22559947
ENSMUSG00000033972.10_22558258_22578484_1	chr17	-	1242	5	ISM	ENSMUSG00000033972.10	ENSMUST00000115535.3	2784	6	1897	1288	1897	-1288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTTCACTCACAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	22578484	22558257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577970_22578420
ENSMUSG00000033981.15_80595466_80710034_1	chr3	-	3440	16	FSM	ENSMUSG00000033981.15	ENST00000645636.1	3391	16	0	-49	0	49	multi-exon	TRUE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAGGTATTTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	80710034	80595465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_80596022_80596523_80596659_80598626_80598742_80599591_80599840_80609764_80609964_80614194_80614566_80615005_80615213_80616684_80616796_80617596_80617702_80617983_80618152_80629338_80629501_80634138_80634193_80639344_80639542_80648265_80648506_80708951_80709093_80709603
ENSMUSG00000033983.15_88872263_88882300_1	chr11	+	1832	6	ISM	ENSMUSG00000033983.15	ENSMUST00000036649.8	2607	7	7502	139	7502	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATTTCCTTTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	88872262	88882300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ENSMUSG00000033985.18_116578145_116658441_1	chr4	+	1098	7	ISM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	0	2998	0	-2858	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATTAGAGATTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	116578144	116658441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356
ENSMUSG00000033985.18_116598880_116659903_1	chr4	+	1121	10	ISM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	20735	1536	0	-1396	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTTTCTCATAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	116598879	116659903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
ENSMUSG00000033985.18_116649331_116660325_1	chr4	+	1090	7	ISM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	71186	1114	50451	-974	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCATGGACTGCTCTAACC	NA	NA	NA	NA	NA	NA	NA	NA	116649330	116660325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
ENSMUSG00000034006.18_80298460_80335462_1	chr18	+	1526	5	FSM	ENSMUSG00000034006.18	ENSMUST00000123750.8	2004	5	0	478	0	-390	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGCACCTGTGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	80298459	80335462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_80298626_80299996_80300334_80306634_80306769_80326490_80326708_80334790
ENSMUSG00000034006.18_80298605_80335534_1	chr18	+	1453	5	FSM	ENSMUSG00000034006.18	ENSMUST00000123750.8	2004	5	145	406	145	-318	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGAGATCATGTTACAC	NA	NA	NA	NA	NA	NA	NA	NA	80298604	80335534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_80298626_80299996_80300334_80306634_80306769_80326490_80326708_80334790
ENSMUSG00000034006.18_80300038_80335145_1	chr18	+	1002	4	ISM	ENSMUSG00000034006.18	ENSMUST00000070135.8	1911	5	505	782	505	-707	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCAGGTGGGGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	80300037	80335145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_80300334_80306634_80306769_80326490_80326708_80334790
ENSMUSG00000034006.18_80306634_80335940_1	chr18	+	1502	3	ISM	ENSMUSG00000034006.18	ENSMUST00000070135.8	1911	5	7101	-13	7101	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTGTAAGTAAGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	80306633	80335940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_80306769_80326490_80326708_80334790
ENSMUSG00000034009.15_79552020_79575160_1	chr3	-	1745	12	NNC	ENSMUSG00000034009.15	novel	2221	17	NA	NA	37847	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTAGTCTCAAGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	79575160	79552019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_79552325_79555379_79555599_79557720_79558132_79559474_79559705_79562910_79562985_79564718_79564791_79567377_79567450_79568574_79568647_79570604_79570676_79573735_79573811_79574929_79575002_79575088
ENSMUSG00000034009.15_79552020_79613019_1	chr3	-	2134	16	FSM	ENSMUSG00000034009.15	ENST00000470033.2	2115	16	-12	-7	-12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTAGTCTCAAGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	79613019	79552019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_79552325_79555379_79555599_79557720_79558132_79559474_79559705_79562910_79562985_79564718_79564791_79567377_79567450_79568574_79568647_79570603_79570676_79573735_79573811_79574929_79575002_79575088_79575161_79578153_79578226_79585982_79586055_79589747_79589854_79612881
ENSMUSG00000034009.15_79552158_79586035_1	chr3	-	1732	14	NNC	ENSMUSG00000034009.15	novel	2115	16	NA	NA	26972	-131	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCATCATTCATCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	79586035	79552157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_79552325_79555379_79555599_79557720_79558132_79559474_79559705_79562910_79562985_79564718_79564791_79567377_79567450_79568574_79568647_79570604_79570676_79573735_79573811_79574929_79575002_79575088_79575161_79578153_79578226_79585982
ENSMUSG00000034009.15_79552225_79589828_1	chr3	-	1766	15	ISM	ENSMUSG00000034009.15	ENST00000470033.2	2115	16	23179	198	23179	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCAACTCTGGCACAACT	NA	NA	NA	NA	NA	NA	NA	NA	79589828	79552224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79552325_79555379_79555599_79557720_79558132_79559474_79559705_79562910_79562985_79564718_79564791_79567377_79567450_79568574_79568647_79570603_79570676_79573735_79573811_79574929_79575002_79575088_79575161_79578153_79578226_79585982_79586055_79589747
ENSMUSG00000034009.15_79552306_79594149_1	chr3	-	1753	16	ISM	ENSMUSG00000034009.15	ENST00000460056.6	2221	17	18858	286	18858	-279	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATTTTTATTCTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	79594149	79552305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79552325_79555379_79555599_79557720_79558132_79559474_79559705_79562910_79562985_79564718_79564791_79567377_79567450_79568574_79568647_79570603_79570676_79573735_79573811_79574929_79575002_79575088_79575161_79578153_79578226_79585982_79586055_79589747_79589854_79594106
ENSMUSG00000034009.15_79555380_79594206_1	chr3	-	1790	15	NNC	ENSMUSG00000034009.15	novel	2221	17	NA	NA	18801	-3353	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAATCTTTCCCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	79594206	79555379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_79555599_79557720_79558132_79559474_79559705_79562910_79562985_79564718_79564791_79567377_79567450_79568574_79568647_79570603_79570676_79573735_79573811_79574929_79575002_79575088_79575161_79578153_79578226_79585982_79586055_79589748_79589854_79594106
ENSMUSG00000034009.15_79555380_79594206_2	chr3	-	1789	15	NNC	ENSMUSG00000034009.15	novel	2221	17	NA	NA	18801	-3353	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAATCTTTCCCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	79594206	79555379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_79555599_79557720_79558132_79559474_79559705_79562910_79562985_79564720_79564791_79567377_79567450_79568574_79568647_79570603_79570676_79573735_79573811_79574929_79575002_79575088_79575161_79578153_79578226_79585982_79586055_79589747_79589854_79594106
ENSMUSG00000034009.15_79555380_79594206_3	chr3	-	1790	15	NNC	ENSMUSG00000034009.15	novel	2221	17	NA	NA	18801	-3353	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAATCTTTCCCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	79594206	79555379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_79555599_79557720_79558132_79559474_79559705_79562910_79562985_79564718_79564791_79567377_79567450_79568574_79568647_79570604_79570676_79573735_79573811_79574929_79575002_79575088_79575161_79578153_79578226_79585982_79586055_79589747_79589854_79594106
ENSMUSG00000034009.15_79555380_79594206_4	chr3	-	1791	15	ISM	ENSMUSG00000034009.15	ENST00000460056.6	2221	17	18801	3360	18801	-3353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAATCTTTCCCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	79594206	79555379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79555599_79557720_79558132_79559474_79559705_79562910_79562985_79564718_79564791_79567377_79567450_79568574_79568647_79570603_79570676_79573735_79573811_79574929_79575002_79575088_79575161_79578153_79578226_79585982_79586055_79589747_79589854_79594106
ENSMUSG00000034009.15_79555481_79594206_1	chr3	-	1689	15	NNC	ENSMUSG00000034009.15	novel	2221	17	NA	NA	18801	-3454	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGCCAAACGCTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	79594206	79555480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_79555599_79557720_79558132_79559474_79559705_79562910_79562985_79564718_79564791_79567377_79567450_79568574_79568647_79570604_79570676_79573735_79573811_79574929_79575002_79575088_79575161_79578153_79578226_79585982_79586055_79589747_79589854_79594106
ENSMUSG00000034009.15_79555481_79594206_2	chr3	-	1689	15	NNC	ENSMUSG00000034009.15	novel	2221	17	NA	NA	18801	-3454	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGCCAAACGCTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	79594206	79555480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_79555599_79557720_79558132_79559474_79559705_79562910_79562985_79564718_79564791_79567377_79567450_79568574_79568647_79570603_79570676_79573735_79573811_79574929_79575002_79575088_79575161_79578153_79578226_79585982_79586055_79589748_79589854_79594106
ENSMUSG00000034009.15_79555481_79613019_2	chr3	-	1827	16	ISM	ENSMUSG00000034009.15	ENST00000460056.6	2221	17	-12	3461	-12	-3454	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGCCAAACGCTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	79613019	79555480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79555599_79557720_79558132_79559474_79559705_79562910_79562985_79564718_79564791_79567377_79567450_79568574_79568647_79570603_79570676_79573735_79573811_79574929_79575002_79575088_79575161_79578153_79578226_79585982_79586055_79589747_79589854_79594106_79594206_79612881
ENSMUSG00000034009.15_79555574_79645101_1	chr3	-	1783	17	ISM	ENSMUSG00000034009.15	ENST00000307765.10	2374	18	92	3554	0	-3547	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTTCTCCTATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	79645101	79555573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79555599_79557720_79558132_79559474_79559705_79562910_79562985_79564718_79564791_79567377_79567450_79568574_79568647_79570603_79570676_79573735_79573811_79574929_79575002_79575088_79575161_79578153_79578226_79585982_79586055_79589747_79589854_79594106_79594206_79612881_79613020_79645052
ENSMUSG00000034009.15_79557718_79645101_1	chr3	-	1761	16	ISM	ENSMUSG00000034009.15	ENST00000307765.10	2374	18	92	5698	0	-5691	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATCCTGCATTGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	79645101	79557717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79558132_79559474_79559705_79562910_79562985_79564718_79564791_79567377_79567450_79568574_79568647_79570603_79570676_79573735_79573811_79574929_79575002_79575088_79575161_79578153_79578226_79585982_79586055_79589747_79589854_79594106_79594206_79612881_79613020_79645052
ENSMUSG00000034024.9_116886906_116898042_1	chr10	-	1703	13	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	914	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	116898042	116886905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897309_116897409_116897487_116897929
ENSMUSG00000034024.9_116886906_116898787_1	chr10	-	1775	14	ISM	ENSMUSG00000034024.9	ENSMUST00000047672.9	1959	16	932	0	169	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	116898787	116886905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721
ENSMUSG00000034024.9_116886906_116898788_1	chr10	-	1775	14	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	168	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	4751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	116898788	116886905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891136_116891940_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721
ENSMUSG00000034024.9_116886906_116898788_2	chr10	-	1634	13	ISM	ENSMUSG00000034024.9	ENST00000544368.6	1657	14	168	-52	168	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	116898788	116886905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_116887182_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721
ENSMUSG00000034024.9_116887015_116898896_1	chr10	-	1681	15	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	60	-57	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACATGGGTCTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	116898896	116887014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891136_116891940_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880
ENSMUSG00000034024.9_116887021_116899668_1	chr10	-	1793	16	FSM	ENSMUSG00000034024.9	ENSMUST00000047672.9	1959	16	51	115	0	-63	multi-exon	FALSE	canonical	NA	NA	NA	NA	4445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTTAAACATGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	116899668	116887020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ENSMUSG00000034024.9_116887038_116898936_1	chr10	-	1557	14	FSM	ENSMUSG00000034024.9	ENST00000544368.6	1657	14	20	80	20	-80	multi-exon	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATTAGCTGACCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	116898936	116887037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_116887182_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880
ENSMUSG00000034024.9_116887082_116898938_1	chr10	-	1656	15	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	18	-124	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGACTGGTGGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	116898938	116887081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891136_116891940_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880
ENSMUSG00000034024.9_116887127_116899668_1	chr10	-	1687	16	FSM	ENSMUSG00000034024.9	ENSMUST00000047672.9	1959	16	51	221	0	-169	multi-exon	FALSE	canonical	NA	NA	NA	NA	2125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCAGTTCATAGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	116899668	116887126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ENSMUSG00000034024.9_116887148_116899668_1	chr10	-	1661	16	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	-190	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCATTTGCTGATGAACT	NA	NA	NA	NA	NA	NA	NA	NA	116899668	116887147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891136_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ENSMUSG00000034024.9_116888920_116899668_1	chr10	-	1632	15	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	-1962	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGAGTGCTCGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	116899668	116888919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_116889063_116889944_116890045_116890781_116890886_116891011_116891136_116891940_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ENSMUSG00000034057.9_116685000_116732681_1	chr10	-	492	4	ISM	ENSMUSG00000034057.9	ENST00000547771.6	3115	25	83	72607	83	-72560	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAACGGGGCCCTCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	116732681	116684999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_116685174_116685271_116685340_116697385_116697477_116732522
ENSMUSG00000034059.15_84567167_84568859_1	chr2	+	1116	4	ISM	ENSMUSG00000034059.15	ENSMUST00000238573.2	1585	5	2765	140	2765	-140	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGCCCTCTGGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	84567166	84568859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84567310_84567407_84567452_84567763_84567873_84568039
ENSMUSG00000034064.15_38346650_38347982_1	chr16	-	538	2	ISM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	22638	1151	22638	-1151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGCAGACCATCCATCG	NA	NA	NA	NA	NA	NA	NA	NA	38347982	38346649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38347144_38347938
ENSMUSG00000034064.15_38346754_38349871_1	chr16	-	512	3	ISM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	20749	1255	20749	-1255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCGTTTTCCTATGATCA	NA	NA	NA	NA	NA	NA	NA	NA	38349871	38346753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38347144_38347938_38347996_38349806
ENSMUSG00000034064.15_38346919_38355108_1	chr16	-	531	5	ISM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	15512	1420	15512	-1420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGTACCTTGAACACT	NA	NA	NA	NA	NA	NA	NA	NA	38355108	38346918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086
ENSMUSG00000034064.15_38347051_38363240_1	chr16	-	578	7	ISM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	7380	1552	7380	-1552	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATGTAACAAGAAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	38363240	38347050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199
ENSMUSG00000034064.15_38347132_38363270_1	chr16	-	527	7	ISM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	7350	1633	7350	-1633	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATAAACCATTTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	38363270	38347131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199
ENSMUSG00000034064.15_38349824_38366157_1	chr16	-	539	6	ISM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	4463	4325	4463	-4325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTCTCCAATGTCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	38366157	38349823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110
ENSMUSG00000034064.15_38352186_38368874_1	chr16	-	512	6	ISM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	1746	6687	1746	-6687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCTAAGGATGTACACCTC	NA	NA	NA	NA	NA	NA	NA	NA	38368874	38352185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799
ENSMUSG00000034064.15_38358268_38369795_1	chr16	-	554	5	ISM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	825	12769	825	-12769	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATATTCTTAGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	38369795	38358267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704
ENSMUSG00000034071.16_12149479_12150240_1	chr7	-	595	2	ISM	ENSMUSG00000034071.16	ENST00000610548.2	708	3	2345	-2	2345	2	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTGAATGTAGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	12150240	12149478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_12150058_12150224
ENSMUSG00000034071.16_12149479_12152550_1	chr7	-	671	2	NNC	ENSMUSG00000034071.16	novel	878	2	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTGAATGTAGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	12152550	12149478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_12150061_12152461
ENSMUSG00000034071.16_12149479_12152550_2	chr7	-	674	2	NNC	ENSMUSG00000034071.16	novel	878	2	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTGAATGTAGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	12152550	12149478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_12150072_12152469
ENSMUSG00000034071.16_12149479_12152550_3	chr7	-	673	2	NNC	ENSMUSG00000034071.16	novel	878	2	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTGAATGTAGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	12152550	12149478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_12150077_12152475
ENSMUSG00000034071.16_12149479_12152550_4	chr7	-	673	2	NNC	ENSMUSG00000034071.16	novel	878	2	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTGAATGTAGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	12152550	12149478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_12150072_12152470
ENSMUSG00000034075.11_84519341_84523704_1	chr2	-	1690	6	ISM	ENSMUSG00000034075.11	ENST00000527985.5	2789	11	22039	46	21820	-46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAGATCATTTTTAAACC	NA	NA	NA	NA	NA	NA	NA	NA	84523704	84519340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692
ENSMUSG00000034075.11_84519578_84524996_1	chr2	-	1719	8	ISM	ENSMUSG00000034075.11	ENST00000527985.5	2789	11	20747	283	20528	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCAGGTGGCCACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	84524996	84519577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913
ENSMUSG00000034075.11_84519655_84525025_1	chr2	-	1671	8	ISM	ENSMUSG00000034075.11	ENST00000527985.5	2789	11	20718	360	20499	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGCACCACTTATGAG	NA	NA	NA	NA	NA	NA	NA	NA	84525025	84519654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913
ENSMUSG00000034075.11_84520270_84532701_1	chr2	-	1705	9	ISM	ENSMUSG00000034075.11	ENST00000527985.5	2789	11	13042	975	12823	-975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTATAGCAGCCAAAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	84532701	84520269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676
ENSMUSG00000034075.11_84520337_84532744_1	chr2	-	1681	9	ISM	ENSMUSG00000034075.11	ENST00000527985.5	2789	11	12999	1042	12780	-1042	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGAAGCCGGGGACTAGG	NA	NA	NA	NA	NA	NA	NA	NA	84532744	84520336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676
ENSMUSG00000034075.11_84520481_84545524_1	chr2	-	1789	10	ISM	ENSMUSG00000034075.11	ENST00000527985.5	2789	11	219	1186	0	-1186	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGAGACTCAGGCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	84545524	84520480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84545326
ENSMUSG00000034075.11_84520603_84545527_1	chr2	-	1670	10	ISM	ENSMUSG00000034075.11	ENST00000527985.5	2789	11	216	1308	-3	-1308	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAGAACCCTCACCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	84545527	84520602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84545326
ENSMUSG00000034075.11_84520712_84545702_1	chr2	-	1736	10	ISM	ENSMUSG00000034075.11	ENST00000527985.5	2789	11	41	1417	41	-1417	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCCAGACCCACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	84545702	84520711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84545326
ENSMUSG00000034083.17_91855056_91876584_1	chr6	+	1251	9	NNC	ENSMUSG00000034083.17	novel	1190	9	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATTTGTCTCATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	91855055	91876584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865055_91865232_91867774_91867871_91869836_91869980_91875133_91875281_91876272
ENSMUSG00000034083.17_91855056_91876584_2	chr6	+	1250	9	NNC	ENSMUSG00000034083.17	novel	1190	9	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATTTGTCTCATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	91855055	91876584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91875139_91875281_91876272
ENSMUSG00000034083.17_91855056_91876584_3	chr6	+	1256	9	FSM	ENSMUSG00000034083.17	ENST00000303688.8	1190	9	-66	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATTTGTCTCATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	91855055	91876584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91875133_91875281_91876272
ENSMUSG00000034083.17_91855056_91876584_4	chr6	+	1259	9	NNC	ENSMUSG00000034083.17	novel	1190	9	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATTTGTCTCATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	91855055	91876584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91875130_91875281_91876272
ENSMUSG00000034083.17_91857237_91876584_1	chr6	+	1144	8	NNC	ENSMUSG00000034083.17	novel	1190	9	NA	NA	2115	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATTTGTCTCATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	91857236	91876584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91875133_91875281_91876273
ENSMUSG00000034088.16_93333662_93344947_1	chr1	-	3484	10	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	23567	-2062	23567	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATGGGACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	93344947	93333661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893
ENSMUSG00000034088.16_93333772_93345019_1	chr1	-	3446	10	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	23495	-1952	23495	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGCCTTAACTTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	93345019	93333771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893
ENSMUSG00000034088.16_93333930_93345248_1	chr1	-	3440	11	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	23266	-1794	23266	-268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTCTGATTGTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	93345248	93333929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189
ENSMUSG00000034088.16_93334050_93345367_1	chr1	-	3439	11	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	23147	-1674	23147	-388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCAGTCTCCCCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	93345367	93334049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189
ENSMUSG00000034088.16_93334162_93347864_1	chr1	-	3445	12	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	20650	-1562	20650	-500	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCCTGCCTTTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	93347864	93334161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790
ENSMUSG00000034088.16_93334227_93347925_1	chr1	-	3441	12	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	20589	-1497	20589	-565	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAACATCTACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	93347925	93334226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790
ENSMUSG00000034088.16_93334348_93348838_1	chr1	-	3437	13	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	19676	-1376	19676	-686	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTACCTGTAGACTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	93348838	93334347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805
ENSMUSG00000034088.16_93334391_93348901_1	chr1	-	3457	13	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	19613	-1333	19613	-729	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCCTCAAGTCTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	93348901	93334390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805
ENSMUSG00000034088.16_93334497_93349131_1	chr1	-	3454	14	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	19383	-1227	19383	-835	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAACTAGCAACATGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	93349131	93334496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064
ENSMUSG00000034088.16_93334700_93351565_1	chr1	-	3459	16	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	16949	-1024	16949	784	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCAGAATGAAAACAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	93351565	93334699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491
ENSMUSG00000034088.16_93334815_93353057_1	chr1	-	3444	17	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	15457	-909	15457	669	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCATGCAGGCTCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	93353057	93334814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988
ENSMUSG00000034088.16_93335033_93355946_1	chr1	-	3453	19	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	12568	-691	12568	451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGCCTCTGCCTGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	93355946	93335032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869
ENSMUSG00000034088.16_93335484_93357207_1	chr1	-	3138	20	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	11307	-240	11307	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	93357207	93335483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099
ENSMUSG00000034088.16_93335617_93358026_1	chr1	-	3212	21	ISM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	15382	133	10488	107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCTTCCTGGTCCACC	NA	NA	NA	NA	NA	NA	NA	NA	93358026	93335616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819
ENSMUSG00000034088.16_93335724_93358778_1	chr1	-	3207	22	ISM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	14630	240	9736	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGCACCCAGCAGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	93358778	93335723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676
ENSMUSG00000034088.16_93335724_93359240_1	chr1	-	3528	23	ISM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	14168	240	9274	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGCACCCAGCAGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	93359240	93335723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033
ENSMUSG00000034088.16_93335841_93364844_1	chr1	-	3440	24	ISM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	8564	357	3670	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCAATCTGACCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	93364844	93335840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815
ENSMUSG00000034088.16_93335898_93364898_1	chr1	-	3437	24	ISM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	8510	414	3616	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATGATCAAAAAGAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	93364898	93335897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815
ENSMUSG00000034088.16_93336179_93365975_1	chr1	-	3426	24	ISM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	7433	695	2539	-455	internal_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCCCCAGCACATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	93365975	93336178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947
ENSMUSG00000034088.16_93336670_93368514_1	chr1	-	3514	23	ISM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	4894	1186	0	-946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCCCAAAGCCAACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	93368514	93336669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401
ENSMUSG00000034088.16_93336798_93369958_1	chr1	-	3437	24	ISM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	3450	1314	-1444	-1074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAAAATTGTGGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	93369958	93336797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907
ENSMUSG00000034088.16_93341547_93373374_1	chr1	-	3186	22	ISM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	34	6063	34	-5823	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCATGTTCCCTGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	93373374	93341546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93373301
ENSMUSG00000034098.15_75981866_76389593_1	chr3	+	1221	7	ISM	ENSMUSG00000034098.15	ENSMUST00000038364.15	5107	16	289	227733	-8	-225891	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTGCTGTTCTGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	75981865	76389593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_75982282_76052255_76052398_76131147_76131182_76229360_76229610_76317744_76317942_76337048_76337170_76389531
ENSMUSG00000034098.15_75981866_76389657_1	chr3	+	1285	7	ISM	ENSMUSG00000034098.15	ENSMUST00000038364.15	5107	16	289	227669	-8	-225827	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACATTGTTCTAAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	75981865	76389657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_75982282_76052255_76052398_76131147_76131182_76229360_76229610_76317744_76317942_76337048_76337170_76389531
ENSMUSG00000034098.15_75982069_76443644_1	chr3	+	1196	7	NNC	ENSMUSG00000034098.15	novel	2938	15	NA	NA	195	-171840	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGACACACATCTTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	75982068	76443644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_75982282_76052255_76052411_76229360_76229610_76317744_76317942_76337048_76337170_76389531_76389699_76443550
ENSMUSG00000034098.15_75982104_76496296_1	chr3	+	1252	9	ISM	ENSMUSG00000034098.15	ENSMUST00000038364.15	5107	16	527	121030	230	-119188	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGTGTAACTGCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	75982103	76496296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_75982282_76052255_76052398_76131147_76131182_76229360_76229610_76317744_76317942_76337048_76337170_76389531_76389699_76443550_76443672_76496253
ENSMUSG00000034098.15_75982190_76496325_1	chr3	+	1195	9	ISM	ENSMUSG00000034098.15	ENSMUST00000038364.15	5107	16	613	121001	316	-119159	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCGAGGGCATTCCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	75982189	76496325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_75982282_76052255_76052398_76131147_76131182_76229360_76229610_76317744_76317942_76337048_76337170_76389531_76389699_76443550_76443672_76496253
ENSMUSG00000034098.15_75982237_76496388_1	chr3	+	1211	9	ISM	ENSMUSG00000034098.15	ENSMUST00000038364.15	5107	16	660	120938	363	-119096	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCTCCAAACAGCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	75982236	76496388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_75982282_76052255_76052398_76131147_76131182_76229360_76229610_76317744_76317942_76337048_76337170_76389531_76389699_76443550_76443672_76496253
ENSMUSG00000034098.15_76052293_76500797_1	chr3	+	1183	8	NNC	ENSMUSG00000034098.15	novel	2938	15	NA	NA	69403	-114687	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATACACGTGCATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	76052292	76500797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_76052411_76229360_76229610_76317744_76317942_76337048_76337170_76389531_76389699_76443550_76443672_76496253_76496416_76500749
ENSMUSG00000034098.15_76052328_76500817_1	chr3	+	1189	9	ISM	ENSMUSG00000034098.15	ENSMUST00000160261.8	3173	16	69438	115126	69438	-114667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAATGAAGCCGGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	76052327	76500817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_76052398_76131147_76131182_76229360_76229610_76317744_76317942_76337048_76337170_76389531_76389699_76443550_76443672_76496253_76496416_76500749
ENSMUSG00000034098.15_76052376_76500884_1	chr3	+	1208	9	ISM	ENSMUSG00000034098.15	ENSMUST00000160261.8	3173	16	69486	115059	69486	-114600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATTGAGCCCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	76052375	76500884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_76052398_76131147_76131182_76229360_76229610_76317744_76317942_76337048_76337170_76389531_76389699_76443550_76443672_76496253_76496416_76500749
ENSMUSG00000034098.15_76229359_76536339_1	chr3	+	1274	8	ISM	ENSMUSG00000034098.15	ENST00000427802.2	2938	15	247485	79145	246469	-79145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTATCTGAAAAGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	76229358	76536339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_76229610_76317744_76317942_76337048_76337170_76389531_76389699_76443550_76443672_76496253_76496416_76500749_76500885_76536219
ENSMUSG00000034098.15_76229499_76555638_1	chr3	+	1193	9	NNC	ENSMUSG00000034098.15	novel	2938	15	NA	NA	246609	-59846	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGTTAATGTCAAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	76229498	76555638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_76229610_76317744_76317942_76337048_76337170_76389531_76389699_76443550_76443672_76496253_76496416_76500749_76500885_76536219_76536343_76555582
ENSMUSG00000034098.15_76229556_76555691_1	chr3	+	1189	9	NNC	ENSMUSG00000034098.15	novel	2938	15	NA	NA	246666	-59793	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTTGATTGTTGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	76229555	76555691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_76229610_76317744_76317942_76337048_76337170_76389531_76389699_76443550_76443672_76496253_76496416_76500749_76500885_76536219_76536343_76555582
ENSMUSG00000034098.15_76317743_76567075_1	chr3	+	1288	9	NNC	ENSMUSG00000034098.15	novel	2938	15	NA	NA	334853	-48409	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATGTCATGGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	76317742	76567075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_76317942_76337048_76337170_76389531_76389699_76443550_76443672_76496253_76496416_76500749_76500885_76536219_76536343_76555582_76555733_76566965
ENSMUSG00000034098.15_76317877_76569111_1	chr3	+	1199	10	NNC	ENSMUSG00000034098.15	novel	2938	15	NA	NA	334987	-46373	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCAGTTGGGAAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	76317876	76569111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_76317942_76337048_76337170_76389531_76389699_76443550_76443672_76496253_76496416_76500749_76500885_76536219_76536343_76555582_76555733_76566965_76567074_76569064
ENSMUSG00000034098.15_76317926_76569164_1	chr3	+	1203	10	NNC	ENSMUSG00000034098.15	novel	2938	15	NA	NA	335036	-46320	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACACTTATTATTACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	76317925	76569164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_76317942_76337048_76337170_76389531_76389699_76443550_76443672_76496253_76496416_76500749_76500885_76536219_76536343_76555582_76555733_76566965_76567074_76569064
ENSMUSG00000034098.15_76337045_76614856_1	chr3	+	1291	10	NNC	ENSMUSG00000034098.15	novel	2938	15	NA	NA	354155	-628	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAACCTGAAGGACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	76337044	76614856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_76337170_76389531_76389699_76443550_76443672_76496253_76496416_76500749_76500885_76536219_76536343_76555582_76555733_76566965_76567074_76569064_76569190_76614781
ENSMUSG00000034098.15_76389532_76615010_1	chr3	+	1320	9	NNC	ENSMUSG00000034098.15	novel	2938	15	NA	NA	406642	-474	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGATGTGACGGGCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	76389531	76615010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_76389699_76443550_76443672_76496253_76496416_76500749_76500885_76536219_76536343_76555582_76555733_76566965_76567074_76569064_76569190_76614781
ENSMUSG00000034098.15_76496294_76615206_1	chr3	+	1188	7	NNC	ENSMUSG00000034098.15	novel	2938	15	NA	NA	513404	-278	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATGGCAGCTCAAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	76496293	76615206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_76496416_76500749_76500885_76536219_76536343_76555582_76555733_76566965_76567074_76569064_76569190_76614781
ENSMUSG00000034098.15_76500857_76615484_1	chr3	+	1233	6	ISM	ENSMUSG00000034098.15	ENST00000427802.2	2938	15	518983	0	517967	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCCTCTTACCTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	76500856	76615484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_76500885_76536219_76536339_76555582_76555733_76566965_76567074_76569064_76569190_76614781
ENSMUSG00000034101.15_84431238_84508385_1	chr2	-	5276	20	NNC	ENSMUSG00000101645.2	novel	5283	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACTAAGGGGCATATCT	NA	NA	NA	NA	NA	NA	NA	NA	84508385	84431237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440062_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84506440_84506502_84508194
ENSMUSG00000034101.15_84431238_84508385_2	chr2	-	5276	20	NNC	ENSMUSG00000101645.2	novel	5283	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACTAAGGGGCATATCT	NA	NA	NA	NA	NA	NA	NA	NA	84508385	84431237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444341_84445427_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84506440_84506502_84508194
ENSMUSG00000034101.15_84431238_84508385_3	chr2	-	5275	20	NNC	ENSMUSG00000101645.2	novel	5283	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACTAAGGGGCATATCT	NA	NA	NA	NA	NA	NA	NA	NA	84508385	84431237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443265_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84506440_84506502_84508194
ENSMUSG00000034101.15_84431238_84508385_4	chr2	-	5280	20	NNC	ENSMUSG00000101645.2	novel	5283	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACTAAGGGGCATATCT	NA	NA	NA	NA	NA	NA	NA	NA	84508385	84431237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454614_84454903_84456363_84456482_84506440_84506502_84508194
ENSMUSG00000034101.15_84431238_84508385_5	chr2	-	5274	20	NNC	ENSMUSG00000101645.2	novel	5283	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACTAAGGGGCATATCT	NA	NA	NA	NA	NA	NA	NA	NA	84508385	84431237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454896_84456363_84456482_84506440_84506502_84508194
ENSMUSG00000034101.15_84431238_84508385_6	chr2	-	5280	20	NNC	ENSMUSG00000101645.2	novel	5283	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACTAAGGGGCATATCT	NA	NA	NA	NA	NA	NA	NA	NA	84508385	84431237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84506441_84506502_84508194
ENSMUSG00000034101.15_84431238_84508385_7	chr2	-	5281	20	FSM	ENSMUSG00000101645.2	ENST00000674116.1	5283	20	2	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACTAAGGGGCATATCT	NA	NA	NA	NA	NA	NA	NA	NA	84508385	84431237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84506440_84506502_84508194
ENSMUSG00000034101.15_84431238_84508385_8	chr2	-	5280	20	NNC	ENSMUSG00000101645.2	novel	5283	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1035	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACTAAGGGGCATATCT	NA	NA	NA	NA	NA	NA	NA	NA	84508385	84431237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444232_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84506440_84506502_84508194
ENSMUSG00000034101.15_84432973_84445532_1	chr2	-	1559	12	ISM	ENSMUSG00000034101.15	ENST00000673683.1	5296	19	35133	1831	34292	-1831	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGCAGATTAGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	84445532	84432972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431
ENSMUSG00000034109.16_75784437_75786009_1	chr3	-	1105	2	ISM	ENSMUSG00000034109.16	ENSMUST00000167078.8	2902	16	78235	-529	78227	529	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAGGAAAGCATGCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	75786009	75784436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_75785485_75785952
ENSMUSG00000034109.16_75784647_75794062_1	chr3	-	1062	4	ISM	ENSMUSG00000034109.16	ENSMUST00000167078.8	2902	16	70182	-319	70174	319	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGAAAGTCTCAAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	75794062	75784646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979
ENSMUSG00000034109.16_75784966_75800202_1	chr3	-	1134	7	ISM	ENSMUSG00000034109.16	ENSMUST00000167078.8	2902	16	64042	0	64034	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAAAAAGGTGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	75800202	75784965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089
ENSMUSG00000034109.16_75785292_75802237_1	chr3	-	1045	8	ISM	ENSMUSG00000034109.16	ENSMUST00000167078.8	2902	16	62007	326	61999	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGCTCTAAAACAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	75802237	75785291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141
ENSMUSG00000034109.16_75785373_75802331_1	chr3	-	1058	8	ISM	ENSMUSG00000034109.16	ENSMUST00000167078.8	2902	16	61913	407	61905	-407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGAGAAATCACATCGC	NA	NA	NA	NA	NA	NA	NA	NA	75802331	75785372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141
ENSMUSG00000034109.16_75802160_75863612_1	chr3	-	1138	9	ISM	ENSMUSG00000034109.16	ENSMUST00000117242.8	4551	16	644	18670	624	-17194	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACCCTCAAGCTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	75863612	75802159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
ENSMUSG00000034109.16_75802334_75863684_1	chr3	-	1036	9	ISM	ENSMUSG00000034109.16	ENSMUST00000117242.8	4551	16	572	18844	552	-17368	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGCCAGAGGAGCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	75863684	75802333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
ENSMUSG00000034112.10_120447966_120482853_1	chr8	+	2440	23	NNC	ENSMUSG00000034112.10	novel	2459	23	NA	NA	14	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGAGTGATGGGAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	120447965	120482853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_120448030_120451757_120451848_120453040_120453127_120456908_120457018_120461026_120461177_120461248_120461318_120461965_120462042_120465132_120465200_120469068_120469194_120469331_120469430_120471061_120471159_120472252_120472343_120474352_120474455_120474893_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479682_120479800_120480940_120481089_120482276_120482376_120482713
ENSMUSG00000034112.10_120447966_120482853_2	chr8	+	2440	23	NNC	ENSMUSG00000034112.10	novel	2459	23	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGAGTGATGGGAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	120447965	120482853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_120448030_120451757_120451848_120453040_120453127_120456908_120457018_120461026_120461172_120461248_120461318_120461965_120462042_120465132_120465200_120469068_120469194_120469331_120469430_120471056_120471159_120472252_120472343_120474352_120474455_120474893_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479682_120479800_120480940_120481089_120482276_120482376_120482713
ENSMUSG00000034112.10_120447966_120482853_3	chr8	+	2441	23	NNC	ENSMUSG00000034112.10	novel	2459	23	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	690	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGAGTGATGGGAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	120447965	120482853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_120448030_120451757_120451848_120453040_120453127_120456908_120457018_120461026_120461177_120461248_120461318_120461965_120462042_120465132_120465200_120469068_120469194_120469331_120469430_120471056_120471159_120472256_120472343_120474352_120474455_120474893_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479682_120479800_120480940_120481089_120482276_120482376_120482713
ENSMUSG00000034112.10_120447966_120482853_4	chr8	+	2445	23	FSM	ENSMUSG00000034112.10	ENST00000262429.9	2459	23	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGAGTGATGGGAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	120447965	120482853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_120448030_120451757_120451848_120453040_120453127_120456908_120457018_120461026_120461177_120461248_120461318_120461965_120462042_120465132_120465200_120469068_120469194_120469331_120469430_120471056_120471159_120472252_120472343_120474352_120474455_120474893_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479682_120479800_120480940_120481089_120482276_120482376_120482713
ENSMUSG00000034112.10_120451754_120482853_1	chr8	+	2378	22	NNC	ENSMUSG00000034112.10	novel	2459	23	NA	NA	3802	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGAGTGATGGGAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	120451753	120482853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_120451848_120453040_120453127_120456908_120457018_120461026_120461177_120461248_120461318_120461965_120462042_120465132_120465200_120469068_120469194_120469331_120469430_120471056_120471159_120472252_120472343_120474352_120474455_120474893_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479682_120479800_120480940_120481089_120482283_120482376_120482713
ENSMUSG00000034112.10_120451754_120482853_2	chr8	+	2384	22	NNC	ENSMUSG00000034112.10	novel	2459	23	NA	NA	3802	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGAGTGATGGGAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	120451753	120482853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_120451848_120453040_120453127_120456908_120457018_120461026_120461177_120461248_120461318_120461965_120462042_120465132_120465200_120469068_120469194_120469331_120469430_120471056_120471159_120472252_120472343_120474352_120474455_120474893_120475051_120475763_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479682_120479800_120480940_120481089_120482276_120482376_120482713
ENSMUSG00000034112.10_120451754_120482853_3	chr8	+	2379	22	NNC	ENSMUSG00000034112.10	novel	2459	23	NA	NA	3802	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGAGTGATGGGAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	120451753	120482853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_120451848_120453040_120453127_120456914_120457018_120461026_120461177_120461248_120461318_120461965_120462042_120465132_120465200_120469068_120469194_120469331_120469430_120471056_120471159_120472252_120472343_120474352_120474455_120474893_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479682_120479800_120480940_120481089_120482276_120482376_120482713
ENSMUSG00000034112.10_120451754_120482853_4	chr8	+	2380	22	NNC	ENSMUSG00000034112.10	novel	2459	23	NA	NA	3802	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGAGTGATGGGAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	120451753	120482853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_120451848_120453040_120453127_120456908_120457018_120461026_120461177_120461248_120461318_120461965_120462042_120465132_120465195_120469068_120469194_120469331_120469430_120471056_120471159_120472252_120472343_120474352_120474455_120474893_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479682_120479800_120480940_120481089_120482276_120482376_120482713
ENSMUSG00000034112.10_120451754_120482853_5	chr8	+	2384	22	NNC	ENSMUSG00000034112.10	novel	2459	23	NA	NA	3802	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGAGTGATGGGAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	120451753	120482853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_120451848_120453041_120453127_120456908_120457018_120461026_120461177_120461248_120461318_120461965_120462042_120465132_120465200_120469068_120469194_120469331_120469430_120471056_120471159_120472252_120472343_120474352_120474455_120474893_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479682_120479800_120480940_120481089_120482276_120482376_120482713
ENSMUSG00000034112.10_120451754_120482853_6	chr8	+	2381	22	NNC	ENSMUSG00000034112.10	novel	2459	23	NA	NA	3802	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGAGTGATGGGAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	120451753	120482853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_120451848_120453040_120453127_120456908_120457018_120461026_120461177_120461248_120461318_120461965_120462042_120465132_120465200_120469068_120469194_120469331_120469430_120471056_120471159_120472252_120472343_120474352_120474455_120474893_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479530_120479596_120479682_120479800_120480940_120481089_120482276_120482376_120482713
ENSMUSG00000034112.10_120451754_120482853_7	chr8	+	2378	22	NNC	ENSMUSG00000034112.10	novel	2459	23	NA	NA	3802	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGAGTGATGGGAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	120451753	120482853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_120451848_120453040_120453127_120456908_120457018_120461033_120461177_120461248_120461318_120461965_120462042_120465132_120465200_120469068_120469194_120469331_120469430_120471056_120471159_120472252_120472343_120474352_120474455_120474893_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479682_120479800_120480940_120481089_120482276_120482376_120482713
ENSMUSG00000034112.10_120451754_120482853_8	chr8	+	2379	22	NNC	ENSMUSG00000034112.10	novel	2459	23	NA	NA	3802	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGAGTGATGGGAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	120451753	120482853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_120451848_120453040_120453127_120456908_120457018_120461026_120461177_120461248_120461318_120461965_120462042_120465132_120465200_120469068_120469194_120469331_120469430_120471056_120471153_120472252_120472343_120474352_120474455_120474893_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479682_120479800_120480940_120481089_120482276_120482376_120482713
ENSMUSG00000034112.10_120451754_120482853_9	chr8	+	2379	22	NNC	ENSMUSG00000034112.10	novel	2459	23	NA	NA	3802	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGAGTGATGGGAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	120451753	120482853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_120451848_120453040_120453127_120456908_120457018_120461026_120461177_120461248_120461318_120461965_120462042_120465132_120465200_120469068_120469194_120469331_120469430_120471056_120471159_120472252_120472343_120474352_120474455_120474893_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479682_120479800_120480940_120481089_120482276_120482376_120482719
ENSMUSG00000034112.10_120451808_120482852_1	chr8	+	2329	22	NNC	ENSMUSG00000034112.10	novel	2459	23	NA	NA	3856	-1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTGAGTGATGGGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	120451807	120482852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_120451848_120453040_120453127_120456908_120457018_120461026_120461177_120461248_120461318_120461965_120462042_120465132_120465200_120469068_120469194_120469331_120469430_120471056_120471159_120472252_120472343_120474352_120474455_120474893_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479683_120479800_120480940_120481089_120482276_120482376_120482713
ENSMUSG00000034116.18_57602987_57631804_1	chr17	+	2282	24	NNC	ENSMUSG00000034116.18	novel	2293	24	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3633	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGGCCATCTGGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	57602986	57631804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_57603099_57603551_57603611_57603699_57603769_57604048_57604158_57604245_57604342_57605771_57605841_57606100_57606205_57606841_57606942_57608180_57608277_57608860_57608930_57609073_57609161_57609264_57609351_57610014_57610148_57610833_57610944_57611823_57611926_57612279_57612402_57612662_57612709_57613106_57613244_57614038_57614100_57616451_57616484_57618783_57618901_57622243_57622332_57625627_57625743_57631641
ENSMUSG00000034116.18_57602987_57631804_2	chr17	+	2269	23	NNC	ENSMUSG00000034116.18	novel	2293	24	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGGCCATCTGGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	57602986	57631804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_57603099_57603551_57603611_57603699_57603769_57604048_57604158_57604245_57604342_57605771_57605841_57606100_57606205_57606841_57606942_57608180_57608277_57608860_57608930_57609073_57609161_57609264_57609351_57610014_57610148_57610833_57610944_57611823_57611926_57612279_57612402_57612662_57612709_57613106_57613244_57614033_57614100_57618769_57618901_57622243_57622332_57625627_57625743_57631641
ENSMUSG00000034116.18_57602987_57631804_3	chr17	+	2287	24	FSM	ENSMUSG00000034116.18	ENST00000539284.2	2291	24	5	-1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGGCCATCTGGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	57602986	57631804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_57603099_57603551_57603611_57603699_57603769_57604048_57604158_57604245_57604342_57605771_57605841_57606100_57606205_57606841_57606942_57608180_57608277_57608860_57608930_57609073_57609161_57609264_57609351_57610014_57610148_57610833_57610944_57611823_57611926_57612279_57612402_57612662_57612709_57613106_57613244_57614033_57614100_57616451_57616484_57618783_57618901_57622243_57622332_57625627_57625743_57631641
ENSMUSG00000034116.18_57602987_57631804_4	chr17	+	2277	23	NNC	ENSMUSG00000034116.18	novel	2293	24	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGGCCATCTGGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	57602986	57631804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_57603099_57603551_57603611_57603699_57603769_57604048_57604158_57604245_57604342_57605771_57605841_57606100_57606205_57606841_57606942_57608180_57608277_57608860_57608930_57609073_57609161_57609264_57609351_57610014_57610148_57610833_57610944_57611823_57611926_57612279_57612402_57612662_57612709_57613106_57613244_57614033_57614122_57618783_57618901_57622243_57622332_57625627_57625743_57631641
ENSMUSG00000034116.18_57609073_57618903_1	chr17	+	976	10	ISM	ENSMUSG00000034116.18	ENST00000304076.6	2227	23	6093	12900	6091	-12900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTCCTTCCATGACCAC	NA	NA	NA	NA	NA	NA	NA	NA	57609072	57618903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_57609161_57609264_57609351_57610014_57610148_57610833_57610944_57611823_57611926_57612279_57612402_57612662_57612709_57613106_57613244_57616451_57616484_57618783
ENSMUSG00000034116.18_57609264_57622332_1	chr17	+	975	10	ISM	ENSMUSG00000034116.18	ENST00000304076.6	2227	23	6284	9471	6282	-9471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGCTGCTATCGGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	57609263	57622332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_57609351_57610014_57610148_57610833_57610944_57611823_57611926_57612279_57612402_57612662_57612709_57613106_57613244_57616451_57616484_57618783_57618901_57622243
ENSMUSG00000034116.18_57610064_57631690_1	chr17	+	1002	11	ISM	ENSMUSG00000034116.18	ENST00000304076.6	2227	23	7084	113	7082	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGGGACAGGTCGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	57610063	57631690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_57610148_57610833_57610944_57611823_57611926_57612279_57612402_57612662_57612709_57613106_57613244_57616451_57616484_57618783_57618901_57622243_57622332_57625627_57625743_57631641
ENSMUSG00000034116.18_57610832_57631804_1	chr17	+	1034	10	ISM	ENSMUSG00000034116.18	ENST00000304076.6	2227	23	7852	-1	7850	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGGCCATCTGGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	57610831	57631804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_57610944_57611823_57611926_57612279_57612402_57612662_57612709_57613106_57613244_57616451_57616484_57618783_57618901_57622243_57622332_57625627_57625743_57631641
ENSMUSG00000034118.16_130108211_130164553_1	chr5	+	2027	6	NNC	ENSMUSG00000034118.16	novel	2050	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTAAATGTGAAGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	130108210	130164553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_130108503_130130430_130131377_130143308_130143508_130158348_130158400_130163305_130163340_130164048
ENSMUSG00000034118.16_130108421_130164570_1	chr5	+	1840	6	FSM	ENSMUSG00000034118.16	ENSMUST00000040721.9	2050	6	210	0	210	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAATGGTCCCGTTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	130108420	130164570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_130108503_130130430_130131377_130143308_130143508_130158348_130158400_130163299_130163340_130164048
ENSMUSG00000034118.16_130130429_130164553_1	chr5	+	1748	5	FSM	ENSMUSG00000034118.16	ENST00000649664.1	1719	5	-30	1	-30	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTAAATGTGAAGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	130130428	130164553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_130131377_130143308_130143508_130158348_130158400_130163299_130163345_130164048
ENSMUSG00000034118.16_130130558_130164554_1	chr5	+	1614	5	NNC	ENSMUSG00000034118.16	novel	1719	5	NA	NA	99	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAATGTGAAGCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	130130557	130164554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_130131377_130143308_130143508_130158348_130158400_130163305_130163345_130164048
ENSMUSG00000034120.19_116741194_116743617_1	chr11	-	1093	3	FSM	ENSMUSG00000034120.19	ENST00000508921.7	1235	3	142	0	142	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGCACTAGGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	116743617	116741193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116741788_116742846_116743158_116743429
ENSMUSG00000034120.19_116741582_116743449_1	chr11	-	573	3	FSM	ENSMUSG00000034120.19	ENSMUST00000092404.13	1899	3	471	855	310	-388	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATTTAGTGAGGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	116743449	116741581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116741788_116742846_116743158_116743393
ENSMUSG00000034120.19_116741635_116743503_1	chr11	-	574	3	FSM	ENSMUSG00000034120.19	ENSMUST00000092404.13	1899	3	417	908	256	-441	multi-exon	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGGCAAACTTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	116743503	116741634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116741788_116742846_116743158_116743393
ENSMUSG00000034120.19_116741671_116743568_1	chr11	-	603	3	FSM	ENSMUSG00000034120.19	ENSMUST00000092404.13	1899	3	352	944	191	-477	multi-exon	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTCTAACTTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	116743568	116741670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116741788_116742846_116743158_116743393
ENSMUSG00000034120.19_116742873_116743729_1	chr11	-	621	2	ISM	ENSMUSG00000034120.19	ENSMUST00000190993.7	1326	5	169	1993	30	-1679	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGCAGTTTCTTCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	116743729	116742872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116743158_116743393
ENSMUSG00000034121.13_87744053_87753888_1	chr11	+	1529	16	FSM	ENSMUSG00000034121.13	ENST00000313863.11	1580	16	-1	52	-1	-52	multi-exon	FALSE	canonical	NA	NA	NA	NA	1895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCATCCAGTGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	87744052	87753888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87753566_87753665_87753762
ENSMUSG00000034121.13_87744491_87753888_1	chr11	+	1498	15	ISM	ENSMUSG00000034121.13	ENST00000313863.11	1580	16	437	52	437	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCATCCAGTGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	87744490	87753888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87753566_87753665_87753762
ENSMUSG00000034121.13_87748759_87752845_1	chr11	+	496	8	ISM	ENSMUSG00000034121.13	ENST00000676787.1	1668	17	4705	1095	4705	-1095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGAGCTGGGTCTCGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	87748758	87752845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810
ENSMUSG00000034121.13_87751935_87753888_1	chr11	+	537	5	ISM	ENSMUSG00000034121.13	ENST00000678463.1	1714	17	7881	52	7881	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCATCCAGTGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	87751934	87753888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87752006_87752094_87752203_87752810_87752945_87753566_87753665_87753762
ENSMUSG00000034126.6_87156847_87163322_1	chr12	-	432	6	ISM	ENSMUSG00000034126.6	ENST00000682247.1	2477	21	30962	1028	30962	-1028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCTCCCCTGGGTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	87163322	87156846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87156893_87157075_87157206_87158110_87158217_87158297_87158358_87158652_87158725_87163304
ENSMUSG00000034126.6_87171611_87178575_1	chr12	-	472	5	ISM	ENSMUSG00000034126.6	ENST00000682247.1	2477	21	15709	15792	15709	-15792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAAGAAGTATAATGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	87178575	87171610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445
ENSMUSG00000034126.6_87175751_87180242_1	chr12	-	435	4	ISM	ENSMUSG00000034126.6	ENST00000682247.1	2477	21	14042	19932	14042	-19932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAATGCTTCTATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	87180242	87175750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87175810_87177062_87177170_87178445_87178606_87180133
ENSMUSG00000034126.6_87184813_87194248_1	chr12	-	458	3	ISM	ENSMUSG00000034126.6	ENST00000682247.1	2477	21	36	28994	36	-28994	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATACGAGCACCACAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	87194248	87184812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87184882_87186417_87186503_87193944
ENSMUSG00000034152.7_74317607_74322140_1	chr13	-	2920	3	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	34688	0	34688	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTAGGATTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	74322140	74317606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74320364_74321414_74321543_74322105
ENSMUSG00000034152.7_74317736_74322202_1	chr13	-	2853	3	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	34626	129	34626	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGAGAGATGCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	74322202	74317735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74320364_74321414_74321543_74322105
ENSMUSG00000034152.7_74317814_74322259_1	chr13	-	2832	3	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	34569	207	34569	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTCCTCAGCCGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	74322259	74317813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74320364_74321414_74321543_74322105
ENSMUSG00000034152.7_74317980_74330199_1	chr13	-	2834	5	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	26629	373	26629	-373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTTTGATATGCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	74330199	74317979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162
ENSMUSG00000034152.7_74318123_74330426_1	chr13	-	2836	6	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	26402	516	26402	-516	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACTCCTTTCCTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	74330426	74318122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395
ENSMUSG00000034152.7_74318157_74330496_1	chr13	-	2872	6	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	26332	550	26332	-550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAGCAGCCCTCAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	74330496	74318156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395
ENSMUSG00000034152.7_74318407_74338208_1	chr13	-	2879	9	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	18620	800	18620	-800	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGCCAGAACCAGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	74338208	74318406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188
ENSMUSG00000034152.7_74318504_74338247_1	chr13	-	2821	9	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	18581	897	18581	-897	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCCCTTTCCTCATATC	NA	NA	NA	NA	NA	NA	NA	NA	74338247	74318503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188
ENSMUSG00000034152.7_74318550_74338306_1	chr13	-	2834	9	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	18522	943	18522	-943	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCACCAGTGAGATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	74338306	74318549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188
ENSMUSG00000034152.7_74318809_74340982_1	chr13	-	2831	10	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	15846	1202	15846	-1202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGCTGTTCTGAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	74340982	74318808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726
ENSMUSG00000034152.7_74318868_74341028_1	chr13	-	2818	10	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	15800	1261	15800	-1261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCATTAACATAATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	74341028	74318867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726
ENSMUSG00000034152.7_74319018_74341211_1	chr13	-	2851	10	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	15617	1411	15617	-1411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAGGTTATTGATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	74341211	74319017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726
ENSMUSG00000034152.7_74319272_74347665_1	chr13	-	2885	11	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	9163	1665	9163	-1665	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAGACAGGATAGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	74347665	74319271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574
ENSMUSG00000034152.7_74319386_74347716_1	chr13	-	2822	11	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	9112	1779	9112	-1779	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTAAAATGACCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	74347716	74319385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574
ENSMUSG00000034152.7_74319440_74347774_1	chr13	-	2826	11	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	9054	1833	9054	-1833	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTCCACTGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	74347774	74319439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574
ENSMUSG00000034152.7_74319543_74355108_1	chr13	-	2826	12	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	1720	1936	1720	-1936	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCCCTGCTTGACAATC	NA	NA	NA	NA	NA	NA	NA	NA	74355108	74319542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025
ENSMUSG00000034152.7_74319594_74355212_1	chr13	-	2879	12	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	1616	1987	1616	-1987	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTCAGAAGAAACATGAATT	NA	NA	NA	NA	NA	NA	NA	NA	74355212	74319593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025
ENSMUSG00000034154.16_119210466_119213891_1	chr2	-	390	4	ISM	ENSMUSG00000034154.16	ENST00000616814.4	4280	34	94128	5621	94128	-5621	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCCCTTTCAGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	119213891	119210465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119210603_119212390_119212480_119213344_119213448_119213830
ENSMUSG00000034154.16_119213365_119232905_1	chr2	-	410	4	ISM	ENSMUSG00000034154.16	ENST00000616814.4	4280	34	75114	8520	75114	-8520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAAGAACTGGAAAAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	119232905	119213364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119213448_119213830_119213990_119223333_119223407_119232810
ENSMUSG00000034154.16_119213860_119242976_1	chr2	-	392	4	ISM	ENSMUSG00000034154.16	ENST00000616814.4	4280	34	65043	9015	65043	-9015	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGCAGAGAGCCAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	119242976	119213859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119213990_119223333_119223407_119232810_119232906_119242882
ENSMUSG00000034154.16_119213918_119243024_1	chr2	-	382	4	ISM	ENSMUSG00000034154.16	ENST00000616814.4	4280	34	64995	9073	64995	-9073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACAAAACAGGTCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	119243024	119213917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119213990_119223333_119223407_119232810_119232906_119242882
ENSMUSG00000034154.16_119232846_119248901_1	chr2	-	386	3	ISM	ENSMUSG00000034154.16	ENST00000616814.4	4280	34	59118	28001	59118	344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGACGGGACATGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	119248901	119232845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119232906_119242882_119243109_119248801
ENSMUSG00000034154.16_119242923_119254164_1	chr2	-	406	3	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	53930	9733	53855	-9733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGACCCCAGAACGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	119254164	119242922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119243109_119248801_119248943_119254085
ENSMUSG00000034154.16_119242996_119254216_1	chr2	-	385	3	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	53878	9806	53803	-9806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGCTGGCTACGGATT	NA	NA	NA	NA	NA	NA	NA	NA	119254216	119242995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119243109_119248801_119248943_119254085
ENSMUSG00000034154.16_119248863_119256219_1	chr2	-	380	4	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	51875	15673	51800	-15673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTTCGTTGCTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	119256219	119248862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119248943_119254085_119254258_119255739_119255834_119256185
ENSMUSG00000034154.16_119254225_119257451_1	chr2	-	400	5	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	50643	21035	50568	-21035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGGCTCCACCAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	119257451	119254224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119254258_119255739_119255834_119256185_119256254_119257069_119257204_119257380
ENSMUSG00000034154.16_119262418_119269958_1	chr2	-	382	4	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	38136	29228	38061	-29228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGAGGTAGGCACTAG	NA	NA	NA	NA	NA	NA	NA	NA	119269958	119262417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119262494_119263671_119263815_119264629_119264690_119269855
ENSMUSG00000034154.16_119263775_119272949_1	chr2	-	363	5	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	35145	30585	35070	-30585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTAGCTACCAGCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	119272949	119263774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119263815_119264629_119264690_119269855_119269952_119272093_119272175_119272863
ENSMUSG00000034154.16_119272128_119275996_1	chr2	-	380	4	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	32098	38938	32023	-38938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGCATTGCCCTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	119275996	119272127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119272175_119272863_119273074_119274927_119274996_119275941
ENSMUSG00000034154.16_119272914_119276110_1	chr2	-	397	3	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	31984	39724	31909	-39724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTACCAGCTGAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	119276110	119272913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119273074_119274927_119274996_119275941
ENSMUSG00000034154.16_119273016_119277405_1	chr2	-	391	4	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	30689	39826	30614	-39826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTCTGGCTCTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	119277405	119273015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119273074_119274927_119274996_119275941_119276138_119277336
ENSMUSG00000034154.16_119277484_119281860_1	chr2	-	376	4	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	26234	44294	26159	-44294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGGAGACTCTGCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	119281860	119277483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119277541_119278685_119278740_119280483_119280699_119281810
ENSMUSG00000034154.16_119280570_119284683_1	chr2	-	397	3	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	23411	47380	23336	-47380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGAAGAAACACTTATCC	NA	NA	NA	NA	NA	NA	NA	NA	119284683	119280569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119280699_119281810_119281932_119284536
ENSMUSG00000034154.16_119280670_119286933_1	chr2	-	380	4	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	21161	47480	21086	-47480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGTGATGAAGAGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	119286933	119280669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119280699_119281810_119281932_119284536_119284699_119286865
ENSMUSG00000034154.16_119281845_119287131_1	chr2	-	396	4	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	20963	48655	20888	-48655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAATTCAAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	119287131	119281844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119281932_119284536_119284699_119286865_119286934_119287052
ENSMUSG00000034154.16_119284636_119288640_1	chr2	-	380	4	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	19454	51446	19379	-51446	internal_fragment	TRUE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAACTCAGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	119288640	119284635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119284699_119286865_119286934_119287052_119287223_119288561
ENSMUSG00000034154.16_119286891_119288741_1	chr2	-	393	3	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	19353	53701	19278	-53701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAGCAGAAAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	119288741	119286890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119286934_119287052_119287223_119288561
ENSMUSG00000034154.16_119287118_119307952_1	chr2	-	384	3	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	142	53928	67	-53928	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCTGGAGCAAGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	119307952	119287117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119287223_119288561_119288748_119307859
ENSMUSG00000034156.17_87666957_87668630_1	chr11	+	675	4	ISM	ENSMUSG00000034156.17	ENSMUST00000100644.10	7390	31	15544	8124	15544	-8120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGATCTTGGAGCAGATAC	NA	NA	NA	NA	NA	NA	NA	NA	87666956	87668630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87667165_87667250_87667491_87667872_87668062_87668592
ENSMUSG00000034158.10_37698818_37702883_1	chr16	+	1377	2	ISM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	10067	6337	10067	-6337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTCCACACCCCCAGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	37698817	37702883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37698927_37701615
ENSMUSG00000034161.9_76341966_76343527_1	chr15	+	667	2	FSM	ENSMUSG00000034161.9	ENSMUST00000043089.9	1035	2	246	122	246	-122	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGACCCAGGCCCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	76341965	76343527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76342387_76343281
ENSMUSG00000034161.9_76342034_76343649_1	chr15	+	721	2	FSM	ENSMUSG00000034161.9	ENSMUST00000043089.9	1035	2	314	0	314	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTTCCAAATTGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	76342033	76343649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76342387_76343281
ENSMUSG00000034161.9_76342116_76343649_1	chr15	+	639	2	FSM	ENSMUSG00000034161.9	ENSMUST00000043089.9	1035	2	396	0	396	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTTCCAAATTGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	76342115	76343649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76342387_76343281
ENSMUSG00000034165.17_47904395_47910096_1	chr17	+	1459	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	0	518	0	77	multi-exon	FALSE	canonical	NA	NA	NA	NA	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGATAGAAGCTTATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	47904394	47910096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000034165.17_47904672_47910253_1	chr17	+	1339	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	277	361	-38	234	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCGTGGTCATTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	47904671	47910253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000034165.17_47905681_47910422_1	chr17	+	1380	4	ISM	ENSMUSG00000034165.17	ENST00000372987.8	2174	5	971	181	971	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTCTCCTCACCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	47905680	47910422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000034165.17_47905783_47910614_1	chr17	+	1470	4	ISM	ENSMUSG00000034165.17	ENST00000372987.8	2174	5	1073	-11	1073	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	47905782	47910614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000034175.14_5049077_5055504_1	chr11	+	1677	8	ISM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	151	587	151	-587	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCACGCCTGGGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	5049076	5055504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432
ENSMUSG00000034175.14_5049273_5055640_1	chr11	+	1617	8	ISM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	347	451	-166	-451	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCTTCTTGATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5049272	5055640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432
ENSMUSG00000034175.14_5049433_5055914_1	chr11	+	1649	9	FSM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	507	177	-6	-177	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCCTAGTGACTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	5049432	5055914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
ENSMUSG00000034175.14_5049760_5056093_1	chr11	+	1682	8	ISM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	834	-2	321	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTCCTGAGTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	5049759	5056093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
ENSMUSG00000034175.14_5050394_5056093_1	chr11	+	1550	7	NIC	ENSMUSG00000034175.14	novel	1611	8	NA	NA	237	2	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTCCTGAGTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	5050393	5056093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055180_5055348_5055432_5055718_5055799
ENSMUSG00000034177.16_87553548_87621939_1	chr11	+	1922	9	NNC	ENSMUSG00000034177.16	novel	3773	11	NA	NA	6	-1347	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACGCCCACTATCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	87553547	87621939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_87554049_87555063_87555698_87609203_87609327_87617975_87618051_87618161_87618294_87618851_87618957_87620225_87620388_87620957_87621061_87621852
ENSMUSG00000034177.16_87553913_87622288_1	chr11	+	1906	9	NNC	ENSMUSG00000034177.16	novel	4310	10	NA	NA	0	-998	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGACTCCAGCTCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	87553912	87622288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_87554049_87555063_87555698_87609203_87609327_87617975_87618051_87618161_87618294_87618851_87618957_87620225_87620388_87620957_87621061_87621852
ENSMUSG00000034177.16_87554186_87618241_1	chr11	+	1786	4	ISM	ENSMUSG00000034177.16	ENSMUST00000165679.8	4310	10	273	8123	211	-5045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAATCGGAAGGCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	87554185	87618241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87555694_87609203_87609327_87617975_87618051_87618161
ENSMUSG00000034177.16_87554596_87621027_1	chr11	+	1765	7	ISM	ENSMUSG00000034177.16	ENSMUST00000092800.12	4037	9	-504	5338	-504	-2259	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTGCCCCCTCTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	87554595	87621027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87555694_87609203_87609327_87617975_87618051_87618161_87618294_87618851_87618957_87620225_87620388_87620957
ENSMUSG00000034177.16_87555375_87622708_1	chr11	+	1875	8	ISM	ENSMUSG00000034177.16	ENSMUST00000092800.12	4037	9	275	3657	0	-578	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCAATGCTTCCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	87555374	87622708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87555694_87609203_87609327_87617975_87618051_87618161_87618294_87618851_87618957_87620225_87620388_87620957_87621061_87621852
ENSMUSG00000034177.16_87555375_87622718_1	chr11	+	1879	8	NNC	ENSMUSG00000034177.16	novel	4037	9	NA	NA	0	-568	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCAACCCACAACGGCC	NA	NA	NA	NA	NA	NA	NA	NA	87555374	87622718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_87555694_87609203_87609327_87617975_87618051_87618167_87618294_87618851_87618957_87620225_87620388_87620957_87621061_87621852
ENSMUSG00000034177.16_87609199_87622938_1	chr11	+	1791	7	ISM	ENSMUSG00000034177.16	ENSMUST00000040089.5	3670	9	18476	3427	18476	-348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTTCCCCCACTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	87609198	87622938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87609327_87617975_87618051_87618161_87618294_87618851_87618957_87620225_87620388_87620957_87621061_87621852
ENSMUSG00000034177.16_87609227_87623011_1	chr11	+	1836	7	ISM	ENSMUSG00000034177.16	ENSMUST00000040089.5	3670	9	18504	3354	18504	-275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGTCCGGATAGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	87609226	87623011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87609327_87617975_87618051_87618161_87618294_87618851_87618957_87620225_87620388_87620957_87621061_87621852
ENSMUSG00000034177.16_87609281_87623058_1	chr11	+	1829	7	ISM	ENSMUSG00000034177.16	ENSMUST00000040089.5	3670	9	18558	3307	18558	-228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTTCACAGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	87609280	87623058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87609327_87617975_87618051_87618161_87618294_87618851_87618957_87620225_87620388_87620957_87621061_87621852
ENSMUSG00000034177.16_87618252_87625028_1	chr11	+	1818	6	ISM	ENSMUSG00000034177.16	ENSMUST00000040089.5	3670	9	27529	1337	27529	-338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGTCAGATGAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	87618251	87625028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87618294_87618851_87618957_87620225_87620388_87620957_87621061_87621852_87623212_87624981
ENSMUSG00000034177.16_87618938_87625165_1	chr11	+	1827	5	ISM	ENSMUSG00000034177.16	ENSMUST00000040089.5	3670	9	28215	1200	28215	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGAGTGCTGATGGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	87618937	87625165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87618957_87620225_87620388_87620957_87621061_87621852_87623212_87624981
ENSMUSG00000034177.16_87620200_87625294_1	chr11	+	1963	4	ISM	ENSMUSG00000034177.16	ENSMUST00000040089.5	3670	9	29477	1071	29477	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGCATTTGTGGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	87620199	87625294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87620388_87620957_87621061_87621852_87623212_87624981
ENSMUSG00000034177.16_87620358_87625294_1	chr11	+	1805	4	ISM	ENSMUSG00000034177.16	ENSMUST00000040089.5	3670	9	29635	1071	29635	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGCATTTGTGGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	87620357	87625294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87620388_87620957_87621061_87621852_87623212_87624981
ENSMUSG00000034177.16_87621001_87626198_1	chr11	+	1833	4	ISM	ENSMUSG00000034177.16	ENST00000583753.5	2831	9	65626	162	30278	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGGGATCCTCCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	87621000	87626198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87621061_87621852_87623212_87624981_87625330_87626132
ENSMUSG00000034177.16_87621968_87626365_1	chr11	+	1825	3	ISM	ENSMUSG00000034177.16	ENST00000583753.5	2831	9	66593	-5	31245	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTTTGTGGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	87621967	87626365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_87623212_87624981_87625330_87626132
ENSMUSG00000034187.19_103713627_103749760_1	chr11	-	951	7	ISM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	95122	1019	95122	-1019	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTTTCAGAGATATTTC	NA	NA	NA	NA	NA	NA	NA	NA	103749760	103713626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720
ENSMUSG00000034187.19_103713887_103752852_1	chr11	-	919	8	ISM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	92030	1279	92030	-1279	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGACTGCTGGGCTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	103752852	103713886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718
ENSMUSG00000034187.19_103752798_103801395_1	chr11	-	930	7	ISM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	43487	40190	43487	-40190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTAGATGACGGAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	103801395	103752797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268
ENSMUSG00000034187.19_103763016_103804713_1	chr11	-	917	7	ISM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	40169	50408	40169	-50408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTCCACAGCCATGAACA	NA	NA	NA	NA	NA	NA	NA	NA	103804713	103763015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626
ENSMUSG00000034189.6_120288953_120292480_1	chr8	-	2022	2	ISM	ENSMUSG00000034189.6	ENSMUST00000212517.2	2215	5	4254	-586	4254	-225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGACTCAGCTAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	120292480	120288952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_120290877_120292382
ENSMUSG00000034189.6_120289700_120294572_1	chr8	-	1919	4	ISM	ENSMUSG00000034189.6	ENSMUST00000212517.2	2215	5	2162	161	2162	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGTATAAGGTAGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	120294572	120289699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504
ENSMUSG00000034189.6_120289773_120294649_1	chr8	-	1923	4	ISM	ENSMUSG00000034189.6	ENSMUST00000212517.2	2215	5	2085	234	2085	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCAGGAGCGTTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	120294649	120289772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504
ENSMUSG00000034190.10_69954668_69956038_1	chr14	-	1157	2	ISM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	13945	219	13945	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGGACGGTGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	69956038	69954667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_69955750_69955963
ENSMUSG00000034190.10_69954847_69956873_1	chr14	-	1173	4	ISM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	13110	398	13110	-398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGCCAGGATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	69956873	69954846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847
ENSMUSG00000034190.10_69954971_69957233_1	chr14	-	1159	5	ISM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	12750	522	12750	-522	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGCCCCATTATAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	69957233	69954970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196
ENSMUSG00000034190.10_69955143_69958415_1	chr14	-	1158	7	ISM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	11568	694	11568	-694	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTCATGGCAGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	69958415	69955142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376
ENSMUSG00000034190.10_69955297_69958709_1	chr14	-	1153	8	ISM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	11274	848	11274	-848	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAACTGCTCCCCTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	69958709	69955296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655
ENSMUSG00000034190.10_69955328_69958788_1	chr14	-	1201	8	ISM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	11195	879	11195	-879	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTAGCCCTCTCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	69958788	69955327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655
ENSMUSG00000034190.10_69955377_69958841_1	chr14	-	1205	8	ISM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	11142	928	11142	-928	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTCATTCCAGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	69958841	69955376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655
ENSMUSG00000034190.10_69955603_69969663_1	chr14	-	1175	10	FSM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	320	1154	320	-1154	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGAAGAGGAGGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	69969663	69955602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
ENSMUSG00000034190.10_69955661_69969706_1	chr14	-	1160	10	FSM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	277	1212	277	-1212	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAGAGGCAGCCTTGCG	NA	NA	NA	NA	NA	NA	NA	NA	69969706	69955660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
ENSMUSG00000034190.10_69956057_69969983_1	chr14	-	1255	9	ISM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	0	1608	0	-1608	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAACGCTTTATACCAAC	NA	NA	NA	NA	NA	NA	NA	NA	69969983	69956056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
ENSMUSG00000034190.10_69956111_69969983_1	chr14	-	1201	9	ISM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	0	1662	0	-1662	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCTTCAGGACACCACC	NA	NA	NA	NA	NA	NA	NA	NA	69969983	69956110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
ENSMUSG00000034192.6_91492959_91499607_1	chr6	+	688	4	NNC	ENSMUSG00000034192.6	novel	743	4	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTAATGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	91492958	91499607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_91493061_91494035_91494141_91496530_91496627_91499222
ENSMUSG00000034194.19_69934757_69942762_1	chr14	-	815	5	ISM	ENSMUSG00000034194.19	ENSMUST00000121142.4	1958	7	2180	0	2180	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGATTGCGTCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	69942762	69934756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582
ENSMUSG00000034194.19_69941550_69943330_1	chr14	-	774	2	ISM	ENSMUSG00000034194.19	ENSMUST00000121142.4	1958	7	1612	6793	1612	-6793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTAAAATAGAGAAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	69943330	69941549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_69941576_69942582
ENSMUSG00000034194.19_69943074_69944942_1	chr14	-	832	3	ISM	ENSMUSG00000034194.19	ENSMUST00000121142.4	1958	7	0	8317	0	-8317	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAGCCTAGAGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	69944942	69943073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_69943328_69943995_69944134_69944502
ENSMUSG00000034194.19_69943204_69945033_1	chr14	-	469	4	ISM	ENSMUSG00000034194.19	ENSMUST00000118374.8	1726	8	0	8448	0	-8447	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGCTGGCATCGTGGACG	NA	NA	NA	NA	NA	NA	NA	NA	69945033	69943203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_69943328_69943995_69944134_69944502_69944631_69944954
ENSMUSG00000034201.14_5010600_5012298_1	chr11	-	1362	2	ISM	ENSMUSG00000034201.14	ENST00000621062.4	2453	6	2999	98	2979	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTATTGAATGCCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	5012298	5010599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5011818_5012154
ENSMUSG00000034201.14_5010756_5012701_1	chr11	-	1439	4	ISM	ENSMUSG00000034201.14	ENST00000621062.4	2453	6	2596	254	2576	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTGGCCTTAACCT	NA	NA	NA	NA	NA	NA	NA	NA	5012701	5010755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593
ENSMUSG00000034201.14_5011008_5014020_1	chr11	-	1382	5	ISM	ENSMUSG00000034201.14	ENST00000621062.4	2453	6	1277	506	1257	-506	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGAGGGGCACTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	5014020	5011007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825
ENSMUSG00000034201.14_5011077_5014083_1	chr11	-	1376	5	ISM	ENSMUSG00000034201.14	ENST00000621062.4	2453	6	1214	575	1194	-575	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGGGCTGCCTGGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	5014083	5011076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825
ENSMUSG00000034201.14_5011151_5014164_1	chr11	-	1383	5	ISM	ENSMUSG00000034201.14	ENST00000621062.4	2453	6	1133	649	1113	-649	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCTCCTCGTCTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	5014164	5011150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825
ENSMUSG00000034201.14_5011567_5015278_1	chr11	-	1369	6	FSM	ENSMUSG00000034201.14	ENST00000621062.4	2453	6	19	1065	-1	-1065	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCGCTCAGCTGTCGACC	NA	NA	NA	NA	NA	NA	NA	NA	5015278	5011566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014503_5015214
ENSMUSG00000034201.14_5014061_5014901_1	chr11	-	483	2	ISM	ENSMUSG00000034201.14	ENSMUST00000056649.13	2847	7	426	3689	376	-3559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGAGTGTGGTGCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	5014901	5014060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5014479_5014836
ENSMUSG00000034201.14_5014131_5015006_1	chr11	-	518	2	ISM	ENSMUSG00000034201.14	ENSMUST00000056649.13	2847	7	321	3759	271	-3629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCTGAGCTGGGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	5015006	5014130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5014479_5014836
ENSMUSG00000034201.14_5014310_5015278_1	chr11	-	491	3	ISM	ENSMUSG00000034201.14	ENSMUST00000056649.13	2847	7	49	3938	-1	-3808	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCCTCACGGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	5015278	5014309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5014479_5014836_5015095_5015214
ENSMUSG00000034203.9_91441567_91444765_1	chr6	-	830	2	ISM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	5763	2413	5763	-2413	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCAGGTGCTTGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	91444765	91441566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_91442296_91444664
ENSMUSG00000034203.9_91441809_91450431_1	chr6	-	720	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	97	2655	97	-2655	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAGTCCACTCCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	91450431	91441808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_91442296_91444664_91444764_91450297
ENSMUSG00000034210.15_115594976_115623652_1	chr4	+	2102	10	ISM	ENSMUSG00000034210.15	ENSMUST00000106522.9	2636	11	0	2636	0	-2636	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAATTGAGACCCAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	115594975	115623652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589
ENSMUSG00000034210.15_115595095_115623709_1	chr4	+	2040	10	ISM	ENSMUSG00000034210.15	ENSMUST00000106522.9	2636	11	119	2579	119	-2579	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGTTAATGATGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	115595094	115623709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589
ENSMUSG00000034210.15_115595270_115631210_1	chr4	+	2041	11	FSM	ENSMUSG00000034210.15	ENSMUST00000106525.9	2792	11	329	422	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATCAGGTATATTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	115595269	115631210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
ENSMUSG00000034210.15_115595430_115632961_1	chr4	+	2577	12	FSM	ENSMUSG00000034210.15	ENSMUST00000074425.13	4300	12	160	1563	160	1329	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTTTAGGTAACTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	115595429	115632961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034_115631203_115632257
ENSMUSG00000034210.15_115595763_115631633_1	chr4	+	1971	11	FSM	ENSMUSG00000034210.15	ENSMUST00000106525.9	2792	11	822	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAGAATATGTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	115595762	115631633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
ENSMUSG00000034210.15_115597611_115633583_1	chr4	+	2569	11	ISM	ENSMUSG00000034210.15	ENSMUST00000074425.13	4300	12	2341	941	1848	-941	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTATTGTCTTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	115597610	115633583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034_115631203_115632257
ENSMUSG00000034210.15_115597671_115633656_1	chr4	+	2582	11	ISM	ENSMUSG00000034210.15	ENSMUST00000074425.13	4300	12	2401	868	1908	-868	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAACTCAATGGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	115597670	115633656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034_115631203_115632257
ENSMUSG00000034210.15_115603736_115633786_1	chr4	+	2564	10	ISM	ENSMUSG00000034210.15	ENSMUST00000074425.13	4300	12	8466	738	7973	-738	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTACCATAATATTTACT	NA	NA	NA	NA	NA	NA	NA	NA	115603735	115633786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034_115631203_115632257
ENSMUSG00000034210.15_115617161_115634235_1	chr4	+	2557	6	ISM	ENSMUSG00000034210.15	ENSMUST00000074425.13	4300	12	21891	289	21398	-289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTAGATGTGGTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	115617160	115634235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034_115631203_115632257
ENSMUSG00000034210.15_115619438_115634351_1	chr4	+	2552	5	ISM	ENSMUSG00000034210.15	ENSMUST00000074425.13	4300	12	24168	173	23675	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAGAACGGTAAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	115619437	115634351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115619496_115621768_115621881_115623589_115623710_115631034_115631203_115632257
ENSMUSG00000034210.15_115621767_115634524_1	chr4	+	2669	4	ISM	ENSMUSG00000034210.15	ENSMUST00000074425.13	4300	12	26497	0	26004	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTGACTAGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	115621766	115634524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_115621881_115623589_115623710_115631034_115631203_115632257
ENSMUSG00000034211.15_129792761_129795755_1	chr5	+	1130	3	FSM	ENSMUSG00000034211.15	ENSMUST00000121813.8	868	3	139	-401	120	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGGCCTGTTTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	129792760	129795755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_129792975_129793790_129793931_129794979
ENSMUSG00000034211.15_129793791_129795545_1	chr5	+	702	2	NNC	ENSMUSG00000034211.15	novel	859	3	NA	NA	1150	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	129793790	129795545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_129793925_129794977
ENSMUSG00000034211.15_129793791_129795545_2	chr5	+	706	2	ISM	ENSMUSG00000034211.15	ENSMUST00000119985.2	859	3	1150	-34	1150	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	129793790	129795545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129793931_129794979
ENSMUSG00000034212.15_92813867_92827280_1	chr1	-	354	3	ISM	ENSMUSG00000034212.15	ENST00000405002.5	825	4	7868	0	3348	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCAGGTCAGCCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	92827280	92813866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_92814017_92823790_92823935_92827220
ENSMUSG00000034212.15_92813962_92834841_1	chr1	-	423	4	FSM	ENSMUSG00000034212.15	ENST00000405002.5	825	4	307	95	307	-95	multi-exon	FALSE	canonical	NA	NA	NA	NA	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCGCTCGGACGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	92834841	92813961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_92814017_92823790_92823935_92827220_92827388_92834784
ENSMUSG00000034212.15_92823791_92834865_1	chr1	-	390	3	NNC	ENSMUSG00000034212.15	novel	825	4	NA	NA	283	-9924	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAGATGCCGTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	92834865	92823790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_92823935_92827222_92827388_92834784
ENSMUSG00000034212.15_92823844_92834945_1	chr1	-	417	3	NNC	ENSMUSG00000034212.15	novel	825	4	NA	NA	203	-9977	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCCAACGAGAAGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	92834945	92823843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_92823935_92827222_92827388_92834784
ENSMUSG00000034212.15_92823844_92834945_2	chr1	-	419	3	ISM	ENSMUSG00000034212.15	ENST00000405002.5	825	4	203	9977	203	-9977	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCCAACGAGAAGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	92834945	92823843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_92823935_92827220_92827388_92834784
ENSMUSG00000034216.13_119119519_119127620_1	chr2	+	573	4	FSM	ENSMUSG00000034216.13	ENST00000558474.1	573	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCCAGGAGCTGCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	119119518	119127620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119127374
ENSMUSG00000034216.13_119120652_119127976_1	chr2	+	2689	4	ISM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	1429	958	1133	356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGACCTGGATGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	119120651	119127976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119120776_119123178_119123271_119123399_119125271_119127374
ENSMUSG00000034216.13_119123447_119128260_1	chr2	+	2710	2	ISM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	4224	674	3928	640	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGCTTCAGACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	119123446	119128260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119125271_119127374
ENSMUSG00000034216.13_119124112_119128935_1	chr2	+	2720	2	ISM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	4889	-1	4593	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCCCTCTTCCTAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	119124111	119128935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119125271_119127374
ENSMUSG00000034218.17_53351124_53399303_1	chr9	-	4408	33	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	45952	84	45952	-84	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAACTTGCTTATCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	53399303	53351123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368782_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205
ENSMUSG00000034218.17_53353761_53401465_1	chr9	-	4341	32	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	43790	2721	43790	-2721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGATATTGTGGACGGGA	NA	NA	NA	NA	NA	NA	NA	NA	53401465	53353760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368782_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410
ENSMUSG00000034218.17_53356675_53402341_1	chr9	-	4436	31	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	42914	5635	42914	-5635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACGCAGTGTGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	53402341	53356674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368782_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213
ENSMUSG00000034218.17_53359352_53403672_1	chr9	-	4436	31	NNC	ENSMUSG00000034218.17	novel	9207	62	NA	NA	41583	-8312	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCGGAAGGTTCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	53403672	53359351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368782_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382647_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540
ENSMUSG00000034218.17_53364665_53406039_1	chr9	-	4382	30	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	39216	13625	39216	-13625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGAAATTAAGGTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	53406039	53364664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368782_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911
ENSMUSG00000034218.17_53364878_53407222_1	chr9	-	4378	30	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	38033	13838	38033	-13838	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATCTTGGCAAACATGGA	NA	NA	NA	NA	NA	NA	NA	NA	53407222	53364877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368782_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151
ENSMUSG00000034218.17_53365717_53408525_1	chr9	-	4353	30	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	36730	14677	36730	-14677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATACTTTGTTCATTATA	NA	NA	NA	NA	NA	NA	NA	NA	53408525	53365716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368782_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432
ENSMUSG00000034218.17_53366058_53410216_1	chr9	-	4368	30	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	35039	15018	35039	-15018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACGGGAGGCCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	53410216	53366057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53366130_53367067_53367276_53367793_53368009_53368677_53368782_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156
ENSMUSG00000034218.17_53367068_53410498_1	chr9	-	4444	30	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	34757	16028	34757	-16028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTCTTACCCAACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	53410498	53367067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53367276_53367793_53368009_53368677_53368782_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421
ENSMUSG00000034218.17_53368722_53414373_1	chr9	-	4344	31	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	30882	17682	30882	-17682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAGAAAACCCTGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	53414373	53368721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53368782_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244
ENSMUSG00000034218.17_53370203_53415348_1	chr9	-	4358	31	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	29907	19163	29907	-19163	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCACAAGTATTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	53415348	53370202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245
ENSMUSG00000034218.17_53372247_53421538_1	chr9	-	4363	32	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	23717	21207	23717	-21207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTAGATTGCAGGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	53421538	53372246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462
ENSMUSG00000034218.17_53373834_53423048_1	chr9	-	4341	32	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	22207	22794	22207	-22794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAAGAAACAGAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	53423048	53373833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003
ENSMUSG00000034218.17_53375506_53423164_1	chr9	-	4352	31	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	22091	24466	22091	-24466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTACCAGGCGGCGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	53423164	53375505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003
ENSMUSG00000034218.17_53376396_53424481_1	chr9	-	4334	31	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	20774	25356	20774	-25356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGTAACTTACGACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	53424481	53376395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404
ENSMUSG00000034218.17_53376574_53426539_1	chr9	-	4348	31	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	18716	25534	18716	-25534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTATGGCTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	53426539	53376573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457
ENSMUSG00000034218.17_53382747_53427618_1	chr9	-	4351	30	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	17637	31707	17637	-31707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAAGGTGGCTCAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	53427618	53382746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504
ENSMUSG00000034218.17_53390948_53427876_1	chr9	-	4393	28	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	17379	39908	17379	-39908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTAGTTGTTTTAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	53427876	53390947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504
ENSMUSG00000034218.17_53391905_53429890_1	chr9	-	4339	28	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	15365	40865	15365	-40865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTCCAGTTATTAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	53429890	53391904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802
ENSMUSG00000034218.17_53393607_53431372_1	chr9	-	4348	28	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	13883	42567	13883	-42567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTATTTTAAGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	53431372	53393606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291
ENSMUSG00000034218.17_53393664_53431429_1	chr9	-	4348	28	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	13826	42624	13826	-42624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGACATCAGCGGATCCA	NA	NA	NA	NA	NA	NA	NA	NA	53431429	53393663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291
ENSMUSG00000034218.17_53395432_53433458_1	chr9	-	4346	28	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	11797	44392	11797	-44392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTCAGTGGACCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	53433458	53395431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291_53431456_53433347
ENSMUSG00000034218.17_53395479_53433536_1	chr9	-	4377	28	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	11719	44439	11719	-44439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGATGTGTCCTATACC	NA	NA	NA	NA	NA	NA	NA	NA	53433536	53395478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291_53431456_53433347
ENSMUSG00000034218.17_53398114_53435812_1	chr9	-	4431	27	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	9443	47074	9443	-47074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTAGTTTATTTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	53435812	53398113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291_53431456_53433347_53433587_53435646
ENSMUSG00000034218.17_53399226_53438561_1	chr9	-	4367	27	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	6694	48186	6694	-48186	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTTTCACTCTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	53438561	53399225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472
ENSMUSG00000034218.17_53399279_53438609_1	chr9	-	4362	27	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	6646	48239	6646	-48239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTTTAAGGACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	53438609	53399278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472
ENSMUSG00000034218.17_53401518_53445266_1	chr9	-	4380	28	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	-11	50478	0	-50478	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTGTTAGTTTATTACT	NA	NA	NA	NA	NA	NA	NA	NA	53445266	53401517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164
ENSMUSG00000034220.8_92759367_92785040_1	chr1	+	1369	6	ISM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	0	3461	0	-3461	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTGGCACTGCAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	92759366	92785040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92759820_92781068_92781228_92782579_92782969_92783628_92783795_92784708_92784840_92784969
ENSMUSG00000034220.8_92759691_92785752_1	chr1	+	1404	8	ISM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	324	2749	324	-2749	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCCGCCCAGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	92759690	92785752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92759820_92781068_92781228_92782579_92782969_92783628_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576
ENSMUSG00000034220.8_92781085_92786107_1	chr1	+	1313	8	ISM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	21718	2394	21718	-2394	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGGAGGGTCAGCAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	92781084	92786107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92781228_92782579_92782969_92783628_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
ENSMUSG00000034220.8_92781147_92786150_1	chr1	+	1294	8	ISM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	21780	2351	21780	-2351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCATGCCCTCCCCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	92781146	92786150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92781228_92782579_92782969_92783628_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
ENSMUSG00000034220.8_92781202_92786201_1	chr1	+	1290	8	ISM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	21835	2300	21835	-2300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCTGCCCAGAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	92781201	92786201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92781228_92782579_92782969_92783628_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
ENSMUSG00000034220.8_92782748_92786382_1	chr1	+	1277	7	ISM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	23381	2119	23381	-2119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGCTCTGAGTGCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	92782747	92786382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92782969_92783628_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
ENSMUSG00000034220.8_92782845_92786504_1	chr1	+	1302	7	ISM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	23478	1997	23478	-1997	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTATTTCAGGGACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	92782844	92786504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92782969_92783628_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
ENSMUSG00000034220.8_92783656_92786674_1	chr1	+	1321	6	ISM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	24289	1827	24289	-1827	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCTACCAGACCCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	92783655	92786674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
ENSMUSG00000034220.8_92783721_92786710_1	chr1	+	1292	6	ISM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	24354	1791	24354	-1791	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGGCCCATCCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	92783720	92786710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
ENSMUSG00000034220.8_92784754_92786822_1	chr1	+	1285	5	ISM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	25387	1679	25387	-1679	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGCAGCCAGGATCCC	NA	NA	NA	NA	NA	NA	NA	NA	92784753	92786822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
ENSMUSG00000034220.8_92784788_92786889_1	chr1	+	1318	5	ISM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	25421	1612	25421	-1612	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGTTCTCAAAAAAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	92784787	92786889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
ENSMUSG00000034220.8_92785042_92787015_1	chr1	+	1320	4	ISM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	25675	1486	25675	-1486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATGGGCTCACAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	92785041	92787015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92785090_92785193_92785328_92785576_92785753_92786053
ENSMUSG00000034220.8_92785296_92787142_1	chr1	+	1297	3	ISM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	25929	1359	25929	-1359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGAAACTTTAGCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	92785295	92787142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92785328_92785576_92785753_92786053
ENSMUSG00000034220.8_92785703_92787331_1	chr1	+	1328	2	ISM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	26336	1170	26336	-1170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGGAGAGGCTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	92785702	92787331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_92785753_92786053
ENSMUSG00000034235.18_20598980_20600480_1	chr14	-	815	2	ISM	ENSMUSG00000034235.18	ENST00000680396.1	5700	21	57494	-17	57494	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTCTTTTACTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	20600480	20598979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20599237_20599922
ENSMUSG00000034235.18_20599955_20611049_1	chr14	-	814	3	ISM	ENSMUSG00000034235.18	ENST00000680396.1	5700	21	46925	958	46925	-958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTGGAGCTACACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	20611049	20599954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20600529_20606329_20606434_20610913
ENSMUSG00000034235.18_20600004_20611129_1	chr14	-	845	3	ISM	ENSMUSG00000034235.18	ENST00000680396.1	5700	21	46845	1007	46845	-1007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGTGAGATTTCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	20611129	20600003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20600529_20606329_20606434_20610913
ENSMUSG00000034235.18_20600360_20611443_1	chr14	-	803	3	ISM	ENSMUSG00000034235.18	ENST00000680396.1	5700	21	46531	1363	46531	-1363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCTAACTATGCCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	20611443	20600359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20600529_20606329_20606434_20610913
ENSMUSG00000034235.18_20611591_20615041_1	chr14	-	826	2	ISM	ENSMUSG00000034235.18	ENST00000680396.1	5700	21	42933	12594	42933	-12594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTTGTCCGCTCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	20615041	20611590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20612311_20614935
ENSMUSG00000034235.18_20611666_20615102_1	chr14	-	812	2	ISM	ENSMUSG00000034235.18	ENST00000680396.1	5700	21	42872	12669	42872	-12669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGACTTCATTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	20615102	20611665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20612311_20614935
ENSMUSG00000034235.18_20612184_20626596_1	chr14	-	801	6	ISM	ENSMUSG00000034235.18	ENST00000680396.1	5700	21	31378	13187	31378	-13187	internal_fragment	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCATCCCAGAGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	20626596	20612183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540
ENSMUSG00000034235.18_20620399_20627355_1	chr14	-	804	4	ISM	ENSMUSG00000034235.18	ENST00000680396.1	5700	21	30619	21402	30619	-21402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGGAGAAGGAATTAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	20627355	20620398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20620484_20623835_20623970_20626540_20626773_20627002
ENSMUSG00000034235.18_20626589_20631627_1	chr14	-	797	4	ISM	ENSMUSG00000034235.18	ENST00000680396.1	5700	21	26347	27592	26347	-27592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCAGTTTGGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	20631627	20626588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20626773_20627002_20627381_20627522_20627655_20631524
ENSMUSG00000034235.18_20627141_20636174_1	chr14	-	819	5	ISM	ENSMUSG00000034235.18	ENST00000680396.1	5700	21	21800	28144	21800	-28144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATCCAGTTCTTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	20636174	20627140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20627381_20627522_20627655_20631524_20631696_20633389_20633559_20636067
ENSMUSG00000034235.18_20627522_20638507_1	chr14	-	877	6	ISM	ENSMUSG00000034235.18	ENST00000680396.1	5700	21	19467	28525	19467	-28525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATTTGCACTCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	20638507	20627521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20627655_20631524_20631696_20633389_20633559_20636067_20636218_20638142_20638290_20638400
ENSMUSG00000034235.18_20631614_20639524_1	chr14	-	820	7	ISM	ENSMUSG00000034235.18	ENST00000680396.1	5700	21	18450	32617	18450	-32617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCAGTCACTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	20639524	20631613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20631696_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441
ENSMUSG00000034235.18_20638228_20657376_1	chr14	-	820	7	ISM	ENSMUSG00000034235.18	ENST00000680396.1	5700	21	598	39231	598	-39231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTCTGGTTTGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	20657376	20638227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149
ENSMUSG00000034235.18_20654149_20657893_1	chr14	-	808	2	ISM	ENSMUSG00000034235.18	ENST00000680396.1	5700	21	81	55152	81	-55152	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTCCTGCATCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	20657893	20654148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20654213_20657149
ENSMUSG00000034239.15_103495338_103499779_1	chr11	-	148	2	FSM	ENSMUSG00000034239.15	ENST00000582111.2	148	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTTACAAATATAACTC	NA	NA	NA	NA	NA	NA	NA	NA	103499779	103495337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_103495410_103499703
ENSMUSG00000034239.15_103495338_103499779_2	chr11	-	144	2	ISM	ENSMUSG00000034239.15	ENSMUST00000167262.2	4576	14	5786	69935	0	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTTACAAATATAACTC	NA	NA	NA	NA	NA	NA	NA	NA	103499779	103495337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103495410_103499707
ENSMUSG00000034243.18_36719100_36735664_1	chr16	+	3906	5	ISM	ENSMUSG00000034243.18	ENSMUST00000039855.9	10847	21	12604	17783	12604	-17783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTGAGCTAGAGGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	36719099	36735664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233
ENSMUSG00000034243.18_36738370_36753329_1	chr16	+	3897	9	ISM	ENSMUSG00000034243.18	ENSMUST00000039855.9	10847	21	31874	118	31874	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGAACTGCTGGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	36738369	36753329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ENSMUSG00000034245.11_91134379_91150265_1	chr6	+	756	5	NNC	ENSMUSG00000034245.11	novel	2653	10	NA	NA	-4	18	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATACCTGCCCCCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	91134378	91150265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_91134528_91136147_91136244_91146376_91146474_91149146_91149326_91150030
ENSMUSG00000034245.11_91134482_91144862_1	chr6	+	341	4	ISM	ENSMUSG00000034245.11	ENST00000446613.6	996	8	99	5385	99	-4464	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTCTAAACCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	91134481	91144862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91134528_91136142_91136244_91142542_91142660_91144785
ENSMUSG00000034245.11_91134482_91149326_1	chr6	+	327	3	FSM	ENSMUSG00000034245.11	ENST00000405025.5	426	3	99	0	99	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTCCTAGCACAGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	91134481	91149326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_91134528_91136142_91136244_91149146
ENSMUSG00000034245.11_91134482_91150265_1	chr6	+	658	5	FSM	ENSMUSG00000034245.11	ENST00000404040.5	739	5	99	-18	99	18	multi-exon	FALSE	canonical	NA	NA	NA	NA	2062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATACCTGCCCCCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	91134481	91150265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_91134528_91136142_91136244_91146376_91146474_91149146_91149326_91150030
ENSMUSG00000034245.11_91134513_91150086_1	chr6	+	250	3	FSM	ENSMUSG00000034245.11	ENST00000402259.5	541	3	130	161	130	-161	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTCATGGTGACCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	91134512	91150086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_91134528_91149146_91149326_91150030
ENSMUSG00000034245.11_91136141_91145853_1	chr6	+	360	4	ISM	ENSMUSG00000034245.11	ENST00000446613.6	996	8	1758	4394	1758	-3473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCACTCTGCAGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	91136140	91145853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91136244_91142542_91142660_91144785_91144863_91145790
ENSMUSG00000034245.11_91142633_91149178_1	chr6	+	296	5	ISM	ENSMUSG00000034245.11	ENST00000446613.6	996	8	8250	1069	8250	-148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCACAGAAGATGAGGAATA	NA	NA	NA	NA	NA	NA	NA	NA	91142632	91149178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91142660_91144785_91144863_91145790_91145854_91146376_91146474_91149146
ENSMUSG00000034247.10_103257316_103258589_1	chr11	-	670	2	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	27552	-1	27552	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCTTCGCCCGACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	103258589	103257315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103257820_103258423
ENSMUSG00000034247.10_103257316_103258997_1	chr11	-	726	3	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	27144	-1	27144	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCTTCGCCCGACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	103258997	103257315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103257820_103258423_103258582_103258933
ENSMUSG00000034247.10_103257443_103261777_1	chr11	-	689	4	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	24364	126	24364	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTGAGCATTGCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	103261777	103257442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687
ENSMUSG00000034247.10_103257628_103264792_1	chr11	-	635	5	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	21349	311	21349	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGTGTGCCCAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	103264792	103257627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765
ENSMUSG00000034247.10_103257786_103267440_1	chr11	-	618	6	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	18701	469	18701	-469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGGCTGTGGTGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	103267440	103257785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418
ENSMUSG00000034247.10_103261747_103267764_1	chr11	-	627	3	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	18377	4430	18377	-4430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGGGACTACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	103267764	103261746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103261882_103264765_103264912_103267418
ENSMUSG00000034247.10_103264814_103267956_1	chr11	-	636	2	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	18185	7497	18185	-7497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTCCAGCCAGAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	103267956	103264813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103264912_103267418
ENSMUSG00000034247.10_103267847_103271013_1	chr11	-	647	2	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	15128	10530	15128	-10530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTGTATGCAGACCGGA	NA	NA	NA	NA	NA	NA	NA	NA	103271013	103267846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103268340_103270859
ENSMUSG00000034247.10_103267932_103271096_1	chr11	-	645	2	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	15045	10615	15045	-10615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCTGCGGGTGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	103271096	103267931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103268340_103270859
ENSMUSG00000034247.10_103267976_103271157_1	chr11	-	662	2	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	14984	10659	14984	-10659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTCCACCAGACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	103271157	103267975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103268340_103270859
ENSMUSG00000034247.10_103268122_103285664_1	chr11	-	688	3	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	477	10805	477	-10805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGAAGCTGGCTCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	103285664	103268121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103268340_103270859_103271179_103285513
ENSMUSG00000034247.10_103268197_103285715_1	chr11	-	664	3	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	426	10880	426	-10880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGCTGCTCCCTGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	103285715	103268196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103268340_103270859_103271179_103285513
ENSMUSG00000034247.10_103268266_103285757_1	chr11	-	637	3	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	384	10949	384	-10949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCTTTTGTGAGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	103285757	103268265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103268340_103270859_103271179_103285513
ENSMUSG00000034247.10_103270859_103286021_1	chr11	-	625	3	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	120	13542	120	-13542	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGACTGTAGAGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	103286021	103270858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103271179_103285513_103285800_103286002
ENSMUSG00000034247.10_103270912_103286074_1	chr11	-	625	3	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	67	13595	67	-13595	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGTGACACAAGACCATAA	NA	NA	NA	NA	NA	NA	NA	NA	103286074	103270911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103271179_103285513_103285800_103286002
ENSMUSG00000034247.10_103270962_103286131_1	chr11	-	632	3	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	10	13645	10	-13645	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCCAGCCCCAGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	103286131	103270961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_103271179_103285513_103285800_103286002
ENSMUSG00000034254.18_34824947_34831554_1	chr17	+	1209	7	FSM	ENSMUSG00000034254.18	ENSMUST00000037489.15	2190	7	112	869	112	-838	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTTGGACTCTCCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	34824946	34831554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_34825146_34829418_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226
ENSMUSG00000034254.18_34829537_34831960_1	chr17	+	1298	6	ISM	ENSMUSG00000034254.18	ENSMUST00000174595.2	1911	7	958	432	958	-432	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGTGCCAGGGCTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	34829536	34831960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226
ENSMUSG00000034254.18_34830317_34832201_1	chr17	+	1254	4	ISM	ENSMUSG00000034254.18	ENSMUST00000174595.2	1911	7	1738	191	1738	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCCGTCTCTGAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	34830316	34832201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34830424_34830578_34830675_34830764_34830841_34831226
ENSMUSG00000034254.18_34830630_34832392_1	chr17	+	1287	3	ISM	ENSMUSG00000034254.18	ENSMUST00000174595.2	1911	7	2051	0	2051	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGGTTCTCTGCGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	34830629	34832392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34830675_34830764_34830841_34831226
ENSMUSG00000034255.18_103223690_103230843_1	chr11	-	1552	14	FSM	ENSMUSG00000034255.18	ENST00000528384.5	1791	14	235	4	235	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGACCGTGGGTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	103230843	103223689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103224960_103225083_103225190_103226026_103226126_103228550_103228656_103229132_103229224_103229513_103229576_103229779_103229935_103230280_103230464_103230810
ENSMUSG00000034255.18_103223739_103230896_1	chr11	-	1556	14	FSM	ENSMUSG00000034255.18	ENST00000528384.5	1791	14	182	53	182	-53	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGAGCTCATCCTACAT	NA	NA	NA	NA	NA	NA	NA	NA	103230896	103223738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103224960_103225083_103225190_103226026_103226126_103228550_103228656_103229132_103229224_103229513_103229576_103229779_103229935_103230280_103230464_103230810
ENSMUSG00000034255.18_103223797_103230951_1	chr11	-	1553	14	FSM	ENSMUSG00000034255.18	ENST00000528384.5	1791	14	127	111	127	-111	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCGGCCAGAGATGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	103230951	103223796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103224960_103225083_103225190_103226026_103226126_103228550_103228656_103229132_103229224_103229513_103229576_103229779_103229935_103230280_103230464_103230810
ENSMUSG00000034259.9_76211597_76214517_1	chr15	+	1440	3	NNC	ENSMUSG00000034259.9	novel	1796	3	NA	NA	0	-360	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGCTCTGGCCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	76211596	76214517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76211868_76213229_76213437_76213555
ENSMUSG00000034259.9_76211665_76214517_1	chr15	+	1372	3	NNC	ENSMUSG00000034259.9	novel	1796	3	NA	NA	68	-360	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGCTCTGGCCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	76211664	76214517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76211868_76213229_76213437_76213555
ENSMUSG00000034259.9_76211665_76214517_2	chr15	+	1366	3	NNC	ENSMUSG00000034259.9	novel	1796	3	NA	NA	68	-360	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGCTCTGGCCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	76211664	76214517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76211868_76213229_76213431_76213555
ENSMUSG00000034259.9_76211665_76214621_1	chr15	+	1476	3	NNC	ENSMUSG00000034259.9	novel	1796	3	NA	NA	68	-256	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1059	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATTGGAGTTTCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	76211664	76214621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76211868_76213229_76213437_76213555
ENSMUSG00000034259.9_76213228_76214742_1	chr15	+	1390	2	NNC	ENSMUSG00000034259.9	novel	1796	3	NA	NA	1631	-135	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1069	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGTGTCCATCATTAAG	NA	NA	NA	NA	NA	NA	NA	NA	76213227	76214742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76213431_76213555
ENSMUSG00000034263.14_64868971_64871811_1	chr9	+	514	2	ISM	ENSMUSG00000034263.14	ENSMUST00000037504.7	2837	13	752	22179	752	-21596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACAGCGCTGGTGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	64868970	64871811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64869281_64871607
ENSMUSG00000034263.14_64871695_64889389_1	chr9	+	1097	8	NNC	ENSMUSG00000034263.14	novel	1468	10	NA	NA	35	-4018	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1087	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACAGTGCTTCCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	64871694	64889389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_64871886_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885421_64885564_64887056_64887191_64889270
ENSMUSG00000034263.14_64871695_64889389_2	chr9	+	1098	8	NNC	ENSMUSG00000034263.14	novel	1468	10	NA	NA	35	-4018	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACAGTGCTTCCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	64871694	64889389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_64871886_64879256_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270
ENSMUSG00000034263.14_64871695_64889389_3	chr9	+	1092	8	NNC	ENSMUSG00000034263.14	novel	1468	10	NA	NA	35	-4018	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	885	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACAGTGCTTCCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	64871694	64889389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_64871886_64879254_64879411_64879981_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270
ENSMUSG00000034263.14_64871756_64893154_1	chr9	+	1119	10	FSM	ENSMUSG00000034263.14	ENST00000442903.3	1468	10	96	253	96	-253	multi-exon	FALSE	canonical	NA	NA	NA	NA	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAAAGCTGCCTTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	64871755	64893154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_64871886_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ENSMUSG00000034263.14_64871833_64893183_1	chr9	+	1071	10	FSM	ENSMUSG00000034263.14	ENST00000442903.3	1468	10	173	224	173	-224	multi-exon	FALSE	canonical	NA	NA	NA	NA	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACCTGCTTAAAGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	64871832	64893183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_64871886_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ENSMUSG00000034263.14_64871859_64893271_1	chr9	+	1133	10	FSM	ENSMUSG00000034263.14	ENST00000442903.3	1468	10	199	136	199	-136	multi-exon	FALSE	canonical	NA	NA	NA	NA	1880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCACGCTGCCCAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	64871858	64893271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_64871886_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ENSMUSG00000034263.14_64879325_64893320_1	chr9	+	1085	9	ISM	ENSMUSG00000034263.14	ENST00000442903.3	1468	10	7665	87	7665	-87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGACCACAACATCACACC	NA	NA	NA	NA	NA	NA	NA	NA	64879324	64893320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ENSMUSG00000034263.14_64879329_64893300_1	chr9	+	1052	9	NNC	ENSMUSG00000034263.14	novel	1468	10	NA	NA	7669	-107	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCACTGAGTATGCCATA	NA	NA	NA	NA	NA	NA	NA	NA	64879328	64893300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889279_64889390_64891259_64891326_64893140
ENSMUSG00000034265.9_5542832_5736088_1	chr17	+	1455	3	ISM	ENSMUSG00000034265.9	ENST00000414563.6	2342	9	0	67303	0	-67303	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAGGACCCGGGATAC	NA	NA	NA	NA	NA	NA	NA	NA	5542831	5736088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5543967_5698177_5698339_5735929
ENSMUSG00000034265.9_5543065_5765304_1	chr17	+	1421	5	ISM	ENSMUSG00000034265.9	ENST00000359775.10	2331	9	177	38087	177	-38087	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCCAGGGGGGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	5543064	5765304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243
ENSMUSG00000034265.9_5543325_5781773_1	chr17	+	1393	8	ISM	ENSMUSG00000034265.9	ENST00000359775.10	2331	9	437	21618	437	-21618	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCGACACACCACAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	5543324	5781773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243_5765305_5775509_5775605_5777099_5777210_5781746
ENSMUSG00000034265.9_5543370_5781809_1	chr17	+	1378	8	NNC	ENSMUSG00000034265.9	novel	2342	9	NA	NA	482	-21582	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCACTATGTATGGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	5543369	5781809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_5543967_5698177_5698339_5735935_5736089_5762662_5762801_5765243_5765305_5775509_5775605_5777099_5777210_5781746
ENSMUSG00000034265.9_5543387_5781814_1	chr17	+	1372	8	ISM	ENSMUSG00000034265.9	ENST00000359775.10	2331	9	499	21577	499	-21577	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTATGGGGCCACACAG	NA	NA	NA	NA	NA	NA	NA	NA	5543386	5781814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243_5765305_5775509_5775605_5777099_5777210_5781746
ENSMUSG00000034265.9_5543461_5781842_1	chr17	+	1326	8	ISM	ENSMUSG00000034265.9	ENST00000359775.10	2331	9	573	21549	573	-21549	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGGTAGGTACTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	5543460	5781842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243_5765305_5775509_5775605_5777099_5777210_5781746
ENSMUSG00000034265.9_5543588_5803125_1	chr17	+	1365	9	FSM	ENSMUSG00000034265.9	ENST00000359775.10	2331	9	700	266	700	-266	multi-exon	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCACCCTCCTCCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	5543587	5803125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243_5765305_5775509_5775605_5777099_5777210_5781746_5781850_5802966
ENSMUSG00000034265.9_5543736_5803272_1	chr17	+	1364	9	FSM	ENSMUSG00000034265.9	ENST00000359775.10	2331	9	848	119	848	-119	multi-exon	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATAGCCGTACCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	5543735	5803272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243_5765305_5775509_5775605_5777099_5777210_5781746_5781850_5802966
ENSMUSG00000034265.9_5543740_5803273_1	chr17	+	1361	9	FSM	ENSMUSG00000034265.9	ENST00000359775.10	2331	9	852	118	852	-118	multi-exon	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATAGCCGTACCATGCAC	NA	NA	NA	NA	NA	NA	NA	NA	5543739	5803273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243_5765305_5775509_5775605_5777099_5777210_5781746_5781850_5802966
ENSMUSG00000034265.9_5543772_5803301_1	chr17	+	1357	9	FSM	ENSMUSG00000034265.9	ENST00000359775.10	2331	9	884	90	884	-90	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCAGCCAGGACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	5543771	5803301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243_5765305_5775509_5775605_5777099_5777210_5781746_5781850_5802966
ENSMUSG00000034265.9_5543793_5803322_1	chr17	+	1357	9	FSM	ENSMUSG00000034265.9	ENST00000359775.10	2331	9	905	69	905	-69	multi-exon	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACGAAGACTCCGTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	5543792	5803322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243_5765305_5775509_5775605_5777099_5777210_5781746_5781850_5802966
ENSMUSG00000034265.9_5543841_5803375_1	chr17	+	1362	9	FSM	ENSMUSG00000034265.9	ENST00000359775.10	2331	9	953	16	953	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGCCCTGGGGACCACA	NA	NA	NA	NA	NA	NA	NA	NA	5543840	5803375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243_5765305_5775509_5775605_5777099_5777210_5781746_5781850_5802966
ENSMUSG00000034265.9_5543860_5803391_1	chr17	+	1359	9	FSM	ENSMUSG00000034265.9	ENST00000359775.10	2331	9	972	0	972	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAGGTGACAAACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	5543859	5803391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243_5765305_5775509_5775605_5777099_5777210_5781746_5781850_5802966
ENSMUSG00000034271.17_85645948_85685974_1	chr12	+	805	4	NNC	ENSMUSG00000034271.17	novel	830	4	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCCACTCCAGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	85645947	85685974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_85645996_85654915_85655140_85678418_85678524_85685546
ENSMUSG00000034271.17_85645948_85685974_2	chr12	+	807	4	NNC	ENSMUSG00000034271.17	novel	830	4	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCCACTCCAGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	85645947	85685974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_85646002_85654919_85655140_85678418_85678524_85685546
ENSMUSG00000034271.17_85645948_85685974_3	chr12	+	811	4	FSM	ENSMUSG00000034271.17	ENST00000419727.6	830	4	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCCACTCCAGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	85645947	85685974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_85646002_85654915_85655140_85678418_85678524_85685546
ENSMUSG00000034274.12_4849830_4864561_1	chr11	+	987	10	ISM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	4487	14304	4487	-14304	internal_fragment	TRUE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCGCAAGGAGATGCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	4849829	4864561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521
ENSMUSG00000034274.12_4851149_4865597_1	chr11	+	1082	10	ISM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	5806	13268	5806	-13268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGGGATGGGAGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	4851148	4865597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488
ENSMUSG00000034274.12_4852085_4868225_1	chr11	+	1038	10	ISM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	6742	10640	6742	-10640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAAGCGTGTGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	4852084	4868225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123
ENSMUSG00000034274.12_4852333_4869829_1	chr11	+	1022	10	ISM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	6990	9036	6990	-9036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTATTCTGACCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	4852332	4869829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732
ENSMUSG00000034274.12_4854095_4870491_1	chr11	+	1037	10	ISM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	8752	8374	8752	-8374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTGGGGCAGGGACTA	NA	NA	NA	NA	NA	NA	NA	NA	4854094	4870491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376
ENSMUSG00000034274.12_4854196_4871954_1	chr11	+	969	11	ISM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	8853	6911	8853	-6911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACCTCTTCCCTGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	4854195	4871954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921
ENSMUSG00000034274.12_4860682_4874821_1	chr11	+	986	11	ISM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	15339	4044	15339	-4044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAAGGGGAGAAAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	4860681	4874821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747
ENSMUSG00000034274.12_4862801_4876069_1	chr11	+	954	11	ISM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	17458	2796	17458	-2796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATAAGGAGTTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	4862800	4876069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045
ENSMUSG00000034274.12_4864582_4878724_1	chr11	+	1012	10	ISM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	19239	141	19239	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCACCGCTGACTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	4864581	4878724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ENSMUSG00000034274.12_4865519_4878762_1	chr11	+	980	9	ISM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	20176	103	20176	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTGTCCTGGCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4865518	4878762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ENSMUSG00000034274.12_4865545_4878865_1	chr11	+	1057	9	ISM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	20202	0	20202	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGTTTGTAGCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	4865544	4878865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ENSMUSG00000034274.12_4868119_4878865_1	chr11	+	1009	8	ISM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	22776	0	22776	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGTTTGTAGCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	4868118	4878865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ENSMUSG00000034278.4_119002981_119016879_1	chr2	-	883	10	ISM	ENSMUSG00000034278.4	ENSMUST00000038439.4	1008	11	22397	0	22397	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTACTTTTCTTCCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	119016879	119002980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011451_119014079_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826
ENSMUSG00000034278.4_119003140_119039263_1	chr2	-	836	11	FSM	ENSMUSG00000034278.4	ENSMUST00000038439.4	1008	11	13	159	13	-159	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTCTCGTCATGATGCG	NA	NA	NA	NA	NA	NA	NA	NA	119039263	119003139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011451_119014079_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
ENSMUSG00000034282.4_116113788_116117842_1	chr11	-	1556	5	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	11013	2183	11013	-2183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGAAGCGGGAAAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	116117842	116113787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116115028_116115893_116115987_116116087_116116199_116116309_116116394_116117814
ENSMUSG00000034282.4_116113835_116117908_1	chr11	-	1575	5	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	10947	2230	10947	-2230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCGCTCTCAGGAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	116117908	116113834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116115028_116115893_116115987_116116087_116116199_116116309_116116394_116117814
ENSMUSG00000034282.4_116113995_116118468_1	chr11	-	1557	6	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	10387	2390	10387	-2390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGAAGCTGCTGCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	116118468	116113994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116115028_116115893_116115987_116116087_116116199_116116309_116116394_116117814_116117966_116118383
ENSMUSG00000034282.4_116114269_116118915_1	chr11	-	1562	8	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	9940	2664	9940	-2664	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGGTAGAGCAGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	116118915	116114268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116115028_116115893_116115987_116116087_116116199_116116309_116116394_116117814_116117966_116118383_116118578_116118667_116118807_116118884
ENSMUSG00000034282.4_116114312_116118973_1	chr11	-	1577	8	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	9882	2707	9882	-2707	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGATCAGCTCAGTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	116118973	116114311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116115028_116115893_116115987_116116087_116116199_116116309_116116394_116117814_116117966_116118383_116118578_116118667_116118807_116118884
ENSMUSG00000034282.4_116114376_116119023_1	chr11	-	1563	8	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	9832	2771	9832	-2771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGGAGGAAGGGGGCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	116119023	116114375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116115028_116115893_116115987_116116087_116116199_116116309_116116394_116117814_116117966_116118383_116118578_116118667_116118807_116118884
ENSMUSG00000034282.4_116114497_116120302_1	chr11	-	1558	9	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	8553	2892	8553	-2892	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAGAAGGAGATGAACGT	NA	NA	NA	NA	NA	NA	NA	NA	116120302	116114496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116115028_116115893_116115987_116116087_116116199_116116309_116116394_116117814_116117966_116118383_116118578_116118667_116118807_116118884_116119064_116120226
ENSMUSG00000034282.4_116114630_116120573_1	chr11	-	1591	10	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	8282	3025	8282	-3025	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCAAATCGAGAGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	116120573	116114629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116115028_116115893_116115987_116116087_116116199_116116309_116116394_116117814_116117966_116118383_116118578_116118667_116118807_116118884_116119064_116120226_116120415_116120519
ENSMUSG00000034282.4_116114767_116120819_1	chr11	-	1574	11	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	8036	3162	8036	-3162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCAGCATCCCGGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	116120819	116114766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116115028_116115893_116115987_116116087_116116199_116116309_116116394_116117814_116117966_116118383_116118578_116118667_116118807_116118884_116119064_116120226_116120415_116120519_116120669_116120794
ENSMUSG00000034282.4_116114832_116120886_1	chr11	-	1576	11	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	7969	3227	7969	-3227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCGGCTGGAGGAGAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	116120886	116114831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116115028_116115893_116115987_116116087_116116199_116116309_116116394_116117814_116117966_116118383_116118578_116118667_116118807_116118884_116119064_116120226_116120415_116120519_116120669_116120794
ENSMUSG00000034282.4_116114985_116121314_1	chr11	-	1559	12	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	7541	3380	7541	-3380	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGATCTGGGAGTCCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	116121314	116114984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116115028_116115893_116115987_116116087_116116199_116116309_116116394_116117814_116117966_116118383_116118578_116118667_116118807_116118884_116119064_116120226_116120415_116120519_116120669_116120794_116120950_116121241
ENSMUSG00000034282.4_116116146_116121852_1	chr11	-	1548	11	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	7003	4541	7003	-4541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCCGCCCCGAAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	116121852	116116145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116116199_116116309_116116394_116117814_116117966_116118383_116118578_116118667_116118807_116118884_116119064_116120226_116120415_116120519_116120669_116120794_116120950_116121241_116121389_116121743
ENSMUSG00000034282.4_116116343_116123299_1	chr11	-	1559	11	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	5556	4738	5556	-4738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTCACCCGGGACCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	116123299	116116342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116116394_116117814_116117966_116118383_116118578_116118667_116118807_116118884_116119064_116120226_116120415_116120519_116120669_116120794_116120950_116121241_116121389_116121743_116121870_116123219
ENSMUSG00000034282.4_116117837_116123513_1	chr11	-	1560	11	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	5342	6232	5342	5389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAAGCTGCAAGCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	116123513	116117836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116117966_116118383_116118578_116118667_116118807_116118884_116119064_116120226_116120415_116120519_116120669_116120794_116120950_116121241_116121389_116121743_116121870_116123219_116123316_116123455
ENSMUSG00000034282.4_116117941_116123708_1	chr11	-	1564	12	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	5147	6336	5147	5285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACCTACCAGCAGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	116123708	116117940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116117966_116118383_116118578_116118667_116118807_116118884_116119064_116120226_116120415_116120519_116120669_116120794_116120950_116121241_116121389_116121743_116121870_116123219_116123316_116123455_116123564_116123650
ENSMUSG00000034282.4_116118500_116123813_1	chr11	-	1528	11	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	5042	6895	5042	4726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGTGCGCTGCAGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	116123813	116118499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116118578_116118667_116118807_116118884_116119064_116120226_116120415_116120519_116120669_116120794_116120950_116121241_116121389_116121743_116121870_116123219_116123316_116123455_116123564_116123650
ENSMUSG00000034282.4_116118668_116124340_1	chr11	-	1617	12	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	4515	7063	4515	4558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGTTCCTGAGAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	116124340	116118667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116118807_116118884_116119064_116120226_116120415_116120519_116120669_116120794_116120950_116121241_116121389_116121743_116121870_116123219_116123316_116123455_116123564_116123650_116123813_116123929_116123969_116124211
ENSMUSG00000034282.4_116119002_116125272_1	chr11	-	1563	13	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	3583	7397	3583	4224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTTTCTGTCTACCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	116125272	116119001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116119064_116120226_116120415_116120519_116120669_116120794_116120950_116121241_116121389_116121743_116121870_116123219_116123316_116123455_116123564_116123650_116123813_116123929_116123969_116124211_116124338_116124980_116125108_116125194
ENSMUSG00000034282.4_116120298_116125826_1	chr11	-	1576	13	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	3029	8693	3029	2928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCCCGGAGCCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	116125826	116120297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116120415_116120519_116120669_116120794_116120950_116121241_116121389_116121743_116121870_116123219_116123316_116123455_116123564_116123650_116123813_116123929_116123969_116124211_116124338_116124980_116125108_116125194_116125350_116125757
ENSMUSG00000034282.4_116120522_116128903_1	chr11	-	1666	13	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	-48	8917	0	2704	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTCCATCTAGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	116128903	116120521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116120669_116120794_116120950_116121241_116121389_116121743_116121870_116123219_116123316_116123455_116123564_116123650_116123813_116123929_116123969_116124211_116124338_116124980_116125108_116125194_116125350_116125757_116125858_116128725
ENSMUSG00000034282.4_116123267_116124240_1	chr11	-	372	4	ISM	ENSMUSG00000034282.4	ENST00000399134.5	1070	8	4663	41	4615	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGTCAGGAGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	116124240	116123266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116123316_116123455_116123564_116123650_116123813_116124187
ENSMUSG00000034282.4_116123545_116125018_1	chr11	-	369	4	ISM	ENSMUSG00000034282.4	ENST00000399134.5	1070	8	3885	319	3837	-319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGCCCAGGAGCGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	116125018	116123544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116123564_116123650_116123813_116124187_116124338_116124980
ENSMUSG00000034282.4_116123765_116125233_1	chr11	-	364	4	ISM	ENSMUSG00000034282.4	ENST00000399134.5	1070	8	3670	539	3622	-539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAAGGCTGCACGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	116125233	116123764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_116123813_116124187_116124338_116124980_116125108_116125194
ENSMUSG00000034285.16_4824005_4843323_1	chr11	+	995	10	FSM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	54	877	54	-877	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGAGAACTTAGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	4824004	4843323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ENSMUSG00000034285.16_4824005_4843378_1	chr11	+	1050	10	FSM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	54	822	54	-822	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGTTCTTAACTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	4824004	4843378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ENSMUSG00000034285.16_4833445_4843617_1	chr11	+	1113	9	ISM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	9494	583	9494	-583	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAATAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	4833444	4843617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ENSMUSG00000034285.16_4839148_4843827_1	chr11	+	1009	5	ISM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	15197	373	15197	-373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAGAATTGGGAAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	4839147	4843827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ENSMUSG00000034290.10_85347903_85350314_1	chr12	-	872	2	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	35822	1615	35689	-1615	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCAGTACAGGGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	85350314	85347902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85348701_85350240
ENSMUSG00000034290.10_85347978_85350404_1	chr12	-	887	2	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	35732	1690	35599	-1690	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTGGATGTTTGAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	85350404	85347977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85348701_85350240
ENSMUSG00000034290.10_85348086_85352307_1	chr12	-	893	3	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	33829	1798	33696	-1798	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGAGTCCAAGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	85352307	85348085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85348701_85350240_85350448_85352236
ENSMUSG00000034290.10_85348266_85353010_1	chr12	-	904	4	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	33126	1978	32993	-1978	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTTAACTGCACTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	85353010	85348265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910
ENSMUSG00000034290.10_85348517_85355723_1	chr12	-	974	6	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	30413	2229	30280	-2229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGCAGAGAGCAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	85355723	85348516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592
ENSMUSG00000034290.10_85348630_85357219_1	chr12	-	960	7	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	28917	2342	28784	-2342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGAGTCCTGGTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	85357219	85348629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160
ENSMUSG00000034290.10_85350321_85358180_1	chr12	-	981	7	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	27956	4033	27823	-4033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGAAGCTCCAGCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	85358180	85350320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111
ENSMUSG00000034290.10_85352237_85359875_1	chr12	-	1050	7	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	26261	5949	26128	-5949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGACAGTGGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	85359875	85352236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719
ENSMUSG00000034290.10_85352919_85361202_1	chr12	-	954	8	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	24934	6631	24801	-6631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGAAGGTAATGCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	85361202	85352918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175
ENSMUSG00000034290.10_85352981_85361248_1	chr12	-	938	8	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	24888	6693	24755	-6693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTCCCACGGAGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	85361248	85352980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175
ENSMUSG00000034290.10_85353044_85361326_1	chr12	-	953	8	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	24810	6756	24677	-6756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCCAGATCCAAGCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	85361326	85353043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175
ENSMUSG00000034290.10_85353094_85361230_1	chr12	-	840	8	ISM	ENSMUSG00000034290.10	ENST00000678037.1	5568	22	24773	7088	24773	-6806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCGGCGGCGGCGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	85361230	85353093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361142
ENSMUSG00000034290.10_85355593_85361379_1	chr12	-	882	6	ISM	ENSMUSG00000034290.10	ENST00000678037.1	5568	22	24624	9587	24624	-9305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGTTTCATCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	85361379	85355592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361142
ENSMUSG00000034290.10_85355690_85367552_1	chr12	-	959	8	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	18584	9402	18451	-9402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATATCTGTACCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	85367552	85355689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487
ENSMUSG00000034290.10_85355704_85362410_1	chr12	-	825	7	ISM	ENSMUSG00000034290.10	ENST00000678037.1	5568	22	23593	9698	23593	-9416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACCACATGGCTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	85362410	85355703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361142_85361377_85362353
ENSMUSG00000034290.10_85357264_85367542_1	chr12	-	805	7	ISM	ENSMUSG00000034290.10	ENST00000678037.1	5568	22	18461	11258	18461	-10976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGAAACGCCTGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	85367542	85357263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361142_85361377_85362353_85362499_85367487
ENSMUSG00000034290.10_85357288_85367621_1	chr12	-	860	7	ISM	ENSMUSG00000034290.10	ENST00000678037.1	5568	22	18382	11282	18382	-11000	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGCAGCTGGGTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	85367621	85357287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361142_85361377_85362353_85362499_85367487
ENSMUSG00000034290.10_85359719_85372148_1	chr12	-	894	7	ISM	ENSMUSG00000034290.10	ENST00000678037.1	5568	22	13855	13713	13855	-13431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCCCTTGAGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	85372148	85359718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85359876_85360955_85361003_85361142_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081
ENSMUSG00000034290.10_85359800_85376703_1	chr12	-	975	9	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	9433	13512	9300	-13512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGTGCTGGCCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	85376703	85359799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617
ENSMUSG00000034290.10_85359845_85374215_1	chr12	-	819	8	ISM	ENSMUSG00000034290.10	ENST00000678037.1	5568	22	11788	13839	11788	-13557	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCAATGTGGCTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	85374215	85359844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85359876_85360955_85361003_85361142_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162
ENSMUSG00000034290.10_85361259_85380824_1	chr12	-	986	9	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	5312	14971	5179	-14971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCAGGTCTCCTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	85380824	85361258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759
ENSMUSG00000034290.10_85362357_85383188_1	chr12	-	1034	10	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	2948	16069	2815	-16069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTAAGCCACGCATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	85383188	85362356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081
ENSMUSG00000034290.10_85367550_85385821_1	chr12	-	946	10	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	315	21262	182	-21262	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCGGGGAACACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	85385821	85367549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
ENSMUSG00000034290.10_85367601_85385871_1	chr12	-	945	10	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	265	21313	132	-21313	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACACCTCAGAAATTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	85385871	85367600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
ENSMUSG00000034295.11_24842668_25189365_1	chr18	+	1368	12	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	2	76918	2	-76918	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGGCAGCAGAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	24842667	25189365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161121_25161244_25189316
ENSMUSG00000034295.11_24842789_25199303_1	chr18	+	1363	13	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	123	66980	123	-66980	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGCAGGAGAAGGAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	24842788	25199303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161121_25161244_25189316_25189452_25199273
ENSMUSG00000034295.11_25030727_25218468_1	chr18	+	1373	11	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	188061	47815	188061	-47815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCCACAGGGGAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	25030726	25218468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161121_25161244_25189316_25189452_25199273_25199483_25218390
ENSMUSG00000034295.11_25037035_25218583_1	chr18	+	1368	10	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	194369	47700	194369	-47700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCTGCTTCCAGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	25037034	25218583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161121_25161244_25189316_25189452_25199273_25199483_25218390
ENSMUSG00000034295.11_25118301_25223171_1	chr18	+	1393	9	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	275635	43112	275635	-43112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTATGCCCATAACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	25118300	25223171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161121_25161244_25189316_25189452_25199273_25199483_25218390_25218670_25223086
ENSMUSG00000034295.11_25127559_25223403_1	chr18	+	1362	7	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	284893	42880	284893	-42880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTGCCATCTCTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	25127558	25223403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25127617_25134847_25135090_25161121_25161244_25189316_25189452_25199273_25199483_25218390_25218670_25223086
ENSMUSG00000034295.11_25134908_25223522_1	chr18	+	1363	6	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	292242	42761	292242	-42761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATCCAAGACATGGATT	NA	NA	NA	NA	NA	NA	NA	NA	25134907	25223522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25135090_25161121_25161244_25189316_25189452_25199273_25199483_25218390_25218670_25223086
ENSMUSG00000034295.11_25134974_25223582_1	chr18	+	1357	6	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	292308	42701	292308	-42701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATCTTGGCCACCGGG	NA	NA	NA	NA	NA	NA	NA	NA	25134973	25223582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25135090_25161121_25161244_25189316_25189452_25199273_25199483_25218390_25218670_25223086
ENSMUSG00000034295.11_25161147_25223725_1	chr18	+	1359	5	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	318481	42558	318481	-42558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCAACACTCCTCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	25161146	25223725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25161244_25189316_25189452_25199273_25199483_25218390_25218670_25223086
ENSMUSG00000034295.11_25161206_25223785_1	chr18	+	1360	5	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	318540	42498	318540	-42498	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAGAAAAAGAAGACGATC	NA	NA	NA	NA	NA	NA	NA	NA	25161205	25223785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25161244_25189316_25189452_25199273_25199483_25218390_25218670_25223086
ENSMUSG00000034295.11_25189408_25223913_1	chr18	+	1359	4	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	346742	42370	346742	-42370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCGAGCACCTGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	25189407	25223913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25189452_25199273_25199483_25218390_25218670_25223086
ENSMUSG00000034295.11_25199340_25234651_1	chr18	+	1369	4	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	356674	31632	356674	-31632	internal_fragment	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGCCTGACGGTGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	25199339	25234651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25199483_25218390_25218670_25223086_25223965_25234582
ENSMUSG00000034295.11_25199407_25234695_1	chr18	+	1346	4	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	356741	31588	356741	-31588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGAACTTTGATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	25199406	25234695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25199483_25218390_25218670_25223086_25223965_25234582
ENSMUSG00000034295.11_25218535_25245616_1	chr18	+	1369	5	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	375869	20667	375869	-20667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTGGACCTGAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	25218534	25245616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602
ENSMUSG00000034295.11_25218591_25245661_1	chr18	+	1358	5	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	375925	20622	375925	-20622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGGGCTTCATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	25218590	25245661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602
ENSMUSG00000034295.11_25218637_25245722_1	chr18	+	1373	5	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	375971	20561	375971	-20561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACTTTCCAGTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	25218636	25245722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602
ENSMUSG00000034295.11_25223128_25246655_1	chr18	+	1388	5	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	380462	19628	380462	-19628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTAGTGGAAAACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	25223127	25246655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566
ENSMUSG00000034295.11_25223293_25248827_1	chr18	+	1368	6	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	380627	17456	380627	-17456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGCGATTGCAAAACACGA	NA	NA	NA	NA	NA	NA	NA	NA	25223292	25248827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755
ENSMUSG00000034295.11_25223439_25253213_1	chr18	+	1379	7	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	380773	13070	380773	-13070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAATTCGAGAGGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	25223438	25253213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175
ENSMUSG00000034295.11_25223488_25253291_1	chr18	+	1408	7	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	380822	12992	380822	-12992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGGTTCTACAGCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	25223487	25253291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175
ENSMUSG00000034295.11_25223570_25253324_1	chr18	+	1359	7	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	380904	12959	380904	-12959	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCACAGAGAGAGAAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	25223569	25253324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175
ENSMUSG00000034295.11_25223685_25258854_1	chr18	+	1343	8	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	381019	7429	381019	-7429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATGCTGAGGATGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	25223684	25258854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799
ENSMUSG00000034295.11_25223724_25258918_1	chr18	+	1368	8	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	381058	7365	381058	-7365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGGACGCCACCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	25223723	25258918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799
ENSMUSG00000034295.11_25223830_25263613_1	chr18	+	1342	9	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	381164	2670	381164	-2670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGAGGAGTCACCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	25223829	25263613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589
ENSMUSG00000034295.11_25223875_25263751_1	chr18	+	1435	9	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	381209	2532	381209	-2532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACATTTTGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	25223874	25263751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589
ENSMUSG00000034295.11_25223929_25263751_1	chr18	+	1381	9	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	381263	2532	381263	-2532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACATTTTGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	25223928	25263751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589
ENSMUSG00000034295.11_25234579_25265991_1	chr18	+	1373	9	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	391913	292	391913	-292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTCCAGAAGAAGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	25234578	25265991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ENSMUSG00000034295.11_25234646_25266041_1	chr18	+	1356	9	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	391980	242	391980	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTGACTTTTGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	25234645	25266041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ENSMUSG00000034295.11_25234671_25266123_1	chr18	+	1413	9	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	392005	160	392005	-160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGACTTGACCTGAACAT	NA	NA	NA	NA	NA	NA	NA	NA	25234670	25266123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ENSMUSG00000034295.11_25243216_25266244_1	chr18	+	1359	8	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	400550	39	400550	-39	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGCTGTGTTTCTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	25243215	25266244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ENSMUSG00000034311.4_99670123_99681995_1	chrX	+	577	5	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	63	88883	63	-88825	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATCTCGATCTCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	99670122	99681995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889
ENSMUSG00000034311.4_99670366_99682332_1	chrX	+	560	5	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	306	88546	306	-88488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGACAGAAGAAAACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	99670365	99682332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282
ENSMUSG00000034311.4_99679291_99709365_1	chrX	+	558	5	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	9231	61513	9231	-61455	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATGCTGACAGAGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	99679290	99709365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278
ENSMUSG00000034311.4_99681995_99720933_1	chrX	+	553	6	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	11935	49945	11935	-49887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTCTCTGGTGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	99681994	99720933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892
ENSMUSG00000034311.4_99708410_99723665_1	chrX	+	530	6	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	38350	47213	38350	-47155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAACATAGAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	99708409	99723665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614
ENSMUSG00000034311.4_99709401_99734216_1	chrX	+	568	7	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	39341	36662	39341	-36604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGCACTTGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	99709400	99734216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119
ENSMUSG00000034311.4_99720944_99738534_1	chrX	+	548	6	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	50884	32344	50884	-32286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTCTTGAACTTCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	99720943	99738534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476
ENSMUSG00000034311.4_99723469_99739674_1	chrX	+	566	6	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	53409	31204	53409	-31146	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACAGTCCAAACTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	99723468	99739674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603
ENSMUSG00000034311.4_99734226_99748454_1	chrX	+	583	6	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	64166	22424	64166	-22366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACGCAAAGAGACTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	99734225	99748454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395
ENSMUSG00000034311.4_99738543_99755455_1	chrX	+	550	6	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	68483	15423	68483	-15365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGGCCTTCTTGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	99738542	99755455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397
ENSMUSG00000034311.4_99741081_99757519_1	chrX	+	558	6	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	71021	13359	71021	-13301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGCTGAAAGTGAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	99741080	99757519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483
ENSMUSG00000034311.4_99748430_99759267_1	chrX	+	548	5	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	78370	11611	78370	-11553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGTTTGAGGAGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	99748429	99759267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186
ENSMUSG00000034311.4_99755462_99759936_1	chrX	+	554	5	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	85402	10942	85402	-10884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTTAGTGAAAAGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	99755461	99759936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876
ENSMUSG00000034311.4_99755733_99761567_1	chrX	+	548	6	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	85673	9311	85673	-9253	internal_fragment	TRUE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAACAGAAACCCCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	99755732	99761567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542
ENSMUSG00000034311.4_99757554_99762130_1	chrX	+	547	6	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	87494	8748	87494	-8690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCAAAGCTTCGCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	99757553	99762130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099
ENSMUSG00000034311.4_99759313_99768305_1	chrX	+	565	6	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	89253	2573	89253	-2515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTAATGTGTCCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	99759312	99768305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247
ENSMUSG00000034311.4_99759930_99769771_1	chrX	+	563	6	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	89870	1107	89870	-1049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTTTCAAACTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	99759929	99769771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768374_99769743
ENSMUSG00000034311.4_99761581_99770145_1	chrX	+	558	5	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	91521	733	91521	-675	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTATAGCGTCAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	99761580	99770145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99761642_99762099_99762277_99768247_99768374_99769743_99769857_99770064
ENSMUSG00000034311.4_99768283_99770415_1	chrX	+	555	3	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	98223	463	98223	-405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGCCTTTACTATCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	99768282	99770415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99768374_99769743_99769857_99770064
ENSMUSG00000034311.4_99768328_99770477_1	chrX	+	572	3	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	98268	401	98268	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTACTGGAGAGAGAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	99768327	99770477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99768374_99769743_99769857_99770064
ENSMUSG00000034312.16_90637963_90666943_1	chr6	-	1662	11	NNC	ENSMUSG00000034312.16	novel	3040	13	NA	NA	4885	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGGACCCGAGGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	90666943	90637962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_90638008_90641003_90641049_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648928_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561
ENSMUSG00000034312.16_90637963_90666959_1	chr6	-	1683	11	ISM	ENSMUSG00000034312.16	ENST00000273221.8	3040	13	26392	54	4869	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGGACCCGAGGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	90666959	90637962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_90638008_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648928_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561
ENSMUSG00000034312.16_90637963_90667004_1	chr6	-	1728	11	ISM	ENSMUSG00000034312.16	ENST00000273221.8	3040	13	26347	54	4824	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGGACCCGAGGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	90667004	90637962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_90638008_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648928_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561
ENSMUSG00000034312.16_90641004_90667690_1	chr6	-	2369	10	ISM	ENSMUSG00000034312.16	ENST00000273221.8	3040	13	25661	3095	4138	-1573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2562	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAGGAAGCACCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	90667690	90641003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648928_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561
ENSMUSG00000034312.16_90644931_90671678_1	chr6	-	2526	10	ISM	ENSMUSG00000034312.16	ENST00000618604.4	3232	11	150	5500	150	-5500	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2566	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGCGCAGCGCCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	90671678	90644930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648928_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540
ENSMUSG00000034312.16_90646309_90667485_1	chr6	-	1734	7	ISM	ENSMUSG00000034312.16	ENST00000618604.4	3232	11	4343	6878	4343	-6878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCTCTACGGCATGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	90667485	90646308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_90646368_90647390_90647517_90648928_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561
ENSMUSG00000034312.16_90646329_90740787_1	chr6	-	2380	9	ISM	ENSMUSG00000034312.16	ENST00000646269.1	3436	13	507	8420	507	-6898	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1795	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTCCGGCAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	90740787	90646328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_90646368_90647390_90647517_90648928_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90740736
ENSMUSG00000034312.16_90647391_90740933_1	chr6	-	2487	8	ISM	ENSMUSG00000034312.16	ENST00000646269.1	3436	13	361	9482	361	-7960	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1837	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGGTGTTGGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	90740933	90647390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_90647517_90648928_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90740736
ENSMUSG00000034312.16_90649000_90741123_1	chr6	-	2480	7	ISM	ENSMUSG00000034312.16	ENST00000646269.1	3436	13	171	11091	171	-9569	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGAAGGTTGAGAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	90741123	90648999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90740736
ENSMUSG00000034312.16_90649071_90741123_1	chr6	-	2409	7	ISM	ENSMUSG00000034312.16	ENST00000646269.1	3436	13	171	11162	171	-9640	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1087	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCTAATTGGGATCTATG	NA	NA	NA	NA	NA	NA	NA	NA	90741123	90649070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90740736
ENSMUSG00000034312.16_90657473_90693213_1	chr6	-	1725	4	ISM	ENSMUSG00000034312.16	ENST00000273221.8	3040	13	138	19564	138	-18042	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTGGGGGGTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	90693213	90657472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_90657635_90666561_90667809_90671540_90671833_90693189
ENSMUSG00000034312.16_90657507_90693283_1	chr6	-	1761	4	ISM	ENSMUSG00000034312.16	ENST00000273221.8	3040	13	68	19598	68	-18076	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGGCAGAAGCAGTTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	90693283	90657506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_90657635_90666561_90667809_90671540_90671833_90693189
ENSMUSG00000034312.16_90657564_90693328_1	chr6	-	1749	4	ISM	ENSMUSG00000034312.16	ENST00000273221.8	3040	13	23	19655	23	-18133	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGCTGCAGCGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	90693328	90657563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_90657635_90666561_90667809_90671540_90671833_90693189
ENSMUSG00000034317.15_68945292_68952048_1	chr3	-	228	3	FSM	ENSMUSG00000034317.15	ENSMUST00000107802.8	2939	3	40	2671	40	-2671	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAAGATCCCCGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	68952048	68945291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_68945342_68951100_68951176_68951945
ENSMUSG00000034320.15_61328139_61335220_1	chr18	-	5060	2	ISM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	9464	2148	-1779	-2148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCAGGTGCCGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	61335220	61328138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61332731_61334752
ENSMUSG00000034320.15_61328275_61335375_1	chr18	-	5079	2	ISM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	9309	2284	-1934	2019	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACGTTGTAGCCAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	61335375	61328274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61332731_61334752
ENSMUSG00000034320.15_61328349_61335441_1	chr18	-	5071	2	ISM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	9243	2358	-2000	1945	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAAGTAGGTCCTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	61335441	61328348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_61332731_61334752
ENSMUSG00000034321.15_41911315_41921509_1	chr19	-	1446	5	ISM	ENSMUSG00000034321.15	ENSMUST00000112123.4	2296	6	353	584	95	-584	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAACTGTTGACTCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	41921509	41911314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_41912528_41913149_41913235_41913627_41913679_41919794_41919870_41921487
ENSMUSG00000034321.15_41911450_41921737_1	chr19	-	1452	6	FSM	ENSMUSG00000034321.15	ENSMUST00000112123.4	2296	6	125	719	-2	555	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTACATAATAAACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	41921737	41911449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41919794_41919870_41921487_41921604_41921690
ENSMUSG00000034321.15_41911508_41921791_1	chr19	-	1448	6	FSM	ENSMUSG00000034321.15	ENSMUST00000112123.4	2296	6	71	777	-56	497	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTCAGCCACTGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	41921791	41911507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41919794_41919870_41921487_41921604_41921690
ENSMUSG00000034321.15_41912005_41921687_1	chr19	-	1040	6	NNC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACTGGAAAAAATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	41921687	41912004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_41912528_41913149_41913235_41913627_41913679_41916446_41916553_41919794_41919870_41921487
ENSMUSG00000034321.15_41912005_41921687_2	chr19	-	1052	7	NNC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACTGGAAAAAATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	41921687	41912004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919799_41919870_41921487
ENSMUSG00000034321.15_41913218_41921528_1	chr19	-	232	5	NIC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	76	-798	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTCCAATTACCTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	41921528	41913217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_-_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41921487
ENSMUSG00000034341.18_115969880_115971427_1	chr11	-	787	4	ISM	ENSMUSG00000034341.18	ENST00000590221.5	1680	8	6333	408	6333	198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTTACCCGGCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	115971427	115969879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115970423_115970533_115970611_115971047_115971159_115971371
ENSMUSG00000034341.18_115969918_115971494_1	chr11	-	816	4	ISM	ENSMUSG00000034341.18	ENST00000590221.5	1680	8	6266	446	6266	160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAAGGCCGCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	115971494	115969917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115970423_115970533_115970611_115971047_115971159_115971371
ENSMUSG00000034341.18_115970078_115972116_1	chr11	-	727	5	ISM	ENSMUSG00000034341.18	ENST00000590221.5	1680	8	5644	606	5644	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATACAGAGGGACTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	115972116	115970077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115970423_115970533_115970611_115971047_115971159_115971371_115971507_115972057
ENSMUSG00000034341.18_115970223_115971170_1	chr11	-	400	3	ISM	ENSMUSG00000034341.18	ENSMUST00000106444.4	1012	7	6651	145	6590	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACTCCTGGCCTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	115971170	115970222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115970423_115970533_115970611_115971047
ENSMUSG00000034341.18_115970223_115973238_1	chr11	-	753	6	ISM	ENSMUSG00000034341.18	ENST00000590221.5	1680	8	4522	751	4522	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACTCCTGGCCTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	115973238	115970222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115970423_115970533_115970611_115971047_115971159_115971371_115971507_115972057_115972151_115973101
ENSMUSG00000034341.18_115970342_115971506_1	chr11	-	416	4	ISM	ENSMUSG00000034341.18	ENSMUST00000074628.13	1826	8	6315	943	6254	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACCCCTTCCTGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	115971506	115970341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371
ENSMUSG00000034341.18_115970342_115977798_1	chr11	-	848	8	FSM	ENSMUSG00000034341.18	ENST00000590221.5	1680	8	-38	870	23	-264	multi-exon	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACCCCTTCCTGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	115977798	115970341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115970423_115970533_115970611_115971047_115971159_115971371_115971507_115972057_115972151_115973101_115973238_115974664_115974774_115977692
ENSMUSG00000034341.18_115971108_115973177_1	chr11	-	367	4	ISM	ENSMUSG00000034341.18	ENSMUST00000074628.13	1826	8	4644	1709	4583	-1030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATCCTGGGCCCATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	115973177	115971107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115971171_115971371_115971507_115972057_115972151_115973101
ENSMUSG00000034343.15_91178026_91213113_1	chr1	+	744	10	FSM	ENSMUSG00000034343.15	ENSMUST00000178627.8	1363	10	-15	634	0	-349	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTCTCTGATGTGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	91178025	91213113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_91178160_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUSG00000034343.15_91178026_91213462_1	chr1	+	997	8	FSM	ENSMUSG00000034343.15	ENST00000414443.5	1431	8	0	434	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTGGCAATAAGAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	91178025	91213462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_91178160_91181981_91182116_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUSG00000034343.15_91181979_91213462_3	chr1	+	896	8	FSM	ENSMUSG00000034343.15	ENST00000409332.5	1061	8	-6	171	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTGGCAATAAGAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	91181978	91213462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_91182116_91189988_91190019_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUSG00000034343.15_91181979_91213649_2	chr1	+	1053	7	ISM	ENSMUSG00000034343.15	ENST00000414443.5	1431	8	3953	247	-6	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGCTTTAATTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	91181978	91213649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91182116_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUSG00000034343.15_91181998_91213278_1	chr1	+	759	9	ISM	ENSMUSG00000034343.15	ENSMUST00000171112.8	1547	11	3710	371	13	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCCTCAAGAGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	91181997	91213278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUSG00000034343.15_91182046_91213348_1	chr1	+	781	9	ISM	ENSMUSG00000034343.15	ENSMUST00000171112.8	1547	11	3758	301	61	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCCCTCTGAAGTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	91182045	91213348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUSG00000034343.15_91189987_91213462_1	chr1	+	827	8	ISM	ENSMUSG00000034343.15	ENSMUST00000171112.8	1547	11	11699	187	8002	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTGGCAATAAGAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	91189986	91213462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUSG00000034343.15_91205981_91213896_2	chr1	+	1026	4	ISM	ENSMUSG00000034343.15	ENST00000409332.5	1061	8	23996	-263	23996	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTCGATTGCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	91205980	91213896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUSG00000034345.15_6130061_6135407_1	chr17	+	860	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	0	1385	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTTTTACCCTGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	6130060	6135407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_6130187_6131076_6131150_6134746
ENSMUSG00000034349.15_68913452_68914608_1	chr3	+	182	2	ISM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	1381	27348	1128	-27343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGAGCTCCTCGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	68913451	68914608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_68913547_68914521
ENSMUSG00000034349.15_68913510_68914664_1	chr3	+	180	2	ISM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	1439	27292	1186	-27287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTGGAGAGAAAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	68913509	68914664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_68913547_68914521
ENSMUSG00000034349.15_68935170_68935895_1	chr3	+	180	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	22846	6056	22846	-6056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATACACTGGAAAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	68935169	68935895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_68935232_68935777
ENSMUSG00000034349.15_68935831_68936816_1	chr3	+	183	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	23507	5135	23507	-5135	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACAGAAACTGCTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	68935830	68936816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_68935931_68936733
ENSMUSG00000034361.11_95275138_95277968_1	chr8	+	207	2	ISM	ENSMUSG00000034361.11	ENSMUST00000109537.2	2121	16	15443	19050	15443	-19050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCACGGTGAGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	95275137	95277968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95275174_95277797
ENSMUSG00000034361.11_95277893_95280061_1	chr8	+	204	3	ISM	ENSMUSG00000034361.11	ENSMUST00000109537.2	2121	16	18198	16957	18198	-16957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCTGGCAGGAAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	95277892	95280061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95277978_95278367_95278443_95280017
ENSMUSG00000034361.11_95280016_95281624_1	chr8	+	225	3	ISM	ENSMUSG00000034361.11	ENSMUST00000109537.2	2121	16	20321	15394	20321	-15394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGACCTGGAGAAGCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	95280015	95281624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95280090_95281302_95281387_95281557
ENSMUSG00000034361.11_95284082_95286758_1	chr8	+	182	3	ISM	ENSMUSG00000034361.11	ENSMUST00000109537.2	2121	16	24387	10260	24387	-10260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTGGGGCCCAGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	95284081	95286758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95284108_95284752_95284887_95286736
ENSMUSG00000034377.11_6188771_6227125_1	chr17	+	683	2	ISM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	400	59532	348	-59532	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATACCAGAAACTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	6188770	6227125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6189432_6227103
ENSMUSG00000034377.11_6188845_6227183_1	chr17	+	667	2	ISM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	474	59474	422	-59474	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAAGGCAGGTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	6188844	6227183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6189432_6227103
ENSMUSG00000034377.11_6188951_6235465_1	chr17	+	664	3	ISM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	580	51192	528	-51192	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGGTTTGTCCTGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	6188950	6235465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6189432_6227103_6227233_6235411
ENSMUSG00000034377.11_6189114_6249005_1	chr17	+	668	4	ISM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	743	37652	691	-37652	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCATGTCCTCCTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	6189113	6249005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6189432_6227103_6227233_6235411_6235574_6248946
ENSMUSG00000034377.11_6189314_6252053_1	chr17	+	669	5	ISM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	943	34604	891	-34604	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAATGAACAACTATGACG	NA	NA	NA	NA	NA	NA	NA	NA	6189313	6252053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6189432_6227103_6227233_6235411_6235574_6248946_6249128_6251974
ENSMUSG00000034377.11_6227102_6257189_1	chr17	+	633	5	ISM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	38731	29468	38679	-29468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGACTTACTGGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	6227101	6257189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6227233_6235411_6235574_6248946_6249128_6251974_6252110_6257165
ENSMUSG00000034377.11_6235467_6263736_1	chr17	+	668	5	ISM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	47096	22921	47044	-22921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGAACACCGAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	6235466	6263736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6235574_6248946_6249128_6251974_6252110_6257165_6257333_6263658
ENSMUSG00000034377.11_6248943_6263883_1	chr17	+	712	4	ISM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	60572	22774	60520	-22774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTCTTCCCCTTCCGATC	NA	NA	NA	NA	NA	NA	NA	NA	6248942	6263883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6249128_6251974_6252110_6257165_6257333_6263658
ENSMUSG00000034377.11_6249052_6264980_1	chr17	+	674	5	ISM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	60681	21677	60629	-21677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCACCATGAAGCGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	6249051	6264980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6249128_6251974_6252110_6257165_6257333_6263658_6263884_6264909
ENSMUSG00000034377.11_6252076_6265144_1	chr17	+	661	4	ISM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	63705	21513	63653	-21513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTCCTTTGCTGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	6252075	6265144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6252110_6257165_6257333_6263658_6263884_6264909
ENSMUSG00000034377.11_6257180_6269741_1	chr17	+	712	4	ISM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	68809	16916	68757	-16916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTCCCAAAATCTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	6257179	6269741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6257333_6263658_6263884_6264909_6265145_6269642
ENSMUSG00000034377.11_6257253_6269771_1	chr17	+	669	4	ISM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	68882	16886	68830	-16886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCCCAAACTCCCAAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	6257252	6269771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6257333_6263658_6263884_6264909_6265145_6269642
ENSMUSG00000034377.11_6263650_6272623_1	chr17	+	659	4	ISM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	75279	14034	75227	-14034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGAGATTTCTCGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	6263649	6272623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6263884_6264909_6265145_6269642_6269788_6272578
ENSMUSG00000034377.11_6263791_6274479_1	chr17	+	671	5	ISM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	75420	12178	75368	-12178	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGCTTGGCTGCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	6263790	6274479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6263884_6264909_6265145_6269642_6269788_6272578_6272724_6274426
ENSMUSG00000034377.11_6265086_6286556_1	chr17	+	643	6	ISM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	76715	101	76663	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGCTGTTCAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	6265085	6286556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6265145_6269642_6269788_6272578_6272724_6274426_6274521_6279609_6279754_6286500
ENSMUSG00000034377.11_6269640_6286657_1	chr17	+	688	5	ISM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	81269	0	81217	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGAGCTCATACTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	6269639	6286657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6269788_6272578_6272724_6274426_6274521_6279609_6279754_6286500
ENSMUSG00000034387.14_112346733_112356223_1	chr6	-	495	6	ISM	ENSMUSG00000034387.14	ENST00000544814.6	1083	11	5195	70	5195	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTATGGCACTGACCACC	NA	NA	NA	NA	NA	NA	NA	NA	112356223	112346732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112346804_112351739_112351848_112352513_112352620_112353352_112353446_112354545_112354632_112356192
ENSMUSG00000034387.14_112352511_112358008_1	chr6	-	546	6	ISM	ENSMUSG00000034387.14	ENST00000544814.6	1083	11	3410	5848	3410	-5848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGCTTGCCTTCAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	112358008	112352510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112352620_112353352_112353446_112354545_112354632_112356192_112356256_112357510_112357636_112357938
ENSMUSG00000034387.14_112352603_112359329_1	chr6	-	498	7	ISM	ENSMUSG00000034387.14	ENST00000544814.6	1083	11	2089	5940	2089	-5940	internal_fragment	TRUE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTATGTCCCCACACCAC	NA	NA	NA	NA	NA	NA	NA	NA	112359329	112352602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112352620_112353352_112353446_112354545_112354632_112356192_112356256_112357510_112357636_112357938_112358000_112359276
ENSMUSG00000034387.14_112353352_112359406_1	chr6	-	559	6	ISM	ENSMUSG00000034387.14	ENST00000544814.6	1083	11	2012	6689	2012	-6689	internal_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGACACCTCGGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	112359406	112353351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112353446_112354545_112354632_112356192_112356256_112357510_112357636_112357938_112358000_112359276
ENSMUSG00000034387.14_112354544_112360928_1	chr6	-	549	6	ISM	ENSMUSG00000034387.14	ENST00000544814.6	1083	11	490	7881	490	-7881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTGGGTTTGCGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	112360928	112354543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112354632_112356192_112356256_112357510_112357636_112357938_112358000_112359276_112359407_112360846
ENSMUSG00000034387.14_112356223_112361369_1	chr6	-	473	6	ISM	ENSMUSG00000034387.14	ENSMUST00000238755.2	1183	12	3610	9602	49	-9560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCAGCGGCTGCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	112361369	112356222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_112356256_112357510_112357636_112357938_112358000_112359276_112359407_112360846_112360929_112361327
ENSMUSG00000034401.17_111577300_111686339_4	chr4	+	2347	13	FSM	ENSMUSG00000034401.17	ENSMUST00000038868.14	2466	13	119	0	65	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGGTATTTTCATAGGT	NA	NA	NA	NA	NA	NA	NA	NA	111577299	111686339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
ENSMUSG00000034402.4_74944340_75023499_1	chr12	-	1144	2	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	199803	0	199803	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAGTGTCTCAAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75023499	74944339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_74945229_75023244
ENSMUSG00000034402.4_74944598_75134328_1	chr12	-	1234	4	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	88974	258	88974	-258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAGAACACAGCCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	75134328	74944597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_74945229_75023244_75023498_75054373_75054574_75134178
ENSMUSG00000034402.4_74944762_75134471_1	chr12	-	1213	4	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	88831	422	88831	-422	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTCACCAAAGCCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	75134471	74944761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_74945229_75023244_75023498_75054373_75054574_75134178
ENSMUSG00000034402.4_74944830_75134551_1	chr12	-	1225	4	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	88751	490	88751	-490	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGAAGGGGTGGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	75134551	74944829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_74945229_75023244_75023498_75054373_75054574_75134178
ENSMUSG00000034402.4_74944973_75161058_1	chr12	-	1230	5	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	62244	633	62244	-633	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATCCAGACGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	75161058	74944972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_74945229_75023244_75023498_75054373_75054574_75134178_75134606_75160964
ENSMUSG00000034402.4_74945040_75161104_1	chr12	-	1209	5	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	62198	700	62198	-700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCCGCCCTTTGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	75161104	74945039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_74945229_75023244_75023498_75054373_75054574_75134178_75134606_75160964
ENSMUSG00000034402.4_74945098_75161154_1	chr12	-	1201	5	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	62148	758	62148	-758	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGAGGATCCAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	75161154	74945097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_74945229_75023244_75023498_75054373_75054574_75134178_75134606_75160964
ENSMUSG00000034402.4_75023326_75166722_1	chr12	-	1220	5	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	56580	78986	56580	-78986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGAGTGTGGATGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	75166722	75023325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_75023498_75054373_75054574_75134178_75134606_75160964_75161358_75166694
ENSMUSG00000034402.4_75023470_75177718_1	chr12	-	1211	6	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	45584	79130	45584	-79130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGACATCTGTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	75177718	75023469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_75023498_75054373_75054574_75134178_75134606_75160964_75161358_75166694_75166811_75177671
ENSMUSG00000034402.4_75054428_75184432_1	chr12	-	1226	6	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	38870	110088	38870	-110088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGATTATATTGTCTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	75184432	75054427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_75054574_75134178_75134606_75160964_75161358_75166694_75166811_75177671_75177801_75184417
ENSMUSG00000034402.4_75054497_75184475_1	chr12	-	1200	6	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	38827	110157	38827	-110157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGCTGAATAATGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	75184475	75054496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_75054574_75134178_75134606_75160964_75161358_75166694_75166811_75177671_75177801_75184417
ENSMUSG00000034402.4_75054546_75184524_1	chr12	-	1200	6	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	38778	110206	38778	-110206	internal_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACCACAATTTTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	75184524	75054545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_75054574_75134178_75134606_75160964_75161358_75166694_75166811_75177671_75177801_75184417
ENSMUSG00000034402.4_75134179_75201055_1	chr12	-	1296	6	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	22247	189839	22247	-189839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTATCTTTTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	75201055	75134178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_75134606_75160964_75161358_75166694_75166811_75177671_75177801_75184417_75184525_75200931
ENSMUSG00000034402.4_75134299_75223256_1	chr12	-	1203	7	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	46	189959	46	-189959	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTATGTGTCCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	75223256	75134298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_75134606_75160964_75161358_75166694_75166811_75177671_75177801_75184417_75184525_75200931_75201056_75223229
ENSMUSG00000034403.17_98509879_98511793_1	chrX	-	1375	2	ISM	ENSMUSG00000034403.17	ENSMUST00000113790.8	2108	3	2500	535	2485	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTAGACTGTGTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	98511793	98509878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_98511189_98511728
ENSMUSG00000034403.17_98510011_98514278_1	chrX	-	1426	3	FSM	ENSMUSG00000034403.17	ENSMUST00000113790.8	2108	3	15	667	0	-259	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATGACATTTAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	98514278	98510010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_98511189_98511728_98511921_98514222
ENSMUSG00000034403.17_98510771_98514307_1	chrX	-	1235	2	FSM	ENSMUSG00000034403.17	ENSMUST00000167246.2	2666	2	34	1397	-9	-1019	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCATCTCTTCAGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	98514307	98510770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_98511921_98514222
ENSMUSG00000034403.17_98511851_98514718_1	chrX	-	366	3	FSM	ENSMUSG00000034403.17	ENSMUST00000113792.2	3038	3	161	2511	161	-2099	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGATCAACTGCCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	98514718	98511850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_98511921_98514222_98514463_98514662
ENSMUSG00000034412.14_4136973_4165505_1	chr11	+	1773	9	FSM	ENSMUSG00000034412.14	ENSMUST00000180088.2	1921	9	151	-3	151	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTGTATAGTTAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	4136972	4165505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
ENSMUSG00000034416.19_117726554_117741718_1	chr8	-	709	5	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	67464	4124	67464	-4124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCCGTCATTCTTATCAT	NA	NA	NA	NA	NA	NA	NA	NA	117741718	117726553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117726723_117736308_117736470_117738236_117738365_117740602_117740737_117741601
ENSMUSG00000034416.19_117736338_117741915_1	chr8	-	708	4	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	67267	13908	67267	-13908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGCGCTACCGGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	117741915	117736337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117736470_117738236_117738365_117740602_117740737_117741601
ENSMUSG00000034416.19_117740649_117746263_1	chr8	-	722	4	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	62919	18219	62919	-18219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTTCTGCACTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	117746263	117740648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117740737_117741601_117741930_117743556_117743743_117746143
ENSMUSG00000034416.19_117741768_117748675_1	chr8	-	699	5	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	60507	19338	60507	-19338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGGAATGCCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	117748675	117741767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117741930_117743556_117743743_117746143_117746282_117747778_117747873_117748556
ENSMUSG00000034416.19_117746196_117755090_1	chr8	-	687	5	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	54092	23766	54092	-23766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTCGCCTCAAGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	117755090	117746195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117746282_117747778_117747873_117748556_117748762_117750601_117750831_117755017
ENSMUSG00000034416.19_117756276_117761949_1	chr8	-	725	4	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	47233	33846	47233	-33846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACAGTGACCAAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	117761949	117756275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117756475_117757280_117757481_117759422_117759570_117761770
ENSMUSG00000034416.19_117757309_117764852_1	chr8	-	684	5	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	44330	34879	44330	-34879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCAGCCGAGCAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	117764852	117757308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117757481_117759422_117759570_117761770_117761950_117762545_117762648_117764768
ENSMUSG00000034416.19_117759470_117767478_1	chr8	-	699	5	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	41704	37040	41704	-37040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAAGGTGTTTCCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	117767478	117759469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117759570_117761770_117761950_117762545_117762648_117764768_117765000_117767391
ENSMUSG00000034416.19_117764945_117771313_1	chr8	-	688	5	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	37869	42515	37869	-42515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCGGAAGCTCCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	117771313	117764944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117765000_117767391_117767586_117768947_117769168_117769971_117770104_117771226
ENSMUSG00000034416.19_117768972_117774219_1	chr8	-	682	5	ISM	ENSMUSG00000034416.19	ENSMUST00000098375.6	7386	43	34969	46554	34963	-46542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCCTCCTGTGGCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	117774219	117768971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117769168_117769971_117770104_117771226_117771354_117772801_117772927_117774117
ENSMUSG00000034416.19_117769030_117774281_1	chr8	-	686	5	ISM	ENSMUSG00000034416.19	ENSMUST00000098375.6	7386	43	34907	46612	34901	-46600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCAGCCTGGGCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	117774281	117769029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117769168_117769971_117770104_117771226_117771354_117772801_117772927_117774117
ENSMUSG00000034416.19_117774217_117781735_1	chr8	-	689	5	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	27447	51787	27447	-51787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGGCTACCAGGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	117781735	117774216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117774301_117776645_117776778_117777768_117777961_117778381_117778528_117781600
ENSMUSG00000034416.19_117776665_117783121_1	chr8	-	697	5	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	26061	54235	26061	-54235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACACCTGCGGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	117783121	117776664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117776778_117777768_117777961_117778381_117778528_117781600_117781778_117783052
ENSMUSG00000034416.19_117777810_117784220_1	chr8	-	685	5	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	24962	55380	24962	-55380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCTCTGGGCAACTT	NA	NA	NA	NA	NA	NA	NA	NA	117784220	117777809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117777961_117778381_117778528_117781600_117781778_117783052_117783195_117784151
ENSMUSG00000034416.19_117786325_117792622_1	chr8	-	711	5	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	16560	63895	16560	-63895	internal_fragment	TRUE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCACCGCTCAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	117792622	117786324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117786409_117787246_117787365_117789974_117790025_117790792_117790871_117792241
ENSMUSG00000034416.19_117787281_117794918_1	chr8	-	722	5	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	14264	64851	14264	-64851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACCCGGGCTTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	117794918	117787280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117787365_117789974_117790025_117790792_117790871_117792241_117792656_117794822
ENSMUSG00000034416.19_117792404_117802959_1	chr8	-	727	4	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	6223	69974	6223	-69974	internal_fragment	TRUE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAGCTTGGGTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	117802959	117792403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117792656_117794822_117795053_117799183_117799332_117802862
ENSMUSG00000034416.19_117792572_117807521_1	chr8	-	704	5	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	1661	70142	1661	-70142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTTGGACAGAGACATC	NA	NA	NA	NA	NA	NA	NA	NA	117807521	117792571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117792656_117794822_117795053_117799183_117799332_117802862_117802974_117807390
ENSMUSG00000034416.19_117794912_117808187_1	chr8	-	711	5	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	995	72482	995	-72482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACTGGCCTGGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	117808187	117794911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117795053_117799183_117799332_117802862_117802974_117807390_117807577_117808062
ENSMUSG00000034416.19_117799213_117809013_1	chr8	-	701	5	ISM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	169	76783	169	-76783	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTTTTGACCCCTACAA	NA	NA	NA	NA	NA	NA	NA	NA	117809013	117799212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117799332_117802862_117802974_117807390_117807577_117808062_117808228_117808893
ENSMUSG00000034424.6_117708735_117710586_1	chr8	-	771	2	ISM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	9690	186	9690	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATAAAACATTCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	117710586	117708734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117709466_117710546
ENSMUSG00000034424.6_117708785_117710637_1	chr8	-	772	2	ISM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	9639	236	9639	-236	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTGTTGTTTTCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	117710637	117708784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117709466_117710546
ENSMUSG00000034424.6_117708846_117710679_1	chr8	-	753	2	ISM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	9597	297	9597	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGTGTTGTACAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	117710679	117708845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_117709466_117710546
ENSMUSG00000034424.6_117708986_117720096_1	chr8	-	826	5	FSM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	180	437	180	-437	multi-exon	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATGGCGAGACCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	117720096	117708985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862_117715943_117720026
ENSMUSG00000034424.6_117709085_117720152_1	chr8	-	783	5	FSM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	124	536	124	-536	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTGGTGACGGACCAC	NA	NA	NA	NA	NA	NA	NA	NA	117720152	117709084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862_117715943_117720026
ENSMUSG00000034424.6_117709127_117720276_1	chr8	-	865	5	FSM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	0	578	0	-578	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTCTGAGGATCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	117720276	117709126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862_117715943_117720026
ENSMUSG00000034429.16_75841156_75846701_1	chr15	+	722	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109966.8	1803	4	184	897	128	-882	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTGTGAGCTCTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	75841155	75846701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_75841254_75844930_75845058_75845390_75845505_75846318
ENSMUSG00000034429.16_75844967_75846848_1	chr15	+	735	3	FSM	ENSMUSG00000034429.16	ENSMUST00000229652.2	2204	3	734	735	734	-735	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACACCGGGGAGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	75844966	75846848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_75845058_75845390_75845505_75846318
ENSMUSG00000034432.12_90531250_90541063_1	chr1	+	1740	8	FSM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	547	0	57	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTAGTGGGTTACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	90531249	90541063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
ENSMUSG00000034445.9_10555015_10566196_1	chr19	+	1464	8	FSM	ENSMUSG00000034445.9	ENSMUST00000235271.2	2661	8	200	997	160	284	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTACCACTCCTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	10555014	10566196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_10555258_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ENSMUSG00000034449.8_84712244_84716285_1	chr11	-	461	5	ISM	ENSMUSG00000034449.8	ENSMUST00000047560.8	1254	7	3505	562	3505	-562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCACATGTTCAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	84716285	84712243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_84712295_84712490_84712584_84713136_84713267_84713897_84713993_84716193
ENSMUSG00000034450.9_66227822_66241611_1	chr14	-	606	5	FSM	ENSMUSG00000034450.9	ENST00000454030.1	620	5	17	-3	17	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGCAGGGTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	66241611	66227821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_66227993_66228478_66228629_66235008_66235117_66240039_66240136_66241530
ENSMUSG00000034450.9_66227822_66241611_2	chr14	-	601	5	NIC	ENSMUSG00000034450.9	novel	2263	12	NA	NA	17	3	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGCAGGGTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	66241611	66227821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_-_66227993_66228478_66228629_66235008_66235117_66240039_66240131_66241530
ENSMUSG00000034450.9_66227822_66241611_3	chr14	-	602	5	NNC	ENSMUSG00000034450.9	novel	620	5	NA	NA	17	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGCAGGGTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	66241611	66227821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_66227989_66228478_66228629_66235008_66235117_66240039_66240136_66241530
ENSMUSG00000034450.9_66227822_66241611_4	chr14	-	605	5	NNC	ENSMUSG00000034450.9	novel	620	5	NA	NA	17	3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1098	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGCAGGGTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	66241611	66227821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_66227993_66228478_66228629_66235008_66235117_66240040_66240136_66241530
ENSMUSG00000034450.9_66227822_66241611_5	chr14	-	605	5	NNC	ENSMUSG00000034450.9	novel	620	5	NA	NA	17	3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGCAGGGTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	66241611	66227821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_66227993_66228478_66228629_66235009_66235117_66240039_66240136_66241530
ENSMUSG00000034450.9_66227822_66241611_6	chr14	-	600	5	NNC	ENSMUSG00000034450.9	novel	620	5	NA	NA	17	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGCAGGGTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	66241611	66227821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_66227993_66228478_66228629_66235008_66235117_66240039_66240136_66241536
ENSMUSG00000034453.9_84520041_84562726_1	chr10	+	2529	10	ISM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	61885	316	61885	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTGCAGGATACCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	84520040	84562726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ENSMUSG00000034462.10_104628084_104637252_1	chr5	+	479	3	ISM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	40	14461	40	-14461	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTTCAGCACTTTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	104628083	104637252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_104628241_104634512_104634681_104637098
ENSMUSG00000034462.10_104628184_104638532_1	chr5	+	430	4	ISM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	140	13181	140	-13181	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGATATCAACTTCGCA	NA	NA	NA	NA	NA	NA	NA	NA	104628183	104638532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_104628241_104634512_104634681_104637098_104637281_104638509
ENSMUSG00000034462.10_104634606_104642819_1	chr5	+	439	4	ISM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	6562	8894	6562	-8894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGCAGAAATGGAACTC	NA	NA	NA	NA	NA	NA	NA	NA	104634605	104642819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_104634681_104637098_104637281_104638509_104638631_104642758
ENSMUSG00000034462.10_104637097_104646439_1	chr5	+	537	4	ISM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	9053	5274	9053	-5274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTAATTCTTGGTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	104637096	104646439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_104637281_104638509_104638631_104642758_104642858_104646306
ENSMUSG00000034462.10_104637236_104646672_1	chr5	+	436	5	ISM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	9192	5041	9192	-5041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGGCGACCAGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	104637235	104646672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623
ENSMUSG00000034462.10_104638559_104647067_1	chr5	+	443	5	ISM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	10515	4646	10515	-4646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTCCGATGAGCAGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	104638558	104647067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035
ENSMUSG00000034462.10_104642758_104647199_1	chr5	+	504	4	ISM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	14714	4514	14714	-4514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTACCAAAGTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	104642757	104647199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_104642858_104646306_104646429_104646623_104646742_104647035
ENSMUSG00000034462.10_104646371_104650218_1	chr5	+	401	4	ISM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	18327	1495	18327	-1495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGTGATTGTCAAGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	104646370	104650218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_104646429_104646623_104646742_104647035_104647200_104650157
ENSMUSG00000034462.10_104646405_104650291_1	chr5	+	440	4	ISM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	18361	1422	18361	-1422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCGTGGCTGAGGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	104646404	104650291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_104646429_104646623_104646742_104647035_104647200_104650157
ENSMUSG00000034462.10_104646697_104651377_1	chr5	+	417	4	ISM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	18653	336	18653	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCTGGAGCGCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	104646696	104651377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_104646742_104647035_104647200_104650157_104650306_104651317
ENSMUSG00000034462.10_104647053_104651480_1	chr5	+	458	3	ISM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	19009	233	19009	-233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTCCTCCCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	104647052	104651480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_104647200_104650157_104650306_104651317
ENSMUSG00000034462.10_104647134_104651539_1	chr5	+	436	3	ISM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	19090	174	19090	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTCCATGCCTAATAATC	NA	NA	NA	NA	NA	NA	NA	NA	104647133	104651539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_104647200_104650157_104650306_104651317
ENSMUSG00000034462.10_104650231_104651670_1	chr5	+	428	2	ISM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	22187	43	22187	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTATAATTTTCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	104650230	104651670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_104650306_104651317
ENSMUSG00000034473.15_35131501_35169291_1	chr16	-	3625	5	ISM	ENSMUSG00000034473.15	ENSMUST00000043521.5	3992	7	14997	0	12840	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAACCTTTGCCCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	35169291	35131500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200
ENSMUSG00000034473.15_35131628_35169337_1	chr16	-	3544	5	ISM	ENSMUSG00000034473.15	ENSMUST00000043521.5	3992	7	14951	127	12794	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTGTGTTTGTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	35169337	35131627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200
ENSMUSG00000034473.15_35131767_35182017_1	chr16	-	3519	6	ISM	ENSMUSG00000034473.15	ENSMUST00000043521.5	3992	7	2271	266	114	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGATGAATTTGGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35182017	35131766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35181930
ENSMUSG00000034473.15_35131803_35182131_1	chr16	-	3597	6	ISM	ENSMUSG00000034473.15	ENSMUST00000043521.5	3992	7	2157	302	0	-302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAAAGATGAAACACATTC	NA	NA	NA	NA	NA	NA	NA	NA	35182131	35131802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35181930
ENSMUSG00000034473.15_35131914_35184238_1	chr16	-	3529	7	FSM	ENSMUSG00000034473.15	ENSMUST00000043521.5	3992	7	50	413	50	-413	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCAGAGCAGTGACATAC	NA	NA	NA	NA	NA	NA	NA	NA	35184238	35131913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35181930_35182130_35184193
ENSMUSG00000034473.15_35134291_35182131_1	chr16	-	634	3	FSM	ENSMUSG00000034473.15	ENST00000481965.6	633	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGTAAGAAAACTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	35182131	35134290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_35134658_35139173_35139240_35181930
ENSMUSG00000034484.9_53309461_53342700_1	chr18	+	754	8	ISM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	73	11237	73	-11237	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGACTTAAGGCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	53309460	53342700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659
ENSMUSG00000034484.9_53322725_53343515_1	chr18	+	806	8	ISM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	13337	10422	13337	-10422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGCTGATTTTTCGAC	NA	NA	NA	NA	NA	NA	NA	NA	53322724	53343515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401
ENSMUSG00000034484.9_53327500_53343864_1	chr18	+	782	8	ISM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	18112	10073	18112	-10073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTTAGCCGTGTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	53327499	53343864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770
ENSMUSG00000034484.9_53327622_53345904_1	chr18	+	740	9	ISM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	18234	8033	18234	-8033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTCTCAGCTGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	53327621	53345904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824
ENSMUSG00000034484.9_53331257_53346030_1	chr18	+	756	7	ISM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	21869	7907	21869	-7907	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCCCTATTCTACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	53331256	53346030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824
ENSMUSG00000034484.9_53332827_53349475_1	chr18	+	736	7	ISM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	23439	4462	23439	-4462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTGGCAGAAATGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	53332826	53349475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452
ENSMUSG00000034484.9_53332893_53349515_1	chr18	+	710	7	ISM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	23505	4422	23505	-4422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACGTGAAACTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	53332892	53349515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452
ENSMUSG00000034484.9_53336111_53351254_1	chr18	+	796	7	ISM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	26723	2683	26723	-2683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTATTATAATTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	53336110	53351254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173
ENSMUSG00000034484.9_53342658_53351432_1	chr18	+	789	7	ISM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	33270	2505	33270	-2505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCTCATTTTCCTTATA	NA	NA	NA	NA	NA	NA	NA	NA	53342657	53351432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360
ENSMUSG00000034484.9_53343451_53353493_1	chr18	+	712	7	ISM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	34063	444	34063	-444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTACCCCTGTGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	53343450	53353493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ENSMUSG00000034484.9_53343486_53353601_1	chr18	+	785	7	ISM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	34098	336	34098	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATATGCGCTGACATT	NA	NA	NA	NA	NA	NA	NA	NA	53343485	53353601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ENSMUSG00000034484.9_53345929_53353754_1	chr18	+	710	5	ISM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	36541	183	36541	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTACAATCTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	53345928	53353754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ENSMUSG00000034484.9_53345984_53353801_1	chr18	+	702	5	ISM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	36596	136	36596	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTATGAAGCAAATTAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	53345983	53353801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ENSMUSG00000034484.9_53349453_53353937_1	chr18	+	791	4	ISM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	40065	0	40065	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTAGGGATCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	53349452	53353937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_53349597_53351173_53351255_53351360_53351433_53353443
ENSMUSG00000034501.8_72583157_72620599_1	chr12	+	2620	9	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	0	6294	0	-6294	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGCTGCGAACAGCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	72583156	72620599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616596_72620263
ENSMUSG00000034501.8_72588440_72620991_1	chr12	+	2564	8	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	5283	5902	5283	-5902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTCCAGAAGACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	72588439	72620991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616596_72620263
ENSMUSG00000034501.8_72588496_72621050_1	chr12	+	2567	8	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	5339	5843	5339	-5843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAGTCACGTGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	72588495	72621050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616596_72620263
ENSMUSG00000034501.8_72588567_72621103_1	chr12	+	2549	8	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	5410	5790	5410	-5790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGTCCATACAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	72588566	72621103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616596_72620263
ENSMUSG00000034501.8_72588858_72622248_1	chr12	+	2552	9	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	5701	4645	5701	-4645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGGAAGAGAGCAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	72588857	72622248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616596_72620263_72621277_72622127
ENSMUSG00000034501.8_72602337_72626176_1	chr12	+	2557	9	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	19180	717	19180	-717	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAACTGCTTTATGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	72602336	72626176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616596_72620263_72621277_72622127_72622315_72626077
ENSMUSG00000034501.8_72602922_72626531_1	chr12	+	2554	8	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	19765	362	19765	-362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATATTTGTGCTGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	72602921	72626531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616596_72620263_72621277_72622127_72622315_72626077
ENSMUSG00000034501.8_72603006_72626620_1	chr12	+	2559	8	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	19849	273	19849	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAAAAGTGGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	72603005	72626620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616596_72620263_72621277_72622127_72622315_72626077
ENSMUSG00000034501.8_72603040_72626689_1	chr12	+	2594	8	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	19883	204	19883	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGTGTTTTAAATAATAA	NA	NA	NA	NA	NA	NA	NA	NA	72603039	72626689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616596_72620263_72621277_72622127_72622315_72626077
ENSMUSG00000034520.15_102690405_102695430_1	chr11	-	2017	3	FSM	ENSMUSG00000034520.15	ENSMUST00000107075.9	2314	3	297	0	297	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTAAAGGGTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	102695430	102690404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_102692022_102693666_102693743_102695106
ENSMUSG00000034520.15_102690405_102695502_1	chr11	-	2089	3	FSM	ENSMUSG00000034520.15	ENSMUST00000107075.9	2314	3	225	0	225	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTAAAGGGTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	102695502	102690404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_102692022_102693666_102693743_102695106
ENSMUSG00000034520.15_102690537_102695574_1	chr11	-	2029	3	FSM	ENSMUSG00000034520.15	ENSMUST00000107075.9	2314	3	153	132	153	-132	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGACAGTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	102695574	102690536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_102692022_102693666_102693743_102695106
ENSMUSG00000034532.10_65508186_65536846_1	chr14	+	687	4	NNC	ENSMUSG00000034532.10	novel	695	4	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTTCAGGCTAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	65508185	65536846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_65508285_65531232_65531440_65532841_65533011_65536634
ENSMUSG00000034532.10_65531230_65536846_1	chr14	+	587	3	ISM	ENSMUSG00000034532.10	ENST00000346498.6	695	4	23056	0	23056	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTTCAGGCTAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	65531229	65536846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_65531440_65532841_65533007_65536634
ENSMUSG00000034533.11_119437991_119452003_1	chr9	-	1959	6	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	71388	0	71388	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTCCAGCATGCACGG	NA	NA	NA	NA	NA	NA	NA	NA	119452003	119437990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119439208_119442586_119442858_119445765_119445867_119446738_119446881_119447909_119447964_119451829
ENSMUSG00000034533.11_119438154_119453130_1	chr9	-	1951	7	ISM	ENSMUSG00000034533.11	ENST00000643924.1	5869	27	70293	129	70261	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCCCAGACAAATCGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	119453130	119438153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119439208_119442586_119442858_119445765_119445867_119446738_119446881_119447909_119447964_119451829_119452115_119453086
ENSMUSG00000034533.11_119438237_119453166_1	chr9	-	1904	7	ISM	ENSMUSG00000034533.11	ENST00000643924.1	5869	27	70257	212	70225	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATGTGCCCAGGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	119453166	119438236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119439208_119442586_119442858_119445765_119445867_119446738_119446881_119447909_119447964_119451829_119452115_119453086
ENSMUSG00000034533.11_119438376_119456231_1	chr9	-	1903	8	ISM	ENSMUSG00000034533.11	ENST00000643924.1	5869	27	67192	351	67160	-351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACTAATCTTTCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	119456231	119438375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119439208_119442586_119442858_119445765_119445867_119446738_119446881_119447909_119447964_119451829_119452115_119453086_119453210_119456136
ENSMUSG00000034533.11_119438544_119459286_1	chr9	-	1950	9	ISM	ENSMUSG00000034533.11	ENST00000643924.1	5869	27	64137	519	64105	-519	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTAGAATCCCAAAACCTA	NA	NA	NA	NA	NA	NA	NA	NA	119459286	119438543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119439208_119442586_119442858_119445765_119445867_119446738_119446881_119447909_119447964_119451829_119452115_119453086_119453210_119456136_119456311_119459150
ENSMUSG00000034533.11_119438756_119462844_1	chr9	-	1919	11	ISM	ENSMUSG00000034533.11	ENST00000643924.1	5869	27	60579	731	60547	-731	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTACATCATCATCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	119462844	119438755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119439208_119442586_119442858_119445765_119445867_119446738_119446881_119447909_119447964_119451829_119452115_119453086_119453210_119456136_119456311_119459150_119459306_119460520_119460645_119462806
ENSMUSG00000034533.11_119438822_119462902_1	chr9	-	1911	11	ISM	ENSMUSG00000034533.11	ENST00000643924.1	5869	27	60521	797	60489	-797	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCCCAACAGCAATGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	119462902	119438821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119439208_119442586_119442858_119445765_119445867_119446738_119446881_119447909_119447964_119451829_119452115_119453086_119453210_119456136_119456311_119459150_119459306_119460520_119460645_119462806
ENSMUSG00000034533.11_119438886_119462947_1	chr9	-	1892	11	ISM	ENSMUSG00000034533.11	ENST00000643924.1	5869	27	60476	861	60444	-861	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGCTGGGATGGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	119462947	119438885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119439208_119442586_119442858_119445765_119445867_119446738_119446881_119447909_119447964_119451829_119452115_119453086_119453210_119456136_119456311_119459150_119459306_119460520_119460645_119462806
ENSMUSG00000034533.11_119439063_119464710_1	chr9	-	1917	12	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	58681	1072	58681	-1038	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTCCCTGCCCGCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	119464710	119439062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119439208_119442586_119442858_119445765_119445867_119446738_119446881_119447909_119447964_119451829_119452115_119453086_119453210_119456136_119456311_119459150_119459306_119460520_119460645_119462806_119462948_119464508
ENSMUSG00000034533.11_119439113_119464767_1	chr9	-	1924	12	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	58624	1122	58624	-1088	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGATTCGAGCAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	119464767	119439112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119439208_119442586_119442858_119445765_119445867_119446738_119446881_119447909_119447964_119451829_119452115_119453086_119453210_119456136_119456311_119459150_119459306_119460520_119460645_119462806_119462948_119464508
ENSMUSG00000034533.11_119439166_119464817_1	chr9	-	1921	12	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	58574	1175	58574	-1141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCCCACGCTCTTACGC	NA	NA	NA	NA	NA	NA	NA	NA	119464817	119439165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119439208_119442586_119442858_119445765_119445867_119446738_119446881_119447909_119447964_119451829_119452115_119453086_119453210_119456136_119456311_119459150_119459306_119460520_119460645_119462806_119462948_119464508
ENSMUSG00000034533.11_119442773_119467589_1	chr9	-	1925	12	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	55802	4782	55802	-4748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCATGATGGTGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	119467589	119442772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119442858_119445765_119445867_119446738_119446881_119447909_119447964_119451829_119452115_119453086_119453210_119456136_119456311_119459150_119459306_119460520_119460645_119462806_119462948_119464508_119464962_119467501
ENSMUSG00000034533.11_119446738_119467861_1	chr9	-	2012	10	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	55530	8747	55530	-8713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCTCCGGCGTGTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	119467861	119446737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119446881_119447909_119447964_119451829_119452115_119453086_119453210_119456136_119456311_119459150_119459306_119460520_119460645_119462806_119462948_119464508_119464962_119467501
ENSMUSG00000034533.11_119451909_119479927_1	chr9	-	1926	10	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	43464	13918	43464	-13884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCCACTTCTTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	119479927	119451908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119452115_119453086_119453210_119456136_119456311_119459150_119459306_119460520_119460645_119462806_119462948_119464508_119464962_119467501_119467862_119477103_119477278_119479911
ENSMUSG00000034533.11_119451951_119479998_1	chr9	-	1955	10	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	43393	13960	43393	-13926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTCGTGACTAACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	119479998	119451950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119452115_119453086_119453210_119456136_119456311_119459150_119459306_119460520_119460645_119462806_119462948_119464508_119464962_119467501_119467862_119477103_119477278_119479911
ENSMUSG00000034533.11_119452023_119480060_1	chr9	-	1945	10	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	43331	14032	43331	-13998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAACCTCTTCGCCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	119480060	119452022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119452115_119453086_119453210_119456136_119456311_119459150_119459306_119460520_119460645_119462806_119462948_119464508_119464962_119467501_119467862_119477103_119477278_119479911
ENSMUSG00000034533.11_119453165_119487522_1	chr9	-	1919	10	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	35869	15174	35869	-15140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCGTCCATCAAAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	119487522	119453164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119453210_119456136_119456311_119459150_119459306_119460520_119460645_119462806_119462948_119464508_119464962_119467501_119467862_119477103_119477278_119479911_119480151_119487468
ENSMUSG00000034533.11_119456187_119490213_1	chr9	-	1907	10	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	33178	18196	33178	-18162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTTCACCAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	119490213	119456186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119456311_119459150_119459306_119460520_119460645_119462806_119462948_119464508_119464962_119467501_119467862_119477103_119477278_119479911_119480151_119487468_119487581_119490188
ENSMUSG00000034533.11_119456247_119490285_1	chr9	-	1919	10	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	33106	18256	33106	-18222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTCACCTTCATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	119490285	119456246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119456311_119459150_119459306_119460520_119460645_119462806_119462948_119464508_119464962_119467501_119467862_119477103_119477278_119479911_119480151_119487468_119487581_119490188
ENSMUSG00000034533.11_119460563_119493920_1	chr9	-	1929	9	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	29471	22572	29471	-22538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCGGAGGAGCTGGACGAG	NA	NA	NA	NA	NA	NA	NA	NA	119493920	119460562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119460645_119462806_119462948_119464508_119464962_119467501_119467862_119477103_119477278_119479911_119480151_119487468_119487581_119490188_119490483_119493846
ENSMUSG00000034533.11_119462897_119495024_1	chr9	-	1926	9	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	28367	24906	28367	-24872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCACCCTCCGGGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	119495024	119462896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119462948_119464508_119464962_119467501_119467862_119477103_119477278_119479911_119480151_119487468_119487581_119490188_119490483_119493846_119494018_119494952
ENSMUSG00000034533.11_119464509_119495150_1	chr9	-	2001	8	ISM	ENSMUSG00000034533.11	ENST00000643924.1	5869	27	28273	26484	28241	-26484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAAGTCTCTTCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	119495150	119464508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119464962_119467501_119467862_119477103_119477278_119479911_119480151_119487468_119487581_119490188_119490483_119493846_119494018_119494952
ENSMUSG00000034533.11_119464639_119495479_1	chr9	-	1919	9	ISM	ENSMUSG00000034533.11	ENST00000643924.1	5869	27	27944	26614	27912	-26614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCACTGATCCTAACG	NA	NA	NA	NA	NA	NA	NA	NA	119495479	119464638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119464962_119467501_119467862_119477103_119477278_119479911_119480151_119487468_119487581_119490188_119490483_119493846_119494018_119494952_119495151_119495431
ENSMUSG00000034533.11_119464871_119499475_1	chr9	-	1912	11	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	23916	26880	23916	-26846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAGCACTGGCCCGGATT	NA	NA	NA	NA	NA	NA	NA	NA	119499475	119464870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119464962_119467501_119467862_119477103_119477278_119479911_119480151_119487468_119487581_119490188_119490483_119493846_119494018_119494952_119495151_119495431_119495574_119499019_119499084_119499408
ENSMUSG00000034533.11_119467499_119499600_1	chr9	-	1949	10	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	23791	29508	23791	-29474	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGACCCCTCACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	119499600	119467498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119467862_119477103_119477278_119479911_119480151_119487468_119487581_119490188_119490483_119493846_119494018_119494952_119495151_119495431_119495574_119499019_119499084_119499408
ENSMUSG00000034533.11_119467789_119516981_1	chr9	-	1916	13	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	6410	29798	6410	-29764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCTGGGCAACCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	119516981	119467788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119467862_119477103_119477278_119479911_119480151_119487468_119487581_119490188_119490483_119493846_119494018_119494952_119495151_119495431_119495574_119499019_119499084_119499408_119499601_119500586_119500679_119501183_119501313_119516945
ENSMUSG00000034533.11_119477104_119520628_1	chr9	-	2007	13	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	2763	39113	2763	-39079	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACGTCTTCTCTTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	119520628	119477103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119477278_119479911_119480151_119487468_119487581_119490188_119490483_119493846_119494018_119494952_119495151_119495431_119495574_119499019_119499084_119499408_119499601_119500586_119500679_119501183_119501313_119516945_119517027_119520509
ENSMUSG00000034533.11_119477227_119523153_1	chr9	-	1916	14	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	238	39236	238	-39202	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCTACTACTACTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	119523153	119477226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119477278_119479911_119480151_119487468_119487581_119490188_119490483_119493846_119494018_119494952_119495151_119495431_119495574_119499019_119499084_119499408_119499601_119500586_119500679_119501183_119501313_119516945_119517027_119520509_119520629_119523121
ENSMUSG00000034533.11_119480003_119523391_1	chr9	-	2012	13	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	0	42012	0	-41978	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCATTGTGGTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	119523391	119480002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119480151_119487468_119487581_119490188_119490483_119493846_119494018_119494952_119495151_119495431_119495574_119499019_119499084_119499408_119499601_119500586_119500679_119501183_119501313_119516945_119517027_119520509_119520629_119523121
ENSMUSG00000034533.11_119480071_119523391_1	chr9	-	1944	13	ISM	ENSMUSG00000034533.11	ENSMUST00000214408.2	5877	27	0	42080	0	-42046	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTGGAAGAAATTCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	119523391	119480070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119480151_119487468_119487581_119490188_119490483_119493846_119494018_119494952_119495151_119495431_119495574_119499019_119499084_119499408_119499601_119500586_119500679_119501183_119501313_119516945_119517027_119520509_119520629_119523121
ENSMUSG00000034544.18_66888723_67262884_1	chr3	+	992	9	ISM	ENSMUSG00000034544.18	ENSMUST00000162036.8	1406	10	0	1008	0	-1007	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGGAAATAGACCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	66888722	67262884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_66888876_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806
ENSMUSG00000034544.18_66901847_67263893_1	chr3	+	1257	9	ISM	ENSMUSG00000034544.18	ENSMUST00000161726.2	3213	10	8547	1836	8547	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTGTTGAAATAAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	66901846	67263893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ENSMUSG00000034544.18_66903802_67264076_1	chr3	+	1237	8	ISM	ENSMUSG00000034544.18	ENSMUST00000161726.2	3213	10	10502	1653	10502	184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGGTATCATAAAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	66903801	67264076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ENSMUSG00000034544.18_66903849_67264132_1	chr3	+	1246	8	ISM	ENSMUSG00000034544.18	ENSMUST00000161726.2	3213	10	10549	1597	10549	240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCAACATGTTTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	66903848	67264132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ENSMUSG00000034544.18_67113765_67264403_1	chr3	+	1225	5	ISM	ENSMUSG00000034544.18	ENSMUST00000161726.2	3213	10	220465	1326	220465	511	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGCCTAACTTCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	67113764	67264403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ENSMUSG00000034544.18_67257298_67264590_1	chr3	+	1241	3	ISM	ENSMUSG00000034544.18	ENSMUST00000161726.2	3213	10	363998	1139	363998	698	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGTACTTCAGGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	67257297	67264590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67257349_67262806_67262960_67263553
ENSMUSG00000034544.18_67262879_67264699_1	chr3	+	1227	2	ISM	ENSMUSG00000034544.18	ENSMUST00000161726.2	3213	10	369579	1030	369579	807	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCCGGTAACCGTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	67262878	67264699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67262960_67263553
ENSMUSG00000034544.18_67262937_67264760_1	chr3	+	1230	2	ISM	ENSMUSG00000034544.18	ENSMUST00000161726.2	3213	10	369637	969	369637	868	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGAGACAGTTCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	67262936	67264760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67262960_67263553
ENSMUSG00000034560.7_83379805_83394774_1	chr10	+	1104	12	ISM	ENSMUSG00000034560.7	ENST00000620430.5	3555	33	-72	35329	0	-35329	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTATAAGTCTTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	83379804	83394774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681
ENSMUSG00000034560.7_83379925_83407271_1	chr10	+	1488	16	ISM	ENSMUSG00000034560.7	ENST00000332180.10	5626	34	85	25069	48	-22832	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAACACAGCACCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	83379924	83407271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216
ENSMUSG00000034560.7_83382706_83408010_1	chr10	+	1496	16	ISM	ENSMUSG00000034560.7	ENST00000332180.10	5626	34	2866	24330	2829	-22093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTGTTTTGGCTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	83382705	83408010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956
ENSMUSG00000034560.7_83390595_83410423_1	chr10	+	1578	14	ISM	ENSMUSG00000034560.7	ENST00000332180.10	5626	34	10755	21917	10718	-19680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGATTATATTGAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	83390594	83410423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306
ENSMUSG00000034560.7_83391904_83411973_1	chr10	+	1515	13	ISM	ENSMUSG00000034560.7	ENST00000332180.10	5626	34	12064	20367	12027	-18130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCAGGAAAGACTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	83391903	83411973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880
ENSMUSG00000034560.7_83392727_83412589_1	chr10	+	1505	13	ISM	ENSMUSG00000034560.7	ENST00000332180.10	5626	34	12887	19751	12850	-17514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCATGATTGGGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	83392726	83412589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538
ENSMUSG00000034560.7_83394460_83412693_1	chr10	+	1550	12	ISM	ENSMUSG00000034560.7	ENST00000332180.10	5626	34	14620	19647	14583	-17410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGCACAGTGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	83394459	83412693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538
ENSMUSG00000034560.7_83396277_83417189_1	chr10	+	1498	13	ISM	ENSMUSG00000034560.7	ENST00000332180.10	5626	34	16437	15151	16400	-12914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAATCCAGATTGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	83396276	83417189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120
ENSMUSG00000034560.7_83396329_83417250_1	chr10	+	1507	13	ISM	ENSMUSG00000034560.7	ENST00000332180.10	5626	34	16489	15090	16452	-12853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGTATGCTATGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	83396328	83417250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120
ENSMUSG00000034560.7_83400275_83419227_1	chr10	+	1559	13	ISM	ENSMUSG00000034560.7	ENST00000332180.10	5626	34	20435	13113	20398	-10876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCGCTTCCAGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	83400274	83419227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118
ENSMUSG00000034560.7_83405830_83422584_1	chr10	+	1588	14	ISM	ENSMUSG00000034560.7	ENST00000620430.5	3555	33	25953	7519	25953	-7519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACCTGATGAGTGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	83405829	83422584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497
ENSMUSG00000034560.7_83408225_83426920_1	chr10	+	1517	14	ISM	ENSMUSG00000034560.7	ENST00000620430.5	3555	33	28348	3183	28348	-3183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAGAAAAATACATAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	83408224	83426920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850
ENSMUSG00000034560.7_83409639_83427047_1	chr10	+	1568	13	ISM	ENSMUSG00000034560.7	ENST00000620430.5	3555	33	29762	3056	29762	-3056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGGATCTAAATGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	83409638	83427047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850
ENSMUSG00000034560.7_83410307_83427652_1	chr10	+	1561	13	ISM	ENSMUSG00000034560.7	ENST00000620430.5	3555	33	30430	2451	30430	-2451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGCGTGGTGTCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	83410306	83427652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552
ENSMUSG00000034560.7_83411879_83430103_1	chr10	+	1515	13	ISM	ENSMUSG00000034560.7	ENST00000620430.5	3555	33	32002	0	32002	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCAGTCGTCAGACGT	NA	NA	NA	NA	NA	NA	NA	NA	83411878	83430103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ENSMUSG00000034560.7_83419155_83430273_1	chr10	+	1008	8	ISM	ENSMUSG00000034560.7	ENST00000620430.5	3555	33	39278	-170	39278	170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACGGTAAGACTGGATC	NA	NA	NA	NA	NA	NA	NA	NA	83419154	83430273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ENSMUSG00000034560.7_83422560_83430527_1	chr10	+	1060	6	ISM	ENSMUSG00000034560.7	ENST00000620430.5	3555	33	42683	-424	42683	424	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGACTGTGTGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	83422559	83430527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ENSMUSG00000034560.7_83426238_83430737_1	chr10	+	1014	4	ISM	ENSMUSG00000034560.7	ENST00000620430.5	3555	33	46361	-634	46361	634	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTCAGATTAAGCCATA	NA	NA	NA	NA	NA	NA	NA	NA	83426237	83430737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83426252_83426850_83427048_83427552_83427653_83430034
ENSMUSG00000034560.7_83426938_83430868_1	chr10	+	1044	3	ISM	ENSMUSG00000034560.7	ENST00000620430.5	3555	33	47061	-765	47061	765	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTGGTGGCAGTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	83426937	83430868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83427048_83427552_83427653_83430034
ENSMUSG00000034560.7_83427013_83430908_1	chr10	+	1009	3	ISM	ENSMUSG00000034560.7	ENST00000620430.5	3555	33	47136	-805	47136	805	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATAATCTAAGATATAAG	NA	NA	NA	NA	NA	NA	NA	NA	83427012	83430908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83427048_83427552_83427653_83430034
ENSMUSG00000034560.7_83430930_83432132_1	chr10	+	1003	2	ISM	ENSMUSG00000034560.7	ENST00000332180.10	5626	34	51090	208	51053	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTAACATGAGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	83430929	83432132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83431755_83431954
ENSMUSG00000034560.7_83430966_83432217_1	chr10	+	1052	2	ISM	ENSMUSG00000034560.7	ENST00000332180.10	5626	34	51126	123	51089	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGTTCTGATTAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	83430965	83432217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83431755_83431954
ENSMUSG00000034560.7_83431118_83432337_1	chr10	+	1020	2	ISM	ENSMUSG00000034560.7	ENST00000332180.10	5626	34	51278	3	51241	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAAACTGTCCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	83431117	83432337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_83431755_83431954
ENSMUSG00000034563.17_72892711_72919259_1	chr9	+	1121	8	FSM	ENSMUSG00000034563.17	ENST00000310958.10	2537	8	45	1371	0	-1371	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTACCTTTGAAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	72892710	72919259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_72892956_72904683_72904753_72906305_72906421_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
ENSMUSG00000034563.17_72892860_72919548_1	chr9	+	1261	8	FSM	ENSMUSG00000034563.17	ENST00000310958.10	2537	8	194	1082	0	-1082	multi-exon	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTCACAGCCATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	72892859	72919548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_72892956_72904683_72904753_72906305_72906421_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
ENSMUSG00000034563.17_72906304_72919729_1	chr9	+	1279	6	ISM	ENSMUSG00000034563.17	ENST00000310958.10	2537	8	13638	901	13417	-901	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTGTACGTTGAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	72906303	72919729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72906421_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
ENSMUSG00000034563.17_72906743_72919729_1	chr9	+	1164	5	ISM	ENSMUSG00000034563.17	ENST00000310958.10	2537	8	14077	901	13856	-901	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTGTACGTTGAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	72906742	72919729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
ENSMUSG00000034563.17_72913090_72920155_1	chr9	+	1145	3	ISM	ENSMUSG00000034563.17	ENST00000310958.10	2537	8	20424	475	20203	-475	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGAGGGAGAGAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	72913089	72920155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72913175_72917578_72917695_72919211
ENSMUSG00000034563.17_72917607_72920293_1	chr9	+	1170	2	ISM	ENSMUSG00000034563.17	ENST00000310958.10	2537	8	24941	337	24720	-337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGAAGCCATTAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	72917606	72920293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72917695_72919211
ENSMUSG00000034563.17_72917675_72920361_1	chr9	+	1170	2	ISM	ENSMUSG00000034563.17	ENST00000310958.10	2537	8	25009	269	24788	-269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGTACTTACTCAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	72917674	72920361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72917695_72919211
ENSMUSG00000034563.17_72920127_72923166_1	chr9	+	1035	2	ISM	ENSMUSG00000034563.17	ENSMUST00000085350.11	2969	9	27240	116	27240	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGGTTCAAGAGCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	72920126	72923166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72920609_72922613
ENSMUSG00000034563.17_72920212_72923282_1	chr9	+	1066	2	ISM	ENSMUSG00000034563.17	ENSMUST00000085350.11	2969	9	27325	0	27325	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTCTCAAGTCTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	72920211	72923282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72920609_72922613
ENSMUSG00000034566.11_115306841_115310788_1	chr11	-	434	5	ISM	ENSMUSG00000034566.11	ENSMUST00000043931.9	625	6	0	326	0	-267	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGATGAGCCATGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	115310788	115306840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310717
ENSMUSG00000034566.11_115307679_115310788_1	chr11	-	371	4	ISM	ENSMUSG00000034566.11	ENSMUST00000043931.9	625	6	0	1164	0	-1105	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTAGTGCGTGGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	115310788	115307678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115307751_115308664_115308762_115309211_115309343_115310717
ENSMUSG00000034574.11_71998621_72024555_1	chr12	+	921	7	ISM	ENSMUSG00000034574.11	ENSMUST00000221317.2	5790	25	62117	14544	62117	-14544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGCGGATACCAAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	71998620	72024555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416
ENSMUSG00000034574.11_72006638_72035759_1	chr12	+	900	9	ISM	ENSMUSG00000034574.11	ENSMUST00000221317.2	5790	25	70134	3340	70134	-3340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAAACAGGAAAATGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	72006637	72035759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659
ENSMUSG00000034574.11_72024441_72036745_1	chr12	+	910	6	ISM	ENSMUSG00000034574.11	ENSMUST00000221317.2	5790	25	87937	2354	87937	-2354	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGGCAATTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	72024440	72036745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ENSMUSG00000034574.11_72032511_72037098_1	chr12	+	895	3	ISM	ENSMUSG00000034574.11	ENSMUST00000221317.2	5790	25	96007	2001	96007	-2001	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTGAGACGATTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	72032510	72037098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72032589_72035659_72035831_72036452
ENSMUSG00000034574.11_72035694_72037251_1	chr12	+	936	2	ISM	ENSMUSG00000034574.11	ENSMUST00000221317.2	5790	25	99190	1848	99190	-1848	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTACAAACGTCTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	72035693	72037251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_72035831_72036452
ENSMUSG00000034579.18_3438299_3441927_1	chr11	+	1143	5	ISM	ENSMUSG00000034579.18	ENST00000215885.4	1949	7	94	1539	15	-1539	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGTGAGCACCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	3438298	3441927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3438854_3439761_3439895_3440142_3440278_3440806_3441091_3441891
ENSMUSG00000034579.18_3438299_3441957_1	chr11	+	1167	5	NNC	ENSMUSG00000034579.18	novel	1949	7	NA	NA	15	-1509	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAAGTTCCACCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	3438298	3441957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_3438854_3439761_3439895_3440142_3440278_3440812_3441091_3441891
ENSMUSG00000034579.18_3438424_3441974_1	chr11	+	1065	5	ISM	ENSMUSG00000034579.18	ENST00000215885.4	1949	7	219	1492	140	-1492	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACAGTGCCCAGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	3438423	3441974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3438854_3439761_3439895_3440142_3440278_3440806_3441091_3441891
ENSMUSG00000034579.18_3438479_3442021_1	chr11	+	1057	5	ISM	ENSMUSG00000034579.18	ENST00000215885.4	1949	7	274	1445	195	-1445	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCCTCCTGGGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	3438478	3442021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3438854_3439761_3439895_3440142_3440278_3440806_3441091_3441891
ENSMUSG00000034579.18_3438746_3443152_1	chr11	+	1090	7	FSM	ENSMUSG00000034579.18	ENSMUST00000064265.13	2566	7	462	1014	462	-314	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGGGACAGAAGAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	3438745	3443152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_3438854_3439761_3439895_3440142_3440278_3440806_3441091_3441891_3442022_3442125_3442243_3442969
ENSMUSG00000034579.18_3440140_3443468_1	chr11	+	1168	5	ISM	ENSMUSG00000034579.18	ENSMUST00000064265.13	2566	7	1856	698	1856	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGTGGCTGATTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	3440139	3443468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3440278_3440806_3441091_3441891_3442022_3442125_3442243_3442969
ENSMUSG00000034586.15_115238533_115243534_1	chr11	-	1617	7	ISM	ENSMUSG00000034586.15	ENSMUST00000044152.13	3236	19	15011	0	15011	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTGTCTCTGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	115243534	115238532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115239359_115239625_115239785_115239911_115240004_115240747_115240829_115241317_115241425_115241744_115241973_115243410
ENSMUSG00000034586.15_115239019_115246213_1	chr11	-	1588	11	ISM	ENSMUSG00000034586.15	ENSMUST00000044152.13	3236	19	12332	486	12332	-486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCCCTTGTGCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	115246213	115239018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115239359_115239625_115239785_115239911_115240004_115240747_115240829_115241317_115241425_115241744_115241973_115243410_115243576_115245225_115245305_115245411_115245564_115245850_115245942_115246119
ENSMUSG00000034595.18_36176948_36186214_1	chr17	+	2469	4	FSM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	0	274	0	-170	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGAGAGTGACTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	36176947	36186214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_36177121_36178121_36179678_36184617_36184832_36185688
ENSMUSG00000034595.18_36176948_36186384_1	chr17	+	2639	4	FSM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	0	104	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCTAAGGAAGTGCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	36176947	36186384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_36177121_36178121_36179678_36184617_36184832_36185688
ENSMUSG00000034595.18_36177081_36186384_1	chr17	+	2506	4	FSM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	133	104	133	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCTAAGGAAGTGCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	36177080	36186384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_36177121_36178121_36179678_36184617_36184832_36185688
ENSMUSG00000034612.8_82821573_82927991_1	chr10	+	318	2	FSM	ENSMUSG00000034612.8	ENST00000546689.1	589	2	271	0	241	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCCCGGTCCTCGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	82821572	82927991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_82821802_82927902
ENSMUSG00000034614.15_3280728_3291797_1	chr11	+	1072	6	FSM	ENSMUSG00000034614.15	ENSMUST00000045153.11	2573	6	327	1174	-17	-555	multi-exon	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACATTTTGTGTTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	3280727	3291797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_3281005_3281914_3282032_3282108_3282229_3283208_3283413_3283504_3283584_3291522
ENSMUSG00000034614.15_3281913_3282228_1	chr11	+	243	2	ISM	ENSMUSG00000034614.15	ENST00000441972.5	1535	5	1168	10124	1105	-1736	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTCGCCCTGGGACCACG	NA	NA	NA	NA	NA	NA	NA	NA	3281912	3282228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3282036_3282108
ENSMUSG00000034614.15_3281954_3292182_1	chr11	+	1141	5	ISM	ENSMUSG00000034614.15	ENSMUST00000045153.11	2573	6	1553	789	1146	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATGAAAGAAATATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	3281953	3292182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3282032_3282108_3282229_3283208_3283413_3283504_3283584_3291522
ENSMUSG00000034614.15_3282109_3283342_1	chr11	+	254	2	ISM	ENSMUSG00000034614.15	ENSMUST00000093399.11	1098	5	1301	622	1301	-622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCAGTGATCGGGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	3282108	3283342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3282229_3283208
ENSMUSG00000034614.15_3282109_3292302_1	chr11	+	1183	4	ISM	ENSMUSG00000034614.15	ENSMUST00000045153.11	2573	6	1708	669	1301	-50	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTATCTCGTAAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	3282108	3292302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3282229_3283208_3283413_3283504_3283584_3291522
ENSMUSG00000034614.15_3283288_3292444_1	chr11	+	1126	3	ISM	ENSMUSG00000034614.15	ENSMUST00000045153.11	2573	6	2887	527	2480	92	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCTGATAAGAAAATAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	3283287	3292444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3283413_3283504_3283584_3291522
ENSMUSG00000034614.15_3283320_3291683_1	chr11	+	254	2	ISM	ENSMUSG00000034614.15	ENST00000441972.5	1535	5	2575	669	2512	-669	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCACCCTCCTCACGGGC	NA	NA	NA	NA	NA	NA	NA	NA	3283319	3291683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3283413_3291522
ENSMUSG00000034614.15_3283329_3292510_1	chr11	+	1151	3	ISM	ENSMUSG00000034614.15	ENSMUST00000045153.11	2573	6	2928	461	2521	158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAGCTTGGAGACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	3283328	3292510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3283413_3283504_3283584_3291522
ENSMUSG00000034614.15_3283527_3292612_1	chr11	+	1147	2	ISM	ENSMUSG00000034614.15	ENSMUST00000045153.11	2573	6	3126	359	2719	260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGGTACAAAACAATCACT	NA	NA	NA	NA	NA	NA	NA	NA	3283526	3292612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3283584_3291522
ENSMUSG00000034620.18_121916616_121924811_1	chr10	-	1007	2	ISM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	8465	2597	8465	-2597	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAACTAACTGGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	121924811	121916615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121917595_121924783
ENSMUSG00000034620.18_121916679_121924870_1	chr10	-	1003	2	ISM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	8406	2660	8406	-2660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACATTCTTCTGTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	121924870	121916678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121917595_121924783
ENSMUSG00000034620.18_121916738_121924923_1	chr10	-	997	2	ISM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	8353	2719	8353	-2719	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGCATATAACCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	121924923	121916737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121917595_121924783
ENSMUSG00000034620.18_121916932_121926610_1	chr10	-	1080	3	ISM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	6666	2913	6666	-2913	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTCACGACTGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	121926610	121916931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121917595_121924783_121924955_121926364
ENSMUSG00000034620.18_121917165_121931871_1	chr10	-	1047	5	ISM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	1405	3146	1405	-3146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTATTCATAAGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	121931871	121917164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843
ENSMUSG00000034620.18_121917336_121932041_1	chr10	-	1046	5	ISM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	1235	3317	1235	-3317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCTGCTATTTTAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	121932041	121917335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843
ENSMUSG00000034620.18_121917587_121933031_1	chr10	-	980	6	FSM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	245	3568	245	-3568	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGGAGACAAATGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	121933031	121917586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
ENSMUSG00000034636.10_108094619_108117176_1	chr4	-	938	10	ISM	ENSMUSG00000034636.10	ENST00000545132.5	2213	13	41065	89	41065	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTACTTGGCTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	108117176	108094618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108094637_108099017_108099071_108099196_108099395_108101886_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146
ENSMUSG00000034636.10_108099239_108123042_1	chr4	-	964	9	ISM	ENSMUSG00000034636.10	ENST00000545132.5	2213	13	35199	4709	35199	-4709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGAGCCGAAGCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	108123042	108099238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108099395_108101886_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014
ENSMUSG00000034636.10_108099304_108123093_1	chr4	-	950	9	ISM	ENSMUSG00000034636.10	ENST00000545132.5	2213	13	35148	4774	35148	-4774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTCAGTTACTTCGCA	NA	NA	NA	NA	NA	NA	NA	NA	108123093	108099303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108099395_108101886_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014
ENSMUSG00000034636.10_108099349_108123169_1	chr4	-	981	9	ISM	ENSMUSG00000034636.10	ENST00000545132.5	2213	13	35072	4819	35072	-4819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATTTTATAGACCACATC	NA	NA	NA	NA	NA	NA	NA	NA	108123169	108099348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108099395_108101886_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014
ENSMUSG00000034636.10_108102155_108123367_1	chr4	-	967	7	ISM	ENSMUSG00000034636.10	ENST00000545132.5	2213	13	34874	7625	34874	-7625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTCACAGATGAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	108123367	108102154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014
ENSMUSG00000034636.10_108102200_108123430_1	chr4	-	985	7	ISM	ENSMUSG00000034636.10	ENST00000545132.5	2213	13	34811	7670	34811	-7670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCCGTGGACACTACGT	NA	NA	NA	NA	NA	NA	NA	NA	108123430	108102199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014
ENSMUSG00000034636.10_108108054_108123568_1	chr4	-	954	5	ISM	ENSMUSG00000034636.10	ENST00000545132.5	2213	13	34673	13524	34673	-13524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCATGCAGTGGCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	108123568	108108053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014
ENSMUSG00000034636.10_108112494_108123740_1	chr4	-	948	3	ISM	ENSMUSG00000034636.10	ENST00000545132.5	2213	13	34501	17964	34501	-17964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGACCTTGCTTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	108123740	108112493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108112575_108117146_108117288_108123014
ENSMUSG00000034636.10_108117212_108129539_1	chr4	-	956	3	ISM	ENSMUSG00000034636.10	ENST00000545132.5	2213	13	28702	22682	28702	-22682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTGTTTCATCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	108129539	108117211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108117288_108123014_108123770_108129414
ENSMUSG00000034636.10_108123034_108158138_1	chr4	-	953	3	ISM	ENSMUSG00000034636.10	ENST00000545132.5	2213	13	103	28504	103	-28504	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAAAGGACACTTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	108158138	108123033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108123770_108129414_108129581_108158087
ENSMUSG00000034636.10_108123087_108158293_1	chr4	-	1055	3	ISM	ENSMUSG00000034636.10	ENST00000545132.5	2213	13	-52	28557	0	-28557	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTTCGTAGGGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	108158293	108123086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108123770_108129414_108129581_108158087
ENSMUSG00000034640.10_65439426_65455018_1	chr3	+	422	3	ISM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	3595	7921	3595	-7921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATATTCTCCACAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	65439425	65455018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_65439606_65453627_65453797_65454945
ENSMUSG00000034640.10_65453692_65460089_1	chr3	+	399	3	ISM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	17861	2850	17861	-2850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATCCAAGTGCCTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	65453691	65460089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_65453797_65454945_65455107_65459956
ENSMUSG00000034640.10_65460096_65460806_1	chr3	+	405	2	ISM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	24265	2133	24265	-2133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGTCATGGCATGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	65460095	65460806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_65460233_65460538
ENSMUSG00000034645.15_108044513_108046796_1	chr4	-	195	3	ISM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	20624	3666	20624	-3666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGCCCACCTGACATGTG	NA	NA	NA	NA	NA	NA	NA	NA	108046796	108044512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108044632_108046643_108046689_108046765
ENSMUSG00000034645.15_108044566_108046846_1	chr4	-	192	3	ISM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	20574	3719	20574	-3719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCTTGCTCCACAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	108046846	108044565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108044632_108046643_108046689_108046765
ENSMUSG00000034645.15_108044618_108046897_1	chr4	-	191	3	ISM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	20523	3771	20523	-3771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCGAGAGCTCTCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	108046897	108044617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108044632_108046643_108046689_108046765
ENSMUSG00000034645.15_108046858_108049302_1	chr4	-	178	3	ISM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	18118	6011	18118	-6011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACTTTGGAATCTTACG	NA	NA	NA	NA	NA	NA	NA	NA	108049302	108046857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108046928_108049106_108049161_108049248
ENSMUSG00000034645.15_108046913_108051201_1	chr4	-	191	4	ISM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	16219	6066	16219	-6066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGACAAAAGCTGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	108051201	108046912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108046928_108049106_108049161_108049248_108049349_108051179
ENSMUSG00000034645.15_108049296_108053407_1	chr4	-	185	3	ISM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	14013	8449	14013	-8449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCGAACAATGGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	108053407	108049295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108049349_108051179_108051245_108053340
ENSMUSG00000034645.15_108053377_108058422_1	chr4	-	174	2	ISM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	8998	12530	8998	-12530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAAAGCAACGAAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	108058422	108053376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108053518_108058389
ENSMUSG00000034645.15_108053416_108058486_1	chr4	-	199	2	ISM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	8934	12569	8934	-12569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGTTCGTCTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	108058486	108053415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108053518_108058389
ENSMUSG00000034645.15_108053479_108058527_1	chr4	-	177	2	ISM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	8893	12632	8893	-12632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGCAGTTCACAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	108058527	108053478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108053518_108058389
ENSMUSG00000034645.15_108058390_108067269_1	chr4	-	158	2	ISM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	151	17543	151	-17543	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTTAGGCTGTATCATG	NA	NA	NA	NA	NA	NA	NA	NA	108067269	108058389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108058531_108067252
ENSMUSG00000034645.15_108058419_108067342_1	chr4	-	202	2	ISM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	78	17572	78	-17572	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGTGCTGTCCTGCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	108067342	108058418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108058531_108067252
ENSMUSG00000034645.15_108058489_108067376_1	chr4	-	166	2	ISM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	44	17642	44	-17642	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGTTACCGGAACAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	108067376	108058488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_108058531_108067252
ENSMUSG00000034659.15_10848250_10850023_1	chr19	-	1337	2	ISM	ENSMUSG00000034659.15	ENSMUST00000038128.15	2188	4	9342	226	9342	-226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACCACTTGCTCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	10850023	10848249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_10849514_10849950
ENSMUSG00000034659.15_10848398_10851850_1	chr19	-	1464	3	ISM	ENSMUSG00000034659.15	ENSMUST00000038128.15	2188	4	7515	374	7515	-374	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTGCTGTCTTGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	10851850	10848397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_10849514_10849950_10850054_10851605
ENSMUSG00000034659.15_10848527_10859062_1	chr19	-	1382	4	FSM	ENSMUSG00000034659.15	ENSMUST00000038128.15	2188	4	303	503	303	-503	multi-exon	FALSE	canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGTGGCTACTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	10859062	10848526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_10849514_10849950_10850054_10851605_10851851_10859015
ENSMUSG00000034659.15_10848644_10859201_1	chr19	-	1404	4	FSM	ENSMUSG00000034659.15	ENSMUST00000038128.15	2188	4	164	620	164	-620	multi-exon	FALSE	canonical	NA	NA	NA	NA	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGAAGGGGGAGGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	10859201	10848643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_10849514_10849950_10850054_10851605_10851851_10859015
ENSMUSG00000034667.9_121439098_121443018_1	chr10	-	761	6	ISM	ENSMUSG00000034667.9	ENSMUST00000039810.8	5992	25	19203	15813	19203	-15813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGAAGTGGTGTGCGGACC	NA	NA	NA	NA	NA	NA	NA	NA	121443018	121439097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903
ENSMUSG00000034674.19_82465693_82485751_1	chr10	+	2620	10	FSM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	0	882	0	-407	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTTCTTTTTCCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	82465692	82485751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ENSMUSG00000034674.19_82465710_82485806_1	chr10	+	2658	10	FSM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	17	827	17	-352	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCACTGCACTGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	82465709	82485806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ENSMUSG00000034674.19_82465710_82485864_1	chr10	+	2716	10	FSM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	17	769	17	-294	multi-exon	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAGGGATTAGGATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	82465709	82485864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ENSMUSG00000034674.19_82477147_82486158_1	chr10	+	2674	8	ISM	ENSMUSG00000034674.19	ENSMUST00000092266.11	2959	10	11485	0	11454	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTAGTATACAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	82477146	82486158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ENSMUSG00000034674.19_82477275_82486175_1	chr10	+	2558	8	NNC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	11582	17	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTCCAGCAGGATTTA	NA	NA	NA	NA	NA	NA	NA	NA	82477274	82486175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_82477392_82477854_82477925_82480008_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ENSMUSG00000034674.19_82477855_82486374_1	chr10	+	2645	7	ISM	ENSMUSG00000034674.19	ENSMUST00000092266.11	2959	10	12193	-216	12162	216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGCCCAGGCCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	82477854	82486374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ENSMUSG00000034674.19_82480272_82486634_1	chr10	+	2709	5	NNC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	14579	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGCTAACTTGTTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	82480271	82486634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484414
ENSMUSG00000034675.18_55621242_55622299_1	chr13	-	896	2	ISM	ENSMUSG00000034675.18	ENSMUST00000109923.9	2940	14	13625	0	13575	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGGCCTGCTGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	55622299	55621241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55622107_55622268
ENSMUSG00000034675.18_55621242_55630110_1	chr13	-	2585	11	ISM	ENSMUSG00000034675.18	ENSMUST00000021950.15	3078	15	5814	0	5764	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGGCCTGCTGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	55630110	55621241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55622107_55622268_55622372_55622672_55623350_55623958_55624130_55624448_55624587_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963
ENSMUSG00000034675.18_55621375_55622348_1	chr13	-	812	2	ISM	ENSMUSG00000034675.18	ENSMUST00000109923.9	2940	14	13576	133	13526	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGGGTGGCCCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	55622348	55621374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55622107_55622268
ENSMUSG00000034675.18_55622672_55624132_1	chr13	-	852	2	ISM	ENSMUSG00000034675.18	ENSMUST00000109921.9	2378	14	11742	915	11742	-915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACAGGGGGAGCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	55624132	55622671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55623350_55623958
ENSMUSG00000034675.18_55622938_55629405_1	chr13	-	891	6	ISM	ENSMUSG00000034675.18	ENSMUST00000109921.9	2378	14	6469	1181	6469	-1181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCCCTGCTGAATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	55629405	55622937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351
ENSMUSG00000034675.18_55623298_55630070_1	chr13	-	814	8	ISM	ENSMUSG00000034675.18	ENSMUST00000109921.9	2378	14	5804	1541	5804	-1541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAACAGCAGCTCCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	55630070	55623297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963
ENSMUSG00000034675.18_55623959_55630300_1	chr13	-	877	8	ISM	ENSMUSG00000034675.18	ENSMUST00000109921.9	2378	14	5574	2202	5574	-2202	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGAAGGGCCCCACCG	NA	NA	NA	NA	NA	NA	NA	NA	55630300	55623958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225
ENSMUSG00000034675.18_55625418_55635706_1	chr13	-	852	10	ISM	ENSMUSG00000034675.18	ENSMUST00000109921.9	2378	14	168	3661	168	-3661	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGGTGGCAGCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	55635706	55625417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
ENSMUSG00000034675.18_55629191_55635874_1	chr13	-	855	8	ISM	ENSMUSG00000034675.18	ENSMUST00000109921.9	2378	14	0	7434	0	-7434	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGAGGTTAAAGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	55635874	55629190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
ENSMUSG00000034681.18_24633649_24644229_1	chr17	+	977	7	FSM	ENSMUSG00000034681.18	ENSMUST00000115371.9	1646	7	29	640	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGGTCTGTAGAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	24633648	24644229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_24633709_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUSG00000034681.18_24634264_24644869_1	chr17	+	1979	8	FSM	ENSMUSG00000034681.18	ENST00000565678.5	2050	8	88	-17	88	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	24634263	24644869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_24634505_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUSG00000034681.18_24634314_24644869_1	chr17	+	1929	8	FSM	ENSMUSG00000034681.18	ENST00000565678.5	2050	8	138	-17	138	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	24634313	24644869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_24634505_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUSG00000034681.18_24634346_24639305_1	chr17	+	588	4	ISM	ENSMUSG00000034681.18	ENST00000568631.5	1393	8	170	4924	170	-4924	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCTCCGGCTCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	24634345	24639305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24634471_24637011_24637193_24637430_24637587_24639179
ENSMUSG00000034681.18_24634410_24644869_1	chr17	+	1833	8	FSM	ENSMUSG00000034681.18	ENST00000565678.5	2050	8	234	-17	234	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	24634409	24644869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_24634505_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUSG00000034683.13_79538266_79646652_1	chr2	+	1033	6	NNC	ENSMUSG00000034683.13	novel	1022	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	3535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGAGCTCCAGAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	79538265	79646652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_79538599_79540247_79540304_79586797_79586833_79589954_79590016_79638645_79638745_79646203
ENSMUSG00000034683.13_79538266_79646652_2	chr2	+	1018	5	NNC	ENSMUSG00000034683.13	novel	1022	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGAGCTCCAGAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	79538265	79646652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_79538599_79540242_79540319_79589954_79590016_79638645_79638745_79646203
ENSMUSG00000034683.13_79538266_79646652_3	chr2	+	1038	6	FSM	ENSMUSG00000034683.13	ENST00000409137.7	1022	6	-16	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGAGCTCCAGAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	79538265	79646652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_79538599_79540242_79540304_79586797_79586833_79589954_79590016_79638645_79638745_79646203
ENSMUSG00000034683.13_79538406_79646318_1	chr2	+	585	6	FSM	ENSMUSG00000034683.13	ENST00000280295.7	1035	6	116	334	116	-334	multi-exon	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACTCTTGACAGCCGAC	NA	NA	NA	NA	NA	NA	NA	NA	79538405	79646318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_79538599_79540221_79540304_79586797_79586833_79589954_79590016_79638645_79638745_79646203
ENSMUSG00000034683.13_79538406_79646400_1	chr2	+	647	5	NNC	ENSMUSG00000034683.13	novel	1035	6	NA	NA	116	-252	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTATTATTATTTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	79538405	79646400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_79538599_79540221_79540319_79589954_79590016_79638645_79638745_79646203
ENSMUSG00000034683.13_79538406_79646524_1	chr2	+	771	5	NNC	ENSMUSG00000034683.13	novel	1035	6	NA	NA	116	-128	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGAAACCTGAGACGTC	NA	NA	NA	NA	NA	NA	NA	NA	79538405	79646524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_79538599_79540221_79540319_79589954_79590016_79638645_79638745_79646203
ENSMUSG00000034684.13_107559414_107568629_1	chr9	-	2098	14	ISM	ENSMUSG00000034684.13	ENSMUST00000192727.6	2383	18	14126	-203	14126	203	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCCGGCCTAGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	107568629	107559413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107560039_107560758_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107568554
ENSMUSG00000034684.13_107559892_107582755_1	chr9	-	2108	18	FSM	ENSMUSG00000034684.13	ENSMUST00000192727.6	2383	18	0	275	0	-275	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGATGCCGTCCATGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	107582755	107559891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_107560039_107560758_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107568554_107568648_107569366_107569487_107569587_107569651_107569754_107569916_107582629
ENSMUSG00000034706.17_114623721_114641249_1	chr11	+	1091	8	ISM	ENSMUSG00000034706.17	ENST00000582036.5	1667	11	-16	4018	-16	-4018	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTTTATGGCCACCACG	NA	NA	NA	NA	NA	NA	NA	NA	114623720	114641249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114623922_114625353_114625516_114626690_114626813_114629441_114629585_114631242_114631357_114635126_114635267_114635880_114636004_114641163
ENSMUSG00000034706.17_114623907_114642631_1	chr11	+	1063	9	ISM	ENSMUSG00000034706.17	ENST00000582036.5	1667	11	170	2636	170	-2636	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGATGGAGCCTGGAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	114623906	114642631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114623922_114625353_114625516_114626690_114626813_114629441_114629585_114631242_114631357_114635126_114635267_114635880_114636004_114641163_114641388_114642611
ENSMUSG00000034706.17_114625409_114642697_1	chr11	+	1059	8	ISM	ENSMUSG00000034706.17	ENST00000582036.5	1667	11	1672	2570	1672	-2570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGGGACTTGGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	114625408	114642697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114625516_114626690_114626813_114629441_114629585_114631242_114631357_114635126_114635267_114635880_114636004_114641163_114641388_114642611
ENSMUSG00000034706.17_114625462_114643737_1	chr11	+	1075	9	ISM	ENSMUSG00000034706.17	ENST00000582036.5	1667	11	1725	1530	1725	-1530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGCTCCGAGCTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	114625461	114643737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114625516_114626690_114626813_114629441_114629585_114631242_114631357_114635126_114635267_114635880_114636004_114641163_114641388_114642611_114642748_114643718
ENSMUSG00000034706.17_114626769_114645178_1	chr11	+	1153	9	ISM	ENSMUSG00000034706.17	ENST00000582036.5	1667	11	3032	89	3032	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGGACCTTGATGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	114626768	114645178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114626813_114629441_114629585_114631242_114631357_114635126_114635267_114635880_114636004_114641163_114641388_114642611_114642748_114643718_114643830_114645060
ENSMUSG00000034706.17_114629484_114645178_1	chr11	+	1067	8	ISM	ENSMUSG00000034706.17	ENST00000582036.5	1667	11	5747	89	5747	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGGACCTTGATGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	114629483	114645178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114629585_114631242_114631357_114635126_114635267_114635880_114636004_114641163_114641388_114642611_114642748_114643718_114643830_114645060
ENSMUSG00000034706.17_114631242_114645288_1	chr11	+	1077	7	ISM	ENSMUSG00000034706.17	ENST00000582036.5	1667	11	7505	-21	7505	21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCACCTCGGCAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	114631241	114645288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114631357_114635126_114635267_114635880_114636004_114641163_114641388_114642611_114642748_114643718_114643830_114645060
ENSMUSG00000034707.8_121200995_121232528_1	chr10	+	3233	14	FSM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	0	622	0	-622	multi-exon	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCTCTACCCACAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	121200994	121232528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_121201264_121207048_121207109_121210262_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ENSMUSG00000034707.8_121201189_121232660_1	chr10	+	3171	14	FSM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	194	490	194	-490	multi-exon	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATGCAGGGACTTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	121201188	121232660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_121201264_121207048_121207109_121210262_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ENSMUSG00000034707.8_121210248_121232891_1	chr10	+	3282	12	ISM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	9253	259	9253	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCTAATGGAAGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	121210247	121232891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ENSMUSG00000034707.8_121212123_121233025_1	chr10	+	3184	11	ISM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	11128	125	11128	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCAGCTGTTGTAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	121212122	121233025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ENSMUSG00000034707.8_121212540_121233151_1	chr10	+	3255	10	ISM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	11545	-1	11545	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCAATGTGTCCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	121212539	121233151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ENSMUSG00000034708.13_102321148_102326317_1	chr11	+	1399	10	ISM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	0	1316	0	-752	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	848	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACATAGAAAGGGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	102321147	102326317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071
ENSMUSG00000034708.13_102321344_102326635_1	chr11	+	1304	11	ISM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	196	998	196	-434	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	957	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATACCTGCCCGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	102321343	102326635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534
ENSMUSG00000034708.13_102323789_102326770_1	chr11	+	1418	10	ISM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	2641	863	-975	-299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTCCACCCCACCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	102323788	102326770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534
ENSMUSG00000034708.13_102323789_102326902_1	chr11	+	1469	11	ISM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	2641	731	-975	-167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGGCGAGGACCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	102323788	102326902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849
ENSMUSG00000034708.13_102324326_102327209_1	chr11	+	1403	10	ISM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	3178	424	-438	140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGCCAGGGGAACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	102324325	102327209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ENSMUSG00000034708.13_102324925_102326902_1	chr11	+	564	5	ISM	ENSMUSG00000034708.13	ENST00000639447.1	796	6	161	167	161	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGGCGAGGACCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	102324924	102326902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326849
ENSMUSG00000034708.13_102324925_102327399_1	chr11	+	1455	8	ISM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	3777	234	161	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCTACTCATCCTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	102324924	102327399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ENSMUSG00000034708.13_102325223_102327073_1	chr11	+	559	4	ISM	ENSMUSG00000034708.13	ENST00000639447.1	796	6	459	-4	459	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGTGTGACCCTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	102325222	102327073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102325336_102325528_102325653_102325884_102325983_102326849
ENSMUSG00000034708.13_102325238_102327633_1	chr11	+	1498	7	ISM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	4090	0	474	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	102325237	102327633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ENSMUSG00000034709.9_88837644_88856952_1	chr17	+	452	5	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	124	38596	98	-38596	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGCGGAGCTGAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	88837643	88856952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921
ENSMUSG00000034709.9_88837644_88857004_1	chr17	+	504	5	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	124	38544	98	-38544	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCAAGCTGTGATCGACG	NA	NA	NA	NA	NA	NA	NA	NA	88837643	88857004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921
ENSMUSG00000034709.9_88837644_88857056_1	chr17	+	556	5	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	124	38492	98	-38492	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCCAGAGCGACAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	88837643	88857056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921
ENSMUSG00000034709.9_88855036_88863073_1	chr17	+	498	6	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	17516	32475	17490	-32475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTTCACACCTATACA	NA	NA	NA	NA	NA	NA	NA	NA	88855035	88863073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009
ENSMUSG00000034709.9_88857005_88866078_1	chr17	+	501	6	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	19485	29470	19459	-29470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTCGAGAGCATTACAG	NA	NA	NA	NA	NA	NA	NA	NA	88857004	88866078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016
ENSMUSG00000034709.9_88857219_88866293_1	chr17	+	548	6	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	19699	29255	19673	-29255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCATTCCCCTAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	88857218	88866293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204
ENSMUSG00000034709.9_88858089_88866293_1	chr17	+	490	5	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	20569	29255	20543	-29255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCATTCCCCTAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	88858088	88866293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204
ENSMUSG00000034709.9_88858132_88869581_1	chr17	+	492	6	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	20612	25967	20586	-25967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGGAACCTGGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	88858131	88869581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536
ENSMUSG00000034709.9_88866015_88876635_1	chr17	+	551	5	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	28495	18913	28469	-18913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTGCTGATCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	88866014	88876635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507
ENSMUSG00000034709.9_88866240_88880105_1	chr17	+	487	5	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	28720	15443	28694	-15443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTAGTCCCCTTTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	88866239	88880105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030
ENSMUSG00000034709.9_88873084_88884636_1	chr17	+	523	5	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	35564	10912	35538	-10912	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCAAAATCAAGCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	88873083	88884636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565
ENSMUSG00000034709.9_88873106_88884646_1	chr17	+	418	4	ISM	ENSMUSG00000034709.9	ENST00000449090.6	2794	20	35586	10902	35560	-10902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCTGGAGAAAGAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	88873105	88884646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88873162_88876507_88876636_88880030_88880184_88884565
ENSMUSG00000034709.9_88876489_88884752_1	chr17	+	580	4	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	38969	10796	38943	-10796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGAGGAGGCTGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	88876488	88884752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88876636_88880030_88880184_88882619_88882713_88884565
ENSMUSG00000034709.9_88876550_88884752_1	chr17	+	519	4	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	39030	10796	39004	-10796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGAGGAGGCTGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	88876549	88884752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88876636_88880030_88880184_88882619_88882713_88884565
ENSMUSG00000034709.9_88876595_88884781_1	chr17	+	503	4	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	39075	10767	39049	-10767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGCCTGTGCAGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	88876594	88884781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88876636_88880030_88880184_88882619_88882713_88884565
ENSMUSG00000034709.9_88880115_88887950_1	chr17	+	493	4	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	42595	7598	42569	-7598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTAAGTCAGTGCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	88880114	88887950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88880184_88882619_88882713_88884565_88884809_88887862
ENSMUSG00000034709.9_88880159_88889868_1	chr17	+	411	4	ISM	ENSMUSG00000034709.9	ENST00000449090.6	2794	20	42639	5680	42613	-5680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCGGAGAAGTCGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	88880158	88889868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88880184_88884565_88884809_88887862_88887980_88889842
ENSMUSG00000034709.9_88882622_88889942_1	chr17	+	551	4	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	45102	5606	45076	-5606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCCTTCATGTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	88882621	88889942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88882713_88884565_88884809_88887862_88887980_88889842
ENSMUSG00000034709.9_88884619_88891295_1	chr17	+	421	4	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	47099	4253	47073	-4253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGCGGAGCTACGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	88884618	88891295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88884809_88887862_88887980_88889842_88889942_88891280
ENSMUSG00000034709.9_88884729_88895193_1	chr17	+	507	5	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	47209	355	47183	-355	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCCACAGCCAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	88884728	88895193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88884809_88887862_88887980_88889842_88889942_88891280_88891410_88895111
ENSMUSG00000034709.9_88887914_88895314_1	chr17	+	497	4	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	50394	234	50368	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCCCATGTTGACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	88887913	88895314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88887980_88889842_88889942_88891280_88891410_88895111
ENSMUSG00000034709.9_88889841_88895430_1	chr17	+	549	3	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	52321	118	52295	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACAACAAATATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	88889840	88895430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_88889942_88891280_88891410_88895111
ENSMUSG00000034714.10_114566342_114601725_1	chr11	+	1376	12	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	85	10078	85	-10078	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAGTTTCTGCAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	114566341	114601725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636
ENSMUSG00000034714.10_114566342_114601783_1	chr11	+	1434	12	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	85	10020	85	-10020	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCAGACCATCTCCAATG	NA	NA	NA	NA	NA	NA	NA	NA	114566341	114601783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636
ENSMUSG00000034714.10_114566452_114601822_1	chr11	+	1363	12	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	195	9981	195	-9981	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGCACAGTGGGGCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	114566451	114601822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636
ENSMUSG00000034714.10_114577252_114610009_1	chr11	+	1418	13	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	10995	1794	10995	-1794	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGAGTTCCCGTCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	114577251	114610009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ENSMUSG00000034714.10_114577308_114610059_1	chr11	+	1412	13	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	11051	1744	11051	-1744	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGGTTCTCAGCAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	114577307	114610059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ENSMUSG00000034714.10_114577347_114610128_1	chr11	+	1442	13	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	11090	1675	11090	-1675	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGCTCCTGTGGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	114577346	114610128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ENSMUSG00000034714.10_114587494_114610341_1	chr11	+	1418	11	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	21237	1462	21237	-1462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTAAAGGCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	114587493	114610341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ENSMUSG00000034714.10_114587569_114610402_1	chr11	+	1404	11	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	21312	1401	21312	-1401	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCCACACCCTCCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	114587568	114610402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ENSMUSG00000034714.10_114592610_114610515_1	chr11	+	1447	10	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	26353	1288	26353	-1288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATGCCAGAAGGACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	114592609	114610515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ENSMUSG00000034714.10_114599250_114610808_1	chr11	+	1441	6	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	32993	995	32993	-995	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTCTACTGTGGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	114599249	114610808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ENSMUSG00000034714.10_114601635_114611156_1	chr11	+	1469	3	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	35378	647	35378	-647	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCAGGATTAAAGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	114601634	114611156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114601823_114602585_114602665_114609954
ENSMUSG00000034714.10_114602591_114611310_1	chr11	+	1430	2	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	36334	493	36334	-493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGGGACTTCATTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	114602590	114611310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_114602665_114609954
ENSMUSG00000034723.12_134436664_134481705_1	chr2	-	4573	7	ISM	ENSMUSG00000034723.12	ENSMUST00000038228.11	5488	8	4360	559	4256	-559	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATGAGAAATCAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	134481705	134436663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_134440786_134441929_134441994_134442807_134442910_134451450_134451497_134462474_134462604_134463307_134463354_134481641
ENSMUSG00000034729.17_47679823_47689606_1	chr17	+	1004	7	NNC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	47679822	47689606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_47679880_47683351_47683417_47683497_47683571_47685897_47686035_47686865_47686968_47688684_47688775_47689126
ENSMUSG00000034729.17_47679823_47689606_2	chr17	+	1005	7	NNC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	925	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	47679822	47689606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_47679880_47683351_47683417_47683497_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689132
ENSMUSG00000034729.17_47683396_47689606_2	chr17	+	907	6	ISM	ENSMUSG00000034729.17	ENSMUST00000060752.13	1109	7	3274	-3	3274	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	47683395	47689606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ENSMUSG00000034732.5_118836696_118839085_1	chrX	+	1243	2	FSM	ENSMUSG00000034732.5	ENST00000373105.1	1243	2	5	-5	5	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCATCTTTATTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	118836695	118839085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_118836998_118838144
ENSMUSG00000034738.9_68966144_69005664_1	chr2	+	770	9	ISM	ENSMUSG00000034738.9	ENST00000444448.6	1997	16	143	13820	0	-10230	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAAGCTTGTGAGTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	68966143	69005664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_68966261_68975113_68975200_68982678_68982763_68986456_68986520_68986716_68986799_68989112_68989176_68991413_68991513_68996225_68996352_69005614
ENSMUSG00000034738.9_68966144_69005708_1	chr2	+	814	9	ISM	ENSMUSG00000034738.9	ENST00000444448.6	1997	16	143	13776	0	-10186	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTAAGTCATATCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	68966143	69005708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_68966261_68975113_68975200_68982678_68982763_68986456_68986520_68986716_68986799_68989112_68989176_68991413_68991513_68996225_68996352_69005614
ENSMUSG00000034738.9_68966144_69005760_1	chr2	+	866	9	ISM	ENSMUSG00000034738.9	ENST00000444448.6	1997	16	143	13724	0	-10134	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAGGCAAATCTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	68966143	69005760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_68966261_68975113_68975200_68982678_68982763_68986456_68986520_68986716_68986799_68989112_68989176_68991413_68991513_68996225_68996352_69005614
ENSMUSG00000034738.9_68966144_69005770_1	chr2	+	870	9	NNC	ENSMUSG00000034738.9	novel	1997	16	NA	NA	0	-10124	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGGACAGTTTGCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	68966143	69005770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_68966261_68975113_68975200_68982678_68982763_68986456_68986520_68986716_68986799_68989112_68989176_68991419_68991513_68996225_68996352_69005614
ENSMUSG00000034738.9_68975113_69005949_1	chr2	+	939	8	ISM	ENSMUSG00000034738.9	ENST00000444448.6	1997	16	9112	13535	0	-9945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGTGGAGACCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	68975112	69005949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_68975200_68982678_68982763_68986456_68986520_68986716_68986799_68989112_68989176_68991413_68991513_68996225_68996352_69005614
ENSMUSG00000034738.9_68982744_69006090_1	chr2	+	831	8	ISM	ENSMUSG00000034738.9	ENST00000444448.6	1997	16	16743	13394	7631	-9804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATATCCAGGCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	68982743	69006090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_68982763_68986456_68986520_68986716_68986799_68989112_68989176_68991413_68991513_68996225_68996352_69005614_69005950_69006046
ENSMUSG00000034738.9_68986457_69006173_1	chr2	+	889	7	NNC	ENSMUSG00000034738.9	novel	1997	16	NA	NA	11344	-9721	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTATGGAGGGGCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	68986456	69006173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_68986520_68986716_68986799_68989112_68989176_68991419_68991513_68996225_68996352_69005614_69005950_69006046
ENSMUSG00000034738.9_68986717_69009784_2	chr2	+	887	7	ISM	ENSMUSG00000034738.9	ENST00000444448.6	1997	16	20716	9700	11604	-6110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATTGGGGAGACTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	68986716	69009784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_68986799_68989112_68989176_68991413_68991513_68996225_68996352_69005614_69005950_69006046_69006173_69009728
ENSMUSG00000034738.9_68991412_69011263_1	chr2	+	886	6	ISM	ENSMUSG00000034738.9	ENST00000444448.6	1997	16	25411	8221	16299	-4631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAATTTGCAGAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	68991411	69011263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_68991513_68996225_68996352_69005614_69005950_69006046_69006173_69009728_69009838_69011174
ENSMUSG00000034738.9_68991469_69013186_1	chr2	+	845	7	ISM	ENSMUSG00000034738.9	ENST00000444448.6	1997	16	25468	6298	16356	-2708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTGCAAGCGAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	68991468	69013186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_68991513_68996225_68996352_69005614_69005950_69006046_69006173_69009728_69009838_69011174_69011264_69013170
ENSMUSG00000034738.9_68996224_69013297_1	chr2	+	914	6	ISM	ENSMUSG00000034738.9	ENST00000444448.6	1997	16	30223	6187	21111	-2597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGTGACGGTGAGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	68996223	69013297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_68996352_69005614_69005950_69006046_69006173_69009728_69009838_69011174_69011264_69013170
ENSMUSG00000034738.9_68996334_69014262_1	chr2	+	841	7	ISM	ENSMUSG00000034738.9	ENST00000444448.6	1997	16	30333	5222	21221	-1632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGACGAAGAGATTAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	68996333	69014262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_68996352_69005614_69005950_69006046_69006173_69009728_69009838_69011174_69011264_69013170_69013297_69014224
ENSMUSG00000034738.9_69005613_69014339_1	chr2	+	902	6	ISM	ENSMUSG00000034738.9	ENST00000397209.6	1276	13	30500	1555	30500	-1555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACCCAGTGCCCAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	69005612	69014339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_69005950_69006046_69006173_69009728_69009838_69011174_69011264_69013170_69013297_69014224
ENSMUSG00000034738.9_69005824_69019385_1	chr2	+	826	8	ISM	ENSMUSG00000034738.9	ENST00000444448.6	1997	16	39823	99	30711	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGGCTCTTTAAAAGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	69005823	69019385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_69005950_69006046_69006173_69009728_69009838_69011174_69011264_69013170_69013297_69014224_69014340_69015802_69015893_69019340
ENSMUSG00000034738.9_69005872_69019440_1	chr2	+	833	8	ISM	ENSMUSG00000034738.9	ENST00000444448.6	1997	16	39871	44	30759	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCCAAAGGCTGGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	69005871	69019440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_69005950_69006046_69006173_69009728_69009838_69011174_69011264_69013170_69013297_69014224_69014340_69015802_69015893_69019340
ENSMUSG00000034738.9_69005928_69019485_1	chr2	+	822	8	ISM	ENSMUSG00000034738.9	ENST00000444448.6	1997	16	39927	-1	30815	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATGGACACACAGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	69005927	69019485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_69005950_69006046_69006173_69009728_69009838_69011174_69011264_69013170_69013297_69014224_69014340_69015802_69015893_69019340
ENSMUSG00000034739.18_44013085_44014782_1	chr9	+	923	7	ISM	ENSMUSG00000034739.18	ENST00000360167.4	1577	10	34	3019	18	-3019	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTTCTCCTCTGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	44013084	44014782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44013244_44013330_44013434_44013547_44013662_44013762_44013937_44014078_44014293_44014513_44014645_44014754
ENSMUSG00000034739.18_44013085_44014821_1	chr9	+	962	7	ISM	ENSMUSG00000034739.18	ENST00000360167.4	1577	10	34	2980	18	-2980	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTATTACCGAGTGTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	44013084	44014821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44013244_44013330_44013434_44013547_44013662_44013762_44013937_44014078_44014293_44014513_44014645_44014754
ENSMUSG00000034739.18_44013085_44014847_1	chr9	+	988	7	ISM	ENSMUSG00000034739.18	ENST00000360167.4	1577	10	34	2954	18	-2954	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACGAGGCCAACTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	44013084	44014847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44013244_44013330_44013434_44013547_44013662_44013762_44013937_44014078_44014293_44014513_44014645_44014754
ENSMUSG00000034739.18_44013196_44016466_1	chr9	+	928	8	ISM	ENSMUSG00000034739.18	ENST00000360167.4	1577	10	145	1335	129	-1335	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTCAACGTTGTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	44013195	44016466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44013244_44013330_44013434_44013547_44013662_44013762_44013937_44014078_44014293_44014513_44014645_44014754_44014881_44016448
ENSMUSG00000034739.18_44013329_44016579_1	chr9	+	995	7	ISM	ENSMUSG00000034739.18	ENST00000360167.4	1577	10	278	1222	262	-1222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGTCCCTGGGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	44013328	44016579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44013434_44013547_44013662_44013762_44013937_44014078_44014293_44014513_44014645_44014754_44014881_44016448
ENSMUSG00000034739.18_44013402_44016720_1	chr9	+	959	8	ISM	ENSMUSG00000034739.18	ENST00000360167.4	1577	10	351	1081	335	-1081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGGGATCTGCAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	44013401	44016720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44013434_44013547_44013662_44013762_44013937_44014078_44014293_44014513_44014645_44014754_44014881_44016448_44016580_44016683
ENSMUSG00000034739.18_44013547_44016812_1	chr9	+	1020	7	ISM	ENSMUSG00000034739.18	ENST00000360167.4	1577	10	496	989	480	-989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGATCCTTCCTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	44013546	44016812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44013662_44013762_44013937_44014078_44014293_44014513_44014645_44014754_44014881_44016448_44016580_44016683
ENSMUSG00000034739.18_44013763_44016579_1	chr9	+	1002	7	ISM	ENSMUSG00000034739.18	ENSMUST00000161381.8	4254	14	696	3902	696	-1222	internal_fragment	TRUE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGTCCCTGGGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	44013762	44016579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44013937_44014078_44014293_44014513_44014645_44014754_44014881_44014990_44015068_44015877_44016027_44016448
ENSMUSG00000034739.18_44013807_44017615_1	chr9	+	937	7	ISM	ENSMUSG00000034739.18	ENST00000360167.4	1577	10	756	186	740	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCACTATCCTACCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	44013806	44017615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44013937_44014078_44014293_44014513_44014645_44014754_44014881_44016448_44016580_44016683_44016813_44017539
ENSMUSG00000034739.18_44014079_44017816_1	chr9	+	1008	6	ISM	ENSMUSG00000034739.18	ENST00000360167.4	1577	10	1028	-15	1012	15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGGGTGGGTGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	44014078	44017816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44014293_44014513_44014645_44014754_44014881_44016448_44016580_44016683_44016813_44017539
ENSMUSG00000034739.18_44015956_44018097_1	chr9	+	947	6	ISM	ENSMUSG00000034739.18	ENST00000619721.6	3995	16	2933	2384	2889	296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGCAGACTTCCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	44015955	44018097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44016027_44016448_44016580_44016683_44016813_44017328_44017457_44017539_44017820_44017889
ENSMUSG00000034739.18_44017607_44018668_1	chr9	+	992	2	ISM	ENSMUSG00000034739.18	ENST00000619721.6	3995	16	4584	1813	4540	867	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGGGTAGGAGTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	44017606	44018668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44017820_44017889
ENSMUSG00000034739.18_44017924_44019204_1	chr9	+	1030	2	ISM	ENSMUSG00000079592.10	ENSMUST00000114818.9	1337	3	-647	1277	-618	-1277	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGTGATGGCCGCGACGG	NA	NA	NA	NA	NA	NA	NA	NA	44017923	44019204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44018759_44019009
ENSMUSG00000034739.18_44017990_44019204_1	chr9	+	964	2	ISM	ENSMUSG00000079592.10	ENSMUST00000114818.9	1337	3	-581	1277	-552	-1277	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGTGATGGCCGCGACGG	NA	NA	NA	NA	NA	NA	NA	NA	44017989	44019204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44018759_44019009
ENSMUSG00000034739.18_44018672_44020176_1	chr9	+	931	3	FSM	ENSMUSG00000079592.10	ENSMUST00000114818.9	1337	3	101	305	61	-305	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGGAGGGCTGGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	44018671	44020176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_44018759_44019009_44019269_44019591
ENSMUSG00000034739.18_44019043_44020311_1	chr9	+	946	2	ISM	ENSMUSG00000079592.10	ENSMUST00000114815.3	1215	3	432	170	432	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAGGACTTTAGAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	44019042	44020311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44019269_44019591
ENSMUSG00000034739.18_44019128_44020340_1	chr9	+	890	2	ISM	ENSMUSG00000079592.10	ENSMUST00000114815.3	1215	3	517	141	517	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTGGGTCCTGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	44019127	44020340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_44019269_44019591
ENSMUSG00000034744.14_83772143_83779538_1	chr6	+	1187	10	NNC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	83772142	83779538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_83772231_83773893_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUSG00000034744.14_83772143_83779538_2	chr6	+	1226	10	FSM	ENSMUSG00000034744.14	ENSMUST00000037376.14	1405	10	179	0	-74	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	83772142	83779538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUSG00000034744.14_83772217_83779538_1	chr6	+	1152	10	FSM	ENSMUSG00000034744.14	ENSMUST00000037376.14	1405	10	253	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	83772216	83779538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUSG00000034744.14_83772217_83779538_2	chr6	+	1118	10	FSM	ENSMUSG00000034744.14	ENSMUST00000113851.8	1323	10	207	-2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	83772216	83779538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_83772231_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUSG00000034744.14_83774158_83778559_1	chr6	+	719	7	ISM	ENSMUSG00000034744.14	ENST00000443938.6	1081	9	270	968	270	-968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCTGGGTGGGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	83774157	83778559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778492
ENSMUSG00000034744.14_83774932_83779316_1	chr6	+	691	7	ISM	ENSMUSG00000034744.14	ENST00000443938.6	1081	9	1044	211	1044	-211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAGTTGCGGCATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	83774931	83779316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778492_83778559_83779249
ENSMUSG00000034748.17_81457621_81463400_1	chr10	-	1660	8	FSM	ENSMUSG00000034748.17	ENSMUST00000042923.9	1891	8	231	0	231	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTTACATTTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	81463400	81457620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463305
ENSMUSG00000034757.16_102175777_102179541_1	chr11	+	1397	4	FSM	ENSMUSG00000034757.16	ENSMUST00000036376.13	1939	4	20	522	20	-465	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCCTCCTGGCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	102175776	102179541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_102175915_102176489_102176545_102178133_102178698_102178901
ENSMUSG00000034757.16_102175777_102179587_1	chr11	+	1443	4	FSM	ENSMUSG00000034757.16	ENSMUST00000036376.13	1939	4	20	476	20	-419	multi-exon	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCAGGGTTGCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	102175776	102179587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_102175915_102176489_102176545_102178133_102178698_102178901
ENSMUSG00000034757.16_102176407_102180063_1	chr11	+	1946	3	FSM	ENSMUSG00000034757.16	ENST00000319511.6	2282	3	393	-57	-93	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTCTTTGTGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	102176406	102180063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_102176545_102178051_102178698_102178901
ENSMUSG00000034757.16_102178060_102180063_1	chr11	+	1513	2	NNC	ENSMUSG00000034757.16	novel	1454	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTCTTTGTGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	102178059	102180063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_102178411_102178901
ENSMUSG00000034757.16_102178132_102180063_1	chr11	+	1439	2	FSM	ENSMUSG00000034757.16	ENST00000590235.5	1383	2	1	-57	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTCTTTGTGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	102178131	102180063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_102178409_102178901
ENSMUSG00000034761.16_69850535_69896395_1	chr12	-	3575	24	NNC	ENSMUSG00000034761.16	novel	4334	30	NA	NA	43235	-1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTATAAAGTATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	69896395	69850534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865276_69869576_69869638_69870195_69870271_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320
ENSMUSG00000034761.16_69850535_69897775_1	chr12	-	3669	26	ISM	ENSMUSG00000034761.16	ENSMUST00000171211.8	4334	30	42102	2	41855	-1	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTATAAAGTATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	69897775	69850534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865276_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727
ENSMUSG00000034761.16_69850743_69903574_1	chr12	-	3610	29	ISM	ENSMUSG00000034761.16	ENSMUST00000171211.8	4334	30	36303	210	36056	-209	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTGAGGAAAACAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	69903574	69850742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865276_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546
ENSMUSG00000034761.16_69850979_69939511_1	chr12	-	3580	31	FSM	ENSMUSG00000034761.16	ENSMUST00000049239.8	4452	31	426	446	119	-445	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGGGATAGTATAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	69939511	69850978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865276_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ENSMUSG00000034761.16_69850983_69939514_1	chr12	-	3579	31	FSM	ENSMUSG00000034761.16	ENSMUST00000049239.8	4452	31	423	450	116	-449	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGATGGGATAGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	69939514	69850982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865276_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ENSMUSG00000034761.16_69851031_69939580_1	chr12	-	3597	31	FSM	ENSMUSG00000034761.16	ENSMUST00000049239.8	4452	31	357	498	50	-497	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTGAGTAGGCTTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	69939580	69851030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865276_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ENSMUSG00000034761.16_69851049_69939575_1	chr12	-	3574	31	FSM	ENSMUSG00000034761.16	ENSMUST00000049239.8	4452	31	362	516	55	-515	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACATACATAGATATTCA	NA	NA	NA	NA	NA	NA	NA	NA	69939575	69851048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865276_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ENSMUSG00000034761.16_69851053_69939570_1	chr12	-	3560	31	NNC	ENSMUSG00000034761.16	novel	4452	31	NA	NA	60	-519	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTTCACATACATAGATA	NA	NA	NA	NA	NA	NA	NA	NA	69939570	69851052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865276_69869576_69869638_69870195_69870271_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ENSMUSG00000034761.16_69851106_69939626_1	chr12	-	3568	31	FSM	ENSMUSG00000034761.16	ENSMUST00000049239.8	4452	31	311	573	4	-572	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTACTTATGTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	69939626	69851105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865276_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ENSMUSG00000034761.16_69851202_69939783_1	chr12	-	3629	31	FSM	ENSMUSG00000034761.16	ENSMUST00000049239.8	4452	31	154	669	0	-668	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTTACATTAGGGATA	NA	NA	NA	NA	NA	NA	NA	NA	69939783	69851201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865276_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ENSMUSG00000034761.16_69851209_69939783_1	chr12	-	3622	31	FSM	ENSMUSG00000034761.16	ENSMUST00000049239.8	4452	31	154	676	0	-675	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTTGTTTTTTACATT	NA	NA	NA	NA	NA	NA	NA	NA	69939783	69851208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865276_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ENSMUSG00000034765.7_53518001_53530027_1	chr19	+	1177	4	FSM	ENSMUSG00000034765.7	ENSMUST00000038287.7	2473	4	461	835	461	-835	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTAGTCCTTGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	53518000	53530027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_53518128_53522256_53522406_53525887_53526108_53529346
ENSMUSG00000034765.7_53525925_53530313_1	chr19	+	1150	2	ISM	ENSMUSG00000034765.7	ENSMUST00000038287.7	2473	4	8385	549	8385	-549	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGTCCAGGGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	53525924	53530313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_53526108_53529346
ENSMUSG00000034771.16_81411688_81423407_1	chr10	+	1244	13	ISM	ENSMUSG00000034771.16	ENST00000443826.7	2010	17	50	2764	50	-2764	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1012	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCAAGCTGCTGCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	81411687	81423407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81411737_81412069_81412134_81412431_81412477_81413462_81413526_81416090_81416166_81417478_81417590_81418246_81418292_81418570_81418721_81420436_81420576_81422046_81422208_81422691_81422763_81422925_81423176_81423386
ENSMUSG00000034771.16_81413460_81423634_1	chr10	+	1316	10	ISM	ENSMUSG00000034771.16	ENST00000443826.7	2010	17	1822	2537	1822	-2537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGGGGCGGCCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	81413459	81423634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81413526_81416090_81416166_81417478_81417590_81418246_81418292_81418570_81418721_81420436_81420576_81422046_81422208_81422691_81422763_81422925_81423176_81423386
ENSMUSG00000034771.16_81416141_81423780_1	chr10	+	1273	10	ISM	ENSMUSG00000034771.16	ENST00000443826.7	2010	17	4503	2391	4503	-2391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGGACAACACTGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	81416140	81423780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81416166_81417478_81417590_81418246_81418292_81418570_81418721_81420436_81420576_81422046_81422208_81422691_81422763_81422925_81423176_81423386_81423635_81423707
ENSMUSG00000034771.16_81417478_81423855_1	chr10	+	1327	9	ISM	ENSMUSG00000034771.16	ENSMUST00000146358.8	2749	21	6112	2824	5840	-2316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGCTCACAATCCTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	81417477	81423855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81417590_81418246_81418292_81418570_81418721_81420436_81420576_81422046_81422208_81422688_81422763_81422925_81423176_81423386_81423635_81423707
ENSMUSG00000034771.16_81417478_81425330_1	chr10	+	1555	11	ISM	ENSMUSG00000034771.16	ENSMUST00000146358.8	2749	21	6112	1349	5840	-841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	924	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTGGTCTCCCCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	81417477	81425330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81417590_81418246_81418292_81418570_81418721_81420436_81420576_81422046_81422208_81422688_81422763_81422925_81423176_81423386_81423635_81423707_81423856_81424642_81424794_81425253
ENSMUSG00000034771.16_81420436_81426302_1	chr10	+	1493	9	ISM	ENSMUSG00000034771.16	ENSMUST00000146358.8	2749	21	9070	377	8798	-5	internal_fragment	FALSE	canonical	NA	NA	NA	NA	998	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTCTTTCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	81420435	81426302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81420576_81422046_81422208_81422688_81422763_81422925_81423176_81423386_81423635_81423707_81423856_81424642_81424794_81425253_81425331_81426058
ENSMUSG00000034771.16_81422046_81426171_1	chr10	+	1223	8	ISM	ENSMUSG00000034771.16	ENSMUST00000146358.8	2749	21	10680	508	10408	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCCTTTTCAGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	81422045	81426171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81422208_81422688_81422763_81422925_81423176_81423386_81423635_81423707_81423856_81424642_81424794_81425253_81425331_81426058
ENSMUSG00000034771.16_81422128_81424744_1	chr10	+	902	6	ISM	ENSMUSG00000034771.16	ENSMUST00000146358.8	2749	21	10762	1935	10490	-1427	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGCCTCCATGAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	81422127	81424744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81422208_81422688_81422763_81422925_81423176_81423386_81423635_81423707_81423856_81424642
ENSMUSG00000034773.17_102139708_102150286_1	chr11	+	1555	5	ISM	ENSMUSG00000034773.17	ENSMUST00000100392.5	2547	10	0	5727	0	-5708	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGTCCTGAGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	102139707	102150286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145
ENSMUSG00000034773.17_102139838_102150725_1	chr11	+	1491	6	ISM	ENSMUSG00000034773.17	ENSMUST00000100392.5	2547	10	130	5288	130	-5269	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGCACAATGGATGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	102139837	102150725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150287_102150659
ENSMUSG00000034773.17_102145808_102151440_1	chr11	+	1359	4	ISM	ENSMUSG00000034773.17	ENST00000245382.6	1925	5	30	4554	30	-4554	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAAGTGGGGCGGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	102145807	102151440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102146848_102150659_102150769_102150904_102150991_102151316
ENSMUSG00000034773.17_102145878_102150286_2	chr11	+	1195	3	ISM	ENSMUSG00000034773.17	ENST00000319977.8	1529	7	100	5708	100	-5708	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGTCCTGAGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	102145877	102150286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102146848_102148712_102148797_102150145
ENSMUSG00000034773.17_102145878_102151442_1	chr11	+	1516	6	ISM	ENSMUSG00000034773.17	ENSMUST00000100392.5	2547	10	6170	4571	100	-4552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGGGCGGGAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	102145877	102151442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316
ENSMUSG00000034773.17_102146146_102156013_1	chr11	+	1175	6	NNC	ENSMUSG00000034773.17	novel	2547	10	NA	NA	368	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTCCCACACCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	102146145	102156013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102155960
ENSMUSG00000034773.17_102146347_102156013_1	chr11	+	1375	5	FSM	ENSMUSG00000034773.17	ENST00000245382.6	1925	5	569	-19	569	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTCCCACACCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	102146346	102156013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_102146848_102150659_102150769_102150904_102150991_102151316_102151443_102155460
ENSMUSG00000034773.17_102146482_102155840_1	chr11	+	1410	8	ISM	ENSMUSG00000034773.17	ENSMUST00000100392.5	2547	10	6774	173	704	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGACTTGATTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	102146481	102155840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ENSMUSG00000034780.7_67950188_67951570_1	chr2	+	813	2	ISM	ENSMUSG00000034780.7	ENST00000392690.3	4149	3	1984	1460	1984	712	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATCAACCAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	67950187	67951570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_67950829_67951398
ENSMUSG00000034780.7_67950666_67952168_1	chr2	+	825	3	FSM	ENSMUSG00000034780.7	ENST00000392690.3	4149	3	2462	862	2462	-862	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCCATTATTTCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	67950665	67952168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_67950829_67951398_67951982_67952089
ENSMUSG00000034780.7_67950723_67952216_1	chr2	+	816	3	FSM	ENSMUSG00000034780.7	ENST00000392690.3	4149	3	2519	814	2519	-814	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAAGTTTCTTCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	67950722	67952216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_67950829_67951398_67951982_67952089
ENSMUSG00000034780.7_67950796_67952267_1	chr2	+	794	3	FSM	ENSMUSG00000034780.7	ENST00000392690.3	4149	3	2592	763	2592	-763	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCATTTATGTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	67950795	67952267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_67950829_67951398_67951982_67952089
ENSMUSG00000034780.7_67951494_67952410_1	chr2	+	809	2	ISM	ENSMUSG00000034780.7	ENST00000392690.3	4149	3	3290	620	3290	-620	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGAGGGGAAACAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	67951493	67952410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_67951982_67952089
ENSMUSG00000034780.7_67951891_67952824_1	chr2	+	826	2	ISM	ENSMUSG00000034780.7	ENST00000392690.3	4149	3	3687	206	3687	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTGTATCGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	67951890	67952824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_67951982_67952089
ENSMUSG00000034781.6_81365237_81367004_1	chr10	-	1662	2	ISM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	14020	679	14020	-679	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAAGTTGGGACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	81367004	81365236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81366820_81366925
ENSMUSG00000034781.6_81365303_81367044_1	chr10	-	1636	2	ISM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	13980	745	13980	-745	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATGGCAGGGTCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	81367044	81365302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81366820_81366925
ENSMUSG00000034781.6_81365528_81368358_1	chr10	-	1705	4	ISM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	12666	970	12666	-970	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAGACACACGCCAATC	NA	NA	NA	NA	NA	NA	NA	NA	81368358	81365527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229
ENSMUSG00000034781.6_81365665_81369156_1	chr10	-	1639	5	ISM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	11868	1107	11868	-1107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTCATATACACTACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	81369156	81365664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085
ENSMUSG00000034781.6_81365723_81369200_1	chr10	-	1625	5	ISM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	11824	1165	11824	-1165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACCAGCGTATAGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	81369200	81365722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085
ENSMUSG00000034781.6_81365830_81371006_1	chr10	-	1651	6	ISM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	10018	1272	10018	-1272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCAAATATTCTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	81371006	81365829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913
ENSMUSG00000034781.6_81365832_81370977_1	chr10	-	1620	6	ISM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	10047	1274	10047	-1274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTCCAAATATTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	81370977	81365831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913
ENSMUSG00000034781.6_81365892_81371071_1	chr10	-	1654	6	ISM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	9953	1334	9953	-1334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTGGTTCAGCAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	81371071	81365891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913
ENSMUSG00000034781.6_81365903_81371053_1	chr10	-	1625	6	ISM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	9971	1345	9971	-1345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCCAAGTCTATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	81371053	81365902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913
ENSMUSG00000034781.6_81365958_81371098_1	chr10	-	1615	6	ISM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	9926	1400	9926	-1400	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGAAAGGCCCTGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	81371098	81365957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913
ENSMUSG00000034781.6_81366121_81381024_1	chr10	-	1851	7	FSM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	0	1563	0	-1563	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGAGAAATATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	81381024	81366120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
ENSMUSG00000034781.6_81366254_81381024_1	chr10	-	1718	7	FSM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	0	1696	0	-1696	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAGTTATTGATATCCC	NA	NA	NA	NA	NA	NA	NA	NA	81381024	81366253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
ENSMUSG00000034785.16_107149561_107154829_1	chr4	-	295	3	ISM	ENSMUSG00000034785.16	ENST00000524406.5	541	4	9287	0	9287	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCACTCCACCTAGACACG	NA	NA	NA	NA	NA	NA	NA	NA	107154829	107149560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107149620_107150945_107151146_107154793
ENSMUSG00000034785.16_107151022_107164000_1	chr4	-	290	3	ISM	ENSMUSG00000034785.16	ENSMUST00000082426.11	1690	4	366	2360	116	-1461	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCAGAGCAGCCAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	107164000	107151021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107151146_107154793_107154938_107163978
ENSMUSG00000034785.16_107151085_107164039_1	chr4	-	266	3	ISM	ENSMUSG00000034785.16	ENSMUST00000082426.11	1690	4	327	2423	77	-1524	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGCAGCCCGCATGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	107164039	107151084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107151146_107154793_107154938_107163978
ENSMUSG00000034785.16_107151125_107164100_1	chr4	-	287	3	ISM	ENSMUSG00000034785.16	ENSMUST00000082426.11	1690	4	266	2463	16	-1564	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGGACATCCGGCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	107164100	107151124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_107151146_107154793_107154938_107163978
ENSMUSG00000034789.9_55467693_55469271_1	chr13	-	765	7	ISM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	487	-5	487	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCACTGGGTGTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	55469271	55467692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202
ENSMUSG00000034789.9_55467856_55469429_1	chr13	-	681	8	FSM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	329	158	329	-158	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCAGAGGTGGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	55469429	55467855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ENSMUSG00000034789.9_55467881_55469456_1	chr13	-	683	8	FSM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	302	183	302	-183	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTCTGAGCTATTCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	55469456	55467880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ENSMUSG00000034789.9_55467912_55469483_1	chr13	-	679	8	FSM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	275	214	275	-214	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGACTCTTGTCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	55469483	55467911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ENSMUSG00000034789.9_55467933_55469592_1	chr13	-	767	8	FSM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	166	235	166	-235	multi-exon	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATTCCCAGAGGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	55469592	55467932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ENSMUSG00000034789.9_55467961_55469592_1	chr13	-	739	8	FSM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	166	263	166	-263	multi-exon	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACTCATCTGGCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	55469592	55467960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ENSMUSG00000034789.9_55467965_55469592_1	chr13	-	735	8	FSM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	166	267	166	-267	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCACCACTCATCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	55469592	55467964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ENSMUSG00000034789.9_55467992_55469592_1	chr13	-	708	8	FSM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	166	294	166	-294	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTTCTACAGCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55469592	55467991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ENSMUSG00000034789.9_55468313_55469744_1	chr13	-	764	6	ISM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	14	615	14	-615	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTTGTCTTGGGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	55469744	55468312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ENSMUSG00000034793.16_102080581_102084052_1	chr11	+	848	5	ISM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	86	855	86	-855	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCTACTTTAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	102080580	102084052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910
ENSMUSG00000034793.16_102080839_102084424_1	chr11	+	746	6	FSM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	344	483	344	-483	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAATGGCCAGAAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	102080838	102084424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
ENSMUSG00000034793.16_102080839_102084577_1	chr11	+	899	6	FSM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	344	330	344	-330	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTGGTGCACACATTGA	NA	NA	NA	NA	NA	NA	NA	NA	102080838	102084577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
ENSMUSG00000034793.16_102082851_102084718_1	chr11	+	919	5	ISM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	2356	189	2356	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCCGCTCACCTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	102082850	102084718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
ENSMUSG00000034793.16_102083572_102084907_1	chr11	+	903	3	ISM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	3077	0	3077	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTCTTGTCTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	102083571	102084907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_102083694_102083910_102084053_102084268
ENSMUSG00000034800.16_127418190_127419314_1	chr2	-	1041	2	NNC	ENSMUSG00000034800.16	novel	1706	3	NA	NA	1321	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTATAGTCTAGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	127419314	127418189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_127418554_127418637
ENSMUSG00000034800.16_127418190_127419341_1	chr2	-	1079	2	NNC	ENSMUSG00000034800.16	novel	1706	3	NA	NA	1294	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTATAGTCTAGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	127419341	127418189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_127418561_127418633
ENSMUSG00000034800.16_127418198_127419323_1	chr2	-	1045	2	ISM	ENSMUSG00000034800.16	ENST00000617923.4	1706	3	1312	8	1312	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTAAGTACTATAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	127419323	127418197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127418563_127418643
ENSMUSG00000034800.16_127418245_127419379_1	chr2	-	1054	2	ISM	ENSMUSG00000034800.16	ENST00000617923.4	1706	3	1256	55	1256	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTTTACTGTCTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	127419379	127418244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127418563_127418643
ENSMUSG00000034800.16_127418361_127419510_1	chr2	-	1066	2	NNC	ENSMUSG00000034800.16	novel	1706	3	NA	NA	1125	116	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTAGACTAGTAGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	127419510	127418360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_127418554_127418637
ENSMUSG00000034800.16_127418418_127419557_1	chr2	-	1056	2	NNC	ENSMUSG00000034800.16	novel	1706	3	NA	NA	1078	59	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTGGAGCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	127419557	127418417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_127418554_127418637
ENSMUSG00000034800.16_127418445_127419598_1	chr2	-	1073	2	ISM	ENSMUSG00000034800.16	ENST00000617923.4	1706	3	1037	255	1037	32	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACCATTTTCTCTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	127419598	127418444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127418563_127418643
ENSMUSG00000034800.16_127418855_127420638_1	chr2	-	1125	2	ISM	ENSMUSG00000034800.16	ENST00000617923.4	1706	3	-3	665	-3	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCGGGCCTTCCTGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	127420638	127418854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127419865_127420523
ENSMUSG00000034800.16_127418855_127423442_1	chr2	-	1332	4	NNC	ENSMUSG00000034800.16	novel	1284	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3042	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCGGGCCTTCCTGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	127423442	127418854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_127419899_127420523_127420638_127422816_127422944_127423395
ENSMUSG00000034800.16_127418855_127423442_2	chr2	-	1337	4	FSM	ENSMUSG00000034800.16	ENST00000611147.1	1324	4	4	-17	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCGGGCCTTCCTGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	127423442	127418854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_127419904_127420523_127420638_127422816_127422944_127423395
ENSMUSG00000034800.16_127419212_127422867_1	chr2	-	704	2	ISM	ENSMUSG00000034800.16	ENST00000622059.4	1485	4	579	735	561	-340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCAGGGACTGTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	127422867	127419211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127419865_127422816
ENSMUSG00000034800.16_127419273_127422910_1	chr2	-	686	2	ISM	ENSMUSG00000034800.16	ENST00000622059.4	1485	4	536	796	518	-401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGCCAGAAAAGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	127422910	127419272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_127419865_127422816
ENSMUSG00000034807.10_72063642_72070923_1	chr8	+	1016	5	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	0	6632	0	-6632	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGAGGCCGGGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	72063641	72070923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718
ENSMUSG00000034807.10_72063815_72073267_1	chr8	+	986	7	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	173	4288	173	-4288	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGATTCATCTCAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	72063814	72073267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244
ENSMUSG00000034807.10_72063815_72073321_1	chr8	+	1040	7	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	173	4234	173	-4234	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGCTGGGGCCTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	72063814	72073321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244
ENSMUSG00000034807.10_72064020_72074440_1	chr8	+	975	9	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	378	3115	378	-3115	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGATGCTGCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	72064019	72074440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407
ENSMUSG00000034807.10_72065551_72075474_1	chr8	+	1026	8	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	1909	2081	1909	-2081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGGAGATTGATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	72065550	72075474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346
ENSMUSG00000034807.10_72070231_72075825_1	chr8	+	960	8	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	6589	1730	6589	-1730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTAGCCTATGTAATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	72070230	72075825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733
ENSMUSG00000034807.10_72070716_72076167_1	chr8	+	1011	8	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	7074	1388	7074	-1388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGCGTGCCTTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	72070715	72076167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ENSMUSG00000034807.10_72072293_72076284_1	chr8	+	923	7	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	8651	1271	8651	-1271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACTGGGACCGAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	72072292	72076284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ENSMUSG00000034807.10_72072334_72076346_1	chr8	+	944	7	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	8692	1209	8692	-1209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAACTCAGATGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	72072333	72076346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ENSMUSG00000034807.10_72072389_72076396_1	chr8	+	939	7	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	8747	1159	8747	-1159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTGAGGCAACTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	72072388	72076396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ENSMUSG00000034807.10_72074525_72076730_1	chr8	+	945	4	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	10883	825	10883	-825	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTCAGGTATTAGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	72074524	72076730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72074541_72075346_72075475_72075733_72075941_72076136
ENSMUSG00000034807.10_72075448_72076844_1	chr8	+	942	3	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	11806	711	11806	-711	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCAAGCAAAATATAC	NA	NA	NA	NA	NA	NA	NA	NA	72075447	72076844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72075475_72075733_72075941_72076136
ENSMUSG00000034807.10_72075793_72076950_1	chr8	+	962	2	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	12151	605	12151	-605	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCAGTGGTGCTTATCCT	NA	NA	NA	NA	NA	NA	NA	NA	72075792	72076950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72075941_72076136
ENSMUSG00000034807.10_72075857_72076987_1	chr8	+	935	2	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	12215	568	12215	-568	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTACGGTGGAAACAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	72075856	72076987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72075941_72076136
ENSMUSG00000034820.5_10502630_10510781_1	chr19	+	576	5	FSM	ENSMUSG00000034820.5	ENST00000541963.5	549	5	-27	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGCTCAGGCTCGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	10502629	10510781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10510226_10510288_10510656
ENSMUSG00000034820.5_10502630_10517153_1	chr19	+	1344	8	ISM	ENSMUSG00000034820.5	ENST00000439958.8	3475	10	0	7866	0	-1281	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGATTGACCTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	10502629	10517153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983
ENSMUSG00000034820.5_10503315_10523334_1	chr19	+	1729	9	FSM	ENSMUSG00000034820.5	ENST00000448745.5	1739	9	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCTTTGTCCAAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	10503314	10523334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_10503425_10509144_10509364_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ENSMUSG00000034820.5_10509183_10509527_1	chr19	+	214	2	ISM	ENSMUSG00000034820.5	ENST00000626926.1	306	3	5812	0	5812	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGTACTGGTGCCGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	10509182	10509527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10509364_10509494
ENSMUSG00000034820.5_10512718_10523692_1	chr19	+	1258	5	ISM	ENSMUSG00000034820.5	ENST00000448745.5	1739	9	9413	-358	9347	358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTGACTCCTCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	10512717	10523692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ENSMUSG00000034820.5_10514159_10523818_1	chr19	+	1223	4	ISM	ENSMUSG00000034820.5	ENST00000448745.5	1739	9	10854	-484	10788	484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCTTAGGTATTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	10514158	10523818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10514282_10516983_10517153_10518044_10518213_10523055
ENSMUSG00000034820.5_10514194_10523886_1	chr19	+	1256	4	ISM	ENSMUSG00000034820.5	ENST00000448745.5	1739	9	10889	-552	10823	552	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCTTGTTTTAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	10514193	10523886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10514282_10516983_10517153_10518044_10518213_10523055
ENSMUSG00000034820.5_10514253_10523933_1	chr19	+	1244	4	ISM	ENSMUSG00000034820.5	ENST00000448745.5	1739	9	10948	-599	10882	599	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGGACCTCAGTAACGA	NA	NA	NA	NA	NA	NA	NA	NA	10514252	10523933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10514282_10516983_10517153_10518044_10518213_10523055
ENSMUSG00000034820.5_10517077_10524043_1	chr19	+	1232	3	ISM	ENSMUSG00000034820.5	ENST00000448745.5	1739	9	13772	-709	13706	709	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTAAGCATAGGCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	10517076	10524043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10517153_10518044_10518213_10523055
ENSMUSG00000034820.5_10517125_10524100_1	chr19	+	1241	3	ISM	ENSMUSG00000034820.5	ENST00000448745.5	1739	9	13820	-766	13754	766	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAGCACTAATGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	10517124	10524100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10517153_10518044_10518213_10523055
ENSMUSG00000034820.5_10518138_10524219_1	chr19	+	1239	2	ISM	ENSMUSG00000034820.5	ENST00000448745.5	1739	9	14833	-885	14767	-798	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCCTTTAACAAGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	10518137	10524219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10518213_10523055
ENSMUSG00000034826.15_92563399_92576069_1	chr5	-	1783	9	ISM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	7009	0	7009	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGGTGTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	92576069	92563398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958
ENSMUSG00000034826.15_92563601_92578724_1	chr5	-	1762	10	ISM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	4354	202	4354	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGGTTTTCCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	92578724	92563600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659
ENSMUSG00000034826.15_92563746_92578947_1	chr5	-	1755	11	ISM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	4131	347	4131	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCACAGAGCTACTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	92578947	92563745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897
ENSMUSG00000034826.15_92563862_92582950_1	chr5	-	1761	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	128	463	128	-463	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTACTTTTAAAGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	92582950	92563861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
ENSMUSG00000034826.15_92563919_92583001_1	chr5	-	1755	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	77	520	77	-520	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCACCACAAAGCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	92583001	92563918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
ENSMUSG00000034833.11_130184068_130197802_1	chr10	+	770	6	FSM	ENSMUSG00000034833.11	ENST00000532804.5	985	6	37	178	-16	-178	multi-exon	FALSE	canonical	NA	NA	NA	NA	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACCCTACTCACCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	130184067	130197802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_130184127_130190487_130190637_130191319_130191374_130192634_130192772_130196515_130196725_130197640
ENSMUSG00000034833.11_130184104_130197841_1	chr10	+	674	6	FSM	ENSMUSG00000034833.11	ENST00000531122.5	833	6	20	139	20	-139	multi-exon	FALSE	canonical	NA	NA	NA	NA	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAAAATGTGCCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	130184103	130197841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_130184127_130190586_130190637_130191319_130191374_130192634_130192772_130196515_130196725_130197640
ENSMUSG00000034833.11_130184108_130197883_1	chr10	+	811	6	FSM	ENSMUSG00000034833.11	ENST00000532804.5	985	6	77	97	24	-97	multi-exon	FALSE	canonical	NA	NA	NA	NA	2674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCATCTTACAACAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	130184107	130197883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_130184127_130190487_130190637_130191319_130191374_130192634_130192772_130196515_130196725_130197640
ENSMUSG00000034845.7_71960245_71964070_1	chr8	-	880	3	ISM	ENSMUSG00000034845.7	ENST00000252590.9	1185	4	294	9541	294	-9541	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGCCTTCCCCGCCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	71964070	71960244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71960952_71961107_71961205_71963994
ENSMUSG00000034845.7_71960363_71964254_1	chr8	-	946	3	ISM	ENSMUSG00000034845.7	ENST00000252590.9	1185	4	110	9659	110	-9659	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	930	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCGCGCAGCGGGACAACC	NA	NA	NA	NA	NA	NA	NA	NA	71964254	71960362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71960952_71961107_71961205_71963994
ENSMUSG00000034848.18_66014873_66037877_1	chr2	-	1320	8	ISM	ENSMUSG00000034848.18	ENSMUST00000102718.10	4470	29	49084	202	49059	114	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCGTTTCTACAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	66037877	66014872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66015188_66016497_66016566_66018603_66018725_66021902_66022128_66028011_66028208_66031466_66031629_66031816_66031968_66037795
ENSMUSG00000034854.9_81193386_81200873_1	chr10	+	2724	10	FSM	ENSMUSG00000034854.9	ENSMUST00000044844.9	3971	10	61	1186	61	-1186	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTCTTTGCCAAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	81193385	81200873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
ENSMUSG00000034854.9_81193579_81201038_1	chr10	+	2696	10	FSM	ENSMUSG00000034854.9	ENSMUST00000044844.9	3971	10	254	1021	254	-1021	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGGGGGAAGGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	81193578	81201038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
ENSMUSG00000034854.9_81197173_81201624_1	chr10	+	2765	7	ISM	ENSMUSG00000034854.9	ENSMUST00000044844.9	3971	10	3848	435	3848	-435	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGCCTGCCCAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	81197172	81201624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
ENSMUSG00000034854.9_81198051_81201821_1	chr10	+	2696	5	ISM	ENSMUSG00000034854.9	ENSMUST00000044844.9	3971	10	4726	238	4726	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCACCCCATCTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	81198050	81201821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
ENSMUSG00000034867.17_35299768_35307883_1	chr7	+	991	10	ISM	ENSMUSG00000034867.17	ENSMUST00000186245.7	1926	12	14093	656	14066	-656	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCCTGCTAAAGCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	35299767	35307883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745
ENSMUSG00000034867.17_35313901_35338164_1	chr7	+	2412	16	ISM	ENSMUSG00000034867.17	ENSMUST00000040844.16	4284	29	28232	487	28199	-487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTGGGGAAAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	35313900	35338164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ENSMUSG00000034868.10_71281021_71282616_1	chr17	-	634	2	ISM	ENSMUSG00000034868.10	ENSMUST00000233004.2	1001	4	2911	0	2911	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTCTGGTTTTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	71282616	71281020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71281492_71282453
ENSMUSG00000034868.10_71281266_71297525_1	chr17	-	645	4	FSM	ENSMUSG00000034868.10	ENSMUST00000038446.10	2143	4	360	1138	360	-245	multi-exon	FALSE	canonical	NA	NA	NA	NA	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACACACACCCCATAGG	NA	NA	NA	NA	NA	NA	NA	NA	71297525	71281265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_71281492_71282453_71282616_71284042_71284242_71297467
ENSMUSG00000034868.10_71282457_71297639_1	chr17	-	525	3	NNC	ENSMUSG00000034868.10	novel	2143	4	NA	NA	246	-1436	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTAACGCGCTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	71297639	71282456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_71282616_71284042_71284242_71297472
ENSMUSG00000034868.10_71282487_71297709_1	chr17	-	570	3	ISM	ENSMUSG00000034868.10	ENSMUST00000038446.10	2143	4	176	2359	176	-1466	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTTCGCTTGCTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	71297709	71282486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71282616_71284042_71284242_71297467
ENSMUSG00000034868.10_71282492_71297719_1	chr17	-	570	3	NNC	ENSMUSG00000034868.10	novel	2143	4	NA	NA	166	-1471	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAACGCCTTCGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	71297719	71282491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_71282616_71284042_71284242_71297472
ENSMUSG00000034868.10_71282544_71297768_1	chr17	-	567	3	NNC	ENSMUSG00000034868.10	novel	2143	4	NA	NA	117	-1523	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCACCATGTTTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	71297768	71282543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_71282616_71284042_71284242_71297472
ENSMUSG00000034868.10_71284042_71297885_1	chr17	-	618	2	ISM	ENSMUSG00000034868.10	ENSMUST00000038446.10	2143	4	0	3914	0	-3021	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTTCTGTGCATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	71297885	71284041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_71284242_71297467
ENSMUSG00000034875.6_35246610_35254704_1	chr7	-	1273	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	1025	0	1025	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTTTATTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	35254704	35246609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_35247549_35250878_35251087_35254578
ENSMUSG00000034875.6_35250878_35255729_1	chr7	-	1360	2	ISM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	0	4268	0	-4268	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTCAGAGAAGTATAGCA	NA	NA	NA	NA	NA	NA	NA	NA	35255729	35250877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_35251087_35254578
ENSMUSG00000034889.9_81156937_81160714_1	chr10	+	1541	7	ISM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	0	1362	0	-1362	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCAAGATGTTCTTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	81156936	81160714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702
ENSMUSG00000034889.9_81157115_81160996_1	chr10	+	1544	8	ISM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	178	1080	178	-1080	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACAGCACCAGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	81157114	81160996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923
ENSMUSG00000034889.9_81157194_81161042_1	chr10	+	1511	8	ISM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	257	1034	257	-1034	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGATGGAGGAAGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	81157193	81161042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923
ENSMUSG00000034889.9_81157251_81161093_1	chr10	+	1505	8	ISM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	314	983	314	-983	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCTACAGCCCACGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	81157250	81161093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923
ENSMUSG00000034889.9_81158610_81161555_1	chr10	+	1512	8	ISM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	1673	521	1673	-521	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGACCTCATCCGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	81158609	81161555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
ENSMUSG00000034889.9_81158661_81161607_1	chr10	+	1513	8	ISM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	1724	469	1724	-469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGACAACCGGGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	81158660	81161607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
ENSMUSG00000034889.9_81158734_81161708_1	chr10	+	1541	8	ISM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	1797	368	1797	-368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGCTTCCGCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	81158733	81161708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
ENSMUSG00000034889.9_81158992_81161817_1	chr10	+	1507	7	ISM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	2055	259	2055	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCCTGGACAGCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	81158991	81161817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
ENSMUSG00000034889.9_81159560_81162076_1	chr10	+	1550	6	ISM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	2623	0	2623	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTGATCTGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	81159559	81162076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
ENSMUSG00000034893.10_75939810_75959603_1	chr14	-	1027	8	ISM	ENSMUSG00000034893.10	ENST00000349995.10	2893	23	32359	35	32359	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGATCTTTGCTTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	75959603	75939809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_75940127_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541
ENSMUSG00000034893.10_75939924_75966765_1	chr14	-	2601	11	ISM	ENSMUSG00000034893.10	ENSMUST00000049168.9	4268	23	25233	114	25197	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCACGTGTTTACTTAT	NA	NA	NA	NA	NA	NA	NA	NA	75966765	75939923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710
ENSMUSG00000034893.10_75939958_75962192_1	chr14	-	949	9	ISM	ENSMUSG00000034893.10	ENST00000349995.10	2893	23	29770	183	29770	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTGCTGAATGAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	75962192	75939957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_75940127_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150
ENSMUSG00000034893.10_75940080_75965196_1	chr14	-	959	10	ISM	ENSMUSG00000034893.10	ENST00000349995.10	2893	23	26766	305	26766	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGCAGTCTGATGGACA	NA	NA	NA	NA	NA	NA	NA	NA	75965196	75940079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_75940127_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147
ENSMUSG00000034893.10_75940110_75968130_1	chr14	-	2617	12	ISM	ENSMUSG00000034893.10	ENSMUST00000049168.9	4268	23	23868	300	23832	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGGACGTGACCGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	75968130	75940109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034
ENSMUSG00000034893.10_75940186_75968164_1	chr14	-	2575	12	ISM	ENSMUSG00000034893.10	ENSMUST00000049168.9	4268	23	23834	376	23798	-376	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTATGTGATAAACCATAA	NA	NA	NA	NA	NA	NA	NA	NA	75968164	75940185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034
ENSMUSG00000034893.10_75941286_75991807_1	chr14	-	2601	23	FSM	ENSMUSG00000034893.10	ENSMUST00000049168.9	4268	23	191	1476	155	-1476	multi-exon	FALSE	canonical	NA	NA	NA	NA	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCATTGAACTGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	75991807	75941285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
ENSMUSG00000034893.10_75944610_75966787_1	chr14	-	966	10	ISM	ENSMUSG00000034893.10	ENST00000349995.10	2893	23	25175	4835	25175	-4800	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAAGTTCCACGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	75966787	75944609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710
ENSMUSG00000034893.10_75950641_75968174_1	chr14	-	1043	9	ISM	ENSMUSG00000034893.10	ENST00000349995.10	2893	23	23788	10866	23788	-10831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGGGGTTTTATTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	75968174	75950640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034
ENSMUSG00000034893.10_75954393_75969489_1	chr14	-	956	9	ISM	ENSMUSG00000034893.10	ENST00000349995.10	2893	23	22473	14618	22473	-14583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGCACCTGAAGTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75969489	75954392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415
ENSMUSG00000034893.10_75957203_75975447_1	chr14	-	980	10	ISM	ENSMUSG00000034893.10	ENST00000349995.10	2893	23	16515	17428	16515	-17393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAAATTGCTCCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	75975447	75957202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402
ENSMUSG00000034893.10_75959574_75976986_1	chr14	-	977	10	ISM	ENSMUSG00000034893.10	ENST00000349995.10	2893	23	14976	19799	14976	-19764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAGCATCAGAGTCTATC	NA	NA	NA	NA	NA	NA	NA	NA	75976986	75959573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943
ENSMUSG00000034893.10_75965146_75978068_1	chr14	-	972	9	ISM	ENSMUSG00000034893.10	ENST00000349995.10	2893	23	13894	25371	13894	-25336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTATGATGACTTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	75978068	75965145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975
ENSMUSG00000034893.10_75966794_75979899_1	chr14	-	975	10	ISM	ENSMUSG00000034893.10	ENST00000349995.10	2893	23	12063	27019	12063	-26984	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTACATTCAGACGGAC	NA	NA	NA	NA	NA	NA	NA	NA	75979899	75966793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780
ENSMUSG00000034893.10_75968035_75981067_1	chr14	-	1006	10	ISM	ENSMUSG00000034893.10	ENST00000349995.10	2893	23	10895	28260	10895	-28225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATACGCAGAAGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	75981067	75968034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005
ENSMUSG00000034893.10_75969416_75984639_1	chr14	-	1013	10	ISM	ENSMUSG00000034893.10	ENST00000349995.10	2893	23	7323	29641	7323	-29606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTGATAACATGGAATA	NA	NA	NA	NA	NA	NA	NA	NA	75984639	75969415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492
ENSMUSG00000034893.10_75970462_75991846_1	chr14	-	952	10	ISM	ENSMUSG00000034893.10	ENST00000349995.10	2893	23	116	30687	116	-30652	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACATCCACCAGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	75991846	75970461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
ENSMUSG00000034906.16_126945729_126968127_1	chr2	-	2255	15	NNC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	7747	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCAGTATTAGCGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	126968127	126945728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966755_126966876_126967470_126967607_126968034
ENSMUSG00000034906.16_126945747_126969114_1	chr2	-	2333	16	ISM	ENSMUSG00000034906.16	ENSMUST00000110387.4	2695	18	6760	18	6760	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAGTGCCCAGTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	126969114	126945746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023
ENSMUSG00000034906.16_126946019_126969618_1	chr2	-	2275	17	ISM	ENSMUSG00000034906.16	ENSMUST00000110387.4	2695	18	6256	290	6256	-290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAAGCTCCATGCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	126969618	126946018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404
ENSMUSG00000034906.16_126946135_126975824_1	chr2	-	2239	18	FSM	ENSMUSG00000034906.16	ENSMUST00000110387.4	2695	18	50	406	50	-406	multi-exon	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGACGTCTGCAGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	126975824	126946134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ENSMUSG00000034923.10_35299824_35302480_1	chr17	-	822	4	ISM	ENSMUSG00000034923.10	ENSMUST00000038507.7	1141	6	2106	368	3	1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1925	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGTAGCCTTAAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	35302480	35299823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35299890_35300035_35300198_35301803_35302068_35302150
ENSMUSG00000034923.10_35299824_35302480_2	chr17	-	814	4	NNC	ENSMUSG00000034923.10	novel	1141	6	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGTAGCCTTAAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	35302480	35299823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_35299890_35300035_35300198_35301803_35302060_35302150
ENSMUSG00000034928.17_54827701_54829950_1	chr13	-	2049	3	ISM	ENSMUSG00000034928.17	ENST00000274811.9	4111	11	5649	476	5649	-474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAACTTCTGGCCTAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	54829950	54827700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54829625_54829746_54829847_54829925
ENSMUSG00000034928.17_54827903_54830424_1	chr13	-	2064	5	ISM	ENSMUSG00000034928.17	ENST00000274811.9	4111	11	5175	678	5175	-676	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGTGTCGGCTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	54830424	54827902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392
ENSMUSG00000034928.17_54828205_54830925_1	chr13	-	2084	7	ISM	ENSMUSG00000034928.17	ENST00000274811.9	4111	11	4674	980	4674	-978	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCCGGCACATCCTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	54830925	54828204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855
ENSMUSG00000034928.17_54828464_54831545_1	chr13	-	2070	8	ISM	ENSMUSG00000034928.17	ENSMUST00000125871.8	4292	11	4362	1250	4054	914	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTCTGCTTTTCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	54831545	54828463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407
ENSMUSG00000034928.17_54828788_54832220_1	chr13	-	2036	10	ISM	ENSMUSG00000034928.17	ENSMUST00000125871.8	4292	11	3687	1574	3379	590	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGAATGTGAGGAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	54832220	54828787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831964_54832150
ENSMUSG00000034928.17_54828823_54832269_1	chr13	-	2050	10	ISM	ENSMUSG00000034928.17	ENSMUST00000125871.8	4292	11	3638	1609	3330	555	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACCCATGCTCGATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	54832269	54828822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831964_54832150
ENSMUSG00000034928.17_54829070_54835467_1	chr13	-	2137	11	NIC	ENSMUSG00000034928.17	novel	4111	11	NA	NA	132	308	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTTCCAGACAGACATAG	NA	NA	NA	NA	NA	NA	NA	NA	54835467	54829069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831964_54832150_54832302_54835165
ENSMUSG00000034930.17_83112793_83129189_1	chr6	+	1820	12	FSM	ENSMUSG00000034930.17	ENSMUST00000065512.11	2191	12	0	371	0	-367	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGTGTGAGAGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	83112792	83129189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_83113041_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ENSMUSG00000034930.17_83114213_83129560_2	chr6	+	2583	13	NNC	ENSMUSG00000034930.17	novel	2586	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTCTTTCACTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	83114212	83129560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_83114438_83114812_83115228_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ENSMUSG00000034930.17_83114213_83129560_3	chr6	+	2582	13	NNC	ENSMUSG00000034930.17	novel	2586	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTCTTTCACTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	83114212	83129560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_83114438_83114805_83115228_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128874
ENSMUSG00000034930.17_83114213_83129560_4	chr6	+	2584	13	NNC	ENSMUSG00000034930.17	novel	2586	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTCTTTCACTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	83114212	83129560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_83114438_83114805_83115228_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126534_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ENSMUSG00000034930.17_83114213_83129560_5	chr6	+	2590	13	FSM	ENSMUSG00000034930.17	ENST00000305557.9	2586	13	0	-4	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTCTTTCACTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	83114212	83129560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_83114438_83114805_83115228_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ENSMUSG00000034930.17_83114213_83129560_6	chr6	+	2588	13	NNC	ENSMUSG00000034930.17	novel	2586	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	866	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTCTTTCACTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	83114212	83129560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_83114438_83114805_83115228_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126654_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ENSMUSG00000034932.5_81100547_81102768_1	chr10	-	596	3	NNC	ENSMUSG00000034932.5	novel	604	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCATGCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	81102768	81100546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_81100832_81101484_81101634_81102606
ENSMUSG00000034940.16_83855302_83880649_1	chr11	+	802	8	ISM	ENSMUSG00000034940.16	ENST00000619541.4	3733	21	7	51147	0	-51105	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCACTAAGGAGGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	83855301	83880649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83878738_83878817_83880505
ENSMUSG00000034940.16_83867955_83881540_1	chr11	+	717	7	ISM	ENSMUSG00000034940.16	ENST00000619541.4	3733	21	12660	50256	12653	-50214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGATGCTTTGAGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	83867954	83881540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83878738_83878817_83880505_83880703_83881520
ENSMUSG00000034940.16_83867996_83881697_1	chr11	+	833	7	ISM	ENSMUSG00000034940.16	ENST00000619541.4	3733	21	12701	50099	12694	-50057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGGACCAGTGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	83867995	83881697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83878738_83878817_83880505_83880703_83881520
ENSMUSG00000034940.16_83872278_83885288_1	chr11	+	841	6	ISM	ENSMUSG00000034940.16	ENST00000619541.4	3733	21	16983	46508	16976	-46466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAACAGAGTTGAATATG	NA	NA	NA	NA	NA	NA	NA	NA	83872277	83885288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83872349_83873021_83873134_83878738_83878817_83880505_83880703_83881520_83881770_83885154
ENSMUSG00000034940.16_83873020_83892796_1	chr11	+	885	6	ISM	ENSMUSG00000034940.16	ENST00000619541.4	3733	21	17725	39000	17718	-38958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGACAATTTGTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	83873019	83892796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83873134_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683
ENSMUSG00000034940.16_83880518_83899499_1	chr11	+	800	6	ISM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	25216	32255	25216	-32255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCGCCGATAGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	83880517	83899499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443
ENSMUSG00000034940.16_83880637_83899507_1	chr11	+	689	6	ISM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	25335	32247	25335	-32247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATAGTGTGTCACCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	83880636	83899507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443
ENSMUSG00000034940.16_83880637_83899566_1	chr11	+	748	6	ISM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	25335	32188	25335	-32188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGCTGCACAGCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	83880636	83899566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443
ENSMUSG00000034940.16_83881573_83899714_1	chr11	+	778	5	ISM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	26271	32040	26271	-32040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCAGCGGGCTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	83881572	83899714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443
ENSMUSG00000034940.16_83881672_83899771_1	chr11	+	736	5	ISM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	26370	31983	26370	-31983	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCAGATGATTTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	83881671	83899771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443
ENSMUSG00000034940.16_83892709_83900002_1	chr11	+	710	3	ISM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	37407	31752	37407	-31752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTCTTCAAACAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	83892708	83900002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83892797_83892998_83893062_83899443
ENSMUSG00000034940.16_83892997_83900125_1	chr11	+	747	2	ISM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	37695	31629	37695	-31629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGAGCTCAGACAAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	83892996	83900125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83893062_83899443
ENSMUSG00000034940.16_83899731_83910260_1	chr11	+	721	2	ISM	ENSMUSG00000034940.16	ENST00000619541.4	3733	21	44436	21536	44429	-21494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTCAGACAGGGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	83899730	83910260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83900377_83910185
ENSMUSG00000034940.16_83899992_83910524_1	chr11	+	724	2	ISM	ENSMUSG00000034940.16	ENST00000619541.4	3733	21	44697	21272	44690	-21230	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTTCCAGGATTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	83899991	83910524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83900377_83910185
ENSMUSG00000034940.16_83900161_83910694_1	chr11	+	725	2	ISM	ENSMUSG00000034940.16	ENST00000619541.4	3733	21	44866	21102	44859	-21060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTAGCTAATTCCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	83900160	83910694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83900377_83910185
ENSMUSG00000034940.16_83900206_83914125_1	chr11	+	804	3	ISM	ENSMUSG00000034940.16	ENST00000619541.4	3733	21	44911	17671	44904	-17629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCCGGTCCTCTCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	83900205	83914125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83900377_83910185_83910780_83914086
ENSMUSG00000034940.16_83900269_83914167_1	chr11	+	783	3	ISM	ENSMUSG00000034940.16	ENST00000619541.4	3733	21	44974	17629	44967	-17587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCGGTCCAACACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	83900268	83914167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83900377_83910185_83910780_83914086
ENSMUSG00000034940.16_83900352_83914189_1	chr11	+	722	3	ISM	ENSMUSG00000034940.16	ENST00000619541.4	3733	21	45057	17607	45050	-17565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGAGGGCTGCGCTGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	83900351	83914189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83900377_83910185_83910780_83914086
ENSMUSG00000034940.16_83910262_83915862_1	chr11	+	778	4	ISM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	54960	15892	54960	-15892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTGTTTGCACAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	83910261	83915862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83910780_83914086_83914251_83915103_83915158_83915820
ENSMUSG00000034940.16_83910363_83917494_1	chr11	+	783	5	ISM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	55061	14260	55061	-14260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCTGTGTGTAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	83910362	83917494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443
ENSMUSG00000034940.16_83910651_83931754_1	chr11	+	836	7	ISM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	55349	0	55349	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGCTCAATGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	83910650	83931754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ENSMUSG00000034940.16_83910693_83931783_1	chr11	+	823	7	ISM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	55391	-29	55391	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTCACAGGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	83910692	83931783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ENSMUSG00000034947.14_101473370_101482199_1	chr11	+	1886	8	ISM	ENSMUSG00000034947.14	ENSMUST00000039581.14	2304	9	302	415	302	-415	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATTTCCTTCCTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	101473369	101482199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101473531_101474383_101474611_101475271_101475336_101477064_101477219_101479678_101479820_101479923_101479968_101480760_101480815_101481158
ENSMUSG00000034973.17_86349264_86374166_1	chr9	+	853	5	ISM	ENSMUSG00000034973.17	ENST00000237163.9	7969	39	21	62514	21	-62514	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAACTTTCAATGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	86349263	86374166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86349358_86367383_86367657_86369306_86369489_86371630_86371802_86374033
ENSMUSG00000034973.17_86369317_86385114_1	chr9	+	884	7	ISM	ENSMUSG00000034973.17	ENST00000237163.9	7969	39	20074	51566	1857	-51566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGTATTTTAATCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	86369316	86385114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383953_86384037_86385045
ENSMUSG00000034973.17_86371651_86386350_1	chr9	+	853	7	ISM	ENSMUSG00000034973.17	ENST00000237163.9	7969	39	22408	50330	4191	-50330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGATTGCTAAAACTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	86371650	86386350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383953_86384037_86385045_86385155_86386229
ENSMUSG00000034973.17_86374051_86388514_1	chr9	+	862	8	ISM	ENSMUSG00000034973.17	ENST00000237163.9	7969	39	24808	48166	6591	-48166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACAACTGACTAATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	86374050	86388514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86374224_86376448_86376548_86382848_86382949_86383953_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457
ENSMUSG00000034973.17_86374131_86388560_1	chr9	+	828	8	ISM	ENSMUSG00000034973.17	ENST00000237163.9	7969	39	24888	48120	6671	-48120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTCTCCTTGGTAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	86374130	86388560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86374224_86376448_86376548_86382848_86382949_86383953_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457
ENSMUSG00000034973.17_86376487_86389638_1	chr9	+	821	9	ISM	ENSMUSG00000034973.17	ENST00000237163.9	7969	39	27244	47042	9027	-47042	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCGCTTATCTGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	86376486	86389638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86376548_86382848_86382949_86383953_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86388923_86388954_86389556
ENSMUSG00000034973.17_86385052_86394739_1	chr9	+	849	7	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	17592	43120	17592	-41941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGACAGAGAGCTGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	86385051	86394739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86388923_86388954_86389556_86389791_86394613
ENSMUSG00000034973.17_86394972_86400246_1	chr9	+	827	5	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	27512	37613	27512	-36434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTACGAGCTCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	86394971	86400246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206
ENSMUSG00000034973.17_86395041_86400315_1	chr9	+	827	5	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	27581	37544	27581	-36365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAACCACTGTTACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	86395040	86400315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206
ENSMUSG00000034973.17_86395105_86400372_1	chr9	+	820	5	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	27645	37487	27645	-36308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGGTACAAGCAGAACGGTA	NA	NA	NA	NA	NA	NA	NA	NA	86395104	86400372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206
ENSMUSG00000034973.17_86395910_86402001_1	chr9	+	830	5	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	28450	35858	28450	-34679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTACTGTTAATCCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	86395909	86402001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925
ENSMUSG00000034973.17_86396072_86402146_1	chr9	+	813	5	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	28612	35713	28612	-34534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAGACAACTTTAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	86396071	86402146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925
ENSMUSG00000034973.17_86397374_86402301_1	chr9	+	824	4	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	29914	35558	29914	-34379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGTTACATCTGAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	86397373	86402301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86397464_86399019_86399118_86400206_86400467_86401925
ENSMUSG00000034973.17_86399056_86402419_1	chr9	+	816	3	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	31596	35440	31596	-34261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCGATGACAGCCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	86399055	86402419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86399118_86400206_86400467_86401925
ENSMUSG00000034973.17_86400402_86402678_1	chr9	+	818	2	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	32942	35181	32942	-34002	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACCCAAAGTAAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	86400401	86402678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86400467_86401925
ENSMUSG00000034973.17_86403194_86405057_1	chr9	+	882	3	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	35734	32802	35734	-31623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCAATCCTTCACATGAT	NA	NA	NA	NA	NA	NA	NA	NA	86403193	86405057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86403913_86404815_86404928_86405006
ENSMUSG00000034973.17_86403405_86406301_1	chr9	+	828	4	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	35945	31558	35945	-30379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGGACCCATTTCAATG	NA	NA	NA	NA	NA	NA	NA	NA	86403404	86406301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86403913_86404815_86404928_86405006_86405190_86406276
ENSMUSG00000034973.17_86403479_86406361_1	chr9	+	814	4	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	36019	31498	36019	-30319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATGAAAGAAGACAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	86403478	86406361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86403913_86404815_86404928_86405006_86405190_86406276
ENSMUSG00000034973.17_86403782_86415071_1	chr9	+	832	7	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	36322	22788	36322	-21609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTTATACTTGGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	86403781	86415071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982
ENSMUSG00000034973.17_86405007_86418575_1	chr9	+	897	8	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	37547	19284	37547	-18105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACATTATCAAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	86405006	86418575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495
ENSMUSG00000034973.17_86405127_86424452_1	chr9	+	818	9	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	37667	13407	37667	-12228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGCGTGTTATCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	86405126	86424452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411
ENSMUSG00000034973.17_86424463_86433745_1	chr9	+	829	8	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	57003	4114	57003	-2935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAGAAGGCAGGGCATA	NA	NA	NA	NA	NA	NA	NA	NA	86424462	86433745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698
ENSMUSG00000034973.17_86427332_86436243_1	chr9	+	829	7	ISM	ENSMUSG00000034973.17	ENST00000237163.9	7969	39	78089	437	59872	-437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTACCCAAACTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	86427331	86436243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86435450_86435502_86436068
ENSMUSG00000034973.17_86427401_86436281_1	chr9	+	798	7	ISM	ENSMUSG00000034973.17	ENST00000237163.9	7969	39	78158	399	59941	-399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAGAATCACAAAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	86427400	86436281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86435450_86435502_86436068
ENSMUSG00000034973.17_86430273_86436385_1	chr9	+	806	6	ISM	ENSMUSG00000034973.17	ENST00000237163.9	7969	39	81030	295	62813	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCTCCAGAGCCTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	86430272	86436385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86435450_86435502_86436068
ENSMUSG00000034973.17_86430312_86436459_1	chr9	+	841	6	ISM	ENSMUSG00000034973.17	ENST00000237163.9	7969	39	81069	221	62852	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGTGTATATGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	86430311	86436459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86435450_86435502_86436068
ENSMUSG00000034973.17_86432112_86436683_1	chr9	+	905	4	ISM	ENSMUSG00000034973.17	ENST00000237163.9	7969	39	82869	-3	64652	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTCTCAAGCCTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	86432111	86436683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86432221_86433698_86433829_86435450_86435502_86436068
ENSMUSG00000034973.17_86432148_86436683_1	chr9	+	869	4	ISM	ENSMUSG00000034973.17	ENST00000237163.9	7969	39	82905	-3	64688	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTCTCAAGCCTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	86432147	86436683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_86432221_86433698_86433829_86435450_86435502_86436068
ENSMUSG00000034981.10_91741799_91770967_1	chr5	+	817	3	ISM	ENSMUSG00000034981.10	ENSMUST00000040576.10	5068	4	76325	3786	76325	-3786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGACAATCGCGAGCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	91741798	91770967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_91742361_91760856_91760936_91770791
ENSMUSG00000034990.16_120693821_120721204_1	chr7	+	1025	8	NNC	ENSMUSG00000034990.16	novel	3457	25	NA	NA	1928	-41104	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGCAGTGCACAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	120693820	120721204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_120693889_120698358_120698491_120701721_120701958_120705094_120705199_120710194_120710296_120713692_120713839_120717764_120717889_120721090
ENSMUSG00000034990.16_120701878_120726953_1	chr7	+	1038	8	NNC	ENSMUSG00000034990.16	novel	3457	25	NA	NA	9985	-35355	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTACAGTCCTGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	120701877	120726953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_120701958_120705094_120705199_120710194_120710296_120713692_120713839_120717764_120717889_120721090_120721307_120724642_120724811_120726854
ENSMUSG00000034990.16_120713715_120731661_1	chr7	+	1024	8	NNC	ENSMUSG00000034990.16	novel	3457	25	NA	NA	-21421	-30647	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGAACATCGAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	120713714	120731661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_120713839_120717764_120717889_120721090_120721307_120724642_120724811_120726854_120726996_120729257_120729317_120730489_120730608_120731587
ENSMUSG00000034990.16_120721094_120733260_1	chr7	+	1019	8	ISM	ENSMUSG00000034990.16	ENST00000388958.8	3457	25	29201	29049	-14042	-29048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCATGGTCTTAGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	120721093	120733260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120721307_120724642_120724811_120726854_120726996_120729257_120729317_120730489_120730608_120731587_120731662_120732009_120732146_120733150
ENSMUSG00000034990.16_120726925_120744814_1	chr7	+	1013	9	ISM	ENSMUSG00000034990.16	ENST00000388958.8	3457	25	35032	17495	-8211	-17494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCAGCCGGGCTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	120726924	120744814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120726996_120729257_120729317_120730489_120730608_120731587_120731662_120732009_120732146_120733150_120733342_120738999_120739094_120743075_120743206_120744674
ENSMUSG00000034990.16_120730521_120746963_1	chr7	+	1008	8	ISM	ENSMUSG00000034990.16	ENST00000388958.8	3457	25	38628	15346	-4615	-15345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACCGTGGCATCCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	120730520	120746963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120730608_120731587_120731662_120732009_120732146_120733150_120733342_120738999_120739094_120743075_120743206_120744674_120744863_120746855
ENSMUSG00000034990.16_120731587_120754409_1	chr7	+	1028	8	ISM	ENSMUSG00000034990.16	ENST00000388958.8	3457	25	39694	7900	-3549	-7899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTTCCATTTGGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	120731586	120754409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120731662_120732009_120732146_120733150_120733342_120738999_120739094_120743075_120743206_120744674_120744863_120746855_120747012_120754351
ENSMUSG00000034990.16_120739001_120759625_1	chr7	+	1018	8	ISM	ENSMUSG00000034990.16	ENST00000550753.5	1417	10	3865	2683	3865	-2683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCAGCTCGGCACAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	120739000	120759625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120739094_120743075_120743206_120744674_120744863_120746855_120747012_120754351_120754495_120754997_120755135_120755650_120755749_120759552
ENSMUSG00000034990.16_120744681_120762314_1	chr7	+	1137	7	ISM	ENSMUSG00000034990.16	ENST00000550753.5	1417	10	9545	-6	9545	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGTCTGTCTCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	120744680	120762314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120744863_120746855_120747012_120754351_120754495_120754997_120755135_120755650_120755749_120759552_120759749_120762089
ENSMUSG00000034990.16_120744716_120755669_1	chr7	+	602	5	ISM	ENSMUSG00000034990.16	ENST00000550753.5	1417	10	9580	6639	9580	-6639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCCGAATGCTCAACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	120744715	120755669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120744863_120746855_120747012_120754351_120754495_120754997_120755135_120755650
ENSMUSG00000034990.16_120744730_120762314_1	chr7	+	1088	7	ISM	ENSMUSG00000034990.16	ENST00000550753.5	1417	10	9594	-6	9594	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGTCTGTCTCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	120744729	120762314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120744863_120746855_120747012_120754351_120754495_120754997_120755135_120755650_120755749_120759552_120759749_120762089
ENSMUSG00000034990.16_120746923_120759693_1	chr7	+	608	5	ISM	ENSMUSG00000034990.16	ENST00000550753.5	1417	10	11787	2615	11787	-2615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGATCCTCTGAGTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	120746922	120759693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120747012_120754351_120754495_120754997_120755135_120755650_120755749_120759552
ENSMUSG00000034993.8_101350178_101351279_1	chr11	-	1002	2	ISM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	5777	607	5777	-607	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTCCAACACTGCCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	101351279	101350177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101351103_101351202
ENSMUSG00000034993.8_101350317_101353073_1	chr11	-	1078	3	ISM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	3983	746	3983	-746	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGTGCCTTAGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	101353073	101350316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101351103_101351202_101351445_101353023
ENSMUSG00000034993.8_101350530_101353324_1	chr11	-	1014	4	ISM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	3732	959	3732	-959	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATCCCCGCAGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	101353324	101350529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101351103_101351202_101351445_101353023_101353114_101353215
ENSMUSG00000034993.8_101350694_101353825_1	chr11	-	1003	5	ISM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	3231	1123	3231	-1123	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTTTTGTGCCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	101353825	101350693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101351103_101351202_101351445_101353023_101353114_101353215_101353387_101353734
ENSMUSG00000034993.8_101350808_101353936_1	chr11	-	1000	5	ISM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	3120	1237	3120	-1237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGAGAGGTTGGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	101353936	101350807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101351103_101351202_101351445_101353023_101353114_101353215_101353387_101353734
ENSMUSG00000034993.8_101350916_101356652_1	chr11	-	1017	6	FSM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	404	1345	404	-1345	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCCTCCCTCCCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	101356652	101350915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101351103_101351202_101351445_101353023_101353114_101353215_101353387_101353734_101353943_101356533
ENSMUSG00000034993.8_101350982_101356742_1	chr11	-	1041	6	FSM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	314	1411	314	-1411	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGGGAAGTCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	101356742	101350981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101351103_101351202_101351445_101353023_101353114_101353215_101353387_101353734_101353943_101356533
ENSMUSG00000034993.8_101351233_101356888_1	chr11	-	1036	5	ISM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	168	1662	168	-1662	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATTGACTCAGTCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	101356888	101351232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101351445_101353023_101353114_101353215_101353387_101353734_101353943_101356533
ENSMUSG00000034993.8_101351305_101356949_1	chr11	-	1025	5	ISM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	107	1734	107	-1734	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGGTGGAACTCGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	101356949	101351304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101351445_101353023_101353114_101353215_101353387_101353734_101353943_101356533
ENSMUSG00000034993.8_101351368_101357056_1	chr11	-	1069	5	ISM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	0	1797	0	-1797	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTCTGCAGCTGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	101357056	101351367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101351445_101353023_101353114_101353215_101353387_101353734_101353943_101356533
ENSMUSG00000034994.11_81012465_81014577_1	chr10	+	559	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	0	3755	0	-3755	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	836	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGATGAACAAGATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	81012464	81014577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514
ENSMUSG00000034994.11_81013589_81014929_1	chr10	+	534	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	1124	3403	1124	-3403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCACCGTAGGCTTTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	81013588	81014929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81013714_81013886_81014069_81014514_81014727_81014914
ENSMUSG00000034994.11_81013646_81014973_1	chr10	+	521	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	1181	3359	1181	-3359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1021	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGCAGTTTGCGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	81013645	81014973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81013714_81013886_81014069_81014514_81014727_81014914
ENSMUSG00000034994.11_81013699_81015022_1	chr10	+	517	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	1234	3310	1234	-3310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCCAGCTGAGCGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	81013698	81015022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81013714_81013886_81014069_81014514_81014727_81014914
ENSMUSG00000034994.11_81013979_81015261_1	chr10	+	563	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	1514	3071	1514	-3071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATCCTGGACCCCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	81013978	81015261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81014069_81014514_81014727_81014914_81015094_81015179
ENSMUSG00000034994.11_81014539_81015443_1	chr10	+	539	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	2074	2889	2074	-2889	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGGACAGCGAGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	81014538	81015443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81014727_81014914_81015094_81015179_81015286_81015377
ENSMUSG00000034994.11_81014598_81015485_1	chr10	+	522	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	2133	2847	2133	-2847	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGCTGTGATGCGCCG	NA	NA	NA	NA	NA	NA	NA	NA	81014597	81015485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81014727_81014914_81015094_81015179_81015286_81015377
ENSMUSG00000034994.11_81014639_81015545_1	chr10	+	541	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	2174	2787	2174	-2787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACTTACCATCCCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	81014638	81015545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81014727_81014914_81015094_81015179_81015286_81015377
ENSMUSG00000034994.11_81014957_81015741_1	chr10	+	522	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	2492	2591	2492	-2591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTATGATGTACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	81014956	81015741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81015094_81015179_81015286_81015377_81015631_81015715
ENSMUSG00000034994.11_81015007_81015792_1	chr10	+	523	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	2542	2540	2542	-2540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATGCCTTTGGTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	81015006	81015792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81015094_81015179_81015286_81015377_81015631_81015715
ENSMUSG00000034994.11_81015050_81015850_1	chr10	+	538	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	2585	2482	2585	-2482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGGCCCCAACTACACG	NA	NA	NA	NA	NA	NA	NA	NA	81015049	81015850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81015094_81015179_81015286_81015377_81015631_81015715
ENSMUSG00000034994.11_81015233_81016044_1	chr10	+	560	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	2768	2288	2768	-2288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1470	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGGGCTGGTCGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	81015232	81016044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81015286_81015377_81015631_81015715_81015912_81015986
ENSMUSG00000034994.11_81015418_81016088_1	chr10	+	511	3	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	2953	2244	2953	-2244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1065	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATCACTACCTTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	81015417	81016088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81015631_81015715_81015912_81015986
ENSMUSG00000034994.11_81015592_81016462_1	chr10	+	558	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	3127	1870	3127	-1870	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGGACCTGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	81015591	81016462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81015631_81015715_81015912_81015986_81016246_81016398
ENSMUSG00000034994.11_81015869_81016698_1	chr10	+	471	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	3404	1634	3404	-1634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCAAGTCCCCCAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	81015868	81016698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81015912_81015986_81016246_81016398_81016507_81016637
ENSMUSG00000034994.11_81015985_81016860_1	chr10	+	592	3	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	3520	1472	3520	-1472	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1678	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCAAGATCTGGTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	81015984	81016860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81016246_81016398_81016507_81016637
ENSMUSG00000034994.11_81016211_81017087_1	chr10	+	523	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	3746	1245	3746	-1245	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGCGGTTTGATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	81016210	81017087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81016246_81016398_81016507_81016637_81016992_81017061
ENSMUSG00000034994.11_81016433_81017150_1	chr10	+	517	3	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	3968	1182	3968	-1182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGATCATCCCCACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	81016432	81017150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81016507_81016637_81016992_81017061
ENSMUSG00000034994.11_81016740_81017432_1	chr10	+	541	3	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	4275	900	4275	-900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACCTGCCTGTCAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	81016739	81017432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81016992_81017061_81017245_81017326
ENSMUSG00000034994.11_81016885_81017868_1	chr10	+	569	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	4420	464	4420	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1537	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAGAGGGCATCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	81016884	81017868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81016992_81017061_81017245_81017326_81017460_81017722
ENSMUSG00000034994.11_81017325_81018075_1	chr10	+	488	2	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	4860	257	4860	-257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	863	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTCTGCAGGCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	81017324	81018075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81017460_81017722
ENSMUSG00000034994.11_81017353_81018148_1	chr10	+	533	2	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	4888	184	4888	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCAGATGTCCAAAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	81017352	81018148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81017460_81017722
ENSMUSG00000034994.11_81017421_81018181_1	chr10	+	498	2	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	4956	151	4956	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1052	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTTTTTGGGGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	81017420	81018181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81017460_81017722
ENSMUSG00000035000.9_62163007_62178234_1	chr2	-	342	5	ISM	ENSMUSG00000035000.9	ENST00000678668.1	3070	23	38628	1031	38628	-1031	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCACATGAGCCATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	62178234	62163006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161
ENSMUSG00000035000.9_62164959_62182540_1	chr2	-	350	5	ISM	ENSMUSG00000035000.9	ENST00000678668.1	3070	23	34322	2983	34322	-2983	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGGAACGGCAGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	62182540	62164958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465
ENSMUSG00000035000.9_62182492_62187058_1	chr2	-	338	3	ISM	ENSMUSG00000035000.9	ENST00000678668.1	3070	23	29804	20516	29804	-20516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAAGATCAAATTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	62187058	62182491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62182661_62184882_62184953_62186959
ENSMUSG00000035000.9_62187005_62190687_1	chr2	-	337	5	ISM	ENSMUSG00000035000.9	ENST00000678668.1	3070	23	26175	25029	26175	-25029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGCCTTCAAAAAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	62190687	62187004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628
ENSMUSG00000035000.9_62189173_62193050_1	chr2	-	352	5	ISM	ENSMUSG00000035000.9	ENST00000678668.1	3070	23	23812	27197	23812	-27197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATTTAGTAAAGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	62193050	62189172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005
ENSMUSG00000035000.9_62189621_62195354_1	chr2	-	350	5	ISM	ENSMUSG00000035000.9	ENST00000678668.1	3070	23	21508	27645	21508	-27645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGTGCTGCTGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	62195354	62189620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195279
ENSMUSG00000035000.9_62190970_62203197_1	chr2	-	363	4	ISM	ENSMUSG00000035000.9	ENST00000678668.1	3070	23	13665	28994	13665	-28994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCCGAAAGATAAGAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	62203197	62190969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62191061_62193005_62193051_62195279_62195408_62203098
ENSMUSG00000035000.9_62195382_62208601_1	chr2	-	354	4	ISM	ENSMUSG00000035000.9	ENST00000678668.1	3070	23	8261	33406	8261	-33406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGCTACAGAAGAAAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	62208601	62195381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62195408_62203098_62203212_62204709_62204871_62208547
ENSMUSG00000035007.6_101316068_101324770_1	chr11	+	1337	5	FSM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	157	1729	157	-1729	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCCGGCCCGGAAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	101316067	101324770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101316437_101320277_101320437_101322173_101322373_101322907_101323025_101324277
ENSMUSG00000035007.6_101316162_101324824_1	chr11	+	1297	5	FSM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	251	1675	251	-1675	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTGACCCCCAAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	101316161	101324824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101316437_101320277_101320437_101322173_101322373_101322907_101323025_101324277
ENSMUSG00000035007.6_101316218_101324895_1	chr11	+	1312	5	FSM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	307	1604	307	-1604	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCGCTGACTCAGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	101316217	101324895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101316437_101320277_101320437_101322173_101322373_101322907_101323025_101324277
ENSMUSG00000035007.6_101320335_101325170_1	chr11	+	1311	4	ISM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	4424	1329	4424	-1329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTTGCTCTAAAGACGTA	NA	NA	NA	NA	NA	NA	NA	NA	101320334	101325170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101320437_101322173_101322373_101322907_101323025_101324277
ENSMUSG00000035007.6_101322230_101325305_1	chr11	+	1288	3	ISM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	6319	1194	6319	-1194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAGACGTGCCAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	101322229	101325305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101322373_101322907_101323025_101324277
ENSMUSG00000035007.6_101322296_101325374_1	chr11	+	1291	3	ISM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	6385	1125	6385	-1125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCCATTATACCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	101322295	101325374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101322373_101322907_101323025_101324277
ENSMUSG00000035007.6_101322931_101325475_1	chr11	+	1292	2	ISM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	7020	1024	7020	-1024	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGCCCAAACACAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	101322930	101325475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101323025_101324277
ENSMUSG00000035011.16_80972105_80980886_1	chr10	+	1520	2	ISM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	0	7170	0	-3391	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGTCACAGAAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	80972104	80980886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80972534_80979795
ENSMUSG00000035011.16_80972105_80980953_1	chr10	+	1587	2	ISM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	0	7103	0	-3324	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGATTCAGGGTGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	80972104	80980953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80972534_80979795
ENSMUSG00000035011.16_80972258_80981004_1	chr10	+	1485	2	ISM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	153	7052	-125	-3273	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGAGAAGCCCTACGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	80972257	80981004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80972534_80979795
ENSMUSG00000035011.16_80972383_80983877_1	chr10	+	1481	3	FSM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	278	4179	0	-400	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCGCGCACAACTACGAC	NA	NA	NA	NA	NA	NA	NA	NA	80972382	80983877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80972534_80979795_80981052_80983803
ENSMUSG00000035011.16_80972412_80983969_1	chr10	+	1544	3	FSM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	307	4087	0	-308	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCGACCATCTGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	80972411	80983969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80972534_80979795_80981052_80983803
ENSMUSG00000035011.16_80980834_80985065_1	chr10	+	1479	2	NNC	ENSMUSG00000035011.16	novel	5938	3	NA	NA	7047	773	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGAGGAGCCGGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	80980833	80985065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80981052_80983804
ENSMUSG00000035021.14_54940336_54945198_1	chr12	-	1258	4	ISM	ENSMUSG00000035021.14	ENST00000360310.6	5659	27	87944	0	87923	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGAATTCTGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	54945198	54940335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122
ENSMUSG00000035021.14_54941078_54947272_1	chr12	-	1305	6	ISM	ENSMUSG00000035021.14	ENST00000360310.6	5659	27	85870	742	85849	-742	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGCAATACGTGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	54947272	54941077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095
ENSMUSG00000035021.14_54941142_54947322_1	chr12	-	1291	6	ISM	ENSMUSG00000035021.14	ENST00000360310.6	5659	27	85820	806	85799	-806	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGGACCAGGTTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	54947322	54941141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095
ENSMUSG00000035021.14_54942871_54958208_1	chr12	-	1286	6	ISM	ENSMUSG00000035021.14	ENST00000360310.6	5659	27	74934	2535	74913	-2535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTACGGCATGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	54958208	54942870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094
ENSMUSG00000035021.14_54945355_54963368_1	chr12	-	1285	7	ISM	ENSMUSG00000035021.14	ENST00000360310.6	5659	27	69774	5019	69753	-5019	internal_fragment	TRUE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCACAGTCCGAGTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	54963368	54945354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252
ENSMUSG00000035021.14_54945415_54963432_1	chr12	-	1289	7	ISM	ENSMUSG00000035021.14	ENST00000360310.6	5659	27	69710	5079	69689	-5079	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAGATCTGCTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	54963432	54945414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252
ENSMUSG00000035021.14_54946920_54963722_1	chr12	-	1275	6	ISM	ENSMUSG00000035021.14	ENST00000360310.6	5659	27	69420	6584	69399	-6584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATGAAGAAATGGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	54963722	54946919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252
ENSMUSG00000035021.14_54947224_54965310_1	chr12	-	1273	6	ISM	ENSMUSG00000035021.14	ENST00000360310.6	5659	27	67832	6888	67811	-6888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTCTAAGTCCATACTG	NA	NA	NA	NA	NA	NA	NA	NA	54965310	54947223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222
ENSMUSG00000035021.14_54955860_54969288_1	chr12	-	1283	7	ISM	ENSMUSG00000035021.14	ENST00000360310.6	5659	27	63854	15524	63833	-15524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTCATTATCTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	54969288	54955859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227
ENSMUSG00000035021.14_54963398_54974462_1	chr12	-	1289	7	ISM	ENSMUSG00000035021.14	ENST00000360310.6	5659	27	58680	23062	58659	-23062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGCACAGCTGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	54974462	54963397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348
ENSMUSG00000035021.14_54963507_54976376_1	chr12	-	1278	8	ISM	ENSMUSG00000035021.14	ENST00000360310.6	5659	27	56766	23171	56745	-23171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCCTTCCTGTCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	54976376	54963506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311
ENSMUSG00000035021.14_54970173_55021970_1	chr12	-	1296	11	ISM	ENSMUSG00000035021.14	ENSMUST00000038926.13	6188	27	11151	30399	11151	-29837	internal_fragment	TRUE	non_canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTATGTGTGGGCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55021970	54970172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54970266_54974348_54974499_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888
ENSMUSG00000035021.14_54976358_55032527_1	chr12	-	1281	10	ISM	ENSMUSG00000035021.14	ENST00000360310.6	5659	27	615	36022	594	-36022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTTTGACCTTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	55032527	54976357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450
ENSMUSG00000035024.17_26952707_26969194_1	chr9	+	1596	12	NIC	ENSMUSG00000035024.17	novel	4012	28	NA	NA	20	-36555	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGTGTCATCCCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	26952706	26969194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26966655_26966842_26967339_26967475_26969156
ENSMUSG00000035024.17_26952771_26969231_1	chr9	+	1569	12	NIC	ENSMUSG00000035024.17	novel	4012	28	NA	NA	84	-36518	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCAAGAGAAGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	26952770	26969231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26966655_26966842_26967339_26967475_26969156
ENSMUSG00000035024.17_26952807_26969296_1	chr9	+	1598	12	NIC	ENSMUSG00000035024.17	novel	4012	28	NA	NA	120	-36453	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTCACAGTGCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	26952806	26969296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26966655_26966842_26967339_26967475_26969156
ENSMUSG00000035024.17_26955899_26974626_1	chr9	+	1594	12	NIC	ENSMUSG00000035024.17	novel	4012	28	NA	NA	3212	-31123	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGATATCCCACACTGA	NA	NA	NA	NA	NA	NA	NA	NA	26955898	26974626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26966655_26966842_26967339_26967475_26969156_26969378_26974559
ENSMUSG00000035024.17_26956344_26974751_1	chr9	+	1644	11	NIC	ENSMUSG00000035024.17	novel	4012	28	NA	NA	3657	-30998	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGCACGCTTACAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	26956343	26974751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26966655_26966842_26967339_26967475_26969156_26969378_26974559
ENSMUSG00000035024.17_26956453_26975119_1	chr9	+	1589	12	NIC	ENSMUSG00000035024.17	novel	4012	28	NA	NA	3766	-30630	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCAAAGCATCTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	26956452	26975119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26966655_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065
ENSMUSG00000035024.17_26956822_26975389_1	chr9	+	1687	12	NIC	ENSMUSG00000035024.17	novel	4012	28	NA	NA	4135	-30360	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCCGCACACCCTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	26956821	26975389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26966655_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272
ENSMUSG00000035024.17_26959538_26980998_1	chr9	+	1590	12	NIC	ENSMUSG00000035024.17	novel	4012	28	NA	NA	6851	-24751	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATGTCCAGCCATAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	26959537	26980998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26966655_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963
ENSMUSG00000035024.17_26962656_26981282_1	chr9	+	1668	11	ISM	ENSMUSG00000035024.17	ENST00000534548.7	4012	28	9969	24467	9969	-24467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTCACGTGGCGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	26962655	26981282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_26962784_26962914_26963172_26966655_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170
ENSMUSG00000035024.17_26962971_26983120_1	chr9	+	1580	11	ISM	ENSMUSG00000035024.17	ENST00000534548.7	4012	28	10284	22629	10284	-22629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATTGTGATATGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	26962970	26983120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_26963172_26966655_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020
ENSMUSG00000035024.17_26963141_26984041_1	chr9	+	1572	12	ISM	ENSMUSG00000035024.17	ENST00000534548.7	4012	28	10454	21708	10454	-21708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGTTCTTCCGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	26963140	26984041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_26963172_26966655_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018
ENSMUSG00000035024.17_26966737_26993752_1	chr9	+	1568	12	ISM	ENSMUSG00000035024.17	ENST00000534548.7	4012	28	14050	11997	14050	-11997	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCCAGCACTTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	26966736	26993752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701
ENSMUSG00000035024.17_26966792_26993815_1	chr9	+	1576	12	ISM	ENSMUSG00000035024.17	ENST00000534548.7	4012	28	14105	11934	14105	-11934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAAGTTTTCCCAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	26966791	26993815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701
ENSMUSG00000035024.17_26967337_26994174_1	chr9	+	1602	12	ISM	ENSMUSG00000035024.17	ENST00000534548.7	4012	28	14650	11575	14650	-11575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAATCTACAAGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	26967336	26994174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125
ENSMUSG00000035024.17_26969228_26994627_1	chr9	+	1626	12	ISM	ENSMUSG00000035024.17	ENST00000534548.7	4012	28	16541	11122	16541	-11122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCAAATGTGGTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	26969227	26994627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479
ENSMUSG00000035024.17_26974558_26998713_1	chr9	+	1674	13	ISM	ENSMUSG00000035024.17	ENST00000534548.7	4012	28	21871	7036	21871	-7036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTGCAGTTGACAAACA	NA	NA	NA	NA	NA	NA	NA	NA	26974557	26998713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677
ENSMUSG00000035024.17_26975064_26998910_1	chr9	+	1679	12	ISM	ENSMUSG00000035024.17	ENST00000534548.7	4012	28	22377	6839	22377	-6839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGAACTTTGCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	26975063	26998910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677
ENSMUSG00000035024.17_26975327_26999727_1	chr9	+	1599	12	ISM	ENSMUSG00000035024.17	ENST00000534548.7	4012	28	22640	6022	22640	-6022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCATGTCTCTCAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	26975326	26999727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998911_26999653
ENSMUSG00000035024.17_26978235_26999862_1	chr9	+	1676	11	ISM	ENSMUSG00000035024.17	ENST00000534548.7	4012	28	25548	5887	25548	-5887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCCTTACGGTTGATAT	NA	NA	NA	NA	NA	NA	NA	NA	26978234	26999862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998911_26999653
ENSMUSG00000035024.17_26980963_27000673_1	chr9	+	1643	11	ISM	ENSMUSG00000035024.17	ENST00000534548.7	4012	28	28276	5076	28276	-5076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAACTAACTAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	26980962	27000673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998911_26999653_26999863_27000595
ENSMUSG00000035024.17_26981171_27005749_1	chr9	+	1580	11	ISM	ENSMUSG00000035024.17	ENST00000534548.7	4012	28	28484	0	28484	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTTTTTTTACCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	26981170	27005749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998911_26999653_26999863_27000595_27000674_27005696
ENSMUSG00000035027.19_80941806_80959679_1	chr10	+	1487	11	NNC	ENSMUSG00000035027.19	novel	1556	11	NA	NA	25	-38	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1866	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAATGAAGAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	80941805	80959679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955329_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
ENSMUSG00000035027.19_80941949_80959717_1	chr10	+	1382	11	NNC	ENSMUSG00000035027.19	novel	1556	11	NA	NA	168	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGCTGTGCTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	80941948	80959717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955329_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
ENSMUSG00000035027.19_80941949_80959717_2	chr10	+	1391	11	FSM	ENSMUSG00000035027.19	ENSMUST00000143517.8	2405	11	200	814	168	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGCTGTGCTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	80941948	80959717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956876_80956945_80957736_80957799_80958400_80958447_80959453
ENSMUSG00000035027.19_80955356_80959844_1	chr10	+	746	5	ISM	ENSMUSG00000035027.19	ENSMUST00000105331.8	1556	11	13575	-127	13575	127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCTCCTTCCTAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	80955355	80959844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
ENSMUSG00000035027.19_80956883_80960013_1	chr10	+	730	4	ISM	ENSMUSG00000035027.19	ENSMUST00000105331.8	1556	11	15102	-296	15102	296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACCAGGGTCCCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	80956882	80960013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80956945_80957736_80957799_80958400_80958447_80959453
ENSMUSG00000035041.9_80920722_80927027_1	chr10	-	900	8	ISM	ENSMUSG00000035041.9	ENST00000602257.5	1288	9	738	12	738	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGGTGGCTTCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	80927027	80920721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80920969_80921483_80921581_80921863_80921949_80922350_80922420_80924343_80924451_80925140_80925273_80925910_80926018_80926971
ENSMUSG00000035041.9_80920790_80927061_1	chr10	-	866	8	ISM	ENSMUSG00000035041.9	ENST00000602257.5	1288	9	704	80	704	-80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGCTAGACAACTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	80927061	80920789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80920969_80921483_80921581_80921863_80921949_80922350_80922420_80924343_80924451_80925140_80925273_80925910_80926018_80926971
ENSMUSG00000035041.9_80920843_80927147_1	chr10	-	899	8	ISM	ENSMUSG00000035041.9	ENST00000602257.5	1288	9	618	133	618	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGCAGACTGGGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	80927147	80920842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80920969_80921483_80921581_80921863_80921949_80922350_80922420_80924343_80924451_80925140_80925273_80925910_80926018_80926971
ENSMUSG00000035041.9_80921484_80927271_1	chr10	-	897	7	ISM	ENSMUSG00000035041.9	ENST00000602257.5	1288	9	494	774	494	-774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCAGTACCAGCCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	80927271	80921483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80921581_80921863_80921949_80922350_80922420_80924343_80924451_80925140_80925273_80925910_80926018_80926971
ENSMUSG00000035041.9_80921862_80927740_1	chr10	-	909	7	ISM	ENSMUSG00000035041.9	ENST00000602257.5	1288	9	25	1152	25	-1152	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCTGCCTGCAGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	80927740	80921861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80921949_80922350_80922420_80924343_80924451_80925140_80925273_80925910_80926018_80926971_80927270_80927631
ENSMUSG00000035045.18_94942726_94974067_1	chrX	+	4791	6	FSM	ENSMUSG00000035045.18	ENST00000338957.4	6906	6	87	2028	87	-2028	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCAGTCAGGGGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	94942725	94974067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_94943307_94965958_94966099_94968050_94968286_94968869_94968977_94970155_94972177_94972360
ENSMUSG00000035045.18_94943009_94974305_1	chrX	+	4746	6	FSM	ENSMUSG00000035045.18	ENST00000338957.4	6906	6	370	1790	370	-1790	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGGCACTGTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	94943008	94974305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_94943307_94965958_94966099_94968050_94968286_94968869_94968977_94970155_94972177_94972360
ENSMUSG00000035045.18_94943173_94974460_1	chrX	+	4737	6	FSM	ENSMUSG00000035045.18	ENST00000338957.4	6906	6	534	1635	534	-1635	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTTTAGCCTATTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	94943172	94974460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_94943307_94965958_94966099_94968050_94968286_94968869_94968977_94970155_94972177_94972360
ENSMUSG00000035045.18_94965996_94974567_1	chrX	+	4673	5	ISM	ENSMUSG00000035045.18	ENST00000338957.4	6906	6	23357	1528	23357	-1528	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCATAAATCCAACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	94965995	94974567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_94966099_94968050_94968286_94968869_94968977_94970155_94972177_94972360
ENSMUSG00000035045.18_94965996_94974642_1	chrX	+	4748	5	ISM	ENSMUSG00000035045.18	ENST00000338957.4	6906	6	23357	1453	23357	-1453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTTGTCTATAATTATA	NA	NA	NA	NA	NA	NA	NA	NA	94965995	94974642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_94966099_94968050_94968286_94968869_94968977_94970155_94972177_94972360
ENSMUSG00000035045.18_94965996_94974685_1	chrX	+	4791	5	ISM	ENSMUSG00000035045.18	ENST00000338957.4	6906	6	23357	1410	23357	-1410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACCTCGGTAGCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	94965995	94974685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_94966099_94968050_94968286_94968869_94968977_94970155_94972177_94972360
ENSMUSG00000035045.18_94968128_94974826_1	chrX	+	4752	4	ISM	ENSMUSG00000035045.18	ENST00000338957.4	6906	6	25489	1269	25489	-1269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATTCCTTCACTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	94968127	94974826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_94968286_94968869_94968977_94970155_94972177_94972360
ENSMUSG00000035045.18_94968184_94974894_1	chrX	+	4764	4	ISM	ENSMUSG00000035045.18	ENST00000338957.4	6906	6	25545	1201	25545	-1201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGATTTTTGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	94968183	94974894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_94968286_94968869_94968977_94970155_94972177_94972360
ENSMUSG00000035045.18_94968903_94975017_1	chrX	+	4752	3	ISM	ENSMUSG00000035045.18	ENST00000338957.4	6906	6	26264	1078	26264	-1078	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAAAGAGGAGCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	94968902	94975017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_94968977_94970155_94972177_94972360
ENSMUSG00000035045.18_94968929_94975118_1	chrX	+	4827	3	ISM	ENSMUSG00000035045.18	ENST00000338957.4	6906	6	26290	977	26290	-977	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTCTAATCAATGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	94968928	94975118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_94968977_94970155_94972177_94972360
ENSMUSG00000035045.18_94970850_94975787_1	chrX	+	4754	2	ISM	ENSMUSG00000035045.18	ENST00000338957.4	6906	6	28211	308	28211	-308	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTATTGTTTAATGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	94970849	94975787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_94972177_94972360
ENSMUSG00000035045.18_94971084_94976011_1	chrX	+	4744	2	ISM	ENSMUSG00000035045.18	ENST00000338957.4	6906	6	28445	84	28445	-84	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACCTATAATTGTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	94971083	94976011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_94972177_94972360
ENSMUSG00000035045.18_94971166_94976086_1	chrX	+	4737	2	ISM	ENSMUSG00000035045.18	ENST00000338957.4	6906	6	28527	9	28527	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACTAATCACTGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	94971165	94976086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_94972177_94972360
ENSMUSG00000035048.14_102506744_102511441_1	chr9	+	388	3	ISM	ENSMUSG00000035048.14	ENSMUST00000038673.14	411	4	2882	0	2866	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCACTTGGTTTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	102506743	102511441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_102506777_102506961_102507088_102511212
ENSMUSG00000035062.14_94683376_94685881_1	chrX	-	994	2	ISM	ENSMUSG00000035062.14	ENSMUST00000119640.8	2075	5	16108	574	16108	-571	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGTGGTATAGGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	94685881	94683375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_94684258_94685769
ENSMUSG00000035062.14_94683493_94686953_1	chrX	-	968	3	ISM	ENSMUSG00000035062.14	ENSMUST00000119640.8	2075	5	15036	691	15036	-688	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTCTCCATACTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	94686953	94683492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_94684258_94685769_94685933_94686913
ENSMUSG00000035062.14_94683552_94687015_1	chrX	-	971	3	ISM	ENSMUSG00000035062.14	ENSMUST00000119640.8	2075	5	14974	750	14974	-747	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATACTGAAGTTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	94687015	94683551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_94684258_94685769_94685933_94686913
ENSMUSG00000035062.14_94683790_94689078_1	chrX	-	970	4	ISM	ENSMUSG00000035062.14	ENSMUST00000044382.7	2219	5	13037	985	12911	-985	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGAGCTCCATGCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	94689078	94683789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_94684258_94685769_94685933_94686913_94687087_94688912
ENSMUSG00000035064.18_120485907_120502806_1	chr7	+	1243	9	ISM	ENSMUSG00000035064.18	ENSMUST00000106488.3	2537	18	35495	-87	35495	87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTTGAAGATGCAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	120485906	120502806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ENSMUSG00000035069.4_103171009_103210848_1	chr4	+	1444	8	ISM	ENSMUSG00000035069.4	ENSMUST00000035780.4	1915	9	0	12792	0	-12792	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCTAACCCCACTAATT	NA	NA	NA	NA	NA	NA	NA	NA	103171008	103210848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698
ENSMUSG00000035069.4_103176414_103223338_1	chr4	+	1346	8	ISM	ENSMUSG00000035069.4	ENSMUST00000035780.4	1915	9	5405	302	5405	-302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACCACTGACGTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	103176413	103223338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
ENSMUSG00000035069.4_103176568_103223515_1	chr4	+	1369	8	ISM	ENSMUSG00000035069.4	ENSMUST00000035780.4	1915	9	5559	125	5559	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCTGGATTTTTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	103176567	103223515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
ENSMUSG00000035069.4_103178834_103223640_1	chr4	+	1339	7	ISM	ENSMUSG00000035069.4	ENSMUST00000035780.4	1915	9	7825	0	7825	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGCCTTAGTTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	103178833	103223640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
ENSMUSG00000035078.7_63760926_63771878_1	chr14	-	1521	6	ISM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	9553	0	9553	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGTGTGTGCCCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	63771878	63760925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775
ENSMUSG00000035078.7_63760926_63771945_1	chr14	-	1588	6	ISM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	9486	0	9486	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGTGTGTGCCCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	63771945	63760925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775
ENSMUSG00000035078.7_63761156_63774580_1	chr14	-	1546	7	ISM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	6851	230	6851	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAAATAATTGGGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	63774580	63761155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440
ENSMUSG00000035078.7_63761378_63779876_1	chr14	-	1564	9	ISM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	1555	452	1555	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTCTAAGCACTGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	63779876	63761377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796
ENSMUSG00000035078.7_63761510_63780979_1	chr14	-	1534	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	452	584	452	-584	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGAAAGATCGCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	63780979	63761509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ENSMUSG00000035078.7_63761634_63781119_1	chr14	-	1550	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	312	708	312	-708	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGGATGAAGCATATGAG	NA	NA	NA	NA	NA	NA	NA	NA	63781119	63761633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ENSMUSG00000035078.7_63765601_63781431_1	chr14	-	1636	8	ISM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	0	4675	0	-4675	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGTTCGGGACATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	63781431	63765600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ENSMUSG00000035078.7_63765660_63781431_1	chr14	-	1577	8	ISM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	0	4734	0	-4734	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTCCTTCGAGTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	63781431	63765659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ENSMUSG00000035086.14_101179088_101181325_1	chr11	-	924	3	ISM	ENSMUSG00000035086.14	ENSMUST00000130916.8	4365	12	11787	2310	11750	156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	101181325	101179087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101179808_101180608_101180752_101181264
ENSMUSG00000035086.14_101179244_101182358_1	chr11	-	918	4	ISM	ENSMUSG00000035086.14	ENSMUST00000130916.8	4365	12	10754	2466	10717	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGTCAGGAGTTGCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	101182358	101179243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208
ENSMUSG00000035086.14_101179454_101184945_1	chr11	-	827	5	ISM	ENSMUSG00000035086.14	ENSMUST00000130916.8	4365	12	8167	2676	8130	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTTGACTCAGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	101184945	101179453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826
ENSMUSG00000035086.14_101180706_101186415_1	chr11	-	796	7	NNC	ENSMUSG00000035086.14	novel	4365	12	NA	NA	6660	-1462	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTTTGACCATGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	101186415	101180705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185791_101185991_101186120_101186258_101186359
ENSMUSG00000035086.14_101181310_101187133_1	chr11	-	786	7	ISM	ENSMUSG00000035086.14	ENSMUST00000130916.8	4365	12	5979	4532	5942	-2066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGAAATCATTCCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	101187133	101181309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187083
ENSMUSG00000035086.14_101182325_101192682_1	chr11	-	860	8	ISM	ENSMUSG00000035086.14	ENSMUST00000130916.8	4365	12	430	5547	393	-3081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGGTCGCTTGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	101192682	101182324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189903_101192553
ENSMUSG00000035086.14_101184826_101193032_1	chr11	-	902	8	ISM	ENSMUSG00000035086.14	ENSMUST00000130916.8	4365	12	80	8048	43	1907	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGGGCAGGGGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	101193032	101184825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189903_101192553_101192683_101192957
ENSMUSG00000035104.15_82068956_82069778_1	chr6	+	782	2	FSM	ENSMUSG00000035104.15	ENST00000393913.8	1267	2	184	301	184	-301	multi-exon	TRUE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTATTATGAGATGTATT	NA	NA	NA	NA	NA	NA	NA	NA	82068955	82069778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_82069360_82069400
ENSMUSG00000035104.15_82069195_82070080_1	chr6	+	845	2	FSM	ENSMUSG00000035104.15	ENST00000393913.8	1267	2	423	-1	423	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTTCGTGTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	82069194	82070080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_82069360_82069400
ENSMUSG00000035105.6_54226640_54228466_1	chr12	-	852	2	ISM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	22180	873	22180	-873	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGCAAAGCCCAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	54228466	54226639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54227442_54228416
ENSMUSG00000035105.6_54226865_54232384_1	chr12	-	846	4	ISM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	18262	1098	18262	-1098	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGTACTTTCTGAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	54232384	54226864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54227442_54228416_54228491_54230665_54230803_54232326
ENSMUSG00000035105.6_54227019_54250137_1	chr12	-	901	5	FSM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	509	1252	509	-1252	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAGAAATATCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	54250137	54227018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_54227442_54228416_54228491_54230665_54230803_54232326_54232447_54249990
ENSMUSG00000035105.6_54227305_54250385_1	chr12	-	863	5	FSM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	261	1538	261	-1538	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCCACCTTGTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	54250385	54227304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_54227442_54228416_54228491_54230665_54230803_54232326_54232447_54249990
ENSMUSG00000035105.6_54230663_54250646_1	chr12	-	916	3	ISM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	0	4896	0	-4896	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGGGGCCACAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	54250646	54230662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54230803_54232326_54232447_54249990
ENSMUSG00000035107.14_58245022_58285776_1	chr16	+	1682	15	ISM	ENSMUSG00000035107.14	ENST00000326857.9	2785	16	15903	809	15903	-809	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTCGATCCTTACAACT	NA	NA	NA	NA	NA	NA	NA	NA	58245021	58285776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283479_58284517_58284691_58285685
ENSMUSG00000035107.14_58269247_58286234_1	chr16	+	1679	11	ISM	ENSMUSG00000035107.14	ENST00000326857.9	2785	16	40128	351	40128	-351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTATCTGTCACTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	58269246	58286234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283479_58284517_58284691_58285685
ENSMUSG00000035107.14_58271116_58286372_1	chr16	+	1681	9	ISM	ENSMUSG00000035107.14	ENST00000326857.9	2785	16	41997	213	41997	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTACTGTAAAACACTATT	NA	NA	NA	NA	NA	NA	NA	NA	58271115	58286372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283479_58284517_58284691_58285685
ENSMUSG00000035107.14_58271179_58286440_1	chr16	+	1686	9	ISM	ENSMUSG00000035107.14	ENST00000326857.9	2785	16	42060	145	42060	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTGAGTATTTATTAC	NA	NA	NA	NA	NA	NA	NA	NA	58271178	58286440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283479_58284517_58284691_58285685
ENSMUSG00000035107.14_58271217_58286526_1	chr16	+	1734	9	ISM	ENSMUSG00000035107.14	ENST00000326857.9	2785	16	42098	59	42098	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTTCTTGAAATACCGAA	NA	NA	NA	NA	NA	NA	NA	NA	58271216	58286526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283479_58284517_58284691_58285685
ENSMUSG00000035126.20_102921641_102939538_1	chr4	-	658	4	ISM	ENSMUSG00000035126.20	ENSMUST00000036451.15	3671	16	31958	26379	31931	0	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTTTTATTTAGTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	102939538	102921640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_102921748_102923456_102923684_102929845_102930041_102939409
ENSMUSG00000035126.20_102921641_102944553_1	chr4	-	682	5	ISM	ENSMUSG00000035126.20	ENSMUST00000036451.15	3671	16	26943	26379	26916	0	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTTTTATTTAGTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	102944553	102921640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_102921748_102923456_102923684_102929845_102930041_102939409_102939539_102944529
ENSMUSG00000035126.20_102923456_102944669_1	chr4	-	692	4	ISM	ENSMUSG00000035126.20	ENSMUST00000036557.15	3479	15	26827	28194	26800	-1815	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCACCAAATGCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	102944669	102923455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_102923684_102929845_102930041_102939409_102939539_102944529
ENSMUSG00000035126.20_102923567_102947611_1	chr4	-	598	5	ISM	ENSMUSG00000035126.20	ENSMUST00000036557.15	3479	15	23885	28305	23858	-1926	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACGGAACAGTCAACAATA	NA	NA	NA	NA	NA	NA	NA	NA	102947611	102923566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_102923684_102929845_102930041_102939409_102939539_102944529_102944670_102947594
ENSMUSG00000035126.20_102923614_102947671_1	chr4	-	611	5	ISM	ENSMUSG00000035126.20	ENSMUST00000036557.15	3479	15	23825	28352	23798	-1973	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAGATGAAGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	102947671	102923613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_102923684_102929845_102930041_102939409_102939539_102944529_102944670_102947594
ENSMUSG00000035126.20_102923670_102947717_1	chr4	-	601	5	ISM	ENSMUSG00000035126.20	ENSMUST00000036557.15	3479	15	23779	28408	23752	-2029	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCTGAAGAAACTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	102947717	102923669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_102923684_102929845_102930041_102939409_102939539_102944529_102944670_102947594
ENSMUSG00000035126.20_102929940_102952595_1	chr4	-	597	5	ISM	ENSMUSG00000035126.20	ENSMUST00000036557.15	3479	15	18901	34678	18874	-8299	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCATCAAGACTTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	102952595	102929939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_102930041_102939409_102939539_102944529_102944670_102947594_102947752_102952525
ENSMUSG00000035126.20_102929986_102953884_1	chr4	-	691	6	ISM	ENSMUSG00000035126.20	ENSMUST00000036557.15	3479	15	17612	34724	17585	-8345	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGGATGAAGAAGACAACT	NA	NA	NA	NA	NA	NA	NA	NA	102953884	102929985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_102930041_102939409_102939539_102944529_102944670_102947594_102947752_102952525_102952639_102953787
ENSMUSG00000035126.20_102939428_102953898_1	chr4	-	632	5	ISM	ENSMUSG00000035126.20	ENST00000371023.7	1602	10	17571	17787	17571	-17787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGACCCAAAAATACAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	102953898	102939427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_102939539_102944529_102944670_102947594_102947752_102952525_102952639_102953787
ENSMUSG00000035126.20_102944528_102960497_1	chr4	-	671	5	ISM	ENSMUSG00000035126.20	ENST00000371023.7	1602	10	10972	22887	10972	-22887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGCTTTATTCTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	102960497	102944527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_102944670_102947594_102947752_102952525_102952639_102953787_102953973_102960423
ENSMUSG00000035126.20_102947595_102960601_1	chr4	-	633	4	ISM	ENSMUSG00000035126.20	ENST00000371023.7	1602	10	10868	25954	10868	-25954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATAGCTCAGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	102960601	102947594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_102947752_102952525_102952639_102953787_102953973_102960423
ENSMUSG00000035126.20_102947699_102971421_1	chr4	-	644	5	ISM	ENSMUSG00000035126.20	ENSMUST00000036557.15	3479	15	75	52437	48	-26058	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGACTATAGAAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	102971421	102947698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_102947752_102952525_102952639_102953787_102953973_102960423_102960602_102971306
ENSMUSG00000035131.15_146370702_146777251_1	chr1	+	2861	8	FSM	ENSMUSG00000035131.15	ENSMUST00000074622.11	4023	8	204	958	204	-958	multi-exon	TRUE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGCTGGCTGTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	146370701	146777251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_146371816_146390405_146390692_146558313_146558505_146577393_146577585_146622217_146622324_146627492_146627730_146707298_146707522_146776738
ENSMUSG00000035131.15_146370979_146777532_1	chr1	+	2857	8	NNC	ENSMUSG00000035131.15	novel	4023	8	NA	NA	481	-677	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATGAAAATCAACAACATC	NA	NA	NA	NA	NA	NA	NA	NA	146370978	146777532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_146371816_146390413_146390692_146558313_146558505_146577393_146577585_146622217_146622324_146627492_146627730_146707298_146707522_146776738
ENSMUSG00000035131.15_146371672_146778210_1	chr1	+	2850	8	FSM	ENSMUSG00000035131.15	ENSMUST00000074622.11	4023	8	1174	-1	1174	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTGTGGGATTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	146371671	146778210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_146371816_146390405_146390692_146558313_146558505_146577393_146577585_146622217_146622324_146627492_146627730_146707298_146707522_146776738
ENSMUSG00000035133.10_52565861_52589336_1	chr12	+	955	2	ISM	ENSMUSG00000035133.10	ENSMUST00000110725.2	5197	6	3001	25299	3001	-24847	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCCCTCCAGGATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	52565860	52589336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_52566751_52589271
ENSMUSG00000035133.10_52566096_52606831_1	chr12	+	962	4	ISM	ENSMUSG00000035133.10	ENSMUST00000110725.2	5197	6	3236	7804	3236	-7352	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATCCTTTGATTCCATAT	NA	NA	NA	NA	NA	NA	NA	NA	52566095	52606831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_52566751_52589271_52589420_52604271_52604350_52606750
ENSMUSG00000035133.10_52566216_52609179_1	chr12	+	968	5	ISM	ENSMUSG00000035133.10	ENSMUST00000110725.2	5197	6	3356	5456	3356	-5004	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAGATATGTGATAACA	NA	NA	NA	NA	NA	NA	NA	NA	52566215	52609179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104
ENSMUSG00000035133.10_52566391_52613923_1	chr12	+	954	6	FSM	ENSMUSG00000035133.10	ENSMUST00000110725.2	5197	6	3531	712	3531	-260	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAAACATTTATTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	52566390	52613923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ENSMUSG00000035133.10_52566558_52614119_1	chr12	+	983	6	FSM	ENSMUSG00000035133.10	ENSMUST00000110725.2	5197	6	3698	516	3698	-64	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGAATGTGATTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	52566557	52614119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ENSMUSG00000035133.10_52566628_52614166_1	chr12	+	960	6	FSM	ENSMUSG00000035133.10	ENSMUST00000110725.2	5197	6	3768	469	3768	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACATGCATGTTTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	52566627	52614166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ENSMUSG00000035139.15_51827925_51833944_1	chr13	+	780	5	ISM	ENSMUSG00000035139.15	ENSMUST00000040117.15	3328	17	22192	4136	22148	-4136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATCATCATCTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	51827924	51833944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768
ENSMUSG00000035139.15_51836125_51837779_1	chr13	+	722	3	ISM	ENSMUSG00000035139.15	ENSMUST00000040117.15	3328	17	30392	301	30348	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGGGCCCTTCCTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	51836124	51837779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_51836191_51836479_51836670_51837313
ENSMUSG00000035150.16_93233900_93239936_1	chrX	-	688	2	ISM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	16379	1587	16321	-1587	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAATTCTCCCTACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	93239936	93233899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93234529_93239877
ENSMUSG00000035150.16_93233956_93239996_1	chrX	-	692	2	ISM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	16319	1643	16261	-1643	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCTGGTCAGCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	93239996	93233955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93234529_93239877
ENSMUSG00000035150.16_93234183_93243343_1	chrX	-	713	4	ISM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	12972	1870	12914	-1870	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAACAAAGCCTAGAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	93243343	93234182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319
ENSMUSG00000035150.16_93234260_93243403_1	chrX	-	696	4	ISM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	12912	1947	12854	-1947	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGCCCAATCCCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	93243403	93234259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319
ENSMUSG00000035150.16_93234369_93244539_1	chrX	-	692	5	ISM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	11776	2056	11718	-2056	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCTCATTACCTTACTAG	NA	NA	NA	NA	NA	NA	NA	NA	93244539	93234368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495
ENSMUSG00000035150.16_93239919_93247579_1	chrX	-	701	6	ISM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	8736	7606	8678	3328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAATTGCCCTTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	93247579	93239918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555
ENSMUSG00000035150.16_93239983_93247652_1	chrX	-	710	6	ISM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	8663	7670	8605	3264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGCAGTCAAGGCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	93247652	93239982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555
ENSMUSG00000035150.16_93240959_93248719_1	chrX	-	704	6	ISM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	7596	8646	7538	2288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTATTTCCTGCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	93248719	93240958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654
ENSMUSG00000035150.16_93243448_93253203_1	chrX	-	685	7	ISM	ENSMUSG00000035150.16	ENSMUST00000113922.2	1103	9	3054	201	3054	-201	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGACCCGGTATTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	93253203	93243447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141
ENSMUSG00000035150.16_93246486_93256257_1	chrX	-	724	7	ISM	ENSMUSG00000035150.16	ENSMUST00000113922.2	1103	9	0	3239	0	-3239	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGTATATAGTGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	93256257	93246485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ENSMUSG00000035152.15_83215427_83258823_1	chr11	+	1882	12	ISM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	21827	35015	16363	-29910	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTTTGCCATCCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	83215426	83258823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708
ENSMUSG00000035152.15_83223855_83280575_1	chr11	+	1891	13	ISM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	30255	13263	-13625	-8158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTCAATGTGCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	83223854	83280575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528
ENSMUSG00000035152.15_83227206_83293510_1	chr11	+	1878	14	ISM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	33606	328	-10274	40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTAACTGGAAGACGTT	NA	NA	NA	NA	NA	NA	NA	NA	83227205	83293510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ENSMUSG00000035152.15_83237676_83281554_1	chr11	+	775	7	NIC	ENSMUSG00000035152.15	novel	1181	8	NA	NA	196	-7179	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAATGAAAATGAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	83237675	83281554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260496_83260609_83280528_83280614_83281520
ENSMUSG00000035152.15_83241922_83288733_1	chr11	+	806	7	NIC	ENSMUSG00000035152.15	novel	1181	8	NA	NA	4442	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTAAGGCCTTTCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	83241921	83288733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_83241998_83256472_83256620_83258708_83258855_83260496_83260609_83280528_83280614_83281520_83281608_83288580
ENSMUSG00000035152.15_83256472_83288733_1	chr11	+	735	6	ISM	ENSMUSG00000035152.15	ENST00000441083.1	1181	8	18992	0	18992	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTAAGGCCTTTCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	83256471	83288733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83256624_83258708_83258855_83260496_83260609_83280528_83280614_83281520_83281608_83288580
ENSMUSG00000035164.9_52026556_52037910_1	chr9	-	1937	4	ISM	ENSMUSG00000035164.9	ENST00000528673.5	2921	6	22753	45	22753	-45	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCCCACTTGGTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	52037910	52026555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_52028103_52028838_52028946_52031456_52031692_52037862
ENSMUSG00000035164.9_52026627_52037942_1	chr9	-	1898	4	ISM	ENSMUSG00000035164.9	ENST00000528673.5	2921	6	22721	116	22721	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATCTCCTTCTCGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	52037942	52026626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_52028103_52028838_52028946_52031456_52031692_52037862
ENSMUSG00000035164.9_52026678_52037992_1	chr9	-	1897	4	ISM	ENSMUSG00000035164.9	ENST00000528673.5	2921	6	22671	167	22671	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTTTTGTTCAGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	52037992	52026677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_52028103_52028838_52028946_52031456_52031692_52037862
ENSMUSG00000035164.9_52027202_52055490_1	chr9	-	1899	5	ISM	ENSMUSG00000035164.9	ENST00000528673.5	2921	6	5173	691	5173	-691	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTCCTGGCGATTACC	NA	NA	NA	NA	NA	NA	NA	NA	52055490	52027201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_52028103_52028838_52028946_52031456_52031692_52037862_52038003_52054974
ENSMUSG00000035164.9_52027409_52055690_1	chr9	-	1887	5	NNC	ENSMUSG00000035164.9	novel	6764	6	NA	NA	4973	-898	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCTGACCCACAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	52055690	52027408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_52028098_52028838_52028946_52031456_52031692_52037862_52038003_52054974
ENSMUSG00000035164.9_52027504_52060612_1	chr9	-	1877	6	FSM	ENSMUSG00000035164.9	ENST00000528673.5	2921	6	51	993	51	-993	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTCTGTGGCTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	52060612	52027503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_52028103_52028838_52028946_52031456_52031692_52037862_52038003_52054974_52055727_52060568
ENSMUSG00000035171.10_21574676_21630118_1	chr19	-	1392	4	FSM	ENSMUSG00000035171.10	ENSMUST00000038830.10	1614	4	222	0	-26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTCTTGTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	21630118	21574675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_21575699_21576118_21576233_21596472_21596580_21629970
ENSMUSG00000035171.10_21574856_21630182_1	chr19	-	1276	4	FSM	ENSMUSG00000035171.10	ENSMUST00000038830.10	1614	4	158	180	-90	-180	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCAGGTGATATGATG	NA	NA	NA	NA	NA	NA	NA	NA	21630182	21574855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_21575699_21576118_21576233_21596472_21596580_21629970
ENSMUSG00000035171.10_21574856_21630340_1	chr19	-	1434	4	FSM	ENSMUSG00000035171.10	ENSMUST00000038830.10	1614	4	0	180	0	-180	multi-exon	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCAGGTGATATGATG	NA	NA	NA	NA	NA	NA	NA	NA	21630340	21574855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_21575699_21576118_21576233_21596472_21596580_21629970
ENSMUSG00000035173.15_56801442_56810622_1	chr19	-	972	2	FSM	ENSMUSG00000035173.15	ENST00000369285.7	962	2	-10	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCACTGTTAAACAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	56810622	56801441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_56802211_56810419
ENSMUSG00000035173.15_56801442_56810622_2	chr19	-	971	2	NNC	ENSMUSG00000035173.15	novel	962	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCACTGTTAAACAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	56810622	56801441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_56802206_56810415
ENSMUSG00000035179.5_10452295_10459721_1	chr19	-	1169	10	NNC	ENSMUSG00000035179.5	novel	1180	10	NA	NA	10	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCATGCCCCCTTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	10459721	10452294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_10452466_10454391_10454487_10454568_10454683_10454888_10454976_10455560_10455674_10455988_10456053_10456833_10456958_10458643_10458802_10459066_10459185_10459596
ENSMUSG00000035179.5_10452295_10459721_2	chr19	-	1165	10	NNC	ENSMUSG00000035179.5	novel	1180	10	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCATGCCCCCTTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	10459721	10452294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_10452466_10454391_10454487_10454568_10454683_10454888_10454971_10455560_10455674_10455988_10456053_10456833_10456963_10458647_10458802_10459066_10459185_10459596
ENSMUSG00000035179.5_10452295_10459721_3	chr19	-	1170	10	FSM	ENSMUSG00000035179.5	ENST00000432063.6	1180	10	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCATGCCCCCTTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	10459721	10452294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_10452466_10454391_10454487_10454568_10454683_10454888_10454976_10455560_10455674_10455988_10456053_10456833_10456963_10458647_10458802_10459066_10459185_10459596
ENSMUSG00000035179.5_10452295_10459721_4	chr19	-	1168	10	NNC	ENSMUSG00000035179.5	novel	1180	10	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	756	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCATGCCCCCTTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	10459721	10452294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_10452466_10454391_10454487_10454568_10454683_10454888_10454976_10455560_10455674_10455988_10456053_10456835_10456963_10458647_10458802_10459066_10459185_10459596
ENSMUSG00000035184.16_62801946_62844619_1	chr14	+	1853	4	FSM	ENSMUSG00000035184.16	ENST00000322475.13	1943	4	10	80	10	-80	multi-exon	TRUE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATAGCCAGAGCTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	62801945	62844619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_62801969_62824601_62825336_62843321_62844291_62844492
ENSMUSG00000035184.16_62824602_62844700_1	chr14	+	1911	3	ISM	ENSMUSG00000035184.16	ENST00000322475.13	1943	4	22666	-1	22666	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGGGACTGGCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	62824601	62844700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_62825336_62843321_62844291_62844492
ENSMUSG00000035184.16_62824602_62844700_2	chr14	+	1905	3	NNC	ENSMUSG00000035184.16	novel	1943	4	NA	NA	22666	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGGGACTGGCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	62824601	62844700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_62825336_62843327_62844291_62844492
ENSMUSG00000035184.16_62824602_62844700_3	chr14	+	1914	3	NNC	ENSMUSG00000035184.16	novel	1943	4	NA	NA	22666	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGGGACTGGCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	62824601	62844700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_62825336_62843321_62844291_62844489
ENSMUSG00000035184.16_62824722_62844700_1	chr14	+	1788	3	NNC	ENSMUSG00000035184.16	novel	1943	4	NA	NA	22786	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGGGACTGGCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	62824721	62844700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_62825336_62843321_62844291_62844495
ENSMUSG00000035189.18_88785228_88814680_1	chr10	-	1280	7	ISM	ENSMUSG00000035189.18	ENST00000392979.7	3888	27	278804	376	278318	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTCTACATCACCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	88814680	88785227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88785638_88788047_88788248_88790526_88790633_88796443_88796564_88807129_88807278_88808600_88808754_88814537
ENSMUSG00000035189.18_88785228_88816905_1	chr10	-	1380	8	ISM	ENSMUSG00000035189.18	ENST00000392979.7	3888	27	276579	376	276093	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTCTACATCACCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	88816905	88785227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88785638_88788047_88788248_88790526_88790633_88796443_88796564_88807129_88807278_88808600_88808754_88814537_88814681_88816805
ENSMUSG00000035189.18_88785391_88817066_1	chr10	-	1261	9	ISM	ENSMUSG00000035189.18	ENST00000392979.7	3888	27	276418	539	275932	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGTTACATTCTCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	88817066	88785390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88785638_88788047_88788248_88790526_88790633_88796443_88796564_88807129_88807278_88808600_88808754_88814537_88814681_88816805_88816904_88817020
ENSMUSG00000035189.18_88785601_88828799_1	chr10	-	1275	12	ISM	ENSMUSG00000035189.18	ENST00000392979.7	3888	27	264685	749	264199	-373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGCAGTGCAAAAAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	88828799	88785600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88785638_88788047_88788248_88790526_88790633_88796443_88796564_88807129_88807278_88808600_88808754_88814537_88814681_88816805_88816904_88817020_88817079_88818038_88818151_88819616_88819654_88828736
ENSMUSG00000035189.18_88788044_88828901_1	chr10	-	1344	11	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	264261	3180	264097	-2816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTGCCCAAGGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	88828901	88788043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88788248_88790526_88790633_88796443_88796564_88807129_88807278_88808600_88808754_88814537_88814681_88816805_88816904_88817020_88817079_88818038_88818151_88819616_88819654_88828736
ENSMUSG00000035189.18_88788177_88831156_1	chr10	-	1282	12	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	262006	3313	261842	-2949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAGGAGAGAGAAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	88831156	88788176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88788248_88790526_88790633_88796443_88796564_88807129_88807278_88808600_88808754_88814537_88814681_88816805_88816904_88817020_88817079_88818038_88818151_88819616_88819654_88828736_88828902_88831085
ENSMUSG00000035189.18_88790527_88834022_1	chr10	-	1364	12	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	259140	5663	258976	-5299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTTTCTCAAACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	88834022	88790526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88790633_88796443_88796564_88807129_88807278_88808600_88808754_88814537_88814681_88816805_88816904_88817020_88817079_88818038_88818151_88819616_88819654_88828736_88828902_88831085_88831227_88833939
ENSMUSG00000035189.18_88796544_88859773_1	chr10	-	1255	13	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	233389	11680	233225	-11316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCAGCTTGTCTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	88859773	88796543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88796564_88807129_88807278_88808600_88808754_88814537_88814681_88816805_88816904_88817020_88817079_88818038_88818151_88819616_88819654_88828736_88828902_88831085_88831227_88833939_88834023_88851936_88851998_88859737
ENSMUSG00000035189.18_88807157_88860916_1	chr10	-	1358	13	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	232246	22293	232082	-21929	internal_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGCCAAGGAGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	88860916	88807156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88807278_88808600_88808754_88814537_88814681_88816805_88816904_88817020_88817079_88818038_88818151_88819616_88819654_88828736_88828902_88831085_88831227_88833939_88834023_88851936_88851998_88859737_88859835_88860827
ENSMUSG00000035189.18_88807227_88860916_1	chr10	-	1288	13	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	232246	22363	232082	-21999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCATTTGTCATAGCAATA	NA	NA	NA	NA	NA	NA	NA	NA	88860916	88807226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88807278_88808600_88808754_88814537_88814681_88816805_88816904_88817020_88817079_88818038_88818151_88819616_88819654_88828736_88828902_88831085_88831227_88833939_88834023_88851936_88851998_88859737_88859835_88860827
ENSMUSG00000035189.18_88808615_88863084_1	chr10	-	1297	13	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	230078	23751	229914	-23387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAAGACATAGGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	88863084	88808614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88808754_88814537_88814681_88816805_88816904_88817020_88817079_88818038_88818151_88819616_88819654_88828736_88828902_88831085_88831227_88833939_88834023_88851936_88851998_88859737_88859835_88860827_88860963_88863056
ENSMUSG00000035189.18_88808680_88863122_1	chr10	-	1270	13	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	230040	23816	229876	-23452	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTGAAATCCGACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	88863122	88808679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88808754_88814537_88814681_88816805_88816904_88817020_88817079_88818038_88818151_88819616_88819654_88828736_88828902_88831085_88831227_88833939_88834023_88851936_88851998_88859737_88859835_88860827_88860963_88863056
ENSMUSG00000035189.18_88808729_88863178_1	chr10	-	1277	13	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	229984	23865	229820	-23501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGCAGCTTTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	88863178	88808728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88808754_88814537_88814681_88816805_88816904_88817020_88817079_88818038_88818151_88819616_88819654_88828736_88828902_88831085_88831227_88833939_88834023_88851936_88851998_88859737_88859835_88860827_88860963_88863056
ENSMUSG00000035189.18_88814595_88870994_1	chr10	-	1309	14	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	222168	29731	222004	-29367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACAATCTTCAGCCGATG	NA	NA	NA	NA	NA	NA	NA	NA	88870994	88814594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88814681_88816805_88816904_88817020_88817079_88818038_88818151_88819616_88819654_88828736_88828902_88831085_88831227_88833939_88834023_88851936_88851998_88859737_88859835_88860827_88860963_88863056_88863179_88865120_88865177_88870936
ENSMUSG00000035189.18_88816859_88904024_1	chr10	-	1282	14	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	189138	31995	188974	-31631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATAATGGTGCTAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	88904024	88816858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88816904_88817020_88817079_88818038_88818151_88819616_88819654_88828736_88828902_88831085_88831227_88833939_88834023_88851936_88851998_88859737_88859835_88860827_88860963_88863056_88863179_88865120_88865177_88870936_88871044_88903961
ENSMUSG00000035189.18_88818118_88924102_1	chr10	-	1262	14	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	169060	33254	168896	-32890	internal_fragment	TRUE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTACCTTGAAAATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	88924102	88818117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88818151_88819616_88819654_88828736_88828902_88831085_88831227_88833939_88834023_88851936_88851998_88859737_88859835_88860827_88860963_88863056_88863179_88865120_88865177_88870936_88871044_88903961_88904094_88920408_88920454_88924054
ENSMUSG00000035189.18_88828749_88948678_1	chr10	-	1259	13	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	144484	43885	144320	-43521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGAATGTGGTAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	88948678	88828748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88828902_88831085_88831227_88833939_88834023_88851936_88851998_88859737_88859835_88860827_88860963_88863056_88863179_88865120_88865177_88870936_88871044_88903961_88904094_88920408_88920454_88924054_88924156_88948652
ENSMUSG00000035189.18_88828749_88948732_1	chr10	-	1313	13	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	144430	43885	144266	-43521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGAATGTGGTAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	88948732	88828748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88828902_88831085_88831227_88833939_88834023_88851936_88851998_88859737_88859835_88860827_88860963_88863056_88863179_88865120_88865177_88870936_88871044_88903961_88904094_88920408_88920454_88924054_88924156_88948652
ENSMUSG00000035189.18_88828749_88948796_1	chr10	-	1377	13	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	144366	43885	144202	-43521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGAATGTGGTAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	88948796	88828748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88828902_88831085_88831227_88833939_88834023_88851936_88851998_88859737_88859835_88860827_88860963_88863056_88863179_88865120_88865177_88870936_88871044_88903961_88904094_88920408_88920454_88924054_88924156_88948652
ENSMUSG00000035189.18_88831086_88952808_1	chr10	-	1320	13	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	140354	46222	140190	-45858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGAAACTTTTCTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	88952808	88831085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88831227_88833939_88834023_88851936_88851998_88859737_88859835_88860827_88860963_88863056_88863179_88865120_88865177_88870936_88871044_88903961_88904094_88920408_88920454_88924054_88924156_88948652_88948812_88952727
ENSMUSG00000035189.18_88833939_88961086_1	chr10	-	1341	13	ISM	ENSMUSG00000035189.18	ENSMUST00000182341.8	3959	28	132366	49082	131912	-48711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCAGTCACTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	88961086	88833938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88834023_88851936_88851998_88859737_88859835_88860827_88860963_88863056_88863179_88865120_88865177_88870936_88871044_88903961_88904094_88920408_88920454_88924054_88924156_88948652_88948812_88952727_88952865_88960981
ENSMUSG00000035189.18_88851961_88985142_1	chr10	-	1264	13	ISM	ENSMUSG00000035189.18	ENSMUST00000182341.8	3959	28	108310	67104	107856	51633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTGTTCATGGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	88985142	88851960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88851998_88859737_88859835_88860827_88860963_88863056_88863179_88865120_88865177_88870936_88871044_88903961_88904094_88920408_88920454_88924054_88924156_88948652_88948812_88952727_88952865_88960981_88961087_88985111
ENSMUSG00000035189.18_88860906_89153000_1	chr10	-	1264	12	ISM	ENSMUSG00000035189.18	ENST00000644049.1	3763	29	10196	75678	10196	42688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTCTTCCCCGCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	89153000	88860905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88860963_88863056_88863179_88865120_88865177_88870936_88871044_88903961_88904094_88920408_88920454_88924054_88924156_88948652_88948812_88952727_88952865_88960981_88961087_88985111_88985307_89152952
ENSMUSG00000035189.18_88860944_89153093_1	chr10	-	1319	12	ISM	ENSMUSG00000035189.18	ENST00000644049.1	3763	29	10103	75716	10103	42650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGACTGTATTTCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	89153093	88860943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88860963_88863056_88863179_88865120_88865177_88870936_88871044_88903961_88904094_88920408_88920454_88924054_88924156_88948652_88948812_88952727_88952865_88960981_88961087_88985111_88985307_89152952
ENSMUSG00000035189.18_88863112_89153104_1	chr10	-	1256	11	ISM	ENSMUSG00000035189.18	ENST00000644049.1	3763	29	10092	77884	10092	40482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGGGCCTCCTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	89153104	88863111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88863179_88865120_88865177_88870936_88871044_88903961_88904094_88920408_88920454_88924054_88924156_88948652_88948812_88952727_88952865_88960981_88961087_88985111_88985307_89152952
ENSMUSG00000035189.18_88870953_89163159_1	chr10	-	1265	10	ISM	ENSMUSG00000035189.18	ENST00000644049.1	3763	29	37	85725	37	32641	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAATAAAATCGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	89163159	88870952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88871044_88903961_88904094_88920408_88920454_88924054_88924156_88948652_88948812_88952727_88952865_88960981_88961087_88985111_88985307_89152952_89153205_89163111
ENSMUSG00000035189.18_88952799_89093416_1	chr10	-	489	4	ISM	ENSMUSG00000035189.18	ENSMUST00000182341.8	3959	28	36	167942	36	-49205	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTGCTTCACCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	89093416	88952798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88952865_88960981_88961087_88985111_88985307_89093293
ENSMUSG00000035198.10_101010764_101017245_1	chr11	+	1793	11	NNC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCCCCGGTCTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	101010763	101017245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016037_101016191_101016857
ENSMUSG00000035198.10_101010764_101017245_2	chr11	+	1794	11	NNC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCCCCGGTCTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	101010763	101017245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013560_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
ENSMUSG00000035199.7_97187650_97209824_1	chr6	+	990	3	FSM	ENSMUSG00000035199.7	ENSMUST00000044681.7	1442	3	0	452	0	-452	multi-exon	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCCCTGTAGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	97187649	97209824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_97187958_97206497_97206716_97209360
ENSMUSG00000035199.7_97206530_97210124_1	chr6	+	947	2	NNC	ENSMUSG00000035199.7	novel	1442	3	NA	NA	18880	-152	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGGGTTAGTAATATG	NA	NA	NA	NA	NA	NA	NA	NA	97206529	97210124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_97206716_97209363
ENSMUSG00000035199.7_97206535_97210138_1	chr6	+	959	2	ISM	ENSMUSG00000035199.7	ENSMUST00000044681.7	1442	3	18885	138	18885	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTTTCACCAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	97206534	97210138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_97206716_97209360
ENSMUSG00000035199.7_97206584_97210276_1	chr6	+	1045	2	NNC	ENSMUSG00000035199.7	novel	1442	3	NA	NA	18934	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTCTATATGGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	97206583	97210276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_97206716_97209363
ENSMUSG00000035199.7_97206642_97210276_1	chr6	+	987	2	NNC	ENSMUSG00000035199.7	novel	1442	3	NA	NA	18992	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTCTATATGGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	97206641	97210276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_97206716_97209363
ENSMUSG00000035203.17_5083239_5100647_1	chr7	+	1929	11	FSM	ENSMUSG00000035203.17	ENST00000270460.11	2474	11	-10	555	5	-218	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTCAGTCCTGTGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	5083238	5100647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_5083477_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
ENSMUSG00000035203.17_5086664_5100807_1	chr7	+	1846	10	ISM	ENSMUSG00000035203.17	ENSMUST00000045277.7	2334	11	3372	368	-83	-58	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTCCCCAATTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	5086663	5100807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
ENSMUSG00000035203.17_5086754_5100865_1	chr7	+	1814	10	ISM	ENSMUSG00000035203.17	ENSMUST00000045277.7	2334	11	3462	310	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCCCTCCCCCACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	5086753	5100865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
ENSMUSG00000035203.17_5086754_5100937_1	chr7	+	1886	10	ISM	ENSMUSG00000035203.17	ENSMUST00000045277.7	2334	11	3462	238	0	72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCACCTCCCCTTGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	5086753	5100937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
ENSMUSG00000035203.17_5086879_5101021_1	chr7	+	1845	10	ISM	ENSMUSG00000035203.17	ENSMUST00000045277.7	2334	11	3587	154	125	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGGGACAGCTGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	5086878	5101021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
ENSMUSG00000035203.17_5086905_5101069_1	chr7	+	1862	10	NNC	ENSMUSG00000035203.17	novel	2334	11	NA	NA	151	-106	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGACAACCCCCAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	5086904	5101069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100157_5100411_5100570
ENSMUSG00000035203.17_5092837_5101202_1	chr7	+	2004	9	ISM	ENSMUSG00000035203.17	ENSMUST00000045277.7	2334	11	9545	-27	6083	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTTCAGATGTCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	5092836	5101202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
ENSMUSG00000035206.11_80691109_80704299_1	chr10	+	2626	15	FSM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	0	243	0	-239	multi-exon	FALSE	canonical	NA	NA	NA	NA	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGAGCTCTGGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	80691108	80704299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702495_80703233
ENSMUSG00000035206.11_80691166_80704345_1	chr10	+	2615	15	FSM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	57	197	57	-193	multi-exon	FALSE	canonical	NA	NA	NA	NA	1686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTAACCAGAATGGATAG	NA	NA	NA	NA	NA	NA	NA	NA	80691165	80704345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702495_80703233
ENSMUSG00000035206.11_80697184_80700001_1	chr10	+	891	7	NNC	ENSMUSG00000035206.11	novel	904	7	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGGCTCTTCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	80697183	80700001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80697300_80698013_80698197_80698532_80698623_80698788_80698921_80699010_80699154_80699288_80699386_80699871
ENSMUSG00000035206.11_80697184_80702515_1	chr10	+	1457	13	NNC	ENSMUSG00000035206.11	novel	2869	15	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGGCGATAGCCCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	80697183	80702515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699380_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333
ENSMUSG00000035206.11_80697184_80702515_2	chr10	+	1456	13	NNC	ENSMUSG00000035206.11	novel	2869	15	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGGCGATAGCCCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	80697183	80702515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701535_80701885_80701964_80702333
ENSMUSG00000035206.11_80697184_80702515_3	chr10	+	1463	13	ISM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	6075	2027	6	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGGCGATAGCCCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	80697183	80702515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333
ENSMUSG00000035206.11_80697266_80704542_1	chr10	+	2669	14	ISM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	6157	0	88	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTCCTGTCCTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	80697265	80704542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702495_80703233
ENSMUSG00000035212.15_101504915_101515743_1	chr4	+	1080	4	FSM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	0	818	0	-818	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTAACATGTTCAATA	NA	NA	NA	NA	NA	NA	NA	NA	101504914	101515743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_101505023_101509595_101509672_101513305_101513493_101515034
ENSMUSG00000035212.15_101509628_101516281_1	chr4	+	1409	3	ISM	ENSMUSG00000035212.15	ENSMUST00000106927.2	1754	4	4638	280	4638	-280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTCTCCCTTGAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	101509627	101516281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_101509672_101513374_101513493_101515034
ENSMUSG00000035227.8_99486776_99493976_1	chr7	-	2385	2	ISM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	14208	0	14130	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCTTTTCCTTTCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	99493976	99486775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99489091_99493906
ENSMUSG00000035227.8_99486964_99497666_1	chr7	-	2423	3	ISM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	10518	188	10440	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGCCGTGGTTACCGCA	NA	NA	NA	NA	NA	NA	NA	NA	99497666	99486963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99489091_99493906_99494042_99497505
ENSMUSG00000035227.8_99486964_99497668_1	chr7	-	2421	3	NNC	ENSMUSG00000035227.8	novel	736	4	NA	NA	10438	-188	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGCCGTGGTTACCGCA	NA	NA	NA	NA	NA	NA	NA	NA	99497668	99486963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_99489091_99493906_99494046_99497513
ENSMUSG00000035227.8_99486964_99498266_1	chr7	-	2507	4	ISM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	9918	188	9840	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGCCGTGGTTACCGCA	NA	NA	NA	NA	NA	NA	NA	NA	99498266	99486963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182
ENSMUSG00000035227.8_99487027_99498254_1	chr7	-	2438	4	NNC	ENSMUSG00000035227.8	novel	2909	5	NA	NA	9852	-251	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAGATAATGACACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	99498254	99487026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_99489091_99493906_99494042_99497505_99497667_99498176
ENSMUSG00000035227.8_99487110_99508066_1	chr7	-	2460	5	NNC	ENSMUSG00000035227.8	novel	2909	5	NA	NA	40	-334	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTGCGTGGGCACACA	NA	NA	NA	NA	NA	NA	NA	NA	99508066	99487109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_99489091_99493906_99494053_99497513_99497667_99498182_99498267_99507970
ENSMUSG00000035227.8_99487118_99508066_1	chr7	-	2449	5	NNC	ENSMUSG00000035227.8	novel	2909	5	NA	NA	40	-342	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGACCTCTGTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	99508066	99487117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_99489091_99493906_99494042_99497505_99497658_99498173_99498267_99507970
ENSMUSG00000035227.8_99487122_99508066_1	chr7	-	2445	5	FSM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	118	346	40	-346	multi-exon	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCCTCTGACCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	99508066	99487121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99507970
ENSMUSG00000035227.8_99487162_99508120_1	chr7	-	2455	5	NNC	ENSMUSG00000035227.8	novel	2909	5	NA	NA	-2	-386	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCGCTGGCCTCCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	99508120	99487161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_99489091_99493906_99494046_99497513_99497667_99498182_99498267_99507970
ENSMUSG00000035227.8_99487167_99508067_1	chr7	-	2401	5	FSM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	117	391	39	-391	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCAGCCGCTGGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	99508067	99487166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99507970
ENSMUSG00000035227.8_99487174_99508066_1	chr7	-	2393	5	NNC	ENSMUSG00000035227.8	novel	2909	5	NA	NA	40	-398	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTACTGTCAGCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	99508066	99487173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_99489091_99493906_99494042_99497505_99497658_99498173_99498267_99507970
ENSMUSG00000035227.8_99487175_99508083_1	chr7	-	2403	5	NNC	ENSMUSG00000035227.8	novel	2909	5	NA	NA	23	-399	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGTACTGTCAGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	99508083	99487174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_99489091_99493906_99494042_99497505_99497652_99498173_99498267_99507970
ENSMUSG00000035227.8_99487231_99508133_1	chr7	-	2403	5	FSM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	51	455	-15	-455	multi-exon	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTCTGGTGCAGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	99508133	99487230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99507970
ENSMUSG00000035234.19_100953188_100957717_1	chr5	-	1461	4	ISM	ENSMUSG00000035234.19	ENSMUST00000055245.13	2139	9	11114	130	11089	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGAGTTGGATTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	100957717	100953187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621
ENSMUSG00000035234.19_100953315_100959948_1	chr5	-	1432	5	ISM	ENSMUSG00000035234.19	ENSMUST00000055245.13	2139	9	8883	257	8858	-246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTTCAAGTTGGGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	100959948	100953314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874
ENSMUSG00000035234.19_100953374_100960025_1	chr5	-	1450	5	ISM	ENSMUSG00000035234.19	ENSMUST00000117364.8	1657	10	8781	305	8781	-305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACCCCCAAATTGTCGA	NA	NA	NA	NA	NA	NA	NA	NA	100960025	100953373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874
ENSMUSG00000035234.19_100953489_100963151_1	chr5	-	1502	6	ISM	ENSMUSG00000035234.19	ENSMUST00000117364.8	1657	10	5655	420	5655	-420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGGGTGTTCTAAATC	NA	NA	NA	NA	NA	NA	NA	NA	100963151	100953488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027
ENSMUSG00000035234.19_100953630_100968809_1	chr5	-	1545	9	FSM	ENSMUSG00000035234.19	ENSMUST00000055245.13	2139	9	22	572	-3	-561	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAACTTCTCTACCACTG	NA	NA	NA	NA	NA	NA	NA	NA	100968809	100953629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ENSMUSG00000035235.14_61837241_61843175_1	chr14	+	1301	2	ISM	ENSMUSG00000035235.14	ENSMUST00000039562.8	1550	3	252	220	252	-220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAGTTTATATGCAAATA	NA	NA	NA	NA	NA	NA	NA	NA	61837240	61843175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_61837345_61841978
ENSMUSG00000035238.5_163695853_163700394_1	chr2	+	449	2	FSM	ENSMUSG00000035238.5	ENSMUST00000044798.4	1199	2	282	468	130	-468	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCATCACTCTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	163695852	163700394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_163696010_163700102
ENSMUSG00000035242.16_80662527_80664791_1	chr10	+	705	5	FSM	ENSMUSG00000035242.16	ENST00000602676.6	953	5	12	236	0	-48	multi-exon	FALSE	canonical	NA	NA	NA	NA	3192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTCTACACTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	80662526	80664791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUSG00000035242.16_80662527_80665010_1	chr10	+	924	5	FSM	ENSMUSG00000035242.16	ENST00000602676.6	953	5	12	17	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGTTTAAGATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	80662526	80665010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUSG00000035242.16_80662527_80665010_2	chr10	+	918	5	FSM	ENSMUSG00000035242.16	ENST00000582888.8	916	5	-2	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGTTTAAGATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	80662526	80665010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80662740_80664076_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUSG00000035242.16_80662527_80665124_1	chr10	+	1038	5	FSM	ENSMUSG00000035242.16	ENST00000602676.6	953	5	12	-97	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	80662526	80665124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUSG00000035242.16_80664130_80664791_1	chr10	+	433	4	ISM	ENSMUSG00000035242.16	ENST00000582888.8	916	5	1601	219	1601	-48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTCTACACTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	80664129	80664791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUSG00000035242.16_80664427_80665010_1	chr10	+	433	3	ISM	ENSMUSG00000035242.16	ENST00000582888.8	916	5	1898	0	1898	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGTTTAAGATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	80664426	80665010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80664468_80664544_80664631_80664704
ENSMUSG00000035242.16_80664573_80665118_1	chr10	+	472	2	ISM	ENSMUSG00000035242.16	ENSMUST00000180036.8	1044	6	2053	6	2044	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTGTGTCTTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	80664572	80665118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80664631_80664704
ENSMUSG00000035245.13_97088962_97111346_1	chr6	-	878	8	ISM	ENSMUSG00000035245.13	ENST00000540955.5	1331	12	11085	-60	11085	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAGCAGAACAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	97111346	97088961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97102480_97102585_97108312_97108420_97111239
ENSMUSG00000035245.13_97089641_97119896_1	chr6	-	876	9	ISM	ENSMUSG00000035245.13	ENST00000540955.5	1331	12	2535	619	2535	-619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATTCACCAAATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	97119896	97089640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786
ENSMUSG00000035245.13_97090802_97121003_1	chr6	-	876	9	ISM	ENSMUSG00000035245.13	ENST00000540955.5	1331	12	1428	1780	1428	-1780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATGGGTGGCAGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	97121003	97090801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97090924_97092961_97093024_97095841_97095911_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900
ENSMUSG00000035245.13_97090910_97122278_1	chr6	-	823	10	ISM	ENSMUSG00000035245.13	ENST00000540955.5	1331	12	153	1888	153	-1888	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATCAGCTCAGGATCACG	NA	NA	NA	NA	NA	NA	NA	NA	97122278	97090909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_97090924_97092961_97093024_97095841_97095911_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221
ENSMUSG00000035247.17_51790505_51806081_1	chr12	-	3094	14	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	70238	0	70238	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACCTGTGTCGTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	51806081	51790504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001
ENSMUSG00000035247.17_51790819_51807924_1	chr12	-	3051	15	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	68395	314	68395	-314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTCCCGTGCTCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	51807924	51790818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796
ENSMUSG00000035247.17_51791281_51814525_1	chr12	-	3062	18	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	61794	776	61794	-776	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGGTGAAGCCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	51814525	51791280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338
ENSMUSG00000035247.17_51791602_51815477_1	chr12	-	3049	18	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	60842	1097	60842	-1097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCCAGGTGGACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	51815477	51791601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311
ENSMUSG00000035247.17_51792287_51815711_1	chr12	-	3068	17	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	60608	1782	60608	-1782	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTAAGTTCCTTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	51815711	51792286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311
ENSMUSG00000035247.17_51798741_51820853_1	chr12	-	3044	15	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	55466	8236	55466	-8236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCCTCAAGCACGAAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	51820853	51798740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816149_51819056_51819234_51819321_51819489_51820609
ENSMUSG00000035247.17_51815356_51841615_1	chr12	-	3048	15	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	34704	24851	34704	-24851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAACACTAACACTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	51841615	51815355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_51816149_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521
ENSMUSG00000035247.17_51815647_51845551_1	chr12	-	3092	17	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	30768	25142	30768	-25142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGTGCGATATCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	51845551	51815646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_51816149_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436
ENSMUSG00000035247.17_51820651_51850570_1	chr12	-	3053	19	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	25749	30146	25749	-30146	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATACCCATGTTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	51850570	51820650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451
ENSMUSG00000035247.17_51820850_51853223_1	chr12	-	3042	20	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	23096	30345	23096	-30345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAGGACATACTAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	51853223	51820849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144
ENSMUSG00000035247.17_51823339_51874289_1	chr12	-	3069	19	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	2030	32834	2030	-32834	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGAAGATGGAGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	51874289	51823338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134
ENSMUSG00000035247.17_51829300_51876101_1	chr12	-	3082	19	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	218	38795	218	-38795	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGACACACCAGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	51876101	51829299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
ENSMUSG00000035247.17_51832619_51876319_1	chr12	-	3107	17	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	0	42114	0	-42114	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCACTTCTTACTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	51876319	51832618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
ENSMUSG00000035248.10_59919690_59930059_1	chr13	-	1212	2	ISM	ENSMUSG00000035248.10	ENST00000375957.5	2234	12	15485	-2	15485	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCCACATTATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	59930059	59919689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59920674_59929831
ENSMUSG00000035248.10_59919912_59932685_1	chr13	-	1195	3	ISM	ENSMUSG00000035248.10	ENST00000375957.5	2234	12	12859	220	12859	-220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATACACAGAAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	59932685	59919911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59920674_59929831_59930158_59932578
ENSMUSG00000035248.10_59920091_59936312_1	chr13	-	1204	6	ISM	ENSMUSG00000035248.10	ENST00000375957.5	2234	12	9232	399	9232	-399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTCGGTGGACGACCAC	NA	NA	NA	NA	NA	NA	NA	NA	59936312	59920090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273
ENSMUSG00000035248.10_59920201_59936354_1	chr13	-	1136	6	ISM	ENSMUSG00000035248.10	ENST00000375957.5	2234	12	9190	509	9190	-509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACGCACATCAAGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	59936354	59920200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273
ENSMUSG00000035248.10_59920262_59936407_1	chr13	-	1128	6	ISM	ENSMUSG00000035248.10	ENST00000375957.5	2234	12	9137	570	9137	-570	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACATCCCCTTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	59936407	59920261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273
ENSMUSG00000035248.10_59920448_59939646_1	chr13	-	1211	9	ISM	ENSMUSG00000035248.10	ENST00000375957.5	2234	12	5898	756	5898	-756	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAATTTTAATATAGT	NA	NA	NA	NA	NA	NA	NA	NA	59939646	59920447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937661_59937752_59939589
ENSMUSG00000035248.10_59920621_59942306_1	chr13	-	1131	10	ISM	ENSMUSG00000035248.10	ENST00000375957.5	2234	12	3238	929	3238	-929	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAGGAATCATGAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	59942306	59920620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937661_59937752_59939589_59939694_59942260
ENSMUSG00000035248.10_59929829_59944737_1	chr13	-	1197	10	ISM	ENSMUSG00000035248.10	ENST00000375957.5	2234	12	807	10137	807	-10137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACAACTCTCCAGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	59944737	59929828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937661_59937752_59939589_59939694_59942260_59942319_59944633
ENSMUSG00000035248.10_59929942_59945529_1	chr13	-	1127	11	ISM	ENSMUSG00000035248.10	ENST00000375957.5	2234	12	15	10250	15	-10250	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGTGGAAGAGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	59945529	59929941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483
ENSMUSG00000035268.15_163545406_163563153_1	chr2	+	176	2	ISM	ENSMUSG00000035268.15	ENSMUST00000109400.3	1059	4	9448	4919	9448	-4455	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCGGAGGCCGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	163545405	163563153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163545476_163563047
ENSMUSG00000035270.16_56072629_56079886_1	chr16	+	630	4	ISM	ENSMUSG00000035270.16	ENST00000193391.8	3619	15	47176	9567	47176	-9567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACCTTACTAAAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	56072628	56079886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_56072711_56074525_56074612_56078266_56078577_56079734
ENSMUSG00000035273.15_100832973_100839189_1	chr5	-	164	3	ISM	ENSMUSG00000035273.15	ENST00000513463.1	1266	10	28263	127	28263	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAACTCTGTATGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	100839189	100832972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100832993_100836686_100836806_100839164
ENSMUSG00000035273.15_100836777_100840076_1	chr5	-	172	3	ISM	ENSMUSG00000035273.15	ENST00000513463.1	1266	10	27376	3931	27376	-3931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTAGGTCCCAGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	100840076	100836776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100836806_100839164_100839280_100840048
ENSMUSG00000035273.15_100839248_100840795_1	chr5	-	184	3	ISM	ENSMUSG00000035273.15	ENST00000513463.1	1266	10	26657	6402	26657	-6402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCATAGAAGTCGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	100840795	100839247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100839280_100840048_100840156_100840750
ENSMUSG00000035273.15_100840804_100843416_1	chr5	-	153	3	ISM	ENSMUSG00000035273.15	ENST00000513463.1	1266	10	24036	7958	24036	-7958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTGATGTGCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	100843416	100840803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100840845_100842017_100842066_100843352
ENSMUSG00000035273.15_100843491_100859239_1	chr5	-	202	3	ISM	ENSMUSG00000035273.15	ENST00000513463.1	1266	10	8213	10645	8213	-10645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATCGATGGGTTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	100859239	100843490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100843522_100856522_100856649_100859194
ENSMUSG00000035273.15_100859211_100867290_1	chr5	-	163	2	ISM	ENSMUSG00000035273.15	ENST00000513463.1	1266	10	162	26365	162	-26365	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAAGTCAACCATGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	100867290	100859210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100859341_100867257
ENSMUSG00000035273.15_100859263_100867340_1	chr5	-	161	2	ISM	ENSMUSG00000035273.15	ENST00000513463.1	1266	10	112	26417	112	-26417	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGATCCGGACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	100867340	100859262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100859341_100867257
ENSMUSG00000035273.15_100859313_100867392_1	chr5	-	163	2	ISM	ENSMUSG00000035273.15	ENST00000513463.1	1266	10	60	26467	60	-26467	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTATCTCCTGCATACTT	NA	NA	NA	NA	NA	NA	NA	NA	100867392	100859312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100859341_100867257
ENSMUSG00000035274.14_85724433_85726938_1	chr9	+	1448	2	FSM	ENSMUSG00000035274.14	ENSMUST00000006559.14	3603	2	0	2155	0	-2155	multi-exon	TRUE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCGACTGCTACATGGC	NA	NA	NA	NA	NA	NA	NA	NA	85724432	85726938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_85724646_85725703
ENSMUSG00000035278.10_80630007_80634028_1	chr10	-	497	6	FSM	ENSMUSG00000035278.10	ENST00000587394.6	477	6	-20	0	-20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGGAGCCACCAAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	80634028	80630006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80630100_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ENSMUSG00000035278.10_80631933_80634460_1	chr10	-	1252	6	NNC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80634460	80631932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633804_80633914
ENSMUSG00000035278.10_80631933_80634460_2	chr10	-	1250	6	NNC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80634460	80631932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633664_80633743_80633812_80633914
ENSMUSG00000035278.10_80632260_80634028_1	chr10	-	480	4	FSM	ENSMUSG00000035278.10	ENST00000586608.3	467	4	35	-48	-20	48	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTGGACTGACCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	80634028	80632259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80632357_80632424_80632489_80633606_80633812_80633914
ENSMUSG00000035296.15_61457057_61462681_1	chr14	-	2207	2	ISM	ENSMUSG00000035296.15	ENSMUST00000077954.13	3515	8	33258	493	33192	-493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTGCCAGTACCACGCGA	NA	NA	NA	NA	NA	NA	NA	NA	61462681	61457056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_61459226_61462643
ENSMUSG00000035296.15_61457375_61474325_1	chr14	-	2237	5	ISM	ENSMUSG00000035296.15	ENSMUST00000077954.13	3515	8	21614	811	21548	-811	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGCACATTGAGGCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	61474325	61457374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_61459226_61462643_61462768_61467020_61467094_61469854_61469975_61474256
ENSMUSG00000035296.15_61457573_61483301_1	chr14	-	2257	7	ISM	ENSMUSG00000035296.15	ENSMUST00000077954.13	3515	8	12638	1009	12572	-1009	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGCTGGAAAAATCAATAC	NA	NA	NA	NA	NA	NA	NA	NA	61483301	61457572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_61459226_61462643_61462768_61467020_61467094_61469854_61469975_61474256_61474345_61477790_61477893_61483204
ENSMUSG00000035296.15_61457756_61495873_1	chr14	-	2257	8	FSM	ENSMUSG00000035296.15	ENSMUST00000077954.13	3515	8	66	1192	0	1137	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACTGAGTGCTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	61495873	61457755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_61459226_61462643_61462768_61467020_61467094_61469854_61469975_61474256_61474345_61477790_61477893_61483204_61483403_61495791
ENSMUSG00000035296.15_61457813_61495894_1	chr14	-	2221	8	FSM	ENSMUSG00000035296.15	ENSMUST00000077954.13	3515	8	45	1249	-21	1080	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGACCAGACCGTGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	61495894	61457812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_61459226_61462643_61462768_61467020_61467094_61469854_61469975_61474256_61474345_61477790_61477893_61483204_61483403_61495791
ENSMUSG00000035297.15_100666175_100678016_1	chr5	+	578	4	ISM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	0	17653	0	-17630	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGTAAATAGTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	100666174	100678016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912
ENSMUSG00000035297.15_100666323_100681257_1	chr5	+	580	5	ISM	ENSMUSG00000035297.15	ENST00000503682.5	1660	10	-3	14389	-3	-14389	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGTAACAAGTGACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	100666322	100681257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107
ENSMUSG00000035297.15_100666323_100695646_1	chr5	+	1663	10	FSM	ENSMUSG00000035297.15	ENST00000503682.5	1660	10	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTACTTGGTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	100666322	100695646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685376_100689364_100689519_100691704_100691790_100695169
ENSMUSG00000035297.15_100675892_100681436_1	chr5	+	497	5	ISM	ENSMUSG00000035297.15	ENST00000503682.5	1660	10	9566	14210	9566	-14210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAGCTCTCTTACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	100675891	100681436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377
ENSMUSG00000035297.15_100676506_100685220_1	chr5	+	517	5	ISM	ENSMUSG00000035297.15	ENST00000503682.5	1660	10	10180	10426	10180	-10426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGCATATGGGATCCTA	NA	NA	NA	NA	NA	NA	NA	NA	100676505	100685220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163
ENSMUSG00000035297.15_100677911_100685334_1	chr5	+	582	4	ISM	ENSMUSG00000035297.15	ENST00000503682.5	1660	10	11585	10312	11585	-10312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGATCATGTCTGACGT	NA	NA	NA	NA	NA	NA	NA	NA	100677910	100685334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_100678017_100681107_100681262_100681377_100681529_100685163
ENSMUSG00000035297.15_100681200_100691789_1	chr5	+	585	5	ISM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	15025	3880	14874	-3857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGCATTTATGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	100681199	100691789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704
ENSMUSG00000035297.15_100681402_100695190_1	chr5	+	520	5	ISM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	15227	479	15076	-456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGACAAGCAGATCCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	100681401	100695190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
ENSMUSG00000035297.15_100681449_100695248_1	chr5	+	531	5	ISM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	15274	421	15123	-398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACGGCCCCGGAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	100681448	100695248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
ENSMUSG00000035297.15_100681509_100695290_1	chr5	+	513	5	ISM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	15334	379	15183	-356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCCAGTGAGCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	100681508	100695290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
ENSMUSG00000035297.15_100685251_100695394_1	chr5	+	510	4	ISM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	19076	275	18925	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCCTTTGCTGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	100685250	100695394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_100685335_100689402_100689519_100691704_100691790_100695169
ENSMUSG00000035297.15_100689494_100695646_1	chr5	+	587	3	ISM	ENSMUSG00000035297.15	ENST00000503682.5	1660	10	23168	0	23168	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTACTTGGTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	100689493	100695646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_100689519_100691704_100691790_100695169
ENSMUSG00000035299.17_168662772_168710440_1	chrX	+	625	2	ISM	ENSMUSG00000035299.17	ENST00000317552.9	2356	10	170	61759	112	-61759	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAAGCCACTCATCCGAA	NA	NA	NA	NA	NA	NA	NA	NA	168662771	168710440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_168662906_168709949
ENSMUSG00000035299.17_168662830_168710492_1	chrX	+	619	2	ISM	ENSMUSG00000035299.17	ENST00000317552.9	2356	10	228	61707	170	-61707	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAATCCCGGACTCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	168662829	168710492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_168662906_168709949
ENSMUSG00000035299.17_168710280_168760025_1	chrX	+	590	3	ISM	ENSMUSG00000035299.17	ENST00000380780.5	2053	9	331	12174	331	-12174	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTTTCCTTGATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	168710279	168760025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_168710666_168749058_168749155_168759917
ENSMUSG00000035299.17_168710471_168767079_1	chrX	+	676	5	ISM	ENSMUSG00000035299.17	ENST00000380780.5	2053	9	522	5120	522	-5120	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCATCTTACTCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	168710470	168767079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_168710666_168749058_168749155_168759917_168760026_168764880_168765030_168766951
ENSMUSG00000035299.17_168710578_168768071_1	chrX	+	646	6	ISM	ENSMUSG00000035299.17	ENST00000380780.5	2053	9	629	4128	629	-4128	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTTCAGCGTGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	168710577	168768071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_168710666_168749058_168749155_168759917_168760026_168764880_168765030_168766951_168767080_168767994
ENSMUSG00000035299.17_168749112_168768971_1	chrX	+	612	6	ISM	ENSMUSG00000035299.17	ENST00000380780.5	2053	9	39163	3228	-13335	-3228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAAGCAGAACCACTACA	NA	NA	NA	NA	NA	NA	NA	NA	168749111	168768971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_168749155_168759917_168760026_168764880_168765030_168766951_168767080_168767994_168768139_168768931
ENSMUSG00000035299.17_168764879_168770580_1	chrX	+	611	5	ISM	ENSMUSG00000035299.17	ENSMUST00000079443.6	2815	7	2432	3214	2432	-1619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGCTCATCGCAAGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	168764878	168770580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_168765030_168766951_168767080_168767994_168768139_168768931_168769094_168770554
ENSMUSG00000035299.17_168764944_168770617_1	chrX	+	583	5	ISM	ENSMUSG00000035299.17	ENSMUST00000079443.6	2815	7	2497	3177	2497	-1582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTCGAGCGCGACGAG	NA	NA	NA	NA	NA	NA	NA	NA	168764943	168770617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_168765030_168766951_168767080_168767994_168768139_168768931_168769094_168770554
ENSMUSG00000035299.17_168764987_168770675_1	chrX	+	598	5	ISM	ENSMUSG00000035299.17	ENSMUST00000079443.6	2815	7	2540	3119	2540	-1524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCAGGGGAGCTACGGAG	NA	NA	NA	NA	NA	NA	NA	NA	168764986	168770675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_168765030_168766951_168767080_168767994_168768139_168768931_168769094_168770554
ENSMUSG00000035299.17_168767009_168771916_1	chrX	+	643	5	ISM	ENSMUSG00000035299.17	ENSMUST00000079443.6	2815	7	4562	1878	4562	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCGTCCTGGGCCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	168767008	168771916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_168767080_168767994_168768139_168768931_168769094_168770554_168770763_168771858
ENSMUSG00000035299.17_168767061_168772004_1	chrX	+	679	5	ISM	ENSMUSG00000035299.17	ENSMUST00000079443.6	2815	7	4614	1790	4614	-195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCGCGTCGGCGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	168767060	168772004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_168767080_168767994_168768139_168768931_168769094_168770554_168770763_168771858
ENSMUSG00000035299.17_168768088_168772021_1	chrX	+	584	4	ISM	ENSMUSG00000035299.17	ENSMUST00000079443.6	2815	7	5641	1773	5641	-178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGGACTACGACAACGG	NA	NA	NA	NA	NA	NA	NA	NA	168768087	168772021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_168768139_168768931_168769094_168770554_168770763_168771858
ENSMUSG00000035299.17_168769026_168772162_1	chrX	+	580	3	ISM	ENSMUSG00000035299.17	ENSMUST00000079443.6	2815	7	6579	1632	6579	-37	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCATCCCGGACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	168769025	168772162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_168769094_168770554_168770763_168771858
ENSMUSG00000035325.17_100509513_100523897_1	chr5	-	1630	8	ISM	ENSMUSG00000035325.17	ENST00000505472.5	4133	27	32074	-11	32074	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATACAGTTAGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100523897	100509512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819
ENSMUSG00000035325.17_100509513_100564025_1	chr5	-	4116	27	FSM	ENSMUSG00000035325.17	ENST00000448323.5	4177	27	66	-5	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	6834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATACAGTTAGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100564025	100509512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ENSMUSG00000035325.17_100509513_100564093_1	chr5	-	4184	27	FSM	ENSMUSG00000035325.17	ENST00000448323.5	4177	27	-2	-5	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATACAGTTAGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100564093	100509512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ENSMUSG00000035325.17_100509648_100526772_1	chr5	-	1596	9	ISM	ENSMUSG00000035325.17	ENST00000505472.5	4133	27	29199	124	29199	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGGTTTTTAAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	100526772	100509647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686
ENSMUSG00000035325.17_100509698_100526811_1	chr5	-	1585	9	ISM	ENSMUSG00000035325.17	ENST00000505472.5	4133	27	29160	174	29160	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTTTCCTGGATTAC	NA	NA	NA	NA	NA	NA	NA	NA	100526811	100509697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686
ENSMUSG00000035325.17_100509754_100526860_1	chr5	-	1578	9	ISM	ENSMUSG00000035325.17	ENST00000505472.5	4133	27	29111	230	29111	158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTTCTTTTTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	100526860	100509753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686
ENSMUSG00000035325.17_100509867_100529194_1	chr5	-	1641	10	ISM	ENSMUSG00000035325.17	ENST00000505472.5	4133	27	26777	343	26777	45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGCTAAGACTGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	100529194	100509866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018
ENSMUSG00000035325.17_100513613_100533162_1	chr5	-	1654	10	ISM	ENSMUSG00000035325.17	ENST00000505472.5	4133	27	22809	4089	22809	-3701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCATTGGAAACACCATC	NA	NA	NA	NA	NA	NA	NA	NA	100533162	100513612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982
ENSMUSG00000035325.17_100521335_100540304_1	chr5	-	1576	13	ISM	ENSMUSG00000035325.17	ENST00000505472.5	4133	27	15667	11811	15667	-11423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGCTCCACCATCATCT	NA	NA	NA	NA	NA	NA	NA	NA	100540304	100521334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253
ENSMUSG00000035325.17_100523067_100540876_1	chr5	-	1674	13	ISM	ENSMUSG00000035325.17	ENST00000505472.5	4133	27	15095	13543	15095	-13155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAACCAGGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	100540876	100523066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721
ENSMUSG00000035325.17_100523854_100541129_1	chr5	-	1582	13	ISM	ENSMUSG00000035325.17	ENST00000505472.5	4133	27	14842	14330	14842	-13942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCACCTGCAGCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	100541129	100523853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061
ENSMUSG00000035329.8_59249240_59265901_1	chr12	-	482	2	FSM	ENSMUSG00000035329.8	ENST00000554190.1	546	2	68	-4	68	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCATTTTTACAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	59265901	59249239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_59249466_59265645
ENSMUSG00000035329.8_59249240_59265901_2	chr12	-	480	2	NNC	ENSMUSG00000035329.8	novel	546	2	NA	NA	68	4	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCATTTTTACAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	59265901	59249239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_59249459_59265640
ENSMUSG00000035342.15_45003639_45014833_1	chr19	+	2091	5	FSM	ENSMUSG00000035342.15	ENSMUST00000039016.14	3062	5	335	636	0	-636	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGGAGGCCCGCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	45003638	45014833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_45003763_45009825_45010276_45011980_45012644_45013157_45013419_45014240
ENSMUSG00000035342.15_45009981_45015108_1	chr19	+	2087	4	ISM	ENSMUSG00000035342.15	ENSMUST00000178087.3	2694	5	3330	433	3330	-361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTCACTGTCGCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	45009980	45015108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_45010276_45011980_45012644_45013157_45013419_45014240
ENSMUSG00000035342.15_45010037_45015169_1	chr19	+	2092	4	ISM	ENSMUSG00000035342.15	ENSMUST00000178087.3	2694	5	3386	372	3386	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCGCATCTACCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	45010036	45015169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_45010276_45011980_45012644_45013157_45013419_45014240
ENSMUSG00000035342.15_45010205_45015324_1	chr19	+	2079	4	ISM	ENSMUSG00000035342.15	ENSMUST00000178087.3	2694	5	3554	217	3554	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGTCAGACCAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	45010204	45015324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_45010276_45011980_45012644_45013157_45013419_45014240
ENSMUSG00000035342.15_45012084_45015493_1	chr19	+	2074	3	ISM	ENSMUSG00000035342.15	ENSMUST00000178087.3	2694	5	5433	48	5433	24	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTTTGTTTTAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	45012083	45015493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_45012644_45013157_45013419_45014240
ENSMUSG00000035351.17_87982854_88010429_1	chr10	+	865	7	ISM	ENSMUSG00000035351.17	ENSMUST00000052355.15	1267	10	0	3823	0	-3821	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTATTTAATATGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	87982853	88010429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247
ENSMUSG00000035351.17_87984022_88012971_1	chr10	+	874	8	ISM	ENSMUSG00000035351.17	ENSMUST00000169309.3	1277	10	1083	1279	1083	-1279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATATCCTGGCAAAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	87984021	88012971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934
ENSMUSG00000035351.17_87984145_88014080_1	chr10	+	893	9	ISM	ENSMUSG00000035351.17	ENSMUST00000169309.3	1277	10	1206	170	1206	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTTGTTCTGGGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	87984144	88014080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
ENSMUSG00000035351.17_87984226_88014106_1	chr10	+	838	9	ISM	ENSMUSG00000035351.17	ENSMUST00000169309.3	1277	10	1287	144	1287	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCCTCTGTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	87984225	88014106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
ENSMUSG00000035351.17_87989466_88014245_1	chr10	+	881	8	ISM	ENSMUSG00000035351.17	ENSMUST00000169309.3	1277	10	6527	5	6527	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGAAAAATATGTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	87989465	88014245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
ENSMUSG00000035354.10_98536108_98555793_1	chr7	-	1787	2	ISM	ENSMUSG00000035354.10	ENSMUST00000037968.10	5157	15	234555	1880	234555	-1880	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTCCCTGCACATTCA	NA	NA	NA	NA	NA	NA	NA	NA	98555793	98536107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98537800_98555698
ENSMUSG00000035354.10_98536500_98638792_1	chr7	-	1749	6	ISM	ENSMUSG00000035354.10	ENSMUST00000037968.10	5157	15	151556	2272	151556	-2272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTCCAAAGCCAGCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	98638792	98536499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741
ENSMUSG00000035354.10_98536707_98653872_1	chr7	-	1750	8	ISM	ENSMUSG00000035354.10	ENSMUST00000037968.10	5157	15	136476	2479	136476	-2479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACTTTGCAAAATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	98653872	98536706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786
ENSMUSG00000035354.10_98537272_98767512_1	chr7	-	1805	14	ISM	ENSMUSG00000035354.10	ENSMUST00000037968.10	5157	15	22836	3044	22836	-3044	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCTCGGGTGACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	98767512	98537271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98758269_98758305_98767394
ENSMUSG00000035367.10_58550288_58558489_1	chr13	+	3171	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	211	473	211	-469	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTGATGTTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	58550287	58558489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_58550604_58554815_58554905_58555723
ENSMUSG00000035367.10_58550360_58558567_1	chr13	+	3177	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	283	395	-154	-391	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATTAAAAAAAATTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	58550359	58558567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_58550604_58554815_58554905_58555723
ENSMUSG00000035367.10_58550514_58558738_1	chr13	+	3194	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	437	224	0	-220	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATAGTATCCTGATACG	NA	NA	NA	NA	NA	NA	NA	NA	58550513	58558738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_58550604_58554815_58554905_58555723
ENSMUSG00000035370.10_80443989_80445543_1	chr10	+	894	3	ISM	ENSMUSG00000035370.10	ENSMUST00000178231.2	4516	6	2134	6074	2134	-6074	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTTTGGCCTGGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	80443988	80445543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80444685_80445163_80445293_80445474
ENSMUSG00000035370.10_80444295_80448296_1	chr10	+	899	5	ISM	ENSMUSG00000035370.10	ENSMUST00000178231.2	4516	6	2440	3321	2440	-3321	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTCTGGTCTGTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	80444294	80448296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175
ENSMUSG00000035372.3_3758293_3767024_1	chr19	+	1065	4	FSM	ENSMUSG00000035372.3	ENSMUST00000039048.2	1882	4	-40	857	-40	-849	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGGTACCACCGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	3758292	3767024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_3758437_3764403_3764626_3765637_3765803_3766490
ENSMUSG00000035372.3_3758411_3767024_1	chr19	+	947	4	FSM	ENSMUSG00000035372.3	ENSMUST00000039048.2	1882	4	78	857	0	-849	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGGTACCACCGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	3758410	3767024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_3758437_3764403_3764626_3765637_3765803_3766490
ENSMUSG00000035372.3_3764561_3767174_1	chr19	+	914	3	ISM	ENSMUSG00000035372.3	ENSMUST00000235837.2	1875	4	6150	706	6150	-699	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCAGCCTGAGCCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	3764560	3767174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_3764626_3765637_3765803_3766490
ENSMUSG00000035372.3_3764561_3767318_1	chr19	+	1058	3	ISM	ENSMUSG00000035372.3	ENSMUST00000235837.2	1875	4	6150	562	6150	-555	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGCCAACATCCAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	3764560	3767318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_3764626_3765637_3765803_3766490
ENSMUSG00000035373.3_81936538_81938091_1	chr11	+	541	3	FSM	ENSMUSG00000035373.3	ENSMUST00000021011.3	801	3	0	260	0	-260	multi-exon	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAATTAGCCATGTACT	NA	NA	NA	NA	NA	NA	NA	NA	81936537	81938091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_81936686_81937343_81937456_81937810
ENSMUSG00000035373.3_81937342_81938199_1	chr11	+	496	2	NNC	ENSMUSG00000035373.3	novel	801	3	NA	NA	804	-152	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTTCTTGTATTATGA	NA	NA	NA	NA	NA	NA	NA	NA	81937341	81938199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_81937456_81937817
ENSMUSG00000035373.3_81937342_81938199_2	chr11	+	503	2	ISM	ENSMUSG00000035373.3	ENSMUST00000021011.3	801	3	804	152	804	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTTCTTGTATTATGA	NA	NA	NA	NA	NA	NA	NA	NA	81937341	81938199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_81937456_81937810
ENSMUSG00000035376.11_34895974_34926723_1	chr16	+	431	4	ISM	ENSMUSG00000035376.11	ENSMUST00000061156.10	3598	7	53176	2824	53176	-2824	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTCCTTTCTCACACC	NA	NA	NA	NA	NA	NA	NA	NA	34895973	34926723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34896065_34920125_34920248_34922315_34922495_34926684
ENSMUSG00000035376.11_34920124_34926860_1	chr16	+	479	3	ISM	ENSMUSG00000035376.11	ENSMUST00000061156.10	3598	7	77326	2687	77326	-2687	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATAAAACAAAATAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	34920123	34926860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34920248_34922315_34922495_34926684
ENSMUSG00000035376.11_34922374_34927029_1	chr16	+	466	2	ISM	ENSMUSG00000035376.11	ENSMUST00000061156.10	3598	7	79576	2518	79576	-2518	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTTGGCCTTTATCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	34922373	34927029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34922495_34926684
ENSMUSG00000035376.11_34922427_34927117_1	chr16	+	501	2	ISM	ENSMUSG00000035376.11	ENSMUST00000061156.10	3598	7	79629	2430	79629	-2430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTGCTCCAACTGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	34922426	34927117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34922495_34926684
ENSMUSG00000035382.10_45818008_45839217_1	chr9	+	2376	16	ISM	ENSMUSG00000035382.10	ENSMUST00000039059.8	3876	17	213	1793	213	-1740	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGATGGCTTCACCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	45818007	45839217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184
ENSMUSG00000035382.10_45818283_45839929_1	chr9	+	2307	17	FSM	ENSMUSG00000035382.10	ENSMUST00000039059.8	3876	17	488	1081	0	-1028	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCACGAAGGCAAAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	45818282	45839929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ENSMUSG00000035382.10_45819866_45840082_1	chr9	+	2365	16	ISM	ENSMUSG00000035382.10	ENSMUST00000216672.2	3599	17	1583	875	1583	-875	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCCAGACCTGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	45819865	45840082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ENSMUSG00000035382.10_45820750_45840349_1	chr9	+	2356	15	ISM	ENSMUSG00000035382.10	ENSMUST00000216672.2	3599	17	2467	608	2467	-608	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGGATTGGCACCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	45820749	45840349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ENSMUSG00000035382.10_45820949_45840542_1	chr9	+	2350	15	ISM	ENSMUSG00000035382.10	ENSMUST00000216672.2	3599	17	2666	415	2666	-415	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACCCTGAAAGCAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	45820948	45840542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ENSMUSG00000035382.10_45821724_45840665_1	chr9	+	2336	14	ISM	ENSMUSG00000035382.10	ENSMUST00000216672.2	3599	17	3441	292	3441	-292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAACTGGGAGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	45821723	45840665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ENSMUSG00000035385.6_81926436_81928279_1	chr11	+	769	3	NNC	ENSMUSG00000035385.6	novel	813	3	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGACTTTGAGTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	81926435	81928279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_81926564_81927308_81927422_81927751
ENSMUSG00000035385.6_81926436_81928279_2	chr11	+	768	3	NNC	ENSMUSG00000035385.6	novel	813	3	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGACTTTGAGTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	81926435	81928279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_81926564_81927314_81927427_81927751
ENSMUSG00000035397.9_80402958_80412595_1	chr10	-	2114	2	FSM	ENSMUSG00000035397.9	ENSMUST00000038558.9	2674	2	560	0	560	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCTTCTGTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	80412595	80402957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80405057_80412580
ENSMUSG00000035397.9_80403421_80413155_1	chr10	-	2211	2	FSM	ENSMUSG00000035397.9	ENSMUST00000038558.9	2674	2	0	463	0	-463	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGGTCACCCTTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80413155	80403420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80405057_80412580
ENSMUSG00000035399.13_163248472_163253339_1	chr2	-	561	2	ISM	ENSMUSG00000035399.13	ENSMUST00000046908.10	1620	4	8109	730	8109	-699	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCTGGCTCGCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	163253339	163248471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_163249010_163253316
ENSMUSG00000035399.13_163248651_163257575_1	chr2	-	594	3	ISM	ENSMUSG00000035399.13	ENSMUST00000046908.10	1620	4	3873	909	3873	-878	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCAATCTGTTTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	163257575	163248650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_163249010_163253316_163253431_163257454
ENSMUSG00000035399.13_163248801_163261448_1	chr2	-	561	4	FSM	ENSMUSG00000035399.13	ENSMUST00000046908.10	1620	4	0	1059	0	-1028	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTACTTCTCTTGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	163261448	163248800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_163249010_163253316_163253431_163257454_163257576_163261331
ENSMUSG00000035401.10_98239807_98251836_1	chr7	-	1723	7	ISM	ENSMUSG00000035401.10	ENST00000524767.5	4087	21	52223	-32	52223	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAGAAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	98251836	98239806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789
ENSMUSG00000035401.10_98239807_98270635_1	chr7	-	2560	12	ISM	ENSMUSG00000035401.10	ENST00000524767.5	4087	21	33424	-32	33424	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAGAAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	98270635	98239806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597
ENSMUSG00000035401.10_98239909_98270701_1	chr7	-	2524	12	ISM	ENSMUSG00000035401.10	ENST00000524767.5	4087	21	33358	70	33358	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGGTCCTAGTGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	98270701	98239908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597
ENSMUSG00000035401.10_98239938_98251882_1	chr7	-	1638	7	ISM	ENSMUSG00000035401.10	ENST00000524767.5	4087	21	52177	99	52177	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCCCAGCCCCTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	98251882	98239937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789
ENSMUSG00000035401.10_98240025_98275742_1	chr7	-	2524	13	ISM	ENSMUSG00000035401.10	ENST00000524767.5	4087	21	28317	186	28317	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTTGAACAACTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	98275742	98240024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672
ENSMUSG00000035401.10_98242706_98279395_1	chr7	-	2532	13	ISM	ENSMUSG00000035401.10	ENST00000524767.5	4087	21	24664	2867	24664	-2867	internal_fragment	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGATGACGAAATGTAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	98279395	98242705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337
ENSMUSG00000035401.10_98242812_98279487_1	chr7	-	2518	13	ISM	ENSMUSG00000035401.10	ENST00000524767.5	4087	21	24572	2973	24572	-2973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAATGTAGAACATATGG	NA	NA	NA	NA	NA	NA	NA	NA	98279487	98242811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337
ENSMUSG00000035401.10_98242882_98279559_1	chr7	-	2520	13	ISM	ENSMUSG00000035401.10	ENST00000524767.5	4087	21	24500	3043	24500	-3043	internal_fragment	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCAGGCCTCTGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	98279559	98242881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337
ENSMUSG00000035401.10_98244161_98270747_1	chr7	-	1705	10	ISM	ENSMUSG00000035401.10	ENST00000524767.5	4087	21	33312	4322	33312	-4322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGGTGGCCAAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	98270747	98244160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597
ENSMUSG00000035401.10_98244205_98289024_1	chr7	-	2540	14	ISM	ENSMUSG00000035401.10	ENST00000524767.5	4087	21	15035	4366	15035	-4366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGAACAAGCACAGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	98289024	98244204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937
ENSMUSG00000035401.10_98244332_98290782_1	chr7	-	2562	15	ISM	ENSMUSG00000035401.10	ENST00000524767.5	4087	21	13277	4493	13277	-4493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACTCTGCAGTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	98290782	98244331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699
ENSMUSG00000035401.10_98244332_98290837_1	chr7	-	2617	15	ISM	ENSMUSG00000035401.10	ENST00000524767.5	4087	21	13222	4493	13222	-4493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACTCTGCAGTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	98290837	98244331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699
ENSMUSG00000035401.10_98246253_98297071_1	chr7	-	2589	16	ISM	ENSMUSG00000035401.10	ENST00000525919.5	4045	20	6988	6414	6988	-6414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATGCAGCAGGTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	98297071	98246252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011
ENSMUSG00000035401.10_98262342_98294415_1	chr7	-	1644	10	ISM	ENSMUSG00000035401.10	ENST00000524767.5	4087	21	9644	22503	9644	-22503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGCTGGAGCCAAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	98294415	98262341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373
ENSMUSG00000035401.10_98264770_98297036_1	chr7	-	1634	11	ISM	ENSMUSG00000035401.10	ENST00000524767.5	4087	21	7023	24931	7023	-24931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTTGTACAAAAGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	98297036	98264769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011
ENSMUSG00000035401.10_98268583_98304008_1	chr7	-	1640	11	ISM	ENSMUSG00000035401.10	ENST00000524767.5	4087	21	51	28744	51	-28744	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGCATCATCACTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	98304008	98268582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950
ENSMUSG00000035401.10_98268640_98304053_1	chr7	-	1628	11	ISM	ENSMUSG00000035401.10	ENST00000524767.5	4087	21	6	28801	6	-28801	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTAGGTCGTGTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	98304053	98268639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950
ENSMUSG00000035413.9_80701212_80712078_1	chr11	+	641	7	FSM	ENSMUSG00000035413.9	ENSMUST00000040865.9	1633	7	211	781	211	-781	multi-exon	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAGGAACGCCTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	80701211	80712078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_80701286_80703331_80703516_80705044_80705177_80706491_80706526_80708328_80708445_80710755_80710816_80712037
ENSMUSG00000035413.9_80703380_80712116_1	chr11	+	557	6	ISM	ENSMUSG00000035413.9	ENSMUST00000040865.9	1633	7	2379	743	2379	-743	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTGACCAATCACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	80703379	80712116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80703516_80705044_80705177_80706491_80706526_80708328_80708445_80710755_80710816_80712037
ENSMUSG00000035413.9_80703385_80712213_1	chr11	+	649	6	ISM	ENSMUSG00000035413.9	ENSMUST00000040865.9	1633	7	2384	646	2384	-646	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTTCCTGCAGGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	80703384	80712213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80703516_80705044_80705177_80706491_80706526_80708328_80708445_80710755_80710816_80712037
ENSMUSG00000035413.9_80703480_80712220_1	chr11	+	561	6	ISM	ENSMUSG00000035413.9	ENSMUST00000040865.9	1633	7	2479	639	2479	-639	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCAGGAACAGTCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	80703479	80712220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80703516_80705044_80705177_80706491_80706526_80708328_80708445_80710755_80710816_80712037
ENSMUSG00000035413.9_80708327_80712525_1	chr11	+	666	3	ISM	ENSMUSG00000035413.9	ENSMUST00000040865.9	1633	7	7326	334	7326	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATTGAGAGACTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	80708326	80712525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_80708445_80710755_80710816_80712037
ENSMUSG00000035420.8_50411682_50415324_1	chr18	+	846	2	FSM	ENSMUSG00000035420.8	ENST00000620555.4	851	2	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCTGGGTTTGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	50411681	50415324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_50411761_50414557
ENSMUSG00000035420.8_50411682_50415324_2	chr18	+	987	3	FSM	ENSMUSG00000035420.8	ENST00000613773.4	992	3	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCTGGGTTTGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	50411681	50415324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_50411761_50413591_50413733_50414557
ENSMUSG00000035435.18_24484173_24508459_1	chr17	-	813	5	ISM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	39301	0	39301	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCCCTTATCTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	24508459	24484172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24484252_24484396_24484588_24486523_24486712_24507969_24508175_24508309
ENSMUSG00000035435.18_24484454_24510554_1	chr17	-	829	5	ISM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	37206	281	37206	-281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGCAGCAGCAGATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	24510554	24484453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24484588_24486523_24486712_24507969_24508175_24508309_24508584_24510526
ENSMUSG00000035435.18_24484513_24510606_1	chr17	-	822	5	ISM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	37154	340	37154	-340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCACCTCAAGAGCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	24510606	24484512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24484588_24486523_24486712_24507969_24508175_24508309_24508584_24510526
ENSMUSG00000035435.18_24484570_24510652_1	chr17	-	811	5	ISM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	37108	397	37108	-397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGTACCAGGCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	24510652	24484569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24484588_24486523_24486712_24507969_24508175_24508309_24508584_24510526
ENSMUSG00000035435.18_24486629_24510794_1	chr17	-	830	4	ISM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	36966	2456	36966	-2456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTATCCGGGGCATCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	24510794	24486628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24486712_24507969_24508175_24508309_24508584_24510526
ENSMUSG00000035435.18_24486695_24510832_1	chr17	-	802	4	ISM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	36928	2522	36928	-2522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTCCTGAGTTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	24510832	24486694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24486712_24507969_24508175_24508309_24508584_24510526
ENSMUSG00000035435.18_24508005_24514132_1	chr17	-	825	4	ISM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	33628	23832	33628	-23832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTCTTTCCTCGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	24514132	24508004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24508175_24508309_24508584_24510526_24510834_24514058
ENSMUSG00000035435.18_24508150_24515291_1	chr17	-	823	5	ISM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	32469	23977	32469	-23977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAACTTTCTTTTTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	24515291	24508149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24508175_24508309_24508584_24510526_24510834_24514058_24514222_24515237
ENSMUSG00000035435.18_24508401_24519325_1	chr17	-	813	5	ISM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	28435	24228	28435	-24228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCTTTCTGGAGCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	24519325	24508400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24508584_24510526_24510834_24514058_24514222_24515237_24515337_24519264
ENSMUSG00000035435.18_24508427_24519400_1	chr17	-	862	5	ISM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	28360	24254	28360	-24254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGGTGGACAATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	24519400	24508426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24508584_24510526_24510834_24514058_24514222_24515237_24515337_24519264
ENSMUSG00000035435.18_24508459_24526448_1	chr17	-	879	6	ISM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	21312	24286	21312	-24286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGCCTACCACTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	24526448	24508458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24508584_24510526_24510834_24514058_24514222_24515237_24515337_24519264_24519421_24526419
ENSMUSG00000035435.18_24508543_24526474_1	chr17	-	821	6	ISM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	21286	24370	21286	-24370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGGGCTTTGATAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	24526474	24508542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24508584_24510526_24510834_24514058_24514222_24515237_24515337_24519264_24519421_24526419
ENSMUSG00000035435.18_24510710_24547520_1	chr17	-	832	7	ISM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	240	26537	240	-26537	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTTTTTAACTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	24547520	24510709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24510834_24514058_24514222_24515237_24515337_24519264_24519421_24526419_24526575_24546612_24546730_24547502
ENSMUSG00000035435.18_24510773_24547565_1	chr17	-	814	7	ISM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	195	26600	195	-26600	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTGGATGCTGGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	24547565	24510772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24510834_24514058_24514222_24515237_24515337_24519264_24519421_24526419_24526575_24546612_24546730_24547502
ENSMUSG00000035435.18_24510814_24547633_1	chr17	-	841	7	ISM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	127	26641	127	-26641	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTACGCCATGCTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	24547633	24510813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24510834_24514058_24514222_24515237_24515337_24519264_24519421_24526419_24526575_24546612_24546730_24547502
ENSMUSG00000035439.14_71703920_71707213_1	chr8	-	502	3	ISM	ENSMUSG00000035439.14	ENSMUST00000110071.3	1452	11	17807	151	17807	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAAGGAAGTTTGGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	71707213	71703919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71704189_71705714_71705899_71707164
ENSMUSG00000035439.14_71704036_71708107_1	chr8	-	536	4	ISM	ENSMUSG00000035439.14	ENSMUST00000110071.3	1452	11	16913	267	16913	-267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGATGAATTACAGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	71708107	71704035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050
ENSMUSG00000035439.14_71704109_71708149_1	chr8	-	505	4	ISM	ENSMUSG00000035439.14	ENSMUST00000110071.3	1452	11	16871	340	16871	-340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGGTGCCCTCACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	71708149	71704108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050
ENSMUSG00000035439.14_71704173_71708209_1	chr8	-	501	4	ISM	ENSMUSG00000035439.14	ENSMUST00000110071.3	1452	11	16811	404	16811	-404	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAACTTTCCTCCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	71708209	71704172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050
ENSMUSG00000035439.14_71705789_71708669_1	chr8	-	495	5	ISM	ENSMUSG00000035439.14	ENSMUST00000110071.3	1452	11	16351	2020	16351	-2020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGCACACAGCTGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	71708669	71705788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651
ENSMUSG00000035439.14_71705836_71708734_1	chr8	-	513	5	ISM	ENSMUSG00000035439.14	ENSMUST00000110071.3	1452	11	16286	2067	16286	-2067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGCCACTGCACAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	71708734	71705835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651
ENSMUSG00000035439.14_71707183_71709195_1	chr8	-	555	5	ISM	ENSMUSG00000035439.14	ENSMUST00000110071.3	1452	11	15825	3414	15825	-3414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCAGGAGCTCCTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	71709195	71707182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102
ENSMUSG00000035439.14_71708291_71725002_1	chr8	-	529	7	ISM	ENSMUSG00000035439.14	ENSMUST00000110071.3	1452	11	18	4522	18	-4522	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAGAGCTCAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	71725002	71708290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71708357_71708651_71708765_71709102_71709196_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ENSMUSG00000035439.14_71708682_71725104_1	chr8	-	535	6	ISM	ENSMUSG00000035439.14	ENSMUST00000110071.3	1452	11	-84	4913	-84	-4913	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATCCTTCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	71725104	71708681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71708765_71709102_71709196_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ENSMUSG00000035439.14_71710000_71725272_1	chr8	-	527	4	ISM	ENSMUSG00000035439.14	ENSMUST00000110071.3	1452	11	-252	6231	-252	-6231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGCCTGACTGTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	71725272	71709999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71710070_71715695_71715749_71721869_71721929_71724927
ENSMUSG00000035443.11_26911024_26918168_1	chr9	+	841	6	ISM	ENSMUSG00000035443.11	ENSMUST00000213683.2	1107	7	8	464	6	-458	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCTACTGGCGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	26911023	26918168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918096
ENSMUSG00000035455.13_11751894_11756130_1	chr11	-	1205	2	ISM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	2829	1606	2802	-1342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGAGCCAAGGATGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	11756130	11751893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_11753064_11756095
ENSMUSG00000035455.13_11751946_11756181_1	chr11	-	1204	2	ISM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	2778	1658	2751	-1394	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGCAGGGTCTGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	11756181	11751945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_11753064_11756095
ENSMUSG00000035455.13_11752051_11758948_1	chr11	-	1187	3	FSM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	11	1763	11	-1499	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCTGGGAGCTGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	11758948	11752050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_11753064_11756095_11756216_11758894
ENSMUSG00000035458.16_4521304_4524093_1	chr7	-	546	4	ISM	ENSMUSG00000035458.16	ENSMUST00000098859.10	912	8	1434	0	1434	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGTGTGTCTGCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	4524093	4521303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4521451_4522396_4522574_4523436_4523527_4523961
ENSMUSG00000035469.18_59438691_59473388_1	chr14	+	2563	12	FSM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	14	1326	0	-1326	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACATGGTGGAGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	59438690	59473388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ENSMUSG00000035469.18_59438925_59473502_1	chr14	+	2443	12	FSM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	248	1212	234	-1212	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATAGAGAAGTGACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	59438924	59473502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ENSMUSG00000035469.18_59455054_59474014_1	chr14	+	2516	9	ISM	ENSMUSG00000035469.18	ENSMUST00000022551.14	3957	13	16363	700	16363	-700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAGGAACAAGAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	59455053	59474014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ENSMUSG00000035469.18_59458883_59474157_1	chr14	+	2484	8	ISM	ENSMUSG00000035469.18	ENSMUST00000022551.14	3957	13	20192	557	20192	-557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGACCTTCTGTAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	59458882	59474157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ENSMUSG00000035469.18_59458937_59474218_1	chr14	+	2491	8	ISM	ENSMUSG00000035469.18	ENSMUST00000022551.14	3957	13	20246	496	20246	-496	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTACTGGTGGTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	59458936	59474218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ENSMUSG00000035469.18_59460686_59474361_1	chr14	+	2502	7	ISM	ENSMUSG00000035469.18	ENSMUST00000022551.14	3957	13	21995	353	21995	-353	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTAGGGTGTTTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	59460685	59474361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ENSMUSG00000035469.18_59462142_59474509_1	chr14	+	2526	6	ISM	ENSMUSG00000035469.18	ENSMUST00000022551.14	3957	13	23451	205	23451	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGGTTATAATCATAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	59462141	59474509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ENSMUSG00000035469.18_59463842_59474708_1	chr14	+	2557	5	ISM	ENSMUSG00000035469.18	ENSMUST00000022551.14	3957	13	25151	6	25151	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCACACTTGTACAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	59463841	59474708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ENSMUSG00000035473.11_80435209_80492531_1	chr17	+	2006	7	FSM	ENSMUSG00000035473.11	ENSMUST00000039205.11	2314	7	309	-1	309	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGACTCTTGTTCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80435208	80492531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_80435335_80445441_80445597_80452408_80452616_80457517_80457600_80488989_80489132_80490620_80490796_80491412
ENSMUSG00000035476.10_84653011_84658033_1	chrX	+	637	2	ISM	ENSMUSG00000035476.10	ENST00000378932.6	3190	7	11337	17122	11337	-17122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTCGGTATAGTACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	84653010	84658033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84653191_84657576
ENSMUSG00000035476.10_84653058_84658120_1	chrX	+	677	2	ISM	ENSMUSG00000035476.10	ENST00000378932.6	3190	7	11384	17035	11384	-17035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCACAAATTCCAAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	84653057	84658120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84653191_84657576
ENSMUSG00000035476.10_84653114_84658173_1	chrX	+	674	2	ISM	ENSMUSG00000035476.10	ENST00000378932.6	3190	7	11440	16982	11440	-16982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACATCTCAGAGTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	84653113	84658173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84653191_84657576
ENSMUSG00000035476.10_84658452_84660045_1	chrX	+	650	2	ISM	ENSMUSG00000035476.10	ENST00000378932.6	3190	7	16778	15110	16778	-15110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGAGCGGTTGAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	84658451	84660045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84659036_84659979
ENSMUSG00000035476.10_84658511_84660087_1	chrX	+	633	2	ISM	ENSMUSG00000035476.10	ENST00000378932.6	3190	7	16837	15068	16837	-15068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGATGCAGAGACGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	84658510	84660087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84659036_84659979
ENSMUSG00000035476.10_84658624_84665227_1	chrX	+	641	3	ISM	ENSMUSG00000035476.10	ENST00000378932.6	3190	7	16950	9928	16950	-9928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTTGACCTCCTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	84658623	84665227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84659036_84659979_84660141_84665159
ENSMUSG00000035476.10_84658846_84674099_1	chrX	+	635	5	ISM	ENSMUSG00000035476.10	ENST00000378932.6	3190	7	17172	1056	17172	-1056	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAACCACCCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	84658845	84674099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84659036_84659979_84660141_84665159_84665254_84671765_84671868_84674011
ENSMUSG00000035476.10_84658899_84674164_1	chrX	+	647	5	ISM	ENSMUSG00000035476.10	ENST00000378932.6	3190	7	17225	991	17225	-991	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGTTGACACCAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	84658898	84674164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84659036_84659979_84660141_84665159_84665254_84671765_84671868_84674011
ENSMUSG00000035476.10_84658963_84674214_1	chrX	+	633	5	ISM	ENSMUSG00000035476.10	ENST00000378932.6	3190	7	17289	941	17289	-941	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAAACTTTGGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	84658962	84674214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84659036_84659979_84660141_84665159_84665254_84671765_84671868_84674011
ENSMUSG00000035476.10_84660022_84674338_1	chrX	+	642	4	ISM	ENSMUSG00000035476.10	ENST00000378932.6	3190	7	18348	817	18348	-817	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAACTCATTACAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	84660021	84674338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84660141_84665159_84665254_84671765_84671868_84674011
ENSMUSG00000035476.10_84660067_84674394_1	chrX	+	653	4	ISM	ENSMUSG00000035476.10	ENST00000378932.6	3190	7	18393	761	18393	-761	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGTACACAGAGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	84660066	84674394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84660141_84665159_84665254_84671765_84671868_84674011
ENSMUSG00000035476.10_84671849_84674647_1	chrX	+	655	2	ISM	ENSMUSG00000035476.10	ENST00000378932.6	3190	7	30175	508	30175	-508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTGTGCAAAATAATGA	NA	NA	NA	NA	NA	NA	NA	NA	84671848	84674647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84671868_84674011
ENSMUSG00000035478.15_80228373_80235256_1	chr10	-	1534	7	FSM	ENSMUSG00000035478.15	ENSMUST00000092295.10	1662	7	128	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	80235256	80228372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
ENSMUSG00000035478.15_80228373_80235256_2	chr10	-	1438	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105349.8	1566	7	128	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	80235256	80228372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
ENSMUSG00000035478.15_80228373_80235256_4	chr10	-	1432	7	NNC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	80235256	80228372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231275_80231430_80235051
ENSMUSG00000035505.15_90362583_90367382_1	chr5	-	849	4	ISM	ENSMUSG00000035505.15	ENSMUST00000118816.6	1307	6	4449	0	4449	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGTGAGATAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	90367382	90362582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_90363035_90365375_90365484_90366770_90366896_90367218
ENSMUSG00000035505.15_90362793_90371561_1	chr5	-	827	6	FSM	ENSMUSG00000035505.15	ENSMUST00000118816.6	1307	6	270	210	270	-210	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTCTATATTTAAATATC	NA	NA	NA	NA	NA	NA	NA	NA	90371561	90362792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_90363035_90365375_90365484_90366770_90366896_90367218_90367383_90370089_90370191_90371474
ENSMUSG00000035505.15_90365393_90371798_1	chr5	-	805	5	ISM	ENSMUSG00000035505.15	ENSMUST00000118816.6	1307	6	33	2810	33	-2810	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAACAGTACCCTCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	90371798	90365392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_90365484_90366770_90366896_90367218_90367383_90370089_90370191_90371474
ENSMUSG00000035509.18_56674963_56693593_1	chr13	+	1349	6	FSM	ENSMUSG00000035509.18	ENST00000467490.5	1375	6	26	0	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATCAGAGGGGGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	56674962	56693593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_56675095_56675530_56675654_56680105_56680419_56684449_56684771_56685377_56685575_56693330
ENSMUSG00000035509.18_56674963_56693593_2	chr13	+	1347	6	NNC	ENSMUSG00000035509.18	novel	1375	6	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATCAGAGGGGGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	56674962	56693593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_56675095_56675530_56675654_56680105_56680414_56684446_56684771_56685377_56685575_56693330
ENSMUSG00000035509.18_56674963_56693593_3	chr13	+	1347	6	NNC	ENSMUSG00000035509.18	novel	1375	6	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATCAGAGGGGGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	56674962	56693593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_56675095_56675530_56675654_56680105_56680419_56684449_56684771_56685377_56685575_56693332
ENSMUSG00000035509.18_56674963_56693593_4	chr13	+	1341	6	NNC	ENSMUSG00000035509.18	novel	1375	6	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATCAGAGGGGGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	56674962	56693593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_56675095_56675538_56675654_56680105_56680419_56684449_56684771_56685377_56685575_56693330
ENSMUSG00000035509.18_56674963_56693593_5	chr13	+	1341	6	NNC	ENSMUSG00000035509.18	novel	1375	6	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATCAGAGGGGGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	56674962	56693593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_56675095_56675530_56675654_56680105_56680419_56684457_56684771_56685377_56685575_56693330
ENSMUSG00000035509.18_56674963_56693593_6	chr13	+	1344	6	NNC	ENSMUSG00000035509.18	novel	1375	6	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATCAGAGGGGGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	56674962	56693593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_56675095_56675530_56675654_56680105_56680414_56684449_56684771_56685377_56685575_56693330
ENSMUSG00000035521.14_25453173_25454241_1	chr17	-	733	5	ISM	ENSMUSG00000035521.14	ENST00000204679.9	1204	11	4705	-1	4705	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCATCCATACTGGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	25454241	25453172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25453465_25453555_25453697_25453781_25453864_25453953_25454086_25454155
ENSMUSG00000035521.14_25453291_25458817_1	chr17	-	1070	10	NNC	ENSMUSG00000035521.14	novel	1143	11	NA	NA	129	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGGTTATGTATTATA	NA	NA	NA	NA	NA	NA	NA	NA	25458817	25453290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_25453465_25453555_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454926_25458748
ENSMUSG00000035521.14_25453291_25458936_1	chr17	-	1115	11	NNC	ENSMUSG00000035521.14	novel	1143	11	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGGTTATGTATTATA	NA	NA	NA	NA	NA	NA	NA	NA	25458936	25453290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_25453465_25453555_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454835_25454929_25458748_25458817_25458887
ENSMUSG00000035521.14_25453291_25458936_2	chr17	-	1115	11	NNC	ENSMUSG00000035521.14	novel	1143	11	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGGTTATGTATTATA	NA	NA	NA	NA	NA	NA	NA	NA	25458936	25453290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_25453465_25453555_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454428_25454507_25454602_25454678_25454763_25454829_25454929_25458748_25458817_25458887
ENSMUSG00000035521.14_25453291_25458936_3	chr17	-	1116	11	NNC	ENSMUSG00000035521.14	novel	1143	11	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGGTTATGTATTATA	NA	NA	NA	NA	NA	NA	NA	NA	25458936	25453290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_25453465_25453555_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454323_25454434_25454507_25454602_25454678_25454763_25454829_25454929_25458748_25458817_25458887
ENSMUSG00000035521.14_25453291_25458936_4	chr17	-	1119	11	NNC	ENSMUSG00000035521.14	novel	1143	11	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGGTTATGTATTATA	NA	NA	NA	NA	NA	NA	NA	NA	25458936	25453290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_25453465_25453555_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454680_25454763_25454829_25454929_25458748_25458817_25458887
ENSMUSG00000035521.14_25453291_25458936_5	chr17	-	1119	11	NNC	ENSMUSG00000035521.14	novel	1143	11	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGGTTATGTATTATA	NA	NA	NA	NA	NA	NA	NA	NA	25458936	25453290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_25453465_25453555_25453697_25453783_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454929_25458748_25458817_25458887
ENSMUSG00000035521.14_25453291_25458936_6	chr17	-	1121	11	FSM	ENSMUSG00000035521.14	ENST00000683887.1	1143	11	10	12	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGGTTATGTATTATA	NA	NA	NA	NA	NA	NA	NA	NA	25458936	25453290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_25453465_25453555_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454929_25458748_25458817_25458887
ENSMUSG00000035521.14_25453782_25458816_1	chr17	-	713	8	ISM	ENSMUSG00000035521.14	ENST00000204679.9	1204	11	130	608	130	-491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTCTGCCTGCCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	25458816	25453781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748
ENSMUSG00000035521.14_25453953_25458936_1	chr17	-	681	8	ISM	ENSMUSG00000035521.14	ENST00000204679.9	1204	11	10	779	10	-662	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGTCTGGGGACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	25458936	25453952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887
ENSMUSG00000035530.14_100210862_100211508_1	chr11	+	142	2	ISM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	151	1414	151	-1414	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGGGTGATGACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	100210861	100211508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100210987_100211491
ENSMUSG00000035530.14_100210918_100211596_1	chr11	+	174	2	ISM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	207	1326	207	-1326	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCAAGGGATCGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	100210917	100211596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100210987_100211491
ENSMUSG00000035530.14_100211534_100211815_1	chr11	+	164	2	ISM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	823	1107	823	-1107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGTAATTCAGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	100211533	100211815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_100211656_100211773
ENSMUSG00000035547.15_97772743_97775649_1	chr7	-	970	4	ISM	ENSMUSG00000035547.15	ENST00000456580.6	2370	12	35665	0	35665	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCACGCCCCTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	97775649	97772742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452
ENSMUSG00000035547.15_97772868_97777802_1	chr7	-	968	5	ISM	ENSMUSG00000035547.15	ENST00000456580.6	2370	12	33512	125	33512	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTAATGCAGTTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	97777802	97772867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679
ENSMUSG00000035547.15_97772986_97778514_1	chr7	-	914	6	ISM	ENSMUSG00000035547.15	ENST00000456580.6	2370	12	32800	243	32800	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCACTCTTCCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	97778514	97772985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450
ENSMUSG00000035547.15_97773055_97778582_1	chr7	-	913	6	ISM	ENSMUSG00000035547.15	ENST00000456580.6	2370	12	32732	312	32732	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCTCACCACTACTCGC	NA	NA	NA	NA	NA	NA	NA	NA	97778582	97773054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450
ENSMUSG00000035547.15_97773230_97780918_1	chr7	-	916	8	ISM	ENSMUSG00000035547.15	ENST00000456580.6	2370	12	30396	487	30396	-362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCCAGGTGCACCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	97780918	97773229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882
ENSMUSG00000035547.15_97774561_97781058_1	chr7	-	911	7	ISM	ENSMUSG00000035547.15	ENST00000456580.6	2370	12	30256	1818	30256	-1693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGGGCGAAAAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	97781058	97774560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882
ENSMUSG00000035547.15_97775047_97782057_1	chr7	-	911	7	ISM	ENSMUSG00000035547.15	ENST00000456580.6	2370	12	29257	2304	29257	-2179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCAACAGGTGAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	97782057	97775046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039
ENSMUSG00000035547.15_97775094_97782126_1	chr7	-	933	7	ISM	ENSMUSG00000035547.15	ENST00000456580.6	2370	12	29188	2351	29188	-2226	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGGTGGCCCAGGTACA	NA	NA	NA	NA	NA	NA	NA	NA	97782126	97775093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039
ENSMUSG00000035547.15_97775531_97784992_1	chr7	-	929	7	ISM	ENSMUSG00000035547.15	ENST00000456580.6	2370	12	26322	2788	26322	-2663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCTACCACCTTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	97784992	97775530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966
ENSMUSG00000035547.15_97775587_97785044_1	chr7	-	925	7	ISM	ENSMUSG00000035547.15	ENST00000456580.6	2370	12	26270	2844	26270	-2719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAATTCCCGCAGCGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	97785044	97775586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966
ENSMUSG00000035547.15_97777677_97785175_1	chr7	-	996	6	ISM	ENSMUSG00000035547.15	ENST00000456580.6	2370	12	26139	4934	26139	-4809	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGCGGGCCCACACCA	NA	NA	NA	NA	NA	NA	NA	NA	97785175	97777676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966
ENSMUSG00000035547.15_97777769_97801038_1	chr7	-	924	7	ISM	ENSMUSG00000035547.15	ENST00000456580.6	2370	12	10276	5026	10276	-4901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGATCAGTATCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	97801038	97777768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018
ENSMUSG00000035547.15_97778451_97801092_1	chr7	-	944	6	ISM	ENSMUSG00000035547.15	ENST00000456580.6	2370	12	10222	5708	10222	-5583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCATGTGCAAGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	97801092	97778450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018
ENSMUSG00000035547.15_97780413_97811186_1	chr7	-	938	6	ISM	ENSMUSG00000035547.15	ENST00000456580.6	2370	12	128	7670	128	-7545	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGGGAATTCTGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	97811186	97780412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801228_97811116
ENSMUSG00000035547.15_97780965_97811311_1	chr7	-	918	5	ISM	ENSMUSG00000035547.15	ENST00000456580.6	2370	12	3	8222	3	-8097	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCAAGTCAGAGAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	97811311	97780964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_97781077_97782039_97782233_97784966_97785176_97801018_97801228_97811116
ENSMUSG00000035551.7_45811213_45826698_2	chr4	-	894	5	FSM	ENSMUSG00000035551.7	ENSMUST00000044297.7	2864	5	225	1745	81	-897	multi-exon	FALSE	canonical	NA	NA	NA	NA	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGTGGAGGGGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	45826698	45811212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_45811381_45813392_45813551_45815471_45815589_45816277_45816388_45826357
ENSMUSG00000035551.7_45811213_45826775_1	chr4	-	971	5	FSM	ENSMUSG00000035551.7	ENSMUST00000044297.7	2864	5	148	1745	4	-897	multi-exon	FALSE	canonical	NA	NA	NA	NA	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGTGGAGGGGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	45826775	45811212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_45811381_45813392_45813551_45815471_45815589_45816277_45816388_45826357
ENSMUSG00000035551.7_45811213_45826775_2	chr4	-	966	5	NNC	ENSMUSG00000035551.7	novel	990	6	NA	NA	4	-897	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGTGGAGGGGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	45826775	45811212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_45811381_45813392_45813551_45815471_45815589_45816277_45816388_45826362
ENSMUSG00000035569.18_123610745_123614343_1	chr8	-	645	4	ISM	ENSMUSG00000035569.18	ENSMUST00000098333.5	7995	13	28383	-145	28383	145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGCAGTGAGGTAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	123614343	123610744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266
ENSMUSG00000035569.18_123625300_123642841_1	chr8	-	865	5	NNC	ENSMUSG00000035569.18	novel	929	6	NA	NA	-115	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCCTCCAGTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	123642841	123625299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_123625456_123626342_123626547_123626717_123626889_123635406_123635539_123642639
ENSMUSG00000035569.18_123625300_123768759_1	chr8	-	943	6	FSM	ENSMUSG00000035569.18	ENST00000642695.1	929	6	-14	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCCTCCAGTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	123768759	123625299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642841_123768687
ENSMUSG00000035575.12_79826184_79834133_1	chr11	-	1160	6	ISM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	19083	1405	19072	-1405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAATCAGAAGTGATAGA	NA	NA	NA	NA	NA	NA	NA	NA	79834133	79826183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056
ENSMUSG00000035575.12_79826245_79834217_1	chr11	-	1183	6	ISM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	18999	1466	18988	-1466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGATCTCTTCTTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	79834217	79826244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056
ENSMUSG00000035575.12_79826422_79837081_1	chr11	-	1153	8	ISM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	16135	1643	16124	-1643	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGGACTGCCTCAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	79837081	79826421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031
ENSMUSG00000035575.12_79826558_79839828_1	chr11	-	1159	9	ISM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	13388	1779	13377	-1779	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGCATATACAGCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	79839828	79826557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716
ENSMUSG00000035575.12_79826676_79841677_1	chr11	-	1196	10	ISM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	11539	1897	11528	-1897	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAACATACTTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	79841677	79826675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595
ENSMUSG00000035575.12_79828518_79846505_1	chr11	-	1146	12	ISM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	6711	3739	6700	-3739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGACTTCAGATTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	79846505	79828517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436
ENSMUSG00000035575.12_79832737_79848214_1	chr11	-	1154	12	ISM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	5002	7958	4991	-7958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCTACAAAAAGGCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	79848214	79832736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166
ENSMUSG00000035575.12_79832953_79849704_1	chr11	-	1170	12	ISM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	3512	8174	3501	-8174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAAGCTCCCATTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	79849704	79832952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611
ENSMUSG00000035575.12_79834186_79853193_1	chr11	-	1237	14	ISM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	23	9407	12	-9407	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTGGGACCGAATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	79853193	79834185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
ENSMUSG00000035576.14_162790689_162813148_1	chr2	+	1724	16	NNC	ENSMUSG00000035576.14	novel	1865	17	NA	NA	0	-3294	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGTACAAGTGCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	162790688	162813148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_162790808_162791377_162791460_162801442_162801525_162802002_162802106_162802866_162803003_162803322_162803415_162806346_162806499_162806921_162806999_162807688_162807775_162807917_162808029_162808465_162808581_162808905_162809006_162809171_162809370_162809476_162809527_162812081_162812240_162813085
ENSMUSG00000035576.14_162790689_162813377_1	chr2	+	1964	16	NNC	ENSMUSG00000035576.14	novel	1993	17	NA	NA	0	-3065	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGAAACATTTTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	162790688	162813377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_162790808_162791377_162791460_162801442_162801525_162802006_162802106_162802866_162803003_162803322_162803415_162806346_162806499_162806921_162806999_162807688_162807775_162807917_162808029_162808465_162808581_162808905_162809006_162809156_162809370_162809476_162809527_162812081_162812240_162813085
ENSMUSG00000035576.14_162790689_162813377_2	chr2	+	1969	16	NNC	ENSMUSG00000035576.14	novel	1993	17	NA	NA	0	-3065	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGAAACATTTTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	162790688	162813377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_162790808_162791377_162791460_162801442_162801525_162802000_162802106_162802866_162803003_162803322_162803415_162806346_162806499_162806921_162806999_162807688_162807775_162807917_162808029_162808465_162808581_162808905_162809006_162809156_162809370_162809476_162809527_162812082_162812240_162813085
ENSMUSG00000035576.14_162790749_162816338_1	chr2	+	1697	17	FSM	ENSMUSG00000035576.14	ENST00000422861.3	1865	17	60	108	60	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGGCGGACATTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	162790748	162816338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_162790808_162791377_162791460_162801442_162801525_162802000_162802106_162802866_162803003_162803322_162803415_162806346_162806499_162806921_162806999_162807688_162807775_162807917_162808029_162808465_162808581_162808905_162809006_162809171_162809370_162809476_162809527_162812081_162812240_162813085_162813149_162816307
ENSMUSG00000035576.14_162791377_162816446_1	chr2	+	1746	16	NNC	ENSMUSG00000035576.14	novel	1865	17	NA	NA	688	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGCGGGGAAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	162791376	162816446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_162791460_162801442_162801525_162802000_162802106_162802866_162803003_162803322_162803415_162806346_162806499_162806921_162806999_162807688_162807775_162807917_162808029_162808465_162808581_162808905_162809006_162809172_162809370_162809476_162809527_162812081_162812240_162813085_162813149_162816307
ENSMUSG00000035576.14_162791377_162816446_2	chr2	+	1747	16	ISM	ENSMUSG00000035576.14	ENST00000422861.3	1865	17	688	0	688	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGCGGGGAAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	162791376	162816446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_162791460_162801442_162801525_162802000_162802106_162802866_162803003_162803322_162803415_162806346_162806499_162806921_162806999_162807688_162807775_162807917_162808029_162808465_162808581_162808905_162809006_162809171_162809370_162809476_162809527_162812081_162812240_162813085_162813149_162816307
ENSMUSG00000035576.14_162791377_162816446_3	chr2	+	1740	16	NNC	ENSMUSG00000035576.14	novel	1865	17	NA	NA	688	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGCGGGGAAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	162791376	162816446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_162791460_162801442_162801525_162802000_162802106_162802866_162803003_162803322_162803415_162806346_162806499_162806921_162806999_162807688_162807775_162807917_162808029_162808465_162808581_162808912_162809006_162809171_162809370_162809476_162809527_162812081_162812240_162813085_162813149_162816307
ENSMUSG00000035576.14_162791377_162816446_4	chr2	+	1741	16	NNC	ENSMUSG00000035576.14	novel	1865	17	NA	NA	688	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGCGGGGAAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	162791376	162816446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_162791460_162801442_162801525_162802006_162802106_162802866_162803003_162803322_162803415_162806346_162806499_162806921_162806999_162807688_162807775_162807917_162808029_162808465_162808581_162808905_162809006_162809171_162809370_162809476_162809527_162812081_162812240_162813085_162813149_162816307
ENSMUSG00000035576.14_162801442_162816446_1	chr2	+	1657	15	NNC	ENSMUSG00000035576.14	novel	1865	17	NA	NA	10753	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGCGGGGAAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	162801441	162816446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_162801525_162802000_162802106_162802866_162803003_162803330_162803415_162806346_162806499_162806921_162806999_162807688_162807775_162807917_162808029_162808465_162808581_162808905_162809006_162809171_162809370_162809476_162809527_162812081_162812240_162813085_162813149_162816307
ENSMUSG00000035585.17_3696374_3703714_1	chr7	+	1470	5	FSM	ENSMUSG00000035585.17	ENSMUST00000108630.8	1779	5	0	309	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGACTGTGTGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	3696373	3703714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3703526
ENSMUSG00000035585.17_3696601_3703886_1	chr7	+	1415	5	FSM	ENSMUSG00000035585.17	ENSMUST00000108630.8	1779	5	227	137	-161	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTGTTCTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	3696600	3703886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3703526
ENSMUSG00000035585.17_3696764_3704023_1	chr7	+	1389	5	FSM	ENSMUSG00000035585.17	ENSMUST00000108630.8	1779	5	390	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTTACAACAATCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	3696763	3704023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3703526
ENSMUSG00000035585.17_3697522_3703714_1	chr7	+	997	4	FSM	ENSMUSG00000035585.17	ENST00000653273.2	928	4	-69	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGACTGTGTGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	3697521	3703714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_3697844_3697976_3698227_3698383_3698621_3703526
ENSMUSG00000035595.7_80010041_80010980_1	chr10	+	449	2	ISM	ENSMUSG00000035595.7	ENSMUST00000041882.7	678	3	1263	0	1263	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGTGTCCTGGTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	80010040	80010980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80010160_80010650
ENSMUSG00000035596.15_3681178_3686846_1	chr7	-	710	2	ISM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	9676	390	9676	-390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTCTGCAACAATCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	3686846	3681177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3681849_3686807
ENSMUSG00000035596.15_3681233_3686892_1	chr7	-	701	2	ISM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	9630	445	9630	-445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGACCTTCCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	3686892	3681232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3681849_3686807
ENSMUSG00000035596.15_3681289_3686961_1	chr7	-	714	2	ISM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	9561	501	9561	-501	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTTCTATTTAAAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	3686961	3681288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3681849_3686807
ENSMUSG00000035596.15_3681534_3688924_1	chr7	-	744	3	ISM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	7598	746	7598	-746	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGCCCCAGCAAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	3688924	3681533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3681849_3686807_3686985_3688672
ENSMUSG00000035596.15_3681774_3691586_1	chr7	-	678	4	ISM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	4936	986	4936	-986	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGCTGTGCCTGGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	3691586	3681773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3681849_3686807_3686985_3688672_3689034_3691521
ENSMUSG00000035596.15_3686877_3694322_1	chr7	-	691	4	ISM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	2200	6089	2200	-6089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCGTGCAGTGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	3694322	3686876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3686985_3688672_3689034_3691521_3691682_3694260
ENSMUSG00000035596.15_3686939_3694387_1	chr7	-	694	4	ISM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	2135	6151	2135	-6151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCGACTGCTATGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	3694387	3686938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3686985_3688672_3689034_3691521_3691682_3694260
ENSMUSG00000035596.15_3688958_3695887_1	chr7	-	720	6	ISM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	635	8170	635	-8170	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGCGCCGCGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	3695887	3688957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
ENSMUSG00000035596.15_3694865_3696291_1	chr7	-	701	3	ISM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	231	14077	231	-14077	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCATTCTCTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	3696291	3694864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3694935_3695038_3695118_3695739
ENSMUSG00000035601.10_45300434_45307919_1	chr4	+	615	5	ISM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	3307	8212	0	-7223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTTTCCTCTGGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	45300433	45307919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891
ENSMUSG00000035601.10_45300561_45308514_1	chr4	+	557	6	ISM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	3434	7617	127	-6628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCACAGTTTACGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	45300560	45308514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496
ENSMUSG00000035601.10_45305794_45315196_1	chr4	+	559	5	ISM	ENSMUSG00000035601.10	ENSMUST00000107800.3	983	8	5360	-54	5360	54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCACACACTTGCCTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	45305793	45315196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ENSMUSG00000035601.10_45308523_45315410_1	chr4	+	565	3	ISM	ENSMUSG00000035601.10	ENSMUST00000107800.3	983	8	8089	-268	8089	268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTACTTTTAAAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	45308522	45315410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_45308565_45314282_45314407_45315011
ENSMUSG00000035606.9_102383316_102420117_1	chr9	+	1958	10	FSM	ENSMUSG00000035606.9	ENST00000503669.1	1993	10	35	0	35	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCTCCCTGCTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	102383315	102420117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_102383478_102386309_102386373_102390171_102390235_102398487_102398563_102400516_102400580_102402596_102402680_102403894_102404004_102405098_102405217_102414799_102414989_102419084
ENSMUSG00000035614.12_65012966_65023526_1	chr12	+	1895	2	ISM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	252	45821	252	-45818	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGATGATTTATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65012965	65023526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65014803_65023468
ENSMUSG00000035614.12_65013092_65024989_1	chr12	+	1915	3	ISM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	378	44358	378	-44355	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGATTGTCACAGATAGG	NA	NA	NA	NA	NA	NA	NA	NA	65013091	65024989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65014803_65023468_65023626_65024942
ENSMUSG00000035614.12_65013158_65025038_1	chr12	+	1898	3	ISM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	444	44309	444	-44306	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTTGGGGACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	65013157	65025038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65014803_65023468_65023626_65024942
ENSMUSG00000035614.12_65013274_65027454_1	chr12	+	1919	4	ISM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	560	41893	560	-41890	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCATCCTTCCATCCTA	NA	NA	NA	NA	NA	NA	NA	NA	65013273	65027454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356
ENSMUSG00000035614.12_65013371_65027541_1	chr12	+	1909	4	ISM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	657	41806	657	-41803	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATAATTCCATTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	65013370	65027541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356
ENSMUSG00000035614.12_65013458_65027616_1	chr12	+	1897	4	ISM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	744	41731	744	-41728	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCTTGCCAACCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	65013457	65027616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356
ENSMUSG00000035614.12_65013667_65029387_1	chr12	+	1905	5	ISM	ENSMUSG00000035614.12	ENST00000361462.7	6435	20	1153	39957	953	-39957	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCCTGATGATATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	65013666	65029387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027666_65029219
ENSMUSG00000035614.12_65013800_65030131_1	chr12	+	1897	6	ISM	ENSMUSG00000035614.12	ENST00000361462.7	6435	20	1286	39213	1086	-39213	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGCAGCTAAGAAAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	65013799	65030131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027666_65029219_65029483_65030101
ENSMUSG00000035614.12_65013935_65030264_1	chr12	+	1895	6	ISM	ENSMUSG00000035614.12	ENST00000361462.7	6435	20	1421	39080	1221	-39080	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGAAAGTGGAGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	65013934	65030264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027666_65029219_65029483_65030101
ENSMUSG00000035614.12_65014285_65042370_1	chr12	+	1896	9	ISM	ENSMUSG00000035614.12	ENST00000361462.7	6435	20	1771	26974	1571	-26974	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATTGAACCGCCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	65014284	65042370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027666_65029219_65029483_65030101_65030341_65033166_65033265_65039328_65039415_65042279
ENSMUSG00000035614.12_65014417_65043727_1	chr12	+	1911	10	ISM	ENSMUSG00000035614.12	ENST00000361462.7	6435	20	1903	25617	1703	-25617	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTTCTTGATGCTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	65014416	65043727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027666_65029219_65029483_65030101_65030341_65033166_65033265_65039328_65039415_65042279_65042456_65043665
ENSMUSG00000035614.12_65014477_65043801_1	chr12	+	1925	10	ISM	ENSMUSG00000035614.12	ENST00000361462.7	6435	20	1963	25543	1763	-25543	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATGACATCCGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	65014476	65043801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027666_65029219_65029483_65030101_65030341_65033166_65033265_65039328_65039415_65042279_65042456_65043665
ENSMUSG00000035614.12_65014719_65053167_1	chr12	+	1930	12	ISM	ENSMUSG00000035614.12	ENST00000361462.7	6435	20	2205	16177	2005	-16177	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGAAACAACCTTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	65014718	65053167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027666_65029219_65029483_65030101_65030341_65033166_65033265_65039328_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092
ENSMUSG00000035614.12_65023559_65053767_1	chr12	+	1906	12	ISM	ENSMUSG00000035614.12	ENST00000361462.7	6435	20	11045	15577	10845	-15577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGCTGGAGAATCGAATA	NA	NA	NA	NA	NA	NA	NA	NA	65023558	65053767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65023626_65024942_65025078_65027356_65027666_65029219_65029483_65030101_65030341_65033166_65033265_65039328_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648
ENSMUSG00000035614.12_65024942_65053884_1	chr12	+	1957	11	ISM	ENSMUSG00000035614.12	ENST00000361462.7	6435	20	12428	15460	12228	-15460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCCTCAGAGGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	65024941	65053884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65025078_65027356_65027666_65029219_65029483_65030101_65030341_65033166_65033265_65039328_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648
ENSMUSG00000035614.12_65027404_65057924_1	chr12	+	1971	12	ISM	ENSMUSG00000035614.12	ENST00000361462.7	6435	20	14890	11420	14690	-11420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCTAACTTTGAAAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	65027403	65057924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65027666_65029219_65029483_65030101_65030341_65033166_65033265_65039328_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886
ENSMUSG00000035614.12_65029297_65063313_1	chr12	+	1899	13	ISM	ENSMUSG00000035614.12	ENST00000361462.7	6435	20	16783	6031	16583	-6031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTGAGTATATTAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	65029296	65063313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65029483_65030101_65030341_65033166_65033265_65039328_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254
ENSMUSG00000035614.12_65030102_65065954_1	chr12	+	1893	13	ISM	ENSMUSG00000035614.12	ENST00000361462.7	6435	20	17588	3390	17388	-3390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGGTGGCTCTAGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	65030101	65065954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65030341_65033166_65033265_65039328_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905
ENSMUSG00000035614.12_65030176_65066024_1	chr12	+	1889	13	ISM	ENSMUSG00000035614.12	ENST00000361462.7	6435	20	17662	3320	17462	-3320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGATTCCTGCAATTG	NA	NA	NA	NA	NA	NA	NA	NA	65030175	65066024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65030341_65033166_65033265_65039328_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905
ENSMUSG00000035614.12_65030200_65066120_1	chr12	+	1961	13	ISM	ENSMUSG00000035614.12	ENST00000361462.7	6435	20	17686	3224	17486	-3224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAGGTAAGGAATCCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	65030199	65066120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65030341_65033166_65033265_65039328_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905
ENSMUSG00000035614.12_65033224_65068277_1	chr12	+	1919	14	ISM	ENSMUSG00000035614.12	ENST00000361462.7	6435	20	20710	1067	20510	-1067	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCACCTCTTAGGGAATA	NA	NA	NA	NA	NA	NA	NA	NA	65033223	65068277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65033265_65039328_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ENSMUSG00000035614.12_65039327_65068391_1	chr12	+	1994	13	ISM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	26613	956	26613	-953	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACTAAATCAGGCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	65039326	65068391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ENSMUSG00000035614.12_65043750_65068653_1	chr12	+	1908	11	ISM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	31036	694	31036	-691	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACCTAAAATAATGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	65043749	65068653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ENSMUSG00000035614.12_65049438_65068776_1	chr12	+	1905	10	ISM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	36724	571	36724	-568	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTGCAATTTGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	65049437	65068776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ENSMUSG00000035614.12_65053744_65069072_1	chr12	+	1902	8	ISM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	41030	275	41030	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATGATGACCAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	65053743	65069072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ENSMUSG00000035614.12_65053804_65069132_1	chr12	+	1902	8	ISM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	41090	215	41090	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATGTAACTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	65053803	65069132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ENSMUSG00000035614.12_65055388_65069345_1	chr12	+	1970	7	ISM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	42674	2	42674	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTGTGACAGGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	65055387	65069345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ENSMUSG00000035614.12_65055439_65069345_1	chr12	+	1919	7	ISM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	42725	2	42725	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTGTGACAGGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	65055438	65069345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ENSMUSG00000035620.16_84753518_84851221_1	chr10	+	599	3	FSM	ENSMUSG00000035620.16	ENST00000549643.5	576	3	-23	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAACATTGAGGCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	84753517	84851221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_84753690_84827983_84828129_84850939
ENSMUSG00000035620.16_84783447_84852187_1	chr10	+	2396	7	ISM	ENSMUSG00000035620.16	ENSMUST00000095385.5	2909	9	29927	124	29906	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTCATATATGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	84783446	84852187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
ENSMUSG00000035620.16_84783542_84852311_1	chr10	+	2425	7	ISM	ENSMUSG00000035620.16	ENSMUST00000095385.5	2909	9	30022	0	30001	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTGTGTGTGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	84783541	84852311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
ENSMUSG00000035629.20_32644329_32656941_1	chr16	-	1403	11	ISM	ENSMUSG00000035629.20	ENSMUST00000040986.15	5257	19	31780	2231	31768	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCCTTTGTGTAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	32656941	32644328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779
ENSMUSG00000035629.20_32644749_32658723_1	chr16	-	1380	11	ISM	ENSMUSG00000035629.20	ENSMUST00000040986.15	5257	19	29998	2651	29986	-420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGCCATTGCTAGATG	NA	NA	NA	NA	NA	NA	NA	NA	32658723	32644748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607
ENSMUSG00000035629.20_32645934_32659632_1	chr16	-	1382	11	ISM	ENSMUSG00000035629.20	ENST00000273582.9	3138	21	38232	1605	29077	-1605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCGACCTTGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	32659632	32645933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32659536
ENSMUSG00000035629.20_32646048_32663388_1	chr16	-	1332	13	ISM	ENSMUSG00000035629.20	ENST00000273582.9	3138	21	34476	1719	25321	-1719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCTCCATCTGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	32663388	32646047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32659536_32659631_32661906_32661952_32663367
ENSMUSG00000035629.20_32647080_32663541_1	chr16	-	1358	11	ISM	ENSMUSG00000035629.20	ENST00000273582.9	3138	21	34323	2751	25168	-2751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCAAGCTGCTTAACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	32663541	32647079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32659536_32659631_32661906_32661952_32663367
ENSMUSG00000035629.20_32647167_32663585_1	chr16	-	1315	11	ISM	ENSMUSG00000035629.20	ENST00000273582.9	3138	21	34279	2838	25124	-2838	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAACTTCTCCAAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	32663585	32647166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32659536_32659631_32661906_32661952_32663367
ENSMUSG00000035629.20_32647231_32663646_1	chr16	-	1312	11	ISM	ENSMUSG00000035629.20	ENST00000273582.9	3138	21	34218	2902	25063	-2902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGCCCAGATGGTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	32663646	32647230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32659536_32659631_32661906_32661952_32663367
ENSMUSG00000035629.20_32648298_32663831_1	chr16	-	1300	9	ISM	ENSMUSG00000035629.20	ENST00000273582.9	3138	21	34033	3969	24878	-3969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCGTGGCAACCTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	32663831	32648297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32659536_32659631_32661906_32661952_32663367
ENSMUSG00000035629.20_32648298_32663886_1	chr16	-	1355	9	ISM	ENSMUSG00000035629.20	ENST00000273582.9	3138	21	33978	3969	24823	-3969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCGTGGCAACCTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	32663886	32648297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32659536_32659631_32661906_32661952_32663367
ENSMUSG00000035629.20_32649039_32664947_1	chr16	-	1324	9	ISM	ENSMUSG00000035629.20	ENST00000273582.9	3138	21	32917	4710	23762	-4710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGCCGGCCTTTCCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	32664947	32649038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32659536_32659631_32661906_32661952_32663367_32663902_32664916
ENSMUSG00000035629.20_32649088_32665004_1	chr16	-	1332	9	ISM	ENSMUSG00000035629.20	ENST00000273582.9	3138	21	32860	4759	23705	-4759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCGGAGCTCGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	32665004	32649087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32659536_32659631_32661906_32661952_32663367_32663902_32664916
ENSMUSG00000035629.20_32649138_32665056_1	chr16	-	1334	9	ISM	ENSMUSG00000035629.20	ENST00000273582.9	3138	21	32808	4809	23653	-4809	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGCCATGGGGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	32665056	32649137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32659536_32659631_32661906_32661952_32663367_32663902_32664916
ENSMUSG00000035629.20_32656333_32668245_1	chr16	-	1366	9	ISM	ENSMUSG00000035629.20	ENST00000273582.9	3138	21	29619	12004	20464	-12004	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGAGTCCGGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	32668245	32656332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32656386_32656779_32656991_32658607_32658724_32659536_32659631_32661906_32661952_32663367_32663902_32664916_32665077_32667586_32667694_32668199
ENSMUSG00000035629.20_32656779_32668361_1	chr16	-	1430	8	ISM	ENSMUSG00000035629.20	ENST00000273582.9	3138	21	29503	12450	20348	-12450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTAGGCCTGTGGCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	32668361	32656778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32656991_32658607_32658724_32659536_32659631_32661906_32661952_32663367_32663902_32664916_32665077_32667586_32667694_32668199
ENSMUSG00000035629.20_32656923_32670091_1	chr16	-	1328	9	ISM	ENSMUSG00000035629.20	ENST00000273582.9	3138	21	27773	12594	18618	-12594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCAGTGTCTAGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	32670091	32656922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32656991_32658607_32658724_32659536_32659631_32661906_32661952_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047
ENSMUSG00000035629.20_32658655_32677324_1	chr16	-	1316	9	ISM	ENSMUSG00000035629.20	ENST00000273582.9	3138	21	20540	14326	11385	-14326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACCTCTCTGAGCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	32677324	32658654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32658724_32659536_32659631_32661906_32661952_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261
ENSMUSG00000035629.20_32659583_32697682_1	chr16	-	1342	9	ISM	ENSMUSG00000035629.20	ENST00000273582.9	3138	21	182	15254	182	-15254	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGCAGTGCAGTCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	32697682	32659582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32659631_32661906_32661952_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32697632
ENSMUSG00000035629.20_32663476_32697839_1	chr16	-	1298	7	ISM	ENSMUSG00000035629.20	ENST00000273582.9	3138	21	25	19147	25	-19147	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGTCCAGCTTCTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	32697839	32663475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32697632
ENSMUSG00000035632.17_3648351_3661785_1	chr7	+	2359	16	ISM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	0	2323	0	-2313	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCGCTGCCATCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	3648350	3661785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607
ENSMUSG00000035632.17_3648497_3662442_1	chr7	+	2314	17	FSM	ENSMUSG00000035632.17	ENST00000617930.2	4160	17	189	1657	146	-1656	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATATGATGTGGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	3648496	3662442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379
ENSMUSG00000035632.17_3654867_3662873_1	chr7	+	2290	12	ISM	ENSMUSG00000035632.17	ENST00000617930.2	4160	17	6559	1226	61	-1225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCAGCCTTCTTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	3654866	3662873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379
ENSMUSG00000035632.17_3654885_3661228_1	chr7	+	1455	10	ISM	ENSMUSG00000035632.17	ENST00000447684.5	2693	13	79	2870	79	-2870	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCCACCCCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	3654884	3661228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3654936_3655031_3655128_3656143_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191
ENSMUSG00000035632.17_3654911_3662936_1	chr7	+	2309	12	ISM	ENSMUSG00000035632.17	ENST00000617930.2	4160	17	6603	1163	105	-1162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCCAGCTGATCACCCG	NA	NA	NA	NA	NA	NA	NA	NA	3654910	3662936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379
ENSMUSG00000035632.17_3654918_3661320_1	chr7	+	1514	10	ISM	ENSMUSG00000035632.17	ENST00000447684.5	2693	13	112	2778	112	-2778	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACCAACAGGCCATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	3654917	3661320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3654936_3655031_3655128_3656143_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191
ENSMUSG00000035632.17_3656292_3663147_1	chr7	+	2306	10	ISM	ENSMUSG00000035632.17	ENST00000617930.2	4160	17	7984	952	1486	-951	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGCTTTCCCCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	3656291	3663147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379
ENSMUSG00000035632.17_3656351_3663198_1	chr7	+	2298	10	ISM	ENSMUSG00000035632.17	ENST00000617930.2	4160	17	8043	901	1545	-900	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGGGCCTCATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	3656350	3663198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379
ENSMUSG00000035632.17_3656560_3663323_1	chr7	+	2305	9	ISM	ENSMUSG00000035632.17	ENST00000617930.2	4160	17	8252	776	1754	-775	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATCAGTCTTCCTATC	NA	NA	NA	NA	NA	NA	NA	NA	3656559	3663323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379
ENSMUSG00000035632.17_3656576_3662226_1	chr7	+	1475	9	ISM	ENSMUSG00000035632.17	ENST00000447684.5	2693	13	1770	1872	1770	-1872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTGTGCTCCCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	3656575	3662226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661903_3662175
ENSMUSG00000035632.17_3658627_3662398_1	chr7	+	1465	7	ISM	ENSMUSG00000035632.17	ENST00000447684.5	2693	13	3821	1700	3821	-1700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGCCAAGGCCCTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	3658626	3662398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661903_3662175
ENSMUSG00000035632.17_3658718_3663606_1	chr7	+	2299	7	ISM	ENSMUSG00000035632.17	ENST00000617930.2	4160	17	10410	493	3912	-492	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTAGGACAATTGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	3658717	3663606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379
ENSMUSG00000035632.17_3658795_3663782_1	chr7	+	1460	8	ISM	ENSMUSG00000035632.17	ENST00000447684.5	2693	13	3989	316	3989	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTTGAGTACCGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	3658794	3663782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661903_3662175_3662506_3663726
ENSMUSG00000035632.17_3658798_3663700_1	chr7	+	2313	7	ISM	ENSMUSG00000035632.17	ENST00000617930.2	4160	17	10490	399	3992	-398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGACCACCTTCTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	3658797	3663700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379
ENSMUSG00000035632.17_3658847_3663846_1	chr7	+	1472	8	ISM	ENSMUSG00000035632.17	ENST00000447684.5	2693	13	4041	252	4041	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCCCTCGCATGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	3658846	3663846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661903_3662175_3662506_3663726
ENSMUSG00000035632.17_3658859_3663756_1	chr7	+	2308	7	ISM	ENSMUSG00000035632.17	ENST00000617930.2	4160	17	10551	343	4053	-342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGCCAGCGGAAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	3658858	3663756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379
ENSMUSG00000035632.17_3658901_3663904_1	chr7	+	1476	8	ISM	ENSMUSG00000035632.17	ENST00000447684.5	2693	13	4095	194	4095	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGCCCAAGGCCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	3658900	3663904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661903_3662175_3662506_3663726
ENSMUSG00000035632.17_3659069_3663879_1	chr7	+	2301	6	ISM	ENSMUSG00000035632.17	ENST00000617930.2	4160	17	10761	220	4263	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGCCCTGCCCTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	3659068	3663879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379
ENSMUSG00000035632.17_3659786_3664099_1	chr7	+	2434	5	ISM	ENSMUSG00000035632.17	ENST00000617930.2	4160	17	11478	0	4980	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	3659785	3664099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379
ENSMUSG00000035637.15_44981461_44990438_1	chr4	+	918	9	FSM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	66	296	66	-296	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAACAACTTGCTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	44981460	44990438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
ENSMUSG00000035637.15_44982966_44990568_1	chr4	+	887	8	ISM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	1571	166	1571	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGGGCAGGCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	44982965	44990568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
ENSMUSG00000035637.15_44983871_44990734_1	chr4	+	1012	7	ISM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	2476	0	2476	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTTGTGTTTGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	44983870	44990734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
ENSMUSG00000035642.17_97199772_97214467_1	chr7	-	517	3	FSM	ENSMUSG00000035642.17	ENST00000533193.5	537	3	30	-10	30	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGCTGTCTTACCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	97214467	97199771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_97199949_97207337_97207463_97214252
ENSMUSG00000035642.17_97199772_97214467_2	chr7	-	515	3	NNC	ENSMUSG00000035642.17	novel	537	3	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGCTGTCTTACCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	97214467	97199771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_97199949_97207339_97207463_97214252
ENSMUSG00000035649.18_44756647_44762475_1	chr4	+	885	2	FSM	ENSMUSG00000035649.18	ENST00000322831.6	858	2	-27	0	-27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTCGTATTGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	44756646	44762475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_44756831_44761774
ENSMUSG00000035649.18_44762109_44895927_1	chr4	+	639	4	ISM	ENSMUSG00000035649.18	ENSMUST00000107824.9	2503	9	5541	36276	5435	-36276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGATTGTCCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	44762108	44895927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44762475_44893532_44893571_44894915_44895042_44895818
ENSMUSG00000035649.18_44929155_44931552_1	chr4	+	598	2	ISM	ENSMUSG00000035649.18	ENSMUST00000147272.8	4251	3	6037	663	6037	-651	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCATGCCTGGAGTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	44929154	44931552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44929236_44931035
ENSMUSG00000035666.15_28715304_28724897_1	chr2	-	3062	4	ISM	ENSMUSG00000035666.15	ENSMUST00000037117.6	6941	5	5401	2987	5401	-2987	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCTCTCCAGACTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	28724897	28715303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561
ENSMUSG00000035673.11_79892826_79903228_1	chr10	-	3337	21	NNC	ENSMUSG00000035673.11	novel	4850	33	NA	NA	8032	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGCCTACAGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	79903228	79892825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110
ENSMUSG00000035673.11_79894306_79922231_1	chr10	-	3334	28	NNC	ENSMUSG00000035673.11	novel	4227	32	NA	NA	-10971	-1056	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGCAGACAGAGCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79922231	79894305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090
ENSMUSG00000035674.14_3620616_3623326_1	chr7	+	480	3	ISM	ENSMUSG00000035674.14	ENSMUST00000076657.11	515	4	244	0	231	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGAATCTGTTTATTGGG	NA	NA	NA	NA	NA	NA	NA	NA	3620615	3623326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3620691_3622428_3622507_3622999
ENSMUSG00000035681.8_112106095_112291641_1	chr10	+	1206	3	ISM	ENSMUSG00000035681.8	ENST00000350228.6	3292	5	60	10528	60	-7314	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTACGAAATCGAAACGGA	NA	NA	NA	NA	NA	NA	NA	NA	112106094	112291641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_112106454_112107591_112108310_112291512
ENSMUSG00000035681.8_112106233_112291789_1	chr10	+	1216	3	ISM	ENSMUSG00000035681.8	ENST00000350228.6	3292	5	198	10380	198	-7166	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCTCCCCTTCTACCTA	NA	NA	NA	NA	NA	NA	NA	NA	112106232	112291789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_112106454_112107591_112108310_112291512
ENSMUSG00000035681.8_112106278_112291901_1	chr10	+	1283	3	ISM	ENSMUSG00000035681.8	ENST00000350228.6	3292	5	243	10268	243	-7054	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCACCCGCCATTTCG	NA	NA	NA	NA	NA	NA	NA	NA	112106277	112291901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_112106454_112107591_112108310_112291512
ENSMUSG00000035681.8_112107651_112292049_1	chr10	+	1196	2	ISM	ENSMUSG00000035681.8	ENSMUST00000219301.2	2944	5	625	6906	61	-6906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCCAATGACCCTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	112107650	112292049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_112108310_112291512
ENSMUSG00000035681.8_112107824_112292229_1	chr10	+	1203	2	ISM	ENSMUSG00000035681.8	ENSMUST00000219301.2	2944	5	798	6726	234	-6726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCTGTCATTGTCAACAA	NA	NA	NA	NA	NA	NA	NA	NA	112107823	112292229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_112108310_112291512
ENSMUSG00000035681.8_112108098_112301088_1	chr10	+	1286	4	ISM	ENSMUSG00000035681.8	ENST00000350228.6	3292	5	2063	1081	508	-691	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTTAGCCATTCCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	112108097	112301088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_112108310_112291512_112292441_112299895_112299991_112301037
ENSMUSG00000035681.8_112108184_112301119_1	chr10	+	1231	4	ISM	ENSMUSG00000035681.8	ENST00000350228.6	3292	5	2149	1050	594	-660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCTGCTACCGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	112108183	112301119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_112108310_112291512_112292441_112299895_112299991_112301037
ENSMUSG00000035681.8_112108242_112301162_1	chr10	+	1216	4	ISM	ENSMUSG00000035681.8	ENST00000350228.6	3292	5	2207	1007	652	-617	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAAGAGGTCCCGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	112108241	112301162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_112108310_112291512_112292441_112299895_112299991_112301037
ENSMUSG00000035681.8_112291822_112299990_1	chr10	+	879	3	ISM	ENSMUSG00000035681.8	ENST00000548513.5	3067	5	184232	2206	140577	1035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACAGCTAACCAGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	112291821	112299990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_112292441_112294394_112294560_112299895
ENSMUSG00000035681.8_112292049_112301779_1	chr10	+	1229	3	ISM	ENSMUSG00000035681.8	ENST00000350228.6	3292	5	186014	390	140804	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGAATATTTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	112292048	112301779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_112292441_112299895_112299991_112301037
ENSMUSG00000035681.8_112292161_112301317_1	chr10	+	820	4	ISM	ENSMUSG00000035681.8	ENST00000548513.5	3067	5	184571	879	140916	-462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCACCGTCTCATAGAC	NA	NA	NA	NA	NA	NA	NA	NA	112292160	112301317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_112292441_112294394_112294560_112299895_112299991_112301037
ENSMUSG00000035681.8_112292161_112301330_1	chr10	+	738	3	ISM	ENSMUSG00000035681.8	ENST00000550433.5	2972	4	184571	866	140916	-449	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGACAGTGAGACGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	112292160	112301330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_112292441_112294394_112294560_112301037
ENSMUSG00000035681.8_112294396_112301625_1	chr10	+	752	2	ISM	ENSMUSG00000035681.8	ENST00000550433.5	2972	4	186806	571	143151	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTACATAGAAATCTAACC	NA	NA	NA	NA	NA	NA	NA	NA	112294395	112301625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_112294560_112301037
ENSMUSG00000035681.8_112294446_112301623_1	chr10	+	795	3	ISM	ENSMUSG00000035681.8	ENST00000548513.5	3067	5	186856	573	143201	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTCTACATAGAAATCTAA	NA	NA	NA	NA	NA	NA	NA	NA	112294445	112301623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_112294560_112299895_112299991_112301037
ENSMUSG00000035681.8_112294498_112301779_1	chr10	+	804	2	ISM	ENSMUSG00000035681.8	ENST00000550433.5	2972	4	186908	417	143253	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGAATATTTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	112294497	112301779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_112294560_112301037
ENSMUSG00000035681.8_112299893_112302209_1	chr10	+	1270	2	ISM	ENSMUSG00000035681.8	ENST00000548513.5	3067	5	192303	-13	148648	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTCTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	112299892	112302209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_112299991_112301037
ENSMUSG00000035683.14_44300876_44363727_1	chr4	+	2007	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	0	948	0	-504	multi-exon	FALSE	canonical	NA	NA	NA	NA	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCAGTCTGATTTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	44300875	44363727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUSG00000035683.14_44300876_44363788_1	chr4	+	2068	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	0	887	0	-443	multi-exon	FALSE	canonical	NA	NA	NA	NA	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGACGTGGTAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	44300875	44363788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUSG00000035683.14_44301002_44363844_1	chr4	+	1998	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	126	831	126	-387	multi-exon	FALSE	canonical	NA	NA	NA	NA	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAGATTAGTGGAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	44301001	44363844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUSG00000035683.14_44303568_44347192_1	chr4	+	1158	12	ISM	ENSMUSG00000035683.14	ENST00000541717.4	2193	16	-21	17040	-21	-17039	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGCAAATAAATTAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	44303567	44347192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340753_44347123
ENSMUSG00000035683.14_44303568_44364232_1	chr4	+	2122	15	FSM	ENSMUSG00000035683.14	ENST00000536329.5	2101	15	-21	0	-21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTCTTTTTTGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	44303567	44364232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_44303667_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340753_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUSG00000035683.14_44303568_44364232_2	chr4	+	2118	15	NNC	ENSMUSG00000035683.14	novel	2101	15	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTCTTTTTTGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	44303567	44364232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_44303667_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340753_44344912_44345024_44347123_44347356_44349847_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUSG00000035683.14_44303568_44364232_3	chr4	+	2120	15	NNC	ENSMUSG00000035683.14	novel	2101	15	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTCTTTTTTGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	44303567	44364232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_44303667_44308905_44309050_44310291_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340753_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUSG00000035683.14_44306989_44347355_1	chr4	+	1137	10	ISM	ENSMUSG00000035683.14	ENST00000541717.4	2193	16	3400	16877	2	-16876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTGCTAGGAAATAAGC	NA	NA	NA	NA	NA	NA	NA	NA	44306988	44347355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340753_44347123
ENSMUSG00000035683.14_44307090_44349907_1	chr4	+	1100	11	ISM	ENSMUSG00000035683.14	ENST00000541717.4	2193	16	3501	14325	103	-14324	internal_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAACGACAGGTGTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	44307089	44349907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340753_44347123_44347356_44349843
ENSMUSG00000035683.14_44308924_44350962_1	chr4	+	1119	11	ISM	ENSMUSG00000035683.14	ENST00000541717.4	2193	16	5335	13270	1937	-13269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAACCAGGCACACATGG	NA	NA	NA	NA	NA	NA	NA	NA	44308923	44350962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340753_44347123_44347356_44349843_44349941_44350941
ENSMUSG00000035683.14_44308995_44350993_1	chr4	+	1079	11	ISM	ENSMUSG00000035683.14	ENST00000541717.4	2193	16	5406	13239	2008	-13238	internal_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAGGAACCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	44308994	44350993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340753_44347123_44347356_44349843_44349941_44350941
ENSMUSG00000035683.14_44309025_44351075_1	chr4	+	1131	11	ISM	ENSMUSG00000035683.14	ENST00000541717.4	2193	16	5436	13157	2038	-13156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTCTGCCAGAGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	44309024	44351075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340753_44347123_44347356_44349843_44349941_44350941
ENSMUSG00000035683.14_44310306_44364368_1	chr4	+	1992	13	ISM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	9430	307	3319	136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATAATTTTTTCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	44310305	44364368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUSG00000035683.14_44312162_44360975_1	chr4	+	1178	10	ISM	ENSMUSG00000035683.14	ENST00000541717.4	2193	16	8573	3257	5175	-3256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAAGCTCGCCGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	44312161	44360975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340753_44347123_44347356_44349843_44349941_44350941_44351111_44360871
ENSMUSG00000035683.14_44318077_44363754_1	chr4	+	1075	10	ISM	ENSMUSG00000035683.14	ENST00000541717.4	2193	16	14488	478	11090	-477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCAGTTTGAACTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	44318076	44363754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340753_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUSG00000035683.14_44325712_44363971_1	chr4	+	1106	8	ISM	ENSMUSG00000035683.14	ENST00000541717.4	2193	16	22123	261	18725	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGGATCTATGGAACTAC	NA	NA	NA	NA	NA	NA	NA	NA	44325711	44363971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44325740_44332879_44332967_44340625_44340753_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUSG00000035683.14_44340717_44364152_1	chr4	+	1081	6	ISM	ENSMUSG00000035683.14	ENST00000541717.4	2193	16	37128	80	33730	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCAGGGGATGCCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	44340716	44364152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_44340753_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUSG00000035697.15_79860510_79866140_1	chr10	+	1774	12	ISM	ENSMUSG00000035697.15	ENST00000590577.2	2203	13	18	766	18	-766	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCAGCTGGAGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	79860509	79866140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862574_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122
ENSMUSG00000035697.15_79860555_79866179_1	chr10	+	1763	12	ISM	ENSMUSG00000035697.15	ENSMUST00000043311.7	3499	22	5068	1123	63	-727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGGAGGAGGCAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	79860554	79866179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122
ENSMUSG00000035697.15_79860639_79866599_1	chr10	+	1749	13	FSM	ENSMUSG00000035697.15	ENST00000590577.2	2203	13	147	307	147	-307	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAAGACGCTTCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	79860638	79866599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862574_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ENSMUSG00000035697.15_79861280_79866675_1	chr10	+	1736	12	ISM	ENSMUSG00000035697.15	ENSMUST00000043311.7	3499	22	5793	627	788	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCAGGCCTGGAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	79861279	79866675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ENSMUSG00000035697.15_79861336_79866731_1	chr10	+	1741	12	ISM	ENSMUSG00000035697.15	ENST00000590577.2	2203	13	844	175	844	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGAGGATGGAGCCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	79861335	79866731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79861381_79861989_79862181_79862266_79862392_79862490_79862574_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ENSMUSG00000035697.15_79861341_79866740_1	chr10	+	1740	12	ISM	ENSMUSG00000035697.15	ENSMUST00000043311.7	3499	22	5854	562	849	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGCCCCGGGTCCGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	79861340	79866740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ENSMUSG00000035697.15_79862093_79866876_1	chr10	+	1735	11	NNC	ENSMUSG00000035697.15	novel	2203	13	NA	NA	1601	-30	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCTGGGTGGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	79862092	79866876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_79862181_79862266_79862392_79862490_79862574_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864809_79865018_79866122_79866211_79866565
ENSMUSG00000035697.15_79862099_79866882_1	chr10	+	1735	11	NNC	ENSMUSG00000035697.15	novel	2203	13	NA	NA	1607	-24	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTGGTGATGGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	79862098	79866882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_79862181_79862266_79862392_79862490_79862574_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866125_79866211_79866565
ENSMUSG00000035697.15_79862122_79866906_1	chr10	+	1734	11	ISM	ENSMUSG00000035697.15	ENSMUST00000043311.7	3499	22	6635	396	1630	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTCAATGTCAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	79862121	79866906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ENSMUSG00000035704.18_97020813_97040856_1	chr7	+	1242	11	FSM	ENSMUSG00000035704.18	ENST00000532306.6	1291	11	-61	110	0	-106	multi-exon	TRUE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGCTGACCTCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	97020812	97040856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUSG00000035704.18_97020813_97040974_1	chr7	+	1423	12	NNC	ENSMUSG00000035704.18	novel	1357	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGGGTGAAGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	97020812	97040974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_97020940_97027429_97027502_97029014_97029125_97029447_97029516_97031781_97031912_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUSG00000035704.18_97020813_97040974_2	chr7	+	1419	12	NNC	ENSMUSG00000035704.18	novel	1357	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGGGTGAAGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	97020812	97040974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_97020940_97027429_97027502_97029014_97029125_97029447_97029516_97031780_97031912_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040739
ENSMUSG00000035704.18_97020813_97040974_3	chr7	+	1424	12	NNC	ENSMUSG00000035704.18	novel	1357	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGGGTGAAGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	97020812	97040974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_97020940_97027429_97027502_97029014_97029125_97029447_97029516_97031780_97031912_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUSG00000035704.18_97020813_97040974_4	chr7	+	1411	12	NNC	ENSMUSG00000035704.18	novel	1357	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGGGTGAAGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	97020812	97040974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_97020940_97027429_97027502_97029014_97029125_97029447_97029516_97031780_97031899_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUSG00000035704.18_97020813_97040974_5	chr7	+	1417	12	NNC	ENSMUSG00000035704.18	novel	1357	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGGGTGAAGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	97020812	97040974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_97020940_97027429_97027502_97029014_97029125_97029447_97029516_97031780_97031912_97032132_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUSG00000035704.18_97022876_97040974_1	chr7	+	1233	10	ISM	ENSMUSG00000035704.18	ENST00000532306.6	1291	11	2002	-8	2002	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGGGTGAAGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	97022875	97040974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUSG00000035704.18_97027306_97040974_1	chr7	+	1149	9	NNC	ENSMUSG00000035704.18	novel	1291	11	NA	NA	6432	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1058	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGGGTGAAGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	97027305	97040974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032132_97032230_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUSG00000035704.18_97027306_97040974_2	chr7	+	1156	9	ISM	ENSMUSG00000035704.18	ENST00000532306.6	1291	11	6432	-8	6432	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGGGTGAAGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	97027305	97040974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUSG00000035704.18_97027430_97040974_1	chr7	+	1032	9	ISM	ENSMUSG00000035704.18	ENST00000532306.6	1291	11	6556	-8	6556	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGGGTGAAGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	97027429	97040974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUSG00000035704.18_97027430_97040974_2	chr7	+	1293	11	ISM	ENSMUSG00000035704.18	ENST00000530608.6	1357	12	6556	-2	6556	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGGGTGAAGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	97027429	97040974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUSG00000035704.18_97031822_97040755_1	chr7	+	842	8	ISM	ENSMUSG00000035704.18	ENST00000376156.7	1617	13	10948	217	10948	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGGAAACTGTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	97031821	97040755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040675
ENSMUSG00000035704.18_97031864_97040856_1	chr7	+	901	8	ISM	ENSMUSG00000035704.18	ENST00000376156.7	1617	13	10990	116	10990	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGCTGACCTCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	97031863	97040856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040675
ENSMUSG00000035704.18_97032212_97040959_1	chr7	+	874	7	ISM	ENSMUSG00000035704.18	ENST00000376156.7	1617	13	11338	13	11338	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGAATAAAGAAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	97032211	97040959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040675
ENSMUSG00000035711.6_55672129_55676368_1	chr13	-	283	3	ISM	ENSMUSG00000035711.6	ENST00000377112.8	497	4	712	97	-17	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGCCAAGATGACATCC	NA	NA	NA	NA	NA	NA	NA	NA	55676368	55672128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_55672205_55672293_55672394_55676261
ENSMUSG00000035726.9_52398736_52401898_1	chr14	-	772	4	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	32975	865	32975	-865	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCTTACCTTGAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	52401898	52398735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878
ENSMUSG00000035726.9_52398898_52408341_1	chr14	-	778	5	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	26532	1027	26532	-1027	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTGATCCCATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	52408341	52398897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283
ENSMUSG00000035726.9_52398980_52408393_1	chr14	-	748	5	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	26480	1109	26480	-1109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGCCCACCAGGACATG	NA	NA	NA	NA	NA	NA	NA	NA	52408393	52398979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283
ENSMUSG00000035726.9_52399176_52409567_1	chr14	-	761	7	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	25306	1305	25306	-1305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGACACAGCTCTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	52409567	52399175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494
ENSMUSG00000035726.9_52400162_52409986_1	chr14	-	761	7	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	24887	2291	24887	-2291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGAAGCACGAAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	52409986	52400161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904
ENSMUSG00000035726.9_52400700_52411003_1	chr14	-	762	7	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	23870	2829	23870	-2829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATGAAGAGGAAGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	52411003	52400699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927
ENSMUSG00000035726.9_52401933_52411298_1	chr14	-	745	7	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	23575	4062	23575	-4062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGAGGGCTTCTTTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	52411298	52401932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233
ENSMUSG00000035726.9_52408303_52411496_1	chr14	-	756	7	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	23377	10432	23377	-10432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCAAGGAGTGGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	52411496	52408302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452
ENSMUSG00000035726.9_52408356_52411552_1	chr14	-	759	7	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	23321	10485	23321	-10485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAGCAAGAAAGTCACGA	NA	NA	NA	NA	NA	NA	NA	NA	52411552	52408355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452
ENSMUSG00000035726.9_52409554_52413875_1	chr14	-	749	7	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	20998	11683	20998	-11683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAGAGGCCCTAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	52413875	52409553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816
ENSMUSG00000035726.9_52409976_52414099_1	chr14	-	752	7	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	20774	12105	20774	-12105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAGAGATCACTACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	52414099	52409975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066
ENSMUSG00000035726.9_52410999_52414490_1	chr14	-	794	7	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	20383	13128	20383	-13128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATATCAAGCATGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	52414490	52410998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405
ENSMUSG00000035726.9_52411489_52415596_1	chr14	-	756	7	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	19277	13618	19277	-13618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAGACCAGAGAAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	52415596	52411488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500
ENSMUSG00000035726.9_52413861_52417685_1	chr14	-	794	8	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	17188	15990	17188	-15990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTTGGCATTGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	52417685	52413860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557
ENSMUSG00000035726.9_52414086_52418543_1	chr14	-	780	8	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	16330	16215	16330	-16215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAACAGCAGATTCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	52418543	52414085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473
ENSMUSG00000035726.9_52414636_52419120_1	chr14	-	772	7	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	15753	16765	15753	-16765	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGTGGGGATTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	52419120	52414635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993
ENSMUSG00000035726.9_52416958_52420550_1	chr14	-	771	6	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	14323	19087	14323	-19087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCTGAACAAAATTACAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	52420550	52416957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468
ENSMUSG00000035726.9_52417660_52421434_1	chr14	-	744	6	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	13439	19789	13439	-19789	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGTTCGCACTCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	52421434	52417659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384
ENSMUSG00000035726.9_52418578_52434676_1	chr14	-	747	6	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	197	20707	197	-20707	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAATACCTAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	52434676	52418577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ENSMUSG00000035726.9_52419079_52434873_1	chr14	-	811	5	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	0	21208	0	-21208	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAGAAAGCAGCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	52434873	52419078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ENSMUSG00000035754.9_79795989_79803649_1	chr10	+	1520	10	FSM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	3	2388	3	-2388	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAGCAATCAGTCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	79795988	79803649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ENSMUSG00000035754.9_79795989_79803706_1	chr10	+	1577	10	FSM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	3	2331	3	-2331	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCTACCTCAAATACCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	79795988	79803706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ENSMUSG00000035754.9_79796103_79803748_1	chr10	+	1505	10	FSM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	117	2289	117	-2289	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCTGCAACTGACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	79796102	79803748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ENSMUSG00000035754.9_79796834_79803870_1	chr10	+	1525	9	ISM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	848	2167	848	-2167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACAGCCTCCTATGACAT	NA	NA	NA	NA	NA	NA	NA	NA	79796833	79803870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ENSMUSG00000035754.9_79801074_79804132_1	chr10	+	1510	7	ISM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	5088	1905	5088	-1905	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGAGCCATAACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	79801073	79804132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ENSMUSG00000035754.9_79802039_79804463_1	chr10	+	1586	5	ISM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	6053	1574	6053	-1574	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGCAACAGGAGTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	79802038	79804463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ENSMUSG00000035754.9_79802176_79804571_1	chr10	+	1631	4	ISM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	6190	1466	6190	-1466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCCACTGAAGGGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	79802175	79804571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79802304_79802393_79802561_79803153_79803223_79803304
ENSMUSG00000035754.9_79802298_79804571_1	chr10	+	1599	3	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	6312	-1466	intron_retention	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCCACTGAAGGGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	79802297	79804571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_79802561_79803153_79803223_79803304
ENSMUSG00000035754.9_79803166_79804758_1	chr10	+	1511	2	ISM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	7180	1279	7180	-1279	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCTGTCTCATGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	79803165	79804758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79803223_79803304
ENSMUSG00000035757.18_88973287_88983651_1	chr15	+	1716	7	ISM	ENSMUSG00000035757.18	ENSMUST00000082439.6	2383	9	0	892	0	-892	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCGGTTCCCGGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	88973286	88983651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88973869_88976906_88977111_88978339_88978527_88979801_88979933_88980741_88981023_88982834_88982980_88983465
ENSMUSG00000035757.18_88973460_88983946_1	chr15	+	1700	8	ISM	ENSMUSG00000035757.18	ENSMUST00000082439.6	2383	9	173	597	173	-597	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCACACACTATCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	88973459	88983946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88973869_88976906_88977111_88978339_88978527_88979801_88979933_88980741_88981023_88982834_88982980_88983465_88983652_88983789
ENSMUSG00000035757.18_88973723_88984208_1	chr15	+	1612	9	FSM	ENSMUSG00000035757.18	ENSMUST00000082439.6	2383	9	436	335	436	-335	multi-exon	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGGAGTCTCCCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	88973722	88984208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_88973869_88976906_88977111_88978339_88978527_88979801_88979933_88980741_88981023_88982834_88982980_88983465_88983652_88983789_88983947_88984033
ENSMUSG00000035757.18_88976964_88984395_1	chr15	+	1596	8	ISM	ENSMUSG00000035757.18	ENSMUST00000082439.6	2383	9	3677	148	3677	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGAATATCAGTCTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	88976963	88984395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88977111_88978339_88978527_88979801_88979933_88980741_88981023_88982834_88982980_88983465_88983652_88983789_88983947_88984033
ENSMUSG00000035757.18_88977014_88984543_1	chr15	+	1694	8	ISM	ENSMUSG00000035757.18	ENSMUST00000082439.6	2383	9	3727	0	3727	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGTCACTGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	88977013	88984543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88977111_88978339_88978527_88979801_88979933_88980741_88981023_88982834_88982980_88983465_88983652_88983789_88983947_88984033
ENSMUSG00000035757.18_88977059_88984543_1	chr15	+	1649	8	ISM	ENSMUSG00000035757.18	ENSMUST00000082439.6	2383	9	3772	0	3772	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGTCACTGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	88977058	88984543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88977111_88978339_88978527_88979801_88979933_88980741_88981023_88982834_88982980_88983465_88983652_88983789_88983947_88984033
ENSMUSG00000035762.12_84420386_84441570_1	chr13	+	660	7	NNC	ENSMUSG00000035762.12	novel	1345	8	NA	NA	4	-1810	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGACTCTGCTTCTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84420385	84441570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_84420447_84430867_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440578_84440677_84441499
ENSMUSG00000035762.12_84430876_84442737_1	chr13	+	633	7	NNC	ENSMUSG00000035762.12	novel	1345	8	NA	NA	10494	-643	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATCCAGAAGCCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	84430875	84442737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440578_84440677_84441499_84441597_84442721
ENSMUSG00000035762.12_84430923_84442791_1	chr13	+	640	7	NNC	ENSMUSG00000035762.12	novel	1345	8	NA	NA	10541	-589	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGCTTACCCTGAACTAC	NA	NA	NA	NA	NA	NA	NA	NA	84430922	84442791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440578_84440677_84441499_84441597_84442721
ENSMUSG00000035762.12_84432131_84442974_1	chr13	+	676	5	NNC	ENSMUSG00000035762.12	novel	1345	8	NA	NA	11749	-406	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCAGTATTTGACAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	84432130	84442974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_84432245_84434803_84434918_84440578_84440677_84441499_84441597_84442721
ENSMUSG00000035762.12_84432197_84443019_1	chr13	+	655	5	NNC	ENSMUSG00000035762.12	novel	1345	8	NA	NA	11815	-361	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGTCACACTTTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	84432196	84443019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_84432245_84434803_84434918_84440578_84440677_84441499_84441597_84442721
ENSMUSG00000035762.12_84440579_84443163_1	chr13	+	633	3	ISM	ENSMUSG00000035762.12	ENST00000511218.5	1345	8	20197	217	20197	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAACTCATGAGATAGG	NA	NA	NA	NA	NA	NA	NA	NA	84440578	84443163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_84440673_84441499_84441597_84442721
ENSMUSG00000035765.11_75151852_75420037_1	chr18	+	2456	17	NNC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGACTTATTTTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	75151851	75420037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363066_75363244_75376355_75376470_75419690
ENSMUSG00000035765.11_75151852_75420037_2	chr18	+	2456	17	NNC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	879	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGACTTATTTTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	75151851	75420037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259901_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ENSMUSG00000035765.11_75151852_75420037_3	chr18	+	2453	17	NNC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	947	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGACTTATTTTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	75151851	75420037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188437_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ENSMUSG00000035765.11_75151852_75420037_4	chr18	+	2455	17	NNC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGACTTATTTTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	75151851	75420037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215572_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ENSMUSG00000035765.11_75213338_75295585_1	chr18	+	950	8	ISM	ENSMUSG00000035765.11	ENST00000675505.1	2235	17	37190	124262	23586	56095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTCCCCCCGCTCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	75213337	75295585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75295537
ENSMUSG00000035765.11_75213385_75295688_1	chr18	+	1006	8	ISM	ENSMUSG00000035765.11	ENST00000675505.1	2235	17	37237	124159	23633	56198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGCCTCCAGGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	75213384	75295688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75295537
ENSMUSG00000035765.11_75247915_75363089_1	chr18	+	940	8	ISM	ENSMUSG00000035765.11	ENST00000675505.1	2235	17	71767	56758	58163	-56758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCGGATGATGCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	75247914	75363089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75295537_75295703_75332233_75332337_75363060
ENSMUSG00000035765.11_75247962_75363147_1	chr18	+	951	8	ISM	ENSMUSG00000035765.11	ENST00000675505.1	2235	17	71814	56700	58210	-56700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAACTTGGTGTACGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	75247961	75363147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75295537_75295703_75332233_75332337_75363060
ENSMUSG00000035765.11_75248016_75363195_1	chr18	+	945	8	ISM	ENSMUSG00000035765.11	ENST00000675505.1	2235	17	71868	56652	58264	-56652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGAACTCATCCCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	75248015	75363195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75295537_75295703_75332233_75332337_75363060
ENSMUSG00000035765.11_75252289_75419713_1	chr18	+	995	9	ISM	ENSMUSG00000035765.11	ENST00000675505.1	2235	17	76141	134	62537	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACGTGGAGGAAGAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	75252288	75419713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75295537_75295703_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ENSMUSG00000035765.11_75256529_75419847_1	chr18	+	1057	8	ISM	ENSMUSG00000035765.11	ENST00000675505.1	2235	17	80381	0	66777	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCCACGCCCACCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	75256528	75419847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_75256655_75258494_75258609_75259895_75259991_75295537_75295703_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ENSMUSG00000035770.9_105146692_105157141_1	chr8	-	1411	9	ISM	ENSMUSG00000035770.9	ENST00000443351.6	1499	12	12302	-281	12295	281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAGAAACCAGATAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	105157141	105146691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032
ENSMUSG00000035770.9_105146819_105164051_1	chr8	-	1402	10	ISM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	5628	2507	5385	154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGACAGTCCAGGAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	105164051	105146818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994
ENSMUSG00000035770.9_105146872_105164101_1	chr8	-	1399	10	ISM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	5578	2560	5335	101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCAGTTGCGTGTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	105164101	105146871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994
ENSMUSG00000035770.9_105146972_105164187_1	chr8	-	1385	10	ISM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	5492	2660	5249	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTGCAGCTGGCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	105164187	105146971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994
ENSMUSG00000035770.9_105154678_105169180_1	chr8	-	592	5	ISM	ENSMUSG00000035770.9	ENST00000443351.6	1499	12	263	7705	256	-54	internal_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTCTTTGAAGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	105169180	105154677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105154814_105156046_105156141_105157032_105157203_105167105_105167223_105169105
ENSMUSG00000035770.9_105156047_105169376_1	chr8	-	505	5	ISM	ENSMUSG00000035770.9	ENST00000443351.6	1499	12	67	9074	60	-1423	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCCTTGGGATGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	105169376	105156046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105156141_105157032_105157203_105167105_105167223_105169105_105169180_105169326
ENSMUSG00000035770.9_105164159_105169380_1	chr8	-	195	3	ISM	ENSMUSG00000035770.9	ENST00000440564.6	869	6	56	9535	56	-9535	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCAGCTGAGTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	105169380	105164158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105164226_105169105_105169180_105169326
ENSMUSG00000035770.9_105164204_105169436_1	chr8	-	206	3	ISM	ENSMUSG00000035770.9	ENST00000440564.6	869	6	0	9580	0	-9580	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAGATGGAGACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	105169436	105164203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105164226_105169105_105169180_105169326
ENSMUSG00000035772.12_28358102_28361190_1	chr2	+	2048	4	NNC	ENSMUSG00000035772.12	novel	2080	4	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTCTAGAACTTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	28358101	28361190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_28358155_28358254_28358372_28358840_28358963_28359434
ENSMUSG00000035772.12_28358102_28361190_2	chr2	+	2050	4	NNC	ENSMUSG00000035772.12	novel	2080	4	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTCTAGAACTTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	28358101	28361190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_28358149_28358254_28358372_28358832_28358963_28359434
ENSMUSG00000035776.15_70464479_70472732_1	chrX	-	2023	3	ISM	ENSMUSG00000035776.15	ENSMUST00000080035.11	3327	9	63519	813	63500	-813	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCATTTGGCCAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	70472732	70464478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_70466356_70467629_70467696_70472652
ENSMUSG00000035776.15_70464630_70484217_1	chrX	-	2104	6	ISM	ENSMUSG00000035776.15	ENSMUST00000080035.11	3327	9	52034	964	52015	-964	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCCTTATTCTTCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	70484217	70464629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130
ENSMUSG00000035776.15_70464742_70484741_1	chrX	-	2054	7	ISM	ENSMUSG00000035776.15	ENSMUST00000080035.11	3327	9	51510	1076	51491	-1076	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCCTTTGGTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	70484741	70464741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679
ENSMUSG00000035776.15_70464868_70536211_1	chrX	-	2085	9	FSM	ENSMUSG00000035776.15	ENSMUST00000080035.11	3327	9	40	1202	21	-1202	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCTTGAGTGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	70536211	70464867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484752_70494216_70494280_70536127
ENSMUSG00000035776.15_70467630_70536211_1	chrX	-	523	7	FSM	ENSMUSG00000035776.15	ENST00000355149.8	544	7	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGACTTCTCAGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	70536211	70467629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484212_70494212_70494280_70536127
ENSMUSG00000035781.15_79746072_79747994_1	chr10	-	1044	3	ISM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	4846	186	4846	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCCAGAAGCCTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	79747994	79746071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79746974_79747775_79747832_79747908
ENSMUSG00000035781.15_79746249_79748528_1	chr10	-	999	5	ISM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	4312	363	4312	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGCCATGTGCCATGAACC	NA	NA	NA	NA	NA	NA	NA	NA	79748528	79746248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482
ENSMUSG00000035781.15_79746354_79749091_1	chr10	-	1002	6	ISM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	3749	468	3749	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTCCCCAGGACACTTT	NA	NA	NA	NA	NA	NA	NA	NA	79749091	79746353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058
ENSMUSG00000035781.15_79746357_79749094_1	chr10	-	1002	6	ISM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	3746	471	3746	-285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGACCTCCCCAGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	79749094	79746356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058
ENSMUSG00000035781.15_79746388_79749162_1	chr10	-	1039	6	ISM	ENSMUSG00000035781.15	ENSMUST00000171416.2	1543	9	3678	316	3678	-316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGGTGGCTGGTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	79749162	79746387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058
ENSMUSG00000035781.15_79746435_79749163_1	chr10	-	993	6	ISM	ENSMUSG00000035781.15	ENSMUST00000171416.2	1543	9	3677	363	3677	-363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTCTGTTGTGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	79749163	79746434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058
ENSMUSG00000035781.15_79746477_79749180_1	chr10	-	968	6	ISM	ENSMUSG00000035781.15	ENSMUST00000171416.2	1543	9	3660	405	3660	-405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGGGGAGGCACAACCA	NA	NA	NA	NA	NA	NA	NA	NA	79749180	79746476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058
ENSMUSG00000035781.15_79746690_79752753_1	chr10	-	1007	8	FSM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	87	804	87	-618	multi-exon	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGACCTAATGGGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	79752753	79746689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749546_79752656
ENSMUSG00000035783.10_34218623_34220899_1	chr19	-	771	2	ISM	ENSMUSG00000035783.10	ENSMUST00000039631.10	2035	9	12091	133	12091	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4564	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTGACCAGATAGGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34220899	34218622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_34219211_34220716
ENSMUSG00000035783.10_34218774_34222476_1	chr19	-	784	3	ISM	ENSMUSG00000035783.10	ENSMUST00000039631.10	2035	9	10514	284	10514	-284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4659	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGAGGAAGGTCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	34222476	34218773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_34219211_34220716_34220899_34222311
ENSMUSG00000035783.10_34218945_34223599_1	chr19	-	762	4	ISM	ENSMUSG00000035783.10	ENSMUST00000039631.10	2035	9	9391	455	9391	-455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4099	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGACATGTGCTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	34223599	34218944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_34219211_34220716_34220899_34222311_34222504_34223477
ENSMUSG00000035783.10_34219119_34225934_1	chr19	-	824	6	ISM	ENSMUSG00000035783.10	ENSMUST00000039631.10	2035	9	7056	629	7056	-629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGAATACGACGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	34225934	34219118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_34219211_34220716_34220899_34222311_34222504_34223477_34223640_34224051_34224137_34225823
ENSMUSG00000035783.10_34220779_34229843_1	chr19	-	818	7	ISM	ENSMUSG00000035783.10	ENSMUST00000039631.10	2035	9	3147	2289	3147	-2289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGCTGACAGGATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	34229843	34220778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_34220899_34222311_34222504_34223477_34223640_34224051_34224137_34225823_34225935_34229129_34229259_34229824
ENSMUSG00000035783.10_34220843_34229880_1	chr19	-	791	7	ISM	ENSMUSG00000035783.10	ENSMUST00000039631.10	2035	9	3110	2353	3110	-2353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGACATCAGGAAGGATCT	NA	NA	NA	NA	NA	NA	NA	NA	34229880	34220842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_34220899_34222311_34222504_34223477_34223640_34224051_34224137_34225823_34225935_34229129_34229259_34229824
ENSMUSG00000035783.10_34220880_34229945_1	chr19	-	819	7	ISM	ENSMUSG00000035783.10	ENSMUST00000039631.10	2035	9	3045	2390	3045	-2390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4857	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACGAAACCACCTATAACA	NA	NA	NA	NA	NA	NA	NA	NA	34229945	34220879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_34220899_34222311_34222504_34223477_34223640_34224051_34224137_34225823_34225935_34229129_34229259_34229824
ENSMUSG00000035783.10_34222478_34232766_1	chr19	-	742	7	ISM	ENSMUSG00000035783.10	ENSMUST00000039631.10	2035	9	224	3988	224	-3988	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3089	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGAAGCTGTGCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	34232766	34222477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_34222504_34223477_34223640_34224051_34224137_34225823_34225935_34229129_34229259_34229824_34229977_34232689
ENSMUSG00000035783.10_34222478_34232818_1	chr19	-	794	7	ISM	ENSMUSG00000035783.10	ENSMUST00000039631.10	2035	9	172	3988	172	-3988	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGAAGCTGTGCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	34232818	34222477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_34222504_34223477_34223640_34224051_34224137_34225823_34225935_34229129_34229259_34229824_34229977_34232689
ENSMUSG00000035783.10_34223534_34232889_1	chr19	-	783	6	ISM	ENSMUSG00000035783.10	ENSMUST00000039631.10	2035	9	101	5044	101	-5044	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCGACTACCTCATGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	34232889	34223533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_34223640_34224051_34224137_34225823_34225935_34229129_34229259_34229824_34229977_34232689
ENSMUSG00000035783.10_34224049_34232990_1	chr19	-	781	5	ISM	ENSMUSG00000035783.10	ENSMUST00000039631.10	2035	9	0	5559	0	-5559	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2347	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCCGGGGAGGTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	34232990	34224048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_34224137_34225823_34225935_34229129_34229259_34229824_34229977_34232689
ENSMUSG00000035790.16_31918618_31926503_1	chr16	+	1334	4	FSM	ENSMUSG00000035790.16	ENSMUST00000115168.9	1718	4	0	384	0	-366	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGACTCTATGTGCATTA	NA	NA	NA	NA	NA	NA	NA	NA	31918617	31926503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_31918930_31921784_31921863_31922701_31922866_31925723
ENSMUSG00000035790.16_31921784_31926869_1	chr16	+	1389	3	ISM	ENSMUSG00000035790.16	ENSMUST00000115168.9	1718	4	3166	18	-912	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAAGTGATAAGTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	31921783	31926869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_31921863_31922701_31922866_31925723
ENSMUSG00000035824.8_104954845_104965465_1	chr8	-	553	6	ISM	ENSMUSG00000035824.8	ENST00000417693.8	581	7	4617	-38	4617	38	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2538	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCCAGGTTAGCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	104965465	104954844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104963403_104963478_104965375
ENSMUSG00000035824.8_104954845_104965467_1	chr8	-	549	6	NNC	ENSMUSG00000035824.8	novel	581	7	NA	NA	4615	38	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCCAGGTTAGCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	104965467	104954844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_104954984_104955850_104955926_104957176_104957257_104957791_104957881_104963403_104963478_104965375
ENSMUSG00000035824.8_104955843_104970080_1	chr8	-	480	6	ISM	ENSMUSG00000035824.8	ENST00000417693.8	581	7	2	960	2	-960	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCACTGTCCCTCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	104970080	104955842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_104955926_104957176_104957257_104957791_104957881_104963403_104963478_104965375_104965466_104970016
ENSMUSG00000035828.12_88746389_88749576_1	chr15	+	2074	6	FSM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	0	353	0	-353	multi-exon	TRUE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACCCCCATCCTAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	88746388	88749576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_88746956_88747040_88747151_88747243_88747295_88747381_88747752_88748518_88748696_88748777
ENSMUSG00000035828.12_88746656_88749722_1	chr15	+	1953	6	FSM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	267	207	267	-207	multi-exon	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTGTACAGTCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	88746655	88749722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_88746956_88747040_88747151_88747243_88747295_88747381_88747752_88748518_88748696_88748777
ENSMUSG00000035828.12_88746871_88749929_1	chr15	+	1940	6	NNC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	482	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCTGTTTATTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	88746870	88749929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_88746956_88747040_88747151_88747243_88747290_88747381_88747752_88748518_88748696_88748777
ENSMUSG00000035828.12_88747038_88749929_1	chr15	+	1863	5	ISM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	649	0	649	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCTGTTTATTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	88747037	88749929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88747151_88747243_88747295_88747381_88747752_88748518_88748696_88748777
ENSMUSG00000035851.15_86964804_86983979_1	chr5	+	1902	14	ISM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	12712	539	12381	-534	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGGGGCAGAATGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	86964803	86983979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ENSMUSG00000035851.15_86964970_86984112_1	chr5	+	1869	14	ISM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	12878	406	12547	-401	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAATTTCGCTTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	86964969	86984112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ENSMUSG00000035851.15_86967989_86984390_1	chr5	+	1880	13	ISM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	15897	128	15566	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCCCTTTTAAACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	86967988	86984390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ENSMUSG00000035851.15_86969138_86984518_1	chr5	+	1881	11	ISM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	17046	0	16715	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	86969137	86984518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ENSMUSG00000035863.15_79629501_79656730_1	chr10	+	2395	6	NNC	ENSMUSG00000035863.15	novel	2466	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	79629500	79656730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645310_79645455_79654817
ENSMUSG00000035863.15_79629501_79656730_2	chr10	+	2402	6	FSM	ENSMUSG00000035863.15	ENST00000264560.11	2466	6	65	-1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	79629500	79656730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79654817
ENSMUSG00000035863.15_79629501_79656730_3	chr10	+	2396	6	NNC	ENSMUSG00000035863.15	novel	2466	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	79629500	79656730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_79629575_79642473_79642526_79642867_79642949_79643417_79643543_79645303_79645455_79654817
ENSMUSG00000035863.15_79645311_79656110_1	chr10	+	1591	5	ISM	ENSMUSG00000035863.15	ENSMUST00000046945.13	2651	9	15905	620	15810	-619	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTTGGACCAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	79645310	79656110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79645455_79648176_79648199_79651018_79651076_79652625_79652758_79654874
ENSMUSG00000035863.15_79645395_79656445_1	chr10	+	1710	4	ISM	ENSMUSG00000035863.15	ENSMUST00000105379.3	2519	8	15989	285	15894	-284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCGGGCCCCGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	79645394	79656445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79645455_79648176_79648199_79651018_79651076_79654874
ENSMUSG00000035864.15_108335462_108340392_1	chr10	-	1281	2	ISM	ENSMUSG00000035864.15	ENST00000457153.6	4157	8	186525	1951	186525	-1949	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATAGCTCTCCAGTATCA	NA	NA	NA	NA	NA	NA	NA	NA	108340392	108335461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_108336608_108340257
ENSMUSG00000035864.15_108335687_108463156_1	chr10	-	1216	4	ISM	ENSMUSG00000035864.15	ENST00000457153.6	4157	8	63761	2176	63761	-2174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTCCAGTCAAGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	108463156	108335686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_108336608_108340257_108340392_108419734_108419853_108463113
ENSMUSG00000035864.15_108335754_108463190_1	chr10	-	1183	4	ISM	ENSMUSG00000035864.15	ENST00000457153.6	4157	8	63727	2243	63727	-2241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCAAAGCCACAAACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	108463190	108335753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_108336608_108340257_108340392_108419734_108419853_108463113
ENSMUSG00000035864.15_108335927_108467755_1	chr10	-	1200	5	ISM	ENSMUSG00000035864.15	ENST00000457153.6	4157	8	59162	2416	59162	-2414	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAGTACAGTTAAACCAAC	NA	NA	NA	NA	NA	NA	NA	NA	108467755	108335926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_108336608_108340257_108340392_108419734_108419853_108463113_108463282_108467656
ENSMUSG00000035864.15_108336043_108472427_1	chr10	-	1169	6	ISM	ENSMUSG00000035864.15	ENST00000457153.6	4157	8	54490	2532	54490	-2530	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGATGTTCTATTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	108472427	108336042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_108336608_108340257_108340392_108419734_108419853_108463113_108463282_108467656_108467825_108472411
ENSMUSG00000035864.15_108336170_108478136_1	chr10	-	1202	7	ISM	ENSMUSG00000035864.15	ENST00000457153.6	4157	8	48781	2659	48781	-2657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGAGCATGACTGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	108478136	108336169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_108336608_108340257_108340392_108419734_108419853_108463113_108463282_108467656_108467825_108472411_108472526_108478074
ENSMUSG00000035864.15_108336378_108526807_1	chr10	-	1180	8	FSM	ENSMUSG00000035864.15	ENST00000457153.6	4157	8	110	2867	110	-2865	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCCACATAGTGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	108526807	108336377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_108336608_108340257_108340392_108419734_108419853_108463113_108463282_108467656_108467825_108472411_108472526_108478074_108478260_108526744
ENSMUSG00000035864.15_108336430_108526870_1	chr10	-	1191	8	FSM	ENSMUSG00000035864.15	ENST00000457153.6	4157	8	47	2919	47	-2917	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGCCATGCTGGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	108526870	108336429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_108336608_108340257_108340392_108419734_108419853_108463113_108463282_108467656_108467825_108472411_108472526_108478074_108478260_108526744
ENSMUSG00000035877.18_160612240_160623866_1	chr2	-	1664	2	NNC	ENSMUSG00000035877.18	novel	1979	2	NA	NA	312	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAGACAAAGCAGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	160623866	160612239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_160613543_160623505
ENSMUSG00000035877.18_160612240_160623866_2	chr2	-	1667	2	FSM	ENSMUSG00000035877.18	ENST00000560364.5	1979	2	312	0	312	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAGACAAAGCAGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	160623866	160612239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_160613546_160623505
ENSMUSG00000035877.18_160612367_160623866_1	chr2	-	1540	2	FSM	ENSMUSG00000035877.18	ENST00000560364.5	1979	2	312	127	312	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAAGCCTCATGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	160623866	160612366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_160613546_160623505
ENSMUSG00000035877.18_160612367_160623866_2	chr2	-	1537	2	NNC	ENSMUSG00000035877.18	novel	1979	2	NA	NA	312	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAAGCCTCATGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	160623866	160612366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_160613543_160623505
ENSMUSG00000035877.18_160613467_160624036_1	chr2	-	610	2	FSM	ENSMUSG00000035877.18	ENST00000558993.1	751	2	142	-1	142	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCACATATCATCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	160624036	160613466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_160613546_160623505
ENSMUSG00000035885.6_7192560_7194908_1	chr19	-	435	2	FSM	ENSMUSG00000035885.6	ENSMUST00000039758.6	550	2	73	42	73	-42	multi-exon	FALSE	canonical	NA	NA	NA	NA	5680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTTGTAACAATAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	7194908	7192559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_7192850_7194763
ENSMUSG00000035885.6_7192675_7194923_1	chr19	-	335	2	FSM	ENSMUSG00000035885.6	ENSMUST00000039758.6	550	2	58	157	58	-157	multi-exon	FALSE	canonical	NA	NA	NA	NA	2598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCCGGGATCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	7194923	7192674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_7192850_7194763
ENSMUSG00000035890.10_79594921_79602623_1	chr10	-	897	9	FSM	ENSMUSG00000035890.10	ENST00000569893.1	931	9	34	0	34	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCACCTGGCCATCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	79602623	79594920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597405_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ENSMUSG00000035890.10_79598075_79602744_1	chr10	-	370	4	ISM	ENSMUSG00000035890.10	ENST00000569893.1	931	9	-87	3154	42	-3154	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCTGGAGCCCAGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	79602744	79598074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79598164_79598315_79598380_79598480_79598540_79602586
ENSMUSG00000035901.15_109493632_109498371_1	chr7	-	1036	6	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	61032	-1	61032	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGAGGGGCAAGGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	109498371	109493631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109494023_109495483_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250
ENSMUSG00000035901.15_109493814_109500289_1	chr7	-	1021	8	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	59114	181	59114	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAGAAAGACTCCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	109500289	109493813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109494023_109495483_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266
ENSMUSG00000035901.15_109493857_109500348_1	chr7	-	1037	8	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	59055	224	59055	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGCATTGACATCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	109500348	109493856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109494023_109495483_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266
ENSMUSG00000035901.15_109493969_109504422_1	chr7	-	1011	9	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	54981	336	54981	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGTATGAGGACGTGG	NA	NA	NA	NA	NA	NA	NA	NA	109504422	109493968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109494023_109495483_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376
ENSMUSG00000035901.15_109495587_109504987_1	chr7	-	1022	9	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	54416	1954	54416	-1954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATGACGTAGTTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	109504987	109495586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902
ENSMUSG00000035901.15_109496154_109507565_1	chr7	-	1018	9	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	51838	2521	51838	-2521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGGTCTAGGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	109507565	109496153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537
ENSMUSG00000035901.15_109497773_109513959_1	chr7	-	995	9	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	45444	4140	45444	-4140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTCCCCCAGTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	109513959	109497772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927
ENSMUSG00000035901.15_109497814_109514021_1	chr7	-	1016	9	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	45382	4181	45382	-4181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGAGGTGGATGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	109514021	109497813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927
ENSMUSG00000035901.15_109498931_109516742_1	chr7	-	1097	9	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	42661	5298	42661	-5298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGATATCTGGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	109516742	109498930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591
ENSMUSG00000035901.15_109500309_109517903_1	chr7	-	1012	9	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	41500	6676	41500	-6676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGACTACTTCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	109517903	109500308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800
ENSMUSG00000035901.15_109500360_109517954_1	chr7	-	1012	9	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	41449	6727	41449	-6727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGATGACGAGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	109517954	109500359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800
ENSMUSG00000035901.15_109504461_109518498_1	chr7	-	1010	9	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	40905	10828	40905	-10828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCATGGGTGCGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	109518498	109504460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468
ENSMUSG00000035901.15_109507537_109518684_1	chr7	-	1067	7	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	40719	13904	40719	-13904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCAGTTTGTGCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	109518684	109507536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468
ENSMUSG00000035901.15_109511145_109520450_1	chr7	-	1008	7	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	38953	17512	38953	-17512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGGGCTACAAGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	109520450	109511144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400
ENSMUSG00000035901.15_109511188_109520509_1	chr7	-	1024	7	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	38894	17555	38894	-17555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGATTGCCAGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	109520509	109511187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400
ENSMUSG00000035901.15_109511241_109520557_1	chr7	-	1019	7	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	38846	17608	38846	-17608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCGTGGAGCTGGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	109520557	109511240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400
ENSMUSG00000035901.15_109515470_109526088_1	chr7	-	1017	6	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	33315	21837	33315	-21837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGCAGAAGCAGCACACAG	NA	NA	NA	NA	NA	NA	NA	NA	109526088	109515469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033
ENSMUSG00000035901.15_109516641_109526221_1	chr7	-	1059	5	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	33182	23008	33182	-23008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAAGCTGCAGTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	109526221	109516640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033
ENSMUSG00000035901.15_109517868_109532926_1	chr7	-	997	5	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	26477	24235	26477	-24235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTTCGAACACCTAC	NA	NA	NA	NA	NA	NA	NA	NA	109532926	109517867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819
ENSMUSG00000035901.15_109517912_109532983_1	chr7	-	1010	5	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	26420	24279	26420	-24279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCTCCGGGTCTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	109532983	109517911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819
ENSMUSG00000035901.15_109517967_109533032_1	chr7	-	1004	5	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	26371	24334	26371	-24334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATCTTTTATTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	109533032	109517966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819
ENSMUSG00000035901.15_109518499_109533139_1	chr7	-	1012	4	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	26264	24866	26264	-24866	internal_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGGGAACAGATGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	109533139	109518498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109518685_109520400_109520719_109526033_109526222_109532819
ENSMUSG00000035901.15_109518551_109533190_1	chr7	-	1011	4	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	26213	24918	26213	-24918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGAAGTGTTTGTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	109533190	109518550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109518685_109520400_109520719_109526033_109526222_109532819
ENSMUSG00000035901.15_109518607_109533263_1	chr7	-	1028	4	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	26140	24974	26140	-24974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAACATTCAAATCCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	109533263	109518606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109518685_109520400_109520719_109526033_109526222_109532819
ENSMUSG00000035901.15_109520471_109533377_1	chr7	-	994	3	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	26026	26838	26026	-26838	internal_fragment	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTCAAGGAAAATGAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	109533377	109520470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109520719_109526033_109526222_109532819
ENSMUSG00000035901.15_109520687_109534760_1	chr7	-	1060	5	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	24643	27054	24643	-27054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGAGTTGCCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	109534760	109520686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688
ENSMUSG00000035901.15_109526109_109559343_1	chr7	-	1016	5	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	60	32476	60	-32476	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTGTACCATACCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	109559343	109526108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ENSMUSG00000035901.15_109526164_109559390_1	chr7	-	1008	5	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	13	32531	13	-32531	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCAGCATGTCTATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	109559390	109526163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ENSMUSG00000035914.12_58432396_58437914_1	chr9	-	1363	4	ISM	ENSMUSG00000035914.12	ENSMUST00000039788.11	3186	7	10310	813	10310	-813	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAAACAAGTATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	58437914	58432395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878
ENSMUSG00000035914.12_58432458_58437980_1	chr9	-	1367	4	ISM	ENSMUSG00000035914.12	ENSMUST00000039788.11	3186	7	10244	875	10244	-875	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCGTCAGCTCTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	58437980	58432457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878
ENSMUSG00000035914.12_58432633_58442889_1	chr9	-	1376	5	ISM	ENSMUSG00000035914.12	ENSMUST00000039788.11	3186	7	5335	1050	5335	-1050	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATTCTATCCTGACTAA	NA	NA	NA	NA	NA	NA	NA	NA	58442889	58432632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738
ENSMUSG00000035914.12_58432720_58442962_1	chr9	-	1362	5	ISM	ENSMUSG00000035914.12	ENSMUST00000039788.11	3186	7	5262	1137	5262	-1137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCACAGACCTGCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	58442962	58432719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738
ENSMUSG00000035914.12_58432921_58444754_1	chr9	-	1437	6	ISM	ENSMUSG00000035914.12	ENSMUST00000039788.11	3186	7	3470	1338	3470	-1338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATACTTGCCTTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	58444754	58432920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551
ENSMUSG00000035914.12_58433408_58448224_1	chr9	-	1361	7	FSM	ENSMUSG00000035914.12	ENSMUST00000039788.11	3186	7	0	1825	0	-1825	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCGGCCTTATTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	58448224	58433407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444891_58447949
ENSMUSG00000035914.12_58433560_58462508_1	chr9	-	1412	8	FSM	ENSMUSG00000035914.12	ENSMUST00000165365.3	3603	8	212	1979	212	-1977	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCCTTCCCCCAACGAAT	NA	NA	NA	NA	NA	NA	NA	NA	58462508	58433559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444891_58447949_58448224_58462304
ENSMUSG00000035919.17_22408045_22723713_1	chr9	+	2225	18	ISM	ENSMUSG00000035919.17	ENSMUST00000147712.8	3495	22	21018	75857	5920	-75857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACATACCCAAAGATACC	NA	NA	NA	NA	NA	NA	NA	NA	22408044	22723713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616
ENSMUSG00000035936.7_25093060_25121644_1	chr13	-	4149	10	FSM	ENSMUSG00000035936.7	ENSMUST00000037615.7	5647	10	0	1498	0	-1498	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAATGTGAACTCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	25121644	25093059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_25095750_25096230_25096290_25097726_25097897_25099744_25099904_25102483_25102628_25103661_25103806_25107949_25108067_25109960_25110132_25111523_25111608_25121233
ENSMUSG00000035941.16_85569984_85572818_1	chr9	-	789	3	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	58404	0	58404	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGAGATGTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	85572818	85569983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85570568_85572261_85572395_85572746
ENSMUSG00000035941.16_85570236_85585173_1	chr9	-	790	5	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	46049	252	46049	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATGTGTCAGGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	85585173	85570235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067
ENSMUSG00000035941.16_85570361_85588532_1	chr9	-	832	7	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	42690	377	42690	-377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATTTGTTAGCACATTG	NA	NA	NA	NA	NA	NA	NA	NA	85588532	85570360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496
ENSMUSG00000035941.16_85570450_85588574_1	chr9	-	785	7	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	42648	466	42648	-466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGGCTGCTAGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	85588574	85570449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496
ENSMUSG00000035941.16_85570492_85588642_1	chr9	-	811	7	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	42580	508	42580	-508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGCACCACAGGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	85588642	85570491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496
ENSMUSG00000035941.16_85572321_85590166_1	chr9	-	781	7	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	41056	2337	41056	-2337	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGCAACAAGAAGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	85590166	85572320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076
ENSMUSG00000035941.16_85579238_85595724_1	chr9	-	816	7	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	35498	9254	35498	-9254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAGATCATGTCAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	85595724	85579237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649
ENSMUSG00000035941.16_85579302_85595763_1	chr9	-	791	7	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	35459	9318	35459	-9318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATCCAGGTCATTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	85595763	85579301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649
ENSMUSG00000035941.16_85585157_85597386_1	chr9	-	789	8	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	33836	15173	33836	-15173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGACCACCAAAGAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	85597386	85585156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351
ENSMUSG00000035941.16_85588592_85600473_1	chr9	-	791	8	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	30749	18608	30749	-18608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAATCACCAACAACTAA	NA	NA	NA	NA	NA	NA	NA	NA	85600473	85588591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413
ENSMUSG00000035941.16_85590076_85601149_1	chr9	-	880	8	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	30073	20092	30073	-20092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTGCAAGCCTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	85601149	85590075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600544_85601065
ENSMUSG00000035941.16_85592507_85604379_1	chr9	-	790	9	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	26843	22523	26843	-22523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGCCACGGAAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	85604379	85592506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600544_85601065_85601149_85601915_85602003_85604327
ENSMUSG00000035941.16_85595649_85604504_1	chr9	-	881	8	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	26718	25665	26718	-25665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTCTATTGTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	85604504	85595648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600544_85601065_85601149_85601915_85602003_85604327
ENSMUSG00000035941.16_85596263_85606162_1	chr9	-	797	8	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	25060	26279	25060	-26279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCATATTCTACAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	85606162	85596262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85596302_85597351_85597470_85599603_85599706_85600413_85600544_85601065_85601149_85601915_85602003_85604327_85604503_85606099
ENSMUSG00000035941.16_85597350_85606278_1	chr9	-	876	7	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	24944	27366	24944	-27366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGGGTGTCTCTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	85606278	85597349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85597470_85599603_85599706_85600413_85600544_85601065_85601149_85601915_85602003_85604327_85604503_85606099
ENSMUSG00000035941.16_85599604_85608786_1	chr9	-	879	7	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	22436	29620	22436	-29620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTACTTTAAGAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	85608786	85599603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85599706_85600413_85600544_85601065_85601149_85601915_85602003_85604327_85604503_85606099_85606278_85608662
ENSMUSG00000035941.16_85600423_85610487_1	chr9	-	797	7	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	20735	30439	20735	-30439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATAAAAGGTAATGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	85610487	85600422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85600544_85601065_85601149_85601915_85602003_85604327_85604503_85606099_85606278_85608662_85608787_85610458
ENSMUSG00000035941.16_85600486_85610534_1	chr9	-	781	7	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	20688	30502	20688	-30502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAATCCAGTCTGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	85610534	85600485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85600544_85601065_85601149_85601915_85602003_85604327_85604503_85606099_85606278_85608662_85608787_85610458
ENSMUSG00000035941.16_85600513_85610623_1	chr9	-	843	7	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	20599	30529	20599	-30529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTCCAGCTGTGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	85610623	85600512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85600544_85601065_85601149_85601915_85602003_85604327_85604503_85606099_85606278_85608662_85608787_85610458
ENSMUSG00000035941.16_85601916_85610848_1	chr9	-	865	6	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	20374	31932	20374	-31932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTAGTAAATGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	85610848	85601915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85602003_85604327_85604503_85606099_85606278_85608662_85608787_85610458_85610640_85610728
ENSMUSG00000035941.16_85604339_85613153_1	chr9	-	785	6	ISM	ENSMUSG00000035941.16	ENSMUST00000039213.15	5650	29	18234	34926	18069	-34355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAAACAAGGTATAATTG	NA	NA	NA	NA	NA	NA	NA	NA	85613153	85604338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136
ENSMUSG00000035941.16_85604384_85613288_1	chr9	-	875	6	ISM	ENSMUSG00000035941.16	ENSMUST00000039213.15	5650	29	18099	34971	17934	-34400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAGATCCAAGTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	85613288	85604383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136
ENSMUSG00000035941.16_85604443_85613288_1	chr9	-	816	6	ISM	ENSMUSG00000035941.16	ENSMUST00000039213.15	5650	29	18099	35030	17934	-34459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGTATGAAAGAATTCGA	NA	NA	NA	NA	NA	NA	NA	NA	85613288	85604442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136
ENSMUSG00000035941.16_85606100_85614794_1	chr9	-	883	6	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	16428	36116	16428	-36116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTTAGTATGACTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	85614794	85606099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683
ENSMUSG00000035941.16_85606230_85617057_1	chr9	-	783	7	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	14165	36246	14165	-36246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATCCTCGCCAGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	85617057	85606229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027
ENSMUSG00000035941.16_85608743_85619558_1	chr9	-	788	7	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	11664	38759	11664	-38759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAAGGTTGATCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	85619558	85608742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520
ENSMUSG00000035941.16_85610552_85625491_1	chr9	-	774	7	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	5731	40568	5731	-40568	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGCTGCAAGTGATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	85625491	85610551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427
ENSMUSG00000035941.16_85610603_85625546_1	chr9	-	778	7	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	5676	40619	5676	-40619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTCGCCAAGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	85625546	85610602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427
ENSMUSG00000035941.16_85613137_85625771_1	chr9	-	848	5	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	5451	43153	5451	-43153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTTTTGTTTTTAACC	NA	NA	NA	NA	NA	NA	NA	NA	85625771	85613136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427
ENSMUSG00000035941.16_85614692_85625940_1	chr9	-	838	4	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	5282	44708	5282	-44708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTTGGTAATTGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	85625940	85614691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_85614795_85617027_85617153_85619520_85619618_85625427
ENSMUSG00000035949.16_34695351_34712932_1	chr2	-	1604	6	NNC	ENSMUSG00000035949.16	novel	1838	8	NA	NA	261	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTGTTCTTTGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	34712932	34695350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703016_34712569
ENSMUSG00000035949.16_34695351_34712932_2	chr2	-	1610	6	FSM	ENSMUSG00000035949.16	ENSMUST00000113078.8	1872	6	261	1	261	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTGTTCTTTGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	34712932	34695350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569
ENSMUSG00000035949.16_34695632_34716034_1	chr2	-	1537	7	FSM	ENSMUSG00000035949.16	ENSMUST00000028220.10	2030	7	51	442	49	-279	multi-exon	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCACCTAAAGGTATCAT	NA	NA	NA	NA	NA	NA	NA	NA	34716034	34695631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973
ENSMUSG00000035949.16_34695734_34716213_1	chr2	-	1513	8	FSM	ENSMUSG00000035949.16	ENSMUST00000113080.9	1923	8	29	381	0	-381	multi-exon	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTGCTGACACCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	34716213	34695733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
ENSMUSG00000035949.16_34696908_34702985_1	chr2	-	932	4	ISM	ENSMUSG00000035949.16	ENSMUST00000113078.8	1872	6	10208	1558	10208	-643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCAGTGGTCTTAGACC	NA	NA	NA	NA	NA	NA	NA	NA	34702985	34696907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34697460_34698525_34698613_34700994_34701129_34702826
ENSMUSG00000035953.15_51164674_51167781_1	chr14	-	1263	5	ISM	ENSMUSG00000035953.15	ENSMUST00000162957.8	1465	6	488	2	488	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCCCACTTAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	51167781	51164673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_51165495_51166277_51166369_51166462_51166516_51167040_51167148_51167590
ENSMUSG00000035953.15_51164775_51168138_1	chr14	-	1231	6	FSM	ENSMUSG00000035953.15	ENSMUST00000162957.8	1465	6	131	103	131	-103	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTCCAGTTGCAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	51168138	51164774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51167040_51167148_51167590_51167782_51168069
ENSMUSG00000035953.15_51164839_51168260_1	chr14	-	1289	6	FSM	ENSMUSG00000035953.15	ENSMUST00000162957.8	1465	6	9	167	9	-167	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACTATTTAATATGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	51168260	51164838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51167040_51167148_51167590_51167782_51168069
ENSMUSG00000035953.15_51164864_51167220_1	chr14	-	1061	5	ISM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	1093	192	1049	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAGGAACTGATGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	51167220	51164863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040
ENSMUSG00000035953.15_51164884_51168269_1	chr14	-	1253	6	FSM	ENSMUSG00000035953.15	ENSMUST00000162957.8	1465	6	0	212	0	-212	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACTGCTCTGTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	51168269	51164883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51167040_51167148_51167590_51167782_51168069
ENSMUSG00000035953.15_51164985_51167694_1	chr14	-	971	6	ISM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	619	313	575	-313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTAGGACCTTGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	51167694	51164984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590
ENSMUSG00000035953.15_51165074_51167720_1	chr14	-	908	6	ISM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	593	402	549	-402	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCCCGAGAACCATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	51167720	51165073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590
ENSMUSG00000035953.15_51165119_51167781_1	chr14	-	924	6	ISM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	532	447	488	-447	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTGGATCCTAAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	51167781	51165118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590
ENSMUSG00000035953.15_51165323_51168260_1	chr14	-	911	7	FSM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	46	1798	9	-651	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCTGGTACCAACAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	51168260	51165322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
ENSMUSG00000035954.11_40798026_40894625_1	chr12	+	3223	28	ISM	ENSMUSG00000035954.11	ENST00000437633.6	8394	52	301944	2248	301691	-1554	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCCAGGCCCCTGCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	40798025	40894625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_40798114_40805765_40805865_40816237_40816333_40827188_40827265_40829121_40829223_40829644_40829704_40838226_40838376_40840074_40840161_40844766_40844863_40845635_40845697_40849655_40849750_40856847_40856997_40860443_40860531_40862218_40862324_40866188_40866331_40867587_40867755_40870590_40870678_40878778_40878956_40879610_40879695_40882212_40882333_40882641_40882764_40883113_40883235_40884374_40884457_40884619_40884730_40886628_40886702_40888439_40888554_40891235_40891298_40894208
ENSMUSG00000035954.11_40866207_40896003_1	chr12	+	3238	14	ISM	ENSMUSG00000035954.11	ENST00000437633.6	8394	52	370125	870	369872	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTTTGTTGCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	40866206	40896003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_40866331_40867587_40867755_40870590_40870678_40878778_40878956_40879610_40879695_40882212_40882333_40882641_40882764_40883113_40883235_40884374_40884457_40884619_40884730_40886628_40886702_40888439_40888554_40891235_40891298_40894208
ENSMUSG00000035958.4_25015679_25024485_1	chr13	+	817	6	ISM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	17	1651	4	-1651	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGATTCAACCACGGTT	NA	NA	NA	NA	NA	NA	NA	NA	25015678	25024485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_25015913_25015992_25016079_25019998_25020170_25020837_25020930_25022129_25022249_25024370
ENSMUSG00000035958.4_25015805_25025138_1	chr13	+	816	7	FSM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	143	998	130	-998	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAGTATACATGGGATAC	NA	NA	NA	NA	NA	NA	NA	NA	25015804	25025138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_25015913_25015992_25016079_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ENSMUSG00000035958.4_25020099_25025385_1	chr13	+	769	5	ISM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	4437	751	4424	-751	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAATTTGTGTAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	25020098	25025385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ENSMUSG00000035958.4_25020870_25025491_1	chr13	+	772	4	ISM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	5208	645	5195	-645	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTGTGTCCTCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	25020869	25025491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_25020930_25022129_25022249_25024370_25024542_25025069
ENSMUSG00000035958.4_25024396_25025681_1	chr13	+	758	2	ISM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	8734	455	8721	-455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATCATTTTATTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	25024395	25025681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_25024542_25025069
ENSMUSG00000035958.4_25024460_25025788_1	chr13	+	801	2	ISM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	8798	348	8785	-348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAGTAGATGACAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	25024459	25025788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_25024542_25025069
ENSMUSG00000035958.4_25024465_25025839_1	chr13	+	847	2	ISM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	8803	297	8790	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATATAGTGACTGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	25024464	25025839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_25024542_25025069
ENSMUSG00000035960.15_51162426_51163724_1	chr14	+	468	4	ISM	ENSMUSG00000035960.15	ENSMUST00000049411.12	1239	5	1	872	1	-872	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTCAGCTCCGTCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	51162425	51163724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_51162487_51162669_51162782_51162973_51163162_51163617
ENSMUSG00000035960.15_51162973_51164008_1	chr14	+	478	3	ISM	ENSMUSG00000035960.15	ENSMUST00000049411.12	1239	5	548	588	548	-588	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAAGACTGGAATACCGA	NA	NA	NA	NA	NA	NA	NA	NA	51162972	51164008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_51163162_51163617_51163811_51163912
ENSMUSG00000035960.15_51163715_51164242_1	chr14	+	426	2	ISM	ENSMUSG00000035960.15	ENSMUST00000049411.12	1239	5	1290	354	1290	-354	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCAACACTGCTTACGCT	NA	NA	NA	NA	NA	NA	NA	NA	51163714	51164242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_51163811_51163912
ENSMUSG00000035967.16_55500245_55539513_1	chrX	+	1629	11	FSM	ENSMUSG00000035967.16	ENSMUST00000101553.9	3201	11	5	1567	0	-1567	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGGAGCTCCAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	55500244	55539513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492
ENSMUSG00000035967.16_55500389_55539556_1	chrX	+	1528	11	FSM	ENSMUSG00000035967.16	ENSMUST00000101553.9	3201	11	149	1524	144	-1524	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAGTTACAGTGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	55500388	55539556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492
ENSMUSG00000035967.16_55500511_55541967_1	chrX	+	1545	12	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	271	11224	266	887	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACCCTTGGCTCACAATA	NA	NA	NA	NA	NA	NA	NA	NA	55500510	55541967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875
ENSMUSG00000035967.16_55500580_55542025_1	chrX	+	1534	12	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	340	11166	335	945	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCACCAAGGCTCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	55500579	55542025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875
ENSMUSG00000035967.16_55500640_55542085_1	chrX	+	1534	12	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	400	11106	395	1005	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACAAGGTAGGTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	55500639	55542085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875
ENSMUSG00000035967.16_55500835_55543305_1	chrX	+	1565	12	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	595	9886	590	2225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCAGACTCGGAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	55500834	55543305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220
ENSMUSG00000035967.16_55524994_55544945_1	chrX	+	1566	12	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	24754	8246	24749	3865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGCACAAATGGGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	55524993	55544945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927
ENSMUSG00000035967.16_55525075_55545000_1	chrX	+	1540	12	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	24835	8191	24830	3920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAGAGCTCGATCCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	55525074	55545000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927
ENSMUSG00000035967.16_55525974_55547055_1	chrX	+	1537	12	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	25734	6136	25729	5975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGGCCACAAAACAAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	55525973	55547055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020
ENSMUSG00000035967.16_55526329_55547187_1	chrX	+	1543	11	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	26089	6004	26084	-6004	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACCACTCTCAGCCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	55526328	55547187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020
ENSMUSG00000035967.16_55526376_55547252_1	chrX	+	1561	11	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	26136	5939	26131	-5939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTATAGAGTAGTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	55526375	55547252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020
ENSMUSG00000035967.16_55526712_55550143_1	chrX	+	1539	11	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	26472	3048	26467	-3048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTTCTTATTAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	55526711	55550143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084
ENSMUSG00000035967.16_55526769_55550211_1	chrX	+	1550	11	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	26529	2980	26524	-2980	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTGGATTCTCTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	55526768	55550211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084
ENSMUSG00000035967.16_55529178_55550338_1	chrX	+	1592	10	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	28938	2853	28933	-2853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGCATCTGCTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	55529177	55550338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084
ENSMUSG00000035967.16_55530699_55551777_1	chrX	+	1533	10	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	30459	1414	30454	-1414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGACGAAGAAACAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	55530698	55551777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732
ENSMUSG00000035967.16_55534408_55552301_1	chrX	+	1549	10	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	34168	890	34163	-890	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTTAACAATGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	55534407	55552301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ENSMUSG00000035967.16_55534437_55552400_1	chrX	+	1619	10	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	34197	791	34192	-791	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACGTTACTGAAGCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	55534436	55552400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ENSMUSG00000035967.16_55541938_55552658_1	chrX	+	1547	7	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	41698	533	41693	-533	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCAGAGTGAATAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	55541937	55552658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ENSMUSG00000035967.16_55543219_55552772_1	chrX	+	1506	6	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	42979	419	42974	-419	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTCTTCAAAGATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	55543218	55552772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ENSMUSG00000035967.16_55543249_55552859_1	chrX	+	1563	6	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	43009	332	43004	-332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTAATTCTCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	55543248	55552859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ENSMUSG00000035967.16_55543308_55552902_1	chrX	+	1547	6	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	43068	289	43063	-289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTACCTCGAGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	55543307	55552902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ENSMUSG00000035967.16_55544981_55553045_1	chrX	+	1600	5	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	44741	146	44736	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAGGAAAAATAATATGT	NA	NA	NA	NA	NA	NA	NA	NA	55544980	55553045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ENSMUSG00000035967.16_55545028_55553055_1	chrX	+	1563	5	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	44788	136	44783	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATATGTATATTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	55545027	55553055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ENSMUSG00000035983.5_40273164_40275243_1	chr12	+	965	2	FSM	ENSMUSG00000035983.5	ENSMUST00000038121.5	1366	2	407	-6	-199	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCGCAATTTATGTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	40273163	40275243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_40273553_40274667
ENSMUSG00000036023.7_51045382_51057245_1	chr14	+	1219	12	ISM	ENSMUSG00000036023.7	ENSMUST00000036126.7	1894	16	84	1513	84	-1513	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGTCCACTCTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	51045381	51057245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117
ENSMUSG00000036023.7_51047602_51057957_1	chr14	+	1208	13	ISM	ENSMUSG00000036023.7	ENSMUST00000036126.7	1894	16	2304	801	2304	-801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATGTCCTCCAAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	51047601	51057957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934
ENSMUSG00000036023.7_51047984_51058267_1	chr14	+	1203	13	ISM	ENSMUSG00000036023.7	ENSMUST00000036126.7	1894	16	2686	491	2686	-491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGAACTACTGGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	51047983	51058267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251
ENSMUSG00000036023.7_51049231_51058376_1	chr14	+	1270	12	ISM	ENSMUSG00000036023.7	ENSMUST00000036126.7	1894	16	3933	382	3933	-382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTACCCCGAGCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	51049230	51058376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251
ENSMUSG00000036023.7_51052327_51058519_1	chr14	+	1245	12	ISM	ENSMUSG00000036023.7	ENSMUST00000036126.7	1894	16	7029	239	7029	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTGACACAGGAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	51052326	51058519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ENSMUSG00000036023.7_51053676_51058757_1	chr14	+	1288	10	ISM	ENSMUSG00000036023.7	ENSMUST00000036126.7	1894	16	8378	1	8378	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	51053675	51058757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ENSMUSG00000036023.7_51053733_51058757_1	chr14	+	1231	10	ISM	ENSMUSG00000036023.7	ENSMUST00000036126.7	1894	16	8435	1	8435	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	51053732	51058757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ENSMUSG00000036026.16_45971433_45972480_1	chr17	-	656	3	ISM	ENSMUSG00000036026.16	ENSMUST00000113523.9	3284	24	24705	336	24705	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAGGAAAGGGTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	45972480	45971432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45971907_45972148_45972230_45972379
ENSMUSG00000036026.16_45971550_45972741_1	chr17	-	613	4	ISM	ENSMUSG00000036026.16	ENSMUST00000113523.9	3284	24	24444	453	24444	-453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGGAGGGAGAGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	45972741	45971549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682
ENSMUSG00000036026.16_45972704_45976146_1	chr17	-	625	6	ISM	ENSMUSG00000036026.16	ENSMUST00000113523.9	3284	24	21039	1607	21039	-1607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCCACCATGCGCACG	NA	NA	NA	NA	NA	NA	NA	NA	45976146	45972703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090
ENSMUSG00000036026.16_45975671_45977571_1	chr17	-	619	6	ISM	ENSMUSG00000036026.16	ENSMUST00000113523.9	3284	24	19614	4574	19614	-4574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGTGACCAGGAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	45977571	45975670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503
ENSMUSG00000036026.16_45976096_45978731_1	chr17	-	639	5	ISM	ENSMUSG00000036026.16	ENSMUST00000113523.9	3284	24	18454	4999	18454	-4999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCGGTGAGCTGCCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	45978731	45976095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620
ENSMUSG00000036026.16_45984675_45990547_1	chr17	-	626	8	ISM	ENSMUSG00000036026.16	ENSMUST00000113523.9	3284	24	6638	13578	6638	-13578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGAAGATGATCTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	45990547	45984674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457
ENSMUSG00000036030.10_72716776_72764256_1	chr9	+	1613	9	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	48	58373	48	-58373	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACAGTGTCTATCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	72716775	72764256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72717040_72749976_72750122_72752139_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056
ENSMUSG00000036030.10_72716923_72766076_1	chr9	+	1606	10	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	195	56553	195	-56553	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGTACTACCATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	72716922	72766076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72717040_72749976_72750122_72752139_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042
ENSMUSG00000036030.10_72716974_72766129_1	chr9	+	1608	10	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	246	56500	246	-56500	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTCGGGGCTACAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	72716973	72766129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72717040_72749976_72750122_72752139_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042
ENSMUSG00000036030.10_72717020_72766190_1	chr9	+	1623	10	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	292	56439	292	-56439	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGACACCGGTGACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	72717019	72766190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72717040_72749976_72750122_72752139_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042
ENSMUSG00000036030.10_72750060_72798090_1	chr9	+	1593	10	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	33332	24539	33332	-24539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTACAACAACATGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	72750059	72798090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72750122_72752139_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058
ENSMUSG00000036030.10_72752145_72799118_1	chr9	+	1618	10	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	35417	23511	35417	-23511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCCACCCCACCATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	72752144	72799118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090
ENSMUSG00000036030.10_72752199_72799167_1	chr9	+	1613	10	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	35471	23462	35471	-23462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCACTGGAGGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	72752198	72799167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090
ENSMUSG00000036030.10_72755277_72799579_1	chr9	+	1632	10	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	38549	23050	38549	-23050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATCAGCTGTCCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	72755276	72799579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509
ENSMUSG00000036030.10_72755691_72801159_1	chr9	+	1597	10	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	38963	21470	38963	-21470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTTTCCTGGAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	72755690	72801159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105
ENSMUSG00000036030.10_72757114_72812047_1	chr9	+	1631	10	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	40386	10582	40386	-10582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCGTCCAACGAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	72757113	72812047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986
ENSMUSG00000036030.10_72758903_72813502_1	chr9	+	1606	10	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	42175	9127	42175	-9127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATCCTCATCTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	72758902	72813502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429
ENSMUSG00000036030.10_72758963_72813550_1	chr9	+	1594	10	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	42235	9079	42235	-9079	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTTCCCTGGTCGTAG	NA	NA	NA	NA	NA	NA	NA	NA	72758962	72813550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429
ENSMUSG00000036030.10_72762374_72817961_1	chr9	+	1616	11	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	45646	4668	45646	-4668	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAACACTAAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	72762373	72817961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918
ENSMUSG00000036030.10_72764153_72819273_1	chr9	+	1641	11	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	47425	3356	47425	-3356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGACCGCCAGCTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	72764152	72819273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ENSMUSG00000036030.10_72764232_72819315_1	chr9	+	1604	11	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	47504	3314	47504	-3314	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACACAGAGCATTCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	72764231	72819315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ENSMUSG00000036030.10_72764287_72819364_1	chr9	+	1598	11	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	47559	3265	47559	-3265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGAAGGTTTTCCCATG	NA	NA	NA	NA	NA	NA	NA	NA	72764286	72819364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ENSMUSG00000036030.10_72766072_72819587_1	chr9	+	1716	10	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	49344	3042	49344	-3042	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACGCTCAGGGATTCACA	NA	NA	NA	NA	NA	NA	NA	NA	72766071	72819587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ENSMUSG00000036030.10_72799126_72819757_1	chr9	+	1595	8	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	82398	2872	82398	-2872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAACAATGTGAAAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	72799125	72819757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ENSMUSG00000036030.10_72799149_72819837_1	chr9	+	1652	8	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	82421	2792	82421	-2792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTCTGCTGAATAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	72799148	72819837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ENSMUSG00000036030.10_72799548_72819957_1	chr9	+	1605	7	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	82820	2672	82820	-2672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCCATTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	72799547	72819957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ENSMUSG00000036030.10_72799580_72820031_1	chr9	+	1647	7	ISM	ENSMUSG00000036030.10	ENST00000389286.9	5440	20	82852	2598	82852	-2598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGATTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	72799579	72820031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ENSMUSG00000036030.10_72801202_72821276_1	chr9	+	1627	7	NNC	ENSMUSG00000036030.10	novel	5440	20	NA	NA	84474	-1353	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATACTACCTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	72801201	72821276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185_72820088_72821198
ENSMUSG00000036030.10_72801246_72821339_1	chr9	+	1646	7	NNC	ENSMUSG00000036030.10	novel	5440	20	NA	NA	84518	-1290	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTTACTCTTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	72801245	72821339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185_72820088_72821198
ENSMUSG00000036030.10_72812121_72821457_1	chr9	+	1597	6	NNC	ENSMUSG00000036030.10	novel	9148	20	NA	NA	95393	-1172	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGGGATCACAAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	72812120	72821457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185_72820088_72821200
ENSMUSG00000036030.10_72813466_72821554_1	chr9	+	1611	5	NNC	ENSMUSG00000036030.10	novel	5440	20	NA	NA	96738	-1075	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCTGGGACAGGACATT	NA	NA	NA	NA	NA	NA	NA	NA	72813465	72821554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_72813551_72814982_72815146_72817918_72818024_72819185_72820088_72821198
ENSMUSG00000036030.10_72813520_72821607_1	chr9	+	1610	5	NNC	ENSMUSG00000036030.10	novel	5440	20	NA	NA	96792	-1022	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTTAGTTATGATAGGT	NA	NA	NA	NA	NA	NA	NA	NA	72813519	72821607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_72813551_72814982_72815146_72817918_72818024_72819185_72820088_72821198
ENSMUSG00000036030.10_72815077_72821744_1	chr9	+	1622	4	NNC	ENSMUSG00000036030.10	novel	5440	20	NA	NA	98349	-885	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATTCACTAGAAACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	72815076	72821744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_72815146_72817918_72818024_72819185_72820088_72821198
ENSMUSG00000036030.10_72817909_72821886_1	chr9	+	1705	3	NNC	ENSMUSG00000036030.10	novel	5440	20	NA	NA	101181	-743	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCCAGCATATGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	72817908	72821886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_72818024_72819185_72820088_72821198
ENSMUSG00000036030.10_72819421_72822169_1	chr9	+	1638	2	NNC	ENSMUSG00000036030.10	novel	5440	20	NA	NA	102693	-460	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGTATTCAACTCCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	72819420	72822169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_72820088_72821198
ENSMUSG00000036030.10_72819492_72822204_1	chr9	+	1602	2	NNC	ENSMUSG00000036030.10	novel	5440	20	NA	NA	102764	-425	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTGTTTCATTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	72819491	72822204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_72820088_72821198
ENSMUSG00000036030.10_72819915_72822621_1	chr9	+	1596	2	NNC	ENSMUSG00000036030.10	novel	5440	20	NA	NA	103187	-8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGAACCTCTCCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	72819914	72822621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_72820088_72821198
ENSMUSG00000036054.16_70687088_70713229_1	chr8	+	3424	10	FSM	ENSMUSG00000036054.16	ENSMUST00000164403.8	4099	10	212	463	205	-463	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAAATAGGTGTGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	70687087	70713229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118
ENSMUSG00000036057.12_110214289_110215717_1	chr9	-	1066	5	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	21544	0	21544	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCATCCCTGCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	110215717	110214288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521
ENSMUSG00000036057.12_110214392_110215879_1	chr9	-	1033	6	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	21382	103	21382	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGGCTGCCCAGCCTACG	NA	NA	NA	NA	NA	NA	NA	NA	110215879	110214391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798
ENSMUSG00000036057.12_110214504_110216056_1	chr9	-	1098	6	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	21205	215	21205	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGCTGTTGGCCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	110216056	110214503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798
ENSMUSG00000036057.12_110214658_110216225_1	chr9	-	1113	6	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	21036	369	21036	-369	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCAGGTCTTCCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	110216225	110214657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798
ENSMUSG00000036057.12_110214908_110216409_1	chr9	-	1128	5	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	20852	619	20852	-619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAGTGTGAACATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	110216409	110214907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798
ENSMUSG00000036057.12_110214908_110216476_1	chr9	-	1195	5	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	20785	619	20785	-619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAGTGTGAACATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	110216476	110214907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798
ENSMUSG00000036057.12_110215342_110216670_1	chr9	-	1133	3	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	20591	1053	20591	-1053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCACACACCTATTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	110216670	110215341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110215418_110215521_110215707_110215798
ENSMUSG00000036057.12_110215392_110216754_1	chr9	-	1167	3	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	20507	1103	20507	-1103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCGCTTCATCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	110216754	110215391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110215418_110215521_110215707_110215798
ENSMUSG00000036057.12_110215889_110217162_1	chr9	-	1112	3	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	20099	1600	20099	-1600	internal_fragment	TRUE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCACAGCTGCAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	110217162	110215888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110216825_110216920_110217047_110217112
ENSMUSG00000036057.12_110215947_110217222_1	chr9	-	1114	3	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	20039	1658	20039	-1658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGGAGGGGCTCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	110217222	110215946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110216825_110216920_110217047_110217112
ENSMUSG00000036057.12_110216512_110217895_1	chr9	-	1133	4	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	19366	2223	19366	-2223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGGTCCTCAGGCAACC	NA	NA	NA	NA	NA	NA	NA	NA	110217895	110216511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110216825_110216920_110217047_110217112_110217720_110217808
ENSMUSG00000036057.12_110216712_110218176_1	chr9	-	1123	5	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	19085	2423	19085	-2423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCACCACCAACACCCT	NA	NA	NA	NA	NA	NA	NA	NA	110218176	110216711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110216825_110216920_110217047_110217112_110217720_110217808_110217989_110218079
ENSMUSG00000036057.12_110216780_110218233_1	chr9	-	1112	5	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	19028	2491	19028	-2491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACACAACAGCCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	110218233	110216779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110216825_110216920_110217047_110217112_110217720_110217808_110217989_110218079
ENSMUSG00000036057.12_110216923_110218362_1	chr9	-	1117	5	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	18899	2634	18899	-2634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCAGGCCCAGCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	110218362	110216922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110217047_110217112_110217720_110217808_110217989_110218079_110218232_110218308
ENSMUSG00000036057.12_110216975_110218417_1	chr9	-	1120	5	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	18844	2686	18844	-2686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTCCTCCTGGGATCCC	NA	NA	NA	NA	NA	NA	NA	NA	110218417	110216974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110217047_110217112_110217720_110217808_110217989_110218079_110218232_110218308
ENSMUSG00000036057.12_110217177_110218651_1	chr9	-	1141	5	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	18610	2888	18610	-2888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGGCACCACGGCCAAACC	NA	NA	NA	NA	NA	NA	NA	NA	110218651	110217176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540
ENSMUSG00000036057.12_110217252_110218699_1	chr9	-	1114	5	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	18562	2963	18562	-2963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACCCGAGTTAGCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	110218699	110217251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540
ENSMUSG00000036057.12_110217432_110219132_1	chr9	-	1115	6	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	18129	3143	18129	-3143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGCTGCAGTTCCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	110219132	110217431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110
ENSMUSG00000036057.12_110217468_110219215_1	chr9	-	1162	6	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	18046	3179	18046	-3179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTTATTCAGGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	110219215	110217467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110
ENSMUSG00000036057.12_110217669_110219748_1	chr9	-	1119	8	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	17513	3380	17513	-3380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCCGCCGTGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	110219748	110217668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697
ENSMUSG00000036057.12_110217961_110220170_1	chr9	-	1119	9	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	17091	3672	17091	-3672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCCTATGAGGCCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	110220170	110217960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111
ENSMUSG00000036057.12_110218139_110220333_1	chr9	-	1089	9	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	16928	3850	16928	-3850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGGCCAACGTGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	110220333	110218138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276
ENSMUSG00000036057.12_110218319_110221109_1	chr9	-	1226	11	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	16152	4030	16152	-4030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGAAGGTGGGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	110221109	110218318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049
ENSMUSG00000036057.12_110218755_110222489_1	chr9	-	1121	13	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	14772	4466	14772	-4466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCGGGGCTGGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	110222489	110218754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438
ENSMUSG00000036057.12_110219202_110227224_1	chr9	-	1116	14	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	10037	4913	10037	-4913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACCATATCCCCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	110227224	110219201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188
ENSMUSG00000036057.12_110219727_110237281_1	chr9	-	1185	13	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	-20	5438	0	-5438	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCCATGAGGCCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	110237281	110219726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ENSMUSG00000036061.11_103062513_103066146_1	chr15	-	2219	2	FSM	ENSMUSG00000036061.11	ENSMUST00000064067.9	3281	2	283	779	283	-779	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTAGCCAAGCTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	103066146	103062512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_103064629_103066043
ENSMUSG00000036061.11_103062650_103066233_1	chr15	-	2169	2	FSM	ENSMUSG00000036061.11	ENSMUST00000064067.9	3281	2	196	916	196	-916	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGGTCTCTCCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	103066233	103062649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_103064629_103066043
ENSMUSG00000036067.13_26911815_26917294_1	chr2	-	1503	9	NNC	ENSMUSG00000036067.13	novel	1516	9	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCACCTTGGGACAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	26917294	26911814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_26912082_26912724_26912877_26913099_26913262_26913546_26913656_26914194_26914346_26914596_26914806_26915230_26915335_26915912_26916120_26917152
ENSMUSG00000036067.13_26911815_26917294_2	chr2	-	1499	9	NNC	ENSMUSG00000036067.13	novel	1516	9	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCACCTTGGGACAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	26917294	26911814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_26912082_26912724_26912877_26913099_26913262_26913546_26913656_26914200_26914348_26914596_26914806_26915230_26915335_26915912_26916120_26917152
ENSMUSG00000036067.13_26911815_26917294_3	chr2	-	1505	9	FSM	ENSMUSG00000036067.13	ENST00000371899.9	1516	9	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCACCTTGGGACAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	26917294	26911814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26912082_26912724_26912877_26913099_26913262_26913546_26913656_26914194_26914348_26914596_26914806_26915230_26915335_26915912_26916120_26917152
ENSMUSG00000036067.13_26911815_26917294_5	chr2	-	1500	9	NNC	ENSMUSG00000036067.13	novel	1516	9	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCACCTTGGGACAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	26917294	26911814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_26912082_26912724_26912877_26913099_26913262_26913551_26913656_26914194_26914348_26914596_26914806_26915230_26915335_26915912_26916120_26917152
ENSMUSG00000036073.18_41755228_41758238_1	chr4	+	1402	10	FSM	ENSMUSG00000036073.18	ENSMUST00000108038.2	1859	10	0	457	0	-457	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGGACTCACATCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	41755227	41758238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083
ENSMUSG00000036073.18_41755410_41758695_1	chr4	+	1413	11	FSM	ENSMUSG00000036073.18	ENSMUST00000084695.11	1595	11	182	0	-153	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGAGGAGTAGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	41755409	41758695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ENSMUSG00000036073.18_41755496_41758695_1	chr4	+	1327	11	FSM	ENSMUSG00000036073.18	ENSMUST00000084695.11	1595	11	268	0	-67	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGAGGAGTAGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	41755495	41758695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ENSMUSG00000036073.18_41755567_41763868_1	chr4	+	579	6	NNC	ENSMUSG00000036073.18	novel	771	7	NA	NA	4	-1010	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGAGTGAGTGCTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	41755566	41763868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_41755653_41755960_41756131_41756938_41757000_41757155_41757279_41763586_41763682_41763824
ENSMUSG00000036078.17_41738621_41740576_1	chr4	-	987	2	ISM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	783	128	783	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGAGCCACCCCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	41740576	41738620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_41739581_41740549
ENSMUSG00000036078.17_41738670_41740628_1	chr4	-	990	2	ISM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	731	177	731	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGGGCCAGTTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	41740628	41738669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_41739581_41740549
ENSMUSG00000036078.17_41738698_41740628_1	chr4	-	959	2	NNC	ENSMUSG00000036078.17	novel	1640	4	NA	NA	731	-205	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGTTAGAATGGGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	41740628	41738697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_41739578_41740549
ENSMUSG00000036078.17_41738797_41740862_1	chr4	-	964	3	ISM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	497	304	497	-304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGCCCCCCCCCCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	41740862	41738796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_41739581_41740549_41740643_41740775
ENSMUSG00000036078.17_41738843_41740923_1	chr4	-	979	3	ISM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	436	350	436	-350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCATTCCACTCCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	41740923	41738842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_41739581_41740549_41740643_41740775
ENSMUSG00000036078.17_41738904_41741048_1	chr4	-	1043	3	ISM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	311	411	311	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCTTCACCTGCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	41741048	41738903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_41739581_41740549_41740643_41740775
ENSMUSG00000036078.17_41739101_41741186_1	chr4	-	859	4	FSM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	173	608	173	-608	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATACTCCAGGGGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	41741186	41739100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_41739581_41740549_41740643_41740775_41740977_41741101
ENSMUSG00000036078.17_41739101_41741320_1	chr4	-	993	4	FSM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	39	608	39	-608	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATACTCCAGGGGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	41741320	41739100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_41739581_41740549_41740643_41740775_41740977_41741101
ENSMUSG00000036087.19_73131975_73135345_1	chr5	+	2221	2	ISM	ENSMUSG00000036087.19	ENSMUST00000143829.5	4828	9	60263	809	60263	-809	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAGTTTGGTGATATTA	NA	NA	NA	NA	NA	NA	NA	NA	73131974	73135345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_73132190_73133339
ENSMUSG00000036087.19_73132034_73135416_1	chr5	+	2233	2	ISM	ENSMUSG00000036087.19	ENSMUST00000143829.5	4828	9	60322	738	60322	-738	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAATTGCCTTCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	73132033	73135416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_73132190_73133339
ENSMUSG00000036091.9_107462071_107464079_1	chr9	+	1100	2	FSM	ENSMUSG00000036091.9	ENST00000450982.6	1188	2	78	10	78	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGTCCTAGAGGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	107462070	107464079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107462865_107463773
ENSMUSG00000036093.8_52292089_52306134_1	chr2	-	651	4	ISM	ENSMUSG00000036093.8	ENST00000428992.2	736	6	8771	-143	8771	143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGCCCCAAGTTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	52306134	52292088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075
ENSMUSG00000036093.8_52292399_52295071_1	chr2	-	200	2	ISM	ENSMUSG00000036093.8	ENST00000428992.2	736	6	19834	167	19834	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTCTTCTGACCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	52295071	52292398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52292445_52294917
ENSMUSG00000036093.8_52306180_52314913_1	chr2	-	190	3	NNC	ENSMUSG00000036093.8	novel	5239	6	NA	NA	0	-13948	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	135	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGAAGAGATTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	52314913	52306179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_52306224_52306647_52306709_52314828
ENSMUSG00000036095.12_37930843_38278080_1	chr12	+	2025	19	NNC	ENSMUSG00000036095.12	novel	6373	25	NA	NA	41	91241	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTTACAGCATCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	37930842	38278080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_37930954_38031753_38032010_38134165_38134267_38150362_38150517_38164531_38164673_38170604_38170655_38174167_38174243_38177262_38177383_38186539_38186658_38189403_38189493_38189568_38189686_38197501_38197601_38216741_38216775_38223725_38223843_38234896_38234971_38240058_38240134_38264301_38264388_38266017_38266108_38277961
ENSMUSG00000036095.12_37930847_38278083_1	chr12	+	2021	20	ISM	ENSMUSG00000036095.12	ENST00000402815.6	5268	26	45	405127	45	91244	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTACAGCATCATCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	37930846	38278083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_37930954_38031753_38032010_38134165_38134243_38137571_38137593_38150362_38150517_38164531_38164673_38170604_38170655_38174167_38174243_38177262_38177383_38186539_38186658_38189403_38189493_38189568_38189686_38197501_38197601_38216741_38216775_38223725_38223843_38234896_38234971_38240058_38240134_38264301_38264388_38266017_38266108_38277961
ENSMUSG00000036095.12_38031754_38477493_1	chr12	+	2112	20	NNC	ENSMUSG00000036095.12	novel	4085	25	NA	NA	-3	-176676	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAAAATGGGCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	38031753	38477493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_38032010_38134165_38134267_38150362_38150517_38164531_38164673_38170604_38170655_38174167_38174243_38177262_38177383_38186539_38186658_38189403_38189493_38189568_38189686_38197501_38197601_38216741_38216775_38223725_38223843_38234896_38234971_38240058_38240134_38264301_38264388_38266017_38266108_38277961_38278123_38379991_38380057_38477402
ENSMUSG00000036095.12_38031914_38488607_1	chr12	+	2022	21	NNC	ENSMUSG00000036095.12	novel	4085	25	NA	NA	-15	-165562	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGGAGGATCTAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	38031913	38488607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_38032010_38134165_38134267_38150362_38150517_38164531_38164673_38170604_38170655_38174167_38174243_38177262_38177383_38186539_38186658_38189403_38189493_38189568_38189686_38197501_38197601_38216741_38216775_38223725_38223843_38234896_38234971_38240058_38240134_38264301_38264388_38266017_38266108_38277961_38278123_38379991_38380057_38477402_38477494_38488537
ENSMUSG00000036095.12_38031935_38150386_1	chr12	+	197	4	ISM	ENSMUSG00000036095.12	ENSMUST00000221176.2	1439	10	101762	36453	6	-36453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCATGAAGACCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	38031934	38150386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_38032010_38134165_38134243_38137571_38137593_38150362
ENSMUSG00000036095.12_38031980_38488668_1	chr12	+	2017	21	NNC	ENSMUSG00000036095.12	novel	4085	25	NA	NA	51	-165501	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAGGCTCTGACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	38031979	38488668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_38032010_38134165_38134267_38150362_38150517_38164531_38164673_38170604_38170655_38174167_38174243_38177262_38177383_38186539_38186658_38189403_38189493_38189568_38189686_38197501_38197601_38216741_38216775_38223725_38223843_38234896_38234971_38240058_38240134_38264301_38264388_38266017_38266108_38277961_38278123_38379991_38380057_38477402_38477494_38488537
ENSMUSG00000036095.12_38134166_38488733_1	chr12	+	2049	21	ISM	ENSMUSG00000036095.12	ENST00000402815.6	5268	26	203364	194477	102237	-165436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACTTCCCAAAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	38134165	38488733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_38134243_38137571_38137593_38150362_38150517_38164531_38164673_38170604_38170655_38174167_38174243_38177262_38177383_38186539_38186658_38189403_38189493_38189568_38189686_38197501_38197601_38216741_38216775_38223725_38223843_38234896_38234971_38240058_38240134_38264301_38264388_38266017_38266108_38277961_38278123_38379991_38380057_38477402_38477494_38488537
ENSMUSG00000036095.12_38150430_38654129_1	chr12	+	2033	21	ISM	ENSMUSG00000036095.12	ENSMUST00000220990.2	4085	25	220094	27989	118501	-40	internal_fragment	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAGAGCCCTGGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	38150429	38654129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_38150517_38164531_38164673_38170604_38170655_38174167_38174243_38177262_38177383_38186539_38186658_38189403_38189493_38189568_38189686_38197501_38197601_38216741_38216775_38223725_38223843_38234896_38234971_38240058_38240134_38264301_38264388_38266017_38266108_38277961_38278123_38379991_38380057_38477402_38477494_38488537_38488734_38652714_38652836_38654101
ENSMUSG00000036095.12_38164548_38680691_1	chr12	+	2073	21	ISM	ENSMUSG00000036095.12	ENSMUST00000220990.2	4085	25	234212	1427	132619	-1427	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATCGGGAGAAATCTAA	NA	NA	NA	NA	NA	NA	NA	NA	38164547	38680691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_38164673_38170604_38170655_38174167_38174243_38177262_38177383_38186539_38186658_38189403_38189493_38189568_38189686_38197501_38197601_38216741_38216775_38223725_38223843_38234896_38234971_38240058_38240134_38264301_38264388_38266017_38266108_38277961_38278123_38379991_38380057_38477402_38477494_38488537_38488734_38652714_38652836_38654101_38654163_38680581
ENSMUSG00000036095.12_38164632_38680714_1	chr12	+	2012	21	ISM	ENSMUSG00000036095.12	ENSMUST00000220990.2	4085	25	234296	1404	132703	-1404	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATACTTGGGCCATGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	38164631	38680714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_38164673_38170604_38170655_38174167_38174243_38177262_38177383_38186539_38186658_38189403_38189493_38189568_38189686_38197501_38197601_38216741_38216775_38223725_38223843_38234896_38234971_38240058_38240134_38264301_38264388_38266017_38266108_38277961_38278123_38379991_38380057_38477402_38477494_38488537_38488734_38652714_38652836_38654101_38654163_38680581
ENSMUSG00000036095.12_38177334_38680976_1	chr12	+	2037	18	ISM	ENSMUSG00000036095.12	ENSMUST00000220990.2	4085	25	246998	1142	145405	-1142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACTGCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	38177333	38680976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_38177383_38186539_38186658_38189403_38189493_38189568_38189686_38197501_38197601_38216741_38216775_38223725_38223843_38234896_38234971_38240058_38240134_38264301_38264388_38266017_38266108_38277961_38278123_38379991_38380057_38477402_38477494_38488537_38488734_38652714_38652836_38654101_38654163_38680581
ENSMUSG00000036095.12_38186639_38681103_1	chr12	+	2016	17	ISM	ENSMUSG00000036095.12	ENSMUST00000220990.2	4085	25	256303	1015	154710	-1015	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGAGTCACTGCATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	38186638	38681103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_38186658_38189403_38189493_38189568_38189686_38197501_38197601_38216741_38216775_38223725_38223843_38234896_38234971_38240058_38240134_38264301_38264388_38266017_38266108_38277961_38278123_38379991_38380057_38477402_38477494_38488537_38488734_38652714_38652836_38654101_38654163_38680581
ENSMUSG00000036095.12_38223816_38681565_1	chr12	+	2031	12	ISM	ENSMUSG00000036095.12	ENST00000399322.7	5116	25	192059	1645	191887	-553	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCTTCAAAACCAGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	38223815	38681565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_38223843_38234896_38234971_38240058_38240134_38264301_38264388_38266017_38266108_38277961_38278123_38379991_38380057_38477402_38477494_38488537_38488734_38652714_38652836_38654101_38654163_38680581
ENSMUSG00000036095.12_38264370_38681814_1	chr12	+	2036	9	ISM	ENSMUSG00000036095.12	ENST00000399322.7	5116	25	232613	1396	232441	-304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGTTTGGGAATATA	NA	NA	NA	NA	NA	NA	NA	NA	38264369	38681814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_38264388_38266017_38266108_38277961_38278123_38379991_38380057_38477402_38477494_38488537_38488734_38652714_38652836_38654101_38654163_38680581
ENSMUSG00000036095.12_38278056_38681994_1	chr12	+	2014	7	ISM	ENSMUSG00000036095.12	ENST00000399322.7	5116	25	246299	1216	246127	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCATCACTGCACGATT	NA	NA	NA	NA	NA	NA	NA	NA	38278055	38681994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_38278123_38379991_38380057_38477402_38477494_38488537_38488734_38652714_38652836_38654101_38654163_38680581
ENSMUSG00000036095.12_38379991_38682118_1	chr12	+	2072	6	ISM	ENSMUSG00000036095.12	ENST00000399322.7	5116	25	348234	1092	348062	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTCTATTGATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	38379990	38682118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_38380057_38477402_38477494_38488537_38488734_38652714_38652836_38654101_38654163_38680581
ENSMUSG00000036095.12_38488595_38682267_1	chr12	+	2007	4	ISM	ENSMUSG00000036095.12	ENST00000399322.7	5116	25	456838	943	456666	149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATAGCCGCTCTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	38488594	38682267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_38488734_38652714_38652836_38654101_38654163_38680581
ENSMUSG00000036095.12_38488648_38682340_1	chr12	+	2027	4	ISM	ENSMUSG00000036095.12	ENST00000399322.7	5116	25	456891	870	456719	222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGGATGCTAAATACC	NA	NA	NA	NA	NA	NA	NA	NA	38488647	38682340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_38488734_38652714_38652836_38654101_38654163_38680581
ENSMUSG00000036095.12_38652753_38682468_1	chr12	+	2031	3	ISM	ENSMUSG00000036095.12	ENST00000399322.7	5116	25	620996	742	620824	350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCAGTTGTCCTAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	38652752	38682468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_38652836_38654101_38654163_38680581
ENSMUSG00000036095.12_38652821_38682501_1	chr12	+	1996	3	ISM	ENSMUSG00000036095.12	ENST00000399322.7	5116	25	621064	709	620892	383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTATTCATCAGAACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	38652820	38682501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_38652836_38654101_38654163_38680581
ENSMUSG00000036095.12_38654143_38682631_1	chr12	+	2070	2	ISM	ENSMUSG00000036095.12	ENST00000399322.7	5116	25	622386	579	622214	513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAATTGATGAGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	38654142	38682631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_38654163_38680581
ENSMUSG00000036104.13_127801815_127865822_1	chr1	+	2314	18	ISM	ENSMUSG00000036104.13	ENSMUST00000212506.2	2967	25	5266	4525	5266	-4525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGTCTCAGTTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	127801814	127865822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725
ENSMUSG00000036104.13_127816928_127866014_1	chr1	+	2281	18	ISM	ENSMUSG00000036104.13	ENSMUST00000212506.2	2967	25	20379	4333	20379	-4333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCTGAGGACAAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	127816927	127866014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934
ENSMUSG00000036104.13_127829315_127866885_1	chr1	+	2348	18	ISM	ENSMUSG00000036104.13	ENSMUST00000212506.2	2967	25	32766	3462	32766	-3462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGCGAGTCCTCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	127829314	127866885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782
ENSMUSG00000036104.13_127831450_127870223_1	chr1	+	2299	18	ISM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	34940	1382	34901	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCCACTGTGCCGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	127831449	127870223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ENSMUSG00000036104.13_127831512_127870347_1	chr1	+	2361	18	ISM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	35002	1258	34963	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAGGAGGAGGAGCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	127831511	127870347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ENSMUSG00000036104.13_127847319_127870648_1	chr1	+	2334	14	ISM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	50809	957	50770	301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACATTCTGGACACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	127847318	127870648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ENSMUSG00000036104.13_127853122_127870858_1	chr1	+	2281	12	ISM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	56612	747	56573	511	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGTAGCTGCAGATTA	NA	NA	NA	NA	NA	NA	NA	NA	127853121	127870858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ENSMUSG00000036104.13_127855262_127871048_1	chr1	+	2349	11	ISM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	58752	557	58713	-557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCAGTTAGTGAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	127855261	127871048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ENSMUSG00000036104.13_127858545_127871332_1	chr1	+	2279	8	ISM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	62035	273	61996	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATTTATCTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	127858544	127871332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ENSMUSG00000036104.13_127858687_127871605_1	chr1	+	2410	8	ISM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	62177	0	62138	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGGACTTGTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	127858686	127871605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ENSMUSG00000036106.16_84565399_84587874_1	chr15	+	1635	8	FSM	ENSMUSG00000036106.16	ENSMUST00000065499.5	1830	8	196	-1	196	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTCTGCCCCCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	84565398	84587874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
ENSMUSG00000036111.9_108737882_108742784_1	chr7	-	550	3	ISM	ENSMUSG00000036111.9	ENSMUST00000208136.2	772	4	26935	-58	26935	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTACAGTCTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	108742784	108737881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_108738184_108739788_108739915_108742662
ENSMUSG00000036111.9_108738042_108774180_1	chr7	-	518	4	FSM	ENSMUSG00000036111.9	ENSMUST00000207178.2	912	4	234	160	234	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCACCTGTCCACCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	108774180	108738041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_108738184_108739788_108739915_108742662_108742877_108774144
ENSMUSG00000036111.9_108738103_108774238_1	chr7	-	515	4	FSM	ENSMUSG00000036111.9	ENSMUST00000207178.2	912	4	176	221	176	-163	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTTGAATCCCAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	108774238	108738102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_108738184_108739788_108739915_108742662_108742877_108774144
ENSMUSG00000036111.9_108738168_108774289_1	chr7	-	501	4	FSM	ENSMUSG00000036111.9	ENSMUST00000207178.2	912	4	125	286	125	-228	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCTTCCTGAAGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	108774289	108738167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_108738184_108739788_108739915_108742662_108742877_108774144
ENSMUSG00000036111.9_108739838_108774414_1	chr7	-	561	3	ISM	ENSMUSG00000036111.9	ENSMUST00000207178.2	912	4	0	1956	0	-1898	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGTGTATCACCTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	108774414	108739837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_108739915_108742662_108742877_108774144
ENSMUSG00000036112.16_93695350_93698862_1	chr10	-	2302	3	ISM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	26814	999	26711	-999	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCTACAATGTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	93698862	93695349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_93697465_93698238_93698355_93698791
ENSMUSG00000036112.16_93695483_93701365_1	chr10	-	2299	4	ISM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	24311	1132	24208	-1132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTTTGTTTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	93701365	93695482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268
ENSMUSG00000036112.16_93695688_93706160_1	chr10	-	2371	6	ISM	ENSMUSG00000036112.16	ENST00000261220.13	1817	10	19413	-1101	19413	1101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGCCAAAACCAACACT	NA	NA	NA	NA	NA	NA	NA	NA	93706160	93695687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978
ENSMUSG00000036112.16_93696111_93722881_1	chr10	-	2305	10	ISM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	2795	1760	2692	678	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGCTTCCGGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	93722881	93696110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855
ENSMUSG00000036112.16_93696175_93722940_1	chr10	-	2300	10	ISM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	2736	1824	2633	614	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCCAAATTCGTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	93722940	93696174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855
ENSMUSG00000036112.16_93696250_93722963_1	chr10	-	2248	10	ISM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	2713	1899	2610	539	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGACTTTAGGCTGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	93722963	93696249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855
ENSMUSG00000036112.16_93696790_93725494_1	chr10	-	1737	10	FSM	ENSMUSG00000036112.16	ENST00000261220.13	1817	10	79	1	79	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATACATTTTAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	93725494	93696789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93722855_93722964_93725399
ENSMUSG00000036112.16_93696790_93725670_1	chr10	-	1979	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	6	2439	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATACATTTTAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	93725670	93696789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ENSMUSG00000036112.16_93697163_93726156_1	chr10	-	2084	11	NNC	ENSMUSG00000036112.16	novel	2551	12	NA	NA	-480	-361	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1993	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACATTATACCACAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	93726156	93697162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707504_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ENSMUSG00000036112.16_93697304_93726991_1	chr10	-	1964	12	FSM	ENSMUSG00000036112.16	ENSMUST00000180840.8	2551	12	73	514	73	-502	multi-exon	FALSE	canonical	NA	NA	NA	NA	1480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTAAAGGGTCATATACA	NA	NA	NA	NA	NA	NA	NA	NA	93726991	93697303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399_93726137_93726958
ENSMUSG00000036120.11_70585667_70591746_1	chr8	-	1340	9	FSM	ENSMUSG00000036120.11	ENSMUST00000075724.9	3609	9	58	2211	0	249	multi-exon	TRUE	canonical	NA	NA	NA	NA	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCACTGACTAAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	70591746	70585666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
ENSMUSG00000036120.11_70585731_70591746_1	chr8	-	1276	9	FSM	ENSMUSG00000036120.11	ENSMUST00000075724.9	3609	9	58	2275	0	185	multi-exon	FALSE	canonical	NA	NA	NA	NA	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAATGGTGGTTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	70591746	70585730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
ENSMUSG00000036120.11_70586876_70588944_1	chr8	-	460	5	FSM	ENSMUSG00000036120.11	ENST00000456252.7	460	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTTGGGATGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	70588944	70586875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588859
ENSMUSG00000036120.11_70586876_70588944_2	chr8	-	453	5	NNC	ENSMUSG00000036120.11	novel	460	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTTGGGATGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	70588944	70586875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_70586957_70587261_70587322_70587688_70587815_70587940_70588042_70588859
ENSMUSG00000036123.9_74298858_74311159_1	chr13	+	1378	10	ISM	ENSMUSG00000036123.9	ENSMUST00000036208.7	2490	16	29224	3024	73	-1279	internal_fragment	TRUE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCATTCGCTCCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	74298857	74311159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74299082_74303207_74303369_74305103_74305183_74305723_74305902_74306793_74307015_74307347_74307551_74308339_74308430_74308545_74308617_74309815_74309946_74311138
ENSMUSG00000036123.9_74298959_74311823_1	chr13	+	1394	11	ISM	ENSMUSG00000036123.9	ENSMUST00000036208.7	2490	16	29325	2360	174	-615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGACATGCAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	74298958	74311823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74299082_74303207_74303369_74305103_74305183_74305723_74305902_74306793_74307015_74307347_74307551_74308339_74308430_74308545_74308617_74309815_74309946_74311138_74311255_74311801
ENSMUSG00000036123.9_74299005_74311881_1	chr13	+	1406	11	ISM	ENSMUSG00000036123.9	ENSMUST00000036208.7	2490	16	29371	2302	220	-557	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCACCCACCACACACTG	NA	NA	NA	NA	NA	NA	NA	NA	74299004	74311881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74299082_74303207_74303369_74305103_74305183_74305723_74305902_74306793_74307015_74307347_74307551_74308339_74308430_74308545_74308617_74309815_74309946_74311138_74311255_74311801
ENSMUSG00000036123.9_74299062_74311931_1	chr13	+	1399	11	ISM	ENSMUSG00000036123.9	ENSMUST00000036208.7	2490	16	29428	2252	277	-507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGTACCATGAGATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	74299061	74311931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74299082_74303207_74303369_74305103_74305183_74305723_74305902_74306793_74307015_74307347_74307551_74308339_74308430_74308545_74308617_74309815_74309946_74311138_74311255_74311801
ENSMUSG00000036123.9_74303262_74312439_1	chr13	+	1482	11	ISM	ENSMUSG00000036123.9	ENSMUST00000036208.7	2490	16	33628	1744	-1846	1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCGCGCACAGAAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	74303261	74312439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74303369_74305103_74305183_74305723_74305902_74306793_74307015_74307347_74307551_74308339_74308430_74308545_74308617_74309815_74309946_74311138_74311255_74311801_74311932_74312282
ENSMUSG00000036123.9_74309842_74312695_1	chr13	+	580	5	ISM	ENSMUSG00000036123.9	ENST00000457608.1	1756	13	4734	1486	4734	257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACACCATCAAGGAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	74309841	74312695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74309946_74311138_74311255_74311801_74311932_74312282_74312460_74312642
ENSMUSG00000036123.9_74311187_74314034_1	chr13	+	593	6	ISM	ENSMUSG00000036123.9	ENST00000457608.1	1756	13	6079	147	6079	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCGTGTTCAGATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	74311186	74314034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74311255_74311801_74311932_74312282_74312460_74312642_74312716_74313416_74313489_74313961
ENSMUSG00000036138.17_119175588_119177667_1	chr9	+	149	3	ISM	ENSMUSG00000036138.17	ENSMUST00000175743.8	1219	11	5007	1432	5007	-1432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGCTTCCGTGCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	119175587	119177667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_119175635_119176795_119176877_119177646
ENSMUSG00000036138.17_119178117_119178595_1	chr9	+	144	3	ISM	ENSMUSG00000036138.17	ENSMUST00000039784.12	1762	12	7757	770	7536	-504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTGAACCCGCTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	119178116	119178595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_119178167_119178419_119178476_119178557
ENSMUSG00000036138.17_119178628_119179099_1	chr9	+	152	2	ISM	ENSMUSG00000036138.17	ENSMUST00000175743.8	1219	11	8047	0	8047	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCTGCAGGCGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	119178627	119179099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_119178704_119179023
ENSMUSG00000036138.17_119178678_119179152_1	chr9	+	155	2	ISM	ENSMUSG00000036138.17	ENSMUST00000175743.8	1219	11	8097	-53	8097	53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGCTACAGAAGCCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	119178677	119179152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_119178704_119179023
ENSMUSG00000036139.7_102885467_102892907_1	chr15	+	1750	3	FSM	ENSMUSG00000036139.7	ENSMUST00000001706.7	2374	3	0	624	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAAAAACTCTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	102885466	102892907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102885537_102889523_102890623_102892326
ENSMUSG00000036139.7_102890362_102892494_1	chr15	+	429	2	ISM	ENSMUSG00000036139.7	ENST00000508190.1	1224	3	4866	420	4866	-420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAATCTGGTTTCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	102890361	102892494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102890623_102892326
ENSMUSG00000036167.17_93339413_93387581_1	chr15	+	1306	6	ISM	ENSMUSG00000036167.17	ENSMUST00000068457.15	3351	9	43132	1798	30840	286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGATGTTGATTTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	93339412	93387581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_93339594_93349997_93350055_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ENSMUSG00000036167.17_93339485_93387633_1	chr15	+	1286	6	ISM	ENSMUSG00000036167.17	ENSMUST00000068457.15	3351	9	43204	1746	30912	338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCACCTTCATTGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	93339484	93387633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_93339594_93349997_93350055_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ENSMUSG00000036167.17_93363040_93397952_1	chr15	+	309	3	ISM	ENSMUSG00000036167.17	ENST00000317560.13	1096	8	54467	167	54467	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCATGCCTCACAAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	93363039	93397952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_93363127_93386854_93386981_93397856
ENSMUSG00000036167.17_93363050_93388084_1	chr15	+	1307	2	ISM	ENSMUSG00000036167.17	ENST00000317560.13	1096	8	54477	10035	54477	789	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAATTCTTATTCAATAT	NA	NA	NA	NA	NA	NA	NA	NA	93363049	93388084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_93363127_93386854
ENSMUSG00000036167.17_93363092_93398003_1	chr15	+	308	3	ISM	ENSMUSG00000036167.17	ENST00000317560.13	1096	8	54519	116	54519	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGCAAGCACTATTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	93363091	93398003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_93363127_93386854_93386981_93397856
ENSMUSG00000036169.7_36364332_36367563_2	chr12	+	771	3	FSM	ENSMUSG00000036169.7	ENST00000396652.1	1803	3	228	804	194	-804	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCAGGCTGTCCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	36364331	36367563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_36364498_36365600_36365673_36367030
ENSMUSG00000036180.16_70361307_70364386_1	chr8	-	1378	2	ISM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	62535	1	62535	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	70364386	70361306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70362625_70364326
ENSMUSG00000036180.16_70361307_70364459_1	chr8	-	1451	2	ISM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	62462	1	62462	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	70364459	70361306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70362625_70364326
ENSMUSG00000036180.16_70361645_70365744_1	chr8	-	1420	4	ISM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	61177	339	61177	-338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCCACAGCCCTTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	70365744	70361644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572
ENSMUSG00000036180.16_70361763_70365839_1	chr8	-	1397	4	ISM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	61082	457	61082	-456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGCTGGGTTACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	70365839	70361762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572
ENSMUSG00000036180.16_70361892_70367271_1	chr8	-	1406	5	ISM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	59650	586	59650	-585	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTAGTTGTCTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	70367271	70361891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168
ENSMUSG00000036180.16_70362193_70369049_1	chr8	-	1398	6	ISM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	57872	887	57872	-886	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGCACCGGGGGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	70369049	70362192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933
ENSMUSG00000036180.16_70362296_70369277_1	chr8	-	1403	7	ISM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	57644	990	57644	-989	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGTTTGCCCGACACCA	NA	NA	NA	NA	NA	NA	NA	NA	70369277	70362295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218
ENSMUSG00000036180.16_70362548_70370438_1	chr8	-	1380	9	ISM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	56483	1242	56483	-1241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGACATGATTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	70370438	70362547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372
ENSMUSG00000036180.16_70364385_70370705_1	chr8	-	1421	9	ISM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	56216	3079	56216	-3078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTGGGCACCGGCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	70370705	70364384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595
ENSMUSG00000036186.6_26518506_26525646_1	chr2	+	722	5	FSM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	37	863	37	-863	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGTCCGTGTGGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	26518505	26525646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_26518712_26522615_26522751_26524799_26524908_26524998_26525176_26525550
ENSMUSG00000036186.6_26522649_26525823_1	chr2	+	660	4	ISM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	4180	686	4180	-686	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGTGCTGCACAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	26522648	26525823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26522751_26524799_26524908_26524998_26525176_26525550
ENSMUSG00000036186.6_26522715_26525871_1	chr2	+	642	4	ISM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	4246	638	4246	-638	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGGCGTGCAAAGATCGC	NA	NA	NA	NA	NA	NA	NA	NA	26522714	26525871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26522751_26524799_26524908_26524998_26525176_26525550
ENSMUSG00000036186.6_26524890_26526000_1	chr2	+	645	3	ISM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	6421	509	6421	-509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGGCTGACCTGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	26524889	26526000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26524908_26524998_26525176_26525550
ENSMUSG00000036186.6_26525107_26526133_1	chr2	+	652	2	ISM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	6638	376	6638	-376	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCAAGGGTGACCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	26525106	26526133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26525176_26525550
ENSMUSG00000036199.10_70346830_70355208_1	chr8	-	1244	5	NNC	ENSMUSG00000036199.10	novel	1251	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACTCTATAGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	70355208	70346829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_70347061_70347153_70347226_70347891_70347964_70354191_70354383_70354530
ENSMUSG00000036199.10_70346830_70355208_2	chr8	-	1248	5	NNC	ENSMUSG00000036199.10	novel	1251	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACTCTATAGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	70355208	70346829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_70347061_70347153_70347226_70347891_70347964_70354187_70354383_70354530
ENSMUSG00000036199.10_70346830_70355208_3	chr8	-	1246	5	NNC	ENSMUSG00000036199.10	novel	1251	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACTCTATAGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	70355208	70346829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_70347061_70347153_70347226_70347891_70347971_70354196_70354383_70354530
ENSMUSG00000036202.17_51963196_51985949_1	chr2	+	1882	17	NNC	ENSMUSG00000036202.17	novel	7466	34	NA	NA	50	-25534	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGAGCATCTCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	51963195	51985949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983606_51984600_51984675_51985833
ENSMUSG00000036202.17_51966095_51988019_1	chr2	+	1887	16	NNC	ENSMUSG00000036202.17	novel	7466	34	NA	NA	2949	-23464	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGACATTTCCCACGGTA	NA	NA	NA	NA	NA	NA	NA	NA	51966094	51988019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983606_51984600_51984675_51985833_51986015_51987928
ENSMUSG00000036202.17_51967017_51988462_1	chr2	+	1879	16	NNC	ENSMUSG00000036202.17	novel	7466	34	NA	NA	3871	-23021	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGAAGAACTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	51967016	51988462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983606_51984600_51984675_51985833_51986015_51987928_51988037_51988368
ENSMUSG00000036202.17_51967204_51988964_1	chr2	+	1932	16	NNC	ENSMUSG00000036202.17	novel	7466	34	NA	NA	4058	-22519	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTATTGTCTTTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	51967203	51988964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983606_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864
ENSMUSG00000036202.17_51968355_51993543_1	chr2	+	1919	16	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	5209	17940	5209	-17940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTCTAAGCCTCAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	51968354	51993543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444
ENSMUSG00000036202.17_51972734_51995517_1	chr2	+	1871	16	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	9588	15966	9588	-15966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAACATCTTTCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	51972733	51995517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446
ENSMUSG00000036202.17_51978706_51997737_1	chr2	+	1911	16	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	15560	13746	15560	-13746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAAAAAAAGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	51978705	51997737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649
ENSMUSG00000036202.17_51979585_51998528_1	chr2	+	1899	16	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	16439	12955	16439	-12955	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCCTCCAGAAGGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	51979584	51998528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451
ENSMUSG00000036202.17_51979585_51998554_1	chr2	+	1925	16	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	16439	12929	16439	-12929	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAGGGTTCTAACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	51979584	51998554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451
ENSMUSG00000036202.17_51980181_51999287_1	chr2	+	1947	16	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	17035	12196	17035	-12196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATAAATCTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	51980180	51999287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203
ENSMUSG00000036202.17_51982290_51999959_1	chr2	+	1859	16	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	19144	11524	19144	-11524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCCGGAGAACTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	51982289	51999959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ENSMUSG00000036202.17_51982344_52000014_1	chr2	+	1860	16	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	19198	11469	19198	-11469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGTGGCTCTGTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	51982343	52000014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ENSMUSG00000036202.17_51985918_52000321_1	chr2	+	1873	13	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	22772	11162	22772	-11162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAACACTGACATGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	51985917	52000321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ENSMUSG00000036202.17_51987960_52000444_1	chr2	+	1868	12	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	24814	11039	24814	-11039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTACTAAAAAGTCTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	51987959	52000444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ENSMUSG00000036202.17_51988488_52000633_1	chr2	+	1861	11	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	25342	10850	25342	-10850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAACAGAAGAGAAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	51988487	52000633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ENSMUSG00000036202.17_51993609_52000936_1	chr2	+	1869	9	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	30463	10547	30463	-10547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACCTATACAGGAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	51993608	52000936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ENSMUSG00000036202.17_51995540_52001179_1	chr2	+	1875	7	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	32394	10304	32394	-10304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAATCTGACAGTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	51995539	52001179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ENSMUSG00000036202.17_51997694_52001424_1	chr2	+	1866	5	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	34548	10059	34548	-10059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGGCCTGCAGATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	51997693	52001424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ENSMUSG00000036202.17_51997740_52001485_1	chr2	+	1881	5	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	34594	9998	34594	-9998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTAGACAGTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	51997739	52001485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ENSMUSG00000036202.17_51999220_52001702_1	chr2	+	1900	3	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	36074	9781	36074	-9781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCACAGTCCCAGGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	51999219	52001702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_51999288_51999362_51999415_51999922
ENSMUSG00000036202.17_52001293_52006912_1	chr2	+	1933	3	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	38147	4571	38147	-4571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCAGCATCAGTTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	52001292	52006912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_52003013_52006259_52006407_52006846
ENSMUSG00000036202.17_52001364_52006957_1	chr2	+	1907	3	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	38218	4526	38218	-4526	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGTAAGAGGAGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	52001363	52006957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_52003013_52006259_52006407_52006846
ENSMUSG00000036202.17_52001473_52009182_1	chr2	+	1957	4	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	38327	2301	38327	-2301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGTTGGTCATTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	52001472	52009182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_52003013_52006259_52006407_52006846_52006963_52009028
ENSMUSG00000036202.17_52001637_52010355_1	chr2	+	1877	5	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	38491	1128	38491	-1128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGATGAAGAAAGGTTCGC	NA	NA	NA	NA	NA	NA	NA	NA	52001636	52010355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271
ENSMUSG00000036202.17_52002145_52011485_1	chr2	+	1876	6	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	38999	-2	38999	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCATATTTTGGTATA	NA	NA	NA	NA	NA	NA	NA	NA	52002144	52011485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ENSMUSG00000036223.17_74329650_74333044_1	chr18	-	717	3	ISM	ENSMUSG00000036223.17	ENST00000285116.8	676	5	4416	-323	4416	323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGAAAGACCGTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	74333044	74329649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_74330123_74330584_74330755_74332970
ENSMUSG00000036223.17_74329795_74335709_1	chr18	-	685	4	ISM	ENSMUSG00000036223.17	ENSMUST00000040188.16	2630	7	5141	1425	1751	178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCACAGTAAGCCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	74335709	74329794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660
ENSMUSG00000036223.17_74329973_74337460_1	chr18	-	672	5	NIC	ENSMUSG00000036223.17	novel	676	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGAAGACTCGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	74337460	74329972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr18_-_74330123_74330584_74330755_74332970_74333099_74335660_74335759_74337334
ENSMUSG00000036223.17_74329973_74337460_2	chr18	-	670	5	NNC	ENSMUSG00000036223.17	novel	676	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGAAGACTCGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	74337460	74329972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_74330123_74330584_74330755_74332970_74333093_74335656_74335759_74337334
ENSMUSG00000036223.17_74329973_74337460_3	chr18	-	668	5	NNC	ENSMUSG00000036223.17	novel	676	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGAAGACTCGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	74337460	74329972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_74330123_74330584_74330755_74332978_74333099_74335656_74335759_74337334
ENSMUSG00000036223.17_74329973_74337460_4	chr18	-	676	5	FSM	ENSMUSG00000036223.17	ENST00000285116.8	676	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGAAGACTCGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	74337460	74329972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_74330123_74330584_74330755_74332970_74333099_74335656_74335759_74337334
ENSMUSG00000036223.17_74330024_74339918_1	chr18	-	689	6	ISM	ENSMUSG00000036223.17	ENSMUST00000040188.16	2630	7	932	1654	932	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTCAGAGGTCCGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	74339918	74330023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859
ENSMUSG00000036223.17_74330622_74340710_1	chr18	-	700	6	ISM	ENSMUSG00000036223.17	ENSMUST00000040188.16	2630	7	140	2252	140	-649	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGATTTATTAATGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	74340710	74330621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340600
ENSMUSG00000036223.17_74330675_74340818_1	chr18	-	755	6	ISM	ENSMUSG00000036223.17	ENSMUST00000040188.16	2630	7	32	2305	32	-702	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATTATGCATCAACCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	74340818	74330674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340600
ENSMUSG00000036225.16_15101742_15119537_1	chr18	-	1462	3	ISM	ENSMUSG00000036225.16	ENSMUST00000168989.9	2777	5	77138	-715	77138	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTCTCTTGTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	15119537	15101741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_15102753_15107036_15107343_15119392
ENSMUSG00000036225.16_15101891_15140816_1	chr18	-	1377	4	ISM	ENSMUSG00000036225.16	ENSMUST00000168989.9	2777	5	55859	-566	55859	-83	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTCCAGTTTCAGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	15140816	15101890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_15102753_15107036_15107343_15119392_15119538_15140752
ENSMUSG00000036225.16_15101938_15140871_1	chr18	-	1385	4	ISM	ENSMUSG00000036225.16	ENSMUST00000168989.9	2777	5	55804	-519	55804	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCTGATCGTTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	15140871	15101937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_15102753_15107036_15107343_15119392_15119538_15140752
ENSMUSG00000036225.16_15101978_15140931_1	chr18	-	1405	4	ISM	ENSMUSG00000036225.16	ENSMUST00000168989.9	2777	5	55744	-479	55744	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTTGTCCACCGCACA	NA	NA	NA	NA	NA	NA	NA	NA	15140931	15101977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_15102753_15107036_15107343_15119392_15119538_15140752
ENSMUSG00000036225.16_15102228_15197191_1	chr18	-	1379	5	NNC	ENSMUSG00000036225.16	novel	2108	5	NA	NA	303	229	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATGAGCAGGGAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	15197191	15102227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_15102753_15107042_15107343_15119392_15119538_15140752_15140932_15196961
ENSMUSG00000036225.16_15102281_15197252_1	chr18	-	1393	5	FSM	ENSMUSG00000036225.16	ENST00000408011.7	2108	5	242	473	242	176	multi-exon	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGATGACCGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	15197252	15102280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_15102753_15107036_15107343_15119392_15119538_15140752_15140932_15196961
ENSMUSG00000036241.4_41174083_41189183_1	chr4	+	175	3	ISM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	38340	4197	38340	-4197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCCCAACACCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	41174082	41189183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_41174128_41183244_41183343_41189151
ENSMUSG00000036241.4_41183265_41189250_1	chr4	+	177	2	ISM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	47522	4130	47522	-4130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGGAAAAGACAAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	41183264	41189250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_41183343_41189151
ENSMUSG00000036244.6_58267718_58277652_1	chr9	-	913	9	FSM	ENSMUSG00000036244.6	ENST00000535547.6	870	9	-43	0	-43	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGCTGACCAGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	58277652	58267717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_58267801_58268463_58268581_58269307_58269409_58269660_58269758_58270097_58270199_58270295_58270407_58271055_58271151_58273902_58274007_58277548
ENSMUSG00000036256.14_77499073_77555595_1	chr5	-	565	4	ISM	ENSMUSG00000036256.14	ENSMUST00000046746.10	1116	5	293	1986	292	-1978	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1055	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAGCCAGCTCGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	77555595	77499072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77499202_77499759_77499877_77503408_77503519_77555386
ENSMUSG00000036256.14_77499073_77555595_2	chr5	-	559	4	NNC	ENSMUSG00000036256.14	novel	1116	5	NA	NA	292	-1978	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAGCCAGCTCGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	77555595	77499072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_77499202_77499765_77499877_77503408_77503519_77555386
ENSMUSG00000036256.14_77503407_77555888_1	chr5	-	614	2	ISM	ENSMUSG00000036256.14	ENSMUST00000046746.10	1116	5	0	6320	0	-6312	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	880	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGTGCAGGCCTCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	77555888	77503406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77503519_77555386
ENSMUSG00000036270.17_106607513_106619840_2	chr8	+	4749	29	NNC	ENSMUSG00000036270.17	novel	4744	29	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	796	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	106607512	106619840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614956_106615048_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ENSMUSG00000036270.17_106607513_106619840_3	chr8	+	4746	29	NNC	ENSMUSG00000036270.17	novel	4744	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	106607512	106619840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614956_106615042_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616880_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ENSMUSG00000036270.17_106607583_106619840_10	chr8	+	4679	29	NNC	ENSMUSG00000036270.17	novel	4744	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	106607582	106619840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612956_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614956_106615042_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ENSMUSG00000036270.17_106607583_106619840_2	chr8	+	4680	29	NNC	ENSMUSG00000036270.17	novel	4744	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	106607582	106619840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612724_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614956_106615042_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ENSMUSG00000036270.17_106607583_106619840_3	chr8	+	4678	29	NNC	ENSMUSG00000036270.17	novel	4744	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	106607582	106619840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614956_106615042_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618134_106618348_106618898_106619063_106619301
ENSMUSG00000036270.17_106607583_106619840_5	chr8	+	4680	29	NNC	ENSMUSG00000036270.17	novel	4744	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	106607582	106619840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614956_106615042_106615151_106615230_106615383_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ENSMUSG00000036270.17_106607583_106619840_6	chr8	+	4679	29	NNC	ENSMUSG00000036270.17	novel	4744	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	106607582	106619840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614956_106615042_106615151_106615230_106615388_106615735_106616173_106616262_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ENSMUSG00000036270.17_106607583_106619840_7	chr8	+	4680	29	NNC	ENSMUSG00000036270.17	novel	4744	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	106607582	106619840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106607791_106611132_106611285_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614956_106615042_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ENSMUSG00000036270.17_106607583_106619840_8	chr8	+	4685	29	FSM	ENSMUSG00000036270.17	ENST00000358933.10	4744	29	63	-4	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	106607582	106619840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614956_106615042_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ENSMUSG00000036275.14_52287255_52299085_1	chr11	+	2002	3	FSM	ENSMUSG00000036275.14	ENSMUST00000036952.5	2467	3	0	465	0	-465	multi-exon	FALSE	canonical	NA	NA	NA	NA	1825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGTGAGACTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	52287254	52299085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_52287431_52293872_52294385_52297771
ENSMUSG00000036275.14_52287255_52299145_1	chr11	+	2062	3	FSM	ENSMUSG00000036275.14	ENSMUST00000036952.5	2467	3	0	405	0	-405	multi-exon	FALSE	canonical	NA	NA	NA	NA	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGTTTAACAGTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	52287254	52299145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_52287431_52293872_52294385_52297771
ENSMUSG00000036275.14_52287362_52299185_1	chr11	+	1995	3	FSM	ENSMUSG00000036275.14	ENSMUST00000036952.5	2467	3	107	365	107	-365	multi-exon	FALSE	canonical	NA	NA	NA	NA	2483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCCCCAGCCACTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	52287361	52299185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_52287431_52293872_52294385_52297771
ENSMUSG00000036275.14_52294044_52299411_1	chr11	+	1981	2	ISM	ENSMUSG00000036275.14	ENSMUST00000036952.5	2467	3	6789	139	6789	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGACAGTTGACTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	52294043	52299411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_52294385_52297771
ENSMUSG00000036275.14_52294188_52299555_1	chr11	+	1980	2	NNC	ENSMUSG00000036275.14	novel	2472	3	NA	NA	6933	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTGTTAGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	52294187	52299555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_52294385_52297772
ENSMUSG00000036275.14_52294188_52299555_2	chr11	+	1981	2	ISM	ENSMUSG00000036275.14	ENSMUST00000109057.8	2472	3	6933	0	6933	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTGTTAGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	52294187	52299555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_52294385_52297771
ENSMUSG00000036285.11_77442029_77452061_1	chr5	-	639	4	ISM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	5870	0	5870	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTCCATGTATCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	77452061	77442028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77442404_77444932_77445051_77447504_77447622_77452032
ENSMUSG00000036285.11_77442216_77454158_1	chr5	-	593	5	ISM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	3773	187	3773	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGATGAGTGAGGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	77454158	77442215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77442404_77444932_77445051_77447504_77447622_77452032_77452165_77454120
ENSMUSG00000036285.11_77442273_77454223_1	chr5	-	601	5	ISM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	3708	244	3708	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGTGGCCTATAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	77454223	77442272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77442404_77444932_77445051_77447504_77447622_77452032_77452165_77454120
ENSMUSG00000036285.11_77442341_77454268_1	chr5	-	578	5	ISM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	3663	312	3663	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGCTCTGACTGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	77454268	77442340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77442404_77444932_77445051_77447504_77447622_77452032_77452165_77454120
ENSMUSG00000036285.11_77444997_77455490_1	chr5	-	597	5	ISM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	2441	2968	2441	-2968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTACATTAAAGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	77455490	77444996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77445051_77447504_77447622_77452032_77452165_77454120_77454324_77455399
ENSMUSG00000036285.11_77452032_77456787_1	chr5	-	535	4	ISM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	1144	10003	1144	-10003	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAAAATCTATGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	77456787	77452031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77452165_77454120_77454324_77455399_77455565_77456753
ENSMUSG00000036285.11_77452062_77456870_1	chr5	-	588	4	ISM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	1061	10033	1061	-10033	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGATAGCCCGAATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	77456870	77452061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77452165_77454120_77454324_77455399_77455565_77456753
ENSMUSG00000036285.11_77452132_77456932_1	chr5	-	580	4	ISM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	999	10103	999	-10103	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTTTGCCGACACATTC	NA	NA	NA	NA	NA	NA	NA	NA	77456932	77452131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77452165_77454120_77454324_77455399_77455565_77456753
ENSMUSG00000036285.11_77454216_77457060_1	chr5	-	580	3	ISM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	871	12187	871	-12187	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGCAAAAGCACCAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	77457060	77454215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77454324_77455399_77455565_77456753
ENSMUSG00000036285.11_77454287_77457135_1	chr5	-	584	3	ISM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	796	12258	796	-12258	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAAGTTCCCTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	77457135	77454286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77454324_77455399_77455565_77456753
ENSMUSG00000036285.11_77455514_77457289_1	chr5	-	587	2	ISM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	642	13485	642	-13485	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGTTCAAAAGACAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	77457289	77455513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_77455565_77456753
ENSMUSG00000036295.6_41503633_41535763_1	chr12	-	1277	2	FSM	ENSMUSG00000036295.6	ENST00000308478.10	3430	2	189	1964	189	-1964	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGACGCCTTGGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	41535763	41503632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_41504671_41535524
ENSMUSG00000036295.6_41503689_41535827_1	chr12	-	1285	2	FSM	ENSMUSG00000036295.6	ENST00000308478.10	3430	2	125	2020	125	-2020	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTGTCAAGCTTCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	41535827	41503688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_41504671_41535524
ENSMUSG00000036295.6_41503744_41535882_1	chr12	-	1285	2	FSM	ENSMUSG00000036295.6	ENST00000308478.10	3430	2	70	2075	70	-2075	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGATGCTTGGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	41535882	41503743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_41504671_41535524
ENSMUSG00000036299.6_75138971_75142781_1	chr18	+	724	3	FSM	ENSMUSG00000036299.6	ENSMUST00000040284.6	979	3	32	223	0	117	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGGAAACAGTGCCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	75138970	75142781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_75139086_75141721_75141898_75142348
ENSMUSG00000036299.6_75138971_75142830_1	chr18	+	773	3	FSM	ENSMUSG00000036299.6	ENSMUST00000040284.6	979	3	32	174	0	166	multi-exon	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCAGGCGCAGCGGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	75138970	75142830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_75139086_75141721_75141898_75142348
ENSMUSG00000036299.6_75138971_75142880_1	chr18	+	823	3	FSM	ENSMUSG00000036299.6	ENSMUST00000040284.6	979	3	32	124	0	-124	multi-exon	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGGAGAAGGAAGGACGG	NA	NA	NA	NA	NA	NA	NA	NA	75138970	75142880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_75139086_75141721_75141898_75142348
ENSMUSG00000036299.6_75139100_75141806_1	chr18	+	171	2	ISM	ENSMUSG00000036299.6	ENSMUST00000237263.2	1266	3	129	1417	129	-858	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATACATATACCCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	75139099	75141806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_75139186_75141721
ENSMUSG00000036299.6_75141720_75143004_1	chr18	+	834	2	ISM	ENSMUSG00000036299.6	ENSMUST00000040284.6	979	3	2781	0	2749	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCCTGCTTTTTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	75141719	75143004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_75141898_75142348
ENSMUSG00000036299.6_75141784_75143004_1	chr18	+	770	2	ISM	ENSMUSG00000036299.6	ENSMUST00000040284.6	979	3	2845	0	2813	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCCTGCTTTTTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	75141783	75143004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_75141898_75142348
ENSMUSG00000036306.14_69587708_69588724_1	chr8	-	622	2	ISM	ENSMUSG00000036306.14	ENST00000265801.6	1955	4	4984	0	4881	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTACAGCCTGTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	69588724	69587707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_69587746_69588140
ENSMUSG00000036306.14_69588296_69591148_1	chr8	-	661	2	ISM	ENSMUSG00000036306.14	ENSMUST00000037049.4	1800	3	2457	141	2457	32	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCCATGTACCAGCGCAA	NA	NA	NA	NA	NA	NA	NA	NA	69591148	69588295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_69588812_69591003
ENSMUSG00000036306.14_69588328_69593605_1	chr8	-	230	2	FSM	ENSMUSG00000036306.14	ENST00000616228.1	230	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTACCAAAGGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	69593605	69588327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_69588404_69593451
ENSMUSG00000036306.14_69588609_69593605_1	chr8	-	1346	3	FSM	ENSMUSG00000036306.14	ENSMUST00000037049.4	1800	3	0	454	0	-281	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGAACTGCAGCGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	69593605	69588608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_69588812_69591003_69591802_69593260
ENSMUSG00000036306.14_69588728_69593711_1	chr8	-	1333	3	FSM	ENSMUSG00000036306.14	ENSMUST00000037049.4	1800	3	-106	573	-3	-400	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCAGTCTGAAGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	69593711	69588727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_69588812_69591003_69591802_69593260
ENSMUSG00000036306.14_69591074_69636753_1	chr8	-	1334	3	ISM	ENSMUSG00000036306.14	ENSMUST00000185176.8	5019	4	124	5753	124	-2746	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGCTGAGGTCCTACG	NA	NA	NA	NA	NA	NA	NA	NA	69636753	69591073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_69591802_69593260_69593739_69636625
ENSMUSG00000036306.14_69591145_69636857_1	chr8	-	1367	3	ISM	ENSMUSG00000036306.14	ENSMUST00000185176.8	5019	4	20	5824	20	-2817	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGCAGCAGGAGAAACG	NA	NA	NA	NA	NA	NA	NA	NA	69636857	69591144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_69591802_69593260_69593739_69636625
ENSMUSG00000036309.15_52122822_52136973_1	chr11	+	742	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	-14	712	-14	-189	multi-exon	FALSE	canonical	NA	NA	NA	NA	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTCCAGATCAGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	52122821	52136973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ENSMUSG00000036309.15_52123161_52137534_1	chr11	+	1458	6	FSM	ENSMUSG00000036309.15	ENSMUST00000109072.2	1754	6	145	151	145	-151	multi-exon	FALSE	canonical	NA	NA	NA	NA	4017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTGGAGAAACACTACTT	NA	NA	NA	NA	NA	NA	NA	NA	52123160	52137534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_52123440_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ENSMUSG00000036309.15_52123267_52137583_1	chr11	+	1401	6	FSM	ENSMUSG00000036309.15	ENSMUST00000109072.2	1754	6	251	102	251	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	4781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAGTGTATGGTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	52123266	52137583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_52123440_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ENSMUSG00000036309.15_52123342_52137685_1	chr11	+	1428	6	FSM	ENSMUSG00000036309.15	ENSMUST00000109072.2	1754	6	326	0	326	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGTTTCTTAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	52123341	52137685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_52123440_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ENSMUSG00000036309.15_52127691_52137085_1	chr11	+	703	5	ISM	ENSMUSG00000036309.15	ENSMUST00000109072.2	1754	6	4675	600	27	-77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTTTCCCTTTCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	52127690	52137085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ENSMUSG00000036309.15_52135834_52137348_1	chr11	+	652	2	ISM	ENSMUSG00000036309.15	ENST00000521216.5	808	5	8170	-186	8170	186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTTTTTTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	52135833	52137348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_52135949_52136811
ENSMUSG00000036315.14_37265250_37269374_1	chr17	-	659	5	FSM	ENSMUSG00000036315.14	ENSMUST00000172518.8	710	5	51	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGATGTTATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	37269374	37265249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040_37269189_37269269
ENSMUSG00000036323.15_77124285_77135801_1	chr5	+	764	8	ISM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	1755	11983	1731	-10411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATAGAGTTTAACAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	77124284	77135801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713
ENSMUSG00000036323.15_77126449_77146212_1	chr5	+	1738	15	NNC	ENSMUSG00000036323.15	novel	1744	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1037	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGACAGTGTACTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	77126448	77146212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_77126551_77128134_77128273_77128361_77128508_77131964_77132090_77132180_77132239_77135713_77135850_77137156_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143788_77145269_77145430_77146038
ENSMUSG00000036323.15_77126449_77146212_2	chr5	+	1745	15	NNC	ENSMUSG00000036323.15	novel	1744	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	968	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGACAGTGTACTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	77126448	77146212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_77126554_77128134_77128279_77128361_77128508_77131964_77132090_77132180_77132239_77135713_77135850_77137156_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143626_77143788_77145269_77145430_77146038
ENSMUSG00000036323.15_77126449_77146212_3	chr5	+	1748	15	NNC	ENSMUSG00000036323.15	novel	1744	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	844	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGACAGTGTACTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	77126448	77146212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_77126554_77128134_77128279_77128361_77128508_77131964_77132090_77132180_77132239_77135713_77135846_77137151_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143788_77145269_77145430_77146038
ENSMUSG00000036323.15_77126449_77146212_4	chr5	+	1738	15	NNC	ENSMUSG00000036323.15	novel	1744	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	819	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGACAGTGTACTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	77126448	77146212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_77126554_77128134_77128279_77128361_77128508_77131964_77132090_77132180_77132239_77135713_77135850_77137156_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143788_77145269_77145430_77146047
ENSMUSG00000036323.15_77126449_77146212_5	chr5	+	1747	15	NIC	ENSMUSG00000036323.15	novel	1744	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGACAGTGTACTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	77126448	77146212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_+_77126554_77128134_77128279_77128361_77128508_77131964_77132090_77132180_77132239_77135713_77135850_77137156_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143788_77145269_77145430_77146038
ENSMUSG00000036323.15_77126449_77146212_6	chr5	+	1739	15	NNC	ENSMUSG00000036323.15	novel	1744	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGACAGTGTACTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	77126448	77146212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_77126554_77128134_77128279_77128361_77128508_77131964_77132090_77132188_77132239_77135713_77135850_77137156_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143788_77145269_77145430_77146038
ENSMUSG00000036323.15_77126477_77137240_1	chr5	+	773	8	ISM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	3947	10544	28	-8972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGCAGCATACAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	77126476	77137240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147
ENSMUSG00000036323.15_77128197_77139868_1	chr5	+	775	9	ISM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	5667	7916	1748	-6344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGAGGAGCTGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	77128196	77139868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836
ENSMUSG00000036323.15_77128426_77142057_1	chr5	+	731	9	ISM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	5896	5727	1977	-4155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATCCAGTGGTACCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	77128425	77142057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988
ENSMUSG00000036323.15_77137171_77145368_1	chr5	+	797	9	ISM	ENSMUSG00000036323.15	ENSMUST00000120550.2	2297	17	14617	1295	10722	-844	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAGGACCAGATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	77137170	77145368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269
ENSMUSG00000036323.15_77139838_77146188_1	chr5	+	828	8	ISM	ENSMUSG00000036323.15	ENSMUST00000120550.2	2297	17	17284	475	13389	-24	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAGGAGGGAAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	77139837	77146188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
ENSMUSG00000036327.19_26099137_26104076_1	chr2	-	2419	2	ISM	ENSMUSG00000036327.19	ENSMUST00000091263.12	4011	9	11307	488	11307	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTCAGTTTTTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	26104076	26099136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26101472_26103992
ENSMUSG00000036327.19_26099137_26111028_1	chr2	-	1556	7	ISM	ENSMUSG00000036327.19	ENSMUST00000036187.9	2559	13	16509	0	4355	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTCAGTTTTTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	26111028	26099136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26099806_26101285_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920
ENSMUSG00000036327.19_26099288_26104151_1	chr2	-	2343	2	ISM	ENSMUSG00000036327.19	ENSMUST00000091263.12	4011	9	11232	639	11232	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGTTTATTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	26104151	26099287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26101472_26103992
ENSMUSG00000036327.19_26100189_26115223_1	chr2	-	2311	9	FSM	ENSMUSG00000036327.19	ENSMUST00000091263.12	4011	9	160	1540	160	-1052	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAACTTGTGCCTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	26115223	26100188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160
ENSMUSG00000036327.19_26100231_26115383_1	chr2	-	2429	9	FSM	ENSMUSG00000036327.19	ENSMUST00000091263.12	4011	9	0	1582	0	-1094	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAACAACATCAACTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	26115383	26100230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160
ENSMUSG00000036330.13_69492980_69518266_1	chr8	-	526	8	ISM	ENSMUSG00000036330.13	ENST00000519026.5	1237	12	8297	88	8297	-88	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGGTCATCATTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	69518266	69492979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_69493027_69493233_69493354_69493629_69493694_69495365_69495418_69496576_69496656_69504104_69504166_69517945_69517990_69518207
ENSMUSG00000036330.13_69493629_69520879_1	chr8	-	568	8	ISM	ENSMUSG00000036330.13	ENST00000519026.5	1237	12	5684	737	5684	-737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGTGCTCTCAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	69520879	69493628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_69493694_69495365_69495418_69496576_69496656_69504104_69504166_69517945_69517990_69518207_69518298_69519791_69519885_69520795
ENSMUSG00000036330.13_69495363_69524775_1	chr8	-	567	8	ISM	ENSMUSG00000036330.13	ENST00000519026.5	1237	12	1788	2471	1788	-2471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAGACCCAGTTGATA	NA	NA	NA	NA	NA	NA	NA	NA	69524775	69495362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_69495418_69496576_69496656_69504104_69504166_69517945_69517990_69518207_69518298_69519791_69519885_69520795_69520880_69524714
ENSMUSG00000036330.13_69496606_69526289_1	chr8	-	563	8	ISM	ENSMUSG00000036330.13	ENST00000519026.5	1237	12	274	3714	274	-3714	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGTGTTGGCCAACAA	NA	NA	NA	NA	NA	NA	NA	NA	69526289	69496605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_69496656_69504104_69504166_69517945_69517990_69518207_69518298_69519791_69519885_69520795_69520880_69524714_69524774_69526207
ENSMUSG00000036330.13_69518272_69526471_1	chr8	-	526	5	ISM	ENSMUSG00000036330.13	ENST00000519026.5	1237	12	92	25380	92	-25380	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAATTTGTGGGCAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	69526471	69518271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_69518298_69519791_69519885_69520795_69520880_69524714_69524774_69526207
ENSMUSG00000036333.12_25040698_25047322_1	chr12	+	465	4	ISM	ENSMUSG00000036333.12	ENST00000473731.5	5271	28	8440	60519	8440	-60519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCAGGTATGTGCGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	25040697	25047322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_25040774_25042208_25042308_25044810_25045009_25047230
ENSMUSG00000036333.12_25042217_25049282_1	chr12	+	510	5	ISM	ENSMUSG00000036333.12	ENST00000473731.5	5271	28	9959	58559	9959	-58559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCCACCAAGATGAGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	25042216	25049282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259
ENSMUSG00000036333.12_25060151_25063364_1	chr12	+	463	4	ISM	ENSMUSG00000036333.12	ENST00000473731.5	5271	28	27893	44477	27893	-44477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTACTGAGGATTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	25060150	25063364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_25060212_25060893_25061138_25061498_25061588_25063295
ENSMUSG00000036333.12_25086575_25101186_1	chr12	+	491	4	ISM	ENSMUSG00000036333.12	ENST00000473731.5	5271	28	54317	6655	54317	-6655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCATGCTGCCTCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	25086574	25101186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_25086632_25088322_25088550_25090454_25090569_25101093
ENSMUSG00000036333.12_25088492_25103895_1	chr12	+	502	5	ISM	ENSMUSG00000036333.12	ENST00000473731.5	5271	28	56234	3946	56234	-3946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCGCACTTCTCACAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	25088491	25103895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796
ENSMUSG00000036333.12_25101156_25106644_1	chr12	+	470	4	ISM	ENSMUSG00000036333.12	ENST00000473731.5	5271	28	68898	1197	68898	-1197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGCTTACTGATAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	25101155	25106644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_25101226_25102795_25102895_25103796_25104034_25106580
ENSMUSG00000036352.17_25888555_25904977_1	chr2	-	1380	8	ISM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	6782	0	6782	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTACTTCATGGC	NA	NA	NA	NA	NA	NA	NA	NA	25904977	25888554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903
ENSMUSG00000036352.17_25888707_25906324_1	chr2	-	1245	9	ISM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	5435	152	5435	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACTTGAATTGACCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	25906324	25888706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307
ENSMUSG00000036352.17_25888707_25906428_1	chr2	-	1349	9	ISM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	5331	152	5331	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACTTGAATTGACCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	25906428	25888706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307
ENSMUSG00000036352.17_25888818_25911586_1	chr2	-	1416	10	FSM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	173	263	173	-263	multi-exon	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTTGCAGTCCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	25911586	25888817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
ENSMUSG00000036352.17_25889008_25911759_1	chr2	-	1399	10	FSM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	0	453	0	-453	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCAGATCTCTAGGATC	NA	NA	NA	NA	NA	NA	NA	NA	25911759	25889007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
ENSMUSG00000036356.16_68810906_68826253_1	chr8	-	700	4	ISM	ENSMUSG00000036356.16	ENSMUST00000130214.8	3029	11	361513	287	361513	-287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGCAAATGATCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	68826253	68810905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_68811366_68814719_68814802_68825271_68825367_68826190
ENSMUSG00000036356.16_68810995_68826337_1	chr8	-	695	4	ISM	ENSMUSG00000036356.16	ENSMUST00000130214.8	3029	11	361429	376	361429	-376	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTATCTGACTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	68826337	68810994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_68811366_68814719_68814802_68825271_68825367_68826190
ENSMUSG00000036356.16_68811098_68841311_1	chr8	-	688	5	ISM	ENSMUSG00000036356.16	ENSMUST00000130214.8	3029	11	346455	479	346455	-479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCCAGCAGTAAAAAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	68841311	68811097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_68811366_68814719_68814802_68825271_68825367_68826190_68826370_68841247
ENSMUSG00000036356.16_68811259_68854107_1	chr8	-	718	6	ISM	ENSMUSG00000036356.16	ENSMUST00000130214.8	3029	11	333659	640	333659	-640	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCACCTGTGGCATGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	68854107	68811258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_68811366_68814719_68814802_68825271_68825367_68826190_68826370_68841247_68841350_68853954
ENSMUSG00000036356.16_68825313_68913747_1	chr8	-	724	5	ISM	ENSMUSG00000036356.16	ENSMUST00000130214.8	3029	11	274019	14694	274019	-14694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCCATCACGATGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	68913747	68825312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_68825367_68826190_68826370_68841247_68841350_68853954_68854172_68913575
ENSMUSG00000036356.16_68826296_68913880_1	chr8	-	698	4	ISM	ENSMUSG00000036356.16	ENSMUST00000130214.8	3029	11	273886	15677	273886	-15677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCGCTTCTGGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	68913880	68826295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_68826370_68841247_68841350_68853954_68854172_68913575
ENSMUSG00000036356.16_68854004_68914103_1	chr8	-	696	2	ISM	ENSMUSG00000036356.16	ENSMUST00000130214.8	3029	11	273663	43385	273663	-43385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGCGAGGAGGGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	68914103	68854003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_68854172_68913575
ENSMUSG00000036356.16_68854076_68914178_1	chr8	-	699	2	ISM	ENSMUSG00000036356.16	ENSMUST00000130214.8	3029	11	273588	43457	273588	-43457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGGCCCCATCATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	68914178	68854075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_68854172_68913575
ENSMUSG00000036356.16_68854119_68914246_1	chr8	-	724	2	ISM	ENSMUSG00000036356.16	ENSMUST00000130214.8	3029	11	273520	43500	273520	-43500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGACCACAAGCATGAATT	NA	NA	NA	NA	NA	NA	NA	NA	68914246	68854118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_68854172_68913575
ENSMUSG00000036356.16_68913895_69009729_1	chr8	-	715	2	ISM	ENSMUSG00000036356.16	ENSMUST00000130214.8	3029	11	178037	103276	178037	-103276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCTCAGGCTGGGACCG	NA	NA	NA	NA	NA	NA	NA	NA	69009729	68913894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_68914504_69009623
ENSMUSG00000036356.16_68914006_69098507_1	chr8	-	704	3	ISM	ENSMUSG00000036356.16	ENSMUST00000130214.8	3029	11	89259	103387	89259	-103387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAACTATGTGAATAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	69098507	68914005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_68914504_69009623_69009773_69098450
ENSMUSG00000036356.16_68914063_69098564_1	chr8	-	704	3	ISM	ENSMUSG00000036356.16	ENSMUST00000130214.8	3029	11	89202	103444	89202	-103444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCCACAGGCAAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	69098564	68914062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_68914504_69009623_69009773_69098450
ENSMUSG00000036368.9_79928783_79959230_1	chr17	+	697	3	ISM	ENSMUSG00000036368.9	ENST00000354545.8	1276	9	50	29910	50	-29910	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAATTCGTCAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	79928782	79959230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_79929202_79957730_79957906_79959127
ENSMUSG00000036368.9_79929062_79975437_1	chr17	+	613	6	ISM	ENSMUSG00000036368.9	ENST00000354545.8	1276	9	329	13703	329	-13703	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAAGGTACTGTTATACA	NA	NA	NA	NA	NA	NA	NA	NA	79929061	79975437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_79929202_79957730_79957906_79959127_79959231_79966841_79966903_79974299_79974376_79975379
ENSMUSG00000036368.9_79929199_79978084_1	chr17	+	595	7	ISM	ENSMUSG00000036368.9	ENST00000354545.8	1276	9	466	11056	466	-11056	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTTGTCTGTCACGTG	NA	NA	NA	NA	NA	NA	NA	NA	79929198	79978084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_79929202_79957730_79957906_79959127_79959231_79966841_79966903_79974299_79974376_79975379_79975458_79977985
ENSMUSG00000036368.9_79934098_79989140_1	chr17	+	941	9	FSM	ENSMUSG00000036368.9	ENST00000417700.6	941	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATACCGTCTTCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	79934097	79989140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_79934232_79957730_79957906_79959127_79959231_79966841_79966903_79974299_79974376_79975379_79975458_79977985_79978085_79979866_79980003_79989061
ENSMUSG00000036371.7_67243995_67254922_1	chr6	+	1061	6	ISM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	28	6368	0	-6076	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGTTAAAATTGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	67243994	67254922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744
ENSMUSG00000036371.7_67244055_67254765_1	chr6	+	817	6	ISM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	60	6530	0	-6233	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGAAGAGGGTCCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	67244054	67254765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744
ENSMUSG00000036371.7_67244241_67261052_1	chr6	+	1155	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	274	238	186	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGTCATTCATACCATT	NA	NA	NA	NA	NA	NA	NA	NA	67244240	67261052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUSG00000036371.7_67244314_67258787_1	chr6	+	871	7	ISM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	319	2508	259	-2211	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCAGGACTGATAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	67244313	67258787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631
ENSMUSG00000036371.7_67248236_67260998_1	chr6	+	867	7	ISM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	4241	297	4181	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGCTTAAGGATCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	67248235	67260998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUSG00000036371.7_67248863_67261298_1	chr6	+	1105	6	ISM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	4896	-8	4808	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCACTTCATTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	67248862	67261298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUSG00000036371.7_67249123_67261298_1	chr6	+	929	5	ISM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	5128	-3	5068	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCACTTCATTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	67249122	67261298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUSG00000036390.9_67012080_67014288_1	chr6	-	1121	4	FSM	ENSMUSG00000036390.9	ENSMUST00000043098.9	1223	4	102	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTTCTCAACGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	67014288	67012079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_67012757_67013661_67013900_67013993_67014096_67014184
ENSMUSG00000036390.9_67012450_67014348_1	chr6	-	471	2	FSM	ENSMUSG00000036390.9	ENST00000648742.1	431	2	-40	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAGAAAAGAGAAATCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	67014348	67012449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_67012757_67014184
ENSMUSG00000036398.14_37259248_37260877_1	chr17	-	1308	2	ISM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	1728	0	1728	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGTGTTAAATACAGGC	NA	NA	NA	NA	NA	NA	NA	NA	37260877	37259247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_37260447_37260768
ENSMUSG00000036398.14_37259392_37262459_1	chr17	-	1309	3	FSM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	146	144	146	-144	multi-exon	FALSE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCCTCCCCGGCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	37262459	37259391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_37260447_37260768_37260878_37262314
ENSMUSG00000036402.14_66873415_66996250_1	chr6	+	2130	5	FSM	ENSMUSG00000036402.14	ENSMUST00000043148.13	4248	5	34	2084	0	180	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACACCTGCTCAGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	66873414	66996250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_66873512_66891436_66891495_66920808_66920862_66992708_66992828_66994447
ENSMUSG00000036411.11_22322935_22355502_1	chr9	+	1477	6	NNC	ENSMUSG00000036411.11	novel	1407	6	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGCTGAAAAACCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	22322934	22355502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_22323046_22335409_22336104_22342971_22343105_22346390_22346697_22351162_22351261_22355367
ENSMUSG00000036411.11_22322935_22355502_2	chr9	+	1476	6	NNC	ENSMUSG00000036411.11	novel	1407	6	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGCTGAAAAACCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	22322934	22355502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_22323046_22335408_22336104_22342971_22343105_22346390_22346697_22351164_22351261_22355367
ENSMUSG00000036411.11_22322935_22355502_3	chr9	+	1478	6	FSM	ENSMUSG00000036411.11	ENST00000317020.10	1407	6	-71	0	-71	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGCTGAAAAACCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	22322934	22355502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_22323046_22335408_22336104_22342971_22343105_22346390_22346697_22351162_22351261_22355367
ENSMUSG00000036411.11_22322935_22355502_4	chr9	+	1471	6	NNC	ENSMUSG00000036411.11	novel	1407	6	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGCTGAAAAACCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	22322934	22355502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_22323046_22335408_22336104_22342978_22343105_22346390_22346697_22351162_22351261_22355367
ENSMUSG00000036427.6_33900755_33929761_2	chr7	-	2875	18	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTAGGGTTTTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	33929761	33900754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928716_33928799_33929516
ENSMUSG00000036427.6_33900755_33929761_3	chr7	-	2879	18	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTAGGGTTTTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	33929761	33900754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_33901973_33902057_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907729_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ENSMUSG00000036427.6_33900755_33929761_4	chr7	-	2880	18	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTAGGGTTTTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	33929761	33900754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_33901973_33902057_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907178_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ENSMUSG00000036427.6_33900755_33929761_5	chr7	-	2877	18	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTAGGGTTTTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	33929761	33900754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_33901968_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ENSMUSG00000036427.6_33900755_33929761_6	chr7	-	2877	18	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTAGGGTTTTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	33929761	33900754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915428_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ENSMUSG00000036427.6_33900755_33929761_8	chr7	-	2878	18	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTAGGGTTTTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	33929761	33900754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928416_33928707_33928799_33929516
ENSMUSG00000036427.6_33900755_33929761_9	chr7	-	2876	18	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2731	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTAGGGTTTTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	33929761	33900754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905062_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ENSMUSG00000036437.7_67150074_67157916_1	chr8	+	738	4	NNC	ENSMUSG00000036437.7	novel	746	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGGGGGAACGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	67150073	67157916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_67150175_67156443_67156476_67157201_67157278_67157387
ENSMUSG00000036437.7_67150074_67157916_3	chr8	+	747	4	FSM	ENSMUSG00000036437.7	ENST00000509586.5	746	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGGGGGAACGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	67150073	67157916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_67150175_67156434_67156476_67157201_67157278_67157387
ENSMUSG00000036438.15_87740840_87754276_1	chr17	-	1157	6	FSM	ENSMUSG00000036438.15	ENST00000456319.6	1160	6	20	-17	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	87754276	87740839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750186_87754212
ENSMUSG00000036438.15_87741298_87743312_1	chr17	-	523	4	ISM	ENSMUSG00000036438.15	ENSMUST00000234406.2	842	5	10972	205	10972	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTGTCATTGTCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	87743312	87741297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218
ENSMUSG00000036438.15_87741363_87743362_1	chr17	-	508	4	ISM	ENSMUSG00000036438.15	ENSMUST00000234406.2	842	5	10922	270	10922	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGTCAAAAAATATGCA	NA	NA	NA	NA	NA	NA	NA	NA	87743362	87741362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218
ENSMUSG00000036438.15_87741363_87754276_1	chr17	-	397	5	FSM	ENSMUSG00000036438.15	ENST00000628793.2	1062	5	115	550	8	-270	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGTCAAAAAATATGCA	NA	NA	NA	NA	NA	NA	NA	NA	87754276	87741362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_87741484_87742503_87742562_87743231_87743363_87750123_87750155_87754220
ENSMUSG00000036438.15_87741363_87754276_2	chr17	-	595	6	FSM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	87	523	8	-270	multi-exon	FALSE	canonical	NA	NA	NA	NA	3345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGTCAAAAAATATGCA	NA	NA	NA	NA	NA	NA	NA	NA	87754276	87741362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
ENSMUSG00000036438.15_87742504_87754276_1	chr17	-	451	4	NIC	ENSMUSG00000036438.15	novel	1160	6	NA	NA	8	-1411	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCACAAGGGCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	87754276	87742503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_-_87742640_87743031_87743139_87743218_87743363_87754212
ENSMUSG00000036438.15_87742504_87754276_2	chr17	-	474	5	ISM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	87	1664	8	-1411	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCACAAGGGCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	87754276	87742503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
ENSMUSG00000036461.17_79773804_79817908_1	chr14	+	1455	8	FSM	ENSMUSG00000036461.17	ENST00000625359.1	1814	8	47	312	47	-312	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGGGCAGTGTGGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	79773803	79817908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_79773863_79798186_79798368_79802901_79803013_79804658_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
ENSMUSG00000036461.17_79773831_79818018_1	chr14	+	1538	8	FSM	ENSMUSG00000036461.17	ENST00000625359.1	1814	8	74	202	74	-202	multi-exon	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATCAAAGCTCAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	79773830	79818018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_79773863_79798186_79798368_79802901_79803013_79804658_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
ENSMUSG00000036461.17_79798183_79818024_1	chr14	+	1516	7	ISM	ENSMUSG00000036461.17	ENST00000625359.1	1814	8	24426	196	24426	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGCTCAGGAAACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	79798182	79818024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_79798368_79802901_79803013_79804658_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
ENSMUSG00000036461.17_79798290_79818099_1	chr14	+	1480	7	NNC	ENSMUSG00000036461.17	novel	1814	8	NA	NA	24533	-121	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGCCCAGCAGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	79798289	79818099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_79798368_79802901_79803013_79804658_79804755_79806664_79806745_79808162_79808356_79810611_79811059_79817624
ENSMUSG00000036461.17_79802899_79818220_1	chr14	+	1530	6	ISM	ENSMUSG00000036461.17	ENST00000625359.1	1814	8	29142	0	29142	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTATGGGTGGGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	79802898	79818220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_79803013_79804658_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
ENSMUSG00000036466.18_64413372_64614942_1	chr9	+	3849	22	FSM	ENSMUSG00000036466.18	ENST00000409699.6	5570	22	64	1657	64	370	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATAGATGGTGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	64413371	64614942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008_64613216_64613808_64614796_64614894
ENSMUSG00000036466.18_64416063_64615063_1	chr9	+	3857	21	ISM	ENSMUSG00000036466.18	ENST00000409699.6	5570	22	2755	1536	2755	491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATGTAAAACAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	64416062	64615063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008_64613216_64613808_64614796_64614894
ENSMUSG00000036466.18_64547296_64615355_1	chr9	+	3781	18	ISM	ENSMUSG00000036466.18	ENST00000288745.7	5352	21	133989	1126	133988	783	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGTTTACAGAAGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	64547295	64615355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008_64613216_64613808_64614796_64614894
ENSMUSG00000036466.18_64547328_64615425_1	chr9	+	3819	18	ISM	ENSMUSG00000036466.18	ENST00000288745.7	5352	21	134021	1056	134020	853	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTTGAGTAGTAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	64547327	64615425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008_64613216_64613808_64614796_64614894
ENSMUSG00000036466.18_64547377_64615486_1	chr9	+	3831	18	ISM	ENSMUSG00000036466.18	ENST00000288745.7	5352	21	134070	995	134069	914	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTCCAGGCATAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	64547376	64615486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008_64613216_64613808_64614796_64614894
ENSMUSG00000036466.18_64555191_64615607_1	chr9	+	3818	17	ISM	ENSMUSG00000036466.18	ENST00000288745.7	5352	21	141884	874	141883	-874	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAAATATTGGTAGACC	NA	NA	NA	NA	NA	NA	NA	NA	64555190	64615607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008_64613216_64613808_64614796_64614894
ENSMUSG00000036466.18_64560432_64615751_1	chr9	+	3839	16	ISM	ENSMUSG00000036466.18	ENST00000288745.7	5352	21	147125	730	147124	-730	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAAGCAGAAATGGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	64560431	64615751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008_64613216_64613808_64614796_64614894
ENSMUSG00000036466.18_64567741_64615919_1	chr9	+	3755	15	ISM	ENSMUSG00000036466.18	ENST00000288745.7	5352	21	154434	562	154433	-562	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAAGTCAAGAGAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	64567740	64615919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008_64613216_64613808_64614796_64614894
ENSMUSG00000036466.18_64567741_64615962_1	chr9	+	3798	15	ISM	ENSMUSG00000036466.18	ENST00000288745.7	5352	21	154434	519	154433	-519	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTTCGGGCTCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	64567740	64615962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008_64613216_64613808_64614796_64614894
ENSMUSG00000036466.18_64586499_64616082_1	chr9	+	3824	14	ISM	ENSMUSG00000036466.18	ENST00000288745.7	5352	21	173192	399	173191	-399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCTATACAGAGAAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	64586498	64616082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008_64613216_64613808_64614796_64614894
ENSMUSG00000036466.18_64586554_64616134_1	chr9	+	3821	14	ISM	ENSMUSG00000036466.18	ENST00000288745.7	5352	21	173247	347	173246	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGCCTTCACATAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	64586553	64616134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008_64613216_64613808_64614796_64614894
ENSMUSG00000036466.18_64587621_64616290_1	chr9	+	3844	13	ISM	ENSMUSG00000036466.18	ENST00000288745.7	5352	21	174314	191	174313	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTTCAAAACAAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	64587620	64616290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008_64613216_64613808_64614796_64614894
ENSMUSG00000036466.18_64593158_64616487_1	chr9	+	3883	11	ISM	ENSMUSG00000036466.18	ENST00000288745.7	5352	21	179851	-6	179850	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGCCTACTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	64593157	64616487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008_64613216_64613808_64614796_64614894
ENSMUSG00000036466.18_64593696_64616599_1	chr9	+	3793	10	ISM	ENSMUSG00000036466.18	ENST00000409699.6	5570	22	180388	0	180388	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACAATACATGTTAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	64593695	64616599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008_64613216_64613808_64614796_64614894
ENSMUSG00000036478.9_96453143_96454677_1	chr10	+	732	2	FSM	ENSMUSG00000036478.9	ENSMUST00000038377.9	5001	2	275	3994	-273	147	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATTTAGTGACAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	96453142	96454677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_96453335_96454137
ENSMUSG00000036480.10_87111915_87114756_1	chr1	+	1211	9	ISM	ENSMUSG00000036480.10	ENST00000617714.2	1885	11	47	1366	47	-1366	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGTTATACTCAGGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	87111914	87114756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87111985_87112324_87112379_87112474_87112665_87113045_87113146_87113231_87113392_87113615_87113759_87113992_87114156_87114296_87114477_87114605
ENSMUSG00000036480.10_87111965_87114810_1	chr1	+	1215	9	ISM	ENSMUSG00000036480.10	ENST00000617714.2	1885	11	97	1312	97	-1312	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGAATCATGTAACCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	87111964	87114810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87111985_87112324_87112379_87112474_87112665_87113045_87113146_87113231_87113392_87113615_87113759_87113992_87114156_87114296_87114477_87114605
ENSMUSG00000036480.10_87112323_87115326_1	chr1	+	1316	9	ISM	ENSMUSG00000036480.10	ENST00000617714.2	1885	11	455	796	455	-796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCCCAGGCTGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	87112322	87115326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87112379_87112474_87112665_87113045_87113146_87113231_87113392_87113615_87113759_87113992_87114156_87114296_87114477_87114605_87114821_87115217
ENSMUSG00000036480.10_87112517_87115689_1	chr1	+	1239	9	ISM	ENSMUSG00000036480.10	ENST00000617714.2	1885	11	649	433	649	-433	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACTGACAGGACTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	87112516	87115689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87112665_87113045_87113146_87113231_87113392_87113615_87113759_87113992_87114156_87114296_87114477_87114605_87114821_87115217_87115325_87115666
ENSMUSG00000036480.10_87112593_87115723_1	chr1	+	1197	9	ISM	ENSMUSG00000036480.10	ENST00000617714.2	1885	11	725	399	725	-399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTTTGGGGGACCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	87112592	87115723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87112665_87113045_87113146_87113231_87113392_87113615_87113759_87113992_87114156_87114296_87114477_87114605_87114821_87115217_87115325_87115666
ENSMUSG00000036480.10_87112642_87115775_1	chr1	+	1200	9	ISM	ENSMUSG00000036480.10	ENST00000617714.2	1885	11	774	347	774	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCACACTGGCTCATAGT	NA	NA	NA	NA	NA	NA	NA	NA	87112641	87115775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87112665_87113045_87113146_87113231_87113392_87113615_87113759_87113992_87114156_87114296_87114477_87114605_87114821_87115217_87115325_87115666
ENSMUSG00000036480.10_87113045_87115904_1	chr1	+	1307	8	ISM	ENSMUSG00000036480.10	ENST00000617714.2	1885	11	1177	218	1177	-218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCGCCAGGGCCAACTC	NA	NA	NA	NA	NA	NA	NA	NA	87113044	87115904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87113146_87113231_87113392_87113615_87113759_87113992_87114156_87114296_87114477_87114605_87114821_87115217_87115325_87115666
ENSMUSG00000036480.10_87113614_87116127_1	chr1	+	1271	6	ISM	ENSMUSG00000036480.10	ENST00000617714.2	1885	11	1746	-5	1746	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAAATCTGGAGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	87113613	87116127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87113759_87113992_87114156_87114296_87114477_87114605_87114821_87115217_87115325_87115666
ENSMUSG00000036500.5_87052730_87054870_1	chr1	+	1204	9	ISM	ENSMUSG00000036500.5	ENST00000392027.3	1483	11	-16	574	0	-574	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGTCAATTACGTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	87052729	87054870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87052797_87052879_87052997_87053113_87053230_87053348_87053524_87053601_87053775_87054031_87054167_87054247_87054321_87054449_87054585_87054657
ENSMUSG00000036500.5_87052910_87055098_1	chr1	+	1133	9	ISM	ENSMUSG00000036500.5	ENST00000392027.3	1483	11	164	346	164	-346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATGGCAACGGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	87052909	87055098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87052997_87053113_87053230_87053348_87053524_87053601_87053775_87054031_87054167_87054247_87054321_87054449_87054585_87054657_87054850_87055051
ENSMUSG00000036500.5_87053200_87055367_1	chr1	+	1152	9	ISM	ENSMUSG00000036500.5	ENST00000392027.3	1483	11	454	77	454	-77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	982	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGAACTACATCGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	87053199	87055367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87053230_87053348_87053524_87053601_87053775_87054031_87054167_87054247_87054321_87054449_87054585_87054657_87054850_87055051_87055175_87055251
ENSMUSG00000036500.5_87053347_87055367_1	chr1	+	1115	8	ISM	ENSMUSG00000036500.5	ENSMUST00000044878.4	1680	11	617	267	601	-77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	829	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGAACTACATCGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	87053346	87055367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87053524_87053601_87053775_87054031_87054167_87054247_87054321_87054449_87054585_87054657_87054850_87055051_87055166_87055251
ENSMUSG00000036500.5_87053347_87055367_2	chr1	+	1124	8	ISM	ENSMUSG00000036500.5	ENST00000392027.3	1483	11	601	77	601	-77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	876	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGAACTACATCGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	87053346	87055367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_87053524_87053601_87053775_87054031_87054167_87054247_87054321_87054449_87054585_87054657_87054850_87055051_87055175_87055251
ENSMUSG00000036502.15_37287177_37296938_1	chrX	-	1409	2	ISM	ENSMUSG00000036502.15	ENSMUST00000089054.11	3311	9	44378	994	44368	-988	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGCCTTCACTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	37296938	37287176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_37288534_37296886
ENSMUSG00000036502.15_37287538_37334624_1	chrX	-	1394	6	ISM	ENSMUSG00000036502.15	ENST00000440464.5	3143	7	6785	1349	6682	-1349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTAGATTGGATCGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	37334624	37287537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_37288534_37296886_37297031_37315764_37315834_37321979_37322070_37324717_37324781_37334592
ENSMUSG00000036502.15_37287686_37341161_1	chrX	-	1398	7	FSM	ENSMUSG00000036502.15	ENST00000440464.5	3143	7	248	1497	145	-1497	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAACATGTGTGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	37341161	37287685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_37288534_37296886_37297031_37315764_37315834_37321979_37322070_37324717_37324781_37334592_37334736_37341120
ENSMUSG00000036503.14_57671771_57740955_1	chr3	+	749	9	ISM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	28288	1697	28230	302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCCAGTCTGCAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	57671770	57740955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ENSMUSG00000036503.14_57686886_57741163_1	chr3	+	761	7	ISM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	43403	1489	43345	510	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGACCGACAGCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	57686885	57741163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ENSMUSG00000036503.14_57709868_57741309_1	chr3	+	775	5	ISM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	66385	1343	66327	656	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGCATATGATTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	57709867	57741309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ENSMUSG00000036503.14_57727953_57741503_1	chr3	+	747	3	ISM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	84470	1149	84412	850	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGACAAAATGTAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	57727952	57741503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_57728022_57740384_57740466_57740906
ENSMUSG00000036503.14_57728005_57741558_1	chr3	+	750	3	ISM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	84522	1094	84464	905	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTAGATCACAGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	57728004	57741558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_57728022_57740384_57740466_57740906
ENSMUSG00000036504.7_25463442_25464907_1	chr2	-	608	3	FSM	ENSMUSG00000036504.7	ENSMUST00000039156.7	937	3	329	0	329	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGACTTGTGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	25464907	25463441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_25463712_25464199_25464325_25464694
ENSMUSG00000036504.7_25464199_25465236_1	chr2	-	668	2	ISM	ENSMUSG00000036504.7	ENSMUST00000039156.7	937	3	0	757	0	-757	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCCAGTCCCCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	25465236	25464198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25464325_25464694
ENSMUSG00000036513.16_57552722_57557553_1	chr3	-	1667	2	ISM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	1583	952	1583	-952	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAGAGCTCTGTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	57557553	57552721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57554298_57557462
ENSMUSG00000036513.16_57552951_57558925_1	chr3	-	1687	4	ISM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	211	1181	211	-1181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTCACGGGGTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	57558925	57552950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_57554298_57557462_57557637_57558111_57558195_57558842
ENSMUSG00000036513.16_57553102_57559129_1	chr3	-	1653	5	FSM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	7	1332	7	-1332	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGAACTCAGGTCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	57559129	57553101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_57554298_57557462_57557637_57558111_57558195_57558842_57558921_57559007
ENSMUSG00000036528.17_107236493_107318485_1	chr7	+	993	10	ISM	ENSMUSG00000036528.17	ENST00000684123.1	3015	25	65	28570	65	-25187	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGCCCAGAGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	107236492	107318485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107236518_107252224_107252440_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414
ENSMUSG00000036528.17_107252352_107322164_1	chr7	+	1021	12	ISM	ENSMUSG00000036528.17	ENST00000684123.1	3015	25	15924	24891	-12141	-21508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGTGGGAGAGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	107252351	107322164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107252440_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143
ENSMUSG00000036528.17_107264518_107337594_1	chr7	+	2257	17	ISM	ENSMUSG00000036528.17	ENST00000684215.1	3515	22	25	6496	25	-6078	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAGAGCTGTAAATATT	NA	NA	NA	NA	NA	NA	NA	NA	107264517	107337594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107265136_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107327016_107328345_107328473_107329027_107329157_107337047_107337199_107337481
ENSMUSG00000036528.17_107264672_107338425_1	chr7	+	2223	19	ISM	ENSMUSG00000036528.17	ENST00000684215.1	3515	22	179	5665	179	-5247	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	851	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACATCATCTCAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	107264671	107338425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107265136_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107327016_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393
ENSMUSG00000036528.17_107264903_107342152_1	chr7	+	2249	21	ISM	ENSMUSG00000036528.17	ENST00000684215.1	3515	22	410	1938	410	-1520	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1044	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAACATCCCCCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	107264902	107342152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107265136_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107327016_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112
ENSMUSG00000036528.17_107264956_107342203_1	chr7	+	2247	21	ISM	ENSMUSG00000036528.17	ENST00000684215.1	3515	22	463	1887	463	-1469	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1041	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAACGCCCTGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	107264955	107342203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107265136_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107327016_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112
ENSMUSG00000036528.17_107265033_107342266_1	chr7	+	2233	21	ISM	ENSMUSG00000036528.17	ENST00000684215.1	3515	22	540	1824	540	-1406	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACACACCTCTGACCACC	NA	NA	NA	NA	NA	NA	NA	NA	107265032	107342266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107265136_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107327016_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112
ENSMUSG00000036528.17_107280968_107343502_1	chr7	+	2285	21	ISM	ENSMUSG00000036528.17	ENST00000684215.1	3515	22	16475	588	-3739	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGTCTACCGGGGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	107280967	107343502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107327016_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
ENSMUSG00000036528.17_107284840_107326887_1	chr7	+	945	12	ISM	ENSMUSG00000036528.17	ENST00000528883.5	2518	21	133	16785	133	-16785	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGGAAGCTTTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	107284839	107326887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107284887_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850
ENSMUSG00000036528.17_107285063_107326992_1	chr7	+	1007	11	ISM	ENSMUSG00000036528.17	ENST00000528883.5	2518	21	356	16680	356	-16680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTCGAGCCCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	107285062	107326992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850
ENSMUSG00000036528.17_107285165_107328399_1	chr7	+	959	12	ISM	ENSMUSG00000036528.17	ENST00000528883.5	2518	21	458	15273	458	-15273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAAGCCCTCAGTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	107285164	107328399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345
ENSMUSG00000036528.17_107296771_107328472_1	chr7	+	1019	11	ISM	ENSMUSG00000036528.17	ENST00000528883.5	2518	21	12064	15200	12064	-15200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTGGTGGGAATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	107296770	107328472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345
ENSMUSG00000036528.17_107296771_107343672_1	chr7	+	2250	19	ISM	ENSMUSG00000036528.17	ENST00000684215.1	3515	22	32278	418	12064	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTACAGAAAACAATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	107296770	107343672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107327016_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
ENSMUSG00000036528.17_107307985_107329156_1	chr7	+	1015	11	ISM	ENSMUSG00000036528.17	ENST00000528883.5	2518	21	23278	14516	23278	-14516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGACCTATTCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	107307984	107329156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027
ENSMUSG00000036528.17_107313799_107343943_1	chr7	+	2287	17	ISM	ENSMUSG00000036528.17	ENST00000684215.1	3515	22	49306	147	29092	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTGCCTTAGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	107313798	107343943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107327016_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
ENSMUSG00000036528.17_107313832_107343871_1	chr7	+	2182	17	ISM	ENSMUSG00000036528.17	ENST00000684215.1	3515	22	49339	219	29125	199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCAGGCCCTGGGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	107313831	107343871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107327016_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
ENSMUSG00000036528.17_107313837_107337112_1	chr7	+	941	11	ISM	ENSMUSG00000036528.17	ENST00000528883.5	2518	21	29130	6560	29130	-6560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGGTCAGTATGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	107313836	107337112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047
ENSMUSG00000036528.17_107313867_107344092_1	chr7	+	2368	17	ISM	ENSMUSG00000036528.17	ENST00000684215.1	3515	22	49374	-2	29160	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGTGAAACATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	107313866	107344092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107327016_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
ENSMUSG00000036528.17_107318414_107337896_1	chr7	+	1023	10	ISM	ENSMUSG00000036528.17	ENST00000528883.5	2518	21	33707	5776	33707	-5776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGATTTTTCCGTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	107318413	107337896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807
ENSMUSG00000036528.17_107320536_107338516_1	chr7	+	1043	10	ISM	ENSMUSG00000036528.17	ENST00000528883.5	2518	21	35829	5156	35829	-5156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGAGTGTACTAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	107320535	107338516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393
ENSMUSG00000036528.17_107322142_107339840_1	chr7	+	1043	9	ISM	ENSMUSG00000036528.17	ENST00000528883.5	2518	21	37435	3832	37435	-3832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGCTCTCTGGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	107322141	107339840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714
ENSMUSG00000036528.17_107326933_107342147_1	chr7	+	952	9	ISM	ENSMUSG00000036528.17	ENST00000528883.5	2518	21	42226	1525	42226	-1525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTCTTAACATCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	107326932	107342147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107326993_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112
ENSMUSG00000036528.17_107337124_107346824_1	chr7	+	1028	9	ISM	ENSMUSG00000036528.17	ENST00000684123.1	3015	25	100696	231	52417	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTCATGGCTGAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	107337123	107346824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383_107343561_107345577_107345644_107346753
ENSMUSG00000036528.17_107337480_107343672_1	chr7	+	930	6	ISM	ENSMUSG00000036528.17	ENST00000528883.5	2518	21	52773	0	52773	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTACAGAAAACAATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	107337479	107343672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
ENSMUSG00000036528.17_107337570_107346951_1	chr7	+	992	8	ISM	ENSMUSG00000036528.17	ENST00000684123.1	3015	25	101142	104	52863	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCAGAGGGGTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	107337569	107346951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383_107343561_107345577_107345644_107346753
ENSMUSG00000036528.17_107337808_107347093_1	chr7	+	1110	7	ISM	ENSMUSG00000036528.17	ENST00000684123.1	3015	25	101380	-38	53101	38	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGTAAATGCAGAACAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	107337807	107347093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383_107343561_107345577_107345644_107346753
ENSMUSG00000036529.18_89172439_89192362_1	chr15	-	5854	38	ISM	ENSMUSG00000036529.18	ENSMUST00000123791.8	6190	40	7152	0	7096	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTCCTTTGTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	89192362	89172438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224
ENSMUSG00000036552.20_15261470_15280098_1	chr17	+	2024	16	ISM	ENSMUSG00000036552.20	ENSMUST00000097393.11	2535	18	0	4014	0	-4014	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTAGTTGTGCTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	15261469	15280098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027
ENSMUSG00000036552.20_15261674_15280193_1	chr17	+	1915	16	ISM	ENSMUSG00000036552.20	ENSMUST00000097393.11	2535	18	204	3919	204	-3919	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGTAGGTTACGTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	15261673	15280193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027
ENSMUSG00000036552.20_15261730_15280246_1	chr17	+	1912	16	ISM	ENSMUSG00000036552.20	ENSMUST00000097393.11	2535	18	260	3866	-166	-3866	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCTGTCTCTCCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	15261729	15280246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027
ENSMUSG00000036552.20_15261877_15283916_1	chr17	+	1932	18	FSM	ENSMUSG00000036552.20	ENSMUST00000097393.11	2535	18	407	196	-19	-196	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACCACTCTTACACACG	NA	NA	NA	NA	NA	NA	NA	NA	15261876	15283916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283863
ENSMUSG00000036552.20_15262510_15271906_1	chr17	+	1067	9	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	0	5735	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTATCCCCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	15262509	15271906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271793
ENSMUSG00000036552.20_15263265_15284112_1	chr17	+	1929	16	ISM	ENSMUSG00000036552.20	ENSMUST00000097393.11	2535	18	1795	0	755	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTGTCCCATTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	15263264	15284112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283863
ENSMUSG00000036553.17_35854661_35863806_1	chr5	-	1656	7	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	12641	-1	12641	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGACAACCTGAGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	35863806	35854660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205
ENSMUSG00000036553.17_35854786_35863929_1	chr5	-	1654	7	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	12518	124	12518	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGATGTCCCTCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	35863929	35854785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205
ENSMUSG00000036553.17_35854841_35863981_1	chr5	-	1651	7	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	12466	179	12466	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTGAAGATCTACACCCG	NA	NA	NA	NA	NA	NA	NA	NA	35863981	35854840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205
ENSMUSG00000036553.17_35857119_35864119_1	chr5	-	1653	6	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	12328	2457	12328	-2457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACCCTGTACTATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	35864119	35857118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205
ENSMUSG00000036553.17_35857159_35864181_1	chr5	-	1675	6	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	12266	2497	12266	-2497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCTGTCACTCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	35864181	35857158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205
ENSMUSG00000036553.17_35857661_35864323_1	chr5	-	1664	5	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	12124	2999	12124	-2999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACCCCAGGAGGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	35864323	35857660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205
ENSMUSG00000036553.17_35857714_35864375_1	chr5	-	1663	5	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	12072	3052	12072	-3052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGGAACTGCGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	35864375	35857713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205
ENSMUSG00000036553.17_35858023_35864505_1	chr5	-	1661	4	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	11942	3361	11942	-3361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCCAAGCTGGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	35864505	35858022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35858052_35859194_35859346_35860694_35860876_35863205
ENSMUSG00000036553.17_35859274_35864618_1	chr5	-	1666	3	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	11829	4612	11829	-4612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCACGCGCCTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	35864618	35859273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35859346_35860694_35860876_35863205
ENSMUSG00000036553.17_35863287_35868250_1	chr5	-	1691	2	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	8197	8625	8197	-8625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCCGGGCCCTCCCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	35868250	35863286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35864917_35868189
ENSMUSG00000036553.17_35863445_35871460_1	chr5	-	1675	3	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	4987	8783	4987	-8783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGGCTAACTTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	35871460	35863444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35864917_35868189_35868339_35871406
ENSMUSG00000036553.17_35863586_35872388_1	chr5	-	1695	4	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	4059	8924	4059	-8924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAGGACCAGGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	35872388	35863585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35864917_35868189_35868339_35871406_35871603_35872369
ENSMUSG00000036553.17_35863759_35873595_1	chr5	-	1723	5	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	2852	9097	2852	-9097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGTACAGCCAGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	35873595	35863758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35864917_35868189_35868339_35871406_35871603_35872369_35872447_35873452
ENSMUSG00000036553.17_35863917_35874324_1	chr5	-	1684	6	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	2123	9255	2123	-9255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCCTGGGCCAAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	35874324	35863916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35864917_35868189_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273
ENSMUSG00000036553.17_35864043_35875637_1	chr5	-	1677	7	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	810	9381	810	-9381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTGACATTTATGGC	NA	NA	NA	NA	NA	NA	NA	NA	35875637	35864042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35864917_35868189_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614
ENSMUSG00000036553.17_35864159_35876343_1	chr5	-	1671	8	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	104	9497	104	-9497	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTACACCCACCTCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	35876343	35864158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35864917_35868189_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316
ENSMUSG00000036553.17_35864216_35876389_1	chr5	-	1660	8	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	58	9554	58	-9554	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATCTGTGGCCTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	35876389	35864215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35864917_35868189_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316
ENSMUSG00000036553.17_35864268_35876439_1	chr5	-	1658	8	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	8	9606	8	-9606	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGCCACTCCTGCAACGCA	NA	NA	NA	NA	NA	NA	NA	NA	35876439	35864267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_35864917_35868189_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316
ENSMUSG00000036555.15_140668157_140679205_1	chr5	-	799	9	NNC	ENSMUSG00000036555.15	novel	881	9	NA	NA	80	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCAGGTCTAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	140679205	140668156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675681_140675825_140677354_140677426_140678548_140678684_140679169
ENSMUSG00000036555.15_140668157_140679205_2	chr5	-	801	9	FSM	ENSMUSG00000036555.15	ENST00000438376.6	881	9	80	0	80	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCAGGTCTAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	140679205	140668156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675679_140675825_140677354_140677426_140678548_140678684_140679169
ENSMUSG00000036555.15_140669194_140685455_1	chr5	-	837	10	ISM	ENSMUSG00000036555.15	ENST00000402050.7	989	11	33	1037	33	-1037	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCTGAAGGAGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	140685455	140669193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675679_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439
ENSMUSG00000036555.15_140669209_140685457_1	chr5	-	823	10	NNC	ENSMUSG00000036555.15	novel	989	11	NA	NA	31	-1052	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCGAGGAGAACCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	140685457	140669208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675679_140675825_140677355_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439
ENSMUSG00000036561.10_89137361_89144490_1	chr15	+	1456	3	ISM	ENSMUSG00000036561.10	ENSMUST00000226221.2	2559	7	41590	385	123	-385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACGGCTGCCTATGGATG	NA	NA	NA	NA	NA	NA	NA	NA	89137360	89144490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_89137454_89140911_89141053_89143268
ENSMUSG00000036564.18_96429698_96441584_1	chr8	+	2725	13	NNC	ENSMUSG00000036564.18	novel	2738	14	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTCGTGTTTCCTATC	NA	NA	NA	NA	NA	NA	NA	NA	96429697	96441584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_96429806_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437690_96437773_96439805
ENSMUSG00000036580.16_55019587_55043391_1	chr3	+	2634	9	FSM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	0	1347	0	-1341	multi-exon	TRUE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTATGTGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	55019586	55043391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_55019913_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUSG00000036580.16_55019587_55044314_1	chr3	+	3112	8	FSM	ENSMUSG00000036580.16	ENSMUST00000107971.9	3567	8	37	418	0	-418	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTAAGAAATCACTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55019586	55044314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUSG00000036580.16_55019808_55043470_1	chr3	+	2492	9	FSM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	221	1268	0	-1262	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGGAAAGGACTTAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	55019807	55043470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_55019913_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUSG00000036580.16_55019808_55043542_1	chr3	+	2564	9	FSM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	221	1196	0	-1190	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTCAGCAGATAAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	55019807	55043542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_55019913_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUSG00000036580.16_55024430_55044420_1	chr3	+	3141	7	ISM	ENSMUSG00000036580.16	ENSMUST00000107971.9	3567	8	4880	312	4622	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATTACAATTTATACTGA	NA	NA	NA	NA	NA	NA	NA	NA	55024429	55044420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_55025217_55029020_55029219_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUSG00000036580.16_55024499_55044461_1	chr3	+	3113	7	ISM	ENSMUSG00000036580.16	ENSMUST00000107971.9	3567	8	4949	271	4691	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTCCATACCACAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	55024498	55044461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_55025217_55029020_55029219_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUSG00000036580.16_55024694_55043924_1	chr3	+	2552	8	ISM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	5107	814	4886	-808	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGCTGCCCGTATGCT	NA	NA	NA	NA	NA	NA	NA	NA	55024693	55043924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUSG00000036580.16_55024764_55044732_1	chr3	+	3119	7	ISM	ENSMUSG00000036580.16	ENSMUST00000107971.9	3567	8	5214	0	4956	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTGGGCCTCAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	55024763	55044732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_55025217_55029020_55029219_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUSG00000036580.16_55024777_55043980_1	chr3	+	2525	8	ISM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	5190	758	4969	-752	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGGGACCATGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	55024776	55043980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUSG00000036580.16_55024889_55044119_1	chr3	+	2552	8	ISM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	5302	619	5081	-613	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGGCCTCAGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	55024888	55044119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUSG00000036580.16_55029062_55044464_1	chr3	+	2528	7	ISM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	9475	274	9254	-268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCATACCACAGGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	55029061	55044464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUSG00000036580.16_55032238_55044732_1	chr3	+	2577	6	ISM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	12651	6	12430	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTGGGCCTCAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	55032237	55044732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUSG00000036585.17_38975137_38991672_1	chr18	-	211	3	FSM	ENSMUSG00000036585.17	ENST00000407758.5	494	3	106	177	106	-177	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAAACCATTATAACA	NA	NA	NA	NA	NA	NA	NA	NA	38991672	38975136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_38975175_38980099_38980199_38991598
ENSMUSG00000036591.17_20855055_20872649_1	chr2	-	1915	16	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	15459	34	15459	-34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAAGGAGAATACGGAA	NA	NA	NA	NA	NA	NA	NA	NA	20872649	20855054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_20855197_20857848_20857881_20858768_20859044_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612
ENSMUSG00000036591.17_20855191_20876512_1	chr2	-	1974	18	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	11596	170	11596	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGATCCGGGAAGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	20876512	20855190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_20855197_20857848_20857881_20858768_20859044_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420
ENSMUSG00000036591.17_20858884_20884834_1	chr2	-	1951	17	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	3274	3863	3274	-3863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGTACACGTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	20884834	20858883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_20859044_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771
ENSMUSG00000036591.17_20858941_20884879_1	chr2	-	1939	17	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	3229	3920	3229	-3920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGCTGCCTTGTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	20884879	20858940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_20859044_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771
ENSMUSG00000036591.17_20858994_20884937_1	chr2	-	1944	17	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	3171	3973	3171	-3973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCCTGATGGACAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	20884937	20858993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_20859044_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771
ENSMUSG00000036591.17_20859816_20885103_1	chr2	-	1990	16	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	3005	4795	3005	-4795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGTACCAAACATAGATCA	NA	NA	NA	NA	NA	NA	NA	NA	20885103	20859815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771
ENSMUSG00000036591.17_20860466_20885215_1	chr2	-	1950	14	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	2893	5445	2893	-5445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGACAACATGACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	20885215	20860465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771
ENSMUSG00000036591.17_20864588_20885507_1	chr2	-	1967	11	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	2601	9567	2601	-9567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAGCAGTTTACTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	20885507	20864587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771
ENSMUSG00000036591.17_20865147_20885728_1	chr2	-	1980	9	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	2380	10126	2380	-10126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGACTGCCCACCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	20885728	20865146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771
ENSMUSG00000036591.17_20865213_20885772_1	chr2	-	1958	9	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	2336	10192	2336	-10192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAGCATCGTGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	20885772	20865212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771
ENSMUSG00000036591.17_20867989_20886109_1	chr2	-	1950	6	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	1999	12968	1999	-12968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTCTGACTGTGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	20886109	20867988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771
ENSMUSG00000036591.17_20870112_20886326_1	chr2	-	1944	5	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	1782	15091	1782	-15091	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGTTCCGACCACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	20886326	20870111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771
ENSMUSG00000036591.17_20870169_20886379_1	chr2	-	1940	5	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	1729	15148	1729	-15148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCGAGAAAGGGTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	20886379	20870168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771
ENSMUSG00000036591.17_20876203_20886540_1	chr2	-	2031	3	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	1568	21182	1568	-21182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCTCAGATTACTACT	NA	NA	NA	NA	NA	NA	NA	NA	20886540	20876202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_20876306_20876420_20876580_20884771
ENSMUSG00000036591.17_20876421_20886663_1	chr2	-	2051	2	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	1445	21400	1445	-21400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGTGTAAAGTGGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	20886663	20876420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_20876580_20884771
ENSMUSG00000036591.17_20876540_20888040_1	chr2	-	1961	3	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	68	21519	68	-21519	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTGCATCTGCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	20888040	20876539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_20876580_20884771_20886663_20888010
ENSMUSG00000036596.7_35659677_35682915_1	chr5	-	1970	10	FSM	ENSMUSG00000036596.7	ENST00000315782.6	1993	10	24	-1	24	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTCAGGCCCGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	35682915	35659676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_35660026_35660995_35661096_35664015_35664156_35665461_35665598_35668366_35668526_35669046_35669209_35669754_35669952_35672694_35672908_35674736_35675112_35682776
ENSMUSG00000036599.11_140491330_140510593_1	chr5	+	1420	2	FSM	ENSMUSG00000036599.11	ENSMUST00000043050.9	2331	2	25	886	25	-886	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGCTACCCCAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	140491329	140510593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_140491452_140509295
ENSMUSG00000036606.18_89039872_89042173_1	chr15	-	1312	7	ISM	ENSMUSG00000036606.18	ENSMUST00000060808.10	6394	36	12718	120	12718	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTCCTGGAGGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	89042173	89039871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103
ENSMUSG00000036606.18_89048451_89051234_1	chr15	-	974	8	ISM	ENSMUSG00000036606.18	ENSMUST00000060808.10	6394	36	3657	8699	3657	-8699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACCCAGAGGAGGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	89051234	89048450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143
ENSMUSG00000036606.18_89051304_89054891_1	chr15	-	1047	2	ISM	ENSMUSG00000036606.18	ENSMUST00000060808.10	6394	36	0	11552	0	-11552	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGACCTGGCGCGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	89054891	89051303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89052231_89054771
ENSMUSG00000036613.9_28801838_28918366_1	chr12	+	2557	9	FSM	ENSMUSG00000036613.9	ENSMUST00000221877.2	4091	9	36	1498	0	1276	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGCATACTTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	28801837	28918366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_28802004_28810068_28810153_28816770_28816904_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
ENSMUSG00000036613.9_28801860_28918429_1	chr12	+	2598	9	FSM	ENSMUSG00000036613.9	ENSMUST00000221877.2	4091	9	58	1435	22	1339	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGTCAGAAGTCAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	28801859	28918429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_28802004_28810068_28810153_28816770_28816904_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
ENSMUSG00000036613.9_28801860_28918494_1	chr12	+	2663	9	FSM	ENSMUSG00000036613.9	ENSMUST00000221877.2	4091	9	58	1370	22	-1370	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAAGAGCCCTGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	28801859	28918494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_28802004_28810068_28810153_28816770_28816904_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
ENSMUSG00000036613.9_28816772_28912981_1	chr12	+	611	5	ISM	ENSMUSG00000036613.9	ENST00000398659.8	1175	8	6706	4109	6706	-4109	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGCTGGTGCGTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	28816771	28912981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_28816961_28878706_28878864_28897555_28897656_28909250_28909388_28912953
ENSMUSG00000036613.9_28816818_28918780_1	chr12	+	2674	7	ISM	ENSMUSG00000036613.9	ENSMUST00000221877.2	4091	9	15016	1084	6752	-1084	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCAGGGGTTCATGTC	NA	NA	NA	NA	NA	NA	NA	NA	28816817	28918780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_28816904_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
ENSMUSG00000036613.9_28816901_28913112_1	chr12	+	613	5	ISM	ENSMUSG00000036613.9	ENST00000398659.8	1175	8	6835	3978	6835	-3978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCACTGGTACAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	28816900	28913112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_28816961_28878706_28878864_28897555_28897656_28909250_28909388_28912953
ENSMUSG00000036613.9_28878709_28914734_1	chr12	+	626	5	ISM	ENSMUSG00000036613.9	ENST00000398659.8	1175	8	68643	2356	68643	-2356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATCCTGTCCAACATGG	NA	NA	NA	NA	NA	NA	NA	NA	28878708	28914734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668
ENSMUSG00000036613.9_28878833_28918908_1	chr12	+	2590	6	ISM	ENSMUSG00000036613.9	ENST00000398659.8	1175	8	68767	-1818	68767	-956	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTGCAGAATAGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	28878832	28918908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
ENSMUSG00000036613.9_28914690_28919349_1	chr12	+	2574	2	ISM	ENSMUSG00000036613.9	ENST00000398659.8	1175	8	104624	-2259	104624	-515	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGTAGAAACAGATTTCG	NA	NA	NA	NA	NA	NA	NA	NA	28914689	28919349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_28914834_28916919
ENSMUSG00000036613.9_28914734_28919408_1	chr12	+	2589	2	ISM	ENSMUSG00000036613.9	ENST00000398659.8	1175	8	104668	-2318	104668	-456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGAAGTAGGAGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	28914733	28919408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_28914834_28916919
ENSMUSG00000036613.9_28914776_28919471_1	chr12	+	2610	2	ISM	ENSMUSG00000036613.9	ENST00000398659.8	1175	8	104710	-2381	104710	-393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTCAAAGAAACAAACAAATA	NA	NA	NA	NA	NA	NA	NA	NA	28914775	28919471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_28914834_28916919
ENSMUSG00000036617.18_20524602_20666729_1	chr2	+	442	3	ISM	ENSMUSG00000036617.18	ENSMUST00000114604.9	4786	18	0	147967	0	-82898	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGTCCTCAACCTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	20524601	20666729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_20524739_20534769_20535054_20666708
ENSMUSG00000036617.18_20802750_20810438_1	chr2	+	424	4	ISM	ENSMUSG00000036617.18	ENSMUST00000114608.3	6635	16	60625	5086	60625	-2563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGAAAATGGCCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	20802749	20810438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_20802843_20803426_20803595_20806352_20806473_20810395
ENSMUSG00000036620.15_50116162_50122964_1	chr11	+	1027	6	ISM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	0	2966	0	-2966	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTAATACTCTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	50116161	50122964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850
ENSMUSG00000036620.15_50116326_50123410_1	chr11	+	959	8	ISM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	164	2520	164	-2520	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCCAACTACTTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	50116325	50123410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390
ENSMUSG00000036620.15_50116387_50123453_1	chr11	+	941	8	ISM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	225	2477	225	-2477	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCTCCGAGGACTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	50116386	50123453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390
ENSMUSG00000036620.15_50116496_50123833_1	chr11	+	946	9	ISM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	334	2097	334	-2097	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGCCCATAGACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	50116495	50123833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771
ENSMUSG00000036620.15_50121575_50124364_1	chr11	+	1058	10	ISM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	5413	1566	5413	-1566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTACCAGCATTTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	50121574	50124364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290
ENSMUSG00000036620.15_50122097_50125094_1	chr11	+	943	10	ISM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	5935	836	5935	-836	internal_fragment	TRUE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGGAAGGCCGCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	50122096	50125094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070
ENSMUSG00000036620.15_50122851_50125349_1	chr11	+	1018	9	ISM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	6689	581	6689	-581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATCAGCTGGGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	50122850	50125349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236
ENSMUSG00000036620.15_50123072_50125502_1	chr11	+	1036	9	ISM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	6910	428	6910	-428	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGTGTCGCTGCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	50123071	50125502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ENSMUSG00000036620.15_50123771_50125744_1	chr11	+	1026	7	ISM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	7609	186	7609	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTGGTCTTGAGCCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	50123770	50125744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ENSMUSG00000036620.15_50124334_50125930_1	chr11	+	929	5	ISM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	8172	0	8172	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCTCATAGGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	50124333	50125930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ENSMUSG00000036632.10_54642960_54657216_1	chr3	+	1463	10	NNC	ENSMUSG00000036632.10	novel	1471	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3878	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTGTCCTCTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	54642959	54657216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656657
ENSMUSG00000036632.10_54646204_54656775_1	chr3	+	804	8	FSM	ENSMUSG00000036632.10	ENST00000679837.1	785	8	0	-19	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGACTGCATTTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	54646203	54656775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652527_54652588_54653886_54654039_54656028_54656115_54656649
ENSMUSG00000036632.10_54646204_54656775_2	chr3	+	828	8	FSM	ENSMUSG00000036632.10	ENST00000443765.6	828	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGACTGCATTTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	54646203	54656775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_54646375_54646682_54646730_54649588_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
ENSMUSG00000036634.16_30598608_30607884_1	chr7	-	1402	7	ISM	ENSMUSG00000036634.16	ENST00000361922.8	2332	11	4408	-10	4408	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCAGTCTAGACCCAT	NA	NA	NA	NA	NA	NA	NA	NA	30607884	30598607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30599124_30599776_30599822_30600062_30600163_30600487_30600585_30601073_30601362_30606330_30606592_30607789
ENSMUSG00000036634.16_30598608_30608493_1	chr7	-	1613	7	ISM	ENSMUSG00000036634.16	ENST00000392213.8	2300	10	3799	3	3799	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCAGTCTAGACCCAT	NA	NA	NA	NA	NA	NA	NA	NA	30608493	30598607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30599124_30600062_30600163_30600487_30600585_30601073_30601362_30606330_30606592_30607789_30608048_30608400
ENSMUSG00000036634.16_30598956_30610909_1	chr7	-	1553	8	ISM	ENSMUSG00000036634.16	ENST00000537831.2	2278	9	1383	338	1383	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGCTGGGGGCTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	30610909	30598955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30599124_30600062_30600163_30600487_30600585_30601073_30601362_30606330_30606592_30607789_30608048_30608400_30608698_30610825
ENSMUSG00000036634.16_30599011_30608586_1	chr7	-	1348	8	ISM	ENSMUSG00000036634.16	ENST00000361922.8	2332	11	3706	393	3706	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTACACCCTGACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	30608586	30599010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30599124_30599776_30599822_30600062_30600163_30600487_30600585_30601073_30601362_30606330_30606592_30607789_30608048_30608400
ENSMUSG00000036634.16_30599777_30608697_1	chr7	-	1346	7	ISM	ENSMUSG00000036634.16	ENST00000361922.8	2332	11	3595	1159	3595	-821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTCCCGGGGGCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	30608697	30599776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30599822_30600062_30600163_30600487_30600585_30601073_30601362_30606330_30606592_30607789_30608048_30608400
ENSMUSG00000036634.16_30600063_30611119_1	chr7	-	1595	7	ISM	ENSMUSG00000036634.16	ENST00000361922.8	2332	11	1173	1445	1173	-1107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGGGCCACACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	30611119	30600062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30600163_30600487_30600585_30601073_30601362_30606330_30606592_30607789_30608048_30608400_30608698_30610825
ENSMUSG00000036634.16_30601285_30612285_1	chr7	-	1366	7	ISM	ENSMUSG00000036634.16	ENST00000361922.8	2332	11	7	2667	7	-2329	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCGGAACCCTCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	30612285	30601284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30601362_30606330_30606592_30607789_30608048_30608400_30608698_30610825_30611195_30611315_30611383_30612248
ENSMUSG00000036634.16_30608608_30612266_1	chr7	-	305	4	FSM	ENSMUSG00000036634.16	ENST00000597035.5	482	4	26	151	26	-151	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGAGCTGAGCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	30612266	30608607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30608698_30611064_30611195_30611315_30611383_30612248
ENSMUSG00000036636.11_25352439_25368258_1	chr17	+	749	8	ISM	ENSMUSG00000036636.11	ENST00000262318.12	2445	24	-7	11344	-7	-11344	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTCAAGGTGAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	25352438	25368258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25352589_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184
ENSMUSG00000036636.11_25352550_25369221_1	chr17	+	709	9	ISM	ENSMUSG00000036636.11	ENST00000262318.12	2445	24	104	10381	104	-10381	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTATCTGCTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	25352549	25369221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25352589_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160
ENSMUSG00000036636.11_25364540_25369580_1	chr17	+	771	9	ISM	ENSMUSG00000036636.11	ENSMUST00000160961.8	3983	25	8944	11492	8944	-10022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGTTGAGGAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	25364539	25369580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515
ENSMUSG00000036636.11_25365290_25370206_1	chr17	+	748	8	ISM	ENSMUSG00000036636.11	ENSMUST00000160961.8	3983	25	9694	10866	9694	-9396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTTGCTAGCCATATAG	NA	NA	NA	NA	NA	NA	NA	NA	25365289	25370206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089
ENSMUSG00000036636.11_25365795_25372014_1	chr17	+	700	10	NNC	ENSMUSG00000036636.11	novel	2445	24	NA	NA	10199	-7588	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTGAGGCCATGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	25365794	25372014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370729_25371321_25371383_25371989
ENSMUSG00000036636.11_25366682_25372128_1	chr17	+	757	9	NNC	ENSMUSG00000036636.11	novel	2445	24	NA	NA	11086	-7474	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCACAGGCTTTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	25366681	25372128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370729_25371321_25371383_25371989
ENSMUSG00000036636.11_25368007_25372799_1	chr17	+	774	9	NNC	ENSMUSG00000036636.11	novel	2445	24	NA	NA	12411	-6803	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGCAGTCAGCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	25368006	25372799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370729_25371321_25371383_25371989_25372129_25372705
ENSMUSG00000036636.11_25368224_25374381_1	chr17	+	706	9	NNC	ENSMUSG00000036636.11	novel	2445	24	NA	NA	12628	-5221	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTTCTTCCTGGCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	25368223	25374381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370729_25371321_25371383_25371989_25372129_25372705_25372800_25374341
ENSMUSG00000036636.11_25369155_25374511_1	chr17	+	797	8	NNC	ENSMUSG00000036636.11	novel	2445	24	NA	NA	13559	-5091	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGGGGGATAGCACG	NA	NA	NA	NA	NA	NA	NA	NA	25369154	25374511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_25369255_25369515_25369581_25370089_25370207_25370677_25370729_25371321_25371383_25371989_25372129_25372705_25372800_25374341
ENSMUSG00000036636.11_25369515_25375826_1	chr17	+	750	8	NNC	ENSMUSG00000036636.11	novel	2445	24	NA	NA	13919	-3776	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCCCAGCTCTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	25369514	25375826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_25369581_25370089_25370207_25370677_25370729_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774
ENSMUSG00000036636.11_25370146_25376172_1	chr17	+	687	8	NNC	ENSMUSG00000036636.11	novel	2445	24	NA	NA	14550	-3430	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCTACGGTTTCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	25370145	25376172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_25370207_25370677_25370729_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113
ENSMUSG00000036636.11_25371321_25376489_1	chr17	+	672	7	ISM	ENSMUSG00000036636.11	ENSMUST00000160961.8	3983	25	15725	4583	15725	-3113	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTACCCTTCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	25371320	25376489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462
ENSMUSG00000036636.11_25372088_25378462_1	chr17	+	722	8	ISM	ENSMUSG00000036636.11	ENSMUST00000160961.8	3983	25	16492	2610	16492	-1140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGCGTTCCCAGCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	25372087	25378462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441
ENSMUSG00000036636.11_25372770_25378716_1	chr17	+	789	8	ISM	ENSMUSG00000036636.11	ENSMUST00000160961.8	3983	25	17174	2356	17174	-886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTCTGAATTCATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	25372769	25378716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583
ENSMUSG00000036636.11_25374459_25379150_1	chr17	+	733	8	ISM	ENSMUSG00000036636.11	ENSMUST00000160961.8	3983	25	18863	1922	18863	-452	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCACCTGGTAGTAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	25374458	25379150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103
ENSMUSG00000036636.11_25376150_25379516_1	chr17	+	724	7	ISM	ENSMUSG00000036636.11	ENSMUST00000160961.8	3983	25	20554	1556	20554	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTTGGACAGCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	25376149	25379516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ENSMUSG00000036639.13_140317615_140323696_1	chr5	+	807	5	FSM	ENSMUSG00000036639.13	ENSMUST00000050205.12	954	5	-49	196	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTTGTGGCACCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	140317614	140323696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_140317711_140318177_140318229_140320209_140320375_140321067_140321214_140323347
ENSMUSG00000036644.16_50026651_50035925_1	chr11	+	184	2	ISM	ENSMUSG00000036644.16	ENST00000630103.1	300	3	4385	-1	4385	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCTAAAGATGCGGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	50026650	50035925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50026763_50035853
ENSMUSG00000036644.16_50026686_50043578_1	chr11	+	1546	9	ISM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	4463	19279	4420	7654	internal_fragment	TRUE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCCAGAATGAGCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	50026685	50043578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450
ENSMUSG00000036644.16_50036961_50047830_1	chr11	+	1554	8	ISM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	14738	15027	14695	11906	internal_fragment	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGAGGCCATGACCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	50036960	50047830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571
ENSMUSG00000036644.16_50047650_50062015_1	chr11	+	1541	10	ISM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	25427	842	25384	-842	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCAGCCCCACCGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	50047649	50062015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ENSMUSG00000036644.16_50049503_50062370_1	chr11	+	1544	8	ISM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	27280	487	27237	-487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCCTAGGCCAGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	50049502	50062370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ENSMUSG00000036646.14_25223461_25240613_1	chr2	+	1882	12	ISM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	720	1611	720	-1611	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGGGCCTGTTGGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	25223460	25240613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ENSMUSG00000036646.14_25231650_25241032_1	chr2	+	1904	9	ISM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	8909	1192	8909	-1192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGACCTTGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	25231649	25241032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ENSMUSG00000036646.14_25235521_25241518_1	chr2	+	1873	6	ISM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	12780	706	12780	-706	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGATTCTCCTATCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	25235520	25241518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ENSMUSG00000036646.14_25235576_25241567_1	chr2	+	1867	6	ISM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	12835	657	12835	-657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAATAGAAAGGACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	25235575	25241567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ENSMUSG00000036646.14_25238154_25241726_1	chr2	+	1889	5	ISM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	15413	498	15413	-498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCCAAGCCAGTTCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	25238153	25241726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ENSMUSG00000036646.14_25239224_25241962_1	chr2	+	1877	3	ISM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	16483	262	16483	-262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTCTCCATCTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	25239223	25241962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25239380_25239462_25239595_25240373
ENSMUSG00000036646.14_25239319_25242065_1	chr2	+	1885	3	ISM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	16578	159	16578	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCACAAAGCTGGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	25239318	25242065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25239380_25239462_25239595_25240373
ENSMUSG00000036661.15_73395391_73428218_1	chr15	+	1925	12	ISM	ENSMUSG00000036661.15	ENST00000424248.2	3234	20	57	14575	57	-14575	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTCCTCCTGAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	73395390	73428218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_73395404_73395987_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73414568_73414666_73416206_73416311_73416794_73416995_73418969_73419492_73426905_73427166_73428196
ENSMUSG00000036661.15_73395983_73428281_1	chr15	+	1980	11	ISM	ENSMUSG00000036661.15	ENST00000424248.2	3234	20	649	14512	649	-14512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAACCTCAAGTCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	73395982	73428281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73414568_73414666_73416206_73416311_73416794_73416995_73418969_73419492_73426905_73427166_73428196
ENSMUSG00000036661.15_73399808_73429561_1	chr15	+	2015	11	ISM	ENSMUSG00000036661.15	ENST00000424248.2	3234	20	4474	13232	4474	-13232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	811	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTCTGTTGCTGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	73399807	73429561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73414568_73414666_73416206_73416311_73416794_73416995_73418969_73419492_73426905_73427166_73428196_73428368_73429430
ENSMUSG00000036661.15_73404667_73434282_1	chr15	+	2055	11	ISM	ENSMUSG00000036661.15	ENST00000424248.2	3234	20	9333	8511	9333	-8511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	941	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGTTGGGATGAACT	NA	NA	NA	NA	NA	NA	NA	NA	73404666	73434282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_73404788_73405109_73405329_73409138_73409261_73414568_73414666_73416206_73416311_73416794_73416995_73418969_73419492_73426905_73427166_73428196_73428368_73429430_73429561_73434173
ENSMUSG00000036661.15_73405202_73436443_1	chr15	+	1938	11	NNC	ENSMUSG00000036661.15	novel	3234	20	NA	NA	9868	-6350	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	586	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTCCACCAGCATTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	73405201	73436443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_73405329_73409138_73409261_73414568_73414666_73416206_73416311_73416794_73416995_73418969_73419492_73426905_73427166_73428196_73428368_73429430_73429561_73434174_73434282_73436345
ENSMUSG00000036661.15_73405287_73436892_1	chr15	+	1924	12	ISM	ENSMUSG00000036661.15	ENST00000424248.2	3234	20	9953	5901	9953	-5901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTGGGTGGGCTCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	73405286	73436892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_73405329_73409138_73409261_73414568_73414666_73416206_73416311_73416794_73416995_73418969_73419492_73426905_73427166_73428196_73428368_73429430_73429561_73434173_73434282_73436345_73436486_73436864
ENSMUSG00000036661.15_73409137_73437022_1	chr15	+	2014	11	ISM	ENSMUSG00000036661.15	ENST00000424248.2	3234	20	13803	5771	13803	-5771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCAGGGCCCTATGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	73409136	73437022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_73409261_73414568_73414666_73416206_73416311_73416794_73416995_73418969_73419492_73426905_73427166_73428196_73428368_73429430_73429561_73434173_73434282_73436345_73436486_73436864
ENSMUSG00000036661.15_73409215_73438926_1	chr15	+	1981	12	ISM	ENSMUSG00000036661.15	ENST00000424248.2	3234	20	13881	3867	13881	-3867	internal_fragment	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGCACACTGCGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	73409214	73438926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_73409261_73414568_73414666_73416206_73416311_73416794_73416995_73418969_73419492_73426905_73427166_73428196_73428368_73429430_73429561_73434173_73434282_73436345_73436486_73436864_73437023_73438881
ENSMUSG00000036661.15_73416203_73440374_1	chr15	+	2035	11	ISM	ENSMUSG00000036661.15	ENST00000424248.2	3234	20	20869	2419	20869	-2419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTCCAGGCCTGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	73416202	73440374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_73416311_73416794_73416995_73418969_73419492_73426905_73427166_73428196_73428368_73429430_73429561_73434173_73434282_73436345_73436486_73436864_73437023_73438881_73439016_73440270
ENSMUSG00000036661.15_73416793_73440594_1	chr15	+	2067	11	ISM	ENSMUSG00000036661.15	ENST00000424248.2	3234	20	21459	2199	21459	-2199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGTGAAAGTGTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	73416792	73440594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_73416995_73418969_73419492_73426905_73427166_73428196_73428368_73429430_73429561_73434173_73434282_73436345_73436486_73436864_73437023_73438881_73439016_73440270_73440375_73440456
ENSMUSG00000036661.15_73416948_73442625_1	chr15	+	1935	12	ISM	ENSMUSG00000036661.15	ENST00000424248.2	3234	20	21614	168	21614	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	920	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTCAGGGAAAAACCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	73416947	73442625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_73416995_73418969_73419492_73426905_73427166_73428196_73428368_73429430_73429561_73434173_73434282_73436345_73436486_73436864_73437023_73438881_73439016_73440270_73440375_73440456_73440595_73442602
ENSMUSG00000036661.15_73419103_73442785_1	chr15	+	1915	11	ISM	ENSMUSG00000036661.15	ENST00000424248.2	3234	20	23769	8	23769	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGGAAGGTGGAGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	73419102	73442785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_73419492_73426905_73427166_73428196_73428368_73429430_73429561_73434173_73434282_73436345_73436486_73436864_73437023_73438881_73439016_73440270_73440375_73440456_73440595_73442602
ENSMUSG00000036667.15_42646876_42655498_1	chr6	-	1697	7	ISM	ENSMUSG00000036667.15	ENSMUST00000121083.8	3342	9	14523	0	856	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGCTCCAAAGGATATT	NA	NA	NA	NA	NA	NA	NA	NA	42655498	42646875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42647258_42650286_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359
ENSMUSG00000036667.15_42647009_42655603_1	chr6	-	1669	7	ISM	ENSMUSG00000036667.15	ENSMUST00000121083.8	3342	9	14418	133	751	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCCAGTCTACTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	42655603	42647008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42647258_42650286_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359
ENSMUSG00000036667.15_42647108_42655714_1	chr6	-	1681	7	ISM	ENSMUSG00000036667.15	ENSMUST00000121083.8	3342	9	14307	232	640	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTTCAGACAGAATATAC	NA	NA	NA	NA	NA	NA	NA	NA	42655714	42647107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42647258_42650286_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359
ENSMUSG00000036667.15_42650309_42656218_3	chr6	-	2106	7	FSM	ENSMUSG00000036667.15	ENST00000414990.3	2242	7	136	0	136	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGCCCATCGAGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	42656218	42650308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_42650573_42651446_42651540_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359
ENSMUSG00000036667.15_42650309_42656218_4	chr6	-	2105	7	NNC	ENSMUSG00000036667.15	novel	2242	7	NA	NA	136	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGCCCATCGAGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	42656218	42650308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_42650573_42651446_42651540_42651975_42652314_42653724_42653960_42654259_42654478_42655003_42655102_42655359
ENSMUSG00000036667.15_42650319_42655883_1	chr6	-	1668	6	ISM	ENSMUSG00000036667.15	ENSMUST00000045140.5	5256	8	14110	2356	471	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGTAAGGAGTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	42655883	42650318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359
ENSMUSG00000036667.15_42650379_42655940_1	chr6	-	1665	6	ISM	ENSMUSG00000036667.15	ENSMUST00000045140.5	5256	8	14053	2416	414	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGCTTAGCCTATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	42655940	42650378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359
ENSMUSG00000036667.15_42650472_42656053_1	chr6	-	1685	6	ISM	ENSMUSG00000036667.15	ENSMUST00000045140.5	5256	8	13940	2509	301	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTATGGGTCAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	42656053	42650471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359
ENSMUSG00000036667.15_42652252_42663322_1	chr6	-	1673	6	ISM	ENSMUSG00000036667.15	ENSMUST00000045140.5	5256	8	6671	4289	6671	-1943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGCTCATCCGGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	42663322	42652251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359_42656355_42663258
ENSMUSG00000036667.15_42655420_42669993_1	chr6	-	1696	3	ISM	ENSMUSG00000036667.15	ENSMUST00000045140.5	5256	8	0	7457	0	-5111	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTACCTGCGCCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	42669993	42655419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_42656355_42663258_42663893_42669866
ENSMUSG00000036672.6_106571309_106576483_1	chr8	-	1558	12	ISM	ENSMUSG00000036672.6	ENSMUST00000040776.6	1814	13	2203	0	2203	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAAGTTAGCGATATT	NA	NA	NA	NA	NA	NA	NA	NA	106576483	106571308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464
ENSMUSG00000036672.6_106571502_106578601_1	chr8	-	1536	13	FSM	ENSMUSG00000036672.6	ENSMUST00000040776.6	1814	13	85	193	85	-193	multi-exon	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCTTCCCTGGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	106578601	106571501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
ENSMUSG00000036672.6_106571556_106578601_1	chr8	-	1482	13	FSM	ENSMUSG00000036672.6	ENSMUST00000040776.6	1814	13	85	247	85	-247	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTTATCCCTTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	106578601	106571555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
ENSMUSG00000036672.6_106571614_106578620_1	chr8	-	1443	13	FSM	ENSMUSG00000036672.6	ENSMUST00000040776.6	1814	13	66	305	66	-305	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATCAAGTCTCGCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	106578620	106571613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
ENSMUSG00000036678.9_102246691_102252667_1	chr15	-	1121	10	ISM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	6527	4	6527	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCAGGATGTAACTCCG	NA	NA	NA	NA	NA	NA	NA	NA	102252667	102246690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523
ENSMUSG00000036678.9_102246897_102255133_1	chr15	-	1082	13	ISM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	4061	210	4061	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGCTCAGTTTCCACGCT	NA	NA	NA	NA	NA	NA	NA	NA	102255133	102246896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112
ENSMUSG00000036678.9_102247123_102255204_1	chr15	-	1062	12	ISM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	3990	436	3990	-436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCACTTTCCATCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	102255204	102247122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112
ENSMUSG00000036678.9_102247293_102258515_1	chr15	-	1167	13	ISM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	679	606	679	-606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCGAACTCGAAACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	102258515	102247292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387
ENSMUSG00000036678.9_102247961_102259122_1	chr15	-	1156	11	NNC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	72	-1274	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGACATTTCAGAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	102259122	102247960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258392_102258516_102258930
ENSMUSG00000036678.9_102247961_102259122_2	chr15	-	1161	11	ISM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	72	1274	72	-1274	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGACATTTCAGAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	102259122	102247960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
ENSMUSG00000036686.17_84859466_84865128_1	chr8	-	1651	16	ISM	ENSMUSG00000036686.17	ENSMUST00000117424.9	3262	28	9366	9	9366	-9	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCAGCTTTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	84865128	84859465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089
ENSMUSG00000036686.17_84859576_84865211_1	chr8	-	1624	16	ISM	ENSMUSG00000036686.17	ENSMUST00000117424.9	3262	28	9283	119	9283	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCCAAAGATACCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	84865211	84859575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089
ENSMUSG00000036686.17_84859742_84865458_1	chr8	-	1621	17	ISM	ENSMUSG00000036686.17	ENSMUST00000117424.9	3262	28	9036	285	9036	-285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGCATCGGGACAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	84865458	84859741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346
ENSMUSG00000036686.17_84860449_84867104_1	chr8	-	1591	17	ISM	ENSMUSG00000036686.17	ENSMUST00000117424.9	3262	28	7390	992	7390	-992	internal_fragment	TRUE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTAGCCAATGGCAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	84867104	84860448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865456_84865918_84866053_84866869_84866943_84867012
ENSMUSG00000036693.13_34795880_34811913_1	chr5	-	2127	15	ISM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	5579	0	5579	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCTGTGTGGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34811913	34795879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779
ENSMUSG00000036693.13_34796234_34814226_1	chr5	-	2154	15	ISM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	3266	354	3266	-354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGGAACTGTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	34814226	34796233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084
ENSMUSG00000036693.13_34796528_34815353_1	chr5	-	2133	15	ISM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	2139	648	2139	-648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGGGGGACCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	34815353	34796527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218
ENSMUSG00000036693.13_34798216_34817222_1	chr5	-	2039	15	ISM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	270	2336	270	-2336	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGGCCTTCCAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	34817222	34798215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ENSMUSG00000036693.13_34798264_34817280_1	chr5	-	2049	15	ISM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	212	2384	212	-2384	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGTCGAAGCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	34817280	34798263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ENSMUSG00000036693.13_34798328_34817331_1	chr5	-	2036	15	ISM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	161	2448	161	-2448	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACTGCGTGCTCATGTA	NA	NA	NA	NA	NA	NA	NA	NA	34817331	34798327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ENSMUSG00000036693.13_34798671_34817492_1	chr5	-	2159	14	ISM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	0	2791	0	-2791	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTATGTGTGACACCCC	NA	NA	NA	NA	NA	NA	NA	NA	34817492	34798670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ENSMUSG00000036698.12_72978738_72985572_1	chr15	-	479	4	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	71096	477	71096	-477	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTACCAAGTTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	72985572	72978737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72978866_72979013_72979214_72983535_72983671_72985556
ENSMUSG00000036698.12_72978814_72985622_1	chr15	-	453	4	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	71046	553	71046	-553	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCAAGGCGGTCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	72985622	72978813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72978866_72979013_72979214_72983535_72983671_72985556
ENSMUSG00000036698.12_72979182_72988244_1	chr15	-	455	4	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	68424	921	68424	-921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGATGACAATCGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	72988244	72979181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72979214_72983535_72983671_72985556_72985752_72988151
ENSMUSG00000036698.12_72983535_72991240_1	chr15	-	477	4	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	65428	5274	65428	-5274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCAGAGCCCCACGGCT	NA	NA	NA	NA	NA	NA	NA	NA	72991240	72983534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72983671_72985556_72985752_72988151_72988243_72991185
ENSMUSG00000036698.12_72985555_72991345_1	chr15	-	448	3	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	65323	7294	65323	-7294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGCTCTGCCATCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	72991345	72985554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72985752_72988151_72988243_72991185
ENSMUSG00000036698.12_72988194_72995222_1	chr15	-	445	4	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	61446	9933	61446	-9933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCACCAGCTGGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	72995222	72988193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72988243_72991185_72991346_72992912_72993098_72995171
ENSMUSG00000036698.12_72991235_72995747_1	chr15	-	452	4	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	60921	12974	60921	-12974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGTCAAACTGGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	72995747	72991234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72991346_72992912_72993098_72995171_72995306_72995725
ENSMUSG00000036698.12_72991290_72995796_1	chr15	-	446	4	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	60872	13029	60872	-13029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGAACGTGCAGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	72995796	72991289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72991346_72992912_72993098_72995171_72995306_72995725
ENSMUSG00000036698.12_72992990_72996065_1	chr15	-	452	4	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	60603	14729	60603	-14729	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCCGACACCTGAAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	72996065	72992989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72993098_72995171_72995306_72995725_72995849_72995978
ENSMUSG00000036698.12_72993081_72997064_1	chr15	-	446	5	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	59604	14820	59604	-14820	internal_fragment	TRUE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGAAGATCTCGAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	72997064	72993080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012
ENSMUSG00000036698.12_72995260_72998324_1	chr15	-	466	5	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	58344	16999	58344	-16999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCAGTTCCACACGGGC	NA	NA	NA	NA	NA	NA	NA	NA	72998324	72995259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295
ENSMUSG00000036698.12_72995803_72998850_1	chr15	-	450	5	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	57818	17542	57818	-17542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCATGGTGAAAGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	72998850	72995802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802
ENSMUSG00000036698.12_72996058_73000234_1	chr15	-	474	5	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	56434	17797	56434	-17797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGACAATCAGACCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	73000234	72996057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172
ENSMUSG00000036698.12_72997107_73002764_1	chr15	-	469	5	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	53904	18846	53904	-18846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAAGGACAGGCACAAGC	NA	NA	NA	NA	NA	NA	NA	NA	73002764	72997106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709
ENSMUSG00000036698.12_72998876_73009909_1	chr15	-	449	4	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	46759	20615	46759	-20615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGTATTGAAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	73009909	72998875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72998938_73000172_73000310_73002709_73002892_73009841
ENSMUSG00000036698.12_73000271_73018315_1	chr15	-	439	4	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	38353	22010	38353	-22010	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTTCCAACCCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	73018315	73000270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_73000310_73002709_73002892_73009841_73009963_73018218
ENSMUSG00000036698.12_73000271_73018375_1	chr15	-	499	4	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	38293	22010	38293	-22010	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTTCCAACCCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	73018375	73000270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_73000310_73002709_73002892_73009841_73009963_73018218
ENSMUSG00000036698.12_73002805_73056660_1	chr15	-	455	4	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	8	24544	8	-24544	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTACACGATGCACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	73056660	73002804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_73002892_73009841_73009963_73018218_73018415_73056609
ENSMUSG00000036707.17_85721262_85778706_1	chr1	+	3114	9	FSM	ENSMUSG00000036707.17	ENSMUST00000113360.8	3805	9	100	591	100	-589	multi-exon	FALSE	canonical	NA	NA	NA	NA	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCTCAGCTGGGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	85721261	85778706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_85721543_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ENSMUSG00000036707.17_85721385_85778773_1	chr1	+	3058	9	FSM	ENSMUSG00000036707.17	ENSMUST00000113360.8	3805	9	223	524	223	-522	multi-exon	FALSE	canonical	NA	NA	NA	NA	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCAGGATTTGGTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	85721384	85778773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_85721543_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ENSMUSG00000036707.17_85721427_85778867_1	chr1	+	3110	9	FSM	ENSMUSG00000036707.17	ENSMUST00000113360.8	3805	9	265	430	265	-428	multi-exon	FALSE	canonical	NA	NA	NA	NA	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACTTGGGCTAACACAG	NA	NA	NA	NA	NA	NA	NA	NA	85721426	85778867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_85721543_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ENSMUSG00000036707.17_85721817_85776045_1	chr1	+	930	8	ISM	ENSMUSG00000036707.17	ENST00000410084.7	1219	9	8	893	8	-893	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTACATCAGCAAGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	85721816	85776045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85721963_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997
ENSMUSG00000036707.17_85721873_85776090_1	chr1	+	919	8	ISM	ENSMUSG00000036707.17	ENST00000410084.7	1219	9	64	848	64	-848	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCGAGACAAGAGCCGCAA	NA	NA	NA	NA	NA	NA	NA	NA	85721872	85776090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85721963_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997
ENSMUSG00000036707.17_85721899_85776102_1	chr1	+	904	8	NNC	ENSMUSG00000036707.17	novel	1219	9	NA	NA	90	-836	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGCAACATCCAGTTCGA	NA	NA	NA	NA	NA	NA	NA	NA	85721898	85776102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_85721963_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775998
ENSMUSG00000036707.17_85746118_85776832_1	chr1	+	919	8	ISM	ENSMUSG00000036707.17	ENST00000410084.7	1219	9	24309	106	23886	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCAAGTTTCAGAACGAC	NA	NA	NA	NA	NA	NA	NA	NA	85746117	85776832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ENSMUSG00000036707.17_85763042_85776938_1	chr1	+	910	7	ISM	ENSMUSG00000036707.17	ENST00000410084.7	1219	9	41233	0	40810	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTACTCAGCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	85763041	85776938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ENSMUSG00000036707.17_85763042_85776938_2	chr1	+	901	7	NNC	ENSMUSG00000036707.17	novel	1219	9	NA	NA	40810	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTACTCAGCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	85763041	85776938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776133_85776753
ENSMUSG00000036712.16_89423656_89462525_1	chr8	+	2339	12	ISM	ENSMUSG00000036712.16	ENST00000569418.5	3469	17	-1	11484	0	-11484	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTCAAGCTGTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	89423655	89462525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89423728_89431832_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458
ENSMUSG00000036712.16_89431850_89467960_1	chr8	+	2292	12	ISM	ENSMUSG00000036712.16	ENSMUST00000109626.4	7945	16	0	10613	0	-6049	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTATGGAAAAAAATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	89431849	89467960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918
ENSMUSG00000036712.16_89431850_89468009_1	chr8	+	2341	12	ISM	ENSMUSG00000036712.16	ENSMUST00000109626.4	7945	16	0	10564	0	-6000	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAATGGTCTTTTATCAA	NA	NA	NA	NA	NA	NA	NA	NA	89431849	89468009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918
ENSMUSG00000036712.16_89431992_89468931_1	chr8	+	2259	13	ISM	ENSMUSG00000036712.16	ENSMUST00000109626.4	7945	16	142	9642	142	-5078	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGATGCCTCGGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	89431991	89468931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913
ENSMUSG00000036712.16_89432042_89468991_1	chr8	+	2269	13	ISM	ENSMUSG00000036712.16	ENSMUST00000109626.4	7945	16	192	9582	192	-5018	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTAAATATAACAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	89432041	89468991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913
ENSMUSG00000036712.16_89432263_89471926_1	chr8	+	2288	15	ISM	ENSMUSG00000036712.16	ENSMUST00000109626.4	7945	16	413	6647	413	-2083	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCCTGTCAGAAGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	89432262	89471926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836
ENSMUSG00000036712.16_89432330_89471964_1	chr8	+	2259	15	ISM	ENSMUSG00000036712.16	ENSMUST00000109626.4	7945	16	480	6609	480	-2045	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGAAACGAGCCACTATG	NA	NA	NA	NA	NA	NA	NA	NA	89432329	89471964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836
ENSMUSG00000036712.16_89432460_89473498_1	chr8	+	2260	16	FSM	ENSMUSG00000036712.16	ENSMUST00000109626.4	7945	16	610	5075	610	-511	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGTGGGAGAGTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	89432459	89473498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ENSMUSG00000036712.16_89433810_89473674_1	chr8	+	2295	15	ISM	ENSMUSG00000036712.16	ENSMUST00000109626.4	7945	16	1960	4899	1960	-335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTAGTGCTGTGTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	89433809	89473674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ENSMUSG00000036712.16_89433895_89473714_1	chr8	+	2250	15	ISM	ENSMUSG00000036712.16	ENSMUST00000109626.4	7945	16	2045	4859	2045	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACCCATTGCCGGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	89433894	89473714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ENSMUSG00000036712.16_89433943_89473775_1	chr8	+	2263	15	ISM	ENSMUSG00000036712.16	ENSMUST00000109626.4	7945	16	2093	4798	2093	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCCAAACAAATTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	89433942	89473775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ENSMUSG00000036712.16_89436563_89473891_1	chr8	+	2258	14	ISM	ENSMUSG00000036712.16	ENSMUST00000109626.4	7945	16	4713	4682	4713	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACTTTAAGTTAACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	89436562	89473891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ENSMUSG00000036712.16_89436590_89474024_1	chr8	+	2364	14	ISM	ENSMUSG00000036712.16	ENSMUST00000109626.4	7945	16	4740	4549	4740	15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTCCTTTTGTAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	89436589	89474024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ENSMUSG00000036733.17_30344249_30349742_1	chr7	-	1253	7	ISM	ENSMUSG00000036733.17	ENSMUST00000042726.14	1784	10	0	3823	0	-3763	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGGGAATTGCGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	30349742	30344248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ENSMUSG00000036748.17_46318251_46320058_1	chr19	-	1397	5	ISM	ENSMUSG00000036748.17	ENSMUST00000235485.2	1790	9	7001	0	6989	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGGCTCCCAAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	46320058	46318250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984
ENSMUSG00000036748.17_46318855_46320240_1	chr19	-	892	6	ISM	ENSMUSG00000036748.17	ENSMUST00000236046.2	1167	10	6807	-128	6807	124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTGGGACAGGGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	46320240	46318854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195
ENSMUSG00000036748.17_46318985_46320495_1	chr19	-	923	7	ISM	ENSMUSG00000036748.17	ENSMUST00000236046.2	1167	10	6552	2	6552	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	46320495	46318984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351
ENSMUSG00000036748.17_46319088_46327047_1	chr19	-	941	9	FSM	ENSMUSG00000036748.17	ENSMUST00000235485.2	1790	9	12	837	0	-103	multi-exon	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCAGACACCCTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	46327047	46319087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321138_46327007
ENSMUSG00000036748.17_46319088_46327047_2	chr19	-	911	9	FSM	ENSMUSG00000036748.17	ENSMUST00000235977.2	1050	9	30	109	0	-103	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCAGACACCCTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	46327047	46319087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320080_46320195_46320258_46320351_46320496_46321056_46321141_46327007
ENSMUSG00000036748.17_46319127_46320375_1	chr19	-	607	7	ISM	ENSMUSG00000036748.17	ENSMUST00000236980.2	999	9	6681	142	6672	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTGCTGGATCCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	46320375	46319126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351
ENSMUSG00000036748.17_46319172_46320495_1	chr19	-	682	7	ISM	ENSMUSG00000036748.17	ENSMUST00000236980.2	999	9	6561	187	6552	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATACATCAACCTCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	46320495	46319171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351
ENSMUSG00000036748.17_46319728_46326771_1	chr19	-	616	6	ISM	ENSMUSG00000036748.17	ENSMUST00000236046.2	1167	10	276	745	276	-743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTCTCTCAGCCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	46326771	46319727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751
ENSMUSG00000036748.17_46319803_46326801_1	chr19	-	571	6	ISM	ENSMUSG00000036748.17	ENSMUST00000236046.2	1167	10	246	820	246	-818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGAGGAAGCTGTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	46326801	46319802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751
ENSMUSG00000036748.17_46319803_46326850_1	chr19	-	620	6	ISM	ENSMUSG00000036748.17	ENSMUST00000236046.2	1167	10	197	820	197	-818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGAGGAAGCTGTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	46326850	46319802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751
ENSMUSG00000036751.8_30316547_30323976_1	chr7	-	194	3	ISM	ENSMUSG00000036751.8	ENSMUST00000075738.6	618	4	1600	261	1563	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAGATCTGACCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	30323976	30316546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30316588_30322839_30322941_30323924
ENSMUSG00000036751.8_30323925_30325576_1	chr7	-	215	2	ISM	ENSMUSG00000036751.8	ENSMUST00000075738.6	618	4	0	7639	0	-7526	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCAGAGTACCATAGTG	NA	NA	NA	NA	NA	NA	NA	NA	30325576	30323924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30324039_30325475
ENSMUSG00000036752.5_25112276_25114246_1	chr2	-	1216	2	ISM	ENSMUSG00000036752.5	ENST00000568866.5	1274	3	359	0	359	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCACAGCCTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	25114246	25112275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25113381_25114135
ENSMUSG00000036752.5_25112411_25114246_1	chr2	-	1076	2	NNC	ENSMUSG00000036752.5	novel	1274	3	NA	NA	359	-91	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACCTGGTGTCCGAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	25114246	25112410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_25113376_25114135
ENSMUSG00000036752.5_25112411_25114666_1	chr2	-	1200	3	FSM	ENSMUSG00000036752.5	ENST00000568866.5	1274	3	-61	135	48	-91	multi-exon	FALSE	canonical	NA	NA	NA	NA	5090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACCTGGTGTCCGAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	25114666	25112410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_25113381_25114135_25114245_25114545
ENSMUSG00000036752.5_25112501_25114035_1	chr2	-	995	2	ISM	ENSMUSG00000036752.5	ENST00000561967.1	1366	4	570	181	570	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTTCCGACGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	25114035	25112500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25113406_25113945
ENSMUSG00000036752.5_25112760_25114666_1	chr2	-	987	4	FSM	ENSMUSG00000036752.5	ENST00000561967.1	1366	4	-61	440	48	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCCTGTGATCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	25114666	25112759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_25113406_25113945_25114057_25114135_25114245_25114545
ENSMUSG00000036752.5_25112760_25114666_2	chr2	-	853	3	FSM	ENSMUSG00000036752.5	ENST00000562809.1	792	3	-61	0	48	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCCTGTGATCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	25114666	25112759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_25113381_25113945_25114057_25114545
ENSMUSG00000036752.5_25113190_25114057_1	chr2	-	296	2	NNC	ENSMUSG00000036752.5	novel	792	3	NA	NA	548	-430	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGTACCCAGACAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	25114057	25113189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_25113381_25113952
ENSMUSG00000036752.5_25113232_25114155_1	chr2	-	275	3	NNC	ENSMUSG00000036752.5	novel	1598	4	NA	NA	450	-472	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGTCTGGGATGGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	25114155	25113231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_25113376_25113945_25114057_25114135
ENSMUSG00000036752.5_25113273_25114215_1	chr2	-	299	3	ISM	ENSMUSG00000036752.5	ENSMUST00000043584.5	1598	4	499	1101	390	-513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGGGCTTCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	25114215	25113272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_25113381_25113945_25114057_25114135
ENSMUSG00000036752.5_25113282_25114215_1	chr2	-	285	3	NNC	ENSMUSG00000036752.5	novel	1598	4	NA	NA	390	-522	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCCTGCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	25114215	25113281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_25113376_25113945_25114057_25114135
ENSMUSG00000036769.15_23559290_23647181_1	chrX	+	2020	10	NNC	ENSMUSG00000036769.15	novel	4167	20	NA	NA	0	-24984	intron_retention	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTCATTTCTTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	23559289	23647181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_23559779_23598556_23598591_23622678_23623329_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041
ENSMUSG00000036769.15_23559398_23654404_1	chrX	+	2090	12	NNC	ENSMUSG00000036769.15	novel	3873	18	NA	NA	61	-17761	intron_retention	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATTATTATTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	23559397	23654404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_23559779_23598556_23598591_23622678_23623329_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290
ENSMUSG00000036769.15_23559616_23667006_1	chrX	+	2029	14	NNC	ENSMUSG00000036769.15	novel	3873	18	NA	NA	279	-5159	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTAGAGGACGCAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	23559615	23667006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_23559779_23598556_23598591_23622678_23623329_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666972
ENSMUSG00000036769.15_23559673_23647103_1	chrX	+	1630	11	ISM	ENSMUSG00000036769.15	ENST00000371825.7	4032	20	336	25062	336	-25062	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACATAGTGAGAATATGGG	NA	NA	NA	NA	NA	NA	NA	NA	23559672	23647103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041
ENSMUSG00000036769.15_23559692_23667037_1	chrX	+	1984	14	NNC	ENSMUSG00000036769.15	novel	3873	18	NA	NA	355	-5128	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTGGCATTGAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	23559691	23667037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_23559779_23598556_23598591_23622678_23623329_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666972
ENSMUSG00000036769.15_23559753_23667078_1	chrX	+	1964	14	NNC	ENSMUSG00000036769.15	novel	3873	18	NA	NA	416	-5087	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATAGTATTCCAAACCAT	NA	NA	NA	NA	NA	NA	NA	NA	23559752	23667078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_23559779_23598556_23598591_23622678_23623329_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666972
ENSMUSG00000036769.15_23598556_23667394_1	chrX	+	2051	14	NNC	ENSMUSG00000036769.15	novel	3873	18	NA	NA	39219	-4771	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATTGGCACTAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	23598555	23667394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_23598591_23622678_23623329_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666972_23667075_23667278
ENSMUSG00000036769.15_23622726_23668576_1	chrX	+	1988	14	ISM	ENSMUSG00000036769.15	ENST00000371822.9	3873	18	63453	3609	63389	-3589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGGTTCAGAAGATAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	23622725	23668576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666972_23667075_23667278_23667395_23668553
ENSMUSG00000036769.15_23622885_23666638_1	chrX	+	1618	12	ISM	ENSMUSG00000036769.15	ENST00000371825.7	4032	20	63548	5527	63548	-5527	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAAAGCTCCGCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	23622884	23666638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608
ENSMUSG00000036769.15_23622889_23670044_1	chrX	+	1967	15	ISM	ENSMUSG00000036769.15	ENST00000371822.9	3873	18	63616	2141	63552	-2121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCAAGTTTGATGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	23622888	23670044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666972_23667075_23667278_23667395_23668553_23668682_23670007
ENSMUSG00000036769.15_23622939_23666715_1	chrX	+	1641	12	ISM	ENSMUSG00000036769.15	ENST00000371825.7	4032	20	63602	5450	63602	-5450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCACAGCTGCCAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	23622938	23666715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608
ENSMUSG00000036769.15_23622939_23670097_1	chrX	+	1970	15	ISM	ENSMUSG00000036769.15	ENST00000371822.9	3873	18	63666	2088	63602	-2068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATAAATATGAAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	23622938	23670097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666972_23667075_23667278_23667395_23668553_23668682_23670007
ENSMUSG00000036769.15_23623019_23666760_1	chrX	+	1606	12	ISM	ENSMUSG00000036769.15	ENST00000371825.7	4032	20	63682	5405	63682	-5405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGACATATGATGGTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	23623018	23666760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608
ENSMUSG00000036769.15_23623059_23671243_1	chrX	+	2011	16	ISM	ENSMUSG00000036769.15	ENST00000371822.9	3873	18	63786	942	63722	-922	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATATCAGTAAGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	23623058	23671243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ENSMUSG00000036769.15_23623169_23667301_1	chrX	+	1621	14	ISM	ENSMUSG00000036769.15	ENST00000371825.7	4032	20	63832	4864	63832	-4864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATCAGACTGTATGATC	NA	NA	NA	NA	NA	NA	NA	NA	23623168	23667301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278
ENSMUSG00000036769.15_23623188_23671335_1	chrX	+	1974	16	ISM	ENSMUSG00000036769.15	ENST00000371822.9	3873	18	63915	850	63851	-830	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAAATATAATATATATTT	NA	NA	NA	NA	NA	NA	NA	NA	23623187	23671335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ENSMUSG00000036769.15_23623204_23667385_1	chrX	+	1670	14	ISM	ENSMUSG00000036769.15	ENST00000371825.7	4032	20	63867	4780	63867	-4780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTCAGGTAAATTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	23623203	23667385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278
ENSMUSG00000036769.15_23623247_23671403_1	chrX	+	1983	16	ISM	ENSMUSG00000036769.15	ENST00000371822.9	3873	18	63974	782	63910	-762	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAATGTGGTTAGATT	NA	NA	NA	NA	NA	NA	NA	NA	23623246	23671403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ENSMUSG00000036769.15_23624382_23671508_1	chrX	+	1962	15	ISM	ENSMUSG00000036769.15	ENST00000371822.9	3873	18	65109	677	65045	-657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATTAATATATTAATCAC	NA	NA	NA	NA	NA	NA	NA	NA	23624381	23671508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ENSMUSG00000036769.15_23624420_23671574_1	chrX	+	1990	15	ISM	ENSMUSG00000036769.15	ENST00000371822.9	3873	18	65147	611	65083	-591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTTGGTGGCTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	23624419	23671574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ENSMUSG00000036769.15_23625420_23670145_1	chrX	+	1671	14	ISM	ENSMUSG00000036769.15	ENST00000371825.7	4032	20	66083	2020	66083	-2020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCAGTTTTATTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	23625419	23670145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668577_23668682_23670007
ENSMUSG00000036769.15_23625420_23671707_1	chrX	+	2080	14	ISM	ENSMUSG00000036769.15	ENST00000371822.9	3873	18	66147	478	66083	-458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTTTCAATAGGTCAATA	NA	NA	NA	NA	NA	NA	NA	NA	23625419	23671707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ENSMUSG00000036769.15_23627687_23671198_1	chrX	+	1597	14	ISM	ENSMUSG00000036769.15	ENST00000371825.7	4032	20	68350	967	68350	-967	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAGGAAAACTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	23627686	23671198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668577_23668682_23670007_23670143_23671127
ENSMUSG00000036769.15_23628535_23671870_1	chrX	+	1989	12	ISM	ENSMUSG00000036769.15	ENST00000371822.9	3873	18	69262	315	69198	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAGAATTCTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	23628534	23671870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ENSMUSG00000036769.15_23647041_23671707_1	chrX	+	1671	10	ISM	ENSMUSG00000036769.15	ENST00000371825.7	4032	20	87704	458	87704	-458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTTTCAATAGGTCAATA	NA	NA	NA	NA	NA	NA	NA	NA	23647040	23671707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668577_23668682_23670007_23670143_23671127
ENSMUSG00000036769.15_23647041_23672229_1	chrX	+	2025	9	ISM	ENSMUSG00000036769.15	ENST00000371822.9	3873	18	87768	-44	87704	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAATAAATGATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	23647040	23672229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ENSMUSG00000036769.15_23654329_23671896_1	chrX	+	1617	8	ISM	ENSMUSG00000036769.15	ENST00000371825.7	4032	20	94992	269	94992	-269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACCAGGCTTTGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	23654328	23671896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668577_23668682_23670007_23670143_23671127
ENSMUSG00000036769.15_23666609_23672229_1	chrX	+	1751	6	ISM	ENSMUSG00000036769.15	ENST00000371825.7	4032	20	107272	-64	107272	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAATAAATGATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	23666608	23672229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_23666801_23666972_23667075_23667278_23667395_23668577_23668682_23670007_23670143_23671127
ENSMUSG00000036777.9_22243776_22245356_1	chr9	-	753	2	ISM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	55128	468	55128	-468	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTCAGGCTTTACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	22245356	22243775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_22244470_22245297
ENSMUSG00000036777.9_22243940_22249286_1	chr9	-	762	3	ISM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	51198	632	51198	-632	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGCAGCAAACACTAGT	NA	NA	NA	NA	NA	NA	NA	NA	22249286	22243939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_22244470_22245297_22245471_22249227
ENSMUSG00000036777.9_22269981_22279749_1	chr9	-	773	6	ISM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	20735	26673	20735	-26673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGTGGATGAAGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	22279749	22269980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681
ENSMUSG00000036777.9_22272160_22284509_1	chr9	-	759	6	ISM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	15975	28852	15975	-28852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGATAGCCTCGGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	22284509	22272159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436
ENSMUSG00000036777.9_22274155_22286379_1	chr9	-	757	6	ISM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	14105	30847	14105	-30847	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGACATCTTCAGTGACGTC	NA	NA	NA	NA	NA	NA	NA	NA	22286379	22274154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222
ENSMUSG00000036777.9_22279754_22287600_1	chr9	-	736	5	ISM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	12884	36446	12884	-36446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGACTTCTGTAACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	22287600	22279753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432
ENSMUSG00000036777.9_22284530_22291429_1	chr9	-	782	4	ISM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	9055	41222	9055	-41222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATCACTCCAAATACAAA	NA	NA	NA	NA	NA	NA	NA	NA	22291429	22284529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_22284628_22286222_22286437_22287432_22287819_22291345
ENSMUSG00000036777.9_22286329_22291614_1	chr9	-	763	3	ISM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	8870	43021	8870	-43021	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCATGTGAGAAGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	22291614	22286328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_22286437_22287432_22287819_22291345
ENSMUSG00000036777.9_22287485_22293585_1	chr9	-	759	3	ISM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	6899	44177	6899	-44177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAATGCTGCCCATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	22293585	22287484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_22287819_22291345_22291652_22293466
ENSMUSG00000036777.9_22287593_22300327_1	chr9	-	751	4	ISM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	157	44285	157	-44285	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCTGCAAGTGGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	22300327	22287592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_22287819_22291345_22291652_22293466_22293624_22300265
ENSMUSG00000036777.9_22287717_22300484_1	chr9	-	784	4	ISM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	0	44409	0	-44409	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAAGGGGCCGTCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	22300484	22287716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_22287819_22291345_22291652_22293466_22293624_22300265
ENSMUSG00000036781.14_66853448_66856642_1	chr9	+	267	4	FSM	ENSMUSG00000036781.14	ENSMUST00000040917.14	499	4	80	152	75	-152	multi-exon	FALSE	canonical	NA	NA	NA	NA	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGAAGTTCCGGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	66853447	66856642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66856610
ENSMUSG00000036781.14_66854152_66856750_1	chr9	+	315	3	NNC	ENSMUSG00000036781.14	novel	499	4	NA	NA	779	-44	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTATTTTGGTGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	66854151	66856750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_66854216_66854868_66854980_66856610
ENSMUSG00000036781.14_66854154_66856750_1	chr9	+	319	3	ISM	ENSMUSG00000036781.14	ENSMUST00000040917.14	499	4	786	44	781	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTATTTTGGTGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	66854153	66856750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_66854222_66854868_66854980_66856610
ENSMUSG00000036781.14_66854924_66856795_1	chr9	+	239	2	NNC	ENSMUSG00000036781.14	novel	575	5	NA	NA	1551	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTCCTCCCTCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	66854923	66856795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_66854980_66856612
ENSMUSG00000036782.14_23086543_23102103_1	chrX	-	1302	3	ISM	ENSMUSG00000036782.14	ENST00000371876.5	3738	8	28159	1018	28159	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCCCCTTAAGTAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	23102103	23086542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_23087092_23094812_23094927_23101464
ENSMUSG00000036782.14_23086923_23114404_1	chrX	-	1330	5	ISM	ENSMUSG00000036782.14	ENST00000371876.5	3738	8	15858	1398	15858	-634	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGATGATGTCCTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	23114404	23086922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350
ENSMUSG00000036782.14_23087000_23114428_1	chrX	-	1277	5	ISM	ENSMUSG00000036782.14	ENST00000371876.5	3738	8	15834	1475	15834	-711	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGCCTACACTGCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	23114428	23086999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350
ENSMUSG00000036782.14_23094812_23127812_1	chrX	-	1380	5	ISM	ENSMUSG00000036782.14	ENST00000371876.5	3738	8	2450	9287	2450	-8523	internal_fragment	TRUE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACAAATACCCTGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	23127812	23094811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673
ENSMUSG00000036782.14_23101465_23160519_1	chrX	-	1331	5	ISM	ENSMUSG00000036782.14	ENST00000469946.5	2329	8	1813	15176	1813	-15176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTTTCTACTTATAC	NA	NA	NA	NA	NA	NA	NA	NA	23160519	23101464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453
ENSMUSG00000036782.14_23101585_23162397_1	chrX	-	1357	6	ISM	ENSMUSG00000036782.14	ENST00000469946.5	2329	8	-65	15296	-65	-15296	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCGATACAACAAATGGATC	NA	NA	NA	NA	NA	NA	NA	NA	23162397	23101584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23162251
ENSMUSG00000036810.17_88845435_88861608_1	chr8	+	1567	6	FSM	ENSMUSG00000036810.17	ENSMUST00000095214.10	1731	6	38	126	0	-126	multi-exon	FALSE	canonical	NA	NA	NA	NA	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATTGCAGCAATAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	88845434	88861608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88860415
ENSMUSG00000036817.15_139209433_139231143_1	chr5	+	2150	18	ISM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	23041	4452	11651	-3161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTGGGGTCCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	139209432	139231143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083
ENSMUSG00000036817.15_139209433_139231199_1	chr5	+	2206	18	ISM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	23041	4396	11651	-3105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTGCAGTTCACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	139209432	139231199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083
ENSMUSG00000036817.15_139211031_139232532_1	chr5	+	2170	18	ISM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	24639	3063	13249	-1772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACATTCACCATGGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	139211030	139232532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447
ENSMUSG00000036817.15_139211031_139232593_1	chr5	+	2231	18	ISM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	24639	3002	13249	-1711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAAGACTTTGCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	139211030	139232593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447
ENSMUSG00000036817.15_139211141_139233866_1	chr5	+	2185	19	ISM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	24749	1729	13359	-438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTCACCTATGACCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	139211140	139233866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824
ENSMUSG00000036817.15_139212498_139234261_1	chr5	+	2199	18	ISM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	26106	1334	14716	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCACGGAGAGCCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	139212497	139234261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUSG00000036817.15_139215508_139234398_1	chr5	+	2193	17	ISM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	29116	1197	17726	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTCCTGAGGACGTG	NA	NA	NA	NA	NA	NA	NA	NA	139215507	139234398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUSG00000036817.15_139216560_139234582_1	chr5	+	2153	16	ISM	ENSMUSG00000036817.15	ENSMUST00000078690.13	2608	22	30125	-278	18778	184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAAGGCTGAGAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	139216559	139234582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUSG00000036817.15_139216973_139234715_1	chr5	+	2161	15	ISM	ENSMUSG00000036817.15	ENSMUST00000078690.13	2608	22	30538	-411	19191	317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAGAGGCTATGTCATAG	NA	NA	NA	NA	NA	NA	NA	NA	139216972	139234715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUSG00000036817.15_139220494_139235035_1	chr5	+	2157	11	ISM	ENSMUSG00000036817.15	ENSMUST00000110882.8	2454	19	22712	-637	22712	-515	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTCAAATTTGGGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	139220493	139235035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUSG00000036817.15_139221332_139235150_1	chr5	+	2093	10	ISM	ENSMUSG00000036817.15	ENSMUST00000110882.8	2454	19	23550	-752	23550	-400	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGGTTAGACAGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	139221331	139235150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUSG00000036817.15_139222402_139235331_1	chr5	+	2121	9	ISM	ENSMUSG00000036817.15	ENSMUST00000110882.8	2454	19	24620	-933	24620	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTACATGCAGAAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	139222401	139235331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUSG00000036817.15_139222438_139235397_1	chr5	+	2151	9	ISM	ENSMUSG00000036817.15	ENSMUST00000110882.8	2454	19	24656	-999	24656	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATATTTATTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	139222437	139235397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUSG00000036817.15_139224580_139235595_1	chr5	+	2255	7	ISM	ENSMUSG00000036817.15	ENSMUST00000110882.8	2454	19	26798	-1197	26798	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	139224579	139235595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUSG00000036820.13_24374807_24382740_1	chr17	-	1489	11	NNC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2967	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	24382740	24374806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_24375060_24375544_24375640_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555
ENSMUSG00000036820.13_24374960_24377170_1	chr17	-	720	5	ISM	ENSMUSG00000036820.13	ENST00000302956.8	1463	10	5474	73	5141	-73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGGAAAGGACACTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	24377170	24374959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24375060_24375544_24375647_24376501_24376822_24376891_24377037_24377117
ENSMUSG00000036820.13_24374993_24377163_1	chr17	-	468	5	ISM	ENSMUSG00000036820.13	ENST00000648227.1	1167	9	5148	106	5148	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGAGGAAGCTGGGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	24377163	24374992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24375060_24375544_24375647_24376713_24376822_24376891_24377037_24377117
ENSMUSG00000036820.13_24375048_24377347_1	chr17	-	732	6	ISM	ENSMUSG00000036820.13	ENST00000302956.8	1463	10	5297	161	4964	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACGACACTCTCCATGTC	NA	NA	NA	NA	NA	NA	NA	NA	24377347	24375047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24375060_24375544_24375647_24376501_24376822_24376891_24377037_24377117_24377207_24377283
ENSMUSG00000036820.13_24375571_24377376_1	chr17	-	511	5	ISM	ENSMUSG00000036820.13	ENST00000648227.1	1167	9	4935	684	4935	-684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTGGACTTTGGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	24377376	24375570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24375647_24376713_24376822_24376891_24377037_24377117_24377207_24377283
ENSMUSG00000036820.13_24375577_24377381_1	chr17	-	722	5	ISM	ENSMUSG00000036820.13	ENST00000302956.8	1463	10	5263	690	4930	-690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGGAGCCTGGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	24377381	24375576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24375647_24376501_24376822_24376891_24377037_24377117_24377207_24377283
ENSMUSG00000036820.13_24375633_24377417_1	chr17	-	490	5	ISM	ENSMUSG00000036820.13	ENST00000648227.1	1167	9	4894	746	4894	-746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCCTGGAAGCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	24377417	24375632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24375647_24376713_24376822_24376891_24377037_24377117_24377207_24377283
ENSMUSG00000036822.7_40260623_40268397_1	chr4	-	2553	2	ISM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	1453	1022	1453	-1022	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGCATAAGAAACACC	NA	NA	NA	NA	NA	NA	NA	NA	40268397	40260622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40263082_40268303
ENSMUSG00000036822.7_40260751_40269699_1	chr4	-	2555	3	FSM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	151	1150	151	-1150	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATCAGACAGAGAGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	40269699	40260750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_40263082_40268303_40268502_40269673
ENSMUSG00000036822.7_40260805_40269750_1	chr4	-	2552	3	FSM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	100	1204	100	-1204	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAATTGGATGGCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	40269750	40260804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_40263082_40268303_40268502_40269673
ENSMUSG00000036822.7_40260862_40269850_1	chr4	-	2595	3	FSM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	0	1261	0	-1261	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCAGCCGGCTCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	40269850	40260861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_40263082_40268303_40268502_40269673
ENSMUSG00000036825.13_146124029_146144988_1	chr3	+	2209	12	ISM	ENSMUSG00000036825.13	ENSMUST00000106153.9	3446	14	13632	911	0	327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGTGATTTTGGGATTA	NA	NA	NA	NA	NA	NA	NA	NA	146124028	146144988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ENSMUSG00000036825.13_146124073_146145046_1	chr3	+	2223	12	ISM	ENSMUSG00000036825.13	ENSMUST00000106153.9	3446	14	13676	853	44	385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTATGTTAAGAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	146124072	146145046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ENSMUSG00000036825.13_146124133_146145087_1	chr3	+	2204	12	ISM	ENSMUSG00000036825.13	ENSMUST00000106153.9	3446	14	13736	812	104	426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	854	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTGAGTATAGCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	146124132	146145087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ENSMUSG00000036825.13_146124887_146145236_1	chr3	+	2289	11	ISM	ENSMUSG00000036825.13	ENSMUST00000106153.9	3446	14	14490	663	858	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAACTAGAACTACTAAC	NA	NA	NA	NA	NA	NA	NA	NA	146124886	146145236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ENSMUSG00000036825.13_146128649_146145381_1	chr3	+	2220	10	ISM	ENSMUSG00000036825.13	ENSMUST00000106153.9	3446	14	18252	518	4620	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	926	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCATTGGGTTGAGATA	NA	NA	NA	NA	NA	NA	NA	NA	146128648	146145381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ENSMUSG00000036825.13_146132076_146145537_1	chr3	+	2265	9	ISM	ENSMUSG00000036825.13	ENSMUST00000106153.9	3446	14	21679	362	8047	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCCCTCTACTAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	146132075	146145537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ENSMUSG00000036825.13_146133786_146145752_1	chr3	+	2222	7	ISM	ENSMUSG00000036825.13	ENSMUST00000106153.9	3446	14	23389	147	9757	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1695	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCAGCTTTTAAGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	146133785	146145752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ENSMUSG00000036835.8_30261484_30262262_1	chr7	-	412	2	FSM	ENSMUSG00000036835.8	ENST00000591949.1	585	2	102	71	94	-71	multi-exon	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCCCCGCTGGGGCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	30262262	30261483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30261854_30262220
ENSMUSG00000036835.8_30261647_30262356_1	chr7	-	343	2	FSM	ENSMUSG00000036835.8	ENST00000591949.1	585	2	8	234	0	-234	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGATGAACGGGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	30262356	30261646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30261854_30262220
ENSMUSG00000036840.6_87451745_87455047_1	chr8	-	786	2	FSM	ENSMUSG00000036840.6	ENST00000356721.3	2102	2	132	1184	132	-1110	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCAACAGCCATTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	87455047	87451744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_87452485_87455001
ENSMUSG00000036845.13_30254869_30258889_1	chr7	-	813	9	FSM	ENSMUSG00000036845.13	ENSMUST00000043975.11	998	9	182	3	182	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACAAATCTCAAGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	30258889	30254868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257384_30258866
ENSMUSG00000036845.13_30254869_30258932_1	chr7	-	856	9	FSM	ENSMUSG00000036845.13	ENSMUST00000043975.11	998	9	139	3	139	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACAAATCTCAAGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	30258932	30254868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257384_30258866
ENSMUSG00000036845.13_30254869_30258943_1	chr7	-	993	9	FSM	ENSMUSG00000036845.13	ENSMUST00000108164.8	1312	9	320	-1	128	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACAAATCTCAAGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	30258943	30254868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257510_30258866
ENSMUSG00000036845.13_30254981_30259064_1	chr7	-	1002	9	FSM	ENSMUSG00000036845.13	ENSMUST00000108164.8	1312	9	199	111	7	-111	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACGGGAGATGTATGAC	NA	NA	NA	NA	NA	NA	NA	NA	30259064	30254980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257510_30258866
ENSMUSG00000036845.13_30255011_30259064_1	chr7	-	846	9	FSM	ENSMUSG00000036845.13	ENSMUST00000043975.11	998	9	7	145	7	-141	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCTTCGCTACTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	30259064	30255010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257384_30258866
ENSMUSG00000036854.15_30252693_30254295_1	chr7	+	790	3	FSM	ENSMUSG00000036854.15	ENSMUST00000044048.8	1363	3	0	573	0	-573	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGACGCTACTGTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	30252692	30254295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_30252958_30253686_30253810_30253893
ENSMUSG00000036854.15_30252884_30254426_1	chr7	+	730	3	FSM	ENSMUSG00000036854.15	ENSMUST00000044048.8	1363	3	191	442	191	-442	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAGTCACCTAATTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	30252883	30254426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_30252958_30253686_30253810_30253893
ENSMUSG00000036854.15_30253724_30254532_1	chr7	+	725	2	ISM	ENSMUSG00000036854.15	ENSMUST00000044048.8	1363	3	1031	336	1031	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTCCTCTGCCCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	30253723	30254532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30253810_30253893
ENSMUSG00000036854.15_30253778_30254588_1	chr7	+	727	2	ISM	ENSMUSG00000036854.15	ENSMUST00000044048.8	1363	3	1085	280	1085	-280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACTATTCTGACTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	30253777	30254588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30253810_30253893
ENSMUSG00000036860.15_59093331_59096714_1	chr11	+	681	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	13	246	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTCATTGTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	59093330	59096714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
ENSMUSG00000036860.15_59094996_59096828_1	chr11	+	642	3	ISM	ENSMUSG00000036860.15	ENSMUST00000108785.2	792	4	1665	0	1632	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACTTTTGGGGTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	59094995	59096828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59095082_59095381_59095584_59096474
ENSMUSG00000036860.15_59095379_59096961_1	chr11	+	692	2	ISM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	2061	-1	2015	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACAGCTTCAGACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	59095378	59096961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_59095584_59096474
ENSMUSG00000036873.14_145643945_145644747_1	chr3	+	234	2	ISM	ENSMUSG00000036873.14	ENSMUST00000039571.14	1547	3	176	5837	176	-5837	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCGATCAAATGGTCGAATA	NA	NA	NA	NA	NA	NA	NA	NA	145643944	145644747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_145644084_145644652
ENSMUSG00000036879.16_86602288_86743518_1	chr8	+	1538	16	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	27	43195	27	-43195	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCTGTCTGGAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	86602287	86743518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487
ENSMUSG00000036879.16_86604738_86744125_1	chr8	+	1632	16	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	2477	42588	2477	-42588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	994	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGCTGAGCAGAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	86604737	86744125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020
ENSMUSG00000036879.16_86604825_86745118_1	chr8	+	1566	17	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	2564	41595	2564	-41595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATATTGGAAAATGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	86604824	86745118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097
ENSMUSG00000036879.16_86623057_86748075_1	chr8	+	1630	17	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	20796	38638	20796	-38638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1020	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCCCCTTGAATTACT	NA	NA	NA	NA	NA	NA	NA	NA	86623056	86748075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013
ENSMUSG00000036879.16_86628553_86748231_1	chr8	+	1533	17	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	26292	38482	26292	-38482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	855	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGCAGTACCGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	86628552	86748231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171
ENSMUSG00000036879.16_86648754_86748334_1	chr8	+	1604	16	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	46493	38379	46493	-38379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGCAAGAGATGATCACA	NA	NA	NA	NA	NA	NA	NA	NA	86648753	86748334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171
ENSMUSG00000036879.16_86648842_86749389_1	chr8	+	1539	17	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	46581	37324	46581	-37324	internal_fragment	FALSE	canonical	NA	NA	NA	NA	839	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATCCTGCTGGGTATAC	NA	NA	NA	NA	NA	NA	NA	NA	86648841	86749389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366
ENSMUSG00000036879.16_86667515_86751877_1	chr8	+	1568	17	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	65254	34836	65254	-34836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1010	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCGCACATTACCACCT	NA	NA	NA	NA	NA	NA	NA	NA	86667514	86751877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86751826
ENSMUSG00000036879.16_86668932_86756200_1	chr8	+	1536	17	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	66671	30513	66671	-30513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1003	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACCCACGATGAGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	86668931	86756200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86751826_86751918_86756110
ENSMUSG00000036879.16_86673763_86770473_1	chr8	+	1640	16	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	71502	16240	71502	-16240	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCAGACCCTTTCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	86673762	86770473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86751826_86751918_86756110_86756314_86770338
ENSMUSG00000036879.16_86684213_86776383_1	chr8	+	1538	16	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	81952	10330	81952	-10330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTGGCAGATCCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	86684212	86776383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86751826_86751918_86756110_86756314_86770338_86770474_86776318
ENSMUSG00000036879.16_86697530_86783184_1	chr8	+	1642	16	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	95269	3529	95269	-3529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGTATTTTTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86697529	86783184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86751826_86751918_86756110_86756314_86770338_86770474_86776318_86776449_86783076
ENSMUSG00000036879.16_86737676_86785198_1	chr8	+	1540	16	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	135415	1515	135415	-1515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	965	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAGAAACCCTGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	86737675	86785198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86751826_86751918_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173
ENSMUSG00000036879.16_86738198_86785315_1	chr8	+	1632	15	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	135937	1398	135937	-1398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCAAGAGGCCAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	86738197	86785315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86751826_86751918_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173
ENSMUSG00000036879.16_86743542_86785981_1	chr8	+	1530	15	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	141281	732	141281	-732	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGCAGCTACTTGACGAA	NA	NA	NA	NA	NA	NA	NA	NA	86743541	86785981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86751826_86751918_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ENSMUSG00000036879.16_86745663_86786166_1	chr8	+	1499	12	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	143402	547	143402	-547	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	971	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTGTGGTGGGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	86745662	86786166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86751826_86751918_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ENSMUSG00000036879.16_86745696_86786237_1	chr8	+	1537	12	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	143435	476	143435	-476	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAATGATTGAAATCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	86745695	86786237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86751826_86751918_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ENSMUSG00000036879.16_86745716_86786320_1	chr8	+	1600	12	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	143455	393	143455	-393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATCGAAAATTCACAACT	NA	NA	NA	NA	NA	NA	NA	NA	86745715	86786320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86751826_86751918_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ENSMUSG00000036879.16_86749367_86786511_1	chr8	+	1526	9	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	147106	202	147106	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1067	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTGTAACACACATCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	86749366	86786511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86749449_86750909_86750968_86751826_86751918_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ENSMUSG00000036879.16_86751826_86786714_1	chr8	+	1590	7	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	149565	-1	149565	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAAGTGCCAGTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	86751825	86786714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_86751918_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ENSMUSG00000036880.11_74912268_74939279_1	chr18	+	1510	10	NNC	ENSMUSG00000036880.11	novel	1516	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	74912267	74939279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932240_74934367_74934439_74937071_74937227_74938925
ENSMUSG00000036880.11_74912268_74939279_2	chr18	+	1510	10	NNC	ENSMUSG00000036880.11	novel	1516	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1690	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	74912267	74939279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937221_74938925
ENSMUSG00000036880.11_74912268_74939279_3	chr18	+	1511	10	NNC	ENSMUSG00000036880.11	novel	1516	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2058	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	74912267	74939279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_74912337_74920189_74920357_74925421_74925546_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
ENSMUSG00000036880.11_74912268_74939279_4	chr18	+	1506	10	NNC	ENSMUSG00000036880.11	novel	1516	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	74912267	74939279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937081_74937227_74938925
ENSMUSG00000036880.11_74912268_74939279_5	chr18	+	1509	10	NNC	ENSMUSG00000036880.11	novel	1516	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2072	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	74912267	74939279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928208_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
ENSMUSG00000036880.11_74912268_74939279_6	chr18	+	1508	10	NNC	ENSMUSG00000036880.11	novel	1516	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	74912267	74939279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931390_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
ENSMUSG00000036880.11_74912268_74939279_7	chr18	+	1510	10	NNC	ENSMUSG00000036880.11	novel	1516	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	74912267	74939279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934373_74934439_74937071_74937227_74938925
ENSMUSG00000036880.11_74912268_74939279_8	chr18	+	1508	10	NNC	ENSMUSG00000036880.11	novel	1516	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	74912267	74939279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938933
ENSMUSG00000036890.14_44454846_44460496_1	chr2	-	767	2	ISM	ENSMUSG00000036890.14	ENSMUST00000049051.13	2197	8	185953	419	185953	-412	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	926	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTCTGGCAAAGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	44460496	44454845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44455547_44460430
ENSMUSG00000036890.14_44455145_44482003_1	chr2	-	676	4	ISM	ENSMUSG00000036890.14	ENST00000241391.9	2244	8	233560	711	164446	-711	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGTGGTGCCACATTGA	NA	NA	NA	NA	NA	NA	NA	NA	44482003	44455144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44455547_44460430_44460523_44461224_44461296_44481892
ENSMUSG00000036890.14_44455351_44525146_1	chr2	-	492	4	ISM	ENSMUSG00000036890.14	ENST00000392867.7	2134	7	190417	917	121303	-917	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTGCTTGTCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	44525146	44455350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44455547_44460430_44460523_44461224_44461296_44525013
ENSMUSG00000036890.14_44455411_44525231_1	chr2	-	517	4	ISM	ENSMUSG00000036890.14	ENST00000392867.7	2134	7	190332	977	121218	-977	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGTGTGCCCATATTT	NA	NA	NA	NA	NA	NA	NA	NA	44525231	44455410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44455547_44460430_44460523_44461224_44461296_44525013
ENSMUSG00000036890.14_44455421_44642108_1	chr2	-	764	6	ISM	ENSMUSG00000036890.14	ENST00000241391.9	2244	8	73455	987	4341	-987	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAACTTTCCAGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44642108	44455420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44455547_44460430_44460523_44461224_44461296_44481892_44482003_44525013_44525329_44642058
ENSMUSG00000036890.14_44455430_44642112_1	chr2	-	756	6	NNC	ENSMUSG00000036890.14	novel	2197	8	NA	NA	4337	-996	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGAATCTGAAGAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	44642112	44455429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_44455547_44460430_44460523_44461224_44461296_44481892_44482003_44525016_44525329_44642058
ENSMUSG00000036890.14_44455457_44642174_1	chr2	-	794	6	ISM	ENSMUSG00000036890.14	ENST00000241391.9	2244	8	73389	1023	4275	-1023	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTAAGTCGCAAACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	44642174	44455456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44455547_44460430_44460523_44461224_44461296_44481892_44482003_44525013_44525329_44642058
ENSMUSG00000036890.14_44455488_44465541_1	chr2	-	309	4	ISM	ENSMUSG00000036890.14	ENSMUST00000049051.13	2197	8	180908	1061	180908	-1054	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAACCCAGGGAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	44465541	44455487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44455547_44460430_44460523_44461224_44461296_44465454
ENSMUSG00000036890.14_44455520_44642214_1	chr2	-	771	6	ISM	ENSMUSG00000036890.14	ENST00000241391.9	2244	8	73349	1086	4235	-1086	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTACATGGTAAATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	44642214	44455519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44455547_44460430_44460523_44461224_44461296_44481892_44482003_44525013_44525329_44642058
ENSMUSG00000036890.14_44460490_44646449_1	chr2	-	873	6	ISM	ENSMUSG00000036890.14	ENST00000241391.9	2244	8	69114	6056	0	-6056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACGGCTCAAGAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	44646449	44460489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44460523_44461224_44461296_44481892_44482003_44525013_44525329_44642058_44642233_44646279
ENSMUSG00000036890.14_44465490_44642165_1	chr2	-	327	3	ISM	ENSMUSG00000036890.14	ENST00000409298.5	2074	8	73398	11056	4284	-11056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACAGCCAAGCATGAATT	NA	NA	NA	NA	NA	NA	NA	NA	44642165	44465489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44465600_44481892_44482003_44642058
ENSMUSG00000036890.14_44481922_44715415_1	chr2	-	791	5	ISM	ENSMUSG00000036890.14	ENST00000241391.9	2244	8	148	27488	148	-27488	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGGAGAGACTTTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	44715415	44481921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44482003_44525013_44525329_44642058_44642233_44646279_44646448_44715362
ENSMUSG00000036892.13_30193106_30212463_1	chr7	+	1424	10	NNC	ENSMUSG00000036892.13	novel	1853	10	NA	NA	-42	9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1002	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTCTGTACTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	30193105	30212463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_30193283_30193362_30193554_30193636_30193776_30193862_30193950_30205645_30205727_30205801_30205958_30206035_30206203_30209191_30209303_30210562_30210649_30212234
ENSMUSG00000036892.13_30193106_30212463_2	chr7	+	1425	10	NNC	ENSMUSG00000036892.13	novel	1853	10	NA	NA	-42	9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTCTGTACTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	30193105	30212463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_30193283_30193356_30193554_30193636_30193776_30193862_30193950_30205645_30205727_30205801_30205958_30206035_30206203_30209191_30209303_30210562_30210649_30212239
ENSMUSG00000036892.13_30193106_30212463_3	chr7	+	1424	10	NNC	ENSMUSG00000036892.13	novel	1853	10	NA	NA	-42	9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTCTGTACTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	30193105	30212463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_30193283_30193356_30193554_30193636_30193776_30193862_30193950_30205645_30205727_30205801_30205958_30206035_30206203_30209197_30209303_30210562_30210649_30212234
ENSMUSG00000036892.13_30193106_30212463_4	chr7	+	1425	10	NNC	ENSMUSG00000036892.13	novel	1853	10	NA	NA	-42	9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTCTGTACTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	30193105	30212463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_30193283_30193356_30193554_30193636_30193776_30193862_30193945_30205645_30205727_30205801_30205958_30206035_30206203_30209191_30209303_30210562_30210649_30212234
ENSMUSG00000036892.13_30193106_30212463_5	chr7	+	1423	10	NNC	ENSMUSG00000036892.13	novel	1853	10	NA	NA	-42	9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTCTGTACTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	30193105	30212463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_30193283_30193356_30193554_30193636_30193776_30193862_30193950_30205645_30205727_30205801_30205958_30206035_30206196_30209191_30209303_30210562_30210649_30212234
ENSMUSG00000036892.13_30193106_30212463_6	chr7	+	1430	10	FSM	ENSMUSG00000036892.13	ENSMUST00000058280.13	1853	10	59	364	-42	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTCTGTACTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	30193105	30212463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_30193283_30193356_30193554_30193636_30193776_30193862_30193950_30205645_30205727_30205801_30205958_30206035_30206203_30209191_30209303_30210562_30210649_30212234
ENSMUSG00000036913.16_125521375_125543775_1	chr8	+	399	3	ISM	ENSMUSG00000036913.16	ENST00000366653.6	3179	10	1599	12051	1544	-12051	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGTGACGCCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	125521374	125543775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125521645_125541808_125541905_125543742
ENSMUSG00000036913.16_125521496_125545466_1	chr8	+	398	4	ISM	ENSMUSG00000036913.16	ENST00000366653.6	3179	10	1720	10360	1665	-10360	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGCTACGCCAGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	125521495	125545466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125521645_125541808_125541905_125543742_125543866_125545436
ENSMUSG00000036913.16_125521547_125545518_1	chr8	+	399	4	ISM	ENSMUSG00000036913.16	ENST00000366653.6	3179	10	1771	10308	1716	-10308	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGACGACCCCTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	125521546	125545518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125521645_125541808_125541905_125543742_125543866_125545436
ENSMUSG00000036913.16_125541843_125547021_1	chr8	+	391	4	ISM	ENSMUSG00000036913.16	ENST00000366653.6	3179	10	22067	8805	22012	-8805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGACAGCGAGCCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	125541842	125547021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125541905_125543742_125543866_125545436_125545548_125546926
ENSMUSG00000036913.16_125541891_125547080_1	chr8	+	402	4	ISM	ENSMUSG00000036913.16	ENST00000366653.6	3179	10	22115	8746	22060	-8746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGGTGAGCCGTGATCG	NA	NA	NA	NA	NA	NA	NA	NA	125541890	125547080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125541905_125543742_125543866_125545436_125545548_125546926
ENSMUSG00000036913.16_125543838_125549935_1	chr8	+	374	4	ISM	ENSMUSG00000036913.16	ENST00000366653.6	3179	10	24062	5891	24007	-5891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCATTCACCCACAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	125543837	125549935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125543866_125545436_125545548_125546926_125547087_125549860
ENSMUSG00000036913.16_125545499_125551494_1	chr8	+	393	4	ISM	ENSMUSG00000036913.16	ENST00000366653.6	3179	10	25723	4332	25668	-4332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGCTGCACTTTAATAGCA	NA	NA	NA	NA	NA	NA	NA	NA	125545498	125551494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125545548_125546926_125547087_125549860_125550007_125551456
ENSMUSG00000036913.16_125549971_125552877_1	chr8	+	379	3	ISM	ENSMUSG00000036913.16	ENST00000366653.6	3179	10	30195	2949	30140	-2949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTCAAAGATATGATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	125549970	125552877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125550007_125551456_125551596_125552673
ENSMUSG00000036913.16_125551549_125554885_1	chr8	+	399	3	ISM	ENSMUSG00000036913.16	ENST00000366653.6	3179	10	31773	941	31718	-941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAACAAACACACTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	125551548	125554885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125551596_125552673_125552978_125554837
ENSMUSG00000036913.16_125552750_125555779_1	chr8	+	412	3	ISM	ENSMUSG00000036913.16	ENST00000366653.6	3179	10	32974	47	32919	-47	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGCCAACAAACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	125552749	125555779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125552978_125554837_125555001_125555758
ENSMUSG00000036913.16_125552815_125555825_1	chr8	+	393	3	ISM	ENSMUSG00000036913.16	ENST00000366653.6	3179	10	33039	1	32984	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCTCCCGCTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	125552814	125555825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125552978_125554837_125555001_125555758
ENSMUSG00000036928.15_138295008_138296622_1	chr5	+	449	5	ISM	ENSMUSG00000036928.15	ENST00000456374.2	697	7	46	506	46	-506	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTACTGGCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	138295007	138296622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540
ENSMUSG00000036928.15_138295059_138296823_1	chr5	+	476	6	ISM	ENSMUSG00000036928.15	ENST00000456374.2	697	7	97	305	97	-305	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGGTCTTACCTGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	138295058	138296823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778
ENSMUSG00000036928.15_138295883_138297128_1	chr5	+	470	5	ISM	ENSMUSG00000036928.15	ENSMUST00000162245.8	4123	34	17077	13527	921	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGAGGGTCACCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	138295882	138297128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069
ENSMUSG00000036932.15_47563821_47602303_1	chrX	-	2100	16	FSM	ENSMUSG00000036932.15	ENSMUST00000037349.8	2237	16	137	0	-16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	47602303	47563820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ENSMUSG00000036932.15_47563821_47602303_2	chrX	-	2095	16	NNC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	47602303	47563820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570846_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ENSMUSG00000036932.15_47563821_47602303_3	chrX	-	2092	16	NNC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2036	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	47602303	47563820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_47564066_47564439_47564637_47566581_47566702_47569001_47569145_47570844_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ENSMUSG00000036932.15_47563821_47602303_4	chrX	-	2094	16	NNC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	47602303	47563820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571682_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ENSMUSG00000036932.15_47563821_47602303_5	chrX	-	2094	16	NNC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	47602303	47563820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586330_47588648_47588749_47593686_47593830_47602112
ENSMUSG00000036932.15_47563821_47602303_6	chrX	-	2094	16	NNC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	47602303	47563820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572134_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ENSMUSG00000036932.15_47563821_47602303_7	chrX	-	2093	16	NNC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	47602303	47563820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573506_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ENSMUSG00000036932.15_47563821_47602303_8	chrX	-	2091	16	NNC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	47602303	47563820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_47564066_47564439_47564637_47566576_47566702_47569007_47569145_47570844_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ENSMUSG00000036932.15_47564004_47570911_1	chrX	-	533	5	ISM	ENSMUSG00000036932.15	ENST00000675240.1	2076	16	31475	140	31312	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGATTGAATCCCAATCG	NA	NA	NA	NA	NA	NA	NA	NA	47570911	47564003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_47564066_47564439_47564573_47566576_47566702_47569001_47569145_47570841
ENSMUSG00000036932.15_47564050_47570980_1	chrX	-	556	5	ISM	ENSMUSG00000036932.15	ENST00000675240.1	2076	16	31406	186	31243	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAACATGAAGATCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	47570980	47564049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_47564066_47564439_47564573_47566576_47566702_47569001_47569145_47570841
ENSMUSG00000036932.15_47586209_47602436_1	chrX	-	694	4	ISM	ENSMUSG00000036932.15	ENSMUST00000037349.8	2237	16	4	22388	0	-22345	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGCATGTTATTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	47602436	47586208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_47586336_47588648_47588749_47593686_47593830_47602112
ENSMUSG00000036944.7_66410670_66426940_1	chr15	-	465	4	ISM	ENSMUSG00000036944.7	ENST00000523829.5	769	6	4262	17	4262	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGTCATTTCTGCATACA	NA	NA	NA	NA	NA	NA	NA	NA	66426940	66410669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_66410722_66413421_66413604_66423780_66423951_66426879
ENSMUSG00000036944.7_66413505_66427094_1	chr15	-	479	3	NNC	ENSMUSG00000036944.7	novel	769	6	NA	NA	4108	-2852	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGAAAGCTCCCAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	66427094	66413504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_66413604_66423780_66423951_66426884
ENSMUSG00000036944.7_66413505_66427094_2	chr15	-	484	3	ISM	ENSMUSG00000036944.7	ENST00000523829.5	769	6	4108	2852	4108	-2852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGAAAGCTCCCAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	66427094	66413504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_66413604_66423780_66423951_66426879
ENSMUSG00000036944.7_66413505_66427094_3	chr15	-	483	3	NNC	ENSMUSG00000036944.7	novel	769	6	NA	NA	4108	-2852	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	955	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGAAAGCTCCCAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	66427094	66413504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_66413604_66423781_66423951_66426879
ENSMUSG00000036944.7_66423795_66431198_1	chr15	-	495	4	NNC	ENSMUSG00000036944.7	novel	587	5	NA	NA	4	-13142	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	771	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTTGATGAGAGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	66431198	66423794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_66423951_66426884_66427093_66429593_66429655_66431128
ENSMUSG00000036944.7_66423821_66431171_1	chr15	-	447	4	ISM	ENSMUSG00000036944.7	ENST00000377901.8	587	5	31	13168	31	-13168	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	748	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAATCAGGAGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	66431171	66423820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_66423951_66426879_66427093_66429593_66429655_66431128
ENSMUSG00000036955.17_62394322_62413793_1	chr10	-	1571	4	FSM	ENSMUSG00000036955.17	ENST00000674936.1	1971	4	371	29	371	-29	multi-exon	FALSE	canonical	NA	NA	NA	NA	1719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTTGTAAAATGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	62413793	62394321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_62395663_62406177_62406258_62410828_62410928_62413742
ENSMUSG00000036955.17_62394322_62413793_2	chr10	-	1956	7	FSM	ENSMUSG00000036955.17	ENSMUST00000065887.14	2472	7	443	73	371	-29	multi-exon	FALSE	canonical	NA	NA	NA	NA	1497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTTGTAAAATGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	62413793	62394321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_62395663_62399014_62399131_62401815_62401901_62405237_62405422_62406177_62406258_62410828_62410928_62413742
ENSMUSG00000036955.17_62394428_62414015_1	chr10	-	1687	4	FSM	ENSMUSG00000036955.17	ENST00000674936.1	1971	4	149	135	149	-135	multi-exon	FALSE	canonical	NA	NA	NA	NA	2482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGTTGAATGTGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	62414015	62394427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_62395663_62406177_62406258_62410828_62410928_62413742
ENSMUSG00000036955.17_62394428_62414015_2	chr10	-	2072	7	FSM	ENSMUSG00000036955.17	ENSMUST00000065887.14	2472	7	221	179	149	-135	multi-exon	FALSE	canonical	NA	NA	NA	NA	1762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGTTGAATGTGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	62414015	62394427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_62395663_62399014_62399131_62401815_62401901_62405237_62405422_62406177_62406258_62410828_62410928_62413742
ENSMUSG00000036955.17_62394428_62414015_3	chr10	-	1686	4	NNC	ENSMUSG00000036955.17	novel	1971	4	NA	NA	149	-135	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGTTGAATGTGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	62414015	62394427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_62395663_62406177_62406258_62410829_62410928_62413742
ENSMUSG00000036955.17_62394975_62399051_1	chr10	-	725	2	ISM	ENSMUSG00000036955.17	ENST00000675576.1	2257	6	15113	682	15113	-682	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATCCCAAGAAAGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	62399051	62394974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62395663_62399014
ENSMUSG00000036955.17_62395131_62401900_1	chr10	-	733	3	ISM	ENSMUSG00000036955.17	ENST00000675576.1	2257	6	12264	838	12264	-838	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGAATAAGTCGGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	62401900	62395130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62395663_62399014_62399131_62401815
ENSMUSG00000036955.17_62395522_62413836_1	chr10	-	700	6	FSM	ENSMUSG00000036955.17	ENST00000675576.1	2257	6	328	1229	328	-1229	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGAAAGTGAGATACTT	NA	NA	NA	NA	NA	NA	NA	NA	62413836	62395521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_62395663_62399014_62399131_62401815_62401901_62405237_62405422_62406177_62406258_62413742
ENSMUSG00000036955.17_62395581_62413894_1	chr10	-	699	6	FSM	ENSMUSG00000036955.17	ENST00000675576.1	2257	6	270	1288	270	-1288	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGAAAAGGGCTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	62413894	62395580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_62395663_62399014_62399131_62401815_62401901_62405237_62405422_62406177_62406258_62413742
ENSMUSG00000036955.17_62395626_62413952_1	chr10	-	712	6	FSM	ENSMUSG00000036955.17	ENST00000675576.1	2257	6	212	1333	212	-1333	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCAGAGCTCTACGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	62413952	62395625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_62395663_62399014_62399131_62401815_62401901_62405237_62405422_62406177_62406258_62413742
ENSMUSG00000036955.17_62401816_62414173_1	chr10	-	780	4	ISM	ENSMUSG00000036955.17	ENST00000675576.1	2257	6	-9	7523	-9	-7523	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTGCATGTACATTT	NA	NA	NA	NA	NA	NA	NA	NA	62414173	62401815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62401901_62405237_62405422_62406177_62406258_62413742
ENSMUSG00000036966.16_102026014_102044637_1	chr15	-	1432	11	NNC	ENSMUSG00000036966.16	novel	1439	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTCACCAGTCCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	102044637	102026013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102042057_102044570
ENSMUSG00000036966.16_102026014_102044637_2	chr15	-	1436	11	NNC	ENSMUSG00000036966.16	novel	1439	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTCACCAGTCCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	102044637	102026013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_102026149_102026475_102026642_102026722_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102042064_102044570
ENSMUSG00000036966.16_102026014_102044637_3	chr15	-	1439	11	FSM	ENSMUSG00000036966.16	ENST00000547837.5	1439	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTCACCAGTCCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	102044637	102026013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102042064_102044570
ENSMUSG00000036968.16_138185938_138188808_1	chr5	+	226	3	ISM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	191	3372	191	-3372	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTTCATGCTGAACGCA	NA	NA	NA	NA	NA	NA	NA	NA	138185937	138188808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138185983_138188531_138188659_138188754
ENSMUSG00000036968.16_138188632_138190222_1	chr5	+	247	3	ISM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	2885	1958	2885	-1958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGATGAGACAGCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	138188631	138190222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138188659_138188754_138188852_138190099
ENSMUSG00000036968.16_138190167_138191077_1	chr5	+	225	3	ISM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	4420	1103	4420	-1103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGCAGATGACGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	138190166	138191077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138190223_138190822_138190941_138191026
ENSMUSG00000036972.15_91251023_91266451_1	chr9	+	727	3	FSM	ENSMUSG00000036972.15	ENST00000491672.5	829	3	171	-69	0	69	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTCTGGGCCCAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	91251022	91266451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_91251280_91254660_91254746_91266066
ENSMUSG00000036972.15_91260842_91268816_1	chr9	+	1159	3	FSM	ENSMUSG00000036972.15	ENSMUST00000066384.7	3891	3	147	2585	4	-75	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTGTGTATACAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	91260841	91268816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_91261456_91266066_91266383_91268587
ENSMUSG00000036972.15_91260842_91268816_2	chr9	+	1158	3	NNC	ENSMUSG00000036972.15	novel	1242	3	NA	NA	4	-75	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTGTGTATACAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	91260841	91268816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_91261456_91266071_91266387_91268587
ENSMUSG00000036972.15_91260957_91268891_1	chr9	+	1119	3	FSM	ENSMUSG00000036972.15	ENSMUST00000066384.7	3891	3	262	2510	119	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGCGAATGGGCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	91260956	91268891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_91261456_91266066_91266383_91268587
ENSMUSG00000036972.15_91260957_91268891_2	chr9	+	1118	3	NNC	ENSMUSG00000036972.15	novel	1242	3	NA	NA	119	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGCGAATGGGCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	91260956	91268891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_91261456_91266071_91266387_91268587
ENSMUSG00000036972.15_91266120_91269134_1	chr9	+	814	2	ISM	ENSMUSG00000036972.15	ENST00000473123.5	1242	3	5282	-243	5282	123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGTTTGACGGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	91266119	91269134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_91266387_91268587
ENSMUSG00000036977.9_80438075_80455807_1	chr8	+	551	4	ISM	ENSMUSG00000036977.9	ENST00000613466.4	1097	5	13	46214	13	-46214	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAAAGCTACACTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	80438074	80455807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_80438359_80439781_80439909_80446286_80446378_80455758
ENSMUSG00000036977.9_80438194_80501599_1	chr8	+	543	5	FSM	ENSMUSG00000036977.9	ENST00000613466.4	1097	5	132	422	132	-422	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTTAACTGACAATCATAA	NA	NA	NA	NA	NA	NA	NA	NA	80438193	80501599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_80438359_80439781_80439909_80446286_80446378_80455758_80455880_80501560
ENSMUSG00000036977.9_80438271_80501633_1	chr8	+	500	5	FSM	ENSMUSG00000036977.9	ENST00000613466.4	1097	5	209	388	-178	-388	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCATGATACAGATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	80438270	80501633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_80438359_80439781_80439909_80446286_80446378_80455758_80455880_80501560
ENSMUSG00000036977.9_80438317_80501699_1	chr8	+	520	5	FSM	ENSMUSG00000036977.9	ENST00000613466.4	1097	5	255	322	-132	-322	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGATATACACACCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	80438316	80501699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_80438359_80439781_80439909_80446286_80446378_80455758_80455880_80501560
ENSMUSG00000036977.9_80438480_80504273_1	chr8	+	3176	5	FSM	ENSMUSG00000036977.9	ENSMUST00000210812.2	4591	5	0	1415	0	324	multi-exon	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCTACCAAATGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	80438479	80504273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_80438604_80439781_80439909_80446286_80446378_80455758_80455880_80501560
ENSMUSG00000036977.9_80438480_80504327_1	chr8	+	3230	5	FSM	ENSMUSG00000036977.9	ENSMUST00000210812.2	4591	5	0	1361	0	378	multi-exon	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTATGATCGTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	80438479	80504327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_80438604_80439781_80439909_80446286_80446378_80455758_80455880_80501560
ENSMUSG00000036980.14_138176879_138182810_1	chr5	-	2242	14	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	2657	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	NA	NA	NA	NA	NA	NA	NA	NA	138182810	138176878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182106_138182188_138182593
ENSMUSG00000036980.14_138176879_138182810_2	chr5	-	2243	14	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	2657	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	NA	NA	NA	NA	NA	NA	NA	NA	138182810	138176878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179270_138179375_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593
ENSMUSG00000036980.14_138176879_138182810_3	chr5	-	2242	14	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	2657	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	NA	NA	NA	NA	NA	NA	NA	NA	138182810	138176878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181000_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593
ENSMUSG00000036980.14_138176879_138185478_1	chr5	-	2273	15	FSM	ENSMUSG00000036980.14	ENST00000452041.5	2276	15	7	-4	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	NA	NA	NA	NA	NA	NA	NA	NA	138185478	138176878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185452
ENSMUSG00000036980.14_138178042_138185478_1	chr5	-	1565	13	ISM	ENSMUSG00000036980.14	ENSMUST00000110937.8	2093	15	-11	1160	7	-1158	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGCTGCTGAGGGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	138185478	138178041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ENSMUSG00000036980.14_138180539_138185103_1	chr5	-	951	9	ISM	ENSMUSG00000036980.14	ENST00000344095.8	2676	15	367	3655	364	-3655	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCTTGCTTATCTACC	NA	NA	NA	NA	NA	NA	NA	NA	138185103	138180538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185036
ENSMUSG00000036980.14_138180937_138185257_1	chr5	-	924	7	ISM	ENSMUSG00000036980.14	ENST00000344095.8	2676	15	213	4053	210	-4053	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTCTGTGGAGCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	138185257	138180936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185036
ENSMUSG00000036980.14_138180937_138185300_1	chr5	-	967	7	ISM	ENSMUSG00000036980.14	ENST00000344095.8	2676	15	170	4053	167	-4053	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTCTGTGGAGCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	138185300	138180936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185036
ENSMUSG00000036980.14_138181397_138185467_1	chr5	-	1025	6	ISM	ENSMUSG00000036980.14	ENST00000344095.8	2676	15	3	4513	0	-4513	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCAAAGGTCAAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	138185467	138181396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185036
ENSMUSG00000036980.14_138181457_138185467_1	chr5	-	965	6	ISM	ENSMUSG00000036980.14	ENST00000344095.8	2676	15	3	4573	0	-4573	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGCCACAGAACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	138185467	138181456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185036
ENSMUSG00000036983.8_3568364_3572051_1	chr17	-	1660	3	ISM	ENSMUSG00000036983.8	ENST00000367166.5	2324	8	35939	0	35939	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCCACATGACACGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	3572051	3568363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_3569264_3569442_3570071_3571919
ENSMUSG00000036983.8_3568480_3586448_1	chr17	-	1636	4	ISM	ENSMUSG00000036983.8	ENST00000367166.5	2324	8	21542	116	21542	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATCTGAGTCCAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	3586448	3568479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_3569264_3569442_3570071_3571919_3572048_3586352
ENSMUSG00000036983.8_3568604_3593426_1	chr17	-	1591	5	ISM	ENSMUSG00000036983.8	ENST00000367166.5	2324	8	14564	240	14564	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGACCATCTGGAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	3593426	3568603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_3569264_3569442_3570071_3571919_3572048_3586352_3586473_3593371
ENSMUSG00000036983.8_3568710_3595895_1	chr17	-	1620	6	ISM	ENSMUSG00000036983.8	ENST00000367166.5	2324	8	12095	346	12095	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTCAGTCTCTGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	3595895	3568709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_3569264_3569442_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857
ENSMUSG00000036983.8_3568829_3605243_1	chr17	-	1609	7	ISM	ENSMUSG00000036983.8	ENST00000367166.5	2324	8	2747	465	2747	-465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTGTTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	3605243	3568828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_3569264_3569442_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206
ENSMUSG00000036983.8_3568948_3607882_1	chr17	-	1632	8	FSM	ENSMUSG00000036983.8	ENST00000367166.5	2324	8	108	584	108	583	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTCTGGACACTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	3607882	3568947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_3569264_3569442_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
ENSMUSG00000036983.8_3569016_3608009_1	chr17	-	1691	8	FSM	ENSMUSG00000036983.8	ENST00000367166.5	2324	8	-19	652	-19	515	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTACACAAATCATGATT	NA	NA	NA	NA	NA	NA	NA	NA	3608009	3569015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_3569264_3569442_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
ENSMUSG00000036983.8_3569060_3608009_1	chr17	-	1647	8	FSM	ENSMUSG00000036983.8	ENST00000367166.5	2324	8	-19	696	-19	471	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCTTTTCCACCAATT	NA	NA	NA	NA	NA	NA	NA	NA	3608009	3569059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_3569264_3569442_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
ENSMUSG00000036986.17_58127143_58154707_1	chr9	-	2272	6	FSM	ENSMUSG00000036986.17	ENST00000565898.5	2275	6	4	-1	4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCATGCCCCTGCTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	58154707	58127142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137406_58141603_58142217_58154257
ENSMUSG00000036986.17_58136630_58154429_1	chr9	-	909	4	FSM	ENSMUSG00000036986.17	ENST00000567543.5	1189	4	282	-2	282	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGACTTCAGCCTAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	58154429	58136629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_58136691_58140435_58140531_58141635_58142217_58154257
ENSMUSG00000036986.17_58136630_58154562_1	chr9	-	1042	4	FSM	ENSMUSG00000036986.17	ENST00000567543.5	1189	4	149	-2	149	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGACTTCAGCCTAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	58154562	58136629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_58136691_58140435_58140531_58141635_58142217_58154257
ENSMUSG00000036986.17_58136662_58141749_1	chr9	-	470	3	ISM	ENSMUSG00000036986.17	ENST00000354026.10	1390	4	12962	-1	12962	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGATTCGGACACCGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	58141749	58136661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58136691_58137110_58137406_58141603
ENSMUSG00000036986.17_58137131_58141892_1	chr9	-	564	2	ISM	ENSMUSG00000036986.17	ENST00000354026.10	1390	4	12819	468	12819	-468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGACACAGGGGAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	58141892	58137130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58137406_58141603
ENSMUSG00000036986.17_58141636_58154707_1	chr9	-	1031	2	ISM	ENSMUSG00000036986.17	ENST00000354026.10	1390	4	4	4973	4	-4973	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGTTGAGGCCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	58154707	58141635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_58142217_58154257
ENSMUSG00000036992.11_148514546_148517499_1	chr2	+	643	3	FSM	ENSMUSG00000036992.11	ENSMUST00000109961.8	1116	3	25	448	0	-448	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGATGACGCTACACCAA	NA	NA	NA	NA	NA	NA	NA	NA	148514545	148517499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_148514756_148516383_148516519_148517201
ENSMUSG00000036992.11_148514546_148517499_2	chr2	+	508	2	FSM	ENSMUSG00000036992.11	ENSMUST00000047177.4	956	2	0	448	0	-448	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGATGACGCTACACCAA	NA	NA	NA	NA	NA	NA	NA	NA	148514545	148517499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_148514756_148517201
ENSMUSG00000037003.17_102011544_102019684_1	chr15	+	1551	18	ISM	ENSMUSG00000037003.17	ENST00000549700.5	4412	30	22	5151	22	-5142	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATCCCCCGGCCGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	102011543	102019684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102011597_102012964_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516
ENSMUSG00000037003.17_102015550_102020104_1	chr15	+	1543	12	ISM	ENSMUSG00000037003.17	ENSMUST00000230474.2	4637	28	2690	4731	2690	-4722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGCTACCGTCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	102015549	102020104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516
ENSMUSG00000037003.17_102015598_102020169_1	chr15	+	1560	12	ISM	ENSMUSG00000037003.17	ENSMUST00000230474.2	4637	28	2738	4666	2738	-4657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTCATGCCCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	102015597	102020169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516
ENSMUSG00000037003.17_102016253_102020305_1	chr15	+	1605	10	ISM	ENSMUSG00000037003.17	ENSMUST00000230474.2	4637	28	3393	4530	3393	-4521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACCCATTGCCTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	102016252	102020305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516
ENSMUSG00000037003.17_102016340_102020346_1	chr15	+	1559	10	ISM	ENSMUSG00000037003.17	ENSMUST00000230474.2	4637	28	3480	4489	3480	-4480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCCCAATGCCTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	102016339	102020346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516
ENSMUSG00000037003.17_102017339_102020661_1	chr15	+	1545	9	ISM	ENSMUSG00000037003.17	ENST00000549700.5	4412	30	5817	4174	4479	-4165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGATGGGAGAGACAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	102017338	102020661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020442_102020636
ENSMUSG00000037003.17_102017827_102020903_1	chr15	+	1546	9	ISM	ENSMUSG00000037003.17	ENST00000549700.5	4412	30	6305	3932	4967	-3923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCACGCTACCTCGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	102017826	102020903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020442_102020636_102020729_102020863
ENSMUSG00000037003.17_102017945_102021011_1	chr15	+	1615	8	ISM	ENSMUSG00000037003.17	ENST00000549700.5	4412	30	6423	3824	5085	-3815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACAGAGGGCCAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	102017944	102021011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020442_102020636_102020729_102020863
ENSMUSG00000037003.17_102018905_102021138_1	chr15	+	1513	7	ISM	ENSMUSG00000037003.17	ENST00000549700.5	4412	30	7383	3697	6045	-3688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCCACTCAGAGACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	102018904	102021138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102019036_102019113_102019180_102019305_102019420_102019516_102020442_102020636_102020729_102020863_102021012_102021101
ENSMUSG00000037003.17_102018931_102021222_1	chr15	+	1571	7	ISM	ENSMUSG00000037003.17	ENST00000549700.5	4412	30	7409	3613	6071	-3604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCAGGCCTGAGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	102018930	102021222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102019036_102019113_102019180_102019305_102019420_102019516_102020442_102020636_102020729_102020863_102021012_102021101
ENSMUSG00000037003.17_102018991_102021266_1	chr15	+	1555	7	ISM	ENSMUSG00000037003.17	ENST00000549700.5	4412	30	7469	3569	6131	-3560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCACCCGGCTCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	102018990	102021266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102019036_102019113_102019180_102019305_102019420_102019516_102020442_102020636_102020729_102020863_102021012_102021101
ENSMUSG00000037003.17_102019391_102021456_1	chr15	+	1549	5	ISM	ENSMUSG00000037003.17	ENST00000549700.5	4412	30	7869	3379	6531	-3370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGTGGGCAGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	102019390	102021456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102019420_102019516_102020442_102020636_102020729_102020863_102021012_102021101
ENSMUSG00000037003.17_102019692_102021790_1	chr15	+	1576	5	ISM	ENSMUSG00000037003.17	ENST00000549700.5	4412	30	8170	3045	6832	-3036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGCAATGTCAAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	102019691	102021790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102020442_102020636_102020729_102020863_102021012_102021101_102021668_102021770
ENSMUSG00000037003.17_102019837_102022160_1	chr15	+	1517	6	ISM	ENSMUSG00000037003.17	ENST00000549700.5	4412	30	8315	2675	6977	-2666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGGATCCTGGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	102019836	102022160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102020442_102020636_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144
ENSMUSG00000037003.17_102020213_102023471_1	chr15	+	1547	10	ISM	ENSMUSG00000037003.17	ENST00000549700.5	4412	30	8691	1364	7353	-1355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTCAGGCTGTGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	102020212	102023471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102020442_102020636_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424
ENSMUSG00000037003.17_102020253_102023537_1	chr15	+	1573	10	ISM	ENSMUSG00000037003.17	ENST00000549700.5	4412	30	8731	1298	7393	-1289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCCATTTCAAGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	102020252	102023537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102020442_102020636_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424
ENSMUSG00000037003.17_102020383_102024043_1	chr15	+	1547	11	ISM	ENSMUSG00000037003.17	ENST00000549700.5	4412	30	8861	792	7523	-783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACCCCCAGGACCGCA	NA	NA	NA	NA	NA	NA	NA	NA	102020382	102024043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102020442_102020636_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995
ENSMUSG00000037003.17_102020687_102024431_1	chr15	+	1628	12	ISM	ENSMUSG00000037003.17	ENSMUST00000230474.2	4637	28	7827	404	7827	-395	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAGCCACAAGCTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	102020686	102024431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
ENSMUSG00000037003.17_102021398_102024827_1	chr15	+	1538	10	ISM	ENSMUSG00000037003.17	ENSMUST00000230474.2	4637	28	8538	8	8538	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTTTTGAGGAGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	102021397	102024827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
ENSMUSG00000037007.18_138143124_138143574_1	chr5	-	360	2	NNC	ENSMUSG00000037007.18	novel	365	2	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTTTACCTACAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	138143574	138143123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_138143359_138143449
ENSMUSG00000037007.18_138143124_138143574_2	chr5	-	366	2	FSM	ENSMUSG00000037007.18	ENST00000250076.7	365	2	0	-1	0	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTTTACCTACAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	138143574	138143123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_138143365_138143449
ENSMUSG00000037007.18_138143406_138148914_1	chr5	-	615	2	ISM	ENSMUSG00000037007.18	ENSMUST00000165640.8	1320	4	2247	477	2247	-281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGCCTTATGAATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	138148914	138143405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138143975_138148868
ENSMUSG00000037007.18_138143519_138149481_1	chr5	-	598	3	ISM	ENSMUSG00000037007.18	ENSMUST00000165640.8	1320	4	1680	590	1680	-394	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTCAGCACCAGAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	138149481	138143518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138143975_138148868_138148996_138149466
ENSMUSG00000037007.18_138143664_138153966_1	chr5	-	605	4	FSM	ENSMUSG00000037007.18	ENST00000412947.6	1449	4	26	818	0	-539	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGGAGACAAACCCCATAA	NA	NA	NA	NA	NA	NA	NA	NA	138153966	138143663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_138143975_138148868_138148996_138149466_138149559_138153891
ENSMUSG00000037012.19_62104634_62128204_1	chr10	-	2892	11	ISM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	48117	0	48117	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGGTTCAGACAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	62128204	62104633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092
ENSMUSG00000037012.19_62104887_62131800_1	chr10	-	2893	13	ISM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	44521	253	44521	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCGGAGTGGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	62131800	62104886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774
ENSMUSG00000037012.19_62105159_62134952_1	chr10	-	2815	15	ISM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	41369	525	41369	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGCCATCCCATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	62134952	62105158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928
ENSMUSG00000037012.19_62105202_62135020_1	chr10	-	2840	15	ISM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	41301	568	41301	-315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGGCACTGCTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	62135020	62105201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928
ENSMUSG00000037012.19_62105307_62140565_1	chr10	-	2830	16	ISM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	35756	673	35756	381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGAGTCGCCTCCCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	62140565	62105306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498
ENSMUSG00000037012.19_62105348_62140636_1	chr10	-	2860	16	ISM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	35685	714	35685	340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCTTGGACTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	62140636	62105347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498
ENSMUSG00000037012.19_62105469_62151229_1	chr10	-	2815	17	ISM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	25092	835	25092	219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCCTCATCCCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	62151229	62105468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164
ENSMUSG00000037012.19_62105522_62151289_1	chr10	-	2822	17	ISM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	25032	888	25032	166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATAGAATACCACCCGG	NA	NA	NA	NA	NA	NA	NA	NA	62151289	62105521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164
ENSMUSG00000037012.19_62105688_62175907_1	chr10	-	2810	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	414	1054	414	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGGATCCTCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	62175907	62105687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ENSMUSG00000037012.19_62105688_62175943_1	chr10	-	2846	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	378	1054	378	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGGATCCTCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	62175943	62105687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ENSMUSG00000037012.19_62105688_62175993_1	chr10	-	2896	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	328	1054	328	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGGATCCTCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	62175993	62105687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ENSMUSG00000037012.19_62107421_62176108_1	chr10	-	2810	17	ISM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	213	2787	213	-1733	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGAATGTAACCGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	62176108	62107420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ENSMUSG00000037012.19_62107495_62176185_1	chr10	-	2813	17	ISM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	136	2861	136	-1807	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGGCGGCCCAGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	62176185	62107494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ENSMUSG00000037012.19_62107551_62176321_1	chr10	-	2893	17	ISM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	0	2917	0	-1863	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGCACGTGCGACGACA	NA	NA	NA	NA	NA	NA	NA	NA	62176321	62107550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ENSMUSG00000037013.18_14758712_14769675_1	chr18	-	1914	3	ISM	ENSMUSG00000037013.18	ENSMUST00000234524.2	2603	9	46148	0	46148	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATAAATTATTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	14769675	14758711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_14760369_14766599_14766734_14769552
ENSMUSG00000037013.18_14758845_14773418_1	chr18	-	1886	4	ISM	ENSMUSG00000037013.18	ENSMUST00000234524.2	2603	9	42405	133	42405	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAATAGGCATCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	14773418	14758844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313
ENSMUSG00000037013.18_14758997_14774180_1	chr18	-	1902	5	ISM	ENSMUSG00000037013.18	ENSMUST00000234524.2	2603	9	41643	285	41643	-285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTGAAAACAGAACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	14774180	14758996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012
ENSMUSG00000037013.18_14759120_14784184_1	chr18	-	1884	6	ISM	ENSMUSG00000037013.18	ENSMUST00000092041.11	2911	10	31701	432	31639	-408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGCATACTTTAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	14784184	14759119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079
ENSMUSG00000037013.18_14759295_14788111_1	chr18	-	1854	7	ISM	ENSMUSG00000037013.18	ENSMUST00000092041.11	2911	10	27774	607	27712	-583	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTGATGGCCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	14788111	14759294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083
ENSMUSG00000037013.18_14759344_14788183_1	chr18	-	1877	7	ISM	ENSMUSG00000037013.18	ENSMUST00000092041.11	2911	10	27702	656	27640	-632	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGCGCCTTCGTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	14788183	14759343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083
ENSMUSG00000037013.18_14759624_14815813_1	chr18	-	1903	10	FSM	ENSMUSG00000037013.18	ENSMUST00000092041.11	2911	10	72	936	10	-912	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTTCAAACGCAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	14815813	14759623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ENSMUSG00000037013.18_14759662_14815848_1	chr18	-	1900	10	FSM	ENSMUSG00000037013.18	ENSMUST00000092041.11	2911	10	37	974	-25	-950	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATTAAAACCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	14815848	14759661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ENSMUSG00000037020.17_29964507_29973436_1	chr7	-	950	7	ISM	ENSMUSG00000037020.17	ENST00000680321.1	1219	9	6322	0	6322	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGACTGCTTTCCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	29973436	29964506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29964682_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372
ENSMUSG00000037020.17_29964645_29974619_1	chr7	-	904	8	ISM	ENSMUSG00000037020.17	ENST00000680321.1	1219	9	5139	138	5139	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGACCCCGTCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	29974619	29964644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29964682_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526
ENSMUSG00000037020.17_29967207_29979615_1	chr7	-	901	8	ISM	ENSMUSG00000037020.17	ENST00000680321.1	1219	9	143	2700	143	-2700	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTCCTACACTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	29979615	29967206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ENSMUSG00000037020.17_29967264_29979676_1	chr7	-	905	8	ISM	ENSMUSG00000037020.17	ENST00000680321.1	1219	9	82	2757	82	-2757	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTGCCCAAACCACACT	NA	NA	NA	NA	NA	NA	NA	NA	29979676	29967263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ENSMUSG00000037031.11_62022013_62025640_1	chr10	-	2094	3	ISM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	41390	838	41390	-838	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACCCGAGTTTCTATAT	NA	NA	NA	NA	NA	NA	NA	NA	62025640	62022012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62023942_62024421_62024539_62025592
ENSMUSG00000037031.11_62022189_62029670_1	chr10	-	2056	5	NNC	ENSMUSG00000037031.11	novel	3638	8	NA	NA	37360	-1014	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGCCCCTTTGATCAGG	NA	NA	NA	NA	NA	NA	NA	NA	62029670	62022188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_62023942_62024421_62024539_62025592_62025637_62027246_62027364_62029645
ENSMUSG00000037031.11_62022342_62029741_1	chr10	-	1974	5	NNC	ENSMUSG00000037031.11	novel	3638	8	NA	NA	37289	-1167	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGCTGGCCTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	62029741	62022341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_62023942_62024421_62024539_62025592_62025637_62027246_62027364_62029645
ENSMUSG00000037031.11_62022363_62037631_1	chr10	-	2032	6	ISM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	29399	1188	29399	-1188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACGGGGTCTCACGT	NA	NA	NA	NA	NA	NA	NA	NA	62037631	62022362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556
ENSMUSG00000037031.11_62022711_62067030_1	chr10	-	2102	8	FSM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	0	1536	0	-1536	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTTAGGGAATTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	62067030	62022710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
ENSMUSG00000037032.17_105208368_105216907_1	chr7	-	1156	11	ISM	ENSMUSG00000037032.17	ENSMUST00000187057.7	1630	13	1077	343	1077	-343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGAGGCTGTGCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	105216907	105208367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784
ENSMUSG00000037032.17_105216914_105223609_1	chr7	-	768	2	ISM	ENSMUSG00000037032.17	ENSMUST00000081165.14	2530	13	0	9221	0	-8889	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGATGGATGAGGGTACA	NA	NA	NA	NA	NA	NA	NA	NA	105223609	105216913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105216961_105222888
ENSMUSG00000037032.17_105222963_105230395_1	chr7	-	715	2	ISM	ENSMUSG00000037032.17	ENSMUST00000191601.7	2690	15	90	15272	90	-14938	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAGTGATGAGGACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	105230395	105222962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105223624_105230341
ENSMUSG00000037032.17_105223011_105230485_1	chr7	-	757	2	ISM	ENSMUSG00000037032.17	ENSMUST00000191601.7	2690	15	0	15320	0	-14986	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACACAGCAAGAGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	105230485	105223010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_105223624_105230341
ENSMUSG00000037035.6_119344926_119349570_1	chr1	-	2116	2	FSM	ENSMUSG00000037035.6	ENSMUST00000038765.6	4255	2	408	1731	408	-1731	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCTTTGTAGAAAACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	119349570	119344925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_119345828_119348356
ENSMUSG00000037049.10_105203885_105204466_1	chr7	+	198	2	ISM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	318	3130	318	-3130	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGATATGCAAGATGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	105203884	105204466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105204045_105204428
ENSMUSG00000037049.10_105203999_105204561_1	chr7	+	179	2	ISM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	432	3035	432	-3035	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTCTGAGCCCATCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	105203998	105204561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105204045_105204428
ENSMUSG00000037049.10_105205138_105205816_1	chr7	+	167	2	ISM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	1571	1780	1571	-1780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATCCTGCTGGACAACT	NA	NA	NA	NA	NA	NA	NA	NA	105205137	105205816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105205202_105205713
ENSMUSG00000037049.10_105206643_105206944_1	chr7	+	174	2	ISM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	3076	652	3076	-652	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAAGCGCCTCTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	105206642	105206944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105206703_105206830
ENSMUSG00000037053.7_137979830_137983572_1	chr5	+	242	2	FSM	ENSMUSG00000037053.7	ENST00000454506.2	321	2	9	70	9	-70	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTCAGAGGGCCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	137979829	137983572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_137979887_137983387
ENSMUSG00000037058.17_35731694_35749447_1	chr18	+	659	4	FSM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	24	792	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAATAAAAGTGCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	35731693	35749447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_35731813_35743923_35744088_35746375_35746556_35749251
ENSMUSG00000037058.17_35743923_35749574_1	chr18	+	668	3	ISM	ENSMUSG00000037058.17	ENSMUST00000236414.2	718	4	10805	-2	10805	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAATTAAATCACCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	35743922	35749574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35744088_35746375_35746556_35749251
ENSMUSG00000037058.17_35746407_35749738_1	chr18	+	636	2	ISM	ENSMUSG00000037058.17	ENSMUST00000236414.2	718	4	13289	-166	13289	166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTCTGGAGAAAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	35746406	35749738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35746556_35749251
ENSMUSG00000037060.4_105129290_105131366_1	chr7	-	1521	2	FSM	ENSMUSG00000037060.4	ENSMUST00000047040.4	1662	2	141	0	141	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTTTAGATCTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	105131366	105129289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_105130427_105130982
ENSMUSG00000037060.4_105129290_105131366_2	chr7	-	1518	2	NNC	ENSMUSG00000037060.4	novel	1662	2	NA	NA	141	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTTTAGATCTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	105131366	105129289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_105130424_105130982
ENSMUSG00000037062.14_144390459_144397295_1	chr3	-	519	2	ISM	ENSMUSG00000037062.14	ENSMUST00000199531.5	2584	10	28576	1020	28576	-1020	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAGTAATTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	144397295	144390458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_144390901_144397218
ENSMUSG00000037062.14_144390656_144397889_1	chr3	-	549	3	ISM	ENSMUSG00000037062.14	ENSMUST00000199531.5	2584	10	27982	1217	27982	-1217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATAAATAGTTACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	144397889	144390655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_144390901_144397218_144397294_144397660
ENSMUSG00000037062.14_144394605_144402715_1	chr3	-	3019	3	ISM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	23381	0	23156	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	144402715	144394604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_144397294_144397660_144397890_144402614
ENSMUSG00000037062.14_144394840_144411366_1	chr3	-	2967	5	ISM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	14730	235	14505	-235	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAAACCCATTAATTCG	NA	NA	NA	NA	NA	NA	NA	NA	144411366	144394839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273
ENSMUSG00000037062.14_144394992_144412453_1	chr3	-	2910	6	ISM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	13643	387	13418	-387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCCTGCTCTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	144412453	144394991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358
ENSMUSG00000037062.14_144395279_144418489_1	chr3	-	2933	8	ISM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	7607	674	7382	-674	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGCCCCCTTCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	144418489	144395278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347
ENSMUSG00000037062.14_144395499_144425871_1	chr3	-	2842	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	225	894	0	-894	multi-exon	FALSE	canonical	NA	NA	NA	NA	4187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGCTCCCTGGAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	144425871	144395498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
ENSMUSG00000037062.14_144397219_144425871_1	chr3	-	980	8	FSM	ENSMUSG00000037062.14	ENST00000535010.5	1523	8	103	440	0	-112	multi-exon	FALSE	canonical	NA	NA	NA	NA	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCAATTACCTACTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	144425871	144397218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144425742
ENSMUSG00000037070.11_79232879_79235508_1	chr8	-	649	2	FSM	ENSMUSG00000037070.11	ENSMUST00000211719.2	1622	2	0	973	0	-973	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTCCCCCTCCTAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	79235508	79232878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_79233447_79235427
ENSMUSG00000037070.11_79232948_79235508_1	chr8	-	626	2	FSM	ENSMUSG00000037070.11	ENSMUST00000049245.10	1695	2	19	1050	0	-1042	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGAACTTTAACATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	79235508	79232947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_79233493_79235427
ENSMUSG00000037071.4_44382894_44395129_1	chr19	-	4438	5	ISM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	1019	0	1019	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	44395129	44382893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925
ENSMUSG00000037071.4_44382894_44395199_1	chr19	-	4508	5	ISM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	949	0	949	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	44395199	44382893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925
ENSMUSG00000037071.4_44383016_44395938_2	chr19	-	4500	6	FSM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	210	122	210	-122	multi-exon	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTAATTATTTGTGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	44395938	44383015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
ENSMUSG00000037072.17_144276187_144303018_1	chr3	+	1091	5	FSM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	0	423	0	212	multi-exon	FALSE	canonical	NA	NA	NA	NA	2076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATAGAGGAAGTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	144276186	144303018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300712_144302583
ENSMUSG00000037072.17_144276290_144303080_1	chr3	+	1050	5	FSM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	103	361	103	274	multi-exon	FALSE	canonical	NA	NA	NA	NA	2500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAAAACTACAAACACGT	NA	NA	NA	NA	NA	NA	NA	NA	144276289	144303080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300712_144302583
ENSMUSG00000037072.17_144276475_144303253_1	chr3	+	1038	5	FSM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	288	188	21	-169	multi-exon	FALSE	canonical	NA	NA	NA	NA	2712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATACTTATAAAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	144276474	144303253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300712_144302583
ENSMUSG00000037072.17_144283413_144302806_2	chr3	+	469	4	FSM	ENSMUSG00000037072.17	ENST00000401030.4	533	4	64	0	64	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTACATCATTAATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	144283412	144302806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_144283545_144296372_144296437_144300661_144300712_144302583
ENSMUSG00000037072.17_144283413_144303441_1	chr3	+	1074	4	ISM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	7226	0	64	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCTTTGTCCTTTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	144283412	144303441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_144283515_144296372_144296437_144300661_144300712_144302583
ENSMUSG00000037075.8_58761147_58771109_1	chr15	+	1149	2	FSM	ENSMUSG00000037075.8	ENSMUST00000036904.7	4348	2	69	3130	69	-3130	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCCTCCCATGTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	58761146	58771109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_58761344_58770157
ENSMUSG00000037089.12_45874800_45877973_1	chr17	+	1283	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	0	623	0	-198	multi-exon	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTATCATCATGACTCTA	NA	NA	NA	NA	NA	NA	NA	NA	45874799	45877973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
ENSMUSG00000037089.12_45874800_45877973_2	chr17	+	1128	3	FSM	ENSMUSG00000037089.12	ENST00000538577.5	1303	3	-23	198	0	-198	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTATCATCATGACTCTA	NA	NA	NA	NA	NA	NA	NA	NA	45874799	45877973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_45874995_45875505_45875700_45877234
ENSMUSG00000037089.12_45874950_45877973_1	chr17	+	1133	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	150	623	60	-198	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTATCATCATGACTCTA	NA	NA	NA	NA	NA	NA	NA	NA	45874949	45877973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
ENSMUSG00000037089.12_45874950_45878093_1	chr17	+	1098	3	FSM	ENSMUSG00000037089.12	ENST00000538577.5	1303	3	127	78	60	-78	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGTCTATGCCCGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	45874949	45878093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_45874995_45875505_45875700_45877234
ENSMUSG00000037089.12_45874950_45878093_2	chr17	+	1253	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	150	503	60	-78	multi-exon	FALSE	canonical	NA	NA	NA	NA	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGTCTATGCCCGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	45874949	45878093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
ENSMUSG00000037089.12_45875503_45876765_1	chr17	+	528	3	ISM	ENSMUSG00000037089.12	ENSMUST00000226086.2	850	4	617	216	372	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGGTGACAGCGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	45875502	45876765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_45875700_45875850_45876006_45876589
ENSMUSG00000037089.12_45875892_45878326_1	chr17	+	1206	2	ISM	ENSMUSG00000037089.12	ENSMUST00000223987.2	1766	4	761	271	761	155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAATCTCTGAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	45875891	45878326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_45876006_45877234
ENSMUSG00000037101.17_78972805_79060234_1	chr8	+	895	7	NNC	ENSMUSG00000037101.17	novel	1161	8	NA	NA	73	-6387	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGCTCATGAAAACGGCG	NA	NA	NA	NA	NA	NA	NA	NA	78972804	79060234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_78972952_78978351_78978538_79003371_79003585_79008930_79009017_79042301_79042394_79052102_79052222_79060182
ENSMUSG00000037101.17_78972811_79060238_1	chr8	+	898	7	ISM	ENSMUSG00000037101.17	ENST00000504425.5	1161	8	79	6383	79	-6383	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCATGAAAACGGCGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	78972810	79060238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_78972952_78978351_78978538_79003371_79003585_79008930_79009017_79042301_79042394_79052097_79052222_79060182
ENSMUSG00000037101.17_78972846_79060307_1	chr8	+	927	7	NNC	ENSMUSG00000037101.17	novel	1161	8	NA	NA	114	-6314	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGCGATGAAGGGTTACA	NA	NA	NA	NA	NA	NA	NA	NA	78972845	79060307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_78972952_78978351_78978538_79003371_79003585_79008930_79009017_79042301_79042394_79052102_79052222_79060182
ENSMUSG00000037101.17_78972863_79060293_1	chr8	+	901	7	ISM	ENSMUSG00000037101.17	ENST00000504425.5	1161	8	131	6328	131	-6328	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCACCAGATGATGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	78972862	79060293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_78972952_78978351_78978538_79003371_79003585_79008930_79009017_79042301_79042394_79052097_79052222_79060182
ENSMUSG00000037101.17_78972914_79060343_1	chr8	+	900	7	ISM	ENSMUSG00000037101.17	ENST00000504425.5	1161	8	182	6278	182	-6278	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCCTCAACTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	78972913	79060343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_78972952_78978351_78978538_79003371_79003585_79008930_79009017_79042301_79042394_79052097_79052222_79060182
ENSMUSG00000037103.9_84824062_84831392_1	chr8	-	1838	13	FSM	ENSMUSG00000037103.9	ENSMUST00000210279.2	2199	13	0	361	0	-361	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTCCAACTACCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	84831392	84824061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_84824138_84824365_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
ENSMUSG00000037108.14_137790123_137815786_1	chr5	+	1437	13	ISM	ENSMUSG00000037108.14	ENST00000360951.8	1800	15	0	4897	0	-4897	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAAGAGGGATGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	137790122	137815786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137790218_137793752_137793808_137794833_137795079_137796159_137796236_137797742_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719
ENSMUSG00000037108.14_137790123_137820683_1	chr5	+	1495	12	FSM	ENSMUSG00000037108.14	ENST00000684423.1	1495	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGGCAGCTCAGAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	137790122	137820683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_137790218_137793752_137793808_137794833_137795079_137796159_137796236_137797742_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810304_137820415
ENSMUSG00000037108.14_137793753_137816154_1	chr5	+	1437	13	ISM	ENSMUSG00000037108.14	ENST00000360951.8	1800	15	3630	4529	3630	-4529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATCGTAGAGAGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	137793752	137816154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137793808_137794833_137795079_137796159_137796236_137797742_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059
ENSMUSG00000037108.14_137794832_137816154_1	chr5	+	1379	12	NNC	ENSMUSG00000037108.14	novel	1800	15	NA	NA	4709	-4529	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATCGTAGAGAGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	137794831	137816154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_137795079_137796164_137796236_137797742_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059
ENSMUSG00000037108.14_137794832_137816154_2	chr5	+	1381	12	NNC	ENSMUSG00000037108.14	novel	1800	15	NA	NA	4709	-4529	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATCGTAGAGAGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	137794831	137816154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_137795079_137796159_137796236_137797742_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815722_137815787_137816059
ENSMUSG00000037108.14_137795021_137820583_2	chr5	+	1363	13	ISM	ENSMUSG00000037108.14	ENST00000360951.8	1800	15	4898	100	4898	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAAGTTTCCCTCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	137795020	137820583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137795079_137796159_137796236_137797742_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137820415
ENSMUSG00000037108.14_137795021_137820683_1	chr5	+	1463	13	ISM	ENSMUSG00000037108.14	ENST00000360951.8	1800	15	4898	0	4898	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGGCAGCTCAGAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	137795020	137820683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137795079_137796159_137796236_137797742_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137820415
ENSMUSG00000037110.21_146175371_146184329_1	chr2	-	749	4	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	169601	73085	169490	-73085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCATCAGATTCAGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	146184329	146175370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146175492_146176411_146176536_146182298_146182371_146183897
ENSMUSG00000037110.21_146184157_146188656_1	chr2	-	725	3	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	165274	81871	165163	-81871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCTTTTACCATCACAA	NA	NA	NA	NA	NA	NA	NA	NA	146188656	146184156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146184670_146187305_146187490_146188628
ENSMUSG00000037110.21_146184600_146199056_1	chr2	-	730	7	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	154874	82314	154763	-82314	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGGCCACTATCCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	146199056	146184599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007
ENSMUSG00000037110.21_146190368_146229625_1	chr2	-	792	7	ISM	ENSMUSG00000037110.21	ENSMUST00000131824.8	5624	39	124194	100249	124194	-88082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCTTTATCTATACT	NA	NA	NA	NA	NA	NA	NA	NA	146229625	146190367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526
ENSMUSG00000037110.21_146195183_146230552_1	chr2	-	731	7	ISM	ENSMUSG00000037110.21	ENSMUST00000131824.8	5624	39	123267	105064	123267	-92897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGGGGTCTGGATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	146230552	146195182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410
ENSMUSG00000037110.21_146229206_146252153_1	chr2	-	720	6	ISM	ENSMUSG00000037110.21	ENSMUST00000131824.8	5624	39	101666	139087	101666	-126920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTCCTGGTGCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	146252153	146229205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092
ENSMUSG00000037110.21_146229534_146254796_1	chr2	-	795	6	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	99134	127248	99023	-127248	internal_fragment	TRUE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGGCAAGTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	146254796	146229533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146254653
ENSMUSG00000037110.21_146230492_146263667_1	chr2	-	769	6	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	90263	128206	90152	-128206	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGAATAACATCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	146263667	146230491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146254653_146254789_146263512
ENSMUSG00000037110.21_146246755_146266651_1	chr2	-	809	6	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	87279	144469	87168	-144469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGAGGAGACCCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	146266651	146246754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146246960_146248261_146248353_146252092_146252191_146254653_146254789_146263512_146263678_146266536
ENSMUSG00000037110.21_146246888_146266705_1	chr2	-	730	6	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	87225	144602	87114	-144602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGAGGAGGACCCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	146266705	146246887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146246960_146248261_146248353_146252092_146252191_146254653_146254789_146263512_146263678_146266536
ENSMUSG00000037110.21_146252093_146270636_1	chr2	-	748	5	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	83294	149807	83183	-149807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGATTTCTAAGAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	146270636	146252092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146252191_146254653_146254789_146263512_146263678_146266536_146266775_146270524
ENSMUSG00000037110.21_146254688_146273852_1	chr2	-	731	5	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	80078	152402	79967	-152402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGAGCGCTTGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	146273852	146254687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737
ENSMUSG00000037110.21_146254754_146273886_1	chr2	-	699	5	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	80044	152468	79933	-152468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCGACTGTGACTATCT	NA	NA	NA	NA	NA	NA	NA	NA	146273886	146254753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737
ENSMUSG00000037110.21_146263643_146277816_1	chr2	-	730	6	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	76114	161357	76003	-161357	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGATCCTTTTCTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	146277816	146263642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758
ENSMUSG00000037110.21_146266761_146285873_1	chr2	-	751	6	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	68057	164475	67946	-164475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATCCGAGCAAACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	146285873	146266760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703
ENSMUSG00000037110.21_146276718_146291149_1	chr2	-	736	5	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	62781	174432	62670	-174432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAAGCTATGTTGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	146291149	146276717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129
ENSMUSG00000037110.21_146276775_146291198_1	chr2	-	728	5	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	62732	174489	62621	-174489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCCATGAGCAGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	146291198	146276774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129
ENSMUSG00000037110.21_146285858_146295349_1	chr2	-	728	6	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	58581	183572	58470	-183572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCTAACAGCAGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	146295349	146285857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328
ENSMUSG00000037110.21_146291130_146353819_1	chr2	-	805	8	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	111	188844	0	-188844	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTGTCTGATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	146353819	146291129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ENSMUSG00000037110.21_146292371_146353924_1	chr2	-	772	7	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	6	190085	0	-190085	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAAAATCATAGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	146353924	146292370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ENSMUSG00000037129.8_45239759_45244882_1	chr9	+	594	4	ISM	ENSMUSG00000037129.8	ENST00000526090.1	1449	9	19	6500	19	-6500	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGGTCTTCTGGCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	45239758	45244882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_45240088_45241162_45241268_45243764_45243888_45244845
ENSMUSG00000037129.8_45239820_45244938_1	chr9	+	589	4	ISM	ENSMUSG00000037129.8	ENST00000526090.1	1449	9	80	6444	80	-6444	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCAAGAGGACCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	45239819	45244938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_45240088_45241162_45241268_45243764_45243888_45244845
ENSMUSG00000037129.8_45239895_45244975_1	chr9	+	551	4	ISM	ENSMUSG00000037129.8	ENST00000526090.1	1449	9	155	6407	155	-6407	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAACAAAGAATTAATCGG	NA	NA	NA	NA	NA	NA	NA	NA	45239894	45244975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_45240088_45241162_45241268_45243764_45243888_45244845
ENSMUSG00000037129.8_45240043_45249604_1	chr9	+	591	7	ISM	ENSMUSG00000037129.8	ENST00000526090.1	1449	9	303	1778	303	-1778	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGAGCAAGTGGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	45240042	45249604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_45240088_45241162_45241268_45243764_45243888_45244845_45244976_45247391_45247485_45248343_45248388_45249553
ENSMUSG00000037129.8_45241161_45249716_1	chr9	+	660	6	ISM	ENSMUSG00000037129.8	ENST00000526090.1	1449	9	1421	1666	1421	-1666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGCCTGAGGGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	45241160	45249716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_45241268_45243764_45243888_45244845_45244976_45247391_45247485_45248343_45248388_45249553
ENSMUSG00000037129.8_45243758_45250571_1	chr9	+	599	6	ISM	ENSMUSG00000037129.8	ENST00000526090.1	1449	9	4018	811	4018	-811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCACCAGCAACTTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	45243757	45250571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_45243888_45244845_45244976_45247391_45247485_45248343_45248388_45249553_45249717_45250532
ENSMUSG00000037129.8_45243812_45250622_1	chr9	+	596	6	ISM	ENSMUSG00000037129.8	ENST00000526090.1	1449	9	4072	760	4072	-760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATCAACGGCAACTACA	NA	NA	NA	NA	NA	NA	NA	NA	45243811	45250622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_45243888_45244845_45244976_45247391_45247485_45248343_45248388_45249553_45249717_45250532
ENSMUSG00000037129.8_45243853_45250688_1	chr9	+	621	6	ISM	ENSMUSG00000037129.8	ENST00000526090.1	1449	9	4113	694	4113	-694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTGACCCTGTCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	45243852	45250688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_45243888_45244845_45244976_45247391_45247485_45248343_45248388_45249553_45249717_45250532
ENSMUSG00000037129.8_45244884_45250738_1	chr9	+	598	5	ISM	ENSMUSG00000037129.8	ENST00000526090.1	1449	9	5144	644	5144	-644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCAGCCCCTGTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	45244883	45250738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_45244976_45247391_45247485_45248343_45248388_45249553_45249717_45250532
ENSMUSG00000037134.18_78276026_78299207_1	chr8	+	2051	9	ISM	ENSMUSG00000037134.18	ENSMUST00000056237.15	2781	12	0	8760	0	-8760	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTTGGCTGCGACAT	NA	NA	NA	NA	NA	NA	NA	NA	78276025	78299207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637
ENSMUSG00000037134.18_78276270_78304035_1	chr8	+	2024	10	ISM	ENSMUSG00000037134.18	ENSMUST00000056237.15	2781	12	244	3932	231	-3932	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGACGCTGGTAGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	78276269	78304035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966
ENSMUSG00000037134.18_78285539_78307730_1	chr8	+	2024	10	ISM	ENSMUSG00000037134.18	ENSMUST00000056237.15	2781	12	9513	237	9500	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGCTGGACACCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	78285538	78307730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
ENSMUSG00000037134.18_78285593_78307782_1	chr8	+	2022	10	ISM	ENSMUSG00000037134.18	ENSMUST00000056237.15	2781	12	9567	185	9554	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGGATAATCCCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	78285592	78307782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
ENSMUSG00000037134.18_78285659_78307967_1	chr8	+	2141	10	ISM	ENSMUSG00000037134.18	ENSMUST00000056237.15	2781	12	9633	0	9620	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTGTATGTAACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	78285658	78307967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
ENSMUSG00000037148.9_77976995_78146728_1	chr8	-	2240	17	ISM	ENSMUSG00000037148.9	ENSMUST00000076316.6	3084	23	97854	0	97684	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTGTCCGGCCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	78146728	77976994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700
ENSMUSG00000037148.9_77977294_78152990_1	chr8	-	2161	19	ISM	ENSMUSG00000037148.9	ENSMUST00000076316.6	3084	23	91592	299	91422	254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGGCAGACCTCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	78152990	77977293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958
ENSMUSG00000037148.9_77977397_78159405_1	chr8	-	2165	20	ISM	ENSMUSG00000037148.9	ENSMUST00000076316.6	3084	23	85177	402	85007	151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGGCGGAAGCAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	78159405	77977396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368
ENSMUSG00000037148.9_77977548_78177552_1	chr8	-	2207	22	ISM	ENSMUSG00000037148.9	ENSMUST00000076316.6	3084	23	67030	553	66860	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGGCCGTGGGGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	78177552	77977547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456
ENSMUSG00000037148.9_77983989_78244412_1	chr8	-	2238	22	ISM	ENSMUSG00000037148.9	ENSMUST00000076316.6	3084	23	170	6994	0	-6441	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCATTTGAAATAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	78244412	77983988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78244258
ENSMUSG00000037148.9_77984034_78244412_1	chr8	-	2193	22	ISM	ENSMUSG00000037148.9	ENSMUST00000076316.6	3084	23	170	7039	0	-6486	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTCGGGCAGTGTACCC	NA	NA	NA	NA	NA	NA	NA	NA	78244412	77984033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78244258
ENSMUSG00000037149.11_13268882_13273703_1	chr12	-	992	4	ISM	ENSMUSG00000037149.11	ENST00000621973.2	2280	24	25435	-426	25435	426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTCCTTTGATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	13273703	13268881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676
ENSMUSG00000037149.11_13269106_13273998_1	chr12	-	913	6	ISM	ENSMUSG00000037149.11	ENST00000621973.2	2280	24	25140	-202	25140	202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTGTCTAGGTACATTA	NA	NA	NA	NA	NA	NA	NA	NA	13273998	13269105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942
ENSMUSG00000037149.11_13269308_13279433_1	chr12	-	1178	10	ISM	ENSMUSG00000037149.11	ENST00000678137.1	2400	26	19705	0	19705	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGCTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	13279433	13269307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277421_13279093_13279146_13279242
ENSMUSG00000037149.11_13269308_13281544_1	chr12	-	1397	12	ISM	ENSMUSG00000037149.11	ENST00000621973.2	2280	24	17594	0	17594	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGCTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	13281544	13269307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445
ENSMUSG00000037149.11_13269536_13286133_1	chr12	-	1369	14	ISM	ENSMUSG00000037149.11	ENST00000621973.2	2280	24	13005	228	13005	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTACCTTCCCAACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	13286133	13269535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994
ENSMUSG00000037149.11_13270346_13287328_1	chr12	-	1392	14	ISM	ENSMUSG00000037149.11	ENST00000621973.2	2280	24	11810	1038	11810	-1038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTCAGATGCTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	13287328	13270345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213
ENSMUSG00000037149.11_13270739_13287806_1	chr12	-	1346	14	ISM	ENSMUSG00000037149.11	ENST00000621973.2	2280	24	11332	1431	11332	-1431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTCCCAGAGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	13287806	13270738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729
ENSMUSG00000037149.11_13273793_13289568_1	chr12	-	1358	14	ISM	ENSMUSG00000037149.11	ENST00000621973.2	2280	24	9570	4485	9570	-4485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCAAGTTCTCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	13289568	13273792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491
ENSMUSG00000037149.11_13273943_13290645_1	chr12	-	1334	14	ISM	ENSMUSG00000037149.11	ENST00000621973.2	2280	24	8493	4635	8493	-4635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAGAAACTTTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	13290645	13273942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289533_13290559
ENSMUSG00000037149.11_13275400_13292350_1	chr12	-	1393	15	ISM	ENSMUSG00000037149.11	ENST00000621973.2	2280	24	6788	6092	6788	-6092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAATGTGCCTCGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	13292350	13275399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289533_13290559_13290644_13290851_13290936_13292300
ENSMUSG00000037149.11_13277305_13293957_1	chr12	-	1397	15	ISM	ENSMUSG00000037149.11	ENST00000621973.2	2280	24	5181	7997	5181	-7997	internal_fragment	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTGTCCTCACTTATT	NA	NA	NA	NA	NA	NA	NA	NA	13293957	13277304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289533_13290559_13290644_13290851_13290936_13292300_13292349_13293860
ENSMUSG00000037149.11_13279243_13290643_1	chr12	-	1004	10	ISM	ENSMUSG00000037149.11	ENST00000678137.1	2400	26	8495	9935	8495	-9935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCGCTGCGAGGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	13290643	13279242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559
ENSMUSG00000037149.11_13279380_13290899_1	chr12	-	915	11	ISM	ENSMUSG00000037149.11	ENST00000678137.1	2400	26	8239	10072	8239	-10072	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGATAATGCATTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	13290899	13279379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851
ENSMUSG00000037149.11_13280367_13293916_1	chr12	-	929	12	ISM	ENSMUSG00000037149.11	ENST00000678137.1	2400	26	5222	11059	5222	-11059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTACTCTGACTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	13293916	13280366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860
ENSMUSG00000037149.11_13284039_13295750_1	chr12	-	951	12	ISM	ENSMUSG00000037149.11	ENST00000678137.1	2400	26	3388	14731	3388	-14731	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTGTACTTTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	13295750	13284038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686
ENSMUSG00000037149.11_13286100_13299164_1	chr12	-	895	13	ISM	ENSMUSG00000037149.11	ENST00000678137.1	2400	26	-26	16792	-26	-16792	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCTCCAAAAGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	13299164	13286099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ENSMUSG00000037151.9_61362920_61416092_1	chr10	+	421	3	ISM	ENSMUSG00000037151.9	ENST00000373224.5	1325	4	82	2459	82	-2459	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAAGGATACTGGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	61362919	61416092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_61362989_61383826_61383995_61415908
ENSMUSG00000037151.9_61362945_61416170_1	chr10	+	474	3	ISM	ENSMUSG00000037151.9	ENST00000373224.5	1325	4	107	2381	107	-2381	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCAGCATACAGAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	61362944	61416170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_61362989_61383826_61383995_61415908
ENSMUSG00000037151.9_61383845_61416328_1	chr10	+	570	2	ISM	ENSMUSG00000037151.9	ENST00000358141.6	1175	3	19	2223	19	-2223	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGCTTGGTTACTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	61383844	61416328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_61383995_61415908
ENSMUSG00000037151.9_61383895_61416379_1	chr10	+	571	2	ISM	ENSMUSG00000037151.9	ENST00000358141.6	1175	3	69	2172	69	-2172	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGACCCCTCAGAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	61383894	61416379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_61383995_61415908
ENSMUSG00000037151.9_61383943_61416432_1	chr10	+	576	2	ISM	ENSMUSG00000037151.9	ENST00000358141.6	1175	3	117	2119	117	-2119	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGAGCCTCGCTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	61383942	61416432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_61383995_61415908
ENSMUSG00000037151.9_61416380_61418570_1	chr10	+	551	2	NNC	ENSMUSG00000037151.9	novel	1175	3	NA	NA	32554	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	744	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCTGGTGCTTGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	61416379	61418570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_61416790_61418429
ENSMUSG00000037152.12_51312098_51316409_1	chr3	-	1244	4	FSM	ENSMUSG00000037152.12	ENSMUST00000193279.2	315	4	-24	-905	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGGGTGGAACCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	51316409	51312097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_51313036_51314756_51314834_51315565_51315670_51316284
ENSMUSG00000037157.9_135460337_135478606_1	chr4	+	1585	6	ISM	ENSMUSG00000037157.9	ENSMUST00000102546.4	2569	7	4854	845	49	-75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAGCAGTCCACAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	135460336	135478606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_135460422_135461412_135461592_135464650_135464827_135471996_135472136_135475401_135475524_135477722
ENSMUSG00000037159.12_40420727_40440127_1	chr6	+	1459	9	ISM	ENSMUSG00000037159.12	ENSMUST00000038907.9	2884	12	930	3620	104	924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTCTTTACCCATCAATG	NA	NA	NA	NA	NA	NA	NA	NA	40420726	40440127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40421236_40426556_40426754_40429535_40429588_40432005_40432179_40433833_40433953_40437938_40438086_40438890_40438999_40439116_40439203_40440059
ENSMUSG00000037159.12_40420863_40441136_1	chr6	+	1489	10	ISM	ENSMUSG00000037159.12	ENSMUST00000038907.9	2884	12	1066	2611	240	1933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1588	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCCTTTCTTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	40420862	40441136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40421236_40426556_40426754_40429535_40429588_40432005_40432179_40433833_40433953_40437938_40438086_40438890_40438999_40439116_40439203_40440059_40440231_40441073
ENSMUSG00000037159.12_40420981_40442818_1	chr6	+	1520	11	ISM	ENSMUSG00000037159.12	ENSMUST00000038907.9	2884	12	1184	929	358	-406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1749	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGCTCAAGACACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	40420980	40442818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40421236_40426556_40426754_40429535_40429588_40432005_40432179_40433833_40433953_40437938_40438086_40438890_40438999_40439116_40439203_40440059_40440231_40441073_40441217_40442749
ENSMUSG00000037159.12_40421154_40443192_1	chr6	+	1454	12	NIC	ENSMUSG00000037159.12	novel	2021	12	NA	NA	531	-32	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGGATTAAGAAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	40421153	40443192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_40421236_40426556_40426754_40429535_40429588_40432005_40432179_40433833_40433953_40437938_40438086_40438890_40438999_40439116_40439203_40440059_40440231_40441073_40441217_40442749_40442878_40443144
ENSMUSG00000037159.12_40432127_40438934_1	chr6	+	362	4	ISM	ENSMUSG00000037159.12	ENSMUST00000038907.9	2884	12	12330	4813	114	-269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCCAGAAGAGGCTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	40432126	40438934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40432179_40433833_40433953_40437938_40438086_40438890
ENSMUSG00000037159.12_40433882_40439182_1	chr6	+	392	4	ISM	ENSMUSG00000037159.12	ENST00000397541.6	2021	12	13259	4042	1869	-21	internal_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGAGATCTTGCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	40433881	40439182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40433953_40437938_40438086_40438890_40438999_40439116
ENSMUSG00000037161.15_51296166_51299307_1	chr3	-	735	3	ISM	ENSMUSG00000037161.15	ENSMUST00000108046.8	1409	4	4640	333	4640	-333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTATAGTTGCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51299307	51296165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_51296745_51298646_51298741_51299245
ENSMUSG00000037161.15_51296276_51303924_1	chr3	-	744	4	FSM	ENSMUSG00000037161.15	ENSMUST00000038154.12	1232	4	45	443	23	-443	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGAAGAAAGCCCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	51303924	51296275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_51296745_51298646_51298741_51299245_51299350_51303847
ENSMUSG00000037166.6_28988862_28992748_2	chr7	+	337	3	FSM	ENSMUSG00000037166.6	ENST00000301242.9	506	3	104	65	104	-65	multi-exon	FALSE	canonical	NA	NA	NA	NA	2411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCTCTGCGCTCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	28988861	28992748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_28988961_28990934_28991020_28992595
ENSMUSG00000037166.6_28990934_28992748_1	chr7	+	124	2	ISM	ENSMUSG00000037166.6	ENST00000591291.5	391	3	2176	65	2176	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCTCTGCGCTCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	28990933	28992748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28991016_28992706
ENSMUSG00000037169.16_12986272_12991826_1	chr12	-	1530	2	FSM	ENSMUSG00000037169.16	ENST00000638417.1	1702	2	-1	173	-1	-173	multi-exon	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTAGCCTGTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	12991826	12986271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_12987612_12991636
ENSMUSG00000037172.15_40383692_40395496_1	chr6	-	700	6	ISM	ENSMUSG00000037172.15	ENST00000482493.1	1489	8	5262	446	5262	-446	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCCCTGTTGTCCTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	40395496	40383691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_40383869_40385202_40385272_40385992_40386144_40386275_40386408_40388539_40388640_40395425
ENSMUSG00000037172.15_40385220_40399788_1	chr6	-	718	6	ISM	ENSMUSG00000037172.15	ENST00000482493.1	1489	8	970	1974	970	-786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGACCTCTTTGTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	40399788	40385219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_40385272_40385992_40386144_40386275_40386408_40388539_40388640_40395425_40395580_40399659
ENSMUSG00000037190.13_107417076_107418724_1	chr9	-	576	3	FSM	ENSMUSG00000037190.13	ENSMUST00000041459.9	1786	3	340	870	340	-302	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGTTATTACGAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	107418724	107417075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_107417585_107418201_107418240_107418695
ENSMUSG00000037196.7_10621941_10795543_1	chr17	-	719	3	NNC	ENSMUSG00000037196.7	novel	1475	5	NA	NA	263337	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCACCCTTTGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	10795543	10621940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_10622408_10742666_10742769_10795393
ENSMUSG00000037196.7_10621941_10795543_2	chr17	-	617	2	ISM	ENSMUSG00000037196.7	ENSMUST00000041463.7	1475	5	263655	0	263337	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCACCCTTTGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	10795543	10621940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_10622408_10795393
ENSMUSG00000037196.7_10621941_10816170_1	chr17	-	900	4	ISM	ENSMUSG00000037196.7	ENST00000337019.7	1365	6	242710	99	242710	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCACCCTTTGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	10816170	10621940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_10622408_10742659_10742769_10795393_10795544_10815996
ENSMUSG00000037196.7_10622236_11058725_1	chr17	-	816	6	FSM	ENSMUSG00000037196.7	ENST00000337019.7	1365	6	155	394	155	-295	multi-exon	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGAGGGAGCCTCCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	11058725	10622235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_10622408_10742659_10742769_10795393_10795544_10815996_10816169_10996021_10996157_11058647
ENSMUSG00000037196.7_10622288_11058781_1	chr17	-	820	6	FSM	ENSMUSG00000037196.7	ENST00000337019.7	1365	6	99	446	99	-347	multi-exon	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATGGTGCCTACCTAT	NA	NA	NA	NA	NA	NA	NA	NA	11058781	10622287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_10622408_10742659_10742769_10795393_10795544_10815996_10816169_10996021_10996157_11058647
ENSMUSG00000037196.7_10622342_11058828_1	chr17	-	813	6	FSM	ENSMUSG00000037196.7	ENST00000337019.7	1365	6	52	500	52	-401	multi-exon	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCCTAGAAGCCTTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	11058828	10622341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_10622408_10742659_10742769_10795393_10795544_10815996_10816169_10996021_10996157_11058647
ENSMUSG00000037196.7_10816050_11059020_1	chr17	-	627	3	ISM	ENSMUSG00000037196.7	ENSMUST00000041463.7	1475	5	178	194109	-140	-194109	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGAGGGAACAAGATTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	11059020	10816049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_10816169_10996021_10996157_11058647
ENSMUSG00000037197.12_11590250_11605532_1	chr2	-	1384	11	ISM	ENSMUSG00000037197.12	ENSMUST00000040314.12	1599	12	2541	2	2541	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	11605532	11590249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429
ENSMUSG00000037197.12_11590398_11607939_1	chr2	-	1315	12	FSM	ENSMUSG00000037197.12	ENSMUST00000040314.12	1599	12	134	150	134	-150	multi-exon	FALSE	canonical	NA	NA	NA	NA	1721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGACTGAACAATGACAC	NA	NA	NA	NA	NA	NA	NA	NA	11607939	11590397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ENSMUSG00000037197.12_11590455_11608073_1	chr2	-	1392	12	FSM	ENSMUSG00000037197.12	ENSMUST00000040314.12	1599	12	0	207	0	-207	multi-exon	FALSE	canonical	NA	NA	NA	NA	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGCAGAGCAAGTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	11608073	11590454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ENSMUSG00000037197.12_11590482_11608073_1	chr2	-	1365	12	FSM	ENSMUSG00000037197.12	ENSMUST00000040314.12	1599	12	0	234	0	-234	multi-exon	FALSE	canonical	NA	NA	NA	NA	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTTGGATAAATTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	11608073	11590481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ENSMUSG00000037204.8_101182272_101188826_1	chr15	+	1151	3	FSM	ENSMUSG00000037204.8	ENSMUST00000048393.8	1270	3	119	0	119	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTTGGCCTGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	101182271	101188826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_101182427_101184813_101185132_101188148
ENSMUSG00000037206.16_58065056_58065828_1	chr9	-	577	2	FSM	ENSMUSG00000037206.16	ENSMUST00000168864.4	2076	2	0	1499	0	-1499	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGCTCAACCACAACCG	NA	NA	NA	NA	NA	NA	NA	NA	58065828	58065055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_58065514_58065709
ENSMUSG00000037210.17_34527539_34567994_1	chr5	+	303	2	ISM	ENSMUSG00000037210.17	ENSMUST00000180376.8	5536	21	262	75806	262	-75097	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTGAACGAAAAGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	34527538	34567994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34527772_34567924
ENSMUSG00000037210.17_34527606_34568030_1	chr5	+	272	2	ISM	ENSMUSG00000037210.17	ENSMUST00000180376.8	5536	21	329	75770	329	-75061	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTAAGACTGCGAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	34527605	34568030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34527772_34567924
ENSMUSG00000037210.17_34527656_34568084_1	chr5	+	276	2	ISM	ENSMUSG00000037210.17	ENSMUST00000180376.8	5536	21	379	75716	379	-75007	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCACCTGCCGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	34527655	34568084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34527772_34567924
ENSMUSG00000037210.17_34568109_34578194_1	chr5	+	281	3	ISM	ENSMUSG00000037210.17	ENSMUST00000180376.8	5536	21	40832	65606	-10019	-64897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTCCGATGCATATACCG	NA	NA	NA	NA	NA	NA	NA	NA	34568108	34578194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34568168_34577344_34577500_34578127
ENSMUSG00000037210.17_34578144_34623099_1	chr5	+	3050	16	ISM	ENSMUSG00000037210.17	ENST00000324666.9	4745	18	16	20693	16	-19992	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGATCGGCCAAGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	34578143	34623099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917
ENSMUSG00000037210.17_34578188_34616591_1	chr5	+	2148	12	ISM	ENSMUSG00000037210.17	ENST00000502458.5	4018	18	60	26521	60	-26500	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCAGTTCAAGGTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	34578187	34616591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34578296_34583610_34583846_34588475_34588601_34593794_34594012_34596654_34596733_34597464_34597578_34597691_34597935_34600650_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341
ENSMUSG00000037210.17_34578199_34623156_1	chr5	+	3052	16	ISM	ENSMUSG00000037210.17	ENST00000324666.9	4745	18	71	20636	71	-19935	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCAACAGAGTCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	34578198	34623156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917
ENSMUSG00000037210.17_34583681_34618569_1	chr5	+	2142	12	ISM	ENSMUSG00000037210.17	ENST00000502458.5	4018	18	5553	24543	0	-24522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTCCAAACCTTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	34583680	34618569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34583846_34588475_34588601_34593794_34594012_34596654_34596733_34597464_34597578_34597691_34597935_34600650_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438
ENSMUSG00000037210.17_34583681_34618594_1	chr5	+	2167	12	ISM	ENSMUSG00000037210.17	ENST00000502458.5	4018	18	5553	24518	0	-24497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCCCAAAACTGCAACC	NA	NA	NA	NA	NA	NA	NA	NA	34583680	34618594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34583846_34588475_34588601_34593794_34594012_34596654_34596733_34597464_34597578_34597691_34597935_34600650_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438
ENSMUSG00000037210.17_34583681_34618664_1	chr5	+	2237	12	ISM	ENSMUSG00000037210.17	ENST00000502458.5	4018	18	5553	24448	0	-24427	internal_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACCCCCGCCCTCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	34583680	34618664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34583846_34588475_34588601_34593794_34594012_34596654_34596733_34597464_34597578_34597691_34597935_34600650_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438
ENSMUSG00000037210.17_34583681_34623321_1	chr5	+	3050	15	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	0	19770	0	-19770	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACCCCTCCAAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	34583680	34623321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917
ENSMUSG00000037210.17_34583681_34623390_1	chr5	+	3119	15	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	0	19701	0	-19701	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGACATGATGCATCATC	NA	NA	NA	NA	NA	NA	NA	NA	34583680	34623390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917
ENSMUSG00000037210.17_34588563_34619516_1	chr5	+	2131	12	ISM	ENSMUSG00000037210.17	ENST00000502458.5	4018	18	10435	23596	4882	-23575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCGAGCACAGCTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	34588562	34619516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34588601_34593794_34594012_34596654_34596733_34597464_34597578_34597691_34597935_34600650_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427
ENSMUSG00000037210.17_34588563_34623549_1	chr5	+	3026	14	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	4882	19542	4882	-19542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGACCTTGCTCTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	34588562	34623549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917
ENSMUSG00000037210.17_34593874_34623722_1	chr5	+	3082	13	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	10193	19369	10193	-19369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTCAGCCCAAGGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	34593873	34623722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917
ENSMUSG00000037210.17_34593902_34621371_1	chr5	+	2135	12	ISM	ENSMUSG00000037210.17	ENST00000502458.5	4018	18	15774	21741	10221	-21720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGCCTGACTAAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	34593901	34621371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34594012_34596654_34596733_34597464_34597578_34597691_34597935_34600650_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317
ENSMUSG00000037210.17_34597492_34623008_1	chr5	+	2188	11	ISM	ENSMUSG00000037210.17	ENST00000502458.5	4018	18	19364	20104	13811	-20083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGAAGAAGAGGAGGACGAG	NA	NA	NA	NA	NA	NA	NA	NA	34597491	34623008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34597578_34597691_34597935_34600650_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917
ENSMUSG00000037210.17_34597506_34633055_1	chr5	+	3059	12	ISM	ENSMUSG00000037210.17	ENST00000324666.9	4745	18	19378	10737	13825	-10036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATTTTACAGATGATG	NA	NA	NA	NA	NA	NA	NA	NA	34597505	34633055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34632959
ENSMUSG00000037210.17_34597775_34643091_1	chr5	+	3094	12	ISM	ENSMUSG00000037210.17	ENST00000324666.9	4745	18	19647	701	14094	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGACTGCCTGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	34597774	34643091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34632959_34633152_34642997
ENSMUSG00000037210.17_34597846_34643131_1	chr5	+	3063	12	ISM	ENSMUSG00000037210.17	ENST00000324666.9	4745	18	19718	661	14165	19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCGCCACTCAAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	34597845	34643131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34632959_34633152_34642997
ENSMUSG00000037210.17_34597906_34643182_1	chr5	+	3054	12	ISM	ENSMUSG00000037210.17	ENST00000324666.9	4745	18	19778	610	14225	70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCCAGGGTGTGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	34597905	34643182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34632959_34633152_34642997
ENSMUSG00000037210.17_34600954_34643401_1	chr5	+	3059	10	ISM	ENSMUSG00000037210.17	ENST00000324666.9	4745	18	22826	391	17273	289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGTGGCTCTGTCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	34600953	34643401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34632959_34633152_34642997
ENSMUSG00000037210.17_34601066_34643487_1	chr5	+	3033	10	ISM	ENSMUSG00000037210.17	ENST00000324666.9	4745	18	22938	305	17385	-305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTCCCACCCAAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	34601065	34643487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34632959_34633152_34642997
ENSMUSG00000037210.17_34615247_34643800_1	chr5	+	3059	8	ISM	ENSMUSG00000037210.17	ENST00000324666.9	4745	18	37119	-8	31566	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTCTGGTTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	34615246	34643800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34632959_34633152_34642997
ENSMUSG00000037210.17_34615314_34643091_1	chr5	+	2173	8	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	31633	0	31633	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGACTGCCTGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	34615313	34643091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ENSMUSG00000037210.17_34615389_34643113_1	chr5	+	2120	8	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	31708	-22	31708	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGCAGCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	34615388	34643113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ENSMUSG00000037214.13_26648283_26654051_1	chr8	+	2053	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	114	128	114	-128	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTGGACAAGTGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	26648282	26654051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_26648550_26650802_26650999_26652461
ENSMUSG00000037214.13_26648383_26654179_1	chr8	+	2081	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	214	0	214	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGCCCTGCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	26648382	26654179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_26648550_26650802_26650999_26652461
ENSMUSG00000037214.13_26648420_26654179_1	chr8	+	2044	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	251	0	251	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGCCCTGCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	26648419	26654179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_26648550_26650802_26650999_26652461
ENSMUSG00000037221.14_137594907_137598599_1	chr5	-	947	5	FSM	ENSMUSG00000037221.14	ENSMUST00000111007.8	1318	5	371	0	371	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAACGTAGGATGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	137598599	137594906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_137595316_137595412_137595578_137597855_137598086_137598238_137598315_137598532
ENSMUSG00000037235.14_34334095_34336268_1	chr5	-	677	3	ISM	ENSMUSG00000037235.14	ENSMUST00000119171.2	1160	5	8796	172	8786	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGAGTCCAGCGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	34336268	34334094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34334494_34334941_34335105_34336153
ENSMUSG00000037236.17_35695270_35710643_1	chr18	+	1202	3	ISM	ENSMUSG00000037236.17	ENST00000510056.5	3032	14	-2	13198	-2	-12874	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGTCGATGCCAGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	35695269	35710643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35695346_35704895_35705989_35710610
ENSMUSG00000037236.17_35704980_35715900_1	chr18	+	1831	9	ISM	ENSMUSG00000037236.17	ENSMUST00000237744.2	2845	15	9474	7617	9474	-7617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATTGCTTAGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	35704979	35715900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768
ENSMUSG00000037236.17_35705140_35714248_1	chr18	+	1145	6	ISM	ENSMUSG00000037236.17	ENSMUST00000237744.2	2845	15	9634	9269	9634	-9269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTTTCAGCGAGGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35705139	35714248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222
ENSMUSG00000037236.17_35705241_35714673_1	chr18	+	1168	7	ISM	ENSMUSG00000037236.17	ENSMUST00000237744.2	2845	15	9735	8844	9735	-8844	internal_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATGCTCAGGCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	35705240	35714673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649
ENSMUSG00000037236.17_35705301_35714714_1	chr18	+	1149	7	ISM	ENSMUSG00000037236.17	ENSMUST00000237744.2	2845	15	9795	8803	9795	-8803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTAGTGTTTGGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	35705300	35714714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649
ENSMUSG00000037236.17_35705451_35715072_1	chr18	+	1161	8	ISM	ENSMUSG00000037236.17	ENSMUST00000237744.2	2845	15	9945	8445	9945	-8445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCTCAAGCTTGCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	35705450	35715072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971
ENSMUSG00000037236.17_35705583_35715900_1	chr18	+	1228	9	ISM	ENSMUSG00000037236.17	ENSMUST00000237744.2	2845	15	10077	7617	10077	-7617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATTGCTTAGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	35705582	35715900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768
ENSMUSG00000037236.17_35705768_35717648_1	chr18	+	1168	11	ISM	ENSMUSG00000037236.17	ENSMUST00000237744.2	2845	15	10262	5869	10262	-5869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTGAGGGTAAAGAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	35705767	35717648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567
ENSMUSG00000037236.17_35705815_35717703_1	chr18	+	1176	11	ISM	ENSMUSG00000037236.17	ENSMUST00000237744.2	2845	15	10309	5814	10309	-5814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGATGACCAGACAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	35705814	35717703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567
ENSMUSG00000037236.17_35705887_35717746_1	chr18	+	1147	11	ISM	ENSMUSG00000037236.17	ENSMUST00000237744.2	2845	15	10381	5771	10381	-5771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGATGAACTGCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	35705886	35717746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567
ENSMUSG00000037236.17_35710609_35717934_1	chr18	+	1235	10	ISM	ENSMUSG00000037236.17	ENSMUST00000237744.2	2845	15	15103	5583	15103	-5583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGTTTTATATTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	35710608	35717934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567
ENSMUSG00000037236.17_35711958_35720761_1	chr18	+	1207	9	ISM	ENSMUSG00000117694.2	ENSMUST00000237592.2	1515	15	25495	0	25495	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGTGCCGAATCTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	35711957	35720761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683
ENSMUSG00000037236.17_35711958_35723851_1	chr18	+	1893	11	ISM	ENSMUSG00000037236.17	ENSMUST00000235199.2	3107	15	16460	-60	16452	10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTGTATTTTTTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	35711957	35723851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUSG00000037236.17_35714222_35723517_1	chr18	+	1272	8	ISM	ENSMUSG00000037236.17	ENST00000510056.5	3032	14	18950	324	18716	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTGATTTTAATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	35714221	35723517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35723432
ENSMUSG00000037236.17_35714280_35724026_1	chr18	+	1845	9	ISM	ENSMUSG00000037236.17	ENSMUST00000235199.2	3107	15	18782	-235	18774	185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAGATGATAAGAAATATT	NA	NA	NA	NA	NA	NA	NA	NA	35714279	35724026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUSG00000037236.17_35714648_35723634_1	chr18	+	1264	7	ISM	ENSMUSG00000037236.17	ENST00000510056.5	3032	14	19376	207	19142	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTACACATACGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	35714647	35723634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35723432
ENSMUSG00000037236.17_35714687_35724139_1	chr18	+	1852	8	ISM	ENSMUSG00000037236.17	ENSMUST00000235199.2	3107	15	19189	-348	19181	298	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCCGTTCTCTTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	35714686	35724139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUSG00000037236.17_35715022_35724277_1	chr18	+	1851	7	ISM	ENSMUSG00000037236.17	ENSMUST00000235960.2	2638	13	19758	195	19516	-195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTACATTTCTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	35715021	35724277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUSG00000037236.17_35715766_35723851_1	chr18	+	1188	5	ISM	ENSMUSG00000037236.17	ENST00000510056.5	3032	14	20494	-10	20260	10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTGTATTTTTTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	35715765	35723851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35723432
ENSMUSG00000037236.17_35715766_35724472_1	chr18	+	1931	6	ISM	ENSMUSG00000037236.17	ENSMUST00000235960.2	2638	13	20502	0	20260	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGGTCATGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	35715765	35724472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUSG00000037236.17_35721439_35725200_1	chr18	+	1836	2	ISM	ENSMUSG00000037236.17	ENSMUST00000235960.2	2638	13	26175	-728	25933	728	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCAAATGCAAACAAATACG	NA	NA	NA	NA	NA	NA	NA	NA	35721438	35725200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35721507_35723432
ENSMUSG00000037242.9_134943675_134966189_1	chr4	-	1334	5	ISM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	33936	2395	33936	-2395	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTAGTATGGCGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	134966189	134943674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172
ENSMUSG00000037242.9_134943709_134966266_1	chr4	-	1377	5	ISM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	33859	2429	33859	-2429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGTATCACCCAGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	134966266	134943708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172
ENSMUSG00000037242.9_134943887_134999945_1	chr4	-	1332	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	180	2607	180	-2607	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTAGAGACACTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	134999945	134943886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ENSMUSG00000037242.9_134943935_135000000_1	chr4	-	1339	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	125	2655	125	-2655	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTTTCAGAGTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	135000000	134943934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ENSMUSG00000037242.9_134944012_135000125_1	chr4	-	1387	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	0	2732	0	-2732	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATAGGAACATTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	135000125	134944011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ENSMUSG00000037257.9_63523968_63542669_1	chr9	+	545	5	ISM	ENSMUSG00000037257.9	ENST00000542650.5	801	8	1	4258	0	-4258	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	728	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGAATTTTCACATCTT	NA	NA	NA	NA	NA	NA	NA	NA	63523967	63542669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586
ENSMUSG00000037257.9_63523978_63548230_1	chr9	+	1532	9	ISM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	14036	3640	10	643	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2787	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCTCCCCACTGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	63523977	63548230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
ENSMUSG00000037257.9_63524060_63543712_1	chr9	+	494	6	NNC	ENSMUSG00000037257.9	novel	801	8	NA	NA	92	-3215	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCACAGTGGTGCGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	63524059	63543712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543671
ENSMUSG00000037257.9_63524061_63548313_1	chr9	+	1532	9	ISM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	14119	3557	93	726	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2525	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACTGGCAGCTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	63524060	63548313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
ENSMUSG00000037257.9_63524079_63543725_1	chr9	+	494	6	ISM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	14137	8145	111	-3202	internal_fragment	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTGGCTCAGCAGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	63524078	63543725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665
ENSMUSG00000037257.9_63524134_63546340_1	chr9	+	498	7	ISM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	14192	5530	166	-587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAAGAACTAGCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	63524133	63546340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321
ENSMUSG00000037257.9_63524270_63546426_1	chr9	+	559	6	ISM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	14328	5444	302	-501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATCCCAGCATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	63524269	63546426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321
ENSMUSG00000037257.9_63526429_63546924_1	chr9	+	423	5	ISM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	16487	4946	2461	-3	internal_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGACGACCCGCAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	63526428	63546924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874
ENSMUSG00000037257.9_63526429_63546928_1	chr9	+	421	5	NNC	ENSMUSG00000037257.9	novel	801	8	NA	NA	2461	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGACCCGCAGGTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	63526428	63546928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_63526514_63542586_63542670_63543671_63543766_63546321_63546427_63546874
ENSMUSG00000037259.16_144316835_144367591_1	chr2	-	2250	20	NNC	ENSMUSG00000037259.16	novel	2293	21	NA	NA	25	4099	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGGAGGCTGCAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	144367591	144316834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_144317010_144317992_144318068_144320934_144321063_144321524_144321606_144323554_144323656_144324050_144324148_144325276_144325352_144326531_144326636_144330540_144330731_144332032_144332198_144333691_144333815_144343346_144343440_144344837_144344952_144346259_144346378_144348078_144348165_144352087_144352156_144353410_144353508_144355315_144355431_144364332_144364487_144367500
ENSMUSG00000037259.16_144316835_144367591_2	chr2	-	2253	20	NNC	ENSMUSG00000037259.16	novel	2293	21	NA	NA	25	4099	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGGAGGCTGCAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	144367591	144316834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_144317010_144317992_144318062_144320930_144321063_144321524_144321606_144323554_144323656_144324050_144324148_144325276_144325352_144326531_144326636_144330540_144330731_144332032_144332198_144333691_144333815_144343346_144343440_144344837_144344952_144346259_144346378_144348078_144348165_144352087_144352156_144353410_144353508_144355311_144355431_144364332_144364487_144367499
ENSMUSG00000037259.16_144316835_144367591_3	chr2	-	2250	20	NNC	ENSMUSG00000037259.16	novel	2293	21	NA	NA	25	4099	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGGAGGCTGCAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	144367591	144316834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_144317010_144317992_144318068_144320934_144321063_144321524_144321606_144323554_144323656_144324050_144324148_144325276_144325352_144326531_144326636_144330540_144330731_144332032_144332198_144333691_144333815_144343346_144343440_144344837_144344952_144346260_144346378_144348078_144348165_144352087_144352156_144353410_144353508_144355315_144355431_144364332_144364487_144367499
ENSMUSG00000037259.16_144321015_144344859_1	chr2	-	976	10	FSM	ENSMUSG00000037259.16	ENST00000329494.9	1149	10	92	81	92	-81	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTGTTGTGAATAAACA	NA	NA	NA	NA	NA	NA	NA	NA	144344859	144321014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_144321063_144321524_144321606_144323554_144323656_144324050_144324148_144325276_144325352_144326531_144326636_144330540_144330731_144332032_144332198_144343346_144343440_144344837
ENSMUSG00000037259.16_144330559_144343367_1	chr2	-	502	4	ISM	ENSMUSG00000037259.16	ENSMUST00000163701.2	6834	21	25951	18082	1584	-9625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCAGCCCGGGAAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	144343367	144330558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_144330749_144332032_144332198_144333691_144333818_144343346
ENSMUSG00000037259.16_144330714_144344880_1	chr2	-	462	5	ISM	ENSMUSG00000037259.16	ENSMUST00000163701.2	6834	21	24438	18237	71	-9780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACATCTGCCAGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	144344880	144330713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_144330749_144332032_144332198_144333691_144333818_144343346_144343440_144344837
ENSMUSG00000037259.16_144344939_144353578_1	chr2	-	456	5	NIC	ENSMUSG00000037259.16	novel	2355	18	NA	NA	359	-24005	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATGTGGCAGTATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	144353578	144344938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_144344955_144346259_144346378_144348078_144348165_144352087_144352156_144353410
ENSMUSG00000037259.16_144346362_144353716_1	chr2	-	476	4	ISM	ENSMUSG00000037259.16	ENST00000357236.8	2355	18	221	34754	221	-25428	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCGTCCATCTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	144353716	144346361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_144346378_144348078_144348165_144352087_144352156_144353410
ENSMUSG00000037260.9_26434911_26438039_1	chr8	-	695	4	ISM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	28742	430	28742	-430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTCTGGACATTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	26438039	26434910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961
ENSMUSG00000037260.9_26435108_26443346_1	chr8	-	623	6	ISM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	23435	627	23435	-627	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGCAGCCTCCCTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	26443346	26435107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308
ENSMUSG00000037260.9_26435156_26443404_1	chr8	-	633	6	ISM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	23377	675	23377	-675	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGCTGAAATACATAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	26443404	26435155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308
ENSMUSG00000037260.9_26435272_26444686_1	chr8	-	601	7	ISM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	22095	791	22095	-791	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGATGAGCAGTCACACAAA	NA	NA	NA	NA	NA	NA	NA	NA	26444686	26435271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633
ENSMUSG00000037260.9_26435317_26444755_1	chr8	-	625	7	ISM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	22026	836	22026	-836	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACGAGGTGTTGGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	26444755	26435316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633
ENSMUSG00000037260.9_26436500_26447295_1	chr8	-	654	7	ISM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	19486	2019	19486	-2019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATTCCAATAAACAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	26447295	26436499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217
ENSMUSG00000037260.9_26442026_26450893_1	chr8	-	655	7	ISM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	15888	7545	15888	-7545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTGTGATGGCGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	26450893	26442025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853
ENSMUSG00000037260.9_26443382_26453447_1	chr8	-	626	7	ISM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	13334	8901	13334	-8901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGGAGCAGCTGGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	26453447	26443381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382
ENSMUSG00000037260.9_26444634_26454891_1	chr8	-	681	7	ISM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	11890	10153	11890	-10153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGACCCCTTGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	26454891	26444633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821
ENSMUSG00000037260.9_26445754_26461121_1	chr8	-	624	8	ISM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	5660	11273	5660	-11273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTTGGAGTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	26461121	26445753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074
ENSMUSG00000037260.9_26447291_26461663_1	chr8	-	632	8	ISM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	5118	12810	5118	-12810	internal_fragment	TRUE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTGGAGAAGCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	26461663	26447290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593
ENSMUSG00000037260.9_26447331_26461730_1	chr8	-	659	8	ISM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	5051	12850	5051	-12850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCAACGAGGATGTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	26461730	26447330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593
ENSMUSG00000037260.9_26450883_26462941_1	chr8	-	623	7	ISM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	3840	16402	3840	-16402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGTACTTCAAACATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	26462941	26450882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869
ENSMUSG00000037260.9_26453447_26466633_1	chr8	-	636	7	ISM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	148	18966	148	-18966	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACCAACCAGAAACTCGG	NA	NA	NA	NA	NA	NA	NA	NA	26466633	26453446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
ENSMUSG00000037262.8_10085404_10096864_1	chr2	+	750	5	FSM	ENSMUSG00000037262.8	ENSMUST00000042512.8	1472	5	-31	753	-31	-753	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGGAAACGGAAAGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	10085403	10096864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_10085556_10090540_10090636_10094923_10094968_10095051_10095175_10096528
ENSMUSG00000037262.8_10090539_10096990_1	chr2	+	726	4	ISM	ENSMUSG00000037262.8	ENSMUST00000042512.8	1472	5	5104	627	5104	-627	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGGGGATCGTTGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	10090538	10096990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_10090636_10094923_10094968_10095051_10095175_10096528
ENSMUSG00000037266.19_134651329_134654497_1	chr4	+	939	4	FSM	ENSMUSG00000037266.19	ENST00000243189.12	1149	4	76	134	76	-134	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGAGGTTTCTCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	134651328	134654497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_134651794_134652603_134652738_134654045_134654130_134654241
ENSMUSG00000037266.19_134651608_134654108_1	chr4	+	389	3	ISM	ENSMUSG00000037266.19	ENSMUST00000078084.7	1749	5	705	874	355	-523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAGCCTTCAGCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	134651607	134654108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_134651794_134652603_134652744_134654045
ENSMUSG00000037266.19_134651771_134654334_1	chr4	+	340	4	ISM	ENSMUSG00000037266.19	ENSMUST00000078084.7	1749	5	868	648	518	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGACTGTGGATACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	134651770	134654334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_134651794_134652603_134652744_134654045_134654130_134654241
ENSMUSG00000037275.15_58012552_58025660_1	chr11	-	1460	8	ISM	ENSMUSG00000037275.15	ENSMUST00000102711.9	4919	28	33705	436	33611	-95	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCTGACGCTGTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	58025660	58012551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589
ENSMUSG00000037275.15_58012582_58025737_1	chr11	-	1507	8	ISM	ENSMUSG00000037275.15	ENSMUST00000102711.9	4919	28	33628	466	33534	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGTCTTGCTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	58025737	58012581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589
ENSMUSG00000037275.15_58015754_58027821_1	chr11	-	1526	7	ISM	ENSMUSG00000037275.15	ENST00000285873.8	4488	28	31450	3297	31450	-3297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAGGGCCGGGACCATGA	NA	NA	NA	NA	NA	NA	NA	NA	58027821	58015753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683
ENSMUSG00000037275.15_58015992_58029967_1	chr11	-	1510	9	ISM	ENSMUSG00000037275.15	ENSMUST00000172035.8	6213	28	29398	5164	29304	-3535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGCGTTTGCTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	58029967	58015991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844
ENSMUSG00000037275.15_58016211_58032471_1	chr11	-	1463	11	ISM	ENSMUSG00000037275.15	ENSMUST00000172035.8	6213	28	26894	5383	26800	-3754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTGCCATGGCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	58032471	58016210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413
ENSMUSG00000037275.15_58019680_58037358_1	chr11	-	1533	11	ISM	ENSMUSG00000037275.15	ENSMUST00000172035.8	6213	28	22007	8852	21913	-7223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGGAAAAACAGCCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	58037358	58019679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218
ENSMUSG00000037275.15_58021469_58039314_1	chr11	-	1532	11	ISM	ENSMUSG00000037275.15	ENSMUST00000172035.8	6213	28	20051	10641	19957	-9012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCAGAGAGAGGTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	58039314	58021468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240
ENSMUSG00000037275.15_58029845_58046670_1	chr11	-	1546	11	ISM	ENSMUSG00000037275.15	ENST00000285873.8	4488	28	12601	17388	12601	-17388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCGAGCCTGCCCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	58046670	58029844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457
ENSMUSG00000037275.15_58036277_58055159_1	chr11	-	1481	12	ISM	ENSMUSG00000037275.15	ENST00000285873.8	4488	28	4112	23820	4112	-23820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTCCCCAGTGGATCCA	NA	NA	NA	NA	NA	NA	NA	NA	58055159	58036276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082
ENSMUSG00000037275.15_58036322_58055226_1	chr11	-	1503	12	ISM	ENSMUSG00000037275.15	ENST00000285873.8	4488	28	4045	23865	4045	-23865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTCAATTTCCGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	58055226	58036321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082
ENSMUSG00000037275.15_58038653_58056900_1	chr11	-	1528	11	ISM	ENSMUSG00000037275.15	ENST00000285873.8	4488	28	2371	26196	2371	-26196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACACTGACTTCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	58056900	58038652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718
ENSMUSG00000037278.10_78432643_78441603_1	chr11	-	1370	3	NNC	ENSMUSG00000037278.10	novel	1375	3	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTGTTGTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	78441603	78432642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_78433623_78434311_78434452_78441353
ENSMUSG00000037286.16_100678757_100812029_1	chr9	+	1830	17	ISM	ENSMUSG00000037286.16	ENST00000629124.2	4276	34	153085	26736	153085	-26736	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTCATTGACCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	100678756	100812029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893
ENSMUSG00000037295.8_134473706_134476710_1	chr4	-	903	3	ISM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	18625	4841	18602	-483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCACCTCTGTGGCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	134476710	134473705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134474511_134475592_134475628_134476647
ENSMUSG00000037295.8_134473887_134477315_1	chr4	-	838	3	ISM	ENSMUSG00000037295.8	ENST00000374338.5	2170	8	17997	664	17997	-664	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGCACTTTAACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	134477315	134473886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134474544_134476643_134476779_134477269
ENSMUSG00000037295.8_134473887_134482537_1	chr4	-	981	6	ISM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	12798	5022	12775	-664	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGCACTTTAACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	134482537	134473886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503
ENSMUSG00000037295.8_134474015_134482603_1	chr4	-	919	6	ISM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	12732	5150	12709	-792	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCCGTTCTTTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	134482603	134474014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503
ENSMUSG00000037295.8_134474350_134486274_1	chr4	-	759	7	ISM	ENSMUSG00000037295.8	ENST00000374338.5	2170	8	9038	1127	9038	-1127	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATACACTACTGGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	134486274	134474349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134474544_134476643_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229
ENSMUSG00000037295.8_134474392_134495190_1	chr4	-	877	9	FSM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	145	5527	122	-1169	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGATGATGACGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	134495190	134474391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
ENSMUSG00000037295.8_134474441_134495335_1	chr4	-	973	9	FSM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	0	5576	0	-1218	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTATCGCCCACCGA	NA	NA	NA	NA	NA	NA	NA	NA	134495335	134474440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
ENSMUSG00000037296.8_26275483_26292292_1	chr8	+	785	4	FSM	ENSMUSG00000037296.8	ENSMUST00000038421.8	2663	4	167	1711	-117	140	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTCTTCAGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	26275482	26292292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_26275746_26282184_26282254_26283704_26283821_26291955
ENSMUSG00000037296.8_26282185_26292547_1	chr8	+	777	3	ISM	ENSMUSG00000037296.8	ENSMUST00000038421.8	2663	4	6869	1456	6585	395	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGAACTGTCACAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	26282184	26292547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26282254_26283704_26283821_26291955
ENSMUSG00000037300.20_125398475_125415737_1	chr8	-	1947	14	ISM	ENSMUSG00000037300.20	ENST00000366661.9	2911	23	32986	0	32966	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCTTGTCTTCACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	125415737	125398474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595
ENSMUSG00000037300.20_125398649_125401170_1	chr8	-	517	4	ISM	ENSMUSG00000037300.20	ENST00000366661.9	2911	23	47553	174	47533	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAAACGGGTTTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	125401170	125398648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100
ENSMUSG00000037300.20_125398668_125421589_1	chr8	-	1858	16	ISM	ENSMUSG00000037300.20	ENST00000366661.9	2911	23	27134	193	27114	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAACCGTAAGAGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	125421589	125398667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568
ENSMUSG00000037300.20_125398769_125422409_1	chr8	-	1882	17	ISM	ENSMUSG00000037300.20	ENST00000366661.9	2911	23	26314	294	26294	-294	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTAAGACATGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	125422409	125398768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374
ENSMUSG00000037300.20_125398825_125422457_1	chr8	-	1874	17	ISM	ENSMUSG00000037300.20	ENST00000366661.9	2911	23	26266	350	26246	-350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCAGATCAGAGGATTTA	NA	NA	NA	NA	NA	NA	NA	NA	125422457	125398824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374
ENSMUSG00000037300.20_125398894_125424780_1	chr8	-	1884	18	ISM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	23937	822	23923	-419	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGACTCTGAGGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	125424780	125398893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732
ENSMUSG00000037300.20_125398903_125422491_1	chr8	-	1830	17	ISM	ENSMUSG00000037300.20	ENST00000366661.9	2911	23	26232	428	26212	-428	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGACGTTCCCGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	125422491	125398902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374
ENSMUSG00000037300.20_125400396_125436712_1	chr8	-	1943	18	ISM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	12005	2324	11991	-1921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCTGGGCTGGCGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	125436712	125400395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641
ENSMUSG00000037300.20_125401101_125439431_1	chr8	-	1940	18	ISM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	9286	3029	9272	-2626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGATGTCCCGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	125439431	125401100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355
ENSMUSG00000037300.20_125401960_125441022_1	chr8	-	1956	18	ISM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	7695	3888	7681	-3485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTTGGCTTTGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	125441022	125401959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927
ENSMUSG00000037300.20_125403079_125448510_1	chr8	-	1855	18	ISM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	207	5007	193	-4604	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCGCTCCAGTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	125448510	125403078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ENSMUSG00000037300.20_125403140_125448566_1	chr8	-	1850	18	ISM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	151	5068	137	-4665	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTCAAAGATCAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	125448566	125403139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ENSMUSG00000037300.20_125403168_125448703_1	chr8	-	1959	18	ISM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	14	5096	0	-4693	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGTTCACCGTGAACACC	NA	NA	NA	NA	NA	NA	NA	NA	125448703	125403167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ENSMUSG00000037300.20_125415624_125448589_1	chr8	-	781	8	ISM	ENSMUSG00000037300.20	ENSMUST00000118134.3	3148	21	133	17550	114	-17149	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCAGGAGGCCCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	125448589	125415623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ENSMUSG00000037313.17_33815978_33825514_1	chr5	+	1338	9	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	48	4028	48	-4028	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCTTCCTGCTGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	33815977	33825514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477
ENSMUSG00000037313.17_33818563_33826082_1	chr5	+	1389	9	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	2633	3460	2633	-3460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGTACAGGCACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	33818562	33826082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005
ENSMUSG00000037313.17_33818682_33826846_1	chr5	+	1339	11	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	2752	2696	2752	-2696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAATAGCTGAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	33818681	33826846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821
ENSMUSG00000037313.17_33818900_33826904_1	chr5	+	1315	10	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	2970	2638	2970	-2638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACCTGAACTCCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	33818899	33826904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821
ENSMUSG00000037313.17_33821165_33828854_1	chr5	+	1419	10	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	5235	688	5235	-688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACCAGATACCCATC	NA	NA	NA	NA	NA	NA	NA	NA	33821164	33828854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747
ENSMUSG00000037313.17_33821609_33828854_1	chr5	+	1339	9	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	5679	688	5679	-688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACCAGATACCCATC	NA	NA	NA	NA	NA	NA	NA	NA	33821608	33828854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747
ENSMUSG00000037313.17_33821749_33829129_1	chr5	+	1320	10	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	5819	413	5819	-413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGACACAGAGACCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	33821748	33829129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008
ENSMUSG00000037313.17_33821856_33829405_1	chr5	+	1293	11	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	5926	137	5926	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCAGCGCTCTTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	33821855	33829405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ENSMUSG00000037313.17_33821856_33829420_1	chr5	+	1308	11	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	5926	122	5926	-122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCTACCCATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	33821855	33829420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ENSMUSG00000037313.17_33821907_33829545_1	chr5	+	1382	11	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	5977	-3	5977	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGTCCTGTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	33821906	33829545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ENSMUSG00000037313.17_33821989_33829545_1	chr5	+	1300	11	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	6059	-3	6059	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGTCCTGTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	33821988	33829545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ENSMUSG00000037315.16_20365697_20384662_1	chrX	+	2280	5	ISM	ENSMUSG00000037315.16	ENSMUST00000043693.7	2472	10	38931	-527	38931	527	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGTTCTTGTAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	20365696	20384662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ENSMUSG00000037315.16_20377326_20385004_1	chrX	+	2302	3	ISM	ENSMUSG00000037315.16	ENSMUST00000043693.7	2472	10	50560	-869	50560	869	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTTAAGTATTCTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	20377325	20385004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20377730_20378974_20379093_20383224
ENSMUSG00000037315.16_20377419_20385094_1	chrX	+	2299	3	ISM	ENSMUSG00000037315.16	ENSMUST00000043693.7	2472	10	50653	-959	50653	959	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTTTTTATGAATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	20377418	20385094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20377730_20378974_20379093_20383224
ENSMUSG00000037315.16_20377649_20385323_1	chrX	+	2298	3	ISM	ENSMUSG00000037315.16	ENSMUST00000043693.7	2472	10	50883	-1188	50883	-851	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCTTAGCCTTAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	20377648	20385323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20377730_20378974_20379093_20383224
ENSMUSG00000037316.10_26254798_26259388_1	chr8	-	3719	2	ISM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	15927	232	15927	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGCAACATTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	26259388	26254797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26258438_26259309
ENSMUSG00000037316.10_26254879_26259451_1	chr8	-	3701	2	ISM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	15864	313	15864	-313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGATATTCAGGATAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	26259451	26254878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26258438_26259309
ENSMUSG00000037316.10_26255025_26261141_1	chr8	-	3703	3	ISM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	14174	459	14174	-459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTATCTCCTGGCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	26261141	26255024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26258438_26259309_26259565_26261106
ENSMUSG00000037316.10_26255172_26261303_1	chr8	-	3718	3	ISM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	14012	606	14012	-606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCACAACTGAGCGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	26261303	26255171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26258438_26259309_26259565_26261106
ENSMUSG00000037316.10_26255330_26267610_1	chr8	-	3778	4	ISM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	7705	764	7705	-764	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAGCAAGCTAAAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	26267610	26255329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450
ENSMUSG00000037316.10_26255450_26275029_1	chr8	-	3706	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	286	884	286	-884	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGTTGTAAAAATAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	26275029	26255449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ENSMUSG00000037316.10_26255501_26275082_1	chr8	-	3708	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	233	935	233	-935	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATACCTTAAGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	26275082	26255500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ENSMUSG00000037316.10_26255550_26275226_1	chr8	-	3803	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	89	984	89	-984	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCATTGGTGTGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	26275226	26255549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ENSMUSG00000037325.11_36627713_36659867_1	chr3	-	1504	14	ISM	ENSMUSG00000037325.11	ENST00000264499.9	2060	17	4912	90	4912	-90	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACCCATGCTCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	36659867	36627712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36627772_36629442_36629567_36629693_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648699_36652406_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832
ENSMUSG00000037325.11_36629496_36661742_1	chr3	-	1503	14	ISM	ENSMUSG00000037325.11	ENST00000506636.1	1923	16	3037	65	3037	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATCTACAAGAGGAATACA	NA	NA	NA	NA	NA	NA	NA	NA	36661742	36629495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36629567_36629693_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648699_36652406_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669
ENSMUSG00000037325.11_36629693_36661856_1	chr3	-	1546	13	NNC	ENSMUSG00000037325.11	novel	1923	16	NA	NA	2923	-262	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	254	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTGTGTCAGTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	36661856	36629692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648699_36652406_36652518_36653487_36653573_36656977_36657109_36658555_36658672_36659832_36659906_36661669
ENSMUSG00000037325.11_36629751_36664363_1	chr3	-	1524	14	ISM	ENSMUSG00000037325.11	ENST00000506636.1	1923	16	416	320	416	-320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGAGTATCAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	36664363	36629750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648699_36652406_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669_36661857_36664328
ENSMUSG00000037325.11_36629926_36664425_1	chr3	-	1500	13	NNC	ENSMUSG00000037325.11	novel	1923	16	NA	NA	354	-495	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAGGAAAATTAATCT	NA	NA	NA	NA	NA	NA	NA	NA	36664425	36629925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_36629997_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648699_36652406_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669_36661857_36664328
ENSMUSG00000037325.11_36632574_36664735_1	chr3	-	1500	13	ISM	ENSMUSG00000037325.11	ENST00000506636.1	1923	16	44	3143	44	-3143	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATACACAACTTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	36664735	36632573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648699_36652406_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669_36661857_36664328_36664505_36664714
ENSMUSG00000037339.18_33758071_33786765_1	chr5	-	1415	6	FSM	ENSMUSG00000037339.18	ENSMUST00000065119.15	2009	6	214	380	201	-371	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACAGCCCCAGTATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	33786765	33758070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786196_33786322_33786680
ENSMUSG00000037339.18_33758183_33786927_1	chr5	-	1465	6	FSM	ENSMUSG00000037339.18	ENSMUST00000065119.15	2009	6	52	492	39	-483	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGATGAGGATGACACCCA	NA	NA	NA	NA	NA	NA	NA	NA	33786927	33758182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786196_33786322_33786680
ENSMUSG00000037343.9_54879295_54891907_1	chr15	-	1126	4	ISM	ENSMUSG00000037343.9	ENSMUST00000041733.9	5031	26	43641	768	43641	-768	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTTACCCTAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	54891907	54879294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713
ENSMUSG00000037344.15_137319667_137320993_1	chr5	-	327	3	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	9948	3	9948	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTCTTGGTGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	137320993	137319666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137319803_137320657_137320833_137320977
ENSMUSG00000037344.15_137319700_137321065_1	chr5	-	366	3	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	9876	36	9876	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCGTCAGGGGGCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	137321065	137319699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137319803_137320657_137320833_137320977
ENSMUSG00000037344.15_137320718_137321331_1	chr5	-	331	3	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	9610	1054	9610	-1054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACCAGCTAAAGAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	137321331	137320717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137320833_137320977_137321171_137321308
ENSMUSG00000037344.15_137320775_137321383_1	chr5	-	326	3	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	9558	1111	9558	-1111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCTGCTGCTCCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	137321383	137320774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137320833_137320977_137321171_137321308
ENSMUSG00000037344.15_137321110_137323840_1	chr5	-	331	4	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	7101	1446	7101	-1446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTTTCTCATTAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	137323840	137321109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137321171_137321308_137321434_137323584_137323668_137323778
ENSMUSG00000037344.15_137321401_137325694_1	chr5	-	336	4	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	5247	1737	5247	-1737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGTGGTCACCGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	137325694	137321400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137321434_137323584_137323668_137323778_137323937_137325632
ENSMUSG00000037344.15_137323878_137326761_1	chr5	-	342	4	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	4180	4214	4180	-4214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATCGGCATCTATGCC	NA	NA	NA	NA	NA	NA	NA	NA	137326761	137323877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137323937_137325632_137325745_137325858_137325967_137326698
ENSMUSG00000037344.15_137323922_137326835_1	chr5	-	372	4	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	4106	4258	4106	-4258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTATGGCTTCTTCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	137326835	137323921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137323937_137325632_137325745_137325858_137325967_137326698
ENSMUSG00000037344.15_137326713_137330809_1	chr5	-	387	2	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	132	7049	132	-7049	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAACTTAGGTGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	137330809	137326712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137327008_137330717
ENSMUSG00000037344.15_137326790_137330836_1	chr5	-	337	2	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	105	7126	105	-7126	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGACCGGGCACCAATGC	NA	NA	NA	NA	NA	NA	NA	NA	137330836	137326789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137327008_137330717
ENSMUSG00000037344.15_137326843_137330895_1	chr5	-	343	2	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	46	7179	46	-7179	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTGCTGGTCAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	137330895	137326842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137327008_137330717
ENSMUSG00000037348.16_134224008_134235371_1	chr4	+	1598	2	FSM	ENSMUSG00000037348.16	ENSMUST00000081525.4	2351	2	0	753	0	-753	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCCTTGCTCAGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	134224007	134235371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_134224348_134234113
ENSMUSG00000037351.10_36738832_36740517_1	chr1	-	722	5	ISM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	8572	1637	8572	-1637	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTGAGACCAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	36740517	36738831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501
ENSMUSG00000037351.10_36738990_36740594_1	chr1	-	641	5	ISM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	8495	1795	8495	-1795	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCTCAACACACACACAG	NA	NA	NA	NA	NA	NA	NA	NA	36740594	36738989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501
ENSMUSG00000037351.10_36739159_36741201_1	chr1	-	751	7	ISM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	7888	1964	7888	-1964	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCCGAGGAGGGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	36741201	36739158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139
ENSMUSG00000037351.10_36740294_36747304_1	chr1	-	766	7	ISM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	1785	3099	1785	-3099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCACAAGTCTGACATGGA	NA	NA	NA	NA	NA	NA	NA	NA	36747304	36740293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271
ENSMUSG00000037351.10_36740565_36749000_1	chr1	-	753	7	ISM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	89	3370	89	-3370	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACGAGGCTCTCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	36749000	36740564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
ENSMUSG00000037353.10_100366988_100375752_1	chr15	+	1125	9	FSM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	84	1293	0	-204	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGCAGTCACCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	100366987	100375752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ENSMUSG00000037353.10_100367026_100375825_1	chr15	+	1160	9	FSM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	122	1220	38	-131	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGGCAGCGGAGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	100367025	100375825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ENSMUSG00000037353.10_100367026_100375956_1	chr15	+	1291	9	FSM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	122	1089	38	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTTTATTGTGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	100367025	100375956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ENSMUSG00000037353.10_100369555_100376121_1	chr15	+	1189	7	ISM	ENSMUSG00000037353.10	ENSMUST00000229648.2	1222	9	2567	-165	2567	165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTCAAGGGATCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	100369554	100376121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ENSMUSG00000037353.10_100369635_100376148_1	chr15	+	1136	7	ISM	ENSMUSG00000037353.10	ENSMUST00000229648.2	1222	9	2647	-192	2647	192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGGGTGCTGCGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	100369634	100376148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ENSMUSG00000037353.10_100370439_100376291_1	chr15	+	1248	6	ISM	ENSMUSG00000037353.10	ENSMUST00000229648.2	1222	9	3451	-335	3451	335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCAAGGAGCCCACGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	100370438	100376291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ENSMUSG00000037353.10_100373053_100376397_1	chr15	+	1131	5	ISM	ENSMUSG00000037353.10	ENSMUST00000229648.2	1222	9	6065	-441	6065	441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTGAGGGCACCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	100373052	100376397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ENSMUSG00000037353.10_100373419_100376579_1	chr15	+	1137	3	ISM	ENSMUSG00000037353.10	ENSMUST00000230294.2	2266	8	6503	465	6431	-465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGTGAGACCAAAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	100373418	100376579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_100373536_100374670_100374768_100375656
ENSMUSG00000037353.10_100373474_100376648_1	chr15	+	1151	3	ISM	ENSMUSG00000037353.10	ENSMUST00000230294.2	2266	8	6558	396	6486	-396	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTCTATGGACACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	100373473	100376648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_100373536_100374670_100374768_100375656
ENSMUSG00000037353.10_100374623_100376776_1	chr15	+	1265	2	ISM	ENSMUSG00000037353.10	ENSMUST00000230294.2	2266	8	7707	268	7635	-268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCCCCTAGGGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	100374622	100376776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_100374768_100375656
ENSMUSG00000037361.9_4867544_4877659_1	chr12	+	1171	4	NNC	ENSMUSG00000037361.9	novel	1180	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTTTCTCTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	4867543	4877659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_4867820_4870593_4870713_4876757_4876897_4877022
ENSMUSG00000037362.9_54609679_54612659_1	chr15	+	490	3	ISM	ENSMUSG00000037362.9	ENST00000259526.4	2146	5	54	4499	54	-4499	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGGTCACCAACAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	54609678	54612659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_54609794_54611158_54611420_54612545
ENSMUSG00000037362.9_54609730_54612719_1	chr15	+	499	3	ISM	ENSMUSG00000037362.9	ENST00000259526.4	2146	5	105	4439	105	-4439	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGCCTTGTGAACAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	54609729	54612719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_54609794_54611158_54611420_54612545
ENSMUSG00000037362.9_54611233_54615708_1	chr15	+	506	3	ISM	ENSMUSG00000037362.9	ENST00000259526.4	2146	5	1608	1450	1608	-1450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGATGGCCGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	54611232	54615708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_54611420_54612545_54612761_54615604
ENSMUSG00000037362.9_54611338_54615828_1	chr15	+	521	3	ISM	ENSMUSG00000037362.9	ENST00000259526.4	2146	5	1713	1330	1713	-1330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAACTGCCCTCAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	54611337	54615828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_54611420_54612545_54612761_54615604
ENSMUSG00000037362.9_54612678_54616013_1	chr15	+	492	2	ISM	ENSMUSG00000037362.9	ENST00000259526.4	2146	5	3053	1145	3053	-1145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCATTTATATTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	54612677	54616013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_54612761_54615604
ENSMUSG00000037362.9_54612733_54616077_1	chr15	+	501	2	ISM	ENSMUSG00000037362.9	ENST00000259526.4	2146	5	3108	1081	3108	-1081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTAAGCTCAGGATATGG	NA	NA	NA	NA	NA	NA	NA	NA	54612732	54616077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_54612761_54615604
ENSMUSG00000037362.9_54615884_54616447_1	chr15	+	511	2	ISM	ENSMUSG00000037362.9	ENST00000259526.4	2146	5	6259	711	6259	-711	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCTCTTGAACATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	54615883	54616447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_54616316_54616368
ENSMUSG00000037362.9_54615943_54616495_1	chr15	+	500	2	ISM	ENSMUSG00000037362.9	ENST00000259526.4	2146	5	6318	663	6318	-663	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGAAATATGCTATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	54615942	54616495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_54616316_54616368
ENSMUSG00000037362.9_54616069_54616612_1	chr15	+	491	2	ISM	ENSMUSG00000037362.9	ENST00000259526.4	2146	5	6444	546	6444	-546	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTCCCAATGCAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	54616068	54616612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_54616316_54616368
ENSMUSG00000037363.10_26071707_26076823_1	chr8	-	417	3	ISM	ENSMUSG00000037363.10	ENST00000297720.9	991	6	9611	-1	9611	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCACCGAATATAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	26076823	26071706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26071803_26075364_26075485_26076622
ENSMUSG00000037363.10_26071707_26086428_1	chr8	-	1130	7	FSM	ENSMUSG00000037363.10	ENST00000523983.6	1135	7	6	-1	6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCACCGAATATAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	26086428	26071706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_26071803_26075364_26075485_26076622_26076824_26077311_26077450_26082467_26082612_26083734_26084115_26086377
ENSMUSG00000037363.10_26075436_26083803_1	chr8	-	457	4	ISM	ENSMUSG00000037363.10	ENST00000297720.9	991	6	2631	3728	2631	1685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTGCCGGGCCCGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	26083803	26075435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26075485_26076622_26076824_26077311_26077450_26083734
ENSMUSG00000037363.10_26076691_26083954_1	chr8	-	491	3	ISM	ENSMUSG00000037363.10	ENST00000297720.9	991	6	2480	4983	2480	430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGGAACAAACAATCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	26083954	26076690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26076824_26077311_26077450_26083734
ENSMUSG00000037363.10_26077440_26086428_1	chr8	-	441	3	ISM	ENSMUSG00000037363.10	ENST00000297720.9	991	6	6	5732	6	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAACGATGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	26086428	26077439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26077450_26083734_26084115_26086377
ENSMUSG00000037364.13_137293987_137300417_1	chr5	-	2177	16	ISM	ENSMUSG00000037364.13	ENSMUST00000040873.12	3024	20	5519	21	5032	-10	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAGTGTGTGTTAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	137300417	137293986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387
ENSMUSG00000037364.13_137293987_137300470_1	chr5	-	2230	16	ISM	ENSMUSG00000037364.13	ENSMUST00000040873.12	3024	20	5466	21	4979	-10	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAGTGTGTGTTAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	137300470	137293986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387
ENSMUSG00000037364.13_137293987_137300862_1	chr5	-	2405	17	ISM	ENSMUSG00000037364.13	ENST00000618262.4	2650	19	4587	-99	4587	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAGTGTGTGTTAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	137300862	137293986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298008_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788
ENSMUSG00000037364.13_137294147_137300576_1	chr5	-	2176	16	ISM	ENSMUSG00000037364.13	ENSMUST00000040873.12	3024	20	5360	181	4873	-61	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATAGTGGAGTATCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	137300576	137294146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387
ENSMUSG00000037364.13_137294280_137300819_1	chr5	-	2154	16	ISM	ENSMUSG00000037364.13	ENSMUST00000040873.12	3024	20	5117	314	4630	-194	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCGGTTATCCTGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	137300819	137294279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788
ENSMUSG00000037364.13_137294280_137301242_1	chr5	-	2334	17	ISM	ENSMUSG00000037364.13	ENST00000618262.4	2650	19	4207	194	4207	-194	internal_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCGGTTATCCTGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	137301242	137294279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298008_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173
ENSMUSG00000037364.13_137294498_137305326_1	chr5	-	2299	17	ISM	ENSMUSG00000037364.13	ENST00000618262.4	2650	19	123	412	123	-412	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTGGGCTATGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	137305326	137294497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298008_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307
ENSMUSG00000037364.13_137294729_137305451_1	chr5	-	2350	16	NNC	ENSMUSG00000037364.13	novel	2650	19	NA	NA	-2	-643	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATACGATCTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	137305451	137294728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298010_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307
ENSMUSG00000037364.13_137294839_137305361_1	chr5	-	2145	16	ISM	ENSMUSG00000037364.13	ENSMUST00000197466.5	2972	20	567	862	88	-753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCGAGGAGGTGAAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	137305361	137294838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307
ENSMUSG00000037364.13_137295189_137305741_1	chr5	-	2088	16	ISM	ENSMUSG00000037364.13	ENSMUST00000197466.5	2972	20	187	1212	187	-1103	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGTGTGCGTGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	137305741	137295188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ENSMUSG00000037364.13_137295384_137305902_1	chr5	-	2164	15	ISM	ENSMUSG00000037364.13	ENSMUST00000197466.5	2972	20	26	1407	26	-1298	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGGGGGCCCATGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	137305902	137295383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ENSMUSG00000037366.15_134130281_134149843_1	chr4	+	1117	9	FSM	ENSMUSG00000037366.15	ENST00000374284.5	1150	9	35	-2	35	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAGACAAGTGGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	134130280	134149843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_134130416_134131403_134131549_134132316_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688
ENSMUSG00000037366.15_134130281_134149843_2	chr4	+	1112	9	NNC	ENSMUSG00000037366.15	novel	2248	11	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAGACAAGTGGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	134130280	134149843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_134130416_134131408_134131549_134132316_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688
ENSMUSG00000037369.18_18028882_18117190_1	chrX	+	1898	14	ISM	ENSMUSG00000037369.18	ENST00000543216.6	5528	27	0	28900	0	-28900	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATAGGCAATAATCATG	NA	NA	NA	NA	NA	NA	NA	NA	18028881	18117190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18116945
ENSMUSG00000037369.18_18029048_18117339_1	chrX	+	1881	14	ISM	ENSMUSG00000037369.18	ENST00000543216.6	5528	27	166	28751	166	-28751	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAACAAGACTAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	18029047	18117339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18116945
ENSMUSG00000037369.18_18029097_18117339_1	chrX	+	1832	14	ISM	ENSMUSG00000037369.18	ENST00000543216.6	5528	27	215	28751	215	-28751	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAACAAGACTAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	18029096	18117339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18116945
ENSMUSG00000037369.18_18029228_18120335_1	chrX	+	1796	15	ISM	ENSMUSG00000037369.18	ENST00000543216.6	5528	27	346	25755	346	-25755	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCTGGTATTCAGAATCA	NA	NA	NA	NA	NA	NA	NA	NA	18029227	18120335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18116945_18117342_18120242
ENSMUSG00000037369.18_18029294_18120407_1	chrX	+	1802	15	ISM	ENSMUSG00000037369.18	ENST00000543216.6	5528	27	412	25683	412	-25683	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACCTCTCCTCTCACAC	NA	NA	NA	NA	NA	NA	NA	NA	18029293	18120407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18116945_18117342_18120242
ENSMUSG00000037369.18_18029298_18116066_1	chrX	+	1312	14	ISM	ENSMUSG00000037369.18	ENST00000536777.6	5630	28	416	30024	416	-30024	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTGTCTTAATGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	18029297	18116066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991
ENSMUSG00000037369.18_18029353_18120471_1	chrX	+	1807	15	ISM	ENSMUSG00000037369.18	ENST00000543216.6	5528	27	471	25619	471	-25619	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGCCTTCAGGAAACACA	NA	NA	NA	NA	NA	NA	NA	NA	18029352	18120471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18116945_18117342_18120242
ENSMUSG00000037369.18_18065395_18117067_1	chrX	+	1285	13	ISM	ENSMUSG00000037369.18	ENST00000536777.6	5630	28	36513	29023	36513	-29023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGTCTCTCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	18065394	18117067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991_18116094_18116945
ENSMUSG00000037369.18_18065406_18120592_1	chrX	+	1796	13	ISM	ENSMUSG00000037369.18	ENST00000543216.6	5528	27	36524	25498	36524	-25498	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCAGTCCTAGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	18065405	18120592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18116945_18117342_18120242
ENSMUSG00000037369.18_18088995_18117342_1	chrX	+	1341	10	ISM	ENSMUSG00000037369.18	ENST00000536777.6	5630	28	60113	28748	60113	-28748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAAGACTAGCTGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	18088994	18117342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991_18116094_18116945
ENSMUSG00000037369.18_18089083_18120887_1	chrX	+	1795	10	ISM	ENSMUSG00000037369.18	ENST00000543216.6	5528	27	60201	25203	60201	-25203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAATGGAAGAATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	18089082	18120887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18116945_18117342_18120242
ENSMUSG00000037369.18_18100097_18120326_1	chrX	+	1304	10	ISM	ENSMUSG00000037369.18	ENST00000536777.6	5630	28	71215	25764	71215	-25764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCAGCTGGCTCTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	18100096	18120326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991_18116094_18116945_18117342_18120242
ENSMUSG00000037369.18_18102900_18121022_1	chrX	+	1841	8	ISM	ENSMUSG00000037369.18	ENST00000543216.6	5528	27	74018	25068	74018	-25068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTGTGGCAAAATTAATC	NA	NA	NA	NA	NA	NA	NA	NA	18102899	18121022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18116945_18117342_18120242
ENSMUSG00000037369.18_18105129_18124162_1	chrX	+	1844	8	ISM	ENSMUSG00000037369.18	ENST00000543216.6	5528	27	76247	21928	76247	-21928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCCAAAGGACAAGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	18105128	18124162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18116945_18117342_18120242_18121022_18124074
ENSMUSG00000037369.18_18107949_18120476_1	chrX	+	1260	7	ISM	ENSMUSG00000037369.18	ENST00000536777.6	5630	28	79067	25614	79067	-25614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCAGGAAACACATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	18107948	18120476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991_18116094_18116945_18117342_18120242
ENSMUSG00000037369.18_18108022_18127796_1	chrX	+	1795	8	ISM	ENSMUSG00000037369.18	ENST00000543216.6	5528	27	79140	18294	79140	-18294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCAATTTTGTACAAACC	NA	NA	NA	NA	NA	NA	NA	NA	18108021	18127796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18116945_18117342_18120242_18121022_18124074_18124205_18127761
ENSMUSG00000037369.18_18108035_18120605_1	chrX	+	1303	7	ISM	ENSMUSG00000037369.18	ENST00000536777.6	5630	28	79153	25485	79153	-25485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATGGAGATTCTAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	18108034	18120605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991_18116094_18116945_18117342_18120242
ENSMUSG00000037369.18_18112512_18120750_1	chrX	+	1240	5	ISM	ENSMUSG00000037369.18	ENST00000536777.6	5630	28	83630	25340	83630	-25340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATAATTCTGTTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	18112511	18120750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18112656_18114508_18114599_18115991_18116094_18116945_18117342_18120242
ENSMUSG00000037369.18_18112535_18120821_1	chrX	+	1288	5	ISM	ENSMUSG00000037369.18	ENST00000536777.6	5630	28	83653	25269	83653	-25269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGACAACCACAAACAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	18112534	18120821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18112656_18114508_18114599_18115991_18116094_18116945_18117342_18120242
ENSMUSG00000037369.18_18112535_18120875_1	chrX	+	1342	5	ISM	ENSMUSG00000037369.18	ENST00000536777.6	5630	28	83653	25215	83653	-25215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATTAATGGAGAAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	18112534	18120875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18112656_18114508_18114599_18115991_18116094_18116945_18117342_18120242
ENSMUSG00000037369.18_18112535_18130216_1	chrX	+	1858	8	ISM	ENSMUSG00000037369.18	ENST00000543216.6	5528	27	83653	15874	83653	-15874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCACTCAGACAGTGAATC	NA	NA	NA	NA	NA	NA	NA	NA	18112534	18130216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18112656_18114508_18114599_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186
ENSMUSG00000037369.18_18113247_18120952_1	chrX	+	1556	6	ISM	ENSMUSG00000037369.18	ENST00000611820.5	6103	30	84365	25320	84365	-25138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTCAGATCATACCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	18113246	18120952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242
ENSMUSG00000037369.18_18114506_18130401_1	chrX	+	1852	8	ISM	ENSMUSG00000037369.18	ENST00000543216.6	5528	27	85624	15689	85624	-15689	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCTTGTGATAGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	18114505	18130401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18114599_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324
ENSMUSG00000037369.18_18116943_18130836_1	chrX	+	1796	8	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	88061	15254	88061	-15254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTCGTGAGAGTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	18116942	18130836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800
ENSMUSG00000037369.18_18117055_18135497_1	chrX	+	1908	9	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	88173	10593	88173	-10593	internal_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTAGGTTCCCATACTA	NA	NA	NA	NA	NA	NA	NA	NA	18117054	18135497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386
ENSMUSG00000037369.18_18117199_18138148_1	chrX	+	1833	10	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	88317	7942	88317	-7942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTGTATAGGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	18117198	18138148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083
ENSMUSG00000037369.18_18117267_18138190_1	chrX	+	1807	10	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	88385	7900	88385	-7900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAAATGCTGGCACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	18117266	18138190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083
ENSMUSG00000037369.18_18120352_18139279_1	chrX	+	1797	10	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	91470	6811	91470	-6811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCACGAAATATCAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	18120351	18139279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186
ENSMUSG00000037369.18_18120456_18141343_1	chrX	+	1812	11	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	91574	4747	91574	-4747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATATGGCACGGGCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	18120455	18141343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273
ENSMUSG00000037369.18_18120617_18143709_1	chrX	+	1803	12	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	91735	2381	91735	-2381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTGGAAAATTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	18120616	18143709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614
ENSMUSG00000037369.18_18120770_18144933_1	chrX	+	1795	13	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	91888	1157	91888	-1157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAGAAAGTAACCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	18120769	18144933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ENSMUSG00000037369.18_18120830_18144990_1	chrX	+	1792	13	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	91948	1100	91948	-1100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTGAAAACTGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	18120829	18144990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ENSMUSG00000037369.18_18120891_18145121_1	chrX	+	1862	13	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	92009	969	92009	-969	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACCACGTTTTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	18120890	18145121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ENSMUSG00000037369.18_18128593_18145121_1	chrX	+	1371	10	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	99711	969	99711	-969	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACCACGTTTTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	18128592	18145121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ENSMUSG00000037369.18_18130820_18145261_1	chrX	+	1270	7	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	101938	829	101938	-829	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGGGGGGGAAAATAACTAG	NA	NA	NA	NA	NA	NA	NA	NA	18130819	18145261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ENSMUSG00000037369.18_18130850_18145819_1	chrX	+	1798	7	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	101968	271	101968	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATCTGATTATATATAT	NA	NA	NA	NA	NA	NA	NA	NA	18130849	18145819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ENSMUSG00000037369.18_18130870_18145345_1	chrX	+	1304	7	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	101988	745	101988	-745	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAATGTGAAAAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	18130869	18145345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ENSMUSG00000037369.18_18135424_18145965_1	chrX	+	1807	6	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	106542	125	106542	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGTATTGCTCACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	18135423	18145965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ENSMUSG00000037369.18_18135465_18146032_1	chrX	+	1833	6	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	106583	58	106583	-58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGTCAGACTGGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	18135464	18146032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ENSMUSG00000037369.18_18138084_18146175_1	chrX	+	1939	5	ISM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	109270	0	109202	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGACTCATCATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	18138083	18146175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ENSMUSG00000037369.18_18143709_18146054_1	chrX	+	1267	2	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	114827	36	114827	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAATTGCAACTACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	18143708	18146054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_18143786_18144864
ENSMUSG00000037370.14_24517118_24521265_1	chr10	-	847	2	ISM	ENSMUSG00000037370.14	ENST00000647893.1	2843	24	66626	-460	66624	460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGGATATCTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	24521265	24517117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_24517875_24521175
ENSMUSG00000037370.14_24517511_24525226_1	chr10	-	826	5	ISM	ENSMUSG00000037370.14	ENST00000647893.1	2843	24	62665	-67	62663	67	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTCCTGTGCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	24525226	24517510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_24517875_24521175_24521339_24523050_24523184_24523914_24523996_24525141
ENSMUSG00000037370.14_24517578_24537875_1	chr10	-	1733	13	ISM	ENSMUSG00000037370.14	ENST00000647893.1	2843	24	50016	0	50014	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGACTCCCTGTGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24537875	24517577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_24517875_24521175_24521339_24523050_24523184_24523914_24523996_24525141_24525272_24527142_24527295_24528732_24528785_24529800_24529968_24530785_24530874_24531700_24531771_24533002_24533131_24536018_24536180_24537764
ENSMUSG00000037370.14_24521176_24544983_1	chr10	-	1650	15	ISM	ENSMUSG00000037370.14	ENST00000647893.1	2843	24	42908	3598	42906	-3472	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAACAGCCTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	24544983	24521175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_24521339_24523050_24523184_24523914_24523996_24525141_24525272_24527142_24527295_24528732_24528785_24529800_24529968_24530785_24530874_24531700_24531771_24533002_24533131_24536018_24536180_24537764_24537874_24540452_24540526_24540808_24540875_24544906
ENSMUSG00000037373.13_33405605_33407787_1	chr5	-	742	4	ISM	ENSMUSG00000037373.13	ENSMUST00000202868.4	2436	10	24549	507	24538	-236	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTATCACGAATGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	33407787	33405604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33406028_33406450_33406569_33406930_33407059_33407714
ENSMUSG00000037373.13_33405825_33408286_1	chr5	-	665	5	ISM	ENSMUSG00000037373.13	ENSMUST00000202868.4	2436	10	24050	727	24039	-456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGCACCTGGTGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	33408286	33405824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33406028_33406450_33406569_33406930_33407059_33407714_33407846_33408201
ENSMUSG00000037373.13_33405883_33408330_1	chr5	-	651	5	ISM	ENSMUSG00000037373.13	ENSMUST00000202868.4	2436	10	24006	785	23995	-514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGGCGGATAGAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	33408330	33405882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33406028_33406450_33406569_33406930_33407059_33407714_33407846_33408201
ENSMUSG00000037373.13_33405981_33408355_1	chr5	-	578	5	ISM	ENSMUSG00000037373.13	ENSMUST00000202868.4	2436	10	23981	883	23970	-612	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGAAGGGATTGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	33408355	33405980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33406028_33406450_33406569_33406930_33407059_33407714_33407846_33408201
ENSMUSG00000037373.13_33406509_33416599_1	chr5	-	652	5	ISM	ENSMUSG00000037373.13	ENSMUST00000201575.4	2091	8	15737	1411	15726	-1140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGCCAGCATGGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	33416599	33406508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481
ENSMUSG00000037373.13_33406982_33418391_1	chr5	-	669	5	ISM	ENSMUSG00000037373.13	ENSMUST00000201575.4	2091	8	13945	1884	13934	-1613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTGAGATGAGAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	33418391	33406981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352
ENSMUSG00000037373.13_33407727_33424278_1	chr5	-	738	5	ISM	ENSMUSG00000037373.13	ENSMUST00000202962.4	3595	7	8047	2358	8047	-2358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCCTTCAGGTGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	33424278	33407726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226
ENSMUSG00000037373.13_33408202_33432141_1	chr5	-	741	5	ISM	ENSMUSG00000037373.13	ENSMUST00000079746.10	2279	9	197	3135	184	-2833	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGCTGCAGCTTCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	33432141	33408201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33432122
ENSMUSG00000037373.13_33408332_33432194_1	chr5	-	664	5	ISM	ENSMUSG00000037373.13	ENSMUST00000079746.10	2279	9	144	3265	131	-2963	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCGGGCCCTGGGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	33432194	33408331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33432122
ENSMUSG00000037373.13_33416480_33426832_1	chr5	-	556	4	ISM	ENSMUSG00000037373.13	ENSMUST00000202962.4	3595	7	5493	11111	5493	-11111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTTGGCCACTGTGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	33426832	33416479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33416689_33418352_33418498_33424226_33424382_33426785
ENSMUSG00000037375.17_192194474_192277399_1	chr1	-	517	4	ISM	ENSMUSG00000037375.17	ENST00000367009.2	699	6	98861	-5	98861	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAACCTATCCCCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	192277399	192194473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_192194558_192196200_192196284_192235246_192235392_192277194
ENSMUSG00000037375.17_192194474_192423933_1	chr1	-	984	7	NNC	ENSMUSG00000037375.17	novel	1145	10	NA	NA	7325	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAACCTATCCCCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	192423933	192194473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_192194558_192196200_192196284_192235246_192235392_192277194_192277397_192376075_192376258_192399264_192399437_192423817
ENSMUSG00000037375.17_192194474_192423933_2	chr1	-	986	8	NNC	ENSMUSG00000037375.17	novel	1145	10	NA	NA	7325	5	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAACCTATCCCCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	192423933	192194473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_192194558_192196200_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376109_192376258_192399264_192399437_192423817
ENSMUSG00000037375.17_192194474_192431258_1	chr1	-	1059	9	NNC	ENSMUSG00000037375.17	novel	1481	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAACCTATCCCCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	192431258	192194473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_192194560_192196200_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192423817_192423932_192431188
ENSMUSG00000037375.17_192194474_192431258_2	chr1	-	1057	9	ISM	ENSMUSG00000037375.17	ENST00000541565.5	1145	10	10815	-5	0	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAACCTATCCCCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	192431258	192194473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_192194558_192196200_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192423817_192423932_192431188
ENSMUSG00000037375.17_192194474_192431258_3	chr1	-	1043	8	NNC	ENSMUSG00000037375.17	novel	1481	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAACCTATCCCCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	192431258	192194473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_192194558_192196200_192196284_192235246_192235392_192277194_192277397_192376084_192376258_192399264_192399437_192423817_192423932_192431188
ENSMUSG00000037375.17_192194474_192431258_4	chr1	-	1051	9	NNC	ENSMUSG00000037375.17	novel	1481	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAACCTATCCCCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	192431258	192194473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_192194558_192196200_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399431_192423817_192423932_192431188
ENSMUSG00000037375.17_192194474_192442065_1	chr1	-	1142	10	FSM	ENSMUSG00000037375.17	ENST00000541565.5	1145	10	8	-5	8	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAACCTATCCCCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	192442065	192194473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_192194558_192196200_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192423817_192423932_192431188_192431257_192441978
ENSMUSG00000037375.17_192235332_192408516_1	chr1	-	710	6	ISM	ENSMUSG00000037375.17	ENST00000545154.5	1481	11	22742	40853	22742	-40196	internal_fragment	TRUE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCATGCTCATCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	192408516	192235331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192408427
ENSMUSG00000037375.17_192277353_192409659_1	chr1	-	705	6	ISM	ENSMUSG00000037375.17	ENST00000545154.5	1481	11	21599	82874	21599	-82217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACTGCTTTCTACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	192409659	192277352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192408427_192408662_192409591
ENSMUSG00000037375.17_192376201_192423862_1	chr1	-	703	5	ISM	ENSMUSG00000037375.17	ENST00000545154.5	1481	11	7396	181722	7396	-181065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCCGGCTCTGCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	192423862	192376200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_192376258_192399264_192399437_192408427_192408662_192409591_192409787_192423817
ENSMUSG00000037375.17_192399329_192431222_1	chr1	-	685	5	ISM	ENSMUSG00000037375.17	ENST00000545154.5	1481	11	36	204850	36	-204193	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACATGCATGCCCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	192431222	192399328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_192399437_192408427_192408662_192409591_192409787_192423817_192423932_192431188
ENSMUSG00000037376.15_132646404_132648719_1	chr2	-	1218	2	ISM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	9255	277	9255	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCTTAACCATCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	132648719	132646403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_132647533_132648630
ENSMUSG00000037376.15_132646613_132650200_1	chr2	-	1187	4	ISM	ENSMUSG00000037376.15	ENST00000453074.6	2058	10	7777	-177	7774	177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTACTACCTGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	132650200	132646612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123
ENSMUSG00000037376.15_132646790_132650936_1	chr2	-	1375	5	ISM	ENSMUSG00000037376.15	ENST00000453074.6	2058	10	7041	0	7038	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGGGTGCTCCTTTGCG	NA	NA	NA	NA	NA	NA	NA	NA	132650936	132646789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580
ENSMUSG00000037376.15_132646934_132651873_1	chr2	-	1356	6	ISM	ENSMUSG00000037376.15	ENST00000453074.6	2058	10	6104	144	6101	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGTACCAAAACGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	132651873	132646933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748
ENSMUSG00000037376.15_132647220_132654006_1	chr2	-	1285	9	ISM	ENSMUSG00000037376.15	ENST00000453074.6	2058	10	3971	430	3968	-430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTTTCGTTTGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	132654006	132647219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132653967
ENSMUSG00000037376.15_132647348_132657743_1	chr2	-	1266	10	FSM	ENSMUSG00000037376.15	ENST00000453074.6	2058	10	234	558	231	-558	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTAACTCTTAGGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	132657743	132647347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132653967_132654096_132657723
ENSMUSG00000037376.15_132647393_132657800_1	chr2	-	1278	10	FSM	ENSMUSG00000037376.15	ENST00000453074.6	2058	10	177	603	174	-603	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGAGCCAGCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	132657800	132647392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132653967_132654096_132657723
ENSMUSG00000037376.15_132647447_132654020_1	chr2	-	1182	10	ISM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	3954	1320	3954	-657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCGGGCAGACCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	132654020	132647446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967
ENSMUSG00000037376.15_132647448_132657933_1	chr2	-	1356	10	FSM	ENSMUSG00000037376.15	ENST00000453074.6	2058	10	44	658	41	-658	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCGGGCAGACCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	132657933	132647447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132653967_132654096_132657723
ENSMUSG00000037376.15_132648858_132657821_1	chr2	-	1141	9	ISM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	153	2731	153	-2068	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGTCAAGGCCGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	132657821	132648857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ENSMUSG00000037379.8_33371829_33373708_1	chr5	-	375	3	ISM	ENSMUSG00000037379.8	ENSMUST00000046186.8	2045	6	2091	558	2091	-558	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATAACTGCGTCTAAACC	NA	NA	NA	NA	NA	NA	NA	NA	33373708	33371828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33371997_33372892_33373068_33373676
ENSMUSG00000037379.8_33371885_33373757_1	chr5	-	368	3	ISM	ENSMUSG00000037379.8	ENSMUST00000046186.8	2045	6	2042	614	2042	-614	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCTAACAATGGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	33373757	33371884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33371997_33372892_33373068_33373676
ENSMUSG00000037379.8_33371936_33373819_1	chr5	-	379	3	ISM	ENSMUSG00000037379.8	ENSMUST00000046186.8	2045	6	1980	665	1980	-665	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGTGGAAAGTTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	33373819	33371935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33371997_33372892_33373068_33373676
ENSMUSG00000037379.8_33372990_33374047_1	chr5	-	377	3	ISM	ENSMUSG00000037379.8	ENSMUST00000046186.8	2045	6	1752	1719	1752	-1719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCTTCGTGCGGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	33374047	33372989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33373068_33373676_33373869_33373940
ENSMUSG00000037379.8_33373773_33374673_1	chr5	-	406	3	ISM	ENSMUSG00000037379.8	ENSMUST00000046186.8	2045	6	1126	2502	1126	-2502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGGATCTTTATCCACA	NA	NA	NA	NA	NA	NA	NA	NA	33374673	33373772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33373869_33373940_33374165_33374587
ENSMUSG00000037379.8_33374020_33375334_1	chr5	-	408	3	ISM	ENSMUSG00000037379.8	ENSMUST00000046186.8	2045	6	465	2749	465	-2749	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTCTCAGCTCCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	33375334	33374019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33374165_33374587_33374808_33375291
ENSMUSG00000037379.8_33374087_33375371_1	chr5	-	378	3	ISM	ENSMUSG00000037379.8	ENSMUST00000046186.8	2045	6	428	2816	428	-2816	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGAGGCCTGGGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	33375371	33374086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33374165_33374587_33374808_33375291
ENSMUSG00000037386.17_39061656_39300941_1	chr15	+	1349	4	ISM	ENSMUSG00000037386.17	ENST00000504942.6	4223	24	38	244255	38	-244219	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCTCAGGGACAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	39061655	39300941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392
ENSMUSG00000037386.17_39155497_39301318_1	chr15	+	1448	3	ISM	ENSMUSG00000037386.17	ENSMUST00000042917.10	4719	27	93739	243842	93739	-243842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCGCTCCTGCCGCACC	NA	NA	NA	NA	NA	NA	NA	NA	39155496	39301318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_39155708_39208705_39209017_39300392
ENSMUSG00000037386.17_39155645_39315493_1	chr15	+	1358	4	ISM	ENSMUSG00000037386.17	ENST00000504942.6	4223	24	94027	229703	93887	-229667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTTTGGTGAGACGTG	NA	NA	NA	NA	NA	NA	NA	NA	39155644	39315493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_39155708_39208705_39209017_39300392_39301319_39315435
ENSMUSG00000037386.17_39208704_39317873_1	chr15	+	1425	4	ISM	ENSMUSG00000037386.17	ENST00000504942.6	4223	24	147086	227323	146946	-227287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTATGTAATAAACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	39208703	39317873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_39209017_39300392_39301319_39315435_39315504_39317755
ENSMUSG00000037386.17_39208868_39321182_1	chr15	+	1386	6	ISM	ENSMUSG00000037386.17	ENST00000504942.6	4223	24	147250	224014	147110	-223978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGCTATTGCAAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	39208867	39321182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159
ENSMUSG00000037386.17_39208929_39321248_1	chr15	+	1391	6	ISM	ENSMUSG00000037386.17	ENST00000504942.6	4223	24	147311	223948	147171	-223912	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAAGTTGAGCTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	39208928	39321248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159
ENSMUSG00000037386.17_39300496_39325964_1	chr15	+	1353	7	ISM	ENSMUSG00000037386.17	ENST00000504942.6	4223	24	238878	219232	-222466	-219196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGAGGGATGTCCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	39300495	39325964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893
ENSMUSG00000037386.17_39300634_39339798_1	chr15	+	1459	10	ISM	ENSMUSG00000037386.17	ENST00000504942.6	4223	24	239016	205398	-222328	-205362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGTCAAGAAAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	39300633	39339798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39332550_39332599_39335729_39335861_39339775
ENSMUSG00000037386.17_39300786_39339854_1	chr15	+	1363	10	ISM	ENSMUSG00000037386.17	ENST00000504942.6	4223	24	239168	205342	-222176	-205306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCACCGAAGAGAATTCCG	NA	NA	NA	NA	NA	NA	NA	NA	39300785	39339854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39332550_39332599_39335729_39335861_39339775
ENSMUSG00000037386.17_39300921_39342012_1	chr15	+	1381	11	ISM	ENSMUSG00000037386.17	ENST00000504942.6	4223	24	239303	203184	-222041	-203148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGATGTCTCCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	39300920	39342012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39332550_39332599_39335729_39335861_39339775_39339948_39341952
ENSMUSG00000037386.17_39301143_39373083_1	chr15	+	1365	13	ISM	ENSMUSG00000037386.17	ENST00000504942.6	4223	24	239525	172113	-221819	-172077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGCCAGAACAAGTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	39301142	39373083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39332550_39332599_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040
ENSMUSG00000037386.17_39301229_39373136_1	chr15	+	1332	13	ISM	ENSMUSG00000037386.17	ENST00000504942.6	4223	24	239611	172060	-221733	-172024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGAGTAGATGTTATAGGA	NA	NA	NA	NA	NA	NA	NA	NA	39301228	39373136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39332550_39332599_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040
ENSMUSG00000037386.17_39315461_39374771_1	chr15	+	1393	13	ISM	ENSMUSG00000037386.17	ENST00000504942.6	4223	24	253843	170425	-207501	-170389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGCAATTAAGCCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	39315460	39374771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39332550_39332599_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374656
ENSMUSG00000037386.17_39317797_39398295_1	chr15	+	1370	13	ISM	ENSMUSG00000037386.17	ENST00000504942.6	4223	24	256179	146901	-205165	-146865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAGAGCGGACCACCACC	NA	NA	NA	NA	NA	NA	NA	NA	39317796	39398295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39332550_39332599_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374656_39374771_39398233
ENSMUSG00000037386.17_39320105_39398402_1	chr15	+	1367	12	ISM	ENSMUSG00000037386.17	ENST00000504942.6	4223	24	258487	146794	-202857	-146758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTATCGAGGTGAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	39320104	39398402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39332550_39332599_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374656_39374771_39398233
ENSMUSG00000037386.17_39321176_39399352_1	chr15	+	1378	12	ISM	ENSMUSG00000037386.17	ENST00000504942.6	4223	24	259558	145844	-201786	-145808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCAAAGGGAACATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	39321175	39399352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_39321284_39322984_39323032_39325893_39326007_39332550_39332599_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374656_39374771_39398233_39398414_39399267
ENSMUSG00000037386.17_39325908_39538461_1	chr15	+	1360	11	ISM	ENSMUSG00000037386.17	ENST00000504942.6	4223	24	264290	6735	-197054	-6699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGCTCGGAAGGAAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	39325907	39538461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_39326007_39332550_39332599_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374656_39374771_39398233_39398414_39399267_39399378_39538335
ENSMUSG00000037386.17_39335780_39543100_1	chr15	+	1364	11	NIC	ENSMUSG00000037386.17	novel	4760	26	NA	NA	-187182	-2060	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACCAGGTTCCAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	39335779	39543100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_+_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39538335_39538478_39542643_39542757_39543025
ENSMUSG00000037386.17_39339871_39544972_1	chr15	+	1386	12	NIC	ENSMUSG00000037386.17	novel	4760	26	NA	NA	-183091	-188	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACAAATCCTTTATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	39339870	39544972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_+_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ENSMUSG00000037386.17_39341986_39545160_1	chr15	+	1464	11	NIC	ENSMUSG00000037386.17	novel	4719	27	NA	NA	-180976	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTATAAAACTGTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	39341985	39545160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_+_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ENSMUSG00000037386.17_39342045_39545160_1	chr15	+	1405	11	NIC	ENSMUSG00000037386.17	novel	4719	27	NA	NA	-180917	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTATAAAACTGTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	39342044	39545160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_+_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ENSMUSG00000037419.10_14268164_14292279_1	chr9	-	1333	2	FSM	ENSMUSG00000037419.10	ENSMUST00000167549.2	4470	2	259	2878	0	-2878	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTGTGTATACTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	14292279	14268163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_14269184_14291966
ENSMUSG00000037426.19_33021931_33061680_1	chr5	+	1198	15	ISM	ENSMUSG00000037426.19	ENSMUST00000049780.13	3569	33	866	51964	0	-51964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAGAATTTAGATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	33021930	33061680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618
ENSMUSG00000037426.19_33021931_33153762_1	chr5	+	1727	20	NNC	ENSMUSG00000037426.19	novel	1727	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTGCCACCACCTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	33021930	33153762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075524_33153706
ENSMUSG00000037426.19_33021931_33153762_2	chr5	+	1722	20	NNC	ENSMUSG00000037426.19	novel	1727	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTGCCACCACCTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	33021930	33153762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075524_33153711
ENSMUSG00000037426.19_33021931_33153762_3	chr5	+	1722	20	NNC	ENSMUSG00000037426.19	novel	1727	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1348	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTGCCACCACCTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	33021930	33153762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33035976_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075524_33153706
ENSMUSG00000037426.19_33025317_33061876_1	chr5	+	1160	15	ISM	ENSMUSG00000037426.19	ENSMUST00000049780.13	3569	33	4252	51768	3386	-51768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTATGAGCGTAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	33025316	33061876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802
ENSMUSG00000037426.19_33026162_33067870_1	chr5	+	1144	15	ISM	ENSMUSG00000037426.19	ENSMUST00000049780.13	3569	33	5097	45774	4231	-45774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTCCCCAGTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	33026161	33067870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800
ENSMUSG00000037426.19_33032684_33070500_1	chr5	+	1130	16	ISM	ENSMUSG00000037426.19	ENSMUST00000049780.13	3569	33	11619	43144	10753	-43144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACGATGCTCAAGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	33032683	33070500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443
ENSMUSG00000037426.19_33034412_33070564_1	chr5	+	1168	15	ISM	ENSMUSG00000037426.19	ENSMUST00000049780.13	3569	33	13347	43080	12481	-43080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTCTCAGATTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	33034411	33070564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443
ENSMUSG00000037426.19_33056351_33081659_1	chr5	+	1111	11	ISM	ENSMUSG00000037426.19	ENSMUST00000049780.13	3569	33	35286	31985	34420	-31985	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAAGCTCACCTCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	33056350	33081659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505
ENSMUSG00000037426.19_33059209_33094925_1	chr5	+	1091	11	ISM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	37278	54048	37278	-18719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTCTTACTACTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	33059208	33094925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33091293_33091360_33094864
ENSMUSG00000037426.19_33061631_33095535_1	chr5	+	1074	10	ISM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	39700	53438	39700	-18109	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCATCTGCCAGCGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	33061630	33095535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33091293_33091360_33094864_33095049_33095488
ENSMUSG00000037426.19_33067828_33100672_1	chr5	+	1134	9	ISM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	45897	48301	45897	-12972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTCGTTACCTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	33067827	33100672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33091293_33091360_33094864_33095049_33095488_33095650_33100575
ENSMUSG00000037426.19_33070485_33101389_1	chr5	+	1109	8	ISM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	48554	47584	48554	-12255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGGGTGGATTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	33070484	33101389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33070565_33075268_33075490_33081505_33081710_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314
ENSMUSG00000037426.19_33075322_33102376_1	chr5	+	1179	8	ISM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	53391	46597	53391	-11268	internal_fragment	TRUE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACCCCGTGCAGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	33075321	33102376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33075490_33081505_33081710_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266
ENSMUSG00000037426.19_33075374_33102376_1	chr5	+	1127	8	ISM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	53443	46597	53443	-11268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACCCCGTGCAGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	33075373	33102376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33075490_33081505_33081710_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266
ENSMUSG00000037426.19_33075439_33102426_1	chr5	+	1112	8	ISM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	53508	46547	53508	-11218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTTTGTAGAGGGCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	33075438	33102426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33075490_33081505_33081710_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266
ENSMUSG00000037426.19_33081648_33113215_1	chr5	+	1132	9	ISM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	59717	35758	59717	-429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGACTGTGCACGGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	33081647	33113215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33081710_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196
ENSMUSG00000037426.19_33094955_33122067_1	chr5	+	1159	9	ISM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	73024	26906	73024	8423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGGAACTCCCAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	33094954	33122067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975
ENSMUSG00000037426.19_33095005_33122081_1	chr5	+	1123	9	ISM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	73074	26892	73074	8437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACATAGAACAGGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	33095004	33122081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975
ENSMUSG00000037426.19_33095600_33126010_1	chr5	+	1120	10	ISM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	73669	22963	73669	12366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCCTTTCACCGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	33095599	33126010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982
ENSMUSG00000037426.19_33101457_33132711_1	chr5	+	1075	10	ISM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	79526	16262	79526	-16262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGCTTCCAACGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	33101456	33132711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660
ENSMUSG00000037426.19_33102327_33132849_1	chr5	+	1127	9	ISM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	80396	16124	80396	-16124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTTTGGAGGACGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	33102326	33132849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660
ENSMUSG00000037426.19_33102431_33131244_1	chr5	+	743	7	ISM	ENSMUSG00000037426.19	ENST00000644331.1	5213	41	80507	17745	80500	17600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATGGACAAAGAACCGGA	NA	NA	NA	NA	NA	NA	NA	NA	33102430	33131244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160
ENSMUSG00000037426.19_33102437_33136774_1	chr5	+	1102	10	ISM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	80506	12199	80506	-12199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAACCGAACGGACCGGC	NA	NA	NA	NA	NA	NA	NA	NA	33102436	33136774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728
ENSMUSG00000037426.19_33104066_33141241_1	chr5	+	1127	10	ISM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	82135	7732	82135	-7732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGGTCCCAGTTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	33104065	33141241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202
ENSMUSG00000037426.19_33122071_33148308_1	chr5	+	1117	10	ISM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	100140	665	100140	-665	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAACGCAAGTTTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	33122070	33148308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ENSMUSG00000037426.19_33126047_33148499_1	chr5	+	1109	8	ISM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	104116	474	104116	-474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCATCAACCGTGACAACC	NA	NA	NA	NA	NA	NA	NA	NA	33126046	33148499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ENSMUSG00000037426.19_33136727_33148998_1	chr5	+	1204	5	ISM	ENSMUSG00000037426.19	ENSMUST00000120902.8	5195	41	114796	7	114796	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCCCTCCCTCCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	33136726	33148998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ENSMUSG00000037426.19_33136784_33148998_1	chr5	+	1147	5	ISM	ENSMUSG00000037426.19	ENSMUST00000120902.8	5195	41	114853	7	114853	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCCCTCCCTCCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	33136783	33148998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ENSMUSG00000037443.14_133857169_133883227_1	chr4	-	3047	11	ISM	ENSMUSG00000037443.14	ENSMUST00000040271.12	3893	14	31196	0	31065	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGTTTCCTAGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	133883227	133857168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987
ENSMUSG00000037443.14_133857651_133894638_1	chr4	-	3059	12	ISM	ENSMUSG00000037443.14	ENSMUST00000040271.12	3893	14	19785	482	19654	-474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTTAGCTTTCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	133894638	133857650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599
ENSMUSG00000037443.14_133857924_133914362_1	chr4	-	3077	14	FSM	ENSMUSG00000037443.14	ENSMUST00000040271.12	3893	14	61	755	61	-747	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTCCGCTATGTCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	133914362	133857923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
ENSMUSG00000037458.16_38488785_38497632_1	chr15	-	2421	6	NNC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	21875	-169	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGAGTGGTTGTATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	38497632	38488784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_38490641_38492483_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507
ENSMUSG00000037458.16_38488939_38498968_1	chr15	-	2333	7	NNC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	20539	-323	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGGTATAATATGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	38498968	38488938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_38490641_38492483_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912
ENSMUSG00000037458.16_38489091_38500608_1	chr15	-	2365	8	NNC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	18899	-475	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAATTGATCATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	38500608	38489090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_38490641_38492483_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541
ENSMUSG00000037458.16_38489153_38500618_1	chr15	-	2313	8	NNC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	18889	-537	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTACATAGAAGTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	38500618	38489152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_38490641_38492483_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541
ENSMUSG00000037458.16_38489199_38500677_1	chr15	-	2326	8	NNC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	18830	-583	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATGTGACTTCACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	38500677	38489198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_38490641_38492483_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541
ENSMUSG00000037458.16_38489295_38501735_1	chr15	-	2351	9	NNC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	17772	566	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGTCTCAGAATCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	38501735	38489294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_38490636_38492483_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647
ENSMUSG00000037458.16_38489341_38501758_1	chr15	-	2347	10	ISM	ENSMUSG00000037458.16	ENST00000684721.1	3839	13	17778	725	17749	520	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGCCAGGAATTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	38501758	38489340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38490628_38491903_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647
ENSMUSG00000037458.16_38489488_38507487_1	chr15	-	2329	10	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	12020	373	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAATTGGAATGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	38507487	38489487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_38490641_38492483_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430
ENSMUSG00000037458.16_38489548_38507543_1	chr15	-	2325	10	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	11964	313	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTATATCCAGAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	38507543	38489547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_38490641_38492483_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430
ENSMUSG00000037458.16_38489603_38507590_1	chr15	-	2317	10	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	11917	258	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGGGCTATGTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	38507590	38489602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_38490641_38492483_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430
ENSMUSG00000037458.16_38489755_38491936_1	chr15	-	1179	2	ISM	ENSMUSG00000037458.16	ENST00000347770.8	2856	13	27601	-106	27571	106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGTGTTTCTGTATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	38491936	38489754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38490717_38491719
ENSMUSG00000037458.16_38489755_38519254_1	chr15	-	2404	12	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	253	106	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	983	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGTGTTTCTGTATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	38519254	38489754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_38490641_38492483_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ENSMUSG00000037458.16_38489861_38497642_1	chr15	-	1642	7	ISM	ENSMUSG00000037458.16	ENST00000347770.8	2856	13	21895	0	21865	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAGTTCAGATTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	38497642	38489860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507
ENSMUSG00000037458.16_38489861_38519254_1	chr15	-	2298	12	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	253	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	891	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAGTTCAGATTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	38519254	38489860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_38490641_38492483_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ENSMUSG00000037458.16_38489978_38493744_1	chr15	-	1094	4	ISM	ENSMUSG00000037458.16	ENST00000683787.1	4228	13	25792	1481	25763	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTGTGGTCTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	38493744	38489977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717
ENSMUSG00000037458.16_38490055_38519413_1	chr15	-	2263	12	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	94	-194	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGTAGATCTTACTG	NA	NA	NA	NA	NA	NA	NA	NA	38519413	38490054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_38490641_38492483_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ENSMUSG00000037458.16_38490113_38494630_1	chr15	-	1190	5	ISM	ENSMUSG00000037458.16	ENST00000683787.1	4228	13	24906	1616	24877	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATCATAGTATTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	38494630	38490112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535
ENSMUSG00000037458.16_38490113_38500660_1	chr15	-	1682	9	ISM	ENSMUSG00000037458.16	ENST00000347770.8	2856	13	18877	252	18847	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	871	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATCATAGTATTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	38500660	38490112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541
ENSMUSG00000037458.16_38490242_38495567_1	chr15	-	1092	6	ISM	ENSMUSG00000037458.16	ENST00000683787.1	4228	13	23969	1745	23940	-381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTGATGTCTTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	38495567	38490241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516
ENSMUSG00000037458.16_38490295_38501733_1	chr15	-	1641	10	ISM	ENSMUSG00000037458.16	ENST00000347770.8	2856	13	17804	434	17774	-434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGTTTACATACAAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	38501733	38490294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647
ENSMUSG00000037458.16_38490356_38501778_1	chr15	-	1625	10	ISM	ENSMUSG00000037458.16	ENST00000347770.8	2856	13	17759	495	17729	-495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGCAACAAAATGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	38501778	38490355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647
ENSMUSG00000037458.16_38490375_38497632_1	chr15	-	1115	7	ISM	ENSMUSG00000037458.16	ENST00000683787.1	4228	13	21904	1878	21875	-514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAGCGTTTAAAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	38497632	38490374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507
ENSMUSG00000037458.16_38490470_38507492_1	chr15	-	1627	11	ISM	ENSMUSG00000037458.16	ENST00000347770.8	2856	13	12045	609	12015	-609	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCAGACAAAATCAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	38507492	38490469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507442
ENSMUSG00000037458.16_38490543_38499047_1	chr15	-	1095	8	ISM	ENSMUSG00000037458.16	ENST00000347770.8	2856	13	20490	682	20460	-682	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTGGGGGGAAAAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	38499047	38490542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912
ENSMUSG00000037458.16_38490638_38514799_1	chr15	-	1640	12	ISM	ENSMUSG00000037458.16	ENST00000347770.8	2856	13	4738	777	4708	-777	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAAGAAGACAGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	38514799	38490637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507442_38507591_38514716
ENSMUSG00000037458.16_38490686_38514855_1	chr15	-	1648	12	ISM	ENSMUSG00000037458.16	ENST00000347770.8	2856	13	4682	825	4652	-825	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGCAATGATGAAAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	38514855	38490685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507442_38507591_38514716
ENSMUSG00000037458.16_38491718_38519254_1	chr15	-	1719	12	ISM	ENSMUSG00000037458.16	ENST00000347770.8	2856	13	283	1857	253	-1857	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTGATTTTATTAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	38519254	38491717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507442_38507591_38514716_38514854_38519152
ENSMUSG00000037458.16_38492488_38519413_1	chr15	-	1661	11	ISM	ENSMUSG00000037458.16	ENST00000347770.8	2856	13	124	2627	94	-2627	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTTTTTTTTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	38519413	38492487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507442_38507591_38514716_38514854_38519152
ENSMUSG00000037458.16_38493756_38507590_1	chr15	-	1121	8	ISM	ENSMUSG00000037458.16	ENST00000684721.1	3839	13	11946	5140	11917	-3895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAAGTTGTTGAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	38507590	38493755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430
ENSMUSG00000037458.16_38494534_38514853_1	chr15	-	1135	8	ISM	ENSMUSG00000037458.16	ENST00000684721.1	3839	13	4683	5918	4654	-4673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTCAGGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	38514853	38494533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716
ENSMUSG00000037458.16_38495516_38519254_1	chr15	-	1161	8	ISM	ENSMUSG00000037458.16	ENST00000684721.1	3839	13	282	6900	253	-5655	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTCTTTAATTATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	38519254	38495515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ENSMUSG00000037458.16_38498913_38519413_1	chr15	-	1102	6	ISM	ENSMUSG00000037458.16	ENST00000684721.1	3839	13	123	10297	94	-9052	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGTATGCCGAAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	38519413	38498912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ENSMUSG00000037461.11_191307888_191345833_1	chr1	+	2175	15	ISM	ENSMUSG00000037461.11	ENST00000366993.7	3130	20	12	7920	12	-7920	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCTGAGGAATGTAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	191307887	191345833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750
ENSMUSG00000037461.11_191318684_191351830_1	chr1	+	2119	16	ISM	ENSMUSG00000037461.11	ENST00000440600.6	3034	19	10817	1923	10808	-1923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGTCTGTGTGTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	191318683	191351830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707
ENSMUSG00000037461.11_191328330_191353366_1	chr1	+	2090	15	ISM	ENSMUSG00000037461.11	ENST00000440600.6	3034	19	20463	387	20454	-387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTGGAACGCACAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	191328329	191353366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037461.11_191328407_191353423_1	chr1	+	2070	15	ISM	ENSMUSG00000037461.11	ENST00000440600.6	3034	19	20540	330	20531	-330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGAAGACTGGCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	191328406	191353423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037461.11_191329088_191353608_1	chr1	+	2088	14	ISM	ENSMUSG00000037461.11	ENST00000440600.6	3034	19	21221	145	21212	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCCATCAGACTACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	191329087	191353608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037461.11_191334388_191353758_1	chr1	+	2173	13	ISM	ENSMUSG00000037461.11	ENST00000440600.6	3034	19	26521	-5	26512	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATAACCTGGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	191334387	191353758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037461.11_191338259_191353935_1	chr1	+	2102	11	ISM	ENSMUSG00000037461.11	ENST00000440600.6	3034	19	30392	-182	30383	182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAATTTCTTAAACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	191338258	191353935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037461.11_191339962_191354079_1	chr1	+	2144	10	ISM	ENSMUSG00000037461.11	ENST00000440600.6	3034	19	32095	-326	32086	326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGACTGGCCCGACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	191339961	191354079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037461.11_191340072_191354141_1	chr1	+	2096	10	ISM	ENSMUSG00000037461.11	ENST00000440600.6	3034	19	32205	-388	32196	388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCCTGGGCTGGAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	191340071	191354141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037461.11_191342553_191354307_1	chr1	+	2085	9	ISM	ENSMUSG00000037461.11	ENST00000440600.6	3034	19	34686	-554	34677	554	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCTCCAGCTAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	191342552	191354307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037461.11_191343995_191354440_1	chr1	+	2132	8	ISM	ENSMUSG00000037461.11	ENST00000440600.6	3034	19	36128	-687	36119	687	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATCCTTCCCCGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	191343994	191354440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037461.11_191344090_191354489_1	chr1	+	2086	8	ISM	ENSMUSG00000037461.11	ENST00000440600.6	3034	19	36223	-736	36214	736	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTCTAGACAGCTATC	NA	NA	NA	NA	NA	NA	NA	NA	191344089	191354489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037461.11_191345171_191354620_1	chr1	+	2086	7	ISM	ENSMUSG00000037461.11	ENST00000440600.6	3034	19	37304	-867	37295	867	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTTGATTTAACAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	191345170	191354620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037461.11_191345229_191354687_1	chr1	+	2095	7	ISM	ENSMUSG00000037461.11	ENST00000440600.6	3034	19	37362	-934	37353	934	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCCGATACCCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	191345228	191354687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037461.11_191345749_191354858_1	chr1	+	2175	6	ISM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	38001	942	37873	-942	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTGGTTTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	191345748	191354858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037461.11_191347839_191354978_1	chr1	+	2094	4	ISM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	40091	822	39963	-822	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCATAGTCTGTGCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	191347838	191354978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037461.11_191351766_191355237_1	chr1	+	2089	2	ISM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	44018	563	43890	-563	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACTCTAACTCAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	191351765	191355237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191351894_191353276
ENSMUSG00000037465.11_38295388_38296944_1	chr15	-	1107	2	ISM	ENSMUSG00000037465.11	ENSMUST00000226363.2	2917	4	2382	728	2382	-728	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGTTTAGAAAAAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	38296944	38295387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38296409_38296858
ENSMUSG00000037465.11_38295890_38297436_1	chr15	-	1097	2	ISM	ENSMUSG00000037465.11	ENSMUST00000226363.2	2917	4	1890	1230	1890	-1230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAGCGCAGCACAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	38297436	38295889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38296409_38296858
ENSMUSG00000037465.11_38296101_38297626_1	chr15	-	1076	2	ISM	ENSMUSG00000037465.11	ENSMUST00000226363.2	2917	4	1700	1441	1700	-1441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGATGGTGTCAAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	38297626	38296100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38296409_38296858
ENSMUSG00000037465.11_38296281_38297884_1	chr15	-	1060	3	ISM	ENSMUSG00000037465.11	ENSMUST00000226363.2	2917	4	1442	1621	1442	-1621	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGAGGAGCGACCATTT	NA	NA	NA	NA	NA	NA	NA	NA	38297884	38296280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38296409_38296858_38297772_38297865
ENSMUSG00000037465.11_38296337_38297955_1	chr15	-	1075	3	ISM	ENSMUSG00000037465.11	ENSMUST00000226363.2	2917	4	1371	1677	1371	-1677	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGCGGACACACACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	38297955	38296336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38296409_38296858_38297772_38297865
ENSMUSG00000037465.11_38296984_38300950_1	chr15	-	1167	3	ISM	ENSMUSG00000037465.11	ENSMUST00000074043.7	3044	4	0	2327	0	-2324	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCAAGGGTCACTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	38300950	38296983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_38297772_38297865_38298097_38300802
ENSMUSG00000037466.14_113120126_113126766_1	chr12	+	958	8	FSM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	85	1398	85	-1398	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCAATCCAGTACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	113120125	113126766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_113120192_113120294_113120374_113120780_113120984_113121197_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
ENSMUSG00000037466.14_113120878_113127019_1	chr12	+	969	6	ISM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	837	1145	837	-1145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTGTAGGATCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	113120877	113127019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113120984_113121197_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
ENSMUSG00000037466.14_113120946_113127075_1	chr12	+	957	6	ISM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	905	1089	905	-1089	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCCAGAGCCCTTTCGC	NA	NA	NA	NA	NA	NA	NA	NA	113120945	113127075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113120984_113121197_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
ENSMUSG00000037466.14_113121191_113127180_1	chr12	+	1031	5	ISM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	1150	984	1150	-984	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGGCTGCTGCCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	113121190	113127180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
ENSMUSG00000037466.14_113121292_113127218_1	chr12	+	968	5	ISM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	1251	946	1251	-946	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTTTTGGCACACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	113121291	113127218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
ENSMUSG00000037466.14_113125420_113127554_1	chr12	+	975	2	ISM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	5379	610	5379	-610	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGGGACGTGCGTACAGC	NA	NA	NA	NA	NA	NA	NA	NA	113125419	113127554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_113125513_113126672
ENSMUSG00000037469.12_28313645_28316633_1	chr7	-	817	8	NNC	ENSMUSG00000037469.12	novel	870	8	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGCAGGTGGGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	28316633	28313644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_28313716_28313817_28313886_28313960_28314019_28314104_28314213_28314285_28314401_28314497_28314561_28315905_28316089_28316482
ENSMUSG00000037469.12_28313645_28316633_2	chr7	-	816	8	NNC	ENSMUSG00000037469.12	novel	870	8	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGCAGGTGGGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	28316633	28313644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_28313716_28313817_28313886_28313960_28314019_28314104_28314213_28314285_28314401_28314503_28314561_28315905_28316089_28316477
ENSMUSG00000037469.12_28313645_28316633_3	chr7	-	818	8	NNC	ENSMUSG00000037469.12	novel	870	8	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGCAGGTGGGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	28316633	28313644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_28313716_28313817_28313886_28313960_28314019_28314104_28314213_28314285_28314401_28314497_28314561_28315909_28316089_28316477
ENSMUSG00000037469.12_28313645_28316633_4	chr7	-	822	8	FSM	ENSMUSG00000037469.12	ENST00000594229.1	870	8	48	0	48	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGCAGGTGGGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	28316633	28313644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28313716_28313817_28313886_28313960_28314019_28314104_28314213_28314285_28314401_28314497_28314561_28315905_28316089_28316477
ENSMUSG00000037474.14_191269477_191300668_1	chr1	-	3791	12	ISM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	6988	0	6988	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTGGAAGAGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	191300668	191269476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606
ENSMUSG00000037474.14_191269822_191307498_1	chr1	-	3709	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	158	345	158	-345	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTGAGCTGACCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	191307498	191269821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ENSMUSG00000037474.14_191269869_191307623_1	chr1	-	3787	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	33	392	33	-392	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTCAAAGGTCATGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	191307623	191269868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ENSMUSG00000037474.14_191269934_191307623_1	chr1	-	3722	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	33	457	33	-457	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGGGGTAAGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	191307623	191269933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ENSMUSG00000037492.17_24159674_24551314_1	chr8	+	2147	6	FSM	ENSMUSG00000037492.17	ENST00000315769.11	2151	6	4	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTTTTTGTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	24159673	24551314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_24159818_24238415_24238522_24287357_24287448_24392030_24392188_24505131_24505229_24549761
ENSMUSG00000037492.17_24159674_24551314_2	chr8	+	2140	6	NNC	ENSMUSG00000037492.17	novel	2151	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTTTTTGTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	24159673	24551314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_24159818_24238415_24238522_24287357_24287448_24392030_24392188_24505138_24505229_24549761
ENSMUSG00000037492.17_24159674_24551314_3	chr8	+	2142	6	NNC	ENSMUSG00000037492.17	novel	2151	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTTTTTGTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	24159673	24551314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_24159818_24238415_24238522_24287357_24287448_24392035_24392188_24505131_24505229_24549761
ENSMUSG00000037492.17_24159674_24551314_4	chr8	+	2140	6	NNC	ENSMUSG00000037492.17	novel	2151	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTTTTTGTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	24159673	24551314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_24159818_24238415_24238522_24287357_24287448_24392030_24392188_24505131_24505229_24549768
ENSMUSG00000037493.7_54452078_54453369_1	chr9	-	888	2	ISM	ENSMUSG00000037493.7	ENSMUST00000041901.7	1433	6	14133	0	13942	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTCTCCGTGTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	54453369	54452077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54452769_54453172
ENSMUSG00000037493.7_54452221_54455686_1	chr9	-	814	3	ISM	ENSMUSG00000037493.7	ENSMUST00000041901.7	1433	6	11816	143	11625	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATAAGGTTCGGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	54455686	54452220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54452769_54453172_54453369_54455616
ENSMUSG00000037493.7_54452280_54455730_1	chr9	-	799	3	ISM	ENSMUSG00000037493.7	ENST00000539011.5	685	5	11581	-320	11581	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACCAAAGCCAAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	54455730	54452279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54452769_54453172_54453369_54455616
ENSMUSG00000037493.7_54452394_54457146_1	chr9	-	801	4	ISM	ENSMUSG00000037493.7	ENST00000539011.5	685	5	10165	-206	10165	206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGTGTGCTGGGCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	54457146	54452393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54452769_54453172_54453369_54455616_54455765_54457064
ENSMUSG00000037493.7_54452563_54461805_1	chr9	-	697	5	ISM	ENSMUSG00000037493.7	ENSMUST00000041901.7	1433	6	5697	485	5506	37	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACTGCAACAGGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	54461805	54452562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54452769_54453172_54453369_54455616_54455765_54457064_54457177_54461770
ENSMUSG00000037493.7_54452683_54453369_1	chr9	-	283	2	ISM	ENSMUSG00000037493.7	ENST00000539011.5	685	5	13942	83	13942	-83	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCAAGTGCTCCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	54453369	54452682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54452769_54453172
ENSMUSG00000037493.7_54452683_54467502_1	chr9	-	828	6	FSM	ENSMUSG00000037493.7	ENSMUST00000041901.7	1433	6	0	605	0	-83	multi-exon	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCAAGTGCTCCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	54467502	54452682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_54452769_54453172_54453369_54455616_54455765_54457064_54457177_54461770_54461806_54467251
ENSMUSG00000037493.7_54453307_54457125_1	chr9	-	271	3	ISM	ENSMUSG00000037493.7	ENST00000539011.5	685	5	10186	707	10186	-707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAGTTGGAAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	54457125	54453306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54453369_54455616_54455765_54457064
ENSMUSG00000037493.7_54455674_54467308_1	chr9	-	260	3	ISM	ENSMUSG00000037493.7	ENST00000539011.5	685	5	3	3074	3	-3074	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGCGAATCAGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	54467308	54455673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54455765_54457064_54457177_54467251
ENSMUSG00000037525.6_99368435_99372421_1	chr15	-	611	2	FSM	ENSMUSG00000037525.6	ENSMUST00000040313.6	1276	2	190	475	190	-475	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGACCGAAGCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	99372421	99368434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_99368961_99372336
ENSMUSG00000037525.6_99368545_99372589_1	chr15	-	669	2	FSM	ENSMUSG00000037525.6	ENSMUST00000040313.6	1276	2	22	585	22	-585	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGATCACTTCCGCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	99372589	99368544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_99368961_99372336
ENSMUSG00000037531.9_32780545_32784270_1	chr3	-	1459	3	ISM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	7026	999	7026	-999	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCTCCTTCTTCTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	32784270	32780544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_32781867_32782580_32782677_32784229
ENSMUSG00000037531.9_32780871_32788323_1	chr3	-	1448	6	ISM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	2973	1325	2973	-1325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTAAGTGGAAATTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	32788323	32780870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256
ENSMUSG00000037531.9_32780929_32788377_1	chr3	-	1444	6	ISM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	2919	1383	2919	-1383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATTTCAAGGAAAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	32788377	32780928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256
ENSMUSG00000037531.9_32781136_32790984_1	chr3	-	1462	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	312	1590	312	-1590	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGCACGCTTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	32790984	32781135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
ENSMUSG00000037531.9_32781340_32791169_1	chr3	-	1443	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	127	1794	127	-1794	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCAGTTTGTAGGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	32791169	32781339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
ENSMUSG00000037531.9_32781394_32791296_1	chr3	-	1516	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	0	1848	0	-1848	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGCTCTTCCAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	32791296	32781393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
ENSMUSG00000037541.23_143729432_143812819_1	chr7	+	883	5	ISM	ENSMUSG00000037541.23	ENST00000468619.6	927	6	31	36549	31	-36549	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAAGCTCTTCCGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	143729431	143812819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_143729694_143733491_143733811_143740556_143740727_143746153_143746268_143812801
ENSMUSG00000037542.14_21253246_21265178_1	chr10	+	648	4	ISM	ENSMUSG00000037542.14	ENST00000367847.2	1316	6	6	6563	6	-6563	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGTGTATCCCGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	21253245	21265178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21253378_21256728_21256877_21258190_21258347_21264966
ENSMUSG00000037542.14_21253246_21271382_1	chr10	+	939	6	FSM	ENSMUSG00000037542.14	ENST00000367845.6	1304	6	6	359	6	-359	multi-exon	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTACTTCATGCTTCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	21253245	21271382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_21253378_21256728_21256877_21258190_21258347_21260534_21260685_21264966_21265224_21271286
ENSMUSG00000037542.14_21253246_21271449_1	chr10	+	1006	6	FSM	ENSMUSG00000037542.14	ENST00000367845.6	1304	6	6	292	6	-292	multi-exon	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGTCCAGTGACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	21253245	21271449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_21253378_21256728_21256877_21258190_21258347_21260534_21260685_21264966_21265224_21271286
ENSMUSG00000037542.14_21253246_21271493_1	chr10	+	1050	6	FSM	ENSMUSG00000037542.14	ENST00000367845.6	1304	6	6	248	6	-248	multi-exon	FALSE	canonical	NA	NA	NA	NA	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGATTACGAGAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	21253245	21271493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_21253378_21256728_21256877_21258190_21258347_21260534_21260685_21264966_21265224_21271286
ENSMUSG00000037542.14_21256816_21267629_1	chr10	+	638	4	ISM	ENSMUSG00000037542.14	ENST00000367847.2	1316	6	3576	4112	3576	-4112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGATCTCTGCCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	21256815	21267629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21256877_21258190_21258347_21264966_21265224_21267465
ENSMUSG00000037542.14_21258252_21271404_1	chr10	+	632	4	ISM	ENSMUSG00000037542.14	ENST00000367847.2	1316	6	5012	337	5012	-337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAACAGACATTAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	21258251	21271404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21258347_21264966_21265224_21267465_21267628_21271286
ENSMUSG00000037542.14_21258252_21271742_1	chr10	+	958	4	ISM	ENSMUSG00000037542.14	ENST00000367845.6	1304	6	5012	-1	5012	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACAGCTGCTGTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	21258251	21271742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21258347_21260534_21260685_21264966_21265224_21271286
ENSMUSG00000037542.14_21267463_21271742_1	chr10	+	621	2	ISM	ENSMUSG00000037542.14	ENST00000367847.2	1316	6	14223	-1	14223	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACAGCTGCTGTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	21267462	21271742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_21267628_21271286
ENSMUSG00000037544.15_47625245_47645174_1	chr14	-	1690	12	ISM	ENSMUSG00000037544.15	ENSMUST00000043296.10	2964	19	10690	9	10460	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAACATTCTTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	47645174	47625244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093
ENSMUSG00000037544.15_47625366_47645258_1	chr14	-	1653	12	ISM	ENSMUSG00000037544.15	ENSMUST00000043296.10	2964	19	10606	130	10376	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGGATTTCTGAGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	47645258	47625365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093
ENSMUSG00000037544.15_47625511_47647795_1	chr14	-	1649	13	ISM	ENSMUSG00000037544.15	ENSMUST00000043296.10	2964	19	8069	275	7839	-275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGAGGTGACCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	47647795	47625510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764
ENSMUSG00000037544.15_47626869_47649123_1	chr14	-	1841	13	ISM	ENSMUSG00000037544.15	ENSMUST00000043296.10	2964	19	6741	1633	6511	-694	intron_retention	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTTTAGACTATAATC	NA	NA	NA	NA	NA	NA	NA	NA	47649123	47626868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901
ENSMUSG00000037544.15_47628063_47650497_1	chr14	-	1680	14	ISM	ENSMUSG00000037544.15	ENSMUST00000180299.8	4067	17	5137	1888	5137	-1888	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGCTGGTGATGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	47650497	47628062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434
ENSMUSG00000037544.15_47631592_47651296_1	chr14	-	1761	13	ISM	ENSMUSG00000037544.15	ENSMUST00000180299.8	4067	17	4338	5417	4338	-5417	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTCATGTGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	47651296	47631591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102
ENSMUSG00000037544.15_47631741_47653829_1	chr14	-	1649	14	ISM	ENSMUSG00000037544.15	ENSMUST00000180299.8	4067	17	1805	5566	1805	-5566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCTCTGTCTGCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	47653829	47631740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792
ENSMUSG00000037544.15_47633251_47653964_1	chr14	-	1711	13	ISM	ENSMUSG00000037544.15	ENSMUST00000180299.8	4067	17	1670	7076	1670	-7076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTTCAGAATCGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	47653964	47633250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792
ENSMUSG00000037544.15_47633302_47653964_1	chr14	-	1660	13	ISM	ENSMUSG00000037544.15	ENSMUST00000180299.8	4067	17	1670	7127	1670	-7127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGCTCCGGAGAACACA	NA	NA	NA	NA	NA	NA	NA	NA	47653964	47633301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792
ENSMUSG00000037544.15_47633408_47655634_1	chr14	-	1687	14	ISM	ENSMUSG00000037544.15	ENSMUST00000180299.8	4067	17	0	7233	0	-7233	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAAGCAAAGCAGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	47655634	47633407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ENSMUSG00000037544.15_47637044_47655864_1	chr14	-	1733	12	ISM	ENSMUSG00000037544.15	ENSMUST00000180299.8	4067	17	-230	10869	0	-10869	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACGGGGTGAAAAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	47655864	47637043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ENSMUSG00000037563.16_28050077_28052580_1	chr7	+	1102	5	NNC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6023	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCTGGCCTTTATGGT	NA	NA	NA	NA	NA	NA	NA	NA	28050076	28052580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_28050277_28050416_28050512_28051601_28051699_28051787_28051836_28051918
ENSMUSG00000037563.16_28050077_28052580_2	chr7	+	1100	5	NNC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6023	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCTGGCCTTTATGGT	NA	NA	NA	NA	NA	NA	NA	NA	28050076	28052580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_28050277_28050416_28050519_28051610_28051699_28051787_28051836_28051918
ENSMUSG00000037568.13_190680426_190690843_1	chr1	-	2061	2	ISM	ENSMUSG00000037568.13	ENSMUST00000047409.9	4032	8	20356	581	20356	-581	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCACCATGACAAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	190690843	190680425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_190682454_190690810
ENSMUSG00000037568.13_190680732_190692507_1	chr1	-	2051	3	ISM	ENSMUSG00000037568.13	ENSMUST00000047409.9	4032	8	18692	887	18692	-887	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTGACACTGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	190692507	190680731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_190682454_190690810_190690927_190692294
ENSMUSG00000037568.13_190680775_190692566_1	chr1	-	2067	3	ISM	ENSMUSG00000037568.13	ENSMUST00000047409.9	4032	8	18633	930	18633	-930	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCGGGACAACCTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	190692566	190680774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_190682454_190690810_190690927_190692294
ENSMUSG00000037568.13_190681095_190702684_1	chr1	-	2073	6	ISM	ENSMUSG00000037568.13	ENSMUST00000047409.9	4032	8	8515	1250	8515	-1250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCACCCTTAAACCAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	190702684	190681094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_190682454_190690810_190690927_190692294_190692677_190698399_190698475_190699125_190699183_190702600
ENSMUSG00000037568.13_190681379_190710660_1	chr1	-	2077	7	ISM	ENSMUSG00000037568.13	ENSMUST00000047409.9	4032	8	539	1534	539	-1534	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGCCGTGTCACCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	190710660	190681378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_190682454_190690810_190690927_190692294_190692677_190698399_190698475_190699125_190699183_190702600_190702690_190710377
ENSMUSG00000037568.13_190681642_190711442_1	chr1	-	2047	8	FSM	ENSMUSG00000037568.13	ENSMUST00000166139.7	3897	8	51	1799	51	-1797	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATCATCTGCTCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	190711442	190681641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_190682454_190690810_190690927_190692294_190692677_190698399_190698475_190699125_190699183_190702600_190702690_190710377_190710785_190711333
ENSMUSG00000037570.17_99140707_99149809_1	chr15	-	1862	14	NNC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAGTAGCTTCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	99149809	99140706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142511_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
ENSMUSG00000037570.17_99140707_99149809_3	chr15	-	1869	15	NNC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2093	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAGTAGCTTCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	99149809	99140706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142600_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
ENSMUSG00000037572.18_47478989_47485469_1	chr14	-	941	7	ISM	ENSMUSG00000037572.18	ENST00000360586.8	3277	23	26840	-74	26840	74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATTCTTATAATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	47485469	47478988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47485194_47485356_47485452
ENSMUSG00000037572.18_47479107_47485547_1	chr14	-	901	7	ISM	ENSMUSG00000037572.18	ENST00000360586.8	3277	23	26762	44	26762	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGAAATTGTCAGCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	47485547	47479106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47485194_47485356_47485452
ENSMUSG00000037572.18_47479197_47485637_1	chr14	-	901	7	ISM	ENSMUSG00000037572.18	ENST00000360586.8	3277	23	26672	134	26672	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGATCTGTGAGACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	47485637	47479196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47485194_47485356_47485452
ENSMUSG00000037572.18_47481292_47488292_1	chr14	-	905	7	ISM	ENSMUSG00000037572.18	ENST00000360586.8	3277	23	24017	2229	24017	-2229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTAGAGTATTGTCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	47488292	47481291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47485194_47485356_47485452_47485671_47488216
ENSMUSG00000037572.18_47482503_47489439_1	chr14	-	858	7	ISM	ENSMUSG00000037572.18	ENST00000360586.8	3277	23	22870	3440	22870	-3440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTAAAAGCTCGTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	47489439	47482502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47482570_47482743_47482915_47483289_47483334_47485194_47485356_47485452_47485671_47488216_47488349_47489374
ENSMUSG00000037572.18_47482743_47493719_1	chr14	-	1001	7	ISM	ENSMUSG00000037572.18	ENST00000360586.8	3277	23	18590	3680	18590	-3680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCTTTGCTGACCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	47493719	47482742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47482915_47483289_47483334_47485194_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560
ENSMUSG00000037572.18_47482886_47496037_1	chr14	-	916	8	ISM	ENSMUSG00000037572.18	ENST00000360586.8	3277	23	16272	3823	16272	-3823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGCGAATTCAACACGCT	NA	NA	NA	NA	NA	NA	NA	NA	47496037	47482885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47482915_47483289_47483334_47485194_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977
ENSMUSG00000037572.18_47485192_47498836_1	chr14	-	964	7	ISM	ENSMUSG00000037572.18	ENST00000360586.8	3277	23	13473	6129	13473	-6129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTGCCGTGCAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	47498836	47485191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796
ENSMUSG00000037572.18_47485284_47498856_1	chr14	-	892	7	ISM	ENSMUSG00000037572.18	ENST00000360586.8	3277	23	13453	6221	13453	-6221	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTGTTTCTGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	47498856	47485283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796
ENSMUSG00000037572.18_47485336_47498915_1	chr14	-	899	7	ISM	ENSMUSG00000037572.18	ENST00000360586.8	3277	23	13394	6273	13394	-6273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGAGTCGGCCACGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	47498915	47485335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796
ENSMUSG00000037572.18_47485591_47500948_1	chr14	-	917	7	ISM	ENSMUSG00000037572.18	ENST00000360586.8	3277	23	11361	6528	11361	-6528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATATGCTTCTCGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	47500948	47485590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895
ENSMUSG00000037572.18_47488304_47501080_1	chr14	-	882	6	ISM	ENSMUSG00000037572.18	ENST00000360586.8	3277	23	11229	9241	11229	6832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGCTAAAAATGGTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	47501080	47488303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895
ENSMUSG00000037572.18_47489467_47503293_1	chr14	-	908	6	ISM	ENSMUSG00000037572.18	ENST00000360586.8	3277	23	9016	10404	9016	5669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCCTCCCACCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	47503293	47489466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130
ENSMUSG00000037572.18_47493575_47504470_1	chr14	-	926	6	ISM	ENSMUSG00000037572.18	ENST00000360586.8	3277	23	7839	14512	7839	1561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGCAGCTAAGGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	47504470	47493574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437
ENSMUSG00000037572.18_47493641_47504519_1	chr14	-	909	6	ISM	ENSMUSG00000037572.18	ENST00000360586.8	3277	23	7790	14578	7790	1495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAACATAAGAGAGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	47504519	47493640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437
ENSMUSG00000037572.18_47493696_47504569_1	chr14	-	904	6	ISM	ENSMUSG00000037572.18	ENST00000360586.8	3277	23	7740	14633	7740	1440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGGCTGTGTTCGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	47504569	47493695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437
ENSMUSG00000037572.18_47496064_47505574_1	chr14	-	903	6	ISM	ENSMUSG00000037572.18	ENSMUST00000111790.2	2962	14	8715	928	6735	-928	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGGAAGAAAAACCAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	47505574	47496063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528
ENSMUSG00000037572.18_47498867_47506131_1	chr14	-	896	6	ISM	ENSMUSG00000037572.18	ENSMUST00000111790.2	2962	14	8158	3731	6178	-3731	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCCTTCCTGGACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	47506131	47498866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112
ENSMUSG00000037572.18_47498973_47507653_1	chr14	-	940	7	ISM	ENSMUSG00000037572.18	ENSMUST00000111790.2	2962	14	6636	3837	4656	-3837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAGGACATCGAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	47507653	47498972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591
ENSMUSG00000037572.18_47500896_47509693_1	chr14	-	1006	7	ISM	ENSMUSG00000037572.18	ENSMUST00000111790.2	2962	14	4596	5760	2616	-5760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATAGGGAGCGTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	47509693	47500895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592
ENSMUSG00000037572.18_47501012_47510354_1	chr14	-	916	8	ISM	ENSMUSG00000037572.18	ENSMUST00000111790.2	2962	14	3935	5876	1955	-5876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGACACCTCTATCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	47510354	47501011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323
ENSMUSG00000037572.18_47503257_47511433_1	chr14	-	917	9	ISM	ENSMUSG00000037572.18	ENSMUST00000111790.2	2962	14	2856	8121	876	-8121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGTATTCACAACCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	47511433	47503256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369
ENSMUSG00000037572.18_47504537_47512263_1	chr14	-	910	9	ISM	ENSMUSG00000037572.18	ENSMUST00000111790.2	2962	14	2026	9401	46	-9401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCTTTTTCAAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	47512263	47504536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200
ENSMUSG00000037573.6_94101132_94105463_1	chr11	+	1211	2	NNC	ENSMUSG00000037573.6	novel	1360	2	NA	NA	52	-91	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACGAGAAGTCTTTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	94101131	94105463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_94101195_94104315
ENSMUSG00000037573.6_94101132_94105463_2	chr11	+	1217	2	FSM	ENSMUSG00000037573.6	ENST00000268957.3	1360	2	52	91	52	-91	multi-exon	FALSE	canonical	NA	NA	NA	NA	2384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACGAGAAGTCTTTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	94101131	94105463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_94101197_94104311
ENSMUSG00000037573.6_94102280_94104678_1	chr11	+	645	2	FSM	ENSMUSG00000037573.6	ENSMUST00000041589.6	2288	2	0	1643	0	-876	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAGAGAGTGGTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	94102279	94104678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_94102558_94104311
ENSMUSG00000037573.6_94102418_94104758_1	chr11	+	587	2	FSM	ENSMUSG00000037573.6	ENSMUST00000041589.6	2288	2	138	1563	138	-796	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCCTACCAGATCGGCG	NA	NA	NA	NA	NA	NA	NA	NA	94102417	94104758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_94102558_94104311
ENSMUSG00000037573.6_94102508_94104820_1	chr11	+	559	2	FSM	ENSMUSG00000037573.6	ENSMUST00000041589.6	2288	2	228	1501	228	-734	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGCTGTGAGCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	94102507	94104820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_94102558_94104311
ENSMUSG00000037580.11_47391462_47394949_1	chr14	-	232	2	ISM	ENSMUSG00000037580.11	ENST00000543643.6	840	6	31773	95	31773	-95	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATTTGATGTAATTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	47394949	47391461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47391610_47394865
ENSMUSG00000037580.11_47391577_47406713_1	chr14	-	251	5	ISM	ENSMUSG00000037580.11	ENST00000543643.6	840	6	20009	210	20009	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTCTCATCAGCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	47406713	47391576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47391610_47394865_47394951_47396319_47396352_47403932_47403989_47406668
ENSMUSG00000037580.11_47392950_47406761_1	chr14	-	698	5	ISM	ENSMUSG00000037580.11	ENSMUST00000089959.7	2775	6	20109	1598	19961	-1583	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTGACATAATCACTG	NA	NA	NA	NA	NA	NA	NA	NA	47406761	47392949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47393382_47394865_47394951_47396319_47396352_47403932_47403989_47406668
ENSMUSG00000037580.11_47403958_47426485_1	chr14	-	218	3	ISM	ENSMUSG00000037580.11	ENST00000543643.6	840	6	237	12591	237	-12591	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGGTCTCAGTAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	47426485	47403957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47403989_47406668_47406779_47426408
ENSMUSG00000037594.12_112772894_112779338_1	chr12	+	1089	5	FSM	ENSMUSG00000037594.12	ENSMUST00000037014.11	1960	5	337	534	299	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTTGTACCTTTATGAG	NA	NA	NA	NA	NA	NA	NA	NA	112772893	112779338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_112773429_112774493_112774631_112775802_112775933_112778082_112778200_112779168
ENSMUSG00000037594.12_112778117_112779512_1	chr12	+	427	2	ISM	ENSMUSG00000037594.12	ENSMUST00000177808.3	1207	6	5522	-174	5522	174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGTCTCCATGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	112778116	112779512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_112778200_112779168
ENSMUSG00000037594.12_112778156_112779576_1	chr12	+	452	2	ISM	ENSMUSG00000037594.12	ENSMUST00000177808.3	1207	6	5561	-238	5561	238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTCACAGTTGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	112778155	112779576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_112778200_112779168
ENSMUSG00000037601.12_93849434_93851518_1	chr11	-	931	2	ISM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	7829	1629	7580	-1629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGGAGGTAGGATCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	93851518	93849433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_93850340_93851493
ENSMUSG00000037601.12_93849545_93854068_1	chr11	-	924	3	ISM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	5279	1740	5030	-1740	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCTGGGGATGTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	93854068	93849544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_93850340_93851493_93851607_93854052
ENSMUSG00000037601.12_93849670_93856693_1	chr11	-	945	4	ISM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	2654	1865	2405	1824	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAACCTTGTCAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	93856693	93849669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633
ENSMUSG00000037601.12_93849737_93856727_1	chr11	-	912	4	ISM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	2620	1932	2371	1757	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGTAATTCTAACACTCA	NA	NA	NA	NA	NA	NA	NA	NA	93856727	93849736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633
ENSMUSG00000037601.12_93849883_93859157_1	chr11	-	913	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	190	2078	-59	1611	multi-exon	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCCTTCCTATCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	93859157	93849882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
ENSMUSG00000037601.12_93849931_93859211_1	chr11	-	919	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	136	2126	-113	1563	multi-exon	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTTTGAGCCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	93859211	93849930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
ENSMUSG00000037601.12_93849997_93859347_1	chr11	-	989	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	0	2192	0	1497	multi-exon	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGAATGTAAATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	93859347	93849996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
ENSMUSG00000037606.19_143242499_143249342_1	chr7	-	2057	8	ISM	ENSMUSG00000037606.19	ENST00000525498.5	2546	19	14249	-795	14249	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTTGGGGGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	143249342	143242498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143243695_143245624_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251
ENSMUSG00000037606.19_143242845_143254957_1	chr7	-	1943	11	ISM	ENSMUSG00000037606.19	ENST00000525498.5	2546	19	8634	-449	8634	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAAGCTTGCCACTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	143254957	143242844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143243695_143245624_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928
ENSMUSG00000037606.19_143242962_143256508_1	chr7	-	1978	12	ISM	ENSMUSG00000037606.19	ENST00000525498.5	2546	19	7083	-332	7083	332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATCTGCCCTACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	143256508	143242961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143243695_143245624_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426
ENSMUSG00000037606.19_143243294_143257072_1	chr7	-	1831	13	ISM	ENSMUSG00000037606.19	ENST00000525498.5	2546	19	6519	0	6519	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCAGTGTGCCCCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	143257072	143243293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143243695_143245624_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887
ENSMUSG00000037606.19_143243414_143258319_1	chr7	-	1784	14	ISM	ENSMUSG00000037606.19	ENST00000525498.5	2546	19	5272	120	5272	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGGCTATGAGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	143258319	143243413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143243695_143245624_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246
ENSMUSG00000037606.19_143243414_143258439_2	chr7	-	1904	14	ISM	ENSMUSG00000037606.19	ENST00000525498.5	2546	19	5152	120	5152	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGGCTATGAGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	143258439	143243413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143243695_143245624_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246
ENSMUSG00000037606.19_143243573_143258856_1	chr7	-	1896	15	ISM	ENSMUSG00000037606.19	ENST00000525498.5	2546	19	4735	279	4735	-279	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATATCCTCAAATAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	143258856	143243572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143243695_143245624_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246_143258440_143258705
ENSMUSG00000037606.19_143243605_143261132_1	chr7	-	1935	16	ISM	ENSMUSG00000037606.19	ENST00000525498.5	2546	19	2459	311	2459	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATCTTCCTGACGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	143261132	143243604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143243695_143245624_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246_143258440_143258705_143258878_143261082
ENSMUSG00000037606.19_143245662_143262845_1	chr7	-	1944	16	ISM	ENSMUSG00000037606.19	ENST00000263650.12	2914	21	6716	2368	746	-2368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCCATTCAGGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	143262845	143245661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246_143258440_143258705_143258878_143261082_143261168_143262744
ENSMUSG00000037606.19_143246676_143263304_1	chr7	-	1806	16	ISM	ENSMUSG00000037606.19	ENST00000525498.5	2546	19	287	3382	287	-3382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCATAGCCAGGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	143263304	143246675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246_143258440_143258705_143258878_143261082_143261168_143262867_143262949_143263275
ENSMUSG00000037606.19_143247509_143263591_1	chr7	-	1915	16	ISM	ENSMUSG00000037606.19	ENST00000525498.5	2546	19	0	4215	0	-4215	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTACCCCTCACCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	143263591	143247508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246_143258440_143258705_143258878_143261082_143261168_143262867_143262949_143263275_143263378_143263509
ENSMUSG00000037606.19_143247568_143263543_1	chr7	-	1931	16	ISM	ENSMUSG00000037606.19	ENST00000263650.12	2914	21	6018	4274	48	-4274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGAGACTATGTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	143263543	143247567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246_143258440_143258705_143258878_143261082_143261168_143262744_143262949_143263275_143263378_143263509
ENSMUSG00000037606.19_143248001_143269496_1	chr7	-	2021	17	ISM	ENSMUSG00000037606.19	ENSMUST00000119499.8	3775	22	24582	5502	65	-4707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGGAAGCCACAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	143269496	143248000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246_143258440_143258705_143258878_143261082_143261168_143262744_143262949_143263275_143263378_143263509_143263591_143267232_143267316_143269402
ENSMUSG00000037608.17_20188215_20218247_1	chr10	+	5299	12	NNC	ENSMUSG00000037608.17	novel	5307	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	20188214	20218247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_20188351_20193753_20193858_20197756_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ENSMUSG00000037608.17_20188215_20218247_2	chr10	+	5302	12	NNC	ENSMUSG00000037608.17	novel	5307	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1002	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	20188214	20218247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_20188346_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ENSMUSG00000037608.17_20188274_20218247_1	chr10	+	5241	12	NNC	ENSMUSG00000037608.17	novel	5307	12	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	20188273	20218247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201839_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ENSMUSG00000037608.17_20188274_20218247_2	chr10	+	5242	12	NIC	ENSMUSG00000037608.17	novel	5307	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	20188273	20218247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ENSMUSG00000037608.17_20199180_20215534_1	chr10	+	2046	9	ISM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	10897	475	1421	-134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAATTTCAAAAAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	20199179	20215534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454
ENSMUSG00000037608.17_20199259_20215606_1	chr10	+	2039	9	ISM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	10976	403	1500	-62	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGACGAAGAGACCATGG	NA	NA	NA	NA	NA	NA	NA	NA	20199258	20215606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454
ENSMUSG00000037608.17_20199466_20215952_1	chr10	+	2048	10	ISM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	11183	57	1707	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAGACTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	20199465	20215952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ENSMUSG00000037608.17_20201069_20216278_1	chr10	+	2042	9	ISM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	12786	-269	3310	269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGTGACTAATTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	20201068	20216278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ENSMUSG00000037608.17_20201133_20216339_1	chr10	+	2039	9	ISM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	12850	-330	3374	330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCAGCAAACATAAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	20201132	20216339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ENSMUSG00000037613.17_143221778_143233708_1	chr7	-	765	4	ISM	ENSMUSG00000037613.17	ENSMUST00000152703.2	1476	6	5901	427	5900	392	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTCTGGTGGAGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	143233708	143221777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143222330_143223718_143223793_143224568_143224681_143233681
ENSMUSG00000037613.17_143221918_143235264_1	chr7	-	795	5	ISM	ENSMUSG00000037613.17	ENSMUST00000152703.2	1476	6	4345	567	4344	252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCCCCACAGTGACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	143235264	143221917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143222330_143223718_143223793_143224568_143224681_143233681_143233811_143235196
ENSMUSG00000037621.9_72200851_72211768_1	chr6	-	458	2	ISM	ENSMUSG00000037621.9	ENSMUST00000042646.8	2355	3	793	17690	793	-17690	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCCCTGGCACGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	72211768	72200850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72200918_72211377
ENSMUSG00000037627.17_36015798_36100297_1	chr15	-	2669	16	ISM	ENSMUSG00000037627.17	ENST00000523287.5	3086	18	6971	0	6971	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGCGTCAGACACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	36100297	36015797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36015916_36025953_36026134_36040698_36040861_36043350_36043420_36046159_36046319_36048881_36049045_36050214_36050385_36052967_36053061_36054829_36055025_36080962_36081065_36082058_36082185_36083772_36083888_36087483_36087615_36092969_36093145_36098360_36098523_36099748
ENSMUSG00000037627.17_36026010_36102002_1	chr15	-	2689	16	ISM	ENSMUSG00000037627.17	ENST00000523287.5	3086	18	5266	10212	5266	-10212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGATCCTTGAACACAGG	NA	NA	NA	NA	NA	NA	NA	NA	36102002	36026009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36026134_36040698_36040861_36043350_36043420_36046159_36046319_36048881_36049045_36050214_36050385_36052967_36053061_36054829_36055025_36080962_36081065_36082058_36082185_36083772_36083888_36087483_36087615_36092969_36093145_36098360_36098523_36099748_36100362_36101872
ENSMUSG00000037627.17_36026094_36107074_1	chr15	-	2634	17	ISM	ENSMUSG00000037627.17	ENST00000523287.5	3086	18	194	10296	194	-10296	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGATTACAACCATCATC	NA	NA	NA	NA	NA	NA	NA	NA	36107074	36026093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36026134_36040698_36040861_36043350_36043420_36046159_36046319_36048881_36049045_36050214_36050385_36052967_36053061_36054829_36055025_36080962_36081065_36082058_36082185_36083772_36083888_36087483_36087615_36092969_36093145_36098360_36098523_36099748_36100362_36101872_36102003_36107045
ENSMUSG00000037627.17_36040743_36107140_1	chr15	-	2616	16	ISM	ENSMUSG00000037627.17	ENST00000523287.5	3086	18	128	24945	128	-24945	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAATGGAGTTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	36107140	36040742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36040861_36043350_36043420_36046159_36046319_36048881_36049045_36050214_36050385_36052967_36053061_36054829_36055025_36080962_36081065_36082058_36082185_36083772_36083888_36087483_36087615_36092969_36093145_36098360_36098523_36099748_36100362_36101872_36102003_36107045
ENSMUSG00000037627.17_36040785_36107215_1	chr15	-	2649	16	ISM	ENSMUSG00000037627.17	ENST00000523287.5	3086	18	53	24987	53	-24987	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGCAATTTCAACGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	36107215	36040784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36040861_36043350_36043420_36046159_36046319_36048881_36049045_36050214_36050385_36052967_36053061_36054829_36055025_36080962_36081065_36082058_36082185_36083772_36083888_36087483_36087615_36092969_36093145_36098360_36098523_36099748_36100362_36101872_36102003_36107045
ENSMUSG00000037627.17_36040849_36107267_1	chr15	-	2637	16	ISM	ENSMUSG00000037627.17	ENST00000523287.5	3086	18	1	25051	1	-25051	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGATATCTTCATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	36107267	36040848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36040861_36043350_36043420_36046159_36046319_36048881_36049045_36050214_36050385_36052967_36053061_36054829_36055025_36080962_36081065_36082058_36082185_36083772_36083888_36087483_36087615_36092969_36093145_36098360_36098523_36099748_36100362_36101872_36102003_36107045
ENSMUSG00000037628.11_46997998_47008977_1	chr14	+	768	8	FSM	ENSMUSG00000037628.11	ENSMUST00000067426.6	917	8	0	149	0	33	multi-exon	FALSE	canonical	NA	NA	NA	NA	2271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAGTTCTCCAGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	46997997	47008977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007292_47007394_47008857
ENSMUSG00000037628.11_47001980_47007393_1	chr14	+	429	4	FSM	ENSMUSG00000037628.11	ENST00000543789.6	429	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAACTGGGCTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	47001979	47007393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_47002037_47002452_47002498_47004632_47004856_47007289
ENSMUSG00000037628.11_47001980_47007393_2	chr14	+	445	4	ISM	ENSMUSG00000037628.11	ENST00000611205.4	532	5	0	1551	0	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAACTGGGCTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	47001979	47007393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_47002037_47002452_47002498_47004632_47004872_47007289
ENSMUSG00000037628.11_47001980_47009126_1	chr14	+	730	6	NIC	ENSMUSG00000037628.11	novel	917	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	3141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCAGCTAGACATACACT	NA	NA	NA	NA	NA	NA	NA	NA	47001979	47009126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_+_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
ENSMUSG00000037628.11_47002453_47008977_2	chr14	+	508	4	ISM	ENSMUSG00000037628.11	ENST00000611205.4	532	5	473	-33	0	33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAGTTCTCCAGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	47002452	47008977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_47002498_47004632_47004872_47007289_47007394_47008857
ENSMUSG00000037628.11_47002453_47008977_3	chr14	+	524	5	FSM	ENSMUSG00000037628.11	ENST00000395577.2	491	5	0	-33	0	33	multi-exon	FALSE	canonical	NA	NA	NA	NA	2820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAGTTCTCCAGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	47002452	47008977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
ENSMUSG00000037652.16_31012078_31020084_1	chr3	-	465	3	ISM	ENSMUSG00000037652.16	ENST00000481639.1	501	4	3474	0	3464	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTCAGTTAATGAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	31020084	31012077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_31012236_31015876_31016021_31019921
ENSMUSG00000037656.10_22966804_23051219_1	chr8	+	1654	8	ISM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	0	8409	0	-8409	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGACAGTGTGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	22966803	23051219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902
ENSMUSG00000037656.10_23025266_23054093_1	chr8	+	1609	8	ISM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	58462	5535	58462	-5535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTTACACAAGAAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	23025265	23054093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044
ENSMUSG00000037656.10_23025330_23054142_1	chr8	+	1594	8	ISM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	58526	5486	58526	-5486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGGCATTTGCACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	23025329	23054142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044
ENSMUSG00000037656.10_23028795_23058385_1	chr8	+	1656	9	ISM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	61991	1243	61991	-1243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGCTCTCCTCATGTA	NA	NA	NA	NA	NA	NA	NA	NA	23028794	23058385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ENSMUSG00000037656.10_23035542_23058604_1	chr8	+	1601	7	ISM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	68738	1024	68738	-1024	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACATCGAGCTGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	23035541	23058604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ENSMUSG00000037656.10_23050629_23058929_1	chr8	+	1618	5	ISM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	83825	699	83825	-699	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGGGTCTGAGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	23050628	23058929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ENSMUSG00000037656.10_23050929_23059037_1	chr8	+	1612	4	ISM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	84125	591	84125	-591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTACCAAAGAAATAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	23050928	23059037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_23051495_23054044_23054231_23055629_23055715_23058262
ENSMUSG00000037656.10_23051071_23059171_1	chr8	+	1604	4	ISM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	84267	457	84267	-457	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCAGCGGCCTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	23051070	23059171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_23051495_23054044_23054231_23055629_23055715_23058262
ENSMUSG00000037656.10_23051316_23059412_1	chr8	+	1600	4	ISM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	84512	216	84512	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCTCTGTAGGACATC	NA	NA	NA	NA	NA	NA	NA	NA	23051315	23059412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_23051495_23054044_23054231_23055629_23055715_23058262
ENSMUSG00000037656.10_23054097_23059628_1	chr8	+	1585	3	ISM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	87293	0	87293	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	23054096	23059628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_23054231_23055629_23055715_23058262
ENSMUSG00000037664.14_143012079_143014733_1	chr7	-	1881	4	FSM	ENSMUSG00000037664.14	ENST00000414822.8	1872	4	0	-9	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACTTGTAGTCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	143014733	143012078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_143012754_143012848_143012988_143013495_143013704_143013874
ENSMUSG00000037664.14_143012079_143014733_2	chr7	-	1886	4	FSM	ENSMUSG00000037664.14	ENST00000430149.3	1871	4	-6	-9	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACTTGTAGTCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	143014733	143012078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_143012759_143012848_143012988_143013495_143013704_143013874
ENSMUSG00000037664.14_143012459_143014380_1	chr7	-	664	3	FSM	ENSMUSG00000037664.14	ENST00000647251.1	640	3	1	-25	1	25	multi-exon	FALSE	canonical	NA	NA	NA	NA	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGATGAGAAAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	143014380	143012458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_143012754_143012848_143012988_143014150
ENSMUSG00000037664.14_143012459_143014380_2	chr7	-	659	3	NNC	ENSMUSG00000037664.14	novel	640	3	NA	NA	1	25	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGATGAGAAAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	143014380	143012458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_143012754_143012853_143012988_143014150
ENSMUSG00000037664.14_143012905_143013634_1	chr7	-	222	2	ISM	ENSMUSG00000037664.14	ENST00000430149.3	1871	4	1093	817	747	-421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGGGGTGGGCGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	143013634	143012904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143012988_143013495
ENSMUSG00000037664.14_143013486_143013899_1	chr7	-	243	2	ISM	ENSMUSG00000037664.14	ENST00000430149.3	1871	4	828	1398	482	-1002	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGGCCCCGCCCCGGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	143013899	143013485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143013704_143013874
ENSMUSG00000037669.16_8258107_8333959_1	chr12	+	937	7	FSM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	0	1800	0	-1800	multi-exon	TRUE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGATTTTCCAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	8258106	8333959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_8258193_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ENSMUSG00000037669.16_8270600_8334079_1	chr12	+	971	6	ISM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	12493	1680	12453	-1680	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGAAAATAGGTACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	8270599	8334079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ENSMUSG00000037669.16_8270631_8334514_1	chr12	+	1292	5	ISM	ENSMUSG00000037669.16	ENSMUST00000169104.3	2626	6	12484	1245	12484	-1245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAAATCACTTCTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	8270630	8334514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8333899
ENSMUSG00000037669.16_8277241_8334200_1	chr12	+	915	5	ISM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	19134	1559	19094	-1559	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGATCCGATGCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	8277240	8334200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ENSMUSG00000037669.16_8288487_8334355_1	chr12	+	903	4	ISM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	30380	1404	30340	-1404	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTAATCGTAATGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	8288486	8334355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8288616_8318363_8318599_8325807_8325891_8333899
ENSMUSG00000037669.16_8288508_8334943_1	chr12	+	1387	3	ISM	ENSMUSG00000037669.16	ENSMUST00000169104.3	2626	6	30361	816	30361	-816	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCCTAAACTTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	8288507	8334943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8288616_8318363_8318599_8333899
ENSMUSG00000037669.16_8288537_8334411_1	chr12	+	909	4	ISM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	30430	1348	30390	-1348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCCACACCCTGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	8288536	8334411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8288616_8318363_8318599_8325807_8325891_8333899
ENSMUSG00000037669.16_8318420_8334583_1	chr12	+	946	3	ISM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	60313	1176	60273	-1176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATAAACCAAACATCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	8318419	8334583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8318599_8325807_8325891_8333899
ENSMUSG00000037669.16_8318420_8334659_1	chr12	+	1022	3	ISM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	60313	1100	60273	-1100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCCACAGGATAACCAACA	NA	NA	NA	NA	NA	NA	NA	NA	8318419	8334659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8318599_8325807_8325891_8333899
ENSMUSG00000037669.16_8318420_8335098_1	chr12	+	1378	2	ISM	ENSMUSG00000037669.16	ENSMUST00000169104.3	2626	6	60273	661	60273	-661	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACTGGACAGCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	8318419	8335098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8318599_8333899
ENSMUSG00000037669.16_8318558_8334675_1	chr12	+	900	3	ISM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	60451	1084	60411	-1084	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGCTCCTCCTGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	8318557	8334675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8318599_8325807_8325891_8333899
ENSMUSG00000037669.16_8325874_8334817_1	chr12	+	935	2	ISM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	67767	942	67727	-942	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGCCACCCATTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	8325873	8334817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_8325891_8333899
ENSMUSG00000037679.10_112566600_112576174_1	chr12	+	2482	15	ISM	ENSMUSG00000037679.10	ENST00000675638.1	3903	21	163	5311	163	-5217	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTCCGCTTCCATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	112566599	112576174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_112566828_112567762_112567879_112567956_112568117_112569485_112569657_112570145_112570288_112570447_112571297_112571806_112571953_112572227_112572290_112572677_112572781_112573406_112573493_112573928_112574030_112574762_112574834_112574910_112575019_112575281_112575353_112576106
ENSMUSG00000037679.10_112566705_112576611_1	chr12	+	2489	16	ISM	ENSMUSG00000037679.10	ENST00000675638.1	3903	21	268	4874	268	-4780	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAGCTGGCTGACTACC	NA	NA	NA	NA	NA	NA	NA	NA	112566704	112576611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_112566828_112567762_112567879_112567956_112568117_112569485_112569657_112570145_112570288_112570447_112571297_112571806_112571953_112572227_112572290_112572677_112572781_112573406_112573493_112573928_112574030_112574762_112574834_112574910_112575019_112575281_112575353_112576106_112576228_112576552
ENSMUSG00000037679.10_112568011_112577200_1	chr12	+	2477	16	ISM	ENSMUSG00000037679.10	ENST00000675638.1	3903	21	1574	4285	1574	-4191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGCTACGGAAGACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	112568010	112577200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_112568117_112569485_112569657_112570145_112570288_112570447_112571297_112571806_112571953_112572227_112572290_112572677_112572781_112573406_112573493_112573928_112574030_112574762_112574834_112574910_112575019_112575281_112575353_112576106_112576228_112576552_112576718_112576895_112576999_112577128
ENSMUSG00000037679.10_112569584_112578007_1	chr12	+	2461	16	ISM	ENSMUSG00000037679.10	ENST00000675638.1	3903	21	3147	3478	3147	-3384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTATGTGGATGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	112569583	112578007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_112569657_112570145_112570288_112570447_112571297_112571806_112571953_112572227_112572290_112572677_112572781_112573406_112573493_112573928_112574030_112574762_112574834_112574910_112575019_112575281_112575353_112576106_112576228_112576552_112576718_112576895_112576999_112577128_112577291_112577909
ENSMUSG00000037679.10_112570174_112578163_1	chr12	+	2516	15	ISM	ENSMUSG00000037679.10	ENST00000675638.1	3903	21	3737	3322	3737	-3228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACGCTACGGATCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	112570173	112578163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_112570288_112570447_112571297_112571806_112571953_112572227_112572290_112572677_112572781_112573406_112573493_112573928_112574030_112574762_112574834_112574910_112575019_112575281_112575353_112576106_112576228_112576552_112576718_112576895_112576999_112577128_112577291_112577909
ENSMUSG00000037679.10_112570547_112578336_1	chr12	+	2476	14	ISM	ENSMUSG00000037679.10	ENST00000675638.1	3903	21	4110	3149	4110	-3055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGGACAGGTCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	112570546	112578336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_112571297_112571806_112571953_112572227_112572290_112572677_112572781_112573406_112573493_112573928_112574030_112574762_112574834_112574910_112575019_112575281_112575353_112576106_112576228_112576552_112576718_112576895_112576999_112577128_112577291_112577909
ENSMUSG00000037679.10_112570630_112578426_1	chr12	+	2483	14	ISM	ENSMUSG00000037679.10	ENST00000675638.1	3903	21	4193	3059	4193	-2965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGAGCAAGCGGAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	112570629	112578426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_112571297_112571806_112571953_112572227_112572290_112572677_112572781_112573406_112573493_112573928_112574030_112574762_112574834_112574910_112575019_112575281_112575353_112576106_112576228_112576552_112576718_112576895_112576999_112577128_112577291_112577909
ENSMUSG00000037679.10_112570811_112581405_1	chr12	+	2480	16	ISM	ENSMUSG00000037679.10	ENST00000675638.1	3903	21	4374	80	4374	14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCGGGGCCAGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	112570810	112581405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_112571297_112571806_112571953_112572227_112572290_112572677_112572781_112573406_112573493_112573928_112574030_112574762_112574834_112574910_112575019_112575281_112575353_112576106_112576228_112576552_112576718_112576895_112576999_112577128_112577291_112577909_112578471_112578981_112579039_112581328
ENSMUSG00000037679.10_112570894_112581479_1	chr12	+	2471	16	ISM	ENSMUSG00000037679.10	ENST00000675638.1	3903	21	4457	6	4457	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGGGCATTGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	112570893	112581479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_112571297_112571806_112571953_112572227_112572290_112572677_112572781_112573406_112573493_112573928_112574030_112574762_112574834_112574910_112575019_112575281_112575353_112576106_112576228_112576552_112576718_112576895_112576999_112577128_112577291_112577909_112578471_112578981_112579039_112581328
ENSMUSG00000037683.15_19240292_19253421_1	chr2	+	514	5	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	33716	48296	33716	-48296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAGCTAAATGCAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	19240291	19253421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19240411_19243451_19243578_19248759_19248829_19249353_19249530_19253397
ENSMUSG00000037683.15_19240347_19253467_1	chr2	+	505	5	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	33771	48250	33771	-48250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACCCCATTATCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	19240346	19253467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19240411_19243451_19243578_19248759_19248829_19249353_19249530_19253397
ENSMUSG00000037683.15_19243450_19297965_1	chr2	+	1200	8	ISM	ENSMUSG00000037683.15	ENST00000376528.8	2234	15	36874	17074	36874	-3752	internal_fragment	TRUE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAGCATTTATTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	19243449	19297965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19243578_19248759_19248829_19258666_19258851_19273883_19274037_19274835_19274942_19290697_19290948_19293635_19293773_19297792
ENSMUSG00000037683.15_19243471_19253574_1	chr2	+	529	4	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	36895	48143	36895	-48143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGGAGACCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	19243470	19253574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19243578_19248759_19248829_19249353_19249530_19253397
ENSMUSG00000037683.15_19248760_19300297_1	chr2	+	1166	8	ISM	ENSMUSG00000037683.15	ENST00000376528.8	2234	15	42184	14742	42184	-1420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCTGGAGGGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	19248759	19300297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19248829_19258666_19258851_19273883_19274037_19274835_19274942_19290697_19290948_19293635_19293773_19297792_19297962_19300199
ENSMUSG00000037683.15_19248783_19258752_1	chr2	+	503	4	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	42207	42965	42207	-42965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAGCCTCAAAAAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	19248782	19258752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19248829_19249353_19249530_19253397_19253593_19258666
ENSMUSG00000037683.15_19249442_19273934_1	chr2	+	518	4	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	42866	27783	42866	-27783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCTGGGATCTGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	19249441	19273934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19249530_19253397_19253593_19258666_19258851_19273883
ENSMUSG00000037683.15_19253442_19274849_1	chr2	+	502	4	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	46866	26868	46866	-26868	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGTTGCTCAGAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	19253441	19274849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19253593_19258666_19258851_19273883_19274037_19274835
ENSMUSG00000037683.15_19253507_19274891_1	chr2	+	479	4	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	46931	26826	46931	-26826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCACTGGCCCTGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	19253506	19274891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19253593_19258666_19258851_19273883_19274037_19274835
ENSMUSG00000037683.15_19253562_19274941_1	chr2	+	474	4	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	46986	26776	46986	-26776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTACACGAACCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	19253561	19274941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19253593_19258666_19258851_19273883_19274037_19274835
ENSMUSG00000037683.15_19258665_19301235_1	chr2	+	1201	8	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	52089	482	52089	-482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGACACATTGTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	19258664	19301235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19258851_19273883_19274037_19274835_19274942_19290697_19290948_19293635_19293773_19297792_19297962_19300199_19300298_19301133
ENSMUSG00000037683.15_19258772_19301652_1	chr2	+	1140	9	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	52196	65	52196	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCCGAGCCAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	19258771	19301652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19258851_19273883_19274037_19274835_19274942_19290697_19290948_19293635_19293773_19297792_19297962_19300199_19300298_19301133_19301236_19301606
ENSMUSG00000037683.15_19273917_19305309_1	chr2	+	1125	9	ISM	ENSMUSG00000037683.15	ENST00000298032.10	2723	18	67341	9730	67341	3592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGTGAAAGAGGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	19273916	19305309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19274037_19274835_19274942_19290697_19290948_19293635_19293773_19297792_19297962_19300199_19300298_19301133_19301236_19301606_19301723_19305282
ENSMUSG00000037683.15_19273976_19305365_1	chr2	+	1122	9	ISM	ENSMUSG00000037683.15	ENST00000298032.10	2723	18	67400	9674	67400	3648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGAAAGAGTGGAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	19273975	19305365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19274037_19274835_19274942_19290697_19290948_19293635_19293773_19297792_19297962_19300199_19300298_19301133_19301236_19301606_19301723_19305282
ENSMUSG00000037683.15_19274020_19305425_1	chr2	+	1138	9	ISM	ENSMUSG00000037683.15	ENST00000298032.10	2723	18	67444	9614	67444	3708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTCGATACTGCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	19274019	19305425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19274037_19274835_19274942_19290697_19290948_19293635_19293773_19297792_19297962_19300199_19300298_19301133_19301236_19301606_19301723_19305282
ENSMUSG00000037683.15_19290748_19314742_1	chr2	+	1198	9	ISM	ENSMUSG00000037683.15	ENST00000298032.10	2723	18	84172	297	84172	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGGGTAGGCTGCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	19290747	19314742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19290948_19293635_19293773_19297792_19297962_19300199_19300298_19301133_19301236_19301606_19301723_19305282_19305481_19308606_19308770_19314727
ENSMUSG00000037683.15_19290835_19314795_1	chr2	+	1164	9	ISM	ENSMUSG00000037683.15	ENST00000298032.10	2723	18	84259	244	84259	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAGCTGGTGAATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	19290834	19314795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19290948_19293635_19293773_19297792_19297962_19300199_19300298_19301133_19301236_19301606_19301723_19305282_19305481_19308606_19308770_19314727
ENSMUSG00000037683.15_19290902_19314851_1	chr2	+	1153	9	ISM	ENSMUSG00000037683.15	ENST00000298032.10	2723	18	84326	188	84326	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTACATCGTGGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	19290901	19314851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19290948_19293635_19293773_19297792_19297962_19300199_19300298_19301133_19301236_19301606_19301723_19305282_19305481_19308606_19308770_19314727
ENSMUSG00000037683.15_19297792_19315052_1	chr2	+	1172	7	ISM	ENSMUSG00000037683.15	ENST00000298032.10	2723	18	91216	-13	91216	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAAACTGTGGATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	19297791	19315052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_19297962_19300199_19300298_19301133_19301236_19301606_19301723_19305282_19305481_19308606_19308770_19314727
ENSMUSG00000037692.15_132739149_132789450_1	chr4	+	1544	7	ISM	ENSMUSG00000037692.15	ENST00000673934.1	6403	9	299	15516	-215	-15103	internal_fragment	TRUE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGCCTGATTACTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	132739148	132789450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132739270_132739500_132739599_132782323_132782515_132782605_132782826_132788091_132788204_132788337_132788376_132788686
ENSMUSG00000037692.15_132739149_132789509_1	chr4	+	1603	7	ISM	ENSMUSG00000037692.15	ENST00000673934.1	6403	9	299	15457	-215	-15044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGCCCTGAGGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	132739148	132789509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132739270_132739500_132739599_132782323_132782515_132782605_132782826_132788091_132788204_132788337_132788376_132788686
ENSMUSG00000037692.15_132782341_132789694_1	chr4	+	1552	5	ISM	ENSMUSG00000037692.15	ENST00000673934.1	6403	9	43491	15272	15537	-14859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCAGGCCCTAGATACC	NA	NA	NA	NA	NA	NA	NA	NA	132782340	132789694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132782515_132782605_132782826_132788091_132788204_132788337_132788376_132788686
ENSMUSG00000037692.15_132782421_132789754_1	chr4	+	1532	5	ISM	ENSMUSG00000037692.15	ENST00000673934.1	6403	9	43571	15212	15617	-14799	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGACCCCCTGCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	132782420	132789754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132782515_132782605_132782826_132788091_132788204_132788337_132788376_132788686
ENSMUSG00000037692.15_132782639_132789888_1	chr4	+	1539	4	ISM	ENSMUSG00000037692.15	ENST00000673934.1	6403	9	43789	15078	15835	-14665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACCCCAAGTACGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	132782638	132789888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132782826_132788091_132788204_132788337_132788376_132788686
ENSMUSG00000037692.15_132782719_132789978_1	chr4	+	1549	4	ISM	ENSMUSG00000037692.15	ENST00000673934.1	6403	9	43869	14988	15915	-14575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTGAGGGTCGCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	132782718	132789978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132782826_132788091_132788204_132788337_132788376_132788686
ENSMUSG00000037692.15_132782787_132790030_1	chr4	+	1533	4	ISM	ENSMUSG00000037692.15	ENST00000673934.1	6403	9	43937	14936	15983	-14523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCCGAGCCCCCACCG	NA	NA	NA	NA	NA	NA	NA	NA	132782786	132790030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132782826_132788091_132788204_132788337_132788376_132788686
ENSMUSG00000037692.15_132788121_132790137_1	chr4	+	1572	3	ISM	ENSMUSG00000037692.15	ENSMUST00000105914.2	5898	6	21317	14416	21317	-14416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGCAAAGGCAAGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	132788120	132790137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132788204_132788337_132788376_132788686
ENSMUSG00000037692.15_132792712_132804956_1	chr4	+	1536	2	ISM	ENSMUSG00000037692.15	ENSMUST00000105914.2	5898	6	25908	-403	25908	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	132792711	132804956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_132793589_132804297
ENSMUSG00000037703.15_130475219_130475650_1	chr2	-	301	2	ISM	ENSMUSG00000037703.15	ENST00000645462.1	3969	6	4317	521	4317	-457	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCAGTCCTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	130475650	130475218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130475410_130475540
ENSMUSG00000037703.15_130475281_130475712_1	chr2	-	301	2	ISM	ENSMUSG00000037703.15	ENST00000645462.1	3969	6	4255	583	4255	-519	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTTCTCTCTTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	130475712	130475280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130475410_130475540
ENSMUSG00000037703.15_130477219_130477987_1	chr2	-	323	3	ISM	ENSMUSG00000037703.15	ENST00000645462.1	3969	6	1980	2521	1980	-2457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCGGCAGCAAACAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	130477987	130477218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130477385_130477692_130477825_130477962
ENSMUSG00000037703.15_130477280_130478046_1	chr2	-	321	3	ISM	ENSMUSG00000037703.15	ENST00000645462.1	3969	6	1921	2582	1921	-2518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGGAGGGTAGGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	130478046	130477279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130477385_130477692_130477825_130477962
ENSMUSG00000037703.15_130478415_130479040_1	chr2	-	311	2	ISM	ENSMUSG00000037703.15	ENSMUST00000089561.10	4169	4	975	3656	927	-3653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGACTGGACAAGTCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	130479040	130478414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130478548_130478862
ENSMUSG00000037703.15_130478462_130479099_1	chr2	-	323	2	ISM	ENSMUSG00000037703.15	ENSMUST00000089561.10	4169	4	916	3703	868	-3700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAATGGGACCCCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	130479099	130478461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130478548_130478862
ENSMUSG00000037706.18_142606531_142620427_1	chr7	+	696	6	ISM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	55	1244	55	-1244	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGACTACCACCATACT	NA	NA	NA	NA	NA	NA	NA	NA	142606530	142620427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397
ENSMUSG00000037706.18_142606659_142620899_1	chr7	+	656	7	ISM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	183	772	183	-772	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGATGAGCTCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	142606658	142620899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883
ENSMUSG00000037706.18_142606738_142620922_1	chr7	+	600	7	ISM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	262	749	262	-749	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGTACCTCATTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	142606737	142620922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883
ENSMUSG00000037706.18_142606777_142621068_1	chr7	+	629	8	FSM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	301	603	301	-603	multi-exon	FALSE	canonical	NA	NA	NA	NA	2681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGTGCTGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	142606776	142621068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ENSMUSG00000037706.18_142616224_142621108_1	chr7	+	648	7	ISM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	9748	563	9748	-563	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCCTTTGCATTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	142616223	142621108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ENSMUSG00000037706.18_142619696_142621342_1	chr7	+	647	5	ISM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	13220	329	13220	-329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGAGCTGGCCCTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	142619695	142621342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ENSMUSG00000037706.18_142620878_142621653_1	chr7	+	698	2	ISM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	14402	18	14402	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGCATGCTAATGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	142620877	142621653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_142620971_142621048
ENSMUSG00000037709.14_58910230_58916382_1	chr6	-	2221	3	ISM	ENSMUSG00000037709.14	ENST00000264344.10	4048	18	64108	0	64108	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGAGGGTTATGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	58916382	58910229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_58911051_58911398_58912697_58916280
ENSMUSG00000037709.14_58910526_58923054_1	chr6	-	2236	6	ISM	ENSMUSG00000037709.14	ENST00000264344.10	4048	18	57436	296	57436	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACCATGGTTTCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	58923054	58910525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_58911051_58911398_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024
ENSMUSG00000037709.14_58910596_58923095_1	chr6	-	2207	6	ISM	ENSMUSG00000037709.14	ENST00000264344.10	4048	18	57395	366	57395	-366	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACGACTCCCCATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	58923095	58910595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_58911051_58911398_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024
ENSMUSG00000037709.14_58910778_58931273_1	chr6	-	2221	8	ISM	ENSMUSG00000037709.14	ENST00000264344.10	4048	18	49217	548	49217	-548	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCTAAGGAAACTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	58931273	58910777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_58911051_58911398_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186
ENSMUSG00000037709.14_58910901_58932224_1	chr6	-	2256	9	ISM	ENSMUSG00000037709.14	ENST00000264344.10	4048	18	48266	671	48266	-671	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTGTAATGTAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	58932224	58910900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_58911051_58911398_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200
ENSMUSG00000037709.14_58910996_58932237_1	chr6	-	2174	9	ISM	ENSMUSG00000037709.14	ENST00000264344.10	4048	18	48253	766	48253	-766	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCTACAAATTTCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	58932237	58910995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_58911051_58911398_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200
ENSMUSG00000037709.14_58911399_58933087_1	chr6	-	2230	9	ISM	ENSMUSG00000037709.14	ENST00000264344.10	4048	18	47403	1169	47403	964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTGTTCTTTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	58933087	58911398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021
ENSMUSG00000037709.14_58911599_58933747_1	chr6	-	2212	10	ISM	ENSMUSG00000037709.14	ENST00000264344.10	4048	18	46743	1369	46743	764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGCAGAATCTAGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	58933747	58911598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638
ENSMUSG00000037709.14_58911897_58951092_1	chr6	-	2278	13	ISM	ENSMUSG00000037709.14	ENST00000264344.10	4048	18	29398	1667	29398	466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCCTGAAAACTCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	58951092	58911896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638_58933844_58942045_58942194_58950139_58950183_58951015
ENSMUSG00000037709.14_58912041_58960956_1	chr6	-	2217	14	ISM	ENSMUSG00000037709.14	ENSMUST00000089860.12	5786	18	40578	2966	19534	322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGTGGCGGGGCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	58960956	58912040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638_58933844_58942045_58942194_58950139_58950183_58951015_58951093_58960873
ENSMUSG00000037709.14_58912115_58961014_1	chr6	-	2201	14	ISM	ENSMUSG00000037709.14	ENSMUST00000089860.12	5786	18	40520	3040	19476	248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCGAGCTGCGCTTATC	NA	NA	NA	NA	NA	NA	NA	NA	58961014	58912114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638_58933844_58942045_58942194_58950139_58950183_58951015_58951093_58960873
ENSMUSG00000037709.14_58912171_58961060_1	chr6	-	2191	14	ISM	ENSMUSG00000037709.14	ENSMUST00000089860.12	5786	18	40474	3096	19430	192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACCCCACCACATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	58961060	58912170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638_58933844_58942045_58942194_58950139_58950183_58951015_58951093_58960873
ENSMUSG00000037709.14_58912403_58980480_1	chr6	-	2209	17	ISM	ENSMUSG00000037709.14	ENSMUST00000089860.12	5786	18	21054	3328	10	-40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTGACTAAGGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	58980480	58912402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638_58933844_58942045_58942194_58950139_58950183_58951015_58951093_58960873_58961061_58964140_58964318_58966728_58966771_58980449
ENSMUSG00000037710.9_71166310_71180641_1	chr10	-	941	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	143	0	143	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGCTCTGTAACGG	NA	NA	NA	NA	NA	NA	NA	NA	71180641	71166309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_71166957_71172043_71172250_71180553
ENSMUSG00000037710.9_71166420_71180784_1	chr10	-	969	3	NNC	ENSMUSG00000037710.9	novel	1084	3	NA	NA	0	-110	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCCTGGTTGAGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	71180784	71166419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_71166957_71172043_71172245_71180553
ENSMUSG00000037710.9_71166504_71180784_1	chr10	-	890	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	0	194	0	-194	multi-exon	FALSE	canonical	NA	NA	NA	NA	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTCGTTAACTTGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	71180784	71166503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_71166957_71172043_71172250_71180553
ENSMUSG00000037712.18_45697104_45699251_1	chr14	-	405	2	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	68324	852	68324	-852	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTCCCAACAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	45699251	45697103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45697481_45699223
ENSMUSG00000037712.18_45697223_45699597_1	chr14	-	425	3	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	67978	971	67978	-971	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTGAACTTTATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	45699597	45697222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45697481_45699223_45699366_45699572
ENSMUSG00000037712.18_45697295_45699640_1	chr14	-	396	3	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	67935	1043	67935	-1043	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATAAAACTCCACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	45699640	45697294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45697481_45699223_45699366_45699572
ENSMUSG00000037712.18_45697405_45702268_1	chr14	-	431	4	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	65307	1153	65307	-1153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGGTGGTTACATATTT	NA	NA	NA	NA	NA	NA	NA	NA	45702268	45697404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180
ENSMUSG00000037712.18_45699653_45704852_1	chr14	-	432	4	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	62723	3401	62723	-3401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGATTGAAGCCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	45704852	45699652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45699698_45702180_45702403_45702540_45702648_45704794
ENSMUSG00000037712.18_45702348_45706773_1	chr14	-	414	5	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	60802	6096	60802	-6096	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCAGACAGTTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	45706773	45702347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696
ENSMUSG00000037712.18_45704857_45713084_1	chr14	-	411	5	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	54491	8605	54491	-8605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGCTACAAGAGCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	45713084	45704856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029
ENSMUSG00000037712.18_45706771_45713506_1	chr14	-	434	4	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	54069	10519	54069	-10519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGATGAAGTTGACGCT	NA	NA	NA	NA	NA	NA	NA	NA	45713506	45706770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45706832_45710228_45710337_45713029_45713133_45713344
ENSMUSG00000037712.18_45713355_45742022_1	chr14	-	420	3	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	25553	17103	25553	-17103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCAAGGGTAAGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	45742022	45713354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45713571_45719888_45720024_45741953
ENSMUSG00000037712.18_45713470_45742159_1	chr14	-	442	3	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	25416	17218	25416	-17218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTGCCCTGTCAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	45742159	45713469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45713571_45719888_45720024_45741953
ENSMUSG00000037712.18_45713543_45742187_1	chr14	-	397	3	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	25388	17291	25388	-17291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTAAAACAATGACCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	45742187	45713542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45713571_45719888_45720024_45741953
ENSMUSG00000037712.18_45719972_45767048_1	chr14	-	453	3	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	527	23720	527	-23720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAGAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	45767048	45719971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45720024_45741953_45742188_45766881
ENSMUSG00000037712.18_45741954_45767421_1	chr14	-	432	3	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	154	45702	154	-45702	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGACCTGCCCTTCGC	NA	NA	NA	NA	NA	NA	NA	NA	45767421	45741953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45742188_45766881_45767049_45767390
ENSMUSG00000037712.18_45742129_45767575_1	chr14	-	411	3	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	0	45877	0	-45877	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGACACACTGGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	45767575	45742128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45742188_45766881_45767049_45767390
ENSMUSG00000037720.17_67418039_67444002_1	chr5	+	1314	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	131	4802	-1	-4802	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACACCTCCTGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	67418038	67444002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ENSMUSG00000037720.17_67421116_67444193_1	chr5	+	1281	6	ISM	ENSMUSG00000037720.17	ENSMUST00000161369.3	6164	7	2968	4611	2968	-4611	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGGGCCATGTAATCA	NA	NA	NA	NA	NA	NA	NA	NA	67421115	67444193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ENSMUSG00000037720.17_67425865_67444549_1	chr5	+	1318	3	ISM	ENSMUSG00000037720.17	ENSMUST00000161369.3	6164	7	7717	4255	7717	-4255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTAGTTGAGGGCAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	67425864	67444549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_67425988_67441482_67441567_67443438
ENSMUSG00000037722.9_45615621_45619051_1	chr14	-	424	3	ISM	ENSMUSG00000037722.9	ENSMUST00000227468.2	1490	5	3890	10	3890	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAATATATTTTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	45619051	45615620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45615944_45618393_45618456_45619012
ENSMUSG00000037722.9_45615877_45622111_1	chr14	-	394	5	FSM	ENSMUSG00000037722.9	ENSMUST00000227468.2	1490	5	830	266	830	-110	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAAATGTTGGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	45622111	45615876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037
ENSMUSG00000037722.9_45619020_45626240_1	chr14	-	388	4	ISM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	178	5229	10	-3253	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAAGGTATGTACTCACA	NA	NA	NA	NA	NA	NA	NA	NA	45626240	45619019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45619141_45620850_45620914_45622037_45622206_45626204
ENSMUSG00000037722.9_45619037_45626292_1	chr14	-	423	4	ISM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	126	5246	-42	-3270	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTATCCATTCATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	45626292	45619036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_45619141_45620850_45620914_45622037_45622206_45626204
ENSMUSG00000037725.9_22658176_22675835_1	chr8	-	2586	9	NNC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAAACAAATGAGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	22675835	22658175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669605_22675699
ENSMUSG00000037730.14_30656632_30673623_1	chr3	+	4738	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	418	399	-154	-399	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTTCTCTACATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	30656631	30673623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ENSMUSG00000037730.14_30657845_30674022_1	chr3	+	4732	7	ISM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	1631	0	1059	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCACTCACTATTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	30657844	30674022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ENSMUSG00000037736.21_66903232_67118571_1	chr5	+	397	5	ISM	ENSMUSG00000037736.21	ENST00000509638.5	1041	7	153	13437	6	-13437	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGGAGTTTGAAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	66903231	67118571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_66903349_67039241_67039312_67111011_67111119_67116930_67116962_67118499
ENSMUSG00000037736.21_67039240_67126496_1	chr5	+	399	5	ISM	ENSMUSG00000037736.21	ENST00000509638.5	1041	7	136161	5512	-16563	-5512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCCCTCTCTCCTCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	67039239	67126496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_67039312_67111011_67111119_67116930_67116962_67118499_67118611_67126418
ENSMUSG00000037740.9_130405662_130409198_1	chr2	+	2861	4	FSM	ENSMUSG00000037740.9	ENSMUST00000145614.2	4278	4	0	1417	0	-1417	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATACTGTGACAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	130405661	130409198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_130405911_130406000_130406148_130406227_130406352_130406857
ENSMUSG00000037740.9_130406045_130409446_1	chr2	+	2816	3	ISM	ENSMUSG00000037740.9	ENSMUST00000145614.2	4278	4	383	1169	383	-1169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCTACAATGTACTTACA	NA	NA	NA	NA	NA	NA	NA	NA	130406044	130409446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130406148_130406227_130406352_130406857
ENSMUSG00000037740.9_130406096_130409502_1	chr2	+	2821	3	ISM	ENSMUSG00000037740.9	ENSMUST00000145614.2	4278	4	434	1113	434	-1113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	130406095	130409502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130406148_130406227_130406352_130406857
ENSMUSG00000037742.15_78385731_78386476_1	chr9	-	647	2	ISM	ENSMUSG00000037742.15	ENST00000610520.5	1735	8	2477	3	2477	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGTCAATGCTGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	78386476	78385730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78386141_78386239
ENSMUSG00000037742.15_78385731_78389006_1	chr9	-	1867	8	FSM	ENSMUSG00000037742.15	ENST00000455918.2	1912	8	53	-8	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	52426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGTCAATGCTGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	78389006	78385730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388847
ENSMUSG00000037742.15_78385810_78386476_1	chr9	-	568	2	ISM	ENSMUSG00000037742.15	ENST00000610520.5	1735	8	2477	82	2477	-71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTTAATGGAAACAACT	NA	NA	NA	NA	NA	NA	NA	NA	78386476	78385809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78386141_78386239
ENSMUSG00000037742.15_78385966_78386816_1	chr9	-	667	3	ISM	ENSMUSG00000037742.15	ENST00000610520.5	1735	8	2137	238	2137	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCAGAACTGTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	78386816	78385965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78386141_78386239_78386475_78386559
ENSMUSG00000037742.15_78386074_78386998_1	chr9	-	652	4	ISM	ENSMUSG00000037742.15	ENST00000610520.5	1735	8	1955	346	1955	-335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGCTGGAGCTGGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	78386998	78386073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905
ENSMUSG00000037742.15_78386316_78387198_1	chr9	-	632	4	ISM	ENSMUSG00000037742.15	ENST00000610520.5	1735	8	1755	588	1755	-577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGATGCTGCCATTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	78387198	78386315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78386475_78386559_78386817_78386905_78387057_78387133
ENSMUSG00000037742.15_78386372_78387244_1	chr9	-	622	4	ISM	ENSMUSG00000037742.15	ENST00000610520.5	1735	8	1709	644	1709	-633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCGATCGTCGTTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	78387244	78386371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78386475_78386559_78386817_78386905_78387057_78387133
ENSMUSG00000037742.15_78386560_78387430_1	chr9	-	705	3	ISM	ENSMUSG00000037742.15	ENST00000610520.5	1735	8	1523	832	1523	-821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACACATTTTTAAGATAG	NA	NA	NA	NA	NA	NA	NA	NA	78387430	78386559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78386817_78386905_78387057_78387133
ENSMUSG00000037742.15_78386762_78387611_1	chr9	-	592	4	ISM	ENSMUSG00000037742.15	ENST00000610520.5	1735	8	1342	1034	1342	-1023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTACCTTTGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	78387611	78386761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78386817_78386905_78387057_78387133_78387431_78387522
ENSMUSG00000037742.15_78386947_78387809_1	chr9	-	604	4	ISM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	1197	1216	1144	-1208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGCGACTGCCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	78387809	78386946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78387057_78387133_78387431_78387522_78387703_78387792
ENSMUSG00000037742.15_78386947_78387860_1	chr9	-	655	4	ISM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	1146	1216	1093	-1208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGCGACTGCCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	78387860	78386946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78387057_78387133_78387431_78387522_78387703_78387792
ENSMUSG00000037742.15_78386947_78387970_1	chr9	-	765	4	ISM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	1036	1216	983	-1208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGCGACTGCCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	78387970	78386946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78387057_78387133_78387431_78387522_78387703_78387792
ENSMUSG00000037742.15_78387197_78389006_1	chr9	-	678	4	ISM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	0	1466	0	-1458	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTAGCATTTGTGCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	78389006	78387196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78387431_78387522_78387703_78387792_78387971_78388920
ENSMUSG00000037750.17_77985486_78046753_1	chr11	+	2485	3	FSM	ENSMUSG00000037750.17	ENSMUST00000073705.12	3258	3	0	773	0	-148	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACTCAGCTATTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	77985485	78046753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_77985618_78033918_78034041_78044522
ENSMUSG00000037750.17_78033919_78046901_1	chr11	+	2501	2	ISM	ENSMUSG00000037750.17	ENSMUST00000155571.2	3358	3	27487	625	27267	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTAAAAATGCATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	78033918	78046901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78034041_78044522
ENSMUSG00000037759.7_45226300_45239336_1	chr14	+	361	3	FSM	ENSMUSG00000037759.7	ENST00000557436.1	487	3	15	111	15	-111	multi-exon	TRUE	canonical	NA	NA	NA	NA	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCGCTCAGTCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	45226299	45239336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_45226377_45227110_45227265_45239206
ENSMUSG00000037759.7_45227195_45239447_1	chr14	+	311	2	FSM	ENSMUSG00000037759.7	ENSMUST00000046891.6	3684	2	1543	1830	910	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGGATGCGCTTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	45227194	45239447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_45227265_45239206
ENSMUSG00000037761.17_158466808_158477309_1	chr2	+	1513	6	ISM	ENSMUSG00000037761.17	ENSMUST00000045644.9	2402	9	0	3822	0	-3822	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGAAGTGGAGAAGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	158466807	158477309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226
ENSMUSG00000037772.14_142086898_142088863_1	chr7	+	156	2	ISM	ENSMUSG00000037772.14	ENSMUST00000038675.7	692	5	149	5621	0	-5621	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAGTGAGGCCCAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	142086897	142088863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_142086932_142088741
ENSMUSG00000037787.15_111679714_111700654_1	chr12	+	1041	5	NNC	ENSMUSG00000037787.15	novel	1065	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTGCAAGTTGAGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	111679713	111700654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_111679853_111689045_111689244_111690773_111690833_111696455_111696547_111700100
ENSMUSG00000037787.15_111679714_111700654_2	chr12	+	1043	5	NNC	ENSMUSG00000037787.15	novel	1065	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTGCAAGTTGAGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	111679713	111700654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_111679853_111689045_111689248_111690780_111690838_111696455_111696547_111700100
ENSMUSG00000037788.15_57730265_57739469_1	chr6	-	1447	2	ISM	ENSMUSG00000037788.15	ENSMUST00000114297.5	2919	5	62675	1015	62652	-1015	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTATTTATATGTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	57739469	57730264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_57731662_57739419
ENSMUSG00000037788.15_57730558_57801957_1	chr6	-	1424	5	FSM	ENSMUSG00000037788.15	ENSMUST00000114297.5	2919	5	187	1308	164	-1308	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATGTGATCCCAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	57801957	57730557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_57731662_57739419_57739557_57751695_57751774_57766961_57767021_57801911
ENSMUSG00000037788.15_57730602_57802018_1	chr6	-	1441	5	FSM	ENSMUSG00000037788.15	ENSMUST00000114297.5	2919	5	126	1352	103	-1352	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTCAGCAAAGCAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	57802018	57730601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_57731662_57739419_57739557_57751695_57751774_57766961_57767021_57801911
ENSMUSG00000037788.15_57730695_57802121_1	chr6	-	1451	5	FSM	ENSMUSG00000037788.15	ENSMUST00000114297.5	2919	5	23	1445	0	-1445	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGATGGGTTTTATGG	NA	NA	NA	NA	NA	NA	NA	NA	57802121	57730694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_57731662_57739419_57739557_57751695_57751774_57766961_57767021_57801911
ENSMUSG00000037801.14_63328191_63352787_1	chr9	-	1202	3	ISM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	79710	34	79710	-34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTTTTGTGATAAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	63352787	63328190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63329252_63332639_63332749_63352755
ENSMUSG00000037801.14_63328257_63352840_1	chr9	-	1189	3	ISM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	79657	100	79657	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGTTTTGTTTTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	63352840	63328256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63329252_63332639_63332749_63352755
ENSMUSG00000037801.14_63328369_63361922_1	chr9	-	1189	4	ISM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	70575	212	70575	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTTTACTGAAGGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	63361922	63328368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63329252_63332639_63332749_63352755_63352872_63361841
ENSMUSG00000037801.14_63328431_63361983_1	chr9	-	1188	4	ISM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	70514	274	70514	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGTGCTGCCACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	63361983	63328430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63329252_63332639_63332749_63352755_63352872_63361841
ENSMUSG00000037801.14_63328596_63387926_1	chr9	-	1189	5	ISM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	44571	439	44571	141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCAGAGTGTGTCTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	63387926	63328595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63329252_63332639_63332749_63352755_63352872_63361841_63362013_63387789
ENSMUSG00000037801.14_63328737_63388044_1	chr9	-	1166	5	ISM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	44453	580	44453	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCAAAGCACAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	63388044	63328736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63329252_63332639_63332749_63352755_63352872_63361841_63362013_63387789
ENSMUSG00000037801.14_63328902_63389969_1	chr9	-	1154	6	ISM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	42528	745	42528	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACCACGGGGGGGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	63389969	63328901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63329252_63332639_63332749_63352755_63352872_63361841_63362013_63387789_63388077_63389848
ENSMUSG00000037801.14_63329117_63415599_1	chr9	-	1203	8	ISM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	16898	960	16898	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGATACCTGTCTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	63415599	63329116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63329252_63332639_63332749_63352755_63352872_63361841_63362013_63387789_63388077_63389848_63389970_63403325_63403518_63415527
ENSMUSG00000037801.14_63329117_63415657_1	chr9	-	1261	8	ISM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	16840	960	16840	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGATACCTGTCTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	63415657	63329116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63329252_63332639_63332749_63352755_63352872_63361841_63362013_63387789_63388077_63389848_63389970_63403325_63403518_63415527
ENSMUSG00000037801.14_63332670_63419569_1	chr9	-	1193	8	ISM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	12928	4513	12928	-3553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGATATGCAAGGCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	63419569	63332669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63332749_63352755_63352872_63361841_63362013_63387789_63388077_63389848_63389970_63403325_63403518_63415527_63415704_63419518
ENSMUSG00000037801.14_63352817_63432006_1	chr9	-	1182	9	ISM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	491	24660	491	-23700	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTCTATTACGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	63432006	63352816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63352872_63361841_63362013_63387789_63388077_63389848_63389970_63403325_63403518_63415527_63415704_63419518_63419603_63431186_63431254_63431977
ENSMUSG00000037801.14_63361885_63432113_1	chr9	-	1191	8	ISM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	384	33728	384	-32768	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGAAAGGGAAAGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	63432113	63361884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63362013_63387789_63388077_63389848_63389970_63403325_63403518_63415527_63415704_63419518_63419603_63431186_63431254_63431977
ENSMUSG00000037801.14_63361936_63432168_1	chr9	-	1195	8	ISM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	329	33779	329	-32819	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGAATTGTAGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	63432168	63361935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63362013_63387789_63388077_63389848_63389970_63403325_63403518_63415527_63415704_63419518_63419603_63431186_63431254_63431977
ENSMUSG00000037801.14_63387823_63432290_1	chr9	-	1207	7	ISM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	207	59666	207	-58706	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCATTGATCCGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	63432290	63387822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63388077_63389848_63389970_63403325_63403518_63415527_63415704_63419518_63419603_63431186_63431254_63431977
ENSMUSG00000037801.14_63387899_63432346_1	chr9	-	1187	7	ISM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	151	59742	151	-58782	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTTTGTGCCTCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	63432346	63387898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63388077_63389848_63389970_63403325_63403518_63415527_63415704_63419518_63419603_63431186_63431254_63431977
ENSMUSG00000037801.14_63387971_63432422_1	chr9	-	1191	7	ISM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	75	59814	75	-58854	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATGCTGATGGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	63432422	63387970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63388077_63389848_63389970_63403325_63403518_63415527_63415704_63419518_63419603_63431186_63431254_63431977
ENSMUSG00000037805.16_28547445_28550007_1	chr17	+	823	6	NNC	ENSMUSG00000037805.16	novel	830	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15630	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGCCTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	28547444	28550007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_28547593_28547784_28547860_28547940_28548022_28548354_28548497_28549498_28549672_28549803
ENSMUSG00000037805.16_28547445_28550007_2	chr17	+	825	6	NNC	ENSMUSG00000037805.16	novel	830	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGCCTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	28547444	28550007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_28547593_28547784_28547860_28547940_28548017_28548347_28548497_28549498_28549672_28549803
ENSMUSG00000037805.16_28547542_28550007_1	chr17	+	728	6	NNC	ENSMUSG00000037805.16	novel	830	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGCCTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	28547541	28550007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549503_28549672_28549803
ENSMUSG00000037813.14_158037878_158042899_1	chr2	-	928	3	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	19627	0	19627	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTGAACCACCACACCAG	NA	NA	NA	NA	NA	NA	NA	NA	158042899	158037877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158038574_158042073_158042287_158042880
ENSMUSG00000037813.14_158038017_158045039_1	chr2	-	940	4	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	17487	139	17487	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCTCCTGGCCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	158045039	158038016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158038574_158042073_158042287_158042880_158043004_158044992
ENSMUSG00000037813.14_158038075_158045088_1	chr2	-	931	4	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	17438	197	17438	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGTCAGGGGCACCCCC	NA	NA	NA	NA	NA	NA	NA	NA	158045088	158038074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158038574_158042073_158042287_158042880_158043004_158044992
ENSMUSG00000037813.14_158038179_158046635_1	chr2	-	926	5	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	15891	301	15891	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGATCATGTGTTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	158046635	158038178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158038574_158042073_158042287_158042880_158043004_158044992_158045132_158046579
ENSMUSG00000037813.14_158038284_158047643_1	chr2	-	937	6	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	14883	406	14883	-406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAAGTGGCACTCATAG	NA	NA	NA	NA	NA	NA	NA	NA	158047643	158038283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158038574_158042073_158042287_158042880_158043004_158044992_158045132_158046579_158046729_158047620
ENSMUSG00000037813.14_158038427_158050395_1	chr2	-	933	7	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	12131	549	12131	-549	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCATGAAGCTCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	158050395	158038426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158038574_158042073_158042287_158042880_158043004_158044992_158045132_158046579_158046729_158047620_158047720_158050332
ENSMUSG00000037813.14_158038475_158050461_1	chr2	-	951	7	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	12065	597	12065	-597	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCTACCTGAAGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	158050461	158038474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158038574_158042073_158042287_158042880_158043004_158044992_158045132_158046579_158046729_158047620_158047720_158050332
ENSMUSG00000037813.14_158038540_158050504_1	chr2	-	929	7	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	12022	662	12022	-662	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCAGCTCAGCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	158050504	158038539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158038574_158042073_158042287_158042880_158043004_158044992_158045132_158046579_158046729_158047620_158047720_158050332
ENSMUSG00000037813.14_158042166_158055304_1	chr2	-	933	8	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	7222	4288	7222	-4288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGCCAGGCTGACACAC	NA	NA	NA	NA	NA	NA	NA	NA	158055304	158042165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158042287_158042880_158043004_158044992_158045132_158046579_158046729_158047620_158047720_158050332_158050508_158053528_158053634_158055282
ENSMUSG00000037813.14_158042226_158055349_1	chr2	-	918	8	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	7177	4348	7177	-4348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGCAGGTGAGATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	158055349	158042225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158042287_158042880_158043004_158044992_158045132_158046579_158046729_158047620_158047720_158050332_158050508_158053528_158053634_158055282
ENSMUSG00000037813.14_158042935_158057817_1	chr2	-	930	8	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	4709	5057	4709	-5057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACAGTAGAGAAAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	158057817	158042934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158043004_158044992_158045132_158046579_158046729_158047620_158047720_158050332_158050508_158053528_158053634_158055282_158055407_158057747
ENSMUSG00000037813.14_158045107_158058414_1	chr2	-	922	8	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	4112	7229	4112	-7229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACAACCTTGTGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	158058414	158045106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158045132_158046579_158046729_158047620_158047720_158050332_158050508_158053528_158053634_158055282_158055407_158057747_158057931_158058352
ENSMUSG00000037813.14_158046689_158058555_1	chr2	-	929	7	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	3971	8811	3971	-8811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGGTGCTGAGGGACCCG	NA	NA	NA	NA	NA	NA	NA	NA	158058555	158046688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158046729_158047620_158047720_158050332_158050508_158053528_158053634_158055282_158055407_158057747_158057931_158058352
ENSMUSG00000037813.14_158047702_158058691_1	chr2	-	944	6	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	3835	9824	3835	-9824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACCTTCGCCAGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	158058691	158047701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158047720_158050332_158050508_158053528_158053634_158055282_158055407_158057747_158057931_158058352
ENSMUSG00000037813.14_158050431_158058793_1	chr2	-	930	5	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	3733	12553	3733	-12553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGCCCTCAGAAACCAC	NA	NA	NA	NA	NA	NA	NA	NA	158058793	158050430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158050508_158053528_158053634_158055282_158055407_158057747_158057931_158058352
ENSMUSG00000037813.14_158053608_158058950_1	chr2	-	931	4	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	3576	15730	3576	-15730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGTGATTGATGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	158058950	158053607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158053634_158055282_158055407_158057747_158057931_158058352
ENSMUSG00000037813.14_158055373_158059073_1	chr2	-	938	3	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	3453	17495	3453	-17495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTCAACCGCAGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	158059073	158055372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158055407_158057747_158057931_158058352
ENSMUSG00000037813.14_158057863_158059212_1	chr2	-	928	2	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	3314	19985	3314	-19985	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCAGGTCCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	158059212	158057862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158057931_158058352
ENSMUSG00000037813.14_158058815_158062365_1	chr2	-	931	2	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	161	20937	161	-20937	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACTGCAGTGCGACAG	NA	NA	NA	NA	NA	NA	NA	NA	158062365	158058814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158059698_158062317
ENSMUSG00000037813.14_158058872_158062427_1	chr2	-	936	2	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	99	20994	99	-20994	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGGAGAAGCCCTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	158062427	158058871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158059698_158062317
ENSMUSG00000037813.14_158058930_158062472_1	chr2	-	923	2	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	54	21052	54	-21052	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGGCCTGCTGGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	158062472	158058929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_158059698_158062317
ENSMUSG00000037815.8_35251966_35312802_1	chr18	+	724	6	ISM	ENSMUSG00000037815.8	ENSMUST00000042345.8	3733	18	54	75030	54	-74848	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATCCTCTATACTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	35251965	35312802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737
ENSMUSG00000037815.8_35285652_35312932_1	chr18	+	787	5	ISM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	-2	74718	-2	-74718	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCATCAGATGATGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	35285651	35312932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737
ENSMUSG00000037815.8_35287463_35385734_1	chr18	+	2194	15	ISM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	1809	1916	1809	-1916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCAACATCTGCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	35287462	35385734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668
ENSMUSG00000037815.8_35287519_35315460_1	chr18	+	690	5	ISM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	1865	72190	1865	-72190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGCGCCTGGAAAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	35287518	35315460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402
ENSMUSG00000037815.8_35307390_35386772_1	chr18	+	2230	15	ISM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	21736	878	21736	-878	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGAACCTTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	35307389	35386772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385814_35386600
ENSMUSG00000037815.8_35308202_35356577_1	chr18	+	725	5	ISM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	22548	31073	22548	-31073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGGAATATGCCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	35308201	35356577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475
ENSMUSG00000037815.8_35312736_35386958_1	chr18	+	2215	13	ISM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	27082	692	27082	-692	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1974	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGGGTTCTGAAAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	35312735	35386958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385814_35386600
ENSMUSG00000037815.8_35315403_35387132_1	chr18	+	2117	12	ISM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	29749	518	29749	-518	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATATTTCTAGCTATATT	NA	NA	NA	NA	NA	NA	NA	NA	35315402	35387132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385814_35386600
ENSMUSG00000037815.8_35315403_35387248_1	chr18	+	2233	12	ISM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	29749	402	29749	-402	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1920	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGGGGTGAGCGCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	35315402	35387248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385814_35386600
ENSMUSG00000037815.8_35315412_35377064_1	chr18	+	736	6	ISM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	29758	10586	29758	-10586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGGGCTGGATCGCACT	NA	NA	NA	NA	NA	NA	NA	NA	35315411	35377064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007
ENSMUSG00000037815.8_35315522_35377165_1	chr18	+	727	6	ISM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	29868	10485	29868	-10485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGAAGGTTCTGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	35315521	35377165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007
ENSMUSG00000037815.8_35348407_35377773_1	chr18	+	767	7	ISM	ENSMUSG00000037815.8	ENST00000540387.5	2616	12	20	10051	20	-9877	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGCAGCTGTGGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	35348406	35377773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35348465_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749
ENSMUSG00000037815.8_35355119_35387350_1	chr18	+	2130	11	ISM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	69465	300	6732	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGACGGTCTGGAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	35355118	35387350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385814_35386600
ENSMUSG00000037815.8_35355141_35387438_1	chr18	+	2196	11	ISM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	69487	212	6754	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGCTTTCTTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	35355140	35387438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385814_35386600
ENSMUSG00000037815.8_35355179_35387513_1	chr18	+	2233	11	ISM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	69525	137	6792	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2648	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTAATGGAGTTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	35355178	35387513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385814_35386600
ENSMUSG00000037815.8_35356544_35382807_1	chr18	+	741	6	ISM	ENSMUSG00000037815.8	ENST00000540387.5	2616	12	8157	5017	8157	-4843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGGACCAGTGTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	35356543	35382807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754
ENSMUSG00000037815.8_35368693_35383969_1	chr18	+	753	6	ISM	ENSMUSG00000037815.8	ENST00000540387.5	2616	12	20306	3855	20306	-3681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGCAAGCTGGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	35368692	35383969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898
ENSMUSG00000037815.8_35377101_35385767_1	chr18	+	758	6	ISM	ENSMUSG00000037815.8	ENST00000540387.5	2616	12	28714	2057	28714	-1883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGAACCTTGGTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	35377100	35385767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668
ENSMUSG00000037815.8_35377158_35386772_1	chr18	+	852	7	ISM	ENSMUSG00000037815.8	ENST00000540387.5	2616	12	28771	1052	28771	-878	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGAACCTTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	35377157	35386772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ENSMUSG00000037815.8_35382754_35386958_1	chr18	+	836	5	ISM	ENSMUSG00000037815.8	ENST00000540387.5	2616	12	34367	866	34367	-692	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGGGTTCTGAAAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	35382753	35386958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ENSMUSG00000037815.8_35384218_35387132_1	chr18	+	717	3	ISM	ENSMUSG00000037815.8	ENST00000540387.5	2616	12	35831	692	35831	-518	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATATTTCTAGCTATATT	NA	NA	NA	NA	NA	NA	NA	NA	35384217	35387132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35384325_35385668_35385804_35386657
ENSMUSG00000037815.8_35384218_35387248_1	chr18	+	833	3	ISM	ENSMUSG00000037815.8	ENST00000540387.5	2616	12	35831	576	35831	-402	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGGGGTGAGCGCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	35384217	35387248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35384325_35385668_35385804_35386657
ENSMUSG00000037816.11_50571917_50587805_1	chr13	+	1776	10	NNC	ENSMUSG00000037816.11	novel	1798	10	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAGACACATTCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	50571916	50587805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_50572024_50573875_50573914_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586211_50586383_50586463_50586592_50587333
ENSMUSG00000037822.13_65605960_65650403_1	chr5	-	2447	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	340	1773	0	1186	multi-exon	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGATGGCCTCACACAG	NA	NA	NA	NA	NA	NA	NA	NA	65650403	65605959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
ENSMUSG00000037822.13_65606104_65650465_1	chr5	-	2365	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	278	1917	-62	1042	multi-exon	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTCTCACAAAGGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	65650465	65606103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
ENSMUSG00000037822.13_65606267_65650640_1	chr5	-	2377	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	103	2080	103	879	multi-exon	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTACAGGATTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	65650640	65606266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
ENSMUSG00000037824.7_40629237_40633114_1	chr14	-	1015	3	ISM	ENSMUSG00000037824.7	ENST00000341863.10	948	7	23122	-483	23122	483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTCTGGGACCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	40633114	40629236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_40630087_40631541_40631662_40633069
ENSMUSG00000037824.7_40629445_40637410_1	chr14	-	1007	5	ISM	ENSMUSG00000037824.7	ENST00000372164.7	2338	7	18826	995	18826	275	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGGGGAGCACATCACC	NA	NA	NA	NA	NA	NA	NA	NA	40637410	40629444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336
ENSMUSG00000037824.7_40629494_40637462_1	chr14	-	1010	5	ISM	ENSMUSG00000037824.7	ENST00000372164.7	2338	7	18774	1044	18774	226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCCTCAGCCATGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	40637462	40629493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336
ENSMUSG00000037824.7_40629550_40637507_1	chr14	-	999	5	ISM	ENSMUSG00000037824.7	ENST00000372164.7	2338	7	18729	1100	18729	170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTACCCTCGTGCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	40637507	40629549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336
ENSMUSG00000037824.7_40629720_40656273_1	chr14	-	1105	7	FSM	ENSMUSG00000037824.7	ENST00000372164.7	2338	7	-37	1270	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCCTTATGGAGCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	40656273	40629719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40656144
ENSMUSG00000037824.7_40629783_40688836_1	chr14	-	791	6	NNC	ENSMUSG00000037824.7	novel	799	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTATGTGGAGTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	40688836	40629782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_40630087_40631541_40631656_40633069_40633115_40635318_40635445_40656144_40656243_40688732
ENSMUSG00000037824.7_40629783_40688836_2	chr14	-	797	6	FSM	ENSMUSG00000037824.7	ENST00000481124.5	799	6	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTATGTGGAGTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	40688836	40629782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40656144_40656243_40688732
ENSMUSG00000037824.7_40629915_40656273_1	chr14	-	790	7	FSM	ENSMUSG00000037824.7	ENST00000341863.10	948	7	-37	195	5	-132	multi-exon	FALSE	canonical	NA	NA	NA	NA	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGTCTTCGGCATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	40656273	40629914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40638759_40638907_40640586_40640638_40656144
ENSMUSG00000037824.7_40629928_40656273_1	chr14	-	777	7	FSM	ENSMUSG00000037824.7	ENST00000341863.10	948	7	-37	208	5	-145	multi-exon	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACAACCAGACCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	40656273	40629927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40638759_40638907_40640586_40640638_40656144
ENSMUSG00000037826.6_57487640_57502212_1	chr6	-	1091	5	NNC	ENSMUSG00000037826.6	novel	1098	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAGAAGGCCACCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	57502212	57487639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_57487835_57491958_57492097_57492577_57492744_57499733_57499835_57501721
ENSMUSG00000037826.6_57487640_57502212_2	chr6	-	1098	5	FSM	ENSMUSG00000037826.6	ENST00000295908.11	1098	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAGAAGGCCACCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	57502212	57487639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_57487835_57491958_57492104_57492577_57492744_57499733_57499835_57501721
ENSMUSG00000037826.6_57487640_57502212_3	chr6	-	1097	5	NNC	ENSMUSG00000037826.6	novel	1098	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAGAAGGCCACCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	57502212	57487639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_57487835_57491958_57492104_57492577_57492744_57499733_57499835_57501722
ENSMUSG00000037845.15_50679551_50684144_1	chr9	+	2139	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	15	504	15	201	multi-exon	TRUE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTGCCCTTTGATCCC	NA	NA	NA	NA	NA	NA	NA	NA	50679550	50684144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
ENSMUSG00000037845.15_50679745_50684268_1	chr9	+	2069	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	209	380	0	325	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCTCTGTATCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	50679744	50684268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
ENSMUSG00000037845.15_50681505_50684648_1	chr9	+	2186	3	ISM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	1969	0	1760	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGAGCATGTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	50681504	50684648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_50681614_50681931_50682091_50682730
ENSMUSG00000037845.15_50681556_50684648_1	chr9	+	2135	3	ISM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	2020	0	1811	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGAGCATGTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	50681555	50684648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_50681614_50681931_50682091_50682730
ENSMUSG00000037846.19_67815545_67853677_1	chr10	+	758	7	ISM	ENSMUSG00000037846.19	ENST00000373789.8	3076	12	25	25261	0	-24451	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAATGCTGGAGACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	67815544	67853677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841520_67853635
ENSMUSG00000037846.19_67833411_67862462_1	chr10	+	722	7	ISM	ENSMUSG00000037846.19	ENST00000373789.8	3076	12	17891	16476	17866	-15666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCCTATTGACAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	67833410	67862462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_67833454_67837753_67837808_67839033_67839152_67841329_67841520_67853635_67853731_67861342_67861450_67862347
ENSMUSG00000037847.15_18618572_18619644_1	chr19	+	171	2	ISM	ENSMUSG00000037847.15	ENST00000376808.8	478	5	1691	2856	1691	-2856	internal_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCCCTCTCTCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	18618571	18619644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_18618636_18619537
ENSMUSG00000037847.15_18619538_18622500_1	chr19	+	189	2	ISM	ENSMUSG00000037847.15	ENST00000376808.8	478	5	2657	0	2657	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAAAGTGTTCTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	18619537	18622500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_18619645_18622418
ENSMUSG00000037852.9_65045576_65064525_1	chr8	-	1340	6	ISM	ENSMUSG00000037852.9	ENSMUST00000048967.9	2117	9	81563	0	81563	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGGTGTGCATTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	65064525	65045575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_65046256_65047930_65048050_65050493_65050594_65059636_65059777_65062081_65062265_65064407
ENSMUSG00000037852.9_65045576_65064527_1	chr8	-	1336	6	NNC	ENSMUSG00000037852.9	novel	2117	9	NA	NA	81561	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGGTGTGCATTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	65064527	65045575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_65046256_65047936_65048050_65050493_65050594_65059636_65059777_65062081_65062265_65064407
ENSMUSG00000037852.9_65045864_65072504_1	chr8	-	1340	8	ISM	ENSMUSG00000037852.9	ENSMUST00000048967.9	2117	9	73584	288	73584	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGTACTGCGAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	65072504	65045863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_65046256_65047930_65048050_65050493_65050594_65059636_65059777_65062081_65062265_65064407_65064526_65070571_65070740_65072384
ENSMUSG00000037852.9_65046057_65145785_1	chr8	-	1328	9	NNC	ENSMUSG00000037852.9	novel	2117	9	NA	NA	303	-481	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTTTTGATCATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	65145785	65046056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_65046256_65047930_65048045_65050493_65050594_65059636_65059777_65062081_65062265_65064407_65064526_65070571_65070740_65072384_65072582_65145676
ENSMUSG00000037852.9_65046091_65145761_1	chr8	-	1275	9	FSM	ENSMUSG00000037852.9	ENSMUST00000048967.9	2117	9	327	515	327	-515	multi-exon	FALSE	canonical	NA	NA	NA	NA	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGGTTGTGTGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	65145761	65046090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_65046256_65047930_65048050_65050493_65050594_65059636_65059777_65062081_65062265_65064407_65064526_65070571_65070740_65072384_65072582_65145676
ENSMUSG00000037852.9_65046149_65145827_1	chr8	-	1283	9	FSM	ENSMUSG00000037852.9	ENSMUST00000048967.9	2117	9	261	573	261	-573	multi-exon	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAACTAATTGCTTTAATC	NA	NA	NA	NA	NA	NA	NA	NA	65145827	65046148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_65046256_65047930_65048050_65050493_65050594_65059636_65059777_65062081_65062265_65064407_65064526_65070571_65070740_65072384_65072582_65145676
ENSMUSG00000037852.9_65046208_65145873_1	chr8	-	1270	9	FSM	ENSMUSG00000037852.9	ENSMUST00000048967.9	2117	9	215	632	215	-632	multi-exon	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAATTGATGGAGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	65145873	65046207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_65046256_65047930_65048050_65050493_65050594_65059636_65059777_65062081_65062265_65064407_65064526_65070571_65070740_65072384_65072582_65145676
ENSMUSG00000037852.9_65050494_65146088_1	chr8	-	1318	7	ISM	ENSMUSG00000037852.9	ENSMUST00000048967.9	2117	9	0	4918	0	-4918	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTATTCTTATTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	65146088	65050493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_65050594_65059636_65059777_65062081_65062265_65064407_65064526_65070571_65070740_65072384_65072582_65145676
ENSMUSG00000037855.16_67723352_67733339_1	chr10	-	1684	3	ISM	ENSMUSG00000037855.16	ENSMUST00000064656.8	4259	5	15153	1419	15153	-1419	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGTATTTGTGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	67733339	67723351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_67724922_67725782_67725821_67733263
ENSMUSG00000037855.16_67723869_67745397_1	chr10	-	1639	4	ISM	ENSMUSG00000037855.16	ENSMUST00000064656.8	4259	5	3095	1936	3095	-1936	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCACCCCCAAGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	67745397	67723868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_67724922_67725782_67725821_67733263_67733445_67745030
ENSMUSG00000037855.16_67724139_67745653_1	chr10	-	1625	4	ISM	ENSMUSG00000037855.16	ENSMUST00000064656.8	4259	5	2839	2206	2839	-2206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGAAATAAAAGCAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	67745653	67724138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_67724922_67725782_67725821_67733263_67733445_67745030
ENSMUSG00000037855.16_67724193_67745766_1	chr10	-	1684	4	ISM	ENSMUSG00000037855.16	ENSMUST00000064656.8	4259	5	2726	2260	2726	-2260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGGTGTGCGCTACCAC	NA	NA	NA	NA	NA	NA	NA	NA	67745766	67724192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_67724922_67725782_67725821_67733263_67733445_67745030
ENSMUSG00000037857.17_77576998_77600702_1	chr11	+	563	3	FSM	ENSMUSG00000037857.17	ENST00000579665.1	562	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATACATATATATA	NA	NA	NA	NA	NA	NA	NA	NA	77576997	77600702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_77577334_77596334_77596368_77600508
ENSMUSG00000037857.17_77576998_77600702_2	chr11	+	551	2	NNC	ENSMUSG00000037857.17	novel	562	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATACATATATATA	NA	NA	NA	NA	NA	NA	NA	NA	77576997	77600702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_77577336_77600489
ENSMUSG00000037857.17_77576998_77600702_5	chr11	+	547	2	NNC	ENSMUSG00000037857.17	novel	562	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATACATATATATA	NA	NA	NA	NA	NA	NA	NA	NA	77576997	77600702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_77577351_77600508
ENSMUSG00000037868.16_67374047_67376779_1	chr10	+	1378	2	FSM	ENSMUSG00000037868.16	ENSMUST00000048289.14	2965	2	348	1239	347	-1239	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCCTCCTGCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	67374046	67376779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_67374220_67375574
ENSMUSG00000037868.16_67374151_67376898_1	chr10	+	1393	2	FSM	ENSMUSG00000037868.16	ENSMUST00000048289.14	2965	2	452	1120	-362	-1120	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTCCCCATGATCCCG	NA	NA	NA	NA	NA	NA	NA	NA	67374150	67376898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_67374220_67375574
ENSMUSG00000037876.18_67025555_67054180_1	chr10	+	574	5	ISM	ENSMUSG00000037876.18	ENST00000542921.5	8098	25	3882	37555	3882	-37555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATAGCAGCATACCCG	NA	NA	NA	NA	NA	NA	NA	NA	67025554	67054180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055
ENSMUSG00000037876.18_67051098_67054795_1	chr10	+	582	5	ISM	ENSMUSG00000037876.18	ENST00000542921.5	8098	25	29425	36940	29425	-36940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGCTGAGCATGAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	67051097	67054795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732
ENSMUSG00000037876.18_67056337_67060839_1	chr10	+	575	3	ISM	ENSMUSG00000037876.18	ENST00000542921.5	8098	25	34664	30896	34664	-30896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCGCTCCGTGTCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	67056336	67060839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_67056415_67059787_67059961_67060515
ENSMUSG00000037876.18_67059878_67061045_1	chr10	+	613	2	ISM	ENSMUSG00000037876.18	ENST00000542921.5	8098	25	38205	30690	38205	-30690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCTTTCGAAGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	67059877	67061045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_67059961_67060515
ENSMUSG00000037876.18_67065771_67074639_1	chr10	+	570	5	ISM	ENSMUSG00000037876.18	ENST00000542921.5	8098	25	44098	17096	44098	-17096	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCATTGTCACTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	67065770	67074639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585
ENSMUSG00000037876.18_67076593_67081872_1	chr10	+	579	5	ISM	ENSMUSG00000037876.18	ENST00000542921.5	8098	25	54920	9863	54920	-9863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGTCAATGTCCTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	67076592	67081872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812
ENSMUSG00000037876.18_67090263_67091715_1	chr10	+	589	2	ISM	ENSMUSG00000037876.18	ENST00000542921.5	8098	25	68590	20	68590	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAATTGCTGGATTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	67090262	67091715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_67090363_67091226
ENSMUSG00000037892.14_49707800_49708901_1	chr3	-	258	3	ISM	ENSMUSG00000037892.14	ENSMUST00000035931.13	5168	4	2864	10055	2830	-8930	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGATAGACAGGCTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	49708901	49707799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_49707897_49707988_49708075_49708826
ENSMUSG00000037894.14_137570334_137571844_1	chr3	+	389	4	ISM	ENSMUSG00000037894.14	ENSMUST00000173790.8	437	5	-40	424	0	-424	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATACGTGGAGATGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	137570333	137571844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771
ENSMUSG00000037894.14_137570334_137572147_1	chr3	+	447	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	86	536	0	-121	multi-exon	FALSE	canonical	NA	NA	NA	NA	3068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATCCCACACATCCACA	NA	NA	NA	NA	NA	NA	NA	NA	137570333	137572147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
ENSMUSG00000037894.14_137570455_137572147_1	chr3	+	326	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	207	536	81	-121	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATCCCACACATCCACA	NA	NA	NA	NA	NA	NA	NA	NA	137570454	137572147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
ENSMUSG00000037894.14_137570455_137572268_1	chr3	+	447	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	207	415	81	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATTCCAGTGGACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	137570454	137572268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
ENSMUSG00000037894.14_137571302_137572393_1	chr3	+	470	3	ISM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	1054	290	928	125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAAGTGTTACTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	137571301	137572393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_137571395_137571771_137571902_137572146
ENSMUSG00000037894.14_137571378_137572418_1	chr3	+	419	3	ISM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	1130	265	1004	150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTATTGATTCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	137571377	137572418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_137571395_137571771_137571902_137572146
ENSMUSG00000037894.14_137571774_137572441_1	chr3	+	420	2	NNC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	1400	-138	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTGATTGAGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	137571773	137572441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_137571899_137572146
ENSMUSG00000037894.14_137571818_137572579_1	chr3	+	514	2	NNC	ENSMUSG00000037894.14	novel	810	5	NA	NA	1444	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3763	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGCTTTAAACTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	137571817	137572579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_137571899_137572146
ENSMUSG00000037894.14_137571823_137572579_1	chr3	+	512	2	ISM	ENSMUSG00000037894.14	ENSMUST00000174561.8	810	5	1489	0	1449	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGCTTTAAACTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	137571822	137572579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_137571902_137572146
ENSMUSG00000037894.14_137571857_137572579_1	chr3	+	475	2	NNC	ENSMUSG00000037894.14	novel	810	5	NA	NA	1483	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGCTTTAAACTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	137571856	137572579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_137571899_137572146
ENSMUSG00000037894.14_137571867_137572579_1	chr3	+	468	2	ISM	ENSMUSG00000037894.14	ENSMUST00000174561.8	810	5	1533	0	1493	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGCTTTAAACTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	137571866	137572579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_137571902_137572146
ENSMUSG00000037902.19_129450957_129458392_1	chr2	+	783	3	NNC	ENSMUSG00000037902.19	novel	845	3	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACCAACAGCCAGCGATCA	NA	NA	NA	NA	NA	NA	NA	NA	129450956	129458392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_129451174_129457368_129457685_129458142
ENSMUSG00000037902.19_129450957_129458392_2	chr2	+	785	3	FSM	ENSMUSG00000037902.19	ENST00000381580.5	845	3	60	0	60	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACCAACAGCCAGCGATCA	NA	NA	NA	NA	NA	NA	NA	NA	129450956	129458392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_129451174_129457366_129457685_129458142
ENSMUSG00000037902.19_129450957_129458392_3	chr2	+	779	3	NNC	ENSMUSG00000037902.19	novel	845	3	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACCAACAGCCAGCGATCA	NA	NA	NA	NA	NA	NA	NA	NA	129450956	129458392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_129451168_129457366_129457685_129458142
ENSMUSG00000037905.14_125518814_125534213_1	chr5	+	3070	3	FSM	ENSMUSG00000037905.14	ENSMUST00000049040.14	6473	3	182	3221	182	-3221	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACTTCAACCGGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	125518813	125534213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_125518957_125528733_125528837_125531389
ENSMUSG00000037916.15_4057497_4062665_1	chr19	-	1514	10	NNC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2073	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAACTTTGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	4062665	4057496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4057666_4057769_4057916_4058053_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ENSMUSG00000037916.15_4057497_4062665_2	chr19	-	1514	10	NNC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAACTTTGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	4062665	4057496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4057666_4057775_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ENSMUSG00000037916.15_4057497_4062665_3	chr19	-	1520	10	FSM	ENSMUSG00000037916.15	ENSMUST00000042497.14	1661	10	141	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAACTTTGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	4062665	4057496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ENSMUSG00000037916.15_4057497_4062759_1	chr19	-	1607	10	NNC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAACTTTGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	4062759	4057496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060003_4061101_4061273_4061345_4061429_4062550
ENSMUSG00000037922.14_135759415_135809689_1	chr3	-	1647	10	ISM	ENSMUSG00000037922.14	ENSMUST00000196159.5	2849	16	222118	291	130794	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTTTGAAATGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	135809689	135759414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_135759908_135760166_135760232_135761510_135761564_135763156_135763187_135769873_135769938_135772086_135772266_135788930_135789000_135799045_135799352_135806041_135806351_135809610
ENSMUSG00000037922.14_135759521_135919723_1	chr3	-	1674	11	ISM	ENSMUSG00000037922.14	ENSMUST00000196159.5	2849	16	112084	397	20760	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTAAATGACCATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	135919723	135759520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_135759908_135760166_135760232_135761510_135761564_135763156_135763187_135769873_135769938_135772086_135772266_135788930_135789000_135799045_135799352_135806041_135806351_135809610_135809690_135919590
ENSMUSG00000037922.14_135759683_135799166_1	chr3	-	806	8	ISM	ENSMUSG00000037922.14	ENSMUST00000198206.2	2538	16	232620	473	141317	-268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCACAACTTTTGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	135799166	135759682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_135759908_135760166_135760232_135761510_135761564_135763156_135763187_135769873_135769938_135772086_135772266_135788930_135789000_135799045
ENSMUSG00000037922.14_135759698_135948722_1	chr3	-	1715	13	ISM	ENSMUSG00000037922.14	ENSMUST00000196159.5	2849	16	83085	574	-8239	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	920	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCATTCATTTTTACC	NA	NA	NA	NA	NA	NA	NA	NA	135948722	135759697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_135759908_135760166_135760232_135761510_135761564_135763156_135763187_135769873_135769938_135772086_135772266_135788930_135789000_135799045_135799352_135806041_135806351_135809610_135809690_135919590_135919788_135940374_135940481_135948674
ENSMUSG00000037922.14_135759803_135948783_1	chr3	-	1671	13	ISM	ENSMUSG00000037922.14	ENSMUST00000196159.5	2849	16	83024	679	-8300	-388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	868	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGTGTGCCTTTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	135948783	135759802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_135759908_135760166_135760232_135761510_135761564_135763156_135763187_135769873_135769938_135772086_135772266_135788930_135789000_135799045_135799352_135806041_135806351_135809610_135809690_135919590_135919788_135940374_135940481_135948674
ENSMUSG00000037922.14_135760167_135953531_1	chr3	-	1736	13	ISM	ENSMUSG00000037922.14	ENSMUST00000196159.5	2849	16	78276	1043	-13048	-752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACATGGTTTCTTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	135953531	135760166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_135760232_135761510_135761564_135763156_135763187_135769873_135769938_135772086_135772266_135788930_135789000_135799045_135799352_135806041_135806351_135809610_135809690_135919590_135919788_135940374_135940481_135948674_135948815_135953392
ENSMUSG00000037922.14_135761536_135919787_1	chr3	-	1250	8	NNC	ENSMUSG00000037922.14	novel	1374	10	NA	NA	20696	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAACAGTCCATTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	135919787	135761535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_135761583_135769873_135769938_135772086_135772266_135788930_135789000_135799045_135799352_135806041_135806351_135809610_135809690_135919590
ENSMUSG00000037922.14_135763151_135960687_1	chr3	-	1678	12	ISM	ENSMUSG00000037922.14	ENST00000444316.2	2785	16	29332	3736	-20204	-1615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAAGGATTAAAACAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	135960687	135763150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_135763187_135769873_135769938_135772086_135772266_135788930_135789000_135799045_135799352_135806041_135806351_135809610_135809690_135919590_135919788_135940374_135940481_135948674_135948815_135953392_135953532_135960633
ENSMUSG00000037922.14_135772119_135989644_1	chr3	-	1669	11	ISM	ENSMUSG00000037922.14	ENST00000444316.2	2785	16	375	12704	375	-10583	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAAGAGTGGTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	135989644	135772118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_135772266_135788930_135789000_135799045_135799352_135806041_135806351_135809610_135809690_135919590_135919788_135940374_135940481_135948674_135948815_135953392_135953532_135960633_135960786_135989619
ENSMUSG00000037922.14_135772178_135989705_1	chr3	-	1671	11	ISM	ENSMUSG00000037922.14	ENST00000444316.2	2785	16	314	12763	314	-10642	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCAAGAATGGGAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	135989705	135772177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_135772266_135788930_135789000_135799045_135799352_135806041_135806351_135809610_135809690_135919590_135919788_135940374_135940481_135948674_135948815_135953392_135953532_135960633_135960786_135989619
ENSMUSG00000037922.14_135772223_135989761_1	chr3	-	1682	11	ISM	ENSMUSG00000037922.14	ENST00000444316.2	2785	16	258	12808	258	-10687	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTGACTACTGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	135989761	135772222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_135772266_135788930_135789000_135799045_135799352_135806041_135806351_135809610_135809690_135919590_135919788_135940374_135940481_135948674_135948815_135953392_135953532_135960633_135960786_135989619
ENSMUSG00000037922.14_135799143_135989958_1	chr3	-	1670	9	ISM	ENSMUSG00000037922.14	ENST00000444316.2	2785	16	61	39728	61	-37607	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCGGTCTTTCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	135989958	135799142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_135799352_135806041_135806351_135809610_135809690_135919590_135919788_135940374_135940481_135948674_135948815_135953392_135953532_135960633_135960786_135989619
ENSMUSG00000037922.14_135799200_135990010_1	chr3	-	1665	9	ISM	ENSMUSG00000037922.14	ENST00000444316.2	2785	16	9	39785	9	-37664	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAGACAATGAGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	135990010	135799199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_135799352_135806041_135806351_135809610_135809690_135919590_135919788_135940374_135940481_135948674_135948815_135953392_135953532_135960633_135960786_135989619
ENSMUSG00000037926.16_77106996_77107341_1	chr11	+	226	2	FSM	ENSMUSG00000037926.16	ENST00000582084.1	231	2	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCCCTCCAGGCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	77106995	77107341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_77107119_77107238
ENSMUSG00000037926.16_77239239_77308357_1	chr11	+	567	6	FSM	ENSMUSG00000037926.16	ENST00000324677.12	590	6	22	1	22	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGGCTTTTGATATC	NA	NA	NA	NA	NA	NA	NA	NA	77239238	77308357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_77239380_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291
ENSMUSG00000037926.16_77239239_77308358_1	chr11	+	562	6	NNC	ENSMUSG00000037926.16	novel	590	6	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGGCTTTTGATATCT	NA	NA	NA	NA	NA	NA	NA	NA	77239238	77308358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_77239380_77283881_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291
ENSMUSG00000037926.16_77239239_77308358_2	chr11	+	561	6	NNC	ENSMUSG00000037926.16	novel	590	6	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGGCTTTTGATATCT	NA	NA	NA	NA	NA	NA	NA	NA	77239238	77308358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_77239380_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307303_77308291
ENSMUSG00000037926.16_77312064_77340688_1	chr11	+	1266	7	ISM	ENSMUSG00000037926.16	ENST00000649863.1	4463	14	72945	5658	72847	-5658	internal_fragment	TRUE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCACCTACTGCCAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	77312063	77340688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77312237_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213
ENSMUSG00000037926.16_77316400_77340993_1	chr11	+	1253	5	ISM	ENSMUSG00000037926.16	ENST00000649863.1	4463	14	77281	5353	77183	-5353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAATACGCCCCACGCCT	NA	NA	NA	NA	NA	NA	NA	NA	77316399	77340993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213
ENSMUSG00000037926.16_77332781_77344513_1	chr11	+	1237	3	ISM	ENSMUSG00000037926.16	ENST00000649863.1	4463	14	93662	1833	93564	-1833	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTGTCTGACCACACAC	NA	NA	NA	NA	NA	NA	NA	NA	77332780	77344513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77332885_77340213_77341049_77344215
ENSMUSG00000037926.16_77340283_77344699_1	chr11	+	1250	2	ISM	ENSMUSG00000037926.16	ENST00000649863.1	4463	14	101164	1647	101066	-1647	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCCCCACATTATCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	77340282	77344699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77341049_77344215
ENSMUSG00000037926.16_77340374_77344780_1	chr11	+	1240	2	ISM	ENSMUSG00000037926.16	ENST00000649863.1	4463	14	101255	1566	101157	-1566	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTACCCCAGAACATTCA	NA	NA	NA	NA	NA	NA	NA	NA	77340373	77344780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77341049_77344215
ENSMUSG00000037926.16_77340516_77344957_1	chr11	+	1275	2	ISM	ENSMUSG00000037926.16	ENST00000649863.1	4463	14	101397	1389	101299	-1389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGTAGAAGTAAGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	77340515	77344957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77341049_77344215
ENSMUSG00000037933.17_49495067_49533228_1	chr13	+	1893	5	ISM	ENSMUSG00000037933.17	ENSMUST00000048544.14	6309	7	6	7267	0	-7267	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTCTTCACTGCCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	49495066	49533228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483
ENSMUSG00000037933.17_49495189_49533285_1	chr13	+	1828	5	ISM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	117	7217	117	-7210	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCTGATCGCCATCATC	NA	NA	NA	NA	NA	NA	NA	NA	49495188	49533285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483
ENSMUSG00000037933.17_49495266_49533368_1	chr13	+	1834	5	ISM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	194	7134	194	-7127	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCCTCGCAGGAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	49495265	49533368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483
ENSMUSG00000037933.17_49528704_49536597_1	chr13	+	1861	5	ISM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	33632	3905	33632	-3898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTGCGCATGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	49528703	49536597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518
ENSMUSG00000037933.17_49531489_49538624_1	chr13	+	1906	5	ISM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	36417	1878	36417	-1871	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	49531488	49538624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49538446
ENSMUSG00000037933.17_49531554_49538627_1	chr13	+	1844	5	ISM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	36482	1875	36482	-1868	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGCTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	49531553	49538627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49538446
ENSMUSG00000037933.17_49531639_49538698_1	chr13	+	1830	5	ISM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	36567	1804	36567	-1797	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTTCCACAGCCGCCG	NA	NA	NA	NA	NA	NA	NA	NA	49531638	49538698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49538446
ENSMUSG00000037933.17_49532683_49539106_1	chr13	+	1850	4	ISM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	37611	1396	37611	-1389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTATTCCAATTCTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	49532682	49539106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49533510_49534046_49534199_49536518_49536730_49538446
ENSMUSG00000037933.17_49532920_49539344_1	chr13	+	1851	4	ISM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	37848	1158	37848	-1151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGAATTGTTTTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	49532919	49539344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49533510_49534046_49534199_49536518_49536730_49538446
ENSMUSG00000037933.17_49533437_49539868_1	chr13	+	1858	4	ISM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	38365	634	38365	-627	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTCTTGCTTGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	49533436	49539868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49533510_49534046_49534199_49536518_49536730_49538446
ENSMUSG00000037933.17_49534131_49540002_1	chr13	+	1835	3	ISM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	39059	500	39059	-493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCCAGCCTAAAAAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	49534130	49540002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49534199_49536518_49536730_49538446
ENSMUSG00000037933.17_49536565_49540170_1	chr13	+	1889	2	ISM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	41493	332	41493	-325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTATTTATTTGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	49536564	49540170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49536730_49538446
ENSMUSG00000037935.17_99099873_99104884_1	chr11	-	1467	3	ISM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	16959	0	16410	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCAGTGTTTTTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	99104884	99099872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99101104_99103945_99104157_99104859
ENSMUSG00000037935.17_99099873_99104935_1	chr11	-	1518	3	ISM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	16908	0	16359	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCAGTGTTTTTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	99104935	99099872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99101104_99103945_99104157_99104859
ENSMUSG00000037935.17_99100056_99104953_1	chr11	-	1353	3	ISM	ENSMUSG00000037935.17	ENST00000431889.6	1431	9	16341	-660	16341	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCCATAGATCAGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	99104953	99100055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99101104_99103945_99104157_99104859
ENSMUSG00000037935.17_99100716_99110217_1	chr11	-	1046	5	ISM	ENSMUSG00000037935.17	ENST00000431889.6	1431	9	11077	0	11077	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCAACGTCTGAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	99110217	99100715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045
ENSMUSG00000037935.17_99100818_99110572_1	chr11	-	1076	6	ISM	ENSMUSG00000037935.17	ENST00000431889.6	1431	9	10722	102	10722	77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTCTGTGTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	99110572	99100817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440
ENSMUSG00000037935.17_99100818_99121295_1	chr11	-	1426	11	FSM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	548	945	-1	77	multi-exon	FALSE	canonical	NA	NA	NA	NA	6092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTCTGTGTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	99121295	99100817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ENSMUSG00000037935.17_99101041_99115920_1	chr11	-	991	8	ISM	ENSMUSG00000037935.17	ENST00000431889.6	1431	9	5374	325	5374	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGACAAGGAGAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	99115920	99101040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863
ENSMUSG00000037935.17_99103940_99119375_1	chr11	-	930	7	ISM	ENSMUSG00000037935.17	ENST00000642459.1	1000	8	1923	0	1919	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCTCCACACCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	99119375	99103939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99119322
ENSMUSG00000037935.17_99103967_99121591_1	chr11	-	1415	10	ISM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	252	4094	252	-27	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCATCCCGATGGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	99121591	99103966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ENSMUSG00000037935.17_99104011_99121295_1	chr11	-	979	8	ISM	ENSMUSG00000037935.17	ENST00000431889.6	1431	9	-1	3295	-1	-71	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAGCAAGTGGCGAACA	NA	NA	NA	NA	NA	NA	NA	NA	99121295	99104010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99121227
ENSMUSG00000037935.17_99104019_99121644_1	chr11	-	1416	10	ISM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	199	4146	199	-79	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCTGAGGAAGAGCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	99121644	99104018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ENSMUSG00000037935.17_99104070_99121694_1	chr11	-	1415	10	ISM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	149	4197	149	-130	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGGGAGAAGGAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	99121694	99104069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ENSMUSG00000037935.17_99104089_99121295_1	chr11	-	796	7	ISM	ENSMUSG00000037935.17	ENST00000578044.6	1181	8	33	3194	-1	-149	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCGCAAGAGGCAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	99121295	99104088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99121227
ENSMUSG00000037935.17_99104089_99121295_2	chr11	-	847	8	NNC	ENSMUSG00000037935.17	novel	1000	8	NA	NA	-1	-149	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	928	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCGCAAGAGGCAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	99121295	99104088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99119323_99119375_99121227
ENSMUSG00000037935.17_99104089_99121295_3	chr11	-	848	8	FSM	ENSMUSG00000037935.17	ENST00000642459.1	1000	8	3	149	-1	-149	multi-exon	FALSE	canonical	NA	NA	NA	NA	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCGCAAGAGGCAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	99121295	99104088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99119322_99119375_99121227
ENSMUSG00000037935.17_99104856_99121843_1	chr11	-	1481	9	ISM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	0	4983	0	-916	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTCCATTCACTGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	99121843	99104855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ENSMUSG00000037936.16_125354151_125377494_1	chr5	-	1773	10	ISM	ENSMUSG00000037936.16	ENSMUST00000086075.13	2521	13	40664	0	40641	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTTCTGTGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	125377494	125354150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_125354930_125358168_125358298_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400
ENSMUSG00000037936.16_125354332_125380208_1	chr5	-	1765	11	ISM	ENSMUSG00000037936.16	ENSMUST00000086075.13	2521	13	37950	181	37927	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTAGAGGTATGGGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	125380208	125354331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_125354930_125358168_125358298_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145
ENSMUSG00000037936.16_125354398_125380271_1	chr5	-	1762	11	ISM	ENSMUSG00000037936.16	ENSMUST00000086075.13	2521	13	37887	247	37864	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACCACTGTACGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	125380271	125354397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_125354930_125358168_125358298_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145
ENSMUSG00000037936.16_125354510_125380292_1	chr5	-	1671	11	ISM	ENSMUSG00000037936.16	ENSMUST00000086075.13	2521	13	37866	359	37843	-357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCCTCTTGTGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	125380292	125354509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_125354930_125358168_125358298_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145
ENSMUSG00000037936.16_125354630_125381416_1	chr5	-	1704	12	ISM	ENSMUSG00000037936.16	ENSMUST00000086075.13	2521	13	36742	479	36719	-477	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCTGGCCCTGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	125381416	125354629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_125354930_125358168_125358298_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258
ENSMUSG00000037936.16_125354851_125418083_1	chr5	-	1746	13	FSM	ENSMUSG00000037936.16	ENSMUST00000086075.13	2521	13	75	700	52	-698	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTCTCTCAGCGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	125418083	125354850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_125354930_125358168_125358298_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ENSMUSG00000037938.5_128971620_128975218_1	chr2	+	489	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	0	836	0	-836	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCCTTGGACTTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	128971619	128975218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
ENSMUSG00000037938.5_128971724_128975268_1	chr2	+	435	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	104	786	104	-786	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTCGCCTAGAAGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	128971723	128975268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
ENSMUSG00000037938.5_128972321_128975505_1	chr2	+	477	2	ISM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	701	549	701	-549	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTAGGATGACTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	128972320	128975505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_128972487_128975194
ENSMUSG00000037949.9_122004940_122086163_1	chr9	-	1085	5	ISM	ENSMUSG00000037949.9	ENSMUST00000214409.2	2384	13	37249	-18	18562	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCAAATGTTTCAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	122086163	122004939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_122005545_122030836_122030954_122080212_122080342_122082001_122082194_122086121
ENSMUSG00000037949.9_122004959_122086215_1	chr9	-	1118	5	ISM	ENSMUSG00000037949.9	ENSMUST00000214409.2	2384	13	37197	1	18510	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCTTCTCCAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	122086215	122004958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_122005545_122030836_122030954_122080212_122080342_122082001_122082194_122086121
ENSMUSG00000037949.9_122004959_122086272_1	chr9	-	1175	5	ISM	ENSMUSG00000037949.9	ENSMUST00000214409.2	2384	13	37140	1	18453	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCTTCTCCAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	122086272	122004958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_122005545_122030836_122030954_122080212_122080342_122082001_122082194_122086121
ENSMUSG00000037949.9_122080213_122104683_1	chr9	-	1567	9	FSM	ENSMUSG00000037949.9	ENST00000396091.7	1609	9	42	0	42	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCAAAGTGTCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	122104683	122080212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_122080342_122082001_122082194_122086121_122086305_122087982_122088058_122088600_122088657_122090149_122090720_122092735_122092856_122100264_122100400_122104576
ENSMUSG00000037949.9_122086149_122101480_1	chr9	-	1160	7	ISM	ENSMUSG00000037949.9	ENSMUST00000216670.2	2108	12	21960	8417	3245	-5936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGAGAAGGAAATGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	122101480	122086148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_122086305_122087982_122088058_122088600_122088657_122090149_122090720_122092735_122092856_122100264_122100400_122101432
ENSMUSG00000037949.9_122086244_122101498_1	chr9	-	1083	7	ISM	ENSMUSG00000037949.9	ENSMUST00000216670.2	2108	12	21942	8512	3227	-6031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTGGCTGCAGCGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	122101498	122086243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_122086305_122087982_122088058_122088600_122088657_122090149_122090720_122092735_122092856_122100264_122100400_122101432
ENSMUSG00000037949.9_122087983_122101600_1	chr9	-	1124	6	ISM	ENSMUSG00000037949.9	ENSMUST00000216670.2	2108	12	21840	10251	3125	-7770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTGTAACGGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	122101600	122087982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_122088058_122088600_122088657_122090149_122090720_122092735_122092856_122100264_122100400_122101432
ENSMUSG00000037949.9_122088601_122104683_1	chr9	-	1186	6	ISM	ENSMUSG00000037949.9	ENSMUST00000216670.2	2108	12	18757	10869	42	-8388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGTTAATATCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	122104683	122088600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_122088657_122090149_122090720_122092735_122092856_122100264_122100400_122101432_122101631_122104576
ENSMUSG00000037949.9_122090188_122123412_1	chr9	-	1181	6	ISM	ENSMUSG00000037949.9	ENSMUST00000216670.2	2108	12	28	12456	0	-9975	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTATCGATATGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	122123412	122090187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_122090720_122092735_122092856_122100264_122100400_122101432_122101631_122104576_122104730_122123369
ENSMUSG00000037949.9_122090358_122123489_1	chr9	-	1088	6	ISM	ENSMUSG00000037949.9	ENSMUST00000216670.2	2108	12	-49	12626	0	-10145	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCATTTGTGTGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	122123489	122090357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_122090720_122092735_122092856_122100264_122100400_122101432_122101631_122104576_122104730_122123369
ENSMUSG00000037957.15_110704414_110770673_1	chr12	+	2576	4	FSM	ENSMUSG00000037957.15	ENST00000335263.9	2586	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTGTTTATCCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	110704413	110770673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_110704712_110745729_110745913_110759547_110760808_110769838
ENSMUSG00000037957.15_110704643_110761462_1	chr12	+	2167	3	FSM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	217	0	217	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTTGTAGAACTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	110704642	110761462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_110704712_110745729_110745913_110759547
ENSMUSG00000037958.14_76936204_76939192_1	chr11	-	1391	2	ISM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	30069	1086	30069	-1086	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCACCGGGTGGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	76939192	76936203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_76937581_76939178
ENSMUSG00000037958.14_76936318_76940117_1	chr11	-	1391	3	ISM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	29144	1200	29144	-1200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGGCTTCATGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	76940117	76936317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_76937581_76939178_76939288_76940098
ENSMUSG00000037958.14_76936378_76940166_1	chr11	-	1380	3	ISM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	29095	1260	29095	-1260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTTCTTGGTTTTACTC	NA	NA	NA	NA	NA	NA	NA	NA	76940166	76936377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_76937581_76939178_76939288_76940098
ENSMUSG00000037958.14_76936476_76940255_1	chr11	-	1371	3	ISM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	29006	1358	29006	-1358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTGGAGAGTATTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	76940255	76936475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_76937581_76939178_76939288_76940098
ENSMUSG00000037958.14_76936720_76967570_1	chr11	-	1455	6	ISM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	1691	1602	1691	-1602	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGGCAGTGAGCAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	76967570	76936719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479
ENSMUSG00000037958.14_76936829_76969261_1	chr11	-	1403	7	FSM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	0	1711	0	-1711	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCCAGCAAAGCAAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	76969261	76936828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
ENSMUSG00000037960.12_49356426_49358823_1	chr13	-	565	4	NNC	ENSMUSG00000037960.12	novel	804	6	NA	NA	10679	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	49358823	49356425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_49356712_49357193_49357266_49357404_49357456_49358667
ENSMUSG00000037960.12_49356426_49361522_1	chr13	-	615	5	ISM	ENSMUSG00000037960.12	ENSMUST00000048946.7	804	6	7980	-1	7980	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	49361522	49356425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667_49358822_49361479
ENSMUSG00000037960.12_49356597_49369502_1	chr13	-	634	6	FSM	ENSMUSG00000037960.12	ENSMUST00000048946.7	804	6	0	170	0	-170	multi-exon	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACCCAGATCCCGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	49369502	49356596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667_49358822_49361479_49361623_49369412
ENSMUSG00000037965.16_10955134_10965235_1	chr16	-	1043	8	ISM	ENSMUSG00000037965.16	ENSMUST00000037633.16	3825	23	29022	678	29022	-678	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGCACTGACCAGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	10965235	10955133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132
ENSMUSG00000037965.16_10963074_10969086_1	chr16	-	1013	8	ISM	ENSMUSG00000037965.16	ENSMUST00000037633.16	3825	23	25171	8618	25171	-8618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAGAAACAAATGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	10969086	10963073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002
ENSMUSG00000037965.16_10967113_10974134_1	chr16	-	1029	6	ISM	ENSMUSG00000037965.16	ENSMUST00000037633.16	3825	23	20123	12657	20123	-12657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGAGCATCATGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	10974134	10967112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883
ENSMUSG00000037966.16_49341001_49348400_1	chr13	+	373	3	ISM	ENSMUSG00000037966.16	ENSMUST00000049022.15	1187	4	40	1320	0	-1320	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAAGCTGGACTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	49341000	49348400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49341114_49347211_49347441_49348369
ENSMUSG00000037966.16_49347211_49348533_1	chr13	+	394	2	ISM	ENSMUSG00000037966.16	ENSMUST00000120733.8	1321	5	6210	1187	6210	-1187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGGCAGGGGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	49347210	49348533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49347441_49348369
ENSMUSG00000037966.16_49347319_49349235_1	chr13	+	442	3	ISM	ENSMUSG00000037966.16	ENSMUST00000120733.8	1321	5	6318	485	6318	-485	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACCTGAGACATGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	49347318	49349235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49347441_49348369_49348534_49349079
ENSMUSG00000037966.16_49348417_49349353_1	chr13	+	391	2	ISM	ENSMUSG00000037966.16	ENSMUST00000120733.8	1321	5	7416	367	7416	-367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTGGACTTGACGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	49348416	49349353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_49348534_49349079
ENSMUSG00000037977.7_107219661_107225314_1	chr9	+	413	4	FSM	ENSMUSG00000037977.7	ENST00000441239.5	526	4	113	0	113	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACCAGAGCCACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	107219660	107225314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107219729_107223344_107223371_107224016_107224165_107225143
ENSMUSG00000037979.14_124912284_124916757_1	chr5	-	1147	3	ISM	ENSMUSG00000037979.14	ENSMUST00000036206.14	2473	4	22731	802	22731	-802	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGAAGGAGCTATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	124916757	124912283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124913356_124916006_124916049_124916724
ENSMUSG00000037979.14_124912337_124916814_1	chr5	-	1151	3	ISM	ENSMUSG00000037979.14	ENSMUST00000036206.14	2473	4	22674	855	22674	-855	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCATGGCTGAATCACTA	NA	NA	NA	NA	NA	NA	NA	NA	124916814	124912336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124913356_124916006_124916049_124916724
ENSMUSG00000037979.14_124912390_124916871_1	chr5	-	1155	3	ISM	ENSMUSG00000037979.14	ENSMUST00000036206.14	2473	4	22617	908	22617	-908	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATAGCTTGCTTCTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	124916871	124912389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124913356_124916006_124916049_124916724
ENSMUSG00000037979.14_124912611_124939317_1	chr5	-	1173	4	FSM	ENSMUSG00000037979.14	ENSMUST00000036206.14	2473	4	171	1129	171	-1129	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTCAGGGACAGACCGAA	NA	NA	NA	NA	NA	NA	NA	NA	124939317	124912610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_124913356_124916006_124916049_124916724_124916872_124939078
ENSMUSG00000037992.17_98828544_98863375_1	chr11	+	1294	6	ISM	ENSMUSG00000037992.17	ENST00000425707.7	2938	7	3	2390	0	-1612	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGCCGCTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	98828543	98863375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98828706_98841070_98841622_98860982_98861144_98861318_98861496_98862407_98862613_98863337
ENSMUSG00000037992.17_98841226_98864342_1	chr11	+	1195	6	ISM	ENSMUSG00000037992.17	ENST00000425707.7	2938	7	12685	1423	-9328	-645	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGGACAGTCGGGGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	98841225	98864342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98841622_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ENSMUSG00000037992.17_98841287_98864396_1	chr11	+	1188	6	ISM	ENSMUSG00000037992.17	ENST00000425707.7	2938	7	12746	1369	-9267	-591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTAGCTGTAGCCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	98841286	98864396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98841622_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ENSMUSG00000037992.17_98841334_98864520_1	chr11	+	1265	6	ISM	ENSMUSG00000037992.17	ENST00000425707.7	2938	7	12793	1245	-9220	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTGTGACCTGTCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	98841333	98864520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98841622_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ENSMUSG00000037992.17_98850656_98861026_1	chr11	+	476	4	ISM	ENSMUSG00000037992.17	ENST00000394086.7	1978	8	102	3961	102	-3961	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAGTGCTCAGAGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	98850655	98861026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98850797_98857172_98857322_98858870_98859013_98860982
ENSMUSG00000037992.17_98850726_98861068_1	chr11	+	448	4	ISM	ENSMUSG00000037992.17	ENST00000394086.7	1978	8	172	3919	172	-3919	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCATTGAGAAGGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	98850725	98861068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98850797_98857172_98857322_98858870_98859013_98860982
ENSMUSG00000037992.17_98851580_98865290_1	chr11	+	2418	8	FSM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	342	478	342	302	multi-exon	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCTACCCACCAATAATC	NA	NA	NA	NA	NA	NA	NA	NA	98851579	98865290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ENSMUSG00000037993.9_110274872_110278229_1	chr8	-	401	3	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	11188	224	11188	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCAGTCCTGATGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	110278229	110274871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110275116_110276405_110276528_110278194
ENSMUSG00000037993.9_110274967_110280876_1	chr8	-	1245	9	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	8541	319	8541	-319	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAGGACTCCGCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	110280876	110274966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779
ENSMUSG00000037993.9_110280119_110281612_1	chr8	-	356	4	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	7805	5471	7805	-5471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTAGCCAATGTGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	110281612	110280118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110280186_110280779_110280893_110281275_110281384_110281544
ENSMUSG00000037993.9_110280827_110281824_1	chr8	-	364	4	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	7593	6179	7593	-6179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGTCAGGGAGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	110281824	110280826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110280893_110281275_110281384_110281544_110281662_110281751
ENSMUSG00000037993.9_110281319_110282342_1	chr8	-	364	4	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	7075	6671	7075	-6671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATCATGTTTGTCATCG	NA	NA	NA	NA	NA	NA	NA	NA	110282342	110281318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110281384_110281544_110281662_110281751_110281863_110282271
ENSMUSG00000037993.9_110281616_110282708_1	chr8	-	355	4	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	6709	6968	6709	-6968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGCGCTGGCGGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	110282708	110281615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110281662_110281751_110281863_110282271_110282413_110282651
ENSMUSG00000037993.9_110282318_110283055_1	chr8	-	348	3	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	6362	7670	6362	-7670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATCCCTGGGCGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	110283055	110282317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110282413_110282651_110282838_110282988
ENSMUSG00000037993.9_110282710_110283545_1	chr8	-	355	3	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	5872	8062	5872	-8062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGAGGCCCACGAGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	110283545	110282709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110282838_110282988_110283176_110283505
ENSMUSG00000037993.9_110282766_110283601_1	chr8	-	355	3	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	5816	8118	5816	-8118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCGCGAGTCCCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	110283601	110282765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110282838_110282988_110283176_110283505
ENSMUSG00000037993.9_110283127_110285328_1	chr8	-	353	4	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	4089	8479	4089	-8479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGCTGACCCAGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	110285328	110283126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110283176_110283505_110283644_110284829_110284943_110285275
ENSMUSG00000037993.9_110283575_110285613_1	chr8	-	353	4	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	3804	8927	3804	-8927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGATCCTGGAGCAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	110285613	110283574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110283644_110284829_110284943_110285275_110285384_110285550
ENSMUSG00000037993.9_110284909_110286228_1	chr8	-	363	4	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	3189	10261	3189	-10261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAGGAGACATAATGGGT	NA	NA	NA	NA	NA	NA	NA	NA	110286228	110284908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110284943_110285275_110285384_110285550_110285713_110286169
ENSMUSG00000037993.9_110285651_110287035_1	chr8	-	361	4	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	2382	11003	2382	-11003	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGAGGACTTTGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	110287035	110285650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110285713_110286169_110286326_110286717_110286795_110286969
ENSMUSG00000037993.9_110286194_110287244_1	chr8	-	373	4	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	2173	11546	2173	-11546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGCAGCGCAGGCAAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	110287244	110286193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110286326_110286717_110286795_110286969_110287089_110287199
ENSMUSG00000037993.9_110286252_110287288_1	chr8	-	359	4	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	2129	11604	2129	-11604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTACGTGAGGCGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	110287288	110286251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110286326_110286717_110286795_110286969_110287089_110287199
ENSMUSG00000037993.9_110286298_110287347_1	chr8	-	372	4	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	2070	11650	2070	-11650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGGCTACGATGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	110287347	110286297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110286326_110286717_110286795_110286969_110287089_110287199
ENSMUSG00000037993.9_110287027_110288623_1	chr8	-	361	4	ISM	ENSMUSG00000037993.9	ENSMUST00000042601.9	4463	27	3870	12384	794	-12379	internal_fragment	TRUE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGGCTGATGATAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	110288623	110287026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110287089_110287199_110287348_110287931_110288040_110288580
ENSMUSG00000037993.9_110287320_110289107_1	chr8	-	356	4	ISM	ENSMUSG00000037993.9	ENSMUST00000042601.9	4463	27	3386	12677	310	-12672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAGGACGACAGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	110289107	110287319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110287348_110287931_110288040_110288580_110288769_110289075
ENSMUSG00000037993.9_110287957_110289196_1	chr8	-	392	3	ISM	ENSMUSG00000037993.9	ENSMUST00000042601.9	4463	27	3297	13314	221	-13309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTCCTCGACATCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	110289196	110287956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110288040_110288580_110288769_110289075
ENSMUSG00000037993.9_110288669_110289356_1	chr8	-	381	2	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	61	14021	61	-14021	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGGGTCTATGCCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	110289356	110288668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_110288769_110289075
ENSMUSG00000038000.11_106424530_106425058_1	chr8	-	450	2	ISM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	2658	1479	2658	-1479	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGAGCGCTGCAGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	106425058	106424529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106424961_106425039
ENSMUSG00000038000.11_106424591_106425105_1	chr8	-	436	2	ISM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	2611	1540	2611	-1540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCACTCTCACCTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	106425105	106424590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106424961_106425039
ENSMUSG00000038000.11_106425306_106426250_1	chr8	-	427	3	ISM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	1466	2255	1466	-2255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTCAAGAAACGGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	106426250	106425305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106425596_106426026_106426124_106426210
ENSMUSG00000038000.11_106425377_106426294_1	chr8	-	400	3	ISM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	1422	2326	1422	-2326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCCTGCCCCTAGATCA	NA	NA	NA	NA	NA	NA	NA	NA	106426294	106425376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106425596_106426026_106426124_106426210
ENSMUSG00000038000.11_106425534_106426940_1	chr8	-	418	6	ISM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	776	2483	776	-2483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTTGGCTACATCGGA	NA	NA	NA	NA	NA	NA	NA	NA	106426940	106425533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913
ENSMUSG00000038000.11_106426058_106427129_1	chr8	-	426	6	ISM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	587	3007	587	-3007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTACAGGCTCCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	106427129	106426057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106426991_106427078
ENSMUSG00000038000.11_106426221_106427374_1	chr8	-	433	6	ISM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	342	3170	342	-3170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCTTGGTCAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	106427374	106426220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106426363_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334
ENSMUSG00000038000.11_106426280_106427418_1	chr8	-	418	6	ISM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	298	3229	298	-3229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGCTGAAAGGTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	106427418	106426279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106426363_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334
ENSMUSG00000038000.11_106426330_106427471_1	chr8	-	421	6	ISM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	245	3279	245	-3279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGACCAGGATCATCGG	NA	NA	NA	NA	NA	NA	NA	NA	106427471	106426329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106426363_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334
ENSMUSG00000038005.16_61343523_61358634_1	chr8	+	789	7	ISM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	38	1980	38	-1975	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGAAAGCATTCGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	61343522	61358634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581
ENSMUSG00000038005.16_61346732_61358754_1	chr8	+	864	6	ISM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	3247	1860	3247	-1855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAAAGCTCCTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	61346731	61358754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581
ENSMUSG00000038005.16_61346853_61360426_1	chr8	+	799	7	ISM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	3368	188	3368	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCTGTTTGCAAAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	61346852	61360426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
ENSMUSG00000038005.16_61349769_61360614_1	chr8	+	758	5	ISM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	6284	0	6284	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTAGTGTTTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	61349768	61360614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
ENSMUSG00000038010.10_58333770_58364222_1	chr10	+	958	8	ISM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	-22	47813	0	-47813	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTGCCTGCTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	58333769	58364222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58333885_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144
ENSMUSG00000038010.10_58343420_58374107_1	chr10	+	856	8	ISM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	9628	37928	9628	-37928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATGGATTGGATATCA	NA	NA	NA	NA	NA	NA	NA	NA	58343419	58374107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364842_58374074
ENSMUSG00000038010.10_58345326_58374232_1	chr10	+	938	7	ISM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	11534	37803	11534	-37803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTTTTCAGATTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	58345325	58374232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364842_58374074
ENSMUSG00000038010.10_58348900_58376736_1	chr10	+	927	7	ISM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	15108	35299	15108	-35299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGAGTCATTGGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	58348899	58376736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364842_58374074_58374233_58376619
ENSMUSG00000038010.10_58349028_58380797_1	chr10	+	858	8	ISM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	15236	31238	15236	-31238	internal_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAGGAACTCAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	58349027	58380797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364842_58374074_58374233_58376619_58376737_58380738
ENSMUSG00000038010.10_58359958_58380931_1	chr10	+	942	7	ISM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	26166	31104	26166	-31104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCATGATCGTTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	58359957	58380931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58360119_58363163_58363284_58364144_58364223_58364726_58364842_58374074_58374233_58376619_58376737_58380738
ENSMUSG00000038010.10_58360104_58397795_1	chr10	+	869	8	ISM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	26312	14240	26312	-14240	internal_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTACCAAGCCATTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	58360103	58397795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58360119_58363163_58363284_58364144_58364223_58364726_58364842_58374074_58374233_58376619_58376737_58380738_58380932_58397722
ENSMUSG00000038010.10_58363162_58397899_1	chr10	+	960	7	ISM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	29370	14136	29370	-14136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTTTATCTTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	58363161	58397899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58363284_58364144_58364223_58364726_58364842_58374074_58374233_58376619_58376737_58380738_58380932_58397722
ENSMUSG00000038010.10_58364181_58411578_1	chr10	+	870	7	ISM	ENSMUSG00000038010.10	ENST00000412964.6	2221	14	30389	457	30389	-457	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGAGCACGCCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	58364180	58411578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58364223_58364726_58364842_58374074_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58411510
ENSMUSG00000038010.10_58364821_58411692_1	chr10	+	848	6	ISM	ENSMUSG00000038010.10	ENST00000412964.6	2221	14	31029	343	31029	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	58364820	58411692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58364842_58374074_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58411510
ENSMUSG00000038010.10_58374172_58411807_1	chr10	+	845	5	ISM	ENSMUSG00000038010.10	ENST00000412964.6	2221	14	40380	228	40380	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATATCTAGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	58374171	58411807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58411510
ENSMUSG00000038010.10_58376688_58409472_1	chr10	+	481	4	ISM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	42896	2563	42896	-2563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGCGAACGCCGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	58376687	58409472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58376737_58380738_58380932_58397722_58397900_58409410
ENSMUSG00000038010.10_58380738_58412066_1	chr10	+	927	3	ISM	ENSMUSG00000038010.10	ENST00000412964.6	2221	14	46946	-31	46946	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGAGTCCCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	58380737	58412066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58380932_58397722_58397900_58411510
ENSMUSG00000038010.10_58380785_58411525_1	chr10	+	478	4	ISM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	46993	510	46993	-510	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAAGTTTTTACCATTC	NA	NA	NA	NA	NA	NA	NA	NA	58380784	58411525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58380932_58397722_58397900_58409410_58409550_58411510
ENSMUSG00000038010.10_58380844_58411582_1	chr10	+	476	4	ISM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	47052	453	47052	-453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCACGCCTTTCTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	58380843	58411582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58380932_58397722_58397900_58409410_58409550_58411510
ENSMUSG00000038010.10_58380876_58411660_1	chr10	+	522	4	ISM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	47084	375	47084	-375	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTACAAGCCATTAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	58380875	58411660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58380932_58397722_58397900_58409410_58409550_58411510
ENSMUSG00000038010.10_58397828_58411776_1	chr10	+	477	3	ISM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	64036	259	64036	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTAAAATTATTAACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	58397827	58411776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58397900_58409410_58409550_58411510
ENSMUSG00000038010.10_58397877_58411835_1	chr10	+	487	3	ISM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	64085	200	64085	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTAAATGAGACCCGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	58397876	58411835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_58397900_58409410_58409550_58411510
ENSMUSG00000038013.15_98754943_98783212_1	chr11	+	841	5	ISM	ENSMUSG00000038013.15	ENST00000583130.5	1538	8	8	7302	8	-7302	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACAGAGGCTGCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	98754942	98783212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98755079_98775799_98775931_98781525_98781659_98782321_98782439_98782888
ENSMUSG00000038013.15_98754943_98783275_1	chr11	+	904	5	ISM	ENSMUSG00000038013.15	ENST00000583130.5	1538	8	8	7239	8	-7239	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCCTGTGAACATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	98754942	98783275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98755079_98775799_98775931_98781525_98781659_98782321_98782439_98782888
ENSMUSG00000038013.15_98754943_98783317_1	chr11	+	946	5	ISM	ENSMUSG00000038013.15	ENST00000583130.5	1538	8	8	7197	8	-7197	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCCTCCCCCACCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	98754942	98783317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98755079_98775799_98775931_98781525_98781659_98782321_98782439_98782888
ENSMUSG00000038013.15_98775800_98787049_1	chr11	+	371	3	ISM	ENSMUSG00000038013.15	ENST00000394103.7	1169	5	3	4011	3	-3465	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTCCACCCTCCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	98775799	98787049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98775931_98781525_98781659_98786942
ENSMUSG00000038013.15_98775879_98783457_1	chr11	+	871	4	ISM	ENSMUSG00000038013.15	ENST00000583130.5	1538	8	20944	7057	82	-7057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTCCTCCACCCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	98775878	98783457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98775931_98781525_98781659_98782321_98782439_98782888
ENSMUSG00000038013.15_98781596_98789618_1	chr11	+	335	3	ISM	ENSMUSG00000038013.15	ENST00000394103.7	1169	5	5799	1442	5799	-896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATCTTCAAAGAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	98781595	98789618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98781659_98786942_98787153_98789556
ENSMUSG00000038013.15_98781608_98786970_1	chr11	+	853	4	ISM	ENSMUSG00000038013.15	ENST00000583130.5	1538	8	26673	3544	5811	-3544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTGCCAGGGATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	98781607	98786970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98781659_98782321_98782439_98782888_98783546_98786942
ENSMUSG00000038013.15_98782972_98790490_1	chr11	+	906	4	ISM	ENSMUSG00000038013.15	ENST00000583130.5	1538	8	28037	24	7175	-24	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1075	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCACCCATTCTCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	98782971	98790490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98783546_98786942_98787153_98789556_98789659_98790470
ENSMUSG00000038013.15_98783056_98790514_1	chr11	+	846	4	ISM	ENSMUSG00000038013.15	ENST00000583130.5	1538	8	28121	0	7259	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	859	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCGTAGTCCTGCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	98783055	98790514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98783546_98786942_98787153_98789556_98789659_98790470
ENSMUSG00000038013.15_98789556_98790672_1	chr11	+	305	2	ISM	ENSMUSG00000038013.15	ENST00000394103.7	1169	5	13759	388	13759	158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTCGGTGATTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	98789555	98790672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98789659_98790470
ENSMUSG00000038013.15_98789590_98790741_1	chr11	+	340	2	ISM	ENSMUSG00000038013.15	ENST00000394103.7	1169	5	13793	319	13793	227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGCTAGCCAGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	98789589	98790741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98789659_98790470
ENSMUSG00000038013.15_98789636_98790796_1	chr11	+	349	2	ISM	ENSMUSG00000038013.15	ENST00000394103.7	1169	5	13839	264	13839	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGCCTTGTTGTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	98789635	98790796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98789659_98790470
ENSMUSG00000038014.8_49032695_49066393_1	chr13	-	3249	10	ISM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	55100	0	55100	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGGTGTGGCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	49066393	49032694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332
ENSMUSG00000038014.8_49032695_49066471_1	chr13	-	3327	10	ISM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	55022	0	55022	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGGTGTGGCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	49066471	49032694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332
ENSMUSG00000038014.8_49032695_49066525_1	chr13	-	3381	10	ISM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	54968	0	54968	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGGTGTGGCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	49066525	49032694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332
ENSMUSG00000038014.8_49033062_49075338_1	chr13	-	3318	12	ISM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	46155	367	46155	-367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTGTTCTTGAGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	49075338	49033061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157
ENSMUSG00000038014.8_49033378_49085850_1	chr13	-	3281	14	ISM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	35643	683	35643	-683	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAATGCTAATAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	49085850	49033377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772
ENSMUSG00000038014.8_49033837_49102744_1	chr13	-	3265	17	ISM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	18749	1142	18749	-1142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGTTTTGAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	49102744	49033836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532
ENSMUSG00000038014.8_49034109_49121094_1	chr13	-	3292	18	FSM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	399	1414	399	-1414	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	49121094	49034108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ENSMUSG00000038014.8_49034261_49121271_1	chr13	-	3317	18	FSM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	222	1566	222	-1566	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGGGTGAAGGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	49121271	49034260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ENSMUSG00000038023.13_124767234_124789901_1	chr5	+	1331	11	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	117	11618	117	-11618	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGCTCGCCCACCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	124767233	124789901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764
ENSMUSG00000038023.13_124779422_124793451_1	chr5	+	1272	10	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	12305	8068	12305	-8068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGATCATTTACAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	124779421	124793451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368
ENSMUSG00000038023.13_124783892_124795048_1	chr5	+	1296	9	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	16775	6471	16775	-6471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTTTGGCATGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	124783891	124795048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949
ENSMUSG00000038023.13_124789340_124796992_1	chr5	+	1266	10	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	22223	4527	22223	-4527	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCATGGCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	124789339	124796992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914
ENSMUSG00000038023.13_124789815_124798880_1	chr5	+	1345	10	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	22698	2639	22698	-2639	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCCGCTCTGATCAACG	NA	NA	NA	NA	NA	NA	NA	NA	124789814	124798880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ENSMUSG00000038023.13_124790278_124799028_1	chr5	+	1273	9	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	23161	2491	23161	-2491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATTTTGTAAAACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	124790277	124799028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ENSMUSG00000038023.13_124793425_124799346_1	chr5	+	1270	6	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	26308	2173	26308	-2173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTGAGTTCTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	124793424	124799346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ENSMUSG00000038023.13_124793487_124799409_1	chr5	+	1271	6	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	26370	2110	26370	-2110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTTTTAATAATCGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	124793486	124799409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ENSMUSG00000038023.13_124795010_124799550_1	chr5	+	1259	5	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	27893	1969	27893	-1969	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTTAAAACCCAGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	124795009	124799550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ENSMUSG00000038023.13_124796958_124799893_1	chr5	+	1261	2	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	29841	1626	29841	-1626	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTCAGAAAGCAATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	124796957	124799893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124797087_124798761
ENSMUSG00000038023.13_124797011_124799970_1	chr5	+	1285	2	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	29894	1549	29894	-1549	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGACTGGTATTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	124797010	124799970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124797087_124798761
ENSMUSG00000038025.9_48955410_48958822_1	chr13	-	2258	3	ISM	ENSMUSG00000038025.9	ENST00000610682.1	2868	8	65438	181	65438	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCTTTCTCTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	48958822	48955409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_48957164_48957810_48958199_48958706
ENSMUSG00000038025.9_48955557_48959355_1	chr13	-	2160	4	ISM	ENSMUSG00000038025.9	ENST00000610682.1	2868	8	64905	328	64905	-328	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGGGCCCGGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	48959355	48955556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_48957164_48957810_48958199_48958706_48958817_48959300
ENSMUSG00000038025.9_48955828_49024168_1	chr13	-	2177	8	FSM	ENSMUSG00000038025.9	ENST00000610682.1	2868	8	92	599	92	-599	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCCCGAAAGCCGCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	49024168	48955827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_48957164_48957810_48958199_48958706_48958817_48959300_48959397_48961080_48961180_48985557_48985595_48988685_48988772_49024143
ENSMUSG00000038025.9_48955894_49024225_1	chr13	-	2168	8	FSM	ENSMUSG00000038025.9	ENST00000610682.1	2868	8	35	665	35	-665	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGGCGCCTGCGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	49024225	48955893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_48957164_48957810_48958199_48958706_48958817_48959300_48959397_48961080_48961180_48985557_48985595_48988685_48988772_49024143
ENSMUSG00000038034.16_172139934_172146272_1	chr1	+	1627	5	ISM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	0	1136	0	-1136	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCACTGGCCCTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	172139933	172146272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120
ENSMUSG00000038034.16_172139934_172146334_1	chr1	+	1689	5	ISM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	0	1074	0	-1074	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCGGCCTGGAGGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	172139933	172146334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120
ENSMUSG00000038034.16_172140096_172146394_1	chr1	+	1587	5	ISM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	162	1014	162	-1014	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTGCACGGCTTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	172140095	172146394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120
ENSMUSG00000038034.16_172143717_172146534_1	chr1	+	1663	4	ISM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	3783	874	3783	-874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGACAGCCACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	172143716	172146534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172144096_172144921_172145384_172145603_172146012_172146120
ENSMUSG00000038034.16_172143831_172146886_1	chr1	+	1576	5	ISM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	3897	522	3897	-522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGGTACAGGAGTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	172143830	172146886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859
ENSMUSG00000038034.16_172143947_172147178_1	chr1	+	1592	6	ISM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	4013	230	4013	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGCCACCCCTCCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	172143946	172147178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ENSMUSG00000038034.16_172143994_172147287_1	chr1	+	1654	6	ISM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	4060	121	4060	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTTCCCTCAAGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	172143993	172147287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ENSMUSG00000038034.16_172144051_172147287_1	chr1	+	1597	6	ISM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	4117	121	4117	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTTCCCTCAAGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	172144050	172147287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ENSMUSG00000038034.16_172145067_172147408_1	chr1	+	1528	5	ISM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	5133	0	5133	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTTGTGTCTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	172145066	172147408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ENSMUSG00000038047.19_86498084_86513691_1	chr4	-	3955	9	ISM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	16601	992	10269	-992	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTCTGTGTACCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	86513691	86498083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599
ENSMUSG00000038047.19_86501548_86513715_1	chr4	-	1377	8	ISM	ENSMUSG00000038047.19	ENST00000380502.8	2626	15	12512	428	10245	-428	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACTAGTTCAGAGACTAG	NA	NA	NA	NA	NA	NA	NA	NA	86513715	86501547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599
ENSMUSG00000038047.19_86501724_86517539_1	chr4	-	1323	9	ISM	ENSMUSG00000038047.19	ENST00000380502.8	2626	15	8688	604	6421	-604	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTGATGAGTAGAAGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	86517539	86501723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495
ENSMUSG00000038047.19_86501768_86517602_1	chr4	-	1342	9	ISM	ENSMUSG00000038047.19	ENST00000380502.8	2626	15	8625	648	6358	-648	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCACATGGATGTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	86517602	86501767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495
ENSMUSG00000038047.19_86502036_86521117_1	chr4	-	1315	12	ISM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	9175	4944	2843	-916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCAGTGCTAGAGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	86521117	86502035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055
ENSMUSG00000038047.19_86503653_86522447_1	chr4	-	1289	12	ISM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	7845	6561	1513	-2533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGAATTGGAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	86522447	86503652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393
ENSMUSG00000038047.19_86504093_86523935_1	chr4	-	1289	12	ISM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	6357	7001	25	-2973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGAATTCACAAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	86523935	86504092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873
ENSMUSG00000038047.19_86517619_86522360_1	chr4	-	138	3	ISM	ENSMUSG00000038047.19	ENST00000421150.1	824	6	1600	4630	1600	-4630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGAGAGACGTTATTAG	NA	NA	NA	NA	NA	NA	NA	NA	86522360	86517618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_86517667_86518987_86519037_86522319
ENSMUSG00000038056.16_25552364_25600477_1	chr5	-	2506	15	FSM	ENSMUSG00000038056.16	ENST00000496773.1	2577	15	72	-1	72	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGTATGTGCCAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	25600477	25552363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_25552479_25554809_25554939_25556049_25556263_25557224_25557291_25558296_25558407_25559332_25559498_25559636_25559819_25564309_25564415_25564589_25564692_25568443_25568561_25571074_25571195_25577763_25578468_25590642_25590758_25592921_25593094_25600386
ENSMUSG00000038056.16_25556050_25568471_1	chr5	-	876	7	FSM	ENSMUSG00000038056.16	ENST00000436174.5	967	7	91	0	91	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGCTCATTAATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	25568471	25556049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_25556263_25557237_25557291_25558296_25558456_25559281_25559498_25564309_25564415_25564589_25564692_25568443
ENSMUSG00000038056.16_25556137_25568561_1	chr5	-	879	7	FSM	ENSMUSG00000038056.16	ENST00000436174.5	967	7	1	87	1	-87	multi-exon	FALSE	canonical	NA	NA	NA	NA	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCAGAATAGTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	25568561	25556136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_25556263_25557237_25557291_25558296_25558456_25559281_25559498_25564309_25564415_25564589_25564692_25568443
ENSMUSG00000038056.16_25556197_25558361_1	chr5	-	197	3	ISM	ENSMUSG00000038056.16	ENST00000625196.1	1010	8	12831	147	10201	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCACAGTCACAGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	25558361	25556196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25556263_25557224_25557291_25558296
ENSMUSG00000038056.16_25558324_25559451_1	chr5	-	202	2	ISM	ENSMUSG00000038056.16	ENST00000625196.1	1010	8	11741	2274	9111	-2274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGACCCTATATGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	25559451	25558323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25558407_25559332
ENSMUSG00000038056.16_25559390_25559719_1	chr5	-	191	2	ISM	ENSMUSG00000038056.16	ENST00000625196.1	1010	8	11473	3340	8843	-3340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGTCGGAACTACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	25559719	25559389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25559498_25559636
ENSMUSG00000038056.16_25559689_25568472_1	chr5	-	198	3	ISM	ENSMUSG00000038056.16	ENST00000625196.1	1010	8	2720	3639	90	-3639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGACCCTCCATTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	25568472	25559688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25559819_25564309_25564349_25568443
ENSMUSG00000038056.16_25559747_25568517_1	chr5	-	185	3	ISM	ENSMUSG00000038056.16	ENST00000625196.1	1010	8	2675	3697	45	-3697	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCCTGGAAGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	25568517	25559746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25559819_25564309_25564349_25568443
ENSMUSG00000038056.16_25559805_25568562_1	chr5	-	172	3	ISM	ENSMUSG00000038056.16	ENST00000625196.1	1010	8	2630	3755	0	-3755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGCAAAGGTTGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	25568562	25559804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25559819_25564309_25564349_25568443
ENSMUSG00000038056.16_25577341_25592975_1	chr5	-	1810	7	ISM	ENSMUSG00000038056.16	ENST00000683616.1	3041	15	110796	42	7574	-42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTAAAATTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	25592975	25577340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921
ENSMUSG00000038056.16_25577380_25593038_1	chr5	-	1834	7	ISM	ENSMUSG00000038056.16	ENST00000683616.1	3041	15	110733	81	7511	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTCATTTTGATGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	25593038	25577379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921
ENSMUSG00000038056.16_25577519_25600468_1	chr5	-	1832	8	ISM	ENSMUSG00000038056.16	ENST00000683616.1	3041	15	103303	220	81	-220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCAAAGTAATCTTAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	25600468	25577518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386
ENSMUSG00000038056.16_25577580_25600512_1	chr5	-	1815	8	ISM	ENSMUSG00000038056.16	ENST00000683616.1	3041	15	103259	281	37	-281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAATATGATCTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	25600512	25577579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386
ENSMUSG00000038056.16_25577688_25609352_1	chr5	-	1820	9	ISM	ENSMUSG00000038056.16	ENST00000683616.1	3041	15	94419	389	-8803	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTTTCATCCATAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	25609352	25577687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386_25600550_25609276
ENSMUSG00000038056.16_25577834_25614185_1	chr5	-	1911	11	ISM	ENSMUSG00000038056.16	ENST00000683616.1	3041	15	89586	535	-13636	-535	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGGCATGGGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	25614185	25577833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386_25600550_25609276_25609387_25610368_25610518_25614131
ENSMUSG00000038056.16_25577986_25614230_1	chr5	-	1804	11	ISM	ENSMUSG00000038056.16	ENST00000683616.1	3041	15	89541	687	-13681	-687	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCAGCAACTGACCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	25614230	25577985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386_25600550_25609276_25609387_25610368_25610518_25614131
ENSMUSG00000038056.16_25578203_25648860_1	chr5	-	1868	13	ISM	ENSMUSG00000038056.16	ENSMUST00000045291.14	14967	59	54883	99596	-48311	-904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTACTGTCCCCACACA	NA	NA	NA	NA	NA	NA	NA	NA	25648860	25578202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386_25600550_25609276_25609387_25610368_25610518_25614131_25614330_25619882_25620022_25648817
ENSMUSG00000038056.16_25578344_25703420_1	chr5	-	1806	14	ISM	ENSMUSG00000038056.16	ENSMUST00000045291.14	14967	59	323	99737	128	-1045	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGGAAGTGACAGAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	25703420	25578343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386_25600550_25609276_25609387_25610368_25610518_25614131_25614330_25619882_25620022_25648817_25648907_25703387
ENSMUSG00000038056.16_25578392_25703482_1	chr5	-	1820	14	ISM	ENSMUSG00000038056.16	ENSMUST00000045291.14	14967	59	261	99785	66	-1093	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCTAAAGGGCGACATG	NA	NA	NA	NA	NA	NA	NA	NA	25703482	25578391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386_25600550_25609276_25609387_25610368_25610518_25614131_25614330_25619882_25620022_25648817_25648907_25703387
ENSMUSG00000038056.16_25578449_25703526_1	chr5	-	1807	14	ISM	ENSMUSG00000038056.16	ENSMUST00000045291.14	14967	59	217	99842	22	-1150	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCCTGATTTGGCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	25703526	25578448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386_25600550_25609276_25609387_25610368_25610518_25614131_25614330_25619882_25620022_25648817_25648907_25703387
ENSMUSG00000038059.8_60608193_60634776_1	chr18	-	777	2	FSM	ENSMUSG00000038059.8	ENSMUST00000042710.8	1990	2	283	930	283	-930	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACAGACCTTGTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	60634776	60608192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_60608658_60634464
ENSMUSG00000038059.8_60608270_60634843_1	chr18	-	767	2	FSM	ENSMUSG00000038059.8	ENSMUST00000042710.8	1990	2	216	1007	216	-1007	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCTGCCTTCCTACCTC	NA	NA	NA	NA	NA	NA	NA	NA	60634843	60608269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_60608658_60634464
ENSMUSG00000038059.8_60608344_60634898_1	chr18	-	748	2	FSM	ENSMUSG00000038059.8	ENSMUST00000042710.8	1990	2	161	1081	161	-1081	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTACAGTGTAGATGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	60634898	60608343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_60608658_60634464
ENSMUSG00000038065.14_54658787_54676223_1	chr6	+	389	2	FSM	ENSMUSG00000038065.14	ENST00000409688.1	735	2	53	293	48	-293	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACCCTTTAAATGACCA	NA	NA	NA	NA	NA	NA	NA	NA	54658786	54676223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_54658917_54675964
ENSMUSG00000038069.7_48165101_48166755_1	chr8	-	561	3	FSM	ENSMUSG00000038069.7	ENSMUST00000212175.2	3393	3	211	2621	211	-2621	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGCAGCCAGAGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	48166755	48165100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_48165330_48165922_48166054_48166554
ENSMUSG00000038072.15_25427985_25455147_1	chr5	+	565	4	ISM	ENSMUSG00000038072.15	ENSMUST00000045737.14	2552	12	105	15769	105	-15768	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCCTTTTCTGCCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	25427984	25455147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_25428030_25452451_25452785_25453833_25453958_25455084
ENSMUSG00000038072.15_25453880_25460078_1	chr5	+	545	4	ISM	ENSMUSG00000038072.15	ENSMUST00000114950.2	2493	11	1519	10838	1519	-10837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGCTGCACTTCAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	25453879	25460078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_25453958_25455084_25455252_25457021_25457148_25459904
ENSMUSG00000038072.15_25453941_25460142_1	chr5	+	548	4	ISM	ENSMUSG00000038072.15	ENSMUST00000114950.2	2493	11	1580	10774	1580	-10773	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCCCAATAAGGTAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	25453940	25460142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_25453958_25455084_25455252_25457021_25457148_25459904
ENSMUSG00000038072.15_25455139_25462447_1	chr5	+	546	4	ISM	ENSMUSG00000038072.15	ENSMUST00000114950.2	2493	11	2778	8469	2778	-8468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACAGTATGACAGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	25455138	25462447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_25455252_25457021_25457148_25459904_25460155_25462390
ENSMUSG00000038072.15_25455192_25462508_1	chr5	+	554	4	ISM	ENSMUSG00000038072.15	ENSMUST00000114950.2	2493	11	2831	8408	2831	-8407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTTGATTTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	25455191	25462508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_25455252_25457021_25457148_25459904_25460155_25462390
ENSMUSG00000038072.15_25457055_25463899_1	chr5	+	551	4	ISM	ENSMUSG00000038072.15	ENSMUST00000114950.2	2493	11	4694	7017	4694	-7016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAGGACACCATGACACA	NA	NA	NA	NA	NA	NA	NA	NA	25457054	25463899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_25457148_25459904_25460155_25462390_25462509_25463809
ENSMUSG00000038072.15_25459989_25467048_1	chr5	+	553	4	ISM	ENSMUSG00000038072.15	ENSMUST00000114950.2	2493	11	7628	3868	7628	-3867	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTACCCTGAGATGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	25459988	25467048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_25460155_25462390_25462509_25463809_25463963_25466932
ENSMUSG00000038072.15_25460055_25467099_1	chr5	+	538	4	ISM	ENSMUSG00000038072.15	ENSMUST00000114950.2	2493	11	7694	3817	7694	-3816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTCTCATCAACAGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	25460054	25467099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_25460155_25462390_25462509_25463809_25463963_25466932
ENSMUSG00000038072.15_25462429_25468446_1	chr5	+	521	4	ISM	ENSMUSG00000038072.15	ENSMUST00000114950.2	2493	11	10068	2470	10068	-2469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTAAGACCTGTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	25462428	25468446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_25462509_25463809_25463963_25466932_25467152_25468377
ENSMUSG00000038072.15_25463846_25470068_1	chr5	+	550	4	ISM	ENSMUSG00000038072.15	ENSMUST00000114950.2	2493	11	11485	848	11485	-847	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGGATCCCAGCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	25463845	25470068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_25463963_25466932_25467152_25468377_25468483_25469959
ENSMUSG00000038072.15_25467027_25470435_1	chr5	+	556	4	ISM	ENSMUSG00000038072.15	ENSMUST00000114950.2	2493	11	14666	481	14666	-480	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGGTGCTTTAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	25467026	25470435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_25467152_25468377_25468483_25469959_25470098_25470247
ENSMUSG00000038072.15_25467088_25470496_1	chr5	+	556	4	ISM	ENSMUSG00000038072.15	ENSMUST00000114950.2	2493	11	14727	420	14727	-419	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGAGCGCCACTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	25467087	25470496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_25467152_25468377_25468483_25469959_25470098_25470247
ENSMUSG00000038074.17_54556338_54566409_1	chr6	-	614	3	ISM	ENSMUSG00000038074.17	ENSMUST00000046520.13	2694	4	3753	1749	3753	-791	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGTTGTCTTTGAGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	54566409	54556337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_54556672_54562787_54562916_54566257
ENSMUSG00000038074.17_54556595_54570133_1	chr6	-	659	4	FSM	ENSMUSG00000038074.17	ENSMUST00000046520.13	2694	4	29	2006	29	-1048	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATTTTTGATAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	54570133	54556594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_54556672_54562787_54562916_54566257_54566410_54569831
ENSMUSG00000038079.15_59139756_59145793_1	chr1	-	815	3	ISM	ENSMUSG00000038079.15	ENSMUST00000087475.11	1823	13	13172	0	13172	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACAAGCTTTATTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	59145793	59139755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59140358_59144704_59144827_59145702
ENSMUSG00000038079.15_59139885_59146675_1	chr1	-	749	4	ISM	ENSMUSG00000038079.15	ENSMUST00000087475.11	1823	13	12290	129	12290	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTATTGAACATACTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	59146675	59139884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612
ENSMUSG00000038079.15_59140070_59147886_1	chr1	-	820	6	ISM	ENSMUSG00000038079.15	ENSMUST00000087475.11	1823	13	11079	314	11079	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAAAGCAGGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	59147886	59140069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833
ENSMUSG00000038079.15_59140288_59148275_1	chr1	-	751	7	ISM	ENSMUSG00000038079.15	ENSMUST00000087475.11	1823	13	10690	532	10690	-218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCAGTGGCGCCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	59148275	59140287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197
ENSMUSG00000038079.15_59140335_59148331_1	chr1	-	760	7	ISM	ENSMUSG00000038079.15	ENSMUST00000087475.11	1823	13	10634	579	10634	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGCACCCTGAGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	59148331	59140334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197
ENSMUSG00000038079.15_59144781_59149196_1	chr1	-	735	7	ISM	ENSMUSG00000038079.15	ENSMUST00000087475.11	1823	13	9769	5025	9769	-4711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTGGTGGCTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	59149196	59144780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146
ENSMUSG00000038079.15_59145769_59153288_1	chr1	-	740	7	ISM	ENSMUSG00000038079.15	ENSMUST00000087475.11	1823	13	5677	6013	5677	-5699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAGTCAGCAAATGACAA	NA	NA	NA	NA	NA	NA	NA	NA	59153288	59145768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239
ENSMUSG00000038079.15_59147196_59155117_1	chr1	-	817	6	ISM	ENSMUSG00000038079.15	ENSMUST00000087475.11	1823	13	3848	7440	3848	-7126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTGTTGTGAATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	59155117	59147195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031
ENSMUSG00000038079.15_59147354_59158965_1	chr1	-	775	8	NNC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	0	-7284	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGCTGTGTGGAATACT	NA	NA	NA	NA	NA	NA	NA	NA	59158965	59147353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157124_59157166_59158861
ENSMUSG00000038084.17_29404864_29471201_1	chr16	+	3510	29	FSM	ENSMUSG00000038084.17	ENST00000392437.6	3906	29	29	367	29	-367	multi-exon	TRUE	canonical	NA	NA	NA	NA	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGCAGTCCATCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	29404863	29471201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467823_29470571
ENSMUSG00000038084.17_29404922_29430286_1	chr16	+	986	10	ISM	ENSMUSG00000038084.17	ENST00000646793.1	3837	27	87	41375	87	-40408	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTACATACGCAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	29404921	29430286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_29405155_29405787_29405885_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214
ENSMUSG00000038084.17_29404922_29471201_1	chr16	+	3452	29	FSM	ENSMUSG00000038084.17	ENST00000392437.6	3906	29	87	367	87	-367	multi-exon	FALSE	canonical	NA	NA	NA	NA	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGCAGTCCATCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	29404921	29471201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467823_29470571
ENSMUSG00000038084.17_29404922_29471270_1	chr16	+	3521	29	FSM	ENSMUSG00000038084.17	ENST00000392437.6	3906	29	87	298	87	-298	multi-exon	FALSE	canonical	NA	NA	NA	NA	1872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCAGTCAGGCTTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	29404921	29471270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467823_29470571
ENSMUSG00000038084.17_29404976_29471270_1	chr16	+	3467	29	FSM	ENSMUSG00000038084.17	ENST00000392437.6	3906	29	141	298	141	-298	multi-exon	FALSE	canonical	NA	NA	NA	NA	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCAGTCAGGCTTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	29404975	29471270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467823_29470571
ENSMUSG00000038084.17_29404976_29471356_1	chr16	+	3553	29	FSM	ENSMUSG00000038084.17	ENST00000392437.6	3906	29	141	212	141	-212	multi-exon	FALSE	canonical	NA	NA	NA	NA	2647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTTGACGAATTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	29404975	29471356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467823_29470571
ENSMUSG00000038084.17_29405056_29471356_1	chr16	+	3473	29	FSM	ENSMUSG00000038084.17	ENST00000392437.6	3906	29	221	212	221	-212	multi-exon	FALSE	canonical	NA	NA	NA	NA	2196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTTGACGAATTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	29405055	29471356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467823_29470571
ENSMUSG00000038084.17_29405067_29430790_1	chr16	+	1007	12	ISM	ENSMUSG00000038084.17	ENST00000646793.1	3837	27	232	40871	232	-39904	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAACCATATTTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	29405066	29430790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_29405155_29405787_29405885_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724
ENSMUSG00000038084.17_29405132_29430838_1	chr16	+	990	12	ISM	ENSMUSG00000038084.17	ENST00000646793.1	3837	27	297	40823	297	-39856	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCAGTCCAAGCAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	29405131	29430838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_29405155_29405787_29405885_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724
ENSMUSG00000038084.17_29405832_29432855_1	chr16	+	1014	12	ISM	ENSMUSG00000038084.17	ENST00000646793.1	3837	27	997	38806	997	-37839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCAAAGGTGGATTATTA	NA	NA	NA	NA	NA	NA	NA	NA	29405831	29432855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_29405885_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781
ENSMUSG00000038084.17_29405832_29471569_1	chr16	+	3543	28	ISM	ENSMUSG00000038084.17	ENST00000392437.6	3906	29	997	-1	997	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGTTGGTTAAAAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	29405831	29471569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467823_29470571
ENSMUSG00000038102.16_47943487_47965471_1	chr8	-	2163	14	ISM	ENSMUSG00000038102.16	ENSMUST00000039061.15	4332	30	21031	337	-1088	-337	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTATTTACCTTTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	47965471	47943486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370
ENSMUSG00000038115.17_125767215_125783594_1	chr6	+	284	4	ISM	ENSMUSG00000038115.17	ENST00000682330.1	3232	24	79688	233148	79688	-233148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTACCCGCTTCATGAT	NA	NA	NA	NA	NA	NA	NA	NA	125767214	125783594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125767356_125770519_125770575_125773208_125773261_125783558
ENSMUSG00000038115.17_125957111_125969840_1	chr6	+	277	4	ISM	ENSMUSG00000038115.17	ENST00000682330.1	3232	24	269584	46902	269584	-46902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACCACTCAAAACGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	125957110	125969840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125957170_125959678_125959737_125959885_125959987_125969781
ENSMUSG00000038115.17_125990174_125992576_1	chr6	+	255	3	ISM	ENSMUSG00000038115.17	ENST00000682330.1	3232	24	302647	24166	302647	-24166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTTTCAACGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	125990173	125992576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125990276_125990642_125990696_125992476
ENSMUSG00000038115.17_126013839_126016401_1	chr6	+	275	2	ISM	ENSMUSG00000038115.17	ENST00000682330.1	3232	24	326312	341	326312	-341	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGCTCTGCACCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	126013838	126016401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_126013917_126016204
ENSMUSG00000038116.17_156038654_156118550_1	chr2	+	1349	9	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	92	33322	92	-33322	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTGCTGAGGTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	156038653	156118550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408
ENSMUSG00000038116.17_156065280_156129814_1	chr2	+	1392	9	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	26718	22058	26718	-22058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAATTTTTCCGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	156065279	156129814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720
ENSMUSG00000038116.17_156096179_156134478_1	chr2	+	1375	8	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	57617	17394	57617	-17394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGGTATTTTCCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	156096178	156134478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385
ENSMUSG00000038116.17_156109200_156136135_1	chr2	+	1408	8	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	70638	15737	70638	-15737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGAGGTGGTCCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	156109199	156136135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016
ENSMUSG00000038116.17_156109334_156138628_1	chr2	+	1394	9	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	70772	13244	70772	-13244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGAAATACACCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	156109333	156138628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568
ENSMUSG00000038116.17_156114488_156140542_1	chr2	+	1381	9	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	75926	11330	75926	-11330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAAGATCGTGGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	156114487	156140542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440
ENSMUSG00000038116.17_156115672_156144760_1	chr2	+	1376	9	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	77110	7112	77110	-7112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAAGAGCACATCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	156115671	156144760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702
ENSMUSG00000038116.17_156115733_156144840_1	chr2	+	1395	9	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	77171	7032	77171	-7032	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGTGGAGAAGCCATCGC	NA	NA	NA	NA	NA	NA	NA	NA	156115732	156144840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702
ENSMUSG00000038116.17_156129810_156146628_1	chr2	+	1404	8	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	91248	5244	91248	-5244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGCTCTCAGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	156129809	156146628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550
ENSMUSG00000038116.17_156129880_156146676_1	chr2	+	1382	8	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	91318	5196	91318	-5196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCCTGCAGGATGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	156129879	156146676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550
ENSMUSG00000038116.17_156134395_156149318_1	chr2	+	1416	8	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	95833	2554	95833	-2554	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGTGCAGCAGATCGCC	NA	NA	NA	NA	NA	NA	NA	NA	156134394	156149318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ENSMUSG00000038116.17_156136123_156149656_1	chr2	+	1393	6	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	97561	2216	97561	-2216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAATGAGAGCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	156136122	156149656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ENSMUSG00000038116.17_156140517_156149901_1	chr2	+	1389	4	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	101955	1971	101955	-1971	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTCCATTTTCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	156140516	156149901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156140637_156144702_156145100_156146550_156146735_156149213
ENSMUSG00000038116.17_156144792_156150106_1	chr2	+	1385	3	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	106230	1766	106230	-1766	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTCTACCCACTTACT	NA	NA	NA	NA	NA	NA	NA	NA	156144791	156150106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156145100_156146550_156146735_156149213
ENSMUSG00000038116.17_156144946_156150263_1	chr2	+	1388	3	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	106384	1609	106384	-1609	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGCTTGTTTCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	156144945	156150263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156145100_156146550_156146735_156149213
ENSMUSG00000038116.17_156146581_156150465_1	chr2	+	1406	2	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	108019	1407	108019	-1407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTGTTTGCTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	156146580	156150465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156146735_156149213
ENSMUSG00000038121.7_68401656_68433273_1	chr18	-	1113	4	FSM	ENSMUSG00000038121.7	ENST00000402563.5	1145	4	36	-4	36	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATAGGTTTGGGGGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	68433273	68401655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_68402024_68405633_68405746_68408832_68409337_68433144
ENSMUSG00000038121.7_68401742_68433273_1	chr18	-	1027	4	FSM	ENSMUSG00000038121.7	ENST00000402563.5	1145	4	36	82	36	-82	multi-exon	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGAACATGTTTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	68433273	68401741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_68402024_68405633_68405746_68408832_68409337_68433144
ENSMUSG00000038127.16_27255246_27267750_1	chr16	+	3044	4	ISM	ENSMUSG00000038127.16	ENSMUST00000096127.11	1096	10	47516	-2619	47516	2617	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGCCTGGGTCACTA	NA	NA	NA	NA	NA	NA	NA	NA	27255245	27267750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_27255353_27257050_27257128_27263293_27263401_27264997
ENSMUSG00000038127.16_27263323_27267931_1	chr16	+	3012	2	ISM	ENSMUSG00000038127.16	ENSMUST00000096127.11	1096	10	55593	-2800	55593	2798	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACAGCCTTGACTTATA	NA	NA	NA	NA	NA	NA	NA	NA	27263322	27267931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_27263401_27264997
ENSMUSG00000038141.12_6330920_6346036_1	chr17	+	474	6	ISM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	10175	12553	10175	-12553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCCACTTCGTGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	6330919	6346036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996
ENSMUSG00000038141.12_6340840_6348220_1	chr17	+	500	5	ISM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	20095	10369	20095	-10369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGCTGTGCGTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	6340839	6348220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126
ENSMUSG00000038141.12_6346000_6351222_1	chr17	+	515	6	ISM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	25255	7367	25255	-7367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATAGTGCGAGCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	6345999	6351222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166
ENSMUSG00000038143.17_47639315_47656300_1	chr8	-	438	2	FSM	ENSMUSG00000038143.17	ENST00000513034.3	445	2	9	-2	9	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGGTTGGGGGTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	47656300	47639314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_47639608_47656155
ENSMUSG00000038143.17_47639315_47656300_2	chr8	-	429	2	NNC	ENSMUSG00000038143.17	novel	445	2	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1069	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGGTTGGGGGTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	47656300	47639314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_47639608_47656164
ENSMUSG00000038145.18_121989441_121997260_1	chr9	+	2255	3	ISM	ENSMUSG00000038145.18	ENSMUST00000120173.9	4758	6	43072	1508	43072	-1508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACTCTGACGAGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	121989440	121997260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_121989602_121992982_121993118_121995301
ENSMUSG00000038145.18_121989501_121997378_1	chr9	+	2313	3	ISM	ENSMUSG00000038145.18	ENSMUST00000120173.9	4758	6	43132	1390	43132	-1390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAGAAACTGCTCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	121989500	121997378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_121989602_121992982_121993118_121995301
ENSMUSG00000038147.15_171700300_171712250_1	chr1	+	461	3	NNC	ENSMUSG00000038147.15	novel	483	3	NA	NA	23	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATGCTATTCATACATA	NA	NA	NA	NA	NA	NA	NA	NA	171700299	171712250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_171700516_171700872_171701022_171712154
ENSMUSG00000038147.15_171700300_171712250_2	chr1	+	456	3	NNC	ENSMUSG00000038147.15	novel	483	3	NA	NA	23	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATGCTATTCATACATA	NA	NA	NA	NA	NA	NA	NA	NA	171700299	171712250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_171700510_171700871_171701022_171712154
ENSMUSG00000038147.15_171700300_171712250_3	chr1	+	462	3	FSM	ENSMUSG00000038147.15	ENST00000311224.8	483	3	23	-2	23	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATGCTATTCATACATA	NA	NA	NA	NA	NA	NA	NA	NA	171700299	171712250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_171700516_171700871_171701022_171712154
ENSMUSG00000038147.15_171700300_171712250_4	chr1	+	457	3	FSM	ENSMUSG00000038147.15	ENST00000368048.7	478	3	23	-2	23	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATGCTATTCATACATA	NA	NA	NA	NA	NA	NA	NA	NA	171700299	171712250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_171700516_171700871_171701014_171712151
ENSMUSG00000038150.8_98473295_98474858_1	chr11	-	622	3	ISM	ENSMUSG00000038150.8	ENSMUST00000052919.8	2184	4	3336	1213	83	243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGGTGGTCAGGAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	98474858	98473294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98473674_98473961_98474114_98474767
ENSMUSG00000038150.8_98473351_98474915_1	chr11	-	623	3	ISM	ENSMUSG00000038150.8	ENSMUST00000052919.8	2184	4	3279	1269	26	187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCCATTCTGAAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	98474915	98473350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_98473674_98473961_98474114_98474767
ENSMUSG00000038150.8_98473503_98478043_1	chr11	-	612	4	FSM	ENSMUSG00000038150.8	ENSMUST00000052919.8	2184	4	151	1421	151	35	multi-exon	FALSE	canonical	NA	NA	NA	NA	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTGGAAGGCCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	98478043	98473502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_98473674_98473961_98474114_98474767_98474967_98477953
ENSMUSG00000038150.8_98473538_98474861_1	chr11	-	329	3	NNC	ENSMUSG00000038150.8	novel	414	3	NA	NA	80	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTAGCCCCTTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	98474861	98473537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_98473674_98473966_98474114_98474815
ENSMUSG00000038150.8_98473538_98474861_2	chr11	-	334	3	FSM	ENSMUSG00000038150.8	ENST00000584220.5	414	3	80	0	80	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTAGCCCCTTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	98474861	98473537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_98473674_98473961_98474114_98474815
ENSMUSG00000038150.8_98473538_98474939_1	chr11	-	410	3	NNC	ENSMUSG00000038150.8	novel	414	3	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTAGCCCCTTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	98474939	98473537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_98473674_98473961_98474114_98474817
ENSMUSG00000038151.14_44313357_44313928_1	chr10	-	477	2	ISM	ENSMUSG00000038151.14	ENST00000369089.3	4472	5	9118	191	9118	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGGTTGGTTGGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	44313928	44313356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_44313601_44313695
ENSMUSG00000038151.14_44313419_44313972_1	chr10	-	459	2	ISM	ENSMUSG00000038151.14	ENST00000369089.3	4472	5	9074	253	9074	-246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTTGCCATCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	44313972	44313418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_44313601_44313695
ENSMUSG00000038151.14_44313459_44314036_1	chr10	-	483	2	ISM	ENSMUSG00000038151.14	ENST00000369089.3	4472	5	9010	293	9010	-286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTTCTTGTGTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	44314036	44313458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_44313601_44313695
ENSMUSG00000038151.14_44315804_44316682_1	chr10	-	463	2	ISM	ENSMUSG00000038151.14	ENST00000369089.3	4472	5	6364	2638	6364	-141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGAACGGCCTCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	44316682	44315803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_44316239_44316654
ENSMUSG00000038151.14_44315858_44316744_1	chr10	-	471	2	ISM	ENSMUSG00000038151.14	ENST00000369089.3	4472	5	6302	2692	6302	-195	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGGTCAGAAAAGAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	44316744	44315857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_44316239_44316654
ENSMUSG00000038151.14_44316004_44317216_1	chr10	-	526	3	ISM	ENSMUSG00000038151.14	ENST00000369089.3	4472	5	5830	2838	5830	-341	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGCTGCTGGGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	44317216	44316003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_44316239_44316654_44316784_44317054
ENSMUSG00000038151.14_44316173_44317339_1	chr10	-	480	3	ISM	ENSMUSG00000038151.14	ENST00000369089.3	4472	5	5707	3007	5707	-510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTTACCAATGTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	44317339	44316172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_44316239_44316654_44316784_44317054
ENSMUSG00000038151.14_44316685_44317449_1	chr10	-	494	2	ISM	ENSMUSG00000038151.14	ENST00000369089.3	4472	5	5597	3519	5597	-1022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACAGGAGAGAAGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	44317449	44316684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_44316784_44317054
ENSMUSG00000038151.14_44316751_44317488_1	chr10	-	467	2	ISM	ENSMUSG00000038151.14	ENST00000369089.3	4472	5	5558	3585	5558	-1088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTGCCAGACCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	44317488	44316750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_44316784_44317054
ENSMUSG00000038151.14_44317764_44322855_1	chr10	-	465	2	ISM	ENSMUSG00000038151.14	ENST00000369089.3	4472	5	191	4598	191	-2101	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCCGGGAAACACGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44322855	44317763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_44318161_44322787
ENSMUSG00000038151.14_44317831_44322936_1	chr10	-	479	2	ISM	ENSMUSG00000038151.14	ENST00000369089.3	4472	5	110	4665	110	-2168	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAACTCCAAGTCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	44322936	44317830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_44318161_44322787
ENSMUSG00000038151.14_44317965_44326149_1	chr10	-	484	3	ISM	ENSMUSG00000038151.14	ENSMUST00000218369.2	2517	7	7057	2302	-3103	-2302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCCGACATGCCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	44326149	44317964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_44318161_44322787_44323041_44326114
ENSMUSG00000038151.14_44318026_44326190_1	chr10	-	464	3	ISM	ENSMUSG00000038151.14	ENSMUST00000218369.2	2517	7	7016	2363	-3144	-2363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTTCCAACATTTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	44326190	44318025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_44318161_44322787_44323041_44326114
ENSMUSG00000038151.14_44322987_44334502_1	chr10	-	460	4	ISM	ENSMUSG00000038151.14	ENSMUST00000105490.3	4025	7	181	8698	181	-7324	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAACTGGATGCGCTACGT	NA	NA	NA	NA	NA	NA	NA	NA	44334502	44322986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_44323041_44326114_44326235_44332620_44332867_44334462
ENSMUSG00000038160.8_44144354_44239715_1	chr10	+	1780	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	0	572	0	-572	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCATAGCAAGGGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	44144353	44239715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ENSMUSG00000038160.8_44144411_44239765_1	chr10	+	1773	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	57	522	57	-522	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGGATTTATTACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	44144410	44239765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ENSMUSG00000038160.8_44144411_44239841_1	chr10	+	1849	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	57	446	57	-446	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACGTTGGTCACTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	44144410	44239841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ENSMUSG00000038160.8_44162051_44239954_1	chr10	+	1769	7	ISM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	17697	333	24	-333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTTTTTTGTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	44162050	44239954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ENSMUSG00000038160.8_44162120_44370104_1	chr10	+	1812	6	NNC	ENSMUSG00000038160.8	novel	1905	6	NA	NA	93	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATCTCAGCTGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	44162119	44370104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_44162194_44170592_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44368820
ENSMUSG00000038160.8_44162120_44370104_2	chr10	+	1811	6	NNC	ENSMUSG00000038160.8	novel	1905	6	NA	NA	93	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATCTCAGCTGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	44162119	44370104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_44162194_44170591_44170671_44179564_44179726_44195455_44195551_44222952_44223071_44368820
ENSMUSG00000038160.8_44162120_44370104_3	chr10	+	1807	6	NNC	ENSMUSG00000038160.8	novel	1905	6	NA	NA	93	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATCTCAGCTGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	44162119	44370104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_44162194_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44368826
ENSMUSG00000038160.8_44162120_44370104_4	chr10	+	1809	6	NNC	ENSMUSG00000038160.8	novel	1905	6	NA	NA	93	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATCTCAGCTGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	44162119	44370104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_44162194_44170591_44170671_44179562_44179726_44195459_44195551_44222952_44223071_44368820
ENSMUSG00000038160.8_44162120_44370104_5	chr10	+	1813	6	FSM	ENSMUSG00000038160.8	ENST00000636437.1	1905	6	93	-1	93	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATCTCAGCTGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	44162119	44370104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_44162194_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44368820
ENSMUSG00000038160.8_44165891_44240130_1	chr10	+	1770	6	ISM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	21537	157	3864	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCACTCTCTCGATGG	NA	NA	NA	NA	NA	NA	NA	NA	44165890	44240130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ENSMUSG00000038160.8_44165940_44240183_1	chr10	+	1774	6	ISM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	21586	104	3913	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGCTGTCCACATTGA	NA	NA	NA	NA	NA	NA	NA	NA	44165939	44240183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ENSMUSG00000038160.8_44170592_44240292_1	chr10	+	1836	5	ISM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	26238	-5	8565	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGGCTCAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	44170591	44240292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ENSMUSG00000038167.7_125339752_125340199_1	chr6	-	274	2	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	17270	49	17270	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGGACTCTACCTCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	125340199	125339751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125339831_125340004
ENSMUSG00000038167.7_125340505_125341610_1	chr6	-	242	2	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	15859	802	15859	-802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTCACCTTCTCCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	125341610	125340504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125340683_125341546
ENSMUSG00000038167.7_125340627_125347397_1	chr6	-	262	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	10072	924	10072	-924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGCCCTCCATGCCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	125347397	125340626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125340683_125341546_125341699_125347343
ENSMUSG00000038167.7_125341626_125347617_1	chr6	-	262	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	9852	1923	9852	-1923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCACGGAGTCCCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	125347617	125341625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125341699_125347343_125347460_125347544
ENSMUSG00000038167.7_125347344_125349068_1	chr6	-	297	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	8401	7641	8401	-7641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGGTGGGTCAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	125349068	125347343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125347460_125347544_125347678_125349020
ENSMUSG00000038167.7_125347559_125349461_1	chr6	-	260	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	8008	7856	8008	-7856	internal_fragment	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCGAGACCCCAGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	125349461	125347558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125347678_125349020_125349141_125349440
ENSMUSG00000038167.7_125347621_125349505_1	chr6	-	242	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	7964	7918	7964	-7918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCGGACAGAGCCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	125349505	125347620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125347678_125349020_125349141_125349440
ENSMUSG00000038167.7_125347663_125349572_1	chr6	-	267	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	7897	7960	7897	-7960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTTCTCCGATGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	125349572	125347662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125347678_125349020_125349141_125349440
ENSMUSG00000038167.7_125349089_125349827_1	chr6	-	242	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	7642	9386	7642	-9386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGAGTATACCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	125349827	125349088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125349141_125349440_125349579_125349775
ENSMUSG00000038167.7_125349123_125349918_1	chr6	-	299	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	7551	9420	7551	-9420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGATCTGATGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	125349918	125349122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125349141_125349440_125349579_125349775
ENSMUSG00000038167.7_125349808_125351515_1	chr6	-	253	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	5954	10105	5954	-10105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCGAGCCCAAGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	125351515	125349807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125349926_125350069_125350181_125351491
ENSMUSG00000038167.7_125349862_125351564_1	chr6	-	248	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	5905	10159	5905	-10159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCGCATCACCAAATACCCA	NA	NA	NA	NA	NA	NA	NA	NA	125351564	125349861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125349926_125350069_125350181_125351491
ENSMUSG00000038167.7_125349915_125351612_1	chr6	-	243	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	5857	10212	5857	-10212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAGCGCTCCGGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	125351612	125349914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125349926_125350069_125350181_125351491
ENSMUSG00000038167.7_125351514_125352703_1	chr6	-	292	4	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	4766	11811	4766	-11811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACAAAATGGCTTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	125352703	125351513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125351642_125351936_125351988_125352205_125352302_125352686
ENSMUSG00000038167.7_125351589_125352742_1	chr6	-	256	4	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	4727	11886	4727	-11886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTTGGGAGGAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	125352742	125351588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125351642_125351936_125351988_125352205_125352302_125352686
ENSMUSG00000038167.7_125352265_125354393_1	chr6	-	251	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	3076	12562	3076	-12562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGAACTCCTGACCACT	NA	NA	NA	NA	NA	NA	NA	NA	125354393	125352264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125352302_125352686_125352852_125354344
ENSMUSG00000038167.7_125352803_125355703_1	chr6	-	244	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	1766	13100	1766	-13100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGATGCCCCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	125355703	125352802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125352852_125354344_125354501_125355664
ENSMUSG00000038167.7_125354414_125355839_1	chr6	-	262	2	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	1630	14711	1630	-14711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCAGACCCAGAGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	125355839	125354413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125354501_125355664
ENSMUSG00000038167.7_125355664_125357372_1	chr6	-	270	2	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	97	15961	97	-15961	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCGCCTGTGCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	125357372	125355663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125355874_125357312
ENSMUSG00000038167.7_125355723_125357415_1	chr6	-	254	2	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	54	16020	54	-16020	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACCTCTGCCCACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	125357415	125355722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125355874_125357312
ENSMUSG00000038167.7_125355776_125357464_1	chr6	-	250	2	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	5	16073	5	-16073	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCCTCCAAGGCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	125357464	125355775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125355874_125357312
ENSMUSG00000038170.16_97637325_97648725_1	chr3	-	763	3	ISM	ENSMUSG00000038170.16	ENST00000313431.13	5383	19	26666	925	26600	-925	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGTGCACACAGACCCTA	NA	NA	NA	NA	NA	NA	NA	NA	97648725	97637324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97637907_97638142_97638232_97648633
ENSMUSG00000038170.16_97637655_97650921_1	chr3	-	840	6	ISM	ENSMUSG00000038170.16	ENST00000313431.13	5383	19	24470	1255	24404	-1255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCAAGCCTCAGAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	97650921	97637654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97637907_97638142_97638232_97648633_97648762_97649804_97649918_97650480_97650619_97650801
ENSMUSG00000038170.16_97649841_97659215_1	chr3	-	768	7	ISM	ENSMUSG00000038170.16	ENSMUST00000045243.15	6185	17	16110	3671	16110	-3671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCCTGGTCAAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	97659215	97649840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97649918_97650480_97650619_97650801_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124
ENSMUSG00000038170.16_97659222_97664250_1	chr3	-	740	6	ISM	ENSMUSG00000038170.16	ENSMUST00000045243.15	6185	17	11075	13052	11075	-13052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTCTGAGCGATCGGA	NA	NA	NA	NA	NA	NA	NA	NA	97664250	97659221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199
ENSMUSG00000038170.16_97661442_97664967_1	chr3	-	837	6	ISM	ENSMUSG00000038170.16	ENSMUST00000045243.15	6185	17	10358	15272	10358	-15272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGCCAAACCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	97664967	97661441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847
ENSMUSG00000038170.16_97662800_97673881_1	chr3	-	764	6	ISM	ENSMUSG00000038170.16	ENSMUST00000045243.15	6185	17	1444	16630	1444	-16630	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACACCTAAGTCACAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	97673881	97662799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97673789
ENSMUSG00000038170.16_97662854_97673933_1	chr3	-	762	6	ISM	ENSMUSG00000038170.16	ENSMUST00000045243.15	6185	17	1392	16684	1392	-16684	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTGGAGGCGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	97673933	97662853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97673789
ENSMUSG00000038170.16_97664279_97674067_1	chr3	-	757	5	ISM	ENSMUSG00000038170.16	ENSMUST00000045243.15	6185	17	1258	18109	1258	-18109	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCGATGTGTGCAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	97674067	97664278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97673789
ENSMUSG00000038170.16_97664362_97674194_1	chr3	-	801	5	ISM	ENSMUSG00000038170.16	ENSMUST00000045243.15	6185	17	1131	18192	1131	-18192	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCGCTCTATTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	97674194	97664361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97673789
ENSMUSG00000038170.16_97666193_97674501_1	chr3	-	766	2	ISM	ENSMUSG00000038170.16	ENSMUST00000045243.15	6185	17	824	20023	824	-20023	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCCAGCCACCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	97674501	97666192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97666247_97673789
ENSMUSG00000038170.16_97700438_97731976_1	chr3	-	599	5	NNC	ENSMUSG00000038170.16	novel	600	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCTGCCTTTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	97731976	97700437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_97700637_97700800_97700925_97704047_97704125_97731530_97731642_97731888
ENSMUSG00000038170.16_97700438_97731976_2	chr3	-	600	5	FSM	ENSMUSG00000038170.16	ENST00000464103.5	600	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCTGCCTTTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	97731976	97700437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_97700637_97700800_97700925_97704047_97704125_97731530_97731642_97731887
ENSMUSG00000038170.16_97700438_97751022_1	chr3	-	634	5	FSM	ENSMUSG00000038170.16	ENST00000612320.1	616	5	6	-24	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCTGCCTTTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	97751022	97700437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_97700637_97700800_97700925_97731530_97731642_97748949_97749102_97750974
ENSMUSG00000038187.15_112914853_112931952_1	chr7	-	1763	6	ISM	ENSMUSG00000038187.15	ENSMUST00000117577.8	2384	8	14540	20	14540	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTCTGACCAACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	112931952	112914852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816
ENSMUSG00000038187.15_112914853_112932070_1	chr7	-	1881	6	ISM	ENSMUSG00000038187.15	ENSMUST00000117577.8	2384	8	14422	20	14422	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTCTGACCAACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	112932070	112914852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816
ENSMUSG00000038187.15_112915065_112934614_1	chr7	-	1787	7	ISM	ENSMUSG00000038187.15	ENSMUST00000117577.8	2384	8	11878	232	11878	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGCCCTATTAGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	112934614	112915064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528
ENSMUSG00000038187.15_112915187_112934704_1	chr7	-	1755	7	ISM	ENSMUSG00000038187.15	ENSMUST00000117577.8	2384	8	11788	354	11788	-337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCTCAGTACAGTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	112934704	112915186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528
ENSMUSG00000038187.15_112915298_112951145_1	chr7	-	1823	8	ISM	ENSMUSG00000038187.15	ENSMUST00000047091.14	2581	11	17401	465	-4653	-448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTAAGATGAATATTACAA	NA	NA	NA	NA	NA	NA	NA	NA	112951145	112915297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112950987
ENSMUSG00000038187.15_112915517_112968543_1	chr7	-	1894	11	FSM	ENSMUSG00000038187.15	ENSMUST00000047091.14	2581	11	3	684	3	-667	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCTTTTTTAAAGACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	112968543	112915516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112950987_112951146_112964111_112964177_112968078_112968166_112968405
ENSMUSG00000038187.15_112915616_112968543_1	chr7	-	1795	11	FSM	ENSMUSG00000038187.15	ENSMUST00000047091.14	2581	11	3	783	3	-766	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATGCTACTCTTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	112968543	112915615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112950987_112951146_112964111_112964177_112968078_112968166_112968405
ENSMUSG00000038208.14_98280746_98282563_1	chr11	-	492	4	FSM	ENSMUSG00000038208.14	ENST00000619169.4	512	4	21	-1	21	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGGGGTTTGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	98282563	98280745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_98280928_98281112_98281318_98281905_98281968_98282520
ENSMUSG00000038208.14_98280746_98291263_1	chr11	-	656	4	FSM	ENSMUSG00000038208.14	ENST00000579146.5	653	4	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGGGGTTTGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	98291263	98280745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_98280928_98288721_98288875_98289710_98289809_98291040
ENSMUSG00000038208.14_98280746_98291263_2	chr11	-	649	4	NNC	ENSMUSG00000038208.14	novel	653	4	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGGGGTTTGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	98291263	98280745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_98280917_98288717_98288875_98289710_98289809_98291040
ENSMUSG00000038208.14_98280746_98291263_3	chr11	-	654	4	NNC	ENSMUSG00000038208.14	novel	653	4	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGGGGTTTGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	98291263	98280745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_98280928_98288721_98288875_98289710_98289809_98291042
ENSMUSG00000038210.11_52219090_52222228_1	chr6	-	1721	2	FSM	ENSMUSG00000038210.11	ENSMUST00000048026.10	2287	2	562	4	562	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTGTGTTTCAATACTC	NA	NA	NA	NA	NA	NA	NA	NA	52222228	52219089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_52220573_52221990
ENSMUSG00000038210.11_52219227_52222367_1	chr6	-	1723	2	FSM	ENSMUSG00000038210.11	ENSMUST00000048026.10	2287	2	423	141	423	-141	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTGGGGATAATAAAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	52222367	52219226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_52220573_52221990
ENSMUSG00000038210.11_52219277_52222434_1	chr6	-	1740	2	FSM	ENSMUSG00000038210.11	ENSMUST00000048026.10	2287	2	356	191	356	-191	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCCCCGAAGGAACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	52222434	52219276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_52220573_52221990
ENSMUSG00000038212.17_65213651_65219902_1	chr13	-	1350	4	ISM	ENSMUSG00000038212.17	ENST00000533726.1	958	7	3612	-824	3612	-691	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCAGGAAAAGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	65219902	65213650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818
ENSMUSG00000038212.17_65213768_65221441_1	chr13	-	1334	5	ISM	ENSMUSG00000038212.17	ENSMUST00000054730.10	3251	13	39347	808	2073	707	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAACTTTGTGTCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	65221441	65213767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369
ENSMUSG00000038212.17_65214242_65229246_1	chr13	-	1341	9	ISM	ENSMUSG00000038212.17	ENSMUST00000054730.10	3251	13	31542	1282	-5732	233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	65229246	65214241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213
ENSMUSG00000038212.17_65214390_65243528_1	chr13	-	1447	11	ISM	ENSMUSG00000038212.17	ENSMUST00000054730.10	3251	13	17260	1430	17260	85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCCATAGAGGAAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	65243528	65214389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432
ENSMUSG00000038212.17_65214516_65260346_1	chr13	-	1350	12	FSM	ENSMUSG00000038212.17	ENSMUST00000155487.8	3832	12	443	2039	442	-41	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGAGGACATTGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	65260346	65214515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ENSMUSG00000038212.17_65214587_65260430_1	chr13	-	1363	12	FSM	ENSMUSG00000038212.17	ENSMUST00000155487.8	3832	12	359	2110	358	-112	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACCAGTGGAGTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	65260430	65214586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ENSMUSG00000038212.17_65215742_65260573_1	chr13	-	1352	11	ISM	ENSMUSG00000038212.17	ENSMUST00000054730.10	3251	13	215	2782	215	-1267	intron_retention	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTTCCATGTTGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	65260573	65215741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ENSMUSG00000038212.17_65215798_65260621_1	chr13	-	1344	11	ISM	ENSMUSG00000038212.17	ENSMUST00000054730.10	3251	13	167	2838	167	-1323	intron_retention	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATACGAGGGCTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	65260621	65215797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ENSMUSG00000038213.8_125199108_125207247_1	chr6	-	1083	5	ISM	ENSMUSG00000038213.8	ENST00000266556.8	1457	6	456	55	456	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCTTTGTTGAGAATACAT	NA	NA	NA	NA	NA	NA	NA	NA	125207247	125199107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125199319_125201826_125201914_125203453_125203760_125205025_125205365_125207107
ENSMUSG00000038213.8_125199173_125207287_1	chr6	-	1058	5	ISM	ENSMUSG00000038213.8	ENST00000266556.8	1457	6	416	120	416	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCCTCCCCAGCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	125207287	125199172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125199319_125201826_125201914_125203453_125203760_125205025_125205365_125207107
ENSMUSG00000038213.8_125199238_125207342_1	chr6	-	1048	5	ISM	ENSMUSG00000038213.8	ENST00000266556.8	1457	6	361	185	361	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAACAAAGAATACACA	NA	NA	NA	NA	NA	NA	NA	NA	125207342	125199237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125199319_125201826_125201914_125203453_125203760_125205025_125205365_125207107
ENSMUSG00000038213.8_125201866_125207592_1	chr6	-	1041	5	ISM	ENSMUSG00000038213.8	ENSMUST00000043422.8	2352	7	1231	970	111	-970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGCTGTTGTTGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	125207592	125201865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_125201914_125203453_125203760_125205025_125205365_125207107_125207381_125207517
ENSMUSG00000038217.14_75359037_75359722_1	chr11	+	305	3	ISM	ENSMUSG00000038217.14	ENSMUST00000043598.14	1153	5	132	1761	132	-1761	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGACCTTCTCTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	75359036	75359722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_75359204_75359382_75359466_75359667
ENSMUSG00000038225.16_47031898_47034510_1	chr8	-	346	2	ISM	ENSMUSG00000038225.16	ENST00000503752.5	1703	12	29171	-3	29171	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTAAATTAGTGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	47034510	47031897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_47032202_47034468
ENSMUSG00000038225.16_47031898_47052901_1	chr8	-	1267	9	ISM	ENSMUSG00000038225.16	ENSMUST00000209787.2	1833	14	17342	0	10780	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	690	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTAAATTAGTGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	47052901	47031897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753
ENSMUSG00000038225.16_47031898_47063560_1	chr8	-	1576	12	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	121	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTAAATTAGTGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	47063560	47031897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039727_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474
ENSMUSG00000038225.16_47031898_47063621_1	chr8	-	1636	12	NNC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1118	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTAAATTAGTGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	47063621	47031897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039727_47043249_47043339_47045628_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474
ENSMUSG00000038225.16_47032025_47058249_1	chr8	-	1270	10	ISM	ENSMUSG00000038225.16	ENSMUST00000209787.2	1833	14	11994	127	5432	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCCTTGGTTCAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	47058249	47032024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119
ENSMUSG00000038225.16_47032025_47063621_1	chr8	-	1510	12	NIC	ENSMUSG00000038225.16	novel	1731	12	NA	NA	60	-124	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCCTTGGTTCAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	47063621	47032024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039727_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474
ENSMUSG00000038225.16_47032025_47063694_1	chr8	-	1583	12	NIC	ENSMUSG00000038225.16	novel	1731	12	NA	NA	-13	-124	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCCTTGGTTCAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	47063694	47032024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039727_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474
ENSMUSG00000038225.16_47032154_47060862_1	chr8	-	1165	11	ISM	ENSMUSG00000038225.16	ENSMUST00000209787.2	1833	14	9381	256	2819	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATTCTCAAACCCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	47060862	47032153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838
ENSMUSG00000038225.16_47034601_47063560_1	chr8	-	1232	10	ISM	ENSMUSG00000038225.16	ENST00000503752.5	1703	12	121	2700	121	-2700	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTATTAATTTTTATATT	NA	NA	NA	NA	NA	NA	NA	NA	47063560	47034600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474
ENSMUSG00000038225.16_47039688_47063694_1	chr8	-	1126	8	ISM	ENSMUSG00000038225.16	ENST00000503752.5	1703	12	-13	7787	-13	-7787	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAATTTGTTCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	47063694	47039687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474
ENSMUSG00000038227.16_52201101_52202925_1	chr6	-	780	2	FSM	ENSMUSG00000038227.16	ENSMUST00000048680.8	3226	2	1425	1021	159	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCATCTCCCCACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	52202925	52201100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_52201463_52202507
ENSMUSG00000038227.16_52201303_52202925_1	chr6	-	405	3	FSM	ENSMUSG00000038227.16	ENSMUST00000114425.3	851	3	244	202	159	-79	multi-exon	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCAGGTCAAGATCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	52202925	52201302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_52201463_52202507_52202598_52202770
ENSMUSG00000038227.16_52201303_52202925_2	chr6	-	398	3	NNC	ENSMUSG00000038227.16	novel	851	3	NA	NA	159	-79	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCAGGTCAAGATCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	52202925	52201302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_52201463_52202507_52202591_52202770
ENSMUSG00000038227.16_52201303_52202981_1	chr6	-	634	2	FSM	ENSMUSG00000038227.16	ENSMUST00000048680.8	3226	2	1369	1223	103	-79	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCAGGTCAAGATCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	52202981	52201302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_52201463_52202507
ENSMUSG00000038227.16_52202509_52203068_1	chr6	-	383	2	ISM	ENSMUSG00000038227.16	ENST00000673917.1	639	3	16	1285	16	-1285	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAAGTGTCTCCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	52203068	52202508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_52202598_52202774
ENSMUSG00000038235.5_171265147_171290682_1	chr1	+	972	9	NIC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	44	-1489	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTTGCCTTACTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	171265146	171290682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290456_171290509_171290626
ENSMUSG00000038235.5_171288425_171290994_1	chr1	+	956	6	NIC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	23322	-1177	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTGAATAAGGACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	171288424	171290994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290456_171290509_171290626
ENSMUSG00000038235.5_171288493_171291032_1	chr1	+	926	6	NIC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	23390	-1139	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCCCCGGATGGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	171288492	171291032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290456_171290509_171290626
ENSMUSG00000038235.5_171288801_171291213_1	chr1	+	1024	5	NIC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	23698	-958	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAGCTCCCAAGAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	171288800	171291213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_171288975_171289130_171289234_171289372_171289481_171290456_171290509_171290626
ENSMUSG00000038235.5_171288905_171291214_1	chr1	+	921	5	NIC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	23802	-957	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGCTCCCAAGAGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	171288904	171291214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_171288975_171289130_171289234_171289372_171289481_171290456_171290509_171290626
ENSMUSG00000038235.5_171289167_171291336_1	chr1	+	941	4	NNC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	24064	-835	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGGATGGAGAAGATACG	NA	NA	NA	NA	NA	NA	NA	NA	171289166	171291336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_171289234_171289372_171289485_171290456_171290509_171290626
ENSMUSG00000038235.5_171289416_171291438_1	chr1	+	933	3	NNC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	24313	-733	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	171289415	171291438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_171289485_171290456_171290509_171290626
ENSMUSG00000038236.9_52191695_52194103_1	chr6	-	1410	2	FSM	ENSMUSG00000038236.9	ENSMUST00000048715.9	2009	2	382	217	329	-217	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTTTGGAAGGATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	52194103	52191694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_52193011_52194009
ENSMUSG00000038236.9_52191842_52194235_1	chr6	-	1395	2	FSM	ENSMUSG00000038236.9	ENSMUST00000048715.9	2009	2	250	364	197	-364	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGCTTTTGTGTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	52194235	52191841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_52193011_52194009
ENSMUSG00000038236.9_52192007_52194432_1	chr6	-	1427	2	FSM	ENSMUSG00000038236.9	ENSMUST00000048715.9	2009	2	53	529	0	-529	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTAACCTAGAATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	52194432	52192006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_52193011_52194009
ENSMUSG00000038240.14_43097596_43316605_3	chr10	+	2020	8	FSM	ENSMUSG00000038240.14	ENSMUST00000095725.11	2127	8	114	-7	0	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGCCTTTCTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	43097595	43316605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_43098057_43174794_43174930_43221523_43221723_43248130_43248206_43269866_43270041_43271556_43271689_43289510_43289544_43315794
ENSMUSG00000038244.15_111870506_111910597_1	chr7	+	773	5	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	0	42585	0	-42585	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCCAAGGTGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	111870505	111910597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111870777_111902794_111903003_111906210_111906328_111908632_111908735_111910522
ENSMUSG00000038244.15_111870613_111914205_1	chr7	+	774	6	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	107	38977	107	-38977	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGACAGTACCCACTAC	NA	NA	NA	NA	NA	NA	NA	NA	111870612	111914205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111870777_111902794_111903003_111906210_111906328_111908632_111908735_111910522_111910679_111914178
ENSMUSG00000038244.15_111870695_111914234_1	chr7	+	721	6	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	189	38948	189	-38948	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCCAAGAAGCAGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	111870694	111914234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111870777_111902794_111903003_111906210_111906328_111908632_111908735_111910522_111910679_111914178
ENSMUSG00000038244.15_111870752_111914279_1	chr7	+	709	6	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	246	38903	246	-38903	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTACCTGTTGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	111870751	111914279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111870777_111902794_111903003_111906210_111906328_111908632_111908735_111910522_111910679_111914178
ENSMUSG00000038244.15_111902828_111917717_1	chr7	+	776	6	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	32322	35465	32322	-35465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCACAACGGGCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	111902827	111917717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111903003_111906210_111906328_111908632_111908735_111910522_111910679_111914178_111914280_111917592
ENSMUSG00000038244.15_111902923_111917763_1	chr7	+	727	6	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	32417	35419	32417	-35419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATGCCTCAGAGAACGC	NA	NA	NA	NA	NA	NA	NA	NA	111902922	111917763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111903003_111906210_111906328_111908632_111908735_111910522_111910679_111914178_111914280_111917592
ENSMUSG00000038244.15_111902980_111917819_1	chr7	+	726	6	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	32474	35363	32474	-35363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCTCTTGTGGGCGACA	NA	NA	NA	NA	NA	NA	NA	NA	111902979	111917819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111903003_111906210_111906328_111908632_111908735_111910522_111910679_111914178_111914280_111917592
ENSMUSG00000038244.15_111906278_111918948_1	chr7	+	697	6	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	35772	34234	35772	-34234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGCTTCCTGGCAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	111906277	111918948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111906328_111908632_111908735_111910522_111910679_111914178_111914280_111917592_111917851_111918918
ENSMUSG00000038244.15_111908689_111919872_1	chr7	+	736	6	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	38183	33310	38183	-33310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTACACATTGGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	111908688	111919872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111908735_111910522_111910679_111914178_111914280_111917592_111917851_111918918_111919035_111919813
ENSMUSG00000038244.15_111917648_111922721_1	chr7	+	722	6	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	47142	30461	47142	-30461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACCAACTGGCATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	111917647	111922721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111917851_111918918_111919035_111919813_111919941_111920552_111920644_111921722_111921871_111922684
ENSMUSG00000038244.15_111917701_111922770_1	chr7	+	718	6	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	47195	30412	47195	-30412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGACCACAGGCAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	111917700	111922770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111917851_111918918_111919035_111919813_111919941_111920552_111920644_111921722_111921871_111922684
ENSMUSG00000038244.15_111917752_111922833_1	chr7	+	730	6	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	47246	30349	47246	-30349	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTCCAAGTTCTATGAG	NA	NA	NA	NA	NA	NA	NA	NA	111917751	111922833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111917851_111918918_111919035_111919813_111919941_111920552_111920644_111921722_111921871_111922684
ENSMUSG00000038244.15_111918917_111923288_1	chr7	+	791	6	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	48411	29894	48411	-29894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTCAGGCCAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	111918916	111923288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111919035_111919813_111919941_111920552_111920644_111921722_111921871_111922684_111922885_111923181
ENSMUSG00000038244.15_111919816_111931131_1	chr7	+	769	7	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	49310	22051	-47699	-22051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGTCAAGAGTATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	111919815	111931131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111919941_111920552_111920644_111921722_111921871_111922684_111922885_111923181_111923289_111927858_111927928_111931102
ENSMUSG00000038244.15_111919898_111931162_1	chr7	+	718	7	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	49392	22020	-47617	-22020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCAGAACAAGGTCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	111919897	111931162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111919941_111920552_111920644_111921722_111921871_111922684_111922885_111923181_111923289_111927858_111927928_111931102
ENSMUSG00000038244.15_111920551_111931282_1	chr7	+	797	6	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	50045	21900	-46964	-21900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCAGAGTCTTTCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	111920550	111931282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111920644_111921722_111921871_111922684_111922885_111923181_111923289_111927858_111927928_111931102
ENSMUSG00000038244.15_111921722_111944561_1	chr7	+	814	6	ISM	ENSMUSG00000038244.15	ENST00000527546.5	3187	20	51237	8972	-45793	-8621	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAAATGCACTGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	111921721	111944561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111921871_111922684_111922885_111923181_111923289_111927858_111927928_111931102_111931283_111944452
ENSMUSG00000038244.15_111922714_111946048_1	chr7	+	755	6	ISM	ENSMUSG00000038244.15	ENST00000527546.5	3187	20	52229	7485	-44801	-7134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCGTTGCAGCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	111922713	111946048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111922885_111923181_111923289_111927858_111927928_111931102_111931283_111944452_111944561_111945928
ENSMUSG00000038244.15_111922855_111948648_1	chr7	+	729	7	ISM	ENSMUSG00000038244.15	ENST00000527546.5	3187	20	52370	4885	-44660	-4534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCGAAAGAGACGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	111922854	111948648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111922885_111923181_111923289_111927858_111927928_111931102_111931283_111944452_111944561_111945928_111946116_111948600
ENSMUSG00000038244.15_111944452_111953311_1	chr7	+	694	5	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	73946	-129	-23063	129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCATGGGGCGGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	111944451	111953311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111944561_111945928_111946116_111948600_111948690_111950531_111950635_111953105
ENSMUSG00000038244.15_111944488_111953387_1	chr7	+	734	5	ISM	ENSMUSG00000038244.15	ENST00000527546.5	3187	20	74003	146	-23027	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAACAAGTGCATGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	111944487	111953387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111944561_111945928_111946116_111948600_111948690_111950531_111950635_111953105
ENSMUSG00000038244.15_111944539_111953439_1	chr7	+	735	5	ISM	ENSMUSG00000038244.15	ENST00000527546.5	3187	20	74054	94	-22976	-94	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCATGTTGCGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	111944538	111953439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111944561_111945928_111946116_111948600_111948690_111950531_111950635_111953105
ENSMUSG00000038250.10_81706966_81740838_1	chr8	-	4180	10	FSM	ENSMUSG00000038250.10	ENST00000682469.1	4435	10	249	6	249	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATTCAGAAAGTAGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	81740838	81706965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_81707239_81707340_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81731960_81732091_81738795_81738932_81740383
ENSMUSG00000038250.10_81707071_81740966_1	chr8	-	4203	10	FSM	ENSMUSG00000038250.10	ENST00000682469.1	4435	10	121	111	121	-111	multi-exon	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTAAGGTTTATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	81740966	81707070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_81707239_81707340_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81731960_81732091_81738795_81738932_81740383
ENSMUSG00000038250.10_81707141_81741002_1	chr8	-	4169	10	FSM	ENSMUSG00000038250.10	ENST00000682469.1	4435	10	85	181	85	-181	multi-exon	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCATGTATTGTTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	81741002	81707140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_81707239_81707340_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81731960_81732091_81738795_81738932_81740383
ENSMUSG00000038250.10_81707362_81740933_1	chr8	-	4083	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	624	0	154	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTACTGTCCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	81740933	81707361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
ENSMUSG00000038250.10_81707784_81741373_1	chr8	-	4101	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	184	422	-118	-422	multi-exon	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAGGGAGTGTATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	81741373	81707783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
ENSMUSG00000038250.10_81707850_81741542_1	chr8	-	4204	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	15	488	15	-488	multi-exon	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGGGCAGGGGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	81741542	81707849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
ENSMUSG00000038250.10_81727682_81741145_1	chr8	-	1130	4	ISM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	412	20320	-58	-20320	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACGGTGGAAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	81741145	81727681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_81727784_81731960_81732091_81738795_81738932_81740383
ENSMUSG00000038256.16_97111528_97114626_1	chr3	-	1930	2	ISM	ENSMUSG00000038256.16	ENSMUST00000166341.2	4652	7	9197	-416	9197	416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTTTTAAAAATACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	97114626	97111527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97113294_97114462
ENSMUSG00000038256.16_97112496_97116671_1	chr3	-	1937	3	ISM	ENSMUSG00000038256.16	ENSMUST00000166341.2	4652	7	7152	552	7152	-552	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCCAGCAAGGCATGATG	NA	NA	NA	NA	NA	NA	NA	NA	97116671	97112495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97113294_97114462_97114724_97115793
ENSMUSG00000038256.16_97114482_97117461_1	chr3	-	1910	2	ISM	ENSMUSG00000038256.16	ENSMUST00000166341.2	4652	7	6362	2538	6362	-2538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGAATAGCATGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	97117461	97114481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97114724_97115793
ENSMUSG00000038256.16_97114535_97117523_1	chr3	-	1919	2	ISM	ENSMUSG00000038256.16	ENSMUST00000166341.2	4652	7	6300	2591	6300	-2591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGCCAGCTCCGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	97117523	97114534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97114724_97115793
ENSMUSG00000038256.16_97114579_97117593_1	chr3	-	1945	2	ISM	ENSMUSG00000038256.16	ENSMUST00000166341.2	4652	7	6230	2635	6230	-2635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGATGCCCAGTTCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	97117593	97114578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97114724_97115793
ENSMUSG00000038256.16_97116242_97121029_1	chr3	-	1920	3	ISM	ENSMUSG00000038256.16	ENSMUST00000166341.2	4652	7	2794	4298	2794	-4298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTACCTCTCAACCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	97121029	97116241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97118033_97120187_97120288_97121000
ENSMUSG00000038256.16_97116286_97121088_1	chr3	-	1935	3	ISM	ENSMUSG00000038256.16	ENSMUST00000166341.2	4652	7	2735	4342	2735	-4342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGCCCGACCAAAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	97121088	97116285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97118033_97120187_97120288_97121000
ENSMUSG00000038256.16_97116323_97121160_1	chr3	-	1970	3	ISM	ENSMUSG00000038256.16	ENSMUST00000166341.2	4652	7	2663	4379	2663	-4379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCAACAGTGGCTTGCG	NA	NA	NA	NA	NA	NA	NA	NA	97121160	97116322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97118033_97120187_97120288_97121000
ENSMUSG00000038256.16_97116468_97122714_1	chr3	-	1920	4	ISM	ENSMUSG00000038256.16	ENST00000684121.1	5574	8	6460	5470	1109	-4524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTGAGGAGATGATGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	97122714	97116467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97118033_97120187_97120288_97121000_97121191_97122649
ENSMUSG00000038256.16_97116701_97123823_1	chr3	-	1912	5	ISM	ENSMUSG00000038256.16	ENST00000684121.1	5574	8	5351	5703	0	-4757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGCCACATGGAGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	97123823	97116700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97118033_97120187_97120288_97121000_97121191_97122649_97122745_97123628
ENSMUSG00000038256.16_97116701_97123942_1	chr3	-	2031	5	ISM	ENSMUSG00000038256.16	ENST00000684121.1	5574	8	5232	5703	-119	-4757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGCCACATGGAGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	97123942	97116700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97118033_97120187_97120288_97121000_97121191_97122649_97122745_97123628
ENSMUSG00000038256.16_97116854_97129142_1	chr3	-	1925	6	ISM	ENSMUSG00000038256.16	ENST00000684121.1	5574	8	32	5856	32	-4910	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCGAGGGGAGCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	97129142	97116853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97118033_97120187_97120288_97121000_97121191_97122649_97122745_97123628_97123942_97129094
ENSMUSG00000038256.16_97117512_97122633_1	chr3	-	1017	4	ISM	ENSMUSG00000038256.16	ENSMUST00000166341.2	4652	7	1190	5568	1190	-5568	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAGATGGACCTCAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	97122633	97117511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97118033_97120187_97120288_97121000_97121191_97122427
ENSMUSG00000038256.16_97117779_97123823_1	chr3	-	1056	5	ISM	ENSMUSG00000038256.16	ENSMUST00000166341.2	4652	7	0	5835	0	-5835	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTCAACACCCAACAATC	NA	NA	NA	NA	NA	NA	NA	NA	97123823	97117778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_97118033_97120187_97120288_97121000_97121191_97122427_97122745_97123628
ENSMUSG00000038257.11_56393860_56578387_1	chr8	+	1420	9	NNC	ENSMUSG00000038257.11	novel	1474	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1905	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCTGAAGGCATACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	56393859	56578387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_56394010_56444160_56444289_56458151_56458220_56492616_56492841_56515465_56515549_56538148_56538287_56542018_56542234_56563481_56563626_56578117
ENSMUSG00000038257.11_56393860_56578387_2	chr8	+	1424	9	NNC	ENSMUSG00000038257.11	novel	1474	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCTGAAGGCATACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	56393859	56578387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_56394010_56444160_56444289_56458151_56458220_56492616_56492841_56515465_56515549_56538148_56538287_56542023_56542234_56563481_56563626_56578108
ENSMUSG00000038257.11_56393860_56578387_3	chr8	+	1421	9	NNC	ENSMUSG00000038257.11	novel	1474	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCTGAAGGCATACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	56393859	56578387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_56394010_56444160_56444289_56458151_56458220_56492624_56492841_56515465_56515549_56538148_56538287_56542018_56542234_56563481_56563626_56578108
ENSMUSG00000038257.11_56393860_56578387_4	chr8	+	1429	9	FSM	ENSMUSG00000038257.11	ENST00000340217.5	1558	9	70	59	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCTGAAGGCATACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	56393859	56578387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_56394010_56444160_56444289_56458151_56458220_56492616_56492841_56515465_56515549_56538148_56538287_56542018_56542234_56563481_56563626_56578108
ENSMUSG00000038264.9_57847395_57863028_1	chr9	+	695	6	NIC	ENSMUSG00000038264.9	novel	3302	14	NA	NA	0	-6165	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGATGATAAGATCTACT	NA	NA	NA	NA	NA	NA	NA	NA	57847394	57863028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_57847612_57860818_57860962_57861807_57861901_57862106_57862195_57862342_57862454_57862985
ENSMUSG00000038264.9_57847500_57863080_1	chr9	+	642	6	NIC	ENSMUSG00000038264.9	novel	3297	14	NA	NA	102	-6113	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGAGGCTCCTCTCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	57847499	57863080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_57847612_57860818_57860962_57861807_57861901_57862106_57862195_57862342_57862454_57862985
ENSMUSG00000038264.9_57847562_57861856_1	chr9	+	284	4	ISM	ENSMUSG00000038264.9	ENSMUST00000043059.9	3297	14	166	8292	164	-7337	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTGGCACCAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	57847561	57861856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57847612_57860818_57860962_57861452_57861495_57861807
ENSMUSG00000038264.9_57847591_57863684_1	chr9	+	657	7	NIC	ENSMUSG00000038264.9	novel	3297	14	NA	NA	193	-5509	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTCTGCAGCGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	57847590	57863684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_57847612_57860818_57860962_57861807_57861901_57862106_57862195_57862342_57862454_57862985_57863126_57863623
ENSMUSG00000038264.9_57862161_57864848_1	chr9	+	638	6	ISM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	14763	4345	14763	-4345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGGCTCAGAGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	57862160	57864848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57862195_57862342_57862454_57862985_57863126_57863623_57863809_57864591_57864701_57864789
ENSMUSG00000038264.9_57863033_57867592_1	chr9	+	641	5	ISM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	15635	1601	15635	-1601	internal_fragment	TRUE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAATATCATGGAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	57863032	57867592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57863126_57863623_57863809_57864591_57864701_57864789_57864989_57867537
ENSMUSG00000038264.9_57863093_57867644_1	chr9	+	633	5	ISM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	15695	1549	15695	-1549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATTGGATGCTGACCG	NA	NA	NA	NA	NA	NA	NA	NA	57863092	57867644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57863126_57863623_57863809_57864591_57864701_57864789_57864989_57867537
ENSMUSG00000038264.9_57863665_57867898_1	chr9	+	637	5	ISM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	16267	1295	16267	-1295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTACAGCGGGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	57863664	57867898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57863809_57864591_57864701_57864789_57864989_57867537_57867666_57867841
ENSMUSG00000038264.9_57863723_57867953_1	chr9	+	634	5	ISM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	16325	1240	16325	-1240	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGACCAGGACCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	57863722	57867953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57863809_57864591_57864701_57864789_57864989_57867537_57867666_57867841
ENSMUSG00000038264.9_57863787_57867996_1	chr9	+	613	5	ISM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	16389	1197	16389	-1197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATTGGCCCCAAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	57863786	57867996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57863809_57864591_57864701_57864789_57864989_57867537_57867666_57867841
ENSMUSG00000038264.9_57864665_57868572_1	chr9	+	630	6	ISM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	17267	621	17267	-621	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACCTGCCCCATGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	57864664	57868572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57864701_57864789_57864989_57867537_57867666_57867841_57867997_57868139_57868202_57868522
ENSMUSG00000038264.9_57864897_57868714_1	chr9	+	629	5	ISM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	17499	479	17499	-479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGCTGCGAGGCCCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	57864896	57868714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57864989_57867537_57867666_57867841_57867997_57868139_57868202_57868522
ENSMUSG00000038264.9_57867606_57868872_1	chr9	+	627	4	ISM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	20208	321	20208	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTCACTAGGGCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	57867605	57868872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57867666_57867841_57867997_57868139_57868202_57868522
ENSMUSG00000038264.9_57867880_57868980_1	chr9	+	637	3	ISM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	20482	213	20482	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTTCCAGGGGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	57867879	57868980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57867997_57868139_57868202_57868522
ENSMUSG00000038264.9_57867946_57869035_1	chr9	+	626	3	ISM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	20548	158	20548	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCGCAGGCGGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	57867945	57869035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57867997_57868139_57868202_57868522
ENSMUSG00000038267.16_34365672_34381887_1	chr13	-	2116	5	ISM	ENSMUSG00000038267.16	ENST00000380302.8	2674	9	107359	0	107359	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATCCTGTACCAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	34381887	34365671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784
ENSMUSG00000038267.16_34365852_34388027_1	chr13	-	2064	6	ISM	ENSMUSG00000038267.16	ENST00000380302.8	2674	9	101219	180	101219	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACAGCACCTGGAGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	34388027	34365851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784_34381888_34387899
ENSMUSG00000038267.16_34366023_34483034_1	chr13	-	2117	8	ISM	ENSMUSG00000038267.16	ENST00000380302.8	2674	9	6212	351	6212	-351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTTGAAAATGTGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	34483034	34366022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784_34381888_34387899_34388028_34405885_34406055_34482979
ENSMUSG00000038267.16_34366030_34483038_1	chr13	-	2114	8	ISM	ENSMUSG00000038267.16	ENST00000380302.8	2674	9	6208	358	6208	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGTACTACTTGAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	34483038	34366029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784_34381888_34387899_34388028_34405885_34406055_34482979
ENSMUSG00000038267.16_34366138_34489157_1	chr13	-	2119	9	FSM	ENSMUSG00000038267.16	ENST00000380302.8	2674	9	89	466	89	-466	multi-exon	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACAGCAGCTGTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34489157	34366137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784_34381888_34387899_34388028_34405885_34406055_34482979_34483135_34489140
ENSMUSG00000038267.16_34366194_34489205_1	chr13	-	2111	9	FSM	ENSMUSG00000038267.16	ENST00000380302.8	2674	9	41	522	41	-522	multi-exon	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTACATGATGAGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	34489205	34366193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784_34381888_34387899_34388028_34405885_34406055_34482979_34483135_34489140
ENSMUSG00000038271.18_125122764_125129693_1	chr6	+	644	5	ISM	ENSMUSG00000038271.18	ENSMUST00000119527.8	2840	9	560	9052	550	-9046	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGCATCAACGAGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	125122763	125129693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125122993_125126551_125126613_125126703_125126800_125128347_125128489_125129576
ENSMUSG00000038271.18_125126740_125136095_1	chr6	+	644	6	ISM	ENSMUSG00000038271.18	ENSMUST00000119527.8	2840	9	4536	2650	4526	-2644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGGCCTGGACGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	125126739	125136095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125126800_125128347_125128489_125129576_125129735_125130004_125130126_125130372_125130466_125136024
ENSMUSG00000038274.14_6107874_6108594_1	chr19	+	375	3	ISM	ENSMUSG00000038274.14	ENSMUST00000043074.14	508	5	-99	952	0	-922	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGAGGTGAGTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	6107873	6108594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6108032_6108275_6108356_6108457
ENSMUSG00000038274.14_6107972_6108602_1	chr19	+	285	3	ISM	ENSMUSG00000038274.14	ENSMUST00000043074.14	508	5	-1	944	0	-914	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCTTTTTTTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	6107971	6108602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6108032_6108275_6108356_6108457
ENSMUSG00000038274.14_6107972_6109229_1	chr19	+	341	4	ISM	ENSMUSG00000038274.14	ENSMUST00000043074.14	508	5	-1	317	0	-287	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGATTGGTGTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	6107971	6109229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6108032_6108275_6108356_6108457_6108603_6109173
ENSMUSG00000038274.14_6108458_6109549_1	chr19	+	372	3	ISM	ENSMUSG00000038274.14	ENSMUST00000237840.2	472	4	205	-3	205	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGTTTTCTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	6108457	6109549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6108603_6109173_6109230_6109378
ENSMUSG00000038274.14_6108509_6109516_1	chr19	+	288	3	ISM	ENSMUSG00000038274.14	ENSMUST00000237840.2	472	4	256	30	256	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGCCATGCTAATAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	6108508	6109516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6108603_6109173_6109230_6109378
ENSMUSG00000038279.11_125108872_125121716_1	chr6	+	2597	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	5046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	125108871	125121716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114174_125114268_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ENSMUSG00000038279.11_125108872_125121716_2	chr6	+	2596	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	4909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	125108871	125121716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114173_125114268_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ENSMUSG00000038279.11_125108872_125121716_3	chr6	+	2600	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	125108871	125121716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114190_125114281_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ENSMUSG00000038279.11_125109177_125111535_1	chr6	+	452	4	FSM	ENSMUSG00000038279.11	ENST00000540228.1	454	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCCCAGCACCAATTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	125109176	125111535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_125109282_125110481_125110528_125110676_125110855_125111412
ENSMUSG00000038279.11_125109177_125111535_2	chr6	+	451	4	NNC	ENSMUSG00000038279.11	novel	454	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCCCAGCACCAATTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	125109176	125111535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_125109282_125110481_125110528_125110676_125110854_125111412
ENSMUSG00000038279.11_125109177_125111535_3	chr6	+	447	4	NNC	ENSMUSG00000038279.11	novel	454	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCCCAGCACCAATTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	125109176	125111535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_125109282_125110481_125110528_125110681_125110855_125111412
ENSMUSG00000038279.11_125109177_125111535_4	chr6	+	315	4	ISM	ENSMUSG00000038279.11	ENST00000322166.10	1799	14	2	6935	2	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCCCAGCACCAATTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	125109176	125111535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125109282_125110481_125110528_125110676_125110766_125111460
ENSMUSG00000038279.11_125110676_125111709_1	chr6	+	339	2	ISM	ENSMUSG00000038279.11	ENST00000322166.10	1799	14	1501	6761	1501	174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCTCAAGTAGATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	125110675	125111709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125110766_125111460
ENSMUSG00000038279.11_125111594_125114069_1	chr6	+	283	3	ISM	ENSMUSG00000038279.11	ENST00000620535.4	1873	14	2419	4401	2419	2534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTGAGTCCCACCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	125111593	125114069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125111710_125113816_125113932_125114017
ENSMUSG00000038279.11_125111643_125114121_1	chr6	+	286	3	ISM	ENSMUSG00000038279.11	ENST00000620535.4	1873	14	2468	4349	2468	2586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGTGGAAGATGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	125111642	125114121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125111710_125113816_125113932_125114017
ENSMUSG00000038279.11_125111689_125114180_1	chr6	+	299	3	ISM	ENSMUSG00000038279.11	ENST00000620535.4	1873	14	2514	4290	2514	2645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTTGAGTGCAGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	125111688	125114180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125111710_125113816_125113932_125114017
ENSMUSG00000038280.13_42568938_42574157_1	chr10	+	289	3	ISM	ENSMUSG00000038280.13	ENSMUST00000040718.6	3006	6	14026	4298	14026	-162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGACACGGTGTCCGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	42568937	42574157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_42569005_42572245_42572414_42574103
ENSMUSG00000038296.15_111070868_111153710_1	chr7	-	1188	7	ISM	ENSMUSG00000038296.15	ENSMUST00000106663.2	2530	11	225474	0	225474	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTCTTCGCGGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	111153710	111070867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_111071291_111084241_111084407_111107259_111107356_111112704_111112843_111119196_111119383_111147882_111147998_111153645
ENSMUSG00000038296.15_111071012_111153788_1	chr7	-	1122	7	ISM	ENSMUSG00000038296.15	ENSMUST00000106663.2	2530	11	225396	144	225396	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTTCCTATTCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	111153788	111071011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_111071291_111084241_111084407_111107259_111107356_111112704_111112843_111119196_111119383_111147882_111147998_111153645
ENSMUSG00000038296.15_111071140_111155606_1	chr7	-	1103	8	ISM	ENSMUSG00000038296.15	ENSMUST00000106663.2	2530	11	223578	272	223578	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGGCGCCACCGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	111155606	111071139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_111071291_111084241_111084407_111107259_111107356_111112704_111112843_111119196_111119383_111147882_111147998_111153645_111153844_111155552
ENSMUSG00000038296.15_111071200_111155672_1	chr7	-	1109	8	ISM	ENSMUSG00000038296.15	ENSMUST00000106663.2	2530	11	223512	332	223512	-332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTCGGGACAACACTGG	NA	NA	NA	NA	NA	NA	NA	NA	111155672	111071199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_111071291_111084241_111084407_111107259_111107356_111112704_111112843_111119196_111119383_111147882_111147998_111153645_111153844_111155552
ENSMUSG00000038296.15_111071258_111155718_1	chr7	-	1097	8	ISM	ENSMUSG00000038296.15	ENSMUST00000106663.2	2530	11	223466	390	223466	-390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTGGAGCTGCAAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	111155718	111071257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_111071291_111084241_111084407_111107259_111107356_111112704_111112843_111119196_111119383_111147882_111147998_111153645_111153844_111155552
ENSMUSG00000038296.15_111084258_111198197_1	chr7	-	1100	8	ISM	ENSMUSG00000038296.15	ENSMUST00000106663.2	2530	11	180987	13390	180987	-13390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCAGTTCTCCCAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	111198197	111084257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_111084407_111107259_111107356_111112704_111112843_111119196_111119383_111147882_111147998_111153645_111153844_111155552_111155737_111198163
ENSMUSG00000038296.15_111084308_111198250_1	chr7	-	1103	8	ISM	ENSMUSG00000038296.15	ENSMUST00000106663.2	2530	11	180934	13440	180934	-13440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTCTCATCGAGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	111198250	111084307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_111084407_111107259_111107356_111112704_111112843_111119196_111119383_111147882_111147998_111153645_111153844_111155552_111155737_111198163
ENSMUSG00000038296.15_111084369_111198306_1	chr7	-	1098	8	ISM	ENSMUSG00000038296.15	ENSMUST00000106663.2	2530	11	180878	13501	180878	-13501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGAGCCCCACTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	111198306	111084368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_111084407_111107259_111107356_111112704_111112843_111119196_111119383_111147882_111147998_111153645_111153844_111155552_111155737_111198163
ENSMUSG00000038296.15_111107306_111215565_1	chr7	-	1105	8	ISM	ENSMUSG00000038296.15	ENSMUST00000106663.2	2530	11	163619	36438	163619	-36438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAATGTCCCCATCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	111215565	111107305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_111107356_111112704_111112843_111119196_111119383_111147882_111147998_111153645_111153844_111155552_111155737_111198163_111198331_111215498
ENSMUSG00000038296.15_111112802_111215696_1	chr7	-	1089	7	ISM	ENSMUSG00000038296.15	ENSMUST00000106663.2	2530	11	163488	41934	163488	-41934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGGAAGCAGCTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	111215696	111112801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_111112843_111119196_111119383_111147882_111147998_111153645_111153844_111155552_111155737_111198163_111198331_111215498
ENSMUSG00000038296.15_111119217_111378608_1	chr7	-	1112	7	ISM	ENSMUSG00000038296.15	ENSMUST00000106663.2	2530	11	576	48349	576	-48349	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGGAACATACCACAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	111378608	111119216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_111119383_111147882_111147998_111153645_111153844_111155552_111155737_111198163_111198331_111215498_111215692_111378519
ENSMUSG00000038296.15_111119272_111378672_1	chr7	-	1121	7	ISM	ENSMUSG00000038296.15	ENSMUST00000106663.2	2530	11	512	48404	512	-48404	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCAGGGTAGCTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	111378672	111119271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_111119383_111147882_111147998_111153645_111153844_111155552_111155737_111198163_111198331_111215498_111215692_111378519
ENSMUSG00000038296.15_111119341_111378720_1	chr7	-	1100	7	ISM	ENSMUSG00000038296.15	ENSMUST00000106663.2	2530	11	464	48473	464	-48473	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATTGCCCACATCGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	111378720	111119340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_111119383_111147882_111147998_111153645_111153844_111155552_111155737_111198163_111198331_111215498_111215692_111378519
ENSMUSG00000038296.15_111147937_111378893_1	chr7	-	1177	6	ISM	ENSMUSG00000038296.15	ENSMUST00000049430.15	2575	11	291	77069	291	-77069	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACGAAGGCATGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	111378893	111147936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_111147998_111153645_111153844_111155552_111155737_111198163_111198331_111215498_111215692_111378519
ENSMUSG00000038296.15_111153802_111379028_1	chr7	-	1095	5	ISM	ENSMUSG00000038296.15	ENSMUST00000049430.15	2575	11	156	82934	156	-82934	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATTTCACCATCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	111379028	111153801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_111153844_111155552_111155737_111198163_111198331_111215498_111215692_111378519
ENSMUSG00000038296.15_111155594_111379184_1	chr7	-	1168	4	ISM	ENSMUSG00000038296.15	ENSMUST00000049430.15	2575	11	0	84726	0	-84726	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCACTGTTCGATGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	111379184	111155593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_111155737_111198163_111198331_111215498_111215692_111378519
ENSMUSG00000038298.15_96757566_96758971_1	chr3	+	355	2	ISM	ENSMUSG00000038298.15	ENST00000451928.6	1096	5	25	17494	25	-17494	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTGGAGCCGTGTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	96757565	96758971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96757756_96758806
ENSMUSG00000038298.15_96757609_96758979_1	chr3	+	320	2	ISM	ENSMUSG00000038298.15	ENST00000451928.6	1096	5	68	17486	68	-17486	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGTGCCCAGCCACGGC	NA	NA	NA	NA	NA	NA	NA	NA	96757608	96758979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96757756_96758806
ENSMUSG00000038298.15_96757658_96759056_1	chr3	+	348	2	ISM	ENSMUSG00000038298.15	ENST00000451928.6	1096	5	117	17409	117	-17409	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTTGGGGTGAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	96757657	96759056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96757756_96758806
ENSMUSG00000038298.15_96757702_96764548_1	chr3	+	342	3	ISM	ENSMUSG00000038298.15	ENST00000451928.6	1096	5	161	11917	161	-11917	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGCTGGCTTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	96757701	96764548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96757756_96758806_96759057_96764510
ENSMUSG00000038298.15_96758895_96764666_1	chr3	+	318	2	ISM	ENSMUSG00000038298.15	ENST00000451928.6	1096	5	1354	11799	1354	-11799	internal_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGTGCTGGACAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	96758894	96764666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96759057_96764510
ENSMUSG00000038298.15_96758918_96775638_1	chr3	+	351	3	ISM	ENSMUSG00000038298.15	ENST00000451928.6	1096	5	1377	827	1377	-827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTTTACTGCCAAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	96758917	96775638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96759057_96764510_96764708_96775623
ENSMUSG00000038298.15_96759001_96775681_1	chr3	+	311	3	ISM	ENSMUSG00000038298.15	ENST00000451928.6	1096	5	1460	784	1460	-784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGGCCCAGCTCCGATC	NA	NA	NA	NA	NA	NA	NA	NA	96759000	96775681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96759057_96764510_96764708_96775623
ENSMUSG00000038298.15_96764657_96776295_1	chr3	+	315	3	ISM	ENSMUSG00000038298.15	ENST00000451928.6	1096	5	7116	170	7116	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGACGTCATCATCGA	NA	NA	NA	NA	NA	NA	NA	NA	96764656	96776295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96764708_96775623_96775849_96776256
ENSMUSG00000038299.17_32970375_32985944_1	chr18	+	1713	15	ISM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	11	13509	11	-13509	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCATTGCTGTCCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	32970374	32985944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916
ENSMUSG00000038299.17_32970567_32987869_1	chr18	+	1639	16	ISM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	203	11584	203	-11584	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGGATTGCTCTGTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	32970566	32987869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832
ENSMUSG00000038299.17_32974096_32992380_1	chr18	+	1717	15	ISM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	3732	7073	3732	-7073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTCTTCGTACATCTC	NA	NA	NA	NA	NA	NA	NA	NA	32974095	32992380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272
ENSMUSG00000038299.17_32974948_32994177_1	chr18	+	1716	15	ISM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	4584	5276	4584	-5276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATCAAAATAATATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	32974947	32994177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079
ENSMUSG00000038299.17_32976867_32994632_1	chr18	+	1622	15	ISM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	6503	4821	6503	-4821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGTGACTCTCTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	32976866	32994632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554
ENSMUSG00000038299.17_32978644_32996097_1	chr18	+	1729	15	ISM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	8280	3356	8280	-3356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACCAGATGAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	32978643	32996097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977
ENSMUSG00000038299.17_32980249_32997750_1	chr18	+	1614	15	ISM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	9885	1703	9885	-1703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAACAGAGCTGCGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	32980248	32997750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705
ENSMUSG00000038299.17_32980285_32997816_1	chr18	+	1644	15	ISM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	9921	1637	9921	-1637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCATGATTGGAATGATG	NA	NA	NA	NA	NA	NA	NA	NA	32980284	32997816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705
ENSMUSG00000038299.17_32980357_32997856_1	chr18	+	1612	15	ISM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	9993	1597	9993	-1597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTTGGCCCAGGCATACC	NA	NA	NA	NA	NA	NA	NA	NA	32980356	32997856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705
ENSMUSG00000038299.17_32980708_32998954_1	chr18	+	1618	15	ISM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	10344	499	10344	-499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTTGTCATCACAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	32980707	32998954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ENSMUSG00000038299.17_32982188_32999170_1	chr18	+	1651	13	ISM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	11824	283	11824	-283	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTGTAGATGTGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	32982187	32999170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ENSMUSG00000038299.17_32985083_32999453_1	chr18	+	1711	11	ISM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	14719	0	14719	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGGGTTCTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	32985082	32999453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ENSMUSG00000038299.17_32985924_32999651_1	chr18	+	1670	9	ISM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	15560	-198	15560	198	intron_retention	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGATAAGGTTTCATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	32985923	32999651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ENSMUSG00000038299.17_32985992_32999702_1	chr18	+	1653	9	ISM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	15628	-249	15628	249	intron_retention	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGCAAGTGTCTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	32985991	32999702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ENSMUSG00000038299.17_32994153_32999983_1	chr18	+	1639	6	ISM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	23789	-530	23789	530	intron_retention	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGAGACCAGGTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	32994152	32999983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ENSMUSG00000038299.17_32994650_33000103_1	chr18	+	1639	5	ISM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	24372	544	24286	-544	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAGACTCCAGAAAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	32994649	33000103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ENSMUSG00000038299.17_32996060_33000250_1	chr18	+	1653	4	ISM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	25782	397	25696	-397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATTTATACATACATAC	NA	NA	NA	NA	NA	NA	NA	NA	32996059	33000250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32996098_32996233_32996316_32997705_32997894_32998905
ENSMUSG00000038299.17_32997783_33000401_1	chr18	+	1607	2	ISM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	27505	246	27419	-246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGACAGGAAAACGAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	32997782	33000401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32997894_32998905
ENSMUSG00000038299.17_32997845_33000462_1	chr18	+	1606	2	ISM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	27567	185	27481	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGCAGTGACTCATATG	NA	NA	NA	NA	NA	NA	NA	NA	32997844	33000462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_32997894_32998905
ENSMUSG00000038302.15_42189466_42236208_1	chr10	-	622	6	ISM	ENSMUSG00000038302.15	ENSMUST00000041024.15	2513	13	118353	885	118353	-885	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAAGGTGACTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	42236208	42189465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160
ENSMUSG00000038305.16_57813578_57924927_1	chr1	+	409	6	ISM	ENSMUSG00000038305.16	ENST00000409718.5	2643	13	322	61197	54	-61196	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGCCAGAGGTGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	57813577	57924927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_57813651_57838463_57838514_57894622_57894684_57918666_57918776_57921864_57921915_57924861
ENSMUSG00000038312.11_155544125_155571180_1	chr2	-	1436	10	FSM	ENSMUSG00000038312.11	ENST00000374491.3	1754	10	137	181	137	-181	multi-exon	TRUE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGGAGAAGCAGCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	155571180	155544124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155571150
ENSMUSG00000038312.11_155544200_155571218_1	chr2	-	1399	10	FSM	ENSMUSG00000038312.11	ENST00000374491.3	1754	10	99	256	99	-256	multi-exon	FALSE	canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAAGACAGTGAGGTCG	NA	NA	NA	NA	NA	NA	NA	NA	155571218	155544199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155571150
ENSMUSG00000038312.11_155544247_155571273_1	chr2	-	1407	10	FSM	ENSMUSG00000038312.11	ENST00000374491.3	1754	10	44	303	44	-303	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAAGGAGTTCTACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	155571273	155544246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155571150
ENSMUSG00000038312.11_155555368_155571182_1	chr2	-	659	7	ISM	ENSMUSG00000038312.11	ENSMUST00000040833.5	2290	11	213	11771	135	-11424	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGGCCCAGGATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	155571182	155555367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
ENSMUSG00000038324.14_155476349_155477208_1	chr2	-	765	2	ISM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	57044	121	57044	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGGGCATGGAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	155477208	155476348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155477061_155477155
ENSMUSG00000038324.14_155476411_155477253_1	chr2	-	748	2	ISM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	56999	183	56999	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGCCACTGTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	155477253	155476410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155477061_155477155
ENSMUSG00000038324.14_155476478_155477318_1	chr2	-	746	2	ISM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	56934	250	56934	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGGTCTGCCCATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	155477318	155476477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155477061_155477155
ENSMUSG00000038324.14_155476665_155479702_1	chr2	-	841	4	ISM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	54550	437	54550	-437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAATCCTGGAGCCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	155479702	155476664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577
ENSMUSG00000038324.14_155476848_155480072_1	chr2	-	747	5	ISM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	54180	620	54180	-620	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCATCCCTGTCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	155480072	155476847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967
ENSMUSG00000038324.14_155477012_155482460_1	chr2	-	777	7	ISM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	51792	784	51792	-784	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCCAGACCGCCAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	155482460	155477011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393
ENSMUSG00000038324.14_155477156_155483610_1	chr2	-	847	7	ISM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	50642	928	50642	-928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCCCCACCCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	155483610	155477155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508
ENSMUSG00000038324.14_155477289_155486894_1	chr2	-	820	9	ISM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	47358	1061	47358	-1061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCGACTGCTACAGCGAA	NA	NA	NA	NA	NA	NA	NA	NA	155486894	155477288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847
ENSMUSG00000038324.14_155479621_155492414_1	chr2	-	751	8	ISM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	41838	3393	41838	-3393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTCACTGGACCGATT	NA	NA	NA	NA	NA	NA	NA	NA	155492414	155479620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338
ENSMUSG00000038324.14_155479975_155495448_1	chr2	-	805	8	ISM	ENSMUSG00000038324.14	ENSMUST00000041059.12	3204	19	38856	3784	38804	-3747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGGTAGGGCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	155495448	155479974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412
ENSMUSG00000038324.14_155480060_155495473_1	chr2	-	745	8	ISM	ENSMUSG00000038324.14	ENSMUST00000041059.12	3204	19	38831	3869	38779	-3832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGCTACTTTGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	155495473	155480059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412
ENSMUSG00000038324.14_155481393_155495598_1	chr2	-	821	7	ISM	ENSMUSG00000038324.14	ENSMUST00000041059.12	3204	19	38706	5202	38654	-5165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATACTGGAGGAAGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	155495598	155481392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412
ENSMUSG00000038324.14_155482432_155499717_1	chr2	-	754	7	ISM	ENSMUSG00000038324.14	ENSMUST00000041059.12	3204	19	34587	6241	34535	-6204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTCATGAAGAAGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	155499717	155482431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655
ENSMUSG00000038324.14_155483508_155499863_1	chr2	-	855	6	ISM	ENSMUSG00000038324.14	ENSMUST00000041059.12	3204	19	34441	7317	34389	-7280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTTGTGGGGACCGCT	NA	NA	NA	NA	NA	NA	NA	NA	155499863	155483507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655
ENSMUSG00000038324.14_155485345_155505633_1	chr2	-	776	6	ISM	ENSMUSG00000038324.14	ENSMUST00000041059.12	3204	19	28671	9154	28619	-9117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTTCTCCAGAGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	155505633	155485344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576
ENSMUSG00000038324.14_155492406_155513076_1	chr2	-	854	7	ISM	ENSMUSG00000038324.14	ENSMUST00000041059.12	3204	19	21228	16215	21176	-16178	internal_fragment	TRUE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTATGTACAAACTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	155513076	155492405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959
ENSMUSG00000038324.14_155495464_155514971_1	chr2	-	765	7	ISM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	19281	19236	19281	-19236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGATGCCCTGATGCGA	NA	NA	NA	NA	NA	NA	NA	NA	155514971	155495463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909
ENSMUSG00000038324.14_155495516_155515004_1	chr2	-	746	7	ISM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	19248	19288	19248	-19288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCCTTCAAGAACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	155515004	155495515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909
ENSMUSG00000038332.14_41686205_41774250_1	chr10	+	1614	5	ISM	ENSMUSG00000038332.14	ENSMUST00000099931.11	3809	10	274	10170	274	-10170	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCACTCTCTTGCCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	41686204	41774250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41687297_41770037_41770104_41770815_41771017_41772018_41772202_41774178
ENSMUSG00000038332.14_41763435_41778545_1	chr10	+	871	6	ISM	ENSMUSG00000038332.14	ENSMUST00000041438.7	2600	10	0	5875	0	-5875	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAAGCTCTCATGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	41763434	41778545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41763592_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524
ENSMUSG00000038332.14_41770041_41779721_1	chr10	+	872	6	ISM	ENSMUSG00000038332.14	ENSMUST00000041438.7	2600	10	6606	4699	6606	-4699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGCACTTTGAGGACACTA	NA	NA	NA	NA	NA	NA	NA	NA	41770040	41779721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687
ENSMUSG00000038332.14_41770852_41781214_1	chr10	+	897	6	ISM	ENSMUSG00000038332.14	ENSMUST00000041438.7	2600	10	7417	3206	7417	-3206	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAGATGTGGGACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	41770851	41781214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169
ENSMUSG00000038332.14_41770916_41781256_1	chr10	+	875	6	ISM	ENSMUSG00000038332.14	ENSMUST00000041438.7	2600	10	7481	3164	7481	-3164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTACAATCTAACTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	41770915	41781256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169
ENSMUSG00000038332.14_41770963_41781321_1	chr10	+	893	6	ISM	ENSMUSG00000038332.14	ENSMUST00000041438.7	2600	10	7528	3099	7528	-3099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTATCTGGAACTATATCC	NA	NA	NA	NA	NA	NA	NA	NA	41770962	41781321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169
ENSMUSG00000038332.14_41772098_41783916_1	chr10	+	1593	7	ISM	ENSMUSG00000038332.14	ENSMUST00000041438.7	2600	10	8663	504	8663	-504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCATTTCTTTCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	41772097	41783916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
ENSMUSG00000038332.14_41782439_41784119_1	chr10	+	890	2	ISM	ENSMUSG00000038332.14	ENSMUST00000041438.7	2600	10	19004	301	19004	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAACAATGTGGAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	41782438	41784119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41782477_41783267
ENSMUSG00000038335.14_74789240_74791047_1	chr11	+	187	3	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	295	8095	295	-8095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGTGGAGAAACGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	74789239	74791047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74789307_74790007_74790059_74790978
ENSMUSG00000038335.14_74789289_74791101_1	chr11	+	192	3	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	344	8041	344	-8041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAATCAGGAATGCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	74789288	74791101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74789307_74790007_74790059_74790978
ENSMUSG00000038335.14_74791368_74792448_1	chr11	+	170	2	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	2423	6694	2423	-6694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGAAGAGCTGGATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	74791367	74792448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74791404_74792314
ENSMUSG00000038335.14_74792455_74794760_1	chr11	+	203	3	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	3510	4382	3510	-4382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAATATAAACAAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	74792454	74794760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74792479_74792928_74792993_74794645
ENSMUSG00000038335.14_74794796_74795766_1	chr11	+	156	2	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	5851	3376	5851	-3376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAGAATTTTTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	74794795	74795766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74794840_74795654
ENSMUSG00000038335.14_74795781_74796142_1	chr11	+	148	2	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	6836	3000	6836	-3000	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCAGTGTTTTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	74795780	74796142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74795818_74796031
ENSMUSG00000038335.14_74798737_74799140_1	chr11	+	216	3	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	9792	2	9792	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGTGGACTTATGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	74798736	74799140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_74798791_74798871_74798947_74799053
ENSMUSG00000038365.9_13964960_13989586_1	chr8	+	949	8	FSM	ENSMUSG00000038365.9	ENST00000276326.9	1536	8	17	570	17	-570	multi-exon	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACCCCGACAGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	13964959	13989586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_13965085_13970947_13971049_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
ENSMUSG00000038365.9_13965014_13989635_1	chr8	+	944	8	FSM	ENSMUSG00000038365.9	ENST00000276326.9	1536	8	71	521	71	-521	multi-exon	FALSE	canonical	NA	NA	NA	NA	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTCAAGTTCTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	13965013	13989635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_13965085_13970947_13971049_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
ENSMUSG00000038365.9_13965063_13989695_1	chr8	+	955	8	FSM	ENSMUSG00000038365.9	ENST00000276326.9	1536	8	120	461	120	-461	multi-exon	FALSE	canonical	NA	NA	NA	NA	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCTGTGTCGTGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	13965062	13989695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_13965085_13970947_13971049_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
ENSMUSG00000038365.9_13973925_13989856_1	chr8	+	993	6	ISM	ENSMUSG00000038365.9	ENST00000276326.9	1536	8	8982	300	8982	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGACTCCATTTGTACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	13973924	13989856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
ENSMUSG00000038365.9_13976979_13985214_1	chr8	+	497	4	ISM	ENSMUSG00000038365.9	ENSMUST00000209913.2	2035	11	19176	5307	12036	-4942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATTACCCGACCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	13976978	13985214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13977042_13979255_13979441_13981184_13981365_13985145
ENSMUSG00000038365.9_13976979_13989960_1	chr8	+	973	5	ISM	ENSMUSG00000038365.9	ENST00000276326.9	1536	8	12036	196	12036	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATATTTTGTGCTGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	13976978	13989960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
ENSMUSG00000038365.9_13979294_13990084_1	chr8	+	996	4	ISM	ENSMUSG00000038365.9	ENST00000276326.9	1536	8	14351	72	14351	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAATATTTATTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	13979293	13990084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13979441_13981181_13981365_13985145_13985290_13989562
ENSMUSG00000038365.9_13981180_13990156_1	chr8	+	923	3	ISM	ENSMUSG00000038365.9	ENST00000276326.9	1536	8	16237	0	16237	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGAGATGGAGCTAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	13981179	13990156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13981365_13985145_13985290_13989562
ENSMUSG00000038366.16_97690498_97727675_1	chr11	+	1518	7	FSM	ENSMUSG00000038366.16	ENSMUST00000043843.12	3540	7	107	1915	107	340	multi-exon	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACATCCCCAGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	97690497	97727675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ENSMUSG00000038366.16_97690664_97727336_1	chr11	+	928	6	FSM	ENSMUSG00000038366.16	ENST00000433206.6	1259	6	332	-1	273	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCTGAGCTAGGTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	97690663	97727336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_97690689_97697650_97697746_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ENSMUSG00000038366.16_97690664_97727850_1	chr11	+	1527	7	FSM	ENSMUSG00000038366.16	ENSMUST00000043843.12	3540	7	273	1740	273	515	multi-exon	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACACACCTAGGGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	97690663	97727850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ENSMUSG00000038366.16_97715665_97728069_1	chr11	+	1544	4	ISM	ENSMUSG00000038366.16	ENST00000433206.6	1259	6	25333	-734	25274	734	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGCTGTTTGTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	97715664	97728069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97715776_97724371_97724529_97724909_97725014_97726897
ENSMUSG00000038366.16_97724931_97728332_1	chr11	+	1518	2	ISM	ENSMUSG00000038366.16	ENST00000433206.6	1259	6	34599	-997	34540	997	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCACCTGAGGCTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	97724930	97728332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97725014_97726897
ENSMUSG00000038366.16_97724999_97728371_1	chr11	+	1489	2	ISM	ENSMUSG00000038366.16	ENST00000433206.6	1259	6	34667	-1036	34608	1036	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGGGCTTCAAAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	97724998	97728371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97725014_97726897
ENSMUSG00000038369.15_155232751_155237688_1	chr2	-	439	2	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	45015	175	45015	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGGGGCAAAACGCAATC	NA	NA	NA	NA	NA	NA	NA	NA	155237688	155232750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155233141_155237639
ENSMUSG00000038369.15_155233072_155247456_1	chr2	-	389	5	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	35247	496	35247	-487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAATGTGTGTGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	155247456	155233071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155247394
ENSMUSG00000038369.15_155233125_155247518_1	chr2	-	398	5	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	35185	549	35185	-540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAATCCAAGCGAAGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	155247518	155233124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155247394
ENSMUSG00000038369.15_155237732_155247622_1	chr2	-	394	4	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	35081	5156	35081	-5147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAGGAGCCAACTATGG	NA	NA	NA	NA	NA	NA	NA	NA	155247622	155237731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155237792_155241574_155241612_155244591_155244661_155247394
ENSMUSG00000038369.15_155237775_155247684_1	chr2	-	413	4	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	35019	5199	35019	-5190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTTGAGAAGTCCAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	155247684	155237774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155237792_155241574_155241612_155244591_155244661_155247394
ENSMUSG00000038369.15_155250055_155253521_1	chr2	-	393	2	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	29182	17479	29182	3386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGGTTTGCAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	155253521	155250054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155250371_155253444
ENSMUSG00000038369.15_155250187_155256822_1	chr2	-	397	3	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	25881	17611	25881	3254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGCTCATGATGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	155256822	155250186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155250371_155253444_155253567_155256731
ENSMUSG00000038369.15_155250241_155256895_1	chr2	-	416	3	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	25808	17665	25808	3200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCACCTAGTCAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	155256895	155250240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155250371_155253444_155253567_155256731
ENSMUSG00000038369.15_155250310_155256948_1	chr2	-	400	3	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	25755	17734	25755	3131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTCGCACCCCCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	155256948	155250309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155250371_155253444_155253567_155256731
ENSMUSG00000038369.15_155253441_155263438_1	chr2	-	1942	4	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	19265	20865	19265	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGATACTAGCTAAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	155263438	155253440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155253567_155256731_155257849_155260797_155260945_155262886
ENSMUSG00000038369.15_155253489_155263511_1	chr2	-	1967	4	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	19192	20913	19192	-48	internal_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACAGGCCCCAAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	155263511	155253488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155253567_155256731_155257849_155260797_155260945_155262886
ENSMUSG00000038369.15_155257045_155264819_1	chr2	-	1943	4	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	17884	24469	17884	-3604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTCCCCCCACATGTG	NA	NA	NA	NA	NA	NA	NA	NA	155264819	155257044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155257849_155260797_155260945_155262886_155263790_155264730
ENSMUSG00000038369.15_155257171_155274829_1	chr2	-	1951	5	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	7874	24595	7874	-3730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGTTCTGCGGCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	155274829	155257170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735
ENSMUSG00000038369.15_155257415_155279847_1	chr2	-	1960	7	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	2856	24839	2856	-3974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTTGCTCCAGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	155279847	155257414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779
ENSMUSG00000038369.15_155257551_155279970_1	chr2	-	1947	7	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	2733	24975	2733	-4110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGATGATGGTGAACG	NA	NA	NA	NA	NA	NA	NA	NA	155279970	155257550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779
ENSMUSG00000038369.15_155257780_155315602_1	chr2	-	1948	9	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	114	-4339	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCATGGGAATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	155315602	155257779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
ENSMUSG00000038369.15_155260796_155315726_1	chr2	-	2005	8	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	0	1401	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGCTTTCGTTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	155315726	155260795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
ENSMUSG00000038369.15_155279930_155310500_1	chr2	-	378	4	NIC	ENSMUSG00000038369.15	novel	7174	16	NA	NA	132	-17733	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTGGACTAGAAGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	155310500	155279929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_155280060_155282607_155282706_155291202_155291272_155310419
ENSMUSG00000038372.15_32003562_32522444_1	chr13	-	1434	11	FSM	ENSMUSG00000038372.15	ENSMUST00000041859.9	1713	11	279	0	279	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTTGCTGTGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	32522444	32003561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_32003962_32004124_32004194_32101602_32101700_32124466_32124586_32284339_32284468_32310982_32311088_32311889_32312083_32409117_32409228_32411197_32411286_32418335_32418381_32522364
ENSMUSG00000038372.15_32003562_32522585_2	chr13	-	1575	11	FSM	ENSMUSG00000038372.15	ENSMUST00000041859.9	1713	11	138	0	138	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTTGCTGTGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	32522585	32003561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_32003962_32004124_32004194_32101602_32101700_32124466_32124586_32284339_32284468_32310982_32311088_32311889_32312083_32409117_32409228_32411197_32411286_32418335_32418381_32522364
ENSMUSG00000038374.11_96537256_96539275_1	chr3	+	772	6	FSM	ENSMUSG00000038374.11	ENSMUST00000196456.5	2604	6	0	1832	0	-1832	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGATCCTTCTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	96537255	96539275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_96537345_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539004
ENSMUSG00000038379.16_83721338_83725176_1	chr9	+	279	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	94	26157	94	-26157	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGGGCGGTGCCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	83721337	83725176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83721467_83721778_83721886_83725133
ENSMUSG00000038379.16_83721357_83744243_1	chr9	+	1371	13	ISM	ENSMUSG00000038379.16	ENST00000509894.5	2331	19	113	7090	113	-7090	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAACGCTATCAAATATG	NA	NA	NA	NA	NA	NA	NA	NA	83721356	83744243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735094_83735229_83736855_83736994_83739377_83739464_83744214
ENSMUSG00000038379.16_83721390_83725229_1	chr9	+	280	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	146	26104	146	-26104	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGAAAAAGCAGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	83721389	83725229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83721467_83721778_83721886_83725133
ENSMUSG00000038379.16_83721409_83744292_1	chr9	+	1368	13	ISM	ENSMUSG00000038379.16	ENST00000509894.5	2331	19	165	7041	165	-7041	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGAGCTACCGCAACGA	NA	NA	NA	NA	NA	NA	NA	NA	83721408	83744292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735094_83735229_83736855_83736994_83739377_83739464_83744214
ENSMUSG00000038379.16_83721853_83744557_1	chr9	+	1373	13	ISM	ENSMUSG00000038379.16	ENST00000509894.5	2331	19	609	6776	609	-6776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTTGGCTTAAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	83721852	83744557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735094_83735229_83736855_83736994_83739377_83739464_83744214_83744373_83744500
ENSMUSG00000038379.16_83725210_83726142_1	chr9	+	299	4	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	3966	25191	3966	-25191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTTCTATGTGAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	83725209	83726142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83725278_83725680_83725796_83725936_83726010_83726099
ENSMUSG00000038379.16_83725210_83745514_1	chr9	+	1376	13	ISM	ENSMUSG00000038379.16	ENST00000509894.5	2331	19	3966	5819	3966	-5819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGCCTGCTAACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	83725209	83745514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735094_83735229_83736855_83736994_83739377_83739464_83744214_83744373_83744500_83744653_83745497
ENSMUSG00000038379.16_83725678_83745624_1	chr9	+	1421	12	ISM	ENSMUSG00000038379.16	ENST00000509894.5	2331	19	4434	5709	4434	-5709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTTTTGCTGTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	83725677	83745624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735094_83735229_83736855_83736994_83739377_83739464_83744214_83744373_83744500_83744653_83745497
ENSMUSG00000038379.16_83729236_83751273_1	chr9	+	1381	12	ISM	ENSMUSG00000038379.16	ENST00000509894.5	2331	19	7992	60	7992	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1834	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTTGGGTCAACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	83729235	83751273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83729306_83732624_83732762_83735094_83735229_83736855_83736994_83739377_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235
ENSMUSG00000038379.16_83729243_83735151_1	chr9	+	260	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	7999	16182	7999	-16182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTCCTAAATGGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	83729242	83735151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83729306_83732624_83732762_83735091
ENSMUSG00000038379.16_83732633_83736869_1	chr9	+	280	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	11389	14464	11389	-14464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTAAAGAATGACTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	83732632	83736869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83732762_83735091_83735229_83736855
ENSMUSG00000038379.16_83732691_83736912_1	chr9	+	265	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	11447	14421	11447	-14421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGCCAGCTTGCCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	83732690	83736912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83732762_83735091_83735229_83736855
ENSMUSG00000038379.16_83732741_83736971_1	chr9	+	274	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	11497	14362	11497	-14362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTGCAGGTTCGATGC	NA	NA	NA	NA	NA	NA	NA	NA	83732740	83736971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83732762_83735091_83735229_83736855
ENSMUSG00000038379.16_83736889_83744306_1	chr9	+	283	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	15645	7027	15645	-7027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACGAGATAGCGTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	83736888	83744306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83736994_83739377_83739464_83744214
ENSMUSG00000038379.16_83739424_83744569_1	chr9	+	267	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	18180	6764	18180	-6764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAAATCCATCAATC	NA	NA	NA	NA	NA	NA	NA	NA	83739423	83744569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83739464_83744214_83744373_83744500
ENSMUSG00000038379.16_83744235_83745516_1	chr9	+	309	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	22991	5817	22991	-5817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCTGCTAACTTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	83744234	83745516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83744373_83744500_83744653_83745497
ENSMUSG00000038379.16_83744356_83745607_1	chr9	+	279	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	23112	5726	23112	-5726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAAGATTCTCAGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	83744355	83745607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83744373_83744500_83744653_83745497
ENSMUSG00000038379.16_83744607_83750139_1	chr9	+	296	4	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	23363	1194	23363	-1194	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACATGACTTATGGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	83744606	83750139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83744653_83745497_83745623_83747130_83747212_83750095
ENSMUSG00000038379.16_83745532_83750196_1	chr9	+	273	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	24288	1137	24288	-1137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACGCCATAATCAACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	83745531	83750196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_83745623_83747130_83747212_83750095
ENSMUSG00000038383.17_155120163_155187632_1	chr2	-	1471	11	ISM	ENSMUSG00000038383.17	ENSMUST00000077626.13	1636	12	11718	0	11712	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTTCTGATGACATGT	NA	NA	NA	NA	NA	NA	NA	NA	155187632	155120162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155120570_155134609_155134753_155139002_155139128_155140965_155141110_155143120_155143276_155156421_155156520_155170500_155170602_155173068_155173179_155177280_155177344_155178601_155178662_155187567
ENSMUSG00000038383.17_155120354_155199222_1	chr2	-	1317	12	FSM	ENSMUSG00000038383.17	ENSMUST00000077626.13	1636	12	128	191	122	-190	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAAGTCCAGGGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	155199222	155120353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_155120570_155134609_155134753_155139002_155139128_155140965_155141110_155143120_155143276_155156421_155156520_155170500_155170602_155173068_155173179_155177280_155177344_155178601_155178662_155187567_155187633_155199185
ENSMUSG00000038383.17_155120403_155199339_1	chr2	-	1385	12	FSM	ENSMUSG00000038383.17	ENSMUST00000077626.13	1636	12	11	240	5	-239	multi-exon	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCCCTCATCCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	155199339	155120402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_155120570_155134609_155134753_155139002_155139128_155140965_155141110_155143120_155143276_155156421_155156520_155170500_155170602_155173068_155173179_155177280_155177344_155178601_155178662_155187567_155187633_155199185
ENSMUSG00000038383.17_155120455_155199339_1	chr2	-	1333	12	FSM	ENSMUSG00000038383.17	ENSMUST00000077626.13	1636	12	11	292	5	-291	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGGCACAGCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	155199339	155120454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_155120570_155134609_155134753_155139002_155139128_155140965_155141110_155143120_155143276_155156421_155156520_155170500_155170602_155173068_155173179_155177280_155177344_155178601_155178662_155187567_155187633_155199185
ENSMUSG00000038390.12_124835407_124839087_1	chr6	-	1421	4	ISM	ENSMUSG00000038390.12	ENST00000428545.6	1580	5	1707	0	1707	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGTTCAGCGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	124839087	124835406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124836184_124836454_124836613_124836985_124837176_124838791
ENSMUSG00000038390.12_124835539_124840735_1	chr6	-	1389	5	FSM	ENSMUSG00000038390.12	ENST00000428545.6	1580	5	59	132	59	-128	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGATGGGGGGGGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	124840735	124835538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_124836184_124836454_124836613_124836985_124837176_124838791_124839086_124840633
ENSMUSG00000038393.15_96465652_96467906_1	chr3	+	1155	8	FSM	ENSMUSG00000038393.15	ENSMUST00000074519.13	2827	8	379	1293	376	-1267	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTTCAGAGACTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	96465651	96467906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_96465802_96466204_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ENSMUSG00000038393.15_96467370_96468692_1	chr3	+	1091	3	ISM	ENSMUSG00000038393.15	ENSMUST00000049093.8	2795	8	2094	481	2094	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGATCCACCTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	96467369	96468692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96467411_96467523_96467676_96467794
ENSMUSG00000038398.9_13835615_13848232_1	chr8	+	1096	9	FSM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	0	961	0	-139	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAACTTCTAGATGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	13835614	13848232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_13835885_13836146_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
ENSMUSG00000038398.9_13836145_13848371_1	chr8	+	967	8	ISM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	530	822	530	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGTGTCCCCATGGACG	NA	NA	NA	NA	NA	NA	NA	NA	13836144	13848371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
ENSMUSG00000038398.9_13837361_13848493_1	chr8	+	984	7	ISM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	1746	700	-5	122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTGCTCTGCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	13837360	13848493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
ENSMUSG00000038398.9_13837392_13848579_1	chr8	+	1039	7	ISM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	1777	614	26	208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTAGAGTTGTACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	13837391	13848579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
ENSMUSG00000038398.9_13837413_13845641_1	chr8	+	284	4	ISM	ENSMUSG00000038398.9	ENST00000457924.2	758	6	47	2730	47	-2730	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCGGGAAGAAGAGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	13837412	13845641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13837472_13842099_13842211_13845439_13845496_13845583
ENSMUSG00000038398.9_13837442_13848636_1	chr8	+	1046	7	ISM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	1827	557	76	265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTCTAGAGTGTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	13837441	13848636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
ENSMUSG00000038398.9_13841954_13848748_1	chr8	+	1056	6	ISM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	6339	445	4588	377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTCGAGACAGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	13841953	13848748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
ENSMUSG00000038398.9_13845620_13848953_1	chr8	+	1031	3	ISM	ENSMUSG00000038398.9	ENST00000457924.2	758	6	8254	-582	8254	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATATTGTAAAATGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	13845619	13848953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13845740_13846458_13846593_13848176
ENSMUSG00000038398.9_13846457_13849193_1	chr8	+	1153	2	ISM	ENSMUSG00000038398.9	ENST00000457924.2	758	6	9091	-822	9091	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCATCTTGTGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	13846456	13849193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13846593_13848176
ENSMUSG00000038400.16_173068835_173076151_1	chr2	-	1405	3	ISM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	42175	2584	42175	-2584	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTCCCCCAGGGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	173076151	173068834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_173070137_173070368_173070420_173076099
ENSMUSG00000038400.16_173068874_173076219_1	chr2	-	1434	3	ISM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	42107	2623	42107	-2623	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGGTCTCAGAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	173076219	173068873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_173070137_173070368_173070420_173076099
ENSMUSG00000038400.16_173068949_173076254_1	chr2	-	1394	3	ISM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	42072	2698	42072	-2698	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGAGAGTGTGTTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	173076254	173068948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_173070137_173070368_173070420_173076099
ENSMUSG00000038400.16_173069235_173118162_1	chr2	-	1390	4	FSM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	164	2984	164	-2984	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCAATATTATATATATAA	NA	NA	NA	NA	NA	NA	NA	NA	173118162	173069234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_173070137_173070368_173070420_173076099_173076255_173117880
ENSMUSG00000038402.3_31809913_31815387_1	chr13	+	2250	2	FSM	ENSMUSG00000038402.3	ENSMUST00000042054.3	2363	2	114	-1	114	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTGTTCTAGGGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	31809912	31815387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_31811240_31814464
ENSMUSG00000038403.11_96432488_96436134_1	chr3	+	914	2	FSM	ENSMUSG00000038403.11	ENST00000475797.1	1285	2	-9	380	0	-380	multi-exon	FALSE	canonical	NA	NA	NA	NA	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGCTGAAATGACCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	96432487	96436134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_96432647_96435379
ENSMUSG00000038403.11_96432488_96436239_1	chr3	+	1019	2	FSM	ENSMUSG00000038403.11	ENST00000475797.1	1285	2	-9	275	0	-275	multi-exon	FALSE	canonical	NA	NA	NA	NA	1762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATGAAATTCCACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	96432487	96436239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_96432647_96435379
ENSMUSG00000038403.11_96432632_96435496_1	chr3	+	169	3	FSM	ENSMUSG00000038403.11	ENST00000497365.5	1322	3	135	1018	135	-1018	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCTCGAGTTTGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	96432631	96435496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_96432647_96434350_96434388_96435379
ENSMUSG00000038412.9_121677629_121681675_1	chr9	-	1381	3	ISM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	5753	0	4926	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGATGTCTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	121681675	121677628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_121678756_121679253_121679389_121681556
ENSMUSG00000038412.9_121677629_121686601_1	chr9	-	1405	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	827	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGATGTCTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	121686601	121677628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
ENSMUSG00000038412.9_121677836_121686737_1	chr9	-	1324	4	NNC	ENSMUSG00000038412.9	novel	2232	4	NA	NA	-59	-207	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCAGTGTGTCTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	121686737	121677835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_121678756_121679253_121679389_121681556_121681662_121686573
ENSMUSG00000038416.16_13812904_13817587_1	chr8	+	463	5	ISM	ENSMUSG00000038416.16	ENST00000252458.6	2014	17	5100	14345	5100	-14345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAATACAATTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	13812903	13817587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537
ENSMUSG00000038416.16_13813867_13819422_1	chr8	+	429	6	ISM	ENSMUSG00000038416.16	ENST00000252458.6	2014	17	6063	12510	6063	-12510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGGCATTCCTTCGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	13813866	13819422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376
ENSMUSG00000038416.16_13814652_13823387_1	chr8	+	428	6	ISM	ENSMUSG00000038416.16	ENST00000252458.6	2014	17	6848	8545	6848	-8545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATTGGAAATGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	13814651	13823387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13823340
ENSMUSG00000038416.16_13816418_13825770_1	chr8	+	457	6	ISM	ENSMUSG00000038416.16	ENST00000252458.6	2014	17	8614	6162	8614	-6162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAAGTAGAGCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	13816417	13825770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13823340_13823405_13825707
ENSMUSG00000038416.16_13819460_13831420_1	chr8	+	445	6	ISM	ENSMUSG00000038416.16	ENST00000252458.6	2014	17	11656	512	11656	-512	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATGAAAACACTAAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	13819459	13831420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13819503_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ENSMUSG00000038416.16_13827545_13831707_1	chr8	+	490	3	ISM	ENSMUSG00000038416.16	ENST00000252458.6	2014	17	19741	225	19741	-225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACGTCCTAAGAATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	13827544	13831707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13827608_13829227_13829319_13831371
ENSMUSG00000038417.5_41064523_41096980_1	chr10	-	259	2	ISM	ENSMUSG00000038417.5	ENST00000415980.2	1547	13	82102	-1	82102	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAGACGGCCTCGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	41096980	41064522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_41064696_41096894
ENSMUSG00000038417.5_41064524_41132533_1	chr10	-	1447	12	ISM	ENSMUSG00000038417.5	ENST00000415980.2	1547	13	46549	0	46549	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGAGACGGCCTCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	41132533	41064523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416
ENSMUSG00000038417.5_41096955_41104258_1	chr10	-	266	3	ISM	ENSMUSG00000038417.5	ENST00000415980.2	1547	13	74824	32431	74824	7048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAGGACCGAGGTAACC	NA	NA	NA	NA	NA	NA	NA	NA	41104258	41096954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_41096982_41102917_41103001_41104102
ENSMUSG00000038417.5_41104103_41106087_1	chr10	-	281	2	ISM	ENSMUSG00000038417.5	ENST00000675714.1	2510	20	72995	100	72995	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCGGGAGCAGGGAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	41106087	41104102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_41104299_41106002
ENSMUSG00000038417.5_41104210_41108202_1	chr10	-	273	3	ISM	ENSMUSG00000038417.5	ENST00000675714.1	2510	20	70880	207	70880	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGGATGACTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	41108202	41104209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_41104299_41106002_41106087_41108102
ENSMUSG00000038417.5_41116565_41129726_1	chr10	-	333	3	ISM	ENSMUSG00000038417.5	ENST00000675714.1	2510	20	49356	12562	49356	11146	internal_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCCCACAGACTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	41129726	41116564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_41116640_41127712_41127880_41129635
ENSMUSG00000038417.5_41127711_41161630_1	chr10	-	1617	14	NNC	ENSMUSG00000038417.5	novel	1786	15	NA	NA	17452	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3960	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACCAGCAGTGGGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	41161630	41127710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134140_41139059_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161289_41161410_41161596
ENSMUSG00000038417.5_41127711_41161695_1	chr10	-	1682	14	NNC	ENSMUSG00000038417.5	novel	1786	15	NA	NA	17387	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4869	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACCAGCAGTGGGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	41161695	41127710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134136_41139059_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596
ENSMUSG00000038417.5_41127775_41179045_1	chr10	-	1685	15	FSM	ENSMUSG00000038417.5	ENST00000675681.1	1786	15	37	64	37	-64	multi-exon	FALSE	canonical	NA	NA	NA	NA	5112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCAGCACTCCAAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	41179045	41127774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134140_41139059_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ENSMUSG00000038417.5_41127775_41179045_2	chr10	-	1683	15	NNC	ENSMUSG00000038417.5	novel	1786	15	NA	NA	37	-64	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCAGCACTCCAAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	41179045	41127774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134136_41139057_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ENSMUSG00000038417.5_41127775_41179045_3	chr10	-	1556	14	FSM	ENSMUSG00000038417.5	ENST00000675973.1	1657	14	37	64	37	-64	multi-exon	FALSE	canonical	NA	NA	NA	NA	3535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCAGCACTCCAAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	41179045	41127774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134140_41139059_41139163_41139880_41140044_41141381_41141483_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ENSMUSG00000038417.5_41127775_41179045_4	chr10	-	1685	15	ISM	ENSMUSG00000038417.5	ENSMUST00000043814.5	3282	23	211	63607	37	-64	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCAGCACTCCAAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	41179045	41127774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ENSMUSG00000038417.5_41134058_41139953_1	chr10	-	258	3	ISM	ENSMUSG00000038417.5	ENST00000675681.1	1786	15	39129	6347	39129	5811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACCATTGTCTACATCCC	NA	NA	NA	NA	NA	NA	NA	NA	41139953	41134057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_41134140_41139059_41139163_41139880
ENSMUSG00000038417.5_41139869_41179045_1	chr10	-	818	7	FSM	ENSMUSG00000038417.5	ENST00000368941.2	855	7	37	0	37	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCGGGAGTTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	41179045	41139868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_41140044_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ENSMUSG00000038417.5_41139958_41143758_1	chr10	-	263	3	ISM	ENSMUSG00000038417.5	ENST00000675681.1	1786	15	35324	12247	35324	-89	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACAAGTTAGAGGATCCG	NA	NA	NA	NA	NA	NA	NA	NA	41143758	41139957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_41140044_41141381_41141483_41143682
ENSMUSG00000038418.8_34994529_34996336_1	chr18	+	1130	2	FSM	ENSMUSG00000038418.8	ENSMUST00000064795.6	4484	2	1653	1701	269	-1673	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTCAGTCGTAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	34994528	34996336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_34994840_34995517
ENSMUSG00000038421.14_170748494_170755167_1	chr1	-	331	2	FSM	ENSMUSG00000038421.14	ENST00000367957.7	425	2	0	94	0	-94	multi-exon	FALSE	canonical	NA	NA	NA	NA	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAACACTCTGGCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	170755167	170748493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_170748688_170755030
ENSMUSG00000038421.14_170748609_170755103_1	chr1	-	625	4	FSM	ENSMUSG00000038421.14	ENST00000367959.6	937	4	103	209	49	-209	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAAGCTGGCCCTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	170755103	170748608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_170748688_170749086_170749354_170749790_170749974_170755007
ENSMUSG00000038421.14_170748676_170755138_1	chr1	-	593	4	FSM	ENSMUSG00000038421.14	ENST00000367959.6	937	4	68	276	14	-276	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGTTCTCAAAGCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	170755138	170748675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_170748688_170749086_170749354_170749790_170749974_170755007
ENSMUSG00000038425.19_70642449_70659652_1	chr18	-	1147	7	ISM	ENSMUSG00000038425.19	ENST00000406285.7	1954	9	3710	437	3557	-437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCGGGTATCAGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	70659652	70642448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70658446_70658600_70659627
ENSMUSG00000038425.19_70642514_70659699_1	chr18	-	1129	7	ISM	ENSMUSG00000038425.19	ENST00000406285.7	1954	9	3663	502	3510	-502	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTCTTTTCTACAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	70659699	70642513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70658446_70658600_70659627
ENSMUSG00000038425.19_70642645_70661791_1	chr18	-	1110	8	ISM	ENSMUSG00000038425.19	ENST00000406285.7	1954	9	1571	633	1418	-633	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTTGATCAAGAAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	70661791	70642644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70658446_70658600_70659627_70659793_70661772
ENSMUSG00000038425.19_70642705_70661857_1	chr18	-	1116	8	ISM	ENSMUSG00000038425.19	ENST00000406285.7	1954	9	1505	693	1352	-693	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACCTGTTTTCCTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	70661857	70642704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70658446_70658600_70659627_70659793_70661772
ENSMUSG00000038425.19_70649857_70663339_1	chr18	-	1135	8	ISM	ENSMUSG00000038425.19	ENST00000406285.7	1954	9	23	7845	23	-7845	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGCTGCACTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	70663339	70649856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70658446_70658600_70659627_70659793_70661772_70661899_70663258
ENSMUSG00000038429.11_124792001_124794346_1	chr6	-	773	3	ISM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	12052	0	12052	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGTACGGGGGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	124794346	124792000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124792623_124793946_124794032_124794280
ENSMUSG00000038429.11_124792001_124798109_1	chr6	-	1831	10	ISM	ENSMUSG00000038429.11	ENSMUST00000047510.10	3213	20	8338	19	8289	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGTACGGGGGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	124798109	124792000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795437_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039
ENSMUSG00000038429.11_124792226_124798346_1	chr6	-	1725	11	ISM	ENSMUSG00000038429.11	ENSMUST00000047510.10	3213	20	8101	244	8052	-225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGGCGGGCTCTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	124798346	124792225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795437_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283
ENSMUSG00000038429.11_124792383_124799646_1	chr6	-	1823	13	ISM	ENSMUSG00000038429.11	ENSMUST00000047510.10	3213	20	6801	401	6752	-382	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAACAAAGAGGAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	124799646	124792382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795437_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488
ENSMUSG00000038429.11_124794209_124801279_1	chr6	-	1886	13	ISM	ENSMUSG00000038429.11	ENSMUST00000047510.10	3213	20	5168	2227	5119	-2208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACTCTGAGGGGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	124801279	124794208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124794435_124794629_124794776_124794850_124794995_124795437_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094
ENSMUSG00000038429.11_124794372_124797081_1	chr6	-	697	6	ISM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	9317	2371	9317	-2371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTATGGACATCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	124797081	124794371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949
ENSMUSG00000038429.11_124794630_124801664_1	chr6	-	1806	13	ISM	ENSMUSG00000038429.11	ENSMUST00000047510.10	3213	20	4783	2648	4734	-2629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGCGCTGCCCTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	124801664	124794629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124794776_124794850_124794995_124795437_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518
ENSMUSG00000038429.11_124794637_124797401_1	chr6	-	697	6	ISM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	8997	2636	8997	-2636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACGGTATGCGCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	124797401	124794636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374
ENSMUSG00000038429.11_124794692_124797460_1	chr6	-	701	6	ISM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	8938	2691	8938	-2691	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCACCATAGTCTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	124797460	124794691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374
ENSMUSG00000038429.11_124794741_124797528_1	chr6	-	720	6	ISM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	8870	2740	8870	-2740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGGCTCCACAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	124797528	124794740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374
ENSMUSG00000038429.11_124794876_124801912_1	chr6	-	1733	13	ISM	ENSMUSG00000038429.11	ENSMUST00000047510.10	3213	20	4535	2894	4486	-2875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGTCACACATGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	124801912	124794875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124794995_124795437_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814
ENSMUSG00000038429.11_124799667_124803331_1	chr6	-	713	7	ISM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	3067	7666	3067	-7666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCTGGAGATAGACATG	NA	NA	NA	NA	NA	NA	NA	NA	124803331	124799666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261
ENSMUSG00000038429.11_124801099_124806371_1	chr6	-	778	6	ISM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	27	9098	27	-9098	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTACCCGCCTGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	124806371	124801098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ENSMUSG00000038446.9_40707617_40725837_1	chr10	-	2668	10	ISM	ENSMUSG00000038446.9	ENSMUST00000044166.9	3534	15	33470	0	33470	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGAGTTCATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	40725837	40707616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717812_40719037_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740
ENSMUSG00000038446.9_40707818_40728535_1	chr10	-	2650	12	ISM	ENSMUSG00000038446.9	ENSMUST00000044166.9	3534	15	30772	201	30772	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTTTAACAAATGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	40728535	40707817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717812_40719037_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492
ENSMUSG00000038446.9_40707908_40728548_1	chr10	-	2573	12	ISM	ENSMUSG00000038446.9	ENSMUST00000044166.9	3534	15	30759	291	30759	-291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTAGCCATTGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	40728548	40707907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717812_40719037_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492
ENSMUSG00000038446.9_40708055_40743906_1	chr10	-	2671	14	ISM	ENSMUSG00000038446.9	ENSMUST00000044166.9	3534	15	15401	438	15401	-438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTAAAACTTTTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	40743906	40708054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717812_40719037_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40743819
ENSMUSG00000038446.9_40708393_40759136_1	chr10	-	2587	15	FSM	ENSMUSG00000038446.9	ENSMUST00000044166.9	3534	15	171	776	171	-776	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAATGTAAAATTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	40759136	40708392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717812_40719037_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40743819_40743907_40758882
ENSMUSG00000038451.14_124785624_124786901_1	chr6	+	831	2	ISM	ENSMUSG00000038451.14	ENSMUST00000047760.10	1213	3	0	681	0	-681	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGCATCCGCTACATGGG	NA	NA	NA	NA	NA	NA	NA	NA	124785623	124786901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124785743_124786189
ENSMUSG00000038451.14_124785848_124787299_1	chr6	+	957	3	FSM	ENSMUSG00000038451.14	ENSMUST00000052727.5	1219	3	-21	283	-21	-283	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTCAAATATCCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	124785847	124787299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_124785994_124786189_124786933_124787231
ENSMUSG00000038451.14_124786453_124787582_1	chr6	+	831	2	ISM	ENSMUSG00000038451.14	ENSMUST00000052727.5	1219	3	584	0	192	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTATTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	124786452	124787582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124786933_124787231
ENSMUSG00000038456.10_39460032_39472156_1	chr6	-	599	7	ISM	ENSMUSG00000038456.10	ENST00000492720.5	2541	13	32342	2919	32342	-2919	internal_fragment	TRUE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGGAGCGTCATGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	39472156	39460031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110
ENSMUSG00000038456.10_39462517_39473965_1	chr6	-	625	7	ISM	ENSMUSG00000038456.10	ENST00000492720.5	2541	13	30533	5404	30533	-5404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCTTCAGCCTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	39473965	39462516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907
ENSMUSG00000038456.10_39465701_39474108_1	chr6	-	644	5	ISM	ENSMUSG00000038456.10	ENST00000492720.5	2541	13	30390	8588	30390	-8588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCGGTTCCAACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	39474108	39465700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907
ENSMUSG00000038456.10_39465746_39483667_1	chr6	-	632	6	ISM	ENSMUSG00000038456.10	ENST00000492720.5	2541	13	20831	8633	20831	-8633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCCGATGCTAAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	39483667	39465745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634
ENSMUSG00000038456.10_39469933_39483756_1	chr6	-	656	5	ISM	ENSMUSG00000038456.10	ENST00000492720.5	2541	13	20742	12820	20742	-12820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGGACACAGGTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	39483756	39469932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634
ENSMUSG00000038456.10_39470071_39485240_1	chr6	-	583	6	ISM	ENSMUSG00000038456.10	ENST00000492720.5	2541	13	19258	12958	19258	-12958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATACTCATCGCTTGACCG	NA	NA	NA	NA	NA	NA	NA	NA	39485240	39470070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175
ENSMUSG00000038456.10_39472153_39499658_1	chr6	-	572	5	ISM	ENSMUSG00000038456.10	ENST00000492720.5	2541	13	4840	15040	4840	-15040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGGCTATCCCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	39499658	39472152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589
ENSMUSG00000038456.10_39473942_39499759_1	chr6	-	587	4	ISM	ENSMUSG00000038456.10	ENST00000492720.5	2541	13	4739	16829	4739	-16829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAATGGCAGGAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	39499759	39473941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39474109_39483634_39483757_39485175_39485304_39499589
ENSMUSG00000038456.10_39483635_39499965_1	chr6	-	626	3	ISM	ENSMUSG00000038456.10	ENST00000492720.5	2541	13	4533	26522	4533	-26522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTAGCTTGGGCATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	39499965	39483634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39483757_39485175_39485304_39499589
ENSMUSG00000038456.10_39500150_39504473_1	chr6	-	602	2	ISM	ENSMUSG00000038456.10	ENST00000492720.5	2541	13	25	43037	25	-43037	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCAGCACCGAGGTCG	NA	NA	NA	NA	NA	NA	NA	NA	39504473	39500149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39500694_39504415
ENSMUSG00000038459.11_83758564_83800694_1	chr7	-	1831	3	FSM	ENSMUSG00000038459.11	ENSMUST00000117085.2	2238	3	407	0	407	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTGGGCTTATGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	83800694	83758563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_83760010_83763458_83763639_83800489
ENSMUSG00000038459.11_83758791_83800878_1	chr7	-	1788	3	FSM	ENSMUSG00000038459.11	ENSMUST00000117085.2	2238	3	223	227	223	-227	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTACACTAACTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	83800878	83758790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_83760010_83763458_83763639_83800489
ENSMUSG00000038462.4_30724677_30729205_1	chr13	-	837	2	FSM	ENSMUSG00000038462.4	ENSMUST00000042834.4	1363	2	140	386	140	-386	multi-exon	FALSE	canonical	NA	NA	NA	NA	1569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCCCCTCAGAAGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	30729205	30724676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_30725325_30729016
ENSMUSG00000038462.4_30724822_30729205_1	chr13	-	692	2	FSM	ENSMUSG00000038462.4	ENSMUST00000042834.4	1363	2	140	531	140	-531	multi-exon	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCACACTATGACGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	30729205	30724821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_30725325_30729016
ENSMUSG00000038463.9_170472101_170494220_1	chr1	+	1193	5	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	0	16138	0	-16138	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCTGCAGCGATGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	170472100	170494220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_170472665_170475250_170475515_170477304_170477413_170489927_170490105_170494140
ENSMUSG00000038463.9_170472101_170494302_1	chr1	+	1275	5	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	0	16056	0	-16056	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGGGAATCACCTACTA	NA	NA	NA	NA	NA	NA	NA	NA	170472100	170494302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_170472665_170475250_170475515_170477304_170477413_170489927_170490105_170494140
ENSMUSG00000038463.9_170472273_170494333_1	chr1	+	1134	5	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	172	16025	172	-16025	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGAGGAGGAAAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	170472272	170494333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_170472665_170475250_170475515_170477304_170477413_170489927_170490105_170494140
ENSMUSG00000038463.9_170472430_170496447_1	chr1	+	1138	6	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	329	13911	329	-13911	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGCGAGCATTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	170472429	170496447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_170472665_170475250_170475515_170477304_170477413_170489927_170490105_170494140_170494367_170496319
ENSMUSG00000038463.9_170472505_170496524_1	chr1	+	1140	6	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	404	13834	404	-13834	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTCCTCAGGCCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	170472504	170496524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_170472665_170475250_170475515_170477304_170477413_170489927_170490105_170494140_170494367_170496319
ENSMUSG00000038463.9_170472559_170496600_1	chr1	+	1162	6	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	458	13758	458	-13758	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTTCTACCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	170472558	170496600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_170472665_170475250_170475515_170477304_170477413_170489927_170490105_170494140_170494367_170496319
ENSMUSG00000038463.9_170475307_170496742_1	chr1	+	1142	5	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	3206	13616	3206	-13616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGGAAGAGGGGACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	170475306	170496742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_170475515_170477304_170477413_170489927_170490105_170494140_170494367_170496319
ENSMUSG00000038463.9_170475457_170508657_1	chr1	+	1134	6	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	3356	1701	3356	-1701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGACGGAATGAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	170475456	170508657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_170475515_170477304_170477413_170489927_170490105_170494140_170494367_170496319_170496833_170508605
ENSMUSG00000038463.9_170477303_170508782_1	chr1	+	1203	5	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	5202	1576	5202	-1576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGAGTCAGCTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	170477302	170508782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_170477413_170489927_170490105_170494140_170494367_170496319_170496833_170508605
ENSMUSG00000038463.9_170489926_170509381_1	chr1	+	1184	5	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	17825	977	17825	-977	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACCCGAAACATCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	170489925	170509381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_170490105_170494140_170494367_170496319_170496833_170508605_170508783_170509292
ENSMUSG00000038463.9_170494171_170509556_1	chr1	+	1150	4	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	22070	802	22070	-802	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTTCAACCAGGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	170494170	170509556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_170494367_170496319_170496833_170508605_170508783_170509292
ENSMUSG00000038463.9_170494250_170509702_1	chr1	+	1217	4	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	22149	656	22149	-656	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTATAACCAGAGGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	170494249	170509702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_170494367_170496319_170496833_170508605_170508783_170509292
ENSMUSG00000038463.9_170496593_170509989_1	chr1	+	1114	3	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	24492	369	24492	-369	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGTTTTAAAATATATT	NA	NA	NA	NA	NA	NA	NA	NA	170496592	170509989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_170496833_170508605_170508783_170509292
ENSMUSG00000038463.9_170496718_170510190_1	chr1	+	1190	3	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	24617	168	24617	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCAAGGGCTGGAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	170496717	170510190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_170496833_170508605_170508783_170509292
ENSMUSG00000038463.9_170508603_170510358_1	chr1	+	1246	2	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	36502	0	36502	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGCTCATTTTCGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	170508602	170510358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_170508783_170509292
ENSMUSG00000038482.12_13388751_13427336_1	chr8	+	1399	12	FSM	ENSMUSG00000038482.12	ENSMUST00000209885.2	2511	12	0	1112	0	-366	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACGTATAGAGGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	13388750	13427336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUSG00000038482.12_13415170_13427548_1	chr8	+	1332	9	ISM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	25496	154	25496	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTTTTTTCCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	13415169	13427548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUSG00000038482.12_13420480_13427778_1	chr8	+	1415	7	ISM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	30806	-76	30806	76	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGTTTAACAAGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	13420479	13427778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUSG00000038482.12_13420919_13427924_1	chr8	+	1354	6	ISM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	31245	-222	31245	222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAGAAGTTTACTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	13420918	13427924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUSG00000038482.12_13421365_13428036_1	chr8	+	1349	5	ISM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	31691	-334	31691	334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGTTTACATACTTATA	NA	NA	NA	NA	NA	NA	NA	NA	13421364	13428036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUSG00000038482.12_13421399_13428132_1	chr8	+	1411	5	ISM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	31725	-430	31725	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTGAAATTAAACATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	13421398	13428132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUSG00000038482.12_13422476_13428171_1	chr8	+	1418	4	ISM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	32802	-469	32802	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCAAAATTTGTCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	13422475	13428171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUSG00000038482.12_13422556_13428195_1	chr8	+	1362	4	ISM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	32882	-493	32882	-247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTTCTTTTTTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	13422555	13428195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUSG00000038482.12_13423025_13428341_1	chr8	+	1357	3	ISM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	33351	-639	33351	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTGTAATATTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	13423024	13428341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13423103_13423844_13423924_13427141
ENSMUSG00000038482.12_13423842_13428448_1	chr8	+	1389	2	ISM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	34168	-746	34168	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	NA	NA	NA	NA	NA	NA	NA	NA	13423841	13428448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13423924_13427141
ENSMUSG00000038497.8_13338238_13344920_1	chr8	+	920	4	ISM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	27	28004	27	-26590	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGGTGGAGGACGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	13338237	13344920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845
ENSMUSG00000038497.8_13341755_13348232_1	chr8	+	938	5	ISM	ENSMUSG00000038497.8	ENST00000375391.5	1777	7	33	23278	33	-23278	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGGAGAATTTGGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	13341754	13348232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212
ENSMUSG00000038497.8_13341812_13348280_1	chr8	+	929	5	ISM	ENSMUSG00000038497.8	ENST00000375391.5	1777	7	90	23230	90	-23230	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTCTCCAGAGAAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	13341811	13348280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212
ENSMUSG00000038497.8_13341923_13353820_1	chr8	+	936	6	ISM	ENSMUSG00000038497.8	ENST00000375391.5	1777	7	201	17690	201	-17690	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGAGTGTCTTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	13341922	13353820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727
ENSMUSG00000038497.8_13342028_13358388_1	chr8	+	968	7	ISM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	3817	14536	306	-13122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGACGTGCAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	13342027	13358388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345
ENSMUSG00000038497.8_13342096_13358421_1	chr8	+	933	7	ISM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	3885	14503	374	-13089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCATGCCAACTCTCATAC	NA	NA	NA	NA	NA	NA	NA	NA	13342095	13358421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345
ENSMUSG00000038497.8_13342748_13360216_1	chr8	+	936	7	ISM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	4537	12708	1026	-11294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTCTTGTCATGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	13342747	13360216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360144
ENSMUSG00000038497.8_13342799_13360267_1	chr8	+	936	7	ISM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	4588	12657	1077	-11243	internal_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCTGGAGAGCAAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	13342798	13360267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360144
ENSMUSG00000038497.8_13342850_13360317_1	chr8	+	935	7	ISM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	4639	12607	1128	-11193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCACCTTCCTGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	13342849	13360317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360144
ENSMUSG00000038497.8_13344934_13363909_1	chr8	+	934	7	ISM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	6723	9015	3212	-7601	internal_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCTATCCGTGACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	13344933	13363909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360144_13360341_13363805
ENSMUSG00000038497.8_13345004_13368880_1	chr8	+	949	8	ISM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	6793	4044	3282	-2630	internal_fragment	TRUE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGTGCTGGTGTTCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	13345003	13368880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360144_13360341_13363805_13363957_13368842
ENSMUSG00000038497.8_13345978_13369839_1	chr8	+	1036	8	ISM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	7767	3085	4256	-1671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCACAGGTCAGCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	13345977	13369839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762
ENSMUSG00000038497.8_13348263_13370788_1	chr8	+	956	8	ISM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	10052	2136	6541	-722	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCAGCCTCTTACTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	13348262	13370788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13348306_13353727_13353915_13358345_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
ENSMUSG00000038497.8_13353726_13370906_1	chr8	+	1033	7	ISM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	15515	2018	12004	-604	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTCGGGGGTTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	13353725	13370906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13353915_13358345_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
ENSMUSG00000038497.8_13358347_13371045_1	chr8	+	982	6	ISM	ENSMUSG00000038497.8	ENST00000434316.7	2676	12	16625	465	16625	-465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATTTTCCAGAGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	13358346	13371045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
ENSMUSG00000038497.8_13360215_13371177_1	chr8	+	924	5	ISM	ENSMUSG00000038497.8	ENST00000434316.7	2676	12	18493	333	18493	-333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTACCAGCTTATGATTT	NA	NA	NA	NA	NA	NA	NA	NA	13360214	13371177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
ENSMUSG00000038497.8_13363805_13371396_1	chr8	+	1018	4	ISM	ENSMUSG00000038497.8	ENST00000434316.7	2676	12	22083	114	22083	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTAGTTTTAATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	13363804	13371396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13363957_13368842_13368923_13369762_13369913_13370760
ENSMUSG00000038497.8_13368836_13371514_1	chr8	+	991	3	ISM	ENSMUSG00000038497.8	ENST00000434316.7	2676	12	27114	-4	27114	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTACTTATTTTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	13368835	13371514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_13368923_13369762_13369913_13370760
ENSMUSG00000038500.16_36283746_36290068_1	chr17	-	1291	3	FSM	ENSMUSG00000038500.16	ENST00000376557.3	1718	3	116	311	116	-311	multi-exon	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTCCTGCCTGGCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	36290068	36283745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_36284696_36285414_36285706_36290018
ENSMUSG00000038500.16_36283760_36289325_1	chr17	-	1280	3	FSM	ENSMUSG00000038500.16	ENSMUST00000173585.2	770	3	126	-636	126	-325	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGCCTCCCCAAACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	36289325	36283759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_36284696_36285414_36285706_36289272
ENSMUSG00000038500.16_36283788_36290191_1	chr17	-	1372	3	FSM	ENSMUSG00000038500.16	ENST00000376557.3	1718	3	-7	353	-7	-353	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCAGTGGTGTCTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	36290191	36283787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_36284696_36285414_36285706_36290018
ENSMUSG00000038500.16_36283861_36290191_1	chr17	-	1299	3	FSM	ENSMUSG00000038500.16	ENST00000376557.3	1718	3	-7	426	-7	-426	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGACGTGAGACTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	36290191	36283860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_36284696_36285414_36285706_36290018
ENSMUSG00000038500.16_36284497_36290750_1	chr17	-	1285	4	FSM	ENSMUSG00000038500.16	ENSMUST00000055454.14	2727	4	378	1064	-50	-101	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACCTTCAAGCACTGAC	NA	NA	NA	NA	NA	NA	NA	NA	36290750	36284496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_36284696_36285414_36285706_36289272_36289336_36290018
ENSMUSG00000038500.16_36285415_36290938_1	chr17	-	1274	3	ISM	ENSMUSG00000038500.16	ENSMUST00000055454.14	2727	4	190	1982	190	-1019	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCCAGGCCCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	36290938	36285414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36285706_36289272_36289336_36290018
ENSMUSG00000038500.16_36285462_36290998_1	chr17	-	1287	3	ISM	ENSMUSG00000038500.16	ENSMUST00000055454.14	2727	4	130	2029	130	-1066	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAAGAATACCTACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	36290998	36285461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36285706_36289272_36289336_36290018
ENSMUSG00000038500.16_36285515_36291128_1	chr17	-	1364	3	ISM	ENSMUSG00000038500.16	ENSMUST00000055454.14	2727	4	0	2082	0	-1119	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCTTTTACAAAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	36291128	36285514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36285706_36289272_36289336_36290018
ENSMUSG00000038502.18_44512493_44514933_1	chr7	-	939	7	ISM	ENSMUSG00000038502.18	ENSMUST00000046575.17	1883	12	4279	1	4121	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	44514933	44512492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895
ENSMUSG00000038502.18_44512493_44515051_1	chr7	-	1057	7	ISM	ENSMUSG00000038502.18	ENSMUST00000046575.17	1883	12	4161	1	4003	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	44515051	44512492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895
ENSMUSG00000038502.18_44512493_44516341_1	chr7	-	1165	8	ISM	ENSMUSG00000038502.18	ENSMUST00000046575.17	1883	12	2871	1	2713	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	44516341	44512492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233
ENSMUSG00000038502.18_44512493_44518830_1	chr7	-	1318	13	FSM	ENSMUSG00000038502.18	ENST00000599732.5	1539	13	224	-3	224	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	44518830	44512492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44512614_44512795_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ENSMUSG00000038502.18_44512493_44518830_2	chr7	-	1316	13	NNC	ENSMUSG00000038502.18	novel	1539	13	NA	NA	224	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	44518830	44512492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ENSMUSG00000038502.18_44512493_44518830_3	chr7	-	1323	13	NNC	ENSMUSG00000038502.18	novel	1539	13	NA	NA	224	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	44518830	44512492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44512614_44512790_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ENSMUSG00000038502.18_44512654_44516513_1	chr7	-	1034	9	ISM	ENSMUSG00000038502.18	ENST00000599732.5	1539	13	2541	158	2541	-156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAGTAGAAGCCACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	44516513	44512653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483
ENSMUSG00000038502.18_44512796_44519010_1	chr7	-	1377	12	FSM	ENSMUSG00000038502.18	ENSMUST00000046575.17	1883	12	202	304	44	-298	multi-exon	FALSE	canonical	NA	NA	NA	NA	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTGTCCGTGGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	44519010	44512795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ENSMUSG00000038502.18_44514036_44519010_1	chr7	-	997	9	NNC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	44	-1538	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGGTCAGGGGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	44519010	44514035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44514094_44514185_44514260_44514336_44514427_44514895_44515048_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ENSMUSG00000038502.18_44514221_44519212_1	chr7	-	1106	8	NNC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	0	-1723	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCCACGTCTATGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	44519212	44514220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44514260_44514336_44514427_44514895_44515048_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ENSMUSG00000038503.16_83541470_83549501_1	chr7	+	2991	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	262	1239	262	-1239	multi-exon	FALSE	canonical	NA	NA	NA	NA	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCACTTGTACCCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	83541469	83549501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_83541684_83544737_83544971_83546957
ENSMUSG00000038503.16_83541470_83549634_1	chr7	+	3124	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	262	1106	262	-1106	multi-exon	FALSE	canonical	NA	NA	NA	NA	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGATAGCCTCAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	83541469	83549634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_83541684_83544737_83544971_83546957
ENSMUSG00000038503.16_83544736_83549872_1	chr7	+	3150	2	ISM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	3528	868	0	-868	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCAGGGGCATCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	83544735	83549872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_83544971_83546957
ENSMUSG00000038506.14_13305963_13331014_1	chr8	-	2600	6	ISM	ENSMUSG00000038506.14	ENSMUST00000045366.10	2748	7	6827	-1	6819	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	13331014	13305962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_13307977_13308946_13309044_13311384_13311468_13321589_13321721_13328516_13328686_13330908
ENSMUSG00000038506.14_13305963_13331014_2	chr8	-	2420	4	ISM	ENSMUSG00000038506.14	ENSMUST00000110840.8	2853	5	7111	0	6819	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	13331014	13305962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_13307977_13321589_13321721_13328516_13328686_13330908
ENSMUSG00000038506.14_13306091_13331125_1	chr8	-	2583	6	ISM	ENSMUSG00000038506.14	ENSMUST00000045366.10	2748	7	6716	127	6708	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATACCAGTAATTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	13331125	13306090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_13307977_13308946_13309044_13311384_13311468_13321589_13321721_13328516_13328686_13330908
ENSMUSG00000038506.14_13306091_13337833_1	chr8	-	2433	5	FSM	ENSMUSG00000038506.14	ENSMUST00000110840.8	2853	5	292	128	0	-127	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATACCAGTAATTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	13337833	13306090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_13307977_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ENSMUSG00000038507.7_39064080_39067219_1	chr6	-	734	3	ISM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	28064	736	28064	-736	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGGGCTTTGTGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	39067219	39064079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39064575_39065911_39066064_39067132
ENSMUSG00000038507.7_39064394_39073567_1	chr6	-	735	6	ISM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	21716	1050	21716	-1050	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCCGACCCAACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	39073567	39064393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39064575_39065911_39066064_39067132_39067264_39068238_39068315_39070561_39070659_39073469
ENSMUSG00000038507.7_39065950_39079533_1	chr6	-	797	7	ISM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	15750	2606	15750	-2606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGGTCTGTGGTCTGCACG	NA	NA	NA	NA	NA	NA	NA	NA	39079533	39065949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39066064_39067132_39067264_39068238_39068315_39070561_39070659_39073469_39073612_39077182_39077379_39079492
ENSMUSG00000038507.7_39073470_39088638_1	chr6	-	758	5	ISM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	6645	10126	6645	-10126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTCTTACTTGTAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	39088638	39073469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39073612_39077182_39077379_39079492_39079617_39082823_39082926_39088444
ENSMUSG00000038507.7_39088479_39095069_1	chr6	-	732	3	ISM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	214	25135	214	-25135	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTCTCCCGCAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	39095069	39088478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39088746_39091099_39091236_39094740
ENSMUSG00000038507.7_39088571_39095169_1	chr6	-	740	3	ISM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	114	25227	114	-25227	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTTAAGTTCTGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	39095169	39088570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39088746_39091099_39091236_39094740
ENSMUSG00000038508.8_71082556_71084277_1	chr8	-	564	2	FSM	ENSMUSG00000038508.8	ENSMUST00000003808.8	1545	2	468	513	468	-512	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGGGGCGCCGAAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	71084277	71082555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_71082825_71083982
ENSMUSG00000038510.13_40099423_40123023_1	chr10	-	1282	10	NNC	ENSMUSG00000038510.13	novel	1296	10	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATGTCACAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	40123023	40099422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109199_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
ENSMUSG00000038510.13_40099423_40123023_2	chr10	-	1281	10	NNC	ENSMUSG00000038510.13	novel	1296	10	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	797	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATGTCACAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	40123023	40099422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_40099911_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
ENSMUSG00000038510.13_40099423_40123023_3	chr10	-	1265	9	NNC	ENSMUSG00000038510.13	novel	1296	10	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATGTCACAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	40123023	40099422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40120564_40120714_40122948
ENSMUSG00000038510.13_40099423_40123023_4	chr10	-	1282	10	NNC	ENSMUSG00000038510.13	novel	1296	10	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATGTCACAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	40123023	40099422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122953
ENSMUSG00000038520.16_44489341_44491482_1	chr7	-	1667	3	ISM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	7017	5294	6828	5178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCGATGTGCTCCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	44491482	44489340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44490845_44490966_44491054_44491406
ENSMUSG00000038520.16_44489538_44492123_1	chr7	-	1688	5	ISM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	6376	5491	6187	4981	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCCCACAGCCGGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	44492123	44489537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044
ENSMUSG00000038520.16_44489727_44492498_1	chr7	-	1701	7	ISM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	6001	5680	5812	4792	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAACCCGGACTTGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	44492498	44489726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418
ENSMUSG00000038520.16_44490325_44494752_1	chr7	-	1702	12	ISM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	3747	6278	3558	4194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCACGGTGTAGTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	44494752	44490324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680
ENSMUSG00000038520.16_44490457_44495424_1	chr7	-	1736	13	ISM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	3075	6410	2886	4062	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGCTGGCTGGCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	44495424	44490456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298
ENSMUSG00000038520.16_44490665_44496277_1	chr7	-	1703	14	ISM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	2222	6618	2033	3854	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCGCCTGACTCCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	44496277	44490664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184
ENSMUSG00000038521.18_124507694_124511394_1	chr6	-	1367	5	ISM	ENSMUSG00000038521.18	ENSMUST00000160505.8	2946	12	7886	390	7886	-387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATCTTGCGCTATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	124511394	124507693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124508700_124509499_124509575_124510232_124510362_124510854_124510934_124511316
ENSMUSG00000038521.18_124508179_124514425_1	chr6	-	1380	8	ISM	ENSMUSG00000038521.18	ENSMUST00000160505.8	2946	12	4855	875	4855	-872	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAAGAGGAGAACCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	124514425	124508178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124508700_124509499_124509575_124510232_124510362_124510854_124510934_124511316_124511433_124512191_124512346_124513290_124513491_124514319
ENSMUSG00000038521.18_124508480_124517856_1	chr6	-	1386	10	ISM	ENSMUSG00000038521.18	ENSMUST00000160505.8	2946	12	1424	1176	1424	-1173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAATGCCCAGAGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	124517856	124508479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124508700_124509499_124509575_124510232_124510362_124510854_124510934_124511316_124511433_124512191_124512346_124513290_124513491_124514319_124514446_124517279_124517458_124517747
ENSMUSG00000038524.14_38091563_38095670_1	chr18	-	1334	4	ISM	ENSMUSG00000038524.14	ENST00000435817.7	4121	20	7151	927	7117	579	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGGAGGGGGAAGGATTC	NA	NA	NA	NA	NA	NA	NA	NA	38095670	38091562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625
ENSMUSG00000038524.14_38091823_38096061_1	chr18	-	1339	5	ISM	ENSMUSG00000038524.14	ENST00000435817.7	4121	20	6760	1187	6726	319	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACTGAGGCTTGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	38096061	38091822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972
ENSMUSG00000038524.14_38091996_38096399_1	chr18	-	1333	7	ISM	ENSMUSG00000038524.14	ENST00000435817.7	4121	20	6422	1360	6388	146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTGGGAATTGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	38096399	38091995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345
ENSMUSG00000038524.14_38092112_38097114_1	chr18	-	1346	8	ISM	ENSMUSG00000038524.14	ENST00000435817.7	4121	20	5707	1476	5673	30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCCACCGAGGGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	38097114	38092111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060
ENSMUSG00000038524.14_38092142_38095797_1	chr18	-	964	4	ISM	ENSMUSG00000038524.14	ENST00000522783.5	2441	19	6990	0	6990	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGGGGGCCTAAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	38095797	38092141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38092708_38092830_38092965_38094295_38094388_38095625
ENSMUSG00000038524.14_38092223_38097374_1	chr18	-	1351	9	ISM	ENSMUSG00000038524.14	ENST00000435817.7	4121	20	5447	1587	5413	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAATGGTCTGAGCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	38097374	38092222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366
ENSMUSG00000038524.14_38092409_38097912_1	chr18	-	1331	10	ISM	ENSMUSG00000038524.14	ENST00000435817.7	4121	20	4909	1773	4875	-267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCACCCCATATCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	38097912	38092408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843
ENSMUSG00000038524.14_38092456_38096461_1	chr18	-	1017	7	ISM	ENSMUSG00000038524.14	ENST00000522783.5	2441	19	6326	314	6326	-314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTGTTCTCATGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	38096461	38092455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38092708_38092830_38092965_38094295_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345
ENSMUSG00000038524.14_38092640_38099040_1	chr18	-	1336	12	ISM	ENSMUSG00000038524.14	ENST00000435817.7	4121	20	3781	2004	3747	-498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGAGTCATTGCCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	38099040	38092639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951
ENSMUSG00000038524.14_38092870_38099561_1	chr18	-	1331	12	ISM	ENSMUSG00000038524.14	ENST00000435817.7	4121	20	3260	2234	3226	-728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGACCCCTAGACATGAT	NA	NA	NA	NA	NA	NA	NA	NA	38099561	38092869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493
ENSMUSG00000038524.14_38095660_38100641_1	chr18	-	1368	12	ISM	ENSMUSG00000038524.14	ENST00000435817.7	4121	20	2180	5024	2146	-3518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGGGCCACCTGAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	38100641	38095659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590
ENSMUSG00000038524.14_38095734_38100686_1	chr18	-	1339	12	ISM	ENSMUSG00000038524.14	ENST00000435817.7	4121	20	2135	5098	2101	-3592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTCTGGAGGGGAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	38100686	38095733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590
ENSMUSG00000038524.14_38095794_38100802_1	chr18	-	1395	12	ISM	ENSMUSG00000038524.14	ENST00000435817.7	4121	20	2019	5158	1985	-3652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCCTGAAGGGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	38100802	38095793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590
ENSMUSG00000038524.14_38096017_38100956_1	chr18	-	1367	12	ISM	ENSMUSG00000038524.14	ENST00000435817.7	4121	20	1865	5381	1831	-3875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGCCATGGCATCGACA	NA	NA	NA	NA	NA	NA	NA	NA	38100956	38096016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812
ENSMUSG00000038525.17_21850877_21865616_1	chr5	+	884	5	FSM	ENSMUSG00000038525.17	ENSMUST00000095495.3	2700	5	-174	1990	0	-1990	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAAGTAAGTAGATTACC	NA	NA	NA	NA	NA	NA	NA	NA	21850876	21865616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550
ENSMUSG00000038525.17_21851051_21866489_1	chr5	+	844	6	FSM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	174	1203	0	-1117	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTAAAGGGTCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	21851050	21866489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
ENSMUSG00000038525.17_21851165_21866633_1	chr5	+	874	6	FSM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	288	1059	114	-973	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCAAAGACTCAAACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	21851164	21866633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
ENSMUSG00000038525.17_21856741_21866789_1	chr5	+	814	4	ISM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	5864	903	5690	-817	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATTTGGGGTTTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	21856740	21866789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21856878_21858373_21858551_21865550_21865623_21866361
ENSMUSG00000038525.17_21856775_21866865_1	chr5	+	856	4	ISM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	5898	827	5724	-741	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATGATCGTGGACAGACT	NA	NA	NA	NA	NA	NA	NA	NA	21856774	21866865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21856878_21858373_21858551_21865550_21865623_21866361
ENSMUSG00000038525.17_21856834_21866939_1	chr5	+	871	4	ISM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	5957	753	5783	-667	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCTGTACTGAAGATACT	NA	NA	NA	NA	NA	NA	NA	NA	21856833	21866939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21856878_21858373_21858551_21865550_21865623_21866361
ENSMUSG00000038525.17_21858395_21867013_1	chr5	+	880	3	ISM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	7518	679	7344	-593	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTAACTCCTGGGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	21858394	21867013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21858551_21865550_21865623_21866361
ENSMUSG00000038526.15_95806117_95812011_1	chr3	-	1261	8	NNC	ENSMUSG00000038526.15	novel	1264	8	NA	NA	5	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTGAGATCCTACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	95812011	95806116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_95806220_95806535_95806653_95806738_95806896_95807051_95807119_95807242_95807339_95807554_95807698_95808404_95808585_95811613
ENSMUSG00000038526.15_95806117_95812011_2	chr3	-	1264	8	NNC	ENSMUSG00000038526.15	novel	1264	8	NA	NA	5	7	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	4195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTGAGATCCTACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	95812011	95806116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_95806220_95806535_95806653_95806738_95806901_95807051_95807119_95807244_95807339_95807554_95807698_95808404_95808585_95811613
ENSMUSG00000038526.15_95806117_95812011_3	chr3	-	1266	8	FSM	ENSMUSG00000038526.15	ENST00000369111.9	1264	8	5	-7	5	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTGAGATCCTACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	95812011	95806116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95806220_95806535_95806653_95806738_95806901_95807051_95807119_95807242_95807339_95807554_95807698_95808404_95808585_95811613
ENSMUSG00000038526.15_95806117_95812011_4	chr3	-	1261	8	NNC	ENSMUSG00000038526.15	novel	1264	8	NA	NA	5	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTGAGATCCTACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	95812011	95806116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_95806220_95806535_95806653_95806738_95806901_95807051_95807119_95807242_95807339_95807554_95807693_95808404_95808585_95811613
ENSMUSG00000038527.10_124470072_124486162_1	chr6	+	1570	6	FSM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	0	1440	0	-1440	multi-exon	TRUE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGACCCCATTTAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	124470071	124486162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_124470190_124470773_124471003_124482189_124482380_124483850_124483953_124484048_124484124_124485306
ENSMUSG00000038527.10_124470817_124486290_1	chr6	+	1537	5	ISM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	745	1312	745	-1312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAGGTAGGGCTACACA	NA	NA	NA	NA	NA	NA	NA	NA	124470816	124486290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124471003_124482189_124482380_124483850_124483953_124484048_124484124_124485306
ENSMUSG00000038527.10_124470867_124486341_1	chr6	+	1538	5	ISM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	795	1261	795	-1261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	124470866	124486341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124471003_124482189_124482380_124483850_124483953_124484048_124484124_124485306
ENSMUSG00000038527.10_124470927_124486418_1	chr6	+	1555	5	ISM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	855	1184	855	-1184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGAAACAGAACCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	124470926	124486418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124471003_124482189_124482380_124483850_124483953_124484048_124484124_124485306
ENSMUSG00000038527.10_124482220_124486536_1	chr6	+	1567	4	ISM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	12148	1066	-3086	-1066	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAATGCTCCCGCTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	124482219	124486536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124482380_124483850_124483953_124484048_124484124_124485306
ENSMUSG00000038527.10_124482271_124486609_1	chr6	+	1589	4	ISM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	12199	993	-3035	-993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTAATTCCCCGACC	NA	NA	NA	NA	NA	NA	NA	NA	124482270	124486609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124482380_124483850_124483953_124484048_124484124_124485306
ENSMUSG00000038527.10_124484073_124486798_1	chr6	+	1543	2	ISM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	14001	804	-1233	-804	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATCCAGTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	124484072	124486798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124484124_124485306
ENSMUSG00000038530.12_169571110_169575192_3	chr1	-	512	5	FSM	ENSMUSG00000038530.12	ENST00000531057.5	531	5	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTAAAACTAGCCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	169575192	169571109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_169571192_169571967_169572087_169572243_169572306_169572785_169572891_169575048
ENSMUSG00000038533.16_154302030_154359768_1	chr2	+	1045	6	ISM	ENSMUSG00000038533.16	ENST00000397800.5	2915	11	46	18203	46	-8565	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACCACCTCTTCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	154302029	154359768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_154302277_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628
ENSMUSG00000038533.16_154302087_154359817_1	chr2	+	1037	6	ISM	ENSMUSG00000038533.16	ENST00000397800.5	2915	11	103	18154	103	-8516	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTATCGGGAACCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	154302086	154359817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_154302277_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628
ENSMUSG00000038533.16_154302202_154363114_1	chr2	+	1031	7	ISM	ENSMUSG00000038533.16	ENST00000397800.5	2915	11	218	14857	218	-5219	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAAGGGAGTGGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	154302201	154363114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_154302277_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070
ENSMUSG00000038533.16_154342366_154365891_1	chr2	+	1020	7	ISM	ENSMUSG00000038533.16	ENST00000397800.5	2915	11	40382	12080	40382	-2442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATCTGACCGTGAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	154342365	154365891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823
ENSMUSG00000038533.16_154342415_154365943_1	chr2	+	1023	7	ISM	ENSMUSG00000038533.16	ENST00000397800.5	2915	11	40431	12028	40431	-2390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGTTGAGGAAAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	154342414	154365943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823
ENSMUSG00000038533.16_154346568_154373160_1	chr2	+	1040	8	ISM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	68167	8116	44584	-4811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTCAGGCCATGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	154346567	154373160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144
ENSMUSG00000038533.16_154346624_154373212_1	chr2	+	1036	8	ISM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	68223	8064	44640	-4759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTTTGAAGTGATTGC	NA	NA	NA	NA	NA	NA	NA	NA	154346623	154373212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144
ENSMUSG00000038533.16_154346678_154373265_1	chr2	+	1035	8	ISM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	68277	8011	44694	-4706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTCAAACGGCAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	154346677	154373265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144
ENSMUSG00000038533.16_154357728_154376884_1	chr2	+	1065	7	ISM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	79327	4392	55744	-1087	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGGACTGGGAGCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	154357727	154376884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
ENSMUSG00000038533.16_154359650_154377083_1	chr2	+	1052	6	ISM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	81249	4193	57666	-888	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAACGGGCTCTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	154359649	154377083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
ENSMUSG00000038533.16_154359719_154377120_1	chr2	+	1020	6	ISM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	81318	4156	57735	-851	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGACCCCTCCACATGGG	NA	NA	NA	NA	NA	NA	NA	NA	154359718	154377120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
ENSMUSG00000038533.16_154359760_154377182_1	chr2	+	1041	6	ISM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	81359	4094	57776	-789	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGGTCGTCAGCAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	154359759	154377182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
ENSMUSG00000038533.16_154363081_154377308_1	chr2	+	1034	5	ISM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	84680	3968	61097	-663	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGCCTCCTCCATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	154363080	154377308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
ENSMUSG00000038533.16_154365904_154377489_1	chr2	+	1059	4	ISM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	87503	3787	63920	-482	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCCTGTCTTCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	154365903	154377489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_154366020_154370756_154370826_154373144_154373333_154376803
ENSMUSG00000038533.16_154373212_154377719_1	chr2	+	1037	2	ISM	ENSMUSG00000038533.16	ENST00000397800.5	2915	11	71228	252	71228	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGATTTTCTAACTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	154373211	154377719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_154373333_154376803
ENSMUSG00000038535.18_72182263_72226510_1	chr9	+	1049	9	ISM	ENSMUSG00000038535.18	ENST00000267807.12	4272	21	3	44527	3	-20956	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAAGGAGACGTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	72182262	72226510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72182318_72203212_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373
ENSMUSG00000038535.18_72206009_72247466_1	chr9	+	2686	16	NNC	ENSMUSG00000038535.18	novel	2716	16	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTCTCTTCTAAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	72206008	72247466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236315_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246897
ENSMUSG00000038535.18_72206009_72247466_2	chr9	+	2686	16	NNC	ENSMUSG00000038535.18	novel	2716	16	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTCTCTTCTAAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	72206008	72247466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246903
ENSMUSG00000038535.18_72206009_72247466_3	chr9	+	2692	16	FSM	ENSMUSG00000038535.18	ENST00000559000.6	2716	16	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTCTCTTCTAAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	72206008	72247466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246897
ENSMUSG00000038535.18_72230338_72258831_1	chr9	+	1020	9	ISM	ENSMUSG00000038535.18	ENSMUST00000184036.8	3459	21	48196	11342	24353	10456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAAGAACCTGTGTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	72230337	72258831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806
ENSMUSG00000038535.18_72236358_72269376_1	chr9	+	1018	9	ISM	ENSMUSG00000038535.18	ENSMUST00000184036.8	3459	21	54216	797	30373	-797	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGATACTATGGAAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	72236357	72269376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ENSMUSG00000038535.18_72238363_72269693_1	chr9	+	1033	8	ISM	ENSMUSG00000038535.18	ENSMUST00000184036.8	3459	21	56221	480	-29121	-480	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGTATCTGATCAAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	72238362	72269693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ENSMUSG00000038535.18_72238611_72269836_1	chr9	+	1047	7	ISM	ENSMUSG00000038535.18	ENSMUST00000184036.8	3459	21	56469	337	-28873	-337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTCTGGTGAGCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	72238610	72269836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ENSMUSG00000038535.18_72242327_72269950_1	chr9	+	1058	6	ISM	ENSMUSG00000038535.18	ENSMUST00000184036.8	3459	21	60185	223	-25157	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATGGTTAGTATGAATT	NA	NA	NA	NA	NA	NA	NA	NA	72242326	72269950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ENSMUSG00000038535.18_72246292_72270173_1	chr9	+	1099	4	ISM	ENSMUSG00000038535.18	ENSMUST00000184036.8	3459	21	64150	0	-21192	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATTTAAAACCATGCATT	NA	NA	NA	NA	NA	NA	NA	NA	72246291	72270173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_72246331_72258806_72258853_72267567_72267624_72269215
ENSMUSG00000038542.15_13127523_13129675_1	chr8	-	929	3	ISM	ENSMUSG00000038542.15	ENSMUST00000164416.8	2860	14	25784	334	25784	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGCAAGAGTTAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	13129675	13127522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_13128290_13128547_13128672_13129637
ENSMUSG00000038542.15_13127602_13129726_1	chr8	-	901	3	ISM	ENSMUSG00000038542.15	ENSMUST00000164416.8	2860	14	25733	413	25733	-413	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGGCTCCTGCACACGTG	NA	NA	NA	NA	NA	NA	NA	NA	13129726	13127601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_13128290_13128547_13128672_13129637
ENSMUSG00000038542.15_13128187_13144184_1	chr8	-	892	9	ISM	ENSMUSG00000038542.15	ENSMUST00000164416.8	2860	14	11275	998	11275	-998	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACAGCGTGCTCCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	13144184	13128186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142
ENSMUSG00000038542.15_13135374_13155065_1	chr8	-	884	9	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	394	-8185	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTACTACGTGGGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	13155065	13135373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145873_13147607_13147669_13148562_13148637_13150324_13150415_13154774
ENSMUSG00000038542.15_13135374_13155125_1	chr8	-	944	9	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	334	-8185	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTACTACGTGGGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	13155125	13135373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145873_13147607_13147669_13148562_13148637_13150324_13150415_13154774
ENSMUSG00000038542.15_13135374_13155189_1	chr8	-	1008	9	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	270	-8185	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTACTACGTGGGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	13155189	13135373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145873_13147607_13147669_13148562_13148637_13150324_13150415_13154774
ENSMUSG00000038544.15_59770122_59775549_1	chr4	-	2532	3	ISM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	8317	485	8259	-485	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAGCTAAGGCAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	59775549	59770121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_59772460_59773915_59774007_59775446
ENSMUSG00000038544.15_59770308_59783808_1	chr4	-	2508	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	58	671	0	-671	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTGAGGATCCCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	59783808	59770307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
ENSMUSG00000038544.15_59770350_59783841_1	chr4	-	2499	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	25	713	25	-713	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGGACAAAAAGGTCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	59783841	59770349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
ENSMUSG00000038545.14_46967939_46974598_1	chr17	+	2550	16	ISM	ENSMUSG00000038545.14	ENSMUST00000043464.14	5530	26	6676	692	6676	-692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCCTTGTTGTCCGAATC	NA	NA	NA	NA	NA	NA	NA	NA	46967938	46974598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463
ENSMUSG00000038546.10_43556151_43569869_1	chr13	-	1470	5	ISM	ENSMUSG00000038546.10	ENSMUST00000222651.2	1951	14	62514	-589	62514	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTGTCAGTTGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	43569869	43556150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800
ENSMUSG00000038546.10_43556293_43573152_1	chr13	-	1505	6	ISM	ENSMUSG00000038546.10	ENSMUST00000222651.2	1951	14	59231	-447	59231	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCGTGTCTTAATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	43573152	43556292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051
ENSMUSG00000038546.10_43556413_43573207_1	chr13	-	1440	6	ISM	ENSMUSG00000038546.10	ENSMUST00000222651.2	1951	14	59176	-327	59176	-262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAACTACAGATGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	43573207	43556412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051
ENSMUSG00000038546.10_43556515_43574758_1	chr13	-	1445	7	ISM	ENSMUSG00000038546.10	ENSMUST00000222651.2	1951	14	57625	-225	57625	225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTCAGGAGCTGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	43574758	43556514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686
ENSMUSG00000038546.10_43556583_43574795_1	chr13	-	1414	7	ISM	ENSMUSG00000038546.10	ENSMUST00000222651.2	1951	14	57588	-157	57588	157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCCGACAGTTTGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	43574795	43556582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686
ENSMUSG00000038546.10_43556731_43578539_1	chr13	-	1413	9	ISM	ENSMUSG00000038546.10	ENSMUST00000222651.2	1951	14	53844	-9	53844	9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCTTTGTTGGGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	43578539	43556730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505
ENSMUSG00000038546.10_43556740_43578584_1	chr13	-	1449	9	ISM	ENSMUSG00000038546.10	ENSMUST00000222651.2	1951	14	53799	0	53799	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCCTGCCTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	43578584	43556739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505
ENSMUSG00000038546.10_43556947_43588365_1	chr13	-	1443	10	ISM	ENSMUSG00000038546.10	ENST00000011619.6	3364	13	46390	796	44018	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATTATGTACTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	43588365	43556946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578710_43588289
ENSMUSG00000038546.10_43557100_43615237_1	chr13	-	1485	12	ISM	ENSMUSG00000038546.10	ENST00000011619.6	3364	13	19518	949	17146	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGATGGCTCGGTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	43615237	43557099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578710_43588289_43588458_43589565_43589619_43615187
ENSMUSG00000038546.10_43565897_43633962_1	chr13	-	1434	11	ISM	ENSMUSG00000038546.10	ENST00000011619.6	3364	13	793	9746	793	-9157	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTGAAGGTAAGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	43633962	43565896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578710_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ENSMUSG00000038546.10_43565946_43634023_1	chr13	-	1446	11	ISM	ENSMUSG00000038546.10	ENST00000011619.6	3364	13	732	9795	732	-9206	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGCAGCTGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	43634023	43565945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578710_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ENSMUSG00000038546.10_43566000_43634147_1	chr13	-	1516	11	ISM	ENSMUSG00000038546.10	ENST00000011619.6	3364	13	608	9849	608	-9260	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTCAGGCTGCCATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	43634147	43565999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578710_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ENSMUSG00000038546.10_43569914_43634350_1	chr13	-	1445	9	ISM	ENSMUSG00000038546.10	ENST00000011619.6	3364	13	405	13763	405	-13174	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGCACACCAATCATA	NA	NA	NA	NA	NA	NA	NA	NA	43634350	43569913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578710_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ENSMUSG00000038546.10_43573222_43634463_1	chr13	-	1356	8	ISM	ENSMUSG00000038546.10	ENST00000011619.6	3364	13	292	17071	292	-16482	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAATGGTACAGACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	43634463	43573221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43573243_43574686_43574796_43576026_43576140_43578505_43578710_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ENSMUSG00000038546.10_43574711_43634596_1	chr13	-	1444	7	ISM	ENSMUSG00000038546.10	ENST00000011619.6	3364	13	159	18560	159	-17971	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAATCTCCTTTTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	43634596	43574710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43574796_43576026_43576140_43578505_43578710_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ENSMUSG00000038546.10_43576057_43634758_1	chr13	-	1491	6	ISM	ENSMUSG00000038546.10	ENST00000011619.6	3364	13	-3	19906	0	-19317	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATTAGCTTCCATTAAG	NA	NA	NA	NA	NA	NA	NA	NA	43634758	43576056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_43576140_43578505_43578710_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ENSMUSG00000038552.15_31449586_31452418_1	chr5	-	1737	5	ISM	ENSMUSG00000038552.15	ENSMUST00000172435.8	2333	7	862	0	797	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTTCTGGGACCTATT	NA	NA	NA	NA	NA	NA	NA	NA	31452418	31449585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31450831_31451029_31451158_31451447_31451538_31451973_31452179_31452349
ENSMUSG00000038552.15_31449768_31452603_1	chr5	-	1649	6	ISM	ENSMUSG00000038552.15	ENSMUST00000172435.8	2333	7	677	182	612	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTCACCCCGGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	31452603	31449767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31450831_31451029_31451158_31451447_31451538_31451973_31452179_31452349_31452466_31452556
ENSMUSG00000038552.15_31449820_31452653_1	chr5	-	1647	6	ISM	ENSMUSG00000038552.15	ENSMUST00000172435.8	2333	7	627	234	562	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAGGAGCTGACAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	31452653	31449819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31450831_31451029_31451158_31451447_31451538_31451973_31452179_31452349_31452466_31452556
ENSMUSG00000038552.15_31449880_31452777_1	chr5	-	1711	6	ISM	ENSMUSG00000038552.15	ENSMUST00000172435.8	2333	7	503	294	438	-294	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCCTGCACTTTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	31452777	31449879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31450831_31451029_31451158_31451447_31451538_31451973_31452179_31452349_31452466_31452556
ENSMUSG00000038552.15_31450230_31453215_1	chr5	-	1624	7	FSM	ENSMUSG00000038552.15	ENSMUST00000172435.8	2333	7	65	644	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGACTGGTTCCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	31453215	31450229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_31450831_31451029_31451158_31451447_31451538_31451973_31452179_31452349_31452466_31452556_31452702_31452876
ENSMUSG00000038563.15_82301116_82342106_1	chr7	+	1271	11	FSM	ENSMUSG00000038563.15	ENST00000560401.5	1392	11	28	93	28	-93	multi-exon	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGCATTTGCTCGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	82301115	82342106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037
ENSMUSG00000038564.12_31420360_31423706_1	chr5	-	1021	9	ISM	ENSMUSG00000038564.12	ENST00000675690.1	5252	48	24720	9679	24720	-9679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGGGCCAAAAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	31423706	31420359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31420407_31420709_31420827_31420914_31421051_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518
ENSMUSG00000038564.12_31434141_31448451_1	chr5	-	1768	15	FSM	ENSMUSG00000038564.12	ENST00000416524.2	1743	15	-25	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGGGCAATGCAGAACTA	NA	NA	NA	NA	NA	NA	NA	NA	31448451	31434140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440376_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443173_31443421_31443462_31443920_31444034_31444237_31444459_31448317
ENSMUSG00000038564.12_31434141_31448451_2	chr5	-	1763	15	NNC	ENSMUSG00000038564.12	novel	1743	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGGGCAATGCAGAACTA	NA	NA	NA	NA	NA	NA	NA	NA	31448451	31434140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440381_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443173_31443421_31443462_31443920_31444034_31444237_31444459_31448317
ENSMUSG00000038564.12_31434141_31448451_3	chr5	-	1767	15	NNC	ENSMUSG00000038564.12	novel	1743	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGGGCAATGCAGAACTA	NA	NA	NA	NA	NA	NA	NA	NA	31448451	31434140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440376_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443173_31443421_31443462_31443920_31444034_31444237_31444459_31448318
ENSMUSG00000038570.16_82292979_82294903_1	chr7	-	125	2	FSM	ENSMUSG00000038570.16	ENST00000565432.1	391	2	137	129	137	-129	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTGGTACTACCTACAA	NA	NA	NA	NA	NA	NA	NA	NA	82294903	82292978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_82293058_82294857
ENSMUSG00000038604.10_106341305_106342985_1	chr8	+	638	7	ISM	ENSMUSG00000038604.10	ENST00000428437.6	4031	20	276	5880	276	-5866	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTACTCACAGAATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	106341304	106342985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106341426_106341574_106341654_106342148_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889
ENSMUSG00000038604.10_106342442_106343547_1	chr8	+	328	5	ISM	ENSMUSG00000038604.10	ENST00000428437.6	4031	20	1413	5318	1413	-5304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGTGTCTCCTGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	106342441	106343547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509
ENSMUSG00000038604.10_106343820_106344228_1	chr8	+	325	2	ISM	ENSMUSG00000038604.10	ENST00000428437.6	4031	20	2791	4637	2791	-4623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGATGCTGCCTTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	106343819	106344228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106343864_106343947
ENSMUSG00000038604.10_106345448_106347587_1	chr8	+	657	5	ISM	ENSMUSG00000038604.10	ENST00000428437.6	4031	20	4419	1278	4419	-1264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGGACAGCCCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	106345447	106347587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481
ENSMUSG00000038604.10_106347150_106347855_1	chr8	+	328	3	ISM	ENSMUSG00000038604.10	ENST00000428437.6	4031	20	6121	1010	6121	-996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGGTCCACGGCAACAA	NA	NA	NA	NA	NA	NA	NA	NA	106347149	106347855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106347209_106347481_106347641_106347745
ENSMUSG00000038604.10_106347494_106348576_1	chr8	+	659	5	ISM	ENSMUSG00000038604.10	ENST00000428437.6	4031	20	6465	289	6465	-275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTCATCAGGCACTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	106347493	106348576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ENSMUSG00000038604.10_106347844_106348851_1	chr8	+	689	4	ISM	ENSMUSG00000038604.10	ENST00000428437.6	4031	20	6815	14	6815	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTCCTACATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	106347843	106348851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106347943_106348025_106348110_106348202_106348294_106348436
ENSMUSG00000038607.13_59035088_59041699_1	chr4	+	988	3	FSM	ENSMUSG00000038607.13	ENSMUST00000041160.13	1192	3	0	204	0	-204	multi-exon	FALSE	canonical	NA	NA	NA	NA	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACAATTAGAACATTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	59035087	59041699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_59035319_59039226_59039359_59041074
ENSMUSG00000038607.13_59035088_59041699_2	chr4	+	983	3	NNC	ENSMUSG00000038607.13	novel	1192	3	NA	NA	0	-204	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACAATTAGAACATTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	59035087	59041699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_59035319_59039226_59039359_59041079
ENSMUSG00000038607.13_59035232_59041888_1	chr4	+	1028	3	NNC	ENSMUSG00000038607.13	novel	1192	3	NA	NA	144	-15	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCATGACAGCAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	59035231	59041888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_59035319_59039226_59039359_59041079
ENSMUSG00000038607.13_59035232_59041888_2	chr4	+	1033	3	FSM	ENSMUSG00000038607.13	ENSMUST00000041160.13	1192	3	144	15	144	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	2329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCATGACAGCAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	59035231	59041888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_59035319_59039226_59039359_59041074
ENSMUSG00000038612.17_95566677_95568316_1	chr3	+	669	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	578	2171	509	182	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAAAGTGCTCCCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	95566676	95568316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95566799_95567071_95567320_95568017
ENSMUSG00000038615.18_96710919_96714630_1	chr11	-	1046	4	FSM	ENSMUSG00000038615.18	ENST00000536222.5	2164	4	192	926	192	-926	multi-exon	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCAGCTCGAAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	96714630	96710918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714383
ENSMUSG00000038618.13_140795812_140798459_1	chr7	+	1374	6	FSM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	39	112	5	-109	multi-exon	TRUE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAGTATGGACAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	140795811	140798459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
ENSMUSG00000038618.13_140796613_140798571_1	chr7	+	1465	5	ISM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	840	0	806	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	140796612	140798571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
ENSMUSG00000038619.13_95532337_95535966_1	chr3	+	433	3	FSM	ENSMUSG00000038619.13	ENST00000369016.8	485	3	0	52	0	-52	multi-exon	FALSE	canonical	NA	NA	NA	NA	2823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGGACCTGCCCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	95532336	95535966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95532488_95534059_95534227_95535851
ENSMUSG00000038619.13_95532337_95536018_1	chr3	+	485	3	FSM	ENSMUSG00000038619.13	ENST00000369016.8	485	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACCTGGGCCCCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	95532336	95536018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95532488_95534059_95534227_95535851
ENSMUSG00000038619.13_95534100_95538755_1	chr3	+	307	3	FSM	ENSMUSG00000038619.13	ENST00000361631.9	628	3	42	279	42	-279	multi-exon	FALSE	canonical	NA	NA	NA	NA	2436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCTTCCTGGGGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	95534099	95538755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95534227_95535851_95536019_95538742
ENSMUSG00000038619.13_95534142_95535966_1	chr3	+	153	2	ISM	ENSMUSG00000038619.13	ENST00000638926.1	344	3	1711	52	84	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGGACCTGCCCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	95534141	95535966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95534186_95535857
ENSMUSG00000038619.13_95534157_95538802_1	chr3	+	297	3	FSM	ENSMUSG00000038619.13	ENST00000361631.9	628	3	99	232	99	-232	multi-exon	FALSE	canonical	NA	NA	NA	NA	1764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTGCTGGCTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	95534156	95538802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95534227_95535851_95536019_95538742
ENSMUSG00000038619.13_95534213_95538859_1	chr3	+	298	3	FSM	ENSMUSG00000038619.13	ENST00000361631.9	628	3	155	175	155	-175	multi-exon	FALSE	canonical	NA	NA	NA	NA	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTGCAGGCTAGAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	95534212	95538859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95534227_95535851_95536019_95538742
ENSMUSG00000038619.13_95535937_95538945_1	chr3	+	285	2	ISM	ENSMUSG00000038619.13	ENST00000361631.9	628	3	1879	89	1879	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTTTTGTTTTACC	NA	NA	NA	NA	NA	NA	NA	NA	95535936	95538945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95536019_95538742
ENSMUSG00000038622.9_52576036_52593559_1	chr15	+	303	3	FSM	ENSMUSG00000038622.9	ENST00000522839.1	435	3	133	-1	133	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGATATTTAAATCTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	52576035	52593559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_52576083_52582741_52582901_52593462
ENSMUSG00000038628.9_181506153_181510435_1	chr2	+	737	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	23	2188	23	-2188	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTATGTAGACAAGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	181506152	181510435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_181506363_181507738_181507827_181509996
ENSMUSG00000038628.9_181506153_181510488_1	chr2	+	790	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	23	2135	23	-2135	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGCTGGGGTTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	181506152	181510488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_181506363_181507738_181507827_181509996
ENSMUSG00000038628.9_181506298_181510537_1	chr2	+	694	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	168	2086	168	-2086	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTTCTAATCTTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	181506297	181510537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_181506363_181507738_181507827_181509996
ENSMUSG00000038633.6_182103337_182110369_1	chr1	-	2043	3	NNC	ENSMUSG00000038633.6	novel	2048	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGTGTCACTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	182110369	182103336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_182104454_182106540_182107284_182110186
ENSMUSG00000038633.6_182103337_182110369_2	chr1	-	2043	3	NNC	ENSMUSG00000038633.6	novel	2048	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGTGTCACTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	182110369	182103336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_182104459_182106540_182107279_182110186
ENSMUSG00000038641.13_37509476_37541441_1	chr6	+	662	6	ISM	ENSMUSG00000038641.13	ENST00000411726.6	717	7	14	2660	14	-2660	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTCCGAGGATCACTAG	NA	NA	NA	NA	NA	NA	NA	NA	37509475	37541441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_37509582_37512963_37513081_37527140_37527219_37534423_37534534_37535303_37535470_37541356
ENSMUSG00000038641.13_37509476_37544102_1	chr6	+	704	7	FSM	ENSMUSG00000038641.13	ENST00000411726.6	717	7	14	-1	14	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAAATTTCTTCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	37509475	37544102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_37509582_37512963_37513081_37527140_37527219_37534423_37534534_37535303_37535470_37541356_37541440_37544058
ENSMUSG00000038641.13_37512962_37544102_1	chr6	+	600	6	ISM	ENSMUSG00000038641.13	ENST00000411726.6	717	7	3500	-1	3500	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAAATTTCTTCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	37512961	37544102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_37513081_37527140_37527219_37534423_37534534_37535303_37535470_37541356_37541440_37544058
ENSMUSG00000038642.11_95436819_95463614_1	chr3	+	813	6	FSM	ENSMUSG00000038642.11	ENST00000448301.7	879	6	66	0	66	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAGCTATTTTTACACC	NA	NA	NA	NA	NA	NA	NA	NA	95436818	95463614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95436872_95446031_95446155_95450323_95450474_95454106_95454273_95457363_95457467_95463396
ENSMUSG00000038642.11_95436819_95463614_2	chr3	+	806	6	NNC	ENSMUSG00000038642.11	novel	879	6	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAGCTATTTTTACACC	NA	NA	NA	NA	NA	NA	NA	NA	95436818	95463614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_95436872_95446038_95446155_95450323_95450474_95454106_95454273_95457363_95457467_95463396
ENSMUSG00000038644.15_44182210_44188228_1	chr7	-	1601	15	ISM	ENSMUSG00000038644.15	ENST00000613923.6	3295	27	9999	0	4633	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACGGGACAAGGAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	44188228	44182209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187103_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196
ENSMUSG00000038644.15_44182210_44188322_1	chr7	-	1695	15	ISM	ENSMUSG00000038644.15	ENST00000613923.6	3295	27	9905	0	4539	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACGGGACAAGGAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	44188322	44182209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187103_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196
ENSMUSG00000038644.15_44182210_44198204_1	chr7	-	3432	27	NNC	ENSMUSG00000038644.15	novel	3460	27	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1796	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACGGGACAAGGAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	44198204	44182209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183906_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192671_44192889_44198108
ENSMUSG00000038644.15_44182210_44198204_2	chr7	-	3433	27	NNC	ENSMUSG00000038644.15	novel	3460	27	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1982	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACGGGACAAGGAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	44198204	44182209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192298_44192671_44192889_44198108
ENSMUSG00000038644.15_44182210_44198204_3	chr7	-	3438	27	FSM	ENSMUSG00000038644.15	ENST00000601098.6	3460	27	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACGGGACAAGGAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	44198204	44182209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192671_44192889_44198108
ENSMUSG00000038644.15_44183107_44188592_1	chr7	-	1617	13	ISM	ENSMUSG00000038644.15	ENST00000613923.6	3295	27	9635	897	4269	-897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACCGAGTTACAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	44188592	44183106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187103_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477
ENSMUSG00000038644.15_44183320_44188928_1	chr7	-	1630	13	ISM	ENSMUSG00000038644.15	ENST00000613923.6	3295	27	9299	1110	3933	-1110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGCTGCGTAAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	44188928	44183319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187103_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785
ENSMUSG00000038644.15_44183808_44190056_1	chr7	-	1615	13	ISM	ENSMUSG00000038644.15	ENST00000613923.6	3295	27	8171	1598	2805	-1598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCCCACCTGGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	44190056	44183807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187103_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948
ENSMUSG00000038644.15_44184033_44190361_1	chr7	-	1557	13	ISM	ENSMUSG00000038644.15	ENST00000613923.6	3295	27	7866	1823	2500	-1823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGACTATGCTGGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	44190361	44184032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187103_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267
ENSMUSG00000038644.15_44184440_44190830_1	chr7	-	1655	13	ISM	ENSMUSG00000038644.15	ENST00000613923.6	3295	27	7397	2230	2031	-2230	internal_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	44190830	44184439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44184617_44185122_44185261_44185354_44185451_44187103_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698
ENSMUSG00000038644.15_44184581_44190950_1	chr7	-	1549	14	ISM	ENSMUSG00000038644.15	ENST00000613923.6	3295	27	7277	2371	1911	-2371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGGCCTGCTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	44190950	44184580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44184617_44185122_44185261_44185354_44185451_44187103_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913
ENSMUSG00000038644.15_44185153_44191105_1	chr7	-	1556	14	ISM	ENSMUSG00000038644.15	ENST00000613923.6	3295	27	7122	2943	1756	-2943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCACCCATCCGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	44191105	44185152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44185261_44185354_44185451_44187103_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077
ENSMUSG00000038644.15_44185209_44191155_1	chr7	-	1550	14	ISM	ENSMUSG00000038644.15	ENST00000613923.6	3295	27	7072	2999	1706	-2999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGAAGCAATGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	44191155	44185208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44185261_44185354_44185451_44187103_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077
ENSMUSG00000038644.15_44188343_44198200_1	chr7	-	1553	13	ISM	ENSMUSG00000038644.15	ENST00000613923.6	3295	27	27	6133	26	-6133	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACGCCTTTCTGCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	44198200	44188342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192671_44192861_44198174
ENSMUSG00000038646.14_81412673_81419064_1	chr7	+	1277	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	0	175	0	-164	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTCATACAGTTATAGT	NA	NA	NA	NA	NA	NA	NA	NA	81412672	81419064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_81412805_81417274_81417472_81418116
ENSMUSG00000038646.14_81412798_81419112_1	chr7	+	1200	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	125	127	125	-116	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGAAATATTTTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	81412797	81419112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_81412805_81417274_81417472_81418116
ENSMUSG00000038646.14_81417274_81419239_1	chr7	+	1321	2	ISM	ENSMUSG00000038646.14	ENSMUST00000118190.2	1391	3	4243	-11	4243	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTAGTTTTGACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	81417273	81419239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_81417472_81418116
ENSMUSG00000038646.14_81417422_81419239_1	chr7	+	1173	2	ISM	ENSMUSG00000038646.14	ENSMUST00000118190.2	1391	3	4391	-11	4391	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTAGTTTTGACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	81417421	81419239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_81417472_81418116
ENSMUSG00000038650.16_140740241_140749139_1	chr7	-	2083	10	NNC	ENSMUSG00000038650.16	novel	2091	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3997	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGGTCCTTGTCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	140749139	140740240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_140740479_140740562_140740726_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748588
ENSMUSG00000038650.16_140740241_140749139_2	chr7	-	2084	10	NNC	ENSMUSG00000038650.16	novel	2091	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGGTCCTTGTCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	140749139	140740240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_140740479_140740562_140740734_140742336_140742501_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748588
ENSMUSG00000038650.16_140740241_140749139_3	chr7	-	2086	10	NNC	ENSMUSG00000038650.16	novel	2091	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6022	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGGTCCTTGTCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	140749139	140740240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746600_140746701_140748588
ENSMUSG00000038650.16_140740241_140749139_4	chr7	-	2084	10	NNC	ENSMUSG00000038650.16	novel	2091	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGGTCCTTGTCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	140749139	140740240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744085_140744416_140744588_140746595_140746701_140748588
ENSMUSG00000038650.16_140743058_140752770_1	chr7	-	868	6	ISM	ENSMUSG00000038650.16	ENSMUST00000167493.9	1656	10	0	2817	0	-2817	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTGCTTCCCAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	140752770	140743057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140752654
ENSMUSG00000038650.16_140743126_140752770_1	chr7	-	800	6	ISM	ENSMUSG00000038650.16	ENSMUST00000167493.9	1656	10	0	2885	0	-2885	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGCTACAGGAACTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	140752770	140743125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140752654
ENSMUSG00000038656.6_145377167_145387202_1	chr5	-	633	3	ISM	ENSMUSG00000038656.6	ENST00000354829.7	808	4	585	0	585	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGAGAAAACTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	145387202	145377166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_145377330_145378763_145378991_145386959
ENSMUSG00000038656.6_145378762_145387355_1	chr5	-	625	2	ISM	ENSMUSG00000038656.6	ENST00000354829.7	808	4	432	1595	432	-1595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGAACCTCAGGAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	145387355	145378761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_145378991_145386959
ENSMUSG00000038668.15_58435255_58553357_1	chr4	-	3505	4	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58553357	58435254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_58437635_58486476_58487218_58504621_58504782_58553133
ENSMUSG00000038668.15_58435255_58553357_2	chr4	-	3504	4	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58553357	58435254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_58437635_58486476_58487225_58504621_58504774_58553133
ENSMUSG00000038668.15_58436011_58553553_1	chr4	-	2665	4	FSM	ENSMUSG00000038668.15	ENSMUST00000107575.9	3421	4	0	756	0	-756	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCACTTTATAAAAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	58553553	58436010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553420
ENSMUSG00000038671.16_181000308_181001497_1	chr2	-	1113	2	ISM	ENSMUSG00000038671.16	ENSMUST00000108808.8	1133	8	5647	-585	5647	585	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCTGTCTAACCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	181001497	181000307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_181001355_181001431
ENSMUSG00000038671.16_181000893_181007060_1	chr2	-	1043	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	137	1267	84	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGGGTGTGTGGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	181007060	181000892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ENSMUSG00000038671.16_181000893_181007197_1	chr2	-	1180	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	0	1267	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGGGTGTGTGGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	181007197	181000892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ENSMUSG00000038683.17_41154742_41162710_1	chr13	+	576	6	ISM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	243	3781	243	-3781	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCCCCAAGTGGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	41154741	41162710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694
ENSMUSG00000038683.17_41154742_41162768_1	chr13	+	634	6	ISM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	243	3723	243	-3723	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGGGCACGGCGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	41154741	41162768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694
ENSMUSG00000038683.17_41158211_41163021_1	chr13	+	658	6	ISM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	3712	3470	3712	-3470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCTTTCTTTTTAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	41158210	41163021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923
ENSMUSG00000038683.17_41158321_41164703_1	chr13	+	593	7	ISM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	3822	1788	3822	-1788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCACAGCATCAAATGATG	NA	NA	NA	NA	NA	NA	NA	NA	41158320	41164703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658
ENSMUSG00000038683.17_41161547_41165879_1	chr13	+	608	7	ISM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	7048	612	7048	-612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGCAGCAAATGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	41161546	41165879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809
ENSMUSG00000038683.17_41161735_41166067_1	chr13	+	575	7	ISM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	7236	424	7236	-424	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGACACAGTTCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	41161734	41166067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
ENSMUSG00000038683.17_41162778_41166227_1	chr13	+	572	5	ISM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	8279	264	8279	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTGGCAAATCCCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	41162777	41166227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
ENSMUSG00000038685.19_180962704_180977703_1	chr2	+	828	9	ISM	ENSMUSG00000038685.19	ENST00000360203.11	3052	29	77	18524	77	-18524	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTCCTTTGACTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	180962703	180977703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685
ENSMUSG00000038685.19_180962760_180977754_1	chr2	+	823	9	ISM	ENSMUSG00000038685.19	ENST00000360203.11	3052	29	133	18473	133	-18473	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAACCAGGTTTTGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	180962759	180977754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685
ENSMUSG00000038685.19_180962804_180977811_1	chr2	+	836	9	ISM	ENSMUSG00000038685.19	ENST00000360203.11	3052	29	177	18416	177	-18416	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCATTGTAGACACGTC	NA	NA	NA	NA	NA	NA	NA	NA	180962803	180977811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685
ENSMUSG00000038685.19_180964103_180981034_1	chr2	+	937	10	ISM	ENSMUSG00000038685.19	ENST00000318100.9	2825	28	-5	15193	-5	-15193	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGATAGGTGCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	180964102	180981034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955
ENSMUSG00000038685.19_180964234_180982350_1	chr2	+	868	11	ISM	ENSMUSG00000038685.19	ENST00000318100.9	2825	28	126	13877	126	-13877	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCACTGGACCAGATAATC	NA	NA	NA	NA	NA	NA	NA	NA	180964233	180982350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288
ENSMUSG00000038685.19_180964592_180983373_1	chr2	+	892	11	ISM	ENSMUSG00000038685.19	ENST00000318100.9	2825	28	484	12854	484	-12854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAGACTGCTTTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	180964591	180983373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317
ENSMUSG00000038685.19_180965155_180988699_1	chr2	+	872	11	ISM	ENSMUSG00000038685.19	ENST00000318100.9	2825	28	1047	7528	1047	-7528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGCAGCTTTCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	180965154	180988699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624
ENSMUSG00000038685.19_180965474_180988887_1	chr2	+	874	11	ISM	ENSMUSG00000038685.19	ENST00000318100.9	2825	28	1366	7340	1366	-7340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAAATCTTCACTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	180965473	180988887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805
ENSMUSG00000038685.19_180972586_180991100_1	chr2	+	867	10	ISM	ENSMUSG00000038685.19	ENST00000318100.9	2825	28	8478	5127	8478	-5127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTATGAGTCACCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	180972585	180991100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967
ENSMUSG00000038685.19_180976703_180991369_1	chr2	+	898	10	ISM	ENSMUSG00000038685.19	ENST00000318100.9	2825	28	12595	4858	12595	-4858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAAGGGTCCTGCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	180976702	180991369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255
ENSMUSG00000038685.19_180977729_180991748_1	chr2	+	889	11	ISM	ENSMUSG00000038685.19	ENST00000318100.9	2825	28	13621	4479	13621	-4479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAAAGCCTGGAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	180977728	180991748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687
ENSMUSG00000038685.19_180980846_180991998_1	chr2	+	879	11	NIC	ENSMUSG00000038685.19	novel	2825	28	NA	NA	16738	-4229	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGAGACAAATTAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	180980845	180991998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991925
ENSMUSG00000038685.19_180982352_180992948_1	chr2	+	900	11	NIC	ENSMUSG00000038685.19	novel	2825	28	NA	NA	18244	-3279	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGGTTGGAGGCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	180982351	180992948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991925_180991997_180992427_180992506_180992819
ENSMUSG00000038685.19_180988665_180993087_1	chr2	+	830	10	NIC	ENSMUSG00000038685.19	novel	2825	28	NA	NA	24557	-3140	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAACCAGGCTATTGGG	NA	NA	NA	NA	NA	NA	NA	NA	180988664	180993087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991925_180991997_180992427_180992506_180992819_180992967_180993044
ENSMUSG00000038685.19_180990966_180993492_1	chr2	+	912	9	NIC	ENSMUSG00000038685.19	novel	2825	28	NA	NA	26858	-2735	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCTCCAAATGCCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	180990965	180993492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991925_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368
ENSMUSG00000038685.19_180991248_180993747_1	chr2	+	937	9	NIC	ENSMUSG00000038685.19	novel	2825	28	NA	NA	27140	-2480	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGGGGTTGGGTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	180991247	180993747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_180991370_180991461_180991503_180991687_180991774_180991925_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595
ENSMUSG00000038685.19_180991460_180993856_1	chr2	+	843	9	ISM	ENSMUSG00000038685.19	ENST00000318100.9	2825	28	27352	2371	27352	-2371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCAGCCTGTGTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	180991459	180993856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180991503_180991687_180991778_180991925_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833
ENSMUSG00000038685.19_180991688_180993974_1	chr2	+	918	8	ISM	ENSMUSG00000038685.19	ENST00000318100.9	2825	28	27580	2253	27580	-2253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGCGGGGTGAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	180991687	180993974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180991778_180991925_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833
ENSMUSG00000038685.19_180991921_180994641_1	chr2	+	928	8	ISM	ENSMUSG00000038685.19	ENST00000318100.9	2825	28	27813	1586	27813	-1586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTAGTGTCCCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	180991920	180994641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545
ENSMUSG00000038685.19_180992435_180995808_1	chr2	+	884	8	ISM	ENSMUSG00000038685.19	ENST00000318100.9	2825	28	28327	419	28327	-419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCATGGTGGCTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	180992434	180995808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769
ENSMUSG00000038685.19_180992854_180995880_1	chr2	+	851	7	ISM	ENSMUSG00000038685.19	ENST00000318100.9	2825	28	28746	347	28746	-347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGAGTTCTGATGACTT	NA	NA	NA	NA	NA	NA	NA	NA	180992853	180995880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769
ENSMUSG00000038685.19_180992915_180995920_1	chr2	+	830	7	ISM	ENSMUSG00000038685.19	ENST00000318100.9	2825	28	28807	307	28807	-307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGTCTCTTTGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	180992914	180995920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769
ENSMUSG00000038685.19_180993041_180996227_1	chr2	+	912	7	ISM	ENSMUSG00000038685.19	ENST00000318100.9	2825	28	28933	0	28933	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCAGGTAACAACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	180993040	180996227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145
ENSMUSG00000038690.16_145120508_145128321_1	chr5	-	404	4	FSM	ENSMUSG00000038690.16	ENSMUST00000161741.8	955	4	551	0	81	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTGTAGTCATTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	145128321	145120507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_145120678_145121341_145121459_145123935_145124044_145128312
ENSMUSG00000038690.16_145120508_145128422_1	chr5	-	505	4	FSM	ENSMUSG00000038690.16	ENSMUST00000161741.8	955	4	450	0	-20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTGTAGTCATTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	145128422	145120507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_145120678_145121341_145121459_145123935_145124044_145128312
ENSMUSG00000038690.16_145121342_145128508_1	chr5	-	421	3	ISM	ENSMUSG00000038690.16	ENSMUST00000161741.8	955	4	364	834	-106	-823	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCTCTAGCATGACC	NA	NA	NA	NA	NA	NA	NA	NA	145128508	145121341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_145121459_145123935_145124044_145128312
ENSMUSG00000038690.16_145123965_145128691_1	chr5	-	458	2	ISM	ENSMUSG00000038690.16	ENSMUST00000161741.8	955	4	181	3457	181	-3446	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGCATTGCCGGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	145128691	145123964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_145124044_145128312
ENSMUSG00000038695.14_44117513_44120600_1	chr7	+	452	4	ISM	ENSMUSG00000038695.14	ENSMUST00000035844.11	930	5	109	476	-5	-360	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGGGGCTGCTGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	44117512	44120600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44117615_44118233_44118394_44119835_44119962_44120536
ENSMUSG00000038695.14_44117575_44119910_1	chr7	+	390	4	ISM	ENSMUSG00000038695.14	ENSMUST00000118493.8	922	6	79	1135	57	-1050	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCCCTGCAGGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	44117574	44119910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44117615_44117729_44117842_44118230_44118394_44119835
ENSMUSG00000038696.15_34296874_34443098_1	chr2	+	1532	8	NNC	ENSMUSG00000038696.15	novel	1541	8	NA	NA	8	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTGTATTTCTTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	34296873	34443098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_34297102_34322014_34322343_34325144_34325235_34334274_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34442816
ENSMUSG00000038696.15_34296874_34443098_2	chr2	+	1537	8	FSM	ENSMUSG00000038696.15	ENST00000394060.7	1541	8	8	-4	8	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTGTATTTCTTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	34296873	34443098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_34297102_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34442816
ENSMUSG00000038696.15_34296874_34513487_1	chr2	+	1375	10	FSM	ENSMUSG00000038696.15	ENST00000394063.5	2865	10	17	1473	8	-89	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAACAAAGAAAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	34296873	34513487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_34297102_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ENSMUSG00000038696.15_34322037_34514301_1	chr2	+	2357	11	FSM	ENSMUSG00000038696.15	ENSMUST00000113126.3	3018	11	0	661	0	-659	multi-exon	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCAGGGTCTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	34322036	34514301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ENSMUSG00000038696.15_34322195_34514408_1	chr2	+	2306	11	FSM	ENSMUSG00000038696.15	ENSMUST00000113126.3	3018	11	158	554	158	-552	multi-exon	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCTGCTGCTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	34322194	34514408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ENSMUSG00000038696.15_34387744_34514804_1	chr2	+	2284	8	ISM	ENSMUSG00000038696.15	ENSMUST00000113126.3	3018	11	65707	158	65707	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCCCCCCAAAAGAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	34387743	34514804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ENSMUSG00000038696.15_34408681_34514962_1	chr2	+	2304	7	ISM	ENSMUSG00000038696.15	ENSMUST00000113126.3	3018	11	86644	0	86644	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTATATTGCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	34408680	34514962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ENSMUSG00000038696.15_34423830_34514199_1	chr2	+	1330	6	ISM	ENSMUSG00000038696.15	ENSMUST00000113126.3	3018	11	101793	763	101793	623	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCGTAGCCTTCTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	34423829	34514199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ENSMUSG00000038696.15_34471234_34514397_1	chr2	+	1310	4	ISM	ENSMUSG00000038696.15	ENSMUST00000113126.3	3018	11	149197	565	149197	-563	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCAGACGCTGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	34471233	34514397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_34471345_34487434_34487573_34509856_34509955_34513434
ENSMUSG00000038696.15_34509894_34514690_1	chr2	+	1317	2	ISM	ENSMUSG00000038696.15	ENSMUST00000113126.3	3018	11	187857	272	187857	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCTCAGAGTCAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	34509893	34514690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_34509955_34513434
ENSMUSG00000038708.11_118335519_118356205_1	chr9	+	325	3	ISM	ENSMUSG00000038708.11	ENST00000444882.5	1388	4	205	55385	184	-55382	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAGTCCTTGAACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	118335518	118356205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_118335626_118343247_118343338_118356077
ENSMUSG00000038708.11_118356209_118410991_1	chr9	+	256	2	ISM	ENSMUSG00000038708.11	ENST00000444882.5	1388	4	20895	599	20874	-596	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGGCTTTTAGAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	118356208	118410991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_118356390_118410916
ENSMUSG00000038712.17_95190399_95195147_1	chr3	+	730	2	ISM	ENSMUSG00000038712.17	ENSMUST00000039537.14	2800	10	144	8330	19	-8321	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTCAGTGACCTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	95190398	95195147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95190937_95194955
ENSMUSG00000038712.17_95190399_95203472_1	chr3	+	2075	10	NNC	ENSMUSG00000038712.17	novel	2096	10	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTTGCGTTCCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	95190398	95203472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_95190937_95195552_95195712_95198338_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
ENSMUSG00000038712.17_95190399_95203472_2	chr3	+	2079	10	NNC	ENSMUSG00000038712.17	novel	2096	10	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	731	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTTGCGTTCCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	95190398	95203472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_95190937_95195552_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200937_95201079_95202105_95202298_95202583_95202737_95202961
ENSMUSG00000038712.17_95190399_95203472_3	chr3	+	2080	10	NNC	ENSMUSG00000038712.17	novel	2096	10	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTTGCGTTCCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	95190398	95203472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_95190937_95195552_95195712_95198332_95198391_95198790_95198856_95199436_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
ENSMUSG00000038712.17_95190399_95203472_4	chr3	+	2076	10	NNC	ENSMUSG00000038712.17	novel	2096	10	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTTGCGTTCCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	95190398	95203472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_95190937_95195552_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202966
ENSMUSG00000038712.17_95190399_95203472_5	chr3	+	2081	10	FSM	ENSMUSG00000038712.17	ENST00000312210.9	2096	10	19	-4	19	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTTGCGTTCCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	95190398	95203472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95190937_95195552_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
ENSMUSG00000038712.17_95190526_95195271_1	chr3	+	727	2	ISM	ENSMUSG00000038712.17	ENSMUST00000039537.14	2800	10	271	8206	146	-8197	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGAGAACCCAGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	95190525	95195271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95190937_95194955
ENSMUSG00000038712.17_95195149_95199467_1	chr3	+	718	4	ISM	ENSMUSG00000038712.17	ENSMUST00000168223.2	1812	9	-110	4007	-110	-4001	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCCACAGGTCTGGACG	NA	NA	NA	NA	NA	NA	NA	NA	95195148	95199467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95195712_95198332_95198391_95198790_95198856_95199435
ENSMUSG00000038712.17_95195259_95199962_1	chr3	+	762	5	ISM	ENSMUSG00000038712.17	ENSMUST00000168223.2	1812	9	0	3512	0	-3506	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAGTTACAACCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	95195258	95199962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935
ENSMUSG00000038712.17_95195259_95200006_1	chr3	+	806	5	ISM	ENSMUSG00000038712.17	ENSMUST00000168223.2	1812	9	0	3468	0	-3462	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTAGTGACTCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	95195258	95200006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935
ENSMUSG00000038712.17_95195402_95200983_1	chr3	+	743	6	ISM	ENSMUSG00000038712.17	ENSMUST00000168223.2	1812	9	143	2491	143	-2485	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGCCTGTGCGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	95195401	95200983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935
ENSMUSG00000038717.10_44824515_44832005_1	chr9	-	502	3	NNC	ENSMUSG00000038717.10	novel	544	3	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGTTGTCTTTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	44832005	44824514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_44824765_44825948_44826110_44831914
ENSMUSG00000038717.10_44824515_44832040_1	chr9	-	538	3	NNC	ENSMUSG00000038717.10	novel	544	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4838	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGTTGTCTTTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	44832040	44824514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_44824765_44825954_44826110_44831907
ENSMUSG00000038722.18_145077206_145081757_1	chr5	+	348	4	ISM	ENSMUSG00000038722.18	ENSMUST00000162594.8	867	6	34	3131	-1	-3124	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTCAGGATCCATCACC	NA	NA	NA	NA	NA	NA	NA	NA	145077205	145081757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_145077253_145078114_145078247_145079257_145079378_145081708
ENSMUSG00000038722.18_145078193_145083301_1	chr5	+	346	4	ISM	ENSMUSG00000038722.18	ENSMUST00000160075.2	928	6	968	1580	968	-1580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAGTGGAAGAAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	145078192	145083301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_145078247_145079257_145079378_145081708_145081832_145083252
ENSMUSG00000038732.16_30320666_30408523_1	chr13	+	669	7	ISM	ENSMUSG00000038732.16	ENSMUST00000047311.16	2905	13	194	22177	194	-22177	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTTGCCAGAGCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30320665	30408523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_30320746_30378518_30378665_30379692_30379771_30386307_30386404_30403618_30403675_30406356_30406412_30408365
ENSMUSG00000038732.16_30378598_30410335_1	chr13	+	616	7	ISM	ENSMUSG00000038732.16	ENSMUST00000047311.16	2905	13	58126	20365	58126	-20365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTATTGATGACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	30378597	30410335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_30378665_30379692_30379771_30386307_30386404_30403618_30403675_30406356_30406412_30408365_30408550_30410255
ENSMUSG00000038732.16_30386338_30416050_1	chr13	+	658	6	ISM	ENSMUSG00000038732.16	ENSMUST00000047311.16	2905	13	65866	14650	65866	-14650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGATATTGTGTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	30386337	30416050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_30386404_30403618_30403675_30406356_30406412_30408365_30408550_30410255_30410449_30415946
ENSMUSG00000038732.16_30408476_30425208_1	chr13	+	631	6	ISM	ENSMUSG00000038732.16	ENSMUST00000047311.16	2905	13	88004	5492	88004	-5492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACCTGGGCTGTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	30408475	30425208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_30408550_30410255_30410449_30415946_30416051_30419672_30419738_30421945_30422079_30425146
ENSMUSG00000038732.16_30410350_30429402_1	chr13	+	624	6	ISM	ENSMUSG00000038732.16	ENSMUST00000047311.16	2905	13	89878	1298	89878	-1298	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAAGGCAGTCTCGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	30410349	30429402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_30410449_30415946_30416051_30419672_30419738_30421945_30422079_30425146_30425299_30429331
ENSMUSG00000038732.16_30425251_30429914_1	chr13	+	631	2	ISM	ENSMUSG00000038732.16	ENSMUST00000047311.16	2905	13	104779	786	104779	-786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGAAGGGAAGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	30425250	30429914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_30425299_30429331
ENSMUSG00000038733.15_181004796_181010442_1	chr1	-	710	2	ISM	ENSMUSG00000038733.15	ENST00000678555.1	2931	13	29104	72	29101	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAAAGCACTCTCAATAT	NA	NA	NA	NA	NA	NA	NA	NA	181010442	181004795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_181005397_181010333
ENSMUSG00000038733.15_181004943_181011847_1	chr1	-	695	4	ISM	ENSMUSG00000038733.15	ENST00000678555.1	2931	13	27699	219	27696	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATACATTGGACAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	181011847	181004942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_181005397_181010333_181010464_181011291_181011371_181011815
ENSMUSG00000038733.15_181005240_181015273_1	chr1	-	735	6	ISM	ENSMUSG00000038733.15	ENST00000678555.1	2931	13	24273	516	24270	-516	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTGAAGCCCGATTGG	NA	NA	NA	NA	NA	NA	NA	NA	181015273	181005239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_181005397_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170
ENSMUSG00000038733.15_181010381_181019438_1	chr1	-	682	6	ISM	ENSMUSG00000038733.15	ENST00000678555.1	2931	13	20108	5657	20105	-5657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTGGAGGCCATAATG	NA	NA	NA	NA	NA	NA	NA	NA	181019438	181010380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325
ENSMUSG00000038733.15_181011332_181025238_1	chr1	-	684	6	ISM	ENSMUSG00000038733.15	ENST00000678555.1	2931	13	14308	6608	14305	-6608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAATGGCCGATTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	181025238	181011331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139
ENSMUSG00000038733.15_181013555_181030662_1	chr1	-	687	6	ISM	ENSMUSG00000038733.15	ENST00000678555.1	2931	13	8884	8831	8881	-8831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTGTGACGGGAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	181030662	181013554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588
ENSMUSG00000038733.15_181015207_181036633_1	chr1	-	702	6	ISM	ENSMUSG00000038733.15	ENST00000678555.1	2931	13	2913	10483	2910	-10483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGACTGCTCTGAGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	181036633	181015206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567
ENSMUSG00000038733.15_181019370_181036877_1	chr1	-	692	6	ISM	ENSMUSG00000038733.15	ENST00000678555.1	2931	13	2669	14646	2666	-14646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGATCAAAGGATACCACA	NA	NA	NA	NA	NA	NA	NA	NA	181036877	181019369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777
ENSMUSG00000038733.15_181025145_181038729_1	chr1	-	681	6	ISM	ENSMUSG00000038733.15	ENST00000678555.1	2931	13	817	20421	814	12985	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAGGTAAGAGAAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	181038729	181025144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
ENSMUSG00000038733.15_181025201_181038790_1	chr1	-	686	6	ISM	ENSMUSG00000038733.15	ENST00000678555.1	2931	13	756	20477	753	12929	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACCAAACTTGACAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	181038790	181025200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
ENSMUSG00000038733.15_181026457_181038991_1	chr1	-	746	5	ISM	ENSMUSG00000038733.15	ENST00000678555.1	2931	13	555	21733	552	11673	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGGCACAGCGTCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	181038991	181026456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
ENSMUSG00000038733.15_181036862_181039342_1	chr1	-	718	2	ISM	ENSMUSG00000038733.15	ENST00000678555.1	2931	13	204	32138	201	1268	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGCAAGAGTCAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	181039342	181036861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_181036878_181038640
ENSMUSG00000038736.11_44239467_44251967_1	chr15	-	879	3	ISM	ENSMUSG00000038736.11	ENSMUST00000038719.8	2600	10	39736	0	39302	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCATTGTTTAGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	44251967	44239466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_44240083_44243455_44243616_44251864
ENSMUSG00000038736.11_44239950_44264793_1	chr15	-	888	6	ISM	ENSMUSG00000038736.11	ENSMUST00000227843.2	5077	10	26476	3391	26476	-483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAGGAAGGAAGGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	44264793	44239949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263624_44264677
ENSMUSG00000038736.11_44239986_44264860_1	chr15	-	919	6	ISM	ENSMUSG00000038736.11	ENSMUST00000227843.2	5077	10	26409	3427	26409	-519	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCGGCAGCCCACCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	44264860	44239985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263624_44264677
ENSMUSG00000038736.11_44243521_44268862_1	chr15	-	875	6	ISM	ENSMUSG00000038736.11	ENSMUST00000227843.2	5077	10	22407	6962	22407	-4054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCAACCACACTGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	44268862	44243520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_44243616_44251864_44251991_44259906_44260052_44263415_44263624_44264677_44264861_44268744
ENSMUSG00000038736.11_44263548_44269294_1	chr15	-	529	4	ISM	ENSMUSG00000038736.11	ENSMUST00000227843.2	5077	10	21975	26989	21975	-24081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGATATTCAAATACAAT	NA	NA	NA	NA	NA	NA	NA	NA	44269294	44263547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_44263624_44264677_44264861_44268744_44268926_44269205
ENSMUSG00000038738.16_43962131_44003101_1	chr7	+	4768	21	ISM	ENSMUSG00000038738.16	ENST00000359082.3	6453	22	0	3660	0	-3660	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTACCCGCAGCCCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	43962130	44003101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_43962386_43962542_43962747_43963175_43963248_43965456_43965566_43965767_43965920_43968500_43968669_43969066_43969184_43974748_43974827_43975061_43975129_43975379_43975711_43976456_43976651_43982715_43982830_43982966_43983043_43991521_43991605_43991843_43991969_43992468_43992605_43993081_43993163_43993929_43993999_43994322_43994442_44000371_44000469_44000980
ENSMUSG00000038738.16_43962334_44003251_1	chr7	+	4715	21	ISM	ENSMUSG00000038738.16	ENST00000359082.3	6453	22	203	3510	203	-3510	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCCCGGCAGCTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	43962333	44003251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_43962386_43962542_43962747_43963175_43963248_43965456_43965566_43965767_43965920_43968500_43968669_43969066_43969184_43974748_43974827_43975061_43975129_43975379_43975711_43976456_43976651_43982715_43982830_43982966_43983043_43991521_43991605_43991843_43991969_43992468_43992605_43993081_43993163_43993929_43993999_43994322_43994442_44000371_44000469_44000980
ENSMUSG00000038738.16_43962592_44003374_1	chr7	+	4737	20	ISM	ENSMUSG00000038738.16	ENST00000359082.3	6453	22	461	3387	461	-3387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGCATCCACACTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	43962591	44003374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_43962747_43963175_43963248_43965456_43965566_43965767_43965920_43968500_43968669_43969066_43969184_43974748_43974827_43975061_43975129_43975379_43975711_43976456_43976651_43982715_43982830_43982966_43983043_43991521_43991605_43991843_43991969_43992468_43992605_43993081_43993163_43993929_43993999_43994322_43994442_44000371_44000469_44000980
ENSMUSG00000038738.16_43962650_44003421_1	chr7	+	4726	20	ISM	ENSMUSG00000038738.16	ENST00000359082.3	6453	22	519	3340	519	-3340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGGGGCGTGGCTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	43962649	44003421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_43962747_43963175_43963248_43965456_43965566_43965767_43965920_43968500_43968669_43969066_43969184_43974748_43974827_43975061_43975129_43975379_43975711_43976456_43976651_43982715_43982830_43982966_43983043_43991521_43991605_43991843_43991969_43992468_43992605_43993081_43993163_43993929_43993999_43994322_43994442_44000371_44000469_44000980
ENSMUSG00000038738.16_43963204_44003545_1	chr7	+	4725	19	ISM	ENSMUSG00000038738.16	ENST00000359082.3	6453	22	1073	3216	1073	-3216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCTCATGACTCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	43963203	44003545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_43963248_43965456_43965566_43965767_43965920_43968500_43968669_43969066_43969184_43974748_43974827_43975061_43975129_43975379_43975711_43976456_43976651_43982715_43982830_43982966_43983043_43991521_43991605_43991843_43991969_43992468_43992605_43993081_43993163_43993929_43993999_43994322_43994442_44000371_44000469_44000980
ENSMUSG00000038738.16_43965794_44003732_1	chr7	+	4733	17	ISM	ENSMUSG00000038738.16	ENST00000359082.3	6453	22	3663	3029	3663	-3029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGGGGGTCCCGTGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	43965793	44003732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_43965920_43968500_43968669_43969066_43969184_43974748_43974827_43975061_43975129_43975379_43975711_43976456_43976651_43982715_43982830_43982966_43983043_43991521_43991605_43991843_43991969_43992468_43992605_43993081_43993163_43993929_43993999_43994322_43994442_44000371_44000469_44000980
ENSMUSG00000038738.16_43968586_44003929_1	chr7	+	4719	16	ISM	ENSMUSG00000038738.16	ENST00000359082.3	6453	22	6455	2832	6455	-2832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCAGCAGTTTGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	43968585	44003929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_43968669_43969066_43969184_43974748_43974827_43975061_43975129_43975379_43975711_43976456_43976651_43982715_43982830_43982966_43983043_43991521_43991605_43991843_43991969_43992468_43992605_43993081_43993163_43993929_43993999_43994322_43994442_44000371_44000469_44000980
ENSMUSG00000038738.16_43974747_44006152_1	chr7	+	4769	15	ISM	ENSMUSG00000038738.16	ENST00000359082.3	6453	22	12616	609	12616	-609	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAACAGCTGCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	43974746	44006152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_43974827_43975061_43975129_43975379_43975711_43976456_43976651_43982715_43982830_43982966_43983043_43991521_43991605_43991843_43991969_43992468_43992605_43993081_43993163_43993929_43993999_43994322_43994442_44000371_44000469_44000980_44004069_44006043
ENSMUSG00000038738.16_43975432_44006310_1	chr7	+	4728	13	ISM	ENSMUSG00000038738.16	ENST00000359082.3	6453	22	13301	451	13301	-451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCGCCCAGGCCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	43975431	44006310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_43975711_43976456_43976651_43982715_43982830_43982966_43983043_43991521_43991605_43991843_43991969_43992468_43992605_43993081_43993163_43993929_43993999_43994322_43994442_44000371_44000469_44000980_44004069_44006043
ENSMUSG00000038738.16_43975518_44006391_1	chr7	+	4723	13	ISM	ENSMUSG00000038738.16	ENST00000359082.3	6453	22	13387	370	13387	-370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGGAGGGGCAGGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	43975517	44006391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_43975711_43976456_43976651_43982715_43982830_43982966_43983043_43991521_43991605_43991843_43991969_43992468_43992605_43993081_43993163_43993929_43993999_43994322_43994442_44000371_44000469_44000980_44004069_44006043
ENSMUSG00000038738.16_43976537_44006761_1	chr7	+	4820	12	ISM	ENSMUSG00000038738.16	ENST00000359082.3	6453	22	14406	0	14406	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGCCTGGACGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	43976536	44006761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_43976651_43982715_43982830_43982966_43983043_43991521_43991605_43991843_43991969_43992468_43992605_43993081_43993163_43993929_43993999_43994322_43994442_44000371_44000469_44000980_44004069_44006043
ENSMUSG00000038742.8_20786612_20789698_1	chr9	-	841	4	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1325	1508	1325	-1508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCCACTACGACAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	20789698	20786611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_20786733_20786809_20786998_20787687_20787866_20789344
ENSMUSG00000038742.8_20786684_20789764_1	chr9	-	835	4	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1259	1580	1259	-1580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATCAGGTGACAAGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	20789764	20786683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_20786733_20786809_20786998_20787687_20787866_20789344
ENSMUSG00000038751.6_180837552_180844168_1	chr2	-	1115	7	FSM	ENSMUSG00000038751.6	ENST00000217185.3	1247	7	132	0	132	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGGCCAGGACCCACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	180844168	180837551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_180837750_180838093_180838248_180838737_180838920_180840172_180840335_180840869_180841024_180841391_180841556_180844067
ENSMUSG00000038759.16_35166138_35176880_1	chr6	+	1127	8	NNC	ENSMUSG00000038759.16	novel	6411	43	NA	NA	11574	-47645	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCAAGTGCAGACAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35166137	35176880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_35166197_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788
ENSMUSG00000038759.16_35166913_35178977_1	chr6	+	1116	8	ISM	ENSMUSG00000038759.16	ENST00000285968.11	6255	43	12368	45561	12349	-45548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGGCTCCTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	35166912	35178977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920
ENSMUSG00000038759.16_35166964_35179045_1	chr6	+	1133	8	ISM	ENSMUSG00000038759.16	ENST00000285968.11	6255	43	12419	45493	12400	-45480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGAAAGTCTCCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	35166963	35179045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920
ENSMUSG00000038759.16_35171403_35182438_1	chr6	+	1138	8	ISM	ENSMUSG00000038759.16	ENST00000285968.11	6255	43	16858	42100	16839	-42087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGAGCTTACCGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	35171402	35182438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259
ENSMUSG00000038759.16_35173688_35185824_1	chr6	+	1100	8	ISM	ENSMUSG00000038759.16	ENST00000285968.11	6255	43	19143	38714	19124	-38701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGGAGTTAAGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	35173687	35185824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729
ENSMUSG00000038759.16_35175805_35187884_1	chr6	+	1127	8	ISM	ENSMUSG00000038759.16	ENST00000285968.11	6255	43	21260	36654	21241	-36641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAACAGCTCTTGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	35175804	35187884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762
ENSMUSG00000038759.16_35176828_35189743_1	chr6	+	1121	8	ISM	ENSMUSG00000038759.16	ENST00000285968.11	6255	43	22283	34795	22264	-34782	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAGGTCAAAATGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	35176827	35189743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661
ENSMUSG00000038759.16_35185042_35200557_1	chr6	+	1120	9	ISM	ENSMUSG00000038759.16	ENST00000285968.11	6255	43	30497	23981	30478	-23968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTTACTGGATGACAT	NA	NA	NA	NA	NA	NA	NA	NA	35185041	35200557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447
ENSMUSG00000038759.16_35185812_35201564_1	chr6	+	1184	10	ISM	ENSMUSG00000038759.16	ENST00000285968.11	6255	43	31267	22974	31248	-22961	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACTGTGAGCACAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	35185811	35201564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456
ENSMUSG00000038759.16_35191614_35204371_1	chr6	+	1159	9	ISM	ENSMUSG00000038759.16	ENST00000285968.11	6255	43	37069	20167	37050	-20154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTCATGCTTGATA	NA	NA	NA	NA	NA	NA	NA	NA	35191613	35204371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237
ENSMUSG00000038759.16_35204262_35215921_1	chr6	+	1114	8	ISM	ENSMUSG00000038759.16	ENST00000285968.11	6255	43	49717	8617	49698	-8604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGAGCTCCATGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	35204261	35215921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879
ENSMUSG00000038759.16_35207439_35220811_1	chr6	+	1123	9	ISM	ENSMUSG00000038759.16	ENST00000285968.11	6255	43	52894	3727	52875	-3714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTGAAGCAGAGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	35207438	35220811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753
ENSMUSG00000038759.16_35210270_35222311_1	chr6	+	1145	9	ISM	ENSMUSG00000038759.16	ENST00000285968.11	6255	43	55725	2227	55706	-2214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCTGGTCTCAAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	35210269	35222311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182
ENSMUSG00000038759.16_35215908_35224525_1	chr6	+	1133	8	ISM	ENSMUSG00000038759.16	ENST00000285968.11	6255	43	61363	13	61344	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	35215907	35224525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222940_35223016_35224195
ENSMUSG00000038762.16_36267711_36269080_1	chr17	-	1025	4	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	11573	0	11573	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGGGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	36269080	36267710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964
ENSMUSG00000038762.16_36268023_36270169_1	chr17	-	919	7	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	10484	312	10484	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCTCTTCAGAAAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	36270169	36268022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120
ENSMUSG00000038762.16_36268179_36270423_1	chr17	-	888	7	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	10230	-468	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGGCTGCTGCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	36270423	36268178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269924_36270032_36270120_36270196_36270327
ENSMUSG00000038762.16_36268179_36270506_1	chr17	-	968	8	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	10147	468	10147	-468	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGGCTGCTGCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	36270506	36268178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327
ENSMUSG00000038762.16_36268358_36270793_1	chr17	-	929	9	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	9860	647	9860	-647	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCCCTGGGTGAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	36270793	36268357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759
ENSMUSG00000038762.16_36268424_36270850_1	chr17	-	920	9	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	9803	713	9803	-713	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTGGAGGAGCAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	36270850	36268423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759
ENSMUSG00000038762.16_36268571_36271089_1	chr17	-	980	9	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	9564	860	9564	-860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGCTCAGACAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	36271089	36268570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005
ENSMUSG00000038762.16_36268754_36271507_1	chr17	-	922	9	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	9146	1043	9146	-1043	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGATGTCCTCATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	36271507	36268753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472
ENSMUSG00000038762.16_36268963_36271724_1	chr17	-	1011	9	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	8929	1252	8929	-1252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCATTCTGGGGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	36271724	36268962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706
ENSMUSG00000038762.16_36269109_36271780_1	chr17	-	921	9	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	8873	1398	8873	-1398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCAGAGCAGCTGCACATG	NA	NA	NA	NA	NA	NA	NA	NA	36271780	36269108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706
ENSMUSG00000038762.16_36270143_36272034_1	chr17	-	936	7	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	8619	2432	8619	-2432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCGACATGGACTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	36272034	36270142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934
ENSMUSG00000038762.16_36270406_36272715_1	chr17	-	1015	7	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	7938	2695	7938	-2695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTCCCAAGGAGTACACC	NA	NA	NA	NA	NA	NA	NA	NA	36272715	36270405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592
ENSMUSG00000038762.16_36270760_36274128_1	chr17	-	1018	8	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	6525	3049	6525	-3049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCATGCTCTTTTACGG	NA	NA	NA	NA	NA	NA	NA	NA	36274128	36270759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017
ENSMUSG00000038762.16_36271006_36274284_1	chr17	-	965	8	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	6369	3295	6369	-3295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGCTGCCCGTGGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	36274284	36271005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212
ENSMUSG00000038762.16_36271551_36274687_1	chr17	-	952	9	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	5966	3840	5966	-3840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTCGACCCTGAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	36274687	36271550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649
ENSMUSG00000038762.16_36271935_36276015_1	chr17	-	1005	10	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	4638	4224	4638	-4224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCTGGGGAGTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	36276015	36271934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968
ENSMUSG00000038762.16_36272084_36280653_1	chr17	-	972	11	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	0	4373	0	-4373	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGTCAATGCTGACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	36280653	36272083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ENSMUSG00000038765.15_33455137_33457229_1	chr2	-	316	4	ISM	ENSMUSG00000038765.15	ENSMUST00000239476.2	1219	8	73294	589	73294	-589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGACCCCTTCCAACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	33457229	33455136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_33455238_33456682_33456750_33456896_33456975_33457159
ENSMUSG00000038765.15_33456893_33459124_1	chr2	-	327	3	ISM	ENSMUSG00000038765.15	ENSMUST00000239476.2	1219	8	71399	2345	71399	-2345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTCACGACTAATCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	33459124	33456892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_33456975_33457159_33457342_33459061
ENSMUSG00000038765.15_33457319_33529563_1	chr2	-	319	3	ISM	ENSMUSG00000038765.15	ENSMUST00000239476.2	1219	8	960	2771	960	-2771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGAAGCCGGCCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	33529563	33457318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_33457342_33459061_33459295_33529500
ENSMUSG00000038765.15_33459117_33529610_1	chr2	-	288	2	ISM	ENSMUSG00000038765.15	ENSMUST00000239476.2	1219	8	913	4569	913	-4569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAGAAGGAGAAAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	33529610	33459116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_33459295_33529500
ENSMUSG00000038765.15_33459230_33530527_1	chr2	-	326	3	ISM	ENSMUSG00000038765.15	ENSMUST00000239476.2	1219	8	-4	4682	-4	-4682	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGGAGTGTGTGTACCAC	NA	NA	NA	NA	NA	NA	NA	NA	33530527	33459229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_33459295_33529500_33529688_33530453
ENSMUSG00000038765.15_33529599_33530679_1	chr2	-	315	2	ISM	ENSMUSG00000038765.15	ENSMUST00000239476.2	1219	8	-156	75051	-59	-75051	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGGAGTGTTTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	33530679	33529598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_33529688_33530453
ENSMUSG00000038775.15_118892369_118900394_1	chr9	+	1661	11	ISM	ENSMUSG00000038775.15	ENSMUST00000051386.13	2909	20	10523	193	32	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	118892368	118900394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899345_118899418_118899624_118899883_118900201
ENSMUSG00000038775.15_118892369_118900394_2	chr9	+	1648	11	NNC	ENSMUSG00000038775.15	novel	1609	11	NA	NA	32	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	118892368	118900394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899350_118899418_118899624_118899875_118900201
ENSMUSG00000038775.15_118892369_118900394_3	chr9	+	1656	11	FSM	ENSMUSG00000038775.15	ENST00000465644.5	1609	11	32	-79	32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	118892368	118900394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899350_118899418_118899624_118899883_118900201
ENSMUSG00000038775.15_118892369_118900394_4	chr9	+	1652	11	NNC	ENSMUSG00000038775.15	novel	1609	11	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	118892368	118900394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899350_118899418_118899628_118899883_118900201
ENSMUSG00000038775.15_118892369_118900394_5	chr9	+	1660	11	NNC	ENSMUSG00000038775.15	novel	1609	11	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	118892368	118900394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899350_118899422_118899624_118899883_118900201
ENSMUSG00000038775.15_118892369_118900394_6	chr9	+	1650	11	NNC	ENSMUSG00000038775.15	novel	1609	11	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	118892368	118900394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_118892452_118892669_118892765_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899350_118899418_118899624_118899883_118900201
ENSMUSG00000038775.15_118892369_118900394_7	chr9	+	1655	11	NNC	ENSMUSG00000038775.15	novel	1609	11	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	118892368	118900394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899351_118899418_118899624_118899883_118900201
ENSMUSG00000038775.15_118892369_118900394_8	chr9	+	1646	11	NNC	ENSMUSG00000038775.15	novel	1609	11	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	118892368	118900394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895778_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899350_118899418_118899624_118899883_118900201
ENSMUSG00000038776.14_180821601_180822260_1	chr1	-	120	2	ISM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	22874	4482	22874	-4482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGACCCCTCTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	180822260	180821600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180821653_180822192
ENSMUSG00000038781.8_56304077_56307929_1	chr17	-	1030	9	ISM	ENSMUSG00000038781.8	ENSMUST00000043785.8	1509	13	4655	0	4655	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGTGGCTGTAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	56307929	56304076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56304362_56304459_56304535_56304604_56304698_56304777_56304952_56306742_56306809_56306912_56307016_56307086_56307157_56307479_56307615_56307900
ENSMUSG00000038781.8_56304208_56307978_1	chr17	-	948	9	ISM	ENSMUSG00000038781.8	ENSMUST00000043785.8	1509	13	4606	131	4606	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCTCCCTCAAGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	56307978	56304207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56304362_56304459_56304535_56304604_56304698_56304777_56304952_56306742_56306809_56306912_56307016_56307086_56307157_56307479_56307615_56307900
ENSMUSG00000038781.8_56304495_56309975_1	chr17	-	962	10	ISM	ENSMUSG00000038781.8	ENSMUST00000043785.8	1509	13	2609	418	2609	-418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGCTCGTCCCAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	56309975	56304494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56304535_56304604_56304698_56304777_56304952_56306742_56306809_56306912_56307016_56307086_56307157_56307479_56307615_56307900_56308002_56309011_56309069_56309852
ENSMUSG00000038781.8_56304605_56310201_1	chr17	-	994	10	ISM	ENSMUSG00000038781.8	ENSMUST00000043785.8	1509	13	2383	528	2383	-528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGCTCTAGTCTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	56310201	56304604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56304698_56304777_56304952_56306742_56306809_56306912_56307016_56307086_56307157_56307479_56307615_56307900_56308002_56309011_56309069_56309852_56309976_56310129
ENSMUSG00000038781.8_56304778_56312552_1	chr17	-	1024	10	ISM	ENSMUSG00000038781.8	ENSMUST00000043785.8	1509	13	32	701	32	-701	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCCAGGTTGGGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	56312552	56304777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56304952_56306742_56306809_56306912_56307016_56307086_56307157_56307479_56307615_56307900_56308002_56309011_56309069_56309852_56309976_56310129_56310202_56312429
ENSMUSG00000038784.14_35022862_35029885_1	chr6	-	1039	3	ISM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	80774	931	80675	-931	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAGTAATGGTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	35029885	35022861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_35023294_35027996_35028495_35029776
ENSMUSG00000038797.14_80513012_80526137_1	chr7	+	1859	2	FSM	ENSMUSG00000038797.14	ENST00000327179.6	1945	2	91	-5	91	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGAAGTGCTGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	80513011	80526137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_80513417_80524683
ENSMUSG00000038797.14_80513141_80526137_1	chr7	+	1730	2	FSM	ENSMUSG00000038797.14	ENST00000327179.6	1945	2	220	-5	220	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGAAGTGCTGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	80513140	80526137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_80513417_80524683
ENSMUSG00000038803.8_31063229_31065132_1	chr5	-	1136	3	NNC	ENSMUSG00000038803.8	novel	1144	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAAGTGCATTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	31065132	31063228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_31064103_31064742_31064881_31065008
ENSMUSG00000038803.8_31063229_31065132_2	chr5	-	1139	3	NNC	ENSMUSG00000038803.8	novel	1144	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAAGTGCATTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	31065132	31063228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_31064111_31064742_31064881_31065013
ENSMUSG00000038806.8_180678692_180694270_1	chr1	+	1805	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	0	1408	0	-1408	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATAACATTCATTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	180678691	180694270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
ENSMUSG00000038806.8_180683365_180694433_1	chr1	+	1805	6	ISM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	4673	1245	4673	-1245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTGGTTTTCAAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	180683364	180694433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
ENSMUSG00000038806.8_180687494_180694644_1	chr1	+	1755	4	ISM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	8802	1034	8802	-1034	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATTGATAGTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	180687493	180694644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180687636_180688662_180688784_180689922_180690407_180693636
ENSMUSG00000038806.8_180687554_180694700_1	chr1	+	1751	4	ISM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	8862	978	8862	-978	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGACTGACCCAGGATAG	NA	NA	NA	NA	NA	NA	NA	NA	180687553	180694700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180687636_180688662_180688784_180689922_180690407_180693636
ENSMUSG00000038806.8_180688754_180694868_1	chr1	+	1746	3	ISM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	10062	810	10062	-810	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAAATCTCAATTAGG	NA	NA	NA	NA	NA	NA	NA	NA	180688753	180694868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180688784_180689922_180690407_180693636
ENSMUSG00000038806.8_180690032_180694996_1	chr1	+	1735	2	ISM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	11340	682	11340	-682	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGCACTGACTGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	180690031	180694996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180690407_180693636
ENSMUSG00000038806.8_180690084_180695046_1	chr1	+	1733	2	ISM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	11392	632	11392	-632	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATAATGGCTCACAACCA	NA	NA	NA	NA	NA	NA	NA	NA	180690083	180695046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_180690407_180693636
ENSMUSG00000038811.14_95735909_95736820_1	chr11	+	498	3	FSM	ENSMUSG00000038811.14	ENST00000300406.6	544	3	47	-1	47	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCCCACACCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	95735908	95736820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_95735967_95736308_95736689_95736760
ENSMUSG00000038811.14_95735909_95736820_2	chr11	+	497	3	NNC	ENSMUSG00000038811.14	novel	544	3	NA	NA	47	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	4477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCCCACACCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	95735908	95736820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_95735967_95736308_95736689_95736761
ENSMUSG00000038812.17_6887115_6887980_1	chr19	+	549	4	ISM	ENSMUSG00000038812.17	ENSMUST00000088257.14	957	5	49	437	0	-416	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGAAGGCTATGAGCACG	NA	NA	NA	NA	NA	NA	NA	NA	6887114	6887980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6887224_6887321_6887631_6887730_6887833_6887951
ENSMUSG00000038812.17_6887320_6888202_1	chr19	+	586	4	FSM	ENSMUSG00000038812.17	ENSMUST00000116551.10	985	4	205	194	205	-194	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGATGAGGAGACTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	6887319	6888202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6887631_6887730_6887833_6887951_6888042_6888119
ENSMUSG00000038812.17_6887320_6888396_1	chr19	+	770	4	NNC	ENSMUSG00000038812.17	novel	985	4	NA	NA	205	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	6887319	6888396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_6887631_6887730_6887833_6887951_6888032_6888119
ENSMUSG00000038812.17_6887320_6888396_3	chr19	+	780	4	FSM	ENSMUSG00000038812.17	ENSMUST00000116551.10	985	4	205	0	205	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	6887319	6888396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6887631_6887730_6887833_6887951_6888042_6888119
ENSMUSG00000038812.17_6887521_6888396_1	chr19	+	579	4	FSM	ENSMUSG00000038812.17	ENSMUST00000116551.10	985	4	406	0	-11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	6887520	6888396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6887631_6887730_6887833_6887951_6888042_6888119
ENSMUSG00000038816.15_56812537_56817095_1	chr4	-	385	5	ISM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	48093	1602	48059	-1602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTGCTATAAACTACTG	NA	NA	NA	NA	NA	NA	NA	NA	56817095	56812536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988
ENSMUSG00000038816.15_56837843_56844547_1	chr4	-	371	4	ISM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	20641	26908	20607	2903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATGAGAGTGGCCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	56844547	56837842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_56837903_56838965_56839056_56841560_56841681_56844446
ENSMUSG00000038822.16_45453925_45547622_1	chr10	+	1812	14	ISM	ENSMUSG00000038822.16	ENST00000369125.6	3073	19	12	40740	0	-40740	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAGACTTTATTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	45453924	45547622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534
ENSMUSG00000038822.16_45454084_45576771_1	chr10	+	1884	16	ISM	ENSMUSG00000038822.16	ENST00000369125.6	3073	19	171	11591	159	-11591	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1044	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAATCTCTCTGGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	45454083	45576771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45562697_45562830_45576672
ENSMUSG00000038822.16_45454237_45577120_1	chr10	+	1802	17	ISM	ENSMUSG00000038822.16	ENST00000369125.6	3073	19	324	11242	312	-11242	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1043	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAGAGCTTTTATGAT	NA	NA	NA	NA	NA	NA	NA	NA	45454236	45577120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45562697_45562830_45576672_45576772_45577049
ENSMUSG00000038822.16_45465575_45586090_1	chr10	+	1853	16	ISM	ENSMUSG00000038822.16	ENST00000369125.6	3073	19	11662	2272	11650	-2272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTAAACTAGCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	45465574	45586090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45562697_45562830_45576672_45576772_45577049_45577121_45585976
ENSMUSG00000038822.16_45466411_45587595_1	chr10	+	1780	16	ISM	ENSMUSG00000038822.16	ENST00000369125.6	3073	19	12498	767	12486	-767	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	957	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCATTGTGGCAGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	45466410	45587595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ENSMUSG00000038822.16_45466452_45587658_1	chr10	+	1802	16	ISM	ENSMUSG00000038822.16	ENST00000369125.6	3073	19	12539	704	12527	-704	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGCACAATCCAGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	45466451	45587658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ENSMUSG00000038822.16_45514435_45587879_1	chr10	+	1780	13	ISM	ENSMUSG00000038822.16	ENST00000369125.6	3073	19	60522	483	60510	-483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	983	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTTTTAGGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	45514434	45587879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ENSMUSG00000038822.16_45514447_45587883_1	chr10	+	1770	13	NNC	ENSMUSG00000038822.16	novel	3073	19	NA	NA	60522	-479	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	856	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAGGTTTCTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	45514446	45587883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45562697_45562830_45576672_45576772_45577051_45577121_45585976_45586091_45587529
ENSMUSG00000038822.16_45524720_45587980_1	chr10	+	1783	12	ISM	ENSMUSG00000038822.16	ENST00000369125.6	3073	19	70807	382	70795	-382	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1092	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGTAAATTATATGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	45524719	45587980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ENSMUSG00000038822.16_45524759_45588049_1	chr10	+	1813	12	ISM	ENSMUSG00000038822.16	ENST00000369125.6	3073	19	70846	313	70834	-313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGTAAAGAATGGATT	NA	NA	NA	NA	NA	NA	NA	NA	45524758	45588049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ENSMUSG00000038822.16_45528682_45588255_1	chr10	+	1787	9	ISM	ENSMUSG00000038822.16	ENST00000369125.6	3073	19	74769	107	74757	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1008	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGCATCTTTCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	45528681	45588255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ENSMUSG00000038822.16_45528682_45588367_1	chr10	+	1899	9	ISM	ENSMUSG00000038822.16	ENST00000369125.6	3073	19	74769	-5	74757	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1054	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCTTTATTTGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	45528681	45588367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ENSMUSG00000038828.14_31025356_31028030_1	chr5	+	1905	2	ISM	ENSMUSG00000038828.14	ENSMUST00000114716.4	2220	16	-1619	6358	0	-6358	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAACCGATAAACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	31025355	31028030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31027163_31027932
ENSMUSG00000038828.14_31025562_31028829_1	chr5	+	1867	3	ISM	ENSMUSG00000038828.14	ENSMUST00000114716.4	2220	16	-1413	5559	206	-5559	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCTGAAGGACCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	31025561	31028829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31027163_31027932_31028133_31028763
ENSMUSG00000038828.14_31025614_31028875_1	chr5	+	1861	3	ISM	ENSMUSG00000038828.14	ENSMUST00000114716.4	2220	16	-1361	5513	258	-5513	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACGGATGGAGCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	31025613	31028875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31027163_31027932_31028133_31028763
ENSMUSG00000038828.14_31025728_31029131_1	chr5	+	1853	4	ISM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	372	7393	372	-5257	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTCTGTGGAGCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	31025727	31029131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064
ENSMUSG00000038828.14_31025885_31029871_1	chr5	+	1874	6	ISM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	529	6653	529	-4517	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGACCAGCAAAGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	31025884	31029871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844
ENSMUSG00000038828.14_31025949_31029917_1	chr5	+	1856	6	ISM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	593	6607	593	-4471	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTTTCACCAACCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	31025948	31029917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844
ENSMUSG00000038828.14_31026213_31030938_1	chr5	+	1909	9	ISM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	857	5586	-762	-3450	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGCCACCCCTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	31026212	31030938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838
ENSMUSG00000038828.14_31026352_31031353_1	chr5	+	1866	10	ISM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	996	5171	-623	-3035	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGACAGCTGTACCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	31026351	31031353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299
ENSMUSG00000038828.14_31026855_31033450_1	chr5	+	1839	15	ISM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	1499	3074	-120	-938	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAGCTGGCCTGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	31026854	31033450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390
ENSMUSG00000038828.14_31027078_31033834_1	chr5	+	1853	16	ISM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	1722	2690	103	-554	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCATGAGGCCTGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	31027077	31033834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706
ENSMUSG00000038828.14_31027969_31034119_1	chr5	+	1862	16	ISM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	2613	2405	994	-269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCCCAGCAATAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	31027968	31034119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ENSMUSG00000038828.14_31028035_31034160_1	chr5	+	1837	16	ISM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	2679	2364	1060	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGGCTACCTATCGGA	NA	NA	NA	NA	NA	NA	NA	NA	31028034	31034160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ENSMUSG00000038828.14_31028817_31034388_1	chr5	+	1914	15	ISM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	3461	2136	1842	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCATCACTCAAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	31028816	31034388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ENSMUSG00000038828.14_31029450_31034592_1	chr5	+	1851	13	ISM	ENSMUSG00000038828.14	ENSMUST00000114716.4	2220	16	2475	-204	2475	204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTCAAAACACCCAGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	31029449	31034592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ENSMUSG00000038828.14_31030052_31034807_1	chr5	+	1890	11	ISM	ENSMUSG00000038828.14	ENSMUST00000114716.4	2220	16	3077	-419	3077	419	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGCTTTCCTGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	31030051	31034807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ENSMUSG00000038828.14_31031324_31035168_1	chr5	+	1922	8	ISM	ENSMUSG00000038828.14	ENSMUST00000114716.4	2220	16	4349	-780	4349	780	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTCCTCATTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	31031323	31035168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ENSMUSG00000038828.14_31032249_31035378_1	chr5	+	1847	5	ISM	ENSMUSG00000038828.14	ENSMUST00000114716.4	2220	16	5274	-990	5274	990	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACCATCTTGACCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	31032248	31035378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ENSMUSG00000038828.14_31033153_31035495_1	chr5	+	1881	4	ISM	ENSMUSG00000038828.14	ENSMUST00000114716.4	2220	16	6178	-1107	6178	-1029	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAAAGCTCTGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	31033152	31035495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31033231_31033390_31033560_31033706_31033853_31034007
ENSMUSG00000038828.14_31033484_31035708_1	chr5	+	1923	3	ISM	ENSMUSG00000038828.14	ENSMUST00000114716.4	2220	16	6509	-1320	6509	-816	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATGTGTTTTGCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	31033483	31035708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31033560_31033706_31033853_31034007
ENSMUSG00000038828.14_31033517_31035712_1	chr5	+	1894	3	ISM	ENSMUSG00000038828.14	ENSMUST00000114716.4	2220	16	6542	-1324	6542	-812	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTTGCTAGCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	31033516	31035712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31033560_31033706_31033853_31034007
ENSMUSG00000038828.14_31033819_31035824_1	chr5	+	1851	2	ISM	ENSMUSG00000038828.14	ENSMUST00000114716.4	2220	16	6844	-1436	6844	-700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGCAGAGGCAGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	31033818	31035824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31033853_31034007
ENSMUSG00000038836.16_34757967_34762454_1	chr6	+	537	4	FSM	ENSMUSG00000038836.16	ENSMUST00000115014.8	805	4	143	125	142	-125	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTTTAAAAGTGGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	34757966	34762454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_34757995_34759034_34759154_34760504_34760566_34762125
ENSMUSG00000038836.16_34759102_34762579_1	chr6	+	567	3	ISM	ENSMUSG00000038836.16	ENSMUST00000115014.8	805	4	1278	0	64	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCAGATTATTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	34759101	34762579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_34759154_34760504_34760566_34762125
ENSMUSG00000038836.16_34759102_34823770_1	chr6	+	2180	15	FSM	ENSMUSG00000038836.16	ENST00000436302.6	2384	15	64	140	64	-140	multi-exon	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGAAACGAATTTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	34759101	34823770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_34759154_34760504_34760566_34762125_34762312_34770816_34770925_34775128_34775268_34776067_34776845_34780377_34780547_34789766_34789894_34791318_34791420_34791645_34791759_34799952_34800020_34801666_34801736_34805126_34805185_34809439_34809512_34823689
ENSMUSG00000038836.16_34760504_34823910_1	chr6	+	2269	14	ISM	ENSMUSG00000038836.16	ENST00000436302.6	2384	15	1466	0	1466	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATCAGTAAGTCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	34760503	34823910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_34760566_34762125_34762312_34770816_34770925_34775128_34775268_34776067_34776845_34780377_34780547_34789766_34789894_34791318_34791420_34791645_34791759_34799952_34800020_34801666_34801736_34805126_34805185_34809439_34809512_34823689
ENSMUSG00000038836.16_34762123_34823910_1	chr6	+	2205	13	NNC	ENSMUSG00000038836.16	novel	2384	15	NA	NA	3085	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATCAGTAAGTCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	34762122	34823910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_34762312_34770816_34770925_34775128_34775268_34776072_34776845_34780377_34780547_34789766_34789894_34791318_34791420_34791645_34791759_34799952_34800020_34801666_34801736_34805126_34805185_34809439_34809512_34823689
ENSMUSG00000038838.16_35967635_35973987_1	chr17	-	2003	18	NIC	ENSMUSG00000038838.16	novel	3240	29	NA	NA	4197	-226	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGGGTAAGGCTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	35973987	35967634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_-_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971394_35971611_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895
ENSMUSG00000038838.16_35968128_35975460_1	chr17	-	1955	19	NIC	ENSMUSG00000038838.16	novel	3240	29	NA	NA	2724	-719	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCAGCTCACAAAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	35975460	35968127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_-_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971394_35971611_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387
ENSMUSG00000038838.16_35969147_35976774_1	chr17	-	1975	20	NIC	ENSMUSG00000038838.16	novel	3240	29	NA	NA	1410	-1738	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCCTTGCCCCGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	35976774	35969146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_-_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971394_35971611_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677
ENSMUSG00000038838.16_35969977_35977155_1	chr17	-	2034	21	NIC	ENSMUSG00000038838.16	novel	3240	29	NA	NA	1029	-2568	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCACCCACACCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	35977155	35969976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_-_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971394_35971611_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022
ENSMUSG00000038838.16_35970702_35978083_1	chr17	-	1944	20	ISM	ENSMUSG00000038838.16	ENST00000541562.6	3240	29	101	3293	101	-3293	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCTGCAGGTAAGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	35978083	35970701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35970797_35970893_35971020_35971105_35971177_35971295_35971394_35971611_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ENSMUSG00000038845.12_95557836_95566460_1	chr11	+	518	5	ISM	ENSMUSG00000038845.12	ENST00000355202.9	983	7	-9	4403	1	-4403	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCACAGAGCGAGCGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	95557835	95566460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395
ENSMUSG00000038845.12_95557890_95568955_1	chr11	+	686	6	ISM	ENSMUSG00000038845.12	ENST00000504124.6	1735	7	55	2541	45	-1908	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGTGGTGGAAAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	95557889	95568955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_95557960_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876
ENSMUSG00000038845.12_95558915_95570613_1	chr11	+	675	6	ISM	ENSMUSG00000038845.12	ENST00000504124.6	1735	7	1080	883	1070	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGATCGAGCTGCGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	95558914	95570613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ENSMUSG00000038845.12_95558926_95568925_1	chr11	+	523	5	ISM	ENSMUSG00000038845.12	ENST00000355202.9	983	7	1081	1938	1081	-1938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGCTCAGCAGGAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	95558925	95568925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876
ENSMUSG00000038845.12_95562276_95570599_1	chr11	+	535	5	ISM	ENSMUSG00000038845.12	ENST00000504124.6	1735	7	4441	897	4431	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGCAGGCGACGGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	95562275	95570599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ENSMUSG00000038845.12_95566015_95570723_1	chr11	+	513	4	ISM	ENSMUSG00000038845.12	ENST00000504124.6	1735	7	8180	773	8170	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGTGAGGCCAGCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	95566014	95570723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_95566111_95566395_95566513_95568876_95568973_95570519
ENSMUSG00000038845.12_95566065_95570775_1	chr11	+	515	4	ISM	ENSMUSG00000038845.12	ENST00000504124.6	1735	7	8230	721	8220	-88	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGCCCCACCCCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	95566064	95570775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_95566111_95566395_95566513_95568876_95568973_95570519
ENSMUSG00000038845.12_95566395_95570599_1	chr11	+	276	3	ISM	ENSMUSG00000038845.12	ENST00000355202.9	983	7	8550	264	8550	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGCAGGCGACGGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	95566394	95570599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_95566513_95568876_95568973_95570537
ENSMUSG00000038845.12_95568901_95570754_1	chr11	+	289	2	ISM	ENSMUSG00000038845.12	ENST00000355202.9	983	7	11056	109	11056	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGCTGAATGACGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	95568900	95570754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_95568973_95570537
ENSMUSG00000038859.8_144201336_144294922_1	chr5	-	3242	14	NNC	ENSMUSG00000038859.8	novel	3247	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCTGTAAGTGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	144294922	144201335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_144202838_144203417_144203456_144212582_144212776_144214454_144214527_144215337_144215549_144217629_144217778_144218799_144218968_144221253_144221407_144222267_144222406_144222884_144222957_144223059_144223122_144255738_144255826_144261366_144261443_144294600
ENSMUSG00000038859.8_144201336_144294922_2	chr5	-	3240	14	NNC	ENSMUSG00000038859.8	novel	3247	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCTGTAAGTGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	144294922	144201335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_144202843_144203417_144203456_144212582_144212776_144214454_144214527_144215337_144215549_144217629_144217778_144218799_144218961_144221253_144221407_144222267_144222406_144222884_144222957_144223059_144223122_144255738_144255826_144261366_144261443_144294600
ENSMUSG00000038861.15_94882042_94901672_1	chr3	+	1721	4	ISM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	0	12482	0	-11785	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATATAGGCGAGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	94882041	94901672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94882397_94891293_94892231_94900276_94900505_94901471
ENSMUSG00000038861.15_94882187_94903955_1	chr3	+	1778	6	ISM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	145	10199	0	-9502	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGTTGCCCTCAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	94882186	94903955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94882397_94891293_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890
ENSMUSG00000038861.15_94891403_94906195_1	chr3	+	1660	7	ISM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	9361	7959	7975	-7262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATATAAGATTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	94891402	94906195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158
ENSMUSG00000038861.15_94891472_94906260_1	chr3	+	1656	7	ISM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	9430	7894	8044	-7197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATCCACCAGGTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	94891471	94906260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158
ENSMUSG00000038861.15_94891570_94906365_1	chr3	+	1663	7	ISM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	9528	7789	8142	-7092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCAAAGCTGTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	94891569	94906365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158
ENSMUSG00000038861.15_94891677_94911602_1	chr3	+	1667	8	ISM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	9635	2552	8249	-1855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTCATCCTTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	94891676	94911602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550
ENSMUSG00000038861.15_94891839_94912030_1	chr3	+	1672	9	ISM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	9797	2124	8411	-1427	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGTGGTACAGATTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	94891838	94912030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944
ENSMUSG00000038861.15_94892056_94913240_1	chr3	+	1661	10	ISM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	10014	914	8628	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATGTGACACCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	94892055	94913240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
ENSMUSG00000038861.15_94892134_94913280_1	chr3	+	1623	10	ISM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	10092	874	8706	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGGCATCCTCCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	94892133	94913280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
ENSMUSG00000038861.15_94892173_94913457_1	chr3	+	1761	10	ISM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	10131	697	8745	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCACCTCTTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	94892172	94913457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
ENSMUSG00000038861.15_94900417_94913558_1	chr3	+	1664	9	ISM	ENSMUSG00000038861.15	ENSMUST00000125476.8	3400	12	16989	534	16989	97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCCCTCAGGGGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	94900416	94913558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
ENSMUSG00000038861.15_94901562_94913739_1	chr3	+	1667	8	ISM	ENSMUSG00000038861.15	ENSMUST00000125476.8	3400	12	18134	353	18134	278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCACTTGCTGAGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	94901561	94913739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
ENSMUSG00000038861.15_94903178_94913906_1	chr3	+	1664	7	ISM	ENSMUSG00000038861.15	ENSMUST00000125476.8	3400	12	19750	186	19750	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTGAAATAAAATCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	94903177	94913906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
ENSMUSG00000038861.15_94903907_94914092_1	chr3	+	1756	6	ISM	ENSMUSG00000038861.15	ENSMUST00000125476.8	3400	12	20479	0	20479	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCTATGAGTACACATTA	NA	NA	NA	NA	NA	NA	NA	NA	94903906	94914092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
ENSMUSG00000038872.11_109676883_109683865_1	chr8	+	3372	2	ISM	ENSMUSG00000038872.11	ENSMUST00000043896.10	16433	10	235607	4397	235607	-4397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAGGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	109676882	109683865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_109678403_109682013
ENSMUSG00000038876.13_29222172_29230445_1	chr10	-	1809	2	NNC	ENSMUSG00000038876.13	novel	1948	3	NA	NA	3264	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAATTTGTTTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	29230445	29222171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_29223880_29230344
ENSMUSG00000038876.13_29222172_29238022_1	chr10	-	1861	3	FSM	ENSMUSG00000038876.13	ENST00000368314.6	1938	3	17	60	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAATTTGTTTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	29238022	29222171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_29223880_29230333_29230444_29237979
ENSMUSG00000038876.13_29222172_29238022_2	chr10	-	1856	3	NNC	ENSMUSG00000038876.13	novel	1938	3	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAATTTGTTTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	29238022	29222171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_29223880_29230333_29230439_29237979
ENSMUSG00000038876.13_29222172_29238022_3	chr10	-	1860	3	NNC	ENSMUSG00000038876.13	novel	4323	3	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAATTTGTTTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	29238022	29222171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_29223880_29230334_29230444_29237979
ENSMUSG00000038876.13_29222874_29238022_1	chr10	-	1225	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160372.9	1948	3	21	702	17	-220	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGGACCATGAGTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	29238022	29222873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_29223880_29230287_29230444_29237959
ENSMUSG00000038880.14_25114090_25115263_1	chr17	+	913	3	NNC	ENSMUSG00000038880.14	novel	918	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	NA	NA	NA	NA	NA	NA	NA	25114089	25115263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_25114463_25114635_25114679_25114766
ENSMUSG00000038880.14_25114240_25114795_1	chr17	+	323	3	FSM	ENSMUSG00000038880.14	ENST00000177742.7	688	3	99	266	99	-266	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATGTACCACGATTGGC	NA	NA	NA	NA	NA	NA	NA	NA	25114239	25114795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25114463_25114635_25114679_25114738
ENSMUSG00000038880.14_25114299_25114854_1	chr17	+	323	3	FSM	ENSMUSG00000038880.14	ENST00000177742.7	688	3	158	207	158	-207	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGCGAAACCAGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	25114298	25114854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25114463_25114635_25114679_25114738
ENSMUSG00000038880.14_25114363_25114914_1	chr17	+	319	3	FSM	ENSMUSG00000038880.14	ENST00000177742.7	688	3	222	147	222	-147	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTCGCTGAACGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	25114362	25114914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25114463_25114635_25114679_25114738
ENSMUSG00000038884.15_20779938_20785484_1	chr9	+	1564	8	FSM	ENSMUSG00000038884.15	ENSMUST00000043911.8	1683	8	0	119	0	-119	multi-exon	TRUE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTTGTGCAAAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	20779937	20785484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
ENSMUSG00000038884.15_20780094_20785604_1	chr9	+	1528	8	FSM	ENSMUSG00000038884.15	ENSMUST00000043911.8	1683	8	156	-1	156	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAATAGCCTTAATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	20780093	20785604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
ENSMUSG00000038886.11_80001297_80002977_1	chr7	-	479	3	ISM	ENSMUSG00000038886.11	ENSMUST00000098346.5	6554	24	18146	2452	16499	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTTGGAACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	80002977	80001296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80001600_80002673_80002782_80002909
ENSMUSG00000038886.11_80001356_80003036_1	chr7	-	479	3	ISM	ENSMUSG00000038886.11	ENSMUST00000098346.5	6554	24	18087	2511	16440	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCGCTCTGCCTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	80003036	80001355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80001600_80002673_80002782_80002909
ENSMUSG00000038886.11_80001474_80006163_1	chr7	-	494	4	NIC	ENSMUSG00000038886.11	novel	3613	22	NA	NA	13313	-188	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCTTCCGCCTGCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	80006163	80001473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_80001600_80002673_80002782_80002909_80003096_80006089
ENSMUSG00000038886.11_80001549_80006219_1	chr7	-	475	4	NIC	ENSMUSG00000038886.11	novel	3613	22	NA	NA	13257	-263	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCTTGACTTTGCTATA	NA	NA	NA	NA	NA	NA	NA	NA	80006219	80001548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_80001600_80002673_80002782_80002909_80003096_80006089
ENSMUSG00000038886.11_80002723_80008103_1	chr7	-	499	4	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	11373	1437	11373	-1437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGAAGCCAAGAACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	80008103	80002722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80002782_80002905_80003096_80006089_80006227_80007990
ENSMUSG00000038886.11_80002989_80008763_1	chr7	-	492	4	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	10713	1703	10713	-1703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCGCTCTTTCCACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	80008763	80002988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80003096_80006089_80006227_80007990_80008133_80008657
ENSMUSG00000038886.11_80008081_80010719_1	chr7	-	500	5	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	8757	6795	8757	-6795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGCCAGTCATGGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	80010719	80008080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643
ENSMUSG00000038886.11_80008750_80010875_1	chr7	-	512	4	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	8601	7464	8601	-7464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGGACTATGTGAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	80010875	80008749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80008792_80009027_80009143_80009383_80009507_80010643
ENSMUSG00000038886.11_80009082_80012114_1	chr7	-	489	4	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	7362	7796	7362	-7796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGTGTACTATGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	80012114	80009081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80009143_80009383_80009507_80010643_80010881_80012046
ENSMUSG00000038886.11_80012122_80013248_1	chr7	-	491	5	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	6228	10836	6228	-10836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCCAGCCCCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	80013248	80012121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214
ENSMUSG00000038886.11_80012414_80013408_1	chr7	-	503	4	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	6068	11128	6068	-11128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCCATGATGCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	80013408	80012413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80012425_80012636_80012752_80012901_80013085_80013214
ENSMUSG00000038886.11_80012682_80013764_1	chr7	-	545	4	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	5712	11396	5712	-11396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGACCTACAGCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	80013764	80012681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80012752_80012901_80013085_80013214_80013418_80013675
ENSMUSG00000038886.11_80013027_80016666_1	chr7	-	489	4	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	2810	11741	2810	-11741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGTACCCGCTGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	80016666	80013026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80013085_80013214_80013418_80013675_80013854_80016616
ENSMUSG00000038886.11_80013354_80017113_1	chr7	-	484	4	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	2363	12068	2363	-12068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCCGGCCTCCAGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	80017113	80013353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80013418_80013675_80013854_80016616_80016804_80017058
ENSMUSG00000038886.11_80016659_80018050_1	chr7	-	536	4	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	1426	15373	1426	-15373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCACCCCGGGCTATTA	NA	NA	NA	NA	NA	NA	NA	NA	80018050	80016658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80016804_80017058_80017233_80017444_80017573_80017961
ENSMUSG00000038886.11_80017128_80018382_1	chr7	-	534	4	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	1094	15842	1094	-15842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATTATGCCATCAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	80018382	80017127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80017233_80017444_80017573_80017961_80018134_80018253
ENSMUSG00000038886.11_80017507_80018590_1	chr7	-	506	4	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	886	16221	886	-16221	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTACTTTGCCTTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	80018590	80017506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80017573_80017961_80018134_80018253_80018399_80018467
ENSMUSG00000038886.11_80018091_80019377_1	chr7	-	483	4	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	99	16805	99	-16805	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATCCTCAACAGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	80019377	80018090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80018134_80018253_80018399_80018467_80018726_80019340
ENSMUSG00000038888.9_43321440_43326307_1	chr7	+	1050	3	FSM	ENSMUSG00000038888.9	ENST00000421832.3	1043	3	-7	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGCAAGTTGAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	43321439	43326307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_43321504_43324541_43325071_43325850
ENSMUSG00000038895.17_21966756_21969551_1	chr9	-	1391	6	ISM	ENSMUSG00000038895.17	ENSMUST00000043922.7	2108	9	13090	0	13086	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAGCCTGGATAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	21969551	21966755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21967190_21967288_21967389_21967709_21967825_21968582_21968695_21968796_21968975_21969099
ENSMUSG00000038895.17_21967755_21982555_1	chr9	-	1443	7	ISM	ENSMUSG00000038895.17	ENSMUST00000043922.7	2108	9	86	999	82	-759	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATCCAACCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	21982555	21967754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21967825_21968582_21968695_21968796_21968975_21969099_21969712_21976996_21977213_21979443_21979488_21982344
ENSMUSG00000038900.18_32851732_32854508_1	chr2	+	1081	7	FSM	ENSMUSG00000038900.18	ENSMUST00000126610.2	1242	7	161	0	161	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAATTGTTGGGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	32851731	32854508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ENSMUSG00000038900.18_32851732_32854508_2	chr2	+	1076	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	161	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAATTGTTGGGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	32851731	32854508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32851852_32852060_32852130_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ENSMUSG00000038900.18_32851732_32854508_3	chr2	+	1075	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	161	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAATTGTTGGGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	32851731	32854508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32851852_32852060_32852135_32852585_32852685_32853002_32853079_32853508_32853596_32853752_32853866_32854002
ENSMUSG00000038900.18_32851752_32854508_1	chr2	+	1061	7	FSM	ENSMUSG00000038900.18	ENSMUST00000126610.2	1242	7	181	0	181	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAATTGTTGGGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	32851751	32854508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ENSMUSG00000038900.18_32851752_32854508_2	chr2	+	1055	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	181	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAATTGTTGGGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	32851751	32854508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32851852_32852060_32852135_32852585_32852685_32853002_32853079_32853508_32853596_32853752_32853866_32854002
ENSMUSG00000038909.17_95166316_95185471_1	chr11	-	1462	10	ISM	ENSMUSG00000038909.17	ENST00000510819.5	1768	12	15547	0	14957	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCACCTCATGCTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	95185471	95166315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388
ENSMUSG00000038909.17_95166499_95197024_1	chr11	-	1429	11	ISM	ENSMUSG00000038909.17	ENST00000510819.5	1768	12	3994	183	3404	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCCCTCAGCACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	95197024	95166498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95196874
ENSMUSG00000038909.17_95166621_95201015_1	chr11	-	1460	12	FSM	ENSMUSG00000038909.17	ENST00000510819.5	1768	12	3	305	3	-122	multi-exon	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACTTAAAGTGACCTATC	NA	NA	NA	NA	NA	NA	NA	NA	95201015	95166620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95196874_95197023_95200860
ENSMUSG00000038909.17_95167285_95194052_1	chr11	-	1142	10	ISM	ENSMUSG00000038909.17	ENST00000509773.5	1773	13	6977	786	6376	-786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTTAAAGAGACAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	95194052	95167284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95193958
ENSMUSG00000038909.17_95167354_95194084_1	chr11	-	1105	10	ISM	ENSMUSG00000038909.17	ENST00000509773.5	1773	13	6945	855	6344	-855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCCGTGGACATTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	95194084	95167353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95193958
ENSMUSG00000038909.17_95168393_95196923_1	chr11	-	1085	10	ISM	ENSMUSG00000038909.17	ENST00000509773.5	1773	13	4106	1894	3505	-1894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCAGACCTGGGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	95196923	95168392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95193958_95194136_95196874
ENSMUSG00000038909.17_95171215_95197024_1	chr11	-	1139	9	ISM	ENSMUSG00000038909.17	ENST00000509773.5	1773	13	4005	4716	3404	-4716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTGTTGCCGAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	95197024	95171214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95193958_95194136_95196874
ENSMUSG00000038909.17_95171256_95190870_1	chr11	-	927	9	ISM	ENSMUSG00000038909.17	ENSMUST00000092766.12	3414	15	9558	6171	9558	-4757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCGACAGGGCTACGGG	NA	NA	NA	NA	NA	NA	NA	NA	95190870	95171255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804
ENSMUSG00000038909.17_95171285_95200909_1	chr11	-	1116	10	ISM	ENSMUSG00000038909.17	ENST00000509773.5	1773	13	120	4786	109	-4786	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCGTGCATCCTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	95200909	95171284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95193958_95194136_95196874_95197023_95200860
ENSMUSG00000038909.17_95172326_95201015_1	chr11	-	1197	9	ISM	ENSMUSG00000038909.17	ENST00000509773.5	1773	13	14	5827	3	-5827	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGGATCTGGTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	95201015	95172325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95193958_95194136_95196874_95197023_95200860
ENSMUSG00000038930.12_79966646_79970754_1	chr7	-	1113	6	NNC	ENSMUSG00000038930.12	novel	1140	7	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCCCTTAGTGGATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	79970754	79966645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_79966826_79968606_79968775_79968988_79969090_79969839_79969962_79970049_79970447_79970609
ENSMUSG00000038930.12_79966646_79970754_2	chr7	-	1116	7	FSM	ENSMUSG00000038930.12	ENST00000394258.6	1140	7	25	-1	25	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCCCTTAGTGGATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	79970754	79966645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_79966799_79967200_79967231_79968606_79968775_79968988_79969090_79969839_79969962_79970049_79970447_79970609
ENSMUSG00000038930.12_79966646_79970754_3	chr7	-	1113	7	NNC	ENSMUSG00000038930.12	novel	1140	7	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCCCTTAGTGGATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	79970754	79966645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_79966799_79967200_79967231_79968606_79968775_79968988_79969090_79969839_79969962_79970052_79970447_79970609
ENSMUSG00000038930.12_79966646_79970754_4	chr7	-	1111	7	ISM	ENSMUSG00000038930.12	ENSMUST00000121882.8	2324	9	3438	302	25	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCCCTTAGTGGATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	79970754	79966645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79966799_79967200_79967231_79968606_79968775_79968993_79969090_79969839_79969962_79970049_79970447_79970609
ENSMUSG00000038930.12_79966646_79970754_6	chr7	-	1110	6	NNC	ENSMUSG00000038930.12	novel	1140	7	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCCCTTAGTGGATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	79970754	79966645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_79966823_79968606_79968775_79968988_79969090_79969839_79969962_79970049_79970447_79970609
ENSMUSG00000038930.12_79966646_79970754_7	chr7	-	1106	6	NNC	ENSMUSG00000038930.12	novel	1140	7	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCCCTTAGTGGATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	79970754	79966645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_79966799_79968586_79968775_79968988_79969090_79969839_79969962_79970049_79970447_79970609
ENSMUSG00000038930.12_79966646_79970754_8	chr7	-	1109	7	NNC	ENSMUSG00000038930.12	novel	1140	7	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCCCTTAGTGGATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	79970754	79966645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_79966799_79967200_79967231_79968606_79968775_79968988_79969090_79969839_79969962_79970049_79970447_79970616
ENSMUSG00000038930.12_79966646_79970754_9	chr7	-	1114	7	NNC	ENSMUSG00000038930.12	novel	1140	7	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCCCTTAGTGGATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	79970754	79966645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_79966799_79967200_79967231_79968606_79968775_79968988_79969090_79969839_79969962_79970049_79970441_79970605
ENSMUSG00000038932.14_180277047_180284382_1	chr2	-	1347	5	ISM	ENSMUSG00000038932.14	ENSMUST00000037877.11	2225	6	119	13298	76	-2	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATTCATGAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	180284382	180277046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_180277189_180280196_180280441_180282093_180282257_180282673_180282858_180283768
ENSMUSG00000038932.14_180277047_180284382_2	chr2	-	1344	5	NNC	ENSMUSG00000038932.14	novel	1428	5	NA	NA	76	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATTCATGAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	180284382	180277046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_180277183_180280196_180280444_180282093_180282257_180282673_180282858_180283768
ENSMUSG00000038932.14_180277047_180284382_3	chr2	-	1339	5	NNC	ENSMUSG00000038932.14	novel	2225	6	NA	NA	76	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATTCATGAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	180284382	180277046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_180277189_180280196_180280441_180282093_180282249_180282673_180282858_180283768
ENSMUSG00000038932.14_180277047_180284434_1	chr2	-	1399	5	ISM	ENSMUSG00000038932.14	ENSMUST00000037877.11	2225	6	67	13298	24	-2	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	948	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATTCATGAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	180284434	180277046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_180277189_180280196_180280441_180282093_180282257_180282673_180282858_180283768
ENSMUSG00000038936.14_179495825_179514229_1	chr1	+	1373	12	FSM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	50	525	50	-525	multi-exon	FALSE	canonical	NA	NA	NA	NA	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCGAAGTCTAAACGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	179495824	179514229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
ENSMUSG00000038936.14_179498147_179514390_1	chr1	+	1249	11	ISM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	2372	364	2372	-364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTTCATATCTCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	179498146	179514390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
ENSMUSG00000038936.14_179505607_179514503_1	chr1	+	1166	9	ISM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	9832	251	9832	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGGTGTTGCTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	179505606	179514503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
ENSMUSG00000038936.14_179505645_179514569_1	chr1	+	1194	9	ISM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	9870	185	9870	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGCCTTCCCTGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	179505644	179514569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
ENSMUSG00000038936.14_179505674_179514641_1	chr1	+	1237	9	ISM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	9899	113	9899	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTAAGTGAAACTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	179505673	179514641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
ENSMUSG00000038936.14_179506444_179514754_1	chr1	+	1289	8	ISM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	10669	0	10669	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCCCCTTTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	179506443	179514754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
ENSMUSG00000038936.14_179507148_179514754_1	chr1	+	1240	7	ISM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	11373	0	11373	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCCCCTTTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	179507147	179514754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
ENSMUSG00000038943.17_79944261_79965265_1	chr7	+	2144	14	FSM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	34	734	8	-67	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCAACCACATGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	79944260	79965265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
ENSMUSG00000038943.17_79950783_79965419_1	chr7	+	2088	12	ISM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	6556	580	6530	87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGACATGAAGTAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	79950782	79965419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
ENSMUSG00000038943.17_79950822_79965481_1	chr7	+	2111	12	ISM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	6595	518	6569	149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAATGCTGTAGCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	79950821	79965481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
ENSMUSG00000038943.17_79950880_79965524_1	chr7	+	2096	12	ISM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	6653	475	6627	192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACCTGGCTGGCACTAT	NA	NA	NA	NA	NA	NA	NA	NA	79950879	79965524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
ENSMUSG00000038943.17_79954142_79965675_1	chr7	+	2186	11	ISM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	9915	324	9889	-324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCAGTCTCCCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	79954141	79965675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
ENSMUSG00000038943.17_79954292_79965738_1	chr7	+	2099	11	ISM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	10065	261	10039	-261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGAGGCTGTCTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	79954291	79965738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
ENSMUSG00000038943.17_79954476_79965999_1	chr7	+	2262	10	ISM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	10249	0	10223	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTACACTGTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	79954475	79965999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
ENSMUSG00000038949.9_179374074_179432116_1	chr1	+	603	4	FSM	ENSMUSG00000038949.9	ENST00000366511.1	644	4	42	-1	42	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTATCATGAGCAATTG	NA	NA	NA	NA	NA	NA	NA	NA	179374073	179432116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_179374182_179406902_179407334_179429266_179429298_179432083
ENSMUSG00000038954.15_45088212_45349070_1	chr17	+	905	9	ISM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	173	81107	173	-10209	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTATCAGAAAATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	45088211	45349070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962
ENSMUSG00000038954.15_45097518_45352170_1	chr17	+	848	9	ISM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	9479	78007	9479	-7109	internal_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCTGGATCACAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	45097517	45352170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102
ENSMUSG00000038954.15_45302620_45359279_1	chr17	+	898	8	ISM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	214581	70898	0	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCGTAATAACAGAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	45302619	45359279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352274_45359168
ENSMUSG00000038954.15_45305251_45430166_1	chr17	+	900	8	ISM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	217212	11	2631	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCCCTAGGGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	45305250	45430166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352274_45359168_45359280_45430029
ENSMUSG00000038954.15_45347599_45359279_1	chr17	+	330	3	NNC	ENSMUSG00000038954.15	novel	727	7	NA	NA	44979	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCGTAATAACAGAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	45347598	45359279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_45347712_45348962_45349071_45359170
ENSMUSG00000038957.14_57623390_57656180_1	chr9	+	1606	5	ISM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	7567	3602	7567	-3602	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTGGCCCTGCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	57623389	57656180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ENSMUSG00000038957.14_57647225_57656731_1	chr9	+	1608	3	ISM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	31402	3051	31402	-3051	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAATGAGCCCAGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	57647224	57656731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57647327_57651867_57652086_57655443
ENSMUSG00000038965.18_16971025_16994352_1	chr16	-	1386	3	ISM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	25004	1146	24982	695	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTCTCAGAGCAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	16994352	16971024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_16972147_16977853_16978041_16994275
ENSMUSG00000038965.18_16971309_17020409_1	chr16	-	1370	5	FSM	ENSMUSG00000038965.18	ENSMUST00000232139.2	2906	5	104	1432	104	411	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGTGGTGACCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	17020409	16971308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298_17019498_17020359
ENSMUSG00000038965.18_16971363_17020513_1	chr16	-	1420	5	FSM	ENSMUSG00000038965.18	ENSMUST00000232139.2	2906	5	0	1486	0	357	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCTGTAGTCAGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	17020513	16971362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298_17019498_17020359
ENSMUSG00000038967.14_94917280_94918720_1	chr11	-	899	2	ISM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	13460	196	13460	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACCCCACCCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	94918720	94917279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94918149_94918690
ENSMUSG00000038967.14_94917386_94919402_1	chr11	-	975	3	ISM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	12778	302	12778	-302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGCAATGTTTCTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	94919402	94917385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94918149_94918690_94918805_94919304
ENSMUSG00000038967.14_94917437_94919402_1	chr11	-	924	3	ISM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	12778	353	12778	-353	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGGCCCACCGAGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	94919402	94917436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94918149_94918690_94918805_94919304
ENSMUSG00000038967.14_94917615_94919785_1	chr11	-	893	5	ISM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	12395	531	12395	-531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCACATTTGGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	94919785	94917614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94918149_94918690_94918805_94919304_94919413_94919523_94919623_94919747
ENSMUSG00000038967.14_94917780_94922684_1	chr11	-	958	8	ISM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	9496	696	9496	-696	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGAGGGTTGGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	94922684	94917779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94918149_94918690_94918805_94919304_94919413_94919523_94919623_94919747_94919825_94920479_94920558_94920742_94920833_94922661
ENSMUSG00000038967.14_94917905_94922741_1	chr11	-	890	8	ISM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	9439	821	9439	-821	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCTGATGGCCAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	94922741	94917904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94918149_94918690_94918805_94919304_94919413_94919523_94919623_94919747_94919825_94920479_94920558_94920742_94920833_94922661
ENSMUSG00000038967.14_94918069_94923348_1	chr11	-	889	9	ISM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	8832	985	8832	-985	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGACTGGTGTGTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	94923348	94918068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94918149_94918690_94918805_94919304_94919413_94919523_94919623_94919747_94919825_94920479_94920558_94920742_94920833_94922661_94922847_94923290
ENSMUSG00000038967.14_94918719_94930278_1	chr11	-	899	9	ISM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	1902	1635	1902	-1635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGACAGATGCTGTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	94930278	94918718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94918805_94919304_94919413_94919523_94919623_94919747_94919825_94920479_94920558_94920742_94920833_94922661_94922847_94923290_94923363_94930174
ENSMUSG00000038967.14_94919341_94932042_1	chr11	-	893	9	ISM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	138	2257	138	-2257	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACACCCCAGCCTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	94932042	94919340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94919413_94919523_94919623_94919747_94919825_94920479_94920558_94920742_94920833_94922661_94922847_94923290_94923363_94930174_94930317_94931964
ENSMUSG00000038967.14_94919386_94932180_1	chr11	-	986	9	ISM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	0	2302	0	-2302	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGGAAGATCGAGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	94932180	94919385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94919413_94919523_94919623_94919747_94919825_94920479_94920558_94920742_94920833_94922661_94922847_94923290_94923363_94930174_94930317_94931964
ENSMUSG00000038975.15_153612926_153618635_1	chr3	-	1364	9	NNC	ENSMUSG00000038975.15	novel	1381	9	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	990	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	153618635	153612925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615091_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ENSMUSG00000038975.15_153612926_153618635_2	chr3	-	1361	9	NNC	ENSMUSG00000038975.15	novel	1381	9	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1037	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	153618635	153612925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617661_153618570
ENSMUSG00000038975.15_153612926_153618635_3	chr3	-	1363	9	NNC	ENSMUSG00000038975.15	novel	1381	9	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	153618635	153612925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_153613379_153613691_153613835_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ENSMUSG00000038975.15_153613814_153616366_1	chr3	-	620	7	ISM	ENSMUSG00000038975.15	ENST00000462549.1	1009	9	1285	576	1285	-576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCCTCCCTAAAGATC	NA	NA	NA	NA	NA	NA	NA	NA	153616366	153613813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_153613842_153614426_153614553_153614985_153615097_153615182_153615285_153615690_153615799_153615897_153616004_153616327
ENSMUSG00000038975.15_153614488_153616468_1	chr3	-	633	6	ISM	ENSMUSG00000038975.15	ENST00000462549.1	1009	9	1183	1250	1183	-1250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGGTGGCTTTGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	153616468	153614487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_153614553_153614985_153615097_153615182_153615285_153615690_153615799_153615897_153616004_153616327
ENSMUSG00000038975.15_153615051_153617670_1	chr3	-	669	6	ISM	ENSMUSG00000038975.15	ENST00000462549.1	1009	9	-19	1813	-19	-1813	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTGCATGAACTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	153617670	153615050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_153615097_153615182_153615285_153615690_153615799_153615897_153616004_153616327_153616526_153617561
ENSMUSG00000038982.11_38786420_38803090_1	chr13	-	1669	3	ISM	ENSMUSG00000038982.11	ENSMUST00000035899.8	5634	5	15995	3603	15947	-3603	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCGTTAGTGACCACTG	NA	NA	NA	NA	NA	NA	NA	NA	38803090	38786419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_38788005_38796618_38796678_38803065
ENSMUSG00000038982.11_38786724_38819037_1	chr13	-	1679	5	FSM	ENSMUSG00000038982.11	ENSMUST00000035899.8	5634	5	48	3907	0	-3907	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTCATGCTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	38819037	38786723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_38788005_38796618_38796678_38803065_38803196_38814968_38815052_38818911
ENSMUSG00000038987.9_32667860_32671483_1	chr2	-	1267	7	ISM	ENSMUSG00000038987.9	ENST00000614677.1	1601	8	2929	0	2929	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGCCAGAACACGAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	32671483	32667859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32668030_32668128_32668393_32668947_32669110_32669301_32669433_32669720_32669989_32670653_32670808_32671365
ENSMUSG00000038987.9_32667860_32671484_1	chr2	-	1265	7	NNC	ENSMUSG00000038987.9	novel	1601	8	NA	NA	2928	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGCCAGAACACGAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	32671484	32667859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_32668030_32668128_32668393_32668947_32669107_32669301_32669433_32669720_32669989_32670653_32670808_32671365
ENSMUSG00000038987.9_32667860_32671505_1	chr2	-	1286	7	NNC	ENSMUSG00000038987.9	novel	1601	8	NA	NA	2907	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGCCAGAACACGAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	32671505	32667859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_32668030_32668128_32668393_32668947_32669113_32669307_32669433_32669720_32669989_32670653_32670808_32671365
ENSMUSG00000038987.9_32667874_32671539_1	chr2	-	1303	7	NNC	ENSMUSG00000038987.9	novel	1601	8	NA	NA	2873	-14	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCGAATGGGGATCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	32671539	32667873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_32668030_32668128_32668393_32668947_32669110_32669301_32669433_32669720_32669983_32670653_32670808_32671365
ENSMUSG00000038987.9_32667900_32671541_1	chr2	-	1289	7	NNC	ENSMUSG00000038987.9	novel	1601	8	NA	NA	2871	-40	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGATCTCAGGCCCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	32671541	32667899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_32668030_32668128_32668393_32668947_32669099_32669286_32669433_32669720_32669989_32670653_32670808_32671365
ENSMUSG00000038987.9_32667928_32671602_1	chr2	-	1315	7	NNC	ENSMUSG00000038987.9	novel	1601	8	NA	NA	2810	-68	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCCGGTCCGCATCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	32671602	32667927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_32668030_32668128_32668393_32668947_32669113_32669307_32669433_32669720_32669989_32670653_32670808_32671365
ENSMUSG00000038987.9_32667950_32671600_1	chr2	-	1288	7	NNC	ENSMUSG00000038987.9	novel	1601	8	NA	NA	2812	-90	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGATCTTGGGCTGGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	32671600	32667949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_32668030_32668128_32668393_32668947_32669110_32669301_32669433_32669720_32669983_32670653_32670808_32671365
ENSMUSG00000038987.9_32667957_32671605_1	chr2	-	1284	7	NNC	ENSMUSG00000038987.9	novel	1601	8	NA	NA	2807	-97	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGGGGATCTTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	32671605	32667956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_32668030_32668128_32668393_32668947_32669110_32669301_32669433_32669720_32669989_32670653_32670800_32671365
ENSMUSG00000038987.9_32667995_32674254_1	chr2	-	1308	8	FSM	ENSMUSG00000038987.9	ENST00000614677.1	1601	8	158	135	158	-135	multi-exon	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGCTGCAGCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	32674254	32667994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_32668030_32668128_32668393_32668947_32669110_32669301_32669433_32669720_32669989_32670653_32670808_32671365_32671638_32674232
ENSMUSG00000038987.9_32668227_32674325_1	chr2	-	1246	7	ISM	ENSMUSG00000038987.9	ENST00000614677.1	1601	8	87	367	87	-367	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGCTGGTATTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	32674325	32668226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_32668393_32668947_32669110_32669301_32669433_32669720_32669989_32670653_32670808_32671365_32671638_32674232
ENSMUSG00000038987.9_32668227_32674326_1	chr2	-	1245	7	NNC	ENSMUSG00000038987.9	novel	1601	8	NA	NA	86	-367	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGCTGGTATTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	32674326	32668226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_32668393_32668947_32669113_32669306_32669433_32669720_32669989_32670653_32670808_32671365_32671638_32674232
ENSMUSG00000038987.9_32668227_32674440_1	chr2	-	1360	7	NNC	ENSMUSG00000038987.9	novel	1601	8	NA	NA	0	-367	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGCTGGTATTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	32674440	32668226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_32668393_32668947_32669110_32669301_32669433_32669721_32669989_32670653_32670808_32671365_32671638_32674232
ENSMUSG00000038987.9_32668227_32674440_2	chr2	-	1360	7	NNC	ENSMUSG00000038987.9	novel	1601	8	NA	NA	0	-367	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGCTGGTATTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	32674440	32668226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_32668393_32668947_32669110_32669301_32669433_32669720_32669989_32670653_32670808_32671365_32671638_32674233
ENSMUSG00000038987.9_32668227_32674440_3	chr2	-	1355	7	NNC	ENSMUSG00000038987.9	novel	1601	8	NA	NA	0	-367	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGCTGGTATTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	32674440	32668226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_32668393_32668947_32669110_32669301_32669433_32669720_32669983_32670653_32670808_32671365_32671638_32674232
ENSMUSG00000038991.18_38684055_38687537_1	chr13	-	1761	2	ISM	ENSMUSG00000038991.18	ENSMUST00000160653.2	2586	10	24353	-194	24353	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGAGTCTTACTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	38687537	38684054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_38685685_38687406
ENSMUSG00000038991.18_38685078_38712300_1	chr13	-	1654	10	FSM	ENSMUSG00000038991.18	ENSMUST00000035988.16	2843	10	166	1023	166	-829	multi-exon	FALSE	canonical	NA	NA	NA	NA	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTAGTGGAGAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	38712300	38685077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712163
ENSMUSG00000038991.18_38685124_38712355_1	chr13	-	1663	10	FSM	ENSMUSG00000038991.18	ENSMUST00000035988.16	2843	10	111	1069	111	-875	multi-exon	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAGATCCCTTCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	38712355	38685123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712163
ENSMUSG00000038991.18_38685178_38712466_1	chr13	-	1720	10	FSM	ENSMUSG00000038991.18	ENSMUST00000035988.16	2843	10	0	1123	0	-929	multi-exon	FALSE	canonical	NA	NA	NA	NA	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAAGGTGTCGGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	38712466	38685177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712163
ENSMUSG00000039001.13_179899170_179900238_1	chr2	+	386	6	NNC	ENSMUSG00000039001.13	novel	394	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTTGCTGTTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	179899169	179900238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900071_179900170
ENSMUSG00000039007.11_33083275_33594369_1	chr15	+	1594	8	FSM	ENSMUSG00000039007.11	ENSMUST00000042167.10	1923	8	0	329	0	-281	multi-exon	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGACATGGATGAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	33083274	33594369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_33083469_33212961_33213410_33250071_33250280_33302485_33302694_33381481_33381594_33466771_33466864_33497308_33497511_33594239
ENSMUSG00000039007.11_33083398_33594369_1	chr15	+	1471	8	FSM	ENSMUSG00000039007.11	ENSMUST00000042167.10	1923	8	123	329	0	-281	multi-exon	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGACATGGATGAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	33083397	33594369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_33083469_33212961_33213410_33250071_33250280_33302485_33302694_33381481_33381594_33466771_33466864_33497308_33497511_33594239
ENSMUSG00000039007.11_33213096_33594698_1	chr15	+	1595	7	ISM	ENSMUSG00000039007.11	ENSMUST00000228916.2	1842	9	129698	-48	129698	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTTGTGGTTTATATTA	NA	NA	NA	NA	NA	NA	NA	NA	33213095	33594698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_33213410_33250071_33250280_33302485_33302694_33381481_33381594_33466771_33466864_33497308_33497511_33594239
ENSMUSG00000039007.11_33213226_33594698_1	chr15	+	1465	7	ISM	ENSMUSG00000039007.11	ENSMUST00000228916.2	1842	9	129828	-48	129828	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTTGTGGTTTATATTA	NA	NA	NA	NA	NA	NA	NA	NA	33213225	33594698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_33213410_33250071_33250280_33302485_33302694_33381481_33381594_33466771_33466864_33497308_33497511_33594239
ENSMUSG00000039018.16_139717477_139730427_1	chr7	+	1320	11	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	0	-272	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCCATCTCAAGTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	139717476	139730427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_139717687_139718231_139718291_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ENSMUSG00000039018.16_139717562_139730485_1	chr7	+	1293	11	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	85	-214	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTAAAATAAAATGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	139717561	139730485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_139717687_139718231_139718291_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ENSMUSG00000039018.16_139717576_139730503_1	chr7	+	1300	11	FSM	ENSMUSG00000039018.16	ENSMUST00000036977.9	1595	11	99	196	99	-196	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGGCCCACTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	139717575	139730503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_139717687_139718231_139718297_139720108_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ENSMUSG00000039018.16_139717598_139730564_1	chr7	+	1341	11	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	121	-135	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTCATTTTCAGACAA	NA	NA	NA	NA	NA	NA	NA	NA	139717597	139730564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_139717687_139718231_139718312_139720121_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ENSMUSG00000039018.16_139718231_139730700_1	chr7	+	1387	10	ISM	ENSMUSG00000039018.16	ENSMUST00000036977.9	1595	11	754	-1	754	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTTTTCATTGTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	139718230	139730700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_139718297_139720108_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ENSMUSG00000039031.17_26726003_26753205_1	chr10	+	655	6	ISM	ENSMUSG00000039031.17	ENSMUST00000039557.9	3651	15	77530	41439	77530	-41439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGGAGCAGCCATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	26726002	26753205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_26726107_26730869_26730934_26736552_26736729_26745916_26746083_26748668_26748761_26753152
ENSMUSG00000039031.17_26745967_26763943_1	chr10	+	696	6	ISM	ENSMUSG00000039031.17	ENSMUST00000039557.9	3651	15	97494	30701	97494	-30701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCACTTATTGATTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	26745966	26763943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_26746083_26748668_26748761_26753152_26753231_26754886_26755047_26756683_26756767_26763776
ENSMUSG00000039033.12_139675734_139899260_1	chr2	-	1713	13	ISM	ENSMUSG00000039033.12	ENSMUST00000046656.9	2480	14	9420	334	9420	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGGTTTCAGTGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	139899260	139675733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206
ENSMUSG00000039033.12_139675848_139899387_1	chr2	-	1726	13	ISM	ENSMUSG00000039033.12	ENSMUST00000046656.9	2480	14	9293	448	9293	-448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGTAGTCCATTTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	139899387	139675847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206
ENSMUSG00000039041.16_179813388_179813955_1	chr2	+	223	2	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	110	4124	110	-4124	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTCTCGTGTACATCC	NA	NA	NA	NA	NA	NA	NA	NA	179813387	179813955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179813482_179813826
ENSMUSG00000039041.16_179813407_179814015_1	chr2	+	264	2	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	129	4064	129	-4064	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGACCTCTGGGACCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	179813406	179814015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179813482_179813826
ENSMUSG00000039041.16_179813824_179814673_1	chr2	+	242	2	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	546	3406	546	-3406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTCAAGCGGGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	179813823	179814673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179814041_179814648
ENSMUSG00000039041.16_179813947_179815722_1	chr2	+	231	3	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	669	2357	669	-2357	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGAGCACTGCCGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	179813946	179815722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179814041_179814648_179814766_179815702
ENSMUSG00000039041.16_179813947_179815750_1	chr2	+	259	3	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	669	2329	669	-2329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGAACAACCCCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	179813946	179815750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179814041_179814648_179814766_179815702
ENSMUSG00000039041.16_179814706_179816134_1	chr2	+	217	3	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	1428	1945	1428	-1945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCACAGCCAGCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	179814705	179816134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179814766_179815702_179815827_179816101
ENSMUSG00000039041.16_179815738_179816706_1	chr2	+	225	3	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	2460	1373	2460	-1373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGACCTCCAGCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	179815737	179816706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179815827_179816101_179816189_179816657
ENSMUSG00000039041.16_179816145_179817059_1	chr2	+	233	3	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	2867	1020	2867	-1020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCACCCAGCTCAGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	179816144	179817059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179816189_179816657_179816740_179816952
ENSMUSG00000039041.16_179817029_179817465_1	chr2	+	232	2	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	3751	614	3751	-614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTACCTGCCCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	179817028	179817465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179817186_179817390
ENSMUSG00000039041.16_179817148_179817549_1	chr2	+	197	2	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	3870	530	3870	-530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATGTCCATGGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	179817147	179817549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179817186_179817390
ENSMUSG00000039041.16_179817482_179817928_1	chr2	+	232	3	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	4204	151	4204	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAGACAAGAAAGACGA	NA	NA	NA	NA	NA	NA	NA	NA	179817481	179817928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179817549_179817646_179817750_179817866
ENSMUSG00000039041.16_179817533_179817975_1	chr2	+	228	3	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	4255	104	4255	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGTGTCCGTCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	179817532	179817975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179817549_179817646_179817750_179817866
ENSMUSG00000039041.16_179817686_179818075_1	chr2	+	273	2	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	4408	4	4408	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTATGGTCTGGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	179817685	179818075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179817750_179817866
ENSMUSG00000039043.6_79575109_79585107_2	chr7	-	2271	6	NNC	ENSMUSG00000039043.6	novel	2277	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGACTGAGGCTTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	79585107	79575108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_79576589_79577369_79577538_79577919_79578127_79579320_79579454_79581550_79581627_79584900
ENSMUSG00000039047.18_152419757_152491727_1	chr3	+	1781	11	FSM	ENSMUSG00000039047.18	ENSMUST00000159899.8	4737	11	20	2936	7	168	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAACCAACAGAAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	152419756	152491727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
ENSMUSG00000039047.18_152419757_152491796_1	chr3	+	1850	11	FSM	ENSMUSG00000039047.18	ENSMUST00000159899.8	4737	11	20	2867	7	237	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGACCCTTACCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	152419756	152491796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
ENSMUSG00000039047.18_152443899_152492070_1	chr3	+	1794	8	ISM	ENSMUSG00000039047.18	ENSMUST00000159899.8	4737	11	24162	2593	24149	511	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACACAGCTTTACTCGCA	NA	NA	NA	NA	NA	NA	NA	NA	152443898	152492070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
ENSMUSG00000039047.18_152453346_152492657_1	chr3	+	1775	3	ISM	ENSMUSG00000039047.18	ENSMUST00000045029.15	1761	12	33596	-1098	33596	1098	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTTAGTGGTAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	152453345	152492657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_152453411_152472075_152472161_152491032
ENSMUSG00000039050.9_179761197_179786711_1	chr2	+	516	5	ISM	ENSMUSG00000039050.9	ENST00000439951.6	1549	13	41	16679	41	-16679	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATTCACAAAGCCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	179761196	179786711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179761271_179778771_179778906_179780005_179780151_179782897_179782974_179786624
ENSMUSG00000039050.9_179778866_179790245_1	chr2	+	521	6	ISM	ENSMUSG00000039050.9	ENST00000439951.6	1549	13	17710	13145	4	-13145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAGGTCAGTCACCACC	NA	NA	NA	NA	NA	NA	NA	NA	179778865	179790245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218
ENSMUSG00000039050.9_179780053_179790338_1	chr2	+	527	5	ISM	ENSMUSG00000039050.9	ENST00000358053.3	1429	13	1191	13052	1191	-13052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTCTGGGGCAAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	179780052	179790338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218
ENSMUSG00000039050.9_179782895_179792079_1	chr2	+	603	5	ISM	ENSMUSG00000039050.9	ENST00000358053.3	1429	13	4033	11311	4033	-11311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACAGGCCCATCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	179782894	179792079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971
ENSMUSG00000039050.9_179786740_179795039_1	chr2	+	547	6	ISM	ENSMUSG00000039050.9	ENST00000358053.3	1429	13	7878	8351	7878	-8351	internal_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAATAGATCCTGCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	179786739	179795039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991
ENSMUSG00000039050.9_179786877_179795115_1	chr2	+	608	5	ISM	ENSMUSG00000039050.9	ENST00000358053.3	1429	13	8015	8275	8015	-8275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTCAGCTGCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	179786876	179795115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991
ENSMUSG00000039050.9_179790303_179797205_1	chr2	+	567	5	ISM	ENSMUSG00000039050.9	ENST00000358053.3	1429	13	11441	6185	11441	-6185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCCCTCTGAGGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	179790302	179797205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059
ENSMUSG00000039050.9_179790371_179800839_1	chr2	+	512	6	ISM	ENSMUSG00000039050.9	ENST00000439951.6	1549	13	29215	2551	11509	-2551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGCGGCTAGAGGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	179790370	179800839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179800821
ENSMUSG00000039050.9_179792015_179803301_1	chr2	+	531	6	ISM	ENSMUSG00000039050.9	ENST00000439951.6	1549	13	30859	89	13153	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTACACAGGAGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	179792014	179803301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179800821_179800913_179803281
ENSMUSG00000039050.9_179794992_179803390_1	chr2	+	589	5	ISM	ENSMUSG00000039050.9	ENST00000358053.3	1429	13	16130	0	16130	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCCAGGAGCAGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	179794991	179803390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
ENSMUSG00000039055.5_94535822_94538139_1	chr11	-	823	3	ISM	ENSMUSG00000039055.5	ENST00000393271.6	2138	8	3639	0	3639	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	94538139	94535821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94536432_94536641_94536832_94538116
ENSMUSG00000039055.5_94535949_94538197_1	chr11	-	754	3	ISM	ENSMUSG00000039055.5	ENST00000393271.6	2138	8	3581	127	3581	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACGCCCAGCCACTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	94538197	94535948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94536432_94536641_94536832_94538116
ENSMUSG00000039055.5_94536159_94538790_1	chr11	-	755	5	ISM	ENSMUSG00000039055.5	ENST00000393271.6	2138	8	2988	337	2988	-337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTTGAATCTACCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	94538790	94536158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538609_94538769
ENSMUSG00000039055.5_94536269_94538990_1	chr11	-	765	6	ISM	ENSMUSG00000039055.5	ENST00000393271.6	2138	8	2788	447	2788	-447	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGTTGACTGATATCCC	NA	NA	NA	NA	NA	NA	NA	NA	94538990	94536268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538609_94538769_94538889_94538968
ENSMUSG00000039055.5_94536401_94540878_1	chr11	-	743	7	ISM	ENSMUSG00000039055.5	ENST00000393271.6	2138	8	900	579	900	-579	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAATTTGCTGGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	94540878	94536400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538609_94538769_94538889_94538968_94539056_94540833
ENSMUSG00000039055.5_94536706_94541065_1	chr11	-	751	7	ISM	ENSMUSG00000039055.5	ENST00000393271.6	2138	8	713	884	713	-884	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGCTCGGAGATGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	94541065	94536705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94536832_94538116_94538233_94538453_94538609_94538769_94538889_94538968_94539056_94540833_94540965_94541048
ENSMUSG00000039055.5_94536763_94541113_1	chr11	-	742	7	ISM	ENSMUSG00000039055.5	ENST00000393271.6	2138	8	665	941	665	-941	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCCGGCAGGGGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	94541113	94536762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94536832_94538116_94538233_94538453_94538609_94538769_94538889_94538968_94539056_94540833_94540965_94541048
ENSMUSG00000039055.5_94536799_94541180_1	chr11	-	773	7	ISM	ENSMUSG00000039055.5	ENST00000393271.6	2138	8	598	977	598	-977	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGACTGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	94541180	94536798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94536832_94538116_94538233_94538453_94538609_94538769_94538889_94538968_94539056_94540833_94540965_94541048
ENSMUSG00000039055.5_94538211_94541357_1	chr11	-	823	6	ISM	ENSMUSG00000039055.5	ENST00000393271.6	2138	8	421	2389	421	-2389	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGAAGCCCAGGCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	94541357	94538210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94538233_94538453_94538609_94538769_94538889_94538968_94539056_94540833_94540965_94541048
ENSMUSG00000039055.5_94538768_94541532_1	chr11	-	823	4	ISM	ENSMUSG00000039055.5	ENST00000393271.6	2138	8	246	2946	246	-2946	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGATATGCACTGAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	94541532	94538767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94538889_94538968_94539056_94540833_94540965_94541048
ENSMUSG00000039055.5_94540862_94541723_1	chr11	-	778	2	ISM	ENSMUSG00000039055.5	ENST00000393271.6	2138	8	55	5040	55	-5040	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGGAGGAGGACAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	94541723	94540861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_94540965_94541048
ENSMUSG00000039063.6_6193276_6217790_1	chr2	-	1797	5	FSM	ENSMUSG00000039063.6	ENSMUST00000042658.5	1851	5	54	0	54	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCGTCTATCCACCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	6217790	6193275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_6194463_6200393_6200595_6211225_6211324_6213278_6213401_6217601
ENSMUSG00000039065.12_31603593_31618135_1	chr15	+	1714	5	ISM	ENSMUSG00000039065.12	ENSMUST00000161061.3	2364	6	1329	620	1329	454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAACCTAACCACACAGT	NA	NA	NA	NA	NA	NA	NA	NA	31603592	31618135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_31603721_31606056_31606335_31608241_31608380_31609711_31609763_31617016
ENSMUSG00000039065.12_31603638_31618191_1	chr15	+	1725	5	ISM	ENSMUSG00000039065.12	ENSMUST00000161061.3	2364	6	1374	564	1374	510	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGAAAGGCTATGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	31603637	31618191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_31603721_31606056_31606335_31608241_31608380_31609711_31609763_31617016
ENSMUSG00000039065.12_31603700_31618240_1	chr15	+	1712	5	ISM	ENSMUSG00000039065.12	ENSMUST00000161061.3	2364	6	1436	515	1436	-515	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTATTTTATGAGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	31603699	31618240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_31603721_31606056_31606335_31608241_31608380_31609711_31609763_31617016
ENSMUSG00000039065.12_31608282_31617436_1	chr15	+	569	3	ISM	ENSMUSG00000039065.12	ENSMUST00000042702.7	1164	5	6018	245	6018	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCTACCTGCCCAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	31608281	31617436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_31608380_31609711_31609763_31617016
ENSMUSG00000039065.12_31608323_31617499_1	chr15	+	591	3	ISM	ENSMUSG00000039065.12	ENSMUST00000042702.7	1164	5	6059	182	6059	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTAAGGGACCGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	31608322	31617499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_31608380_31609711_31609763_31617016
ENSMUSG00000039067.6_108307727_108315090_1	chr8	-	698	7	NNC	ENSMUSG00000039067.6	novel	651	7	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2019	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATGACCAGATGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	108315090	108307726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_108307789_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
ENSMUSG00000039067.6_108307727_108315090_2	chr8	-	700	7	NNC	ENSMUSG00000039067.6	novel	651	7	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1988	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATGACCAGATGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	108315090	108307726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_108307795_108309013_108309106_108310804_108310886_108311494_108311589_108312336_108312430_108313256_108313349_108314910
ENSMUSG00000039067.6_108307727_108315090_3	chr8	-	704	7	FSM	ENSMUSG00000039067.6	ENST00000567958.5	651	7	-53	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATGACCAGATGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	108315090	108307726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_108307795_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
ENSMUSG00000039067.6_108307888_108312392_1	chr8	-	391	5	ISM	ENSMUSG00000039067.6	ENSMUST00000044106.6	1581	7	2704	875	2645	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGACTGAACTCCAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	108312392	108307887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494_108311593_108312336
ENSMUSG00000039069.20_179713586_179727431_1	chr2	+	1180	7	FSM	ENSMUSG00000039069.20	ENSMUST00000108901.8	1444	7	0	264	0	-264	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGGACAGGAGGCCATAG	NA	NA	NA	NA	NA	NA	NA	NA	179713585	179727431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_179713680_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ENSMUSG00000039069.20_179720413_179727544_1	chr2	+	1198	6	FSM	ENSMUSG00000039069.20	ENSMUST00000087563.7	1346	6	-3	151	-3	-151	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCCAGCCTCTCAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	179720412	179727544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ENSMUSG00000039069.20_179720558_179727688_1	chr2	+	1197	6	FSM	ENSMUSG00000039069.20	ENSMUST00000087563.7	1346	6	142	7	142	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	179720557	179727688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ENSMUSG00000039084.9_94455873_94459841_1	chr11	+	1579	4	FSM	ENSMUSG00000039084.9	ENST00000258969.4	1661	4	-20	102	0	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGCCTGCCAGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	94455872	94459841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_94456695_94458623_94458788_94459034_94459192_94459405
ENSMUSG00000039084.9_94455873_94459953_1	chr11	+	1691	4	FSM	ENSMUSG00000039084.9	ENST00000258969.4	1661	4	-20	-10	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTCTCACCTATCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	94455872	94459953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_94456695_94458623_94458788_94459034_94459192_94459405
ENSMUSG00000039084.9_94456078_94459953_1	chr11	+	1486	4	FSM	ENSMUSG00000039084.9	ENST00000258969.4	1661	4	185	-10	185	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTCTCACCTATCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	94456077	94459953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_94456695_94458623_94458788_94459034_94459192_94459405
ENSMUSG00000039087.18_38072847_38131233_1	chr13	+	4475	10	ISM	ENSMUSG00000039087.18	ENST00000349384.10	7285	11	-13	3802	0	-2865	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTTCCTGGGCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	38072846	38131233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832
ENSMUSG00000039087.18_38076601_38131362_1	chr13	+	4429	9	ISM	ENSMUSG00000039087.18	ENST00000349384.10	7285	11	3741	3673	3741	-2736	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCTGAGCCTGAAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	38076600	38131362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832
ENSMUSG00000039087.18_38077844_38131489_1	chr13	+	4426	8	ISM	ENSMUSG00000039087.18	ENST00000349384.10	7285	11	4984	3546	4984	-2609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGGGGTGACGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	38077843	38131489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832
ENSMUSG00000039087.18_38077900_38131538_1	chr13	+	4419	8	ISM	ENSMUSG00000039087.18	ENST00000349384.10	7285	11	5040	3497	5040	-2560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCCAGTAAGGCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	38077899	38131538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832
ENSMUSG00000039087.18_38082389_38131639_1	chr13	+	4458	7	ISM	ENSMUSG00000039087.18	ENST00000349384.10	7285	11	9529	3396	9529	-2459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGAGAGACCAGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	38082388	38131639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832
ENSMUSG00000039087.18_38083622_38132710_1	chr13	+	4439	7	ISM	ENSMUSG00000039087.18	ENST00000349384.10	7285	11	10762	2325	10762	-1388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGCAAGCACCACGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	38083621	38132710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832_38131640_38132618
ENSMUSG00000039087.18_38083682_38132770_1	chr13	+	4439	7	ISM	ENSMUSG00000039087.18	ENST00000349384.10	7285	11	10822	2265	10822	-1328	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGAGTCCACCCACAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	38083681	38132770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832_38131640_38132618
ENSMUSG00000039087.18_38100087_38132913_1	chr13	+	4411	6	ISM	ENSMUSG00000039087.18	ENST00000349384.10	7285	11	27227	2122	-15115	-1185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCAGCTGAGCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	38100086	38132913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832_38131640_38132618
ENSMUSG00000039087.18_38100450_38133034_1	chr13	+	4467	5	ISM	ENSMUSG00000039087.18	ENST00000349384.10	7285	11	27590	2001	-14752	-1064	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCCAATCCTGGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	38100449	38133034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_38100572_38112098_38112289_38113533_38116466_38130832_38131640_38132618
ENSMUSG00000039087.18_38130827_38133889_1	chr13	+	2084	2	ISM	ENSMUSG00000039087.18	ENST00000611109.1	3551	3	15625	209	15625	-209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTATTATTATTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	38130826	38133889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_38131640_38132618
ENSMUSG00000039087.18_38130992_38134098_1	chr13	+	2128	2	ISM	ENSMUSG00000039087.18	ENST00000611109.1	3551	3	15790	0	15790	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGAGTGGTCCTCCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	38130991	38134098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_38131640_38132618
ENSMUSG00000039099.8_79398990_79426463_1	chr7	+	1562	13	NNC	ENSMUSG00000039099.8	novel	1892	14	NA	NA	68	-590	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCGCAGGCGCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	79398989	79426463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_79399168_79399712_79399906_79402195_79402261_79405680_79405765_79408160_79408274_79418076_79418192_79419088_79419261_79420725_79420797_79421264_79421352_79422148_79422269_79423100_79423315_79425259_79425324_79426377
ENSMUSG00000039099.8_79399025_79426888_1	chr7	+	1626	14	NNC	ENSMUSG00000039099.8	novel	1892	14	NA	NA	103	-165	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGAAGATCCCAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	79399024	79426888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_79399168_79399712_79399906_79402195_79402261_79405680_79405765_79408160_79408274_79418076_79418192_79419088_79419261_79420725_79420797_79421264_79421352_79422148_79422269_79423100_79423315_79425259_79425324_79426377_79426535_79426860
ENSMUSG00000039099.8_79399107_79426921_1	chr7	+	1577	14	NNC	ENSMUSG00000039099.8	novel	1892	14	NA	NA	185	-132	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATTTTAATTTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	79399106	79426921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_79399168_79399712_79399906_79402195_79402261_79405680_79405765_79408160_79408274_79418076_79418192_79419088_79419261_79420725_79420797_79421264_79421352_79422148_79422269_79423100_79423315_79425259_79425324_79426377_79426535_79426860
ENSMUSG00000039099.8_79399709_79427053_1	chr7	+	1652	13	NNC	ENSMUSG00000039099.8	novel	1892	14	NA	NA	787	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGCCCTCCCATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	79399708	79427053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_79399906_79402195_79402261_79405680_79405765_79408160_79408274_79418076_79418192_79419088_79419261_79420725_79420797_79421264_79421352_79422148_79422269_79423100_79423315_79425259_79425324_79426377_79426535_79426860
ENSMUSG00000039099.8_79399825_79427053_1	chr7	+	1536	13	NNC	ENSMUSG00000039099.8	novel	1892	14	NA	NA	903	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGCCCTCCCATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	79399824	79427053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_79399906_79402195_79402261_79405680_79405765_79408160_79408274_79418076_79418192_79419088_79419261_79420725_79420797_79421264_79421352_79422148_79422269_79423100_79423315_79425259_79425324_79426377_79426535_79426860
ENSMUSG00000039103.13_151942619_151943473_1	chr3	-	770	2	ISM	ENSMUSG00000039103.13	ENSMUST00000199423.5	2016	13	17475	-584	15969	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTTTTCTTTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	151943473	151942618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_151943217_151943301
ENSMUSG00000039103.13_151943203_151948445_1	chr3	-	708	4	ISM	ENSMUSG00000039103.13	ENSMUST00000199423.5	2016	13	12503	0	10997	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTCTGTCCTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	151948445	151943202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_151943217_151943301_151943660_151943883_151944070_151948295
ENSMUSG00000039103.13_151943288_151952911_1	chr3	-	1167	5	ISM	ENSMUSG00000039103.13	ENST00000334785.12	2164	11	6531	173	6531	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTGATCCTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	151952911	151943287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_151943660_151943883_151944070_151948295_151948518_151949462_151949661_151952722
ENSMUSG00000039103.13_151943408_151953613_1	chr3	-	1091	6	ISM	ENSMUSG00000039103.13	ENST00000334785.12	2164	11	5829	293	5829	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGTATTTACCGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	151953613	151943407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_151943660_151943883_151944070_151948295_151948518_151949462_151949661_151952722_151952912_151953569
ENSMUSG00000039103.13_151943463_151953671_1	chr3	-	1094	6	ISM	ENSMUSG00000039103.13	ENST00000334785.12	2164	11	5771	348	5771	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATACTGCAGGATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	151953671	151943462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_151943660_151943883_151944070_151948295_151948518_151949462_151949661_151952722_151952912_151953569
ENSMUSG00000039103.13_151943582_151953901_1	chr3	-	1129	7	ISM	ENSMUSG00000039103.13	ENST00000334785.12	2164	11	5541	467	5541	-294	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCTCCATGGTTCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	151953901	151943581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_151943660_151943883_151944070_151948295_151948518_151949462_151949661_151952722_151952912_151953569_151953741_151953816
ENSMUSG00000039103.13_151948377_151958766_1	chr3	-	1158	8	ISM	ENSMUSG00000039103.13	ENST00000334785.12	2164	11	676	5262	676	-5089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGATAGAAGAAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	151958766	151948376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_151948518_151949462_151949661_151952722_151952912_151953569_151953741_151953816_151954006_151955296_151955339_151958444_151958594_151958687
ENSMUSG00000039103.13_151949456_151959285_1	chr3	-	1061	8	ISM	ENSMUSG00000039103.13	ENST00000334785.12	2164	11	157	6341	157	-6168	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCACTTAGTGCTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	151959285	151949455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_151949661_151952722_151952912_151953569_151953741_151953816_151954006_151955296_151955339_151958444_151958594_151958687_151958767_151959248
ENSMUSG00000039103.13_151949593_151959343_1	chr3	-	982	8	ISM	ENSMUSG00000039103.13	ENST00000334785.12	2164	11	99	6478	99	-6305	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATTAATTTTGAACAAT	NA	NA	NA	NA	NA	NA	NA	NA	151959343	151949592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_151949661_151952722_151952912_151953569_151953741_151953816_151954006_151955296_151955339_151958444_151958594_151958687_151958767_151959248
ENSMUSG00000039105.7_63463009_63468987_1	chr4	+	1130	3	NNC	ENSMUSG00000039105.7	novel	1135	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12967	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAGCAGAATTTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	63463008	63468987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_63463237_63466826_63466923_63468181
ENSMUSG00000039105.7_63463156_63468355_1	chr4	+	399	3	FSM	ENSMUSG00000039105.7	ENST00000679150.1	400	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGAAGCGCCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	63463155	63468355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_63463237_63466821_63466923_63468138
ENSMUSG00000039105.7_63463156_63468987_1	chr4	+	887	2	FSM	ENSMUSG00000039105.7	ENST00000677452.1	821	2	1	-67	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAGCAGAATTTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	63463155	63468987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_63463237_63468181
ENSMUSG00000039114.17_36910610_36918333_1	chr13	-	490	3	FSM	ENSMUSG00000039114.17	ENSMUST00000037623.15	1619	3	118	1011	118	-178	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGAGCGCGGGACCGG	NA	NA	NA	NA	NA	NA	NA	NA	36918333	36910609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_36910831_36914080_36914226_36918209
ENSMUSG00000039114.17_36910715_36918451_1	chr13	-	503	3	FSM	ENSMUSG00000039114.17	ENSMUST00000037623.15	1619	3	0	1116	0	-283	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATTCGAACTCTGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	36918451	36910714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_36910831_36914080_36914226_36918209
ENSMUSG00000039128.14_5799105_5800499_1	chr2	-	727	2	ISM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	49476	0	49234	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTGCTCTCTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	5800499	5799104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5799692_5800359
ENSMUSG00000039128.14_5799237_5803219_1	chr2	-	641	3	ISM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	46756	132	46514	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCTGAACCTGCAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	5803219	5799236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5799692_5800359_5800498_5803171
ENSMUSG00000039128.14_5799352_5808786_1	chr2	-	636	4	ISM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	41189	247	40947	-247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGCCAGTATCCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	5808786	5799351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757
ENSMUSG00000039128.14_5799476_5812317_1	chr2	-	711	6	ISM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	37658	371	37416	-371	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCCTACTGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	5812317	5799475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241
ENSMUSG00000039128.14_5799638_5826126_1	chr2	-	638	8	ISM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	23849	533	23607	-533	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCTCTGGCAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	5826126	5799637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086
ENSMUSG00000039128.14_5800360_5849752_1	chr2	-	894	11	FSM	ENSMUSG00000039128.14	ENST00000378900.6	875	11	-19	0	-19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGTACATGGAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	5849752	5800359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_5800498_5803171_5803301_5808757_5808787_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ENSMUSG00000039128.14_5800360_5849752_4	chr2	-	893	11	NNC	ENSMUSG00000039128.14	novel	875	11	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGTACATGGAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	5849752	5800359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_5800498_5803171_5803301_5808757_5808787_5812241_5812318_5815606_5815656_5826087_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ENSMUSG00000039128.14_5800410_5827996_1	chr2	-	685	8	ISM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	21979	1305	21737	-50	internal_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCCACCGGGGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	5827996	5800409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912
ENSMUSG00000039128.14_5803172_5838524_1	chr2	-	700	9	ISM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	11451	4067	11209	-2812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGACCGACCATTTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	5838524	5803171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466
ENSMUSG00000039128.14_5808757_5846835_1	chr2	-	644	9	ISM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	3140	9652	2898	-8397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTACTGTAGTTAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	5846835	5808756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763
ENSMUSG00000039128.14_5809760_5849752_1	chr2	-	683	9	ISM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	223	10655	-19	-9400	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGAACACCTACAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	5849752	5809759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ENSMUSG00000039128.14_5826085_5849975_1	chr2	-	698	6	ISM	ENSMUSG00000039128.14	ENST00000378900.6	875	11	-242	25725	0	-25725	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCTTGTGAGTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	5849975	5826084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ENSMUSG00000039130.19_30366379_30373482_1	chr6	-	1027	4	ISM	ENSMUSG00000039130.19	ENSMUST00000152391.9	1673	10	17519	-4	17519	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCTAGAGAATTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30373482	30366378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30366745_30370263_30370471_30372736_30372950_30373241
ENSMUSG00000039130.19_30366683_30376020_1	chr6	-	961	6	ISM	ENSMUSG00000039130.19	ENSMUST00000080812.14	1824	10	15002	304	14981	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTGAAGATGCTCCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	30376020	30366682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30366745_30370263_30370471_30372736_30372950_30373241_30373483_30374763_30374919_30375937
ENSMUSG00000039130.19_30370267_30381863_1	chr6	-	1025	6	ISM	ENSMUSG00000039130.19	ENSMUST00000102992.10	1865	11	9164	3880	9138	-3794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTAAGATAGCCGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	30381863	30370266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30370471_30372736_30372950_30373241_30373483_30374763_30374919_30375937_30376066_30381779
ENSMUSG00000039130.19_30370421_30382667_1	chr6	-	1003	7	ISM	ENSMUSG00000039130.19	ENSMUST00000102992.10	1865	11	8360	4034	8334	-3948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCGTGGGTGAATATCA	NA	NA	NA	NA	NA	NA	NA	NA	30382667	30370420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30370471_30372736_30372950_30373241_30373483_30374763_30374919_30375937_30376066_30381779_30381864_30382535
ENSMUSG00000039130.19_30372921_30390874_1	chr6	-	919	8	ISM	ENSMUSG00000039130.19	ENSMUST00000102992.10	1865	11	153	6534	127	-6448	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAACCCGGAGTTGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	30390874	30372920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30372950_30373241_30373483_30374763_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387419_30387532_30390855
ENSMUSG00000039130.19_30373242_30390988_1	chr6	-	999	7	NNC	ENSMUSG00000039130.19	novel	1504	9	NA	NA	13	-6769	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	60	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGCTTCTCAGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	30390988	30373241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_30373483_30374763_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387424_30387532_30390855
ENSMUSG00000039130.19_30373242_30390988_2	chr6	-	1004	7	ISM	ENSMUSG00000039130.19	ENSMUST00000115184.2	1504	9	21	6769	13	-6769	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGCTTCTCAGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	30390988	30373241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30373483_30374763_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387419_30387532_30390855
ENSMUSG00000039148.6_5428351_5431040_1	chr19	-	2057	4	ISM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	7691	800	7691	-800	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCCTAGTAGGTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	5431040	5428350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008
ENSMUSG00000039148.6_5428392_5431108_1	chr19	-	2084	4	ISM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	7623	841	7623	-841	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTCATCTTCCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	5431108	5428391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008
ENSMUSG00000039148.6_5429005_5432837_1	chr19	-	2066	9	ISM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	5894	1454	5894	-1454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCATGGAACTCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	5432837	5429004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742
ENSMUSG00000039148.6_5429119_5433030_1	chr19	-	2063	10	ISM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	5701	1568	5701	-1568	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTCTCTAAGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	5433030	5429118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967
ENSMUSG00000039148.6_5429251_5433274_1	chr19	-	2094	11	ISM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	5457	1700	5457	-1700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGAAACCCAGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	5433274	5429250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182
ENSMUSG00000039148.6_5429382_5433726_1	chr19	-	2075	12	ISM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	5005	1831	5005	-1831	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGTGGGAGGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	5433726	5429381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647
ENSMUSG00000039148.6_5429624_5434062_1	chr19	-	2061	13	ISM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	4669	2073	4669	-2073	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGTTTTCAGGGTACTA	NA	NA	NA	NA	NA	NA	NA	NA	5434062	5429623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962
ENSMUSG00000039148.6_5429926_5434736_1	chr19	-	2071	16	ISM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	3995	2375	3995	-2375	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTCTGGTTATCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	5434736	5429925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645
ENSMUSG00000039148.6_5430087_5434977_1	chr19	-	2052	17	ISM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	3754	2536	3754	-2536	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5434977	5430086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850
ENSMUSG00000039156.20_54155907_54275724_1	chr5	+	2193	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	66	2675	0	-1554	multi-exon	TRUE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGAGACGAGCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	54155906	54275724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
ENSMUSG00000039156.20_54267128_54277052_1	chr5	+	2138	5	ISM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	111287	1347	111221	-226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCTGATTTTTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	54267127	54277052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
ENSMUSG00000039156.20_54273359_54276111_1	chr5	+	715	2	ISM	ENSMUSG00000039156.20	ENST00000467011.6	3833	12	117497	1167	117452	-1167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCAAGTGGCATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	54273358	54276111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_54273576_54275613
ENSMUSG00000039159.17_30214313_30241411_1	chr6	-	940	3	ISM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	63127	3025	63110	547	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTTTTGCCTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	30241411	30214312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30215083_30221666_30221796_30241370
ENSMUSG00000039159.17_30214463_30262183_1	chr6	-	955	6	ISM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	42355	3175	42338	397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGAGTGGTCCTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	30262183	30214462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30262145
ENSMUSG00000039163.11_117894391_117979231_1	chr9	-	354	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	14	801	0	-228	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCAAACTGGAGTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	117979231	117894390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
ENSMUSG00000039166.17_25046020_25076056_1	chr10	-	1289	2	FSM	ENSMUSG00000039166.17	ENSMUST00000100012.3	2321	2	0	1032	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTCTTACAGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	25076056	25046019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_25047147_25075894
ENSMUSG00000039166.17_25046020_25175005_1	chr10	-	2034	8	NNC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTCTTACAGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	25175005	25046019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_25047142_25096504_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25174937
ENSMUSG00000039168.16_31224460_31273607_1	chr15	+	675	4	FSM	ENSMUSG00000039168.16	ENSMUST00000044524.16	1555	4	0	880	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACATGGGCCTCAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	31224459	31273607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_31224730_31235918_31236016_31272534_31272578_31273342
ENSMUSG00000039168.16_31224601_31273723_1	chr15	+	650	4	FSM	ENSMUSG00000039168.16	ENSMUST00000044524.16	1555	4	141	764	-105	33	multi-exon	FALSE	canonical	NA	NA	NA	NA	1782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGTGCCATTAGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	31224600	31273723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_31224730_31235918_31236016_31272534_31272578_31273342
ENSMUSG00000039168.16_31224706_31273801_1	chr15	+	623	4	FSM	ENSMUSG00000039168.16	ENSMUST00000044524.16	1555	4	246	686	0	111	multi-exon	FALSE	canonical	NA	NA	NA	NA	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGAGGCCACTTTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	31224705	31273801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_31224730_31235918_31236016_31272534_31272578_31273342
ENSMUSG00000039178.10_53967021_54060748_1	chr5	+	1463	17	FSM	ENSMUSG00000039178.10	ENST00000511789.5	1382	17	-81	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCGAGGTCGCTGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	53967020	54060748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_53967201_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032278_54044670_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ENSMUSG00000039178.10_53986691_53992579_1	chr5	+	262	4	ISM	ENSMUSG00000039178.10	ENST00000264866.9	2228	20	19689	68720	19589	-68169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACGAAAGGTACATTAACA	NA	NA	NA	NA	NA	NA	NA	NA	53986690	53992579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_53986765_53987796_53987843_53990311_53990388_53992513
ENSMUSG00000039178.10_53992513_54060748_1	chr5	+	1280	16	NIC	ENSMUSG00000039178.10	novel	1382	17	NA	NA	25411	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCGAGGTCGCTGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	53992512	54060748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_+_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54044670_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ENSMUSG00000039182.7_14804833_14812496_1	chr13	+	1729	2	FSM	ENSMUSG00000039182.7	ENSMUST00000038690.6	2914	2	0	1185	0	-292	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGGAAACATAATATTTA	NA	NA	NA	NA	NA	NA	NA	NA	14804832	14812496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_14804950_14810884
ENSMUSG00000039182.7_14804862_14812547_1	chr13	+	1751	2	FSM	ENSMUSG00000039182.7	ENSMUST00000038690.6	2914	2	29	1134	29	-241	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTATTTAAGGTCTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	14804861	14812547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_14804950_14810884
ENSMUSG00000039183.7_25101593_25104484_1	chr17	-	1124	5	ISM	ENSMUSG00000039183.7	ENSMUST00000234597.2	1434	6	404	7	319	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	25104484	25101592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392
ENSMUSG00000039183.7_25101868_25105297_1	chr17	-	1120	7	FSM	ENSMUSG00000039183.7	ENSMUST00000044252.7	1427	7	25	282	6	155	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCAACAGGCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	25105297	25101867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
ENSMUSG00000039191.13_53747813_53810844_1	chr5	+	1761	12	FSM	ENSMUSG00000039191.13	ENST00000348160.9	2003	12	-7	249	0	-120	multi-exon	FALSE	canonical	NA	NA	NA	NA	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAACTCCAGCCAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	53747812	53810844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_53748067_53773698_53773880_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUSG00000039191.13_53748487_53810844_1	chr5	+	1892	12	NNC	ENSMUSG00000039191.13	novel	2081	12	NA	NA	68	-120	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAACTCCAGCCAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	53748486	53810844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_53748873_53773699_53773880_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUSG00000039191.13_53748487_53810844_2	chr5	+	1893	12	FSM	ENSMUSG00000039191.13	ENST00000505958.6	2081	12	68	120	68	-120	multi-exon	FALSE	canonical	NA	NA	NA	NA	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAACTCCAGCCAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	53748486	53810844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_53748873_53773698_53773880_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUSG00000039191.13_53748541_53810903_1	chr5	+	1898	12	FSM	ENSMUSG00000039191.13	ENST00000505958.6	2081	12	122	61	122	-61	multi-exon	FALSE	canonical	NA	NA	NA	NA	2174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGCCAGCACAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	53748540	53810903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_53748873_53773698_53773880_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUSG00000039191.13_53748541_53810903_2	chr5	+	1897	12	NNC	ENSMUSG00000039191.13	novel	2081	12	NA	NA	122	-61	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2027	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGCCAGCACAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	53748540	53810903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_53748873_53773699_53773880_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUSG00000039191.13_53748613_53810965_1	chr5	+	1882	11	NNC	ENSMUSG00000039191.13	novel	2081	12	NA	NA	194	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCTTTTTGCTGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	53748612	53810965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_53748873_53773698_53773913_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUSG00000039191.13_53748613_53810965_2	chr5	+	1888	12	FSM	ENSMUSG00000039191.13	ENST00000505958.6	2081	12	194	-1	194	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCTTTTTGCTGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	53748612	53810965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_53748873_53773698_53773880_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUSG00000039191.13_53748613_53810965_3	chr5	+	1887	12	NNC	ENSMUSG00000039191.13	novel	2081	12	NA	NA	194	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCTTTTTGCTGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	53748612	53810965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_53748873_53773699_53773880_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUSG00000039191.13_53748613_53810965_4	chr5	+	1883	12	NNC	ENSMUSG00000039191.13	novel	2081	12	NA	NA	194	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCTTTTTGCTGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	53748612	53810965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_53748873_53773698_53773880_53784724_53784764_53793308_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUSG00000039191.13_53773698_53811093_1	chr5	+	1653	10	FSM	ENSMUSG00000039191.13	ENST00000504907.5	1662	10	9	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCAGTGCAGGTGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	53773697	53811093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_53773880_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810646
ENSMUSG00000039191.13_53773698_53811093_2	chr5	+	1757	11	FSM	ENSMUSG00000039191.13	ENST00000681093.1	1760	11	4	-1	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCAGTGCAGGTGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	53773697	53811093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_53773880_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUSG00000039195.5_32269366_32271874_1	chr2	-	351	2	FSM	ENSMUSG00000039195.5	ENSMUST00000048792.5	680	2	76	253	0	-253	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCCCATCCAGGCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	32271874	32269365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_32269546_32271703
ENSMUSG00000039197.11_21126220_21431685_1	chr14	+	928	8	ISM	ENSMUSG00000039197.11	ENST00000673027.1	1134	10	-41	66356	0	-66356	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTGAGGACTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	21126219	21431685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21126390_21142434_21142510_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570
ENSMUSG00000039197.11_21126220_21498238_1	chr14	+	1426	11	FSM	ENSMUSG00000039197.11	ENSMUST00000224069.2	1818	11	0	392	0	197	multi-exon	FALSE	canonical	NA	NA	NA	NA	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTTAATTTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	21126219	21498238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_21126390_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ENSMUSG00000039197.11_21126220_21498298_1	chr14	+	1486	11	FSM	ENSMUSG00000039197.11	ENSMUST00000224069.2	1818	11	0	332	0	257	multi-exon	FALSE	canonical	NA	NA	NA	NA	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTATATTTCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	21126219	21498298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_21126390_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ENSMUSG00000039197.11_21126332_21498343_1	chr14	+	1419	11	FSM	ENSMUSG00000039197.11	ENSMUST00000224069.2	1818	11	112	287	71	-287	multi-exon	FALSE	canonical	NA	NA	NA	NA	1782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACTTTTTAAAGAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	21126331	21498343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_21126390_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ENSMUSG00000039197.11_21126338_21473605_1	chr14	+	845	9	ISM	ENSMUSG00000039197.11	ENST00000673027.1	1134	10	77	24436	77	-24436	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAGGAAGAGATCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	21126337	21473605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21126390_21142434_21142510_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570
ENSMUSG00000039197.11_21142433_21497944_1	chr14	+	910	9	ISM	ENSMUSG00000039197.11	ENST00000673027.1	1134	10	16172	97	-3	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAAGCGTCATCATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	21142432	21497944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21142510_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ENSMUSG00000039197.11_21142456_21498436_1	chr14	+	1318	9	FSM	ENSMUSG00000039197.11	ENST00000673352.1	1601	9	20	263	20	-194	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATACCTGATAATTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	21142455	21498436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21473570_21473658_21497881
ENSMUSG00000039197.11_21142495_21498480_1	chr14	+	1438	10	ISM	ENSMUSG00000039197.11	ENSMUST00000224069.2	1818	11	16275	150	59	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAATTATTCCTTATAAGC	NA	NA	NA	NA	NA	NA	NA	NA	21142494	21498480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ENSMUSG00000039197.11_21153922_21498630_1	chr14	+	1539	9	ISM	ENSMUSG00000039197.11	ENSMUST00000224069.2	1818	11	27702	0	11486	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGGATTTTTTTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	21153921	21498630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ENSMUSG00000039197.11_21284897_21498041_1	chr14	+	848	7	NNC	ENSMUSG00000039197.11	novel	1134	10	NA	NA	142461	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGACCACATCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	21284896	21498041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431577_21431686_21473570_21473658_21497881
ENSMUSG00000039197.11_21284897_21498631_1	chr14	+	1445	7	ISM	ENSMUSG00000039197.11	ENSMUST00000224069.2	1818	11	158677	-1	142461	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGATTTTTTTTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	21284896	21498631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ENSMUSG00000039197.11_21284897_21498631_2	chr14	+	1330	6	ISM	ENSMUSG00000039197.11	ENST00000673352.1	1601	9	142461	68	142461	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGATTTTTTTTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	21284896	21498631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21473570_21473658_21497881
ENSMUSG00000039199.7_106199055_106203033_1	chr8	-	859	6	ISM	ENSMUSG00000039199.7	ENSMUST00000044286.6	1737	11	7949	-58	7949	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGCGGACTTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	106203033	106199054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106199514_106199622_106199702_106199837_106199932_106200115_106200199_106202655_106202769_106203002
ENSMUSG00000039199.7_106199113_106203147_1	chr8	-	915	6	ISM	ENSMUSG00000039199.7	ENSMUST00000044286.6	1737	11	7835	0	7835	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCAATATCCGCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	106203147	106199112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106199514_106199622_106199702_106199837_106199932_106200115_106200199_106202655_106202769_106203002
ENSMUSG00000039199.7_106199339_106203723_1	chr8	-	903	8	ISM	ENSMUSG00000039199.7	ENSMUST00000044286.6	1737	11	7259	226	7259	-226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCGAGAGTCTGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	106203723	106199338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106199514_106199622_106199702_106199837_106199932_106200115_106200199_106202655_106202769_106203002_106203162_106203245_106203371_106203648
ENSMUSG00000039199.7_106199447_106205481_1	chr8	-	920	9	ISM	ENSMUSG00000039199.7	ENSMUST00000044286.6	1737	11	5501	334	5501	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGCTCTGCAGGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	106205481	106199446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106199514_106199622_106199702_106199837_106199932_106200115_106200199_106202655_106202769_106203002_106203162_106203245_106203371_106203648_106203751_106205383
ENSMUSG00000039199.7_106199883_106210228_1	chr8	-	863	8	ISM	ENSMUSG00000039199.7	ENSMUST00000044286.6	1737	11	754	770	754	-770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCTCAGACACACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	106210228	106199882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106199932_106200115_106200199_106202655_106202769_106203002_106203162_106203245_106203371_106203648_106203751_106205383_106205560_106210172
ENSMUSG00000039199.7_106202714_106210845_1	chr8	-	885	7	ISM	ENSMUSG00000039199.7	ENSMUST00000044286.6	1737	11	137	3601	137	-3601	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAGGAGACCCACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	106210845	106202713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106202769_106203002_106203162_106203245_106203371_106203648_106203751_106205383_106205560_106210172_106210416_106210820
ENSMUSG00000039199.7_106203009_106210982_1	chr8	-	961	6	ISM	ENSMUSG00000039199.7	ENSMUST00000044286.6	1737	11	0	3896	0	-3896	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAAGTAAGTGCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	106210982	106203008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106203162_106203245_106203371_106203648_106203751_106205383_106205560_106210172_106210416_106210820
ENSMUSG00000039199.7_106203118_106211017_1	chr8	-	887	6	ISM	ENSMUSG00000039199.7	ENSMUST00000044286.6	1737	11	-35	4005	-35	-4005	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTGTGGAGACCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	106211017	106203117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106203162_106203245_106203371_106203648_106203751_106205383_106205560_106210172_106210416_106210820
ENSMUSG00000039199.7_106203305_106214446_1	chr8	-	897	7	ISM	ENSMUSG00000039199.7	ENSMUST00000212303.2	2056	14	9056	4250	-3464	-4192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCGTGGAGTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	106214446	106203304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106203371_106203648_106203751_106205383_106205560_106210172_106210416_106210820_106211060_106212093_106212141_106214422
ENSMUSG00000039201.11_8021748_8042130_1	chrX	-	1321	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	290	1037	0	-1018	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTCTCCGAATGCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	8042130	8021747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
ENSMUSG00000039201.11_8021885_8042197_1	chrX	-	1251	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	223	1174	-67	-1155	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGCCCACCTCAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	8042197	8021884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
ENSMUSG00000039210.17_186957974_187083099_1	chr1	+	3471	7	ISM	ENSMUSG00000039210.17	ENSMUST00000110943.9	4702	8	10255	802	-403	179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATAGCTGTGTCAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	186957973	187083099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187073683_187073773_187080553
ENSMUSG00000039218.18_24022208_24036577_1	chr17	+	3702	11	ISM	ENSMUSG00000039218.18	ENSMUST00000190686.7	8864	15	47	7133	13	-7133	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTAAAAGAAAGAAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	24022207	24036577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095
ENSMUSG00000039218.18_24027438_24037202_1	chr17	+	3673	8	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	5243	6513	5243	-6508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATCTCCTGAACTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	24027437	24037202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095
ENSMUSG00000039218.18_24030646_24037530_1	chr17	+	3688	3	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	8451	6185	8451	-6180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCGGGACAAAGAAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	24030645	24037530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24030706_24031401_24031595_24034095
ENSMUSG00000039218.18_24031451_24037647_1	chr17	+	3696	2	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	9256	6068	9256	-6063	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTCTCAGACAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	24031450	24037647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24031595_24034095
ENSMUSG00000039218.18_24037022_24041502_1	chr17	+	3759	2	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	14827	2213	14827	-2208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCTTCCTCTTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	24037021	24041502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24040665_24041386
ENSMUSG00000039218.18_24037208_24041661_1	chr17	+	3732	2	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	15013	2054	15013	-2049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCGAGAGGAGGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	24037207	24041661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24040665_24041386
ENSMUSG00000039218.18_24037317_24042807_1	chr17	+	3679	3	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	15122	908	15122	-903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCCCTCAGTTACTCACC	NA	NA	NA	NA	NA	NA	NA	NA	24037316	24042807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24040665_24041386_24041675_24042764
ENSMUSG00000039218.18_24037437_24043037_1	chr17	+	3678	4	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	15242	678	15242	-673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTCACAAGAGGAAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	24037436	24043037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24040665_24041386_24041675_24042764_24042879_24042989
ENSMUSG00000039218.18_24037622_24043304_1	chr17	+	3665	5	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	15427	411	15427	-406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGAGGGGAGAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	24037621	24043304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
ENSMUSG00000039218.18_24037699_24043394_1	chr17	+	3678	5	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	15504	321	15504	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTCTTGTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	24037698	24043394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
ENSMUSG00000039218.18_24037975_24043715_1	chr17	+	3723	5	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	15780	0	15780	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTGTAGTCTTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	24037974	24043715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
ENSMUSG00000039219.19_14362382_14372766_1	chr13	+	1288	5	ISM	ENSMUSG00000039219.19	ENSMUST00000110534.8	5864	24	124005	1181	123998	-1181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAGCAAGTCACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	14362381	14372766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
ENSMUSG00000039220.17_36228374_36237318_1	chr17	+	733	7	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	286	5855	286	-5844	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGGAAAAGTCGAACCACG	NA	NA	NA	NA	NA	NA	NA	NA	36228373	36237318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291
ENSMUSG00000039220.17_36228428_36237366_1	chr17	+	727	7	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	340	5807	340	-5796	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGAGACCCGGGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	36228427	36237366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291
ENSMUSG00000039220.17_36228537_36237694_1	chr17	+	748	8	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	449	5479	449	-5468	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAAGAAGAACTCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	36228536	36237694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663
ENSMUSG00000039220.17_36234259_36237901_1	chr17	+	728	8	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	6171	5272	6171	-5261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAGAAATACAAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	36234258	36237901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865
ENSMUSG00000039220.17_36234987_36238833_1	chr17	+	720	8	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	6899	4340	6899	-4329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGCCCCTGTCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	36234986	36238833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801
ENSMUSG00000039220.17_36235211_36239121_1	chr17	+	734	8	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	7123	4052	7123	-4041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTCCCCAGAGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	36235210	36239121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073
ENSMUSG00000039220.17_36237138_36239346_1	chr17	+	728	7	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	9050	3827	9050	-3816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAACCAGCTGACTCGCA	NA	NA	NA	NA	NA	NA	NA	NA	36237137	36239346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294
ENSMUSG00000039220.17_36237386_36239595_1	chr17	+	759	7	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	9298	3578	9298	-3567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACCGACATGCTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	36237385	36239595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543
ENSMUSG00000039220.17_36237731_36239743_1	chr17	+	760	6	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	9643	3430	9643	-3419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGGGAGAAGGGCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	36237730	36239743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543
ENSMUSG00000039220.17_36238860_36240343_1	chr17	+	721	6	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	10772	2830	10772	-2819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTGATGGAGCAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	36238859	36240343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283
ENSMUSG00000039220.17_36239072_36240478_1	chr17	+	815	5	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	10984	2695	10984	-2684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTGACACTCCCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	36239071	36240478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283
ENSMUSG00000039220.17_36239374_36241005_1	chr17	+	725	6	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	11286	2168	11286	-2157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGAAGGGTATGCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	36239373	36241005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942
ENSMUSG00000039220.17_36239630_36241296_1	chr17	+	723	6	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	11542	1877	11542	-1866	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGCGTGGGGGTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	36239629	36241296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183
ENSMUSG00000039220.17_36239678_36241358_1	chr17	+	737	6	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	11590	1815	11590	-1804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAATGAGCCACCGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	36239677	36241358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183
ENSMUSG00000039220.17_36239734_36241408_1	chr17	+	731	6	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	11646	1765	11646	-1754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCGGAGGAGGACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	36239733	36241408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183
ENSMUSG00000039220.17_36240350_36241587_1	chr17	+	723	4	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	12262	1586	12262	-1575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGGTGGAAGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	36240349	36241587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36240479_36240664_36240741_36240942_36241057_36241183
ENSMUSG00000039220.17_36240413_36241653_1	chr17	+	726	4	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	12325	1520	12325	-1509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACCACATGATGTCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	36240412	36241653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36240479_36240664_36240741_36240942_36241057_36241183
ENSMUSG00000039220.17_36240989_36242095_1	chr17	+	723	3	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	12901	1078	12901	-1067	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAACAACTGTGCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	36240988	36242095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36241057_36241183_36241784_36242040
ENSMUSG00000039220.17_36241397_36242387_1	chr17	+	734	2	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	13309	786	13309	-775	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCACTCTGTGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	36241396	36242387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36241784_36242040
ENSMUSG00000039220.17_36241538_36242525_1	chr17	+	731	2	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	13450	648	13450	-637	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGGAAACCATCTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	36241537	36242525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36241784_36242040
ENSMUSG00000039221.11_28859618_28860742_1	chr3	+	166	2	ISM	ENSMUSG00000039221.11	ENSMUST00000194649.2	525	4	0	831	0	-822	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTCTTACTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	28859617	28860742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_28859693_28860651
ENSMUSG00000039221.11_28859618_28861443_1	chr3	+	398	4	FSM	ENSMUSG00000039221.11	ENSMUST00000043867.11	552	4	33	121	0	-121	multi-exon	FALSE	canonical	NA	NA	NA	NA	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTCAAGATGAAGATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	28859617	28861443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_28859693_28860648_28860742_28860885_28861008_28861335
ENSMUSG00000039221.11_28859618_28861443_2	chr3	+	392	4	NNC	ENSMUSG00000039221.11	novel	552	4	NA	NA	0	-121	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTCAAGATGAAGATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	28859617	28861443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_28859693_28860648_28860742_28860891_28861008_28861335
ENSMUSG00000039221.11_28860648_28861571_1	chr3	+	446	3	NNC	ENSMUSG00000039221.11	novel	525	4	NA	NA	1030	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATGGTTCATCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	28860647	28861571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_28860742_28860891_28861008_28861335
ENSMUSG00000039221.11_28860648_28861571_2	chr3	+	452	3	ISM	ENSMUSG00000039221.11	ENSMUST00000194649.2	525	4	1030	2	1030	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATGGTTCATCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	28860647	28861571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_28860742_28860885_28861008_28861335
ENSMUSG00000039230.15_121342775_121500916_1	chr11	+	3584	37	ISM	ENSMUSG00000039230.15	ENSMUST00000103013.10	3906	39	0	7074	0	-7074	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTAGGGCCTGCCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	121342774	121500916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469602_121470973_121470997_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806
ENSMUSG00000039230.15_121350222_121507990_2	chr11	+	3580	37	ISM	ENSMUSG00000039230.15	ENSMUST00000103013.10	3906	39	7447	0	7447	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	121350221	121507990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469602_121470973_121470997_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ENSMUSG00000039231.19_7927410_7937134_1	chrX	-	2398	4	ISM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	3363	-264	3363	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCAAGCTGGGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	7937134	7927409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826
ENSMUSG00000039231.19_7927913_7940858_1	chrX	-	2472	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115638.10	3116	6	141	503	110	-239	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCCCCCTGCTTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	7940858	7927912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940782
ENSMUSG00000039231.19_7927974_7940871_1	chrX	-	2424	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115638.10	3116	6	128	564	97	-300	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCCACTTGTCTCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	7940871	7927973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940782
ENSMUSG00000039231.19_7928050_7940968_1	chrX	-	2445	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115638.10	3116	6	31	640	0	-376	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGCCCAGAAAAAAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	7940968	7928049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940782
ENSMUSG00000039233.13_14172672_14194475_1	chr13	-	1379	13	NNC	ENSMUSG00000039233.13	novel	1599	15	NA	NA	-5008	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAACCGTAAGAGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	14194475	14172671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_14172767_14172947_14173040_14175645_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181118_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286
ENSMUSG00000039233.13_14172672_14194475_2	chr13	-	1384	13	ISM	ENSMUSG00000039233.13	ENST00000646624.1	1599	15	9518	0	-5008	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAACCGTAAGAGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	14194475	14172671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14172767_14172947_14173040_14175645_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286
ENSMUSG00000039233.13_14172948_14202369_1	chr13	-	1373	13	ISM	ENSMUSG00000039233.13	ENST00000646624.1	1599	15	1624	276	1624	-276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTTGCTAAGCAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	14202369	14172947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_14173040_14175645_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282
ENSMUSG00000039234.12_123061104_123148734_1	chr3	+	2501	18	ISM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	0	10556	0	-10556	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCGTCTTGCTAATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	123061103	123148734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595
ENSMUSG00000039234.12_123063348_123152530_1	chr3	+	2478	19	ISM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	2244	6760	2209	-6760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGTTGAAAAACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	123063347	123152530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485
ENSMUSG00000039234.12_123072791_123152665_1	chr3	+	2561	18	ISM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	11687	6625	11652	-6625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCATGGGCCCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	123072790	123152665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485
ENSMUSG00000039234.12_123084047_123154519_1	chr3	+	2503	18	ISM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	22943	4771	22908	-4771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCCGACTCTCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	123084046	123154519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468
ENSMUSG00000039234.12_123087226_123156372_1	chr3	+	2568	18	ISM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	26122	2918	26087	-2918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAATGAAAATCTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	123087225	123156372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282
ENSMUSG00000039234.12_123087370_123158545_1	chr3	+	2500	19	ISM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	26266	745	26231	-745	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATCTTCGTACGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	123087369	123158545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ENSMUSG00000039234.12_123087439_123158595_1	chr3	+	2481	19	ISM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	26335	695	26300	-695	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGCTTAACTGAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	123087438	123158595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ENSMUSG00000039234.12_123093272_123158904_1	chr3	+	2526	17	ISM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	32168	386	32133	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGCTTGTTATATAAATT	NA	NA	NA	NA	NA	NA	NA	NA	123093271	123158904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ENSMUSG00000039234.12_123123995_123159285_1	chr3	+	2572	14	ISM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	62891	5	62856	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTTACTGTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	123123994	123159285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ENSMUSG00000039236.19_78563729_78566481_1	chr7	+	516	3	ISM	ENSMUSG00000039236.19	ENSMUST00000038142.15	1083	4	216	3663	216	-3454	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGAGTCTCCCGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	78563728	78566481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_78563791_78564069_78564323_78566280
ENSMUSG00000039236.19_78564234_78570006_1	chr7	+	503	3	FSM	ENSMUSG00000039236.19	ENSMUST00000120331.4	845	3	251	91	157	41	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAACCAAGAACACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	78564233	78570006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_78564323_78566280_78566482_78569793
ENSMUSG00000039238.7_121402644_121403776_1	chr11	-	1006	2	ISM	ENSMUSG00000039238.7	ENST00000572562.1	1252	3	6365	7	6365	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCTGAGGCCTCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	121403776	121402643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121403326_121403452
ENSMUSG00000039238.7_121402829_121410159_1	chr11	-	1078	3	FSM	ENSMUSG00000039238.7	ENST00000572562.1	1252	3	-18	192	0	-192	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACCCGTCAGGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	121410159	121402828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_121403326_121403452_121403930_121410055
ENSMUSG00000039242.11_14150021_14155281_1	chr13	+	295	2	ISM	ENSMUSG00000039242.11	ENST00000404344.2	1087	9	9118	14574	9118	-14574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCTGCAGGGAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	14150020	14155281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_14150220_14155185
ENSMUSG00000039242.11_14150130_14161997_1	chr13	+	246	3	ISM	ENSMUSG00000039242.11	ENST00000404344.2	1087	9	9227	7858	9227	-7858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCACAGAGTGACAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	14150129	14161997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_14150220_14155185_14155282_14161937
ENSMUSG00000039242.11_14155250_14166077_1	chr13	+	244	4	ISM	ENSMUSG00000039242.11	ENST00000404344.2	1087	9	14347	3778	14347	-3778	internal_fragment	TRUE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGATGTTGTGGATACTT	NA	NA	NA	NA	NA	NA	NA	NA	14155249	14166077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_14155282_14161937_14162049_14165373_14165429_14166031
ENSMUSG00000039242.11_14161938_14172350_1	chr13	+	1590	7	ISM	ENSMUSG00000039242.11	ENSMUST00000221300.2	2397	13	32679	1321	21035	-1309	internal_fragment	TRUE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAGCTTAAAGGACATT	NA	NA	NA	NA	NA	NA	NA	NA	14161937	14172350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
ENSMUSG00000039244.11_143287285_143293490_1	chr5	-	634	3	ISM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	7625	323	7625	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTGAGTGACAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	143293490	143287284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143287759_143292520_143292561_143293370
ENSMUSG00000039244.11_143287343_143293554_1	chr5	-	640	3	ISM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	7561	381	7561	-381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCGAGTGGGCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	143293554	143287342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143287759_143292520_143292561_143293370
ENSMUSG00000039244.11_143287402_143293610_1	chr5	-	637	3	ISM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	7505	440	7505	-440	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTGCTGTTTCCGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	143293610	143287401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143287759_143292520_143292561_143293370
ENSMUSG00000039244.11_143292529_143297542_1	chr5	-	634	3	ISM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	3573	5567	3573	-5567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACAAGTAGGTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	143297542	143292528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143292561_143293370_143293896_143297465
ENSMUSG00000039244.11_143293495_143300015_1	chr5	-	650	3	ISM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	1100	6533	1100	-6533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACAGACTAGCAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	143300015	143293494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143293896_143297465_143297632_143299932
ENSMUSG00000039244.11_143293558_143300053_1	chr5	-	625	3	ISM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	1062	6596	1062	-6596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACCTGTACGGGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	143300053	143293557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143293896_143297465_143297632_143299932
ENSMUSG00000039244.11_143293606_143300109_1	chr5	-	633	3	ISM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	1006	6644	1006	-6644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCGTCCTGCAGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	143300109	143293605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143293896_143297465_143297632_143299932
ENSMUSG00000039244.11_143293712_143300710_1	chr5	-	625	4	ISM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	405	6750	405	-6750	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGAAGCCTTGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	143300710	143293711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143293896_143297465_143297632_143299932_143300155_143300657
ENSMUSG00000039244.11_143293766_143300819_1	chr5	-	680	4	ISM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	296	6804	296	-6804	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACCCCTCATTGGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	143300819	143293765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143293896_143297465_143297632_143299932_143300155_143300657
ENSMUSG00000039244.11_143293813_143300841_1	chr5	-	655	4	ISM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	274	6851	274	-6851	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATACTCCCATCGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	143300841	143293812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143293896_143297465_143297632_143299932_143300155_143300657
ENSMUSG00000039244.11_143297535_143300993_1	chr5	-	655	3	ISM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	122	10573	122	-10573	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGCCAGTCCTCGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	143300993	143297534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143297632_143299932_143300155_143300657
ENSMUSG00000039244.11_143299933_143301095_1	chr5	-	660	2	ISM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	20	12971	20	-12971	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGCTCTCGAAATAGCG	NA	NA	NA	NA	NA	NA	NA	NA	143301095	143299932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143300155_143300657
ENSMUSG00000039246.9_185820243_185821685_1	chr1	-	768	2	ISM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	27822	315	27822	-315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGATTTCTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	185821685	185820242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_185820966_185821640
ENSMUSG00000039246.9_185820353_185832448_1	chr1	-	788	3	ISM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	17059	425	17059	-425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTTTAGCACCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	185832448	185820352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_185820966_185821640_185821757_185832389
ENSMUSG00000039246.9_185820569_185846560_1	chr1	-	783	4	ISM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	2947	641	2947	-641	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCATGTAGTGAATGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	185846560	185820568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_185820966_185821640_185821757_185832389_185832560_185846460
ENSMUSG00000039254.17_32127351_32135678_1	chr2	+	1026	9	ISM	ENSMUSG00000039254.17	ENSMUST00000036473.16	2918	20	749	9339	749	-8774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCCCATGATGTAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	32127350	32135678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558
ENSMUSG00000039254.17_32130468_32143907_1	chr2	+	1665	15	ISM	ENSMUSG00000039254.17	ENST00000677626.1	1877	16	30	561	29	-545	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGGCTGTGAAACCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	32130467	32143907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727
ENSMUSG00000039254.17_32130468_32144375_1	chr2	+	2003	18	NNC	ENSMUSG00000039254.17	novel	2110	18	NA	NA	29	-77	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGGACACGTCACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	32130467	32144375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32130546_32130685_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133795_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143728_32143906_32144284
ENSMUSG00000039254.17_32130468_32144375_2	chr2	+	1998	18	NNC	ENSMUSG00000039254.17	novel	2110	18	NA	NA	29	-77	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGGACACGTCACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	32130467	32144375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32130546_32130685_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133795_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143900_32144284
ENSMUSG00000039254.17_32130468_32144375_3	chr2	+	1997	18	NNC	ENSMUSG00000039254.17	novel	2110	18	NA	NA	29	-77	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGGACACGTCACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	32130467	32144375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32130546_32130685_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133795_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141365_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUSG00000039254.17_32130468_32144375_4	chr2	+	1998	18	NNC	ENSMUSG00000039254.17	novel	2110	18	NA	NA	29	-77	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGGACACGTCACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	32130467	32144375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32130546_32130685_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133795_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141927_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUSG00000039254.17_32130468_32144375_5	chr2	+	1997	18	NNC	ENSMUSG00000039254.17	novel	2110	18	NA	NA	29	-77	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGGACACGTCACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	32130467	32144375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32130546_32130685_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133795_32134245_32134402_32135558_32135690_32136033_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUSG00000039254.17_32130468_32144375_6	chr2	+	1999	18	NNC	ENSMUSG00000039254.17	novel	2110	18	NA	NA	29	-77	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGGACACGTCACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	32130467	32144375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32130546_32130685_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133795_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140805_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUSG00000039254.17_32130468_32144375_7	chr2	+	1754	16	FSM	ENSMUSG00000039254.17	ENST00000677626.1	1877	16	30	93	29	-77	multi-exon	FALSE	canonical	NA	NA	NA	NA	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGGACACGTCACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	32130467	32144375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUSG00000039254.17_32130468_32144452_1	chr2	+	2067	17	NNC	ENSMUSG00000039254.17	novel	2110	18	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAGAGAACAAGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	32130467	32144452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32130550_32131640_32131812_32132904_32133017_32133476_32133543_32133630_32133795_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUSG00000039254.17_32130468_32144452_2	chr2	+	2079	18	NNC	ENSMUSG00000039254.17	novel	2110	18	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAGAGAACAAGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	32130467	32144452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32130546_32130685_32130728_32131666_32131812_32132904_32133017_32133476_32133543_32133630_32133795_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUSG00000039254.17_32130468_32144452_3	chr2	+	2080	18	NNC	ENSMUSG00000039254.17	novel	2110	18	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAGAGAACAAGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	32130467	32144452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32130546_32130685_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133795_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138627_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUSG00000039254.17_32130468_32144452_4	chr2	+	2081	18	FSM	ENSMUSG00000039254.17	ENST00000423007.6	2110	18	29	0	29	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAGAGAACAAGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	32130467	32144452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32130546_32130685_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133795_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUSG00000039254.17_32131662_32144452_1	chr2	+	1957	16	NNC	ENSMUSG00000039254.17	novel	2110	18	NA	NA	1223	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAGAGAACAAGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	32131661	32144452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32131812_32132904_32133017_32133476_32133543_32133630_32133795_32134245_32134402_32135558_32135690_32136026_32136123_32137555_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUSG00000039254.17_32131662_32144452_2	chr2	+	1700	14	NNC	ENSMUSG00000039254.17	novel	1877	16	NA	NA	1223	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAGAGAACAAGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	32131661	32144452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32138626_32138724_32140481_32140575_32140805_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUSG00000039254.17_32132904_32140921_1	chr2	+	1060	10	ISM	ENSMUSG00000039254.17	ENSMUST00000036473.16	2918	20	6302	4096	2465	-3531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCATCAAAGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	32132903	32140921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800
ENSMUSG00000039254.17_32140869_32144712_1	chr2	+	998	6	ISM	ENSMUSG00000039254.17	ENST00000677626.1	1877	16	10431	-244	10430	244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAGTGTAGGAACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	32140868	32144712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUSG00000039254.17_32142927_32145017_1	chr2	+	999	3	ISM	ENSMUSG00000039254.17	ENST00000677626.1	1877	16	12489	-549	12488	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATGTTATTTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	32142926	32145017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32143015_32143727_32143906_32144284
ENSMUSG00000039263.17_173952292_173955744_1	chr2	+	486	4	ISM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	150	9119	150	-9119	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTGCAATGAGATGAACACA	NA	NA	NA	NA	NA	NA	NA	NA	173952291	173955744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689
ENSMUSG00000039263.17_173956194_173962422_1	chr2	+	486	5	ISM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	4052	2441	4052	-2441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCATCGTGGACATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	173956193	173962422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336
ENSMUSG00000039263.17_173957892_173962819_1	chr2	+	477	5	ISM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	5750	2044	5750	-2044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGCGGGGACCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	173957891	173962819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_173957987_173961185_173961264_173962019_173962121_173962336_173962461_173962740
ENSMUSG00000039263.17_173957931_173962881_1	chr2	+	500	5	ISM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	5789	1982	5789	-1982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCGGCTGTGGCTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	173957930	173962881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_173957987_173961185_173961264_173962019_173962121_173962336_173962461_173962740
ENSMUSG00000039263.17_173962017_173963382_1	chr2	+	516	4	ISM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	9875	1481	9875	-1481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCCTCAGGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	173962016	173963382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_173962121_173962336_173962461_173962740_173962918_173963271
ENSMUSG00000039263.17_173962362_173963991_1	chr2	+	495	4	ISM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	10220	872	10220	-872	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGGAAGGCGACAACAT	NA	NA	NA	NA	NA	NA	NA	NA	173962361	173963991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_173962461_173962740_173962918_173963271_173963383_173963883
ENSMUSG00000039263.17_173962438_173964059_1	chr2	+	487	4	ISM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	10296	804	10296	-804	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGACACAGGGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	173962437	173964059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_173962461_173962740_173962918_173963271_173963383_173963883
ENSMUSG00000039263.17_173962879_173964206_1	chr2	+	473	3	ISM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	10737	657	10737	-657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGGTGGGGTCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	173962878	173964206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_173962918_173963271_173963383_173963883
ENSMUSG00000039263.17_173963352_173964337_1	chr2	+	485	2	ISM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	11210	526	11210	-526	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCCTTGCTCAAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	173963351	173964337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_173963383_173963883
ENSMUSG00000039285.13_117876608_117880489_1	chr9	+	388	4	ISM	ENSMUSG00000039285.13	ENSMUST00000134433.8	2499	7	6961	9063	6961	-9063	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTTTGGAGCAAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	117876607	117880489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_117876702_117878377_117878504_117878964_117879065_117880421
ENSMUSG00000039285.13_117876654_117880544_1	chr9	+	397	4	ISM	ENSMUSG00000039285.13	ENSMUST00000134433.8	2499	7	7007	9008	7007	-9008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCTGCAGAAGGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	117876653	117880544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_117876702_117878377_117878504_117878964_117879065_117880421
ENSMUSG00000039285.13_117880543_117890952_1	chr9	+	413	4	ISM	ENSMUSG00000039285.13	ENSMUST00000133580.8	2156	8	10918	855	10896	-855	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTCTTCAGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	117880542	117890952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_117880571_117884883_117884979_117888124_117888244_117890781
ENSMUSG00000039285.13_117888124_117891084_1	chr9	+	427	2	NNC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	18477	-723	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGAGACAGCATTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	117888123	117891084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_117888248_117890781
ENSMUSG00000039286.13_27480235_27505559_1	chr3	-	553	4	ISM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	258988	9924	258988	-9924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCTACGTTCTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	27505559	27480234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_27480311_27483012_27483180_27494106_27494320_27505462
ENSMUSG00000039286.13_27483115_27505713_1	chr3	-	529	3	ISM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	258834	12804	258834	-12804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTCCTTCAGGATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	27505713	27483114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_27483180_27494106_27494320_27505462
ENSMUSG00000039286.13_27494277_27511208_1	chr3	-	547	4	ISM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	253339	23966	253339	-23966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCAGTTCATTAAAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	27511208	27494276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_27494320_27505462_27505744_27510597_27510748_27511135
ENSMUSG00000039286.13_27505595_27513013_1	chr3	-	561	4	ISM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	251534	35284	251534	-35284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGGGAAGAGCCGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	27513013	27505594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_27505744_27510597_27510748_27511135_27511250_27512865
ENSMUSG00000039286.13_27512912_27519980_1	chr3	-	554	5	ISM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	244567	42601	244567	-42601	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTGTGTACCGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	27519980	27512911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850
ENSMUSG00000039286.13_27519938_27545237_1	chr3	-	557	6	ISM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	219310	49627	219310	-49627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAACCAGCCCCGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	27545237	27519937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173
ENSMUSG00000039286.13_27523113_27555619_1	chr3	-	532	6	ISM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	208928	52802	208928	-52802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGCGTCACCTGGATCACC	NA	NA	NA	NA	NA	NA	NA	NA	27555619	27523112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542
ENSMUSG00000039286.13_27545220_27592269_1	chr3	-	536	5	ISM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	172278	74909	172278	-74909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTGGCACACAGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	27592269	27545219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097
ENSMUSG00000039286.13_27555584_27596159_1	chr3	-	541	4	ISM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	168388	85273	168388	-85273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGACAAAGGGCGAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	27596159	27555583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_27555695_27562629_27562689_27592097_27592389_27596079
ENSMUSG00000039286.13_27592309_27697165_1	chr3	-	543	5	ISM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	67382	121998	67382	-121998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGCCAGATCGACCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	27697165	27592308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099
ENSMUSG00000039286.13_27592347_27697238_1	chr3	-	578	5	ISM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	67309	122036	67309	-122036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCAGTACAGCAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	27697238	27592346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099
ENSMUSG00000039286.13_27596204_27765402_1	chr3	-	553	5	NIC	ENSMUSG00000039286.13	novel	7024	26	NA	NA	57	-125893	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATCCACACTTCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	27765402	27596203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_-_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27765261
ENSMUSG00000039294.15_121114935_121115425_1	chr11	-	175	2	ISM	ENSMUSG00000039294.15	ENST00000434650.6	525	5	3813	0	3813	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGACTGGCTGCAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	121115425	121114934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121115059_121115374
ENSMUSG00000039294.15_121115052_121115521_1	chr11	-	154	2	ISM	ENSMUSG00000039294.15	ENST00000434650.6	525	5	3717	117	3717	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCATTGCCAAACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	121115521	121115051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121115059_121115374
ENSMUSG00000039294.15_121116630_121119191_2	chr11	-	209	3	ISM	ENSMUSG00000039294.15	ENST00000434650.6	525	5	47	1695	47	-1695	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACGTGGGGACCTACA	NA	NA	NA	NA	NA	NA	NA	NA	121119191	121116629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_121116727_121117594_121117669_121119153
ENSMUSG00000039323.19_72863859_72888776_1	chr1	+	546	3	ISM	ENSMUSG00000039323.19	ENSMUST00000047328.11	1307	4	197	2857	197	-2850	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGGATGATCGGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	72863858	72888776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72864124_72888244_72888472_72888722
ENSMUSG00000039323.19_72863963_72891204_1	chr1	+	577	4	FSM	ENSMUSG00000039323.19	ENSMUST00000047328.11	1307	4	301	429	301	-422	multi-exon	FALSE	canonical	NA	NA	NA	NA	2212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATACCGGGAAGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	72863962	72891204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_72864124_72888244_72888472_72888722_72888864_72891156
ENSMUSG00000039323.19_72864031_72891307_1	chr1	+	612	4	FSM	ENSMUSG00000039323.19	ENSMUST00000047328.11	1307	4	369	326	369	-319	multi-exon	FALSE	canonical	NA	NA	NA	NA	2556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTGCAGTAAACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	72864030	72891307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_72864124_72888244_72888472_72888722_72888864_72891156
ENSMUSG00000039323.19_72864078_72891307_1	chr1	+	565	4	FSM	ENSMUSG00000039323.19	ENSMUST00000047328.11	1307	4	416	326	-403	-319	multi-exon	FALSE	canonical	NA	NA	NA	NA	1829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTGCAGTAAACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	72864077	72891307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_72864124_72888244_72888472_72888722_72888864_72891156
ENSMUSG00000039323.19_72888361_72891428_1	chr1	+	524	3	ISM	ENSMUSG00000039323.19	ENSMUST00000120564.2	991	4	23880	198	23880	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTGGAAAGAGACCAACAC	NA	NA	NA	NA	NA	NA	NA	NA	72888360	72891428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72888472_72888722_72888864_72891156
ENSMUSG00000039323.19_72888722_72891633_1	chr1	+	619	2	ISM	ENSMUSG00000039323.19	ENSMUST00000120564.2	991	4	24241	-7	24241	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTCTTACTTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	72888721	72891633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72888864_72891156
ENSMUSG00000039342.6_72682374_72691588_1	chr1	-	819	7	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	46622	143	46622	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACACAAGGCCAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	72691588	72682373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72682471_72684082_72684130_72686152_72686350_72689280_72689391_72690090_72690209_72690854_72691014_72691497
ENSMUSG00000039342.6_72686212_72697588_1	chr1	-	774	7	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	40622	3981	40622	-3981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTGCATTCCTAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	72697588	72686211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72686350_72689280_72689391_72690090_72690209_72690854_72691014_72691497_72691621_72695265_72695373_72697569
ENSMUSG00000039342.6_72686250_72697668_1	chr1	-	816	7	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	40542	4019	40542	-4019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCGCATCACAAATAACATC	NA	NA	NA	NA	NA	NA	NA	NA	72697668	72686249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72686350_72689280_72689391_72690090_72690209_72690854_72691014_72691497_72691621_72695265_72695373_72697569
ENSMUSG00000039342.6_72686323_72697696_1	chr1	-	771	7	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	40514	4092	40514	-4092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTACCTCACTTACAATGC	NA	NA	NA	NA	NA	NA	NA	NA	72697696	72686322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72686350_72689280_72689391_72690090_72690209_72690854_72691014_72691497_72691621_72695265_72695373_72697569
ENSMUSG00000039342.6_72690147_72698197_1	chr1	-	828	7	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	40013	7916	40013	-7916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATCTTAGCTGACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	72698197	72690146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72690209_72690854_72691014_72691497_72691621_72695265_72695373_72697569_72697732_72697808_72697963_72698136
ENSMUSG00000039342.6_72691559_72704333_1	chr1	-	814	6	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	33877	9328	33877	-9328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAATGATGAAGGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	72704333	72691558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72691621_72695265_72695373_72697569_72697732_72697808_72697963_72698136_72698379_72704246
ENSMUSG00000039342.6_72697621_72705626_1	chr1	-	799	5	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	32584	15390	32584	-15390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGGCACACTTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	72705626	72697620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72697732_72697808_72697963_72698136_72698379_72704246_72704416_72705503
ENSMUSG00000039342.6_72697657_72705696_1	chr1	-	833	5	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	32514	15426	32514	-15426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCACTGGTTCGCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	72705696	72697656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72697732_72697808_72697963_72698136_72698379_72704246_72704416_72705503
ENSMUSG00000039342.6_72698139_72713198_1	chr1	-	825	5	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	25012	15908	25012	-15908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAGAGATTTTATCATTA	NA	NA	NA	NA	NA	NA	NA	NA	72713198	72698138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72698379_72704246_72704416_72705503_72705746_72709250_72709356_72713129
ENSMUSG00000039342.6_72698208_72713235_1	chr1	-	793	5	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	24975	15977	24975	-15977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCAACCCTTTAATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	72713235	72698207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72698379_72704246_72704416_72705503_72705746_72709250_72709356_72713129
ENSMUSG00000039342.6_72704292_72714983_1	chr1	-	836	5	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	23227	22061	23227	-22061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGGCATCCAGTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	72714983	72704291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72704416_72705503_72705746_72709250_72709356_72713129_72713339_72714827
ENSMUSG00000039342.6_72705573_72719230_1	chr1	-	780	5	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	18980	23342	18980	-23342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTCGCTGTGCTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	72719230	72705572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72705746_72709250_72709356_72713129_72713339_72714827_72715030_72719139
ENSMUSG00000039342.6_72705630_72719291_1	chr1	-	784	5	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	18919	23399	18919	-23399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCAGGAGGCATTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	72719291	72705629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72705746_72709250_72709356_72713129_72713339_72714827_72715030_72719139
ENSMUSG00000039342.6_72705692_72719330_1	chr1	-	761	5	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	18880	23461	18880	-23461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAACCGTTGGGTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	72719330	72705691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72705746_72709250_72709356_72713129_72713339_72714827_72715030_72719139
ENSMUSG00000039342.6_72713130_72726993_1	chr1	-	922	5	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	11217	30899	11217	-30899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATAGAACATGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	72726993	72713129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72713339_72714827_72715030_72719139_72719360_72720968_72721150_72726883
ENSMUSG00000039342.6_72713275_72726993_1	chr1	-	777	5	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	11217	31044	11217	-31044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTTGGTGCGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	72726993	72713274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72713339_72714827_72715030_72719139_72719360_72720968_72721150_72726883
ENSMUSG00000039342.6_72714942_72729187_1	chr1	-	840	6	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	9023	32711	9023	-32711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGAGGGGCTGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	72729187	72714941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72715030_72719139_72719360_72720968_72721150_72726883_72726988_72727708_72727873_72729104
ENSMUSG00000039342.6_72714993_72729244_1	chr1	-	846	6	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	8966	32762	8966	-32762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGAAGCAACCATCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	72729244	72714992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72715030_72719139_72719360_72720968_72721150_72726883_72726988_72727708_72727873_72729104
ENSMUSG00000039342.6_72719215_72729423_1	chr1	-	913	5	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	8787	36984	8787	-36984	internal_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTCTGTCATATGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	72729423	72719214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72719360_72720968_72721150_72726883_72726988_72727708_72727873_72729104
ENSMUSG00000039342.6_72721089_72737655_1	chr1	-	843	5	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	555	38858	555	-38858	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGTAGCCATAAATGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	72737655	72721088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72721150_72726883_72726988_72727708_72727873_72729104_72729543_72737579
ENSMUSG00000039342.6_72726945_72737759_1	chr1	-	825	4	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	451	44714	451	-44714	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGATGCGGGATACAAA	NA	NA	NA	NA	NA	NA	NA	NA	72737759	72726944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72726988_72727708_72727873_72729104_72729543_72737579
ENSMUSG00000039342.6_72727819_72737869_1	chr1	-	782	3	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	341	45588	341	-45588	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGCCAGAATTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	72737869	72727818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72727873_72729104_72729543_72737579
ENSMUSG00000039342.6_72729158_72737975_1	chr1	-	781	2	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	235	46927	235	-46927	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGAAGATGAAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	72737975	72729157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72729543_72737579
ENSMUSG00000039342.6_72729273_72738062_1	chr1	-	753	2	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	148	47042	148	-47042	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTGTATCTTCAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	72738062	72729272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72729543_72737579
ENSMUSG00000039342.6_72729273_72738145_1	chr1	-	836	2	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	65	47042	65	-47042	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTGTATCTTCAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	72738145	72729272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_72729543_72737579
ENSMUSG00000039354.17_72622410_72636628_1	chr1	+	1548	7	ISM	ENSMUSG00000039354.17	ENSMUST00000047615.15	3059	17	0	35665	0	-35665	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGGAATGGCCACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	72622409	72636628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72622598_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537
ENSMUSG00000039354.17_72625245_72652107_1	chr1	+	1478	10	ISM	ENSMUSG00000039354.17	ENSMUST00000152225.2	2994	17	2471	20186	2471	-20186	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCCTGGTCGGATCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	72625244	72652107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967
ENSMUSG00000039354.17_72625456_72659264_1	chr1	+	1488	12	ISM	ENSMUSG00000039354.17	ENSMUST00000152225.2	2994	17	2682	13029	2682	-13029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTTGCCAAGGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	72625455	72659264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190
ENSMUSG00000039354.17_72630222_72665804_1	chr1	+	1541	11	ISM	ENSMUSG00000039354.17	ENSMUST00000152225.2	2994	17	7448	6489	7448	-6489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGGAATGTAGCTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	72630221	72665804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621
ENSMUSG00000039354.17_72630330_72667333_1	chr1	+	1507	12	ISM	ENSMUSG00000039354.17	ENSMUST00000152225.2	2994	17	7556	4960	7556	-4960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGCACAGCAGATGACT	NA	NA	NA	NA	NA	NA	NA	NA	72630329	72667333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259
ENSMUSG00000039354.17_72635007_72672049_1	chr1	+	1485	12	ISM	ENSMUSG00000039354.17	ENSMUST00000152225.2	2994	17	12233	244	12233	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGAAGCAGCAGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	72635006	72672049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ENSMUSG00000039354.17_72636583_72672293_1	chr1	+	1557	11	ISM	ENSMUSG00000039354.17	ENSMUST00000152225.2	2994	17	13809	0	13809	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTATTCCGTTTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	72636582	72672293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ENSMUSG00000039356.16_31562483_31568472_1	chr2	+	384	6	ISM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	1756	2889	1743	-2112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTAGTCCAGGTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	31562482	31568472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31562586_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462
ENSMUSG00000039356.16_31562523_31568553_1	chr2	+	401	6	ISM	ENSMUSG00000039356.16	ENST00000372352.7	872	9	1783	2031	1783	-2031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAACAACGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	31562522	31568553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31562586_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568486
ENSMUSG00000039356.16_31564524_31568639_1	chr2	+	451	5	ISM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	3797	2722	3784	-1945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGAACATCATCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	31564523	31568639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462
ENSMUSG00000039356.16_31565850_31569991_1	chr2	+	418	4	ISM	ENSMUSG00000039356.16	ENST00000372352.7	872	9	5110	593	5110	-593	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCCAGACTCCTCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	31565849	31569991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31565917_31566679_31566749_31568486_31568640_31569862
ENSMUSG00000039356.16_31566680_31570584_1	chr2	+	458	4	ISM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	5953	777	5940	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGAGCTGAAGGATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	31566679	31570584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31566749_31568462_31568640_31569862_31569992_31570501
ENSMUSG00000039356.16_31566680_31570584_2	chr2	+	434	4	ISM	ENSMUSG00000039356.16	ENST00000372352.7	872	9	5940	0	5940	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGAGCTGAAGGATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	31566679	31570584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31566749_31568486_31568640_31569862_31569992_31570501
ENSMUSG00000039356.16_31569895_31570836_1	chr2	+	432	2	ISM	ENSMUSG00000039356.16	ENST00000372352.7	872	9	9155	-252	9155	252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGAATTTATGACTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	31569894	31570836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31569992_31570501
ENSMUSG00000039357.3_20745149_20746378_1	chr14	+	1141	2	ISM	ENSMUSG00000039357.3	ENSMUST00000048016.3	4163	3	113	4706	113	-4706	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCCTGTCCCCGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	20745148	20746378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20745767_20745855
ENSMUSG00000039357.3_20745400_20748429_1	chr14	+	1144	3	FSM	ENSMUSG00000039357.3	ENSMUST00000048016.3	4163	3	364	2655	364	-2655	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATGTAAGAGCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	20745399	20748429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_20745767_20745855_20746482_20748278
ENSMUSG00000039357.3_20745655_20748682_1	chr14	+	1142	3	FSM	ENSMUSG00000039357.3	ENSMUST00000048016.3	4163	3	619	2402	619	-2402	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGACTCAAGTACACTT	NA	NA	NA	NA	NA	NA	NA	NA	20745654	20748682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_20745767_20745855_20746482_20748278
ENSMUSG00000039357.3_20745931_20748864_1	chr14	+	1137	2	ISM	ENSMUSG00000039357.3	ENSMUST00000048016.3	4163	3	895	2220	895	-2220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTCTGCCTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	20745930	20748864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20746482_20748278
ENSMUSG00000039357.3_20746297_20749266_1	chr14	+	1173	2	ISM	ENSMUSG00000039357.3	ENSMUST00000048016.3	4163	3	1261	1818	1261	-1818	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCCACATTCTCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	20746296	20749266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20746482_20748278
ENSMUSG00000039361.12_89779724_89825521_1	chr7	+	909	9	ISM	ENSMUSG00000039361.12	ENST00000630913.2	2246	19	92	31498	0	-31498	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCACTGGCCTATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	89779723	89825521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_89779911_89809655_89809799_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486
ENSMUSG00000039361.12_89779724_89825584_1	chr7	+	972	9	ISM	ENSMUSG00000039361.12	ENST00000630913.2	2246	19	92	31435	0	-31435	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGCTCGTTTAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	89779723	89825584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_89779911_89809655_89809799_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486
ENSMUSG00000039361.12_89809656_89846214_1	chr7	+	1779	18	ISM	ENSMUSG00000039361.12	ENST00000526033.5	3592	20	30200	11920	29932	-10805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGGAGCACAGGTACTA	NA	NA	NA	NA	NA	NA	NA	NA	89809655	89846214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831447_89831577_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123
ENSMUSG00000039361.12_89809733_89826762_1	chr7	+	926	10	ISM	ENSMUSG00000039361.12	ENST00000630913.2	2246	19	30101	30257	30009	-30257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCACGCCATGTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	89809732	89826762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_89809799_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707
ENSMUSG00000039361.12_89814721_89831484_1	chr7	+	968	10	ISM	ENSMUSG00000039361.12	ENST00000630913.2	2246	19	35089	25535	34997	-25535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCACAAAAAGTAGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	89814720	89831484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426
ENSMUSG00000039361.12_89819800_89857149_1	chr7	+	1723	15	ISM	ENSMUSG00000039361.12	ENST00000526033.5	3592	20	40344	985	40076	130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTGTCCTTTACCATAG	NA	NA	NA	NA	NA	NA	NA	NA	89819799	89857149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831447_89831577_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ENSMUSG00000039361.12_89819818_89838424_1	chr7	+	898	9	ISM	ENSMUSG00000039361.12	ENST00000630913.2	2246	19	40186	18595	40094	-18595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGGAAATAAATCTACGA	NA	NA	NA	NA	NA	NA	NA	NA	89819817	89838424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357
ENSMUSG00000039361.12_89821458_89840480_1	chr7	+	974	9	ISM	ENSMUSG00000039361.12	ENST00000630913.2	2246	19	41826	16539	41734	-16539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTAGTCCTTTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	89821457	89840480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840348
ENSMUSG00000039361.12_89825518_89857494_1	chr7	+	1703	11	ISM	ENSMUSG00000039361.12	ENST00000526033.5	3592	20	46062	640	45794	475	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGGTCTGAATCTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	89825517	89857494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_89825611_89825866_89826004_89826707_89826812_89831447_89831577_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ENSMUSG00000039361.12_89825566_89846214_1	chr7	+	958	10	ISM	ENSMUSG00000039361.12	ENST00000630913.2	2246	19	45934	10805	45842	-10805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGGAGCACAGGTACTA	NA	NA	NA	NA	NA	NA	NA	NA	89825565	89846214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123
ENSMUSG00000039361.12_89825941_89856845_1	chr7	+	908	10	ISM	ENSMUSG00000039361.12	ENST00000630913.2	2246	19	46309	174	46217	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGCGGCAACTCCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	89825940	89856845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ENSMUSG00000039361.12_89826749_89856946_1	chr7	+	905	9	ISM	ENSMUSG00000039361.12	ENST00000630913.2	2246	19	47117	73	47025	-73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGACTAGTTTATAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	89826748	89856946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_89826812_89831426_89831577_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ENSMUSG00000039361.12_89838406_89858010_1	chr7	+	1708	7	ISM	ENSMUSG00000039361.12	ENSMUST00000208742.2	3361	20	58694	128	58682	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAATTCTGTACATGAG	NA	NA	NA	NA	NA	NA	NA	NA	89838405	89858010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ENSMUSG00000039361.12_89840379_89858138_1	chr7	+	1746	6	ISM	ENSMUSG00000039361.12	ENSMUST00000208742.2	3361	20	60667	0	60655	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTACGGTGTTCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	89840378	89858138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ENSMUSG00000039367.12_20724422_20744052_1	chr14	+	3547	23	FSM	ENSMUSG00000039367.12	ENSMUST00000048657.10	4461	23	46	868	11	-855	multi-exon	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATCGAAGGTGCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	20724421	20744052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ENSMUSG00000039367.12_20725876_20736678_1	chr14	+	1175	7	ISM	ENSMUSG00000039367.12	ENST00000339365.2	4502	24	1466	8229	1465	-8229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACCAAGGTGAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	20725875	20736678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20725928_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576
ENSMUSG00000039367.12_20726172_20744245_1	chr14	+	3559	22	ISM	ENSMUSG00000039367.12	ENST00000339365.2	4502	24	1762	662	1761	-662	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATTACAGGAGGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	20726171	20744245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ENSMUSG00000039367.12_20729683_20744376_1	chr14	+	3549	21	ISM	ENSMUSG00000039367.12	ENST00000339365.2	4502	24	5273	531	5272	-531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCTGATGGTCAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	20729682	20744376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ENSMUSG00000039367.12_20732888_20744519_1	chr14	+	3502	20	ISM	ENSMUSG00000039367.12	ENST00000339365.2	4502	24	8478	388	8477	-388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAACACCTTGGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	20732887	20744519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ENSMUSG00000039367.12_20732888_20744572_1	chr14	+	3555	20	ISM	ENSMUSG00000039367.12	ENST00000339365.2	4502	24	8478	335	8477	-335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGATGGTTCTGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	20732887	20744572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ENSMUSG00000039367.12_20733292_20744738_1	chr14	+	3553	19	ISM	ENSMUSG00000039367.12	ENST00000339365.2	4502	24	8882	169	8881	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGACAAGTTATCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	20733291	20744738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ENSMUSG00000039367.12_20733365_20744918_1	chr14	+	3660	19	ISM	ENSMUSG00000039367.12	ENST00000339365.2	4502	24	8955	-11	8954	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	NA	NA	NA	NA	NA	NA	NA	20733364	20744918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ENSMUSG00000039367.12_20733440_20744918_1	chr14	+	3585	19	ISM	ENSMUSG00000039367.12	ENST00000339365.2	4502	24	9030	-11	9029	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	NA	NA	NA	NA	NA	NA	NA	20733439	20744918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ENSMUSG00000039375.17_55082826_55092481_1	chr8	-	551	5	ISM	ENSMUSG00000039375.17	ENST00000508596.6	4136	28	56953	276	56953	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATTTTTTTCTGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	55092481	55082825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_55082946_55085347_55085532_55088479_55088579_55091321_55091424_55092435
ENSMUSG00000039375.17_55092491_55102212_1	chr8	-	511	5	ISM	ENSMUSG00000039375.17	ENST00000507824.6	3915	29	54740	9665	47222	-9665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACCTGATGAGTTATATC	NA	NA	NA	NA	NA	NA	NA	NA	55102212	55092490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_55092539_55092870_55093013_55096148_55096285_55101254_55101395_55102167
ENSMUSG00000039375.17_55092938_55104387_1	chr8	-	517	5	ISM	ENSMUSG00000039375.17	ENST00000507824.6	3915	29	52565	10112	45047	-10112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGTATTATTTACTAAG	NA	NA	NA	NA	NA	NA	NA	NA	55104387	55092937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_55093013_55096148_55096285_55101254_55101395_55102167_55102268_55104321
ENSMUSG00000039375.17_55126702_55140761_1	chr8	-	541	4	ISM	ENSMUSG00000039375.17	ENST00000508596.6	4136	28	8673	44152	8673	13673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACCTGATGATCCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	55140761	55126701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_55126734_55134380_55134566_55138430_55138554_55140560
ENSMUSG00000039375.17_55134380_55143084_1	chr8	-	556	4	ISM	ENSMUSG00000039375.17	ENST00000507824.6	3915	29	13868	51554	6350	5995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCCTCTCATTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	55143084	55134379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_55134566_55138430_55138554_55140560_55140762_55143038
ENSMUSG00000039375.17_55138431_55143269_1	chr8	-	555	3	ISM	ENSMUSG00000039375.17	ENST00000507824.6	3915	29	13683	55605	6165	1944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAGTAAAAATATAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	55143269	55138430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_55138554_55140560_55140762_55143038
ENSMUSG00000039375.17_55140707_55149340_1	chr8	-	507	4	ISM	ENSMUSG00000039375.17	ENST00000507824.6	3915	29	7612	57881	94	-332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGCTAATTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	55149340	55140706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_55140762_55143038_55143270_55146091_55146276_55149303
ENSMUSG00000039377.8_184459636_184464409_1	chr1	-	1572	4	FSM	ENSMUSG00000039377.8	ENSMUST00000048572.7	2278	4	407	299	407	-299	multi-exon	TRUE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGTTGCCTAGATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	184464409	184459635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_184460189_184462056_184462242_184462887_184463068_184463755
ENSMUSG00000039384.9_183766578_183807093_1	chr1	+	2052	4	FSM	ENSMUSG00000039384.9	ENSMUST00000048655.8	2792	4	0	740	0	-740	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGCTTATTGTAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	183766577	183807093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_183766767_183768997_183769850_183801048_183801421_183806454
ENSMUSG00000039384.9_183766578_183807143_1	chr1	+	2102	4	FSM	ENSMUSG00000039384.9	ENSMUST00000048655.8	2792	4	0	690	0	-690	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAAGATACCACCCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	183766577	183807143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_183766767_183768997_183769850_183801048_183801421_183806454
ENSMUSG00000039384.9_183766578_183807224_1	chr1	+	2183	4	FSM	ENSMUSG00000039384.9	ENSMUST00000048655.8	2792	4	0	609	0	-609	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAGCAAACCCTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	183766577	183807224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_183766767_183768997_183769850_183801048_183801421_183806454
ENSMUSG00000039384.9_183768998_183807366_1	chr1	+	2136	3	ISM	ENSMUSG00000039384.9	ENSMUST00000048655.8	2792	4	2420	467	2420	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTCCCCTTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	183768997	183807366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_183769850_183801048_183801421_183806454
ENSMUSG00000039384.9_183769192_183807366_1	chr1	+	1942	3	ISM	ENSMUSG00000039384.9	ENSMUST00000048655.8	2792	4	2614	467	2614	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTCCCCTTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	183769191	183807366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_183769850_183801048_183801421_183806454
ENSMUSG00000039384.9_183769431_183807689_1	chr1	+	2026	3	ISM	ENSMUSG00000039384.9	ENSMUST00000048655.8	2792	4	2853	144	2853	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATGTAAAAAAACAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	183769430	183807689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_183769850_183801048_183801421_183806454
ENSMUSG00000039391.12_89515706_89535391_1	chr7	-	982	8	ISM	ENSMUSG00000039391.12	ENST00000528728.1	1192	9	1622	0	1622	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTGAACCTACTATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	89535391	89515705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89515855_89518828_89518955_89524882_89525104_89525296_89525376_89526611_89526785_89529335_89529441_89531499_89531591_89535353
ENSMUSG00000039391.12_89515829_89535391_1	chr7	-	859	8	ISM	ENSMUSG00000039391.12	ENST00000528728.1	1192	9	1622	123	1622	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGTGTGAGAAGTATCGG	NA	NA	NA	NA	NA	NA	NA	NA	89535391	89515828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89515855_89518828_89518955_89524882_89525104_89525296_89525376_89526611_89526785_89529335_89529441_89531499_89531591_89535353
ENSMUSG00000039391.12_89518828_89536943_1	chr7	-	974	8	ISM	ENSMUSG00000039391.12	ENST00000528728.1	1192	9	70	3122	70	-3122	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1008	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACCTAATGGGATCCAC	NA	NA	NA	NA	NA	NA	NA	NA	89536943	89518827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89518955_89524882_89525104_89525296_89525376_89526611_89526785_89529335_89529441_89531499_89531591_89535353_89535478_89536889
ENSMUSG00000039391.12_89529337_89530851_1	chr7	-	134	2	ISM	ENSMUSG00000039391.12	ENST00000354755.5	2099	14	22014	13631	6162	-13631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTCTCGTTAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	89530851	89529336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89529441_89530821
ENSMUSG00000039391.12_89529382_89530907_1	chr7	-	145	2	ISM	ENSMUSG00000039391.12	ENST00000354755.5	2099	14	21958	13676	6106	-13676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAAGCTATCAGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	89530907	89529381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89529441_89530821
ENSMUSG00000039391.12_89535463_89537013_1	chr7	-	139	2	ISM	ENSMUSG00000039391.12	ENST00000528728.1	1192	9	0	19757	0	-19757	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACACCGTGAGAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	89537013	89535462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89535478_89536889
ENSMUSG00000039391.12_89536924_89539649_1	chr7	-	138	2	ISM	ENSMUSG00000039391.12	ENST00000354755.5	2099	14	13216	21218	-2636	-21218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGACCAGTCAGACAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	89539649	89536923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89537012_89539599
ENSMUSG00000039391.12_89539627_89546000_1	chr7	-	136	2	ISM	ENSMUSG00000039391.12	ENST00000354755.5	2099	14	6865	23921	6826	-23921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAACAGTGCGATGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	89546000	89539626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89539680_89545917
ENSMUSG00000039391.12_89546031_89552444_1	chr7	-	148	3	ISM	ENSMUSG00000039391.12	ENST00000354755.5	2099	14	421	30325	382	-30325	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAGGCAGCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	89552444	89546030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89546062_89547245_89547308_89552389
ENSMUSG00000039396.12_54039902_54091887_1	chr8	-	2040	10	FSM	ENSMUSG00000039396.12	ENSMUST00000047768.11	2253	10	213	0	213	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTTGTAAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	54091887	54039901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_54040363_54041959_54042135_54052133_54052555_54053985_54054156_54058667_54058835_54060362_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
ENSMUSG00000039396.12_54039902_54092001_1	chr8	-	2154	10	FSM	ENSMUSG00000039396.12	ENSMUST00000047768.11	2253	10	99	0	99	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTTGTAAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	54092001	54039901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_54040363_54041959_54042135_54052133_54052555_54053985_54054156_54058667_54058835_54060362_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
ENSMUSG00000039405.8_89158573_89166724_1	chr7	-	1576	2	FSM	ENSMUSG00000039405.8	ENSMUST00000041761.7	3228	2	70	1582	70	-262	multi-exon	FALSE	canonical	NA	NA	NA	NA	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGTATATGTATATGT	NA	NA	NA	NA	NA	NA	NA	NA	89166724	89158572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_89160079_89166654
ENSMUSG00000039405.8_89158622_89166741_1	chr7	-	1544	2	FSM	ENSMUSG00000039405.8	ENSMUST00000041761.7	3228	2	53	1631	53	-311	multi-exon	FALSE	canonical	NA	NA	NA	NA	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGAGGTTTATATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	89166741	89158621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_89160079_89166654
ENSMUSG00000039405.8_89158675_89166794_1	chr7	-	1544	2	FSM	ENSMUSG00000039405.8	ENSMUST00000041761.7	3228	2	0	1684	0	-364	multi-exon	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTAAACTTTCAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	89166794	89158674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_89160079_89166654
ENSMUSG00000039405.8_89159215_89176395_1	chr7	-	1033	2	FSM	ENSMUSG00000039405.8	ENSMUST00000207932.2	1937	2	0	904	0	-904	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCGGCAATTTGGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	89176395	89159214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_89160079_89176226
ENSMUSG00000039414.11_79058105_79062829_1	chr17	-	594	3	ISM	ENSMUSG00000039414.11	ENST00000233099.6	6336	36	78845	0	13664	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTTGATACACCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	79062829	79058104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79058203_79060459_79060766_79062639
ENSMUSG00000039414.11_79060465_79064433_1	chr17	-	657	3	ISM	ENSMUSG00000039414.11	ENSMUST00000233850.2	2158	10	12060	103	12060	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGTGCTTTTCCGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	79064433	79060464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79060766_79062639_79062854_79064291
ENSMUSG00000039414.11_79060568_79067942_1	chr17	-	662	4	ISM	ENSMUSG00000039414.11	ENSMUST00000233850.2	2158	10	8551	206	8551	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGTCCGAGCAAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	79067942	79060567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79060766_79062639_79062854_79064291_79064444_79067844
ENSMUSG00000039414.11_79060680_79068069_1	chr17	-	677	4	ISM	ENSMUSG00000039414.11	ENSMUST00000233850.2	2158	10	8424	318	8424	-318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATCTTCATGAGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	79068069	79060679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79060766_79062639_79062854_79064291_79064444_79067844
ENSMUSG00000039414.11_79062667_79069527_1	chr17	-	663	4	ISM	ENSMUSG00000039414.11	ENSMUST00000233850.2	2158	10	6966	2305	6966	-2305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGCTCTTGGGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	79069527	79062666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79062854_79064291_79064444_79067844_79068070_79069428
ENSMUSG00000039414.11_79062712_79069587_1	chr17	-	678	4	ISM	ENSMUSG00000039414.11	ENSMUST00000233850.2	2158	10	6906	2350	6906	-2350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAACTTTTGGCTGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	79069587	79062711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79062854_79064291_79064444_79067844_79068070_79069428
ENSMUSG00000039414.11_79062756_79069645_1	chr17	-	692	4	ISM	ENSMUSG00000039414.11	ENSMUST00000233850.2	2158	10	6848	2394	6848	-2394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGCTGAAAGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	79069645	79062755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79062854_79064291_79064444_79067844_79068070_79069428
ENSMUSG00000039414.11_79064315_79070427_1	chr17	-	687	4	ISM	ENSMUSG00000039414.11	ENSMUST00000233850.2	2158	10	6066	3953	6066	-3953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAACTCGTGTGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	79070427	79064314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79064444_79067844_79068070_79069428_79069696_79070361
ENSMUSG00000039414.11_79068001_79074357_1	chr17	-	658	5	ISM	ENSMUSG00000039414.11	ENSMUST00000233850.2	2158	10	2136	7639	2136	-7639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGGACAACCAGGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	79074357	79068000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79068070_79069428_79069696_79070361_79070507_79072756_79072885_79074308
ENSMUSG00000039414.11_79069459_79074463_1	chr17	-	665	4	ISM	ENSMUSG00000039414.11	ENSMUST00000233850.2	2158	10	2030	9097	2030	-9097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGATCTGCCGTCCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	79074463	79069458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79069696_79070361_79070507_79072756_79072885_79074308
ENSMUSG00000039414.11_79069532_79074522_1	chr17	-	651	4	ISM	ENSMUSG00000039414.11	ENSMUST00000233850.2	2158	10	1971	9170	1971	-9170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCACACGGCCATGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	79074522	79069531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79069696_79070361_79070507_79072756_79072885_79074308
ENSMUSG00000039414.11_79069598_79074563_1	chr17	-	626	4	ISM	ENSMUSG00000039414.11	ENSMUST00000233850.2	2158	10	1930	9236	1930	-9236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGCTGATGTTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	79074563	79069597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79069696_79070361_79070507_79072756_79072885_79074308
ENSMUSG00000039414.11_79070405_79075957_1	chr17	-	648	4	ISM	ENSMUSG00000039414.11	ENSMUST00000233850.2	2158	10	536	10043	536	-10043	internal_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGCTCAGGACTATCT	NA	NA	NA	NA	NA	NA	NA	NA	79075957	79070404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79070507_79072756_79072885_79074308_79074564_79075794
ENSMUSG00000039414.11_79070449_79076016_1	chr17	-	663	4	ISM	ENSMUSG00000039414.11	ENSMUST00000233850.2	2158	10	477	10087	477	-10087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTATCCAGCTGCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	79076016	79070448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79070507_79072756_79072885_79074308_79074564_79075794
ENSMUSG00000039414.11_79072794_79081031_1	chr17	-	649	4	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	61722	12467	-4538	-12432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTTATGCACGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	79081031	79072793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79072885_79074308_79074564_79075794_79076033_79080966
ENSMUSG00000039414.11_79074447_79098909_1	chr17	-	650	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	43844	14120	-22416	-14085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGTCCACAGAAGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	79098909	79074446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863
ENSMUSG00000039414.11_79075862_79102613_1	chr17	-	692	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	40140	15535	-26120	-15500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCACTGAAAGACTACGC	NA	NA	NA	NA	NA	NA	NA	NA	79102613	79075861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523
ENSMUSG00000039414.11_79081002_79103286_1	chr17	-	684	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	39467	20675	-26793	-20640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAAGCTGGCCGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	79103286	79081001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250
ENSMUSG00000039414.11_79081126_79103379_1	chr17	-	653	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	39374	20799	-26886	-20764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGGCGTTGTCAGCGACCT	NA	NA	NA	NA	NA	NA	NA	NA	79103379	79081125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250
ENSMUSG00000039414.11_79099003_79103957_1	chr17	-	680	4	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	38796	38676	-27464	-38641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGGCTGCAACTGATC	NA	NA	NA	NA	NA	NA	NA	NA	79103957	79099002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79099046_79102523_79102776_79103250_79103491_79103812
ENSMUSG00000039414.11_79102729_79110845_1	chr17	-	647	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	31908	42402	30829	-42367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGAAAGATGAGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	79110845	79102728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800
ENSMUSG00000039414.11_79103423_79113480_1	chr17	-	678	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	29273	43096	28194	-43061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAGACACGGGGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	79113480	79103422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375
ENSMUSG00000039414.11_79103910_79115844_1	chr17	-	654	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	26909	43583	25830	-43548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCCGGCAACTCGCACA	NA	NA	NA	NA	NA	NA	NA	NA	79115844	79103909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758
ENSMUSG00000039414.11_79109166_79117998_1	chr17	-	649	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	24755	48839	23676	-48804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCCATTACCCAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	79117998	79109165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936
ENSMUSG00000039414.11_79110864_79120577_1	chr17	-	638	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	22176	50537	21097	-50502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCAGTGCCTGGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	79120577	79110863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523
ENSMUSG00000039414.11_79110912_79120662_1	chr17	-	675	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	22091	50585	21012	-50550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTACTCACCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79120662	79110911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523
ENSMUSG00000039414.11_79113428_79121566_1	chr17	-	647	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	21187	53101	20108	-53066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCATTTTACTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	79121566	79113427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500
ENSMUSG00000039414.11_79113475_79121625_1	chr17	-	659	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	21128	53148	20049	-53113	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTTATGTTGGTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	79121625	79113474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500
ENSMUSG00000039414.11_79115891_79123693_1	chr17	-	648	6	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	19060	55564	17981	-55529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTATGGGAGCCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	79123693	79115890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660
ENSMUSG00000039414.11_79118004_79124970_1	chr17	-	658	6	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	17783	57677	16704	-57642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAAGGTGTCCGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	79124970	79118003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901
ENSMUSG00000039414.11_79120648_79126324_1	chr17	-	669	6	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	16429	60321	15350	-60286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTACCTACGGATACCT	NA	NA	NA	NA	NA	NA	NA	NA	79126324	79120647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234
ENSMUSG00000039414.11_79121533_79128156_1	chr17	-	714	6	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	14597	61206	13518	-61171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGACTGATCATAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	79128156	79121532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049
ENSMUSG00000039414.11_79123690_79128909_1	chr17	-	653	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	13844	63363	12765	-63328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGAATGTGCCATGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	79128909	79123689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843
ENSMUSG00000039414.11_79124960_79132002_1	chr17	-	692	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	10751	64633	9672	-64598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGGGATTCATTCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	79132002	79124959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924
ENSMUSG00000039414.11_79125032_79132037_1	chr17	-	655	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	10716	64705	9637	-64670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCCAAGATGTTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	79132037	79125031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924
ENSMUSG00000039414.11_79128089_79133742_1	chr17	-	700	4	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	9011	67762	7932	-67727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTGTCCTTTGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	79133742	79128088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79128301_79128843_79129000_79131924_79132175_79133660
ENSMUSG00000039414.11_79128261_79135421_1	chr17	-	665	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	7332	67934	6253	-67899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCTGCTCGGCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79135421	79128260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360
ENSMUSG00000039414.11_79131925_79137071_1	chr17	-	730	4	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	5682	71598	4603	-71563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGAGACCTGGTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	79137071	79131924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79132175_79133660_79133819_79135360_79135533_79136921
ENSMUSG00000039414.11_79132087_79138074_1	chr17	-	655	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	4679	71760	3600	-71725	internal_fragment	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATCCTCGAGCAACACAA	NA	NA	NA	NA	NA	NA	NA	NA	79138074	79132086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987
ENSMUSG00000039414.11_79133701_79138906_1	chr17	-	653	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	3847	73374	2768	-73339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTCTGTTAATCGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	79138906	79133700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802
ENSMUSG00000039414.11_79133758_79138963_1	chr17	-	653	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	3790	73431	2711	-73396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGCGCGGAGGGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	79138963	79133757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802
ENSMUSG00000039414.11_79135389_79141567_1	chr17	-	658	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	1186	75062	107	-75027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCATTGATGCCGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	79141567	79135388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524
ENSMUSG00000039414.11_79135446_79141622_1	chr17	-	656	5	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	1131	75119	52	-75084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAAATTATGGGGTACG	NA	NA	NA	NA	NA	NA	NA	NA	79141622	79135445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524
ENSMUSG00000039427.15_5051485_5062418_1	chr16	+	1295	12	FSM	ENSMUSG00000039427.15	ENST00000684335.1	1296	12	1	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCGCTCACTCACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	5051484	5062418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5060352_5060468_5061551_5061628_5062304
ENSMUSG00000039427.15_5051502_5059173_1	chr16	+	958	9	ISM	ENSMUSG00000039427.15	ENST00000684190.1	1368	12	18	3245	0	-1294	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGCCACCTCATCAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	5051501	5059173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058322_5058383_5059149
ENSMUSG00000039427.15_5051639_5059221_1	chr16	+	869	9	ISM	ENSMUSG00000039427.15	ENST00000684190.1	1368	12	155	3197	137	-1246	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATGGCTGGAAGCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	5051638	5059221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058322_5058383_5059149
ENSMUSG00000039427.15_5051708_5059253_1	chr16	+	832	9	ISM	ENSMUSG00000039427.15	ENST00000684190.1	1368	12	224	3165	206	-1214	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTAGGTGAGAGGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	5051707	5059253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058322_5058383_5059149
ENSMUSG00000039427.15_5052830_5060467_1	chr16	+	940	9	ISM	ENSMUSG00000039427.15	ENST00000684190.1	1368	12	1346	1951	1328	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTGCAGATACCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	5052829	5060467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058322_5058383_5059149_5059261_5060352
ENSMUSG00000039427.15_5053034_5061627_1	chr16	+	931	9	ISM	ENSMUSG00000039427.15	ENST00000684190.1	1368	12	1550	791	1532	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGGTCTACTCCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	5053033	5061627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058322_5058383_5059149_5059261_5060352_5060468_5061551
ENSMUSG00000039427.15_5054258_5062369_1	chr16	+	825	9	ISM	ENSMUSG00000039427.15	ENST00000684190.1	1368	12	2774	49	-2662	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGGGGCAGCAACGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	5054257	5062369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5062304
ENSMUSG00000039427.15_5056914_5061627_1	chr16	+	636	7	FSM	ENSMUSG00000039427.15	ENST00000450217.3	632	7	-6	2	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGGTCTACTCCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	5056913	5061627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_5057031_5057774_5057892_5058007_5058051_5058322_5058383_5059149_5059261_5060352_5060465_5061551
ENSMUSG00000039427.15_5057808_5060408_1	chr16	+	350	5	ISM	ENSMUSG00000039427.15	ENST00000515248.1	499	6	17	1219	17	-59	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGGTGGTGGACATGTT	NA	NA	NA	NA	NA	NA	NA	NA	5057807	5060408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352
ENSMUSG00000039427.15_5057864_5060462_1	chr16	+	348	5	ISM	ENSMUSG00000039427.15	ENST00000515248.1	499	6	73	1165	73	-5	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGTAGGTGCAGATACC	NA	NA	NA	NA	NA	NA	NA	NA	5057863	5060462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352
ENSMUSG00000039427.15_5059148_5061627_1	chr16	+	304	3	ISM	ENSMUSG00000039427.15	ENST00000684190.1	1368	12	7664	791	803	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGGTCTACTCCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	5059147	5061627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_5059261_5060352_5060468_5061551
ENSMUSG00000039427.15_5060351_5061627_1	chr16	+	190	2	ISM	ENSMUSG00000039427.15	ENST00000533887.1	337	4	2006	0	2006	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGGTCTACTCCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	5060350	5061627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_5060465_5061551
ENSMUSG00000039427.15_5060377_5062650_1	chr16	+	513	3	ISM	ENSMUSG00000039427.15	ENSMUST00000049207.9	1669	12	8875	126	2032	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCGTTCTGGTTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	5060376	5062650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_5060468_5061551_5061628_5062304
ENSMUSG00000039428.12_88789995_88803328_1	chr7	-	1585	6	ISM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	184667	1073	184640	-1073	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGGTGCTGATTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	88803328	88789994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235
ENSMUSG00000039428.12_88790227_88808165_1	chr7	-	1587	8	ISM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	179830	1305	179803	-1305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTCTTTATAGCTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	88808165	88790226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076
ENSMUSG00000039449.15_4610865_4640781_1	chr2	-	460	4	NNC	ENSMUSG00000039449.15	novel	531	5	NA	NA	1249	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGATGTGGTGGGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	4640781	4610864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_4610955_4638243_4638400_4640441_4640514_4640639
ENSMUSG00000039449.15_4610865_4640781_2	chr2	-	460	4	NNC	ENSMUSG00000039449.15	novel	531	5	NA	NA	1249	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGATGTGGTGGGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	4640781	4610864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_4610955_4638244_4638400_4640441_4640514_4640638
ENSMUSG00000039449.15_4610865_4641988_1	chr2	-	483	5	NNC	ENSMUSG00000039449.15	novel	531	5	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2022	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGATGTGGTGGGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	4641988	4610864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_4610955_4638243_4638400_4640447_4640514_4640638_4640780_4641958
ENSMUSG00000039449.15_4610865_4641988_2	chr2	-	489	5	FSM	ENSMUSG00000039449.15	ENST00000601460.5	531	5	42	0	42	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGATGTGGTGGGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	4641988	4610864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_4610955_4638243_4638400_4640441_4640514_4640638_4640780_4641958
ENSMUSG00000039449.15_4627112_4638291_1	chr2	-	2274	2	ISM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	18606	243	3739	-243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCTACATAGAAACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4638291	4627111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_4629338_4638243
ENSMUSG00000039449.15_4627295_4640669_1	chr2	-	2302	4	ISM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	16228	426	1361	-426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTTATTTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	4640669	4627294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638
ENSMUSG00000039449.15_4627559_4643712_1	chr2	-	2270	6	ISM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	13185	690	-1682	-690	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGCTGGAGAAATGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	4643712	4627558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659
ENSMUSG00000039449.15_4627660_4648497_1	chr2	-	2299	7	ISM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	8400	791	-6467	-791	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATCAGAAATGCCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	4648497	4627659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461
ENSMUSG00000039449.15_4627847_4653078_1	chr2	-	2322	9	ISM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	3819	978	3819	-978	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTGCAGGGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	4653078	4627846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051
ENSMUSG00000039449.15_4627975_4656779_1	chr2	-	2298	10	FSM	ENSMUSG00000039449.15	ENSMUST00000152362.7	1579	10	145	-864	118	864	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGAACAGGACCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	4656779	4627974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
ENSMUSG00000039449.15_4628034_4656897_1	chr2	-	2357	10	FSM	ENSMUSG00000039449.15	ENSMUST00000152362.7	1579	10	27	-805	0	805	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTTCTCTACCCCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	4656897	4628033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
ENSMUSG00000039449.15_4628101_4656897_1	chr2	-	2290	10	FSM	ENSMUSG00000039449.15	ENSMUST00000152362.7	1579	10	27	-738	0	738	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTACTCATGTAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	4656897	4628100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
ENSMUSG00000039461.13_108181199_108183006_1	chr9	-	443	3	FSM	ENSMUSG00000039461.13	ENSMUST00000044725.9	1668	3	183	1042	141	-110	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGGAAAGACTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	108183006	108181198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_108181453_108182524_108182628_108182920
ENSMUSG00000039461.13_108181344_108183148_1	chr9	-	440	3	FSM	ENSMUSG00000039461.13	ENSMUST00000044725.9	1668	3	41	1187	-1	-255	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCCAGACCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	108183148	108181343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_108181453_108182524_108182628_108182920
ENSMUSG00000039473.9_4868127_4889958_1	chr16	+	1739	9	ISM	ENSMUSG00000039473.9	ENST00000262376.11	6304	18	197	14193	195	-14191	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTGTTTGCCTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	4868126	4889958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4868605_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917
ENSMUSG00000039473.9_4868190_4890059_1	chr16	+	1777	9	ISM	ENSMUSG00000039473.9	ENST00000262376.11	6304	18	260	14092	258	-14090	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGCCTAAGGATCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	4868189	4890059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4868605_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917
ENSMUSG00000039473.9_4873111_4894820_1	chr16	+	1734	14	ISM	ENSMUSG00000039473.9	ENSMUST00000229126.2	5589	17	4513	9333	4513	-9329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTCTCAGAACATCAGG	NA	NA	NA	NA	NA	NA	NA	NA	4873110	4894820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755
ENSMUSG00000039473.9_4880861_4895169_1	chr16	+	1725	11	ISM	ENSMUSG00000039473.9	ENSMUST00000229126.2	5589	17	12263	8984	12263	-8980	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGAGCAGGCTCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	4880860	4895169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755
ENSMUSG00000039473.9_4881570_4895284_1	chr16	+	1729	10	ISM	ENSMUSG00000039473.9	ENSMUST00000229126.2	5589	17	12972	8869	12972	-8865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCGTCCAAAGCAAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	4881569	4895284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755
ENSMUSG00000039473.9_4882270_4895403_1	chr16	+	1719	9	ISM	ENSMUSG00000039473.9	ENSMUST00000229126.2	5589	17	13672	8750	13672	-8746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACACCCCCATCCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	4882269	4895403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755
ENSMUSG00000039473.9_4882393_4895541_1	chr16	+	1734	9	ISM	ENSMUSG00000039473.9	ENSMUST00000229126.2	5589	17	13795	8612	13795	-8608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTCACCAGCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	4882392	4895541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755
ENSMUSG00000039473.9_4888552_4895836_1	chr16	+	1732	8	ISM	ENSMUSG00000039473.9	ENSMUST00000229126.2	5589	17	19954	8317	19954	-8313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCAGAAGCTGACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	4888551	4895836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755
ENSMUSG00000039473.9_4890898_4899453_1	chr16	+	1741	6	ISM	ENSMUSG00000039473.9	ENSMUST00000229126.2	5589	17	22300	4700	22300	-4696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGGAGTCTCTAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	4890897	4899453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281
ENSMUSG00000039473.9_4891294_4899810_1	chr16	+	1654	6	ISM	ENSMUSG00000039473.9	ENSMUST00000052449.6	6455	19	23362	4339	22696	-4339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGTCTACCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	4891293	4899810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757
ENSMUSG00000039473.9_4895209_4902553_1	chr16	+	1739	4	ISM	ENSMUSG00000039473.9	ENSMUST00000052449.6	6455	19	27277	1596	26611	-1596	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATCTTTATAGATTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	4895208	4902553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4895980_4899281_4899526_4899757_4899848_4901919
ENSMUSG00000039473.9_4895320_4902671_1	chr16	+	1746	4	ISM	ENSMUSG00000039473.9	ENSMUST00000052449.6	6455	19	27388	1478	26722	-1478	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGGAAGACTTAATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	4895319	4902671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4895980_4899281_4899526_4899757_4899848_4901919
ENSMUSG00000039473.9_4895351_4902750_1	chr16	+	1794	4	ISM	ENSMUSG00000039473.9	ENSMUST00000052449.6	6455	19	27419	1399	26753	-1399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTGAGATGAAGATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	4895350	4902750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4895980_4899281_4899526_4899757_4899848_4901919
ENSMUSG00000039473.9_4899388_4903428_1	chr16	+	1737	3	ISM	ENSMUSG00000039473.9	ENSMUST00000052449.6	6455	19	31456	721	30790	-721	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCTTACTGGGAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	4899387	4903428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4899526_4899757_4899848_4901919
ENSMUSG00000039473.9_4899455_4903485_1	chr16	+	1727	3	ISM	ENSMUSG00000039473.9	ENSMUST00000052449.6	6455	19	31523	664	30857	-664	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTTGTATGGAAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	4899454	4903485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_4899526_4899757_4899848_4901919
ENSMUSG00000039476.14_30735263_30770992_1	chr2	+	978	4	FSM	ENSMUSG00000039476.14	ENSMUST00000041659.7	1441	4	192	271	192	-242	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGTAGCCTTGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	30735262	30770992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_30735694_30768421_30768604_30769503_30769683_30770806
ENSMUSG00000039476.14_30735456_30771132_1	chr2	+	925	4	FSM	ENSMUSG00000039476.14	ENSMUST00000041659.7	1441	4	385	131	385	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGGCCTAAGGCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	30735455	30771132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_30735694_30768421_30768604_30769503_30769683_30770806
ENSMUSG00000039477.17_142741063_142759721_1	chr5	-	2674	8	ISM	ENSMUSG00000039477.17	ENST00000502875.1	3610	13	13380	6	13380	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGCAAGCGAGCGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	142759721	142741062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373
ENSMUSG00000039477.17_142741198_142761041_1	chr5	-	2696	9	ISM	ENSMUSG00000039477.17	ENSMUST00000151477.8	6487	16	42376	654	12060	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGAGGCTGAGGCCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	142761041	142741197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759801_142760963
ENSMUSG00000039477.17_142741253_142761110_1	chr5	-	2710	9	ISM	ENSMUSG00000039477.17	ENSMUST00000151477.8	6487	16	42307	709	11991	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTTTGAAACCCAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	142761110	142741252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759801_142760963
ENSMUSG00000039477.17_142745477_142761687_1	chr5	-	2685	9	ISM	ENSMUSG00000039477.17	ENSMUST00000151477.8	6487	16	41730	4933	11414	-4420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTTACAGTAAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	142761687	142745476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759801_142760963_142761155_142761583
ENSMUSG00000039477.17_142745582_142761999_1	chr5	-	2692	10	ISM	ENSMUSG00000039477.17	ENSMUST00000151477.8	6487	16	41418	5038	11102	-4525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTAAACACAAAAGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	142761999	142745581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759801_142760963_142761155_142761583_142761731_142761930
ENSMUSG00000039477.17_142745661_142762072_1	chr5	-	2686	10	ISM	ENSMUSG00000039477.17	ENSMUST00000151477.8	6487	16	41345	5117	11029	-4604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTATGACAGCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	142762072	142745660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759801_142760963_142761155_142761583_142761731_142761930
ENSMUSG00000039477.17_142745721_142762136_1	chr5	-	2690	10	ISM	ENSMUSG00000039477.17	ENSMUST00000151477.8	6487	16	41281	5177	10965	-4664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTCCGACGGCCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	142762136	142745720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759801_142760963_142761155_142761583_142761731_142761930
ENSMUSG00000039477.17_142748808_142772971_1	chr5	-	2701	11	ISM	ENSMUSG00000039477.17	ENSMUST00000151477.8	6487	16	30446	8264	130	-7751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCCGCAGCAGGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	142772971	142748807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759801_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888
ENSMUSG00000039477.17_142775803_142804973_2	chr5	-	404	3	FSM	ENSMUSG00000039477.17	ENST00000399434.2	412	3	12	-4	12	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGGACTGTTGTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	142804973	142775802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_142775945_142778759_142778916_142804867
ENSMUSG00000039480.15_34179605_34287455_1	chr10	-	2548	11	ISM	ENSMUSG00000039480.15	ENSMUST00000105512.8	2727	12	7080	0	6997	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGTATTATTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	34287455	34179604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274192_34275733_34275814_34279646_34279784_34283530_34283603_34287363
ENSMUSG00000039480.15_34180909_34200458_1	chr10	-	781	6	ISM	ENSMUSG00000039480.15	ENST00000319550.9	1298	12	93994	0	93994	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTCCATCATACCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	34200458	34180908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283
ENSMUSG00000039480.15_34186297_34274194_1	chr10	-	799	6	ISM	ENSMUSG00000039480.15	ENST00000319550.9	1298	12	20258	5388	20258	-5388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGGGAAATAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	34274194	34186296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109
ENSMUSG00000039480.15_34189584_34279786_1	chr10	-	803	7	NIC	ENSMUSG00000039480.15	novel	2727	12	NA	NA	14666	-8675	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATCCTGTCTACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	34279786	34189583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_-_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274192_34275733_34275814_34279691
ENSMUSG00000039480.15_34189686_34283603_1	chr10	-	771	8	NIC	ENSMUSG00000039480.15	novel	2727	12	NA	NA	10849	-8777	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTAACTGGGAGACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	34283603	34189685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_-_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274192_34275733_34275814_34279691_34279784_34283530
ENSMUSG00000039480.15_34190744_34287456_1	chr10	-	813	8	NIC	ENSMUSG00000039480.15	novel	2727	12	NA	NA	6996	-9835	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTGATCTCAATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	34287456	34190743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_-_34190865_34198604_34198703_34200283_34200459_34274109_34274192_34275733_34275814_34279691_34279784_34283530_34283603_34287363
ENSMUSG00000039480.15_34198605_34294464_1	chr10	-	799	8	NIC	ENSMUSG00000039480.15	novel	2727	12	NA	NA	0	-17696	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTGTGTTTAGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	34294464	34198604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_-_34198703_34200283_34200459_34274109_34274192_34275733_34275814_34279691_34279784_34283530_34283603_34287363_34287456_34294356
ENSMUSG00000039483.11_30713246_30718561_1	chr2	-	2226	6	FSM	ENSMUSG00000039483.11	ENSMUST00000041726.4	4147	6	1784	137	-1459	-137	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATGAGGGGCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	30718561	30713245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_30714517_30714652_30714740_30715463_30715573_30715666_30715774_30716934_30717111_30718085
ENSMUSG00000039483.11_30713735_30719048_1	chr2	-	2224	6	FSM	ENSMUSG00000039483.11	ENSMUST00000041726.4	4147	6	1297	626	1297	137	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGAAACCACTAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	30719048	30713734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_30714517_30714652_30714740_30715463_30715573_30715666_30715774_30716934_30717111_30718085
ENSMUSG00000039483.11_30713871_30717102_1	chr2	-	1002	4	NNC	ENSMUSG00000039483.11	novel	1007	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAAGACACTTGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	30717102	30713870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_30714511_30714652_30714740_30715666_30715774_30716934
ENSMUSG00000039483.11_30713871_30717102_2	chr2	-	1008	4	FSM	ENSMUSG00000039483.11	ENST00000277459.8	1007	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAAGACACTTGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	30717102	30713870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_30714517_30714652_30714740_30715666_30715774_30716934
ENSMUSG00000039483.11_30714179_30719496_1	chr2	-	2228	6	FSM	ENSMUSG00000039483.11	ENSMUST00000041726.4	4147	6	849	1070	849	-307	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCCGAGGACGACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	30719496	30714178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_30714517_30714652_30714740_30715463_30715573_30715666_30715774_30716934_30717111_30718085
ENSMUSG00000039483.11_30714684_30719861_1	chr2	-	2224	5	ISM	ENSMUSG00000039483.11	ENSMUST00000041726.4	4147	6	484	1575	484	-812	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAAACATCCGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	30719861	30714683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30714740_30715463_30715573_30715666_30715774_30716934_30717111_30718085
ENSMUSG00000039483.11_30717035_30720345_1	chr2	-	2336	2	ISM	ENSMUSG00000039483.11	ENSMUST00000041726.4	4147	6	0	3926	0	-3163	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAGGCGTGAGCAATGC	NA	NA	NA	NA	NA	NA	NA	NA	30720345	30717034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30717111_30718085
ENSMUSG00000039497.9_34027389_34028284_1	chr10	-	384	2	ISM	ENSMUSG00000039497.9	ENST00000331677.7	4708	6	31873	1466	31873	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTCTCCTGCTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	34028284	34027388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_34027707_34028218
ENSMUSG00000039497.9_34027552_34028430_1	chr10	-	367	2	ISM	ENSMUSG00000039497.9	ENST00000331677.7	4708	6	31727	1629	31727	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTTTATAGACCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	34028430	34027551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_34027707_34028218
ENSMUSG00000039497.9_34027599_34028502_1	chr10	-	392	2	ISM	ENSMUSG00000039497.9	ENST00000331677.7	4708	6	31655	1676	31655	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATACAATAACAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	34028502	34027598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_34027707_34028218
ENSMUSG00000039497.9_34029620_34059750_1	chr10	-	1116	5	ISM	ENSMUSG00000039497.9	ENST00000331677.7	4708	6	407	3697	407	177	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAAGAGTTGCTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	34059750	34029619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687
ENSMUSG00000039497.9_34029838_34036021_1	chr10	-	398	3	ISM	ENSMUSG00000039497.9	ENST00000331677.7	4708	6	24136	3915	24136	-41	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAGGAAAACTTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	34036021	34029837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_34029971_34031904_34032113_34035964
ENSMUSG00000039497.9_34032019_34083133_1	chr10	-	1115	5	ISM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	578	4630	578	-2222	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGGGAGTGGAAACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	34083133	34032018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
ENSMUSG00000039497.9_34036146_34083403_1	chr10	-	1110	4	ISM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	308	8757	308	-6349	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTGCTGCGAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	34083403	34036145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_34036205_34038731_34038986_34059687_34060157_34083075
ENSMUSG00000039497.9_34038730_34059750_1	chr10	-	319	2	ISM	ENSMUSG00000039497.9	ENST00000647244.1	899	3	408	8933	407	-8933	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATGTTATCCTAACACA	NA	NA	NA	NA	NA	NA	NA	NA	34059750	34038729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_34038986_34059687
ENSMUSG00000039515.12_30306051_30327683_1	chr2	+	832	6	ISM	ENSMUSG00000039515.12	ENST00000348141.9	1332	10	-27	8900	0	-8900	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCACCGTGGAGTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	30306050	30327683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30306345_30316410_30316516_30318327_30318415_30321972_30322099_30325575_30325694_30327581
ENSMUSG00000039515.12_30306051_30337817_1	chr2	+	2580	10	NNC	ENSMUSG00000039515.12	novel	2586	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	30306050	30337817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333307_30333410_30336388
ENSMUSG00000039515.12_30306154_30328365_1	chr2	+	852	7	ISM	ENSMUSG00000039515.12	ENST00000348141.9	1332	10	76	8218	0	-8218	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTAGTGAGTGGTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	30306153	30328365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30306345_30316410_30316516_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240
ENSMUSG00000039515.12_30306154_30337817_1	chr2	+	2483	10	FSM	ENSMUSG00000039515.12	ENSMUST00000042055.10	2586	10	103	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	30306153	30337817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
ENSMUSG00000039515.12_30306314_30329780_1	chr2	+	797	8	ISM	ENSMUSG00000039515.12	ENST00000348141.9	1332	10	236	6803	160	-6803	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCATGCCAGCCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	30306313	30329780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30306345_30316410_30316516_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675
ENSMUSG00000039515.12_30316409_30333409_1	chr2	+	872	8	ISM	ENSMUSG00000039515.12	ENST00000348141.9	1332	10	10331	3174	10255	-3174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGGGGCTGGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	30316408	30333409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30316516_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301
ENSMUSG00000039515.12_30316463_30336440_1	chr2	+	870	9	ISM	ENSMUSG00000039515.12	ENST00000348141.9	1332	10	10385	143	10309	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCATCCCGTCACATCA	NA	NA	NA	NA	NA	NA	NA	NA	30316462	30336440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30316516_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
ENSMUSG00000039518.8_35865705_35866289_1	chr17	+	443	2	FSM	ENSMUSG00000039518.8	ENST00000376288.3	1409	2	163	803	163	-803	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCCGGTGGCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	35865704	35866289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35865972_35866113
ENSMUSG00000039518.8_35865793_35866344_1	chr17	+	410	2	FSM	ENSMUSG00000039518.8	ENST00000376288.3	1409	2	251	748	251	-748	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCTGGGTTTCAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	35865792	35866344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35865972_35866113
ENSMUSG00000039518.8_35865970_35866490_1	chr17	+	421	2	NNC	ENSMUSG00000039518.8	novel	1409	2	NA	NA	428	-602	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGGGGGTAAAATCTAC	NA	NA	NA	NA	NA	NA	NA	NA	35865969	35866490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35866014_35866113
ENSMUSG00000039531.9_33806173_33825073_1	chr10	-	550	4	FSM	ENSMUSG00000039531.9	ENST00000368573.5	959	4	409	0	409	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGTGACTGCTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	33825073	33806172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_33806341_33816153_33816276_33819645_33819757_33824924
ENSMUSG00000039531.9_33806285_33825169_1	chr10	-	534	4	FSM	ENSMUSG00000039531.9	ENST00000368573.5	959	4	313	112	313	-112	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTTCTACAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	33825169	33806284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_33806341_33816153_33816276_33819645_33819757_33824924
ENSMUSG00000039531.9_33816153_33825253_1	chr10	-	563	3	ISM	ENSMUSG00000039531.9	ENST00000368573.5	959	4	229	9980	229	-9980	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGGATTAGTTTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	33825253	33816152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_33816276_33819645_33819757_33824924
ENSMUSG00000039531.9_33819690_33825402_1	chr10	-	545	2	ISM	ENSMUSG00000039531.9	ENST00000368573.5	959	4	80	13517	80	-13517	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACATGTGGACTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	33825402	33819689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_33819757_33824924
ENSMUSG00000039536.17_166790067_166795271_1	chr2	-	2109	7	ISM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	42914	0	42752	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGTCTTTTTCCAATT	NA	NA	NA	NA	NA	NA	NA	NA	166795271	166790066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127
ENSMUSG00000039536.17_166790193_166796883_1	chr2	-	2047	8	ISM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	41302	126	41140	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTGTTAATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	166796883	166790192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819
ENSMUSG00000039536.17_166790193_166796924_1	chr2	-	2088	8	ISM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	41261	126	41099	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTGTTAATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	166796924	166790192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819
ENSMUSG00000039536.17_166790321_166797006_1	chr2	-	2042	8	ISM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	41179	254	41017	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTGGGGAAGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	166797006	166790320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819
ENSMUSG00000039536.17_166790509_166805396_1	chr2	-	2045	10	ISM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	32789	442	32627	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGTCAAAAGGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	166805396	166790508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348
ENSMUSG00000039536.17_166790558_166805451_1	chr2	-	2051	10	ISM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	32734	491	32572	-365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGGAGCAGACTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	166805451	166790557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348
ENSMUSG00000039536.17_166790672_166806636_1	chr2	-	2138	11	ISM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	31549	605	31387	-479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGTTCTGGAATTACC	NA	NA	NA	NA	NA	NA	NA	NA	166806636	166790671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498
ENSMUSG00000039536.17_166790800_166838023_1	chr2	-	2081	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	162	733	0	-607	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAACACTATAATTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	166838023	166790799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ENSMUSG00000039536.17_166790868_166838049_1	chr2	-	2039	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	136	801	-26	-675	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCGCCACACGTAGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	166838049	166790867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ENSMUSG00000039536.17_166790947_166838185_1	chr2	-	2096	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	0	880	0	-754	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGAGGCCTTATAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	166838185	166790946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ENSMUSG00000039542.17_49415996_49421068_1	chr9	-	1049	3	ISM	ENSMUSG00000039542.17	ENST00000531044.5	2564	17	60135	-685	60135	352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTTTTTCCTCTACTC	NA	NA	NA	NA	NA	NA	NA	NA	49421068	49415995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49416864_49419888_49420006_49421004
ENSMUSG00000039542.17_49416116_49421180_1	chr9	-	1041	3	ISM	ENSMUSG00000039542.17	ENST00000531044.5	2564	17	60023	-565	60023	232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTTTGTTCCATAT	NA	NA	NA	NA	NA	NA	NA	NA	49421180	49416115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49416864_49419888_49420006_49421004
ENSMUSG00000039542.17_49416681_49456121_1	chr9	-	1117	7	ISM	ENSMUSG00000039542.17	ENSMUST00000166811.9	3088	18	254051	333	25082	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAATAATCCCCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	49456121	49416680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431516_49434821_49434947_49454310_49454443_49455950
ENSMUSG00000039542.17_49416791_49454389_1	chr9	-	783	6	ISM	ENSMUSG00000039542.17	ENSMUST00000166811.9	3088	18	255783	443	26814	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCCCAACGATGCCACACA	NA	NA	NA	NA	NA	NA	NA	NA	49454389	49416790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431516_49434821_49434947_49454310
ENSMUSG00000039542.17_49416810_49456506_1	chr9	-	1042	8	ISM	ENSMUSG00000039542.17	ENSMUST00000166811.9	3088	18	253666	462	24697	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAACTGAAGTCAAGACGG	NA	NA	NA	NA	NA	NA	NA	NA	49456506	49416809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431516_49434821_49434947_49454310_49454443_49455950_49456122_49456452
ENSMUSG00000039542.17_49419941_49456953_1	chr9	-	1034	8	ISM	ENSMUSG00000039542.17	ENSMUST00000166811.9	3088	18	253219	3593	24250	-3260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGGGGAAGCACACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	49456953	49419940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49420006_49421004_49421213_49431334_49431516_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898
ENSMUSG00000039542.17_49421004_49457083_1	chr9	-	1100	7	ISM	ENSMUSG00000039542.17	ENSMUST00000166811.9	3088	18	253089	4656	24120	-4323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTAAAAAACCCGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	49457083	49421003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49421213_49431334_49431516_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898
ENSMUSG00000039542.17_49421130_49457521_1	chr9	-	1038	8	ISM	ENSMUSG00000039542.17	ENSMUST00000166811.9	3088	18	252651	4782	23682	-4449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGACATCACCTGCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	49457521	49421129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49421213_49431334_49431516_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457
ENSMUSG00000039542.17_49428578_49478067_1	chr9	-	1871	12	ISM	ENSMUSG00000039542.17	ENSMUST00000114476.8	2567	16	232123	0	3136	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATCATCAGTTGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	49478067	49428577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49428883_49431334_49431513_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974
ENSMUSG00000039542.17_49428742_49478674_1	chr9	-	1790	13	ISM	ENSMUSG00000039542.17	ENSMUST00000114476.8	2567	16	231516	164	2529	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCACACGCACACGCACG	NA	NA	NA	NA	NA	NA	NA	NA	49478674	49428741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49428883_49431334_49431513_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636
ENSMUSG00000039542.17_49428793_49478729_1	chr9	-	1794	13	ISM	ENSMUSG00000039542.17	ENSMUST00000114476.8	2567	16	231461	215	2474	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATGTGTGCGAGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	49478729	49428792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49428883_49431334_49431513_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636
ENSMUSG00000039542.17_49428848_49478780_1	chr9	-	1790	13	ISM	ENSMUSG00000039542.17	ENSMUST00000114476.8	2567	16	231410	270	2423	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCATTGCTTTTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	49478780	49428847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49428883_49431334_49431513_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636
ENSMUSG00000039542.17_49428855_49479651_1	chr9	-	1804	14	ISM	ENSMUSG00000039542.17	ENSMUST00000114476.8	2567	16	230539	277	1552	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGGTCTCATTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	49479651	49428854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49428883_49431334_49431513_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630
ENSMUSG00000039542.17_49431499_49479849_1	chr9	-	1813	13	ISM	ENSMUSG00000039542.17	ENSMUST00000166811.9	3088	18	230323	15151	1354	-2921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCGGAAATCAGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	49479849	49431498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49431516_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630
ENSMUSG00000039542.17_49434822_49481200_1	chr9	-	1871	13	ISM	ENSMUSG00000039542.17	ENSMUST00000114476.8	2567	16	228990	6244	3	-6244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTAGCTTCCATCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	49481200	49434821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125
ENSMUSG00000039542.17_49434926_49481200_1	chr9	-	1767	13	ISM	ENSMUSG00000039542.17	ENSMUST00000114476.8	2567	16	228990	6348	3	-6348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGGGCAGATGGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	49481200	49434925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125
ENSMUSG00000039552.15_33784146_33788972_1	chr10	+	312	3	ISM	ENSMUSG00000039552.15	ENST00000368580.4	723	4	83	1584	83	-1584	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTGGACAACACAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	33784145	33788972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_33784298_33787501_33787647_33788957
ENSMUSG00000039552.15_33784191_33789028_1	chr10	+	323	3	ISM	ENSMUSG00000039552.15	ENST00000368580.4	723	4	128	1528	128	-1528	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGCTCCAATCTTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	33784190	33789028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_33784298_33787501_33787647_33788957
ENSMUSG00000039552.15_33784233_33790368_1	chr10	+	365	4	FSM	ENSMUSG00000039552.15	ENST00000368580.4	723	4	170	188	170	-188	multi-exon	FALSE	canonical	NA	NA	NA	NA	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTGGAGAATTACAC	NA	NA	NA	NA	NA	NA	NA	NA	33784232	33790368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_33784298_33787501_33787647_33788957_33789076_33790331
ENSMUSG00000039552.15_33787501_33790446_1	chr10	+	379	3	ISM	ENSMUSG00000039552.15	ENST00000368580.4	723	4	3438	110	3438	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATGATCCCAGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	33787500	33790446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_33787647_33788957_33789076_33790331
ENSMUSG00000039552.15_33789016_33790556_1	chr10	+	285	2	ISM	ENSMUSG00000039552.15	ENST00000368580.4	723	4	4953	0	4953	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACTAATACAAAACTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	33789015	33790556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_33789076_33790331
ENSMUSG00000039568.7_4692652_4697669_1	chr16	-	1400	3	FSM	ENSMUSG00000039568.7	ENST00000590965.1	1403	3	-1	4	-1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCACCAGGCTCTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	4697669	4692651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_4693734_4694225_4694321_4697446
ENSMUSG00000039568.7_4692652_4697995_1	chr16	-	1657	3	FSM	ENSMUSG00000039568.7	ENSMUST00000037843.7	1851	3	184	10	184	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCACCAGGCTCTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	4697995	4692651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_4693734_4694225_4694286_4697480
ENSMUSG00000039568.7_4693471_4697669_1	chr16	-	437	3	FSM	ENSMUSG00000039568.7	ENST00000587615.1	697	3	-3	263	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCGACTTCAGACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	4697669	4693470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_4693659_4694225_4694286_4697480
ENSMUSG00000039577.18_152568827_152623344_1	chr4	+	2033	15	ISM	ENSMUSG00000039577.18	ENST00000622020.4	2472	17	-28	8241	0	-8241	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCCACCCGAGACCACG	NA	NA	NA	NA	NA	NA	NA	NA	152568826	152623344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622251_152622381_152622476_152622669_152623279
ENSMUSG00000039577.18_152568827_152623394_1	chr4	+	2083	15	ISM	ENSMUSG00000039577.18	ENST00000622020.4	2472	17	-28	8191	0	-8191	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGCAAGAGCGGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	152568826	152623394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622251_152622381_152622476_152622669_152623279
ENSMUSG00000039577.18_152568965_152623440_1	chr4	+	1991	15	ISM	ENSMUSG00000039577.18	ENST00000622020.4	2472	17	110	8145	110	-8145	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAAAGATGGCTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	152568964	152623440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622251_152622381_152622476_152622669_152623279
ENSMUSG00000039577.18_152573254_152628825_1	chr4	+	2000	15	ISM	ENSMUSG00000039577.18	ENST00000622020.4	2472	17	4399	2760	4399	-2760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCACTACCTGGCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	152573253	152628825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622251_152622381_152622476_152622669_152623279_152623468_152628755
ENSMUSG00000039577.18_152573286_152628857_1	chr4	+	1998	15	NNC	ENSMUSG00000039577.18	novel	2472	17	NA	NA	4431	-2728	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACGTCTGGGATGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	152573285	152628857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622251_152622381_152622476_152622669_152623281_152623468_152628755
ENSMUSG00000039577.18_152581104_152631481_1	chr4	+	2074	15	ISM	ENSMUSG00000039577.18	ENST00000622020.4	2472	17	12249	104	12249	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCCGTGAGCGGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	152581103	152631481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622251_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402
ENSMUSG00000039577.18_152582633_152631587_1	chr4	+	2006	14	ISM	ENSMUSG00000039577.18	ENST00000622020.4	2472	17	13778	-2	13778	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGGCAGCTTCACATG	NA	NA	NA	NA	NA	NA	NA	NA	152582632	152631587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622251_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402
ENSMUSG00000039615.10_26049479_26050605_1	chr17	-	768	4	ISM	ENSMUSG00000039615.10	ENSMUST00000236515.2	1701	6	1310	-129	323	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAGAAAAAAAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	26050605	26049478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517
ENSMUSG00000039615.10_26049608_26050817_1	chr17	-	687	5	ISM	ENSMUSG00000039615.10	ENSMUST00000236515.2	1701	6	1098	0	111	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGCTGGTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	26050817	26049607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769
ENSMUSG00000039615.10_26049608_26050935_1	chr17	-	805	5	ISM	ENSMUSG00000039615.10	ENSMUST00000236515.2	1701	6	980	0	-7	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGCTGGTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	26050935	26049607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769
ENSMUSG00000039615.10_26049857_26051682_1	chr17	-	772	7	FSM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	653	378	233	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATGTCCTGCCTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	26051682	26049856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26051665
ENSMUSG00000039615.10_26049912_26050554_1	chr17	-	307	4	ISM	ENSMUSG00000039615.10	ENST00000416154.2	564	5	374	47	374	-47	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGTCATTGACGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	26050554	26049911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050494
ENSMUSG00000039615.10_26049919_26051735_1	chr17	-	763	7	FSM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	600	440	180	-54	multi-exon	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATGAAGGAAGTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	26051735	26049918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26051665
ENSMUSG00000039615.10_26049974_26051783_1	chr17	-	756	7	FSM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	552	495	132	-109	multi-exon	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGACCCTGTGACCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	26051783	26049973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26051665
ENSMUSG00000039615.10_26050126_26051893_1	chr17	-	805	6	ISM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	442	647	22	-261	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAGTGGTATCACCTAT	NA	NA	NA	NA	NA	NA	NA	NA	26051893	26050125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26051665
ENSMUSG00000039615.10_26050339_26050937_1	chr17	-	280	3	ISM	ENSMUSG00000039615.10	ENST00000416154.2	564	5	-9	474	-9	-474	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATACATGGCAGATATG	NA	NA	NA	NA	NA	NA	NA	NA	26050937	26050338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26050340_26050494_26050606_26050769
ENSMUSG00000039615.10_26050769_26052031_1	chr17	-	732	3	ISM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	304	1290	-110	-904	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCCTCCCCCAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	26052031	26050768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26050936_26051019_26051219_26051665
ENSMUSG00000039615.10_26050816_26052085_1	chr17	-	739	3	ISM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	250	1337	-164	-951	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCATTCATATCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	26052085	26050815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26050936_26051019_26051219_26051665
ENSMUSG00000039615.10_26050866_26052139_1	chr17	-	743	3	ISM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	196	1387	196	-1001	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGCGCTGGAACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	26052139	26050865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26050936_26051019_26051219_26051665
ENSMUSG00000039615.10_26051062_26052335_1	chr17	-	827	2	ISM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	0	1583	0	-1197	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGAGAGTTATGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	26052335	26051061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26051219_26051665
ENSMUSG00000039630.11_178155473_178157785_1	chr1	-	1628	3	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	7577	3565	7577	-3565	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACTTAACTAGCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	178157785	178155472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_178156973_178157432_178157505_178157729
ENSMUSG00000039630.11_178155530_178157885_1	chr1	-	1671	3	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	7477	3622	7477	-3622	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTTTAGAAGCCATCAT	NA	NA	NA	NA	NA	NA	NA	NA	178157885	178155529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_178156973_178157432_178157505_178157729
ENSMUSG00000039630.11_178155725_178158277_1	chr1	-	1623	4	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	7085	3817	7085	-3817	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATACTGATGATTGATT	NA	NA	NA	NA	NA	NA	NA	NA	178158277	178155724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156
ENSMUSG00000039630.11_178155903_178158700_1	chr1	-	1622	5	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	6662	3995	6662	-3995	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGACGTTTGTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	178158700	178155902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657
ENSMUSG00000039630.11_178156066_178158952_1	chr1	-	1624	6	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	6410	4158	6410	-4158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTAGTGTGCTTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	178158952	178156065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913
ENSMUSG00000039630.11_178156295_178159684_1	chr1	-	1632	8	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	5678	4387	5678	-4387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTAGAAGGGCTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	178159684	178156294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657
ENSMUSG00000039630.11_178156360_178159739_1	chr1	-	1622	8	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	5623	4452	5623	-4452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATGGAATTGGCATAAT	NA	NA	NA	NA	NA	NA	NA	NA	178159739	178156359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657
ENSMUSG00000039630.11_178156786_178161504_1	chr1	-	1644	11	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	3858	4878	3858	-4878	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGATTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	178161504	178156785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451
ENSMUSG00000039630.11_178156941_178163492_1	chr1	-	1622	12	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	1870	5033	1870	-5033	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCACCAAGGATATTATT	NA	NA	NA	NA	NA	NA	NA	NA	178163492	178156940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446
ENSMUSG00000039630.11_178157850_178164605_1	chr1	-	1626	12	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	757	5942	757	-5942	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTGGTGGAATTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	178164605	178157849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ENSMUSG00000039630.11_178158315_178164839_1	chr1	-	1640	11	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	523	6407	523	-6407	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAAGCAAAAAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	178164839	178158314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ENSMUSG00000039630.11_178158946_178165130_1	chr1	-	1633	9	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	232	7038	232	-7038	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGTAAGAAGCGAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	178165130	178158945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ENSMUSG00000039630.11_178159018_178165293_1	chr1	-	1724	9	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	69	7110	69	-7110	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATACTGGAAAACTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	178165293	178159017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ENSMUSG00000039634.13_49521487_49530249_1	chr4	+	1427	3	FSM	ENSMUSG00000039634.13	ENSMUST00000107696.2	2965	3	270	1268	270	-1268	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATCTTGTACAGCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	49521486	49530249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_49521596_49522397_49522483_49529016
ENSMUSG00000039637.16_4445516_4450128_1	chr16	-	1002	10	ISM	ENSMUSG00000039637.16	ENST00000574025.5	2448	24	44767	43	44767	-43	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCACAGGACTCCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	4450128	4445515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082
ENSMUSG00000039637.16_4446102_4450331_1	chr16	-	999	10	ISM	ENSMUSG00000039637.16	ENST00000574025.5	2448	24	44564	629	44564	-629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTTCAGCACAATACTT	NA	NA	NA	NA	NA	NA	NA	NA	4450331	4446101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276
ENSMUSG00000039637.16_4446616_4451194_1	chr16	-	1015	10	ISM	ENSMUSG00000039637.16	ENST00000574025.5	2448	24	43701	1143	43701	-1143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCCAAAGCCTGGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	4451194	4446615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118
ENSMUSG00000039637.16_4450110_4472932_1	chr16	-	1012	10	ISM	ENSMUSG00000039637.16	ENST00000574025.5	2448	24	21963	4637	21963	-4637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCACACCTGAGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	4472932	4450109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873
ENSMUSG00000039637.16_4450323_4473485_1	chr16	-	1004	10	ISM	ENSMUSG00000039637.16	ENST00000574025.5	2448	24	21410	4850	21410	-4850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATCTGGTCTGGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	4473485	4450322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411
ENSMUSG00000039637.16_4451188_4486667_1	chr16	-	996	11	ISM	ENSMUSG00000039637.16	ENST00000574025.5	2448	24	8228	5715	8228	-5715	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCGCTAACCGGCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	4486667	4451187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607
ENSMUSG00000039637.16_4451578_4494881_1	chr16	-	1063	12	ISM	ENSMUSG00000039637.16	ENST00000574025.5	2448	24	14	6105	14	-6105	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTGCTCACAGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	4494881	4451577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4493626_4493702_4494799
ENSMUSG00000039640.8_120376118_120379439_1	chr11	+	659	4	ISM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	679	452	679	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCACAAGAGATTGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	120376117	120379439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120376256_120376481_120376569_120378922_120379061_120379143
ENSMUSG00000039640.8_120378917_120379583_1	chr11	+	584	2	ISM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	3478	308	3478	-308	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCCTGAACCTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	120378916	120379583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120379061_120379143
ENSMUSG00000039640.8_120378960_120379644_1	chr11	+	602	2	ISM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	3521	247	3521	-247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTATCCTTGATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	120378959	120379644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120379061_120379143
ENSMUSG00000039640.8_120379004_120379701_1	chr11	+	615	2	ISM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	3565	190	3565	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGTTGTGTCTTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	120379003	120379701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_120379061_120379143
ENSMUSG00000039646.6_4457853_4467209_1	chr16	+	1324	2	FSM	ENSMUSG00000039646.6	ENSMUST00000038770.4	2829	2	48	1457	48	-1457	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACTACCCAGGCCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	4457852	4467209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_4458013_4466045
ENSMUSG00000039648.15_30075678_30077771_1	chr2	-	714	7	ISM	ENSMUSG00000039648.15	ENSMUST00000113659.8	1367	11	6353	398	6353	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAGAAAGCTGGGGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	30077771	30075677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700
ENSMUSG00000039648.15_30076203_30078151_1	chr2	-	772	7	ISM	ENSMUSG00000039648.15	ENSMUST00000113659.8	1367	11	5973	923	5973	-525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTGGGCTCCTGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	30078151	30076202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064
ENSMUSG00000039648.15_30076657_30082084_1	chr2	-	803	7	ISM	ENSMUSG00000039648.15	ENST00000436267.7	1586	12	6084	979	2040	-979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAGGGCAAGAAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	30082084	30076656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936
ENSMUSG00000039648.15_30076843_30084124_1	chr2	-	773	7	ISM	ENSMUSG00000039648.15	ENST00000436267.7	1586	12	4044	1165	0	-1165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGCCCACGTAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	30084124	30076842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065
ENSMUSG00000039648.15_30077775_30088030_1	chr2	-	731	6	ISM	ENSMUSG00000039648.15	ENST00000436267.7	1586	12	138	2097	138	-2097	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACTGGCCAGCAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	30088030	30077774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084295_30087968
ENSMUSG00000039656.18_34251026_34257238_1	chr17	+	2254	10	FSM	ENSMUSG00000039656.18	ENSMUST00000044858.16	2627	10	240	133	-144	-129	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGTGGGGACATTGATG	NA	NA	NA	NA	NA	NA	NA	NA	34251025	34257238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
ENSMUSG00000039662.17_152381761_152391397_1	chr4	+	4661	5	FSM	ENSMUSG00000039662.17	ENSMUST00000048892.14	4919	5	77	181	77	-181	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTCACTGTCCTGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	152381760	152391397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_152382026_152383141_152383231_152384127_152384298_152384993_152385212_152387478
ENSMUSG00000039662.17_152383139_152391578_1	chr4	+	4580	4	ISM	ENSMUSG00000039662.17	ENSMUST00000048892.14	4919	5	1455	0	1455	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTCCTGTATCAG	NA	NA	NA	NA	NA	NA	NA	NA	152383138	152391578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152383231_152384127_152384298_152384993_152385212_152387478
ENSMUSG00000039671.19_165629095_165654644_1	chr2	-	1445	8	ISM	ENSMUSG00000039671.19	ENST00000617418.4	3283	20	63053	11	45449	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCAGAAGTGTAAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	165654644	165629094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165647106_165647298_165649594_165649850_165654268
ENSMUSG00000039671.19_165633825_165654780_1	chr2	-	1508	7	ISM	ENSMUSG00000039671.19	ENST00000617418.4	3283	20	62917	4741	45313	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTCGCCCCCTGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	165654780	165633824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165647106_165647298_165649594_165649850_165654268
ENSMUSG00000039671.19_165633844_165654346_1	chr2	-	1136	8	ISM	ENSMUSG00000039671.19	ENSMUST00000109266.11	5072	22	45747	7772	45747	-19	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCCAATCAAAGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	165654346	165633843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165654268
ENSMUSG00000039671.19_165634802_165657343_1	chr2	-	1468	7	ISM	ENSMUSG00000039671.19	ENST00000617418.4	3283	20	60354	5718	42750	-977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCACCTTCAGAACCGGC	NA	NA	NA	NA	NA	NA	NA	NA	165657343	165634801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165634888_165636314_165636555_165638002_165638082_165647106_165647298_165649594_165649850_165654268_165654779_165657236
ENSMUSG00000039671.19_165636440_165670152_1	chr2	-	1475	8	ISM	ENSMUSG00000039671.19	ENST00000617418.4	3283	20	47545	7356	29941	-2615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGTGGTGTGCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	165670152	165636439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165636555_165638002_165638082_165647106_165647298_165649594_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127
ENSMUSG00000039671.19_165636493_165670203_1	chr2	-	1473	8	ISM	ENSMUSG00000039671.19	ENST00000617418.4	3283	20	47494	7409	29890	-2668	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAAAAGCAACTGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	165670203	165636492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165636555_165638002_165638082_165647106_165647298_165649594_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127
ENSMUSG00000039671.19_165636528_165670276_1	chr2	-	1511	8	ISM	ENSMUSG00000039671.19	ENST00000617418.4	3283	20	47421	7444	29817	-2703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGAACAGGAGCGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	165670276	165636527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165636555_165638002_165638082_165647106_165647298_165649594_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127
ENSMUSG00000039671.19_165638047_165670396_1	chr2	-	1560	7	ISM	ENSMUSG00000039671.19	ENST00000617418.4	3283	20	47301	8963	29697	-4222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTGCACCAGCAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	165670396	165638046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165638082_165647106_165647298_165649594_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127
ENSMUSG00000039671.19_165647176_165670400_1	chr2	-	1460	6	ISM	ENSMUSG00000039671.19	ENSMUST00000109266.11	5072	22	29693	21104	29693	-13351	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCGACCTTCCCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	165670400	165647175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165647298_165649594_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127
ENSMUSG00000039671.19_165647228_165670452_1	chr2	-	1460	6	ISM	ENSMUSG00000039671.19	ENSMUST00000109266.11	5072	22	29641	21156	29641	-13403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCCTGGTCAGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	165670452	165647227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165647298_165649594_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127
ENSMUSG00000039671.19_165649804_165676848_1	chr2	-	1494	7	NNC	ENSMUSG00000039671.19	novel	3283	20	NA	NA	23245	-15979	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAGAGACACCGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	165676848	165649803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165675227_165675345_165676809
ENSMUSG00000039671.19_165654269_165679256_1	chr2	-	1543	7	NNC	ENSMUSG00000039671.19	novel	3283	20	NA	NA	20837	14833	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTCACACAGAAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	165679256	165654268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165675227_165675345_165676809_165676888_165679200
ENSMUSG00000039671.19_165654405_165680794_1	chr2	-	1470	8	NNC	ENSMUSG00000039671.19	novel	3283	20	NA	NA	19299	14697	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCCCACAGTGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	165680794	165654404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165675227_165675345_165676809_165676888_165679200_165679257_165680731
ENSMUSG00000039671.19_165654762_165688071_1	chr2	-	1476	11	NNC	ENSMUSG00000039671.19	novel	3283	20	NA	NA	12022	14340	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATGTTTATACAGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	165688071	165654761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165675227_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940
ENSMUSG00000039671.19_165657308_165694068_1	chr2	-	1549	11	ISM	ENSMUSG00000039671.19	ENST00000617418.4	3283	20	23629	28224	6025	11794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCGGCAGATTCGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	165694068	165657307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165657390_165662461_165662609_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919
ENSMUSG00000039671.19_165662462_165717697_1	chr2	-	1540	11	ISM	ENSMUSG00000039671.19	ENST00000617418.4	3283	20	0	33378	0	6640	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTGGCGTTTCAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	165717697	165662461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_165662609_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624
ENSMUSG00000039671.19_165670308_165694042_1	chr2	-	1190	9	NNC	ENSMUSG00000039671.19	novel	3394	21	NA	NA	6051	-1206	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTGAGCGGGGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	165694042	165670307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_165670610_165675227_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919
ENSMUSG00000039671.19_165670435_165717697_1	chr2	-	1162	10	NNC	ENSMUSG00000039671.19	novel	3394	21	NA	NA	0	-1333	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAACCAGTACCAAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	165717697	165670434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_165670610_165675227_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624
ENSMUSG00000039682.13_45650716_45669771_1	chr5	+	2005	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	0	262	0	-262	multi-exon	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGTCTACAGAGTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	45650715	45669771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ENSMUSG00000039682.13_45650846_45669831_1	chr5	+	1935	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	130	202	130	-202	multi-exon	FALSE	canonical	NA	NA	NA	NA	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGCAAAACAAAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	45650845	45669831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ENSMUSG00000039682.13_45650846_45669855_2	chr5	+	1959	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	130	178	130	-178	multi-exon	FALSE	canonical	NA	NA	NA	NA	1605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAACGCATACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	45650845	45669855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ENSMUSG00000039682.13_45650846_45669904_1	chr5	+	2008	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	130	129	130	-129	multi-exon	FALSE	canonical	NA	NA	NA	NA	2008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGACTTTGTTATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	45650845	45669904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ENSMUSG00000039682.13_45652574_45670034_1	chr5	+	2014	12	ISM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	1858	-1	1858	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTCTGTGAAGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	45652573	45670034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ENSMUSG00000039693.12_48540546_48552830_1	chr4	+	474	2	ISM	ENSMUSG00000039693.12	ENST00000374885.5	768	4	86	8162	47	-8162	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCCCTCCGCACGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	48540545	48552830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48540569_48552379
ENSMUSG00000039693.12_48540546_48555877_1	chr4	+	533	3	ISM	ENSMUSG00000039693.12	ENST00000374885.5	768	4	86	5115	47	-5115	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAAGGTTTGAACACTGT	NA	NA	NA	NA	NA	NA	NA	NA	48540545	48555877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48540569_48552379_48552831_48555818
ENSMUSG00000039693.12_48552429_48560904_1	chr4	+	522	3	ISM	ENSMUSG00000039693.12	ENST00000374885.5	768	4	11969	88	11930	-88	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGTGAGGGGACCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	48552428	48560904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48552831_48555818_48555878_48560843
ENSMUSG00000039693.12_48552568_48560988_1	chr4	+	463	3	NNC	ENSMUSG00000039693.12	novel	768	4	NA	NA	12069	-4	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGAAGGTGCTTTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	48552567	48560988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_48552831_48555818_48555878_48560847
ENSMUSG00000039703.16_120275386_120300490_1	chr11	-	609	6	ISM	ENSMUSG00000039703.16	ENST00000374747.9	1809	16	27979	1269	27979	-1269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCCGCTGCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	120300490	120275385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437
ENSMUSG00000039703.16_120276595_120302570_1	chr11	-	616	6	ISM	ENSMUSG00000039703.16	ENST00000374747.9	1809	16	25899	2478	25899	-2478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCTTTGTCTTAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	120302570	120276594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483
ENSMUSG00000039703.16_120280198_120304510_1	chr11	-	640	6	ISM	ENSMUSG00000039703.16	ENST00000374747.9	1809	16	23959	6081	23959	-6081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTAAGTACTCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	120304510	120280197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385
ENSMUSG00000039703.16_120295091_120307097_1	chr11	-	583	6	ISM	ENSMUSG00000039703.16	ENST00000374747.9	1809	16	21372	20974	21372	-20974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGGCTATGCTAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	120307097	120295090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082
ENSMUSG00000039703.16_120295091_120307158_1	chr11	-	644	6	ISM	ENSMUSG00000039703.16	ENST00000374747.9	1809	16	21311	20974	21311	-20974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGGCTATGCTAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	120307158	120295090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082
ENSMUSG00000039703.16_120299661_120309133_1	chr11	-	591	6	ISM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	19401	28465	19336	-25544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCCGGCTCTCTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	120309133	120299660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070
ENSMUSG00000039703.16_120302527_120312291_1	chr11	-	593	6	ISM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	16243	31331	16178	-28410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTGGTTGACGAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	120312291	120302526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190
ENSMUSG00000039703.16_120304466_120319436_1	chr11	-	632	6	ISM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	9098	33270	9033	-30349	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACGGACGGTACACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	120319436	120304465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349
ENSMUSG00000039703.16_120307083_120323954_1	chr11	-	639	6	ISM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	4580	35887	4515	-32966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCAGCCTATGTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	120323954	120307082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873
ENSMUSG00000039703.16_120309066_120328398_1	chr11	-	594	6	ISM	ENSMUSG00000039703.16	ENST00000374747.9	1809	16	71	34949	71	-34949	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTCTGTGTCCCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	120328398	120309065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ENSMUSG00000039706.12_44629866_44636481_1	chr5	-	1303	2	ISM	ENSMUSG00000039706.12	ENST00000502640.5	2682	8	320510	379	320463	-379	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCCATGGGTCCGAAT	NA	NA	NA	NA	NA	NA	NA	NA	44636481	44629865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_44631122_44636434
ENSMUSG00000039706.12_44629900_44636553_1	chr5	-	1341	2	ISM	ENSMUSG00000039706.12	ENST00000502640.5	2682	8	320438	413	320391	-413	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAATGGACCCTGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	44636553	44629899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_44631122_44636434
ENSMUSG00000039706.12_44630034_44637692_1	chr5	-	1365	3	ISM	ENSMUSG00000039706.12	ENST00000502640.5	2682	8	319299	547	319252	-547	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACACAGCTAGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	44637692	44630033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_44631122_44636434_44636587_44637567
ENSMUSG00000039706.12_44630140_44690086_1	chr5	-	1342	4	ISM	ENSMUSG00000039706.12	ENST00000502640.5	2682	8	266905	653	266858	-653	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTAAAAAAAGAAAAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	44690086	44630139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_44631122_44636434_44636587_44637567_44637692_44690002
ENSMUSG00000039706.12_44630242_44692499_1	chr5	-	1360	5	ISM	ENSMUSG00000039706.12	ENST00000502640.5	2682	8	264492	755	264445	-755	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTAACGGGC	NA	NA	NA	NA	NA	NA	NA	NA	44692499	44630241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_44631122_44636434_44636587_44637567_44637692_44690002_44690087_44692379
ENSMUSG00000039706.12_44630412_44699201_1	chr5	-	1366	6	ISM	ENSMUSG00000039706.12	ENST00000502640.5	2682	8	257790	925	257743	-925	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTGGCCTCTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	44699201	44630411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_44631122_44636434_44636587_44637567_44637692_44690002_44690087_44692379_44692503_44699028
ENSMUSG00000039706.12_44630527_44826803_1	chr5	-	1356	7	ISM	ENSMUSG00000039706.12	ENST00000502640.5	2682	8	130188	1040	130141	-1040	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACACACAAGCAAAACGT	NA	NA	NA	NA	NA	NA	NA	NA	44826803	44630526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_44631122_44636434_44636587_44637567_44637692_44690002_44690087_44692379_44692503_44699028_44699202_44826698
ENSMUSG00000039706.12_44630816_44956944_1	chr5	-	1306	8	FSM	ENSMUSG00000039706.12	ENST00000502640.5	2682	8	47	1329	0	-1329	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGGGGACGAGGACGA	NA	NA	NA	NA	NA	NA	NA	NA	44956944	44630815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_44631122_44636434_44636587_44637567_44637692_44690002_44690087_44692379_44692503_44699028_44699202_44826698_44826802_44956703
ENSMUSG00000039715.9_29921558_29928295_1	chr2	-	1473	8	ISM	ENSMUSG00000039715.9	ENSMUST00000113711.3	1814	9	10598	0	10598	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGAGCCCCAAGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	29928295	29921557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_29921985_29922084_29922243_29922413_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186
ENSMUSG00000039715.9_29921558_29928324_1	chr2	-	1502	8	ISM	ENSMUSG00000039715.9	ENSMUST00000113711.3	1814	9	10569	0	10569	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGAGCCCCAAGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	29928324	29921557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_29921985_29922084_29922243_29922413_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186
ENSMUSG00000039715.9_29921924_29938873_1	chr2	-	1428	9	FSM	ENSMUSG00000039715.9	ENSMUST00000113711.3	1814	9	20	366	20	-366	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAAGATGGAAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	29938873	29921923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_29921985_29922084_29922243_29922413_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
ENSMUSG00000039720.8_27687959_27690811_1	chr8	-	836	7	FSM	ENSMUSG00000039720.8	ENST00000307599.5	958	7	122	0	122	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTAAGTTCGAGAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	27690811	27687958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_27688099_27688420_27688587_27689294_27689446_27689537_27689652_27689884_27689976_27690260_27690373_27690749
ENSMUSG00000039720.8_27688420_27690931_1	chr8	-	817	6	ISM	ENSMUSG00000039720.8	ENST00000307599.5	958	7	2	461	2	-461	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGGTGAGAGGGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	27690931	27688419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_27688587_27689294_27689446_27689537_27689652_27689884_27689976_27690260_27690373_27690749
ENSMUSG00000039725.7_165333351_165335141_1	chr2	-	456	2	FSM	ENSMUSG00000039725.7	ENSMUST00000039007.7	1880	2	103	1321	103	-1321	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAGGACTGCCGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	165335141	165333350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_165333632_165334966
ENSMUSG00000039725.7_165333351_165335244_1	chr2	-	559	2	FSM	ENSMUSG00000039725.7	ENSMUST00000039007.7	1880	2	0	1321	0	-1321	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAGGACTGCCGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	165335244	165333350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_165333632_165334966
ENSMUSG00000039735.17_122332368_122338341_1	chr3	-	2514	3	ISM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	74998	0	74998	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTACTTATCTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	122338341	122332367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_122334574_122335773_122335933_122338192
ENSMUSG00000039735.17_122332546_122340634_1	chr3	-	2474	5	ISM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	72705	178	72705	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAACCATTCTTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	122340634	122332545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591
ENSMUSG00000039735.17_122332674_122342843_1	chr3	-	2475	6	ISM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	70496	306	70496	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTGTGTTTTTCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	122342843	122332673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804
ENSMUSG00000039735.17_122332824_122350119_1	chr3	-	2468	7	ISM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	63220	456	63220	-450	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTTTATTTCAAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	122350119	122332823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342928_122350060
ENSMUSG00000039735.17_122332872_122350176_1	chr3	-	2477	7	ISM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	63163	504	63163	-498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATTCTATACTGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	122350176	122332871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342928_122350060
ENSMUSG00000039735.17_122332998_122351623_1	chr3	-	2466	8	ISM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	61716	630	61716	-624	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGCCTTCATAAGATCAA	NA	NA	NA	NA	NA	NA	NA	NA	122351623	122332997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342928_122350060_122350220_122351551
ENSMUSG00000039735.17_122333051_122351682_1	chr3	-	2472	8	ISM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	61657	683	61657	-677	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAATCATACTACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	122351682	122333050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342928_122350060_122350220_122351551
ENSMUSG00000039735.17_122333153_122352690_1	chr3	-	2465	9	ISM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	60649	785	60649	-779	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGTGAGGGGAGAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	122352690	122333152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342928_122350060_122350220_122351551_122351756_122352668
ENSMUSG00000039735.17_122333200_122352746_1	chr3	-	2474	9	ISM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	60593	832	60593	-826	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGATTGTTTGTACCACT	NA	NA	NA	NA	NA	NA	NA	NA	122352746	122333199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342928_122350060_122350220_122351551_122351756_122352668
ENSMUSG00000039735.17_122333302_122354506_1	chr3	-	2466	10	ISM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	58833	934	58833	-928	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCCTCATTGCTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	122354506	122333301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342928_122350060_122350220_122351551_122351756_122352668_122352816_122354481
ENSMUSG00000039735.17_122333403_122357530_1	chr3	-	2516	11	ISM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	55809	1035	55809	-1029	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAGATAAAATTCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	122357530	122333402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342928_122350060_122350220_122351551_122351756_122352668_122352816_122354481_122354611_122357483
ENSMUSG00000039735.17_122333620_122363290_1	chr3	-	2467	13	ISM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	50049	1252	50049	-1246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCCTCGGTAGGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	122363290	122333619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342928_122350060_122350220_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243
ENSMUSG00000039735.17_122333661_122363352_1	chr3	-	2488	13	ISM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	49987	1293	49987	-1287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGCTCCGCCTCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	122363352	122333660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342928_122350060_122350220_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243
ENSMUSG00000039735.17_122333881_122413260_1	chr3	-	2559	16	FSM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	79	1513	79	-1507	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTGCAGCCCAGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	122413260	122333880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342928_122350060_122350220_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
ENSMUSG00000039735.17_122333977_122413364_1	chr3	-	2567	16	FSM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	-25	1609	0	-1603	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACTTCCCTACTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	122413364	122333976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342928_122350060_122350220_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
ENSMUSG00000039735.17_122334037_122413364_1	chr3	-	2507	16	FSM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	-25	1669	0	-1663	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCACTTTGTCAGACACC	NA	NA	NA	NA	NA	NA	NA	NA	122413364	122334036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342928_122350060_122350220_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
ENSMUSG00000039737.12_136207441_136223166_1	chr5	-	3080	4	ISM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	4651	460	4651	-460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGGTGTGGTTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	136223166	136207440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150
ENSMUSG00000039737.12_136207567_136226712_1	chr5	-	3118	5	ISM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	1105	586	1105	-586	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTGGTTTTGGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	136226712	136207566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633
ENSMUSG00000039737.12_136207672_136227764_1	chr5	-	3149	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	53	691	53	-691	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCAAAGGTATTTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	136227764	136207671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
ENSMUSG00000039737.12_136207720_136227764_1	chr5	-	3101	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	53	739	53	-739	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAATGTAGTTTTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	136227764	136207719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
ENSMUSG00000039745.9_49409316_49423594_1	chr7	+	1080	5	ISM	ENSMUSG00000039745.9	ENSMUST00000207895.2	1338	6	415	129	-16	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCACTACAGGCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	49409315	49423594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ENSMUSG00000039745.9_49409403_49423069_1	chr7	+	330	4	FSM	ENSMUSG00000039745.9	ENST00000531058.1	583	4	71	182	71	-182	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCTCGTCCAGGCGAAT	NA	NA	NA	NA	NA	NA	NA	NA	49409402	49423069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_49409542_49411807_49411916_49422323_49422386_49423048
ENSMUSG00000039745.9_49409462_49423120_1	chr7	+	322	4	FSM	ENSMUSG00000039745.9	ENST00000531058.1	583	4	130	131	130	-131	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCTTGGGCCAGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	49409461	49423120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_49409542_49411807_49411916_49422323_49422386_49423048
ENSMUSG00000039745.9_49409506_49423180_1	chr7	+	338	4	FSM	ENSMUSG00000039745.9	ENST00000531058.1	583	4	174	71	174	-71	multi-exon	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGGTGAGTCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	49409505	49423180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_49409542_49411807_49411916_49422323_49422386_49423048
ENSMUSG00000039748.12_175723765_175738789_1	chr1	+	4063	6	ISM	ENSMUSG00000039748.12	ENSMUST00000039725.12	7796	15	15618	2266	15618	-2266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAACTTTCCAAGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	175723764	175738789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ENSMUSG00000039756.13_122068067_122069744_1	chr3	+	959	2	ISM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	30	9176	30	-9176	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGAGTCTTTCTGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	122068066	122069744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122068128_122068846
ENSMUSG00000039756.13_122068067_122069859_1	chr3	+	1074	2	ISM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	30	9061	30	-9061	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATGAAATCATTAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	122068066	122069859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122068128_122068846
ENSMUSG00000039756.13_122069666_122074472_1	chr3	+	1029	3	ISM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	1629	4448	1629	-4448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGGGGCTTTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	122069665	122074472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122070460_122072394_122072534_122074376
ENSMUSG00000039756.13_122069784_122076042_1	chr3	+	976	4	ISM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	1747	2878	1747	-2878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAAAATGACCTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	122069783	122076042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122070460_122072394_122072534_122074376_122074473_122075977
ENSMUSG00000039756.13_122069919_122078057_1	chr3	+	956	5	ISM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	1882	863	1882	-863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATCCAGCCGACTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	122069918	122078057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042
ENSMUSG00000039756.13_122069974_122078116_1	chr3	+	960	5	ISM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	1937	804	1937	-804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAAGAACTGCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	122069973	122078116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042
ENSMUSG00000039756.13_122070094_122078797_1	chr3	+	968	6	ISM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	2057	123	2057	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTTACAAGCAAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	122070093	122078797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
ENSMUSG00000039756.13_122070163_122078898_1	chr3	+	1000	6	ISM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	2126	22	2126	-22	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGATTACTGACAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	122070162	122078898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
ENSMUSG00000039756.13_122070228_122078920_1	chr3	+	957	6	ISM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	2191	0	2191	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGCCTCTTGGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	122070227	122078920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
ENSMUSG00000039759.11_152067096_152068221_1	chr4	-	844	2	ISM	ENSMUSG00000039759.11	ENSMUST00000036680.8	1124	4	5233	0	5192	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGGCTGTCACTCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	152068221	152067095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152067810_152068091
ENSMUSG00000039759.11_152067259_152073427_1	chr4	-	934	4	FSM	ENSMUSG00000039759.11	ENSMUST00000036680.8	1124	4	27	163	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGAGAGCTGGTCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	152073427	152067258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_152067810_152068091_152068194_152070125_152070319_152073339
ENSMUSG00000039759.11_152067596_152068158_1	chr4	-	271	2	ISM	ENSMUSG00000039759.11	ENST00000401022.2	432	3	5255	0	5255	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGCCGCCTGAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	152068158	152067595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152067800_152068091
ENSMUSG00000039759.11_152067596_152068158_2	chr4	-	281	2	ISM	ENSMUSG00000039759.11	ENST00000307896.10	667	4	5293	0	5255	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGCCGCCTGAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	152068158	152067595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152067810_152068091
ENSMUSG00000039759.11_152067741_152070324_1	chr4	-	416	3	ISM	ENSMUSG00000039759.11	ENST00000307896.10	667	4	3127	145	3089	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGCCCCTTCCGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	152070324	152067740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152067810_152068091_152068222_152070107
ENSMUSG00000039759.11_152067741_152073427_1	chr4	-	301	3	FSM	ENSMUSG00000039759.11	ENST00000634580.1	435	3	-11	145	0	-145	multi-exon	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGCCCCTTCCGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	152073427	152067740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_152067800_152068091_152068231_152073324
ENSMUSG00000039765.16_43819688_43845603_1	chr5	+	850	7	ISM	ENSMUSG00000039765.16	ENST00000424120.6	4782	34	-28	52705	0	-52705	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGGGACCGCGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	43819687	43845603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43819767_43838630_43838720_43839040_43839146_43840441_43840544_43841381_43841556_43842599_43842763_43845465
ENSMUSG00000039765.16_43839062_43861243_1	chr5	+	1448	11	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	431	37065	431	-37065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGAGGAGGAAGAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	43839061	43861243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43839146_43840441_43840544_43841381_43841556_43842599_43842763_43845465_43845603_43846259_43846392_43852426_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202
ENSMUSG00000039765.16_43841379_43852636_1	chr5	+	819	5	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	2748	45672	2748	-45672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTTGTGTTCTCCGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	43841378	43852636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43841556_43842599_43842763_43845465_43845603_43846259_43846392_43852426
ENSMUSG00000039765.16_43841477_43863475_1	chr5	+	1445	10	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	2846	34833	2846	-34833	internal_fragment	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGACTGTTAGCCGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	43841476	43863475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43841556_43842599_43842763_43845465_43845603_43846259_43846392_43852426_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202_43861445_43863398
ENSMUSG00000039765.16_43841489_43853937_1	chr5	+	779	6	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	2858	44371	2858	-44371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAGAAAACCATCAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	43841488	43853937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43841556_43842599_43842763_43845465_43845603_43846259_43846392_43852426_43852637_43853867
ENSMUSG00000039765.16_43842691_43864139_1	chr5	+	1431	10	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	4060	34169	4060	-34169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCCCTGAGACGACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	43842690	43864139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43842763_43845465_43845603_43846259_43846392_43852426_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202_43861445_43863398_43863577_43864084
ENSMUSG00000039765.16_43845464_43864241_1	chr5	+	1463	9	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	6833	34067	6833	-34067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAAAGCTAGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	43845463	43864241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43845603_43846259_43846392_43852426_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202_43861445_43863398_43863577_43864084
ENSMUSG00000039765.16_43846300_43861285_1	chr5	+	790	6	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	7669	37023	7669	-37023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTACTAAGCCCATTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	43846299	43861285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43846392_43852426_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202
ENSMUSG00000039765.16_43852559_43863471_1	chr5	+	798	6	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	13928	34837	13928	-34837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCGAGGACTGTTAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	43852558	43863471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202_43861445_43863398
ENSMUSG00000039765.16_43852575_43869680_1	chr5	+	1430	10	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	13944	28628	13944	-28628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGGTTCCGACTTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	43852574	43869680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202_43861445_43863398_43863577_43864084_43864242_43866385_43866534_43867846_43867986_43869581
ENSMUSG00000039765.16_43860561_43875979_1	chr5	+	1467	10	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	21930	22329	21930	-22329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACCTGTCTGATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	43860560	43875979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43860690_43861202_43861445_43863398_43863577_43864084_43864242_43866385_43866534_43867846_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43875894
ENSMUSG00000039765.16_43861200_43867985_1	chr5	+	867	5	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	22569	30323	22569	-30323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACGGCCAGAGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	43861199	43867985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43861445_43863398_43863577_43864084_43864242_43866385_43866534_43867846
ENSMUSG00000039765.16_43861200_43877788_1	chr5	+	1530	10	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	22569	20520	22569	-20520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGAACAAGGCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	43861199	43877788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43861445_43863398_43863577_43864084_43864242_43866385_43866534_43867846_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43875894_43876063_43877682
ENSMUSG00000039765.16_43861357_43879829_1	chr5	+	1472	11	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	22726	18479	22726	-18479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCGTTCAGGTAAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	43861356	43879829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43861445_43863398_43863577_43864084_43864242_43866385_43866534_43867846_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43875894_43876063_43877682_43877789_43879730
ENSMUSG00000039765.16_43864150_43887284_1	chr5	+	1434	12	ISM	ENSMUSG00000039765.16	ENST00000674945.1	4554	32	25519	11024	25519	-11024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCACCACAGTGACTGACA	NA	NA	NA	NA	NA	NA	NA	NA	43864149	43887284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43864242_43866385_43866534_43867846_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43875894_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43887198
ENSMUSG00000039765.16_43866455_43889773_1	chr5	+	1445	12	ISM	ENSMUSG00000039765.16	ENST00000674945.1	4554	32	27824	8535	27824	-8535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGAGTCTGTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	43866454	43889773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43866534_43867846_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43875894_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43887198_43887403_43889719
ENSMUSG00000039765.16_43867845_43891284_1	chr5	+	1519	12	ISM	ENSMUSG00000039765.16	ENST00000674945.1	4554	32	29214	7024	29214	-7024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGCCACTTAGGGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	43867844	43891284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43875894_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43887198_43887403_43889719_43889810_43891169
ENSMUSG00000039765.16_43869582_43892792_1	chr5	+	1512	12	ISM	ENSMUSG00000039765.16	ENST00000674945.1	4554	32	30951	5516	30951	-5516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATTACCATTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	43869581	43892792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43869786_43871850_43871944_43873095_43873188_43875894_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43887198_43887403_43889719_43889810_43891169_43891284_43892657
ENSMUSG00000039765.16_43871849_43894897_1	chr5	+	1493	13	ISM	ENSMUSG00000039765.16	ENST00000674945.1	4554	32	33218	3411	33218	-3411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAAAATACCCATAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	43871848	43894897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43871944_43873095_43873188_43875894_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837
ENSMUSG00000039765.16_43871878_43883626_1	chr5	+	827	8	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	33247	14682	33247	-14682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCGAAGCTTGAGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	43871877	43883626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43871944_43873095_43873188_43875894_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43883537
ENSMUSG00000039765.16_43873096_43896659_1	chr5	+	1417	13	ISM	ENSMUSG00000039765.16	ENST00000674945.1	4554	32	34465	1649	34465	-1649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCATGGACTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	43873095	43896659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43873188_43875894_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837_43894897_43896639
ENSMUSG00000039765.16_43875893_43896817_1	chr5	+	1485	12	ISM	ENSMUSG00000039765.16	ENST00000674945.1	4554	32	37262	1491	37262	-1491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCATGCGTGTGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	43875892	43896817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837_43894897_43896639
ENSMUSG00000039765.16_43875923_43887252_1	chr5	+	783	7	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	37292	11056	37292	-11056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGCCTTAAAATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	43875922	43887252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43883537_43883715_43887198
ENSMUSG00000039765.16_43875965_43887324_1	chr5	+	813	7	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	37334	10984	37334	-10984	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACGCGTTATCTCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	43875964	43887324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43883537_43883715_43887198
ENSMUSG00000039765.16_43876035_43887360_1	chr5	+	779	7	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	37404	10948	37404	-10948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCCTTCACGTCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	43876034	43887360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43883537_43883715_43887198
ENSMUSG00000039765.16_43877681_43889809_1	chr5	+	885	7	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	39050	8499	39050	-8499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTTCCTCCCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	43877680	43889809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43883537_43883715_43887198_43887403_43889719
ENSMUSG00000039765.16_43877720_43898190_1	chr5	+	1461	12	ISM	ENSMUSG00000039765.16	ENST00000674945.1	4554	32	39089	118	39089	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAATTTTTCAATGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	43877719	43898190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837_43894897_43896639_43896818_43898007
ENSMUSG00000039765.16_43879728_43891283_1	chr5	+	894	7	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	41097	7025	41097	-7025	internal_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGCCACTTAGGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	43879727	43891283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43879841_43881042_43881140_43881615_43881715_43883537_43883715_43887198_43887403_43889719_43889810_43891169
ENSMUSG00000039765.16_43879728_43898314_1	chr5	+	1519	11	ISM	ENSMUSG00000039765.16	ENST00000674945.1	4554	32	41097	-6	41097	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTAGTCTGTCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	43879727	43898314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43879841_43881042_43881140_43881615_43881715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837_43894897_43896639_43896818_43898007
ENSMUSG00000039765.16_43881055_43892738_1	chr5	+	850	7	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	42424	5570	42424	-5570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGCATTTTGCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	43881054	43892738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43881140_43881615_43881715_43883537_43883715_43887198_43887403_43889719_43889810_43891169_43891284_43892657
ENSMUSG00000039765.16_43881688_43893412_1	chr5	+	784	7	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	43057	4896	43057	-4896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAAATTTTGATGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	43881687	43893412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43881715_43883537_43883715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375
ENSMUSG00000039765.16_43883676_43896663_1	chr5	+	788	8	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	45045	1645	45045	-1645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGACTGGAGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	43883675	43896663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43883715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837_43894897_43896639
ENSMUSG00000039765.16_43887331_43898059_1	chr5	+	823	8	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	48700	249	48700	-249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGGTGTATAGCACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	43887330	43898059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837_43894897_43896639_43896818_43898007
ENSMUSG00000039768.17_152018148_152065193_1	chr4	+	1750	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	0	1401	0	-489	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACCTCGAGGAAAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	152018147	152065193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039768.17_152034849_152065392_1	chr4	+	1817	15	ISM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	16701	1202	16701	-290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACGGCCATGTCTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	152034848	152065392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039768.17_152034919_152063944_1	chr4	+	1129	12	ISM	ENSMUSG00000039768.17	ENST00000294401.11	2140	15	16828	1738	16771	-1738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGCAGGAAGAACGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	152034918	152063944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152062455_152062526_152063728_152063787_152063900
ENSMUSG00000039768.17_152037297_152065498_1	chr4	+	1793	14	ISM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	19149	1096	19149	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCACACATGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	152037296	152065498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039768.17_152041600_152064504_1	chr4	+	1182	11	ISM	ENSMUSG00000039768.17	ENST00000294401.11	2140	15	23509	1178	23452	-1178	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTAACTGCCTCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	152041599	152064504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152062455_152062526_152063728_152063787_152063900_152064044_152064374
ENSMUSG00000039768.17_152052950_152065193_1	chr4	+	1160	11	ISM	ENSMUSG00000039768.17	ENST00000294401.11	2140	15	34859	489	34802	-489	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACCTCGAGGAAAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	152052949	152065193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039768.17_152052950_152065682_1	chr4	+	1805	12	ISM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	34802	912	34802	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTGGAAACTAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	152052949	152065682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039768.17_152054272_152065392_1	chr4	+	1255	10	ISM	ENSMUSG00000039768.17	ENST00000294401.11	2140	15	36181	290	36124	-290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACGGCCATGTCTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	152054271	152065392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039768.17_152054272_152065814_1	chr4	+	1828	11	NNC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	36124	132	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCTAAGAGAAGAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	152054271	152065814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058658_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039768.17_152055312_152065498_1	chr4	+	1209	9	ISM	ENSMUSG00000039768.17	ENST00000294401.11	2140	15	37221	184	37164	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCACACATGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	152055311	152065498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039768.17_152055312_152065828_1	chr4	+	1695	10	ISM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	37164	766	37164	146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCTGCTGCCAGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	152055311	152065828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039768.17_152055339_152065911_1	chr4	+	1751	10	ISM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	37191	683	37191	229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGGGGACCTATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	152055338	152065911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039768.17_152058055_152066089_1	chr4	+	1762	9	ISM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	39907	505	39907	407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTACTGGATGTCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	152058054	152066089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039768.17_152058214_152065682_1	chr4	+	1130	7	ISM	ENSMUSG00000039768.17	ENST00000294401.11	2140	15	40123	0	40066	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTGGAAACTAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	152058213	152065682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152058303_152058653_152058771_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039768.17_152058284_152066248_1	chr4	+	1782	8	ISM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	40136	346	40136	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTTTTTGAGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	152058283	152066248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039768.17_152058742_152066349_1	chr4	+	1776	7	ISM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	40594	245	40594	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTCTGTCTAAAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	152058741	152066349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039768.17_152062456_152066594_1	chr4	+	1836	5	ISM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	44308	0	44308	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGGCTATGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	152062455	152066594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039770.7_73144531_73155829_1	chr17	+	593	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233210.2	2419	3	223	1603	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCCTTCACTGAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	73144530	73155829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_73144704_73153273_73153439_73155574
ENSMUSG00000039770.7_73153322_73156110_1	chr17	+	653	2	ISM	ENSMUSG00000039770.7	ENSMUST00000233886.2	704	3	8791	-281	8791	281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGAGTGTTTTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	73153321	73156110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_73153439_73155574
ENSMUSG00000039781.15_119955256_119963802_1	chr11	-	2380	17	ISM	ENSMUSG00000039781.15	ENSMUST00000106227.8	3578	26	13851	0	13851	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTCACCTGCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	119963802	119955255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663
ENSMUSG00000039781.15_119956253_119966491_1	chr11	-	2337	18	ISM	ENSMUSG00000039781.15	ENSMUST00000106227.8	3578	26	11162	997	11162	-997	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCGCCAGCAGGTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	119966491	119956252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389
ENSMUSG00000039782.16_43391430_43394889_1	chr5	+	1242	2	ISM	ENSMUSG00000039782.16	ENST00000345451.8	3093	10	518	48644	518	-48644	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGGACAGACAACAATAG	NA	NA	NA	NA	NA	NA	NA	NA	43391429	43394889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43392432_43394649
ENSMUSG00000039782.16_43391768_43435973_1	chr5	+	1286	6	ISM	ENSMUSG00000039782.16	ENST00000345451.8	3093	10	856	7560	856	-7560	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACCTTTGGTAGTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	43391767	43435973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43392432_43394649_43394932_43401928_43402020_43419076_43419128_43434773_43434945_43435946
ENSMUSG00000039782.16_43391789_43401947_1	chr5	+	953	3	ISM	ENSMUSG00000039782.16	ENST00000382401.8	6636	10	877	45120	877	-41586	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTGAATATGCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	43391788	43401947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43392432_43394649_43394941_43401928
ENSMUSG00000039782.16_43391840_43436003_1	chr5	+	1244	6	ISM	ENSMUSG00000039782.16	ENST00000345451.8	3093	10	928	7530	928	-7530	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAGAAAGTAAATCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	43391839	43436003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43392432_43394649_43394932_43401928_43402020_43419076_43419128_43434773_43434945_43435946
ENSMUSG00000039782.16_43391854_43401999_1	chr5	+	940	3	ISM	ENSMUSG00000039782.16	ENST00000382401.8	6636	10	942	45068	942	-41534	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCACGATCCTCTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	43391853	43401999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43392432_43394649_43394941_43401928
ENSMUSG00000039782.16_43392007_43434944_1	chr5	+	1029	5	ISM	ENSMUSG00000039782.16	ENST00000382401.8	6636	10	1095	12123	1095	-8589	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTATCCTGCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	43392006	43434944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43392432_43394649_43394941_43401928_43402020_43419076_43419128_43434773
ENSMUSG00000039782.16_43392007_43438828_1	chr5	+	1344	8	ISM	ENSMUSG00000039782.16	ENST00000345451.8	3093	10	1095	4705	1095	-4705	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAGAATCTCTAAATC	NA	NA	NA	NA	NA	NA	NA	NA	43392006	43438828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43392432_43394649_43394932_43401928_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713
ENSMUSG00000039782.16_43392345_43443082_1	chr5	+	1209	10	FSM	ENSMUSG00000039782.16	ENST00000345451.8	3093	10	1433	451	1433	-451	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGATGACCAGATGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	43392344	43443082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_43392432_43394649_43394932_43401928_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
ENSMUSG00000039782.16_43392381_43443131_1	chr5	+	1222	10	FSM	ENSMUSG00000039782.16	ENST00000345451.8	3093	10	1469	402	1469	-402	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCCCCCTTTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	43392380	43443131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_43392432_43394649_43394932_43401928_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
ENSMUSG00000039782.16_43392393_43443192_1	chr5	+	1271	10	FSM	ENSMUSG00000039782.16	ENST00000345451.8	3093	10	1481	341	1481	-341	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAATATCCACTCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	43392392	43443192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_43392432_43394649_43394932_43401928_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
ENSMUSG00000039782.16_43394778_43443345_1	chr5	+	1257	9	ISM	ENSMUSG00000039782.16	ENST00000345451.8	3093	10	3866	188	3866	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAAGACACTGACGTGC	NA	NA	NA	NA	NA	NA	NA	NA	43394777	43443345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43394932_43401928_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
ENSMUSG00000039782.16_43394826_43443399_1	chr5	+	1258	9	NNC	ENSMUSG00000039782.16	novel	3093	10	NA	NA	3914	-134	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTCGATACATGCATCG	NA	NA	NA	NA	NA	NA	NA	NA	43394825	43443399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_43394932_43401928_43402020_43419076_43419128_43434773_43434945_43435951_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
ENSMUSG00000039782.16_43394855_43443404_1	chr5	+	1239	9	ISM	ENSMUSG00000039782.16	ENST00000345451.8	3093	10	3943	129	3943	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGATACATGCATCGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	43394854	43443404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43394932_43401928_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
ENSMUSG00000039782.16_43401922_43443533_1	chr5	+	1298	8	ISM	ENSMUSG00000039782.16	ENST00000345451.8	3093	10	11010	0	11010	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTTATTTTTATATGT	NA	NA	NA	NA	NA	NA	NA	NA	43401921	43443533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
ENSMUSG00000039782.16_43441320_43443877_1	chr5	+	958	2	ISM	ENSMUSG00000039782.16	ENST00000345451.8	3093	10	50408	-344	50408	344	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTGCTGCTATATAGG	NA	NA	NA	NA	NA	NA	NA	NA	43441319	43443877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43441462_43443061
ENSMUSG00000039782.16_43441413_43443951_1	chr5	+	939	2	ISM	ENSMUSG00000039782.16	ENST00000345451.8	3093	10	50501	-418	50501	418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTGCGGATGAAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	43441412	43443951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_43441462_43443061
ENSMUSG00000039787.14_29759556_29771749_1	chr2	+	1562	12	FSM	ENSMUSG00000039787.14	ENSMUST00000047521.7	2715	12	50	1103	50	-1103	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGCTAGGCCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	29759555	29771749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_29759738_29761034_29761146_29761286_29761405_29762574_29762710_29762819_29763025_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
ENSMUSG00000039787.14_29759677_29771805_1	chr2	+	1497	12	FSM	ENSMUSG00000039787.14	ENSMUST00000047521.7	2715	12	171	1047	171	-1047	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCAGTGACACAGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	29759676	29771805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_29759738_29761034_29761146_29761286_29761405_29762574_29762710_29762819_29763025_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
ENSMUSG00000039787.14_29761343_29772032_1	chr2	+	1496	10	ISM	ENSMUSG00000039787.14	ENSMUST00000047521.7	2715	12	1837	820	1837	-820	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTCTCTCCCATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	29761342	29772032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29761405_29762574_29762710_29762819_29763025_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
ENSMUSG00000039787.14_29762907_29772303_1	chr2	+	1483	8	ISM	ENSMUSG00000039787.14	ENSMUST00000047521.7	2715	12	3401	549	3401	-549	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCCTCTGGACTCATT	NA	NA	NA	NA	NA	NA	NA	NA	29762906	29772303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29763025_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
ENSMUSG00000039787.14_29765657_29772522_1	chr2	+	1544	7	ISM	ENSMUSG00000039787.14	ENSMUST00000047521.7	2715	12	6151	330	6151	-330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATTAAAGGCGTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	29765656	29772522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
ENSMUSG00000039787.14_29768021_29772852_1	chr2	+	1605	4	ISM	ENSMUSG00000039787.14	ENSMUST00000047521.7	2715	12	8515	0	8515	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACAGCTGAGCCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	29768020	29772852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29768149_29770624_29770753_29770926_29771131_29771707
ENSMUSG00000039787.14_29768103_29772852_1	chr2	+	1523	4	ISM	ENSMUSG00000039787.14	ENSMUST00000047521.7	2715	12	8597	0	8597	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACAGCTGAGCCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	29768102	29772852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29768149_29770624_29770753_29770926_29771131_29771707
ENSMUSG00000039795.15_10405742_10406212_1	chr3	-	383	2	ISM	ENSMUSG00000039795.15	ENSMUST00000108377.8	936	8	10161	63	7402	32	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGTCAGCTTTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	10406212	10405741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_10405966_10406053
ENSMUSG00000039795.15_10405877_10409928_1	chr3	-	309	3	ISM	ENSMUSG00000039795.15	ENSMUST00000108377.8	936	8	6445	198	3686	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAATGGAGGAAATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	10409928	10405876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_10405966_10406053_10406206_10409860
ENSMUSG00000039795.15_10405877_10409983_1	chr3	-	360	3	ISM	ENSMUSG00000039795.15	ENST00000521895.5	727	6	3631	103	3631	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAATGGAGGAAATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	10409983	10405876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_10405958_10406053_10406210_10409860
ENSMUSG00000039795.15_10405877_10411012_1	chr3	-	377	4	ISM	ENSMUSG00000039795.15	ENST00000521895.5	727	6	2602	103	2602	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	988	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAATGGAGGAAATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	10411012	10405876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_10405958_10406053_10406210_10409860_10409983_10410994
ENSMUSG00000039795.15_10406141_10411271_1	chr3	-	381	4	ISM	ENSMUSG00000039795.15	ENSMUST00000108377.8	936	8	5102	462	2343	-367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	825	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCGGTGGAGCATCGG	NA	NA	NA	NA	NA	NA	NA	NA	10411271	10406140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_10406206_10409860_10409983_10410994_10411087_10411169
ENSMUSG00000039795.15_10406151_10411271_1	chr3	-	371	4	ISM	ENSMUSG00000039795.15	ENSMUST00000108377.8	936	8	5102	472	2343	-377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTCTTTTGCCTGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	10411271	10406150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_10406206_10409860_10409983_10410994_10411087_10411169
ENSMUSG00000039798.3_29758735_29759834_1	chr2	-	911	2	FSM	ENSMUSG00000039798.3	ENSMUST00000047607.3	1406	2	495	0	495	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGACCTAAGCAACATCAT	NA	NA	NA	NA	NA	NA	NA	NA	29759834	29758734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_29759383_29759571
ENSMUSG00000039813.15_46605727_46607046_1	chr4	-	408	3	ISM	ENSMUSG00000039813.15	ENST00000375066.6	2686	13	42895	9	42895	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGCAGGAAGATAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	46607046	46605726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_46605969_46606382_46606472_46606969
ENSMUSG00000039813.15_46605808_46607115_1	chr4	-	396	3	ISM	ENSMUSG00000039813.15	ENST00000375066.6	2686	13	42826	90	42826	-90	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAGAGGGCTGCGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	46607115	46605807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_46605969_46606382_46606472_46606969
ENSMUSG00000039813.15_46607074_46614149_1	chr4	-	405	3	ISM	ENSMUSG00000039813.15	ENST00000375066.6	2686	13	35792	1356	35792	-1356	internal_fragment	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCTCATCACTTTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	46614149	46607073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_46607156_46608982_46609104_46613947
ENSMUSG00000039824.5_128330459_128332266_1	chr10	-	298	3	ISM	ENSMUSG00000039824.5	ENST00000552568.5	543	5	1021	0	1021	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGGGCAGGATGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	128332266	128330458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128330537_128331021_128331097_128332121
ENSMUSG00000039828.8_7902543_7951634_1	chr15	-	877	7	ISM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	177041	0	177041	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGATTTTGTCCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	7951634	7902542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549
ENSMUSG00000039828.8_7902714_7953788_1	chr15	-	806	8	ISM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	174887	171	174887	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAAGTGGAGTCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	7953788	7902713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688
ENSMUSG00000039828.8_7913821_8006545_1	chr15	-	823	8	ISM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	122130	11278	122130	-11278	internal_fragment	TRUE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCGCCATGCCAAAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	8006545	7913820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448
ENSMUSG00000039828.8_7915134_8065276_1	chr15	-	849	9	ISM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	63399	12591	63399	-12591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGCCAGCGAAGTACGAGG	NA	NA	NA	NA	NA	NA	NA	NA	8065276	7915133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211
ENSMUSG00000039828.8_7949968_8072330_1	chr15	-	869	7	ISM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	56345	47425	56345	-47425	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTAGCTTCTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	8072330	7949967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191
ENSMUSG00000039828.8_7950080_8075972_1	chr15	-	812	8	ISM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	52703	47537	52703	-47537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACTCATAGTTACCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	8075972	7950079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912
ENSMUSG00000039828.8_7951577_8108707_1	chr15	-	822	8	ISM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	19968	49034	19968	-49034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGACCTTCCTACCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	8108707	7951576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643
ENSMUSG00000039828.8_7953688_8108848_1	chr15	-	906	7	ISM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	19827	51145	19827	-51145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAACCAGCTCTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	8108848	7953687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643
ENSMUSG00000039828.8_8006509_8112006_1	chr15	-	806	7	ISM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	16669	103966	16669	-103966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTGTGGCCGCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	8112006	8006508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108849_8111945
ENSMUSG00000039828.8_8065211_8128675_1	chr15	-	898	8	ISM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	0	162668	0	56500	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATGGACGGTGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	8128675	8065210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_8065366_8072191_8072326_8075912_8075973_8108643_8108849_8111945_8112067_8123159_8123244_8128439_8128506_8128602
ENSMUSG00000039828.8_8122123_8128675_1	chr15	-	700	4	FSM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	18	412	0	-412	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATCTGACCCAAATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	8128675	8122122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602
ENSMUSG00000039835.17_18400520_18407506_1	chr10	+	2895	3	ISM	ENSMUSG00000039835.17	ENSMUST00000100054.4	6795	8	54791	2131	54791	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGGGAGAGGGAGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	18400519	18407506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_18402791_18403283_18403417_18407015
ENSMUSG00000039842.16_18681981_18852607_1	chr8	+	2483	7	ISM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	36834	598	36383	-598	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTCAGGAAGCCTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	18681980	18852607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ENSMUSG00000039849.7_164726275_164727667_1	chr2	+	285	3	ISM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	4998	8707	4998	-8707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGGGGTTCATCCAC	NA	NA	NA	NA	NA	NA	NA	NA	164726274	164727667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164726350_164727278_164727417_164727595
ENSMUSG00000039849.7_164730344_164731347_1	chr2	+	305	3	ISM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	9067	5027	9067	-5027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGTTCCTGCCTCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	164730343	164731347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164730434_164731013_164731187_164731305
ENSMUSG00000039849.7_164731137_164731620_1	chr2	+	284	3	ISM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	9860	4754	9860	-4754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCTGACACAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	164731136	164731620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164731187_164731305_164731393_164731473
ENSMUSG00000039849.7_164731541_164732621_1	chr2	+	315	3	ISM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	10264	3753	10264	-3753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACGCCACCAGCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	164731540	164732621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164731659_164732334_164732429_164732518
ENSMUSG00000039850.17_119382611_119391529_1	chr11	+	285	2	ISM	ENSMUSG00000039850.17	ENST00000520284.5	484	4	1	2124	1	-2124	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAAGGGCTTTGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	119382610	119391529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119382783_119391416
ENSMUSG00000039850.17_119382611_119393653_1	chr11	+	523	5	FSM	ENSMUSG00000039850.17	ENST00000323854.9	525	5	1	1	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGGGCTGTGGTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	119382610	119393653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_119382783_119390671_119390712_119391416_119391530_119393118_119393188_119393524
ENSMUSG00000039850.17_119382717_119393187_1	chr11	+	248	3	ISM	ENSMUSG00000039850.17	ENST00000520284.5	484	4	107	466	107	-466	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGCCAGAAAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	119382716	119393187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_119382783_119391416_119391530_119393118
ENSMUSG00000039851.12_90852283_90866033_1	chr16	-	1081	2	FSM	ENSMUSG00000039851.12	ENST00000479548.2	1086	2	5	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTTCAATGCCAAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	90866033	90852282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_90853246_90865915
ENSMUSG00000039851.12_90852283_90866033_2	chr16	-	1077	2	NIC	ENSMUSG00000039851.12	novel	1086	2	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTTCAATGCCAAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	90866033	90852282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr16_-_90853246_90865919
ENSMUSG00000039865.9_121254817_121307373_1	chr3	-	1189	9	ISM	ENSMUSG00000039865.9	ENST00000446120.6	1736	13	18463	53	18463	-53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTGGACCTGGAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	121307373	121254816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_121254988_121257062_121257201_121279910_121279998_121283846_121284004_121291367_121291534_121303022_121303210_121303840_121303966_121305970_121306061_121307305
ENSMUSG00000039865.9_121254926_121318529_1	chr3	-	1227	10	ISM	ENSMUSG00000039865.9	ENST00000446120.6	1736	13	7307	162	7307	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTGTGGGCCATCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	121318529	121254925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_121254988_121257062_121257201_121279910_121279998_121283846_121284004_121291367_121291534_121303022_121303210_121303840_121303966_121305970_121306061_121307305_121307467_121318475
ENSMUSG00000039865.9_121257147_121319353_1	chr3	-	1159	10	ISM	ENSMUSG00000039865.9	ENST00000446120.6	1736	13	6483	2383	6483	-2383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCGCACACAATCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	121319353	121257146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_121257201_121279910_121279998_121283846_121284004_121291367_121291534_121303022_121303210_121303840_121303966_121305970_121306061_121307305_121307467_121318475_121318570_121319315
ENSMUSG00000039865.9_121283847_121320855_1	chr3	-	1260	9	ISM	ENSMUSG00000039865.9	ENST00000446120.6	1736	13	4981	29083	4981	-29083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACAGCCCCCTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	121320855	121283846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_121284004_121291367_121291534_121303022_121303210_121303840_121303966_121305970_121306061_121307305_121307467_121318475_121318570_121319315_121319453_121320712
ENSMUSG00000039883.6_21748557_21779987_1	chr5	+	1243	4	FSM	ENSMUSG00000039883.6	ENSMUST00000035651.6	2154	4	-4	915	-4	-915	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGCTCGACTTATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	21748556	21779987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_21748718_21765397_21766298_21775217_21775374_21779961
ENSMUSG00000039883.6_21748557_21780041_1	chr5	+	1297	4	FSM	ENSMUSG00000039883.6	ENSMUST00000035651.6	2154	4	-4	861	-4	-861	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATTTGTACTTTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	21748556	21780041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_21748718_21765397_21766298_21775217_21775374_21779961
ENSMUSG00000039883.6_21748661_21780100_1	chr5	+	1252	4	FSM	ENSMUSG00000039883.6	ENSMUST00000035651.6	2154	4	100	802	100	-802	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATCCACTACCTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	21748660	21780100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_21748718_21765397_21766298_21775217_21775374_21779961
ENSMUSG00000039883.6_21765396_21780204_1	chr5	+	1301	3	ISM	ENSMUSG00000039883.6	ENSMUST00000035651.6	2154	4	16835	698	16835	-698	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACGTACGGAGTTACTAT	NA	NA	NA	NA	NA	NA	NA	NA	21765395	21780204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21766298_21775217_21775374_21779961
ENSMUSG00000039883.6_21766005_21780738_1	chr5	+	1218	3	NNC	ENSMUSG00000039883.6	novel	2154	4	NA	NA	17444	-164	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGGAGGACCGTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	21766004	21780738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_21766298_21775225_21775374_21779961
ENSMUSG00000039883.6_21766166_21780909_1	chr5	+	1236	3	ISM	ENSMUSG00000039883.6	ENSMUST00000035651.6	2154	4	17605	-7	17605	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGTTCATTTTTACATAT	NA	NA	NA	NA	NA	NA	NA	NA	21766165	21780909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21766298_21775217_21775374_21779961
ENSMUSG00000039886.9_135764339_135773302_1	chr5	-	1551	12	NNC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGGACTGTGGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	135773302	135764338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772909
ENSMUSG00000039886.9_135764339_135773302_2	chr5	-	1554	12	NNC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGGACTGTGGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	135773302	135764338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765352_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
ENSMUSG00000039886.9_135764339_135773302_3	chr5	-	1553	12	NNC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGGACTGTGGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	135773302	135764338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770931_135771134_135771254_135772901
ENSMUSG00000039886.9_135764339_135773302_4	chr5	-	1552	12	NNC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1024	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGGACTGTGGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	135773302	135764338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_135764660_135764757_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
ENSMUSG00000039886.9_135764392_135773062_1	chr5	-	1440	10	FSM	ENSMUSG00000039886.9	ENST00000417509.5	1352	10	-79	-9	-79	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCAGGATTCGGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	135773062	135764391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
ENSMUSG00000039887.12_121085476_121155601_1	chr3	+	841	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	54	1142	0	245	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTAGCTATGTCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	121085475	121155601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
ENSMUSG00000039887.12_121092252_121155735_1	chr3	+	819	3	ISM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	6830	1008	6776	379	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGTAGGGATAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	121092251	121155735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_121092408_121113728_121113861_121155204
ENSMUSG00000039887.12_121092276_121155843_1	chr3	+	903	3	ISM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	6854	900	6800	487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAAGGTGAGAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	121092275	121155843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_121092408_121113728_121113861_121155204
ENSMUSG00000039887.12_121092339_121155888_1	chr3	+	885	3	ISM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	6917	855	6863	532	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGGGTTTTAGTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	121092338	121155888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_121092408_121113728_121113861_121155204
ENSMUSG00000039887.12_121113770_121155995_1	chr3	+	882	2	ISM	ENSMUSG00000039887.12	ENSMUST00000199554.2	441	3	28294	-639	28294	639	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCTCCATTATAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	121113769	121155995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_121113861_121155204
ENSMUSG00000039887.12_121113834_121156048_1	chr3	+	871	2	ISM	ENSMUSG00000039887.12	ENSMUST00000199554.2	441	3	28358	-692	28358	692	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGTGATCCCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	121113833	121156048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_121113861_121155204
ENSMUSG00000039903.19_90628001_90701773_1	chr16	+	1567	6	FSM	ENSMUSG00000039903.19	ENSMUST00000231280.2	1692	6	125	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTAAGTTCACTCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	90628000	90701773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_90628321_90672926_90673080_90687417_90687562_90691465_90691544_90694251_90694342_90700991
ENSMUSG00000039903.19_90663184_90691547_1	chr16	+	230	2	NNC	ENSMUSG00000039903.19	novel	278	2	NA	NA	41	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATGGCTTACCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	90663183	90691547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_90663340_90691473
ENSMUSG00000039903.19_90663184_90691547_2	chr16	+	391	3	FSM	ENSMUSG00000039903.19	ENST00000514073.1	442	3	52	-1	41	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATGGCTTACCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	90663183	90691547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_90663340_90672926_90673080_90691465
ENSMUSG00000039903.19_90663184_90691547_3	chr16	+	238	2	FSM	ENSMUSG00000039903.19	ENST00000493276.1	278	2	41	-1	41	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATGGCTTACCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	90663183	90691547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_90663340_90691465
ENSMUSG00000039910.11_17598990_17601130_1	chr10	+	1663	2	FSM	ENSMUSG00000039910.11	ENSMUST00000038107.9	1979	2	24	292	9	-261	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGGCTGTCTCCCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	17598989	17601130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_17599208_17599685
ENSMUSG00000039910.11_17599110_17601180_1	chr10	+	1593	2	FSM	ENSMUSG00000039910.11	ENSMUST00000038107.9	1979	2	144	242	129	-211	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCGTCAGTGGCAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	17599109	17601180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_17599208_17599685
ENSMUSG00000039910.11_17599155_17601237_1	chr10	+	1605	2	FSM	ENSMUSG00000039910.11	ENSMUST00000038107.9	1979	2	189	185	-103	-154	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACACTGTGCTAATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	17599154	17601237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_17599208_17599685
ENSMUSG00000039910.11_17599289_17601404_1	chr10	+	1787	2	FSM	ENSMUSG00000039910.11	ENST00000536159.2	1817	2	31	-1	31	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTCTAAAAGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	17599288	17601404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_17599357_17599685
ENSMUSG00000039910.11_17599289_17601404_2	chr10	+	1779	2	NNC	ENSMUSG00000039910.11	novel	1817	2	NA	NA	31	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTCTAAAAGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	17599288	17601404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_17599352_17599688
ENSMUSG00000039911.14_149982424_149991106_1	chr4	-	609	2	FSM	ENSMUSG00000039911.14	ENSMUST00000105684.2	1002	2	640	-247	640	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCAGGCGCCTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	149991106	149982423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_149982799_149990872
ENSMUSG00000039911.14_149982671_149991360_1	chr4	-	616	2	FSM	ENSMUSG00000039911.14	ENSMUST00000105684.2	1002	2	386	0	386	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATCCCAGGACCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	149991360	149982670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_149982799_149990872
ENSMUSG00000039911.14_149991206_150039373_1	chr4	-	573	2	ISM	ENSMUSG00000039911.14	ENSMUST00000038562.9	3092	3	127	10466	127	-8535	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCCTTTGCACTCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	150039373	149991205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149991715_150039309
ENSMUSG00000039917.11_135661472_135675230_1	chr5	+	4202	4	NNC	ENSMUSG00000039917.11	novel	4207	4	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGCTCAGTGAATAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	135661471	135675230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_135661773_135664848_135665252_135667943_135668095_135671883
ENSMUSG00000039917.11_135661577_135675230_2	chr5	+	4097	4	NNC	ENSMUSG00000039917.11	novel	4207	4	NA	NA	105	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGCTCAGTGAATAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	135661576	135675230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_135661773_135664848_135665252_135667943_135668095_135671883
ENSMUSG00000039934.13_21483073_21492747_1	chr5	+	234	3	ISM	ENSMUSG00000039934.13	ENST00000441833.6	670	7	31	2882	31	-2882	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGTGCTGCTGCTTACTG	NA	NA	NA	NA	NA	NA	NA	NA	21483072	21492747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21483139_21486505_21486601_21492674
ENSMUSG00000039934.13_21486505_21493647_1	chr5	+	278	3	ISM	ENSMUSG00000039934.13	ENST00000441833.6	670	7	3463	1982	3463	-1982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCCTGAAATTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	21486504	21493647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21486601_21492674_21492795_21493585
ENSMUSG00000039934.13_21486558_21494815_1	chr5	+	254	4	ISM	ENSMUSG00000039934.13	ENST00000441833.6	670	7	3516	814	3516	-814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCACCCCATGAGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	21486557	21494815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21486601_21492674_21492795_21493585_21493648_21494786
ENSMUSG00000039934.13_21492674_21494888_1	chr5	+	285	3	ISM	ENSMUSG00000039934.13	ENST00000441833.6	670	7	9632	741	9632	-741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCGAGTAAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	21492673	21494888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21492795_21493585_21493648_21494786
ENSMUSG00000039934.13_21492747_21495077_1	chr5	+	247	4	ISM	ENSMUSG00000039934.13	ENST00000441833.6	670	7	9705	552	9705	-552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGAATTTCTGCCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	21492746	21495077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21492795_21493585_21493648_21494786_21494889_21495042
ENSMUSG00000039934.13_21494787_21495629_1	chr5	+	296	3	ISM	ENSMUSG00000039934.13	ENST00000441833.6	670	7	11745	0	11745	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGACGTGCAGACGGACGA	NA	NA	NA	NA	NA	NA	NA	NA	21494786	21495629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21494889_21495042_21495143_21495535
ENSMUSG00000039943.17_135749444_135809015_1	chr2	+	1609	18	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	30141	46375	30141	-45973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCGTACTTGTCCACGA	NA	NA	NA	NA	NA	NA	NA	NA	135749443	135809015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135806971_135807008_135808944
ENSMUSG00000039943.17_135752019_135809921_1	chr2	+	1651	17	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	32716	45469	32716	-45067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCTAACGGACTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	135752018	135809921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135806971_135807008_135808944_135809087_135809836
ENSMUSG00000039943.17_135771873_135810365_1	chr2	+	1632	17	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	52570	45025	52570	-44623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCGCTAATGTCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	135771872	135810365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135806971_135807008_135808944_135809087_135809836_135809922_135810240
ENSMUSG00000039943.17_135780178_135813780_1	chr2	+	1653	17	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	60875	41610	60875	-41208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCCCCTGCTCACCACA	NA	NA	NA	NA	NA	NA	NA	NA	135780177	135813780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135806971_135807008_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677
ENSMUSG00000039943.17_135781206_135814961_1	chr2	+	1623	17	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	61903	40429	61903	-40027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGTATAATGAAGAATCG	NA	NA	NA	NA	NA	NA	NA	NA	135781205	135814961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135806971_135807008_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831
ENSMUSG00000039943.17_135789009_135818084_1	chr2	+	1598	16	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	69706	37306	69706	-36904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGATCCTTCCTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	135789008	135818084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135806971_135807008_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018
ENSMUSG00000039943.17_135792275_135855022_1	chr2	+	2636	26	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	72972	368	72972	34	internal_fragment	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGACTCCACAGACAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	135792274	135855022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135806971_135807008_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135854885
ENSMUSG00000039943.17_135808997_135844553_1	chr2	+	1624	15	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	89694	10837	89694	-10435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCAAGAACAAGGCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	135808996	135844553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478
ENSMUSG00000039943.17_135809835_135849317_1	chr2	+	1621	15	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	90532	6073	90532	-5671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATCCCATGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	135809834	135849317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259
ENSMUSG00000039943.17_135810328_135854988_1	chr2	+	1674	17	ISM	ENSMUSG00000039943.17	ENST00000378473.9	5243	38	91025	1675	91025	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACACCAGAAGATCATGC	NA	NA	NA	NA	NA	NA	NA	NA	135810327	135854988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ENSMUSG00000039943.17_135814863_135855189_1	chr2	+	1651	14	ISM	ENSMUSG00000039943.17	ENST00000378473.9	5243	38	95560	1474	95560	201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACACACACACACACAG	NA	NA	NA	NA	NA	NA	NA	NA	135814862	135855189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ENSMUSG00000039943.17_135814967_135855330_1	chr2	+	1606	15	ISM	ENSMUSG00000039943.17	ENST00000378473.9	5243	38	95664	1333	95664	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGGGCTTGGTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	135814966	135855330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885_135855172_135855253
ENSMUSG00000039943.17_135823951_135855565_1	chr2	+	1608	13	ISM	ENSMUSG00000039943.17	ENST00000378473.9	5243	38	104648	1098	104648	175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTACCATGCCATAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	135823950	135855565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885_135855172_135855253
ENSMUSG00000039943.17_135824949_135855740_1	chr2	+	1639	12	ISM	ENSMUSG00000039943.17	ENST00000378473.9	5243	38	105646	923	105646	350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCACATATTGCAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	135824948	135855740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885_135855172_135855253
ENSMUSG00000039943.17_135829796_135855877_1	chr2	+	1589	10	ISM	ENSMUSG00000039943.17	ENST00000378473.9	5243	38	110493	786	110493	487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACACGACAAGACTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	135829795	135855877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885_135855172_135855253
ENSMUSG00000039943.17_135836293_135856006_1	chr2	+	1612	9	ISM	ENSMUSG00000039943.17	ENST00000378473.9	5243	38	116990	657	116990	-507	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGCACAGAATATTATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	135836292	135856006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885_135855172_135855253
ENSMUSG00000039943.17_135842150_135856196_1	chr2	+	1593	7	ISM	ENSMUSG00000039943.17	ENST00000378473.9	5243	38	122847	467	122847	-317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGTTAAATATCCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	135842149	135856196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885_135855172_135855253
ENSMUSG00000039943.17_135844514_135856316_1	chr2	+	1598	6	ISM	ENSMUSG00000039943.17	ENST00000378473.9	5243	38	125211	347	125211	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGAGGAGCATGCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	135844513	135856316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885_135855172_135855253
ENSMUSG00000039943.17_135849743_135856513_1	chr2	+	1670	4	ISM	ENSMUSG00000039943.17	ENST00000378473.9	5243	38	130440	150	130440	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACATCTACCAGAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	135849742	135856513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135849830_135852855_135852893_135854885_135855172_135855253
ENSMUSG00000039943.17_135854966_135856655_1	chr2	+	1608	2	ISM	ENSMUSG00000039943.17	ENST00000278655.8	5170	36	135663	8	135663	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTCTACATACAGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	135854965	135856655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135855172_135855253
ENSMUSG00000039943.17_135855068_135856663_1	chr2	+	1514	2	ISM	ENSMUSG00000039943.17	ENST00000278655.8	5170	36	135765	0	135765	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACAGAAGTCATGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	135855067	135856663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135855172_135855253
ENSMUSG00000039952.16_108084110_108140908_1	chr9	-	3435	4	FSM	ENSMUSG00000039952.16	ENSMUST00000171412.7	4415	4	27	953	27	-953	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCCCAGCTCTCTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	108140908	108084109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140679
ENSMUSG00000039952.16_108084972_108140736_1	chr9	-	2344	3	FSM	ENSMUSG00000039952.16	ENST00000539901.5	5636	3	385	2907	199	-1815	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGAAGCTCAGCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	108140736	108084971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_108086861_108095211_108095610_108140679
ENSMUSG00000039952.16_108085023_108140789_1	chr9	-	2346	3	FSM	ENSMUSG00000039952.16	ENST00000539901.5	5636	3	332	2958	146	-1866	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTCTGGCAGTTGTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	108140789	108085022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_108086861_108095211_108095610_108140679
ENSMUSG00000039952.16_108085080_108140908_1	chr9	-	2408	3	FSM	ENSMUSG00000039952.16	ENST00000539901.5	5636	3	213	3015	27	-1923	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCTTCTCCAATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	108140908	108085079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_108086861_108095211_108095610_108140679
ENSMUSG00000039953.14_149713814_149731981_1	chr4	+	2406	15	ISM	ENSMUSG00000039953.14	ENSMUST00000039144.7	3319	19	42719	375	42719	-375	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGACAGCTGGAATGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	149713813	149731981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ENSMUSG00000039953.14_149713906_149732083_1	chr4	+	2416	15	ISM	ENSMUSG00000039953.14	ENSMUST00000039144.7	3319	19	42811	273	42811	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTTGACCAGCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	149713905	149732083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ENSMUSG00000039953.14_149719205_149732566_1	chr4	+	2423	12	ISM	ENSMUSG00000039953.14	ENSMUST00000039144.7	3319	19	48110	-210	48110	210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCTCTTCCTCCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	149719204	149732566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ENSMUSG00000039953.14_149722726_149732876_1	chr4	+	2403	10	ISM	ENSMUSG00000039953.14	ENSMUST00000039144.7	3319	19	51631	-520	51631	-480	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTCCTCGCTTGGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	149722725	149732876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ENSMUSG00000039953.14_149727716_149733135_1	chr4	+	2414	8	ISM	ENSMUSG00000039953.14	ENSMUST00000105691.8	4459	18	56791	221	56621	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCCTCGCTGCTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	149727715	149733135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ENSMUSG00000039958.18_149043136_149052669_1	chr6	+	1437	4	FSM	ENSMUSG00000039958.18	ENSMUST00000047531.16	1562	4	125	0	-8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAACTCAAGTGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	149043135	149052669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_149043203_149045531_149045941_149048655_149048787_149051839
ENSMUSG00000039958.18_149045795_149051896_2	chr6	+	203	2	FSM	ENSMUSG00000039958.18	ENST00000538391.1	740	2	151	386	151	-386	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAACTAAAAACATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	149045794	149051896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_149045941_149051839
ENSMUSG00000039958.18_149045795_149051954_1	chr6	+	255	2	NNC	ENSMUSG00000039958.18	novel	740	2	NA	NA	151	-328	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATGTTTTATGATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	149045794	149051954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_149045941_149051845
ENSMUSG00000039958.18_149045885_149051954_1	chr6	+	171	2	FSM	ENSMUSG00000039958.18	ENST00000538391.1	740	2	241	328	241	-328	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATGTTTTATGATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	149045884	149051954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_149045941_149051839
ENSMUSG00000039959.14_135440026_135473644_1	chr5	-	2412	23	NIC	ENSMUSG00000039959.14	novel	3045	30	NA	NA	15682	0	combination_of_known_junctions	TRUE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGACACTCGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	135473644	135440025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588
ENSMUSG00000039959.14_135441464_135478679_1	chr5	-	2459	23	NIC	ENSMUSG00000039959.14	novel	3045	30	NA	NA	10647	-1438	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCCCCTTGGGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	135478679	135441463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_-_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537
ENSMUSG00000039959.14_135443102_135480489_1	chr5	-	2412	23	NIC	ENSMUSG00000039959.14	novel	3045	30	NA	NA	8837	-3076	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACACCATTGCTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	135480489	135443101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_-_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427
ENSMUSG00000039959.14_135445824_135484000_1	chr5	-	2507	24	NIC	ENSMUSG00000039959.14	novel	3045	30	NA	NA	5326	-5798	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCTTTTGCACTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	135484000	135445823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_-_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918
ENSMUSG00000039959.14_135449076_135485949_1	chr5	-	2441	24	NIC	ENSMUSG00000039959.14	novel	3045	30	NA	NA	3377	-9050	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCCGGCCGGCTGGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	135485949	135449075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_-_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892
ENSMUSG00000039959.14_135450974_135487096_1	chr5	-	2477	24	NIC	ENSMUSG00000039959.14	novel	3045	30	NA	NA	2230	-10948	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGACTGGCTCCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	135487096	135450973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_-_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953
ENSMUSG00000039976.5_119038390_119039906_1	chr11	-	403	2	ISM	ENSMUSG00000039976.5	ENST00000576768.5	1156	7	7713	-4	7713	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTGCCCTTGACCATCG	NA	NA	NA	NA	NA	NA	NA	NA	119039906	119038389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119038643_119039756
ENSMUSG00000039976.5_119038506_119044736_1	chr11	-	486	4	ISM	ENSMUSG00000039976.5	ENST00000576768.5	1156	7	2883	112	2883	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAGAGCTGTCCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	119044736	119038505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119038643_119039756_119039904_119041853_119042034_119044714
ENSMUSG00000039976.5_119038577_119044791_1	chr11	-	470	4	ISM	ENSMUSG00000039976.5	ENST00000576768.5	1156	7	2828	183	2828	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTGTGGGACAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	119044791	119038576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119038643_119039756_119039904_119041853_119042034_119044714
ENSMUSG00000039976.5_119038621_119044848_1	chr11	-	483	4	ISM	ENSMUSG00000039976.5	ENST00000576768.5	1156	7	2771	227	2771	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGCCTTCTACCACGGATA	NA	NA	NA	NA	NA	NA	NA	NA	119044848	119038620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119038643_119039756_119039904_119041853_119042034_119044714
ENSMUSG00000039976.5_119039848_119045952_1	chr11	-	468	4	ISM	ENSMUSG00000039976.5	ENST00000576768.5	1156	7	1667	1454	1667	-1454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATCGAGCAGCAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	119045952	119039847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119039904_119041853_119042034_119044714_119044902_119045907
ENSMUSG00000039976.5_119039884_119046036_1	chr11	-	516	4	ISM	ENSMUSG00000039976.5	ENST00000576768.5	1156	7	1583	1490	1583	-1490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGTGGCCATCGTCG	NA	NA	NA	NA	NA	NA	NA	NA	119046036	119039883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119039904_119041853_119042034_119044714_119044902_119045907
ENSMUSG00000039976.5_119041995_119047499_1	chr11	-	499	5	ISM	ENSMUSG00000039976.5	ENST00000576768.5	1156	7	120	3601	120	-3601	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACCAACACCTGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	119047499	119041994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119042034_119044714_119044902_119045907_119046043_119046845_119046953_119047468
ENSMUSG00000039976.5_119044760_119047544_1	chr11	-	460	4	ISM	ENSMUSG00000039976.5	ENST00000576768.5	1156	7	75	6366	75	-6366	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTGTCAGCTCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	119047544	119044759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119044902_119045907_119046043_119046845_119046953_119047468
ENSMUSG00000039976.5_119044809_119047597_1	chr11	-	464	4	ISM	ENSMUSG00000039976.5	ENST00000576768.5	1156	7	22	6415	22	-6415	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGAATCAGACACCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	119047597	119044808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119044902_119045907_119046043_119046845_119046953_119047468
ENSMUSG00000039977.17_15523278_15538027_1	chr9	-	255	2	FSM	ENSMUSG00000039977.17	ENST00000527307.2	244	2	-11	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGCACACATGTCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	15538027	15523277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_15523451_15537945
ENSMUSG00000039983.14_118830164_118857742_1	chr2	-	407	3	FSM	ENSMUSG00000039983.14	ENST00000558113.5	532	3	125	0	125	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGACGGGCCAGGCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	118857742	118830163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_118830290_118852549_118852707_118857618
ENSMUSG00000039983.14_118830164_118857742_2	chr2	-	402	3	NNC	ENSMUSG00000039983.14	novel	532	3	NA	NA	125	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGACGGGCCAGGCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	118857742	118830163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_118830290_118852549_118852702_118857618
ENSMUSG00000039983.14_118848260_118852656_1	chr2	-	1493	2	ISM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	7218	0	5211	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAAAGATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	118852656	118848259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_118849646_118852549
ENSMUSG00000039983.14_118848396_118857691_1	chr2	-	1480	3	ISM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	2183	136	176	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCCTGAGTTCAATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	118857691	118848395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_118849646_118852549_118852707_118857618
ENSMUSG00000039983.14_118848464_118857724_1	chr2	-	1445	3	ISM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	2150	204	143	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGTCTCAAAAAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	118857724	118848463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_118849646_118852549_118852707_118857618
ENSMUSG00000039983.14_118848639_118859861_1	chr2	-	1478	4	FSM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	13	379	-3	-379	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTAGTGTGTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	118859861	118848638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_118849646_118852549_118852707_118857618_118857869_118859797
ENSMUSG00000039983.14_118852550_118857804_1	chr2	-	341	2	NNC	ENSMUSG00000039983.14	novel	532	3	NA	NA	63	-264	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACTGACGGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	118857804	118852549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_118852705_118857618
ENSMUSG00000039985.15_148822797_148827661_1	chr6	-	1883	2	ISM	ENSMUSG00000039985.15	ENSMUST00000203164.3	2442	5	6986	242	6986	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAATATACTTTGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	148827661	148822796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148824529_148827510
ENSMUSG00000039985.15_148822902_148830081_1	chr6	-	1853	3	ISM	ENSMUSG00000039985.15	ENSMUST00000204435.3	2785	7	14952	347	4566	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAACCCTGGTGTAATA	NA	NA	NA	NA	NA	NA	NA	NA	148830081	148822901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148824529_148827510_148827662_148830006
ENSMUSG00000039985.15_148823022_148832113_1	chr6	-	1850	4	ISM	ENSMUSG00000039985.15	ENSMUST00000204435.3	2785	7	12920	467	2534	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGAAGCCACAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	148832113	148823021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048
ENSMUSG00000039985.15_148823247_148847854_1	chr6	-	1872	6	FSM	ENSMUSG00000039985.15	ENSMUST00000054080.15	2697	6	111	714	111	-692	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAAGAAACTGAATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	148847854	148823246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847789
ENSMUSG00000039985.15_148823303_148847888_1	chr6	-	1850	6	FSM	ENSMUSG00000039985.15	ENSMUST00000054080.15	2697	6	77	770	77	-748	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGAGAAGAGTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	148847888	148823302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847789
ENSMUSG00000039985.15_148823353_148847941_1	chr6	-	1853	6	FSM	ENSMUSG00000039985.15	ENSMUST00000054080.15	2697	6	24	820	24	-798	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGGTTTTGTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	148847941	148823352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847789
ENSMUSG00000039985.15_148823543_148844916_1	chr6	-	1680	7	FSM	ENSMUSG00000039985.15	ENSMUST00000204435.3	2785	7	117	988	117	668	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATGCTGCTTGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	148844916	148823542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148839237_148839318_148844827
ENSMUSG00000039985.15_148823613_148845033_1	chr6	-	1727	7	FSM	ENSMUSG00000039985.15	ENSMUST00000204435.3	2785	7	0	1058	0	598	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGTAGAGAGCACGTGG	NA	NA	NA	NA	NA	NA	NA	NA	148845033	148823612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148839237_148839318_148844827
ENSMUSG00000039987.16_20964661_20969307_1	chr5	-	1635	3	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	90890	894	90890	-894	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAAAATAATTAATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	20969307	20964660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_20966074_20966661_20966788_20969211
ENSMUSG00000039987.16_20964877_20978725_1	chr5	-	1549	5	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	81472	1110	81472	-1110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATATGATAGTCCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	20978725	20964876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_20966074_20966661_20966788_20969211_20969308_20977172_20977260_20978682
ENSMUSG00000039987.16_20964940_20978768_1	chr5	-	1529	5	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	81429	1173	81429	-1173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTCAGTAACTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	20978768	20964939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_20966074_20966661_20966788_20969211_20969308_20977172_20977260_20978682
ENSMUSG00000039987.16_20965068_20979111_1	chr5	-	1558	6	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	81086	1301	81086	-1301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTCCAGAAGGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	20979111	20965067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_20966074_20966661_20966788_20969211_20969308_20977172_20977260_20978682_20978815_20979000
ENSMUSG00000039987.16_20965109_20979158_1	chr5	-	1564	6	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	81039	1342	81039	-1342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAGAATAAAGTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	20979158	20965108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_20966074_20966661_20966788_20969211_20969308_20977172_20977260_20978682_20978815_20979000
ENSMUSG00000039987.16_20965205_20979233_1	chr5	-	1543	6	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	80964	1438	80964	-1438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTGTTATTACTAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	20979233	20965204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_20966074_20966661_20966788_20969211_20969308_20977172_20977260_20978682_20978815_20979000
ENSMUSG00000039987.16_20965322_20980969_1	chr5	-	1559	7	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	79228	1555	79228	-1555	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTTTAAAATGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	20980969	20965321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_20966074_20966661_20966788_20969211_20969308_20977172_20977260_20978682_20978815_20979000_20979274_20980876
ENSMUSG00000039987.16_20965489_20987491_1	chr5	-	1649	8	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	72706	1722	72706	-1722	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACAGGTCAACAAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	20987491	20965488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_20966074_20966661_20966788_20969211_20969308_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270
ENSMUSG00000039987.16_20965630_20994666_1	chr5	-	1546	9	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	65531	1863	65531	-1863	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTTGTCTCAGCTAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	20994666	20965629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_20966074_20966661_20966788_20969211_20969308_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626
ENSMUSG00000039987.16_20965675_20994727_1	chr5	-	1562	9	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	65470	1908	65470	-1908	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTTGCCTTACTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	20994727	20965674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_20966074_20966661_20966788_20969211_20969308_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626
ENSMUSG00000039987.16_20965731_20994782_1	chr5	-	1561	9	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	65415	1964	65415	-1964	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGCAGATTGTGAAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	20994782	20965730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_20966074_20966661_20966788_20969211_20969308_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626
ENSMUSG00000039987.16_20965992_21006986_1	chr5	-	1574	11	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	53211	2225	53211	-2225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGCAGTGGGTGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	21006986	20965991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_20966074_20966661_20966788_20969211_20969308_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899
ENSMUSG00000039987.16_20966742_21008235_1	chr5	-	1543	11	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	51962	2975	51962	-2975	internal_fragment	TRUE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTATAACATCACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	21008235	20966741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_20966788_20969211_20969308_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182
ENSMUSG00000039987.16_20969211_21008350_1	chr5	-	1613	10	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	51847	5444	51847	-5444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACCTGTGGAGGGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	21008350	20969210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_20969308_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182
ENSMUSG00000039987.16_20977169_21010705_1	chr5	-	1571	10	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	49492	13402	49492	-13402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCGTGCTACGTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	21010705	20977168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652
ENSMUSG00000039988.15_157653103_157712474_1	chr3	+	2654	13	FSM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	52	1197	52	927	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTATTAATGATTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	157653102	157712474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ENSMUSG00000039988.15_157667913_157712753_1	chr3	+	2402	11	ISM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	14862	918	14862	-918	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCTAAATGTTTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	157667912	157712753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ENSMUSG00000039988.15_157667927_157712854_1	chr3	+	2489	11	ISM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	14876	817	14876	-817	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGACTTATTTAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	157667926	157712854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ENSMUSG00000039988.15_157667978_157712939_1	chr3	+	2523	11	ISM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	14927	732	14927	-732	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACACTGTAGCTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	157667977	157712939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ENSMUSG00000039988.15_157678635_157713065_1	chr3	+	2523	9	ISM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	25584	606	25584	-606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGAGCCATCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	157678634	157713065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ENSMUSG00000039988.15_157697360_157713284_1	chr3	+	2440	6	ISM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	44309	387	44309	-387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTTAGCTATTTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	157697359	157713284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ENSMUSG00000039988.15_157697360_157713388_1	chr3	+	2544	6	ISM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	44309	283	44309	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTTGCAGCTTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	157697359	157713388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ENSMUSG00000039988.15_157700317_157713499_1	chr3	+	2482	5	ISM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	47266	172	47266	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCACTGGATTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	157700316	157713499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ENSMUSG00000039988.15_157705292_157713671_1	chr3	+	2577	4	ISM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	52241	0	52241	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGTGCCTATTAATCC	NA	NA	NA	NA	NA	NA	NA	NA	157705291	157713671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157705374_157706710_157706810_157709345_157709447_157711376
ENSMUSG00000039989.8_118972778_118977047_1	chr11	-	779	5	NNC	ENSMUSG00000039989.8	novel	745	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGGAGCTGCAGCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	118977047	118972777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_118973128_118973342_118973394_118975388_118975455_118976582_118976622_118976774
ENSMUSG00000039989.8_118972778_118977047_2	chr11	-	784	5	FSM	ENSMUSG00000039989.8	ENST00000448310.1	745	5	-39	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGGAGCTGCAGCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	118977047	118972777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_118973128_118973342_118973394_118975388_118975455_118976582_118976627_118976774
ENSMUSG00000040006.14_7643711_7655126_1	chr10	-	1403	7	ISM	ENSMUSG00000040006.14	ENSMUST00000124838.2	1525	8	1529	-9	1529	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTATTTTTAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	7655126	7643710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_7644350_7646120_7646285_7649061_7649196_7649711_7649869_7650981_7651134_7653537_7653635_7655066
ENSMUSG00000040006.14_7643824_7656655_1	chr10	-	1421	8	FSM	ENSMUSG00000040006.14	ENSMUST00000124838.2	1525	8	0	104	0	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTGAAGTGTATCATGA	NA	NA	NA	NA	NA	NA	NA	NA	7656655	7643823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_7644350_7646120_7646285_7649061_7649196_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
ENSMUSG00000040006.14_7643893_7656655_1	chr10	-	1352	8	FSM	ENSMUSG00000040006.14	ENSMUST00000124838.2	1525	8	0	173	0	-173	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATTTATTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	7656655	7643892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_7644350_7646120_7646285_7649061_7649196_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
ENSMUSG00000040007.9_118730858_118746736_1	chr2	+	438	2	ISM	ENSMUSG00000040007.9	ENST00000561234.5	4534	7	179	8269	179	-8269	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCCTCCCTTAATGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	118730857	118746736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118730928_118746368
ENSMUSG00000040007.9_118747341_118749690_1	chr2	+	527	2	ISM	ENSMUSG00000040007.9	ENSMUST00000036578.7	4594	7	15407	5319	15407	-5315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGCCCTGTGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	118747340	118749690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118747791_118749613
ENSMUSG00000040007.9_118747419_118749766_1	chr2	+	525	2	ISM	ENSMUSG00000040007.9	ENSMUST00000036578.7	4594	7	15485	5243	15485	-5239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGTAGCCCGGGCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	118747418	118749766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118747791_118749613
ENSMUSG00000040007.9_118747498_118749848_1	chr2	+	528	2	ISM	ENSMUSG00000040007.9	ENSMUST00000036578.7	4594	7	15564	5161	15564	-5157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACGCTGTGAGGAGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	118747497	118749848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118747791_118749613
ENSMUSG00000040007.9_118747732_118750770_1	chr2	+	535	3	ISM	ENSMUSG00000040007.9	ENSMUST00000036578.7	4594	7	15798	4239	15798	-4235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCCAAGAAAGACGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	118747731	118750770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118747791_118749613_118749997_118750677
ENSMUSG00000040007.9_118749847_118752908_1	chr2	+	533	5	ISM	ENSMUSG00000040007.9	ENSMUST00000036578.7	4594	7	17913	2101	17913	-2097	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACAGCACTGGTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	118749846	118752908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118749997_118750677_118750838_118751236_118751314_118752076_118752178_118752863
ENSMUSG00000040007.9_118749907_118752961_1	chr2	+	526	5	ISM	ENSMUSG00000040007.9	ENSMUST00000036578.7	4594	7	17973	2048	17973	-2044	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCCGGAGGACACGGAC	NA	NA	NA	NA	NA	NA	NA	NA	118749906	118752961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118749997_118750677_118750838_118751236_118751314_118752076_118752178_118752863
ENSMUSG00000040010.11_122608152_122610392_1	chr8	-	1746	2	ISM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	24041	263	24041	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTTTATCCTAACATG	NA	NA	NA	NA	NA	NA	NA	NA	122610392	122608151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_122609835_122610329
ENSMUSG00000040010.11_122608402_122612668_1	chr8	-	1782	4	ISM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	21765	513	21765	-513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTGAAGGTTCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	122612668	122608401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647
ENSMUSG00000040010.11_122608651_122613636_1	chr8	-	1753	6	ISM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	20797	762	20797	-762	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGAGACAGTTGGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	122613636	122608650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596
ENSMUSG00000040010.11_122608938_122623241_1	chr8	-	1776	9	ISM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	11192	1049	11192	-1049	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCCCCACCTCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	122623241	122608937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166
ENSMUSG00000040010.11_122608991_122623259_1	chr8	-	1741	9	ISM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	11174	1102	11174	-1102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGCACACAATGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	122623259	122608990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166
ENSMUSG00000040010.11_122609119_122633888_1	chr8	-	1742	10	FSM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	545	1230	545	-1230	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGTCACTTGTTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	122633888	122609118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ENSMUSG00000040010.11_122609541_122634248_1	chr8	-	1680	10	FSM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	185	1652	185	-1652	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACCTGAGGCCTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	122634248	122609540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ENSMUSG00000040025.18_131913883_131938120_1	chr4	-	434	2	ISM	ENSMUSG00000040025.18	ENSMUST00000085181.5	955	4	1282	282	1282	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTCCGTAAGTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	131938120	131913882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131914259_131938062
ENSMUSG00000040025.18_131914061_131931666_1	chr4	-	422	2	ISM	ENSMUSG00000040025.18	ENST00000541996.5	2769	4	7765	686	7736	-460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGGAAAAAAAAAAGGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	131931666	131914060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131914259_131931442
ENSMUSG00000040025.18_131932268_131938120_1	chr4	-	817	2	ISM	ENSMUSG00000040025.18	ENST00000541996.5	2769	4	1311	18893	1282	-18667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCAACCCAGGGATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	131938120	131932267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131933027_131938062
ENSMUSG00000040025.18_131932400_131939295_1	chr4	-	817	4	ISM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	319	20177	107	-18799	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCAAGAATGGCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	131939295	131932399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131933027_131938062_131938143_131938742_131938768_131939210
ENSMUSG00000040025.18_131932532_131939433_1	chr4	-	823	4	ISM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	181	20309	-2	-18931	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGGTAGTGGGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	131939433	131932531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131933027_131938062_131938143_131938742_131938768_131939210
ENSMUSG00000040025.18_131932648_131939614_1	chr4	-	888	4	ISM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	0	20425	0	-19047	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCAATGAGACCCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	131939614	131932647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131933027_131938062_131938143_131938742_131938768_131939210
ENSMUSG00000040025.18_131932793_131939294_1	chr4	-	398	3	ISM	ENSMUSG00000040025.18	ENST00000541996.5	2769	4	137	19418	108	-19192	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTTCCCAGTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	131939294	131932792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131933027_131938062_131938143_131939210
ENSMUSG00000040025.18_131932930_131939416_1	chr4	-	383	3	ISM	ENSMUSG00000040025.18	ENST00000541996.5	2769	4	15	19555	-14	-19329	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGGTGACACAGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	131939416	131932929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_131933027_131938062_131938143_131939210
ENSMUSG00000040028.11_4339136_4345437_1	chr8	-	891	2	ISM	ENSMUSG00000040028.11	ENSMUST00000209010.2	2317	6	17182	793	17182	-793	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGATGGGGAGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	4345437	4339135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4339925_4345335
ENSMUSG00000040028.11_4339294_4351722_1	chr8	-	895	3	ISM	ENSMUSG00000040028.11	ENSMUST00000209010.2	2317	6	10897	951	10897	-951	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGTCACTCTGGACGGT	NA	NA	NA	NA	NA	NA	NA	NA	4351722	4339293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4339925_4345335_4345562_4351684
ENSMUSG00000040028.11_4339324_4351809_1	chr8	-	952	3	ISM	ENSMUSG00000040028.11	ENSMUST00000209010.2	2317	6	10810	981	10810	-981	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTGAAACCGAAGTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	4351809	4339323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4339925_4345335_4345562_4351684
ENSMUSG00000040028.11_4339429_4354960_1	chr8	-	910	4	ISM	ENSMUSG00000040028.11	ENSMUST00000209010.2	2317	6	7659	1086	7659	-1086	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTATACTCTGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	4354960	4339428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926
ENSMUSG00000040028.11_4339598_4361676_1	chr8	-	889	5	ISM	ENSMUSG00000040028.11	ENSMUST00000209010.2	2317	6	943	1255	943	-1255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCATGCTTTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	4361676	4339597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598
ENSMUSG00000040028.11_4339760_4374922_1	chr8	-	874	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	491	4378	491	-1417	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATTCGTGATTTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	4374922	4339759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ENSMUSG00000040028.11_4339808_4374978_1	chr8	-	882	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	435	4426	435	-1465	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTCTGGCAGATGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	4374978	4339807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ENSMUSG00000040028.11_4339851_4375086_1	chr8	-	947	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	327	4469	327	-1508	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCATCTTCATCTACAAC	NA	NA	NA	NA	NA	NA	NA	NA	4375086	4339850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ENSMUSG00000040028.11_4351683_4375250_1	chr8	-	813	4	ISM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	163	16301	163	-13340	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACAGGAGCTAAGATAG	NA	NA	NA	NA	NA	NA	NA	NA	4375250	4351682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4351839_4354926_4355031_4361598_4361787_4374885
ENSMUSG00000040028.11_4351683_4375413_1	chr8	-	976	4	ISM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	0	16301	0	-13340	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACAGGAGCTAAGATAG	NA	NA	NA	NA	NA	NA	NA	NA	4375413	4351682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_4351839_4354926_4355031_4361598_4361787_4374885
ENSMUSG00000040029.16_148672728_148673644_1	chr6	-	656	2	ISM	ENSMUSG00000040029.16	ENST00000256079.9	5096	26	59318	539	59318	-539	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGCTTAAATTTCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	148673644	148672727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148673047_148673307
ENSMUSG00000040029.16_148701297_148711434_1	chr6	-	670	7	ISM	ENSMUSG00000040029.16	ENST00000256079.9	5096	26	21528	29108	21528	-29108	internal_fragment	TRUE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACGAGGAGATGCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	148711434	148701296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377
ENSMUSG00000040034.16_7543304_7554645_1	chr10	+	960	6	NNC	ENSMUSG00000040034.16	novel	1286	8	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAATGTTGGCTTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	7543303	7554645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7552004_7552127_7554331
ENSMUSG00000040034.16_7543304_7554645_2	chr10	+	961	6	FSM	ENSMUSG00000040034.16	ENST00000367404.8	858	6	-15	-88	-15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAATGTTGGCTTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	7543303	7554645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7552003_7552127_7554331
ENSMUSG00000040034.16_7543304_7554645_3	chr10	+	1249	8	FSM	ENSMUSG00000040034.16	ENSMUST00000040135.9	1286	8	37	0	-15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAATGTTGGCTTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	7543303	7554645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
ENSMUSG00000040034.16_7543304_7554645_4	chr10	+	954	6	NNC	ENSMUSG00000040034.16	novel	1286	8	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAATGTTGGCTTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	7543303	7554645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7552003_7552127_7554338
ENSMUSG00000040043.18_127969193_127979303_1	chr10	-	692	9	ISM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	33045	217	33001	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTGGCTGATGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	127979303	127969192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263
ENSMUSG00000040043.18_127969508_127979421_1	chr10	-	768	8	ISM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	32927	532	32883	-457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTTTATGGTGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	127979421	127969507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263
ENSMUSG00000040043.18_127969996_127981633_1	chr10	-	774	8	ISM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	30715	1020	30671	-945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGCTTTTTCGGTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	127981633	127969995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541
ENSMUSG00000040043.18_127970866_127982529_1	chr10	-	751	8	ISM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	29819	1890	29775	-1815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGGATTGTCTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	127982529	127970865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470
ENSMUSG00000040043.18_127973378_127987140_1	chr10	-	694	8	ISM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	25208	4402	25164	-4327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGTATCTTCCATCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	127987140	127973377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051
ENSMUSG00000040044.12_34570931_34579836_1	chr4	-	690	7	ISM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	35108	135	35077	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGGGAGGCTGTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	34579836	34570930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742
ENSMUSG00000040044.12_34572511_34585643_1	chr4	-	667	7	ISM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	29301	1715	29270	-1715	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGGAGTGTAGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	34585643	34572510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572
ENSMUSG00000040044.12_34575086_34586499_1	chr4	-	653	7	ISM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	28445	4290	28414	-4290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCAAGAATCGCTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	34586499	34575085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443
ENSMUSG00000040044.12_34576352_34587082_1	chr4	-	707	7	ISM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	27862	5556	27831	-5556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTAATGCTTCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	34587082	34576351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948
ENSMUSG00000040044.12_34577973_34593140_1	chr4	-	669	7	ISM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	21804	7177	21773	-7177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTATCACCTTCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	34593140	34577972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060
ENSMUSG00000040044.12_34585573_34597441_1	chr4	-	723	6	ISM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	17472	14777	17472	-14777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAAAATGTCCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	34597441	34585572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307
ENSMUSG00000040044.12_34586946_34598756_1	chr4	-	694	5	ISM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	16157	16150	16157	-16150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAAGTATATTTAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	34598756	34586945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607
ENSMUSG00000040044.12_34593059_34605587_1	chr4	-	715	6	ISM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	9326	22263	9326	-22263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATCTGAAATTGATG	NA	NA	NA	NA	NA	NA	NA	NA	34605587	34593058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536
ENSMUSG00000040044.12_34595178_34607200_1	chr4	-	662	6	ISM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	7713	24382	7713	-24382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCACCGACTGCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	34607200	34595177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130
ENSMUSG00000040044.12_34597308_34614893_1	chr4	-	715	7	ISM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	20	26512	20	-26512	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTCGGCCGGCCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	34614893	34597307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ENSMUSG00000040048.15_24941034_24943452_1	chr17	-	727	4	NNC	ENSMUSG00000040048.15	novel	732	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2810	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTCTGGTGACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	24943452	24941033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_24941195_24941354_24941490_24941628_24941768_24943160
ENSMUSG00000040054.18_127927504_127946874_1	chr10	+	531	3	ISM	ENSMUSG00000040054.18	ENSMUST00000217851.2	8385	29	25	18297	0	-18293	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTTCATCCCCAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	127927503	127946874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127927646_127944762_127944901_127946623
ENSMUSG00000040054.18_127946717_127948535_1	chr10	+	496	3	ISM	ENSMUSG00000040054.18	ENST00000379441.7	8303	30	19253	16632	13986	-16632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGCTGTCTAGATGATC	NA	NA	NA	NA	NA	NA	NA	NA	127946716	127948535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127947013_127947102_127947218_127948450
ENSMUSG00000040054.18_127946757_127948619_1	chr10	+	540	3	ISM	ENSMUSG00000040054.18	ENST00000379441.7	8303	30	19293	16548	14026	-16548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTCTGGCAGCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	127946756	127948619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127947013_127947102_127947218_127948450
ENSMUSG00000040054.18_127946931_127949443_1	chr10	+	495	4	ISM	ENSMUSG00000040054.18	ENST00000379441.7	8303	30	19467	15724	14200	-15724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAATGCTAATGCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	127946930	127949443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127947013_127947102_127947218_127948450_127948637_127949331
ENSMUSG00000040054.18_127946959_127949528_1	chr10	+	552	4	ISM	ENSMUSG00000040054.18	ENST00000379441.7	8303	30	19495	15639	14228	-15639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGGGAGTCTGTCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	127946958	127949528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127947013_127947102_127947218_127948450_127948637_127949331
ENSMUSG00000040054.18_127947171_127950262_1	chr10	+	512	4	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	14440	14905	14440	-14905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAACTTCCAACGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	127947170	127950262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127947218_127948450_127948637_127949331_127949551_127950202
ENSMUSG00000040054.18_127955192_127957050_1	chr10	+	504	3	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	22461	8117	22461	-8117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTCATGGCATATA	NA	NA	NA	NA	NA	NA	NA	NA	127955191	127957050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127955370_127955492_127955748_127956979
ENSMUSG00000040054.18_127955577_127957757_1	chr10	+	550	4	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	22846	7410	22846	-7410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCATGGAGGAAACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	127955576	127957757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127955748_127956979_127957195_127957459_127957535_127957668
ENSMUSG00000040054.18_127955629_127957806_1	chr10	+	547	4	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	22898	7361	22898	-7361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAACAGCTGTCCATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	127955628	127957806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127955748_127956979_127957195_127957459_127957535_127957668
ENSMUSG00000040054.18_127957017_127958214_1	chr10	+	534	5	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	24286	6953	24286	-6953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTTCGGGCAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	127957016	127958214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174
ENSMUSG00000040054.18_127957087_127958263_1	chr10	+	513	5	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	24356	6904	24356	-6904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTATTACCGTATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	127957086	127958263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174
ENSMUSG00000040054.18_127957725_127959107_1	chr10	+	545	4	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	24994	6060	24994	-6060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGACTCAAGTTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	127957724	127959107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127957850_127957936_127957997_127958174_127958320_127958892
ENSMUSG00000040054.18_127959070_127959706_1	chr10	+	527	2	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	26339	5461	26339	-5461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAGAGGCTATCAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	127959069	127959706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127959525_127959634
ENSMUSG00000040054.18_127959414_127960263_1	chr10	+	550	4	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	26683	4904	26683	-4904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAGAGAAGACGTACGAG	NA	NA	NA	NA	NA	NA	NA	NA	127959413	127960263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127959525_127959634_127959858_127959975_127960132_127960203
ENSMUSG00000040054.18_127959766_127960909_1	chr10	+	548	4	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	27035	4258	27035	-4258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGATGCGATTGGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	127959765	127960909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127959858_127959975_127960132_127960203_127960356_127960761
ENSMUSG00000040054.18_127960094_127961202_1	chr10	+	545	4	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	27363	3965	27363	-3965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTGTGCTTGTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	127960093	127961202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127960132_127960203_127960356_127960761_127961052_127961137
ENSMUSG00000040054.18_127960914_127962039_1	chr10	+	571	4	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	28183	3128	28183	-3128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGGCTGTCTCCCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	127960913	127962039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127961052_127961137_127961271_127961367_127961515_127961886
ENSMUSG00000040054.18_127961422_127962520_1	chr10	+	525	4	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	28691	2647	28691	-2647	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGATGACTCTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	127961421	127962520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127961515_127961886_127962111_127962194_127962339_127962456
ENSMUSG00000040084.10_118428864_118456555_1	chr2	+	1663	13	ISM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	172	15517	172	-15517	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGGTTTGGTTTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	118428863	118456555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503
ENSMUSG00000040084.10_118430705_118460431_1	chr2	+	1661	14	ISM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	2013	11641	2013	-11641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCAGGAACGTCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	118430704	118460431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383
ENSMUSG00000040084.10_118440388_118462311_1	chr2	+	1692	13	ISM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	11696	9761	11696	-9761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGCGGAGTTTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	118440387	118462311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239
ENSMUSG00000040084.10_118445546_118467236_1	chr2	+	1694	14	ISM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	16854	4836	16854	-4836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTCTTGACAATCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	118445545	118467236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180
ENSMUSG00000040084.10_118448215_118468975_1	chr2	+	1674	13	ISM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	19523	3097	19523	-3097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTTGCCTATAGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	118448214	118468975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881
ENSMUSG00000040084.10_118448347_118470153_1	chr2	+	1663	14	ISM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	19655	1919	19655	-1919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAAGGAGCACCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	118448346	118470153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113
ENSMUSG00000040084.10_118453583_118471716_1	chr2	+	1663	13	ISM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	24891	356	24891	-356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGCTGGGGAAGACAAT	NA	NA	NA	NA	NA	NA	NA	NA	118453582	118471716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ENSMUSG00000040084.10_118457350_118471926_1	chr2	+	1665	10	ISM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	28658	146	28658	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCAGCCTCATCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	118457349	118471926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ENSMUSG00000040084.10_118460385_118472072_1	chr2	+	1717	9	ISM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	31693	0	31693	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	118460384	118472072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ENSMUSG00000040084.10_118460436_118472072_1	chr2	+	1666	9	ISM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	31744	0	31744	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	118460435	118472072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ENSMUSG00000040086.14_154533235_154674914_1	chr3	-	1622	17	ISM	ENSMUSG00000040086.14	ENST00000326637.8	2383	23	86086	99	86086	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGATTGCCTACTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	154674914	154533234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_154533288_154539282_154539343_154562157_154562268_154577729_154577863_154580768_154580822_154581127_154581181_154644387_154644493_154645219_154645415_154645510_154645569_154645661_154645755_154646668_154646726_154647244_154647332_154662576_154662727_154663326_154663422_154667409_154667515_154667587_154667733_154674844
ENSMUSG00000040086.14_154533245_154674897_1	chr3	-	1595	17	ISM	ENSMUSG00000040086.14	ENST00000326637.8	2383	23	86103	109	86103	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTCTTCTGATTGC	NA	NA	NA	NA	NA	NA	NA	NA	154674897	154533244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_154533288_154539282_154539343_154562157_154562268_154577729_154577863_154580768_154580822_154581127_154581181_154644387_154644493_154645219_154645415_154645510_154645569_154645661_154645755_154646668_154646726_154647244_154647332_154662576_154662727_154663326_154663422_154667409_154667515_154667587_154667733_154674844
ENSMUSG00000040086.14_154562157_154684884_1	chr3	-	1675	16	ISM	ENSMUSG00000040086.14	ENST00000326637.8	2383	23	76116	29021	76116	-29021	internal_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGAGTTTGTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	154684884	154562156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_154562268_154577729_154577863_154580768_154580822_154581127_154581181_154644387_154644493_154645219_154645415_154645510_154645569_154645661_154645755_154646668_154646726_154647244_154647332_154662576_154662727_154663326_154663422_154667409_154667515_154667587_154667733_154674844_154674981_154684785
ENSMUSG00000040086.14_154577730_154736014_1	chr3	-	1681	16	ISM	ENSMUSG00000040086.14	ENST00000326637.8	2383	23	24986	44594	24986	-44594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGACCGCTGCACTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	154736014	154577729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_154577863_154580768_154580822_154581127_154581181_154644387_154644493_154645219_154645415_154645510_154645569_154645661_154645755_154646668_154646726_154647244_154647332_154662576_154662727_154663326_154663422_154667409_154667515_154667587_154667733_154674844_154674981_154684785_154684885_154735897
ENSMUSG00000040086.14_154644388_154744202_1	chr3	-	1608	15	NNC	ENSMUSG00000040086.14	novel	2383	23	NA	NA	16798	-111252	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGAGCTTTCCTAAACGA	NA	NA	NA	NA	NA	NA	NA	NA	154744202	154644387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_154644493_154645219_154645415_154645510_154645569_154645661_154645755_154646668_154646726_154647244_154647332_154662576_154662727_154663326_154663422_154667409_154667515_154667587_154667733_154674844_154674981_154684785_154684885_154735897_154736009_154743024_154743142_154744147
ENSMUSG00000040086.14_154644434_154760229_1	chr3	-	1615	16	ISM	ENSMUSG00000040086.14	ENST00000326637.8	2383	23	771	111298	771	-111298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCACAGCTTGACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	154760229	154644433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_154644493_154645219_154645415_154645510_154645569_154645661_154645755_154646668_154646726_154647244_154647332_154662576_154662727_154663326_154663422_154667409_154667515_154667587_154667733_154674844_154674981_154684785_154684885_154735897_154736009_154743024_154743142_154744138_154744202_154760184
ENSMUSG00000040086.14_154644475_154760238_1	chr3	-	1583	16	ISM	ENSMUSG00000040086.14	ENST00000326637.8	2383	23	762	111339	762	-111339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTAATCATTGCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	154760238	154644474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_154644493_154645219_154645415_154645510_154645569_154645661_154645755_154646668_154646726_154647244_154647332_154662576_154662727_154663326_154663422_154667409_154667515_154667587_154667733_154674844_154674981_154684785_154684885_154735897_154736009_154743024_154743142_154744138_154744202_154760184
ENSMUSG00000040086.14_154645220_154760987_1	chr3	-	1704	16	ISM	ENSMUSG00000040086.14	ENST00000326637.8	2383	23	13	112084	13	-112084	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGGCTGTGGTCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	154760987	154645219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_154645415_154645510_154645569_154645661_154645755_154646668_154646726_154647244_154647332_154662576_154662727_154663326_154663422_154667409_154667515_154667587_154667733_154674844_154674981_154684785_154684885_154735897_154736009_154743024_154743142_154744138_154744202_154760184_154760294_154760903
ENSMUSG00000040086.14_154645313_154760987_1	chr3	-	1611	16	ISM	ENSMUSG00000040086.14	ENST00000326637.8	2383	23	13	112177	13	-112177	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTGCCTGGATGACC	NA	NA	NA	NA	NA	NA	NA	NA	154760987	154645312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_154645415_154645510_154645569_154645661_154645755_154646668_154646726_154647244_154647332_154662576_154662727_154663326_154663422_154667409_154667515_154667587_154667733_154674844_154674981_154684785_154684885_154735897_154736009_154743024_154743142_154744138_154744202_154760184_154760294_154760903
ENSMUSG00000040097.17_23974394_23975606_1	chr17	-	611	2	ISM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	7143	6	7143	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGTTGTGTGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	23975606	23974393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23974919_23975520
ENSMUSG00000040097.17_23974685_23979259_1	chr17	-	580	3	ISM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	3490	297	3490	-291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAAGGCCCCCAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	23979259	23974684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23974919_23975520_23975785_23979177
ENSMUSG00000040097.17_23974741_23979323_1	chr17	-	588	3	ISM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	3426	353	3426	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCGGAGCCACTGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	23979323	23974740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23974919_23975520_23975785_23979177
ENSMUSG00000040097.17_23974828_23979405_1	chr17	-	583	3	ISM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	3344	440	3344	-434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGAGAAAGTGTACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	23979405	23974827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23974919_23975520_23975785_23979177
ENSMUSG00000040097.17_23975545_23979657_1	chr17	-	581	3	ISM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	3092	1157	3092	-1151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACCCACTGGGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	23979657	23975544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23975785_23979177_23979442_23979580
ENSMUSG00000040097.17_23975662_23979773_1	chr17	-	580	3	ISM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	2976	1274	2976	-1268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGTCGCAGCCGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	23979773	23975661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23975785_23979177_23979442_23979580
ENSMUSG00000040097.17_23979211_23979913_1	chr17	-	564	2	ISM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	2836	4823	2836	-4817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCCCAGGCCCCTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	23979913	23979210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23979442_23979580
ENSMUSG00000040097.17_23979276_23979992_1	chr17	-	578	2	ISM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	2757	4888	2757	-4882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGCGAAGCCACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	23979992	23979275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23979442_23979580
ENSMUSG00000040097.17_23979344_23980064_1	chr17	-	582	2	ISM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	2685	4956	2685	-4950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCTGCCGGGACCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	23980064	23979343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23979442_23979580
ENSMUSG00000040097.17_23979749_23981323_1	chr17	-	526	2	ISM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	1426	5361	1426	-5355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGAAGAGGGCAGGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	23981323	23979748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23980091_23981139
ENSMUSG00000040097.17_23979865_23981521_1	chr17	-	608	2	ISM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	1228	5477	1228	-5471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGACAGCAGGAGAAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	23981521	23979864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23980091_23981139
ENSMUSG00000040097.17_23980024_23982063_1	chr17	-	610	3	ISM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	686	5636	686	-5630	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCTACAAGCGGGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	23982063	23980023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23980091_23981139_23981569_23981949
ENSMUSG00000040112.10_146944262_146974884_1	chr6	+	3557	8	FSM	ENSMUSG00000040112.10	ENSMUST00000036111.10	4162	8	0	605	0	-605	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAAGGAACAAGCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	146944261	146974884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_146944399_146947608_146947647_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962991_146972051
ENSMUSG00000040112.10_146944262_146974966_1	chr6	+	3639	8	FSM	ENSMUSG00000040112.10	ENSMUST00000036111.10	4162	8	0	523	0	-523	multi-exon	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAATTGAAACTAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	146944261	146974966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_146944399_146947608_146947647_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962991_146972051
ENSMUSG00000040112.10_146961732_146975489_1	chr6	+	3526	3	ISM	ENSMUSG00000040112.10	ENSMUST00000036111.10	4162	8	17470	0	17470	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATACTCTACTTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	146961731	146975489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_146961750_146962920_146962991_146972051
ENSMUSG00000040124.6_163212477_163231238_1	chr1	-	2533	5	NNC	ENSMUSG00000040124.6	novel	2538	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGTCTGTCATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	163231238	163212476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_163214267_163219978_163220120_163222159_163222257_163224380_163224739_163231091
ENSMUSG00000040124.6_163212477_163231238_2	chr1	-	2531	5	NNC	ENSMUSG00000040124.6	novel	2538	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGTCTGTCATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	163231238	163212476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_163214267_163219978_163220113_163222159_163222262_163224380_163224739_163231091
ENSMUSG00000040128.10_33246237_33248189_1	chr4	-	513	2	FSM	ENSMUSG00000040128.10	ENSMUST00000049357.10	1648	2	321	814	321	-814	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAGTGAGCCAAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	33248189	33246236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_33246508_33247947
ENSMUSG00000040128.10_33246358_33248311_2	chr4	-	514	2	FSM	ENSMUSG00000040128.10	ENSMUST00000049357.10	1648	2	199	935	199	-935	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAGTGACTTTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	33248311	33246357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_33246508_33247947
ENSMUSG00000040136.11_45754006_45758197_1	chr7	-	912	9	ISM	ENSMUSG00000040136.11	ENST00000646902.1	4841	39	71226	36	71207	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTGTTTCGTACTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	45758197	45754005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45754186_45754887_45754951_45755232_45755367_45756008_45756113_45756375_45756485_45756661_45756741_45757507_45757609_45757738_45757860_45758176
ENSMUSG00000040136.11_45754115_45758248_1	chr7	-	854	9	ISM	ENSMUSG00000040136.11	ENST00000646902.1	4841	39	71175	145	71156	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCGGAGAAGCTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	45758248	45754114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45754186_45754887_45754951_45755232_45755367_45756008_45756113_45756375_45756485_45756661_45756741_45757507_45757609_45757738_45757860_45758176
ENSMUSG00000040136.11_45754169_45758298_1	chr7	-	850	9	ISM	ENSMUSG00000040136.11	ENST00000646902.1	4841	39	71125	199	71106	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTGCAGACCTCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	45758298	45754168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45754186_45754887_45754951_45755232_45755367_45756008_45756113_45756375_45756485_45756661_45756741_45757507_45757609_45757738_45757860_45758176
ENSMUSG00000040136.11_45754888_45759074_1	chr7	-	935	9	ISM	ENSMUSG00000040136.11	ENST00000646902.1	4841	39	70349	918	70330	-882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGGCCACGATGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	45759074	45754887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45754951_45755232_45755367_45756008_45756113_45756375_45756485_45756661_45756741_45757507_45757609_45757738_45757860_45758176_45758291_45758964
ENSMUSG00000040136.11_45755309_45762535_1	chr7	-	836	9	ISM	ENSMUSG00000040136.11	ENST00000646902.1	4841	39	66888	1339	66869	-1303	internal_fragment	TRUE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTCGGGCCTTCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	45762535	45755308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45755367_45756008_45756113_45756375_45756485_45756661_45756741_45757507_45757609_45757738_45757860_45758176_45758291_45758964_45759068_45762488
ENSMUSG00000040136.11_45756062_45764433_1	chr7	-	839	9	ISM	ENSMUSG00000040136.11	ENST00000646902.1	4841	39	64990	2092	64971	-2056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAGATCGCCCAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	45764433	45756061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45756113_45756375_45756485_45756661_45756741_45757507_45757609_45757738_45757860_45758176_45758291_45758964_45759068_45762488_45762582_45764365
ENSMUSG00000040136.11_45756714_45766409_1	chr7	-	867	9	ISM	ENSMUSG00000040136.11	ENST00000646902.1	4841	39	63014	2744	62995	-2708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAAGTCCTCCTTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	45766409	45756713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45756741_45757507_45757609_45757738_45757860_45758176_45758291_45758964_45759068_45762488_45762582_45764365_45764524_45765197_45765268_45766329
ENSMUSG00000040136.11_45757766_45766676_1	chr7	-	880	8	ISM	ENSMUSG00000040136.11	ENST00000642271.1	4852	39	62728	3796	62728	-3760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAGAGAGCTATGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	45766676	45757765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45757860_45758176_45758291_45758964_45759068_45762488_45762582_45764365_45764524_45765197_45765268_45766329_45766497_45766595
ENSMUSG00000040136.11_45758175_45766837_1	chr7	-	949	7	ISM	ENSMUSG00000040136.11	ENST00000642271.1	4852	39	62567	4205	62567	-4169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTGCCGGCAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	45766837	45758174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45758291_45758964_45759068_45762488_45762582_45764365_45764524_45765197_45765268_45766329_45766497_45766595
ENSMUSG00000040136.11_45758964_45767493_1	chr7	-	934	7	ISM	ENSMUSG00000040136.11	ENST00000642271.1	4852	39	61911	4994	61911	-4958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGTAGCCCCACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	45767493	45758963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45759068_45762488_45762582_45764365_45764524_45765197_45765268_45766329_45766497_45766595_45766838_45767393
ENSMUSG00000040136.11_45764436_45769913_1	chr7	-	908	7	ISM	ENSMUSG00000040136.11	ENST00000642271.1	4852	39	59491	10466	59491	-10430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTGGCCCTCTTACCC	NA	NA	NA	NA	NA	NA	NA	NA	45769913	45764435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45764524_45765197_45765268_45766329_45766497_45766595_45766838_45767393_45767494_45768379_45768506_45769798
ENSMUSG00000040136.11_45766425_45773361_1	chr7	-	889	8	ISM	ENSMUSG00000040136.11	ENST00000642271.1	4852	39	56043	12455	56043	-12419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCACCTCTGTCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	45773361	45766424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45766497_45766595_45766838_45767393_45767494_45768379_45768506_45769798_45769937_45771532_45771614_45772281_45772367_45773316
ENSMUSG00000040136.11_45766711_45787479_1	chr7	-	1330	14	NIC	ENSMUSG00000040136.11	novel	4877	39	NA	NA	41925	-12705	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	957	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCCCAGCTACTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	45787479	45766710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_45766838_45767393_45767494_45768379_45768506_45769798_45769937_45771532_45771614_45772281_45772367_45773316_45773416_45774266_45774306_45776208_45776242_45784904_45785011_45785585_45785662_45786031_45786149_45786287_45786394_45787382
ENSMUSG00000040136.11_45766742_45785001_1	chr7	-	894	10	NIC	ENSMUSG00000040136.11	novel	4877	39	NA	NA	44403	-12736	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCGGCGTCCTGCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	45785001	45766741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_45766838_45767393_45767494_45768379_45768506_45769798_45769937_45771532_45771614_45772281_45772367_45773316_45773416_45774266_45774306_45776208_45776242_45784904
ENSMUSG00000040136.11_45771532_45787528_1	chr7	-	889	10	NIC	ENSMUSG00000040136.11	novel	4877	39	NA	NA	41876	-17526	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATCCCAGATGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	45787528	45771531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_45771614_45772281_45772367_45773316_45773416_45774266_45774306_45776208_45776242_45784904_45785011_45785585_45785662_45786031_45786149_45786287_45786394_45787382
ENSMUSG00000040136.11_45773314_45800319_1	chr7	-	935	10	NIC	ENSMUSG00000040136.11	novel	4877	39	NA	NA	29085	-19308	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCTCCAGGAGAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	45800319	45773313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_45773416_45774266_45774306_45776208_45776242_45784904_45785011_45785585_45785662_45786031_45786149_45786287_45786394_45787382_45787529_45788888_45788930_45800150
ENSMUSG00000040136.11_45785585_45803996_1	chr7	-	941	8	ISM	ENSMUSG00000040136.11	ENST00000642271.1	4852	39	25408	31615	25408	-31579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGCTCACCCCACCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	45803996	45785584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45785662_45786031_45786149_45786287_45786394_45787382_45787529_45788888_45788930_45800150_45800314_45800959_45801095_45803840
ENSMUSG00000040136.11_45786102_45806574_1	chr7	-	838	8	ISM	ENSMUSG00000040136.11	ENST00000642271.1	4852	39	22830	32132	22830	-32096	internal_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTCTTGGGCCCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	45806574	45786101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45786149_45786287_45786394_45787382_45787529_45788888_45788930_45800150_45800314_45800959_45801095_45803840_45803997_45806530
ENSMUSG00000040136.11_45786288_45806695_1	chr7	-	912	7	ISM	ENSMUSG00000040136.11	ENST00000642271.1	4852	39	22709	32318	22709	-32282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTCCAACCTACCCC	NA	NA	NA	NA	NA	NA	NA	NA	45806695	45786287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45786394_45787382_45787529_45788888_45788930_45800150_45800314_45800959_45801095_45803840_45803997_45806530
ENSMUSG00000040136.11_45787441_45815465_1	chr7	-	871	7	ISM	ENSMUSG00000040136.11	ENST00000642271.1	4852	39	13939	33471	13939	-33435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACACCGCTGTTCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	45815465	45787440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45787529_45788888_45788930_45800150_45800314_45800959_45801095_45803840_45803997_45806530_45806696_45815342
ENSMUSG00000040136.11_45800181_45816443_1	chr7	-	905	6	ISM	ENSMUSG00000040136.11	ENSMUST00000033123.8	4877	39	12998	46175	12961	-46175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTCGCTGTCTACACC	NA	NA	NA	NA	NA	NA	NA	NA	45816443	45800180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45800314_45800959_45801095_45803840_45803997_45806530_45806696_45815342_45815532_45816316
ENSMUSG00000040136.11_45801004_45819334_1	chr7	-	931	6	ISM	ENSMUSG00000040136.11	ENSMUST00000033123.8	4877	39	10107	46998	10070	-46998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGGCCACCAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	45819334	45801003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45801095_45803840_45803997_45806530_45806696_45815342_45815532_45816316_45816560_45819247
ENSMUSG00000040136.11_45806638_45827938_1	chr7	-	852	6	ISM	ENSMUSG00000040136.11	ENSMUST00000033123.8	4877	39	1503	52632	1466	-52632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTGTACTTCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	45827938	45806637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45806696_45815342_45815532_45816316_45816560_45819247_45819415_45824783_45824906_45827865
ENSMUSG00000040136.11_45815433_45829410_1	chr7	-	958	6	ISM	ENSMUSG00000040136.11	ENSMUST00000033123.8	4877	39	31	61427	-6	-61427	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGACCTGCTGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	45829410	45815432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45815532_45816316_45816560_45819247_45819415_45824783_45824906_45827865_45828008_45829225
ENSMUSG00000040146.10_21885321_21900256_1	chr9	-	1998	17	ISM	ENSMUSG00000040146.10	ENST00000393423.7	2081	18	489	-1	486	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGTAAGCAGAGAAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	21900256	21885320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21885433_21885683_21885837_21886903_21887026_21887087_21887157_21887245_21887342_21888034_21888157_21888240_21888274_21888485_21888573_21888677_21888726_21891797_21891883_21891979_21892084_21892585_21892802_21892899_21893040_21898794_21899010_21899146_21899201_21899341_21899572_21900144
ENSMUSG00000040146.10_21885763_21900731_1	chr9	-	1877	17	ISM	ENSMUSG00000040146.10	ENST00000393423.7	2081	18	14	441	11	-441	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGCAGCAGACGTCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	21900731	21885762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21885837_21886903_21887026_21887087_21887157_21887245_21887342_21888034_21888157_21888240_21888274_21888485_21888573_21888677_21888726_21891797_21891883_21891979_21892084_21892585_21892802_21892899_21893040_21898794_21899010_21899146_21899201_21899341_21899572_21900144_21900256_21900660
ENSMUSG00000040151.10_144072542_144171049_1	chr3	-	1895	6	NNC	ENSMUSG00000040151.10	novel	1902	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	866	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGAATTAATTATTTACA	NA	NA	NA	NA	NA	NA	NA	NA	144171049	144072541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_144073722_144141222_144141373_144143355_144143454_144153030_144153170_144159712_144159799_144170807
ENSMUSG00000040151.10_144072542_144171049_2	chr3	-	1903	6	FSM	ENSMUSG00000040151.10	ENST00000370548.3	1902	6	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGAATTAATTATTTACA	NA	NA	NA	NA	NA	NA	NA	NA	144171049	144072541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_144073722_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807
ENSMUSG00000040151.10_144072542_144171049_3	chr3	-	1897	6	NNC	ENSMUSG00000040151.10	novel	1902	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	866	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGAATTAATTATTTACA	NA	NA	NA	NA	NA	NA	NA	NA	144171049	144072541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_144073722_144141228_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807
ENSMUSG00000040152.9_117942357_117950366_1	chr2	+	2226	13	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	0	7248	0	-7248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTCACTACAGTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	117942356	117950366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117942557_117943095_117943191_117943450_117944011_117944814_117944891_117945131_117945335_117945428_117945552_117946310_117946405_117947964_117948139_117948642_117948820_117949129_117949304_117949559_117949688_117949802_117949956_117950297
ENSMUSG00000040152.9_117942483_117950400_1	chr2	+	2134	13	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	126	7214	126	-7214	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCAAGCCCGGCTATGCA	NA	NA	NA	NA	NA	NA	NA	NA	117942482	117950400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117942557_117943095_117943191_117943450_117944011_117944814_117944891_117945131_117945335_117945428_117945552_117946310_117946405_117947964_117948139_117948642_117948820_117949129_117949304_117949559_117949688_117949802_117949956_117950297
ENSMUSG00000040152.9_117943537_117951368_1	chr2	+	2155	13	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	1180	6246	1180	-6246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGGAGACCGCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	117943536	117951368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117944011_117944814_117944891_117945131_117945335_117945428_117945552_117946310_117946405_117947964_117948139_117948642_117948820_117949129_117949304_117949559_117949688_117949802_117949956_117950297_117950517_117950702_117950811_117951316
ENSMUSG00000040152.9_117943897_117953037_1	chr2	+	2133	15	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	1540	4577	1540	-4577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCCGACCATGATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	117943896	117953037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117944011_117944814_117944891_117945131_117945335_117945428_117945552_117946310_117946405_117947964_117948139_117948642_117948820_117949129_117949304_117949559_117949688_117949802_117949956_117950297_117950517_117950702_117950811_117951316_117951477_117951597_117951717_117952926
ENSMUSG00000040152.9_117943962_117953103_1	chr2	+	2134	15	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	1605	4511	1605	-4511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGATGACAGAGACAACTG	NA	NA	NA	NA	NA	NA	NA	NA	117943961	117953103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117944011_117944814_117944891_117945131_117945335_117945428_117945552_117946310_117946405_117947964_117948139_117948642_117948820_117949129_117949304_117949559_117949688_117949802_117949956_117950297_117950517_117950702_117950811_117951316_117951477_117951597_117951717_117952926
ENSMUSG00000040152.9_117945428_117953778_1	chr2	+	2123	14	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	3071	3836	3071	-3836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGTACCTTCTTCATCAAC	NA	NA	NA	NA	NA	NA	NA	NA	117945427	117953778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117945552_117946310_117946405_117947964_117948139_117948642_117948820_117949129_117949304_117949559_117949688_117949802_117949956_117950297_117950517_117950702_117950811_117951316_117951477_117951597_117951717_117952926_117953162_117953354_117953583_117953748
ENSMUSG00000040152.9_117945519_117953900_1	chr2	+	2154	14	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	3162	3714	3162	-3714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAACCCCACAAGGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	117945518	117953900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117945552_117946310_117946405_117947964_117948139_117948642_117948820_117949129_117949304_117949559_117949688_117949802_117949956_117950297_117950517_117950702_117950811_117951316_117951477_117951597_117951717_117952926_117953162_117953354_117953583_117953748
ENSMUSG00000040152.9_117948036_117954528_1	chr2	+	2208	13	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	5679	3086	5679	-3086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCGAATAGGCTCGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	117948035	117954528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117948139_117948642_117948820_117949129_117949304_117949559_117949688_117949802_117949956_117950297_117950517_117950702_117950811_117951316_117951477_117951597_117951717_117952926_117953162_117953354_117953583_117953748_117954021_117954396
ENSMUSG00000040152.9_117948740_117955535_1	chr2	+	2147	14	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	6383	2079	6383	-2079	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGCAATGCACCTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	117948739	117955535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117948820_117949129_117949304_117949559_117949688_117949802_117949956_117950297_117950517_117950702_117950811_117951316_117951477_117951597_117951717_117952926_117953162_117953354_117953583_117953748_117954021_117954396_117954495_117954600_117954741_117955502
ENSMUSG00000040152.9_117949221_117955720_1	chr2	+	2161	13	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	6864	1894	6864	-1894	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCCAAGACCATGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	117949220	117955720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117949304_117949559_117949688_117949802_117949956_117950297_117950517_117950702_117950811_117951316_117951477_117951597_117951717_117952926_117953162_117953354_117953583_117953748_117954021_117954396_117954495_117954600_117954741_117955502
ENSMUSG00000040152.9_117949610_117955839_1	chr2	+	2147	12	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	7253	1775	7253	-1775	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGCCACCTCTGAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	117949609	117955839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117949688_117949802_117949956_117950297_117950517_117950702_117950811_117951316_117951477_117951597_117951717_117952926_117953162_117953354_117953583_117953748_117954021_117954396_117954495_117954600_117954741_117955502
ENSMUSG00000040152.9_117950349_117956106_1	chr2	+	2132	10	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	7992	1508	7992	-1508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCACACAGGCACTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	117950348	117956106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117950517_117950702_117950811_117951316_117951477_117951597_117951717_117952926_117953162_117953354_117953583_117953748_117954021_117954396_117954495_117954600_117954741_117955502
ENSMUSG00000040152.9_117950486_117956238_1	chr2	+	2127	10	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	8129	1376	8129	-1376	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGTCACGCTGAAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	117950485	117956238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117950517_117950702_117950811_117951316_117951477_117951597_117951717_117952926_117953162_117953354_117953583_117953748_117954021_117954396_117954495_117954600_117954741_117955502
ENSMUSG00000040152.9_117951632_117956592_1	chr2	+	2148	7	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	9275	1022	9275	-1022	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAATCATCTTCGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	117951631	117956592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117951717_117952926_117953162_117953354_117953583_117953748_117954021_117954396_117954495_117954600_117954741_117955502
ENSMUSG00000040152.9_117953054_117956812_1	chr2	+	2156	6	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	10697	802	10697	-802	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCCTTTGTTTTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	117953053	117956812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117953162_117953354_117953583_117953748_117954021_117954396_117954495_117954600_117954741_117955502
ENSMUSG00000040152.9_117953421_117956936_1	chr2	+	2106	5	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	11064	678	11064	-678	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAGAAGAAAGAAAACACAA	NA	NA	NA	NA	NA	NA	NA	NA	117953420	117956936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117953583_117953748_117954021_117954396_117954495_117954600_117954741_117955502
ENSMUSG00000040152.9_117953421_117957042_1	chr2	+	2212	5	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	11064	572	11064	-572	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGAATTTTGGATTAAG	NA	NA	NA	NA	NA	NA	NA	NA	117953420	117957042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117953583_117953748_117954021_117954396_117954495_117954600_117954741_117955502
ENSMUSG00000040152.9_117953785_117957171_1	chr2	+	2143	4	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	11428	443	11428	-443	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGTAATGTTAAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	117953784	117957171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117954021_117954396_117954495_117954600_117954741_117955502
ENSMUSG00000040152.9_117953932_117957230_1	chr2	+	2055	4	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	11575	384	11575	-384	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTTGCTTTTATTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	117953931	117957230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117954021_117954396_117954495_117954600_117954741_117955502
ENSMUSG00000040152.9_117954423_117957423_1	chr2	+	2133	3	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	12066	191	12066	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTGTTTTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	117954422	117957423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117954495_117954600_117954741_117955502
ENSMUSG00000040152.9_117954661_117957614_1	chr2	+	2192	2	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	12304	0	12304	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGGTGTCTGTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	117954660	117957614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_117954741_117955502
ENSMUSG00000040158.13_73067909_73072446_1	chr11	+	991	4	FSM	ENSMUSG00000040158.13	ENSMUST00000040687.12	1523	4	0	532	0	-427	multi-exon	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCTGCCCTGTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	73067908	73072446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_73068169_73071214_73071335_73071556_73071635_73071913
ENSMUSG00000040158.13_73068096_73072574_1	chr11	+	932	4	FSM	ENSMUSG00000040158.13	ENSMUST00000040687.12	1523	4	187	404	0	-299	multi-exon	FALSE	canonical	NA	NA	NA	NA	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCTTCATTCCCCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	73068095	73072574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_73068169_73071214_73071335_73071556_73071635_73071913
ENSMUSG00000040158.13_73071258_73072724_1	chr11	+	966	3	ISM	ENSMUSG00000040158.13	ENSMUST00000040687.12	1523	4	3349	254	3162	-149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTGTTTGAATTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	73071257	73072724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_73071335_73071556_73071635_73071913
ENSMUSG00000040158.13_73071276_73072716_1	chr11	+	940	3	ISM	ENSMUSG00000040158.13	ENSMUST00000040687.12	1523	4	3367	262	3180	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTATCTTACTGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	73071275	73072716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_73071335_73071556_73071635_73071913
ENSMUSG00000040158.13_73071555_73072873_1	chr11	+	1040	2	ISM	ENSMUSG00000040158.13	ENSMUST00000040687.12	1523	4	3646	105	3459	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGGTTTCTGTTAGATG	NA	NA	NA	NA	NA	NA	NA	NA	73071554	73072873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_73071635_73071913
ENSMUSG00000040164.4_164006453_164010219_1	chr2	-	971	2	ISM	ENSMUSG00000040164.4	ENST00000537075.3	1769	3	2907	0	2814	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTCCCCACAGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	164010219	164006452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164006936_164009731
ENSMUSG00000040164.4_164006568_164010343_1	chr2	-	980	2	ISM	ENSMUSG00000040164.4	ENST00000537075.3	1769	3	2783	115	2690	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCTCTGGAAACATCCC	NA	NA	NA	NA	NA	NA	NA	NA	164010343	164006567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164006936_164009731
ENSMUSG00000040164.4_164006726_164010500_1	chr2	-	979	2	ISM	ENSMUSG00000040164.4	ENST00000537075.3	1769	3	2626	273	2533	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCGGGGGCATCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	164010500	164006725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164006936_164009731
ENSMUSG00000040164.4_164009948_164013033_1	chr2	-	977	2	ISM	ENSMUSG00000040164.4	ENST00000537075.3	1769	3	93	3495	0	-3495	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACCCGCTCAACCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	164013033	164009947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_164010812_164012920
ENSMUSG00000040167.17_130990381_130991739_1	chr7	-	1217	2	ISM	ENSMUSG00000040167.17	ENST00000617859.4	4279	5	19060	2	19060	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTTGTTTTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	130991739	130990380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130991448_130991589
ENSMUSG00000040167.17_130990804_130992161_1	chr7	-	1216	2	ISM	ENSMUSG00000040167.17	ENST00000617859.4	4279	5	18638	425	18638	-423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTCCATCAGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	130992161	130990803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130991448_130991589
ENSMUSG00000040167.17_130990918_130992241_1	chr7	-	1182	2	ISM	ENSMUSG00000040167.17	ENST00000617859.4	4279	5	18558	539	18558	-537	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTTTAAAGAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	130992241	130990917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130991448_130991589
ENSMUSG00000040167.17_130993139_130995541_1	chr7	-	1229	2	ISM	ENSMUSG00000040167.17	ENST00000617859.4	4279	5	15258	2760	15258	-1042	internal_fragment	TRUE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTATGAGAGTTAAAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	130995541	130993138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130994310_130995483
ENSMUSG00000040167.17_130993193_130995593_1	chr7	-	1227	2	ISM	ENSMUSG00000040167.17	ENST00000617859.4	4279	5	15206	2814	15206	-1096	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGTTATTTATGCATTAG	NA	NA	NA	NA	NA	NA	NA	NA	130995593	130993192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130994310_130995483
ENSMUSG00000040167.17_130993254_130995639_1	chr7	-	1212	2	ISM	ENSMUSG00000040167.17	ENST00000617859.4	4279	5	15160	2875	15160	-1157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTATAAAATAGAAGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	130995639	130993253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130994310_130995483
ENSMUSG00000040167.17_130993375_130998528_1	chr7	-	1249	3	ISM	ENSMUSG00000040167.17	ENST00000617859.4	4279	5	12271	2996	12271	-1278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCACTGAACACAATCAAC	NA	NA	NA	NA	NA	NA	NA	NA	130998528	130993374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130994310_130995483_130995667_130998397
ENSMUSG00000040167.17_130993463_131010686_1	chr7	-	1224	4	ISM	ENSMUSG00000040167.17	ENST00000617859.4	4279	5	113	3084	113	-1366	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGCCCCTTTCAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	131010686	130993462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130994310_130995483_130995667_130998397_130998557_131010651
ENSMUSG00000040167.17_130993507_131010748_1	chr7	-	1242	4	ISM	ENSMUSG00000040167.17	ENST00000617859.4	4279	5	51	3128	51	-1410	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACAACGTCCTTTACAC	NA	NA	NA	NA	NA	NA	NA	NA	131010748	130993506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130994310_130995483_130995667_130998397_130998557_131010651
ENSMUSG00000040167.17_130993508_131010735_1	chr7	-	1224	4	NNC	ENSMUSG00000040167.17	novel	4290	5	NA	NA	64	-1411	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGACAACGTCCTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	131010735	130993507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_130994310_130995483_130995667_130998397_130998553_131010651
ENSMUSG00000040167.17_130993571_131010789_1	chr7	-	1219	4	ISM	ENSMUSG00000040167.17	ENST00000617859.4	4279	5	10	3192	10	-1474	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACCCTGCCGGTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	131010789	130993570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130994310_130995483_130995667_130998397_130998557_131010651
ENSMUSG00000040174.15_93826592_93838490_1	chr2	-	517	5	NNC	ENSMUSG00000040174.15	novel	699	6	NA	NA	417	-63	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCATTGCTTCCCTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	93838490	93826591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93838360
ENSMUSG00000040174.15_93826592_93838849_1	chr2	-	572	6	NNC	ENSMUSG00000040174.15	novel	699	6	NA	NA	58	-63	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCATTGCTTCCCTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	93838849	93826591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_93826738_93831769_93831859_93833397_93833502_93835083_93835126_93838358_93838488_93838787
ENSMUSG00000040174.15_93826592_93838858_1	chr2	-	587	6	FSM	ENSMUSG00000040174.15	ENST00000302708.9	699	6	49	63	49	-63	multi-exon	FALSE	canonical	NA	NA	NA	NA	2334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCATTGCTTCCCTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	93838858	93826591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93838358_93838488_93838787
ENSMUSG00000040174.15_93826592_93838877_1	chr2	-	606	6	FSM	ENSMUSG00000040174.15	ENST00000302708.9	699	6	30	63	30	-63	multi-exon	FALSE	canonical	NA	NA	NA	NA	2357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCATTGCTTCCCTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	93838877	93826591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93838358_93838488_93838787
ENSMUSG00000040181.15_162657130_162660606_1	chr1	-	829	2	ISM	ENSMUSG00000040181.15	ENSMUST00000046049.14	2388	9	33573	0	26932	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGGTCTTTCGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	162660606	162657129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_162657884_162660531
ENSMUSG00000040181.15_162657619_162663791_1	chr1	-	785	4	ISM	ENSMUSG00000040181.15	ENST00000402921.6	1561	8	30382	89	23747	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTTCCTTTGAAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	162663791	162657618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_162657884_162660531_162660605_162661098_162661455_162663700
ENSMUSG00000040181.15_162657619_162663900_1	chr1	-	894	4	ISM	ENSMUSG00000040181.15	ENST00000402921.6	1561	8	30273	89	23638	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1715	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTTCCTTTGAAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	162663900	162657618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_162657884_162660531_162660605_162661098_162661455_162663700
ENSMUSG00000040181.15_162657762_162667259_1	chr1	-	824	5	ISM	ENSMUSG00000040181.15	ENST00000402921.6	1561	8	26914	232	20279	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGCATCTTCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	162667259	162657761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_162657884_162660531_162660605_162661098_162661455_162663700_162663901_162667186
ENSMUSG00000040181.15_162661373_162687041_1	chr1	-	636	5	ISM	ENSMUSG00000040181.15	ENST00000402921.6	1561	8	7132	3843	497	-3843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAGGTAAAGGAAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	162687041	162661372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_162661455_162663700_162663901_162667186_162667330_162677630_162677794_162686993
ENSMUSG00000040181.15_162661373_162687041_2	chr1	-	825	6	ISM	ENSMUSG00000040181.15	ENSMUST00000046049.14	2388	9	7138	4243	497	-3843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAGGTAAAGGAAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	162687041	162661372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_162661455_162663700_162663901_162667186_162667330_162677630_162677794_162678923_162679113_162686993
ENSMUSG00000040181.15_162663839_162693879_1	chr1	-	767	6	ISM	ENSMUSG00000040181.15	ENSMUST00000046049.14	2388	9	300	6709	294	3948	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGACATGATATTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	162693879	162663838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_162663901_162667186_162667330_162677630_162677794_162678923_162679113_162686993_162687132_162693807
ENSMUSG00000040181.15_162663839_162693934_1	chr1	-	822	6	ISM	ENSMUSG00000040181.15	ENSMUST00000046049.14	2388	9	245	6709	239	3948	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGACATGATATTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	162693934	162663838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_162663901_162667186_162667330_162677630_162677794_162678923_162679113_162686993_162687132_162693807
ENSMUSG00000040181.15_162663839_162694179_1	chr1	-	646	5	ISM	ENSMUSG00000040181.15	ENST00000402921.6	1561	8	-6	6309	0	3948	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGACATGATATTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	162694179	162663838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_162663901_162667186_162667330_162677630_162677794_162686993_162687132_162694039
ENSMUSG00000040181.15_162663865_162693970_1	chr1	-	832	6	ISM	ENSMUSG00000040181.15	ENSMUST00000046049.14	2388	9	209	6735	203	3922	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGAGTCTTTGATTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	162693970	162663864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_162663901_162667186_162667330_162677630_162677794_162678923_162679113_162686993_162687132_162693807
ENSMUSG00000040181.15_162667243_162694179_1	chr1	-	949	5	ISM	ENSMUSG00000040181.15	ENSMUST00000046049.14	2388	9	0	10113	0	544	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGGGAATTCTGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	162694179	162667242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_162667330_162677630_162677794_162678923_162679113_162686993_162687132_162693807
ENSMUSG00000040181.15_162667294_162694179_1	chr1	-	898	5	ISM	ENSMUSG00000040181.15	ENSMUST00000046049.14	2388	9	0	10164	0	493	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGTATAAACATCCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	162694179	162667293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_162667330_162677630_162677794_162678923_162679113_162686993_162687132_162693807
ENSMUSG00000040183.14_32806340_32836368_1	chr4	-	1727	14	ISM	ENSMUSG00000040183.14	ENST00000522441.5	2364	16	27764	229	24074	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAGCAGCAAGCAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	32836368	32806339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334
ENSMUSG00000040183.14_32806489_32860442_1	chr4	-	1764	15	ISM	ENSMUSG00000040183.14	ENST00000522441.5	2364	16	3690	378	0	-378	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATCAAGGCCCCGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	32860442	32806488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860321
ENSMUSG00000040183.14_32806534_32860458_1	chr4	-	1735	15	ISM	ENSMUSG00000040183.14	ENST00000522441.5	2364	16	3674	423	-16	-423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCAGGAGCTGCCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	32860458	32806533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860321
ENSMUSG00000040183.14_32806601_32860509_1	chr4	-	1719	15	ISM	ENSMUSG00000040183.14	ENST00000522441.5	2364	16	3623	490	-67	-490	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGACAGCTCCTCTCAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	32860509	32806600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860321
ENSMUSG00000040183.14_32821271_32864132_1	chr4	-	1001	9	FSM	ENSMUSG00000040183.14	ENST00000485637.5	1029	9	0	28	0	-28	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGCTCCCCAGGTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	32864132	32821270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32864056
ENSMUSG00000040188.11_57468226_57494780_1	chr9	+	1042	9	FSM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	0	1298	0	-1298	multi-exon	TRUE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAACCTTTCGCGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	57468225	57494780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
ENSMUSG00000040188.11_57468257_57494847_1	chr9	+	1078	9	FSM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	31	1231	31	-1231	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCTTCCCTGAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	57468256	57494847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
ENSMUSG00000040188.11_57468257_57494885_1	chr9	+	1116	9	FSM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	31	1193	31	-1193	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGAGCTGCACTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	57468256	57494885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
ENSMUSG00000040188.11_57484470_57495015_1	chr9	+	1115	8	ISM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	16244	1063	16244	-1063	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGACAAGGACTTTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57484469	57495015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
ENSMUSG00000040188.11_57486751_57495174_1	chr9	+	1065	6	ISM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	18525	904	18525	-904	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGCTCACTGTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	57486750	57495174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
ENSMUSG00000040188.11_57488066_57495299_1	chr9	+	1108	5	ISM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	19840	779	19840	-779	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTCTACTCTAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	57488065	57495299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
ENSMUSG00000040188.11_57488773_57495420_1	chr9	+	1099	4	ISM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	20547	658	20547	-658	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGATAGCACCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	57488772	57495420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57488933_57490134_57490237_57494362_57494484_57494704
ENSMUSG00000040188.11_57490186_57495558_1	chr9	+	1026	3	ISM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	21960	520	21960	-520	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCAGTCTTGTGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	57490185	57495558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57490237_57494362_57494484_57494704
ENSMUSG00000040188.11_57490209_57495645_1	chr9	+	1090	3	ISM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	21983	433	21983	-433	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTATCTTCAGCAATAC	NA	NA	NA	NA	NA	NA	NA	NA	57490208	57495645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57490237_57494362_57494484_57494704
ENSMUSG00000040204.7_65797644_65809015_1	chr9	+	586	5	FSM	ENSMUSG00000040204.7	ENST00000558008.3	533	5	-50	-3	-50	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGATGTAAGAATGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	65797643	65809015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65803734_65803791_65808839
ENSMUSG00000040204.7_65797644_65809860_1	chr9	+	1375	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	125	688	-50	-688	multi-exon	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTTGGAACTCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	65797643	65809860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
ENSMUSG00000040204.7_65800654_65810000_1	chr9	+	1324	2	ISM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	3135	548	2960	-548	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAGATGACTTGAGATCA	NA	NA	NA	NA	NA	NA	NA	NA	65800653	65810000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65800817_65808839
ENSMUSG00000040204.7_65800696_65810060_1	chr9	+	1342	2	ISM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	3177	488	3002	-488	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTATATAGCCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	65800695	65810060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65800817_65808839
ENSMUSG00000040204.7_65800745_65810113_1	chr9	+	1346	2	ISM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	3226	435	3051	-435	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGAGATCTGCCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	65800744	65810113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65800817_65808839
ENSMUSG00000040212.13_45567447_45570275_1	chr7	-	783	5	NNC	ENSMUSG00000040212.13	novel	784	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGGCTCCTCTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	45570275	45567446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_45567654_45568741_45568883_45569358_45569462_45569712_45569829_45570059
ENSMUSG00000040212.13_45569430_45570726_1	chr7	-	209	3	ISM	ENSMUSG00000040212.13	ENSMUST00000038876.13	736	5	102	1983	102	-1975	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTGTGGTATGACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	45570726	45569429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45569462_45569712_45569829_45570665
ENSMUSG00000040220.11_124247365_124250877_1	chr8	+	324	3	ISM	ENSMUSG00000040220.11	ENSMUST00000212923.2	3469	10	1770	11268	1770	-11268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGAGGGCACCGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	124247364	124250877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124247430_124249676_124249875_124250816
ENSMUSG00000040220.11_124249701_124250994_1	chr8	+	352	2	ISM	ENSMUSG00000040220.11	ENSMUST00000212923.2	3469	10	4106	11151	4106	-11151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGAGGTGGTCATAAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	124249700	124250994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124249875_124250816
ENSMUSG00000040220.11_124250851_124253304_1	chr8	+	329	3	ISM	ENSMUSG00000040220.11	ENSMUST00000212923.2	3469	10	5256	8841	5256	-8841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATCAGCACTCTGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	124250850	124253304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124251024_124252357_124252413_124253203
ENSMUSG00000040220.11_124250908_124253349_1	chr8	+	317	3	ISM	ENSMUSG00000040220.11	ENSMUST00000212923.2	3469	10	5313	8796	5313	-8796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAAGAACTACTACAACGA	NA	NA	NA	NA	NA	NA	NA	NA	124250907	124253349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124251024_124252357_124252413_124253203
ENSMUSG00000040220.11_124250957_124253409_1	chr8	+	328	3	ISM	ENSMUSG00000040220.11	ENSMUST00000212923.2	3469	10	5362	8736	5362	-8736	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGACGCGCTCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	124250956	124253409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124251024_124252357_124252413_124253203
ENSMUSG00000040220.11_124252359_124254706_1	chr8	+	316	3	ISM	ENSMUSG00000040220.11	ENSMUST00000212923.2	3469	10	6764	7439	6764	-7439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACTCTGCAGAACCGGC	NA	NA	NA	NA	NA	NA	NA	NA	124252358	124254706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124252413_124253203_124253410_124254650
ENSMUSG00000040220.11_124253364_124257586_1	chr8	+	322	4	ISM	ENSMUSG00000040220.11	ENSMUST00000212923.2	3469	10	7769	4559	7769	-4559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTATCGGAAGTTTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	124253363	124257586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124253410_124254650_124254819_124255116_124255204_124257565
ENSMUSG00000040220.11_124254711_124257702_1	chr8	+	332	3	ISM	ENSMUSG00000040220.11	ENSMUST00000212923.2	3469	10	9116	4443	9116	-4443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTCAATGAGGTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	124254710	124257702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124254819_124255116_124255204_124257565
ENSMUSG00000040220.11_124255131_124260029_1	chr8	+	321	3	ISM	ENSMUSG00000040220.11	ENSMUST00000212923.2	3469	10	9536	2116	9536	-2116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTATGAGCTGGCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	124255130	124260029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124255204_124257565_124257776_124259991
ENSMUSG00000040220.11_124257564_124263170_1	chr8	+	337	3	ISM	ENSMUSG00000040220.11	ENSMUST00000093043.7	1681	11	11991	219	11969	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAATGTGGGGTTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	124257563	124263170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124257776_124259991_124260058_124263111
ENSMUSG00000040220.11_124257624_124263213_1	chr8	+	320	3	ISM	ENSMUSG00000040220.11	ENSMUST00000093043.7	1681	11	12051	176	12029	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACACTGGGACAGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	124257623	124263213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124257776_124259991_124260058_124263111
ENSMUSG00000040229.12_13499766_13506817_1	chrX	+	1403	2	FSM	ENSMUSG00000040229.12	ENST00000378138.5	1702	2	22	277	22	-277	multi-exon	FALSE	canonical	NA	NA	NA	NA	1129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTTTAACAACGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	13499765	13506817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_13499797_13505445
ENSMUSG00000040234.17_146503850_146523409_1	chr6	-	2639	9	ISM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	12686	0	12686	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAATGTCCTCCTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	146523409	146503849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372
ENSMUSG00000040234.17_146504085_146525112_1	chr6	-	2539	10	ISM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	10983	235	10983	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATATATATATATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	146525112	146504084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061
ENSMUSG00000040234.17_146504232_146527677_1	chr6	-	2576	11	ISM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	8418	382	8418	-382	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTTGACATTTCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	146527677	146504231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593
ENSMUSG00000040234.17_146504392_146535996_1	chr6	-	2600	12	FSM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	99	542	99	-542	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATTGATCACTTAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	146535996	146504391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ENSMUSG00000040234.17_146504443_146536004_1	chr6	-	2557	12	FSM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	91	593	91	-593	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTAATGATTGCTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	146536004	146504442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ENSMUSG00000040234.17_146504508_146536095_1	chr6	-	2583	12	FSM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	0	658	0	-658	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGTGACTGGACCGTATT	NA	NA	NA	NA	NA	NA	NA	NA	146536095	146504507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ENSMUSG00000040236.5_3726299_3730581_1	chr8	+	1872	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	0	674	0	-339	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTGGCACACCAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	3726298	3730581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_3726604_3729014
ENSMUSG00000040236.5_3726510_3730677_1	chr8	+	1757	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	211	578	0	-243	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTCCGGCCGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	3726509	3730677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_3726604_3729014
ENSMUSG00000040236.5_3726510_3730730_1	chr8	+	1810	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	211	525	0	-190	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAATCCCAACCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	3726509	3730730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_3726604_3729014
ENSMUSG00000040236.5_3729036_3729609_1	chr8	+	373	2	FSM	ENSMUSG00000040236.5	ENST00000595985.1	386	2	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCAGATCCTGTTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	3729035	3729609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_3729093_3729293
ENSMUSG00000040242.15_146479419_146494365_1	chr6	+	913	5	NNC	ENSMUSG00000040242.15	novel	918	5	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTGCTTTTCATGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	146479418	146494365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_146479707_146487179_146487317_146490237_146490349_146491391_146491535_146494131
ENSMUSG00000040242.15_146479419_146494365_2	chr6	+	914	5	NNC	ENSMUSG00000040242.15	novel	918	5	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTGCTTTTCATGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	146479418	146494365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_146479707_146487179_146487317_146490243_146490356_146491391_146491535_146494131
ENSMUSG00000040242.15_146479440_146499107_1	chr6	+	1094	6	FSM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	83	1589	21	-1589	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGCCACAGAGTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	146479439	146499107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146496673_146496788_146498792
ENSMUSG00000040242.15_146490264_146499444_1	chr6	+	1001	4	ISM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	10907	1252	10845	-1252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAACATACTTACACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	146490263	146499444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_146490356_146491391_146491535_146496673_146496788_146498792
ENSMUSG00000040242.15_146490333_146496708_1	chr6	+	315	4	ISM	ENSMUSG00000040242.15	ENSMUST00000111663.9	2880	7	10976	3988	10914	2345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAGCAGTAATGAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	146490332	146496708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_146490356_146491391_146491535_146494131_146494246_146496673
ENSMUSG00000040242.15_146491418_146499564_1	chr6	+	1003	3	ISM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	12061	1132	11999	-1132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGACACATTTAGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	146491417	146499564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_146491535_146496673_146496788_146498792
ENSMUSG00000040242.15_146491487_146498837_1	chr6	+	321	4	ISM	ENSMUSG00000040242.15	ENSMUST00000111663.9	2880	7	12130	1859	12068	-1859	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTTGAACCTTCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	146491486	146498837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_146491535_146494131_146494246_146496673_146496788_146498792
ENSMUSG00000040242.15_146494179_146498919_1	chr6	+	308	3	ISM	ENSMUSG00000040242.15	ENSMUST00000111663.9	2880	7	14822	1777	14760	-1777	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGAGCTGAGTGGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	146494178	146498919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_146494246_146496673_146496788_146498792
ENSMUSG00000040247.7_4234913_4239241_1	chr19	-	522	5	ISM	ENSMUSG00000040247.7	ENST00000312390.9	1205	8	1574	245	1574	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCACCAAACCTGAGATA	NA	NA	NA	NA	NA	NA	NA	NA	4239241	4234912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4235073_4235350_4235506_4238244_4238311_4238942_4239054_4239211
ENSMUSG00000040247.7_4234977_4239290_1	chr19	-	507	5	ISM	ENSMUSG00000040247.7	ENST00000312390.9	1205	8	1525	309	1525	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGGCCCGCCTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	4239290	4234976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4235073_4235350_4235506_4238244_4238311_4238942_4239054_4239211
ENSMUSG00000040247.7_4235049_4239426_1	chr19	-	485	6	ISM	ENSMUSG00000040247.7	ENST00000312390.9	1205	8	1389	381	1389	-381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGTCCTGCAACAGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	4239426	4235048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4235073_4235350_4235506_4238244_4238311_4238942_4239054_4239211_4239319_4239404
ENSMUSG00000040247.7_4235054_4239318_1	chr19	-	458	5	ISM	ENSMUSG00000040247.7	ENST00000312390.9	1205	8	1497	386	1497	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCGAGTCCTGCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	4239318	4235053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4235073_4235350_4235506_4238244_4238311_4238942_4239054_4239211
ENSMUSG00000040247.7_4235348_4239512_1	chr19	-	550	5	ISM	ENSMUSG00000040247.7	ENST00000312390.9	1205	8	1303	680	1303	-680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATCTCTCTTAGCAATCC	NA	NA	NA	NA	NA	NA	NA	NA	4239512	4235347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4235506_4238244_4238311_4238942_4239054_4239211_4239319_4239404
ENSMUSG00000040247.7_4235444_4241183_1	chr19	-	1086	9	ISM	ENSMUSG00000040247.7	ENSMUST00000235450.2	1996	10	100	1088	100	-776	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGCACAGCATGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	4241183	4235443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4235506_4237940_4238131_4238244_4238311_4238942_4239058_4239211_4239319_4239404_4239513_4239862_4239963_4240662_4240835_4241017
ENSMUSG00000040247.7_4235455_4239920_1	chr19	-	501	6	ISM	ENSMUSG00000040247.7	ENST00000312390.9	1205	8	895	787	895	-787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTGTAGAACAGCGCACA	NA	NA	NA	NA	NA	NA	NA	NA	4239920	4235454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4235506_4238244_4238311_4238942_4239054_4239211_4239319_4239404_4239513_4239862
ENSMUSG00000040247.7_4238253_4240684_1	chr19	-	510	6	ISM	ENSMUSG00000040247.7	ENSMUST00000045864.4	1658	10	343	3866	131	-3585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGGTGAGAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	4240684	4238252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4238311_4238942_4239058_4239211_4239319_4239404_4239513_4239862_4239963_4240662
ENSMUSG00000040250.15_146451130_146452274_1	chr6	-	492	2	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	26560	-3	26560	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGGAGTGTTACTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	146452274	146451129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146451484_146452136
ENSMUSG00000040250.15_146451139_146459091_1	chr6	-	1586	10	ISM	ENSMUSG00000040250.15	ENSMUST00000032427.15	3059	18	20242	9	19743	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCAAGTATCGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	146459091	146451138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030
ENSMUSG00000040250.15_146451306_146453959_1	chr6	-	404	3	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	24875	173	24875	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTTTGTACTAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	146453959	146451305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146451484_146452136_146452273_146453869
ENSMUSG00000040250.15_146451320_146461669_1	chr6	-	1480	11	ISM	ENSMUSG00000040250.15	ENSMUST00000032427.15	3059	18	17664	190	17165	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	966	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCAATGAATTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	146461669	146451319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623
ENSMUSG00000040250.15_146451429_146455533_1	chr6	-	383	4	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	23301	296	23301	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATTTAGAATATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	146455533	146451428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481
ENSMUSG00000040250.15_146455684_146457733_1	chr6	-	460	4	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	21101	4551	21101	-4551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGAGACTCTCGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	146457733	146455683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146455713_146455989_146456145_146456425_146456597_146457628
ENSMUSG00000040250.15_146455990_146477958_1	chr6	-	1585	12	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	876	4857	876	-4857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	947	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGCTGTTTTCTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	146477958	146455989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722
ENSMUSG00000040250.15_146456502_146478848_1	chr6	-	1404	12	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	-14	5369	-14	-5369	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATCAGTTAGAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	146478848	146456501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ENSMUSG00000040250.15_146456502_146478901_1	chr6	-	1457	12	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	-67	5369	-67	-5369	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATCAGTTAGAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	146478901	146456501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ENSMUSG00000040250.15_146457648_146479065_1	chr6	-	1507	11	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	-231	6515	-231	-6515	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGACTACCGGATTACAG	NA	NA	NA	NA	NA	NA	NA	NA	146479065	146457647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ENSMUSG00000040250.15_146457668_146463256_1	chr6	-	435	5	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	15578	6535	15578	-6535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGCTGTGGAGGAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	146463256	146457667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226
ENSMUSG00000040250.15_146457710_146463318_1	chr6	-	455	5	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	15516	6577	15516	-6577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTCTCGATCCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	146463318	146457709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226
ENSMUSG00000040250.15_146457725_146479140_1	chr6	-	1505	11	ISM	ENSMUSG00000040250.15	ENSMUST00000032427.15	3059	18	193	6595	193	-6592	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCATGTCCTTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	146479140	146457724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ENSMUSG00000040250.15_146459031_146467206_1	chr6	-	476	5	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	11628	7898	11628	-7898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGAGATGGGCCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	146467206	146459030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125
ENSMUSG00000040250.15_146463317_146476249_1	chr6	-	464	5	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	2585	12184	2585	-12184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCGGCATCTTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	146476249	146463316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199
ENSMUSG00000040260.9_49765455_49766158_1	chr17	-	399	2	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	39756	64	39756	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGTGTCGGAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	49766158	49765454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49765776_49766080
ENSMUSG00000040260.9_49765455_49766200_1	chr17	-	441	2	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	39714	64	39714	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGTGTCGGAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	49766200	49765454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49765776_49766080
ENSMUSG00000040260.9_49765455_49766248_1	chr17	-	489	2	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	39666	64	39666	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGTGTCGGAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	49766248	49765454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49765776_49766080
ENSMUSG00000040260.9_49765563_49767684_1	chr17	-	434	3	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	38230	172	38230	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGACTTGGAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	49767684	49765562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49765776_49766080_49766252_49767634
ENSMUSG00000040260.9_49765748_49771029_1	chr17	-	468	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	34885	357	34885	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGAGGCAGAGGAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	49771029	49765747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49765776_49766080_49766252_49767634_49767767_49769168_49769230_49770953
ENSMUSG00000040260.9_49766141_49771508_1	chr17	-	430	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	34406	750	34406	-686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGGCCATGCGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	49771508	49766140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49766252_49767634_49767767_49769168_49769230_49770953_49771062_49771490
ENSMUSG00000040260.9_49766196_49771556_1	chr17	-	423	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	34358	805	34358	-741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTGGCATCTTCGACA	NA	NA	NA	NA	NA	NA	NA	NA	49771556	49766195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49766252_49767634_49767767_49769168_49769230_49770953_49771062_49771490
ENSMUSG00000040260.9_49767718_49776443_1	chr17	-	430	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	29471	2327	29471	-2263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTCATGAGTGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	49776443	49767717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49767767_49769168_49769230_49770953_49771062_49771490_49771660_49776400
ENSMUSG00000040260.9_49770954_49776794_1	chr17	-	473	4	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	29120	5563	29120	-5499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCAGTCCCTCAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	49776794	49770953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49771062_49771490_49771660_49776400_49776490_49776687
ENSMUSG00000040260.9_49771029_49779031_1	chr17	-	439	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	26883	5638	26883	-5574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAGCACTTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	49779031	49771028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49771062_49771490_49771660_49776400_49776490_49776687_49776795_49778990
ENSMUSG00000040260.9_49771514_49780328_1	chr17	-	442	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	25586	6123	25586	-6059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACCAAGTCCAGCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	49780328	49771513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49771660_49776400_49776490_49776687_49776795_49778990_49779076_49780313
ENSMUSG00000040260.9_49771579_49780383_1	chr17	-	432	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	25531	6188	25531	-6124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGAACAAGGGGCAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	49780383	49771578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49771660_49776400_49776490_49776687_49776795_49778990_49779076_49780313
ENSMUSG00000040260.9_49776733_49786750_1	chr17	-	419	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	19164	11342	19164	10537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGGATGGCGCGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	49786750	49776732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49776795_49778990_49779076_49780313_49780421_49783475_49783584_49786693
ENSMUSG00000040260.9_49776782_49786812_1	chr17	-	432	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	19102	11391	19102	10488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCGAGAAGAGCGACATT	NA	NA	NA	NA	NA	NA	NA	NA	49786812	49776781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49776795_49778990_49779076_49780313_49780421_49783475_49783584_49786693
ENSMUSG00000040260.9_49779046_49786929_1	chr17	-	481	4	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	18985	13655	18985	8224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATCTTGCGGATGGATG	NA	NA	NA	NA	NA	NA	NA	NA	49786929	49779045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49779076_49780313_49780421_49783475_49783584_49786693
ENSMUSG00000040260.9_49786855_49790010_1	chr17	-	439	4	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	15904	21464	15904	415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGAGGGCCTCCCATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	49790010	49786854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49786994_49787457_49787643_49787751_49787811_49789954
ENSMUSG00000040260.9_49786912_49790058_1	chr17	-	430	4	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	15856	21521	15856	358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCACCACCTCTCCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	49790058	49786911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49786994_49787457_49787643_49787751_49787811_49789954
ENSMUSG00000040260.9_49790030_49796035_1	chr17	-	416	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	9879	24639	9879	-2760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCAGGATGAGCGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	49796035	49790029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49790094_49792404_49792523_49793471_49793539_49795214_49795319_49795972
ENSMUSG00000040260.9_49792411_49797039_1	chr17	-	412	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	8875	27020	8875	-5141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTGTGAGTACCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	49797039	49792410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49792523_49793471_49793539_49795214_49795319_49795972_49796084_49797021
ENSMUSG00000040260.9_49792457_49797097_1	chr17	-	424	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	8817	27066	8817	-5187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTATCCCTGCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	49797097	49792456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49792523_49793471_49793539_49795214_49795319_49795972_49796084_49797021
ENSMUSG00000040260.9_49792506_49797153_1	chr17	-	431	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	8761	27115	8761	-5236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCCTCCCAGATGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	49797153	49792505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49792523_49793471_49793539_49795214_49795319_49795972_49796084_49797021
ENSMUSG00000040260.9_49795288_49797334_1	chr17	-	455	3	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	8580	29897	8580	-8018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTCCTGATGCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	49797334	49795287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49795319_49795972_49796084_49797021
ENSMUSG00000040260.9_49797222_49805774_1	chr17	-	435	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	140	31831	140	-9952	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGCCGGGCACACGTC	NA	NA	NA	NA	NA	NA	NA	NA	49805774	49797221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49797356_49800848_49800944_49801402_49801478_49803152_49803243_49805733
ENSMUSG00000040260.9_49797280_49805824_1	chr17	-	427	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	90	31889	90	-10010	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAAGCCGCATCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	49805824	49797279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49797356_49800848_49800944_49801402_49801478_49803152_49803243_49805733
ENSMUSG00000040260.9_49797323_49805893_1	chr17	-	453	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	21	31932	21	-10053	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTCTGCTGAATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	49805893	49797322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_49797356_49800848_49800944_49801402_49801478_49803152_49803243_49805733
ENSMUSG00000040263.17_122523738_122531710_1	chr8	-	340	4	ISM	ENSMUSG00000040263.17	ENST00000622456.4	1088	10	24510	13	24509	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGAGGACAGCAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	122531710	122523737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_122523768_122526186_122526396_122527877_122527954_122531685
ENSMUSG00000040263.17_122526224_122531814_1	chr8	-	377	3	ISM	ENSMUSG00000040263.17	ENST00000622456.4	1088	10	24406	2499	24405	-2499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGCCAAGAGTCGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	122531814	122526223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_122526396_122527877_122527954_122531685
ENSMUSG00000040263.17_122526335_122533293_1	chr8	-	346	4	ISM	ENSMUSG00000040263.17	ENST00000622456.4	1088	10	22927	2610	22926	-2610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGGCTGTGGCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	122533293	122526334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_122526396_122527877_122527954_122531685_122531846_122533244
ENSMUSG00000040263.17_122531695_122546875_1	chr8	-	396	4	ISM	ENSMUSG00000040263.17	ENST00000622456.4	1088	10	9345	7970	9344	-7970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCAGGTAAGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	122546875	122531694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_122531846_122533244_122533338_122540445_122540583_122546860
ENSMUSG00000040263.17_122531783_122546912_1	chr8	-	345	4	ISM	ENSMUSG00000040263.17	ENST00000622456.4	1088	10	9308	8058	9307	-8058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCATCAGGCCCCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	122546912	122531782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_122531846_122533244_122533338_122540445_122540583_122546860
ENSMUSG00000040263.17_122533295_122548077_1	chr8	-	338	4	ISM	ENSMUSG00000040263.17	ENST00000622456.4	1088	10	8143	9570	8142	-9570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGAAGCGACAGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	122548077	122533294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_122533338_122540445_122540583_122546860_122546960_122548018
ENSMUSG00000040265.17_161818919_161838503_1	chr1	-	809	2	ISM	ENSMUSG00000040265.17	ENST00000355305.9	2996	21	466946	-343	284646	343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAAGCGTGAGGGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	161838503	161818918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_161819661_161838436
ENSMUSG00000040265.17_161819084_161839320_1	chr1	-	865	3	ISM	ENSMUSG00000040265.17	ENST00000355305.9	2996	21	466129	-178	283829	178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	161839320	161819083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_161819661_161838436_161838674_161839269
ENSMUSG00000040265.17_161819261_162183080_1	chr1	-	2706	19	NNC	ENSMUSG00000040265.17	novel	2996	21	NA	NA	-59875	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTTATGACGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	162183080	161819260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_161819661_161838436_161838674_161839269_161839497_161847396_161847562_161911601_161911714_161962025_161962136_162059222_162059337_162101188_162101219_162102056_162102109_162113565_162113637_162123120_162123208_162135436_162135571_162138956_162139029_162141129_162141266_162146149_162146293_162148520_162148682_162149255_162149355_162181088_162181293_162182928
ENSMUSG00000040265.17_161819261_162183080_2	chr1	-	2699	18	NNC	ENSMUSG00000040265.17	novel	4601	20	NA	NA	-59875	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTTATGACGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	162183080	161819260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_161819661_161838436_161838674_161839269_161839497_161847396_161847562_161911601_161911714_161962025_161962136_162059222_162059337_162102033_162102109_162113565_162113637_162123120_162123208_162135436_162135571_162138956_162139029_162141129_162141266_162146149_162146293_162148520_162148682_162149255_162149355_162181088_162181293_162182928
ENSMUSG00000040265.17_161819261_162183080_3	chr1	-	2707	19	ISM	ENSMUSG00000040265.17	ENST00000355305.9	2996	21	122369	-1	-59875	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTTATGACGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	162183080	161819260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_161819661_161838436_161838674_161839269_161839497_161847396_161847562_161911601_161911714_161962025_161962136_162059222_162059337_162101188_162101219_162102056_162102109_162113565_162113637_162123120_162123208_162135436_162135576_162138960_162139029_162141129_162141266_162146149_162146293_162148520_162148682_162149255_162149355_162181088_162181293_162182928
ENSMUSG00000040265.17_161819356_162234968_1	chr1	-	2668	19	NNC	ENSMUSG00000040265.17	novel	4601	20	NA	NA	70481	-94	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGTTTTATACAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	162234968	161819355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_161819661_161838436_161838674_161839269_161839497_161847396_161847562_161911601_161911714_161962025_161962136_162059222_162059337_162102033_162102109_162113565_162113637_162123120_162123208_162135436_162135576_162138960_162139029_162141129_162141266_162146149_162146293_162148520_162148682_162149255_162149355_162181088_162181293_162182928_162183079_162234903
ENSMUSG00000040265.17_161819396_162305270_1	chr1	-	2682	21	NNC	ENSMUSG00000040265.17	novel	2996	21	NA	NA	179	-134	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAACCTGTAGAGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	162305270	161819395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_161819661_161838436_161838674_161839269_161839497_161847396_161847562_161911601_161911714_161962025_161962136_162059222_162059337_162101188_162101219_162102056_162102109_162113565_162113637_162123120_162123208_162135436_162135571_162138956_162139029_162141129_162141266_162146149_162146293_162148520_162148682_162149255_162149355_162181088_162181293_162182928_162183079_162234903_162234978_162305231
ENSMUSG00000040265.17_161819419_162305274_1	chr1	-	2664	21	FSM	ENSMUSG00000040265.17	ENST00000355305.9	2996	21	175	157	175	-157	multi-exon	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGGTTTGACTCCGAAA	NA	NA	NA	NA	NA	NA	NA	NA	162305274	161819418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_161819661_161838436_161838674_161839269_161839497_161847396_161847562_161911601_161911714_161962025_161962136_162059222_162059337_162101188_162101219_162102056_162102109_162113565_162113637_162123120_162123208_162135436_162135576_162138960_162139029_162141129_162141266_162146149_162146293_162148520_162148682_162149255_162149355_162181088_162181293_162182928_162183079_162234903_162234978_162305231
ENSMUSG00000040265.17_161819458_162305328_1	chr1	-	2678	21	NNC	ENSMUSG00000040265.17	novel	2996	21	NA	NA	121	-196	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACCAACTCATCTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	162305328	161819457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_161819661_161838436_161838674_161839269_161839497_161847396_161847562_161911601_161911714_161962025_161962136_162059222_162059337_162101188_162101219_162102056_162102109_162113565_162113637_162123120_162123208_162135436_162135571_162138956_162139029_162141129_162141266_162146149_162146293_162148520_162148682_162149255_162149355_162181088_162181293_162182928_162183079_162234903_162234978_162305231
ENSMUSG00000040265.17_161819474_162305320_1	chr1	-	2655	21	FSM	ENSMUSG00000040265.17	ENST00000355305.9	2996	21	129	212	129	-212	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTTACTAATGTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	162305320	161819473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_161819661_161838436_161838674_161839269_161839497_161847396_161847562_161911601_161911714_161962025_161962136_162059222_162059337_162101188_162101219_162102056_162102109_162113565_162113637_162123120_162123208_162135436_162135576_162138960_162139029_162141129_162141266_162146149_162146293_162148520_162148682_162149255_162149355_162181088_162181293_162182928_162183079_162234903_162234978_162305231
ENSMUSG00000040265.17_161819474_162305339_1	chr1	-	2667	20	NNC	ENSMUSG00000040265.17	novel	4601	20	NA	NA	110	-212	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTTACTAATGTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	162305339	161819473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_161819661_161838436_161838674_161839269_161839497_161847396_161847562_161911601_161911714_161962025_161962136_162059222_162059337_162102033_162102109_162113565_162113637_162123120_162123208_162135436_162135576_162138960_162139029_162141129_162141266_162146149_162146293_162148520_162148682_162149255_162149355_162181088_162181293_162182928_162183079_162234903_162234978_162305231
ENSMUSG00000040265.17_161819494_162305380_1	chr1	-	2694	21	NNC	ENSMUSG00000040265.17	novel	2996	21	NA	NA	69	-232	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTCTATAGGCAAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	162305380	161819493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_161819661_161838436_161838674_161839269_161839497_161847396_161847562_161911601_161911714_161962025_161962136_162059222_162059337_162101188_162101219_162102056_162102109_162113565_162113637_162123120_162123208_162135437_162135576_162138960_162139029_162141129_162141266_162146149_162146293_162148520_162148682_162149255_162149355_162181088_162181293_162182928_162183079_162234903_162234978_162305231
ENSMUSG00000040265.17_161819531_162305379_1	chr1	-	2638	20	NNC	ENSMUSG00000040265.17	novel	4601	20	NA	NA	70	-269	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTTGCAGCTCAACCAT	NA	NA	NA	NA	NA	NA	NA	NA	162305379	161819530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_161819661_161838436_161838674_161839269_161839497_161847396_161847562_161911601_161911714_161962025_161962136_162059222_162059337_162102045_162102109_162113565_162113637_162123120_162123208_162135436_162135576_162138960_162139029_162141129_162141266_162146149_162146293_162148520_162148682_162149255_162149355_162181088_162181293_162182928_162183079_162234903_162234978_162305231
ENSMUSG00000040265.17_161819532_162305380_1	chr1	-	2657	21	FSM	ENSMUSG00000040265.17	ENST00000355305.9	2996	21	69	270	69	-270	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCTTTGCAGCTCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	162305380	161819531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_161819661_161838436_161838674_161839269_161839497_161847396_161847562_161911601_161911714_161962025_161962136_162059222_162059337_162101188_162101219_162102056_162102109_162113565_162113637_162123120_162123208_162135436_162135576_162138960_162139029_162141129_162141266_162146149_162146293_162148520_162148682_162149255_162149355_162181088_162181293_162182928_162183079_162234903_162234978_162305231
ENSMUSG00000040265.17_161819536_162305397_1	chr1	-	2663	20	NNC	ENSMUSG00000040265.17	novel	4601	20	NA	NA	52	-274	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGTAACCTTTGCAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	162305397	161819535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_161819661_161838436_161838674_161839269_161839497_161847396_161847562_161911601_161911714_161962025_161962136_162059222_162059337_162102033_162102109_162113565_162113637_162123120_162123208_162135436_162135576_162138960_162139029_162141129_162141266_162146149_162146293_162148520_162148682_162149255_162149355_162181088_162181293_162182928_162183079_162234903_162234978_162305231
ENSMUSG00000040265.17_161819558_162305389_1	chr1	-	2639	21	NNC	ENSMUSG00000040265.17	novel	2996	21	NA	NA	60	-296	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATGCAAACGCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	162305389	161819557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_161819661_161838436_161838674_161839269_161839497_161847396_161847562_161911601_161911714_161962025_161962136_162059222_162059337_162101188_162101219_162102056_162102109_162113565_162113637_162123120_162123208_162135436_162135571_162138956_162139029_162141129_162141266_162146149_162146293_162148520_162148682_162149255_162149355_162181088_162181293_162182928_162183079_162234903_162234978_162305231
ENSMUSG00000040265.17_161819574_162305429_1	chr1	-	2663	21	NNC	ENSMUSG00000040265.17	novel	2996	21	NA	NA	20	-312	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATTAACCACTAATGATT	NA	NA	NA	NA	NA	NA	NA	NA	162305429	161819573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_161819661_161838436_161838674_161839269_161839497_161847396_161847562_161911601_161911714_161962025_161962136_162059222_162059337_162101188_162101219_162102056_162102109_162113565_162113637_162123120_162123208_162135437_162135576_162138960_162139029_162141129_162141266_162146149_162146293_162148520_162148682_162149255_162149355_162181088_162181293_162182928_162183079_162234903_162234978_162305231
ENSMUSG00000040265.17_161911619_162141252_1	chr1	-	859	9	ISM	ENSMUSG00000040265.17	ENSMUST00000070330.14	4601	20	164351	93838	-18047	-77928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCAGATAAATCTGTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	162141252	161911618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_161911714_161962025_161962136_162059222_162059337_162102056_162102109_162113565_162113637_162123120_162123208_162135436_162135576_162138960_162139029_162141129
ENSMUSG00000040265.17_161962087_162146246_1	chr1	-	813	9	ISM	ENSMUSG00000040265.17	ENSMUST00000070330.14	4601	20	159357	144306	-23041	-128396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGAGAAGGGCTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	162146246	161962086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_161962136_162059222_162059337_162102056_162102109_162113565_162113637_162123120_162123208_162135436_162135576_162138960_162139029_162141129_162141266_162146149
ENSMUSG00000040268.18_130479569_130507156_1	chr7	+	697	9	ISM	ENSMUSG00000040268.18	ENST00000392799.7	1735	11	107	6218	107	-4395	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGACATCTCGGACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	130479568	130507156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120
ENSMUSG00000040268.18_130484082_130510105_1	chr7	+	687	9	ISM	ENSMUSG00000040268.18	ENST00000392799.7	1735	11	4620	3269	4620	-1446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGCGCCATCGTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	130484081	130510105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065
ENSMUSG00000040268.18_130493952_130512631_1	chr7	+	685	8	ISM	ENSMUSG00000040268.18	ENST00000392799.7	1735	11	14490	743	14490	-743	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCCAGCCTCTCGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	130493951	130512631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130512561
ENSMUSG00000040268.18_130502264_130512893_1	chr7	+	747	6	ISM	ENSMUSG00000040268.18	ENST00000392799.7	1735	11	22802	481	22802	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCGCCACTCACCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	130502263	130512893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130512561
ENSMUSG00000040268.18_130506634_130513010_1	chr7	+	634	4	ISM	ENSMUSG00000040268.18	ENST00000392799.7	1735	11	27172	364	27172	-364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGATTTAGGGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	130506633	130513010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130506665_130507120_130507185_130510065_130510156_130512561
ENSMUSG00000040268.18_130507170_130513161_1	chr7	+	705	3	ISM	ENSMUSG00000040268.18	ENST00000392799.7	1735	11	27708	213	27708	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAACAATTTAAAACATTAA	NA	NA	NA	NA	NA	NA	NA	NA	130507169	130513161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_130507185_130510065_130510156_130512561
ENSMUSG00000040269.6_8867327_8988738_1	chr3	-	422	3	FSM	ENSMUSG00000040269.6	ENSMUST00000042148.6	783	3	240	121	240	-121	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGCAACCCAGCAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	8988738	8867326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_8867475_8965045_8965228_8988646
ENSMUSG00000040269.6_8867388_8988784_1	chr3	-	407	3	FSM	ENSMUSG00000040269.6	ENSMUST00000042148.6	783	3	194	182	194	-182	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTGGAGGCTGATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	8988784	8867387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_8867475_8965045_8965228_8988646
ENSMUSG00000040274.12_3394510_3479087_1	chr5	+	323	3	ISM	ENSMUSG00000040274.12	ENSMUST00000042410.5	2470	7	198	93138	198	-93138	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGACAGATAAAGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	3394509	3479087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_3394600_3440680_3440817_3478990
ENSMUSG00000040287.10_127338560_127344556_1	chr10	+	1385	11	ISM	ENSMUSG00000040287.10	ENSMUST00000035839.3	1790	12	974	128	-92	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCGATTAGGCCCACACT	NA	NA	NA	NA	NA	NA	NA	NA	127338559	127344556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127338719_127338958_127339224_127339436_127339535_127339724_127339786_127340726_127340825_127343094_127343162_127343329_127343383_127343567_127343654_127343814_127343867_127343949_127344088_127344248
ENSMUSG00000040287.10_127338672_127340760_1	chr10	+	515	5	ISM	ENSMUSG00000040287.10	ENST00000332782.7	1302	11	20	3795	20	-3795	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGCGTCGGGGTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	127338671	127340760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127338719_127338958_127339224_127339436_127339535_127339724_127339796_127340726
ENSMUSG00000040287.10_127339147_127343608_1	chr10	+	505	7	ISM	ENSMUSG00000040287.10	ENST00000332782.7	1302	11	495	947	495	-947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTATCGGTTCAAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	127339146	127343608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127339224_127339436_127339535_127339724_127339796_127340726_127340825_127343094_127343162_127343329_127343383_127343567
ENSMUSG00000040287.10_127339500_127343992_1	chr10	+	505	8	ISM	ENSMUSG00000040287.10	ENST00000332782.7	1302	11	848	563	848	-563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCGGGTGCGGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	127339499	127343992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127339535_127339724_127339796_127340726_127340825_127343094_127343162_127343329_127343383_127343567_127343654_127343814_127343867_127343949
ENSMUSG00000040287.10_127340761_127344304_1	chr10	+	516	7	ISM	ENSMUSG00000040287.10	ENST00000332782.7	1302	11	2109	251	2109	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTGGGGCTGTTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	127340760	127344304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127340825_127343094_127343162_127343329_127343383_127343567_127343654_127343814_127343867_127343949_127344088_127344248
ENSMUSG00000040287.10_127340806_127344393_1	chr10	+	560	7	ISM	ENSMUSG00000040287.10	ENST00000332782.7	1302	11	2154	162	2154	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGCCCAGTGCGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	127340805	127344393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127340825_127343094_127343162_127343329_127343383_127343567_127343654_127343814_127343867_127343949_127344088_127344248
ENSMUSG00000040287.10_127343568_127344555_1	chr10	+	583	4	ISM	ENSMUSG00000040287.10	ENST00000332782.7	1302	11	4916	0	4916	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCGATTAGGCCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	127343567	127344555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127343654_127343814_127343867_127343949_127344088_127344248
ENSMUSG00000040296.16_40204849_40229590_1	chr4	-	3415	16	ISM	ENSMUSG00000040296.16	ENSMUST00000037907.13	3874	18	10238	0	5790	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCCAATTCATTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	40229590	40204848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398_40220504_40222034_40222198_40223797_40224057_40225039_40225194_40225597_40225706_40226596_40226720_40227965_40228114_40229494
ENSMUSG00000040296.16_40204973_40235349_1	chr4	-	3479	17	ISM	ENSMUSG00000040296.16	ENSMUST00000037907.13	3874	18	4479	124	31	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATGTAGACTATGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	40235349	40204972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398_40220504_40222034_40222198_40223797_40224057_40225039_40225194_40225597_40225706_40226596_40226720_40227965_40228114_40229494_40229677_40235247
ENSMUSG00000040296.16_40205181_40239700_1	chr4	-	3414	18	FSM	ENSMUSG00000040296.16	ENSMUST00000037907.13	3874	18	128	332	128	-332	multi-exon	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTAAAATGTAAAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	40239700	40205180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398_40220504_40222034_40222198_40223797_40224057_40225039_40225194_40225597_40225706_40226596_40226720_40227965_40228114_40229494_40229677_40235247_40235383_40239590
ENSMUSG00000040296.16_40205803_40211640_1	chr4	-	862	5	ISM	ENSMUSG00000040296.16	ENSMUST00000037907.13	3874	18	28188	954	23740	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCGTCTCGTGCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	40211640	40205802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549
ENSMUSG00000040296.16_40205947_40229555_1	chr4	-	779	6	NIC	ENSMUSG00000040296.16	novel	3874	18	NA	NA	5825	-144	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCGAGATTCCAGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	40229555	40205946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40229494
ENSMUSG00000040296.16_40206001_40229604_1	chr4	-	774	6	NIC	ENSMUSG00000040296.16	novel	3874	18	NA	NA	5776	-198	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCGCCAAACAGAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	40229604	40206000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40229494
ENSMUSG00000040296.16_40206055_40229658_1	chr4	-	774	6	NIC	ENSMUSG00000040296.16	novel	3874	18	NA	NA	5722	-252	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCACACCCTAAACCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	40229658	40206054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40229494
ENSMUSG00000040296.16_40206083_40235292_1	chr4	-	809	7	NIC	ENSMUSG00000040296.16	novel	3874	18	NA	NA	88	-280	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTTTTAAGGAGCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	40235292	40206082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40229494_40229677_40235247
ENSMUSG00000040296.16_40208447_40235329_1	chr4	-	826	6	ISM	ENSMUSG00000040296.16	ENST00000679859.1	1181	7	51	2644	51	-2644	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCCCTGGTGATTTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	40235329	40208446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40229494_40229677_40235247
ENSMUSG00000040312.15_35828073_35841893_1	chr17	+	2729	19	FSM	ENSMUSG00000040312.15	ENSMUST00000045956.14	2748	19	0	19	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCTGGAGATGTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	35828072	35841893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35828127_35828687_35828837_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ENSMUSG00000040312.15_35839789_35841118_1	chr17	+	251	3	ISM	ENSMUSG00000040312.15	ENST00000451521.6	1862	14	10400	0	10400	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAAGCCCGGAAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	35839788	35841118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35839864_35839941_35840044_35841044
ENSMUSG00000040322.11_109030478_109075773_1	chr3	+	3409	10	NNC	ENSMUSG00000040322.11	novel	3431	10	NA	NA	13	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1027	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTTTTCTAATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	109030477	109075773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_109030704_109043527_109043655_109056798_109056887_109062309_109062422_109064162_109064322_109065813_109065961_109066663_109066772_109068532_109068701_109070743_109070886_109073641
ENSMUSG00000040322.11_109030478_109075773_2	chr3	+	3411	10	NNC	ENSMUSG00000040322.11	novel	3431	10	NA	NA	13	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTTTTCTAATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	109030477	109075773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_109030704_109043527_109043655_109056798_109056887_109062309_109062422_109064162_109064322_109065813_109065961_109066663_109066772_109068532_109068694_109070734_109070886_109073641
ENSMUSG00000040322.11_109030478_109075773_3	chr3	+	3412	10	NNC	ENSMUSG00000040322.11	novel	3431	10	NA	NA	13	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	951	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTTTTCTAATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	109030477	109075773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_109030704_109043527_109043655_109056798_109056887_109062309_109062422_109064162_109064322_109065813_109065961_109066669_109066772_109068532_109068701_109070734_109070886_109073641
ENSMUSG00000040322.11_109030478_109075773_4	chr3	+	3409	10	NNC	ENSMUSG00000040322.11	novel	3431	10	NA	NA	13	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTTTTCTAATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	109030477	109075773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_109030704_109043527_109043655_109056798_109056887_109062309_109062422_109064162_109064322_109065813_109065961_109066663_109066772_109068532_109068701_109070734_109070886_109073650
ENSMUSG00000040322.11_109068552_109075269_1	chr3	+	1743	4	ISM	ENSMUSG00000040322.11	ENST00000370041.4	2914	10	25026	409	25026	-409	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGTGAAAATCTTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	109068551	109075269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_109068701_109070734_109070886_109073641_109075011_109075195
ENSMUSG00000040322.11_109068614_109075334_1	chr3	+	1746	4	ISM	ENSMUSG00000040322.11	ENST00000370041.4	2914	10	25088	344	25088	-344	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGTGTTTATGAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	109068613	109075334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_109068701_109070734_109070886_109073641_109075011_109075195
ENSMUSG00000040322.11_109070814_109075473_1	chr3	+	1719	3	ISM	ENSMUSG00000040322.11	ENST00000370041.4	2914	10	27288	205	27288	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTAGAATGACAATATTAA	NA	NA	NA	NA	NA	NA	NA	NA	109070813	109075473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_109070886_109073641_109075011_109075195
ENSMUSG00000040322.11_109073725_109075630_1	chr3	+	1721	2	ISM	ENSMUSG00000040322.11	ENST00000370041.4	2914	10	30199	48	30199	-48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATGTGTAAGGTATGAC	NA	NA	NA	NA	NA	NA	NA	NA	109073724	109075630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_109075011_109075195
ENSMUSG00000040322.11_109073794_109075773_1	chr3	+	1795	2	ISM	ENSMUSG00000040322.11	ENST00000370041.4	2914	10	30268	-95	30268	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTTTTCTAATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	109073793	109075773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_109075011_109075195
ENSMUSG00000040323.14_161553084_161554412_1	chr1	-	996	2	ISM	ENSMUSG00000040323.14	ENSMUST00000151268.2	798	3	646	-727	646	727	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAGAGAACACAGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	161554412	161553083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_161553876_161554208
ENSMUSG00000040327.17_46811542_46821903_1	chr17	-	2067	13	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	32808	-77	32808	-11	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTCCCAGGAGGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	46821903	46811541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46811805_46811928_46812007_46812678_46812813_46813055_46813174_46813310_46813422_46813538_46813614_46814014_46814109_46814397_46814562_46814681_46814847_46814959_46815101_46819192_46819539_46820727_46820979_46821776
ENSMUSG00000040327.17_46812726_46822476_1	chr17	-	1994	13	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	32235	1107	32235	-1107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGATCCAGGAGAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	46822476	46812725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46812813_46813055_46813174_46813310_46813422_46813538_46813614_46814014_46814109_46814397_46814562_46814681_46814847_46814959_46815101_46819192_46819539_46820727_46820979_46821776_46821977_46822126_46822257_46822364
ENSMUSG00000040327.17_46814491_46822420_1	chr17	-	1276	8	ISM	ENSMUSG00000040327.17	ENST00000372647.6	7487	40	32291	2872	32291	-2872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAGGCCCAGAGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	46822420	46814490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46814562_46814681_46814847_46814959_46815101_46819192_46819539_46820727_46820979_46821776_46821893_46822126_46822257_46822364
ENSMUSG00000040327.17_46815032_46830984_1	chr17	-	1292	8	ISM	ENSMUSG00000040327.17	ENST00000372647.6	7487	40	23727	3413	23727	-3413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACTGTCCTGCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	46830984	46815031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46815101_46819192_46819539_46820727_46820979_46821776_46821893_46822126_46822257_46822364_46822511_46830670_46830858_46830937
ENSMUSG00000040327.17_46819209_46831117_1	chr17	-	1340	7	ISM	ENSMUSG00000040327.17	ENST00000372647.6	7487	40	23594	7590	23594	-7590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGCTGCTGTAAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	46831117	46819208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46819539_46820727_46820979_46821776_46821893_46822126_46822257_46822364_46822511_46830670_46830858_46830937
ENSMUSG00000040327.17_46819384_46831497_1	chr17	-	1304	8	ISM	ENSMUSG00000040327.17	ENST00000372647.6	7487	40	23214	7765	23214	-7765	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTGGGGCACAGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	46831497	46819383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46819539_46820727_46820979_46821776_46821893_46822126_46822257_46822364_46822511_46830670_46830858_46830937_46831167_46831407
ENSMUSG00000040327.17_46819438_46831591_1	chr17	-	1344	8	ISM	ENSMUSG00000040327.17	ENST00000372647.6	7487	40	23120	7819	23120	-7819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGAGACGCTGAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	46831591	46819437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46819539_46820727_46820979_46821776_46821893_46822126_46822257_46822364_46822511_46830670_46830858_46830937_46831167_46831407
ENSMUSG00000040327.17_46819461_46832910_1	chr17	-	1995	12	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	21801	7842	21801	-7842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAGCAGACGGTGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	46832910	46819460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46819539_46820727_46820979_46821776_46821977_46822126_46822257_46822364_46822511_46830670_46830858_46830937_46831167_46831407_46831569_46831698_46831882_46831966_46832083_46832261_46832442_46832776
ENSMUSG00000040327.17_46820914_46832019_1	chr17	-	1270	9	ISM	ENSMUSG00000040327.17	ENST00000372647.6	7487	40	22692	9295	22692	-9295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTGCTCCAGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	46832019	46820913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46820979_46821776_46821893_46822126_46822257_46822364_46822511_46830670_46830858_46830937_46831167_46831407_46831569_46831698_46831882_46831966
ENSMUSG00000040327.17_46821826_46832321_1	chr17	-	1279	9	ISM	ENSMUSG00000040327.17	ENST00000372647.6	7487	40	22390	10207	22390	-10207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGCCCACAGGGAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	46832321	46821825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46821893_46822126_46822257_46822364_46822511_46830670_46830858_46830937_46831167_46831407_46831569_46831698_46831882_46831966_46832083_46832261
ENSMUSG00000040327.17_46821912_46836096_1	chr17	-	2014	14	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	18615	10293	18615	-10293	internal_fragment	TRUE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACGTATCTCAGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	46836096	46821911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46821977_46822126_46822257_46822364_46822511_46830670_46830858_46830937_46831167_46831407_46831569_46831698_46831882_46831966_46832083_46832261_46832442_46832776_46832911_46833045_46833222_46833440_46833537_46834181_46834288_46835991
ENSMUSG00000040327.17_46822127_46836372_1	chr17	-	2107	14	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	18339	10508	18339	-10508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAATCAGGGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	46836372	46822126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46822257_46822364_46822511_46830670_46830858_46830937_46831167_46831407_46831569_46831698_46831882_46831966_46832083_46832261_46832442_46832776_46832911_46833045_46833222_46833440_46833537_46834181_46834288_46835991_46836164_46836281
ENSMUSG00000040327.17_46822428_46836737_1	chr17	-	2018	14	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	17974	10809	17974	-10809	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGACCCTGCACGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	46836737	46822427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46822511_46830670_46830858_46830937_46831167_46831407_46831569_46831698_46831882_46831966_46832083_46832261_46832442_46832776_46832911_46833045_46833222_46833440_46833537_46834181_46834288_46835991_46836164_46836281_46836373_46836633
ENSMUSG00000040327.17_46830785_46837380_1	chr17	-	2021	14	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	17331	19166	17331	-19166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACCGCGCTGCTGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	46837380	46830784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46830858_46830937_46831167_46831407_46831569_46831698_46831882_46831966_46832083_46832261_46832442_46832776_46832911_46833045_46833222_46833440_46833537_46834181_46834288_46835991_46836164_46836281_46836373_46836633_46836862_46837304
ENSMUSG00000040327.17_46831472_46838914_1	chr17	-	2022	14	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	15797	19853	15797	-19853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAGAGCCCATCATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	46838914	46831471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46831569_46831698_46831882_46831966_46832083_46832261_46832442_46832776_46832911_46833045_46833222_46833440_46833537_46834181_46834288_46835991_46836164_46836281_46836373_46836633_46836862_46837304_46837411_46837487_46837735_46838824
ENSMUSG00000040327.17_46831532_46838973_1	chr17	-	2021	14	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	15738	19913	15738	-19913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACGGTGGTTTGCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	46838973	46831531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46831569_46831698_46831882_46831966_46832083_46832261_46832442_46832776_46832911_46833045_46833222_46833440_46833537_46834181_46834288_46835991_46836164_46836281_46836373_46836633_46836862_46837304_46837411_46837487_46837735_46838824
ENSMUSG00000040327.17_46832291_46840968_1	chr17	-	2016	13	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	13743	20672	13743	-20672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTCCTGAGCCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	46840968	46832290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46832442_46832776_46832911_46833045_46833222_46833440_46833537_46834181_46834288_46835991_46836164_46836281_46836373_46836633_46836862_46837304_46837411_46837487_46837735_46838824_46839043_46839385_46839583_46840874
ENSMUSG00000040327.17_46832344_46841016_1	chr17	-	2011	13	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	13695	20725	13695	-20725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAAGTTCGGCGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46841016	46832343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46832442_46832776_46832911_46833045_46833222_46833440_46833537_46834181_46834288_46835991_46836164_46836281_46836373_46836633_46836862_46837304_46837411_46837487_46837735_46838824_46839043_46839385_46839583_46840874
ENSMUSG00000040327.17_46832810_46848742_1	chr17	-	2140	13	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	5969	21191	5969	-21191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCCCTGGTGCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	46848742	46832809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46832911_46833045_46833222_46833440_46833537_46834181_46834288_46835991_46836164_46836281_46836373_46836633_46836862_46837304_46837411_46837487_46837735_46838824_46839043_46839385_46839583_46840874_46841083_46848548
ENSMUSG00000040327.17_46833477_46849338_1	chr17	-	2014	12	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	5373	21858	5373	-21858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATCATCCAAATCCGAAT	NA	NA	NA	NA	NA	NA	NA	NA	46849338	46833476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46833537_46834181_46834288_46835991_46836164_46836281_46836373_46836633_46836862_46837304_46837411_46837487_46837735_46838824_46839043_46839385_46839583_46840874_46841083_46848548_46848742_46849150
ENSMUSG00000040327.17_46835991_46849516_1	chr17	-	2027	10	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	5195	24372	5195	-24372	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAACCCATTTGTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	46849516	46835990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46836164_46836281_46836373_46836633_46836862_46837304_46837411_46837487_46837735_46838824_46839043_46839385_46839583_46840874_46841083_46848548_46848742_46849150
ENSMUSG00000040327.17_46836093_46849938_1	chr17	-	2043	11	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	4773	24474	4773	-24474	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAGCTGACGGACCGCAA	NA	NA	NA	NA	NA	NA	NA	NA	46849938	46836092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46836164_46836281_46836373_46836633_46836862_46837304_46837411_46837487_46837735_46838824_46839043_46839385_46839583_46840874_46841083_46848548_46848742_46849150_46849554_46849857
ENSMUSG00000040327.17_46836667_46850261_1	chr17	-	2050	10	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	4450	25048	4450	-25048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCTCGAGCATCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	46850261	46836666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46836862_46837304_46837411_46837487_46837735_46838824_46839043_46839385_46839583_46840874_46841083_46848548_46848742_46849150_46849554_46849857_46850058_46850178
ENSMUSG00000040327.17_46837516_46851438_1	chr17	-	2048	9	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	3273	25897	3273	-25897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAACTCTGCTGCTCACG	NA	NA	NA	NA	NA	NA	NA	NA	46851438	46837515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46837735_46838824_46839043_46839385_46839583_46840874_46841083_46848548_46848742_46849150_46849554_46849857_46850058_46850178_46850315_46851164
ENSMUSG00000040327.17_46837591_46851519_1	chr17	-	2054	9	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	3192	25972	3192	-25972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCTCAGGCGCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	46851519	46837590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46837735_46838824_46839043_46839385_46839583_46840874_46841083_46848548_46848742_46849150_46849554_46849857_46850058_46850178_46850315_46851164
ENSMUSG00000040327.17_46838960_46852725_1	chr17	-	2039	9	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	1986	27341	1986	-27341	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGGAGCTGAGAGACACC	NA	NA	NA	NA	NA	NA	NA	NA	46852725	46838959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46839043_46839385_46839583_46840874_46841083_46848548_46848742_46849150_46849554_46849857_46850058_46850178_46850315_46851164_46851669_46852610
ENSMUSG00000040327.17_46839457_46854182_1	chr17	-	2002	9	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	529	27838	529	-27838	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGCCCAGGCTCCGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	46854182	46839456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46839583_46840874_46841083_46848548_46848742_46849150_46849554_46849857_46850058_46850178_46850315_46851164_46851669_46852610_46852766_46854105
ENSMUSG00000040327.17_46839516_46854240_1	chr17	-	2001	9	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	471	27897	471	-27897	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAACCTCTGTTTGATACC	NA	NA	NA	NA	NA	NA	NA	NA	46854240	46839515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46839583_46840874_46841083_46848548_46848742_46849150_46849554_46849857_46850058_46850178_46850315_46851164_46851669_46852610_46852766_46854105
ENSMUSG00000040327.17_46840989_46854453_1	chr17	-	2033	8	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	258	29370	258	-29370	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACCAAGCATGAATGGCG	NA	NA	NA	NA	NA	NA	NA	NA	46854453	46840988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46841083_46848548_46848742_46849150_46849554_46849857_46850058_46850178_46850315_46851164_46851669_46852610_46852766_46854105
ENSMUSG00000040327.17_46848666_46854653_1	chr17	-	2022	7	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	58	37047	58	-37047	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATCTCCAGCCTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	46854653	46848665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46848742_46849150_46849554_46849857_46850058_46850178_46850315_46851164_46851669_46852610_46852766_46854105
ENSMUSG00000040329.15_7638994_7678787_1	chr3	-	784	4	NNC	ENSMUSG00000040329.15	novel	4858	5	NA	NA	0	-86	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1791	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGAACAGAAAAAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	7678787	7638993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_7639008_7642233_7642315_7669092_7669225_7678230
ENSMUSG00000040329.15_7638994_7678787_2	chr3	-	778	4	NNC	ENSMUSG00000040329.15	novel	4858	5	NA	NA	0	-86	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGAACAGAAAAAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	7678787	7638993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_7639008_7642233_7642315_7669090_7669225_7678238
ENSMUSG00000040329.15_7638994_7678787_3	chr3	-	786	4	FSM	ENSMUSG00000040329.15	ENST00000379113.6	849	4	-23	86	0	-86	multi-exon	FALSE	canonical	NA	NA	NA	NA	2002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGAACAGAAAAAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	7678787	7638993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_7639008_7642233_7642315_7669090_7669225_7678230
ENSMUSG00000040331.17_130134263_130148744_1	chr7	-	1061	11	FSM	ENSMUSG00000040331.17	ENSMUST00000160289.9	1435	11	367	7	367	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTCACAACGTGATCGTT	NA	NA	NA	NA	NA	NA	NA	NA	130148744	130134262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
ENSMUSG00000040331.17_130135372_130148872_1	chr7	-	964	10	ISM	ENSMUSG00000040331.17	ENSMUST00000160289.9	1435	11	239	1116	239	-1116	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGCCTGTGATCCCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	130148872	130135371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
ENSMUSG00000040351.12_3742180_3743789_1	chr5	-	1335	2	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	109190	1763	109136	-1763	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCCAAACTCTGACTCG	NA	NA	NA	NA	NA	NA	NA	NA	3743789	3742179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3743497_3743771
ENSMUSG00000040351.12_3742301_3744815_1	chr5	-	1367	3	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	108164	1884	108110	-1884	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCCAAGCAGTTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	3744815	3742300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3743497_3743771_3743906_3744778
ENSMUSG00000040351.12_3742482_3751869_1	chr5	-	1381	5	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	101110	2065	101056	-2065	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTCTAGCCTGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	3751869	3742481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804
ENSMUSG00000040351.12_3742516_3751908_1	chr5	-	1386	5	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	101071	2099	101017	-2099	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGCTGCCACCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	3751908	3742515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804
ENSMUSG00000040351.12_3742686_3752950_1	chr5	-	1350	6	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	100029	2269	99975	-2269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATGCACTTAATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	3752950	3742685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891
ENSMUSG00000040351.12_3742991_3756269_1	chr5	-	1367	9	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	96710	2574	96656	-2574	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGGAACTCGTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	3756269	3742990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188
ENSMUSG00000040351.12_3743117_3763158_1	chr5	-	1346	10	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	89821	2700	89767	-2700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATTATGGCTTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	3763158	3743116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107
ENSMUSG00000040351.12_3743253_3772621_1	chr5	-	1366	11	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	80358	2836	80304	-2836	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGACAGTGACCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	3772621	3743252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545
ENSMUSG00000040351.12_3744801_3782593_1	chr5	-	1345	12	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	70386	4384	70332	-4384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCAAGCGAAAGCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	3782593	3744800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539
ENSMUSG00000040351.12_3750388_3784070_1	chr5	-	1350	12	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	68909	9971	68855	-9971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGGAATATTTAGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	3784070	3750387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975
ENSMUSG00000040351.12_3752981_3805688_1	chr5	-	1389	12	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	47291	12564	47237	-12564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCGGCGCATCCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	3805688	3752980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593
ENSMUSG00000040351.12_3756188_3819545_1	chr5	-	1384	10	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	33434	15771	33380	-15771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACCTGCCTAACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	3819545	3756187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428
ENSMUSG00000040351.12_3756265_3819587_1	chr5	-	1349	10	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	33392	15848	33338	-15848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGTTACTACAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	3819587	3756264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428
ENSMUSG00000040351.12_3763142_3819698_1	chr5	-	1367	9	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	33281	22725	33227	-22725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGAAGGCTGTAATCACA	NA	NA	NA	NA	NA	NA	NA	NA	3819698	3763141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428
ENSMUSG00000040351.12_3772551_3822613_1	chr5	-	1393	9	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	30366	32134	30312	-32134	internal_fragment	TRUE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACGTGAGTGGAATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	3822613	3772550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516
ENSMUSG00000040351.12_3777575_3822738_1	chr5	-	1348	8	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	30241	37158	30187	-37158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATCCATCTGGGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	3822738	3777574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516
ENSMUSG00000040351.12_3779666_3852686_1	chr5	-	1375	8	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	293	39249	239	-39249	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAAACGATACCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3852686	3779665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ENSMUSG00000040351.12_3779731_3852787_1	chr5	-	1411	8	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	192	39314	138	-39314	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCATATGAATGCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	3852787	3779730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ENSMUSG00000040351.12_3784048_3852931_1	chr5	-	1345	6	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	48	43631	-6	-43631	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTACAAGATCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	3852931	3784047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ENSMUSG00000040354.15_127132095_127144233_1	chr10	-	2108	15	ISM	ENSMUSG00000040354.15	ENST00000628866.2	2553	19	3265	-13	3265	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	931	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGAGCCCTCTCCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	127144233	127132094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126
ENSMUSG00000040354.15_127132218_127144460_1	chr10	-	2076	16	ISM	ENSMUSG00000040354.15	ENST00000628866.2	2553	19	3038	110	3038	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTGGCTGAGGGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	127144460	127132217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369
ENSMUSG00000040354.15_127133348_127147414_1	chr10	-	2089	16	ISM	ENSMUSG00000040354.15	ENST00000628866.2	2553	19	84	1240	84	-1240	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	751	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAATTGGCACAGTAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	127147414	127133347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127146088_127146168_127146312_127146404_127147389
ENSMUSG00000040354.15_127133417_127147547_1	chr10	-	2153	16	ISM	ENSMUSG00000040354.15	ENST00000628866.2	2553	19	-49	1309	-49	-1309	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGCTCCCACCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	127147547	127133416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127146088_127146168_127146312_127146404_127147389
ENSMUSG00000040354.15_127144473_127145951_1	chr10	-	231	3	ISM	ENSMUSG00000040354.15	ENSMUST00000171564.8	2962	22	1704	12382	1547	-12365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAAACAGCAGGGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	127145951	127144472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127144549_127144776_127144853_127145872
ENSMUSG00000040354.15_127144522_127146007_1	chr10	-	238	3	ISM	ENSMUSG00000040354.15	ENSMUST00000171564.8	2962	22	1648	12431	1491	-12414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGACACTGAGTACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	127146007	127144521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127144549_127144776_127144853_127145872
ENSMUSG00000040356.17_35058220_35061015_1	chr17	-	1661	10	ISM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	8171	0	8171	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTGGAGTATGGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	35061015	35058219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919
ENSMUSG00000040356.17_35058412_35061963_1	chr17	-	1687	11	ISM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	7223	192	7223	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTTCGCAGCCAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	35061963	35058411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787
ENSMUSG00000040356.17_35058743_35063682_1	chr17	-	1699	12	ISM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	5504	523	5504	-523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACAGTGGAGGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	35063682	35058742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590
ENSMUSG00000040356.17_35059127_35064143_1	chr17	-	1765	12	ISM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	5043	907	5043	-907	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATGAGCAGCCATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	35064143	35059126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979
ENSMUSG00000040356.17_35059322_35064231_1	chr17	-	1671	12	ISM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	4955	1102	4955	-1102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACCAGTCGCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	35064231	35059321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143
ENSMUSG00000040356.17_35059578_35064856_1	chr17	-	1737	13	ISM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	4330	1358	4330	-1358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGTGGTAGAAGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	35064856	35059577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803
ENSMUSG00000040356.17_35059871_35065084_1	chr17	-	1695	13	ISM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	4102	1651	4102	-1651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGACTTTAGCAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	35065084	35059870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002
ENSMUSG00000040356.17_35060118_35065615_1	chr17	-	1714	13	ISM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	3571	1898	3571	-1898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAAGGGGCCAGCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	35065615	35060117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497
ENSMUSG00000040356.17_35060449_35065905_1	chr17	-	1697	13	ISM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	3281	2229	3281	-2229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCACAATGCACTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	35065905	35060448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842
ENSMUSG00000040356.17_35060714_35066169_1	chr17	-	1673	13	ISM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	3017	2494	3017	-2494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCTGACCTACCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	35066169	35060713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118
ENSMUSG00000040356.17_35061858_35066896_1	chr17	-	1671	14	ISM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	2290	3638	2290	-3638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGGCACCGTCATCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	35066896	35061857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879
ENSMUSG00000040356.17_35061911_35066948_1	chr17	-	1670	14	ISM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	2238	3691	2238	-3691	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGGGAGTACGTGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	35066948	35061910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879
ENSMUSG00000040356.17_35061982_35066994_1	chr17	-	1645	14	ISM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	2192	3762	2192	-3762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCCAGCCAGGACGGTG	NA	NA	NA	NA	NA	NA	NA	NA	35066994	35061981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879
ENSMUSG00000040356.17_35063343_35067156_1	chr17	-	1652	14	ISM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	2030	5123	2030	-5123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTTTCAGCAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	35067156	35063342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083
ENSMUSG00000040356.17_35063717_35068945_1	chr17	-	1673	15	ISM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	241	5497	241	-5497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGAGCAGGCTTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	35068945	35063716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871
ENSMUSG00000040363.16_11903405_11905204_1	chrX	-	852	2	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	22642	425	22642	-423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTTTTGTTTACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	11905204	11903404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11904157_11905104
ENSMUSG00000040363.16_11903831_11907819_1	chrX	-	832	5	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	20027	851	20027	34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATAGTGTTAATCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	11907819	11903830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11904157_11905104_11905308_11905488_11905567_11906623_11906770_11907740
ENSMUSG00000040363.16_11903865_11913987_1	chrX	-	1424	7	ISM	ENSMUSG00000040363.16	ENST00000406200.4	5368	15	32826	0	13859	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCTGCCCCGCCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	11913987	11903864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661
ENSMUSG00000040363.16_11903983_11914581_1	chrX	-	1346	8	ISM	ENSMUSG00000040363.16	ENST00000406200.4	5368	15	32232	118	13265	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGAAAGCAAGGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	11914581	11903982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541
ENSMUSG00000040363.16_11904032_11914635_1	chrX	-	1351	8	ISM	ENSMUSG00000040363.16	ENST00000406200.4	5368	15	32178	167	13211	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAACAAGTCTCTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	11914635	11904031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541
ENSMUSG00000040363.16_11904065_11914706_1	chrX	-	1389	8	ISM	ENSMUSG00000040363.16	ENST00000406200.4	5368	15	32107	200	13140	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCATTGCAGAGGCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	11914706	11904064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541
ENSMUSG00000040363.16_11904070_11913242_1	chrX	-	829	6	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	14604	1090	14604	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCACCATTGCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	11913242	11904069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11904157_11905104_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094
ENSMUSG00000040363.16_11905243_11914846_1	chrX	-	1345	7	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	13000	2263	13000	-1378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGGATACCTATAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	11914846	11905242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541
ENSMUSG00000040363.16_11905524_11915294_1	chrX	-	1346	7	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	12552	2544	12552	-1659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGCTTGGGAGTTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	11915294	11905523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233
ENSMUSG00000040363.16_11907777_11921229_1	chrX	-	1340	6	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	6617	4797	6617	-3912	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGATGTCAACTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	11921229	11907776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207
ENSMUSG00000040363.16_11907822_11921287_1	chrX	-	1353	6	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	6559	4842	6559	-3957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCAGGGGATGGCTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	11921287	11907821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207
ENSMUSG00000040363.16_11907876_11921342_1	chrX	-	1354	6	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	6504	4896	6504	-4011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGATGTCAATCATCGAG	NA	NA	NA	NA	NA	NA	NA	NA	11921342	11907875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207
ENSMUSG00000040363.16_11913094_11921931_1	chrX	-	1429	6	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	5915	10114	5915	-9229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTATACTTGTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	11921931	11913093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877
ENSMUSG00000040363.16_11913205_11922600_1	chrX	-	1336	7	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	5246	10225	5246	-9340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGAGACCACCCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	11922600	11913204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582
ENSMUSG00000040363.16_11913259_11922658_1	chrX	-	1340	7	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	5188	10279	5188	-9394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACAATTGCTACCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	11922658	11913258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582
ENSMUSG00000040363.16_11913313_11922712_1	chrX	-	1340	7	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	5134	10333	5134	-9448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGACTACGATTTGTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	11922712	11913312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582
ENSMUSG00000040363.16_11913893_11922990_1	chrX	-	1347	6	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	4856	10913	4856	-10028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGCTGCCTGCCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	11922990	11913892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582
ENSMUSG00000040363.16_11914587_11923134_1	chrX	-	1351	5	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	4712	11607	4712	-10722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTGGTCTGAAGAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	11923134	11914586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582
ENSMUSG00000040363.16_11914649_11923183_1	chrX	-	1338	5	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	4663	11669	4663	-10784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGGGACTAACATCACTG	NA	NA	NA	NA	NA	NA	NA	NA	11923183	11914648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582
ENSMUSG00000040363.16_11914796_11923327_1	chrX	-	1335	5	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	4519	11816	4519	-10931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTAACAGGGCTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	11923327	11914795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582
ENSMUSG00000040363.16_11915353_11923541_1	chrX	-	1339	4	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	4305	12373	4305	-11488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACCCTCCGGCTAGACA	NA	NA	NA	NA	NA	NA	NA	NA	11923541	11915352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11915492_11921207_11921395_11921877_11921932_11922582
ENSMUSG00000040363.16_11921251_11923714_1	chrX	-	1330	3	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	4132	18271	4132	-17386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGGAAGAGGCCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	11923714	11921250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11921395_11921877_11921932_11922582
ENSMUSG00000040363.16_11921296_11923778_1	chrX	-	1349	3	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	4068	18316	4068	-17431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGAAAGGTTGAAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	11923778	11921295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11921395_11921877_11921932_11922582
ENSMUSG00000040363.16_11921348_11923831_1	chrX	-	1350	3	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	4015	18368	4015	-17483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCCACCCAGCAACCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	11923831	11921347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11921395_11921877_11921932_11922582
ENSMUSG00000040363.16_11924195_11927785_1	chrX	-	1339	3	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	61	21215	61	-20330	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGTCGGGCTGCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	11927785	11924194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11925430_11926368_11926448_11927760
ENSMUSG00000040363.16_11924241_11927847_1	chrX	-	1355	3	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	-1	21261	-1	-20376	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCAAAGGTGACCACATG	NA	NA	NA	NA	NA	NA	NA	NA	11927847	11924240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_11925430_11926368_11926448_11927760
ENSMUSG00000040374.14_5626205_5628249_1	chr3	-	641	2	ISM	ENSMUSG00000040374.14	ENSMUST00000195855.6	1587	4	12956	645	540	-641	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTCTGATTTTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	5628249	5626204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_5626821_5628224
ENSMUSG00000040374.14_5626253_5628307_1	chr3	-	651	2	ISM	ENSMUSG00000040374.14	ENSMUST00000195855.6	1587	4	12898	693	482	-689	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCTTTGAGTACATGAA	NA	NA	NA	NA	NA	NA	NA	NA	5628307	5626252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_5626821_5628224
ENSMUSG00000040374.14_5626451_5641188_1	chr3	-	679	4	FSM	ENSMUSG00000040374.14	ENSMUST00000195855.6	1587	4	17	891	0	-887	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATGATTTGTTTCGAAA	NA	NA	NA	NA	NA	NA	NA	NA	5641188	5626450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_5626821_5628224_5628333_5628679_5628790_5641097
ENSMUSG00000040380.15_56120271_56121050_1	chr14	-	491	2	ISM	ENSMUSG00000040380.15	ENSMUST00000172378.2	1438	4	639	753	639	1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGAACCTCTAGACAAAACG	NA	NA	NA	NA	NA	NA	NA	NA	56121050	56120270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_56120635_56120923
ENSMUSG00000040385.8_4242064_4243256_1	chr19	+	575	3	ISM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	0	2163	0	-2144	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1548	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGAATGTTGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	4242063	4243256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4242271_4242743_4242876_4243020
ENSMUSG00000040385.8_4242172_4243870_1	chr19	+	567	4	ISM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	108	1549	-38	-1530	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1929	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGAGTGGTTGTGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	4242171	4243870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765
ENSMUSG00000040385.8_4242742_4244485_1	chr19	+	490	4	ISM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	678	934	532	-915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	990	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGGAGCAGATTAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	4242741	4244485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4242876_4243020_4243252_4243765_4243871_4244465
ENSMUSG00000040385.8_4242787_4244541_1	chr19	+	501	4	ISM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	723	878	577	-859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGATCTCCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	4242786	4244541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4242876_4243020_4243252_4243765_4243871_4244465
ENSMUSG00000040385.8_4242834_4244595_1	chr19	+	508	4	ISM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	770	824	624	-805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1446	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGACCGTGGTGTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4242833	4244595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4242876_4243020_4243252_4243765_4243871_4244465
ENSMUSG00000040385.8_4243129_4244902_1	chr19	+	584	4	ISM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	1065	517	919	-498	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2728	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGGGTGTGGGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	4243128	4244902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4243252_4243765_4243871_4244465_4244690_4244770
ENSMUSG00000040385.8_4243220_4245039_1	chr19	+	555	5	ISM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	1156	380	1010	-361	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGGCCGGCCCATCACTC	NA	NA	NA	NA	NA	NA	NA	NA	4243219	4245039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
ENSMUSG00000040385.8_4244493_4245185_1	chr19	+	537	3	ISM	ENSMUSG00000040385.8	ENST00000527663.6	1203	6	2283	215	2283	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAGCGTTAAGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	4244492	4245185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4244690_4244770_4244906_4244980
ENSMUSG00000040385.8_4244768_4245419_1	chr19	+	577	2	ISM	ENSMUSG00000040385.8	ENST00000527663.6	1203	6	2558	-19	2558	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATAGCCTCTGTCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	4244767	4245419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4244906_4244980
ENSMUSG00000040387.17_24617375_24626986_1	chr4	-	262	2	ISM	ENSMUSG00000040387.17	ENST00000620278.1	2266	8	116981	1155	116981	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACAGGAGACCGAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	24626986	24617374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_24617547_24626896
ENSMUSG00000040387.17_24617420_24649573_1	chr4	-	507	5	ISM	ENSMUSG00000040387.17	ENST00000369261.9	3006	9	143226	1200	94394	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGTGCCTCACCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	24649573	24617419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_24617547_24626896_24626987_24629155_24629353_24632642_24632702_24649539
ENSMUSG00000040387.17_24617504_24649605_1	chr4	-	455	5	ISM	ENSMUSG00000040387.17	ENST00000369261.9	3006	9	143194	1284	94362	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTACACTGCCCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	24649605	24617503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_24617547_24626896_24626987_24629155_24629353_24632642_24632702_24649539
ENSMUSG00000040387.17_24626968_24649750_1	chr4	-	486	4	ISM	ENSMUSG00000040387.17	ENST00000369261.9	3006	9	143049	10748	94217	-9695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATAATGGGAGAATATAT	NA	NA	NA	NA	NA	NA	NA	NA	24649750	24626967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_24626987_24629155_24629353_24632642_24632702_24649539
ENSMUSG00000040387.17_24629225_24649871_1	chr4	-	519	3	ISM	ENSMUSG00000040387.17	ENST00000369261.9	3006	9	142928	13005	94096	-11952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATAGATTCTTACAACA	NA	NA	NA	NA	NA	NA	NA	NA	24649871	24629224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_24629353_24632642_24632702_24649539
ENSMUSG00000040387.17_24629282_24682133_1	chr4	-	209	3	ISM	ENSMUSG00000040387.17	ENST00000620278.1	2266	8	61834	13062	61834	-12009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTATGTGCTTGGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	24682133	24629281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_24629353_24632642_24632702_24682054
ENSMUSG00000040387.17_24629336_24682184_1	chr4	-	206	3	ISM	ENSMUSG00000040387.17	ENST00000620278.1	2266	8	61783	13116	61783	-12063	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCCCATGCTACAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	24682184	24629335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_24629353_24632642_24632702_24682054
ENSMUSG00000040387.17_24650091_24792689_1	chr4	-	465	3	ISM	ENSMUSG00000040387.17	ENST00000539200.5	2799	7	110	33871	110	-32818	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGCATCTATGCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	24792689	24650090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_24650267_24682054_24682271_24792616
ENSMUSG00000040387.17_24650151_24792738_1	chr4	-	454	3	ISM	ENSMUSG00000040387.17	ENST00000539200.5	2799	7	61	33931	61	-32878	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCTGGTGCAGGCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	24792738	24650150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_24650267_24682054_24682271_24792616
ENSMUSG00000040387.17_24650206_24792796_1	chr4	-	457	3	ISM	ENSMUSG00000040387.17	ENST00000539200.5	2799	7	3	33986	3	-32933	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCGCTTTGGCCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	24792796	24650205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_24650267_24682054_24682271_24792616
ENSMUSG00000040387.17_24682055_24709051_1	chr4	-	315	2	ISM	ENSMUSG00000040387.17	ENST00000620278.1	2266	8	34916	65835	34916	-64782	internal_fragment	TRUE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGACATGGTGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	24709051	24682054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_24682271_24708952
ENSMUSG00000040387.17_24682203_24711502_1	chr4	-	222	3	ISM	ENSMUSG00000040387.17	ENST00000620278.1	2266	8	32465	65983	32465	-64930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCAGTGATTGACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	24711502	24682202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_24682271_24708952_24709052_24711447
ENSMUSG00000040387.17_24708978_24792733_1	chr4	-	299	3	ISM	ENSMUSG00000040387.17	ENST00000369261.9	3006	9	66	92758	66	-91705	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTCCCACTATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	24792733	24708977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_24709052_24743857_24743966_24792616
ENSMUSG00000040387.17_24708991_24792723_1	chr4	-	168	2	ISM	ENSMUSG00000040387.17	ENST00000536676.5	2898	8	76	92771	76	-91718	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTTCTCAATCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	24792723	24708990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_24709052_24792616
ENSMUSG00000040389.16_108498705_108540534_1	chr3	+	2059	9	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	-21	12496	-21	-12496	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAGCAGCTGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	108498704	108540534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108498914_108517192_108517360_108521648_108521734_108525805_108526609_108530641_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376
ENSMUSG00000040389.16_108498829_108518741_1	chr3	+	318	3	NNC	ENSMUSG00000040389.16	novel	4083	15	NA	NA	103	-34289	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTGACAAAAAAAGGTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	108498828	108518741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_108498914_108517192_108517360_108518675
ENSMUSG00000040389.16_108517191_108544412_1	chr3	+	1958	9	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	18465	8618	18465	-8618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGGATCAAATGACAAATA	NA	NA	NA	NA	NA	NA	NA	NA	108517190	108544412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108517360_108521648_108521734_108525805_108526609_108530641_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306
ENSMUSG00000040389.16_108517299_108525869_1	chr3	+	290	4	NNC	ENSMUSG00000040389.16	novel	4222	15	NA	NA	18573	-27161	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACGATTACAGCAAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	108517298	108525869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_108517360_108518675_108518756_108521648_108521734_108525805
ENSMUSG00000040389.16_108517314_108545253_1	chr3	+	1944	10	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	18588	7777	18588	-7777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATTTATGGAAGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	108517313	108545253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108517360_108521648_108521734_108525805_108526609_108530641_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208
ENSMUSG00000040389.16_108521647_108545238_1	chr3	+	1888	9	ISM	ENSMUSG00000040389.16	ENSMUST00000051145.15	4222	15	23052	7797	22921	-7792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAATTCGAGATTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	108521646	108545238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108521734_108525805_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208
ENSMUSG00000040389.16_108525841_108545966_1	chr3	+	1932	9	ISM	ENSMUSG00000040389.16	ENSMUST00000051145.15	4222	15	27246	7069	27115	-7064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGGTGGATGATTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	108525840	108545966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941
ENSMUSG00000040389.16_108525909_108546019_1	chr3	+	1917	9	ISM	ENSMUSG00000040389.16	ENSMUST00000051145.15	4222	15	27314	7016	27183	-7011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCGTGTACCAAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	108525908	108546019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941
ENSMUSG00000040389.16_108525966_108546073_1	chr3	+	1914	9	ISM	ENSMUSG00000040389.16	ENSMUST00000051145.15	4222	15	27371	6962	27240	-6957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTTCCATAGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	108525965	108546073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941
ENSMUSG00000040389.16_108526169_108551843_1	chr3	+	2012	11	ISM	ENSMUSG00000040389.16	ENSMUST00000051145.15	4222	15	27574	1192	27443	-1187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCCTTCCTCTCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	108526168	108551843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ENSMUSG00000040389.16_108526550_108552064_1	chr3	+	1852	11	ISM	ENSMUSG00000040389.16	ENSMUST00000051145.15	4222	15	27955	971	27824	-966	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTCTTCCATGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	108526549	108552064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ENSMUSG00000040389.16_108526550_108552123_1	chr3	+	1911	11	ISM	ENSMUSG00000040389.16	ENSMUST00000051145.15	4222	15	27955	912	27824	-907	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCTTATGTTGTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	108526549	108552123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ENSMUSG00000040389.16_108530665_108552241_1	chr3	+	1944	10	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	31939	789	31939	-789	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTAAGTAATTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	108530664	108552241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ENSMUSG00000040389.16_108530665_108552311_1	chr3	+	2014	10	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	31939	719	31939	-719	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGCTCTTGTCACGAT	NA	NA	NA	NA	NA	NA	NA	NA	108530664	108552311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ENSMUSG00000040389.16_108531973_108552437_1	chr3	+	1939	9	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	33247	593	33247	-593	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTCTTCCTCTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	108531972	108552437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ENSMUSG00000040389.16_108532030_108552489_1	chr3	+	1934	9	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	33304	541	33304	-541	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTTCAGGCTAAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	108532029	108552489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ENSMUSG00000040389.16_108534616_108552597_1	chr3	+	1923	8	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	35890	433	35890	-433	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGCAGCTGTTACGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	108534615	108552597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ENSMUSG00000040389.16_108534684_108552670_1	chr3	+	1928	8	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	35958	360	35958	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTTGCCATGACCCTA	NA	NA	NA	NA	NA	NA	NA	NA	108534683	108552670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ENSMUSG00000040389.16_108537031_108552778_1	chr3	+	1920	7	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	38305	252	38305	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTTGTGTAATGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	108537030	108552778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ENSMUSG00000040389.16_108537064_108552864_1	chr3	+	1973	7	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	38338	166	38338	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTTTACTTTAAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	108537063	108552864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ENSMUSG00000040389.16_108544305_108553035_1	chr3	+	1968	5	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	45579	-5	45579	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCTTTTCTCACGGTC	NA	NA	NA	NA	NA	NA	NA	NA	108544304	108553035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ENSMUSG00000040410.15_22357616_22427362_1	chr4	+	1848	8	ISM	ENSMUSG00000040410.15	ENSMUST00000039234.10	2546	9	73	6729	73	-6729	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGAAACTCTTTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	22357615	22427362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149
ENSMUSG00000040410.15_22376575_22433700_1	chr4	+	1827	7	ISM	ENSMUSG00000040410.15	ENSMUST00000039234.10	2546	9	19032	391	19032	-391	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTCATAAAGAAGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	22376574	22433700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
ENSMUSG00000040410.15_22376903_22434064_1	chr4	+	1863	7	ISM	ENSMUSG00000040410.15	ENSMUST00000039234.10	2546	9	19360	27	19360	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAATAAAGTTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	22376902	22434064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
ENSMUSG00000040410.15_22376950_22434081_1	chr4	+	1833	7	ISM	ENSMUSG00000040410.15	ENSMUST00000039234.10	2546	9	19407	10	19407	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCACATCTTTCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	22376949	22434081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
ENSMUSG00000040412.18_108365643_108370280_1	chr3	-	689	5	ISM	ENSMUSG00000040412.18	ENST00000529753.5	2888	20	73513	5	73513	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAACCCTGCGCTCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	108370280	108365642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108365785_108367000_108367167_108368254_108368434_108368511_108368639_108370205
ENSMUSG00000040412.18_108367093_108371672_1	chr3	-	681	6	ISM	ENSMUSG00000040412.18	ENST00000529753.5	2888	20	72121	1455	72121	-1455	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCATCATGGAAGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	108371672	108367092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108367167_108368254_108368434_108368511_108368639_108370205_108370308_108370785_108370883_108371570
ENSMUSG00000040412.18_108368340_108373012_1	chr3	-	692	6	ISM	ENSMUSG00000040412.18	ENST00000529753.5	2888	20	70781	2702	70781	-2702	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAAAAGTGGGCATCTCG	NA	NA	NA	NA	NA	NA	NA	NA	108373012	108368339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108368434_108368511_108368639_108370205_108370308_108370785_108370883_108371570_108371752_108372921
ENSMUSG00000040412.18_108368626_108375178_1	chr3	-	677	6	ISM	ENSMUSG00000040412.18	ENST00000529753.5	2888	20	68615	2988	68615	-2988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACCTGTGATGGCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	108375178	108368625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108368639_108370205_108370308_108370785_108370883_108371570_108371752_108372921_108373096_108375068
ENSMUSG00000040412.18_108371689_108377273_1	chr3	-	695	5	ISM	ENSMUSG00000040412.18	ENST00000529753.5	2888	20	66520	6051	66520	-6051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCTCTAAGTCCGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	108377273	108371688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108371752_108372921_108373096_108375068_108375333_108376843_108376982_108377217
ENSMUSG00000040412.18_108372989_108378722_1	chr3	-	674	5	ISM	ENSMUSG00000040412.18	ENST00000529753.5	2888	20	65071	7351	65071	-7351	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGCTTCACCTCGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	108378722	108372988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108373096_108375068_108375333_108376843_108376982_108377217_108377324_108378663
ENSMUSG00000040412.18_108375213_108380157_1	chr3	-	703	6	ISM	ENSMUSG00000040412.18	ENST00000529753.5	2888	20	63636	9575	63636	-9575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTCTTGTCCTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	108380157	108375212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108375333_108376843_108376982_108377217_108377324_108378663_108378755_108379284_108379414_108380038
ENSMUSG00000040412.18_108376915_108389122_1	chr3	-	680	7	ISM	ENSMUSG00000040412.18	ENST00000529753.5	2888	20	54671	11277	54671	-11277	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTACACCATCGAAGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	108389122	108376914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108376982_108377217_108377324_108378663_108378755_108379284_108379414_108380038_108380217_108388601_108388686_108389097
ENSMUSG00000040412.18_108379284_108396196_1	chr3	-	672	6	ISM	ENSMUSG00000040412.18	ENST00000529753.5	2888	20	47597	13646	47597	-13646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCCCCCCCCCCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	108396196	108379283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108379414_108380038_108380217_108388601_108388686_108389097_108389179_108389646_108389795_108396145
ENSMUSG00000040412.18_108379323_108396263_1	chr3	-	700	6	ISM	ENSMUSG00000040412.18	ENST00000529753.5	2888	20	47530	13685	47530	-13685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTGGGATCAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	108396263	108379322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108379414_108380038_108380217_108388601_108388686_108389097_108389179_108389646_108389795_108396145
ENSMUSG00000040412.18_108380106_108399361_1	chr3	-	664	6	ISM	ENSMUSG00000040412.18	ENST00000529753.5	2888	20	44432	14468	44432	-14468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTCTTCAAAACCGACAA	NA	NA	NA	NA	NA	NA	NA	NA	108399361	108380105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108380217_108388601_108388686_108389097_108389179_108389646_108389795_108396145_108396339_108399314
ENSMUSG00000040415.16_127026247_127029672_1	chr10	-	1703	4	ISM	ENSMUSG00000040415.16	ENSMUST00000038217.14	1944	6	1906	0	663	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTCTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	127029672	127026246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127026909_127027204_127027423_127028477_127029227_127029598
ENSMUSG00000040415.16_127026511_127030461_1	chr10	-	1622	5	ISM	ENSMUSG00000040415.16	ENSMUST00000038217.14	1944	6	1117	264	-126	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGGTCTCTGGAACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	127030461	127026510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127026909_127027204_127027423_127028477_127029227_127029598_127029673_127030278
ENSMUSG00000040415.16_127029035_127030342_1	chr10	-	311	3	ISM	ENSMUSG00000040415.16	ENSMUST00000130855.8	1925	6	1236	2788	-7	-2341	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTCCTCCCCCAGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	127030342	127029034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127029208_127029598_127029673_127030278
ENSMUSG00000040433.17_96570247_96613728_1	chr9	-	1320	3	FSM	ENSMUSG00000040433.17	ENSMUST00000093798.9	4091	3	0	2771	0	-2771	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCACTCTCTCTAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	96613728	96570246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_96571083_96600262_96600363_96613344
ENSMUSG00000040435.13_45172341_45174393_1	chr7	-	1637	2	FSM	ENSMUSG00000040435.13	ENSMUST00000167273.2	2809	2	1177	-5	1177	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTACGTGTGTTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	45174393	45172340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_45172747_45173162
ENSMUSG00000040435.13_45172341_45174550_1	chr7	-	1794	2	FSM	ENSMUSG00000040435.13	ENSMUST00000167273.2	2809	2	1020	-5	1020	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTACGTGTGTTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	45174550	45172340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_45172747_45173162
ENSMUSG00000040435.13_45172541_45174598_1	chr7	-	1642	2	FSM	ENSMUSG00000040435.13	ENSMUST00000167273.2	2809	2	972	195	972	-195	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACAGTCCGAGCCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	45174598	45172540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_45172747_45173162
ENSMUSG00000040435.13_45173247_45175570_1	chr7	-	1721	2	ISM	ENSMUSG00000040435.13	ENSMUST00000042105.11	2333	3	122	906	0	-901	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTCGACTGCAGAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	45175570	45173246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45174816_45175418
ENSMUSG00000040435.13_45173317_45175570_1	chr7	-	1651	2	ISM	ENSMUSG00000040435.13	ENSMUST00000042105.11	2333	3	122	976	0	-971	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTCTTCCAGGTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	45175570	45173316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45174816_45175418
ENSMUSG00000040435.13_45173373_45175692_1	chr7	-	1717	2	ISM	ENSMUSG00000040435.13	ENSMUST00000042105.11	2333	3	0	1032	0	-1027	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGCCCCAGCGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	45175692	45173372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45174816_45175418
ENSMUSG00000040441.13_127009493_127014756_1	chr10	-	1385	12	ISM	ENSMUSG00000040441.13	ENST00000665594.1	1790	14	1638	0	1638	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGGAGTGGTCAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	127014756	127009492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127009576_127009765_127009895_127009967_127010038_127010152_127010260_127010674_127010771_127010853_127010932_127012440_127012555_127012675_127012824_127012955_127013039_127013806_127013960_127014211_127014377_127014597
ENSMUSG00000040441.13_127009512_127015508_1	chr10	-	1380	13	ISM	ENSMUSG00000040441.13	ENST00000665594.1	1790	14	886	19	886	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCGGGAAGTGGTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	127015508	127009511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127009576_127009765_127009895_127009967_127010038_127010152_127010260_127010674_127010771_127010853_127010932_127012440_127012555_127012675_127012824_127012955_127013039_127013806_127013960_127014211_127014377_127014597_127014756_127015493
ENSMUSG00000040441.13_127009763_127015604_1	chr10	-	1415	12	ISM	ENSMUSG00000040441.13	ENST00000665594.1	1790	14	790	270	790	-270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGGAACGTGGACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	127015604	127009762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127009895_127009967_127010038_127010152_127010260_127010674_127010771_127010853_127010932_127012440_127012555_127012675_127012824_127012955_127013039_127013806_127013960_127014211_127014377_127014597_127014756_127015493
ENSMUSG00000040441.13_127009876_127016136_1	chr10	-	1339	13	ISM	ENSMUSG00000040441.13	ENST00000665594.1	1790	14	258	383	258	-383	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATCCTGAGTTATCCA	NA	NA	NA	NA	NA	NA	NA	NA	127016136	127009875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127009895_127009967_127010038_127010152_127010260_127010674_127010771_127010853_127010932_127012440_127012555_127012675_127012824_127012955_127013039_127013806_127013960_127014211_127014377_127014597_127014756_127015493_127015605_127016099
ENSMUSG00000040441.13_127010226_127016350_1	chr10	-	1391	11	ISM	ENSMUSG00000040441.13	ENST00000665594.1	1790	14	44	733	44	-733	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGAATGTGGACCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	127016350	127010225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127010260_127010674_127010771_127010853_127010932_127012440_127012555_127012675_127012824_127012955_127013039_127013806_127013960_127014211_127014377_127014597_127014756_127015493_127015605_127016099
ENSMUSG00000040446.5_24619174_24640229_1	chr18	-	2459	3	ISM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	23032	1157	23032	-1157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAATCCCCAAACCACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	24640229	24619173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_24621389_24639890_24640067_24640161
ENSMUSG00000040446.5_24619283_24641148_1	chr18	-	2507	4	ISM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	22113	1266	22113	-1266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGATACTCTTTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	24641148	24619282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050
ENSMUSG00000040446.5_24619408_24641300_1	chr18	-	2456	5	ISM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	21961	1391	21961	-1391	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAGTGATTTATCCATC	NA	NA	NA	NA	NA	NA	NA	NA	24641300	24619407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226
ENSMUSG00000040446.5_24619721_24663115_1	chr18	-	2449	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	146	1704	146	-1704	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCAAACCACTGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	24663115	24619720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ENSMUSG00000040446.5_24619811_24663261_1	chr18	-	2505	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	0	1794	0	-1794	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTCCAATGACAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	24663261	24619810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ENSMUSG00000040451.19_32100578_32107008_1	chr19	-	1582	3	ISM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	81405	450	81405	-448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCATGTAATTCTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	32107008	32100577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_32101925_32102625_32102793_32106940
ENSMUSG00000040462.14_126931519_126956333_1	chr10	-	2373	14	ISM	ENSMUSG00000040462.14	ENSMUST00000164259.9	2627	15	667	-2	661	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCAGGCTCTGTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	126956333	126931518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_126932242_126932498_126932612_126932783_126932949_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237
ENSMUSG00000040462.14_126931519_126956984_1	chr10	-	2443	14	NNC	ENSMUSG00000040462.14	novel	2458	14	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCAGGCTCTGTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	126956984	126931518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_126932242_126932498_126932607_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ENSMUSG00000040462.14_126931664_126956396_1	chr10	-	2291	14	ISM	ENSMUSG00000040462.14	ENSMUST00000164259.9	2627	15	604	143	598	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGCCCAGACTATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	126956396	126931663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_126932242_126932498_126932612_126932783_126932949_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237
ENSMUSG00000040463.17_72338425_72338910_1	chr11	+	323	3	ISM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	6244	3684	6244	-3684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACAGAAGGAGAAGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	72338424	72338910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_72338466_72338555_72338709_72338781
ENSMUSG00000040472.16_55953334_55957319_1	chr14	-	1569	11	ISM	ENSMUSG00000040472.16	ENSMUST00000169237.8	2547	16	2314	0	645	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAGAAAAGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	55957319	55953333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252
ENSMUSG00000040472.16_55953614_55957925_1	chr14	-	1471	12	ISM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	1795	-168	39	168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTCACCATCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	55957925	55953613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760
ENSMUSG00000040472.16_55953782_55957794_1	chr14	-	997	9	FSM	ENSMUSG00000040472.16	ENST00000560777.5	1147	9	170	-20	170	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGCCAAGCTACCATTA	NA	NA	NA	NA	NA	NA	NA	NA	55957794	55953781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956995_55957164_55957252_55957337_55957760
ENSMUSG00000040472.16_55953926_55957804_1	chr14	-	858	9	NNC	ENSMUSG00000040472.16	novel	1147	9	NA	NA	160	-124	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCGCTGTGCCAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	55957804	55953925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956995_55957159_55957252_55957337_55957760
ENSMUSG00000040472.16_55953945_55957825_1	chr14	-	865	9	FSM	ENSMUSG00000040472.16	ENST00000560777.5	1147	9	139	143	139	-143	multi-exon	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTCAACCTGCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	55957825	55953944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956995_55957164_55957252_55957337_55957760
ENSMUSG00000040473.16_5634662_5639145_1	chr5	-	428	4	ISM	ENSMUSG00000040473.16	ENST00000497910.5	2292	19	68705	11	68705	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATGCAAAAGTAAGCATA	NA	NA	NA	NA	NA	NA	NA	NA	5639145	5634661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_5634849_5636355_5636433_5637140_5637279_5639119
ENSMUSG00000040473.16_5637203_5645995_1	chr5	-	426	4	ISM	ENSMUSG00000040473.16	ENST00000497910.5	2292	19	61855	2552	61855	-2552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTATGGATGTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	5645995	5637202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_5637279_5639119_5639313_5643771_5643854_5645920
ENSMUSG00000040473.16_5637263_5646039_1	chr5	-	410	4	ISM	ENSMUSG00000040473.16	ENST00000497910.5	2292	19	61811	2612	61811	-2612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTACTAGTTTTCAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	5646039	5637262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_5637279_5639119_5639313_5643771_5643854_5645920
ENSMUSG00000040473.16_5667325_5675812_1	chr5	-	419	5	ISM	ENSMUSG00000040473.16	ENSMUST00000135252.3	2188	16	38420	23679	32038	-23679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGATCATGGAGTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	5675812	5667324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_5667386_5668947_5669070_5669166_5669216_5671919_5672044_5675749
ENSMUSG00000040473.16_5669050_5676095_1	chr5	-	458	5	ISM	ENSMUSG00000040473.16	ENSMUST00000135252.3	2188	16	38137	25404	31755	-25404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAAGTCTTAAGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5676095	5669049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_5669070_5669166_5669216_5671919_5672044_5675749_5675928_5676008
ENSMUSG00000040473.16_5675839_5697011_1	chr5	-	437	5	ISM	ENSMUSG00000040473.16	ENST00000497910.5	2292	19	10839	41188	10839	-32193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCGTTCATCAGAAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	5697011	5675838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_5675928_5676008_5676159_5690182_5690228_5694423_5694501_5696935
ENSMUSG00000040473.16_5676068_5707810_1	chr5	-	412	6	ISM	ENSMUSG00000040473.16	ENST00000497910.5	2292	19	40	41417	40	-32422	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAGCTTGTCGAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	5707810	5676067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_5676159_5690182_5690228_5694423_5694501_5696935_5697046_5699789_5699856_5707787
ENSMUSG00000040481.18_106924734_106946801_1	chr11	-	3792	10	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	75605	35	-11308	-35	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTATGTTTTTAACAAATT	NA	NA	NA	NA	NA	NA	NA	NA	106946801	106924733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697
ENSMUSG00000040481.18_106924953_106949548_1	chr11	-	3793	11	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	72858	254	-14055	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTCTTTTAGTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	106949548	106924952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459
ENSMUSG00000040481.18_106925295_106952635_1	chr11	-	3815	13	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	69771	596	-17142	-596	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTAGTCCATGTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	106952635	106925294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509
ENSMUSG00000040481.18_106925427_106953422_1	chr11	-	3770	14	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	68984	728	-17929	-728	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCAGACAGGCTCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	106953422	106925426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361
ENSMUSG00000040481.18_106925452_106953507_1	chr11	-	3830	14	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	68899	753	-18014	-753	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCAGTAGAGCAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	106953507	106925451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361
ENSMUSG00000040481.18_106925692_106956838_1	chr11	-	3801	16	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	65568	993	-21345	-993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAATGACAGGAAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	106956838	106925691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771
ENSMUSG00000040481.18_106926005_106959194_1	chr11	-	3795	18	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	63212	1306	-23701	-1306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGGAGACACAAGTGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	106959194	106926004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100
ENSMUSG00000040481.18_106926223_106963729_1	chr11	-	3829	19	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	58677	1524	-28236	-1524	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGACGCTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	106963729	106926222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ENSMUSG00000040481.18_106926330_106963804_1	chr11	-	3797	19	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	58602	1631	-28311	-1631	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTATGGGGTCAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	106963804	106926329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ENSMUSG00000040481.18_106926330_106963872_1	chr11	-	3865	19	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	58534	1631	-28379	-1631	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTATGGGGTCAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	106963872	106926329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ENSMUSG00000040481.18_106931109_106964192_1	chr11	-	3792	18	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	58214	6410	-28699	2393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGAAGTTCTTGAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	106964192	106931108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ENSMUSG00000040481.18_106937911_106964877_1	chr11	-	3810	14	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	57529	13212	-29384	-4409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGATGATCTCTACCACC	NA	NA	NA	NA	NA	NA	NA	NA	106964877	106937910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ENSMUSG00000040481.18_106937984_106964930_1	chr11	-	3790	14	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	57476	13285	-29437	-4482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGCCCCACTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	106964930	106937983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ENSMUSG00000040481.18_106943672_106965174_1	chr11	-	3791	13	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	57232	18973	-29681	-10170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGATCCTGAGAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	106965174	106943671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ENSMUSG00000040481.18_106943727_106965228_1	chr11	-	3790	13	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	57178	19028	-29735	-10225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAATGCCAGCAAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	106965228	106943726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ENSMUSG00000040481.18_106943784_106965286_1	chr11	-	3791	13	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	57120	19085	-29793	-10282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAGGCGGCCAAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	106965286	106943783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ENSMUSG00000040481.18_106945741_106965487_1	chr11	-	3792	11	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	56919	21042	-29994	-12239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCGCCCCCCACATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	106965487	106945740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ENSMUSG00000040481.18_106945890_106965644_1	chr11	-	3800	11	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	56762	21191	-30151	-12388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTCAGCCTCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	106965644	106945889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ENSMUSG00000040481.18_106946038_106965782_1	chr11	-	3790	11	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	56624	21339	-30289	-12536	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCCTGCTCAGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	106965782	106946037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ENSMUSG00000040481.18_106946748_106967478_1	chr11	-	3798	11	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	54928	22049	-31985	-13246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAGCAGCAGCAACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	106967478	106946747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347
ENSMUSG00000040481.18_106952553_106972140_1	chr11	-	3792	12	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	50266	27854	-36647	-19051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAATACCTCAGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	106972140	106952552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041
ENSMUSG00000040481.18_106953552_106973389_1	chr11	-	3801	12	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	49017	28853	-37896	-20050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAACACAAGCAGCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	106973389	106953551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338
ENSMUSG00000040481.18_106959140_106985911_1	chr11	-	3789	10	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	36495	34441	36495	-25638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCAAGGCTCCTCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	106985911	106959139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106977537_106977724_106985827
ENSMUSG00000040481.18_106963625_106986640_1	chr11	-	3791	10	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	35766	38926	35766	-30123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGGCCAGGAAAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	106986640	106963624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106977537_106977724_106985827_106986017_106986541
ENSMUSG00000040481.18_106963704_106986727_1	chr11	-	3799	10	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	35679	39005	35679	-30202	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTGCCGTCCTATAGGA	NA	NA	NA	NA	NA	NA	NA	NA	106986727	106963703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106977537_106977724_106985827_106986017_106986541
ENSMUSG00000040481.18_106963822_106990474_1	chr11	-	3788	11	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	31932	39123	31932	-30320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGACCACTGCAGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	106990474	106963821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106977537_106977724_106985827_106986017_106986541_106986752_106990391
ENSMUSG00000040481.18_106963891_106990548_1	chr11	-	3793	11	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	31858	39192	31858	-30389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCGGTGTGGATACCATC	NA	NA	NA	NA	NA	NA	NA	NA	106990548	106963890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106977537_106977724_106985827_106986017_106986541_106986752_106990391
ENSMUSG00000040481.18_106964230_107001905_1	chr11	-	3788	12	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	20501	39531	20501	-30728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTCAGGTAGAAGATATG	NA	NA	NA	NA	NA	NA	NA	NA	107001905	106964229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106977537_106977724_106985827_106986017_106986541_106986752_106990391_106990616_107001638
ENSMUSG00000040481.18_106964286_107001965_1	chr11	-	3792	12	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	20441	39587	20441	-30784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCCAGTACCCAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	107001965	106964285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106977537_106977724_106985827_106986017_106986541_106986752_106990391_106990616_107001638
ENSMUSG00000040481.18_106964655_107002332_1	chr11	-	3790	12	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	20074	39956	20074	-31153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACAGAAAGAACAGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	107002332	106964654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106977537_106977724_106985827_106986017_106986541_106986752_106990391_106990616_107001638
ENSMUSG00000040481.18_106964938_107022255_1	chr11	-	3792	13	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	151	40239	151	-31436	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTCTGATAATATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	107022255	106964937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106977537_106977724_106985827_106986017_106986541_106986752_106990391_106990616_107001638_107002462_107022099
ENSMUSG00000040481.18_106965017_107022335_1	chr11	-	3793	13	ISM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	71	40318	71	-31515	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCCGGGCCTTCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	107022335	106965016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106977537_106977724_106985827_106986017_106986541_106986752_106990391_106990616_107001638_107002462_107022099
ENSMUSG00000040481.18_107022197_107022403_1	chr11	-	160	2	FSM	ENSMUSG00000040481.18	ENST00000675608.1	599	2	342	97	3	-97	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGATTATCCGGAGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	107022403	107022196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_107022281_107022327
ENSMUSG00000040481.18_107022252_107022454_1	chr11	-	156	2	FSM	ENSMUSG00000040481.18	ENST00000675608.1	599	2	291	152	-48	-152	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGGATTCCGAGGACG	NA	NA	NA	NA	NA	NA	NA	NA	107022454	107022251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_107022281_107022327
ENSMUSG00000040488.19_27004818_27008791_1	chr7	-	1073	6	ISM	ENSMUSG00000040488.19	ENST00000396819.8	4684	30	24257	-1	24247	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCGCCAAATCTCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	27008791	27004817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710
ENSMUSG00000040488.19_27005504_27010084_1	chr7	-	1162	7	ISM	ENSMUSG00000040488.19	ENSMUST00000118583.8	4726	29	22954	81	22954	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGTGTCGGTGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	27010084	27005503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945
ENSMUSG00000040488.19_27006048_27013749_1	chr7	-	1176	7	ISM	ENSMUSG00000040488.19	ENSMUST00000118583.8	4726	29	19289	625	19289	-625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACACCCGTGGCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	27013749	27006047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661
ENSMUSG00000040488.19_27006259_27018910_1	chr7	-	1099	8	ISM	ENSMUSG00000040488.19	ENSMUST00000118583.8	4726	29	14128	836	14128	-836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGTCTCCCCTATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	27018910	27006258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835
ENSMUSG00000040488.19_27008386_27021578_1	chr7	-	1112	8	ISM	ENSMUSG00000040488.19	ENSMUST00000118583.8	4726	29	11460	2963	11460	-2963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGCGACGCTGCGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	27021578	27008385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446
ENSMUSG00000040488.19_27024508_27028270_1	chr7	-	1096	8	ISM	ENSMUSG00000040488.19	ENST00000396819.8	4684	30	4778	19689	4768	-19085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCGTTCCACTGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	27028270	27024507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026798_27027062_27027213_27027610_27027776_27028164
ENSMUSG00000040489.6_45871137_45908486_1	chr11	+	2169	4	FSM	ENSMUSG00000040489.6	ENST00000311371.9	2614	4	109	336	0	-335	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATATCATCTGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	45871136	45908486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_45872201_45874145_45874386_45875543_45875724_45907801
ENSMUSG00000040489.6_45871435_45908822_1	chr11	+	2207	4	FSM	ENSMUSG00000040489.6	ENST00000311371.9	2614	4	407	0	298	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTGTTAAATGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	45871434	45908822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_45872201_45874145_45874386_45875543_45875724_45907801
ENSMUSG00000040511.15_19644640_19652636_1	chr7	-	616	4	ISM	ENSMUSG00000040511.15	ENSMUST00000043517.8	2905	8	2449	7137	2449	-7137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTCTAATCTCCACCG	NA	NA	NA	NA	NA	NA	NA	NA	19652636	19644639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19644682_19648662_19648790_19650798_19651096_19652486
ENSMUSG00000040520.8_26327633_26336730_1	chr4	-	863	3	ISM	ENSMUSG00000040520.8	ENST00000358812.9	1445	4	4267	0	4267	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGTCTACTAGCTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	26336730	26327632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_26328309_26329085_26329163_26336620
ENSMUSG00000040520.8_26327633_26340564_1	chr4	-	935	3	FSM	ENSMUSG00000040520.8	ENST00000683151.1	1368	3	433	0	433	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGTCTACTAGCTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	26340564	26327632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_26328309_26336620_26336728_26340412
ENSMUSG00000040520.8_26327743_26336730_1	chr4	-	753	3	ISM	ENSMUSG00000040520.8	ENST00000358812.9	1445	4	4267	110	4267	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATCTAGAACTAACT	NA	NA	NA	NA	NA	NA	NA	NA	26336730	26327742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_26328309_26329085_26329163_26336620
ENSMUSG00000040520.8_26327743_26340564_1	chr4	-	825	3	FSM	ENSMUSG00000040520.8	ENST00000683151.1	1368	3	433	110	433	-110	multi-exon	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATCTAGAACTAACT	NA	NA	NA	NA	NA	NA	NA	NA	26340564	26327742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_26328309_26336620_26336728_26340412
ENSMUSG00000040520.8_26327880_26340534_1	chr4	-	734	4	ISM	ENSMUSG00000040520.8	ENSMUST00000041374.8	4867	5	6357	3374	463	-247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCACTCCAGACCCACC	NA	NA	NA	NA	NA	NA	NA	NA	26340534	26327879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416
ENSMUSG00000040520.8_26328045_26340895_1	chr4	-	854	3	FSM	ENSMUSG00000040520.8	ENST00000683151.1	1368	3	102	412	102	-412	multi-exon	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATCTCATCAGAATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	26340895	26328044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_26328309_26336620_26336728_26340412
ENSMUSG00000040520.8_26329086_26340979_1	chr4	-	750	3	ISM	ENSMUSG00000040520.8	ENSMUST00000041374.8	4867	5	5912	4580	18	-1453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTTCTTCAACGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	26340979	26329085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_26329163_26336620_26336731_26340416
ENSMUSG00000040521.12_126858201_126866687_1	chr10	-	1179	6	NNC	ENSMUSG00000040521.12	novel	1206	6	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGTGTGAGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	126866687	126858200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866501_126866612
ENSMUSG00000040521.12_126858201_126866687_2	chr10	-	1179	6	NNC	ENSMUSG00000040521.12	novel	1206	6	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGTGTGAGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	126866687	126858200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_126858796_126860804_126860893_126864238_126864357_126865422_126865552_126866331_126866506_126866612
ENSMUSG00000040521.12_126858201_126866687_3	chr10	-	1178	6	NNC	ENSMUSG00000040521.12	novel	1206	6	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGTGTGAGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	126866687	126858200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_126858796_126860804_126860893_126864233_126864357_126865428_126865552_126866331_126866506_126866612
ENSMUSG00000040532.15_135038267_135040234_1	chr5	+	908	4	ISM	ENSMUSG00000040532.15	ENSMUST00000046999.12	1493	6	114	795	-43	-611	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGCACGCCCCCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	135038266	135040234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135038694_135038835_135038972_135039740_135039915_135040063
ENSMUSG00000040532.15_135038425_135040423_1	chr5	+	836	5	ISM	ENSMUSG00000040532.15	ENSMUST00000046999.12	1493	6	272	606	115	-422	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCACTTGGACAAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	135038424	135040423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135038694_135038835_135038972_135039740_135039915_135040063_135040235_135040337
ENSMUSG00000040532.15_135038545_135039805_1	chr5	+	492	2	ISM	ENSMUSG00000040532.15	ENST00000395147.9	599	4	-289	1040	235	-1040	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTCAGGACCTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	135038544	135039805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135038972_135039740
ENSMUSG00000040532.15_135038545_135040845_1	chr5	+	917	6	FSM	ENSMUSG00000040532.15	ENSMUST00000046999.12	1493	6	392	184	235	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGCTGTCACCAGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	135038544	135040845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_135038694_135038835_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
ENSMUSG00000040537.18_8128686_8166605_1	chr5	-	593	7	ISM	ENSMUSG00000040537.18	ENST00000265727.11	2730	29	250758	90	250758	-90	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAACTGTTTACATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	8166605	8128685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_8128707_8132145_8132270_8142339_8142407_8142730_8142832_8145072_8145181_8161874_8161986_8166544
ENSMUSG00000040537.18_8142323_8195720_1	chr5	-	1771	18	ISM	ENSMUSG00000040537.18	ENST00000398201.8	2519	27	221643	7	221643	-7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAAGGTTCTGTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	8195720	8142322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_8142407_8142730_8142832_8145072_8145181_8161874_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552
ENSMUSG00000040537.18_8142728_8196527_1	chr5	-	1762	18	ISM	ENSMUSG00000040537.18	ENST00000398201.8	2519	27	220836	412	220836	-412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAGTGCTCAGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	8196527	8142727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_8142832_8145072_8145181_8161874_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454
ENSMUSG00000040537.18_8145070_8199286_1	chr5	-	1739	18	ISM	ENSMUSG00000040537.18	ENST00000398201.8	2519	27	218077	2754	218077	-2754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTCTGTCGCATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8199286	8145069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_8145181_8161874_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207
ENSMUSG00000040537.18_8161875_8208896_1	chr5	-	1765	19	ISM	ENSMUSG00000040537.18	ENST00000398201.8	2519	27	208467	19559	208467	-19559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTACTTTCAAAATGCAC	NA	NA	NA	NA	NA	NA	NA	NA	8208896	8161874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826
ENSMUSG00000040537.18_8166629_8217372_1	chr5	-	1680	20	ISM	ENSMUSG00000040537.18	ENST00000398201.8	2519	27	199991	24313	199991	-24313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCACTGGACAGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	8217372	8166628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326
ENSMUSG00000040537.18_8167587_8282676_1	chr5	-	1755	20	ISM	ENSMUSG00000040537.18	ENST00000398201.8	2519	27	134687	25271	134687	-25271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCAGAGCCTCACCCG	NA	NA	NA	NA	NA	NA	NA	NA	8282676	8167586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609
ENSMUSG00000040537.18_8167705_8380018_1	chr5	-	1676	21	ISM	ENSMUSG00000040537.18	ENST00000398201.8	2519	27	37345	25389	37345	-25389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGCCCTGTGGCCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	8380018	8167704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979
ENSMUSG00000040537.18_8171048_8417221_1	chr5	-	1682	21	ISM	ENSMUSG00000040537.18	ENST00000398201.8	2519	27	142	28732	142	23300	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCATCGAACCATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	8417221	8171047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200
ENSMUSG00000040537.18_8171085_8417294_1	chr5	-	1718	21	ISM	ENSMUSG00000040537.18	ENST00000398201.8	2519	27	69	28769	69	23263	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAGTTGTGCAGCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	8417294	8171084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200
ENSMUSG00000040537.18_8171152_8417333_1	chr5	-	1690	21	ISM	ENSMUSG00000040537.18	ENST00000398201.8	2519	27	30	28836	30	23196	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTCCTGTGCACAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	8417333	8171151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200
ENSMUSG00000040548.17_106393342_106397721_1	chr11	-	1232	2	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	106005	386	72218	-369	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTCAAAATTACCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	106397721	106393341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106394545_106397692
ENSMUSG00000040548.17_106393395_106397785_1	chr11	-	1243	2	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	105941	439	72154	-422	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGCTTTGAGGAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	106397785	106393394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106394545_106397692
ENSMUSG00000040548.17_106393520_106402807_1	chr11	-	1226	3	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	100919	564	67132	-547	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCCTCAGTGGCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	106402807	106393519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106394545_106397692_106397814_106402727
ENSMUSG00000040548.17_106393830_106410763_1	chr11	-	1228	5	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	92963	874	59176	-857	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACCCACACTTTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	106410763	106393829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707
ENSMUSG00000040548.17_106393968_106420180_1	chr11	-	1260	6	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	83546	1012	49759	-995	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCATCCTTGGAGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	106420180	106393967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087
ENSMUSG00000040548.17_106394118_106424806_1	chr11	-	1227	7	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	78920	1162	45133	-1145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTATGACAGCAAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	106424806	106394117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696
ENSMUSG00000040548.17_106394242_106435090_1	chr11	-	1233	8	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	68636	1286	34849	-1269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTATCTGGTTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	106435090	106394241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997
ENSMUSG00000040548.17_106394324_106458089_1	chr11	-	2146	11	ISM	ENSMUSG00000040548.17	ENSMUST00000042780.14	4934	12	45667	1351	11850	-1351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTACTGTCTCTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	106458089	106394323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790
ENSMUSG00000040548.17_106394343_106435166_1	chr11	-	1208	8	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	68560	1387	34773	-1370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCCTTTCCTGGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	106435166	106394342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997
ENSMUSG00000040548.17_106394477_106437557_1	chr11	-	1239	9	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	66169	1521	32382	-1504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCACTTCCTGCCTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	106437557	106394476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435264_106437489
ENSMUSG00000040548.17_106394514_106437667_1	chr11	-	1312	9	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	66059	1558	32272	-1541	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATTCCTATAATGCAC	NA	NA	NA	NA	NA	NA	NA	NA	106437667	106394513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435264_106437489
ENSMUSG00000040548.17_106402893_106439604_1	chr11	-	1222	8	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	64122	9937	30335	-9920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGATCACCAAATCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	106439604	106402892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435264_106437489_106437830_106439539
ENSMUSG00000040548.17_106404514_106439738_1	chr11	-	1210	7	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	63988	11558	30201	-11541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGACAGTGATGAAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	106439738	106404513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435264_106437489_106437830_106439539
ENSMUSG00000040548.17_106410708_106457936_1	chr11	-	1333	7	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	45790	17752	12003	-17735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGGGCTATATATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	106457936	106410707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106410841_106420087_106420188_106424696_106424844_106434997_106435264_106437489_106437830_106439539_106439741_106457790
ENSMUSG00000040548.17_106424753_106458137_1	chr11	-	1245	5	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	45589	31797	11802	10131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGGTCTGATGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	106458137	106424752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106424844_106434997_106435264_106437489_106437830_106439539_106439741_106457790
ENSMUSG00000040548.17_106424810_106458183_1	chr11	-	1234	5	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	45543	31854	11756	10074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCCTGGGTGAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	106458183	106424809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106424844_106434997_106435264_106437489_106437830_106439539_106439741_106457790
ENSMUSG00000040548.17_106435108_106458308_1	chr11	-	1215	4	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	45418	42152	11631	-224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCCTAGACTACAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	106458308	106435107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106435264_106437489_106437830_106439539_106439741_106457790
ENSMUSG00000040548.17_106435154_106458373_1	chr11	-	1234	4	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	45353	42198	11566	-270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAGCCAAAGCAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	106458373	106435153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106435264_106437489_106437830_106439539_106439741_106457790
ENSMUSG00000040548.17_106435201_106458433_1	chr11	-	1247	4	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	45293	42245	11506	-317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCACAGCCGCAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	106458433	106435200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106435264_106437489_106437830_106439539_106439741_106457790
ENSMUSG00000040548.17_106437593_106458591_1	chr11	-	1239	3	ISM	ENSMUSG00000040548.17	ENSMUST00000103070.3	2645	5	11348	2709	11348	-2709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACGGGCCGAGAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	106458591	106437592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106437830_106439539_106439741_106457790
ENSMUSG00000040548.17_106437739_106458748_1	chr11	-	1250	3	ISM	ENSMUSG00000040548.17	ENSMUST00000103070.3	2645	5	11191	2855	11191	-2855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAAGGCGCAGTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	106458748	106437738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106437830_106439539_106439741_106457790
ENSMUSG00000040548.17_106439570_106458865_1	chr11	-	1246	2	ISM	ENSMUSG00000040548.17	ENSMUST00000103070.3	2645	5	11074	4686	11074	-4686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAAATCTATGACCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	106458865	106439569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106439741_106457790
ENSMUSG00000040548.17_106439625_106458919_1	chr11	-	1245	2	ISM	ENSMUSG00000040548.17	ENSMUST00000103070.3	2645	5	11020	4741	11020	-4741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATCCAGGAGGGCAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	106458919	106439624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106439741_106457790
ENSMUSG00000040548.17_106439694_106458965_1	chr11	-	1222	2	ISM	ENSMUSG00000040548.17	ENSMUST00000103070.3	2645	5	10974	4810	10974	-4810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGACGCACTCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	106458965	106439693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106439741_106457790
ENSMUSG00000040549.17_91416118_91443125_1	chr2	+	2056	14	ISM	ENSMUSG00000040549.17	ENSMUST00000099716.11	6574	43	39451	7882	39440	-7882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTCTCCCAAATTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	91416117	91443125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084
ENSMUSG00000040549.17_91426712_91450556_1	chr2	+	2054	13	ISM	ENSMUSG00000040549.17	ENSMUST00000099716.11	6574	43	50045	451	50034	-451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCGCAAATGAAGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	91426711	91450556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ENSMUSG00000040549.17_91426757_91450615_1	chr2	+	2068	13	ISM	ENSMUSG00000040549.17	ENSMUST00000099716.11	6574	43	50090	392	50079	-392	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTAGTGTGAAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	91426756	91450615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ENSMUSG00000040549.17_91426848_91450674_1	chr2	+	2036	13	ISM	ENSMUSG00000040549.17	ENSMUST00000099716.11	6574	43	50181	333	50170	-333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGCAGATGGGAGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	91426847	91450674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ENSMUSG00000040550.18_14810395_14812474_1	chr4	-	1376	2	ISM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	14113	888	14036	-888	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACAACAATTTATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	14812474	14810394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_14811749_14812452
ENSMUSG00000040550.18_14810553_14815664_1	chr4	-	1365	3	ISM	ENSMUSG00000040550.18	ENST00000615618.1	1328	8	10846	-945	10846	945	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCAATCACTTCGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	14815664	14810552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_14811749_14812452_14812560_14815602
ENSMUSG00000040550.18_14810686_14818299_1	chr4	-	1356	4	ISM	ENSMUSG00000040550.18	ENST00000615618.1	1328	8	8211	-812	8211	812	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTTGTTTTCACTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	14818299	14810685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175
ENSMUSG00000040550.18_14810763_14818404_1	chr4	-	1384	4	ISM	ENSMUSG00000040550.18	ENST00000615618.1	1328	8	8106	-735	8106	735	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAGACCTCTGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	14818404	14810762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175
ENSMUSG00000040550.18_14810994_14825553_1	chr4	-	1373	6	ISM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	1034	1487	957	504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCTCCAGCAGAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	14825553	14810993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498
ENSMUSG00000040550.18_14811057_14825622_1	chr4	-	1379	6	ISM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	965	1550	888	441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTGGAGATCTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	14825622	14811056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498
ENSMUSG00000040550.18_14811187_14826451_1	chr4	-	1441	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	136	1680	59	311	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTCTGCTGCTAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	14826451	14811186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ENSMUSG00000040550.18_14811280_14826472_1	chr4	-	1369	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	115	1773	38	218	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTGACAGCAGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	14826472	14811279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ENSMUSG00000040550.18_14811347_14826587_1	chr4	-	1417	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	0	1840	0	151	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGATTTCAATTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	14826587	14811346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ENSMUSG00000040550.18_14811498_14826587_1	chr4	-	1405	8	FSM	ENSMUSG00000040550.18	ENST00000615618.1	1328	8	-77	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGTAGAACTTAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	14826587	14811497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14819975_14820115_14822691_14822773_14825498_14825654_14826290
ENSMUSG00000040554.11_71920079_71927617_1	chr11	-	703	4	FSM	ENSMUSG00000040554.11	ENST00000250087.9	703	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCTGGATTCCACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	71927617	71920078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_71920283_71921032_71921175_71921251_71921429_71927437
ENSMUSG00000040554.11_71921028_71927617_1	chr11	-	667	4	NNC	ENSMUSG00000040554.11	novel	668	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGCAGGGGTGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	71927617	71921027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_71921175_71921251_71921403_71922242_71922432_71927437
ENSMUSG00000040554.11_71921028_71927617_2	chr11	-	669	4	FSM	ENSMUSG00000040554.11	ENST00000571740.5	668	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGCAGGGGTGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	71927617	71921027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_71921175_71921251_71921405_71922242_71922432_71927437
ENSMUSG00000040560.11_63853306_63998389_1	chr18	+	3235	19	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	20	124428	20	-124428	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCACGTCTTACGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	63853305	63998389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355
ENSMUSG00000040560.11_63853357_63998443_1	chr18	+	3238	19	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	71	124374	71	-124374	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATAGGGGCAGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	63853356	63998443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355
ENSMUSG00000040560.11_63853392_63998511_1	chr18	+	3271	19	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	106	124306	106	-124306	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAATCCCTGAAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	63853391	63998511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355
ENSMUSG00000040560.11_63860784_64057944_1	chr18	+	3237	18	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	7498	64873	7498	-64873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTCATCGCCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	63860783	64057944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882
ENSMUSG00000040560.11_63861527_64059694_1	chr18	+	3240	18	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	8241	63123	8241	-63123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	753	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATACACACCACCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	63861526	64059694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649
ENSMUSG00000040560.11_63863227_64060419_1	chr18	+	3302	18	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	9941	62398	9941	-62398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGAAGCCTTCAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	63863226	64060419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336
ENSMUSG00000040560.11_63869471_64112495_1	chr18	+	3311	18	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	16185	10322	16185	-10322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCCAGTCTTAAATATG	NA	NA	NA	NA	NA	NA	NA	NA	63869470	64112495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390
ENSMUSG00000040560.11_63871862_64120314_1	chr18	+	3244	18	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	18576	2503	18576	-2503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCATCCCCTGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	63871861	64120314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ENSMUSG00000040560.11_63871915_64120363_1	chr18	+	3240	18	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	18629	2454	18629	-2454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACTTCCAACCGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	63871914	64120363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ENSMUSG00000040560.11_63873140_64120690_1	chr18	+	3235	16	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	19854	2127	19854	-2127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGTGGCTCCTGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	63873139	64120690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ENSMUSG00000040560.11_63873193_64120747_1	chr18	+	3239	16	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	19907	2070	19907	-2070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCAGTGTGACTGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	63873192	64120747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ENSMUSG00000040560.11_63873259_64120808_1	chr18	+	3234	16	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	19973	2009	19973	-2009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGAAGTGACTTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	63873258	64120808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ENSMUSG00000040560.11_63888135_64120922_1	chr18	+	3260	15	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	34849	1895	34849	-1895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTGAGGATTTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	63888134	64120922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ENSMUSG00000040560.11_63888191_64120974_1	chr18	+	3256	15	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	34905	1843	34905	-1843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCTAATGAGAAAATATTAA	NA	NA	NA	NA	NA	NA	NA	NA	63888190	64120974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ENSMUSG00000040560.11_63888244_64121024_1	chr18	+	3253	15	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	34958	1793	34958	-1793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGATAACTAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	63888243	64121024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ENSMUSG00000040560.11_63910638_64121318_1	chr18	+	3234	13	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	57352	1499	57352	-1499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	687	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGACCAGTGAAAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	63910637	64121318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ENSMUSG00000040560.11_63910686_64121379_1	chr18	+	3247	13	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	57400	1438	57400	-1438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	971	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTAGACACATTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	63910685	64121379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ENSMUSG00000040560.11_63910923_64121614_1	chr18	+	3245	13	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	57637	1203	57637	-1203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGTTAGTTACACAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	63910922	64121614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ENSMUSG00000040560.11_63911291_64122499_1	chr18	+	3258	14	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	58005	318	58005	-318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCTCAGCTTGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	63911290	64122499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226_64121933_64122436
ENSMUSG00000040560.11_63911350_64122542_1	chr18	+	3242	14	ISM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	58064	275	58064	-275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCATCCCAGTACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	63911349	64122542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226_64121933_64122436
ENSMUSG00000040560.11_63927339_64122698_1	chr18	+	3247	12	ISM	ENSMUSG00000040560.11	ENST00000254442.8	6369	28	74053	119	74053	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGCATATAGTGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	63927338	64122698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226_64121933_64122436
ENSMUSG00000040560.11_63929227_64122825_1	chr18	+	3300	11	ISM	ENSMUSG00000040560.11	ENST00000254442.8	6369	28	75941	-8	75941	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAAGGTGGTTTTTATCC	NA	NA	NA	NA	NA	NA	NA	NA	63929226	64122825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226_64121933_64122436
ENSMUSG00000040562.13_107891320_107892388_1	chr3	-	163	3	ISM	ENSMUSG00000040562.13	ENSMUST00000066530.7	854	8	1288	2057	1288	-2057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGAATATTTGAGCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	107892388	107891319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107891363_107891444_107891541_107892364
ENSMUSG00000040562.13_107892934_107893676_1	chr3	-	144	3	ISM	ENSMUSG00000040562.13	ENSMUST00000012348.9	1064	8	93	3916	0	-3671	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTGGAGGAGGAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	107893676	107892933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107892999_107893349_107893426_107893673
ENSMUSG00000040563.14_21848329_21858944_1	chr9	+	1370	10	FSM	ENSMUSG00000040563.14	ENSMUST00000046371.13	2626	10	0	1256	0	-369	multi-exon	TRUE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCCAGGGCGCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	21848328	21858944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_21848455_21849690_21849861_21850594_21850675_21851980_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858365_21858676_21858729_21858899
ENSMUSG00000040563.14_21849749_21859108_1	chr9	+	1350	9	ISM	ENSMUSG00000040563.14	ENSMUST00000046371.13	2626	10	1420	1092	0	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGGGCCGGAAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	21849748	21859108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21849861_21850594_21850675_21851980_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858365_21858676_21858729_21858899
ENSMUSG00000040563.14_21852019_21859313_1	chr9	+	1325	7	ISM	ENSMUSG00000040563.14	ENSMUST00000188468.2	1480	9	2270	0	2270	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCCCCTGCCCTCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	21852018	21859313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858365_21858676_21858729_21858899
ENSMUSG00000040563.14_21852098_21859386_1	chr9	+	1319	7	ISM	ENSMUSG00000040563.14	ENSMUST00000188468.2	1480	9	2349	-73	2349	73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAATCTCTTGGCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	21852097	21859386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858365_21858676_21858729_21858899
ENSMUSG00000040563.14_21854761_21859713_1	chr9	+	1324	5	ISM	ENSMUSG00000040563.14	ENSMUST00000188468.2	1480	9	5012	-400	5012	400	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCCAAGTCAAAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	21854760	21859713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21854919_21855691_21855869_21858241_21858365_21858676_21858729_21858899
ENSMUSG00000040563.14_21855748_21859904_1	chr9	+	1301	4	ISM	ENSMUSG00000040563.14	ENSMUST00000188468.2	1480	9	5999	-591	5999	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGAATTCTGGACGCTG	NA	NA	NA	NA	NA	NA	NA	NA	21855747	21859904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21855869_21858241_21858365_21858676_21858729_21858899
ENSMUSG00000040586.9_165183950_165223700_1	chrX	-	3017	19	ISM	ENSMUSG00000040586.9	ENSMUST00000049501.9	4453	23	0	10921	0	-10921	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTTCAAGACTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	165223700	165183949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ENSMUSG00000040591.19_91108175_91113005_1	chr2	-	1498	4	ISM	ENSMUSG00000040591.19	ENSMUST00000102594.11	1977	9	161982	0	161962	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGACTGCCTGCTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	91113005	91108174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809
ENSMUSG00000040591.19_91108431_91135157_1	chr2	-	1392	6	ISM	ENSMUSG00000040591.19	ENSMUST00000094835.9	1498	8	139868	-158	139810	158	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCAGGTGTTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	91135157	91108430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093
ENSMUSG00000040591.19_91108589_91274983_1	chr2	-	1559	9	FSM	ENSMUSG00000040591.19	ENSMUST00000102594.11	1977	9	4	414	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATGAGTCTAAAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	91274983	91108588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093_91135179_91214073_91214205_91252210_91252314_91274913
ENSMUSG00000040599.14_70910688_70917603_1	chr11	+	2158	3	FSM	ENSMUSG00000040599.14	ENSMUST00000048807.12	3003	3	251	594	251	-594	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCAGAGGCAGGTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	70910687	70917603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70911016_70915375_70915538_70915935
ENSMUSG00000040599.14_70910717_70917671_1	chr11	+	2197	3	FSM	ENSMUSG00000040599.14	ENSMUST00000048807.12	3003	3	280	526	280	-526	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGAGACCCCATCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	70910716	70917671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70911016_70915375_70915538_70915935
ENSMUSG00000040599.14_70910717_70917727_1	chr11	+	2253	3	FSM	ENSMUSG00000040599.14	ENSMUST00000048807.12	3003	3	280	470	280	-470	multi-exon	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATTGGTAAAGCAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	70910716	70917727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70911016_70915375_70915538_70915935
ENSMUSG00000040599.14_70915427_70918090_1	chr11	+	2266	2	ISM	ENSMUSG00000040599.14	ENSMUST00000048807.12	3003	3	4990	107	4990	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGATCTCACCCTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	70915426	70918090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70915538_70915935
ENSMUSG00000040605.8_97157942_97209693_1	chr16	+	666	3	ISM	ENSMUSG00000040605.8	ENST00000347667.5	3030	8	-47	30024	0	-30024	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCAGGTCTTTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	97157941	97209693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97158302_97200833_97200923_97209476
ENSMUSG00000040605.8_97200831_97216380_1	chr16	+	675	5	ISM	ENSMUSG00000040605.8	ENST00000347667.5	3030	8	42842	23337	42842	-23337	internal_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCCCAAGATGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	97200830	97216380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97200923_97209476_97209694_97213257_97213387_97214548_97214684_97216278
ENSMUSG00000040605.8_97209475_97225796_1	chr16	+	692	5	ISM	ENSMUSG00000040605.8	ENST00000347667.5	3030	8	51486	13921	51486	-13921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTACGTGGTCTTTGACA	NA	NA	NA	NA	NA	NA	NA	NA	97209474	97225796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97209694_97213257_97213387_97214548_97214684_97216278_97216381_97225689
ENSMUSG00000040605.8_97209647_97237873_1	chr16	+	614	6	ISM	ENSMUSG00000040605.8	ENST00000347667.5	3030	8	51658	1844	51658	-1844	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCCTTTTCCACGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	97209646	97237873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97209694_97213257_97213387_97214548_97214684_97216278_97216381_97225689_97225859_97237841
ENSMUSG00000040605.8_97213256_97238009_1	chr16	+	705	5	ISM	ENSMUSG00000040605.8	ENST00000347667.5	3030	8	55267	1708	55267	-1708	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCCGCTGCACTGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	97213255	97238009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97213387_97214548_97214684_97216278_97216381_97225689_97225859_97237841
ENSMUSG00000040605.8_97216278_97238150_1	chr16	+	581	3	ISM	ENSMUSG00000040605.8	ENST00000347667.5	3030	8	58289	1567	58289	-1567	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTTGGCTTCTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	97216277	97238150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97216381_97225689_97225859_97237841
ENSMUSG00000040605.8_97216278_97238209_1	chr16	+	640	3	ISM	ENSMUSG00000040605.8	ENST00000347667.5	3030	8	58289	1508	58289	-1508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGTATCTTGATTACTC	NA	NA	NA	NA	NA	NA	NA	NA	97216277	97238209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97216381_97225689_97225859_97237841
ENSMUSG00000040605.8_97225775_97238363_1	chr16	+	606	2	ISM	ENSMUSG00000040605.8	ENST00000347667.5	3030	8	67786	1354	67786	-1354	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAAACAACCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	97225774	97238363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_97225859_97237841
ENSMUSG00000040606.15_141832161_141869083_1	chr4	-	1146	8	ISM	ENSMUSG00000040606.15	ENST00000376030.7	2105	14	68436	61	68436	-61	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGCCGGAACAGTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	141869083	141832160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141832266_141834122_141834238_141835856_141836024_141836587_141836690_141839418_141839651_141844395_141844515_141845385_141845592_141868983
ENSMUSG00000040606.15_141832236_141870641_1	chr4	-	1132	9	ISM	ENSMUSG00000040606.15	ENST00000376030.7	2105	14	66878	136	66878	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	728	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGCAAAGAGCCCGATTT	NA	NA	NA	NA	NA	NA	NA	NA	141870641	141832235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141832266_141834122_141834238_141835856_141836024_141836587_141836690_141839418_141839651_141844395_141844515_141845385_141845592_141868983_141869108_141870604
ENSMUSG00000040606.15_141834184_141874393_1	chr4	-	1120	9	ISM	ENSMUSG00000040606.15	ENST00000376030.7	2105	14	63126	2084	63126	-2084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATCACCAGAGCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	141874393	141834183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141834238_141835856_141836024_141836587_141836690_141839418_141839651_141844395_141844515_141845385_141845592_141868983_141869108_141870604_141870656_141874328
ENSMUSG00000040606.15_141835857_141878242_1	chr4	-	1215	9	ISM	ENSMUSG00000040606.15	ENSMUST00000155023.9	4898	15	326801	6156	59277	-3757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAAGCCACGGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	141878242	141835856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141836024_141836587_141836690_141839418_141839651_141844395_141844515_141845385_141845592_141868983_141869108_141870604_141870656_141874328_141874457_141878156
ENSMUSG00000040606.15_141836662_141881786_1	chr4	-	1124	9	ISM	ENSMUSG00000040606.15	ENSMUST00000155023.9	4898	15	323257	6961	55733	-4562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACAGAACACAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	141881786	141836661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141836690_141839418_141839651_141844395_141844515_141845385_141845592_141868983_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740
ENSMUSG00000040606.15_141839493_141886365_1	chr4	-	1158	9	ISM	ENSMUSG00000040606.15	ENSMUST00000155023.9	4898	15	318678	9792	51154	-7393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCAAGAAGTTCCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	141886365	141839492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141839651_141844395_141844515_141845385_141845592_141868983_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354
ENSMUSG00000040606.15_141839493_141886491_1	chr4	-	1284	9	ISM	ENSMUSG00000040606.15	ENSMUST00000155023.9	4898	15	318552	9792	51028	-7393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1092	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCAAGAAGTTCCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	141886491	141839492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141839651_141844395_141844515_141845385_141845592_141868983_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354
ENSMUSG00000040606.15_141844396_141937419_1	chr4	-	1220	9	ISM	ENSMUSG00000040606.15	ENSMUST00000155023.9	4898	15	267624	14695	100	-12296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	828	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCCACTGAAACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	141937419	141844395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141844515_141845385_141845592_141868983_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325
ENSMUSG00000040616.4_141759337_141764778_1	chr4	-	128	2	FSM	ENSMUSG00000040616.4	ENST00000434578.6	871	2	323	420	323	-420	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCCGGAAACCAGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	141764778	141759336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_141759402_141764715
ENSMUSG00000040618.8_55778087_55781152_1	chr14	+	611	3	ISM	ENSMUSG00000040618.8	ENST00000545054.6	2419	10	224	5107	224	-5107	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGCAGCTGGGCAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	55778086	55781152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55778345_55779862_55780109_55781045
ENSMUSG00000040618.8_55778208_55781368_1	chr14	+	620	4	ISM	ENSMUSG00000040618.8	ENST00000545054.6	2419	10	345	4891	345	-4891	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCGCATTGGAGTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	55778207	55781368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55778345_55779862_55780109_55781045_55781231_55781316
ENSMUSG00000040618.8_55778271_55781414_1	chr14	+	603	4	ISM	ENSMUSG00000040618.8	ENST00000545054.6	2419	10	408	4845	408	-4845	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGCGTATTATGACCCG	NA	NA	NA	NA	NA	NA	NA	NA	55778270	55781414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55778345_55779862_55780109_55781045_55781231_55781316
ENSMUSG00000040618.8_55778311_55781475_1	chr14	+	624	4	ISM	ENSMUSG00000040618.8	ENST00000545054.6	2419	10	448	4784	448	-4784	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCAAGTGTCTGCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	55778310	55781475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55778345_55779862_55780109_55781045_55781231_55781316
ENSMUSG00000040618.8_55779862_55782039_1	chr14	+	824	4	ISM	ENSMUSG00000040618.8	ENST00000559250.5	1656	9	4	4266	4	-4220	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGCCTGGTGAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	55779861	55782039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55780109_55781045_55781231_55781316_55781521_55781851
ENSMUSG00000040618.8_55779986_55782468_1	chr14	+	827	5	ISM	ENSMUSG00000040618.8	ENST00000559250.5	1656	9	128	3837	128	-3791	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATGACATCGCCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	55779985	55782468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341
ENSMUSG00000040618.8_55780030_55782397_1	chr14	+	712	5	ISM	ENSMUSG00000040618.8	ENST00000559250.5	1656	9	172	3908	172	-3862	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCCTGTGGCAAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	55780029	55782397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341
ENSMUSG00000040618.8_55780094_55782504_1	chr14	+	755	5	ISM	ENSMUSG00000040618.8	ENST00000559250.5	1656	9	236	3801	236	-3755	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGGGCCCTTTTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	55780093	55782504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341
ENSMUSG00000040618.8_55781045_55782753_1	chr14	+	831	5	ISM	ENSMUSG00000040618.8	ENST00000559250.5	1656	9	1187	3552	1187	-3506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAGTAATACTCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	55781044	55782753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663
ENSMUSG00000040618.8_55781401_55785197_1	chr14	+	734	5	ISM	ENSMUSG00000040618.8	ENST00000559250.5	1656	9	1543	1108	1543	-1062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTCGCCAGTGCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	55781400	55785197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153
ENSMUSG00000040618.8_55781401_55785231_1	chr14	+	768	5	ISM	ENSMUSG00000040618.8	ENST00000559250.5	1656	9	1543	1074	1543	-1028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGCACCAGAAGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	55781400	55785231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153
ENSMUSG00000040618.8_55781401_55785514_1	chr14	+	846	6	ISM	ENSMUSG00000040618.8	ENST00000559250.5	1656	9	1543	791	1543	-745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTTCAACTGGCGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	55781400	55785514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496
ENSMUSG00000040618.8_55781851_55786123_1	chr14	+	835	6	ISM	ENSMUSG00000040618.8	ENST00000559250.5	1656	9	1993	182	1993	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	724	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGCTACCTGACAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	55781850	55786123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55786093
ENSMUSG00000040618.8_55782341_55786307_1	chr14	+	831	5	ISM	ENSMUSG00000040618.8	ENST00000559250.5	1656	9	2483	-2	2483	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGAGTGTTGGAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	55782340	55786307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55786093
ENSMUSG00000040618.8_55782429_55785843_1	chr14	+	611	5	ISM	ENSMUSG00000040618.8	ENST00000545054.6	2419	10	4566	416	2571	-416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGAGGGACAAAAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	55782428	55785843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUSG00000040618.8_55782444_55785941_1	chr14	+	694	5	ISM	ENSMUSG00000040618.8	ENST00000545054.6	2419	10	4581	318	2586	-318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGCTCGTGTGCTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	55782443	55785941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUSG00000040618.8_55782758_55785926_1	chr14	+	524	4	ISM	ENSMUSG00000040618.8	ENST00000545054.6	2419	10	4895	333	2900	-333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGGCTTTGGAGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	55782757	55785926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUSG00000040618.8_55785153_55786123_1	chr14	+	597	3	ISM	ENSMUSG00000040618.8	ENST00000545054.6	2419	10	7290	136	5295	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGCTACCTGACAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	55785152	55786123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55785292_55785496_55785593_55785761
ENSMUSG00000040618.8_55785495_55786307_1	chr14	+	644	2	ISM	ENSMUSG00000040618.8	ENST00000561286.5	1933	9	7632	-2	5637	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGAGTGTTGGAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	55785494	55786307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55785593_55785761
ENSMUSG00000040627.15_122538211_122538864_1	chr6	+	95	2	ISM	ENSMUSG00000040627.15	ENST00000537228.5	509	3	1785	51	767	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACATGAAAATTCTGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	122538210	122538864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_122538271_122538829
ENSMUSG00000040631.9_95590488_95593777_1	chr8	-	2074	5	ISM	ENSMUSG00000040631.9	ENST00000566936.5	2624	7	4027	32	4027	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTGTTGATCAATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	95593777	95590487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95592091_95592248_95592388_95593084_95593275_95593375_95593496_95593755
ENSMUSG00000040631.9_95590488_95593841_1	chr8	-	2138	5	ISM	ENSMUSG00000040631.9	ENST00000566936.5	2624	7	3963	32	3963	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTGTTGATCAATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	95593841	95590487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95592091_95592248_95592388_95593084_95593275_95593375_95593496_95593755
ENSMUSG00000040631.9_95590642_95594037_1	chr8	-	2031	6	ISM	ENSMUSG00000040631.9	ENST00000566936.5	2624	7	3767	186	3767	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGACCACCCAGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	95594037	95590641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95592091_95592248_95592388_95593084_95593275_95593375_95593496_95593755_95593871_95594019
ENSMUSG00000040631.9_95590695_95594099_1	chr8	-	2040	6	ISM	ENSMUSG00000040631.9	ENST00000566936.5	2624	7	3705	239	3705	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGCCCTAGAGCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	95594099	95590694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95592091_95592248_95592388_95593084_95593275_95593375_95593496_95593755_95593871_95594019
ENSMUSG00000040631.9_95590821_95597585_1	chr8	-	2040	7	FSM	ENSMUSG00000040631.9	ENST00000566936.5	2624	7	219	365	219	-333	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACATCAAACCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	95597585	95590820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_95592091_95592248_95592388_95593084_95593275_95593375_95593496_95593755_95593871_95594019_95594128_95597487
ENSMUSG00000040631.9_95590897_95597665_1	chr8	-	2044	7	FSM	ENSMUSG00000040631.9	ENST00000566936.5	2624	7	139	441	139	391	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGAAATGCAATTAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	95597665	95590896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_95592091_95592248_95592388_95593084_95593275_95593375_95593496_95593755_95593871_95594019_95594128_95597487
ENSMUSG00000040631.9_95590967_95597721_1	chr8	-	2030	7	FSM	ENSMUSG00000040631.9	ENST00000566936.5	2624	7	83	511	83	321	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCAGCCACCCCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	95597721	95590966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_95592091_95592248_95592388_95593084_95593275_95593375_95593496_95593755_95593871_95594019_95594128_95597487
ENSMUSG00000040631.9_95591464_95591987_1	chr8	-	434	2	ISM	ENSMUSG00000040631.9	ENST00000569548.5	1765	8	5880	176	5817	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTTAATTCCACGACC	NA	NA	NA	NA	NA	NA	NA	NA	95591987	95591463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95591876_95591965
ENSMUSG00000040631.9_95591620_95592310_1	chr8	-	439	3	ISM	ENSMUSG00000040631.9	ENSMUST00000212810.2	2558	8	5522	1164	5494	-332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGACCTCAGCACATG	NA	NA	NA	NA	NA	NA	NA	NA	95592310	95591619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95591876_95591969_95592091_95592248
ENSMUSG00000040631.9_95591770_95593144_1	chr8	-	426	4	ISM	ENSMUSG00000040631.9	ENSMUST00000212810.2	2558	8	4688	1314	4660	-482	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCCCAGTGACAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	95593144	95591769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95591876_95591969_95592091_95592248_95592388_95593084
ENSMUSG00000040649.16_122424390_122436254_1	chr6	-	754	5	ISM	ENSMUSG00000040649.16	ENST00000619374.4	1321	8	13492	0	7240	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTGGATGAAGATAGATC	NA	NA	NA	NA	NA	NA	NA	NA	122436254	122424389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_122424419_122426786_122426952_122429512_122429723_122433476_122433623_122436050
ENSMUSG00000040649.16_122429513_122440982_1	chr6	-	693	5	ISM	ENSMUSG00000040649.16	ENST00000619374.4	1321	8	8764	5123	2512	547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGCTTCCTCCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	122440982	122429512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_122429723_122433476_122433623_122436050_122436255_122437919_122438007_122440936
ENSMUSG00000040649.16_122429626_122441097_1	chr6	-	695	5	ISM	ENSMUSG00000040649.16	ENST00000619374.4	1321	8	8649	5236	2397	434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGAGCTTTGGGGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	122441097	122429625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_122429723_122433476_122433623_122436050_122436255_122437919_122438007_122440936
ENSMUSG00000040649.16_122433477_122449513_1	chr6	-	684	5	ISM	ENSMUSG00000040649.16	ENST00000619374.4	1321	8	233	9087	233	-2258	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTTCATCGCCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	122449513	122433476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497
ENSMUSG00000040649.16_122436085_122449692_1	chr6	-	683	4	ISM	ENSMUSG00000040649.16	ENST00000619374.4	1321	8	54	11695	54	-4866	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATGGAAGGATGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	122449692	122436084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_122436255_122437919_122438007_122440936_122441168_122449497
ENSMUSG00000040651.10_27150969_27164486_1	chr14	+	848	6	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	59	39445	59	-39445	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCCTACCCCAAAACATG	NA	NA	NA	NA	NA	NA	NA	NA	27150968	27164486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415
ENSMUSG00000040651.10_27151278_27170189_1	chr14	+	865	9	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	368	33742	368	-33742	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATCGTGCCTTTCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	27151277	27170189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111
ENSMUSG00000040651.10_27160554_27171817_1	chr14	+	935	9	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	9644	32114	9644	-32114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAGAAATTAAATTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	27160553	27171817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713
ENSMUSG00000040651.10_27162106_27172006_1	chr14	+	893	9	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	11196	31925	11196	-31925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTGAAAAGTTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	27162105	27172006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902
ENSMUSG00000040651.10_27163385_27181808_1	chr14	+	873	9	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	12475	22123	12475	-22123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTAGTCTGGCTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	27163384	27181808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735
ENSMUSG00000040651.10_27163843_27181969_1	chr14	+	871	9	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	12933	21962	12933	-21962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTGTTTTTTAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	27163842	27181969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897
ENSMUSG00000040651.10_27164476_27183168_1	chr14	+	846	9	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	13566	20763	13566	-20763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATTTTCATTCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	27164475	27183168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040
ENSMUSG00000040651.10_27164524_27183225_1	chr14	+	855	9	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	13614	20706	13614	-20706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCGGGTAAGCGAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	27164523	27183225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040
ENSMUSG00000040651.10_27168414_27183363_1	chr14	+	867	8	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	17504	20568	17504	-20568	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTCTATTTTTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	27168413	27183363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040
ENSMUSG00000040651.10_27170183_27183513_1	chr14	+	861	6	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	19273	20418	19273	-20418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAACCTGAACAGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	27170182	27183513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040
ENSMUSG00000040651.10_27171795_27183619_1	chr14	+	851	5	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	20885	20312	20885	-20312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCAGATCCAGAAGATACA	NA	NA	NA	NA	NA	NA	NA	NA	27171794	27183619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040
ENSMUSG00000040651.10_27183197_27186290_1	chr14	+	834	2	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	32287	17641	32287	-17641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGGATGCTCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	27183196	27186290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27183743_27186002
ENSMUSG00000040651.10_27183350_27188173_1	chr14	+	843	3	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	32440	15758	32440	-15758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTTTCTATTGAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	27183349	27188173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27183743_27186002_27186403_27188123
ENSMUSG00000040651.10_27183538_27193606_1	chr14	+	842	5	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	32628	10325	32628	-10325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCACCAGTGGAGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	27183537	27193606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27183743_27186002_27186403_27188123_27188269_27189462_27189523_27193574
ENSMUSG00000040651.10_27183596_27193658_1	chr14	+	836	5	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	32686	10273	32686	-10273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGTGATTACCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	27183595	27193658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27183743_27186002_27186403_27188123_27188269_27189462_27189523_27193574
ENSMUSG00000040651.10_27183659_27193740_1	chr14	+	855	5	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	32749	10191	32749	-10191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGCGATGGCAGTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	27183658	27193740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27183743_27186002_27186403_27188123_27188269_27189462_27189523_27193574
ENSMUSG00000040651.10_27186052_27193858_1	chr14	+	840	4	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	35142	10073	35142	-10073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGAAGGAGAAGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	27186051	27193858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27186403_27188123_27188269_27189462_27189523_27193574
ENSMUSG00000040651.10_27186212_27194012_1	chr14	+	834	4	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	35302	9919	35302	-9919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGTTGTTATTACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	27186211	27194012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27186403_27188123_27188269_27189462_27189523_27193574
ENSMUSG00000040651.10_27186244_27194084_1	chr14	+	874	4	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	35334	9847	35334	-9847	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCAGCATTGGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	27186243	27194084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27186403_27188123_27188269_27189462_27189523_27193574
ENSMUSG00000040651.10_27188166_27194230_1	chr14	+	819	3	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	37256	9701	37256	-9701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGAATCGGCCACACCA	NA	NA	NA	NA	NA	NA	NA	NA	27188165	27194230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27188269_27189462_27189523_27193574
ENSMUSG00000040651.10_27188206_27194291_1	chr14	+	840	3	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	37296	9640	37296	-9640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATACAGTCCTGGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	27188205	27194291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27188269_27189462_27189523_27193574
ENSMUSG00000040651.10_27193678_27197671_1	chr14	+	846	2	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	42768	6260	42768	-6260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGAGTGTCATCCGG	NA	NA	NA	NA	NA	NA	NA	NA	27193677	27197671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27194504_27197651
ENSMUSG00000040651.10_27193727_27197723_1	chr14	+	849	2	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	42817	6208	42817	-6208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTATTGATTATTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	27193726	27197723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27194504_27197651
ENSMUSG00000040651.10_27193828_27198565_1	chr14	+	870	3	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	42918	5366	42918	-5366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATCATACATACAACG	NA	NA	NA	NA	NA	NA	NA	NA	27193827	27198565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27194504_27197651_27197775_27198494
ENSMUSG00000040651.10_27193941_27199088_1	chr14	+	866	4	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	43031	4843	43031	-4843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTCCTTGAAGAACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	27193940	27199088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27194504_27197651_27197775_27198494_27198655_27199068
ENSMUSG00000040651.10_27194106_27201617_1	chr14	+	822	5	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	43196	2314	43196	-2314	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAATGTGTATCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	27194105	27201617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585
ENSMUSG00000040651.10_27194160_27201682_1	chr14	+	833	5	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	43250	2249	43250	-2249	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCGAAATGCTCCAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	27194159	27201682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585
ENSMUSG00000040651.10_27194290_27201943_1	chr14	+	848	6	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	43380	1988	43380	-1988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTATGCAAAACTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	27194289	27201943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880
ENSMUSG00000040651.10_27194435_27202925_1	chr14	+	861	7	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	43525	1006	43525	-1006	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAATCTCACATATAGA	NA	NA	NA	NA	NA	NA	NA	NA	27194434	27202925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ENSMUSG00000040651.10_27197745_27203071_1	chr14	+	845	6	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	46835	860	46835	-860	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAAGACTTATTTAATTG	NA	NA	NA	NA	NA	NA	NA	NA	27197744	27203071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ENSMUSG00000040651.10_27198604_27203194_1	chr14	+	829	5	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	47694	737	47694	-737	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACAAATGTCCCATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	27198603	27203194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ENSMUSG00000040651.10_27199127_27203302_1	chr14	+	828	4	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	48217	629	48217	-629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTATCTGCTTACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	27199126	27203302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27199178_27201585_27201765_27201880_27202049_27202872
ENSMUSG00000040651.10_27201693_27203465_1	chr14	+	833	3	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	50783	466	50783	-466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTATTTAAATCATGATG	NA	NA	NA	NA	NA	NA	NA	NA	27201692	27203465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27201765_27201880_27202049_27202872
ENSMUSG00000040651.10_27201975_27203643_1	chr14	+	845	2	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	51065	288	51065	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGTAAATAGTAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	27201974	27203643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_27202049_27202872
ENSMUSG00000040652.17_65583873_65596799_1	chr9	+	860	4	FSM	ENSMUSG00000040652.17	ENST00000559753.1	785	4	-2	-73	0	73	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTGCAGGGGCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	65583872	65596799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_65584048_65595079_65595256_65596102_65596189_65596376
ENSMUSG00000040652.17_65583873_65597259_1	chr9	+	1470	5	NNC	ENSMUSG00000040652.17	novel	1843	6	NA	NA	0	-293	intron_retention	FALSE	canonical	NA	NA	NA	NA	1957	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGGATCTCTTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	65583872	65597259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_65584048_65593477_65593636_65595079_65595256_65596110_65596189_65596376
ENSMUSG00000040652.17_65583873_65597276_1	chr9	+	1495	5	NIC	ENSMUSG00000040652.17	novel	1843	6	NA	NA	0	-276	intron_retention	FALSE	canonical	NA	NA	NA	NA	2106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCAAGAGCAGAGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	65583872	65597276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_65584048_65593477_65593636_65595079_65595256_65596102_65596189_65596376
ENSMUSG00000040652.17_65583873_65597582_1	chr9	+	1801	5	NIC	ENSMUSG00000040652.17	novel	1843	6	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	3869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTCTGTCTTTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	65583872	65597582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_65584048_65593477_65593636_65595079_65595256_65596102_65596189_65596376
ENSMUSG00000040652.17_65595088_65597582_1	chr9	+	1460	3	ISM	ENSMUSG00000040652.17	ENSMUST00000153700.9	1843	6	11258	0	11213	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTCTGTCTTTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	65595087	65597582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65595256_65596102_65596189_65596376
ENSMUSG00000040652.17_65595221_65596492_1	chr9	+	151	2	ISM	ENSMUSG00000040652.17	ENST00000560258.6	1690	4	11353	1060	11346	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATGAGGACTAATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	65595220	65596492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65595256_65596376
ENSMUSG00000040653.7_3316057_3373565_1	chr10	+	985	2	ISM	ENSMUSG00000040653.7	ENSMUST00000043374.7	2617	4	0	41410	0	-41410	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCGAAATTACAGGTAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	3316056	3373565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_3316970_3373493
ENSMUSG00000040653.7_3316544_3413814_1	chr10	+	969	4	FSM	ENSMUSG00000040653.7	ENSMUST00000043374.7	2617	4	487	1161	0	-1161	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTCTTATGGTCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	3316543	3413814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_3316970_3373493_3373578_3375733_3375767_3413388
ENSMUSG00000040653.7_3373515_3414192_1	chr10	+	900	3	ISM	ENSMUSG00000040653.7	ENSMUST00000043374.7	2617	4	57458	783	56971	-783	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATTGTGGTTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	3373514	3414192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_3373578_3375733_3375767_3413388
ENSMUSG00000040658.8_46807637_46828023_1	chr17	+	1234	5	NNC	ENSMUSG00000040658.8	novel	1190	4	NA	NA	0	17473	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	971	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATTAAATATTCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	46807636	46828023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802_46810551_46827979
ENSMUSG00000040659.4_141585453_141601951_1	chr4	-	2101	4	FSM	ENSMUSG00000040659.4	ENSMUST00000036854.4	2381	4	280	0	280	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGCCGAAGGAGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	141601951	141585452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_141587190_141587858_141587994_141589115_141589264_141601870
ENSMUSG00000040663.10_4264359_4272756_1	chr19	+	992	3	FSM	ENSMUSG00000040663.10	ENSMUST00000046506.7	1847	3	67	788	67	-788	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGTGTAACTCAATAAGC	NA	NA	NA	NA	NA	NA	NA	NA	4264358	4272756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4264555_4270231_4270399_4272127
ENSMUSG00000040663.10_4264411_4272827_1	chr19	+	1011	3	FSM	ENSMUSG00000040663.10	ENSMUST00000046506.7	1847	3	119	717	119	-717	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGATGCCTGAGGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	4264410	4272827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4264555_4270231_4270399_4272127
ENSMUSG00000040663.10_4264484_4272889_1	chr19	+	1000	3	FSM	ENSMUSG00000040663.10	ENSMUST00000046506.7	1847	3	192	655	192	-655	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCACTCAGTCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	4264483	4272889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4264555_4270231_4270399_4272127
ENSMUSG00000040663.10_4270330_4273043_1	chr19	+	985	2	ISM	ENSMUSG00000040663.10	ENSMUST00000046506.7	1847	3	6038	501	6038	-501	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGTTCAGGAAACAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	4270329	4273043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4270399_4272127
ENSMUSG00000040666.20_96007741_96025081_1	chr16	+	454	5	ISM	ENSMUSG00000040666.20	ENSMUST00000171181.9	678	7	5870	679	5870	-679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGTCTGCCATCATTAA	NA	NA	NA	NA	NA	NA	NA	NA	96007740	96025081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_96007868_96015212_96015294_96020688_96020761_96021698_96021792_96025000
ENSMUSG00000040667.12_70834002_70847148_1	chr11	-	1467	12	ISM	ENSMUSG00000040667.12	ENSMUST00000108531.8	2453	17	13651	104	13632	-74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTGTGGTTATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	70847148	70834001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961
ENSMUSG00000040667.12_70834764_70849180_1	chr11	-	1350	12	ISM	ENSMUSG00000040667.12	ENSMUST00000108531.8	2453	17	11619	866	11600	-836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCATTACTCTCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	70849180	70834763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091
ENSMUSG00000040667.12_70835724_70858783_1	chr11	-	1371	11	ISM	ENSMUSG00000040667.12	ENSMUST00000035283.11	2450	17	2005	1816	1997	-1796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAGAACAGTACATTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	70858783	70835723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673
ENSMUSG00000040675.18_3934125_3957819_1	chr10	+	400	4	ISM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	10981	148292	10981	-148292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTCTCAATTGCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	3934124	3957819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_3934209_3935565_3935667_3939860_3939998_3957741
ENSMUSG00000040675.18_3997904_4033876_1	chr10	+	389	4	ISM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	74760	72235	74760	-72235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTCTTGTTTTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	3997903	4033876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_3997972_3998199_3998269_4006749_4006862_4033736
ENSMUSG00000040680.10_23960983_23961364_1	chr17	-	301	2	ISM	ENSMUSG00000040680.10	ENST00000575769.1	1935	8	2635	572	2635	-572	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTATGGGTCCAGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	23961364	23960982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23961250_23961330
ENSMUSG00000040680.10_23961110_23961825_1	chr17	-	637	2	ISM	ENSMUSG00000040680.10	ENST00000572045.5	2122	7	2280	699	2174	-699	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGTGTGGGGTCTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	23961825	23961109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23961457_23961535
ENSMUSG00000040680.10_23961114_23961579_1	chr17	-	306	3	ISM	ENSMUSG00000040680.10	ENST00000575769.1	1935	8	2420	703	2420	-703	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCTCGGGTGTGGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	23961579	23961113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23961250_23961330_23961457_23961535
ENSMUSG00000040680.10_23961331_23962605_1	chr17	-	690	4	ISM	ENSMUSG00000040680.10	ENST00000575769.1	1935	8	1394	920	1394	-920	internal_fragment	TRUE	canonical	NA	NA	NA	NA	923	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGCTGATTTACAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	23962605	23961330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23961457_23961535_23961869_23962193_23962348_23962528
ENSMUSG00000040680.10_23961675_23963624_1	chr17	-	673	5	ISM	ENSMUSG00000040680.10	ENST00000575769.1	1935	8	375	1264	375	-1264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGCAACCTACTCCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	23963624	23961674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23961869_23962193_23962348_23962528_23962654_23962726_23962819_23963516
ENSMUSG00000040680.10_23961831_23963967_1	chr17	-	643	6	ISM	ENSMUSG00000040680.10	ENST00000575769.1	1935	8	32	1420	32	-1420	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGAGTCATCTACTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	23963967	23961830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23961869_23962193_23962348_23962528_23962654_23962726_23962819_23963516_23963692_23963908
ENSMUSG00000040680.10_23962208_23964097_1	chr17	-	721	5	ISM	ENSMUSG00000040680.10	ENST00000572045.5	2122	7	8	1797	8	-1797	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCATCTATGAAGGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	23964097	23962207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23962348_23962528_23962654_23962726_23962819_23963516_23963692_23963908
ENSMUSG00000040681.17_95922097_95926047_1	chr16	-	1639	2	NNC	ENSMUSG00000040681.17	novel	619	4	NA	NA	2757	-279	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTTTCCCAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	95926047	95922096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_95923611_95925922
ENSMUSG00000040681.17_95922172_95928542_1	chr16	-	1649	4	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	262	-354	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGGCCTGGCTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	95928542	95922171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_95923618_95925922_95926039_95928348_95928404_95928510
ENSMUSG00000040681.17_95922172_95928666_1	chr16	-	1685	5	ISM	ENSMUSG00000040681.17	ENSMUST00000050884.16	2174	6	263	354	138	-354	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGGCCTGGCTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	95928666	95922171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631
ENSMUSG00000040681.17_95922231_95928403_1	chr16	-	1554	3	NNC	ENSMUSG00000040681.17	novel	619	4	NA	NA	401	-413	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATGAGTGACGTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	95928403	95922230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_95923611_95925922_95926046_95928352
ENSMUSG00000040681.17_95922294_95928666_1	chr16	-	1550	4	NNC	ENSMUSG00000040681.17	novel	619	4	NA	NA	138	-476	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCACCAGTGCAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	95928666	95922293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928614
ENSMUSG00000040681.17_95922294_95928929_3	chr16	-	1693	5	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	0	-476	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCACCAGTGCAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	95928929	95922293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928535_95928758
ENSMUSG00000040681.17_95922294_95928929_4	chr16	-	1675	4	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	0	-476	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCACCAGTGCAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	95928929	95922293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928752
ENSMUSG00000040681.17_95922294_95928929_5	chr16	-	1698	6	FSM	ENSMUSG00000040681.17	ENSMUST00000050884.16	2174	6	0	476	0	-476	multi-exon	FALSE	canonical	NA	NA	NA	NA	2108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCACCAGTGCAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	95928929	95922293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
ENSMUSG00000040688.17_24917938_24919871_1	chr17	-	1844	2	ISM	ENSMUSG00000040688.17	ENST00000615855.4	2330	21	5273	-1746	5273	-1015	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCAGCAATGGAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	24919871	24917937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24919760_24919849
ENSMUSG00000040688.17_24917999_24919944_1	chr17	-	1856	2	ISM	ENSMUSG00000040688.17	ENST00000615855.4	2330	21	5200	-1685	5200	-1076	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTACATAGGTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	24919944	24917998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24919760_24919849
ENSMUSG00000040688.17_24918144_24920165_1	chr17	-	1847	3	ISM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	6469	1221	4979	-1221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCCAACAAGTGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	24920165	24918143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24919760_24919849_24920009_24920093
ENSMUSG00000040688.17_24918369_24920762_1	chr17	-	1832	6	ISM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	5872	1446	4382	1315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTCTTATGTCAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	24920762	24918368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715
ENSMUSG00000040688.17_24918605_24921212_1	chr17	-	1871	8	ISM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	5422	1682	3932	1079	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCCTTGGCACGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	24921212	24918604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118
ENSMUSG00000040688.17_24918702_24921262_1	chr17	-	1824	8	ISM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	5372	1779	3882	982	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATTGGCCTTGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	24921262	24918701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118
ENSMUSG00000040688.17_24918821_24921496_1	chr17	-	1839	9	ISM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	5138	1898	3648	863	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCGTTCCTGGCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	24921496	24918820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449
ENSMUSG00000040688.17_24918977_24922310_1	chr17	-	1883	10	ISM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	4324	2054	2834	707	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCGGTCTGAGGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	24922310	24918976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211
ENSMUSG00000040688.17_24919134_24923134_1	chr17	-	1815	12	ISM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	3500	2211	2010	550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGACATTGCAGGGAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	24923134	24919133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109
ENSMUSG00000040688.17_24919215_24923205_1	chr17	-	1805	12	ISM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	3429	2292	1939	469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTCAGCCACCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	24923205	24919214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109
ENSMUSG00000040688.17_24919271_24923251_1	chr17	-	1795	12	ISM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	3383	2348	1893	413	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGACTCTGGATGGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	24923251	24919270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109
ENSMUSG00000040688.17_24919432_24923807_1	chr17	-	1933	15	ISM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	2827	2509	1337	252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCACTCTTAATCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	24923807	24919431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784
ENSMUSG00000040688.17_24919684_24925140_1	chr17	-	2328	21	ISM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	1494	2761	4	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCATGCCCTGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	24925140	24919683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088
ENSMUSG00000040688.17_24919684_24925144_1	chr17	-	2326	21	NNC	ENSMUSG00000040688.17	novel	2330	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCATGCCCTGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	24925144	24919683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922310_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088
ENSMUSG00000040688.17_24919684_24925144_2	chr17	-	2327	21	NNC	ENSMUSG00000040688.17	novel	2330	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCATGCCCTGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	24925144	24919683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924375_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088
ENSMUSG00000040688.17_24919684_24925144_3	chr17	-	2326	21	NNC	ENSMUSG00000040688.17	novel	2330	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCATGCCCTGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	24925144	24919683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920956_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088
ENSMUSG00000040688.17_24920818_24926605_1	chr17	-	1864	17	ISM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	29	3895	29	-1134	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGGATGCTCACGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	24926605	24920817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
ENSMUSG00000040697.11_141485677_141495310_1	chr4	-	592	6	ISM	ENSMUSG00000040697.11	ENST00000375849.5	2053	14	21075	36	21075	-36	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCAGCCCCGGATGATCT	NA	NA	NA	NA	NA	NA	NA	NA	141495310	141485676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141485732_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201
ENSMUSG00000040697.11_141491995_141497255_1	chr4	-	587	6	ISM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	20947	4495	19130	-4495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCAATTTGGTACGCCT	NA	NA	NA	NA	NA	NA	NA	NA	141497255	141491994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163
ENSMUSG00000040697.11_141495246_141501964_1	chr4	-	607	4	ISM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	16238	7746	14421	-7746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGAAGCTGTGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	141501964	141495245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141495385_141497163_141497348_141498217_141498349_141501811
ENSMUSG00000040697.11_141497284_141504330_1	chr4	-	584	5	ISM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	13872	9784	12055	-9784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGCCCTGGCAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	141504330	141497283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205
ENSMUSG00000040697.11_141504283_141516280_1	chr4	-	590	4	ISM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	1922	16783	105	-16783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCACAACGCAGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	141516280	141504282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_141504391_141510083_141510418_141511998_141512066_141516199
ENSMUSG00000040699.14_106048608_106050032_1	chr11	-	1237	3	ISM	ENSMUSG00000040699.14	ENSMUST00000064545.11	798	5	721	-649	721	649	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAGAACACAGAGATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	106050032	106048607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106049660_106049760_106049901_106049987
ENSMUSG00000040699.14_106048809_106050968_1	chr11	-	1223	5	FSM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	0	1727	0	448	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATAGCGAGGGGAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	106050968	106048808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106050876
ENSMUSG00000040712.17_70561017_70562342_1	chr11	-	494	5	ISM	ENSMUSG00000040712.17	ENST00000572543.5	4469	22	16415	725	16415	-725	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTTTCTTCAAAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	70562342	70561016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70561089_70561171_70561247_70561374_70561563_70561813_70561906_70562275
ENSMUSG00000040712.17_70561413_70562768_1	chr11	-	485	4	ISM	ENSMUSG00000040712.17	ENST00000572543.5	4469	22	15989	1121	15989	-1121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACCGGCCCTCAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	70562768	70561412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70561563_70561813_70561906_70562275_70562460_70562709
ENSMUSG00000040712.17_70561476_70562814_1	chr11	-	468	4	ISM	ENSMUSG00000040712.17	ENST00000572543.5	4469	22	15943	1184	15943	-1184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCCGAGCAGCGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	70562814	70561475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70561563_70561813_70561906_70562275_70562460_70562709
ENSMUSG00000040712.17_70561528_70562868_1	chr11	-	470	4	ISM	ENSMUSG00000040712.17	ENST00000572543.5	4469	22	15889	1236	15889	-1236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGATTCAGAGCAAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	70562868	70561527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70561563_70561813_70561906_70562275_70562460_70562709
ENSMUSG00000040712.17_70573393_70574984_1	chr11	-	460	5	ISM	ENSMUSG00000040712.17	ENST00000572543.5	4469	22	3773	13101	3773	-13101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCAGAGGAATTCTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	70574984	70573392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_70573422_70573719_70573874_70574104_70574192_70574715_70574852_70574930
ENSMUSG00000040713.13_165591315_165602272_2	chr1	+	1558	4	FSM	ENSMUSG00000040713.13	ENSMUST00000111432.10	2163	4	0	605	0	-605	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTTGGGTTCCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	165591314	165602272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_165591708_165597381_165597502_165598200_165598386_165601412
ENSMUSG00000040713.13_165597379_165602613_1	chr1	+	1509	3	ISM	ENSMUSG00000040713.13	ENSMUST00000040298.5	425	4	334	-1126	334	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACATAATTGTAAACCAT	NA	NA	NA	NA	NA	NA	NA	NA	165597378	165602613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_165597502_165598200_165598386_165601412
ENSMUSG00000040713.13_165598225_165602877_1	chr1	+	1626	2	ISM	ENSMUSG00000040713.13	ENSMUST00000040298.5	425	4	1180	-1390	1180	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGGACTGATTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	165598224	165602877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_165598386_165601412
ENSMUSG00000040714.15_19128365_19133288_1	chr7	-	1550	12	ISM	ENSMUSG00000040714.15	ENSMUST00000047170.10	1901	13	515	0	515	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGCGATCTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	19133288	19128364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208
ENSMUSG00000040714.15_19128489_19133474_1	chr7	-	1612	12	ISM	ENSMUSG00000040714.15	ENSMUST00000047170.10	1901	13	329	124	329	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTAGATCGCTCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	19133474	19128488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208
ENSMUSG00000040722.8_57348610_57358676_1	chr9	-	2953	5	ISM	ENSMUSG00000040722.8	ENSMUST00000046587.8	3225	7	16665	0	16665	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	57358676	57348609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638
ENSMUSG00000040722.8_57348610_57358724_1	chr9	-	3001	5	ISM	ENSMUSG00000040722.8	ENSMUST00000046587.8	3225	7	16617	0	16617	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	57358724	57348609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638
ENSMUSG00000040725.14_25421226_25455637_1	chr7	-	2777	15	NNC	ENSMUSG00000040725.14	novel	3249	15	NA	NA	9	30	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTAAGAAGCAAATTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	25455637	25421225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_25421789_25422230_25422418_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25455586
ENSMUSG00000040725.14_25421226_25455637_2	chr7	-	2782	15	FSM	ENSMUSG00000040725.14	ENST00000595018.5	2752	15	9	-39	9	30	multi-exon	FALSE	canonical	NA	NA	NA	NA	2191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTAAGAAGCAAATTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	25455637	25421225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25455586
ENSMUSG00000040725.14_25421268_25425436_1	chr7	-	935	4	ISM	ENSMUSG00000040725.14	ENST00000602130.5	2893	15	28677	12	28677	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAAAAAATTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	25425436	25421267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25421789_25422230_25422267_25423979_25424270_25425348
ENSMUSG00000040725.14_25421325_25425494_1	chr7	-	936	4	ISM	ENSMUSG00000040725.14	ENST00000602130.5	2893	15	28619	69	28619	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGCAGTTGGTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	25425494	25421324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25421789_25422230_25422267_25423979_25424270_25425348
ENSMUSG00000040725.14_25421435_25425599_1	chr7	-	931	4	ISM	ENSMUSG00000040725.14	ENST00000602130.5	2893	15	28514	179	28514	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCCTTCTTAGCTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	25425599	25421434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25421789_25422230_25422267_25423979_25424270_25425348
ENSMUSG00000040725.14_25421546_25426238_1	chr7	-	939	5	ISM	ENSMUSG00000040725.14	ENST00000602130.5	2893	15	27875	290	27875	-281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTCCAGAGGAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	25426238	25421545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25421789_25422230_25422267_25423979_25424270_25425348_25425640_25426159
ENSMUSG00000040725.14_25421665_25432459_1	chr7	-	929	6	ISM	ENSMUSG00000040725.14	ENST00000602130.5	2893	15	21654	409	21654	-400	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCTTCAGAGGCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	25432459	25421664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25421789_25422230_25422267_25423979_25424270_25425348_25425640_25426159_25426329_25432440
ENSMUSG00000040725.14_25421716_25432511_1	chr7	-	930	6	ISM	ENSMUSG00000040725.14	ENST00000602130.5	2893	15	21602	460	21602	-451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTACTCGGGCAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	25432511	25421715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25421789_25422230_25422267_25423979_25424270_25425348_25425640_25426159_25426329_25432440
ENSMUSG00000040725.14_25421772_25424039_1	chr7	-	290	3	ISM	ENSMUSG00000040725.14	ENST00000352456.7	3249	15	31625	965	30074	-507	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTACTATCAGAACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	25424039	25421771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25421789_25422230_25422444_25423979
ENSMUSG00000040725.14_25422252_25432714_1	chr7	-	940	6	ISM	ENSMUSG00000040725.14	ENST00000602130.5	2893	15	21399	996	21399	-987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTATAACCAGTATCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	25432714	25422251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25422267_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668
ENSMUSG00000040725.14_25434030_25453814_1	chr7	-	977	8	ISM	ENSMUSG00000040725.14	ENST00000602130.5	2893	15	299	12774	299	1985	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGATACGGGGCACCATTG	NA	NA	NA	NA	NA	NA	NA	NA	25453814	25434029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ENSMUSG00000040725.14_25440252_25453965_1	chr7	-	908	7	ISM	ENSMUSG00000040725.14	ENSMUST00000108401.3	1240	8	161	4237	148	-4237	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGGCAGCCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	25453965	25440251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ENSMUSG00000040725.14_25440278_25454126_1	chr7	-	1043	7	ISM	ENSMUSG00000040725.14	ENSMUST00000108401.3	1240	8	0	4263	0	-4263	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGATGTGATTGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	25454126	25440277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ENSMUSG00000040725.14_25440347_25454126_1	chr7	-	974	7	ISM	ENSMUSG00000040725.14	ENSMUST00000108401.3	1240	8	0	4332	0	-4332	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATGGAGGCACAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	25454126	25440346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ENSMUSG00000040728.16_11332526_11333028_1	chr4	-	411	2	ISM	ENSMUSG00000040728.16	ENST00000646773.1	3020	15	53528	224	53523	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTAACCAAAGTGAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	11333028	11332525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11332811_11332902
ENSMUSG00000040728.16_11332613_11333061_1	chr4	-	357	2	ISM	ENSMUSG00000040728.16	ENST00000646773.1	3020	15	53495	311	53490	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTTTGGACTTTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	11333061	11332612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11332811_11332902
ENSMUSG00000040728.16_11332681_11333110_1	chr4	-	338	2	ISM	ENSMUSG00000040728.16	ENST00000646773.1	3020	15	53446	379	53441	324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTGTGAGCTGTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	11333110	11332680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11332811_11332902
ENSMUSG00000040728.16_11332902_11344245_1	chr4	-	706	2	ISM	ENSMUSG00000040728.16	ENST00000423620.6	3651	16	42434	969	42306	103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCAGTGCTAAAGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	11344245	11332901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11333474_11344111
ENSMUSG00000040728.16_11333005_11353406_1	chr4	-	732	3	ISM	ENSMUSG00000040728.16	ENST00000423620.6	3651	16	33273	1072	33145	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTAATATTTTCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	11353406	11333004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11333474_11344111_11344263_11353294
ENSMUSG00000040728.16_11333189_11357530_1	chr4	-	525	3	ISM	ENSMUSG00000040728.16	ENST00000646773.1	3020	15	29026	887	29021	-184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGACTTGGAGTAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	11357530	11333188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11333474_11353294_11353464_11357459
ENSMUSG00000040728.16_11333197_11357516_1	chr4	-	642	4	ISM	ENSMUSG00000040728.16	ENST00000423620.6	3651	16	29163	1264	29035	-192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAGTTGAAGACTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	11357516	11333196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11333474_11344111_11344263_11353294_11353464_11357471
ENSMUSG00000040728.16_11333321_11359765_1	chr4	-	549	4	ISM	ENSMUSG00000040728.16	ENST00000646773.1	3020	15	26791	1019	26786	-316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCAGCAAAGCCTTACAAC	NA	NA	NA	NA	NA	NA	NA	NA	11359765	11333320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11333474_11353294_11353464_11357459_11357659_11359737
ENSMUSG00000040728.16_11333379_11359810_1	chr4	-	536	4	ISM	ENSMUSG00000040728.16	ENST00000646773.1	3020	15	26746	1077	26741	-374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCCAACACGATTGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	11359810	11333378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11333474_11353294_11353464_11357459_11357659_11359737
ENSMUSG00000040728.16_11333408_11359844_1	chr4	-	680	5	ISM	ENSMUSG00000040728.16	ENST00000423620.6	3651	16	26835	1475	26707	-403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTACAGTCAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	11359844	11333407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11333474_11344111_11344263_11353294_11353464_11357471_11357659_11359737
ENSMUSG00000040728.16_11333447_11359881_1	chr4	-	539	4	ISM	ENSMUSG00000040728.16	ENST00000646773.1	3020	15	26675	1145	26670	-442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATCAGACAAGAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	11359881	11333446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11333474_11353294_11353464_11357459_11357659_11359737
ENSMUSG00000040728.16_11353386_11359825_1	chr4	-	353	3	ISM	ENSMUSG00000040728.16	ENSMUST00000108310.8	2781	16	26854	20381	26726	-20381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTTGAACCCACGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	11359825	11353385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11353464_11357471_11357659_11359737
ENSMUSG00000040728.16_11353413_11361016_1	chr4	-	532	4	ISM	ENSMUSG00000040728.16	ENST00000646773.1	3020	15	25540	21111	25535	-20408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGCTGCCATTTATCAA	NA	NA	NA	NA	NA	NA	NA	NA	11361016	11353412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11353464_11357459_11357659_11359737_11359957_11360953
ENSMUSG00000040728.16_11353447_11361089_1	chr4	-	571	4	ISM	ENSMUSG00000040728.16	ENST00000646773.1	3020	15	25467	21145	25462	-20442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACATTCCCAGCTCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	11361089	11353446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11353464_11357459_11357659_11359737_11359957_11360953
ENSMUSG00000040728.16_11357586_11361255_1	chr4	-	594	3	ISM	ENSMUSG00000040728.16	ENSMUST00000108310.8	2781	16	25424	24581	25296	-24581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAAAACCATGAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	11361255	11357585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11357659_11359737_11359957_11360953
ENSMUSG00000040728.16_11359831_11365255_1	chr4	-	583	4	ISM	ENSMUSG00000040728.16	ENSMUST00000108310.8	2781	16	21424	26826	21296	-26826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGCTGCCACAATAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	11365255	11359830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11359957_11360953_11361256_11365003_11365047_11365143
ENSMUSG00000040728.16_11359923_11365447_1	chr4	-	586	5	ISM	ENSMUSG00000040728.16	ENSMUST00000108310.8	2781	16	21232	26918	21104	-26918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCCAACCCCTCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	11365447	11359922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11359957_11360953_11361256_11365003_11365047_11365143_11365277_11365373
ENSMUSG00000040731.14_134649968_134654459_1	chr5	-	835	4	ISM	ENSMUSG00000040731.14	ENSMUST00000036125.10	2367	6	13742	1237	13742	-1237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCATGTCGAGTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	134654459	134649967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_134650503_134650802_134650941_134654219_134654317_134654394
ENSMUSG00000040731.14_134650154_134656562_1	chr5	-	763	5	NNC	ENSMUSG00000040731.14	novel	2367	6	NA	NA	11639	-1423	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTGTTTTCTTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	134656562	134650153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_134650503_134650802_134650934_134654219_134654317_134654394_134654460_134656441
ENSMUSG00000040731.14_134650154_134656562_2	chr5	-	770	5	ISM	ENSMUSG00000040731.14	ENSMUST00000036125.10	2367	6	11639	1423	11639	-1423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTGTTTTCTTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	134656562	134650153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_134650503_134650802_134650941_134654219_134654317_134654394_134654460_134656441
ENSMUSG00000040731.14_134650266_134668156_1	chr5	-	787	6	FSM	ENSMUSG00000040731.14	ENSMUST00000036125.10	2367	6	45	1535	45	-1535	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTCCTTACAGCGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	134668156	134650265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_134650503_134650802_134650941_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ENSMUSG00000040731.14_134650276_134654236_1	chr5	-	442	4	ISM	ENSMUSG00000040731.14	ENSMUST00000202622.4	2726	7	14108	1701	13965	-1545	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCACTGTCCTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	134654236	134650275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_134650503_134650802_134650941_134653294_134653355_134654219
ENSMUSG00000040731.14_134650474_134656481_1	chr5	-	429	6	ISM	ENSMUSG00000040731.14	ENSMUST00000202622.4	2726	7	11863	1899	11720	-1743	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAACCTCGGACAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	134656481	134650473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_134650503_134650802_134650941_134653294_134653355_134654219_134654317_134654394_134654460_134656441
ENSMUSG00000040731.14_134653294_134668156_1	chr5	-	473	5	ISM	ENSMUSG00000040731.14	ENSMUST00000202622.4	2726	7	188	4719	45	-4563	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGTATTTAACATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	134668156	134653293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_134653355_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ENSMUSG00000040732.21_95160032_95190907_1	chr16	-	2523	8	FSM	ENSMUSG00000040732.21	ENST00000398897.5	2525	8	-1	3	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGGTGGTAGTCTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	95190907	95160031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_95160717_95160961_95162186_95169510_95169559_95170180_95170238_95170853_95170923_95179970_95180052_95180926_95181131_95190752
ENSMUSG00000040732.21_95160032_95190907_2	chr16	-	2521	8	NNC	ENSMUSG00000040732.21	novel	2525	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGGTGGTAGTCTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	95190907	95160031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_95160717_95160961_95162186_95169510_95169559_95170180_95170238_95170853_95170923_95179970_95180052_95180926_95181131_95190754
ENSMUSG00000040732.21_95160032_95190907_3	chr16	-	2520	8	NNC	ENSMUSG00000040732.21	novel	2525	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGGTGGTAGTCTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	95190907	95160031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_95160714_95160961_95162186_95169510_95169559_95170180_95170238_95170853_95170923_95179970_95180052_95180926_95181131_95190752
ENSMUSG00000040732.21_95160192_95210686_1	chr16	-	2453	9	FSM	ENSMUSG00000040732.21	ENST00000398911.5	2743	9	127	163	127	-160	multi-exon	FALSE	canonical	NA	NA	NA	NA	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	NA	NA	NA	NA	NA	NA	NA	NA	95210686	95160191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_95160717_95160961_95162186_95169510_95169559_95170180_95170238_95170853_95170923_95179970_95180052_95180926_95181131_95190752_95190905_95210593
ENSMUSG00000040732.21_95160217_95210704_1	chr16	-	2443	9	NNC	ENSMUSG00000040732.21	novel	2743	9	NA	NA	109	-185	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGACACACCACACACAAA	NA	NA	NA	NA	NA	NA	NA	NA	95210704	95160216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_95160714_95160961_95162186_95169510_95169559_95170180_95170238_95170853_95170923_95179970_95180052_95180926_95181131_95190752_95190905_95210593
ENSMUSG00000040732.21_95160259_95210745_1	chr16	-	2445	9	FSM	ENSMUSG00000040732.21	ENST00000398911.5	2743	9	68	230	68	-227	multi-exon	FALSE	canonical	NA	NA	NA	NA	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTATGCATTTATACAC	NA	NA	NA	NA	NA	NA	NA	NA	95210745	95160258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_95160717_95160961_95162186_95169510_95169559_95170180_95170238_95170853_95170923_95179970_95180052_95180926_95181131_95190752_95190905_95210593
ENSMUSG00000040732.21_95160296_95210809_1	chr16	-	2472	9	FSM	ENSMUSG00000040732.21	ENST00000398911.5	2743	9	4	267	4	-264	multi-exon	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAATGGGTTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	95210809	95160295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_95160717_95160961_95162186_95169510_95169559_95170180_95170238_95170853_95170923_95179970_95180052_95180926_95181131_95190752_95190905_95210593
ENSMUSG00000040732.21_95161069_95180035_1	chr16	-	1359	5	ISM	ENSMUSG00000040732.21	ENSMUST00000233664.2	3062	9	80127	1037	10871	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAAACTGTGAAGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	95180035	95161068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_95162186_95169510_95169559_95170180_95170238_95178159_95178232_95179970
ENSMUSG00000040732.21_95161201_95181060_1	chr16	-	1377	6	ISM	ENSMUSG00000040732.21	ENSMUST00000233664.2	3062	9	79102	1169	9846	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAGAAGCAGACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	95181060	95161200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_95162186_95169510_95169559_95170180_95170238_95178159_95178232_95179970_95180052_95180926
ENSMUSG00000040732.21_95161504_95386382_1	chr16	-	1849	12	FSM	ENSMUSG00000040732.21	ENST00000398919.6	1785	12	0	-64	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGTGCCACCCAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	95386382	95161503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_95162186_95169510_95169559_95170180_95170238_95170853_95170923_95178159_95178232_95179970_95180052_95180926_95181131_95190752_95190905_95210593_95210812_95325385_95325474_95331122_95331225_95386306
ENSMUSG00000040732.21_95161665_95260162_1	chr16	-	1429	9	FSM	ENSMUSG00000040732.21	ENSMUST00000233664.2	3062	9	0	1633	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCAGATGGAGGCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	95260162	95161664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_95162186_95169510_95169559_95170180_95170238_95178159_95178232_95179970_95180052_95180926_95181131_95190752_95190905_95210593_95210812_95260086
ENSMUSG00000040734.15_19095141_19105190_1	chr7	+	1088	7	ISM	ENSMUSG00000040734.15	ENSMUST00000047621.14	3130	13	0	7268	0	-4626	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTTCTGACGTTGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	19095140	19105190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_19095242_19102466_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129
ENSMUSG00000040734.15_19102651_19105335_1	chr7	+	1042	5	ISM	ENSMUSG00000040734.15	ENST00000360957.10	2338	11	7489	4481	7489	-4481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTCAGTATGATCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	19102650	19105335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129
ENSMUSG00000040734.15_19102716_19105371_1	chr7	+	1013	5	ISM	ENSMUSG00000040734.15	ENST00000360957.10	2338	11	7554	4445	7554	-4445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGAACATGGAGCCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	19102715	19105371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129
ENSMUSG00000040734.15_19103777_19105523_1	chr7	+	1038	4	ISM	ENSMUSG00000040734.15	ENST00000360957.10	2338	11	8615	4293	8615	-4293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCAGACTCCAGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	19103776	19105523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_19104230_19104313_19104413_19104490_19104583_19105129
ENSMUSG00000040734.15_19104069_19107054_1	chr7	+	1000	5	ISM	ENSMUSG00000040734.15	ENST00000360957.10	2338	11	8907	2762	8907	-2762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAACGCAGAGGCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	19104068	19107054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848
ENSMUSG00000040734.15_19104308_19107309_1	chr7	+	1100	4	ISM	ENSMUSG00000040734.15	ENST00000360957.10	2338	11	9146	2507	9146	-2507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCATAGGAGGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	19104307	19107309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_19104413_19104490_19104583_19105129_19105572_19106848
ENSMUSG00000040734.15_19104491_19109306_1	chr7	+	1127	4	ISM	ENSMUSG00000040734.15	ENST00000360957.10	2338	11	9329	510	9329	-510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCGTCCCTTCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	19104490	19109306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_19104583_19105129_19105572_19106848_19107310_19109174
ENSMUSG00000040734.15_19105128_19109306_1	chr7	+	1037	3	ISM	ENSMUSG00000040734.15	ENST00000360957.10	2338	11	9966	510	9966	-510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCGTCCCTTCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	19105127	19109306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_19105572_19106848_19107310_19109174
ENSMUSG00000040734.15_19105366_19109816_1	chr7	+	1100	5	ISM	ENSMUSG00000040734.15	ENST00000360957.10	2338	11	10204	0	10204	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGAGGCTGAAGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	19105365	19109816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649
ENSMUSG00000040738.11_11203776_11216550_1	chr4	-	1240	7	ISM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	37708	-607	37608	607	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTGCCTTACTGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	11216550	11203775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456
ENSMUSG00000040738.11_11204110_11221214_1	chr4	-	1186	11	ISM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	33044	-273	32944	273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATTTAATATTTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	11221214	11204109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112
ENSMUSG00000040738.11_11204110_11221282_1	chr4	-	1254	11	ISM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	32976	-273	32876	273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATTTAATATTTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	11221282	11204109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112
ENSMUSG00000040738.11_11204384_11225685_1	chr4	-	1201	13	ISM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	28573	1	28473	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGTACAATTTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	11225685	11204383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601
ENSMUSG00000040738.11_11204384_11225759_1	chr4	-	1275	13	ISM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	28499	1	28399	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGTACAATTTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	11225759	11204383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601
ENSMUSG00000040738.11_11223799_11241626_1	chr4	-	1228	10	ISM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	12632	19416	12532	-19416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTTTATTTCAGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	11241626	11223798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580
ENSMUSG00000040738.11_11228915_11248281_1	chr4	-	1242	11	ISM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	5977	24532	5877	-24532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATTTTAATTGAATTGC	NA	NA	NA	NA	NA	NA	NA	NA	11248281	11228914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170
ENSMUSG00000040746.16_70538113_70540358_1	chr11	+	961	4	ISM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	0	1889	0	-1814	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGAAGAAGCCTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	70538112	70540358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270
ENSMUSG00000040746.16_70538232_70540591_1	chr11	+	933	5	ISM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	119	1656	-38	-1581	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACGCATGCTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	70538231	70540591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500
ENSMUSG00000040746.16_70538381_70541917_1	chr11	+	999	10	NNC	ENSMUSG00000040746.16	novel	1366	10	NA	NA	111	-255	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCACTCCTGGGCTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	70538380	70541917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_70538425_70538660_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ENSMUSG00000040746.16_70538381_70541917_2	chr11	+	997	10	NNC	ENSMUSG00000040746.16	novel	1366	10	NA	NA	111	-255	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCACTCCTGGGCTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	70538380	70541917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_70538422_70538659_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ENSMUSG00000040746.16_70538381_70541917_3	chr11	+	1000	10	FSM	ENSMUSG00000040746.16	ENST00000572430.5	1366	10	111	255	111	-255	multi-exon	FALSE	canonical	NA	NA	NA	NA	1568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCACTCCTGGGCTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	70538380	70541917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70538425_70538659_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ENSMUSG00000040746.16_70538395_70541608_1	chr11	+	989	8	ISM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	282	639	125	-564	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATCTGTCTGGATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	70538394	70541608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589
ENSMUSG00000040746.16_70538521_70541629_1	chr11	+	884	8	ISM	ENSMUSG00000040746.16	ENST00000572430.5	1366	10	251	543	251	-543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGATGGGGACAAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	70538520	70541629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589
ENSMUSG00000040746.16_70538901_70542100_1	chr11	+	974	8	ISM	ENSMUSG00000040746.16	ENST00000572430.5	1366	10	631	72	631	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCTGAGGGTGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	70538900	70542100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ENSMUSG00000040746.16_70540269_70542236_1	chr11	+	951	6	ISM	ENSMUSG00000040746.16	ENST00000572430.5	1366	10	1999	-64	1999	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAAAAGGTTAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	70540268	70542236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ENSMUSG00000040749.12_162854647_162859117_1	chrX	-	837	4	FSM	ENSMUSG00000040749.12	ENSMUST00000037928.9	1783	4	0	946	0	-946	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCCACCTGATGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	162859117	162854646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859010
ENSMUSG00000040759.10_55174128_55175514_1	chr14	+	276	2	ISM	ENSMUSG00000040759.10	ENST00000339180.9	789	5	207	857	174	-857	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTCTCCCACCCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	55174127	55175514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55174241_55175351
ENSMUSG00000040759.10_55176037_55176371_1	chr14	+	158	2	ISM	ENSMUSG00000040759.10	ENST00000339180.9	789	5	2116	0	2083	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGCCCAGTACCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	55176036	55176371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_55176132_55176308
ENSMUSG00000040767.11_32155415_32158989_1	chr11	+	819	5	NNC	ENSMUSG00000040767.11	novel	821	5	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAAGCCATAGTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	32155414	32158989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_32155664_32156959_32157044_32157556_32157663_32158333_32158409_32158684
ENSMUSG00000040770.6_55170293_55173294_1	chr14	+	1124	2	FSM	ENSMUSG00000040770.6	ENST00000329715.2	1291	2	167	0	141	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTATTTGTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	55170292	55173294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_55170683_55172560
ENSMUSG00000040770.6_55170293_55173294_2	chr14	+	1115	2	NNC	ENSMUSG00000040770.6	novel	1291	2	NA	NA	141	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTATTTGTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	55170292	55173294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_55170683_55172569
ENSMUSG00000040771.15_48717885_48723797_1	chr17	+	279	3	FSM	ENSMUSG00000040771.15	ENST00000482515.5	370	3	30	61	30	-61	multi-exon	FALSE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTACACACTCTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	48717884	48723797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_48717933_48718291_48718437_48723711
ENSMUSG00000040771.15_48718292_48723859_1	chr17	+	287	2	NNC	ENSMUSG00000040771.15	novel	370	3	NA	NA	437	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGCTGTGGGACTAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	48718291	48723859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_48718431_48723711
ENSMUSG00000040771.15_48718292_48723859_2	chr17	+	292	2	NNC	ENSMUSG00000040771.15	novel	370	3	NA	NA	437	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGCTGTGGGACTAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	48718291	48723859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_48718437_48723712
ENSMUSG00000040774.16_106410446_106411868_1	chr3	-	642	2	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	43030	147	43030	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTGTATATTGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	106411868	106410445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_106411061_106411841
ENSMUSG00000040774.16_106410548_106412540_1	chr3	-	714	3	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	42358	249	42358	-249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGATGTTCTTTTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	106412540	106410547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_106411061_106411841_106411968_106412465
ENSMUSG00000040774.16_106410666_106413090_1	chr3	-	734	4	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	41808	367	41808	-367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGGAGCACATCCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	106413090	106410665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036
ENSMUSG00000040774.16_106410923_106438480_1	chr3	-	668	6	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	16418	624	16418	-624	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGCTCATGGTTCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	106438480	106410922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452
ENSMUSG00000040774.16_106410981_106438523_1	chr3	-	653	6	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	16375	682	16375	-682	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATTAAAGCCTCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	106438523	106410980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452
ENSMUSG00000040774.16_106411036_106438571_1	chr3	-	646	6	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	16327	737	16327	-737	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTGTGTCAGTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	106438571	106411035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452
ENSMUSG00000040774.16_106411842_106440818_1	chr3	-	792	6	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	14080	1543	14080	-1543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATTGTACTCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	106440818	106411841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670
ENSMUSG00000040774.16_106412570_106446661_1	chr3	-	718	6	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	8237	2271	8237	-2271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATCTACAAGAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	106446661	106412569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505
ENSMUSG00000040774.16_106413104_106446774_1	chr3	-	709	5	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	8124	2805	8124	-2805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTACAAATTACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	106446774	106413103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505
ENSMUSG00000040774.16_106420119_106446912_1	chr3	-	782	4	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	7986	9820	7986	-9820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTCCGTTCACATCGTG	NA	NA	NA	NA	NA	NA	NA	NA	106446912	106420118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_106420204_106438452_106438595_106440670_106440819_106446505
ENSMUSG00000040774.16_106438453_106446912_1	chr3	-	697	3	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	7986	28154	7986	-28154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAATACTTAATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	106446912	106438452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_106438595_106440670_106440819_106446505
ENSMUSG00000040774.16_106438453_106455015_1	chr3	-	717	4	ISM	ENSMUSG00000040774.16	ENST00000357172.9	2155	9	65	28263	32	-28154	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAATACTTAATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	106455015	106438452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_106438595_106440670_106440819_106446505_106446913_106454995
ENSMUSG00000040774.16_106438453_106455015_2	chr3	-	724	4	ISM	ENSMUSG00000040774.16	ENSMUST00000039153.14	2020	9	32	28154	32	-28154	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAATACTTAATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	106455015	106438452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_106438595_106440670_106440819_106446505_106446920_106454995
ENSMUSG00000040785.20_94186198_94192965_1	chr16	+	452	5	FSM	ENSMUSG00000040785.20	ENST00000621658.1	452	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGTAAGAGCAAAGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	94186197	94192965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_94186297_94188195_94188250_94189123_94189245_94191060_94191147_94192873
ENSMUSG00000040795.13_129510029_129511221_1	chr4	-	1016	2	ISM	ENSMUSG00000040795.13	ENSMUST00000046675.12	2639	5	1671	1110	1668	-1110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAGCTGGTACGATAGG	NA	NA	NA	NA	NA	NA	NA	NA	129511221	129510028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129510974_129511150
ENSMUSG00000040795.13_129510258_129511648_1	chr4	-	1009	3	ISM	ENSMUSG00000040795.13	ENSMUST00000046675.12	2639	5	1244	1339	1241	-1339	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCACTGGAGAACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	129511648	129510257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129510974_129511150_129511252_129511456
ENSMUSG00000040795.13_129510512_129512873_1	chr4	-	1027	5	FSM	ENSMUSG00000040795.13	ENSMUST00000046675.12	2639	5	19	1593	16	1380	multi-exon	TRUE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTGAAAATCAAAATATTGA	NA	NA	NA	NA	NA	NA	NA	NA	129512873	129510511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
ENSMUSG00000040797.17_121356785_121387734_1	chr6	-	1207	10	ISM	ENSMUSG00000040797.17	ENST00000382841.2	2400	12	33465	0	33465	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCACCCTTCCAGCGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	121387734	121356784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_121356869_121356953_121357004_121358607_121358701_121360873_121361036_121361160_121361261_121363531_121363658_121364692_121364833_121366425_121366593_121366958_121367082_121387572
ENSMUSG00000040797.17_121358608_121389619_1	chr6	-	1226	9	ISM	ENSMUSG00000040797.17	ENST00000382841.2	2400	12	31580	1823	31580	-1823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGACTGGGCTCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	121389619	121358607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_121358701_121360873_121361036_121361160_121361261_121363531_121363658_121364692_121364833_121366425_121366593_121366958_121367082_121387572_121387735_121389466
ENSMUSG00000040797.17_121361161_121389759_1	chr6	-	1111	7	ISM	ENSMUSG00000040797.17	ENST00000382841.2	2400	12	31440	4376	31440	-4376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCCCCCCCTCCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	121389759	121361160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_121361261_121363531_121363658_121364692_121364833_121366425_121366593_121366958_121367082_121387572_121387735_121389466
ENSMUSG00000040797.17_121363561_121389913_1	chr6	-	1136	6	ISM	ENSMUSG00000040797.17	ENST00000382841.2	2400	12	31286	6776	31286	-6776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTCCTCTTCAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	121389913	121363560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_121363658_121364692_121364833_121366425_121366593_121366958_121367082_121387572_121387735_121389466
ENSMUSG00000040797.17_121364722_121390015_1	chr6	-	1112	5	ISM	ENSMUSG00000040797.17	ENST00000382841.2	2400	12	31184	7937	31184	-7937	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGTCCATCGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	121390015	121364721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_121364833_121366425_121366593_121366958_121367082_121387572_121387735_121389466
ENSMUSG00000040797.17_121364776_121390062_1	chr6	-	1105	5	ISM	ENSMUSG00000040797.17	ENST00000382841.2	2400	12	31137	7991	31137	-7991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAGCAAAAGGAGCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	121390062	121364775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_121364833_121366425_121366593_121366958_121367082_121387572_121387735_121389466
ENSMUSG00000040797.17_121366526_121390215_1	chr6	-	1101	4	ISM	ENSMUSG00000040797.17	ENST00000382841.2	2400	12	30984	9741	30984	-9741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCTTTGCCATCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	121390215	121366525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_121366593_121366958_121367082_121387572_121387735_121389466
ENSMUSG00000040797.17_121366567_121390276_1	chr6	-	1121	4	ISM	ENSMUSG00000040797.17	ENST00000382841.2	2400	12	30923	9782	30923	-9782	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGTGCAACAGTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	121390276	121366566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_121366593_121366958_121367082_121387572_121387735_121389466
ENSMUSG00000040797.17_121367035_121390389_1	chr6	-	1132	3	ISM	ENSMUSG00000040797.17	ENST00000382841.2	2400	12	30810	10250	30810	-10250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGGAAGTTTCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	121390389	121367034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_121367082_121387572_121387735_121389466
ENSMUSG00000040797.17_121387626_121390495_1	chr6	-	1138	2	ISM	ENSMUSG00000040797.17	ENST00000382841.2	2400	12	30704	30841	30704	-5840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAGAGTTCCTGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	121390495	121387625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_121387735_121389466
ENSMUSG00000040797.17_121387696_121390526_1	chr6	-	1099	2	ISM	ENSMUSG00000040797.17	ENST00000382841.2	2400	12	30673	30911	30673	-5910	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCCCTGACACCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	121390526	121387695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_121387735_121389466
ENSMUSG00000040797.17_121389534_121421177_1	chr6	-	1104	2	ISM	ENSMUSG00000040797.17	ENST00000382841.2	2400	12	22	32749	22	-7748	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCACGCTCTCCACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	121421177	121389533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_121390576_121421115
ENSMUSG00000040813.17_106535945_106550797_1	chr9	-	813	3	ISM	ENSMUSG00000040813.17	ENSMUST00000169068.8	1364	6	12084	0	8567	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTGGTTTTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	106550797	106535944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106536507_106539558_106539728_106550715
ENSMUSG00000040813.17_106535945_106559363_1	chr9	-	1028	3	FSM	ENSMUSG00000040813.17	ENST00000614067.4	1028	3	1	-1	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTGGTTTTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	106559363	106535944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_106536507_106539558_106539728_106559066
ENSMUSG00000040813.17_106535945_106562501_1	chr9	-	1375	6	FSM	ENSMUSG00000040813.17	ENSMUST00000163441.8	1896	6	521	0	380	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTGGTTTTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	106562501	106535944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562442
ENSMUSG00000040813.17_106536191_106562881_1	chr9	-	1509	6	FSM	ENSMUSG00000040813.17	ENSMUST00000163441.8	1896	6	141	246	0	-240	multi-exon	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAACTGAGCAAACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	106562881	106536190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562442
ENSMUSG00000040813.17_106536247_106559183_1	chr9	-	768	4	ISM	ENSMUSG00000040813.17	ENSMUST00000169068.8	1364	6	3698	302	181	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAGAGGGGTGAGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	106559183	106536246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066
ENSMUSG00000040813.17_106536436_106562881_1	chr9	-	873	6	FSM	ENSMUSG00000040813.17	ENSMUST00000169068.8	1364	6	0	491	0	-485	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTCTCCTGGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	106562881	106536435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562833
ENSMUSG00000040813.17_106536436_106563022_1	chr9	-	1405	6	FSM	ENSMUSG00000040813.17	ENSMUST00000163441.8	1896	6	0	491	0	-485	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTCTCCTGGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	106563022	106536435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562442
ENSMUSG00000040813.17_106539589_106563102_1	chr9	-	793	5	ISM	ENSMUSG00000040813.17	ENSMUST00000046735.11	1391	6	12	3638	12	-3638	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCACTGACACCCAGACG	NA	NA	NA	NA	NA	NA	NA	NA	106563102	106539588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106563033
ENSMUSG00000040822.8_54923694_54927866_1	chr14	+	1490	2	FSM	ENSMUSG00000040822.8	ENSMUST00000038539.8	1843	2	21	332	21	-118	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGCGAGACCCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	54923693	54927866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_54924578_54927260
ENSMUSG00000040822.8_54923981_54927984_1	chr14	+	1321	2	FSM	ENSMUSG00000040822.8	ENSMUST00000038539.8	1843	2	308	214	308	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTACAGGAGATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	54923980	54927984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_54924578_54927260
ENSMUSG00000040822.8_54924121_54928198_1	chr14	+	1395	2	FSM	ENSMUSG00000040822.8	ENSMUST00000038539.8	1843	2	448	0	-380	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACTGGTGATTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	54924120	54928198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_54924578_54927260
ENSMUSG00000040824.4_18885182_18886457_1	chr7	+	225	2	FSM	ENSMUSG00000040824.4	ENST00000590212.1	382	2	39	118	39	-118	multi-exon	FALSE	canonical	NA	NA	NA	NA	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGCAAGGGCAAGAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	18885181	18886457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_18885323_18886373
ENSMUSG00000040824.4_18885234_18886506_1	chr7	+	222	2	FSM	ENSMUSG00000040824.4	ENST00000590212.1	382	2	91	69	91	-69	multi-exon	FALSE	canonical	NA	NA	NA	NA	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGATGTTCCTGCGCGG	NA	NA	NA	NA	NA	NA	NA	NA	18885233	18886506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_18885323_18886373
ENSMUSG00000040824.4_18885280_18886561_1	chr7	+	231	2	FSM	ENSMUSG00000040824.4	ENST00000590212.1	382	2	137	14	137	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCTGGCAAGTAGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	18885279	18886561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_18885323_18886373
ENSMUSG00000040836.16_165109504_165149366_1	chr1	+	1865	6	FSM	ENSMUSG00000040836.16	ENST00000682931.1	1922	6	2	55	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGGAAGGAAACATCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	165109503	165149366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_165109642_165133746_165134162_165137837_165138563_165144808_165144914_165146317_165146438_165149004
ENSMUSG00000040836.16_165109551_165149391_1	chr1	+	1843	6	FSM	ENSMUSG00000040836.16	ENST00000682931.1	1922	6	49	30	49	25	multi-exon	FALSE	canonical	NA	NA	NA	NA	1937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGAGGATTGAAAATACT	NA	NA	NA	NA	NA	NA	NA	NA	165109550	165149391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_165109642_165133746_165134162_165137837_165138563_165144808_165144914_165146317_165146438_165149004
ENSMUSG00000040836.16_165138459_165149116_1	chr1	+	441	4	ISM	ENSMUSG00000040836.16	ENSMUST00000111450.3	6862	6	8267	5198	8267	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGAGGAGGCTCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	165138458	165149116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_165138563_165144808_165144914_165146317_165146438_165149004
ENSMUSG00000040842.18_140840832_140845893_1	chr4	-	2400	2	ISM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	21184	520	21184	-520	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAACCGCTTCCCATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	140845893	140840831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_140843176_140845837
ENSMUSG00000040842.18_140840871_140845959_1	chr4	-	2427	2	ISM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	21118	559	21118	-559	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCTGGACCCCACGAG	NA	NA	NA	NA	NA	NA	NA	NA	140845959	140840870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_140843176_140845837
ENSMUSG00000040842.18_140840937_140846019_1	chr4	-	2421	2	ISM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	21058	625	21058	-625	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGGGCAGGAACCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	140846019	140840936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_140843176_140845837
ENSMUSG00000040842.18_140841063_140847684_1	chr4	-	2418	3	ISM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	19393	751	19393	-751	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTGTTTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	140847684	140841062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_140843176_140845837_140846093_140847634
ENSMUSG00000040842.18_140842813_140867198_1	chr4	-	864	4	FSM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	-121	2501	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTAGGGGAGCCTACCAA	NA	NA	NA	NA	NA	NA	NA	NA	140867198	140842812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_140843176_140845837_140846093_140847634_140847685_140867002
ENSMUSG00000040842.18_140842813_140867198_2	chr4	-	852	4	NNC	ENSMUSG00000040842.18	novel	861	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTAGGGGAGCCTACCAA	NA	NA	NA	NA	NA	NA	NA	NA	140867198	140842812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_140843167_140845837_140846090_140847634_140847685_140867002
ENSMUSG00000040843.11_165043408_165055116_1	chr1	-	376	5	ISM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	9396	3553	9396	-3553	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATTTACCAATTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	165055116	165043407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073
ENSMUSG00000040843.11_165047709_165055910_1	chr1	-	361	4	ISM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	8602	7854	8602	-7854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGCTCATCAGAATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	165055910	165047708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_165047764_165050097_165050230_165055073_165055174_165055836
ENSMUSG00000040843.11_165050192_165064359_1	chr1	-	379	4	ISM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	153	10337	153	-10337	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGCCAGAGAACAGATTA	NA	NA	NA	NA	NA	NA	NA	NA	165064359	165050191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_165050230_165055073_165055174_165055836_165056017_165064298
ENSMUSG00000040848.12_165005014_165021933_1	chr1	-	2353	8	FSM	ENSMUSG00000040848.12	ENSMUST00000043338.10	5535	8	74	3108	46	-3108	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGATGGTATAGCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	165021933	165005013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
ENSMUSG00000040848.12_165011392_165021933_2	chr1	-	388	5	NNC	ENSMUSG00000040848.12	novel	439	5	NA	NA	46	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACATCAGTGTCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	165021933	165011391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_165011452_165011538_165011575_165015537_165015624_165015822_165015904_165021808
ENSMUSG00000040848.12_165011392_165021933_3	chr1	-	394	5	FSM	ENSMUSG00000040848.12	ENST00000367829.5	439	5	46	-1	46	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACATCAGTGTCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	165021933	165011391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_165011452_165011538_165011575_165015537_165015624_165015816_165015904_165021808
ENSMUSG00000040848.12_165011392_165021933_4	chr1	-	387	5	NNC	ENSMUSG00000040848.12	novel	439	5	NA	NA	46	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACATCAGTGTCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	165021933	165011391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_165011452_165011538_165011575_165015537_165015624_165015816_165015904_165021815
ENSMUSG00000040848.12_165011392_165021933_5	chr1	-	389	5	NNC	ENSMUSG00000040848.12	novel	439	5	NA	NA	46	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACATCAGTGTCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	165021933	165011391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_165011443_165011534_165011575_165015537_165015624_165015816_165015904_165021808
ENSMUSG00000040848.12_165011392_165021933_6	chr1	-	389	5	NNC	ENSMUSG00000040848.12	novel	439	5	NA	NA	46	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACATCAGTGTCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	165021933	165011391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_165011452_165011538_165011575_165015537_165015624_165015816_165015895_165021804
ENSMUSG00000040857.16_24944277_24945091_1	chr7	-	713	2	ISM	ENSMUSG00000040857.16	ENST00000440177.6	2067	4	4574	939	4574	595	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGGCACCGGAGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	24945091	24944276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_24944957_24945058
ENSMUSG00000040857.16_24944325_24945155_1	chr7	-	729	2	ISM	ENSMUSG00000040857.16	ENST00000440177.6	2067	4	4510	987	4510	547	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGGTGGTGCCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	24945155	24944324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_24944957_24945058
ENSMUSG00000040857.16_24944499_24945658_1	chr7	-	720	3	ISM	ENSMUSG00000040857.16	ENST00000440177.6	2067	4	4007	1161	4007	373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCTCACCCACGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	24945658	24944498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_24944957_24945058_24945175_24945512
ENSMUSG00000040857.16_24944641_24949613_1	chr7	-	712	4	FSM	ENSMUSG00000040857.16	ENST00000440177.6	2067	4	52	1303	52	231	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCCGTGTCTATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	24949613	24944640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_24944957_24945058_24945175_24945512_24945748_24949568
ENSMUSG00000040859.15_129355374_129378933_1	chr4	+	1365	10	ISM	ENSMUSG00000040859.15	ENSMUST00000048162.10	2823	11	0	3358	0	-2082	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAGGTCTAACTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	129355373	129378933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129355499_129355734_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829
ENSMUSG00000040859.15_129355734_129360651_1	chr4	+	267	3	ISM	ENSMUSG00000040859.15	ENST00000446293.6	1501	11	262	20364	258	-20364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGTTATCCGACTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	129355733	129360651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129355796_129359022_129359140_129360563
ENSMUSG00000040859.15_129355746_129381314_1	chr4	+	1597	9	ISM	ENSMUSG00000040859.15	ENST00000341071.11	2539	10	270	908	270	299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTCCTGACCCAATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	129355745	129381314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129355796_129359022_129359140_129360563_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129367942_129380797
ENSMUSG00000040859.15_129359021_129381015_1	chr4	+	1363	9	ISM	ENSMUSG00000040859.15	ENSMUST00000048162.10	2823	11	3647	1276	3545	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTCTGCTCACACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	129359020	129381015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ENSMUSG00000040859.15_129360589_129381482_1	chr4	+	1573	7	ISM	ENSMUSG00000040859.15	ENST00000341071.11	2539	10	5113	740	5113	467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGCCGGGATATCCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	129360588	129381482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129367942_129380797
ENSMUSG00000040859.15_129360720_129381599_1	chr4	+	1559	7	ISM	ENSMUSG00000040859.15	ENST00000341071.11	2539	10	5244	623	5244	584	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGAGCCACTTTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	129360719	129381599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129367942_129380797
ENSMUSG00000040859.15_129365769_129381748_1	chr4	+	1540	5	ISM	ENSMUSG00000040859.15	ENST00000341071.11	2539	10	10293	474	10293	-474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCCAGCTTCTCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	129365768	129381748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129365836_129366216_129366286_129366490_129366570_129367567_129367942_129380797
ENSMUSG00000040859.15_129367625_129381568_1	chr4	+	1253	3	ISM	ENSMUSG00000040859.15	ENST00000446293.6	1501	11	12153	-553	12149	553	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGTATTTCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	129367624	129381568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129368039_129378829_129378934_129380833
ENSMUSG00000040859.15_129367652_129382047_1	chr4	+	1540	2	ISM	ENSMUSG00000040859.15	ENST00000341071.11	2539	10	12176	175	12176	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGGGATGGGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	129367651	129382047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129367942_129380797
ENSMUSG00000040859.15_129367734_129382133_1	chr4	+	1544	2	ISM	ENSMUSG00000040859.15	ENST00000341071.11	2539	10	12258	89	12258	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCCCCAGAGTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	129367733	129382133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129367942_129380797
ENSMUSG00000040859.15_129367798_129382291_1	chr4	+	1638	2	ISM	ENSMUSG00000040859.15	ENST00000341071.11	2539	10	12322	-69	12322	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGAAGTGTCCGGGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	129367797	129382291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129367942_129380797
ENSMUSG00000040866.14_18791462_18799662_1	chr7	+	667	2	ISM	ENSMUSG00000040866.14	ENST00000600188.5	1561	5	54	8543	54	-8543	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGCACGTGACGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	18791461	18799662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_18791698_18799231
ENSMUSG00000040866.14_18791551_18799742_1	chr7	+	658	2	ISM	ENSMUSG00000040866.14	ENST00000600188.5	1561	5	143	8463	143	-8463	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCAGCTATCCGCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	18791550	18799742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_18791698_18799231
ENSMUSG00000040866.14_18791612_18799783_1	chr7	+	638	2	ISM	ENSMUSG00000040866.14	ENST00000600188.5	1561	5	204	8422	204	-8422	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGCGCGCAGATTGCGCG	NA	NA	NA	NA	NA	NA	NA	NA	18791611	18799783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_18791698_18799231
ENSMUSG00000040866.14_18799430_18801062_1	chr7	+	616	2	ISM	ENSMUSG00000040866.14	ENST00000600188.5	1561	5	8022	7143	8022	-7143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAGGGGAGGAGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	18799429	18801062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_18799997_18801013
ENSMUSG00000040866.14_18799463_18801130_1	chr7	+	651	2	ISM	ENSMUSG00000040866.14	ENST00000600188.5	1561	5	8055	7075	8055	-7075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGACTCCGCTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	18799462	18801130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_18799997_18801013
ENSMUSG00000040866.14_18799601_18802029_1	chr7	+	612	3	ISM	ENSMUSG00000040866.14	ENST00000600188.5	1561	5	8193	6176	8193	-6176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGCTCCAACCTCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	18799600	18802029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_18799997_18801013_18801159_18801958
ENSMUSG00000040866.14_18799730_18808048_1	chr7	+	616	4	ISM	ENSMUSG00000040866.14	ENST00000600188.5	1561	5	8322	157	8322	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACCCCAGCGGCCCCGAA	NA	NA	NA	NA	NA	NA	NA	NA	18799729	18808048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_18799997_18801013_18801159_18801958_18802077_18807962
ENSMUSG00000040866.14_18799779_18808104_1	chr7	+	623	4	ISM	ENSMUSG00000040866.14	ENST00000600188.5	1561	5	8371	101	8371	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCCTGAAGGCTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	18799778	18808104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_18799997_18801013_18801159_18801958_18802077_18807962
ENSMUSG00000040866.14_18799866_18808205_1	chr7	+	637	4	ISM	ENSMUSG00000040866.14	ENST00000600188.5	1561	5	8458	0	8458	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCCTTCCCATAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	18799865	18808205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_18799997_18801013_18801159_18801958_18802077_18807962
ENSMUSG00000040875.13_114807637_115045880_1	chr9	+	1432	7	ISM	ENSMUSG00000040875.13	ENST00000438237.6	2216	10	42	13202	0	-1606	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCCACCCTCCCATTAG	NA	NA	NA	NA	NA	NA	NA	NA	114807636	115045880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114808033_114890900_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616
ENSMUSG00000040875.13_114807785_115046099_1	chr9	+	1502	7	NNC	ENSMUSG00000040875.13	novel	2216	10	NA	NA	148	-1387	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	980	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACTTAGTGAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	114807784	115046099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_114808033_114890900_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036582_115036732_115045616
ENSMUSG00000040875.13_114807882_115052707_1	chr9	+	1451	8	ISM	ENSMUSG00000040875.13	ENST00000438237.6	2216	10	287	6375	245	5221	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	880	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGCCTACGCCCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	114807881	115052707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114808033_114890900_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660
ENSMUSG00000040875.13_114807943_115052747_1	chr9	+	1430	8	ISM	ENSMUSG00000040875.13	ENST00000438237.6	2216	10	348	6335	306	5261	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCTTGGAGGGAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	114807942	115052747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114808033_114890900_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660
ENSMUSG00000040875.13_114807996_115052796_1	chr9	+	1426	8	ISM	ENSMUSG00000040875.13	ENST00000438237.6	2216	10	401	6286	359	5310	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACCGTGACGTTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	114807995	115052796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114808033_114890900_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660
ENSMUSG00000040875.13_114890924_115055780_1	chr9	+	1449	8	ISM	ENSMUSG00000040875.13	ENST00000438237.6	2216	10	83329	3302	-5423	-3302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCATCGTCTGTAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	114890923	115055780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748
ENSMUSG00000040875.13_114890980_115055825_1	chr9	+	1438	8	ISM	ENSMUSG00000040875.13	ENST00000438237.6	2216	10	83385	3257	-5367	-3257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCACCTACAGCAACGGG	NA	NA	NA	NA	NA	NA	NA	NA	114890979	115055825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748
ENSMUSG00000040875.13_114891026_115055880_1	chr9	+	1447	8	ISM	ENSMUSG00000040875.13	ENST00000438237.6	2216	10	83431	3202	-5321	-3202	internal_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCCTAAGAAGCTTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	114891025	115055880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748
ENSMUSG00000040875.13_114896347_115058974_1	chr9	+	1461	8	ISM	ENSMUSG00000040875.13	ENST00000438237.6	2216	10	88752	108	0	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGCAGCCACAGAGCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	114896346	115058974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927
ENSMUSG00000040875.13_114996148_115059081_1	chr9	+	1523	7	ISM	ENSMUSG00000040875.13	ENSMUST00000046627.6	1872	10	99801	2210	78239	-1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCCTGGCCTGCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	114996147	115059081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927
ENSMUSG00000040877.17_108860243_108864651_1	chr12	+	1022	2	NNC	ENSMUSG00000040877.17	novel	4356	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGACAAGGGAAAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	108860242	108864651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_108860448_108863834
ENSMUSG00000040877.17_108860243_108864651_2	chr12	+	1029	2	FSM	ENSMUSG00000040877.17	ENST00000554175.5	936	2	-93	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGACAAGGGAAAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	108860242	108864651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_108860455_108863834
ENSMUSG00000040888.11_24912164_24915130_1	chr17	-	1775	3	NNC	ENSMUSG00000040888.11	novel	1776	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCTGGTTTCTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	24915130	24912163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_24913412_24914223_24914425_24914804
ENSMUSG00000040888.11_24913325_24915064_1	chr17	-	551	3	FSM	ENSMUSG00000040888.11	ENST00000248114.7	605	3	-18	72	0	-72	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGATTTTGACTGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	24915064	24913324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24913412_24914220_24914425_24914804
ENSMUSG00000040918.13_164076822_164089642_1	chr1	+	1060	4	ISM	ENSMUSG00000040918.13	ENSMUST00000044021.12	3571	6	207	3312	0	-1445	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAAGCTATCTTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	164076821	164089642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_164077026_164084315_164084919_164088360_164088587_164089615
ENSMUSG00000040918.13_164076822_164089696_1	chr1	+	1114	4	ISM	ENSMUSG00000040918.13	ENSMUST00000044021.12	3571	6	207	3258	0	-1391	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGATTGCTGCTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	164076821	164089696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_164077026_164084315_164084919_164088360_164088587_164089615
ENSMUSG00000040918.13_164076941_164089740_1	chr1	+	1039	4	ISM	ENSMUSG00000040918.13	ENSMUST00000044021.12	3571	6	326	3214	119	-1347	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGTGTGCTATGCATC	NA	NA	NA	NA	NA	NA	NA	NA	164076940	164089740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_164077026_164084315_164084919_164088360_164088587_164089615
ENSMUSG00000040918.13_164084384_164090280_1	chr1	+	1046	4	ISM	ENSMUSG00000040918.13	ENSMUST00000044021.12	3571	6	7769	2674	7562	-807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATTGTCGTGGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	164084383	164090280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_164084919_164088360_164088587_164089615_164089809_164090188
ENSMUSG00000040918.13_164084608_164091125_1	chr1	+	1039	5	ISM	ENSMUSG00000040918.13	ENSMUST00000044021.12	3571	6	7993	1829	7786	38	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACCGCAGCTGCTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	164084607	164091125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ENSMUSG00000040918.13_164084700_164091206_1	chr1	+	1028	5	ISM	ENSMUSG00000040918.13	ENSMUST00000044021.12	3571	6	8085	1748	7878	119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTACTCAACTAACACCT	NA	NA	NA	NA	NA	NA	NA	NA	164084699	164091206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ENSMUSG00000040918.13_164084751_164091275_1	chr1	+	1046	5	ISM	ENSMUSG00000040918.13	ENSMUST00000044021.12	3571	6	8136	1679	7929	188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGGATTGCTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	164084750	164091275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ENSMUSG00000040918.13_164088388_164091452_1	chr1	+	1028	4	ISM	ENSMUSG00000040918.13	ENSMUST00000169394.2	894	5	11566	-365	11566	365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACAGGATGGTACAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	164088387	164091452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_164088587_164089615_164089809_164090188_164090331_164090958
ENSMUSG00000040918.13_164088441_164091521_1	chr1	+	1044	4	ISM	ENSMUSG00000040918.13	ENSMUST00000169394.2	894	5	11619	-434	11619	434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTACTTGTGCGCAT	NA	NA	NA	NA	NA	NA	NA	NA	164088440	164091521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_164088587_164089615_164089809_164090188_164090331_164090958
ENSMUSG00000040918.13_164088488_164091578_1	chr1	+	1054	4	ISM	ENSMUSG00000040918.13	ENSMUST00000169394.2	894	5	11666	-491	11666	491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTATCTGCTCGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	164088487	164091578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_164088587_164089615_164089809_164090188_164090331_164090958
ENSMUSG00000040918.13_164089696_164091788_1	chr1	+	1085	3	ISM	ENSMUSG00000040918.13	ENSMUST00000169394.2	894	5	12874	-701	12874	701	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTGAGGAGGGCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	164089695	164091788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_164089809_164090188_164090331_164090958
ENSMUSG00000040918.13_164090233_164091915_1	chr1	+	1055	2	ISM	ENSMUSG00000040918.13	ENSMUST00000169394.2	894	5	13411	-828	13411	828	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTTTATTTCCAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	164090232	164091915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_164090331_164090958
ENSMUSG00000040918.13_164090282_164091969_1	chr1	+	1060	2	ISM	ENSMUSG00000040918.13	ENSMUST00000169394.2	894	5	13460	-882	13460	882	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATACCTCTCATTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	164090281	164091969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_164090331_164090958
ENSMUSG00000040938.17_70104505_70107243_1	chr11	+	1910	6	ISM	ENSMUSG00000040938.17	ENSMUST00000126388.8	1938	7	927	-4	-231	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGAGTTCCATTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	70104504	70107243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70104704_70104919_70105091_70105191_70105539_70105780_70105925_70106109_70106878_70106962
ENSMUSG00000040938.17_70104556_70107243_1	chr11	+	1854	6	NNC	ENSMUSG00000040938.17	novel	1938	7	NA	NA	-180	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	839	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGAGTTCCATTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	70104555	70107243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_70104704_70104919_70105086_70105191_70105539_70105780_70105925_70106109_70106878_70106962
ENSMUSG00000040938.17_70104614_70107243_1	chr11	+	1801	6	ISM	ENSMUSG00000040938.17	ENSMUST00000126388.8	1938	7	1036	-4	-122	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGAGTTCCATTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	70104613	70107243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70104704_70104919_70105091_70105191_70105539_70105780_70105925_70106109_70106878_70106962
ENSMUSG00000040938.17_70104736_70106877_1	chr11	+	1478	4	ISM	ENSMUSG00000040938.17	ENSMUST00000171032.8	1754	5	0	361	0	-361	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGCTGAGCTCGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	70104735	70106877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70105091_70105327_70105539_70105780_70105925_70106109
ENSMUSG00000040938.17_70104906_70107083_1	chr11	+	1429	5	FSM	ENSMUSG00000040938.17	ENSMUST00000171032.8	1754	5	170	155	-35	-155	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCTCCAGCAACCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	70104905	70107083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70105091_70105327_70105539_70105780_70105925_70106109_70106878_70106962
ENSMUSG00000040945.14_140428784_140443246_1	chr4	+	1111	8	ISM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	0	7285	0	-7285	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGGCCATCTTCATCG	NA	NA	NA	NA	NA	NA	NA	NA	140428783	140443246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176
ENSMUSG00000040945.14_140428784_140448781_1	chr4	+	2017	13	FSM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	0	1750	0	-1750	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTTGTATTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	140428783	140448781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ENSMUSG00000040945.14_140429609_140449032_1	chr4	+	1939	12	ISM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	825	1499	825	-1499	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCTCCCCTCATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	140429608	140449032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ENSMUSG00000040945.14_140444354_140449144_1	chr4	+	1149	5	ISM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	15570	1387	9092	-1387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTAGCCATTTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	140444353	140449144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ENSMUSG00000040945.14_140444354_140449978_1	chr4	+	1983	5	ISM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	15570	553	9092	-553	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCACCCCAGACACCGCC	NA	NA	NA	NA	NA	NA	NA	NA	140444353	140449978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ENSMUSG00000040945.14_140444959_140450113_1	chr4	+	1937	4	ISM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	16175	418	9697	-418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGGTCACCAAGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	140444958	140450113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_140445042_140445650_140445724_140447855_140447934_140448410
ENSMUSG00000040950.14_70021236_70027348_1	chr11	+	698	8	ISM	ENSMUSG00000040950.14	ENSMUST00000041550.12	1586	10	81	1028	-14	-1026	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGAAGCTGACAAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	70021235	70027348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70021269_70024944_70025090_70025877_70025989_70026416_70026513_70026595_70026668_70026746_70026819_70027076_70027164_70027266
ENSMUSG00000040950.14_70025878_70027776_1	chr11	+	727	8	ISM	ENSMUSG00000040950.14	ENSMUST00000041550.12	1586	10	4723	600	4628	-598	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGACATATGCTAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	70025877	70027776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70025989_70026416_70026513_70026595_70026668_70026746_70026819_70027076_70027164_70027266_70027419_70027495_70027603_70027746
ENSMUSG00000040950.14_70026429_70027927_1	chr11	+	755	7	ISM	ENSMUSG00000040950.14	ENSMUST00000041550.12	1586	10	5274	449	5179	-447	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTCCATAAGCCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	70026428	70027927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70026513_70026595_70026668_70026746_70026819_70027076_70027164_70027266_70027419_70027495_70027603_70027746
ENSMUSG00000040950.14_70026763_70028121_1	chr11	+	777	5	ISM	ENSMUSG00000040950.14	ENSMUST00000041550.12	1586	10	5608	255	5513	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAAAAAGAAAGAAATATA	NA	NA	NA	NA	NA	NA	NA	NA	70026762	70028121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70026819_70027076_70027164_70027266_70027419_70027495_70027603_70027746
ENSMUSG00000040950.14_70027271_70028228_1	chr11	+	737	3	ISM	ENSMUSG00000040950.14	ENSMUST00000041550.12	1586	10	6116	148	6021	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGAACCTGCCACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	70027270	70028228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70027419_70027495_70027603_70027746
ENSMUSG00000040950.14_70027396_70028374_1	chr11	+	758	3	ISM	ENSMUSG00000040950.14	ENSMUST00000041550.12	1586	10	6241	2	6146	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTTAGCTCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	70027395	70028374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70027419_70027495_70027603_70027746
ENSMUSG00000040952.17_24583796_24584633_1	chr7	+	370	2	ISM	ENSMUSG00000040952.17	ENSMUST00000108430.10	774	6	0	4598	0	-4594	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTGTTGGAACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	24583795	24584633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24584093_24584560
ENSMUSG00000040952.17_24583929_24584977_1	chr7	+	336	3	ISM	ENSMUSG00000040952.17	ENSMUST00000108428.8	1284	5	-132	4250	-132	-4250	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAACTGAGGCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	24583928	24584977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24584093_24584560_24584632_24584876
ENSMUSG00000040952.17_24584061_24587778_1	chr7	+	276	4	ISM	ENSMUSG00000040952.17	ENSMUST00000108428.8	1284	5	0	1449	0	-1449	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGAGAAACGGTGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	24584060	24587778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706
ENSMUSG00000040952.17_24584061_24587890_1	chr7	+	388	4	ISM	ENSMUSG00000040952.17	ENSMUST00000108428.8	1284	5	0	1337	0	-1337	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCAGGGTTGTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	24584060	24587890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706
ENSMUSG00000040952.17_24584560_24587890_1	chr7	+	357	3	ISM	ENSMUSG00000040952.17	ENSMUST00000108429.8	633	6	421	1341	421	-1337	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCAGGGTTGTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	24584559	24587890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24584632_24584876_24584978_24587706
ENSMUSG00000040952.17_24584877_24589231_1	chr7	+	406	4	ISM	ENSMUSG00000040952.17	ENSMUST00000108429.8	633	6	738	0	738	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	24584876	24589231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24584978_24587706_24587891_24588331_24588387_24589165
ENSMUSG00000040978.5_9004209_9019356_1	chr11	+	1608	5	ISM	ENSMUSG00000040978.5	ENSMUST00000043285.5	2400	7	5615	0	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1051	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGCTGCCTCTCTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	9004208	9019356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_9004319_9006421_9006579_9009910_9010009_9011165_9011387_9018334
ENSMUSG00000040978.5_9004209_9019356_2	chr11	+	1602	5	NNC	ENSMUSG00000040978.5	novel	2400	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1051	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGCTGCCTCTCTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	9004208	9019356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_9004319_9006421_9006579_9009910_9010009_9011165_9011387_9018340
ENSMUSG00000040985.14_8966054_8979490_1	chr11	-	925	6	ISM	ENSMUSG00000040985.14	ENST00000395572.6	1124	9	8826	-6	8826	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTCTTTGGTAGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	8979490	8966053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_8966357_8968146_8968240_8971751_8971920_8973293_8973410_8978032_8978118_8979330
ENSMUSG00000040985.14_8966187_8981455_1	chr11	-	854	8	ISM	ENSMUSG00000040985.14	ENST00000395572.6	1124	9	6861	127	6861	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTATTTCCTTACGTCA	NA	NA	NA	NA	NA	NA	NA	NA	8981455	8966186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_8966357_8968146_8968240_8971751_8971920_8973293_8973410_8978032_8978118_8979330_8979491_8980234_8980276_8981434
ENSMUSG00000040985.14_8966275_8981511_1	chr11	-	817	8	NNC	ENSMUSG00000040985.14	novel	1124	9	NA	NA	6805	-215	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAGAGTCCACGGCATC	NA	NA	NA	NA	NA	NA	NA	NA	8981511	8966274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_8966357_8968146_8968240_8971751_8971920_8973293_8973410_8978032_8978118_8979330_8979486_8980234_8980276_8981434
ENSMUSG00000040985.14_8966334_8988284_1	chr11	-	818	9	FSM	ENSMUSG00000040985.14	ENST00000395572.6	1124	9	32	274	32	-274	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGTAAAACTTCAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	8988284	8966333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_8966357_8968146_8968240_8971751_8971920_8973293_8973410_8978032_8978118_8979330_8979491_8980234_8980276_8981434_8981539_8988256
ENSMUSG00000040990.18_158410268_158749388_1	chrX	+	2218	16	ISM	ENSMUSG00000040990.18	ENSMUST00000112456.9	7317	18	0	11677	0	-6777	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGAGCAGCCAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	158410267	158749388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158410688_158466539_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209
ENSMUSG00000040990.18_158410426_158749441_1	chrX	+	2113	16	ISM	ENSMUSG00000040990.18	ENSMUST00000112456.9	7317	18	158	11624	-111	-6724	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGACCATCATTGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	158410425	158749441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158410688_158466539_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209
ENSMUSG00000040990.18_158466539_158756315_1	chrX	+	2148	17	ISM	ENSMUSG00000040990.18	ENSMUST00000112456.9	7317	18	56271	4750	-25058	150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCCATCCAAGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	158466538	158756315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_158547037_158756468_1	chrX	+	2113	16	ISM	ENSMUSG00000040990.18	ENSMUST00000080394.13	2980	17	55440	695	55440	303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATATTTTCCATTAACA	NA	NA	NA	NA	NA	NA	NA	NA	158547036	158756468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_158611411_158756861_1	chrX	+	2136	13	ISM	ENSMUSG00000040990.18	ENSMUST00000080394.13	2980	17	119814	302	-12053	-302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAGTAAAAATCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	158611410	158756861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_158611471_158756890_1	chrX	+	2105	13	ISM	ENSMUSG00000040990.18	ENSMUST00000080394.13	2980	17	119874	273	-11993	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACTAGAGGTCGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	158611470	158756890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_158611531_158756950_1	chrX	+	2105	13	ISM	ENSMUSG00000040990.18	ENSMUST00000080394.13	2980	17	119934	213	-11933	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCGCTGTGAAGTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	158611530	158756950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_158623477_158756955_1	chrX	+	2196	13	FSM	ENSMUSG00000040990.18	ENSMUST00000112451.8	3914	13	13	1705	0	-208	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGAAGTCTGGCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	158623476	158756955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_158623608_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_158623477_158757011_1	chrX	+	2252	13	FSM	ENSMUSG00000040990.18	ENSMUST00000112451.8	3914	13	13	1649	0	-152	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGGTTGTTCACGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	158623476	158757011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_158623608_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_158623577_158757163_1	chrX	+	2304	13	FSM	ENSMUSG00000040990.18	ENSMUST00000112451.8	3914	13	113	1497	100	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGGGGGGGAATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	158623576	158757163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_158623608_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_158684670_158757354_1	chrX	+	2295	10	ISM	ENSMUSG00000040990.18	ENSMUST00000112453.9	2515	14	61193	-191	61193	191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGATCTTTCCTGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	158684669	158757354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_158702855_158757538_1	chrX	+	2135	7	ISM	ENSMUSG00000040990.18	ENSMUST00000112453.9	2515	14	79378	-375	79378	375	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGAGTGGTCCCTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	158702854	158757538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_158726191_158757662_1	chrX	+	2202	6	ISM	ENSMUSG00000040990.18	ENSMUST00000112453.9	2515	14	102714	-499	102714	499	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAGAATTAATGACACT	NA	NA	NA	NA	NA	NA	NA	NA	158726190	158757662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_158741237_158757769_1	chrX	+	2193	5	ISM	ENSMUSG00000040990.18	ENSMUST00000112453.9	2515	14	117760	-606	117760	606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTTGTTCTAACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	158741236	158757769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_158741288_158757821_1	chrX	+	2194	5	ISM	ENSMUSG00000040990.18	ENSMUST00000112453.9	2515	14	117811	-658	117811	658	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTAAGGATTTACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	158741287	158757821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_158749243_158758002_1	chrX	+	2182	3	ISM	ENSMUSG00000040990.18	ENSMUST00000112451.8	3914	13	125779	658	125766	-658	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTGTTTCCCTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	158749242	158758002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_158749288_158758064_1	chrX	+	2199	3	ISM	ENSMUSG00000040990.18	ENSMUST00000112451.8	3914	13	125824	596	125811	-596	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTACCACTTATTACAAC	NA	NA	NA	NA	NA	NA	NA	NA	158749287	158758064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_158749360_158758107_1	chrX	+	2170	3	ISM	ENSMUSG00000040990.18	ENSMUST00000112451.8	3914	13	125896	553	125883	-553	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATTTCTCATTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	158749359	158758107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_158754860_158758247_1	chrX	+	2189	2	ISM	ENSMUSG00000040990.18	ENSMUST00000112451.8	3914	13	131396	413	131383	-413	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCTAAGAGAGGCATTAG	NA	NA	NA	NA	NA	NA	NA	NA	158754859	158758247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158754922_158756120
ENSMUSG00000040997.15_54496689_54505311_1	chr14	+	1091	7	FSM	ENSMUSG00000040997.15	ENSMUST00000041197.13	2401	7	0	1310	0	-224	multi-exon	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATGCCCTGAGAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	54496688	54505311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ENSMUSG00000040997.15_54500104_54505535_1	chr14	+	1142	5	ISM	ENSMUSG00000040997.15	ENSMUST00000041197.13	2401	7	3415	1086	3415	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATAAAGGGCTGCCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	54500103	54505535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ENSMUSG00000040997.15_54500433_54505757_1	chr14	+	1035	5	ISM	ENSMUSG00000040997.15	ENSMUST00000041197.13	2401	7	3744	864	3744	222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGCCCACCAGAAGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	54500432	54505757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ENSMUSG00000040997.15_54504548_54505860_1	chr14	+	727	2	ISM	ENSMUSG00000040997.15	ENSMUST00000041197.13	2401	7	7859	761	7859	325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATAGCACATGATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	54504547	54505860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_54504639_54505224
ENSMUSG00000040998.19_132589136_132612535_1	chr3	-	2181	7	ISM	ENSMUSG00000040998.19	ENSMUST00000117456.8	3383	12	43040	676	43040	-676	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGGCTAGGAAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	132612535	132589135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455
ENSMUSG00000040998.19_132589404_132615730_1	chr3	-	2162	9	ISM	ENSMUSG00000040998.19	ENSMUST00000117456.8	3383	12	39845	944	39845	489	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTCATGATGGCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	132615730	132589403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656
ENSMUSG00000040998.19_132589745_132655810_1	chr3	-	2189	13	FSM	ENSMUSG00000040998.19	ENSMUST00000042729.16	3601	13	111	1301	-5	148	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTCACTTCAGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	132655810	132589744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132623221_132623315_132637342_132637394_132653807_132653909_132655733
ENSMUSG00000041014.18_38091686_38093260_1	chr14	-	1339	2	ISM	ENSMUSG00000041014.18	ENST00000372142.6	2578	8	296989	569	296989	-569	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGCTTACTCACATAAG	NA	NA	NA	NA	NA	NA	NA	NA	38093260	38091685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_38092998_38093233
ENSMUSG00000041014.18_38091748_38093303_1	chr14	-	1320	2	ISM	ENSMUSG00000041014.18	ENST00000372142.6	2578	8	296946	631	296946	-631	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	38093303	38091747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_38092998_38093233
ENSMUSG00000041014.18_38091889_38098416_1	chr14	-	1307	3	ISM	ENSMUSG00000041014.18	ENST00000372142.6	2578	8	291833	772	291833	545	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGCACAGAACCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	38098416	38091888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_38092998_38093233_38093306_38098290
ENSMUSG00000041014.18_38092068_38098464_1	chr14	-	1104	2	ISM	ENSMUSG00000041014.18	ENST00000556918.5	1133	7	291785	-422	291785	366	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCCCTAAATTTCTATTC	NA	NA	NA	NA	NA	NA	NA	NA	38098464	38092067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_38092998_38098290
ENSMUSG00000041014.18_38092154_38119264_1	chr14	-	1293	5	ISM	ENSMUSG00000041014.18	ENST00000372142.6	2578	8	270985	1037	270985	280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTAGCTTCAAAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	38119264	38092153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_38092998_38093233_38093306_38098290_38098462_38103580_38103709_38119186
ENSMUSG00000041014.18_38092298_38129112_1	chr14	-	1165	5	ISM	ENSMUSG00000041014.18	ENSMUST00000168810.9	2175	9	1065670	-136	261137	136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTACTACTAAAGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	38129112	38092297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_38092998_38098290_38098465_38103580_38103709_38119186_38119308_38129070
ENSMUSG00000041014.18_38092298_38129182_1	chr14	-	1304	6	ISM	ENSMUSG00000041014.18	ENST00000372142.6	2578	8	261067	1181	261067	136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTACTACTAAAGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	38129182	38092297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_38092998_38093233_38093306_38098290_38098462_38103580_38103709_38119186_38119308_38129070
ENSMUSG00000041014.18_38092298_38231313_1	chr14	-	1322	7	ISM	ENSMUSG00000041014.18	ENST00000372142.6	2578	8	158936	1181	158936	136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTACTACTAAAGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	38231313	38092297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_38092998_38093233_38093306_38098290_38098462_38103580_38103709_38119186_38119308_38129070_38129174_38231286
ENSMUSG00000041014.18_38092434_38390217_1	chr14	-	1229	8	FSM	ENSMUSG00000041014.18	ENST00000372142.6	2578	8	32	1317	32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATACAAATTATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	38390217	38092433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_38092998_38093233_38093306_38098290_38098462_38103580_38103709_38119186_38119308_38129070_38129174_38231286_38231314_38390174
ENSMUSG00000041014.18_38092450_38129182_1	chr14	-	1083	5	ISM	ENSMUSG00000041014.18	ENSMUST00000168810.9	2175	9	1065600	16	261067	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGAAGGAGAGGAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	38129182	38092449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_38092998_38098290_38098465_38103580_38103709_38119186_38119308_38129070
ENSMUSG00000041014.18_38092450_38390204_1	chr14	-	1131	7	ISM	ENSMUSG00000041014.18	ENSMUST00000168810.9	2175	9	804578	16	45	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGAAGGAGAGGAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	38390204	38092449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_38092998_38098290_38098465_38103580_38103709_38119186_38119308_38129070_38129174_38231286_38231314_38390174
ENSMUSG00000041014.18_38092450_38390248_1	chr14	-	1175	7	ISM	ENSMUSG00000041014.18	ENSMUST00000168810.9	2175	9	804534	16	1	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGAAGGAGAGGAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	38390248	38092449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_38092998_38098290_38098465_38103580_38103709_38119186_38119308_38129070_38129174_38231286_38231314_38390174
ENSMUSG00000041028.17_36843414_36849563_1	chr14	-	1151	4	ISM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	7533	633	7533	-633	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGAGGCAAGCAGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	36849563	36843413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543
ENSMUSG00000041028.17_36843828_36855209_1	chr14	-	1162	7	ISM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	1887	1047	1887	-1047	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATTGTTTTATGTATT	NA	NA	NA	NA	NA	NA	NA	NA	36855209	36843827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127
ENSMUSG00000041028.17_36843997_36855760_1	chr14	-	1182	8	ISM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	1336	1216	1336	-1216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCTGTCACCATGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	36855760	36843996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589
ENSMUSG00000041028.17_36844122_36857096_1	chr14	-	1232	9	FSM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	0	1341	0	-1341	multi-exon	FALSE	canonical	NA	NA	NA	NA	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGGAAGCAACAGAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	36857096	36844121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36856921
ENSMUSG00000041028.17_36844151_36848001_1	chr14	-	348	3	ISM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	9095	1370	9095	-1370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGCGAGTTGCAACTA	NA	NA	NA	NA	NA	NA	NA	NA	36848001	36844150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36844184_36847116_36847289_36847858
ENSMUSG00000041028.17_36847210_36849618_1	chr14	-	343	3	ISM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	7478	4429	7478	-4429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATGTTCCTTCTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	36849618	36847209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36847289_36847858_36848048_36849543
ENSMUSG00000041028.17_36848008_36853555_1	chr14	-	352	4	ISM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	3541	5227	3541	-5227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCTCTTCTCCTGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	36853555	36848007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36848048_36849543_36849653_36852592_36852735_36853494
ENSMUSG00000041028.17_36852617_36855609_1	chr14	-	350	4	ISM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	1487	9836	1487	-9836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGATGACAGGCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	36855609	36852616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36852735_36853494_36853607_36855127_36855228_36855589
ENSMUSG00000041028.17_36852684_36855653_1	chr14	-	327	4	ISM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	1443	9903	1443	-9903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGAAGTATTGGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	36855653	36852683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36852735_36853494_36853607_36855127_36855228_36855589
ENSMUSG00000041028.17_36855128_36857211_1	chr14	-	331	3	ISM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-2	13079	-2	-12347	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTGGAAGTTAAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	36857211	36855127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36855228_36855589_36855761_36857151
ENSMUSG00000041035.10_45549074_45565950_1	chr19	+	557	6	FSM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	20	776	20	-776	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAAGGAGTTAAAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	45549073	45565950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_45549147_45553349_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
ENSMUSG00000041035.10_45565450_45566365_1	chr19	+	541	2	ISM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	16396	361	16396	-361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTGCCTTATACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	45565449	45566365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_45565535_45565909
ENSMUSG00000041057.11_71923327_71940640_1	chr17	+	694	6	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	117	25386	117	-25386	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGAGTGCAGTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	71923326	71940640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618
ENSMUSG00000041057.11_71923380_71940690_1	chr17	+	691	6	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	170	25336	170	-25336	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTGACTTTGTCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	71923379	71940690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618
ENSMUSG00000041057.11_71932374_71945318_1	chr17	+	675	7	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	9164	20708	9164	-20708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGACTTCAAATTGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	71932373	71945318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303
ENSMUSG00000041057.11_71932421_71945372_1	chr17	+	682	7	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	9211	20654	9211	-20654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACCAAAACCCATCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	71932420	71945372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303
ENSMUSG00000041057.11_71932462_71945441_1	chr17	+	710	7	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	9252	20585	9252	-20585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAATTGGTTTCAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	71932461	71945441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303
ENSMUSG00000041057.11_71937218_71948342_1	chr17	+	684	7	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	14008	17684	14008	-17684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGCCAATCAAGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	71937217	71948342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281
ENSMUSG00000041057.11_71939080_71949757_1	chr17	+	674	7	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	15870	16269	15870	-16269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCAGACAAACAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	71939079	71949757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699
ENSMUSG00000041057.11_71945395_71959889_1	chr17	+	722	8	NNC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	22185	-6137	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCAAATCAGATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	71945394	71959889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955771_71955855_71957011_71957044_71957562_71957627_71959775
ENSMUSG00000041057.11_71947241_71960471_1	chr17	+	653	8	NNC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	24031	-5555	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACCTCTCCCGGACA	NA	NA	NA	NA	NA	NA	NA	NA	71947240	71960471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_71947316_71948281_71948414_71949699_71949829_71955771_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447
ENSMUSG00000041057.11_71948342_71964535_1	chr17	+	679	9	NNC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	25132	-1491	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAAGATGAGGACATGG	NA	NA	NA	NA	NA	NA	NA	NA	71948341	71964535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_71948414_71949699_71949829_71955771_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ENSMUSG00000041057.11_71948389_71964615_1	chr17	+	712	9	NNC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	25179	-1411	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCGGATTTAGATCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	71948388	71964615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_71948414_71949699_71949829_71955771_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ENSMUSG00000041057.11_71959775_71964973_1	chr17	+	738	4	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	36565	1053	36565	-1053	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGATTTAGGTGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	71959774	71964973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71959890_71960447_71960518_71964335_71964386_71964470
ENSMUSG00000041057.11_71964341_71965101_1	chr17	+	676	2	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	41131	925	41131	-925	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCCGGCACGTCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	71964340	71965101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71964386_71964470
ENSMUSG00000041079.13_87230295_87233657_1	chr16	-	1417	2	ISM	ENSMUSG00000041079.13	ENSMUST00000039101.12	2009	5	3804	0	3804	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTTGTTATCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	87233657	87230294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87231515_87233460
ENSMUSG00000041079.13_87230295_87233734_1	chr16	-	1494	2	ISM	ENSMUSG00000041079.13	ENSMUST00000039101.12	2009	5	3727	0	3727	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTTGTTATCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	87233734	87230294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87231515_87233460
ENSMUSG00000041079.13_87230422_87233812_1	chr16	-	1445	2	ISM	ENSMUSG00000041079.13	ENSMUST00000039101.12	2009	5	3649	127	3649	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATGGCAAGAGAAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	87233812	87230421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87231515_87233460
ENSMUSG00000041079.13_87230725_87234374_1	chr16	-	1414	4	ISM	ENSMUSG00000041079.13	ENSMUST00000039101.12	2009	5	3087	430	3087	-430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGCACATGCTTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	87234374	87230724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_87231515_87233460_87233824_87233951_87234020_87234181
ENSMUSG00000041079.13_87230834_87237449_1	chr16	-	1458	5	FSM	ENSMUSG00000041079.13	ENSMUST00000039101.12	2009	5	12	539	12	-539	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGGTGCTGGGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	87237449	87230833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_87231515_87233460_87233824_87233951_87234020_87234181_87234403_87237324
ENSMUSG00000041115.17_150927264_150987126_1	chrX	+	1373	3	ISM	ENSMUSG00000041115.17	ENST00000675719.1	6022	14	30	21107	0	9527	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAACCCTGCATACTTC	NA	NA	NA	NA	NA	NA	NA	NA	150927263	150987126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150928176_150985903_150986166_150986927
ENSMUSG00000041115.17_150927264_150987212_1	chrX	+	1459	3	ISM	ENSMUSG00000041115.17	ENST00000675719.1	6022	14	30	21021	0	9613	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCCCTTATGGAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	150927263	150987212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150928176_150985903_150986166_150986927
ENSMUSG00000041115.17_150927407_150987268_1	chrX	+	1372	3	ISM	ENSMUSG00000041115.17	ENST00000675719.1	6022	14	173	20965	139	9669	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACATCTGGAGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	150927406	150987268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150928176_150985903_150986166_150986927
ENSMUSG00000041115.17_150927847_150992125_1	chrX	+	1353	4	ISM	ENSMUSG00000041115.17	ENST00000675719.1	6022	14	613	16108	579	14526	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCACACCTCCCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	150927846	150992125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150928176_150985903_150986166_150986927_150987330_150991765
ENSMUSG00000041115.17_150927928_150992200_1	chrX	+	1347	4	ISM	ENSMUSG00000041115.17	ENST00000675719.1	6022	14	694	16033	660	14601	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGTCCACCGCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	150927927	150992200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150928176_150985903_150986166_150986927_150987330_150991765
ENSMUSG00000041115.17_150927982_150992256_1	chrX	+	1349	4	ISM	ENSMUSG00000041115.17	ENST00000675719.1	6022	14	748	15977	714	14657	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAAGCACAAGGGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	150927981	150992256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150928176_150985903_150986166_150986927_150987330_150991765
ENSMUSG00000041115.17_150963990_150977599_1	chrX	+	837	2	FSM	ENSMUSG00000041115.17	ENST00000639161.2	837	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTCTGATGTATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	150963989	150977599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_150964089_150976861
ENSMUSG00000041115.17_150985956_150992503_1	chrX	+	1350	3	ISM	ENSMUSG00000041115.17	ENSMUST00000096275.5	5252	14	23996	15729	21966	14904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCTCCTCTCGGGATAG	NA	NA	NA	NA	NA	NA	NA	NA	150985955	150992503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150986166_150986927_150987330_150991765
ENSMUSG00000041115.17_150986926_150994367_1	chrX	+	1462	3	ISM	ENSMUSG00000041115.17	ENSMUST00000096275.5	5252	14	24966	13865	22936	-13864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGACCCCAGCATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	150986925	150994367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150987330_150991765_150992662_150994205
ENSMUSG00000041115.17_150987212_150996329_1	chrX	+	1346	5	ISM	ENSMUSG00000041115.17	ENSMUST00000096275.5	5252	14	25252	11903	23222	-11902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGACACCATCTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	150987211	150996329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150987330_150991765_150992662_150994205_150994368_150995017_150995141_150996282
ENSMUSG00000041115.17_150987256_150996391_1	chrX	+	1364	5	ISM	ENSMUSG00000041115.17	ENSMUST00000096275.5	5252	14	25296	11841	23266	-11840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTGTCAAGGCTGAACG	NA	NA	NA	NA	NA	NA	NA	NA	150987255	150996391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150987330_150991765_150992662_150994205_150994368_150995017_150995141_150996282
ENSMUSG00000041115.17_150991816_150998550_1	chrX	+	1352	5	ISM	ENSMUSG00000041115.17	ENSMUST00000096275.5	5252	14	29856	9682	27826	-9681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCCAAGGTCGTGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	150991815	150998550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150992662_150994205_150994368_150995017_150995141_150996282_150996450_150998496
ENSMUSG00000041115.17_150992137_151002754_1	chrX	+	1370	8	ISM	ENSMUSG00000041115.17	ENSMUST00000096275.5	5252	14	30177	5478	28147	-5477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGTACCTGGAGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	150992136	151002754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150992662_150994205_150994368_150995017_150995141_150996282_150996450_150998496_150998637_150999336_150999463_151001872_151001973_151002727
ENSMUSG00000041115.17_150992196_151002802_1	chrX	+	1359	8	ISM	ENSMUSG00000041115.17	ENSMUST00000096275.5	5252	14	30236	5430	28206	-5429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCCTCCAAGACAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	150992195	151002802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150992662_150994205_150994368_150995017_150995141_150996282_150996450_150998496_150998637_150999336_150999463_151001872_151001973_151002727
ENSMUSG00000041115.17_150992300_151004679_1	chrX	+	1379	9	ISM	ENSMUSG00000041115.17	ENSMUST00000096275.5	5252	14	30340	3553	28310	-3552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCACAGCCTGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	150992299	151004679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150992662_150994205_150994368_150995017_150995141_150996282_150996450_150998496_150998637_150999336_150999463_151001872_151001973_151002727_151002890_151004642
ENSMUSG00000041115.17_150992363_151004726_1	chrX	+	1363	9	ISM	ENSMUSG00000041115.17	ENSMUST00000096275.5	5252	14	30403	3506	28373	-3505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGCAGTAGTCTGGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	150992362	151004726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150992662_150994205_150994368_150995017_150995141_150996282_150996450_150998496_150998637_150999336_150999463_151001872_151001973_151002727_151002890_151004642
ENSMUSG00000041115.17_150992577_151005974_1	chrX	+	1346	11	ISM	ENSMUSG00000041115.17	ENSMUST00000112605.8	6017	15	65309	2258	28587	-2257	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCCGCCAGAGGAGTACAA	NA	NA	NA	NA	NA	NA	NA	NA	150992576	151005974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150992662_150994205_150994368_150995017_150995141_150996282_150996450_150998496_150998637_150999336_150999463_151001872_151001973_151002727_151002890_151004642_151004817_151005278_151005329_151005917
ENSMUSG00000041115.17_150992621_151006032_1	chrX	+	1360	11	ISM	ENSMUSG00000041115.17	ENSMUST00000112605.8	6017	15	65353	2200	28631	-2199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCTATTTGGAAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	150992620	151006032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150992662_150994205_150994368_150995017_150995141_150996282_150996450_150998496_150998637_150999336_150999463_151001872_151001973_151002727_151002890_151004642_151004817_151005278_151005329_151005917
ENSMUSG00000041115.17_150994297_151006155_1	chrX	+	1351	10	ISM	ENSMUSG00000041115.17	ENSMUST00000112605.8	6017	15	67029	2077	30307	-2076	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTCACAGCCATGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	150994296	151006155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150994368_150995017_150995141_150996282_150996450_150998496_150998637_150999336_150999463_151001872_151001973_151002727_151002890_151004642_151004817_151005278_151005329_151005917
ENSMUSG00000041115.17_150995054_151006273_1	chrX	+	1362	9	ISM	ENSMUSG00000041115.17	ENSMUST00000112605.8	6017	15	67786	1959	31064	-1958	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACCCCCTCTGCCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	150995053	151006273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150995141_150996282_150996450_150998496_150998637_150999336_150999463_151001872_151001973_151002727_151002890_151004642_151004817_151005278_151005329_151005917
ENSMUSG00000041115.17_150995101_151006329_1	chrX	+	1371	9	ISM	ENSMUSG00000041115.17	ENSMUST00000112605.8	6017	15	67833	1903	31111	-1902	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCCACCACCACCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	150995100	151006329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150995141_150996282_150996450_150998496_150998637_150999336_150999463_151001872_151001973_151002727_151002890_151004642_151004817_151005278_151005329_151005917
ENSMUSG00000041115.17_150996354_151006430_1	chrX	+	1361	8	ISM	ENSMUSG00000041115.17	ENSMUST00000112605.8	6017	15	69086	1802	32364	-1801	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCAGAGCCCCAAGACG	NA	NA	NA	NA	NA	NA	NA	NA	150996353	151006430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150996450_150998496_150998637_150999336_150999463_151001872_151001973_151002727_151002890_151004642_151004817_151005278_151005329_151005917
ENSMUSG00000041115.17_150996416_151006482_1	chrX	+	1351	8	ISM	ENSMUSG00000041115.17	ENSMUST00000112605.8	6017	15	69148	1750	32426	-1749	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCGCCACCCCTTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	150996415	151006482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150996450_150998496_150998637_150999336_150999463_151001872_151001973_151002727_151002890_151004642_151004817_151005278_151005329_151005917
ENSMUSG00000041115.17_150998579_151006611_1	chrX	+	1364	7	ISM	ENSMUSG00000041115.17	ENSMUST00000112605.8	6017	15	71311	1621	34589	-1620	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGTGCAGCTGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	150998578	151006611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150998637_150999336_150999463_151001872_151001973_151002727_151002890_151004642_151004817_151005278_151005329_151005917
ENSMUSG00000041115.17_150999412_151006758_1	chrX	+	1378	6	ISM	ENSMUSG00000041115.17	ENSMUST00000112605.8	6017	15	72144	1474	35422	-1473	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTCACCCCTACCACCC	NA	NA	NA	NA	NA	NA	NA	NA	150999411	151006758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150999463_151001872_151001973_151002727_151002890_151004642_151004817_151005278_151005329_151005917
ENSMUSG00000041115.17_151001925_151006911_1	chrX	+	1428	5	ISM	ENSMUSG00000041115.17	ENSMUST00000112605.8	6017	15	74657	1321	37935	-1320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGTCTGGAGAAATCCAC	NA	NA	NA	NA	NA	NA	NA	NA	151001924	151006911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151001973_151002727_151002890_151004642_151004817_151005278_151005329_151005917
ENSMUSG00000041115.17_151004746_151007143_1	chrX	+	1347	3	ISM	ENSMUSG00000041115.17	ENSMUST00000112605.8	6017	15	77478	1089	40756	-1088	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTAGGCCTCGTCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	151004745	151007143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151004817_151005278_151005329_151005917
ENSMUSG00000041115.17_151004801_151007196_1	chrX	+	1345	3	ISM	ENSMUSG00000041115.17	ENSMUST00000112605.8	6017	15	77533	1036	40811	-1035	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTAGTTGGTGACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	151004800	151007196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_151004817_151005278_151005329_151005917
ENSMUSG00000041119.13_31605184_31695061_1	chr17	+	1963	20	FSM	ENSMUSG00000041119.13	ENST00000291539.11	2050	20	15	72	0	-69	multi-exon	FALSE	canonical	NA	NA	NA	NA	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAATTCACGATGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	31605183	31695061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31661899_31662037_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692214_31694898
ENSMUSG00000041119.13_31605184_31695061_2	chr17	+	1957	20	NNC	ENSMUSG00000041119.13	novel	2050	20	NA	NA	0	-69	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAATTCACGATGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	31605183	31695061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31661899_31662037_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692208_31694898
ENSMUSG00000041119.13_31605184_31695061_3	chr17	+	1957	20	NNC	ENSMUSG00000041119.13	novel	2050	20	NA	NA	0	-69	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAATTCACGATGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	31605183	31695061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31661905_31662037_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692214_31694898
ENSMUSG00000041119.13_31605184_31695061_4	chr17	+	1960	20	NNC	ENSMUSG00000041119.13	novel	2050	20	NA	NA	0	-69	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAATTCACGATGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	31605183	31695061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31661899_31662037_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679155_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692214_31694898
ENSMUSG00000041119.13_31605184_31695061_5	chr17	+	1962	20	NNC	ENSMUSG00000041119.13	novel	2050	20	NA	NA	0	-69	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAATTCACGATGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	31605183	31695061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31661899_31662037_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690733_31690829_31692131_31692214_31694898
ENSMUSG00000041119.13_31605184_31695061_6	chr17	+	1957	20	NNC	ENSMUSG00000041119.13	novel	2050	20	NA	NA	0	-69	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAATTCACGATGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	31605183	31695061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31661899_31662037_31662139_31662195_31662811_31662883_31667346_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692214_31694898
ENSMUSG00000041119.13_31605268_31680701_1	chr17	+	904	11	ISM	ENSMUSG00000041119.13	ENST00000398224.3	1672	17	7	14432	7	-14429	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGGGGCCAGAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	31605267	31680701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_31605331_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544
ENSMUSG00000041119.13_31605268_31695133_1	chr17	+	1945	20	NNC	ENSMUSG00000041119.13	novel	2050	20	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTATTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	31605267	31695133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31661899_31662037_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692208_31694898
ENSMUSG00000041119.13_31605268_31695133_2	chr17	+	1951	20	FSM	ENSMUSG00000041119.13	ENST00000291539.11	2050	20	99	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTATTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	31605267	31695133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31661899_31662037_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692214_31694898
ENSMUSG00000041119.13_31605268_31695133_3	chr17	+	1950	20	NNC	ENSMUSG00000041119.13	novel	2050	20	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTATTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	31605267	31695133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31661899_31662037_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674028_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692214_31694898
ENSMUSG00000041119.13_31633130_31695133_1	chr17	+	1831	19	NNC	ENSMUSG00000041119.13	novel	2050	20	NA	NA	-18915	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	891	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTATTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	31633129	31695133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_31633146_31634253_31634332_31639218_31639263_31661899_31662037_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685330_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692214_31694898
ENSMUSG00000041119.13_31633130_31695133_2	chr17	+	1826	19	NNC	ENSMUSG00000041119.13	novel	2050	20	NA	NA	-18915	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTATTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	31633129	31695133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_31633146_31634253_31634332_31639218_31639263_31661899_31662037_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680551_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692214_31694898
ENSMUSG00000041119.13_31633130_31695133_3	chr17	+	1835	19	NNC	ENSMUSG00000041119.13	novel	2050	20	NA	NA	-18915	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTATTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	31633129	31695133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_31633146_31634253_31634332_31639218_31639263_31661899_31662037_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692216_31694898
ENSMUSG00000041124.12_4383535_4386346_1	chr9	+	2216	2	FSM	ENSMUSG00000041124.12	ENSMUST00000047173.10	2731	2	0	515	0	-515	multi-exon	FALSE	canonical	NA	NA	NA	NA	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATAGTAGTAACTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	4383534	4386346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_4384143_4384738
ENSMUSG00000041124.12_4383757_4386572_1	chr9	+	2220	2	FSM	ENSMUSG00000041124.12	ENSMUST00000047173.10	2731	2	222	289	222	-289	multi-exon	FALSE	canonical	NA	NA	NA	NA	3013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTCCTGATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	4383756	4386572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_4384143_4384738
ENSMUSG00000041124.12_4383962_4386687_1	chr9	+	2130	2	FSM	ENSMUSG00000041124.12	ENSMUST00000047173.10	2731	2	427	174	427	-174	multi-exon	FALSE	canonical	NA	NA	NA	NA	2639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATACAACACTTCTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	4383961	4386687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_4384143_4384738
ENSMUSG00000041126.17_6377955_6379190_1	chr11	-	573	2	ISM	ENSMUSG00000041126.17	ENSMUST00000093346.6	519	4	15162	-183	15162	183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTTTTAAGATATTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	6379190	6377954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6378433_6379095
ENSMUSG00000041126.17_6378138_6394352_1	chr11	-	633	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	91	909	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTGTCTCAGTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	6394352	6378137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
ENSMUSG00000041133.12_150799424_150810766_1	chrX	+	1035	6	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	0	34924	0	-34924	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTCGAAGCAGCCAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	150799423	150810766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689
ENSMUSG00000041133.12_150799533_150810821_1	chrX	+	981	6	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	109	34869	109	-34869	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGTGACATGGATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	150799532	150810821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689
ENSMUSG00000041133.12_150799590_150810870_1	chrX	+	973	6	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	166	34820	166	-34820	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCGACAGGAGTTTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	150799589	150810870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689
ENSMUSG00000041133.12_150805845_150811106_1	chrX	+	971	6	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	6421	34584	6421	-34584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTCAATCGAGACCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	150805844	150811106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036
ENSMUSG00000041133.12_150805894_150811159_1	chrX	+	975	6	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	6470	34531	6470	-34531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGTAGAAACAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	150805893	150811159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036
ENSMUSG00000041133.12_150809230_150812230_1	chrX	+	974	6	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	9806	33460	9806	-33460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTAGAGATGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	150809229	150812230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186
ENSMUSG00000041133.12_150809292_150812284_1	chrX	+	966	6	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	9868	33406	9868	-33406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGATGGAGCAATTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	150809291	150812284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186
ENSMUSG00000041133.12_150809350_150812351_1	chrX	+	975	6	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	9926	33339	9926	-33339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATAATGGAAAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	150809349	150812351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186
ENSMUSG00000041133.12_150809526_150816732_1	chrX	+	970	6	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	10102	28958	10102	-28958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTATCAGATTGCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	150809525	150816732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694
ENSMUSG00000041133.12_150809586_150816774_1	chrX	+	952	6	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	10162	28916	10162	-28916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCTATTATTGTAGACT	NA	NA	NA	NA	NA	NA	NA	NA	150809585	150816774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694
ENSMUSG00000041133.12_150809730_150817030_1	chrX	+	969	7	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	10306	28660	10306	-28660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAATTCGTTATGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	150809729	150817030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975
ENSMUSG00000041133.12_150810690_150817155_1	chrX	+	1057	6	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	11266	28535	11266	-28535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCACCCTCCCCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	150810689	150817155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975
ENSMUSG00000041133.12_150810791_150819208_1	chrX	+	1067	7	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	11367	26482	11367	-26482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAAAGAACGTTT	NA	NA	NA	NA	NA	NA	NA	NA	150810790	150819208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097
ENSMUSG00000041133.12_150810835_150819208_1	chrX	+	1023	7	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	11411	26482	11411	-26482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAAAGAACGTTT	NA	NA	NA	NA	NA	NA	NA	NA	150810834	150819208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097
ENSMUSG00000041133.12_150811147_150819458_1	chrX	+	957	7	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	11723	26232	11723	-26232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTGAATCTCCAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	150811146	150819458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336
ENSMUSG00000041133.12_150811970_150820418_1	chrX	+	986	7	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	12546	25272	12546	-25272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCAAGAGAATCATACAGA	NA	NA	NA	NA	NA	NA	NA	NA	150811969	150820418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365
ENSMUSG00000041133.12_150812346_150824375_1	chrX	+	977	8	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	12922	21315	12922	-21315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATCAGTTGAAGGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	150812345	150824375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322
ENSMUSG00000041133.12_150816784_150829714_1	chrX	+	987	8	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	17360	15976	17360	-15976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCAGCACCTGGCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	150816783	150829714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655
ENSMUSG00000041133.12_150816976_150829923_1	chrX	+	1010	8	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	17552	15767	17552	-15767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGAGACCAAACTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	150816975	150829923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890
ENSMUSG00000041133.12_150817052_150829970_1	chrX	+	981	8	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	17628	15720	17628	-15720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGCCTGTAAGATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	150817051	150829970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890
ENSMUSG00000041133.12_150817114_150830020_1	chrX	+	969	8	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	17690	15670	17690	-15670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGATGATATTAGTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	150817113	150830020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890
ENSMUSG00000041133.12_150819096_150830964_1	chrX	+	1064	8	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	19672	14726	19672	-14726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAACTGTGGGTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	150819095	150830964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853
ENSMUSG00000041133.12_150819337_150841931_1	chrX	+	1072	8	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	19913	3759	19913	-3759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCTGGCATTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	150819336	150841931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774
ENSMUSG00000041133.12_150820364_150842366_1	chrX	+	949	8	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	20940	3324	20940	-3324	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGAAAGCGAGCAAAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	150820363	150842366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353
ENSMUSG00000041133.12_150820403_150842504_1	chrX	+	1048	8	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	20979	3186	20979	-3186	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGTAGACTGAAACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	150820402	150842504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353
ENSMUSG00000041133.12_150820460_150842508_1	chrX	+	995	8	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	21036	3182	21036	-3182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGACTGAAACTCCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	150820459	150842508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353
ENSMUSG00000041133.12_150820618_150842776_1	chrX	+	1094	8	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	21194	2914	21194	-2914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTTTGCCTCATAATG	NA	NA	NA	NA	NA	NA	NA	NA	150820617	150842776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623
ENSMUSG00000041133.12_150824389_150844001_1	chrX	+	981	8	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	24965	1689	24965	-1689	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGACGCTGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	150824388	150844001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971
ENSMUSG00000041133.12_150829624_150844399_1	chrX	+	1088	8	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	30200	1291	30200	-1291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAATGGGTTGGGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	150829623	150844399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288
ENSMUSG00000041133.12_150829895_150844818_1	chrX	+	1003	8	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	30471	872	30471	-872	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTCTGGATCCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	150829894	150844818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ENSMUSG00000041133.12_150829958_150844875_1	chrX	+	997	8	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	30534	815	30534	-815	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCTATCATGGATCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	150829957	150844875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ENSMUSG00000041133.12_150830026_150844932_1	chrX	+	986	8	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	30602	758	30602	-758	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGCAAAATAAATATTGG	NA	NA	NA	NA	NA	NA	NA	NA	150830025	150844932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ENSMUSG00000041133.12_150841888_150845163_1	chrX	+	974	6	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	42464	527	42464	-527	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCATGTCTTTCTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	150841887	150845163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ENSMUSG00000041133.12_150842384_150845265_1	chrX	+	1002	5	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	42960	425	42960	-425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGGAAAACTCACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	150842383	150845265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ENSMUSG00000041133.12_150842420_150845340_1	chrX	+	1041	5	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	42996	350	42996	-350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAGAGGCAGTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	150842419	150845340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ENSMUSG00000041133.12_150842716_150845452_1	chrX	+	972	4	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	43292	238	43292	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCCTTCCTCATAGGA	NA	NA	NA	NA	NA	NA	NA	NA	150842715	150845452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150842776_150843971_150844042_150844288_150844400_150844721
ENSMUSG00000041133.12_150843977_150845567_1	chrX	+	1022	3	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	44553	123	44553	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTTCTGACCCTTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	150843976	150845567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150844042_150844288_150844400_150844721
ENSMUSG00000041133.12_150844287_150845690_1	chrX	+	1082	2	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	44863	0	44863	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTAGCTTCAATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	150844286	150845690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_150844400_150844721
ENSMUSG00000041135.16_16123354_16124478_1	chr4	-	592	2	ISM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	39169	621	39169	-621	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCAGTTTCACTACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	16124478	16123353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_16123892_16124424
ENSMUSG00000041135.16_16123401_16124532_1	chr4	-	599	2	ISM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	39115	668	39115	-668	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATATAAGTAAAAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	16124532	16123400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_16123892_16124424
ENSMUSG00000041135.16_16123744_16138126_1	chr4	-	630	6	ISM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	25521	1011	25521	-1011	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAAACCTACAAGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	16138126	16123743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073
ENSMUSG00000041135.16_16123813_16138174_1	chr4	-	609	6	ISM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	25473	1080	25473	-1080	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAACCAATCGCTGGACG	NA	NA	NA	NA	NA	NA	NA	NA	16138174	16123812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073
ENSMUSG00000041135.16_16123867_16138229_1	chr4	-	610	6	ISM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	25418	1134	25418	-1134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTGGATCCAGAGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	16138229	16123866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073
ENSMUSG00000041135.16_16124425_16139254_1	chr4	-	641	6	ISM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	24393	1692	24393	-1692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTATGCTGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	16139254	16124424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204
ENSMUSG00000041135.16_16124528_16151973_1	chr4	-	595	7	ISM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	11674	1795	11674	-1795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTATCGTTTCTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	16151973	16124527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916
ENSMUSG00000041135.16_16129070_16155117_1	chr4	-	579	6	ISM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	8530	6337	8530	-6337	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGATTTATCGCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	16155117	16129069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034
ENSMUSG00000041135.16_16132815_16158300_1	chr4	-	598	6	ISM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	5347	10082	5347	-10082	internal_fragment	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTTGAGGCTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	16158300	16132814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276
ENSMUSG00000041135.16_16138189_16163279_1	chr4	-	621	6	ISM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	368	15456	368	-15456	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACCTGACACCAGTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	16163279	16138188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
ENSMUSG00000041135.16_16151941_16163417_1	chr4	-	638	4	ISM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	230	29208	230	-29208	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGTGAAGCATGATATAT	NA	NA	NA	NA	NA	NA	NA	NA	16163417	16151940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_16152075_16155034_16155191_16158276_16158431_16163223
ENSMUSG00000041135.16_16152028_16163456_1	chr4	-	590	4	ISM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	191	29295	191	-29295	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACGAAGTTACAAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	16163456	16152027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_16152075_16155034_16155191_16158276_16158431_16163223
ENSMUSG00000041143.17_138711029_138779897_1	chr4	+	1398	12	ISM	ENSMUSG00000041143.17	ENST00000375127.5	1735	14	47	5665	47	-5665	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTGGGAGAATCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	138711028	138779897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138711077_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811
ENSMUSG00000041143.17_138717852_138781227_2	chr4	+	1400	12	ISM	ENSMUSG00000041143.17	ENST00000375127.5	1735	14	6870	4335	6870	-4335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCGTGTACCGCACATCT	NA	NA	NA	NA	NA	NA	NA	NA	138717851	138781227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210
ENSMUSG00000041143.17_138717852_138781328_1	chr4	+	1501	12	ISM	ENSMUSG00000041143.17	ENST00000375127.5	1735	14	6870	4234	6870	-4234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTTGGTCTGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	138717851	138781328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210
ENSMUSG00000041143.17_138717994_138785475_1	chr4	+	1412	13	ISM	ENSMUSG00000041143.17	ENST00000375127.5	1735	14	7012	87	7012	-87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCATCCGCACCAAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	138717993	138785475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ENSMUSG00000041143.17_138723757_138785555_1	chr4	+	1394	11	NNC	ENSMUSG00000041143.17	novel	1735	14	NA	NA	12775	-7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCCATAGTCTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	138723756	138785555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_138723900_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ENSMUSG00000041143.17_138723803_138785607_1	chr4	+	1412	12	ISM	ENSMUSG00000041143.17	ENST00000375127.5	1735	14	12821	-45	12821	45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACCTGCCTCAGAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	138723802	138785607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ENSMUSG00000041143.17_138723826_138785630_1	chr4	+	1400	11	NNC	ENSMUSG00000041143.17	novel	2009	14	NA	NA	12844	68	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAACCACCATACCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	138723825	138785630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_138723900_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ENSMUSG00000041143.17_138725332_138785756_1	chr4	+	1483	11	ISM	ENSMUSG00000041143.17	ENST00000294543.11	2009	14	14350	80	14350	-80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCCAACCCACTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	138725331	138785756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ENSMUSG00000041143.17_138737779_138785756_1	chr4	+	1453	10	ISM	ENSMUSG00000041143.17	ENST00000294543.11	2009	14	26797	80	26797	-80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCCAACCCACTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	138737778	138785756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ENSMUSG00000041147.11_150466254_150471459_1	chr5	+	819	3	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	4131	21334	4131	-21334	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGACCCTTCTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	150466253	150471459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150466923_150468359_150468456_150471405
ENSMUSG00000041147.11_150466476_150472153_1	chr5	+	813	4	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	4353	20640	4353	-20640	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCCCGCCTTTCAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	150466475	150472153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150466923_150468359_150468456_150471405_150471476_150471953
ENSMUSG00000041147.11_150466516_150472221_1	chr5	+	841	4	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	4393	20572	4393	-20572	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGGAGGGAAAGAACCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	150466515	150472221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150466923_150468359_150468456_150471405_150471476_150471953
ENSMUSG00000041147.11_150466614_150472287_1	chr5	+	809	4	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	4491	20506	4491	-20506	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTAACAAAGGTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	150466613	150472287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150466923_150468359_150468456_150471405_150471476_150471953
ENSMUSG00000041147.11_150466723_150474351_1	chr5	+	815	5	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	4600	18442	4600	-18442	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAAAGGCGACATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	150466722	150474351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150466923_150468359_150468456_150471405_150471476_150471953_150472348_150474296
ENSMUSG00000041147.11_150466840_150474464_1	chr5	+	811	5	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	4717	18329	4717	-18329	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTCCTAAGCAGGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	150466839	150474464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150466923_150468359_150468456_150471405_150471476_150471953_150472348_150474296
ENSMUSG00000041147.11_150468391_150475780_1	chr5	+	820	5	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	6268	17013	6268	-17013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGGCTTTCAGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	150468390	150475780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150468456_150471405_150471476_150471953_150472348_150474296_150474479_150475671
ENSMUSG00000041147.11_150471987_150476492_1	chr5	+	822	4	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	9864	16301	9864	-16301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGAATTTGCTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	150471986	150476492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150472348_150474296_150474479_150475671_150475860_150476401
ENSMUSG00000041147.11_150472141_150477679_1	chr5	+	812	5	NNC	ENSMUSG00000041147.11	novel	7969	17	NA	NA	10018	-15114	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACACAGCTGCAAAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	150472140	150477679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_150472348_150474296_150474479_150475671_150475860_150476401_150476577_150477619
ENSMUSG00000041147.11_150472174_150477796_1	chr5	+	896	5	NNC	ENSMUSG00000041147.11	novel	7969	17	NA	NA	10051	-14997	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCGAACTCACAGATGGGT	NA	NA	NA	NA	NA	NA	NA	NA	150472173	150477796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_150472348_150474296_150474479_150475671_150475860_150476401_150476577_150477619
ENSMUSG00000041147.11_150472263_150477815_1	chr5	+	826	5	NNC	ENSMUSG00000041147.11	novel	7969	17	NA	NA	10140	-14978	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTACGCTGTCAGGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	150472262	150477815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_150472348_150474296_150474479_150475671_150475860_150476401_150476577_150477619
ENSMUSG00000041147.11_150474442_150480399_1	chr5	+	825	5	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	12319	12394	12319	-12394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCCTTGTCCTCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	150474441	150480399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325
ENSMUSG00000041147.11_150476477_150481916_1	chr5	+	814	5	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	14354	10877	14354	-10877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGGAGCAGAGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	150476476	150481916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854
ENSMUSG00000041147.11_150477617_150483545_1	chr5	+	858	5	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	15494	9248	15494	-9248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAGAATTCCGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	150477616	150483545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468
ENSMUSG00000041147.11_150477783_150483911_1	chr5	+	827	6	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	15660	8882	15660	-8882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCATCAGACTTATCCT	NA	NA	NA	NA	NA	NA	NA	NA	150477782	150483911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892
ENSMUSG00000041147.11_150477840_150483962_1	chr5	+	821	6	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	15717	8831	15717	-8831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCATCTTGCAGTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	150477839	150483962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892
ENSMUSG00000041147.11_150477913_150484026_1	chr5	+	812	6	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	15790	8767	15790	-8767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAGAACTCAGTATCA	NA	NA	NA	NA	NA	NA	NA	NA	150477912	150484026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892
ENSMUSG00000041147.11_150480567_150490403_1	chr5	+	813	6	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	18444	2390	18444	-2390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTCGGGATAGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	150480566	150490403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352
ENSMUSG00000041147.11_150480624_150490460_1	chr5	+	813	6	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	18501	2333	18501	-2333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCTCCAGTGCCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	150480623	150490460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352
ENSMUSG00000041147.11_150480679_150490527_1	chr5	+	825	6	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	18556	2266	18556	-2266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTGCCAGTCCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	150480678	150490527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352
ENSMUSG00000041147.11_150483467_150491117_1	chr5	+	786	5	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	21344	1676	21344	-1676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGAGGGAGACAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	150483466	150491117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071
ENSMUSG00000041147.11_150483608_150492444_1	chr5	+	802	6	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	21485	349	21485	-349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACACTGCACACTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	150483607	150492444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ENSMUSG00000041147.11_150483965_150492594_1	chr5	+	826	5	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	21842	199	21842	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCGGTCAGTCCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	150483964	150492594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ENSMUSG00000041147.11_150484026_150492645_1	chr5	+	816	5	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	21903	148	21903	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGCCGCCACGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	150484025	150492645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ENSMUSG00000041147.11_150484177_150492797_1	chr5	+	910	4	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	22054	-4	22054	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCAGGCCCTTACGCCT	NA	NA	NA	NA	NA	NA	NA	NA	150484176	150492797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150484289_150490352_150490595_150491071_150491234_150492403
ENSMUSG00000041147.11_150484244_150492797_1	chr5	+	843	4	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	22121	-4	22121	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCAGGCCCTTACGCCT	NA	NA	NA	NA	NA	NA	NA	NA	150484243	150492797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_150484289_150490352_150490595_150491071_150491234_150492403
ENSMUSG00000041153.10_15997121_16005488_1	chr4	-	2104	3	ISM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	8400	0	8400	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTGCCCTTTCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	16005488	15997120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_15999001_16001929_16002022_16005356
ENSMUSG00000041153.10_15997227_16006498_1	chr4	-	2200	4	ISM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	7390	106	7390	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCTTGTGTGAACACTG	NA	NA	NA	NA	NA	NA	NA	NA	16006498	15997226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356
ENSMUSG00000041153.10_15997380_16008650_1	chr4	-	2092	5	ISM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	5238	259	5238	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTGATATCTTTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	16008650	15997379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600
ENSMUSG00000041153.10_15997417_16008720_1	chr4	-	2125	5	ISM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	5168	296	5168	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATATTTTTACAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	16008720	15997416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600
ENSMUSG00000041153.10_15997482_16008755_1	chr4	-	2095	5	ISM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	5133	361	5133	-361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTTTATTTATTTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	16008755	15997481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600
ENSMUSG00000041153.10_15997635_16013796_1	chr4	-	2052	6	FSM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	92	514	92	-514	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCTGTAGCTCATTAGG	NA	NA	NA	NA	NA	NA	NA	NA	16013796	15997634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
ENSMUSG00000041164.16_6339471_6353845_1	chr11	+	2406	17	ISM	ENSMUSG00000041164.16	ENST00000309315.9	4180	19	98	2467	0	-437	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAACCTTGCTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	6339470	6353845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6339514_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785
ENSMUSG00000041164.16_6345605_6351150_1	chr11	+	1788	12	ISM	ENSMUSG00000041164.16	ENST00000615423.1	2664	17	-24	3132	0	-3132	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATGGGGTGGAGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	6345604	6351150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349943_6350769_6350876_6351097
ENSMUSG00000041164.16_6345757_6351255_1	chr11	+	1820	11	ISM	ENSMUSG00000041164.16	ENST00000615423.1	2664	17	128	3027	128	-3027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGGTCCCTGTAGACA	NA	NA	NA	NA	NA	NA	NA	NA	6345756	6351255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349943_6350769_6350876_6351097
ENSMUSG00000041164.16_6345784_6354151_1	chr11	+	2448	16	ISM	ENSMUSG00000041164.16	ENSMUST00000109786.8	4319	21	6313	2007	155	-131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATCCCGGCAGCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6345783	6354151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039
ENSMUSG00000041164.16_6345858_6352459_1	chr11	+	1772	12	ISM	ENSMUSG00000041164.16	ENST00000615423.1	2664	17	229	1823	229	-1823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCCGGTATGCAAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	6345857	6352459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349943_6350769_6350876_6351097_6351256_6352406
ENSMUSG00000041164.16_6346230_6352872_1	chr11	+	1843	12	ISM	ENSMUSG00000041164.16	ENST00000615423.1	2664	17	601	1410	601	-1410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTCTTCCTGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	6346229	6352872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349943_6350769_6350876_6351097_6351256_6352406_6352475_6352803
ENSMUSG00000041164.16_6346361_6353171_1	chr11	+	1764	13	ISM	ENSMUSG00000041164.16	ENST00000615423.1	2664	17	732	1111	732	-1111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGAAGCCTGACCTACA	NA	NA	NA	NA	NA	NA	NA	NA	6346360	6353171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349943_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119
ENSMUSG00000041164.16_6346421_6353264_1	chr11	+	1797	13	ISM	ENSMUSG00000041164.16	ENST00000615423.1	2664	17	792	1018	792	-1018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGATGGAGATGATTGC	NA	NA	NA	NA	NA	NA	NA	NA	6346420	6353264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349943_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119
ENSMUSG00000041164.16_6346729_6353840_1	chr11	+	1874	13	ISM	ENSMUSG00000041164.16	ENST00000615423.1	2664	17	1100	442	1100	-442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACCCCAAACCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	6346728	6353840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349943_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785
ENSMUSG00000041164.16_6347162_6354060_1	chr11	+	1757	13	ISM	ENSMUSG00000041164.16	ENST00000615423.1	2664	17	1533	222	1533	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGCCCATAATCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	6347161	6354060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349943_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039
ENSMUSG00000041164.16_6347223_6354102_1	chr11	+	1738	13	ISM	ENSMUSG00000041164.16	ENST00000615423.1	2664	17	1594	180	1594	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCGGGCCCACCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	6347222	6354102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349943_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039
ENSMUSG00000041164.16_6347266_6354169_1	chr11	+	1762	13	ISM	ENSMUSG00000041164.16	ENST00000615423.1	2664	17	1637	113	1637	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGCCAACCAAACACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	6347265	6354169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349943_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039
ENSMUSG00000041164.16_6347505_6354282_1	chr11	+	1853	12	ISM	ENSMUSG00000041164.16	ENST00000615423.1	2664	17	1876	0	1876	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTAGCCAGTCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	6347504	6354282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349943_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039
ENSMUSG00000041164.16_6347612_6354282_1	chr11	+	1746	12	ISM	ENSMUSG00000041164.16	ENST00000615423.1	2664	17	1983	0	1983	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTAGCCAGTCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	6347611	6354282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349943_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039
ENSMUSG00000041164.16_6349592_6356158_1	chr11	+	2496	10	ISM	ENSMUSG00000041164.16	ENSMUST00000109785.2	3542	17	3987	-228	3963	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCTCAGGATATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	6349591	6356158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ENSMUSG00000041164.16_6349832_6356285_1	chr11	+	2457	9	ISM	ENSMUSG00000041164.16	ENSMUST00000109785.2	3542	17	4227	-355	4203	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTCCCTGGGTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	6349831	6356285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ENSMUSG00000041164.16_6349916_6356312_1	chr11	+	2400	9	ISM	ENSMUSG00000041164.16	ENSMUST00000109785.2	3542	17	4311	-382	4287	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGCCAGCTATCTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	6349915	6356312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ENSMUSG00000041168.11_56921297_56926211_1	chr17	-	1643	11	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	7398	-94	7398	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	56926211	56921296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171
ENSMUSG00000041168.11_56921297_56926267_1	chr17	-	1699	11	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	7342	-94	7342	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	56926267	56921296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171
ENSMUSG00000041168.11_56921527_56927043_1	chr17	-	1652	12	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	6566	136	6566	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGAACAGAAAGGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	56927043	56921526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985
ENSMUSG00000041168.11_56921714_56927357_1	chr17	-	1698	12	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	6252	323	6252	-323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGCTATGACTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	56927357	56921713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222
ENSMUSG00000041168.11_56921970_56929001_1	chr17	-	1650	13	ISM	ENSMUSG00000041168.11	ENSMUST00000047226.10	2951	18	4886	673	4608	-579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATAGCCTACACCTATGC	NA	NA	NA	NA	NA	NA	NA	NA	56929001	56921969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923
ENSMUSG00000041168.11_56922283_56929451_1	chr17	-	1670	13	ISM	ENSMUSG00000041168.11	ENSMUST00000047226.10	2951	18	4436	986	4158	-892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGTCATGGGTTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	56929451	56922282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433
ENSMUSG00000041168.11_56922349_56929503_1	chr17	-	1656	13	ISM	ENSMUSG00000041168.11	ENSMUST00000047226.10	2951	18	4384	1052	4106	-958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTACAAGACTTTGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	56929503	56922348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433
ENSMUSG00000041168.11_56922402_56929553_1	chr17	-	1653	13	ISM	ENSMUSG00000041168.11	ENSMUST00000047226.10	2951	18	4334	1105	4056	-1011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATACAAGATCGTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	56929553	56922401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433
ENSMUSG00000041168.11_56922599_56933514_1	chr17	-	1667	14	ISM	ENSMUSG00000041168.11	ENSMUST00000047226.10	2951	18	373	1302	95	-1208	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCCCAGCTGTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	56933514	56922598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ENSMUSG00000041168.11_56923015_56933632_1	chr17	-	1650	13	ISM	ENSMUSG00000041168.11	ENSMUST00000047226.10	2951	18	255	1718	-23	-1624	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACACCATCCCAGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	56933632	56923014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ENSMUSG00000041168.11_56923194_56933875_1	chr17	-	1801	12	ISM	ENSMUSG00000041168.11	ENSMUST00000047226.10	2951	18	12	1897	12	-1803	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCCTGAGCAGAATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	56933875	56923193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ENSMUSG00000041187.17_16576827_16589879_1	chr7	+	2023	11	ISM	ENSMUSG00000041187.17	ENST00000433867.5	3156	19	-18	14172	0	-14172	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCCCTACCTGGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	16576826	16589879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_16577128_16577406_16577789_16579743_16579883_16581525_16581658_16582649_16582805_16582905_16583132_16583949_16584028_16584118_16584273_16587179_16587298_16587875_16587954_16589619
ENSMUSG00000041187.17_16576990_16591692_1	chr7	+	2002	14	ISM	ENSMUSG00000041187.17	ENST00000433867.5	3156	19	145	12359	0	-12359	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGAGACGTTGCAGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	16576989	16591692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_16577128_16577406_16577789_16579743_16579883_16581525_16581658_16582649_16582805_16582905_16583132_16583949_16584028_16584118_16584273_16587179_16587298_16587875_16587954_16589619_16589879_16590184_16590238_16590750_16590824_16591675
ENSMUSG00000041187.17_16577425_16592319_1	chr7	+	1952	14	ISM	ENSMUSG00000041187.17	ENST00000433867.5	3156	19	580	11732	435	-11732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTGAACCTCGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	16577424	16592319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_16577789_16579743_16579883_16581525_16581658_16582649_16582805_16582905_16583132_16583949_16584028_16584118_16584273_16587179_16587298_16587875_16587954_16589619_16589879_16590184_16590238_16590750_16590824_16591675_16591783_16592303
ENSMUSG00000041187.17_16577483_16592389_1	chr7	+	1964	14	ISM	ENSMUSG00000041187.17	ENST00000433867.5	3156	19	638	11662	493	-11662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGTTGGAGATGATCC	NA	NA	NA	NA	NA	NA	NA	NA	16577482	16592389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_16577789_16579743_16579883_16581525_16581658_16582649_16582805_16582905_16583132_16583949_16584028_16584118_16584273_16587179_16587298_16587875_16587954_16589619_16589879_16590184_16590238_16590750_16590824_16591675_16591783_16592303
ENSMUSG00000041187.17_16579726_16599816_1	chr7	+	2056	15	ISM	ENSMUSG00000041187.17	ENST00000433867.5	3156	19	2881	4235	2736	-4235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGATACAGAACGCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	16579725	16599816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_16579883_16581525_16581658_16582649_16582805_16582905_16583132_16583949_16584028_16584118_16584273_16587179_16587298_16587875_16587954_16589619_16589879_16590184_16590238_16590750_16590824_16591675_16591783_16592303_16592466_16597865_16597965_16599611
ENSMUSG00000041187.17_16581560_16603428_1	chr7	+	1944	15	ISM	ENSMUSG00000041187.17	ENST00000433867.5	3156	19	4715	623	4570	-623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTGTTGCAGGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	16581559	16603428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_16581658_16582649_16582805_16582905_16583132_16583949_16584028_16584118_16584273_16587179_16587298_16587875_16587954_16589619_16589879_16590184_16590238_16590750_16590824_16591675_16591783_16592303_16592466_16597865_16597965_16599611_16599880_16603412
ENSMUSG00000041187.17_16582634_16603815_1	chr7	+	2000	15	ISM	ENSMUSG00000041187.17	ENST00000433867.5	3156	19	5789	236	5644	-236	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGACGACGCACGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	16582633	16603815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_16582805_16582905_16583132_16583949_16584028_16584118_16584273_16587179_16587298_16587875_16587954_16589619_16589879_16590184_16590238_16590750_16590824_16591675_16591783_16592303_16592466_16597865_16597965_16599611_16599880_16603412_16603499_16603747
ENSMUSG00000041187.17_16583007_16604061_1	chr7	+	1974	14	ISM	ENSMUSG00000041187.17	ENST00000433867.5	3156	19	6162	-10	6017	10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTTCCCAGGGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	16583006	16604061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_16583132_16583949_16584028_16584118_16584273_16587179_16587298_16587875_16587954_16589619_16589879_16590184_16590238_16590750_16590824_16591675_16591783_16592303_16592466_16597865_16597965_16599611_16599880_16603412_16603499_16603747
ENSMUSG00000041189.10_69674982_69675944_1	chr11	-	675	2	ISM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	10825	120	10825	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGTCCTAGCCCATAAG	NA	NA	NA	NA	NA	NA	NA	NA	69675944	69674981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69675588_69675875
ENSMUSG00000041189.10_69675048_69675992_1	chr11	-	657	2	ISM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	10777	186	10777	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTAGACTGTAAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	69675992	69675047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69675588_69675875
ENSMUSG00000041189.10_69675326_69676705_1	chr11	-	583	3	ISM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	10064	464	10064	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGACCCACCCGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	69676705	69675325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69675588_69675875_69676024_69676532
ENSMUSG00000041189.10_69675536_69683573_1	chr11	-	646	5	ISM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	3196	674	3196	-674	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATTCATCGTTTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	69683573	69675535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69675588_69675875_69676024_69676532_69676706_69677706_69677931_69683524
ENSMUSG00000041189.10_69676644_69684760_1	chr11	-	695	5	ISM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	2009	1782	2009	-1782	internal_fragment	TRUE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCCTGAACCACATCACT	NA	NA	NA	NA	NA	NA	NA	NA	69684760	69676643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69676706_69677706_69677931_69683524_69683735_69684290_69684439_69684709
ENSMUSG00000041189.10_69677834_69685096_1	chr11	-	685	5	ISM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	1673	2972	1673	-2972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCATTATCAAGTACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	69685096	69677833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69677931_69683524_69683735_69684290_69684439_69684709_69684819_69684975
ENSMUSG00000041199.4_25947193_25949361_1	chr17	+	418	4	FSM	ENSMUSG00000041199.4	ENST00000565809.5	825	4	11	396	11	-396	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACTGCAGTGCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	25947192	25949361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25947366_25947496_25947621_25948041_25948144_25949342
ENSMUSG00000041199.4_25947255_25949402_1	chr17	+	397	4	FSM	ENSMUSG00000041199.4	ENST00000565809.5	825	4	73	355	73	-355	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTATGGCCAGGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	25947254	25949402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25947366_25947496_25947621_25948041_25948144_25949342
ENSMUSG00000041199.4_25947308_25949455_1	chr17	+	397	4	FSM	ENSMUSG00000041199.4	ENST00000565809.5	825	4	126	302	126	-302	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCCTTCTACCTACGCAT	NA	NA	NA	NA	NA	NA	NA	NA	25947307	25949455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25947366_25947496_25947621_25948041_25948144_25949342
ENSMUSG00000041203.10_85753597_85756583_1	chr8	+	402	3	FSM	ENSMUSG00000041203.10	ENST00000588213.1	810	3	80	328	78	-328	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAAACTCGGCCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	85753596	85756583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85753841_85756167_85756246_85756503
ENSMUSG00000041203.10_85753621_85756660_1	chr8	+	400	2	FSM	ENSMUSG00000041203.10	ENST00000592273.5	757	2	102	255	102	-251	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGCGGTTCCGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	85753620	85756660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85753864_85756503
ENSMUSG00000041203.10_85753652_85756642_1	chr8	+	406	3	FSM	ENSMUSG00000041203.10	ENST00000588213.1	810	3	135	269	133	-269	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCGATGTACATAATATT	NA	NA	NA	NA	NA	NA	NA	NA	85753651	85756642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85753841_85756167_85756246_85756503
ENSMUSG00000041203.10_85753706_85756693_1	chr8	+	403	3	FSM	ENSMUSG00000041203.10	ENST00000588213.1	810	3	189	218	187	-218	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACTGATACACAGAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	85753705	85756693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85753841_85756167_85756246_85756503
ENSMUSG00000041219.15_113662378_113678642_1	chr2	-	4112	12	FSM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	359	487	0	-487	multi-exon	FALSE	canonical	NA	NA	NA	NA	2004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATTCCTTCACATCAG	NA	NA	NA	NA	NA	NA	NA	NA	113678642	113662377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ENSMUSG00000041219.15_113664280_113667897_1	chr2	-	900	4	ISM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	11104	2389	7773	-674	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAATGTTACTCAACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	113667897	113664279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770
ENSMUSG00000041219.15_113664482_113671078_1	chr2	-	901	6	ISM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	7923	2591	4592	498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTGGGAGTGATCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	113671078	113664481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043
ENSMUSG00000041219.15_113664581_113671118_1	chr2	-	842	6	ISM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	7883	2690	4552	399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCCATAGCCAGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	113671118	113664580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043
ENSMUSG00000041219.15_113664759_113672290_1	chr2	-	847	8	ISM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	6711	2868	3380	221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGATGGAACAGGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	113672290	113664758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251
ENSMUSG00000041219.15_113664980_113671118_1	chr2	-	758	5	ISM	ENSMUSG00000041219.15	ENSMUST00000110947.2	3199	11	7524	1374	4552	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTATCTGGGGGATGCG	NA	NA	NA	NA	NA	NA	NA	NA	113671118	113664979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043
ENSMUSG00000041219.15_113665122_113672415_1	chr2	-	924	7	ISM	ENSMUSG00000041219.15	ENSMUST00000110947.2	3199	11	6227	1516	3255	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTACACAATACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	113672415	113665121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251
ENSMUSG00000041219.15_113665211_113673070_1	chr2	-	875	8	ISM	ENSMUSG00000041219.15	ENSMUST00000110947.2	3199	11	5572	1605	2600	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATCAGCAAAATCTAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	113673070	113665210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030
ENSMUSG00000041219.15_113667206_113673116_1	chr2	-	875	7	ISM	ENSMUSG00000041219.15	ENST00000543522.5	2877	11	2554	3926	2554	-2226	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTTCTTGAGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	113673116	113667205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030
ENSMUSG00000041219.15_113667770_113673284_1	chr2	-	933	6	ISM	ENSMUSG00000041219.15	ENST00000543522.5	2877	11	2386	4490	2386	-2790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTGTCTAAGATGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	113673284	113667769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030
ENSMUSG00000041219.15_113670115_113675632_1	chr2	-	840	7	ISM	ENSMUSG00000041219.15	ENST00000543522.5	2877	11	38	6835	38	-5135	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTCGAGTAAGAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	113675632	113670114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599
ENSMUSG00000041219.15_113673177_113678768_1	chr2	-	739	4	ISM	ENSMUSG00000041219.15	ENST00000567348.5	2138	11	183	8197	-126	-8197	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGCATGAAGCACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	113678768	113673176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113673285_113673591_113673689_113675599_113675671_113678305
ENSMUSG00000041220.11_129326035_129427382_1	chr3	+	1189	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	0	4762	0	-1219	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCCTGTCAACTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	129326034	129427382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
ENSMUSG00000041220.11_129326376_129427517_1	chr3	+	1135	4	FSM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	372	1103	341	-1084	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTTGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	129326375	129427517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_129326418_129398689_129398822_129421931_129422084_129426708
ENSMUSG00000041220.11_129422016_129427776_1	chr3	+	1136	2	ISM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	96012	844	95981	-825	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTTACTGCAACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	129422015	129427776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_129422084_129426708
ENSMUSG00000041220.11_129422068_129427842_1	chr3	+	1150	2	ISM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	96064	778	96033	-759	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTCGCTACAACCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	129422067	129427842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_129422084_129426708
ENSMUSG00000041225.17_6025197_6112135_1	chr18	-	3657	17	NNC	ENSMUSG00000041225.17	novel	4162	20	NA	NA	228	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAATGTGCGTTTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	6112135	6025196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057508_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684
ENSMUSG00000041231.16_44345400_44361325_1	chr11	-	2081	11	NNC	ENSMUSG00000041231.16	novel	2088	11	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTATCTGTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	44361325	44345399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_44346443_44347190_44347314_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357839_44361254
ENSMUSG00000041231.16_44345400_44361325_2	chr11	-	2079	11	NNC	ENSMUSG00000041231.16	novel	2088	11	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTATCTGTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	44361325	44345399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357648_44357839_44361254
ENSMUSG00000041236.9_18907354_19048282_1	chr13	+	2389	26	ISM	ENSMUSG00000041236.9	ENST00000395969.6	2487	28	5868	2088	5868	-2088	internal_fragment	TRUE	canonical	NA	NA	NA	NA	982	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTGTCAGCCATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	18907353	19048282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_18907397_18923611_18923717_18929431_18929510_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202
ENSMUSG00000041236.9_18923610_19048282_1	chr13	+	2348	25	ISM	ENSMUSG00000041236.9	ENST00000395969.6	2487	28	22124	2088	22124	-2088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTGTCAGCCATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	18923609	19048282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_18923717_18929431_18929510_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202
ENSMUSG00000041236.9_18923610_19050370_1	chr13	+	2429	26	ISM	ENSMUSG00000041236.9	ENST00000395969.6	2487	28	22124	0	22124	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCCTGCCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	18923609	19050370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_18923717_18929431_18929510_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ENSMUSG00000041236.9_18923643_19027732_1	chr13	+	1550	17	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	22183	23249	22157	-22638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGCTCCATCAAGGATAA	NA	NA	NA	NA	NA	NA	NA	NA	18923642	19027732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638
ENSMUSG00000041236.9_18929430_19050370_1	chr13	+	2324	25	ISM	ENSMUSG00000041236.9	ENST00000395969.6	2487	28	27944	0	27944	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCCTGCCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	18929429	19050370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_18929510_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ENSMUSG00000041236.9_18966853_19033095_1	chr13	+	1546	18	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	65393	17886	65367	-17275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCGCTACCATGAAAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	18966852	19033095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055
ENSMUSG00000041236.9_19022826_19050526_1	chr13	+	1532	15	ISM	ENSMUSG00000041236.9	ENST00000395969.6	2487	28	121340	-156	121340	156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACCGATGGAGAAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	19022825	19050526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ENSMUSG00000041236.9_19027639_19050981_1	chr13	+	1626	11	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	126179	0	126153	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATTGTGTTGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	19027638	19050981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ENSMUSG00000041261.10_8144585_8169692_1	chr4	-	1729	2	ISM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	69349	1223	69349	-1223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGATATCTAGACGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	8169692	8144584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_8146217_8169595
ENSMUSG00000041261.10_8144865_8189315_1	chr4	-	1766	6	ISM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	49726	1503	49726	-1503	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCAGCCATGACTATG	NA	NA	NA	NA	NA	NA	NA	NA	8189315	8144864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296
ENSMUSG00000041261.10_8144954_8189361_1	chr4	-	1723	6	ISM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	49680	1592	49680	-1592	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTTAAAATATAGGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	8189361	8144953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296
ENSMUSG00000041261.10_8145029_8189392_1	chr4	-	1679	6	ISM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	49649	1667	49649	-1667	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCAGGGTCTCTGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	8189392	8145028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296
ENSMUSG00000041261.10_8145176_8237995_1	chr4	-	1734	8	ISM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	1046	1814	1046	-1814	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATCACAAGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	8237995	8145175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918
ENSMUSG00000041261.10_8145328_8238864_1	chr4	-	1710	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	177	1966	177	-1966	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAATGGAAGAAAGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	8238864	8145327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
ENSMUSG00000041261.10_8145383_8238924_1	chr4	-	1715	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	117	2021	117	-2021	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATCTTCAGTCATATCT	NA	NA	NA	NA	NA	NA	NA	NA	8238924	8145382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
ENSMUSG00000041261.10_8145440_8239041_1	chr4	-	1775	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	0	2078	0	-2078	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCACATCTGTAGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	8239041	8145439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
ENSMUSG00000041263.15_88991288_88995093_1	chr3	-	861	3	ISM	ENSMUSG00000041263.15	ENST00000471876.5	1433	7	1776	2	1776	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATATGTGTCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	88995093	88991287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88991958_88994079_88994203_88995025
ENSMUSG00000041263.15_88991420_88995149_1	chr3	-	785	3	ISM	ENSMUSG00000041263.15	ENST00000471876.5	1433	7	1720	134	1720	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTTGCCTGTATTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	88995149	88991419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88991958_88994079_88994203_88995025
ENSMUSG00000041263.15_88991590_88996323_1	chr3	-	787	5	ISM	ENSMUSG00000041263.15	ENST00000471876.5	1433	7	546	304	546	-302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACAGGATTCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	88996323	88991589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88991958_88994079_88994203_88995025_88995258_88996106_88996154_88996306
ENSMUSG00000041263.15_88991645_88996373_1	chr3	-	782	5	ISM	ENSMUSG00000041263.15	ENST00000471876.5	1433	7	496	359	496	-357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACCCACCTGTGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	88996373	88991644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88991958_88994079_88994203_88995025_88995258_88996106_88996154_88996306
ENSMUSG00000041263.15_88991748_88996561_1	chr3	-	796	6	ISM	ENSMUSG00000041263.15	ENST00000471876.5	1433	7	308	462	308	-460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGAACTTACCATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	88996561	88991747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88991958_88994079_88994203_88995025_88995258_88996106_88996154_88996306_88996413_88996483
ENSMUSG00000041263.15_88991900_88996832_1	chr3	-	782	7	FSM	ENSMUSG00000041263.15	ENST00000471876.5	1433	7	37	614	37	-612	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGGGAATTGCTTCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	88996832	88991899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_88991958_88994079_88994203_88995025_88995258_88996106_88996154_88996306_88996413_88996483_88996659_88996791
ENSMUSG00000041263.15_88996122_88998602_1	chr3	-	647	6	ISM	ENSMUSG00000041263.15	ENSMUST00000052539.13	3316	10	2016	4834	-1250	-4834	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGAGGATGCAGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	88998602	88996121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88998444
ENSMUSG00000041263.15_88996546_88998869_1	chr3	-	714	4	ISM	ENSMUSG00000041263.15	ENSMUST00000052539.13	3316	10	1749	5258	-1517	-5258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATCACTGGACAGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	88998869	88996545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88996659_88996791_88996869_88996975_88997075_88998444
ENSMUSG00000041264.17_149121160_149150843_1	chr5	+	2397	8	FSM	ENSMUSG00000041264.17	ENSMUST00000121416.8	3792	8	0	1395	0	-1223	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGCAACTGAGAAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	149121159	149150843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUSG00000041264.17_149121370_149151002_1	chr5	+	2346	8	FSM	ENSMUSG00000041264.17	ENSMUST00000121416.8	3792	8	210	1236	0	-1064	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCGGAAAGAAGATCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	149121369	149151002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUSG00000041264.17_149121476_149151050_1	chr5	+	2288	8	FSM	ENSMUSG00000041264.17	ENSMUST00000121416.8	3792	8	316	1188	0	-1016	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGAGCAGGGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	149121475	149151050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUSG00000041268.18_54272544_54274907_1	chr9	-	1438	2	ISM	ENSMUSG00000041268.18	ENST00000543779.6	10278	43	133832	0	133832	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTAGTTTGGCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	54274907	54272543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54273912_54274837
ENSMUSG00000041268.18_54272544_54274967_1	chr9	-	1498	2	ISM	ENSMUSG00000041268.18	ENST00000543779.6	10278	43	133772	0	133772	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTAGTTTGGCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	54274967	54272543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54273912_54274837
ENSMUSG00000041268.18_54272936_54282580_1	chr9	-	1435	6	ISM	ENSMUSG00000041268.18	ENST00000543779.6	10278	43	126159	392	126159	-392	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATGTTGAAACTACACC	NA	NA	NA	NA	NA	NA	NA	NA	54282580	54272935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54273912_54274837_54275056_54276493_54276547_54277155_54277248_54281936_54282015_54282562
ENSMUSG00000041268.18_54273262_54286017_1	chr9	-	1439	9	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	122763	-133	122722	133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGCTCTAGAGCACCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	54286017	54273261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54273912_54274837_54275056_54276493_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997
ENSMUSG00000041268.18_54273512_54288280_1	chr9	-	1467	11	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	120459	-147	120459	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTATACTGATGTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	54288280	54273511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54273912_54274837_54275056_54276493_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54288191
ENSMUSG00000041268.18_54273659_54289177_1	chr9	-	1390	12	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	119562	0	119562	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATGTAGGAATTAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	54289177	54273658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54273912_54274837_54275056_54276493_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54288191_54288310_54289136
ENSMUSG00000041268.18_54273826_54289976_1	chr9	-	1441	13	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	118763	167	118763	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATGCAGATTGCTATCA	NA	NA	NA	NA	NA	NA	NA	NA	54289976	54273825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54273912_54274837_54275056_54276493_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54288191_54288310_54289136_54289339_54289919
ENSMUSG00000041268.18_54274958_54294764_1	chr9	-	1463	14	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	113975	1299	113975	-1299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATCAGACAGAGACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	54294764	54274957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54275056_54276493_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54288191_54288310_54289136_54289339_54289919_54290006_54290940_54291072_54294696
ENSMUSG00000041268.18_54275029_54294806_1	chr9	-	1434	14	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	113933	1370	113933	-1370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTACTCCAATATGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	54294806	54275028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54275056_54276493_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54288191_54288310_54289136_54289339_54289919_54290006_54290940_54291072_54294696
ENSMUSG00000041268.18_54286037_54307324_1	chr9	-	1439	11	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	101415	12378	101415	-12378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGGATCGGAGAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	54307324	54286036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54286120_54286200_54286288_54288191_54288310_54289136_54289339_54289919_54290006_54290940_54291072_54294696_54294876_54300911_54301161_54303523_54303652_54305330_54305408_54307225
ENSMUSG00000041268.18_54289209_54308462_1	chr9	-	1434	9	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	100277	15550	100277	-15550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCAGTGGGAGCGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	54308462	54289208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54289339_54289919_54290006_54290940_54291072_54294696_54294876_54300911_54301161_54303523_54303652_54305330_54305408_54307225_54307418_54308200
ENSMUSG00000041268.18_54289275_54308526_1	chr9	-	1432	9	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	100213	15616	100213	-15616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGCAGGAGAAAATGGATC	NA	NA	NA	NA	NA	NA	NA	NA	54308526	54289274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54289339_54289919_54290006_54290940_54291072_54294696_54294876_54300911_54301161_54303523_54303652_54305330_54305408_54307225_54307418_54308200
ENSMUSG00000041268.18_54290984_54308724_1	chr9	-	1437	7	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	100015	17325	100015	-17325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGACACACAAATACAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	54308724	54290983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54291072_54294696_54294876_54300911_54301161_54303523_54303652_54305330_54305408_54307225_54307418_54308200
ENSMUSG00000041268.18_54294819_54308951_1	chr9	-	1454	6	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	99788	21160	99788	-21160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTCCCTGGGAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	54308951	54294818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54294876_54300911_54301161_54303523_54303652_54305330_54305408_54307225_54307418_54308200
ENSMUSG00000041268.18_54301022_54309103_1	chr9	-	1439	5	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	99636	27363	99636	-27363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTCGGCTTGCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	54309103	54301021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54301161_54303523_54303652_54305330_54305408_54307225_54307418_54308200
ENSMUSG00000041268.18_54303607_54311291_1	chr9	-	1435	5	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	97448	29948	97448	-29948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTAAGTGATCGACGAC	NA	NA	NA	NA	NA	NA	NA	NA	54311291	54303606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54303652_54305330_54305408_54307225_54307418_54308200_54309271_54311240
ENSMUSG00000041268.18_54307364_54313076_1	chr9	-	1434	4	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	95663	33705	95663	-33705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTTCAGCAAGTATCGC	NA	NA	NA	NA	NA	NA	NA	NA	54313076	54307363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54307418_54308200_54309271_54311240_54311506_54313031
ENSMUSG00000041268.18_54308398_54316471_1	chr9	-	1439	5	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	92268	34739	92268	-34739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATGAGCGCCACCAAATA	NA	NA	NA	NA	NA	NA	NA	NA	54316471	54308397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54309271_54311240_54311506_54313031_54313198_54313880_54313979_54316434
ENSMUSG00000041268.18_54308597_54318964_1	chr9	-	1454	6	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	89775	34938	89775	-34938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGCTACAGGTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	54318964	54308596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54309271_54311240_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883
ENSMUSG00000041268.18_54308737_54322811_1	chr9	-	1442	7	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	85969	35342	85928	-35078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGCAGAGTGCCTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	54322811	54308736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54309271_54311240_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713
ENSMUSG00000041268.18_54308809_54322881_1	chr9	-	1440	7	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	85899	35414	85858	-35150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACGGTGCCTTAGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	54322881	54308808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54309271_54311240_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713
ENSMUSG00000041268.18_54309003_54323071_1	chr9	-	1436	7	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	85709	35608	85668	-35344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTGCAAAAAAAGATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	54323071	54309002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54309271_54311240_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713
ENSMUSG00000041268.18_54311258_54323362_1	chr9	-	1442	6	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	85418	37863	85377	-37599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGACGAGCAACAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	54323362	54311257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713
ENSMUSG00000041268.18_54311354_54323465_1	chr9	-	1449	6	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	85315	37959	85274	-37695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACATCCTGACCCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	54323465	54311353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713
ENSMUSG00000041268.18_54311424_54323520_1	chr9	-	1434	6	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	85260	38029	85219	-37765	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACATCTCTATCTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	54323520	54311423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713
ENSMUSG00000041268.18_54313068_54323659_1	chr9	-	1455	5	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	85121	39673	85080	-39409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTAGCTGGTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	54323659	54313067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713
ENSMUSG00000041268.18_54313140_54323711_1	chr9	-	1435	5	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	85069	39745	85028	-39481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCGGAAAGCTGCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	54323711	54313139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713
ENSMUSG00000041268.18_54316540_54323968_1	chr9	-	1431	3	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	84812	43145	84771	-42881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCAGCAATCCAAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	54323968	54316539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54316605_54318883_54318995_54322713
ENSMUSG00000041268.18_54318914_54324136_1	chr9	-	1504	2	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	84644	45519	84603	-45255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATACCGAGTCCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	54324136	54318913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54318995_54322713
ENSMUSG00000041268.18_54322929_54327098_1	chr9	-	1529	2	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	81682	49534	81641	-49270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAGAGAGAGAACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	54327098	54322928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54324388_54327028
ENSMUSG00000041268.18_54323036_54327150_1	chr9	-	1474	2	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	81630	49641	81589	-49377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCCACAGAGCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	54327150	54323035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54324388_54327028
ENSMUSG00000041268.18_54323187_54330560_1	chr9	-	1476	3	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	78220	49792	78179	-49528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGCGGCAGTACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	54330560	54323186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54324388_54327028_54327257_54330513
ENSMUSG00000041268.18_54323372_54333730_1	chr9	-	1429	4	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	75050	49977	75009	-49713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTCTCTCCTACTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	54333730	54323371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54324388_54327028_54327257_54330513_54330634_54333665
ENSMUSG00000041268.18_54323534_54352704_1	chr9	-	1454	6	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	56076	50139	56035	-49875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACGCTGATAGTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	54352704	54323533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54324388_54327028_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666
ENSMUSG00000041268.18_54323582_54352750_1	chr9	-	1452	6	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	56030	50187	55989	-49923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGCATGTATATGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	54352750	54323581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54324388_54327028_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666
ENSMUSG00000041268.18_54324100_54354106_1	chr9	-	1423	7	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	54674	50705	54633	-50441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTATTTCTAAAGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	54354106	54324099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54324388_54327028_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655
ENSMUSG00000041268.18_54324139_54354285_1	chr9	-	1563	7	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	54495	50744	54454	-50480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGCAGTGGCTTACAAG	NA	NA	NA	NA	NA	NA	NA	NA	54354285	54324138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54324388_54327028_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655
ENSMUSG00000041268.18_54324284_54354306_1	chr9	-	1439	7	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	54474	50889	54433	-50625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAACTCACTGGGCAATAC	NA	NA	NA	NA	NA	NA	NA	NA	54354306	54324283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54324388_54327028_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655
ENSMUSG00000041268.18_54327028_54358119_1	chr9	-	1418	7	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	50661	53633	50620	-53369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGTTGTTGAGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	54358119	54327027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080
ENSMUSG00000041268.18_54327070_54358178_1	chr9	-	1435	7	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	50602	53675	50561	-53411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGGAAGCTGTTGAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	54358178	54327069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080
ENSMUSG00000041268.18_54327159_54358299_1	chr9	-	1467	7	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	50481	53764	50440	-53500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCACATTCCTCGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	54358299	54327158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080
ENSMUSG00000041268.18_54330457_54358942_1	chr9	-	1536	7	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	49797	56798	49797	-56798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATGCTTTAGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	54358942	54330456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080_54358353_54358885
ENSMUSG00000041268.18_54335344_54364963_1	chr9	-	1448	6	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	43776	61685	43776	-61685	internal_fragment	TRUE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCTTGATGCCATAACT	NA	NA	NA	NA	NA	NA	NA	NA	54364963	54335343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54335408_54352666_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907
ENSMUSG00000041268.18_54353806_54368249_1	chr9	-	1442	6	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	40490	80147	40490	-80147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGAACTTATTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	54368249	54353805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222
ENSMUSG00000041268.18_54354061_54380215_1	chr9	-	1450	8	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	28524	80402	28524	-80402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTGTGTCCCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	54380215	54354060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171
ENSMUSG00000041268.18_54358079_54387749_1	chr9	-	1532	10	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	20990	84420	20990	-84420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTCCCTGATGAAAACG	NA	NA	NA	NA	NA	NA	NA	NA	54387749	54358078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623
ENSMUSG00000041268.18_54358239_54408780_1	chr9	-	1518	11	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	-41	84580	0	-84580	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGTACTGCTGGACCGG	NA	NA	NA	NA	NA	NA	NA	NA	54408780	54358238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
ENSMUSG00000041278.11_43620836_43632648_1	chr11	-	1018	6	NNC	ENSMUSG00000041278.11	novel	1438	8	NA	NA	-1990	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGGGGACTATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	43632648	43620835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_43621435_43627241_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587
ENSMUSG00000041278.11_43620836_43632651_1	chr11	-	1012	6	NNC	ENSMUSG00000041278.11	novel	1438	8	NA	NA	-1993	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1287	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGGGGACTATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	43632651	43620835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_43621435_43627250_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587
ENSMUSG00000041278.11_43621005_43636097_1	chr11	-	1026	7	NNC	ENSMUSG00000041278.11	novel	1438	8	NA	NA	2712	-157	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGCCACCAAAAACCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	43636097	43621004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_43621435_43627245_43627301_43628698_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911
ENSMUSG00000041278.11_43621107_43636274_1	chr11	-	1110	7	NNC	ENSMUSG00000041278.11	novel	1438	8	NA	NA	2535	-259	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGTGGTGTCTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	43636274	43621106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_43621435_43627241_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911
ENSMUSG00000041278.11_43621107_43636275_2	chr11	-	1102	7	NNC	ENSMUSG00000041278.11	novel	1438	8	NA	NA	2534	-259	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGTGGTGTCTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	43636275	43621106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_43621435_43627250_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911
ENSMUSG00000041278.11_43621107_43636275_5	chr11	-	1106	7	NNC	ENSMUSG00000041278.11	novel	1438	8	NA	NA	2534	-259	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGTGGTGTCTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	43636275	43621106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_43621435_43627241_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632644_43635911
ENSMUSG00000041278.11_43621107_43638809_1	chr11	-	1171	8	NNC	ENSMUSG00000041278.11	novel	1438	8	NA	NA	0	-259	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGTGGTGTCTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	43638809	43621106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_43621435_43627241_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
ENSMUSG00000041287.6_69546140_69547448_1	chr11	+	760	2	FSM	ENSMUSG00000041287.6	ENST00000250055.3	745	2	-15	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1958	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGGGACGCCCAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	69546139	69547448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69546730_69547278
ENSMUSG00000041293.6_43606122_43621684_1	chr17	+	1676	8	ISM	ENSMUSG00000041293.6	ENST00000371253.7	2580	11	118	13125	118	-13125	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGCCACTGTGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	43606121	43621684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_43606152_43607556_43607731_43609895_43609997_43611684_43611744_43614525_43614678_43616122_43616287_43618305_43618495_43620877
ENSMUSG00000041293.6_43607661_43621836_1	chr17	+	1694	7	ISM	ENSMUSG00000041293.6	ENST00000371253.7	2580	11	1657	12973	1657	-12973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGACTACCATGATGG	NA	NA	NA	NA	NA	NA	NA	NA	43607660	43621836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_43607731_43609895_43609997_43611684_43611744_43614525_43614678_43616122_43616287_43618305_43618495_43620877
ENSMUSG00000041293.6_43614625_43622156_1	chr17	+	1685	4	ISM	ENSMUSG00000041293.6	ENST00000371253.7	2580	11	8621	12653	-1517	-12653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGCTCACCTGGGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	43614624	43622156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_43614678_43616122_43616287_43618305_43618495_43620877
ENSMUSG00000041293.6_43616121_43625379_1	chr17	+	1828	5	ISM	ENSMUSG00000041293.6	ENST00000283297.5	1927	6	-21	9430	-21	-9430	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAGACCTTTAACTC	NA	NA	NA	NA	NA	NA	NA	NA	43616120	43625379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_43616287_43618305_43618495_43620877_43622249_43624065_43624108_43625319
ENSMUSG00000041293.6_43616225_43634753_1	chr17	+	1784	6	NIC	ENSMUSG00000041293.6	novel	1927	6	NA	NA	83	-56	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGGAGATTCGTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	43616224	43634753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_+_43616287_43618305_43618495_43620877_43622249_43624065_43624108_43625319_43625380_43634693
ENSMUSG00000041293.6_43616269_43634810_1	chr17	+	1797	6	NIC	ENSMUSG00000041293.6	novel	1927	6	NA	NA	127	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACGAGTCACAAGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	43616268	43634810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_+_43616287_43618305_43618495_43620877_43622249_43624065_43624108_43625319_43625380_43634693
ENSMUSG00000041301.16_18214180_18235232_1	chr6	+	933	7	ISM	ENSMUSG00000041301.16	ENST00000648260.1	2260	14	82	64731	82	-1422	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTCAATTTTCTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	18214179	18235232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_18214315_18220619_18220710_18221468_18221633_18222488_18222615_18225922_18226170_18227925_18228019_18235154
ENSMUSG00000041301.16_18214240_18235279_1	chr6	+	920	7	ISM	ENSMUSG00000041301.16	ENST00000648260.1	2260	14	142	64684	142	-1375	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGGTGTTTCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	18214239	18235279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_18214315_18220619_18220710_18221468_18221633_18222488_18222615_18225922_18226170_18227925_18228019_18235154
ENSMUSG00000041301.16_18214293_18235339_1	chr6	+	927	7	ISM	ENSMUSG00000041301.16	ENST00000648260.1	2260	14	195	64624	195	-1315	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCAGGTAAGCATATTTA	NA	NA	NA	NA	NA	NA	NA	NA	18214292	18235339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_18214315_18220619_18220710_18221468_18221633_18222488_18222615_18225922_18226170_18227925_18228019_18235154
ENSMUSG00000041301.16_18220680_18274595_1	chr6	+	960	8	ISM	ENSMUSG00000041301.16	ENST00000648260.1	2260	14	6582	25368	6582	-25368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTTTCTATTATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	18220679	18274595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_18220710_18221468_18221633_18222488_18222615_18225922_18226170_18227925_18228019_18235154_18235347_18273697_18273736_18274525
ENSMUSG00000041301.16_18221505_18274634_1	chr6	+	933	7	ISM	ENSMUSG00000041301.16	ENST00000648260.1	2260	14	7407	25329	7407	-25329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACACTTTGCTTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	18221504	18274634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_18221633_18222488_18222615_18225922_18226170_18227925_18228019_18235154_18235347_18273697_18273736_18274525
ENSMUSG00000041301.16_18226098_18282477_1	chr6	+	929	8	ISM	ENSMUSG00000041301.16	ENST00000648260.1	2260	14	12000	17486	12000	-17486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCGAGCCTTCCGACGCC	NA	NA	NA	NA	NA	NA	NA	NA	18226097	18282477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_18226170_18227925_18228019_18235154_18235347_18273697_18273736_18274525_18274777_18277806_18277887_18280254_18280406_18282425
ENSMUSG00000041301.16_18226149_18282544_1	chr6	+	945	8	ISM	ENSMUSG00000041301.16	ENST00000648260.1	2260	14	12051	17419	12051	-17419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACTGGTTTATGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	18226148	18282544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_18226170_18227925_18228019_18235154_18235347_18273697_18273736_18274525_18274777_18277806_18277887_18280254_18280406_18282425
ENSMUSG00000041301.16_18235269_18299721_1	chr6	+	967	8	ISM	ENSMUSG00000041301.16	ENST00000648260.1	2260	14	21171	242	21171	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGAAGAAAGTATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	18235268	18299721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_18235347_18273697_18273736_18274525_18274777_18277806_18277887_18280254_18280406_18282425_18282654_18285545_18285647_18299681
ENSMUSG00000041301.16_18274612_18299873_1	chr6	+	917	6	ISM	ENSMUSG00000041301.16	ENST00000648260.1	2260	14	60514	90	60514	-90	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGATGATGGAAATGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	18274611	18299873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_18274777_18277806_18277887_18280254_18280406_18282425_18282654_18285545_18285647_18299681
ENSMUSG00000041301.16_18274675_18299933_1	chr6	+	914	6	ISM	ENSMUSG00000041301.16	ENST00000648260.1	2260	14	60577	30	60577	-30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGATTTCAGCATTACTT	NA	NA	NA	NA	NA	NA	NA	NA	18274674	18299933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_18274777_18277806_18277887_18280254_18280406_18282425_18282654_18285545_18285647_18299681
ENSMUSG00000041303.8_54436003_54445127_1	chr1	-	1760	5	ISM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	33003	840	33003	-840	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTTTTGTGGATAACGT	NA	NA	NA	NA	NA	NA	NA	NA	54445127	54436002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995
ENSMUSG00000041303.8_54442731_54468070_1	chr1	-	1747	12	ISM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	10060	7568	10060	-7568	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTATTCACATGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	54468070	54442730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920
ENSMUSG00000041324.15_16186783_16201973_1	chr13	+	1919	4	ISM	ENSMUSG00000041324.15	ENSMUST00000042603.14	6390	5	347	4233	347	177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGGGGGGAGGGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	16186782	16201973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_16186972_16189035_16189118_16191766_16192269_16200827
ENSMUSG00000041324.15_16186816_16202045_1	chr13	+	1958	4	ISM	ENSMUSG00000041324.15	ENSMUST00000042603.14	6390	5	380	4161	380	249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATCCAAACTGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	16186815	16202045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_16186972_16189035_16189118_16191766_16192269_16200827
ENSMUSG00000041324.15_16186855_16202128_1	chr13	+	2002	4	ISM	ENSMUSG00000041324.15	ENSMUST00000042603.14	6390	5	419	4078	419	332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGTGGGTTAGCACAAC	NA	NA	NA	NA	NA	NA	NA	NA	16186854	16202128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_16186972_16189035_16189118_16191766_16192269_16200827
ENSMUSG00000041324.15_16192162_16202640_1	chr13	+	1920	2	ISM	ENSMUSG00000041324.15	ENSMUST00000164993.2	1529	3	3102	-844	3102	844	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACTGTTTACCTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	16192161	16202640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_16192269_16200827
ENSMUSG00000041343.20_92233661_92285741_1	chr7	-	1895	12	NNC	ENSMUSG00000041343.20	novel	1900	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1548	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAAGGTTAAATACATCC	NA	NA	NA	NA	NA	NA	NA	NA	92285741	92233660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_92233754_92239322_92239468_92241038_92241166_92254415_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273183_92273296_92274978_92275087_92280706_92280871_92285337
ENSMUSG00000041343.20_92233661_92285741_2	chr7	-	1894	12	NNC	ENSMUSG00000041343.20	novel	1900	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAAGGTTAAATACATCC	NA	NA	NA	NA	NA	NA	NA	NA	92285741	92233660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_92233754_92239322_92239468_92241038_92241160_92254415_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273178_92273296_92274978_92275087_92280706_92280871_92285337
ENSMUSG00000041343.20_92233661_92285741_3	chr7	-	1895	12	NNC	ENSMUSG00000041343.20	novel	1900	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAAGGTTAAATACATCC	NA	NA	NA	NA	NA	NA	NA	NA	92285741	92233660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_92233754_92239322_92239468_92241038_92241166_92254415_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268884_92273175_92273296_92274978_92275087_92280706_92280871_92285337
ENSMUSG00000041343.20_92233661_92285741_4	chr7	-	1894	12	NNC	ENSMUSG00000041343.20	novel	1900	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAAGGTTAAATACATCC	NA	NA	NA	NA	NA	NA	NA	NA	92285741	92233660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_92233754_92239322_92239468_92241038_92241166_92254415_92254589_92259752_92259859_92261950_92262071_92263559_92263761_92268755_92268892_92273178_92273296_92274978_92275087_92280706_92280871_92285337
ENSMUSG00000041343.20_92233661_92285741_5	chr7	-	1900	12	NNC	ENSMUSG00000041343.20	novel	1900	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAAGGTTAAATACATCC	NA	NA	NA	NA	NA	NA	NA	NA	92285741	92233660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_92233754_92239322_92239468_92241038_92241166_92254415_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273175_92273296_92274978_92275087_92280706_92280864_92285333
ENSMUSG00000041343.20_92233661_92285741_6	chr7	-	1903	12	FSM	ENSMUSG00000041343.20	ENSMUST00000118157.8	2782	12	609	270	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAAGGTTAAATACATCC	NA	NA	NA	NA	NA	NA	NA	NA	92285741	92233660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_92233754_92239322_92239468_92241038_92241166_92254415_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273175_92273296_92274978_92275087_92280706_92280871_92285337
ENSMUSG00000041346.12_69452585_69454463_1	chr11	-	936	6	ISM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	15687	0	15687	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTCATTGTGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	69454463	69452584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372
ENSMUSG00000041346.12_69452585_69469880_1	chr11	-	1621	10	FSM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	270	0	270	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTCATTGTGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	69469880	69452584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
ENSMUSG00000041346.12_69452735_69469976_1	chr11	-	1567	10	FSM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	174	150	174	-136	multi-exon	FALSE	canonical	NA	NA	NA	NA	2221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCCACGCCCATCCCG	NA	NA	NA	NA	NA	NA	NA	NA	69469976	69452734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
ENSMUSG00000041346.12_69452948_69470150_1	chr11	-	1630	9	ISM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	0	363	0	-349	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTCATTCCCTGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	69470150	69452947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
ENSMUSG00000041346.12_69454231_69472343_1	chr11	-	877	7	ISM	ENSMUSG00000041346.12	ENST00000431639.6	1761	11	85	1632	85	-1632	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCGGATGGTTCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	69472343	69454230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495_69469880_69472273
ENSMUSG00000041346.12_69469529_69471182_1	chr11	-	416	2	ISM	ENSMUSG00000041346.12	ENST00000457584.6	1717	11	46	16930	46	-16930	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAACGCGCTGAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	69471182	69469528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69469880_69471117
ENSMUSG00000041351.17_137392065_137455007_1	chr4	+	2268	22	ISM	ENSMUSG00000041351.17	ENST00000290101.8	3515	24	34	2168	34	-1399	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCCCATAAGCGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	137392064	137455007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137392160_137431366_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451304_137452002_137452113_137452860_137452975_137454262_137454387_137454987
ENSMUSG00000041351.17_137431429_137455669_1	chr4	+	2293	22	ISM	ENSMUSG00000041351.17	ENST00000290101.8	3515	24	39398	1506	-3404	-737	internal_fragment	TRUE	canonical	NA	NA	NA	NA	1602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGTACACGGGGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	137431428	137455669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451304_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570
ENSMUSG00000041351.17_137437922_137456636_1	chr4	+	2510	21	FSM	ENSMUSG00000041351.17	ENST00000542643.6	3045	21	0	535	0	230	multi-exon	FALSE	canonical	NA	NA	NA	NA	2252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGAGTATTTCAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	137437921	137456636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451135_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455594_137455711_137456185
ENSMUSG00000041351.17_137438957_137456247_1	chr4	+	2264	20	ISM	ENSMUSG00000041351.17	ENST00000374763.6	3239	21	1035	925	1035	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCACCCCAGCCCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	137438956	137456247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451304_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041351.17_137439432_137455090_1	chr4	+	1668	16	ISM	ENSMUSG00000041351.17	ENST00000374765.9	2992	20	1510	2082	1510	-1316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCAGGCTAGCAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	137439431	137455090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987
ENSMUSG00000041351.17_137443051_137456390_1	chr4	+	2182	18	ISM	ENSMUSG00000041351.17	ENST00000374763.6	3239	21	5129	782	5129	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGGGCAGGGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	137443050	137456390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451304_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041351.17_137443089_137456849_1	chr4	+	2410	18	ISM	ENSMUSG00000041351.17	ENST00000542643.6	3045	21	5167	322	5167	-322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCTTGGTTGTGGATAG	NA	NA	NA	NA	NA	NA	NA	NA	137443088	137456849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451135_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455594_137455711_137456185
ENSMUSG00000041351.17_137443090_137456452_1	chr4	+	2205	18	ISM	ENSMUSG00000041351.17	ENST00000374763.6	3239	21	5168	720	5168	46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCTGGAGCCACGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	137443089	137456452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451304_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041351.17_137443138_137456508_1	chr4	+	2213	18	ISM	ENSMUSG00000041351.17	ENST00000374763.6	3239	21	5216	664	5216	102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCCCACCGCAGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	137443137	137456508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451304_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041351.17_137443394_137456247_1	chr4	+	1688	16	ISM	ENSMUSG00000041351.17	ENST00000374765.9	2992	20	5472	925	5472	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCACCCCAGCCCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	137443393	137456247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041351.17_137443394_137456636_1	chr4	+	2324	17	ISM	ENSMUSG00000041351.17	ENST00000374763.6	3239	21	5472	536	5472	230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGAGTATTTCAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	137443393	137456636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451304_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041351.17_137443394_137457013_1	chr4	+	2508	17	ISM	ENSMUSG00000041351.17	ENST00000542643.6	3045	21	5472	158	5472	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAGCTGCTGTGAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	137443393	137457013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451135_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455594_137455711_137456185
ENSMUSG00000041351.17_137445000_137456382_1	chr4	+	1609	13	ISM	ENSMUSG00000041351.17	ENST00000374765.9	2992	20	7078	790	7078	-24	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCTCTGGGTGTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	137444999	137456382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041351.17_137445001_137457172_1	chr4	+	2452	14	ISM	ENSMUSG00000041351.17	ENST00000542643.6	3045	21	7079	-1	7079	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	137445000	137457172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451135_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455594_137455711_137456185
ENSMUSG00000041351.17_137445038_137456446_1	chr4	+	1635	13	ISM	ENSMUSG00000041351.17	ENST00000374765.9	2992	20	7116	726	7116	40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCCCCTCTGGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	137445037	137456446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041351.17_137445089_137456496_1	chr4	+	1634	13	ISM	ENSMUSG00000041351.17	ENST00000374765.9	2992	20	7167	676	7167	90	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCGTGCGCATACAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	137445088	137456496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041351.17_137445259_137456883_1	chr4	+	2218	13	ISM	ENSMUSG00000041351.17	ENST00000374763.6	3239	21	7337	289	7337	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACCCAGCACCCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	137445258	137456883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451304_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041351.17_137446183_137457013_1	chr4	+	2254	12	ISM	ENSMUSG00000041351.17	ENST00000374763.6	3239	21	8261	159	8261	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAGCTGCTGTGAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	137446182	137457013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451304_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041351.17_137446637_137457172_1	chr4	+	2256	11	ISM	ENSMUSG00000041351.17	ENST00000374763.6	3239	21	8715	0	8715	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	137446636	137457172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451304_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041351.17_137447243_137456898_1	chr4	+	1639	9	ISM	ENSMUSG00000041351.17	ENST00000374765.9	2992	20	9321	274	9321	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTAACCCTGCCACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	137447242	137456898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041351.17_137447603_137457013_1	chr4	+	1691	8	ISM	ENSMUSG00000041351.17	ENST00000374765.9	2992	20	9681	159	9681	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAGCTGCTGTGAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	137447602	137457013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041351.17_137449135_137457172_1	chr4	+	1712	7	ISM	ENSMUSG00000041351.17	ENST00000374765.9	2992	20	11213	0	11213	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	137449134	137457172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041354.17_34148878_34151746_1	chr17	+	971	6	ISM	ENSMUSG00000041354.17	ENSMUST00000047503.16	3252	18	322	4915	322	-4915	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACACTCTCTGCCCCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	34148877	34151746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427
ENSMUSG00000041354.17_34151471_34154212_1	chr17	+	978	8	ISM	ENSMUSG00000041354.17	ENSMUST00000047503.16	3252	18	2915	2449	2915	-2449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGAAGCTCAGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	34151470	34154212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107
ENSMUSG00000041354.17_34154362_34156432_1	chr17	+	983	5	ISM	ENSMUSG00000041354.17	ENSMUST00000047503.16	3252	18	5806	229	5806	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAACCATGTTGGATACCT	NA	NA	NA	NA	NA	NA	NA	NA	34154361	34156432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ENSMUSG00000041354.17_34154755_34156661_1	chr17	+	991	3	ISM	ENSMUSG00000041354.17	ENSMUST00000047503.16	3252	18	6199	0	6199	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	34154754	34156661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34155008_34155836_34155952_34156038
ENSMUSG00000041355.14_88487186_88495726_2	chr3	+	981	5	FSM	ENSMUSG00000041355.14	ENSMUST00000035785.9	1189	5	208	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTCTTGCGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	88487185	88495726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ENSMUSG00000041355.14_88487255_88488379_1	chr3	+	186	2	ISM	ENSMUSG00000041355.14	ENSMUST00000192495.6	620	6	281	6961	74	-6947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCTTTTTTTTAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	88487254	88488379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88487342_88488280
ENSMUSG00000041355.14_88487255_88495727_1	chr3	+	913	5	FSM	ENSMUSG00000041355.14	ENSMUST00000035785.9	1189	5	277	-1	74	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCTTGCGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	88487254	88495727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ENSMUSG00000041358.2_112080075_112080991_1	chr2	-	538	2	ISM	ENSMUSG00000041358.2	ENSMUST00000043970.2	3731	7	8645	1782	8645	-1553	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGGTTTTACCTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	112080991	112080074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_112080525_112080903
ENSMUSG00000041358.2_112080200_112081451_1	chr2	-	504	3	ISM	ENSMUSG00000041358.2	ENSMUST00000043970.2	3731	7	8185	1907	8185	-1678	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTACTCTTGGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	112081451	112080199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_112080525_112080903_112081021_112081389
ENSMUSG00000041358.2_112080345_112081601_1	chr2	-	509	3	ISM	ENSMUSG00000041358.2	ENSMUST00000043970.2	3731	7	8035	2052	8035	-1823	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTCCAGGCAAGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	112081601	112080344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_112080525_112080903_112081021_112081389
ENSMUSG00000041358.2_112080454_112082130_1	chr2	-	516	4	ISM	ENSMUSG00000041358.2	ENSMUST00000043970.2	3731	7	7506	2161	7506	-1932	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGACTCAAGTCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	112082130	112080453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_112080525_112080903_112081021_112081389_112081668_112082080
ENSMUSG00000041358.2_112080963_112083903_1	chr2	-	533	4	ISM	ENSMUSG00000041358.2	ENSMUST00000043970.2	3731	7	5733	2670	5733	-2441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATCCTTTGTCTTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	112083903	112080962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_112081021_112081389_112081668_112082080_112082221_112083846
ENSMUSG00000041358.2_112081427_112086028_1	chr2	-	534	4	ISM	ENSMUSG00000041358.2	ENSMUST00000043970.2	3731	7	3608	3134	3608	-2905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAACTCTGTTCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	112086028	112081426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_112081668_112082080_112082221_112083846_112083976_112086004
ENSMUSG00000041358.2_112081605_112086181_1	chr2	-	509	4	ISM	ENSMUSG00000041358.2	ENSMUST00000043970.2	3731	7	3455	3312	3455	-3083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCCTCCTGTTCCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	112086181	112081604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_112081668_112082080_112082221_112083846_112083976_112086004
ENSMUSG00000041358.2_112082191_112086359_1	chr2	-	514	3	ISM	ENSMUSG00000041358.2	ENSMUST00000043970.2	3731	7	3277	3898	3277	-3669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATACAGAATGCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	112086359	112082190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_112082221_112083846_112083976_112086004
ENSMUSG00000041358.2_112083935_112086478_1	chr2	-	515	2	ISM	ENSMUSG00000041358.2	ENSMUST00000043970.2	3731	7	3158	5642	3158	-5413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGAGGAGGGACTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	112086478	112083934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_112083976_112086004
ENSMUSG00000041358.2_112086291_112089636_1	chr2	-	549	2	ISM	ENSMUSG00000041358.2	ENSMUST00000043970.2	3731	7	0	7998	0	-7769	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGTTGGAGTGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	112089636	112086290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_112086714_112089510
ENSMUSG00000041358.2_112086356_112089682_1	chr2	-	530	2	ISM	ENSMUSG00000041358.2	ENSMUST00000043970.2	3731	7	-46	8063	-46	-7834	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGAGGGGCCTCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	112089682	112086355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_112086714_112089510
ENSMUSG00000041358.2_112086476_112091805_1	chr2	-	508	3	ISM	ENSMUSG00000041358.2	ENST00000614490.4	3926	8	280	7954	280	-7954	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAGGTCATTGTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	112091805	112086475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_112086714_112089510_112089689_112091713
ENSMUSG00000041358.2_112086541_112091874_1	chr2	-	512	3	ISM	ENSMUSG00000041358.2	ENST00000614490.4	3926	8	211	8019	211	-8019	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTTCCCCAGCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	112091874	112086540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_112086714_112089510_112089689_112091713
ENSMUSG00000041358.2_112086600_112091931_1	chr2	-	510	3	ISM	ENSMUSG00000041358.2	ENST00000614490.4	3926	8	154	8078	154	-8078	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATCACCACAGCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	112091931	112086599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_112086714_112089510_112089689_112091713
ENSMUSG00000041360.9_27366098_27371730_1	chr19	-	1709	2	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	35495	0	35495	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTTGTTTGTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	27371730	27366097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_27367714_27371637
ENSMUSG00000041360.9_27366344_27376346_1	chr19	-	1614	4	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	30879	246	30879	-246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGGTGAATTTCTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	27376346	27366343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281
ENSMUSG00000041360.9_27366551_27377131_1	chr19	-	1618	5	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	30094	453	30094	-453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGGCTAACATACCATG	NA	NA	NA	NA	NA	NA	NA	NA	27377131	27366550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078
ENSMUSG00000041360.9_27366786_27394152_1	chr19	-	1626	8	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	13073	688	13073	-688	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCATGTCTGATATAT	NA	NA	NA	NA	NA	NA	NA	NA	27394152	27366785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134
ENSMUSG00000041360.9_27366942_27397499_1	chr19	-	1712	10	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	9726	844	9726	-844	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTGTGACTAAAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	27397499	27366941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417
ENSMUSG00000041360.9_27367016_27397499_1	chr19	-	1638	10	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	9726	918	9726	-918	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTTCAGGGTAAATACCT	NA	NA	NA	NA	NA	NA	NA	NA	27397499	27367015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417
ENSMUSG00000041360.9_27367164_27398883_1	chr19	-	1699	11	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	8342	1066	8342	-1066	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCGTGCAGACTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	27398883	27367163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696
ENSMUSG00000041360.9_27367276_27399821_1	chr19	-	1642	12	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	7404	1178	7404	-1178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAAGGACATGAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	27399821	27367275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754
ENSMUSG00000041360.9_27367461_27400981_1	chr19	-	1627	14	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	6244	1363	6244	-1363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	27400981	27367460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905
ENSMUSG00000041360.9_27367650_27403267_1	chr19	-	1646	16	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	3958	1552	3958	-1552	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTACCTTGGAAAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	27403267	27367649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195
ENSMUSG00000041360.9_27371638_27403414_1	chr19	-	1729	15	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	3811	5540	3811	-5540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTAGCTGTGTCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	27403414	27371637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195
ENSMUSG00000041360.9_27373695_27404528_1	chr19	-	1730	15	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	2697	7597	2697	-7597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCTGTGCAGCTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	27404528	27373694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436
ENSMUSG00000041362.18_58977259_59026824_1	chr19	-	1629	13	NNC	ENSMUSG00000041362.18	novel	1914	17	NA	NA	37677	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1320	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGTTCAATGACTGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	59026824	58977258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_58977483_58978620_58978814_58983452_58983571_58988324_58988379_58992271_58992382_58998196_58998280_59003958_59004059_59007236_59007391_59010607_59010755_59016586_59016682_59020604_59020687_59023475_59023574_59026653
ENSMUSG00000041362.18_58977259_59030388_3	chr19	-	1725	14	ISM	ENSMUSG00000041362.18	ENST00000392901.10	1914	17	56215	0	34113	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1652	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGTTCAATGACTGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	59030388	58977258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_58977483_58978620_58978814_58983449_58983571_58988324_58988379_58992271_58992382_58998196_58998280_59003958_59004059_59007236_59007391_59010607_59010755_59016586_59016682_59020604_59020687_59023475_59023574_59026653_59026823_59030293
ENSMUSG00000041362.18_58978651_59086572_1	chr19	-	1629	16	ISM	ENSMUSG00000041362.18	ENST00000392901.10	1914	17	31	1392	31	-1392	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	903	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGCACGAATCCCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	59086572	58978650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_58978814_58983449_58983571_58988324_58988379_58992271_58992382_58998196_58998280_59003958_59004059_59007236_59007391_59010607_59010755_59016586_59016682_59020604_59020687_59023475_59023574_59026653_59026823_59030293_59030389_59039265_59039327_59049062_59049116_59086528
ENSMUSG00000041380.14_145745626_145858902_1	chrX	+	782	4	ISM	ENSMUSG00000041380.14	ENSMUST00000112831.3	809	6	-393	107246	116	-107246	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATTCTCGTTATCATG	NA	NA	NA	NA	NA	NA	NA	NA	145745625	145858902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_145746071_145764543_145764602_145855380_145855484_145858726
ENSMUSG00000041380.14_145745626_145978708_1	chrX	+	3068	6	FSM	ENSMUSG00000041380.14	ENSMUST00000036303.9	4747	6	117	1562	116	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAATTTAAAAAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	145745625	145978708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_145746071_145764543_145764602_145855380_145855484_145858726_145859044_145952565_145952767_145976764
ENSMUSG00000041380.14_145745626_145978784_1	chrX	+	3144	6	FSM	ENSMUSG00000041380.14	ENSMUST00000036303.9	4747	6	117	1486	116	74	multi-exon	FALSE	canonical	NA	NA	NA	NA	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATCTCATTTTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	145745625	145978784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_145746071_145764543_145764602_145855380_145855484_145858726_145859044_145952565_145952767_145976764
ENSMUSG00000041380.14_145745730_145977180_1	chrX	+	1533	6	FSM	ENSMUSG00000041380.14	ENST00000371951.5	3283	6	220	1530	220	-1530	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTGCCCGTTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	145745729	145977180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_145746071_145764543_145764699_145855380_145855484_145858726_145859044_145952565_145952767_145976764
ENSMUSG00000041380.14_145746019_145976844_1	chrX	+	716	6	FSM	ENSMUSG00000041380.14	ENSMUST00000156697.8	4654	6	509	3429	0	-1866	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCGAACTTCGTTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	145746018	145976844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_145746071_145764543_145764602_145855380_145855484_145858726_145859044_145952565_145952672_145976764
ENSMUSG00000041380.14_145746019_145977355_1	chrX	+	1419	6	FSM	ENSMUSG00000041380.14	ENST00000371951.5	3283	6	509	1355	0	-1355	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGCGCTGCGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	145746018	145977355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_145746071_145764543_145764699_145855380_145855484_145858726_145859044_145952565_145952767_145976764
ENSMUSG00000041380.14_145746019_145979072_1	chrX	+	3039	6	FSM	ENSMUSG00000041380.14	ENSMUST00000036303.9	4747	6	510	1198	0	362	multi-exon	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCAGTAACTGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	145746018	145979072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_145746071_145764543_145764602_145855380_145855484_145858726_145859044_145952565_145952767_145976764
ENSMUSG00000041380.14_145764592_145977497_1	chrX	+	1461	5	ISM	ENSMUSG00000041380.14	ENST00000371951.5	3283	6	19082	1213	18573	-1213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACAGAGCCTGGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	145764591	145977497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_145764699_145855380_145855484_145858726_145859044_145952565_145952767_145976764
ENSMUSG00000041380.14_145855400_145977004_1	chrX	+	747	4	ISM	ENSMUSG00000041380.14	ENST00000371950.3	4652	6	109890	3263	109381	-1706	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAAGTGCTGCTGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	145855399	145977004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_145855484_145858726_145859044_145952565_145952672_145976764
ENSMUSG00000041380.14_145855404_145979281_1	chrX	+	3115	4	ISM	ENSMUSG00000041380.14	ENST00000371951.5	3283	6	109894	-571	109385	571	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCAAGGAGGCAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	145855403	145979281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_145855484_145858726_145859044_145952565_145952767_145976764
ENSMUSG00000041380.14_145855466_145977040_1	chrX	+	717	4	ISM	ENSMUSG00000041380.14	ENST00000371950.3	4652	6	109956	3227	109447	-1670	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACGCTCCCAACCCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	145855465	145977040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_145855484_145858726_145859044_145952565_145952672_145976764
ENSMUSG00000041380.14_145858827_145979431_1	chrX	+	3085	3	ISM	ENSMUSG00000041380.14	ENST00000371951.5	3283	6	113317	-721	112808	721	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGCATGTTAAAACAATT	NA	NA	NA	NA	NA	NA	NA	NA	145858826	145979431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_145859044_145952565_145952767_145976764
ENSMUSG00000041380.14_145858871_145979490_1	chrX	+	3100	3	ISM	ENSMUSG00000041380.14	ENST00000276198.6	4747	6	113361	777	112852	-777	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATGACTGAAGAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	145858870	145979490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_145859044_145952565_145952767_145976764
ENSMUSG00000041380.14_145858948_145979551_1	chrX	+	3084	3	ISM	ENSMUSG00000041380.14	ENST00000276198.6	4747	6	113438	716	112929	-716	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATGTAACACCATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	145858947	145979551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_145859044_145952565_145952767_145976764
ENSMUSG00000041380.14_145952558_145977355_1	chrX	+	705	2	ISM	ENSMUSG00000041380.14	ENST00000371950.3	4652	6	207048	2912	206539	-1355	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGCGCTGCGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	145952557	145977355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_145952672_145976764
ENSMUSG00000041380.14_145952598_145979669_1	chrX	+	3074	2	ISM	ENSMUSG00000041380.14	ENST00000276198.6	4747	6	207088	598	206579	-598	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAAGTATTGTATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	145952597	145979669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_145952767_145976764
ENSMUSG00000041380.14_145952684_145979763_1	chrX	+	3082	2	ISM	ENSMUSG00000041380.14	ENST00000276198.6	4747	6	207174	504	206665	-504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAACCATGCAGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	145952683	145979763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_145952767_145976764
ENSMUSG00000041406.15_163813617_163815279_1	chr1	-	366	3	ISM	ENSMUSG00000041406.15	ENSMUST00000045876.8	3179	24	7086	32294	7086	-32294	internal_fragment	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCTTCAGTAGATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	163815279	163813616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_163813737_163814455_163814597_163815174
ENSMUSG00000041415.11_104669232_104670418_1	chr12	-	304	2	ISM	ENSMUSG00000041415.11	ENST00000532939.3	5501	25	47795	6708	47793	-6708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGCTAAGCTCCAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	104670418	104669231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_104669442_104670324
ENSMUSG00000041415.11_104696482_104698149_1	chr12	-	295	3	ISM	ENSMUSG00000041415.11	ENST00000532939.3	5501	25	20064	33958	20062	-33958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGATCTCAAGGTTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	104698149	104696481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_104696523_104697278_104697442_104698058
ENSMUSG00000041420.19_15909355_15920294_1	chr7	+	1596	13	FSM	ENSMUSG00000041420.19	ENSMUST00000002495.18	1731	13	0	135	0	-135	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCAAGGAAGAAGGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	15909354	15920294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_15909493_15911316_15911499_15911633_15911794_15911885_15911937_15912669_15912721_15912875_15913026_15915965_15916078_15916244_15916394_15917715_15917793_15917962_15918022_15918559_15918644_15919372_15919443_15919981
ENSMUSG00000041420.19_15909455_15920429_1	chr7	+	1631	13	FSM	ENSMUSG00000041420.19	ENSMUST00000002495.18	1731	13	100	0	100	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATTCTCATTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	15909454	15920429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_15909493_15911316_15911499_15911633_15911794_15911885_15911937_15912669_15912721_15912875_15913026_15915965_15916078_15916244_15916394_15917715_15917793_15917962_15918022_15918559_15918644_15919372_15919443_15919981
ENSMUSG00000041426.13_52899251_52904760_1	chr1	+	212	3	ISM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	15046	55385	15046	-55380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAATACATCTTGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	52899250	52904760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_52899325_52901426_52901512_52904707
ENSMUSG00000041426.13_52924298_52942029_1	chr1	+	213	3	ISM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	40093	18116	40093	-18111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTTAAAGTCACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	52924297	52942029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_52924341_52940346_52940493_52942005
ENSMUSG00000041426.13_52940451_52944577_1	chr1	+	236	4	ISM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	56246	15568	56246	-15563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGTCACCTTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	52940450	52944577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_52940493_52942005_52942093_52943800_52943860_52944529
ENSMUSG00000041426.13_52944526_52955829_1	chr1	+	240	3	ISM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	60321	4316	60321	-4311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGACAGGTGTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	52944525	52955829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_52944612_52952889_52953010_52955795
ENSMUSG00000041426.13_52952908_52959498_1	chr1	+	213	3	ISM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	68703	647	68703	-642	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTAAATCTCTGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	52952907	52959498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_52953010_52955795_52955830_52959421
ENSMUSG00000041431.17_100915255_100922356_1	chr13	-	2148	8	ISM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	722	97	554	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTTCACAATTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	100922356	100915254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240
ENSMUSG00000041431.17_100915413_100922937_1	chr13	-	2093	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	141	255	-27	-173	multi-exon	FALSE	canonical	NA	NA	NA	NA	1965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGGTGTGCTTTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	100922937	100915412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ENSMUSG00000041431.17_100915466_100922997_1	chr13	-	2100	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	81	308	-3	-226	multi-exon	FALSE	canonical	NA	NA	NA	NA	1571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTCTTAAATGATGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100922997	100915465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ENSMUSG00000041431.17_100915466_100923034_1	chr13	-	2137	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	44	308	-40	-226	multi-exon	FALSE	canonical	NA	NA	NA	NA	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTCTTAAATGATGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100923034	100915465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ENSMUSG00000041431.17_100915467_100922994_1	chr13	-	2091	9	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	0	-227	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTCTTAAATGATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	100922994	100915466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917898_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ENSMUSG00000041431.17_100915526_100923078_1	chr13	-	2121	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	0	368	0	-286	multi-exon	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTAACATAGTCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	100923078	100915525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ENSMUSG00000041438.9_107620268_107638980_1	chr8	+	1366	11	ISM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	-15	10740	-15	-10740	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGAGGGGGGCGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	107620267	107638980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857
ENSMUSG00000041438.9_107621221_107640136_1	chr8	+	1448	11	ISM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	938	9584	938	-9584	internal_fragment	TRUE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGATTCTTTTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	107621220	107640136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979
ENSMUSG00000041438.9_107624729_107644229_1	chr8	+	1371	12	ISM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	4446	5491	4446	-5491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTACAACTTCCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	107624728	107644229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213
ENSMUSG00000041438.9_107624864_107645283_1	chr8	+	1348	13	ISM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	4581	4437	4581	-4437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGTGGAGCCGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	107624863	107645283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251
ENSMUSG00000041438.9_107630949_107649517_1	chr8	+	1355	12	ISM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	10666	203	10666	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGATGAAAGGACACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	107630948	107649517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ENSMUSG00000041438.9_107631007_107649563_1	chr8	+	1343	12	ISM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	10724	157	10724	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGCTCAACTCCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	107631006	107649563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ENSMUSG00000041438.9_107631051_107649719_1	chr8	+	1455	12	ISM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	10768	1	10768	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	107631050	107649719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ENSMUSG00000041453.13_146769700_146773079_1	chr5	+	1093	6	FSM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	0	763	0	283	multi-exon	FALSE	canonical	NA	NA	NA	NA	2034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAGCATGCTGGTATTAG	NA	NA	NA	NA	NA	NA	NA	NA	146769699	146773079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ENSMUSG00000041453.13_146769700_146773186_1	chr5	+	1200	6	FSM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	0	656	0	390	multi-exon	FALSE	canonical	NA	NA	NA	NA	3537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGTACTGCTTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	146769699	146773186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ENSMUSG00000041453.13_146770994_146773320_1	chr5	+	1052	5	ISM	ENSMUSG00000041453.13	ENSMUST00000099272.3	1067	6	982	-524	982	-522	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGCATTTAACCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	146770993	146773320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ENSMUSG00000041453.13_146770994_146773435_1	chr5	+	1167	5	ISM	ENSMUSG00000041453.13	ENSMUST00000099272.3	1067	6	982	-639	982	-407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACAAGCAAATAACTATAT	NA	NA	NA	NA	NA	NA	NA	NA	146770993	146773435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ENSMUSG00000041453.13_146772374_146773640_1	chr5	+	1118	2	ISM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	2674	202	2362	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCGCAGCTCATTAAC	NA	NA	NA	NA	NA	NA	NA	NA	146772373	146773640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_146772525_146772673
ENSMUSG00000041459.16_148701908_148703814_1	chr4	-	1515	2	ISM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	7662	5069	6005	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGATGGTGGTGCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	148703814	148701907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148703249_148703640
ENSMUSG00000041459.16_148702011_148706447_1	chr4	-	449	4	ISM	ENSMUSG00000041459.16	ENST00000456601.1	803	5	3376	-10	3372	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATCCGCTACTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	148706447	148702010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148702093_148703094_148703249_148703640_148703812_148706405
ENSMUSG00000041459.16_148703178_148709639_1	chr4	-	464	4	ISM	ENSMUSG00000041459.16	ENST00000456601.1	803	5	184	1157	180	-1157	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGCATAATAGCAATAGAC	NA	NA	NA	NA	NA	NA	NA	NA	148709639	148703177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148703249_148703640_148703812_148706405_148706570_148709581
ENSMUSG00000041471.10_33958990_33971279_1	chr14	-	1387	6	ISM	ENSMUSG00000041471.10	ENSMUST00000111917.3	3317	11	61044	0	19583	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	33971279	33958989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133
ENSMUSG00000041471.10_33959447_33989792_1	chr14	-	1422	8	ISM	ENSMUSG00000041471.10	ENSMUST00000111917.3	3317	11	42531	457	1070	-457	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTCGAGTTGGATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	33989792	33959446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457
ENSMUSG00000041471.10_33960795_33989916_1	chr14	-	1242	6	FSM	ENSMUSG00000041471.10	ENST00000554755.1	2188	6	946	0	946	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAACAGCAACACCATCC	NA	NA	NA	NA	NA	NA	NA	NA	33989916	33960794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_33960911_33963243_33963473_33970840_33970976_33971133_33971329_33981581_33981690_33989457
ENSMUSG00000041471.10_33963261_33990055_1	chr14	-	1455	6	ISM	ENSMUSG00000041471.10	ENSMUST00000111917.3	3317	11	42268	4271	807	-2466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATATTCTATAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	33990055	33963260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457
ENSMUSG00000041471.10_33963261_33990220_1	chr14	-	1413	5	ISM	ENSMUSG00000041471.10	ENST00000554755.1	2188	6	642	2466	642	-2466	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATATTCTATAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	33990220	33963260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_33963473_33970840_33970976_33971133_33971329_33981581_33981690_33989457
ENSMUSG00000041471.10_33970879_33990394_1	chr14	-	1337	4	ISM	ENSMUSG00000041471.10	ENST00000554755.1	2188	6	468	10084	468	-10084	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCAGCCTGGTATACTC	NA	NA	NA	NA	NA	NA	NA	NA	33990394	33970878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_33970976_33971133_33971329_33981581_33981690_33989457
ENSMUSG00000041471.10_33971166_33990538_1	chr14	-	1352	3	ISM	ENSMUSG00000041471.10	ENST00000554755.1	2188	6	324	10371	324	-10371	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGAGTAGTGGATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	33990538	33971165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_33971329_33981581_33981690_33989457
ENSMUSG00000041471.10_33971239_33990595_1	chr14	-	1336	3	ISM	ENSMUSG00000041471.10	ENST00000554755.1	2188	6	267	10444	267	-10444	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCTCAGAAAATGAACACT	NA	NA	NA	NA	NA	NA	NA	NA	33990595	33971238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_33971329_33981581_33981690_33989457
ENSMUSG00000041471.10_33971256_33990682_1	chr14	-	1406	3	ISM	ENSMUSG00000041471.10	ENST00000554755.1	2188	6	180	10461	180	-10461	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGCCTCAGAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	33990682	33971255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_33971329_33981581_33981690_33989457
ENSMUSG00000041476.13_156497581_156535587_1	chrX	+	642	3	ISM	ENSMUSG00000041476.13	ENST00000379494.4	845	5	15419	0	11987	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATGAATCTTTATCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	156497580	156535587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_156497670_156503926_156504080_156535187
ENSMUSG00000041477.15_119152389_119191875_1	chr6	+	655	7	ISM	ENSMUSG00000041477.15	ENST00000280665.11	1809	9	149	5155	140	-5155	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCATCACGGGGTCGCA	NA	NA	NA	NA	NA	NA	NA	NA	119152388	119191875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730
ENSMUSG00000041477.15_119175889_119192061_1	chr6	+	657	4	ISM	ENSMUSG00000041477.15	ENST00000280665.11	1809	9	23649	4969	23640	-4969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCCTGGTCCTGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	119175888	119192061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_119175956_119177782_119177913_119183430_119183560_119191730
ENSMUSG00000041477.15_119183506_119192272_1	chr6	+	596	2	ISM	ENSMUSG00000041477.15	ENST00000280665.11	1809	9	31266	4758	31257	-4758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGCCCCCTTCAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	119183505	119192272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_119183560_119191730
ENSMUSG00000041477.15_119192054_119194820_1	chr6	+	640	2	ISM	ENSMUSG00000041477.15	ENST00000280665.11	1809	9	39814	2210	39805	-2210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTCCTGCTGCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	119192053	119194820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_119192568_119194694
ENSMUSG00000041477.15_119192233_119196977_1	chr6	+	595	3	ISM	ENSMUSG00000041477.15	ENST00000280665.11	1809	9	39993	53	39984	-53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAGCATAATCTATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	119192232	119196977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_119192568_119194694_119194941_119196963
ENSMUSG00000041477.15_119192285_119197030_1	chr6	+	596	3	ISM	ENSMUSG00000041477.15	ENST00000280665.11	1809	9	40045	0	40036	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCACGTAACCAGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	119192284	119197030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_119192568_119194694_119194941_119196963
ENSMUSG00000041482.18_63144745_63166081_1	chr18	-	2201	14	ISM	ENSMUSG00000041482.18	ENSMUST00000238051.2	8337	54	353259	126	353259	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATATATTCCTCGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	63166081	63144744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63144872_63145700_63145885_63148810_63148891_63150595_63150725_63152261_63152435_63153687_63153781_63154214_63154404_63155468_63155617_63157482_63157642_63160587_63160803_63160906_63161055_63162125_63162259_63163345_63163599_63165911
ENSMUSG00000041482.18_63144793_63166081_1	chr18	-	2153	14	ISM	ENSMUSG00000041482.18	ENSMUST00000238051.2	8337	54	353259	174	353259	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGTTTGAAGAGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	63166081	63144792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63144872_63145700_63145885_63148810_63148891_63150595_63150725_63152261_63152435_63153687_63153781_63154214_63154404_63155468_63155617_63157482_63157642_63160587_63160803_63160906_63161055_63162125_63162259_63163345_63163599_63165911
ENSMUSG00000041482.18_63145779_63174723_1	chr18	-	2115	14	ISM	ENSMUSG00000041482.18	ENSMUST00000238051.2	8337	54	344617	1160	344617	-1160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTCCCAAGCCTTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	63174723	63145778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63145885_63148810_63148891_63150595_63150725_63152261_63152435_63153687_63153781_63154214_63154404_63155468_63155617_63157482_63157642_63160587_63160803_63160906_63161055_63162125_63162259_63163345_63163599_63165911_63166095_63174617
ENSMUSG00000041482.18_63150656_63175604_1	chr18	-	2123	13	ISM	ENSMUSG00000041482.18	ENSMUST00000238051.2	8337	54	343736	6037	343736	-6037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGGAATAGCATAGCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	63175604	63150655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63150725_63152261_63152435_63153687_63153781_63154214_63154404_63155468_63155617_63157482_63157642_63160587_63160803_63160906_63161055_63162125_63162259_63163345_63163599_63165911_63166095_63174617_63174877_63175503
ENSMUSG00000041482.18_63152314_63175726_1	chr18	-	2124	12	ISM	ENSMUSG00000041482.18	ENSMUST00000238051.2	8337	54	343614	7695	343614	-7695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCGACCCCAATAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	63175726	63152313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63152435_63153687_63153781_63154214_63154404_63155468_63155617_63157482_63157642_63160587_63160803_63160906_63161055_63162125_63162259_63163345_63163599_63165911_63166095_63174617_63174877_63175503
ENSMUSG00000041482.18_63152377_63175796_1	chr18	-	2131	12	ISM	ENSMUSG00000041482.18	ENSMUST00000238051.2	8337	54	343544	7758	343544	-7758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAACTCGAATTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	63175796	63152376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63152435_63153687_63153781_63154214_63154404_63155468_63155617_63157482_63157642_63160587_63160803_63160906_63161055_63162125_63162259_63163345_63163599_63165911_63166095_63174617_63174877_63175503
ENSMUSG00000041482.18_63154272_63183684_1	chr18	-	2120	11	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	335656	9653	335656	-9653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTTATCAACCAACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	63183684	63154271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63154404_63155468_63155617_63157482_63157642_63160587_63160803_63160906_63161055_63162125_63162259_63163345_63163599_63165911_63166095_63174617_63174877_63175503_63175912_63183602
ENSMUSG00000041482.18_63154326_63183732_1	chr18	-	2114	11	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	335608	9707	335608	-9707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTATCGTCTGGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	63183732	63154325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63154404_63155468_63155617_63157482_63157642_63160587_63160803_63160906_63161055_63162125_63162259_63163345_63163599_63165911_63166095_63174617_63174877_63175503_63175912_63183602
ENSMUSG00000041482.18_63155538_63186138_1	chr18	-	2108	11	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	333202	10919	333202	-10919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGATTTGTGTGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	63186138	63155537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63155617_63157482_63157642_63160587_63160803_63160906_63161055_63162125_63162259_63163345_63163599_63165911_63166095_63174617_63174877_63175503_63175912_63183602_63183770_63186034
ENSMUSG00000041482.18_63155594_63186201_1	chr18	-	2115	11	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	333139	10975	333139	-10975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTGCGGGCTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	63186201	63155593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63155617_63157482_63157642_63160587_63160803_63160906_63161055_63162125_63162259_63163345_63163599_63165911_63166095_63174617_63174877_63175503_63175912_63183602_63183770_63186034
ENSMUSG00000041482.18_63157573_63192774_1	chr18	-	2115	12	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	326566	12954	326566	-12954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCAAATCCGCTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	63192774	63157572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63157642_63160587_63160803_63160906_63161055_63162125_63162259_63163345_63163599_63165911_63166095_63174617_63174877_63175503_63175912_63183602_63183770_63186034_63186202_63190175_63190236_63192721
ENSMUSG00000041482.18_63160649_63197815_1	chr18	-	2119	12	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	321525	16030	321525	-16030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCTCGTGTTTGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	63197815	63160648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63160803_63160906_63161055_63162125_63162259_63163345_63163599_63165911_63166095_63174617_63174877_63175503_63175912_63183602_63183770_63186034_63186202_63190175_63190236_63192721_63192837_63197743
ENSMUSG00000041482.18_63160961_63203126_1	chr18	-	2118	13	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	316214	16342	316214	-16342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGACACTGTAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	63203126	63160960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63161055_63162125_63162259_63163345_63163599_63165911_63166095_63174617_63174877_63175503_63175912_63183602_63183770_63186034_63186202_63190175_63190236_63192721_63192837_63197743_63197851_63201974_63202047_63203026
ENSMUSG00000041482.18_63162212_63207716_1	chr18	-	2115	14	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	311624	17593	311624	-17593	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCCTTAAACAGAAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	63207716	63162211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63162259_63163345_63163599_63165911_63166095_63174617_63174877_63175503_63175912_63183602_63183770_63186034_63186202_63190175_63190236_63192721_63192837_63197743_63197851_63201974_63202047_63203026_63203149_63205917_63206008_63207651
ENSMUSG00000041482.18_63163543_63211735_1	chr18	-	2116	15	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	307605	18924	307605	-18924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGGATGACGAGCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	63211735	63163542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63163599_63165911_63166095_63174617_63174877_63175503_63175912_63183602_63183770_63186034_63186202_63190175_63190236_63192721_63192837_63197743_63197851_63201974_63202047_63203026_63203149_63205917_63206008_63207651_63207812_63208771_63208869_63211682
ENSMUSG00000041482.18_63174684_63214881_1	chr18	-	2149	14	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	304459	30065	304459	-30065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCATGCTGTCTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	63214881	63174683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63174877_63175503_63175912_63183602_63183770_63186034_63186202_63190175_63190236_63192721_63192837_63197743_63197851_63201974_63202047_63203026_63203149_63205917_63206008_63207651_63207812_63208771_63208869_63211682_63211927_63214734
ENSMUSG00000041482.18_63174809_63215989_1	chr18	-	2104	15	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	303351	30190	303351	-30190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTATGCCATGTATAAC	NA	NA	NA	NA	NA	NA	NA	NA	63215989	63174808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63174877_63175503_63175912_63183602_63183770_63186034_63186202_63190175_63190236_63192721_63192837_63197743_63197851_63201974_63202047_63203026_63203149_63205917_63206008_63207651_63207812_63208771_63208869_63211682_63211927_63214734_63214901_63215928
ENSMUSG00000041482.18_63175541_63216237_1	chr18	-	2133	15	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	303103	30922	303103	-30922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGAGCTGACAGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	63216237	63175540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63175912_63183602_63183770_63186034_63186202_63190175_63190236_63192721_63192837_63197743_63197851_63201974_63202047_63203026_63203149_63205917_63206008_63207651_63207812_63208771_63208869_63211682_63211927_63214734_63214901_63215928_63216031_63216144
ENSMUSG00000041482.18_63175735_63217811_1	chr18	-	2113	16	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	301529	31116	301529	-31116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGATGAGGAATTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	63217811	63175734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63175912_63183602_63183770_63186034_63186202_63190175_63190236_63192721_63192837_63197743_63197851_63201974_63202047_63203026_63203149_63205917_63206008_63207651_63207812_63208771_63208869_63211682_63211927_63214734_63214901_63215928_63216031_63216144_63216350_63217749
ENSMUSG00000041482.18_63175785_63217868_1	chr18	-	2120	16	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	301472	31166	301472	-31166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAATACGCAGCTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	63217868	63175784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63175912_63183602_63183770_63186034_63186202_63190175_63190236_63192721_63192837_63197743_63197851_63201974_63202047_63203026_63203149_63205917_63206008_63207651_63207812_63208771_63208869_63211682_63211927_63214734_63214901_63215928_63216031_63216144_63216350_63217749
ENSMUSG00000041482.18_63207698_63239314_1	chr18	-	2123	15	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	280026	63079	280026	34893	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTCGTGGCTGACATT	NA	NA	NA	NA	NA	NA	NA	NA	63239314	63207697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63207812_63208771_63208869_63211682_63211927_63214734_63214901_63215928_63216031_63216144_63216350_63217749_63217951_63219234_63219361_63219648_63219826_63223950_63224112_63225873_63226089_63226454_63226488_63232123_63232166_63235091_63235266_63239248
ENSMUSG00000041482.18_63208827_63241119_1	chr18	-	2111	15	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	278221	64208	278221	33764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTTGATCCAAGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	63241119	63208826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63208869_63211682_63211927_63214734_63214901_63215928_63216031_63216144_63216350_63217749_63217951_63219234_63219361_63219648_63219826_63223950_63224112_63225873_63226089_63226454_63226488_63232123_63232166_63235091_63235266_63239248_63239398_63241045
ENSMUSG00000041482.18_63211801_63241290_1	chr18	-	2122	14	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	278050	67182	278050	30790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTCCTGCTCTTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	63241290	63211800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63211927_63214734_63214901_63215928_63216031_63216144_63216350_63217749_63217951_63219234_63219361_63219648_63219826_63223950_63224112_63225873_63226089_63226454_63226488_63232123_63232166_63235091_63235266_63239248_63239398_63241045
ENSMUSG00000041482.18_63214755_63243019_1	chr18	-	2111	14	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	276321	70136	276321	27836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGATTTCATTCACTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	63243019	63214754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63214901_63215928_63216031_63216144_63216350_63217749_63217951_63219234_63219361_63219648_63219826_63223950_63224112_63225873_63226089_63226454_63226488_63232123_63232166_63235091_63235266_63239248_63239398_63241045_63241342_63242935
ENSMUSG00000041482.18_63216261_63248103_1	chr18	-	2150	14	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	271237	71642	271237	26330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCGACGCAGAAGAAAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	63248103	63216260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63216350_63217749_63217951_63219234_63219361_63219648_63219826_63223950_63224112_63225873_63226089_63226454_63226488_63232123_63232166_63235091_63235266_63239248_63239398_63241045_63241342_63242935_63243060_63246948_63247180_63247971
ENSMUSG00000041482.18_63219262_63254377_1	chr18	-	2112	15	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	264963	74643	264963	23329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCCTTTGCTCGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	63254377	63219261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63219361_63219648_63219826_63223950_63224112_63225873_63226089_63226454_63226488_63232123_63232166_63235091_63235266_63239248_63239398_63241045_63241342_63242935_63243060_63246948_63247180_63247971_63248121_63250719_63250859_63251976_63252016_63254293
ENSMUSG00000041482.18_63219658_63257737_1	chr18	-	2141	15	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	261603	75039	261603	22933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTTGGTGAGCCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	63257737	63219657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63219826_63223950_63224112_63225873_63226089_63226454_63226488_63232123_63232166_63235091_63235266_63239248_63239398_63241045_63241342_63242935_63243060_63246948_63247180_63247971_63248121_63250719_63250859_63251976_63252016_63254293_63254414_63257636
ENSMUSG00000041482.18_63224067_63278199_1	chr18	-	2133	15	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	241141	79448	241141	18524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCTAAAATTCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	63278199	63224066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63224112_63225873_63226089_63226454_63226488_63232123_63232166_63235091_63235266_63239248_63239398_63241045_63241342_63242935_63243060_63246948_63247180_63247971_63248121_63250719_63250859_63251976_63252016_63254293_63254414_63257636_63257800_63277985
ENSMUSG00000041482.18_63225929_63279946_1	chr18	-	2113	15	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	239394	81310	239394	16662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTGAGGAGGAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	63279946	63225928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63226089_63226454_63226488_63232123_63232166_63235091_63235266_63239248_63239398_63241045_63241342_63242935_63243060_63246948_63247180_63247971_63248121_63250719_63250859_63251976_63252016_63254293_63254414_63257636_63257800_63277985_63278200_63279866
ENSMUSG00000041482.18_63225986_63280050_1	chr18	-	2160	15	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	239290	81367	239290	16605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCAGAAGAGTGTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	63280050	63225985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63226089_63226454_63226488_63232123_63232166_63235091_63235266_63239248_63239398_63241045_63241342_63242935_63243060_63246948_63247180_63247971_63248121_63250719_63250859_63251976_63252016_63254293_63254414_63257636_63257800_63277985_63278200_63279866
ENSMUSG00000041482.18_63235138_63290418_1	chr18	-	2116	13	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	228922	90519	228922	7453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACCTCAAGTCCATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	63290418	63235137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63235266_63239248_63239398_63241045_63241342_63242935_63243060_63246948_63247180_63247971_63248121_63250719_63250859_63251976_63252016_63254293_63254414_63257636_63257800_63277985_63278200_63279866_63280078_63290265
ENSMUSG00000041482.18_63239283_63378759_1	chr18	-	2125	14	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	140581	94664	140581	3308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGCAAAACATGACCGGA	NA	NA	NA	NA	NA	NA	NA	NA	63378759	63239282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_63239398_63241045_63241342_63242935_63243060_63246948_63247180_63247971_63248121_63250719_63250859_63251976_63252016_63254293_63254414_63257636_63257800_63277985_63278200_63279866_63280078_63290265_63290429_63315906_63315950_63378641
ENSMUSG00000041483.15_136553006_136555047_1	chr1	+	1934	2	ISM	ENSMUSG00000041483.15	ENST00000367352.3	2921	3	263	940	263	-940	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACTAATGCAGGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	136553005	136555047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136553166_136553273
ENSMUSG00000041488.17_11755963_11764000_1	chr19	-	1007	5	ISM	ENSMUSG00000041488.17	ENST00000529177.5	1491	10	32216	-1	32085	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCACTCTTGTTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	11764000	11755962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_11756538_11760389_11760501_11762753_11762889_11763048_11763123_11763888
ENSMUSG00000041488.17_11756255_11769184_1	chr19	-	930	8	ISM	ENSMUSG00000041488.17	ENST00000529177.5	1491	10	27032	291	26901	-291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATCCCCGTGAGACAAGC	NA	NA	NA	NA	NA	NA	NA	NA	11769184	11756254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_11756538_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109
ENSMUSG00000041488.17_11756449_11796085_1	chr19	-	875	10	FSM	ENSMUSG00000041488.17	ENST00000529177.5	1491	10	131	485	0	-485	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACTTTATTTCCTTATA	NA	NA	NA	NA	NA	NA	NA	NA	11796085	11756448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_11756538_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ENSMUSG00000041488.17_11756449_11796214_1	chr19	-	1004	10	FSM	ENSMUSG00000041488.17	ENST00000529177.5	1491	10	2	485	2	-485	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACTTTATTTCCTTATA	NA	NA	NA	NA	NA	NA	NA	NA	11796214	11756448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_11756538_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ENSMUSG00000041491.9_15933703_15938410_1	chr19	-	338	3	ISM	ENSMUSG00000041491.9	ENSMUST00000047704.8	2548	15	23943	565	23943	-565	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAAGAGGCAGTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	15938410	15933702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_15933768_15936895_15937065_15938306
ENSMUSG00000041491.9_15953624_15958513_1	chr19	-	336	3	ISM	ENSMUSG00000041491.9	ENSMUST00000047704.8	2548	15	3840	20486	3840	-20486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTTATTGGTATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	15958513	15953623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_15953727_15956144_15956320_15958455
ENSMUSG00000041491.9_15956268_15959114_1	chr19	-	352	4	ISM	ENSMUSG00000041491.9	ENSMUST00000047704.8	2548	15	3239	23130	3239	-23130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGACCCGATCTGGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	15959114	15956267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_15956320_15958455_15958560_15958828_15958902_15958991
ENSMUSG00000041506.16_106354529_106360784_1	chr9	+	782	9	ISM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	61	1839	61	-1839	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTACAGCACTTCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	106354528	106360784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755
ENSMUSG00000041506.16_106354924_106360972_1	chr9	+	722	9	ISM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	456	1651	456	-1651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGATGCCCTGAGCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	106354923	106360972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945
ENSMUSG00000041506.16_106357893_106361080_1	chr9	+	803	8	ISM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	3425	1543	3425	-1543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGCGGTTTGCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	106357892	106361080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945
ENSMUSG00000041506.16_106357999_106361080_1	chr9	+	697	8	ISM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	3531	1543	3531	-1543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGCGGTTTGCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	106357998	106361080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945
ENSMUSG00000041506.16_106358398_106361436_1	chr9	+	738	9	ISM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	3930	1187	3930	-1187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGGCCACTCGCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	106358397	106361436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409
ENSMUSG00000041506.16_106358511_106361555_1	chr9	+	833	8	ISM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	4043	1068	4043	-1068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGGGTGCTCGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	106358510	106361555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409
ENSMUSG00000041506.16_106359056_106361667_1	chr9	+	722	8	ISM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	4588	956	4588	-956	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGGAGAGGGCTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	106359055	106361667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638
ENSMUSG00000041506.16_106360111_106362349_1	chr9	+	817	8	ISM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	5643	274	5643	-274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGATGGGGGTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	106360110	106362349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275
ENSMUSG00000041506.16_106360349_106362615_1	chr9	+	826	8	ISM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	5881	8	5881	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGTTCTCCCTTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	106360348	106362615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ENSMUSG00000041528.16_107936846_107944712_1	chr9	-	1413	12	ISM	ENSMUSG00000041528.16	ENST00000432042.5	2511	24	11823	0	11788	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATCTGGGGAGTAGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	107944712	107936845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594
ENSMUSG00000041528.16_107939046_107945721_1	chr9	-	1340	14	ISM	ENSMUSG00000041528.16	ENST00000432042.5	2511	24	10814	2200	10779	-2200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGTTGACCAAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	107945721	107939045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674
ENSMUSG00000041528.16_107940168_107946415_1	chr9	-	1372	14	ISM	ENSMUSG00000041528.16	ENST00000432042.5	2511	24	10120	3322	10085	-3322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCTGAGCAGCCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	107946415	107940167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370
ENSMUSG00000041528.16_107940784_107946939_1	chr9	-	1363	14	NNC	ENSMUSG00000041528.16	novel	2511	24	NA	NA	9561	-3938	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGCAGCTGTGAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	107946939	107940783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946492_107946874
ENSMUSG00000041540.17_143778561_143787073_1	chr6	-	1124	3	ISM	ENSMUSG00000041540.17	ENSMUST00000111748.8	1734	8	105759	0	105759	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAATAAGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	143787073	143778560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143779294_143780921_143781139_143786899
ENSMUSG00000041540.17_143778953_143819832_1	chr6	-	1121	6	ISM	ENSMUSG00000041540.17	ENSMUST00000111748.8	1734	8	73000	392	73000	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCCTGTCCGGTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	143819832	143778952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143779294_143780921_143781139_143786899_143787074_143790461_143790571_143807109_143807256_143819698
ENSMUSG00000041540.17_143779054_143853164_1	chr6	-	1116	7	ISM	ENSMUSG00000041540.17	ENST00000537393.5	2687	15	301976	518	39668	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGACCCGGATGTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	143853164	143779053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143779294_143780921_143781139_143786899_143787074_143790461_143790571_143807109_143807256_143819698_143819877_143853112
ENSMUSG00000041540.17_143779184_143887141_1	chr6	-	1146	8	ISM	ENSMUSG00000041540.17	ENST00000537393.5	2687	15	267999	648	5691	-362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCCGGAGCCCGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	143887141	143779183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143779294_143780921_143781139_143786899_143787074_143790461_143790571_143807109_143807256_143819698_143819877_143853112_143853260_143887076
ENSMUSG00000041540.17_143780921_143906643_1	chr6	-	1179	8	ISM	ENSMUSG00000041540.17	ENST00000537393.5	2687	15	248497	2385	-13811	-2099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGAACTTCCTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	143906643	143780920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143781139_143786899_143787074_143790461_143790571_143807109_143807256_143819698_143819877_143853112_143853260_143887076_143887163_143906522
ENSMUSG00000041540.17_143781096_143974051_1	chr6	-	1119	10	ISM	ENSMUSG00000041540.17	ENST00000537393.5	2687	15	181089	2560	-81219	-2274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGAGGAGCAGGCCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	143974051	143781095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143781139_143786899_143787074_143790461_143790571_143807109_143807256_143819698_143819877_143853112_143853260_143887076_143887163_143906522_143906644_143968894_143968964_143974005
ENSMUSG00000041540.17_143786899_143974178_1	chr6	-	1204	9	ISM	ENSMUSG00000041540.17	ENST00000537393.5	2687	15	180962	8363	-81346	-8077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGAGGTTGCTGAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	143974178	143786898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143787074_143790461_143790571_143807109_143807256_143819698_143819877_143853112_143853260_143887076_143887163_143906522_143906644_143968894_143968964_143974005
ENSMUSG00000041540.17_143787041_143987030_1	chr6	-	1098	10	ISM	ENSMUSG00000041540.17	ENST00000537393.5	2687	15	168110	8505	-94198	-8219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATCCAGGGGACGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	143987030	143787040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143787074_143790461_143790571_143807109_143807256_143819698_143819877_143853112_143853260_143887076_143887163_143906522_143906644_143968894_143968964_143974005_143974179_143986994
ENSMUSG00000041540.17_143790541_144062223_1	chr6	-	1091	10	ISM	ENSMUSG00000041540.17	ENST00000537393.5	2687	15	92917	12005	92917	-11719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTGGCAGTTAAACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	144062223	143790540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143790571_143807109_143807256_143819698_143819877_143853112_143853260_143887076_143887163_143906522_143906644_143968894_143968964_143974005_143974179_143986994_143987082_144062169
ENSMUSG00000041540.17_143807167_144062349_1	chr6	-	1130	9	ISM	ENSMUSG00000041540.17	ENST00000537393.5	2687	15	92791	28631	92791	-28345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGGAAGGTGGCCGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	144062349	143807166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143807256_143819698_143819877_143853112_143853260_143887076_143887163_143906522_143906644_143968894_143968964_143974005_143974179_143986994_143987082_144062169
ENSMUSG00000041540.17_143819698_144100949_1	chr6	-	1200	9	ISM	ENSMUSG00000041540.17	ENST00000537393.5	2687	15	54191	41162	54191	-40876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTATCTTTCTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	144100949	143819697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143819877_143853112_143853260_143887076_143887163_143906522_143906644_143968894_143968964_143974005_143974179_143986994_143987082_144062169_144062381_144100822
ENSMUSG00000041540.17_143853112_144100744_1	chr6	-	922	8	ISM	ENSMUSG00000041540.17	ENST00000545921.5	2555	15	55787	74290	54396	-74290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCTCTTCAATAAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	144100744	143853111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143853260_143887076_143887163_143906522_143906644_143968894_143968964_143974005_143974179_143986994_143987082_144062169_144062381_144100717
ENSMUSG00000041540.17_143853189_144100792_1	chr6	-	893	8	ISM	ENSMUSG00000041540.17	ENST00000545921.5	2555	15	55739	74367	54348	-74367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCTTGGTGCTGCCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	144100792	143853188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143853260_143887076_143887163_143906522_143906644_143968894_143968964_143974005_143974179_143986994_143987082_144062169_144062381_144100717
ENSMUSG00000041540.17_143887077_144100949_1	chr6	-	982	7	ISM	ENSMUSG00000041540.17	ENSMUST00000077160.12	2526	14	54229	108381	54191	-108255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCTGGAGACAACGCG	NA	NA	NA	NA	NA	NA	NA	NA	144100949	143887076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_143887163_143906522_143906647_143968894_143968964_143974005_143974179_143986994_143987082_144062169_144062381_144100717
ENSMUSG00000041540.17_143906582_144156472_1	chr6	-	911	7	NIC	ENSMUSG00000041540.17	novel	2555	15	NA	NA	59	-127760	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCTGCCCAGCAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	144156472	143906581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_143906647_143968894_143968964_143974005_143974179_143986994_143987082_144062169_144062381_144100717_144100950_144156398
ENSMUSG00000041548.5_116546550_116560923_1	chr5	-	1805	3	NNC	ENSMUSG00000041548.5	novel	1816	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGCTTCATTTAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	116560923	116546549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_116547539_116553465_116553530_116560171
ENSMUSG00000041548.5_116546550_116560923_2	chr5	-	1809	3	NNC	ENSMUSG00000041548.5	novel	1816	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGCTTCATTTAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	116560923	116546549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_116547550_116553465_116553530_116560178
ENSMUSG00000041556.9_148245078_148250525_1	chr4	+	932	6	FSM	ENSMUSG00000041556.9	ENSMUST00000047951.9	1288	6	0	356	0	-356	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAACAGTAGCGTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	148245077	148250525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_148245169_148248531_148248913_148249282_148249413_148249484_148249581_148250100_148250231_148250421
ENSMUSG00000041556.9_148248646_148250641_1	chr4	+	843	5	ISM	ENSMUSG00000041556.9	ENSMUST00000047951.9	1288	6	3568	240	3568	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCGCCCACGCCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	148248645	148250641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148248913_148249282_148249413_148249484_148249581_148250100_148250231_148250421
ENSMUSG00000041556.9_148248743_148250881_1	chr4	+	986	5	ISM	ENSMUSG00000041556.9	ENSMUST00000047951.9	1288	6	3665	0	3665	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCACAGATGAATGGACATC	NA	NA	NA	NA	NA	NA	NA	NA	148248742	148250881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148248913_148249282_148249413_148249484_148249581_148250100_148250231_148250421
ENSMUSG00000041560.13_15670108_15673049_1	chr7	-	1944	5	ISM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	6950	0	6950	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAAAATTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	15673049	15670107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013
ENSMUSG00000041560.13_15670212_15673095_1	chr7	-	1886	5	ISM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	6904	104	6904	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGCTGGAATCAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	15673095	15670211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013
ENSMUSG00000041560.13_15670337_15673425_1	chr7	-	1902	6	ISM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	6574	229	6574	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGTGCATACAAACATAC	NA	NA	NA	NA	NA	NA	NA	NA	15673425	15670336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378
ENSMUSG00000041560.13_15670378_15673488_1	chr7	-	1924	6	ISM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	6511	270	6511	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTAGGTTTTGGGGATC	NA	NA	NA	NA	NA	NA	NA	NA	15673488	15670377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378
ENSMUSG00000041560.13_15670588_15674101_1	chr7	-	1949	8	ISM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	5898	480	5898	-480	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCTTGAACTCAGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	15674101	15670587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062
ENSMUSG00000041560.13_15670810_15676153_1	chr7	-	1909	10	ISM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	3846	702	3846	-702	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGAGATCGGGGTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	15676153	15670809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099
ENSMUSG00000041560.13_15670865_15676200_1	chr7	-	1901	10	ISM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	3799	757	3799	-757	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAGCAGAAAAACTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	15676200	15670864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099
ENSMUSG00000041560.13_15670927_15676272_1	chr7	-	1911	10	ISM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	3727	819	3727	-819	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACCAGTAGGTCATATA	NA	NA	NA	NA	NA	NA	NA	NA	15676272	15670926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099
ENSMUSG00000041560.13_15671179_15679279_1	chr7	-	1860	12	ISM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	720	1071	720	-1071	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGATTGTGAGCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	15679279	15671178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214
ENSMUSG00000041560.13_15671318_15679980_1	chr7	-	1947	13	FSM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	19	1210	19	-1210	multi-exon	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGGTTACCTCTGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	15679980	15671317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
ENSMUSG00000041565.18_68762731_69071617_1	chr17	+	1294	12	ISM	ENSMUSG00000041565.18	ENST00000400105.6	1665	14	45	13342	45	-13339	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGAGACATCCCCCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	68762730	69071617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_68762793_68764192_68764329_68766754_68766847_68768445_68768601_68769938_68770016_68791707_68791794_68793867_68793979_68866743_68866859_68894091_68894195_68937179_68937354_68948493_68948565_69071505
ENSMUSG00000041565.18_68762776_69071692_1	chr17	+	1324	12	ISM	ENSMUSG00000041565.18	ENST00000400105.6	1665	14	90	13267	90	-13264	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAGATGGACAGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	68762775	69071692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_68762793_68764192_68764329_68766754_68766847_68768445_68768601_68769938_68770016_68791707_68791794_68793867_68793979_68866743_68866859_68894091_68894195_68937179_68937354_68948493_68948565_69071505
ENSMUSG00000041565.18_68764191_69081317_1	chr17	+	1395	12	ISM	ENSMUSG00000041565.18	ENST00000400105.6	1665	14	1505	3642	1505	-3639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATAAATGGGAGAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	68764190	69081317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_68764329_68766754_68766847_68768445_68768601_68769938_68770016_68791707_68791794_68793867_68793979_68866743_68866859_68894091_68894195_68937179_68937354_68948493_68948565_69071505_69071716_69081254
ENSMUSG00000041565.18_68764299_69084817_1	chr17	+	1310	13	ISM	ENSMUSG00000041565.18	ENST00000400105.6	1665	14	1613	142	1613	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGACCCAGGCAGATA	NA	NA	NA	NA	NA	NA	NA	NA	68764298	69084817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_68764329_68766754_68766847_68768445_68768601_68769938_68770016_68791707_68791794_68793867_68793979_68866743_68866859_68894091_68894195_68937179_68937354_68948493_68948565_69071505_69071716_69081254_69081318_69084794
ENSMUSG00000041565.18_68766754_69084840_1	chr17	+	1304	12	ISM	ENSMUSG00000041565.18	ENST00000400105.6	1665	14	4068	119	4068	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAGTGATGAGAATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	68766753	69084840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_68766847_68768445_68768601_68769938_68770016_68791707_68791794_68793867_68793979_68866743_68866859_68894091_68894195_68937179_68937354_68948493_68948565_69071505_69071716_69081254_69081318_69084794
ENSMUSG00000041565.18_68766754_69084959_1	chr17	+	1423	12	ISM	ENSMUSG00000041565.18	ENST00000400105.6	1665	14	4068	0	4068	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGGTCATCCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	68766753	69084959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_68766847_68768445_68768601_68769938_68770016_68791707_68791794_68793867_68793979_68866743_68866859_68894091_68894195_68937179_68937354_68948493_68948565_69071505_69071716_69081254_69081318_69084794
ENSMUSG00000041565.18_68768446_69084959_1	chr17	+	1330	11	ISM	ENSMUSG00000041565.18	ENST00000400105.6	1665	14	5760	0	5760	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGGTCATCCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	68768445	69084959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_68768601_68769938_68770016_68791707_68791794_68793867_68793979_68866743_68866859_68894091_68894195_68937179_68937354_68948493_68948565_69071505_69071716_69081254_69081318_69084794
ENSMUSG00000041571.11_15651418_15654042_1	chr7	-	221	3	ISM	ENSMUSG00000041571.11	ENSMUST00000044355.11	736	6	2285	285	2285	-285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1018	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGACTGAAATGTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	15654042	15651417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_15651465_15653772_15653872_15653967
ENSMUSG00000041571.11_15653773_15654283_1	chr7	-	228	3	ISM	ENSMUSG00000041571.11	ENSMUST00000044355.11	736	6	2044	2640	2044	-2640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGAGACTGTTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	15654283	15653772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_15653872_15653967_15654043_15654229
ENSMUSG00000041571.11_15653851_15656213_1	chr7	-	212	5	ISM	ENSMUSG00000041571.11	ENSMUST00000044355.11	736	6	114	2718	114	-2718	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	829	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGAGCAAGTTCCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	15656213	15653850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_15653872_15653967_15654043_15654229_15654284_15654373_15654399_15656176
ENSMUSG00000041577.6_133840293_133842765_1	chr1	-	810	2	ISM	ENSMUSG00000041577.6	ENSMUST00000048432.6	3615	3	6387	2251	6387	-2251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGGGGTCCACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	133842765	133840292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_133840520_133842182
ENSMUSG00000041594.19_123157390_123170798_1	chr14	-	773	7	ISM	ENSMUSG00000041594.19	ENST00000328767.9	2047	15	44908	78	44908	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGAGTGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	123170798	123157389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739
ENSMUSG00000041594.19_123157493_123178764_1	chr14	-	739	8	ISM	ENSMUSG00000041594.19	ENST00000328767.9	2047	15	36942	181	36942	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGACCCTGTGGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	123178764	123157492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716
ENSMUSG00000041594.19_123163422_123179343_1	chr14	-	761	7	ISM	ENSMUSG00000041594.19	ENST00000328767.9	2047	15	36363	6110	36363	-6110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTCATTGGCAAACG	NA	NA	NA	NA	NA	NA	NA	NA	123179343	123163421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226
ENSMUSG00000041594.19_123165017_123180616_1	chr14	-	746	7	ISM	ENSMUSG00000041594.19	ENST00000328767.9	2047	15	35090	7705	35090	-7705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGCACAGCCTGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	123180616	123165016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566
ENSMUSG00000041594.19_123170603_123182244_1	chr14	-	760	6	ISM	ENSMUSG00000041594.19	ENST00000328767.9	2047	15	33462	13291	33462	-13291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTTCATGCCATGAATAAC	NA	NA	NA	NA	NA	NA	NA	NA	123182244	123170602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085
ENSMUSG00000041594.19_123170740_123182985_1	chr14	-	818	6	ISM	ENSMUSG00000041594.19	ENST00000328767.9	2047	15	32721	13428	32721	-13428	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACAGTTGTACGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	123182985	123170739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919
ENSMUSG00000041594.19_123179227_123200797_1	chr14	-	825	6	ISM	ENSMUSG00000041594.19	ENSMUST00000148661.2	2719	18	19757	22055	14909	-21915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCATAGGGCTGGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	123200797	123179226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709
ENSMUSG00000041594.19_123179361_123215536_1	chr14	-	742	7	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	170	-22049	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCCTGCAAGCAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	123215536	123179360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_-_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123215485
ENSMUSG00000041594.19_123180661_123215706_1	chr14	-	780	6	NIC	ENSMUSG00000041594.19	novel	2047	15	NA	NA	0	-23349	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTGGAGGGTAATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	123215706	123180660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_-_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123215485
ENSMUSG00000041607.18_82572705_82602370_10	chr18	+	250	3	FSM	ENSMUSG00000041607.18	ENST00000528160.1	369	3	54	65	0	-65	multi-exon	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTAGAGCAGACCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	82572704	82602370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_82572794_82597156_82597184_82602236
ENSMUSG00000041607.18_82572705_82602370_2	chr18	+	246	2	NNC	ENSMUSG00000041607.18	novel	1947	5	NA	NA	0	-65	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTAGAGCAGACCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	82572704	82602370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_82572795_82602214
ENSMUSG00000041607.18_82572705_82602370_6	chr18	+	237	2	NNC	ENSMUSG00000041607.18	novel	1947	5	NA	NA	0	-65	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTAGAGCAGACCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	82572704	82602370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_82572808_82602236
ENSMUSG00000041607.18_82572705_82602370_9	chr18	+	249	2	NNC	ENSMUSG00000041607.18	novel	1947	5	NA	NA	0	-65	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTAGAGCAGACCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	82572704	82602370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_82572798_82602214
ENSMUSG00000041607.18_82597155_82602435_1	chr18	+	224	2	NNC	ENSMUSG00000041607.18	novel	369	3	NA	NA	24450	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCGACTGGTTAAAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	82597154	82602435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_82597184_82602240
ENSMUSG00000041617.11_17464564_17468602_1	chr16	+	1048	8	FSM	ENSMUSG00000041617.11	ENSMUST00000056962.11	1273	8	225	0	225	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAAGCTTCCTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	17464563	17468602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_17464648_17465471_17465517_17465930_17465991_17466658_17466825_17467593_17467778_17467858_17467939_17468012_17468070_17468230
ENSMUSG00000041623.18_113575273_113579875_1	chr11	+	1541	2	ISM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	0	5598	0	-5598	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGCTGTTACCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	113575272	113579875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_113575538_113578599
ENSMUSG00000041623.18_113575402_113579923_1	chr11	+	1460	2	ISM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	129	5550	129	-5550	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTCCAGAACTCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	113575401	113579923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_113575538_113578599
ENSMUSG00000041623.18_113578605_113582574_1	chr11	+	1463	2	ISM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	3332	2899	3332	-2899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGCTGATAGCAGGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	113578604	113582574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_113580048_113582554
ENSMUSG00000041623.18_113578706_113583245_1	chr11	+	1472	3	ISM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	3433	2228	3433	-2228	internal_fragment	TRUE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGAGTGGTGTCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	113578705	113583245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_113580048_113582554_113582660_113583220
ENSMUSG00000041623.18_113578851_113585473_1	chr11	+	1546	4	ISM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	3578	0	3578	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	113578850	113585473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_113580048_113582554_113582660_113583220_113583329_113585337
ENSMUSG00000041623.18_113578916_113585473_1	chr11	+	1481	4	ISM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	3643	0	3643	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	113578915	113585473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_113580048_113582554_113582660_113583220_113583329_113585337
ENSMUSG00000041623.18_113578999_113585473_1	chr11	+	1398	4	ISM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	3726	0	3726	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	113578998	113585473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_113580048_113582554_113582660_113583220_113583329_113585337
ENSMUSG00000041629.8_113554038_113568146_1	chr11	-	349	2	ISM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	6835	1893	6803	135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGCCTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	113568146	113554037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_113554370_113568129
ENSMUSG00000041629.8_113554159_113574734_1	chr11	-	358	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	247	2014	215	14	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGAGGCCGGCCGCCGACA	NA	NA	NA	NA	NA	NA	NA	NA	113574734	113554158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_113554370_113568129_113568230_113574687
ENSMUSG00000041629.8_113554173_113574981_1	chr11	-	491	2	FSM	ENSMUSG00000041629.8	ENST00000581110.1	459	2	-32	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGCCTACAGCACCGAG	NA	NA	NA	NA	NA	NA	NA	NA	113574981	113554172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_113554370_113574687
ENSMUSG00000041629.8_113554173_113574981_2	chr11	-	483	2	NNC	ENSMUSG00000041629.8	novel	459	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGCCTACAGCACCGAG	NA	NA	NA	NA	NA	NA	NA	NA	113574981	113554172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_113554362_113574687
ENSMUSG00000041629.8_113554210_113574799_1	chr11	-	372	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	182	2065	150	-37	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCCACATCAACCAGACC	NA	NA	NA	NA	NA	NA	NA	NA	113574799	113554209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_113554370_113568129_113568230_113574687
ENSMUSG00000041629.8_113554286_113574855_1	chr11	-	352	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	126	2141	94	-113	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACACCATCCCCGGATC	NA	NA	NA	NA	NA	NA	NA	NA	113574855	113554285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_113554370_113568129_113568230_113574687
ENSMUSG00000041629.8_113568140_113574981_1	chr11	-	384	2	ISM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	0	15995	0	-13967	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACAGAGGTAGGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	113574981	113568139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_113568230_113574687
ENSMUSG00000041632.8_99481294_99551851_1	chr13	+	1630	11	FSM	ENSMUSG00000041632.8	ENSMUST00000052249.7	1849	11	0	219	0	-219	multi-exon	FALSE	canonical	NA	NA	NA	NA	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGTGCTTGCTCCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	99481293	99551851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
ENSMUSG00000041632.8_99481294_99551924_1	chr13	+	1703	11	FSM	ENSMUSG00000041632.8	ENSMUST00000052249.7	1849	11	0	146	0	-146	multi-exon	FALSE	canonical	NA	NA	NA	NA	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCCACTGTTAACACTG	NA	NA	NA	NA	NA	NA	NA	NA	99481293	99551924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
ENSMUSG00000041632.8_99484901_99552070_1	chr13	+	1698	10	ISM	ENSMUSG00000041632.8	ENSMUST00000052249.7	1849	11	3607	0	3607	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGTGGTGTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	99484900	99552070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
ENSMUSG00000041642.19_136059313_136072952_1	chr1	+	496	3	ISM	ENSMUSG00000041642.19	ENST00000422435.2	5352	35	171	28471	171	-28471	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCACATCTCTTCAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	136059312	136072952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136059501_136072336_136072560_136072867
ENSMUSG00000041642.19_136059389_136081948_1	chr1	+	2066	14	ISM	ENSMUSG00000041642.19	ENST00000422435.2	5352	35	247	19475	247	-19475	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGTACGAGGAGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	136059388	136081948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841
ENSMUSG00000041642.19_136059472_136081976_1	chr1	+	2011	14	ISM	ENSMUSG00000041642.19	ENST00000422435.2	5352	35	330	19447	330	-19447	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGAACAAGATCCGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	136059471	136081976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841
ENSMUSG00000041642.19_136072442_136083913_1	chr1	+	2013	14	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	108	18418	108	-17510	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCTGCAGAAGCTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	136072441	136083913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834
ENSMUSG00000041642.19_136072501_136083972_1	chr1	+	2013	14	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	167	18359	167	-17451	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGCTATGAAAGGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	136072500	136083972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834
ENSMUSG00000041642.19_136075310_136087059_1	chr1	+	2014	15	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	2976	15272	2976	-14364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGGGCTGAGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	136075309	136087059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981
ENSMUSG00000041642.19_136075470_136087214_1	chr1	+	2095	14	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	3136	15117	3136	-14209	internal_fragment	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGAGTCTGAGTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	136075469	136087214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981
ENSMUSG00000041642.19_136076402_136087881_1	chr1	+	2028	14	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	4068	14450	4068	-13542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTACATCAACGACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	136076401	136087881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750
ENSMUSG00000041642.19_136078868_136089309_1	chr1	+	2087	14	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	6534	13022	6534	-12114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGCATAAGGGTAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	136078867	136089309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143
ENSMUSG00000041642.19_136081841_136097061_1	chr1	+	2098	16	ISM	ENSMUSG00000041642.19	ENST00000422435.2	5352	35	22699	4362	9507	-4362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTGCCGACTTGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	136081840	136097061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924
ENSMUSG00000041642.19_136081914_136096957_1	chr1	+	1882	15	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	9580	5374	9580	-4466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCGGACGGCCCCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	136081913	136096957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924
ENSMUSG00000041642.19_136081983_136096996_1	chr1	+	1852	15	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	9649	5335	9649	-4427	internal_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCACACCAAGCCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	136081982	136096996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924
ENSMUSG00000041642.19_136083845_136097741_1	chr1	+	1871	15	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	11511	4590	11511	-3682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAACCTGGTGACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	136083844	136097741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726
ENSMUSG00000041642.19_136083905_136097787_1	chr1	+	1857	15	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	11571	4544	11571	-3636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAACAACGTGGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	136083904	136097787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726
ENSMUSG00000041642.19_136083951_136097845_1	chr1	+	1869	15	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	11617	4486	11617	-3578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCTCCTACATCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	136083950	136097845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726
ENSMUSG00000041642.19_136085229_136098954_1	chr1	+	1894	15	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	12895	3377	12895	-2469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCAGATCAACCAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	136085228	136098954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879
ENSMUSG00000041642.19_136086980_136099443_1	chr1	+	1955	14	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	14646	2888	14646	-1980	internal_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTACAACTGCCTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	136086979	136099443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325
ENSMUSG00000041642.19_136087011_136100037_1	chr1	+	2104	16	ISM	ENSMUSG00000041642.19	ENST00000422435.2	5352	35	27869	1386	14677	-1386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACCTGGACCAGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	136087010	136100037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896
ENSMUSG00000041642.19_136087050_136100037_1	chr1	+	2065	16	ISM	ENSMUSG00000041642.19	ENST00000422435.2	5352	35	27908	1386	14716	-1386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACCTGGACCAGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	136087049	136100037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896
ENSMUSG00000041642.19_136087172_136100037_1	chr1	+	1904	15	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	14838	2294	14838	-1386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACCTGGACCAGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	136087171	136100037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896
ENSMUSG00000041642.19_136087200_136100037_1	chr1	+	1876	15	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	14866	2294	14866	-1386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACCTGGACCAGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	136087199	136100037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896
ENSMUSG00000041642.19_136087472_136100584_1	chr1	+	1839	15	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	15138	1747	15138	-839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCCGGCCGGCCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	136087471	136100584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540
ENSMUSG00000041642.19_136087749_136100740_1	chr1	+	1945	14	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	15415	1591	15415	-683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTGCTAGGCAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	136087748	136100740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540
ENSMUSG00000041642.19_136087892_136101832_1	chr1	+	1860	15	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	15558	499	15558	409	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGACTAAAGGTGGCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	136087891	136101832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
ENSMUSG00000041642.19_136089225_136102088_1	chr1	+	1879	13	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	16891	243	16891	-243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCTCAACTGGCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	136089224	136102088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
ENSMUSG00000041642.19_136090523_136102332_1	chr1	+	1930	10	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	18189	-1	18189	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAATCCCAGTGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	136090522	136102332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
ENSMUSG00000041642.19_136090687_136102332_1	chr1	+	1766	10	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	18353	-1	18353	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAATCCCAGTGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	136090686	136102332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
ENSMUSG00000041642.19_136099395_136101279_1	chr1	+	490	4	ISM	ENSMUSG00000041642.19	ENST00000422435.2	5352	35	40253	144	27061	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGGCCGCGCCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	136099394	136101279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136099444_136099896_136100068_136100540_136100741_136101209
ENSMUSG00000041642.19_136100589_136101547_1	chr1	+	490	2	ISM	ENSMUSG00000041642.19	ENST00000422435.2	5352	35	41447	-124	28255	124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGGGACACCAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	136100588	136101547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136100741_136101209
ENSMUSG00000041642.19_136100659_136101636_1	chr1	+	509	2	ISM	ENSMUSG00000041642.19	ENST00000422435.2	5352	35	41517	-213	28325	213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTAAGCAGCATCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	136100658	136101636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136100741_136101209
ENSMUSG00000041642.19_136102079_136103609_1	chr1	+	487	2	ISM	ENSMUSG00000041642.19	ENST00000332129.6	7017	35	42937	562	29745	-562	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTGGGAGTGTTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	136102078	136103609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136102509_136103552
ENSMUSG00000041642.19_136102148_136103685_1	chr1	+	494	2	ISM	ENSMUSG00000041642.19	ENST00000332129.6	7017	35	43006	486	29814	-486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAGCCCGGACCTTACA	NA	NA	NA	NA	NA	NA	NA	NA	136102147	136103685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136102509_136103552
ENSMUSG00000041642.19_136102214_136103748_1	chr1	+	491	2	ISM	ENSMUSG00000041642.19	ENST00000332129.6	7017	35	43072	423	29880	-423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTACAGAAACACGTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	136102213	136103748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_136102509_136103552
ENSMUSG00000041645.15_103374242_103391931_1	chr12	-	2955	9	FSM	ENSMUSG00000041645.15	ENSMUST00000110001.4	3063	9	108	0	108	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGAGGGTGTTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	103391931	103374241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103391784
ENSMUSG00000041645.15_103375877_103384476_1	chr12	-	1375	5	ISM	ENSMUSG00000041645.15	ENSMUST00000221211.2	2669	8	7607	0	7563	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGGTTGAGTAAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	103384476	103375876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322
ENSMUSG00000041645.15_103377491_103385544_1	chr12	-	1156	5	ISM	ENSMUSG00000041645.15	ENSMUST00000221211.2	2669	8	6539	1614	6495	-1614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGAGGATGTGATCAACT	NA	NA	NA	NA	NA	NA	NA	NA	103385544	103377490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220
ENSMUSG00000041645.15_103384389_103390691_1	chr12	-	1171	3	ISM	ENSMUSG00000041645.15	ENSMUST00000221211.2	2669	8	1392	8512	1348	-8512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTCGGCTCTGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	103390691	103384388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_103384477_103385220_103385743_103390130
ENSMUSG00000041650.16_122854198_122927549_1	chr14	+	823	9	ISM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	82447	199807	82447	-199807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCTATTATGATCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	122854197	122927549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510
ENSMUSG00000041650.16_122896091_122938559_1	chr14	+	805	8	ISM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	124340	188797	124340	-188797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGATGGCTTCAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	122896090	122938559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466
ENSMUSG00000041650.16_122938502_123127049_1	chr14	+	805	8	ISM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	166751	307	166751	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACAGGAGCACTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	122938501	123127049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
ENSMUSG00000041650.16_122951467_123127232_1	chr14	+	880	7	ISM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	179716	124	179716	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTAAATATTAGTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	122951466	123127232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
ENSMUSG00000041650.16_123027811_123127357_1	chr14	+	788	5	ISM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	256060	-1	256060	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCTTGCAATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	123027810	123127357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
ENSMUSG00000041654.16_113135679_113141306_1	chr11	-	1815	3	ISM	ENSMUSG00000041654.16	ENSMUST00000071539.10	2664	10	315276	0	315276	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	NA	NA	NA	NA	NA	NA	NA	NA	113141306	113135678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_113137322_113138545_113138705_113141293
ENSMUSG00000041654.16_113135924_113260608_1	chr11	-	1781	5	ISM	ENSMUSG00000041654.16	ENSMUST00000071539.10	2664	10	195974	245	195974	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAACCTCGGCGGGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	113260608	113135923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553
ENSMUSG00000041654.16_113135980_113260656_1	chr11	-	1773	5	ISM	ENSMUSG00000041654.16	ENSMUST00000071539.10	2664	10	195926	301	195926	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCGTCTCTCCAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	113260656	113135979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553
ENSMUSG00000041654.16_113136098_113354821_1	chr11	-	1747	6	ISM	ENSMUSG00000041654.16	ENSMUST00000071539.10	2664	10	101761	419	101761	-419	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCATCTGAGCCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	113354821	113136097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797
ENSMUSG00000041654.16_113136155_113354879_1	chr11	-	1748	6	ISM	ENSMUSG00000041654.16	ENSMUST00000071539.10	2664	10	101703	476	101703	-476	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAGACTACATGCTAACC	NA	NA	NA	NA	NA	NA	NA	NA	113354879	113136154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797
ENSMUSG00000041654.16_113136263_113414329_1	chr11	-	1720	7	ISM	ENSMUSG00000041654.16	ENSMUST00000071539.10	2664	10	42253	584	42253	-584	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAATCTGGCCAGCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	113414329	113136262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291
ENSMUSG00000041654.16_113136317_113414412_1	chr11	-	1749	7	ISM	ENSMUSG00000041654.16	ENSMUST00000071539.10	2664	10	42170	638	42170	-638	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGCCACTTGGAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	113414412	113136316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291
ENSMUSG00000041654.16_113136557_113456582_1	chr11	-	1786	10	FSM	ENSMUSG00000041654.16	ENSMUST00000071539.10	2664	10	0	878	0	-878	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGTTTTAAGCTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	113456582	113136556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
ENSMUSG00000041658.13_151923155_151954314_1	chrX	+	1448	11	NNC	ENSMUSG00000041658.13	novel	1459	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAATATTGTTTCACACA	NA	NA	NA	NA	NA	NA	NA	NA	151923154	151954314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941280_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ENSMUSG00000041658.13_151923155_151954314_2	chrX	+	1446	11	NNC	ENSMUSG00000041658.13	novel	1459	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAATATTGTTTCACACA	NA	NA	NA	NA	NA	NA	NA	NA	151923154	151954314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954220
ENSMUSG00000041658.13_151923155_151954314_4	chrX	+	1449	11	NNC	ENSMUSG00000041658.13	novel	1459	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAATATTGTTTCACACA	NA	NA	NA	NA	NA	NA	NA	NA	151923154	151954314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_151923572_151924359_151924394_151926971_151927072_151931453_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ENSMUSG00000041658.13_151923155_151954314_5	chrX	+	1450	11	NNC	ENSMUSG00000041658.13	novel	1459	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAATATTGTTTCACACA	NA	NA	NA	NA	NA	NA	NA	NA	151923154	151954314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936131_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ENSMUSG00000041658.13_151923155_151954314_6	chrX	+	1455	11	FSM	ENSMUSG00000041658.13	ENSMUST00000039720.11	2258	11	178	625	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAATATTGTTTCACACA	NA	NA	NA	NA	NA	NA	NA	NA	151923154	151954314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ENSMUSG00000041658.13_151923445_151954616_1	chrX	+	1383	10	NIC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	290	-94	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCAGCACCTCTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	151923444	151954616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chrX_+_151923572_151924359_151924394_151926971_151927072_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ENSMUSG00000041670.20_22358459_22416752_1	chr1	-	1136	6	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	108982	-1	-30723	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGCAGTAAGAATCGACA	NA	NA	NA	NA	NA	NA	NA	NA	22416752	22358458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516
ENSMUSG00000041670.20_22358459_22492056_1	chr1	-	1177	8	ISM	ENSMUSG00000041670.20	ENST00000425662.6	2687	22	56369	-16	33678	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGCAGTAAGAATCGACA	NA	NA	NA	NA	NA	NA	NA	NA	22492056	22358458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22467674_22467788_22474667_22474740_22491964
ENSMUSG00000041670.20_22358646_22449686_1	chr1	-	1151	8	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	76048	186	-63657	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTCCTAACCTTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	22449686	22358645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651
ENSMUSG00000041670.20_22358646_22498744_1	chr1	-	1206	11	ISM	ENSMUSG00000041670.20	ENST00000425662.6	2687	22	49681	171	26990	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTCCTAACCTTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	22498744	22358645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715
ENSMUSG00000041670.20_22358775_22449734_1	chr1	-	1070	8	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	76000	315	-63705	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTGATTGGATGGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	22449734	22358774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651
ENSMUSG00000041670.20_22358796_22498801_1	chr1	-	1113	11	ISM	ENSMUSG00000041670.20	ENST00000425662.6	2687	22	49624	321	26933	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAACTTGATCTGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	22498801	22358795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715
ENSMUSG00000041670.20_22358828_22467706_1	chr1	-	1079	9	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	58028	368	58028	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTTATGGGTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	22467706	22358827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22467674
ENSMUSG00000041670.20_22358850_22498851_1	chr1	-	1109	11	ISM	ENSMUSG00000041670.20	ENST00000425662.6	2687	22	49574	375	26883	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTATGGAAGAATGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	22498851	22358849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715
ENSMUSG00000041670.20_22360282_22467787_1	chr1	-	1125	8	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	57947	1822	57947	-1636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAAACTTTGCTTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	22467787	22360281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22467674
ENSMUSG00000041670.20_22360282_22503094_1	chr1	-	1189	11	ISM	ENSMUSG00000041670.20	ENST00000425662.6	2687	22	45331	1807	22640	-1636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAAACTTTGCTTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	22503094	22360281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715_22498873_22503022
ENSMUSG00000041670.20_22360388_22474729_1	chr1	-	1081	9	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	51005	1928	51005	-1742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGTATTGCCAAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	22474729	22360387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22467674_22467788_22474667
ENSMUSG00000041670.20_22361237_22492056_1	chr1	-	1147	9	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	33678	2777	33678	-2591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGAAAAGTTGCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	22492056	22361236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22467674_22467788_22474667_22474740_22491964
ENSMUSG00000041670.20_22361237_22504253_1	chr1	-	1203	11	ISM	ENSMUSG00000041670.20	ENST00000425662.6	2687	22	44172	2762	21481	-2591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGAAAAGTTGCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	22504253	22361236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22361339_22363045_22363159_22367081_22367221_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715_22498873_22503022_22503095_22504097
ENSMUSG00000041670.20_22363045_22497745_1	chr1	-	1141	10	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	27989	4585	27989	-4399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATTCTTTTTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	22497745	22363044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711
ENSMUSG00000041670.20_22363069_22504424_1	chr1	-	1147	11	ISM	ENSMUSG00000041670.20	ENST00000425662.6	2687	22	44001	4594	21310	-4423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTCGCCACCCCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	22504424	22363068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22363159_22367081_22367221_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715_22498873_22503022_22503095_22504097_22504252_22504353
ENSMUSG00000041670.20_22367082_22504527_1	chr1	-	1160	10	ISM	ENSMUSG00000041670.20	ENST00000425662.6	2687	22	43898	8607	21207	-8436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGACATGATGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	22504527	22367081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22367221_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715_22498873_22503022_22503095_22504097_22504252_22504353
ENSMUSG00000041670.20_22367168_22498790_1	chr1	-	1108	10	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	26944	8708	26944	-8522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCGGCTGAAATGCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	22498790	22367167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715
ENSMUSG00000041670.20_22367184_22507315_1	chr1	-	1100	11	ISM	ENSMUSG00000041670.20	ENST00000425662.6	2687	22	41110	8709	18419	-8538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTACGGAAACGGGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	22507315	22367183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22367221_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715_22498873_22503022_22503095_22504097_22504252_22504353_22504526_22507271
ENSMUSG00000041670.20_22416706_22504143_1	chr1	-	1066	11	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	21591	58246	21591	-58060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCATCATCAAGAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	22504143	22416705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22416753_22443567_22443735_22449651_22449765_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715_22498873_22503022_22503095_22504097
ENSMUSG00000041670.20_22443568_22504253_1	chr1	-	1129	10	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	21481	85108	21481	-84922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTGGCAATGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	22504253	22443567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22443735_22449651_22449765_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715_22498873_22503022_22503095_22504097
ENSMUSG00000041670.20_22443673_22504416_1	chr1	-	1085	11	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	21318	85213	21318	-85027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTCAGTGATGTGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	22504416	22443672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22443735_22449651_22449765_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715_22498873_22503022_22503095_22504097_22504252_22504353
ENSMUSG00000041670.20_22443716_22504488_1	chr1	-	1114	11	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	21246	85256	21246	-85070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACAGAAGCTGTGATAAC	NA	NA	NA	NA	NA	NA	NA	NA	22504488	22443715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22443735_22449651_22449765_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715_22498873_22503022_22503095_22504097_22504252_22504353
ENSMUSG00000041670.20_22467675_22507402_1	chr1	-	1150	10	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	18332	109215	18332	-109029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCCAAATAAGCGACATC	NA	NA	NA	NA	NA	NA	NA	NA	22507402	22467674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715_22498873_22503022_22503095_22504097_22504252_22504353_22504526_22507271
ENSMUSG00000041670.20_22467753_22511865_1	chr1	-	1132	11	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	13869	109293	13869	-109107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGACACATCCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	22511865	22467752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715_22498873_22503022_22503095_22504097_22504252_22504353_22504526_22507271_22507403_22511805
ENSMUSG00000041670.20_22492008_22518548_1	chr1	-	1115	11	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	7186	133548	7186	-133362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGAGACCAGATACTAGT	NA	NA	NA	NA	NA	NA	NA	NA	22518548	22492007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22492055_22496120_22496184_22497711_22497838_22498715_22498873_22503022_22503095_22504097_22504252_22504353_22504526_22507271_22507403_22511805_22511919_22514768_22514816_22518515
ENSMUSG00000041670.20_22497712_22522334_1	chr1	-	1196	10	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	3400	139252	3400	-139066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTTTCCCAAGTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	22522334	22497711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22497838_22498715_22498873_22503022_22503095_22504097_22504252_22504353_22504526_22507271_22507403_22511805_22511919_22514768_22514816_22518515_22518640_22522234
ENSMUSG00000041670.20_22498715_22523833_1	chr1	-	1182	10	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	1901	140255	1901	-140069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTCTGGAGCAGGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	22523833	22498714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22498873_22503022_22503095_22504097_22504252_22504353_22504526_22507271_22507403_22511805_22511919_22514768_22514816_22518515_22518640_22522234_22522335_22523722
ENSMUSG00000041670.20_22498818_22525686_1	chr1	-	1097	11	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	48	140358	48	-140172	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGCAAAGAACCACACATC	NA	NA	NA	NA	NA	NA	NA	NA	22525686	22498817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22498873_22503022_22503095_22504097_22504252_22504353_22504526_22507271_22507403_22511805_22511919_22514768_22514816_22518515_22518640_22522234_22522335_22523722_22523834_22525668
ENSMUSG00000041670.20_22503064_22548389_1	chr1	-	1105	11	ISM	ENSMUSG00000041670.20	ENST00000425662.6	2687	22	36	144589	36	-144418	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTATGAGGTTGATGATG	NA	NA	NA	NA	NA	NA	NA	NA	22548389	22503063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_22503095_22504097_22504252_22504353_22504526_22507271_22507403_22511805_22511919_22514768_22514816_22518515_22518640_22522234_22522335_22523722_22523834_22525668_22525734_22548332
ENSMUSG00000041671.14_142294280_142307879_1	chr6	+	1461	10	ISM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	2900	1104	2900	-1104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGTTTAATGACTCATT	NA	NA	NA	NA	NA	NA	NA	NA	142294279	142307879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
ENSMUSG00000041671.14_142296884_142308054_1	chr6	+	1451	9	ISM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	5504	929	5504	-929	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGCTGAGGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	142296883	142308054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
ENSMUSG00000041671.14_142300426_142308238_1	chr6	+	1453	7	ISM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	9046	745	9046	-745	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTATGTGGACTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	142300425	142308238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
ENSMUSG00000041671.14_142302244_142308366_1	chr6	+	1460	6	ISM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	10864	617	10864	-617	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAATTATAGCAGATTA	NA	NA	NA	NA	NA	NA	NA	NA	142302243	142308366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
ENSMUSG00000041671.14_142304204_142308657_1	chr6	+	1473	4	ISM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	12824	326	12824	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTCTCAGAACCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	142304203	142308657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_142304238_142304761_142304885_142306584_142306723_142307479
ENSMUSG00000041671.14_142306665_142308873_1	chr6	+	1452	2	ISM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	15285	110	15285	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTCGGAAGACAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	142306664	142308873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_142306723_142307479
ENSMUSG00000041679.10_106039464_106041745_1	chr8	-	514	4	ISM	ENSMUSG00000041679.10	ENST00000637079.1	1628	5	8255	55	8255	-55	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGCATCCAGTCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	106041745	106039463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106039578_106039676_106039895_106040052_106040197_106041707
ENSMUSG00000041679.10_106039520_106041795_1	chr8	-	508	4	ISM	ENSMUSG00000041679.10	ENST00000637079.1	1628	5	8205	111	8205	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTGGTATCAACATGGC	NA	NA	NA	NA	NA	NA	NA	NA	106041795	106039519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106039578_106039676_106039895_106040052_106040197_106041707
ENSMUSG00000041679.10_106039557_106041863_1	chr8	-	539	4	ISM	ENSMUSG00000041679.10	ENST00000637079.1	1628	5	8137	148	8137	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGCAAGCAGCTTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	106041863	106039556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106039578_106039676_106039895_106040052_106040197_106041707
ENSMUSG00000041679.10_106039792_106041987_1	chr8	-	527	3	ISM	ENSMUSG00000041679.10	ENST00000637079.1	1628	5	8013	383	8013	-383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGACATTGAGTCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	106041987	106039791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106039895_106040052_106040197_106041707
ENSMUSG00000041679.10_106039848_106042033_1	chr8	-	517	3	ISM	ENSMUSG00000041679.10	ENST00000637079.1	1628	5	7967	439	7967	-439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTCACAGACACGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	106042033	106039847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106039895_106040052_106040197_106041707
ENSMUSG00000041679.10_106040115_106042143_1	chr8	-	518	2	ISM	ENSMUSG00000041679.10	ENST00000637079.1	1628	5	7857	706	7857	-706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCTGCAGGAGTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	106042143	106040114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106040197_106041707
ENSMUSG00000041679.10_106040170_106042190_1	chr8	-	510	2	ISM	ENSMUSG00000041679.10	ENST00000637079.1	1628	5	7810	761	7810	-761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACCCTCAGGAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	106042190	106040169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106040197_106041707
ENSMUSG00000041679.10_106042143_106049912_1	chr8	-	574	2	ISM	ENSMUSG00000041679.10	ENST00000637079.1	1628	5	88	2734	88	274	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCCCTAGACCTCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	106049912	106042142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106042701_106049896
ENSMUSG00000041679.10_106042241_106049952_1	chr8	-	516	2	ISM	ENSMUSG00000041679.10	ENST00000637079.1	1628	5	48	2832	48	176	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAACCTGGGGCTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	106049952	106042240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_106042701_106049896
ENSMUSG00000041679.10_106042555_106049923_1	chr8	-	236	2	FSM	ENSMUSG00000041679.10	ENST00000485549.1	451	2	77	138	77	-138	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGGCCCACACCTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	106049923	106042554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_106042764_106049896
ENSMUSG00000041684.12_44159128_44183677_1	chr1	+	3317	10	FSM	ENSMUSG00000041684.12	ENSMUST00000114709.3	3570	10	0	253	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATGAATTTTAATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	44159127	44183677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ENSMUSG00000041684.12_44165424_44168524_1	chr1	+	931	4	ISM	ENSMUSG00000041684.12	ENST00000257336.6	2634	10	7	15153	7	-15146	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGAGCTGCCACTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	44165423	44168524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44166027_44166797_44166925_44167887_44167984_44168419
ENSMUSG00000041684.12_44165424_44183930_1	chr1	+	3265	9	ISM	ENSMUSG00000041684.12	ENST00000257336.6	2634	10	7	-253	7	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTTTGTGGTTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	44165423	44183930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ENSMUSG00000041684.12_44168815_44182586_1	chr1	+	918	5	ISM	ENSMUSG00000041684.12	ENST00000257336.6	2634	10	3398	1091	3398	-1084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACACAAATGCATTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	44168814	44182586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ENSMUSG00000041684.12_44176231_44183042_1	chr1	+	879	5	ISM	ENSMUSG00000041684.12	ENST00000257336.6	2634	10	10814	635	10814	-628	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATCCAAAGTTTCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	44176230	44183042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44176277_44177732_44177820_44180937_44181035_44182008_44182637_44183021
ENSMUSG00000041684.12_44182040_44183300_1	chr1	+	881	2	NNC	ENSMUSG00000041684.12	novel	3570	10	NA	NA	16623	-370	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGCTGCCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	44182039	44183300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_44182632_44183011
ENSMUSG00000041684.12_44182109_44183370_1	chr1	+	882	2	NNC	ENSMUSG00000041684.12	novel	3570	10	NA	NA	16692	-300	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGATTCAAATCAGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	44182108	44183370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_44182632_44183011
ENSMUSG00000041684.12_44182124_44183377_1	chr1	+	869	2	ISM	ENSMUSG00000041684.12	ENST00000257336.6	2634	10	16707	300	16707	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATCAGTAACTTGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	44182123	44183377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44182637_44183021
ENSMUSG00000041684.12_44182164_44183430_1	chr1	+	887	2	NNC	ENSMUSG00000041684.12	novel	3570	10	NA	NA	16747	-240	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACCTCAAAGGGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44182163	44183430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_44182632_44183011
ENSMUSG00000041684.12_44182401_44183670_1	chr1	+	885	2	ISM	ENSMUSG00000041684.12	ENST00000257336.6	2634	10	16984	7	16984	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAATCCTATGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	44182400	44183670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44182637_44183021
ENSMUSG00000041696.15_65305816_65319393_1	chr9	+	1787	5	FSM	ENSMUSG00000041696.15	ENSMUST00000085453.6	2390	5	9	594	0	-594	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTATTTTACCAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	65305815	65319393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_65305950_65308200_65308258_65314858_65314933_65315591_65315783_65318062
ENSMUSG00000041696.15_65315633_65319653_1	chr9	+	1741	2	ISM	ENSMUSG00000041696.15	ENSMUST00000085453.6	2390	5	9826	334	9817	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACCCAGGGGCACATCCT	NA	NA	NA	NA	NA	NA	NA	NA	65315632	65319653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_65315783_65318062
ENSMUSG00000041697.9_115483847_115486663_1	chr5	-	179	2	ISM	ENSMUSG00000041697.9	ENSMUST00000040154.9	571	3	377	146	377	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	857	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCTGTGTGGACCACGA	NA	NA	NA	NA	NA	NA	NA	NA	115486663	115483846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115483986_115486623
ENSMUSG00000041697.9_115483913_115486698_1	chr5	-	148	2	ISM	ENSMUSG00000041697.9	ENSMUST00000040154.9	571	3	342	212	342	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGAGTAAAGAGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	115486698	115483912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115483986_115486623
ENSMUSG00000041697.9_115483949_115486763_1	chr5	-	177	2	ISM	ENSMUSG00000041697.9	ENSMUST00000040154.9	571	3	277	248	277	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1008	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCCTCATGTGAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	115486763	115483948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115483986_115486623
ENSMUSG00000041697.9_115486670_115486984_1	chr5	-	184	2	ISM	ENSMUSG00000041697.9	ENSMUST00000040154.9	571	3	56	2969	56	-2969	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	963	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACCCCCGTTCGTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	115486984	115486669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115486767_115486897
ENSMUSG00000041712.8_102724226_102734347_1	chr12	+	682	7	ISM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	0	9619	0	-9619	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATGGGCTGCTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	102724225	102734347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328
ENSMUSG00000041712.8_102729753_102736107_1	chr12	+	647	6	ISM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	5527	7859	5527	-7859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGGCAAGAACGACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	102729752	102736107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039
ENSMUSG00000041712.8_102734363_102742065_1	chr12	+	663	5	ISM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	10137	1901	10137	-1901	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGGTTCACGAAAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	102734362	102742065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
ENSMUSG00000041712.8_102734452_102742161_1	chr12	+	670	5	ISM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	10226	1805	10226	-1805	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCTGCAGGGTTTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	102734451	102742161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
ENSMUSG00000041712.8_102736132_102742465_1	chr12	+	646	3	ISM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	11906	1501	11906	-1501	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCAAGCCCGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	102736131	102742465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_102736203_102737477_102737540_102741952
ENSMUSG00000041716.8_102708775_102724116_1	chr12	-	1196	2	FSM	ENSMUSG00000041716.8	ENSMUST00000174651.2	2795	2	815	784	815	-784	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTATCAGAAGACTGATG	NA	NA	NA	NA	NA	NA	NA	NA	102724116	102708774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_102709654_102723799
ENSMUSG00000041716.8_102708866_102724176_1	chr12	-	1165	2	FSM	ENSMUSG00000041716.8	ENSMUST00000174651.2	2795	2	755	875	755	-875	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCATTACAGTTGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	102724176	102708865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_102709654_102723799
ENSMUSG00000041716.8_102709138_102724464_1	chr12	-	1181	2	FSM	ENSMUSG00000041716.8	ENSMUST00000174651.2	2795	2	467	1147	467	-1147	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATCCCTGAAATTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	102724464	102709137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_102709654_102723799
ENSMUSG00000041720.15_17099802_17120935_1	chr16	-	2023	19	ISM	ENSMUSG00000041720.15	ENST00000255882.11	6339	55	102747	1370	373	676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGTGATGATTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	17120935	17099801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854
ENSMUSG00000041720.15_17100686_17125694_1	chr16	-	2064	18	ISM	ENSMUSG00000041720.15	ENST00000255882.11	6339	55	97988	2254	-4386	-208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCCTGGAACATGATG	NA	NA	NA	NA	NA	NA	NA	NA	17125694	17100685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566
ENSMUSG00000041720.15_17101202_17117384_1	chr16	-	496	6	ISM	ENSMUSG00000041720.15	ENST00000611748.1	1237	11	3924	724	3924	-724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGCCATCTTCAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	17117384	17101201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17117305
ENSMUSG00000041720.15_17104534_17121006_1	chr16	-	500	4	ISM	ENSMUSG00000041720.15	ENST00000611748.1	1237	11	302	4056	302	-4056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCAGCCATCATCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	17121006	17104533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17104646_17117305_17117434_17118856_17118965_17120854
ENSMUSG00000041720.15_17104547_17133478_1	chr16	-	2038	17	ISM	ENSMUSG00000041720.15	ENST00000255882.11	6339	55	90204	6115	-12170	-4069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGATCACAAACGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	17133478	17104546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412
ENSMUSG00000041720.15_17117354_17168696_1	chr16	-	2034	19	ISM	ENSMUSG00000041720.15	ENST00000255882.11	6339	55	54986	18922	-47388	-16876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCTCAGATAAGAAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	17168696	17117353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625
ENSMUSG00000041720.15_17136186_17185363_1	chr16	-	2036	18	ISM	ENSMUSG00000041720.15	ENST00000255882.11	6339	55	38319	37754	38319	-35708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGAGTAGCTGACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	17185363	17136185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267
ENSMUSG00000041720.15_17142998_17194925_1	chr16	-	2042	17	ISM	ENSMUSG00000041720.15	ENST00000255882.11	6339	55	28757	44566	28757	-42520	internal_fragment	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCGGCTGGAGTACATGA	NA	NA	NA	NA	NA	NA	NA	NA	17194925	17142997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191276_17194776
ENSMUSG00000041720.15_17170661_17223639_1	chr16	-	2035	17	ISM	ENSMUSG00000041720.15	ENST00000255882.11	6339	55	43	72229	43	-70183	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGGCCAGTTCAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	17223639	17170660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191276_17194776_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ENSMUSG00000041729.16_62326774_62338748_1	chr9	-	2750	8	ISM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	105578	0	105578	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTATCAAGCCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	62338748	62326773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583
ENSMUSG00000041729.16_62327085_62361903_1	chr9	-	2682	10	ISM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	82423	311	82423	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATCTGCTATACATAGGA	NA	NA	NA	NA	NA	NA	NA	NA	62361903	62327084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810
ENSMUSG00000041729.16_62327264_62396675_1	chr9	-	2680	11	ISM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	47651	490	47651	-490	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCCCTCTGCACGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	62396675	62327263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522
ENSMUSG00000041729.16_62327384_62444020_1	chr9	-	2694	12	FSM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	306	610	306	-610	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAGGATGACCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	62444020	62327383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
ENSMUSG00000041729.16_62327487_62444242_1	chr9	-	2813	12	FSM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	84	713	84	-713	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAGAGCAAGATGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	62444242	62327486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
ENSMUSG00000041729.16_62327565_62444242_1	chr9	-	2735	12	FSM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	84	791	84	-791	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGGGGCTCCATCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	62444242	62327564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
ENSMUSG00000041733.11_115417725_115433836_1	chr5	+	929	6	ISM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	0	1195	0	-1195	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAAAGCTTTAAAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	115417724	115433836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724
ENSMUSG00000041733.11_115417879_115434051_1	chr5	+	903	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	154	980	154	-980	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCATTTCTACTGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	115417878	115434051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
ENSMUSG00000041733.11_115421707_115434162_1	chr5	+	837	6	ISM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	3982	869	3982	-869	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGGCTGCTGAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	115421706	115434162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
ENSMUSG00000041733.11_115421707_115434219_1	chr5	+	894	6	ISM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	3982	812	3982	-812	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTAGAGGCTTAGCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	115421706	115434219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
ENSMUSG00000041733.11_115422447_115434369_1	chr5	+	979	5	ISM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	4722	662	4722	-662	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAGATTGGAATCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	115422446	115434369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
ENSMUSG00000041733.11_115429023_115434523_1	chr5	+	878	4	ISM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	11298	508	11298	-508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGTAGGAACCTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	115429022	115434523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115429100_115432885_115432975_115433724_115433837_115433923
ENSMUSG00000041733.11_115432915_115434626_1	chr5	+	875	3	ISM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	15190	405	15190	-405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACACGGTGTCTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	115432914	115434626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115432975_115433724_115433837_115433923
ENSMUSG00000041733.11_115432925_115434721_1	chr5	+	960	3	ISM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	15200	310	15200	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGTTAAATAAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	115432924	115434721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115432975_115433724_115433837_115433923
ENSMUSG00000041740.17_115379838_115383971_1	chr5	-	665	5	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	26501	0	26501	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTTGAGCCGCCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	115383971	115379837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907
ENSMUSG00000041740.17_115380036_115385000_1	chr5	-	621	6	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	25472	198	25472	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCGCCTTCTCCATCG	NA	NA	NA	NA	NA	NA	NA	NA	115385000	115380035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938
ENSMUSG00000041740.17_115380452_115385345_1	chr5	-	694	6	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	25127	614	25127	-614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGCGGGAAACTCACT	NA	NA	NA	NA	NA	NA	NA	NA	115385345	115380451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227
ENSMUSG00000041740.17_115380577_115386683_1	chr5	-	612	7	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	23789	739	23789	-739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGATGGGGAGAGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	115386683	115380576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640
ENSMUSG00000041740.17_115382120_115387020_1	chr5	-	618	6	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	23452	2282	23452	-2282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTGGAAGACGACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	115387020	115382119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973
ENSMUSG00000041740.17_115383980_115387147_1	chr5	-	612	5	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	23325	4142	23325	-4142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCACCAGCACTGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	115387147	115383979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973
ENSMUSG00000041740.17_115384028_115387207_1	chr5	-	624	5	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	23265	4190	23265	-4190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCCGGCCTTCAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	115387207	115384027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973
ENSMUSG00000041740.17_115386752_115388191_1	chr5	-	583	4	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	22281	6914	22281	-6914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCACCCTGTCAACGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	115388191	115386751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115386775_115386973_115387245_115387455_115387582_115388028
ENSMUSG00000041740.17_115387134_115389415_1	chr5	-	615	5	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	21057	7296	21057	-7296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGCAGTGTCTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	115389415	115387133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115387245_115387455_115387582_115388028_115388190_115389124_115389262_115389335
ENSMUSG00000041740.17_115387169_115389185_1	chr5	-	409	4	ISM	ENSMUSG00000041740.17	ENSMUST00000040555.15	3106	17	21766	7340	21287	-7331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGTCCTCTTGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	115389185	115387168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115387230_115387455_115387582_115388028_115388190_115389124
ENSMUSG00000041740.17_115387195_115389464_1	chr5	-	603	5	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	21008	7357	21008	-7357	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCACAAGTTTGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	115389464	115387194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115387245_115387455_115387582_115388028_115388190_115389124_115389262_115389335
ENSMUSG00000041740.17_115388030_115395056_1	chr5	-	597	5	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	15416	8192	15416	-8192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAATAGATGGGAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	115395056	115388029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032
ENSMUSG00000041740.17_115388081_115395126_1	chr5	-	616	5	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	15346	8243	15346	-8243	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACACTCCTGAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	115395126	115388080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032
ENSMUSG00000041740.17_115388135_115395181_1	chr5	-	617	5	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	15291	8297	15291	-8297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCGGGTAGTTCTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	115395181	115388134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032
ENSMUSG00000041740.17_115389154_115398285_1	chr5	-	692	5	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	12187	9316	12187	-9316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTAGACCATCCTATTA	NA	NA	NA	NA	NA	NA	NA	NA	115398285	115389153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177
ENSMUSG00000041740.17_115389232_115398303_1	chr5	-	632	5	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	12169	9394	12169	-9394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGGGACACCATTACCA	NA	NA	NA	NA	NA	NA	NA	NA	115398303	115389231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177
ENSMUSG00000041740.17_115398274_115410610_1	chr5	-	396	2	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	-138	18436	-138	-18436	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAAGCAAAACTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	115410610	115398273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115398375_115410315
ENSMUSG00000041740.17_115398340_115410655_1	chr5	-	375	2	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	-183	18502	-183	-18502	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAAGCGTGAACCCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	115410655	115398339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115398375_115410315
ENSMUSG00000041747.4_98385616_98393715_1	chr13	-	1042	8	ISM	ENSMUSG00000041747.4	ENST00000508491.1	1510	12	3758	-118	3758	118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGAGAAGAAGGCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	98393715	98385615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608
ENSMUSG00000041747.4_98385734_98397384_1	chr13	-	1421	12	FSM	ENSMUSG00000041747.4	ENST00000508491.1	1510	12	89	0	89	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGCGACCCTGTGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	98397384	98385733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395918_98397306
ENSMUSG00000041747.4_98385734_98397460_1	chr13	-	1497	12	FSM	ENSMUSG00000041747.4	ENST00000508491.1	1510	12	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGCGACCCTGTGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	98397460	98385733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395918_98397306
ENSMUSG00000041747.4_98391426_98399521_1	chr13	-	1031	7	ISM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	28	8073	28	-5692	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTTTAGTTTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	98399521	98391425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ENSMUSG00000041757.18_133187824_133200255_1	chr1	+	802	6	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	44	29127	44	-28699	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGACCAGGGAGCACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	133187823	133200255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197797_133197941_133199946
ENSMUSG00000041757.18_133187878_133200308_1	chr1	+	801	6	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	98	29074	98	-28646	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGAGCTTTCCACCACGT	NA	NA	NA	NA	NA	NA	NA	NA	133187877	133200308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197797_133197941_133199946
ENSMUSG00000041757.18_133191534_133200429_1	chr1	+	906	5	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	3754	28953	3754	-28525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGGCCTAGGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	133191533	133200429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133191640_133192398_133192472_133194303_133194405_133197797_133197941_133199946
ENSMUSG00000041757.18_133192439_133201658_1	chr1	+	823	5	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	4659	27724	4659	-27296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCTGATGATTACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	133192438	133201658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133192472_133194303_133194405_133197797_133197941_133199946_133200430_133201595
ENSMUSG00000041757.18_133194332_133201702_1	chr1	+	806	4	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	6552	27680	6552	-27252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATCTGCTCCATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	133194331	133201702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133194405_133197797_133197941_133199946_133200430_133201595
ENSMUSG00000041757.18_133197871_133201862_1	chr1	+	820	3	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	10091	27520	10091	-27092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCTCCCGACAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	133197870	133201862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133197941_133199946_133200430_133201595
ENSMUSG00000041757.18_133199955_133202012_1	chr1	+	892	2	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	12175	27370	12175	-26942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCTAGCGCCCGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	133199954	133202012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133200430_133201595
ENSMUSG00000041757.18_133200180_133202600_1	chr1	+	837	3	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	12400	26782	12400	-26354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTCCACGATAAGATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	133200179	133202600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133200430_133201595_133202113_133202530
ENSMUSG00000041757.18_133200410_133208112_1	chr1	+	795	6	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	12630	21270	12630	-20842	internal_fragment	TRUE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACCTTCAAGCTAAACGA	NA	NA	NA	NA	NA	NA	NA	NA	133200409	133208112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133200430_133201595_133202113_133202530_133202618_133203549_133203604_133207110_133207192_133208076
ENSMUSG00000041757.18_133201594_133209549_1	chr1	+	839	6	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	13814	19833	13814	-19405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGTAGTAAGGGAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	133201593	133209549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133202113_133202530_133202618_133203549_133203604_133207110_133207192_133208076_133208146_133209520
ENSMUSG00000041757.18_133201796_133209965_1	chr1	+	800	7	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	14016	19417	14016	-18989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATCAACATCCGGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	133201795	133209965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133202113_133202530_133202618_133203549_133203604_133207110_133207192_133208076_133208146_133209520_133209602_133209854
ENSMUSG00000041757.18_133201992_133213012_1	chr1	+	879	10	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	14212	16370	14212	-15942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAACAGCCCAGCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	133201991	133213012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133202113_133202530_133202618_133203549_133203604_133207110_133207192_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984
ENSMUSG00000041757.18_133202529_133213124_1	chr1	+	872	9	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	14749	16258	14749	-15830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCTGGGAAAACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	133202528	133213124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133202618_133203549_133203604_133207110_133207192_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984
ENSMUSG00000041757.18_133203562_133214080_1	chr1	+	867	9	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	15782	15302	15782	-14874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATACCCCAACTCCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	133203561	133214080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133203604_133207110_133207192_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133213984
ENSMUSG00000041757.18_133208093_133215237_1	chr1	+	812	8	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	20313	14145	20313	-13717	internal_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCGAGCCAGACATCACC	NA	NA	NA	NA	NA	NA	NA	NA	133208092	133215237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133213984_133214135_133215207
ENSMUSG00000041757.18_133209853_133215618_1	chr1	+	887	7	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	22073	13764	22073	-13336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGCCCACACTAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	133209852	133215618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133213984_133214135_133215207_133215338_133215511
ENSMUSG00000041757.18_133209974_133220142_1	chr1	+	813	8	NIC	ENSMUSG00000041757.18	novel	5477	25	NA	NA	22194	-8812	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGAGGAGCAGATGGACC	NA	NA	NA	NA	NA	NA	NA	NA	133209973	133220142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133213984_133214135_133215207_133215338_133215511_133215619_133220095
ENSMUSG00000041757.18_133212696_133221480_1	chr1	+	769	7	NIC	ENSMUSG00000041757.18	novel	5477	25	NA	NA	24916	-7474	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCTGGAGGCAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	133212695	133221480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_133212730_133212984_133213125_133213984_133214135_133215207_133215338_133215511_133215619_133220095_133220267_133221443
ENSMUSG00000041757.18_133213072_133221721_1	chr1	+	809	7	NIC	ENSMUSG00000041757.18	novel	5477	25	NA	NA	25292	-7233	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGGTACATTGACCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	133213071	133221721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_133213125_133213984_133214135_133215207_133215338_133215511_133215619_133220095_133220267_133221443_133221612_133221691
ENSMUSG00000041757.18_133213983_133221825_1	chr1	+	862	6	NIC	ENSMUSG00000041757.18	novel	5477	25	NA	NA	26203	-7129	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATAGGCCTAGGCGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	133213982	133221825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_133214135_133215207_133215338_133215511_133215619_133220095_133220267_133221443_133221612_133221691
ENSMUSG00000041757.18_133214085_133222346_1	chr1	+	806	7	NIC	ENSMUSG00000041757.18	novel	5477	25	NA	NA	26305	-6608	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAGGACTCAGAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	133214084	133222346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_133214135_133215207_133215338_133215511_133215619_133220095_133220267_133221443_133221612_133221691_133221826_133222300
ENSMUSG00000041757.18_133215284_133226675_1	chr1	+	801	7	ISM	ENSMUSG00000041757.18	ENSMUST00000187285.7	5040	23	106225	2282	27504	-2279	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCCACCTCCCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	133215283	133226675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133215338_133215511_133215619_133220092_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657
ENSMUSG00000041757.18_133220104_133227528_1	chr1	+	817	6	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	32324	1854	32324	-1426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCACCCTGGCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	133220103	133227528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ENSMUSG00000041757.18_133220164_133227570_1	chr1	+	799	6	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	32384	1812	32384	-1384	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTCAGAGAGCCAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	133220163	133227570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ENSMUSG00000041757.18_133220216_133227620_1	chr1	+	797	6	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	32436	1762	32436	-1334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTTCAAGTTCACATCT	NA	NA	NA	NA	NA	NA	NA	NA	133220215	133227620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ENSMUSG00000041757.18_133221535_133227776_1	chr1	+	811	5	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	33755	1606	33755	-1178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCTGCACCATCCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	133221534	133227776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ENSMUSG00000041757.18_133221719_133227889_1	chr1	+	820	4	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	33939	1493	33939	-1065	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGAGGCCAGGTCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	133221718	133227889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133221826_133222300_133222447_133226657_133226782_133227446
ENSMUSG00000041757.18_133221784_133227925_1	chr1	+	791	4	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	34004	1457	34004	-1029	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCCCAGCTGCCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	133221783	133227925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133221826_133222300_133222447_133226657_133226782_133227446
ENSMUSG00000041757.18_133222394_133228063_1	chr1	+	794	3	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	34614	1319	34614	-891	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGTCAAGTGTGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	133222393	133228063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133222447_133226657_133226782_133227446
ENSMUSG00000041757.18_133226746_133228214_1	chr1	+	804	2	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	38966	1168	38966	-740	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGGGAAATGGGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	133226745	133228214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_133226782_133227446
ENSMUSG00000041763.15_43973205_44011807_1	chr1	+	1840	14	ISM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	38	30324	30	-30324	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCCCAGGGGCTTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	43973204	44011807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689
ENSMUSG00000041763.15_43988487_44016512_1	chr1	+	1857	15	ISM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	15320	25619	15312	-25619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTTGGTAAGTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	43988486	44016512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366
ENSMUSG00000041763.15_43990295_44017646_1	chr1	+	1831	15	ISM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	17128	24485	17120	-24485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTCCATGGGATAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	43990294	44017646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572
ENSMUSG00000041763.15_43992463_44017963_1	chr1	+	1820	15	ISM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	19296	24168	19288	-24168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTTGAAGAGCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	43992462	44017963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894
ENSMUSG00000041763.15_43993735_44019564_1	chr1	+	1872	15	ISM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	20568	22567	20560	-22567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGTTTTCTAGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	43993734	44019564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467
ENSMUSG00000041763.15_43995629_44020984_1	chr1	+	1803	15	ISM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	22462	21147	22454	-21147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAAAGACAGATGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	43995628	44020984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889
ENSMUSG00000041763.15_44008130_44030484_1	chr1	+	1834	15	ISM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	34955	11676	34955	-11647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGCACGTCTTCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	44008129	44030484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422
ENSMUSG00000041763.15_44009604_44031496_1	chr1	+	1838	15	ISM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	36429	10664	36429	-10635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGTTTACATTGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	44009603	44031496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423
ENSMUSG00000041763.15_44011777_44040549_1	chr1	+	1846	15	ISM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	38602	1611	38602	-1582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTCGTAGAAGAAAAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	44011776	44040549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478
ENSMUSG00000041763.15_44014596_44041356_1	chr1	+	1820	14	ISM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	41421	804	41421	-775	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACCAAAACTTTACATT	NA	NA	NA	NA	NA	NA	NA	NA	44014595	44041356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ENSMUSG00000041763.15_44017928_44041749_1	chr1	+	1821	11	ISM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	44753	411	44753	-382	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCTACATTAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44017927	44041749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ENSMUSG00000041763.15_44019481_44041856_1	chr1	+	1847	10	ISM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	46306	304	46306	-275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGGCATAAACAAATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	44019480	44041856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ENSMUSG00000041763.15_44020944_44041984_1	chr1	+	1837	9	ISM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	47769	176	47769	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGTGACAGACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	44020943	44041984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ENSMUSG00000041765.7_122116032_122257768_1	chr14	+	1461	9	FSM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	0	678	0	-678	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAGCTCGAGTGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	122116031	122257768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ENSMUSG00000041765.7_122116074_122257827_1	chr14	+	1478	9	FSM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	42	619	42	-619	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAGAAAGGCTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	122116073	122257827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ENSMUSG00000041765.7_122116074_122257880_1	chr14	+	1531	9	FSM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	42	566	42	-566	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGTATTCACATCTC	NA	NA	NA	NA	NA	NA	NA	NA	122116073	122257880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ENSMUSG00000041765.7_122220678_122258447_1	chr14	+	1505	4	ISM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	104646	-1	104646	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAGTAGTTTTTATAC	NA	NA	NA	NA	NA	NA	NA	NA	122220677	122258447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_122220728_122231636_122231883_122246202_122246326_122257361
ENSMUSG00000041774.17_16962677_16969149_1	chr16	+	1521	8	FSM	ENSMUSG00000041774.17	ENSMUST00000231726.2	1713	8	192	0	192	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTTACTCAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	16962676	16969149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_16962803_16963071_16963246_16963825_16963944_16964830_16965011_16965096_16965257_16965461_16965562_16965660_16965839_16968664
ENSMUSG00000041774.17_16965208_16966298_1	chr16	+	606	4	ISM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	365	412	365	-412	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCATTGATGACCTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	16965207	16966298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16965257_16965461_16965562_16965660_16965839_16966019
ENSMUSG00000041774.17_16965709_16966511_1	chr16	+	622	2	ISM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	866	199	866	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGTCCTCTAGGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	16965708	16966511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16965839_16966019
ENSMUSG00000041777.13_73114935_73134105_1	chr2	-	660	4	ISM	ENSMUSG00000041777.13	ENSMUST00000058615.10	2821	10	8940	1486	8940	-1486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACCGGCACAGTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	73134105	73114934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083
ENSMUSG00000041777.13_73115004_73134163_1	chr2	-	649	4	ISM	ENSMUSG00000041777.13	ENSMUST00000058615.10	2821	10	8882	1555	8882	-1555	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCAAAACAAGAGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	73134163	73115003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083
ENSMUSG00000041777.13_73115130_73136669_1	chr2	-	659	6	ISM	ENSMUSG00000041777.13	ENSMUST00000058615.10	2821	10	6376	1681	6376	-1681	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGAAAACCAAATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	73136669	73115129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73136283_73136620
ENSMUSG00000041777.13_73117982_73142911_1	chr2	-	630	7	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	134	-4533	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTTGACCGCAAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	73142911	73117981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_73118060_73134083_73134202_73136233_73136283_73136620_73136686_73137198_73137273_73140800_73140896_73142760
ENSMUSG00000041777.13_73134083_73143045_1	chr2	-	687	6	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	0	-20634	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGCATTAGACAAAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	73143045	73134082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_73134202_73136233_73136283_73136620_73136686_73137198_73137273_73140800_73140896_73142760
ENSMUSG00000041779.6_21071778_21076434_1	chr1	-	627	6	ISM	ENSMUSG00000041779.6	ENST00000182527.4	1467	12	73021	1351	73019	-1351	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAGAACAGGGATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	21076434	21071777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373
ENSMUSG00000041779.6_21071821_21077109_1	chr1	-	641	7	ISM	ENSMUSG00000041779.6	ENST00000182527.4	1467	12	72346	1394	72344	-1394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCCTCACGGACTAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	21077109	21071820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076
ENSMUSG00000041779.6_21073279_21083085_1	chr1	-	612	7	ISM	ENSMUSG00000041779.6	ENST00000182527.4	1467	12	66370	2852	66368	-2852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGAGTATTGGAAGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	21083085	21073278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016
ENSMUSG00000041779.6_21073341_21083692_1	chr1	-	665	8	ISM	ENSMUSG00000041779.6	ENST00000182527.4	1467	12	65763	2914	65761	-2914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGTGTCGCCCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	21083692	21073340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625
ENSMUSG00000041779.6_21074061_21083735_1	chr1	-	692	7	ISM	ENSMUSG00000041779.6	ENST00000182527.4	1467	12	65720	3634	65718	-3634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCAGAAGTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	21083735	21074060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625
ENSMUSG00000041779.6_21074537_21149267_1	chr1	-	574	8	ISM	ENSMUSG00000041779.6	ENST00000182527.4	1467	12	188	4110	186	-4110	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGCTACTACTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	21149267	21074536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
ENSMUSG00000041781.10_101942247_101956238_1	chr12	+	1220	8	ISM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	0	16445	0	-16445	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACCCTAAAAACTCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	101942246	101956238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047
ENSMUSG00000041781.10_101948216_101963153_1	chr12	+	1206	8	ISM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	5969	9530	5969	-9530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAAACTGGAGCAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	101948215	101963153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077
ENSMUSG00000041781.10_101949435_101963668_1	chr12	+	1247	8	ISM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	7188	9015	7188	-9015	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCAGAGGAAAGAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	101949434	101963668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513
ENSMUSG00000041781.10_101951515_101964948_1	chr12	+	1145	7	ISM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	9268	7735	9268	-7735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGCCTTGGTGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	101951514	101964948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795
ENSMUSG00000041781.10_101953555_101965764_1	chr12	+	1145	7	ISM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	11308	6919	11308	-6919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCCGTGCGTTTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	101953554	101965764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631
ENSMUSG00000041781.10_101954999_101967042_1	chr12	+	1160	7	ISM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	12752	5641	12752	-5641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGGGAGTTATTTTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	101954998	101967042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935
ENSMUSG00000041781.10_101963116_101969457_1	chr12	+	1148	7	ISM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	20869	3226	20869	-3226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACAGTATGCCATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	101963115	101969457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ENSMUSG00000041781.10_101963544_101969564_1	chr12	+	1162	6	ISM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	21297	3119	21297	-3119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGTAACATACAAAAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	101963543	101969564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ENSMUSG00000041781.10_101964898_101969827_1	chr12	+	1152	5	ISM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	22651	2856	22651	-2856	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTTGTTCCAAGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	101964897	101969827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ENSMUSG00000041781.10_101965779_101970059_1	chr12	+	1186	4	ISM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	23532	2624	23532	-2624	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTGCGGCTGCTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	101965778	101970059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_101965858_101966935_101967236_101968886_101969022_101969387
ENSMUSG00000041781.10_101967069_101970249_1	chr12	+	1164	3	ISM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	24822	2434	24822	-2434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGCTGAGTGTGGTACGT	NA	NA	NA	NA	NA	NA	NA	NA	101967068	101970249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_101967236_101968886_101969022_101969387
ENSMUSG00000041781.10_101968885_101970383_1	chr12	+	1133	2	ISM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	26638	2300	26638	-2300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGGTCTGTACATATTT	NA	NA	NA	NA	NA	NA	NA	NA	101968884	101970383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_101969022_101969387
ENSMUSG00000041781.10_101968998_101970514_1	chr12	+	1151	2	ISM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	26751	2169	26751	-2169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAATTAAAGGTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	101968997	101970514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_101969022_101969387
ENSMUSG00000041794.14_120164743_120261549_1	chr9	+	1115	9	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	47	40656	47	-40656	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACGTCTGCCTATGATGA	NA	NA	NA	NA	NA	NA	NA	NA	120164742	120261549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120164807_120217177_120217400_120246205_120246343_120248716_120248798_120251245_120251344_120251526_120251608_120253657_120253805_120256573_120256728_120261418
ENSMUSG00000041794.14_120164779_120261598_1	chr9	+	1128	9	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	83	40607	83	-40607	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAGCGAAGCCTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	120164778	120261598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120164807_120217177_120217400_120246205_120246343_120248716_120248798_120251245_120251344_120251526_120251608_120253657_120253805_120256573_120256728_120261418
ENSMUSG00000041794.14_120246203_120261755_1	chr9	+	1038	7	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	81507	40450	81507	-40450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGCTCATCTCGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	120246202	120261755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120246343_120248716_120248798_120251245_120251344_120251526_120251608_120253657_120253805_120256573_120256728_120261418
ENSMUSG00000041794.14_120246205_120261859_1	chr9	+	1140	7	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	81509	40346	81509	-40346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACGTCAATTTCAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	120246204	120261859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120246343_120248716_120248798_120251245_120251344_120251526_120251608_120253657_120253805_120256573_120256728_120261418
ENSMUSG00000041794.14_120246281_120261886_1	chr9	+	1091	7	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	81585	40319	81585	-40319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTGGAGAGACTTCCGAC	NA	NA	NA	NA	NA	NA	NA	NA	120246280	120261886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120246343_120248716_120248798_120251245_120251344_120251526_120251608_120253657_120253805_120256573_120256728_120261418
ENSMUSG00000041794.14_120248713_120262044_1	chr9	+	1191	6	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	84017	40161	84017	-40161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAGAAACCCGCAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	120248712	120262044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120248798_120251245_120251344_120251526_120251608_120253657_120253805_120256573_120256728_120261418
ENSMUSG00000041794.14_120251305_120270457_1	chr9	+	1097	6	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	86609	31748	86609	-31748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTCCAGCACGGACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	120251304	120270457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120251344_120251526_120251608_120253657_120253805_120256573_120256728_120261418_120262045_120270407
ENSMUSG00000041794.14_120253657_120270647_1	chr9	+	1168	4	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	88961	31558	88961	-31558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGCCAGGAGACACCT	NA	NA	NA	NA	NA	NA	NA	NA	120253656	120270647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120253805_120256573_120256728_120261418_120262045_120270407
ENSMUSG00000041794.14_120253768_120290511_1	chr9	+	1095	5	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	89072	11694	89072	-11694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTGAGTGAGCTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	120253767	120290511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120253805_120256573_120256728_120261418_120262045_120270407_120270648_120290473
ENSMUSG00000041794.14_120256573_120290635_1	chr9	+	1183	4	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	91877	11570	91877	-11570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCCCCCTCCTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	120256572	120290635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120256728_120261418_120262045_120270407_120270648_120290473
ENSMUSG00000041794.14_120256676_120293794_1	chr9	+	1115	5	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	91980	8411	91980	-8411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGCTGGCTTAAACATAG	NA	NA	NA	NA	NA	NA	NA	NA	120256675	120293794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120256728_120261418_120262045_120270407_120270648_120290473_120290636_120293759
ENSMUSG00000041794.14_120261415_120294027_1	chr9	+	1198	5	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	96719	8178	96719	-8178	internal_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTTGCACTTAAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	120261414	120294027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120262045_120270407_120270648_120290473_120290636_120293759_120293865_120293966
ENSMUSG00000041794.14_120261543_120296530_1	chr9	+	1089	6	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	96847	5675	96847	-5675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTGACCCCCATTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	120261542	120296530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120262045_120270407_120270648_120290473_120290636_120293759_120293865_120293966_120294028_120296511
ENSMUSG00000041794.14_120261599_120296585_1	chr9	+	1088	6	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	96903	5620	96903	-5620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAACAGGCCCACAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	120261598	120296585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120262045_120270407_120270648_120290473_120290636_120293759_120293865_120293966_120294028_120296511
ENSMUSG00000041794.14_120261655_120296631_1	chr9	+	1078	6	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	96959	5574	96959	-5574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAATCTCTGTGCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	120261654	120296631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120262045_120270407_120270648_120290473_120290636_120293759_120293865_120293966_120294028_120296511
ENSMUSG00000041794.14_120261808_120301929_1	chr9	+	1016	7	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	97112	276	97112	-276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCAACAGCCATCGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	120261807	120301929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120262045_120270407_120270648_120290473_120290636_120293759_120293865_120293966_120294028_120296511_120296631_120301837
ENSMUSG00000041794.14_120270405_120302205_1	chr9	+	1058	6	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	105709	0	105709	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCCCGTGTGTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	120270404	120302205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_120270648_120290473_120290636_120293759_120293865_120293966_120294028_120296511_120296631_120301837
ENSMUSG00000041798.16_5851569_5899647_1	chr11	-	1581	10	FSM	ENSMUSG00000041798.16	ENST00000671824.1	1605	10	125	-101	125	101	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGGAGAGGCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	5899647	5851568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_5851815_5852084_5852319_5853099_5853256_5854326_5854545_5856476_5856577_5856682_5856779_5859082_5859203_5860277_5860433_5860861_5861025_5899554
ENSMUSG00000041801.6_135694205_135696686_1	chr1	+	899	2	FSM	ENSMUSG00000041801.6	ENSMUST00000038945.6	1435	2	348	188	348	-188	multi-exon	FALSE	canonical	NA	NA	NA	NA	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGTCCTTTTGGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	135694204	135696686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_135694633_135696215
ENSMUSG00000041801.6_135694205_135696686_2	chr1	+	894	2	NNC	ENSMUSG00000041801.6	novel	1435	2	NA	NA	348	-188	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGTCCTTTTGGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	135694204	135696686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_135694628_135696215
ENSMUSG00000041801.6_135694397_135696874_1	chr1	+	890	2	NNC	ENSMUSG00000041801.6	novel	1435	2	NA	NA	540	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTACTGAGTGAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	135694396	135696874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_135694628_135696215
ENSMUSG00000041801.6_135694397_135696874_2	chr1	+	895	2	FSM	ENSMUSG00000041801.6	ENSMUST00000038945.6	1435	2	540	0	540	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTACTGAGTGAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	135694396	135696874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_135694633_135696215
ENSMUSG00000041801.6_135694397_135696874_3	chr1	+	892	2	NNC	ENSMUSG00000041801.6	novel	1435	2	NA	NA	540	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTACTGAGTGAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	135694396	135696874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_135694633_135696218
ENSMUSG00000041815.15_83011518_83013462_1	chr15	-	807	2	ISM	ENSMUSG00000041815.15	ENSMUST00000100375.11	3157	8	20070	1339	20070	-1339	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCTGGGACCTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	83013462	83011517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83012257_83013394
ENSMUSG00000041815.15_83011688_83016855_1	chr15	-	844	4	ISM	ENSMUSG00000041815.15	ENSMUST00000100375.11	3157	8	16677	1509	16677	-1509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTATGTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	83016855	83011687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777
ENSMUSG00000041815.15_83011795_83017424_1	chr15	-	814	5	ISM	ENSMUSG00000041815.15	ENSMUST00000100375.11	3157	8	16108	1616	16108	-1616	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGGTGCACTGTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	83017424	83011794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347
ENSMUSG00000041815.15_83011860_83017460_1	chr15	-	785	5	ISM	ENSMUSG00000041815.15	ENSMUST00000100375.11	3157	8	16072	1681	16072	-1681	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGTAGGCTGTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	83017460	83011859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347
ENSMUSG00000041815.15_83012123_83022367_1	chr15	-	807	8	ISM	ENSMUSG00000041815.15	ENSMUST00000058793.14	3299	9	11218	1946	11165	-1944	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGACCACACAACCCACA	NA	NA	NA	NA	NA	NA	NA	NA	83022367	83012122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332
ENSMUSG00000041815.15_83012189_83022425_1	chr15	-	799	8	ISM	ENSMUSG00000041815.15	ENSMUST00000058793.14	3299	9	11160	2012	11107	-2010	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCCTCCTGCCGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	83022425	83012188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332
ENSMUSG00000041815.15_83012222_83022502_1	chr15	-	843	8	ISM	ENSMUSG00000041815.15	ENSMUST00000058793.14	3299	9	11083	2045	11030	-2043	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGCTGCCACGGAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	83022502	83012221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332
ENSMUSG00000041815.15_83015716_83022608_1	chr15	-	813	6	ISM	ENSMUSG00000041815.15	ENSMUST00000058793.14	3299	9	10977	5539	10924	-5537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTTATAAGAAGTACAATAA	NA	NA	NA	NA	NA	NA	NA	NA	83022608	83015715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332
ENSMUSG00000041815.15_83016834_83033502_1	chr15	-	883	6	ISM	ENSMUSG00000041815.15	ENSMUST00000058793.14	3299	9	83	6657	30	-6655	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCAAGATGACCGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	83033502	83016833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
ENSMUSG00000041827.16_115061481_115075139_1	chr5	+	946	5	FSM	ENSMUSG00000041827.16	ENST00000339275.10	1377	5	128	303	-23	-303	multi-exon	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGCTCATCAGAAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	115061480	115075139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_115061669_115066081_115066365_115067898_115068063_115073979_115074128_115074976
ENSMUSG00000041827.16_115061494_115075189_1	chr5	+	983	5	FSM	ENSMUSG00000041827.16	ENST00000339275.10	1377	5	141	253	-10	-253	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCCACATCTGCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	115061493	115075189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_115061669_115066081_115066365_115067898_115068063_115073979_115074128_115074976
ENSMUSG00000041827.16_115061494_115075264_1	chr5	+	1058	5	FSM	ENSMUSG00000041827.16	ENST00000339275.10	1377	5	141	178	-10	-178	multi-exon	FALSE	canonical	NA	NA	NA	NA	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCCTATGCGATCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	115061493	115075264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_115061669_115066081_115066365_115067898_115068063_115073979_115074128_115074976
ENSMUSG00000041827.16_115061494_115075442_1	chr5	+	1478	6	FSM	ENSMUSG00000041827.16	ENSMUST00000112143.4	2181	6	171	532	-10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACGGAGGGGGCAGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	115061493	115075442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_115061669_115066081_115066365_115067898_115068063_115070781_115071024_115073979_115074128_115074976
ENSMUSG00000041827.16_115061494_115075442_2	chr5	+	1472	6	NNC	ENSMUSG00000041827.16	novel	2181	6	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACGGAGGGGGCAGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	115061493	115075442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_115061669_115066081_115066365_115067898_115068063_115070781_115071024_115073979_115074122_115074976
ENSMUSG00000041827.16_115066080_115075442_1	chr5	+	1061	4	NIC	ENSMUSG00000041827.16	novel	1466	6	NA	NA	4576	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACGGAGGGGGCAGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	115066079	115075442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_+_115066365_115067898_115068063_115073979_115074128_115074978
ENSMUSG00000041827.16_115066080_115075442_2	chr5	+	1063	4	ISM	ENSMUSG00000041827.16	ENST00000339275.10	1377	5	4727	0	4576	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACGGAGGGGGCAGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	115066079	115075442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_115066365_115067898_115068063_115073979_115074128_115074976
ENSMUSG00000041836.11_135253844_135255708_1	chr7	+	131	2	ISM	ENSMUSG00000041836.11	ENST00000471218.5	351	4	365	5121	178	-5121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGGTGAGATCTGCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	135253843	135255708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_135253893_135255626
ENSMUSG00000041840.9_77845421_77848642_1	chr18	-	255	5	ISM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	6838	153	6098	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGATGGGCCTGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	77848642	77845420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606
ENSMUSG00000041840.9_77847137_77854740_1	chr18	-	315	3	FSM	ENSMUSG00000041840.9	ENST00000585518.5	315	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGTTGCTATGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	77854740	77847136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_77847209_77848167_77848234_77854563
ENSMUSG00000041840.9_77847176_77849725_1	chr18	-	267	4	ISM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	5755	1908	5015	-39	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAGAAGAAGTTGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	77849725	77847175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_77847209_77848167_77848234_77848606_77848731_77849681
ENSMUSG00000041840.9_77848678_77851842_1	chr18	-	258	3	ISM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	3638	3410	2898	-1541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGCCTTCAGAATATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	77851842	77848677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_77848731_77849681_77849817_77851772
ENSMUSG00000041840.9_77849761_77854611_1	chr18	-	240	3	ISM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	869	4493	129	-2624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGAAGAAATGAAGCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	77854611	77849760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_77849817_77851772_77851909_77854563
ENSMUSG00000041840.9_77851803_77854712_1	chr18	-	255	2	ISM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	768	6535	28	-4666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGGAAATAAAAGATACTT	NA	NA	NA	NA	NA	NA	NA	NA	77854712	77851802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_77851909_77854563
ENSMUSG00000041841.9_5146768_5148623_1	chr15	+	797	3	ISM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	641	-1	641	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCATAGTCCGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	5146767	5148623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_5146905_5147100_5147186_5148048
ENSMUSG00000041845.12_4475487_4489460_1	chr19	-	1338	5	NNC	ENSMUSG00000041845.12	novel	1344	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACATTCAAAGAGCTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	4489460	4475486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4476285_4476654_4476790_4482082_4482187_4482795_4482884_4489247
ENSMUSG00000041845.12_4475695_4482192_1	chr19	-	882	3	ISM	ENSMUSG00000041845.12	ENSMUST00000235680.2	1151	5	7236	0	7190	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGTCCTGACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	4482192	4475694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4476285_4476607_4476790_4482082
ENSMUSG00000041845.12_4476654_4489266_1	chr19	-	155	2	ISM	ENSMUSG00000041845.12	ENST00000532559.1	417	3	116	516	116	-516	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTAGGAAGCTAGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	4489266	4476653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4476790_4489247
ENSMUSG00000041845.12_4476704_4489317_1	chr19	-	156	2	ISM	ENSMUSG00000041845.12	ENST00000532559.1	417	3	65	566	65	-566	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAACAACCTGCGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	4489317	4476703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4476790_4489247
ENSMUSG00000041846.16_101006458_101008173_1	chr12	-	671	2	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	41719	156	41719	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAACAGATTTGGAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	101008173	101006457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101007039_101008083
ENSMUSG00000041846.16_101006501_101008286_1	chr12	-	741	2	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	41606	199	41606	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTGCCTTTAAAATCATA	NA	NA	NA	NA	NA	NA	NA	NA	101008286	101006500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101007039_101008083
ENSMUSG00000041846.16_101006662_101008789_1	chr12	-	680	3	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	41103	360	41103	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACAGGGCAGGGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	101008789	101006661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101007039_101008083_101008311_101008713
ENSMUSG00000041846.16_101006810_101009804_1	chr12	-	750	4	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	40088	508	40088	-508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACACTGGACTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	101009804	101006809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701
ENSMUSG00000041846.16_101006853_101009809_1	chr12	-	712	4	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	40083	551	40083	-551	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAGTGCAGTGGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	101009809	101006852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701
ENSMUSG00000041846.16_101006985_101010800_1	chr12	-	667	5	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	39092	683	39092	-683	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAAGACAAGGAAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	101010800	101006984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748
ENSMUSG00000041846.16_101008714_101017665_1	chr12	-	736	5	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	32227	2412	32227	-2412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGTTGAAACAAAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	101017665	101008713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592
ENSMUSG00000041846.16_101008834_101017826_1	chr12	-	683	6	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	32066	2532	32066	-2532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTCAACACAGATGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	101017826	101008833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789
ENSMUSG00000041846.16_101009789_101019747_1	chr12	-	680	6	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	30145	3487	30145	-3487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGTAGATTATGTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	101019747	101009788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687
ENSMUSG00000041846.16_101010801_101021801_1	chr12	-	681	6	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	28091	4499	28091	-4499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAATCTGATGAACTCCG	NA	NA	NA	NA	NA	NA	NA	NA	101021801	101010800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788
ENSMUSG00000041846.16_101010858_101021847_1	chr12	-	670	6	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	28045	4556	28045	-4556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAAGTTTTTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	101021847	101010857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788
ENSMUSG00000041846.16_101015917_101022086_1	chr12	-	747	6	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	27806	9615	27806	-9615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCTTCTTAAAGGATTC	NA	NA	NA	NA	NA	NA	NA	NA	101022086	101015916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008
ENSMUSG00000041846.16_101017620_101049074_1	chr12	-	702	7	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	818	11318	818	-11318	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAACAGAAGACAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	101049074	101017619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101034895_101034952_101048987
ENSMUSG00000041846.16_101017679_101049176_1	chr12	-	745	7	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	716	11377	716	-11377	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGGGTTTCTTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	101049176	101017678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101034895_101034952_101048987
ENSMUSG00000041846.16_101019741_101049300_1	chr12	-	667	5	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	592	13439	592	-13439	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAATGATGATGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	101049300	101019740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101019844_101021788_101021906_101022008_101022087_101034895_101034952_101048987
ENSMUSG00000041846.16_101021801_101049463_1	chr12	-	715	4	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	429	15499	429	-15499	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCATCCTTGTAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	101049463	101021800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101021906_101022008_101022087_101034895_101034952_101048987
ENSMUSG00000041846.16_101021878_101049497_1	chr12	-	672	4	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	395	15576	395	-15576	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAAACGCTACAACCC	NA	NA	NA	NA	NA	NA	NA	NA	101049497	101021877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101021906_101022008_101022087_101034895_101034952_101048987
ENSMUSG00000041846.16_101024690_101049176_1	chr12	-	855	4	ISM	ENSMUSG00000041846.16	ENSMUST00000163095.9	4083	15	780	18516	716	-18388	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGATATGGTTCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	101049176	101024689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101025201_101031242_101031342_101034895_101034952_101048987
ENSMUSG00000041846.16_101024961_101049418_1	chr12	-	826	4	ISM	ENSMUSG00000041846.16	ENSMUST00000163095.9	4083	15	538	18787	474	-18659	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGGATTTGGAAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	101049418	101024960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_101025201_101031242_101031342_101034895_101034952_101048987
ENSMUSG00000041859.11_20873192_20884731_1	chr1	-	2157	12	ISM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	5805	0	3400	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1420	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTGTGTATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	20884731	20873191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622
ENSMUSG00000041859.11_20873389_20885045_1	chr1	-	2093	13	ISM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	5491	197	3086	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1727	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGGAAGCTTTGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	20885045	20873388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912
ENSMUSG00000041859.11_20873766_20882293_1	chr1	-	1070	9	ISM	ENSMUSG00000041859.11	ENST00000616552.4	2349	16	5838	86	5838	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAGAGGAAATCCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	20882293	20873765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_20873879_20875040_20875118_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188
ENSMUSG00000041859.11_20873776_20882299_1	chr1	-	1063	9	NNC	ENSMUSG00000041859.11	novel	2349	16	NA	NA	5832	-96	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGTTCTCCTCAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	20882299	20873775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_20873879_20875040_20875118_20875486_20875561_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188
ENSMUSG00000041859.11_20873778_20887675_1	chr1	-	2150	15	ISM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	2861	586	456	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2043	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCGTTCTCCTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	20887675	20873777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466
ENSMUSG00000041859.11_20875040_20888129_1	chr1	-	2163	15	ISM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	2407	1848	2	-1360	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCTTCCGGGGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	20888129	20875039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016
ENSMUSG00000041859.11_20875094_20882839_1	chr1	-	1060	9	ISM	ENSMUSG00000041859.11	ENST00000616552.4	2349	16	5292	1414	5292	-1414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTCTCAGGAGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	20882839	20875093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_20875118_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787
ENSMUSG00000041859.11_20875533_20890484_1	chr1	-	2155	15	ISM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	52	2341	52	-1853	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1771	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACCCTTACGACTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	20890484	20875532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ENSMUSG00000041879.14_135312211_135314544_1	chr1	-	1307	4	ISM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	43693	2161	43693	-2161	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	135314544	135312210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421
ENSMUSG00000041879.14_135312350_135315297_1	chr1	-	1354	5	ISM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	42940	2300	42940	-2300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTCTGCACATAACCAC	NA	NA	NA	NA	NA	NA	NA	NA	135315297	135312349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111
ENSMUSG00000041879.14_135312457_135316333_1	chr1	-	1280	6	ISM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	41904	2407	41904	-2407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGCCAGACAGACGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	135316333	135312456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248
ENSMUSG00000041879.14_135312657_135317148_1	chr1	-	1260	7	ISM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	41089	2607	41089	-2607	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGCCAGTGATGCTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	135317148	135312656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050
ENSMUSG00000041879.14_135312859_135318404_1	chr1	-	1365	8	ISM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	39833	2809	39833	-2809	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCATTCCTAGCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	135318404	135312858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275
ENSMUSG00000041879.14_135314026_135322077_1	chr1	-	1215	8	ISM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	36160	3976	36160	-3976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGAGGAGGAGGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	135322077	135314025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873
ENSMUSG00000041879.14_135314464_135327884_1	chr1	-	1266	8	ISM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	30353	4414	30353	-4414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGCTGCTCGCCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	135327884	135314463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781
ENSMUSG00000041879.14_135321903_135337193_1	chr1	-	1286	11	ISM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	21044	11853	21044	-11853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGCTATTTTCCTCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	135337193	135321902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130
ENSMUSG00000041881.14_34043546_34057291_1	chr17	+	521	4	NNC	ENSMUSG00000041881.14	novel	528	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2049	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTTTCTTAGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	34043545	34057291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_34043655_34044574_34044625_34048647_34048791_34057072
ENSMUSG00000041889.8_135298798_135302828_2	chr1	-	1613	5	FSM	ENSMUSG00000041889.8	ENSMUST00000041240.4	1763	5	147	3	147	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGAGTCCGTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	135302828	135298797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_135299735_135299934_135300103_135300889_135301024_135302115_135302288_135302626
ENSMUSG00000041889.8_135298798_135302879_1	chr1	-	1659	5	NNC	ENSMUSG00000041889.8	novel	1763	5	NA	NA	96	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1900	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGAGTCCGTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	135302879	135298797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_135299735_135299934_135300098_135300889_135301024_135302115_135302288_135302626
ENSMUSG00000041890.18_114865472_114883535_1	chr5	-	3705	7	ISM	ENSMUSG00000041890.18	ENSMUST00000112185.9	5032	19	28021	4	27960	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCATGTGCCCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	114883535	114865471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489
ENSMUSG00000041890.18_114865603_114883575_1	chr5	-	3614	7	ISM	ENSMUSG00000041890.18	ENSMUST00000112185.9	5032	19	27981	135	27920	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTGTTAAGCCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	114883575	114865602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489
ENSMUSG00000041890.18_114865845_114887384_1	chr5	-	3622	9	ISM	ENSMUSG00000041890.18	ENSMUST00000112185.9	5032	19	24172	377	24111	-373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTACTTGCCAAAGACGA	NA	NA	NA	NA	NA	NA	NA	NA	114887384	114865844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303
ENSMUSG00000041890.18_114866224_114902498_1	chr5	-	3614	14	ISM	ENSMUSG00000041890.18	ENSMUST00000112185.9	5032	19	9058	756	8997	-752	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACGCTCTCAAGAACACCA	NA	NA	NA	NA	NA	NA	NA	NA	114902498	114866223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407
ENSMUSG00000041890.18_114867636_114887401_1	chr5	-	1998	10	ISM	ENSMUSG00000041890.18	ENSMUST00000086564.11	2984	20	24122	0	24094	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	NA	NA	NA	NA	NA	NA	NA	114887401	114867635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303
ENSMUSG00000041890.18_114867931_114902479_1	chr5	-	2041	15	ISM	ENSMUSG00000041890.18	ENSMUST00000086564.11	2984	20	9044	295	9016	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAACATTTTCTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	114902479	114867930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407
ENSMUSG00000041890.18_114868139_114902701_1	chr5	-	1946	16	ISM	ENSMUSG00000041890.18	ENSMUST00000086564.11	2984	20	8822	503	8794	-208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGCATGTTTTCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	114902701	114868138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647
ENSMUSG00000041890.18_114871277_114911495_1	chr5	-	2049	18	ISM	ENSMUSG00000041890.18	ENSMUST00000086564.11	2984	20	28	3641	0	-3346	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAGGAGAACAAGCATGA	NA	NA	NA	NA	NA	NA	NA	NA	114911495	114871276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ENSMUSG00000041891.17_66113809_66124473_1	chr18	-	2384	5	ISM	ENSMUSG00000041891.17	ENSMUST00000120461.9	1741	14	11219	-1826	11219	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGTCTGTATCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	66124473	66113808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_66115782_66116891_66116959_66117223_66117346_66120825_66120977_66124402
ENSMUSG00000041891.17_66113935_66124671_1	chr18	-	2365	6	ISM	ENSMUSG00000041891.17	ENSMUST00000120461.9	1741	14	11021	-1700	11021	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAAGGTTTTGTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	66124671	66113934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_66115782_66116891_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564
ENSMUSG00000041891.17_66114093_66126204_1	chr18	-	2353	7	ISM	ENSMUSG00000041891.17	ENSMUST00000120461.9	1741	14	9488	-1542	9488	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAACGCTTTAGTCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	66126204	66114092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_66115782_66116891_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145
ENSMUSG00000041891.17_66114323_66127959_1	chr18	-	2360	9	ISM	ENSMUSG00000041891.17	ENSMUST00000120461.9	1741	14	7733	-1312	7733	-495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCATAACCGCGCCCATG	NA	NA	NA	NA	NA	NA	NA	NA	66127959	66114322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_66115782_66116891_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855
ENSMUSG00000041891.17_66114681_66131678_1	chr18	-	2334	13	ISM	ENSMUSG00000041891.17	ENSMUST00000120461.9	1741	14	4014	-954	4014	-853	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGCTTATTAAGAATACA	NA	NA	NA	NA	NA	NA	NA	NA	66131678	66114680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_66115782_66116891_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636
ENSMUSG00000041891.17_66114833_66135485_1	chr18	-	2336	14	FSM	ENSMUSG00000041891.17	ENSMUST00000120461.9	1741	14	207	-802	207	802	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATATGCCGCTTGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	66135485	66114832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_66115782_66116891_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ENSMUSG00000041891.17_66114886_66135545_1	chr18	-	2343	14	FSM	ENSMUSG00000041891.17	ENSMUST00000120461.9	1741	14	147	-749	147	749	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGCCACTTTTAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	66135545	66114885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_66115782_66116891_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ENSMUSG00000041891.17_66114941_66135689_1	chr18	-	2432	14	FSM	ENSMUSG00000041891.17	ENSMUST00000120461.9	1741	14	3	-694	3	694	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGTGCCTTGGATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	66135689	66114940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_66115782_66116891_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ENSMUSG00000041891.17_66115855_66117253_1	chr18	-	1134	2	ISM	ENSMUSG00000041891.17	ENSMUST00000120461.9	1741	14	18439	220	18439	-220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTAGTCGTAGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	66117253	66115854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_66116959_66117223
ENSMUSG00000041891.17_66116002_66120882_1	chr18	-	1136	3	ISM	ENSMUSG00000041891.17	ENSMUST00000120461.9	1741	14	14810	367	14810	-367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGCAGCTTTGAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	66120882	66116001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_66116959_66117223_66117346_66120825
ENSMUSG00000041891.17_66116230_66124624_1	chr18	-	1133	5	ISM	ENSMUSG00000041891.17	ENSMUST00000120461.9	1741	14	11068	595	11068	-595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTCCTGAAAATGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	66124624	66116229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564
ENSMUSG00000041891.17_66116372_66126186_1	chr18	-	1166	6	ISM	ENSMUSG00000041891.17	ENSMUST00000120461.9	1741	14	9506	737	9506	-737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTGCATTTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	66126186	66116371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145
ENSMUSG00000041891.17_66116629_66127959_1	chr18	-	1164	8	ISM	ENSMUSG00000041891.17	ENSMUST00000120461.9	1741	14	7733	994	7733	-994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGTGTCTATTATTGG	NA	NA	NA	NA	NA	NA	NA	NA	66127959	66116628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855
ENSMUSG00000041891.17_66116751_66129807_1	chr18	-	1117	9	ISM	ENSMUSG00000041891.17	ENSMUST00000120461.9	1741	14	5885	1116	5885	-1116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGTACTACATGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	66129807	66116750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752
ENSMUSG00000041895.16_109464157_109502135_1	chr11	-	1920	13	NNC	ENSMUSG00000041895.16	novel	2050	13	NA	NA	123	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	907	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGTTGTTTACATTT	NA	NA	NA	NA	NA	NA	NA	NA	109502135	109464156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_109464794_109467882_109467984_109468407_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ENSMUSG00000041895.16_109464157_109502135_2	chr11	-	1923	13	NNC	ENSMUSG00000041895.16	novel	2050	13	NA	NA	123	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGTTGTTTACATTT	NA	NA	NA	NA	NA	NA	NA	NA	109502135	109464156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_109464794_109467882_109467984_109468400_109468520_109469116_109469225_109470452_109470610_109473193_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ENSMUSG00000041895.16_109464157_109502135_3	chr11	-	1927	13	FSM	ENSMUSG00000041895.16	ENSMUST00000103060.10	2050	13	123	0	123	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGTTGTTTACATTT	NA	NA	NA	NA	NA	NA	NA	NA	109502135	109464156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_109464794_109467882_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ENSMUSG00000041895.16_109464257_109502258_1	chr11	-	1950	13	FSM	ENSMUSG00000041895.16	ENSMUST00000103060.10	2050	13	0	100	0	-100	multi-exon	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGCCAGGCAAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	109502258	109464256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_109464794_109467882_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ENSMUSG00000041895.16_109467332_109468493_1	chr11	-	745	2	ISM	ENSMUSG00000041895.16	ENSMUST00000047186.10	3338	12	33765	1374	33765	-1374	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGACTGTCAGGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	109468493	109467331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109467984_109468400
ENSMUSG00000041895.16_109467536_109470529_1	chr11	-	752	4	ISM	ENSMUSG00000041895.16	ENSMUST00000047186.10	3338	12	31729	1578	31729	-1578	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTAAGATTGCTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	109470529	109467535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109467984_109468400_109468520_109469116_109469225_109470452
ENSMUSG00000041895.16_109467604_109470607_1	chr11	-	762	4	ISM	ENSMUSG00000041895.16	ENSMUST00000047186.10	3338	12	31651	1646	31651	-1646	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTATACATACACTACCT	NA	NA	NA	NA	NA	NA	NA	NA	109470607	109467603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_109467984_109468400_109468520_109469116_109469225_109470452
ENSMUSG00000041907.10_42992342_42992790_1	chr1	+	209	2	NNC	ENSMUSG00000041907.10	novel	280	2	NA	NA	11	-58	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCCCCGTGTACTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	42992341	42992790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_42992394_42992633
ENSMUSG00000041907.10_42992342_42992849_1	chr1	+	270	2	FSM	ENSMUSG00000041907.10	ENST00000436841.1	280	2	11	-1	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGAGATCGCAAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	42992341	42992849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_42992394_42992631
ENSMUSG00000041911.4_71359285_71363065_1	chr2	+	2024	3	FSM	ENSMUSG00000041911.4	ENSMUST00000037119.4	4111	3	828	1259	828	-1259	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGACTCAGCGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	71359284	71363065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_71360651_71361300_71361501_71362607
ENSMUSG00000041912.13_94320625_94333352_1	chr3	+	887	6	FSM	ENSMUSG00000041912.13	ENSMUST00000200486.5	1231	6	1	343	0	-263	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTAATGATGACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	94320624	94333352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_94320670_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097
ENSMUSG00000041912.13_94330107_94333433_1	chr3	+	925	5	ISM	ENSMUSG00000041912.13	ENSMUST00000200486.5	1231	6	9483	262	0	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCTATTAACCATATGA	NA	NA	NA	NA	NA	NA	NA	NA	94330106	94333433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097
ENSMUSG00000041912.13_94331033_94333615_1	chr3	+	924	4	ISM	ENSMUSG00000041912.13	ENSMUST00000200486.5	1231	6	10409	80	926	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGAAATATGTTGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	94331032	94333615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94331109_94331807_94331998_94332869_94333010_94333097
ENSMUSG00000041912.13_94331090_94333630_1	chr3	+	882	4	ISM	ENSMUSG00000041912.13	ENSMUST00000200486.5	1231	6	10466	65	983	15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAGGAAACAGATCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	94331089	94333630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_94331109_94331807_94331998_94332869_94333010_94333097
ENSMUSG00000041915.10_31893189_31914815_1	chr18	+	2037	7	FSM	ENSMUSG00000041915.10	ENST00000680886.1	4379	7	45	2297	45	-980	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGATTTGCCTGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	31893188	31914815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_31893248_31894832_31894944_31904722_31905168_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ENSMUSG00000041915.10_31893232_31914890_1	chr18	+	2069	7	FSM	ENSMUSG00000041915.10	ENST00000680886.1	4379	7	88	2222	88	-905	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGGTGAACCTTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	31893231	31914890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_31893248_31894832_31894944_31904722_31905168_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ENSMUSG00000041915.10_31904901_31915196_1	chr18	+	2070	5	ISM	ENSMUSG00000041915.10	ENST00000680886.1	4379	7	11757	1916	10044	-599	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTCGGGAGGCAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	31904900	31915196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31905168_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ENSMUSG00000041915.10_31907720_31915468_1	chr18	+	2045	4	ISM	ENSMUSG00000041915.10	ENSMUST00000234413.2	3181	8	13591	327	12863	-327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGGATGAGGGAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	31907719	31915468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31907805_31909039_31909131_31911909_31912007_31913696
ENSMUSG00000041915.10_31909038_31915631_1	chr18	+	2125	3	ISM	ENSMUSG00000041915.10	ENSMUST00000234413.2	3181	8	14909	164	14181	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGGATTGATGCAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	31909037	31915631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_31909131_31911909_31912007_31913696
ENSMUSG00000041921.17_71337211_71354165_1	chr2	+	700	7	ISM	ENSMUSG00000041921.17	ENSMUST00000037210.9	1321	10	53591	1370	53591	-1370	internal_fragment	TRUE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGGAGGGCATGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	71337210	71354165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_71337287_71340084_71340235_71341755_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145
ENSMUSG00000041921.17_71340121_71355247_1	chr2	+	716	8	ISM	ENSMUSG00000041921.17	ENSMUST00000037210.9	1321	10	56501	288	56501	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTCATCACGCCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	71340120	71355247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_71340235_71341755_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
ENSMUSG00000041921.17_71340185_71355291_1	chr2	+	696	8	ISM	ENSMUSG00000041921.17	ENSMUST00000037210.9	1321	10	56565	244	56565	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAGAAGCCTGAGAATCG	NA	NA	NA	NA	NA	NA	NA	NA	71340184	71355291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_71340235_71341755_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
ENSMUSG00000041926.16_135190450_135192996_1	chr1	-	637	3	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	18826	0	18826	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGGAGTTATAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	135192996	135190449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135190868_135191790_135191934_135192920
ENSMUSG00000041926.16_135190670_135194650_1	chr1	-	609	4	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	17172	220	17172	-220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTTCCTGAAGAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	135194650	135190669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607
ENSMUSG00000041926.16_135190819_135194992_1	chr1	-	611	5	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	16830	369	16830	-369	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATGGCCCGGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	135194992	135190818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907
ENSMUSG00000041926.16_135191800_135195836_1	chr1	-	597	5	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	15986	1350	15986	-1350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCCAGGTGGGTAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	135195836	135191799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820
ENSMUSG00000041926.16_135191866_135195880_1	chr1	-	575	5	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	15942	1416	15942	-1416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGGGCCAAATCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	135195880	135191865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820
ENSMUSG00000041926.16_135191917_135195934_1	chr1	-	578	5	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	15888	1467	15888	-1467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAGACATACCCAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	135195934	135191916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820
ENSMUSG00000041926.16_135194907_135205156_1	chr1	-	611	5	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	6666	4457	6666	-4457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTCAACTCTCCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	135205156	135194906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135195021_135195820_135195935_135199266_135199503_135200099_135200217_135205126
ENSMUSG00000041926.16_135195897_135206557_1	chr1	-	593	5	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	5265	5447	5265	-5447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGCTGCGTCAGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	135206557	135195896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135195935_135199266_135199503_135200099_135200217_135205126_135205276_135206504
ENSMUSG00000041926.16_135199290_135211319_1	chr1	-	640	5	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	503	8840	503	-8840	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATCTCCACCATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	135211319	135199289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
ENSMUSG00000041926.16_135199408_135211373_1	chr1	-	576	5	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	449	8958	449	-8958	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGTTAGCCGACGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	135211373	135199407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
ENSMUSG00000041926.16_135199465_135211435_1	chr1	-	581	5	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	387	9015	387	-9015	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAATGGAAAATCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	135211435	135199464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
ENSMUSG00000041926.16_135200183_135211560_1	chr1	-	585	4	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	262	9733	262	-9733	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGCCAAGGAGGAATACAG	NA	NA	NA	NA	NA	NA	NA	NA	135211560	135200182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135200217_135205126_135205276_135206504_135206646_135211299
ENSMUSG00000041926.16_135205236_135211696_1	chr1	-	578	3	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	126	14786	126	-14786	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAAGAGAGGACCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	135211696	135205235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_135205276_135206504_135206646_135211299
ENSMUSG00000041935.11_4012275_4019148_1	chr15	-	3914	3	ISM	ENSMUSG00000041935.11	ENSMUST00000046633.10	5076	6	6078	758	6048	-758	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGTATTATATCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	4019148	4012274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_4015962_4018072_4018188_4019036
ENSMUSG00000041935.11_4012429_4021346_1	chr15	-	3927	4	ISM	ENSMUSG00000041935.11	ENSMUST00000046633.10	5076	6	3880	912	3850	-912	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCTTTTCTATCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	4021346	4012428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199
ENSMUSG00000041935.11_4013663_4025226_1	chr15	-	419	4	FSM	ENSMUSG00000041935.11	ENST00000612065.1	388	4	-30	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTAATGTGAATTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	4025226	4013662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_4013698_4021199_4021347_4021839_4021947_4025096
ENSMUSG00000041939.15_114588355_114598209_1	chr5	+	744	7	NNC	ENSMUSG00000041939.15	novel	764	7	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTGTAGGGGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	114588354	114598209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_114588483_114590427_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
ENSMUSG00000041939.15_114588355_114598209_2	chr5	+	740	7	NNC	ENSMUSG00000041939.15	novel	764	7	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTGTAGGGGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	114588354	114598209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_114588483_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598109
ENSMUSG00000041939.15_114588355_114598209_3	chr5	+	746	7	FSM	ENSMUSG00000041939.15	ENST00000392727.7	764	7	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTGTAGGGGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	114588354	114598209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_114588483_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
ENSMUSG00000041939.15_114588355_114598209_4	chr5	+	740	7	NNC	ENSMUSG00000041939.15	novel	764	7	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTGTAGGGGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	114588354	114598209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_114588483_114590425_114590530_114590946_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
ENSMUSG00000041957.16_16031182_16048640_1	chr16	+	1099	4	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	0	41936	0	-41936	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATCTTCTAAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	16031181	16048640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16031460_16043164_16043278_16043583_16044156_16048504
ENSMUSG00000041957.16_16031300_16058396_1	chr16	+	1014	5	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	118	32180	118	-32180	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTGCTCAAACTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	16031299	16058396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16031460_16043164_16043278_16043583_16044156_16048504_16048641_16058363
ENSMUSG00000041957.16_16031420_16058506_1	chr16	+	1004	5	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	238	32070	238	-32070	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCTCGGCTACTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	16031419	16058506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16031460_16043164_16043278_16043583_16044156_16048504_16048641_16058363
ENSMUSG00000041957.16_16043669_16078218_1	chr16	+	1038	5	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	12487	12358	12487	-12358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGATGATGAGAAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	16043668	16078218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16044156_16048504_16048641_16058363_16058572_16064729_16064908_16078189
ENSMUSG00000041957.16_16043825_16079522_1	chr16	+	1026	6	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	12643	11054	12643	-11054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCCAGAGAAATATTCC	NA	NA	NA	NA	NA	NA	NA	NA	16043824	16079522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16044156_16048504_16048641_16058363_16058572_16064729_16064908_16078189_16078308_16079467
ENSMUSG00000041957.16_16044036_16080501_1	chr16	+	998	7	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	12854	10075	12854	-10075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAGGATGTATTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	16044035	16080501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16044156_16048504_16048641_16058363_16058572_16064729_16064908_16078189_16078308_16079467_16079633_16080428
ENSMUSG00000041957.16_16044101_16080567_1	chr16	+	999	7	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	12919	10009	12919	-10009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTCTCCAGAACCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	16044100	16080567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16044156_16048504_16048641_16058363_16058572_16064729_16064908_16078189_16078308_16079467_16079633_16080428
ENSMUSG00000041957.16_16048608_16085194_1	chr16	+	1030	7	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	17426	5382	17426	-5382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGAGGTCCGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	16048607	16085194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16048641_16058363_16058572_16064729_16064908_16078189_16078308_16079467_16079633_16080428_16080603_16085040
ENSMUSG00000041957.16_16058399_16086428_1	chr16	+	1009	7	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	27217	4148	27217	-4148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTACTGACCTTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	16058398	16086428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16058572_16064729_16064908_16078189_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381
ENSMUSG00000041957.16_16058460_16086489_1	chr16	+	1009	7	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	27278	4087	27278	-4087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAAAATAGTTACCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	16058459	16086489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16058572_16064729_16064908_16078189_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381
ENSMUSG00000041957.16_16058515_16086550_1	chr16	+	1015	7	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	27333	4026	27333	-4026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCATCAGCATAGGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	16058514	16086550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16058572_16064729_16064908_16078189_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381
ENSMUSG00000041957.16_16064780_16090052_1	chr16	+	1037	8	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	33598	524	33598	-524	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCAACAGCCGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	16064779	16090052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16064908_16078189_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
ENSMUSG00000041957.16_16064858_16090085_1	chr16	+	992	8	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	33676	491	33676	-491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTCTTAAAGACTGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	16064857	16090085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16064908_16078189_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
ENSMUSG00000041957.16_16078224_16090192_1	chr16	+	1015	7	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	47042	384	47042	-384	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAACACCTATTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	16078223	16090192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
ENSMUSG00000041957.16_16078272_16090246_1	chr16	+	1021	7	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	47090	330	47090	-330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTATATTCTTTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	16078271	16090246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
ENSMUSG00000041957.16_16079568_16090375_1	chr16	+	1014	6	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	48386	201	48386	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGCATCATTATTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	16079567	16090375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16079633_16080428_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
ENSMUSG00000041957.16_16080524_16090576_1	chr16	+	1055	5	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	49342	0	49342	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGTGACCTTCGATT	NA	NA	NA	NA	NA	NA	NA	NA	16080523	16090576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
ENSMUSG00000041958.11_78219556_78226272_1	chr11	+	456	5	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	315	7336	315	-7336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGAGGACGGCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	78219555	78226272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78219698_78219800_78219913_78223775_78223866_78224492_78224585_78226252
ENSMUSG00000041958.11_78219800_78226460_1	chr11	+	503	4	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	559	7148	559	-7148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGGCTTGGGCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	78219799	78226460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78219913_78223775_78223866_78224492_78224585_78226252
ENSMUSG00000041958.11_78219871_78227553_1	chr11	+	472	5	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	630	6055	630	-6055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCACGATGTCCACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	78219870	78227553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513
ENSMUSG00000041958.11_78226327_78230219_1	chr11	+	443	4	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	7086	3389	7086	-3389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTTGCCCACTCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	78226326	78230219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78226461_78227513_78227657_78228614_78228730_78230168
ENSMUSG00000041958.11_78226385_78230269_1	chr11	+	435	4	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	7144	3339	7144	-3339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCACCAATGCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	78226384	78230269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78226461_78227513_78227657_78228614_78228730_78230168
ENSMUSG00000041958.11_78226438_78230314_1	chr11	+	427	4	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	7197	3294	7197	-3294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATAGTCACCCTATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	78226437	78230314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78226461_78227513_78227657_78228614_78228730_78230168
ENSMUSG00000041958.11_78227611_78232088_1	chr11	+	446	5	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	8370	1520	8370	-1520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTGCTCTCAGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	78227610	78232088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050
ENSMUSG00000041958.11_78230187_78232574_1	chr11	+	455	4	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	10946	1034	10946	-1034	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCGTCCAGAAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	78230186	78232574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78230315_78230834_78230936_78232050_78232262_78232559
ENSMUSG00000041958.11_78230245_78232621_1	chr11	+	444	4	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	11004	987	11004	-987	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGCCTTTGCTGCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	78230244	78232621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78230315_78230834_78230936_78232050_78232262_78232559
ENSMUSG00000041958.11_78230294_78232679_1	chr11	+	453	4	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	11053	929	11053	-929	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCCTCCTCCACCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	78230293	78232679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78230315_78230834_78230936_78232050_78232262_78232559
ENSMUSG00000041958.11_78230890_78232791_1	chr11	+	489	3	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	11649	817	11649	-817	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAACTCGCAAGTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	78230889	78232791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_78230936_78232050_78232262_78232559
ENSMUSG00000041959.15_93462470_93471617_1	chr3	+	269	3	FSM	ENSMUSG00000041959.15	ENSMUST00000045756.14	685	3	83	333	83	-140	multi-exon	TRUE	canonical	NA	NA	NA	NA	3262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTCCAGAGCTTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	93462469	93471617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_93462519_93468250_93468403_93471549
ENSMUSG00000041959.15_93468248_93471757_1	chr3	+	363	2	ISM	ENSMUSG00000041959.15	ENSMUST00000170612.2	477	3	214	0	214	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTCACTTGAGGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	93468247	93471757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_93468403_93471549
ENSMUSG00000041966.19_70905830_70920220_1	chr2	+	825	8	FSM	ENSMUSG00000041966.19	ENST00000611110.4	947	8	41	81	41	-81	multi-exon	FALSE	canonical	NA	NA	NA	NA	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTCTGTGACCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	70905829	70920220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_70905881_70908403_70908509_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ENSMUSG00000041966.19_70912308_70920312_1	chr2	+	703	6	NNC	ENSMUSG00000041966.19	novel	947	8	NA	NA	6519	11	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCCTCAGTCAGCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	70912307	70920312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_70912398_70914768_70914874_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ENSMUSG00000041974.11_15721978_15730667_1	chr16	-	343	3	ISM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	234048	14890	234048	-14890	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCCTTGCTGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	15730667	15721977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_15722126_15730382_15730443_15730532
ENSMUSG00000041975.18_70794905_70806481_1	chr2	-	1496	5	ISM	ENSMUSG00000041975.18	ENSMUST00000100037.9	2254	10	79446	0	42237	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTGTTGGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	70806481	70794904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417
ENSMUSG00000041975.18_70795174_70812329_1	chr2	-	1408	7	ISM	ENSMUSG00000041975.18	ENSMUST00000100037.9	2254	10	73598	269	36389	-269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTCTGTGAGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	70812329	70795173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198
ENSMUSG00000041975.18_70795257_70812414_1	chr2	-	1410	7	ISM	ENSMUSG00000041975.18	ENSMUST00000100037.9	2254	10	73513	352	36304	-352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACACTGTCTGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	70812414	70795256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198
ENSMUSG00000041975.18_70795497_70848583_1	chr2	-	1407	9	ISM	ENSMUSG00000041975.18	ENSMUST00000112186.9	2347	10	37344	592	135	284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGTCAGCCAGTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	70848583	70795496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70823827_70823920_70848563
ENSMUSG00000041975.18_70795540_70848718_1	chr2	-	1499	9	ISM	ENSMUSG00000041975.18	ENSMUST00000112186.9	2347	10	37209	635	0	241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTACTTTATTGTTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	70848718	70795539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70823827_70823920_70848563
ENSMUSG00000041975.18_70795607_70848718_1	chr2	-	1432	9	ISM	ENSMUSG00000041975.18	ENSMUST00000112186.9	2347	10	37209	702	0	174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGAATTAAGAAGCGTA	NA	NA	NA	NA	NA	NA	NA	NA	70848718	70795606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70823827_70823920_70848563
ENSMUSG00000041975.18_70795781_70885916_1	chr2	-	1460	10	FSM	ENSMUSG00000041975.18	ENSMUST00000112186.9	2347	10	11	876	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCAGAGATGAGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	70885916	70795780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70823827_70823920_70848563_70848719_70885714
ENSMUSG00000041986.17_53819490_53882349_1	chr9	-	1620	10	FSM	ENSMUSG00000041986.17	ENST00000443271.2	1731	10	111	0	111	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACATGATAAGCCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	53882349	53819489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_53820179_53826876_53827011_53828606_53828658_53831683_53831753_53833249_53833384_53838738_53838869_53841400_53841525_53843013_53843160_53854131_53854234_53882308
ENSMUSG00000041995.9_95461745_95473696_1	chr13	+	1241	2	FSM	ENSMUSG00000041995.9	ENSMUST00000045909.8	1894	2	0	653	0	-653	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCGACAAGTACATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	95461744	95473696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_95461853_95472563
ENSMUSG00000042029.8_116370887_116378404_1	chr12	+	395	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	1858	37582	1858	-37582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGGATCTGTGTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	116370886	116378404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116370931_116375994_116376184_116376680_116376796_116378357
ENSMUSG00000042029.8_116376050_116379072_1	chr12	+	432	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	7021	36914	7021	-36914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAGGCTTTGTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	116376049	116379072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116376184_116376680_116376796_116378357_116378513_116379044
ENSMUSG00000042029.8_116376166_116379168_1	chr12	+	412	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	7137	36818	7137	-36818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGGAAGAGGTAAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	116376165	116379168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116376184_116376680_116376796_116378357_116378513_116379044
ENSMUSG00000042029.8_116376755_116382893_1	chr12	+	382	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	7726	33093	7726	-33093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATCCATGAGACCATTAA	NA	NA	NA	NA	NA	NA	NA	NA	116376754	116382893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116376796_116378357_116378513_116379044_116379180_116382842
ENSMUSG00000042029.8_116378439_116386848_1	chr12	+	407	5	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	9410	29138	9410	-29138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATGGCATCCACCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	116378438	116386848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815
ENSMUSG00000042029.8_116382841_116389487_1	chr12	+	436	5	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	13812	26499	13812	-26499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACAATGAAATCCAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	116382840	116389487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398
ENSMUSG00000042029.8_116384347_116390261_1	chr12	+	403	5	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	15318	25725	15318	-25725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAATATTGGGAAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	116384346	116390261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195
ENSMUSG00000042029.8_116388294_116391337_1	chr12	+	409	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	19265	24649	19265	-24649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTATAGTCTCCACG	NA	NA	NA	NA	NA	NA	NA	NA	116388293	116391337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116388335_116389398_116389525_116390195_116390376_116391275
ENSMUSG00000042029.8_116389478_116393289_1	chr12	+	396	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	20449	22697	20449	-22697	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGAGGACATTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	116389477	116393289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116389525_116390195_116390376_116391275_116391429_116393273
ENSMUSG00000042029.8_116390236_116393394_1	chr12	+	414	3	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	21207	22592	21207	-22592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTGGTGTGAGCGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	116390235	116393394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116390376_116391275_116391429_116393273
ENSMUSG00000042029.8_116390356_116393489_1	chr12	+	389	3	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	21327	22497	21327	-22497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGGTCTGAATCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	116390355	116393489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116390376_116391275_116391429_116393273
ENSMUSG00000042029.8_116391408_116398252_1	chr12	+	397	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	22379	17734	22379	-17734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAGAAATCATTGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	116391407	116398252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116391429_116393273_116393497_116393714_116393819_116398203
ENSMUSG00000042029.8_116393422_116401633_1	chr12	+	396	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	24393	14353	24393	-14353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGCCTCTGCTGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	116393421	116401633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116393497_116393714_116393819_116398203_116398378_116401590
ENSMUSG00000042029.8_116393723_116402232_1	chr12	+	356	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	24694	13754	24694	-13754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCTGAGAAATCAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	116393722	116402232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116393819_116398203_116398378_116401590_116401662_116402217
ENSMUSG00000042029.8_116393762_116402312_1	chr12	+	397	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	24733	13674	24733	-13674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTCCTGGAGCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	116393761	116402312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116393819_116398203_116398378_116401590_116401662_116402217
ENSMUSG00000042029.8_116398259_116402548_1	chr12	+	405	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	29230	13438	29230	-13438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTTGTACATGGAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	116398258	116402548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116398378_116401590_116401662_116402217_116402369_116402484
ENSMUSG00000042029.8_116398364_116402658_1	chr12	+	410	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	29335	13328	29335	-13328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTACTTATCCTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	116398363	116402658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116398378_116401590_116401662_116402217_116402369_116402484
ENSMUSG00000042029.8_116402311_116403627_1	chr12	+	397	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	33282	12359	33282	-12359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGGTTAGAAAACAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	116402310	116403627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116402369_116402484_116402659_116403378_116403496_116403579
ENSMUSG00000042029.8_116402573_116404216_1	chr12	+	399	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	33544	11770	33544	-11770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAATGCAACTTTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	116402572	116404216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116402659_116403378_116403496_116403579_116403721_116404161
ENSMUSG00000042029.8_116403422_116406641_1	chr12	+	400	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	34393	9345	34393	-9345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAGTCACAGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	116403421	116406641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116403496_116403579_116403721_116404161_116404262_116406556
ENSMUSG00000042029.8_116403471_116406695_1	chr12	+	405	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	34442	9291	34442	-9291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGTATTGCCTGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	116403470	116406695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116403496_116403579_116403721_116404161_116404262_116406556
ENSMUSG00000042029.8_116403671_116407989_1	chr12	+	407	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	34642	7997	34642	-7997	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGCACCATGCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	116403670	116407989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116403721_116404161_116404262_116406556_116406745_116407920
ENSMUSG00000042029.8_116406637_116414042_1	chr12	+	400	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	37608	1944	37608	-1944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCATTGTGTGCCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	116406636	116414042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116406745_116407920_116408062_116411276_116411381_116413995
ENSMUSG00000042029.8_116406689_116414096_1	chr12	+	402	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	37660	1890	37660	-1890	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTACATTGTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	116406688	116414096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116406745_116407920_116408062_116411276_116411381_116413995
ENSMUSG00000042029.8_116407939_116415986_1	chr12	+	428	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	38910	0	38910	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATATGACTGAACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	116407938	116415986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116408062_116411276_116411381_116413995_116414097_116415886
ENSMUSG00000042032.14_40570141_40573386_1	chr11	-	1091	3	ISM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	10215	0	10215	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGGCTTTATTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	40573386	40570140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40571022_40571482_40571597_40573290
ENSMUSG00000042032.14_40570141_40573484_1	chr11	-	1189	3	ISM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	10117	0	10117	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGGCTTTATTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	40573484	40570140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40571022_40571482_40571597_40573290
ENSMUSG00000042032.14_40570342_40575562_1	chr11	-	1042	4	ISM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	8039	201	8039	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCTGATGCCTACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	40575562	40570341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508
ENSMUSG00000042032.14_40570462_40576054_1	chr11	-	1022	5	ISM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	7547	321	7547	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGCTTTGCTTGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	40576054	40570461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053
ENSMUSG00000042032.14_40570462_40576168_1	chr11	-	1136	5	ISM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	7433	321	7433	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGCTTTGCTTGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	40576168	40570461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053
ENSMUSG00000042032.14_40570651_40578622_1	chr11	-	1142	6	ISM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	4979	510	4979	-510	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCGCTATACAAGTAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	40578622	40570650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427
ENSMUSG00000042032.14_40570802_40583448_1	chr11	-	1135	7	FSM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	153	661	153	-661	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTCAAGAATAAAGGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	40583448	40570801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40583304
ENSMUSG00000042032.14_40570863_40583448_1	chr11	-	1074	7	FSM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	153	722	153	-722	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTCATTAGCTCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	40583448	40570862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40583304
ENSMUSG00000042032.14_40570882_40583481_1	chr11	-	1088	7	FSM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	120	741	120	-741	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAGATGGAGACAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	40583481	40570881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40583304
ENSMUSG00000042032.14_40570921_40583601_1	chr11	-	1169	7	FSM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	0	780	0	-780	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGGAATCAAAGAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	40583601	40570920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40583304
ENSMUSG00000042035.12_101358553_101362499_1	chr3	+	137	2	ISM	ENSMUSG00000042035.12	ENSMUST00000195164.2	3876	11	72899	4973	72899	-4973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAACCGCACCAGCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	101358552	101362499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_101358611_101362420
ENSMUSG00000042035.12_101362768_101365016_1	chr3	+	139	2	ISM	ENSMUSG00000042035.12	ENSMUST00000195164.2	3876	11	77114	2456	77114	-2456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTCGATCGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	101362767	101365016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_101362829_101364938
ENSMUSG00000042042.15_118086181_118098023_1	chr6	-	470	4	ISM	ENSMUSG00000042042.15	ENSMUST00000049344.15	3661	8	18078	1768	18078	-1768	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAAAGCCATGAATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	118098023	118086180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_118086356_118091326_118091409_118096570_118096666_118097905
ENSMUSG00000042043.7_94822518_94973654_1	chr13	+	204	3	ISM	ENSMUSG00000042043.7	ENST00000522370.1	436	4	90	5597	90	-5597	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGCGTCGGTTAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	94822517	94973654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94822577_94968867_94968974_94973615
ENSMUSG00000042043.7_94925418_94979251_1	chr13	+	420	4	FSM	ENSMUSG00000042043.7	ENST00000518338.6	519	4	-36	135	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATGTTTTTTTGCATTAA	NA	NA	NA	NA	NA	NA	NA	NA	94925417	94979251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_94925511_94968867_94968974_94973575_94973703_94979157
ENSMUSG00000042043.7_94925418_94979251_2	chr13	+	380	4	FSM	ENSMUSG00000042043.7	ENSMUST00000046644.7	559	4	0	179	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATGTTTTTTTGCATTAA	NA	NA	NA	NA	NA	NA	NA	NA	94925417	94979251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_94925511_94968867_94968974_94973615_94973703_94979157
ENSMUSG00000042043.7_94925418_94979431_1	chr13	+	473	3	FSM	ENSMUSG00000042043.7	ENST00000520361.5	439	3	-8	-26	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATTTTCAGTTGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	94925417	94979431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_94925511_94968867_94968974_94979157
ENSMUSG00000042043.7_94968867_94979251_1	chr13	+	328	3	ISM	ENSMUSG00000042043.7	ENST00000518338.6	519	4	43413	135	14625	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATGTTTTTTTGCATTAA	NA	NA	NA	NA	NA	NA	NA	NA	94968866	94979251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94968974_94973575_94973703_94979157
ENSMUSG00000042043.7_94968922_94979408_1	chr13	+	430	3	ISM	ENSMUSG00000042043.7	ENST00000518338.6	519	4	43468	-22	14680	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTTTGTTTTATACT	NA	NA	NA	NA	NA	NA	NA	NA	94968921	94979408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94968974_94973575_94973703_94979157
ENSMUSG00000042043.7_94973613_94979431_1	chr13	+	364	2	ISM	ENSMUSG00000042043.7	ENSMUST00000220825.2	497	4	19371	-23	19371	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATTTTCAGTTGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	94973612	94979431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_94973703_94979157
ENSMUSG00000042043.7_94973613_94979431_2	chr13	+	363	2	NNC	ENSMUSG00000042043.7	novel	559	4	NA	NA	19371	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATTTTCAGTTGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	94973612	94979431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_94973703_94979158
ENSMUSG00000042050.9_116177094_116219554_1	chr12	-	2121	18	ISM	ENSMUSG00000042050.9	ENSMUST00000039349.8	3721	22	7088	6423	7088	-6423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTATCTCCCAGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	116219554	116177093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_116177126_116177301_116177402_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219450
ENSMUSG00000042050.9_116177352_116219715_1	chr12	-	2200	17	ISM	ENSMUSG00000042050.9	ENSMUST00000039349.8	3721	22	6927	6681	6927	-6681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTCCTGCCTTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	116219715	116177351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_116177402_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219450
ENSMUSG00000042063.12_116011344_116023118_1	chr12	+	864	3	FSM	ENSMUSG00000042063.12	ENSMUST00000073551.6	1958	3	0	1094	0	-1094	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTTTAGTAGTGGATCT	NA	NA	NA	NA	NA	NA	NA	NA	116011343	116023118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_116011487_116018341_116018469_116022524
ENSMUSG00000042063.12_116011449_116023118_1	chr12	+	759	3	FSM	ENSMUSG00000042063.12	ENSMUST00000073551.6	1958	3	105	1094	53	-1094	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTTTAGTAGTGGATCT	NA	NA	NA	NA	NA	NA	NA	NA	116011448	116023118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_116011487_116018341_116018469_116022524
ENSMUSG00000042066.17_132284061_132288178_1	chr1	-	1797	3	ISM	ENSMUSG00000042066.17	ENSMUST00000136828.3	2771	4	6632	7	6632	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACCATCCTGTCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	132288178	132284060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132285556_132286640_132286777_132288012
ENSMUSG00000042066.17_132284684_132288782_1	chr1	-	1775	3	NNC	ENSMUSG00000042066.17	novel	2771	4	NA	NA	6028	560	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGGCTGTGGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	132288782	132284683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_132285556_132286640_132286770_132288008
ENSMUSG00000042066.17_132285045_132308578_1	chr1	-	1772	4	ISM	ENSMUSG00000042066.17	ENSMUST00000132435.2	3514	5	9478	984	-4103	199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGGACACTCTCAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	132308578	132285044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132285556_132286640_132286777_132288012_132288954_132308394
ENSMUSG00000042066.17_132285218_132308757_1	chr1	-	1778	4	ISM	ENSMUSG00000042066.17	ENSMUST00000132435.2	3514	5	9299	1157	-4282	26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGATCCCACTAGCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	132308757	132285217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132285556_132286640_132286777_132288012_132288954_132308394
ENSMUSG00000042066.17_132285244_132304475_1	chr1	-	1459	4	FSM	ENSMUSG00000042066.17	ENST00000637895.1	1459	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCTGCCGCCCCACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	132304475	132285243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_132285556_132286640_132286777_132288012_132288954_132304405
ENSMUSG00000042066.17_132285296_132308838_1	chr1	-	1781	4	ISM	ENSMUSG00000042066.17	ENSMUST00000132435.2	3514	5	9218	1235	-4363	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGGCCTCCCTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	132308838	132285295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132285556_132286640_132286777_132288012_132288954_132308394
ENSMUSG00000042066.17_132285434_132318419_1	chr1	-	1765	5	FSM	ENSMUSG00000042066.17	ENST00000545499.5	3286	5	141	1380	141	-190	multi-exon	TRUE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGTGATCCTGGCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	132318419	132285433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_132285556_132286640_132286777_132288012_132288954_132308394_132308920_132318378
ENSMUSG00000042066.17_132285484_132318479_1	chr1	-	1775	5	FSM	ENSMUSG00000042066.17	ENST00000545499.5	3286	5	81	1430	81	-240	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAGGTGTGGAGAACGC	NA	NA	NA	NA	NA	NA	NA	NA	132318479	132285483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_132285556_132286640_132286777_132288012_132288954_132308394_132308920_132318378
ENSMUSG00000042066.17_132285540_132318525_1	chr1	-	1765	5	FSM	ENSMUSG00000042066.17	ENST00000545499.5	3286	5	35	1486	35	-296	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGACCCGAGTCACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	132318525	132285539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_132285556_132286640_132286777_132288012_132288954_132308394_132308920_132318378
ENSMUSG00000042073.16_106325697_106327403_1	chr9	+	413	2	ISM	ENSMUSG00000042073.16	ENSMUST00000048527.15	1745	4	123	2719	123	-2065	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGCTGTGGCCATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	106325696	106327403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_106325909_106327202
ENSMUSG00000042079.14_117877301_117902583_1	chr6	+	2266	4	NNC	ENSMUSG00000042079.14	novel	2271	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	117877300	117902583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_117877468_117894436_117894560_117896059_117896121_117900668
ENSMUSG00000042079.14_117883756_117901415_1	chr6	+	982	4	FSM	ENSMUSG00000042079.14	ENSMUST00000035493.14	2147	4	0	1165	0	-1165	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCCTATAGTGCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	117883755	117901415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_117883801_117894430_117894560_117896059_117896121_117900668
ENSMUSG00000042079.14_117883940_117901073_1	chr6	+	764	3	FSM	ENSMUSG00000042079.14	ENSMUST00000163168.9	2401	3	130	1507	130	-1507	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGGATGCACAAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	117883939	117901073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_117884170_117894430_117894560_117900668
ENSMUSG00000042079.14_117884071_117901149_1	chr6	+	709	3	FSM	ENSMUSG00000042079.14	ENSMUST00000163168.9	2401	3	261	1431	261	-1431	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGACCCGGAAGGCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	117884070	117901149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_117884170_117894430_117894560_117900668
ENSMUSG00000042079.14_117884071_117901195_1	chr6	+	755	3	FSM	ENSMUSG00000042079.14	ENSMUST00000163168.9	2401	3	261	1385	261	-1385	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCACAAGAGTTAGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	117884070	117901195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_117884170_117894430_117894560_117900668
ENSMUSG00000042104.19_119224227_119328738_1	chr14	-	4373	37	ISM	ENSMUSG00000042104.19	ENST00000376747.8	4559	39	8064	-75	8064	75	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATTCACGTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	119328738	119224226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_119224326_119232363_119232485_119235508_119235626_119239182_119239298_119240237_119240399_119244556_119244740_119245474_119245560_119246410_119246507_119250887_119250971_119251934_119252020_119256229_119256316_119256878_119257038_119263833_119264024_119266374_119266455_119269605_119269709_119272253_119272350_119273381_119273507_119278904_119279037_119280007_119280215_119281911_119282004_119286592_119286692_119286772_119286897_119287047_119287213_119292015_119292148_119294974_119295111_119295606_119295693_119296432_119296553_119298651_119298803_119308222_119308315_119312742_119312804_119315063_119315164_119319116_119319218_119321266_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605
ENSMUSG00000042104.19_119232364_119332801_1	chr14	-	4355	37	ISM	ENSMUSG00000042104.19	ENST00000376747.8	4559	39	4001	8062	4001	-8062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGAGTGAGTGCTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	119332801	119232363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_119232485_119235508_119235626_119239182_119239298_119240237_119240399_119244556_119244740_119245474_119245560_119246410_119246507_119250887_119250971_119251934_119252020_119256229_119256316_119256878_119257038_119263833_119264024_119266374_119266455_119269605_119269709_119272253_119272350_119273381_119273507_119278904_119279037_119280007_119280215_119281911_119282004_119286592_119286692_119286772_119286897_119287047_119287213_119292015_119292148_119294974_119295111_119295606_119295693_119296432_119296553_119298651_119298803_119308222_119308315_119312742_119312804_119315063_119315164_119319116_119319218_119321266_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605_119328737_119332718
ENSMUSG00000042104.19_119235527_119336687_1	chr14	-	4281	37	ISM	ENSMUSG00000042104.19	ENST00000376747.8	4559	39	115	11225	115	-11225	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGACGATCGACCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	119336687	119235526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_119235626_119239182_119239298_119240237_119240399_119244556_119244740_119245474_119245560_119246410_119246507_119250887_119250971_119251934_119252020_119256229_119256316_119256878_119257038_119263833_119264024_119266374_119266455_119269605_119269709_119272253_119272350_119273381_119273507_119278904_119279037_119280007_119280215_119281911_119282004_119286592_119286692_119286772_119286897_119287047_119287213_119292015_119292148_119294974_119295111_119295606_119295693_119296432_119296553_119298651_119298803_119308222_119308315_119312742_119312804_119315063_119315164_119319116_119319218_119321266_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605_119328737_119332718_119332802_119336622
ENSMUSG00000042104.19_119239136_119336842_1	chr14	-	4384	36	ISM	ENSMUSG00000042104.19	ENST00000376747.8	4559	39	-40	14834	0	-14834	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAAAATGTTTCAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	119336842	119239135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_119239298_119240237_119240399_119244556_119244740_119245474_119245560_119246410_119246507_119250887_119250971_119251934_119252020_119256229_119256316_119256878_119257038_119263833_119264024_119266374_119266455_119269605_119269709_119272253_119272350_119273381_119273507_119278904_119279037_119280007_119280215_119281911_119282004_119286592_119286692_119286772_119286897_119287047_119287213_119292015_119292148_119294974_119295111_119295606_119295693_119296432_119296553_119298651_119298803_119308222_119308315_119312742_119312804_119315063_119315164_119319116_119319218_119321266_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605_119328737_119332718_119332802_119336622
ENSMUSG00000042104.19_119315064_119336687_1	chr14	-	837	8	FSM	ENSMUSG00000042104.19	ENST00000376714.7	952	8	115	0	115	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTAAAGTTTATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	119336687	119315063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_119315164_119321266_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605_119328737_119332718_119332802_119336622
ENSMUSG00000042104.19_119315064_119336687_2	chr14	-	831	8	NNC	ENSMUSG00000042104.19	novel	952	8	NA	NA	115	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTAAAGTTTATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	119336687	119315063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_119315164_119321266_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605_119328731_119332718_119332802_119336622
ENSMUSG00000042104.19_119315064_119336842_1	chr14	-	986	8	NNC	ENSMUSG00000042104.19	novel	6456	39	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTAAAGTTTATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	119336842	119315063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_119315164_119321266_119321340_119323549_119323647_119326576_119326746_119328062_119328176_119328605_119328737_119332718_119332802_119336622
ENSMUSG00000042104.19_119321267_119336842_1	chr14	-	892	7	ISM	ENSMUSG00000042104.19	ENST00000376714.7	952	8	-40	6203	0	-6203	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTCTGAATAGAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	119336842	119321266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605_119328737_119332718_119332802_119336622
ENSMUSG00000042105.19_128213304_128297266_1	chr7	+	3440	18	NNC	ENSMUSG00000042105.19	novel	3445	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTCTGTGCATCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	128213303	128297266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_128213416_128237881_128237963_128260739_128260877_128265700_128265869_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278457_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ENSMUSG00000042105.19_128213304_128297266_2	chr7	+	3445	18	FSM	ENSMUSG00000042105.19	ENST00000648262.1	3445	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTCTGTGCATCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	128213303	128297266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265700_128265869_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ENSMUSG00000042105.19_128213304_128297266_3	chr7	+	3439	18	NNC	ENSMUSG00000042105.19	novel	3445	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTCTGTGCATCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	128213303	128297266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_128213416_128237881_128237963_128260739_128260877_128265700_128265869_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295905
ENSMUSG00000042105.19_128213304_128297266_4	chr7	+	3441	18	NNC	ENSMUSG00000042105.19	novel	3445	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTCTGTGCATCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	128213303	128297266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_128213416_128237881_128237963_128260739_128260877_128265700_128265869_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278527_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ENSMUSG00000042105.19_128260732_128295970_1	chr7	+	2150	18	ISM	ENSMUSG00000042105.19	ENSMUST00000043138.13	4734	20	47648	2179	-28538	-1296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTTTTTAATGAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	128260731	128295970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ENSMUSG00000042105.19_128290820_128296043_1	chr7	+	707	6	NIC	ENSMUSG00000042105.19	novel	2011	6	NA	NA	77	-1223	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACCTACGAAAATTAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	128290819	128296043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_128290971_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295850
ENSMUSG00000042105.19_128290875_128296126_1	chr7	+	735	6	NIC	ENSMUSG00000042105.19	novel	2011	6	NA	NA	132	-1140	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAGATAGTAGTCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	128290874	128296126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_128290971_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295850
ENSMUSG00000042105.19_128290943_128296165_1	chr7	+	706	6	NIC	ENSMUSG00000042105.19	novel	2011	6	NA	NA	200	-1101	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGGTAATAAGGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	128290942	128296165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_128290971_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295850
ENSMUSG00000042105.19_128293534_128296351_1	chr7	+	734	4	NIC	ENSMUSG00000042105.19	novel	2011	6	NA	NA	2791	-915	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAGGCAGTCGGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	128293533	128296351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_128293550_128293977_128294107_128295368_128295457_128295850
ENSMUSG00000042105.19_128294005_128296366_1	chr7	+	710	3	ISM	ENSMUSG00000042105.19	ENST00000637174.1	2011	6	3262	900	3262	-900	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTGCCAGCAGTATC	NA	NA	NA	NA	NA	NA	NA	NA	128294004	128296366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_128294107_128295368_128295461_128295850
ENSMUSG00000042105.19_128294051_128296423_1	chr7	+	721	3	ISM	ENSMUSG00000042105.19	ENST00000637174.1	2011	6	3308	843	3308	-843	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGGAAGTGAACTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	128294050	128296423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_128294107_128295368_128295461_128295850
ENSMUSG00000042109.9_81820993_81834978_1	chr15	+	2293	4	FSM	ENSMUSG00000042109.9	ENSMUST00000038757.8	2490	4	33	164	33	-164	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCACCTTGAGGCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	81820992	81834978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_81821189_81830831_81831134_81832774_81832898_81833306
ENSMUSG00000042109.9_81830830_81835142_1	chr15	+	2263	3	ISM	ENSMUSG00000042109.9	ENSMUST00000038757.8	2490	4	9870	0	9870	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTTGAGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	81830829	81835142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81831134_81832774_81832898_81833306
ENSMUSG00000042115.5_132227189_132230362_1	chr1	+	306	2	NNC	ENSMUSG00000042115.5	novel	4269	5	NA	NA	825	-4733	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCATGCCCACCCCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	132227188	132230362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_132227395_132230262
ENSMUSG00000042116.4_155855148_155857250_1	chr4	-	418	2	FSM	ENSMUSG00000042116.4	ENST00000338660.5	794	2	79	297	79	-297	multi-exon	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAACTATCCTCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	155857250	155855147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_155855481_155857165
ENSMUSG00000042118.8_93793500_93805845_1	chr13	-	790	5	NNC	ENSMUSG00000042118.8	novel	809	5	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCTGTCTTCAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	93805845	93793499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_93793647_93798809_93799039_93799653_93799837_93800181_93800330_93805762
ENSMUSG00000042118.8_93793500_93805845_2	chr13	-	796	5	FSM	ENSMUSG00000042118.8	ENST00000521567.1	809	5	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCTGTCTTCAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	93805845	93793499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_93793653_93798809_93799039_93799653_93799837_93800181_93800330_93805762
ENSMUSG00000042118.8_93793500_93805845_3	chr13	-	790	5	NNC	ENSMUSG00000042118.8	novel	809	5	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCTGTCTTCAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	93805845	93793499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_93793653_93798809_93799039_93799653_93799837_93800187_93800330_93805762
ENSMUSG00000042138.10_37400317_37435477_1	chr9	+	2466	4	FSM	ENSMUSG00000042138.10	ENST00000674284.1	2485	4	20	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGGTGTGCTAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	37400316	37435477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_37401130_37428668_37428769_37430022_37430084_37433985
ENSMUSG00000042138.10_37400317_37435477_2	chr9	+	2458	4	NNC	ENSMUSG00000042138.10	novel	2485	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGGTGTGCTAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	37400316	37435477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_37401130_37428668_37428769_37430022_37430084_37433993
ENSMUSG00000042148.9_63854349_63867086_1	chr11	-	1023	2	ISM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	103206	896	103203	-896	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACCACACATTCCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	63867086	63854348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_63855355_63867069
ENSMUSG00000042148.9_63854408_63867150_1	chr11	-	1028	2	ISM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	103142	955	103139	-955	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCTTCTCTGCCAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	63867150	63854407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_63855355_63867069
ENSMUSG00000042148.9_63854660_63936074_1	chr11	-	1021	4	ISM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	34218	1207	34215	-1207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCCTCCAGCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	63936074	63854659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052
ENSMUSG00000042148.9_63854717_63936139_1	chr11	-	1029	4	ISM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	34153	1264	34150	-1264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	63936139	63854716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052
ENSMUSG00000042148.9_63854859_63962482_1	chr11	-	1064	5	ISM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	7810	1406	7807	-1406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGATTCTGGCAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	63962482	63854858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343
ENSMUSG00000042148.9_63854940_63962520_1	chr11	-	1021	5	ISM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	7772	1487	7769	-1487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTCTGTGGGGAACATGAG	NA	NA	NA	NA	NA	NA	NA	NA	63962520	63854939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343
ENSMUSG00000042148.9_63855052_63964405_1	chr11	-	1094	6	ISM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	5887	1599	5884	-1599	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTCTGCAGCCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	63964405	63855051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362
ENSMUSG00000042148.9_63855178_63964462_1	chr11	-	1025	6	ISM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	5830	1725	5827	-1725	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCCCCGGTCCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	63964462	63855177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362
ENSMUSG00000042148.9_63855286_63970294_1	chr11	-	1084	7	FSM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	-2	1833	-2	-1833	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGTGAAGACTACTCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	63970294	63855285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
ENSMUSG00000042148.9_63962560_63964496_1	chr11	-	237	2	ISM	ENSMUSG00000042148.9	ENST00000429152.6	598	3	5793	228	5793	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACGAGGATGAGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	63964496	63962559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_63962663_63964362
ENSMUSG00000042167.7_93282791_93312320_1	chr13	-	2298	11	ISM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	16471	0	16471	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTGAGGTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	93312320	93282790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205
ENSMUSG00000042167.7_93282791_93322984_1	chr13	-	2788	14	ISM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	5909	1	5807	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTGAGGTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	93322984	93282790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810
ENSMUSG00000042167.7_93282791_93328681_1	chr13	-	2863	15	NNC	ENSMUSG00000042167.7	novel	3081	15	NA	NA	110	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTGAGGTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	93328681	93282790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308335_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ENSMUSG00000042167.7_93282993_93328799_1	chr13	-	2784	15	FSM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	94	203	-8	-202	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGTTTTAACTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	93328799	93282992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ENSMUSG00000042167.7_93283042_93328893_1	chr13	-	2829	15	FSM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	0	252	0	-251	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGTCAGTACCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	93328893	93283041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ENSMUSG00000042178.7_127836529_127839879_1	chr7	+	1966	3	ISM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	0	4393	0	-4393	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGCAAGTTACAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	127836528	127839879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127837762_127839053_127839162_127839254
ENSMUSG00000042178.7_127836694_127839971_1	chr7	+	1893	3	ISM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	165	4301	165	-4301	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCCTGGGACTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	127836693	127839971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127837762_127839053_127839162_127839254
ENSMUSG00000042178.7_127836848_127841424_1	chr7	+	1882	4	ISM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	319	2848	319	-2848	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGATGCCAGAGCCATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	127836847	127841424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127837762_127839053_127839162_127839254_127840042_127841351
ENSMUSG00000042178.7_127836974_127841558_1	chr7	+	1890	4	ISM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	445	2714	445	-2714	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTGTTGTCACGCT	NA	NA	NA	NA	NA	NA	NA	NA	127836973	127841558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127837762_127839053_127839162_127839254_127840042_127841351
ENSMUSG00000042178.7_127837314_127842572_1	chr7	+	1901	5	ISM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	785	1700	785	-1700	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCACCTGCTGCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	127837313	127842572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127837762_127839053_127839162_127839254_127840042_127841351_127841849_127842511
ENSMUSG00000042178.7_127837660_127843479_1	chr7	+	1910	6	FSM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	1131	793	1131	-793	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCAGCGGGCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	127837659	127843479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_127837762_127839053_127839162_127839254_127840042_127841351_127841849_127842511_127842645_127843196
ENSMUSG00000042178.7_127839376_127843790_1	chr7	+	1890	4	ISM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	2847	482	2847	-482	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCGGAGTCAGTGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	127839375	127843790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127840042_127841351_127841849_127842511_127842645_127843196
ENSMUSG00000042178.7_127839610_127844011_1	chr7	+	1877	4	ISM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	3081	261	3081	-261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCATCCCTGGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	127839609	127844011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127840042_127841351_127841849_127842511_127842645_127843196
ENSMUSG00000042179.7_58718334_58729618_1	chr19	+	1296	10	ISM	ENSMUSG00000042179.7	ENSMUST00000048644.6	1619	13	1015	2983	-73	-74	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAACCCAAGTTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	58718333	58729618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_58718564_58718906_58719033_58720455_58720591_58721787_58721897_58723074_58723195_58723304_58723425_58725422_58725542_58726577_58726708_58728877_58728987_58729520
ENSMUSG00000042179.7_58718928_58729692_1	chr19	+	1114	9	NNC	ENSMUSG00000042179.7	novel	1301	10	NA	NA	521	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1128	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTCCTTTGCTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	58718927	58729692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_58719033_58720455_58720591_58721787_58721897_58723074_58723195_58723304_58723420_58725422_58725542_58726577_58726708_58728877_58728987_58729520
ENSMUSG00000042195.10_53679043_53705186_1	chr9	+	201	2	ISM	ENSMUSG00000042195.10	ENST00000525071.5	1502	8	171	19253	171	-19253	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCAGTATTTGGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	53679042	53705186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_53679179_53705121
ENSMUSG00000042195.10_53679090_53705240_1	chr9	+	208	2	ISM	ENSMUSG00000042195.10	ENST00000525071.5	1502	8	218	19199	218	-19199	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCAATTACTGCTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	53679089	53705240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_53679179_53705121
ENSMUSG00000042195.10_53679148_53705283_1	chr9	+	193	2	ISM	ENSMUSG00000042195.10	ENST00000525071.5	1502	8	276	19156	276	-19156	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTTTCAGTCAGGTACGT	NA	NA	NA	NA	NA	NA	NA	NA	53679147	53705283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_53679179_53705121
ENSMUSG00000042195.10_53705244_53713920_1	chr9	+	201	3	ISM	ENSMUSG00000042195.10	ENST00000525071.5	1502	8	26372	10519	26372	-10519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTGTTGATGGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	53705243	53713920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_53705298_53708294_53708423_53713901
ENSMUSG00000042195.10_53708397_53715343_1	chr9	+	200	3	ISM	ENSMUSG00000042195.10	ENST00000525071.5	1502	8	29525	9096	29525	-9096	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGACATCTTAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	53708396	53715343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_53708423_53713901_53714062_53715329
ENSMUSG00000042195.10_53718179_53724146_1	chr9	+	208	2	ISM	ENSMUSG00000042195.10	ENST00000525071.5	1502	8	39307	293	39307	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCCCCCAGAAAGCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	53718178	53724146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_53718314_53724073
ENSMUSG00000042195.10_53718240_53724191_1	chr9	+	192	2	ISM	ENSMUSG00000042195.10	ENST00000525071.5	1502	8	39368	248	39368	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACAATTTGGGACTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	53718239	53724191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_53718314_53724073
ENSMUSG00000042195.10_53718294_53724244_1	chr9	+	191	2	ISM	ENSMUSG00000042195.10	ENST00000525071.5	1502	8	39422	195	39422	-195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTTGTAGCTGGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	53718293	53724244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_53718314_53724073
ENSMUSG00000042198.13_3941261_3942741_1	chr4	+	115	2	FSM	ENSMUSG00000042198.13	ENST00000519367.1	213	2	20	78	20	-78	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCATGGATGAAAATAACTA	NA	NA	NA	NA	NA	NA	NA	NA	3941260	3942741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_3941312_3942677
ENSMUSG00000042202.16_155694660_155702217_2	chr4	+	527	4	FSM	ENSMUSG00000042202.16	ENST00000643943.1	655	4	128	0	128	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGGAACATTAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	155694659	155702217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155694777_155694957_155695094_155696072_155696201_155702071
ENSMUSG00000042202.16_155694660_155702217_3	chr4	+	522	4	NNC	ENSMUSG00000042202.16	novel	655	4	NA	NA	128	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGGAACATTAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	155694659	155702217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_155694772_155694957_155695094_155696072_155696201_155702071
ENSMUSG00000042207.18_134487909_134541751_1	chr1	+	2580	16	ISM	ENSMUSG00000042207.18	ENST00000367264.7	6038	27	2	18507	0	-17509	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAATGCAGAAAGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	134487908	134541751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521289_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624
ENSMUSG00000042207.18_134488079_134525418_1	chr1	+	781	6	ISM	ENSMUSG00000042207.18	ENST00000648469.1	5383	26	166	34401	149	-33842	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCACTGCGGTGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	134488078	134525418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134488281_134512891_134512970_134516514_134516686_134521066_134521202_134523537_134523635_134525320
ENSMUSG00000042207.18_134488183_134526874_1	chr1	+	766	7	ISM	ENSMUSG00000042207.18	ENST00000648469.1	5383	26	270	32945	253	-32386	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTACCACACCTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	134488182	134526874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134488281_134512891_134512970_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797
ENSMUSG00000042207.18_134488199_134543990_1	chr1	+	2503	18	ISM	ENSMUSG00000042207.18	ENST00000367264.7	6038	27	292	16268	269	-15270	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGCTGTATGCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	134488198	134543990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521289_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926
ENSMUSG00000042207.18_134512894_134545457_1	chr1	+	2498	18	ISM	ENSMUSG00000042207.18	ENST00000367264.7	6038	27	24987	14801	24964	-13803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGCAAAGCCAAAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	134512893	134545457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134512970_134515659_134515783_134516514_134516686_134521066_134521289_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429
ENSMUSG00000042207.18_134515715_134545596_1	chr1	+	2506	17	ISM	ENSMUSG00000042207.18	ENST00000367264.7	6038	27	27808	14662	27785	-13664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAAGAGGTTCAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	134515714	134545596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134515783_134516514_134516686_134521066_134521289_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429
ENSMUSG00000042207.18_134516579_134545697_1	chr1	+	2475	16	ISM	ENSMUSG00000042207.18	ENST00000367264.7	6038	27	28672	14561	28649	-13563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGAGAAAGCTATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	134516578	134545697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134516686_134521066_134521289_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429
ENSMUSG00000042207.18_134521092_134547338_1	chr1	+	2472	16	ISM	ENSMUSG00000042207.18	ENST00000367264.7	6038	27	33185	12920	33162	-11922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAGGAGATCCCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	134521091	134547338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134521289_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297
ENSMUSG00000042207.18_134521216_134548618_1	chr1	+	2484	17	ISM	ENSMUSG00000042207.18	ENST00000367264.7	6038	27	33309	11640	33286	-10642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTGCAAGAGGCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	134521215	134548618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134521289_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580
ENSMUSG00000042207.18_134525320_134549688_1	chr1	+	2473	16	ISM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	37390	9572	37390	-9572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACATTGGCCTTTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	134525319	134549688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672
ENSMUSG00000042207.18_134525368_134549750_1	chr1	+	2487	16	ISM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	37438	9510	37438	-9510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAGAGAAGCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	134525367	134549750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672
ENSMUSG00000042207.18_134526864_134552515_1	chr1	+	2506	16	ISM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	38934	6745	38934	-6745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAATTGCTGTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	134526863	134552515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448
ENSMUSG00000042207.18_134528403_134552626_1	chr1	+	2493	15	ISM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	40473	6634	40473	-6634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTGTGTGGCAGCACCC	NA	NA	NA	NA	NA	NA	NA	NA	134528402	134552626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448
ENSMUSG00000042207.18_134528468_134552674_1	chr1	+	2476	15	ISM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	40538	6586	40538	-6586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCCTCACTGTCGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	134528467	134552674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448
ENSMUSG00000042207.18_134530217_134552839_1	chr1	+	2588	14	ISM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	42287	6421	42287	-6421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGAATCTAAAACTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	134530216	134552839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448
ENSMUSG00000042207.18_134530295_134552839_1	chr1	+	2510	14	ISM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	42365	6421	42365	-6421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGAATCTAAAACTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	134530294	134552839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448
ENSMUSG00000042207.18_134532313_134555047_1	chr1	+	2465	14	ISM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	44383	4213	44383	-4213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGACAACAGAACCTCATA	NA	NA	NA	NA	NA	NA	NA	NA	134532312	134555047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002
ENSMUSG00000042207.18_134533550_134556425_1	chr1	+	2474	14	ISM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	45620	2835	45620	-2835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTAAGCCAAGCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	134533549	134556425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335
ENSMUSG00000042207.18_134535478_134558234_1	chr1	+	2487	14	ISM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	47548	1026	47548	-1026	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAAGAGAAGGCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	134535477	134558234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170
ENSMUSG00000042207.18_134536745_134558414_1	chr1	+	2457	13	ISM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	48815	846	48815	-846	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCGAACAGGAGGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	134536744	134558414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170
ENSMUSG00000042207.18_134540977_134559026_1	chr1	+	2482	13	ISM	ENSMUSG00000042207.18	ENST00000648469.1	5383	26	53064	793	53047	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGTGTCTCTCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	134540976	134559026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUSG00000042207.18_134541027_134559078_1	chr1	+	2484	13	ISM	ENSMUSG00000042207.18	ENST00000648469.1	5383	26	53114	741	53097	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTACTGGGAAGGACGCAC	NA	NA	NA	NA	NA	NA	NA	NA	134541026	134559078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUSG00000042207.18_134541073_134559133_1	chr1	+	2493	13	ISM	ENSMUSG00000042207.18	ENST00000648469.1	5383	26	53160	686	53143	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTAATTCAGGACTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	134541072	134559133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUSG00000042207.18_134541668_134559260_1	chr1	+	2542	12	ISM	ENSMUSG00000042207.18	ENST00000648469.1	5383	26	53755	559	53738	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAACAACTA	NA	NA	NA	NA	NA	NA	NA	NA	134541667	134559260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUSG00000042207.18_134541722_134559263_1	chr1	+	2491	12	ISM	ENSMUSG00000042207.18	ENST00000648469.1	5383	26	53809	556	53792	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAACAACTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	134541721	134559263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUSG00000042207.18_134543925_134559418_1	chr1	+	2469	10	ISM	ENSMUSG00000042207.18	ENST00000648469.1	5383	26	56012	401	55995	158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGTACTTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	134543924	134559418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUSG00000042207.18_134543968_134559478_1	chr1	+	2486	10	ISM	ENSMUSG00000042207.18	ENST00000648469.1	5383	26	56055	341	56038	218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGGGGCACCAGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	134543967	134559478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUSG00000042207.18_134545470_134559586_1	chr1	+	2480	9	ISM	ENSMUSG00000042207.18	ENST00000648469.1	5383	26	57557	233	57540	-233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCCCCTTTTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	134545469	134559586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUSG00000042207.18_134545608_134559728_1	chr1	+	2484	9	ISM	ENSMUSG00000042207.18	ENST00000648469.1	5383	26	57695	91	57678	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTCTAGTTTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	134545607	134559728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUSG00000042207.18_134545682_134559803_1	chr1	+	2485	9	ISM	ENSMUSG00000042207.18	ENST00000648469.1	5383	26	57769	16	57752	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTATTTTGGCTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	134545681	134559803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUSG00000042207.18_134547349_134559948_1	chr1	+	2475	8	ISM	ENSMUSG00000042207.18	ENST00000648469.1	5383	26	59436	-129	59419	129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCCCTTCCACCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	134547348	134559948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUSG00000042207.18_134547402_134559998_1	chr1	+	2472	8	ISM	ENSMUSG00000042207.18	ENST00000648469.1	5383	26	59489	-179	59472	179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTTCCCAGGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	134547401	134559998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUSG00000042207.18_134548685_134560146_1	chr1	+	2481	7	ISM	ENSMUSG00000042207.18	ENST00000367264.7	6038	27	60778	112	60755	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCAGTAAGCCCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	134548684	134560146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUSG00000042207.18_134548736_134560199_1	chr1	+	2483	7	ISM	ENSMUSG00000042207.18	ENST00000367264.7	6038	27	60829	59	60806	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACAGCTCTCCTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	134548735	134560199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUSG00000042210.18_106317250_106321373_1	chr9	-	439	2	FSM	ENSMUSG00000042210.18	ENST00000491470.1	546	2	110	-3	110	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTTGTGTTTCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	106321373	106317249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_106317604_106321288
ENSMUSG00000042210.18_106317250_106324762_1	chr9	-	1141	7	FSM	ENSMUSG00000042210.18	ENSMUST00000048685.13	1256	7	115	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTTGTGTTTCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	106324762	106317249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322851_106322969_106323029_106324729
ENSMUSG00000042211.8_62637226_62674031_1	chr18	-	3334	20	FSM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	56	93	56	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCCAGAGCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	62674031	62637225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951
ENSMUSG00000042211.8_62637226_62674083_1	chr18	-	3386	20	FSM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	4	93	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCCAGAGCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	62674083	62637225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951
ENSMUSG00000042211.8_62643812_62650054_1	chr18	-	193	3	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	24033	6679	24033	-6586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTGCCCCAAGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	62650054	62643811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_62643884_62644084_62644186_62650034
ENSMUSG00000042216.14_113392688_113411535_1	chr5	-	1276	7	ISM	ENSMUSG00000042216.14	ENSMUST00000057209.12	4339	16	16932	1593	16918	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATATCCCCCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	113411535	113392687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114
ENSMUSG00000042216.14_113392765_113411611_1	chr5	-	1275	7	ISM	ENSMUSG00000042216.14	ENSMUST00000057209.12	4339	16	16856	1670	16842	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCCACTGGGCAGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	113411611	113392764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114
ENSMUSG00000042216.14_113392881_113413780_1	chr5	-	1286	8	ISM	ENSMUSG00000042216.14	ENSMUST00000057209.12	4339	16	14687	1786	14673	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAAGTGAGGATCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	113413780	113392880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744
ENSMUSG00000042216.14_113398742_113414191_1	chr5	-	1276	8	ISM	ENSMUSG00000042216.14	ENSMUST00000057209.12	4339	16	14276	7647	14262	-6058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTACCAAGGGGGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	113414191	113398741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152
ENSMUSG00000042216.14_113398786_113414250_1	chr5	-	1291	8	ISM	ENSMUSG00000042216.14	ENSMUST00000057209.12	4339	16	14217	7691	14203	-6102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGAGAACAATATGGACT	NA	NA	NA	NA	NA	NA	NA	NA	113414250	113398785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152
ENSMUSG00000042216.14_113398845_113414294_1	chr5	-	1276	8	ISM	ENSMUSG00000042216.14	ENSMUST00000057209.12	4339	16	14173	7750	14159	-6161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCCCACTACGTGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	113414294	113398844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152
ENSMUSG00000042216.14_113400864_113416695_1	chr5	-	1384	8	ISM	ENSMUSG00000042216.14	ENSMUST00000057209.12	4339	16	11772	9769	11758	-8180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGACTCCGCCCTGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	113416695	113400863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566
ENSMUSG00000042216.14_113403171_113421503_1	chr5	-	1293	8	ISM	ENSMUSG00000042216.14	ENSMUST00000057209.12	4339	16	6964	12076	6950	10369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGGAGGCGCCATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	113421503	113403170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444
ENSMUSG00000042216.14_113407985_113423952_1	chr5	-	1288	8	ISM	ENSMUSG00000042216.14	ENSMUST00000057209.12	4339	16	4515	16890	4501	5555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGTGACCGCAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	113423952	113407984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899
ENSMUSG00000042216.14_113411198_113425436_1	chr5	-	1298	8	ISM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	11331	18514	3017	2342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGCCCTGGCTTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	113425436	113411197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113425374
ENSMUSG00000042216.14_113411339_113427014_1	chr5	-	1276	9	ISM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	9753	18655	1439	2201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTATCCCTGGCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	113427014	113411338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113425374_113425540_113426998
ENSMUSG00000042216.14_113411392_113427076_1	chr5	-	1285	9	ISM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	9691	18708	1377	2148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGATAGCCTTGAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	113427076	113411391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113425374_113425540_113426998
ENSMUSG00000042216.14_113411448_113427202_1	chr5	-	1355	9	ISM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	9565	18764	1251	2092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCAGCGAAGCCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	113427202	113411447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113425374_113425540_113426998
ENSMUSG00000042216.14_113411592_113428262_1	chr5	-	1374	11	ISM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	8505	18908	191	1948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGACACCCTTCCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	113428262	113411591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113425374_113425540_113426998_113427132_113427322_113427487_113428192
ENSMUSG00000042216.14_113413743_113430582_1	chr5	-	1388	11	ISM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	6185	21059	-2115	-203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTCTGAGGCTCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	113430582	113413742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113425374_113425540_113426998_113427132_113427322_113427487_113428192_113428261_113430457
ENSMUSG00000042216.14_113414153_113432881_1	chr5	-	1353	11	ISM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	3886	21469	3886	-613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGGACAGCTGGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	113432881	113414152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113425374_113425540_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845
ENSMUSG00000042216.14_113414268_113432924_1	chr5	-	1281	11	ISM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	3843	21584	3843	-728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACAGAGGGAGCGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	113432924	113414267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113425374_113425540_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845
ENSMUSG00000042216.14_113416572_113433164_1	chr5	-	1281	11	ISM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	3603	23888	3603	-3032	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGTTAGTTACCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	113433164	113416571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113425374_113425540_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144
ENSMUSG00000042216.14_113416632_113433221_1	chr5	-	1278	11	ISM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	3546	23948	3546	-3092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCAGTGTGGCCCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	113433221	113416631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113425374_113425540_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144
ENSMUSG00000042216.14_113416678_113433290_1	chr5	-	1301	11	ISM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	3477	23994	3477	-3138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGCGTCTCATCTACTA	NA	NA	NA	NA	NA	NA	NA	NA	113433290	113416677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113425374_113425540_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144
ENSMUSG00000042216.14_113421445_113433560_1	chr5	-	1351	11	ISM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	3207	28761	3207	373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTGGGTTTGTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	113433560	113421444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113421591_113422157_113422223_113423899_113424039_113425374_113425540_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492
ENSMUSG00000042216.14_113421551_113434687_1	chr5	-	1292	12	ISM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	2080	28867	2080	267	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCAGCCCTGGTCAATC	NA	NA	NA	NA	NA	NA	NA	NA	113434687	113421550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113421591_113422157_113422223_113423899_113424039_113425374_113425540_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640
ENSMUSG00000042216.14_113422000_113428291_1	chr5	-	758	5	FSM	ENSMUSG00000042216.14	ENSMUST00000112324.2	1102	5	162	182	162	-182	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGTATCTCTCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	113428291	113421999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192
ENSMUSG00000042216.14_113422157_113434793_1	chr5	-	1359	11	ISM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	1974	29473	1974	-339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGCACATCCCCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	113434793	113422156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113422223_113423899_113424039_113425374_113425540_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640
ENSMUSG00000042216.14_113423932_113435106_1	chr5	-	1277	11	ISM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	1661	31248	1661	-2114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGCTCAACCAATGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	113435106	113423931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113424039_113425374_113425540_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640_113434794_113435090
ENSMUSG00000042216.14_113425477_113436744_1	chr5	-	1270	11	ISM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	23	32793	23	-3659	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGGGCCAGTCCATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	113436744	113425476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_113425540_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640_113434794_113435090_113435254_113436689
ENSMUSG00000042228.15_3743199_3756428_1	chr4	+	738	6	ISM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	65072	35184	65072	-35184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGGTCACCAAGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	3743198	3756428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300
ENSMUSG00000042228.15_3745580_3781041_1	chr4	+	739	6	ISM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	67453	10571	67453	-10571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAACGAGTACACAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	3745579	3781041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912
ENSMUSG00000042228.15_3746750_3783046_1	chr4	+	752	6	ISM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	68623	8566	68623	-8566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTTCGGAATTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	3746749	3783046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972
ENSMUSG00000042228.15_3748745_3789872_1	chr4	+	746	6	ISM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	70618	1740	70618	-1740	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACTACTTACAGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	3748744	3789872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ENSMUSG00000042228.15_3756309_3789973_1	chr4	+	770	5	ISM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	78182	1639	78182	-1639	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGAAAAGCAGCCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	3756308	3789973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ENSMUSG00000042228.15_3783037_3790398_1	chr4	+	725	2	ISM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	104910	1214	104910	-1214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTTGATTCCTCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	3783036	3790398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_3783105_3789741
ENSMUSG00000042229.10_134422386_134434451_1	chr1	+	800	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	0	2061	0	-2061	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGAAACTCCACCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	134422385	134434451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_134422548_134433813
ENSMUSG00000042229.10_134422495_134434505_1	chr1	+	745	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	109	2007	109	-2007	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAATCCTAGTTTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	134422494	134434505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_134422548_134433813
ENSMUSG00000042272.18_77016374_77036615_1	chr2	-	2291	9	NNC	ENSMUSG00000042272.18	novel	8990	18	NA	NA	59497	-33	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTAATTTTAATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	77036615	77016373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027161_77027327_77028632_77028748_77029209_77029405_77036549
ENSMUSG00000042272.18_77016524_77042790_1	chr2	-	2280	10	ISM	ENSMUSG00000042272.18	ENSMUST00000102660.8	8990	18	53322	5840	53322	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATATTTAATATCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	77042790	77016523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703
ENSMUSG00000042272.18_77016638_77042900_1	chr2	-	2276	10	ISM	ENSMUSG00000042272.18	ENSMUST00000102660.8	8990	18	53212	5954	53212	261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCTGAAGACACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	77042900	77016637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703
ENSMUSG00000042272.18_77016899_77048496_1	chr2	-	2248	13	ISM	ENSMUSG00000042272.18	ENSMUST00000102660.8	8990	18	47616	6215	47616	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTATTTAATTTGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	77048496	77016898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432
ENSMUSG00000042272.18_77017373_77110992_1	chr2	-	2302	18	FSM	ENSMUSG00000042272.18	ENSMUST00000102659.2	2720	18	-56	474	-56	-474	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGCCTCCTTTCTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	77110992	77017372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
ENSMUSG00000042272.18_77017523_77111126_1	chr2	-	2286	18	FSM	ENSMUSG00000042272.18	ENSMUST00000102659.2	2720	18	-190	624	50	-624	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGCAGCAGCTGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	77111126	77017522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
ENSMUSG00000042286.14_30862159_30862621_1	chr14	-	286	3	ISM	ENSMUSG00000042286.14	ENST00000321725.10	7577	66	22763	1185	22763	-1185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACCTACAAGACACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	30862621	30862158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30862225_30862312_30862423_30862511
ENSMUSG00000042289.12_127399808_127402138_1	chr7	+	960	7	FSM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	32	836	22	-836	multi-exon	TRUE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCTAGTGCTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	127399807	127402138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
ENSMUSG00000042289.12_127400311_127402253_1	chr7	+	932	6	ISM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	535	721	223	-721	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTGTCAGTACCAACAA	NA	NA	NA	NA	NA	NA	NA	NA	127400310	127402253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
ENSMUSG00000042289.12_127400362_127402309_1	chr7	+	937	6	ISM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	586	665	274	-665	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAAGAGAGCAGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	127400361	127402309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
ENSMUSG00000042289.12_127400718_127402446_1	chr7	+	932	5	ISM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	942	528	630	-528	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTGCCTTTTGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	127400717	127402446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
ENSMUSG00000042289.12_127401005_127402576_1	chr7	+	992	4	ISM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	1229	398	917	-398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGAAAGGCCTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	127401004	127402576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127401115_127401185_127401286_127401407_127401571_127401957
ENSMUSG00000042289.12_127401406_127402691_1	chr7	+	899	2	ISM	ENSMUSG00000042289.12	ENSMUST00000106272.8	1725	7	1620	283	1318	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGACTCCAGAGATCTTA	NA	NA	NA	NA	NA	NA	NA	NA	127401405	127402691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127401571_127401957
ENSMUSG00000042289.12_127401477_127402843_1	chr7	+	980	2	ISM	ENSMUSG00000042289.12	ENSMUST00000106272.8	1725	7	1691	131	1389	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATCTGAAGAAATCAATG	NA	NA	NA	NA	NA	NA	NA	NA	127401476	127402843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_127401571_127401957
ENSMUSG00000042302.15_21956782_22045666_1	chr11	-	1513	11	ISM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	190206	1	190172	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTAGCCTTGGACCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	22045666	21956781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006920_22009136_22009262_22018358_22018507_22039524_22039669_22045317
ENSMUSG00000042302.15_21956841_22045725_1	chr11	-	1513	11	ISM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	190147	60	190113	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCTGGAGCAAAACAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	22045725	21956840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006920_22009136_22009262_22018358_22018507_22039524_22039669_22045317
ENSMUSG00000042302.15_21957168_22045884_1	chr11	-	1556	10	ISM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	189988	387	189954	-387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAACAGCTCCTGCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	22045884	21957167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006920_22009136_22009262_22018358_22018507_22039524_22039669_22045317
ENSMUSG00000042302.15_22006521_22050470_1	chr11	-	1594	7	NIC	ENSMUSG00000042302.15	novel	3771	22	NA	NA	185368	-49740	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTAATTTTTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	22050470	22006520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_-_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421
ENSMUSG00000042302.15_22006842_22051150_1	chr11	-	1525	7	ISM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	184722	50061	184688	-50061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCACAGTCAGAAAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	22051150	22006841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_22006920_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051
ENSMUSG00000042302.15_22009209_22087902_1	chr11	-	1520	7	ISM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	147970	52428	147936	-52428	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGGTGGCAAACTTACT	NA	NA	NA	NA	NA	NA	NA	NA	22087902	22009208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837
ENSMUSG00000042302.15_22018359_22088057_1	chr11	-	1622	6	ISM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	147815	61578	147781	-61578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCTAAGGAATCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	22088057	22018358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837
ENSMUSG00000042302.15_22039525_22096484_1	chr11	-	1496	6	ISM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	139388	82744	139354	-82744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGAACACGGGTTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	22096484	22039524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462
ENSMUSG00000042302.15_22039572_22096546_1	chr11	-	1511	6	ISM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	139326	82791	139292	-82791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGGCAGCGCAGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	22096546	22039571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462
ENSMUSG00000042302.15_22039613_22096606_1	chr11	-	1530	6	ISM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	139266	82832	139232	-82832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGCAAGAAGAGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	22096606	22039612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462
ENSMUSG00000042302.15_22045406_22101104_1	chr11	-	1518	6	ISM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	134768	88625	134734	-88625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTTCTCTGAGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	22101104	22045405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096701_22101066
ENSMUSG00000042302.15_22045534_22119078_1	chr11	-	1519	7	ISM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	116794	88753	116760	-88753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGGAAAATGGAGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	22119078	22045533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096701_22101066_22101190_22119034
ENSMUSG00000042302.15_22045591_22119136_1	chr11	-	1520	7	ISM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	116736	88810	116702	-88810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTCTCAGCTTACGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	22119136	22045590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096701_22101066_22101190_22119034
ENSMUSG00000042302.15_22045703_22123006_1	chr11	-	1628	8	ISM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	112866	88922	112832	-88922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGTACTGATTCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	22123006	22045702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096701_22101066_22101190_22119034_22119175_22122824
ENSMUSG00000042302.15_22046069_22235529_1	chr11	-	1512	12	ISM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	343	89288	309	-89288	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTAAATGTGGTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	22235529	22046068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096701_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487
ENSMUSG00000042302.15_22046114_22235586_1	chr11	-	1524	12	ISM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	286	89333	252	-89333	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATGACTTATCTCTATC	NA	NA	NA	NA	NA	NA	NA	NA	22235586	22046113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096701_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487
ENSMUSG00000042302.15_22046169_22235636_1	chr11	-	1519	12	ISM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	236	89388	202	-89388	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTTACTGGAACCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	22235636	22046168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096701_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487
ENSMUSG00000042302.15_22051128_22235838_1	chr11	-	1565	10	ISM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	34	94347	0	-94347	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCAACTTTACCACATCG	NA	NA	NA	NA	NA	NA	NA	NA	22235838	22051127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_22051231_22087837_22088058_22096462_22096701_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487
ENSMUSG00000042305.13_134275648_134282579_1	chr1	-	703	4	ISM	ENSMUSG00000042305.13	ENSMUST00000049470.11	3149	8	7138	1813	7029	103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCTGTTTGGGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	134282579	134275647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398
ENSMUSG00000042305.13_134275802_134283404_1	chr1	-	656	5	ISM	ENSMUSG00000042305.13	ENSMUST00000049470.11	3149	8	6313	1967	6204	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGGCTCTTTGACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	134283404	134275801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297
ENSMUSG00000042305.13_134275834_134282497_1	chr1	-	431	4	ISM	ENSMUSG00000042305.13	ENST00000503901.1	1120	8	7111	83	7111	-83	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCAAGTCGTCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	134282497	134275833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134275933_134277820_134277969_134280088_134280174_134282398
ENSMUSG00000042305.13_134277821_134283404_1	chr1	-	521	4	ISM	ENSMUSG00000042305.13	ENST00000503901.1	1120	8	6204	2070	6204	-2070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAGGACTCAGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	134283404	134277820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134277969_134280088_134280174_134282398_134282580_134283297
ENSMUSG00000042305.13_134277821_134288598_1	chr1	-	679	5	ISM	ENSMUSG00000042305.13	ENSMUST00000049470.11	3149	8	1119	3986	1010	-2070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAGGACTCAGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	134288598	134277820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494
ENSMUSG00000042305.13_134282448_134289568_1	chr1	-	616	5	ISM	ENSMUSG00000042305.13	ENST00000503901.1	1120	8	40	6697	40	-6697	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCAGCCATTCCGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	134289568	134282447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ENSMUSG00000042305.13_134282507_134289679_1	chr1	-	668	5	ISM	ENSMUSG00000042305.13	ENST00000503901.1	1120	8	-71	6756	38	-6756	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGTGATCCGATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	134289679	134282506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ENSMUSG00000042305.13_134282541_134289695_1	chr1	-	650	5	ISM	ENSMUSG00000042305.13	ENST00000503901.1	1120	8	-87	6790	22	-6790	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGAATCCATGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	134289695	134282540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ENSMUSG00000042312.11_90421742_90431714_1	chr3	+	541	4	FSM	ENSMUSG00000042312.11	ENSMUST00000048138.8	715	4	0	174	0	-174	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGAGGTTCAGTGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	90421741	90431714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_90421773_90422064_90422327_90423156_90423350_90431659
ENSMUSG00000042312.11_90422221_90431888_1	chr3	+	528	3	ISM	ENSMUSG00000042312.11	ENSMUST00000048138.8	715	4	479	0	479	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTATTTATTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	90422220	90431888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90422327_90423156_90423350_90431659
ENSMUSG00000042320.18_85134169_85142108_1	chr12	-	1006	3	FSM	ENSMUSG00000042320.18	ENST00000673765.1	1080	3	74	0	74	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCCGGGACTGTTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	85142108	85134168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_85134329_85134683_85134879_85141457
ENSMUSG00000042323.18_30767368_30774278_1	chr14	+	463	4	ISM	ENSMUSG00000042323.18	ENSMUST00000022474.14	4843	29	19901	66626	19900	-66626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTGCTGTTTGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	30767367	30774278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30767383_30768288_30768381_30771994_30772209_30774136
ENSMUSG00000042323.18_30796901_30806887_1	chr14	+	453	4	ISM	ENSMUSG00000042323.18	ENST00000410007.5	4898	29	49434	34036	49433	-34017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTGCCTGTGGTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	30796900	30806887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30796940_30804506_30804693_30806105_30806189_30806742
ENSMUSG00000042323.18_30804646_30809521_1	chr14	+	443	4	ISM	ENSMUSG00000042323.18	ENST00000410007.5	4898	29	57179	31402	57178	-31383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTTGAGCAGCTTCGG	NA	NA	NA	NA	NA	NA	NA	NA	30804645	30809521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30804693_30806105_30806189_30806742_30807007_30809472
ENSMUSG00000042323.18_30828248_30839013_1	chr14	+	460	4	ISM	ENSMUSG00000042323.18	ENST00000410007.5	4898	29	80781	1910	80780	-1891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGGAAGTCCGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	30828247	30839013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30828306_30829065_30829268_30835805_30835962_30838969
ENSMUSG00000042323.18_30829213_30839320_1	chr14	+	446	4	ISM	ENSMUSG00000042323.18	ENST00000410007.5	4898	29	81746	1603	81745	-1584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTCAGTGCTGAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	30829212	30839320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30829268_30835805_30835962_30838969_30839041_30839156
ENSMUSG00000042328.14_112494499_112497282_1	chr5	+	184	2	ISM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	40	28718	40	-28718	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTACCTGTGGGTAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	112494498	112497282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112494551_112497150
ENSMUSG00000042328.14_112494516_112510991_1	chr5	+	196	3	ISM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	57	15009	57	-15009	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATCTCTGATGCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	112494515	112510991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112494551_112497150_112497295_112510974
ENSMUSG00000042328.14_112497148_112511017_1	chr5	+	190	2	ISM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	2689	14983	2689	-14983	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTGGATCAGCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	112497147	112511017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112497295_112510974
ENSMUSG00000042328.14_112497251_112511462_1	chr5	+	203	3	ISM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	2792	14538	2792	-14538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTCAGGAGCACCAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	112497250	112511462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112497295_112510974_112511083_112511411
ENSMUSG00000042328.14_112510974_112511530_1	chr5	+	228	2	ISM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	16515	14470	16515	-14470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTGCAGGCGCTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	112510973	112511530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112511083_112511411
ENSMUSG00000042328.14_112511410_112512463_1	chr5	+	196	2	ISM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	16951	13537	16951	-13537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTCTATAAAGGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	112511409	112512463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112511529_112512386
ENSMUSG00000042328.14_112512387_112518610_1	chr5	+	182	2	NNC	ENSMUSG00000042328.14	novel	1059	9	NA	NA	17928	-7390	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCCCCTGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	112512386	112518610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_112512461_112518502
ENSMUSG00000042328.14_112512433_112522795_1	chr5	+	184	3	ISM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	17974	3205	17974	-3205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCTGCCCAGAGACGAGG	NA	NA	NA	NA	NA	NA	NA	NA	112512432	112522795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112512463_112518506_112518611_112522745
ENSMUSG00000042328.14_112518589_112523247_1	chr5	+	184	3	ISM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	24130	2753	24130	-2753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGCCGGTTTCTGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	112518588	112523247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112518611_112522745_112522879_112523218
ENSMUSG00000042328.14_112522818_112525863_1	chr5	+	209	3	ISM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	28359	137	28359	-137	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGACCTACTTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	112522817	112525863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_112522879_112523218_112523328_112525824
ENSMUSG00000042331.14_61967923_62009244_1	chr11	+	859	2	ISM	ENSMUSG00000042331.14	ENSMUST00000201723.4	2690	6	6	20104	0	-19653	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCAGACACCCCGTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	61967922	62009244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_61968063_62008525
ENSMUSG00000042331.14_61967923_62009287_1	chr11	+	902	2	ISM	ENSMUSG00000042331.14	ENSMUST00000201723.4	2690	6	6	20061	0	-19610	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAAGAGCTCCAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	61967922	62009287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_61968063_62008525
ENSMUSG00000042331.14_62009423_62019176_1	chr11	+	837	2	ISM	ENSMUSG00000042331.14	ENSMUST00000201723.4	2690	6	41506	10172	41500	-9721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCAGCATCGCGCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	62009422	62019176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62010109_62019025
ENSMUSG00000042331.14_62009581_62030139_1	chr11	+	2280	5	ISM	ENSMUSG00000042331.14	ENSMUST00000201723.4	2690	6	41664	-791	41658	790	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAGATATGAGTTAATCT	NA	NA	NA	NA	NA	NA	NA	NA	62009580	62030139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62010109_62019025_62019234_62022655_62022730_62023101_62023308_62028875
ENSMUSG00000042331.14_62009890_62038414_1	chr11	+	874	6	ISM	ENSMUSG00000042331.14	ENST00000679801.1	2901	10	42012	71917	41967	5862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCCACAAGACTCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	62009889	62038414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62010109_62019025_62019234_62022655_62022730_62023101_62023308_62037131_62037278_62038393
ENSMUSG00000042331.14_62009959_62038470_1	chr11	+	861	6	ISM	ENSMUSG00000042331.14	ENST00000679801.1	2901	10	42081	71861	42036	5918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCTGTCTCTCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	62009958	62038470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62010109_62019025_62019234_62022655_62022730_62023101_62023308_62037131_62037278_62038393
ENSMUSG00000042331.14_62010071_62096249_1	chr11	+	813	7	ISM	ENSMUSG00000042331.14	ENST00000679801.1	2901	10	42193	14082	42148	-14012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGCCCTCTGTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	62010070	62096249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62010109_62019025_62019234_62022655_62022730_62023101_62023308_62037131_62037278_62038393_62038495_62096209
ENSMUSG00000042331.14_62019085_62110149_1	chr11	+	892	8	ISM	ENSMUSG00000042331.14	ENST00000679801.1	2901	10	51207	182	51162	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCGTGATGCAGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	62019084	62110149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62019234_62022655_62022730_62023101_62023308_62037131_62037278_62038393_62038495_62096209_62096327_62102469_62102530_62110110
ENSMUSG00000042331.14_62019160_62110261_1	chr11	+	929	8	ISM	ENSMUSG00000042331.14	ENST00000679801.1	2901	10	51282	70	51237	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACCTGCTATGCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	62019159	62110261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62019234_62022655_62022730_62023101_62023308_62037131_62037278_62038393_62038495_62096209_62096327_62102469_62102530_62110110
ENSMUSG00000042331.14_62023100_62030969_1	chr11	+	2302	2	ISM	ENSMUSG00000042331.14	ENSMUST00000201723.4	2690	6	55183	-1621	55177	-1583	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTATTTCATCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	62023099	62030969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62023308_62028875
ENSMUSG00000042331.14_62047400_62110261_1	chr11	+	438	4	ISM	ENSMUSG00000042331.14	ENST00000678019.1	3129	12	113632	70	79477	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACCTGCTATGCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	62047399	62110261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62047467_62052633_62052737_62096209_62096327_62110110
ENSMUSG00000042348.11_114058782_114292301_1	chr13	+	1477	4	ISM	ENSMUSG00000042348.11	ENSMUST00000091201.7	3364	5	127741	1696	127624	489	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATAACAGCCAAAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	114058781	114292301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_114058928_114070599_114070660_114104117_114104327_114291239
ENSMUSG00000042348.11_114104222_114292573_1	chr13	+	1439	2	ISM	ENSMUSG00000042348.11	ENSMUST00000224068.2	1002	4	173064	-761	173064	761	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGTAAAATGTACAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	114104221	114292573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_114104327_114291239
ENSMUSG00000042350.14_84966145_84967523_1	chr12	-	1280	2	ISM	ENSMUSG00000042350.14	ENST00000681099.1	4901	19	30404	1206	30404	-1206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTCAGTCTCCAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	84967523	84966144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84967355_84967453
ENSMUSG00000042350.14_84966298_84968115_1	chr12	-	1317	3	ISM	ENSMUSG00000042350.14	ENST00000681099.1	4901	19	29812	1359	29812	-1359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTGAAGCCACTGGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	84968115	84966297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84967355_84967453_84967630_84968031
ENSMUSG00000042350.14_84966450_84970806_1	chr12	-	1267	5	ISM	ENSMUSG00000042350.14	ENST00000681099.1	4901	19	27121	1511	27121	-1511	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCACTGAAGGAGGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	84970806	84966449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769
ENSMUSG00000042350.14_84966563_84972493_1	chr12	-	1273	6	ISM	ENSMUSG00000042350.14	ENST00000681099.1	4901	19	25434	1624	25434	-1624	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGTCTGCGCTGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	84972493	84966562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467
ENSMUSG00000042350.14_84966867_84974109_1	chr12	-	1284	8	ISM	ENSMUSG00000042350.14	ENST00000681099.1	4901	19	23818	1928	23818	-1928	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTCACTACTTGACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	84974109	84966866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074
ENSMUSG00000042350.14_84967190_84977175_1	chr12	-	1287	11	ISM	ENSMUSG00000042350.14	ENST00000681099.1	4901	19	20752	2251	20752	-2251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGCCACTGACCTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	84977175	84967189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122
ENSMUSG00000042350.14_84967575_84981031_1	chr12	-	1274	12	ISM	ENSMUSG00000042350.14	ENST00000681099.1	4901	19	16896	2636	16896	-2636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGCTTCAGTTTACAACA	NA	NA	NA	NA	NA	NA	NA	NA	84981031	84967574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925
ENSMUSG00000042350.14_84968063_84981137_1	chr12	-	1294	11	ISM	ENSMUSG00000042350.14	ENST00000681099.1	4901	19	16790	3124	16790	-3124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTGGATCCTGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	84981137	84968062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925
ENSMUSG00000042350.14_84970803_84981453_1	chr12	-	1289	10	ISM	ENSMUSG00000042350.14	ENST00000681099.1	4901	19	16474	5864	16474	-5864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGAAAGAGGAGGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	84981453	84970802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343
ENSMUSG00000042350.14_84972557_84981812_1	chr12	-	1259	10	ISM	ENSMUSG00000042350.14	ENST00000681099.1	4901	19	16115	7618	16115	-7618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTGCTTTATCCTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	84981812	84972556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727
ENSMUSG00000042350.14_84973124_84987007_1	chr12	-	1265	10	ISM	ENSMUSG00000042350.14	ENST00000681099.1	4901	19	10920	8185	10920	-8185	internal_fragment	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGGCAAGTGTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	84987007	84973123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933
ENSMUSG00000042350.14_84974682_84988586_1	chr12	-	1268	9	ISM	ENSMUSG00000042350.14	ENST00000681099.1	4901	19	9341	9743	9341	-9743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGCAAGAACTTTGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	84988586	84974681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988534
ENSMUSG00000042350.14_84977204_84997867_1	chr12	-	1275	9	ISM	ENSMUSG00000042350.14	ENST00000681099.1	4901	19	60	12265	60	-12265	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCCTCCAGTGGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	84997867	84977203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988534_84988732_84990105_84990167_84997826
ENSMUSG00000042354.8_30735212_30735712_1	chr14	-	310	3	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	5397	822	5397	-822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAGAAGGACATAGTCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	30735712	30735211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30735282_30735385_30735523_30735609
ENSMUSG00000042354.8_30735259_30735752_1	chr14	-	303	3	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	5357	869	5357	-869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGAATCCTTTTTCGGTC	NA	NA	NA	NA	NA	NA	NA	NA	30735752	30735258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30735282_30735385_30735523_30735609
ENSMUSG00000042354.8_30735412_30736052_1	chr14	-	297	3	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	5057	1022	5057	-1022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATAATGCACACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	30736052	30735411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30735523_30735609_30735753_30736009
ENSMUSG00000042354.8_30735412_30736093_1	chr14	-	338	3	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	5016	1022	5016	-1022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATAATGCACACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	30736093	30735411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30735523_30735609_30735753_30736009
ENSMUSG00000042354.8_30736591_30738332_1	chr14	-	329	4	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	2777	2201	2777	-2201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAATGGATTTGCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	30738332	30736590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30736635_30736862_30736984_30737231_30737342_30738278
ENSMUSG00000042354.8_30738338_30739274_1	chr14	-	308	4	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	1835	3948	1835	-3948	internal_fragment	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAAGCTGTTATCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	30739274	30738337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_30738412_30738783_30738865_30739013_30739125_30739232
ENSMUSG00000042359.19_76354397_76409592_1	chr2	+	1353	12	ISM	ENSMUSG00000042359.19	ENST00000409631.5	2995	22	84	16958	84	-16958	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTCAGAATTCTTCGAT	NA	NA	NA	NA	NA	NA	NA	NA	76354396	76409592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76409516
ENSMUSG00000042359.19_76354469_76409633_1	chr2	+	1322	12	ISM	ENSMUSG00000042359.19	ENST00000409631.5	2995	22	156	16917	156	-16917	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGCTCATCAGAGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	76354468	76409633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76409516
ENSMUSG00000042359.19_76376382_76415420_1	chr2	+	1319	12	ISM	ENSMUSG00000042359.19	ENST00000409631.5	2995	22	22069	11130	22069	-11130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCCCGGACACCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	76376381	76415420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76409516_76409655_76414804_76414893_76415359
ENSMUSG00000042359.19_76380021_76416503_1	chr2	+	1311	10	ISM	ENSMUSG00000042359.19	ENST00000409631.5	2995	22	25708	10047	25708	-10047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCGAGCAGGAAGCAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	76380020	76416503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76409516_76409655_76414804_76414893_76415359_76415614_76416457
ENSMUSG00000042359.19_76380154_76417094_1	chr2	+	1306	11	ISM	ENSMUSG00000042359.19	ENST00000409631.5	2995	22	25841	9456	25841	-9456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCCAAGAATTTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	76380153	76417094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058
ENSMUSG00000042359.19_76382509_76418959_1	chr2	+	1329	11	ISM	ENSMUSG00000042359.19	ENST00000409631.5	2995	22	28196	7591	28196	-7591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCACGCTTCCAAAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	76382508	76418959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895
ENSMUSG00000042359.19_76385389_76420742_1	chr2	+	1312	11	ISM	ENSMUSG00000042359.19	ENST00000409631.5	2995	22	31076	5808	31076	-5808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGACCCTTAGAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	76385388	76420742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657
ENSMUSG00000042359.19_76386268_76422167_1	chr2	+	1305	11	ISM	ENSMUSG00000042359.19	ENST00000409631.5	2995	22	31955	4383	31955	-4383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGATAGACCAGGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	76386267	76422167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76386327_76395127_76395294_76398452_76398587_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127
ENSMUSG00000042359.19_76395203_76423762_1	chr2	+	1355	11	ISM	ENSMUSG00000042359.19	ENST00000409631.5	2995	22	40890	2788	40890	-2788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGACCTCCTTCCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	76395202	76423762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76395294_76398452_76398587_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683
ENSMUSG00000042359.19_76395264_76423805_1	chr2	+	1337	11	ISM	ENSMUSG00000042359.19	ENST00000409631.5	2995	22	40951	2745	40951	-2745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGTCAGGGCACCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	76395263	76423805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76395294_76398452_76398587_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683
ENSMUSG00000042359.19_76398464_76425165_1	chr2	+	1359	11	ISM	ENSMUSG00000042359.19	ENST00000409631.5	2995	22	44151	1385	44151	-1385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAAAGATCGCGAAGACG	NA	NA	NA	NA	NA	NA	NA	NA	76398463	76425165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76398587_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107
ENSMUSG00000042359.19_76409581_76426389_1	chr2	+	1409	11	ISM	ENSMUSG00000042359.19	ENST00000409631.5	2995	22	55268	161	55268	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTATAGCTACGCGT	NA	NA	NA	NA	NA	NA	NA	NA	76409580	76426389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ENSMUSG00000042363.15_20775124_20780127_1	chr11	-	1482	2	ISM	ENSMUSG00000042363.15	ENST00000409537.2	3100	3	221	1546	221	-1546	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCAGAACCACCAGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	20780127	20775123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_20776516_20780037
ENSMUSG00000042364.12_113731288_113753861_1	chr13	-	793	2	FSM	ENSMUSG00000042364.12	ENST00000326277.5	1869	2	1092	-16	1092	16	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCGAGATTCATCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	113753861	113731287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_113731399_113753179
ENSMUSG00000042367.13_127219717_127224463_1	chr4	-	1017	2	FSM	ENSMUSG00000042367.13	ENSMUST00000046532.4	1880	2	174	689	174	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTGCTAGAGAAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	127224463	127219716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_127220565_127224294
ENSMUSG00000042367.13_127219822_127224463_1	chr4	-	912	2	FSM	ENSMUSG00000042367.13	ENSMUST00000046532.4	1880	2	174	794	174	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGTCGCTGTCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	127224463	127219821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_127220565_127224294
ENSMUSG00000042367.13_127219920_127224637_1	chr4	-	988	2	FSM	ENSMUSG00000042367.13	ENSMUST00000046532.4	1880	2	0	892	0	-202	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATCTGCTACCTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	127224637	127219919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_127220565_127224294
ENSMUSG00000042369.9_76200328_76208777_1	chr2	+	1057	6	ISM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	0	5335	0	-5335	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCATGGGTTCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	76200327	76208777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724
ENSMUSG00000042369.9_76200328_76208828_1	chr2	+	1108	6	ISM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	0	5284	0	-5284	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATGACGGGAGTAATAT	NA	NA	NA	NA	NA	NA	NA	NA	76200327	76208828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724
ENSMUSG00000042369.9_76200495_76208854_1	chr2	+	967	6	ISM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	167	5258	167	-5258	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACCATTCCAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	76200494	76208854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724
ENSMUSG00000042369.9_76200624_76209425_1	chr2	+	1087	8	ISM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	296	4687	296	-4687	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGTTCTCAAAGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	76200623	76209425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261
ENSMUSG00000042369.9_76200738_76210741_1	chr2	+	1006	9	ISM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	410	3371	410	-3371	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGGGAAAAAATGTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	76200737	76210741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708
ENSMUSG00000042369.9_76203902_76213819_1	chr2	+	1039	8	ISM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	3574	293	3574	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCTCAGCTGACTGACT	NA	NA	NA	NA	NA	NA	NA	NA	76203901	76213819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76213798
ENSMUSG00000042369.9_76203976_76213852_1	chr2	+	998	8	ISM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	3648	260	3648	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGAACCCCTGTGGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	76203975	76213852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76213798
ENSMUSG00000042369.9_76206662_76214112_1	chr2	+	1081	6	ISM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	6334	0	6334	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGACTTATTTATATGAA	NA	NA	NA	NA	NA	NA	NA	NA	76206661	76214112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76213798
ENSMUSG00000042371.13_61567035_61598716_1	chr11	-	302	3	ISM	ENSMUSG00000042371.13	ENST00000417251.6	1649	14	12020	3212	12020	-3212	internal_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAGCACGCTTTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	61598716	61567034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61567104_61595076_61595213_61598619
ENSMUSG00000042389.14_115521667_115536905_1	chr6	+	703	5	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	42	18684	42	5672	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCCAGGAAACCCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	115521666	115536905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951_115530989_115536553
ENSMUSG00000042389.14_115524917_115538362_1	chr6	+	724	5	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	3292	17227	3292	7129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGCAGAAGAAATCCATAC	NA	NA	NA	NA	NA	NA	NA	NA	115524916	115538362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_115524992_115526873_115526956_115530951_115530989_115536553_115537062_115538340
ENSMUSG00000042389.14_115526894_115542854_1	chr6	+	702	5	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	5269	12735	5269	11621	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCTGGGATGCCTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	115526893	115542854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_115526956_115530951_115530989_115536553_115537062_115538340_115538419_115542837
ENSMUSG00000042389.14_115536554_115545795_1	chr6	+	776	4	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	14929	9794	-1811	-9794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAACTCTTGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	115536553	115545795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_115537062_115538340_115538419_115542837_115542889_115545656
ENSMUSG00000042389.14_115536757_115553896_1	chr6	+	762	7	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	15132	1693	-1608	-1693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGAAGACATGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	115536756	115553896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856
ENSMUSG00000042389.14_115536898_115554952_1	chr6	+	732	8	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	15273	637	-1467	-637	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	870	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAATCCCAGAGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	115536897	115554952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
ENSMUSG00000042389.14_115536950_115554992_1	chr6	+	720	8	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	15325	597	-1415	-597	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCATCGGCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	115536949	115554992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
ENSMUSG00000042389.14_115537000_115555056_1	chr6	+	734	8	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	15375	533	-1365	-533	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	868	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTGCTGTAATGGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	115536999	115555056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
ENSMUSG00000042389.14_115542839_115562610_3	chr6	+	590	6	NIC	ENSMUSG00000042389.14	novel	591	6	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1663	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCTCCCACCTCAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	115542838	115562610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115562448
ENSMUSG00000042389.14_115545697_115555281_1	chr6	+	728	5	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	24072	308	2858	-308	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGAGAAGTGAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	115545696	115555281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
ENSMUSG00000042389.14_115545758_115555326_1	chr6	+	712	5	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	24133	263	2919	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAGCAAAACATGACATCA	NA	NA	NA	NA	NA	NA	NA	NA	115545757	115555326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
ENSMUSG00000042389.14_115553880_115555589_1	chr6	+	765	2	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	32255	0	11041	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTCCGACCGGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	115553879	115555589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_115553947_115554891
ENSMUSG00000042389.14_115553934_115555589_1	chr6	+	711	2	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	32309	0	11095	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTCCGACCGGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	115553933	115555589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_115553947_115554891
ENSMUSG00000042396.11_48400252_48402241_1	chr9	-	1131	2	ISM	ENSMUSG00000042396.11	ENSMUST00000170000.4	1773	5	4356	251	4353	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTACACAAAATGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	48402241	48400251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_48401289_48402147
ENSMUSG00000042396.11_48400564_48406486_1	chr9	-	1099	5	FSM	ENSMUSG00000042396.11	ENSMUST00000170000.4	1773	5	111	563	108	-563	multi-exon	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATAATAGGAAACATCT	NA	NA	NA	NA	NA	NA	NA	NA	48406486	48400563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48406454
ENSMUSG00000042396.11_48400564_48406599_1	chr9	-	1212	5	FSM	ENSMUSG00000042396.11	ENSMUST00000170000.4	1773	5	-2	563	-2	-563	multi-exon	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATAATAGGAAACATCT	NA	NA	NA	NA	NA	NA	NA	NA	48406599	48400563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48406454
ENSMUSG00000042406.9_80139724_80141368_1	chr15	+	697	2	FSM	ENSMUSG00000042406.9	ENST00000680446.1	950	2	-27	280	-27	-280	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCCTCGGCCCAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	80139723	80141368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_80139887_80140834
ENSMUSG00000042406.9_80139724_80141558_1	chr15	+	1723	2	FSM	ENSMUSG00000042406.9	ENST00000337304.2	1877	2	-27	181	-27	-90	multi-exon	FALSE	canonical	NA	NA	NA	NA	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCTGAAAGAGAAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	80139723	80141558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_80140723_80140834
ENSMUSG00000042406.9_80139724_80141742_1	chr15	+	1386	3	FSM	ENSMUSG00000042406.9	ENSMUST00000109605.5	1725	3	339	0	-27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGGTTTTCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80139723	80141742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_80139887_80140407_80140723_80140834
ENSMUSG00000042406.9_80139724_80141742_2	chr15	+	1299	4	FSM	ENSMUSG00000042406.9	ENST00000675582.2	1178	4	-27	-94	-27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGGTTTTCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80139723	80141742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_80139887_80140407_80140530_80140616_80140723_80140834
ENSMUSG00000042406.9_80139836_80141080_1	chr15	+	591	3	FSM	ENSMUSG00000042406.9	ENST00000674835.2	1244	3	85	568	85	-568	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTGCAGCCTTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	80139835	80141080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_80139887_80140428_80140723_80140834
ENSMUSG00000042406.9_80139839_80140960_1	chr15	+	411	3	FSM	ENSMUSG00000042406.9	ENST00000674568.2	1187	3	88	688	88	-688	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTGATCTTTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	80139838	80140960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_80139887_80140485_80140723_80140834
ENSMUSG00000042406.9_80139839_80141742_1	chr15	+	1271	3	FSM	ENSMUSG00000042406.9	ENSMUST00000109605.5	1725	3	454	0	88	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGGTTTTCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80139838	80141742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_80139887_80140407_80140723_80140834
ENSMUSG00000042406.9_80139839_80141742_2	chr15	+	1792	2	FSM	ENSMUSG00000042406.9	ENST00000337304.2	1877	2	88	-3	88	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGGTTTTCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80139838	80141742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_80140723_80140834
ENSMUSG00000042406.9_80139852_80141426_1	chr15	+	627	2	FSM	ENSMUSG00000042406.9	ENST00000680446.1	950	2	101	222	101	-222	multi-exon	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAGAAATTGGATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	80139851	80141426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_80139887_80140834
ENSMUSG00000042410.17_75662533_75756555_3	chr2	+	801	5	FSM	ENSMUSG00000042410.17	ENST00000409888.1	721	5	-80	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCTCCTGGGCCTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	75662532	75756555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_75662856_75681837_75681928_75740004_75740045_75741964_75742023_75756265
ENSMUSG00000042410.17_75662666_75687432_1	chr2	+	639	6	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	133	38120	47	-38120	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGTATTGTGTTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	75662665	75687432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360
ENSMUSG00000042410.17_75662666_75756555_1	chr2	+	663	5	NNC	ENSMUSG00000042410.17	novel	721	5	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCTCCTGGGCCTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	75662665	75756555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_75662856_75681842_75681928_75740004_75740045_75741964_75742023_75756265
ENSMUSG00000042410.17_75684514_75698757_1	chr2	+	664	7	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	21981	26795	21665	-26795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTGTATTTGTAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	75684513	75698757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648
ENSMUSG00000042410.17_75684874_75707942_1	chr2	+	672	7	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	22341	17610	22025	-17610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAAACAAAGTAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	75684873	75707942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814
ENSMUSG00000042410.17_75689242_75722212_1	chr2	+	654	7	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	26709	3340	26393	-3340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAGACTAAAAAAATCTAA	NA	NA	NA	NA	NA	NA	NA	NA	75689241	75722212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135
ENSMUSG00000042410.17_75697088_75730595_1	chr2	+	678	7	ISM	ENSMUSG00000042410.17	ENST00000681449.1	1825	20	34240	25816	34239	5043	internal_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTGTATCTCTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	75697087	75730595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525
ENSMUSG00000042410.17_75698727_75733323_1	chr2	+	533	7	ISM	ENSMUSG00000042410.17	ENST00000681449.1	1825	20	35879	23088	35878	7771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAACCTAATAAAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	75698726	75733323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261
ENSMUSG00000042410.17_75722182_75767422_1	chr2	+	593	8	ISM	ENSMUSG00000042410.17	ENST00000642466.2	2053	20	59563	152	59333	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACCATTGGGTAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	75722181	75767422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75767353
ENSMUSG00000042414.8_13176154_13194746_1	chr1	-	1011	6	ISM	ENSMUSG00000042414.8	ENST00000276594.3	1523	8	1103	0	1103	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCGAATCCAGCAAGATCA	NA	NA	NA	NA	NA	NA	NA	NA	13194746	13176153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_13176201_13184483_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586
ENSMUSG00000042414.8_13184583_13195430_1	chr1	-	958	7	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	1957	902	419	-902	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGGACAATGGCCGTAG	NA	NA	NA	NA	NA	NA	NA	NA	13195430	13184582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389
ENSMUSG00000042414.8_13184635_13195483_1	chr1	-	959	7	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	1904	954	366	-954	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAAAGCCTTTGCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	13195483	13184634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389
ENSMUSG00000042414.8_13184678_13195544_1	chr1	-	977	7	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	1843	997	305	-997	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGACAGCACTCAGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	13195544	13184677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389
ENSMUSG00000042414.8_13188987_13195720_1	chr1	-	1017	5	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	1667	5306	129	-5306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCAGTTGCTGGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	13195720	13188986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389
ENSMUSG00000042414.8_13192575_13195823_1	chr1	-	927	4	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	1564	8894	26	-8894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAGAGAATCTACTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	13195823	13192574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_13192856_13194586_13194745_13194842_13194897_13195389
ENSMUSG00000042426.7_113066167_113076963_1	chr13	+	644	6	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	8	15091	8	-15091	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCTTCAAACTAGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	113066166	113076963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906
ENSMUSG00000042426.7_113067376_113078263_1	chr13	+	703	6	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	1217	13791	1217	-13791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAATGAGAAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	113067375	113078263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206
ENSMUSG00000042426.7_113069056_113078370_1	chr13	+	681	5	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	2897	13684	2897	-13684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGGGGAGCAGGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	113069055	113078370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206
ENSMUSG00000042426.7_113069617_113081072_1	chr13	+	604	5	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	3458	10982	3458	-10982	internal_fragment	TRUE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGAAGCTGGACTGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	113069616	113081072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113069764_113072002_113072132_113076906_113077034_113078206_113078371_113081035
ENSMUSG00000042426.7_113072073_113083374_1	chr13	+	710	6	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	5914	8680	5914	-8680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCAATAAAATGGAAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	113072072	113083374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113072132_113076906_113077034_113078206_113078371_113081035_113081194_113081603_113081728_113083296
ENSMUSG00000042426.7_113076934_113083395_1	chr13	+	645	5	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	10775	8659	10775	-8659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACGGGATCTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	113076933	113083395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113077034_113078206_113078371_113081035_113081194_113081603_113081728_113083296
ENSMUSG00000042426.7_113078296_113083565_1	chr13	+	626	4	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	12137	8489	12137	-8489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCAGAAGACCTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	113078295	113083565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113078371_113081035_113081194_113081603_113081728_113083296
ENSMUSG00000042426.7_113081073_113083676_1	chr13	+	625	3	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	14914	8378	14914	-8378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTCAATTGTGGAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	113081072	113083676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113081194_113081603_113081728_113083296
ENSMUSG00000042426.7_113081119_113083732_1	chr13	+	635	3	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	14960	8322	14960	-8322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGAGTGGCAAGAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	113081118	113083732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113081194_113081603_113081728_113083296
ENSMUSG00000042426.7_113081650_113083841_1	chr13	+	623	2	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	15491	8213	15491	-8213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGCGGTGAGCTTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	113081649	113083841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113081728_113083296
ENSMUSG00000042426.7_113081698_113083902_1	chr13	+	636	2	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	15539	8152	15539	-8152	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGGTAAGGCTTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	113081697	113083902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113081728_113083296
ENSMUSG00000042426.7_113083328_113084802_1	chr13	+	638	2	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	17169	7252	17169	-7252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTATTGTACAACCGG	NA	NA	NA	NA	NA	NA	NA	NA	113083327	113084802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113083909_113084745
ENSMUSG00000042426.7_113083439_113089362_1	chr13	+	640	3	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	17280	2692	17280	-2692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCTCGTTATCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	113083438	113089362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113083909_113084745_113084890_113089336
ENSMUSG00000042426.7_113083478_113089435_1	chr13	+	674	3	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	17319	2619	17319	-2619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGACAGTGACAAGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	113083477	113089435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113083909_113084745_113084890_113089336
ENSMUSG00000042426.7_113083619_113090237_1	chr13	+	641	4	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	17460	1817	17460	-1817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCTTCGTCCTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	113083618	113090237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113083909_113084745_113084890_113089336_113089514_113090207
ENSMUSG00000042426.7_113083763_113091725_1	chr13	+	652	5	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	17604	329	17604	-329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCTACCAAAAGTACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	113083762	113091725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681
ENSMUSG00000042426.7_113083833_113091781_1	chr13	+	638	5	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	17674	273	17674	-273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATCAACCTGGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	113083832	113091781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681
ENSMUSG00000042426.7_113084745_113092051_1	chr13	+	726	5	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	18586	3	18586	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACTACAAATCTTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	113084744	113092051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933
ENSMUSG00000042446.17_126756975_126759326_1	chr4	-	1173	2	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	102602	1243	102602	-1243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATAATCTGTCTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	126759326	126756974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126758111_126759289
ENSMUSG00000042446.17_126757181_126762648_1	chr4	-	1199	3	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	99280	1449	99280	-1449	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTGAAGTATTTATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	126762648	126757180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126758111_126759289_126759420_126762509
ENSMUSG00000042446.17_126757258_126762731_1	chr4	-	1205	3	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	99197	1526	99197	-1526	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAGGTAAAAAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	126762731	126757257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126758111_126759289_126759420_126762509
ENSMUSG00000042446.17_126757469_126771470_1	chr4	-	1182	5	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	90458	1737	90458	-1737	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGAGACTCAGCCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	126771470	126757468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421
ENSMUSG00000042446.17_126757747_126776309_1	chr4	-	1180	7	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	85619	2015	85619	-2015	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGAGAAGGGTGAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	126776309	126757746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232
ENSMUSG00000042446.17_126757903_126783371_1	chr4	-	1183	8	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	78557	2171	78557	-2171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAGGAAAGCTCCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	126783371	126757902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307
ENSMUSG00000042446.17_126758006_126783858_1	chr4	-	1181	9	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	78070	2274	78070	-2274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGGACACCATGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	126783858	126758005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788
ENSMUSG00000042446.17_126758066_126783926_1	chr4	-	1189	9	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	78002	2334	78002	-2334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCGCTCCTGTGTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	126783926	126758065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788
ENSMUSG00000042446.17_126759378_126787109_1	chr4	-	1174	10	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	74819	3646	74819	-3646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCCAGTGGGAGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	126787109	126759377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087
ENSMUSG00000042446.17_126762670_126789134_1	chr4	-	1184	10	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	72794	6938	72794	-6938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTTCAATACCAAATA	NA	NA	NA	NA	NA	NA	NA	NA	126789134	126762669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072
ENSMUSG00000042446.17_126762725_126789188_1	chr4	-	1183	10	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	72740	6993	72740	-6993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGAGTGCAAACAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	126789188	126762724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072
ENSMUSG00000042446.17_126764010_126792177_1	chr4	-	1204	10	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	69751	8278	69751	-8278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATATGGGAACCTAC	NA	NA	NA	NA	NA	NA	NA	NA	126792177	126764009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088
ENSMUSG00000042446.17_126771523_126794439_1	chr4	-	1161	11	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	67489	15791	67489	-15791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGGGCTTATGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	126794439	126771522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397
ENSMUSG00000042446.17_126776232_126796378_1	chr4	-	1160	10	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	65550	20500	65550	-20500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAGACATTGTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	126796378	126776231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335
ENSMUSG00000042446.17_126783307_126798362_1	chr4	-	1269	10	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	63566	27575	63566	-27575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCGGAAGCTTAAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	126798362	126783306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189
ENSMUSG00000042446.17_126783840_126799127_1	chr4	-	1178	10	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	62801	28108	62801	-28108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTTCAAAAGGGGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	126799127	126783839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071
ENSMUSG00000042446.17_126783892_126799176_1	chr4	-	1175	10	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	62752	28160	62752	-28160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTACGCATTAAAGTCGAA	NA	NA	NA	NA	NA	NA	NA	NA	126799176	126783891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071
ENSMUSG00000042446.17_126783954_126799222_1	chr4	-	1159	10	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	62706	28222	62706	-28222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGGTGATCTTGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	126799222	126783953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071
ENSMUSG00000042446.17_126787108_126799775_1	chr4	-	1181	9	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	62153	31376	62153	-31376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTTTATCCCAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	126799775	126787107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664
ENSMUSG00000042446.17_126787164_126799829_1	chr4	-	1179	9	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	62099	31432	62099	-31432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAGCAGATCTCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	126799829	126787163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664
ENSMUSG00000042446.17_126789138_126800358_1	chr4	-	1174	9	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	61570	33406	61570	-33406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCCCATACCTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	126800358	126789137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313
ENSMUSG00000042446.17_126792155_126800938_1	chr4	-	1188	9	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	60990	36423	60990	-36423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCATTACACAGACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	126800938	126792154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878
ENSMUSG00000042446.17_126794396_126804623_1	chr4	-	1205	8	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	57305	38664	57305	-38664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGATTTGGACCGCC	NA	NA	NA	NA	NA	NA	NA	NA	126804623	126794395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582
ENSMUSG00000042446.17_126794466_126804664_1	chr4	-	1176	8	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	57264	38734	57264	-38734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGGTATCTTTAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	126804664	126794465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582
ENSMUSG00000042446.17_126794512_126804724_1	chr4	-	1190	8	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	57204	38780	57204	-38780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGGGCCTCCGTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	126804724	126794511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582
ENSMUSG00000042446.17_126796425_126804946_1	chr4	-	1186	8	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	56982	40693	56982	-40693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATAAAACACTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	126804946	126796424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902
ENSMUSG00000042446.17_126798190_126805077_1	chr4	-	1255	7	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	56851	42458	56851	-42458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAAAAAAATCATTCATA	NA	NA	NA	NA	NA	NA	NA	NA	126805077	126798189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902
ENSMUSG00000042446.17_126799075_126809023_1	chr4	-	1238	7	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	52905	43343	52905	-43343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGTAATTGACAAATAGTA	NA	NA	NA	NA	NA	NA	NA	NA	126809023	126799074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864
ENSMUSG00000042446.17_126799664_126809458_1	chr4	-	1273	7	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	52470	43932	52470	-43932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTGGGCTCCTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	126809458	126799663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373
ENSMUSG00000042446.17_126799769_126816941_1	chr4	-	1253	8	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	44987	44037	44987	-44037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCAGTCCCAGCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	126816941	126799768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856
ENSMUSG00000042446.17_126799830_126816941_1	chr4	-	1192	8	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	44987	44098	44987	-44098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGCTGTGTCCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	126816941	126799829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856
ENSMUSG00000042446.17_126800356_126817410_1	chr4	-	1174	8	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	44518	44624	44518	-44624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACGCAACTTCTGCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	126817410	126800355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361
ENSMUSG00000042446.17_126800877_126819354_1	chr4	-	1175	8	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	42574	45145	42574	-45145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTGCTTTCATAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	126819354	126800876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294
ENSMUSG00000042446.17_126804632_126819575_1	chr4	-	1194	7	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	42353	48900	42353	-48900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTCTAAGAAGTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	126819575	126804631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294
ENSMUSG00000042446.17_126804761_126819684_1	chr4	-	1174	7	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	42244	49029	42244	-49029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTCTGCAGTGATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	126819684	126804760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294
ENSMUSG00000042446.17_126808865_126861692_1	chr4	-	1226	7	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	236	53133	236	-53133	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCAGAGTTCTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	126861692	126808864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ENSMUSG00000042446.17_126809392_126861932_1	chr4	-	1192	6	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-4	53660	-4	-53660	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGGCAGTCCTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	126861932	126809391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ENSMUSG00000042451.13_134121186_134125607_1	chr1	+	1007	6	ISM	ENSMUSG00000042451.13	ENSMUST00000038445.13	1828	11	0	3362	0	-3362	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCTGGCTGGGGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	134121185	134125607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134121465_134121551_134121687_134122314_134122483_134124707_134124797_134125088_134125285_134125467
ENSMUSG00000042451.13_134121351_134126225_1	chr1	+	929	7	ISM	ENSMUSG00000042451.13	ENSMUST00000191577.2	2320	10	156	2745	156	-2744	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAGAAAACCTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	134121350	134126225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134121465_134121551_134121687_134122314_134122483_134124707_134124797_134125088_134125285_134125467_134125608_134126138
ENSMUSG00000042451.13_134121445_134127494_1	chr1	+	951	8	ISM	ENSMUSG00000042451.13	ENSMUST00000191577.2	2320	10	250	1476	250	-1475	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCGCCCTCGTTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	134121444	134127494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134121465_134121551_134121687_134122314_134122483_134124707_134124797_134125088_134125285_134125467_134125608_134126138_134126299_134127451
ENSMUSG00000042451.13_134121620_134127730_1	chr1	+	1000	8	ISM	ENSMUSG00000042451.13	ENSMUST00000191577.2	2320	10	425	1240	425	-1239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAAGTACCGTGCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	134121619	134127730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134121687_134122314_134122483_134124707_134124797_134125088_134125285_134125467_134125608_134126138_134126299_134127451_134127589_134127687
ENSMUSG00000042451.13_134122392_134127874_2	chr1	+	1000	7	ISM	ENSMUSG00000042451.13	ENSMUST00000191577.2	2320	10	1197	1096	1197	-1095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGAGTCGGAAGGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	134122391	134127874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134122483_134124707_134124797_134125088_134125285_134125467_134125608_134126138_134126299_134127451_134127589_134127687
ENSMUSG00000042451.13_134124756_134128712_1	chr1	+	941	8	ISM	ENSMUSG00000042451.13	ENSMUST00000038445.13	1828	11	3570	257	3561	-257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTATCCACCAAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	134124755	134128712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134124797_134125088_134125285_134125467_134125608_134126138_134126299_134127451_134127589_134127687_134127875_134128132_134128186_134128685
ENSMUSG00000042451.13_134125169_134128833_1	chr1	+	941	7	ISM	ENSMUSG00000042451.13	ENSMUST00000038445.13	1828	11	3983	136	3974	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACCCAGGATCAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	134125168	134128833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134125285_134125467_134125608_134126138_134126299_134127451_134127589_134127687_134127875_134128132_134128186_134128685
ENSMUSG00000042451.13_134125224_134128970_1	chr1	+	1023	7	ISM	ENSMUSG00000042451.13	ENSMUST00000038445.13	1828	11	4038	-1	4029	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCATGGGGTTTCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	134125223	134128970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_134125285_134125467_134125608_134126138_134126299_134127451_134127589_134127687_134127875_134128132_134128186_134128685
ENSMUSG00000042472.12_84363626_84390498_1	chr12	+	2593	12	NNC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84363625	84390498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385420_84385557_84386875_84387004_84389768
ENSMUSG00000042472.12_84363626_84390498_2	chr12	+	2593	12	NNC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84363625	84390498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384394_84384516_84385415_84385557_84386875_84387004_84389768
ENSMUSG00000042472.12_84363892_84389824_1	chr12	+	1439	11	FSM	ENSMUSG00000042472.12	ENST00000540593.5	1520	11	81	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTGTCTGATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	84363891	84389824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ENSMUSG00000042472.12_84374050_84387003_1	chr12	+	872	6	ISM	ENSMUSG00000042472.12	ENST00000324593.10	2245	11	10212	3495	-2525	-2	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAAGCTGTTTCCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	84374049	84387003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84386875
ENSMUSG00000042472.12_84374214_84389824_1	chr12	+	764	7	ISM	ENSMUSG00000042472.12	ENST00000324593.10	2245	11	10376	674	-2361	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTGTCTGATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	84374213	84389824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84386875_84387004_84389768
ENSMUSG00000042472.12_84376575_84387003_1	chr12	+	790	6	FSM	ENSMUSG00000042472.12	ENST00000639051.1	792	6	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAAGCTGTTTCCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	84376574	84387003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_84376727_84378437_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875
ENSMUSG00000042472.12_84378408_84390038_1	chr12	+	797	5	ISM	ENSMUSG00000042472.12	ENST00000324593.10	2245	11	14570	460	1833	214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGCCAAGAGCAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	84378407	84390038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84378591_84379708_84379799_84384389_84384516_84386875_84387004_84389768
ENSMUSG00000042472.12_84378550_84390190_1	chr12	+	807	5	ISM	ENSMUSG00000042472.12	ENST00000324593.10	2245	11	14712	308	1975	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTGTTGCTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	84378549	84390190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84378591_84379708_84379799_84384389_84384516_84386875_84387004_84389768
ENSMUSG00000042472.12_84379778_84390291_1	chr12	+	798	4	ISM	ENSMUSG00000042472.12	ENST00000324593.10	2245	11	15940	207	3203	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAATTACTTGAATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	84379777	84390291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84379799_84384389_84384516_84386875_84387004_84389768
ENSMUSG00000042472.12_84384420_84390345_1	chr12	+	801	3	ISM	ENSMUSG00000042472.12	ENST00000324593.10	2245	11	20582	153	7845	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTGACTTGGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	84384419	84390345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84384516_84386875_84387004_84389768
ENSMUSG00000042485.8_30601298_30603249_1	chr14	+	777	3	FSM	ENSMUSG00000042485.8	ENSMUST00000040715.8	1236	3	141	318	141	-318	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGTGTGTGCTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	30601297	30603249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_30601573_30602573_30602707_30602880
ENSMUSG00000042485.8_30602568_30603567_1	chr14	+	826	2	ISM	ENSMUSG00000042485.8	ENSMUST00000040715.8	1236	3	1411	0	1411	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCGGTTTCCCATCATGC	NA	NA	NA	NA	NA	NA	NA	NA	30602567	30603567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30602707_30602880
ENSMUSG00000042487.7_75348818_75352911_1	chr9	+	495	2	ISM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	0	20803	0	-20803	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCAGTCAGATGACGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	75348817	75352911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75348918_75352516
ENSMUSG00000042487.7_75352818_75354414_1	chr9	+	489	2	ISM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	4000	19300	4000	-19300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTACGACTGAAGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	75352817	75354414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75353276_75354383
ENSMUSG00000042487.7_75353018_75356657_1	chr9	+	477	4	ISM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	4200	17057	4200	-17057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATCAGCAGGAGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	75353017	75356657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75353276_75354383_75354489_75355583_75355679_75356638
ENSMUSG00000042487.7_75353090_75356712_1	chr9	+	460	4	ISM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	4272	17002	4272	-17002	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTAAACACGGACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	75353089	75356712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75353276_75354383_75354489_75355583_75355679_75356638
ENSMUSG00000042487.7_75353213_75357842_1	chr9	+	482	5	ISM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	4395	15872	4395	-15872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATTGAAGGTACCATG	NA	NA	NA	NA	NA	NA	NA	NA	75353212	75357842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769
ENSMUSG00000042487.7_75355617_75363009_1	chr9	+	475	5	ISM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	6799	10705	6799	-10705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGGCTGCAGGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	75355616	75363009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922
ENSMUSG00000042487.7_75356691_75364399_1	chr9	+	469	5	ISM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	7873	9315	7873	-9315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAAGACACAGAAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	75356690	75364399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75356785_75357769_75357855_75361905_75362001_75362922_75363058_75364339
ENSMUSG00000042487.7_75357816_75365408_1	chr9	+	457	5	ISM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	8998	8306	8998	-8306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGCGAGAGAAACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	75357815	75365408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75357855_75361905_75362001_75362922_75363058_75364339_75364476_75365356
ENSMUSG00000042487.7_75364387_75373560_1	chr9	+	459	4	ISM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	15569	154	15569	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGAAGAAGATGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	75364386	75373560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_75364476_75365356_75365544_75368287_75368386_75373475
ENSMUSG00000042489.16_126453047_126466989_1	chr4	+	1591	8	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	2154	18562	2154	-18560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCGGCAGAAGCGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	126453046	126466989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466928
ENSMUSG00000042489.16_126453653_126467140_1	chr4	+	1738	7	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	2760	18411	2760	-18409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGGGAAATTATATAATT	NA	NA	NA	NA	NA	NA	NA	NA	126453652	126467140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466928
ENSMUSG00000042489.16_126453842_126468480_1	chr4	+	1596	8	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	2949	17071	2949	-17069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAACAGATAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	126453841	126468480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466928_126467141_126468433
ENSMUSG00000042489.16_126453903_126468528_1	chr4	+	1583	8	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	3010	17023	3010	-17021	internal_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTGCCCTCTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	126453902	126468528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466928_126467141_126468433
ENSMUSG00000042489.16_126453946_126468588_1	chr4	+	1600	8	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	3053	16963	3053	-16961	internal_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGCTCTTCTAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	126453945	126468588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466928_126467141_126468433
ENSMUSG00000042489.16_126457698_126470289_1	chr4	+	1678	9	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	6805	15262	6805	-15260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTAGTTTTGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	126457697	126470289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134
ENSMUSG00000042489.16_126459484_126471432_1	chr4	+	1551	8	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	8591	14119	8591	-14117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGATATCAGGCTGTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	126459483	126471432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126459592_126459763_126460375_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405
ENSMUSG00000042489.16_126459517_126471541_1	chr4	+	1627	8	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	8624	14010	8624	-14008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTGAGGAGAAATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	126459516	126471541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126459592_126459763_126460375_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405
ENSMUSG00000042489.16_126460124_126479654_1	chr4	+	1596	11	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	9231	5897	9231	-5895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCAGAGGTGTCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	126460123	126479654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126460375_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630
ENSMUSG00000042489.16_126460153_126466168_1	chr4	+	319	2	ISM	ENSMUSG00000042489.16	ENST00000251195.9	3969	24	9339	19381	9260	-19381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGCACTAACGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	126460152	126466168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126460375_126466071
ENSMUSG00000042489.16_126460180_126479700_1	chr4	+	1586	11	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	9287	5851	9287	-5849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGGAGGAGATTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	126460179	126479700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126460375_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630
ENSMUSG00000042489.16_126460241_126479748_1	chr4	+	1573	11	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	9348	5803	9348	-5801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGTCTGATGAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	126460240	126479748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126460375_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630
ENSMUSG00000042489.16_126460348_126479929_1	chr4	+	1545	12	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	9455	5622	9455	-5620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGGTTATATCAAGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	126460347	126479929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126460375_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897
ENSMUSG00000042489.16_126466208_126468482_1	chr4	+	317	3	ISM	ENSMUSG00000042489.16	ENST00000251195.9	3969	24	15394	17067	15315	-17067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAACAGATAAAGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	126466207	126468482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126466264_126466928_126467141_126468433
ENSMUSG00000042489.16_126467040_126481437_1	chr4	+	1584	12	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	16147	4114	16147	-4112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGAACGGATTGAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	126467039	126481437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350
ENSMUSG00000042489.16_126468531_126485037_1	chr4	+	1591	13	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	17638	514	17638	-512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACCAGGAGGTGCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	126468530	126485037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976
ENSMUSG00000042489.16_126469638_126485549_1	chr4	+	1632	12	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	18745	2	18745	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGATTATATGTGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	126469637	126485549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387
ENSMUSG00000042489.16_126479737_126484362_1	chr4	+	339	4	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	28844	1189	28844	-1187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACATTGGGGACGACAG	NA	NA	NA	NA	NA	NA	NA	NA	126479736	126484362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126479796_126479897_126480020_126481350_126481479_126484332
ENSMUSG00000042489.16_126481395_126485455_1	chr4	+	338	4	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	30502	96	30502	-94	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCCAGCGCTCCCCGAA	NA	NA	NA	NA	NA	NA	NA	NA	126481394	126485455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_126481479_126484332_126484436_126484976_126485060_126485387
ENSMUSG00000042502.11_126791197_126793482_1	chr7	-	2121	3	ISM	ENSMUSG00000042502.11	ENSMUST00000206026.2	2906	7	1628	29	1565	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTGGTAATTTAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	126793482	126791196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126793103_126793186_126793294_126793374
ENSMUSG00000042502.11_126791742_126794258_1	chr7	-	2129	5	ISM	ENSMUSG00000042502.11	ENSMUST00000206026.2	2906	7	852	574	789	-545	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCACTCAGTTCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	126794258	126791741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194
ENSMUSG00000042502.11_126791879_126794616_1	chr7	-	2148	6	ISM	ENSMUSG00000042502.11	ENSMUST00000206026.2	2906	7	494	711	431	-682	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGAAACCCTCCAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	126794616	126791878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532
ENSMUSG00000042505.7_6956007_7038944_1	chr6	+	279	2	FSM	ENSMUSG00000042505.7	ENST00000432641.3	369	2	-14	104	3	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATGACTTTCGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	6956006	7038944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_6956205_7038863
ENSMUSG00000042506.16_61044394_61046070_1	chr11	-	1011	2	ISM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	19811	1783	19811	-1783	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGACTGCATTGCATAGT	NA	NA	NA	NA	NA	NA	NA	NA	61046070	61044393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61045340_61046005
ENSMUSG00000042506.16_61044452_61046131_1	chr11	-	1014	2	ISM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	19750	1841	19750	-1841	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGCCTGCCCAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	61046131	61044451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61045340_61046005
ENSMUSG00000042506.16_61044535_61046153_1	chr11	-	953	2	ISM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	19728	1924	19728	-1924	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGAGTCCCTGGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	61046153	61044534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61045340_61046005
ENSMUSG00000042506.16_61044639_61048065_1	chr11	-	983	4	ISM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	17816	2028	17816	-2028	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGATTCTCTCCCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	61048065	61044638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996
ENSMUSG00000042506.16_61045086_61052183_1	chr11	-	995	8	ISM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	13698	2475	13698	-2475	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACCTGTCCTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	61052183	61045085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139
ENSMUSG00000042506.16_61045145_61052235_1	chr11	-	988	8	ISM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	13646	2534	13646	-2534	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGTCAGGTGGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	61052235	61045144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139
ENSMUSG00000042506.16_61045268_61053732_1	chr11	-	997	9	ISM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	12149	2657	12149	-2657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAAAGAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	61053732	61045267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139_61052288_61053652
ENSMUSG00000042506.16_61046091_61054599_1	chr11	-	978	9	ISM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	11282	3480	11282	-3480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCGGCAGCACAAAGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	61054599	61046090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551
ENSMUSG00000042506.16_61049118_61059101_1	chr11	-	942	8	ISM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	6780	6507	6780	-6507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTTTCCCAGAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	61059101	61049117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61049245_61050030_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551_61054654_61057496_61057611_61059085
ENSMUSG00000042506.16_61049118_61059218_1	chr11	-	1059	8	ISM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	6663	6507	6663	-6507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTTTCCCAGAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	61059218	61049117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61049245_61050030_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551_61054654_61057496_61057611_61059085
ENSMUSG00000042506.16_61050059_61065628_1	chr11	-	992	8	ISM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	253	7448	253	-7448	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCACTCTCACAGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	61065628	61050058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ENSMUSG00000042506.16_61050128_61065683_1	chr11	-	978	8	ISM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	198	7517	198	-7517	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATTCTGGCCCTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	61065683	61050127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ENSMUSG00000042508.17_9168877_9176680_1	chr5	-	2168	6	ISM	ENSMUSG00000042508.17	ENSMUST00000071921.13	3806	18	35096	76	35021	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCAAGATTTTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	9176680	9168876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539
ENSMUSG00000042508.17_9169223_9179323_1	chr5	-	2009	7	ISM	ENSMUSG00000042508.17	ENSMUST00000095017.11	3498	17	32426	351	32378	-351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGGGGGTACACTATA	NA	NA	NA	NA	NA	NA	NA	NA	9179323	9169222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147
ENSMUSG00000042520.17_89907595_89928600_1	chr3	-	2436	15	ISM	ENSMUSG00000042520.17	ENST00000361546.6	3865	26	26608	-49	26608	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCAGCCTCTGCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	89928600	89907594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545
ENSMUSG00000042520.17_89907871_89930821_1	chr3	-	2467	16	ISM	ENSMUSG00000042520.17	ENST00000361546.6	3865	26	24387	227	24387	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCCAAATATATATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	89930821	89907870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737
ENSMUSG00000042520.17_89907935_89930877_1	chr3	-	2459	16	ISM	ENSMUSG00000042520.17	ENST00000361546.6	3865	26	24331	291	24331	-291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTCCTTCACTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	89930877	89907934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737
ENSMUSG00000042520.17_89907989_89930936_1	chr3	-	2464	16	ISM	ENSMUSG00000042520.17	ENST00000361546.6	3865	26	24272	345	24272	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTTCCTCCTTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	89930936	89907988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737
ENSMUSG00000042520.17_89908120_89933958_1	chr3	-	2564	18	ISM	ENSMUSG00000042520.17	ENST00000361546.6	3865	26	21250	476	21250	-476	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGGGGCGATTCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	89933958	89908119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899
ENSMUSG00000042520.17_89909586_89935666_1	chr3	-	2447	18	ISM	ENSMUSG00000042520.17	ENST00000361546.6	3865	26	19542	1942	19542	-1942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACAGCCCTTCCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	89935666	89909585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631
ENSMUSG00000042520.17_89909706_89941484_1	chr3	-	2455	19	ISM	ENSMUSG00000042520.17	ENSMUST00000198322.5	3385	27	18278	2259	13724	-2062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCCATCAATCCAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	89941484	89909705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371
ENSMUSG00000042520.17_89910602_89945729_1	chr3	-	2429	20	ISM	ENSMUSG00000042520.17	ENST00000361546.6	3865	26	9479	2958	9479	2699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACACGGGCGTGCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	89945729	89910601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676
ENSMUSG00000042520.17_89913694_89916623_1	chr3	-	544	3	ISM	ENSMUSG00000042520.17	ENSMUST00000195995.5	3516	26	43156	167	38585	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCATATGTTTGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	89916623	89913693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89913925_89915562_89915669_89916416
ENSMUSG00000042520.17_89915608_89946227_1	chr3	-	2482	20	ISM	ENSMUSG00000042520.17	ENSMUST00000090908.11	3629	25	13532	2307	8981	-2081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCAACAGCCAAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	89946227	89915607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154
ENSMUSG00000042520.17_89916549_89951066_1	chr3	-	2445	20	ISM	ENSMUSG00000042520.17	ENSMUST00000090908.11	3629	25	8693	3248	4142	-3022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCACCACACCACGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	89951066	89916548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006
ENSMUSG00000042520.17_89920020_89955185_1	chr3	-	2488	20	ISM	ENSMUSG00000042520.17	ENSMUST00000090908.11	3629	25	4574	6719	23	-6493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGCTCCAGACAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	89955185	89920019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076
ENSMUSG00000042520.17_89945707_89955144_1	chr3	-	525	5	ISM	ENSMUSG00000042520.17	ENSMUST00000195995.5	3516	26	4635	32180	64	-32180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCAGAAGAGGCCGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	89955144	89945706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076
ENSMUSG00000042523.13_84161140_84185312_1	chr12	+	487	4	FSM	ENSMUSG00000042523.13	ENST00000554339.5	469	4	-9	-9	0	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCAGTGTTTATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	84161139	84185312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_84161174_84182340_84182468_84183270_84183412_84185127
ENSMUSG00000042523.13_84182340_84185312_1	chr12	+	454	3	ISM	ENSMUSG00000042523.13	ENST00000554339.5	469	4	21191	-9	21175	9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCAGTGTTTATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	84182339	84185312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84182468_84183270_84183412_84185127
ENSMUSG00000042532.15_42251838_42257417_1	chr19	+	938	4	ISM	ENSMUSG00000042532.15	ENSMUST00000087123.6	2823	5	7660	1370	79	-1370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCCGAAAGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	42251837	42257417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_42251894_42255189_42255343_42255415_42255518_42256790
ENSMUSG00000042532.15_42255414_42257620_1	chr19	+	934	2	ISM	ENSMUSG00000042532.15	ENSMUST00000087123.6	2823	5	11236	1167	3655	-1167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACTGTGTGCGCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	42255413	42257620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_42255518_42256790
ENSMUSG00000042535.10_79600094_79604312_1	chr15	+	900	6	ISM	ENSMUSG00000042535.10	ENSMUST00000046463.10	3449	12	25048	1368	25048	-1368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTTGACCACCCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	79600093	79604312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
ENSMUSG00000042535.10_79601795_79604750_1	chr15	+	921	3	ISM	ENSMUSG00000042535.10	ENSMUST00000046463.10	3449	12	26749	930	26749	-930	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCAGTGAGATCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	79601794	79604750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_79601975_79603228_79603430_79604210
ENSMUSG00000042535.10_79603227_79604955_1	chr15	+	948	2	ISM	ENSMUSG00000042535.10	ENSMUST00000046463.10	3449	12	28181	725	28181	-725	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAAGCTCTTCAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	79603226	79604955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_79603430_79604210
ENSMUSG00000042541.11_6557815_6560503_1	chr6	-	773	2	ISM	ENSMUSG00000042541.11	ENSMUST00000041111.10	1472	3	18155	521	18155	-521	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTTGACGGTTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	6560503	6557814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_6558492_6560407
ENSMUSG00000042541.11_6557957_6578500_1	chr6	-	651	3	FSM	ENSMUSG00000042541.11	ENSMUST00000041111.10	1472	3	158	663	158	-663	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTAGAGTCTGTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	6578500	6557956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_6558492_6560407_6560502_6578478
ENSMUSG00000042541.11_6557957_6578663_1	chr6	-	814	3	FSM	ENSMUSG00000042541.11	ENSMUST00000041111.10	1472	3	-5	663	-5	-663	multi-exon	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTAGAGTCTGTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	6578663	6557956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_6558492_6560407_6560502_6578478
ENSMUSG00000042541.11_6557957_6578663_2	chr6	-	811	3	NNC	ENSMUSG00000042541.11	novel	1472	3	NA	NA	-5	-663	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTAGAGTCTGTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	6578663	6557956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_6558485_6560403_6560502_6578478
ENSMUSG00000042549.11_60811743_60822581_1	chr11	-	1179	2	FSM	ENSMUSG00000042549.11	ENSMUST00000123544.2	1291	2	112	0	112	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATGGGTATAAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	60822581	60811742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_60812732_60822391
ENSMUSG00000042557.15_57020901_57032580_1	chr9	+	589	5	ISM	ENSMUSG00000042557.15	ENSMUST00000049169.6	4845	20	27036	3070	27036	-2860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTCCTATAAGATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	57020900	57032580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452
ENSMUSG00000042557.15_57020969_57032654_1	chr9	+	595	5	ISM	ENSMUSG00000042557.15	ENSMUST00000049169.6	4845	20	27104	2996	27104	-2786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAGGTGAGAAATGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	57020968	57032654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452
ENSMUSG00000042558.17_126209845_126211560_1	chr4	-	963	3	ISM	ENSMUSG00000042558.17	ENSMUST00000102617.5	1672	6	3936	5	3936	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCATGTCCTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	126211560	126209844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126210659_126211095_126211197_126211512
ENSMUSG00000042558.17_126209967_126211612_1	chr4	-	893	3	ISM	ENSMUSG00000042558.17	ENSMUST00000102617.5	1672	6	3884	127	3884	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTGGCTCCTGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	126211612	126209966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126210659_126211095_126211197_126211512
ENSMUSG00000042558.17_126210028_126211656_1	chr4	-	876	3	ISM	ENSMUSG00000042558.17	ENSMUST00000102617.5	1672	6	3840	188	3840	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCGGTTGGGTTCTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	126211656	126210027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126210659_126211095_126211197_126211512
ENSMUSG00000042558.17_126210286_126212288_1	chr4	-	964	5	ISM	ENSMUSG00000042558.17	ENSMUST00000102617.5	1672	6	3208	446	3208	-446	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCACCTGCCCTCAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	126212288	126210285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126210659_126211095_126211197_126211512_126211698_126211776_126211985_126212191
ENSMUSG00000042558.17_126210461_126215260_1	chr4	-	815	6	FSM	ENSMUSG00000042558.17	ENSMUST00000102617.5	1672	6	236	621	236	-621	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCCGGAGAGCTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	126215260	126210460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_126210659_126211095_126211197_126211512_126211698_126211776_126211985_126212191_126212289_126215234
ENSMUSG00000042558.17_126210512_126215496_1	chr4	-	1000	6	FSM	ENSMUSG00000042558.17	ENSMUST00000102617.5	1672	6	0	672	0	-672	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAGCCACCATGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	126215496	126210511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_126210659_126211095_126211197_126211512_126211698_126211776_126211985_126212191_126212289_126215234
ENSMUSG00000042567.21_7462317_7532130_1	chr14	-	1917	12	NNC	ENSMUSG00000042567.21	novel	2177	14	NA	NA	7058	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTTATTCTAGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	7532130	7462316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_7463119_7468562_7468619_7468698_7468752_7470570_7470680_7482985_7483097_7489147_7489249_7499997_7500166_7500250_7500289_7512157_7512213_7513905_7513993_7514086_7514269_7531975
ENSMUSG00000042567.21_7462317_7532130_2	chr14	-	1910	12	NNC	ENSMUSG00000042567.21	novel	2177	14	NA	NA	7058	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTTATTCTAGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	7532130	7462316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_7463119_7468562_7468619_7468698_7468752_7470570_7470671_7482985_7483097_7489147_7489249_7499997_7500166_7500250_7500289_7512157_7512213_7513905_7513993_7514084_7514269_7531975
ENSMUSG00000042567.21_7462317_7532191_2	chr14	-	1979	12	NNC	ENSMUSG00000042567.21	novel	2177	14	NA	NA	6997	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTTATTCTAGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	7532191	7462316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_7463119_7468562_7468619_7468698_7468752_7470570_7470680_7482985_7483097_7489147_7489249_7499997_7500166_7500250_7500289_7512157_7512213_7513906_7513993_7514084_7514269_7531975
ENSMUSG00000042567.21_7462317_7532191_3	chr14	-	1970	12	NNC	ENSMUSG00000042567.21	novel	2177	14	NA	NA	6997	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTTATTCTAGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	7532191	7462316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_7463119_7468562_7468619_7468698_7468752_7470570_7470680_7482985_7483087_7489147_7489249_7499997_7500166_7500250_7500289_7512157_7512213_7513905_7513993_7514084_7514269_7531975
ENSMUSG00000042567.21_7462408_7539188_1	chr14	-	2088	14	FSM	ENSMUSG00000042567.21	ENST00000295720.10	2177	14	0	89	0	-89	multi-exon	FALSE	canonical	NA	NA	NA	NA	1576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGCTTGCTTAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	7539188	7462407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_7463119_7468562_7468619_7468698_7468752_7470570_7470680_7482985_7483097_7489147_7489249_7499997_7500166_7500250_7500289_7512157_7512213_7513905_7513993_7514084_7514269_7531975_7532190_7538442_7538514_7539058
ENSMUSG00000042567.21_7462527_7539188_1	chr14	-	1969	14	FSM	ENSMUSG00000042567.21	ENST00000295720.10	2177	14	0	208	0	-208	multi-exon	FALSE	canonical	NA	NA	NA	NA	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGACAGTATTTGTAACC	NA	NA	NA	NA	NA	NA	NA	NA	7539188	7462526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_7463119_7468562_7468619_7468698_7468752_7470570_7470680_7482985_7483097_7489147_7489249_7499997_7500166_7500250_7500289_7512157_7512213_7513905_7513993_7514084_7514269_7531975_7532190_7538442_7538514_7539058
ENSMUSG00000042567.21_7462527_7539188_2	chr14	-	1968	14	NNC	ENSMUSG00000042567.21	novel	2177	14	NA	NA	0	-208	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	806	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGACAGTATTTGTAACC	NA	NA	NA	NA	NA	NA	NA	NA	7539188	7462526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_7463119_7468562_7468619_7468698_7468752_7470570_7470680_7482985_7483097_7489147_7489249_7499997_7500166_7500251_7500289_7512157_7512213_7513905_7513993_7514084_7514269_7531975_7532190_7538442_7538514_7539058
ENSMUSG00000042567.21_7468559_7513992_1	chr14	-	752	9	ISM	ENSMUSG00000042567.21	ENST00000383771.8	1349	13	25196	-2	25196	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCAAGGTTTACTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	7513992	7468558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_7468619_7468698_7468752_7470570_7470680_7482985_7483097_7489147_7489249_7500027_7500166_7500250_7500289_7512157_7512213_7513905
ENSMUSG00000042567.21_7470569_7514268_1	chr14	-	825	8	ISM	ENSMUSG00000042567.21	ENST00000383771.8	1349	13	24920	2008	24920	-2008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGGACTGGCTTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	7514268	7470568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_7470680_7482985_7483097_7489147_7489249_7500027_7500166_7500250_7500289_7512157_7512213_7513905_7513993_7514084
ENSMUSG00000042567.21_7483071_7532115_1	chr14	-	769	8	ISM	ENSMUSG00000042567.21	ENST00000383771.8	1349	13	7073	14510	7073	-14510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAAGGGTTATAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	7532115	7483070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_7483097_7489147_7489249_7500027_7500166_7500250_7500289_7512157_7512213_7513905_7513993_7514084_7514269_7531975
ENSMUSG00000042569.14_60721505_60748724_1	chr11	+	980	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	48	525	0	-525	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCGGAAATCCAAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	60721504	60748724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
ENSMUSG00000042569.14_60739963_60748998_1	chr11	+	986	5	ISM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	18506	251	18458	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGACGTCCCTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	60739962	60748998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
ENSMUSG00000042569.14_60740014_60749050_1	chr11	+	987	5	ISM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	18557	199	18509	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAGCACCAGCCCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	60740013	60749050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
ENSMUSG00000042569.14_60742694_60749249_1	chr11	+	1043	4	ISM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	21237	0	21189	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGCTCTTAGTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	60742693	60749249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60742785_60743244_60743338_60746525_60746679_60748543
ENSMUSG00000042570.15_79376217_79377469_1	chr10	-	939	2	ISM	ENSMUSG00000042570.15	ENSMUST00000062855.15	2562	14	13456	138	325	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCCCGGTGTTGGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	79377469	79376216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79377034_79377347
ENSMUSG00000042570.15_79376626_79378457_1	chr10	-	933	4	ISM	ENSMUSG00000042570.15	ENSMUST00000062855.15	2562	14	12468	547	-663	-546	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACAGCGGGGTTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	79378457	79376625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430
ENSMUSG00000042570.15_79376755_79380448_1	chr10	-	997	5	ISM	ENSMUSG00000042570.15	ENSMUST00000062855.15	2562	14	10477	676	-2654	-675	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGGAGCCAGCCACCGG	NA	NA	NA	NA	NA	NA	NA	NA	79380448	79376754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353
ENSMUSG00000042570.15_79376927_79380954_1	chr10	-	983	7	ISM	ENSMUSG00000042570.15	ENSMUST00000062855.15	2562	14	9971	848	-3160	-847	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCAGGCCTGTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	79380954	79376926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878
ENSMUSG00000042570.15_79377502_79384251_1	chr10	-	932	8	ISM	ENSMUSG00000042570.15	ENSMUST00000062855.15	2562	14	6674	1423	-6457	-1422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAGCGAGGACACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	79384251	79377501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187
ENSMUSG00000042570.15_79377709_79385075_1	chr10	-	932	10	ISM	ENSMUSG00000042570.15	ENSMUST00000165028.8	2676	14	5958	1630	5850	-1629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCCTTCCTCAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	79385075	79377708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017
ENSMUSG00000042570.15_79378434_79385466_1	chr10	-	956	9	ISM	ENSMUSG00000042570.15	ENSMUST00000165028.8	2676	14	5567	2355	5459	-2354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTACGTGCTCATTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	79385466	79378433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370
ENSMUSG00000042570.15_79380535_79390989_1	chr10	-	947	9	ISM	ENSMUSG00000042570.15	ENSMUST00000165028.8	2676	14	44	4456	44	-4455	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGATCAGAGGTGGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	79390989	79380534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ENSMUSG00000042581.15_129523121_129540942_1	chr1	+	893	2	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	17	606070	17	-437147	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACCTGCCGTTCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	129523120	129540942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129523918_129540846
ENSMUSG00000042581.15_129523164_129541000_1	chr1	+	908	2	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	60	606012	60	-437089	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATATTGCTATTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	129523163	129541000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129523918_129540846
ENSMUSG00000042581.15_129523306_129556646_1	chr1	+	894	3	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	202	590366	202	-421443	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGTCTCTCTTCTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	129523305	129556646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129523918_129540846_129541096_129556613
ENSMUSG00000042581.15_129523336_129556749_1	chr1	+	967	3	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	232	590263	232	-421340	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAGCAACCATTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	129523335	129556749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129523918_129540846_129541096_129556613
ENSMUSG00000042581.15_129523503_129595602_1	chr1	+	886	4	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	399	551410	399	-382487	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTTTGCAATGTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	129523502	129595602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129523918_129540846_129541096_129556613_129556784_129595550
ENSMUSG00000042581.15_129523547_129595677_1	chr1	+	917	4	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	443	551335	443	-382412	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGCCATGATCCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	129523546	129595677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129523918_129540846_129541096_129556613_129556784_129595550
ENSMUSG00000042581.15_129523658_129605849_1	chr1	+	899	5	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	554	541163	554	-372240	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCAGAATCTGTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	129523657	129605849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129523918_129540846_129541096_129556613_129556784_129595550_129595707_129605785
ENSMUSG00000042581.15_129523737_129605927_1	chr1	+	898	5	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	633	541085	633	-372162	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAATGTGGCCTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	129523736	129605927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129523918_129540846_129541096_129556613_129556784_129595550_129595707_129605785
ENSMUSG00000042581.15_129523856_129686230_1	chr1	+	883	6	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	752	460782	752	-291859	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGCTTGTGAAATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	129523855	129686230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129523918_129540846_129541096_129556613_129556784_129595550_129595707_129605785_129605984_129686182
ENSMUSG00000042581.15_129541012_129688093_1	chr1	+	888	6	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	17908	458919	17908	-289996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGGGGTTCCTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	129541011	129688093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129541096_129556613_129556784_129595550_129595707_129605785_129605984_129686182_129686375_129688005
ENSMUSG00000042581.15_129556611_129688240_1	chr1	+	954	5	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	33507	458772	33507	-289849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCACCAGCCTTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	129556610	129688240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129556784_129595550_129595707_129605785_129605984_129686182_129686375_129688005
ENSMUSG00000042581.15_129556716_129704100_1	chr1	+	920	6	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	33612	442912	33612	-273989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTTCAGTGAGTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	129556715	129704100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129556784_129595550_129595707_129605785_129605984_129686182_129686375_129688005_129688241_129704029
ENSMUSG00000042581.15_129595608_129744445_1	chr1	+	906	6	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	72504	402567	72504	-233644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCCAGACACCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	129595607	129744445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129595707_129605785_129605984_129686182_129686375_129688005_129688241_129704029_129704146_129744379
ENSMUSG00000042581.15_129595658_129744509_1	chr1	+	920	6	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	72554	402503	72554	-233580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTAGTTACTTTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	129595657	129744509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129595707_129605785_129605984_129686182_129686375_129688005_129688241_129704029_129704146_129744379
ENSMUSG00000042581.15_129605784_129750432_1	chr1	+	977	6	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	82680	396580	82680	-227657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCAGGGTTCATGTATG	NA	NA	NA	NA	NA	NA	NA	NA	129605783	129750432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129605984_129686182_129686375_129688005_129688241_129704029_129704146_129744379_129744510_129750328
ENSMUSG00000042581.15_129605917_129843346_1	chr1	+	901	7	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	82813	303666	82813	-134743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAATGGCATGCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	129605916	129843346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129605984_129686182_129686375_129688005_129688241_129704029_129704146_129744379_129744510_129750328_129750433_129843289
ENSMUSG00000042581.15_129686312_129849052_1	chr1	+	911	7	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	163208	297960	163208	-129037	internal_fragment	TRUE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGATACGTTTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	129686311	129849052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129686375_129688005_129688241_129704029_129704146_129744379_129744510_129750328_129750433_129843289_129843485_129848984
ENSMUSG00000042581.15_129688067_129849160_1	chr1	+	895	6	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	164963	297852	164963	-128929	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATGTGGAGAAGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	129688066	129849160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129688241_129704029_129704146_129744379_129744510_129750328_129750433_129843289_129843485_129848984
ENSMUSG00000042581.15_129688210_129879186_1	chr1	+	903	7	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	165106	267826	165106	-98903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTGGGGTTCTTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	129688209	129879186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129688241_129704029_129704146_129744379_129744510_129750328_129750433_129843289_129843485_129848984_129849252_129879126
ENSMUSG00000042581.15_129704028_129879312_1	chr1	+	1000	6	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	180924	267700	180924	-98777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTTATGAACACACATAA	NA	NA	NA	NA	NA	NA	NA	NA	129704027	129879312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129704146_129744379_129744510_129750328_129750433_129843289_129843485_129848984_129849252_129879126
ENSMUSG00000042581.15_129744417_130030864_1	chr1	+	900	6	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	221313	116148	221313	52775	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGTCTCCATGCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	129744416	130030864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129744510_129750328_129750433_129843289_129843485_129848984_129849252_129879126_129879311_130030807
ENSMUSG00000042581.15_129750348_130044354_1	chr1	+	923	6	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	227244	102658	227244	66265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGCTCCCCAAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	129750347	130044354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129750433_129843289_129843485_129848984_129849252_129879126_129879311_130030807_130030942_130044296
ENSMUSG00000042581.15_129843276_130087345_1	chr1	+	980	6	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	320172	59667	320172	-59667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGCTGAGGCCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	129843275	130087345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129843485_129848984_129849252_129879126_129879311_130030807_130030942_130044296_130044448_130087310
ENSMUSG00000042581.15_129843402_130087375_1	chr1	+	884	6	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	320298	59637	320298	-59637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTGGGGAAGACTCGC	NA	NA	NA	NA	NA	NA	NA	NA	129843401	130087375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129843485_129848984_129849252_129879126_129879311_130030807_130030942_130044296_130044448_130087310
ENSMUSG00000042581.15_129848979_130090586_1	chr1	+	914	6	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	325875	56426	325875	-56426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTGGCCAGGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	129848978	130090586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129849252_129879126_129879311_130030807_130030942_130044296_130044448_130087310_130087453_130090556
ENSMUSG00000042581.15_129849096_130092810_1	chr1	+	908	7	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	325992	54202	325992	-54202	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTATTCCCTGTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	129849095	130092810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129849252_129879126_129879311_130030807_130030942_130044296_130044448_130087310_130087453_130090556_130090673_130092785
ENSMUSG00000042581.15_129849156_130092859_1	chr1	+	897	7	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	326052	54153	326052	-54153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGACAACATGGACAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	129849155	130092859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129849252_129879126_129879311_130030807_130030942_130044296_130044448_130087310_130087453_130090556_130090673_130092785
ENSMUSG00000042581.15_129849216_130092905_1	chr1	+	883	7	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	326112	54107	326112	-54107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGCTTCCCTACTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	129849215	130092905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129849252_129879126_129879311_130030807_130030942_130044296_130044448_130087310_130087453_130090556_130090673_130092785
ENSMUSG00000042581.15_129879126_130108235_1	chr1	+	993	7	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	356022	38777	356022	-38777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTCATGCCATGACACTT	NA	NA	NA	NA	NA	NA	NA	NA	129879125	130108235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_129879311_130030807_130030942_130044296_130044448_130087310_130087453_130090556_130090673_130092785_130092904_130108088
ENSMUSG00000042581.15_130030808_130116311_1	chr1	+	922	7	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	507704	30701	507704	-30701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAGAAGGAATCCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	130030807	130116311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_130030942_130044296_130044448_130087310_130087453_130090556_130090673_130092785_130092904_130108088_130108235_130116196
ENSMUSG00000042581.15_130090621_130122893_1	chr1	+	879	8	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	567517	24119	567517	-24119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCCTGGATTACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	130090620	130122893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_130090673_130092785_130092904_130108088_130108235_130116196_130116357_130117592_130117767_130117867_130117964_130120290_130120374_130122843
ENSMUSG00000042581.15_130108175_130145875_1	chr1	+	894	8	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	585071	1137	585071	-1137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCACTGACCTTGGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	130108174	130145875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_130108235_130116196_130116357_130117592_130117767_130117867_130117964_130120290_130120374_130122843_130123037_130137977_130138066_130145835
ENSMUSG00000042581.15_130116296_130146031_1	chr1	+	891	7	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	593192	981	593192	-981	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACGAATATGACAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	130116295	130146031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_130116357_130117592_130117767_130117867_130117964_130120290_130120374_130122843_130123037_130137977_130138066_130145835
ENSMUSG00000042581.15_130117628_130146141_1	chr1	+	905	6	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	594524	871	594524	-871	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGTTTTCCCAAGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	130117627	130146141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_130117767_130117867_130117964_130120290_130120374_130122843_130123037_130137977_130138066_130145835
ENSMUSG00000042581.15_130117693_130146197_1	chr1	+	896	6	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	594589	815	594589	-815	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAACCTGAAGGATTTCG	NA	NA	NA	NA	NA	NA	NA	NA	130117692	130146197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_130117767_130117867_130117964_130120290_130120374_130122843_130123037_130137977_130138066_130145835
ENSMUSG00000042581.15_130117895_130146319_1	chr1	+	917	5	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	594791	693	594791	-693	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCACTATATTAGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	130117894	130146319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_130117964_130120290_130120374_130122843_130123037_130137977_130138066_130145835
ENSMUSG00000042581.15_130122948_130146552_1	chr1	+	894	3	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	599844	460	599844	-460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAACTGGACTAGAGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	130122947	130146552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_130123037_130137977_130138066_130145835
ENSMUSG00000042581.15_130138003_130146667_1	chr1	+	895	2	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	614899	345	614899	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAACAAAAACCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	130138002	130146667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_130138066_130145835
ENSMUSG00000042594.17_121954375_121956343_1	chr5	-	1847	2	ISM	ENSMUSG00000042594.17	ENSMUST00000122426.8	2777	9	17824	-698	17824	-664	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCTTCAGAAGAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	121956343	121954374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121956157_121956278
ENSMUSG00000042594.17_121954748_121956712_1	chr5	-	1766	3	ISM	ENSMUSG00000042594.17	ENSMUST00000122426.8	2777	9	17455	-325	17455	325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAACTCCTAGACATGTT	NA	NA	NA	NA	NA	NA	NA	NA	121956712	121954747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121956157_121956278_121956451_121956527
ENSMUSG00000042594.17_121955073_121973952_1	chr5	-	2562	9	FSM	ENSMUSG00000042594.17	ENSMUST00000122426.8	2777	9	215	0	215	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTGGCAAGGGACATTCC	NA	NA	NA	NA	NA	NA	NA	NA	121973952	121955072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121973913
ENSMUSG00000042594.17_121956059_121974880_1	chr5	-	1805	9	FSM	ENSMUSG00000042594.17	ENSMUST00000086310.8	4195	9	42	2348	0	-706	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGAGGCTCTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	121974880	121956058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121974612
ENSMUSG00000042599.9_39118579_39122416_1	chr6	-	1943	3	ISM	ENSMUSG00000042599.9	ENST00000397560.7	6026	20	61196	1589	61196	-1589	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTTCTGTATTAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	39122416	39118578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39120240_39121225_39121494_39122402
ENSMUSG00000042599.9_39118691_39123810_1	chr6	-	1925	4	ISM	ENSMUSG00000042599.9	ENST00000397560.7	6026	20	59802	1701	59802	-1701	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTACAAATTCCTACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	39123810	39118690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788
ENSMUSG00000042599.9_39118761_39123850_1	chr6	-	1895	4	ISM	ENSMUSG00000042599.9	ENST00000397560.7	6026	20	59762	1771	59762	-1771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGTATCTCCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	39123850	39118760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788
ENSMUSG00000042599.9_39118837_39123970_1	chr6	-	1939	4	ISM	ENSMUSG00000042599.9	ENST00000397560.7	6026	20	59642	1847	59642	-1847	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAACTTTAAGATAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	39123970	39118836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788
ENSMUSG00000042599.9_39119044_39124706_1	chr6	-	1977	6	ISM	ENSMUSG00000042599.9	ENST00000397560.7	6026	20	58906	2054	58906	-2054	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATCTGCATAAAAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	39124706	39119043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637
ENSMUSG00000042599.9_39119192_39125917_1	chr6	-	1900	7	ISM	ENSMUSG00000042599.9	ENST00000397560.7	6026	20	57695	2202	57695	-2202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCATGTTTGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	39125917	39119191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875
ENSMUSG00000042599.9_39119222_39125999_1	chr6	-	1952	7	ISM	ENSMUSG00000042599.9	ENST00000397560.7	6026	20	57613	2232	57613	-2232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTTATAGGGAAAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	39125999	39119221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875
ENSMUSG00000042599.9_39119335_39126256_1	chr6	-	1906	8	ISM	ENSMUSG00000042599.9	ENST00000397560.7	6026	20	57356	2345	57356	-2345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCATTTCTCATTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	39126256	39119334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220
ENSMUSG00000042599.9_39119558_39128315_1	chr6	-	1896	9	ISM	ENSMUSG00000042599.9	ENSMUST00000002305.9	9566	20	55408	6001	55297	-2568	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGTATATGAAATCATT	NA	NA	NA	NA	NA	NA	NA	NA	39128315	39119557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128191
ENSMUSG00000042599.9_39119795_39135208_1	chr6	-	1896	11	ISM	ENSMUSG00000042599.9	ENSMUST00000002305.9	9566	20	48515	6238	48404	-2805	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTTAACAGCTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	39135208	39119794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128191_39128402_39129746_39129837_39135147
ENSMUSG00000042599.9_39119932_39143688_1	chr6	-	1985	13	ISM	ENSMUSG00000042599.9	ENSMUST00000002305.9	9566	20	40035	6375	39924	-2942	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTTAAAAAGAGACCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	39143688	39119931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128191_39128402_39129746_39129837_39135147_39135240_39142030_39142138_39143600
ENSMUSG00000042599.9_39120159_39146014_1	chr6	-	1898	14	ISM	ENSMUSG00000042599.9	ENSMUST00000002305.9	9566	20	37709	6602	37598	-3169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTTCGTGTGACAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	39146014	39120158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128191_39128402_39129746_39129837_39135147_39135240_39142030_39142138_39143600_39143689_39145874
ENSMUSG00000042599.9_39121419_39147767_1	chr6	-	1899	15	ISM	ENSMUSG00000042599.9	ENSMUST00000002305.9	9566	20	35956	7862	35845	-4429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGGACAGCAATAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	39147767	39121418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128191_39128402_39129746_39129837_39135147_39135240_39142030_39142138_39143600_39143689_39145874_39146038_39147057_39147245_39147702
ENSMUSG00000042599.9_39122449_39150274_1	chr6	-	1918	15	ISM	ENSMUSG00000042599.9	ENSMUST00000002305.9	9566	20	33449	8892	33338	-5459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTGGAATAAACAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	39150274	39122448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128191_39128402_39129746_39129837_39135147_39135240_39142030_39142138_39143600_39143689_39145874_39146038_39147057_39147245_39147702_39147845_39150211
ENSMUSG00000042599.9_39123976_39152403_1	chr6	-	1896	15	ISM	ENSMUSG00000042599.9	ENSMUST00000002305.9	9566	20	31320	10419	31209	-6986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGGAAGAAGCTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	39152403	39123975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128191_39128402_39129746_39129837_39135147_39135240_39142030_39142138_39143600_39143689_39145874_39146038_39147057_39147245_39147702_39147845_39150211_39150373_39152296
ENSMUSG00000042599.9_39124216_39183414_1	chr6	-	1917	16	ISM	ENSMUSG00000042599.9	ENSMUST00000002305.9	9566	20	309	10659	198	-7226	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAACATCACACTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	39183414	39124215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128191_39128402_39129746_39129837_39135147_39135240_39142030_39142138_39143600_39143689_39145874_39146038_39147057_39147245_39147702_39147845_39150211_39150373_39152296_39152415_39158461_39158548_39183374
ENSMUSG00000042605.17_121849672_121885532_1	chr5	+	765	3	ISM	ENSMUSG00000042605.17	ENST00000644883.1	2956	20	-386	55697	0	-55697	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTACCTGATTATTGG	NA	NA	NA	NA	NA	NA	NA	NA	121849671	121885532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121850340_121883785_121883823_121885472
ENSMUSG00000042605.17_121850163_121916038_1	chr5	+	707	7	ISM	ENSMUSG00000042605.17	ENST00000616825.4	4513	23	665	36974	59	-25191	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATTGAATCCAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	121850162	121916038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121850340_121883785_121883823_121885472_121885533_121887141_121887293_121910729_121910852_121915432_121915525_121915970
ENSMUSG00000042605.17_121850196_121910851_1	chr5	+	586	6	ISM	ENSMUSG00000042605.17	ENST00000644883.1	2956	20	138	30378	92	-30378	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCCCTCTGCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	121850195	121910851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729
ENSMUSG00000042605.17_121850196_121935387_1	chr5	+	2302	17	ISM	ENSMUSG00000042605.17	ENST00000644883.1	2956	20	138	5842	92	-5842	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCGCACCCAATATGAT	NA	NA	NA	NA	NA	NA	NA	NA	121850195	121935387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285
ENSMUSG00000042605.17_121850196_121952488_1	chr5	+	3153	23	FSM	ENSMUSG00000042605.17	ENST00000673283.1	3462	23	92	217	92	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGGAAGCACAGAAAACTAG	NA	NA	NA	NA	NA	NA	NA	NA	121850195	121952488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ENSMUSG00000042605.17_121850280_121935349_1	chr5	+	1982	16	ISM	ENSMUSG00000042605.17	ENST00000389153.10	3873	24	222	17655	176	-5880	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATCAGCAGCCAGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	121850279	121935349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285
ENSMUSG00000042605.17_121850307_121935824_1	chr5	+	2279	18	ISM	ENSMUSG00000042605.17	ENST00000644883.1	2956	20	249	5405	203	-5405	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAGCCAAGACATATAGA	NA	NA	NA	NA	NA	NA	NA	NA	121850306	121935824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787
ENSMUSG00000042605.17_121885492_121940189_1	chr5	+	2294	17	ISM	ENSMUSG00000042605.17	ENST00000647305.1	2990	20	35434	1040	35388	-1040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGCACCCAGCCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	121885491	121940189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935883_121940143
ENSMUSG00000042605.17_121887259_121940328_1	chr5	+	1971	14	ISM	ENSMUSG00000042605.17	ENST00000389153.10	3873	24	37201	12676	37155	-901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGCCAGTGGAACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	121887258	121940328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143
ENSMUSG00000042605.17_121887259_121941143_1	chr5	+	2336	16	ISM	ENSMUSG00000042605.17	ENST00000647305.1	2990	20	37201	86	37155	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAACCATTTTATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	121887258	121941143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935883_121940143_121940329_121941010
ENSMUSG00000042605.17_121915992_121949059_1	chr5	+	2035	14	ISM	ENSMUSG00000042605.17	ENST00000389153.10	3873	24	65934	3945	65888	-3428	internal_fragment	FALSE	canonical	NA	NA	NA	NA	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGAGAGGCGTGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	121915991	121949059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913
ENSMUSG00000042605.17_121916107_121951518_1	chr5	+	2463	17	NNC	ENSMUSG00000042605.17	novel	3865	25	NA	NA	66003	-969	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCCGGCGGTCCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	121916106	121951518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_121916169_121917480_121917664_121919359_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447
ENSMUSG00000042605.17_121916119_121949596_1	chr5	+	2057	15	ISM	ENSMUSG00000042605.17	ENST00000389153.10	3873	24	66061	3408	66015	-2891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGACAGTCTTCACCATCC	NA	NA	NA	NA	NA	NA	NA	NA	121916118	121949596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447
ENSMUSG00000042605.17_121919516_121952466_1	chr5	+	2022	15	ISM	ENSMUSG00000042605.17	ENST00000389153.10	3873	24	69458	538	69412	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTCTCCTGCTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	121919515	121952466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121919606_121921919_121922103_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ENSMUSG00000042605.17_121932997_121952823_1	chr5	+	1931	11	ISM	ENSMUSG00000042605.17	ENST00000389153.10	3873	24	82939	181	82893	71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGACAGAAGTTCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	121932996	121952823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ENSMUSG00000042605.17_121933034_121952961_1	chr5	+	2032	11	ISM	ENSMUSG00000042605.17	ENST00000389153.10	3873	24	82976	43	82930	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAACTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	121933033	121952961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ENSMUSG00000042605.17_121933136_121953012_1	chr5	+	1981	11	ISM	ENSMUSG00000042605.17	ENST00000389153.10	3873	24	83078	-8	83032	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCCAGTTAGTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	121933135	121953012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ENSMUSG00000042605.17_121935422_121949596_1	chr5	+	691	6	ISM	ENSMUSG00000042605.17	ENST00000673283.1	3462	23	85318	3109	85318	-2891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGACAGTCTTCACCATCC	NA	NA	NA	NA	NA	NA	NA	NA	121935421	121949596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447
ENSMUSG00000042613.10_89344013_89353671_1	chr3	+	839	8	FSM	ENSMUSG00000042613.10	ENST00000368460.7	860	8	-32	53	0	-53	multi-exon	FALSE	canonical	NA	NA	NA	NA	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCAAGGAGAACCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	89344012	89353671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89352900_89353379_89353481_89353586
ENSMUSG00000042613.10_89346821_89353724_1	chr3	+	820	7	ISM	ENSMUSG00000042613.10	ENST00000368460.7	860	8	2776	0	-23	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCAAGGGGGGGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	89346820	89353724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89352900_89353379_89353481_89353586
ENSMUSG00000042613.10_89350530_89354757_1	chr3	+	1117	7	ISM	ENSMUSG00000042613.10	ENST00000368463.8	2105	8	3686	822	3686	-822	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTGGCCTGGCTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	89350529	89354757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89350556_89350758_89350824_89350902_89351063_89352758_89352987_89353379_89353481_89353586_89353719_89354352
ENSMUSG00000042613.10_89350946_89354905_1	chr3	+	1131	5	ISM	ENSMUSG00000042613.10	ENST00000368463.8	2105	8	4102	674	4102	-674	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGAGAAGTGGCGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	89350945	89354905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89351063_89352758_89352987_89353379_89353481_89353586_89353719_89354352
ENSMUSG00000042613.10_89350984_89353647_1	chr3	+	469	4	ISM	ENSMUSG00000042613.10	ENST00000368463.8	2105	8	4140	1932	4140	-77	internal_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGGGTTTCTGCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	89350983	89353647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89351063_89352758_89352987_89353379_89353481_89353586
ENSMUSG00000042613.10_89351007_89354954_1	chr3	+	1119	5	ISM	ENSMUSG00000042613.10	ENST00000368463.8	2105	8	4163	625	4163	-625	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCGAGGAAGGAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	89351006	89354954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89351063_89352758_89352987_89353379_89353481_89353586_89353719_89354352
ENSMUSG00000042613.10_89352804_89354425_1	chr3	+	489	4	ISM	ENSMUSG00000042613.10	ENST00000368463.8	2105	8	5960	1154	5960	701	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCTGCAGCAGGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	89352803	89354425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89352987_89353379_89353481_89353586_89353719_89354352
ENSMUSG00000042613.10_89352864_89354470_1	chr3	+	474	4	ISM	ENSMUSG00000042613.10	ENST00000368463.8	2105	8	6020	1109	6020	746	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGCAGCAGCTAAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	89352863	89354470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89352987_89353379_89353481_89353586_89353719_89354352
ENSMUSG00000042613.10_89352920_89354518_1	chr3	+	466	4	ISM	ENSMUSG00000042613.10	ENST00000368463.8	2105	8	6076	1061	6076	794	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGGTGTAGATGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	89352919	89354518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89352987_89353379_89353481_89353586_89353719_89354352
ENSMUSG00000042613.10_89353397_89354625_1	chr3	+	489	3	ISM	ENSMUSG00000042613.10	ENST00000368463.8	2105	8	6553	954	6553	901	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGCATAAGCAGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	89353396	89354625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89353481_89353586_89353719_89354352
ENSMUSG00000042613.10_89353460_89354680_1	chr3	+	481	3	ISM	ENSMUSG00000042613.10	ENST00000368463.8	2105	8	6616	899	6616	-899	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTGGCAGCTGCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	89353459	89354680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89353481_89353586_89353719_89354352
ENSMUSG00000042613.10_89353660_89354783_1	chr3	+	490	2	ISM	ENSMUSG00000042613.10	ENST00000368463.8	2105	8	6816	796	6816	-796	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGGCCCAGACACTGC	NA	NA	NA	NA	NA	NA	NA	NA	89353659	89354783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89353719_89354352
ENSMUSG00000042613.10_89355174_89356213_1	chr3	+	633	2	ISM	ENSMUSG00000042613.10	ENSMUST00000038942.10	4479	11	11161	2046	8330	634	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCAACGCACTTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	89355173	89356213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89355573_89355979
ENSMUSG00000042613.10_89355334_89356307_1	chr3	+	567	2	ISM	ENSMUSG00000042613.10	ENSMUST00000038942.10	4479	11	11321	1952	8490	728	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAACTGTCTAAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	89355333	89356307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89355573_89355979
ENSMUSG00000042613.10_89355385_89356370_1	chr3	+	579	2	ISM	ENSMUSG00000042613.10	ENSMUST00000038942.10	4479	11	11372	1889	8541	791	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTGGGAGCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	89355384	89356370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89355573_89355979
ENSMUSG00000042616.9_125952397_125984162_1	chr4	+	3148	10	FSM	ENSMUSG00000042616.9	ENSMUST00000035497.5	5013	10	39	1826	0	1705	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTTCCTCACAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	125952396	125984162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_125952586_125967597_125967753_125970509_125970678_125971128_125971210_125976674_125976779_125977388_125977518_125978185_125978256_125980335_125980476_125981498_125981563_125982114
ENSMUSG00000042616.9_125952397_125984232_1	chr4	+	3218	10	FSM	ENSMUSG00000042616.9	ENSMUST00000035497.5	5013	10	39	1756	0	-1756	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTAACACATTGGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	125952396	125984232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_125952586_125967597_125967753_125970509_125970678_125971128_125971210_125976674_125976779_125977388_125977518_125978185_125978256_125980335_125980476_125981498_125981563_125982114
ENSMUSG00000042616.9_125952544_125984293_1	chr4	+	3132	10	FSM	ENSMUSG00000042616.9	ENSMUST00000035497.5	5013	10	186	1695	147	-1695	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTTGAGAGGCCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	125952543	125984293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_125952586_125967597_125967753_125970509_125970678_125971128_125971210_125976674_125976779_125977388_125977518_125978185_125978256_125980335_125980476_125981498_125981563_125982114
ENSMUSG00000042616.9_125967696_125984458_1	chr4	+	3157	9	ISM	ENSMUSG00000042616.9	ENSMUST00000035497.5	5013	10	15338	1530	15299	-1530	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTGATGTGCCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	125967695	125984458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_125967753_125970509_125970678_125971128_125971210_125976674_125976779_125977388_125977518_125978185_125978256_125980335_125980476_125981498_125981563_125982114
ENSMUSG00000042616.9_125970594_125984592_1	chr4	+	3150	8	ISM	ENSMUSG00000042616.9	ENSMUST00000035497.5	5013	10	18236	1396	18197	-1396	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGCCAACTGTCAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	125970593	125984592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_125970678_125971128_125971210_125976674_125976779_125977388_125977518_125978185_125978256_125980335_125980476_125981498_125981563_125982114
ENSMUSG00000042616.9_125976721_125984801_1	chr4	+	3148	6	ISM	ENSMUSG00000042616.9	ENSMUST00000035497.5	5013	10	24363	1187	24324	-1187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTCAATCCTGAAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	125976720	125984801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_125976779_125977388_125977518_125978185_125978256_125980335_125980476_125981498_125981563_125982114
ENSMUSG00000042616.9_125977486_125984943_1	chr4	+	3135	5	ISM	ENSMUSG00000042616.9	ENSMUST00000035497.5	5013	10	25128	1045	25089	-1045	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTTTTTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	125977485	125984943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_125977518_125978185_125978256_125980335_125980476_125981498_125981563_125982114
ENSMUSG00000042616.9_125980423_125985134_1	chr4	+	3137	3	ISM	ENSMUSG00000042616.9	ENSMUST00000035497.5	5013	10	28065	854	28026	-854	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATAAATCCAACAACAT	NA	NA	NA	NA	NA	NA	NA	NA	125980422	125985134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_125980476_125981498_125981563_125982114
ENSMUSG00000042622.15_79231720_79242254_1	chr15	+	867	2	NNC	ENSMUSG00000042622.15	novel	905	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCGTTAGGGTTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	79231719	79242254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_79231955_79241622
ENSMUSG00000042622.15_79231720_79242254_2	chr15	+	869	2	FSM	ENSMUSG00000042622.15	ENST00000538999.1	905	2	36	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCGTTAGGGTTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	79231719	79242254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_79231955_79241620
ENSMUSG00000042625.17_56869939_56873428_1	chr17	-	903	7	ISM	ENSMUSG00000042625.17	ENSMUST00000075510.12	3277	21	18157	0	18157	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCTGCTGCCAGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	56873428	56869938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325
ENSMUSG00000042625.17_56873570_56882519_1	chr17	-	980	9	ISM	ENSMUSG00000042625.17	ENSMUST00000075510.12	3277	21	9066	3631	9066	-3631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGACGGGAGAAGGCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	56882519	56873569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354
ENSMUSG00000042625.17_56882792_56891512_1	chr17	-	908	7	ISM	ENSMUSG00000042625.17	ENSMUST00000075510.12	3277	21	73	12853	73	-12853	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTAGCTTTGGCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	56891512	56882791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ENSMUSG00000042626.14_89328949_89337001_1	chr3	+	2433	11	FSM	ENSMUSG00000042626.14	ENST00000368449.8	2408	11	-24	-1	14	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTTTTTTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	89328948	89337001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89329211_89331023_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623_89336403_89336570
ENSMUSG00000042626.14_89328949_89337001_2	chr3	+	2427	11	NNC	ENSMUSG00000042626.14	novel	2408	11	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	967	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTTTTTTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	89328948	89337001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_89329205_89331023_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623_89336403_89336570
ENSMUSG00000042626.14_89328949_89337001_3	chr3	+	2429	11	NNC	ENSMUSG00000042626.14	novel	2408	11	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTTTTTTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	89328948	89337001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_89329211_89331023_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334249_89334378_89334514_89334754_89335623_89336403_89336570
ENSMUSG00000042626.14_89328949_89337001_4	chr3	+	2432	11	NNC	ENSMUSG00000042626.14	novel	2408	11	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTTTTTTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	89328948	89337001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_89329211_89331023_89331124_89331496_89331551_89331861_89331914_89332073_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623_89336403_89336570
ENSMUSG00000042626.14_89328949_89337001_5	chr3	+	2430	11	NNC	ENSMUSG00000042626.14	novel	2408	11	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTTTTTTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	89328948	89337001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_89329211_89331023_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334751_89335623_89336403_89336570
ENSMUSG00000042626.14_89329130_89332199_1	chr3	+	1011	7	ISM	ENSMUSG00000042626.14	ENSMUST00000094378.10	2617	12	195	4207	157	-4207	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGGTGGGAGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	89329129	89332199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072
ENSMUSG00000042626.14_89329130_89337001_1	chr3	+	2249	11	NNC	ENSMUSG00000042626.14	novel	2408	11	NA	NA	157	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTTTTTTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	89329129	89337001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_89329211_89331023_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334751_89335623_89336403_89336570
ENSMUSG00000042626.14_89329130_89337001_2	chr3	+	2252	11	FSM	ENSMUSG00000042626.14	ENST00000368449.8	2408	11	157	-1	157	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTTTTTTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	89329129	89337001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89329211_89331023_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623_89336403_89336570
ENSMUSG00000042626.14_89329130_89337001_3	chr3	+	2248	11	NNC	ENSMUSG00000042626.14	novel	2408	11	NA	NA	157	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTTTTTTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	89329129	89337001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_89329211_89331023_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334249_89334378_89334514_89334754_89335623_89336403_89336570
ENSMUSG00000042626.14_89329130_89337001_4	chr3	+	2251	11	NNC	ENSMUSG00000042626.14	novel	2408	11	NA	NA	157	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	497	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTTTTTTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	89329129	89337001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_89329211_89331023_89331124_89331496_89331551_89331861_89331914_89332073_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623_89336403_89336570
ENSMUSG00000042626.14_89329298_89333907_1	chr3	+	929	8	ISM	ENSMUSG00000042626.14	ENSMUST00000094378.10	2617	12	363	2499	325	-2499	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCCTCTTGGTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	89329297	89333907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821
ENSMUSG00000042626.14_89329578_89334349_1	chr3	+	924	10	ISM	ENSMUSG00000042626.14	ENSMUST00000094378.10	2617	12	643	2057	605	-2057	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCACCCCGAGACCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	89329577	89334349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245
ENSMUSG00000042632.18_79170756_79192997_1	chr15	-	1951	13	ISM	ENSMUSG00000042632.18	ENST00000332509.8	2822	17	19455	-1	19167	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGACCCCACATATCAG	NA	NA	NA	NA	NA	NA	NA	NA	79192997	79170755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868
ENSMUSG00000042632.18_79170756_79192997_2	chr15	-	1809	12	ISM	ENSMUSG00000042632.18	ENST00000664587.1	2560	16	19455	-1	19167	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGACCCCACATATCAG	NA	NA	NA	NA	NA	NA	NA	NA	79192997	79170755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186921_79189902_79190012_79190483_79190667_79191512_79191610_79192868
ENSMUSG00000042632.18_79170928_79196020_1	chr15	-	1865	14	ISM	ENSMUSG00000042632.18	ENST00000332509.8	2822	17	16432	171	16144	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGCCAAGCTGGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	79196020	79170927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993
ENSMUSG00000042632.18_79170971_79190517_1	chr15	-	1196	10	ISM	ENSMUSG00000042632.18	ENST00000402064.5	2537	16	21935	214	21647	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCTGTCTCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	79190517	79170970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483
ENSMUSG00000042632.18_79170992_79196063_1	chr15	-	1844	14	ISM	ENSMUSG00000042632.18	ENST00000332509.8	2822	17	16389	235	16101	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTTCCAGAAGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	79196063	79170991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993
ENSMUSG00000042632.18_79171029_79196081_1	chr15	-	1683	13	ISM	ENSMUSG00000042632.18	ENST00000664587.1	2560	16	16371	272	16083	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGAGACCGAGGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	79196081	79171028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186921_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993
ENSMUSG00000042632.18_79171035_79190557_1	chr15	-	1172	10	ISM	ENSMUSG00000042632.18	ENST00000402064.5	2537	16	21895	278	21607	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCCCTCTGGGAGACCGA	NA	NA	NA	NA	NA	NA	NA	NA	79190557	79171034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483
ENSMUSG00000042632.18_79171038_79196121_1	chr15	-	1856	14	ISM	ENSMUSG00000042632.18	ENST00000332509.8	2822	17	16331	281	16043	-281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAACGCCCTCTGGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	79196121	79171037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993
ENSMUSG00000042632.18_79171310_79190666_1	chr15	-	1220	9	ISM	ENSMUSG00000042632.18	ENST00000402064.5	2537	16	21786	553	21498	-553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTTCAGGGCTCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	79190666	79171309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483
ENSMUSG00000042632.18_79171310_79197197_1	chr15	-	1904	14	ISM	ENSMUSG00000042632.18	ENST00000332509.8	2822	17	15255	553	14967	-553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTTCAGGGCTCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	79197197	79171309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147
ENSMUSG00000042632.18_79171816_79191609_1	chr15	-	1243	9	ISM	ENSMUSG00000042632.18	ENST00000402064.5	2537	16	20843	1059	20555	-1059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTGGAATTCTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	79191609	79171815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512
ENSMUSG00000042632.18_79171935_79192997_1	chr15	-	1253	10	ISM	ENSMUSG00000042632.18	ENST00000402064.5	2537	16	19455	1178	19167	-1178	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAAGTCCCCTCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	79192997	79171934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868
ENSMUSG00000042632.18_79171935_79197363_1	chr15	-	1877	13	ISM	ENSMUSG00000042632.18	ENST00000332509.8	2822	17	15089	1178	14801	-1178	internal_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAAGTCCCCTCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	79197363	79171934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147
ENSMUSG00000042632.18_79173371_79202014_1	chr15	-	1842	13	ISM	ENSMUSG00000042632.18	ENST00000332509.8	2822	17	10438	2614	10150	-2614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGAAATCCATGAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	79202014	79173370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960
ENSMUSG00000042632.18_79173371_79202039_1	chr15	-	1725	12	ISM	ENSMUSG00000042632.18	ENST00000664587.1	2560	16	10413	2614	10125	-2614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGAAATCCATGAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	79202039	79173370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186921_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960
ENSMUSG00000042632.18_79173371_79202068_1	chr15	-	1896	13	ISM	ENSMUSG00000042632.18	ENST00000332509.8	2822	17	10384	2614	10096	-2614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGAAATCCATGAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	79202068	79173370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960
ENSMUSG00000042632.18_79173371_79202212_1	chr15	-	2040	13	ISM	ENSMUSG00000042632.18	ENST00000332509.8	2822	17	10240	2614	9952	-2614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGAAATCCATGAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	79202212	79173370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960
ENSMUSG00000042632.18_79173799_79202212_1	chr15	-	1763	11	ISM	ENSMUSG00000042632.18	ENST00000664587.1	2560	16	10240	3042	9952	-3042	internal_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGACTCAGCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	79202212	79173798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79173916_79181498_79181650_79183231_79183396_79186818_79186921_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960
ENSMUSG00000042632.18_79173856_79196119_1	chr15	-	1157	9	ISM	ENSMUSG00000042632.18	ENST00000402064.5	2537	16	16333	3099	16045	-3099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGATGCTCCCGAAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	79196119	79173855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993
ENSMUSG00000042632.18_79173875_79202212_1	chr15	-	1687	11	ISM	ENSMUSG00000042632.18	ENST00000664587.1	2560	16	10240	3118	9952	-3118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCACCTATTCCGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	79202212	79173874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79173916_79181498_79181650_79183231_79183396_79186818_79186921_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960
ENSMUSG00000042632.18_79181523_79197199_1	chr15	-	1183	9	ISM	ENSMUSG00000042632.18	ENST00000402064.5	2537	16	15253	10766	14965	-10766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGACAGATGTCAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	79197199	79181522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147
ENSMUSG00000042632.18_79181584_79197244_1	chr15	-	1167	9	ISM	ENSMUSG00000042632.18	ENST00000402064.5	2537	16	15208	10827	14920	-10827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTATGAGTCTGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	79197244	79181583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147
ENSMUSG00000042632.18_79181634_79197295_1	chr15	-	1168	9	ISM	ENSMUSG00000042632.18	ENST00000402064.5	2537	16	15157	10877	14869	-10877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCGTGGTGTGTACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	79197295	79181633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147
ENSMUSG00000042632.18_79183336_79201997_1	chr15	-	1153	9	ISM	ENSMUSG00000042632.18	ENST00000402064.5	2537	16	10455	12579	10167	-12579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATCGCCATCGAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	79201997	79183335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960
ENSMUSG00000042632.18_79196006_79241753_1	chr15	-	733	4	ISM	ENSMUSG00000042632.18	ENST00000660610.1	2980	17	226	25249	226	-25249	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGCTACAGGTGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	79241753	79196005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79196178_79197147_79197364_79201960_79202206_79241653
ENSMUSG00000042632.18_79196113_79212376_1	chr15	-	618	4	ISM	ENSMUSG00000042632.18	ENST00000332509.8	2822	17	76	25356	0	-25356	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGAGATCCTGGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	79212376	79196112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79196178_79197147_79197364_79201960_79202206_79212284
ENSMUSG00000042632.18_79197210_79241941_1	chr15	-	687	3	ISM	ENSMUSG00000042632.18	ENST00000660610.1	2980	17	38	26453	38	-26453	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACACACCTAGCCGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	79241941	79197209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79197364_79201960_79202206_79241653
ENSMUSG00000042641.20_153669832_153697258_1	chr1	-	1246	9	ISM	ENSMUSG00000042641.20	ENSMUST00000238926.2	3747	22	22630	14700	-13348	-333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTAATTCTTTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	153697258	153669831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153669973_153675539_153675715_153677981_153678112_153679759_153679875_153680355_153680474_153683426_153683621_153687959_153688063_153693249_153693358_153697096
ENSMUSG00000042641.20_153675643_153701084_1	chr1	-	1189	10	ISM	ENSMUSG00000042641.20	ENSMUST00000238926.2	3747	22	18804	20511	-17174	-6144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGAGACACGGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	153701084	153675642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153675715_153677981_153678112_153679759_153679875_153680355_153680474_153683426_153683621_153687959_153688063_153693249_153693358_153697096_153697320_153698054_153698118_153701021
ENSMUSG00000042641.20_153683453_153701513_1	chr1	-	1157	6	ISM	ENSMUSG00000042641.20	ENSMUST00000238926.2	3747	22	18375	28321	-17603	-13954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTCCACGGAAAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	153701513	153683452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153683621_153687959_153688063_153693249_153693358_153697096_153697320_153698054_153698118_153701021
ENSMUSG00000042641.20_153683531_153701612_1	chr1	-	1178	6	ISM	ENSMUSG00000042641.20	ENSMUST00000238926.2	3747	22	18276	28399	-17702	-14032	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGATAGCCGTACAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	153701612	153683530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153683621_153687959_153688063_153693249_153693358_153697096_153697320_153698054_153698118_153701021
ENSMUSG00000042641.20_153697097_153701989_1	chr1	-	1254	3	ISM	ENSMUSG00000042641.20	ENST00000294854.13	2950	17	17891	27598	17891	-27598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGCAGTCACTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	153701989	153697096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153697320_153698054_153698118_153701021
ENSMUSG00000042641.20_153697261_153703259_1	chr1	-	1163	4	ISM	ENSMUSG00000042641.20	ENST00000294854.13	2950	17	16621	27762	16621	-27762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACATCCTCCTTTACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	153703259	153697260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153697320_153698054_153698118_153701021_153701990_153703186
ENSMUSG00000042641.20_153701260_153717571_1	chr1	-	1157	5	ISM	ENSMUSG00000042641.20	ENST00000294854.13	2950	17	2309	31761	2309	-31761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGGACCTTTGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	153717571	153701259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153701990_153703186_153703349_153713800_153713931_153715467_153715543_153717511
ENSMUSG00000042642.14_89309276_89313221_1	chr3	-	1657	4	ISM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	5949	0	3271	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAATGAGGGCATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	89313221	89309275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161
ENSMUSG00000042642.14_89309444_89314788_1	chr3	-	1601	5	ISM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	4382	168	1704	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTGAGACTACGGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	89314788	89309443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715
ENSMUSG00000042642.14_89309618_89315846_1	chr3	-	1620	6	ISM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	3324	342	646	-342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGACTCCTGGAGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	89315846	89309617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728
ENSMUSG00000042642.14_89309677_89315896_1	chr3	-	1611	6	ISM	ENSMUSG00000042642.14	ENSMUST00000107426.8	2238	8	3280	-297	596	297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTGCAGCTTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	89315896	89309676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728
ENSMUSG00000042642.14_89309974_89316116_1	chr3	-	1534	6	ISM	ENSMUSG00000042642.14	ENSMUST00000107426.8	2238	8	3060	0	376	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCTTCTGCTGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	89316116	89309973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728
ENSMUSG00000042642.14_89310236_89318544_1	chr3	-	1709	7	ISM	ENSMUSG00000042642.14	ENSMUST00000107426.8	2238	8	632	262	624	255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGCCCACCAAAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	89318544	89310235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464
ENSMUSG00000042642.14_89310335_89318539_1	chr3	-	1605	7	ISM	ENSMUSG00000042642.14	ENSMUST00000107426.8	2238	8	637	361	629	156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGATCTGAACTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	89318539	89310334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464
ENSMUSG00000042642.14_89310486_89316491_1	chr3	-	1094	4	NNC	ENSMUSG00000042642.14	novel	1092	4	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAATGTGATCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	89316491	89310485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_89310609_89310803_89310913_89313161_89313261_89315728
ENSMUSG00000042642.14_89310486_89316491_2	chr3	-	1096	4	FSM	ENSMUSG00000042642.14	ENST00000295530.6	1092	4	1	-5	1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAATGTGATCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	89316491	89310485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89310609_89310803_89310915_89313161_89313261_89315728
ENSMUSG00000042642.14_89312882_89318761_2	chr3	-	1569	4	FSM	ENSMUSG00000042642.14	ENST00000368433.5	1976	4	407	0	407	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGGATTGTTGGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	89318761	89312881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89313261_89314715_89314864_89315728_89316474_89318464
ENSMUSG00000042642.14_89314716_89319113_1	chr3	-	1542	3	ISM	ENSMUSG00000042642.14	ENST00000368433.5	1976	4	55	1834	55	-1834	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCTACCCCTGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	89319113	89314715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89314864_89315728_89316474_89318464
ENSMUSG00000042650.4_60429835_60445193_1	chr11	+	554	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	1031	4145	1031	-4145	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCAGCCAGCAGCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	60429834	60445193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
ENSMUSG00000042650.4_60444643_60445607_1	chr11	+	597	2	ISM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	15839	3731	15839	-3731	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGCCTTTTCTTCCACT	NA	NA	NA	NA	NA	NA	NA	NA	60444642	60445607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60444696_60445063
ENSMUSG00000042660.9_36893273_36895433_1	chr18	+	476	4	ISM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	0	1430	0	-1430	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGAGAATGCTCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	36893272	36895433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407
ENSMUSG00000042660.9_36893400_36895553_1	chr18	+	469	4	ISM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	127	1310	127	-1310	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACCCAGCCAAAAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	36893399	36895553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407
ENSMUSG00000042660.9_36893512_36895759_1	chr18	+	440	5	ISM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	239	1104	239	-1104	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCTCAGAGCCTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	36893511	36895759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710
ENSMUSG00000042660.9_36895405_36896196_1	chr18	+	505	4	ISM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	2132	667	2132	-667	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCCTGTGGAGGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	36895404	36896196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36895588_36895710_36895811_36895901_36896072_36896144
ENSMUSG00000042660.9_36895711_36896368_1	chr18	+	494	3	ISM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	2438	495	2438	-495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGCACGGACGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	36895710	36896368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36895811_36895901_36896072_36896144
ENSMUSG00000042660.9_36895988_36896540_1	chr18	+	480	2	ISM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	2715	323	2715	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAACCTACCACCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	36895987	36896540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36896072_36896144
ENSMUSG00000042660.9_36896054_36896587_1	chr18	+	461	2	ISM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	2781	276	2781	-276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATATTCTGTGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	36896053	36896587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36896072_36896144
ENSMUSG00000042662.17_152784793_152793618_1	chr2	-	1090	7	FSM	ENSMUSG00000042662.17	ENST00000375966.8	1052	7	-38	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1058	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTGGCCGGGTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	152793618	152784792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152785374_152786070_152786243_152787346_152787422_152788207_152788258_152790957_152791041_152792540_152792575_152793523
ENSMUSG00000042670.6_105738702_105794582_1	chr2	+	481	5	ISM	ENSMUSG00000042670.6	ENSMUST00000037499.6	955	7	3719	1321	3719	-1181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTATGGACCTATACCA	NA	NA	NA	NA	NA	NA	NA	NA	105738701	105794582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105794524
ENSMUSG00000042670.6_105761146_105795688_1	chr2	+	243	3	FSM	ENSMUSG00000042670.6	ENST00000526776.5	395	3	77	75	77	-75	multi-exon	FALSE	canonical	NA	NA	NA	NA	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTACTGTCTCCTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	105761145	105795688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_105761198_105794524_105794636_105795608
ENSMUSG00000042670.6_105761146_105795688_2	chr2	+	237	3	NNC	ENSMUSG00000042670.6	novel	395	3	NA	NA	77	-75	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTACTGTCTCCTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	105761145	105795688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_105761192_105794524_105794636_105795608
ENSMUSG00000042670.6_105761146_105795688_3	chr2	+	459	5	ISM	ENSMUSG00000042670.6	ENSMUST00000037499.6	955	7	26163	215	77	-75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTACTGTCTCCTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	105761145	105795688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_105761198_105763609_105763699_105767336_105767464_105794524_105794636_105795608
ENSMUSG00000042670.6_105767433_105795903_1	chr2	+	437	3	ISM	ENSMUSG00000042670.6	ENSMUST00000037499.6	955	7	32450	0	6364	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGACTATCTCATATTTG	NA	NA	NA	NA	NA	NA	NA	NA	105767432	105795903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_105767464_105794524_105794636_105795608
ENSMUSG00000042670.6_105794524_105795763_1	chr2	+	266	2	NNC	ENSMUSG00000042670.6	novel	395	3	NA	NA	33455	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATTTATGTTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	105794523	105795763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_105794636_105795609
ENSMUSG00000042670.6_105794524_105795763_2	chr2	+	262	2	NNC	ENSMUSG00000042670.6	novel	395	3	NA	NA	33455	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATTTATGTTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	105794523	105795763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_105794629_105795606
ENSMUSG00000042671.13_153541455_153566748_1	chr1	+	487	6	ISM	ENSMUSG00000042671.13	ENST00000483095.6	1415	7	73	2515	0	-1944	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGTCACCAAGGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	153541454	153566748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_153541460_153541581_153541663_153543570_153543700_153546528_153546631_153547499_153547565_153566643
ENSMUSG00000042671.13_153541580_153568523_1	chr1	+	599	6	FSM	ENSMUSG00000042671.13	ENSMUST00000111810.2	5614	6	125	4890	125	-169	multi-exon	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGACTTGTTTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	153541579	153568523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_153541663_153543570_153543700_153546528_153546631_153547499_153547565_153566643_153566811_153568470
ENSMUSG00000042671.13_153543571_153568523_1	chr1	+	516	5	ISM	ENSMUSG00000042671.13	ENST00000483095.6	1415	7	2189	740	2116	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGACTTGTTTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	153543570	153568523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_153543700_153546528_153546631_153547499_153547565_153566643_153566811_153568470
ENSMUSG00000042671.13_153543656_153568692_1	chr1	+	600	5	ISM	ENSMUSG00000042671.13	ENST00000483095.6	1415	7	2274	571	2201	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTTGCTGCCAAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	153543655	153568692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_153543700_153546528_153546631_153547499_153547565_153566643_153566811_153568470
ENSMUSG00000042671.13_153546520_153568692_1	chr1	+	565	4	ISM	ENSMUSG00000042671.13	ENSMUST00000111814.8	678	6	5101	0	5065	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTTGCTGCCAAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	153546519	153568692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_153546631_153547499_153547565_153566643_153566811_153568470
ENSMUSG00000042671.13_153566677_153568843_1	chr1	+	507	2	ISM	ENSMUSG00000042671.13	ENSMUST00000111814.8	678	6	25258	-151	25222	112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCCAGATTTGTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	153566676	153568843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_153566811_153568470
ENSMUSG00000042672.16_89257662_89259797_1	chr3	-	184	2	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	11826	78	11826	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAACGGCTCTGCCCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	89259797	89257661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89257822_89259773
ENSMUSG00000042672.16_89257711_89259849_1	chr3	-	187	2	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	11774	127	11774	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACACCAGACTGCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	89259849	89257710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89257822_89259773
ENSMUSG00000042672.16_89257797_89260060_1	chr3	-	190	3	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	11563	213	11563	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCGCCGGTGCCCTCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	89260060	89257796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89257822_89259773_89259888_89260009
ENSMUSG00000042672.16_89260128_89260860_1	chr3	-	181	3	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	10763	2544	10763	-2544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCCAGGGATTACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	89260860	89260127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89260153_89260572_89260690_89260821
ENSMUSG00000042672.16_89260653_89261120_1	chr3	-	180	3	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	10503	3069	10503	-3069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTCGCCAAGCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	89261120	89260652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89260690_89260821_89260949_89261104
ENSMUSG00000042672.16_89260936_89261497_1	chr3	-	209	3	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	10126	3352	10126	-3352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGACTCTGCCTATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	89261497	89260935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89260949_89261104_89261201_89261397
ENSMUSG00000042672.16_89261397_89263649_1	chr3	-	207	2	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	7974	3813	7974	-3813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGAACTCAACTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	89263649	89261396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89261498_89263543
ENSMUSG00000042672.16_89263544_89264153_1	chr3	-	190	2	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	7470	5960	7470	-5960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCACCGGCCCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	89264153	89263543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89263705_89264124
ENSMUSG00000042672.16_89263599_89264203_1	chr3	-	185	2	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	7420	6015	7420	-6015	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGGGCTGCTGCACGTG	NA	NA	NA	NA	NA	NA	NA	NA	89264203	89263598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89263705_89264124
ENSMUSG00000042672.16_89263673_89264797_1	chr3	-	172	3	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	6826	6089	6826	-6089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCACGAACTGGGAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	89264797	89263672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89263705_89264124_89264247_89264779
ENSMUSG00000042672.16_89264815_89265127_1	chr3	-	211	2	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	6496	7231	6496	-7231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGTTCAAGTTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	89265127	89264814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89264924_89265025
ENSMUSG00000042672.16_89264900_89265171_1	chr3	-	170	2	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	6452	7316	6452	-7316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTACCGCTGGTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	89265171	89264899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89264924_89265025
ENSMUSG00000042672.16_89265070_89265916_1	chr3	-	212	2	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	5707	7486	5707	-7486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACAGATGGTGTATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	89265916	89265069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89265234_89265868
ENSMUSG00000042672.16_89265148_89265939_1	chr3	-	157	2	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	5684	7564	5684	-7564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCATCTGAGGACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	89265939	89265147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89265234_89265868
ENSMUSG00000042672.16_89265182_89266009_1	chr3	-	193	2	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	5614	7598	5614	-7598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGATGGATGAACAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	89266009	89265181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89265234_89265868
ENSMUSG00000042675.16_126376319_126379686_1	chr7	+	881	5	FSM	ENSMUSG00000042675.16	ENSMUST00000170882.8	1050	5	172	-3	-66	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGGCTCACATGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	126376318	126379686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126376376_126376942_126377126_126377225_126377270_126377477_126377587_126379198
ENSMUSG00000042678.18_60396811_60401444_1	chr11	+	1217	12	ISM	ENSMUSG00000042678.18	ENST00000644795.1	2321	22	9	13889	9	-13889	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCGGTTGACATGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	60396810	60401444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60396910_60397116_60397177_60397667_60397744_60398059_60398176_60398260_60398380_60399017_60399160_60399715_60399828_60399903_60399979_60400359_60400539_60400757_60400874_60401052_60401126_60401394
ENSMUSG00000042678.18_60397678_60402006_1	chr11	+	1201	12	ISM	ENSMUSG00000042678.18	ENST00000644795.1	2321	22	876	13327	876	-13327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCACAGACAACAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	60397677	60402006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60397744_60398059_60398176_60398260_60398380_60399017_60399160_60399715_60399828_60399903_60399979_60400359_60400539_60400757_60400874_60401052_60401126_60401394_60401468_60401680_60401755_60401950
ENSMUSG00000042678.18_60398059_60405855_1	chr11	+	1294	12	ISM	ENSMUSG00000042678.18	ENST00000644795.1	2321	22	1257	9478	1257	-9478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAGGCTCTGAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	60398058	60405855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60398176_60398260_60398380_60399017_60399160_60399715_60399828_60399903_60399979_60400359_60400539_60400757_60400874_60401052_60401126_60401394_60401468_60401680_60401755_60401950_60402034_60405724
ENSMUSG00000042678.18_60398260_60408068_1	chr11	+	1273	12	ISM	ENSMUSG00000042678.18	ENST00000644795.1	2321	22	1458	7265	1458	-7265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTACAGCAGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	60398259	60408068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60398380_60399017_60399160_60399715_60399828_60399903_60399979_60400359_60400539_60400757_60400874_60401052_60401126_60401394_60401468_60401680_60401755_60401950_60402034_60405724_60405856_60407973
ENSMUSG00000042678.18_60399080_60409269_1	chr11	+	1225	13	ISM	ENSMUSG00000042678.18	ENST00000644795.1	2321	22	2278	6064	2278	-6064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTTGATGAGTATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	60399079	60409269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60399160_60399715_60399828_60399903_60399979_60400359_60400539_60400757_60400874_60401052_60401126_60401394_60401468_60401680_60401755_60401950_60402034_60405724_60405856_60407973_60408069_60408286_60408365_60409213
ENSMUSG00000042678.18_60399768_60411637_1	chr11	+	1194	13	ISM	ENSMUSG00000042678.18	ENST00000644795.1	2321	22	2966	3696	2966	-3696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGTGGACGGGGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	60399767	60411637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60399828_60399903_60399979_60400359_60400539_60400757_60400874_60401052_60401126_60401394_60401468_60401680_60401755_60401950_60402034_60405724_60405856_60407973_60408069_60408286_60408365_60409213_60409311_60411577
ENSMUSG00000042678.18_60400360_60412585_1	chr11	+	1294	12	ISM	ENSMUSG00000042678.18	ENST00000644795.1	2321	22	3558	2748	3558	-2748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCACCTGTCTACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	60400359	60412585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60400539_60400757_60400874_60401052_60401126_60401394_60401468_60401680_60401755_60401950_60402034_60405724_60405856_60407973_60408069_60408286_60408365_60409213_60409311_60411577_60411739_60412451
ENSMUSG00000042678.18_60400493_60414873_1	chr11	+	1205	13	ISM	ENSMUSG00000042678.18	ENST00000644795.1	2321	22	3691	460	3691	-460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCGGTGACACCTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	60400492	60414873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60400539_60400757_60400874_60401052_60401126_60401394_60401468_60401680_60401755_60401950_60402034_60405724_60405856_60407973_60408069_60408286_60408365_60409213_60409311_60411577_60411739_60412451_60412586_60414829
ENSMUSG00000042678.18_60401052_60415333_1	chr11	+	1219	12	ISM	ENSMUSG00000042678.18	ENST00000644795.1	2321	22	4250	0	4250	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGACGTCTGCCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	60401051	60415333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_60401126_60401394_60401468_60401680_60401755_60401950_60402034_60405724_60405856_60407973_60408069_60408286_60408365_60409213_60409311_60411577_60411739_60412451_60412586_60414829_60414964_60415248
ENSMUSG00000042680.9_21262795_21264443_1	chr18	-	342	2	ISM	ENSMUSG00000042680.9	ENST00000269209.7	3739	6	168753	1349	168737	-1251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCTCCTGGGCAGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	21264443	21262794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_21263083_21264389
ENSMUSG00000042680.9_21262844_21264531_1	chr18	-	381	2	ISM	ENSMUSG00000042680.9	ENST00000269209.7	3739	6	168665	1398	168649	-1300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGCACACCAAAGAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	21264531	21262843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_21263083_21264389
ENSMUSG00000042680.9_21262950_21280844_1	chr18	-	353	3	ISM	ENSMUSG00000042680.9	ENSMUST00000049260.7	4923	6	152351	2692	152336	-1406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTCTCATGGCCCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	21280844	21262949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_21263080_21264389_21264557_21280788
ENSMUSG00000042680.9_21263049_21280979_1	chr18	-	389	3	ISM	ENSMUSG00000042680.9	ENSMUST00000049260.7	4923	6	152216	2791	152201	-1505	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCCCTGTGTCCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	21280979	21263048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_21263080_21264389_21264557_21280788
ENSMUSG00000042680.9_21264464_21281062_1	chr18	-	367	2	ISM	ENSMUSG00000042680.9	ENSMUST00000234115.2	4932	5	152118	2920	152118	-2920	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAGCCAGTCCGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	21281062	21264463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_21264557_21280788
ENSMUSG00000042680.9_21281647_21301831_1	chr18	-	354	2	ISM	ENSMUSG00000042680.9	ENSMUST00000234115.2	4932	5	131349	20103	131349	-20103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAACATCGTGGAGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	21301831	21281646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_21281962_21301792
ENSMUSG00000042680.9_21281802_21369122_1	chr18	-	356	3	ISM	ENSMUSG00000042680.9	ENSMUST00000234115.2	4932	5	64058	20258	64058	-20258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCATCAGCAAGCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	21369122	21281801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_21281962_21301792_21301924_21369057
ENSMUSG00000042680.9_21281916_21432762_1	chr18	-	374	4	ISM	ENSMUSG00000042680.9	ENSMUST00000234115.2	4932	5	418	20372	418	-20372	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGCACCGGGGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	21432762	21281915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_21281962_21301792_21301924_21369057_21369199_21432706
ENSMUSG00000042680.9_21301872_21432875_1	chr18	-	362	3	ISM	ENSMUSG00000042680.9	ENSMUST00000234115.2	4932	5	305	40328	305	-40328	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAACAGCGTGGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	21432875	21301871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_21301924_21369057_21369199_21432706
ENSMUSG00000042680.9_21369152_21433012_1	chr18	-	353	2	ISM	ENSMUSG00000042680.9	ENSMUST00000234115.2	4932	5	168	107608	168	-107608	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGCCGGCAGTGGACGAC	NA	NA	NA	NA	NA	NA	NA	NA	21433012	21369151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_21369199_21432706
ENSMUSG00000042682.11_29690265_29697160_1	chr14	+	1219	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	0	459	0	-459	multi-exon	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCTGTGACAAAGACTAT	NA	NA	NA	NA	NA	NA	NA	NA	29690264	29697160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
ENSMUSG00000042682.11_29690385_29697160_1	chr14	+	1099	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	120	459	120	-459	multi-exon	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCTGTGACAAAGACTAT	NA	NA	NA	NA	NA	NA	NA	NA	29690384	29697160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
ENSMUSG00000042682.11_29690385_29697319_1	chr14	+	1258	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	120	300	120	-300	multi-exon	FALSE	canonical	NA	NA	NA	NA	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTACGTTGTACAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	29690384	29697319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
ENSMUSG00000042682.11_29691982_29697455_1	chr14	+	1286	4	ISM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	1717	164	1717	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTCCCAGGGACTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	29691981	29697455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_29692074_29693744_29693829_29695317_29695405_29696432
ENSMUSG00000042682.11_29693745_29697455_1	chr14	+	1194	3	ISM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	3480	164	3480	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTCCCAGGGACTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	29693744	29697455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_29693829_29695317_29695405_29696432
ENSMUSG00000042682.11_29695317_29697619_1	chr14	+	1275	2	ISM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	5052	0	5052	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTACATAAAATAGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	29695316	29697619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_29695405_29696432
ENSMUSG00000042684.9_153379038_153425539_1	chr1	-	1018	10	FSM	ENSMUSG00000042684.9	ENST00000367554.7	1022	10	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATCTTTATTTTAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	153425539	153379037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_153379304_153384857_153384898_153388291_153388377_153390985_153391033_153391147_153391297_153394628_153394722_153400092_153400156_153411613_153411706_153413173_153413248_153425430
ENSMUSG00000042684.9_153379245_153391009_1	chr1	-	123	3	ISM	ENSMUSG00000042684.9	ENST00000614468.1	892	9	22239	207	22239	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCCGGCTTCCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	153391009	153379244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153379304_153384857_153384898_153390985
ENSMUSG00000042684.9_153384856_153391180_1	chr1	-	122	3	ISM	ENSMUSG00000042684.9	ENST00000614468.1	892	9	22068	5818	22068	2	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGCCCTTGCTGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	153391180	153384855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153384898_153390985_153391033_153391147
ENSMUSG00000042684.9_153384858_153413248_1	chr1	-	579	7	FSM	ENSMUSG00000042684.9	ENST00000367552.6	579	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGCCCTTGCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	153413248	153384857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_153384898_153391147_153391297_153394628_153394722_153400092_153400169_153403810_153403869_153411617_153411706_153413173
ENSMUSG00000042684.9_153390986_153391247_1	chr1	-	147	2	ISM	ENSMUSG00000042684.9	ENST00000614468.1	892	9	22001	11948	22001	-6128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCTGACCTAATGATT	NA	NA	NA	NA	NA	NA	NA	NA	153391247	153390985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153391033_153391147
ENSMUSG00000042684.9_153391223_153394682_1	chr1	-	128	2	ISM	ENSMUSG00000042684.9	ENST00000367552.6	579	7	18566	6365	18566	-6365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTTGGATTTCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	153394682	153391222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153391297_153394628
ENSMUSG00000042688.17_75294049_75297552_1	chr9	-	2485	2	ISM	ENSMUSG00000042688.17	ENSMUST00000168937.8	4089	6	19089	-135	19089	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGGAAAGTTCCCACCG	NA	NA	NA	NA	NA	NA	NA	NA	75297552	75294048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_75296430_75297448
ENSMUSG00000042688.17_75294186_75300722_1	chr9	-	2522	3	ISM	ENSMUSG00000042688.17	ENSMUST00000168937.8	4089	6	15919	2	15919	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCACTGCTCAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	75300722	75294185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_75296430_75297448_75297651_75300646
ENSMUSG00000042688.17_75294389_75302905_1	chr9	-	2522	4	ISM	ENSMUSG00000042688.17	ENSMUST00000168937.8	4089	6	13736	205	13736	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTAATGGTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	75302905	75294388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791
ENSMUSG00000042688.17_75294962_75305376_1	chr9	-	2496	5	ISM	ENSMUSG00000042688.17	ENSMUST00000168937.8	4089	6	11265	778	11265	-776	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATGAAAAGATCTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	75305376	75294961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860
ENSMUSG00000042688.17_75295385_75305805_1	chr9	-	2502	5	ISM	ENSMUSG00000042688.17	ENSMUST00000168937.8	4089	6	10836	1201	10836	-1199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAAATCCCTCACAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	75305805	75295384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860
ENSMUSG00000042688.17_75295711_75317267_1	chr9	-	2541	6	FSM	ENSMUSG00000042688.17	ENST00000681888.1	4247	6	44	1662	3	-1525	multi-exon	FALSE	canonical	NA	NA	NA	NA	2581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGCGGGGAGGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	75317267	75295710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317130
ENSMUSG00000042688.17_75305246_75317267_1	chr9	-	897	2	ISM	ENSMUSG00000042688.17	ENST00000680777.1	4197	6	22	11197	3	-11060	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCAAACATGCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	75317267	75305245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_75306034_75317158
ENSMUSG00000042688.17_75305304_75317267_1	chr9	-	839	2	ISM	ENSMUSG00000042688.17	ENST00000680777.1	4197	6	22	11255	3	-11118	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACAATGACTGTGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	75317267	75305303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_75306034_75317158
ENSMUSG00000042694.18_47489102_47524743_1	chr19	-	1983	9	NIC	ENSMUSG00000042694.18	novel	2036	9	NA	NA	53	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGCCTTTGACGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	47524743	47489101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505628_47513125_47513195_47517075_47517172_47524634
ENSMUSG00000042694.18_47489102_47524743_2	chr19	-	1982	9	NNC	ENSMUSG00000042694.18	novel	2036	9	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGCCTTTGACGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	47524743	47489101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_47490157_47496244_47496318_47498773_47498891_47502243_47502422_47504530_47504654_47505465_47505628_47513125_47513195_47517075_47517172_47524634
ENSMUSG00000042694.18_47489102_47524743_3	chr19	-	1981	9	NNC	ENSMUSG00000042694.18	novel	2036	9	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGCCTTTGACGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	47524743	47489101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_47490157_47496244_47496318_47498773_47498891_47502245_47502422_47504529_47504654_47505465_47505628_47513125_47513195_47517075_47517172_47524634
ENSMUSG00000042694.18_47489102_47524796_1	chr19	-	2031	9	NNC	ENSMUSG00000042694.18	novel	2036	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGCCTTTGACGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	47524796	47489101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_47490157_47496244_47496318_47498773_47498891_47502243_47502422_47504529_47504649_47505465_47505628_47513125_47513195_47517075_47517172_47524634
ENSMUSG00000042694.18_47489102_47524796_2	chr19	-	2028	9	NNC	ENSMUSG00000042694.18	novel	2036	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGCCTTTGACGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	47524796	47489101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_47490157_47496244_47496318_47498773_47498891_47502243_47502414_47504529_47504654_47505465_47505628_47513125_47513195_47517075_47517172_47524634
ENSMUSG00000042694.18_47489102_47524796_3	chr19	-	2036	9	FSM	ENSMUSG00000042694.18	ENST00000224950.8	2036	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGCCTTTGACGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	47524796	47489101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_47490157_47496244_47496318_47498773_47498891_47502243_47502422_47504529_47504654_47505465_47505628_47513125_47513195_47517075_47517172_47524634
ENSMUSG00000042694.18_47496259_47517128_1	chr19	-	768	7	ISM	ENSMUSG00000042694.18	ENSMUST00000182808.8	1618	10	8347	615	7668	-615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAACCAAACCGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	47517128	47496258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075
ENSMUSG00000042694.18_47498807_47524701_1	chr19	-	786	7	ISM	ENSMUSG00000042694.18	ENSMUST00000182808.8	1618	10	774	3163	95	-3163	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAGACAGTGGCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	47524701	47498806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634
ENSMUSG00000042694.18_47498865_47524753_1	chr19	-	780	7	ISM	ENSMUSG00000042694.18	ENSMUST00000182808.8	1618	10	722	3221	43	-3221	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGCAGAGAGTGTTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	47524753	47498864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634
ENSMUSG00000042694.18_47502322_47525335_1	chr19	-	816	7	ISM	ENSMUSG00000042694.18	ENSMUST00000182808.8	1618	10	140	6678	140	-6678	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTAGAGACAGTGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	47525335	47502321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ENSMUSG00000042694.18_47504580_47525463_1	chr19	-	794	6	ISM	ENSMUSG00000042694.18	ENSMUST00000182808.8	1618	10	12	8936	12	-8936	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGACCAGCCCTTCCGTAA	NA	NA	NA	NA	NA	NA	NA	NA	47525463	47504579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ENSMUSG00000042699.12_153333359_153333821_1	chr1	-	142	2	ISM	ENSMUSG00000042699.12	ENST00000533748.1	1033	5	2316	73	2316	-73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATGAACATATGCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	153333821	153333358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153333478_153333798
ENSMUSG00000042699.12_153333409_153333880_1	chr1	-	151	2	ISM	ENSMUSG00000042699.12	ENST00000533748.1	1033	5	2257	123	2257	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGTTGAAGTGTCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	153333880	153333408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153333478_153333798
ENSMUSG00000042699.12_153333453_153333937_1	chr1	-	164	2	ISM	ENSMUSG00000042699.12	ENST00000533748.1	1033	5	2200	167	2200	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAGCATGCATCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	153333937	153333452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153333478_153333798
ENSMUSG00000042699.12_153334178_153338357_1	chr1	-	681	6	ISM	ENSMUSG00000042699.12	ENST00000436565.2	3103	24	21239	127	-2220	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTCTGCTGGCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	153338357	153334177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297
ENSMUSG00000042699.12_153335404_153340657_1	chr1	-	714	7	ISM	ENSMUSG00000042699.12	ENST00000436565.2	3103	24	18939	1353	-4520	-1353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAACGCCTGGGATAC	NA	NA	NA	NA	NA	NA	NA	NA	153340657	153335403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600
ENSMUSG00000042699.12_153336749_153341436_1	chr1	-	690	6	ISM	ENSMUSG00000042699.12	ENST00000436565.2	3103	24	18160	2698	4055	1549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAGAGCATACTCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	153341436	153336748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422
ENSMUSG00000042699.12_153336817_153341478_1	chr1	-	664	6	ISM	ENSMUSG00000042699.12	ENST00000436565.2	3103	24	18118	2766	4013	1481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCTAGGAGGAATTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	153341478	153336816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422
ENSMUSG00000042699.12_153336876_153341523_1	chr1	-	650	6	ISM	ENSMUSG00000042699.12	ENST00000436565.2	3103	24	18073	2825	3968	1422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACACCAGAGATGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	153341523	153336875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422
ENSMUSG00000042699.12_153338379_153342885_1	chr1	-	664	6	ISM	ENSMUSG00000042699.12	ENST00000436565.2	3103	24	16711	4328	2606	-81	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGAGCAGAGGAAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	153342885	153338378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777
ENSMUSG00000042699.12_153338385_153342934_1	chr1	-	707	6	ISM	ENSMUSG00000042699.12	ENST00000436565.2	3103	24	16662	4334	2557	-87	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACCTTGAGCAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	153342934	153338384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777
ENSMUSG00000042699.12_153340088_153344702_1	chr1	-	722	6	ISM	ENSMUSG00000042699.12	ENST00000436565.2	3103	24	14894	6037	789	-1790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAGTTCCCAAAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	153344702	153340087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619
ENSMUSG00000042699.12_153340376_153345418_1	chr1	-	711	6	ISM	ENSMUSG00000042699.12	ENST00000436565.2	3103	24	14178	6325	73	-2078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGTAACCAAGGTAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	153345418	153340375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345
ENSMUSG00000042699.12_153340662_153347408_1	chr1	-	679	6	ISM	ENSMUSG00000042699.12	ENST00000436565.2	3103	24	12188	6611	-1917	-2364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGGCTGGAACTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	153347408	153340661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365
ENSMUSG00000042699.12_153341446_153348036_1	chr1	-	717	6	ISM	ENSMUSG00000042699.12	ENSMUST00000186380.7	4561	28	15318	9942	-2545	-3148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGTGGTGAAGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	153348036	153341445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971
ENSMUSG00000042699.12_153344620_153348507_1	chr1	-	747	6	ISM	ENSMUSG00000042699.12	ENSMUST00000186380.7	4561	28	14847	13116	-3016	-6322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATCCTATGCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	153348507	153344619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417
ENSMUSG00000042699.12_153345368_153348933_1	chr1	-	683	6	ISM	ENSMUSG00000042699.12	ENSMUST00000186380.7	4561	28	14421	13864	-3442	-7070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATAATGTTTTGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	153348933	153345367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892
ENSMUSG00000042699.12_153347436_153353885_1	chr1	-	735	7	ISM	ENSMUSG00000042699.12	ENSMUST00000186380.7	4561	28	9469	15932	5711	-9138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACAGTACATTTTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	153353885	153347435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786
ENSMUSG00000042699.12_153347466_153353899_1	chr1	-	719	7	ISM	ENSMUSG00000042699.12	ENSMUST00000186380.7	4561	28	9455	15962	5697	-9168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTACTGGTTGTGGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	153353899	153347465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786
ENSMUSG00000042699.12_153347941_153354635_1	chr1	-	718	7	ISM	ENSMUSG00000042699.12	ENST00000436565.2	3103	24	4961	13890	4961	-9643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAGCTTAAATACATTGT	NA	NA	NA	NA	NA	NA	NA	NA	153354635	153347940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611
ENSMUSG00000042699.12_153348151_153356921_1	chr1	-	741	7	ISM	ENSMUSG00000042699.12	ENSMUST00000042141.12	4616	28	6485	16647	2675	-9853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTAAGTGCAATATGGG	NA	NA	NA	NA	NA	NA	NA	NA	153356921	153348150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877
ENSMUSG00000042699.12_153348245_153356947_1	chr1	-	673	7	ISM	ENSMUSG00000042699.12	ENSMUST00000042141.12	4616	28	6459	16741	2649	-9947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGACAAAATGCAGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	153356947	153348244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877
ENSMUSG00000042699.12_153348976_153359532_1	chr1	-	672	7	ISM	ENSMUSG00000042699.12	ENSMUST00000042141.12	4616	28	3874	17472	64	-10678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCTCACTTGTCCGACAG	NA	NA	NA	NA	NA	NA	NA	NA	153359532	153348975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485
ENSMUSG00000042705.10_47091945_47100850_1	chr18	+	297	4	ISM	ENSMUSG00000042705.10	ENSMUST00000234961.2	792	6	17	68024	0	-68024	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATGATTCATCTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	47091944	47100850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806
ENSMUSG00000042705.10_47100883_47220155_1	chr18	+	312	4	ISM	ENSMUSG00000042705.10	ENSMUST00000234701.2	528	6	8936	0	8936	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCCATCACATTCCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	47100882	47220155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_47100963_47123545_47123657_47219318_47219379_47220094
ENSMUSG00000042709.16_60291452_60307627_2	chr11	-	1563	8	FSM	ENSMUSG00000042709.16	ENSMUST00000108721.9	1813	8	250	0	250	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGGTCTAAGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	60307627	60291451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
ENSMUSG00000042709.16_60291464_60307844_3	chr11	-	1768	8	FSM	ENSMUSG00000042709.16	ENSMUST00000108721.9	1813	8	33	12	33	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	60307844	60291463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
ENSMUSG00000042709.16_60291664_60307877_1	chr11	-	1601	8	FSM	ENSMUSG00000042709.16	ENSMUST00000108721.9	1813	8	0	212	0	-200	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAAAAGTGAATCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	60307877	60291663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
ENSMUSG00000042712.11_135145828_135147333_2	chrX	+	464	3	FSM	ENSMUSG00000042712.11	ENSMUST00000048687.11	1019	3	0	555	0	-555	multi-exon	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGGAGCTAGATGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	135145827	135147333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_135145977_135146449_135146516_135147084
ENSMUSG00000042712.11_135145946_135147387_1	chrX	+	400	3	FSM	ENSMUSG00000042712.11	ENSMUST00000048687.11	1019	3	118	501	118	-501	multi-exon	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGGCTAACCGAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	135145945	135147387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_135145977_135146449_135146516_135147084
ENSMUSG00000042719.18_121546293_121577516_1	chr5	+	2591	21	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	10294	2956	10294	-2956	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGTTAGAGGAAACTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	121546292	121577516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397
ENSMUSG00000042719.18_121547186_121578005_1	chr5	+	2591	21	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	11187	2467	11187	-2467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAGGAATTCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	121547185	121578005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ENSMUSG00000042719.18_121547234_121578060_1	chr5	+	2598	21	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	11235	2412	11235	-2412	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCACCTTCCCCAGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	121547233	121578060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ENSMUSG00000042719.18_121556005_121578579_1	chr5	+	2694	16	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	20006	1893	20006	-1893	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGCTCAGTTTTGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	121556004	121578579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ENSMUSG00000042719.18_121559397_121578759_1	chr5	+	2586	14	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	23398	1713	23398	-1713	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGTGGAAAAGCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	121559396	121578759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ENSMUSG00000042719.18_121561644_121578886_1	chr5	+	2597	13	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	25645	1586	25645	-1586	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTTGGAAACAGATTTA	NA	NA	NA	NA	NA	NA	NA	NA	121561643	121578886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ENSMUSG00000042719.18_121561757_121579028_1	chr5	+	2626	13	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	25758	1444	25758	-1444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACACTTAAGAACTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	121561756	121579028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ENSMUSG00000042719.18_121564177_121579308_1	chr5	+	2624	11	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	28178	1164	28178	-1164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCATTGCATTCTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	121564176	121579308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ENSMUSG00000042719.18_121564864_121579414_1	chr5	+	2618	10	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	28865	1058	28865	-1058	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGCTGGAGCCTACATC	NA	NA	NA	NA	NA	NA	NA	NA	121564863	121579414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ENSMUSG00000042719.18_121569618_121579667_1	chr5	+	2598	8	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	33619	805	33619	-805	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATCAAGCTCTGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	121569617	121579667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ENSMUSG00000042719.18_121572983_121579779_1	chr5	+	2585	7	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	36984	693	36984	-693	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTAGGGCCTCCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	121572982	121579779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ENSMUSG00000042719.18_121573612_121580039_1	chr5	+	2606	6	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	37613	433	37613	-433	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCCCACGCCTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	121573611	121580039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ENSMUSG00000042719.18_121576830_121580291_1	chr5	+	2620	3	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	40831	181	40831	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTCCTCTGTAGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	121576829	121580291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121576902_121577397_121577545_121577890
ENSMUSG00000042726.15_121509898_121511420_1	chr5	-	859	3	ISM	ENSMUSG00000042726.15	ENSMUST00000120784.8	2425	12	12214	105	12214	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCCACTCCTACTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	121511420	121509897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121510476_121510665_121510739_121511212
ENSMUSG00000042726.15_121509959_121511537_1	chr5	-	915	3	ISM	ENSMUSG00000042726.15	ENSMUST00000120784.8	2425	12	12097	166	12097	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCCACCTCTCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	121511537	121509958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121510476_121510665_121510739_121511212
ENSMUSG00000042726.15_121510052_121511322_1	chr5	-	619	3	ISM	ENSMUSG00000042726.15	ENSMUST00000042312.14	2503	12	12373	264	12312	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGGGACCTAAGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	121511322	121510051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121510476_121510665_121510739_121511200
ENSMUSG00000042726.15_121510355_121512074_1	chr5	-	596	4	ISM	ENSMUSG00000042726.15	ENSMUST00000042312.14	2503	12	11621	567	11560	-562	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTCCAGCTGCCTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	121512074	121510354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121510476_121510665_121510739_121511200_121511538_121512009
ENSMUSG00000042726.15_121510410_121512125_1	chr5	-	592	4	ISM	ENSMUSG00000042726.15	ENSMUST00000042312.14	2503	12	11570	622	11509	-617	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCTTGCAGCCCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	121512125	121510409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121510476_121510665_121510739_121511200_121511538_121512009
ENSMUSG00000042726.15_121510696_121513181_1	chr5	-	604	4	ISM	ENSMUSG00000042726.15	ENSMUST00000042312.14	2503	12	10514	908	10453	-903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGGCTACCACAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	121513181	121510695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121510739_121511200_121511538_121512009_121512131_121513078
ENSMUSG00000042726.15_121511243_121515915_1	chr5	-	839	5	ISM	ENSMUSG00000042726.15	ENSMUST00000120784.8	2425	12	7719	1450	7719	-1450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTTTTCCTCATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	121515915	121511242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800
ENSMUSG00000042726.15_121511476_121516744_1	chr5	-	884	6	ISM	ENSMUSG00000042726.15	ENSMUST00000120784.8	2425	12	6890	1683	6890	-1683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGATGTCTCCTAACAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	121516744	121511475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558
ENSMUSG00000042726.15_121515799_121517532_1	chr5	-	669	3	ISM	ENSMUSG00000042726.15	ENSMUST00000120784.8	2425	12	6102	6006	6102	-6006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTGCTTCTTTTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	121517532	121515798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121516008_121516558_121516965_121517478
ENSMUSG00000042726.15_121515969_121517744_1	chr5	-	635	4	ISM	ENSMUSG00000042726.15	ENSMUST00000120784.8	2425	12	5890	6176	5890	-6176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCCCAAAGGACAGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	121517744	121515968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121516008_121516558_121516965_121517478_121517533_121517608
ENSMUSG00000042729.12_8713209_8717252_1	chr19	+	842	9	ISM	ENSMUSG00000042729.12	ENST00000311713.11	1124	10	3	716	3	-716	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTAGCCTCATGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	8713208	8717252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182
ENSMUSG00000042729.12_8713427_8717811_1	chr19	+	827	9	ISM	ENSMUSG00000042729.12	ENST00000311713.11	1124	10	221	157	221	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAGAGACAGATGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	8713426	8717811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717765
ENSMUSG00000042729.12_8713550_8717982_1	chr19	+	957	8	ISM	ENSMUSG00000042729.12	ENST00000311713.11	1124	10	344	-14	344	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	895	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGATCCTGGACCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	8713549	8717982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717765
ENSMUSG00000042729.12_8715036_8717792_1	chr19	+	694	8	ISM	ENSMUSG00000042729.12	ENSMUST00000049424.11	1204	11	1833	196	1830	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAGTACCCTCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	8715035	8717792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
ENSMUSG00000042729.12_8715286_8717982_1	chr19	+	752	7	ISM	ENSMUSG00000042729.12	ENSMUST00000049424.11	1204	11	2083	6	2080	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGATCCTGGACCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	8715285	8717982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
ENSMUSG00000042729.12_8715340_8717982_1	chr19	+	698	7	ISM	ENSMUSG00000042729.12	ENSMUST00000049424.11	1204	11	2137	6	2134	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGATCCTGGACCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	8715339	8717982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
ENSMUSG00000042744.17_121392334_121433531_1	chr5	+	2255	17	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	33754	73128	33754	-73109	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAGTGACATACCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	121392333	121433531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121392442_121396761_121396852_121397867_121397999_121400561_121400671_121401947_121402087_121404297_121404469_121411669_121411863_121415737_121415897_121419118_121419233_121419866_121420008_121424292_121424526_121424782_121424929_121427629_121427701_121429257_121429364_121430111_121430233_121430792_121430922_121433437
ENSMUSG00000042744.17_121401987_121437683_1	chr5	+	2240	16	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	43407	68976	43407	-68957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCACAGTACGACTATGAC	NA	NA	NA	NA	NA	NA	NA	NA	121401986	121437683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121402087_121404297_121404469_121411669_121411863_121415737_121415897_121419118_121419233_121419866_121420008_121424292_121424526_121424782_121424929_121427629_121427701_121429257_121429364_121430111_121430233_121430792_121430922_121433437_121433563_121435165_121435320_121436121_121436223_121437507
ENSMUSG00000042744.17_121419913_121443832_1	chr5	+	2231	16	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	61333	62827	61333	-62808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATCAGGAAGAACATGCT	NA	NA	NA	NA	NA	NA	NA	NA	121419912	121443832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121420008_121424292_121424526_121424782_121424929_121427629_121427701_121429257_121429364_121430111_121430233_121430792_121430922_121433437_121433563_121435165_121435320_121436121_121436223_121437507_121437707_121439831_121439952_121440669_121440805_121441594_121441759_121442280_121442515_121443734
ENSMUSG00000042744.17_121430144_121446666_1	chr5	+	2260	16	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	71564	59993	71564	-59974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTCATTGGCACCAACC	NA	NA	NA	NA	NA	NA	NA	NA	121430143	121446666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121430233_121430792_121430922_121433437_121433563_121435165_121435320_121436121_121436223_121437507_121437707_121439831_121439952_121440669_121440805_121441594_121441759_121442280_121442515_121443734_121443928_121444063_121444169_121445004_121445094_121445409_121445586_121446312_121446449_121446555
ENSMUSG00000042744.17_121430841_121446893_1	chr5	+	2255	16	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	72261	59766	72261	-59747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCGAGTTGGGGGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	121430840	121446893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121430922_121433437_121433563_121435165_121435320_121436121_121436223_121437507_121437707_121439831_121439952_121440669_121440805_121441594_121441759_121442280_121442515_121443734_121443928_121444063_121444169_121445004_121445094_121445409_121445586_121446312_121446449_121446555_121446698_121446792
ENSMUSG00000042744.17_121437533_121452077_1	chr5	+	2308	15	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	78953	54582	78953	-54563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACCTCTCCAGGTACGGA	NA	NA	NA	NA	NA	NA	NA	NA	121437532	121452077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121437707_121439831_121439952_121440669_121440805_121441594_121441759_121442280_121442515_121443734_121443928_121444063_121444169_121445004_121445094_121445409_121445586_121446312_121446449_121446555_121446698_121446792_121446960_121448603_121448751_121449685_121449871_121451936
ENSMUSG00000042744.17_121441606_121453449_1	chr5	+	2232	14	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	83026	53210	83026	-53191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCTTAAAAGGAGATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	121441605	121453449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121441759_121442280_121442515_121443734_121443928_121444063_121444169_121445004_121445094_121445409_121445586_121446312_121446449_121446555_121446698_121446792_121446960_121448603_121448751_121449685_121449871_121451936_121452091_121452930_121453212_121453379
ENSMUSG00000042744.17_121441664_121453512_1	chr5	+	2237	14	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	83084	53147	83084	-53128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATCCACAAGCGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	121441663	121453512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121441759_121442280_121442515_121443734_121443928_121444063_121444169_121445004_121445094_121445409_121445586_121446312_121446449_121446555_121446698_121446792_121446960_121448603_121448751_121449685_121449871_121451936_121452091_121452930_121453212_121453379
ENSMUSG00000042744.17_121446312_121460842_1	chr5	+	2316	14	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	87732	45817	87732	-45798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTTCTGGCTGAAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	121446311	121460842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121446449_121446555_121446698_121446792_121446960_121448603_121448751_121449685_121449871_121451936_121452091_121452930_121453212_121453379_121453570_121455264_121455347_121456625_121456829_121458027_121458164_121459460_121459644_121460254_121460420_121460698
ENSMUSG00000042744.17_121446604_121462064_1	chr5	+	2241	14	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	88024	44595	88024	-44576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAACCTCGTAGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	121446603	121462064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121446698_121446792_121446960_121448603_121448751_121449685_121449871_121451936_121452091_121452930_121453212_121453379_121453570_121455264_121455347_121456625_121456829_121458027_121458164_121459460_121459644_121460254_121460420_121460698_121460869_121461980
ENSMUSG00000042744.17_121456737_121474733_1	chr5	+	2242	16	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	98157	31926	98157	-31907	internal_fragment	TRUE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCGAGGGATGCTAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	121456736	121474733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121456829_121458027_121458164_121459460_121459644_121460254_121460420_121460698_121460869_121461980_121462097_121463253_121463358_121466147_121466310_121466425_121466575_121467127_121467208_121467520_121467685_121469738_121469977_121470984_121471122_121471485_121471613_121472399_121472538_121474652
ENSMUSG00000042744.17_121459519_121480028_1	chr5	+	2266	16	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	100939	26631	100939	-26612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTCTTCCACATCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	121459518	121480028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121459644_121460254_121460420_121460698_121460869_121461980_121462097_121463253_121463358_121466147_121466310_121466425_121466575_121467127_121467208_121467520_121467685_121469738_121469977_121470984_121471122_121471485_121471613_121472399_121472538_121474652_121474790_121477487_121477649_121479935
ENSMUSG00000042744.17_121460312_121480783_1	chr5	+	2244	16	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	101732	25876	101732	-25857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCACCGACCTCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	121460311	121480783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121460420_121460698_121460869_121461980_121462097_121463253_121463358_121466147_121466310_121466425_121466575_121467127_121467208_121467520_121467685_121469738_121469977_121470984_121471122_121471485_121471613_121472399_121472538_121474652_121474790_121477487_121477649_121479935_121480118_121480712
ENSMUSG00000042744.17_121469816_121486960_1	chr5	+	2245	12	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	111236	19699	111236	-19680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGGGAGAAGGCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	121469815	121486960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121469977_121470984_121471122_121471485_121471613_121472399_121472538_121474652_121474790_121477487_121477649_121479935_121480118_121480712_121480919_121481155_121481287_121481541_121481748_121482745_121482926_121486481
ENSMUSG00000042744.17_121469872_121487033_1	chr5	+	2262	12	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	111292	19626	111292	-19607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGGGGGAAGCAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	121469871	121487033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121469977_121470984_121471122_121471485_121471613_121472399_121472538_121474652_121474790_121477487_121477649_121479935_121480118_121480712_121480919_121481155_121481287_121481541_121481748_121482745_121482926_121486481
ENSMUSG00000042744.17_121471018_121487150_1	chr5	+	2241	11	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	112438	19509	112438	-19490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGCTGATGCCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	121471017	121487150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121471122_121471485_121471613_121472399_121472538_121474652_121474790_121477487_121477649_121479935_121480118_121480712_121480919_121481155_121481287_121481541_121481748_121482745_121482926_121486481
ENSMUSG00000042744.17_121472456_121487422_1	chr5	+	2226	9	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	113876	19237	113876	-19218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACGTCGAGCAGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	121472455	121487422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121472538_121474652_121474790_121477487_121477649_121479935_121480118_121480712_121480919_121481155_121481287_121481541_121481748_121482745_121482926_121486481
ENSMUSG00000042744.17_121472494_121487486_1	chr5	+	2252	9	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	113914	19173	113914	-19154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTCTGCAGTTCACAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	121472493	121487486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121472538_121474652_121474790_121477487_121477649_121479935_121480118_121480712_121480919_121481155_121481287_121481541_121481748_121482745_121482926_121486481
ENSMUSG00000042744.17_121480035_121488611_1	chr5	+	2232	7	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	121455	18048	121455	-18029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACAGTGTCAGTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	121480034	121488611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121480118_121480712_121480919_121481155_121481287_121481541_121481748_121482745_121482926_121486481_121487789_121488492
ENSMUSG00000042744.17_121480835_121491677_1	chr5	+	2240	7	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	122255	14982	122255	-14963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAGCAGATCAACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	121480834	121491677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121480919_121481155_121481287_121481541_121481748_121482745_121482926_121486481_121487789_121488492_121488701_121491553
ENSMUSG00000042744.17_121486784_121498243_1	chr5	+	2234	9	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	128204	8416	128204	-8397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGCACCTGAGATCACCT	NA	NA	NA	NA	NA	NA	NA	NA	121486783	121498243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121487789_121488492_121488701_121491553_121491778_121491876_121492029_121493625_121493733_121494265_121494390_121496206_121496398_121497359_121497507_121498167
ENSMUSG00000042744.17_121486926_121498824_1	chr5	+	2266	10	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	128346	7835	128346	-7816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGGGGAGGAGGTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	121486925	121498824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121487789_121488492_121488701_121491553_121491778_121491876_121492029_121493625_121493733_121494265_121494390_121496206_121496398_121497359_121497507_121498167_121498288_121498694
ENSMUSG00000042744.17_121487191_121500885_1	chr5	+	2236	12	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	128611	5774	128611	-5755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGACCTGCTGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	121487190	121500885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121487789_121488492_121488701_121491553_121491778_121491876_121492029_121493625_121493733_121494265_121494390_121496206_121496398_121497359_121497507_121498167_121498288_121498694_121498851_121500503_121500608_121500780
ENSMUSG00000042744.17_121487244_121500955_1	chr5	+	2253	12	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	128664	5704	128664	-5685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGCAGACATCCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	121487243	121500955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121487789_121488492_121488701_121491553_121491778_121491876_121492029_121493625_121493733_121494265_121494390_121496206_121496398_121497359_121497507_121498167_121498288_121498694_121498851_121500503_121500608_121500780
ENSMUSG00000042744.17_121487412_121501926_1	chr5	+	2253	13	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	128832	4733	128832	-4714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGTGGAGCTATGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	121487411	121501926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121487789_121488492_121488701_121491553_121491778_121491876_121492029_121493625_121493733_121494265_121494390_121496206_121496398_121497359_121497507_121498167_121498288_121498694_121498851_121500503_121500608_121500780_121501003_121501805
ENSMUSG00000042744.17_121498200_121505649_1	chr5	+	2271	8	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	139620	1010	139620	-991	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGCAGAGACTGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	121498199	121505649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121498288_121498694_121498851_121500503_121500608_121500780_121501003_121501805_121501970_121502598_121502795_121502929_121503153_121504531
ENSMUSG00000042744.17_121498776_121505804_1	chr5	+	2257	7	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	140196	855	140196	-836	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACATGCCAACTGTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	121498775	121505804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121498851_121500503_121500608_121500780_121501003_121501805_121501970_121502598_121502795_121502929_121503153_121504531
ENSMUSG00000042744.17_121500905_121506082_1	chr5	+	2232	5	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	142325	577	142325	-558	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTGTGCCAGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	121500904	121506082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121501003_121501805_121501970_121502598_121502795_121502929_121503153_121504531
ENSMUSG00000042744.17_121502979_121506640_1	chr5	+	2283	2	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	144399	19	144399	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGGTCACCTCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	121502978	121506640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121503153_121504531
ENSMUSG00000042744.17_121503031_121506651_1	chr5	+	2242	2	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	144451	8	144451	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTCTGACTGACTGACC	NA	NA	NA	NA	NA	NA	NA	NA	121503030	121506651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121503153_121504531
ENSMUSG00000042747.13_89153273_89156447_1	chr3	+	836	4	ISM	ENSMUSG00000042747.13	ENSMUST00000040888.12	1172	5	0	766	0	-569	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGTATCTGACAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	89153272	89156447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89153823_89154084_89154240_89154371_89154436_89156380
ENSMUSG00000042747.13_89153549_89157030_1	chr3	+	713	5	FSM	ENSMUSG00000042747.13	ENSMUST00000040888.12	1172	5	276	183	-192	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTGTGAACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	89153548	89157030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89153823_89154084_89154240_89154371_89154436_89156380_89156448_89156877
ENSMUSG00000042747.13_89153741_89154108_1	chr3	+	181	2	ISM	ENSMUSG00000042747.13	ENSMUST00000168900.3	582	5	0	2908	0	-2908	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTCCTCCCTCCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	89153740	89154108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89153901_89154087
ENSMUSG00000042747.13_89153741_89157214_1	chr3	+	705	5	FSM	ENSMUSG00000042747.13	ENSMUST00000040888.12	1172	5	468	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTAACTGGTGTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	89153740	89157214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89153823_89154084_89154240_89154371_89154436_89156380_89156448_89156877
ENSMUSG00000042747.13_89153856_89154215_1	chr3	+	173	2	ISM	ENSMUSG00000042747.13	ENSMUST00000168900.3	582	5	115	2801	115	-2801	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTTTCGTCTTCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	89153855	89154215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89153901_89154087
ENSMUSG00000042747.13_89154084_89157030_1	chr3	+	353	2	FSM	ENSMUSG00000042747.13	ENST00000482246.5	346	2	-6	-1	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTGTGAACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	89154083	89157030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89154240_89156833
ENSMUSG00000042757.17_103361423_103366542_1	chr9	-	715	2	ISM	ENSMUSG00000042757.17	ENST00000508711.5	2073	3	120455	1270	120455	212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCACCACAGTGGAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	103366542	103361422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_103361983_103366387
ENSMUSG00000042766.18_89141484_89153264_1	chr3	-	2912	9	NNC	ENSMUSG00000042766.18	novel	2926	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTTCCTGGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	89153264	89141483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_89142600_89143609_89143908_89144923_89145219_89146204_89146327_89146577_89146832_89149473_89149570_89149681_89149826_89150890_89151235_89153021
ENSMUSG00000042766.18_89141484_89153264_2	chr3	-	2915	9	NNC	ENSMUSG00000042766.18	novel	2926	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTTCCTGGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	89153264	89141483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_89142600_89143609_89143908_89144923_89145227_89146204_89146327_89146577_89146827_89149473_89149570_89149681_89149826_89150890_89151235_89153021
ENSMUSG00000042766.18_89141484_89153264_3	chr3	-	2914	9	NNC	ENSMUSG00000042766.18	novel	2926	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTTCCTGGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	89153264	89141483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_89142600_89143609_89143908_89144923_89145227_89146204_89146327_89146577_89146832_89149473_89149564_89149681_89149826_89150890_89151235_89153021
ENSMUSG00000042766.18_89141484_89153264_4	chr3	-	2920	9	FSM	ENSMUSG00000042766.18	ENST00000545012.5	2926	9	0	6	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTTCCTGGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	89153264	89141483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89142600_89143609_89143908_89144923_89145227_89146204_89146327_89146577_89146832_89149473_89149570_89149681_89149826_89150890_89151235_89153021
ENSMUSG00000042766.18_89151026_89151627_1	chr3	-	380	2	ISM	ENSMUSG00000042766.18	ENST00000543729.5	1703	9	1533	6103	693	-6103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTAGAGGCCACCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	89151627	89151025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89151235_89151456
ENSMUSG00000042772.16_152714621_152730131_1	chr1	-	2797	13	ISM	ENSMUSG00000042772.16	ENST00000508461.5	3962	22	48272	-78	23788	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTTTGCTGACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	152730131	152714620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060
ENSMUSG00000042772.16_152714760_152731639_1	chr1	-	2698	14	ISM	ENSMUSG00000042772.16	ENST00000508461.5	3962	22	46764	61	22280	-61	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCCTCTCACCTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	152731639	152714759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599
ENSMUSG00000042772.16_152714911_152732244_1	chr1	-	2706	15	ISM	ENSMUSG00000042772.16	ENST00000508461.5	3962	22	46159	212	21675	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGAGAGGGTGTAAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	152732244	152714910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199
ENSMUSG00000042772.16_152714969_152732291_1	chr1	-	2695	15	ISM	ENSMUSG00000042772.16	ENST00000508461.5	3962	22	46112	270	21628	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGGACTGACCCACACA	NA	NA	NA	NA	NA	NA	NA	NA	152732291	152714968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199
ENSMUSG00000042772.16_152715092_152734680_1	chr1	-	2694	16	ISM	ENSMUSG00000042772.16	ENST00000508461.5	3962	22	43723	393	19239	-393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGTTGTTAATGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	152734680	152715091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629
ENSMUSG00000042772.16_152715882_152735166_1	chr1	-	2702	16	ISM	ENSMUSG00000042772.16	ENST00000508461.5	3962	22	43237	1183	18753	-1183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTTGGCATCAGGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	152735166	152715881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102
ENSMUSG00000042772.16_152716137_152736241_1	chr1	-	2696	16	ISM	ENSMUSG00000042772.16	ENST00000508461.5	3962	22	42162	1438	17678	-1438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTCTCTAATTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	152736241	152716136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200
ENSMUSG00000042772.16_152716776_152737512_1	chr1	-	2721	16	ISM	ENSMUSG00000042772.16	ENST00000508461.5	3962	22	40891	2077	16407	-2077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCAACTCTAATACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	152737512	152716775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431
ENSMUSG00000042772.16_152717282_152742404_1	chr1	-	2707	16	ISM	ENSMUSG00000042772.16	ENST00000508461.5	3962	22	35999	2583	11515	-2583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCTCTGTCAATCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	152742404	152717281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331
ENSMUSG00000042772.16_152719094_152744121_1	chr1	-	2710	16	ISM	ENSMUSG00000042772.16	ENST00000508461.5	3962	22	34282	4395	9798	-4395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGAGTCTGGCTGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	152744121	152719093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002
ENSMUSG00000042772.16_152719786_152778373_1	chr1	-	2787	16	ISM	ENSMUSG00000042772.16	ENST00000508461.5	3962	22	30	5087	0	-5087	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTTTCCCATCAC	NA	NA	NA	NA	NA	NA	NA	NA	152778373	152719785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152778259
ENSMUSG00000042790.17_45774807_45811159_1	chr9	-	2929	12	ISM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	7016	0	6480	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTTGCCTTATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	45811159	45774806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043
ENSMUSG00000042790.17_45774989_45811279_1	chr9	-	2867	12	ISM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	6896	182	6360	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAATGCATCTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	45811279	45774988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043
ENSMUSG00000042790.17_45775124_45811455_1	chr9	-	2908	12	ISM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	6720	317	6184	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTCTTCTGGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	45811455	45775123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043
ENSMUSG00000042790.17_45775394_45817726_1	chr9	-	2928	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	449	587	-21	331	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAAAGGTTAAGGCAATT	NA	NA	NA	NA	NA	NA	NA	NA	45817726	45775393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ENSMUSG00000042790.17_45775466_45817801_1	chr9	-	2931	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	374	659	-96	259	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGACCAGCCAGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	45817801	45775465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ENSMUSG00000042790.17_45775588_45817840_1	chr9	-	2848	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	335	781	-135	137	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTCCATTTCTCCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	45817840	45775587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ENSMUSG00000042790.17_45775725_45811154_1	chr9	-	2111	13	ISM	ENSMUSG00000042790.17	ENST00000531452.5	2667	15	6485	0	6485	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACAAATGTAACTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	45811154	45775724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043
ENSMUSG00000042790.17_45775793_45811258_1	chr9	-	2141	13	NNC	ENSMUSG00000042790.17	novel	2667	15	NA	NA	6381	-68	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCCTCCAAGCCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	45811258	45775792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780570_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043
ENSMUSG00000042790.17_45776011_45811423_1	chr9	-	2094	13	ISM	ENSMUSG00000042790.17	ENST00000531452.5	2667	15	6216	286	6216	121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGGGATGCAGACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	45811423	45776010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043
ENSMUSG00000042790.17_45776132_45816120_1	chr9	-	2121	14	ISM	ENSMUSG00000042790.17	ENST00000531452.5	2667	15	1519	407	1519	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGCCGTGTACATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	45816120	45776131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103
ENSMUSG00000042790.17_45776132_45816169_1	chr9	-	2170	14	ISM	ENSMUSG00000042790.17	ENST00000531452.5	2667	15	1470	407	1470	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGCCGTGTACATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	45816169	45776131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103
ENSMUSG00000042790.17_45776278_45816219_1	chr9	-	2074	14	ISM	ENSMUSG00000042790.17	ENST00000531452.5	2667	15	1420	553	1420	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACCAACACAAATGACACT	NA	NA	NA	NA	NA	NA	NA	NA	45816219	45776277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103
ENSMUSG00000042807.16_53850985_53866057_1	chr1	-	1531	2	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	213632	647	213632	-647	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGATGTATAATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	53866057	53850984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53852493_53866034
ENSMUSG00000042807.16_53851052_53866101_1	chr1	-	1508	2	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	213588	714	213588	-714	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTCTCACATCAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	53866101	53851051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53852493_53866034
ENSMUSG00000042807.16_53851108_53866149_1	chr1	-	1500	2	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	213540	770	213540	-770	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGGGAGCCATCAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	53866149	53851107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53852493_53866034
ENSMUSG00000042807.16_53851339_53870724_1	chr1	-	1524	5	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	208965	1001	208965	-1001	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAAATCAGACTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	53870724	53851338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53852493_53866034_53866148_53867043_53867130_53869800_53869916_53870668
ENSMUSG00000042807.16_53851469_53871827_1	chr1	-	1532	6	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	207862	1131	207862	-1131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCCTTTTATTCTTATA	NA	NA	NA	NA	NA	NA	NA	NA	53871827	53851468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53852493_53866034_53866148_53867043_53867130_53869800_53869916_53870668_53870816_53871780
ENSMUSG00000042807.16_53851704_53879940_1	chr1	-	1547	8	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	199749	1366	199749	-1366	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTATAATGCATGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	53879940	53851703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53852493_53866034_53866148_53867043_53867130_53869800_53869916_53870668_53870816_53871780_53871911_53878170_53878270_53879872
ENSMUSG00000042807.16_53851967_53892346_1	chr1	-	1502	10	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	187343	1629	187343	-1629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATTAAAAAAATATATATT	NA	NA	NA	NA	NA	NA	NA	NA	53892346	53851966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53852493_53866034_53866148_53867043_53867130_53869800_53869916_53870668_53870816_53871780_53871911_53878170_53878270_53879872_53880026_53890731_53890846_53892327
ENSMUSG00000042807.16_53852136_53904255_1	chr1	-	1491	11	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	175434	1798	175434	-1798	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCCCATTTGGTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	53904255	53852135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53852493_53866034_53866148_53867043_53867130_53869800_53869916_53870668_53870816_53871780_53871911_53878170_53878270_53879872_53880026_53890731_53890846_53892327_53892449_53904199
ENSMUSG00000042807.16_53852354_53926762_1	chr1	-	1529	14	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	152927	2016	152927	-2016	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCAGGCGGTTCTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	53926762	53852353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53852493_53866034_53866148_53867043_53867130_53869800_53869916_53870668_53870816_53871780_53871911_53878170_53878270_53879872_53880026_53890731_53890846_53892327_53892449_53904199_53904310_53907994_53908079_53924487_53924585_53926741
ENSMUSG00000042807.16_53852414_53926810_1	chr1	-	1517	14	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	152879	2076	152879	-2076	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAAGAGACCAGTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	53926810	53852413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53852493_53866034_53866148_53867043_53867130_53869800_53869916_53870668_53870816_53871780_53871911_53878170_53878270_53879872_53880026_53890731_53890846_53892327_53892449_53904199_53904310_53907994_53908079_53924487_53924585_53926741
ENSMUSG00000042807.16_53866035_53930419_1	chr1	-	1607	14	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	149270	15697	149270	-15697	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAGAAAGTACTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	53930419	53866034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53866148_53867043_53867130_53869800_53869916_53870668_53870816_53871780_53871911_53878170_53878270_53879872_53880026_53890731_53890846_53892327_53892449_53904199_53904310_53907994_53908079_53924487_53924585_53926741_53926845_53930284
ENSMUSG00000042807.16_53869800_53943593_1	chr1	-	1595	13	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	136096	19462	136096	-19462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTTTGGCTTATGAATG	NA	NA	NA	NA	NA	NA	NA	NA	53943593	53869799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53869916_53870668_53870816_53871780_53871911_53878170_53878270_53879872_53880026_53890731_53890846_53892327_53892449_53904199_53904310_53907994_53908079_53924487_53924585_53926741_53926845_53930284_53930420_53943407
ENSMUSG00000042807.16_53871851_53953681_1	chr1	-	1532	14	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	126008	21513	126008	-21513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAAGACAATGACATCC	NA	NA	NA	NA	NA	NA	NA	NA	53953681	53871850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53871911_53878170_53878270_53879872_53880026_53890731_53890846_53892327_53892449_53904199_53904310_53907994_53908079_53924487_53924585_53926741_53926845_53930284_53930420_53943407_53943594_53952399_53952525_53952925_53953030_53953640
ENSMUSG00000042807.16_53878176_53953791_1	chr1	-	1577	13	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	125898	27838	125898	-27838	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTAAGAGTGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	53953791	53878175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53878270_53879872_53880026_53890731_53890846_53892327_53892449_53904199_53904310_53907994_53908079_53924487_53924585_53926741_53926845_53930284_53930420_53943407_53943594_53952399_53952525_53952925_53953030_53953640
ENSMUSG00000042807.16_53879871_53963153_1	chr1	-	1581	13	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	116536	29533	116536	-29533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGTTTCTTTCTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	53963153	53879870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53880026_53890731_53890846_53892327_53892449_53904199_53904310_53907994_53908079_53924487_53924585_53926741_53926845_53930284_53930420_53943407_53943594_53952399_53952525_53952925_53953030_53953640_53953792_53963057
ENSMUSG00000042807.16_53879983_53964517_1	chr1	-	1518	14	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	115172	29645	115172	-29645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGAGAGCTCTTTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	53964517	53879982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53880026_53890731_53890846_53892327_53892449_53904199_53904310_53907994_53908079_53924487_53924585_53926741_53926845_53930284_53930420_53943407_53943594_53952399_53952525_53952925_53953030_53953640_53953792_53963057_53963154_53964468
ENSMUSG00000042807.16_53890822_53964655_1	chr1	-	1523	13	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	115034	40484	115034	-40484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAAGATGCTTTCAATC	NA	NA	NA	NA	NA	NA	NA	NA	53964655	53890821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53890846_53892327_53892449_53904199_53904310_53907994_53908079_53924487_53924585_53926741_53926845_53930284_53930420_53943407_53943594_53952399_53952525_53952925_53953030_53953640_53953792_53963057_53963154_53964468
ENSMUSG00000042807.16_53892422_53964761_1	chr1	-	1511	12	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	114928	42084	114928	-42084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCCCTTACAAGAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	53964761	53892421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53892449_53904199_53904310_53907994_53908079_53924487_53924585_53926741_53926845_53930284_53930420_53943407_53943594_53952399_53952525_53952925_53953030_53953640_53953792_53963057_53963154_53964468
ENSMUSG00000042807.16_53904291_53964894_1	chr1	-	1526	11	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	114795	53953	114795	-53953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCATATGTGCCTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	53964894	53904290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53904310_53907994_53908079_53924487_53924585_53926741_53926845_53930284_53930420_53943407_53943594_53952399_53952525_53952925_53953030_53953640_53953792_53963057_53963154_53964468
ENSMUSG00000042807.16_53924556_53965093_1	chr1	-	1554	9	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	114596	74218	114596	45416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCAACCCAACATCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	53965093	53924555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53924585_53926741_53926845_53930284_53930420_53943407_53943594_53952399_53952525_53952925_53953030_53953640_53953792_53963057_53963154_53964468
ENSMUSG00000042807.16_53943407_53965283_1	chr1	-	1478	6	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	114406	93069	114406	26565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCTGAGCAAGCCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	53965283	53943406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53943594_53952399_53952525_53952925_53953030_53953640_53953792_53963057_53963154_53964468
ENSMUSG00000042807.16_53943498_53965440_1	chr1	-	1544	6	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	114249	93160	114249	26474	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACCTCGTGGGATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	53965440	53943497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53943594_53952399_53952525_53952925_53953030_53953640_53953792_53963057_53963154_53964468
ENSMUSG00000042807.16_53952428_53965557_1	chr1	-	1537	5	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	114132	102090	114132	17544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTCACCGTGCTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	53965557	53952427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53952525_53952925_53953030_53953640_53953792_53963057_53963154_53964468
ENSMUSG00000042807.16_53952490_53965601_1	chr1	-	1519	5	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	114088	102152	114088	17482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGATCCAGGCTCACGCT	NA	NA	NA	NA	NA	NA	NA	NA	53965601	53952489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53952525_53952925_53953030_53953640_53953792_53963057_53963154_53964468
ENSMUSG00000042807.16_53953012_53965727_1	chr1	-	1524	4	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	113962	102674	113962	16960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATGACTAATGAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	53965727	53953011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53953030_53953640_53953792_53963057_53963154_53964468
ENSMUSG00000042807.16_53963058_53966325_1	chr1	-	1590	3	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	113364	112720	113364	6914	internal_fragment	TRUE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCAGCTGTTAGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	53966325	53963057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53963154_53964468_53965861_53966223
ENSMUSG00000042807.16_53964496_53970178_1	chr1	-	1516	3	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	109511	114158	109511	5476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCAGGAGGAGGGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	53970178	53964495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53965861_53966223_53966325_53970128
ENSMUSG00000042807.16_53964698_53972379_1	chr1	-	1506	4	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	107310	114360	107310	5274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGGTGCCCAGCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	53972379	53964697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53965861_53966223_53966325_53970128_53970269_53972277
ENSMUSG00000042807.16_53964915_53990033_1	chr1	-	1589	7	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	89656	114577	89656	5057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGGAAGGCGCAGACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	53990033	53964914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53965861_53966223_53966325_53970128_53970269_53972277_53972448_53976216_53976293_53981864_53981960_53989972
ENSMUSG00000042807.16_53965015_53990058_1	chr1	-	1514	7	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	89631	114677	89631	4957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGAACCTTCCCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	53990058	53965014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53965861_53966223_53966325_53970128_53970269_53972277_53972448_53976216_53976293_53981864_53981960_53989972
ENSMUSG00000042807.16_53965129_54079445_1	chr1	-	1508	8	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	244	114791	244	4843	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTGTAGCTCTCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	54079445	53965128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53965861_53966223_53966325_53970128_53970269_53972277_53972448_53976216_53976293_53981864_53981960_53989972_53990081_54079359
ENSMUSG00000042807.16_53965176_54079522_1	chr1	-	1538	8	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	167	114838	167	4796	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCCAACCTGGAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	54079522	53965175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53965861_53966223_53966325_53970128_53970269_53972277_53972448_53976216_53976293_53981864_53981960_53989972_53990081_54079359
ENSMUSG00000042807.16_53965323_54079636_1	chr1	-	1505	8	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	53	114985	53	4649	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATCTCAGACCAAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	54079636	53965322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_53965861_53966223_53966325_53970128_53970269_53972277_53972448_53976216_53976293_53981864_53981960_53989972_53990081_54079359
ENSMUSG00000042810.15_48379883_48382219_1	chr6	+	384	4	ISM	ENSMUSG00000042810.15	ENSMUST00000114572.9	4323	18	7083	12181	68	-8220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGCCCTGCAAGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	48379882	48382219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48379945_48380311_48380432_48380924_48381075_48382167
ENSMUSG00000042810.15_48380400_48383264_1	chr6	+	369	4	ISM	ENSMUSG00000042810.15	ENSMUST00000031815.12	3685	16	7852	10574	585	-7175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGTGTAGGAGCCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	48380399	48383264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48380432_48380924_48381075_48382167_48382324_48383233
ENSMUSG00000042810.15_48380977_48383786_1	chr6	+	405	4	ISM	ENSMUSG00000042810.15	ENSMUST00000031815.12	3685	16	8429	10052	1162	-6653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTGCAAGGCCTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	48380976	48383786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48381075_48382167_48382324_48383233_48383366_48383767
ENSMUSG00000042810.15_48380977_48383805_1	chr6	+	424	4	ISM	ENSMUSG00000042810.15	ENSMUST00000031815.12	3685	16	8429	10033	1162	-6634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTTTGAAGGAGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	48380976	48383805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48381075_48382167_48382324_48383233_48383366_48383767
ENSMUSG00000042810.15_48382285_48384638_1	chr6	+	377	4	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	2470	5801	2470	-5801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGGGCCTGCTGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	48382284	48384638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48382324_48383233_48383366_48383767_48383942_48384606
ENSMUSG00000042810.15_48383341_48385490_1	chr6	+	377	4	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	3526	4949	3526	-4949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAGTCATGAAGCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	48383340	48385490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48383366_48383767_48383942_48384606_48384757_48385462
ENSMUSG00000042810.15_48384655_48386180_1	chr6	+	377	3	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	4840	4259	4840	-4259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTCACTAGCCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	48384654	48386180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48384757_48385462_48385661_48386103
ENSMUSG00000042810.15_48385498_48386696_1	chr6	+	382	3	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	5683	3743	5683	-3743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGAAGGACCTGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	48385497	48386696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48385661_48386103_48386278_48386651
ENSMUSG00000042810.15_48385546_48386751_1	chr6	+	389	3	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	5731	3688	5731	-3688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCAGCCAGCAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	48385545	48386751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48385661_48386103_48386278_48386651
ENSMUSG00000042810.15_48385606_48386793_1	chr6	+	371	3	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	5791	3646	5791	-3646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGGAGCAGCCAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	48385605	48386793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48385661_48386103_48386278_48386651
ENSMUSG00000042810.15_48386133_48388687_1	chr6	+	434	3	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	6318	1752	6318	-1752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAACAGAGCCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	48386132	48388687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48386278_48386651_48386829_48388575
ENSMUSG00000042810.15_48386718_48389316_1	chr6	+	373	3	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	6903	1123	6903	-1123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGTGACCACCAGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	48386717	48389316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48386829_48388575_48388729_48389207
ENSMUSG00000042810.15_48386793_48390040_1	chr6	+	371	4	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	6978	399	6978	-399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGAGAACTCTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	48386792	48390040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48386829_48388575_48388729_48389207_48389361_48390011
ENSMUSG00000042810.15_48388625_48390117_1	chr6	+	363	3	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	8810	322	8810	-322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCCCTTGCTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	48388624	48390117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48388729_48389207_48389361_48390011
ENSMUSG00000042810.15_48389342_48390437_1	chr6	+	355	3	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	9527	2	9527	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCTGGAGTCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	48389341	48390437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48389361_48390011_48390207_48390296
ENSMUSG00000042821.8_167380115_167380859_1	chr2	+	446	2	ISM	ENSMUSG00000042821.8	ENSMUST00000052631.8	1621	3	0	3875	0	-3875	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTCCCTGGAGGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	167380114	167380859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_167380292_167380590
ENSMUSG00000042821.8_167380260_167380999_1	chr2	+	441	2	ISM	ENSMUSG00000042821.8	ENSMUST00000052631.8	1621	3	145	3735	145	-3735	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGGCGCTCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	167380259	167380999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_167380292_167380590
ENSMUSG00000042821.8_167380862_167383959_1	chr2	+	398	2	ISM	ENSMUSG00000042821.8	ENSMUST00000052631.8	1621	3	747	775	747	-775	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACAAGCACCAAGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	167380861	167383959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_167381119_167383818
ENSMUSG00000042826.14_69688834_69693731_1	chr11	-	907	5	FSM	ENSMUSG00000042826.14	ENST00000575235.5	929	5	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAGATCCTGGGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	69693731	69688833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69689099_69689389_69689589_69690177_69690282_69690491_69690603_69693503
ENSMUSG00000042831.14_30008915_30013615_1	chr7	+	702	6	NNC	ENSMUSG00000042831.14	novel	703	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1548	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAGACCTTGGAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	30008914	30013615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30012053_30012133_30013344
ENSMUSG00000042831.14_30008915_30013615_2	chr7	+	703	6	FSM	ENSMUSG00000042831.14	ENST00000485128.5	703	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAGACCTTGGAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	30008914	30013615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30012053_30012133_30013343
ENSMUSG00000042831.14_30009446_30013426_1	chr7	+	447	5	ISM	ENSMUSG00000042831.14	ENSMUST00000060834.12	982	7	1304	303	531	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTCCACGGCATCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	30009445	30013426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30009480_30011264_30011326_30011661_30011814_30012015_30012133_30013343
ENSMUSG00000042831.14_30012100_30013729_1	chr7	+	419	2	ISM	ENSMUSG00000042831.14	ENST00000485128.5	703	6	3185	-114	3185	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30012099	30013729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30012133_30013343
ENSMUSG00000042834.16_33571207_33575929_1	chr18	-	747	2	ISM	ENSMUSG00000042834.16	ENST00000453526.6	565	5	20747	-380	20559	285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTATTTTGGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	33575929	33571206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_33571893_33575868
ENSMUSG00000042834.16_33571492_33597082_1	chr18	-	765	5	FSM	ENSMUSG00000042834.16	ENSMUST00000168890.2	2185	5	0	1420	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTCTTCCACAACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	33597082	33571491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596473_33596905
ENSMUSG00000042834.16_33571741_33597264_1	chr18	-	399	5	NIC	ENSMUSG00000042834.16	novel	527	5	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTATGGGGTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	33597264	33571740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596467_33597198
ENSMUSG00000042834.16_33571741_33597264_2	chr18	-	400	5	NNC	ENSMUSG00000042834.16	novel	527	5	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTATGGGGTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	33597264	33571740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_33571888_33575868_33575947_33595073_33595141_33596430_33596473_33597198
ENSMUSG00000042834.16_33571741_33597264_3	chr18	-	405	5	FSM	ENSMUSG00000042834.16	ENST00000455559.6	527	5	27	95	27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTATGGGGTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	33597264	33571740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596473_33597198
ENSMUSG00000042842.12_33149322_33162064_1	chr13	+	1077	7	FSM	ENSMUSG00000042842.12	ENSMUST00000110293.9	2193	7	130	986	130	-981	multi-exon	TRUE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGGCTGGGCATGACT	NA	NA	NA	NA	NA	NA	NA	NA	33149321	33162064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_33149527_33152482_33152658_33155453_33155607_33156229_33156348_33158879_33159023_33161507_33161664_33161937
ENSMUSG00000042842.12_33149427_33162145_1	chr13	+	1053	7	FSM	ENSMUSG00000042842.12	ENSMUST00000110293.9	2193	7	235	905	-59	-900	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCAAGGTCATTCACAAG	NA	NA	NA	NA	NA	NA	NA	NA	33149426	33162145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_33149527_33152482_33152658_33155453_33155607_33156229_33156348_33158879_33159023_33161507_33161664_33161937
ENSMUSG00000042842.12_33149427_33162210_1	chr13	+	1118	7	FSM	ENSMUSG00000042842.12	ENSMUST00000110293.9	2193	7	235	840	-59	-835	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCAGCCAATATAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	33149426	33162210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_33149527_33152482_33152658_33155453_33155607_33156229_33156348_33158879_33159023_33161507_33161664_33161937
ENSMUSG00000042842.12_33152585_33162373_1	chr13	+	1079	6	ISM	ENSMUSG00000042842.12	ENSMUST00000110293.9	2193	7	3393	677	3099	-672	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTTTCTCATGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	33152584	33162373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_33152658_33155453_33155607_33156229_33156348_33158879_33159023_33161507_33161664_33161937
ENSMUSG00000042842.12_33155481_33162508_1	chr13	+	1114	5	ISM	ENSMUSG00000042842.12	ENSMUST00000164541.2	1719	6	5995	537	5995	-537	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCAAGTTCAAAGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	33155480	33162508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_33155607_33156229_33156348_33158879_33159023_33161507_33161664_33161937
ENSMUSG00000042870.16_75760333_75796516_1	chr8	+	2034	15	FSM	ENSMUSG00000042870.16	ENSMUST00000165630.3	2267	15	0	233	0	-233	multi-exon	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGAAACTGCACCCATCGA	NA	NA	NA	NA	NA	NA	NA	NA	75760332	75796516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_75760456_75774620_75774706_75776817_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
ENSMUSG00000042870.16_75774656_75796622_1	chr8	+	1982	14	ISM	ENSMUSG00000042870.16	ENSMUST00000165630.3	2267	15	14323	127	14291	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCCTTGCTCTGTACCTC	NA	NA	NA	NA	NA	NA	NA	NA	75774655	75796622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_75774706_75776817_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
ENSMUSG00000042870.16_75776844_75796749_1	chr8	+	2033	13	ISM	ENSMUSG00000042870.16	ENSMUST00000165630.3	2267	15	16511	0	16479	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCTCTGGCGGAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	75776843	75796749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
ENSMUSG00000042873.12_113148642_113153479_1	chr6	-	351	2	ISM	ENSMUSG00000042873.12	ENST00000287585.8	2197	4	18833	975	18833	-975	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATCCTGAGTCTGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	113153479	113148641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113148920_113153406
ENSMUSG00000042873.12_113148704_113153530_1	chr6	-	340	2	ISM	ENSMUSG00000042873.12	ENST00000287585.8	2197	4	18782	1037	18782	-1037	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCGGGCTCTGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	113153530	113148703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113148920_113153406
ENSMUSG00000042873.12_113148763_113153612_1	chr6	-	363	2	ISM	ENSMUSG00000042873.12	ENST00000287585.8	2197	4	18700	1096	18700	-1096	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTCATTCCTGCGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	113153612	113148762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113148920_113153406
ENSMUSG00000042873.12_113148898_113170917_1	chr6	-	398	3	ISM	ENSMUSG00000042873.12	ENST00000287585.8	2197	4	1395	1231	1395	-1231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTGCTGCGGCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	113170917	113148897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113148920_113153406_113153644_113170778
ENSMUSG00000042888.11_101436080_101437766_1	chr14	-	951	2	FSM	ENSMUSG00000042888.11	ENST00000335524.7	1919	2	33	935	0	-935	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGCTCACCTTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	101437766	101436079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_101436922_101437657
ENSMUSG00000042901.11_183078871_183103520_1	chr1	+	1190	10	FSM	ENSMUSG00000042901.11	ENSMUST00000109166.8	4279	10	278	2811	-78	-944	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGGCAGGAAGTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	183078870	183103520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
ENSMUSG00000042901.11_183078949_183103680_1	chr1	+	1272	10	FSM	ENSMUSG00000042901.11	ENSMUST00000109166.8	4279	10	356	2651	0	-784	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCACTTTTCTATTAATT	NA	NA	NA	NA	NA	NA	NA	NA	183078948	183103680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
ENSMUSG00000042903.9_100298427_100302178_1	chrX	+	684	3	FSM	ENSMUSG00000042903.9	ENST00000341558.3	1345	3	0	661	0	-661	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAATGCCAGCCTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	100298426	100302178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_100298598_100298762_100298880_100301782
ENSMUSG00000042903.9_100298761_100302352_1	chrX	+	689	2	ISM	ENSMUSG00000042903.9	ENST00000341558.3	1345	3	334	487	334	-487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGCCTCCCTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	100298760	100302352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_100298880_100301782
ENSMUSG00000042918.18_45290208_45294315_1	chr7	+	1109	9	NNC	ENSMUSG00000042918.18	novel	1242	9	NA	NA	24	-98	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGGGCTCTGGGCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	45290207	45294315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_45290264_45291201_45291241_45291748_45291889_45292171_45292354_45292660_45292749_45292927_45293130_45293691_45293853_45293942_45293998_45294129
ENSMUSG00000042918.18_45290216_45294433_1	chr7	+	1226	9	NIC	ENSMUSG00000042918.18	novel	1242	9	NA	NA	32	20	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	2458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCATCTGCATCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	45290215	45294433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_45290264_45291201_45291241_45291748_45291889_45292171_45292354_45292660_45292749_45292920_45293130_45293691_45293853_45293942_45293998_45294129
ENSMUSG00000042918.18_45290222_45294433_1	chr7	+	1220	9	NIC	ENSMUSG00000042918.18	novel	1242	9	NA	NA	38	20	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	2416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCATCTGCATCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	45290221	45294433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_45290264_45291201_45291241_45291748_45291889_45292171_45292354_45292660_45292749_45292920_45293130_45293691_45293853_45293942_45293998_45294129
ENSMUSG00000042918.18_45290227_45294331_1	chr7	+	1112	9	NNC	ENSMUSG00000042918.18	novel	1242	9	NA	NA	43	-82	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	733	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGGCCCCAGCATCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	45290226	45294331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_45290264_45291201_45291241_45291748_45291889_45292171_45292354_45292660_45292749_45292920_45293130_45293691_45293853_45293942_45293998_45294130
ENSMUSG00000042918.18_45290232_45294433_1	chr7	+	1192	8	NNC	ENSMUSG00000042918.18	novel	1242	9	NA	NA	48	20	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCATCTGCATCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	45290231	45294433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_45290264_45291727_45291889_45292171_45292354_45292660_45292749_45292920_45293130_45293691_45293853_45293942_45293998_45294129
ENSMUSG00000042918.18_45290241_45294433_1	chr7	+	1201	9	NIC	ENSMUSG00000042918.18	novel	1242	9	NA	NA	57	20	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	2088	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCATCTGCATCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	45290240	45294433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_45290264_45291201_45291241_45291748_45291889_45292171_45292354_45292660_45292749_45292920_45293130_45293691_45293853_45293942_45293998_45294129
ENSMUSG00000042918.18_45290248_45294433_1	chr7	+	1194	9	NIC	ENSMUSG00000042918.18	novel	1242	9	NA	NA	64	20	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1889	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCATCTGCATCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	45290247	45294433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_45290264_45291201_45291241_45291748_45291889_45292171_45292354_45292660_45292749_45292920_45293130_45293691_45293853_45293942_45293998_45294129
ENSMUSG00000042918.18_45291200_45294433_1	chr7	+	1173	8	NNC	ENSMUSG00000042918.18	novel	1242	9	NA	NA	219	20	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCATCTGCATCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	45291199	45294433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_45291241_45291748_45291889_45292171_45292354_45292660_45292749_45292927_45293130_45293691_45293853_45293942_45293998_45294129
ENSMUSG00000042918.18_45291200_45294433_2	chr7	+	1179	8	NNC	ENSMUSG00000042918.18	novel	1242	9	NA	NA	219	20	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	795	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCATCTGCATCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	45291199	45294433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_45291241_45291748_45291889_45292171_45292354_45292660_45292749_45292920_45293130_45293692_45293853_45293942_45293998_45294129
ENSMUSG00000042918.18_45291749_45294433_1	chr7	+	1138	7	NNC	ENSMUSG00000042918.18	novel	1242	9	NA	NA	768	20	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	743	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCATCTGCATCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	45291748	45294433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_45291889_45292171_45292354_45292660_45292749_45292920_45293130_45293691_45293853_45293943_45293998_45294129
ENSMUSG00000042918.18_45291749_45294433_2	chr7	+	1126	7	NNC	ENSMUSG00000042918.18	novel	1242	9	NA	NA	768	20	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCATCTGCATCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	45291748	45294433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_45291889_45292171_45292354_45292660_45292749_45292920_45293130_45293691_45293853_45293942_45293985_45294129
ENSMUSG00000042918.18_45291749_45294433_3	chr7	+	1138	7	NNC	ENSMUSG00000042918.18	novel	1242	9	NA	NA	768	20	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	774	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCATCTGCATCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	45291748	45294433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_45291889_45292171_45292354_45292660_45292749_45292920_45293130_45293691_45293853_45293942_45293998_45294130
ENSMUSG00000042918.18_45291749_45294433_4	chr7	+	1132	7	NNC	ENSMUSG00000042918.18	novel	1242	9	NA	NA	768	20	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCATCTGCATCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	45291748	45294433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_45291889_45292171_45292354_45292667_45292749_45292920_45293130_45293691_45293853_45293942_45293998_45294129
ENSMUSG00000042961.14_7236544_7237162_1	chr15	-	568	2	ISM	ENSMUSG00000042961.14	ENST00000397202.6	2028	12	42496	0	42496	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGGGGGTAAATTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	7237162	7236543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_7236751_7236801
ENSMUSG00000042961.14_7236567_7236891_1	chr15	-	274	2	ISM	ENSMUSG00000042961.14	ENST00000397202.6	2028	12	42767	23	42767	-23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGACTAGTCCATGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	7236891	7236566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_7236751_7236801
ENSMUSG00000042961.14_7237245_7261125_1	chr15	-	531	7	ISM	ENSMUSG00000042961.14	ENST00000354891.7	3494	23	86709	701	18533	-701	internal_fragment	TRUE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGAGGCCTTGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	7261125	7237244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_7237284_7237982_7238087_7241611_7241696_7249105_7249250_7252228_7252308_7254125_7254150_7261068
ENSMUSG00000042961.14_7249161_7261162_1	chr15	-	262	3	ISM	ENSMUSG00000042961.14	ENST00000397202.6	2028	12	18496	12617	18496	-12617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAACAGTGACTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	7261162	7249160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_7249250_7252228_7252308_7261068
ENSMUSG00000042961.14_7249200_7267287_1	chr15	-	521	6	ISM	ENSMUSG00000042961.14	ENST00000354891.7	3494	23	80547	12656	12371	-12656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGATGGCCTGTTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	7267287	7249199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_7249250_7252228_7252308_7254125_7254150_7261068_7261250_7263665_7263783_7267217
ENSMUSG00000042961.14_7261147_7272073_1	chr15	-	523	4	ISM	ENSMUSG00000042961.14	ENST00000397202.6	2028	12	7585	24603	7585	-24603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCAGCTGTCGGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	7272073	7261146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_7261250_7263665_7263783_7267217_7267330_7271882
ENSMUSG00000042961.14_7272061_7279571_1	chr15	-	253	3	ISM	ENSMUSG00000042961.14	ENST00000397202.6	2028	12	87	35517	87	-35517	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCCTCAGCATTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	7279571	7272060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_7272127_7273263_7273390_7279510
ENSMUSG00000042978.12_125848196_125891821_1	chr7	+	1350	4	FSM	ENSMUSG00000042978.12	ENST00000671413.3	1512	4	162	0	162	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTGCAGCGCAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	125848195	125891821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_125848285_125889028_125889262_125890214_125890418_125890996
ENSMUSG00000042992.16_134617924_134687078_1	chr6	+	439	4	FSM	ENSMUSG00000042992.16	ENST00000542728.5	558	4	-29	148	21	-148	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATCCAGAAGGTGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	134617923	134687078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_134617989_134621291_134621436_134662926_134663085_134687006
ENSMUSG00000042992.16_134618218_134687318_1	chr6	+	617	4	FSM	ENSMUSG00000042992.16	ENSMUST00000062755.10	1764	4	315	832	265	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGTGGTAGTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	134618217	134687318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_134618221_134621291_134621436_134662926_134663085_134687006
ENSMUSG00000042992.16_134621292_134687117_1	chr6	+	413	3	ISM	ENSMUSG00000042992.16	ENST00000542728.5	558	4	3339	109	3339	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCATCCAGATGGGCATAGA	NA	NA	NA	NA	NA	NA	NA	NA	134621291	134687117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_134621436_134662926_134663085_134687006
ENSMUSG00000042992.16_134662923_134687318_1	chr6	+	474	2	ISM	ENSMUSG00000042992.16	ENST00000542728.5	558	4	44970	-92	44970	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGTGGTAGTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	134662922	134687318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_134663085_134687006
ENSMUSG00000042997.14_53359858_53369097_2	chr3	-	463	4	ISM	ENSMUSG00000042997.14	ENST00000379599.6	707	5	776	0	776	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCGTGGCACAGCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	53369097	53359857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_53360071_53360962_53361076_53363846_53363939_53369052
ENSMUSG00000042997.14_53360040_53369769_1	chr3	-	421	5	FSM	ENSMUSG00000042997.14	ENST00000379599.6	707	5	104	182	104	-182	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGCTGAACCTCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	53369769	53360039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_53360071_53360962_53361076_53363846_53363939_53369052_53369201_53369732
ENSMUSG00000043029.3_73158414_73186089_1	chr11	+	1956	15	ISM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	52	1564	52	-1564	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCGGTGCTGGAGCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	73158413	73186089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_73158489_73160485_73160607_73168553_73168659_73168765_73168853_73169741_73169897_73170587_73170765_73172499_73172641_73174418_73174700_73176687_73176865_73178176_73178336_73178993_73179096_73180060_73180135_73182394_73182561_73184758_73184826_73186020
ENSMUSG00000043029.3_73158425_73168823_1	chr11	+	348	4	ISM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	63	18830	63	-18830	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACCCCATCCAATCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	73158424	73168823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_73158489_73160485_73160607_73168553_73168659_73168765
ENSMUSG00000043029.3_73160482_73186218_1	chr11	+	2014	14	ISM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	2120	1435	2120	-1435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACATGCTCATTGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	73160481	73186218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_73160607_73168553_73168659_73168765_73168853_73169741_73169897_73170587_73170765_73172499_73172641_73174418_73174700_73176687_73176865_73178176_73178336_73178993_73179096_73180060_73180135_73182394_73182561_73184758_73184826_73186020
ENSMUSG00000043029.3_73168601_73187322_1	chr11	+	1987	14	ISM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	10239	331	10239	-331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCTGTGCAAAGTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	73168600	73187322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_73168659_73168765_73168853_73169741_73169897_73170587_73170765_73172499_73172641_73174418_73174700_73176687_73176865_73178176_73178336_73178993_73179096_73180060_73180135_73182394_73182561_73184758_73184826_73186020_73186296_73187254
ENSMUSG00000043029.3_73174618_73178263_1	chr11	+	346	3	ISM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	16256	9390	16256	-9390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGCTTCTATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	73174617	73178263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_73174700_73176687_73176865_73178176
ENSMUSG00000043029.3_73184787_73187271_1	chr11	+	331	3	ISM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	26425	382	26425	-382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTTTGAGAAAATGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	73184786	73187271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_73184826_73186020_73186296_73187254
ENSMUSG00000043029.3_73186104_73187577_1	chr11	+	329	3	ISM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	27742	76	27742	-76	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAACACACGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	73186103	73187577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_73186296_73187254_73187368_73187553
ENSMUSG00000043029.3_73186205_73188005_1	chr11	+	361	4	ISM	ENSMUSG00000043029.3	ENST00000301365.8	2506	18	27843	22	27843	-22	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCAGAAACGTCGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	73186204	73188005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_73186296_73187254_73187368_73187553_73187634_73187928
ENSMUSG00000043061.11_30634529_30641216_1	chr12	+	2869	5	FSM	ENSMUSG00000043061.11	ENSMUST00000057151.10	2971	5	104	-2	104	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACAGTGTGCTTTCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	30634528	30641216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_30634562_30635468_30635590_30637198_30637254_30638472_30638567_30638650
ENSMUSG00000043067.16_24325575_24336071_1	chr9	-	584	5	NNC	ENSMUSG00000043067.16	novel	909	9	NA	NA	9665	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGACAGTGACTGCACGT	NA	NA	NA	NA	NA	NA	NA	NA	24336071	24325574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_24325720_24332376_24332497_24333555_24333650_24334308_24334484_24336021
ENSMUSG00000043067.16_24325575_24336071_2	chr9	-	590	5	ISM	ENSMUSG00000043067.16	ENST00000426647.2	909	9	9665	0	9665	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGACAGTGACTGCACGT	NA	NA	NA	NA	NA	NA	NA	NA	24336071	24325574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_24325720_24332376_24332497_24333555_24333656_24334308_24334484_24336021
ENSMUSG00000043067.16_24325575_24337456_1	chr9	-	687	6	ISM	ENSMUSG00000043067.16	ENST00000426647.2	909	9	8280	0	8280	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGACAGTGACTGCACGT	NA	NA	NA	NA	NA	NA	NA	NA	24337456	24325574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_24325720_24332376_24332497_24333555_24333656_24334308_24334484_24336021_24336142_24337429
ENSMUSG00000043067.16_24325676_24341750_1	chr9	-	608	7	ISM	ENSMUSG00000043067.16	ENST00000426647.2	909	9	3986	101	3986	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACGCTGGGAAAACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	24341750	24325675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_24325720_24332376_24332497_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726
ENSMUSG00000043067.16_24332376_24343729_1	chr9	-	669	6	NNC	ENSMUSG00000043067.16	novel	909	9	NA	NA	2007	-6801	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTATTTTACACAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	24343729	24332375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_24332497_24333555_24333656_24334308_24334484_24336021_24336171_24341726_24341777_24343655
ENSMUSG00000043067.16_24332445_24345669_1	chr9	-	637	7	NNC	ENSMUSG00000043067.16	novel	909	9	NA	NA	67	-6870	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAATTGATGAAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	24345669	24332444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_24332497_24333555_24333656_24334308_24334484_24336021_24336171_24341722_24341777_24343655_24343728_24345634
ENSMUSG00000043067.16_24332456_24345708_1	chr9	-	657	8	ISM	ENSMUSG00000043067.16	ENST00000426647.2	909	9	28	6881	28	-6881	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	876	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACGTGAAGAAGGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	24345708	24332455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_24332497_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634
ENSMUSG00000043088.17_113439886_113445431_1	chr6	+	638	8	ISM	ENSMUSG00000043088.17	ENST00000454190.6	1467	11	99	1561	99	-1561	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCCCTTCCTGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	113439885	113445431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113439929_113440913_113440983_113441721_113441789_113442675_113442852_113442940_113442989_113443069_113443116_113443213_113443369_113445397
ENSMUSG00000043088.17_113441767_113445918_1	chr6	+	637	7	ISM	ENSMUSG00000043088.17	ENST00000454190.6	1467	11	1980	1074	1980	-1074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTCTTGAGTGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	113441766	113445918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113441789_113442675_113442852_113442940_113442989_113443069_113443116_113443213_113443369_113445397_113445467_113445797
ENSMUSG00000043088.17_113442676_113446090_1	chr6	+	715	7	ISM	ENSMUSG00000043088.17	ENST00000454190.6	1467	11	2889	902	2889	-902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCACCTTTGGTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	113442675	113446090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113442852_113442940_113442989_113443069_113443116_113443213_113443369_113445397_113445467_113445797_113445919_113445990
ENSMUSG00000043088.17_113442805_113446551_1	chr6	+	619	8	ISM	ENSMUSG00000043088.17	ENST00000454190.6	1467	11	3018	441	3018	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGCGGACTCAGAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	113442804	113446551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113442852_113442940_113442989_113443069_113443116_113443213_113443369_113445397_113445467_113445797_113445919_113445990_113446090_113446517
ENSMUSG00000043088.17_113443321_113446749_1	chr6	+	569	5	ISM	ENSMUSG00000043088.17	ENST00000454190.6	1467	11	3534	243	3534	-243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCGGGTCCCAGCACCG	NA	NA	NA	NA	NA	NA	NA	NA	113443320	113446749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113443369_113445397_113445467_113445797_113445919_113445990_113446090_113446517
ENSMUSG00000043088.17_113445797_113446992_1	chr6	+	696	3	ISM	ENSMUSG00000043088.17	ENST00000454190.6	1467	11	6010	0	6010	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCGGTGCTTGAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	113445796	113446992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113445919_113445990_113446090_113446517
ENSMUSG00000043091.10_98927917_98935411_1	chr15	+	1251	4	NNC	ENSMUSG00000043091.10	novel	1982	4	NA	NA	145	-580	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCAATGCCTGCTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	98927916	98935411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_98928306_98931980_98932198_98932329_98932479_98934915
ENSMUSG00000043091.10_98927928_98935416_1	chr15	+	1245	4	NNC	ENSMUSG00000043091.10	novel	1982	4	NA	NA	156	-575	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGCTTTGAGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	98927927	98935416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_98928306_98931974_98932198_98932335_98932479_98934915
ENSMUSG00000043091.10_98928202_98935613_1	chr15	+	1174	4	FSM	ENSMUSG00000043091.10	ENSMUST00000058914.10	1982	4	430	378	430	-378	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCACTGTGGTACCCG	NA	NA	NA	NA	NA	NA	NA	NA	98928201	98935613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_98928306_98931974_98932198_98932329_98932479_98934915
ENSMUSG00000043091.10_98932127_98935991_1	chr15	+	1296	3	ISM	ENSMUSG00000043091.10	ENSMUST00000058914.10	1982	4	4355	0	4355	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCATCTGGTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	98932126	98935991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_98932198_98932329_98932479_98934915
ENSMUSG00000043131.15_83306849_83318089_1	chr6	+	1491	5	ISM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	3851	2669	3787	-2668	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTAAAGCCACTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	83306848	83318089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157
ENSMUSG00000043131.15_83306849_83318196_1	chr6	+	1598	5	ISM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	3851	2562	3787	-2561	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAACTTGAAACTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	83306848	83318196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157
ENSMUSG00000043131.15_83309442_83318327_1	chr6	+	1556	4	ISM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	6444	2431	6380	-2430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGAGAGCTGGAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	83309441	83318327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83309530_83311057_83311192_83315262_83315427_83317157
ENSMUSG00000043131.15_83311055_83318431_1	chr6	+	1575	3	ISM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	8057	2327	7993	-2326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATCAAAACTTGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	83311054	83318431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83311192_83315262_83315427_83317157
ENSMUSG00000043131.15_83315349_83318637_1	chr6	+	1558	2	ISM	ENSMUSG00000043131.15	ENSMUST00000038658.15	4119	4	12287	2120	12287	-2120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCATTGGCCTCCTATAT	NA	NA	NA	NA	NA	NA	NA	NA	83315348	83318637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83315427_83317157
ENSMUSG00000043131.15_83315408_83318684_1	chr6	+	1546	2	ISM	ENSMUSG00000043131.15	ENSMUST00000038658.15	4119	4	12346	2073	12346	-2073	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTTATTTATTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	83315407	83318684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83315427_83317157
ENSMUSG00000043162.8_57665666_57668864_1	chr6	-	1269	2	FSM	ENSMUSG00000043162.8	ENSMUST00000053386.6	3573	2	199	2105	199	-2105	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTTCCCCTAAAGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	57668864	57665665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_57666864_57668793
ENSMUSG00000043162.8_57665767_57669063_1	chr6	-	1367	2	FSM	ENSMUSG00000043162.8	ENSMUST00000053386.6	3573	2	0	2206	0	-2206	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGAGTCCTCCGGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	57669063	57665766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_57666864_57668793
ENSMUSG00000043190.15_76150886_76156380_1	chr13	-	467	2	NNC	ENSMUSG00000043190.15	novel	595	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGTAATTTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	76156380	76150885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_76151208_76156235
ENSMUSG00000043190.15_76150886_76156380_2	chr13	-	473	2	FSM	ENSMUSG00000043190.15	ENST00000513950.2	433	2	10	-50	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGTAATTTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	76156380	76150885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_76151208_76156229
ENSMUSG00000043207.11_120917629_120923098_1	chr4	-	877	2	ISM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	32340	1195	32340	-1195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACACCAATCAGGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	120923098	120917628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120918418_120923010
ENSMUSG00000043207.11_120917841_120931732_1	chr4	-	889	4	ISM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	23706	1407	23706	-1407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTTTTGCAAAGCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	120931732	120917840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669
ENSMUSG00000043207.11_120917910_120931835_1	chr4	-	923	4	ISM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	23603	1476	23603	-1476	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCACTATGTGGAATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	120931835	120917909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669
ENSMUSG00000043207.11_120918162_120940083_1	chr4	-	898	6	ISM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	15355	1728	15355	-1728	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTATTCTGTCCTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120940083	120918161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017
ENSMUSG00000043207.11_120918317_120940622_1	chr4	-	947	7	ISM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	14816	1883	14816	-1883	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCAAGCTGAACAAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	120940622	120918316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505
ENSMUSG00000043207.11_120923049_120944579_1	chr4	-	882	7	ISM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	10859	6615	10859	-6615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCATCTTTCAGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	120944579	120923048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505
ENSMUSG00000043207.11_120925907_120952895_1	chr4	-	936	7	ISM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	2543	9473	2543	-9473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTGGCATGACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	120952895	120925906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748
ENSMUSG00000043207.11_120931732_120955199_1	chr4	-	895	7	ISM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	239	15298	239	-15298	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCATGGAAGCCCGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	120955199	120931731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
ENSMUSG00000043207.11_120931816_120955270_1	chr4	-	882	7	ISM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	168	15382	168	-15382	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTCTTCAAGAACAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	120955270	120931815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
ENSMUSG00000043207.11_120938431_120955438_1	chr4	-	949	6	ISM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	0	21997	0	-21997	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATTGAAGTGATGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	120955438	120938430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
ENSMUSG00000043243.16_72056309_72057604_1	chr8	+	472	4	ISM	ENSMUSG00000043243.16	ENST00000335393.8	649	5	2	754	2	-754	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTCACCCGGGACTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	72056308	72057604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72056472_72056564_72056724_72057381_72057499_72057571
ENSMUSG00000043243.16_72056378_72057637_1	chr8	+	436	4	ISM	ENSMUSG00000043243.16	ENST00000335393.8	649	5	71	721	71	-721	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCTTTGTATGGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	72056377	72057637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72056472_72056564_72056724_72057381_72057499_72057571
ENSMUSG00000043243.16_72056414_72058313_1	chr8	+	497	5	FSM	ENSMUSG00000043243.16	ENST00000335393.8	649	5	107	45	107	-45	multi-exon	FALSE	canonical	NA	NA	NA	NA	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACAGAGATGTCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	72056413	72058313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_72056472_72056564_72056724_72057381_72057499_72057571_72057672_72058250
ENSMUSG00000043243.16_72056445_72057672_1	chr8	+	404	4	ISM	ENSMUSG00000043243.16	ENST00000335393.8	649	5	138	686	138	-686	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTGGTGAGTGGACACC	NA	NA	NA	NA	NA	NA	NA	NA	72056444	72057672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72056472_72056564_72056724_72057381_72057499_72057571
ENSMUSG00000043243.16_72056563_72058359_1	chr8	+	487	4	ISM	ENSMUSG00000043243.16	ENST00000335393.8	649	5	256	-1	256	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGAGCTCCCCACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	72056562	72058359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_72056724_72057381_72057499_72057571_72057672_72058250
ENSMUSG00000043252.9_15266159_15284421_1	chr4	+	1854	2	FSM	ENSMUSG00000043252.9	ENST00000418210.2	4388	2	207	2327	207	-2327	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAATTGTCTCAATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	15266158	15284421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_15266750_15283158
ENSMUSG00000043252.9_15266324_15284619_1	chr4	+	1887	2	FSM	ENSMUSG00000043252.9	ENST00000418210.2	4388	2	372	2129	372	-2129	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGACTTCACTTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	15266323	15284619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_15266750_15283158
ENSMUSG00000043252.9_15266456_15284715_1	chr4	+	1851	2	FSM	ENSMUSG00000043252.9	ENST00000418210.2	4388	2	504	2033	504	-2033	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAGAGAAATCCCGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	15266455	15284715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_15266750_15283158
ENSMUSG00000043257.16_133389815_133392268_1	chr4	-	588	2	ISM	ENSMUSG00000043257.16	ENST00000374145.6	1756	4	7452	0	7452	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTCAAGGAATGAAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	133392268	133389814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133390103_133391968
ENSMUSG00000043257.16_133389815_133400798_1	chr4	-	1696	4	FSM	ENSMUSG00000043257.16	ENST00000455364.2	1696	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTCAAGGAATGAAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	133400798	133389814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_133390103_133391968_133393091_133397048_133397165_133400628
ENSMUSG00000043257.16_133392683_133399548_1	chr4	-	582	3	ISM	ENSMUSG00000043257.16	ENST00000374145.6	1756	4	172	2868	172	-2868	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCAGCCGGCTACTC	NA	NA	NA	NA	NA	NA	NA	NA	133399548	133392682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133393091_133397048_133397162_133399487
ENSMUSG00000043257.16_133392723_133399615_1	chr4	-	609	3	ISM	ENSMUSG00000043257.16	ENST00000374145.6	1756	4	105	2908	105	-2908	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCAGCGTTGCTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	133399615	133392722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133393091_133397048_133397162_133399487
ENSMUSG00000043257.16_133392791_133399656_1	chr4	-	582	3	ISM	ENSMUSG00000043257.16	ENST00000374145.6	1756	4	64	2976	64	-2976	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGCTGGCTGCAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	133399656	133392790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133393091_133397048_133397162_133399487
ENSMUSG00000043259.16_70276865_70378555_1	chr10	+	1075	10	ISM	ENSMUSG00000043259.16	ENST00000618427.4	3321	15	155	16010	21	-11872	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTGTCCCTTCCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	70276864	70378555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70276910_70278235_70278307_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356670_70356756_70370513_70370725_70372195_70372335_70378473
ENSMUSG00000043259.16_70284588_70334779_1	chr10	+	442	4	ISM	ENSMUSG00000043259.16	ENST00000435852.6	1675	13	7792	55648	7744	-55648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTGGAAAAATTACGGG	NA	NA	NA	NA	NA	NA	NA	NA	70284587	70334779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70284645_70286856_70287059_70312983_70313103_70334715
ENSMUSG00000043259.16_70286854_70393200_1	chr10	+	1638	12	NNC	ENSMUSG00000043259.16	novel	1849	15	NA	NA	10010	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTCACTTCCCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	70286853	70393200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_70287059_70312983_70313103_70334715_70334780_70356670_70356756_70370513_70370725_70372195_70372335_70378473_70378560_70380157_70380361_70387524_70387621_70388858_70389056_70390317_70390420_70393069
ENSMUSG00000043259.16_70286968_70370591_1	chr10	+	437	5	ISM	ENSMUSG00000043259.16	ENST00000435852.6	1675	13	10172	19836	10124	-19836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTACTCTATCACATCACC	NA	NA	NA	NA	NA	NA	NA	NA	70286967	70370591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70287059_70312983_70313103_70334715_70334780_70356670_70356756_70370513
ENSMUSG00000043259.16_70334714_70389056_1	chr10	+	1081	8	NNC	ENSMUSG00000043259.16	novel	3321	15	NA	NA	57870	-1371	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGCAGCCTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	70334713	70389056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_70334780_70356670_70356756_70370513_70370725_70372195_70372335_70378473_70378560_70380157_70380361_70387524_70387621_70388861
ENSMUSG00000043259.16_70356669_70390419_1	chr10	+	1117	8	ISM	ENSMUSG00000043259.16	ENST00000435852.6	1675	13	79873	8	79825	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTGAGTGGAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	70356668	70390419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388858_70389056_70390317
ENSMUSG00000043259.16_70356710_70387556_1	chr10	+	428	4	ISM	ENSMUSG00000043259.16	ENST00000611933.4	2916	12	80000	6961	79866	-2871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTATGACCGATGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	70356709	70387556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70356756_70370513_70370725_70372195_70372335_70387524
ENSMUSG00000043259.16_70370511_70387620_1	chr10	+	449	3	ISM	ENSMUSG00000043259.16	ENST00000611933.4	2916	12	93801	6897	93667	-2807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAACATGGCGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	70370510	70387620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70370725_70372195_70372335_70387524
ENSMUSG00000043259.16_70370606_70393200_1	chr10	+	1069	8	ISM	ENSMUSG00000043259.16	ENST00000468840.6	1849	15	93999	0	93762	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTCACTTCCCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	70370605	70393200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388858_70389056_70390317_70390420_70393069
ENSMUSG00000043259.16_70370618_70388902_1	chr10	+	386	4	ISM	ENSMUSG00000043259.16	ENST00000611933.4	2916	12	93908	5615	93774	-1525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCCTCTTTACCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	70370617	70388902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70370725_70372195_70372335_70387524_70387621_70388858
ENSMUSG00000043259.16_70370650_70388971_1	chr10	+	423	4	ISM	ENSMUSG00000043259.16	ENST00000611933.4	2916	12	93940	5546	93806	-1456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGAGGACCCTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	70370649	70388971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70370725_70372195_70372335_70387524_70387621_70388858
ENSMUSG00000043259.16_70370709_70389021_1	chr10	+	414	4	ISM	ENSMUSG00000043259.16	ENST00000611933.4	2916	12	93999	5496	93865	-1406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTCCATGTCCAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	70370708	70389021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70370725_70372195_70372335_70387524_70387621_70388858
ENSMUSG00000043259.16_70372251_70401178_1	chr10	+	582	5	ISM	ENSMUSG00000043259.16	ENST00000422313.6	1505	12	95407	68	95407	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGATAAATCAGAGATTA	NA	NA	NA	NA	NA	NA	NA	NA	70372250	70401178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70372335_70378473_70378556_70380157_70380361_70387524_70387655_70401095
ENSMUSG00000043259.16_70378501_70393437_1	chr10	+	1021	6	ISM	ENSMUSG00000043259.16	ENST00000468840.6	1849	15	101894	-237	101657	237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTCTCAAAAACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	70378500	70393437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70378556_70380157_70380361_70387524_70387621_70388858_70389056_70390317_70390420_70393069
ENSMUSG00000043259.16_70380253_70393605_1	chr10	+	1039	5	ISM	ENSMUSG00000043259.16	ENST00000468840.6	1849	15	103646	-405	103409	405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGGAAAACAGCTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	70380252	70393605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70380361_70387524_70387621_70388858_70389056_70390317_70390420_70393069
ENSMUSG00000043259.16_70387525_70393086_1	chr10	+	412	4	ISM	ENSMUSG00000043259.16	ENST00000468840.6	1849	15	110918	114	110681	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATGCCGATGGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	70387524	70393086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70387621_70388858_70389056_70390317_70390420_70393069
ENSMUSG00000043284.13_60755278_60769631_2	chr11	-	990	2	FSM	ENSMUSG00000043284.13	ENSMUST00000062677.12	1457	2	467	0	233	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTCTCTTTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	60769631	60755277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_60756175_60769538
ENSMUSG00000043284.13_60755386_60769864_2	chr11	-	1115	2	FSM	ENSMUSG00000043284.13	ENSMUST00000062677.12	1457	2	234	108	0	-108	multi-exon	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGGGGTGTGAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	60769864	60755385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_60756175_60769538
ENSMUSG00000043286.13_29095815_29099941_1	chr17	+	572	5	NNC	ENSMUSG00000043286.13	novel	706	6	NA	NA	21	-5993	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	689	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTTCCCGAGGGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	29095814	29099941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_29096013_29096355_29096427_29097339_29097550_29098409_29098471_29099909
ENSMUSG00000043286.13_29095815_29099941_2	chr17	+	570	5	NNC	ENSMUSG00000043286.13	novel	706	6	NA	NA	21	-5993	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTTCCCGAGGGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	29095814	29099941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_29096030_29096374_29096427_29097339_29097550_29098409_29098471_29099909
ENSMUSG00000043286.13_29095815_29099941_3	chr17	+	573	5	ISM	ENSMUSG00000043286.13	ENST00000636260.2	706	6	21	5993	21	-5993	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTTCCCGAGGGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	29095814	29099941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_29096019_29096360_29096427_29097339_29097550_29098409_29098471_29099909
ENSMUSG00000043286.13_29095815_29099941_4	chr17	+	584	5	NNC	ENSMUSG00000043286.13	novel	706	6	NA	NA	21	-5993	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTTCCCGAGGGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	29095814	29099941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_29096030_29096360_29096427_29097339_29097550_29098409_29098471_29099909
ENSMUSG00000043300.3_69481491_69483225_1	chr3	-	955	2	ISM	ENSMUSG00000043300.3	ENST00000417187.2	1139	3	72933	86	23068	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTTTCTCGATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	69483225	69481490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_69482379_69483158
ENSMUSG00000043300.3_69481491_69483293_1	chr3	-	1015	2	NNC	ENSMUSG00000043300.3	novel	1139	3	NA	NA	23000	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1537	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTTTCTCGATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	69483293	69481490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_69482379_69483166
ENSMUSG00000043300.3_69481491_69483293_2	chr3	-	1023	2	ISM	ENSMUSG00000043300.3	ENST00000417187.2	1139	3	72865	86	23000	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1539	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTTTCTCGATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	69483293	69481490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_69482379_69483158
ENSMUSG00000043311.8_35345656_35346385_1	chr17	+	594	2	ISM	ENSMUSG00000043311.8	ENSMUST00000061859.7	2142	3	294	1446	294	-1446	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGAGCCTGCAAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	35345655	35346385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35345762_35345897
ENSMUSG00000043311.8_35345841_35347449_1	chr17	+	1422	2	FSM	ENSMUSG00000043311.8	ENST00000375911.2	2347	2	517	408	479	-382	multi-exon	FALSE	canonical	NA	NA	NA	NA	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAGAACGGACACCACAG	NA	NA	NA	NA	NA	NA	NA	NA	35345840	35347449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35347162_35347348
ENSMUSG00000043311.8_35346206_35347831_1	chr17	+	1439	2	FSM	ENSMUSG00000043311.8	ENST00000375911.2	2347	2	882	26	844	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTCCACTCAGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	35346205	35347831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35347162_35347348
ENSMUSG00000043311.8_35346265_35347845_1	chr17	+	1394	2	FSM	ENSMUSG00000043311.8	ENST00000375911.2	2347	2	941	12	903	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCCTGATGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	35346264	35347845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35347162_35347348
ENSMUSG00000043384.16_134696908_134699726_1	chrX	+	632	5	FSM	ENSMUSG00000043384.16	ENST00000361600.9	5290	5	55	4603	55	-4489	multi-exon	TRUE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGAGCTATCCTGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	134696907	134699726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_134697047_134697678_134697787_134698771_134698844_134699139_134699223_134699496
ENSMUSG00000043384.16_134696971_134699770_1	chrX	+	613	5	FSM	ENSMUSG00000043384.16	ENST00000361600.9	5290	5	118	4559	118	-4445	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAGTCATATACAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	134696970	134699770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_134697047_134697678_134697787_134698771_134698844_134699139_134699223_134699496
ENSMUSG00000043384.16_134697759_134699928_1	chrX	+	615	4	ISM	ENSMUSG00000043384.16	ENST00000361600.9	5290	5	906	4401	-578	-4287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACACAAATCATGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	134697758	134699928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_134697787_134698771_134698844_134699139_134699223_134699496
ENSMUSG00000043411.16_137335367_137343122_1	chr4	+	732	6	ISM	ENSMUSG00000043411.16	ENSMUST00000105840.8	5741	27	13916	42720	13849	-42720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAACCACACAATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	137335366	137343122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023
ENSMUSG00000043419.12_69231431_69233467_1	chr11	+	1937	2	FSM	ENSMUSG00000043419.12	ENSMUST00000129321.2	2081	2	144	0	144	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGAAAGACTGTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	69231430	69233467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69231885_69231984
ENSMUSG00000043421.9_29272773_29275058_1	chr6	+	447	2	FSM	ENSMUSG00000043421.9	ENSMUST00000054445.9	982	2	148	387	148	-127	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGTGGCTCTGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	29272772	29275058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_29272810_29274648
ENSMUSG00000043445.8_24689409_24691836_1	chr17	+	2336	2	FSM	ENSMUSG00000043445.8	ENSMUST00000053024.8	2627	2	43	248	43	-248	multi-exon	FALSE	canonical	NA	NA	NA	NA	1770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGAAGCTGTTCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	24689408	24691836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_24690124_24690215
ENSMUSG00000043445.8_24689711_24692084_1	chr17	+	2282	2	FSM	ENSMUSG00000043445.8	ENSMUST00000053024.8	2627	2	345	0	345	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCCTCTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	24689710	24692084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_24690124_24690215
ENSMUSG00000043456.18_37171560_37267592_1	chr7	-	2982	4	FSM	ENSMUSG00000043456.18	ENST00000355537.4	4810	4	1826	2	1826	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGCAGTTTCGAGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	37267592	37171559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_37172466_37178705_37180275_37193110_37193264_37267238
ENSMUSG00000043456.18_37171560_37267673_1	chr7	-	3058	4	NNC	ENSMUSG00000043456.18	novel	4810	4	NA	NA	1745	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGCAGTTTCGAGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	37267673	37171559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_37172466_37178705_37180270_37193110_37193264_37267238
ENSMUSG00000043456.18_37171802_37267848_1	chr7	-	2995	4	NNC	ENSMUSG00000043456.18	novel	4810	4	NA	NA	1570	-244	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCTTTGGAATAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	37267848	37171801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_37172461_37178701_37180275_37193110_37193264_37267238
ENSMUSG00000043456.18_37179052_37268854_1	chr7	-	2992	3	ISM	ENSMUSG00000043456.18	ENST00000355537.4	4810	4	564	7494	564	-450	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACCGAACCAGAAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	37268854	37179051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37180275_37193110_37193264_37267238
ENSMUSG00000043456.18_37179418_37269213_1	chr7	-	2985	3	ISM	ENSMUSG00000043456.18	ENST00000355537.4	4810	4	205	7860	205	-816	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGCCCTTCCTAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	37269213	37179417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_37180275_37193110_37193264_37267238
ENSMUSG00000043501.6_78735060_78735584_1	chr15	-	412	2	ISM	ENSMUSG00000043501.6	ENSMUST00000044584.6	592	4	4145	0	4145	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTTAGCATTTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	78735584	78735059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_78735351_78735463
ENSMUSG00000043501.6_78735179_78736522_1	chr15	-	385	3	ISM	ENSMUSG00000043501.6	ENSMUST00000044584.6	592	4	3207	119	3207	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCAGCTTCAGCCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	78736522	78735178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_78735351_78735463_78735624_78736469
ENSMUSG00000043501.6_78735464_78736553_1	chr15	-	236	2	ISM	ENSMUSG00000043501.6	ENST00000215886.6	372	3	3255	0	3176	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGGTCAAAGGAGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	78736553	78735463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_78735624_78736477
ENSMUSG00000043501.6_78735577_78739772_1	chr15	-	223	3	FSM	ENSMUSG00000043501.6	ENST00000215886.6	372	3	36	113	36	-113	multi-exon	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCCTCGCTTCGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	78739772	78735576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_78735624_78736477_78736553_78739671
ENSMUSG00000043510.13_110976936_110987441_1	chr5	-	602	6	FSM	ENSMUSG00000043510.13	ENSMUST00000056937.12	804	6	202	0	202	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTAATTGGAAATAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	110987441	110976935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_110977078_110978801_110978850_110982520_110982666_110983845_110983936_110984172_110984270_110987361
ENSMUSG00000043531.17_50139649_50157035_1	chr19	-	487	4	ISM	ENSMUSG00000043531.17	ENST00000369698.5	2643	19	84081	238	84081	-238	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCCCAAAGGCTACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	50157035	50139648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_50139790_50141197_50141359_50141491_50141598_50156956
ENSMUSG00000043531.17_50139765_50163543_1	chr19	-	448	5	ISM	ENSMUSG00000043531.17	ENST00000369698.5	2643	19	77573	354	77573	-354	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTCTGCTCAACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	50163543	50139764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_50139790_50141197_50141359_50141491_50141598_50156956_50157057_50163487
ENSMUSG00000043531.17_50141301_50164557_1	chr19	-	457	5	ISM	ENSMUSG00000043531.17	ENST00000369698.5	2643	19	76559	1890	76559	90	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAATCCAGTCAGCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	50164557	50141300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_50141359_50141491_50141598_50156956_50157057_50163487_50163620_50164496
ENSMUSG00000043542.13_7581514_7616876_1	chr3	+	1229	8	ISM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	12971	2020	12968	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTAGGTATTGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	7581513	7616876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7604135_7604244_7616442
ENSMUSG00000043542.13_7589185_7617135_1	chr3	+	1293	6	ISM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	20642	1761	20639	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	7589184	7617135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7604135_7604244_7616442
ENSMUSG00000043542.13_7593112_7617381_1	chr3	+	1225	4	ISM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	24569	1515	24566	246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGCTCTGAGATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	7593111	7617381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_7593190_7593644_7593745_7604135_7604244_7616442
ENSMUSG00000043542.13_7604205_7617640_1	chr3	+	1237	2	ISM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	35662	1256	35659	505	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCTCGTAGTTTATATC	NA	NA	NA	NA	NA	NA	NA	NA	7604204	7617640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_7604244_7616442
ENSMUSG00000043557.17_30056966_30076702_1	chr17	-	1838	9	NNC	ENSMUSG00000043557.17	novel	1850	9	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTTGAAACCGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	30076702	30056965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_30057101_30057410_30057564_30058778_30058948_30059770_30059923_30061092_30061381_30061818_30062116_30065294_30065625_30071415_30071591_30076563
ENSMUSG00000043557.17_30056966_30076702_2	chr17	-	1847	9	FSM	ENSMUSG00000043557.17	ENST00000681439.1	1850	9	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTTGAAACCGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	30076702	30056965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_30057101_30057410_30057564_30058778_30058957_30059770_30059923_30061092_30061381_30061818_30062116_30065294_30065625_30071415_30071591_30076563
ENSMUSG00000043557.17_30056966_30076702_3	chr17	-	1841	9	NNC	ENSMUSG00000043557.17	novel	1850	9	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTTGAAACCGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	30076702	30056965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_30057101_30057410_30057564_30058778_30058957_30059770_30059917_30061092_30061381_30061818_30062116_30065294_30065625_30071415_30071591_30076563
ENSMUSG00000043557.17_30056966_30076702_4	chr17	-	1845	9	NNC	ENSMUSG00000043557.17	novel	1850	9	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTTGAAACCGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	30076702	30056965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_30057101_30057410_30057564_30058778_30058957_30059770_30059923_30061092_30061381_30061818_30062116_30065294_30065625_30071415_30071591_30076565
ENSMUSG00000043557.17_30056966_30076702_5	chr17	-	1840	9	NNC	ENSMUSG00000043557.17	novel	1850	9	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTTGAAACCGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	30076702	30056965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_30057101_30057410_30057564_30058778_30058957_30059770_30059923_30061092_30061381_30061825_30062116_30065294_30065625_30071415_30071591_30076563
ENSMUSG00000043557.17_30056966_30076702_6	chr17	-	1840	9	NNC	ENSMUSG00000043557.17	novel	1850	9	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTTGAAACCGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	30076702	30056965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_30057101_30057410_30057564_30058778_30058957_30059770_30059923_30061099_30061381_30061818_30062116_30065294_30065625_30071415_30071591_30076563
ENSMUSG00000043587.16_96705864_96721160_1	chr9	-	1974	3	ISM	ENSMUSG00000043587.16	ENSMUST00000119141.8	2768	7	50326	225	50306	-225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGGCCAGTTTTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	96721160	96705863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_96707676_96710982_96711123_96721138
ENSMUSG00000043587.16_96706070_96722170_1	chr9	-	2032	4	ISM	ENSMUSG00000043587.16	ENSMUST00000119141.8	2768	7	49316	431	49296	-431	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATCTGACGTGGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	96722170	96706069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_96707676_96710982_96711123_96721138_96721266_96722011
ENSMUSG00000043587.16_96706280_96771473_1	chr9	-	2016	6	FSM	ENSMUSG00000043587.16	ENSMUST00000078478.8	2908	6	9	883	-7	-641	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGCTGTGCTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	96771473	96706279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_96707676_96710982_96711123_96721138_96721266_96722011_96722171_96738420_96738553_96771411
ENSMUSG00000043639.16_53665856_53853811_1	chr19	+	4773	14	FSM	ENSMUSG00000043639.16	ENSMUST00000164202.9	4892	14	119	0	119	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCATCAGCTTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	53665855	53853811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_53666024_53801678_53802772_53803946_53804009_53805576_53805669_53806353_53806452_53821076_53821221_53823078_53823211_53829409_53829490_53831653_53832276_53838532_53838620_53839607_53840248_53841934_53842067_53847822_53847945_53852510
ENSMUSG00000043659.12_24009292_24225151_1	chr9	+	1318	10	FSM	ENSMUSG00000043659.12	ENST00000360581.6	1335	10	17	0	17	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCTTTACCAGTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	24009291	24225151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_24009363_24009406_24009643_24046029_24046163_24165895_24166000_24198052_24198147_24201095_24201298_24211694_24211772_24221304_24221392_24224468_24224650_24225018
ENSMUSG00000043687.17_121335525_121361231_1	chr8	-	660	4	FSM	ENSMUSG00000043687.17	ENSMUST00000123927.9	844	4	0	184	0	15	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCCGGCTTGGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	121361231	121335524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_121335770_121337932_121338077_121355210_121355257_121361006
ENSMUSG00000043702.10_26387068_26387595_1	chr14	-	303	2	ISM	ENSMUSG00000043702.10	ENST00000487257.1	2273	3	3120	641	3120	-641	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGATCTCTATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	26387595	26387067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26387250_26387474
ENSMUSG00000043702.10_26387126_26389420_1	chr14	-	279	3	FSM	ENSMUSG00000043702.10	ENST00000487257.1	2273	3	1295	699	1295	-699	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTGGATACATTCGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	26389420	26387125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_26387250_26387474_26387612_26389402
ENSMUSG00000043702.10_26387196_26389466_1	chr14	-	255	3	FSM	ENSMUSG00000043702.10	ENST00000487257.1	2273	3	1249	769	1249	-769	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCAGGGTGGGAGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	26389466	26387195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_26387250_26387474_26387612_26389402
ENSMUSG00000043702.10_26387541_26389589_1	chr14	-	258	2	ISM	ENSMUSG00000043702.10	ENST00000487257.1	2273	3	1126	1114	1126	-1114	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAAAGGTAGGTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	26389589	26387540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26387612_26389402
ENSMUSG00000043702.10_26387582_26389649_1	chr14	-	277	2	ISM	ENSMUSG00000043702.10	ENST00000487257.1	2273	3	1066	1155	1066	-1155	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAAAGATATGTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	26389649	26387581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_26387612_26389402
ENSMUSG00000043716.14_16171519_16174886_1	chr1	-	1158	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	18213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	16174886	16171518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_16171584_16171950_16172156_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ENSMUSG00000043716.14_16171519_16174886_2	chr1	-	1162	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	18211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	16174886	16171518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_16171584_16171950_16172156_16172709_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ENSMUSG00000043716.14_16171519_16174886_3	chr1	-	1155	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	18138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	16174886	16171518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_16171584_16171950_16172161_16172721_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ENSMUSG00000043733.15_121271498_121275521_1	chr5	-	845	3	ISM	ENSMUSG00000043733.15	ENSMUST00000054547.9	5535	16	53871	2894	53871	-2894	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGTCAGGGCACTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	121275521	121271497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121272210_121272798_121272890_121275479
ENSMUSG00000043733.15_121271648_121281128_1	chr5	-	829	4	ISM	ENSMUSG00000043733.15	ENSMUST00000054547.9	5535	16	48264	3044	48264	-3044	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTCTGGCTGTGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	121281128	121271647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065
ENSMUSG00000043733.15_121271789_121281698_1	chr5	-	851	5	ISM	ENSMUSG00000043733.15	ENSMUST00000054547.9	5535	16	47694	3185	47694	-3185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCCACTGTTCATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	121281698	121271788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624
ENSMUSG00000043733.15_121271903_121282747_1	chr5	-	886	6	ISM	ENSMUSG00000043733.15	ENSMUST00000054547.9	5535	16	46645	3299	46645	-3299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACAGATCTGATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	121282747	121271902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624_121281693_121282592
ENSMUSG00000043733.15_121272142_121290317_1	chr5	-	822	8	ISM	ENSMUSG00000043733.15	ENSMUST00000100770.9	5599	16	39143	3546	39075	-3538	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCCGGCACTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	121290317	121272141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624_121281693_121282592_121282748_121287165_121287298_121290274
ENSMUSG00000043733.15_121272818_121290418_1	chr5	-	836	7	ISM	ENSMUSG00000043733.15	ENSMUST00000100770.9	5599	16	39042	4222	38974	-4214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGGCGACAGAACGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	121290418	121272817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121272890_121275479_121275593_121281065_121281218_121281624_121281693_121282592_121282748_121287165_121287298_121290274
ENSMUSG00000043733.15_121275480_121290617_1	chr5	-	859	7	ISM	ENSMUSG00000043733.15	ENSMUST00000100770.9	5599	16	38843	6884	38775	-6876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGCGATACGGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	121290617	121275479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121275593_121281065_121281218_121281624_121281693_121282592_121282748_121287165_121287298_121290274_121290434_121290537
ENSMUSG00000043733.15_121281113_121300831_1	chr5	-	856	8	ISM	ENSMUSG00000043733.15	ENSMUST00000100770.9	5599	16	28629	12517	28561	-12509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGCACTACATAGAGACG	NA	NA	NA	NA	NA	NA	NA	NA	121300831	121281112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121281218_121281624_121281693_121282592_121282748_121287165_121287298_121290274_121290434_121290537_121290618_121292492_121292590_121300771
ENSMUSG00000043733.15_121282688_121302638_1	chr5	-	840	8	ISM	ENSMUSG00000043733.15	ENSMUST00000100770.9	5599	16	26822	14092	26754	-14084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGACCCTGGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	121302638	121282687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121282748_121287165_121287298_121290274_121290434_121290537_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557
ENSMUSG00000043733.15_121287267_121302750_1	chr5	-	791	7	ISM	ENSMUSG00000043733.15	ENSMUST00000054547.9	5535	16	26642	18663	26642	-18663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCGCTCAAAGAATACGGG	NA	NA	NA	NA	NA	NA	NA	NA	121302750	121287266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121287298_121290274_121290434_121290537_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557
ENSMUSG00000043733.15_121290304_121305998_1	chr5	-	818	7	ISM	ENSMUSG00000043733.15	ENSMUST00000054547.9	5535	16	23394	21700	23394	-21700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACCACAAAGGAAGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	121305998	121290303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121290434_121290537_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557_121302751_121305911
ENSMUSG00000043733.15_121290570_121310125_1	chr5	-	846	7	ISM	ENSMUSG00000043733.15	ENSMUST00000054547.9	5535	16	19267	21966	19267	-21966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGATTACATTAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	121310125	121290569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557_121302751_121305911_121306107_121310043
ENSMUSG00000043733.15_121300781_121329392_1	chr5	-	861	6	ISM	ENSMUSG00000043733.15	ENSMUST00000054547.9	5535	16	0	32177	0	-32177	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGAGGTAAGTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	121329392	121300780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_121300886_121301200_121301318_121302557_121302751_121305911_121306107_121310043_121310167_121329264
ENSMUSG00000043822.19_80176675_80177698_1	chr10	-	810	3	ISM	ENSMUSG00000043822.19	ENSMUST00000095446.10	1957	13	6548	0	6548	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATCCCTCGCCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	80177698	80176674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80177291_80177422_80177495_80177576
ENSMUSG00000043822.19_80176828_80177936_1	chr10	-	778	4	ISM	ENSMUSG00000043822.19	ENSMUST00000095446.10	1957	13	6310	153	6310	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTCTGCAGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	80177936	80176827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80177291_80177422_80177495_80177576_80177776_80177892
ENSMUSG00000043822.19_80177153_80179451_1	chr10	-	791	7	ISM	ENSMUSG00000043822.19	ENSMUST00000095446.10	1957	13	4795	478	4795	-478	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACTGGCCCCACACCGA	NA	NA	NA	NA	NA	NA	NA	NA	80179451	80177152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80177291_80177422_80177495_80177576_80177776_80177892_80178057_80178140_80178228_80178742_80178855_80179432
ENSMUSG00000043822.19_80177231_80179497_1	chr10	-	759	7	ISM	ENSMUSG00000043822.19	ENSMUST00000095446.10	1957	13	4749	556	4749	-556	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCTTGCTCATCTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	80179497	80177230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80177291_80177422_80177495_80177576_80177776_80177892_80178057_80178140_80178228_80178742_80178855_80179432
ENSMUSG00000043822.19_80177743_80181221_1	chr10	-	760	8	ISM	ENSMUSG00000043822.19	ENSMUST00000095446.10	1957	13	3025	1068	3025	830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGAGTTCTGGCTGCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	80181221	80177742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80177776_80177892_80178057_80178140_80178228_80178742_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181155
ENSMUSG00000043822.19_80177960_80181422_1	chr10	-	762	8	ISM	ENSMUSG00000043822.19	ENSMUST00000095446.10	1957	13	2824	1285	2824	613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGAGTGCGGGCCCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	80181422	80177959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80178057_80178140_80178228_80178742_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181155_80181248_80181346
ENSMUSG00000043822.19_80178009_80181474_1	chr10	-	765	8	ISM	ENSMUSG00000043822.19	ENSMUST00000095446.10	1957	13	2772	1334	2772	564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCCGCCTGGCACCTAC	NA	NA	NA	NA	NA	NA	NA	NA	80181474	80178008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80178057_80178140_80178228_80178742_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181155_80181248_80181346
ENSMUSG00000043822.19_80178141_80183459_1	chr10	-	849	8	ISM	ENSMUSG00000043822.19	ENSMUST00000095446.10	1957	13	787	1466	787	432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCTCGGGGCCCCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	80183459	80178140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80178228_80178742_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181155_80181248_80181346_80181538_80183390
ENSMUSG00000043822.19_80178573_80181430_1	chr10	-	756	6	ISM	ENSMUSG00000043822.19	ENSMUST00000105352.2	989	8	2816	0	2816	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCCTCCCCTCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	80181430	80178572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181155_80181248_80181346
ENSMUSG00000043822.19_80178573_80181537_1	chr10	-	863	6	ISM	ENSMUSG00000043822.19	ENSMUST00000105352.2	989	8	2709	0	2709	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCCTCCCCTCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	80181537	80178572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181155_80181248_80181346
ENSMUSG00000043822.19_80178740_80184246_1	chr10	-	822	8	FSM	ENSMUSG00000043822.19	ENSMUST00000105352.2	989	8	0	167	0	-167	multi-exon	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCCCATTCTGACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	80184246	80178739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181155_80181248_80181346_80181538_80183390_80183460_80184189
ENSMUSG00000043850.16_58753604_58792377_1	chr3	-	649	3	FSM	ENSMUSG00000043850.16	ENST00000328863.8	730	3	84	-3	84	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATATCTTCATAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	58792377	58753603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_58753873_58772361_58772573_58792208
ENSMUSG00000043872.15_126945148_126953389_1	chr4	-	572	4	ISM	ENSMUSG00000043872.15	ENSMUST00000106099.8	2982	8	1528	3713	-610	-3713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGACTTGGGGAACGTAG	NA	NA	NA	NA	NA	NA	NA	NA	126953389	126945147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126945219_126948000_126948176_126952585_126952825_126953302
ENSMUSG00000043897.14_64023853_64044901_1	chr3	-	1497	4	FSM	ENSMUSG00000043897.14	ENST00000449668.1	1510	4	17	-4	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGAGCTCCATGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	64044901	64023852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_64024836_64026176_64026294_64042073_64042195_64044625
ENSMUSG00000043897.14_64023853_64044901_2	chr3	-	1490	4	NNC	ENSMUSG00000043897.14	novel	1510	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGAGCTCCATGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	64044901	64023852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_64024829_64026176_64026294_64042073_64042195_64044625
ENSMUSG00000043897.14_64023853_64044901_3	chr3	-	1491	4	NNC	ENSMUSG00000043897.14	novel	2484	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGAGCTCCATGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	64044901	64023852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_64024836_64026176_64026288_64042073_64042195_64044625
ENSMUSG00000043913.15_116269083_116274511_1	chr5	-	445	3	ISM	ENSMUSG00000043913.15	ENST00000327554.3	1917	13	152464	0	152464	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGAGCACCCCCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	116274511	116269082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_116269273_116272086_116272219_116274388
ENSMUSG00000043913.15_116269227_116278878_1	chr5	-	405	5	ISM	ENSMUSG00000043913.15	ENST00000327554.3	1917	13	148097	144	148097	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCCTGCCAAAAAGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	116278878	116269226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_116269273_116272086_116272219_116274388_116274512_116275090_116275154_116278837
ENSMUSG00000043913.15_116272183_116295572_1	chr5	-	409	6	ISM	ENSMUSG00000043913.15	ENSMUST00000050178.13	3522	14	131472	9483	131403	-3100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTCACCTCGAACT	NA	NA	NA	NA	NA	NA	NA	NA	116295572	116272182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_116272219_116274388_116274512_116275090_116275154_116278837_116278910_116284180_116284266_116295542
ENSMUSG00000043913.15_116274483_116295705_1	chr5	-	412	5	ISM	ENSMUSG00000043913.15	ENSMUST00000050178.13	3522	14	131339	11783	131270	-5400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCGGGGTGTGTAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	116295705	116274482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_116274512_116275090_116275154_116278837_116278910_116284180_116284266_116295542
ENSMUSG00000043913.15_116295639_116318935_1	chr5	-	396	4	ISM	ENSMUSG00000043913.15	ENST00000327554.3	1917	13	108040	26556	108040	11645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGAACCCCGGCTCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	116318935	116295638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_116295763_116301541_116301633_116310500_116310609_116318862
ENSMUSG00000043913.15_116310500_116363410_1	chr5	-	471	4	ISM	ENSMUSG00000043913.15	ENSMUST00000086483.4	2168	6	63612	3216	63565	-3216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCCAGTAGCCCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	116363410	116310499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_116310609_116318862_116318971_116328118_116328290_116363327
ENSMUSG00000043913.15_116318898_116426594_1	chr5	-	416	4	ISM	ENSMUSG00000043913.15	ENSMUST00000086483.4	2168	6	428	11614	381	-11614	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCATGGCGCCCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	116426594	116318897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_116318971_116328118_116328290_116363327_116363411_116426505
ENSMUSG00000043913.15_116328250_116426792_1	chr5	-	410	3	ISM	ENSMUSG00000043913.15	ENSMUST00000086483.4	2168	6	230	20966	183	-20966	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATCCTGCGAGAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	116426792	116328249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_116328290_116363327_116363411_116426505
ENSMUSG00000043913.15_116363344_116426860_1	chr5	-	419	2	ISM	ENSMUSG00000043913.15	ENST00000327554.3	1917	13	115	94261	115	-56060	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATGCGAAGCCGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	116426860	116363343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_116363408_116426505
ENSMUSG00000043923.9_44321458_44329476_1	chr9	-	1333	11	FSM	ENSMUSG00000043923.9	ENSMUST00000053286.9	1725	11	390	2	-140	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCTGATTGAACCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	44329476	44321457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324320_44324433_44324499_44324767_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ENSMUSG00000043923.9_44321610_44329582_1	chr9	-	1287	11	FSM	ENSMUSG00000043923.9	ENSMUST00000053286.9	1725	11	284	154	-246	-154	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTGAAGGTTCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	44329582	44321609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324320_44324433_44324499_44324767_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ENSMUSG00000043923.9_44321875_44329866_1	chr9	-	1389	10	ISM	ENSMUSG00000043923.9	ENSMUST00000053286.9	1725	11	0	419	0	-419	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAACTGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	44329866	44321874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44321878_44321987_44322078_44323749_44323781_44324213_44324320_44324433_44324499_44324767_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ENSMUSG00000043962.17_126059066_126069247_1	chr4	-	1077	6	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	18941	-1	18941	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	957	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATCCCACGACAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	126069247	126059065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128
ENSMUSG00000043962.17_126059348_126071686_1	chr4	-	993	8	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	16502	281	16502	-281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCGGGGGCGGGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	126071686	126059347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654
ENSMUSG00000043962.17_126060841_126071817_1	chr4	-	944	7	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	16371	1774	16371	-1774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGAGGAAACTATTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	126071817	126060840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654
ENSMUSG00000043962.17_126060841_126071866_1	chr4	-	993	7	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	16322	1774	16322	-1774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGAGGAAACTATTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	126071866	126060840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654
ENSMUSG00000043962.17_126065525_126072110_1	chr4	-	976	5	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	16078	6458	16078	1111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACAGAGAAAACCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	126072110	126065524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654
ENSMUSG00000043962.17_126067236_126072350_1	chr4	-	1067	4	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	15838	8169	15838	-600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGTTGCTTTGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	126072350	126067235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126067322_126069128_126069241_126069976_126070150_126071654
ENSMUSG00000043962.17_126069159_126073764_1	chr4	-	1011	4	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	14424	10092	14424	-2523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATAAGAAAAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	126073764	126069158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126069241_126069976_126070150_126071654_126072351_126073704
ENSMUSG00000043962.17_126070019_126073940_1	chr4	-	1063	3	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	14248	10952	14248	-3383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGCTCAGCACATAGTG	NA	NA	NA	NA	NA	NA	NA	NA	126073940	126070018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126070150_126071654_126072351_126073704
ENSMUSG00000043962.17_126072089_126074423_1	chr4	-	981	2	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	13765	13022	13765	-5453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAGGGAAGGAAGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	126074423	126072088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126072351_126073704
ENSMUSG00000043962.17_126072305_126080283_1	chr4	-	1005	3	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	7905	13238	7905	-5669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAACAAATGCCGATAA	NA	NA	NA	NA	NA	NA	NA	NA	126080283	126072304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126072351_126073704_126074608_126080227
ENSMUSG00000043962.17_126073752_126088184_1	chr4	-	1085	3	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	4	14685	4	-7116	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAAGAGGAGAGTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	126088184	126073751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126074608_126080227_126080382_126088109
ENSMUSG00000043962.17_126073804_126088184_1	chr4	-	1033	3	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	4	14737	4	-7168	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCTGTGGGTAAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	126088184	126073803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_126074608_126080227_126080382_126088109
ENSMUSG00000043964.15_127368987_127373452_1	chr7	+	1126	2	FSM	ENSMUSG00000043964.15	ENSMUST00000061587.13	1996	2	0	870	0	-412	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTCCTGTAAGCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	127368986	127373452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_127369389_127372728
ENSMUSG00000043964.15_127369111_127373526_1	chr7	+	1221	3	FSM	ENSMUSG00000043964.15	ENSMUST00000121504.2	2141	3	124	796	124	-338	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATCATGTTCTGGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	127369110	127373526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_127369389_127369905_127370051_127372728
ENSMUSG00000043964.15_127369194_127373608_1	chr7	+	1075	2	FSM	ENSMUSG00000043964.15	ENSMUST00000061587.13	1996	2	207	714	207	-256	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGAGGCCCGCCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	127369193	127373608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_127369389_127372728
ENSMUSG00000043964.15_127369250_127373676_1	chr7	+	1087	2	FSM	ENSMUSG00000043964.15	ENSMUST00000061587.13	1996	2	263	646	263	-188	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATGTCTGCACAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	127369249	127373676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_127369389_127372728
ENSMUSG00000043969.5_59447283_59453789_1	chr19	+	2252	2	FSM	ENSMUSG00000043969.5	ENST00000442245.5	2650	2	399	-1	399	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGTTGTCTTGGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	59447282	59453789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_59448057_59452311
ENSMUSG00000043999.7_30835416_30841869_1	chr11	+	1012	2	FSM	ENSMUSG00000043999.7	ENST00000394705.3	1864	2	2	850	2	-850	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAATGGAGATCCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	30835415	30841869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_30835547_30840988
ENSMUSG00000044005.14_128030506_128036835_1	chr10	+	352	2	ISM	ENSMUSG00000044005.14	ENST00000610413.4	2049	15	13	8968	13	-8968	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATGCTGGGTGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	128030505	128036835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128030777_128036754
ENSMUSG00000044005.14_128030506_128045808_1	chr10	+	2257	17	NNC	ENSMUSG00000044005.14	novel	2573	18	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATTTTTATTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	128030505	128045808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128030777_128035050_128035151_128035505_128035628_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043435_128043492_128044459_128044537_128044974_128045039_128045156
ENSMUSG00000044005.14_128030506_128045808_2	chr10	+	2257	16	NNC	ENSMUSG00000044005.14	novel	2573	18	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATTTTTATTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	128030505	128045808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128030777_128035050_128035151_128035505_128035628_128036754_128036835_128037074_128037239_128037427_128037514_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ENSMUSG00000044005.14_128030506_128045808_3	chr10	+	2256	17	NNC	ENSMUSG00000044005.14	novel	2573	18	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATTTTTATTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	128030505	128045808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_128030777_128035050_128035151_128035505_128035628_128036761_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ENSMUSG00000044005.14_128030675_128037203_1	chr10	+	311	3	ISM	ENSMUSG00000044005.14	ENST00000610413.4	2049	15	182	8600	182	-8600	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCGCTATAACAAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	128030674	128037203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_128030777_128036754_128036835_128037074
ENSMUSG00000044005.14_128034999_128045808_1	chr10	+	2107	16	FSM	ENSMUSG00000044005.14	ENST00000539272.5	2107	16	5	-5	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATTTTTATTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	128034998	128045808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ENSMUSG00000044017.17_129186656_129278614_1	chr5	+	2402	21	NNC	ENSMUSG00000044017.17	novel	2524	22	NA	NA	17	14	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	744	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCAGATTAGACCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	129186655	129278614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_129186726_129192118_129192242_129199474_129199655_129205917_129206173_129209721_129209932_129213998_129214059_129216651_129216770_129217798_129217909_129219523_129219600_129221030_129221173_129239658_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519
ENSMUSG00000044017.17_129186656_129278614_2	chr5	+	2394	20	NNC	ENSMUSG00000044017.17	novel	2524	22	NA	NA	17	14	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCAGATTAGACCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	129186655	129278614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_129186726_129192118_129192242_129199474_129199655_129205917_129206173_129209721_129209932_129213998_129214059_129216651_129216770_129217797_129217909_129219523_129219600_129221030_129221173_129239658_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278486
ENSMUSG00000044017.17_129186656_129278614_3	chr5	+	2403	21	NIC	ENSMUSG00000044017.17	novel	2524	22	NA	NA	17	14	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	923	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCAGATTAGACCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	129186655	129278614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_+_129186726_129192118_129192242_129199474_129199655_129205917_129206173_129209721_129209932_129213998_129214059_129216651_129216770_129217797_129217909_129219523_129219600_129221030_129221173_129239658_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519
ENSMUSG00000044017.17_129186656_129278614_4	chr5	+	2402	21	NNC	ENSMUSG00000044017.17	novel	2524	22	NA	NA	17	14	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	565	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCAGATTAGACCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	129186655	129278614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_129186726_129192118_129192242_129199474_129199655_129205917_129206173_129209721_129209932_129213998_129214059_129216651_129216770_129217797_129217909_129219524_129219600_129221030_129221173_129239658_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519
ENSMUSG00000044017.17_129186656_129279629_1	chr5	+	2503	22	NIC	ENSMUSG00000044017.17	novel	2524	22	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2875	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCTCTGTTCAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	129186655	129279629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_+_129186726_129192118_129192242_129199474_129199655_129205917_129206173_129209721_129209932_129213998_129214059_129216651_129216770_129217797_129217909_129219523_129219600_129221030_129221173_129239658_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
ENSMUSG00000044017.17_129192117_129279629_2	chr5	+	2430	21	NNC	ENSMUSG00000044017.17	novel	2524	22	NA	NA	5478	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1235	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCTCTGTTCAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	129192116	129279629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_129192242_129199474_129199655_129205917_129206173_129209721_129209932_129213998_129214059_129216651_129216770_129217797_129217909_129219523_129219600_129221030_129221173_129239658_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278524_129278613_129279527
ENSMUSG00000044017.17_129192117_129279629_3	chr5	+	2428	21	NNC	ENSMUSG00000044017.17	novel	2524	22	NA	NA	5478	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCTCTGTTCAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	129192116	129279629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_129192242_129199474_129199655_129205917_129206173_129209721_129209932_129213998_129214059_129216651_129216770_129217797_129217909_129219523_129219600_129221030_129221173_129239658_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265450_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
ENSMUSG00000044017.17_129192117_129279629_4	chr5	+	2435	21	NIC	ENSMUSG00000044017.17	novel	2524	22	NA	NA	5478	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCTCTGTTCAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	129192116	129279629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_+_129192242_129199474_129199655_129205917_129206173_129209721_129209932_129213998_129214059_129216651_129216770_129217797_129217909_129219523_129219600_129221030_129221173_129239658_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
ENSMUSG00000044017.17_129192117_129279629_5	chr5	+	2434	21	NNC	ENSMUSG00000044017.17	novel	2524	22	NA	NA	5478	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1525	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCTCTGTTCAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	129192116	129279629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_129192242_129199474_129199655_129205917_129206173_129209721_129209932_129213999_129214059_129216651_129216770_129217797_129217909_129219523_129219600_129221030_129221173_129239658_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
ENSMUSG00000044017.17_129199474_129279629_1	chr5	+	2315	20	ISM	ENSMUSG00000044017.17	ENST00000261654.10	2524	22	12835	0	12835	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCTCTGTTCAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	129199473	129279629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_129199655_129205917_129206177_129209721_129209932_129213998_129214059_129216651_129216770_129217797_129217909_129219523_129219600_129221030_129221173_129239658_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
ENSMUSG00000044017.17_129199474_129279629_2	chr5	+	2306	19	NNC	ENSMUSG00000044017.17	novel	2524	22	NA	NA	12835	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCTCTGTTCAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	129199473	129279629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_129199655_129205917_129206177_129209721_129209932_129213998_129214059_129216651_129216770_129217797_129217909_129219523_129219600_129221030_129221173_129239658_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278486_129278613_129279527
ENSMUSG00000044024.17_38088309_38091222_1	chr18	+	1129	5	NIC	ENSMUSG00000044024.17	novel	1995	6	NA	NA	61	-376	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGCTCCCTGAGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	38088308	38091222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr18_+_38088963_38089981_38090048_38090141_38090209_38090641_38090828_38091066
ENSMUSG00000044024.17_38088423_38091360_1	chr18	+	1160	5	ISM	ENSMUSG00000044024.17	ENSMUST00000163591.9	1057	6	-219	238	175	-238	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGGGAGAGACCCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	38088422	38091360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_38088970_38089981_38090048_38090141_38090209_38090641_38090828_38091066
ENSMUSG00000044024.17_38088793_38092040_1	chr18	+	1087	6	NNC	ENSMUSG00000044024.17	novel	1773	6	NA	NA	116	-133	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCCAAAACCTCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	38088792	38092040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_38088970_38089981_38090048_38090141_38090209_38090641_38090828_38091066_38091435_38091817
ENSMUSG00000044024.17_38088867_38092174_1	chr18	+	1155	6	FSM	ENSMUSG00000044024.17	ENST00000521367.5	1773	6	619	-1	190	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATACCCTTTATTCACT	NA	NA	NA	NA	NA	NA	NA	NA	38088866	38092174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_38088970_38089981_38090048_38090141_38090209_38090641_38090828_38091066_38091443_38091817
ENSMUSG00000044041.5_100009592_100010561_1	chr11	-	590	4	ISM	ENSMUSG00000044041.5	ENSMUST00000007275.3	1654	8	1831	1439	1831	-1439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCGCAGCCTGCTAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	100010561	100009591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100009780_100009869_100009996_100010106_100010269_100010447
ENSMUSG00000044041.5_100009709_100010861_1	chr11	-	579	5	ISM	ENSMUSG00000044041.5	ENSMUST00000007275.3	1654	8	1531	1556	1531	-1556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATCAGCAGCATCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	100010861	100009708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100009780_100009869_100009996_100010106_100010269_100010447_100010605_100010798
ENSMUSG00000044041.5_100010170_100012123_1	chr11	-	612	4	ISM	ENSMUSG00000044041.5	ENSMUST00000007275.3	1654	8	269	2017	269	-2017	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGTATGAAGCCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	100012123	100010169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100010269_100010447_100010605_100010798_100010882_100011850
ENSMUSG00000044080.10_90418516_90421585_1	chr3	-	388	3	FSM	ENSMUSG00000044080.10	ENSMUST00000060738.9	677	3	114	175	0	-172	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGCCCTTCCTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	90421585	90418515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_90418672_90419302_90419457_90421507
ENSMUSG00000044080.10_90419301_90421699_1	chr3	-	348	2	ISM	ENSMUSG00000044080.10	ENSMUST00000060738.9	677	3	0	960	0	-957	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCACAGGATTGAGGTACA	NA	NA	NA	NA	NA	NA	NA	NA	90421699	90419300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_90419457_90421507
ENSMUSG00000044148.7_12521460_12524162_1	chrX	-	1328	2	ISM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	15745	342	15622	-342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAGGCATCTAAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	12524162	12521459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_12522726_12524100
ENSMUSG00000044148.7_12521631_12528940_1	chrX	-	1310	3	ISM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	10967	513	10844	-513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATTGAGAAAATGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	12528940	12521630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_12522726_12524100_12524264_12528888
ENSMUSG00000044148.7_12521687_12528992_1	chrX	-	1306	3	ISM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	10915	569	10792	-569	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGACTACCAGCCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	12528992	12521686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_12522726_12524100_12524264_12528888
ENSMUSG00000044148.7_12521886_12535815_1	chrX	-	1383	5	ISM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	4092	768	3969	-768	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAACATCGTGACCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	12535815	12521885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765
ENSMUSG00000044148.7_12521969_12535839_1	chrX	-	1324	5	ISM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	4068	851	3945	-851	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCACAAGTTGAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	12535839	12521968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765
ENSMUSG00000044148.7_12522085_12539312_1	chrX	-	1302	6	ISM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	595	967	472	-967	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGAAAAGGCAAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	12539312	12522084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264
ENSMUSG00000044148.7_12522140_12539363_1	chrX	-	1298	6	ISM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	544	1022	421	-1022	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGTTCAGAGGTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	12539363	12522139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264
ENSMUSG00000044148.7_12522326_12539726_1	chrX	-	1310	7	FSM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	181	1208	58	-1208	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTGATGCACTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	12539726	12522325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
ENSMUSG00000044148.7_12522405_12539907_1	chrX	-	1412	7	FSM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	0	1287	0	-1287	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGATTTTGCATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	12539907	12522404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
ENSMUSG00000044148.7_12528889_12539782_1	chrX	-	1011	4	FSM	ENSMUSG00000044148.7	ENST00000378426.5	1013	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGGGATGAAGTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	12539782	12528888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_12529069_12530738_12530889_12535765_12535929_12539264
ENSMUSG00000044155.12_18848578_18853922_1	chr6	+	677	4	FSM	ENSMUSG00000044155.12	ENSMUST00000056398.11	807	4	0	130	0	-130	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAACTTAGAAAATACCA	NA	NA	NA	NA	NA	NA	NA	NA	18848577	18853922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_18848763_18849624_18849666_18851634_18851763_18853599
ENSMUSG00000044155.12_18849625_18854052_1	chr6	+	622	3	ISM	ENSMUSG00000044155.12	ENSMUST00000056398.11	807	4	1047	0	958	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCTTTTCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	18849624	18854052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_18849666_18851634_18851763_18853599
ENSMUSG00000044197.9_139366336_139379162_1	chr5	+	1153	2	FSM	ENSMUSG00000044197.9	ENST00000444847.2	1514	2	-54	415	0	-415	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCTCGGGGATACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	139366335	139379162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_139366503_139378176
ENSMUSG00000044201.11_34866050_34884452_2	chr18	-	1807	15	FSM	ENSMUSG00000044201.11	ENSMUST00000060710.9	1945	15	134	4	134	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTCTAGATGTCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	34884452	34866049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ENSMUSG00000044217.18_99488730_99492710_1	chr15	+	1725	4	FSM	ENSMUSG00000044217.18	ENSMUST00000229728.2	1415	4	-302	-8	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATCTCCCTCCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	99488729	99492710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_99489516_99490547_99490708_99491126_99491211_99492015
ENSMUSG00000044221.15_88807307_88824030_1	chr5	-	2531	10	NNC	ENSMUSG00000044221.15	novel	2538	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTATATTTTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	88824030	88807306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820613_88821551_88821709_88823616
ENSMUSG00000044221.15_88807307_88824030_2	chr5	-	2531	10	NNC	ENSMUSG00000044221.15	novel	2538	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTATATTTTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	88824030	88807306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820470_88820620_88821551_88821709_88823616
ENSMUSG00000044221.15_88807307_88824030_3	chr5	-	2533	10	NNC	ENSMUSG00000044221.15	novel	2538	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTATATTTTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	88824030	88807306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823621
ENSMUSG00000044221.15_88807307_88824030_4	chr5	-	2531	10	NNC	ENSMUSG00000044221.15	novel	2538	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTATATTTTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	88824030	88807306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_88808319_88810393_88810463_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
ENSMUSG00000044221.15_88807307_88824030_5	chr5	-	2531	10	NNC	ENSMUSG00000044221.15	novel	2538	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTATATTTTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	88824030	88807306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_88808312_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
ENSMUSG00000044221.15_88807307_88824030_6	chr5	-	2530	10	NNC	ENSMUSG00000044221.15	novel	2538	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTATATTTTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	88824030	88807306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813793_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
ENSMUSG00000044224.17_10446852_10462335_1	chr15	-	1607	10	ISM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	8267	10	8267	-10	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACATGTGCCTTTCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	10462335	10446851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308
ENSMUSG00000044224.17_10446997_10462367_1	chr15	-	1494	10	ISM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	8235	155	8235	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTAAACATTTCACTAG	NA	NA	NA	NA	NA	NA	NA	NA	10462367	10446996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308
ENSMUSG00000044224.17_10447188_10470384_1	chr15	-	1496	12	FSM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	218	346	218	-346	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTAGGAACAAGAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	10470384	10447187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ENSMUSG00000044224.17_10447290_10470602_1	chr15	-	1612	12	FSM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	0	448	0	-448	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGCCACAGTGAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	10470602	10447289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ENSMUSG00000044254.7_106299714_106304760_1	chr4	-	1608	5	ISM	ENSMUSG00000044254.7	ENSMUST00000049507.6	3521	12	16766	188	16766	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTACCAAGGCCACACCA	NA	NA	NA	NA	NA	NA	NA	NA	106304760	106299713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106300756_106301873_106302056_106303792_106303971_106304326_106304476_106304703
ENSMUSG00000044254.7_106300647_106316065_1	chr4	-	1605	11	ISM	ENSMUSG00000044254.7	ENSMUST00000049507.6	3521	12	5461	1121	5461	-1121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGACACTGCCAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	106316065	106300646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106300756_106301873_106302056_106303792_106303971_106304326_106304476_106304703_106304878_106306056_106306241_106307236_106307434_106311421_106311564_106311709_106311844_106314061_106314186_106316033
ENSMUSG00000044254.7_106303845_106321071_1	chr4	-	1602	10	ISM	ENSMUSG00000044254.7	ENSMUST00000049507.6	3521	12	455	4319	455	-4319	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCCTGGAGACCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	106321071	106303844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106303971_106304326_106304476_106304703_106304878_106306056_106306241_106307236_106307434_106311421_106311564_106311709_106311844_106314061_106314186_106316033_106316226_106320891
ENSMUSG00000044254.7_106304737_106321377_1	chr4	-	1600	8	ISM	ENSMUSG00000044254.7	ENSMUST00000049507.6	3521	12	149	5211	149	-5211	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCACACTGCCCCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	106321377	106304736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106304878_106306056_106306241_106307236_106307434_106311421_106311564_106311709_106311844_106314061_106314186_106316033_106316226_106320891
ENSMUSG00000044258.11_61081969_61084311_1	chr13	-	1245	5	FSM	ENSMUSG00000044258.11	ENSMUST00000021880.10	1373	5	128	0	128	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCCTAAATTGTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	61084311	61081968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_61082843_61083143_61083267_61083360_61083484_61083771_61083890_61084304
ENSMUSG00000044285.9_46321485_46322457_1	chr14	+	517	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	99	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	46321484	46322457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_46321748_46322203
ENSMUSG00000044285.9_46321712_46322457_1	chr14	+	519	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	127	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	46321711	46322457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_46321976_46322202
ENSMUSG00000044285.9_46321712_46322457_10	chr14	+	511	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	127	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	46321711	46322457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_46321797_46322031
ENSMUSG00000044285.9_46321712_46322457_11	chr14	+	518	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	127	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	866	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	46321711	46322457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_46321859_46322086
ENSMUSG00000044285.9_46321712_46322457_12	chr14	+	517	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	127	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	729	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	46321711	46322457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_46321774_46322002
ENSMUSG00000044285.9_46321712_46322457_2	chr14	+	512	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	127	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	861	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	46321711	46322457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_46321859_46322092
ENSMUSG00000044285.9_46321712_46322457_3	chr14	+	521	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	127	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	46321711	46322457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_46321886_46322110
ENSMUSG00000044285.9_46321712_46322457_4	chr14	+	519	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	127	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	46321711	46322457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_46321853_46322079
ENSMUSG00000044285.9_46321712_46322457_5	chr14	+	513	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	127	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	46321711	46322457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_46321923_46322155
ENSMUSG00000044285.9_46321712_46322457_6	chr14	+	518	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	127	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	46321711	46322457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_46321787_46322014
ENSMUSG00000044285.9_46321712_46322457_7	chr14	+	513	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	127	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	46321711	46322457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_46321832_46322064
ENSMUSG00000044285.9_46321712_46322457_8	chr14	+	512	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	127	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	46321711	46322457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_46321886_46322119
ENSMUSG00000044285.9_46321712_46322457_9	chr14	+	517	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	127	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	46321711	46322457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_46321869_46322097
ENSMUSG00000044328.14_77398925_77399715_1	chr11	-	712	2	ISM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	4481	0	4481	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTTGGGAGATTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	77399715	77398924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_77399204_77399282
ENSMUSG00000044328.14_77399070_77399950_1	chr11	-	718	3	ISM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	4246	145	4246	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGCCACGTGGGCCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	77399950	77399069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_77399204_77399282_77399818_77399901
ENSMUSG00000044328.14_77399130_77399996_1	chr11	-	704	3	ISM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	4200	205	4200	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCGGATAGTGGCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	77399996	77399129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_77399204_77399282_77399818_77399901
ENSMUSG00000044328.14_77399283_77400458_1	chr11	-	768	3	ISM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	3738	358	3738	-358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAAGAGCCCCCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	77400458	77399282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_77399818_77399901_77400100_77400423
ENSMUSG00000044328.14_77399796_77404196_1	chr11	-	671	6	ISM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	0	871	0	-871	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGAGCTGGCGACCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	77404196	77399795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403722_77403792_77403985
ENSMUSG00000044345.10_42136405_42139901_1	chr19	+	2259	2	FSM	ENSMUSG00000044345.10	ENSMUST00000061111.10	3066	2	566	241	566	-241	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTCTCTGACACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	42136404	42139901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_42137999_42139236
ENSMUSG00000044345.10_42136642_42140142_1	chr19	+	2263	2	FSM	ENSMUSG00000044345.10	ENSMUST00000061111.10	3066	2	803	0	803	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGTCTCACGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	42136641	42140142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_42137999_42139236
ENSMUSG00000044350.15_77266963_77270761_1	chr14	-	630	3	FSM	ENSMUSG00000044350.15	ENST00000627615.1	629	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTCTCTGCTGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	77270761	77266962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_77267227_77268172_77268403_77270625
ENSMUSG00000044408.8_54692882_54703305_1	chr12	-	588	2	FSM	ENSMUSG00000044408.8	ENSMUST00000056228.8	1346	2	53	705	53	-705	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAATTGCCTTCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	54703305	54692881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_54693321_54703156
ENSMUSG00000044475.15_59848299_59900230_1	chr10	+	610	5	ISM	ENSMUSG00000044475.15	ENST00000672940.1	771	6	20	33825	20	-33825	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTATGATGTCGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	59848298	59900230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59848382_59849417_59849597_59877942_59878080_59898281_59898407_59900144
ENSMUSG00000044475.15_59848332_59933951_1	chr10	+	614	6	FSM	ENSMUSG00000044475.15	ENST00000672940.1	771	6	53	104	53	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	2839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTATTCACATCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	59848331	59933951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_59848382_59849417_59849597_59877942_59878080_59898281_59898407_59900144_59900231_59933914
ENSMUSG00000044475.15_59849474_59934055_1	chr10	+	606	5	NNC	ENSMUSG00000044475.15	novel	771	6	NA	NA	1195	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATGGCTTCCTAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	59849473	59934055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_59849597_59877942_59878080_59898281_59898407_59900150_59900231_59933914
ENSMUSG00000044475.15_59849474_59934055_2	chr10	+	612	5	ISM	ENSMUSG00000044475.15	ENST00000672940.1	771	6	1195	0	1195	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATGGCTTCCTAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	59849473	59934055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59849597_59877942_59878080_59898281_59898407_59900144_59900231_59933914
ENSMUSG00000044475.15_59877990_59933986_1	chr10	+	287	3	ISM	ENSMUSG00000044475.15	ENST00000317168.11	685	5	29711	69	29711	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTGGAAACTATGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	59877989	59933986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_59878080_59898281_59898407_59933914
ENSMUSG00000044477.13_30223707_30428388_1	chr17	+	2431	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	0	608	0	-606	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACATCTGCATTGAACACA	NA	NA	NA	NA	NA	NA	NA	NA	30223706	30428388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
ENSMUSG00000044477.13_30354296_30428996_1	chr17	+	2423	4	ISM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	130589	0	130258	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGATTGTCTGTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	30354295	30428996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_30354480_30372276_30372343_30411536_30411705_30426991
ENSMUSG00000044496.7_148025588_148029381_1	chr4	+	1244	2	ISM	ENSMUSG00000044496.7	ENSMUST00000103232.2	2731	3	236	2390	236	-2390	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGGCATGGTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	148025587	148029381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148026515_148029064
ENSMUSG00000044496.7_148026033_148029826_1	chr4	+	1244	2	ISM	ENSMUSG00000044496.7	ENSMUST00000103232.2	2731	3	681	1945	681	-1945	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCTCATCACCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	148026032	148029826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_148026515_148029064
ENSMUSG00000044502.17_31615181_31616837_1	chr11	-	788	2	ISM	ENSMUSG00000044502.17	ENSMUST00000058060.14	1394	4	5048	0	4890	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGACGATCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	31616837	31615180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_31615868_31616736
ENSMUSG00000044502.17_31615443_31619368_1	chr11	-	747	3	ISM	ENSMUSG00000044502.17	ENSMUST00000058060.14	1394	4	2517	262	2359	-262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCGTGTGGCAGTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	31619368	31615442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_31615868_31616736_31616934_31619243
ENSMUSG00000044533.16_24939084_24940694_1	chr17	+	833	5	ISM	ENSMUSG00000044533.16	ENSMUST00000170715.8	998	6	47	206	0	-205	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCGGTTGGTGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	24939083	24940694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_24939107_24939246_24939427_24939507_24939706_24939942_24940277_24940596
ENSMUSG00000044533.16_24939084_24940904_2	chr17	+	1090	5	NNC	ENSMUSG00000044533.16	novel	1094	5	NA	NA	0	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	11533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTGTCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	24939083	24940904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_24939427_24939507_24939706_24939942_24940277_24940601_24940689_24940776
ENSMUSG00000044533.16_24939247_24940904_1	chr17	+	932	5	FSM	ENSMUSG00000044533.16	ENSMUST00000054289.13	1094	5	163	-1	22	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	25834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTGTCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	24939246	24940904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
ENSMUSG00000044548.12_71357551_71364710_1	chr12	+	1244	4	FSM	ENSMUSG00000044548.12	ENST00000541264.2	2399	4	99	1056	99	-958	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCGAAAAAGATGTCGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	71357550	71364710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_71357740_71359459_71359593_71360558_71360715_71363944
ENSMUSG00000044548.12_71359478_71364991_1	chr12	+	1318	3	ISM	ENSMUSG00000044548.12	ENST00000541264.2	2399	4	2026	775	2026	-677	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCCAGACGACTCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	71359477	71364991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_71359593_71360558_71360715_71363944
ENSMUSG00000044548.12_71360639_71365159_1	chr12	+	1291	2	ISM	ENSMUSG00000044548.12	ENST00000541264.2	2399	4	3187	607	3187	-509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCGAAGCACAAGCGAACC	NA	NA	NA	NA	NA	NA	NA	NA	71360638	71365159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_71360715_71363944
ENSMUSG00000044566.16_38190030_38216511_1	chr13	-	2648	12	ISM	ENSMUSG00000044566.16	ENSMUST00000110233.8	2875	13	4388	2	4388	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATGTTAACTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	38216511	38190029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_38190150_38191915_38191985_38195323_38195395_38196367_38196473_38199655_38199764_38200386_38200468_38201272_38201384_38203142_38203290_38206388_38207445_38209258_38209780_38212078_38212167_38216340
ENSMUSG00000044573.17_30943655_30946222_1	chr12	-	2406	2	ISM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	15366	0	8920	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTGGGATTTTAATTG	NA	NA	NA	NA	NA	NA	NA	NA	30946222	30943654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_30945953_30946114
ENSMUSG00000044573.17_30943778_30947805_1	chr12	-	2343	3	ISM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	13783	123	7337	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACATTTACAGAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	30947805	30943777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_30945953_30946114_30946221_30947743
ENSMUSG00000044573.17_30943999_30961548_1	chr12	-	2370	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	22	674	22	-344	multi-exon	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTTATTCAGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	30961548	30943998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
ENSMUSG00000044573.17_30944447_30954732_1	chr12	-	1690	4	ISM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	6856	792	410	-792	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGCTCCTGTGGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	30954732	30944446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716
ENSMUSG00000044573.17_30944599_30961548_1	chr12	-	1770	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	40	944	22	-944	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTAGGAATATGCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	30961548	30944598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
ENSMUSG00000044573.17_30944678_30961548_1	chr12	-	1691	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	40	1023	22	-1023	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTACTGGTGAGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	30961548	30944677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
ENSMUSG00000044573.17_30954720_30955142_1	chr12	-	203	2	FSM	ENSMUSG00000044573.17	ENST00000405233.5	257	2	0	54	0	-54	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTAGAAAAGATCTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	30955142	30954719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_30954831_30955050
ENSMUSG00000044600.15_73320147_73323862_1	chr8	-	1650	3	ISM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	1070	1115	1031	-1115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTACTACCAACCCTA	NA	NA	NA	NA	NA	NA	NA	NA	73323862	73320146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_73321653_73322699_73322791_73323809
ENSMUSG00000044600.15_73320304_73324932_1	chr8	-	1620	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	0	1272	0	1027	multi-exon	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTTCAGTAGTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	73324932	73320303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
ENSMUSG00000044626.14_21774529_21800139_1	chr16	-	1089	7	ISM	ENSMUSG00000044626.14	ENST00000424591.6	1515	8	2882	0	2882	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACACCCTCAGGGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	21800139	21774528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786895_21792803_21792898_21800085
ENSMUSG00000044626.14_21774668_21802744_1	chr16	-	1095	8	NIC	ENSMUSG00000044626.14	novel	1515	8	NA	NA	277	-139	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAACACCACTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	21802744	21774667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786895_21792807_21792898_21800085_21800195_21802650
ENSMUSG00000044626.14_21774701_21802839_1	chr16	-	1161	8	FSM	ENSMUSG00000044626.14	ENST00000424591.6	1515	8	182	172	182	-172	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCGCGTCACAAAAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	21802839	21774700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786895_21792803_21792898_21800085_21800195_21802650
ENSMUSG00000044626.14_21774746_21802859_1	chr16	-	1132	8	NIC	ENSMUSG00000044626.14	novel	1515	8	NA	NA	162	-217	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATGGGGAAGAAAACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	21802859	21774745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786895_21792807_21792898_21800085_21800195_21802650
ENSMUSG00000044626.14_21774789_21802867_1	chr16	-	1101	8	FSM	ENSMUSG00000044626.14	ENST00000424591.6	1515	8	154	260	154	-260	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTCAGTGCCTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	21802867	21774788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786895_21792803_21792898_21800085_21800195_21802650
ENSMUSG00000044626.14_21774806_21802902_1	chr16	-	1115	8	NIC	ENSMUSG00000044626.14	novel	1515	8	NA	NA	119	-277	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTCTACAGCTATAGGC	NA	NA	NA	NA	NA	NA	NA	NA	21802902	21774805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786895_21792807_21792898_21800085_21800195_21802650
ENSMUSG00000044626.14_21774817_21795058_1	chr16	-	823	7	ISM	ENSMUSG00000044626.14	ENST00000296252.9	1617	9	7963	288	7963	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGACATCAAGATCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	21795058	21774816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786895_21792803_21792898_21794982
ENSMUSG00000044626.14_21774850_21802912_1	chr16	-	1085	8	FSM	ENSMUSG00000044626.14	ENST00000424591.6	1515	8	109	321	109	-321	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGTAGCTGCTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	21802912	21774849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786895_21792803_21792898_21800085_21800195_21802650
ENSMUSG00000044626.14_21777576_21802662_1	chr16	-	814	8	ISM	ENSMUSG00000044626.14	ENST00000296252.9	1617	9	359	3047	359	-3047	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGTCCTGCAGATGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	21802662	21777575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_21777705_21780894_21781007_21784703_21784800_21786734_21786895_21792803_21792898_21794982_21795085_21800085_21800195_21802650
ENSMUSG00000044626.14_21777624_21802720_1	chr16	-	824	8	ISM	ENSMUSG00000044626.14	ENST00000296252.9	1617	9	301	3095	301	-3095	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTTGTTCTCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	21802720	21777623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_21777705_21780894_21781007_21784703_21784800_21786734_21786895_21792803_21792898_21794982_21795085_21800085_21800195_21802650
ENSMUSG00000044626.14_21784756_21802960_1	chr16	-	819	6	ISM	ENSMUSG00000044626.14	ENST00000296252.9	1617	9	61	10227	61	-10227	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCGATGACGAAGGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	21802960	21784755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_21784800_21786734_21786895_21792803_21792898_21794982_21795085_21800085_21800195_21802650
ENSMUSG00000044627.12_32168828_32178087_1	chr2	-	772	5	NNC	ENSMUSG00000044627.12	novel	775	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	32178087	32168827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177651_32177893
ENSMUSG00000044627.12_32168930_32177947_2	chr2	-	533	5	FSM	ENSMUSG00000044627.12	ENSMUST00000183946.8	768	5	133	102	133	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATTGGGAGGGGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	32177947	32168929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32177897
ENSMUSG00000044629.6_17002170_17057632_1	chr11	+	423	3	FSM	ENSMUSG00000044629.6	ENST00000409559.7	423	3	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCCCTTCAAATTACTT	NA	NA	NA	NA	NA	NA	NA	NA	17002169	17057632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_17002349_17004630_17004782_17057539
ENSMUSG00000044629.6_17002280_17028743_1	chr11	+	564	3	FSM	ENSMUSG00000044629.6	ENSMUST00000058159.6	1654	3	462	628	110	-628	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCTGAAAGCTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	17002279	17028743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_17002349_17004630_17004782_17028399
ENSMUSG00000044646.16_76270643_76279207_1	chr18	+	935	2	ISM	ENSMUSG00000044646.16	ENSMUST00000167921.2	2147	3	78114	307	78114	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAGCTGTTTGGACGGG	NA	NA	NA	NA	NA	NA	NA	NA	76270642	76279207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_76271122_76278751
ENSMUSG00000044707.8_43419246_43476548_1	chr11	+	1396	6	FSM	ENSMUSG00000044707.8	ENST00000644313.1	1395	6	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACCACAGGGAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	43419245	43476548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_43419430_43420181_43420287_43447381_43447596_43470510_43470814_43474006_43474167_43476118
ENSMUSG00000044707.8_43419246_43476548_2	chr11	+	1387	6	NNC	ENSMUSG00000044707.8	novel	1395	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1667	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACCACAGGGAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	43419245	43476548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_43419430_43420181_43420287_43447390_43447596_43470510_43470814_43474006_43474167_43476118
ENSMUSG00000044707.8_43419246_43476548_3	chr11	+	1391	6	NNC	ENSMUSG00000044707.8	novel	1395	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1667	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACCACAGGGAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	43419245	43476548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_43419430_43420181_43420287_43447381_43447596_43470515_43470814_43474006_43474167_43476118
ENSMUSG00000044709.7_19299171_19307748_1	chr7	-	723	3	FSM	ENSMUSG00000044709.7	ENSMUST00000117222.2	1023	3	0	300	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCCCAGGCCTCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	19307748	19299170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_19299602_19307233_19307470_19307692
ENSMUSG00000044712.16_73333682_73359691_1	chr12	+	2311	5	FSM	ENSMUSG00000044712.16	ENSMUST00000153941.8	3927	5	13	1603	-10	735	multi-exon	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATTTTTGAGACGTATA	NA	NA	NA	NA	NA	NA	NA	NA	73333681	73359691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_73333807_73335166_73335298_73338933_73339008_73356918_73356972_73357763
ENSMUSG00000044712.16_73333682_73398906_1	chr12	+	1269	15	ISM	ENSMUSG00000044712.16	ENSMUST00000140523.8	3032	16	129	1917	-10	-42	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAGCCGAGAGGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	73333681	73398906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73333807_73335166_73335298_73338933_73339008_73356918_73356972_73365750_73365791_73376753_73376833_73383795_73383879_73384283_73384343_73388181_73388248_73388480_73388535_73390442_73390523_73391566_73391668_73397287_73397413_73398524_73398670_73398852
ENSMUSG00000044712.16_73335167_73398947_1	chr12	+	1185	14	ISM	ENSMUSG00000044712.16	ENSMUST00000140523.8	3032	16	1614	1876	1333	-1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTGTTTCCAACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	73335166	73398947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_73335298_73338933_73339008_73356918_73356972_73365750_73365791_73376753_73376833_73383795_73383879_73384283_73384343_73388181_73388248_73388480_73388535_73390442_73390523_73391566_73391668_73397287_73397413_73398524_73398670_73398852
ENSMUSG00000044715.8_105651643_105667838_1	chr12	+	1276	3	FSM	ENSMUSG00000044715.8	ENSMUST00000051934.7	2720	3	0	1444	0	-1444	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGTATTTTGGCCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	105651642	105667838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_105651718_105664976_105665236_105666896
ENSMUSG00000044715.8_105665138_105668081_1	chr12	+	1283	2	ISM	ENSMUSG00000044715.8	ENSMUST00000051934.7	2720	3	13495	1201	13495	-1201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCATTCAGAAACTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	105665137	105668081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_105665236_105666896
ENSMUSG00000044734.17_33027104_33029461_1	chr13	-	272	2	ISM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	5707	1029	5707	-1029	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCTATACCCTCAACTC	NA	NA	NA	NA	NA	NA	NA	NA	33029461	33027103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_33027206_33029291
ENSMUSG00000044734.17_33029405_33031428_1	chr13	-	254	3	ISM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	3740	3330	3740	-3330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCGGACCTGAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	33031428	33029404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_33029460_33029653_33029797_33031372
ENSMUSG00000044734.17_33029782_33032733_1	chr13	-	265	3	ISM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	2435	3707	2435	-3707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTCTGTGGGTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	33032733	33029781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_33029797_33031372_33031491_33032601
ENSMUSG00000044734.17_33031446_33034271_1	chr13	-	233	3	ISM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	897	5371	897	-5371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGATTTTCTGCATGC	NA	NA	NA	NA	NA	NA	NA	NA	33034271	33031445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_33031491_33032601_33032740_33034221
ENSMUSG00000044768.17_97573186_97588638_1	chr1	-	1011	3	FSM	ENSMUSG00000044768.17	ENST00000510890.1	2622	3	55	1556	55	-1556	multi-exon	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTTAGCTAGGAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	97588638	97573185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_97574087_97582324_97582415_97588618
ENSMUSG00000044768.17_97573287_97588651_1	chr1	-	923	3	FSM	ENSMUSG00000044768.17	ENST00000510890.1	2622	3	42	1657	42	-1657	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAGGAATGAAATCACAG	NA	NA	NA	NA	NA	NA	NA	NA	97588651	97573286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_97574087_97582324_97582415_97588618
ENSMUSG00000044786.7_28076216_28076913_1	chr7	-	576	2	FSM	ENSMUSG00000044786.7	ENST00000597629.3	1505	2	928	1	928	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTGAGATGAAATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	28076913	28076215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28076623_28076744
ENSMUSG00000044786.7_28076356_28077023_1	chr7	-	546	2	FSM	ENSMUSG00000044786.7	ENST00000597629.3	1505	2	818	141	818	-140	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCGTCTACTCCGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	28077023	28076355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28076623_28076744
ENSMUSG00000044786.7_28077000_28078765_1	chr7	-	1086	2	FSM	ENSMUSG00000044786.7	ENSMUST00000051241.7	2790	2	913	791	-85	-784	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGTCTCTGAGTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	28078765	28076999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28077919_28078598
ENSMUSG00000044786.7_28077370_28079136_1	chr7	-	1087	2	FSM	ENSMUSG00000044786.7	ENSMUST00000051241.7	2790	2	542	1161	-456	-1154	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGGCTTTTCTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	28079136	28077369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28077919_28078598
ENSMUSG00000044792.8_59904045_59910609_1	chr13	-	933	3	ISM	ENSMUSG00000044792.8	ENSMUST00000057115.7	1942	4	7015	822	7015	-822	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCAGGCCTGGGTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	59910609	59904044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_59904818_59906703_59906810_59910555
ENSMUSG00000044792.8_59904239_59917567_1	chr13	-	869	4	FSM	ENSMUSG00000044792.8	ENSMUST00000057115.7	1942	4	57	1016	57	-1016	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATCCCTTTCTCAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	59917567	59904238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_59904818_59906703_59906810_59910555_59910610_59917437
ENSMUSG00000044795.13_69284329_69285857_1	chr11	-	577	3	ISM	ENSMUSG00000044795.13	ENSMUST00000108660.8	1034	4	302	240	302	109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGACATGCAAGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	69285857	69284328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69284627_69285453_69285673_69285797
ENSMUSG00000044795.13_69284438_69286059_1	chr11	-	585	4	FSM	ENSMUSG00000044795.13	ENSMUST00000108660.8	1034	4	100	349	100	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGGAGTTTGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	69286059	69284437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69284627_69285453_69285673_69285797_69285875_69285959
ENSMUSG00000044857.9_27408574_27423066_1	chr17	-	2250	9	FSM	ENSMUSG00000044857.9	ENSMUST00000055117.9	2627	9	377	0	377	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTTATTTGTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	27423066	27408573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
ENSMUSG00000044864.17_38506228_38508486_1	chr3	-	724	2	FSM	ENSMUSG00000044864.17	ENSMUST00000094300.4	1944	2	1220	0	1220	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTCCACTAACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	38508486	38506227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_38506655_38508189
ENSMUSG00000044864.17_38506636_38508815_1	chr3	-	645	2	FSM	ENSMUSG00000044864.17	ENSMUST00000094300.4	1944	2	891	408	891	-408	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCATTGTGGTTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	38508815	38506635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_38506655_38508189
ENSMUSG00000044864.17_38511099_38517080_1	chr3	-	668	2	ISM	ENSMUSG00000044864.17	ENST00000504087.6	7931	4	21012	7347	-7374	-4871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTCAAACTTGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	38517080	38511098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_38511735_38517048
ENSMUSG00000044864.17_38511148_38517137_1	chr3	-	676	2	ISM	ENSMUSG00000044864.17	ENST00000504087.6	7931	4	20955	7396	-7431	-4920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGAACCTGACCCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	38517137	38511147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_38511735_38517048
ENSMUSG00000044864.17_38511249_38517225_1	chr3	-	663	2	ISM	ENSMUSG00000044864.17	ENST00000504087.6	7931	4	20867	7497	-7519	-5021	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCCGAGTGGCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	38517225	38511248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_38511735_38517048
ENSMUSG00000044864.17_38511424_38536972_1	chr3	-	674	3	ISM	ENSMUSG00000044864.17	ENST00000504087.6	7931	4	1120	7672	1120	-5196	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTCTGAACGTGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	38536972	38511423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_38511735_38517048_38517279_38536839
ENSMUSG00000044864.17_38511650_38537240_1	chr3	-	716	3	ISM	ENSMUSG00000044864.17	ENST00000504087.6	7931	4	852	7898	852	-5422	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAGGCACTGCGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	38537240	38511649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_38511735_38517048_38517279_38536839
ENSMUSG00000044864.17_38517200_38537427_1	chr3	-	667	2	ISM	ENSMUSG00000044864.17	ENST00000504087.6	7931	4	665	13448	665	-10972	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAATGTGGTGGAAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	38537427	38517199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_38517279_38536839
ENSMUSG00000044894.15_53319299_53321531_1	chr11	-	838	2	NNC	ENSMUSG00000044894.15	novel	1521	2	NA	NA	123	481	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTAGCCTAAGGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	53321531	53319298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_53319978_53321372
ENSMUSG00000044894.15_53319299_53321531_2	chr11	-	848	2	FSM	ENSMUSG00000044894.15	ENSMUST00000061326.5	1521	2	123	550	123	481	multi-exon	FALSE	canonical	NA	NA	NA	NA	1623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTAGCCTAAGGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	53321531	53319298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_53319978_53321362
ENSMUSG00000044894.15_53319780_53321418_1	chr11	-	254	2	FSM	ENSMUSG00000044894.15	ENSMUST00000061326.5	1521	2	236	1031	-157	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	53321418	53319779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_53319978_53321362
ENSMUSG00000044906.7_70586211_70601151_1	chr18	-	1028	6	ISM	ENSMUSG00000044906.7	ENSMUST00000067556.4	2291	9	4400	0	1674	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAAGGGGAAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	70601151	70586210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600829
ENSMUSG00000044906.7_70586211_70605551_1	chr18	-	771	6	FSM	ENSMUSG00000044906.7	ENST00000578138.5	748	6	-9	-14	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAAGGGGAAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	70605551	70586210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70605486
ENSMUSG00000044906.7_70597085_70602625_1	chr18	-	1067	4	ISM	ENSMUSG00000044906.7	ENSMUST00000212155.2	1585	6	200	10820	200	-10820	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAATGTGTGAATGCGT	NA	NA	NA	NA	NA	NA	NA	NA	70602625	70597084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_70597136_70600405_70600557_70600829_70601589_70602519
ENSMUSG00000044906.7_70601285_70605551_1	chr18	-	1130	4	ISM	ENSMUSG00000044906.7	ENSMUST00000067556.4	2291	9	0	15074	0	-15020	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAACCCCAAAACCTATTA	NA	NA	NA	NA	NA	NA	NA	NA	70605551	70601284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_70601589_70602519_70602849_70604743_70605051_70605361
ENSMUSG00000044912.12_74281678_74313985_1	chr12	+	1103	3	NNC	ENSMUSG00000044912.12	novel	1706	4	NA	NA	1756	-419	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGCTTCTTCCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	74281677	74313985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_74282024_74284961_74285145_74313411
ENSMUSG00000044912.12_74281826_74314055_1	chr12	+	1032	3	ISM	ENSMUSG00000044912.12	ENST00000430451.3	1706	4	1904	349	1904	-349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTTTCCATCACTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	74281825	74314055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_74282024_74284954_74285145_74313411
ENSMUSG00000044912.12_74281826_74314202_1	chr12	+	1179	3	ISM	ENSMUSG00000044912.12	ENST00000430451.3	1706	4	1904	202	1904	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGCCCTGTTTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	74281825	74314202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_74282024_74284954_74285145_74313411
ENSMUSG00000044912.12_74284955_74314411_1	chr12	+	1190	2	ISM	ENSMUSG00000044912.12	ENST00000430451.3	1706	4	5033	-7	5033	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGATTTTGTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	74284954	74314411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_74285145_74313411
ENSMUSG00000044934.14_64282167_64291986_1	chr13	-	1341	3	ISM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	9030	1335	9030	-1335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCATATTTATATTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	64291986	64282166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_64283351_64290021_64290161_64291968
ENSMUSG00000044934.14_64282344_64293415_1	chr13	-	1338	4	ISM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	7601	1512	7601	-1512	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATGTGTACACCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	64293415	64282343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_64283351_64290021_64290161_64291968_64292089_64293343
ENSMUSG00000044934.14_64282389_64293474_1	chr13	-	1352	4	ISM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	7542	1557	7542	-1557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGATTAATCTTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	64293474	64282388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_64283351_64290021_64290161_64291968_64292089_64293343
ENSMUSG00000044934.14_64282559_64300555_1	chr13	-	1344	5	FSM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	461	1727	461	-1727	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTATTTGAGGCTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	64300555	64282558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_64283351_64290021_64290161_64291968_64292089_64293343_64293495_64300413
ENSMUSG00000044934.14_64282607_64300624_1	chr13	-	1365	5	FSM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	392	1775	392	-1775	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAACTATTTGGAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	64300624	64282606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_64283351_64290021_64290161_64291968_64292089_64293343_64293495_64300413
ENSMUSG00000044934.14_64282876_64300881_1	chr13	-	1353	5	FSM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	135	2044	135	-2044	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCTAGGTTTTGCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	64300881	64282875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_64283351_64290021_64290161_64291968_64292089_64293343_64293495_64300413
ENSMUSG00000044950.8_43573375_43596544_1	chr11	+	1322	3	FSM	ENSMUSG00000044950.8	ENST00000429776.2	1854	3	71	461	71	-461	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTAGCTCTTCTGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	43573374	43596544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_43573444_43577183_43577253_43595360
ENSMUSG00000044968.17_21869560_21888274_1	chr5	-	1684	4	ISM	ENSMUSG00000044968.17	ENSMUST00000115217.8	3954	5	18118	1661	18118	-1659	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACATCTCATAAAATGATC	NA	NA	NA	NA	NA	NA	NA	NA	21888274	21869559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153
ENSMUSG00000044986.11_78283756_78290107_1	chr15	-	1142	2	NNC	ENSMUSG00000044986.11	novel	1144	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTGCCTCCTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	78290107	78283755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_78284225_78289434
ENSMUSG00000045009.10_113472101_113473995_1	chr6	-	1029	2	ISM	ENSMUSG00000045009.10	ENST00000412055.6	3064	4	4906	845	4784	-845	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTCGTCCCAGGCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	113473995	113472100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113473027_113473892
ENSMUSG00000045009.10_113472446_113474528_1	chr6	-	1033	3	ISM	ENSMUSG00000045009.10	ENSMUST00000204134.3	3424	4	4364	1560	4251	783	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGGCTACAGACCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	113474528	113472445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113473027_113473892_113474049_113474232
ENSMUSG00000045009.10_113472606_113474705_1	chr6	-	1050	3	ISM	ENSMUSG00000045009.10	ENSMUST00000204134.3	3424	4	4187	1720	4074	623	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGAGTACGTGCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	113474705	113472605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113473027_113473892_113474049_113474232
ENSMUSG00000045009.10_113472852_113474928_1	chr6	-	1027	3	ISM	ENSMUSG00000045009.10	ENSMUST00000204134.3	3424	4	3964	1966	3851	377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCCAATGCCACCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	113474928	113472851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113473027_113473892_113474049_113474232
ENSMUSG00000045009.10_113475190_113478856_1	chr6	-	134	2	ISM	ENSMUSG00000045009.10	ENST00000411976.2	1306	3	28	1327	-2	-1327	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTGCTGTTGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	113478856	113475189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113475278_113478810
ENSMUSG00000045038.15_86795585_86803885_1	chr17	+	809	5	NNC	ENSMUSG00000045038.15	novel	746	5	NA	NA	0	69	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1036	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAGAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86795584	86803885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_86795731_86798178_86798276_86800648_86800849_86803365_86803540_86803693
ENSMUSG00000045038.15_86795585_86803885_2	chr17	+	815	5	FSM	ENSMUSG00000045038.15	ENST00000394874.1	746	5	0	-69	0	69	multi-exon	FALSE	canonical	NA	NA	NA	NA	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAGAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86795584	86803885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_86795731_86798178_86798276_86800648_86800849_86803365_86803540_86803687
ENSMUSG00000045038.15_86795585_86803885_3	chr17	+	806	5	NNC	ENSMUSG00000045038.15	novel	746	5	NA	NA	0	69	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1019	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAGAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86795584	86803885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_86795731_86798178_86798276_86800657_86800849_86803365_86803540_86803687
ENSMUSG00000045045.8_4661813_4663777_1	chr19	-	597	2	ISM	ENSMUSG00000045045.8	ENST00000393952.3	1533	3	1383	1	1383	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGGTTTTTCGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	4663777	4661812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4662033_4663400
ENSMUSG00000045045.8_4661972_4663949_1	chr19	-	610	2	ISM	ENSMUSG00000045045.8	ENST00000393952.3	1533	3	1211	160	1211	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTACTTGGTGGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	4663949	4661971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4662033_4663400
ENSMUSG00000045045.8_4663985_4665059_1	chr19	-	627	2	ISM	ENSMUSG00000045045.8	ENST00000393952.3	1533	3	101	2173	101	-2165	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACCCCCAGGTGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	4665059	4663984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4664543_4664990
ENSMUSG00000045064.6_85334986_85336833_1	chr12	+	625	2	ISM	ENSMUSG00000045064.6	ENST00000674097.1	2419	3	530	7281	-379	-846	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCAAGACTCCCTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	85334985	85336833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_85335103_85336325
ENSMUSG00000045064.6_85336325_85343720_1	chr12	+	1379	2	FSM	ENSMUSG00000045064.6	ENST00000439583.2	1352	2	1	-28	1	28	multi-exon	FALSE	canonical	NA	NA	NA	NA	4886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCATGGTTTGTGCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	85336324	85343720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_85337159_85343175
ENSMUSG00000045078.13_143066031_143076033_1	chr5	-	707	6	ISM	ENSMUSG00000045078.13	ENSMUST00000200607.5	3704	17	22702	88456	8167	679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAAACAGGAGCAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	143076033	143066030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874
ENSMUSG00000045078.13_143071697_143076323_1	chr5	-	723	4	ISM	ENSMUSG00000045078.13	ENSMUST00000200607.5	3704	17	22412	94122	7877	-4979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCTTAGCAGCCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	143076323	143071696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143071791_143073273_143073377_143075497_143075575_143075874
ENSMUSG00000045078.13_143071734_143076391_1	chr5	-	754	4	ISM	ENSMUSG00000045078.13	ENSMUST00000200607.5	3704	17	22344	94159	7809	-5016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCCAAGCTGCTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	143076391	143071733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143071791_143073273_143073377_143075497_143075575_143075874
ENSMUSG00000045078.13_143075896_143078857_1	chr5	-	726	2	ISM	ENSMUSG00000045078.13	ENSMUST00000053498.13	4474	17	19892	99248	5343	-9178	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACTGTTAGTGAAAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	143078857	143075895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143076514_143078749
ENSMUSG00000045078.13_143076028_143084260_1	chr5	-	744	3	ISM	ENSMUSG00000045078.13	ENSMUST00000053498.13	4474	17	14489	99380	-55	-9310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGCTTGAAGACCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	143084260	143076027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143076514_143078749_143078881_143084133
ENSMUSG00000045092.9_115504557_115507309_1	chr3	-	2265	2	FSM	ENSMUSG00000045092.9	ENST00000475289.2	2650	2	55	330	55	-330	multi-exon	FALSE	canonical	NA	NA	NA	NA	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACAGCACCTTTGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	115507309	115504556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_115506764_115507251
ENSMUSG00000045092.9_115505227_115508495_1	chr3	-	1675	2	FSM	ENSMUSG00000045092.9	ENSMUST00000055676.4	3046	2	226	1145	226	-1000	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCAGTGGGTTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	115508495	115505226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_115506764_115508357
ENSMUSG00000045095.17_93653136_93762630_1	chr6	-	5707	19	NIC	ENSMUSG00000045095.17	novel	6147	22	NA	NA	127905	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGAATTAGGCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	93762630	93653135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425
ENSMUSG00000045095.17_93653286_93769520_1	chr6	-	5747	20	NIC	ENSMUSG00000045095.17	novel	7929	25	NA	NA	121015	-150	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTACACCGAGTAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	93769520	93653285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327
ENSMUSG00000045095.17_93653514_93920203_1	chr6	-	5672	22	NIC	ENSMUSG00000045095.17	novel	7929	25	NA	NA	100	-378	combination_of_known_junctions	TRUE	canonical	NA	NA	NA	NA	1384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTAATCGCTACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	93920203	93653513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93920184
ENSMUSG00000045095.17_93653583_93920252_1	chr6	-	5652	22	NIC	ENSMUSG00000045095.17	novel	7929	25	NA	NA	51	-447	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATTGATTCTTGGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	93920252	93653582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93920184
ENSMUSG00000045095.17_93653655_93920301_1	chr6	-	5629	22	NIC	ENSMUSG00000045095.17	novel	7929	25	NA	NA	2	-519	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATAAAAGAGAATTTATG	NA	NA	NA	NA	NA	NA	NA	NA	93920301	93653654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93920184
ENSMUSG00000045100.12_94477350_94511192_1	chr6	+	267	3	ISM	ENSMUSG00000045100.12	ENST00000336733.10	496	6	26	58273	26	-58273	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTGCAGATCTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	94477349	94511192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_94477439_94487732_94487843_94511124
ENSMUSG00000045102.13_34164783_34181781_1	chr5	-	523	6	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	125412	0	125412	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCTGACCTCAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	34181781	34164782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34164854_34166183_34166246_34166930_34166999_34170845_34170925_34171586_34171698_34181649
ENSMUSG00000045102.13_34166202_34190163_1	chr5	-	508	6	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	117030	1419	117030	-1419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAACTGCAGCTGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	34190163	34166201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34166246_34166930_34166999_34170845_34170925_34171586_34171698_34181649_34181782_34190089
ENSMUSG00000045102.13_34171690_34237303_1	chr5	-	474	6	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	69890	6907	69890	-6907	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCATCTTGGGTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	34237303	34171689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34171698_34181649_34181782_34190089_34190173_34234440_34234556_34236259_34236338_34237245
ENSMUSG00000045102.13_34181718_34262573_1	chr5	-	518	7	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	44620	16935	44620	-16935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTGCAGAAGTACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	34262573	34181717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34181782_34190089_34190173_34234440_34234556_34236259_34236338_34237245_34237304_34261241_34261308_34262519
ENSMUSG00000045102.13_34236260_34270717_1	chr5	-	558	8	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	36476	71477	36476	-71477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATACATAGGATGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	34270717	34236259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34236338_34237245_34237304_34261241_34261308_34262519_34262574_34264430_34264488_34265657_34265754_34266694_34266779_34270652
ENSMUSG00000045102.13_34237242_34271483_1	chr5	-	545	8	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	35710	72459	35710	-72459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTACTTCCTATCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	34271483	34237241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34237304_34261241_34261308_34262519_34262574_34264430_34264488_34265657_34265754_34266694_34266779_34270652_34270718_34271422
ENSMUSG00000045102.13_34261242_34272772_1	chr5	-	552	8	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	34421	96459	34421	-96459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTCTTGCCCATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	34272772	34261241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34261308_34262519_34262574_34264430_34264488_34265657_34265754_34266694_34266779_34270652_34270718_34271422_34271484_34272703
ENSMUSG00000045102.13_34262522_34274186_1	chr5	-	518	8	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	33007	97739	33007	-97739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTAACTAAGGCTTAACAA	NA	NA	NA	NA	NA	NA	NA	NA	34274186	34262521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34262574_34264430_34264488_34265657_34265754_34266694_34266779_34270652_34270718_34271422_34271484_34272703_34272773_34274152
ENSMUSG00000045102.13_34265694_34276262_1	chr5	-	530	7	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	30931	100911	30931	-100911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGCAGAACCAGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	34276262	34265693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34265754_34266694_34266779_34270652_34270718_34271422_34271484_34272703_34272773_34274152_34274311_34276229
ENSMUSG00000045102.13_34270688_34280044_1	chr5	-	526	6	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	27149	105905	27149	-105905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGAAATGGAGAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	34280044	34270687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34270718_34271422_34271484_34272703_34272773_34274152_34274311_34276229_34276343_34279949
ENSMUSG00000045102.13_34274153_34286486_1	chr5	-	502	4	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	20707	109370	20707	-109370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGATGTTTAAGATAAGG	NA	NA	NA	NA	NA	NA	NA	NA	34286486	34274152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34274311_34276229_34276343_34279949_34280141_34286446
ENSMUSG00000045102.13_34274199_34286543_1	chr5	-	513	4	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	20650	109416	20650	-109416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCAAACCAAGCAGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	34286543	34274198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34274311_34276229_34276343_34279949_34280141_34286446
ENSMUSG00000045102.13_34274259_34286608_1	chr5	-	518	4	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	20585	109476	20585	-109476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGACACTGCACCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	34286608	34274258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34274311_34276229_34276343_34279949_34280141_34286446
ENSMUSG00000045102.13_34276324_34286752_1	chr5	-	516	3	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	20441	111541	20441	-111541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGTAAATGTCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	34286752	34276323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34276343_34279949_34280141_34286446
ENSMUSG00000045102.13_34280073_34286885_1	chr5	-	507	2	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	20308	115290	20308	-115290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCAGCCCATGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	34286885	34280072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34280141_34286446
ENSMUSG00000045102.13_34286523_34307099_1	chr5	-	548	3	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	94	121740	94	-121740	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTCAAGCAGGCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	34307099	34286522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34286939_34290441_34290535_34307060
ENSMUSG00000045102.13_34286591_34307135_1	chr5	-	516	3	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	58	121808	58	-121808	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTTTGGGGGAAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	34307135	34286590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34286939_34290441_34290535_34307060
ENSMUSG00000045102.13_34286652_34307189_1	chr5	-	509	3	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	4	121869	4	-121869	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACAGCTCTGGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	34307189	34286651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34286939_34290441_34290535_34307060
ENSMUSG00000045103.20_83315655_83469368_1	chrX	+	591	5	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	195402	777208	195402	-645835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGCAGCATTTGTATAAG	NA	NA	NA	NA	NA	NA	NA	NA	83315654	83469368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_83315734_83353404_83353547_83356082_83356233_83416988_83417154_83469313
ENSMUSG00000045103.20_83356123_83517886_1	chrX	+	633	5	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	235870	728690	235870	-597317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTTGATCGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	83356122	83517886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_83356233_83416988_83417154_83469313_83469416_83475489_83475599_83517739
ENSMUSG00000045103.20_83469334_83619264_1	chrX	+	641	5	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	349081	627312	349081	-495939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTAAGGAAGAAGCCGAA	NA	NA	NA	NA	NA	NA	NA	NA	83469333	83619264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_83469416_83475489_83475599_83517739_83517973_83575479_83575598_83619165
ENSMUSG00000045103.20_83475487_83619377_1	chrX	+	675	4	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	355234	627199	355234	-495826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTGTCAAGCATATCTT	NA	NA	NA	NA	NA	NA	NA	NA	83475486	83619377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_83475599_83517739_83517973_83575479_83575598_83619165
ENSMUSG00000045103.20_83517905_83690710_1	chrX	+	621	5	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	397652	555866	397652	-424493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTTTCTTTCCTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	83517904	83690710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_83517973_83575479_83575598_83619165_83619378_83642701_83642857_83690642
ENSMUSG00000045103.20_83575478_83690832_1	chrX	+	677	4	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	455225	555744	455225	-424371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTGAGTGTTTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	83575477	83690832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_83575598_83619165_83619378_83642701_83642857_83690642
ENSMUSG00000045103.20_83619191_83817298_1	chrX	+	643	4	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	498938	429278	-472718	-297905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACGTTTGGATAACATGAA	NA	NA	NA	NA	NA	NA	NA	NA	83619190	83817298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_83619378_83642701_83642857_83690642_83690833_83817187
ENSMUSG00000045103.20_83642700_83825681_1	chrX	+	677	4	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	522447	420895	-449209	-289522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGATGCTTTAGAGACTA	NA	NA	NA	NA	NA	NA	NA	NA	83642699	83825681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_83642857_83690642_83690833_83817187_83817361_83825524
ENSMUSG00000045103.20_83690746_83861695_1	chrX	+	601	5	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	570493	384881	-401163	-253508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACGCTGAATGGGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	83690745	83861695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_83690833_83817187_83817361_83825524_83825682_83860903_83861025_83861632
ENSMUSG00000045103.20_83690774_83861769_1	chrX	+	647	5	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	570521	384807	-401135	-253434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGGAACTTCAGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	83690773	83861769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_83690833_83817187_83817361_83825524_83825682_83860903_83861025_83861632
ENSMUSG00000045103.20_83861758_84148789_1	chrX	+	608	7	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	741505	97787	-230151	-13690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGCACAACCTCAAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	83861757	84148789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_83861902_83892253_83892401_83987750_83987830_84018310_84018372_84097576_84097639_84133422_84133498_84148749
ENSMUSG00000045103.20_83861797_84148852_1	chrX	+	632	7	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	741544	97724	-230112	-13627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATTTATGATCGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	83861796	84148852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_83861902_83892253_83892401_83987750_83987830_84018310_84018372_84097576_84097639_84133422_84133498_84148749
ENSMUSG00000045103.20_83861845_84148906_1	chrX	+	638	7	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	741592	97670	-230064	-13573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGGATATGTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	83861844	84148906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_83861902_83892253_83892401_83987750_83987830_84018310_84018372_84097576_84097639_84133422_84133498_84148749
ENSMUSG00000045103.20_84091925_84115207_1	chrX	+	819	3	FSM	ENSMUSG00000045103.20	ENST00000681870.1	815	3	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	4145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCATCTGTCCTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	84091924	84115207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_84092066_84097576_84097639_84114591
ENSMUSG00000045103.20_84133417_84183100_1	chrX	+	694	5	ISM	ENSMUSG00000045103.20	ENSMUST00000113992.3	1858	17	41398	63004	41398	20621	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATTAGTATTCAACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	84133416	84183100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933
ENSMUSG00000045103.20_84153549_84192801_1	chrX	+	679	6	ISM	ENSMUSG00000045103.20	ENSMUST00000113991.8	4438	18	61530	55844	61530	30322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAGACTAGTTGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	84153548	84192801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735
ENSMUSG00000045103.20_84182976_84196703_1	chrX	+	616	7	ISM	ENSMUSG00000045103.20	ENSMUST00000113991.8	4438	18	90957	51942	90957	34224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCCTGCCCAGATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	84182975	84196703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632
ENSMUSG00000045103.20_84185369_84221381_1	chrX	+	614	7	ISM	ENSMUSG00000045103.20	ENSMUST00000113991.8	4438	18	93350	27264	93350	-24723	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGAGATGATGCCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	84185368	84221381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309
ENSMUSG00000045103.20_84187634_84221553_1	chrX	+	712	6	ISM	ENSMUSG00000045103.20	ENSMUST00000113991.8	4438	18	95615	27092	95615	-24551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCCCCCACCCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	84187633	84221553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309
ENSMUSG00000045114.11_126617100_126618119_1	chr7	-	867	2	ISM	ENSMUSG00000045114.11	ENST00000636619.1	1581	3	1410	-163	1410	163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTTTTTAACCTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	126618119	126617099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126617903_126618055
ENSMUSG00000045114.11_126617679_126619184_1	chr7	-	412	3	FSM	ENSMUSG00000045114.11	ENST00000637565.1	1537	3	345	780	345	197	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCCACCCCACTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	126619184	126617678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126617903_126618055_126618178_126619118
ENSMUSG00000045114.11_126617679_126619263_1	chr7	-	491	3	FSM	ENSMUSG00000045114.11	ENST00000637565.1	1537	3	266	780	266	197	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCCACCCCACTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	126619263	126617678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126617903_126618055_126618178_126619118
ENSMUSG00000045114.11_126617679_126619263_2	chr7	-	896	3	FSM	ENSMUSG00000045114.11	ENST00000637403.1	1942	3	266	780	266	197	multi-exon	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCCACCCCACTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	126619263	126617678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126617903_126618055_126618189_126618724
ENSMUSG00000045114.11_126617876_126619499_1	chr7	-	530	3	FSM	ENSMUSG00000045114.11	ENST00000637565.1	1537	3	30	977	30	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGACTTTTCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	126619499	126617875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126617903_126618055_126618178_126619118
ENSMUSG00000045114.11_126617876_126619499_2	chr7	-	935	3	FSM	ENSMUSG00000045114.11	ENST00000637403.1	1942	3	30	977	30	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGACTTTTCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	126619499	126617875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126617903_126618055_126618189_126618724
ENSMUSG00000045114.11_126617876_126619499_3	chr7	-	934	3	NNC	ENSMUSG00000045114.11	novel	429	4	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGACTTTTCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	126619499	126617875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_126617903_126618055_126618189_126618725
ENSMUSG00000045128.10_71347366_71350056_1	chr8	-	1253	5	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGGCATCTGGTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	71350056	71347365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_71348152_71348250_71348354_71348559_71348690_71348776_71348957_71350002
ENSMUSG00000045128.10_71347366_71350056_2	chr8	-	1254	5	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGGCATCTGGTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	71350056	71347365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_71348152_71348243_71348348_71348559_71348690_71348776_71348957_71350002
ENSMUSG00000045128.10_71347366_71350056_3	chr8	-	1255	5	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGGCATCTGGTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	71350056	71347365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_71348152_71348243_71348354_71348564_71348690_71348776_71348957_71350002
ENSMUSG00000045128.10_71347366_71350056_4	chr8	-	1251	5	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGGCATCTGGTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	71350056	71347365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_71348143_71348243_71348354_71348559_71348690_71348776_71348957_71350002
ENSMUSG00000045128.10_71347366_71350056_5	chr8	-	1256	5	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGGCATCTGGTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	71350056	71347365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_71348152_71348243_71348354_71348559_71348681_71348771_71348957_71350002
ENSMUSG00000045136.7_34312069_34314217_1	chr13	-	724	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	120	1338	120	-1338	multi-exon	FALSE	canonical	NA	NA	NA	NA	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGGCCAGCTGAACGC	NA	NA	NA	NA	NA	NA	NA	NA	34314217	34312068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
ENSMUSG00000045136.7_34312107_34314337_1	chr13	-	806	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	0	1376	0	-1376	multi-exon	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGCCACCATGAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	34314337	34312106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
ENSMUSG00000045160.15_83326428_83335353_1	chr6	+	547	4	FSM	ENSMUSG00000045160.15	ENSMUST00000136501.2	2312	4	0	1765	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCACAGGTGCCTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	83326427	83335353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_83326537_83328247_83328372_83330023_83330113_83335128
ENSMUSG00000045160.15_83330022_83335619_1	chr6	+	582	2	ISM	ENSMUSG00000045160.15	ENSMUST00000120040.8	583	4	3824	-266	3594	241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGGTTTTGGTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	83330021	83335619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83330113_83335128
ENSMUSG00000045165.7_126690531_126692989_1	chr7	+	1763	2	FSM	ENSMUSG00000045165.7	ENSMUST00000056288.7	1932	2	0	169	0	-169	multi-exon	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCGCAGTGGGGAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	126690530	126692989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126690645_126691340
ENSMUSG00000045193.14_80003674_80006602_1	chr10	+	638	6	FSM	ENSMUSG00000045193.14	ENST00000586773.5	644	6	8	-2	8	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAGCTCCAAGGATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	80003673	80006602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80003751_80005592_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527
ENSMUSG00000045193.14_80003674_80006971_1	chr10	+	741	7	FSM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	62	518	8	371	multi-exon	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGCCTCGTGACTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	80003673	80006971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80006815
ENSMUSG00000045193.14_80005885_80007141_1	chr10	+	690	5	ISM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	2273	348	2219	-348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTTGGTTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	80005884	80007141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80006815
ENSMUSG00000045193.14_80006061_80007254_1	chr10	+	706	4	ISM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	2449	235	2395	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCAGCTCCCCAGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	80006060	80007254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80006175_80006258_80006341_80006527_80006599_80006815
ENSMUSG00000045193.14_80006061_80007330_1	chr10	+	782	4	ISM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	2449	159	2395	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAGCAGTCCGGGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	80006060	80007330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80006175_80006258_80006341_80006527_80006599_80006815
ENSMUSG00000045193.14_80006317_80007489_1	chr10	+	769	3	ISM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	2705	0	2651	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGACCATTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	80006316	80007489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80006341_80006527_80006599_80006815
ENSMUSG00000045205.17_11265789_11317140_1	chr4	-	1545	13	FSM	ENSMUSG00000045205.17	ENST00000456901.1	1568	13	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAATCTTGACAAATAACA	NA	NA	NA	NA	NA	NA	NA	NA	11317140	11265788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_11265943_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11317072
ENSMUSG00000045210.9_9794244_9817270_1	chr1	-	3015	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	1337	5397	1337	-5397	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTAGATTACTTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	9817270	9794243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_9795576_9807190_9807278_9815674
ENSMUSG00000045211.6_70815397_70816931_1	chr14	+	526	3	FSM	ENSMUSG00000045211.6	ENSMUST00000089049.4	3926	3	320	3080	110	-790	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTCAAGAGCTCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	70815396	70816931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_70815551_70816351_70816566_70816773
ENSMUSG00000045211.6_70816461_70817162_1	chr14	+	494	2	ISM	ENSMUSG00000045211.6	ENSMUST00000228768.2	1578	3	929	559	929	-559	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTGCAACACCTAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	70816460	70817162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_70816566_70816773
ENSMUSG00000045237.6_69429483_69433023_1	chrX	+	1088	3	NNC	ENSMUSG00000045237.6	novel	1094	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTCTAGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	69429482	69433023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_69429758_69431505_69431773_69432477
ENSMUSG00000045251.14_127018139_127021199_1	chr7	-	1001	3	NNC	ENSMUSG00000045251.14	novel	1015	3	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	127021199	127018138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_127018797_127020566_127020691_127020980
ENSMUSG00000045251.14_127018139_127021199_2	chr7	-	1004	3	FSM	ENSMUSG00000045251.14	ENST00000223459.11	978	3	-19	-7	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	127021199	127018138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_127018793_127020559_127020691_127020980
ENSMUSG00000045252.12_24776709_24781957_1	chr7	+	3101	2	FSM	ENSMUSG00000045252.12	ENSMUST00000179556.2	4140	2	79	960	0	52	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGCAATAGAGCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	24776708	24781957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_24776812_24778959
ENSMUSG00000045252.12_24776709_24782012_1	chr7	+	3156	2	FSM	ENSMUSG00000045252.12	ENSMUST00000179556.2	4140	2	79	905	0	107	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTAGTCCAGTTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	24776708	24782012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_24776812_24778959
ENSMUSG00000045273.9_100896182_100912407_1	chr13	-	1245	9	NNC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGGACTGGAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	100912407	100896181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100908162_100908206_100909233_100909290_100912194
ENSMUSG00000045275.18_95961025_95974990_1	chr16	-	405	5	ISM	ENSMUSG00000045275.18	ENST00000288350.8	1384	7	5150	50	5150	-50	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAAACTCCTAGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	95974990	95961024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_95961065_95963182_95963301_95963758_95963863_95965115_95965201_95974932
ENSMUSG00000045275.18_95963260_95977018_1	chr16	-	434	5	ISM	ENSMUSG00000045275.18	ENST00000288350.8	1384	7	3122	2285	3122	-2285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGAAACAAACCATGATA	NA	NA	NA	NA	NA	NA	NA	NA	95977018	95963259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_95963301_95963758_95963863_95965115_95965201_95974932_95975071_95976952
ENSMUSG00000045275.18_95963844_95977131_1	chr16	-	421	4	ISM	ENSMUSG00000045275.18	ENST00000288350.8	1384	7	3009	2869	3009	-2869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGCGGACAGGAAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	95977131	95963843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_95963863_95965115_95965201_95974932_95975071_95976952
ENSMUSG00000045275.18_95965178_95977261_1	chr16	-	470	3	ISM	ENSMUSG00000045275.18	ENST00000288350.8	1384	7	2879	4203	2879	-4203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAACATCTATACGAATC	NA	NA	NA	NA	NA	NA	NA	NA	95977261	95965177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_95965201_95974932_95975071_95976952
ENSMUSG00000045275.18_95975036_95977364_1	chr16	-	447	2	ISM	ENSMUSG00000045275.18	ENST00000288350.8	1384	7	2776	14061	2776	1178	internal_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTCGACAGCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	95977364	95975035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_95975071_95976952
ENSMUSG00000045275.18_95976214_95977234_1	chr16	-	329	2	ISM	ENSMUSG00000045275.18	ENST00000485895.6	896	3	2906	0	2906	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTAAAATCTGGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	95977234	95976213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_95976255_95976946
ENSMUSG00000045275.18_95977186_95979898_1	chr16	-	374	2	ISM	ENSMUSG00000045275.18	ENST00000485895.6	896	3	242	972	242	-972	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACCAGAATGAGGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	95979898	95977185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_95977468_95979806
ENSMUSG00000045275.18_95977291_95979957_1	chr16	-	328	2	ISM	ENSMUSG00000045275.18	ENST00000485895.6	896	3	183	1077	183	-1077	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCTGCCATAGAAAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	95979957	95977290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_95977468_95979806
ENSMUSG00000045275.18_95977364_95980066_1	chr16	-	364	2	ISM	ENSMUSG00000045275.18	ENST00000485895.6	896	3	74	1150	74	-1150	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTCAGCCAGGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	95980066	95977363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_95977468_95979806
ENSMUSG00000045294.12_28276361_28282890_1	chr5	+	1927	5	FSM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	0	770	0	626	multi-exon	FALSE	canonical	NA	NA	NA	NA	1522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAATACTGTGTCAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	28276360	28282890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
ENSMUSG00000045294.12_28276729_28283228_1	chr5	+	1897	5	FSM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	368	432	111	-432	multi-exon	FALSE	canonical	NA	NA	NA	NA	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTGTGCTAGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	28276728	28283228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
ENSMUSG00000045294.12_28279515_28283418_1	chr5	+	1862	3	ISM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	3154	242	2897	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGGAAATAAATGTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	28279514	28283418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_28279647_28280059_28280160_28281788
ENSMUSG00000045294.12_28280059_28283660_1	chr5	+	1973	2	ISM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	3698	0	3441	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	28280058	28283660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_28280160_28281788
ENSMUSG00000045302.14_31112387_31117596_1	chr5	-	1826	8	NNC	ENSMUSG00000045302.14	novel	1721	8	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	31117596	31112386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115576_31115702_31115815_31115896_31116059_31116281_31116566_31116757_31117314
ENSMUSG00000045302.14_31112387_31117596_2	chr5	-	1822	8	NNC	ENSMUSG00000045302.14	novel	1721	8	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	31117596	31112386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115576_31115702_31115814_31115896_31116059_31116281_31116571_31116757_31117314
ENSMUSG00000045302.14_31112387_31117596_3	chr5	-	1827	8	FSM	ENSMUSG00000045302.14	ENST00000406567.7	1721	8	-86	-20	28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	31117596	31112386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_31113082_31113273_31113434_31113605_31113679_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
ENSMUSG00000045302.14_31112387_31117596_4	chr5	-	1821	8	NNC	ENSMUSG00000045302.14	novel	1721	8	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	31117596	31112386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115576_31115702_31115814_31115888_31116057_31116281_31116566_31116757_31117314
ENSMUSG00000045302.14_31112387_31117596_5	chr5	-	1829	8	NNC	ENSMUSG00000045302.14	novel	1721	8	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	31117596	31112386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115576_31115702_31115814_31115896_31116057_31116281_31116566_31116757_31117314
ENSMUSG00000045302.14_31112387_31117596_6	chr5	-	1824	8	NNC	ENSMUSG00000045302.14	novel	1721	8	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	31117596	31112386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117317
ENSMUSG00000045312.13_94310758_94329046_1	chr13	+	1080	2	FSM	ENSMUSG00000045312.13	ENSMUST00000121618.2	4209	2	258	2871	258	-1979	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATGTTGTCTTACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	94310757	94329046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_94311147_94328355
ENSMUSG00000045374.19_75335575_75339986_1	chr11	-	1253	5	ISM	ENSMUSG00000045374.19	ENSMUST00000173320.8	6908	10	5557	3805	5557	-3797	internal_fragment	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCGACTCCACTCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	75339986	75335574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75335670_75336229_75336920_75338689_75338856_75338948_75339115_75339850
ENSMUSG00000045374.19_75336648_75345543_1	chr11	-	1200	7	ISM	ENSMUSG00000045374.19	ENST00000419248.5	3140	10	58	4870	0	-4870	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTAGCGGAGGCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	75345543	75336647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75336920_75338689_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75345437
ENSMUSG00000045410.19_4642862_4647535_1	chr13	-	728	5	ISM	ENSMUSG00000045410.19	ENSMUST00000110691.10	3288	9	11638	2106	5263	393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAAGATTTGAGAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	4647535	4642861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483
ENSMUSG00000045410.19_4643164_4652751_1	chr13	-	745	8	ISM	ENSMUSG00000045410.19	ENSMUST00000110691.10	3288	9	6422	2408	47	91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACAGCACCAGACACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	4652751	4643163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679
ENSMUSG00000045410.19_4643228_4652796_1	chr13	-	726	8	ISM	ENSMUSG00000045410.19	ENSMUST00000110691.10	3288	9	6377	2472	2	27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGCAGAACCAGATCACC	NA	NA	NA	NA	NA	NA	NA	NA	4652796	4643227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679
ENSMUSG00000045410.19_4643252_4645153_1	chr13	-	213	3	ISM	ENSMUSG00000045410.19	ENST00000334019.4	598	6	7645	-3	7645	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTCACTCGCCATCATC	NA	NA	NA	NA	NA	NA	NA	NA	4645153	4643251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_4643298_4643560_4643644_4645069
ENSMUSG00000045410.19_4643561_4648893_1	chr13	-	290	3	NNC	ENSMUSG00000045410.19	novel	598	6	NA	NA	3905	-306	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	470	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCCGTCTCCTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	4648893	4643560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_4643644_4645071_4645154_4648768
ENSMUSG00000045410.19_4643561_4648893_2	chr13	-	292	3	ISM	ENSMUSG00000045410.19	ENST00000334019.4	598	6	3905	306	3905	-306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCCGTCTCCTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	4648893	4643560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_4643644_4645069_4645154_4648768
ENSMUSG00000045410.19_4643595_4657519_1	chr13	-	752	8	ISM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	1654	2846	1654	-340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACAAGAACCTCCGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	4657519	4643594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389
ENSMUSG00000045410.19_4643623_4651241_1	chr13	-	253	4	ISM	ENSMUSG00000045410.19	ENST00000334019.4	598	6	1557	368	1557	-368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGATATGGAGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	4651241	4643622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_4643644_4645069_4645154_4648768_4648892_4651216
ENSMUSG00000045410.19_4648843_4652721_1	chr13	-	237	3	ISM	ENSMUSG00000045410.19	ENST00000334019.4	598	6	77	5588	77	-5588	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACTTTAACCATGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	4652721	4648842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_4648892_4651216_4651353_4652669
ENSMUSG00000045411.17_43896146_43901055_1	chr7	+	1294	6	FSM	ENSMUSG00000045411.17	ENSMUST00000055858.14	1982	6	0	688	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGCCCAAGTGGACATT	NA	NA	NA	NA	NA	NA	NA	NA	43896145	43901055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_43896248_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_43896655_43901739_1	chr7	+	2057	5	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	-211	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	43896654	43901739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_43896841_43898926_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_43896655_43901739_2	chr7	+	2050	5	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	-211	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	43896654	43901739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43900016
ENSMUSG00000045414.8_94401643_94419250_1	chr9	-	1650	3	FSM	ENSMUSG00000045414.8	ENST00000495414.5	1650	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAAAACGTCACTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	94419250	94401642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_94402700_94406444_94406749_94418961
ENSMUSG00000045414.8_94402256_94419426_1	chr9	-	903	3	FSM	ENSMUSG00000045414.8	ENSMUST00000113028.2	3950	3	708	2339	-176	-613	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGATAGATCTTACGTT	NA	NA	NA	NA	NA	NA	NA	NA	94419426	94402255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_94402700_94406444_94406749_94419271
ENSMUSG00000045414.8_94402409_94419614_1	chr9	-	938	3	FSM	ENSMUSG00000045414.8	ENSMUST00000113028.2	3950	3	520	2492	-364	-766	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGGCTATCTGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	94419614	94402408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_94402700_94406444_94406749_94419271
ENSMUSG00000045427.14_133502035_133507181_1	chrX	+	1742	4	FSM	ENSMUSG00000045427.14	ENSMUST00000059297.6	2364	4	0	622	0	48	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAACAAAAATTTAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	133502034	133507181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_133502083_133503440_133503512_133503666_133503712_133505603
ENSMUSG00000045427.14_133503439_133506576_1	chrX	+	1046	2	ISM	ENSMUSG00000045427.14	ENSMUST00000074950.11	2426	3	1511	1227	1404	-557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTCACCTCTTAATC	NA	NA	NA	NA	NA	NA	NA	NA	133503438	133506576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_133503512_133505603
ENSMUSG00000045435.10_21087189_21091602_2	chr5	+	881	2	FSM	ENSMUSG00000045435.10	ENSMUST00000115259.3	1147	2	0	266	0	-266	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGGATATAATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	21087188	21091602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_21087654_21091186
ENSMUSG00000045435.10_21087505_21091868_2	chr5	+	831	2	FSM	ENSMUSG00000045435.10	ENSMUST00000115259.3	1147	2	316	0	316	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCACATGCCTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	21087504	21091868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_21087654_21091186
ENSMUSG00000045438.13_139322682_139328383_1	chr5	-	1515	2	ISM	ENSMUSG00000045438.13	ENSMUST00000049630.13	2461	3	2605	738	2605	-738	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGGTAGTAAGTAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	139328383	139322681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_139324131_139328317
ENSMUSG00000045438.13_139322792_139330920_1	chr5	-	1545	3	FSM	ENSMUSG00000045438.13	ENSMUST00000049630.13	2461	3	68	848	68	-848	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCAGAATGCCAGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	139330920	139322791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_139324131_139328317_139328430_139330826
ENSMUSG00000045464.6_94236662_94241615_1	chr2	+	1462	2	FSM	ENSMUSG00000045464.6	ENSMUST00000152313.2	2040	2	166	412	166	-412	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTAGGCTTGGCAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	94236661	94241615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_94237312_94240803
ENSMUSG00000045466.19_47930381_47940975_1	chr6	+	1445	5	FSM	ENSMUSG00000045466.19	ENSMUST00000101445.11	2761	5	57	1259	57	-1259	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCACGCACAAGCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	47930380	47940975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_47930517_47932750_47933105_47934409_47934537_47939458_47939567_47940255
ENSMUSG00000045466.19_47932844_47941194_1	chr6	+	1435	4	ISM	ENSMUSG00000045466.19	ENSMUST00000101445.11	2761	5	2520	1040	2520	-1040	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTTCTCCAGTGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	47932843	47941194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_47933105_47934409_47934537_47939458_47939567_47940255
ENSMUSG00000045467.14_79897136_79908105_1	chr7	+	1626	11	ISM	ENSMUSG00000045467.14	ENST00000438251.3	2461	14	105	1961	105	-1961	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCAGGGGTGTGGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	79897135	79908105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79897300_79898042_79898084_79899867_79899987_79902248_79902380_79902788_79902946_79903326_79903471_79903829_79903916_79904218_79904451_79905059_79905245_79906592_79906779_79907924
ENSMUSG00000045467.14_79897266_79908418_1	chr7	+	1524	12	ISM	ENSMUSG00000045467.14	ENST00000438251.3	2461	14	235	1648	235	-1648	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCAGGACATCGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	79897265	79908418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79897300_79898042_79898084_79899867_79899987_79902248_79902380_79902788_79902946_79903326_79903471_79903829_79903916_79904218_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390
ENSMUSG00000045467.14_79899867_79908570_1	chr7	+	1602	10	ISM	ENSMUSG00000045467.14	ENST00000438251.3	2461	14	2836	1496	2836	-1496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGTCCCTGCGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	79899866	79908570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79899987_79902248_79902380_79902788_79902946_79903326_79903471_79903829_79903916_79904218_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390
ENSMUSG00000045467.14_79899944_79909173_1	chr7	+	1561	11	ISM	ENSMUSG00000045467.14	ENST00000438251.3	2461	14	2913	893	2913	-893	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCCCATTGGTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	79899943	79909173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79899987_79902248_79902380_79902788_79902946_79903326_79903471_79903829_79903916_79904218_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390_79908571_79909137
ENSMUSG00000045467.14_79902283_79909212_1	chr7	+	1523	10	ISM	ENSMUSG00000045467.14	ENST00000438251.3	2461	14	5252	854	5252	-854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATCCCTCCTCATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	79902282	79909212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79902380_79902788_79902946_79903326_79903471_79903829_79903916_79904218_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390_79908571_79909137
ENSMUSG00000045467.14_79902342_79909259_1	chr7	+	1511	10	ISM	ENSMUSG00000045467.14	ENST00000438251.3	2461	14	5311	807	5311	-807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGGATCTTAGGGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	79902341	79909259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79902380_79902788_79902946_79903326_79903471_79903829_79903916_79904218_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390_79908571_79909137
ENSMUSG00000045467.14_79902789_79909378_1	chr7	+	1592	9	ISM	ENSMUSG00000045467.14	ENST00000438251.3	2461	14	5758	688	5758	-688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTCAATGAAGAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	79902788	79909378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79902946_79903326_79903471_79903829_79903916_79904218_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390_79908571_79909137
ENSMUSG00000045467.14_79903325_79909946_1	chr7	+	1626	9	ISM	ENSMUSG00000045467.14	ENST00000438251.3	2461	14	6294	120	6294	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGCACCTTGCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	79903324	79909946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79903471_79903829_79903916_79904218_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390_79908571_79909137_79909442_79909820
ENSMUSG00000045467.14_79903829_79910066_1	chr7	+	1601	8	ISM	ENSMUSG00000045467.14	ENST00000438251.3	2461	14	6798	0	6798	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAACACAGGTAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	79903828	79910066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79903916_79904218_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390_79908571_79909137_79909442_79909820
ENSMUSG00000045503.17_164299889_164302856_1	chr2	+	303	2	ISM	ENSMUSG00000045503.17	ENSMUST00000109352.8	2001	6	993	4576	993	-4572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATGCCCCTCGGTTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	164299888	164302856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164300018_164302682
ENSMUSG00000045503.17_164302780_164303288_1	chr2	+	337	2	ISM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	-111	4140	-111	-4140	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGGGCCAGTTCCGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	164302779	164303288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164303041_164303212
ENSMUSG00000045519.16_20258855_20263261_1	chr9	-	802	2	FSM	ENSMUSG00000045519.16	ENST00000306908.10	802	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTATGACTGTAAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	20263261	20258854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_20259529_20263133
ENSMUSG00000045545.9_100093988_100095048_1	chr11	-	428	3	ISM	ENSMUSG00000045545.9	ENSMUST00000007272.8	1698	8	3326	0	1432	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCCTCCCTGGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	100095048	100093987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100094236_100094781_100094847_100094933
ENSMUSG00000045545.9_100094096_100095268_1	chr11	-	445	4	ISM	ENSMUSG00000045545.9	ENSMUST00000007272.8	1698	8	3106	108	1212	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGATACTGCTGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	100095268	100094095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100094236_100094781_100094847_100094933_100095155_100095249
ENSMUSG00000045545.9_100094196_100095375_1	chr11	-	452	4	ISM	ENSMUSG00000045545.9	ENSMUST00000007272.8	1698	8	2999	208	1105	-208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCACGATGGCAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	100095375	100094195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100094236_100094781_100094847_100094933_100095155_100095249
ENSMUSG00000045545.9_100094933_100095870_1	chr11	-	601	4	NNC	ENSMUSG00000045545.9	novel	674	5	NA	NA	610	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCCTGGCCCTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	100095870	100094932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_100095155_100095249_100095370_100095458_100095621_100095773
ENSMUSG00000045545.9_100094933_100096478_1	chr11	-	672	5	FSM	ENSMUSG00000045545.9	ENST00000398469.5	674	5	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCCTGGCCCTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	100096478	100094932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100095155_100095249_100095376_100095458_100095621_100095773_100095871_100096413
ENSMUSG00000045545.9_100094933_100096478_2	chr11	-	670	5	NNC	ENSMUSG00000045545.9	novel	674	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCCTGGCCCTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	100096478	100094932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_100095155_100095249_100095376_100095458_100095621_100095773_100095871_100096415
ENSMUSG00000045545.9_100095316_100096507_1	chr11	-	440	4	ISM	ENSMUSG00000045545.9	ENSMUST00000007272.8	1698	8	1867	1328	-27	-383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTCTGAGCTCCGGCG	NA	NA	NA	NA	NA	NA	NA	NA	100096507	100095315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100095376_100095458_100095621_100095773_100095931_100096446
ENSMUSG00000045545.9_100095474_100097833_1	chr11	-	482	4	ISM	ENSMUSG00000045545.9	ENSMUST00000007272.8	1698	8	541	1486	541	-541	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCTTCAGCAAGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	100097833	100095473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100095621_100095773_100095931_100096446_100096530_100097738
ENSMUSG00000045545.9_100095553_100097860_1	chr11	-	430	4	ISM	ENSMUSG00000045545.9	ENSMUST00000007272.8	1698	8	514	1565	514	-620	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTGAGCCGCATCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	100097860	100095552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100095621_100095773_100095931_100096446_100096530_100097738
ENSMUSG00000045545.9_100096472_100098136_1	chr11	-	456	2	ISM	ENSMUSG00000045545.9	ENSMUST00000007272.8	1698	8	238	2484	238	-1539	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCCGATGACTTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	100098136	100096471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100096530_100097738
ENSMUSG00000045576.17_104771961_104798841_1	chr3	+	1380	8	ISM	ENSMUSG00000045576.17	ENSMUST00000106769.8	2428	14	142	35335	142	-35047	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAATAAGAGAAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	104771960	104798841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779
ENSMUSG00000045576.17_104772429_104826805_1	chr3	+	1327	12	ISM	ENSMUSG00000045576.17	ENST00000490067.5	1669	14	94	7083	46	-7083	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGGAAGGCAGTAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	104772428	104826805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_104772625_104775390_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666
ENSMUSG00000045576.17_104772554_104826805_1	chr3	+	1202	12	ISM	ENSMUSG00000045576.17	ENST00000490067.5	1669	14	219	7083	171	-7083	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGGAAGGCAGTAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	104772553	104826805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_104772625_104775390_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666
ENSMUSG00000045576.17_104778282_104833889_1	chr3	+	1228	12	ISM	ENSMUSG00000045576.17	ENST00000490067.5	1669	14	5947	-1	5899	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGATCTCCAGGACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	104778281	104833889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
ENSMUSG00000045594.11_114246127_114259440_1	chr9	+	439	5	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	15983	44005	15983	-44005	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGCTTCCGCTACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	114246126	114259440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380
ENSMUSG00000045594.11_114246176_114259510_1	chr9	+	460	5	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	16032	43935	16032	-43935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTGGGACCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	114246175	114259510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380
ENSMUSG00000045594.11_114249506_114263527_1	chr9	+	462	5	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	19362	39918	19362	-39918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAACTGGGGGTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	114249505	114263527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468
ENSMUSG00000045594.11_114259489_114279713_1	chr9	+	457	6	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	29345	23732	29345	-23732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGGAAAAGTTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	114259488	114279713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664
ENSMUSG00000045594.11_114266858_114285559_1	chr9	+	451	6	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	36714	17886	36714	-17886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTTCACCCTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	114266857	114285559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498
ENSMUSG00000045594.11_114272103_114288767_1	chr9	+	475	5	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	41959	14678	41959	-14678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCAGATTCATCAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	114272102	114288767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661
ENSMUSG00000045594.11_114279680_114293148_1	chr9	+	436	5	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	49536	10297	49536	-10297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCAACTGGACGGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	114279679	114293148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111
ENSMUSG00000045594.11_114283280_114293261_1	chr9	+	465	4	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	53136	10184	53136	-10184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGACCTCATACTCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	114283279	114293261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114283346_114285498_114285616_114288661_114288794_114293111
ENSMUSG00000045594.11_114288697_114302993_1	chr9	+	440	3	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	58553	452	58553	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCACTTCAGCCCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	114288696	114302993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114288794_114293111_114293367_114302905
ENSMUSG00000045594.11_114288735_114303056_1	chr9	+	465	3	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	58591	389	58591	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCCCAGAGCTGTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	114288734	114303056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114288794_114293111_114293367_114302905
ENSMUSG00000045594.11_114293243_114303203_1	chr9	+	422	2	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	63099	242	63099	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTACACGGATCACCT	NA	NA	NA	NA	NA	NA	NA	NA	114293242	114303203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114293367_114302905
ENSMUSG00000045594.11_114293287_114303269_1	chr9	+	444	2	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	63143	176	63143	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGACTTTGCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	114293286	114303269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_114293367_114302905
ENSMUSG00000045598.11_126832427_126835899_1	chr7	+	1696	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	194	1452	0	-1316	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTCTCCTGCGGCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	126832426	126835899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126832659_126834435
ENSMUSG00000045598.11_126832466_126835950_1	chr7	+	1708	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	233	1401	39	-1265	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCGAGTGCAGGGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	126832465	126835950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126832659_126834435
ENSMUSG00000045624.16_139962733_139971180_1	chr2	-	378	4	ISM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	41304	930	41304	-930	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGAAAAAATTCTGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	139971180	139962732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119
ENSMUSG00000045624.16_139965568_139990741_1	chr2	-	386	5	ISM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	21743	3765	21743	-3765	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGGACAGCAAGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	139990741	139965567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672
ENSMUSG00000045624.16_140006372_140009949_1	chr2	-	389	2	ISM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	2535	44569	2535	-44569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTCAGCTGATGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	140009949	140006371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_140006503_140009691
ENSMUSG00000045624.16_140006439_140010011_1	chr2	-	384	2	ISM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	2473	44636	2473	-44636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTCAGATAGTGCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	140010011	140006438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_140006503_140009691
ENSMUSG00000045624.16_140010056_140012484_1	chr2	-	408	2	ISM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	0	48253	0	-48253	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCGAAGCAGAAAAAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	140012484	140010055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_140010376_140012396
ENSMUSG00000045636.17_41451441_41452528_1	chr8	-	116	2	ISM	ENSMUSG00000045636.17	ENST00000634613.1	1208	9	17260	4984	17260	-4984	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAGAATGAGAAGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	41452528	41451440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_41451501_41452472
ENSMUSG00000045636.17_41468436_41469626_1	chr8	-	115	2	ISM	ENSMUSG00000045636.17	ENST00000634613.1	1208	9	162	21979	162	-21979	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGCTAGGTAAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	41469626	41468435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_41468492_41469567
ENSMUSG00000045665.6_102187889_102189977_1	chr15	+	1542	2	FSM	ENSMUSG00000045665.6	ENSMUST00000051341.6	1754	2	0	212	0	-212	multi-exon	FALSE	canonical	NA	NA	NA	NA	1106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATCCTCCAGGACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	102187888	102189977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102188065_102188611
ENSMUSG00000045679.15_17039051_17047844_1	chr12	-	1086	5	ISM	ENSMUSG00000045679.15	ENSMUST00000222203.2	1706	6	2224	352	2112	-352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGAGCCCCATCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	17047844	17039050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_17039897_17042278_17042321_17045614_17045673_17047634_17047705_17047774
ENSMUSG00000045679.15_17039154_17049891_1	chr12	-	1074	6	FSM	ENSMUSG00000045679.15	ENSMUST00000222203.2	1706	6	177	455	65	-455	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCAGTATAACATCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	17049891	17039153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_17039897_17042278_17042321_17045614_17045673_17047634_17047705_17047774_17047858_17049813
ENSMUSG00000045679.15_17039237_17050027_1	chr12	-	1127	6	FSM	ENSMUSG00000045679.15	ENSMUST00000222203.2	1706	6	41	538	41	-538	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCTTCCCACAGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	17050027	17039236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_17039897_17042278_17042321_17045614_17045673_17047634_17047705_17047774_17047858_17049813
ENSMUSG00000045679.15_17039821_17043521_1	chr12	-	186	3	ISM	ENSMUSG00000045679.15	ENSMUST00000054536.11	1928	7	6598	1172	6435	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAAAGCTGAATGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	17043521	17039820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_17039897_17042278_17042321_17043453
ENSMUSG00000045679.15_17039883_17043566_1	chr12	-	169	3	ISM	ENSMUSG00000045679.15	ENSMUST00000054536.11	1928	7	6553	1234	6390	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATCATGTTGGCTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	17043566	17039882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_17039897_17042278_17042321_17043453
ENSMUSG00000045691.15_55332419_55335248_1	chr14	+	1127	3	FSM	ENSMUSG00000045691.15	ENST00000404535.3	1424	3	23	274	23	-274	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATCCCTTGCCACCCCC	NA	NA	NA	NA	NA	NA	NA	NA	55332418	55335248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_55332573_55332902_55333464_55334836
ENSMUSG00000045691.15_55332462_55335369_1	chr14	+	1205	3	FSM	ENSMUSG00000045691.15	ENST00000404535.3	1424	3	66	153	66	-153	multi-exon	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAGGGAAGAGCAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	55332461	55335369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_55332573_55332902_55333464_55334836
ENSMUSG00000045691.15_55332517_55335369_1	chr14	+	1150	3	FSM	ENSMUSG00000045691.15	ENST00000404535.3	1424	3	121	153	121	-153	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAGGGAAGAGCAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	55332516	55335369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_55332573_55332902_55333464_55334836
ENSMUSG00000045691.15_55333032_55335524_1	chr14	+	1120	2	FSM	ENSMUSG00000045691.15	ENSMUST00000050575.9	2830	2	791	919	636	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCATTGTTGAGACCGGT	NA	NA	NA	NA	NA	NA	NA	NA	55333031	55335524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_55333464_55334836
ENSMUSG00000045752.14_142623161_142624415_1	chr7	+	899	3	FSM	ENSMUSG00000045752.14	ENSMUST00000177841.8	1364	3	56	409	56	-349	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTGGAGCTAGCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	142623160	142624415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_142623251_142623491_142623558_142623672
ENSMUSG00000045752.14_142623161_142624464_1	chr7	+	948	3	FSM	ENSMUSG00000045752.14	ENSMUST00000177841.8	1364	3	56	360	56	-300	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCACCAGGGACAGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	142623160	142624464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_142623251_142623491_142623558_142623672
ENSMUSG00000045761.17_71980411_71994670_1	chr17	+	313	3	ISM	ENSMUSG00000045761.17	ENST00000379558.5	3451	20	44	41996	44	-41993	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTTCTTGCTCACGAT	NA	NA	NA	NA	NA	NA	NA	NA	71980410	71994670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71980495_71992048_71992188_71994580
ENSMUSG00000045761.17_71992121_71996261_1	chr17	+	299	3	ISM	ENSMUSG00000045761.17	ENSMUST00000153445.9	3301	20	321	40402	321	-40402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAATGGCTACCCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	71992120	71996261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71992188_71994580_71994695_71996143
ENSMUSG00000045761.17_71994627_71996373_1	chr17	+	298	2	ISM	ENSMUSG00000045761.17	ENSMUST00000153445.9	3301	20	2827	40290	2827	-40290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAAGGACAAACTCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	71994626	71996373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71994695_71996143
ENSMUSG00000045761.17_71996146_71997541_1	chr17	+	307	2	ISM	ENSMUSG00000045761.17	ENSMUST00000153445.9	3301	20	4346	39122	4346	-39122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGAGGGGTTCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	71996145	71997541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71996432_71997520
ENSMUSG00000045761.17_71996271_71997655_1	chr17	+	296	2	ISM	ENSMUSG00000045761.17	ENSMUST00000153445.9	3301	20	4471	39008	4471	-39008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTGCTAAGGAGAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	71996270	71997655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71996432_71997520
ENSMUSG00000045761.17_71996396_71998505_1	chr17	+	313	3	ISM	ENSMUSG00000045761.17	ENSMUST00000153445.9	3301	20	4596	38158	4596	-38158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGATCCCACCCATTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	71996395	71998505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71996432_71997520_71997733_71998440
ENSMUSG00000045761.17_71998439_72004894_1	chr17	+	307	3	ISM	ENSMUSG00000045761.17	ENSMUST00000153445.9	3301	20	6639	31769	6639	-31769	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACAGTCTACCTTTACTC	NA	NA	NA	NA	NA	NA	NA	NA	71998438	72004894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71998632_72002691_72002739_72004827
ENSMUSG00000045761.17_71998569_72007538_1	chr17	+	313	4	ISM	ENSMUSG00000045761.17	ENSMUST00000153445.9	3301	20	6769	29125	6769	-29125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCTGAAGCAGATGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	71998568	72007538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71998632_72002691_72002739_72004827_72004992_72007499
ENSMUSG00000045761.17_72007583_72011746_1	chr17	+	297	3	ISM	ENSMUSG00000045761.17	ENSMUST00000153445.9	3301	20	15783	24917	15783	-24917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCTTCGGGCTCTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	72007582	72011746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_72007651_72007874_72008040_72011682
ENSMUSG00000045761.17_72011801_72014254_1	chr17	+	323	3	ISM	ENSMUSG00000045761.17	ENSMUST00000153445.9	3301	20	20001	22409	20001	-22409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAACGTGACCCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	72011800	72014254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_72011837_72012773_72012880_72014073
ENSMUSG00000045761.17_72016539_72021752_1	chr17	+	322	3	ISM	ENSMUSG00000045761.17	ENSMUST00000153445.9	3301	20	24739	14911	24739	-14911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTCATGAGGGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	72016538	72021752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_72016663_72021230_72021349_72021672
ENSMUSG00000045761.17_72021236_72023407_1	chr17	+	299	3	ISM	ENSMUSG00000045761.17	ENST00000379558.5	3451	20	40869	13259	29436	-13256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGTTGGAGGCCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	72021235	72023407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_72021349_72021672_72021768_72023316
ENSMUSG00000045767.10_55841087_55847508_1	chr13	+	697	2	FSM	ENSMUSG00000045767.10	ENSMUST00000057844.10	4652	2	150	3805	150	-3805	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTAATTTGACATGCT	NA	NA	NA	NA	NA	NA	NA	NA	55841086	55847508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_55841161_55846885
ENSMUSG00000045775.16_115353390_115360972_1	chr11	+	1189	3	NNC	ENSMUSG00000045775.16	novel	1158	3	NA	NA	-41	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2786	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAGAGCCTGGGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	115353389	115360972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_115353634_115355739_115355874_115360161
ENSMUSG00000045775.16_115353390_115360974_1	chr11	+	1201	3	FSM	ENSMUSG00000045775.16	ENST00000329783.9	1158	3	-41	-2	-41	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGCCTGGGAGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	115353389	115360974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115353634_115355739_115355884_115360161
ENSMUSG00000045775.16_115353547_115360972_1	chr11	+	1036	3	NNC	ENSMUSG00000045775.16	novel	1158	3	NA	NA	116	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAGAGCCTGGGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	115353546	115360972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_115353628_115355739_115355884_115360161
ENSMUSG00000045775.16_115353547_115360974_1	chr11	+	1044	3	FSM	ENSMUSG00000045775.16	ENST00000329783.9	1158	3	116	-2	116	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGCCTGGGAGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	115353546	115360974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115353634_115355739_115355884_115360161
ENSMUSG00000045777.15_141909379_141937278_1	chr7	-	1774	8	NNC	ENSMUSG00000110040.2	novel	1781	8	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGGGAGCTCCCGAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	141937278	141909378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_141909852_141924594_141925048_141930569_141930669_141930762_141930901_141931069_141931193_141934502_141934696_141936276_141936448_141937154
ENSMUSG00000045777.15_141909379_141937278_2	chr7	-	1780	8	NNC	ENSMUSG00000110040.2	novel	1781	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGGGAGCTCCCGAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	141937278	141909378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_141909852_141924595_141925048_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934696_141936276_141936448_141937154
ENSMUSG00000045777.15_141909379_141937278_3	chr7	-	1781	8	FSM	ENSMUSG00000110040.2	ENST00000636615.1	1781	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGGGAGCTCCCGAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	141937278	141909378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_141909852_141924594_141925048_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934696_141936276_141936448_141937154
ENSMUSG00000045790.11_52533192_52578184_1	chr5	-	1718	9	NNC	ENSMUSG00000045790.11	novel	1932	11	NA	NA	18395	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGGTTTGTTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	52578184	52533191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_52534021_52542446_52542564_52550012_52550090_52557426_52557572_52560048_52560134_52561458_52561519_52562373_52562551_52563317_52563435_52578073
ENSMUSG00000045790.11_52533192_52596480_2	chr5	-	1870	12	ISM	ENSMUSG00000045790.11	ENST00000635206.2	2177	13	32441	-4	99	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGGTTTGTTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	52596480	52533191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_52534021_52542446_52542564_52548430_52548464_52550012_52550090_52557426_52557572_52560048_52560134_52561458_52561522_52562373_52562551_52563317_52563435_52578073_52578182_52593039_52593079_52596400
ENSMUSG00000045790.11_52533192_52596480_3	chr5	-	1837	11	FSM	ENSMUSG00000045790.11	ENST00000389609.8	1932	11	99	-4	99	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGGTTTGTTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	52596480	52533191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_52534021_52542446_52542564_52550012_52550090_52557426_52557572_52560048_52560134_52561458_52561522_52562373_52562551_52563317_52563435_52578073_52578182_52593039_52593079_52596400
ENSMUSG00000045790.11_52533192_52596480_5	chr5	-	1865	12	NNC	ENSMUSG00000045790.11	novel	2177	13	NA	NA	99	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGGTTTGTTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	52596480	52533191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_52534021_52542446_52542564_52548430_52548464_52550012_52550090_52557426_52557567_52560048_52560134_52561458_52561522_52562373_52562551_52563317_52563435_52578073_52578182_52593039_52593079_52596400
ENSMUSG00000045790.11_52533192_52596480_6	chr5	-	1866	12	NNC	ENSMUSG00000045790.11	novel	2177	13	NA	NA	99	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGGTTTGTTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	52596480	52533191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_52534021_52542446_52542564_52548430_52548464_52550012_52550090_52557426_52557572_52560048_52560134_52561458_52561522_52562373_52562547_52563317_52563435_52578073_52578182_52593039_52593079_52596400
ENSMUSG00000045790.11_52533192_52596564_1	chr5	-	1942	11	NNC	ENSMUSG00000045790.11	novel	1932	11	NA	NA	15	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGGTTTGTTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	52596564	52533191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_52534021_52542446_52542564_52549991_52550090_52557426_52557572_52560048_52560134_52561458_52561522_52562373_52562551_52563317_52563435_52578073_52578182_52593039_52593079_52596400
ENSMUSG00000045790.11_52533192_52596564_2	chr5	-	1946	12	NNC	ENSMUSG00000045790.11	novel	2177	13	NA	NA	15	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGGTTTGTTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	52596564	52533191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_52534021_52542446_52542564_52548430_52548464_52550012_52550082_52557426_52557572_52560048_52560134_52561458_52561522_52562373_52562551_52563317_52563435_52578073_52578182_52593039_52593079_52596400
ENSMUSG00000045790.11_52533192_52596564_4	chr5	-	1951	12	NNC	ENSMUSG00000045790.11	novel	2177	13	NA	NA	15	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGGTTTGTTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	52596564	52533191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_52534021_52542446_52542564_52548430_52548464_52550012_52550090_52557426_52557572_52560048_52560134_52561458_52561519_52562373_52562551_52563317_52563435_52578073_52578182_52593039_52593079_52596400
ENSMUSG00000045790.11_52533192_52628825_1	chr5	-	2052	12	FSM	ENSMUSG00000045790.11	ENST00000504487.5	1981	12	-67	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGGTTTGTTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	52628825	52533191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_52534021_52542446_52542564_52550012_52550090_52557426_52557572_52560048_52560134_52561458_52561522_52562373_52562551_52563317_52563435_52578073_52578182_52593039_52593079_52596400_52596563_52628692
ENSMUSG00000045790.11_52533369_52596564_2	chr5	-	1744	11	FSM	ENSMUSG00000045790.11	ENST00000389609.8	1932	11	15	173	15	-173	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTATGTCTGCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	52596564	52533368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_52534021_52542446_52542564_52550012_52550090_52557426_52557572_52560048_52560134_52561458_52561522_52562373_52562551_52563317_52563435_52578073_52578182_52593039_52593079_52596400
ENSMUSG00000045790.11_52533369_52628825_1	chr5	-	1904	13	NNC	ENSMUSG00000045790.11	novel	2177	13	NA	NA	0	-173	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTATGTCTGCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	52628825	52533368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_52534021_52542446_52542564_52548430_52548464_52550012_52550090_52557426_52557572_52560048_52560134_52561458_52561522_52562373_52562547_52563317_52563435_52578073_52578182_52593039_52593079_52596400_52596563_52628692
ENSMUSG00000045790.11_52533369_52628825_3	chr5	-	1908	13	FSM	ENSMUSG00000045790.11	ENST00000635206.2	2177	13	96	173	0	-173	multi-exon	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTATGTCTGCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	52628825	52533368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_52534021_52542446_52542564_52548430_52548464_52550012_52550090_52557426_52557572_52560048_52560134_52561458_52561522_52562373_52562551_52563317_52563435_52578073_52578182_52593039_52593079_52596400_52596563_52628692
ENSMUSG00000045790.11_52533369_52628825_5	chr5	-	1905	13	NNC	ENSMUSG00000045790.11	novel	2177	13	NA	NA	0	-173	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTATGTCTGCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	52628825	52533368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_52534021_52542446_52542564_52548430_52548464_52550012_52550090_52557426_52557572_52560048_52560134_52561458_52561519_52562373_52562551_52563317_52563435_52578073_52578182_52593039_52593079_52596400_52596563_52628692
ENSMUSG00000045795.11_81221040_81239174_1	chr7	+	1351	6	ISM	ENSMUSG00000045795.11	ENST00000611636.4	1558	8	-38	2639	0	-2639	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAACAGAGAGCTGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	81221039	81239174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_81221658_81224293_81224451_81227898_81228050_81234849_81235020_81235881_81236048_81239085
ENSMUSG00000045795.11_81221309_81241813_1	chr7	+	1327	8	FSM	ENSMUSG00000045795.11	ENST00000611636.4	1558	8	231	0	231	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAAACCCTTGAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	81221308	81241813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_81221658_81224293_81224451_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754
ENSMUSG00000045817.9_84492290_84495111_1	chr17	-	2335	2	FSM	ENSMUSG00000045817.9	ENSMUST00000060366.7	3530	2	264	931	264	-931	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGATATATATTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	84495111	84492289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_84494585_84495071
ENSMUSG00000045817.9_84492477_84495375_1	chr17	-	2412	2	FSM	ENSMUSG00000045817.9	ENSMUST00000060366.7	3530	2	0	1118	0	-1118	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGCTATGGGCAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	84495375	84492476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_84494585_84495071
ENSMUSG00000045822.5_164647227_164662879_1	chr2	+	1328	2	FSM	ENSMUSG00000045822.5	ENSMUST00000052107.5	2708	2	209	1171	209	-1171	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGAATTTGTGGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	164647226	164662879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_164647352_164661676
ENSMUSG00000045827.11_33188524_33200362_1	chr13	+	1821	7	FSM	ENSMUSG00000045827.11	ENSMUST00000006391.5	3397	7	0	1576	0	-1576	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTTTAGTAATGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	33188523	33200362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_33188679_33190515_33190694_33191988_33192127_33192750_33192869_33194669_33194813_33197844_33198001_33199429
ENSMUSG00000045827.11_33190606_33200556_1	chr13	+	1770	6	ISM	ENSMUSG00000045827.11	ENSMUST00000006391.5	3397	7	2082	1382	2082	-1382	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCACCAATCTTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	33190605	33200556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_33190694_33191988_33192127_33192750_33192869_33194669_33194813_33197844_33198001_33199429
ENSMUSG00000045827.11_33192780_33200822_1	chr13	+	1781	4	ISM	ENSMUSG00000045827.11	ENSMUST00000006391.5	3397	7	4256	1116	4256	-1116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGTTTGAATTAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	33192779	33200822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_33192869_33194669_33194813_33197844_33198001_33199429
ENSMUSG00000045827.11_33197876_33201051_1	chr13	+	1747	2	ISM	ENSMUSG00000045827.11	ENSMUST00000006391.5	3397	7	9352	887	9352	-887	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAGAAGGAGAGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	33197875	33201051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_33198001_33199429
ENSMUSG00000045827.11_33197932_33201108_1	chr13	+	1748	2	ISM	ENSMUSG00000045827.11	ENSMUST00000006391.5	3397	7	9408	830	9408	-830	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGATGCTTGCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	33197931	33201108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_33198001_33199429
ENSMUSG00000045867.11_95010608_95159863_1	chr10	-	1554	3	FSM	ENSMUSG00000045867.11	ENSMUST00000053594.7	1661	3	107	0	107	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTGCGTGTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	95159863	95010607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_95011841_95158447_95158752_95159846
ENSMUSG00000045948.9_28439428_28441245_1	chr7	-	361	3	FSM	ENSMUSG00000045948.9	ENSMUST00000056078.9	722	3	0	361	0	-361	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGGAGGGCCACACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	28441245	28439427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28439665_28440911_28440980_28441189
ENSMUSG00000045954.8_51328638_51339875_1	chr1	+	458	2	FSM	ENSMUSG00000045954.8	ENSMUST00000051572.8	3055	2	353	2244	353	-2244	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTTGCTGATGAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	51328637	51339875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_51329028_51339807
ENSMUSG00000045969.9_11606299_11611755_1	chr8	+	410	2	FSM	ENSMUSG00000045969.9	ENST00000375775.3	1031	2	39	582	39	-582	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAGAGAACGCGTCGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	11606298	11611755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_11606371_11611417
ENSMUSG00000045969.9_11606299_11611755_2	chr8	+	408	2	NNC	ENSMUSG00000045969.9	novel	1031	2	NA	NA	39	-582	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAGAGAACGCGTCGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	11606298	11611755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_11606371_11611419
ENSMUSG00000045969.9_11608429_11612900_1	chr8	+	1621	2	FSM	ENSMUSG00000045969.9	ENSMUST00000209565.2	1971	2	0	350	0	-349	multi-exon	FALSE	canonical	NA	NA	NA	NA	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTAGCATTTAATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	11608428	11612900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_11608567_11611417
ENSMUSG00000045969.9_11608429_11612954_1	chr8	+	1675	2	FSM	ENSMUSG00000045969.9	ENSMUST00000209565.2	1971	2	0	296	0	-295	multi-exon	FALSE	canonical	NA	NA	NA	NA	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACACCAGCAGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	11608428	11612954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_11608567_11611417
ENSMUSG00000045969.9_11608551_11613016_1	chr8	+	1615	2	FSM	ENSMUSG00000045969.9	ENSMUST00000209565.2	1971	2	122	234	122	-233	multi-exon	FALSE	canonical	NA	NA	NA	NA	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGTAGGCATTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	11608550	11613016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_11608567_11611417
ENSMUSG00000045973.19_45399113_45408760_1	chr4	-	1242	3	FSM	ENSMUSG00000045973.19	ENSMUST00000107796.8	4433	3	1	3190	0	128	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAGAACAGAGTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	45408760	45399112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_45400180_45404726_45404836_45408694
ENSMUSG00000045983.17_20491573_20498145_1	chr16	+	1025	10	ISM	ENSMUSG00000045983.17	ENST00000346169.7	5394	33	15	13488	0	-13153	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGATACCAATGTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	20491572	20498145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962
ENSMUSG00000045983.17_20492564_20505307_1	chr16	+	3707	23	ISM	ENSMUSG00000045983.17	ENST00000435046.7	5032	33	1045	5991	297	-5991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	845	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGTCTGTGGATGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	20492563	20505307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20492712_20492977_20493065_20494093_20494205_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262
ENSMUSG00000045983.17_20492975_20498335_1	chr16	+	1013	7	ISM	ENSMUSG00000045983.17	ENSMUST00000115461.8	5507	32	805	13298	708	-12963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGAAACTCATGAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	20492974	20498335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962
ENSMUSG00000045983.17_20498556_20511298_1	chr16	+	3609	24	ISM	ENSMUSG00000045983.17	ENSMUST00000115460.8	5638	32	6289	333	6289	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	852	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATGTGTCTTGAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	20498555	20511298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ENSMUSG00000045983.17_20500168_20502666_1	chr16	+	1034	6	ISM	ENSMUSG00000045983.17	ENSMUST00000115460.8	5638	32	7901	8965	7901	-8632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTCCTCTTCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	20500167	20502666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561
ENSMUSG00000045983.17_20500789_20504363_1	chr16	+	1054	7	ISM	ENSMUSG00000045983.17	ENSMUST00000115460.8	5638	32	8522	7268	8522	-6935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGAGGCCACTGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	20500788	20504363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260
ENSMUSG00000045983.17_20500918_20504678_1	chr16	+	995	8	ISM	ENSMUSG00000045983.17	ENSMUST00000115460.8	5638	32	8651	6953	8651	-6620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGATAACAGACGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	20500917	20504678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608
ENSMUSG00000045983.17_20501505_20505020_1	chr16	+	974	8	ISM	ENSMUSG00000045983.17	ENSMUST00000115460.8	5638	32	9238	6611	9238	-6278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGAAGTTTTAGCAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	20501504	20505020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900
ENSMUSG00000045983.17_20503158_20506212_1	chr16	+	1028	8	ISM	ENSMUSG00000045983.17	ENSMUST00000115460.8	5638	32	10891	5419	10891	-5086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTGAACCTTTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	20503157	20506212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130
ENSMUSG00000045983.17_20504607_20507615_1	chr16	+	1060	8	ISM	ENSMUSG00000045983.17	ENSMUST00000115460.8	5638	32	12340	4016	12340	-3683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTTCGTGGATATG	NA	NA	NA	NA	NA	NA	NA	NA	20504606	20507615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480
ENSMUSG00000045983.17_20504899_20507802_1	chr16	+	1045	8	ISM	ENSMUSG00000045983.17	ENSMUST00000115460.8	5638	32	12632	3829	12632	-3496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCAGGGGAGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	20504898	20507802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720
ENSMUSG00000045983.17_20507479_20511633_1	chr16	+	997	4	ISM	ENSMUSG00000045983.17	ENSMUST00000115460.8	5638	32	15212	-2	15212	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	20507478	20511633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20507616_20507720_20507803_20507941_20508083_20510996
ENSMUSG00000045996.13_36174179_36177039_1	chr15	+	352	4	FSM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	23	114	0	-114	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAATACAATTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	36174178	36177039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_36174228_36175132_36175203_36175529_36175623_36176899
ENSMUSG00000046027.18_83281224_83291536_1	chr7	+	2426	6	FSM	ENSMUSG00000046027.18	ENSMUST00000075418.15	2483	6	57	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGAGTTCCTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	83281223	83291536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289629
ENSMUSG00000046032.17_100257093_100266047_1	chrX	-	779	4	FSM	ENSMUSG00000046032.17	ENSMUST00000120389.8	2415	4	108	1528	108	-1528	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATACCAGAAGGCTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	100266047	100257092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_100257471_100258006_100258132_100259088_100259185_100265867
ENSMUSG00000046034.9_27606005_27616477_1	chr15	-	1007	4	ISM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	14302	0	14302	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGTTTTGTATTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	27616477	27606004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409
ENSMUSG00000046034.9_27606229_27619683_1	chr15	-	928	5	ISM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	11096	224	11096	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTGAAGACTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	27619683	27606228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614
ENSMUSG00000046034.9_27606383_27630580_1	chr15	-	914	7	FSM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	199	378	199	-378	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGAGTGTGTGAGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	27630580	27606382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623445_27630543
ENSMUSG00000046034.9_27606439_27630642_1	chr15	-	920	7	FSM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	137	434	137	-434	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTGGCCAATGGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	27630642	27606438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623445_27630543
ENSMUSG00000046034.9_27606501_27630764_1	chr15	-	980	7	FSM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	15	496	15	-496	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCGGCTGTCCAAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	27630764	27606500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623445_27630543
ENSMUSG00000046079.17_105848732_105961639_1	chr5	+	2415	3	FSM	ENSMUSG00000046079.17	ENSMUST00000120847.8	3929	3	77	1437	77	-1437	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCGACTGACTTGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	105848731	105961639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_105848952_105880095_105880241_105959589
ENSMUSG00000046152.17_31685040_31750036_1	chr8	+	1478	4	FSM	ENSMUSG00000046152.17	ENST00000524021.1	1909	4	30	401	30	-401	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGAGAGCTGTGGCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	31685039	31750036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_31685278_31691237_31691533_31725622_31726459_31749927
ENSMUSG00000046152.17_31685085_31750103_1	chr8	+	1500	4	FSM	ENSMUSG00000046152.17	ENST00000524021.1	1909	4	75	334	75	-334	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAGGAATCAAAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	31685084	31750103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_31685278_31691237_31691533_31725622_31726459_31749927
ENSMUSG00000046152.17_31685169_31750165_1	chr8	+	1478	4	FSM	ENSMUSG00000046152.17	ENST00000524021.1	1909	4	159	272	159	-272	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGTACTAGACTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	31685168	31750165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_31685278_31691237_31691533_31725622_31726459_31749927
ENSMUSG00000046223.11_24161909_24166243_1	chr7	+	339	3	ISM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	0	9149	0	-9149	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCGGGCGTCCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	24161908	24166243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24161993_24164555_24164667_24166099
ENSMUSG00000046223.11_24166161_24172065_1	chr7	+	307	3	ISM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	4252	3327	4252	-3327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCATAGCAACCAGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	24166160	24172065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24166244_24171323_24171480_24171997
ENSMUSG00000046223.11_24171372_24173724_1	chr7	+	333	3	ISM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	9463	1668	9463	-1668	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCATCAACTGCCGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	24171371	24173724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24171480_24171997_24172133_24173634
ENSMUSG00000046223.11_24171998_24174679_1	chr7	+	298	3	ISM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	10089	713	10089	-713	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACCGTAAGAGGCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	24171997	24174679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24172133_24173634_24173782_24174663
ENSMUSG00000046223.11_24172047_24174731_1	chr7	+	301	3	ISM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	10138	661	10138	-661	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGACTCCTTCCCGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	24172046	24174731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24172133_24173634_24173782_24174663
ENSMUSG00000046223.11_24172091_24174789_1	chr7	+	315	3	ISM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	10182	603	10182	-603	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACAGCCCCACAGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	24172090	24174789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24172133_24173634_24173782_24174663
ENSMUSG00000046223.11_24173729_24174915_1	chr7	+	305	2	ISM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	11820	477	11820	-477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGACCCAGGGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	24173728	24174915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24173782_24174663
ENSMUSG00000046229.11_156153939_156154501_1	chr2	-	464	2	FSM	ENSMUSG00000046229.11	ENSMUST00000079125.8	803	2	166	173	166	-173	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGATGCTGGTGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	156154501	156153938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_156154323_156154421
ENSMUSG00000046229.11_156154013_156154667_1	chr2	-	556	2	FSM	ENSMUSG00000046229.11	ENSMUST00000079125.8	803	2	0	247	0	-247	multi-exon	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGCCTTCCGGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	156154667	156154012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_156154323_156154421
ENSMUSG00000046229.11_156154013_156154667_2	chr2	-	550	2	NNC	ENSMUSG00000046229.11	novel	803	2	NA	NA	0	-247	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGCCTTCCGGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	156154667	156154012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_156154323_156154427
ENSMUSG00000046242.9_99338257_99351723_1	chr9	+	551	6	ISM	ENSMUSG00000046242.9	ENST00000383180.6	891	8	4318	1262	-3485	-1262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCACCGAGGATGTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	99338256	99351723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_99338321_99341742_99341847_99342581_99342719_99350228_99350312_99350679_99350773_99351653
ENSMUSG00000046242.9_99341808_99350252_1	chr9	+	200	3	ISM	ENSMUSG00000046242.9	ENST00000317876.8	716	6	66	2733	66	-2733	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCATCATTAAGCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	99341807	99350252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_99341847_99342581_99342719_99350228
ENSMUSG00000046242.9_99342581_99352883_1	chr9	+	510	5	ISM	ENSMUSG00000046242.9	ENST00000317876.8	716	6	839	102	839	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGGAAGCCGGGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	99342580	99352883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_99342719_99350228_99350312_99350679_99350773_99351653_99351809_99352842
ENSMUSG00000046330.11_72750917_72752972_1	chr1	+	438	3	ISM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	468	0	47	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9883	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTACATAGCTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	72750916	72752972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_72750960_72751300_72751384_72752660
ENSMUSG00000046330.11_72750917_72752972_2	chr1	+	430	3	NNC	ENSMUSG00000046330.11	novel	558	4	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7003	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTACATAGCTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	72750916	72752972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_72750952_72751300_72751384_72752660
ENSMUSG00000046330.11_72750917_72752972_3	chr1	+	430	3	NNC	ENSMUSG00000046330.11	novel	238	3	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTACATAGCTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	72750916	72752972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_72750964_72751312_72751384_72752660
ENSMUSG00000046330.11_72750917_72752972_4	chr1	+	436	3	NNC	ENSMUSG00000046330.11	novel	238	3	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7614	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTACATAGCTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	72750916	72752972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_72750964_72751306_72751384_72752660
ENSMUSG00000046338.5_127269221_127273682_1	chr2	+	827	8	ISM	ENSMUSG00000046338.5	ENST00000453542.5	2244	21	2111	4230	2102	-4230	internal_fragment	TRUE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTTCCCAGTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	127269220	127273682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582
ENSMUSG00000046338.5_127269473_127274354_1	chr2	+	759	8	ISM	ENSMUSG00000046338.5	ENST00000453542.5	2244	21	2363	3558	2354	-3558	internal_fragment	TRUE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCTGCAACCGTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	127269472	127274354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127274291
ENSMUSG00000046338.5_127270165_127274652_1	chr2	+	849	8	ISM	ENSMUSG00000046338.5	ENST00000453542.5	2244	21	3055	3260	3046	-3260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGAGCACAGATGTATG	NA	NA	NA	NA	NA	NA	NA	NA	127270164	127274652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127274291_127274415_127274569
ENSMUSG00000046338.5_127270668_127274928_1	chr2	+	748	8	ISM	ENSMUSG00000046338.5	ENST00000453542.5	2244	21	3558	2984	3549	-2984	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCACCAACTGGCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	127270667	127274928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127274291_127274415_127274569_127274653_127274891
ENSMUSG00000046338.5_127270916_127275576_1	chr2	+	860	8	ISM	ENSMUSG00000046338.5	ENST00000453542.5	2244	21	3806	2336	3797	-2336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCACTGCATGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	127270915	127275576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127274291_127274415_127274569_127274653_127274891_127275011_127275505
ENSMUSG00000046338.5_127272792_127275774_1	chr2	+	818	8	ISM	ENSMUSG00000046338.5	ENST00000453542.5	2244	21	5682	2138	5673	-2138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGGCACATGTGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	127272791	127275774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127272875_127273202_127273337_127273582_127273683_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275669
ENSMUSG00000046338.5_127273614_127276049_1	chr2	+	758	7	ISM	ENSMUSG00000046338.5	ENST00000453542.5	2244	21	6504	1863	6495	-1863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCTGCAGGGCATAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	127273613	127276049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127273683_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275669_127275911_127275997
ENSMUSG00000046338.5_127274328_127276350_1	chr2	+	793	7	ISM	ENSMUSG00000046338.5	ENST00000453542.5	2244	21	7218	1562	7209	-1562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCATCCAGTGTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	127274327	127276350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275669_127275911_127275997_127276147_127276307
ENSMUSG00000046338.5_127274598_127276752_1	chr2	+	754	7	ISM	ENSMUSG00000046338.5	ENST00000453542.5	2244	21	7488	1160	7479	-1160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGCAAAGCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	127274597	127276752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127274653_127274891_127275011_127275505_127275577_127275669_127275911_127275997_127276147_127276307_127276386_127276711
ENSMUSG00000046338.5_127274968_127276963_1	chr2	+	751	7	ISM	ENSMUSG00000046338.5	ENST00000453542.5	2244	21	7858	949	7849	-949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGCCGCTTGCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	127274967	127276963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127275011_127275505_127275577_127275669_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926
ENSMUSG00000046338.5_127275768_127277784_1	chr2	+	765	8	ISM	ENSMUSG00000046338.5	ENST00000453542.5	2244	21	8658	128	8649	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTACAGGACCCCAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	127275767	127277784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ENSMUSG00000046338.5_127275830_127277851_1	chr2	+	770	8	ISM	ENSMUSG00000046338.5	ENST00000453542.5	2244	21	8720	61	8711	-61	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTATCCGACAGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	127275829	127277851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ENSMUSG00000046338.5_127275881_127277912_1	chr2	+	780	8	ISM	ENSMUSG00000046338.5	ENST00000453542.5	2244	21	8771	0	8762	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTCAAGTGTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	127275880	127277912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ENSMUSG00000046364.15_109118354_109121574_1	chr7	+	1153	5	NNC	ENSMUSG00000046364.15	novel	1158	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12024	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCTTTAAATCTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	109118353	109121574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_109118430_109118791_109118856_109119129_109119201_109119674_109119850_109120807
ENSMUSG00000046364.15_109118354_109121574_2	chr7	+	1150	5	NNC	ENSMUSG00000046364.15	novel	1158	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12044	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCTTTAAATCTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	109118353	109121574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_109118430_109118799_109118856_109119124_109119201_109119674_109119850_109120807
ENSMUSG00000046364.15_109118791_109121574_1	chr7	+	1082	4	NNC	ENSMUSG00000046364.15	novel	1158	5	NA	NA	437	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCTTTAAATCTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	109118790	109121574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_109118860_109119129_109119201_109119674_109119850_109120807
ENSMUSG00000046404.6_130645419_130649999_1	chr1	+	3677	2	FSM	ENSMUSG00000046404.6	ENSMUST00000049813.6	6128	2	355	2096	355	-2096	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACCCTAGTCACAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	130645418	130649999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_130645549_130646452
ENSMUSG00000046404.6_130645470_130650066_1	chr1	+	3693	2	FSM	ENSMUSG00000046404.6	ENSMUST00000049813.6	6128	2	406	2029	406	-2029	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATCTAGATGCTACCAC	NA	NA	NA	NA	NA	NA	NA	NA	130645469	130650066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_130645549_130646452
ENSMUSG00000046417.15_62496592_62539355_1	chr11	-	995	3	FSM	ENSMUSG00000046417.15	ENST00000409083.7	1007	3	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACACCTGCCAGGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	62539355	62496591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_62497073_62511259_62511389_62538970
ENSMUSG00000046432.13_135171054_135172338_1	chrX	+	497	3	FSM	ENSMUSG00000046432.13	ENSMUST00000053540.11	930	3	44	389	0	-331	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTCTACGCATCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	135171053	135172338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_135171151_135171558_135171632_135172011
ENSMUSG00000046434.17_103148881_103153384_1	chr15	+	1732	10	NNC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	103148880	103153384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_103148949_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ENSMUSG00000046434.17_103148881_103153384_2	chr15	+	1733	10	NNC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	103148880	103153384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150894_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ENSMUSG00000046434.17_103148881_103153384_3	chr15	+	1730	10	NNC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	103148880	103153384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152691
ENSMUSG00000046434.17_103148881_103153384_4	chr15	+	1732	10	NNC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	103148880	103153384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150813_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ENSMUSG00000046460.16_54441430_54451097_1	chr9	+	1686	7	NNC	ENSMUSG00000046460.16	novel	1699	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCTGCCTCAGAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	54441429	54451097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_54441606_54442892_54442983_54446247_54446414_54446661_54446861_54448097_54448582_54448725_54448785_54450585
ENSMUSG00000046460.16_54441430_54451097_2	chr9	+	1688	7	NNC	ENSMUSG00000046460.16	novel	1699	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1093	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCTGCCTCAGAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	54441429	54451097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_54441606_54442892_54442983_54446253_54446414_54446661_54446869_54448097_54448582_54448725_54448785_54450585
ENSMUSG00000046460.16_54441430_54451097_3	chr9	+	1694	7	FSM	ENSMUSG00000046460.16	ENST00000328828.6	1699	7	5	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCTGCCTCAGAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	54441429	54451097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_54441606_54442892_54442983_54446247_54446414_54446661_54446869_54448097_54448582_54448725_54448785_54450585
ENSMUSG00000046480.7_45050221_45061799_1	chr9	+	401	3	FSM	ENSMUSG00000046480.7	ENST00000529878.1	552	3	90	61	90	-61	multi-exon	FALSE	canonical	NA	NA	NA	NA	2365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCCTGCTCGGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	45050220	45061799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_45050401_45060563_45060694_45061708
ENSMUSG00000046480.7_45050221_45061799_2	chr9	+	397	3	NNC	ENSMUSG00000046480.7	novel	552	3	NA	NA	90	-61	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2026	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCCTGCTCGGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	45050220	45061799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_45050401_45060563_45060694_45061712
ENSMUSG00000046480.7_45050285_45061860_1	chr9	+	398	3	FSM	ENSMUSG00000046480.7	ENST00000529878.1	552	3	154	0	154	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCCTATCTGAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	45050284	45061860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_45050401_45060563_45060694_45061708
ENSMUSG00000046480.7_45050285_45061860_2	chr9	+	394	3	NNC	ENSMUSG00000046480.7	novel	552	3	NA	NA	154	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCCTATCTGAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	45050284	45061860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_45050401_45060563_45060694_45061712
ENSMUSG00000046516.11_38167353_38173125_1	chr16	+	434	3	NNC	ENSMUSG00000046516.11	novel	444	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTTGTGTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38167352	38173125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_38167570_38169612_38169692_38172987
ENSMUSG00000046550.9_152616298_152617093_1	chrX	+	493	2	FSM	ENSMUSG00000046550.9	ENST00000614076.1	537	2	44	0	44	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTGGAAACTACCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	152616297	152617093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_152616408_152616710
ENSMUSG00000046567.11_100408736_100411749_1	chr10	-	424	3	ISM	ENSMUSG00000046567.11	ENST00000356891.4	1041	8	13230	-2	8119	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACATACAGGATACATGT	NA	NA	NA	NA	NA	NA	NA	NA	100411749	100408735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_100408769_100409402_100409623_100411578
ENSMUSG00000046567.11_100409403_100419871_1	chr10	-	801	5	ISM	ENSMUSG00000046567.11	ENST00000356891.4	1041	8	5108	665	-3	-665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTTTCTAAGACTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	100419871	100409402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_100409623_100411578_100411749_100413022_100413221_100414176_100414294_100419775
ENSMUSG00000046567.11_100409533_100422170_1	chr10	-	789	6	ISM	ENSMUSG00000046567.11	ENST00000356891.4	1041	8	2809	795	-2302	-795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTATGACTGTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	100422170	100409532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_100409623_100411578_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052
ENSMUSG00000046567.11_100411577_100425027_1	chr10	-	840	6	ISM	ENSMUSG00000046567.11	ENST00000356891.4	1041	8	-48	2839	-48	1451	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGACAAGAAACAACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	100425027	100411576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
ENSMUSG00000046567.11_100413028_100419871_1	chr10	-	406	3	ISM	ENSMUSG00000046567.11	ENST00000356891.4	1041	8	5108	4290	-3	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGGTAAGTGAAGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	100419871	100413027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_100413221_100414176_100414294_100419775
ENSMUSG00000046567.11_100413042_100425135_1	chr10	-	757	5	ISM	ENSMUSG00000046567.11	ENST00000356891.4	1041	8	-156	4304	122	-14	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATGGAAACCCCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	100425135	100413041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
ENSMUSG00000046567.11_100413195_100424927_1	chr10	-	396	5	ISM	ENSMUSG00000046567.11	ENST00000356891.4	1041	8	52	4457	52	-167	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATATTGCTGGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	100424927	100413194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
ENSMUSG00000046573.8_36162378_36276911_1	chr13	-	1636	2	ISM	ENSMUSG00000046573.8	ENSMUST00000053265.8	2086	3	24598	0	24598	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACCCAGCTAAACTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	36276911	36162377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_36163891_36276788
ENSMUSG00000046573.8_36162564_36301340_1	chr13	-	1731	3	FSM	ENSMUSG00000046573.8	ENSMUST00000053265.8	2086	3	169	186	169	-186	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCATGCATGTAAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	36301340	36162563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_36163891_36276788_36276910_36301057
ENSMUSG00000046573.8_36162652_36301374_1	chr13	-	1677	3	FSM	ENSMUSG00000046573.8	ENSMUST00000053265.8	2086	3	135	274	135	-274	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTAACTTCTGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	36301374	36162651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_36163891_36276788_36276910_36301057
ENSMUSG00000046603.17_122634668_122664270_1	chr9	+	1856	11	FSM	ENSMUSG00000046603.17	ENSMUST00000052740.14	3049	11	64	1129	64	-1129	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTATTTTAAAGATATGC	NA	NA	NA	NA	NA	NA	NA	NA	122634667	122664270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_122634754_122637831_122637902_122640822_122640959_122643496_122643654_122647838_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
ENSMUSG00000046603.17_122643568_122664616_1	chr9	+	1839	8	ISM	ENSMUSG00000046603.17	ENSMUST00000052740.14	3049	11	8964	783	8964	-783	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAAGTTTACTAAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	122643567	122664616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_122643654_122647838_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
ENSMUSG00000046603.17_122647964_122664809_1	chr9	+	1821	7	ISM	ENSMUSG00000046603.17	ENSMUST00000052740.14	3049	11	13360	590	13360	-590	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTATGGCTCGCTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	122647963	122664809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
ENSMUSG00000046603.17_122655930_122665188_1	chr9	+	1833	4	ISM	ENSMUSG00000046603.17	ENSMUST00000052740.14	3049	11	21326	211	21326	-211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGTGAGTTTCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	122655929	122665188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_122656004_122660684_122660924_122662590_122662723_122663800
ENSMUSG00000046603.17_122660738_122665392_1	chr9	+	1910	3	ISM	ENSMUSG00000046603.17	ENSMUST00000052740.14	3049	11	26134	7	26134	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACAGCTGCGTTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	122660737	122665392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_122660924_122662590_122662723_122663800
ENSMUSG00000046603.17_122660804_122665392_1	chr9	+	1844	3	ISM	ENSMUSG00000046603.17	ENSMUST00000052740.14	3049	11	26200	7	26200	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACAGCTGCGTTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	122660803	122665392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_122660924_122662590_122662723_122663800
ENSMUSG00000046636.6_27731697_27733536_1	chr18	+	1686	2	NNC	ENSMUSG00000046636.6	novel	801	2	NA	NA	0	727	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTGCTTGTCATATGGA	NA	NA	NA	NA	NA	NA	NA	NA	27731696	27733536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_27732451_27732604
ENSMUSG00000046637.4_154923397_154945052_1	chr4	+	1966	5	ISM	ENSMUSG00000046637.4	ENST00000401095.8	3240	8	132	5184	132	-5184	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTTACGGGCTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	154923396	154945052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_154924068_154940095_154940925_154942417_154942644_154943766_154943972_154945017
ENSMUSG00000046637.4_154923452_154945110_1	chr4	+	1969	5	ISM	ENSMUSG00000046637.4	ENST00000401095.8	3240	8	187	5126	187	-5126	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGGGAGGAACCAGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	154923451	154945110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_154924068_154940095_154940925_154942417_154942644_154943766_154943972_154945017
ENSMUSG00000046637.4_154923502_154945172_1	chr4	+	1981	5	ISM	ENSMUSG00000046637.4	ENST00000401095.8	3240	8	237	5064	237	-5064	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGCTGCAGGTGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	154923501	154945172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_154924068_154940095_154940925_154942417_154942644_154943766_154943972_154945017
ENSMUSG00000046637.4_154923632_154945741_1	chr4	+	1986	6	ISM	ENSMUSG00000046637.4	ENST00000401095.8	3240	8	367	4495	367	-4495	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCCTGAACCAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	154923631	154945741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_154924068_154940095_154940925_154942417_154942644_154943766_154943972_154945017_154945185_154945618
ENSMUSG00000046637.4_154923708_154945778_1	chr4	+	1947	6	ISM	ENSMUSG00000046637.4	ENST00000401095.8	3240	8	443	4458	443	-4458	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGGAAGAGGACACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	154923707	154945778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_154924068_154940095_154940925_154942417_154942644_154943766_154943972_154945017_154945185_154945618
ENSMUSG00000046637.4_154923883_154946620_1	chr4	+	1953	7	ISM	ENSMUSG00000046637.4	ENST00000401095.8	3240	8	618	3616	618	-3616	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGGCAAGGCTTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	154923882	154946620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_154924068_154940095_154940925_154942417_154942644_154943766_154943972_154945017_154945185_154945618_154945890_154946550
ENSMUSG00000046637.4_154923992_154946730_1	chr4	+	1954	7	ISM	ENSMUSG00000046637.4	ENST00000401095.8	3240	8	727	3506	727	-3506	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACTCCCCAGAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	154923991	154946730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_154924068_154940095_154940925_154942417_154942644_154943766_154943972_154945017_154945185_154945618_154945890_154946550
ENSMUSG00000046637.4_154940657_154950236_1	chr4	+	1876	7	ISM	ENSMUSG00000046637.4	ENST00000401095.8	3240	8	17392	0	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCTGCTTGACTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	154940656	154950236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_154940925_154942417_154942644_154943766_154943972_154945017_154945185_154945618_154945890_154946550_154946766_154949712
ENSMUSG00000046668.10_35962946_35993883_1	chr18	+	1592	3	FSM	ENSMUSG00000046668.10	ENST00000302517.8	2560	3	113	855	105	-855	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGTTTTTATATATAT	NA	NA	NA	NA	NA	NA	NA	NA	35962945	35993883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_35963293_35991445_35992510_35993702
ENSMUSG00000046668.10_35991874_35994741_1	chr18	+	1675	2	ISM	ENSMUSG00000046668.10	ENSMUST00000060722.8	2302	3	29033	0	29033	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACTCCTGGCTTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	35991873	35994741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35992510_35993702
ENSMUSG00000046671.19_134253342_134256533_1	chr4	-	616	2	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	6046	481	3505	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCTAAGGGGGAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	134256533	134253341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134253824_134256399
ENSMUSG00000046671.19_134253442_134256614_1	chr4	-	597	2	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	5965	581	3424	-567	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAATGAACGACTTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	134256614	134253441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134253824_134256399
ENSMUSG00000046671.19_134253592_134257649_1	chr4	-	618	3	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	4930	731	2389	-717	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTCGCTGTTTCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	134257649	134253591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134253824_134256399_134256722_134257585
ENSMUSG00000046671.19_134253650_134257694_1	chr4	-	605	3	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	4885	789	2344	-775	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCGAGATCTGCAACCGT	NA	NA	NA	NA	NA	NA	NA	NA	134257694	134253649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134253824_134256399_134256722_134257585
ENSMUSG00000046671.19_134253696_134257609_1	chr4	-	365	3	ISM	ENSMUSG00000046671.19	ENST00000474295.5	1782	7	5014	821	2429	-821	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTCCTGAACTTCAATA	NA	NA	NA	NA	NA	NA	NA	NA	134257609	134253695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134253824_134256399_134256613_134257585
ENSMUSG00000046671.19_134253700_134257767_1	chr4	-	628	3	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	4812	839	2271	-825	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGCTCCTGAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	134257767	134253699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134253824_134256399_134256722_134257585
ENSMUSG00000046671.19_134253750_134257667_1	chr4	-	369	3	ISM	ENSMUSG00000046671.19	ENST00000474295.5	1782	7	4956	875	2371	-875	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAGAAGACATCAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	134257667	134253749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134253824_134256399_134256613_134257585
ENSMUSG00000046671.19_134253793_134257728_1	chr4	-	387	3	ISM	ENSMUSG00000046671.19	ENST00000474295.5	1782	7	4895	918	2310	-918	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCTCATCTCTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	134257728	134253792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134253824_134256399_134256613_134257585
ENSMUSG00000046671.19_134253796_134258049_1	chr4	-	621	4	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	4530	935	1989	-921	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCCTCATCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	134258049	134253795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990
ENSMUSG00000046671.19_134256488_134258100_1	chr4	-	447	3	ISM	ENSMUSG00000046671.19	ENST00000474295.5	1782	7	4523	3613	1938	-89	internal_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCATCTCTCTGTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	134258100	134256487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134256613_134257585_134257798_134257990
ENSMUSG00000046671.19_134256488_134259560_1	chr4	-	484	4	ISM	ENSMUSG00000046671.19	ENST00000526894.5	673	5	478	89	478	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCATCTCTCTGTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	134259560	134256487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134256544_134257585_134257798_134257990_134258101_134259454
ENSMUSG00000046671.19_134256560_134259971_1	chr4	-	623	5	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	2608	3699	67	-161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTTCTGCCAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	134259971	134256559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937
ENSMUSG00000046671.19_134256560_134260025_1	chr4	-	677	5	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	2554	3699	13	-161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTTCTGCCAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	134260025	134256559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937
ENSMUSG00000046671.19_134256705_134260063_1	chr4	-	570	5	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	2516	3844	-25	-306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGATTTCTTCTCTTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	134260063	134256704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937
ENSMUSG00000046671.19_134257649_134262698_1	chr4	-	628	5	ISM	ENSMUSG00000046671.19	ENSMUST00000116279.10	1969	7	0	4781	0	-1250	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCAGGATGAGCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	134262698	134257648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262560
ENSMUSG00000046671.19_134257667_134260010_1	chr4	-	419	4	ISM	ENSMUSG00000046671.19	ENST00000526894.5	673	5	28	1268	28	-1268	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGCCGCACCACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	134260010	134257666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134257798_134257990_134258101_134259454_134259560_134259937
ENSMUSG00000046671.19_134260003_134262481_1	chr4	-	150	2	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	98	7142	98	-3604	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGGGTGCCTCGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	134262481	134260002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_134260064_134262392
ENSMUSG00000046679.17_86422558_86447370_1	chr6	+	1999	8	ISM	ENSMUSG00000046679.17	ENSMUST00000113698.8	2922	10	6849	0	6849	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCATTGATGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	86422557	86447370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_86423251_86424322_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ENSMUSG00000046694.7_133207561_133214814_1	chr4	+	1734	2	FSM	ENSMUSG00000046694.7	ENSMUST00000051676.7	2287	2	118	435	118	-435	multi-exon	TRUE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGGGTACGGTTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	133207560	133214814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_133207875_133213394
ENSMUSG00000046694.7_133207640_133214884_1	chr4	+	1725	2	FSM	ENSMUSG00000046694.7	ENSMUST00000051676.7	2287	2	197	365	197	-365	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGCATAAAGCAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	133207639	133214884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_133207875_133213394
ENSMUSG00000046694.7_133207689_133214938_1	chr4	+	1730	2	FSM	ENSMUSG00000046694.7	ENSMUST00000051676.7	2287	2	246	311	246	-311	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTCCTTGCCCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	133207688	133214938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_133207875_133213394
ENSMUSG00000046711.17_27775669_27781820_1	chr17	+	1054	5	FSM	ENSMUSG00000046711.17	ENSMUST00000118570.2	1898	5	27	817	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCCCCAGCCCCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	27775668	27781820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_27776041_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ENSMUSG00000046711.17_27778560_27782183_1	chr17	+	992	4	ISM	ENSMUSG00000046711.17	ENSMUST00000232552.2	917	5	2945	-237	2891	175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCTAGCCTTGCCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	27778559	27782183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27778645_27779901_27779986_27780434_27780486_27781411
ENSMUSG00000046711.17_27779901_27782637_1	chr17	+	1362	3	ISM	ENSMUSG00000046711.17	ENSMUST00000118570.2	1898	5	4259	0	4232	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGACAGTCTCTGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	27779900	27782637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27779986_27780434_27780486_27781411
ENSMUSG00000046727.14_36481816_36535880_1	chr18	+	612	3	FSM	ENSMUSG00000046727.14	ENSMUST00000050584.10	831	3	66	153	-11	-153	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATAATTTACTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	36481815	36535880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_36481870_36499567_36499795_36535549
ENSMUSG00000046727.14_36499630_36536033_1	chr18	+	649	2	ISM	ENSMUSG00000046727.14	ENSMUST00000050584.10	831	3	17880	0	17803	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGACTTACTCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	36499629	36536033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36499795_36535549
ENSMUSG00000046733.8_135056100_135060493_1	chr6	+	436	2	ISM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	13451	1214	13451	-1214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAAGTGACCTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	135056099	135060493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_135056483_135060440
ENSMUSG00000046733.8_135056244_135060921_1	chr6	+	472	3	ISM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	13595	786	13595	-786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACGGTACAGAGAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	135056243	135060921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_135056483_135060440_135060497_135060744
ENSMUSG00000046733.8_135056347_135060990_1	chr6	+	438	3	ISM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	13698	717	13698	-717	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTCTTCAAAGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	135056346	135060990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_135056483_135060440_135060497_135060744
ENSMUSG00000046733.8_135060439_135061143_1	chr6	+	457	2	ISM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	17790	564	17790	-564	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAAGCCAATTCACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	135060438	135061143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_135060497_135060744
ENSMUSG00000046750.19_27984077_27987621_1	chr7	-	293	3	FSM	ENSMUSG00000046750.19	ENST00000622070.2	364	3	0	71	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTCAGCGTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	27987621	27984076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_27984189_27987361_27987468_27987546
ENSMUSG00000046753.11_27203047_27206267_1	chr14	-	1884	3	ISM	ENSMUSG00000046753.11	ENSMUST00000223689.2	4262	18	24150	0	24135	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATGACTGCAATTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	27206267	27203046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_27204560_27205764_27205890_27206021
ENSMUSG00000046753.11_27203467_27208844_1	chr14	-	1938	5	ISM	ENSMUSG00000046753.11	ENSMUST00000223689.2	4262	18	21573	420	21558	-420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAAGGAAAAAAAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	27208844	27203466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419
ENSMUSG00000046753.11_27203864_27213793_1	chr14	-	1909	8	ISM	ENSMUSG00000046753.11	ENSMUST00000050480.8	2457	16	16609	-505	16609	505	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACTTGGTATTCTATAC	NA	NA	NA	NA	NA	NA	NA	NA	27213793	27203863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744
ENSMUSG00000046753.11_27204012_27215050_1	chr14	-	1949	9	ISM	ENSMUSG00000046753.11	ENSMUST00000050480.8	2457	16	15352	-357	15352	357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGTATTGAAAGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	27215050	27204011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975
ENSMUSG00000046753.11_27204364_27216118_1	chr14	-	1939	11	ISM	ENSMUSG00000046753.11	ENSMUST00000050480.8	2457	16	14284	-5	14284	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCTCTTGTCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	27216118	27204363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037
ENSMUSG00000046753.11_27205834_27220474_1	chr14	-	1915	12	ISM	ENSMUSG00000046753.11	ENSMUST00000050480.8	2457	16	9928	1465	9928	-1465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCCTAAATTAGTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	27220474	27205833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397
ENSMUSG00000046753.11_27208546_27222488_1	chr14	-	1922	11	ISM	ENSMUSG00000046753.11	ENSMUST00000223689.2	4262	18	7929	5499	7914	-4177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGCTGCTTCACTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	27222488	27208545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197
ENSMUSG00000046756.11_115494751_115498322_1	chr11	+	1422	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	0	540	0	463	multi-exon	TRUE	canonical	NA	NA	NA	NA	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCTCCCCCCCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	115494750	115498322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
ENSMUSG00000046756.11_115494898_115498405_1	chr11	+	1358	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	147	457	147	-457	multi-exon	FALSE	canonical	NA	NA	NA	NA	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAAAGACCTCTGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	115494897	115498405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
ENSMUSG00000046756.11_115494994_115498477_1	chr11	+	1334	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	243	385	243	-385	multi-exon	FALSE	canonical	NA	NA	NA	NA	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGCAGAGCACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	115494993	115498477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
ENSMUSG00000046756.11_115495546_115497859_1	chr11	+	621	4	FSM	ENSMUSG00000046756.11	ENST00000544148.1	621	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAGCAGGAGAGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	115495545	115497859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115495739_115495848_115495913_115496815_115496964_115497643
ENSMUSG00000046756.11_115495693_115498620_1	chr11	+	1255	4	ISM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	942	242	147	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTAATGGGCTCTGACGC	NA	NA	NA	NA	NA	NA	NA	NA	115495692	115498620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115495739_115495848_115495913_115496795_115496964_115497643
ENSMUSG00000046756.11_115495693_115498669_1	chr11	+	1304	4	ISM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	942	193	147	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTGGACTCATAAGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	115495692	115498669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115495739_115495848_115495913_115496795_115496964_115497643
ENSMUSG00000046756.11_115495861_115498862_1	chr11	+	1439	3	ISM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	1110	0	315	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTAACTTGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	115495860	115498862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115495913_115496795_115496964_115497643
ENSMUSG00000046768.14_75355096_75422175_1	chr12	+	734	2	ISM	ENSMUSG00000046768.14	ENSMUST00000118602.8	2396	5	0	20416	0	-20416	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGTACGAGCTCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	75355095	75422175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_75355776_75422121
ENSMUSG00000046768.14_75355242_75444730_1	chr12	+	4746	4	FSM	ENSMUSG00000046768.14	ENSMUST00000118966.8	4892	4	146	0	146	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTCATTCGATACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	75355241	75444730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_75355776_75422121_75422181_75438452_75438618_75440742
ENSMUSG00000046768.14_75355447_75446986_1	chr12	+	755	5	FSM	ENSMUSG00000046768.14	ENSMUST00000055390.6	2350	5	351	1244	351	-1244	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGCTTAGGGTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	75355446	75446986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_75355776_75422121_75422181_75438452_75438618_75440742_75440839_75446880
ENSMUSG00000046768.14_75422122_75447232_1	chr12	+	672	4	ISM	ENSMUSG00000046768.14	ENSMUST00000055390.6	2350	5	67026	998	67026	-998	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGAATGCAGAGTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	75422121	75447232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_75422181_75438452_75438618_75440742_75440839_75446880
ENSMUSG00000046768.14_75438503_75447338_1	chr12	+	669	3	ISM	ENSMUSG00000046768.14	ENSMUST00000055390.6	2350	5	83407	892	83407	-892	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAGTCATGACGGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	75438502	75447338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_75438618_75440742_75440839_75446880
ENSMUSG00000046768.14_75438542_75447413_1	chr12	+	705	3	ISM	ENSMUSG00000046768.14	ENSMUST00000055390.6	2350	5	83446	817	83446	-817	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAACACCAACATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75438541	75447413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_75438618_75440742_75440839_75446880
ENSMUSG00000046793.9_108055973_108057826_1	chr3	-	1275	2	ISM	ENSMUSG00000046793.9	ENST00000618721.4	2776	3	4392	-15	4372	15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGACTCCTTCGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	108057826	108055972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108056489_108057067
ENSMUSG00000046793.9_108058013_108062198_1	chr3	-	1310	2	FSM	ENSMUSG00000046793.9	ENSMUST00000062028.8	3686	2	0	2376	0	-2025	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGCTGCCCTTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	108062198	108058012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_108059260_108062135
ENSMUSG00000046806.14_34851124_34853598_1	chr6	-	708	3	ISM	ENSMUSG00000046806.14	ENSMUST00000115007.9	3326	4	1397	2349	1346	-494	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCCAGATGCAAAGGAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	34853598	34851123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_34851631_34852471_34852548_34853473
ENSMUSG00000046806.14_34851332_34854944_1	chr6	-	718	4	FSM	ENSMUSG00000046806.14	ENSMUST00000115007.9	3326	4	51	2557	0	-702	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGGCCCCTGCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	34854944	34851331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_34851631_34852471_34852548_34853473_34853707_34854834
ENSMUSG00000046808.18_72387709_72412418_1	chr5	+	1136	8	NNC	ENSMUSG00000046808.18	novel	1305	8	NA	NA	92	-76	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTGTAGGAAATGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	72387708	72412418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404440_72404649_72412254
ENSMUSG00000046808.18_72387709_72412418_2	chr5	+	1137	8	FSM	ENSMUSG00000046808.18	ENST00000504445.1	1305	8	92	76	92	-76	multi-exon	FALSE	canonical	NA	NA	NA	NA	1747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTGTAGGAAATGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	72387708	72412418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404440_72404649_72412253
ENSMUSG00000046808.18_72387709_72412418_3	chr5	+	1128	8	NNC	ENSMUSG00000046808.18	novel	1305	8	NA	NA	92	-76	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTGTAGGAAATGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	72387708	72412418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_72387815_72396440_72396646_72399387_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404440_72404649_72412253
ENSMUSG00000046808.18_72387709_72412418_4	chr5	+	1128	8	NNC	ENSMUSG00000046808.18	novel	1305	8	NA	NA	92	-76	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTGTAGGAAATGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	72387708	72412418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404449_72404649_72412253
ENSMUSG00000046808.18_72387709_72412418_5	chr5	+	1128	8	NNC	ENSMUSG00000046808.18	novel	1305	8	NA	NA	92	-76	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTGTAGGAAATGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	72387708	72412418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403558_72404159_72404288_72404440_72404649_72412253
ENSMUSG00000046808.18_72387709_72412494_1	chr5	+	1208	8	NNC	ENSMUSG00000046808.18	novel	1305	8	NA	NA	92	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGACGTCATCGCCACACC	NA	NA	NA	NA	NA	NA	NA	NA	72387708	72412494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_72387815_72396445_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404440_72404649_72412253
ENSMUSG00000046808.18_72396438_72412494_1	chr5	+	1105	7	NNC	ENSMUSG00000046808.18	novel	1305	8	NA	NA	8821	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGACGTCATCGCCACACC	NA	NA	NA	NA	NA	NA	NA	NA	72396437	72412494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404440_72404649_72412258
ENSMUSG00000046814.4_118998254_119002871_1	chr2	+	640	3	NNC	ENSMUSG00000046814.4	novel	645	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1869	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTGTGCAGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	118998253	119002871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_118998350_119000156_119000252_119002422
ENSMUSG00000046836.14_183058807_183061112_1	chr1	-	1275	2	ISM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	17424	891	17424	-889	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCCAGACAGTGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	183061112	183058806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_183060003_183061033
ENSMUSG00000046836.14_183058863_183061172_1	chr1	-	1279	2	ISM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	17364	947	17364	-945	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGTGACAGATTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	183061172	183058862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_183060003_183061033
ENSMUSG00000046836.14_183059059_183062860_1	chr1	-	1337	4	ISM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	15676	1143	15676	-1141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTTCAGTATCCTATA	NA	NA	NA	NA	NA	NA	NA	NA	183062860	183059058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778
ENSMUSG00000046836.14_183059463_183067746_1	chr1	-	1272	8	ISM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	10790	1547	10790	-1545	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCTTTCCCTGTACTA	NA	NA	NA	NA	NA	NA	NA	NA	183067746	183059462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689
ENSMUSG00000046836.14_183059846_183075962_1	chr1	-	1270	12	ISM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	2574	1930	2574	-1928	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTCTGAAGCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	183075962	183059845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897
ENSMUSG00000046841.6_84364381_84369566_1	chr10	-	517	2	FSM	ENSMUSG00000046841.6	ENSMUST00000053871.5	3089	2	360	2212	334	-1881	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACAACATCGCCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	84369566	84364380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_84364642_84369310
ENSMUSG00000046861.10_116855734_116858075_1	chr4	+	871	7	ISM	ENSMUSG00000046861.10	ENST00000372168.7	1866	13	10	2789	10	-2789	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGGACTTCCCAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	116855733	116858075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018
ENSMUSG00000046861.10_116855868_116859337_1	chr4	+	795	8	ISM	ENSMUSG00000046861.10	ENST00000372168.7	1866	13	144	1527	144	-1527	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGGACAAGGAGACGTTT	NA	NA	NA	NA	NA	NA	NA	NA	116855867	116859337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312
ENSMUSG00000046861.10_116855919_116859394_1	chr4	+	801	8	ISM	ENSMUSG00000046861.10	ENST00000372168.7	1866	13	195	1470	195	-1470	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAGTGACCAACAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	116855918	116859394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312
ENSMUSG00000046861.10_116855974_116859445_1	chr4	+	797	8	ISM	ENSMUSG00000046861.10	ENST00000372168.7	1866	13	250	1419	250	-1419	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGGAATATGAGGATCGC	NA	NA	NA	NA	NA	NA	NA	NA	116855973	116859445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312
ENSMUSG00000046861.10_116856857_116859836_1	chr4	+	870	8	ISM	ENSMUSG00000046861.10	ENST00000372168.7	1866	13	1133	1028	1133	-1028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTCTAGGCGATAGGG	NA	NA	NA	NA	NA	NA	NA	NA	116856856	116859836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706
ENSMUSG00000046861.10_116857081_116860008_1	chr4	+	849	8	ISM	ENSMUSG00000046861.10	ENST00000372168.7	1866	13	1357	856	1357	-856	internal_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTAGAGGGCAGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	116857080	116860008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933
ENSMUSG00000046861.10_116857281_116860212_1	chr4	+	878	8	ISM	ENSMUSG00000046861.10	ENST00000372168.7	1866	13	1557	652	1557	-652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATGAGTACAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	116857280	116860212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130
ENSMUSG00000046861.10_116857442_116860387_1	chr4	+	882	8	ISM	ENSMUSG00000046861.10	ENST00000372168.7	1866	13	1718	477	1718	-477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTCCCGAGGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	116857441	116860387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315
ENSMUSG00000046861.10_116857849_116860537_1	chr4	+	780	8	ISM	ENSMUSG00000046861.10	ENST00000372168.7	1866	13	2125	327	2125	-327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACATGAGTCCCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	116857848	116860537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ENSMUSG00000046861.10_116857874_116860646_1	chr4	+	864	8	ISM	ENSMUSG00000046861.10	ENST00000372168.7	1866	13	2150	218	2150	-218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAGTGGGCCCTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	116857873	116860646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ENSMUSG00000046861.10_116859705_116860865_1	chr4	+	748	5	ISM	ENSMUSG00000046861.10	ENST00000372168.7	1866	13	3981	-1	3981	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTTTCCCCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	116859704	116860865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ENSMUSG00000046865.8_27869192_27878694_2	chr7	+	1134	9	NNC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	27869191	27878694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_27869244_27873928_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878463_27878555
ENSMUSG00000046865.8_27869192_27878694_3	chr7	+	1133	9	NNC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	27869191	27878694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_27869244_27873935_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
ENSMUSG00000046865.8_27869192_27878694_4	chr7	+	1131	9	NNC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	27869191	27878694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_27869244_27873928_27874103_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
ENSMUSG00000046909.10_80027704_80028899_1	chr11	-	558	2	ISM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	4102	200	4102	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTTAGTTTTTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	80028899	80027703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_80028106_80028743
ENSMUSG00000046909.10_80027894_80030938_1	chr11	-	609	3	ISM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	2063	390	2063	-390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGATGATCGGCGACACGA	NA	NA	NA	NA	NA	NA	NA	NA	80030938	80027893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_80028106_80028743_80028894_80030691
ENSMUSG00000046909.10_80028772_80032969_1	chr11	-	647	3	ISM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	32	1268	32	-1268	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCAACGTCCTTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	80032969	80028771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_80028894_80030691_80031150_80032902
ENSMUSG00000046947.13_39560758_39564473_1	chr6	+	593	4	ISM	ENSMUSG00000046947.13	ENSMUST00000051249.13	2287	7	9860	213	9860	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGGGTCTGCCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	39560757	39564473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_39560997_39562660_39562790_39563774_39563829_39564302
ENSMUSG00000046961.9_37767982_37825786_1	chr16	+	2106	9	ISM	ENSMUSG00000046961.9	ENST00000464295.6	3643	10	101	1605	-92	-428	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCAAGAGGCCGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	37767981	37825786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37768182_37768576_37768714_37799020_37799151_37799367_37799479_37807828_37807955_37808879_37808976_37812361_37812599_37818238_37818398_37824876
ENSMUSG00000046961.9_37768032_37825844_1	chr16	+	2114	9	ISM	ENSMUSG00000046961.9	ENST00000464295.6	3643	10	151	1547	-42	-370	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAGGCACAAAGTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	37768031	37825844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37768182_37768576_37768714_37799020_37799151_37799367_37799479_37807828_37807955_37808879_37808976_37812361_37812599_37818238_37818398_37824876
ENSMUSG00000046961.9_37768102_37825903_1	chr16	+	2103	9	ISM	ENSMUSG00000046961.9	ENST00000464295.6	3643	10	221	1488	28	-311	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTCAGCCTCGACCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	37768101	37825903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37768182_37768576_37768714_37799020_37799151_37799367_37799479_37807828_37807955_37808879_37808976_37812361_37812599_37818238_37818398_37824876
ENSMUSG00000046961.9_37768127_37812417_1	chr16	+	699	7	ISM	ENSMUSG00000046961.9	ENST00000461057.1	2430	9	53	13797	53	-13797	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCAGTGAACCAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	37768126	37812417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37768182_37768576_37768714_37799020_37799151_37799367_37799479_37807828_37807943_37808879_37808976_37812361
ENSMUSG00000046961.9_37768616_37826019_1	chr16	+	2100	8	ISM	ENSMUSG00000046961.9	ENST00000464295.6	3643	10	735	1372	542	-195	internal_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGAAATCTGCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	37768615	37826019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37768714_37799020_37799151_37799367_37799479_37807828_37807955_37808879_37808976_37812361_37812599_37818238_37818398_37824876
ENSMUSG00000046961.9_37768671_37826082_1	chr16	+	2108	8	ISM	ENSMUSG00000046961.9	ENST00000464295.6	3643	10	790	1309	597	-132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGCAGGCTTCAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	37768670	37826082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37768714_37799020_37799151_37799367_37799479_37807828_37807955_37808879_37808976_37812361_37812599_37818238_37818398_37824876
ENSMUSG00000046961.9_37799079_37818316_1	chr16	+	708	6	ISM	ENSMUSG00000046961.9	ENST00000461057.1	2430	9	31005	7898	31005	-7898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCCACGGCCAGTTCGA	NA	NA	NA	NA	NA	NA	NA	NA	37799078	37818316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37799151_37799367_37799479_37807828_37807943_37808879_37808976_37812361_37812599_37818238
ENSMUSG00000046961.9_37799121_37826218_1	chr16	+	2101	7	ISM	ENSMUSG00000046961.9	ENST00000464295.6	3643	10	31240	1173	31047	4	internal_fragment	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTGGCCAGCCTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	37799120	37826218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37799151_37799367_37799479_37807828_37807955_37808879_37808976_37812361_37812599_37818238_37818398_37824876
ENSMUSG00000046961.9_37799420_37824919_1	chr16	+	708	6	ISM	ENSMUSG00000046961.9	ENST00000461057.1	2430	9	31346	1295	31346	-1295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGGAAAAGCTGGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	37799419	37824919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37799479_37807828_37807943_37808879_37808976_37812361_37812599_37818238_37818398_37824876
ENSMUSG00000046961.9_37799442_37826341_1	chr16	+	2120	6	ISM	ENSMUSG00000046961.9	ENST00000464295.6	3643	10	31561	1050	31368	127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTCAACTGAAGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	37799441	37826341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37799479_37807828_37807955_37808879_37808976_37812361_37812599_37818238_37818398_37824876
ENSMUSG00000046961.9_37807917_37826442_1	chr16	+	2096	5	ISM	ENSMUSG00000046961.9	ENST00000464295.6	3643	10	40036	949	39843	228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGACCAAAAGATGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	37807916	37826442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37807955_37808879_37808976_37812361_37812599_37818238_37818398_37824876
ENSMUSG00000046961.9_37824967_37827266_1	chr16	+	2131	2	ISM	ENSMUSG00000046961.9	ENST00000464295.6	3643	10	57086	125	56893	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTTCCCTAATTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	37824966	37827266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37826946_37827114
ENSMUSG00000046961.9_37825034_37827344_1	chr16	+	2142	2	ISM	ENSMUSG00000046961.9	ENST00000464295.6	3643	10	57153	47	56960	-47	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCCAGGGATACATCTC	NA	NA	NA	NA	NA	NA	NA	NA	37825033	37827344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37826946_37827114
ENSMUSG00000046961.9_37825107_37827372_1	chr16	+	2097	2	ISM	ENSMUSG00000046961.9	ENST00000464295.6	3643	10	57226	19	57033	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGGAAGTGGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	37825106	37827372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_37826946_37827114
ENSMUSG00000047003.16_75490634_75496023_1	chr15	+	1531	2	ISM	ENSMUSG00000047003.16	ENSMUST00000161785.8	3540	3	2106	1126	2101	-1126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATTCCTTCAGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	75490633	75496023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_75491541_75495399
ENSMUSG00000047021.15_74964075_74964595_1	chr1	-	301	2	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	7678	132	7678	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGACCCCAGTCACTAG	NA	NA	NA	NA	NA	NA	NA	NA	74964595	74964074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74964312_74964531
ENSMUSG00000047021.15_74964134_74964637_1	chr1	-	284	2	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	7636	191	7636	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACTATACCAAAGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	74964637	74964133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74964312_74964531
ENSMUSG00000047021.15_74964266_74965659_1	chr1	-	317	3	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	6614	323	6614	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGGAGTACTTTTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	74965659	74964265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74964312_74964531_74964733_74965589
ENSMUSG00000047021.15_74964589_74965717_1	chr1	-	272	2	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	6556	646	6556	-646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAGGAGAAAAAGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	74965717	74964588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74964733_74965589
ENSMUSG00000047021.15_74964636_74965773_1	chr1	-	281	2	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	6500	693	6500	-693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCGGGGCCTGACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	74965773	74964635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74964733_74965589
ENSMUSG00000047021.15_74965650_74966279_1	chr1	-	313	2	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	5994	1707	5994	-1707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGCCCACTCACCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	74966279	74965649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74965856_74966172
ENSMUSG00000047021.15_74965764_74966332_1	chr1	-	252	2	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	5941	1821	5941	-1821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTGCCAGGCTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	74966332	74965763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74965856_74966172
ENSMUSG00000047021.15_74965801_74966396_1	chr1	-	279	2	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	5877	1858	5877	-1858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACGCCGGGAACAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	74966396	74965800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74965856_74966172
ENSMUSG00000047021.15_74966280_74967185_1	chr1	-	284	3	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	5088	2337	5088	-2337	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTCACCCCAAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	74967185	74966279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74966396_74966755_74966902_74967163
ENSMUSG00000047021.15_74966315_74967251_1	chr1	-	315	3	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	5022	2372	5022	-2372	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGCCCCCGGGGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	74967251	74966314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74966396_74966755_74966902_74967163
ENSMUSG00000047021.15_74966381_74967287_1	chr1	-	285	3	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	4986	2438	4986	-2438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATAGAAATGGCCGAACA	NA	NA	NA	NA	NA	NA	NA	NA	74967287	74966380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74966396_74966755_74966902_74967163
ENSMUSG00000047021.15_74966862_74967534_1	chr1	-	282	3	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	4739	2919	4739	-2919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGAGGACCAGGATCAGG	NA	NA	NA	NA	NA	NA	NA	NA	74967534	74966861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74966902_74967163_74967364_74967492
ENSMUSG00000047021.15_74967303_74968487_1	chr1	-	302	3	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	3786	3360	3786	-3360	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTACTGGAGCCAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	74968487	74967302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74967364_74967492_74967660_74968413
ENSMUSG00000047021.15_74967498_74971021_1	chr1	-	284	3	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	1252	3555	1252	3426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGTGAGAAGGTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	74971021	74967497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74967660_74968413_74968517_74971002
ENSMUSG00000047021.15_74967534_74971087_1	chr1	-	314	3	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	1186	3591	1186	3390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGACACAGTGGAGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	74971087	74967533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74967660_74968413_74968517_74971002
ENSMUSG00000047021.15_74967599_74971125_1	chr1	-	287	3	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	1148	3656	1148	3325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACCTTGCCTTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	74971125	74967598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_74967660_74968413_74968517_74971002
ENSMUSG00000047021.15_74970924_74972273_1	chr1	-	315	2	FSM	ENSMUSG00000047021.15	ENST00000295729.6	315	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTAAAAGGTCACCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	74972273	74970923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_74971188_74972222
ENSMUSG00000047022.19_57350264_57504025_1	chr12	+	1132	9	ISM	ENSMUSG00000047022.19	ENSMUST00000153137.6	2158	13	21305	9802	21305	7	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57350263	57504025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738
ENSMUSG00000047036.9_122682147_122685833_1	chr9	-	1088	3	ISM	ENSMUSG00000047036.9	ENSMUST00000056467.8	2961	6	5360	1168	5360	-1168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATATGAAATTACATCACA	NA	NA	NA	NA	NA	NA	NA	NA	122685833	122682146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_122683054_122683771_122683883_122685763
ENSMUSG00000047036.9_122682413_122686602_1	chr9	-	1042	5	ISM	ENSMUSG00000047036.9	ENST00000396077.8	3128	6	4606	1550	4591	-1434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCATCCTACCGTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	122686602	122682412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_122683054_122683771_122683883_122685763_122685891_122686131_122686227_122686534
ENSMUSG00000047036.9_122682472_122686655_1	chr9	-	1036	5	ISM	ENSMUSG00000047036.9	ENST00000396077.8	3128	6	4553	1609	4538	-1493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCACACTGGAGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	122686655	122682471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_122683054_122683771_122683883_122685763_122685891_122686131_122686227_122686534
ENSMUSG00000047036.9_122682534_122686700_1	chr9	-	1019	5	ISM	ENSMUSG00000047036.9	ENST00000396077.8	3128	6	4508	1671	4493	-1555	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAATGCAGGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	122686700	122682533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_122683054_122683771_122683883_122685763_122685891_122686131_122686227_122686534
ENSMUSG00000047036.9_122682822_122691092_1	chr9	-	1053	6	FSM	ENSMUSG00000047036.9	ENST00000396077.8	3128	6	116	1959	101	-1843	multi-exon	FALSE	canonical	NA	NA	NA	NA	1561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGTATTGAGAAACAATG	NA	NA	NA	NA	NA	NA	NA	NA	122691092	122682821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_122683054_122683771_122683883_122685763_122685891_122686131_122686227_122686534_122686704_122690773
ENSMUSG00000047036.9_122685758_122691087_1	chr9	-	711	4	FSM	ENSMUSG00000047036.9	ENST00000617032.1	832	4	121	0	106	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTATCCCCAGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	122691087	122685757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_122685891_122686131_122686227_122686534_122686704_122690773
ENSMUSG00000047036.9_122685841_122691193_1	chr9	-	734	4	FSM	ENSMUSG00000047036.9	ENST00000617032.1	832	4	15	83	0	-83	multi-exon	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATGTTTGAACTCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	122691193	122685840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_122685891_122686131_122686227_122686534_122686704_122690773
ENSMUSG00000047044.8_18690600_18695097_1	chr19	+	939	2	FSM	ENSMUSG00000047044.8	ENSMUST00000062753.3	1677	2	43	695	0	-695	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTATACAGCTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	18690599	18695097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_18691024_18694582
ENSMUSG00000047044.8_18690719_18695249_1	chr19	+	972	2	FSM	ENSMUSG00000047044.8	ENSMUST00000062753.3	1677	2	162	543	119	-543	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGAGAACTTCCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	18690718	18695249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_18691024_18694582
ENSMUSG00000047084.9_79911063_79914731_1	chr7	+	826	3	FSM	ENSMUSG00000047084.9	ENSMUST00000117989.2	1317	3	100	391	100	-391	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTACGACTGGCTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	79911062	79914731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_79911172_79911568_79911680_79914125
ENSMUSG00000047084.9_79911606_79914901_1	chr7	+	850	2	ISM	ENSMUSG00000047084.9	ENSMUST00000117989.2	1317	3	643	221	643	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTCCGGATCTAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	79911605	79914901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79911680_79914125
ENSMUSG00000047084.9_79911662_79914946_1	chr7	+	839	2	ISM	ENSMUSG00000047084.9	ENSMUST00000117989.2	1317	3	699	176	699	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTCTGTTGAGAACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	79911661	79914946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_79911680_79914125
ENSMUSG00000047090.14_128635974_128639045_1	chr10	-	1947	4	ISM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	1194	69	-658	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAGCAGATCTGTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	128639045	128635973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966
ENSMUSG00000047090.14_128636129_128639063_1	chr10	-	1810	4	ISM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	1176	224	-676	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAAGTGCCTTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	128639063	128636128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966
ENSMUSG00000047090.14_128636300_128640239_1	chr10	-	1940	5	FSM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	0	395	0	-395	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCCTACACTCGTGAATC	NA	NA	NA	NA	NA	NA	NA	NA	128640239	128636299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128640101
ENSMUSG00000047090.14_128636370_128640239_1	chr10	-	1870	5	FSM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	0	465	0	340	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAATGGCACAGAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	128640239	128636369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128640101
ENSMUSG00000047090.14_128636415_128640239_1	chr10	-	1825	5	FSM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	0	510	0	295	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTAAAGGCATGCACCACC	NA	NA	NA	NA	NA	NA	NA	NA	128640239	128636414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128640101
ENSMUSG00000047098.19_55829632_55841121_1	chr14	+	3143	20	FSM	ENSMUSG00000047098.19	ENST00000559275.5	3150	20	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTAGGCTTCTTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	55829631	55841121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_55829773_55829917_55830132_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
ENSMUSG00000047098.19_55829632_55841121_2	chr14	+	3141	20	NNC	ENSMUSG00000047098.19	novel	3150	20	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTAGGCTTCTTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	55829631	55841121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_55829773_55829917_55830132_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838507_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
ENSMUSG00000047098.19_55829632_55841121_3	chr14	+	3138	20	NNC	ENSMUSG00000047098.19	novel	3150	20	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTAGGCTTCTTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	55829631	55841121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_55829773_55829917_55830132_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836365_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
ENSMUSG00000047115.16_49344830_49355538_1	chr6	+	478	3	ISM	ENSMUSG00000047115.16	ENST00000409653.5	673	5	6	6851	6	-6851	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGGAAGCGTGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	49344829	49355538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_49344908_49353037_49353229_49355329
ENSMUSG00000047115.16_49344830_49365885_1	chr6	+	902	6	FSM	ENSMUSG00000047115.16	ENSMUST00000121903.2	1304	6	73	329	6	-329	multi-exon	FALSE	canonical	NA	NA	NA	NA	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTTTCTAATTGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	49344829	49365885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49365750
ENSMUSG00000047115.16_49344830_49365940_1	chr6	+	957	6	FSM	ENSMUSG00000047115.16	ENSMUST00000121903.2	1304	6	73	274	6	-274	multi-exon	FALSE	canonical	NA	NA	NA	NA	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGTGAATTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	49344829	49365940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49365750
ENSMUSG00000047115.16_49349501_49362389_1	chr6	+	764	5	FSM	ENSMUSG00000047115.16	ENST00000344962.9	765	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTTGCGGAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	49349500	49362389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_49349676_49353037_49353229_49355329_49355537_49359896_49360005_49362306
ENSMUSG00000047115.16_49349606_49366152_1	chr6	+	987	5	ISM	ENSMUSG00000047115.16	ENSMUST00000121903.2	1304	6	4849	62	106	-62	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTAATTTTTTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	49349605	49366152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49365750
ENSMUSG00000047126.18_86585481_86621094_1	chr11	-	5028	27	ISM	ENSMUSG00000047126.18	ENSMUST00000060766.16	6163	32	27233	0	27225	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTAGAATTGCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	86621094	86585480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036
ENSMUSG00000047126.18_86585837_86623394_1	chr11	-	4966	29	ISM	ENSMUSG00000047126.18	ENSMUST00000060766.16	6163	32	24933	356	24925	311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAATGAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	86623394	86585836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330
ENSMUSG00000047126.18_86586143_86596913_1	chr11	-	1792	11	ISM	ENSMUSG00000047126.18	ENST00000579456.5	2287	14	51406	-5	51406	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGCTTACTATTCAATC	NA	NA	NA	NA	NA	NA	NA	NA	86596913	86586142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798
ENSMUSG00000047126.18_86586143_86624672_1	chr11	-	1840	12	ISM	ENSMUSG00000047126.18	ENST00000579456.5	2287	14	23647	-5	23647	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGCTTACTATTCAATC	NA	NA	NA	NA	NA	NA	NA	NA	86624672	86586142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596910_86624620
ENSMUSG00000047126.18_86586274_86627980_1	chr11	-	1791	13	ISM	ENSMUSG00000047126.18	ENST00000579456.5	2287	14	20339	126	20339	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTTTGTTCTAACTATA	NA	NA	NA	NA	NA	NA	NA	NA	86627980	86586273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596910_86624620_86624671_86627896
ENSMUSG00000047126.18_86586274_86627980_2	chr11	-	1783	13	NNC	ENSMUSG00000047126.18	novel	2287	14	NA	NA	20339	-126	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTTTGTTCTAACTATA	NA	NA	NA	NA	NA	NA	NA	NA	86627980	86586273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596913_86624631_86624671_86627896
ENSMUSG00000047126.18_86586491_86648137_1	chr11	-	1762	14	FSM	ENSMUSG00000047126.18	ENST00000579456.5	2287	14	182	343	182	-343	multi-exon	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCAGTGTGGCAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	86648137	86586490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596910_86624620_86624671_86627896_86628105_86648073
ENSMUSG00000047126.18_86588126_86648160_1	chr11	-	1716	13	NNC	ENSMUSG00000047126.18	novel	2287	14	NA	NA	159	-1978	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACAAGCTACAGAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	86648160	86588125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596913_86624631_86624671_86627896_86628105_86648073
ENSMUSG00000047126.18_86593033_86648327_1	chr11	-	5053	30	ISM	ENSMUSG00000047126.18	ENSMUST00000060766.16	6163	32	0	7552	0	-6885	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGCTCAGAAGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	86648327	86593032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627884_86628105_86648073
ENSMUSG00000047126.18_86593033_86648327_3	chr11	-	1852	12	ISM	ENSMUSG00000047126.18	ENST00000579456.5	2287	14	-8	6885	0	-6885	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGCTCAGAAGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	86648327	86593032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596910_86624620_86624671_86627896_86628105_86648073
ENSMUSG00000047139.10_43455165_43459322_1	chr10	+	589	2	FSM	ENSMUSG00000047139.10	ENST00000620405.1	590	2	1	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTGAACGTTTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	43455164	43459322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_43455319_43458887
ENSMUSG00000047153.5_56125267_56132387_1	chr14	+	410	5	ISM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	2863	1851	24	-315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGACGCGGACAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	56125266	56132387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
ENSMUSG00000047153.5_56125413_56132400_1	chr14	+	353	4	ISM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	3009	1838	170	-302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGCAATGGTGGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	56125412	56132400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56125475_56131448_56131557_56131743_56131846_56132319
ENSMUSG00000047153.5_56131469_56132512_1	chr14	+	383	3	ISM	ENSMUSG00000047153.5	ENST00000554268.1	753	5	6226	190	6226	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTACTGCCGGGATATTAA	NA	NA	NA	NA	NA	NA	NA	NA	56131468	56132512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56131557_56131743_56131846_56132319
ENSMUSG00000047153.5_56131527_56132555_1	chr14	+	368	3	ISM	ENSMUSG00000047153.5	ENST00000554268.1	753	5	6284	147	6284	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAACTTCTGAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	56131526	56132555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56131557_56131743_56131846_56132319
ENSMUSG00000047153.5_56131823_56132658_1	chr14	+	362	2	ISM	ENSMUSG00000047153.5	ENST00000554268.1	753	5	6580	44	6580	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACCTAGACCCACTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	56131822	56132658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56131846_56132319
ENSMUSG00000047181.13_94900953_94910942_1	chr11	+	859	4	ISM	ENSMUSG00000047181.13	ENSMUST00000055947.10	3318	10	248	5971	248	-5971	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCCGCCACCTCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	94900952	94910942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94901403_94905177_94905233_94910186_94910354_94910755
ENSMUSG00000047181.13_94901107_94912089_1	chr11	+	873	5	ISM	ENSMUSG00000047181.13	ENSMUST00000055947.10	3318	10	402	4824	402	-4824	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGAAATTCCTGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	94901106	94912089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94901403_94905177_94905233_94910186_94910354_94910755_94911045_94912023
ENSMUSG00000047181.13_94901299_94912466_1	chr11	+	870	7	ISM	ENSMUSG00000047181.13	ENSMUST00000055947.10	3318	10	594	4447	594	-4447	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTACCACCTCCCCGACC	NA	NA	NA	NA	NA	NA	NA	NA	94901298	94912466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94901403_94905177_94905233_94910186_94910354_94910755_94911045_94912023_94912112_94912211_94912287_94912374
ENSMUSG00000047181.13_94910210_94914166_1	chr11	+	838	6	ISM	ENSMUSG00000047181.13	ENSMUST00000055947.10	3318	10	9505	2747	9505	-2747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCCCTACCACACGCTG	NA	NA	NA	NA	NA	NA	NA	NA	94910209	94914166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94910354_94910755_94911045_94912023_94912112_94912211_94912287_94912374_94912535_94914084
ENSMUSG00000047181.13_94910863_94915460_1	chr11	+	838	7	ISM	ENSMUSG00000047181.13	ENSMUST00000055947.10	3318	10	10158	1453	10158	-1453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCAGCGGCTGCTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	94910862	94915460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94911045_94912023_94912112_94912211_94912287_94912374_94912535_94914084_94914205_94914285_94914442_94915403
ENSMUSG00000047181.13_94912222_94915772_1	chr11	+	870	5	ISM	ENSMUSG00000047181.13	ENSMUST00000055947.10	3318	10	11517	1141	11517	-1141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGCAGATGAAGAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	94912221	94915772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94912287_94912374_94912535_94914084_94914205_94914285_94914442_94915403
ENSMUSG00000047181.13_94914284_94916132_1	chr11	+	887	2	ISM	ENSMUSG00000047181.13	ENSMUST00000055947.10	3318	10	13579	781	13579	-781	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAAGGGAGCTCTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	94914283	94916132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94914442_94915403
ENSMUSG00000047181.13_94914361_94916164_1	chr11	+	842	2	ISM	ENSMUSG00000047181.13	ENSMUST00000055947.10	3318	10	13656	749	13656	-749	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCTCCCTCACCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	94914360	94916164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_94914442_94915403
ENSMUSG00000047213.15_16237400_16259179_1	chr3	+	1500	3	ISM	ENSMUSG00000047213.15	ENST00000617200.1	5051	4	62	12019	0	-9380	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGTAATAAGCGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	16237399	16259179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_16237685_16238085_16238111_16257989
ENSMUSG00000047213.15_16237400_16268351_1	chr3	+	2222	5	FSM	ENSMUSG00000047213.15	ENST00000621957.4	2373	5	-57	208	0	-208	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTCATGAAGCACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	16237399	16268351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_16237685_16238085_16238111_16243647_16243728_16257989_16259589_16268118
ENSMUSG00000047213.15_16237400_16268432_1	chr3	+	2348	5	FSM	ENSMUSG00000047213.15	ENST00000623280.3	5176	5	62	2766	0	-127	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGACTGAATGAATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	16237399	16268432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_16237685_16238085_16238111_16243602_16243728_16257989_16259589_16268118
ENSMUSG00000047213.15_16237514_16259263_1	chr3	+	1470	3	ISM	ENSMUSG00000047213.15	ENST00000617200.1	5051	4	176	11935	57	-9296	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACATTTTTGTGGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	16237513	16259263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_16237685_16238085_16238111_16257989
ENSMUSG00000047213.15_16237568_16268487_1	chr3	+	2190	5	FSM	ENSMUSG00000047213.15	ENST00000621957.4	2373	5	111	72	111	-72	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTTATCCATTAGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	16237567	16268487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_16237685_16238085_16238111_16243647_16243728_16257989_16259589_16268118
ENSMUSG00000047213.15_16237568_16268487_2	chr3	+	2171	4	NIC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	111	-72	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTTATCCATTAGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	16237567	16268487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_+_16237685_16243641_16243728_16257989_16259589_16268118
ENSMUSG00000047213.15_16237577_16259325_1	chr3	+	1469	3	ISM	ENSMUSG00000047213.15	ENST00000617200.1	5051	4	239	11873	120	-9234	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTCTCAGGATAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	16237576	16259325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_16237685_16238085_16238111_16257989
ENSMUSG00000047213.15_16258408_16269242_1	chr3	+	2302	2	NNC	ENSMUSG00000047213.15	novel	5051	4	NA	NA	20951	72	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTAACATCCTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	16258407	16269242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_16259589_16268121
ENSMUSG00000047213.15_16258582_16269397_1	chr3	+	2286	2	ISM	ENSMUSG00000047213.15	ENSMUST00000191774.6	3196	6	21182	-227	21125	227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGAAAGGAGAAAGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	16258581	16269397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_16259589_16268118
ENSMUSG00000047215.15_65545707_65548197_1	chr5	-	622	6	ISM	ENSMUSG00000047215.15	ENSMUST00000057885.13	738	8	590	0	151	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65548197	65545706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081
ENSMUSG00000047215.15_65546020_65548787_1	chr5	-	545	7	FSM	ENSMUSG00000047215.15	ENSMUST00000120094.5	680	7	-64	199	0	-199	multi-exon	FALSE	canonical	NA	NA	NA	NA	1817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGATTCAGCAAGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	65548787	65546019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ENSMUSG00000047215.15_65546414_65548787_1	chr5	-	542	6	ISM	ENSMUSG00000047215.15	ENSMUST00000120094.5	680	7	-64	593	0	-593	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTATATTTGTCATAAC	NA	NA	NA	NA	NA	NA	NA	NA	65548787	65546413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ENSMUSG00000047220.6_108281168_108298695_1	chr9	-	2398	6	ISM	ENSMUSG00000047220.6	ENSMUST00000076592.4	2890	7	6988	358	6988	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACAGAGTATTAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	108298695	108281167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108283054_108283809_108283914_108289691_108289780_108290161_108290211_108294520_108294685_108298588
ENSMUSG00000047221.6_21630295_21660857_1	chr5	+	719	5	NNC	ENSMUSG00000047221.6	novel	746	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGACAACAGAAGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	21630294	21660857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_21630575_21634721_21634832_21638688_21638782_21643697_21643856_21660779
ENSMUSG00000047221.6_21630295_21660857_2	chr5	+	742	6	ISM	ENSMUSG00000047221.6	ENSMUST00000056045.5	3027	8	339	26265	0	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGACAACAGAAGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	21630294	21660857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21630575_21634721_21634832_21638688_21638782_21643697_21643837_21652313_21652356_21660779
ENSMUSG00000047221.6_21630295_21660857_3	chr5	+	739	6	NNC	ENSMUSG00000047221.6	novel	746	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1265	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGACAACAGAAGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	21630294	21660857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_21630579_21634728_21634832_21638688_21638782_21643697_21643837_21652313_21652356_21660779
ENSMUSG00000047221.6_21630295_21660857_4	chr5	+	735	6	NNC	ENSMUSG00000047221.6	novel	746	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1232	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGACAACAGAAGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	21630294	21660857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_21630575_21634721_21634832_21638688_21638782_21643697_21643830_21652313_21652356_21660779
ENSMUSG00000047221.6_21634787_21664176_1	chr5	+	435	6	ISM	ENSMUSG00000047221.6	ENST00000413034.3	994	8	4476	21264	4476	3319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTTCTCTACGAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	21634786	21664176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_21634832_21638688_21638782_21643697_21643837_21652313_21652356_21660779_21660876_21664156
ENSMUSG00000047230.7_138699193_138710108_1	chrX	+	936	2	FSM	ENSMUSG00000047230.7	ENST00000540876.1	2957	2	-1	2022	-1	-2022	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGAGTTCAACTCATAC	NA	NA	NA	NA	NA	NA	NA	NA	138699192	138710108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_138699295_138709274
ENSMUSG00000047248.21_100021488_100045056_1	chr7	+	1339	7	NNC	ENSMUSG00000047248.21	novel	1372	7	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2644	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTCTAGCTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	100021487	100045056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_100021704_100023470_100023741_100029174_100029333_100039285_100039510_100040139_100040388_100044383_100044512_100044961
ENSMUSG00000047248.21_100021488_100045056_2	chr7	+	1344	7	ISM	ENSMUSG00000047248.21	ENSMUST00000098259.11	6602	32	48	73612	24	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTCTAGCTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	100021487	100045056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_100021704_100023470_100023741_100029174_100029333_100039285_100039510_100040139_100040388_100044374_100044508_100044961
ENSMUSG00000047248.21_100021488_100045056_3	chr7	+	1341	7	NNC	ENSMUSG00000047248.21	novel	1372	7	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3405	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTCTAGCTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	100021487	100045056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_100021704_100023477_100023741_100029174_100029333_100039285_100039510_100040139_100040388_100044374_100044512_100044961
ENSMUSG00000047248.21_100021488_100045056_4	chr7	+	1341	7	NNC	ENSMUSG00000047248.21	novel	1372	7	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2017	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTCTAGCTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	100021487	100045056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_100021704_100023470_100023741_100029174_100029333_100039285_100039510_100040146_100040388_100044374_100044512_100044961
ENSMUSG00000047250.14_36120438_36127340_1	chr2	+	362	3	ISM	ENSMUSG00000047250.14	ENSMUST00000062069.6	2867	11	0	14944	0	-14061	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGACTCCAGTCCCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	36120437	36127340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_36120582_36120679_36120776_36127218
ENSMUSG00000047250.14_36120568_36127803_1	chr2	+	368	4	ISM	ENSMUSG00000047250.14	ENSMUST00000062069.6	2867	11	130	14481	130	-13598	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTGTGGGGCTGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	36120567	36127803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_36120582_36120679_36120776_36127218_36127336_36127662
ENSMUSG00000047250.14_36127216_36142042_1	chr2	+	2043	10	FSM	ENSMUSG00000047250.14	ENST00000223423.8	2041	10	0	-2	0	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	2818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGACACAGAACAAAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	36127215	36142042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_36127336_36127662_36127804_36127968_36128113_36130607_36130790_36130882_36130967_36132774_36133022_36135055_36135232_36139107_36139256_36141007_36141663_36141896
ENSMUSG00000047250.14_36127320_36142042_1	chr2	+	1939	10	FSM	ENSMUSG00000047250.14	ENST00000223423.8	2041	10	104	-2	99	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGACACAGAACAAAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	36127319	36142042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_36127336_36127662_36127804_36127968_36128113_36130607_36130790_36130882_36130967_36132774_36133022_36135055_36135232_36139107_36139256_36141007_36141663_36141896
ENSMUSG00000047250.14_36128075_36132798_1	chr2	+	328	4	ISM	ENSMUSG00000047250.14	ENST00000540753.6	1631	9	854	8603	854	-8603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCGTGGAACAGGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	36128074	36132798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_36128113_36130607_36130790_36130882_36130967_36132774
ENSMUSG00000047250.14_36130902_36135092_1	chr2	+	349	3	ISM	ENSMUSG00000047250.14	ENST00000540753.6	1631	9	3681	6309	3681	-6309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTGAGTGGCTATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	36130901	36135092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_36130967_36132774_36133022_36135055
ENSMUSG00000047250.14_36135110_36139192_1	chr2	+	318	2	ISM	ENSMUSG00000047250.14	ENSMUST00000062069.6	2867	11	14672	3092	7889	-2209	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTCAATGAATACCGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	36135109	36139192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_36135343_36139107
ENSMUSG00000047250.14_36135187_36141038_1	chr2	+	335	3	ISM	ENSMUSG00000047250.14	ENSMUST00000062069.6	2867	11	14749	1246	7966	-363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTACGGTGACATCGATG	NA	NA	NA	NA	NA	NA	NA	NA	36135186	36141038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_36135343_36139107_36139256_36141007
ENSMUSG00000047250.14_36135282_36141150_1	chr2	+	352	3	ISM	ENSMUSG00000047250.14	ENSMUST00000062069.6	2867	11	14844	1134	8061	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGGGCCTCCTAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	36135281	36141150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_36135343_36139107_36139256_36141007
ENSMUSG00000047260.5_73066860_73067863_1	chr11	-	817	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	0	515	0	302	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTAACAGTTCGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	73067863	73066859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_73067578_73067764
ENSMUSG00000047342.18_62671315_62675779_1	chr11	-	627	3	NNC	ENSMUSG00000047342.18	novel	669	3	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCGGTACTTATCCGACAC	NA	NA	NA	NA	NA	NA	NA	NA	62675779	62671314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_62671786_62674506_62674588_62675704
ENSMUSG00000047342.18_62671315_62675779_2	chr11	-	636	3	FSM	ENSMUSG00000047342.18	ENST00000472486.5	669	3	33	0	33	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCGGTACTTATCCGACAC	NA	NA	NA	NA	NA	NA	NA	NA	62675779	62671314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_62671786_62674497_62674588_62675704
ENSMUSG00000047371.8_126941967_126944447_2	chr7	-	2118	3	FSM	ENSMUSG00000047371.8	ENST00000380412.7	2231	3	113	0	113	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTCGTCCTTAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	126944447	126941966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126943643_126943723_126944039_126944320
ENSMUSG00000047379.8_5089149_5090481_1	chr19	+	1059	2	FSM	ENSMUSG00000047379.8	ENSMUST00000053705.8	2032	2	295	678	214	-677	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGTTGAAGGCTAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	5089148	5090481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5090061_5090334
ENSMUSG00000047379.8_5089210_5090523_1	chr19	+	1040	2	FSM	ENSMUSG00000047379.8	ENSMUST00000053705.8	2032	2	356	636	275	-635	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTTGTCTTCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	5089209	5090523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5090061_5090334
ENSMUSG00000047379.8_5089812_5091158_1	chr19	+	1073	2	FSM	ENSMUSG00000047379.8	ENSMUST00000053705.8	2032	2	958	1	877	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGGCTCTGTTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	5089811	5091158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5090061_5090334
ENSMUSG00000047388.11_117679677_117683098_1	chr8	+	369	3	ISM	ENSMUSG00000047388.11	ENST00000564241.5	2482	4	66	3909	66	-3909	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGAACCGGATGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	117679676	117683098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_117679739_117681452_117681653_117682991
ENSMUSG00000047388.11_117681546_117683246_1	chr8	+	362	2	ISM	ENSMUSG00000047388.11	ENST00000564241.5	2482	4	1935	3761	1935	-3761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCATGCAGTTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	117681545	117683246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_117681653_117682991
ENSMUSG00000047388.11_117681601_117683307_1	chr8	+	368	2	ISM	ENSMUSG00000047388.11	ENST00000564241.5	2482	4	1990	3700	1990	-3700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGTGTTAGGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	117681600	117683307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_117681653_117682991
ENSMUSG00000047388.11_117684769_117687007_1	chr8	+	377	2	ISM	ENSMUSG00000047388.11	ENST00000564241.5	2482	4	5158	0	5158	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGTTTTTGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	117684768	117687007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_117684957_117686818
ENSMUSG00000047394.10_89262051_89263305_1	chr15	-	285	4	FSM	ENSMUSG00000047394.10	ENST00000403326.5	503	4	106	112	106	-112	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGAATCCTATGATCTAC	NA	NA	NA	NA	NA	NA	NA	NA	89263305	89262050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_89262076_89262302_89262425_89262537_89262643_89263272
ENSMUSG00000047414.7_95659158_95747584_1	chr12	+	2557	2	FSM	ENSMUSG00000047414.7	ENST00000554746.1	3241	2	23	661	23	-297	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCCAACAACATGAGATAC	NA	NA	NA	NA	NA	NA	NA	NA	95659157	95747584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_95659411_95745280
ENSMUSG00000047414.7_95659280_95747712_1	chr12	+	2563	2	FSM	ENSMUSG00000047414.7	ENST00000554746.1	3241	2	145	533	145	-169	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGACACGCAAATTACA	NA	NA	NA	NA	NA	NA	NA	NA	95659279	95747712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_95659411_95745280
ENSMUSG00000047417.19_80376759_80386471_1	chr10	-	4525	14	ISM	ENSMUSG00000047417.19	ENSMUST00000057910.16	5250	15	10923	0	-3835	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAAAGCCCAGGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	80386471	80376758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166
ENSMUSG00000047417.19_80376954_80386678_1	chr10	-	4537	14	ISM	ENSMUSG00000047417.19	ENSMUST00000057910.16	5250	15	10716	195	-4042	-195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGGACTGCAAGCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	80386678	80376953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166
ENSMUSG00000047417.19_80376997_80386736_1	chr10	-	4552	14	ISM	ENSMUSG00000047417.19	ENSMUST00000057910.16	5250	15	10658	238	-4100	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGGTCAGGGTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	80386736	80376996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166
ENSMUSG00000047417.19_80377243_80397173_1	chr10	-	4545	15	FSM	ENSMUSG00000047417.19	ENSMUST00000057910.16	5250	15	221	484	221	-484	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTCCTTTTTGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	80397173	80377242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ENSMUSG00000047443.15_91297119_91300308_1	chr1	+	822	6	ISM	ENSMUSG00000047443.15	ENSMUST00000086861.12	2815	8	2967	1631	2967	-1631	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCACTGTATTCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	91297118	91300308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91297196_91297807_91298065_91298136_91298246_91298346_91298438_91299103_91299183_91300099
ENSMUSG00000047446.19_40086280_40087854_1	chr12	-	571	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	170	459	170	-459	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCATCGACTCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	40087854	40086279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_40086833_40087836
ENSMUSG00000047454.13_78273528_78730867_1	chr12	+	2555	25	FSM	ENSMUSG00000047454.13	ENST00000543237.5	2456	25	0	-99	0	99	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTCAACAGACAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	78273527	78730867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78481947_78481987_78501530_78501626_78528072_78528140_78538811_78539085_78551390_78551526_78569671_78569729_78579430_78579473_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
ENSMUSG00000047459.15_155078453_155092013_1	chr2	+	502	4	FSM	ENSMUSG00000047459.15	ENSMUST00000109682.9	684	4	-2	184	-2	-42	multi-exon	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCCACCCCACAAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	155078452	155092013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_155078538_155084650_155084727_155089690_155089859_155091840
ENSMUSG00000047459.15_155084650_155092013_1	chr2	+	412	3	NNC	ENSMUSG00000047459.15	novel	684	4	NA	NA	6122	-42	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCCACCCCACAAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	155084649	155092013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_155084727_155089690_155089859_155091846
ENSMUSG00000047507.13_25463132_25464512_1	chr17	-	592	7	ISM	ENSMUSG00000047507.13	ENST00000397488.6	3785	33	6600	793	6600	-636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCAAAGCTCGCACG	NA	NA	NA	NA	NA	NA	NA	NA	25464512	25463131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25463204_25463282_25463404_25463484_25463566_25463726_25463799_25464110_25464220_25464289_25464370_25464455
ENSMUSG00000047507.13_25466492_25468123_1	chr17	-	582	6	ISM	ENSMUSG00000047507.13	ENST00000397488.6	3785	33	2989	4153	2989	-3996	internal_fragment	TRUE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGCTGTGTATCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	25468123	25466491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25466583_25467000_25467122_25467244_25467349_25467445_25467542_25467629_25467738_25468061
ENSMUSG00000047507.13_25467275_25469163_1	chr17	-	611	7	ISM	ENSMUSG00000047507.13	ENST00000397488.6	3785	33	1949	4936	1949	-4779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCTTTCCCCTTTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	25469163	25467274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25467349_25467445_25467542_25467629_25467738_25468061_25468165_25468288_25468367_25468488_25468534_25469056
ENSMUSG00000047507.13_25468105_25470167_1	chr17	-	599	7	ISM	ENSMUSG00000047507.13	ENST00000397488.6	3785	33	945	5766	945	-5609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACTGATGACTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	25470167	25468104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25468165_25468288_25468367_25468488_25468534_25469056_25469253_25469366_25469434_25469569_25469630_25470074
ENSMUSG00000047507.13_25468325_25470480_1	chr17	-	587	7	ISM	ENSMUSG00000047507.13	ENST00000397488.6	3785	33	632	5986	632	-5829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAATGAAGTTATTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	25470480	25468324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25468367_25468488_25468534_25469056_25469253_25469366_25469434_25469569_25469630_25470074_25470183_25470411
ENSMUSG00000047507.13_25469179_25471064_1	chr17	-	614	7	ISM	ENSMUSG00000047507.13	ENST00000397488.6	3785	33	48	6840	48	-6683	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCAGCGCTTTGGCTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	25471064	25469178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25469253_25469366_25469434_25469569_25469630_25470074_25470183_25470411_25470549_25470705_25470794_25470984
ENSMUSG00000047518.4_120390180_120393720_1	chr4	+	1260	3	NNC	ENSMUSG00000047518.4	novel	1262	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1069	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGATGTGGGCTAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	120390179	120393720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_120390786_120392144_120392673_120393594
ENSMUSG00000047518.4_120390180_120393720_2	chr4	+	1263	3	FSM	ENSMUSG00000047518.4	ENST00000372613.6	1262	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGATGTGGGCTAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	120390179	120393720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_120390786_120392141_120392673_120393594
ENSMUSG00000047534.18_65179620_65195899_1	chr12	-	1819	7	ISM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	23455	112	23441	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCCGTTGTTTTAACAT	NA	NA	NA	NA	NA	NA	NA	NA	65195899	65179619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495
ENSMUSG00000047534.18_65179807_65196060_1	chr12	-	1793	7	ISM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	23294	299	23280	-299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTGTTTGTGAAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	65196060	65179806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495
ENSMUSG00000047534.18_65180189_65199568_1	chr12	-	1782	8	ISM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	19786	681	19772	-681	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTATAGAGCATTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	65199568	65180188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461
ENSMUSG00000047534.18_65180299_65200645_1	chr12	-	1774	9	ISM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	18709	791	18695	-791	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGCAGGAATTTTACCAT	NA	NA	NA	NA	NA	NA	NA	NA	65200645	65180298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579
ENSMUSG00000047534.18_65185478_65205258_1	chr12	-	1776	9	ISM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	14096	5970	14082	-5970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCACTACTCCACAATG	NA	NA	NA	NA	NA	NA	NA	NA	65205258	65185477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168
ENSMUSG00000047534.18_65190104_65205635_1	chr12	-	1795	7	ISM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	13719	10596	13705	5704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGAACTGCTGATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	65205635	65190103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168
ENSMUSG00000047534.18_65195537_65208261_1	chr12	-	1776	7	ISM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	11093	16029	11079	271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAAGAATGGAGTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	65208261	65195536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176
ENSMUSG00000047534.18_65195669_65208397_1	chr12	-	1780	7	ISM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	10957	16161	10943	139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGAGACCTCGATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	65208397	65195668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176
ENSMUSG00000047534.18_65196187_65219340_1	chr12	-	1785	8	ISM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	14	16679	0	-379	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATGTATAGACTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	65219340	65196186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ENSMUSG00000047539.10_182144028_182153959_1	chr1	-	964	2	ISM	ENSMUSG00000047539.10	ENST00000424254.6	1312	4	15214	-46	15214	46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTTTTAAAAAGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	182153959	182144027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_182144851_182153818
ENSMUSG00000047539.10_182144239_182157549_1	chr1	-	862	3	ISM	ENSMUSG00000047539.10	ENST00000424254.6	1312	4	11624	165	11624	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTATCGTGTTTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	182157549	182144238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_182144851_182153818_182153958_182157438
ENSMUSG00000047539.10_182144302_182169136_1	chr1	-	1047	4	FSM	ENSMUSG00000047539.10	ENST00000424254.6	1312	4	37	228	37	-228	multi-exon	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGGTGGAGCTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	182169136	182144301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_182144851_182153818_182153958_182157438_182157549_182168887
ENSMUSG00000047539.10_182144406_182169136_2	chr1	-	943	4	FSM	ENSMUSG00000047539.10	ENST00000424254.6	1312	4	37	332	37	-332	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTACTCCTGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	182169136	182144405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_182144851_182153818_182153958_182157438_182157549_182168887
ENSMUSG00000047547.15_54740214_54759105_1	chr13	-	2127	5	NNC	ENSMUSG00000047547.15	novel	2186	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAAAGACTGTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	54759105	54740213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_54741856_54746534_54746647_54746856_54746975_54754463_54754504_54758890
ENSMUSG00000047547.15_54740214_54759105_2	chr13	-	2129	5	NNC	ENSMUSG00000047547.15	novel	2186	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAAAGACTGTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	54759105	54740213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_54741856_54746534_54746647_54746861_54746975_54754456_54754504_54758890
ENSMUSG00000047547.15_54740214_54759105_3	chr13	-	2134	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	52	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAAAGACTGTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	54759105	54740213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
ENSMUSG00000047547.15_54740214_54759105_4	chr13	-	2125	5	NNC	ENSMUSG00000047547.15	novel	2186	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAAAGACTGTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	54759105	54740213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754495_54758890
ENSMUSG00000047554.15_109573679_109585658_1	chr7	-	1555	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	0	2285	0	-987	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCTGACTAATGACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	109585658	109573678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
ENSMUSG00000047557.3_67365529_67368278_1	chr3	-	219	3	ISM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	2981	198	2981	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGCTAACCACGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	67368278	67365528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_67365661_67365926_67365990_67368254
ENSMUSG00000047557.3_67365647_67368391_1	chr3	-	214	3	ISM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	2868	316	2868	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGCAAGTCCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	67368391	67365646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_67365661_67365926_67365990_67368254
ENSMUSG00000047557.3_67368299_67368753_1	chr3	-	202	2	ISM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	2506	2968	2506	-2968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACATGGTATAAAATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	67368753	67368298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_67368392_67368644
ENSMUSG00000047557.3_67368349_67368810_1	chr3	-	209	2	ISM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	2449	3018	2449	-3018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCCTGGGTCGCCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	67368810	67368348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_67368392_67368644
ENSMUSG00000047557.3_67368690_67370939_1	chr3	-	217	3	ISM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	320	3359	320	-3359	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGTCTCTGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	67370939	67368689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_67368823_67369691_67369755_67370918
ENSMUSG00000047557.3_67368750_67370988_1	chr3	-	206	3	ISM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	271	3419	271	-3419	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATTCGAAGGAGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	67370988	67368749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_67368823_67369691_67369755_67370918
ENSMUSG00000047565.6_20666069_20666419_1	chr15	-	274	2	Genic_Genomic	ENSMUSG00000047565.6	novel	1537	1	NA	NA	417	-769	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAGAAGAGCTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	20666419	20666068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	Genic_Genomic_chr15_-_20666105_20666181
ENSMUSG00000047617.12_25349692_25350991_1	chr2	-	668	7	FSM	ENSMUSG00000047617.12	ENSMUST00000114261.9	981	7	115	198	115	-198	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTGATGAGACCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	25350991	25349691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_25349714_25349786_25349872_25350020_25350087_25350178_25350370_25350456_25350507_25350666_25350728_25350798
ENSMUSG00000047635.7_124466161_124479210_1	chr5	+	980	3	FSM	ENSMUSG00000047635.7	ENSMUST00000077376.3	1677	3	0	697	0	-697	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATGGGGTTGCTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	124466160	124479210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_124466293_124476689_124476999_124478671
ENSMUSG00000047635.7_124466276_124479239_1	chr5	+	894	3	FSM	ENSMUSG00000047635.7	ENSMUST00000077376.3	1677	3	115	668	115	-668	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAACTACAGCTCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	124466275	124479239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_124466293_124476689_124476999_124478671
ENSMUSG00000047635.7_124476789_124479356_1	chr5	+	895	2	ISM	ENSMUSG00000047635.7	ENSMUST00000077376.3	1677	3	10628	551	10628	-551	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCCTGGCTGTCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	124476788	124479356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124476999_124478671
ENSMUSG00000047635.7_124476859_124479451_1	chr5	+	920	2	ISM	ENSMUSG00000047635.7	ENSMUST00000077376.3	1677	3	10698	456	10698	-456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCGCCACCACACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	124476858	124479451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124476999_124478671
ENSMUSG00000047638.16_89290568_89334129_1	chr10	-	1051	7	NNC	ENSMUSG00000047638.16	novel	1202	7	NA	NA	144	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCAGTGGGGCTGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	89334129	89290567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_89290811_89292392_89292507_89309613_89309753_89314211_89314312_89314639_89314739_89316352_89316490_89333910
ENSMUSG00000047638.16_89290568_89334129_2	chr10	-	1059	7	FSM	ENSMUSG00000047638.16	ENST00000549996.5	1202	7	144	-1	144	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCAGTGGGGCTGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	89334129	89290567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_89290811_89292392_89292507_89309613_89309761_89314211_89314312_89314639_89314739_89316352_89316490_89333910
ENSMUSG00000047638.16_89290568_89334226_1	chr10	-	1149	7	NNC	ENSMUSG00000047638.16	novel	1202	7	NA	NA	47	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCAGTGGGGCTGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	89334226	89290567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_89290811_89292392_89292507_89309613_89309761_89314211_89314305_89314639_89314739_89316352_89316490_89333910
ENSMUSG00000047649.10_19091105_19093046_1	chr7	-	869	2	ISM	ENSMUSG00000047649.10	ENSMUST00000047036.10	2239	3	360	1166	360	-1166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCCCCTGGAGTACTCA	NA	NA	NA	NA	NA	NA	NA	NA	19093046	19091104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19091942_19093014
ENSMUSG00000047649.10_19091148_19093105_1	chr7	-	885	2	ISM	ENSMUSG00000047649.10	ENSMUST00000047036.10	2239	3	301	1209	301	-1209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAAGGAAAAGAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	19093105	19091147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19091942_19093014
ENSMUSG00000047649.10_19091263_19093408_1	chr7	-	917	3	FSM	ENSMUSG00000047649.10	ENSMUST00000047036.10	2239	3	-2	1324	-2	-1324	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGAAGGAAGCTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	19093408	19091262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_19091942_19093014_19093157_19093312
ENSMUSG00000047656.10_6973701_6976103_1	chr19	+	754	6	ISM	ENSMUSG00000047656.10	ENSMUST00000088223.7	1103	7	161	311	161	-270	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAAGGAGGCCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	6973700	6976103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6973893_6974063_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976025
ENSMUSG00000047656.10_6973809_6976307_1	chr19	+	727	7	FSM	ENSMUSG00000047656.10	ENSMUST00000088223.7	1103	7	269	107	-252	-66	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCAAGCTCAGTTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	6973808	6976307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6973893_6974063_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976025_6976137_6976259
ENSMUSG00000047656.10_6974064_6976412_1	chr19	+	637	5	FSM	ENSMUSG00000047656.10	ENST00000546089.5	601	5	3	-39	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTTGTGGTTCCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	6974063	6976412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976259
ENSMUSG00000047656.10_6974064_6976412_2	chr19	+	632	5	NNC	ENSMUSG00000047656.10	novel	1103	7	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTTGTGGTTCCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	6974063	6976412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976264
ENSMUSG00000047675.16_117011024_117013338_1	chr4	-	749	6	NNC	ENSMUSG00000047675.16	novel	860	6	NA	NA	102	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTTTGGAGAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	117013338	117011023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_117011185_117011495_117011617_117011834_117012011_117012204_117012305_117012767_117012875_117013254
ENSMUSG00000047675.16_117011024_117013338_2	chr4	-	758	6	FSM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	102	0	102	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTTTGGAGAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	117013338	117011023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013254
ENSMUSG00000047712.9_8081426_8394589_1	chr10	-	2335	9	FSM	ENSMUSG00000047712.9	ENST00000367463.5	2320	9	-15	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCCTTTCCATTAATC	NA	NA	NA	NA	NA	NA	NA	NA	8394589	8081425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_8081776_8082815_8083435_8121666_8121825_8123852_8123951_8173819_8173974_8183171_8183252_8205831_8205988_8266651_8266696_8393913
ENSMUSG00000047712.9_8081426_8394589_2	chr10	-	2327	9	NNC	ENSMUSG00000047712.9	novel	2320	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCCTTTCCATTAATC	NA	NA	NA	NA	NA	NA	NA	NA	8394589	8081425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_8081768_8082815_8083435_8121666_8121825_8123852_8123951_8173819_8173974_8183171_8183252_8205831_8205988_8266651_8266696_8393913
ENSMUSG00000047712.9_8081426_8394589_3	chr10	-	2333	9	NNC	ENSMUSG00000047712.9	novel	2320	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCCTTTCCATTAATC	NA	NA	NA	NA	NA	NA	NA	NA	8394589	8081425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_8081776_8082815_8083435_8121666_8121825_8123852_8123951_8173819_8173974_8183173_8183252_8205831_8205988_8266651_8266696_8393913
ENSMUSG00000047712.9_8081426_8394589_4	chr10	-	2327	9	NNC	ENSMUSG00000047712.9	novel	2320	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCCTTTCCATTAATC	NA	NA	NA	NA	NA	NA	NA	NA	8394589	8081425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_8081776_8082815_8083435_8121666_8121825_8123852_8123951_8173819_8173966_8183171_8183252_8205831_8205988_8266651_8266696_8393913
ENSMUSG00000047712.9_8081426_8394589_5	chr10	-	2330	9	NNC	ENSMUSG00000047712.9	novel	2320	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCCTTTCCATTAATC	NA	NA	NA	NA	NA	NA	NA	NA	8394589	8081425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_8081776_8082815_8083435_8121666_8121825_8123852_8123951_8173819_8173974_8183171_8183252_8205831_8205988_8266656_8266696_8393913
ENSMUSG00000047712.9_8081426_8394589_6	chr10	-	2328	9	NNC	ENSMUSG00000047712.9	novel	2320	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCCTTTCCATTAATC	NA	NA	NA	NA	NA	NA	NA	NA	8394589	8081425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_8081776_8082815_8083428_8121666_8121825_8123852_8123951_8173819_8173974_8183171_8183252_8205831_8205988_8266651_8266696_8393913
ENSMUSG00000047714.15_31071309_31080109_1	chr16	-	2568	4	ISM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	13986	954	13701	-954	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGGCATTGGGAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	31080109	31071308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047
ENSMUSG00000047714.15_31071446_31084230_1	chr16	-	2555	5	ISM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	9865	1091	9580	-1091	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCCTAAAACTTAAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	31084230	31071445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122
ENSMUSG00000047714.15_31071743_31093971_1	chr16	-	2566	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	124	1388	124	-1388	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTTCACTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	31093971	31071742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ENSMUSG00000047714.15_31076793_31093688_1	chr16	-	836	5	FSM	ENSMUSG00000047714.15	ENSMUST00000115233.2	958	5	122	0	122	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTGCTTTGTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	31093688	31076792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ENSMUSG00000047714.15_31076895_31093810_1	chr16	-	856	5	FSM	ENSMUSG00000047714.15	ENSMUST00000115233.2	958	5	0	102	0	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTAAAGCTTAAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	31093810	31076894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ENSMUSG00000047719.3_148519819_148528723_1	chr4	-	1620	2	FSM	ENSMUSG00000047719.3	ENSMUST00000051633.3	2992	2	505	867	505	-867	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTCTGTTTCCAGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	148528723	148519818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_148521100_148528384
ENSMUSG00000047719.3_148519867_148528790_1	chr4	-	1639	2	FSM	ENSMUSG00000047719.3	ENSMUST00000051633.3	2992	2	438	915	438	-915	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCCTCCCCTGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	148528790	148519866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_148521100_148528384
ENSMUSG00000047719.3_148519926_148528832_1	chr4	-	1622	2	FSM	ENSMUSG00000047719.3	ENSMUST00000051633.3	2992	2	396	974	396	-974	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGACCTGAAGTGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	148528832	148519925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_148521100_148528384
ENSMUSG00000047747.11_83590266_83762750_1	chr8	+	1231	5	ISM	ENSMUSG00000047747.11	ENST00000306799.7	2272	7	9	48135	9	-48135	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCACAGCACAGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	83590265	83762750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_83591120_83716975_83717101_83730203_83730276_83732958_83733042_83762653
ENSMUSG00000047747.11_83590443_83769413_1	chr8	+	1267	6	ISM	ENSMUSG00000047747.11	ENST00000306799.7	2272	7	186	41472	186	-41472	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACTGTGGTTCAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	83590442	83769413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_83591120_83716975_83717101_83730203_83730276_83732958_83733042_83762653_83762751_83769200
ENSMUSG00000047747.11_83590582_83810172_1	chr8	+	1234	7	FSM	ENSMUSG00000047747.11	ENST00000306799.7	2272	7	325	713	325	-713	multi-exon	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATCTTGAGATGGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	83590581	83810172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_83591120_83716975_83717101_83730203_83730276_83732958_83733042_83762653_83762751_83769200_83769412_83810064
ENSMUSG00000047747.11_83590774_83810368_1	chr8	+	1236	7	NNC	ENSMUSG00000047747.11	novel	2272	7	NA	NA	517	-517	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACAGCCTGTGGCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	83590773	83810368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_83591120_83716977_83717101_83730203_83730276_83732958_83733042_83762653_83762751_83769200_83769412_83810064
ENSMUSG00000047747.11_83716973_83810702_1	chr8	+	1229	6	ISM	ENSMUSG00000047747.11	ENST00000306799.7	2272	7	126716	183	126716	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGACTTTGAGGATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	83716972	83810702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_83717101_83730203_83730276_83732958_83733042_83762653_83762751_83769200_83769412_83810064
ENSMUSG00000047747.11_83730204_83810886_1	chr8	+	1285	5	ISM	ENSMUSG00000047747.11	ENST00000306799.7	2272	7	139947	-1	139947	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCTGTCAGGGGCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	83730203	83810886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_83730276_83732958_83733042_83762653_83762751_83769200_83769412_83810064
ENSMUSG00000047777.10_152076142_152076760_1	chr4	-	329	2	ISM	ENSMUSG00000047777.10	ENSMUST00000055688.10	3205	4	3955	2052	3955	-2052	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTGTGCAAAGATCCG	NA	NA	NA	NA	NA	NA	NA	NA	152076760	152076141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152076237_152076526
ENSMUSG00000047777.10_152076924_152080366_1	chr4	-	312	3	ISM	ENSMUSG00000047777.10	ENSMUST00000055688.10	3205	4	349	2834	349	-2834	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTTCCCTCTTGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	152080366	152076923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_152077050_152078446_152078549_152080282
ENSMUSG00000047786.13_17623107_17679135_1	chr17	+	2429	6	FSM	ENSMUSG00000047786.13	ENSMUST00000115576.3	3116	6	173	514	173	-514	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATATGGCCCTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	17623106	17679135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_17623289_17647417_17647582_17663909_17664051_17666229_17666326_17674521_17674600_17677367
ENSMUSG00000047786.13_17647418_17679281_1	chr17	+	2393	5	ISM	ENSMUSG00000047786.13	ENSMUST00000115576.3	3116	6	24484	368	-21664	-368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTTTCTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	17647417	17679281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_17647582_17663909_17664051_17666229_17666326_17674521_17674600_17677367
ENSMUSG00000047786.13_17647456_17679345_1	chr17	+	2419	5	ISM	ENSMUSG00000047786.13	ENSMUST00000115576.3	3116	6	24522	304	-21626	-304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCACTCTGTAGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	17647455	17679345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_17647582_17663909_17664051_17666229_17666326_17674521_17674600_17677367
ENSMUSG00000047786.13_17647494_17679420_1	chr17	+	2456	5	ISM	ENSMUSG00000047786.13	ENSMUST00000115576.3	3116	6	24560	229	-21588	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGTGCGCCACCACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	17647493	17679420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_17647582_17663909_17664051_17666229_17666326_17674521_17674600_17677367
ENSMUSG00000047786.13_17663998_17679649_1	chr17	+	2509	4	ISM	ENSMUSG00000047786.13	ENSMUST00000115576.3	3116	6	41064	0	-5084	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGTCCATTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	17663997	17679649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_17664051_17666229_17666326_17674521_17674600_17677367
ENSMUSG00000047793.14_93163766_93210633_1	chr1	+	2878	21	ISM	ENSMUSG00000047793.14	ENST00000405547.7	4023	28	55	7175	55	-7175	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTTTTCTCAGTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	93163765	93210633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93163924_93183986_93184275_93186687_93186829_93187366_93187530_93189370_93189497_93189825_93189940_93192759_93192874_93193000_93193115_93198863_93198990_93199320_93199426_93199576_93199691_93200213_93200331_93201770_93201888_93202065_93202183_93202326_93202441_93203018_93203193_93208202_93208317_93208958_93209073_93209373_93209488_93209990_93210105_93210413
ENSMUSG00000047793.14_93163768_93210620_1	chr1	+	2863	21	ISM	ENSMUSG00000047793.14	ENST00000405547.7	4023	28	57	7188	57	-7188	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTACAATATCTCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	93163767	93210620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93163924_93183986_93184275_93186687_93186829_93187366_93187530_93189370_93189497_93189825_93189940_93192759_93192874_93193000_93193115_93198863_93198990_93199320_93199426_93199576_93199691_93200213_93200331_93201770_93201888_93202065_93202183_93202326_93202441_93203018_93203193_93208202_93208317_93208958_93209073_93209373_93209488_93209990_93210105_93210413
ENSMUSG00000047793.14_93163906_93210988_1	chr1	+	2880	22	ISM	ENSMUSG00000047793.14	ENST00000405547.7	4023	28	195	6820	195	-6820	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTCACAGGATCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	93163905	93210988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93163924_93183986_93184275_93186687_93186829_93187366_93187530_93189370_93189497_93189825_93189940_93192759_93192874_93193000_93193115_93198863_93198990_93199320_93199426_93199576_93199691_93200213_93200331_93201770_93201888_93202065_93202183_93202326_93202441_93203018_93203193_93208202_93208317_93208958_93209073_93209373_93209488_93209990_93210105_93210413_93210711_93210923
ENSMUSG00000047793.14_93184115_93211325_1	chr1	+	2882	22	ISM	ENSMUSG00000047793.14	ENST00000405547.7	4023	28	20404	6483	20404	-6483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGCTAACCACCCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	93184114	93211325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93184275_93186687_93186829_93187366_93187530_93189370_93189497_93189825_93189940_93192759_93192874_93193000_93193115_93198863_93198990_93199320_93199426_93199576_93199691_93200213_93200331_93201770_93201888_93202065_93202183_93202326_93202441_93203018_93203193_93208202_93208317_93208958_93209073_93209373_93209488_93209990_93210105_93210413_93210711_93210923_93211108_93211296
ENSMUSG00000047793.14_93184235_93212229_1	chr1	+	2969	23	ISM	ENSMUSG00000047793.14	ENST00000405547.7	4023	28	20524	5579	20524	-5579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTACCAAGAGCCGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	93184234	93212229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93184275_93186687_93186829_93187366_93187530_93189370_93189497_93189825_93189940_93192759_93192874_93193000_93193115_93198863_93198990_93199320_93199426_93199576_93199691_93200213_93200331_93201770_93201888_93202065_93202183_93202326_93202441_93203018_93203193_93208202_93208317_93208958_93209073_93209373_93209488_93209990_93210105_93210413_93210711_93210923_93211108_93211296_93211410_93212106
ENSMUSG00000047793.14_93187362_93212388_1	chr1	+	2952	21	ISM	ENSMUSG00000047793.14	ENST00000405547.7	4023	28	23651	5420	23651	-5420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTCCGGGACAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	93187361	93212388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93187530_93189370_93189497_93189825_93189940_93192759_93192874_93193000_93193115_93198863_93198990_93199320_93199426_93199576_93199691_93200213_93200331_93201770_93201888_93202065_93202183_93202326_93202441_93203018_93203193_93208202_93208317_93208958_93209073_93209373_93209488_93209990_93210105_93210413_93210711_93210923_93211108_93211296_93211410_93212106
ENSMUSG00000047793.14_93187468_93213584_1	chr1	+	2913	22	ISM	ENSMUSG00000047793.14	ENST00000405547.7	4023	28	23757	4224	23757	-4224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGCCCCTGTGCGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	93187467	93213584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93187530_93189370_93189497_93189825_93189940_93192759_93192874_93193000_93193115_93198863_93198990_93199320_93199426_93199576_93199691_93200213_93200331_93201770_93201888_93202065_93202183_93202326_93202441_93203018_93203193_93208202_93208317_93208958_93209073_93209373_93209488_93209990_93210105_93210413_93210711_93210923_93211108_93211296_93211410_93212106_93212389_93213517
ENSMUSG00000047793.14_93189459_93213782_1	chr1	+	2890	22	ISM	ENSMUSG00000047793.14	ENST00000405547.7	4023	28	25748	4026	25748	-4026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	797	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCCAGCAGAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	93189458	93213782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93189497_93189825_93189940_93192759_93192874_93193000_93193115_93198863_93198990_93199320_93199426_93199576_93199691_93200213_93200331_93201770_93201888_93202065_93202183_93202326_93202441_93203018_93203193_93208202_93208317_93208958_93209073_93209373_93209488_93209990_93210105_93210413_93210711_93210923_93211108_93211296_93211410_93212106_93212389_93213517_93213663_93213733
ENSMUSG00000047793.14_93189867_93217093_1	chr1	+	2909	22	ISM	ENSMUSG00000047793.14	ENST00000405547.7	4023	28	26156	715	26156	-715	internal_fragment	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCACAGCTGTGACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	93189866	93217093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93189940_93192759_93192874_93193000_93193115_93198863_93198990_93199320_93199426_93199576_93199691_93200213_93200331_93201770_93201888_93202065_93202183_93202326_93202441_93203018_93203193_93208202_93208317_93208958_93209073_93209373_93209488_93209990_93210105_93210413_93210711_93210923_93211108_93211296_93211410_93212106_93212389_93213517_93213663_93213733_93213817_93217029
ENSMUSG00000047793.14_93192759_93217808_1	chr1	+	2979	22	ISM	ENSMUSG00000047793.14	ENST00000405547.7	4023	28	29048	0	29048	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCAGTTCTGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	93192758	93217808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93192874_93193000_93193115_93198863_93198990_93199320_93199426_93199576_93199691_93200213_93200331_93201770_93201888_93202065_93202183_93202326_93202441_93203018_93203193_93208202_93208317_93208958_93209073_93209373_93209488_93209990_93210105_93210413_93210711_93210923_93211108_93211296_93211410_93212106_93212389_93213517_93213663_93213733_93213817_93217029_93217147_93217719
ENSMUSG00000047793.14_93192999_93217808_1	chr1	+	2866	21	ISM	ENSMUSG00000047793.14	ENST00000405547.7	4023	28	29288	0	29288	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCAGTTCTGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	93192998	93217808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93193115_93198863_93198990_93199320_93199426_93199576_93199691_93200213_93200331_93201770_93201888_93202065_93202183_93202326_93202441_93203018_93203193_93208202_93208317_93208958_93209073_93209373_93209488_93209990_93210105_93210413_93210711_93210923_93211108_93211296_93211410_93212106_93212389_93213517_93213663_93213733_93213817_93217029_93217147_93217719
ENSMUSG00000047804.16_61762133_61807044_1	chr11	-	3514	13	ISM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	14034	0	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTTTGTGCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	61807044	61762132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909
ENSMUSG00000047804.16_61762498_61821033_1	chr11	-	3464	15	FSM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	45	365	19	-365	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAACTTCCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	61821033	61762497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
ENSMUSG00000047810.10_6823968_6827924_1	chr19	-	1489	11	NNC	ENSMUSG00000047810.10	novel	1551	11	NA	NA	18	-38	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCCCCTGGGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	6827924	6823967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_6824138_6824786_6824812_6825003_6825103_6825307_6825448_6825549_6825737_6825908_6826053_6826342_6826600_6827051_6827193_6827269_6827366_6827623_6827742_6827812
ENSMUSG00000047810.10_6823968_6827924_10	chr19	-	1493	11	NNC	ENSMUSG00000047810.10	novel	1551	11	NA	NA	18	-38	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCCCCTGGGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	6827924	6823967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_6824138_6824786_6824812_6825003_6825103_6825301_6825448_6825549_6825737_6825908_6826053_6826344_6826600_6827051_6827193_6827269_6827366_6827623_6827742_6827812
ENSMUSG00000047810.10_6823968_6827924_11	chr19	-	1486	11	NNC	ENSMUSG00000047810.10	novel	1551	11	NA	NA	18	-38	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCCCCTGGGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	6827924	6823967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_6824138_6824786_6824812_6825003_6825103_6825301_6825448_6825549_6825737_6825908_6826053_6826342_6826591_6827051_6827193_6827269_6827366_6827623_6827742_6827812
ENSMUSG00000047810.10_6823968_6827924_2	chr19	-	1493	11	NNC	ENSMUSG00000047810.10	novel	1551	11	NA	NA	18	-38	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCCCCTGGGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	6827924	6823967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_6824138_6824786_6824812_6825003_6825103_6825301_6825448_6825549_6825737_6825908_6826053_6826342_6826600_6827053_6827193_6827269_6827366_6827623_6827742_6827812
ENSMUSG00000047810.10_6823968_6827924_4	chr19	-	1490	11	NNC	ENSMUSG00000047810.10	novel	1551	11	NA	NA	18	-38	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCCCCTGGGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	6827924	6823967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_6824138_6824786_6824812_6825003_6825103_6825301_6825448_6825554_6825737_6825908_6826053_6826342_6826600_6827051_6827193_6827269_6827366_6827623_6827742_6827812
ENSMUSG00000047810.10_6823968_6827924_6	chr19	-	1487	10	NNC	ENSMUSG00000047810.10	novel	1551	11	NA	NA	18	-38	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCCCCTGGGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	6827924	6823967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_6824155_6825003_6825103_6825301_6825448_6825549_6825737_6825908_6826053_6826342_6826600_6827051_6827193_6827269_6827366_6827623_6827742_6827812
ENSMUSG00000047810.10_6823968_6827924_7	chr19	-	1489	10	NNC	ENSMUSG00000047810.10	novel	1551	11	NA	NA	18	-38	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCCCCTGGGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	6827924	6823967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_6824157_6825003_6825103_6825301_6825448_6825549_6825737_6825908_6826053_6826342_6826600_6827051_6827193_6827269_6827366_6827623_6827742_6827812
ENSMUSG00000047810.10_6823968_6827924_8	chr19	-	1495	11	FSM	ENSMUSG00000047810.10	ENST00000359902.2	1551	11	18	38	18	-38	multi-exon	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCCCCTGGGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	6827924	6823967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6824138_6824786_6824812_6825003_6825103_6825301_6825448_6825549_6825737_6825908_6826053_6826342_6826600_6827051_6827193_6827269_6827366_6827623_6827742_6827812
ENSMUSG00000047810.10_6823968_6827924_9	chr19	-	1488	11	NNC	ENSMUSG00000047810.10	novel	1551	11	NA	NA	18	-38	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCCCCTGGGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	6827924	6823967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_6824138_6824786_6824812_6825003_6825103_6825301_6825448_6825549_6825737_6825908_6826046_6826342_6826600_6827051_6827193_6827269_6827366_6827623_6827742_6827812
ENSMUSG00000047821.17_62711079_62733458_1	chr11	+	3580	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	22	304	0	-304	multi-exon	TRUE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGACCTCTTCAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	62711078	62733458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
ENSMUSG00000047821.17_62711295_62733601_1	chr11	+	3507	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	238	161	0	-161	multi-exon	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAATAACAGTATACTTAT	NA	NA	NA	NA	NA	NA	NA	NA	62711294	62733601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
ENSMUSG00000047821.17_62711295_62733614_1	chr11	+	3520	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	238	148	0	-148	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTATGGAATTCAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	62711294	62733614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
ENSMUSG00000047821.17_62711414_62733762_1	chr11	+	3549	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	357	0	119	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTTGCTAGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	62711413	62733762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
ENSMUSG00000047821.17_62711479_62733762_1	chr11	+	3484	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	422	0	184	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTTGCTAGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	62711478	62733762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
ENSMUSG00000047832.10_112785112_112792685_1	chr12	-	838	2	FSM	ENSMUSG00000047832.10	ENSMUST00000062092.7	2425	2	324	1263	324	-1255	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGGCTTTGCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	112792685	112785111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_112785733_112792468
ENSMUSG00000047832.10_112785317_112792866_1	chr12	-	814	2	FSM	ENSMUSG00000047832.10	ENSMUST00000062092.7	2425	2	143	1468	143	-1460	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGCAGCCTCTGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	112792866	112785316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_112785733_112792468
ENSMUSG00000047832.10_112785381_112792994_1	chr12	-	878	2	FSM	ENSMUSG00000047832.10	ENSMUST00000062092.7	2425	2	15	1532	15	-1524	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCTTGCAAAACTCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	112792994	112785380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_112785733_112792468
ENSMUSG00000047832.10_112785491_112792999_1	chr12	-	316	2	FSM	ENSMUSG00000047832.10	ENSMUST00000220899.2	1994	2	44	1634	10	-1634	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAGAATGTAGATCGGG	NA	NA	NA	NA	NA	NA	NA	NA	112792999	112785490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_112785733_112792925
ENSMUSG00000047843.17_144192163_144201003_1	chr5	+	455	3	FSM	ENSMUSG00000047843.17	ENSMUST00000056578.7	955	3	119	381	119	-202	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGTACAATAGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	144192162	144201003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_144192330_144192619_144192723_144200818
ENSMUSG00000047843.17_144192219_144201051_1	chr5	+	447	3	FSM	ENSMUSG00000047843.17	ENSMUST00000056578.7	955	3	175	333	175	-154	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGCGGGCTAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	144192218	144201051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_144192330_144192619_144192723_144200818
ENSMUSG00000047866.21_87350838_87443259_1	chr8	+	2686	15	NNC	ENSMUSG00000047866.21	novel	2859	15	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATTCTGGTCTCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	87350837	87443259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363113_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
ENSMUSG00000047866.21_87350838_87443259_2	chr8	+	2693	15	FSM	ENSMUSG00000047866.21	ENSMUST00000034141.18	2859	15	166	0	27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATTCTGGTCTCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	87350837	87443259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
ENSMUSG00000047866.21_87350862_87368320_1	chr8	+	951	6	ISM	ENSMUSG00000047866.21	ENST00000535754.5	2429	14	51	74780	51	-74780	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGGCAAAACAAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	87350861	87368320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_87351045_87358013_87358249_87361424_87361548_87363106_87363271_87364530_87364626_87368169
ENSMUSG00000047866.21_87351003_87378837_1	chr8	+	952	7	ISM	ENSMUSG00000047866.21	ENST00000535754.5	2429	14	192	64263	192	-64263	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAATGGCTTGAAGACCGT	NA	NA	NA	NA	NA	NA	NA	NA	87351002	87378837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_87351045_87358013_87358249_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803
ENSMUSG00000047866.21_87358089_87392341_1	chr8	+	966	7	ISM	ENSMUSG00000047866.21	ENST00000535754.5	2429	14	7278	50759	7278	-50759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTCACAGATCACTATC	NA	NA	NA	NA	NA	NA	NA	NA	87358088	87392341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_87358249_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318
ENSMUSG00000047866.21_87358155_87392382_1	chr8	+	941	7	ISM	ENSMUSG00000047866.21	ENST00000535754.5	2429	14	7344	50718	7344	-50718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGTTCTTTTCATAGCA	NA	NA	NA	NA	NA	NA	NA	NA	87358154	87392382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_87358249_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318
ENSMUSG00000047866.21_87358207_87392435_1	chr8	+	942	7	ISM	ENSMUSG00000047866.21	ENST00000535754.5	2429	14	7396	50665	7396	-50665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTGGACAGGATGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	87358206	87392435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_87358249_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318
ENSMUSG00000047879.18_10001784_10024680_1	chr18	-	1007	11	ISM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	5461	8718	5387	-5755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTTCTTAAGGTTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	10024680	10001783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533
ENSMUSG00000047879.18_10004931_10030022_1	chr18	-	935	10	ISM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	119	11865	45	-8902	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGTGAAGTATCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	10030022	10004930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ENSMUSG00000047879.18_10004986_10030033_1	chr18	-	891	10	ISM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	108	11920	34	-8957	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGTCACCAAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	10030033	10004985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ENSMUSG00000047879.18_10005630_10030141_1	chr18	-	974	9	ISM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	0	12564	0	-9601	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCTTTTTGAGCCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	10030141	10005629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ENSMUSG00000047879.18_9995366_9997187_1	chr18	-	898	2	ISM	ENSMUSG00000047879.18	ENSMUST00000116669.2	2019	15	32880	-228	32880	228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTGCAAATGGCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	9997187	9995365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_9996249_9997172
ENSMUSG00000047879.18_9995415_9997253_1	chr18	-	915	2	ISM	ENSMUSG00000047879.18	ENSMUST00000116669.2	2019	15	32814	-179	32814	179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTATTAGAGCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	9997253	9995414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_9996249_9997172
ENSMUSG00000047879.18_9995594_10001813_1	chr18	-	993	5	ISM	ENSMUSG00000047879.18	ENSMUST00000116669.2	2019	15	28254	0	28254	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACACTTGATTATACACT	NA	NA	NA	NA	NA	NA	NA	NA	10001813	9995593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770
ENSMUSG00000047879.18_9995866_10004979_1	chr18	-	921	7	ISM	ENSMUSG00000047879.18	ENST00000400266.7	1673	15	25105	-163	25088	163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTTATCCCTTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	10004979	9995865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895
ENSMUSG00000047879.18_9996029_10016644_1	chr18	-	1250	12	ISM	ENSMUSG00000047879.18	ENST00000400266.7	1673	15	13440	0	13423	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGCTCTAAAGAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	10016644	9996028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540
ENSMUSG00000047879.18_9996210_10024680_1	chr18	-	1321	14	ISM	ENSMUSG00000047879.18	ENST00000400266.7	1673	15	5404	181	5387	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCCCAGAAGATATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	10024680	9996209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10024533
ENSMUSG00000047879.18_9997717_10030022_1	chr18	-	1283	13	ISM	ENSMUSG00000047879.18	ENST00000400266.7	1673	15	62	1688	45	-1688	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGATGTCTCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	10030022	9997716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10024533_10024680_10029912
ENSMUSG00000047881.15_64066240_64084568_1	chr5	-	2631	3	ISM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	41672	0	41672	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTCAGTCTGCTAATCT	NA	NA	NA	NA	NA	NA	NA	NA	64084568	64066239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_64068495_64082077_64082217_64084331
ENSMUSG00000047881.15_64066408_64093437_1	chr5	-	2593	5	ISM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	32803	168	32803	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGCGACATCTTACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	64093437	64066407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365
ENSMUSG00000047881.15_64066516_64095222_1	chr5	-	2559	6	ISM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	31018	276	31018	-276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTCCAGTGTCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	64095222	64066515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148
ENSMUSG00000047881.15_64066567_64095272_1	chr5	-	2558	6	ISM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	30968	327	30968	-327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACTCGGTTGCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	64095272	64066566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148
ENSMUSG00000047881.15_64066646_64095335_1	chr5	-	2542	6	ISM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	30905	406	30905	-406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAGAAGTTCTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	64095335	64066645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148
ENSMUSG00000047881.15_64066811_64126166_1	chr5	-	2596	7	FSM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	74	571	74	-571	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTCTAATACTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	64126166	64066810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
ENSMUSG00000047881.15_64066882_64126186_1	chr5	-	2545	7	FSM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	54	642	54	-642	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAACAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	64126186	64066881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
ENSMUSG00000047907.12_169728325_169912566_1	chr2	+	561	2	FSM	ENSMUSG00000047907.12	ENST00000603338.2	3443	2	2882	0	2882	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTGTCGCAGTCCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	169728324	169912566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_169728507_169912187
ENSMUSG00000047921.18_72461469_72835538_1	chr15	-	2336	14	NNC	ENSMUSG00000047921.18	novel	3301	22	NA	NA	92121	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTGATTTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	72835538	72461468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_72462012_72462464_72462689_72557131_72557229_72565352_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408
ENSMUSG00000047921.18_72629090_72929920_1	chr15	-	2213	16	ISM	ENSMUSG00000047921.18	ENSMUST00000089770.11	4048	22	3133	167621	-2261	42283	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCAGCACACTTCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	72929920	72629089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770
ENSMUSG00000047921.18_72797374_72930174_1	chr15	-	2205	14	ISM	ENSMUSG00000047921.18	ENSMUST00000089770.11	4048	22	2879	335905	-2515	68282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGACCTGAGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	72930174	72797373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770
ENSMUSG00000047921.18_72797429_72930239_1	chr15	-	2215	14	ISM	ENSMUSG00000047921.18	ENSMUST00000089770.11	4048	22	2814	335960	-2580	68227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTCACCATCAACATCA	NA	NA	NA	NA	NA	NA	NA	NA	72930239	72797428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770
ENSMUSG00000047921.18_72813741_72932961_1	chr15	-	2216	13	ISM	ENSMUSG00000047921.18	ENSMUST00000089770.11	4048	22	92	352272	-62	51915	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGACTGCAGATCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	72932961	72813740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ENSMUSG00000047945.7_129407476_129409779_1	chr4	+	1501	2	NNC	ENSMUSG00000047945.7	novel	1605	2	NA	NA	102	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTGGTCTTCTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	129407475	129409779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_129407710_129408512
ENSMUSG00000047945.7_129407476_129409779_2	chr4	+	1504	2	FSM	ENSMUSG00000047945.7	ENSMUST00000062356.7	1605	2	102	-1	102	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTGGTCTTCTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	129407475	129409779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129407710_129408509
ENSMUSG00000047963.8_92751052_92753134_1	chr5	+	539	2	FSM	ENSMUSG00000047963.8	ENSMUST00000050952.4	1985	2	142	1304	142	456	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGGTTAAGTCTAAATC	NA	NA	NA	NA	NA	NA	NA	NA	92751051	92753134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_92751197_92752740
ENSMUSG00000048000.16_87254770_87282820_1	chr1	+	404	4	FSM	ENSMUSG00000048000.16	ENST00000490612.5	506	4	18	84	18	-69	multi-exon	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGTGGCGTGAATAATG	NA	NA	NA	NA	NA	NA	NA	NA	87254769	87282820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_87254815_87261991_87262057_87282042_87282209_87282692
ENSMUSG00000048000.16_87254770_87282820_2	chr1	+	421	5	FSM	ENSMUSG00000048000.16	ENST00000464402.5	508	5	18	69	18	-69	multi-exon	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGTGGCGTGAATAATG	NA	NA	NA	NA	NA	NA	NA	NA	87254769	87282820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_87254815_87261991_87262057_87268879_87268990_87282125_87282209_87282702
ENSMUSG00000048000.16_87254770_87282891_1	chr1	+	382	4	FSM	ENSMUSG00000048000.16	ENST00000492910.5	649	4	19	248	18	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGTACCTAAACCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	87254769	87282891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282702
ENSMUSG00000048004.16_119978508_119982441_1	chr12	+	501	3	NNC	ENSMUSG00000048004.16	novel	514	3	NA	NA	25	10	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTCACTCACCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	119978507	119982441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_119978738_119979867_119979942_119982244
ENSMUSG00000048004.16_119978508_119982441_2	chr12	+	493	3	NNC	ENSMUSG00000048004.16	novel	514	3	NA	NA	25	10	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTCACTCACCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	119978507	119982441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_119978738_119979875_119979942_119982244
ENSMUSG00000048007.5_133438320_133442439_1	chrX	-	931	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	175	315	175	-315	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGTGACTTACTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	133442439	133438319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_133439017_133442205
ENSMUSG00000048007.5_133438320_133442614_1	chrX	-	1106	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	0	315	0	-315	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGTGACTTACTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	133442614	133438319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_133439017_133442205
ENSMUSG00000048027.10_16024928_16046434_1	chr17	-	2996	4	FSM	ENSMUSG00000048027.10	ENST00000513185.3	3255	4	259	0	259	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGATGTTTGTTCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	16046434	16024927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_16026098_16026911_16028064_16040927_16041441_16046273
ENSMUSG00000048027.10_16026088_16041260_1	chr17	-	2305	2	ISM	ENSMUSG00000048027.10	ENSMUST00000170578.3	5698	3	5588	2638	5433	-1160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTGTTTTAATATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	16041260	16026087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_16028064_16040931
ENSMUSG00000048027.10_16026154_16041343_1	chr17	-	2322	2	ISM	ENSMUSG00000048027.10	ENSMUST00000170578.3	5698	3	5505	2704	5350	-1226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCCTGAATAGGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	16041343	16026153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_16028064_16040931
ENSMUSG00000048027.10_16026301_16046333_1	chr17	-	2332	3	FSM	ENSMUSG00000048027.10	ENSMUST00000170578.3	5698	3	515	2851	360	-1373	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTCCCCAAGTCATCGC	NA	NA	NA	NA	NA	NA	NA	NA	16046333	16026300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_16028064_16040931_16041441_16046273
ENSMUSG00000048027.10_16026564_16046565_1	chr17	-	2301	3	FSM	ENSMUSG00000048027.10	ENSMUST00000170578.3	5698	3	283	3114	128	-1636	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCATGCTTTGCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	16046565	16026563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_16028064_16040931_16041441_16046273
ENSMUSG00000048027.10_16026715_16046822_1	chr17	-	2407	3	FSM	ENSMUSG00000048027.10	ENSMUST00000170578.3	5698	3	26	3265	0	-1787	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATGTACCAGTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	16046822	16026714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_16028064_16040931_16041441_16046273
ENSMUSG00000048029.11_58931857_58957610_1	chr19	+	787	6	NNC	ENSMUSG00000048029.11	novel	813	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGTATGGGGTATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	58931856	58957610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_58932054_58947437_58947495_58948554_58948723_58952809_58953006_58956938_58957002_58957504
ENSMUSG00000048029.11_58931857_58957610_2	chr19	+	792	6	FSM	ENSMUSG00000048029.11	ENST00000409522.5	813	6	21	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGTATGGGGTATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	58931856	58957610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_58932054_58947437_58947495_58948554_58948723_58952809_58953006_58956933_58957002_58957504
ENSMUSG00000048039.9_87837721_87839369_1	chr3	+	930	2	ISM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	100	8624	100	-7477	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTGGCAATAGACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	87837720	87839369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87837919_87838637
ENSMUSG00000048039.9_87837765_87839442_1	chr3	+	959	2	ISM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	144	8551	144	-7404	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTAAATTACAATGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	87837764	87839442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87837919_87838637
ENSMUSG00000048039.9_87838652_87845910_1	chr3	+	961	2	ISM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	1031	2083	25	-936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGGCATGCCATTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	87838651	87845910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87839583_87845880
ENSMUSG00000048039.9_87838659_87839469_1	chr3	+	751	2	NNC	ENSMUSG00000048039.9	novel	2893	4	NA	NA	32	-7377	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATGAGTACGTCCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	87838658	87839469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_87839285_87839344
ENSMUSG00000048039.9_87838712_87839525_1	chr3	+	754	2	NNC	ENSMUSG00000048039.9	novel	2893	4	NA	NA	85	-7321	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATCCGGAAGTGCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	87838711	87839525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_87839285_87839344
ENSMUSG00000048039.9_87838756_87839582_1	chr3	+	767	2	NNC	ENSMUSG00000048039.9	novel	2893	4	NA	NA	129	-7264	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGAGCGTGGGTCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	87838755	87839582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_87839285_87839344
ENSMUSG00000048039.9_87838772_87846040_1	chr3	+	971	2	ISM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	1151	1953	145	-806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGCATCTCACCAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	87838771	87846040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87839583_87845880
ENSMUSG00000048039.9_87838805_87845918_1	chr3	+	751	3	ISM	ENSMUSG00000048039.9	ENST00000313146.10	1394	4	178	928	178	-928	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCATTCACAATGACTACA	NA	NA	NA	NA	NA	NA	NA	NA	87838804	87845918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87839282_87839346_87839583_87845880
ENSMUSG00000048039.9_87838840_87845991_1	chr3	+	789	3	ISM	ENSMUSG00000048039.9	ENST00000313146.10	1394	4	213	855	213	-855	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTCCTCAACCGGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	87838839	87845991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87839282_87839346_87839583_87845880
ENSMUSG00000048039.9_87838924_87846036_1	chr3	+	750	3	ISM	ENSMUSG00000048039.9	ENST00000313146.10	1394	4	297	810	297	-810	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGAAGCATCTCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	87838923	87846036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87839282_87839346_87839583_87845880
ENSMUSG00000048039.9_87839025_87846611_1	chr3	+	761	4	FSM	ENSMUSG00000048039.9	ENST00000313146.10	1394	4	398	235	398	-235	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTGAATGGGAACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	87839024	87846611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_87839282_87839346_87839583_87845880_87846082_87846544
ENSMUSG00000048039.9_87839091_87846677_1	chr3	+	761	4	FSM	ENSMUSG00000048039.9	ENST00000313146.10	1394	4	464	169	464	-169	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTAGACCAACCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	87839090	87846677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_87839282_87839346_87839583_87845880_87846082_87846544
ENSMUSG00000048039.9_87839156_87846731_1	chr3	+	750	4	FSM	ENSMUSG00000048039.9	ENST00000313146.10	1394	4	529	115	529	-115	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGAGAGGGGCTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	87839155	87846731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_87839282_87839346_87839583_87845880_87846082_87846544
ENSMUSG00000048039.9_87839197_87846768_1	chr3	+	745	4	NNC	ENSMUSG00000048039.9	novel	1394	4	NA	NA	570	-78	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTTCATCTCAGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	87839196	87846768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_87839281_87839346_87839583_87845880_87846082_87846544
ENSMUSG00000048039.9_87845924_87847346_1	chr3	+	960	2	ISM	ENSMUSG00000048039.9	ENST00000313146.10	1394	4	7297	-500	7297	500	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTGTTCACCACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	87845923	87847346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87846082_87846544
ENSMUSG00000048039.9_87845990_87847386_1	chr3	+	934	2	ISM	ENSMUSG00000048039.9	ENST00000313146.10	1394	4	7363	-540	7363	540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTTGGTTTTTCGA	NA	NA	NA	NA	NA	NA	NA	NA	87845989	87847386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87846082_87846544
ENSMUSG00000048058.18_101783175_101785246_1	chr2	-	419	2	ISM	ENSMUSG00000048058.18	ENST00000528989.5	1146	5	231519	52	231484	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAATTTTGGGGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	101785246	101783174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_101783521_101785173
ENSMUSG00000048058.18_101783495_101888307_1	chr2	-	428	3	ISM	ENSMUSG00000048058.18	ENST00000528989.5	1146	5	128458	372	128423	-372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTATTCATCTGACACC	NA	NA	NA	NA	NA	NA	NA	NA	101888307	101783494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_101783521_101785173_101785520_101888251
ENSMUSG00000048058.18_101785174_101888386_1	chr2	-	481	2	ISM	ENSMUSG00000048058.18	ENST00000528989.5	1146	5	128379	2051	128344	-2051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGACTGTGGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	101888386	101785173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_101785520_101888251
ENSMUSG00000048058.18_101785222_101944000_1	chr2	-	682	4	ISM	ENSMUSG00000048058.18	ENSMUST00000058790.12	3833	6	72730	4674	72730	-2099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTAGGCTCTCCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	101944000	101785221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_101785520_101888251_101888387_101900277_101900404_101943877
ENSMUSG00000048058.18_101785298_101900403_1	chr2	-	483	3	ISM	ENSMUSG00000048058.18	ENST00000528989.5	1146	5	116362	2175	116327	-2175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACCACTGCAACGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	101900403	101785297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_101785520_101888251_101888387_101900277
ENSMUSG00000048058.18_101785456_102016703_1	chr2	-	404	4	ISM	ENSMUSG00000048058.18	ENST00000528989.5	1146	5	62	2333	27	-2333	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGCCATCATCGGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	102016703	101785455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_101785520_101888251_101888387_101900277_101900404_102016624
ENSMUSG00000048076.15_59102238_59103773_1	chr11	-	1411	2	ISM	ENSMUSG00000048076.15	ENST00000541182.1	1814	5	14785	-1	14785	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGCTTGTGTGTCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	59103773	59102237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59103522_59103646
ENSMUSG00000048076.15_59102238_59104079_1	chr11	-	1520	3	ISM	ENSMUSG00000048076.15	ENST00000541182.1	1814	5	14479	-1	14479	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGCTTGTGTGTCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	59104079	59102237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59103522_59103646_59103772_59103968
ENSMUSG00000048076.15_59102504_59104349_1	chr11	-	1438	4	ISM	ENSMUSG00000048076.15	ENST00000541182.1	1814	5	14209	265	14209	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTCCCTCAGCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	59104349	59102503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165
ENSMUSG00000048076.15_59102528_59118529_1	chr11	-	1496	5	FSM	ENSMUSG00000048076.15	ENST00000541182.1	1814	5	29	289	29	-288	multi-exon	FALSE	canonical	NA	NA	NA	NA	3265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCATCTCCATGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	59118529	59102527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118447
ENSMUSG00000048076.15_59102648_59119096_1	chr11	-	1392	5	FSM	ENSMUSG00000048076.15	ENSMUST00000061242.8	1800	5	0	408	0	-408	multi-exon	FALSE	canonical	NA	NA	NA	NA	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCATACCCAGCCTACTC	NA	NA	NA	NA	NA	NA	NA	NA	59119096	59102647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
ENSMUSG00000048109.11_107233253_107238141_1	chr3	-	1081	3	FSM	ENSMUSG00000048109.11	ENST00000369784.9	3341	3	2264	-4	2239	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTGGAAGTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	107238141	107233252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_107233621_107234291_107234394_107237530
ENSMUSG00000048109.11_107233305_107238470_1	chr3	-	1169	2	FSM	ENSMUSG00000048109.11	ENST00000650953.2	3083	2	1910	4	1910	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTTTTGTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	107238470	107233304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_107233621_107237617
ENSMUSG00000048109.11_107234292_107238470_1	chr3	-	1042	2	ISM	ENSMUSG00000048109.11	ENST00000369784.9	3341	3	1935	1035	1910	-991	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTACAGTACGTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	107238470	107234291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_107234394_107237530
ENSMUSG00000048126.17_90735186_90743876_1	chr1	-	2593	5	ISM	ENSMUSG00000048126.17	ENST00000392003.6	3086	6	14105	-5	14105	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGAGGTGGGGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	90743876	90735185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_90735799_90737847_90738451_90738980_90739554_90740936_90741537_90743672
ENSMUSG00000048126.17_90735186_90743978_1	chr1	-	2695	5	ISM	ENSMUSG00000048126.17	ENST00000392003.6	3086	6	14003	-5	14003	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGAGGTGGGGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	90743978	90735185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_90735799_90737847_90738451_90738980_90739554_90740936_90741537_90743672
ENSMUSG00000048126.17_90735351_90744093_1	chr1	-	2645	5	ISM	ENSMUSG00000048126.17	ENST00000392003.6	3086	6	13888	160	13888	-160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTGGTGAAGATCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	90744093	90735350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_90735799_90737847_90738451_90738980_90739554_90740936_90741537_90743672
ENSMUSG00000048126.17_90735547_90757888_1	chr1	-	2637	6	FSM	ENSMUSG00000048126.17	ENST00000392003.6	3086	6	93	356	93	-356	multi-exon	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCGGAAATGCCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	90757888	90735546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_90735799_90737847_90738451_90738980_90739554_90740936_90741537_90743672_90744258_90757864
ENSMUSG00000048126.17_90735610_90757927_1	chr1	-	2613	6	FSM	ENSMUSG00000048126.17	ENST00000392003.6	3086	6	54	419	54	-419	multi-exon	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCAAGGATGAAGTACAG	NA	NA	NA	NA	NA	NA	NA	NA	90757927	90735609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_90735799_90737847_90738451_90738980_90739554_90740936_90741537_90743672_90744258_90757864
ENSMUSG00000048126.17_90735671_90757969_1	chr1	-	2594	6	FSM	ENSMUSG00000048126.17	ENST00000392003.6	3086	6	12	480	12	-480	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTAGCCGTCATCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	90757969	90735670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_90735799_90737847_90738451_90738980_90739554_90740936_90741537_90743672_90744258_90757864
ENSMUSG00000048138.11_25649775_25655245_1	chr19	+	1227	4	FSM	ENSMUSG00000048138.11	ENSMUST00000053068.7	2337	4	0	1110	0	-1110	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTACAAAGGTACCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	25649774	25655245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_25650123_25650779_25651341_25652914_25653018_25655030
ENSMUSG00000048138.11_25649984_25655402_1	chr19	+	1175	4	FSM	ENSMUSG00000048138.11	ENSMUST00000053068.7	2337	4	209	953	209	-953	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCCCTGTCCTCACGA	NA	NA	NA	NA	NA	NA	NA	NA	25649983	25655402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_25650123_25650779_25651341_25652914_25653018_25655030
ENSMUSG00000048138.11_25650963_25655717_1	chr19	+	1168	3	ISM	ENSMUSG00000048138.11	ENSMUST00000053068.7	2337	4	1188	638	1188	-638	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGATATGGACTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	25650962	25655717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_25651341_25652914_25653018_25655030
ENSMUSG00000048138.11_25651188_25655944_1	chr19	+	1170	3	ISM	ENSMUSG00000048138.11	ENSMUST00000053068.7	2337	4	1413	411	1413	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTACAATAGACAGATG	NA	NA	NA	NA	NA	NA	NA	NA	25651187	25655944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_25651341_25652914_25653018_25655030
ENSMUSG00000048138.11_25651230_25656017_1	chr19	+	1201	3	ISM	ENSMUSG00000048138.11	ENSMUST00000053068.7	2337	4	1455	338	1455	-338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACTGTCGTTCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	25651229	25656017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_25651341_25652914_25653018_25655030
ENSMUSG00000048138.11_25652949_25656153_1	chr19	+	1192	2	ISM	ENSMUSG00000048138.11	ENSMUST00000053068.7	2337	4	3174	202	3174	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGTTAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	25652948	25656153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_25653018_25655030
ENSMUSG00000048170.15_128308838_128311551_1	chr7	-	222	3	ISM	ENSMUSG00000048170.15	ENSMUST00000119081.2	2347	17	30659	9347	30659	-9347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGCCCGCAGAACAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	128311551	128308837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_128308890_128310805_128310930_128311505
ENSMUSG00000048175.14_98033260_98039197_1	chr15	-	1093	2	ISM	ENSMUSG00000048175.14	ENSMUST00000059112.12	1049	4	4343	-335	4343	335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGCTCCAAGGATGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	98039197	98033259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98034320_98039164
ENSMUSG00000048175.14_98033313_98039246_1	chr15	-	1089	2	ISM	ENSMUSG00000048175.14	ENSMUST00000059112.12	1049	4	4294	-282	4294	282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTTCTAGTTGATATG	NA	NA	NA	NA	NA	NA	NA	NA	98039246	98033312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98034320_98039164
ENSMUSG00000048175.14_98033394_98039270_1	chr15	-	1032	2	ISM	ENSMUSG00000048175.14	ENSMUST00000059112.12	1049	4	4270	-201	4270	201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCTAGGAAGATGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	98039270	98033393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98034320_98039164
ENSMUSG00000048175.14_98033595_98063441_1	chr15	-	1084	4	FSM	ENSMUSG00000048175.14	ENSMUST00000143400.8	2226	4	65	1077	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGCTGTGTGGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	98063441	98033594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98034320_98039164_98039270_98040531_98040696_98063351
ENSMUSG00000048175.14_98034113_98043540_1	chr15	-	566	4	FSM	ENSMUSG00000048175.14	ENST00000535055.5	568	4	2	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACAACAACGATACGCC	NA	NA	NA	NA	NA	NA	NA	NA	98043540	98034112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98034337_98039146_98039270_98040531_98040692_98043481
ENSMUSG00000048175.14_98034113_98043540_2	chr15	-	561	4	NNC	ENSMUSG00000048175.14	novel	568	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACAACAACGATACGCC	NA	NA	NA	NA	NA	NA	NA	NA	98043540	98034112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_98034337_98039146_98039270_98040531_98040692_98043486
ENSMUSG00000048175.14_98034113_98043540_3	chr15	-	559	4	NNC	ENSMUSG00000048175.14	novel	568	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACAACAACGATACGCC	NA	NA	NA	NA	NA	NA	NA	NA	98043540	98034112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_98034337_98039146_98039270_98040531_98040685_98043481
ENSMUSG00000048175.14_98034113_98043540_4	chr15	-	559	4	NNC	ENSMUSG00000048175.14	novel	568	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACAACAACGATACGCC	NA	NA	NA	NA	NA	NA	NA	NA	98043540	98034112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_98034337_98039146_98039263_98040531_98040692_98043481
ENSMUSG00000048186.15_4749074_4768114_1	chr2	+	916	4	ISM	ENSMUSG00000048186.15	ENST00000378605.3	1132	6	45	33280	45	-25630	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTCTGCGTCGTTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	4749073	4768114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_4749369_4754346_4754470_4757530_4757803_4767888
ENSMUSG00000048186.15_4749254_4801394_1	chr2	+	907	6	FSM	ENSMUSG00000048186.15	ENST00000378605.3	1132	6	225	0	225	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAACACATTTACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	4749253	4801394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_4749369_4754346_4754470_4757530_4757803_4767888_4768115_4793266_4793387_4801343
ENSMUSG00000048222.4_121292026_121295302_1	chr2	-	893	3	ISM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	9246	1310	9246	-1310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTAGGGACCTATGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	121295302	121292025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121292786_121292867_121292958_121295259
ENSMUSG00000048222.4_121297275_121304548_1	chr2	-	984	4	ISM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	0	6559	0	-6559	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATGGAAAGTCCGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	121304548	121297274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121297378_121297468_121297578_121300259_121300798_121304314
ENSMUSG00000048277.16_117700538_117705109_1	chr11	+	1467	4	NNC	ENSMUSG00000048277.16	novel	1520	4	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGCTGGGTGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	117700537	117705109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_117700621_117703284_117703523_117703871_117704012_117704103
ENSMUSG00000048279.20_61410800_61429530_1	chr14	+	1427	5	ISM	ENSMUSG00000048279.20	ENST00000402364.1	14888	7	55	23419	55	-3582	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACAAACTTTGGCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	61410799	61429530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_61410898_61418393_61418480_61421400_61421513_61427050_61427198_61428546
ENSMUSG00000048279.20_61421419_61429768_1	chr14	+	1463	3	ISM	ENSMUSG00000048279.20	ENSMUST00000121091.2	4581	8	10980	3344	10674	-3344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTCAGCTCAGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	61421418	61429768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_61421513_61427050_61427198_61428546
ENSMUSG00000048279.20_61429582_61441006_1	chr14	+	1412	3	ISM	ENSMUSG00000048279.20	ENST00000402364.1	14888	7	18837	11943	18837	4009	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTGAGAATCTATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	61429581	61441006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_61430042_61430836_61430929_61440146
ENSMUSG00000048279.20_61429845_61441277_1	chr14	+	1420	3	ISM	ENSMUSG00000048279.20	ENST00000402364.1	14888	7	19100	11672	19100	4280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAAGAAAAATTGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	61429844	61441277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_61430042_61430836_61430929_61440146
ENSMUSG00000048279.20_61429907_61441339_1	chr14	+	1420	3	ISM	ENSMUSG00000048279.20	ENST00000402364.1	14888	7	19162	11610	19162	4342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCCAAAACACTCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	61429906	61441339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_61430042_61430836_61430929_61440146
ENSMUSG00000048279.20_61430922_61441510_1	chr14	+	1371	2	ISM	ENSMUSG00000048279.20	ENST00000402364.1	14888	7	20177	11439	20177	4513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATATGTGTGATGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	61430921	61441510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_61430929_61440146
ENSMUSG00000048285.10_70919265_70947097_1	chr12	+	2425	12	ISM	ENSMUSG00000048285.10	ENSMUST00000057859.9	4662	14	46977	1911	8603	-1911	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGAAGCTCTGGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	70919264	70947097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_70919356_70923933_70924038_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ENSMUSG00000048285.10_70923934_70947234_1	chr12	+	2471	11	ISM	ENSMUSG00000048285.10	ENSMUST00000057859.9	4662	14	51646	1774	13272	-1774	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCCAACAGATGGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	70923933	70947234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_70924038_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ENSMUSG00000048285.10_70930483_70947616_1	chr12	+	2442	8	ISM	ENSMUSG00000048285.10	ENST00000395718.6	4567	13	19821	1392	19821	-1392	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCACAGTAGGATTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	70930482	70947616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ENSMUSG00000048285.10_70936705_70947883_1	chr12	+	2462	5	ISM	ENSMUSG00000048285.10	ENST00000395718.6	4567	13	26043	1125	26043	-1125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATACTCCATTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	70936704	70947883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ENSMUSG00000048285.10_70940406_70948085_1	chr12	+	2463	4	ISM	ENSMUSG00000048285.10	ENST00000395718.6	4567	13	29744	923	29744	-923	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCATGCTGCCCTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	70940405	70948085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_70940717_70941650_70941783_70944115_70944208_70946157
ENSMUSG00000048285.10_70941597_70948410_1	chr12	+	2531	3	ISM	ENSMUSG00000048285.10	ENST00000395718.6	4567	13	30935	598	30935	-598	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCTCGGCATCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	70941596	70948410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_70941783_70944115_70944208_70946157
ENSMUSG00000048285.10_70941732_70948459_1	chr12	+	2445	3	ISM	ENSMUSG00000048285.10	ENST00000395718.6	4567	13	31070	549	31070	-549	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTGCTTTATACCT	NA	NA	NA	NA	NA	NA	NA	NA	70941731	70948459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_70941783_70944115_70944208_70946157
ENSMUSG00000048307.9_36478317_36484186_1	chr15	-	1363	2	ISM	ENSMUSG00000048307.9	ENSMUST00000057486.9	2509	5	12780	503	2078	-503	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCATGGAGGTTTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	36484186	36478316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36479620_36484126
ENSMUSG00000048307.9_36478371_36484235_1	chr15	-	1358	2	ISM	ENSMUSG00000048307.9	ENSMUST00000057486.9	2509	5	12731	557	2029	-557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAAAGCCCTCTTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	36484235	36478370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36479620_36484126
ENSMUSG00000048307.9_36478520_36486094_1	chr15	-	1413	3	ISM	ENSMUSG00000048307.9	ENSMUST00000057486.9	2509	5	10872	706	170	-706	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGTTCAGCAGTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	36486094	36478519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36479620_36484126_36484286_36485940
ENSMUSG00000048307.9_36478804_36496094_1	chr15	-	1380	4	ISM	ENSMUSG00000048307.9	ENSMUST00000057486.9	2509	5	872	990	872	579	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTTTGAATCAGTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	36496094	36478803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_36479620_36484126_36484286_36485940_36486274_36496022
ENSMUSG00000048307.9_36478905_36496935_1	chr15	-	1387	5	FSM	ENSMUSG00000048307.9	ENSMUST00000057486.9	2509	5	31	1091	31	478	multi-exon	FALSE	canonical	NA	NA	NA	NA	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGACTTTAAAAGTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	36496935	36478904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_36479620_36484126_36484286_36485940_36486274_36496022_36496140_36496872
ENSMUSG00000048307.9_36479383_36486205_1	chr15	-	502	2	FSM	ENSMUSG00000048307.9	ENST00000519316.5	561	2	59	0	59	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCTGTCAGTGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	36486205	36479382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_36479620_36485940
ENSMUSG00000048310.9_106627073_106658235_1	chr8	+	3080	3	FSM	ENSMUSG00000048310.9	ENSMUST00000049699.9	3255	3	0	175	0	-175	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGCCCAAAGTAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	106627072	106658235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_106627173_106639251_106640279_106656282
ENSMUSG00000048327.7_129110938_129117462_1	chr2	-	547	4	ISM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	21670	808	21670	-808	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGTTTTTTTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	129117462	129110937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_129111184_129112494_129112682_129114416_129114478_129117409
ENSMUSG00000048327.7_129111104_129123901_1	chr2	-	574	5	ISM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	15231	974	15231	-974	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGCTACCCAGAAATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	129123901	129111103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_129111184_129112494_129112682_129114416_129114478_129117409_129117566_129123811
ENSMUSG00000048327.7_129111167_129123951_1	chr2	-	561	5	ISM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	15181	1037	15181	-1037	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCAAGACATGAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	129123951	129111166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_129111184_129112494_129112682_129114416_129114478_129117409_129117566_129123811
ENSMUSG00000048327.7_129112616_129126849_1	chr2	-	564	5	ISM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	12283	2486	12283	-2486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGCAGCCTTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	129126849	129112615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_129112682_129114416_129114478_129117409_129117566_129123811_129124020_129126776
ENSMUSG00000048327.7_129117548_129127113_1	chr2	-	563	3	ISM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	12019	7418	12019	-7418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCACCATAGTATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	129127113	129117547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_129117566_129123811_129124020_129126776
ENSMUSG00000048327.7_129123956_129127266_1	chr2	-	554	2	ISM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	11866	13826	11866	-13826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAAAGAAAAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	129127266	129123955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_129124020_129126776
ENSMUSG00000048330.15_108637649_108656025_1	chr7	-	517	2	ISM	ENSMUSG00000048330.15	ENST00000425599.6	864	4	26468	-2	26468	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCCTGCTTGGGAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	108656025	108637648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_108638091_108655950
ENSMUSG00000048330.15_108637819_108657045_1	chr7	-	401	3	ISM	ENSMUSG00000048330.15	ENST00000425599.6	864	4	25448	168	25448	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGGCAGAGAATGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	108657045	108637818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_108638091_108655950_108656024_108656989
ENSMUSG00000048330.15_108638008_108682512_1	chr7	-	526	4	FSM	ENSMUSG00000048330.15	ENST00000425599.6	864	4	-19	357	17	-357	multi-exon	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAAAAGAGCCCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	108682512	108638007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_108638091_108655950_108656024_108656989_108657217_108682369
ENSMUSG00000048332.14_52949004_53168441_1	chr3	+	1394	4	FSM	ENSMUSG00000048332.14	ENSMUST00000059562.14	2108	4	55	659	0	-659	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGACATTCCCTGTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	52949003	53168441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_52949196_52950539_52951113_53139150_53139250_53167911
ENSMUSG00000048332.14_52949004_53168514_1	chr3	+	1467	4	FSM	ENSMUSG00000048332.14	ENSMUST00000059562.14	2108	4	55	586	0	-586	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACATACCACATGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	52949003	53168514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_52949196_52950539_52951113_53139150_53139250_53167911
ENSMUSG00000048332.14_52949004_53168956_1	chr3	+	1788	4	FSM	ENSMUSG00000048332.14	ENSMUST00000147139.2	1932	4	0	144	0	-144	multi-exon	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGTTGGATCTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	52949003	53168956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_52949102_52950566_52951113_53139150_53139250_53167911
ENSMUSG00000048332.14_52949136_53168564_1	chr3	+	1385	4	FSM	ENSMUSG00000048332.14	ENSMUST00000059562.14	2108	4	187	536	132	-536	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCATACATCACACGCAC	NA	NA	NA	NA	NA	NA	NA	NA	52949135	53168564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_52949196_52950539_52951113_53139150_53139250_53167911
ENSMUSG00000048332.14_52950994_53169100_1	chr3	+	1407	3	ISM	ENSMUSG00000048332.14	ENSMUST00000147139.2	1932	4	1990	0	1990	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTGAGTCACCGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	52950993	53169100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_52951113_53139150_53139250_53167911
ENSMUSG00000048351.15_108185337_108196491_1	chr4	+	1464	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	0	2250	0	-2250	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAACAGACCCTTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	108185336	108196491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_108185488_108189407_108189549_108195319
ENSMUSG00000048368.10_49736242_49745938_1	chr13	+	1409	3	FSM	ENSMUSG00000048368.10	ENSMUST00000065494.8	1556	3	0	147	0	-147	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATGTGTTAGTATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	49736241	49745938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_49736290_49742937_49743892_49745531
ENSMUSG00000048376.7_95739521_95754891_2	chr13	-	2022	2	FSM	ENSMUSG00000048376.7	ENSMUST00000059193.7	3336	2	104	1210	104	-1210	multi-exon	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCTAGACACAGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	95754891	95739520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_95741446_95754794
ENSMUSG00000048400.14_96285920_96291106_1	chr8	-	660	2	ISM	ENSMUSG00000048400.14	ENSMUST00000180075.2	1152	5	10719	0	10719	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGAGCTAACCTACTACC	NA	NA	NA	NA	NA	NA	NA	NA	96291106	96285919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_96286451_96290977
ENSMUSG00000048400.14_96286153_96292344_1	chr8	-	686	3	ISM	ENSMUSG00000048400.14	ENSMUST00000180075.2	1152	5	9481	233	9481	-233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATGTCCACTAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	96292344	96286152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_96286451_96290977_96291107_96292085
ENSMUSG00000048400.14_96286413_96301862_1	chr8	-	689	5	NIC	ENSMUSG00000048400.14	novel	1152	5	NA	NA	-37	-493	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATCTCTGGATCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	96301862	96286412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_-_96286451_96290977_96291107_96292085_96292341_96297631_96297827_96301790
ENSMUSG00000048400.14_96290977_96302083_1	chr8	-	742	5	NIC	ENSMUSG00000048400.14	novel	1501	6	NA	NA	0	-5057	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATTTAATCCAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	96302083	96290976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_-_96291107_96292085_96292341_96297631_96297827_96301790_96301860_96301990
ENSMUSG00000048400.14_96292086_96302083_1	chr8	-	612	4	ISM	ENSMUSG00000048400.14	ENST00000219301.8	1812	7	880	6389	0	-6166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATGCATTCCTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	96302083	96292085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_96292345_96297635_96297827_96301790_96301860_96301990
ENSMUSG00000048400.14_96292156_96302239_1	chr8	-	698	4	ISM	ENSMUSG00000048400.14	ENST00000219301.8	1812	7	724	6459	-156	-6236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGCAAAAAGCTACATAAGC	NA	NA	NA	NA	NA	NA	NA	NA	96302239	96292155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_96292345_96297635_96297827_96301790_96301860_96301990
ENSMUSG00000048400.14_96292222_96302909_1	chr8	-	739	5	NIC	ENSMUSG00000048400.14	novel	1812	7	NA	NA	54	-6302	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGCCCTCCTGAAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	96302909	96292221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_-_96292341_96297631_96297827_96301790_96301860_96301990_96302239_96302801
ENSMUSG00000048400.14_96292282_96302909_1	chr8	-	679	5	ISM	ENSMUSG00000048400.14	ENST00000219301.8	1812	7	54	6585	54	-6362	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTCAGTCAATACCATCA	NA	NA	NA	NA	NA	NA	NA	NA	96302909	96292281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_96292345_96297635_96297827_96301790_96301860_96301990_96302239_96302801
ENSMUSG00000048400.14_96292283_96302909_1	chr8	-	678	5	NIC	ENSMUSG00000048400.14	novel	1812	7	NA	NA	54	-6363	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTCAGTCAATACCATC	NA	NA	NA	NA	NA	NA	NA	NA	96302909	96292282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_-_96292341_96297631_96297827_96301790_96301860_96301990_96302239_96302801
ENSMUSG00000048402.15_118765568_118768098_1	chr1	-	455	2	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	27818	2052	27818	-2052	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTCACACCTGCGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	118768098	118765567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118765908_118767983
ENSMUSG00000048402.15_118765648_118768174_1	chr1	-	451	2	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	27742	2132	27742	-2132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGACCCCATCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	118768174	118765647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118765908_118767983
ENSMUSG00000048402.15_118765708_118768241_1	chr1	-	458	2	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	27675	2192	27675	-2192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCAGCGAGGCTTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	118768241	118765707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118765908_118767983
ENSMUSG00000048402.15_118765858_118769705_1	chr1	-	447	3	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	26211	2342	26211	-2342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCCCAGCCAGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	118769705	118765857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118765908_118767983_118768321_118769645
ENSMUSG00000048402.15_118768183_118772114_1	chr1	-	454	3	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	23802	4667	23802	-4667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACGTGTCCAGGAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	118772114	118768182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118768321_118769645_118769928_118772080
ENSMUSG00000048402.15_118768293_118772212_1	chr1	-	442	3	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	23704	4777	23704	-4777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTGCAGCAGCGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	118772212	118768292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118768321_118769645_118769928_118772080
ENSMUSG00000048402.15_118769763_118773769_1	chr1	-	453	3	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	22147	6247	22147	-6247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCAGCGCCGAGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	118773769	118769762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118769928_118772080_118772246_118773646
ENSMUSG00000048402.15_118769866_118776179_1	chr1	-	444	4	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	19737	6350	19737	-6350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCATGTGAAGACTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	118776179	118769865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118769928_118772080_118772246_118773646_118773797_118776112
ENSMUSG00000048402.15_118772178_118781048_1	chr1	-	464	4	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	14868	8662	14868	-8662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGCCATATGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	118781048	118772177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118772246_118773646_118773797_118776112_118776298_118780987
ENSMUSG00000048402.15_118772216_118781112_1	chr1	-	490	4	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	14804	8700	14804	-8700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGAGAACCTGAAGACACA	NA	NA	NA	NA	NA	NA	NA	NA	118781112	118772215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118772246_118773646_118773797_118776112_118776298_118780987
ENSMUSG00000048402.15_118773661_118782204_1	chr1	-	478	4	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	13712	10145	13712	-10145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACAAGTGCACGGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	118782204	118773660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118773797_118776112_118776298_118780987_118781111_118782170
ENSMUSG00000048402.15_118773733_118782242_1	chr1	-	444	4	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	13674	10217	13674	-10217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAGAGCAGAAGCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	118782242	118773732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118773797_118776112_118776298_118780987_118781111_118782170
ENSMUSG00000048402.15_118782347_118795743_1	chr1	-	464	4	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	173	18831	173	-18831	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCAGATCCTGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	118795743	118782346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118782388_118783165_118783368_118794301_118794488_118795708
ENSMUSG00000048402.15_118783288_118795879_1	chr1	-	437	3	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	37	19772	37	-19772	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCGACCTACAACGCAT	NA	NA	NA	NA	NA	NA	NA	NA	118795879	118783287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_118783368_118794301_118794488_118795708
ENSMUSG00000048416.16_67281481_67307336_1	chr3	+	1144	8	FSM	ENSMUSG00000048416.16	ENST00000477042.6	1080	8	-68	4	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTTAAATTGGTCAACC	NA	NA	NA	NA	NA	NA	NA	NA	67281480	67307336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_67281627_67291883_67292032_67298310_67298356_67300224_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
ENSMUSG00000048416.16_67281481_67307383_1	chr3	+	1145	7	NNC	ENSMUSG00000048416.16	novel	1078	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTAAAATACACATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	67281480	67307383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_67281626_67291883_67292032_67300224_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
ENSMUSG00000048416.16_67281481_67307383_2	chr3	+	1143	7	NNC	ENSMUSG00000048416.16	novel	1078	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTAAAATACACATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	67281480	67307383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_67281627_67291883_67292032_67300224_67300309_67301267_67301401_67302591_67302745_67305113_67305244_67307034
ENSMUSG00000048416.16_67281481_67307383_3	chr3	+	1146	7	FSM	ENSMUSG00000048416.16	ENST00000359117.9	1078	7	-68	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTAAAATACACATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	67281480	67307383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_67281627_67291883_67292032_67300224_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
ENSMUSG00000048416.16_67281481_67307383_4	chr3	+	1145	7	NNC	ENSMUSG00000048416.16	novel	1078	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTAAAATACACATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	67281480	67307383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_67281627_67291883_67292032_67300224_67300309_67301267_67301397_67302584_67302745_67305114_67305244_67307034
ENSMUSG00000048416.16_67291918_67307234_1	chr3	+	687	5	ISM	ENSMUSG00000048416.16	ENST00000650753.1	917	6	10369	149	10369	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGCTGTACTTTGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	67291917	67307234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67292032_67300224_67300309_67301267_67301397_67302584_67302745_67307034
ENSMUSG00000048416.16_67291975_67307336_1	chr3	+	732	5	ISM	ENSMUSG00000048416.16	ENST00000650753.1	917	6	10426	47	10426	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTTAAATTGGTCAACC	NA	NA	NA	NA	NA	NA	NA	NA	67291974	67307336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_67292032_67300224_67300309_67301267_67301397_67302584_67302745_67307034
ENSMUSG00000048429.11_21504131_21504795_1	chr9	+	586	2	FSM	ENSMUSG00000048429.11	ENSMUST00000062125.11	3170	2	113	2471	113	-2471	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGCTACCTGCAGCCACG	NA	NA	NA	NA	NA	NA	NA	NA	21504130	21504795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_21504367_21504445
ENSMUSG00000048429.11_21504206_21504887_1	chr9	+	603	2	FSM	ENSMUSG00000048429.11	ENSMUST00000062125.11	3170	2	188	2379	188	-2379	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGATTGCGACATCAACG	NA	NA	NA	NA	NA	NA	NA	NA	21504205	21504887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_21504367_21504445
ENSMUSG00000048429.11_21504282_21504946_1	chr9	+	586	2	FSM	ENSMUSG00000048429.11	ENSMUST00000062125.11	3170	2	264	2320	264	-2320	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCGCCTCACCAGCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	21504281	21504946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_21504367_21504445
ENSMUSG00000048439.16_24374329_24388314_1	chr5	+	1718	5	ISM	ENSMUSG00000048439.16	ENSMUST00000049887.13	2914	7	4368	697	4368	-697	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGAGTGCGTGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	24374328	24388314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24374389_24380451_24380529_24382997_24383085_24386078_24386164_24386905
ENSMUSG00000048439.16_24386078_24388532_1	chr5	+	1713	2	ISM	ENSMUSG00000048439.16	ENSMUST00000049887.13	2914	7	16117	479	16117	-479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATGGGCACTCCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	24386077	24388532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_24386164_24386905
ENSMUSG00000048440.17_32755532_32770671_1	chr17	+	2141	13	FSM	ENSMUSG00000048440.17	ENSMUST00000169591.8	2242	13	0	101	0	-100	multi-exon	TRUE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGCTGGCTCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	32755531	32770671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_32755630_32755968_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ENSMUSG00000048442.16_115791004_115796617_1	chr11	+	369	3	NNC	ENSMUSG00000048442.16	novel	654	3	NA	NA	0	78	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACAACAGCGAGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	115791003	115796617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_115791069_115795938_115796133_115796507
ENSMUSG00000048442.16_115791028_115796617_1	chr11	+	345	3	NNC	ENSMUSG00000048442.16	novel	654	3	NA	NA	0	78	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACAACAGCGAGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	115791027	115796617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_115791069_115795938_115796133_115796507
ENSMUSG00000048442.16_115796029_115796785_1	chr11	+	382	2	NNC	ENSMUSG00000048442.16	novel	654	3	NA	NA	5001	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCCCCATCTGCCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	115796028	115796785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_115796133_115796507
ENSMUSG00000048450.11_37978774_37981249_1	chr5	-	312	2	FSM	ENSMUSG00000048450.11	ENSMUST00000063116.10	1935	2	678	945	678	-945	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCTGCCTTCGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	37981249	37978773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_37979045_37981208
ENSMUSG00000048450.11_37978836_37981304_1	chr5	-	305	2	FSM	ENSMUSG00000048450.11	ENSMUST00000063116.10	1935	2	623	1007	623	-1007	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGAGACTGCAGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	37981304	37978835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_37979045_37981208
ENSMUSG00000048450.11_37979092_37981463_1	chr5	-	298	2	NNC	ENSMUSG00000048450.11	novel	1935	2	NA	NA	464	-1263	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTAACTCCTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	37981463	37979091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_37979135_37981208
ENSMUSG00000048481.16_18725244_18735014_1	chr7	+	1198	3	FSM	ENSMUSG00000048481.16	ENST00000322217.6	1885	3	14	673	0	-673	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTCACCCCCACACAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	18725243	18735014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_18725280_18725982_18726546_18734415
ENSMUSG00000048481.16_18725894_18735120_1	chr7	+	1357	2	ISM	ENSMUSG00000048481.16	ENSMUST00000131087.2	1951	3	650	571	650	-567	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCCTGCTTGGCGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	18725893	18735120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_18726546_18734415
ENSMUSG00000048482.15_109522912_109557352_1	chr2	+	3834	2	FSM	ENSMUSG00000048482.15	ENSMUST00000111050.10	3965	2	131	0	131	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTTTTAATGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	109522911	109557352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_109523120_109553726
ENSMUSG00000048482.15_109524020_109553772_1	chr2	+	281	2	FSM	ENSMUSG00000048482.15	ENSMUST00000111045.9	3973	2	112	3580	93	-3580	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCATACTTCGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	109524019	109553772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_109524255_109553726
ENSMUSG00000048482.15_109553422_109554085_1	chr2	+	432	2	NNC	ENSMUSG00000048482.15	novel	3905	2	NA	NA	166	-3267	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATACAAAAATTACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	109553421	109554085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_109553493_109553724
ENSMUSG00000048486.7_163310519_163314417_1	chr2	-	1615	2	FSM	ENSMUSG00000048486.7	ENSMUST00000109418.2	3967	2	132	2220	132	-2220	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTGTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	163314417	163310518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_163312039_163314322
ENSMUSG00000048486.7_163310573_163314549_1	chr2	-	1693	2	FSM	ENSMUSG00000048486.7	ENSMUST00000109418.2	3967	2	0	2274	0	-2274	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAAGCTCCAGTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	163314549	163310572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_163312039_163314322
ENSMUSG00000048490.15_76091615_76169925_1	chr16	-	649	3	FSM	ENSMUSG00000048490.15	ENST00000400202.5	7651	3	12	6990	12	-3865	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGAGGAGCTCTTTCACG	NA	NA	NA	NA	NA	NA	NA	NA	76169925	76091614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_76091904_76127633_76127753_76169684
ENSMUSG00000048495.17_57427399_57435955_1	chr1	-	971	6	ISM	ENSMUSG00000048495.17	ENSMUST00000162686.8	1847	8	10305	3	10305	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATTGGTGGAGTGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	57435955	57427398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885
ENSMUSG00000048495.17_57427564_57445602_1	chr1	-	1021	8	FSM	ENSMUSG00000048495.17	ENSMUST00000162686.8	1847	8	658	168	658	-168	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAATAGGAAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	57445602	57427563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440527_57440683_57445542
ENSMUSG00000048495.17_57427825_57445833_1	chr1	-	991	8	FSM	ENSMUSG00000048495.17	ENSMUST00000162686.8	1847	8	427	429	427	-429	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAGATACCTATGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	57445833	57427824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440527_57440683_57445542
ENSMUSG00000048495.17_57430588_57446049_1	chr1	-	1023	6	ISM	ENSMUSG00000048495.17	ENSMUST00000162686.8	1847	8	211	3192	211	-3192	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTTATTCAGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	57446049	57430587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440527_57440683_57445542
ENSMUSG00000048497.12_62540275_62556296_1	chr11	+	944	2	FSM	ENSMUSG00000048497.12	ENSMUST00000129162.3	1828	2	0	884	0	234	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATACTGCAGGTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	62540274	62556296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_62540418_62555495
ENSMUSG00000048497.12_62540275_62556350_1	chr11	+	998	2	FSM	ENSMUSG00000048497.12	ENSMUST00000129162.3	1828	2	0	830	0	288	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCCTCAGTAAGGAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	62540274	62556350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_62540418_62555495
ENSMUSG00000048537.17_44597854_44605694_1	chr9	-	1249	5	ISM	ENSMUSG00000048537.17	ENST00000356063.9	5060	20	32782	245	7336	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGGGGCTGGGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	44605694	44597853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44598731_44598836_44598996_44599913_44600000_44605325_44605429_44605670
ENSMUSG00000048537.17_44598165_44609142_1	chr9	-	1272	7	ISM	ENSMUSG00000048537.17	ENST00000356063.9	5060	20	29334	556	3888	-556	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCACTGCTTCTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	44609142	44598164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44598731_44598836_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048
ENSMUSG00000048537.17_44598321_44609349_1	chr9	-	1240	8	ISM	ENSMUSG00000048537.17	ENST00000356063.9	5060	20	29127	712	3681	-712	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTTGTCACTACTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	44609349	44598320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44598731_44598836_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222
ENSMUSG00000048537.17_44598470_44610702_1	chr9	-	1318	9	ISM	ENSMUSG00000048537.17	ENST00000356063.9	5060	20	27774	861	2328	-861	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCTGCCAAAGATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	44610702	44598469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44598731_44598836_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643
ENSMUSG00000048537.17_44598668_44607390_1	chr9	-	618	7	ISM	ENSMUSG00000048537.17	ENST00000600882.6	5234	22	31086	1059	5640	-1059	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAGCTCCAGTCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	44607390	44598667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44598731_44598836_44598996_44599720_44599754_44599913_44600000_44605325_44605429_44605670_44605788_44607333
ENSMUSG00000048537.17_44598931_44615189_1	chr9	-	1238	10	ISM	ENSMUSG00000048537.17	ENSMUST00000144251.8	3589	17	9348	1326	-2159	-1322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGCAGAGGCCATGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	44615189	44598930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099
ENSMUSG00000048537.17_44599914_44615468_1	chr9	-	1284	10	ISM	ENSMUSG00000048537.17	ENSMUST00000144251.8	3589	17	9069	2309	-2438	-2305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGCAGGGAGGACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	44615468	44599913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357
ENSMUSG00000048537.17_44605384_44619273_1	chr9	-	1232	10	ISM	ENSMUSG00000048537.17	ENSMUST00000144251.8	3589	17	5264	7779	5264	-7775	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGAAGCGCTGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	44619273	44605383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181
ENSMUSG00000048537.17_44607361_44622473_1	chr9	-	1274	10	ISM	ENSMUSG00000048537.17	ENSMUST00000156918.8	3485	16	2089	9756	2064	-9752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCCGGGAAAAGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	44622473	44607360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44622219_44622358_44622444
ENSMUSG00000048537.17_44607434_44622520_1	chr9	-	1248	10	ISM	ENSMUSG00000048537.17	ENSMUST00000156918.8	3485	16	2042	9829	2017	-9825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCGGGAGCAAGTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	44622520	44607433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44622219_44622358_44622444
ENSMUSG00000048537.17_44609291_44623072_1	chr9	-	1242	9	ISM	ENSMUSG00000048537.17	ENSMUST00000156918.8	3485	16	1490	11686	1465	-11682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGACAGCATGGAGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	44623072	44609290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44622219_44622358_44622444_44622586_44622937
ENSMUSG00000048537.17_44609340_44615161_1	chr9	-	625	5	ISM	ENSMUSG00000048537.17	ENST00000600882.6	5234	22	23315	11731	-2131	-11731	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTGGAGAGGAGGGCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	44615161	44609339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44609518_44610643_44610747_44610852_44610994_44612242_44612384_44615099
ENSMUSG00000048537.17_44609485_44615468_1	chr9	-	619	6	ISM	ENSMUSG00000048537.17	ENST00000600882.6	5234	22	23008	11876	-2438	-11876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCGGAGCTGAAGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	44615468	44609484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44609518_44610643_44610747_44610852_44610994_44612242_44612384_44615099_44615190_44615357
ENSMUSG00000048537.17_44610908_44626920_1	chr9	-	1314	8	ISM	ENSMUSG00000048537.17	ENST00000356063.9	5060	20	11556	13299	-2358	-13299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCCTCTTCACAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	44626920	44610907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44622219_44622358_44622444_44622586_44622937_44623220_44626610
ENSMUSG00000048537.17_44612331_44622501_1	chr9	-	605	6	ISM	ENSMUSG00000048537.17	ENST00000600882.6	5234	22	15975	14722	2036	-14722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCCGGGCTGGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	44622501	44612330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44612384_44615099_44615190_44615357_44615469_44619181_44619338_44622219_44622358_44622444
ENSMUSG00000048537.17_44612366_44622579_1	chr9	-	648	6	ISM	ENSMUSG00000048537.17	ENST00000600882.6	5234	22	15897	14757	1958	-14757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTGTAGACTTAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	44622579	44612365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44612384_44615099_44615190_44615357_44615469_44619181_44619338_44622219_44622358_44622444
ENSMUSG00000048537.17_44623013_44627059_1	chr9	-	656	2	ISM	ENSMUSG00000048537.17	ENST00000356063.9	5060	20	11417	25404	-2497	-25404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGAGCATGGAGCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	44627059	44623012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44623220_44626610
ENSMUSG00000048537.17_44627092_44638439_1	chr9	-	1260	4	ISM	ENSMUSG00000048537.17	ENST00000356063.9	5060	20	37	29483	37	-29483	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGGACAGTATGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	44638439	44627091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44627963_44629570_44629697_44637306_44637478_44638347
ENSMUSG00000048537.17_44627802_44639376_1	chr9	-	642	5	ISM	ENSMUSG00000048537.17	ENSMUST00000138356.8	5600	23	0	30197	0	-30193	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGCTGCCACATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	44639376	44627801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44627963_44629570_44629697_44637306_44637478_44638347_44638472_44639316
ENSMUSG00000048578.12_115285451_115288310_1	chr5	-	855	3	ISM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	7928	4411	7928	-4411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATAAGTGGGACGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	115288310	115285450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115286204_115288127_115288186_115288266
ENSMUSG00000048578.12_115285527_115288344_1	chr5	-	813	3	ISM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	7894	4487	7894	-4487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTGGGTGTGTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	115288344	115285526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115286204_115288127_115288186_115288266
ENSMUSG00000048578.12_115285649_115288919_1	chr5	-	835	4	ISM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	7319	4609	7319	-4609	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTCATTATATACCTAG	NA	NA	NA	NA	NA	NA	NA	NA	115288919	115285648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874
ENSMUSG00000048578.12_115285715_115288978_1	chr5	-	828	4	ISM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	7260	4675	7260	-4675	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCTGGCCCCACCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	115288978	115285714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874
ENSMUSG00000048578.12_115285789_115289105_1	chr5	-	881	4	ISM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	7133	4749	7133	-4749	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAGATAAGAAAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	115289105	115285788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874
ENSMUSG00000048578.12_115286038_115296083_1	chr5	-	802	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	155	4998	155	-4998	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCCTATCCTGGTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	115296083	115286037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ENSMUSG00000048581.13_63822299_63827784_1	chr3	-	1024	2	ISM	ENSMUSG00000048581.13	ENSMUST00000061706.7	1640	5	9109	194	9109	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGGATTGAACTCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	63827784	63822298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_63823160_63827621
ENSMUSG00000048581.13_63822483_63832876_1	chr3	-	960	3	ISM	ENSMUSG00000048581.13	ENSMUST00000061706.7	1640	5	4017	378	4017	-378	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	63832876	63822482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_63823160_63827621_63827783_63832754
ENSMUSG00000048581.13_63822711_63836812_1	chr3	-	953	5	FSM	ENSMUSG00000048581.13	ENSMUST00000061706.7	1640	5	81	606	81	-606	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCACTTTTCATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	63836812	63822710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_63823160_63827621_63827783_63832754_63832903_63834684_63834745_63836677
ENSMUSG00000048612.17_37887758_37896176_1	chr19	-	1149	6	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	135595	23	135595	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGTGGTATTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	37896176	37887757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034
ENSMUSG00000048612.17_37887758_37911531_1	chr19	-	2168	14	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	120240	23	120240	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGTGGTATTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	37911531	37887757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405
ENSMUSG00000048612.17_37887916_37919512_1	chr19	-	2192	16	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	112259	181	112259	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTCTGCATTCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	37919512	37887915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429
ENSMUSG00000048612.17_37888049_37901894_1	chr19	-	1153	9	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	129877	314	129877	-291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAAAGTCAGACAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	37901894	37888048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784
ENSMUSG00000048612.17_37889743_37923340_1	chr19	-	2131	17	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	108431	2008	108431	-1985	internal_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTCTGCTGCTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	37923340	37889742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207
ENSMUSG00000048612.17_37890272_37924395_1	chr19	-	2171	17	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	107376	2537	107376	-2514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGAGGCCTTCTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	37924395	37890271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294
ENSMUSG00000048612.17_37892145_37924649_1	chr19	-	2180	17	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	107122	4410	107122	-4387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCACCCGGGTGATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	37924649	37892144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508
ENSMUSG00000048612.17_37896034_37926389_1	chr19	-	2188	17	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	105382	8299	105382	-8276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCTTGAAAGATGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	37926389	37896033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311
ENSMUSG00000048612.17_37899342_37927856_1	chr19	-	2154	17	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	103915	11607	103915	-11584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGGATAGGAGGCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	37927856	37899341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747
ENSMUSG00000048612.17_37899568_37928429_1	chr19	-	2165	17	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	103342	11833	103342	-11810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAACATCACACCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	37928429	37899567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292
ENSMUSG00000048612.17_37901891_37930741_1	chr19	-	2113	17	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	101030	14156	101030	-14133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGAAGAGCGTCTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	37930741	37901890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665
ENSMUSG00000048612.17_37904908_37934144_1	chr19	-	2105	17	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	97627	17173	97627	-17150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCTGGAGAACCGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	37934144	37904907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078
ENSMUSG00000048612.17_37904979_37934192_1	chr19	-	2082	17	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	97579	17244	97579	-17221	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGACCTGAAGATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	37934192	37904978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078
ENSMUSG00000048612.17_37909196_37938085_1	chr19	-	2108	17	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	93686	21461	93686	-21438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAACACTCTCAACCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	37938085	37909195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998
ENSMUSG00000048612.17_37909875_37939958_1	chr19	-	2115	17	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	91813	22140	91813	-22117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGCCTGACAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	37939958	37909874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874
ENSMUSG00000048612.17_37911463_37941462_1	chr19	-	2113	17	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	90309	23728	90309	-23705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTACAGAGGCAAGTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	37941462	37911462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390
ENSMUSG00000048612.17_37911518_37941521_1	chr19	-	2117	17	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	90250	23783	90250	-23760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGAGGATGTAGCCGACT	NA	NA	NA	NA	NA	NA	NA	NA	37941521	37911517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390
ENSMUSG00000048612.17_37919455_37942926_1	chr19	-	2116	16	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	88845	31720	88845	-31697	internal_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCATTACTGGCTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	37942926	37919454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814
ENSMUSG00000048612.17_37921154_37944960_1	chr19	-	2108	16	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	86811	33419	86811	-33396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCGGAAGCCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	37944960	37921153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890
ENSMUSG00000048612.17_37924537_37955574_1	chr19	-	2207	16	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	76197	36802	76197	-36779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCAGAGTTGATTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	37955574	37924536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463
ENSMUSG00000048612.17_37924596_37955574_1	chr19	-	2148	16	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	76197	36861	76197	-36838	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGCTTCTCTGGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	37955574	37924595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463
ENSMUSG00000048612.17_37926312_37960705_1	chr19	-	2147	17	ISM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	71094	38554	71066	-38554	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGGGAAAATCCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	37960705	37926311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622
ENSMUSG00000048612.17_37927747_37963374_1	chr19	-	2183	18	ISM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	68425	39989	68397	-39989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTTAAGTATGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	37963374	37927746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305
ENSMUSG00000048612.17_37928292_37966201_1	chr19	-	2178	18	ISM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	65598	40534	65570	-40534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTAACCAGAAGCGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	37966201	37928291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097
ENSMUSG00000048612.17_37928406_37968854_1	chr19	-	2122	19	ISM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	62945	40648	62917	-40648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACTGGAAACAGCGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	37968854	37928405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796
ENSMUSG00000048612.17_37930712_37969764_1	chr19	-	2178	19	ISM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	62035	42954	62007	-42954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACGCAAGAAAGATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	37969764	37930711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670
ENSMUSG00000048612.17_37934079_37971608_1	chr19	-	2148	20	ISM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	60191	46321	60163	-46321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCGTTTGCTCTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	37971608	37934078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536
ENSMUSG00000048612.17_37937999_37955580_1	chr19	-	1172	8	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	76191	50264	76191	-50241	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTTTGAATTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	37955580	37937998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463
ENSMUSG00000048612.17_37937999_37974537_1	chr19	-	2153	20	ISM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	57262	50241	57234	-50241	internal_fragment	TRUE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTTTGAATTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	37974537	37937998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408
ENSMUSG00000048612.17_37939875_37975263_1	chr19	-	2156	20	ISM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	56536	52117	56508	-52117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTTTGGTGACAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	37975263	37939874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096
ENSMUSG00000048612.17_37941471_37986741_1	chr19	-	2110	21	ISM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	45058	53713	45030	-53713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCAAGTCTTGTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	37986741	37941470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663
ENSMUSG00000048612.17_37942815_38011092_1	chr19	-	2157	21	ISM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	20707	55057	20679	-55057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGACCATTAAAATACACT	NA	NA	NA	NA	NA	NA	NA	NA	38011092	37942814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000
ENSMUSG00000048612.17_37942926_37968893_1	chr19	-	1131	11	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	62878	55191	62878	-55168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGATACACGAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	37968893	37942925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796
ENSMUSG00000048612.17_37944886_37969786_1	chr19	-	1200	11	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	61985	57151	61985	-57128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCCTCTTCCTATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	37969786	37944885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670
ENSMUSG00000048612.17_37944886_38031799_1	chr19	-	2141	22	ISM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	0	57128	0	-57128	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCCTCTTCCTATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	38031799	37944885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ENSMUSG00000048612.17_37949397_37974433_1	chr19	-	1104	13	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	57338	61662	57338	-61639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAATACAGCCGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	37974433	37949396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37949546_37955463_37955581_37956775_37956901_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408
ENSMUSG00000048612.17_37949459_37974477_1	chr19	-	1086	13	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	57294	61724	57294	-61701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCAGCATTGGGAACTA	NA	NA	NA	NA	NA	NA	NA	NA	37974477	37949458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37949546_37955463_37955581_37956775_37956901_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408
ENSMUSG00000048612.17_37955492_37975190_1	chr19	-	1125	13	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	56581	67757	56581	-67734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTGATGACCTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	37975190	37955491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37955581_37956775_37956901_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096
ENSMUSG00000048612.17_37956818_37983906_1	chr19	-	1104	13	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	47865	69083	47865	-69060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATTTCCAGATCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	37983906	37956817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37956901_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869
ENSMUSG00000048644.9_4308179_4309137_1	chr8	-	556	2	FSM	ENSMUSG00000048644.9	ENSMUST00000053252.9	1212	2	137	519	137	-519	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTCTACATACTTATC	NA	NA	NA	NA	NA	NA	NA	NA	4309137	4308178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_4308648_4309050
ENSMUSG00000048668.17_128334328_128339542_1	chr6	-	1290	3	FSM	ENSMUSG00000048668.17	ENSMUST00000057421.15	1584	3	289	5	233	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGCAGCCTCGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	128339542	128334327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_128335157_128336068_128336318_128339330
ENSMUSG00000048668.17_128334328_128339658_1	chr6	-	1406	3	FSM	ENSMUSG00000048668.17	ENSMUST00000057421.15	1584	3	173	5	117	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGCAGCCTCGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	128339658	128334327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_128335157_128336068_128336318_128339330
ENSMUSG00000048668.17_128336195_128339658_1	chr6	-	578	3	ISM	ENSMUSG00000048668.17	ENSMUST00000112152.8	2015	4	117	2232	117	-1867	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTTCACCAACA	NA	NA	NA	NA	NA	NA	NA	NA	128339658	128336194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_128336318_128339020_128339148_128339330
ENSMUSG00000048699.5_101463706_101466773_1	chr15	-	486	3	ISM	ENSMUSG00000048699.5	ENST00000549264.2	707	6	52368	0	4612	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGTGCAGGTGGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	101466773	101463705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101463916_101464668_101464907_101466735
ENSMUSG00000048699.5_101463849_101467653_1	chr15	-	428	4	ISM	ENSMUSG00000048699.5	ENST00000549264.2	707	6	51488	143	3732	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAAGCTGGCCGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	101467653	101463848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101463916_101464668_101464907_101466735_101466832_101467626
ENSMUSG00000048699.5_101463894_101468881_1	chr15	-	447	5	ISM	ENSMUSG00000048699.5	ENST00000549264.2	707	6	50260	188	2504	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCGATGCCGAGCAACGC	NA	NA	NA	NA	NA	NA	NA	NA	101468881	101463893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101463916_101464668_101464907_101466735_101466832_101467626_101467688_101468851
ENSMUSG00000048699.5_101464669_101468934_1	chr15	-	478	4	ISM	ENSMUSG00000048699.5	ENST00000549264.2	707	6	50207	963	2451	-963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGACCAATATCTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	101468934	101464668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101464907_101466735_101466832_101467626_101467688_101468851
ENSMUSG00000048701.14_69932951_70027575_1	chr10	+	4056	9	FSM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	0	1455	0	-1455	multi-exon	TRUE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCGGGTACCACTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	69932950	70027575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_69933412_69978408_69978559_69990537_69990667_70002831_70002936_70004921_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907
ENSMUSG00000048701.14_69933162_70027720_1	chr10	+	3984	9	NNC	ENSMUSG00000048701.14	novel	5511	9	NA	NA	211	-1310	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGACAGATTTCTCGACC	NA	NA	NA	NA	NA	NA	NA	NA	69933161	70027720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_69933412_69978408_69978559_69990543_69990667_70002831_70002936_70004921_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907
ENSMUSG00000048701.14_69978409_70027937_1	chr10	+	3957	8	ISM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	45458	1093	45458	-1093	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTGATCCTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	69978408	70027937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69978559_69990537_69990667_70002831_70002936_70004921_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907
ENSMUSG00000048701.14_69990574_70028165_1	chr10	+	3999	7	ISM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	57623	865	57623	-865	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGATGCCTACCAAAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	69990573	70028165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69990667_70002831_70002936_70004921_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907
ENSMUSG00000048701.14_69990624_70028219_1	chr10	+	4003	7	ISM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	57673	811	57673	-811	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCCATTGATGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	69990623	70028219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69990667_70002831_70002936_70004921_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907
ENSMUSG00000048701.14_70002921_70028336_1	chr10	+	3988	6	ISM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	69970	694	69970	-694	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTAAATTTTTGATTAC	NA	NA	NA	NA	NA	NA	NA	NA	70002920	70028336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70002936_70004921_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907
ENSMUSG00000048701.14_70005004_70028449_1	chr10	+	4004	5	ISM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	72053	581	72053	-581	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGGGATCCTCTGTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	70005003	70028449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907
ENSMUSG00000048701.14_70005061_70028493_1	chr10	+	3991	5	ISM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	72110	537	72110	-537	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTGCGTGTGTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	70005060	70028493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907
ENSMUSG00000048701.14_70010877_70028613_1	chr10	+	4053	4	ISM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	77926	417	77926	-417	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAACAACAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	70010876	70028613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70010998_70017989_70018091_70023520_70023646_70024907
ENSMUSG00000048701.14_70018048_70028787_1	chr10	+	4048	3	ISM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	85097	243	85097	-243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGCCAGATGCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	70018047	70028787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_70018091_70023520_70023646_70024907
ENSMUSG00000048706.4_80829661_80873865_1	chr4	+	2288	2	FSM	ENSMUSG00000048706.4	ENSMUST00000055922.4	3066	2	778	0	778	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTGGTGTTATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	80829660	80873865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_80829883_80871799
ENSMUSG00000048707.10_25152804_25154094_1	chr2	+	1213	2	ISM	ENSMUSG00000048707.10	ENST00000409012.6	2652	5	116	5804	116	-5803	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGCTGAGCCGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	25152803	25154094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25153192_25153269
ENSMUSG00000048707.10_25153449_25158903_1	chr2	+	1177	2	ISM	ENSMUSG00000048707.10	ENST00000409012.6	2652	5	761	995	761	-994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGGCACAGGAAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	25153448	25158903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25154566_25158843
ENSMUSG00000048707.10_25153582_25159183_1	chr2	+	1237	3	ISM	ENSMUSG00000048707.10	ENST00000409012.6	2652	5	894	715	894	-714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGTGGCAGGAACAGACA	NA	NA	NA	NA	NA	NA	NA	NA	25153581	25159183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25154566_25158843_25159058_25159144
ENSMUSG00000048707.10_25153668_25159202_1	chr2	+	1170	3	ISM	ENSMUSG00000048707.10	ENST00000409012.6	2652	5	980	696	980	-695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGTGCAGACTCCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	25153667	25159202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25154566_25158843_25159058_25159144
ENSMUSG00000048707.10_25153734_25159251_1	chr2	+	1153	3	ISM	ENSMUSG00000048707.10	ENST00000409012.6	2652	5	1046	647	1046	-646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCAGGTGGAGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	25153733	25159251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25154566_25158843_25159058_25159144
ENSMUSG00000048707.10_25154253_25159898_2	chr2	+	1165	4	FSM	ENSMUSG00000048707.10	ENSMUST00000114336.4	2787	4	1623	-1	1565	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTGCCTTCTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	25154252	25159898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_25154566_25158843_25159058_25159144_25159252_25159367
ENSMUSG00000048728.16_50763805_50778270_1	chr11	-	1796	5	FSM	ENSMUSG00000048728.16	ENST00000519564.2	1851	5	57	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTGCTGAGGGGATGATG	NA	NA	NA	NA	NA	NA	NA	NA	50778270	50763804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_50765103_50774010_50774101_50774511_50774639_50777195_50777326_50778119
ENSMUSG00000048728.16_50763917_50778270_1	chr11	-	1684	5	FSM	ENSMUSG00000048728.16	ENST00000519564.2	1851	5	57	110	0	-110	multi-exon	FALSE	canonical	NA	NA	NA	NA	2469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAGAAACCTTACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	50778270	50763916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_50765103_50774010_50774101_50774511_50774639_50777195_50777326_50778119
ENSMUSG00000048728.16_50763917_50778328_1	chr11	-	1736	5	NNC	ENSMUSG00000048728.16	novel	1851	5	NA	NA	0	-110	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAGAAACCTTACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	50778328	50763916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_50765103_50774010_50774101_50774511_50774639_50777201_50777326_50778119
ENSMUSG00000048728.16_50763917_50778328_2	chr11	-	1742	5	FSM	ENSMUSG00000048728.16	ENST00000519564.2	1851	5	-1	110	0	-110	multi-exon	FALSE	canonical	NA	NA	NA	NA	2468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAGAAACCTTACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	50778328	50763916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_50765103_50774010_50774101_50774511_50774639_50777195_50777326_50778119
ENSMUSG00000048758.15_106306653_106308371_1	chr9	+	331	4	FSM	ENSMUSG00000048758.15	ENSMUST00000098994.7	583	4	-84	336	0	-336	multi-exon	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCCATCAAGGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	106306652	106308371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_106306776_106307174_106307214_106307506_106307572_106308267
ENSMUSG00000048758.15_106306653_106308371_2	chr9	+	331	4	NNC	ENSMUSG00000048758.15	novel	733	4	NA	NA	0	-336	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCCATCAAGGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	106306652	106308371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_106306770_106307168_106307214_106307506_106307572_106308267
ENSMUSG00000048758.15_106306653_106308371_3	chr9	+	337	4	FSM	ENSMUSG00000048758.15	ENSMUST00000150576.8	733	4	0	396	0	-336	multi-exon	FALSE	canonical	NA	NA	NA	NA	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCCATCAAGGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	106306652	106308371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_106306776_106307168_106307214_106307506_106307572_106308267
ENSMUSG00000048758.15_106306761_106308707_1	chr9	+	620	4	NNC	ENSMUSG00000048758.15	novel	710	4	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3986	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGATGACCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	106306760	106308707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_106306831_106307168_106307214_106307506_106307572_106308267
ENSMUSG00000048758.15_106306761_106308731_1	chr9	+	651	4	NNC	ENSMUSG00000048758.15	novel	710	4	NA	NA	23	24	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTTCTTACAAATAAACT	NA	NA	NA	NA	NA	NA	NA	NA	106306760	106308731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_106306832_106307162_106307214_106307506_106307572_106308267
ENSMUSG00000048763.12_96197942_96236825_1	chr11	+	958	4	FSM	ENSMUSG00000048763.12	ENST00000472863.5	1919	4	29	932	26	-405	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAATGCCTACGCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	96197941	96236825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_96198024_96231889_96231978_96235188_96235523_96236371
ENSMUSG00000048763.12_96197975_96236431_1	chr11	+	609	6	FSM	ENSMUSG00000048763.12	ENST00000460160.5	1467	6	59	799	59	-799	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCGGCGGGGGCGGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	96197974	96236431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_96198024_96212846_96213013_96214089_96214272_96231889_96231978_96235458_96235523_96236371
ENSMUSG00000048763.12_96205534_96236885_1	chr11	+	1309	5	NNC	ENSMUSG00000048763.12	novel	1800	5	NA	NA	145	-345	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	977	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGTACCCCCCGACCC	NA	NA	NA	NA	NA	NA	NA	NA	96205533	96236885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_96205726_96214090_96214272_96231889_96231978_96235188_96235523_96236371
ENSMUSG00000048763.12_96205534_96236885_2	chr11	+	1307	5	NNC	ENSMUSG00000048763.12	novel	1800	5	NA	NA	145	-345	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGTACCCCCCGACCC	NA	NA	NA	NA	NA	NA	NA	NA	96205533	96236885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_96205726_96214089_96214272_96231892_96231978_96235188_96235523_96236371
ENSMUSG00000048763.12_96205534_96236885_3	chr11	+	1310	5	FSM	ENSMUSG00000048763.12	ENST00000489475.5	1800	5	145	345	145	-345	multi-exon	FALSE	canonical	NA	NA	NA	NA	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGTACCCCCCGACCC	NA	NA	NA	NA	NA	NA	NA	NA	96205533	96236885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_96205726_96214089_96214272_96231889_96231978_96235188_96235523_96236371
ENSMUSG00000048763.12_96205534_96236885_4	chr11	+	1308	5	NNC	ENSMUSG00000048763.12	novel	1800	5	NA	NA	145	-345	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGTACCCCCCGACCC	NA	NA	NA	NA	NA	NA	NA	NA	96205533	96236885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_96205726_96214089_96214272_96231889_96231978_96235190_96235523_96236371
ENSMUSG00000048763.12_96205534_96236885_5	chr11	+	1307	5	NNC	ENSMUSG00000048763.12	novel	1800	5	NA	NA	145	-345	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGTACCCCCCGACCC	NA	NA	NA	NA	NA	NA	NA	NA	96205533	96236885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_96205726_96214089_96214272_96231889_96231978_96235188_96235523_96236374
ENSMUSG00000048763.12_96205597_96237097_1	chr11	+	1459	5	FSM	ENSMUSG00000048763.12	ENST00000489475.5	1800	5	208	133	208	-133	multi-exon	FALSE	canonical	NA	NA	NA	NA	2208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCCCTATGGGCCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	96205596	96237097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_96205726_96214089_96214272_96231889_96231978_96235188_96235523_96236371
ENSMUSG00000048763.12_96205597_96237097_2	chr11	+	1456	5	NNC	ENSMUSG00000048763.12	novel	1800	5	NA	NA	208	-133	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1929	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCCCTATGGGCCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	96205596	96237097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_96205726_96214089_96214272_96231892_96231978_96235188_96235523_96236371
ENSMUSG00000048763.12_96212888_96236533_1	chr11	+	621	5	ISM	ENSMUSG00000048763.12	ENST00000460160.5	1467	6	14972	697	-1264	-697	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTGGAGAAGGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	96212887	96236533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96213013_96214089_96214272_96231889_96231978_96235458_96235523_96236371
ENSMUSG00000048763.12_96212931_96236602_1	chr11	+	647	5	ISM	ENSMUSG00000048763.12	ENST00000460160.5	1467	6	15015	628	-1221	-628	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAACCTCAGCGAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	96212930	96236602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96213013_96214089_96214272_96231889_96231978_96235458_96235523_96236371
ENSMUSG00000048763.12_96214152_96236704_1	chr11	+	605	4	ISM	ENSMUSG00000048763.12	ENST00000460160.5	1467	6	16236	526	0	-526	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTCTCCGGCCGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	96214151	96236704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96214272_96231889_96231978_96235458_96235523_96236371
ENSMUSG00000048763.12_96214152_96236763_1	chr11	+	664	4	ISM	ENSMUSG00000048763.12	ENST00000460160.5	1467	6	16236	467	0	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTACACTCCATGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	96214151	96236763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96214272_96231889_96231978_96235458_96235523_96236371
ENSMUSG00000048763.12_96214152_96237202_1	chr11	+	1364	4	NNC	ENSMUSG00000048763.12	novel	3190	4	NA	NA	0	-28	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCCAAACTGACACACCTG	NA	NA	NA	NA	NA	NA	NA	NA	96214151	96237202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_96214272_96231889_96231969_96235188_96235523_96236371
ENSMUSG00000048763.12_96214152_96237215_1	chr11	+	1380	4	NNC	ENSMUSG00000048763.12	novel	3190	4	NA	NA	0	-15	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGTGATGGGAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	96214151	96237215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_96214272_96231889_96231978_96235188_96235523_96236377
ENSMUSG00000048763.12_96214152_96237230_1	chr11	+	1401	4	ISM	ENSMUSG00000048763.12	ENST00000489475.5	1800	5	8763	0	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCGGGCTGGGGAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	96214151	96237230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96214272_96231889_96231978_96235188_96235523_96236371
ENSMUSG00000048763.12_96231888_96236885_1	chr11	+	668	3	ISM	ENSMUSG00000048763.12	ENST00000460160.5	1467	6	33972	345	-2707	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGTACCCCCCGACCC	NA	NA	NA	NA	NA	NA	NA	NA	96231887	96236885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_96231978_96235458_96235523_96236371
ENSMUSG00000048763.12_96231888_96247374_1	chr11	+	1349	4	NNC	ENSMUSG00000048763.12	novel	1800	5	NA	NA	-2707	8618	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1019	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAAAAGGGGATGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	96231887	96247374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_96231978_96235188_96235523_96236371_96237231_96247308
ENSMUSG00000048763.12_96231888_96247374_2	chr11	+	1331	4	NNC	ENSMUSG00000048763.12	novel	1800	5	NA	NA	-2707	8618	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAAAAGGGGATGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	96231887	96247374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_96231978_96235188_96235523_96236371_96237231_96247326
ENSMUSG00000048772.16_117109239_117125782_1	chr4	+	815	3	FSM	ENSMUSG00000048772.16	ENST00000372235.7	830	3	15	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTATCCTGGGGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	117109238	117125782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_117109332_117123056_117123173_117125176
ENSMUSG00000048772.16_117109239_117125782_2	chr4	+	808	3	NNC	ENSMUSG00000048772.16	novel	830	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTATCCTGGGGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	117109238	117125782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_117109332_117123063_117123173_117125176
ENSMUSG00000048779.6_100587379_100591404_1	chr7	-	1178	2	FSM	ENSMUSG00000048779.6	ENST00000680955.1	1177	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	7529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTGAGGCCCCAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	100591404	100587378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_100588392_100591239
ENSMUSG00000048779.6_100587379_100591404_2	chr7	-	1174	2	NNC	ENSMUSG00000048779.6	novel	1177	2	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTGAGGCCCCAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	100591404	100587378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_100588392_100591243
ENSMUSG00000048799.9_53816122_53819028_1	chr18	-	489	2	ISM	ENSMUSG00000048799.9	ENST00000675442.1	3944	20	58294	399	58294	-399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAATTGTGTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	53819028	53816121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53816537_53818954
ENSMUSG00000048799.9_53816181_53819073_1	chr18	-	475	2	ISM	ENSMUSG00000048799.9	ENST00000675442.1	3944	20	58249	458	58249	-458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTACTGTATATAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	53819073	53816180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53816537_53818954
ENSMUSG00000048799.9_53816317_53836221_1	chr18	-	493	4	ISM	ENSMUSG00000048799.9	ENST00000675442.1	3944	20	41101	594	41101	-594	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGCCAGTTAAAAACCACC	NA	NA	NA	NA	NA	NA	NA	NA	53836221	53816316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193
ENSMUSG00000048799.9_53816419_53839911_1	chr18	-	485	5	ISM	ENSMUSG00000048799.9	ENST00000675442.1	3944	20	37411	696	37411	-696	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAGGAAAGGGACACTCT	NA	NA	NA	NA	NA	NA	NA	NA	53839911	53816418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836296_53839891
ENSMUSG00000048799.9_53816492_53839966_1	chr18	-	467	5	ISM	ENSMUSG00000048799.9	ENST00000675442.1	3944	20	37356	769	37356	-769	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGTGGGAAGCTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	53839966	53816491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836296_53839891
ENSMUSG00000048799.9_53819055_53842192_1	chr18	-	473	5	ISM	ENSMUSG00000048799.9	ENST00000675442.1	3944	20	35130	3332	35130	-488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGAGCAGATGCGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	53842192	53819054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53819101_53830666_53830766_53836193_53836296_53839891_53840054_53842128
ENSMUSG00000048799.9_53836267_53847990_1	chr18	-	529	5	ISM	ENSMUSG00000048799.9	ENST00000675442.1	3944	20	29332	20544	29332	-17700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCAAGGATCAACAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	53847990	53836266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53836296_53839891_53840054_53842128_53842222_53846453_53846544_53847835
ENSMUSG00000048799.9_53839990_53851535_1	chr18	-	514	6	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	26145	21423	25787	-21423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCCGAAGGGCCAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	53851535	53839989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518
ENSMUSG00000048799.9_53842163_53851598_1	chr18	-	479	5	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	26082	23596	25724	-23596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGAGCAGCAGCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	53851598	53842162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518
ENSMUSG00000048799.9_53842200_53851680_1	chr18	-	524	5	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	26000	23633	25642	-23633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCAAACTTCAGAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	53851680	53842199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518
ENSMUSG00000048799.9_53848100_53854772_1	chr18	-	480	4	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	22908	29533	22550	-29533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATCTTTGTATCGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	53854772	53848099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53848169_53851518_53851702_53852287_53852438_53854694
ENSMUSG00000048799.9_53851619_53856224_1	chr18	-	481	4	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	21456	33052	21098	-33052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTTGTCTTCAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	53856224	53851618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53851702_53852287_53852438_53854694_53854873_53856154
ENSMUSG00000048799.9_53851679_53856276_1	chr18	-	473	4	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	21404	33112	21046	-33112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCACAAGGATAAAATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	53856276	53851678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53851702_53852287_53852438_53854694_53854873_53856154
ENSMUSG00000048799.9_53852383_53857442_1	chr18	-	473	4	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	20238	33816	19880	-33816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTTCGGAAAAACATGGA	NA	NA	NA	NA	NA	NA	NA	NA	53857442	53852382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53852438_53854694_53854873_53856154_53856378_53857425
ENSMUSG00000048799.9_53854783_53857582_1	chr18	-	470	3	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	20098	36216	19740	-36216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGGCGTCACACCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	53857582	53854782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53854873_53856154_53856378_53857425
ENSMUSG00000048799.9_53856208_53860692_1	chr18	-	472	3	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	16988	37641	16630	-37641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGTGGAGAGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	53860692	53856207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53856378_53857425_53857654_53860618
ENSMUSG00000048799.9_53856267_53860750_1	chr18	-	471	3	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	16930	37700	16572	-37700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGCCCCGCCCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	53860750	53856266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53856378_53857425_53857654_53860618
ENSMUSG00000048799.9_53856310_53860809_1	chr18	-	487	3	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	16871	37743	16513	-37743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAAAGGAGAAGACACTCA	NA	NA	NA	NA	NA	NA	NA	NA	53860809	53856309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53856378_53857425_53857654_53860618
ENSMUSG00000048799.9_53857587_53868781_1	chr18	-	481	4	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	8899	39020	8541	-39020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGCAGTACAGAGATTAAC	NA	NA	NA	NA	NA	NA	NA	NA	53868781	53857586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53857654_53860618_53860817_53864162_53864312_53868714
ENSMUSG00000048799.9_53860760_53873150_1	chr18	-	490	5	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	4530	42193	4172	-42193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTACTGGGAAACGATGT	NA	NA	NA	NA	NA	NA	NA	NA	53873150	53860759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123
ENSMUSG00000048799.9_53868758_53876956_1	chr18	-	470	4	ISM	ENSMUSG00000048799.9	ENST00000675442.1	3944	20	366	53035	366	-50191	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGTTATAAAGCAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	53876956	53868757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53868857_53871549_53871665_53873123_53873281_53876857
ENSMUSG00000048799.9_53868798_53877018_1	chr18	-	492	4	ISM	ENSMUSG00000048799.9	ENST00000675442.1	3944	20	304	53075	304	-50231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGCCTCACTTTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	53877018	53868797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53868857_53871549_53871665_53873123_53873281_53876857
ENSMUSG00000048799.9_53873229_53877271_1	chr18	-	466	2	ISM	ENSMUSG00000048799.9	ENST00000675442.1	3944	20	51	57506	51	-54662	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGGGAGCAGCTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	53877271	53873228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_53873281_53876857
ENSMUSG00000048807.3_3857021_3863086_1	chr11	-	1482	2	FSM	ENSMUSG00000048807.3	ENSMUST00000051207.2	3059	2	1578	-1	1578	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTGTCATTCCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	3863086	3857020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_3857985_3862568
ENSMUSG00000048832.10_10683596_10689962_1	chr19	+	407	4	ISM	ENSMUSG00000048832.10	ENSMUST00000235927.2	2690	5	17481	2028	17467	-2023	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCACCTGCGTCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	10683595	10689962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_10683673_10687633_10687806_10688634_10688718_10689887
ENSMUSG00000048833.10_80691693_80726479_1	chr12	+	820	6	FSM	ENSMUSG00000048833.10	ENST00000557046.1	858	6	38	0	38	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCAGGTTCCAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	80691692	80726479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80722622_80722709_80723905_80724041_80726248
ENSMUSG00000048833.10_80691693_80726479_2	chr12	+	815	6	NNC	ENSMUSG00000048833.10	novel	858	6	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCAGGTTCCAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	80691692	80726479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_80691751_80709243_80709353_80713308_80713510_80722622_80722709_80723905_80724036_80726248
ENSMUSG00000048833.10_80691693_80726479_3	chr12	+	814	6	NNC	ENSMUSG00000048833.10	novel	858	6	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCAGGTTCCAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	80691692	80726479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_80691751_80709243_80709353_80713308_80713504_80722622_80722709_80723905_80724041_80726248
ENSMUSG00000048833.10_80691693_80726479_4	chr12	+	813	6	NNC	ENSMUSG00000048833.10	novel	858	6	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCAGGTTCCAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	80691692	80726479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_80691751_80709243_80709353_80713308_80713510_80722622_80722709_80723912_80724041_80726248
ENSMUSG00000048833.10_80691693_80726479_5	chr12	+	815	6	NNC	ENSMUSG00000048833.10	novel	858	6	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCAGGTTCCAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	80691692	80726479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_80691751_80709243_80709353_80713308_80713510_80722622_80722709_80723905_80724041_80726253
ENSMUSG00000048834.17_16207724_16232826_1	chr11	+	1782	5	FSM	ENSMUSG00000048834.17	ENST00000402613.4	2817	5	32	1003	0	-1003	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTCATTTGTACCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	16207723	16232826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_16208087_16209854_16210022_16211437_16211489_16212913_16213251_16231962
ENSMUSG00000048834.17_16208063_16233197_1	chr11	+	1814	5	FSM	ENSMUSG00000048834.17	ENST00000402613.4	2817	5	371	632	260	-632	multi-exon	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATGTTGCTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	16208062	16233197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_16208087_16209854_16210022_16211437_16211489_16212913_16213251_16231962
ENSMUSG00000048834.17_16209942_16233327_1	chr11	+	1833	4	ISM	ENSMUSG00000048834.17	ENST00000402613.4	2817	5	2250	502	2139	-502	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACTGCAAAGCCCATACT	NA	NA	NA	NA	NA	NA	NA	NA	16209941	16233327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16210022_16211437_16211489_16212913_16213251_16231962
ENSMUSG00000048834.17_16212942_16233468_1	chr11	+	1815	2	ISM	ENSMUSG00000048834.17	ENST00000402613.4	2817	5	5250	361	5139	-361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATAGAACAATCAATACAT	NA	NA	NA	NA	NA	NA	NA	NA	16212941	16233468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_16213251_16231962
ENSMUSG00000048856.10_108820141_108822741_1	chr12	+	1386	3	ISM	ENSMUSG00000048856.10	ENSMUST00000057026.10	1580	6	3086	0	3076	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGCTCTGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	108820140	108822741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108820325_108821219_108821545_108821864
ENSMUSG00000048865.17_171216788_171231679_1	chr1	+	428	4	ISM	ENSMUSG00000048865.17	ENST00000368015.1	3320	8	289	5468	266	-5468	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCGCTGAGGGTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	171216787	171231679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171216840_171230780_171230913_171231357_171231524_171231601
ENSMUSG00000048865.17_171231469_171232535_1	chr1	+	395	4	ISM	ENSMUSG00000048865.17	ENST00000368015.1	3320	8	14970	4612	14947	-4612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGGGCCTTAGGTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	171231468	171232535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171231524_171231601_171231706_171231788_171231867_171232377
ENSMUSG00000048865.17_171234958_171235460_1	chr1	+	411	2	ISM	ENSMUSG00000048865.17	ENST00000368015.1	3320	8	18459	1687	18436	-1687	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTCTGGGGCCTAAACC	NA	NA	NA	NA	NA	NA	NA	NA	171234957	171235460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171235204_171235295
ENSMUSG00000048915.13_62912894_62920355_1	chr17	-	1610	2	ISM	ENSMUSG00000048915.13	ENSMUST00000076840.12	4032	5	267957	1715	267784	1420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGAAAAAGTGGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	62920355	62912893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_62914459_62920310
ENSMUSG00000048915.13_62913001_62920897_1	chr17	-	1605	3	ISM	ENSMUSG00000048915.13	ENSMUST00000076840.12	4032	5	267415	1822	267242	1313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACTTTGACAAAATATT	NA	NA	NA	NA	NA	NA	NA	NA	62920897	62913000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_62914459_62920310_62920392_62920831
ENSMUSG00000048915.13_62913350_62958129_1	chr17	-	1549	4	ISM	ENSMUSG00000048915.13	ENSMUST00000076840.12	4032	5	230183	2171	230010	964	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTACTCCTCTGGGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	62958129	62913349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_62914459_62920310_62920392_62920831_62920898_62957836
ENSMUSG00000048915.13_62913466_62958129_1	chr17	-	1433	4	ISM	ENSMUSG00000048915.13	ENSMUST00000076840.12	4032	5	230183	2287	230010	848	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGCTACAACTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	62958129	62913465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_62914459_62920310_62920392_62920831_62920898_62957836
ENSMUSG00000048920.9_16545209_16549032_1	chr7	-	737	2	ISM	ENSMUSG00000048920.9	ENSMUST00000061390.9	2827	3	1625	2038	1625	-2038	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCACCAGCCTCTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	16549032	16545208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_16545902_16548988
ENSMUSG00000048922.19_67914613_67917661_1	chr14	-	910	2	ISM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	35398	809	35398	-809	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTGTCTCCAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	67917661	67914612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67915472_67917610
ENSMUSG00000048922.19_67914679_67917751_1	chr14	-	934	2	ISM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	35308	875	35308	-875	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAGCAGTAAAACCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	67917751	67914678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67915472_67917610
ENSMUSG00000048922.19_67915089_67935473_1	chr14	-	929	6	ISM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	17586	1285	17586	-1285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGGAAAATCCTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	67935473	67915088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387
ENSMUSG00000048922.19_67915394_67937721_1	chr14	-	934	8	ISM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	15338	1590	15338	-1590	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGCAGATTCGCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	67937721	67915393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631
ENSMUSG00000048922.19_67931126_67943144_1	chr14	-	923	8	ISM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	9915	17322	9915	-17322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTCGAGAAAAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	67943144	67931125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079
ENSMUSG00000048922.19_67931150_67943246_1	chr14	-	1001	8	ISM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	9813	17346	9813	-17346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTAAAGAGAAGATGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	67943246	67931149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079
ENSMUSG00000048922.19_67934115_67944925_1	chr14	-	986	7	ISM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	8134	20311	8134	-20311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATTTGTGTTTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	67944925	67934114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801
ENSMUSG00000048922.19_67935518_67950661_1	chr14	-	928	7	ISM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	2398	21714	2398	-21714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAATACTCCATTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	67950661	67935517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536
ENSMUSG00000048922.19_67936147_67952236_1	chr14	-	951	7	ISM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	823	22343	823	-22343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGCAGGTATGTTACTC	NA	NA	NA	NA	NA	NA	NA	NA	67952236	67936146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131
ENSMUSG00000048922.19_67943128_67952939_1	chr14	-	927	6	ISM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	120	29324	120	-29324	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGACGAAGCGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	67952939	67943127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ENSMUSG00000048922.19_67943190_67953059_1	chr14	-	985	6	ISM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	0	29386	0	-29386	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGCGGAGGAGAATATCC	NA	NA	NA	NA	NA	NA	NA	NA	67953059	67943189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ENSMUSG00000048930.13_113347937_113349510_1	chr6	-	262	3	ISM	ENSMUSG00000048930.13	ENSMUST00000043333.9	1708	10	4827	4321	4827	-4321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGCACCTCCCCGCGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	113349510	113347936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113348010_113349238_113349343_113349425
ENSMUSG00000048930.13_113351761_113352172_1	chr6	-	288	2	ISM	ENSMUSG00000048930.13	ENSMUST00000043333.9	1708	10	2165	8145	2165	-8145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAGCTGAACATTATAA	NA	NA	NA	NA	NA	NA	NA	NA	113352172	113351760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113351846_113351969
ENSMUSG00000048949.9_102207569_102208455_1	chrX	-	787	2	NNC	ENSMUSG00000048949.9	novel	2198	2	NA	NA	557	-849	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATGGCACAGTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	102208455	102207568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_102208069_102208168
ENSMUSG00000048949.9_102207569_102208455_2	chrX	-	792	2	FSM	ENSMUSG00000048949.9	ENST00000579008.1	2198	2	557	849	557	-849	multi-exon	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATGGCACAGTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	102208455	102207568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_102208069_102208163
ENSMUSG00000048949.9_102207818_102208711_1	chrX	-	799	2	FSM	ENSMUSG00000048949.9	ENST00000579008.1	2198	2	301	1098	301	-1098	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTAGAGCAGTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	102208711	102207817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_102208069_102208163
ENSMUSG00000048949.9_102207818_102208711_3	chrX	-	794	2	NNC	ENSMUSG00000048949.9	novel	2198	2	NA	NA	301	-1098	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTAGAGCAGTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	102208711	102207817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_102208069_102208168
ENSMUSG00000048997.18_108109675_108110618_1	chr3	-	159	2	ISM	ENSMUSG00000048997.18	ENST00000459635.2	2540	11	7218	137	7160	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAAAGTGCCTGCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	108110618	108109674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108109690_108110474
ENSMUSG00000049044.17_71861406_72005201_1	chr2	+	550	6	ISM	ENSMUSG00000049044.17	ENST00000409036.5	3942	27	49792	82615	-23542	-81519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAGCTCCCCACATGATAA	NA	NA	NA	NA	NA	NA	NA	NA	71861405	72005201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_71861520_71864374_71864464_71875445_71875593_71967585_71967676_72004766_72004821_72005145
ENSMUSG00000049044.17_71864408_72008596_1	chr2	+	529	6	ISM	ENSMUSG00000049044.17	ENST00000409036.5	3942	27	52794	79220	-20540	-78124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGCATGTGGCAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	71864407	72008596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_71864464_71875445_71875593_71967585_71967676_72004766_72004821_72005145_72005253_72008521
ENSMUSG00000049044.17_71875446_72010282_1	chr2	+	539	6	ISM	ENSMUSG00000049044.17	ENST00000409036.5	3942	27	63832	77534	-9502	-76438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGACAAATATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	71875445	72010282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_71875593_71967585_71967676_72004766_72004821_72005145_72005253_72008521_72008644_72010263
ENSMUSG00000049044.17_71875491_72010339_1	chr2	+	551	6	ISM	ENSMUSG00000049044.17	ENST00000409036.5	3942	27	63877	77477	-9457	-76381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTACTGAGGAAGAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	71875490	72010339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_71875593_71967585_71967676_72004766_72004821_72005145_72005253_72008521_72008644_72010263
ENSMUSG00000049044.17_71875548_72010387_1	chr2	+	542	6	ISM	ENSMUSG00000049044.17	ENST00000409036.5	3942	27	63934	77429	-9400	-76333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTGCTGCTCTCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	71875547	72010387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_71875593_71967585_71967676_72004766_72004821_72005145_72005253_72008521_72008644_72010263
ENSMUSG00000049044.17_71922887_72053421_1	chr2	+	1317	13	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	159	34387	159	-33299	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGCGGGTCATCCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	71922886	72053421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_71922986_71967585_71967676_72005145_72005253_72008521_72008644_72010263_72010448_72025980_72026066_72026559_72026621_72028680_72028758_72029102_72029250_72031391_72031508_72035998_72036088_72038429_72038509_72053360
ENSMUSG00000049044.17_72008520_72056857_1	chr2	+	1351	14	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	85792	30951	85792	-29863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCGTGTGCCGGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	72008519	72056857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72008644_72010263_72010448_72025980_72026066_72026559_72026621_72028680_72028758_72029102_72029250_72031391_72031508_72035998_72036088_72038429_72038509_72053360_72053512_72055304_72055394_72056092_72056124_72056342_72056422_72056818
ENSMUSG00000049044.17_72008520_72056857_2	chr2	+	1350	14	NNC	ENSMUSG00000049044.17	novel	3881	26	NA	NA	85792	-29863	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCGTGTGCCGGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	72008519	72056857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_72008644_72010263_72010448_72025980_72026066_72026559_72026621_72028680_72028758_72029102_72029250_72031391_72031508_72035998_72036088_72038429_72038501_72053353_72053512_72055304_72055394_72056092_72056124_72056342_72056422_72056818
ENSMUSG00000049044.17_72010324_72059420_1	chr2	+	1346	14	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	87596	28388	87596	-27300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCGAGAGAGCAATTCGA	NA	NA	NA	NA	NA	NA	NA	NA	72010323	72059420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72010448_72025980_72026066_72026559_72026621_72028680_72028758_72029102_72029250_72031391_72031508_72035998_72036088_72038429_72038509_72053360_72053512_72055304_72055394_72056092_72056124_72056342_72056422_72056818_72056966_72059349
ENSMUSG00000049044.17_72010364_72059408_1	chr2	+	1293	14	NNC	ENSMUSG00000049044.17	novel	3881	26	NA	NA	87636	-27312	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGTTTGCCTGCCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	72010363	72059408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_72010448_72025980_72026066_72026559_72026621_72028680_72028758_72029102_72029250_72031391_72031508_72035998_72036088_72038429_72038501_72053353_72053512_72055304_72055394_72056092_72056124_72056342_72056422_72056818_72056966_72059349
ENSMUSG00000049044.17_72025981_72064546_1	chr2	+	1375	14	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	103253	23262	103253	-22174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACGCCCAGCAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	72025980	72064546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72026066_72026559_72026621_72028680_72028758_72029102_72029250_72031391_72031508_72035998_72036088_72038429_72038509_72053360_72053512_72055304_72055394_72056092_72056124_72056342_72056422_72056818_72056966_72059349_72059448_72064420
ENSMUSG00000049044.17_72025981_72064546_2	chr2	+	1374	14	NNC	ENSMUSG00000049044.17	novel	3881	26	NA	NA	103253	-22174	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACGCCCAGCAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	72025980	72064546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_72026066_72026559_72026621_72028680_72028758_72029102_72029250_72031391_72031508_72035998_72036088_72038429_72038501_72053353_72053512_72055304_72055394_72056092_72056124_72056342_72056422_72056818_72056966_72059349_72059448_72064420
ENSMUSG00000049044.17_72029143_72069444_1	chr2	+	1327	13	NNC	ENSMUSG00000049044.17	novel	3881	26	NA	NA	106415	-17276	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGTCATGGGACTCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	72029142	72069444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_72029250_72031391_72031508_72035998_72036088_72038429_72038501_72053353_72053512_72055304_72055394_72056092_72056124_72056342_72056422_72056818_72056966_72059349_72059448_72064420_72064547_72064951_72065131_72069407
ENSMUSG00000049044.17_72029143_72069453_1	chr2	+	1337	13	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	106415	18355	106415	-17267	internal_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTCAGCAACGTGGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	72029142	72069453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72029250_72031391_72031508_72035998_72036088_72038429_72038509_72053360_72053512_72055304_72055394_72056092_72056124_72056342_72056422_72056818_72056966_72059349_72059448_72064420_72064547_72064951_72065131_72069407
ENSMUSG00000049044.17_72035999_72073136_1	chr2	+	1363	14	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	113271	14672	113271	-13584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTGCAGTATTATAACC	NA	NA	NA	NA	NA	NA	NA	NA	72035998	72073136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72036088_72038429_72038509_72053360_72053512_72055304_72055394_72056092_72056124_72056342_72056422_72056818_72056966_72059349_72059448_72064420_72064547_72064951_72065131_72069407_72069499_72071770_72071822_72072577_72072666_72073071
ENSMUSG00000049044.17_72038427_72083338_1	chr2	+	1332	14	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	115699	4470	115699	-3382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTCTGAGTTACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	72038426	72083338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72038509_72053360_72053512_72055304_72055394_72056092_72056124_72056342_72056422_72056818_72056966_72059349_72059448_72064420_72064547_72064951_72065131_72069407_72069499_72071770_72071822_72072577_72072666_72073071_72073137_72083283
ENSMUSG00000049044.17_72053361_72086720_1	chr2	+	1378	14	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	130633	1088	130633	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGAAGTGCCCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	72053360	72086720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72053512_72055304_72055394_72056092_72056124_72056342_72056422_72056818_72056966_72059349_72059448_72064420_72064547_72064951_72065131_72069407_72069499_72071770_72071822_72072577_72072666_72073071_72073137_72083283_72083339_72086592
ENSMUSG00000049044.17_72056093_72086885_1	chr2	+	1303	12	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	133365	923	133365	165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGCGATCTGACTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	72056092	72086885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72056124_72056342_72056422_72056818_72056966_72059349_72059448_72064420_72064547_72064951_72065131_72069407_72069499_72071770_72071822_72072577_72072666_72073071_72073137_72083283_72083339_72086592
ENSMUSG00000049044.17_72056341_72086999_1	chr2	+	1388	11	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	133613	809	133613	279	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCGGGAGGCTACATCAG	NA	NA	NA	NA	NA	NA	NA	NA	72056340	72086999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72056422_72056818_72056966_72059349_72059448_72064420_72064547_72064951_72065131_72069407_72069499_72071770_72071822_72072577_72072666_72073071_72073137_72083283_72083339_72086592
ENSMUSG00000049044.17_72059347_72087100_1	chr2	+	1264	9	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	136619	708	136619	380	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATAATTGAATGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	72059346	72087100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72059448_72064420_72064547_72064951_72065131_72069407_72069499_72071770_72071822_72072577_72072666_72073071_72073137_72083283_72083339_72086592
ENSMUSG00000049044.17_72059385_72087165_1	chr2	+	1291	9	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	136657	643	136657	445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGATACCGTAAAAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	72059384	72087165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72059448_72064420_72064547_72064951_72065131_72069407_72069499_72071770_72071822_72072577_72072666_72073071_72073137_72083283_72083339_72086592
ENSMUSG00000049044.17_72059416_72086720_1	chr2	+	611	6	ISM	ENSMUSG00000049044.17	ENST00000409036.5	3942	27	247802	1096	136688	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGAAGTGCCCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	72059415	72086720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72059448_72064420_72064547_72064951_72065131_72069407_72069499_72083283_72083339_72086592
ENSMUSG00000049044.17_72064457_72087274_1	chr2	+	1301	8	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	141729	534	141729	-534	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTAATTTCGGAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	72064456	72087274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72064547_72064951_72065131_72069407_72069499_72071770_72071822_72072577_72072666_72073071_72073137_72083283_72083339_72086592
ENSMUSG00000049044.17_72064512_72087327_1	chr2	+	1299	8	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	141784	481	141784	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAACAAATCAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	72064511	72087327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72064547_72064951_72065131_72069407_72069499_72071770_72071822_72072577_72072666_72073071_72073137_72083283_72083339_72086592
ENSMUSG00000049044.17_72065046_72087462_1	chr2	+	1305	7	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	142318	346	142318	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTCCTGGGCATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	72065045	72087462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72065131_72069407_72069499_72071770_72071822_72072577_72072666_72073071_72073137_72083283_72083339_72086592
ENSMUSG00000049044.17_72069442_72087564_1	chr2	+	1288	6	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	146714	244	146714	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCAATTGTTTTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	72069441	72087564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72069499_72071770_72071822_72072577_72072666_72073071_72073137_72083283_72083339_72086592
ENSMUSG00000049044.17_72069469_72087643_1	chr2	+	1340	6	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	146741	165	146741	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAGACATTGTGCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	72069468	72087643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72069499_72071770_72071822_72072577_72072666_72073071_72073137_72083283_72083339_72086592
ENSMUSG00000049044.17_72072638_72087816_1	chr2	+	1372	4	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	149910	-8	149910	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTATTGTTAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	72072637	72087816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72072666_72073071_72073137_72083283_72083339_72086592
ENSMUSG00000049047.12_133657356_133660855_1	chrX	+	1996	5	FSM	ENSMUSG00000049047.12	ENSMUST00000081834.10	3327	5	12	1319	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTAGTCTGTCTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	133657355	133660855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_133657480_133658012_133658092_133658480_133658543_133658825_133658896_133659194
ENSMUSG00000049047.12_133658066_133661156_1	chrX	+	2120	4	ISM	ENSMUSG00000049047.12	ENSMUST00000086880.11	2024	5	710	-301	670	301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTATGGTAGTCAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	133658065	133661156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_133658092_133658480_133658543_133658825_133658896_133659194
ENSMUSG00000049076.13_30914348_30926964_1	chr16	-	1601	7	ISM	ENSMUSG00000049076.13	ENSMUST00000230614.2	3414	23	93016	114	92845	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTTGTTACTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	30926964	30914347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844
ENSMUSG00000049076.13_30914493_30929380_1	chr16	-	1651	9	ISM	ENSMUSG00000049076.13	ENSMUST00000230614.2	3414	23	90600	259	90429	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGACAGATCGTCACTATA	NA	NA	NA	NA	NA	NA	NA	NA	30929380	30914492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318
ENSMUSG00000049090.4_84106188_84113561_1	chr18	+	1338	2	FSM	ENSMUSG00000049090.4	ENSMUST00000060223.4	3430	2	0	2092	0	-652	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTTTCCTTGGGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	84106187	84113561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_84106499_84112534
ENSMUSG00000049106.8_80423343_80445617_1	chr12	-	368	3	ISM	ENSMUSG00000049106.8	ENST00000554215.5	4650	9	37143	39887	37143	-39887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAACTCATGCACTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	80445617	80423342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80423506_80444426_80444557_80445542
ENSMUSG00000049106.8_80445609_80482710_1	chr12	-	400	4	ISM	ENSMUSG00000049106.8	ENST00000554215.5	4650	9	50	62153	50	-62153	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCCAGCTCTTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	80482710	80445608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_80445683_80446722_80446760_80451328_80451473_80482565
ENSMUSG00000049109.16_28598485_28658399_1	chr10	+	1320	3	ISM	ENSMUSG00000049109.16	ENSMUST00000060409.13	2278	5	54129	7517	16	-7517	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAGGACTTCAGTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	28598484	28658399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_28598633_28637150_28637610_28657686
ENSMUSG00000049109.16_28598531_28658454_1	chr10	+	1329	3	ISM	ENSMUSG00000049109.16	ENSMUST00000060409.13	2278	5	54175	7462	62	-7462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGCAAATCCTGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	28598530	28658454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_28598633_28637150_28637610_28657686
ENSMUSG00000049109.16_28598579_28658507_1	chr10	+	1334	3	ISM	ENSMUSG00000049109.16	ENSMUST00000060409.13	2278	5	54223	7409	110	-7409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTTCGACTAGTTAATGG	NA	NA	NA	NA	NA	NA	NA	NA	28598578	28658507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_28598633_28637150_28637610_28657686
ENSMUSG00000049109.16_28637471_28757046_1	chr10	+	1426	4	ISM	ENSMUSG00000049109.16	ENST00000368248.4	2824	5	39002	914	39002	-914	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCTGAAAAACAGCAATTC	NA	NA	NA	NA	NA	NA	NA	NA	28637470	28757046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_28637610_28657686_28658739_28739295_28739431_28756946
ENSMUSG00000049109.16_28637578_28757127_1	chr10	+	1400	4	ISM	ENSMUSG00000049109.16	ENST00000368248.4	2824	5	39109	833	39109	-833	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATCATATAGAGCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	28637577	28757127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_28637610_28657686_28658739_28739295_28739431_28756946
ENSMUSG00000049109.16_28658148_28757549_1	chr10	+	1329	3	ISM	ENSMUSG00000049109.16	ENST00000368248.4	2824	5	59679	411	59679	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACTCCCAACAACTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	28658147	28757549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_28658739_28739295_28739431_28756946
ENSMUSG00000049109.16_28658211_28757606_1	chr10	+	1331	3	NNC	ENSMUSG00000049109.16	novel	2824	5	NA	NA	59742	-354	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACTTCTAAAAGGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	28658210	28757606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_28658739_28739295_28739439_28756946
ENSMUSG00000049109.16_28658260_28757666_1	chr10	+	1342	3	NNC	ENSMUSG00000049109.16	novel	2824	5	NA	NA	59791	-294	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTTTATATACTATATT	NA	NA	NA	NA	NA	NA	NA	NA	28658259	28757666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_28658739_28739295_28739439_28756946
ENSMUSG00000049109.16_28658330_28757744_1	chr10	+	1339	3	NNC	ENSMUSG00000049109.16	novel	2824	5	NA	NA	59861	-216	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	414	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATATTTGATGAGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	28658329	28757744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_28658739_28739295_28739428_28756946
ENSMUSG00000049109.16_28658388_28757804_1	chr10	+	1341	3	NNC	ENSMUSG00000049109.16	novel	2824	5	NA	NA	59919	-156	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	454	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGCCAAAGAGATTATT	NA	NA	NA	NA	NA	NA	NA	NA	28658387	28757804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_28658739_28739295_28739428_28756946
ENSMUSG00000049109.16_28658535_28757960_1	chr10	+	1361	3	NNC	ENSMUSG00000049109.16	novel	2824	5	NA	NA	60066	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATTTTTCAAGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	28658534	28757960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_28658739_28739295_28739439_28756946
ENSMUSG00000049109.16_28658557_28757949_1	chr10	+	1320	3	ISM	ENSMUSG00000049109.16	ENST00000368248.4	2824	5	60088	11	60088	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGAAGAGACTGAGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	28658556	28757949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_28658739_28739295_28739431_28756946
ENSMUSG00000049119.15_5644235_5799427_1	chr4	+	1422	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	114	1674	114	-519	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCTGGAAAACCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	5644234	5799427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_5644411_5729570_5729658_5798268
ENSMUSG00000049122.18_73992324_74105576_1	chr4	+	1032	13	ISM	ENSMUSG00000049122.18	ENST00000304195.8	2639	14	45	4964	45	-2589	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGCCCCTAATTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	73992323	74105576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_73992387_74016338_74016382_74038035_74038115_74046435_74046534_74054064_74054189_74063270_74063359_74071803_74071893_74077480_74077545_74078603_74078693_74079935_74080011_74080285_74080355_74088874_74089000_74105550
ENSMUSG00000049122.18_74054138_74105940_1	chr4	+	1040	9	ISM	ENSMUSG00000049122.18	ENST00000304195.8	2639	14	61859	4600	61859	-2225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTGGTGGGCCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	74054137	74105940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_74054189_74063270_74063359_74071803_74071893_74077480_74077545_74078603_74078693_74079935_74080011_74080285_74080355_74088874_74089000_74105550
ENSMUSG00000049122.18_74071802_74106106_1	chr4	+	1069	7	ISM	ENSMUSG00000049122.18	ENST00000304195.8	2639	14	79523	4434	79523	-2059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAACATCGTCCTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	74071801	74106106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_74071893_74077480_74077545_74078603_74078693_74079935_74080011_74080285_74080355_74088874_74089000_74105550
ENSMUSG00000049122.18_74079948_74106318_1	chr4	+	1025	4	ISM	ENSMUSG00000049122.18	ENST00000304195.8	2639	14	87669	4222	87669	-1847	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCGATTTAAATCAAATACA	NA	NA	NA	NA	NA	NA	NA	NA	74079947	74106318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_74080011_74080285_74080355_74088874_74089000_74105550
ENSMUSG00000049122.18_74088967_74106530_1	chr4	+	1013	2	ISM	ENSMUSG00000049122.18	ENST00000304195.8	2639	14	96688	4010	96688	-1635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCCTATACAAATAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	74088966	74106530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_74089000_74105550
ENSMUSG00000049133.8_93104585_93109573_1	chr3	+	1678	3	FSM	ENSMUSG00000049133.8	ENST00000388718.5	2668	3	0	990	0	-990	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATCATGGATCTGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	93104584	93109573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_93104636_93107489_93107655_93108111
ENSMUSG00000049134.16_56308558_56323506_1	chr19	-	1087	8	ISM	ENSMUSG00000049134.16	ENSMUST00000166203.2	5079	41	54803	-69	54803	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAGTGTTTTAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	56323506	56308557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56308735_56309316_56309449_56310154_56310467_56312319_56312428_56315626_56315732_56316932_56317032_56317427_56317533_56323457
ENSMUSG00000049134.16_56308627_56323584_1	chr19	-	1096	8	ISM	ENSMUSG00000049134.16	ENSMUST00000166203.2	5079	41	54725	0	54725	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCTTAAGAAGCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	56323584	56308626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56308735_56309316_56309449_56310154_56310467_56312319_56312428_56315626_56315732_56316932_56317032_56317427_56317533_56323457
ENSMUSG00000049134.16_56308627_56323631_1	chr19	-	1143	8	ISM	ENSMUSG00000049134.16	ENSMUST00000166203.2	5079	41	54678	0	54678	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCTTAAGAAGCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	56323631	56308626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56308735_56309316_56309449_56310154_56310467_56312319_56312428_56315626_56315732_56316932_56317032_56317427_56317533_56323457
ENSMUSG00000049134.16_56309433_56323769_1	chr19	-	1057	7	ISM	ENSMUSG00000049134.16	ENSMUST00000166203.2	5079	41	54540	806	54540	-806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAACCTGACTCGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	56323769	56309432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56309449_56310154_56310467_56312319_56312428_56315626_56315732_56316932_56317032_56317427_56317533_56323457
ENSMUSG00000049134.16_56312320_56329055_1	chr19	-	1146	9	ISM	ENSMUSG00000049134.16	ENSMUST00000166203.2	5079	41	49254	3693	49254	-3693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTCCAAACCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	56329055	56312319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56312428_56315626_56315732_56316932_56317032_56317427_56317533_56323457_56323770_56324474_56324583_56324913_56325019_56326468_56326568_56328950
ENSMUSG00000049134.16_56323458_56333122_1	chr19	-	1071	8	ISM	ENSMUSG00000049134.16	ENSMUST00000166203.2	5079	41	45187	14831	45187	-14831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGATCTACTGTGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	56333122	56323457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56323770_56324474_56324583_56324913_56325019_56326468_56326568_56328950_56329056_56330570_56330769_56332443_56332558_56333092
ENSMUSG00000049134.16_56324527_56338800_1	chr19	-	1069	10	ISM	ENSMUSG00000049134.16	ENSMUST00000166203.2	5079	41	39509	15900	39509	-15900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGCCCTCCCCTTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	56338800	56324526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56324583_56324913_56325019_56326468_56326568_56328950_56329056_56330570_56330769_56332443_56332558_56333092_56333201_56333891_56333997_56335560_56335660_56338720
ENSMUSG00000049134.16_56329037_56340175_1	chr19	-	1060	8	ISM	ENSMUSG00000049134.16	ENSMUST00000166203.2	5079	41	38134	20410	38134	-20410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTCATGCGTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	56340175	56329036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56329056_56330570_56330769_56332443_56332558_56333092_56333201_56333891_56333997_56335560_56335660_56338720_56338826_56339863
ENSMUSG00000049134.16_56333127_56349608_1	chr19	-	1072	9	ISM	ENSMUSG00000049134.16	ENSMUST00000166203.2	5079	41	28701	24500	28701	-24500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGCAAAGGCGTCCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	56349608	56333126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56333201_56333891_56333997_56335560_56335660_56338720_56338826_56339863_56340176_56342551_56342660_56343913_56344019_56345722_56345822_56349543
ENSMUSG00000049134.16_56339945_56352802_1	chr19	-	1041	8	ISM	ENSMUSG00000049134.16	ENST00000369360.7	5465	41	25647	31537	25507	-31318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCGTCTCACTGCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	56352802	56339944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56340176_56342551_56342660_56343913_56344019_56345722_56345822_56349543_56349649_56350085_56350284_56352357_56352480_56352729
ENSMUSG00000049134.16_56340050_56353882_1	chr19	-	1034	9	ISM	ENSMUSG00000049134.16	ENST00000369360.7	5465	41	24567	31642	24427	-31423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGCTTTGAAGACACCAG	NA	NA	NA	NA	NA	NA	NA	NA	56353882	56340049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56340176_56342551_56342660_56343913_56344019_56345722_56345822_56349543_56349649_56350085_56350284_56352357_56352480_56352729_56352842_56353823
ENSMUSG00000049134.16_56342548_56354905_1	chr19	-	1057	9	ISM	ENSMUSG00000049134.16	ENST00000369360.7	5465	41	23544	34140	23404	-33921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTCGGGCACCAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	56354905	56342547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56342660_56343913_56344019_56345722_56345822_56349543_56349649_56350085_56350284_56352357_56352480_56352729_56352842_56353823_56353929_56354806
ENSMUSG00000049134.16_56343961_56361285_1	chr19	-	1050	10	ISM	ENSMUSG00000049134.16	ENST00000369360.7	5465	41	17164	35553	17024	-35334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTCTTCTTACGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	56361285	56343960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56344019_56345722_56345822_56349543_56349649_56350085_56350284_56352357_56352480_56352729_56352842_56353823_56353929_56354806_56354906_56360254_56360360_56361238
ENSMUSG00000049134.16_56345756_56366528_1	chr19	-	1062	10	ISM	ENSMUSG00000049134.16	ENST00000369360.7	5465	41	11921	37348	11781	-37129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCCAAGAAGAGCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	56366528	56345755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56345822_56349543_56349649_56350085_56350284_56352357_56352480_56352729_56352842_56353823_56353929_56354806_56354906_56360254_56360360_56361238_56361347_56366486
ENSMUSG00000049134.16_56349589_56367511_1	chr19	-	1046	10	ISM	ENSMUSG00000049134.16	ENST00000369360.7	5465	41	10938	41181	10798	-40962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAACCTGGAACAGGCGAA	NA	NA	NA	NA	NA	NA	NA	NA	56367511	56349588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56349649_56350085_56350284_56352357_56352480_56352729_56352842_56353823_56353929_56354806_56354906_56360254_56360360_56361238_56361347_56366486_56366604_56367491
ENSMUSG00000049134.16_56350171_56368321_1	chr19	-	1060	10	ISM	ENSMUSG00000049134.16	ENST00000369360.7	5465	41	10128	41763	9988	-41544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAGAAACTGCATGACT	NA	NA	NA	NA	NA	NA	NA	NA	56368321	56350170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56350284_56352357_56352480_56352729_56352842_56353823_56353929_56354806_56354906_56360254_56360360_56361238_56361347_56366486_56366604_56367491_56367597_56368247
ENSMUSG00000049134.16_56352377_56368722_1	chr19	-	1041	10	ISM	ENSMUSG00000049134.16	ENST00000369360.7	5465	41	9727	43969	9587	-43750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGATGAGCAGCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	56368722	56352376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56352480_56352729_56352842_56353823_56353929_56354806_56354906_56360254_56360360_56361238_56361347_56366486_56366604_56367491_56367597_56368247_56368350_56368637
ENSMUSG00000049134.16_56352694_56370036_1	chr19	-	1102	10	ISM	ENSMUSG00000049134.16	ENSMUST00000095947.11	5214	40	8431	44136	8273	-44067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACAGCTGCAATGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	56370036	56352693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56352842_56353823_56353929_56354806_56354906_56360254_56360360_56361238_56361347_56366486_56366604_56367491_56367597_56368247_56368350_56368637_56368746_56369931
ENSMUSG00000049134.16_56352807_56370739_1	chr19	-	1037	11	ISM	ENSMUSG00000049134.16	ENSMUST00000095947.11	5214	40	7728	44249	7570	-44180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGCTTTGAGATGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	56370739	56352806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56352842_56353823_56353929_56354806_56354906_56360254_56360360_56361238_56361347_56366486_56366604_56367491_56367597_56368247_56368350_56368637_56368746_56369931_56370037_56370691
ENSMUSG00000049134.16_56353884_56372533_1	chr19	-	1042	11	ISM	ENSMUSG00000049134.16	ENSMUST00000095947.11	5214	40	5934	45326	5776	-45257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCAGGACGCCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	56372533	56353883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56353929_56354806_56354906_56360254_56360360_56361238_56361347_56366486_56366604_56367491_56367597_56368247_56368350_56368637_56368746_56369931_56370037_56370691_56370797_56372490
ENSMUSG00000049134.16_56360269_56374515_1	chr19	-	1045	10	ISM	ENSMUSG00000049134.16	ENSMUST00000095947.11	5214	40	3952	51711	3794	-51642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCCTGAAGGATGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	56374515	56360268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56360360_56361238_56361347_56366486_56366604_56367491_56367597_56368247_56368350_56368637_56368746_56369931_56370037_56370691_56370797_56372490_56372596_56374416
ENSMUSG00000049134.16_56361291_56377893_1	chr19	-	1062	11	ISM	ENSMUSG00000049134.16	ENSMUST00000040711.15	5334	41	574	52758	416	-52664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGACAGACGCATGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	56377893	56361290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56361347_56366486_56366604_56367491_56367597_56368247_56368350_56368637_56368746_56369931_56370037_56370691_56370797_56372490_56372596_56374416_56374516_56377180_56377269_56377821
ENSMUSG00000049134.16_56367488_56378443_1	chr19	-	1122	10	ISM	ENSMUSG00000049134.16	ENSMUST00000040711.15	5334	41	24	58955	0	-58861	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGCAGAGCCACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	56378443	56367487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_56367597_56368247_56368350_56368637_56368746_56369931_56370037_56370691_56370797_56372490_56372596_56374416_56374516_56377180_56377269_56377821_56377917_56378237
ENSMUSG00000049225.15_11958596_11966420_1	chr4	-	3757	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108297.3	4201	2	32	412	0	-412	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTTGTCATATTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	11966420	11958595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_11962234_11966301
ENSMUSG00000049232.4_59186105_59187088_1	chr6	+	827	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	250	1930	250	-1930	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTCAAATCTAAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	59186104	59187088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_59186167_59186323
ENSMUSG00000049252.18_40486492_40491607_1	chr2	-	930	4	ISM	ENSMUSG00000049252.18	ENST00000389484.8	15286	89	1359183	1236	25741	-946	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTCAGACTTGGCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	40491607	40486491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40487087_40488424_40488524_40490265_40490411_40491516
ENSMUSG00000049252.18_40486945_40537204_1	chr2	-	940	8	ISM	ENSMUSG00000049252.18	ENST00000389484.8	15286	89	1313586	1689	-19856	-1399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGACACTTTTCTATGCT	NA	NA	NA	NA	NA	NA	NA	NA	40537204	40486944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40487087_40488424_40488524_40490265_40490411_40491516_40491608_40501443_40501521_40519618_40519724_40527717_40527893_40537098
ENSMUSG00000049252.18_40486996_40537260_1	chr2	-	945	8	ISM	ENSMUSG00000049252.18	ENST00000389484.8	15286	89	1313530	1740	-19912	-1450	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTCTTCCAAAGAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	40537260	40486995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40487087_40488424_40488524_40490265_40490411_40491516_40491608_40501443_40501521_40519618_40519724_40527717_40527893_40537098
ENSMUSG00000049252.18_40490296_40551529_1	chr2	-	957	8	ISM	ENSMUSG00000049252.18	ENST00000389484.8	15286	89	1299261	5040	-34181	-4750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCAAGTTTCATGATAGA	NA	NA	NA	NA	NA	NA	NA	NA	40551529	40490295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40490411_40491516_40491608_40501443_40501521_40519618_40519724_40527717_40527893_40537098_40537261_40547375_40547541_40551462
ENSMUSG00000049252.18_40501465_40553777_1	chr2	-	939	7	ISM	ENSMUSG00000049252.18	ENST00000389484.8	15286	89	1297013	16209	-36429	-15919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTGAGCATATCAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	40553777	40501464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40501521_40519618_40519724_40527717_40527893_40537098_40537261_40547375_40547541_40551462_40551589_40553627
ENSMUSG00000049252.18_40547472_40587464_1	chr2	-	920	7	ISM	ENSMUSG00000049252.18	ENST00000389484.8	15286	89	1263326	62216	-70116	-61926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGCTGGCCCAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	40587464	40547471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40547541_40551462_40551589_40553627_40553802_40555084_40555202_40567502_40567610_40569003_40569228_40587361
ENSMUSG00000049252.18_40555153_40592812_1	chr2	-	967	7	ISM	ENSMUSG00000049252.18	ENST00000389484.8	15286	89	1257978	69897	-75464	-69607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCCATCATTGGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	40592812	40555152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40555202_40567502_40567610_40569003_40569228_40587361_40587604_40589523_40589644_40591768_40591904_40592722
ENSMUSG00000049252.18_40569026_40593918_1	chr2	-	930	6	ISM	ENSMUSG00000049252.18	ENST00000389484.8	15286	89	1256872	83770	-76570	-83480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTGTAAATCCTAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	40593918	40569025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40569228_40587361_40587604_40589523_40589644_40591768_40591904_40592722_40592861_40593825
ENSMUSG00000049252.18_40569157_40605469_1	chr2	-	918	7	ISM	ENSMUSG00000049252.18	ENST00000389484.8	15286	89	1245321	83901	-88121	-83611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGAATGCACTGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	40605469	40569156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40569228_40587361_40587604_40589523_40589644_40591768_40591904_40592722_40592861_40593825_40593952_40605383
ENSMUSG00000049252.18_40587509_40615927_1	chr2	-	938	8	ISM	ENSMUSG00000049252.18	ENST00000389484.8	15286	89	1234863	102253	-98579	-101963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTTGAACATAATTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	40615927	40587508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40587604_40589523_40589644_40591768_40591904_40592722_40592861_40593825_40593952_40605383_40605507_40615393_40615527_40615859
ENSMUSG00000049252.18_40591782_40632849_1	chr2	-	955	8	ISM	ENSMUSG00000049252.18	ENST00000389484.8	15286	89	1217941	106526	-115501	99623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGTGTGCAGGTAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	40632849	40591781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40591904_40592722_40592861_40593825_40593952_40605383_40605507_40615393_40615527_40615859_40615967_40620708_40620839_40632773
ENSMUSG00000049252.18_40632774_40712707_1	chr2	-	1013	8	ISM	ENSMUSG00000049252.18	ENST00000389484.8	15286	89	1138083	147518	-195359	58631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGGAACTCTGTGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	40712707	40632773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40632881_40640911_40641029_40691403_40691524_40692902_40693023_40693186_40693304_40700684_40700779_40711597_40711747_40712518
ENSMUSG00000049252.18_40712637_40765058_1	chr2	-	930	7	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	914032	21232	-247710	-21232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAGTCACTCAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	40765058	40712636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40712708_40741642_40741843_40748413_40748596_40750661_40750785_40759126_40759213_40760232_40760417_40764974
ENSMUSG00000049252.18_40748476_40769557_1	chr2	-	923	7	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	909533	57071	-252209	-57071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTACTTGTTAGCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	40769557	40748475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40748596_40750661_40750785_40759126_40759213_40760232_40760417_40764974_40765163_40766553_40766695_40769476
ENSMUSG00000049252.18_40766590_40809228_1	chr2	-	945	8	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	869862	75185	-291880	-75185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGGCTCCAATCAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	40809228	40766589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40766695_40769476_40769600_40772151_40772281_40776652_40776773_40779233_40779357_40792988_40793139_40793377_40793492_40809147
ENSMUSG00000049252.18_40776650_40817896_1	chr2	-	940	8	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	861194	85245	-300548	-85245	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGGCTTCTTTTGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	40817896	40776649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40776773_40779233_40779357_40792988_40793139_40793377_40793492_40809147_40809268_40812303_40812433_40817212_40817339_40817841
ENSMUSG00000049252.18_40776693_40817975_1	chr2	-	976	8	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	861115	85288	-300627	-85288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTGGAGACAGCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	40817975	40776692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40776773_40779233_40779357_40792988_40793139_40793377_40793492_40809147_40809268_40812303_40812433_40817212_40817339_40817841
ENSMUSG00000049252.18_40793057_40888232_1	chr2	-	932	7	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	790858	101652	-370884	-101652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACCAAGCTGGATATGTG	NA	NA	NA	NA	NA	NA	NA	NA	40888232	40793056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40793139_40793377_40793492_40809147_40809268_40812303_40812433_40817212_40817339_40817841_40818035_40888064
ENSMUSG00000049252.18_40812332_41000880_1	chr2	-	930	6	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	678210	120927	-483532	-120927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCGATGAAAAGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	41000880	40812331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40812433_40817212_40817339_40817841_40818035_40888064_40888270_40894579_40894770_41000765
ENSMUSG00000049252.18_40817942_41002357_1	chr2	-	947	5	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	676733	126537	-485009	-126537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTCCAACAAGTACACAGG	NA	NA	NA	NA	NA	NA	NA	NA	41002357	40817941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40818035_40888064_40888270_40894579_40894770_41000765_41001138_41002270
ENSMUSG00000049252.18_40888086_41002789_1	chr2	-	965	5	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	676301	196681	-485441	-196681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGATGGATCACAACGACA	NA	NA	NA	NA	NA	NA	NA	NA	41002789	40888085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40888270_40894579_40894770_41000765_41001138_41002270_41002396_41002695
ENSMUSG00000049252.18_40888234_41003040_1	chr2	-	936	6	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	676050	196829	-485692	-196829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATCATGAGAGCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	41003040	40888233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_40888270_40894579_40894770_41000765_41001138_41002270_41002396_41002695_41002848_41002979
ENSMUSG00000049252.18_41002777_41136036_1	chr2	-	947	8	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	543054	311372	543054	-311372	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGAAGTGTTGCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	41136036	41002776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41002848_41002979_41003107_41012922_41013053_41013610_41013746_41075881_41076014_41078824_41078951_41083549_41083691_41135951
ENSMUSG00000049252.18_41013012_41159284_1	chr2	-	938	8	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	519806	321607	519806	-321607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCAAGACTCAATGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	41159284	41013011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41013053_41013610_41013746_41075881_41076014_41078824_41078951_41083549_41083691_41135951_41136102_41158348_41158444_41159166
ENSMUSG00000049252.18_41135997_41185670_1	chr2	-	929	6	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	493420	444592	493420	-444592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATGAAGGAAGAATTAACA	NA	NA	NA	NA	NA	NA	NA	NA	41185670	41135996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41136102_41158348_41158444_41159166_41159342_41172048_41172277_41174106_41174239_41185476
ENSMUSG00000049252.18_41159232_41192899_1	chr2	-	963	6	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	486191	467827	486191	-467827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAACCTCAATTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	41192899	41159231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41159342_41172048_41172277_41174106_41174239_41185476_41185722_41186007_41186173_41192816
ENSMUSG00000049252.18_41172078_41202562_1	chr2	-	1021	6	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	476528	480673	476528	-480673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGGGACTAGAGACAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	41202562	41172077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41172277_41174106_41174239_41185476_41185722_41186007_41186173_41192816_41193022_41202487
ENSMUSG00000049252.18_41174167_41231771_1	chr2	-	954	6	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	447319	482762	447319	-482762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGCTTGTGCCTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	41231771	41174166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41174239_41185476_41185722_41186007_41186173_41192816_41193022_41202487_41202686_41231702
ENSMUSG00000049252.18_41185657_41234492_1	chr2	-	942	6	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	444598	494252	444598	-494252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCTGTCACATCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	41234492	41185656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41185722_41186007_41186173_41192816_41193022_41202487_41202686_41231702_41231949_41234429
ENSMUSG00000049252.18_41192853_41266003_1	chr2	-	972	5	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	413087	501448	413087	-501448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCCCAGGGCCATAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	41266003	41192852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41193022_41202487_41202686_41231702_41231949_41234429_41234631_41265845
ENSMUSG00000049252.18_41202508_41298366_1	chr2	-	928	5	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	380724	511103	380724	-511103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGTCAGAGAGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	41298366	41202507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41202686_41231702_41231949_41234429_41234631_41265845_41266029_41298246
ENSMUSG00000049252.18_41231728_41325609_1	chr2	-	935	6	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	353481	540323	353481	-540323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGGAAAGCTGCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	41325609	41231727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41231949_41234429_41234631_41265845_41266029_41298246_41298415_41298913_41298995_41325528
ENSMUSG00000049252.18_41234462_41339305_1	chr2	-	952	7	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	339785	543057	339785	-543057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGATGGGTCAGATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	41339305	41234461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41234631_41265845_41266029_41298246_41298415_41298913_41298995_41325528_41325646_41335112_41335239_41339197
ENSMUSG00000049252.18_41265916_41358938_1	chr2	-	974	8	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	320152	574511	320152	-574511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGAAGGGCTGCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	41358938	41265915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41266029_41298246_41298415_41298913_41298995_41325528_41325646_41335112_41335239_41339197_41339339_41348311_41348435_41358833
ENSMUSG00000049252.18_41298352_41361054_1	chr2	-	942	8	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	318036	606947	318036	-606947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGTTCAAGTGGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	41361054	41298351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41298415_41298913_41298995_41325528_41325646_41335112_41335239_41339197_41339339_41348311_41348435_41358833_41359024_41360953
ENSMUSG00000049252.18_41325594_41366722_1	chr2	-	928	7	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	312368	634189	312368	618537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCATGGCTATGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	41366722	41325593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41325646_41335112_41335239_41339197_41339339_41348311_41348435_41358833_41359024_41360953_41361174_41366646
ENSMUSG00000049252.18_41339240_41388294_1	chr2	-	931	6	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	290796	647835	290796	604891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGCCTAGACGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	41388294	41339239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41339339_41348311_41348435_41358833_41359024_41360953_41361174_41366646_41366828_41388176
ENSMUSG00000049252.18_41361036_41401488_1	chr2	-	944	6	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	277602	669631	277602	583095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCACACCAGCACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	41401488	41361035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41361174_41366646_41366828_41388176_41388414_41392010_41392155_41396656_41396829_41401416
ENSMUSG00000049252.18_41361134_41401567_1	chr2	-	925	6	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	277523	669729	277523	582997	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCGTGGGAAGGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	41401567	41361133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41361174_41366646_41366828_41388176_41388414_41392010_41392155_41396656_41396829_41401416
ENSMUSG00000049252.18_41388325_41618725_1	chr2	-	952	6	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	60365	696920	60365	555806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATGATTCCCATAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	41618725	41388324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_41388414_41392010_41392155_41396656_41396829_41401416_41401640_41560912_41561076_41618564
ENSMUSG00000049281.17_40180576_40181282_1	chr9	+	342	2	ISM	ENSMUSG00000049281.17	ENST00000299333.8	1506	7	58	19216	7	-19216	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGATGCCTGCCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	40180575	40181282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40180899_40181263
ENSMUSG00000049281.17_40180729_40188404_1	chr9	+	291	3	ISM	ENSMUSG00000049281.17	ENST00000299333.8	1506	7	211	12094	0	-12094	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAGCCGTGCAGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	40180728	40188404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_40180899_40181263_40181344_40188363
ENSMUSG00000049281.17_40180729_40200498_1	chr9	+	1656	6	NIC	ENSMUSG00000049281.17	novel	1788	6	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTCCTGCCTCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	40180728	40200498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_40181344_40188367_40188528_40190670_40190897_40193719_40193859_40199669_40199755_40200067
ENSMUSG00000049281.17_40188363_40200434_1	chr9	+	982	5	FSM	ENSMUSG00000049281.17	ENST00000657123.1	1046	5	0	64	0	-64	multi-exon	FALSE	canonical	NA	NA	NA	NA	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCCCTGATTAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	40188362	40200434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_40188528_40190670_40190897_40193719_40193859_40199669_40199755_40200067
ENSMUSG00000049281.17_40188416_40200434_1	chr9	+	924	5	NIC	ENSMUSG00000049281.17	novel	1046	5	NA	NA	53	-64	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCCCTGATTAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	40188415	40200434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_40188528_40190670_40190897_40193719_40193859_40199669_40199750_40200067
ENSMUSG00000049281.17_40188416_40200498_1	chr9	+	993	5	FSM	ENSMUSG00000049281.17	ENST00000657123.1	1046	5	53	0	53	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTCCTGCCTCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	40188415	40200498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_40188528_40190670_40190897_40193719_40193859_40199669_40199755_40200067
ENSMUSG00000049303.11_4495936_4503959_1	chr19	-	2375	4	ISM	ENSMUSG00000049303.11	ENSMUST00000059295.10	3581	8	23516	0	23516	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGGGAGCCCTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	4503959	4495935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4497889_4500956_4501091_4502304_4502426_4503792
ENSMUSG00000049303.11_4496226_4506715_1	chr19	-	2327	5	ISM	ENSMUSG00000049303.11	ENSMUST00000059295.10	3581	8	20760	290	20760	-290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGACACCAGCCACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	4506715	4496225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4497889_4500956_4501091_4502304_4502426_4503792_4504009_4506522
ENSMUSG00000049303.11_4496351_4506842_1	chr19	-	2329	5	ISM	ENSMUSG00000049303.11	ENSMUST00000059295.10	3581	8	20633	415	20633	-415	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGGGAGTGGTCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	4506842	4496350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4497889_4500956_4501091_4502304_4502426_4503792_4504009_4506522
ENSMUSG00000049303.11_4496564_4510776_1	chr19	-	2321	6	ISM	ENSMUSG00000049303.11	ENSMUST00000059295.10	3581	8	16699	628	16699	-628	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGATTTTTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4510776	4496563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4497889_4500956_4501091_4502304_4502426_4503792_4504009_4506522_4506916_4510644
ENSMUSG00000049303.11_4496841_4527228_1	chr19	-	2429	8	FSM	ENSMUSG00000049303.11	ENSMUST00000059295.10	3581	8	247	905	247	-905	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTCTAGAAAGGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	4527228	4496840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4497889_4500956_4501091_4502304_4502426_4503792_4504009_4506522_4506916_4510644_4510839_4517934_4517992_4526962
ENSMUSG00000049323.9_60670027_60674641_1	chr11	+	1243	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	1676	4472	1286	2748	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCTGGACCTGGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	60670026	60674641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_60671208_60674579
ENSMUSG00000049323.9_60670505_60675134_1	chr11	+	1258	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	2154	3979	1764	3241	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTCAGCAGGAAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	60670504	60675134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_60671208_60674579
ENSMUSG00000049323.9_60670554_60675192_1	chr11	+	1267	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	2203	3921	1813	3299	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGTGGGCTGAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	60670553	60675192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_60671208_60674579
ENSMUSG00000049339.17_75119422_75122459_1	chr1	+	1085	8	ISM	ENSMUSG00000049339.17	ENSMUST00000097694.11	2561	9	-8	2098	-7	-2094	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGAGCAGTCTTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75119421	75122459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323
ENSMUSG00000049339.17_75119624_75123238_1	chr1	+	1048	9	FSM	ENSMUSG00000049339.17	ENSMUST00000097694.11	2561	9	194	1319	186	-1315	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGCTTCAGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	75119623	75123238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
ENSMUSG00000049339.17_75120022_75123426_1	chr1	+	1078	8	ISM	ENSMUSG00000049339.17	ENSMUST00000190240.7	2438	10	584	1127	584	-1127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCAGTTACCCCCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	75120021	75123426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
ENSMUSG00000049339.17_75120022_75124125_1	chr1	+	1777	8	ISM	ENSMUSG00000049339.17	ENSMUST00000190240.7	2438	10	584	428	584	-428	intron_retention	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCACACTCCCGTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	75120021	75124125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
ENSMUSG00000049339.17_75121021_75124311_1	chr1	+	1761	6	ISM	ENSMUSG00000049339.17	ENSMUST00000190240.7	2438	10	1583	242	1583	-242	intron_retention	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACCCTTGTCCAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	75121020	75124311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
ENSMUSG00000049354.9_105927726_105947608_1	chr11	+	3180	7	FSM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	28	2542	28	1324	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGGGTGGACTTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	105927725	105947608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_105928088_105937516_105937676_105938462_105938575_105938968_105939088_105942582_105942793_105944556_105944675_105945508
ENSMUSG00000049354.9_105927850_105946284_1	chr11	+	1132	3	FSM	ENSMUSG00000049354.9	ENST00000415273.2	1217	3	85	0	85	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACCCCACGAGCAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	105927849	105946284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_105928088_105944556_105944675_105945508
ENSMUSG00000049354.9_105927850_105946284_2	chr11	+	1130	3	NNC	ENSMUSG00000049354.9	novel	1217	3	NA	NA	85	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACCCCACGAGCAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	105927849	105946284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_105928088_105944556_105944675_105945510
ENSMUSG00000049354.9_105927864_105947681_1	chr11	+	3115	7	FSM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	166	2469	99	1397	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGCAGCAGTTTTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	105927863	105947681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_105928088_105937516_105937676_105938462_105938575_105938968_105939088_105942582_105942793_105944556_105944675_105945508
ENSMUSG00000049354.9_105937569_105947938_1	chr11	+	3096	6	ISM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	9871	2212	9804	1654	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGGGCGTGAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	105937568	105947938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105937676_105938462_105938575_105938968_105939088_105942582_105942793_105944556_105944675_105945508
ENSMUSG00000049354.9_105938553_105948129_1	chr11	+	3090	5	ISM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	10855	2021	10788	1845	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCAAGCTACAGCTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	105938552	105948129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105938575_105938968_105939088_105942582_105942793_105944556_105944675_105945508
ENSMUSG00000049354.9_105944589_105948542_1	chr11	+	3120	2	ISM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	16891	1608	16824	-1608	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCAGCCTAGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	105944588	105948542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105944675_105945508
ENSMUSG00000049382.11_101905261_101907373_1	chr15	-	879	5	ISM	ENSMUSG00000049382.11	ENST00000557533.2	1128	8	2689	-116	2689	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTGGCCAACCTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	101907373	101905260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101905569_101906094_101906154_101906287_101906509_101906825_101906952_101907208
ENSMUSG00000049382.11_101905377_101907961_1	chr15	-	859	6	ISM	ENSMUSG00000049382.11	ENSMUST00000023952.10	1958	9	4956	244	2101	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGCCACTGAAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	101907961	101905376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101905569_101906094_101906154_101906287_101906509_101906825_101906952_101907208_101907374_101907865
ENSMUSG00000049382.11_101905377_101912669_1	chr15	-	1447	9	FSM	ENSMUSG00000049382.11	ENST00000489121.1	1454	9	5	2	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGCCACTGAAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	101912669	101905376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_101905569_101906094_101906154_101906287_101906490_101906825_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332
ENSMUSG00000049382.11_101906095_101912669_1	chr15	-	1256	8	NIC	ENSMUSG00000049382.11	novel	1264	8	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGAGTCCTGGGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	101912669	101906094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_-_101906154_101906287_101906509_101906825_101906952_101907208_101907356_101907865_101907962_101909014_101909076_101909851_101910061_101912332
ENSMUSG00000049382.11_101906095_101912669_2	chr15	-	1260	8	FSM	ENSMUSG00000049382.11	ENST00000433288.2	1264	8	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGAGTCCTGGGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	101912669	101906094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_101906154_101906287_101906509_101906825_101906952_101907208_101907356_101907861_101907962_101909014_101909076_101909851_101910061_101912332
ENSMUSG00000049382.11_101906095_101912669_3	chr15	-	1253	8	NNC	ENSMUSG00000049382.11	novel	1264	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGAGTCCTGGGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	101912669	101906094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_101906147_101906287_101906509_101906825_101906952_101907208_101907356_101907861_101907962_101909014_101909076_101909851_101910061_101912332
ENSMUSG00000049382.11_101906095_101912669_4	chr15	-	1253	8	NNC	ENSMUSG00000049382.11	novel	1264	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGAGTCCTGGGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	101912669	101906094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_101906154_101906287_101906509_101906825_101906952_101907208_101907356_101907861_101907962_101909014_101909069_101909851_101910061_101912332
ENSMUSG00000049382.11_101906095_101912669_5	chr15	-	1254	8	NNC	ENSMUSG00000049382.11	novel	1264	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1576	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGAGTCCTGGGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	101912669	101906094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_101906154_101906287_101906509_101906825_101906952_101907208_101907350_101907861_101907962_101909014_101909076_101909851_101910061_101912332
ENSMUSG00000049382.11_101906382_101912355_1	chr15	-	807	7	ISM	ENSMUSG00000049382.11	ENSMUST00000023952.10	1958	9	562	1249	318	-287	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCGCGAGTACCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	101912355	101906381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101906509_101906825_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332
ENSMUSG00000049382.11_101906436_101912409_1	chr15	-	807	7	ISM	ENSMUSG00000049382.11	ENSMUST00000023952.10	1958	9	508	1303	264	-341	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGCTGAGCTGGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	101912409	101906435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101906509_101906825_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332
ENSMUSG00000049382.11_101906490_101912458_1	chr15	-	802	7	ISM	ENSMUSG00000049382.11	ENSMUST00000023952.10	1958	9	459	1357	215	-395	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCGCTGATGCTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	101912458	101906489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101906509_101906825_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332
ENSMUSG00000049382.11_101906921_101912576_1	chr15	-	806	6	ISM	ENSMUSG00000049382.11	ENST00000489121.1	1454	9	98	1546	97	-826	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGGGATGATCTGCGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	101912576	101906920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332
ENSMUSG00000049396.7_76103349_76108407_1	chr11	-	1505	2	FSM	ENSMUSG00000049396.7	ENSMUST00000102500.5	3540	2	83	1952	83	-1952	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAGCCTCAGATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	76108407	76103348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_76104750_76108303
ENSMUSG00000049421.14_29799104_29804518_1	chr7	+	908	2	ISM	ENSMUSG00000049421.14	ENSMUST00000050735.12	4006	3	4885	2529	4494	-2521	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGGCAAGTCATATCT	NA	NA	NA	NA	NA	NA	NA	NA	29799103	29804518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_29799148_29803654
ENSMUSG00000049422.8_75771790_75773238_1	chr10	+	378	3	ISM	ENSMUSG00000049422.8	ENST00000401675.7	458	4	5	195	5	-195	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGAGGGCTTCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	75771789	75773238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75771839_75772071_75772280_75773117
ENSMUSG00000049422.8_75772069_75773433_1	chr10	+	407	3	ISM	ENSMUSG00000049422.8	ENST00000401675.7	458	4	284	0	284	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGGCCTGCTCATCGCC	NA	NA	NA	NA	NA	NA	NA	NA	75772068	75773433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75772280_75773117_75773289_75773408
ENSMUSG00000049422.8_75772176_75773433_1	chr10	+	300	3	ISM	ENSMUSG00000049422.8	ENST00000401675.7	458	4	391	0	391	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGGCCTGCTCATCGCC	NA	NA	NA	NA	NA	NA	NA	NA	75772175	75773433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_75772280_75773117_75773289_75773408
ENSMUSG00000049439.14_60382482_60427219_1	chr1	+	2216	13	NNC	ENSMUSG00000049439.14	novel	2223	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGATTGTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	60382481	60427219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_60382617_60391279_60391330_60392067_60392235_60393672_60393816_60402355_60402517_60405807_60405887_60410379_60410496_60411748_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
ENSMUSG00000049439.14_60382482_60427219_2	chr1	+	2216	13	NNC	ENSMUSG00000049439.14	novel	2223	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGATTGTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	60382481	60427219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_60382617_60391279_60391330_60392067_60392235_60393672_60393816_60402348_60402517_60405807_60405887_60410379_60410496_60411755_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
ENSMUSG00000049482.17_123202882_123209094_1	chr8	+	2329	15	FSM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	0	737	0	-737	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGATGACCATGGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	123202881	123209094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
ENSMUSG00000049482.17_123202959_123209141_1	chr8	+	2299	15	FSM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	77	690	77	-690	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCGATGACCCACCACTC	NA	NA	NA	NA	NA	NA	NA	NA	123202958	123209141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
ENSMUSG00000049482.17_123203914_123209415_1	chr8	+	2345	12	ISM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	1032	416	1032	-416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGCCCATTGGGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	123203913	123209415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
ENSMUSG00000049482.17_123205509_123209571_1	chr8	+	2285	10	ISM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	2627	260	2627	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCCCACATGCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	123205508	123209571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
ENSMUSG00000049482.17_123205721_123209739_1	chr8	+	2347	9	ISM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	2839	92	2839	-92	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGTGTTAGGCAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	123205720	123209739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
ENSMUSG00000049482.17_123205840_123209831_1	chr8	+	2320	9	ISM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	2958	0	2958	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGTTGTACAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	123205839	123209831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
ENSMUSG00000049488.15_12039645_12047890_1	chr4	-	914	7	ISM	ENSMUSG00000049488.15	ENST00000453906.6	2102	18	38112	50	38112	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTGTATTTAATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	12047890	12039644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809
ENSMUSG00000049488.15_12039749_12051406_1	chr4	-	829	8	ISM	ENSMUSG00000049488.15	ENST00000453906.6	2102	18	34596	154	34596	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAACTTGTAATACATAT	NA	NA	NA	NA	NA	NA	NA	NA	12051406	12039748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387
ENSMUSG00000049488.15_12039815_12051449_1	chr4	-	806	8	ISM	ENSMUSG00000049488.15	ENST00000453906.6	2102	18	34553	220	34553	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTGTGAATACAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	12051449	12039814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387
ENSMUSG00000049488.15_12039856_12051510_1	chr4	-	826	8	ISM	ENSMUSG00000049488.15	ENST00000453906.6	2102	18	34492	261	34492	-211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTGGCAACCAAAACACTA	NA	NA	NA	NA	NA	NA	NA	NA	12051510	12039855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387
ENSMUSG00000049488.15_12040635_12053520_1	chr4	-	881	8	ISM	ENSMUSG00000049488.15	ENST00000453906.6	2102	18	32482	1040	32482	-990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATCTAGCAGCATATCT	NA	NA	NA	NA	NA	NA	NA	NA	12053520	12040634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446
ENSMUSG00000049488.15_12043461_12053774_1	chr4	-	908	8	ISM	ENSMUSG00000049488.15	ENST00000453906.6	2102	18	32228	3866	32228	-3816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTATGTCCCTGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	12053774	12043460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674
ENSMUSG00000049488.15_12045793_12054832_1	chr4	-	890	8	ISM	ENSMUSG00000049488.15	ENST00000453906.6	2102	18	31170	6198	31170	-6148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATTCCGATGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	12054832	12045792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745
ENSMUSG00000049488.15_12046003_12055129_1	chr4	-	882	8	ISM	ENSMUSG00000049488.15	ENST00000453906.6	2102	18	30873	6408	30873	-6358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTATAAAGTATTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	12055129	12046002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030
ENSMUSG00000049488.15_12046093_12057333_1	chr4	-	810	9	ISM	ENSMUSG00000049488.15	ENST00000453906.6	2102	18	28669	6498	28669	-6448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCCAACACGGATGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	12057333	12046092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315
ENSMUSG00000049488.15_12047197_12057414_1	chr4	-	865	8	ISM	ENSMUSG00000049488.15	ENST00000453906.6	2102	18	28588	7602	28588	-7552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAACGGATTCTACGTCT	NA	NA	NA	NA	NA	NA	NA	NA	12057414	12047196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315
ENSMUSG00000049488.15_12047197_12058577_1	chr4	-	922	9	ISM	ENSMUSG00000049488.15	ENST00000453906.6	2102	18	27425	7602	27425	-7552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAACGGATTCTACGTCT	NA	NA	NA	NA	NA	NA	NA	NA	12058577	12047196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520
ENSMUSG00000049488.15_12047807_12061860_1	chr4	-	913	9	ISM	ENSMUSG00000049488.15	ENST00000453906.6	2102	18	24142	8212	24142	-8162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTTCTGATAGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	12061860	12047806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12061754
ENSMUSG00000049488.15_12051459_12063090_1	chr4	-	814	9	ISM	ENSMUSG00000049488.15	ENST00000453906.6	2102	18	22912	11864	22912	-11814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCCTTACAGCCGCATT	NA	NA	NA	NA	NA	NA	NA	NA	12063090	12051458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12061754_12061861_12063034
ENSMUSG00000049488.15_12053445_12079969_1	chr4	-	909	9	ISM	ENSMUSG00000049488.15	ENST00000453906.6	2102	18	6033	13850	6033	-13800	internal_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATGAGCTATCATATAA	NA	NA	NA	NA	NA	NA	NA	NA	12079969	12053444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12061754_12061861_12063034_12063159_12079874
ENSMUSG00000049488.15_12053551_12085931_1	chr4	-	822	10	ISM	ENSMUSG00000049488.15	ENST00000453906.6	2102	18	71	13956	71	-13906	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATGGAGAACGTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	12085931	12053550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12061754_12061861_12063034_12063159_12079874_12079969_12085911
ENSMUSG00000049504.13_53371670_53385718_1	chr3	+	1559	10	ISM	ENSMUSG00000049504.13	ENST00000625998.2	4009	12	37	3607	37	-3458	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGCTAGTGCCACGTC	NA	NA	NA	NA	NA	NA	NA	NA	53371669	53385718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_53371741_53376901_53376971_53377693_53377789_53378844_53378939_53379396_53379508_53380904_53380989_53382108_53382188_53382735_53382832_53383077_53383123_53384903
ENSMUSG00000049504.13_53379464_53386145_1	chr3	+	1590	6	ISM	ENSMUSG00000049504.13	ENST00000625998.2	4009	12	7831	3180	7831	-3031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTCACTTCATTGACT	NA	NA	NA	NA	NA	NA	NA	NA	53379463	53386145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_53379508_53380904_53380989_53382108_53382188_53382735_53382832_53383077_53383123_53384903
ENSMUSG00000049504.13_53385108_53387034_1	chr3	+	1534	2	ISM	ENSMUSG00000049504.13	ENST00000625998.2	4009	12	13475	2291	13475	-2142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCAGGTATCCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	53385107	53387034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_53386588_53386980
ENSMUSG00000049504.13_53385156_53387092_1	chr3	+	1544	2	ISM	ENSMUSG00000049504.13	ENST00000625998.2	4009	12	13523	2233	13523	-2084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACAGTGCAGCTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	53385155	53387092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_53386588_53386980
ENSMUSG00000049504.13_53385552_53388285_1	chr3	+	1540	3	ISM	ENSMUSG00000049504.13	ENST00000625998.2	4009	12	13919	1040	13919	-891	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTACCTCCCTTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	53385551	53388285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_53386588_53386980_53387132_53387932
ENSMUSG00000049504.13_53385903_53388657_1	chr3	+	1561	3	ISM	ENSMUSG00000049504.13	ENST00000625998.2	4009	12	14270	668	14270	-519	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACTAAAAATGTATACCCA	NA	NA	NA	NA	NA	NA	NA	NA	53385902	53388657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_53386588_53386980_53387132_53387932
ENSMUSG00000049504.13_53385999_53388749_1	chr3	+	1557	3	ISM	ENSMUSG00000049504.13	ENST00000625998.2	4009	12	14366	576	14366	-427	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCGACAGGTGAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	53385998	53388749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_53386588_53386980_53387132_53387932
ENSMUSG00000049504.13_53386980_53389337_1	chr3	+	1557	2	ISM	ENSMUSG00000049504.13	ENST00000625998.2	4009	12	15347	-12	15347	12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACGATGCGCAGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	53386979	53389337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_53387132_53387932
ENSMUSG00000049515.13_91270295_91273945_1	chr1	+	2072	2	ISM	ENSMUSG00000049515.13	ENSMUST00000176156.2	2886	8	20440	-286	0	286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1543	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAATGGCTCAGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	91270294	91273945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_91270458_91272036
ENSMUSG00000049515.13_91270295_91273945_2	chr1	+	2066	2	NNC	ENSMUSG00000049515.13	novel	2082	3	NA	NA	0	286	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1543	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAATGGCTCAGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	91270294	91273945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_91270458_91272042
ENSMUSG00000049517.9_91071077_91072842_1	chr13	+	710	4	FSM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	0	227	0	-227	multi-exon	FALSE	canonical	NA	NA	NA	NA	5160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAATATTTTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	91071076	91072842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_91071319_91071705_91071866_91072444_91072566_91072655
ENSMUSG00000049517.9_91071077_91072842_2	chr13	+	705	4	NNC	ENSMUSG00000049517.9	novel	937	4	NA	NA	0	-227	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAATATTTTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	91071076	91072842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_91071319_91071710_91071866_91072444_91072566_91072655
ENSMUSG00000049517.9_91071250_91072903_1	chr13	+	598	4	FSM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	173	166	173	-166	multi-exon	FALSE	canonical	NA	NA	NA	NA	4066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGACAGCTACTAAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	91071249	91072903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_91071319_91071705_91071866_91072444_91072566_91072655
ENSMUSG00000049517.9_91071705_91072952_1	chr13	+	579	3	ISM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	628	117	628	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACACTGCAATAAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	91071704	91072952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_91071866_91072444_91072566_91072655
ENSMUSG00000049517.9_91071784_91073070_1	chr13	+	618	3	ISM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	707	-1	707	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTCTATAGGATAATTT	NA	NA	NA	NA	NA	NA	NA	NA	91071783	91073070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_91071866_91072444_91072566_91072655
ENSMUSG00000049521.3_78726824_78734254_1	chr15	+	1717	3	FSM	ENSMUSG00000049521.3	ENSMUST00000059619.3	2560	3	0	843	0	-843	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAGGCAGGCATGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	78726823	78734254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_78726926_78731294_78732020_78733364
ENSMUSG00000049521.3_78726824_78734337_1	chr15	+	1800	3	FSM	ENSMUSG00000049521.3	ENSMUST00000059619.3	2560	3	0	760	0	-760	multi-exon	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCACCCCCTGTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	78726823	78734337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_78726926_78731294_78732020_78733364
ENSMUSG00000049521.3_78731380_78734397_1	chr15	+	1673	2	ISM	ENSMUSG00000049521.3	ENSMUST00000059619.3	2560	3	4556	700	4556	-700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTTGGGGCAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	78731379	78734397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78732020_78733364
ENSMUSG00000049521.3_78731549_78734607_1	chr15	+	1714	2	ISM	ENSMUSG00000049521.3	ENSMUST00000059619.3	2560	3	4725	490	4725	-490	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTGTTAAGATCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	78731548	78734607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78732020_78733364
ENSMUSG00000049521.3_78731826_78734857_1	chr15	+	1687	2	ISM	ENSMUSG00000049521.3	ENSMUST00000059619.3	2560	3	5002	240	5002	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAATCCCATGGGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	78731825	78734857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78732020_78733364
ENSMUSG00000049555.11_110695773_110699818_1	chr9	-	531	3	FSM	ENSMUSG00000049555.11	ENST00000644830.1	528	3	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAGGGACAAGACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	110699818	110695772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_110696026_110696507_110696666_110699698
ENSMUSG00000049583.16_87233583_87252410_1	chr7	+	1023	2	FSM	ENSMUSG00000049583.16	ENST00000534201.5	1026	2	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGATACTTTCCAACTT	NA	NA	NA	NA	NA	NA	NA	NA	87233582	87252410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_87233749_87251553
ENSMUSG00000049624.15_78444027_78448267_1	chr9	-	1642	2	ISM	ENSMUSG00000049624.15	ENSMUST00000117645.8	3114	11	47030	239	47030	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGGACAGCCGGGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	78448267	78444026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78445582_78448180
ENSMUSG00000049624.15_78444130_78460256_1	chr9	-	1584	3	ISM	ENSMUSG00000049624.15	ENSMUST00000117645.8	3114	11	35041	342	35041	-342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTCCCTAGTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	78460256	78444129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78445582_78448180_78448272_78460215
ENSMUSG00000049624.15_78444595_78468043_1	chr9	-	1592	6	ISM	ENSMUSG00000049624.15	ENSMUST00000117645.8	3114	11	27254	807	27254	-807	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGTTAATGTGCAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	78468043	78444594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78445582_78448180_78448272_78460215_78460364_78464738_78464872_78466292_78466452_78467969
ENSMUSG00000049624.15_78444862_78484358_1	chr9	-	1592	9	ISM	ENSMUSG00000049624.15	ENSMUST00000117645.8	3114	11	10939	1074	10939	-1074	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTAAAATACCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	78484358	78444861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78445582_78448180_78448272_78460215_78460364_78464738_78464872_78466292_78466452_78467969_78468089_78478303_78478391_78481931_78482020_78484311
ENSMUSG00000049624.15_78444945_78484428_1	chr9	-	1579	9	ISM	ENSMUSG00000049624.15	ENSMUST00000117645.8	3114	11	10869	1157	10869	-1157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAATGAAGCTGAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	78484428	78444944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78445582_78448180_78448272_78460215_78460364_78464738_78464872_78466292_78466452_78467969_78468089_78478303_78478391_78481931_78482020_78484311
ENSMUSG00000049624.15_78445116_78485848_1	chr9	-	1581	10	ISM	ENSMUSG00000049624.15	ENSMUST00000052441.12	3236	11	9475	1346	9449	-1328	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	78485848	78445115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78445582_78448180_78448272_78460215_78460364_78464738_78464872_78466292_78466452_78467969_78468089_78478303_78478391_78481931_78482020_78484311_78484546_78485792
ENSMUSG00000049624.15_78445178_78485910_1	chr9	-	1581	10	ISM	ENSMUSG00000049624.15	ENSMUST00000052441.12	3236	11	9413	1408	9387	-1390	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGATGCCCTCTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	78485910	78445177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78445582_78448180_78448272_78460215_78460364_78464738_78464872_78466292_78466452_78467969_78468089_78478303_78478391_78481931_78482020_78484311_78484546_78485792
ENSMUSG00000049624.15_78445240_78485966_1	chr9	-	1575	10	ISM	ENSMUSG00000049624.15	ENSMUST00000052441.12	3236	11	9357	1470	9331	-1452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGAGGTCCTGAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	78485966	78445239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_78445582_78448180_78448272_78460215_78460364_78464738_78464872_78466292_78466452_78467969_78468089_78478303_78478391_78481931_78482020_78484311_78484546_78485792
ENSMUSG00000049641.16_51898798_51905704_1	chr10	+	929	3	FSM	ENSMUSG00000049641.16	ENST00000352536.7	1039	3	50	60	50	-60	multi-exon	FALSE	canonical	NA	NA	NA	NA	2211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGCAGCTGTTGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	51898797	51905704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_51898900_51901152_51901460_51905184
ENSMUSG00000049643.16_27255835_27274165_1	chr7	+	750	7	ISM	ENSMUSG00000049643.16	ENSMUST00000187960.7	1989	11	3124	7359	3124	-7354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGGCTGTGTGGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	27255834	27274165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015
ENSMUSG00000049643.16_27263910_27279845_1	chr7	+	729	7	ISM	ENSMUSG00000049643.16	ENSMUST00000187032.2	1871	9	4009	1674	4009	-1674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTCCTGCAGTATGC	NA	NA	NA	NA	NA	NA	NA	NA	27263909	27279845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
ENSMUSG00000049643.16_27265083_27281524_1	chr7	+	1534	6	ISM	ENSMUSG00000049643.16	ENSMUST00000187032.2	1871	9	5182	-5	5182	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	27265082	27281524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761_27280117_27280775
ENSMUSG00000049643.16_27274093_27280313_1	chr7	+	696	3	ISM	ENSMUSG00000049643.16	ENSMUST00000187032.2	1871	9	14192	1206	14192	-1206	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTCAGCCTTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	27274092	27280313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_27274166_27278137_27278209_27279761
ENSMUSG00000049658.14_100214326_100225955_1	chr13	-	587	4	ISM	ENSMUSG00000049658.14	ENST00000380675.3	1704	10	14586	0	14391	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	809	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGAGCCTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	100225955	100214325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100214622_100215166_100215308_100220648_100220704_100225860
ENSMUSG00000049658.14_100214539_100230053_1	chr13	-	640	6	ISM	ENSMUSG00000049658.14	ENST00000380675.3	1704	10	10488	213	10293	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	819	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATGCTGAGACAGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	100230053	100214538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100214622_100215166_100215308_100220648_100220704_100225860_100225956_100228701_100228836_100229921
ENSMUSG00000049658.14_100220649_100235103_1	chr13	-	586	6	ISM	ENSMUSG00000049658.14	ENSMUST00000109379.9	7567	38	5243	60836	5243	-6323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATTAAAGCATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	100235103	100220648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100220704_100225860_100225956_100228701_100228836_100229921_100230054_100234045_100234106_100234993
ENSMUSG00000049658.14_100220651_100235505_1	chr13	-	629	7	ISM	ENSMUSG00000049658.14	ENSMUST00000109379.9	7567	38	4841	60838	4841	-6325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTAAGTATTAAAGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	100235505	100220650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100220704_100225860_100225956_100228701_100228836_100229921_100230054_100234045_100234106_100234993_100235104_100235460
ENSMUSG00000049658.14_100225856_100235477_1	chr13	-	553	6	ISM	ENSMUSG00000049658.14	ENSMUST00000109379.9	7567	38	4869	66043	4869	-11530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCCTATAACATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	100235477	100225855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100225956_100228701_100228836_100229921_100230054_100234045_100234106_100234993_100235104_100235460
ENSMUSG00000049658.14_100225901_100235535_1	chr13	-	566	6	ISM	ENSMUSG00000049658.14	ENSMUST00000109379.9	7567	38	4811	66088	4811	-11575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAACTTTTTCCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	100235535	100225900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100225956_100228701_100228836_100229921_100230054_100234045_100234106_100234993_100235104_100235460
ENSMUSG00000049658.14_100225929_100235609_1	chr13	-	612	6	ISM	ENSMUSG00000049658.14	ENSMUST00000109379.9	7567	38	4737	66116	4737	-11603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGTAGGAACTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	100235609	100225928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100225956_100228701_100228836_100229921_100230054_100234045_100234106_100234993_100235104_100235460
ENSMUSG00000049658.14_100229980_100240219_1	chr13	-	606	5	ISM	ENSMUSG00000049658.14	ENSMUST00000109379.9	7567	38	127	70167	127	-15654	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTTCCTCGAGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	100240219	100229979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100230054_100234045_100234106_100234993_100235104_100235460_100235738_100240134
ENSMUSG00000049658.14_100229981_100240196_1	chr13	-	582	5	ISM	ENSMUSG00000049658.14	ENSMUST00000109379.9	7567	38	150	70168	150	-15655	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGGTTCCTCGAGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	100240196	100229980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100230054_100234045_100234106_100234993_100235104_100235460_100235738_100240134
ENSMUSG00000049658.14_100234046_100240346_1	chr13	-	659	4	ISM	ENSMUSG00000049658.14	ENST00000380675.3	1704	10	195	19720	0	-19720	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	815	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATCTTATCGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	100240346	100234045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100234106_100234993_100235104_100235460_100235738_100240134
ENSMUSG00000049659.16_20636118_20675806_1	chr11	-	928	9	FSM	ENSMUSG00000049659.16	ENSMUST00000146722.9	3763	9	1801	1034	1801	-62	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTGTTGATGTTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	20675806	20636117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_20636199_20642464_20642589_20646750_20646832_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684
ENSMUSG00000049659.16_20636118_20675929_1	chr11	-	1051	9	FSM	ENSMUSG00000049659.16	ENSMUST00000146722.9	3763	9	1678	1034	1678	-62	multi-exon	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTGTTGATGTTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	20675929	20636117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_20636199_20642464_20642589_20646750_20646832_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684
ENSMUSG00000049659.16_20646779_20676172_1	chr11	-	1061	7	ISM	ENSMUSG00000049659.16	ENSMUST00000146722.9	3763	9	1435	11695	1435	-10723	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGCTCTAGCAGCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	20676172	20646778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_20646832_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684
ENSMUSG00000049659.16_20658627_20676386_1	chr11	-	1092	4	ISM	ENSMUSG00000049659.16	ENSMUST00000146722.9	3763	9	1221	23543	1221	-22571	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCAAAAAAAAAAAAAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	20676386	20658626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_20658738_20659619_20659747_20662163_20662316_20675684
ENSMUSG00000049659.16_20659655_20676503_1	chr11	-	1063	3	ISM	ENSMUSG00000049659.16	ENSMUST00000146722.9	3763	9	1104	24571	1104	-23599	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCTCCTTGGGAATA	NA	NA	NA	NA	NA	NA	NA	NA	20676503	20659654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_20659747_20662163_20662316_20675684
ENSMUSG00000049659.16_20659717_20676519_1	chr11	-	1017	3	ISM	ENSMUSG00000049659.16	ENSMUST00000146722.9	3763	9	1088	24633	1088	-23661	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACATCCATGATGCACATG	NA	NA	NA	NA	NA	NA	NA	NA	20676519	20659716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_20659747_20662163_20662316_20675684
ENSMUSG00000049659.16_20662251_20676656_1	chr11	-	1037	2	ISM	ENSMUSG00000049659.16	ENST00000409933.5	2791	9	951	26195	951	-26195	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAAGAGGAGGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	20676656	20662250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_20662316_20675684
ENSMUSG00000049670.10_42063378_42066441_1	chr19	-	1465	3	ISM	ENSMUSG00000049670.10	ENSMUST00000051772.10	1800	5	8355	-3	8340	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTATGAACTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	42066441	42063377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_42064695_42064893_42065004_42066403
ENSMUSG00000049670.10_42063690_42074796_1	chr19	-	1491	5	FSM	ENSMUSG00000049670.10	ENSMUST00000051772.10	1800	5	0	309	0	-309	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGTCCATCCAAGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	42074796	42063689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42074635
ENSMUSG00000049670.10_42063752_42074796_1	chr19	-	1429	5	FSM	ENSMUSG00000049670.10	ENSMUST00000051772.10	1800	5	0	371	0	-371	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGAGCTCCTTCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	42074796	42063751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42074635
ENSMUSG00000049670.10_42064453_42074796_1	chr19	-	618	4	FSM	ENSMUSG00000049670.10	ENST00000478953.1	601	4	-15	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTTGATGCCACAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	42074796	42064452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_42064695_42066403_42066519_42066922_42067023_42074635
ENSMUSG00000049670.10_42064453_42074796_2	chr19	-	614	4	NNC	ENSMUSG00000049670.10	novel	1800	5	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTTGATGCCACAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	42074796	42064452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_42064695_42066407_42066519_42066922_42067023_42074635
ENSMUSG00000049680.18_5667174_5676425_1	chr11	-	1258	4	ISM	ENSMUSG00000049680.18	ENST00000336086.10	3224	5	588	1489	588	-1489	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGCCATCATGTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	5676425	5667173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347
ENSMUSG00000049680.18_5667263_5676410_1	chr11	-	1154	4	ISM	ENSMUSG00000049680.18	ENST00000336086.10	3224	5	603	1578	603	-1578	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGGCTGATCCCAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	5676410	5667262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347
ENSMUSG00000049680.18_5667291_5676507_1	chr11	-	1223	4	ISM	ENSMUSG00000049680.18	ENST00000336086.10	3224	5	506	1606	506	-1606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACGGAACACGAACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	5676507	5667290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347
ENSMUSG00000049680.18_5667428_5676780_1	chr11	-	1248	5	FSM	ENSMUSG00000049680.18	ENST00000336086.10	3224	5	233	1743	233	-1743	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTCAAGCTCTTGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	5676780	5667427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676527_5676637
ENSMUSG00000049680.18_5667499_5676819_1	chr11	-	1216	5	FSM	ENSMUSG00000049680.18	ENST00000336086.10	3224	5	194	1814	194	-1814	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCTGGATGTTTTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	5676819	5667498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676527_5676637
ENSMUSG00000049680.18_5667603_5676928_1	chr11	-	1221	5	FSM	ENSMUSG00000049680.18	ENST00000336086.10	3224	5	85	1918	85	-1918	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGGGACTGCTTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	5676928	5667602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676527_5676637
ENSMUSG00000049680.18_5672802_5691157_1	chr11	-	222	4	FSM	ENSMUSG00000049680.18	ENST00000446958.1	222	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCATTTTCTCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	5691157	5672801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_5672841_5673110_5673162_5676347_5676419_5691096
ENSMUSG00000049728.15_127465165_127467308_1	chr7	-	1752	2	ISM	ENSMUSG00000049728.15	ENSMUST00000106261.8	2410	3	7510	0	7510	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTCTGTATTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	127467308	127465164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_127466536_127466927
ENSMUSG00000049751.7_69229515_69230857_1	chr12	-	518	2	NNC	ENSMUSG00000049751.7	novel	526	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCAAGCCTTGTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	69230857	69229514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_69229940_69230764
ENSMUSG00000049751.7_69229608_69230543_1	chr12	-	437	2	FSM	ENSMUSG00000049751.7	ENSMUST00000110620.2	757	2	217	103	217	-93	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGATCCAGTTCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69230543	69229607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_69229940_69230438
ENSMUSG00000049751.7_69229713_69230611_1	chr12	-	400	2	FSM	ENSMUSG00000049751.7	ENSMUST00000110620.2	757	2	149	208	149	-198	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCAGGCTTGAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	69230611	69229712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_69229940_69230438
ENSMUSG00000049760.7_56914620_56916682_1	chr17	-	498	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	89	168	89	-168	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCGGTTTTCTGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	56916682	56914619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
ENSMUSG00000049775.17_165990089_165990974_1	chrX	-	485	2	ISM	ENSMUSG00000049775.17	ENSMUST00000112175.2	864	3	849	-199	849	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCTGCTTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	165990974	165990088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_165990532_165990932
ENSMUSG00000049775.17_165990089_165992145_1	chrX	-	602	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112172.4	768	3	166	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCTGCTTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	165992145	165990088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_165990532_165990932_165991048_165992101
ENSMUSG00000049775.17_165990288_165992311_1	chrX	-	569	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112172.4	768	3	0	199	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAAAGAACTTGCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	165992311	165990287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_165990532_165990932_165991048_165992101
ENSMUSG00000049792.7_111676475_111679550_1	chr12	-	1445	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	141	553	141	-137	multi-exon	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGAGCTGATCTCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	111679550	111676474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_111677847_111679477
ENSMUSG00000049807.17_97344698_97356851_1	chr11	+	990	8	ISM	ENSMUSG00000049807.17	ENST00000621154.1	1769	15	5	25205	5	-25205	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAAACCCCCTGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	97344697	97356851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835
ENSMUSG00000049807.17_97344707_97366982_1	chr11	+	1595	13	ISM	ENSMUSG00000049807.17	ENST00000621154.1	1769	15	14	15074	14	-15074	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGTTGATCCAGCATGTA	NA	NA	NA	NA	NA	NA	NA	NA	97344706	97366982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873
ENSMUSG00000049807.17_97344744_97356910_1	chr11	+	1003	8	ISM	ENSMUSG00000049807.17	ENST00000621154.1	1769	15	51	25146	51	-25146	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGAATCCGGTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	97344743	97356910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835
ENSMUSG00000049807.17_97344809_97356951_1	chr11	+	979	8	ISM	ENSMUSG00000049807.17	ENST00000621154.1	1769	15	116	25105	116	-25105	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGTGGGTCCCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	97344808	97356951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835
ENSMUSG00000049807.17_97345040_97357307_1	chr11	+	997	8	ISM	ENSMUSG00000049807.17	ENST00000621154.1	1769	15	347	24749	347	-24749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAATCAACTGGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	97345039	97357307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257
ENSMUSG00000049807.17_97345040_97382056_1	chr11	+	1661	14	NIC	ENSMUSG00000049807.17	novel	1849	15	NA	NA	347	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTAAGGGACCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	97345039	97382056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381909
ENSMUSG00000049807.17_97345266_97357413_1	chr11	+	997	7	ISM	ENSMUSG00000049807.17	ENST00000621154.1	1769	15	573	24643	573	-24643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTGTGGCTCGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	97345265	97357413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257
ENSMUSG00000049807.17_97354208_97366239_1	chr11	+	1034	8	ISM	ENSMUSG00000049807.17	ENST00000621154.1	1769	15	9515	15817	9515	-15817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGCTGCTCCCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	97354207	97366239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149
ENSMUSG00000049807.17_97354361_97381976_1	chr11	+	1066	11	ISM	ENSMUSG00000049807.17	ENSMUST00000107601.8	5450	19	13375	11250	9668	-80	internal_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCCACAGTCGGTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	97354360	97381976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959
ENSMUSG00000049807.17_97354469_97382020_1	chr11	+	1002	11	ISM	ENSMUSG00000049807.17	ENSMUST00000107601.8	5450	19	13483	11206	9776	-36	internal_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCAGGACAGTGCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	97354468	97382020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959
ENSMUSG00000049848.8_19612039_19620568_1	chr7	-	613	5	NIC	ENSMUSG00000049848.8	novel	610	5	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTGCACAGAAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	19620568	19612038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_19612106_19612753_19612817_19615738_19615825_19616499_19616533_19620204
ENSMUSG00000049848.8_19612039_19620568_3	chr7	-	604	5	NNC	ENSMUSG00000049848.8	novel	610	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTGCACAGAAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	19620568	19612038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_19612106_19612753_19612811_19615741_19615825_19616499_19616533_19620204
ENSMUSG00000049848.8_19612039_19620568_5	chr7	-	603	5	NIC	ENSMUSG00000049848.8	novel	610	5	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTGCACAGAAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	19620568	19612038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_19612106_19612753_19612811_19615738_19615825_19616499_19616533_19620208
ENSMUSG00000049848.8_19612039_19620568_6	chr7	-	605	5	NNC	ENSMUSG00000049848.8	novel	610	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTGCACAGAAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	19620568	19612038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_19612106_19612755_19612811_19615738_19615825_19616499_19616533_19620204
ENSMUSG00000049848.8_19612039_19620568_7	chr7	-	600	5	NNC	ENSMUSG00000049848.8	novel	610	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1731	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTGCACAGAAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	19620568	19612038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_19612106_19612753_19612811_19615738_19615818_19616499_19616533_19620204
ENSMUSG00000049848.8_19612039_19620568_8	chr7	-	607	5	FSM	ENSMUSG00000049848.8	ENST00000358777.9	610	5	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTGCACAGAAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	19620568	19612038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_19612106_19612753_19612811_19615738_19615825_19616499_19616533_19620204
ENSMUSG00000049858.9_128507402_128508471_1	chr10	-	636	3	ISM	ENSMUSG00000049858.9	ENSMUST00000054764.9	2497	4	1471	1639	1471	-1639	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACCAAATCCTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	128508471	128507401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128507796_128507972_128508151_128508407
ENSMUSG00000049858.9_128507520_128509776_1	chr10	-	574	4	FSM	ENSMUSG00000049858.9	ENSMUST00000054764.9	2497	4	166	1757	166	-1757	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGGAAGCCTCTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	128509776	128507519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128507796_128507972_128508151_128508407_128508472_128509720
ENSMUSG00000049871.15_3765316_3776877_1	chr16	-	1096	13	ISM	ENSMUSG00000049871.15	ENST00000359128.10	3276	18	7428	-1	7428	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAAAGTTCCTGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	3776877	3765315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_3765404_3765689_3765774_3766123_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793
ENSMUSG00000049871.15_3765759_3780363_1	chr16	-	1069	14	ISM	ENSMUSG00000049871.15	ENST00000359128.10	3276	18	3942	442	3942	-442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGGATGGATGGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	3780363	3765758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_3765774_3766123_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3780317
ENSMUSG00000049871.15_3766177_3781435_1	chr16	-	1061	14	ISM	ENSMUSG00000049871.15	ENST00000359128.10	3276	18	2870	860	2870	-860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGCCTTGGCAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	3781435	3766176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3780317_3780405_3781416
ENSMUSG00000049871.15_3770320_3781715_1	chr16	-	1073	11	ISM	ENSMUSG00000049871.15	ENST00000359128.10	3276	18	2590	5003	2590	-5003	internal_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCAAGCTGGTGCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	3781715	3770319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3780317_3780405_3781416
ENSMUSG00000049871.15_3770727_3781830_1	chr16	-	1173	10	ISM	ENSMUSG00000049871.15	ENST00000359128.10	3276	18	2475	5410	2475	-5410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTCCCCTCCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	3781830	3770726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3780317_3780405_3781416
ENSMUSG00000049871.15_3772420_3782071_1	chr16	-	1162	7	ISM	ENSMUSG00000049871.15	ENST00000359128.10	3276	18	2234	7103	2234	-7103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTGCCTGGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	3782071	3772419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3780317_3780405_3781416
ENSMUSG00000049871.15_3776819_3782251_1	chr16	-	1065	4	ISM	ENSMUSG00000049871.15	ENST00000359128.10	3276	18	2054	11502	2054	-11502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCGAACGCTAACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	3782251	3776818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_3776878_3777254_3777339_3780317_3780405_3781416
ENSMUSG00000049871.15_3776855_3782320_1	chr16	-	1098	4	ISM	ENSMUSG00000049871.15	ENST00000359128.10	3276	18	1985	11538	1985	-11538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGGGGGCTAAGGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	3782320	3776854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_3776878_3777254_3777339_3780317_3780405_3781416
ENSMUSG00000049871.15_3782130_3783322_1	chr16	-	1096	2	ISM	ENSMUSG00000049871.15	ENST00000359128.10	3276	18	983	16813	983	-16813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGGCTGGTCAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	3783322	3782129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_3783167_3783263
ENSMUSG00000049871.15_3782194_3783360_1	chr16	-	1070	2	ISM	ENSMUSG00000049871.15	ENST00000359128.10	3276	18	945	16877	945	-16877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATCAAGCAGGTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	3783360	3782193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_3783167_3783263
ENSMUSG00000049871.15_3782308_3783504_1	chr16	-	1100	2	ISM	ENSMUSG00000049871.15	ENST00000359128.10	3276	18	801	16991	801	-16991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGCCGTCCAAGACATAG	NA	NA	NA	NA	NA	NA	NA	NA	3783504	3782307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_3783167_3783263
ENSMUSG00000049881.14_157240337_157247519_1	chr1	+	486	3	NNC	ENSMUSG00000049881.14	novel	1194	3	NA	NA	415	-203	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAATGGTGACAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	157240336	157247519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_157240696_157241319_157241366_157247438
ENSMUSG00000049881.14_157240548_157247806_1	chr1	+	568	3	FSM	ENSMUSG00000049881.14	ENSMUST00000061537.12	1194	3	626	0	626	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGCCCAGTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	157240547	157247806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_157240696_157241313_157241366_157247438
ENSMUSG00000049892.8_59854482_59855589_1	chr11	-	881	2	FSM	ENSMUSG00000049892.8	ENST00000579152.1	1191	2	99	211	99	-211	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACCTGCTGTGAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	59855589	59854481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_59855119_59855345
ENSMUSG00000049957.15_120348941_120355184_1	chr11	+	2773	6	NNC	ENSMUSG00000049957.15	novel	2778	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGAGAACATTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	120348940	120355184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_120349105_120349442_120349572_120350867_120351091_120352541_120352625_120352831_120352912_120353090
ENSMUSG00000049960.5_20441512_20443702_1	chr14	-	432	3	FSM	ENSMUSG00000049960.5	ENSMUST00000061444.5	2572	3	0	2140	0	-2140	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTTCATCCAATGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	20443702	20441511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_20441529_20441960_20442222_20443548
ENSMUSG00000049969.4_10990130_11007489_1	chr4	-	1322	2	FSM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	187	1468	187	-1468	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTGTCACTGAAATAAAC	NA	NA	NA	NA	NA	NA	NA	NA	11007489	10990129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_10991355_11007392
ENSMUSG00000049969.4_10990205_11007576_1	chr4	-	1334	2	FSM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	100	1543	100	-1543	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACAGAGCATGGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	11007576	10990204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_10991355_11007392
ENSMUSG00000049971.18_127727746_127784067_1	chr5	+	854	10	NNC	ENSMUSG00000049971.18	novel	856	10	NA	NA	1	1	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACGAACTTGGAGGATTA	NA	NA	NA	NA	NA	NA	NA	NA	127727745	127784067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_127727853_127734150_127734203_127740353_127740443_127741715_127741773_127754270_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
ENSMUSG00000049971.18_127727746_127784067_2	chr5	+	856	10	FSM	ENSMUSG00000049971.18	ENST00000537468.1	856	10	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACGAACTTGGAGGATTA	NA	NA	NA	NA	NA	NA	NA	NA	127727745	127784067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_127727853_127734150_127734203_127740353_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
ENSMUSG00000049985.16_112425478_112504735_1	chr13	+	1335	8	ISM	ENSMUSG00000049985.16	ENST00000504958.6	2188	10	31	15799	31	12020	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTGACACCAGGCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	112425477	112504735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112425517_112454958_112455082_112459585_112459717_112463662_112463773_112472748_112472810_112492439_112492625_112499948_112500117_112504217
ENSMUSG00000049985.16_112454988_112504883_1	chr13	+	1415	7	ISM	ENSMUSG00000049985.16	ENST00000504958.6	2188	10	29541	15651	0	12168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCCTTCATTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	112454987	112504883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112455082_112459585_112459717_112463662_112463773_112472748_112472810_112492439_112492625_112499948_112500117_112504217
ENSMUSG00000049985.16_112459584_112517755_1	chr13	+	1415	7	ISM	ENSMUSG00000049985.16	ENST00000504958.6	2188	10	34137	2779	4596	-2779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGACCGGAGGGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	112459583	112517755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112459717_112463662_112463773_112472748_112472810_112492439_112492625_112499948_112500117_112504217_112504883_112517662
ENSMUSG00000049985.16_112463662_112519996_1	chr13	+	1327	7	ISM	ENSMUSG00000049985.16	ENST00000504958.6	2188	10	38215	538	8674	-538	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAAGCCAGAGGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	112463661	112519996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112463773_112472748_112472810_112492439_112492625_112499948_112500117_112504217_112504883_112517662_112517756_112519952
ENSMUSG00000049985.16_112463662_112520130_1	chr13	+	1461	7	ISM	ENSMUSG00000049985.16	ENST00000504958.6	2188	10	38215	404	8674	-404	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAATGGAGAAGATATAT	NA	NA	NA	NA	NA	NA	NA	NA	112463661	112520130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112463773_112472748_112472810_112492439_112492625_112499948_112500117_112504217_112504883_112517662_112517756_112519952
ENSMUSG00000049985.16_112499946_112520423_1	chr13	+	1400	4	ISM	ENSMUSG00000049985.16	ENST00000504958.6	2188	10	74499	111	44958	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTTGGTCTGGTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	112499945	112520423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112500117_112504217_112504883_112517662_112517756_112519952
ENSMUSG00000049985.16_112504217_112520536_1	chr13	+	1343	3	ISM	ENSMUSG00000049985.16	ENST00000504958.6	2188	10	78770	-2	49229	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCTAAGACTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112504216	112520536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_112504883_112517662_112517756_112519952
ENSMUSG00000050017.12_111478629_111534949_1	chr5	+	1485	11	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	0	-1276	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCAAGTCACCACATAC	NA	NA	NA	NA	NA	NA	NA	NA	111478628	111534949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ENSMUSG00000050017.12_111486147_111534949_2	chr5	+	1304	8	NNC	ENSMUSG00000050017.12	novel	2632	11	NA	NA	7474	-1276	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCAAGTCACCACATAC	NA	NA	NA	NA	NA	NA	NA	NA	111486146	111534949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_111486299_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111534368
ENSMUSG00000050017.12_111494354_111535096_1	chr5	+	1371	8	NIC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	15681	-1129	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTCCAGCCAAATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	111494353	111535096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_+_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ENSMUSG00000050017.12_111495646_111535096_1	chr5	+	1200	6	ISM	ENSMUSG00000050017.12	ENSMUST00000200298.2	2632	11	16973	1129	16973	-1129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTCCAGCCAAATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	111495645	111535096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111534368
ENSMUSG00000050017.12_111495646_111535327_1	chr5	+	1516	7	ISM	ENSMUSG00000050017.12	ENSMUST00000086635.9	2761	12	17017	898	16973	-898	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGCAATTAACCTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	111495645	111535327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ENSMUSG00000050017.12_111519178_111535327_1	chr5	+	1271	4	ISM	ENSMUSG00000050017.12	ENSMUST00000200298.2	2632	11	40505	898	40505	-898	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGCAATTAACCTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	111519177	111535327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_111519256_111528057_111528169_111530853_111530977_111534368
ENSMUSG00000050017.12_111528035_111535494_1	chr5	+	1468	4	ISM	ENSMUSG00000050017.12	ENSMUST00000086635.9	2761	12	49406	731	49362	-731	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCCAGGCCAGGAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	111528034	111535494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_111528169_111530853_111530977_111533385_111533471_111534368
ENSMUSG00000050017.12_111530878_111535597_1	chr5	+	1413	3	ISM	ENSMUSG00000050017.12	ENSMUST00000086635.9	2761	12	52249	628	52205	-628	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCTCCTCATTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	111530877	111535597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_111530977_111533385_111533471_111534368
ENSMUSG00000050017.12_111530931_111535653_1	chr5	+	1416	3	ISM	ENSMUSG00000050017.12	ENSMUST00000086635.9	2761	12	52302	572	52258	-572	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTCCTCCTCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	111530930	111535653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_111530977_111533385_111533471_111534368
ENSMUSG00000050017.12_111533442_111535830_1	chr5	+	1491	2	ISM	ENSMUSG00000050017.12	ENSMUST00000086635.9	2761	12	54813	395	54769	-395	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGCACAGCACCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	111533441	111535830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_111533471_111534368
ENSMUSG00000050022.17_140726970_140735085_1	chr5	+	844	4	NNC	ENSMUSG00000050022.17	novel	875	4	NA	NA	31	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	4271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGGCGGGGAAGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	140726969	140735085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_140727343_140729771_140729940_140733897_140734027_140734911
ENSMUSG00000050022.17_140726970_140735085_2	chr5	+	846	4	FSM	ENSMUSG00000050022.17	ENST00000407112.1	875	4	31	-2	31	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGGCGGGGAAGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	140726969	140735085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_140727343_140729771_140729940_140733897_140734027_140734909
ENSMUSG00000050022.17_140726970_140735085_3	chr5	+	839	4	NNC	ENSMUSG00000050022.17	novel	875	4	NA	NA	31	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGGCGGGGAAGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	140726969	140735085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_140727343_140729778_140729940_140733897_140734027_140734909
ENSMUSG00000050029.8_50092789_50106789_1	chrX	-	3439	3	FSM	ENSMUSG00000050029.8	ENSMUST00000053593.8	3545	3	106	0	106	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACCAGTTATCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	50106789	50092788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_50095628_50103847_50104161_50106502
ENSMUSG00000050043.17_84501945_84509067_1	chr2	-	1892	9	FSM	ENSMUSG00000050043.17	ENSMUST00000111665.8	2282	9	105	285	105	-284	multi-exon	FALSE	canonical	NA	NA	NA	NA	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGTATGCATGTAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	84509067	84501944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194_84508519_84508986
ENSMUSG00000050043.17_84501976_84509072_1	chr2	-	1866	9	FSM	ENSMUSG00000050043.17	ENSMUST00000111665.8	2282	9	100	316	100	-315	multi-exon	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCCAACATCCGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	84509072	84501975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194_84508519_84508986
ENSMUSG00000050043.17_84501995_84509172_1	chr2	-	1947	9	FSM	ENSMUSG00000050043.17	ENSMUST00000111665.8	2282	9	0	335	0	-334	multi-exon	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTAACTCTAGTCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	84509172	84501994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194_84508519_84508986
ENSMUSG00000050043.17_84502017_84509172_1	chr2	-	1925	9	FSM	ENSMUSG00000050043.17	ENSMUST00000111665.8	2282	9	0	357	0	-356	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCACATAGAGGCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	84509172	84502016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194_84508519_84508986
ENSMUSG00000050043.17_84502022_84509172_1	chr2	-	1920	9	FSM	ENSMUSG00000050043.17	ENSMUST00000111665.8	2282	9	0	362	0	-361	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGCAGCACATAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	84509172	84502021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194_84508519_84508986
ENSMUSG00000050043.17_84502050_84509172_1	chr2	-	1892	9	FSM	ENSMUSG00000050043.17	ENSMUST00000111665.8	2282	9	0	390	0	-389	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTCTTCCAGAGGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	84509172	84502049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194_84508519_84508986
ENSMUSG00000050064.15_98335127_98335801_1	chr3	+	473	2	NNC	ENSMUSG00000050064.15	novel	605	2	NA	NA	64	-66	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCAAGAGCTTCATCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	98335126	98335801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_98335301_98335502
ENSMUSG00000050064.15_98335175_98335867_1	chr3	+	489	2	NNC	ENSMUSG00000050064.15	novel	605	2	NA	NA	112	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAAATGCGCGGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98335174	98335867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_98335290_98335493
ENSMUSG00000050064.15_98335182_98335862_1	chr3	+	481	2	FSM	ENSMUSG00000050064.15	ENST00000400451.7	605	2	119	5	119	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTCACAAATGCGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	98335181	98335862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_98335303_98335502
ENSMUSG00000050064.15_98335184_98335863_1	chr3	+	478	2	NNC	ENSMUSG00000050064.15	novel	605	2	NA	NA	121	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCACAAATGCGCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	98335183	98335863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_98335301_98335502
ENSMUSG00000050079.11_95328811_95349768_1	chr8	+	555	2	FSM	ENSMUSG00000050079.11	ENSMUST00000121101.2	3092	2	205	2332	117	-2332	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGACAATGTTGACACCC	NA	NA	NA	NA	NA	NA	NA	NA	95328810	95349768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_95329059_95349461
ENSMUSG00000050079.11_95328892_95349849_1	chr8	+	555	2	FSM	ENSMUSG00000050079.11	ENSMUST00000121101.2	3092	2	286	2251	198	-2251	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTCCGGCCTCCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	95328891	95349849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_95329059_95349461
ENSMUSG00000050079.11_95328961_95349921_1	chr8	+	558	2	FSM	ENSMUSG00000050079.11	ENSMUST00000121101.2	3092	2	355	2179	267	-2179	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGGACACACTGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	95328960	95349921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_95329059_95349461
ENSMUSG00000050079.11_95349573_95385408_1	chr8	+	1752	14	ISM	ENSMUSG00000050079.11	ENSMUST00000211983.2	3397	15	20879	1495	20879	-973	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTCTCATATTTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	95349572	95385408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ENSMUSG00000050079.11_95349677_95358808_1	chr8	+	578	4	ISM	ENSMUSG00000050079.11	ENSMUST00000211983.2	3397	15	20983	28095	20983	6708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAACTCCAGCACATGCT	NA	NA	NA	NA	NA	NA	NA	NA	95349676	95358808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95349964_95355683_95355737_95356377_95356491_95358683
ENSMUSG00000050079.11_95349701_95385540_1	chr8	+	1756	14	ISM	ENSMUSG00000050079.11	ENSMUST00000211983.2	3397	15	21007	1363	21007	-841	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGGCCAGATTTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	95349700	95385540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ENSMUSG00000050079.11_95363278_95386257_1	chr8	+	1765	8	ISM	ENSMUSG00000050079.11	ENSMUST00000212729.2	2800	14	34685	124	34584	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTAATCAGTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	95363277	95386257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ENSMUSG00000050079.11_95373241_95386640_1	chr8	+	1753	5	ISM	ENSMUSG00000050079.11	ENSMUST00000211983.2	3397	15	44547	263	44547	259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGCACATCCTATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	95373240	95386640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ENSMUSG00000050079.11_95376882_95386903_1	chr8	+	1771	3	ISM	ENSMUSG00000050079.11	ENSMUST00000211983.2	3397	15	48188	0	48188	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTCACAGCTCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	95376881	95386903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95376976_95380854_95380960_95385331
ENSMUSG00000050088.10_15163492_15164070_1	chr17	+	332	2	FSM	ENSMUSG00000050088.10	ENSMUST00000052691.9	2506	2	46	2128	0	-1178	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGGGGATGCGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	15163491	15164070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_15163582_15163828
ENSMUSG00000050150.17_135077741_135099761_1	chr3	+	781	7	ISM	ENSMUSG00000050150.17	ENST00000394789.7	1191	9	85	17232	85	-3827	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCGCTTCTTTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	135077740	135099761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097860_135098011_135099720
ENSMUSG00000050150.17_135078886_135100620_1	chr3	+	823	7	ISM	ENSMUSG00000050150.17	ENST00000394789.7	1191	9	1230	16373	1230	-2968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTTTGGCACTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	135078885	135100620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097860_135098011_135099720_135099830_135100604
ENSMUSG00000050150.17_135078953_135100660_1	chr3	+	796	7	ISM	ENSMUSG00000050150.17	ENST00000394789.7	1191	9	1297	16333	1297	-2928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGATGTCTTTTGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	135078952	135100660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097860_135098011_135099720_135099830_135100604
ENSMUSG00000050150.17_135079006_135100716_1	chr3	+	799	7	ISM	ENSMUSG00000050150.17	ENST00000394789.7	1191	9	1350	16277	1350	-2872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGATCCCTAAAGCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	135079005	135100716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097860_135098011_135099720_135099830_135100604
ENSMUSG00000050150.17_135080109_135116921_1	chr3	+	781	7	ISM	ENSMUSG00000050150.17	ENST00000394789.7	1191	9	2453	72	2453	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGCGAGGTAGCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	135080108	135116921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135080163_135088446_135088623_135096182_135096290_135097860_135098011_135099720_135099830_135100604_135100742_135116873
ENSMUSG00000050164.12_81119700_81122383_1	chr15	+	1029	3	FSM	ENSMUSG00000050164.12	ENST00000381433.2	1047	3	18	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTACCCTGGGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	81119699	81122383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_81120057_81121333_81121510_81121887
ENSMUSG00000050192.9_28836178_28848603_1	chr3	+	444	4	FSM	ENSMUSG00000050192.9	ENST00000474096.5	459	4	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGCCCTGCAAATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	28836177	28848603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_28836366_28836876_28836982_28847873_28847966_28848544
ENSMUSG00000050199.14_109748535_109827117_1	chr2	+	407	3	FSM	ENSMUSG00000050199.14	ENST00000480977.2	488	3	81	0	81	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCTTAACCTTTTTACTC	NA	NA	NA	NA	NA	NA	NA	NA	109748534	109827117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_109748651_109801036_109801109_109826898
ENSMUSG00000050212.5_126041796_126043277_1	chr4	+	965	3	NNC	ENSMUSG00000050212.5	novel	1364	3	NA	NA	0	-381	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGCCCCTTAGTGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	126041795	126043277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_126042425_126042751_126042839_126043028
ENSMUSG00000050212.5_126042208_126043668_1	chr4	+	952	3	FSM	ENSMUSG00000050212.5	ENSMUST00000106152.3	1364	3	412	0	-117	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCTCACTGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	126042207	126043668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_126042425_126042743_126042839_126043028
ENSMUSG00000050212.5_126042325_126043668_1	chr4	+	835	3	FSM	ENSMUSG00000050212.5	ENSMUST00000106152.3	1364	3	529	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCTCACTGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	126042324	126043668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_126042425_126042743_126042839_126043028
ENSMUSG00000050213.7_124960495_124967674_1	chr4	+	2154	4	FSM	ENSMUSG00000050213.7	ENSMUST00000052183.7	2345	4	30	161	30	-161	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTGCTTCAGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	124960494	124967674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_124960746_124961882_124961986_124964899_124965484_124966458
ENSMUSG00000050213.7_124961882_124967835_1	chr4	+	2065	3	ISM	ENSMUSG00000050213.7	ENSMUST00000052183.7	2345	4	1417	0	1417	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGAGGGTATTACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	124961881	124967835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_124961986_124964899_124965484_124966458
ENSMUSG00000050248.12_37514801_37576608_1	chr5	+	2574	13	ISM	ENSMUSG00000050248.12	ENSMUST00000056365.9	4091	20	18958	5791	18958	-5791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCACACAGCTGAGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	37514800	37576608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37567577_37567806_37573070_37573292_37574748_37574837_37576467
ENSMUSG00000050248.12_37527970_37581912_1	chr5	+	2578	13	ISM	ENSMUSG00000050248.12	ENSMUST00000056365.9	4091	20	32127	487	32127	-487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTCAGAAGCCCAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	37527969	37581912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37567577_37567806_37573070_37573292_37574748_37574837_37576467_37576671_37579181_37579284_37581752
ENSMUSG00000050248.12_37528027_37581989_1	chr5	+	2598	13	ISM	ENSMUSG00000050248.12	ENSMUST00000056365.9	4091	20	32184	410	32184	-410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCCAACAGGGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	37528026	37581989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37567577_37567806_37573070_37573292_37574748_37574837_37576467_37576671_37579181_37579284_37581752
ENSMUSG00000050248.12_37535572_37582169_1	chr5	+	2567	12	ISM	ENSMUSG00000050248.12	ENSMUST00000056365.9	4091	20	39729	230	39729	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTCCAGTCTCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	37535571	37582169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37567577_37567806_37573070_37573292_37574748_37574837_37576467_37576671_37579181_37579284_37581752
ENSMUSG00000050310.10_6813038_6816054_1	chr15	+	536	3	ISM	ENSMUSG00000050310.10	ENST00000296782.9	7369	39	75176	11811	75174	-11811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGCAGTAGCAGTGATCCA	NA	NA	NA	NA	NA	NA	NA	NA	6813037	6816054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_6813146_6813412_6813643_6815856
ENSMUSG00000050315.15_122873637_122914921_1	chr3	-	425	2	ISM	ENSMUSG00000050315.15	ENST00000448416.6	872	3	114807	272	-4220	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGAAAGAGAGACTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	122914921	122873636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_122873908_122914767
ENSMUSG00000050315.15_122873789_123029745_1	chr3	-	465	3	FSM	ENSMUSG00000050315.15	ENST00000448416.6	872	3	-17	424	0	-424	multi-exon	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTAACAAGAGACCGACAC	NA	NA	NA	NA	NA	NA	NA	NA	123029745	122873788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_122873908_122914767_122914920_123029551
ENSMUSG00000050321.4_86413845_86517193_1	chr18	+	1672	9	ISM	ENSMUSG00000050321.4	ENST00000583169.5	2210	11	90	7687	90	-7650	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCTATCCAGACACGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86413844	86517193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_86414036_86416082_86416137_86416376_86416515_86422764_86423014_86479166_86479209_86479324_86479453_86491739_86491969_86512874_86512989_86516666
ENSMUSG00000050321.4_86413946_86524592_1	chr18	+	1731	11	FSM	ENSMUSG00000050321.4	ENST00000583169.5	2210	11	191	288	191	-251	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTTATACCGAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	86413945	86524592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_86414036_86416082_86416137_86416376_86416515_86422764_86423014_86479166_86479209_86479324_86479453_86491739_86491969_86512874_86512989_86516666_86517226_86518137_86518212_86524538
ENSMUSG00000050321.4_86422763_86524880_2	chr18	+	1739	8	ISM	ENSMUSG00000050321.4	ENST00000583169.5	2210	11	9008	0	9008	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCTACGCATCTATAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	86422762	86524880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_86423014_86479166_86479209_86479324_86479453_86491739_86491969_86512874_86512989_86516666_86517226_86518137_86518212_86524538
ENSMUSG00000050323.15_11051045_11066707_1	chr4	-	634	6	ISM	ENSMUSG00000050323.15	ENSMUST00000058183.9	1082	9	9497	0	6538	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1819	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGGTCTGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	11066707	11051044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650
ENSMUSG00000050323.15_11053430_11066707_1	chr4	-	455	5	ISM	ENSMUSG00000050323.15	ENST00000396111.6	684	7	6538	0	6538	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1734	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCTTCAGTGGAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	11066707	11053429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650
ENSMUSG00000050323.15_11059073_11070322_1	chr4	-	458	5	ISM	ENSMUSG00000050323.15	ENST00000396111.6	684	7	2923	5643	2923	-5643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATGTGAGAGATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	11070322	11059072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199
ENSMUSG00000050323.15_11059073_11070323_1	chr4	-	453	5	NNC	ENSMUSG00000050323.15	novel	684	7	NA	NA	2922	-5643	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATGTGAGAGATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	11070323	11059072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_11059114_11060866_11060995_11062049_11062153_11066650_11066708_11070199
ENSMUSG00000050323.15_11059073_11073215_1	chr4	-	534	6	ISM	ENSMUSG00000050323.15	ENST00000396111.6	684	7	30	5643	30	-5643	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1491	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATGTGAGAGATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	11073215	11059072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073139
ENSMUSG00000050323.15_11060908_11073203_1	chr4	-	434	5	ISM	ENSMUSG00000050323.15	ENST00000396111.6	684	7	42	7478	42	-7478	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTAGCAGGAGACAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	11073203	11060907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073139
ENSMUSG00000050335.18_47611270_47617589_1	chr14	+	242	3	ISM	ENSMUSG00000050335.18	ENSMUST00000142734.8	1419	6	0	6028	0	-5662	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTACCCAGGGGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	47611269	47617589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_47611410_47616979_47617002_47617509
ENSMUSG00000050335.18_47611373_47623034_1	chr14	+	738	5	NIC	ENSMUSG00000050335.18	novel	1298	6	NA	NA	27	-217	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	3969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGCAGTACAACCATC	NA	NA	NA	NA	NA	NA	NA	NA	47611372	47623034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_+_47611437_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ENSMUSG00000050335.18_47611373_47623034_2	chr14	+	760	6	FSM	ENSMUSG00000050335.18	ENSMUST00000150290.9	1298	6	27	511	27	-217	multi-exon	FALSE	canonical	NA	NA	NA	NA	5040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGCAGTACAACCATC	NA	NA	NA	NA	NA	NA	NA	NA	47611372	47623034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_47611437_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ENSMUSG00000050335.18_47611421_47623251_1	chr14	+	1073	5	NNC	ENSMUSG00000050335.18	novel	1072	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACCCATCGCTTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	47611420	47623251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_47611603_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ENSMUSG00000050335.18_47617801_47622121_1	chr14	+	227	3	ISM	ENSMUSG00000050335.18	ENSMUST00000146468.4	1072	6	6380	1130	6380	-1130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAACAGGAGAGTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	47617800	47622121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_47617876_47619052_47619142_47622058
ENSMUSG00000050335.18_47619052_47622224_1	chr14	+	256	2	ISM	ENSMUSG00000050335.18	ENSMUST00000146468.4	1072	6	7631	1027	7631	-1027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTGGGGCTTTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	47619051	47622224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_47619142_47622058
ENSMUSG00000050335.18_47619052_47623546_1	chr14	+	821	3	ISM	ENSMUSG00000050335.18	ENSMUST00000150290.9	1298	6	7706	-1	7631	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCTTTGATTTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	47619051	47623546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_47619142_47622058_47622225_47622981
ENSMUSG00000050335.18_47622053_47623034_1	chr14	+	225	2	ISM	ENSMUSG00000050335.18	ENSMUST00000146468.4	1072	6	10632	217	10632	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGCAGTACAACCATC	NA	NA	NA	NA	NA	NA	NA	NA	47622052	47623034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_47622225_47622981
ENSMUSG00000050357.10_106413259_106416017_1	chr8	+	1003	13	ISM	ENSMUSG00000050357.10	ENST00000545661.5	4075	37	69	8758	69	-8758	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATCTTGCAGGCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	106413258	106416017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975
ENSMUSG00000050357.10_106413377_106416260_1	chr8	+	1092	13	ISM	ENSMUSG00000050357.10	ENST00000545661.5	4075	37	187	8515	187	-8515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGGCACCAGGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	106413376	106416260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183
ENSMUSG00000050357.10_106413377_106419596_1	chr8	+	2474	23	ISM	ENSMUSG00000050357.10	ENST00000334583.11	4329	37	187	5222	187	-5179	internal_fragment	TRUE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAAGCCCAACTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	106413376	106419596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434
ENSMUSG00000050357.10_106414275_106419920_1	chr8	+	2389	23	ISM	ENSMUSG00000050357.10	ENST00000334583.11	4329	37	1085	4898	1085	-4855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCCCCTGCTGTACCACC	NA	NA	NA	NA	NA	NA	NA	NA	106414274	106419920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887
ENSMUSG00000050357.10_106414284_106416671_1	chr8	+	1024	13	ISM	ENSMUSG00000050357.10	ENST00000545661.5	4075	37	1094	8104	1094	-8104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCACCTAGACCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	106414283	106416671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630
ENSMUSG00000050357.10_106414415_106416896_1	chr8	+	1110	13	ISM	ENSMUSG00000050357.10	ENST00000545661.5	4075	37	1225	7879	1225	-7879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCCGCCAGGGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	106414414	106416896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814
ENSMUSG00000050357.10_106414415_106420033_1	chr8	+	2468	22	ISM	ENSMUSG00000050357.10	ENST00000334583.11	4329	37	1225	4785	1225	-4742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTCAGAATTTCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	106414414	106420033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887
ENSMUSG00000050357.10_106414701_106420225_1	chr8	+	2440	22	ISM	ENSMUSG00000050357.10	ENST00000334583.11	4329	37	1511	4593	1511	-4550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGGCCCTGGAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	106414700	106420225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156
ENSMUSG00000050357.10_106414916_106420704_1	chr8	+	2399	22	ISM	ENSMUSG00000050357.10	ENST00000334583.11	4329	37	1726	4114	1726	-4071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCAGGCTGGGCCGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	106414915	106420704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645
ENSMUSG00000050357.10_106415132_106417408_1	chr8	+	1022	13	ISM	ENSMUSG00000050357.10	ENST00000545661.5	4075	37	1942	7367	1942	-7367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTGAAGCAGGGTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	106415131	106417408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378
ENSMUSG00000050357.10_106415154_106420854_1	chr8	+	2444	21	ISM	ENSMUSG00000050357.10	ENST00000334583.11	4329	37	1964	3964	1964	-3921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCCCGCCGCCGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	106415153	106420854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645
ENSMUSG00000050357.10_106415426_106421757_1	chr8	+	2465	20	ISM	ENSMUSG00000050357.10	ENST00000334583.11	4329	37	2236	3061	2236	-3018	internal_fragment	TRUE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGAGGGTCGGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	106415425	106421757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106415522_106415595_106415683_106415767_106415881_106415975_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656
ENSMUSG00000050357.10_106415505_106417775_1	chr8	+	1018	12	ISM	ENSMUSG00000050357.10	ENST00000545661.5	4075	37	2315	7000	2315	-7000	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAACAGAACCACAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	106415504	106417775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714
ENSMUSG00000050357.10_106415594_106417877_1	chr8	+	1105	11	ISM	ENSMUSG00000050357.10	ENST00000545661.5	4075	37	2404	6898	2404	-6898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGGTCCGCGCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	106415593	106417877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714
ENSMUSG00000050357.10_106415632_106421901_1	chr8	+	2395	20	ISM	ENSMUSG00000050357.10	ENST00000334583.11	4329	37	2442	2917	2442	-2874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAGCTGGGTACGCTC	NA	NA	NA	NA	NA	NA	NA	NA	106415631	106421901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106415683_106415767_106415881_106415975_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839
ENSMUSG00000050357.10_106415766_106418057_1	chr8	+	1117	11	ISM	ENSMUSG00000050357.10	ENST00000545661.5	4075	37	2576	6718	2576	-6718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTGCCCCTTGCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	106415765	106418057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958
ENSMUSG00000050357.10_106415988_106418962_1	chr8	+	1020	11	ISM	ENSMUSG00000050357.10	ENST00000545661.5	4075	37	2798	5813	2798	-5813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATATGGAGCTGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	106415987	106418962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932
ENSMUSG00000050357.10_106416007_106422098_1	chr8	+	2397	18	ISM	ENSMUSG00000050357.10	ENST00000334583.11	4329	37	2817	2720	2817	-2677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCGCAGAAATCGGCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	106416006	106422098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839
ENSMUSG00000050357.10_106416183_106422406_1	chr8	+	2446	19	ISM	ENSMUSG00000050357.10	ENST00000545661.5	4075	37	2993	2369	2993	-2369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTGGGGGTGAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	106416182	106422406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283
ENSMUSG00000050357.10_106416351_106423727_1	chr8	+	2482	20	ISM	ENSMUSG00000050357.10	ENST00000545661.5	4075	37	3161	1048	3161	-1048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGAGGGCCACTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	106416350	106423727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655
ENSMUSG00000050357.10_106416843_106423969_1	chr8	+	2395	19	ISM	ENSMUSG00000050357.10	ENST00000545661.5	4075	37	3653	806	3653	-806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCCTCCCCATGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	106416842	106423969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848
ENSMUSG00000050357.10_106417009_106424070_1	chr8	+	2443	18	ISM	ENSMUSG00000050357.10	ENST00000545661.5	4075	37	3819	705	3819	-705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTAGGCACCCCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	106417008	106424070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848
ENSMUSG00000050357.10_106417379_106424577_1	chr8	+	2446	18	ISM	ENSMUSG00000050357.10	ENST00000334583.11	4329	37	4189	241	4189	-198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGTGGGCACGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	106417378	106424577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499
ENSMUSG00000050357.10_106417538_106424776_1	chr8	+	2401	19	ISM	ENSMUSG00000050357.10	ENST00000334583.11	4329	37	4348	42	4348	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCCTCCTGCCGCAT	NA	NA	NA	NA	NA	NA	NA	NA	106417537	106424776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ENSMUSG00000050357.10_106421696_106424776_1	chr8	+	1069	8	ISM	ENSMUSG00000050357.10	ENST00000545661.5	4075	37	8506	-1	8506	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCCTCCTGCCGCAT	NA	NA	NA	NA	NA	NA	NA	NA	106421695	106424776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424499_106424578_106424662
ENSMUSG00000050373.14_164627937_164634035_1	chr2	+	869	3	FSM	ENSMUSG00000050373.14	ENSMUST00000056181.7	2590	3	26	1695	0	-372	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTGGCTGGGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	164627936	164634035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_164628245_164628617_164628776_164633632
ENSMUSG00000050373.14_164628084_164634138_1	chr2	+	825	3	FSM	ENSMUSG00000050373.14	ENSMUST00000056181.7	2590	3	173	1592	147	-269	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTTTCCTGGCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	164628083	164634138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_164628245_164628617_164628776_164633632
ENSMUSG00000050373.14_164628157_164634193_1	chr2	+	807	3	FSM	ENSMUSG00000050373.14	ENSMUST00000056181.7	2590	3	246	1537	220	-214	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTGGACAAACGGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	164628156	164634193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_164628245_164628617_164628776_164633632
ENSMUSG00000050373.14_164628714_164634407_1	chr2	+	837	2	ISM	ENSMUSG00000050373.14	ENSMUST00000056181.7	2590	3	803	1323	777	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTCTGCAGCAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	164628713	164634407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_164628776_164633632
ENSMUSG00000050377.9_112660419_112695767_1	chr13	-	1531	9	NNC	ENSMUSG00000050377.9	novel	1541	9	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTCAGAAACTGAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	112695767	112660418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_112660905_112662367_112662450_112663993_112664088_112666812_112666954_112668201_112668349_112669444_112669547_112670269_112670456_112677603_112677811_112695681
ENSMUSG00000050377.9_112660419_112695767_2	chr13	-	1533	9	FSM	ENSMUSG00000050377.9	ENST00000297015.7	1541	9	9	-1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTCAGAAACTGAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	112695767	112660418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_112660905_112662367_112662450_112663993_112664088_112666812_112666954_112668201_112668349_112669444_112669547_112670269_112670456_112677603_112677813_112695681
ENSMUSG00000050379.16_36176037_36193797_1	chrX	-	1286	5	ISM	ENSMUSG00000050379.16	ENST00000360156.11	2596	11	59526	138	59512	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCTCAAAGGTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	36193797	36176036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_36176908_36184021_36184067_36186492_36186684_36190434_36190568_36193751
ENSMUSG00000050379.16_36176095_36193868_1	chrX	-	1299	5	ISM	ENSMUSG00000050379.16	ENST00000360156.11	2596	11	59455	196	59441	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTTTGCATGTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	36193868	36176094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_36176908_36184021_36184067_36186492_36186684_36190434_36190568_36193751
ENSMUSG00000050379.16_36176228_36198095_1	chrX	-	1277	6	ISM	ENSMUSG00000050379.16	ENST00000360156.11	2596	11	55228	329	55214	-329	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGCTTTGATGGCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	36198095	36176227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_36176908_36184021_36184067_36186492_36186684_36190434_36190568_36193751_36193921_36198036
ENSMUSG00000050379.16_36176440_36210258_1	chrX	-	1303	8	ISM	ENSMUSG00000050379.16	ENST00000360156.11	2596	11	43065	541	43051	-541	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTTGAGTGGCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	36210258	36176439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_36176908_36184021_36184067_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220
ENSMUSG00000050379.16_36176502_36210303_1	chrX	-	1286	8	ISM	ENSMUSG00000050379.16	ENST00000360156.11	2596	11	43020	603	43006	597	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTGGTTCAGTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	36210303	36176501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_36176908_36184021_36184067_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220
ENSMUSG00000050379.16_36176672_36230340_1	chrX	-	1312	9	ISM	ENSMUSG00000050379.16	ENST00000360156.11	2596	11	22983	773	22969	427	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGGCAGGAAAAGAATCA	NA	NA	NA	NA	NA	NA	NA	NA	36230340	36176671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_36176908_36184021_36184067_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248
ENSMUSG00000050379.16_36176766_36230394_1	chrX	-	1272	9	ISM	ENSMUSG00000050379.16	ENST00000360156.11	2596	11	22929	867	22915	333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAACAAGTGTACATGT	NA	NA	NA	NA	NA	NA	NA	NA	36230394	36176765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_36176908_36184021_36184067_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248
ENSMUSG00000050379.16_36176846_36230445_1	chrX	-	1243	9	ISM	ENSMUSG00000050379.16	ENST00000360156.11	2596	11	22878	947	22864	253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTAGTTAGGGCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	36230445	36176845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_36176908_36184021_36184067_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248
ENSMUSG00000050379.16_36180051_36198085_1	chrX	-	735	6	ISM	ENSMUSG00000050379.16	ENSMUST00000053456.11	4673	11	55224	2952	55224	-1367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGTCTGGTTCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	36198085	36180050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_36180199_36184021_36184067_36186492_36186684_36190434_36190568_36193751_36193921_36198036
ENSMUSG00000050379.16_36184022_36238830_1	chrX	-	1295	9	ISM	ENSMUSG00000050379.16	ENSMUST00000053456.11	4673	11	14479	6923	14479	-5338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCTTTATTAACTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	36238830	36184021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_36184067_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715
ENSMUSG00000050379.16_36186526_36253144_1	chrX	-	1330	9	ISM	ENSMUSG00000050379.16	ENSMUST00000115239.10	1845	10	165	7842	165	-7842	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACTCTGAAAAGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	36253144	36186525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ENSMUSG00000050379.16_36186585_36253144_1	chrX	-	1271	9	ISM	ENSMUSG00000050379.16	ENSMUST00000115239.10	1845	10	165	7901	165	-7901	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGAGAAAGGCGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	36253144	36186584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ENSMUSG00000050379.16_36186643_36253215_1	chrX	-	1284	9	ISM	ENSMUSG00000050379.16	ENSMUST00000115239.10	1845	10	94	7959	94	-7959	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAGAAGAAGCTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	36253215	36186642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ENSMUSG00000050382.15_79348529_79349185_1	chr7	-	333	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	14721	393	14721	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTTGGTCCATGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	79349185	79348528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79348664_79348897_79349045_79349134
ENSMUSG00000050382.15_79348578_79349237_1	chr7	-	336	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	14669	442	14669	-302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGTCCTCCCTTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	79349237	79348577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79348664_79348897_79349045_79349134
ENSMUSG00000050382.15_79348643_79349275_1	chr7	-	309	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	14631	507	14631	-367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTGGAAAACAGACAATGC	NA	NA	NA	NA	NA	NA	NA	NA	79349275	79348642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79348664_79348897_79349045_79349134
ENSMUSG00000050382.15_79348990_79349976_1	chr7	-	301	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	13930	854	13930	-714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTCTGGAGAAGGAACTAG	NA	NA	NA	NA	NA	NA	NA	NA	79349976	79348989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79349045_79349134_79349334_79349929
ENSMUSG00000050382.15_79349299_79350756_1	chr7	-	302	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	13150	1163	13150	-1023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCCTTCTCGGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	79350756	79349298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79349334_79349929_79350137_79350696
ENSMUSG00000050382.15_79350081_79351886_1	chr7	-	305	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	12020	1945	12020	-1805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAGTACAAGAATGAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	79351886	79350080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79350137_79350696_79350913_79351853
ENSMUSG00000050382.15_79350784_79352224_1	chr7	-	330	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	11682	2648	11682	-2508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTGCGCCAAGAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	79352224	79350783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79350913_79351853_79352031_79352200
ENSMUSG00000050382.15_79350848_79352281_1	chr7	-	323	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	11625	2712	11625	-2572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTGGGCAGCTGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	79352281	79350847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79350913_79351853_79352031_79352200
ENSMUSG00000050382.15_79351908_79352572_1	chr7	-	295	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	11334	3772	11334	-3632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGATGCAGGAGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	79352572	79351907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79352031_79352200_79352327_79352526
ENSMUSG00000050382.15_79351961_79352626_1	chr7	-	296	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	11280	3825	11280	-3685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTTGGGAGAGGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	79352626	79351960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79352031_79352200_79352327_79352526
ENSMUSG00000050382.15_79352012_79352682_1	chr7	-	301	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	11224	3876	11224	-3736	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCTGGACCAGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	79352682	79352011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79352031_79352200_79352327_79352526
ENSMUSG00000050382.15_79352281_79354425_1	chr7	-	295	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	9481	4145	9481	-4005	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGAAGAGATTGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	79354425	79352280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79352327_79352526_79352725_79354374
ENSMUSG00000050382.15_79352671_79356543_1	chr7	-	317	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	7363	4535	7363	-4395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGACTCGGCTACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	79356543	79352670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79352725_79354374_79354578_79356483
ENSMUSG00000050382.15_79354451_79356757_1	chr7	-	301	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	7149	6315	7149	-6175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCAAGATGCCAGCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	79356757	79354450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79354578_79356483_79356637_79356736
ENSMUSG00000050382.15_79354497_79356816_1	chr7	-	314	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	7090	6361	7090	-6221	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGTGAAGGGCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	79356816	79354496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79354578_79356483_79356637_79356736
ENSMUSG00000050382.15_79354565_79356852_1	chr7	-	282	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	7054	6429	7054	-6289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCCTGAACCGTCAACACA	NA	NA	NA	NA	NA	NA	NA	NA	79356852	79354564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79354578_79356483_79356637_79356736
ENSMUSG00000050382.15_79356483_79357291_1	chr7	-	294	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	6615	8347	6615	-8207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGGGGGCATTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	79357291	79356482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79356637_79356736_79356853_79357267
ENSMUSG00000050382.15_79356528_79357352_1	chr7	-	310	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	6554	8392	6554	-8252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCGCATGAAGGAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	79357352	79356527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79356637_79356736_79356853_79357267
ENSMUSG00000050382.15_79356591_79357393_1	chr7	-	288	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	6513	8455	6513	-8315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGGCCTCTGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	79357393	79356590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79356637_79356736_79356853_79357267
ENSMUSG00000050382.15_79356737_79358187_1	chr7	-	300	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	5719	8601	5719	-8461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCTGGGTGGGGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	79358187	79356736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79356853_79357267_79357426_79358161
ENSMUSG00000050382.15_79356790_79358240_1	chr7	-	300	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	5666	8654	5666	-8514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCAGAGGTCTGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	79358240	79356789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79356853_79357267_79357426_79358161
ENSMUSG00000050382.15_79356837_79358304_1	chr7	-	317	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	5602	8701	5602	-8561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTCAGAGGGCAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	79358304	79356836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79356853_79357267_79357426_79358161
ENSMUSG00000050382.15_79357382_79358969_1	chr7	-	327	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	4937	9246	4937	-9106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGGACAAATTGAGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	79358969	79357381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79357426_79358161_79358389_79358913
ENSMUSG00000050382.15_79358230_79359828_1	chr7	-	312	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	4078	10094	4078	-9954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGCTGGGCATGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	79359828	79358229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79358389_79358913_79359031_79359792
ENSMUSG00000050382.15_79358278_79359888_1	chr7	-	324	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	4018	10142	4018	-10002	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGTGCCCCGGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	79359888	79358277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79358389_79358913_79359031_79359792
ENSMUSG00000050382.15_79358335_79359937_1	chr7	-	316	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	3969	10199	3969	-10059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGCACAGCCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79359937	79358334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79358389_79358913_79359031_79359792
ENSMUSG00000050382.15_79359010_79360070_1	chr7	-	299	2	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	3836	10874	3836	-10734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGACCCTGCAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	79360070	79359009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79359031_79359792
ENSMUSG00000050382.15_79360282_79360688_1	chr7	-	269	2	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	3218	12146	3218	-12006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTGATGATCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	79360688	79360281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79360313_79360450
ENSMUSG00000050382.15_79360625_79361240_1	chr7	-	300	2	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	2666	12489	2666	-12349	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGACCTGGCAGGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	79361240	79360624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79360845_79361160
ENSMUSG00000050382.15_79360796_79363654_1	chr7	-	326	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	252	12660	252	-12520	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCCTAGAGATGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	79363654	79360795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79360845_79361160_79361362_79363578
ENSMUSG00000050382.15_79361274_79363796_1	chr7	-	306	2	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	110	13138	110	-12998	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGCATGTATCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	79363796	79361273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79361362_79363578
ENSMUSG00000050390.13_129114961_129119807_1	chr4	-	659	4	FSM	ENSMUSG00000050390.13	ENST00000294521.7	658	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGGCCCCCAAGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	129119807	129114960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129115271_129119144_129119266_129119499_129119556_129119635
ENSMUSG00000050390.13_129114961_129119807_2	chr4	-	651	4	NNC	ENSMUSG00000050390.13	novel	658	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGGCCCCCAAGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	129119807	129114960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_129115263_129119144_129119266_129119499_129119556_129119635
ENSMUSG00000050390.13_129114961_129119807_3	chr4	-	655	4	NNC	ENSMUSG00000050390.13	novel	658	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGGCCCCCAAGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	129119807	129114960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_129115271_129119144_129119266_129119499_129119552_129119635
ENSMUSG00000050390.13_129114961_129119807_4	chr4	-	657	4	NNC	ENSMUSG00000050390.13	novel	658	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	905	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGGCCCCCAAGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	129119807	129114960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_129115271_129119146_129119266_129119499_129119556_129119635
ENSMUSG00000050390.13_129114961_129119807_5	chr4	-	658	4	NNC	ENSMUSG00000050390.13	novel	658	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGGCCCCCAAGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	129119807	129114960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_129115271_129119144_129119266_129119500_129119556_129119635
ENSMUSG00000050390.13_129114961_129119807_6	chr4	-	650	4	NNC	ENSMUSG00000050390.13	novel	658	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGGCCCCCAAGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	129119807	129114960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_129115271_129119144_129119257_129119499_129119556_129119635
ENSMUSG00000050394.15_133649210_133652080_1	chrX	-	1695	3	FSM	ENSMUSG00000050394.15	ENST00000538627.5	1798	3	114	-11	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGGCACTGGCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	133652080	133649209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_133649587_133649658_133650975_133652078
ENSMUSG00000050394.15_133649210_133652080_2	chrX	-	1689	3	NNC	ENSMUSG00000050394.15	novel	1798	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGGCACTGGCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	133652080	133649209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_133649581_133649658_133650975_133652078
ENSMUSG00000050394.15_133649210_133652190_1	chrX	-	1805	3	FSM	ENSMUSG00000050394.15	ENST00000538627.5	1798	3	4	-11	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGGCACTGGCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	133652190	133649209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_133649587_133649658_133650975_133652078
ENSMUSG00000050394.15_133649210_133652190_2	chrX	-	1806	3	NNC	ENSMUSG00000050394.15	novel	1798	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGGCACTGGCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	133652190	133649209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_133649581_133649651_133650975_133652078
ENSMUSG00000050394.15_133649210_133652190_3	chrX	-	1799	3	NNC	ENSMUSG00000050394.15	novel	1798	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1807	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGGCACTGGCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	133652190	133649209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_133649581_133649658_133650975_133652078
ENSMUSG00000050410.16_35823631_35827059_1	chr17	-	1283	3	ISM	ENSMUSG00000050410.16	ENSMUST00000160885.2	1732	4	623	-3	623	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCGTTGAATCTAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	35827059	35823630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35824082_35825370_35825918_35826774
ENSMUSG00000050410.16_35823786_35827158_1	chr17	-	1227	3	ISM	ENSMUSG00000050410.16	ENSMUST00000160885.2	1732	4	524	152	524	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGCATCGGCTAAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	35827158	35823785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35824082_35825370_35825918_35826774
ENSMUSG00000050410.16_35823786_35827327_1	chr17	-	1396	3	ISM	ENSMUSG00000050410.16	ENSMUST00000160885.2	1732	4	355	152	355	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGCATCGGCTAAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	35827327	35823785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35824082_35825370_35825918_35826774
ENSMUSG00000050410.16_35823894_35827682_1	chr17	-	1363	4	FSM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	39	263	0	-260	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCGGTCCCAGAAACCAT	NA	NA	NA	NA	NA	NA	NA	NA	35827682	35823893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_35824082_35825370_35825918_35826774_35827328_35827607
ENSMUSG00000050410.16_35823956_35827682_1	chr17	-	1301	4	FSM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	39	325	0	-322	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGCCCAGTCACAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	35827682	35823955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_35824082_35825370_35825918_35826774_35827328_35827607
ENSMUSG00000050410.16_35824018_35827721_1	chr17	-	1278	4	FSM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	0	387	0	-384	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTGACAGAAAAGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	35827721	35824017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_35824082_35825370_35825918_35826774_35827328_35827607
ENSMUSG00000050552.9_138253963_138254573_1	chr5	+	162	2	ISM	ENSMUSG00000050552.9	ENSMUST00000062067.8	877	4	219	3084	219	-2828	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGAAGGTGCAGTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	138253962	138254573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138254066_138254514
ENSMUSG00000050552.9_138254045_138256965_1	chr5	+	151	3	ISM	ENSMUSG00000050552.9	ENSMUST00000062067.8	877	4	301	692	301	-436	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTCAGCACAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	138254044	138256965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138254066_138254514_138254596_138256916
ENSMUSG00000050552.9_138254578_138257320_1	chr5	+	172	3	FSM	ENSMUSG00000050552.9	ENST00000460732.5	317	3	64	81	64	-81	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTGACTGTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	138254577	138257320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_138254596_138256916_138257052_138257301
ENSMUSG00000050552.9_138256994_138257408_1	chr5	+	165	2	ISM	ENSMUSG00000050552.9	ENST00000460732.5	317	3	2480	-7	2480	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACGGGCTGGAGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	138256993	138257408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138257052_138257301
ENSMUSG00000050552.9_138256994_138257408_2	chr5	+	148	2	ISM	ENSMUSG00000050552.9	ENSMUST00000062067.8	877	4	3250	249	2480	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACGGGCTGGAGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	138256993	138257408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138257035_138257301
ENSMUSG00000050552.9_138256994_138257408_3	chr5	+	164	2	NNC	ENSMUSG00000050552.9	novel	317	3	NA	NA	2480	7	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACGGGCTGGAGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	138256993	138257408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_138257052_138257302
ENSMUSG00000050555.10_35472116_35475476_1	chr9	-	1403	2	ISM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	6218	0	6218	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGAACCTTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	35475476	35472115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_35473401_35475358
ENSMUSG00000050555.10_35472217_35475476_1	chr9	-	1302	2	ISM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	6218	101	6218	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTAAACTGTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	35475476	35472216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_35473401_35475358
ENSMUSG00000050555.10_35472492_35481393_1	chr9	-	1296	4	FSM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	301	376	301	-376	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCGCTTTCTCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	35481393	35472491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_35473401_35475358_35475474_35479750_35479802_35481172
ENSMUSG00000050555.10_35472718_35481694_1	chr9	-	1371	4	FSM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	0	602	0	-602	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTACAAAAGAGACTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	35481694	35472717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_35473401_35475358_35475474_35479750_35479802_35481172
ENSMUSG00000050608.12_138831213_138858424_1	chr4	-	461	4	FSM	ENSMUSG00000050608.12	ENSMUST00000143971.2	2549	4	0	2088	0	-2088	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACGCTTTCAACTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	138858424	138831212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_138831324_138832300_138832411_138833166_138833215_138858232
ENSMUSG00000050612.7_65944502_65945652_1	chr17	-	1105	2	NNC	ENSMUSG00000050612.7	novel	1108	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1987	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTCGTTGATAGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	65945652	65944501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_65944858_65944903
ENSMUSG00000050612.7_65944502_65945652_2	chr17	-	1111	2	FSM	ENSMUSG00000050612.7	ENST00000357775.6	1108	2	0	-3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTCGTTGATAGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	65945652	65944501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_65944864_65944903
ENSMUSG00000050619.15_120991177_120994361_1	chr2	-	988	2	ISM	ENSMUSG00000050619.15	ENSMUST00000163766.8	3611	6	7245	0	6244	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCTTAAGCCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	120994361	120991176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120992031_120994227
ENSMUSG00000050619.15_120991177_121000583_1	chr2	-	1352	3	FSM	ENSMUSG00000050619.15	ENST00000568898.5	1378	3	22	4	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCTTAAGCCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	121000583	120991176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_120992031_120999679_120999885_121000290
ENSMUSG00000050619.15_120991177_121000583_2	chr2	-	1344	3	NNC	ENSMUSG00000050619.15	novel	3611	6	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCTTAAGCCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	121000583	120991176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_120992023_120999679_120999885_121000290
ENSMUSG00000050619.15_120991177_121000583_3	chr2	-	1345	3	NNC	ENSMUSG00000050619.15	novel	3611	6	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCTTAAGCCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	121000583	120991176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_120992031_120999679_120999878_121000290
ENSMUSG00000050619.15_120991588_120996624_1	chr2	-	999	3	ISM	ENSMUSG00000050619.15	ENSMUST00000110661.9	5072	5	4125	2834	3981	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTTTCCGTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	120996624	120991587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120992031_120994227_120994684_120996524
ENSMUSG00000050619.15_120991639_120996679_1	chr2	-	1003	3	ISM	ENSMUSG00000050619.15	ENSMUST00000110661.9	5072	5	4070	2885	3926	-462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACACCAAAGAATCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	120996679	120991638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120992031_120994227_120994684_120996524
ENSMUSG00000050619.15_120991691_120996756_1	chr2	-	1028	3	ISM	ENSMUSG00000050619.15	ENSMUST00000110661.9	5072	5	3993	2937	3849	-514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAAATGTGCTGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	120996756	120991690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120992031_120994227_120994684_120996524
ENSMUSG00000050619.15_120994307_120997155_1	chr2	-	1008	2	ISM	ENSMUSG00000050619.15	ENSMUST00000079024.12	2465	5	3594	3145	3450	1315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGATGATGAAGATGATAC	NA	NA	NA	NA	NA	NA	NA	NA	120997155	120994306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120994684_120996524
ENSMUSG00000050619.15_120994471_120999792_1	chr2	-	1001	3	ISM	ENSMUSG00000050619.15	ENSMUST00000079024.12	2465	5	957	3309	813	1151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTAGAAACCTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	120999792	120994470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120994684_120996524_120997200_120999679
ENSMUSG00000050619.15_120994510_120999868_1	chr2	-	1038	3	ISM	ENSMUSG00000050619.15	ENSMUST00000079024.12	2465	5	881	3348	737	1112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCCTACAAACCAGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	120999868	120994509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120994684_120996524_120997200_120999679
ENSMUSG00000050619.15_120996610_121000494_1	chr2	-	999	3	ISM	ENSMUSG00000050619.15	ENSMUST00000079024.12	2465	5	255	5448	111	-988	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGTCAGACAGTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	121000494	120996609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120997200_120999679_120999885_121000290
ENSMUSG00000050619.15_120996937_121001353_1	chr2	-	1037	4	ISM	ENSMUSG00000050619.15	ENST00000684362.1	3015	7	242	165687	242	-1315	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCGAAACTGTCACAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	121001353	120996936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120997200_120999679_120999885_121000290_121000748_121001241
ENSMUSG00000050619.15_120997038_121001422_1	chr2	-	1005	4	ISM	ENSMUSG00000050619.15	ENST00000684362.1	3015	7	173	165788	173	-1416	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGTATTTGATGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	121001422	120997037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120997200_120999679_120999885_121000290_121000748_121001241
ENSMUSG00000050619.15_120997097_121001472_1	chr2	-	996	4	ISM	ENSMUSG00000050619.15	ENST00000684362.1	3015	7	123	165847	123	-1475	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGGAACCAGTCTATTAC	NA	NA	NA	NA	NA	NA	NA	NA	121001472	120997096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_120997200_120999679_120999885_121000290_121000748_121001241
ENSMUSG00000050628.7_116325038_116328882_1	chr11	+	343	3	FSM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	118	1021	118	-1021	multi-exon	TRUE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCTTCGAACCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	116325037	116328882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_116325255_116325384_116325448_116328819
ENSMUSG00000050628.7_116325096_116328942_1	chr11	+	345	3	FSM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	176	961	176	-961	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTCCCCCCCTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	116325095	116328942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_116325255_116325384_116325448_116328819
ENSMUSG00000050640.17_100231483_100243552_1	chr5	-	479	6	NNC	ENSMUSG00000050640.17	novel	493	6	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCGAGAGTCATCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	100243552	100231482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_100231611_100233996_100234114_100240625_100240686_100240793_100240827_100240917_100240972_100243465
ENSMUSG00000050640.17_100231483_100243552_3	chr5	-	487	6	FSM	ENSMUSG00000050640.17	ENST00000508701.5	493	6	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCGAGAGTCATCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	100243552	100231482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_100231611_100233996_100234114_100240625_100240694_100240793_100240827_100240917_100240972_100243465
ENSMUSG00000050641.8_108322397_108323107_1	chr9	+	305	2	ISM	ENSMUSG00000050641.8	ENST00000432035.2	666	4	8693	174	8693	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCATCCCGGGGTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	108322396	108323107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108322456_108322861
ENSMUSG00000050668.11_79143018_79153817_1	chr17	+	2214	10	FSM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	0	1920	0	-1920	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTGACCAGGCGACATC	NA	NA	NA	NA	NA	NA	NA	NA	79143017	79153817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
ENSMUSG00000050668.11_79144232_79153918_1	chr17	+	2216	9	ISM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	1214	1819	1214	-1819	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGTGGCACTACACTATA	NA	NA	NA	NA	NA	NA	NA	NA	79144231	79153918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
ENSMUSG00000050668.11_79146486_79154153_1	chr17	+	2191	7	ISM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	3468	1584	3468	-1584	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCGTGGATCTTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	79146485	79154153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
ENSMUSG00000050668.11_79148389_79154405_1	chr17	+	2247	5	ISM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	5371	1332	5371	-1332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCTGATGCCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	79148388	79154405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
ENSMUSG00000050668.11_79149569_79154551_1	chr17	+	2151	3	ISM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	6551	1186	6551	-1186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAGCCCTAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	79149568	79154551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_79149659_79151247_79151330_79152572
ENSMUSG00000050675.8_70530699_70532104_1	chr11	+	1084	2	FSM	ENSMUSG00000050675.8	ENST00000611961.1	1883	2	463	336	463	-336	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTGCCTCTGTGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	70530698	70532104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70531583_70531904
ENSMUSG00000050675.8_70530885_70532285_1	chr11	+	1079	2	FSM	ENSMUSG00000050675.8	ENST00000611961.1	1883	2	649	155	649	-155	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTACTTTCCGGTCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	70530884	70532285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70531583_70531904
ENSMUSG00000050675.8_70531071_70532440_1	chr11	+	1048	2	FSM	ENSMUSG00000050675.8	ENST00000611961.1	1883	2	835	0	835	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAGTGGAGATCCTACG	NA	NA	NA	NA	NA	NA	NA	NA	70531070	70532440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70531583_70531904
ENSMUSG00000050697.10_5173223_5198195_1	chr15	+	673	4	ISM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	44	10220	44	-10220	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATGGTTGTGATGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	5173222	5198195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_5173478_5190083_5190226_5194192_5194322_5198048
ENSMUSG00000050697.10_5173343_5203735_1	chr15	+	686	6	ISM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	164	4680	0	-4680	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGCTTTGCTGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	5173342	5203735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_5173478_5190083_5190226_5194192_5194322_5198048_5198194_5199409_5199498_5203688
ENSMUSG00000050697.10_5173373_5203765_1	chr15	+	686	6	ISM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	194	4650	0	-4650	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGATGACCATGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	5173372	5203765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_5173478_5190083_5190226_5194192_5194322_5198048_5198194_5199409_5199498_5203688
ENSMUSG00000050697.10_5173373_5203809_1	chr15	+	730	6	ISM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	194	4606	0	-4606	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATCTTTTATACCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	5173372	5203809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_5173478_5190083_5190226_5194192_5194322_5198048_5198194_5199409_5199498_5203688
ENSMUSG00000050697.10_5190170_5206017_1	chr15	+	694	6	ISM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	16991	2398	16797	-2398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATCTTATAGTTCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	5190169	5206017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_5190226_5194192_5194322_5198048_5198194_5199409_5199498_5203688_5203914_5205966
ENSMUSG00000050697.10_5194214_5206124_1	chr15	+	724	5	ISM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	21035	2291	20841	-2291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGACCCACTAGCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	5194213	5206124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_5194322_5198048_5198194_5199409_5199498_5203688_5203914_5205966
ENSMUSG00000050697.10_5194249_5206191_1	chr15	+	756	5	ISM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	21070	2224	20876	-2224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTCTACCTAGCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	5194248	5206191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_5194322_5198048_5198194_5199409_5199498_5203688_5203914_5205966
ENSMUSG00000050697.10_5203753_5206593_1	chr15	+	682	3	ISM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	30574	1822	30380	-1822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATCCTGTGACAAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	5203752	5206593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_5203914_5205966_5206454_5206559
ENSMUSG00000050697.10_5203806_5206642_1	chr15	+	678	3	ISM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	30627	1773	30433	-1773	internal_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGATAGTAGGACTTACT	NA	NA	NA	NA	NA	NA	NA	NA	5203805	5206642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_5203914_5205966_5206454_5206559
ENSMUSG00000050697.10_5203862_5208213_1	chr15	+	711	4	ISM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	30683	202	30489	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGATCCATCAGCAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	5203861	5208213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_5203914_5205966_5206454_5206559_5206687_5208168
ENSMUSG00000050697.10_5205965_5208266_1	chr15	+	714	3	ISM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	32786	149	32592	-149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCAAGGAAAGCCCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	5205964	5208266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_5206454_5206559_5206687_5208168
ENSMUSG00000050697.10_5206153_5208415_1	chr15	+	675	3	ISM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	32974	0	32780	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAATTTTGCTTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	5206152	5208415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_5206454_5206559_5206687_5208168
ENSMUSG00000050705.16_36203569_36208204_1	chr17	-	1174	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148721.8	1293	6	119	0	119	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGTTTTCACGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	36208204	36203568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36208082
ENSMUSG00000050705.16_36203569_36208323_1	chr17	-	1287	6	NNC	ENSMUSG00000050705.16	novel	1293	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGTTTTCACGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	36208323	36203568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206959_36208082
ENSMUSG00000050708.17_45107368_45109308_1	chr7	-	962	4	NNC	ENSMUSG00000050708.17	novel	968	4	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	75640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	NA	NA	NA	NA	NA	NA	NA	45109308	45107367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_45107708_45107958_45108085_45108513_45108655_45108953
ENSMUSG00000050721.10_65463648_65471222_1	chr9	-	975	4	ISM	ENSMUSG00000050721.10	ENSMUST00000068944.9	3273	6	16100	1982	16100	-1982	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAAGCCCTCAGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	65471222	65463647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_65464362_65465900_65466000_65466701_65466807_65471165
ENSMUSG00000050730.18_8995888_8998220_1	chr9	-	1853	2	ISM	ENSMUSG00000050730.18	ENST00000298815.13	3280	24	240575	-1069	240575	1069	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCCATTCTTCACTACA	NA	NA	NA	NA	NA	NA	NA	NA	8998220	8995887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_8997687_8998166
ENSMUSG00000050730.18_9005782_9046579_1	chr9	-	1591	14	ISM	ENSMUSG00000050730.18	ENST00000298815.13	3280	24	192216	8825	192216	-8825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTAGACACTGCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	9046579	9005781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505
ENSMUSG00000050730.18_9009318_9238735_1	chr9	-	1621	18	ISM	ENSMUSG00000050730.18	ENST00000298815.13	3280	24	60	12361	60	-12361	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATAGTGGTGGAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	9238735	9009317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
ENSMUSG00000050732.10_72362544_72367494_1	chr6	-	290	3	FSM	ENSMUSG00000050732.10	ENSMUST00000059983.10	820	3	192	338	192	-333	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCGTCATCCTCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	72367494	72362543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_72362637_72365244_72365404_72367456
ENSMUSG00000050732.10_72365331_72367686_1	chr6	-	303	2	ISM	ENSMUSG00000050732.10	ENSMUST00000059983.10	820	3	0	3125	0	-3120	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGACCCAGAATGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	72367686	72365330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72365404_72367456
ENSMUSG00000050777.8_119995107_120001640_1	chr1	-	1147	2	FSM	ENSMUSG00000050777.8	ENSMUST00000056089.8	1311	2	164	0	164	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCCTATGACTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	120001640	119995106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_119996055_120001441
ENSMUSG00000050786.9_49296208_49317726_1	chr6	+	1561	3	FSM	ENSMUSG00000050786.9	ENSMUST00000055559.8	2351	3	0	790	0	-786	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAATCTCAGTGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	49296207	49317726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_49296415_49310844_49311232_49316759
ENSMUSG00000050786.9_49310842_49317910_1	chr6	+	1541	2	ISM	ENSMUSG00000050786.9	ENSMUST00000055559.8	2351	3	14634	606	14601	-602	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGACTTTAGCCAGATAGA	NA	NA	NA	NA	NA	NA	NA	NA	49310841	49317910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_49311232_49316759
ENSMUSG00000050786.9_49310891_49317962_1	chr6	+	1544	2	ISM	ENSMUSG00000050786.9	ENSMUST00000055559.8	2351	3	14683	554	14650	-550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCTTGGAAAATTAATG	NA	NA	NA	NA	NA	NA	NA	NA	49310890	49317962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_49311232_49316759
ENSMUSG00000050786.9_49310958_49318024_1	chr6	+	1539	2	ISM	ENSMUSG00000050786.9	ENSMUST00000055559.8	2351	3	14750	492	14717	-488	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAGAACATTAAAATATAA	NA	NA	NA	NA	NA	NA	NA	NA	49310957	49318024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_49311232_49316759
ENSMUSG00000050808.14_110562150_110567744_1	chr2	+	154	2	FSM	ENSMUSG00000050808.14	ENST00000527569.1	607	2	266	187	266	-185	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTACTACAACCCAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	110562149	110567744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_110562251_110567691
ENSMUSG00000050812.19_58799705_58801790_1	chr4	-	674	2	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	110959	794	110137	-785	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGCCCCTATCCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	58801790	58799704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58800321_58801732
ENSMUSG00000050812.19_58800010_58807854_1	chr4	-	682	5	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	104895	1099	104073	-1090	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTACTTGTCTTTAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	58807854	58800009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750
ENSMUSG00000050812.19_58800125_58809450_1	chr4	-	657	6	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	103299	1214	102477	-1205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATTTAAAAAAAAAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	58809450	58800124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395
ENSMUSG00000050812.19_58800179_58809534_1	chr4	-	687	6	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	103215	1268	102393	-1259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGGGAAGAAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	58809534	58800178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395
ENSMUSG00000050812.19_58807779_58811486_1	chr4	-	673	5	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	101263	8868	100441	-8859	internal_fragment	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGGCCCAGGAACCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	58811486	58807778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370
ENSMUSG00000050812.19_58809468_58811897_1	chr4	-	679	6	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	100852	10557	100030	-10548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTTTTGAAAGCCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	58811897	58809467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851
ENSMUSG00000050812.19_58810625_58815276_1	chr4	-	726	7	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	97473	11714	96651	-11705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGGAAAGGTAAAGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	58815276	58810624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258
ENSMUSG00000050812.19_58810807_58817474_1	chr4	-	667	8	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	95275	11896	94453	-11887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTACCTGCAGGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	58817474	58810806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399
ENSMUSG00000050812.19_58811431_58819208_1	chr4	-	731	8	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	93541	12520	92719	-12511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATCTGAAAAAGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	58819208	58811430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142
ENSMUSG00000050812.19_58811535_58819264_1	chr4	-	683	8	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	93485	12624	92663	-12615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTCATGCAATTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	58819264	58811534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142
ENSMUSG00000050812.19_58815296_58824278_1	chr4	-	649	7	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	88471	16385	87649	15258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAATCCTCTCCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	58824278	58815295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165
ENSMUSG00000050812.19_58817484_58824784_1	chr4	-	678	7	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	87965	18573	87143	13070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCAGCACTCTTAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	58824784	58817483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697
ENSMUSG00000050812.19_58819219_58827064_1	chr4	-	663	8	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	85685	20308	84863	11335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCATTGCTGTCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	58827064	58819218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036
ENSMUSG00000050812.19_58824242_58830438_1	chr4	-	700	7	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	82311	25331	81489	6312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTTGATCCCAACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	58830438	58824241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333
ENSMUSG00000050812.19_58824732_58832794_1	chr4	-	684	7	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	79955	25821	79133	5822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAATCATCATGCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	58832794	58824731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703
ENSMUSG00000050812.19_58827037_58834064_1	chr4	-	681	6	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	78685	28126	77863	3517	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGTGAATTTAACATTT	NA	NA	NA	NA	NA	NA	NA	NA	58834064	58827036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925
ENSMUSG00000050812.19_58828588_58836170_1	chr4	-	676	6	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	76579	29677	75757	1966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAACCCACATGTCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	58836170	58828587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121
ENSMUSG00000050812.19_58832706_58841427_1	chr4	-	708	6	ISM	ENSMUSG00000050812.19	ENSMUST00000107557.9	4946	24	70500	2152	70500	-2152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTACTTATATTTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	58841427	58832705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382
ENSMUSG00000050812.19_58833965_58841539_1	chr4	-	681	5	ISM	ENSMUSG00000050812.19	ENSMUST00000107557.9	4946	24	70388	3411	70388	-3411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTCAATAGAATTCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	58841539	58833964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382
ENSMUSG00000050812.19_58834595_58844144_1	chr4	-	662	6	ISM	ENSMUSG00000050812.19	ENSMUST00000107557.9	4946	24	67783	4041	67783	-4041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGAGTGAGGATGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	58844144	58834594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078
ENSMUSG00000050812.19_58840675_58849802_1	chr4	-	747	6	ISM	ENSMUSG00000050812.19	ENSMUST00000107557.9	4946	24	62125	10121	62125	-10121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCCTCATGATAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	58849802	58840674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679
ENSMUSG00000050812.19_58841534_58853165_1	chr4	-	671	8	ISM	ENSMUSG00000050812.19	ENSMUST00000107557.9	4946	24	58762	10980	58762	-10980	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAGATCATGCTCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	58853165	58841533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115
ENSMUSG00000050812.19_58842597_58853736_1	chr4	-	685	8	ISM	ENSMUSG00000050812.19	ENSMUST00000107557.9	4946	24	58191	12043	58191	-12043	internal_fragment	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCATTTAATCCAGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	58853736	58842596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650
ENSMUSG00000050812.19_58872711_58912479_1	chr4	-	681	6	ISM	ENSMUSG00000050812.19	ENST00000259335.8	7135	50	348	73791	270	-11915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTTCTTCTTCAAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	58912479	58872710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912365
ENSMUSG00000050821.15_20517700_20520998_1	chr16	+	1443	3	FSM	ENSMUSG00000050821.15	ENST00000310585.4	2281	3	40	798	40	-796	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCCCCCACGCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	20517699	20520998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_20518201_20518378_20518496_20520173
ENSMUSG00000050821.15_20517777_20521036_1	chr16	+	1404	3	FSM	ENSMUSG00000050821.15	ENST00000310585.4	2281	3	117	760	117	-758	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGAGTCCATGTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	20517776	20521036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_20518201_20518378_20518496_20520173
ENSMUSG00000050821.15_20517866_20521128_1	chr16	+	1407	3	FSM	ENSMUSG00000050821.15	ENST00000310585.4	2281	3	206	668	206	-666	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCCTTTGCCCAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	20517865	20521128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_20518201_20518378_20518496_20520173
ENSMUSG00000050821.15_20517872_20521128_1	chr16	+	1401	3	FSM	ENSMUSG00000050821.15	ENST00000310585.4	2281	3	212	668	212	-666	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCCTTTGCCCAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	20517871	20521128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_20518201_20518378_20518496_20520173
ENSMUSG00000050821.15_20517939_20521216_1	chr16	+	1422	3	FSM	ENSMUSG00000050821.15	ENST00000310585.4	2281	3	279	580	279	-578	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTTCTTTGAGCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	20517938	20521216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_20518201_20518378_20518496_20520173
ENSMUSG00000050821.15_20518377_20521442_1	chr16	+	1388	2	ISM	ENSMUSG00000050821.15	ENST00000310585.4	2281	3	717	354	717	-352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCCAGATTTGTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	20518376	20521442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20518496_20520173
ENSMUSG00000050821.15_20518426_20521497_1	chr16	+	1394	2	ISM	ENSMUSG00000050821.15	ENST00000310585.4	2281	3	766	299	766	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGGAAAGAGGGTAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	20518425	20521497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20518496_20520173
ENSMUSG00000050821.15_20518473_20521556_1	chr16	+	1406	2	ISM	ENSMUSG00000050821.15	ENST00000310585.4	2281	3	813	240	813	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCCTGTCCCAGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	20518472	20521556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20518496_20520173
ENSMUSG00000050846.10_75812801_75819966_1	chr15	+	1203	2	FSM	ENSMUSG00000050846.10	ENSMUST00000037260.8	2486	2	0	1283	0	-1283	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACACGGGAGAGCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	75812800	75819966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_75813009_75818971
ENSMUSG00000050854.10_118398732_118401242_1	chr4	-	1110	3	FSM	ENSMUSG00000050854.10	ENST00000439858.6	1109	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGCAGACATTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	118401242	118398731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_118399569_118399797_118399958_118401129
ENSMUSG00000050856.17_108581110_108582314_1	chr5	-	365	4	NNC	ENSMUSG00000050856.17	novel	371	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTCTCTTTACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	108582314	108581109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_108581198_108581596_108581696_108581891_108581947_108582191
ENSMUSG00000050860.7_95715326_95722966_1	chr11	+	2141	3	FSM	ENSMUSG00000050860.7	ENST00000413580.5	2107	3	-31	-3	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGGGACTTGTTCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	95715325	95722966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_95715649_95719491_95719602_95721258
ENSMUSG00000050891.11_58772866_58795817_1	chr15	-	707	9	ISM	ENSMUSG00000050891.11	ENSMUST00000228538.3	915	12	9759	43	4781	-42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACACGCTCTATAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	58795817	58772865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795753
ENSMUSG00000050891.11_58776577_58800598_1	chr15	-	650	7	NNC	ENSMUSG00000050891.11	novel	661	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGCGTGAGTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	58800598	58776576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_58776710_58777589_58777661_58781421_58781529_58788125_58788212_58792988_58793032_58793122_58793267_58800532
ENSMUSG00000050891.11_58776577_58800598_2	chr15	-	661	8	FSM	ENSMUSG00000050891.11	ENST00000517678.5	661	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGCGTGAGTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	58800598	58776576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58800532
ENSMUSG00000050891.11_58776693_58800598_1	chr15	-	659	10	ISM	ENSMUSG00000050891.11	ENSMUST00000228538.3	915	12	4978	3870	0	-116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAAGTACACATGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	58800598	58776692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795753_58795818_58798284_58798335_58800532
ENSMUSG00000050891.11_58777590_58805543_1	chr15	-	658	10	ISM	ENSMUSG00000050891.11	ENSMUST00000228538.3	915	12	33	4767	33	-1013	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTAGAAAATTCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	58805543	58777589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795753_58795818_58798284_58798335_58800532_58800599_58805527
ENSMUSG00000050910.6_115283596_115285700_1	chr11	+	1583	2	ISM	ENSMUSG00000050910.6	ENSMUST00000053288.6	3700	5	10854	1258	10854	-1258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGCCCTGGCAAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	115283595	115285700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115283650_115284171
ENSMUSG00000050912.16_7764042_7794334_1	chr9	+	2901	5	NNC	ENSMUSG00000050912.16	novel	2907	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTAGTGTTTTGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	7764041	7794334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_7764314_7768290_7768342_7790842_7791110_7791317_7791466_7792171
ENSMUSG00000050917.6_144415282_144417352_1	chr7	+	1238	3	FSM	ENSMUSG00000050917.6	ENST00000168712.3	2141	3	61	842	61	-842	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCGCTCGCCACAACTC	NA	NA	NA	NA	NA	NA	NA	NA	144415281	144417352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_144415570_144415968_144416068_144416501
ENSMUSG00000050917.6_144415379_144417426_1	chr7	+	1215	3	FSM	ENSMUSG00000050917.6	ENST00000168712.3	2141	3	158	768	158	-768	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATGTATTTTGCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	144415378	144417426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_144415570_144415968_144416068_144416501
ENSMUSG00000050917.6_144415508_144417570_1	chr7	+	1230	3	FSM	ENSMUSG00000050917.6	ENST00000168712.3	2141	3	287	624	287	-624	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCGGTGCTGCCCCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	144415507	144417570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_144415570_144415968_144416068_144416501
ENSMUSG00000050917.6_144415969_144417675_1	chr7	+	1273	2	ISM	ENSMUSG00000050917.6	ENST00000168712.3	2141	3	748	519	748	-519	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTCCACATGTAGTATC	NA	NA	NA	NA	NA	NA	NA	NA	144415968	144417675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_144416068_144416501
ENSMUSG00000050945.9_5210359_5214752_1	chr18	-	2474	2	ISM	ENSMUSG00000050945.9	ENST00000413025.5	2826	4	74161	-2	74161	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTATTCTCAATTGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	5214752	5210358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_5211199_5213118
ENSMUSG00000050945.9_5210493_5214921_1	chr18	-	2509	2	ISM	ENSMUSG00000050945.9	ENST00000413025.5	2826	4	73992	132	73992	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTGCCCTGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	5214921	5210492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_5211199_5213118
ENSMUSG00000050945.9_5210493_5245503_1	chr18	-	2625	3	ISM	ENSMUSG00000050945.9	ENST00000413025.5	2826	4	43410	132	43410	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTGCCCTGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	5245503	5210492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_5211199_5213118_5214920_5245385
ENSMUSG00000050945.9_5210672_5288897_1	chr18	-	2499	4	FSM	ENSMUSG00000050945.9	ENST00000413025.5	2826	4	16	311	16	28	multi-exon	FALSE	canonical	NA	NA	NA	NA	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGAGCTCCACAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	5288897	5210671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_5211199_5213118_5214920_5245385_5245504_5288844
ENSMUSG00000050945.9_5213365_5214809_1	chr18	-	700	2	ISM	ENSMUSG00000050945.9	ENST00000375311.1	1742	5	74104	2665	74104	-2665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCCCGGCAGCCTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	5214809	5213364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_5214028_5214772
ENSMUSG00000050945.9_5213500_5245400_1	chr18	-	690	3	ISM	ENSMUSG00000050945.9	ENST00000375311.1	1742	5	43513	2800	43513	-2800	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATTAAAAAGCCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	5245400	5213499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_5214028_5214772_5214920_5245385
ENSMUSG00000050945.9_5213640_5288896_1	chr18	-	705	4	ISM	ENSMUSG00000050945.9	ENST00000375311.1	1742	5	17	2940	17	-2940	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACGGCTGTGCTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	5288896	5213639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_5214028_5214772_5214920_5245385_5245504_5288844
ENSMUSG00000050953.11_56253545_56264210_1	chr10	+	651	2	FSM	ENSMUSG00000050953.11	ENSMUST00000068581.9	3071	2	119	2301	119	-2293	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGCCCCCACCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	56253544	56264210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_56253615_56263629
ENSMUSG00000050953.11_56255284_56265577_1	chr10	+	2148	2	FSM	ENSMUSG00000050953.11	ENSMUST00000220069.2	3182	2	100	934	100	-926	multi-exon	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAGGCAAGCCATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	56255283	56265577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_56255484_56263629
ENSMUSG00000050989.11_134266890_134279346_1	chr4	-	1552	12	NNC	ENSMUSG00000050989.11	novel	1605	12	NA	NA	84	37	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCCACGCGCCTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	134279346	134266889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_134267101_134267944_134268041_134268133_134268247_134269647_134269754_134270023_134270213_134270360_134270443_134271895_134272034_134272499_134272556_134272791_134273002_134275261_134275396_134278727_134278846_134279247
ENSMUSG00000050989.11_134266890_134279346_2	chr4	-	1558	12	FSM	ENSMUSG00000050989.11	ENST00000354177.9	1605	12	84	-37	84	37	multi-exon	FALSE	canonical	NA	NA	NA	NA	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCCACGCGCCTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	134279346	134266889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_134267101_134267944_134268047_134268133_134268247_134269647_134269754_134270023_134270213_134270360_134270443_134271895_134272034_134272499_134272556_134272791_134273002_134275261_134275396_134278727_134278846_134279247
ENSMUSG00000050989.11_134266890_134279346_3	chr4	-	1557	12	NNC	ENSMUSG00000050989.11	novel	1605	12	NA	NA	84	37	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCCACGCGCCTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	134279346	134266889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_134267101_134267944_134268047_134268133_134268247_134269647_134269754_134270023_134270213_134270360_134270443_134271895_134272034_134272499_134272556_134272791_134273002_134275261_134275396_134278727_134278846_134279248
ENSMUSG00000050989.11_134266890_134279346_4	chr4	-	1552	12	NNC	ENSMUSG00000050989.11	novel	1605	12	NA	NA	84	37	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCCACGCGCCTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	134279346	134266889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_134267101_134267944_134268047_134268133_134268247_134269647_134269754_134270023_134270213_134270360_134270443_134271895_134272034_134272505_134272556_134272791_134273002_134275261_134275396_134278727_134278846_134279247
ENSMUSG00000050989.11_134266890_134279346_5	chr4	-	1552	12	NNC	ENSMUSG00000050989.11	novel	1605	12	NA	NA	84	37	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCCACGCGCCTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	134279346	134266889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_134267101_134267944_134268047_134268133_134268247_134269647_134269754_134270023_134270207_134270360_134270443_134271895_134272034_134272499_134272556_134272791_134273002_134275261_134275396_134278727_134278846_134279247
ENSMUSG00000050989.11_134266890_134279477_1	chr4	-	1683	12	NNC	ENSMUSG00000050989.11	novel	3445	12	NA	NA	0	37	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCCACGCGCCTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	134279477	134266889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_134267101_134267944_134268047_134268133_134268247_134269647_134269754_134270023_134270213_134270360_134270443_134271895_134272034_134272499_134272556_134272791_134273002_134275261_134275390_134278727_134278846_134279247
ENSMUSG00000051007.16_140988112_140990710_1	chr7	-	1087	5	ISM	ENSMUSG00000051007.16	ENSMUST00000106008.3	1898	8	3339	405	3272	-405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTGAACTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	140990710	140988111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990690
ENSMUSG00000051007.16_140988356_140991727_1	chr7	-	1054	7	ISM	ENSMUSG00000051007.16	ENSMUST00000106008.3	1898	8	2322	649	2255	645	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGCTGCCGCTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	140991727	140988355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990690_140990799_140990898_140991005_140991710
ENSMUSG00000051007.16_140988505_140993978_1	chr7	-	1029	8	FSM	ENSMUSG00000051007.16	ENSMUST00000106008.3	1898	8	71	798	4	496	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTATGAACTTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	140993978	140988504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990690_140990799_140990898_140991005_140991710_140991788_140993914
ENSMUSG00000051007.16_140988559_140994003_1	chr7	-	1000	8	FSM	ENSMUSG00000051007.16	ENSMUST00000106008.3	1898	8	46	852	-21	442	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCCCTTCCACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	140994003	140988558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990690_140990799_140990898_140991005_140991710_140991788_140993914
ENSMUSG00000051007.16_140989001_140993981_1	chr7	-	550	6	NNC	ENSMUSG00000051007.16	novel	553	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTCCCGGGCAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	140993981	140989000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_140989114_140989243_140989338_140989758_140989854_140990898_140990999_140991706_140991788_140993914
ENSMUSG00000051007.16_140989001_140993981_2	chr7	-	552	6	FSM	ENSMUSG00000051007.16	ENST00000524550.5	553	6	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTCCCGGGCAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	140993981	140989000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_140989114_140989243_140989338_140989758_140989854_140990898_140991005_140991710_140991788_140993914
ENSMUSG00000051043.17_114742122_114759922_2	chr11	+	1122	4	NNC	ENSMUSG00000051043.17	novel	1257	4	NA	NA	123	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGCTTTGGGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	114742121	114759922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_114742404_114755228_114755373_114757450_114757546_114759321
ENSMUSG00000051043.17_114742122_114759922_3	chr11	+	1123	4	FSM	ENSMUSG00000051043.17	ENST00000342648.9	1257	4	134	0	123	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGCTTTGGGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	114742121	114759922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_114742404_114755227_114755373_114757450_114757546_114759321
ENSMUSG00000051048.18_99934749_99968628_1	chr7	+	2061	13	FSM	ENSMUSG00000051048.18	ENSMUST00000057023.12	2361	13	22	278	22	-278	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACCCATACACACAGACA	NA	NA	NA	NA	NA	NA	NA	NA	99934748	99968628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_99934934_99941782_99941926_99942953_99943178_99947104_99947255_99949843_99949896_99954706_99954871_99955073_99955251_99959993_99960059_99962412_99962573_99963814_99963878_99966248_99966318_99967188_99967286_99968116
ENSMUSG00000051048.18_99941783_99968906_1	chr7	+	2154	12	ISM	ENSMUSG00000051048.18	ENSMUST00000057023.12	2361	13	7056	0	7056	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTCTAACAGCGACTAT	NA	NA	NA	NA	NA	NA	NA	NA	99941782	99968906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_99941926_99942953_99943178_99947104_99947255_99949843_99949896_99954706_99954871_99955073_99955251_99959993_99960059_99962412_99962573_99963814_99963878_99966248_99966318_99967188_99967286_99968116
ENSMUSG00000051113.10_44146357_44146991_1	chr7	+	166	2	ISM	ENSMUSG00000051113.10	ENST00000595790.5	473	4	686	2787	275	419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGCCAGACCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	44146356	44146991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44146458_44146926
ENSMUSG00000051113.10_44146924_44149652_1	chr7	+	213	2	ISM	ENSMUSG00000051113.10	ENST00000595790.5	473	4	1253	126	842	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGCCTTCTACTTGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	44146923	44149652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_44147058_44149573
ENSMUSG00000051116.7_57765911_57766409_3	chr5	+	283	2	Genic_Genomic	ENSMUSG00000051116.7	novel	499	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATTTATTGATTACTG	NA	NA	NA	NA	NA	NA	NA	NA	57765910	57766409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	Genic_Genomic_chr5_+_57766013_57766228
ENSMUSG00000051116.7_57765911_57766409_4	chr5	+	281	2	Genic_Genomic	ENSMUSG00000051116.7	novel	499	1	NA	NA	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATTTATTGATTACTG	NA	NA	NA	NA	NA	NA	NA	NA	57765910	57766409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	Genic_Genomic_chr5_+_57766008_57766225
ENSMUSG00000051154.12_18677195_18681042_1	chr2	+	934	9	NNC	ENSMUSG00000051154.12	novel	938	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTTGGAGTTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	18677194	18681042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_18677219_18677253_18677415_18678705_18678818_18678935_18679000_18679091_18679127_18679471_18679528_18679619_18679677_18679760_18679821_18680677
ENSMUSG00000051154.12_18677195_18681042_2	chr2	+	932	8	NNC	ENSMUSG00000051154.12	novel	938	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTTGGAGTTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	18677194	18681042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_18677219_18677253_18677415_18678705_18678818_18678935_18679000_18679438_18679528_18679619_18679677_18679760_18679821_18680677
ENSMUSG00000051159.17_101291427_101294146_1	chrX	-	333	3	FSM	ENSMUSG00000051159.17	ENST00000431381.5	852	3	80	439	80	-417	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTCAACCTGCATCCTA	NA	NA	NA	NA	NA	NA	NA	NA	101294146	101291426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_101291615_101292168_101292294_101294126
ENSMUSG00000051159.17_101291492_101294187_1	chrX	-	309	3	FSM	ENSMUSG00000051159.17	ENST00000431381.5	852	3	39	504	39	-482	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCTCCTCTGGATCGAC	NA	NA	NA	NA	NA	NA	NA	NA	101294187	101291491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_101291615_101292168_101292294_101294126
ENSMUSG00000051169.15_113392290_113394907_1	chr6	-	951	6	ISM	ENSMUSG00000051169.15	ENSMUST00000113092.9	1269	9	1394	10	-4	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAGCAGATGTTTACC	NA	NA	NA	NA	NA	NA	NA	NA	113394907	113392289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394187_113394264_113394373_113394807
ENSMUSG00000051169.15_113392290_113395036_1	chr6	-	996	7	ISM	ENSMUSG00000051169.15	ENSMUST00000113092.9	1269	9	1265	10	2	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAGCAGATGTTTACC	NA	NA	NA	NA	NA	NA	NA	NA	113395036	113392289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991
ENSMUSG00000051169.15_113392509_113394910_2	chr6	-	594	5	NNC	ENSMUSG00000051169.15	novel	644	6	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCTCTCAACAGTAGACT	NA	NA	NA	NA	NA	NA	NA	NA	113394910	113392508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_113392684_113393750_113393874_113394101_113394187_113394264_113394369_113394803
ENSMUSG00000051169.15_113392509_113395037_1	chr6	-	638	6	FSM	ENSMUSG00000051169.15	ENST00000424438.5	644	6	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCTCTCAACAGTAGACT	NA	NA	NA	NA	NA	NA	NA	NA	113395037	113392508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_113392684_113393749_113393874_113394101_113394187_113394264_113394369_113394803_113394908_113394991
ENSMUSG00000051169.15_113394157_113396271_1	chr6	-	516	6	ISM	ENSMUSG00000051169.15	ENSMUST00000129047.8	1045	8	9	1090	9	-1090	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGGACAGTCTGCATGC	NA	NA	NA	NA	NA	NA	NA	NA	113396271	113394156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
ENSMUSG00000051177.17_135091918_135188268_1	chr2	+	1949	18	ISM	ENSMUSG00000051177.17	ENSMUST00000070724.12	3853	32	463468	53327	29	-53130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTCTTTGTCTACATAG	NA	NA	NA	NA	NA	NA	NA	NA	135091917	135188268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135091971_135093652_135093707_135094694_135094771_135102418_135102520_135104027_135104195_135136768_135136916_135152840_135152999_135159705_135159789_135164529_135164615_135167542_135167721_135172219_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216
ENSMUSG00000051177.17_135094695_135189396_1	chr2	+	2005	17	ISM	ENSMUSG00000051177.17	ENSMUST00000070724.12	3853	32	466245	52199	2806	-52002	internal_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGATGGGATCCAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	135094694	135189396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135094771_135102418_135102520_135104027_135104195_135136768_135136916_135152840_135152999_135159705_135159789_135164529_135164615_135167542_135167721_135172219_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216_135188322_135189286
ENSMUSG00000051177.17_135102448_135201636_1	chr2	+	1963	17	ISM	ENSMUSG00000051177.17	ENSMUST00000070724.12	3853	32	473998	39959	10559	-39762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTGAATCACACCGCATC	NA	NA	NA	NA	NA	NA	NA	NA	135102447	135201636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135102520_135104027_135104195_135136768_135136916_135152840_135152999_135159705_135159789_135164529_135164615_135167542_135167721_135172219_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216_135188322_135189286_135189397_135201573
ENSMUSG00000051177.17_135104028_135204357_1	chr2	+	2015	17	ISM	ENSMUSG00000051177.17	ENSMUST00000070724.12	3853	32	475578	37238	12139	-37041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCATAAACCATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	135104027	135204357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135104195_135136768_135136916_135152840_135152999_135159705_135159789_135164529_135164615_135167542_135167721_135172219_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216_135188322_135189286_135189397_135201573_135201707_135204303
ENSMUSG00000051177.17_135104145_135206720_1	chr2	+	1931	18	ISM	ENSMUSG00000051177.17	ENSMUST00000070724.12	3853	32	475695	34875	12256	-34678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAAATCGTTCGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	135104144	135206720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135104195_135136768_135136916_135152840_135152999_135159705_135159789_135164529_135164615_135167542_135167721_135172219_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216_135188322_135189286_135189397_135201573_135201707_135204303_135204358_135206687
ENSMUSG00000051177.17_135136848_135206868_1	chr2	+	1950	17	ISM	ENSMUSG00000051177.17	ENSMUST00000070724.12	3853	32	508398	34727	44959	-34530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTGGAGAAGTCCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	135136847	135206868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135136916_135152840_135152999_135159705_135159789_135164529_135164615_135167542_135167721_135172219_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216_135188322_135189286_135189397_135201573_135201707_135204303_135204358_135206687
ENSMUSG00000051177.17_135152852_135212377_1	chr2	+	1947	17	ISM	ENSMUSG00000051177.17	ENSMUST00000070724.12	3853	32	524402	29218	60963	-29021	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGCAAGACCTCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	135152851	135212377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135152999_135159705_135159789_135164529_135164615_135167542_135167721_135172219_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216_135188322_135189286_135189397_135201573_135201707_135204303_135204358_135206687_135206908_135212340
ENSMUSG00000051177.17_135152908_135212432_1	chr2	+	1946	17	ISM	ENSMUSG00000051177.17	ENSMUST00000070724.12	3853	32	524458	29163	61019	-28966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGACAAGCAACAACAG	NA	NA	NA	NA	NA	NA	NA	NA	135152907	135212432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135152999_135159705_135159789_135164529_135164615_135167542_135167721_135172219_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216_135188322_135189286_135189397_135201573_135201707_135204303_135204358_135206687_135206908_135212340
ENSMUSG00000051177.17_135152957_135212493_1	chr2	+	1958	17	ISM	ENSMUSG00000051177.17	ENSMUST00000070724.12	3853	32	524507	29102	61068	-28905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACCAAAAGCGAGAACACA	NA	NA	NA	NA	NA	NA	NA	NA	135152956	135212493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135152999_135159705_135159789_135164529_135164615_135167542_135167721_135172219_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216_135188322_135189286_135189397_135201573_135201707_135204303_135204358_135206687_135206908_135212340
ENSMUSG00000051177.17_135159704_135228090_1	chr2	+	2023	17	ISM	ENSMUSG00000051177.17	ENSMUST00000070724.12	3853	32	531254	13505	67815	-13308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCTCCATCCCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	135159703	135228090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135159789_135164529_135164615_135167542_135167721_135172219_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216_135188322_135189286_135189397_135201573_135201707_135204303_135204358_135206687_135206908_135212340_135212522_135228013
ENSMUSG00000051177.17_135164530_135228282_1	chr2	+	2028	17	ISM	ENSMUSG00000051177.17	ENSMUST00000070724.12	3853	32	536080	13313	72641	-13116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGAAAGTAGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	135164529	135228282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135164615_135167542_135167721_135172219_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216_135188322_135189286_135189397_135201573_135201707_135204303_135204358_135206687_135206908_135212340_135212522_135228013_135228091_135228192
ENSMUSG00000051177.17_135167653_135229757_1	chr2	+	1931	18	ISM	ENSMUSG00000051177.17	ENSMUST00000070724.12	3853	32	539203	11838	75764	-11641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACACAATGAGATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	135167652	135229757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135167721_135172219_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216_135188322_135189286_135189397_135201573_135201707_135204303_135204358_135206687_135206908_135212340_135212522_135228013_135228091_135228192_135228283_135229055_135229114_135229717
ENSMUSG00000051177.17_135172229_135241201_1	chr2	+	1934	18	ISM	ENSMUSG00000051177.17	ENSMUST00000070724.12	3853	32	543779	394	80340	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGAGGATCCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	135172228	135241201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216_135188322_135189286_135189397_135201573_135201707_135204303_135204358_135206687_135206908_135212340_135212522_135228013_135228091_135228192_135228283_135229055_135229114_135229717_135229805_135241168
ENSMUSG00000051177.17_135201630_135314077_1	chr2	+	1067	10	ISM	ENSMUSG00000051177.17	ENST00000637919.1	4626	29	109741	1362	109741	-1362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATCACGGCTCTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	135201629	135314077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135201707_135204303_135204358_135206687_135206908_135212340_135212522_135228013_135228091_135228192_135228283_135229055_135229114_135229717_135229805_135241168_135241287_135313972
ENSMUSG00000051177.17_135206743_135314285_1	chr2	+	1089	8	ISM	ENSMUSG00000051177.17	ENST00000637919.1	4626	29	114854	1154	114854	-1154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAAATATCCCTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	135206742	135314285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135206908_135212340_135212522_135228013_135228091_135228192_135228283_135229055_135229114_135229717_135229805_135241168_135241287_135313972
ENSMUSG00000051177.17_135206818_135314344_1	chr2	+	1073	8	ISM	ENSMUSG00000051177.17	ENST00000637919.1	4626	29	114929	1095	114929	-1095	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGTCCCATACCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	135206817	135314344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135206908_135212340_135212522_135228013_135228091_135228192_135228283_135229055_135229114_135229717_135229805_135241168_135241287_135313972
ENSMUSG00000051177.17_135212430_135314514_1	chr2	+	1064	7	ISM	ENSMUSG00000051177.17	ENST00000637919.1	4626	29	120541	925	120541	-925	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGAGCTCCTGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	135212429	135314514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_135212522_135228013_135228091_135228192_135228283_135229055_135229114_135229717_135229805_135241168_135241287_135313972
ENSMUSG00000051185.10_95241353_95263013_1	chr1	+	2106	3	NNC	ENSMUSG00000051185.10	novel	2112	3	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTTCTAGTTGCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	95241352	95263013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_95241976_95252833_95252969_95261665
ENSMUSG00000051220.3_101187931_101200594_1	chrX	-	2698	3	FSM	ENSMUSG00000051220.3	ENST00000373657.2	3962	3	61	1203	61	-1203	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACCTGGGAAGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	101200594	101187930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_101190440_101198626_101198735_101200513
ENSMUSG00000051220.3_101187989_101200697_1	chrX	-	2743	3	FSM	ENSMUSG00000051220.3	ENST00000373657.2	3962	3	-42	1261	0	-1261	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATGCTATGCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	101200697	101187988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_101190440_101198626_101198735_101200513
ENSMUSG00000051223.15_58432057_58445101_1	chr1	+	2465	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	0	1411	0	811	multi-exon	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAGGTGAAGGACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	58432056	58445101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUSG00000051223.15_58432057_58445110_1	chr1	+	2474	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	0	1402	0	820	multi-exon	FALSE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGACAGTCATTCGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	58432056	58445110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUSG00000051223.15_58432283_58445176_1	chr1	+	2314	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	226	1336	226	886	multi-exon	FALSE	canonical	NA	NA	NA	NA	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTAGTAACTCACCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	58432282	58445176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUSG00000051223.15_58433383_58445331_1	chr1	+	2354	11	ISM	ENSMUSG00000051223.15	ENSMUST00000186949.2	1492	12	754	-1041	754	1041	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGCTAAAAGTGAACATT	NA	NA	NA	NA	NA	NA	NA	NA	58433382	58445331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUSG00000051223.15_58438184_58445605_1	chr1	+	2378	9	ISM	ENSMUSG00000051223.15	ENSMUST00000186949.2	1492	12	5555	-1315	5555	-907	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCAAATGTATTCATTAG	NA	NA	NA	NA	NA	NA	NA	NA	58438183	58445605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUSG00000051223.15_58439236_58445714_1	chr1	+	2415	8	ISM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	7179	798	6607	-798	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATAGATCAGTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	58439235	58445714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUSG00000051223.15_58440305_58445898_1	chr1	+	2363	6	ISM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	8248	614	7676	-614	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGATCCTTGCATGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	58440304	58445898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUSG00000051223.15_58440520_58446002_1	chr1	+	2369	5	ISM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	8463	510	7891	-510	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGATCTTTCCCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	58440519	58446002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUSG00000051223.15_58440556_58446067_1	chr1	+	2398	5	ISM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	8499	445	7927	-445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACCTGTGAGTACAATGT	NA	NA	NA	NA	NA	NA	NA	NA	58440555	58446067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUSG00000051223.15_58440626_58446098_1	chr1	+	2359	5	ISM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	8569	414	7997	-414	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAAATTATTCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	58440625	58446098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUSG00000051223.15_58442140_58446220_1	chr1	+	2342	4	ISM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	10083	292	9511	-292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGTGTCAGTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	58442139	58446220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUSG00000051223.15_58442861_58446380_1	chr1	+	2362	3	ISM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	10804	132	10232	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGATGGTGAGGGGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	58442860	58446380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58442913_58443390_58443514_58444193
ENSMUSG00000051223.15_58443389_58446513_1	chr1	+	2445	2	ISM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	11332	-1	10760	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGTGTCTGTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	58443388	58446513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_58443514_58444193
ENSMUSG00000051225.10_57849584_57873206_1	chr15	+	740	3	FSM	ENSMUSG00000051225.10	ENST00000522648.5	960	3	222	-2	222	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCACAACCAGAGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	57849583	57873206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_57849938_57858609_57858735_57872945
ENSMUSG00000051232.14_78398423_78399178_1	chr11	-	243	2	ISM	ENSMUSG00000051232.14	ENSMUST00000052566.8	1347	6	3820	542	3820	-542	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCAGGTCAGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	78399178	78398422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78398632_78399144
ENSMUSG00000051232.14_78398480_78399225_1	chr11	-	233	2	ISM	ENSMUSG00000051232.14	ENSMUST00000052566.8	1347	6	3773	599	3773	-599	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCACAGACTCTCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	78399225	78398479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78398632_78399144
ENSMUSG00000051232.14_78398583_78400564_1	chr11	-	219	4	ISM	ENSMUSG00000051232.14	ENSMUST00000052566.8	1347	6	2434	702	2434	-702	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACGTCATGGTAAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	78400564	78398582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78398632_78399144_78399258_78399478_78399522_78400550
ENSMUSG00000051234.7_96353324_96360523_1	chr9	-	693	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	205	334	140	-334	multi-exon	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGCACTCAGTGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	96360523	96353323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_96353906_96356010_96356059_96360460
ENSMUSG00000051234.7_96353324_96360641_1	chr9	-	811	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	87	334	22	-334	multi-exon	FALSE	canonical	NA	NA	NA	NA	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGCACTCAGTGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	96360641	96353323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_96353906_96356010_96356059_96360460
ENSMUSG00000051256.11_113419571_113425190_1	chr6	+	1269	2	FSM	ENSMUSG00000051256.11	ENST00000489724.2	1152	2	-96	-21	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTGTTGGAGATTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	113419570	113425190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_113419759_113424109
ENSMUSG00000051285.18_7159328_7242558_1	chr1	+	3754	6	FSM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	184	1294	184	-1294	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGATAATTATGGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	7159327	7242558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_7159441_7190417_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
ENSMUSG00000051285.18_7190628_7242899_1	chr1	+	3772	5	ISM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	31484	953	31484	-953	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAAATCATTGGGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	7190627	7242899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
ENSMUSG00000051285.18_7190718_7242975_1	chr1	+	3758	5	ISM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	31574	877	31574	-877	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCCTCTTTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	7190717	7242975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
ENSMUSG00000051285.18_7233524_7243371_1	chr1	+	3705	2	ISM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	74380	481	74380	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGATGTCTCTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	7233523	7243371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_7233596_7239738
ENSMUSG00000051343.12_85312690_85324909_1	chr6	-	1857	3	ISM	ENSMUSG00000051343.12	ENSMUST00000060837.10	4035	5	26637	746	26637	-741	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTTGGCTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	85324909	85312689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_85314209_85314462_85314653_85324761
ENSMUSG00000051343.12_85312820_85325065_1	chr6	-	1883	3	ISM	ENSMUSG00000051343.12	ENSMUST00000060837.10	4035	5	26481	876	26481	-871	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTTTGTCTGGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	85325065	85312819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_85314209_85314462_85314653_85324761
ENSMUSG00000051343.12_85313274_85325662_1	chr6	-	1927	4	ISM	ENSMUSG00000051343.12	ENSMUST00000060837.10	4035	5	25884	1330	25884	-1325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCCTCCAGGTTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	85325662	85313273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_85314209_85314462_85314653_85324761_85325438_85325536
ENSMUSG00000051343.12_85313448_85325765_1	chr6	-	1856	4	ISM	ENSMUSG00000051343.12	ENSMUST00000060837.10	4035	5	25781	1504	25781	-1499	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGGTGGTGGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	85325765	85313447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_85314209_85314462_85314653_85324761_85325438_85325536
ENSMUSG00000051343.12_85313588_85325909_1	chr6	-	1860	4	ISM	ENSMUSG00000051343.12	ENSMUST00000060837.10	4035	5	25637	1644	25637	-1639	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATGGGAACTAAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	85325909	85313587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_85314209_85314462_85314653_85324761_85325438_85325536
ENSMUSG00000051343.12_85314031_85351546_1	chr6	-	1948	5	FSM	ENSMUSG00000051343.12	ENSMUST00000060837.10	4035	5	0	2087	0	-2082	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTCCCCTGGCCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	85351546	85314030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_85314209_85314462_85314653_85324761_85325438_85325536_85325974_85351079
ENSMUSG00000051344.14_64900346_64977427_1	chr1	-	1953	6	FSM	ENSMUSG00000051344.14	ENST00000457206.1	2127	6	174	0	174	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGCTCAGAGAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	64977427	64900345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_64900410_64921531_64921576_64922287_64922482_64931910_64932057_64960708_64961642_64976855
ENSMUSG00000051344.14_64900346_64977486_2	chr1	-	2011	6	NNC	ENSMUSG00000051344.14	novel	2127	6	NA	NA	115	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGCTCAGAGAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	64977486	64900345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_64900410_64921532_64921576_64922287_64922482_64931910_64932057_64960708_64961642_64976855
ENSMUSG00000051344.14_64900346_64977486_3	chr1	-	2007	6	NNC	ENSMUSG00000051344.14	novel	2127	6	NA	NA	115	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGCTCAGAGAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	64977486	64900345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_64900410_64921531_64921576_64922287_64922473_64931906_64932057_64960708_64961642_64976855
ENSMUSG00000051351.15_136013378_136017395_1	chr4	+	664	3	FSM	ENSMUSG00000051351.15	ENST00000374608.3	2924	3	-3	2263	0	-2263	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTCGAAAGTGGGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	136013377	136017395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_136013793_136014499_136014627_136017273
ENSMUSG00000051351.15_136014496_136017676_1	chr4	+	534	2	ISM	ENSMUSG00000051351.15	ENST00000374608.3	2924	3	1115	1982	1115	-1982	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGGCGAGCGGCCCTACG	NA	NA	NA	NA	NA	NA	NA	NA	136014495	136017676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_136014627_136017273
ENSMUSG00000051351.15_136014519_136017764_1	chr4	+	599	2	ISM	ENSMUSG00000051351.15	ENST00000374608.3	2924	3	1138	1894	1138	-1894	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGAGAAGCCTCACAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	136014518	136017764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_136014627_136017273
ENSMUSG00000051351.15_136014560_136017833_1	chr4	+	627	2	ISM	ENSMUSG00000051351.15	ENST00000374608.3	2924	3	1179	1825	1179	-1825	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGGACCCACAGCGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	136014559	136017833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_136014627_136017273
ENSMUSG00000051355.19_22847977_22906569_1	chr11	-	2240	2	ISM	ENSMUSG00000051355.19	ENSMUST00000057843.12	1459	4	22427	-1787	22427	1787	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGTGAAATGGAGGATAA	NA	NA	NA	NA	NA	NA	NA	NA	22906569	22847976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_22850058_22906410
ENSMUSG00000051355.19_22848167_22932207_1	chr11	-	2302	3	FSM	ENSMUSG00000051355.19	ENSMUST00000159081.8	4508	3	175	2031	175	1597	multi-exon	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCCTTCCCTTAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	22932207	22848166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_22850058_22906410_22906693_22932078
ENSMUSG00000051359.16_37368739_37372467_1	chr15	-	539	2	ISM	ENSMUSG00000051359.16	ENST00000395923.5	1618	4	25229	2221	25229	129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTTCTGCAAGCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	37372467	37368738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_37369170_37372359
ENSMUSG00000051359.16_37368868_37397392_2	chr15	-	500	3	ISM	ENSMUSG00000051359.16	ENST00000395923.5	1618	4	304	2350	304	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGACTTCGTGGTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	37397392	37368867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_37369170_37372359_37372466_37397300
ENSMUSG00000051359.16_37372360_37397673_1	chr15	-	479	2	ISM	ENSMUSG00000051359.16	ENST00000395923.5	1618	4	23	5842	23	-3492	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGGCTGAGGGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	37397673	37372359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_37372466_37397300
ENSMUSG00000051367.9_73090305_73093059_1	chr12	-	718	2	FSM	ENSMUSG00000051367.9	ENSMUST00000050029.8	3316	2	894	1704	894	-1704	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATATTGGGGCCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	73093059	73090304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_73090604_73092640
ENSMUSG00000051378.11_102799160_102803826_1	chr11	-	708	4	ISM	ENSMUSG00000051378.11	ENSMUST00000021311.10	3326	16	12124	2805	12124	-2805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCCGAGTCTGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	102803826	102799159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_102799465_102799712_102799919_102803179_102803296_102803745
ENSMUSG00000051391.10_135939741_135963404_1	chr5	-	993	2	FSM	ENSMUSG00000051391.10	ENSMUST00000055808.6	3520	2	49	2478	4	-2478	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAGAAACCCACGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	135963404	135939740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_135940506_135963176
ENSMUSG00000051444.10_37373197_37375657_1	chr3	+	2311	2	FSM	ENSMUSG00000051444.10	ENST00000542236.5	2311	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATACTATAGGATATACA	NA	NA	NA	NA	NA	NA	NA	NA	37373196	37375657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_37375339_37375488
ENSMUSG00000051444.10_37373197_37375657_2	chr3	+	2306	2	NNC	ENSMUSG00000051444.10	novel	2311	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATACTATAGGATATACA	NA	NA	NA	NA	NA	NA	NA	NA	37373196	37375657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_37375339_37375493
ENSMUSG00000051469.15_24146808_24150798_1	chr18	-	1157	3	ISM	ENSMUSG00000051469.15	ENSMUST00000153337.2	1513	4	2579	-174	2579	174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCCATCCTCAAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	24150798	24146807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_24147743_24150340_24150489_24150724
ENSMUSG00000051469.15_24146982_24150994_1	chr18	-	1179	3	ISM	ENSMUSG00000051469.15	ENSMUST00000153337.2	1513	4	2383	0	2383	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTGTGAAGTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	24150994	24146981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_24147743_24150340_24150489_24150724
ENSMUSG00000051469.15_24147084_24151059_1	chr18	-	1142	3	ISM	ENSMUSG00000051469.15	ENSMUST00000153337.2	1513	4	2318	102	2318	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAGAAAAAAAAAACTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	24151059	24147083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_24147743_24150340_24150489_24150724
ENSMUSG00000051483.10_93405715_93407107_1	chr16	+	495	2	ISM	ENSMUSG00000051483.10	ENSMUST00000039659.9	1237	3	990	286	938	-286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCATGGTGAACCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	93405714	93407107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_93405785_93406682
ENSMUSG00000051495.9_127316481_127319851_1	chr8	-	2760	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	874	1446	874	-1446	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTTTTTTTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	127319851	127316480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_127318568_127319178
ENSMUSG00000051495.9_127316737_127320120_1	chr8	-	2773	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	605	1702	605	-1702	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTTTTCCTTAGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	127320120	127316736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_127318568_127319178
ENSMUSG00000051495.9_127317201_127320569_1	chr8	-	2758	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	156	2166	156	-2166	multi-exon	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCGTCAGAGGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	127320569	127317200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_127318568_127319178
ENSMUSG00000051504.19_55418373_55418913_2	chr7	+	341	2	FSM	ENSMUSG00000051504.19	ENST00000391797.3	559	2	218	0	218	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTCAGCCCAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	55418372	55418913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_55418470_55418669
ENSMUSG00000051517.15_43496415_43497285_1	chr4	-	594	3	ISM	ENSMUSG00000051517.15	ENSMUST00000054538.13	1659	9	2410	273	2410	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTATTGCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	43497285	43496414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43496721_43496820_43496910_43497086
ENSMUSG00000051518.9_80145267_80145597_1	chr15	-	165	2	ISM	ENSMUSG00000051518.9	ENSMUST00000052499.9	838	4	2919	451	2919	-451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAGAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	80145597	80145266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_80145332_80145497
ENSMUSG00000051518.9_80148178_80148447_1	chr15	-	161	2	ISM	ENSMUSG00000051518.9	ENSMUST00000052499.9	838	4	69	3362	69	-3362	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAAGACTGTGAGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	80148447	80148177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_80148319_80148427
ENSMUSG00000051579.11_135071192_135072965_1	chrX	-	762	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	126	362	35	-362	multi-exon	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAGACAGCAAATTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	135072965	135071191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_135071799_135072384_135072455_135072880
ENSMUSG00000051579.11_135071334_135073091_1	chrX	-	746	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	0	504	0	-504	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAATAATAATTACCTG	NA	NA	NA	NA	NA	NA	NA	NA	135073091	135071333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_135071799_135072384_135072455_135072880
ENSMUSG00000051586.18_120959536_121003967_1	chr6	-	1189	10	ISM	ENSMUSG00000051586.18	ENST00000414725.6	2891	20	15253	49	15253	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCGTCTTAGACAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	121003967	120959535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120996656_120996741_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926
ENSMUSG00000051586.18_120959601_121004018_1	chr6	-	1175	10	ISM	ENSMUSG00000051586.18	ENST00000414725.6	2891	20	15202	114	15202	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGAGGCAGGTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	121004018	120959600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120996656_120996741_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926
ENSMUSG00000051586.18_120978581_121006679_1	chr6	-	1203	10	ISM	ENSMUSG00000051586.18	ENST00000414725.6	2891	20	12541	19094	12541	5620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGTCCAGGTAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	121006679	120978580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120978657_120979747_120979837_120985955_120986143_120996656_120996741_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607
ENSMUSG00000051586.18_120979747_121008086_1	chr6	-	1282	10	ISM	ENSMUSG00000051586.18	ENST00000414725.6	2891	20	11134	20260	11134	4454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAGCTTCCTTCCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	121008086	120979746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120979837_120985955_120986143_120996656_120996741_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957
ENSMUSG00000051586.18_120984201_121019295_1	chr6	-	2693	17	ISM	ENSMUSG00000051586.18	ENSMUST00000077159.8	2875	18	39256	0	-75	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTATTTGTCCTTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	121019295	120984200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120984391_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956
ENSMUSG00000051586.18_120985995_121010688_1	chr6	-	1181	10	ISM	ENSMUSG00000051586.18	ENST00000414725.6	2891	20	8532	26508	8532	-1794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCGCCTATCAGCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	121010688	120985994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120986143_120996656_120996741_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658
ENSMUSG00000051586.18_120986062_121010744_1	chr6	-	1170	10	ISM	ENSMUSG00000051586.18	ENST00000414725.6	2891	20	8476	26575	8476	-1861	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGCTGAGCGCCGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	121010744	120986061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_120986143_120996656_120996741_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658
ENSMUSG00000051586.18_120996692_121011096_1	chr6	-	1187	10	NNC	ENSMUSG00000051586.18	novel	2891	20	NA	NA	8124	-12491	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTCGCCCTGCTCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	121011096	120996691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_120996741_120998143_120998315_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990
ENSMUSG00000051590.11_127742982_127748214_1	chr1	-	731	3	NNC	ENSMUSG00000051590.11	novel	786	3	NA	NA	60	12	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAACCATTGCTTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	127748214	127742981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_127743068_127744971_127745558_127748155
ENSMUSG00000051590.11_127742982_127748214_2	chr1	-	738	3	FSM	ENSMUSG00000051590.11	ENST00000392918.7	786	3	60	-12	60	12	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAACCATTGCTTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	127748214	127742981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_127743075_127744971_127745558_127748155
ENSMUSG00000051596.16_38435067_38457231_1	chr5	+	635	4	ISM	ENSMUSG00000051596.16	ENST00000612102.1	1598	5	153	3002	153	-3002	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATCCACATCGGGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	38435066	38457231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_38435169_38445240_38445378_38455200_38455332_38456966
ENSMUSG00000051596.16_38455234_38457470_1	chr5	+	602	2	ISM	ENSMUSG00000051596.16	ENST00000612102.1	1598	5	20320	2763	20320	-2763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCCTGTGCTGAGACTCGC	NA	NA	NA	NA	NA	NA	NA	NA	38455233	38457470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_38455332_38456966
ENSMUSG00000051596.16_38457332_38460173_1	chr5	+	650	2	ISM	ENSMUSG00000051596.16	ENST00000612102.1	1598	5	22418	60	22418	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCCATTTTCTACCGGA	NA	NA	NA	NA	NA	NA	NA	NA	38457331	38460173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_38457875_38460066
ENSMUSG00000051596.16_38457437_38460231_1	chr5	+	603	2	ISM	ENSMUSG00000051596.16	ENST00000612102.1	1598	5	22523	2	22523	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGCCTGAGTCCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	38457436	38460231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_38457875_38460066
ENSMUSG00000051596.16_38457532_38460237_1	chr5	+	514	2	ISM	ENSMUSG00000051596.16	ENST00000615738.1	1602	5	22618	0	22618	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGTCCTCATGAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	38457531	38460237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_38457875_38460066
ENSMUSG00000051650.12_22786984_22809554_1	chr11	-	273	2	FSM	ENSMUSG00000051650.12	ENSMUST00000062844.11	3057	2	547	2237	547	-2119	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTACAATCCCATCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	22809554	22786983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_22787196_22809493
ENSMUSG00000051730.16_69704228_69711228_1	chr2	-	253	3	ISM	ENSMUSG00000051730.16	ENST00000410097.5	670	7	4473	2610	4473	-2610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCTAAATCTCAACCCG	NA	NA	NA	NA	NA	NA	NA	NA	69711228	69704227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_69704280_69709445_69709529_69711110
ENSMUSG00000051730.16_69711110_69711701_1	chr2	-	244	2	ISM	ENSMUSG00000051730.16	ENST00000308099.7	499	5	4000	9492	4000	-9492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTAATAGAAGTACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	69711701	69711109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_69711293_69711640
ENSMUSG00000051730.16_69711215_69715662_1	chr2	-	263	3	ISM	ENSMUSG00000051730.16	ENST00000308099.7	499	5	39	9597	39	-9597	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGATATGATTCAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	69715662	69711214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_69711293_69711640_69711756_69715592
ENSMUSG00000051747.16_76747521_76757522_1	chr2	-	3436	3	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	55277	3233	53004	-3185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTTTGAGCTCGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	76757522	76747520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430
ENSMUSG00000051747.16_76747743_76762584_1	chr2	-	3420	4	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	50215	3455	47942	-3407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTTACAGCACCACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	76762584	76747742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475
ENSMUSG00000051747.16_76747889_76762878_1	chr2	-	3380	5	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	49921	3601	47648	-3553	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTCACCTGTCCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	76762878	76747888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789
ENSMUSG00000051747.16_76748135_76764547_1	chr2	-	3395	6	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	48252	3847	45979	-3799	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAGAATGGAGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	76764547	76748134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482
ENSMUSG00000051747.16_76748398_76766801_1	chr2	-	3375	7	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	45998	4110	43725	-4062	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGCAGAATTTATGCAC	NA	NA	NA	NA	NA	NA	NA	NA	76766801	76748397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725
ENSMUSG00000051747.16_76748457_76766855_1	chr2	-	3370	7	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	45944	4169	43671	-4121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTTTAGATTTAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	76766855	76748456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725
ENSMUSG00000051747.16_76748575_76767069_1	chr2	-	3379	8	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	45730	4287	43457	-4239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGGTTTGAGATGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	76767069	76748574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725_76766892_76766978
ENSMUSG00000051747.16_76748678_76767970_1	chr2	-	3381	9	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	44829	4390	42556	-4342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTGTAGGGAAGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	76767970	76748677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725_76766892_76766978_76767121_76767916
ENSMUSG00000051747.16_76748722_76768069_1	chr2	-	3436	9	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	44730	4434	42457	-4386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATGAGCCGCCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	76768069	76748721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725_76766892_76766978_76767121_76767916
ENSMUSG00000051747.16_76748960_76768746_1	chr2	-	3402	10	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	44053	4672	41780	-4624	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTTAGTCAAGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	76768746	76748959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725_76766892_76766978_76767121_76767916_76768178_76768650
ENSMUSG00000051747.16_76749025_76768868_1	chr2	-	3459	10	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	43931	4737	41658	-4689	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGACTACGCAGATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	76768868	76749024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725_76766892_76766978_76767121_76767916_76768178_76768650
ENSMUSG00000051747.16_76749111_76768868_1	chr2	-	3373	10	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	43931	4823	41658	-4775	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTATGGAACAGTTAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	76768868	76749110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725_76766892_76766978_76767121_76767916_76768178_76768650
ENSMUSG00000051747.16_76749229_76769145_1	chr2	-	3406	11	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	43654	4941	41381	-4893	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCCGTACCGCGTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	76769145	76749228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725_76766892_76766978_76767121_76767916_76768178_76768650_76768912_76769037
ENSMUSG00000051747.16_76749344_76769242_1	chr2	-	3388	11	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	43557	5056	41284	-5008	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTCATTTCTCCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	76769242	76749343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725_76766892_76766978_76767121_76767916_76768178_76768650_76768912_76769037
ENSMUSG00000051747.16_76749479_76769449_1	chr2	-	3371	12	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	43350	5191	41077	-5143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAGGAGGAACACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	76769449	76749478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725_76766892_76766978_76767121_76767916_76768178_76768650_76768912_76769037_76769299_76769387
ENSMUSG00000051747.16_76749565_76769550_1	chr2	-	3386	12	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	43249	5277	40976	-5229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAAGGTGTCTCAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	76769550	76749564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725_76766892_76766978_76767121_76767916_76768178_76768650_76768912_76769037_76769299_76769387
ENSMUSG00000051747.16_76749618_76769614_1	chr2	-	3397	12	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	43185	5330	40912	-5282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCTAATGAGGAAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	76769614	76749617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725_76766892_76766978_76767121_76767916_76768178_76768650_76768912_76769037_76769299_76769387
ENSMUSG00000051747.16_76749761_76770283_1	chr2	-	3381	13	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	42516	5473	40243	-5425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGGACCAAGAGACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	76770283	76749760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725_76766892_76766978_76767121_76767916_76768178_76768650_76768912_76769037_76769299_76769387_76769652_76770193
ENSMUSG00000051747.16_76749827_76770355_1	chr2	-	3387	13	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	42444	5539	40171	-5491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAACAGAGAACCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	76770355	76749826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725_76766892_76766978_76767121_76767916_76768178_76768650_76768912_76769037_76769299_76769387_76769652_76770193
ENSMUSG00000051747.16_76749885_76770411_1	chr2	-	3385	13	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	42388	5597	40115	-5549	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCGATAACTCAGCAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	76770411	76749884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725_76766892_76766978_76767121_76767916_76768178_76768650_76768912_76769037_76769299_76769387_76769652_76770193
ENSMUSG00000051747.16_76750554_76773287_1	chr2	-	3381	16	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	39512	6266	37239	-6218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACAGGCCGATCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	76773287	76750553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725_76766892_76766978_76767121_76767916_76768178_76768650_76768912_76769037_76769299_76769387_76769652_76770193_76770455_76772165_76772427_76772519_76772784_76773190
ENSMUSG00000051747.16_76757472_76773733_1	chr2	-	3394	15	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	39066	13184	36793	-13136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGCCAAGTGTCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	76773733	76757471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725_76766892_76766978_76767121_76767916_76768178_76768650_76768912_76769037_76769299_76769387_76769652_76770193_76770455_76772165_76772427_76772519_76772784_76773190_76773464_76773544
ENSMUSG00000051747.16_76762974_76774798_1	chr2	-	3442	15	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	38001	18686	35728	-18638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCCTGGTACAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	76774798	76762973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76763075_76764482_76764715_76766725_76766892_76766978_76767121_76767916_76768178_76768650_76768912_76769037_76769299_76769387_76769652_76770193_76770455_76772165_76772427_76772519_76772784_76773190_76773464_76773544_76773812_76774234_76774517_76774652
ENSMUSG00000051747.16_76768011_76775533_1	chr2	-	3442	11	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	37266	23723	34993	-23675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCTGAACATCAGGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	76775533	76768010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76768178_76768650_76768912_76769037_76769299_76769387_76769652_76770193_76770455_76772165_76772427_76772519_76772784_76773190_76773464_76773544_76773812_76774234_76774517_76774652
ENSMUSG00000051747.16_76773675_76779474_1	chr2	-	3403	9	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	33325	29387	31052	-29339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAATACTCAATTACATC	NA	NA	NA	NA	NA	NA	NA	NA	76779474	76773674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76773812_76774234_76774517_76774652_76776347_76776460_76776630_76776735_76776901_76777040_76777325_76778171_76778417_76778530_76778765_76779281
ENSMUSG00000051747.16_76776486_76798845_1	chr2	-	3380	19	ISM	ENSMUSG00000051747.16	ENST00000360870.10	17073	46	14046	32150	11681	-32150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTCATAAATACCCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	76798845	76776485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76776630_76776735_76776901_76777040_76777325_76778171_76778417_76778530_76778765_76779281_76779488_76780358_76780502_76781658_76781875_76781990_76782052_76782263_76782523_76783113_76783180_76783344_76783633_76784929_76785053_76785138_76785433_76794818_76794957_76795434_76795573_76796120_76796259_76797397_76797530_76798739
ENSMUSG00000051747.16_76777065_76800125_1	chr2	-	3393	19	ISM	ENSMUSG00000051747.16	ENST00000360870.10	17073	46	12766	32729	10401	-32729	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACATTCTGGTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	76800125	76777064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76777325_76778171_76778417_76778530_76778765_76779281_76779488_76780358_76780502_76781658_76781875_76781990_76782052_76782263_76782523_76783113_76783180_76783344_76783633_76784929_76785053_76785138_76785433_76794818_76794957_76795434_76795573_76796120_76796259_76797397_76797530_76798739_76798878_76799483_76799637_76799964
ENSMUSG00000051747.16_76778242_76804506_1	chr2	-	3380	19	ISM	ENSMUSG00000051747.16	ENST00000360870.10	17073	46	8385	33906	6020	-33906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGGAGCCTGCTGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	76804506	76778241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76778417_76778530_76778765_76779281_76779488_76780358_76780502_76781658_76781875_76781990_76782052_76782263_76782523_76783113_76783180_76783344_76783633_76784929_76785053_76785138_76785433_76794818_76794957_76795434_76795573_76796120_76796259_76797397_76797530_76798739_76798878_76799483_76799637_76799964_76800296_76804359
ENSMUSG00000051747.16_76778630_76805353_1	chr2	-	3386	20	ISM	ENSMUSG00000051747.16	ENST00000360870.10	17073	46	7538	34294	5173	-34294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGAGTCAGGATTTGATAT	NA	NA	NA	NA	NA	NA	NA	NA	76805353	76778629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76778765_76779281_76779488_76780358_76780502_76781658_76781875_76781990_76782052_76782263_76782523_76783113_76783180_76783344_76783633_76784929_76785053_76785138_76785433_76794818_76794957_76795434_76795573_76796120_76796259_76797397_76797530_76798739_76798878_76799483_76799637_76799964_76800296_76804359_76804602_76804694_76804781_76805254
ENSMUSG00000051747.16_76778701_76805416_1	chr2	-	3378	20	ISM	ENSMUSG00000051747.16	ENST00000360870.10	17073	46	7475	34365	5110	-34365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGCTGGAAGAACTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	76805416	76778700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_76778765_76779281_76779488_76780358_76780502_76781658_76781875_76781990_76782052_76782263_76782523_76783113_76783180_76783344_76783633_76784929_76785053_76785138_76785433_76794818_76794957_76795434_76795573_76796120_76796259_76797397_76797530_76798739_76798878_76799483_76799637_76799964_76800296_76804359_76804602_76804694_76804781_76805254
ENSMUSG00000051768.10_24246124_24266767_1	chr7	+	1305	10	ISM	ENSMUSG00000051768.10	ENSMUST00000205573.2	2528	19	410	6093	410	-5996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGCCTCTACCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	24246123	24266767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24246261_24246417_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738
ENSMUSG00000051768.10_24246167_24266828_1	chr7	+	1323	10	ISM	ENSMUSG00000051768.10	ENSMUST00000205573.2	2528	19	453	6032	-408	-5935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTAGGGGGGCTCGCACT	NA	NA	NA	NA	NA	NA	NA	NA	24246166	24266828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24246261_24246417_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738
ENSMUSG00000051768.10_24246217_24266965_1	chr7	+	1410	10	ISM	ENSMUSG00000051768.10	ENSMUST00000205573.2	2528	19	503	5895	-358	-5798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACTGGACCCCAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	24246216	24266965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24246261_24246417_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738
ENSMUSG00000051768.10_24246575_24267351_1	chr7	+	1358	10	ISM	ENSMUSG00000051768.10	ENSMUST00000063249.9	2155	17	0	5512	0	-5412	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCCCCACGACCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	24246574	24267351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234
ENSMUSG00000051768.10_24246710_24266997_1	chr7	+	1013	8	ISM	ENSMUSG00000051768.10	ENST00000543982.5	1810	16	-17	5766	-17	-5766	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCCTCTGACCTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	24246709	24266997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24246785_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738
ENSMUSG00000051768.10_24246758_24269910_1	chr7	+	1306	12	ISM	ENSMUSG00000051768.10	ENSMUST00000063249.9	2155	17	183	2953	31	-2853	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1021	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTCACCCCCGAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	24246757	24269910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873
ENSMUSG00000051768.10_24264994_24269913_1	chr7	+	1039	9	ISM	ENSMUSG00000051768.10	ENST00000543982.5	1810	16	18267	2850	18267	-2850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACCCCCGAGGCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	24264993	24269913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873
ENSMUSG00000051768.10_24264994_24271684_1	chr7	+	1372	12	ISM	ENSMUSG00000051768.10	ENST00000543982.5	1810	16	18267	1079	18267	-1079	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1387	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAGGAGGCTCATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	24264993	24271684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633
ENSMUSG00000051768.10_24265642_24272554_1	chr7	+	1364	12	ISM	ENSMUSG00000051768.10	ENST00000543982.5	1810	16	18915	209	18915	-209	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCCTGGAGGGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	24265641	24272554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478
ENSMUSG00000051768.10_24265812_24272763_1	chr7	+	1403	12	ISM	ENSMUSG00000051768.10	ENST00000543982.5	1810	16	19085	0	19085	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1673	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACACCTGTGTACGTGC	NA	NA	NA	NA	NA	NA	NA	NA	24265811	24272763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ENSMUSG00000051768.10_24266281_24270576_1	chr7	+	1010	8	ISM	ENSMUSG00000051768.10	ENST00000543982.5	1810	16	19554	2187	19554	-2187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGACATCCCTGACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	24266280	24270576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439
ENSMUSG00000051768.10_24266281_24272865_1	chr7	+	1393	11	ISM	ENSMUSG00000051768.10	ENST00000543982.5	1810	16	19554	-102	19554	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTCTCTTAGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	24266280	24272865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ENSMUSG00000051768.10_24266462_24271724_1	chr7	+	991	8	ISM	ENSMUSG00000051768.10	ENST00000543982.5	1810	16	19735	1039	19735	-1039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTTGTGGGGTGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	24266461	24271724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633
ENSMUSG00000051768.10_24266787_24272749_1	chr7	+	1011	9	ISM	ENSMUSG00000051768.10	ENST00000543982.5	1810	16	20060	14	20060	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCAGGCCTGAGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	24266786	24272749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ENSMUSG00000051853.11_98635580_98636955_1	chr15	-	1252	2	ISM	ENSMUSG00000051853.11	ENST00000256682.9	3430	6	24100	90	24100	-90	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATCCTTGCTCAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	98636955	98635579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98636321_98636444
ENSMUSG00000051853.11_98635837_98637250_1	chr15	-	1290	2	ISM	ENSMUSG00000051853.11	ENST00000256682.9	3430	6	23805	347	23805	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGAGGTGGGGGTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	98637250	98635836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98636321_98636444
ENSMUSG00000051853.11_98636434_98639287_1	chr15	-	2150	3	ISM	ENSMUSG00000051853.11	ENST00000256682.9	3430	6	21768	944	21768	-944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTGTGTGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	98639287	98636433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98638376_98638871_98638997_98639204
ENSMUSG00000051853.11_98636648_98640662_1	chr15	-	2153	4	ISM	ENSMUSG00000051853.11	ENST00000256682.9	3430	6	20393	1158	20393	-1158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTCTATAGCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	98640662	98636647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473
ENSMUSG00000051853.11_98636755_98660952_1	chr15	-	2186	5	FSM	ENSMUSG00000051853.11	ENSMUST00000053183.12	4566	5	140	2240	103	-1265	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTCTGCTAAGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	98660952	98636754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ENSMUSG00000051853.11_98636822_98660994_1	chr15	-	2161	5	FSM	ENSMUSG00000051853.11	ENSMUST00000053183.12	4566	5	98	2307	61	-1332	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGGCTGTTCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	98660994	98636821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ENSMUSG00000051853.11_98636900_98661095_1	chr15	-	2184	5	FSM	ENSMUSG00000051853.11	ENSMUST00000053183.12	4566	5	-3	2385	-3	-1410	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGCTGCTGCTGCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	98661095	98636899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ENSMUSG00000051855.16_30738054_30745905_1	chr6	+	1081	10	ISM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	5	2556	2	-2556	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATTTGTGCATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	30738053	30745905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828
ENSMUSG00000051855.16_30738185_30747106_1	chr6	+	1070	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	136	1355	133	-1355	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCTAGAGGATCCCATG	NA	NA	NA	NA	NA	NA	NA	NA	30738184	30747106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ENSMUSG00000051855.16_30738260_30747138_1	chr6	+	1027	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	211	1323	208	-1323	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATATGGGCTTCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	30738259	30747138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ENSMUSG00000051855.16_30738300_30747202_1	chr6	+	1051	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	251	1259	248	-1259	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTCGTATCTGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	30738299	30747202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ENSMUSG00000051855.16_30740666_30747306_1	chr6	+	1123	11	ISM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	2617	1155	2614	-1155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTACAGGAATCAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	30740665	30747306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ENSMUSG00000051855.16_30740781_30747420_1	chr6	+	1122	11	ISM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	2732	1041	2729	-1041	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGTTTTGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	30740780	30747420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ENSMUSG00000051855.16_30742088_30747420_1	chr6	+	1131	10	ISM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	4039	1041	4036	-1041	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGTTTTGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	30742087	30747420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ENSMUSG00000051855.16_30742757_30747562_1	chr6	+	1021	8	ISM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	4708	899	4705	-899	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACTTTATTAAAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	30742756	30747562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ENSMUSG00000051855.16_30743010_30747737_1	chr6	+	1104	7	ISM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	4961	724	4958	-724	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACAGACATTGGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	30743009	30747737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ENSMUSG00000051855.16_30745842_30747968_1	chr6	+	1046	3	ISM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	7793	493	7790	-493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAGAATTTGTGAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	30745841	30747968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_30745906_30746260_30746325_30747050
ENSMUSG00000051855.16_30746287_30748077_1	chr6	+	1065	2	ISM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	8238	384	8235	-384	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAGCTGAATAGTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	30746286	30748077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_30746325_30747050
ENSMUSG00000051864.11_86098660_86381167_1	chr15	+	1692	13	FSM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	0	1537	0	-364	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTAGGGATAGCATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	86098659	86381167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ENSMUSG00000051864.11_86098763_86381240_1	chr15	+	1662	13	FSM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	103	1464	82	-291	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAGTGGACCCAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	86098762	86381240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ENSMUSG00000051864.11_86119706_86381380_1	chr15	+	1681	11	ISM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	21046	1324	21025	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGCCCTCCCTACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	86119705	86381380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ENSMUSG00000051864.11_86119832_86381473_1	chr15	+	1648	11	ISM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	21172	1231	21151	-58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATCTCAAGCCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	86119831	86381473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ENSMUSG00000051864.11_86119897_86381529_1	chr15	+	1639	11	ISM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	21237	1175	21216	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCCAGAAAACAATGCCG	NA	NA	NA	NA	NA	NA	NA	NA	86119896	86381529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ENSMUSG00000051864.11_86123316_86381688_1	chr15	+	1642	10	ISM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	24656	1016	24635	157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTTCTCACGGTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	86123315	86381688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ENSMUSG00000051864.11_86123372_86381740_1	chr15	+	1638	10	ISM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	24712	964	24691	209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGGTGAGGAAAAGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	86123371	86381740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ENSMUSG00000051864.11_86123424_86381813_1	chr15	+	1659	10	ISM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	24764	891	24743	282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGGCCCAAACTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	86123423	86381813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ENSMUSG00000051864.11_86183944_86382046_1	chr15	+	1654	8	ISM	ENSMUSG00000051864.11	ENST00000355704.7	1801	11	85263	-515	85263	515	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCACCAGGCTGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	86183943	86382046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ENSMUSG00000051864.11_86235944_86382339_1	chr15	+	1647	5	ISM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	137284	365	137263	-365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGCAGAGGGACATGCT	NA	NA	NA	NA	NA	NA	NA	NA	86235943	86382339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ENSMUSG00000051864.11_86275317_86382511_1	chr15	+	1683	3	ISM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	176657	193	176636	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTATGAGATGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	86275316	86382511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_86275406_86333392_86333489_86381013
ENSMUSG00000051910.14_115076046_115301020_1	chr7	-	2149	13	ISM	ENSMUSG00000051910.14	ENSMUST00000206369.2	2863	16	144355	153	122925	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAGCAGAATGGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	115301020	115076045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_115076457_115085782_115086000_115088897_115089132_115111895_115112005_115140856_115141042_115143704_115143889_115149244_115149395_115178250_115178374_115179799_115179880_115196730_115196855_115258750_115258820_115261506_115261680_115300930
ENSMUSG00000051910.14_115076046_115301021_1	chr7	-	2141	13	NNC	ENSMUSG00000051910.14	novel	2825	16	NA	NA	122924	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAGCAGAATGGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	115301021	115076045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_115076457_115085782_115086000_115088897_115089132_115111895_115112005_115140856_115141042_115143704_115143889_115149244_115149395_115178250_115178374_115179799_115179880_115196730_115196846_115258750_115258820_115261506_115261680_115300930
ENSMUSG00000051910.14_115076046_115301021_2	chr7	-	2142	13	NNC	ENSMUSG00000051910.14	novel	2825	16	NA	NA	122924	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAGCAGAATGGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	115301021	115076045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_115076457_115085782_115086000_115088897_115089132_115111895_115112000_115140856_115141042_115143704_115143889_115149244_115149395_115178250_115178374_115179799_115179880_115196730_115196852_115258750_115258820_115261506_115261680_115300930
ENSMUSG00000051910.14_115076311_115400651_1	chr7	-	2140	15	ISM	ENSMUSG00000051910.14	ENSMUST00000206369.2	2863	16	44724	418	23294	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCACGTATGGTATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	115400651	115076310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_115076457_115085782_115086000_115088897_115089132_115111895_115112005_115140856_115141042_115143704_115143889_115149244_115149395_115178250_115178374_115179799_115179880_115196730_115196855_115258750_115258820_115261506_115261680_115300930_115301021_115376285_115376494_115400603
ENSMUSG00000051910.14_115076324_115400633_1	chr7	-	2109	15	ISM	ENSMUSG00000051910.14	ENSMUST00000206369.2	2863	16	44742	431	23312	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCTGTCATCCAGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	115400633	115076323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_115076457_115085782_115086000_115088897_115089132_115111895_115112005_115140856_115141042_115143704_115143889_115149244_115149395_115178250_115178374_115179799_115179880_115196730_115196855_115258750_115258820_115261506_115261680_115300930_115301021_115376285_115376494_115400603
ENSMUSG00000051910.14_115076328_115400651_1	chr7	-	2123	15	ISM	ENSMUSG00000051910.14	ENSMUST00000206369.2	2863	16	44724	435	23294	-281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTCCCTGTCATCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	115400651	115076327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_115076457_115085782_115086000_115088897_115089132_115111895_115112005_115140856_115141042_115143704_115143889_115149244_115149395_115178250_115178374_115179799_115179880_115196730_115196855_115258750_115258820_115261506_115261680_115300930_115301021_115376285_115376494_115400603
ENSMUSG00000051910.14_115076361_115400694_1	chr7	-	2125	15	NNC	ENSMUSG00000051910.14	novel	2825	16	NA	NA	23251	-314	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCTCTAGCACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	115400694	115076360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_115076457_115085782_115086000_115088897_115089132_115111895_115112000_115140856_115141042_115143704_115143889_115149244_115149395_115178250_115178374_115179799_115179880_115196730_115196852_115258750_115258820_115261506_115261680_115300930_115301021_115376285_115376494_115400603
ENSMUSG00000051910.14_115076363_115400703_1	chr7	-	2131	15	NNC	ENSMUSG00000051910.14	novel	2825	16	NA	NA	23242	-316	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGCTCTAGCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	115400703	115076362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_115076457_115085782_115086000_115088897_115089132_115111895_115112005_115140856_115141042_115143704_115143889_115149244_115149395_115178250_115178374_115179799_115179880_115196730_115196846_115258750_115258820_115261506_115261680_115300930_115301021_115376285_115376494_115400603
ENSMUSG00000051910.14_115076379_115400705_1	chr7	-	2126	15	ISM	ENSMUSG00000051910.14	ENSMUST00000206369.2	2863	16	44670	486	23240	-332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACCTCAGATGACATCTG	NA	NA	NA	NA	NA	NA	NA	NA	115400705	115076378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_115076457_115085782_115086000_115088897_115089132_115111895_115112005_115140856_115141042_115143704_115143889_115149244_115149395_115178250_115178374_115179799_115179880_115196730_115196855_115258750_115258820_115261506_115261680_115300930_115301021_115376285_115376494_115400603
ENSMUSG00000051910.14_115076381_115400677_1	chr7	-	2096	15	ISM	ENSMUSG00000051910.14	ENSMUST00000206369.2	2863	16	44698	488	23268	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCACCTCAGATGACATC	NA	NA	NA	NA	NA	NA	NA	NA	115400677	115076380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_115076457_115085782_115086000_115088897_115089132_115111895_115112005_115140856_115141042_115143704_115143889_115149244_115149395_115178250_115178374_115179799_115179880_115196730_115196855_115258750_115258820_115261506_115261680_115300930_115301021_115376285_115376494_115400603
ENSMUSG00000051910.14_115076388_115400696_1	chr7	-	2108	15	ISM	ENSMUSG00000051910.14	ENSMUST00000206369.2	2863	16	44679	495	23249	-341	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCACACCATCACCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	115400696	115076387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_115076457_115085782_115086000_115088897_115089132_115111895_115112005_115140856_115141042_115143704_115143889_115149244_115149395_115178250_115178374_115179799_115179880_115196730_115196855_115258750_115258820_115261506_115261680_115300930_115301021_115376285_115376494_115400603
ENSMUSG00000051910.14_115076401_115400706_1	chr7	-	2096	15	NNC	ENSMUSG00000051910.14	novel	2825	16	NA	NA	23239	-354	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTATGGCAACGACCACA	NA	NA	NA	NA	NA	NA	NA	NA	115400706	115076400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_115076457_115085782_115086000_115088897_115089132_115111895_115112005_115140856_115141042_115143704_115143889_115149250_115149395_115178250_115178374_115179799_115179880_115196730_115196852_115258750_115258820_115261506_115261680_115300930_115301021_115376285_115376494_115400603
ENSMUSG00000051910.14_115076436_115400723_1	chr7	-	2087	15	ISM	ENSMUSG00000051910.14	ENSMUST00000206369.2	2863	16	44652	543	23222	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACAGGAACAGGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	115400723	115076435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_115076457_115085782_115086000_115088897_115089132_115111895_115112005_115140856_115141042_115143704_115143889_115149244_115149395_115178250_115178374_115179799_115179880_115196730_115196855_115258750_115258820_115261506_115261680_115300930_115301021_115376285_115376494_115400603
ENSMUSG00000051910.14_115085782_115400846_1	chr7	-	2181	14	NNC	ENSMUSG00000051910.14	novel	2825	16	NA	NA	23099	-9735	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTACTCCCAAGTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	115400846	115085781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_115086000_115088897_115089132_115111895_115112005_115140856_115141042_115143704_115143889_115149244_115149395_115178250_115178374_115179799_115179880_115196730_115196846_115258750_115258820_115261506_115261680_115300930_115301021_115376285_115376494_115400603
ENSMUSG00000051910.14_115085906_115465081_1	chr7	-	2110	15	NIC	ENSMUSG00000051910.14	novel	2658	16	NA	NA	18	-9859	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAAGTACAAACCCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	115465081	115085905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_115086000_115088897_115089132_115111895_115112005_115140856_115141042_115143704_115143889_115149244_115149395_115178250_115178374_115179799_115179880_115196730_115196855_115258750_115258820_115261506_115261680_115300930_115301021_115376285_115376494_115400603_115400845_115465035
ENSMUSG00000051934.6_99024703_99110108_1	chr15	+	1884	13	FSM	ENSMUSG00000051934.6	ENST00000552918.6	2734	13	34	816	34	-816	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCGCCCTTACTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	99024702	99110108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_99024781_99047484_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ENSMUSG00000051934.6_99047569_99110243_1	chr15	+	1857	12	ISM	ENSMUSG00000051934.6	ENST00000552918.6	2734	13	22900	681	22900	-681	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATTCCAGTTAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	99047568	99110243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ENSMUSG00000051934.6_99047650_99110319_1	chr15	+	1852	12	ISM	ENSMUSG00000051934.6	ENST00000552918.6	2734	13	22981	605	22981	-605	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAATAACAAAAAGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	99047649	99110319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ENSMUSG00000051934.6_99064969_99110497_1	chr15	+	1860	11	ISM	ENSMUSG00000051934.6	ENST00000552918.6	2734	13	40300	427	40300	-427	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCAAAGGTGAGCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	99064968	99110497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ENSMUSG00000051934.6_99071377_99110670_1	chr15	+	1867	10	ISM	ENSMUSG00000051934.6	ENST00000552918.6	2734	13	46708	254	46708	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACACTACTGGGTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	99071376	99110670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ENSMUSG00000051934.6_99076271_99110809_1	chr15	+	1858	8	ISM	ENSMUSG00000051934.6	ENST00000552918.6	2734	13	51602	115	51602	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCAGTTTCTTCCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	99076270	99110809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ENSMUSG00000051934.6_99076330_99110864_1	chr15	+	1854	8	ISM	ENSMUSG00000051934.6	ENST00000552918.6	2734	13	51661	60	51661	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGCCTAAGGAAATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	99076329	99110864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ENSMUSG00000051950.11_149658872_149677589_1	chr5	+	547	6	ISM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	57177	8475	57177	-8475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGACGCTCCGGACGACA	NA	NA	NA	NA	NA	NA	NA	NA	149658871	149677589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529
ENSMUSG00000051950.11_149673929_149683216_1	chr5	+	545	3	ISM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	72234	2848	72234	-2848	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGAAAAATCGCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	149673928	149683216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_149674016_149677529_149677675_149682903
ENSMUSG00000051978.10_14077561_14080785_1	chr8	-	786	2	ISM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	59516	0	59516	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATATTTGTGATAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	14080785	14077560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_14078154_14080592
ENSMUSG00000051978.10_14077681_14083487_1	chr8	-	817	3	ISM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	56814	120	56814	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCAATTTACTTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	14083487	14077680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_14078154_14080592_14080785_14083335
ENSMUSG00000051978.10_14077851_14083647_1	chr8	-	807	3	ISM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	56654	290	56654	-290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAACTCAGACTTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	14083647	14077850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_14078154_14080592_14080785_14083335
ENSMUSG00000051978.10_14077917_14083712_1	chr8	-	806	3	ISM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	56589	356	56589	-356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAACCAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	14083712	14077916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_14078154_14080592_14080785_14083335
ENSMUSG00000051978.10_14078066_14114298_1	chr8	-	803	4	ISM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	26003	505	26003	-505	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGAGCTGTCATGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	14114298	14078065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204
ENSMUSG00000052033.14_170353155_170360782_1	chr2	+	674	4	FSM	ENSMUSG00000052033.14	ENSMUST00000063682.12	935	4	0	261	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTTCCCTTCTCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	170353154	170360782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_170353390_170357658_170357767_170358469_170358611_170360592
ENSMUSG00000052033.14_170353365_170360987_1	chr2	+	669	4	FSM	ENSMUSG00000052033.14	ENSMUST00000063682.12	935	4	210	56	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTCTCTATATTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	170353364	170360987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_170353390_170357658_170357767_170358469_170358611_170360592
ENSMUSG00000052040.11_63536099_63588663_1	chr7	-	6391	2	NNC	ENSMUSG00000052040.11	novel	6396	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGCCTCGGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	63588663	63536098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_63541541_63587714
ENSMUSG00000052085.8_25098500_25131555_1	chr19	+	1323	11	FSM	ENSMUSG00000052085.8	ENST00000382331.5	1458	11	23	112	23	-112	multi-exon	TRUE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTCCTGAGGATCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	25098499	25131555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_25098549_25100503_25100606_25104431_25104528_25104839_25105075_25107714_25107880_25109427_25109601_25114680_25114777_25117432_25117529_25124658_25124809_25127146_25127261_25131508
ENSMUSG00000052085.8_25100504_25131693_1	chr19	+	1412	10	ISM	ENSMUSG00000052085.8	ENST00000382331.5	1458	11	2027	-26	2027	26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTTTGTTAATTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	25100503	25131693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_25100606_25104431_25104528_25104839_25105075_25107714_25107880_25109427_25109601_25114680_25114777_25117432_25117529_25124658_25124809_25127146_25127261_25131508
ENSMUSG00000052099.15_64332390_64334955_1	chr14	+	719	4	FSM	ENSMUSG00000052099.15	ENST00000647727.1	719	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCCTGGAGGAGACACAAA	NA	NA	NA	NA	NA	NA	NA	NA	64332389	64334955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_64332572_64333358_64333619_64334506_64334644_64334815
ENSMUSG00000052099.15_64332390_64334955_2	chr14	+	713	4	NNC	ENSMUSG00000052099.15	novel	719	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCCTGGAGGAGACACAAA	NA	NA	NA	NA	NA	NA	NA	NA	64332389	64334955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_64332572_64333358_64333619_64334512_64334644_64334815
ENSMUSG00000052099.15_64332390_64334955_3	chr14	+	714	4	NNC	ENSMUSG00000052099.15	novel	719	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCCTGGAGGAGACACAAA	NA	NA	NA	NA	NA	NA	NA	NA	64332389	64334955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_64332572_64333363_64333619_64334506_64334644_64334815
ENSMUSG00000052102.16_38461867_38463665_1	chr18	-	287	2	ISM	ENSMUSG00000052102.16	ENSMUST00000235590.2	2085	6	8364	1264	8364	-1256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGTAGGAGAGAGAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	38463665	38461866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38462027_38463538
ENSMUSG00000052102.16_38463571_38465177_1	chr18	-	300	2	ISM	ENSMUSG00000052102.16	ENSMUST00000063814.15	2289	7	6879	2960	6852	-2960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAAAAGTGAAGACAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	38465177	38463570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38463714_38465020
ENSMUSG00000052102.16_38463679_38466263_1	chr18	-	277	3	ISM	ENSMUSG00000052102.16	ENSMUST00000063814.15	2289	7	5793	3068	5766	-3068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTGTACAAAGCCATCG	NA	NA	NA	NA	NA	NA	NA	NA	38466263	38463678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38463714_38465020_38465206_38466206
ENSMUSG00000052102.16_38465141_38468131_1	chr18	-	311	3	ISM	ENSMUSG00000052102.16	ENSMUST00000063814.15	2289	7	3925	4530	3898	-4530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGACTCTGGCTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	38468131	38465140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38465206_38466206_38466390_38468068
ENSMUSG00000052102.16_38466242_38471191_1	chr18	-	298	3	ISM	ENSMUSG00000052102.16	ENSMUST00000235590.2	2085	6	838	5639	838	-5631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGCCGGAGGGATCG	NA	NA	NA	NA	NA	NA	NA	NA	38471191	38466241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38466390_38468068_38468171_38471143
ENSMUSG00000052102.16_38468067_38471962_1	chr18	-	238	3	ISM	ENSMUSG00000052102.16	ENSMUST00000235590.2	2085	6	67	7464	67	-7456	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCCTTTCATGTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	38471962	38468066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_38468171_38471143_38471276_38471960
ENSMUSG00000052105.18_66643983_66647537_1	chr17	-	1226	2	ISM	ENSMUSG00000052105.18	ENST00000359865.7	5953	15	97851	-8	97851	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACAGGGTCTTGGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	66647537	66643982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66645150_66647478
ENSMUSG00000052105.18_66643983_66665184_1	chr17	-	3498	7	ISM	ENSMUSG00000052105.18	ENST00000359865.7	5953	15	80204	-8	80204	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACAGGGTCTTGGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	66665184	66643982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66645150_66647478_66647536_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016
ENSMUSG00000052105.18_66644122_66673378_1	chr17	-	3399	8	ISM	ENSMUSG00000052105.18	ENST00000359865.7	5953	15	72010	131	72010	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCTCACTTGACATTT	NA	NA	NA	NA	NA	NA	NA	NA	66673378	66644121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66645150_66647478_66647536_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338
ENSMUSG00000052105.18_66644153_66673449_1	chr17	-	3439	8	ISM	ENSMUSG00000052105.18	ENST00000359865.7	5953	15	71939	162	71939	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTATTGTTAAAACATTA	NA	NA	NA	NA	NA	NA	NA	NA	66673449	66644152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66645150_66647478_66647536_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338
ENSMUSG00000052105.18_66644219_66673503_1	chr17	-	3427	8	ISM	ENSMUSG00000052105.18	ENST00000359865.7	5953	15	71885	228	71885	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1078	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTACCGTGTGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	66673503	66644218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66645150_66647478_66647536_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338
ENSMUSG00000052105.18_66644396_66675377_1	chr17	-	3436	9	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	81368	415	70011	277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1043	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATGCAGGCCAACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	66675377	66644395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66645150_66647478_66647536_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224
ENSMUSG00000052105.18_66644673_66685053_1	chr17	-	3443	10	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	71692	692	60335	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	926	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAATAAGGTATAAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	66685053	66644672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66645150_66647478_66647536_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847
ENSMUSG00000052105.18_66644800_66686272_1	chr17	-	3418	11	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	70473	819	59116	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAACCTGGTAAACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	66686272	66644799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66645150_66647478_66647536_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123
ENSMUSG00000052105.18_66644921_66686385_1	chr17	-	3410	11	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	70360	940	59003	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	777	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCACTGTAATTTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	66686385	66644920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66645150_66647478_66647536_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123
ENSMUSG00000052105.18_66644978_66686456_1	chr17	-	3424	11	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	70289	997	58932	-305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGGAGAAGCCACACCTG	NA	NA	NA	NA	NA	NA	NA	NA	66686456	66644977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66645150_66647478_66647536_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123
ENSMUSG00000052105.18_66647478_66686626_1	chr17	-	3423	10	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	70119	3497	58762	19	internal_fragment	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGCTTCTTCCCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	66686626	66647477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66647536_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123
ENSMUSG00000052105.18_66649866_66686713_1	chr17	-	3407	9	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	70032	5885	58675	-2369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACACTGGAGAACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	66686713	66649865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123
ENSMUSG00000052105.18_66650941_66745242_1	chr17	-	3350	12	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	11503	6960	146	-3444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTATAGCATCAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	66745242	66650940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161
ENSMUSG00000052105.18_66650941_66745320_1	chr17	-	3428	12	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	11425	6960	68	-3444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTATAGCATCAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	66745320	66650940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161
ENSMUSG00000052105.18_66650941_66745370_1	chr17	-	3478	12	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	11375	6960	18	-3444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTATAGCATCAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	66745370	66650940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161
ENSMUSG00000052105.18_66655465_66686185_1	chr17	-	1248	8	ISM	ENSMUSG00000052105.18	ENSMUST00000177034.2	5441	16	59842	10792	59203	-7968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGACGACACACGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	66686185	66655464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66678317_66678441_66684847_66685007_66686123
ENSMUSG00000052105.18_66661365_66686433_1	chr17	-	1197	7	ISM	ENSMUSG00000052105.18	ENSMUST00000177034.2	5441	16	59594	16692	58955	-13868	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACTGAGAAAAGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	66686433	66661364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66678317_66678441_66684847_66685007_66686123
ENSMUSG00000052105.18_66673339_66686719_1	chr17	-	1307	5	ISM	ENSMUSG00000052105.18	ENSMUST00000177034.2	5441	16	59308	28666	58669	-25842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGCCTAGCTCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	66686719	66673338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66673537_66675224_66675456_66678317_66678441_66684847_66685007_66686123
ENSMUSG00000052105.18_66673339_66686767_1	chr17	-	1355	5	ISM	ENSMUSG00000052105.18	ENSMUST00000177034.2	5441	16	59260	28666	58621	-25842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGCCTAGCTCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	66686767	66673338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66673537_66675224_66675456_66678317_66678441_66684847_66685007_66686123
ENSMUSG00000052105.18_66673476_66686825_1	chr17	-	1276	5	ISM	ENSMUSG00000052105.18	ENSMUST00000177034.2	5441	16	59202	28803	58563	-25979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGGGATAGACCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	66686825	66673475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66673537_66675224_66675456_66678317_66678441_66684847_66685007_66686123
ENSMUSG00000052105.18_66675331_66686977_1	chr17	-	1261	4	ISM	ENSMUSG00000052105.18	ENSMUST00000177034.2	5441	16	59050	30658	58411	-27834	internal_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCCTGAAGCAGAACATCT	NA	NA	NA	NA	NA	NA	NA	NA	66686977	66675330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66675456_66678317_66678441_66684847_66685007_66686123
ENSMUSG00000052105.18_66675383_66687029_1	chr17	-	1261	4	ISM	ENSMUSG00000052105.18	ENSMUST00000177034.2	5441	16	58998	30710	58359	-27886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAAGCGGACGTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	66687029	66675382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66675456_66678317_66678441_66684847_66685007_66686123
ENSMUSG00000052105.18_66678354_66687157_1	chr17	-	1280	3	ISM	ENSMUSG00000052105.18	ENSMUST00000177034.2	5441	16	58870	33681	58231	-30857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAGACAGAGACATACAC	NA	NA	NA	NA	NA	NA	NA	NA	66687157	66678353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66678441_66684847_66685007_66686123
ENSMUSG00000052105.18_66686505_66745266_1	chr17	-	1251	4	ISM	ENSMUSG00000052105.18	ENSMUST00000177034.2	5441	16	761	41832	122	-39008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATACCGAGTGCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	66745266	66686504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66687432_66692854_66692915_66743074_66743234_66745161
ENSMUSG00000052105.18_66686552_66745323_1	chr17	-	1261	4	ISM	ENSMUSG00000052105.18	ENSMUST00000177034.2	5441	16	704	41879	65	-39055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCGGAGGCTAGTGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	66745323	66686551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_66687432_66692854_66692915_66743074_66743234_66745161
ENSMUSG00000052133.17_35361732_35466180_1	chr16	+	753	6	ISM	ENSMUSG00000052133.17	ENSMUST00000120756.8	4646	21	0	18451	0	-18443	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGCCGTCAAGAGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	35361731	35466180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081
ENSMUSG00000052133.17_35361941_35466775_1	chr16	+	758	7	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	0	17856	0	-17848	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGGCCCAGGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	35361940	35466775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561
ENSMUSG00000052133.17_35442994_35467433_1	chr16	+	699	7	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	81053	17198	81053	-17190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACATCGGGCTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	35442993	35467433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413
ENSMUSG00000052133.17_35443036_35467502_1	chr16	+	726	7	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	81095	17129	81095	-17121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTACTCTCGGGTGGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	35443035	35467502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413
ENSMUSG00000052133.17_35443080_35467566_1	chr16	+	746	7	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	81139	17065	81139	-17057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGGACCACATTCATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	35443079	35467566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413
ENSMUSG00000052133.17_35448378_35467699_1	chr16	+	810	6	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	86437	16932	86437	-16924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTCCCCACCCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	35448377	35467699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413
ENSMUSG00000052133.17_35465750_35470237_1	chr16	+	801	5	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	103809	14394	103809	-14386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACAGCTTCTCCTCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	35465749	35470237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101
ENSMUSG00000052133.17_35466150_35471550_1	chr16	+	711	5	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	104209	13081	104209	-13073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAGCCTGCAGGACGCAC	NA	NA	NA	NA	NA	NA	NA	NA	35466149	35471550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506
ENSMUSG00000052133.17_35466726_35471881_1	chr16	+	712	5	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	104785	12750	104785	-12742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCGCAGCCTCCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	35466725	35471881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849
ENSMUSG00000052133.17_35467544_35478595_1	chr16	+	737	5	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	105603	6036	105603	-6028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCTGGGATGGGAAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	35467543	35478595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566
ENSMUSG00000052133.17_35467595_35478658_1	chr16	+	749	5	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	105654	5973	105654	-5965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATCCAGAACATCACAACC	NA	NA	NA	NA	NA	NA	NA	NA	35467594	35478658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566
ENSMUSG00000052133.17_35470102_35478857_1	chr16	+	718	5	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	108161	5774	108161	-5766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCGTGTGAGCACTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	35470101	35478857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809
ENSMUSG00000052133.17_35471556_35480042_1	chr16	+	690	5	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	109615	4589	109615	-4581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGGGCTCAGTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	35471555	35480042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019
ENSMUSG00000052133.17_35471599_35480106_1	chr16	+	711	5	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	109658	4525	109658	-4517	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCCGGCGCCCCGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	35471598	35480106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019
ENSMUSG00000052133.17_35471645_35480163_1	chr16	+	722	5	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	109704	4468	109704	-4460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTACCTGTGGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	35471644	35480163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019
ENSMUSG00000052133.17_35471849_35480440_1	chr16	+	801	5	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	109908	4191	109908	-4183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGTCGCGGGGCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	35471848	35480440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292
ENSMUSG00000052133.17_35472003_35480650_1	chr16	+	770	6	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	110062	3981	110062	-3973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCGCGCCGCTGCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	35472002	35480650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527
ENSMUSG00000052133.17_35478955_35481068_1	chr16	+	774	5	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	117014	3563	117014	-3555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGTTGTGGAAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	35478954	35481068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35478992_35480019_35480164_35480292_35480441_35480527_35480754_35480849
ENSMUSG00000052133.17_35480016_35481832_1	chr16	+	804	5	ISM	ENSMUSG00000052133.17	ENST00000195173.8	4561	22	118402	2791	118075	-2791	internal_fragment	TRUE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGGGCGCATCGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	35480015	35481832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481769
ENSMUSG00000052133.17_35480292_35481981_1	chr16	+	703	5	ISM	ENSMUSG00000052133.17	ENST00000195173.8	4561	22	118678	2642	118351	-2642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGAGCCGGAGCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	35480291	35481981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35480441_35480527_35480754_35480849_35481069_35481769_35481833_35481935
ENSMUSG00000052133.17_35480402_35481710_1	chr16	+	533	4	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	118461	2921	118461	-2913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTGGTGGCCACTATC	NA	NA	NA	NA	NA	NA	NA	NA	35480401	35481710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35480441_35480527_35480754_35480849_35481069_35481661
ENSMUSG00000052133.17_35480574_35483116_1	chr16	+	711	6	ISM	ENSMUSG00000052133.17	ENST00000195173.8	4561	22	118960	1507	118633	-1507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTTGACCTTGGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	35480573	35483116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35480754_35480849_35481069_35481769_35481833_35481935_35482086_35482659_35482705_35483062
ENSMUSG00000052133.17_35480624_35483167_1	chr16	+	712	6	ISM	ENSMUSG00000052133.17	ENST00000195173.8	4561	22	119010	1456	118683	-1456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGAGTCCACGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	35480623	35483167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35480754_35480849_35481069_35481769_35481833_35481935_35482086_35482659_35482705_35483062
ENSMUSG00000052133.17_35480625_35481951_1	chr16	+	535	4	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	118684	2680	118684	-2672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGTGGGGTGTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	35480624	35481951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35480754_35480849_35481069_35481661_35481833_35481935
ENSMUSG00000052133.17_35480667_35483234_1	chr16	+	736	6	ISM	ENSMUSG00000052133.17	ENST00000195173.8	4561	22	119053	1389	118726	-1389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAATGAGAAGTACACCC	NA	NA	NA	NA	NA	NA	NA	NA	35480666	35483234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35480754_35480849_35481069_35481769_35481833_35481935_35482086_35482659_35482705_35483062
ENSMUSG00000052133.17_35480687_35482015_1	chr16	+	537	4	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	118746	2616	118746	-2608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGGACCAGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	35480686	35482015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35480754_35480849_35481069_35481661_35481833_35481935
ENSMUSG00000052133.17_35480875_35483532_1	chr16	+	704	6	ISM	ENSMUSG00000052133.17	ENST00000195173.8	4561	22	119261	1091	118934	-1091	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACTGCAGCAGACCAAT	NA	NA	NA	NA	NA	NA	NA	NA	35480874	35483532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35481069_35481769_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ENSMUSG00000052133.17_35480920_35483080_1	chr16	+	533	5	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	118979	1551	118979	-1543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGTCACTGGTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	35480919	35483080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062
ENSMUSG00000052133.17_35480926_35483684_1	chr16	+	805	6	ISM	ENSMUSG00000052133.17	ENST00000195173.8	4561	22	119312	939	118985	-939	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGAAGAGTGGAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	35480925	35483684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35481069_35481769_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ENSMUSG00000052133.17_35480974_35483128_1	chr16	+	527	5	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	119033	1503	119033	-1495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGTGTACCTGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	35480973	35483128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062
ENSMUSG00000052133.17_35480993_35483684_1	chr16	+	738	6	ISM	ENSMUSG00000052133.17	ENST00000195173.8	4561	22	119379	939	119052	-939	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGAAGAGTGGAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	35480992	35483684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35481069_35481769_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ENSMUSG00000052133.17_35481026_35483178_1	chr16	+	525	5	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	119085	1453	119085	-1445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTTGTCCATCCTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	35481025	35483178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062
ENSMUSG00000052139.19_31988430_32158755_1	chr5	+	235	3	ISM	ENSMUSG00000052139.19	ENSMUST00000063813.11	1410	14	133036	83328	133036	-83328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTCATTGATTATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	31988429	32158755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31988504_32058398_32058509_32158704
ENSMUSG00000052144.9_100810583_100843379_1	chr6	+	1358	9	FSM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	0	3516	0	-3508	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGCAGGGGCCTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	100810582	100843379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ENSMUSG00000052144.9_100810790_100843507_1	chr6	+	1279	9	FSM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	207	3388	183	-3380	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACAGATGACCCAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	100810789	100843507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ENSMUSG00000052144.9_100811676_100843684_1	chr6	+	1369	8	ISM	ENSMUSG00000052144.9	ENST00000356692.10	4770	10	1069	3203	1069	-3203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGAAGAGCTGTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	100811675	100843684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ENSMUSG00000052144.9_100838402_100843880_1	chr6	+	1279	6	ISM	ENSMUSG00000052144.9	ENST00000356692.10	4770	10	27795	3007	27795	-3007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTTTATACATACACAA	NA	NA	NA	NA	NA	NA	NA	NA	100838401	100843880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ENSMUSG00000052144.9_100841692_100844084_1	chr6	+	1330	4	ISM	ENSMUSG00000052144.9	ENST00000356692.10	4770	10	31085	2803	31085	-2803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGAGATGAATACAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	100841691	100844084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_100841715_100842034_100842179_100842748_100843045_100843217
ENSMUSG00000052144.9_100842746_100844230_1	chr6	+	1312	2	ISM	ENSMUSG00000052144.9	ENST00000356692.10	4770	10	32139	2657	32139	-2657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACACATTCCAAGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	100842745	100844230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_100843045_100843217
ENSMUSG00000052144.9_100844932_100846310_1	chr6	+	1307	2	ISM	ENSMUSG00000052144.9	ENST00000356692.10	4770	10	34325	577	34325	-577	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTGGCTTTCGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	100844931	100846310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_100845343_100845414
ENSMUSG00000052146.17_27849396_27853228_1	chr17	-	402	4	ISM	ENSMUSG00000052146.17	ENSMUST00000178774.3	498	5	221	-43	221	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCACTTGTGTATGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	27853228	27849395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045
ENSMUSG00000052146.17_27849396_27853450_1	chr17	-	598	5	ISM	ENSMUSG00000052146.17	ENST00000644393.1	623	6	765	-12	-1	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCACTTGTGTATGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	27853450	27849395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27849537_27850173_27850230_27851252_27851331_27853045_27853218_27853299
ENSMUSG00000052146.17_27853047_27854326_1	chr17	-	470	3	ISM	ENSMUSG00000052146.17	ENSMUST00000155071.9	712	5	-124	3104	-111	-3104	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACTGATTCTGATTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	27854326	27853046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27853218_27853299_27853450_27854177
ENSMUSG00000052146.17_27853300_27854519_1	chr17	-	492	2	ISM	ENSMUSG00000052146.17	ENSMUST00000155071.9	712	5	-317	3357	0	-3357	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGAGAGGGACACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	27854519	27853299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27853450_27854177
ENSMUSG00000052151.13_79362269_79369481_1	chr10	-	1453	6	FSM	ENSMUSG00000052151.13	ENSMUST00000166804.2	1566	6	113	0	110	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCATGCATGTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	79369481	79362268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366816_79369457
ENSMUSG00000052151.13_79362395_79369594_1	chr10	-	1440	6	FSM	ENSMUSG00000052151.13	ENSMUST00000166804.2	1566	6	0	126	0	-126	multi-exon	FALSE	canonical	NA	NA	NA	NA	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATATGGACCAAATGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	79369594	79362394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366816_79369457
ENSMUSG00000052151.13_79362460_79369594_1	chr10	-	1375	6	FSM	ENSMUSG00000052151.13	ENSMUST00000166804.2	1566	6	0	191	0	-191	multi-exon	FALSE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTACCACTCGAGGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	79369594	79362459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366816_79369457
ENSMUSG00000052151.13_79362624_79363461_1	chr10	-	637	2	ISM	ENSMUSG00000052151.13	ENSMUST00000218241.2	825	5	6130	-237	6130	237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAAGGTGATGAACATCT	NA	NA	NA	NA	NA	NA	NA	NA	79363461	79362623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79363083_79363283
ENSMUSG00000052151.13_79362725_79363706_1	chr10	-	593	3	ISM	ENSMUSG00000052151.13	ENSMUST00000218241.2	825	5	5885	-136	5885	136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCCATCTCCAGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	79363706	79362724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79363083_79363283_79363461_79363648
ENSMUSG00000052151.13_79363284_79366785_1	chr10	-	585	4	ISM	ENSMUSG00000052151.13	ENSMUST00000166804.2	1566	6	2809	1015	2806	-423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCCTACTTGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	79366785	79363283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79363461_79363648_79363707_79366331_79366607_79366710
ENSMUSG00000052151.13_79363407_79369594_1	chr10	-	676	5	ISM	ENSMUSG00000052151.13	ENSMUST00000063879.13	1654	6	36	1143	0	-546	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTTCTTCTTGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	79369594	79363406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79369457
ENSMUSG00000052151.13_79363436_79369606_1	chr10	-	659	5	ISM	ENSMUSG00000052151.13	ENSMUST00000063879.13	1654	6	24	1172	-12	-575	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGGGCACGGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79369606	79363435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79369457
ENSMUSG00000052155.6_48704246_48780380_1	chr2	+	582	5	ISM	ENSMUSG00000052155.6	ENST00000535787.5	5081	11	77	12899	-26	-10062	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGATTTGGTTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	48704245	48780380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_48704347_48760363_48760509_48763068_48763179_48763330_48763486_48780309
ENSMUSG00000052155.6_48704299_48783582_1	chr2	+	1007	8	ISM	ENSMUSG00000052155.6	ENST00000404590.1	2338	12	27	6860	27	-6860	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCATGGCTAGAGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	48704298	48783582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_48704347_48704704_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518
ENSMUSG00000052155.6_48704777_48784716_1	chr2	+	1008	8	ISM	ENSMUSG00000052155.6	ENST00000404590.1	2338	12	505	5726	505	-5726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCTTGCATTGCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	48704776	48784716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677
ENSMUSG00000052155.6_48760348_48787012_1	chr2	+	1004	8	ISM	ENSMUSG00000052155.6	ENST00000404590.1	2338	12	56076	3430	56076	-3430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTGGAGGGTGCTATAA	NA	NA	NA	NA	NA	NA	NA	NA	48760347	48787012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983
ENSMUSG00000052155.6_48760376_48787086_1	chr2	+	1050	8	ISM	ENSMUSG00000052155.6	ENST00000404590.1	2338	12	56104	3356	56104	-3356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGAATTGGCTTCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	48760375	48787086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983
ENSMUSG00000052155.6_48760451_48788509_1	chr2	+	1031	9	ISM	ENSMUSG00000052155.6	ENST00000404590.1	2338	12	56179	1933	56179	-1933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCATTTGAGGAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	48760450	48788509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489
ENSMUSG00000052155.6_48763067_48788620_1	chr2	+	1086	8	ISM	ENSMUSG00000052155.6	ENST00000404590.1	2338	12	58795	1822	58795	-1822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTATACACTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	48763066	48788620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489
ENSMUSG00000052155.6_48763331_48789638_1	chr2	+	1007	8	ISM	ENSMUSG00000052155.6	ENST00000404590.1	2338	12	59059	804	59059	-804	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGGATCATGATGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	48763330	48789638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
ENSMUSG00000052155.6_48763371_48789699_1	chr2	+	1028	8	ISM	ENSMUSG00000052155.6	ENST00000404590.1	2338	12	59099	743	59099	-743	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATGCAAAGACTAACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	48763370	48789699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
ENSMUSG00000052155.6_48763428_48789745_1	chr2	+	1017	8	ISM	ENSMUSG00000052155.6	ENST00000404590.1	2338	12	59156	697	59156	-697	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGTCACAATGGTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	48763427	48789745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
ENSMUSG00000052155.6_48780401_48789880_1	chr2	+	1003	7	ISM	ENSMUSG00000052155.6	ENST00000404590.1	2338	12	76129	562	76129	-562	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTGAAATGAGTAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	48780400	48789880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
ENSMUSG00000052155.6_48782178_48789983_1	chr2	+	1016	6	ISM	ENSMUSG00000052155.6	ENST00000404590.1	2338	12	77906	459	77906	-459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCACAGATATGAAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	48782177	48789983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
ENSMUSG00000052155.6_48782221_48790044_1	chr2	+	1034	6	ISM	ENSMUSG00000052155.6	ENST00000404590.1	2338	12	77949	398	77949	-398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTCGAAGAATGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	48782220	48790044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
ENSMUSG00000052155.6_48783625_48790260_1	chr2	+	1080	5	ISM	ENSMUSG00000052155.6	ENST00000404590.1	2338	12	79353	182	79353	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAATGCCAACATGACACA	NA	NA	NA	NA	NA	NA	NA	NA	48783624	48790260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
ENSMUSG00000052155.6_48786982_48790443_1	chr2	+	1110	3	ISM	ENSMUSG00000052155.6	ENST00000404590.1	2338	12	82710	-1	82710	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCCATGTTTTATAACA	NA	NA	NA	NA	NA	NA	NA	NA	48786981	48790443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_48787123_48788489_48788621_48789605
ENSMUSG00000052214.10_18962308_18979040_1	chr7	+	564	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	49	2753	0	-2753	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCCAAGTGCCAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	18962307	18979040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_18962510_18978678
ENSMUSG00000052253.7_25984452_25986951_1	chr15	+	886	2	ISM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	0	11616	0	-11616	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGCAGCGGCTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	25984451	25986951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_25985270_25986883
ENSMUSG00000052253.7_25984452_25986979_1	chr15	+	914	2	ISM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	0	11588	0	-11588	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAGGTGCCATCCCAATA	NA	NA	NA	NA	NA	NA	NA	NA	25984451	25986979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_25985270_25986883
ENSMUSG00000052253.7_25984615_25987109_1	chr15	+	881	2	ISM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	163	11458	163	-11458	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGACTAATTAAATATT	NA	NA	NA	NA	NA	NA	NA	NA	25984614	25987109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_25985270_25986883
ENSMUSG00000052253.7_25984735_25987318_1	chr15	+	856	3	ISM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	283	11249	283	-11249	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTACAGGCACACATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	25984734	25987318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_25985270_25986883_25987133_25987246
ENSMUSG00000052253.7_25984847_25991570_1	chr15	+	867	4	ISM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	395	6997	395	-6997	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGCTGAGCTTGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	25984846	25991570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_25985270_25986883_25987133_25987246_25987410_25991538
ENSMUSG00000052253.7_25984997_25996241_1	chr15	+	848	5	ISM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	545	2326	545	-2326	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCAAGAGCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	25984996	25996241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_25985270_25986883_25987133_25987246_25987410_25991538_25991652_25996191
ENSMUSG00000052253.7_25985105_25997372_1	chr15	+	954	6	FSM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	653	1195	653	-1195	multi-exon	TRUE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCTGAGAGGCTGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	25985104	25997372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_25985270_25986883_25987133_25987246_25987410_25991538_25991652_25996191_25996336_25997252
ENSMUSG00000052253.7_25985171_25997372_1	chr15	+	888	6	FSM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	719	1195	719	-1195	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCTGAGAGGCTGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	25985170	25997372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_25985270_25986883_25987133_25987246_25987410_25991538_25991652_25996191_25996336_25997252
ENSMUSG00000052253.7_25985225_25997386_1	chr15	+	848	6	FSM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	773	1181	773	-1181	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAGATGCATCTCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	25985224	25997386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_25985270_25986883_25987133_25987246_25987410_25991538_25991652_25996191_25996336_25997252
ENSMUSG00000052253.7_25986881_25997513_1	chr15	+	933	5	ISM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	2429	1054	2429	-1054	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCGTATTTGAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	25986880	25997513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_25987133_25987246_25987410_25991538_25991652_25996191_25996336_25997252
ENSMUSG00000052253.7_25987249_25997661_1	chr15	+	827	4	ISM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	2797	906	2797	-906	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAACGCAAGCGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	25987248	25997661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_25987410_25991538_25991652_25996191_25996336_25997252
ENSMUSG00000052253.7_25987288_25997725_1	chr15	+	852	4	ISM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	2836	842	2836	-842	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTAAGGGACCTTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	25987287	25997725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_25987410_25991538_25991652_25996191_25996336_25997252
ENSMUSG00000052253.7_25987342_25997774_1	chr15	+	847	4	ISM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	2890	793	2890	-793	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAATGTCACTTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	25987341	25997774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_25987410_25991538_25991652_25996191_25996336_25997252
ENSMUSG00000052253.7_25991562_25997884_1	chr15	+	866	3	ISM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	7110	683	7110	-683	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATTTCCAAATAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	25991561	25997884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_25991652_25996191_25996336_25997252
ENSMUSG00000052253.7_25991606_25997945_1	chr15	+	883	3	ISM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	7154	622	7154	-622	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAGTTAAATCTCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	25991605	25997945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_25991652_25996191_25996336_25997252
ENSMUSG00000052293.15_100787851_100792568_1	chr13	+	1214	3	NNC	ENSMUSG00000078941.10	novel	1222	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTACTTTGGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	100787850	100792568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_100787954_100790707_100790792_100791541
ENSMUSG00000052298.13_54609667_54614418_1	chr11	-	1018	3	ISM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	64083	1385	64083	-1385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGTGTTCCACTTACT	NA	NA	NA	NA	NA	NA	NA	NA	54614418	54609666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_54610551_54611068_54611184_54614399
ENSMUSG00000052298.13_54609802_54614501_1	chr11	-	966	3	ISM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	64000	1520	64000	-1520	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCGTCCTGTTAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	54614501	54609801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_54610551_54611068_54611184_54614399
ENSMUSG00000052298.13_54610014_54631311_1	chr11	-	1002	4	ISM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	47190	1732	47190	-1732	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTGAGGATGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	54631311	54610013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063
ENSMUSG00000052298.13_54610310_54678451_1	chr11	-	991	6	FSM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	50	2028	50	-2028	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAATTGACATGGATCGG	NA	NA	NA	NA	NA	NA	NA	NA	54678451	54610309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54647231_54647386_54678385
ENSMUSG00000052301.15_126447134_126451574_1	chr7	+	1664	11	FSM	ENSMUSG00000052301.15	ENST00000564944.5	1660	11	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTCCAAATAGAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	126447133	126451574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126447205_126447748_126448035_126448391_126448472_126448653_126448729_126448833_126448944_126450105_126450233_126450311_126450372_126450454_126450619_126450708_126450791_126450880_126450978_126451062
ENSMUSG00000052301.15_126447134_126451574_2	chr7	+	1655	11	NNC	ENSMUSG00000052301.15	novel	1660	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTCCAAATAGAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	126447133	126451574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_126447205_126447748_126448035_126448391_126448472_126448653_126448729_126448842_126448944_126450105_126450233_126450311_126450372_126450454_126450619_126450708_126450791_126450880_126450978_126451062
ENSMUSG00000052301.15_126447134_126451574_3	chr7	+	1658	11	NNC	ENSMUSG00000052301.15	novel	1660	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTCCAAATAGAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	126447133	126451574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_126447205_126447748_126448035_126448391_126448472_126448653_126448729_126448833_126448944_126450105_126450227_126450311_126450372_126450454_126450619_126450708_126450791_126450880_126450978_126451062
ENSMUSG00000052301.15_126447134_126451574_4	chr7	+	1655	11	NNC	ENSMUSG00000052301.15	novel	1660	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTCCAAATAGAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	126447133	126451574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_126447205_126447748_126448035_126448391_126448472_126448662_126448729_126448833_126448944_126450105_126450233_126450311_126450372_126450454_126450619_126450708_126450791_126450880_126450978_126451062
ENSMUSG00000052301.15_126447134_126451574_5	chr7	+	1658	11	NNC	ENSMUSG00000052301.15	novel	1660	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTCCAAATAGAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	126447133	126451574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_126447205_126447748_126448035_126448391_126448472_126448653_126448729_126448833_126448944_126450105_126450233_126450311_126450372_126450460_126450619_126450708_126450791_126450880_126450978_126451062
ENSMUSG00000052301.15_126447134_126451574_6	chr7	+	1662	11	NNC	ENSMUSG00000052301.15	novel	1660	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTCCAAATAGAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	126447133	126451574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_126447205_126447748_126448035_126448393_126448472_126448653_126448729_126448833_126448944_126450105_126450233_126450311_126450372_126450454_126450619_126450708_126450791_126450880_126450978_126451062
ENSMUSG00000052301.15_126447134_126451574_7	chr7	+	1656	11	NNC	ENSMUSG00000052301.15	novel	1660	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTCCAAATAGAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	126447133	126451574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_126447205_126447748_126448035_126448391_126448472_126448653_126448729_126448833_126448936_126450105_126450233_126450311_126450372_126450454_126450619_126450708_126450791_126450880_126450978_126451062
ENSMUSG00000052310.10_90155479_90160326_1	chr3	+	1771	4	FSM	ENSMUSG00000052310.10	ENSMUST00000015467.9	2364	4	0	593	0	-589	multi-exon	FALSE	canonical	NA	NA	NA	NA	2232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGCCTAGCTCACTAGT	NA	NA	NA	NA	NA	NA	NA	NA	90155478	90160326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_90155567_90156252_90156471_90156632_90156764_90158992
ENSMUSG00000052310.10_90156286_90160401_1	chr3	+	1725	3	ISM	ENSMUSG00000052310.10	ENST00000310483.10	1950	4	28	514	28	-514	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	90156285	90160401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90156471_90156632_90156764_90158992
ENSMUSG00000052310.10_90156318_90159058_1	chr3	+	219	2	ISM	ENSMUSG00000052310.10	ENST00000537590.5	1830	3	67	1861	60	-1857	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACGCTGGCTTACAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	90156317	90159058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90156471_90158992
ENSMUSG00000052310.10_90156401_90159141_1	chr3	+	219	2	ISM	ENSMUSG00000052310.10	ENST00000537590.5	1830	3	150	1778	143	-1774	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCACTGGCACGATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	90156400	90159141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90156471_90158992
ENSMUSG00000052310.10_90156631_90160567_1	chr3	+	1708	2	ISM	ENSMUSG00000052310.10	ENST00000310483.10	1950	4	373	348	373	-348	intron_retention	FALSE	canonical	NA	NA	NA	NA	1942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGCTGGGGCCTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	90156630	90160567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90156764_90158992
ENSMUSG00000052310.10_90159227_90160632_1	chr3	+	1089	2	ISM	ENSMUSG00000052310.10	ENST00000310483.10	1950	4	2969	283	2969	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGGGTGGGGAAGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	90159226	90160632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90160208_90160524
ENSMUSG00000052310.10_90159294_90160674_1	chr3	+	1064	2	ISM	ENSMUSG00000052310.10	ENST00000310483.10	1950	4	3036	241	3036	-241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAAGTAGGTACTGAC	NA	NA	NA	NA	NA	NA	NA	NA	90159293	90160674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90160208_90160524
ENSMUSG00000052310.10_90159529_90160919_1	chr3	+	1074	2	ISM	ENSMUSG00000052310.10	ENST00000310483.10	1950	4	3271	-4	3271	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATGGTATCTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	90159528	90160919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90160208_90160524
ENSMUSG00000052331.15_54691869_54801531_1	chr1	-	2559	20	ISM	ENSMUSG00000052331.15	ENST00000328737.6	3241	25	30160	-2	30160	2	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGAGGTTTTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	54801531	54691868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54692355_54692865_54692985_54694238_54694322_54694819_54694966_54696774_54696859_54698077_54698166_54700159_54700377_54701812_54701931_54703057_54703146_54706530_54706733_54720278_54720351_54762172_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472_54782588_54792048_54792128_54801419
ENSMUSG00000052331.15_54692044_54802947_1	chr1	-	2629	21	ISM	ENSMUSG00000052331.15	ENST00000328737.6	3241	25	28744	173	28744	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1092	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACGTCAGGTTTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	54802947	54692043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54692355_54692865_54692985_54694238_54694322_54694819_54694966_54696774_54696859_54698077_54698166_54700159_54700377_54701812_54701931_54703057_54703146_54706530_54706733_54720278_54720351_54762172_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472_54782588_54792048_54792128_54801419_54801633_54802803
ENSMUSG00000052331.15_54692217_54805971_1	chr1	-	2572	23	ISM	ENSMUSG00000052331.15	ENST00000328737.6	3241	25	25720	346	25720	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1010	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCTTATTTTGATATGA	NA	NA	NA	NA	NA	NA	NA	NA	54805971	54692216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54692355_54692865_54692985_54694238_54694322_54694819_54694966_54696774_54696859_54698077_54698166_54700159_54700377_54701812_54701931_54703057_54703146_54706530_54706733_54720278_54720351_54762172_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472_54782588_54792048_54792128_54801419_54801633_54802803_54802947_54805508_54805597_54805942
ENSMUSG00000052331.15_54692286_54806006_1	chr1	-	2538	23	ISM	ENSMUSG00000052331.15	ENST00000328737.6	3241	25	25685	415	25685	-415	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	952	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGGTGCCAACCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	54806006	54692285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54692355_54692865_54692985_54694238_54694322_54694819_54694966_54696774_54696859_54698077_54698166_54700159_54700377_54701812_54701931_54703057_54703146_54706530_54706733_54720278_54720351_54762172_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472_54782588_54792048_54792128_54801419_54801633_54802803_54802947_54805508_54805597_54805942
ENSMUSG00000052331.15_54692913_54817489_1	chr1	-	2603	23	ISM	ENSMUSG00000052331.15	ENST00000328737.6	3241	25	14202	1042	14202	-1042	internal_fragment	FALSE	canonical	NA	NA	NA	NA	988	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTGCAGACGTGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	54817489	54692912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54692985_54694238_54694322_54694819_54694966_54696774_54696859_54698077_54698166_54700159_54700377_54701812_54701931_54703057_54703146_54706530_54706733_54720278_54720351_54762172_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472_54782588_54792048_54792128_54801419_54801633_54802803_54802947_54805508_54805597_54805942_54806144_54817445
ENSMUSG00000052331.15_54694238_54831690_1	chr1	-	2638	23	ISM	ENSMUSG00000052331.15	ENST00000328737.6	3241	25	1	2367	1	-2367	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	891	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAATGTGTTTAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	54831690	54694237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54694322_54694819_54694966_54696774_54696859_54698077_54698166_54700159_54700377_54701812_54701931_54703057_54703146_54706530_54706733_54720278_54720351_54762172_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472_54782588_54792048_54792128_54801419_54801633_54802803_54802947_54805508_54805597_54805942_54806144_54817445_54817517_54831611
ENSMUSG00000052331.15_54756800_54766729_1	chr1	-	788	3	ISM	ENSMUSG00000052331.15	ENST00000409153.5	2401	17	198752	0	64962	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCACACAGAGCATAATT	NA	NA	NA	NA	NA	NA	NA	NA	54766729	54756799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54757359_54762136_54762285_54766648
ENSMUSG00000052331.15_54756921_54768998_1	chr1	-	773	4	ISM	ENSMUSG00000052331.15	ENST00000409153.5	2401	17	196483	121	62693	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCTCCCAGAAAAACCAT	NA	NA	NA	NA	NA	NA	NA	NA	54768998	54756920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54757359_54762136_54762285_54766648_54766730_54768892
ENSMUSG00000052331.15_54757085_54775415_1	chr1	-	804	7	ISM	ENSMUSG00000052331.15	ENST00000409153.5	2401	17	190066	285	56276	-285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGACTTTGTGTTTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	54775415	54757084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54757359_54762136_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388
ENSMUSG00000052331.15_54757197_54782500_1	chr1	-	776	8	ISM	ENSMUSG00000052331.15	ENST00000409153.5	2401	17	182981	397	49191	-397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTTTCAAACAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	54782500	54757196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54757359_54762136_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472
ENSMUSG00000052331.15_54757259_54782543_1	chr1	-	757	8	ISM	ENSMUSG00000052331.15	ENST00000409153.5	2401	17	182938	459	49148	-459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAAGTGGTTATTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	54782543	54757258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54757359_54762136_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472
ENSMUSG00000052331.15_54757314_54792098_1	chr1	-	796	9	ISM	ENSMUSG00000052331.15	ENST00000409153.5	2401	17	173383	514	39593	-514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCTTTGGAAGTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	54792098	54757313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54757359_54762136_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472_54782588_54792048
ENSMUSG00000052331.15_54792048_54817516_1	chr1	-	796	6	ISM	ENSMUSG00000052331.15	ENST00000328737.6	3241	25	14175	100177	14175	-35248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGCTTGCCTTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	54817516	54792047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54792128_54801419_54801633_54802803_54802947_54805508_54805597_54805942_54806144_54817445
ENSMUSG00000052331.15_54801420_54831690_1	chr1	-	795	6	ISM	ENSMUSG00000052331.15	ENST00000328737.6	3241	25	1	109549	1	-44620	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGACATTCAGTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	54831690	54801419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54801633_54802803_54802947_54805508_54805597_54805942_54806144_54817445_54817517_54831611
ENSMUSG00000052331.15_54801527_54965353_1	chr1	-	827	8	ISM	ENSMUSG00000052331.15	ENST00000409153.5	2401	17	128	44727	128	-44727	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCAACAACAGTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	54965353	54801526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54801633_54802803_54802947_54805508_54805597_54805942_54806144_54817445_54817517_54831611_54831691_54867770_54867855_54965298
ENSMUSG00000052331.15_54802839_54965513_1	chr1	-	846	7	ISM	ENSMUSG00000052331.15	ENST00000409153.5	2401	17	-32	46039	-32	-46039	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTCAAACATCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	54965513	54802838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54802947_54805508_54805597_54805942_54806144_54817445_54817517_54831611_54831691_54867770_54867855_54965298
ENSMUSG00000052337.16_71808416_71829851_1	chr6	+	595	5	ISM	ENSMUSG00000052337.16	ENSMUST00000064062.13	2728	15	101	22377	14	-22063	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTTAATTATTTATATT	NA	NA	NA	NA	NA	NA	NA	NA	71808415	71829851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713
ENSMUSG00000052337.16_71808443_71840167_1	chr6	+	955	9	ISM	ENSMUSG00000052337.16	ENSMUST00000114151.10	2518	13	49	12074	41	-11747	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTTGTGGTCCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	71808442	71840167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124
ENSMUSG00000052337.16_71821632_71833939_1	chr6	+	642	6	ISM	ENSMUSG00000052337.16	ENSMUST00000064062.13	2728	15	13317	18289	13230	-17975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTCTGCAGACTATTAC	NA	NA	NA	NA	NA	NA	NA	NA	71821631	71833939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895
ENSMUSG00000052337.16_71823391_71838090_1	chr6	+	653	6	ISM	ENSMUSG00000052337.16	ENSMUST00000064062.13	2728	15	15076	14138	14989	-13824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTACTCATGGACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	71823390	71838090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986
ENSMUSG00000052337.16_71823391_71845738_1	chr6	+	965	8	ISM	ENSMUSG00000052337.16	ENSMUST00000114151.10	2518	13	14997	6503	14989	-6176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTGGAGCACCACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	71823390	71845738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71823460_71828755_71828865_71829746_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563
ENSMUSG00000052337.16_71823391_71851914_1	chr6	+	1986	12	NIC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	14989	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTAGGAAGAGTTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	71823390	71851914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000052337.16_71828805_71839388_1	chr6	+	595	6	ISM	ENSMUSG00000052337.16	ENSMUST00000064062.13	2728	15	20490	12840	20403	-12526	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACCCCTCATATAACTG	NA	NA	NA	NA	NA	NA	NA	NA	71828804	71839388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328
ENSMUSG00000052337.16_71828809_71848472_1	chr6	+	954	8	ISM	ENSMUSG00000052337.16	ENSMUST00000114151.10	2518	13	20415	3769	20407	-3442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCACACTGATCATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	71828808	71848472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71828865_71829746_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410
ENSMUSG00000052337.16_71829774_71849844_1	chr6	+	1008	8	ISM	ENSMUSG00000052337.16	ENSMUST00000114151.10	2518	13	21380	2397	21372	-2070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTACTCTGGACATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	71829773	71849844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777
ENSMUSG00000052337.16_71833974_71851329_1	chr6	+	944	8	ISM	ENSMUSG00000052337.16	ENSMUST00000114151.10	2518	13	25580	912	25572	-585	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCACCAGCTCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	71833973	71851329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000052337.16_71838053_71851516_1	chr6	+	1006	7	ISM	ENSMUSG00000052337.16	ENSMUST00000114151.10	2518	13	29659	725	29651	-398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGAGACCCTAAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	71838052	71851516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000052337.16_71840123_71851740_1	chr6	+	1058	5	ISM	ENSMUSG00000052337.16	ENSMUST00000114151.10	2518	13	31729	501	31721	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGGAGCTGGCAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	71840122	71851740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000052337.16_71840170_71851695_1	chr6	+	959	5	NNC	ENSMUSG00000052337.16	novel	2518	13	NA	NA	31768	-219	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTAAATTGCTCTCATA	NA	NA	NA	NA	NA	NA	NA	NA	71840169	71851695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_71840255_71845563_71845788_71848417_71848543_71849777_71849908_71851300
ENSMUSG00000052337.16_71845564_71851740_1	chr6	+	926	4	ISM	ENSMUSG00000052337.16	ENSMUST00000101301.10	2299	15	37167	174	37162	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGGAGCTGGCAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	71845563	71851740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000052337.16_71849819_71852228_1	chr6	+	1017	2	ISM	ENSMUSG00000052337.16	ENSMUST00000166938.8	2413	13	41417	6	41417	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGAAAACTGAGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	71849818	71852228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71849908_71851300
ENSMUSG00000052369.9_97862081_97867646_1	chr15	+	975	8	FSM	ENSMUSG00000052369.9	ENSMUST00000229428.2	1455	8	-29	509	-29	88	multi-exon	FALSE	canonical	NA	NA	NA	NA	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAAGTAGAGGAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	97862080	97867646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_97862217_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
ENSMUSG00000052369.9_97862768_97867558_1	chr15	+	647	7	FSM	ENSMUSG00000052369.9	ENST00000550552.5	685	7	38	0	38	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGAGCCTGTTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	97862767	97867558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_97862912_97864127_97864192_97864817_97864978_97865067_97865152_97865957_97866008_97866489_97866544_97867467
ENSMUSG00000052369.9_97862768_97867646_1	chr15	+	735	7	FSM	ENSMUSG00000052369.9	ENST00000550552.5	685	7	38	-88	38	88	multi-exon	FALSE	canonical	NA	NA	NA	NA	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAAGTAGAGGAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	97862767	97867646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_97862912_97864127_97864192_97864817_97864978_97865067_97865152_97865957_97866008_97866489_97866544_97867467
ENSMUSG00000052369.9_97862768_97867737_1	chr15	+	826	7	FSM	ENSMUSG00000052369.9	ENST00000256686.10	1023	7	38	159	38	-159	multi-exon	FALSE	canonical	NA	NA	NA	NA	2554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTCTGTGCCTAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	97862767	97867737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_97862912_97864127_97864192_97864817_97864978_97865067_97865152_97865957_97866008_97866489_97866544_97867467
ENSMUSG00000052369.9_97864126_97867737_1	chr15	+	684	6	ISM	ENSMUSG00000052369.9	ENST00000256686.10	1023	7	1396	159	1396	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTCTGTGCCTAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	97864125	97867737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_97864192_97864817_97864978_97865067_97865152_97865957_97866008_97866489_97866544_97867467
ENSMUSG00000052369.9_97864126_97867897_1	chr15	+	901	6	ISM	ENSMUSG00000052369.9	ENSMUST00000229428.2	1455	8	2016	258	1396	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATGGGTGTGGTGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	97864125	97867897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
ENSMUSG00000052369.9_97864893_97867897_1	chr15	+	703	5	ISM	ENSMUSG00000052369.9	ENST00000256686.10	1023	7	2163	-1	2163	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATGGGTGTGGTGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	97864892	97867897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_97864978_97865067_97865152_97865957_97866008_97866489_97866544_97867467
ENSMUSG00000052396.8_98868291_98881843_1	chr7	-	1635	5	ISM	ENSMUSG00000052396.8	ENSMUST00000064231.8	1780	6	5983	0	5983	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTTTTCTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	98881843	98868290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98869167_98871459_98871660_98872199_98872375_98872707_98872913_98881664
ENSMUSG00000052397.9_7005670_7007141_1	chr17	-	1310	2	ISM	ENSMUSG00000052397.9	ENST00000337147.11	2391	11	16204	-309	16204	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGATTGCATGGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	7007141	7005669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_7006867_7007028
ENSMUSG00000052397.9_7005959_7008892_1	chr17	-	1326	4	ISM	ENSMUSG00000052397.9	ENST00000337147.11	2391	11	14453	-20	14453	20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATGACTGCAGTAATCACC	NA	NA	NA	NA	NA	NA	NA	NA	7008892	7005958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819
ENSMUSG00000052397.9_7006089_7009790_1	chr17	-	1322	5	ISM	ENSMUSG00000052397.9	ENST00000337147.11	2391	11	13555	110	13555	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAACATTAGTTTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	7009790	7006088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752
ENSMUSG00000052397.9_7006128_7009855_1	chr17	-	1348	5	ISM	ENSMUSG00000052397.9	ENST00000337147.11	2391	11	13490	149	13490	-149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAGGATAGTATTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	7009855	7006127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752
ENSMUSG00000052397.9_7006203_7009883_1	chr17	-	1301	5	ISM	ENSMUSG00000052397.9	ENST00000337147.11	2391	11	13462	224	13462	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTCTCCGATACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	7009883	7006202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752
ENSMUSG00000052397.9_7006405_7014759_1	chr17	-	1360	7	ISM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	35424	965	8586	-426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTCACGGGTGCCATA	NA	NA	NA	NA	NA	NA	NA	NA	7014759	7006404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662
ENSMUSG00000052397.9_7006511_7020423_1	chr17	-	1296	8	ISM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	29760	1071	2922	-532	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAGGTCAGATTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	7020423	7006510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381
ENSMUSG00000052397.9_7006711_7022055_1	chr17	-	1331	10	ISM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	28128	1271	1290	-732	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTAGAGGCCAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	7022055	7006710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009
ENSMUSG00000052397.9_7006770_7022101_1	chr17	-	1318	10	ISM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	28082	1330	1244	-791	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGACGCTGCGGCAAATC	NA	NA	NA	NA	NA	NA	NA	NA	7022101	7006769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009
ENSMUSG00000052397.9_7006826_7022155_1	chr17	-	1316	10	ISM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	28028	1386	1190	-847	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGACCCACAATGACATCA	NA	NA	NA	NA	NA	NA	NA	NA	7022155	7006825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009
ENSMUSG00000052397.9_7007029_7022284_1	chr17	-	1404	9	ISM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	27899	1589	1061	-1050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGGCAGGGACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	7022284	7007028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009
ENSMUSG00000052397.9_7007140_7023342_1	chr17	-	1389	10	ISM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	26841	1700	3	-1161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGGGCTACAGTGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	7023342	7007139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246
ENSMUSG00000052397.9_7007248_7026934_1	chr17	-	1338	11	ISM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	23249	1808	-3589	-1269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGGAGCTGCACCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	7026934	7007247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877
ENSMUSG00000052397.9_7008393_7050073_1	chr17	-	1344	11	ISM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	110	2953	110	-2414	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGACGAGGTAGAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	7050073	7008392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ENSMUSG00000052397.9_7008819_7050183_1	chr17	-	1393	10	ISM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	0	3379	0	-2840	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGATTGCCTGGGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	7050183	7008818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ENSMUSG00000052406.15_26843575_26850752_1	chr2	-	1605	6	ISM	ENSMUSG00000052406.15	ENSMUST00000064244.11	2281	8	3646	0	3646	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGTGTGGAAGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	26850752	26843574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614
ENSMUSG00000052406.15_26843844_26852559_1	chr2	-	1501	7	ISM	ENSMUSG00000052406.15	ENSMUST00000114020.10	2278	8	1839	266	1839	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTACCATGTGGAACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	26852559	26843843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394
ENSMUSG00000052406.15_26843991_26854098_1	chr2	-	1565	8	FSM	ENSMUSG00000052406.15	ENSMUST00000114020.10	2278	8	300	413	300	-413	multi-exon	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGACTTTCTTAAAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	26854098	26843990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394_26852736_26854063
ENSMUSG00000052406.15_26844338_26854290_1	chr2	-	1410	8	FSM	ENSMUSG00000052406.15	ENSMUST00000114020.10	2278	8	108	760	108	-760	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCGGGAACTTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	26854290	26844337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394_26852736_26854063
ENSMUSG00000052406.15_26844440_26854398_1	chr2	-	1416	8	FSM	ENSMUSG00000052406.15	ENSMUST00000114020.10	2278	8	0	862	0	-862	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGGCAGTTGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	26854398	26844439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394_26852736_26854063
ENSMUSG00000052414.10_102446697_102454893_1	chr15	-	282	3	ISM	ENSMUSG00000099083.8	ENSMUST00000169033.8	2165	11	78630	939	-17433	-939	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGCTGAAGCAGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	102454893	102446696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102446727_102449174_102449373_102454839
ENSMUSG00000052414.10_102462218_102466016_1	chr15	-	265	2	ISM	ENSMUSG00000052414.10	ENST00000591834.1	1430	12	67486	29653	67486	-29653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTCTCTCCCAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	102466016	102462217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102462357_102465890
ENSMUSG00000052414.10_102462308_102502124_1	chr15	-	283	4	ISM	ENSMUSG00000099083.8	ENSMUST00000169033.8	2165	11	31399	16550	31384	-16550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCAAGGAAGAAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	102502124	102462307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102462357_102465894_102466014_102471748_102471846_102502106
ENSMUSG00000052419.8_13868783_13871465_1	chr6	-	2076	3	FSM	ENSMUSG00000052419.8	ENSMUST00000139231.2	3177	3	52	1049	0	1016	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAGGAAAACAGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	13871465	13868782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_13870740_13871054_13871146_13871437
ENSMUSG00000052423.16_171097924_171099361_1	chr1	+	317	3	ISM	ENSMUSG00000052423.16	ENSMUST00000064272.10	1998	8	26	5107	11	-5107	5prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCCAACTGGCAGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	171097923	171099361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_171097985_171098772_171098944_171099276
ENSMUSG00000052428.11_167135947_167153589_1	chr1	+	954	6	ISM	ENSMUSG00000052428.11	ENSMUST00000195015.6	1573	7	0	4765	0	-4765	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTCCGTACCCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	167135946	167153589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167136503_167136874_167136953_167141675_167141736_167143811_167143859_167146830_167146899_167153444
ENSMUSG00000052428.11_167136067_167153589_1	chr1	+	834	6	ISM	ENSMUSG00000052428.11	ENSMUST00000195015.6	1573	7	120	4765	120	-4765	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTCCGTACCCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	167136066	167153589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167136503_167136874_167136953_167141675_167141736_167143811_167143859_167146830_167146899_167153444
ENSMUSG00000052428.11_167136305_167157908_2	chr1	+	769	7	FSM	ENSMUSG00000052428.11	ENSMUST00000195015.6	1573	7	358	446	358	-446	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGGTTTGTGTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	167136304	167157908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_167136503_167136874_167136953_167141675_167141736_167143811_167143859_167146830_167146899_167153444_167153590_167157735
ENSMUSG00000052428.11_167136874_167158169_1	chr1	+	833	6	ISM	ENSMUSG00000052428.11	ENSMUST00000195015.6	1573	7	927	185	927	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGTTTTTTAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	167136873	167158169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167136953_167141675_167141736_167143811_167143859_167146830_167146899_167153444_167153590_167157735
ENSMUSG00000052428.11_167141706_167158355_1	chr1	+	910	5	ISM	ENSMUSG00000052428.11	ENSMUST00000195015.6	1573	7	5759	-1	5759	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTCCTGTTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	167141705	167158355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_167141736_167143811_167143859_167146830_167146899_167153444_167153590_167157735
ENSMUSG00000052456.10_85744560_85751892_1	chr8	-	1231	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	85751892	85744559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_85744878_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750955_85751733
ENSMUSG00000052456.10_85744560_85751892_2	chr8	-	1232	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	85751892	85744559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_85744885_85745150_85745343_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750955_85751733
ENSMUSG00000052456.10_85744560_85751899_1	chr8	-	1239	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	11	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	731	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	85751899	85744559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750949_85751733
ENSMUSG00000052456.10_85744560_85751899_2	chr8	-	1238	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	85751899	85744559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746531_85750806_85750955_85751733
ENSMUSG00000052459.14_43906364_43928138_1	chr16	-	2449	9	ISM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	31421	356	31421	-356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGCTTAATCGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	43928138	43906363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087
ENSMUSG00000052459.14_43906414_43928194_1	chr16	-	2455	9	ISM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	31365	406	31365	-406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTTGACAGATATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	43928194	43906413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087
ENSMUSG00000052459.14_43906517_43929906_1	chr16	-	2457	10	ISM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	29653	509	29653	-509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGCTGTCAGTATACACT	NA	NA	NA	NA	NA	NA	NA	NA	43929906	43906516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857
ENSMUSG00000052459.14_43906805_43931903_1	chr16	-	2453	12	ISM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	27656	797	27656	-797	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATTCTGAAAACAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	43931903	43906804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860
ENSMUSG00000052459.14_43906848_43931970_1	chr16	-	2477	12	ISM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	27589	840	27589	-840	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTCACAAGGTACACG	NA	NA	NA	NA	NA	NA	NA	NA	43931970	43906847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860
ENSMUSG00000052459.14_43907055_43935041_1	chr16	-	2440	13	ISM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	24518	1047	24518	-1047	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTACTAGAAAACCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	43935041	43907054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976
ENSMUSG00000052459.14_43907253_43959386_1	chr16	-	2478	15	FSM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	173	1245	173	-1245	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGCACTTGGGAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	43959386	43907252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959310
ENSMUSG00000052459.14_43907321_43959559_1	chr16	-	2583	15	FSM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	0	1313	0	-1313	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATACTTCCATTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	43959559	43907320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959310
ENSMUSG00000052485.8_98822743_98829033_1	chr13	-	940	3	ISM	ENSMUSG00000052485.8	ENSMUST00000064347.8	1161	4	2309	0	2309	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTCCCATTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	98829033	98822742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98823025_98824855_98824992_98828511
ENSMUSG00000052488.8_73217125_73218195_1	chr8	-	304	2	ISM	ENSMUSG00000052488.8	ENSMUST00000212991.2	3646	18	10875	2651	10768	-2651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCACACCCTGGGATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	73218195	73217124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_73217161_73217927
ENSMUSG00000052504.8_63366351_63405381_1	chr16	-	924	6	ISM	ENSMUSG00000052504.8	ENST00000494014.1	3074	17	279102	0	279062	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTATTTTCCCCTATC	NA	NA	NA	NA	NA	NA	NA	NA	63405381	63366350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_63366600_63372949_63373009_63386941_63387136_63388750_63388901_63403750_63403961_63405319
ENSMUSG00000052504.8_63366468_63418635_1	chr16	-	1076	8	ISM	ENSMUSG00000052504.8	ENST00000494014.1	3074	17	265848	117	265808	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGCAGCAGCATCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	63418635	63366467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_63366600_63372949_63373009_63386941_63387136_63388750_63388901_63403750_63403961_63405319_63405382_63415920_63416107_63418552
ENSMUSG00000052504.8_63387093_63431341_1	chr16	-	981	9	ISM	ENSMUSG00000052504.8	ENSMUST00000232049.2	3011	17	253102	20625	253102	-20625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTGCCCAGCTGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	63431341	63387092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_63387136_63388750_63388901_63403750_63403961_63405319_63405382_63415920_63416107_63418552_63418679_63422623_63422692_63423893_63423997_63431308
ENSMUSG00000052504.8_63388836_63433229_1	chr16	-	997	9	ISM	ENSMUSG00000052504.8	ENSMUST00000232049.2	3011	17	251214	22368	251214	-22368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGATGTATGGAGTTACG	NA	NA	NA	NA	NA	NA	NA	NA	63433229	63388835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_63388901_63403750_63403961_63405319_63405382_63415920_63416107_63418552_63418679_63422623_63422692_63423893_63423997_63431308_63431469_63433212
ENSMUSG00000052504.8_63403878_63472662_1	chr16	-	998	9	ISM	ENSMUSG00000052504.8	ENSMUST00000232049.2	3011	17	211781	37410	211781	26797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTACGTCCACCGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	63472662	63403877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_63403961_63405319_63405382_63415920_63416107_63418552_63418679_63422623_63422692_63423893_63423997_63431308_63431469_63433212_63433338_63472577
ENSMUSG00000052504.8_63403944_63472720_1	chr16	-	990	9	ISM	ENSMUSG00000052504.8	ENSMUST00000232049.2	3011	17	211723	37476	211723	26731	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCATCCAGCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	63472720	63403943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_63403961_63405319_63405382_63415920_63416107_63418552_63418679_63422623_63422692_63423893_63423997_63431308_63431469_63433212_63433338_63472577
ENSMUSG00000052504.8_63416073_63473817_1	chr16	-	984	8	ISM	ENSMUSG00000052504.8	ENSMUST00000232049.2	3011	17	210626	49605	210626	14602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTCCTTCAAAAAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	63473817	63416072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_63416107_63418552_63418679_63422623_63422692_63423893_63423997_63431308_63431469_63433212_63433338_63472577_63472914_63473785
ENSMUSG00000052504.8_63418551_63473941_1	chr16	-	1076	7	ISM	ENSMUSG00000052504.8	ENSMUST00000232049.2	3011	17	210502	52083	210502	12124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGCATGCCAATAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	63473941	63418550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_63418679_63422623_63422692_63423893_63423997_63431308_63431469_63433212_63433338_63472577_63472914_63473785
ENSMUSG00000052504.8_63422664_63593362_1	chr16	-	998	7	ISM	ENSMUSG00000052504.8	ENSMUST00000232049.2	3011	17	91081	56196	91081	8011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCAGAGGAGAAGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	63593362	63422663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_63422692_63423893_63423997_63431308_63431469_63433212_63433338_63472577_63472914_63473785_63473942_63593272
ENSMUSG00000052504.8_63431386_63593565_1	chr16	-	993	5	ISM	ENSMUSG00000052504.8	ENSMUST00000232049.2	3011	17	90878	64918	90878	-711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAAATCCGAGCTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	63593565	63431385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_63431469_63433212_63433338_63472577_63472914_63473785_63473942_63593272
ENSMUSG00000052504.8_63433255_63593668_1	chr16	-	971	4	ISM	ENSMUSG00000052504.8	ENSMUST00000232654.2	2338	7	90852	2580	90775	-2580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAATTATCCTGGACTA	NA	NA	NA	NA	NA	NA	NA	NA	63593668	63433254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_63433338_63472577_63472914_63473785_63473942_63593272
ENSMUSG00000052504.8_63433305_63593727_1	chr16	-	980	4	ISM	ENSMUSG00000052504.8	ENSMUST00000232654.2	2338	7	90793	2630	90716	-2630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTTCCAGAAACAGTATC	NA	NA	NA	NA	NA	NA	NA	NA	63593727	63433304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_63433338_63472577_63472914_63473785_63473942_63593272
ENSMUSG00000052504.8_63472649_63593857_1	chr16	-	1006	3	ISM	ENSMUSG00000052504.8	ENSMUST00000232654.2	2338	7	90663	41974	90586	-41974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGGGTGTCAGAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	63593857	63472648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_63472914_63473785_63473942_63593272
ENSMUSG00000052504.8_63472837_63684443_1	chr16	-	1080	5	ISM	ENSMUSG00000052504.8	ENSMUST00000232654.2	2338	7	77	42162	0	-42162	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAGGAGGCCGGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	63684443	63472836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_63472914_63473785_63473942_63593272_63593934_63664465_63664531_63684322
ENSMUSG00000052512.18_49185703_49197644_1	chr7	+	428	3	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	63	59231	63	-58925	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAAGCGCTCCCCATCGG	NA	NA	NA	NA	NA	NA	NA	NA	49185702	49197644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49185781_49195547_49195840_49197586
ENSMUSG00000052512.18_49185762_49197713_1	chr7	+	438	3	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	122	59162	122	-58856	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGGACGCCCACGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	49185761	49197713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49185781_49195547_49195840_49197586
ENSMUSG00000052512.18_49195656_49197819_1	chr7	+	417	2	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	10016	59056	10016	-58750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTGCCACACTGGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	49195655	49197819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49195840_49197586
ENSMUSG00000052512.18_49195750_49197895_1	chr7	+	399	2	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	10110	58980	10110	-58674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGCCCCAAACCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	49195749	49197895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49195840_49197586
ENSMUSG00000052512.18_49198209_49201684_1	chr7	+	421	2	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	12569	55191	12569	-54885	internal_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGAGGGGGCTTGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	49198208	49201684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49198290_49201344
ENSMUSG00000052512.18_49201482_49206744_1	chr7	+	448	3	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	15842	50131	15842	-49825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAATTCCCCCTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	49201481	49206744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49201798_49203962_49204008_49206657
ENSMUSG00000052512.18_49201551_49206788_1	chr7	+	423	3	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	15911	50087	15911	-49781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAACAAGATTCAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	49201550	49206788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49201798_49203962_49204008_49206657
ENSMUSG00000052512.18_49201663_49208518_1	chr7	+	404	4	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	16023	48357	16023	-48051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAACGCAGACGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	49201662	49208518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49201798_49203962_49204008_49206657_49206819_49208455
ENSMUSG00000052512.18_49201775_49208644_1	chr7	+	418	4	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	16135	48231	16135	-47925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATTGAAGGAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	49201774	49208644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49201798_49203962_49204008_49206657_49206819_49208455
ENSMUSG00000052512.18_49206724_49214999_1	chr7	+	407	5	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	21084	41876	21084	-41570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGCTGACTACCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	49206723	49214999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49206819_49208455_49208645_49213818_49213872_49214832_49214857_49214953
ENSMUSG00000052512.18_49208538_49220970_1	chr7	+	432	6	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	22898	35905	22898	-35599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCCAGAGCTCAACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	49208537	49220970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49208645_49213818_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881
ENSMUSG00000052512.18_49213817_49222110_1	chr7	+	405	6	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	28177	34765	28177	-34459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTCTCCAGTATCAATA	NA	NA	NA	NA	NA	NA	NA	NA	49213816	49222110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881_49220994_49222055
ENSMUSG00000052512.18_49220940_49232592_1	chr7	+	414	4	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	35300	24283	35300	-23977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTACGAAATGAGCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	49220939	49232592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49220994_49222055_49222202_49225395_49225569_49232551
ENSMUSG00000052512.18_49222116_49233816_1	chr7	+	432	4	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	36476	23059	36476	-22753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCGAGAATGACCGACTG	NA	NA	NA	NA	NA	NA	NA	NA	49222115	49233816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49222202_49225395_49225569_49232551_49232706_49233797
ENSMUSG00000052512.18_49225496_49234916_1	chr7	+	415	4	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	39856	21959	39856	-21653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCGGCTCGGAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	49225495	49234916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49225569_49232551_49232706_49233797_49233961_49234891
ENSMUSG00000052512.18_49233793_49238912_1	chr7	+	380	4	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	48153	17963	48153	-17657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGACCCGGTGAGTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	49233792	49238912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49233961_49234891_49234993_49237454_49237551_49238897
ENSMUSG00000052512.18_49233838_49238988_1	chr7	+	411	4	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	48198	17887	48198	-17581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTCAGAGACCCCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	49233837	49238988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49233961_49234891_49234993_49237454_49237551_49238897
ENSMUSG00000052512.18_49233887_49239040_1	chr7	+	414	4	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	48247	17835	48247	-17529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACTATCTTGGTGACCG	NA	NA	NA	NA	NA	NA	NA	NA	49233886	49239040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49233961_49234891_49234993_49237454_49237551_49238897
ENSMUSG00000052512.18_49238898_49246939_1	chr7	+	442	3	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	53258	9936	53258	-9630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACAGCGAGAACAACGCT	NA	NA	NA	NA	NA	NA	NA	NA	49238897	49246939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49239067_49243964_49244201_49246902
ENSMUSG00000052512.18_49238962_49246984_1	chr7	+	423	3	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	53322	9891	53322	-9585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAACCTGCACCACGTC	NA	NA	NA	NA	NA	NA	NA	NA	49238961	49246984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49239067_49243964_49244201_49246902
ENSMUSG00000052512.18_49244066_49248087_1	chr7	+	425	4	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	58426	8788	58426	-8482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTCATGGAGACGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	49244065	49248087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49244201_49246902_49247058_49247249_49247322_49248024
ENSMUSG00000052512.18_49244131_49248138_1	chr7	+	411	4	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	58491	8737	58491	-8431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATCATCAACTGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	49244130	49248138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49244201_49246902_49247058_49247249_49247322_49248024
ENSMUSG00000052512.18_49244164_49248215_1	chr7	+	455	4	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	58524	8660	58524	-8354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGGTAGGTGGGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	49244163	49248215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49244201_49246902_49247058_49247249_49247322_49248024
ENSMUSG00000052512.18_49246964_49248561_1	chr7	+	413	4	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	61324	8314	61324	-8008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCACTGACCTGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	49246963	49248561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49247058_49247249_49247322_49248024_49248222_49248511
ENSMUSG00000052512.18_49247033_49248630_1	chr7	+	413	4	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	61393	8245	61393	-7939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAAGCATGCTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	49247032	49248630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49247058_49247249_49247322_49248024_49248222_49248511
ENSMUSG00000052512.18_49247280_49254223_1	chr7	+	409	4	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	61640	2652	61640	-2346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACCCATGGGCCGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	49247279	49254223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49247322_49248024_49248222_49248511_49248631_49254172
ENSMUSG00000052512.18_49248161_49256469_1	chr7	+	410	4	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	62521	406	62521	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGCCAACTACTCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	49248160	49256469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49248222_49248511_49248631_49254172_49254377_49256443
ENSMUSG00000052512.18_49254209_49256688_1	chr7	+	413	2	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	68569	187	68569	119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGAACCCCTCCTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	49254208	49256688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49254377_49256443
ENSMUSG00000052512.18_49254299_49256811_1	chr7	+	446	2	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	68659	64	68659	-64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCGTGACCTCCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	49254298	49256811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49254377_49256443
ENSMUSG00000052534.16_167982411_168018890_1	chr1	-	4230	4	ISM	ENSMUSG00000052534.16	ENST00000560641.5	1920	8	145504	-3101	145504	-1300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTCCTTTTCCGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	168018890	167982410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_167986394_168011098_168011189_168012524_168012638_168018846
ENSMUSG00000052534.16_167982602_168023405_1	chr1	-	4244	5	ISM	ENSMUSG00000052534.16	ENST00000560641.5	1920	8	140989	-2910	140989	-1491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	168023405	167982601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_167986394_168011098_168011189_168012524_168012638_168018846_168019007_168023316
ENSMUSG00000052534.16_167983485_168037164_1	chr1	-	3844	7	ISM	ENSMUSG00000052534.16	ENST00000560641.5	1920	8	127230	-2027	127230	2027	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTCAACTTTCTAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	168037164	167983484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_167986394_168011098_168011189_168012524_168012638_168018846_168019007_168023316_168023453_168030915_168031107_168036919
ENSMUSG00000052534.16_167985511_168164353_1	chr1	-	1880	8	FSM	ENSMUSG00000052534.16	ENST00000560641.5	1920	8	41	-1	41	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACATCCAACCATTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	168164353	167985510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_167986394_168011098_168011189_168012524_168012638_168018846_168019007_168023316_168023453_168030915_168031107_168036919_168037165_168164291
ENSMUSG00000052539.16_103923785_103958220_1	chr3	-	1692	12	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	169138	-5	169138	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGGTTACCACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	103958220	103923784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103924009_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108
ENSMUSG00000052539.16_103924815_103958363_1	chr3	-	1613	11	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	168995	1025	168995	-1025	internal_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAAATAGCTGAACACT	NA	NA	NA	NA	NA	NA	NA	NA	103958363	103924814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108
ENSMUSG00000052539.16_103927612_103958591_1	chr3	-	1682	10	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	168767	3822	168767	-3822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACGGCAGGATTCACGT	NA	NA	NA	NA	NA	NA	NA	NA	103958591	103927611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108
ENSMUSG00000052539.16_103927654_103958655_1	chr3	-	1704	10	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	168703	3864	168703	-3864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTTCATCCTGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	103958655	103927653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108
ENSMUSG00000052539.16_103927720_103958690_1	chr3	-	1673	10	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	168668	3930	168668	-3930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGCTGGAGAGAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	103958690	103927719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108
ENSMUSG00000052539.16_103928254_103961676_1	chr3	-	1697	10	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	165682	4464	165682	-4464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAACACAGACACCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	103961676	103928253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657
ENSMUSG00000052539.16_103928314_103961724_1	chr3	-	1685	10	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	165634	4524	165634	-4524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCACCTTGCACAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	103961724	103928313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657
ENSMUSG00000052539.16_103928365_103961774_1	chr3	-	1684	10	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	165584	4575	165584	-4575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTGGGAGAGATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	103961774	103928364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657
ENSMUSG00000052539.16_103935214_103968990_1	chr3	-	1723	10	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	158368	11424	158368	-11424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGGGCAGTCCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	103968990	103935213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963971_103968947
ENSMUSG00000052539.16_103941385_103992550_1	chr3	-	1696	11	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	134808	17595	134808	-17595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAAATGAAGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	103992550	103941384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963971_103968947_103969006_103987452_103987533_103992523
ENSMUSG00000052539.16_103941445_103992593_1	chr3	-	1679	11	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	134765	17655	134765	-17655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGGGCAGAGCTTCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	103992593	103941444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963971_103968947_103969006_103987452_103987533_103992523
ENSMUSG00000052539.16_103941490_103992649_1	chr3	-	1690	11	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	134709	17700	134709	-17700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAAAGCCATCAAGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	103992649	103941489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963971_103968947_103969006_103987452_103987533_103992523
ENSMUSG00000052539.16_103945934_103996802_1	chr3	-	1674	11	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	130556	22144	130556	-22144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGTATTAGACTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	103996802	103945933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963971_103968947_103969006_103987452_103987533_103992523_103992702_103996774
ENSMUSG00000052539.16_103945986_103996856_1	chr3	-	1676	11	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	130502	22196	130502	-22196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGATGAATTGATGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	103996856	103945985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963971_103968947_103969006_103987452_103987533_103992523_103992702_103996774
ENSMUSG00000052539.16_103946019_103996924_1	chr3	-	1711	11	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	130434	22229	130434	-22229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGCAGCTGAAAAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	103996924	103946018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963971_103968947_103969006_103987452_103987533_103992523_103992702_103996774
ENSMUSG00000052539.16_103954172_104002500_1	chr3	-	1772	10	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	124858	30382	124858	-30382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAGTTGTGAACTATT	NA	NA	NA	NA	NA	NA	NA	NA	104002500	103954171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963971_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380
ENSMUSG00000052539.16_103954280_104013080_1	chr3	-	1698	11	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	114278	30490	114278	-30490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCCCCAGCCTATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	104013080	103954279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963971_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046
ENSMUSG00000052539.16_103958226_104127093_1	chr3	-	1716	10	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	265	34436	265	-34436	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATCATCAAAGAAATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	104127093	103958225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103958715_103961657_103961847_103963828_103963971_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ENSMUSG00000052539.16_103958372_104127205_1	chr3	-	1682	10	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	153	34582	153	-34582	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGCAGCTCACAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	104127205	103958371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103958715_103961657_103961847_103963828_103963971_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ENSMUSG00000052539.16_103958424_104127254_1	chr3	-	1679	10	ISM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	104	34634	104	-34634	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGTCTCAATGGTCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	104127254	103958423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_103958715_103961657_103961847_103963828_103963971_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ENSMUSG00000052560.16_90373141_90393795_1	chr15	-	571	5	ISM	ENSMUSG00000052560.16	ENSMUST00000064391.12	3366	20	169840	1455	169796	-1455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCTTTGATCCTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	90393795	90373140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_90373379_90381267_90381342_90384087_90384146_90385613_90385717_90393697
ENSMUSG00000052560.16_90527654_90563478_1	chr15	-	459	4	FSM	ENSMUSG00000052560.16	ENSMUST00000014777.9	697	4	113	125	113	-125	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCTAGGCAATTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	90563478	90527653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_90527917_90532780_90532828_90533445_90533487_90563370
ENSMUSG00000052560.16_90527720_90563579_1	chr15	-	494	4	FSM	ENSMUSG00000052560.16	ENSMUST00000014777.9	697	4	12	191	12	-191	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTACTCTGTTTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	90563579	90527719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_90527917_90532780_90532828_90533445_90533487_90563370
ENSMUSG00000052566.9_85717271_85727833_1	chr8	+	1750	18	ISM	ENSMUSG00000052566.9	ENSMUST00000064495.8	2580	22	25	2145	0	1498	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGAGTTGGAGCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	85717270	85727833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783
ENSMUSG00000052566.9_85717847_85728057_1	chr8	+	1781	18	ISM	ENSMUSG00000052566.9	ENSMUST00000064495.8	2580	22	601	1921	576	1722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCTGGTGTCTGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	85717846	85728057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949
ENSMUSG00000052566.9_85719812_85729199_1	chr8	+	1685	17	ISM	ENSMUSG00000052566.9	ENSMUST00000064495.8	2580	22	2566	779	2541	-773	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCACAGCTCTGGGAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	85719811	85729199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132
ENSMUSG00000052566.9_85719987_85729367_1	chr8	+	1695	17	ISM	ENSMUSG00000052566.9	ENSMUST00000064495.8	2580	22	2741	611	2716	-605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCCTGGTACAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	85719986	85729367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315
ENSMUSG00000052566.9_85720203_85729535_1	chr8	+	1659	17	ISM	ENSMUSG00000052566.9	ENSMUST00000064495.8	2580	22	2957	443	2932	-437	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGCCCAGTCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	85720202	85729535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ENSMUSG00000052566.9_85720626_85729661_1	chr8	+	1707	16	ISM	ENSMUSG00000052566.9	ENSMUST00000064495.8	2580	22	3380	317	3355	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGGAGTCTTCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	85720625	85729661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ENSMUSG00000052566.9_85721319_85729972_1	chr8	+	1815	14	ISM	ENSMUSG00000052566.9	ENSMUST00000064495.8	2580	22	4073	6	4048	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTATGAGCGTTTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	85721318	85729972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ENSMUSG00000052572.20_91935698_92064838_1	chr7	+	431	4	FSM	ENSMUSG00000052572.20	ENST00000530800.5	431	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAATGTTCCTTTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	91935697	92064838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_91935814_92024761_92024939_92036122_92036199_92064776
ENSMUSG00000052572.20_91935698_92064838_2	chr7	+	422	4	NNC	ENSMUSG00000052572.20	novel	431	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAATGTTCCTTTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	91935697	92064838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_91935814_92024761_92024939_92036122_92036199_92064785
ENSMUSG00000052572.20_91935698_92064838_3	chr7	+	426	4	NNC	ENSMUSG00000052572.20	novel	431	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAATGTTCCTTTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	91935697	92064838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_91935809_92024761_92024939_92036122_92036199_92064776
ENSMUSG00000052584.11_76770254_76793932_1	chr14	-	495	2	FSM	ENSMUSG00000052584.11	ENSMUST00000228055.2	705	2	210	0	180	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCATGTGCGAGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	76793932	76770253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_76770687_76793870
ENSMUSG00000052593.17_21374225_21382160_1	chr12	-	1837	6	ISM	ENSMUSG00000052593.17	ENSMUST00000101551.10	4469	20	41434	715	41380	-413	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACCCACGTGACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	21382160	21374224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076
ENSMUSG00000052593.17_21374278_21382211_1	chr12	-	1835	6	ISM	ENSMUSG00000052593.17	ENSMUST00000101551.10	4469	20	41383	768	41329	-466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCCATCGGGGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	21382211	21374277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076
ENSMUSG00000052593.17_21374473_21384046_1	chr12	-	1836	8	ISM	ENSMUSG00000052593.17	ENSMUST00000101551.10	4469	20	39548	963	39494	-661	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTCTAGGACACGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	21384046	21374472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954
ENSMUSG00000052593.17_21374533_21384122_1	chr12	-	1852	8	ISM	ENSMUSG00000052593.17	ENSMUST00000101551.10	4469	20	39472	1023	39418	-721	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACCCACATGGTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	21384122	21374532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954
ENSMUSG00000052593.17_21374804_21390547_1	chr12	-	1841	10	ISM	ENSMUSG00000052593.17	ENSMUST00000101551.10	4469	20	33047	1294	32993	-992	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCTGTCTTGGCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	21390547	21374803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472
ENSMUSG00000052593.17_21375527_21401601_1	chr12	-	1842	16	ISM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	22032	2009	21939	-1715	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATGATGCCGCCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	21401601	21375526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543
ENSMUSG00000052593.17_21382080_21423556_1	chr12	-	1903	14	ISM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	77	8562	-16	-8268	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGAGTATTTTCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	21423556	21382079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ENSMUSG00000052616.11_105173847_105223498_1	chr8	-	1795	14	ISM	ENSMUSG00000052616.11	ENST00000558713.6	2191	17	10977	65	10977	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGAAGGGCTGTAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	105223498	105173846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105173963_105178426_105178493_105179256_105179407_105195359_105195453_105195742_105195805_105199317_105199665_105208804_105208960_105210908_105211035_105211988_105212121_105215118_105215272_105221501_105221625_105221718_105221835_105221933_105221995_105223403
ENSMUSG00000052616.11_105173938_105224626_1	chr8	-	1769	15	ISM	ENSMUSG00000052616.11	ENST00000558713.6	2191	17	9849	156	9849	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	893	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACCAAAGAAGAAGTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	105224626	105173937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105173963_105178426_105178493_105179256_105179407_105195359_105195453_105195742_105195805_105199317_105199665_105208804_105208960_105210908_105211035_105211988_105212121_105215118_105215272_105221501_105221625_105221718_105221835_105221933_105221995_105223403_105223536_105224598
ENSMUSG00000052616.11_105179342_105225187_1	chr8	-	1757	14	ISM	ENSMUSG00000052616.11	ENST00000558713.6	2191	17	9288	5560	9288	-5560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGTGTGTTCACCATAA	NA	NA	NA	NA	NA	NA	NA	NA	105225187	105179341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105179407_105195359_105195453_105195742_105195805_105199317_105199665_105208804_105208960_105210908_105211035_105211988_105212121_105215118_105215272_105221501_105221625_105221718_105221835_105221933_105221995_105223403_105223536_105224598_105224728_105225124
ENSMUSG00000052616.11_105195358_105234438_1	chr8	-	1759	14	ISM	ENSMUSG00000052616.11	ENST00000558713.6	2191	17	37	21576	37	-21576	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTTTTTAAGATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	105234438	105195357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_105195453_105195742_105195805_105199317_105199665_105208804_105208960_105210908_105211035_105211988_105212121_105215118_105215272_105221501_105221625_105221718_105221835_105221933_105221995_105223403_105223536_105224598_105224728_105225124_105225236_105234421
ENSMUSG00000052681.9_117651342_117681836_1	chr10	-	839	5	NNC	ENSMUSG00000052681.9	novel	846	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2998	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATTTTAGCATAATAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	117681836	117651341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_117651678_117653248_117653366_117654370_117654515_117656366_117656508_117681735
ENSMUSG00000052681.9_117651342_117681836_2	chr10	-	847	5	FSM	ENSMUSG00000052681.9	ENST00000543393.5	846	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATTTTAGCATAATAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	117681836	117651341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117681735
ENSMUSG00000052681.9_117651565_117681753_1	chr10	-	633	6	FSM	ENSMUSG00000052681.9	ENST00000539091.5	959	6	83	243	83	-38	multi-exon	FALSE	canonical	NA	NA	NA	NA	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCACATTCTAATCACT	NA	NA	NA	NA	NA	NA	NA	NA	117681753	117651564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117660498_117660580_117681724
ENSMUSG00000052681.9_117651565_117681795_1	chr10	-	646	7	FSM	ENSMUSG00000052681.9	ENST00000543697.5	725	7	41	38	41	-38	multi-exon	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCACATTCTAATCACT	NA	NA	NA	NA	NA	NA	NA	NA	117681795	117651564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_117651686_117653248_117653366_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
ENSMUSG00000052681.9_117654371_117681940_1	chr10	-	708	6	ISM	ENSMUSG00000052681.9	ENST00000393436.9	2073	8	10	3923	0	-2844	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGCATGTGTACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	117681940	117654370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681724
ENSMUSG00000052681.9_117654480_117681790_1	chr10	-	438	6	ISM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	150	4704	46	-2953	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGATGAAAGAGTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	117681790	117654479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
ENSMUSG00000052681.9_117656458_117681940_1	chr10	-	462	5	ISM	ENSMUSG00000052681.9	ENST00000543697.5	725	7	-104	4931	0	-4931	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTCTGGTTTACTCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	117681940	117656457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
ENSMUSG00000052688.13_131626256_131640137_1	chr1	+	894	2	ISM	ENSMUSG00000052688.13	ENSMUST00000064664.10	1672	5	9811	352	9752	-352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGGGCTTTCCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	131626255	131640137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_131626370_131639357
ENSMUSG00000052688.13_131626265_131640670_1	chr1	+	1544	3	ISM	ENSMUSG00000052688.13	ENSMUST00000064679.9	4498	6	9832	2507	9761	181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAGGTGGACAGAACGA	NA	NA	NA	NA	NA	NA	NA	NA	131626264	131640670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_131626370_131633333_131633460_131639357
ENSMUSG00000052688.13_131626348_131640719_1	chr1	+	1510	3	ISM	ENSMUSG00000052688.13	ENSMUST00000064679.9	4498	6	9915	2458	9844	230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCATGCCTTCCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	131626347	131640719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_131626370_131633333_131633460_131639357
ENSMUSG00000052707.9_122770610_122779027_1	chr7	+	1339	7	ISM	ENSMUSG00000052707.9	ENSMUST00000094053.7	8183	24	47206	15492	47206	-15488	internal_fragment	TRUE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGCCTCAGATTTCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	122770609	122779027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939
ENSMUSG00000052712.18_29487762_29521864_1	chr17	+	2809	9	NNC	ENSMUSG00000052712.18	novel	2812	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTACCTTCTTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	29487761	29521864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515536_29515664_29517615_29517740_29520329
ENSMUSG00000052712.18_29487762_29521864_2	chr17	+	2803	9	NNC	ENSMUSG00000052712.18	novel	2812	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTACCTTCTTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	29487761	29521864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517624_29517740_29520329
ENSMUSG00000052712.18_29487762_29521864_3	chr17	+	2805	9	NNC	ENSMUSG00000052712.18	novel	2812	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTACCTTCTTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	29487761	29521864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_29487977_29496830_29496922_29501033_29501235_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUSG00000052712.18_29487762_29521864_4	chr17	+	2804	9	NNC	ENSMUSG00000052712.18	novel	2812	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1058	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTACCTTCTTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	29487761	29521864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515656_29517615_29517740_29520329
ENSMUSG00000052713.10_55024907_55028363_1	chr18	-	314	3	ISM	ENSMUSG00000052713.10	ENST00000613878.4	3197	8	93324	3774	93324	-3774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGCGGCACCTGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	55028363	55024906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_55024976_55027522_55027696_55028291
ENSMUSG00000052713.10_55027611_55028529_1	chr18	-	323	2	ISM	ENSMUSG00000052713.10	ENST00000613878.4	3197	8	93158	6478	93158	-6478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGCATCAACACAAAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	55028529	55027610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_55027696_55028291
ENSMUSG00000052713.10_55028398_55033301_1	chr18	-	329	2	ISM	ENSMUSG00000052713.10	ENST00000613878.4	3197	8	88386	7265	88386	-7265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCCTACATACAATACTT	NA	NA	NA	NA	NA	NA	NA	NA	55033301	55028397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_55028710_55033284
ENSMUSG00000052713.10_55028570_55079689_1	chr18	-	293	3	ISM	ENSMUSG00000052713.10	ENST00000613878.4	3197	8	41998	7437	41998	-7437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCCCCGTGTCATTAA	NA	NA	NA	NA	NA	NA	NA	NA	55079689	55028569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_55028710_55033284_55033373_55079624
ENSMUSG00000052713.10_55028617_55079756_1	chr18	-	313	3	ISM	ENSMUSG00000052713.10	ENST00000613878.4	3197	8	41931	7484	41931	-7484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGGACAGTCCAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	55079756	55028616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_55028710_55033284_55033373_55079624
ENSMUSG00000052713.10_55028678_55079797_1	chr18	-	293	3	ISM	ENSMUSG00000052713.10	ENST00000613878.4	3197	8	41890	7545	41890	-7545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCAGCCCAAGTACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	55079797	55028677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_55028710_55033284_55033373_55079624
ENSMUSG00000052713.10_55079670_55120757_1	chr18	-	286	2	ISM	ENSMUSG00000052713.10	ENST00000613878.4	3197	8	930	58537	930	-58537	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGTCAATTTGGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	55120757	55079669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_55079881_55120682
ENSMUSG00000052713.10_55079721_55120812_1	chr18	-	290	2	ISM	ENSMUSG00000052713.10	ENST00000613878.4	3197	8	875	58588	875	-58588	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGGAGTAGTGACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	55120812	55079720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_55079881_55120682
ENSMUSG00000052713.10_55079762_55120875_1	chr18	-	312	2	ISM	ENSMUSG00000052713.10	ENST00000613878.4	3197	8	812	58629	812	-58629	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTCGGACTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	55120875	55079761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_55079881_55120682
ENSMUSG00000052727.7_99562153_99563816_1	chr13	-	407	2	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	89232	4199	20312	-4199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAATTTTTGCTGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	99563816	99562152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99562470_99563726
ENSMUSG00000052727.7_99562318_99565773_1	chr13	-	445	3	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	87275	4364	18355	-4364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGACCGCAGCCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	99565773	99562317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99562470_99563726_99563966_99565719
ENSMUSG00000052727.7_99562439_99565869_1	chr13	-	420	3	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	87179	4485	18259	-4485	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGGGAGTGGTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	99565869	99562438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99562470_99563726_99563966_99565719
ENSMUSG00000052727.7_99563870_99566039_1	chr13	-	416	2	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	87009	5916	18089	-5916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTCGATGTTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	99566039	99563869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99563966_99565719
ENSMUSG00000052727.7_99563919_99566114_1	chr13	-	442	2	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	86934	5965	18014	-5965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGTGTATTTGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	99566114	99563918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99563966_99565719
ENSMUSG00000052727.7_99571827_99578179_1	chr13	-	421	2	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	74869	13873	5949	4315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCACTTGGACCGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	99578179	99571826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99572210_99578141
ENSMUSG00000052727.7_99571874_99578242_1	chr13	-	437	2	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	74806	13920	5886	4268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATCAACGGAGGATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	99578242	99571873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99572210_99578141
ENSMUSG00000052727.7_99576994_99580789_1	chr13	-	1357	2	ISM	ENSMUSG00000052727.7	ENSMUST00000223725.2	2669	3	3339	852	3339	-852	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCCTTTGGTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	99580789	99576993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99578283_99580721
ENSMUSG00000052727.7_99577169_99583834_1	chr13	-	1348	3	FSM	ENSMUSG00000052727.7	ENSMUST00000223725.2	2669	3	294	1027	294	-1027	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAATACCAGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	99583834	99577168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_99578283_99580721_99580805_99583683
ENSMUSG00000052727.7_99577225_99583910_1	chr13	-	1368	3	FSM	ENSMUSG00000052727.7	ENSMUST00000223725.2	2669	3	218	1083	218	-1083	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGAAAGAGCTATGATTT	NA	NA	NA	NA	NA	NA	NA	NA	99583910	99577224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_99578283_99580721_99580805_99583683
ENSMUSG00000052727.7_99578158_99652871_1	chr13	-	370	4	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	177	20204	177	-2016	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACAGATCAAGAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	99652871	99578157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_99578283_99580721_99580805_99644615_99644718_99652811
ENSMUSG00000052738.15_73233223_73240836_1	chr6	+	198	3	ISM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	7858	13058	7858	-13058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTTGCTGCTGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	73233222	73240836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_73233258_73237457_73237575_73240790
ENSMUSG00000052738.15_73237493_73240905_1	chr6	+	197	2	ISM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	12128	12989	12128	-12989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTATTCCGCAGCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	73237492	73240905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_73237575_73240790
ENSMUSG00000052738.15_73237531_73240974_1	chr6	+	228	2	ISM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	12166	12920	12166	-12920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGGCCAAACTGCCCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	73237530	73240974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_73237575_73240790
ENSMUSG00000052738.15_73240908_73246343_1	chr6	+	200	3	ISM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	15543	7551	15543	-7551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACCCAAGTCGGATTGG	NA	NA	NA	NA	NA	NA	NA	NA	73240907	73246343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_73241004_73241212_73241271_73246297
ENSMUSG00000052738.15_73246342_73252208_1	chr6	+	217	3	ISM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	20977	1686	20977	-1686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCATTGCTGGTATAACT	NA	NA	NA	NA	NA	NA	NA	NA	73246341	73252208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_73246382_73247953_73248106_73252183
ENSMUSG00000052738.15_73252222_73253723_1	chr6	+	210	2	ISM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	26857	171	26857	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATCTAGACGTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	73252221	73253723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_73252373_73253664
ENSMUSG00000052738.15_73252282_73253766_1	chr6	+	193	2	ISM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	26917	128	26917	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGACACTGGTTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	73252281	73253766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_73252373_73253664
ENSMUSG00000052748.15_151278851_151286589_1	chr1	-	404	5	ISM	ENSMUSG00000052748.15	ENSMUST00000064771.12	3688	20	17617	35401	17617	-35401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTAGATCGTATGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	151286589	151278850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521
ENSMUSG00000052751.17_48571844_48574550_1	chr6	+	1518	2	FSM	ENSMUSG00000052751.17	ENST00000479668.5	3104	2	123	1463	123	-1463	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGCCCGGACTGCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	48571843	48574550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_48571930_48573118
ENSMUSG00000052752.16_24727536_24732313_1	chr17	-	2283	14	ISM	ENSMUSG00000052752.16	ENSMUST00000088464.12	2504	20	5869	-288	5869	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCATGTTCAGATGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	24732313	24727535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166
ENSMUSG00000052752.16_24727707_24732906_1	chr17	-	2183	15	ISM	ENSMUSG00000052752.16	ENSMUST00000088464.12	2504	20	5276	-117	5276	117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCTGAGCTCCATTACC	NA	NA	NA	NA	NA	NA	NA	NA	24732906	24727706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872
ENSMUSG00000052752.16_24727824_24733730_1	chr17	-	2203	17	ISM	ENSMUSG00000052752.16	ENSMUST00000088464.12	2504	20	4452	0	4452	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	24733730	24727823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686
ENSMUSG00000052752.16_24727824_24735573_1	chr17	-	2248	17	ISM	ENSMUSG00000052752.16	ENSMUST00000070777.13	2384	19	2609	0	2609	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	24735573	24727823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24735478
ENSMUSG00000052752.16_24727951_24735573_2	chr17	-	2244	18	ISM	ENSMUSG00000052752.16	ENSMUST00000088464.12	2504	20	2609	127	2609	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCACCGCCGCTCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	24735573	24727950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478
ENSMUSG00000052752.16_24728063_24737773_1	chr17	-	2190	19	NIC	ENSMUSG00000052752.16	novel	2504	20	NA	NA	409	-239	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGGTCTCACTATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	24737773	24728062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715
ENSMUSG00000052752.16_24728071_24738182_1	chr17	-	2257	20	FSM	ENSMUSG00000052752.16	ENSMUST00000088464.12	2504	20	0	247	0	-247	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGAGACAGGGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	24738182	24728070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104
ENSMUSG00000052752.16_24728207_24746774_1	chr17	-	2194	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176652.8	3003	21	138	671	46	-383	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCCTATACTTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	24746774	24728206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ENSMUSG00000052752.16_24728270_24746820_1	chr17	-	2177	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176652.8	3003	21	92	734	0	-446	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCCATTGGAATGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	24746820	24728269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ENSMUSG00000052752.16_24728316_24746885_1	chr17	-	2196	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176652.8	3003	21	27	780	27	-492	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCAGGCCAGGCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	24746885	24728315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ENSMUSG00000052752.16_24732033_24738220_1	chr17	-	603	7	NIC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	-38	-4209	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGTGCGCTGCCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	24738220	24732032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_-_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24735478_24735571_24737715_24737774_24738104
ENSMUSG00000052763.8_47897531_47908597_1	chr6	+	1704	5	FSM	ENSMUSG00000052763.8	ENSMUST00000009411.9	2801	5	121	976	121	-976	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTGCTCCTGCTTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	47897530	47908597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_47897684_47903440_47903831_47903953_47904081_47905983_47906065_47907644
ENSMUSG00000052763.8_47897600_47908666_1	chr6	+	1704	5	FSM	ENSMUSG00000052763.8	ENSMUST00000009411.9	2801	5	190	907	190	-907	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCCCAGCCTTTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	47897599	47908666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_47897684_47903440_47903831_47903953_47904081_47905983_47906065_47907644
ENSMUSG00000052763.8_47903668_47908990_1	chr6	+	1717	4	ISM	ENSMUSG00000052763.8	ENSMUST00000009411.9	2801	5	6258	583	6258	-583	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAGCTCAAAACTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	47903667	47908990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_47903831_47903953_47904081_47905983_47906065_47907644
ENSMUSG00000052763.8_47903745_47909040_1	chr6	+	1690	4	ISM	ENSMUSG00000052763.8	ENSMUST00000009411.9	2801	5	6335	533	6335	-533	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAACATGGGAACTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	47903744	47909040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_47903831_47903953_47904081_47905983_47906065_47907644
ENSMUSG00000052763.8_47904011_47909212_1	chr6	+	1719	3	ISM	ENSMUSG00000052763.8	ENSMUST00000009411.9	2801	5	6601	361	6601	-361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAAGAGGAAGCCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	47904010	47909212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_47904081_47905983_47906065_47907644
ENSMUSG00000052798.14_117586529_117601934_1	chr10	-	1438	10	ISM	ENSMUSG00000052798.14	ENSMUST00000167943.8	3098	28	26669	0	26669	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATGAGAGTTTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	117601934	117586528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815
ENSMUSG00000052798.14_117586765_117606426_1	chr10	-	1467	13	ISM	ENSMUSG00000052798.14	ENSMUST00000167943.8	3098	28	22177	236	22177	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCATTCTCTGATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	117606426	117586764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280
ENSMUSG00000052798.14_117586765_117606428_1	chr10	-	1205	11	ISM	ENSMUSG00000052798.14	ENST00000378905.6	2621	26	22193	-1	22175	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1009	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCATTCTCTGATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	117606428	117586764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117600221_117600257_117601811_117601935_117602238_117602309_117606092_117606142_117606280
ENSMUSG00000052798.14_117587222_117607298_1	chr10	-	1158	11	ISM	ENSMUSG00000052798.14	ENST00000378905.6	2621	26	21323	456	21305	-456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	964	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTGACCACTTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	117607298	117587221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117600221_117600257_117601811_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238
ENSMUSG00000052798.14_117587338_117609006_1	chr10	-	1089	12	ISM	ENSMUSG00000052798.14	ENST00000378905.6	2621	26	19615	572	19597	-572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCCCATGCTGTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	117609006	117587337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117600221_117600257_117601811_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959
ENSMUSG00000052798.14_117593190_117609273_1	chr10	-	1139	12	ISM	ENSMUSG00000052798.14	ENST00000378905.6	2621	26	19348	6424	19330	-6424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGGATGTCAGAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	117609273	117593189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117600221_117600257_117601811_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180
ENSMUSG00000052798.14_117593190_117610428_1	chr10	-	1205	13	ISM	ENSMUSG00000052798.14	ENST00000378905.6	2621	26	18193	6424	18175	-6424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	990	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGGATGTCAGAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	117610428	117593189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117600221_117600257_117601811_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360
ENSMUSG00000052798.14_117593801_117610475_1	chr10	-	1156	12	ISM	ENSMUSG00000052798.14	ENST00000378905.6	2621	26	18146	7035	18128	-7035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTAACTGTGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	117610475	117593800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117593927_117595076_117595238_117597149_117597253_117600221_117600257_117601811_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360
ENSMUSG00000052798.14_117593891_117612167_1	chr10	-	1117	13	ISM	ENSMUSG00000052798.14	ENST00000378905.6	2621	26	16454	7125	16436	-7125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATTCGGCTCCACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	117612167	117593890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117593927_117595076_117595238_117597149_117597253_117600221_117600257_117601811_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115
ENSMUSG00000052798.14_117595076_117613124_1	chr10	-	1200	13	ISM	ENSMUSG00000052798.14	ENST00000378905.6	2621	26	15497	8310	15479	-8310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGCCTGAAAAGAAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	117613124	117595075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117595238_117597149_117597253_117600221_117600257_117601811_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033
ENSMUSG00000052798.14_117595188_117613533_1	chr10	-	1122	14	ISM	ENSMUSG00000052798.14	ENST00000378905.6	2621	26	15088	8422	15070	-8422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCCATCGCAGAGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	117613533	117595187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117595238_117597149_117597253_117600221_117600257_117601811_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497
ENSMUSG00000052798.14_117597150_117616634_1	chr10	-	1160	14	ISM	ENSMUSG00000052798.14	ENST00000378905.6	2621	26	11987	10384	11969	-10384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTCCTCTTACAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	117616634	117597149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117597253_117600221_117600257_117601811_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582
ENSMUSG00000052798.14_117597973_117617312_1	chr10	-	1360	16	ISM	ENSMUSG00000052798.14	ENSMUST00000167943.8	3098	28	11291	11444	11291	-11207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCACCATGACCTGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	117617312	117597972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225
ENSMUSG00000052798.14_117606281_117621044_1	chr10	-	1154	12	ISM	ENSMUSG00000052798.14	ENST00000378905.6	2621	26	7577	19515	7559	-19515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGGACGCACGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	117621044	117606280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899
ENSMUSG00000052798.14_117606281_117626465_1	chr10	-	1454	15	ISM	ENSMUSG00000052798.14	ENST00000378905.6	2621	26	2156	19515	2138	-19515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1597	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGGACGCACGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	117626465	117606280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371
ENSMUSG00000052798.14_117606382_117623740_1	chr10	-	1096	13	ISM	ENSMUSG00000052798.14	ENST00000378905.6	2621	26	4881	19616	4863	-19616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGGTGATGGTGGATAG	NA	NA	NA	NA	NA	NA	NA	NA	117623740	117606381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697
ENSMUSG00000052798.14_117608959_117625970_1	chr10	-	1160	12	ISM	ENSMUSG00000052798.14	ENST00000378905.6	2621	26	2651	22193	2633	-22193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGATAATGAAATACTCGC	NA	NA	NA	NA	NA	NA	NA	NA	117625970	117608958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878
ENSMUSG00000052798.14_117609180_117626465_1	chr10	-	1172	12	ISM	ENSMUSG00000052798.14	ENST00000378905.6	2621	26	2156	22414	2138	-22414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGGGTTCTAGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	117626465	117609179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371
ENSMUSG00000052798.14_117610360_117628556_1	chr10	-	1127	12	ISM	ENSMUSG00000052798.14	ENST00000378905.6	2621	26	65	23594	47	-23594	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCCCGGACCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	117628556	117610359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ENSMUSG00000052833.10_16061730_16070667_1	chr7	-	244	3	ISM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	51043	755	51043	-755	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTCTCCGGATCATTT	NA	NA	NA	NA	NA	NA	NA	NA	16070667	16061729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_16061855_16064537_16064608_16070618
ENSMUSG00000052833.10_16061774_16070725_1	chr7	-	258	3	ISM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	50985	799	50985	-799	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCCCAGTGAGCTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	16070725	16061773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_16061855_16064537_16064608_16070618
ENSMUSG00000052833.10_16061833_16092982_1	chr7	-	259	4	ISM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	28728	858	28728	-858	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACAACAACTTCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	16092982	16061832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960
ENSMUSG00000052833.10_16102541_16112341_1	chr7	-	262	3	ISM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	9369	41566	9369	-41566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCGACCAGATCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	16112341	16102540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_16102577_16104211_16104386_16112289
ENSMUSG00000052833.10_16104241_16121589_1	chr7	-	281	3	ISM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	121	43266	121	-43266	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTCCTTCTTCACGAAG	NA	NA	NA	NA	NA	NA	NA	NA	16121589	16104240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_16104386_16112289_16112402_16121565
ENSMUSG00000052906.8_34109614_34131995_1	chr8	-	2803	8	NNC	ENSMUSG00000052906.8	novel	2808	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAGTCAGCTTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	34131995	34109613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123651_34125316_34125388_34128507_34128631_34131877
ENSMUSG00000052911.10_108364223_108365546_1	chr9	+	968	5	ISM	ENSMUSG00000052911.10	ENSMUST00000065014.10	5629	33	7167	2183	7167	-2183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAACTTCAACCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	108364222	108365546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403
ENSMUSG00000052915.15_98686626_98694771_1	chr11	+	1038	7	ISM	ENSMUSG00000052915.15	ENST00000579565.5	1399	10	-32	1566	0	-1566	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTAGACGAGAAGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	98686625	98694771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98686805_98687334_98687431_98689965_98690190_98690825_98691209_98693093_98693142_98693607_98693673_98694728
ENSMUSG00000052915.15_98686743_98695156_1	chr11	+	975	8	ISM	ENSMUSG00000052915.15	ENST00000579565.5	1399	10	85	1181	85	-1181	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTACAGCGACTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	98686742	98695156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98686805_98687334_98687431_98689965_98690190_98690825_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127
ENSMUSG00000052915.15_98687335_98695252_1	chr11	+	1009	7	ISM	ENSMUSG00000052915.15	ENST00000579565.5	1399	10	677	1085	677	-1085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGGTATCTATCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	98687334	98695252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98687431_98689965_98690190_98690825_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127
ENSMUSG00000052915.15_98690056_98696218_1	chr11	+	947	8	ISM	ENSMUSG00000052915.15	ENST00000579565.5	1399	10	3398	119	576	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAAGAAGCACACACCTC	NA	NA	NA	NA	NA	NA	NA	NA	98690055	98696218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98690190_98690825_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ENSMUSG00000052915.15_98690098_98696277_1	chr11	+	964	8	ISM	ENSMUSG00000052915.15	ENST00000579565.5	1399	10	3440	60	618	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAGATAGTTGTAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	98690097	98696277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98690190_98690825_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ENSMUSG00000052915.15_98690166_98696311_1	chr11	+	930	8	ISM	ENSMUSG00000052915.15	ENST00000579565.5	1399	10	3508	26	686	-26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCAGAGACCTGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	98690165	98696311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98690190_98690825_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ENSMUSG00000052915.15_98690824_98696433_1	chr11	+	1030	7	ISM	ENSMUSG00000052915.15	ENST00000579565.5	1399	10	4166	-96	1344	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGCTCTTGCGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	98690823	98696433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ENSMUSG00000052926.17_85683239_85691822_1	chr8	-	1668	5	ISM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	818	0	818	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACTATGTTATCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	85691822	85683238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759
ENSMUSG00000052926.17_85683433_85692234_1	chr8	-	1661	7	ISM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	406	194	406	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	85692234	85683432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199
ENSMUSG00000052926.17_85683544_85692590_1	chr8	-	1689	8	FSM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	50	305	50	-305	multi-exon	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCACCTTGTGGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	85692590	85683543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ENSMUSG00000052926.17_85684296_85692590_1	chr8	-	1038	7	FSM	ENSMUSG00000052926.17	ENSMUST00000128972.9	1141	7	103	0	50	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	85692590	85684295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ENSMUSG00000052926.17_85691818_85692827_1	chr8	-	568	4	ISM	ENSMUSG00000052926.17	ENSMUST00000128972.9	1141	7	-134	7522	-134	-7522	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATACAGCTGCGGGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	85692827	85691817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85691848_85691945_85692073_85692199_85692272_85692488
ENSMUSG00000052926.17_85692236_85694351_1	chr8	-	524	3	ISM	ENSMUSG00000052926.17	ENSMUST00000109736.9	2981	10	2018	8997	-1658	-7940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGCTTGGCAGATCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	85694351	85692235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85692272_85692488_85692917_85694291
ENSMUSG00000052926.17_85692581_85694474_1	chr8	-	519	2	ISM	ENSMUSG00000052926.17	ENSMUST00000109736.9	2981	10	1895	9342	1595	-8285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTGTCGTCTGAGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	85694474	85692580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85692917_85694291
ENSMUSG00000052926.17_85692858_85696210_1	chr8	-	561	3	ISM	ENSMUSG00000052926.17	ENSMUST00000147812.8	1532	11	-141	8562	-141	-8562	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCATTACAAACCACGCC	NA	NA	NA	NA	NA	NA	NA	NA	85696210	85692857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_85692917_85694291_85694498_85695914
ENSMUSG00000052934.15_122279058_122281031_1	chr8	-	315	2	ISM	ENSMUSG00000052934.15	ENSMUST00000059018.14	4358	9	24514	2879	24514	-2879	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCCGAGTCCAGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	122281031	122279057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_122279185_122280843
ENSMUSG00000052962.4_71791269_71795676_1	chr6	-	2172	3	ISM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	5118	1288	5118	-1288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAATCCATTGATGATA	NA	NA	NA	NA	NA	NA	NA	NA	71795676	71791268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_71793272_71794588_71794734_71795652
ENSMUSG00000052962.4_71791489_71800757_1	chr6	-	2176	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	37	1508	37	-1508	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGACTTTGTCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	71800757	71791488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
ENSMUSG00000052997.16_33840113_33845726_1	chr7	-	1119	4	ISM	ENSMUSG00000052997.16	ENST00000439527.6	2496	17	21671	-8	21671	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGCCCTAGTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	33845726	33840112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629
ENSMUSG00000052997.16_33840300_33847093_1	chr7	-	1081	5	ISM	ENSMUSG00000052997.16	ENST00000439527.6	2496	17	20304	179	20304	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTAAAACAATGTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	33847093	33840299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944
ENSMUSG00000052997.16_33840508_33854069_1	chr7	-	1248	8	ISM	ENSMUSG00000052997.16	ENST00000439527.6	2496	17	13328	387	13328	-387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGCTATCATTTCCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	33854069	33840507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908
ENSMUSG00000052997.16_33840815_33857471_1	chr7	-	1231	11	ISM	ENSMUSG00000052997.16	ENST00000439527.6	2496	17	9926	694	9926	-694	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGGCCCGCAAGCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	33857471	33840814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403
ENSMUSG00000052997.16_33842233_33858321_1	chr7	-	1163	11	ISM	ENSMUSG00000052997.16	ENST00000439527.6	2496	17	9076	2112	9076	-2112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1019	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTGAAGATGCTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	33858321	33842232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242
ENSMUSG00000052997.16_33843915_33861062_1	chr7	-	1240	11	ISM	ENSMUSG00000052997.16	ENST00000439527.6	2496	17	6335	3794	6335	-3794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACCTGTTAGTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	33861062	33843914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961
ENSMUSG00000052997.16_33845630_33862643_1	chr7	-	1199	11	ISM	ENSMUSG00000052997.16	ENST00000439527.6	2496	17	4754	5509	4754	-5509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCACCCTCGCCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	33862643	33845629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578
ENSMUSG00000052997.16_33846945_33864910_1	chr7	-	1257	12	ISM	ENSMUSG00000052997.16	ENST00000439527.6	2496	17	2487	6824	2487	-6824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGCAAGGACTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	33864910	33846944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826
ENSMUSG00000052997.16_33847047_33867833_1	chr7	-	1191	13	ISM	ENSMUSG00000052997.16	ENSMUST00000102746.11	2579	17	167	6934	167	-6926	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATCCTCCCAACACCAA	NA	NA	NA	NA	NA	NA	NA	NA	33867833	33847046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ENSMUSG00000052997.16_33850251_33868000_1	chr7	-	1266	12	ISM	ENSMUSG00000052997.16	ENSMUST00000102746.11	2579	17	0	10138	0	-10130	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGATTTTATCTGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	33868000	33850250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ENSMUSG00000052997.16_33850469_33867326_1	chr7	-	996	11	ISM	ENSMUSG00000052997.16	ENST00000439527.6	2496	17	71	10348	71	-10348	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGCACATTTTCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	33867326	33850468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867269
ENSMUSG00000053024.15_132442239_132449026_1	chr1	-	1790	9	ISM	ENSMUSG00000053024.15	ENST00000638378.1	3928	24	21812	0	21597	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGGTCCCCGGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	132449026	132442238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132442533_132442917_132443376_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876
ENSMUSG00000053024.15_132442239_132450192_1	chr1	-	1613	10	ISM	ENSMUSG00000053024.15	ENST00000640428.1	3561	23	20431	0	20431	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGGTCCCCGGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	132450192	132442238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132442533_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070
ENSMUSG00000053024.15_132442436_132449619_1	chr1	-	1754	10	ISM	ENSMUSG00000053024.15	ENST00000638378.1	3928	24	21219	197	21004	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTCTGCTGCAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	132449619	132442435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132442533_132442917_132443376_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458
ENSMUSG00000053024.15_132442476_132451153_1	chr1	-	1609	12	ISM	ENSMUSG00000053024.15	ENST00000640428.1	3561	23	19470	237	19470	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGCAGGCGACGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	132451153	132442475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132442533_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095
ENSMUSG00000053024.15_132442932_132450095_1	chr1	-	1666	10	ISM	ENSMUSG00000053024.15	ENST00000638378.1	3928	24	20743	693	20528	-693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGGCCACAAGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	132450095	132442931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132443376_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070
ENSMUSG00000053024.15_132443057_132450726_1	chr1	-	1691	11	ISM	ENSMUSG00000053024.15	ENST00000638378.1	3928	24	20112	818	19897	-818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGCAGTGACTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	132450726	132443056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132443376_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672
ENSMUSG00000053024.15_132443117_132450767_1	chr1	-	1672	11	ISM	ENSMUSG00000053024.15	ENST00000638378.1	3928	24	20071	878	19856	-878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTCTATTCTGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	132450767	132443116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132443376_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672
ENSMUSG00000053024.15_132443227_132451131_1	chr1	-	1679	12	ISM	ENSMUSG00000053024.15	ENST00000638378.1	3928	24	19707	988	19492	-988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACAGCGGCTGGCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	132451131	132443226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132443376_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095
ENSMUSG00000053024.15_132443274_132451188_1	chr1	-	1689	12	ISM	ENSMUSG00000053024.15	ENST00000638378.1	3928	24	19650	1035	19435	-1035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCAACGCTGCCCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	132451188	132443273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132443376_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095
ENSMUSG00000053024.15_132443758_132451481_1	chr1	-	1774	12	ISM	ENSMUSG00000053024.15	ENST00000640428.1	3561	23	19142	1519	19142	-1519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGCCCCTCCCTTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	132451481	132443757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330
ENSMUSG00000053024.15_132443895_132453080_1	chr1	-	1673	13	ISM	ENSMUSG00000053024.15	ENST00000640428.1	3561	23	17543	1656	17543	-1656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTCCACCTCACCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	132453080	132443894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044
ENSMUSG00000053024.15_132444739_132454089_1	chr1	-	1722	13	ISM	ENSMUSG00000053024.15	ENST00000640428.1	3561	23	16534	2500	16534	-2500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTACCCCAACACCAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	132454089	132444738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025
ENSMUSG00000053024.15_132446035_132454201_1	chr1	-	1747	12	ISM	ENSMUSG00000053024.15	ENST00000640428.1	3561	23	16422	3796	16422	-3796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCGTCCCCTGGGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	132454201	132446034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025
ENSMUSG00000053024.15_132446400_132455532_1	chr1	-	1734	12	ISM	ENSMUSG00000053024.15	ENST00000640428.1	3561	23	15091	4161	15091	-4161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGCTGTGGGGCCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	132455532	132446399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432
ENSMUSG00000053024.15_132446523_132455832_1	chr1	-	1630	13	ISM	ENSMUSG00000053024.15	ENST00000640428.1	3561	23	14791	4284	14791	-4284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCGTCTACAGCAACGAT	NA	NA	NA	NA	NA	NA	NA	NA	132455832	132446522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432_132455533_132455813
ENSMUSG00000053024.15_132446560_132455910_1	chr1	-	1671	13	ISM	ENSMUSG00000053024.15	ENST00000640428.1	3561	23	14713	4321	14713	-4321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGACGGCCCGGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	132455910	132446559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432_132455533_132455813
ENSMUSG00000053024.15_132446608_132455964_1	chr1	-	1677	13	ISM	ENSMUSG00000053024.15	ENST00000640428.1	3561	23	14659	4369	14659	-4369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGCTTCGGCTACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	132455964	132446607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432_132455533_132455813
ENSMUSG00000053024.15_132448966_132456690_1	chr1	-	1688	13	ISM	ENSMUSG00000053024.15	ENST00000640428.1	3561	23	13933	6727	13933	-6727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTATGAGTTTCGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	132456690	132448965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432_132455533_132455813_132456024_132456349_132456446_132456647
ENSMUSG00000053024.15_132449459_132456829_1	chr1	-	1766	12	ISM	ENSMUSG00000053024.15	ENST00000640428.1	3561	23	13794	7220	13794	-7220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATGAGGCACCATGT	NA	NA	NA	NA	NA	NA	NA	NA	132456829	132449458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432_132455533_132455813_132456024_132456349_132456446_132456647
ENSMUSG00000053024.15_132449568_132456956_1	chr1	-	1683	13	ISM	ENSMUSG00000053024.15	ENST00000640428.1	3561	23	13667	7329	13667	-7329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTCAGCTTAGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	132456956	132449567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432_132455533_132455813_132456024_132456349_132456446_132456647_132456824_132456924
ENSMUSG00000053024.15_132450720_132461497_1	chr1	-	1681	12	ISM	ENSMUSG00000053024.15	ENST00000640428.1	3561	23	9126	8481	9126	-8481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGACTTTGATAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	132461497	132450719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432_132455533_132455813_132456024_132456349_132456446_132456647_132456824_132456924_132457070_132461394
ENSMUSG00000053024.15_132450826_132470816_1	chr1	-	1683	13	ISM	ENSMUSG00000053024.15	ENST00000638378.1	3928	24	22	8587	22	-8587	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCGAGTGCTGACATCAA	NA	NA	NA	NA	NA	NA	NA	NA	132470816	132450825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432_132455533_132455813_132456024_132456349_132456446_132456647_132456824_132456924_132457070_132461394_132461556_132470766
ENSMUSG00000053024.15_132451169_132470603_1	chr1	-	1680	12	ISM	ENSMUSG00000053024.15	ENST00000640428.1	3561	23	20	8930	20	-8930	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCAAATATACCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	132470603	132451168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432_132455533_132455813_132456024_132456349_132456446_132456647_132456824_132456924_132457070_132461394_132461556_132470460
ENSMUSG00000053046.17_141503583_141538227_1	chr7	+	612	4	ISM	ENSMUSG00000053046.17	ENSMUST00000078200.12	2363	19	95	14515	0	-14515	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATCATCTCTGCACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	141503582	141538227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141503917_141535273_141535369_141536717_141536804_141538130
ENSMUSG00000053046.17_141503820_141539471_1	chr7	+	610	6	ISM	ENSMUSG00000053046.17	ENST00000531197.5	3170	19	345	17510	0	-13271	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGTGTGGAGCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	141503819	141539471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141503917_141535273_141535369_141536717_141536804_141538130_141538272_141538585_141538703_141539397
ENSMUSG00000053046.17_141535274_141557013_1	chr7	+	3125	18	FSM	ENSMUSG00000053046.17	ENST00000382179.5	3121	18	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTGGTTGTTTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	141535273	141557013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_141535369_141536717_141536804_141538130_141538272_141538585_141538703_141539397_141539516_141539622_141539770_141541158_141541191_141541487_141541653_141541850_141541949_141542022_141542174_141545976_141546038_141546848_141547057_141547451_141547501_141550625_141550750_141552114_141552296_141552369_141552460_141554578_141554627_141555799
ENSMUSG00000053046.17_141538171_141541564_1	chr7	+	592	6	ISM	ENSMUSG00000053046.17	ENST00000382179.5	3121	18	2894	15448	2894	-11178	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGACCCTGATGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	141538170	141541564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141538272_141538585_141538703_141539397_141539516_141539622_141539770_141541158_141541191_141541487
ENSMUSG00000053046.17_141538217_141541621_1	chr7	+	603	6	ISM	ENSMUSG00000053046.17	ENST00000382179.5	3121	18	2940	15391	2940	-11121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCTGCTGCAGGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	141538216	141541621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141538272_141538585_141538703_141539397_141539516_141539622_141539770_141541158_141541191_141541487
ENSMUSG00000053046.17_141538586_141541948_1	chr7	+	677	6	ISM	ENSMUSG00000053046.17	ENST00000382179.5	3121	18	3309	15064	3309	-10794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAAAGCTTCCACCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	141538585	141541948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141538703_141539397_141539516_141539622_141539770_141541158_141541191_141541487_141541653_141541850
ENSMUSG00000053046.17_141539447_141542103_1	chr7	+	592	6	ISM	ENSMUSG00000053046.17	ENST00000382179.5	3121	18	4170	14909	4170	-10639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTGACAGATGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	141539446	141542103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141539516_141539622_141539770_141541158_141541191_141541487_141541653_141541850_141541949_141542022
ENSMUSG00000053046.17_141541541_141557462_1	chr7	+	2373	11	ISM	ENSMUSG00000053046.17	ENST00000308219.13	4118	19	38066	514	-5379	350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGAGTGCTCTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	141541540	141557462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141541653_141541850_141541949_141542022_141542174_141545976_141546038_141546848_141547057_141547451_141547501_141550625_141550750_141552114_141552296_141552369_141552460_141554578_141554627_141556211
ENSMUSG00000053046.17_141542021_141552147_1	chr7	+	628	6	ISM	ENSMUSG00000053046.17	ENST00000382179.5	3121	18	6744	4865	-4899	-595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCTTCAGGGCTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	141542020	141552147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141542174_141545976_141546038_141546848_141547057_141547451_141547501_141550625_141550750_141552114
ENSMUSG00000053046.17_141542094_141552177_1	chr7	+	585	6	ISM	ENSMUSG00000053046.17	ENST00000382179.5	3121	18	6817	4835	-4826	-565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGCCCAGCAGTGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	141542093	141552177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141542174_141545976_141546038_141546848_141547057_141547451_141547501_141550625_141550750_141552114
ENSMUSG00000053046.17_141542142_141552233_1	chr7	+	593	6	ISM	ENSMUSG00000053046.17	ENST00000382179.5	3121	18	6865	4779	-4778	-509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGCGGAGAGGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	141542141	141552233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141542174_141545976_141546038_141546848_141547057_141547451_141547501_141550625_141550750_141552114
ENSMUSG00000053046.17_141546947_141556258_1	chr7	+	744	8	FSM	ENSMUSG00000053046.17	ENST00000544817.5	1625	8	27	854	27	289	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGTGGACACTGG	NA	NA	NA	NA	NA	NA	NA	NA	141546946	141556258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_141547057_141547451_141547501_141550625_141550750_141552114_141552296_141552369_141552460_141552656_141552752_141554578_141554627_141556211
ENSMUSG00000053046.17_141552398_141556666_1	chr7	+	612	3	ISM	ENSMUSG00000053046.17	ENST00000531197.5	3170	19	48923	315	5478	-315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCATGGGCTGAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	141552397	141556666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141552460_141552656_141552752_141556211
ENSMUSG00000053046.17_141552655_141556842_1	chr7	+	776	3	ISM	ENSMUSG00000053046.17	ENST00000544817.5	1625	8	5735	270	5735	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTTCTGTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	141552654	141556842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_141552752_141554578_141554627_141556211
ENSMUSG00000053062.17_84571126_84621483_1	chr16	+	2919	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	115	-1333	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACTGTATACAGCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	84571125	84621483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613275_84618147_84618191_84619674
ENSMUSG00000053062.17_84571274_84621663_1	chr16	+	2951	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	0	-1153	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAGATGTTGATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84571273	84621663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613275_84618147_84618191_84619674
ENSMUSG00000053062.17_84571274_84621714_1	chr16	+	3002	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	0	-1102	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAACTATGTGAGCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	84571273	84621714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613275_84618147_84618191_84619674
ENSMUSG00000053062.17_84598458_84621877_1	chr16	+	2997	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	8012	-939	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGATTAAAGTTCACGCT	NA	NA	NA	NA	NA	NA	NA	NA	84598457	84621877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613275_84618147_84618191_84619674
ENSMUSG00000053062.17_84609785_84622137_1	chr16	+	2929	5	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	19339	-679	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAGGGAGTGCCAAATC	NA	NA	NA	NA	NA	NA	NA	NA	84609784	84622137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_84609987_84612056_84612157_84613153_84613275_84618147_84618191_84619674
ENSMUSG00000053062.17_84609839_84622186_1	chr16	+	2924	5	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	19393	-630	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTGCGGTGACCGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	84609838	84622186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_84609987_84612056_84612157_84613153_84613275_84618147_84618191_84619674
ENSMUSG00000053062.17_84609894_84622239_1	chr16	+	2922	5	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	19448	-577	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCCACCAGATCCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	84609893	84622239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_84609987_84612056_84612157_84613153_84613275_84618147_84618191_84619674
ENSMUSG00000053062.17_84612141_84622421_1	chr16	+	2927	4	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	21695	-395	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTTATTCTGCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	84612140	84622421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_84612157_84613153_84613275_84618147_84618191_84619674
ENSMUSG00000053062.17_84613240_84622537_1	chr16	+	2941	3	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	22794	-279	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTCCCATTTTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	84613239	84622537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_84613275_84618147_84618191_84619674
ENSMUSG00000053093.17_55208141_55216437_1	chr14	-	2178	13	ISM	ENSMUSG00000053093.17	ENST00000355349.4	5926	37	13906	-4	13906	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCTCTAGACTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	55216437	55208140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55208268_55208833_55208969_55209081_55209178_55210144_55210421_55210527_55210654_55210758_55210963_55211214_55211524_55212098_55212224_55212368_55212535_55212690_55212875_55213335_55213533_55216039_55216159_55216323
ENSMUSG00000053093.17_55210592_55220747_1	chr14	-	2169	13	ISM	ENSMUSG00000053093.17	ENST00000355349.4	5926	37	9596	2447	9596	-2368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAGGAGGCAGTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	55220747	55210591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55210654_55210758_55210963_55211214_55211524_55212098_55212224_55212368_55212535_55212690_55212875_55213335_55213533_55216039_55216159_55216323_55216451_55216629_55217020_55217777_55217869_55219622_55219769_55220698
ENSMUSG00000053093.17_55210874_55221066_1	chr14	-	2187	13	ISM	ENSMUSG00000053093.17	ENST00000355349.4	5926	37	9277	2729	9277	-2650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCGGAGCTGGAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	55221066	55210873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55210963_55211214_55211524_55212098_55212224_55212368_55212535_55212690_55212875_55213335_55213533_55216039_55216159_55216323_55216451_55216629_55217020_55217777_55217869_55219622_55219769_55220698_55220876_55220999
ENSMUSG00000053093.17_55211439_55222147_1	chr14	-	2190	13	ISM	ENSMUSG00000053093.17	ENST00000355349.4	5926	37	8196	3294	8196	-3215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGAAGGATGAGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	55222147	55211438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55211524_55212098_55212224_55212368_55212535_55212690_55212875_55213335_55213533_55216039_55216159_55216323_55216451_55216629_55217020_55217777_55217869_55219622_55219769_55220698_55220876_55220999_55221243_55222007
ENSMUSG00000053093.17_55216655_55225853_1	chr14	-	2215	13	ISM	ENSMUSG00000053093.17	ENST00000355349.4	5926	37	4490	8510	4490	-8431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAGCAGATCATCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	55225853	55216654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55217020_55217777_55217869_55219622_55219769_55220698_55220876_55220999_55221243_55222007_55222264_55222510_55222648_55222917_55223042_55223181_55223300_55223916_55224005_55224325_55224394_55224677_55224988_55225761
ENSMUSG00000053093.17_55216747_55225905_1	chr14	-	2175	13	ISM	ENSMUSG00000053093.17	ENST00000355349.4	5926	37	4438	8602	4438	-8523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGAGCAGATCGACAACCT	NA	NA	NA	NA	NA	NA	NA	NA	55225905	55216746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55217020_55217777_55217869_55219622_55219769_55220698_55220876_55220999_55221243_55222007_55222264_55222510_55222648_55222917_55223042_55223181_55223300_55223916_55224005_55224325_55224394_55224677_55224988_55225761
ENSMUSG00000053093.17_55216850_55226302_1	chr14	-	2170	14	ISM	ENSMUSG00000053093.17	ENST00000355349.4	5926	37	4041	8705	4041	-8626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGTTCCAGAAGATGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	55226302	55216849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55217020_55217777_55217869_55219622_55219769_55220698_55220876_55220999_55221243_55222007_55222264_55222510_55222648_55222917_55223042_55223181_55223300_55223916_55224005_55224325_55224394_55224677_55224988_55225761_55225933_55226231
ENSMUSG00000053093.17_55221056_55228431_1	chr14	-	2193	16	ISM	ENSMUSG00000053093.17	ENST00000355349.4	5926	37	1912	12911	1912	-12832	internal_fragment	TRUE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGAGCTGACGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	55228431	55221055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55221243_55222007_55222264_55222510_55222648_55222917_55223042_55223181_55223300_55223916_55224005_55224325_55224394_55224677_55224988_55225761_55225933_55226231_55226382_55226500_55226620_55226711_55226851_55227434_55227539_55227761_55227861_55228198_55228263_55228372
ENSMUSG00000053094.16_130251176_130272306_1	chr5	+	3369	7	FSM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	0	201	0	-201	multi-exon	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCAGTGCATAGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	130251175	130272306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ENSMUSG00000053094.16_130258289_130272507_1	chr5	+	3333	6	ISM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	7113	0	7113	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTGCCGTTTTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	130258288	130272507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ENSMUSG00000053110.14_7933540_7938442_1	chr9	-	1341	3	ISM	ENSMUSG00000053110.14	ENST00000526343.5	1574	7	65875	-615	65875	615	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTGGAGCAATTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	7938442	7933539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_7934734_7936515_7936629_7938408
ENSMUSG00000053110.14_7933575_7938512_1	chr9	-	1376	3	ISM	ENSMUSG00000053110.14	ENST00000526343.5	1574	7	65805	-580	65805	580	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACAGTAGTTTATGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	7938512	7933574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_7934734_7936515_7936629_7938408
ENSMUSG00000053110.14_7933697_7953020_1	chr9	-	1360	4	ISM	ENSMUSG00000053110.14	ENST00000629586.2	1243	7	51297	-801	51297	458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTACATATATACACACT	NA	NA	NA	NA	NA	NA	NA	NA	7953020	7933696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952941
ENSMUSG00000053110.14_7933767_7953098_1	chr9	-	1368	4	ISM	ENSMUSG00000053110.14	ENST00000629586.2	1243	7	51219	-731	51219	388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGTGGGAAATCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	7953098	7933766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952941
ENSMUSG00000053110.14_7933833_7953136_1	chr9	-	1340	4	ISM	ENSMUSG00000053110.14	ENST00000629586.2	1243	7	51181	-665	51181	322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGTGGAACGTAGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	7953136	7933832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952941
ENSMUSG00000053110.14_7933991_7973893_1	chr9	-	1392	6	ISM	ENSMUSG00000053110.14	ENST00000537274.5	3900	8	30424	2036	30424	164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGGGTCTTATCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	7973893	7933990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952941_7953136_7962289_7962404_7973796
ENSMUSG00000053110.14_7934148_8001559_1	chr9	-	1356	7	ISM	ENSMUSG00000053110.14	ENST00000537274.5	3900	8	2758	2193	2758	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCTCTAGAACATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	8001559	7934147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952941_7953136_7962289_7962404_7973796_7973913_8001457
ENSMUSG00000053110.14_7934155_7973912_1	chr9	-	1121	5	ISM	ENSMUSG00000053110.14	ENST00000526343.5	1574	7	30405	0	30405	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAACTGAATGCTCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	7973912	7934154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952953_7953136_7973796
ENSMUSG00000053110.14_7934498_8004391_1	chr9	-	1308	7	NNC	ENSMUSG00000053110.14	novel	1243	7	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCAGGGAGCCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	8004391	7934497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_7934721_7936511_7936629_7938408_7938540_7952941_7953136_7973796_7973913_8001457_8001709_8004115
ENSMUSG00000053110.14_7934498_8004391_2	chr9	-	1317	7	FSM	ENSMUSG00000053110.14	ENST00000629586.2	1243	7	-74	0	-74	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCAGGGAGCCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	8004391	7934497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952941_7953136_7973796_7973913_8001457_8001709_8004115
ENSMUSG00000053110.14_7934498_8004391_3	chr9	-	1431	8	FSM	ENSMUSG00000053110.14	ENST00000537274.5	3900	8	-74	2543	-74	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCAGGGAGCCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	8004391	7934497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952941_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
ENSMUSG00000053110.14_7934498_8004391_4	chr9	-	1316	7	NNC	ENSMUSG00000053110.14	novel	1243	7	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCAGGGAGCCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	8004391	7934497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_7934734_7936515_7936629_7938408_7938540_7952941_7953136_7973796_7973913_8001458_8001709_8004115
ENSMUSG00000053110.14_7936562_7973876_1	chr9	-	634	6	ISM	ENSMUSG00000053110.14	ENST00000615667.4	3948	9	30441	4607	30441	-2064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACCCCAGACGACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	7973876	7936561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_7936629_7938408_7938540_7950492_7950541_7952941_7953136_7962289_7962404_7973796
ENSMUSG00000053110.14_7938464_8001547_1	chr9	-	638	6	ISM	ENSMUSG00000053110.14	ENST00000615667.4	3948	9	2770	6509	2770	-3966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTCAGGAATTGAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	8001547	7938463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_7938540_7950492_7950541_7952941_7953136_7962289_7962404_7973796_7973913_8001457
ENSMUSG00000053113.4_117858728_117859804_1	chr11	-	521	2	FSM	ENSMUSG00000053113.4	ENSMUST00000054002.4	2552	2	208	1823	208	-1823	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCAGCCAGTTCCCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	117859804	117858727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_117859145_117859700
ENSMUSG00000053119.12_71520836_71556803_1	chr6	+	778	5	FSM	ENSMUSG00000053119.12	ENST00000409225.2	1117	5	-13	352	-13	-352	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCCTCCTCTAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	71520835	71556803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_71521018_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ENSMUSG00000053119.12_71520901_71554776_1	chr6	+	542	5	ISM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	120	3787	0	-2379	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAGCAGCTGAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	71520900	71554776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714
ENSMUSG00000053119.12_71520913_71554782_1	chr6	+	536	5	ISM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	132	3781	12	-2373	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCTGAGATGGAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	71520912	71554782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714
ENSMUSG00000053119.12_71529390_71556662_1	chr6	+	509	5	ISM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	8609	1901	8489	-493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGAGCCTGAACCCGC	NA	NA	NA	NA	NA	NA	NA	NA	71529389	71556662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ENSMUSG00000053119.12_71551098_71557030_1	chr6	+	644	3	ISM	ENSMUSG00000053119.12	ENST00000409225.2	1117	5	30249	125	30197	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCCATTTTCTCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	71551097	71557030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71551221_71554714_71554830_71556624
ENSMUSG00000053119.12_71551098_71557155_1	chr6	+	769	3	ISM	ENSMUSG00000053119.12	ENST00000409225.2	1117	5	30249	0	30197	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATTGTAAATGTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	71551097	71557155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_71551221_71554714_71554830_71556624
ENSMUSG00000053134.14_31672666_31680217_1	chr5	-	1388	4	ISM	ENSMUSG00000053134.14	ENSMUST00000200721.4	1657	5	2395	0	2357	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATGACGTCTATAATA	NA	NA	NA	NA	NA	NA	NA	NA	31680217	31672665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31673271_31675610_31675849_31677426_31677752_31679997
ENSMUSG00000053134.14_31672833_31680457_1	chr5	-	1461	4	ISM	ENSMUSG00000053134.14	ENST00000406540.5	2100	6	2117	-175	2117	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCAGACCAAAGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	31680457	31672832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31673271_31675610_31675849_31677426_31677752_31679997
ENSMUSG00000053134.14_31673250_31677607_1	chr5	-	440	3	ISM	ENSMUSG00000053134.14	ENST00000406540.5	2100	6	4967	242	4967	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTGGAACCTGGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	31677607	31673249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31673271_31675610_31675849_31677426
ENSMUSG00000053137.8_89026689_89028674_1	chr15	-	1585	3	ISM	ENSMUSG00000053137.8	ENSMUST00000088823.5	2461	12	5157	-1	5157	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTCTGGATCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	89028674	89026688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89028021_89028343_89028518_89028595
ENSMUSG00000053137.8_89026942_89030045_1	chr15	-	1525	6	ISM	ENSMUSG00000053137.8	ENSMUST00000088823.5	2461	12	3786	252	3786	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCCTTGAGGTTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	89030045	89026941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029379_89029577_89029650_89030004
ENSMUSG00000053137.8_89027113_89030500_1	chr15	-	1532	9	ISM	ENSMUSG00000053137.8	ENSMUST00000088823.5	2461	12	3331	423	3331	-423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCAGGATCCTGAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	89030500	89027112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029379_89029577_89029650_89030004_89030120_89030205_89030254_89030341_89030372_89030474
ENSMUSG00000053137.8_89027183_89030559_1	chr15	-	1521	9	ISM	ENSMUSG00000053137.8	ENSMUST00000088823.5	2461	12	3272	493	3272	-493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTAGACCAAAGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	89030559	89027182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029379_89029577_89029650_89030004_89030120_89030205_89030254_89030341_89030372_89030474
ENSMUSG00000053137.8_89027304_89030989_1	chr15	-	1564	11	ISM	ENSMUSG00000053137.8	ENSMUST00000088823.5	2461	12	2842	614	2842	-614	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAATCTCTGAGCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	89030989	89027303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029379_89029577_89029650_89030004_89030120_89030205_89030254_89030341_89030372_89030474_89030587_89030673_89030733_89030911
ENSMUSG00000053137.8_89027454_89033697_1	chr15	-	1563	12	FSM	ENSMUSG00000053137.8	ENSMUST00000088823.5	2461	12	134	764	134	-764	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATGGGAAAGCTGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	89033697	89027453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029379_89029577_89029650_89030004_89030120_89030205_89030254_89030341_89030372_89030474_89030587_89030673_89030733_89030911_89031042_89033600
ENSMUSG00000053137.8_89027504_89033697_1	chr15	-	1513	12	FSM	ENSMUSG00000053137.8	ENSMUST00000088823.5	2461	12	134	814	134	-814	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAGAGGCAAGCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	89033697	89027503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029379_89029577_89029650_89030004_89030120_89030205_89030254_89030341_89030372_89030474_89030587_89030673_89030733_89030911_89031042_89033600
ENSMUSG00000053137.8_89027574_89033831_1	chr15	-	1577	12	FSM	ENSMUSG00000053137.8	ENSMUST00000088823.5	2461	12	0	884	0	-884	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCCTGGAGACTCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	89033831	89027573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029379_89029577_89029650_89030004_89030120_89030205_89030254_89030341_89030372_89030474_89030587_89030673_89030733_89030911_89031042_89033600
ENSMUSG00000053141.17_161370748_161376424_1	chr2	-	1078	4	ISM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	393277	1191	393277	-1191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTAGGGAGAGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	161376424	161370747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_161371490_161372356_161372493_161375400_161375565_161376388
ENSMUSG00000053141.17_161370921_161389291_1	chr2	-	1083	5	ISM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	380410	1364	380410	-1364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCCTGGATACCCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	161389291	161370920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_161371490_161372356_161372493_161375400_161375565_161376388_161376515_161389203
ENSMUSG00000053141.17_161371036_161393765_1	chr2	-	1111	6	ISM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	375936	1479	375936	-1479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATGCTATCCTGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	161393765	161371035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_161371490_161372356_161372493_161375400_161375565_161376388_161376515_161389203_161389336_161393666
ENSMUSG00000053141.17_161375401_161402205_1	chr2	-	1154	8	ISM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	367496	5844	367496	-5844	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCTGTGGAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	161402205	161375400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_161375565_161376388_161376515_161389203_161389336_161393666_161393841_161395649_161395800_161397333_161397470_161400739_161400895_161402088
ENSMUSG00000053141.17_161376389_161406644_1	chr2	-	1088	8	ISM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	363057	6832	363057	-6832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACAGAGCCACCATG	NA	NA	NA	NA	NA	NA	NA	NA	161406644	161376388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_161376515_161389203_161389336_161393666_161393841_161395649_161395800_161397333_161397470_161400739_161400895_161402088_161402206_161406546
ENSMUSG00000053141.17_161389265_161429520_1	chr2	-	1069	10	ISM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	340181	19708	340181	-19708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTTTGATTATAATT	NA	NA	NA	NA	NA	NA	NA	NA	161429520	161389264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_161389336_161393666_161393841_161395649_161395800_161397333_161397470_161400739_161400895_161402088_161402206_161406546_161406645_161408044_161408082_161417645_161417723_161429466
ENSMUSG00000053141.17_161395650_161498124_1	chr2	-	1112	10	ISM	ENSMUSG00000053141.17	ENST00000373198.8	5112	25	271577	26093	271577	-26093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGACAAAGCCGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	161498124	161395649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_161395800_161397333_161397470_161400739_161400895_161402088_161402206_161406546_161406645_161408044_161408082_161417645_161417723_161429466_161429555_161449177_161449369_161498061
ENSMUSG00000053141.17_161395726_161498162_1	chr2	-	1074	10	ISM	ENSMUSG00000053141.17	ENST00000373198.8	5112	25	271539	26169	271539	-26169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCGCTCTCTCTACTACA	NA	NA	NA	NA	NA	NA	NA	NA	161498162	161395725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_161395800_161397333_161397470_161400739_161400895_161402088_161402206_161406546_161406645_161408044_161408082_161417645_161417723_161429466_161429555_161449177_161449369_161498061
ENSMUSG00000053141.17_161402117_161608231_1	chr2	-	1077	12	ISM	ENSMUSG00000053141.17	ENST00000373198.8	5112	25	161470	32560	161470	-32560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCATCCGCACCTTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	161608231	161402116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_161402206_161406546_161406645_161408044_161408082_161417645_161417723_161429466_161429555_161449177_161449369_161498061_161498211_161528988_161529019_161539893_161540030_161560274_161560332_161574798_161574836_161608143
ENSMUSG00000053141.17_161406587_161608357_1	chr2	-	1074	11	ISM	ENSMUSG00000053141.17	ENST00000373198.8	5112	25	161344	37030	161344	-37030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATCGTCATGGTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	161608357	161406586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_161406645_161408044_161408082_161417645_161417723_161429466_161429555_161449177_161449369_161498061_161498211_161528988_161529019_161539893_161540030_161560274_161560332_161574798_161574836_161608143
ENSMUSG00000053141.17_161449181_161653889_1	chr2	-	1009	9	ISM	ENSMUSG00000053141.17	ENST00000373198.8	5112	25	115812	79624	115812	-79624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAAGAGCTTAGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	161653889	161449180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_161449369_161498061_161498211_161528988_161529019_161539893_161540030_161560274_161560332_161574798_161574836_161608143_161608418_161652469_161652573_161653854
ENSMUSG00000053141.17_161449213_161653983_1	chr2	-	1071	9	ISM	ENSMUSG00000053141.17	ENST00000373198.8	5112	25	115718	79656	115718	-79656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCAGGGCTACGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	161653983	161449212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_161449369_161498061_161498211_161528988_161529019_161539893_161540030_161560274_161560332_161574798_161574836_161608143_161608418_161652469_161652573_161653854
ENSMUSG00000053141.17_161449272_161654049_1	chr2	-	1078	9	ISM	ENSMUSG00000053141.17	ENST00000373198.8	5112	25	115652	79715	115652	-79715	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTCCAGCCTGCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	161654049	161449271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_161449369_161498061_161498211_161528988_161529019_161539893_161540030_161560274_161560332_161574798_161574836_161608143_161608418_161652469_161652573_161653854
ENSMUSG00000053141.17_161498153_161769467_1	chr2	-	1073	10	ISM	ENSMUSG00000053141.17	ENST00000373198.8	5112	25	234	128596	234	-128596	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTCGACTGACAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	161769467	161498152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_161498211_161528988_161529019_161539893_161540030_161560274_161560332_161574798_161574836_161608143_161608418_161652469_161652573_161653854_161654057_161743367_161743478_161769401
ENSMUSG00000053141.17_161539929_161769589_1	chr2	-	1072	8	ISM	ENSMUSG00000053141.17	ENST00000373198.8	5112	25	112	170372	112	-170372	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCCTGGGGGTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	161769589	161539928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_161540030_161560274_161560332_161574798_161574836_161608143_161608418_161652469_161652573_161653854_161654057_161743367_161743478_161769401
ENSMUSG00000053141.17_161539929_161769642_1	chr2	-	1125	8	ISM	ENSMUSG00000053141.17	ENST00000373198.8	5112	25	59	170372	59	-170372	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCCTGGGGGTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	161769642	161539928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_161540030_161560274_161560332_161574798_161574836_161608143_161608418_161652469_161652573_161653854_161654057_161743367_161743478_161769401
ENSMUSG00000053153.15_69866147_69935701_1	chr1	+	898	9	FSM	ENSMUSG00000053153.15	ENST00000272898.11	861	9	-37	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTTGGATATAAATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	69866146	69935701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_69866281_69882127_69882175_69883437_69883534_69892481_69892601_69897631_69897770_69909422_69909531_69912292_69912411_69926650_69926718_69935630
ENSMUSG00000053153.15_69866147_69935701_2	chr1	+	891	9	NNC	ENSMUSG00000053153.15	novel	861	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTTGGATATAAATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	69866146	69935701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_69866281_69882127_69882175_69883444_69883534_69892481_69892601_69897631_69897770_69909422_69909531_69912292_69912411_69926650_69926718_69935630
ENSMUSG00000053158.11_80027765_80032619_1	chr7	-	1186	11	ISM	ENSMUSG00000053158.11	ENST00000444422.2	2260	17	4463	86	4463	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	922	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGGGCCTATGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80032619	80027764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80027823_80028289_80028413_80028525_80028684_80029358_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80032060_80032145_80032268_80032456_80032558
ENSMUSG00000053158.11_80028289_80032937_1	chr7	-	1521	12	ISM	ENSMUSG00000053158.11	ENST00000394300.7	2296	17	4145	610	4145	-610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCCACAGATTTATGAT	NA	NA	NA	NA	NA	NA	NA	NA	80032937	80028288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80028413_80028525_80028684_80029358_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80031348_80031559_80032060_80032145_80032268_80032456_80032558_80032682_80032817
ENSMUSG00000053158.11_80028289_80032938_1	chr7	-	1312	11	ISM	ENSMUSG00000053158.11	ENST00000444422.2	2260	17	4144	610	4144	-610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCCACAGATTTATGAT	NA	NA	NA	NA	NA	NA	NA	NA	80032938	80028288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80028413_80028525_80028684_80029358_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80032060_80032145_80032268_80032456_80032558_80032682_80032817
ENSMUSG00000053158.11_80028525_80033154_1	chr7	-	1536	12	ISM	ENSMUSG00000053158.11	ENST00000394300.7	2296	17	3928	846	3928	-846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGATTCTCACCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	80033154	80028524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80028684_80029358_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80031348_80031559_80032060_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016
ENSMUSG00000053158.11_80028610_80033110_1	chr7	-	1197	11	ISM	ENSMUSG00000053158.11	ENST00000444422.2	2260	17	3972	931	3972	-931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCTGATGGGATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	80033110	80028609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80028684_80029358_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80032060_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016
ENSMUSG00000053158.11_80029372_80033608_1	chr7	-	1181	11	ISM	ENSMUSG00000053158.11	ENST00000444422.2	2260	17	3474	1693	3474	-1693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTATCCACAGGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	80033608	80029371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80032060_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581
ENSMUSG00000053158.11_80029414_80033694_1	chr7	-	1435	12	ISM	ENSMUSG00000053158.11	ENST00000394300.7	2296	17	3388	1735	3388	-1735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGGACGCAGCTGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	80033694	80029413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80031348_80031559_80032060_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581
ENSMUSG00000053158.11_80029416_80033665_1	chr7	-	1194	11	ISM	ENSMUSG00000053158.11	ENST00000444422.2	2260	17	3417	1737	3417	-1737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGGGGACGCAGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	80033665	80029415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80032060_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581
ENSMUSG00000053158.11_80029463_80033720_1	chr7	-	1202	11	ISM	ENSMUSG00000053158.11	ENST00000444422.2	2260	17	3362	1784	3362	-1784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGGACAGAGGGAGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	80033720	80029462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80032060_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581
ENSMUSG00000053158.11_80029631_80034007_1	chr7	-	1231	11	ISM	ENSMUSG00000053158.11	ENST00000444422.2	2260	17	3075	1952	3075	-1952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCGTCTCATCGGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	80034007	80029630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80032060_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581_80033766_80033938
ENSMUSG00000053158.11_80029998_80036940_1	chr7	-	1259	11	ISM	ENSMUSG00000053158.11	ENST00000414248.6	2195	17	744	2319	142	-2319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCACCTGACCTCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	80036940	80029997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80030076_80030586_80030641_80030912_80031036_80032060_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581_80033766_80033938_80034036_80036869
ENSMUSG00000053158.11_80030060_80037004_1	chr7	-	1261	11	ISM	ENSMUSG00000053158.11	ENST00000414248.6	2195	17	680	2381	78	-2381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTAGTGGCCGCCTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	80037004	80030059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80030076_80030586_80030641_80030912_80031036_80032060_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581_80033766_80033938_80034036_80036869
ENSMUSG00000053158.11_80030912_80037167_1	chr7	-	1355	9	ISM	ENSMUSG00000053158.11	ENST00000414248.6	2195	17	517	3233	0	-3233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTGTGGACAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	80037167	80030911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80031036_80032060_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581_80033766_80033938_80034036_80036869
ENSMUSG00000053158.11_80030912_80037167_2	chr7	-	1565	10	ISM	ENSMUSG00000053158.11	ENST00000394300.7	2296	17	-85	3233	0	-3233	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTGTGGACAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	80037167	80030911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80031036_80031348_80031559_80032060_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581_80033766_80033938_80034036_80036869
ENSMUSG00000053158.11_80032061_80037619_1	chr7	-	1190	9	ISM	ENSMUSG00000053158.11	ENST00000414248.6	2195	17	65	4382	65	-4382	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAGTACCAAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	80037619	80032060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581_80033766_80033938_80034036_80036869_80037092_80037584
ENSMUSG00000053158.11_80032082_80036573_1	chr7	-	927	8	ISM	ENSMUSG00000053158.11	ENST00000444422.2	2260	17	509	4403	509	-4403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCGCCCCAAGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	80036573	80032081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581_80033766_80033938_80034036_80036558
ENSMUSG00000053158.11_80032268_80036732_1	chr7	-	1024	7	ISM	ENSMUSG00000053158.11	ENST00000444422.2	2260	17	350	4589	350	-4589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATGCGCCCTACCACGA	NA	NA	NA	NA	NA	NA	NA	NA	80036732	80032267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581_80033766_80033938_80034036_80036558
ENSMUSG00000053158.11_80032395_80036936_1	chr7	-	964	8	ISM	ENSMUSG00000053158.11	ENST00000444422.2	2260	17	146	4716	146	-4716	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCAGCCAGGACAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	80036936	80032394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581_80033766_80033938_80034036_80036558_80036733_80036869
ENSMUSG00000053192.10_95126686_95135765_1	chr3	-	1460	2	FSM	ENSMUSG00000053192.10	ENSMUST00000065482.6	1923	2	223	240	223	-240	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTGATTTTGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	95135765	95126685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95127775_95135394
ENSMUSG00000053192.10_95126686_95135888_1	chr3	-	1583	2	FSM	ENSMUSG00000053192.10	ENSMUST00000065482.6	1923	2	100	240	100	-240	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTGATTTTGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	95135888	95126685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95127775_95135394
ENSMUSG00000053216.16_23662734_23665955_1	chr13	-	599	2	ISM	ENSMUSG00000053216.16	ENST00000429381.5	1951	4	4693	560	4693	-560	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGATGTTTGGAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	23665955	23662733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_23663271_23665893
ENSMUSG00000053216.16_23662791_23666006_1	chr13	-	593	2	ISM	ENSMUSG00000053216.16	ENST00000429381.5	1951	4	4642	617	4642	-617	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGCGTGGAAAGGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	23666006	23662790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_23663271_23665893
ENSMUSG00000053216.16_23662861_23666070_1	chr13	-	587	2	ISM	ENSMUSG00000053216.16	ENST00000429381.5	1951	4	4578	687	4578	-687	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTCAGGGAAGCATTACT	NA	NA	NA	NA	NA	NA	NA	NA	23666070	23662860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_23663271_23665893
ENSMUSG00000053216.16_23662964_23666982_1	chr13	-	623	3	ISM	ENSMUSG00000053216.16	ENST00000429381.5	1951	4	3666	790	3666	-790	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATGACCAGAGAAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	23666982	23662963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_23663271_23665893_23666116_23666888
ENSMUSG00000053216.16_23663017_23667030_1	chr13	-	618	3	ISM	ENSMUSG00000053216.16	ENST00000429381.5	1951	4	3618	843	3618	-843	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTGACGTGGTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	23667030	23663016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_23663271_23665893_23666116_23666888
ENSMUSG00000053216.16_23663207_23670379_1	chr13	-	649	4	FSM	ENSMUSG00000053216.16	ENST00000429381.5	1951	4	269	1033	269	-1033	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCTAGGAGACAAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	23670379	23663206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_23663271_23665893_23666116_23666888_23667171_23670298
ENSMUSG00000053216.16_23666005_23670499_1	chr13	-	594	3	ISM	ENSMUSG00000053216.16	ENST00000429381.5	1951	4	149	3831	149	-3831	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGAAGAAATCTATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	23670499	23666004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_23666116_23666888_23667171_23670298
ENSMUSG00000053219.16_22049818_22059708_1	chr10	+	1110	6	ISM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	398	105	0	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCAGTTATCACATCGT	NA	NA	NA	NA	NA	NA	NA	NA	22049817	22059708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ENSMUSG00000053219.16_22050191_22059816_1	chr10	+	1171	5	ISM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	771	-3	373	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	22050190	22059816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ENSMUSG00000053219.16_22057845_22059816_1	chr10	+	533	2	ISM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	8425	-3	8027	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	22057844	22059816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_22058015_22059453
ENSMUSG00000053219.16_22057900_22059816_1	chr10	+	478	2	ISM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	8480	-3	8082	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	22057899	22059816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_22058015_22059453
ENSMUSG00000053226.8_85542299_85549237_1	chr8	-	1104	2	FSM	ENSMUSG00000053226.8	ENSMUST00000065539.6	1585	2	215	266	215	-266	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGACACTCAGCAAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	85549237	85542298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85543163_85548997
ENSMUSG00000053226.8_85542459_85549452_1	chr8	-	1159	2	FSM	ENSMUSG00000053226.8	ENSMUST00000065539.6	1585	2	0	426	0	-426	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAGAGGGCTTCAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	85549452	85542458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85543163_85548997
ENSMUSG00000053253.17_105496008_105546430_1	chr14	+	2230	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	0	302	0	-302	multi-exon	TRUE	canonical	NA	NA	NA	NA	1117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGAGTTTGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	105496007	105546430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
ENSMUSG00000053253.17_105496253_105546732_1	chr14	+	2287	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	245	0	245	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTATTTCTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	105496252	105546732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
ENSMUSG00000053253.17_105525050_105546732_1	chr14	+	2103	7	ISM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	29042	0	29042	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTATTTCTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	105525049	105546732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
ENSMUSG00000053286.12_151304457_151316616_1	chr1	+	740	5	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	58	17298	58	-17296	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTGACATGCTAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	151304456	151316616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151304854_151309544_151309656_151311485_151311593_151315266_151315332_151316556
ENSMUSG00000053286.12_151304457_151316686_1	chr1	+	810	5	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	58	17228	58	-17226	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTACGTGATCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	151304456	151316686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151304854_151309544_151309656_151311485_151311593_151315266_151315332_151316556
ENSMUSG00000053286.12_151304732_151324018_1	chr1	+	753	8	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	333	9896	333	-9894	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGGCAAAGCACCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	151304731	151324018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151304854_151309544_151309656_151311485_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004
ENSMUSG00000053286.12_151304796_151324067_1	chr1	+	738	8	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	397	9847	397	-9845	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGAAAACTCTGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	151304795	151324067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151304854_151309544_151309656_151311485_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004
ENSMUSG00000053286.12_151304836_151324141_1	chr1	+	772	8	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	437	9773	437	-9771	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGAAGAGGGTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	151304835	151324141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151304854_151309544_151309656_151311485_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004
ENSMUSG00000053286.12_151311542_151325690_1	chr1	+	734	7	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	7143	8224	7143	-8222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCGTTCAGAAATGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	151311541	151325690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650
ENSMUSG00000053286.12_151316555_151325863_1	chr1	+	793	5	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	12156	8051	12156	-8049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCAAACTGCCAATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	151316554	151325863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650
ENSMUSG00000053286.12_151316660_151327858_1	chr1	+	748	6	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	12261	6056	12261	-6054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGGTAGTTGTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	151316659	151327858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798
ENSMUSG00000053286.12_151318997_151328906_1	chr1	+	808	5	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	14598	5008	14598	-5006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACGTACCTAAGACAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	151318996	151328906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827
ENSMUSG00000053286.12_151324062_151329704_1	chr1	+	739	5	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	19663	4210	19663	-4208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATTCAACCCCTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	151324061	151329704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635
ENSMUSG00000053286.12_151324196_151330762_1	chr1	+	737	6	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	19797	3152	19797	-3150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCACAATAGATATTTACA	NA	NA	NA	NA	NA	NA	NA	NA	151324195	151330762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728
ENSMUSG00000053286.12_151325647_151333240_1	chr1	+	744	6	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	21248	674	21248	-672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACCTAGCCAAAAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	151325646	151333240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213
ENSMUSG00000053286.12_151325803_151333502_1	chr1	+	758	7	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	21404	412	21404	-410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATCCGTACCGATGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	151325802	151333502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ENSMUSG00000053286.12_151325845_151333568_1	chr1	+	782	7	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	21446	346	21446	-344	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTGGAGCACAATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	151325844	151333568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ENSMUSG00000053286.12_151327878_151333683_1	chr1	+	799	6	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	23479	231	23479	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGAGGGGGTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	151327877	151333683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ENSMUSG00000053286.12_151327970_151333694_1	chr1	+	718	6	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	23571	220	23571	-218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTTCTCAGGGTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	151327969	151333694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ENSMUSG00000053289.9_53009935_53068632_1	chr9	-	984	4	ISM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	90721	0	90721	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATTGTTTTTATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	53068632	53009934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470
ENSMUSG00000053289.9_53010098_53115450_1	chr9	-	1033	6	ISM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	43903	163	43903	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGGCAAGGTTCTGGATC	NA	NA	NA	NA	NA	NA	NA	NA	53115450	53010097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358
ENSMUSG00000053289.9_53010149_53115511_1	chr9	-	1043	6	ISM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	43842	214	43842	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGAGCTCTACTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	53115511	53010148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358
ENSMUSG00000053289.9_53010378_53115725_1	chr9	-	1028	6	ISM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	43628	443	43628	-443	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTTCCTGTACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	53115725	53010377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358
ENSMUSG00000053289.9_53071226_53136874_1	chr9	-	1030	7	ISM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	22479	61291	22479	-61291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAACATTTACTGATG	NA	NA	NA	NA	NA	NA	NA	NA	53136874	53071225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772
ENSMUSG00000053289.9_53115362_53140460_1	chr9	-	1032	7	ISM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	18893	105427	18893	-105427	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGGTAAGTGAACTCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	53140460	53115361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424
ENSMUSG00000053289.9_53115421_53140517_1	chr9	-	1030	7	ISM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	18836	105486	18836	-105486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCACAGTGAAGCGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	53140517	53115420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424
ENSMUSG00000053289.9_53115721_53146672_1	chr9	-	1064	9	ISM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	12681	105786	12681	-105786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCTCCCTCCCCAACGAT	NA	NA	NA	NA	NA	NA	NA	NA	53146672	53115720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562
ENSMUSG00000053289.9_53118764_53147858_1	chr9	-	1126	9	ISM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	11495	108829	11495	-108829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATTGATTACATAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	53147858	53118763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699
ENSMUSG00000053289.9_53124552_53149461_1	chr9	-	1045	8	ISM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	9892	114617	9892	-114617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTGAAGGAGATCAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	53149461	53124551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347
ENSMUSG00000053289.9_53136805_53159226_1	chr9	-	1029	8	ISM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	127	126870	127	-126870	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCCACTGATATTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	53159226	53136804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
ENSMUSG00000053291.16_26867852_26875318_1	chr7	-	932	6	NNC	ENSMUSG00000053291.16	novel	1192	8	NA	NA	3003	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCGGCCTCTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	26875318	26867851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875209
ENSMUSG00000053291.16_26867852_26875663_1	chr7	-	1019	7	ISM	ENSMUSG00000053291.16	ENSMUST00000093040.13	1192	8	2658	3	2658	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCGGCCTCTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	26875663	26867851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582
ENSMUSG00000053291.16_26868120_26878305_1	chr7	-	905	8	FSM	ENSMUSG00000053291.16	ENSMUST00000093040.13	1192	8	16	271	16	-271	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCCTTCGCTGGCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	26878305	26868119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
ENSMUSG00000053310.12_37456400_37457297_2	chr9	-	307	2	FSM	ENSMUSG00000053310.12	ENST00000412681.2	1090	2	173	610	173	-610	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGTCCCAAACCCCATAC	NA	NA	NA	NA	NA	NA	NA	NA	37457297	37456399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_37456653_37457243
ENSMUSG00000053317.12_47474658_47480232_1	chr4	+	296	3	ISM	ENSMUSG00000053317.12	ENSMUST00000065678.6	564	4	0	3010	0	-3010	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCGTGGAGTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	47474657	47480232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_47474754_47474911_47475010_47480130
ENSMUSG00000053317.12_47474948_47483094_1	chr4	+	284	3	ISM	ENSMUSG00000053317.12	ENSMUST00000065678.6	564	4	290	148	290	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAAGGAAAAAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	47474947	47483094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_47475010_47480130_47480233_47482974
ENSMUSG00000053317.12_47480182_47483242_1	chr4	+	319	2	ISM	ENSMUSG00000053317.12	ENSMUST00000065678.6	564	4	5524	0	5524	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1660	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGCCTGTGCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	47480181	47483242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_47480233_47482974
ENSMUSG00000053329.8_77997900_78005608_1	chr10	-	1367	7	NNC	ENSMUSG00000053329.8	novel	1378	7	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGTCTCAGGCCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	78005608	77997899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_77998556_77999236_77999388_78000671_78000765_78003228_78003349_78004642_78004757_78005206_78005260_78005428
ENSMUSG00000053332.14_160862637_160866109_1	chr1	+	547	10	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	160862636	160866109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864171_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUSG00000053332.14_160862637_160866109_2	chr1	+	559	10	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	160862636	160866109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864451_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUSG00000053332.14_160862637_160866109_3	chr1	+	546	10	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	160862636	160866109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_160862765_160863321_160863375_160863552_160863609_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUSG00000053332.14_160862637_160866109_5	chr1	+	540	10	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	160862636	160866109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863827_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUSG00000053332.14_160862637_160866109_6	chr1	+	546	10	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	160862636	160866109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUSG00000053332.14_160862637_160866109_7	chr1	+	534	9	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	160862636	160866109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864171_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUSG00000053332.14_160862637_160866109_8	chr1	+	546	9	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	160862636	160866109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_160862765_160863321_160863431_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUSG00000053332.14_160862637_160866109_9	chr1	+	555	10	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	160862636	160866109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_160862765_160863321_160863375_160863749_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUSG00000053347.16_22181567_22211522_1	chr17	+	882	4	FSM	ENSMUSG00000053347.16	ENSMUST00000055349.15	2741	4	34	1825	27	497	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGAGAGAAACCTTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	22181566	22211522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_22181801_22207011_22207083_22209759_22209887_22211072
ENSMUSG00000053398.12_98220486_98247306_1	chr3	-	1886	12	NNC	ENSMUSG00000053398.12	novel	1893	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTCTGTGTGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	98247306	98220485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228655_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
ENSMUSG00000053398.12_98220486_98247306_2	chr3	-	1885	12	NNC	ENSMUSG00000053398.12	novel	1893	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTCTGTGTGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	98247306	98220485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241830_98241975_98247010
ENSMUSG00000053453.10_8508486_8520498_1	chr14	+	684	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	0	253	0	-115	multi-exon	TRUE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATGGACTGACCGTCG	NA	NA	NA	NA	NA	NA	NA	NA	8508485	8520498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUSG00000053453.10_8515140_8520498_1	chr14	+	558	7	ISM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	6654	253	6645	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATGGACTGACCGTCG	NA	NA	NA	NA	NA	NA	NA	NA	8515139	8520498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUSG00000053453.10_8515140_8520613_1	chr14	+	673	7	ISM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	6654	138	6645	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGTATTCATGTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	8515139	8520613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUSG00000053453.10_8516595_8520751_1	chr14	+	604	5	ISM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	8109	0	8100	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGCTCATTCAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	8516594	8520751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUSG00000053477.19_69697103_69816269_1	chr18	+	1775	14	ISM	ENSMUSG00000053477.19	ENSMUST00000202937.4	2103	15	44256	79	-28956	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTATGAATCGCAGACG	NA	NA	NA	NA	NA	NA	NA	NA	69697102	69816269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ENSMUSG00000053477.19_69697103_69816269_2	chr18	+	1770	14	NNC	ENSMUSG00000053477.19	novel	2103	15	NA	NA	-28956	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTATGAATCGCAGACG	NA	NA	NA	NA	NA	NA	NA	NA	69697102	69816269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790822_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ENSMUSG00000053477.19_69697705_69816371_1	chr18	+	1746	13	ISM	ENSMUSG00000053477.19	ENSMUST00000202937.4	2103	15	44858	-23	-28354	23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAACTTGAGGGACGACTT	NA	NA	NA	NA	NA	NA	NA	NA	69697704	69816371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ENSMUSG00000053477.19_69726263_69776049_1	chr18	+	729	4	ISM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	204	40467	204	-40144	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACACCCCCTGCCAACGG	NA	NA	NA	NA	NA	NA	NA	NA	69726262	69776049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_69726656_69766647_69766754_69769901_69770036_69775953
ENSMUSG00000053477.19_69726515_69790865_1	chr18	+	783	8	NIC	ENSMUSG00000053477.19	novel	2437	13	NA	NA	18	-25328	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCCGGAACCACGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	69726514	69790865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr18_+_69726656_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788034_69788109_69790817
ENSMUSG00000053483.16_171109532_171112530_1	chr1	-	1093	9	ISM	ENSMUSG00000053483.16	ENSMUST00000111305.8	2278	13	2967	9	2967	-9	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGTGATGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	171112530	171109531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499
ENSMUSG00000053483.16_171109696_171112568_1	chr1	-	967	9	ISM	ENSMUSG00000053483.16	ENSMUST00000111305.8	2278	13	2929	173	2929	-173	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGGGGAGGGGAGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	171112568	171109695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499
ENSMUSG00000053483.16_171112151_171114543_1	chr1	-	1073	5	ISM	ENSMUSG00000053483.16	ENSMUST00000111305.8	2278	13	954	2628	954	-2628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGGTTGTTCCCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	171114543	171112150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922
ENSMUSG00000053483.16_171112295_171115497_1	chr1	-	1092	6	ISM	ENSMUSG00000053483.16	ENSMUST00000065941.12	2219	13	67	2776	0	-2772	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTCCTGAAGCTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	171115497	171112294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
ENSMUSG00000053510.13_108857967_108876229_1	chr4	+	883	4	ISM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	115	42745	0	-42129	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGCCTCAACTGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	108857966	108876229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154
ENSMUSG00000053510.13_108858206_108884676_1	chr4	+	841	6	ISM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	354	34298	239	-33682	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGAAGCCTCGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	108858205	108884676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632
ENSMUSG00000053510.13_108870838_108890551_1	chr4	+	852	8	ISM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	12986	28423	12871	-27807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAGAGGTTTGTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	108870837	108890551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486
ENSMUSG00000053510.13_108885997_108903861_1	chr4	+	888	11	ISM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	28030	14497	28030	-14497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATAAGTACATAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	108885996	108903861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791
ENSMUSG00000053510.13_108895185_108908116_1	chr4	+	869	10	ISM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	37218	10242	37218	-10242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTATAAACTGGTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	108895184	108908116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035
ENSMUSG00000053510.13_108900593_108912224_1	chr4	+	849	8	ISM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	42626	6134	42626	-6134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGATTTTAAATCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	108900592	108912224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122
ENSMUSG00000053510.13_108901799_108913766_1	chr4	+	863	9	ISM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	43832	4592	43832	-4592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGAGCGGCCACCACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	108901798	108913766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706
ENSMUSG00000053510.13_108908062_108917046_1	chr4	+	850	9	ISM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	50095	1312	50095	-1312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAATACTCAGGTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	108908061	108917046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968
ENSMUSG00000053510.13_108915455_108918491_1	chr4	+	843	7	ISM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	57488	-133	57488	133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTAGGCAAGTGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	108915454	108918491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ENSMUSG00000053510.13_108916188_108918672_1	chr4	+	916	5	ISM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	58221	-314	58221	-302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAAGCCATCTGCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	108916187	108918672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ENSMUSG00000053510.13_108917986_108918974_1	chr4	+	912	2	ISM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	60134	0	60019	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTAACACTTGATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	108917985	108918974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_108918056_108918132
ENSMUSG00000053519.18_33579790_33793461_1	chr11	-	1842	9	NNC	ENSMUSG00000053519.18	novel	1802	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTCAATTACTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	33793461	33579789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_33580599_33583147_33583211_33584578_33584684_33592430_33592539_33593295_33593367_33594498_33594569_33595502_33595623_33640602_33640756_33793118
ENSMUSG00000053553.12_139345967_139347074_1	chr5	-	532	2	ISM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	99183	473	99183	-473	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGGACTCCTACATATT	NA	NA	NA	NA	NA	NA	NA	NA	139347074	139345966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_139346486_139347061
ENSMUSG00000053553.12_139346045_139347122_1	chr5	-	502	2	ISM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	99135	551	99135	-551	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTTTCCCCATCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	139347122	139346044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_139346486_139347061
ENSMUSG00000053553.12_139346158_139349798_1	chr5	-	481	3	ISM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	96459	664	96459	-664	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATGGTCTCCCTGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	139349798	139346157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_139346486_139347061_139347144_139349727
ENSMUSG00000053553.12_139346236_139349884_1	chr5	-	489	3	ISM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	96373	742	96373	-742	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATCTGGCCGGAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	139349884	139346235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_139346486_139347061_139347144_139349727
ENSMUSG00000053553.12_139346342_139441285_1	chr5	-	531	4	ISM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	4972	848	4972	-848	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGCAGCGCCTCCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	139441285	139346341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_139346486_139347061_139347144_139349727_139349919_139441171
ENSMUSG00000053553.12_139346398_139441287_1	chr5	-	477	4	ISM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	4970	904	4970	-904	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGATGCAGAAGCTCGAT	NA	NA	NA	NA	NA	NA	NA	NA	139441287	139346397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_139346486_139347061_139347144_139349727_139349919_139441171
ENSMUSG00000053559.14_100519520_100528623_1	chr15	-	611	3	NNC	ENSMUSG00000053559.14	novel	622	3	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAGTGCTCGAAACCGA	NA	NA	NA	NA	NA	NA	NA	NA	100528623	100519519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_100519908_100520510_100520630_100528519
ENSMUSG00000053559.14_100519520_100528623_2	chr15	-	612	3	FSM	ENSMUSG00000053559.14	ENST00000603864.5	622	3	24	-14	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAGTGCTCGAAACCGA	NA	NA	NA	NA	NA	NA	NA	NA	100528623	100519519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_100519908_100520509_100520630_100528519
ENSMUSG00000053565.11_28670798_28676700_1	chr7	-	412	5	ISM	ENSMUSG00000053565.11	ENSMUST00000207683.2	647	7	4512	0	4498	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATTGTCTCTTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	28676700	28670797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625
ENSMUSG00000053565.11_28670798_28677415_1	chr7	-	455	5	ISM	ENSMUSG00000053565.11	ENST00000592558.1	652	7	3783	-2	3783	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATTGTCTCTTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	28677415	28670797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28670864_28671956_28672083_28674027_28674095_28676625_28676701_28677294
ENSMUSG00000053565.11_28670798_28681208_1	chr7	-	471	5	FSM	ENSMUSG00000053565.11	ENST00000588934.5	459	5	-10	-2	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATTGTCTCTTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	28681208	28670797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28670864_28676625_28676701_28677294_28677416_28679868_28679968_28681098
ENSMUSG00000053565.11_28672010_28677370_1	chr7	-	369	5	ISM	ENSMUSG00000053565.11	ENSMUST00000208616.2	909	7	3919	550	3828	-550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGAAGAGAGCATTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	28677370	28672009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294
ENSMUSG00000053565.11_28674069_28681208_1	chr7	-	431	5	ISM	ENSMUSG00000053565.11	ENST00000592558.1	652	7	-10	3269	4	-2609	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAAGGCATAACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	28681208	28674068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
ENSMUSG00000053580.17_105564248_105813908_1	chr11	+	5312	25	ISM	ENSMUSG00000053580.17	ENST00000389520.8	6414	26	48364	1033	48364	-1033	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTTTTCTCCATCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	105564247	105813908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105564318_105604207_105604280_105667631_105667781_105670764_105670952_105689386_105689651_105701297_105701424_105725774_105726057_105731444_105731579_105748222_105748455_105754742_105754910_105757992_105758601_105777183_105777293_105786671_105786795_105787293_105787531_105790509_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105804866_105804897_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ENSMUSG00000053580.17_105667672_105814111_1	chr11	+	5333	23	ISM	ENSMUSG00000053580.17	ENST00000389520.8	6414	26	151788	830	151788	-830	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAGATAAAACAGCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	105667671	105814111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105667781_105670764_105670952_105689386_105689651_105701297_105701424_105725774_105726057_105731444_105731579_105748222_105748455_105754742_105754910_105757992_105758601_105777183_105777293_105786671_105786795_105787293_105787531_105790509_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105804866_105804897_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ENSMUSG00000053580.17_105667735_105814177_1	chr11	+	5336	23	ISM	ENSMUSG00000053580.17	ENST00000389520.8	6414	26	151851	764	151851	-764	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATCAGTGGATACGGTT	NA	NA	NA	NA	NA	NA	NA	NA	105667734	105814177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105667781_105670764_105670952_105689386_105689651_105701297_105701424_105725774_105726057_105731444_105731579_105748222_105748455_105754742_105754910_105757992_105758601_105777183_105777293_105786671_105786795_105787293_105787531_105790509_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105804866_105804897_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ENSMUSG00000053580.17_105670875_105814315_1	chr11	+	5318	22	ISM	ENSMUSG00000053580.17	ENST00000389520.8	6414	26	154991	626	154991	-626	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACGATTATTACAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	105670874	105814315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105670952_105689386_105689651_105701297_105701424_105725774_105726057_105731444_105731579_105748222_105748455_105754742_105754910_105757992_105758601_105777183_105777293_105786671_105786795_105787293_105787531_105790509_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105804866_105804897_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ENSMUSG00000053580.17_105689386_105814469_1	chr11	+	5396	21	ISM	ENSMUSG00000053580.17	ENST00000389520.8	6414	26	173502	472	173502	-472	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCGGGACTCTCGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	105689385	105814469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105689651_105701297_105701424_105725774_105726057_105731444_105731579_105748222_105748455_105754742_105754910_105757992_105758601_105777183_105777293_105786671_105786795_105787293_105787531_105790509_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105804866_105804897_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ENSMUSG00000053580.17_105701296_105814599_1	chr11	+	5263	20	ISM	ENSMUSG00000053580.17	ENST00000389520.8	6414	26	185412	342	185412	-342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACATCTGAGGTAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	105701295	105814599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105701424_105725774_105726057_105731444_105731579_105748222_105748455_105754742_105754910_105757992_105758601_105777183_105777293_105786671_105786795_105787293_105787531_105790509_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105804866_105804897_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ENSMUSG00000053580.17_105725830_105814941_1	chr11	+	5422	19	ISM	ENSMUSG00000053580.17	ENST00000389520.8	6414	26	209946	0	209946	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTAGGACACGTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	105725829	105814941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105726057_105731444_105731579_105748222_105748455_105754742_105754910_105757992_105758601_105777183_105777293_105786671_105786795_105787293_105787531_105790509_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105804866_105804897_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ENSMUSG00000053580.17_105725895_105814941_1	chr11	+	5357	19	ISM	ENSMUSG00000053580.17	ENST00000389520.8	6414	26	210011	0	210011	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTAGGACACGTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	105725894	105814941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105726057_105731444_105731579_105748222_105748455_105754742_105754910_105757992_105758601_105777183_105777293_105786671_105786795_105787293_105787531_105790509_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105804866_105804897_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ENSMUSG00000053580.17_105725975_105814941_1	chr11	+	5277	19	ISM	ENSMUSG00000053580.17	ENST00000389520.8	6414	26	210091	0	210091	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTAGGACACGTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	105725974	105814941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_105726057_105731444_105731579_105748222_105748455_105754742_105754910_105757992_105758601_105777183_105777293_105786671_105786795_105787293_105787531_105790509_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105804866_105804897_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ENSMUSG00000053644.14_56659270_56661414_1	chr18	-	876	2	ISM	ENSMUSG00000053644.14	ENSMUST00000172734.8	1880	16	33986	-407	33889	407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATGGGTTTCTCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	56661414	56659269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_56660080_56661348
ENSMUSG00000053644.14_56659527_56665133_1	chr18	-	882	5	ISM	ENSMUSG00000053644.14	ENSMUST00000172734.8	1880	16	30267	-150	30170	150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTTAACACTGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	56665133	56659526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052
ENSMUSG00000053644.14_56664561_56695277_1	chr18	-	1270	13	FSM	ENSMUSG00000053644.14	ENST00000636886.1	1296	13	26	0	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTAGAGGCTCGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	56695277	56664560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56695104
ENSMUSG00000053644.14_56664561_56695277_2	chr18	-	1265	13	NNC	ENSMUSG00000053644.14	novel	1296	13	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTAGAGGCTCGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	56695277	56664560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675301_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56695104
ENSMUSG00000053644.14_56664610_56678082_1	chr18	-	706	9	ISM	ENSMUSG00000053644.14	ENST00000637272.1	1489	16	17221	49	17221	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACGTCAATATTCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	56678082	56664609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670363_56671772_56671815_56675296_56675395_56678036
ENSMUSG00000053644.14_56664836_56681551_1	chr18	-	737	10	ISM	ENSMUSG00000053644.14	ENST00000637272.1	1489	16	13752	275	13752	-275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAAGTAGTATCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	56681551	56664835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670363_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518
ENSMUSG00000053644.14_56665611_56683492_1	chr18	-	749	9	ISM	ENSMUSG00000053644.14	ENST00000637272.1	1489	16	11811	1050	11811	-1050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCGTGGAAGAAGCCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	56683492	56665610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_56665667_56667261_56667347_56670275_56670363_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367
ENSMUSG00000053644.14_56667262_56684312_1	chr18	-	773	9	ISM	ENSMUSG00000053644.14	ENST00000637272.1	1489	16	10991	2701	10991	-2701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTAGCTCACTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	56684312	56667261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_56667347_56670275_56670363_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231
ENSMUSG00000053644.14_56670320_56692361_1	chr18	-	712	9	ISM	ENSMUSG00000053644.14	ENST00000637272.1	1489	16	2942	5759	2942	-5759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGGGAACAGCTGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	56692361	56670319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_56670363_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293
ENSMUSG00000053644.14_56671772_56693901_1	chr18	-	722	9	ISM	ENSMUSG00000053644.14	ENST00000637272.1	1489	16	1402	7211	1402	-7211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGCTGCCCCTTTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	56693901	56671771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847
ENSMUSG00000053644.14_56675318_56695269_1	chr18	-	823	9	ISM	ENSMUSG00000053644.14	ENST00000637272.1	1489	16	34	10757	34	-10757	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTGCAGGAGAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	56695269	56675317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
ENSMUSG00000053647.5_139408906_139412200_1	chr5	+	1182	3	FSM	ENSMUSG00000053647.5	ENSMUST00000066211.5	2537	3	0	1355	0	-1355	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGCCTCAGTGTCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	139408905	139412200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_139409110_139409415_139409628_139411434
ENSMUSG00000053647.5_139409035_139412318_1	chr5	+	1171	3	FSM	ENSMUSG00000053647.5	ENSMUST00000066211.5	2537	3	129	1237	129	-1237	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTCATCATGCCCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	139409034	139412318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_139409110_139409415_139409628_139411434
ENSMUSG00000053647.5_139409566_139412531_1	chr5	+	1159	2	ISM	ENSMUSG00000053647.5	ENSMUST00000066211.5	2537	3	660	1024	660	-1024	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCAAGCAGTCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	139409565	139412531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_139409628_139411434
ENSMUSG00000053654.8_100153896_100157833_1	chr11	-	847	6	FSM	ENSMUSG00000053654.8	ENST00000451704.1	879	6	32	0	32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCTGTCTGCGTATGAT	NA	NA	NA	NA	NA	NA	NA	NA	100157833	100153895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100153994_100154119_100154251_100155267_100155525_100155754_100155881_100156425_100156588_100157760
ENSMUSG00000053654.8_100153896_100157833_2	chr11	-	843	6	NNC	ENSMUSG00000053654.8	novel	879	6	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCTGTCTGCGTATGAT	NA	NA	NA	NA	NA	NA	NA	NA	100157833	100153895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_100153994_100154119_100154251_100155267_100155525_100155754_100155877_100156425_100156588_100157760
ENSMUSG00000053684.9_121575842_121586586_1	chr10	+	780	3	FSM	ENSMUSG00000053684.9	ENST00000544871.1	1236	3	14	442	0	-442	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCCAGTTTTATCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	121575841	121586586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_121575957_121581235_121581522_121586207
ENSMUSG00000053684.9_121581235_121586757_1	chr10	+	837	2	ISM	ENSMUSG00000053684.9	ENST00000544871.1	1236	3	5407	271	5392	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGCACTGGCCCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	121581234	121586757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_121581522_121586207
ENSMUSG00000053693.17_85650358_85672683_1	chr8	-	1365	13	NNC	ENSMUSG00000053693.17	novel	1372	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCATCTTTGGGCACCG	NA	NA	NA	NA	NA	NA	NA	NA	85672683	85650357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_85650569_85650656_85650743_85651903_85651972_85652037_85652171_85652273_85652376_85655208_85655419_85655578_85655655_85655850_85656012_85657454_85657528_85661872_85661949_85662334_85662424_85664169_85664202_85672635
ENSMUSG00000053693.17_85650358_85672683_2	chr8	-	1363	13	NNC	ENSMUSG00000053693.17	novel	1372	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCATCTTTGGGCACCG	NA	NA	NA	NA	NA	NA	NA	NA	85672683	85650357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_85650569_85650656_85650735_85651903_85651972_85652037_85652171_85652273_85652376_85655208_85655419_85655578_85655655_85655850_85656012_85657448_85657528_85661872_85661949_85662334_85662424_85664169_85664202_85672635
ENSMUSG00000053693.17_85650358_85672683_3	chr8	-	1361	12	NNC	ENSMUSG00000053693.17	novel	1372	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCATCTTTGGGCACCG	NA	NA	NA	NA	NA	NA	NA	NA	85672683	85650357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_85650569_85650656_85650743_85651903_85651972_85652037_85652171_85652273_85652376_85655208_85655419_85655578_85655655_85655850_85656012_85657448_85657528_85661872_85661949_85662334_85662424_85672613
ENSMUSG00000053693.17_85650358_85672683_4	chr8	-	1357	12	NNC	ENSMUSG00000053693.17	novel	1372	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCATCTTTGGGCACCG	NA	NA	NA	NA	NA	NA	NA	NA	85672683	85650357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_85650569_85650656_85650743_85651903_85651972_85652037_85652171_85652273_85652376_85655208_85655419_85655578_85655655_85655850_85656012_85657448_85657528_85661872_85661949_85662334_85662442_85672635
ENSMUSG00000053693.17_85650358_85672683_5	chr8	-	1364	13	NNC	ENSMUSG00000053693.17	novel	1372	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCATCTTTGGGCACCG	NA	NA	NA	NA	NA	NA	NA	NA	85672683	85650357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_85650569_85650656_85650743_85651903_85651972_85652037_85652171_85652280_85652376_85655208_85655419_85655578_85655655_85655850_85656012_85657448_85657528_85661872_85661949_85662334_85662424_85664169_85664202_85672635
ENSMUSG00000053693.17_85650358_85672683_6	chr8	-	1374	12	NNC	ENSMUSG00000053693.17	novel	1372	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCATCTTTGGGCACCG	NA	NA	NA	NA	NA	NA	NA	NA	85672683	85650357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_85650569_85650656_85650743_85651903_85651972_85652037_85652171_85652273_85652376_85655208_85655419_85655578_85655655_85655850_85656012_85657448_85657528_85661872_85661949_85662334_85662424_85672600
ENSMUSG00000053693.17_85650358_85672683_7	chr8	-	1362	12	NNC	ENSMUSG00000053693.17	novel	1372	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCATCTTTGGGCACCG	NA	NA	NA	NA	NA	NA	NA	NA	85672683	85650357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_85650569_85650656_85650743_85651903_85651972_85652037_85652171_85652273_85652376_85655208_85655419_85655578_85655655_85655850_85656012_85657448_85657528_85661872_85661949_85662334_85662424_85672612
ENSMUSG00000053693.17_85650358_85672683_8	chr8	-	1371	13	FSM	ENSMUSG00000053693.17	ENST00000591495.5	1372	13	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCATCTTTGGGCACCG	NA	NA	NA	NA	NA	NA	NA	NA	85672683	85650357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85650569_85650656_85650743_85651903_85651972_85652037_85652171_85652273_85652376_85655208_85655419_85655578_85655655_85655850_85656012_85657448_85657528_85661872_85661949_85662334_85662424_85664169_85664202_85672635
ENSMUSG00000053693.17_85650358_85672683_9	chr8	-	1361	13	NNC	ENSMUSG00000053693.17	novel	1372	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCATCTTTGGGCACCG	NA	NA	NA	NA	NA	NA	NA	NA	85672683	85650357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_85650569_85650666_85650743_85651903_85651972_85652037_85652171_85652273_85652376_85655208_85655419_85655578_85655655_85655850_85656012_85657448_85657528_85661872_85661949_85662334_85662424_85664169_85664202_85672635
ENSMUSG00000053730.16_129570392_129585898_1	chr4	-	994	5	ISM	ENSMUSG00000053730.16	ENSMUST00000102588.10	1810	9	4733	244	4733	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGAGGGACCTGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	129585898	129570391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129570602_129572364_129572486_129578104_129578293_129580563_129580901_129585760
ENSMUSG00000053746.9_32666393_32667298_1	chr2	+	397	3	NNC	ENSMUSG00000053746.9	novel	485	3	NA	NA	78	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTCAGGCCTCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	32666392	32667298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32666536_32666718_32666819_32667144
ENSMUSG00000053746.9_32666393_32667298_2	chr2	+	408	3	FSM	ENSMUSG00000053746.9	ENST00000423807.5	485	3	78	-1	78	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTCAGGCCTCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	32666392	32667298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32666536_32666718_32666819_32667133
ENSMUSG00000053746.9_32666393_32667298_3	chr2	+	403	3	NNC	ENSMUSG00000053746.9	novel	485	3	NA	NA	78	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTCAGGCCTCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	32666392	32667298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_32666536_32666723_32666819_32667133
ENSMUSG00000053754.15_52436088_52442084_1	chr14	-	1431	6	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	32945	480	32945	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCAACTCAGACTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	52442084	52436087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889
ENSMUSG00000053754.15_52436286_52442428_1	chr14	-	1372	7	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	32601	678	32601	-350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACCATCACCATCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	52442428	52436285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246
ENSMUSG00000053754.15_52436405_52442497_1	chr14	-	1322	7	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	32532	797	32532	-469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTACCACTTCTGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	52442497	52436404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246
ENSMUSG00000053754.15_52439162_52442807_1	chr14	-	1353	6	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	32222	3554	32222	-3226	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATAAGGCAGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	52442807	52439161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246
ENSMUSG00000053754.15_52439619_52442963_1	chr14	-	1448	5	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	32066	4011	32066	-3683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCCCGATTTCTAGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	52442963	52439618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246
ENSMUSG00000053754.15_52439748_52443096_1	chr14	-	1363	6	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	31933	4140	31933	-3812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATCTGGACCTGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	52443096	52439747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052
ENSMUSG00000053754.15_52441387_52444365_1	chr14	-	1386	5	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	30664	5779	30664	-5451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAACTTCGGCGAGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	52444365	52441386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307
ENSMUSG00000053754.15_52441453_52444418_1	chr14	-	1373	5	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	30611	5845	30611	-5517	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCAGTGCAGCTTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	52444418	52441452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307
ENSMUSG00000053754.15_52441517_52444475_1	chr14	-	1366	5	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	30554	5909	30554	-5581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACAGTCCCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	52444475	52441516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307
ENSMUSG00000053754.15_52442546_52450099_1	chr14	-	1370	9	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	24930	6938	24930	-6610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTCACCTGAGGAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	52450099	52442545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019
ENSMUSG00000053754.15_52442758_52450480_1	chr14	-	1435	10	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	24549	7150	24549	-6822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCAGCCCGCCATGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	52450480	52442757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450177_52450280
ENSMUSG00000053754.15_52442880_52450766_1	chr14	-	1370	11	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	24263	7272	24263	-6944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTACGGGAACAAGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	52450766	52442879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450177_52450280_52450481_52450709
ENSMUSG00000053754.15_52443198_52451693_1	chr14	-	1305	11	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	23336	7590	23336	-7262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGACAACATGCAGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	52451693	52443197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450177_52450280_52450481_52450709_52450907_52451669
ENSMUSG00000053754.15_52444422_52452073_1	chr14	-	1362	11	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	22956	8814	22956	-8486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTACAAGAGAGAACAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	52452073	52444421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450177_52450280_52450481_52450709_52450907_52451669_52451781_52451925
ENSMUSG00000053754.15_52447986_52453436_1	chr14	-	1391	10	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	21593	12378	21593	-12050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACATAGAGTGTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	52453436	52447985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52448073_52449272_52449377_52449853_52449944_52450019_52450177_52450280_52450481_52450709_52450907_52451669_52451781_52451925_52452106_52452629_52452798_52453339
ENSMUSG00000053754.15_52450026_52453881_1	chr14	-	1386	8	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	21148	14418	21148	-14090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAGTAAGAATGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	52453881	52450025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52450177_52450280_52450481_52450709_52450907_52451669_52451781_52451925_52452106_52452629_52452798_52453339_52453536_52453698
ENSMUSG00000053754.15_52450391_52455410_1	chr14	-	1391	8	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	19619	14783	19619	-14455	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTACTGTCTTCTACACT	NA	NA	NA	NA	NA	NA	NA	NA	52455410	52450390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52450481_52450709_52450907_52451669_52451781_52451925_52452106_52452629_52452798_52453339_52453536_52453698_52453910_52455172
ENSMUSG00000053754.15_52451975_52458451_1	chr14	-	1364	8	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	16578	16367	16578	-16039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAACCATCACTATTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	52458451	52451974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52452106_52452629_52452798_52453339_52453536_52453698_52453910_52455172_52455429_52455629_52455774_52457053_52457231_52458370
ENSMUSG00000053754.15_52452728_52458849_1	chr14	-	1388	8	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	16180	17120	16180	-16792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGAGAGAGAGATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	52458849	52452727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52452798_52453339_52453536_52453698_52453910_52455172_52455429_52455629_52455774_52457053_52457231_52458370_52458615_52458759
ENSMUSG00000053754.15_52453409_52460034_1	chr14	-	1377	8	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	14995	17801	14995	-17473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATCTTACAGCTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	52460034	52453408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52453536_52453698_52453910_52455172_52455429_52455629_52455774_52457053_52457231_52458370_52458615_52458759_52458882_52459938
ENSMUSG00000053754.15_52453857_52464118_1	chr14	-	1385	10	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	10911	18249	10911	-17921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATTTCCACCTGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	52464118	52453856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52453910_52455172_52455429_52455629_52455774_52457053_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069
ENSMUSG00000053754.15_52455315_52465054_1	chr14	-	1366	11	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	9975	19707	9975	-19379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCCAGAAGAAATACTACAG	NA	NA	NA	NA	NA	NA	NA	NA	52465054	52455314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52455429_52455629_52455774_52457053_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954
ENSMUSG00000053754.15_52455702_52468987_1	chr14	-	1356	11	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	6042	20094	6042	-19766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAACCTTCTCAGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	52468987	52455701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52455774_52457053_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894
ENSMUSG00000053754.15_52457053_52470077_1	chr14	-	1383	11	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	4952	21445	4952	-21117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTCCTAAGATGACTT	NA	NA	NA	NA	NA	NA	NA	NA	52470077	52457052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001
ENSMUSG00000053754.15_52457178_52470206_1	chr14	-	1387	11	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	4823	21570	4823	-21242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTTTGTCAGACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	52470206	52457177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001
ENSMUSG00000053754.15_52458467_52470347_1	chr14	-	1379	10	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	4682	22859	4682	-22531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACATGGACAGAGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	52470347	52458466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001
ENSMUSG00000053754.15_52458795_52472717_1	chr14	-	1373	10	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	2312	23187	2312	-22859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCAACTGGCTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	52472717	52458794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001_52470388_52472580
ENSMUSG00000053754.15_52463548_52474308_1	chr14	-	1374	8	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	721	27940	721	-27612	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTAAAACGGTTCAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	52474308	52463547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186
ENSMUSG00000053754.15_52464971_52474560_1	chr14	-	1420	5	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	469	29363	469	-29035	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCAGTTCTTTGTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	52474560	52464970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186
ENSMUSG00000053754.15_52468964_52474730_1	chr14	-	1354	4	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	299	33356	299	-33028	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGACAACTCTGACGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	52474730	52468963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52469010_52470001_52470388_52472580_52472959_52474186
ENSMUSG00000053754.15_52470110_52474905_1	chr14	-	1375	3	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	124	34502	124	-34174	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAGAAACGCAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	52474905	52470109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52470388_52472580_52472959_52474186
ENSMUSG00000053754.15_52470243_52475041_1	chr14	-	1378	3	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	-12	34635	-12	-34307	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCAGAAAAAGCAAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	52475041	52470242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52470388_52472580_52472959_52474186
ENSMUSG00000053754.15_52470301_52475102_1	chr14	-	1381	3	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	-73	34693	-73	-34365	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGCCCCTCATACTGC	NA	NA	NA	NA	NA	NA	NA	NA	52475102	52470300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52470388_52472580_52472959_52474186
ENSMUSG00000053754.15_52472607_52475229_1	chr14	-	1395	2	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	-200	36999	-200	-36671	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCAAGATGGTGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	52475229	52472606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52472959_52474186
ENSMUSG00000053768.14_32769152_33026359_1	chr6	-	1289	7	ISM	ENSMUSG00000053768.14	ENSMUST00000066379.11	1550	8	10836	0	10745	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGACTAAGACTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	33026359	32769151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271
ENSMUSG00000053768.14_32769152_33026360_1	chr6	-	1284	7	NNC	ENSMUSG00000053768.14	novel	1550	8	NA	NA	10744	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGACTAAGACTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	33026360	32769151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_32769862_32780824_32780961_32829085_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271
ENSMUSG00000053768.14_32769152_33037050_1	chr6	-	1405	8	FSM	ENSMUSG00000053768.14	ENSMUST00000066379.11	1550	8	145	0	54	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGACTAAGACTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	33037050	32769151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ENSMUSG00000053768.14_32769263_33037050_1	chr6	-	1294	8	FSM	ENSMUSG00000053768.14	ENSMUST00000066379.11	1550	8	145	111	54	-111	multi-exon	FALSE	canonical	NA	NA	NA	NA	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGCATTTTTGTCAATAT	NA	NA	NA	NA	NA	NA	NA	NA	33037050	32769262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ENSMUSG00000053768.14_32769263_33037152_1	chr6	-	1396	8	FSM	ENSMUSG00000053768.14	ENSMUST00000066379.11	1550	8	43	111	0	-111	multi-exon	FALSE	canonical	NA	NA	NA	NA	2239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGCATTTTTGTCAATAT	NA	NA	NA	NA	NA	NA	NA	NA	33037152	32769262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ENSMUSG00000053768.14_32769629_32985478_1	chr6	-	712	6	ISM	ENSMUSG00000053768.14	ENST00000448878.6	1009	8	51626	18	51626	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTGTTAATGAAACCAC	NA	NA	NA	NA	NA	NA	NA	NA	32985478	32769628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945126_32945254_32985417
ENSMUSG00000053768.14_32769790_33026321_1	chr6	-	622	7	ISM	ENSMUSG00000053768.14	ENST00000448878.6	1009	8	10783	179	10783	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTTTTCTTTTCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	33026321	32769789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945126_32945254_32985417_32985500_33026271
ENSMUSG00000053768.14_32780923_33037050_1	chr6	-	606	7	ISM	ENSMUSG00000053768.14	ENST00000448878.6	1009	8	54	11312	54	-11312	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATCCTCCAGTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	33037050	32780922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_32780961_32829079_32829151_32869226_32869311_32945126_32945254_32985417_32985500_33026271_33026360_33036934
ENSMUSG00000053768.14_32828584_32945215_1	chr6	-	731	3	ISM	ENSMUSG00000053768.14	ENSMUST00000115091.2	1363	6	91937	206	91889	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTACCGCCAGTTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	32945215	32828583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_32829151_32869226_32869311_32945135
ENSMUSG00000053768.14_32829079_33037152_1	chr6	-	671	6	ISM	ENSMUSG00000053768.14	ENST00000448878.6	1009	8	-48	59468	0	-701	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTCACCCTGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	33037152	32829078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_32829151_32869226_32869311_32945126_32945254_32985417_32985500_33026271_33026360_33036934
ENSMUSG00000053797.11_100136917_100138303_1	chr11	-	798	4	ISM	ENSMUSG00000053797.11	ENST00000301653.9	1589	7	1447	0	-645	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGATGTCTATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	100138303	100136916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100137204_100137435_100137657_100137927_100138054_100138139
ENSMUSG00000053797.11_100137023_100138491_1	chr11	-	794	5	ISM	ENSMUSG00000053797.11	ENST00000301653.9	1589	7	1259	106	-833	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGAGGGCTTGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	100138491	100137022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100137204_100137435_100137657_100137927_100138054_100138139_100138302_100138387
ENSMUSG00000053797.11_100137109_100137498_1	chr11	-	296	2	FSM	ENSMUSG00000053797.11	ENST00000584759.1	648	2	160	192	160	-192	multi-exon	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTCAACCAGCTTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	100137498	100137108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100137342_100137435
ENSMUSG00000053797.11_100137170_100137540_1	chr11	-	277	2	FSM	ENSMUSG00000053797.11	ENST00000584759.1	648	2	118	253	118	-253	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTTTTGCAGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	100137540	100137169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100137342_100137435
ENSMUSG00000053797.11_100137208_100137616_1	chr11	-	315	2	FSM	ENSMUSG00000053797.11	ENST00000584759.1	648	2	42	291	42	236	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTTGCTTAGCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	100137616	100137207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100137342_100137435
ENSMUSG00000053797.11_100137436_100139311_1	chr11	-	863	6	ISM	ENSMUSG00000053797.11	ENSMUST00000007280.9	1565	8	417	519	400	8	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTGACCCTGAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	100139311	100137435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100137657_100137927_100138054_100138139_100138302_100138387_100138545_100138682_100138766_100139197
ENSMUSG00000053797.11_100137928_100139397_1	chr11	-	728	5	FSM	ENSMUSG00000053797.11	ENST00000580621.5	1526	5	314	484	314	-484	multi-exon	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAAGAAGGGGCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	100139397	100137927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100138054_100138139_100138302_100138387_100138545_100138682_100138766_100139197
ENSMUSG00000053797.11_100138140_100139553_1	chr11	-	758	4	ISM	ENSMUSG00000053797.11	ENST00000580621.5	1526	5	158	696	158	-696	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGGCCCGCTTCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	100139553	100138139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100138302_100138387_100138545_100138682_100138766_100139197
ENSMUSG00000053797.11_100138199_100139597_1	chr11	-	743	4	ISM	ENSMUSG00000053797.11	ENST00000580621.5	1526	5	114	755	114	-755	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGAGCAGATGGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	100139597	100138198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100138302_100138387_100138545_100138682_100138766_100139197
ENSMUSG00000053797.11_100138228_100139728_1	chr11	-	845	4	ISM	ENSMUSG00000053797.11	ENST00000580621.5	1526	5	-17	784	0	-784	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCGCATTCTGAATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	100139728	100138227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100138302_100138387_100138545_100138682_100138766_100139197
ENSMUSG00000053801.19_45474647_45476763_1	chr7	-	1070	2	ISM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	3450	-4	3450	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCTGAGCTTCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	45476763	45474646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45475518_45476564
ENSMUSG00000053801.19_45474801_45477077_1	chr7	-	1043	3	ISM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	3136	150	3136	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTGCCTTCTGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	45477077	45474800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45475518_45476564_45476763_45476949
ENSMUSG00000053801.19_45474970_45477348_1	chr7	-	1034	4	ISM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	2865	319	2865	-319	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGATACGGCCTCAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	45477348	45474969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203
ENSMUSG00000053801.19_45475205_45479535_1	chr7	-	998	5	ISM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	678	554	678	-554	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGGTGGCCAACACTTG	NA	NA	NA	NA	NA	NA	NA	NA	45479535	45475204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405
ENSMUSG00000053801.19_45475256_45479733_1	chr7	-	998	6	ISM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	480	605	480	-605	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATCAGCACCGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	45479733	45475255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45479715
ENSMUSG00000053801.19_45475311_45479804_1	chr7	-	1014	6	ISM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	409	660	409	-660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAAGGTGAGACTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	45479804	45475310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45479715
ENSMUSG00000053801.19_45476989_45480100_1	chr7	-	681	5	ISM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	113	2338	113	-2338	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGAGGATCTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	45480100	45476988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45477093_45477203_45477418_45479405_45479569_45479715_45479834_45480018
ENSMUSG00000053801.19_45477203_45480368_1	chr7	-	763	5	ISM	ENSMUSG00000053801.19	ENSMUST00000131384.3	1974	8	0	2556	0	-2552	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGGATTTTCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	45480368	45477202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45477418_45479405_45479569_45479715_45479834_45480018_45480214_45480296
ENSMUSG00000053825.16_106306207_106655322_1	chr10	+	1136	8	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	-1	109666	0	-109666	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGTGGGAGAGGTGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	106306206	106655322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106306453_106310492_106310744_106393106_106393161_106579347_106579450_106597843_106598009_106603334_106603410_106636597_106636715_106655196
ENSMUSG00000053825.16_106306362_106664797_1	chr10	+	1125	9	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	154	100191	154	-100191	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGTTACCTGAGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	106306361	106664797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106306453_106310492_106310744_106393106_106393161_106579347_106579450_106597843_106598009_106603334_106603410_106636597_106636715_106655196_106655419_106664749
ENSMUSG00000053825.16_106306425_106664853_1	chr10	+	1118	9	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	217	100135	217	-100135	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAGAAAATGAATTGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	106306424	106664853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106306453_106310492_106310744_106393106_106393161_106579347_106579450_106597843_106598009_106603334_106603410_106636597_106636715_106655196_106655419_106664749
ENSMUSG00000053825.16_106310567_106666486_1	chr10	+	1119	9	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	4359	98502	4359	-98502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGACCATGAGAAAAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	106310566	106666486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106310744_106393106_106393161_106579347_106579450_106597843_106598009_106603334_106603410_106636597_106636715_106655196_106655419_106664749_106664897_106666426
ENSMUSG00000053825.16_106310676_106671590_1	chr10	+	1119	10	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	4468	93398	4468	-93398	internal_fragment	TRUE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACACCTCGAGGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	106310675	106671590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106310744_106393106_106393161_106579347_106579450_106597843_106598009_106603334_106603410_106636597_106636715_106655196_106655419_106664749_106664897_106666426_106666562_106671556
ENSMUSG00000053825.16_106579347_106672044_1	chr10	+	1180	9	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	273139	92944	-91991	-92944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGTCTCACACAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	106579346	106672044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106579450_106597843_106598009_106603334_106603410_106636597_106636715_106655196_106655419_106664749_106664897_106666426_106666562_106671556_106671641_106671912
ENSMUSG00000053825.16_106655351_106694073_1	chr10	+	1130	10	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	349143	70915	-15987	-70915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAGTGGCTAGTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	106655350	106694073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106655419_106664749_106664897_106666426_106666562_106671556_106671641_106671912_106672045_106673141_106673205_106678546_106678639_106690797_106690934_106693269_106693491_106694021
ENSMUSG00000053825.16_106666494_106699175_1	chr10	+	1125	10	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	360286	65813	-4844	-65813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCCCAACACCCAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	106666493	106699175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106666562_106671556_106671641_106671912_106672045_106673141_106673205_106678546_106678639_106690797_106690934_106693269_106693491_106694021_106694260_106695637_106695668_106699114
ENSMUSG00000053825.16_106666544_106699231_1	chr10	+	1131	10	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	360336	65757	-4794	-65757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATGCCCGGAGGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	106666543	106699231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106666562_106671556_106671641_106671912_106672045_106673141_106673205_106678546_106678639_106690797_106690934_106693269_106693491_106694021_106694260_106695637_106695668_106699114
ENSMUSG00000053825.16_106671399_106767341_1	chr10	+	2781	20	FSM	ENSMUSG00000053825.16	ENST00000541570.6	2975	20	61	133	61	-133	multi-exon	FALSE	canonical	NA	NA	NA	NA	1880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATTTTTTAAAAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	106671398	106767341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_106671466_106671556_106671641_106671912_106672045_106673141_106673205_106678546_106678639_106690797_106690934_106693269_106693491_106694021_106694260_106695637_106695668_106699114_106699246_106701107_106701263_106705739_106705834_106729292_106729375_106732178_106732380_106742226_106742421_106743573_106743672_106749425_106749602_106751541_106751611_106763563_106763724_106766983
ENSMUSG00000053825.16_106671557_106767474_1	chr10	+	2847	19	ISM	ENSMUSG00000053825.16	ENST00000541570.6	2975	20	219	0	219	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAGAAGTGTGTTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	106671556	106767474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106671641_106671912_106672045_106673141_106673205_106678546_106678639_106690797_106690934_106693269_106693491_106694021_106694260_106695637_106695668_106699114_106699246_106701107_106701263_106705739_106705834_106729292_106729375_106732178_106732380_106742226_106742421_106743573_106743672_106749425_106749602_106751541_106751611_106763563_106763724_106766983
ENSMUSG00000053825.16_106701106_106751610_1	chr10	+	1164	10	ISM	ENSMUSG00000053825.16	ENSMUST00000029404.17	5429	32	394906	16743	29768	-13378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTCTTACCTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	106701105	106751610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106701263_106705739_106705834_106729292_106729375_106732178_106732380_106739503_106739567_106740677_106740708_106742226_106742421_106743573_106743672_106749425_106749602_106751541
ENSMUSG00000053825.16_106701163_106742354_1	chr10	+	680	7	ISM	ENSMUSG00000053825.16	ENST00000548586.5	4030	31	394961	22640	29825	-22634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTTAGACCACCTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	106701162	106742354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106701263_106705739_106705834_106729292_106729375_106732178_106732380_106739503_106739567_106740677_106740708_106742244
ENSMUSG00000053825.16_106705740_106763723_1	chr10	+	1167	10	ISM	ENSMUSG00000053825.16	ENSMUST00000029404.17	5429	32	399540	4630	34402	-1265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGTAGTTTTACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	106705739	106763723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106705834_106729292_106729375_106732178_106732380_106739503_106739567_106740677_106740708_106742226_106742421_106743573_106743672_106749425_106749602_106751541_106751611_106763563
ENSMUSG00000053825.16_106729336_106767059_1	chr10	+	1106	10	ISM	ENSMUSG00000053825.16	ENST00000550584.6	5385	31	423174	1301	57998	-415	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATCCTAAGGGAATAATA	NA	NA	NA	NA	NA	NA	NA	NA	106729335	106767059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106729375_106732178_106732380_106739503_106739567_106740677_106740708_106742226_106742421_106743573_106743672_106749425_106749602_106751541_106751611_106763563_106763724_106766983
ENSMUSG00000053825.16_106732222_106742295_1	chr10	+	257	3	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	426014	22693	60884	-22693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTGGGGTTACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	106732221	106742295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106732380_106740677_106740708_106742226
ENSMUSG00000053825.16_106732269_106767223_1	chr10	+	1141	9	ISM	ENSMUSG00000053825.16	ENST00000550584.6	5385	31	426107	1137	60931	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTATGAGATGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	106732268	106767223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106732380_106739503_106739567_106740677_106740708_106742226_106742421_106743573_106743672_106749425_106749602_106751541_106751611_106763563_106763724_106766983
ENSMUSG00000053825.16_106732278_106742346_1	chr10	+	252	3	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	426070	22642	60940	-22642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCAAGAATGTTAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	106732277	106742346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106732380_106740677_106740708_106742226
ENSMUSG00000053825.16_106732345_106742407_1	chr10	+	246	3	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	426137	22581	61007	-22581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTTCCATCGGTAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	106732344	106742407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106732380_106740677_106740708_106742226
ENSMUSG00000053825.16_106742316_106764987_1	chr10	+	681	6	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	436108	1	70978	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCAGCACTGACCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	106742315	106764987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106742421_106743573_106743672_106749425_106749602_106751541_106751611_106763563_106763724_106764914
ENSMUSG00000053825.16_106743595_106767659_1	chr10	+	1158	5	ISM	ENSMUSG00000053825.16	ENST00000541570.6	2975	20	72257	-185	72257	185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAACAAAGCCAAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	106743594	106767659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106743672_106749425_106749602_106751541_106751611_106763563_106763724_106766983
ENSMUSG00000053825.16_106749500_106767851_1	chr10	+	1199	4	ISM	ENSMUSG00000053825.16	ENST00000541570.6	2975	20	78162	-377	78162	377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGTAGAGTCTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	106749499	106767851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106749602_106751541_106751611_106763563_106763724_106766983
ENSMUSG00000053825.16_106763587_106768010_1	chr10	+	1164	2	ISM	ENSMUSG00000053825.16	ENST00000541570.6	2975	20	92249	-536	92249	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTGAATTCACTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	106763586	106768010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106763724_106766983
ENSMUSG00000053825.16_106763659_106768040_1	chr10	+	1122	2	ISM	ENSMUSG00000053825.16	ENST00000541570.6	2975	20	92321	-566	92321	-313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGACAGAATGATTAACAT	NA	NA	NA	NA	NA	NA	NA	NA	106763658	106768040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_106763724_106766983
ENSMUSG00000053838.15_6056315_6075561_1	chr11	-	2374	3	ISM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	74854	624	74854	-624	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGCATGTTGTAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	6075561	6056314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6058356_6063242_6063432_6075417
ENSMUSG00000053838.15_6056458_6100590_1	chr11	-	2327	4	ISM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	49825	767	49825	-767	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGTAGCATGGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	6100590	6056457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494
ENSMUSG00000053838.15_6056742_6143319_1	chr11	-	2246	5	ISM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	7096	1051	7096	-1051	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGAGGTCACCGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	6143319	6056741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153
ENSMUSG00000053838.15_6056798_6143476_1	chr11	-	2347	5	ISM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	6939	1107	6939	-1107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCCAGAGTCTGAACATG	NA	NA	NA	NA	NA	NA	NA	NA	6143476	6056797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153
ENSMUSG00000053838.15_6056844_6143476_1	chr11	-	2301	5	ISM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	6939	1153	6939	-1153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGACCATGATGGTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	6143476	6056843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153
ENSMUSG00000053838.15_6057020_6150078_1	chr11	-	2261	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	337	1329	337	-1329	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAGAGCCCTGCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	6150078	6057019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ENSMUSG00000053838.15_6057221_6150274_1	chr11	-	2256	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	141	1530	141	-1530	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCAGGACCCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	6150274	6057220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ENSMUSG00000053838.15_6057282_6150415_1	chr11	-	2336	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	0	1591	0	-1591	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTTTGGAGCTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	6150415	6057281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ENSMUSG00000053841.16_129521316_129525926_1	chr4	-	2104	6	ISM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	8672	1440	8672	-1440	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATTTTGCTTCTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	129525926	129521315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882
ENSMUSG00000053841.16_129521385_129525982_1	chr4	-	2091	6	ISM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	8616	1509	8616	-1509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACAACAGCTTTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	129525982	129521384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882
ENSMUSG00000053841.16_129521440_129526055_1	chr4	-	2109	6	ISM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	8543	1564	8543	-1564	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGGCTCTGCTGAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	129526055	129521439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882
ENSMUSG00000053841.16_129521816_129533090_1	chr4	-	2087	9	ISM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	1508	1940	1508	-1940	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGATATTTCAGAGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	129533090	129521815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021
ENSMUSG00000053841.16_129521980_129533261_1	chr4	-	2094	9	ISM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	1337	2104	1337	-2104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGCTTGTTTTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	129533261	129521979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021
ENSMUSG00000053841.16_129522172_129534136_1	chr4	-	2089	10	FSM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	462	2296	462	-2296	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCTTTGTGGGGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	129534136	129522171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048
ENSMUSG00000053886.5_68734959_68799567_1	chr8	+	1092	7	FSM	ENSMUSG00000053886.5	ENST00000265807.8	1174	7	82	0	82	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAAGGGGGTGTTACCTC	NA	NA	NA	NA	NA	NA	NA	NA	68734958	68799567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_68735064_68746954_68747047_68781933_68782013_68783686_68783889_68787716_68787848_68798604_68798826_68799305
ENSMUSG00000053897.16_135531747_135532377_1	chr3	+	401	2	ISM	ENSMUSG00000053897.16	ENST00000682227.1	3096	9	27	61762	27	-61762	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCCTGCTGGAGCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	135531746	135532377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135531771_135532000
ENSMUSG00000053897.16_135532235_135561692_1	chr3	+	408	3	ISM	ENSMUSG00000053897.16	ENSMUST00000029810.6	3203	8	384	32455	384	-32447	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATCAATCTGGCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	135532234	135561692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135532452_135554776_135554940_135561664
ENSMUSG00000053897.16_135532280_135561748_1	chr3	+	419	3	ISM	ENSMUSG00000053897.16	ENSMUST00000029810.6	3203	8	429	32399	429	-32391	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTCCCCAAGATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	135532279	135561748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135532452_135554776_135554940_135561664
ENSMUSG00000053897.16_135532332_135561817_1	chr3	+	436	3	ISM	ENSMUSG00000053897.16	ENSMUST00000029810.6	3203	8	481	32330	481	-32322	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCTTATTCCAGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	135532331	135561817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135532452_135554776_135554940_135561664
ENSMUSG00000053897.16_135532387_135563270_1	chr3	+	425	4	ISM	ENSMUSG00000053897.16	ENSMUST00000029810.6	3203	8	536	30877	536	-30869	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTACGTTGAGAAAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	135532386	135563270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135532452_135554776_135554940_135561664_135561835_135563243
ENSMUSG00000053897.16_135554874_135563888_1	chr3	+	416	4	ISM	ENSMUSG00000053897.16	ENSMUST00000029810.6	3203	8	23023	30259	23023	-30251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAACGTTACCATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	135554873	135563888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135554940_135561664_135561835_135563243_135563367_135563831
ENSMUSG00000053897.16_135561769_135590005_1	chr3	+	408	4	ISM	ENSMUSG00000053897.16	ENSMUST00000029810.6	3203	8	29918	4142	29918	-4134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTCAGAAATAGGAACAAT	NA	NA	NA	NA	NA	NA	NA	NA	135561768	135590005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135561835_135563243_135563367_135563831_135564003_135589957
ENSMUSG00000053897.16_135561811_135590070_1	chr3	+	431	4	ISM	ENSMUSG00000053897.16	ENSMUST00000029810.6	3203	8	29960	4077	29960	-4069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTTGGCGATTGGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	135561810	135590070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135561835_135563243_135563367_135563831_135564003_135589957
ENSMUSG00000053897.16_135563860_135590441_1	chr3	+	430	3	ISM	ENSMUSG00000053897.16	ENSMUST00000029810.6	3203	8	32009	3706	32009	-3698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGTGGGACTAGCTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	135563859	135590441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135564003_135589957_135590166_135590362
ENSMUSG00000053897.16_135563927_135590481_1	chr3	+	403	3	ISM	ENSMUSG00000053897.16	ENSMUST00000029810.6	3203	8	32076	3666	32076	-3658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTCCCAATATTATATT	NA	NA	NA	NA	NA	NA	NA	NA	135563926	135590481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135564003_135589957_135590166_135590362
ENSMUSG00000053898.13_28524642_28530885_1	chr7	+	872	8	ISM	ENSMUSG00000053898.13	ENSMUST00000066264.13	1267	10	0	787	0	-787	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGCCCTGATTGGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	28524641	28530885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28524838_28525298_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813
ENSMUSG00000053898.13_28524774_28531292_1	chr7	+	891	9	ISM	ENSMUSG00000053898.13	ENSMUST00000066264.13	1267	10	132	380	132	-380	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	920	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCCCTGCCTACACCA	NA	NA	NA	NA	NA	NA	NA	NA	28524773	28531292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28524838_28525298_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813_28530886_28531141
ENSMUSG00000053898.13_28525383_28531479_1	chr7	+	794	9	ISM	ENSMUSG00000053898.13	ENSMUST00000066264.13	1267	10	741	193	741	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCAGCCATGGAGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	28525382	28531479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813_28530886_28531141_28531293_28531428
ENSMUSG00000053898.13_28525383_28531532_1	chr7	+	847	9	ISM	ENSMUSG00000053898.13	ENSMUST00000066264.13	1267	10	741	140	741	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTTCCGGACCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	28525382	28531532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813_28530886_28531141_28531293_28531428
ENSMUSG00000053898.13_28525383_28531534_1	chr7	+	844	9	NNC	ENSMUSG00000053898.13	novel	1267	10	NA	NA	741	-138	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCCGGACCCTGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	28525382	28531534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813_28530881_28531141_28531293_28531428
ENSMUSG00000053907.11_72411048_72412005_1	chr6	-	373	2	ISM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	4536	1266	18	228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTGAGCCATGTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	72412005	72411047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72411379_72411963
ENSMUSG00000053907.11_72411104_72412059_1	chr6	-	371	2	ISM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	4482	1322	-36	172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGCTATTCTGTCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	72412059	72411103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72411379_72411963
ENSMUSG00000053907.11_72411162_72412099_1	chr6	-	353	2	ISM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	4442	1380	-76	114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCAGTCACTCTAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	72412099	72411161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72411379_72411963
ENSMUSG00000053907.11_72411274_72411974_1	chr6	-	111	2	FSM	ENSMUSG00000053907.11	ENST00000477975.2	158	2	49	-2	49	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGCCTTTTTTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	72411974	72411273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_72411379_72411968
ENSMUSG00000053907.11_72411274_72412371_1	chr6	-	422	3	ISM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	4170	1492	-348	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGCCTTTTTTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	72412371	72411273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72411379_72411963_72412098_72412188
ENSMUSG00000053907.11_72411350_72412815_1	chr6	-	368	4	ISM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	3726	1568	-792	-74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGACTGCAGCCTATGGC	NA	NA	NA	NA	NA	NA	NA	NA	72412815	72411349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793
ENSMUSG00000053907.11_72413260_72414431_1	chr6	-	378	4	ISM	ENSMUSG00000053907.11	ENSMUST00000206692.2	1400	9	2108	1732	2108	-1732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACAAGCTAAATGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	72414431	72413259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72413324_72413399_72413513_72413977_72414101_72414353
ENSMUSG00000053907.11_72413977_72416523_1	chr6	-	397	3	ISM	ENSMUSG00000053907.11	ENSMUST00000206692.2	1400	9	16	2449	16	-2449	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTAAAGATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	72416523	72413976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72414101_72414353_72414432_72416328
ENSMUSG00000053916.5_150872132_150881282_1	chr2	-	831	2	FSM	ENSMUSG00000053916.5	ENSMUST00000066640.5	1394	2	36	527	36	-527	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAGGGAAGCTAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	150881282	150872131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_150872837_150881156
ENSMUSG00000053916.5_150872194_150881305_1	chr2	-	792	2	FSM	ENSMUSG00000053916.5	ENSMUST00000066640.5	1394	2	13	589	13	-589	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTCTGTGTAAATACAG	NA	NA	NA	NA	NA	NA	NA	NA	150881305	150872193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_150872837_150881156
ENSMUSG00000053929.18_76529662_76533249_1	chr15	-	1434	3	ISM	ENSMUSG00000053929.18	ENST00000530374.6	2139	4	7872	13	7667	-13	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTCCAGGAAAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	76533249	76529661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76530775_76532298_76532511_76533140
ENSMUSG00000053929.18_76529874_76540659_1	chr15	-	1452	4	FSM	ENSMUSG00000053929.18	ENST00000530374.6	2139	4	462	225	257	-225	multi-exon	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATACCGCACCTATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	76540659	76529873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76530775_76532298_76532511_76533140_76533380_76540559
ENSMUSG00000053929.18_76529961_76540737_1	chr15	-	1443	4	FSM	ENSMUSG00000053929.18	ENST00000530374.6	2139	4	384	312	179	-312	multi-exon	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTGGAGGGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	76540737	76529960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76530775_76532298_76532511_76533140_76533380_76540559
ENSMUSG00000053929.18_76529961_76540916_1	chr15	-	1622	4	FSM	ENSMUSG00000053929.18	ENST00000530374.6	2139	4	205	312	0	-312	multi-exon	FALSE	canonical	NA	NA	NA	NA	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTGGAGGGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	76540916	76529960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76530775_76532298_76532511_76533140_76533380_76540559
ENSMUSG00000053929.18_76542519_76544261_1	chr15	-	875	3	FSM	ENSMUSG00000053929.18	ENSMUST00000177359.2	1110	3	56	179	0	-179	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCTGTTATAATTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	76544261	76542518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76543066_76543418_76543640_76544154
ENSMUSG00000053929.18_76542572_76544269_1	chr15	-	830	3	FSM	ENSMUSG00000053929.18	ENSMUST00000177359.2	1110	3	48	232	-8	-232	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTGGGGCTTCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	76544269	76542571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76543066_76543418_76543640_76544154
ENSMUSG00000053931.12_121220419_121245083_1	chr3	+	300	4	ISM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	273	6773	0	-6377	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATGATATATTTGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	121220418	121245083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031
ENSMUSG00000053931.12_121243665_121245577_1	chr3	+	306	4	ISM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	23519	6279	23246	-5883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	935	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGCAGAAAAACAAACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	121243664	121245577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_121243720_121243940_121244008_121245031_121245170_121245531
ENSMUSG00000053931.12_121243977_121248642_1	chr3	+	333	4	ISM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	23831	3214	23558	-2818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCGGAGGCATCTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	121243976	121248642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_121244008_121245031_121245170_121245531_121245649_121248595
ENSMUSG00000053931.12_121245083_121248679_1	chr3	+	283	3	NNC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	24664	-2781	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAACCCTTTGACCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	121245082	121248679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_121245165_121245531_121245649_121248595
ENSMUSG00000053931.12_121245156_121250792_1	chr3	+	340	4	ISM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	25010	1064	24737	-668	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGACAACTCGACCATTT	NA	NA	NA	NA	NA	NA	NA	NA	121245155	121250792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_121245170_121245531_121245649_121248595_121248743_121250730
ENSMUSG00000053931.12_121245526_121250792_1	chr3	+	332	3	ISM	ENSMUSG00000053931.12	ENSMUST00000197135.5	1242	6	25107	668	25107	-668	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGACAACTCGACCATTT	NA	NA	NA	NA	NA	NA	NA	NA	121245525	121250792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_121245649_121248595_121248743_121250730
ENSMUSG00000054008.10_60821919_60823053_1	chr18	-	536	2	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	23408	2869	23408	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGCTGCCATAGTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	60823053	60821918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60822437_60823035
ENSMUSG00000054008.10_60822043_60824278_1	chr18	-	526	3	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	22183	2993	22183	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGAAGGTCATTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	60824278	60822042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60822437_60823035_60823139_60824249
ENSMUSG00000054008.10_60822158_60828428_1	chr18	-	513	4	ISM	ENSMUSG00000054008.10	ENST00000523767.5	3494	14	41466	251	18033	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAAGCGCCTCAGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	60828428	60822157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60822437_60823035_60823139_60824249_60824360_60828407
ENSMUSG00000054008.10_60822213_60828492_1	chr18	-	522	4	ISM	ENSMUSG00000054008.10	ENST00000523767.5	3494	14	41402	306	17969	-306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCGACGAGCAATACTCT	NA	NA	NA	NA	NA	NA	NA	NA	60828492	60822212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60822437_60823035_60823139_60824249_60824360_60828407
ENSMUSG00000054008.10_60822279_60830158_1	chr18	-	566	5	ISM	ENSMUSG00000054008.10	ENST00000523767.5	3494	14	39736	372	16303	-372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGATGTCCTGCCTCACAC	NA	NA	NA	NA	NA	NA	NA	NA	60830158	60822278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60822437_60823035_60823139_60824249_60824360_60828407_60828583_60830138
ENSMUSG00000054008.10_60822362_60830213_1	chr18	-	538	5	ISM	ENSMUSG00000054008.10	ENST00000523767.5	3494	14	39681	455	16248	-455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCCCACCTGGCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	60830213	60822361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60822437_60823035_60823139_60824249_60824360_60828407_60828583_60830138
ENSMUSG00000054008.10_60822422_60830260_1	chr18	-	525	5	ISM	ENSMUSG00000054008.10	ENST00000523767.5	3494	14	39634	515	16201	-515	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATTACTTCCGGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	60830260	60822421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60822437_60823035_60823139_60824249_60824360_60828407_60828583_60830138
ENSMUSG00000054008.10_60823129_60831562_1	chr18	-	471	5	ISM	ENSMUSG00000054008.10	ENST00000523767.5	3494	14	38332	1222	14899	-1222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGGATTTTGGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	60831562	60823128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60823139_60824249_60824360_60828407_60828583_60830138_60830263_60831510
ENSMUSG00000054008.10_60824294_60832651_1	chr18	-	534	5	ISM	ENSMUSG00000054008.10	ENST00000523767.5	3494	14	37243	2387	13810	-2387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGGGGTGACCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	60832651	60824293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60824360_60828407_60828583_60830138_60830263_60831510_60831608_60832579
ENSMUSG00000054008.10_60828519_60833516_1	chr18	-	541	5	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	12945	9469	12945	-6612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACTTTGATTCAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	60833516	60828518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443
ENSMUSG00000054008.10_60830139_60835863_1	chr18	-	552	5	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	10598	11089	10598	-8232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGGCCTTCTGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	60835863	60830138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844
ENSMUSG00000054008.10_60830209_60835904_1	chr18	-	523	5	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	10557	11159	10557	-8302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAGCTCCGAGACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	60835904	60830208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844
ENSMUSG00000054008.10_60832584_60836858_1	chr18	-	544	4	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	9603	13534	9603	-10677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGTGGGCAGAGTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	60836858	60832583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60832763_60833443_60833573_60835844_60836031_60836808
ENSMUSG00000054008.10_60832649_60836914_1	chr18	-	535	4	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	9547	13599	9547	-10742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCCCCGTGCAGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	60836914	60832648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60832763_60833443_60833573_60835844_60836031_60836808
ENSMUSG00000054008.10_60832725_60838179_1	chr18	-	540	5	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	8282	13675	8282	-10818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCGCCTGGGACTATACA	NA	NA	NA	NA	NA	NA	NA	NA	60838179	60832724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147
ENSMUSG00000054008.10_60833509_60840723_1	chr18	-	544	5	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	5738	14459	5738	-11602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCAGTGAGCTGGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	60840723	60833508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672
ENSMUSG00000054008.10_60835943_60840865_1	chr18	-	524	4	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	5596	16893	5596	-14036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCAAGTGTGGGGCATC	NA	NA	NA	NA	NA	NA	NA	NA	60840865	60835942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60836031_60836808_60836964_60838147_60838236_60840672
ENSMUSG00000054008.10_60835991_60840919_1	chr18	-	530	4	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	5542	16941	5542	-14084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCACTCCGGTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	60840919	60835990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60836031_60836808_60836964_60838147_60838236_60840672
ENSMUSG00000054008.10_60836909_60841030_1	chr18	-	501	3	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	5431	17859	5431	-15002	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGTTCCCCCACATGT	NA	NA	NA	NA	NA	NA	NA	NA	60841030	60836908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60836964_60838147_60838236_60840672
ENSMUSG00000054008.10_60836945_60841130_1	chr18	-	565	3	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	5331	17895	5331	-15038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGACGATCTGCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	60841130	60836944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60836964_60838147_60838236_60840672
ENSMUSG00000054008.10_60840767_60845943_1	chr18	-	550	2	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	518	21717	518	-18860	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCACTGCCTTTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	60845943	60840766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60841168_60845794
ENSMUSG00000054008.10_60841006_60846160_1	chr18	-	528	2	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	301	21956	301	-19099	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTTCCAGTCCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	60846160	60841005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60841168_60845794
ENSMUSG00000054008.10_60841071_60846219_1	chr18	-	522	2	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	242	22021	242	-19164	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACTGCTCTATGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	60846219	60841070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60841168_60845794
ENSMUSG00000054008.10_60846228_60869763_1	chr18	-	555	2	ISM	ENSMUSG00000054008.10	ENST00000523767.5	3494	14	131	24321	131	-24321	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTCAGCGTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	60869763	60846227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_60846697_60869677
ENSMUSG00000054021.7_43524311_43538995_1	chr13	+	558	6	ISM	ENSMUSG00000054021.7	ENST00000680402.1	806	7	89	9282	89	-820	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTGCCATGTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	43524310	43538995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43538973
ENSMUSG00000054021.7_43525308_43539091_1	chr13	+	620	5	ISM	ENSMUSG00000054021.7	ENST00000680402.1	806	7	1086	9186	1086	-724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGGACAACCGAACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	43525307	43539091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43538973
ENSMUSG00000054021.7_43525308_43548277_1	chr13	+	595	5	ISM	ENSMUSG00000054021.7	ENST00000681243.1	718	6	1086	0	1086	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTCTTAACCGCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	43525307	43548277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_43525442_43530170_43530397_43533975_43534030_43538973_43539090_43548212
ENSMUSG00000054021.7_43525369_43548258_1	chr13	+	603	6	ISM	ENSMUSG00000054021.7	ENST00000680402.1	806	7	1147	19	1147	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCCTCATGAAACTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	43525368	43548258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43538973_43539090_43548212
ENSMUSG00000054021.7_43530166_43548277_1	chr13	+	554	5	ISM	ENSMUSG00000054021.7	ENST00000680402.1	806	7	5944	0	5944	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTCTTAACCGCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	43530165	43548277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_43530397_43533148_43533237_43533975_43534030_43538973_43539090_43548212
ENSMUSG00000054079.13_93750069_93776592_10	chr11	-	2606	14	NNC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGCTTTGATCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	93776592	93750068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760716_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ENSMUSG00000054079.13_93750069_93776592_11	chr11	-	2607	14	NNC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGCTTTGATCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	93776592	93750068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_93750895_93751619_93751664_93752790_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ENSMUSG00000054079.13_93750069_93776592_12	chr11	-	2604	14	NNC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGCTTTGATCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	93776592	93750068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_93750895_93751619_93751664_93752784_93752928_93757180_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ENSMUSG00000054079.13_93750069_93776592_13	chr11	-	2607	14	NNC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGCTTTGATCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	93776592	93750068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774603_93776159
ENSMUSG00000054079.13_93750069_93776592_2	chr11	-	2604	14	NNC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGCTTTGATCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	93776592	93750068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761398_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ENSMUSG00000054079.13_93750069_93776592_3	chr11	-	2607	14	NNC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGCTTTGATCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	93776592	93750068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767001_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ENSMUSG00000054079.13_93750069_93776592_5	chr11	-	2606	14	NNC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGCTTTGATCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	93776592	93750068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768892_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ENSMUSG00000054079.13_93750069_93776592_6	chr11	-	2606	14	NNC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGCTTTGATCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	93776592	93750068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770953_93772900_93773000_93774492_93774609_93776159
ENSMUSG00000054079.13_93750069_93776592_8	chr11	-	2606	14	NNC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGCTTTGATCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	93776592	93750068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757340_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ENSMUSG00000054079.13_93750069_93776592_9	chr11	-	2604	14	NNC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGCTTTGATCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	93776592	93750068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759272_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ENSMUSG00000054091.10_122717986_122719833_1	chr3	+	1026	2	FSM	ENSMUSG00000054091.10	ENSMUST00000106429.6	1160	2	134	0	134	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTTCACACTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	122717985	122719833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_122718306_122719127
ENSMUSG00000054115.13_9108363_9125274_1	chr15	-	888	7	ISM	ENSMUSG00000054115.13	ENST00000678270.1	1538	10	15157	89	14519	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTTCCTCCATCCACAACC	NA	NA	NA	NA	NA	NA	NA	NA	9125274	9108362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_9108598_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146
ENSMUSG00000054115.13_9108436_9127995_1	chr15	-	854	8	ISM	ENSMUSG00000054115.13	ENST00000678270.1	1538	10	12436	162	11798	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCACAGTTCGAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	9127995	9108435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_9108598_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972
ENSMUSG00000054115.13_9113390_9128026_1	chr15	-	1289	8	ISM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	12426	1317	11767	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTCATGGTGTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	9128026	9113389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972
ENSMUSG00000054115.13_9113576_9139640_1	chr15	-	1283	9	ISM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	812	1503	153	144	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACTATAGAGCCGATTC	NA	NA	NA	NA	NA	NA	NA	NA	9139640	9113575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972_9128085_9139518
ENSMUSG00000054115.13_9113795_9140439_1	chr15	-	1383	10	FSM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	13	1722	-8	-75	multi-exon	FALSE	canonical	NA	NA	NA	NA	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGGGGTATCAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	9140439	9113794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972_9128085_9139518_9139791_9140270
ENSMUSG00000054115.13_9113848_9117232_1	chr15	-	265	3	NNC	ENSMUSG00000054115.13	novel	984	4	NA	NA	22561	-128	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTATTTCACCACCATTG	NA	NA	NA	NA	NA	NA	NA	NA	9117232	9113847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_9113956_9116947_9117050_9117177
ENSMUSG00000054115.13_9113937_9139569_1	chr15	-	230	4	FSM	ENSMUSG00000054115.13	ENST00000508514.5	671	4	224	217	224	-217	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACTAAAAACGCTACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	9139569	9113936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9139518
ENSMUSG00000054115.13_9116979_9139621_1	chr15	-	232	3	ISM	ENSMUSG00000054115.13	ENST00000508514.5	671	4	172	3259	172	-3259	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGCTATGATATAATACCT	NA	NA	NA	NA	NA	NA	NA	NA	9139621	9116978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_9117056_9117177_9117230_9139518
ENSMUSG00000054115.13_9117035_9139666_1	chr15	-	221	3	ISM	ENSMUSG00000054115.13	ENST00000508514.5	671	4	127	3315	127	-3315	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGCTTTCCAGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	9139666	9117034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_9117056_9117177_9117230_9139518
ENSMUSG00000054146.9_100022835_100026598_1	chr11	-	1178	6	ISM	ENSMUSG00000054146.9	ENST00000393974.7	2434	7	3355	9	156	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGGAGAGAACAACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	100026598	100022834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100022922_100023782_100024038_100024214_100024341_100024455_100024618_100025000_100025158_100026207
ENSMUSG00000054146.9_100022892_100026754_1	chr11	-	1277	6	ISM	ENSMUSG00000054146.9	ENST00000393974.7	2434	7	3199	66	0	-66	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATCAGTGGATGGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	100026754	100022891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100022922_100023782_100024038_100024214_100024341_100024455_100024618_100025000_100025158_100026207
ENSMUSG00000054146.9_100024215_100026890_1	chr11	-	1128	4	ISM	ENSMUSG00000054146.9	ENST00000393974.7	2434	7	3063	1389	-136	-1389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGGTCACTCTGGCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	100026890	100024214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100024341_100024455_100024618_100025000_100025158_100026207
ENSMUSG00000054146.9_100024456_100027081_1	chr11	-	1193	3	ISM	ENSMUSG00000054146.9	ENST00000393974.7	2434	7	2872	1630	-327	-1630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTCTGACCTCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	100027081	100024455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100024618_100025000_100025158_100026207
ENSMUSG00000054146.9_100024512_100027126_1	chr11	-	1182	3	ISM	ENSMUSG00000054146.9	ENST00000393974.7	2434	7	2827	1686	-372	-1686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGCTATTGCAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	100027126	100024511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100024618_100025000_100025158_100026207
ENSMUSG00000054146.9_100024549_100027201_1	chr11	-	1220	3	ISM	ENSMUSG00000054146.9	ENST00000393974.7	2434	7	2752	1723	-447	-1723	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGACCCGCATGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	100027201	100024548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100024618_100025000_100025158_100026207
ENSMUSG00000054146.9_100025107_100027356_1	chr11	-	1200	2	ISM	ENSMUSG00000054146.9	ENST00000393974.7	2434	7	2597	2281	-602	-2281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGCCGGGTGCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	100027356	100025106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100025158_100026207
ENSMUSG00000054150.13_104898398_104927828_1	chr12	-	2049	13	ISM	ENSMUSG00000054150.13	ENST00000682763.1	2955	17	14326	0	14326	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCCCTCAGAGGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	104927828	104898397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_104898619_104905840_104905880_104906864_104907015_104909563_104909723_104911339_104911470_104912824_104912998_104913150_104913313_104919244_104919380_104920421_104920566_104921785_104921969_104924212_104924388_104925655_104925790_104927584
ENSMUSG00000054150.13_104898588_104929455_1	chr12	-	1989	14	ISM	ENSMUSG00000054150.13	ENST00000682763.1	2955	17	12699	190	12699	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATGCCGTGTGGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	104929455	104898587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_104898619_104905840_104905880_104906864_104907015_104909563_104909723_104911339_104911470_104912824_104912998_104913150_104913313_104919244_104919380_104920421_104920566_104921785_104921969_104924212_104924388_104925655_104925790_104927584_104927933_104929429
ENSMUSG00000054150.13_104906963_104934194_1	chr12	-	2010	13	ISM	ENSMUSG00000054150.13	ENST00000682763.1	2955	17	7960	8565	7960	-8565	internal_fragment	TRUE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCAGGCCGGCAAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	104934194	104906962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_104907015_104909563_104909723_104911339_104911470_104912824_104912998_104913150_104913313_104919244_104919380_104920421_104920566_104921785_104921969_104924212_104924388_104925655_104925790_104927584_104927933_104929429_104929587_104934136
ENSMUSG00000054150.13_104909656_104934317_1	chr12	-	1989	12	ISM	ENSMUSG00000054150.13	ENST00000682763.1	2955	17	7837	11258	7837	-11258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGCAGGCAGAAAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	104934317	104909655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_104909723_104911339_104911470_104912824_104912998_104913150_104913313_104919244_104919380_104920421_104920566_104921785_104921969_104924212_104924388_104925655_104925790_104927584_104927933_104929429_104929587_104934136
ENSMUSG00000054150.13_104911424_104935492_1	chr12	-	2004	12	ISM	ENSMUSG00000054150.13	ENST00000682763.1	2955	17	6662	13026	6662	-13026	internal_fragment	TRUE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCAGGTGTTCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	104935492	104911423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_104911470_104912824_104912998_104913150_104913313_104919244_104919380_104920421_104920566_104921785_104921969_104924212_104924388_104925655_104925790_104927584_104927933_104929429_104929587_104934136_104934451_104935459
ENSMUSG00000054150.13_104912825_104935634_1	chr12	-	2100	11	ISM	ENSMUSG00000054150.13	ENST00000682763.1	2955	17	6520	14427	6520	-14427	internal_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGACTTCTTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	104935634	104912824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_104912998_104913150_104913313_104919244_104919380_104920421_104920566_104921785_104921969_104924212_104924388_104925655_104925790_104927584_104927933_104929429_104929587_104934136_104934451_104935459
ENSMUSG00000054150.13_104912969_104942041_1	chr12	-	1999	12	ISM	ENSMUSG00000054150.13	ENST00000682763.1	2955	17	113	14571	113	-14571	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCAGGTGTCCCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	104942041	104912968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_104912998_104913150_104913313_104919244_104919380_104920421_104920566_104921785_104921969_104924212_104924388_104925655_104925790_104927584_104927933_104929429_104929587_104934136_104934451_104935459_104935633_104941996
ENSMUSG00000054150.13_104913241_104942154_1	chr12	-	1993	11	ISM	ENSMUSG00000054150.13	ENST00000682763.1	2955	17	0	14843	0	-14843	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGATCACCATGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	104942154	104913240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_104913313_104919244_104919380_104920421_104920566_104921785_104921969_104924212_104924388_104925655_104925790_104927584_104927933_104929429_104929587_104934136_104934451_104935459_104935633_104941996
ENSMUSG00000054162.16_63404834_63808703_1	chr8	+	1475	9	FSM	ENSMUSG00000054162.16	ENST00000541354.5	2661	9	0	1186	0	-107	multi-exon	TRUE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTTTTCCACAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	63404833	63808703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_63405023_63566576_63566623_63673673_63673798_63698132_63698248_63781897_63782018_63798698_63798921_63801953_63802017_63805214_63805353_63808245
ENSMUSG00000054162.16_63404959_63698247_1	chr8	+	464	5	ISM	ENSMUSG00000054162.16	ENST00000510741.5	1579	9	127	110563	125	-110563	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGACAGAAACTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	63404958	63698247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_63405023_63566576_63566623_63596932_63597048_63673673_63673798_63698132
ENSMUSG00000054162.16_63404959_63808764_1	chr8	+	1411	9	FSM	ENSMUSG00000054162.16	ENST00000541354.5	2661	9	125	1125	125	-46	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAGATTGTATAAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	63404958	63808764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_63405023_63566576_63566623_63673673_63673798_63698132_63698248_63781897_63782018_63798698_63798921_63801953_63802017_63805214_63805353_63808245
ENSMUSG00000054162.16_63404959_63808820_1	chr8	+	1467	9	FSM	ENSMUSG00000054162.16	ENST00000541354.5	2661	9	125	1069	125	10	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATCGATTAACTCATG	NA	NA	NA	NA	NA	NA	NA	NA	63404958	63808820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_63405023_63566576_63566623_63673673_63673798_63698132_63698248_63781897_63782018_63798698_63798921_63801953_63802017_63805214_63805353_63808245
ENSMUSG00000054162.16_63566577_63798751_1	chr8	+	453	5	ISM	ENSMUSG00000054162.16	ENST00000510741.5	1579	9	161745	10059	161743	-10059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGACTTGATACAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	63566576	63798751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_63566623_63596932_63597048_63673673_63673798_63698132_63698248_63798698
ENSMUSG00000054162.16_63596964_63798856_1	chr8	+	481	4	ISM	ENSMUSG00000054162.16	ENST00000510741.5	1579	9	192132	9954	192130	-9954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACTTACAAGGACAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	63596963	63798856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_63597048_63673673_63673798_63698132_63698248_63798698
ENSMUSG00000054162.16_63673672_63802017_1	chr8	+	527	4	ISM	ENSMUSG00000054162.16	ENST00000510741.5	1579	9	268840	6793	268838	-6793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCACAGCTCACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	63673671	63802017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_63673798_63698132_63698248_63798698_63798921_63801953
ENSMUSG00000054162.16_63673711_63808972_1	chr8	+	1472	7	ISM	ENSMUSG00000054162.16	ENST00000541354.5	2661	9	268877	917	268877	162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAATGCAAACTATGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	63673710	63808972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_63673798_63698132_63698248_63781897_63782018_63798698_63798921_63801953_63802017_63805214_63805353_63808245
ENSMUSG00000054162.16_63698216_63809134_1	chr8	+	1464	6	ISM	ENSMUSG00000054162.16	ENST00000541354.5	2661	9	293382	755	293382	324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAGAATTTCAATTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	63698215	63809134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_63698248_63781897_63782018_63798698_63798921_63801953_63802017_63805214_63805353_63808245
ENSMUSG00000054162.16_63781960_63809261_1	chr8	+	1497	5	ISM	ENSMUSG00000054162.16	ENST00000541354.5	2661	9	377126	628	377126	451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGATCTTGGAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	63781959	63809261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_63782018_63798698_63798921_63801953_63802017_63805214_63805353_63808245
ENSMUSG00000054162.16_63798831_63809421_1	chr8	+	1467	4	ISM	ENSMUSG00000054162.16	ENST00000541354.5	2661	9	393997	468	393997	-465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATACTGCTAGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	63798830	63809421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_63798921_63801953_63802017_63805214_63805353_63808245
ENSMUSG00000054162.16_63801972_63809523_1	chr8	+	1461	3	ISM	ENSMUSG00000054162.16	ENST00000541354.5	2661	9	397138	366	397138	-363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTAAGATTACCTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	63801971	63809523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_63802017_63805214_63805353_63808245
ENSMUSG00000054196.8_38940351_38950192_1	chr15	+	818	4	FSM	ENSMUSG00000054196.8	ENSMUST00000067072.5	1166	4	24	324	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTTAAATCAAGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	38940350	38950192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_38940555_38943877_38944100_38947660_38947878_38950017
ENSMUSG00000054199.18_88787410_88802320_1	chr3	+	1074	8	FSM	ENSMUSG00000054199.18	ENST00000295566.8	1937	8	32	831	32	-831	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTTCTCCAGAAAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	88787409	88802320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799884_88799976_88801748_88801866_88802126
ENSMUSG00000054199.18_88794282_88802451_1	chr3	+	1064	7	ISM	ENSMUSG00000054199.18	ENST00000295566.8	1937	8	6904	700	6904	-700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTCCAAGCAACACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	88794281	88802451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799884_88799976_88801748_88801866_88802126
ENSMUSG00000054199.18_88794863_88802603_1	chr3	+	1089	6	ISM	ENSMUSG00000054199.18	ENST00000295566.8	1937	8	7485	548	7485	-548	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGACCACCTTCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	88794862	88802603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88794953_88796977_88797147_88798119_88798265_88799884_88799976_88801748_88801866_88802126
ENSMUSG00000054199.18_88797053_88802747_1	chr3	+	1064	5	NNC	ENSMUSG00000054199.18	novel	1937	8	NA	NA	9675	-404	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCCCCTGTGTGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	88797052	88802747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_88797147_88798119_88798265_88799888_88799976_88801748_88801866_88802126
ENSMUSG00000054199.18_88798119_88802795_1	chr3	+	1023	4	ISM	ENSMUSG00000054199.18	ENST00000295566.8	1937	8	10741	356	10741	-356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCACAGTTCCTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	88798118	88802795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88798265_88799884_88799976_88801748_88801866_88802126
ENSMUSG00000054199.18_88798119_88802913_1	chr3	+	1141	4	ISM	ENSMUSG00000054199.18	ENST00000295566.8	1937	8	10741	238	10741	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCAACCCCACTACT	NA	NA	NA	NA	NA	NA	NA	NA	88798118	88802913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88798265_88799884_88799976_88801748_88801866_88802126
ENSMUSG00000054199.18_88799885_88803026_1	chr3	+	1108	3	ISM	ENSMUSG00000054199.18	ENST00000295566.8	1937	8	12507	125	12507	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAAGATAAGGCCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	88799884	88803026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88799976_88801748_88801866_88802126
ENSMUSG00000054199.18_88801749_88803151_1	chr3	+	1142	2	ISM	ENSMUSG00000054199.18	ENST00000295566.8	1937	8	14371	0	14371	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAAGTCCTGGCATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	88801748	88803151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_88801866_88802126
ENSMUSG00000054204.7_30937223_30940093_1	chr12	+	99	2	ISM	ENSMUSG00000054204.7	ENST00000401503.5	588	4	180	3537	180	-3537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGTAAGCTCCCAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	30937222	30940093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_30937260_30940031
ENSMUSG00000054226.14_85901351_85905915_1	chr6	+	695	4	FSM	ENSMUSG00000054226.14	ENST00000318190.7	637	4	8	-66	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGCGGATTTCTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	85901350	85905915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_85901505_85904139_85904346_85904789_85904967_85905757
ENSMUSG00000054226.14_85901351_85905915_2	chr6	+	686	4	NNC	ENSMUSG00000054226.14	novel	637	4	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGCGGATTTCTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	85901350	85905915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_85901505_85904139_85904346_85904789_85904958_85905757
ENSMUSG00000054226.14_85904855_85906061_1	chr6	+	416	2	ISM	ENSMUSG00000054226.14	ENST00000318190.7	637	4	3512	-212	3512	54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTCAGGAGGCTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	85904854	85906061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_85904967_85905757
ENSMUSG00000054237.7_38176929_38202905_1	chr19	-	929	9	ISM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	9681	0	9681	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGAGTCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	38202905	38176928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821
ENSMUSG00000054237.7_38177190_38208126_1	chr19	-	838	12	ISM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	4460	261	4460	-261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCCTTGGTGAGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	38208126	38177189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079
ENSMUSG00000054237.7_38178272_38210361_1	chr19	-	910	12	ISM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	2225	1343	2225	-1343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATTCGCAGGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	38210361	38178271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284
ENSMUSG00000054277.9_83184881_83192377_1	chr15	-	360	4	ISM	ENSMUSG00000054277.9	ENST00000437119.6	1464	14	42019	0	41998	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCAGGCTGTCCAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	83192377	83184880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253
ENSMUSG00000054277.9_83187361_83194515_1	chr15	-	345	4	ISM	ENSMUSG00000054277.9	ENST00000437119.6	1464	14	39881	2480	39860	-2480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCGTTGCTGGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	83194515	83187360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83187426_83191081_83191173_83192253_83192378_83194450
ENSMUSG00000054277.9_83191123_83197720_1	chr15	-	360	4	ISM	ENSMUSG00000054277.9	ENSMUST00000067215.9	2619	16	36728	7183	36655	-6242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCAGACCTTTTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	83197720	83191122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83191173_83192253_83192378_83194450_83194586_83197669
ENSMUSG00000054277.9_83192346_83198589_1	chr15	-	360	4	ISM	ENSMUSG00000054277.9	ENSMUST00000067215.9	2619	16	35859	8406	35786	-7465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTGGCAGCACAGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	83198589	83192345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83192378_83194450_83194586_83197669_83197814_83198540
ENSMUSG00000054277.9_83194450_83198578_1	chr15	-	294	3	ISM	ENSMUSG00000054277.9	ENST00000437119.6	1464	14	35818	9569	35797	-9569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGCTGCAGGCTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	83198578	83194449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83194583_83197690_83197814_83198540
ENSMUSG00000054277.9_83194516_83198615_1	chr15	-	265	3	ISM	ENSMUSG00000054277.9	ENST00000437119.6	1464	14	35781	9635	35760	-9635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGGAAGAAAGACAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	83198615	83194515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83194583_83197690_83197814_83198540
ENSMUSG00000054277.9_83194560_83206826_1	chr15	-	351	4	ISM	ENSMUSG00000054277.9	ENSMUST00000067215.9	2619	16	27622	10620	27549	-9679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGCAGCTCCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83206826	83194559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83194586_83197669_83197814_83198540_83198670_83206774
ENSMUSG00000054277.9_83194565_83198669_1	chr15	-	270	3	ISM	ENSMUSG00000054277.9	ENST00000437119.6	1464	14	35727	9684	35706	-9684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTTAAGAAGCAGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	83198669	83194564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83194583_83197690_83197814_83198540
ENSMUSG00000054277.9_83197797_83208351_1	chr15	-	333	4	ISM	ENSMUSG00000054277.9	ENST00000437119.6	1464	14	26045	12916	26024	-12916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCAGACATGCAGACC	NA	NA	NA	NA	NA	NA	NA	NA	83208351	83197796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83197814_83198540_83198670_83206774_83206915_83208304
ENSMUSG00000054277.9_83198616_83214757_1	chr15	-	339	5	ISM	ENSMUSG00000054277.9	ENSMUST00000226124.2	2461	16	19618	14594	19618	-13735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGACTGAACCTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	83214757	83198615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719
ENSMUSG00000054277.9_83206852_83218697_1	chr15	-	361	6	ISM	ENSMUSG00000054277.9	ENSMUST00000226124.2	2461	16	15678	22830	15678	-21971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGCAAGCTCAGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	83218697	83206851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678
ENSMUSG00000054277.9_83206881_83216928_1	chr15	-	265	4	ISM	ENSMUSG00000054277.9	ENST00000437119.6	1464	14	17468	22000	17447	-22000	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGACAAATACATCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	83216928	83206880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83206915_83208304_83208352_83211805_83211944_83216882
ENSMUSG00000054277.9_83211893_83227277_1	chr15	-	267	4	ISM	ENSMUSG00000054277.9	ENST00000437119.6	1464	14	7119	27012	7098	-27012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATCAGCATTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	83227277	83211892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83211944_83216882_83216971_83220854_83220928_83227222
ENSMUSG00000054277.9_83214790_83227259_1	chr15	-	344	5	ISM	ENSMUSG00000054277.9	ENSMUST00000226124.2	2461	16	7116	30768	7116	-29909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCCGCACAGCCAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	83227259	83214789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222
ENSMUSG00000054302.16_54718440_54725409_1	chr12	-	2088	3	NNC	ENSMUSG00000054302.16	novel	2658	7	NA	NA	17197	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACATAAAATAAAATAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	54725409	54718439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_54718653_54718875_54720636_54725294
ENSMUSG00000054302.16_54718440_54732713_1	chr12	-	2162	4	NNC	ENSMUSG00000054302.16	novel	2658	7	NA	NA	9893	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACATAAAATAAAATAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	54732713	54718439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_54718632_54718848_54720636_54725294_54725409_54732644
ENSMUSG00000054302.16_54718568_54738804_1	chr12	-	2101	5	NNC	ENSMUSG00000054302.16	novel	4186	6	NA	NA	3802	-128	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAGGATTAGAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	54738804	54718567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_54718653_54718865_54720636_54725294_54725409_54732644_54732757_54738784
ENSMUSG00000054302.16_54719008_54742606_1	chr12	-	2243	6	FSM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	60	1883	0	-568	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTTGGGTCTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	54742606	54719007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ENSMUSG00000054302.16_54719086_54742606_1	chr12	-	2165	6	FSM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	60	1961	0	-646	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGTGTGTCTGAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	54742606	54719085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ENSMUSG00000054302.16_54719155_54742628_1	chr12	-	2118	6	FSM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	38	2030	19	-715	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGAGTCCAATTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	54742628	54719154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ENSMUSG00000054309.10_21336400_21341766_1	chr12	+	225	3	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	0	16471	0	-16471	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTGGCCTGGAAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	21336399	21341766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_21336546_21340248_21340313_21341751
ENSMUSG00000054309.10_21336522_21343258_1	chr12	+	218	4	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	122	14979	122	-14979	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCCTTCAGAAGACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	21336521	21343258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226
ENSMUSG00000054309.10_21343317_21345208_1	chr12	+	217	2	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	6917	13029	6917	-13029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGCTCTAGCTTGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	21343316	21345208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_21343356_21345030
ENSMUSG00000054309.10_21347855_21350162_1	chr12	+	206	2	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	11455	8075	11455	-8075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGCAGATCAACATCAAC	NA	NA	NA	NA	NA	NA	NA	NA	21347854	21350162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_21347941_21350042
ENSMUSG00000054309.10_21347910_21350218_1	chr12	+	207	2	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	11510	8019	11510	-8019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCGCTCTTGGAGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	21347909	21350218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_21347941_21350042
ENSMUSG00000054309.10_21350093_21351499_1	chr12	+	209	2	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	13693	6738	13693	-6738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAAAGCTGGTGTACAG	NA	NA	NA	NA	NA	NA	NA	NA	21350092	21351499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_21350219_21351416
ENSMUSG00000054309.10_21350142_21351560_1	chr12	+	221	2	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	13742	6677	13742	-6677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACACTTGCCAAGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	21350141	21351560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_21350219_21351416
ENSMUSG00000054309.10_21351418_21352400_1	chr12	+	199	2	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	15018	5837	15018	-5837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAGTTGCCACTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21351417	21352400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_21351576_21352359
ENSMUSG00000054309.10_21351460_21352459_1	chr12	+	216	2	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	15060	5778	15060	-5778	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGCAAACCAGTGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	21351459	21352459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_21351576_21352359
ENSMUSG00000054309.10_21351532_21355333_1	chr12	+	221	3	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	15132	2904	15132	-2904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCTGAAAGCAGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	21351531	21355333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_21351576_21352359_21352507_21355303
ENSMUSG00000054309.10_21352469_21356794_1	chr12	+	212	3	ISM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	16110	8263	16069	-1443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACCAGAACAGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	21352468	21356794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_21352507_21355303_21355457_21356773
ENSMUSG00000054309.10_21355403_21358056_1	chr12	+	226	3	ISM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	19044	7001	19003	-181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGCTCTACTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	21355402	21358056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_21355457_21356773_21356883_21357993
ENSMUSG00000054309.10_21356836_21358970_1	chr12	+	212	3	ISM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	20477	6087	20436	733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGAGCCGGGCATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	21356835	21358970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_21356883_21357993_21358093_21358904
ENSMUSG00000054309.10_21357994_21360229_1	chr12	+	226	3	ISM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	21635	4828	21594	1992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACACAGTGACCACCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	21357993	21360229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_21358093_21358904_21359000_21360197
ENSMUSG00000054320.17_106154272_106178682_1	chr8	+	935	6	ISM	ENSMUSG00000054320.17	ENSMUST00000067305.8	2082	11	0	12036	0	-12024	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAACGTGGAGCAACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	106154271	106178682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106154456_106158156_106158246_106170365_106170494_106172839_106172889_106176018_106176460_106178638
ENSMUSG00000054320.17_106154378_106178729_1	chr8	+	876	6	ISM	ENSMUSG00000054320.17	ENST00000435835.3	1700	9	57	11977	57	-11977	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTTCTTTCCCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	106154377	106178729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106154456_106158156_106158246_106170365_106170494_106172839_106172889_106176018_106176460_106178638
ENSMUSG00000054320.17_106154428_106178781_1	chr8	+	878	6	ISM	ENSMUSG00000054320.17	ENST00000435835.3	1700	9	107	11925	107	-11925	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCCTCCTGGGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	106154427	106178781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106154456_106158156_106158246_106170365_106170494_106172839_106172889_106176018_106176460_106178638
ENSMUSG00000054320.17_106170471_106185151_1	chr8	+	930	5	NIC	ENSMUSG00000054320.17	novel	2082	11	NA	NA	16150	-5555	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTAGGAAAGCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	106170470	106185151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_106170494_106172839_106172889_106176018_106176460_106178638_106178932_106185027
ENSMUSG00000054320.17_106176018_106187715_1	chr8	+	925	4	NIC	ENSMUSG00000054320.17	novel	2082	11	NA	NA	21697	-2991	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGAAAAGACTGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	106176017	106187715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_106176460_106178638_106178932_106185027_106185152_106187649
ENSMUSG00000054320.17_106176018_106187715_2	chr8	+	920	4	NNC	ENSMUSG00000054320.17	novel	2082	11	NA	NA	21697	-2991	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGAAAAGACTGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	106176017	106187715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106176460_106178638_106178932_106185032_106185152_106187649
ENSMUSG00000054320.17_106176096_106187766_1	chr8	+	898	4	NIC	ENSMUSG00000054320.17	novel	2082	11	NA	NA	21775	-2940	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCAGGCCTGGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	106176095	106187766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_106176460_106178638_106178932_106185027_106185152_106187649
ENSMUSG00000054320.17_106176096_106187766_2	chr8	+	893	4	NNC	ENSMUSG00000054320.17	novel	2082	11	NA	NA	21775	-2940	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCAGGCCTGGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	106176095	106187766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106176460_106178638_106178932_106185032_106185152_106187649
ENSMUSG00000054320.17_106176240_106190504_1	chr8	+	882	5	NIC	ENSMUSG00000054320.17	novel	2082	11	NA	NA	21919	-202	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTGTCTTCCTCCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	106176239	106190504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_106176460_106178638_106178932_106185027_106185152_106187649_106187765_106190374
ENSMUSG00000054320.17_106176242_106190518_1	chr8	+	889	5	NNC	ENSMUSG00000054320.17	novel	2082	11	NA	NA	21921	-188	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCACCAATGGTACACGACA	NA	NA	NA	NA	NA	NA	NA	NA	106176241	106190518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106176460_106178638_106178932_106185032_106185152_106187649_106187765_106190374
ENSMUSG00000054320.17_106176332_106190591_1	chr8	+	868	5	NNC	ENSMUSG00000054320.17	novel	1700	9	NA	NA	22011	-115	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	411	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCTAGCACCGCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	106176331	106190591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_106176460_106178638_106178923_106185027_106185152_106187649_106187765_106190374
ENSMUSG00000054320.17_106178636_106190711_1	chr8	+	872	4	NIC	ENSMUSG00000054320.17	novel	2082	11	NA	NA	24315	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTCTATTGTCCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	106178635	106190711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_106178932_106185027_106185152_106187649_106187765_106190374
ENSMUSG00000054342.9_24069763_24084630_2	chr7	+	1864	9	NNC	ENSMUSG00000054342.9	novel	1945	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACAGCAGCTGCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	24069762	24084630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_24070021_24074096_24074187_24076707_24077130_24078558_24078695_24081076_24081188_24081586_24081706_24081896_24081967_24083433_24083608_24084146
ENSMUSG00000054342.9_24069763_24084630_3	chr7	+	1861	9	NNC	ENSMUSG00000054342.9	novel	1945	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACAGCAGCTGCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	24069762	24084630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_24070021_24074096_24074193_24076707_24077130_24078558_24078695_24081076_24081188_24081586_24081706_24081896_24081967_24083433_24083608_24084155
ENSMUSG00000054342.9_24069763_24084630_4	chr7	+	1864	9	NNC	ENSMUSG00000054342.9	novel	1945	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACAGCAGCTGCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	24069762	24084630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_24070021_24074096_24074193_24076707_24077130_24078558_24078695_24081076_24081188_24081592_24081706_24081896_24081967_24083433_24083608_24084146
ENSMUSG00000054362.10_106448507_106472627_1	chr4	-	1293	8	ISM	ENSMUSG00000054362.10	ENST00000371273.4	1584	10	1862	-38	1808	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGTGAAGCTAGAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	106472627	106448506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106448885_106464485_106464620_106467596_106467716_106468603_106468772_106470305_106470450_106470564_106470700_106472231_106472355_106472535
ENSMUSG00000054362.10_106448677_106473188_1	chr4	-	1286	9	ISM	ENSMUSG00000054362.10	ENST00000371273.4	1584	10	1301	132	1247	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGCGGTCAAAAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	106473188	106448676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_106448885_106464485_106464620_106467596_106467716_106468603_106468772_106470305_106470450_106470564_106470700_106472231_106472355_106472535_106472701_106473098
ENSMUSG00000054362.10_106448677_106474435_1	chr4	-	1398	10	FSM	ENSMUSG00000054362.10	ENST00000371273.4	1584	10	54	132	0	-132	multi-exon	FALSE	canonical	NA	NA	NA	NA	1764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGCGGTCAAAAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	106474435	106448676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_106448885_106464485_106464620_106467596_106467716_106468603_106468772_106470305_106470450_106470564_106470700_106472231_106472355_106472535_106472701_106473098_106473187_106474321
ENSMUSG00000054362.10_106448818_106474435_1	chr4	-	1257	10	FSM	ENSMUSG00000054362.10	ENST00000371273.4	1584	10	54	273	0	-273	multi-exon	FALSE	canonical	NA	NA	NA	NA	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTAAAGCCACTCGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	106474435	106448817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_106448885_106464485_106464620_106467596_106467716_106468603_106468772_106470305_106470450_106470564_106470700_106472231_106472355_106472535_106472701_106473098_106473187_106474321
ENSMUSG00000054387.14_132919395_132940449_1	chr1	-	1391	9	ISM	ENSMUSG00000054387.14	ENST00000367182.8	1595	11	12630	0	6143	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAGTCAGTCACAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	132940449	132919394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374
ENSMUSG00000054387.14_132919395_132946596_1	chr1	-	1408	9	NIC	ENSMUSG00000054387.14	novel	1552	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAGTCAGTCACAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	132946596	132919394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940453_132946514
ENSMUSG00000054387.14_132919395_132946596_2	chr1	-	807	4	ISM	ENSMUSG00000054387.14	ENST00000612738.4	954	5	6508	0	-4	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAGTCAGTCACAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	132946596	132919394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_132919964_132922240_132922322_132940374_132940450_132946514
ENSMUSG00000054387.14_132919395_132953104_1	chr1	-	1326	8	FSM	ENSMUSG00000054387.14	ENST00000614459.4	1326	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAGTCAGTCACAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	132953104	132919394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932431_132946514_132946623_132952983
ENSMUSG00000054387.14_132919395_132953104_2	chr1	-	1144	7	FSM	ENSMUSG00000054387.14	ENST00000616250.4	1144	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAGTCAGTCACAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	132953104	132919394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_132919964_132922240_132922322_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952983
ENSMUSG00000054387.14_132919502_132953068_1	chr1	-	811	5	FSM	ENSMUSG00000054387.14	ENST00000612738.4	954	5	36	107	8	-107	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGACGACATGTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	132953068	132919501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_132919964_132922240_132922322_132940374_132940450_132946514_132946623_132952983
ENSMUSG00000054387.14_132919516_132953068_1	chr1	-	1396	10	NIC	ENSMUSG00000054387.14	novel	1914	11	NA	NA	8	-121	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGAAGACGAGCCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	132953068	132919515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ENSMUSG00000054387.14_132919553_132953068_1	chr1	-	760	5	FSM	ENSMUSG00000054387.14	ENST00000612738.4	954	5	36	158	8	-158	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTGAAAAAAGGCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	132953068	132919552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_132919964_132922240_132922322_132940374_132940450_132946514_132946623_132952983
ENSMUSG00000054387.14_132919571_132953068_1	chr1	-	1341	10	NIC	ENSMUSG00000054387.14	novel	1914	11	NA	NA	8	-176	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGAAGCCGTGTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	132953068	132919570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ENSMUSG00000054387.14_132919613_132953100_1	chr1	-	732	5	FSM	ENSMUSG00000054387.14	ENST00000612738.4	954	5	4	218	4	-218	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGCAGAAAGCTGAAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	132953100	132919612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_132919964_132922240_132922322_132940374_132940450_132946514_132946623_132952983
ENSMUSG00000054387.14_132919619_132953068_1	chr1	-	1358	11	FSM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	86	5661	8	-224	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTGAGCAGAAAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	132953068	132919618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ENSMUSG00000054387.14_132919624_132953099_1	chr1	-	1319	10	NIC	ENSMUSG00000054387.14	novel	1914	11	NA	NA	-5	-229	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTTCTGAGCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	132953099	132919623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ENSMUSG00000054387.14_132931525_132946596_1	chr1	-	454	5	NIC	ENSMUSG00000054387.14	novel	1914	11	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGGATCAAGACTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	132946596	132931524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_-_132931629_132936874_132936931_132938802_132938937_132940374_132940453_132946514
ENSMUSG00000054387.14_132931525_132946596_2	chr1	-	449	5	NNC	ENSMUSG00000054387.14	novel	1914	11	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGGATCAAGACTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	132946596	132931524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_132931629_132936874_132936931_132938802_132938937_132940374_132940453_132946519
ENSMUSG00000054400.17_104977690_104989926_1	chr8	+	317	4	FSM	ENSMUSG00000054400.17	ENSMUST00000034342.13	667	4	197	153	114	-149	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTATTGCCGACTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	104977689	104989926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_104977728_104983916_104984076_104988105_104988202_104989902
ENSMUSG00000054405.15_132262861_132281053_1	chr4	+	1396	9	NNC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	132262860	132281053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_132262970_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ENSMUSG00000054405.15_132262861_132281053_2	chr4	+	1392	9	NNC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	132262860	132281053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277696_132277780_132278845_132278922_132280327
ENSMUSG00000054405.15_132262861_132281053_3	chr4	+	1394	9	NNC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	132262860	132281053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273954_132274020_132277687_132277780_132278845_132278922_132280327
ENSMUSG00000054405.15_132262861_132281053_4	chr4	+	1396	9	NNC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	756	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	132262860	132281053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_132262975_132265497_132265600_132269092_132269145_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ENSMUSG00000054405.15_132262861_132281053_5	chr4	+	1392	9	NNC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	132262860	132281053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_132262975_132265497_132265600_132269101_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ENSMUSG00000054405.15_132262861_132281053_6	chr4	+	1396	9	NNC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	132262860	132281053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280332
ENSMUSG00000054408.10_54975564_54978029_1	chr8	-	921	2	ISM	ENSMUSG00000054408.10	ENSMUST00000067476.9	3466	5	5004	2096	5004	-2096	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTCCTCCTGAACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	54978029	54975563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_54976431_54977975
ENSMUSG00000054408.10_54975882_54982885_1	chr8	-	904	5	FSM	ENSMUSG00000054408.10	ENSMUST00000067476.9	3466	5	148	2414	148	-2414	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACACTTAGAGATCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	54982885	54975881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_54976431_54977975_54978092_54979485_54979563_54981376_54981451_54982797
ENSMUSG00000054408.10_54975999_54983033_1	chr8	-	933	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	0	-2531	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATCATAAAGGGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	54983033	54975998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_54976431_54977975_54978092_54979485_54979557_54981372_54981451_54982797
ENSMUSG00000054408.10_54976021_54983033_1	chr8	-	913	5	FSM	ENSMUSG00000054408.10	ENSMUST00000067476.9	3466	5	0	2553	0	-2553	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTATCTTACGGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	54983033	54976020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_54976431_54977975_54978092_54979485_54979563_54981376_54981451_54982797
ENSMUSG00000054414.5_115735666_115750565_1	chr3	-	4891	3	ISM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	50490	3044	50480	-3044	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCTTTCTGGAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	115750565	115735665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115740361_115747700_115747851_115750519
ENSMUSG00000054414.5_115735942_115778543_1	chr3	-	4917	6	ISM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	22512	3320	22502	-3320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACCGTCTGATTATGG	NA	NA	NA	NA	NA	NA	NA	NA	115778543	115735941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473
ENSMUSG00000054414.5_115735996_115778592_1	chr3	-	4912	6	ISM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	22463	3374	22453	-3374	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTTTTAGTATCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	115778592	115735995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473
ENSMUSG00000054414.5_115736131_115784426_1	chr3	-	4986	8	ISM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	16629	3509	16619	-3509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTAGGAGTCACGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	115784426	115736130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375
ENSMUSG00000054414.5_115736405_115800536_1	chr3	-	4917	10	ISM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	519	3783	509	3309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAGGTGTTCATATATC	NA	NA	NA	NA	NA	NA	NA	NA	115800536	115736404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482
ENSMUSG00000054414.5_115736625_115801055_1	chr3	-	5017	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	0	4003	0	3089	multi-exon	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATCATTCTTCCGAACA	NA	NA	NA	NA	NA	NA	NA	NA	115801055	115736624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ENSMUSG00000054414.5_115739843_115772310_1	chr3	-	507	5	ISM	ENSMUSG00000054414.5	ENST00000370112.8	1648	12	28735	129	28735	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTGTAGAAATAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	115772310	115739842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115740005_115740274_115740361_115747700_115747851_115750519_115750611_115772292
ENSMUSG00000054414.5_115739930_115772363_1	chr3	-	473	5	ISM	ENSMUSG00000054414.5	ENST00000370112.8	1648	12	28682	216	28682	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCCATAAAACCAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	115772363	115739929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115740005_115740274_115740361_115747700_115747851_115750519_115750611_115772292
ENSMUSG00000054414.5_115739986_115772427_1	chr3	-	481	5	ISM	ENSMUSG00000054414.5	ENST00000370112.8	1648	12	28618	272	28618	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCCTTCAACCTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	115772427	115739985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115740005_115740274_115740361_115747700_115747851_115750519_115750611_115772292
ENSMUSG00000054414.5_115775409_115786688_1	chr3	-	532	5	ISM	ENSMUSG00000054414.5	ENST00000370112.8	1648	12	14357	35695	14357	-35695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAAGCAGTTGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	115786688	115775408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574
ENSMUSG00000054414.5_115778506_115800544_1	chr3	-	509	5	ISM	ENSMUSG00000054414.5	ENST00000370112.8	1648	12	501	38792	501	-38792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTCATGGCCATGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	115800544	115778505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482
ENSMUSG00000054423.15_10002582_10029892_1	chr14	+	764	6	ISM	ENSMUSG00000054423.15	ENST00000283269.13	4561	28	355770	66666	355557	-66666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAAAGCGTATCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	10002581	10029892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_10002741_10003762_10003905_10015443_10015600_10019893_10020042_10028847_10028923_10029808
ENSMUSG00000054423.15_9647112_9872393_1	chr14	+	1232	6	ISM	ENSMUSG00000054423.15	ENST00000490353.2	1712	7	87	18591	87	-18591	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAGATGGTTTATATC	NA	NA	NA	NA	NA	NA	NA	NA	9647111	9872393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_9647460_9754367_9754482_9763918_9764252_9853616_9853698_9865907_9866142_9872271
ENSMUSG00000054423.15_9647258_9890750_1	chr14	+	1245	7	FSM	ENSMUSG00000054423.15	ENST00000490353.2	1712	7	233	234	233	-234	multi-exon	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTTCTTGGTAGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	9647257	9890750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_9647460_9754367_9754482_9763918_9764252_9853616_9853698_9865907_9866142_9872271_9872466_9890663
ENSMUSG00000054423.15_9647313_9890807_1	chr14	+	1247	7	FSM	ENSMUSG00000054423.15	ENST00000490353.2	1712	7	288	177	288	-177	multi-exon	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGGCACTAACCATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	9647312	9890807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_9647460_9754367_9754482_9763918_9764252_9853616_9853698_9865907_9866142_9872271_9872466_9890663
ENSMUSG00000054423.15_9647360_9890861_1	chr14	+	1254	7	FSM	ENSMUSG00000054423.15	ENST00000490353.2	1712	7	335	123	335	-123	multi-exon	FALSE	canonical	NA	NA	NA	NA	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTAGGCTTTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	9647359	9890861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_9647460_9754367_9754482_9763918_9764252_9853616_9853698_9865907_9866142_9872271_9872466_9890663
ENSMUSG00000054423.15_9754366_9890984_1	chr14	+	1279	6	ISM	ENSMUSG00000054423.15	ENST00000490353.2	1712	7	107341	0	107341	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACATCAAATGATCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	9754365	9890984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_9754482_9763918_9764252_9853616_9853698_9865907_9866142_9872271_9872466_9890663
ENSMUSG00000054423.15_9764164_10003869_1	chr14	+	2101	17	ISM	ENSMUSG00000054423.15	ENST00000357948.7	5183	27	117449	93334	117139	-92689	internal_fragment	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCTTTGAGCGGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	9764163	10003869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_9764252_9853616_9853698_9865907_9866142_9872271_9872394_9918849_9918962_9923339_9923480_9933375_9933443_9941181_9941291_9947347_9947561_9960530_9960617_9963791_9963980_9977899_9978002_9980222_9980287_9980658_9980783_9996247_9996355_10002583_10002741_10003762
ENSMUSG00000054423.15_9764205_9923479_1	chr14	+	736	6	ISM	ENSMUSG00000054423.15	ENST00000283269.13	4561	28	117393	173079	117180	32495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTCTTTCCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	9764204	9923479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_9764252_9853616_9853698_9865907_9866142_9872271_9872394_9918849_9918962_9923339
ENSMUSG00000054423.15_9865907_9941290_1	chr14	+	785	6	ISM	ENSMUSG00000054423.15	ENST00000283269.13	4561	28	219095	155268	218882	50306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCCACCTCTGCCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	9865906	9941290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_9866142_9872271_9872394_9918849_9918962_9923339_9923480_9933375_9933443_9941181
ENSMUSG00000054423.15_9923362_9963883_1	chr14	+	736	6	ISM	ENSMUSG00000054423.15	ENST00000283269.13	4561	28	276550	132675	276337	72899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTGCTGGAACGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	9923361	9963883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_9923480_9933375_9933443_9941181_9941291_9947347_9947561_9960530_9960668_9963791
ENSMUSG00000054423.15_9947422_10096233_1	chr14	+	2082	17	ISM	ENSMUSG00000054423.15	ENST00000357948.7	5183	27	300707	970	300397	-325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCTGTCAACCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	9947421	10096233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_9947561_9960530_9960617_9963791_9963980_9977899_9978002_9980222_9980287_9980658_9980783_9996247_9996355_10002583_10002741_10003762_10003905_10015443_10015600_10019893_10020042_10028847_10028923_10029808_10029893_10051725_10051759_10058101_10058210_10093053_10093159_10095969
ENSMUSG00000054428.13_132258096_132260699_1	chr4	-	132	2	FSM	ENSMUSG00000054428.13	ENSMUST00000152993.8	462	2	100	230	100	-230	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGAAGATGAGATTGACC	NA	NA	NA	NA	NA	NA	NA	NA	132260699	132258095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_132258135_132260606
ENSMUSG00000054428.13_132260607_132260912_1	chr4	-	208	2	NNC	ENSMUSG00000054428.13	novel	539	3	NA	NA	58	-2741	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCCCACCTGGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	132260912	132260606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_132260691_132260788
ENSMUSG00000054434.15_123214338_123254745_1	chr5	+	1097	12	FSM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	0	1067	0	-327	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAATTTTCTGACCACGCT	NA	NA	NA	NA	NA	NA	NA	NA	123214337	123254745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
ENSMUSG00000054434.15_123236239_123254901_1	chr5	+	1031	11	ISM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	21901	911	-6243	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTAGCCATGGGCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	123236238	123254901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
ENSMUSG00000054434.15_123236267_123255072_1	chr5	+	1174	11	ISM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	21929	740	-6215	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCCGAGGCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	123236266	123255072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
ENSMUSG00000054434.15_123236323_123255072_1	chr5	+	1118	11	ISM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	21985	740	-6159	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCCGAGGCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	123236322	123255072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
ENSMUSG00000054434.15_123242482_123255162_1	chr5	+	776	5	FSM	ENSMUSG00000054434.15	ENST00000540377.1	868	5	0	92	0	90	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAACCCCTCTCTTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	123242481	123255162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_123242575_123253162_123253256_123253723_123253789_123254264_123254334_123254706
ENSMUSG00000054434.15_123252630_123255509_1	chr5	+	1093	5	ISM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	38292	303	10148	255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACCAGAGGGCGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	123252629	123255509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
ENSMUSG00000054434.15_123254265_123255812_1	chr5	+	1175	2	ISM	ENSMUSG00000054434.15	ENST00000540377.1	868	5	11783	-558	11783	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCCTGCCCAGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	123254264	123255812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_123254334_123254706
ENSMUSG00000054452.11_81395328_81401964_1	chr10	+	1179	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	0	232	0	-232	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTTCCCCAAATAAACGT	NA	NA	NA	NA	NA	NA	NA	NA	81395327	81401964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ENSMUSG00000054452.11_81395328_81402008_1	chr10	+	1217	7	NNC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	0	-188	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCTTTCTTGTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	81395327	81402008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401131_81401201_81401305
ENSMUSG00000054452.11_81395328_81402014_1	chr10	+	1229	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	0	182	0	-182	multi-exon	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTGTGCCAGTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	81395327	81402014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ENSMUSG00000054452.11_81395328_81402017_1	chr10	+	1232	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	0	179	0	-179	multi-exon	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGCCAGTATTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	81395327	81402017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ENSMUSG00000054452.11_81395439_81402049_1	chr10	+	1147	7	NNC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	111	-147	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGAAAAGAAGGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	81395438	81402049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401131_81401201_81401305
ENSMUSG00000054452.11_81395460_81402077_1	chr10	+	1160	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	132	119	132	-119	multi-exon	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCATAGGGTTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	81395459	81402077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ENSMUSG00000054452.11_81397052_81402196_1	chr10	+	1231	6	NNC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	1724	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTGTCCCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	81397051	81402196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401131_81401201_81401305
ENSMUSG00000054452.11_81397052_81402196_2	chr10	+	1237	6	ISM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	1724	0	1724	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTGTCCCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	81397051	81402196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ENSMUSG00000054453.12_9728362_9780193_1	chrX	+	817	4	ISM	ENSMUSG00000054453.12	ENST00000297875.7	2681	17	34	80604	34	-80589	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGCAAGTCAATGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	9728361	9780193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_9728436_9751537_9752019_9771756_9771967_9780141
ENSMUSG00000054453.12_9751536_9781853_1	chrX	+	918	4	ISM	ENSMUSG00000054453.12	ENSMUST00000067529.9	2301	17	-325	78929	-325	-78929	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATCTCTAGAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	9751535	9781853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_9752019_9771756_9771967_9780141_9780258_9781744
ENSMUSG00000054453.12_9751727_9799058_1	chrX	+	814	5	ISM	ENSMUSG00000054453.12	ENSMUST00000067529.9	2301	17	-134	61724	-134	-61724	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAGTCAAAATCTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	9751726	9799058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_9752019_9771756_9771967_9780141_9780258_9781744_9781854_9798971
ENSMUSG00000054453.12_9751861_9815088_1	chrX	+	908	7	ISM	ENSMUSG00000054453.12	ENSMUST00000067529.9	2301	17	0	45694	0	-45694	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACACCTGTGAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	9751860	9815088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_9752019_9771756_9771967_9780141_9780258_9781744_9781854_9798971_9799107_9809278_9809421_9815050
ENSMUSG00000054453.12_9771790_9817837_1	chrX	+	830	7	ISM	ENSMUSG00000054453.12	ENSMUST00000067529.9	2301	17	19929	42945	19929	-42945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTGAGTCATTTGCG	NA	NA	NA	NA	NA	NA	NA	NA	9771789	9817837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_9771967_9780141_9780258_9781744_9781854_9798971_9799107_9809278_9809421_9815050_9815181_9817816
ENSMUSG00000054453.12_9771900_9822618_1	chrX	+	827	8	ISM	ENSMUSG00000054453.12	ENSMUST00000067529.9	2301	17	20039	38164	20039	-38164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTGTTGACTTAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	9771899	9822618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_9771967_9780141_9780258_9781744_9781854_9798971_9799107_9809278_9809421_9815050_9815181_9817816_9817924_9822597
ENSMUSG00000054453.12_9780142_9826269_1	chrX	+	846	8	ISM	ENSMUSG00000054453.12	ENSMUST00000086165.4	2235	16	28281	34513	28281	-34513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAGTGTTTACAGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	9780141	9826269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_9780258_9781744_9781854_9798971_9799107_9809278_9809421_9815050_9815181_9817816_9817924_9822597_9822688_9826252
ENSMUSG00000054453.12_9780209_9826314_1	chrX	+	824	8	ISM	ENSMUSG00000054453.12	ENSMUST00000086165.4	2235	16	28348	34468	28348	-34468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGGTGAGATCCTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	9780208	9826314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_9780258_9781744_9781854_9798971_9799107_9809278_9809421_9815050_9815181_9817816_9817924_9822597_9822688_9826252
ENSMUSG00000054453.12_9781743_9826431_1	chrX	+	894	7	ISM	ENSMUSG00000054453.12	ENSMUST00000086165.4	2235	16	29882	34351	29882	-34351	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCACGGAGGATGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	9781742	9826431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_9781854_9798971_9799107_9809278_9809421_9815050_9815181_9817816_9817924_9822597_9822688_9826252
ENSMUSG00000054453.12_9799063_9829867_1	chrX	+	830	8	ISM	ENSMUSG00000054453.12	ENSMUST00000086165.4	2235	16	47202	30915	47202	-30915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTCTCAGTCTGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	9799062	9829867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_9799107_9809278_9809421_9815050_9815181_9817816_9817924_9822597_9822688_9826252_9826432_9827971_9828072_9829829
ENSMUSG00000054453.12_9809277_9829991_1	chrX	+	912	7	ISM	ENSMUSG00000054453.12	ENSMUST00000086165.4	2235	16	57416	30791	57416	-30791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAAATACTTCCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	9809276	9829991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_9809421_9815050_9815181_9817816_9817924_9822597_9822688_9826252_9826432_9827971_9828072_9829829
ENSMUSG00000054453.12_9815051_9853143_1	chrX	+	877	7	ISM	ENSMUSG00000054453.12	ENSMUST00000086165.4	2235	16	63190	7639	63190	-7639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGCGTAAAAATCAATATC	NA	NA	NA	NA	NA	NA	NA	NA	9815050	9853143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_9815181_9817816_9817924_9822597_9822688_9826252_9826432_9827971_9828072_9829829_9829992_9853034
ENSMUSG00000054453.12_9817814_9854925_1	chrX	+	886	7	ISM	ENSMUSG00000054453.12	ENSMUST00000086165.4	2235	16	65953	5857	65953	-5857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTTGTTTTAGCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	9817813	9854925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_9817924_9822597_9822688_9826252_9826432_9827971_9828072_9829829_9829992_9853034_9853144_9854789
ENSMUSG00000054453.12_9822641_9859205_1	chrX	+	811	7	ISM	ENSMUSG00000054453.12	ENSMUST00000086165.4	2235	16	70780	1577	70780	-1577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATACGTTCATATTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	9822640	9859205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_9822688_9826252_9826432_9827971_9828072_9829829_9829992_9853034_9853144_9854789_9854926_9859127
ENSMUSG00000054453.12_9826253_9859336_1	chrX	+	895	6	ISM	ENSMUSG00000054453.12	ENSMUST00000067529.9	2301	17	74392	1446	74392	-1446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGACCTGGGCGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	9826252	9859336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_9826432_9827971_9828072_9829829_9829992_9853034_9853144_9854789_9854926_9859127
ENSMUSG00000054453.12_9826374_9860782_1	chrX	+	917	7	ISM	ENSMUSG00000054453.12	ENSMUST00000067529.9	2301	17	74513	0	74513	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGACCAGTTCTCCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	9826373	9860782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_9826432_9827971_9828072_9829829_9829992_9853034_9853144_9854789_9854926_9859127_9859337_9860639
ENSMUSG00000054455.6_173579508_173621047_1	chr2	+	1381	3	FSM	ENSMUSG00000054455.6	ENST00000395802.7	1512	3	28	103	28	-103	multi-exon	FALSE	canonical	NA	NA	NA	NA	859	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTGACTGTGAATTAATT	NA	NA	NA	NA	NA	NA	NA	NA	173579507	173621047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_173579544_173603909_173604063_173619855
ENSMUSG00000054474.16_71105640_71108956_1	chr6	-	544	3	ISM	ENSMUSG00000054474.16	ENST00000343544.8	1390	7	9480	-17	9372	17	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTAGTGAACCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	71108956	71105639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_71105837_71108508_71108758_71108858
ENSMUSG00000054474.16_71105640_71115710_1	chr6	-	504	3	ISM	ENSMUSG00000054474.16	ENST00000449349.5	884	5	2618	-17	2618	17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	869	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTAGTGAACCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	71115710	71105639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_71105837_71111064_71111296_71115634
ENSMUSG00000054474.16_71105791_71111134_1	chr6	-	514	4	ISM	ENSMUSG00000054474.16	ENST00000343544.8	1390	7	7302	134	7194	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCCAGGCGGCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	71111134	71105790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_71105837_71108508_71108758_71108858_71109008_71111064
ENSMUSG00000054474.16_71105801_71116761_1	chr6	-	449	4	ISM	ENSMUSG00000054474.16	ENST00000449349.5	884	5	1567	144	1567	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCCAGAAGCAGTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	71116761	71105800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_71105837_71111064_71111296_71115634_71115788_71116732
ENSMUSG00000054474.16_71108632_71118226_1	chr6	-	877	6	ISM	ENSMUSG00000054474.16	ENST00000343544.8	1390	7	210	2975	102	-2975	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1693	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGTAATCAGTCACACCC	NA	NA	NA	NA	NA	NA	NA	NA	71118226	71108631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_71108758_71108858_71109008_71111064_71111296_71115634_71115788_71116732_71116928_71118203
ENSMUSG00000054474.16_71108750_71118256_1	chr6	-	789	6	ISM	ENSMUSG00000054474.16	ENST00000343544.8	1390	7	180	3093	72	-3093	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1524	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATGGAGAGGATCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	71118256	71108749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_71108758_71108858_71109008_71111064_71111296_71115634_71115788_71116732_71116928_71118203
ENSMUSG00000054474.16_71108750_71118332_1	chr6	-	865	6	ISM	ENSMUSG00000054474.16	ENST00000343544.8	1390	7	104	3093	-4	-3093	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1976	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATGGAGAGGATCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	71118332	71108749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_71108758_71108858_71109008_71111064_71111296_71115634_71115788_71116732_71116928_71118203
ENSMUSG00000054474.16_71111110_71116880_1	chr6	-	487	3	ISM	ENSMUSG00000054474.16	ENST00000449349.5	884	5	1448	5453	1448	-5453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGAGGTGGTAGTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	71116880	71111109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_71111296_71115634_71115788_71116732
ENSMUSG00000054477.17_45693554_45788356_1	chr18	+	325	3	ISM	ENSMUSG00000054477.17	ENSMUST00000169783.2	1625	7	333	30593	333	-30273	5prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAACACATACTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	45693553	45788356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_45693692_45694287_45694384_45788265
ENSMUSG00000054477.17_45693619_45788406_1	chr18	+	310	3	ISM	ENSMUSG00000054477.17	ENSMUST00000169783.2	1625	7	398	30543	398	-30223	5prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTTTTCCCCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	45693618	45788406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_45693692_45694287_45694384_45788265
ENSMUSG00000054477.17_45694314_45803386_1	chr18	+	313	3	ISM	ENSMUSG00000054477.17	ENSMUST00000169783.2	1625	7	1093	15563	1093	-15243	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAAAGAGTAAGTAGACC	NA	NA	NA	NA	NA	NA	NA	NA	45694313	45803386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_45694384_45788265_45788407_45803284
ENSMUSG00000054484.15_120807498_120837394_1	chr2	+	1982	14	FSM	ENSMUSG00000054484.15	ENSMUST00000067582.14	2921	14	0	939	0	-731	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATACTGGAAGATTATAC	NA	NA	NA	NA	NA	NA	NA	NA	120807497	120837394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_120807960_120808179_120808292_120809611_120809750_120810953_120811000_120814814_120814957_120817063_120817189_120817316_120817440_120820811_120820968_120823958_120824119_120826886_120827001_120829554_120829640_120832977_120833083_120835162_120835282_120837299
ENSMUSG00000054484.15_120807619_120837524_1	chr2	+	1991	14	FSM	ENSMUSG00000054484.15	ENSMUST00000067582.14	2921	14	121	809	121	-601	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATTGCTGACACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	120807618	120837524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_120807960_120808179_120808292_120809611_120809750_120810953_120811000_120814814_120814957_120817063_120817189_120817316_120817440_120820811_120820968_120823958_120824119_120826886_120827001_120829554_120829640_120832977_120833083_120835162_120835282_120837299
ENSMUSG00000054484.15_120807736_120837534_1	chr2	+	1884	14	FSM	ENSMUSG00000054484.15	ENSMUST00000067582.14	2921	14	238	799	238	-591	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACCTGTGCTCATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	120807735	120837534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_120807960_120808179_120808292_120809611_120809750_120810953_120811000_120814814_120814957_120817063_120817189_120817316_120817440_120820811_120820968_120823958_120824119_120826886_120827001_120829554_120829640_120832977_120833083_120835162_120835282_120837299
ENSMUSG00000054484.15_120809628_120837882_1	chr2	+	1880	12	ISM	ENSMUSG00000054484.15	ENSMUST00000110686.3	2417	13	1614	243	1614	-243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTGTCCCTTGGTACT	NA	NA	NA	NA	NA	NA	NA	NA	120809627	120837882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120809750_120810953_120811000_120814814_120814957_120817063_120817189_120817316_120817440_120820811_120820968_120823958_120824119_120826886_120827001_120829554_120829640_120832977_120833083_120835162_120835282_120837299
ENSMUSG00000054484.15_120817099_120838333_1	chr2	+	1986	9	ISM	ENSMUSG00000054484.15	ENSMUST00000110686.3	2417	13	9085	-208	9085	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATCTGCAATGTTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	120817098	120838333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_120817189_120817316_120817440_120820811_120820968_120823958_120824119_120826886_120827001_120829554_120829640_120832977_120833083_120835162_120835282_120837299
ENSMUSG00000054499.10_24902847_24918301_1	chr7	-	859	4	ISM	ENSMUSG00000054499.10	ENSMUST00000058702.7	1828	5	983	582	983	-581	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTCCATGATGGCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	24918301	24902846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225
ENSMUSG00000054582.5_163869528_163874448_1	chr2	+	358	4	ISM	ENSMUSG00000054582.5	ENSMUST00000067715.5	2354	14	2158	18010	2096	-17096	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCCCGGGGCTTCGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	163869527	163874448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163869589_163873118_163873235_163874099_163874240_163874407
ENSMUSG00000054582.5_163873195_163877229_1	chr2	+	340	4	ISM	ENSMUSG00000054582.5	ENST00000217073.7	1730	13	5763	14315	5763	-14315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGGCAGAACGGCAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	163873194	163877229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163873235_163874099_163874240_163874407_163874503_163877164
ENSMUSG00000054582.5_163874178_163879074_1	chr2	+	339	4	ISM	ENSMUSG00000054582.5	ENST00000217073.7	1730	13	6746	12470	6746	-12470	internal_fragment	TRUE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGCTGAAGGAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	163874177	163879074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163874240_163874407_163874503_163877164_163877303_163879030
ENSMUSG00000054582.5_163874407_163884240_1	chr2	+	334	4	ISM	ENSMUSG00000054582.5	ENST00000217073.7	1730	13	6975	7304	6975	-7304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAGAAAGTAGCCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	163874406	163884240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163874503_163877164_163877303_163879030_163879127_163884236
ENSMUSG00000054582.5_163884406_163887889_1	chr2	+	395	4	ISM	ENSMUSG00000054582.5	ENST00000217073.7	1730	13	16974	3655	16974	-3655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGGTCTGCTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	163884405	163887889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163884486_163885469_163885561_163886183_163886301_163887782
ENSMUSG00000054582.5_163885499_163889457_1	chr2	+	343	4	ISM	ENSMUSG00000054582.5	ENST00000217073.7	1730	13	18067	2087	18067	-2087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCTGCACCCCTACACGA	NA	NA	NA	NA	NA	NA	NA	NA	163885498	163889457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163885561_163886183_163886301_163887782_163887890_163889400
ENSMUSG00000054604.8_64672359_64677463_1	chr16	+	2018	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	0	2407	0	-2397	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAACTTTATAGTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	64672358	64677463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_64672600_64673161_64673389_64675913
ENSMUSG00000054604.8_64672543_64677578_1	chr16	+	1949	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	184	2292	184	-2282	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAGCTCAGAGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	64672542	64677578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_64672600_64673161_64673389_64675913
ENSMUSG00000054604.8_64673217_64677684_1	chr16	+	1943	2	ISM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	858	2186	858	-2176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTGAAAACATTGAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	64673216	64677684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_64673389_64675913
ENSMUSG00000054604.8_64673280_64677752_1	chr16	+	1948	2	ISM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	921	2118	921	-2108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTTGAGGTCATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	64673279	64677752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_64673389_64675913
ENSMUSG00000054604.8_64673336_64677799_1	chr16	+	1939	2	ISM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	977	2071	977	-2061	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTAATAGAAAATAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	64673335	64677799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_64673389_64675913
ENSMUSG00000054604.8_64677387_64678193_1	chr16	+	653	2	FSM	ENSMUSG00000054604.8	ENST00000398392.2	3872	2	1552	1667	1552	-1667	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACACAGACCAGCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	64677386	64678193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_64677819_64677972
ENSMUSG00000054604.8_64677424_64678261_1	chr16	+	684	2	FSM	ENSMUSG00000054604.8	ENST00000398392.2	3872	2	1589	1599	1589	-1599	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAAATTGCCTAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	64677423	64678261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_64677819_64677972
ENSMUSG00000054604.8_64677607_64678468_1	chr16	+	708	2	FSM	ENSMUSG00000054604.8	ENST00000398392.2	3872	2	1772	1392	1772	-1392	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATAATTCACCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	64677606	64678468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_64677819_64677972
ENSMUSG00000054662.9_140683961_140687109_1	chr7	-	567	6	NNC	ENSMUSG00000054662.9	novel	1353	12	NA	NA	1189	-943	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAAGATGGTCAGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	140687109	140683960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_140684058_140684150_140684298_140684395_140684494_140684581_140684640_140686675_140686813_140687079
ENSMUSG00000054662.9_140684269_140687349_1	chr7	-	516	6	ISM	ENSMUSG00000054662.9	ENST00000332826.7	1353	12	949	1251	949	-1251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTTCCAAACATGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	140687349	140684268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_140684298_140684395_140684494_140684581_140684640_140686675_140686813_140687079_140687233_140687308
ENSMUSG00000054662.9_140684394_140687415_1	chr7	-	555	5	ISM	ENSMUSG00000054662.9	ENST00000332826.7	1353	12	883	1376	883	-1376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCTCTTTCCATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	140687415	140684393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_140684494_140684581_140684640_140686675_140686813_140687079_140687233_140687308
ENSMUSG00000054662.9_140684582_140687597_1	chr7	-	537	5	ISM	ENSMUSG00000054662.9	ENST00000332826.7	1353	12	701	1564	701	-1564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTCTGTCCTGAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	140687597	140684581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_140684640_140686675_140686813_140687079_140687233_140687308_140687414_140687513
ENSMUSG00000054662.9_140686763_140688000_1	chr7	-	494	6	ISM	ENSMUSG00000054662.9	ENST00000332826.7	1353	12	298	3745	298	-3745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGGAAGTTCACTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	140688000	140686762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_140686813_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958
ENSMUSG00000054662.9_140687092_140688177_1	chr7	-	501	6	ISM	ENSMUSG00000054662.9	ENST00000332826.7	1353	12	121	4074	121	-4074	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATGACTAAGGTAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	140688177	140687091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163
ENSMUSG00000054662.9_140687150_140688232_1	chr7	-	498	6	ISM	ENSMUSG00000054662.9	ENST00000332826.7	1353	12	66	4132	66	-4132	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGACCACCGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	140688232	140687149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163
ENSMUSG00000054662.9_140687197_140688292_1	chr7	-	511	6	ISM	ENSMUSG00000054662.9	ENST00000332826.7	1353	12	6	4179	6	-4179	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTACCGTGTGCTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	140688292	140687196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163
ENSMUSG00000054675.6_113931790_113938507_1	chr5	-	2172	2	FSM	ENSMUSG00000054675.6	ENSMUST00000067853.6	2242	2	70	0	70	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTCTGGATTATCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	113938507	113931789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_113933815_113938360
ENSMUSG00000054693.15_70586298_70685759_1	chr9	+	600	2	FSM	ENSMUSG00000054693.15	ENST00000561288.1	549	2	-50	-1	19	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGCTGGGAGGCTCGAC	NA	NA	NA	NA	NA	NA	NA	NA	70586297	70685759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_70586542_70685403
ENSMUSG00000054693.15_70586447_70651196_1	chr9	+	689	6	ISM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	168	36315	99	-34562	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTGAAAGAAATACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	70586446	70651196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132
ENSMUSG00000054693.15_70610625_70653594_1	chr9	+	706	6	ISM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	24346	33917	24277	-32164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACGCATAAGAGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	70610624	70653594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515
ENSMUSG00000054693.15_70625973_70655455_1	chr9	+	683	6	ISM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	39694	32056	39625	-30303	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCATGATGACTACTGC	NA	NA	NA	NA	NA	NA	NA	NA	70625972	70655455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364
ENSMUSG00000054693.15_70651165_70669031_1	chr9	+	729	5	ISM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	64886	18480	64817	-16727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAACTGTTTTGTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	70651164	70669031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864
ENSMUSG00000054693.15_70655487_70674273_1	chr9	+	681	5	ISM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	69208	13238	69139	-11485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCTGATCCCAAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	70655486	70674273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153
ENSMUSG00000054693.15_70668919_70676185_1	chr9	+	686	5	ISM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	82640	11326	82571	-9573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTTTCATGCGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	70668918	70676185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073
ENSMUSG00000054702.15_79591907_79603003_1	chr1	-	333	2	ISM	ENSMUSG00000054702.15	ENST00000396653.2	451	3	46682	0	46682	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGCCTGGGGTAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	79603003	79591906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_79592058_79602821
ENSMUSG00000054702.15_79591998_79649682_1	chr1	-	355	3	NIC	ENSMUSG00000054702.15	novel	2876	5	NA	NA	3	-91	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	850	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAGGTGGAGAAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	79649682	79591997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_-_79592058_79602823_79603003_79649566
ENSMUSG00000054716.5_126843660_126853813_1	chr7	+	1121	3	FSM	ENSMUSG00000054716.5	ENST00000434417.1	1121	3	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGACTGGCACCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	126843659	126853813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126843781_126844143_126844307_126852976
ENSMUSG00000054716.5_126843660_126853813_2	chr7	+	1120	3	NNC	ENSMUSG00000054716.5	novel	1121	3	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGACTGGCACCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	126843659	126853813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_126843781_126844144_126844307_126852976
ENSMUSG00000054716.5_126843660_126853813_3	chr7	+	1113	3	NNC	ENSMUSG00000054716.5	novel	1121	3	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGACTGGCACCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	126843659	126853813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_126843781_126844143_126844307_126852984
ENSMUSG00000054717.8_57964941_57969035_1	chr8	+	2627	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGTTCTGTTTTGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	57964940	57969035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_57965045_57965616_57965783_57966095_57966242_57966323_57966499_57966999
ENSMUSG00000054723.7_57021791_57023707_1	chr17	-	1101	2	FSM	ENSMUSG00000054723.7	ENSMUST00000067931.7	2226	2	270	855	270	-855	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCCTCAATGTCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	57023707	57021790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_57022818_57023633
ENSMUSG00000054723.7_57022007_57023977_1	chr17	-	1155	2	FSM	ENSMUSG00000054723.7	ENSMUST00000067931.7	2226	2	0	1071	0	-1071	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCCAGGCTTCCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	57023977	57022006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_57022818_57023633
ENSMUSG00000054728.18_43070264_43213183_1	chr13	+	631	5	ISM	ENSMUSG00000054728.18	ENST00000675203.1	2162	13	253	75611	253	-75482	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCCCTTCACAAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	43070263	43213183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_43070344_43110092_43110258_43190925_43191007_43210654_43210823_43213046
ENSMUSG00000054728.18_43213152_43248432_1	chr13	+	632	3	ISM	ENSMUSG00000054728.18	ENST00000675203.1	2162	13	143141	40362	-63181	-40233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAGGAAGATGAAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	43213151	43248432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_43213254_43231130_43231453_43248224
ENSMUSG00000054733.10_64360627_64471312_1	chr14	-	318	3	ISM	ENSMUSG00000054733.10	ENST00000441698.6	458	4	79893	0	79893	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGTCCCTGAAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	64471312	64360626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_64360803_64447876_64447984_64471277
ENSMUSG00000054733.10_64471322_64654877_1	chr14	-	381	5	ISM	ENSMUSG00000054733.10	ENST00000528246.5	1169	7	461	110695	-149	-110695	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGCTCAAGGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	64654877	64471321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_64471383_64522512_64522633_64551135_64551205_64654530_64654605_64654820
ENSMUSG00000054733.10_64522562_64654928_1	chr14	-	322	4	ISM	ENSMUSG00000054733.10	ENST00000528246.5	1169	7	410	161935	-200	-161935	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGGAGGCCACACACG	NA	NA	NA	NA	NA	NA	NA	NA	64654928	64522561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_64522633_64551135_64551205_64654530_64654605_64654820
ENSMUSG00000054733.10_64522611_64654986_1	chr14	-	331	4	ISM	ENSMUSG00000054733.10	ENST00000528246.5	1169	7	352	161984	-258	-161984	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGCAAGTTCTGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	64654986	64522610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_64522633_64551135_64551205_64654530_64654605_64654820
ENSMUSG00000054733.10_64678247_64689905_1	chr14	-	364	3	ISM	ENSMUSG00000054733.10	ENSMUST00000067927.9	1860	11	3447	318173	3447	-317620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTACGGAGGATGGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	64689905	64678246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_64678476_64688412_64688488_64689845
ENSMUSG00000054766.14_29952036_29961257_1	chr2	+	1321	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	171	1332	171	645	multi-exon	FALSE	canonical	NA	NA	NA	NA	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTGGAGGGCGCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	29952035	29961257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ENSMUSG00000054766.14_29952106_29961441_1	chr2	+	1435	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	241	1148	241	829	multi-exon	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGGTATAGACGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	29952105	29961441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ENSMUSG00000054766.14_29952180_29961441_1	chr2	+	1361	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	315	1148	315	829	multi-exon	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGGTATAGACGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	29952179	29961441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ENSMUSG00000054766.14_29956641_29961577_1	chr2	+	1649	8	FSM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	173	1012	173	965	multi-exon	FALSE	canonical	NA	NA	NA	NA	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTCTCTCCTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	29956640	29961577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ENSMUSG00000054766.14_29956708_29961638_1	chr2	+	1643	8	FSM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	240	951	240	-951	multi-exon	FALSE	canonical	NA	NA	NA	NA	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGTTTTATTTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	29956707	29961638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ENSMUSG00000054766.14_29957205_29960612_1	chr2	+	762	7	FSM	ENSMUSG00000054766.14	ENST00000372688.8	790	7	28	0	28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACACCCAAGCCCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	29957204	29960612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_29957217_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452
ENSMUSG00000054766.14_29958280_29960315_1	chr2	+	521	5	FSM	ENSMUSG00000054766.14	ENST00000479329.1	477	5	-4	-40	-4	40	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGAGGTCATCAAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	29958279	29960315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_29958339_29958989_29959115_29959338_29959443_29959529_29959644_29960196
ENSMUSG00000054766.14_29958280_29961866_1	chr2	+	1674	7	ISM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	1812	723	-4	-723	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATCACGTCAAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	29958279	29961866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ENSMUSG00000054766.14_29958969_29961976_1	chr2	+	1728	6	ISM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	2501	613	685	-613	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCGTACTGAGTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	29958968	29961976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ENSMUSG00000054766.14_29960468_29962178_1	chr2	+	1380	2	ISM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	4000	411	2184	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGGGTCAGCAGTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	29960467	29962178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29960600_29960930
ENSMUSG00000054808.16_28592673_28593991_1	chr7	-	1206	2	ISM	ENSMUSG00000054808.16	ENSMUST00000068045.14	3877	21	67774	0	67703	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTCATCTTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	28593991	28592672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28593813_28593925
ENSMUSG00000054808.16_28592891_28594916_1	chr7	-	1141	3	ISM	ENSMUSG00000054808.16	ENSMUST00000068045.14	3877	21	66849	218	66778	189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGTCCCTCCTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	28594916	28592890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28593813_28593925_28594085_28594856
ENSMUSG00000054808.16_28593136_28596480_1	chr7	-	1244	5	ISM	ENSMUSG00000054808.16	ENST00000424234.7	2915	21	65214	-428	65214	-56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGACCAAAACCAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	28596480	28593135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300
ENSMUSG00000054808.16_28593352_28597408_1	chr7	-	1163	6	ISM	ENSMUSG00000054808.16	ENST00000424234.7	2915	21	64286	-212	64286	212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCAAAGCCTCTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	28597408	28593351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273
ENSMUSG00000054808.16_28593657_28598153_1	chr7	-	1291	9	ISM	ENSMUSG00000054808.16	ENST00000424234.7	2915	21	63541	93	63541	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCCCTTGGCCACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	28598153	28593656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044
ENSMUSG00000054808.16_28594024_28601383_1	chr7	-	1119	9	ISM	ENSMUSG00000054808.16	ENST00000424234.7	2915	21	60311	460	60311	-460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCAAGCCTTCATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	28601383	28594023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301
ENSMUSG00000054808.16_28594834_28604033_1	chr7	-	1218	9	ISM	ENSMUSG00000054808.16	ENST00000424234.7	2915	21	57661	1270	57661	-1270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGACATTAACTGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	28604033	28594833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965
ENSMUSG00000054808.16_28595613_28604700_1	chr7	-	1146	9	ISM	ENSMUSG00000054808.16	ENST00000424234.7	2915	21	56994	2049	56994	-2049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAATGAGGTGGAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	28604700	28595612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649
ENSMUSG00000054808.16_28596459_28606431_1	chr7	-	1155	9	ISM	ENSMUSG00000054808.16	ENST00000424234.7	2915	21	55263	2895	55263	-2895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAACGGGACTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	28606431	28596458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396
ENSMUSG00000054808.16_28597352_28610939_1	chr7	-	1138	9	ISM	ENSMUSG00000054808.16	ENSMUST00000217157.2	3530	22	50826	4272	50755	-3788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCCAATGAGCACCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	28610939	28597351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914
ENSMUSG00000054808.16_28597491_28611746_1	chr7	-	1227	9	ISM	ENSMUSG00000054808.16	ENSMUST00000217157.2	3530	22	50019	4411	49948	-3927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGCTCTCTGACATGC	NA	NA	NA	NA	NA	NA	NA	NA	28611746	28597490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664
ENSMUSG00000054808.16_28597602_28612846_1	chr7	-	1160	10	ISM	ENSMUSG00000054808.16	ENSMUST00000217157.2	3530	22	48919	4522	48848	-4038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCACAAGGAGGCCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	28612846	28597601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802
ENSMUSG00000054808.16_28597626_28611686_1	chr7	-	1032	9	ISM	ENSMUSG00000054808.16	ENST00000424234.7	2915	21	50008	4062	50008	-4062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGCGTGAGGCCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	28611686	28597625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664
ENSMUSG00000054808.16_28597853_28615620_1	chr7	-	1155	11	ISM	ENSMUSG00000054808.16	ENSMUST00000217157.2	3530	22	46145	4773	46074	-4289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGGCTGCACCCTTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	28615620	28597852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584
ENSMUSG00000054808.16_28598045_28615610_1	chr7	-	1093	10	ISM	ENSMUSG00000054808.16	ENST00000424234.7	2915	21	46084	4481	46084	-4481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGGGGTGGCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	28615610	28598044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584
ENSMUSG00000054808.16_28598045_28618158_1	chr7	-	1216	11	ISM	ENSMUSG00000054808.16	ENSMUST00000217157.2	3530	22	43607	4965	43536	-4481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGGGGTGGCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	28618158	28598044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096
ENSMUSG00000054808.16_28601340_28618119_1	chr7	-	1030	10	ISM	ENSMUSG00000054808.16	ENST00000424234.7	2915	21	43575	7776	43575	-7776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTGGAGCAGATTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	28618119	28601339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096
ENSMUSG00000054808.16_28601340_28618152_1	chr7	-	1063	10	ISM	ENSMUSG00000054808.16	ENST00000424234.7	2915	21	43542	7776	43542	-7776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTGGAGCAGATTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	28618152	28601339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096
ENSMUSG00000054808.16_28601340_28618455_1	chr7	-	1204	11	ISM	ENSMUSG00000054808.16	ENSMUST00000217157.2	3530	22	43310	8260	43239	-7776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTGGAGCAGATTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	28618455	28601339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378
ENSMUSG00000054808.16_28603965_28618493_1	chr7	-	1130	10	ISM	ENSMUSG00000054808.16	ENST00000424234.7	2915	21	43201	10401	43201	-10401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGCTTCCCATGCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	28618493	28603964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378
ENSMUSG00000054808.16_28603965_28661532_1	chr7	-	1219	11	ISM	ENSMUSG00000054808.16	ENSMUST00000217157.2	3530	22	233	10885	162	-10401	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGCTTCCCATGCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	28661532	28603964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ENSMUSG00000054808.16_28604649_28661532_1	chr7	-	1071	10	ISM	ENSMUSG00000054808.16	ENST00000424234.7	2915	21	162	11085	162	-11085	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTGACTGCCACCCACA	NA	NA	NA	NA	NA	NA	NA	NA	28661532	28604648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ENSMUSG00000054808.16_28604649_28661648_1	chr7	-	1187	10	ISM	ENSMUSG00000054808.16	ENSMUST00000217157.2	3530	22	117	11569	46	-11085	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTGACTGCCACCCACA	NA	NA	NA	NA	NA	NA	NA	NA	28661648	28604648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ENSMUSG00000054823.18_26163394_26166830_1	chr8	+	215	3	ISM	ENSMUSG00000054823.18	ENSMUST00000155861.8	2834	10	71777	400	-20766	-400	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGACTTGGAGTCTCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	26163393	26166830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_26163451_26165712_26165759_26166718
ENSMUSG00000054836.13_110134272_110150037_1	chr9	+	919	7	FSM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	31	354	0	-354	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGACAGTTAAGAAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	110134271	110150037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
ENSMUSG00000054836.13_110134308_110150097_1	chr9	+	943	7	FSM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	67	294	36	-294	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGGGAGGATGGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	110134307	110150097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
ENSMUSG00000054836.13_110134308_110150137_1	chr9	+	983	7	FSM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	67	254	36	-254	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGGGCTCTGCTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	110134307	110150137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
ENSMUSG00000054836.13_110139160_110150277_1	chr9	+	1016	6	ISM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	4919	114	4888	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCATTAAGAGCCACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	110139159	110150277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
ENSMUSG00000054836.13_110143043_110150391_1	chr9	+	978	4	ISM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	8802	0	8771	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGGAGGTTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	110143042	110150391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_110143163_110144818_110145021_110148637_110148785_110149882
ENSMUSG00000054843.10_57599580_57643336_1	chr19	+	1341	7	FSM	ENSMUSG00000054843.10	ENST00000527407.5	1552	7	59	152	59	-152	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTGGAGGGACACTCGG	NA	NA	NA	NA	NA	NA	NA	NA	57599579	57643336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57643202
ENSMUSG00000054843.10_57599676_57643412_1	chr19	+	1321	7	FSM	ENSMUSG00000054843.10	ENST00000527407.5	1552	7	155	76	155	-76	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAATATATGGCTATAC	NA	NA	NA	NA	NA	NA	NA	NA	57599675	57643412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57643202
ENSMUSG00000054843.10_57599749_57643489_1	chr19	+	1325	7	FSM	ENSMUSG00000054843.10	ENST00000527407.5	1552	7	228	-1	228	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGGGAGCATCCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	57599748	57643489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57643202
ENSMUSG00000054855.14_98567507_98575339_1	chr15	-	1779	5	FSM	ENSMUSG00000054855.14	ENSMUST00000003451.11	2203	5	3	421	0	-421	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCACTCTGTAGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	98575339	98567506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98568724_98570391_98570527_98571726_98571837_98574367_98574456_98575110
ENSMUSG00000054863.10_87428500_87642158_1	chr15	+	1244	4	FSM	ENSMUSG00000054863.10	ENSMUST00000230414.2	2649	4	0	1405	0	-1405	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCTGCAGGACCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	87428499	87642158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_87428805_87565680_87565831_87604702_87604831_87641497
ENSMUSG00000054863.10_87428693_87642253_1	chr15	+	1146	4	FSM	ENSMUSG00000054863.10	ENSMUST00000230414.2	2649	4	193	1310	193	-1310	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTATCGTACTAAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	87428692	87642253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_87428805_87565680_87565831_87604702_87604831_87641497
ENSMUSG00000054863.10_87509431_87642592_1	chr15	+	1630	4	FSM	ENSMUSG00000054863.10	ENSMUST00000068088.8	2603	4	0	973	0	-971	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGGGTGGCCATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	87509430	87642592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_87509688_87565680_87565831_87604702_87604831_87641497
ENSMUSG00000054863.10_87509582_87642670_1	chr15	+	1557	4	FSM	ENSMUSG00000054863.10	ENSMUST00000068088.8	2603	4	151	895	151	-893	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTAGGAAGCTCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	87509581	87642670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_87509688_87565680_87565831_87604702_87604831_87641497
ENSMUSG00000054863.10_87565689_87642778_1	chr15	+	1551	3	ISM	ENSMUSG00000054863.10	ENSMUST00000068088.8	2603	4	56258	787	56258	-785	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTCCCTCTCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	87565688	87642778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_87565831_87604702_87604831_87641497
ENSMUSG00000054863.10_87565745_87642824_1	chr15	+	1541	3	ISM	ENSMUSG00000054863.10	ENSMUST00000068088.8	2603	4	56314	741	56314	-739	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCATGTACGGCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	87565744	87642824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_87565831_87604702_87604831_87641497
ENSMUSG00000054863.10_87565795_87642880_1	chr15	+	1547	3	ISM	ENSMUSG00000054863.10	ENSMUST00000068088.8	2603	4	56364	685	56364	-683	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCTTGTTCTCCACATT	NA	NA	NA	NA	NA	NA	NA	NA	87565794	87642880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_87565831_87604702_87604831_87641497
ENSMUSG00000054863.10_87604781_87643007_1	chr15	+	1560	2	ISM	ENSMUSG00000054863.10	ENSMUST00000068088.8	2603	4	95350	558	95350	-556	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCCATTCATTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	87604780	87643007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_87604831_87641497
ENSMUSG00000054894.7_69787673_69791432_1	chr12	+	1321	3	ISM	ENSMUSG00000054894.7	ENST00000557421.7	586	5	2949	4993	2949	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGGCTAGTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	69787672	69791432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_69787882_69788418_69788591_69790492
ENSMUSG00000054894.7_69788461_69791039_1	chr12	+	677	2	ISM	ENSMUSG00000054894.7	ENST00000557421.7	586	5	3737	5386	3737	-393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGGCTGTATGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	69788460	69791039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_69788591_69790492
ENSMUSG00000054942.14_151989426_152026311_1	chr3	-	850	9	ISM	ENSMUSG00000054942.14	ENSMUST00000199334.5	4024	14	19709	2212	1802	-2212	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAGGTAAAACTCACTA	NA	NA	NA	NA	NA	NA	NA	NA	152026311	151989425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246
ENSMUSG00000054942.14_151990916_152028045_1	chr3	-	854	9	ISM	ENSMUSG00000054942.14	ENSMUST00000199334.5	4024	14	17975	3702	68	-3702	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATTTAGAAAACCCACCG	NA	NA	NA	NA	NA	NA	NA	NA	152028045	151990915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986
ENSMUSG00000054976.15_81055487_81219565_1	chr1	+	1630	4	ISM	ENSMUSG00000054976.15	ENSMUST00000137862.8	3393	7	820	57084	36	-29814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCCAGGTCCAGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	81055486	81219565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_81055611_81064973_81065211_81169465_81169768_81218598
ENSMUSG00000054976.15_81055527_81219629_1	chr1	+	1654	4	ISM	ENSMUSG00000054976.15	ENSMUST00000137862.8	3393	7	860	57020	76	-29750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGCCTGCTGCGGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	81055526	81219629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_81055611_81064973_81065211_81169465_81169768_81218598
ENSMUSG00000054976.15_81055585_81219675_1	chr1	+	1642	4	ISM	ENSMUSG00000054976.15	ENSMUST00000137862.8	3393	7	918	56974	134	-29704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGAGAGTAAGTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	81055584	81219675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_81055611_81064973_81065211_81169465_81169768_81218598
ENSMUSG00000054976.15_81065010_81246815_1	chr1	+	1646	4	ISM	ENSMUSG00000054976.15	ENST00000272907.7	3511	6	9559	30377	9559	-2564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCAAAGAGAGAGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	81065009	81246815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_81065211_81169465_81169768_81218598_81219685_81246758
ENSMUSG00000054976.15_81065069_81246857_1	chr1	+	1629	4	ISM	ENSMUSG00000054976.15	ENST00000272907.7	3511	6	9618	30335	9618	-2522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCAGTGAAAGCTCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	81065068	81246857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_81065211_81169465_81169768_81218598_81219685_81246758
ENSMUSG00000054976.15_81065106_81246923_1	chr1	+	1658	4	ISM	ENSMUSG00000054976.15	ENST00000272907.7	3511	6	9655	30269	9655	-2456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTCTGTGAGCCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	81065105	81246923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_81065211_81169465_81169768_81218598_81219685_81246758
ENSMUSG00000054976.15_81169548_81275787_1	chr1	+	1627	4	ISM	ENSMUSG00000054976.15	ENST00000272907.7	3511	6	114097	1405	114097	-837	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCGTTAGCCAATCGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	81169547	81275787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_81169768_81218598_81219685_81246758_81246969_81275676
ENSMUSG00000054976.15_81169629_81275885_1	chr1	+	1644	4	ISM	ENSMUSG00000054976.15	ENST00000272907.7	3511	6	114178	1307	114178	-739	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTCTCTCTGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	81169628	81275885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_81169768_81218598_81219685_81246758_81246969_81275676
ENSMUSG00000054976.15_81169681_81275935_1	chr1	+	1642	4	ISM	ENSMUSG00000054976.15	ENST00000272907.7	3511	6	114230	1257	114230	-689	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATCTCCAAGAGAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	81169680	81275935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_81169768_81218598_81219685_81246758_81246969_81275676
ENSMUSG00000054976.15_81218641_81276041_1	chr1	+	1619	3	ISM	ENSMUSG00000054976.15	ENSMUST00000123720.8	3471	7	163720	583	163190	-583	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTAGTAAATGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	81218640	81276041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_81219685_81246758_81246969_81275676
ENSMUSG00000054976.15_81219261_81276671_1	chr1	+	1629	3	ISM	ENSMUSG00000054976.15	ENST00000272907.7	3511	6	163810	521	163810	22	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGGTGCATGGCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	81219260	81276671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_81219685_81246758_81246969_81275676
ENSMUSG00000054976.15_81246759_81277193_1	chr1	+	1727	2	ISM	ENSMUSG00000054976.15	ENST00000272907.7	3511	6	191308	-1	191308	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATCCTAACTACTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	81246758	81277193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_81246969_81275676
ENSMUSG00000054986.14_4014952_4025561_1	chr11	+	1118	11	FSM	ENSMUSG00000054986.14	ENST00000403066.5	1140	11	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCCACCCGAGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	4014951	4025561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_4015027_4016120_4016213_4016459_4016504_4016639_4016700_4017955_4018145_4019254_4019351_4020083_4020145_4021408_4021493_4024719_4024827_4025165_4025306_4025391
ENSMUSG00000054986.14_4014952_4025561_2	chr11	+	1117	11	NNC	ENSMUSG00000054986.14	novel	1140	11	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCCACCCGAGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	4014951	4025561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_4015027_4016121_4016213_4016459_4016504_4016639_4016700_4017955_4018145_4019254_4019351_4020083_4020145_4021408_4021493_4024719_4024827_4025165_4025306_4025391
ENSMUSG00000054986.14_4014952_4025561_3	chr11	+	1117	11	NNC	ENSMUSG00000054986.14	novel	1140	11	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCCACCCGAGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	4014951	4025561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_4015027_4016120_4016213_4016459_4016504_4016639_4016700_4017955_4018145_4019254_4019351_4020083_4020145_4021409_4021493_4024719_4024827_4025165_4025306_4025391
ENSMUSG00000054986.14_4014952_4026761_1	chr11	+	1600	12	FSM	ENSMUSG00000054986.14	ENSMUST00000068322.7	2686	12	111	975	22	14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGGACCAGAAGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	4014951	4026761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_4015006_4016136_4016213_4016459_4016504_4016639_4016700_4017955_4018145_4019254_4019351_4020083_4020145_4021408_4021496_4024719_4024827_4025165_4025306_4025391_4025562_4026245
ENSMUSG00000054986.14_4014952_4026761_2	chr11	+	1634	12	FSM	ENSMUSG00000054986.14	ENST00000401751.5	1642	12	22	-14	22	14	multi-exon	FALSE	canonical	NA	NA	NA	NA	2868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGGACCAGAAGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	4014951	4026761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_4015027_4016120_4016213_4016459_4016504_4016639_4016700_4017955_4018145_4019254_4019351_4020083_4020145_4021408_4021493_4024719_4024827_4025165_4025306_4025391_4025562_4026245
ENSMUSG00000054986.14_4014952_4026761_3	chr11	+	1590	12	NNC	ENSMUSG00000054986.14	novel	1605	12	NA	NA	22	14	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGGACCAGAAGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	4014951	4026761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_4015006_4016143_4016213_4016459_4016504_4016639_4016700_4017955_4018145_4019254_4019351_4020083_4020145_4021408_4021493_4024719_4024827_4025165_4025306_4025391_4025562_4026245
ENSMUSG00000054986.14_4016135_4026761_1	chr11	+	1538	11	NNC	ENSMUSG00000054986.14	novel	1642	12	NA	NA	1205	14	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGGACCAGAAGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	4016134	4026761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_4016213_4016459_4016504_4016639_4016700_4017955_4018145_4019254_4019351_4020083_4020138_4021408_4021493_4024719_4024827_4025165_4025306_4025391_4025562_4026245
ENSMUSG00000054986.14_4016135_4026761_3	chr11	+	1537	11	NNC	ENSMUSG00000054986.14	novel	1642	12	NA	NA	1205	14	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGGACCAGAAGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	4016134	4026761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_4016213_4016459_4016504_4016639_4016700_4017955_4018145_4019262_4019351_4020083_4020145_4021408_4021493_4024719_4024827_4025165_4025306_4025391_4025562_4026245
ENSMUSG00000054999.3_6155960_6156928_1	chr19	+	439	4	ISM	ENSMUSG00000054999.3	ENST00000340252.8	2334	17	99	8657	99	-8657	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCATCGCTCTGACTCGC	NA	NA	NA	NA	NA	NA	NA	NA	6155959	6156928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6156028_6156115_6156289_6156374_6156497_6156852
ENSMUSG00000054999.3_6156145_6158537_1	chr19	+	439	4	ISM	ENSMUSG00000054999.3	ENST00000340252.8	2334	17	284	7048	284	-7048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTGATATCAATGACG	NA	NA	NA	NA	NA	NA	NA	NA	6156144	6158537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6156289_6156374_6156497_6156852_6156976_6158487
ENSMUSG00000054999.3_6156196_6158593_1	chr19	+	444	4	ISM	ENSMUSG00000054999.3	ENST00000340252.8	2334	17	335	6992	335	-6992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGGCTGCCTCCTTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	6156195	6158593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6156289_6156374_6156497_6156852_6156976_6158487
ENSMUSG00000054999.3_6156241_6158649_1	chr19	+	455	4	ISM	ENSMUSG00000054999.3	ENST00000340252.8	2334	17	380	6936	380	-6936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGACCCCCTACCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	6156240	6158649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6156289_6156374_6156497_6156852_6156976_6158487
ENSMUSG00000054999.3_6156451_6158756_1	chr19	+	438	3	ISM	ENSMUSG00000054999.3	ENST00000340252.8	2334	17	590	6829	590	-6829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATCTGCTCTGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	6156450	6158756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6156497_6156852_6156976_6158487
ENSMUSG00000054999.3_6156926_6159692_1	chr19	+	449	4	ISM	ENSMUSG00000054999.3	ENST00000356632.7	2100	17	1065	5893	1065	-5893	internal_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCTGGGTACATGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	6156925	6159692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6156976_6158487_6158772_6159448_6159535_6159663
ENSMUSG00000054999.3_6158549_6162198_1	chr19	+	445	4	ISM	ENSMUSG00000054999.3	ENST00000356632.7	2100	17	2688	3387	2688	-3387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTCCATCATATTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	6158548	6162198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6158772_6159448_6159535_6159663_6159784_6162182
ENSMUSG00000054999.3_6158693_6162394_1	chr19	+	407	5	ISM	ENSMUSG00000054999.3	ENST00000356632.7	2100	17	2832	3191	2832	-3191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCAATGTGGACATCTC	NA	NA	NA	NA	NA	NA	NA	NA	6158692	6162394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6158772_6159448_6159535_6159663_6159784_6162182_6162269_6162358
ENSMUSG00000054999.3_6158713_6162537_1	chr19	+	448	6	ISM	ENSMUSG00000054999.3	ENST00000356632.7	2100	17	2852	3048	2852	-3048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTACAAAGTGTGATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	6158712	6162537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6158772_6159448_6159535_6159663_6159784_6162182_6162269_6162358_6162423_6162504
ENSMUSG00000054999.3_6162182_6164553_1	chr19	+	484	6	ISM	ENSMUSG00000054999.3	ENST00000340252.8	2334	17	6321	1032	2	-1032	internal_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAGGGGACAGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	6162181	6164553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6162269_6162358_6162423_6162504_6162573_6162724_6162817_6162905_6162997_6164471
ENSMUSG00000054999.3_6162904_6164971_1	chr19	+	437	4	ISM	ENSMUSG00000054999.3	ENST00000340252.8	2334	17	7043	614	724	-614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGTCAGCAGAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	6162903	6164971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6162997_6164471_6164554_6164633_6164808_6164883
ENSMUSG00000054999.3_6164518_6165452_1	chr19	+	445	5	ISM	ENSMUSG00000054999.3	ENST00000526799.5	878	8	2338	142	2338	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGCTTATGCCAAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	6164517	6165452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6164554_6164633_6164808_6164883_6164972_6165075_6165169_6165398
ENSMUSG00000054999.3_6164727_6165549_1	chr19	+	413	4	ISM	ENSMUSG00000054999.3	ENST00000526799.5	878	8	2547	45	2547	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCAGCCACCCTGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	6164726	6165549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6164808_6164883_6164972_6165075_6165169_6165398
ENSMUSG00000055013.17_89508825_89561968_1	chr1	+	1013	6	ISM	ENSMUSG00000055013.17	ENST00000409538.5	5571	18	867	256985	867	-69332	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGCGCCACCTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	89508824	89561968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89509376_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881
ENSMUSG00000055013.17_89509033_89591469_1	chr1	+	940	7	ISM	ENSMUSG00000055013.17	ENST00000409538.5	5571	18	1075	227484	1075	-39831	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTCTGCCCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	89509032	89591469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89509376_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382
ENSMUSG00000055013.17_89509147_89592814_1	chr1	+	926	8	ISM	ENSMUSG00000055013.17	ENST00000409538.5	5571	18	1189	226139	1189	-38486	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGCCAGAAAGAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	89509146	89592814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89509376_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755
ENSMUSG00000055013.17_89532318_89631300_1	chr1	+	1058	9	FSM	ENSMUSG00000055013.17	ENST00000619456.4	1058	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTGGGAGTTAACACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	89532317	89631300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89631131
ENSMUSG00000055013.17_89558107_89717046_1	chr1	+	1252	9	ISM	ENSMUSG00000055013.17	ENST00000428334.6	4332	18	25788	101926	25788	85746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGGCCTGGGCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	89558106	89717046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884
ENSMUSG00000055013.17_89558194_89716960_1	chr1	+	920	8	ISM	ENSMUSG00000055013.17	ENST00000409538.5	5571	18	50236	101993	25875	85660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCCCCACGCCAACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	89558193	89716960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884
ENSMUSG00000055013.17_89592802_89770849_1	chr1	+	1151	9	ISM	ENSMUSG00000055013.17	ENST00000428334.6	4332	18	60483	48123	60483	-45756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGACTGGCCCATGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	89592801	89770849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742
ENSMUSG00000055013.17_89592822_89817066_1	chr1	+	2157	11	ISM	ENSMUSG00000055013.17	ENST00000428334.6	4332	18	60503	1906	60503	461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTGAAGCCCCTATGAT	NA	NA	NA	NA	NA	NA	NA	NA	89592821	89817066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ENSMUSG00000055013.17_89592823_89770803_1	chr1	+	925	8	ISM	ENSMUSG00000055013.17	ENST00000409538.5	5571	18	84865	48150	60504	-45802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGAATCTCGGCACCCACC	NA	NA	NA	NA	NA	NA	NA	NA	89592822	89770803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89762155_89762311_89765433_89765525_89770742
ENSMUSG00000055013.17_89598901_89770965_1	chr1	+	998	7	ISM	ENSMUSG00000055013.17	ENST00000409538.5	5571	18	90943	47988	66582	-45640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAACTCACAGATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	89598900	89770965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89762155_89762311_89765433_89765525_89770742
ENSMUSG00000055013.17_89671530_89815434_1	chr1	+	927	6	ISM	ENSMUSG00000055013.17	ENST00000409538.5	5571	18	163572	3519	-45352	-1171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCCTGTCGCAAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	89671529	89815434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89671619_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227
ENSMUSG00000055013.17_89716885_89770901_1	chr1	+	567	4	ISM	ENSMUSG00000055013.17	ENST00000444431.1	1302	7	3	46785	3	-45704	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAACAGCGTGTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	89716884	89770901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89717047_89762155_89762311_89765433_89765525_89770742
ENSMUSG00000055013.17_89762191_89815305_1	chr1	+	512	4	ISM	ENSMUSG00000055013.17	ENST00000444431.1	1302	7	45309	2381	45309	-1300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGCCAGCAGCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	89762190	89815305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89762311_89765433_89765525_89770742_89770966_89815227
ENSMUSG00000055013.17_89765452_89816808_1	chr1	+	948	4	ISM	ENSMUSG00000055013.17	ENST00000444431.1	1302	7	48570	878	48570	203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTTCCCCACCCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	89765451	89816808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89765525_89770742_89770966_89815227_89815484_89816412
ENSMUSG00000055013.17_89770827_89817416_1	chr1	+	537	4	ISM	ENSMUSG00000055013.17	ENST00000444431.1	1302	7	53945	270	53945	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCCCCTTACTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	89770826	89817416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89770966_89815227_89815484_89816412_89816536_89817397
ENSMUSG00000055013.17_89770900_89817454_1	chr1	+	502	4	ISM	ENSMUSG00000055013.17	ENST00000444431.1	1302	7	54018	232	54018	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATAAGTAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	89770899	89817454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89770966_89815227_89815484_89816412_89816536_89817397
ENSMUSG00000055013.17_89815308_89817211_1	chr1	+	975	2	ISM	ENSMUSG00000055013.17	ENST00000444431.1	1302	7	98426	475	98426	-475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCATATTAGCCGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	89815307	89817211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89815484_89816412
ENSMUSG00000055013.17_89815317_89817617_1	chr1	+	510	3	ISM	ENSMUSG00000055013.17	ENST00000444431.1	1302	7	98435	69	98435	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCACAAGGTCTGGATTAC	NA	NA	NA	NA	NA	NA	NA	NA	89815316	89817617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89815484_89816412_89816536_89817397
ENSMUSG00000055013.17_89815373_89817723_1	chr1	+	560	3	ISM	ENSMUSG00000055013.17	ENST00000444431.1	1302	7	98491	-37	98491	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACCCATGTTAATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	89815372	89817723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89815484_89816412_89816536_89817397
ENSMUSG00000055013.17_89817586_89818953_1	chr1	+	932	2	ISM	ENSMUSG00000055013.17	ENST00000428334.6	4332	18	285267	19	100704	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGATTCCTTGTTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	89817585	89818953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_89817902_89818337
ENSMUSG00000055013.17_89817588_89818953_1	chr1	+	925	2	NNC	ENSMUSG00000055013.17	novel	5571	18	NA	NA	100706	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGATTCCTTGTTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	89817587	89818953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_89817903_89818343
ENSMUSG00000055022.15_92059238_92148779_1	chr15	+	1401	10	ISM	ENSMUSG00000055022.15	ENST00000547849.5	2865	16	-59	35395	0	-35395	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATAGGCAGTGACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	92059237	92148779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_92059543_92114196_92114329_92118327_92118361_92126503_92126637_92129981_92130155_92132305_92132402_92140771_92140979_92143608_92143709_92143841_92144024_92148739
ENSMUSG00000055022.15_92059467_92150357_1	chr15	+	1337	11	ISM	ENSMUSG00000055022.15	ENST00000547849.5	2865	16	170	33817	170	-33817	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCCATTTATGCCAACG	NA	NA	NA	NA	NA	NA	NA	NA	92059466	92150357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_92059543_92114196_92114329_92118327_92118361_92126503_92126637_92129981_92130155_92132305_92132402_92140771_92140979_92143608_92143709_92143841_92144024_92148739_92148865_92150277
ENSMUSG00000055022.15_92114196_92151809_1	chr15	+	1319	11	ISM	ENSMUSG00000055022.15	ENST00000547849.5	2865	16	54899	32365	54899	-32365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAATCCTATGAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92114195	92151809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_92114329_92118327_92118361_92126503_92126637_92129981_92130155_92132305_92132402_92140771_92140979_92143608_92143709_92143841_92144024_92148739_92148865_92150277_92150396_92151790
ENSMUSG00000055022.15_92114240_92151868_1	chr15	+	1334	11	ISM	ENSMUSG00000055022.15	ENST00000547849.5	2865	16	54943	32306	54943	-32306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACCCAAGGCCGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	92114239	92151868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_92114329_92118327_92118361_92126503_92126637_92129981_92130155_92132305_92132402_92140771_92140979_92143608_92143709_92143841_92144024_92148739_92148865_92150277_92150396_92151790
ENSMUSG00000055022.15_92126541_92153794_1	chr15	+	1315	10	ISM	ENSMUSG00000055022.15	ENST00000547849.5	2865	16	67244	30380	67244	-30380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGCTTTGCAGAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	92126540	92153794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_92126637_92129981_92130155_92132305_92132402_92140771_92140979_92143608_92143709_92143841_92144024_92148739_92148865_92150277_92150396_92151790_92151942_92153727
ENSMUSG00000055022.15_92129988_92159405_1	chr15	+	1326	10	ISM	ENSMUSG00000055022.15	ENST00000547849.5	2865	16	70691	24769	70691	-24769	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACCATGCAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	92129987	92159405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_92130155_92132305_92132402_92140771_92140979_92143608_92143709_92143841_92144024_92148739_92148865_92150277_92150396_92151790_92151942_92153727_92153856_92159353
ENSMUSG00000055022.15_92130049_92159471_1	chr15	+	1331	10	ISM	ENSMUSG00000055022.15	ENST00000547849.5	2865	16	70752	24703	70752	-24703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGCTACGTGATTGACT	NA	NA	NA	NA	NA	NA	NA	NA	92130048	92159471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_92130155_92132305_92132402_92140771_92140979_92143608_92143709_92143841_92144024_92148739_92148865_92150277_92150396_92151790_92151942_92153727_92153856_92159353
ENSMUSG00000055022.15_92130110_92159522_1	chr15	+	1321	10	ISM	ENSMUSG00000055022.15	ENST00000547849.5	2865	16	70813	24652	70813	-24652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAATTTTATGGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	92130109	92159522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_92130155_92132305_92132402_92140771_92140979_92143608_92143709_92143841_92144024_92148739_92148865_92150277_92150396_92151790_92151942_92153727_92153856_92159353
ENSMUSG00000055022.15_92132306_92169235_1	chr15	+	1410	10	ISM	ENSMUSG00000055022.15	ENST00000547849.5	2865	16	73009	14939	73009	-14939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGTTGCCAACGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	92132305	92169235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_92132402_92140771_92140979_92143608_92143709_92143841_92144024_92148739_92148865_92150277_92150396_92151790_92151942_92153727_92153856_92159353_92159536_92169114
ENSMUSG00000055022.15_92140814_92183511_1	chr15	+	1347	10	ISM	ENSMUSG00000055022.15	ENST00000547849.5	2865	16	81517	663	81517	-663	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATCGGGACCCTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	92140813	92183511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_92140979_92143608_92143709_92143841_92144024_92148739_92148865_92150277_92150396_92151790_92151942_92153727_92153856_92159353_92159536_92169114_92169236_92183436
ENSMUSG00000055022.15_92140896_92183552_1	chr15	+	1306	10	ISM	ENSMUSG00000055022.15	ENST00000547849.5	2865	16	81599	622	81599	-622	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAAACTGGGATGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	92140895	92183552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_92140979_92143608_92143709_92143841_92144024_92148739_92148865_92150277_92150396_92151790_92151942_92153727_92153856_92159353_92159536_92169114_92169236_92183436
ENSMUSG00000055022.15_92148761_92183945_1	chr15	+	1313	7	ISM	ENSMUSG00000055022.15	ENST00000547849.5	2865	16	89464	229	89464	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACACTGGCACACACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	92148760	92183945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_92148865_92150277_92150396_92151790_92151942_92153727_92153856_92159353_92159536_92169114_92169236_92183436
ENSMUSG00000055022.15_92148802_92184006_1	chr15	+	1333	7	ISM	ENSMUSG00000055022.15	ENST00000547849.5	2865	16	89505	168	89505	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGTTGCAATCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	92148801	92184006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_92148865_92150277_92150396_92151790_92151942_92153727_92153856_92159353_92159536_92169114_92169236_92183436
ENSMUSG00000055022.15_92150294_92184116_1	chr15	+	1364	6	ISM	ENSMUSG00000055022.15	ENST00000547849.5	2865	16	90997	58	90997	-58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTTCAACAGTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	92150293	92184116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_92150396_92151790_92151942_92153727_92153856_92159353_92159536_92169114_92169236_92183436
ENSMUSG00000055024.13_81485655_81492515_1	chr15	+	210	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	14825	43758	14825	-43758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATCTCCATTTGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	81485654	81492515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81485747_81492397
ENSMUSG00000055024.13_81494708_81497390_1	chr15	+	244	3	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	23878	38883	23878	-38883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGCTTGGAAACCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	81494707	81497390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81494818_81495610_81495725_81497370
ENSMUSG00000055024.13_81494772_81497439_1	chr15	+	229	3	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	23942	38834	23942	-38834	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCCTAAGCACTGTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	81494771	81497439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81494818_81495610_81495725_81497370
ENSMUSG00000055024.13_81495701_81497590_1	chr15	+	244	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	24871	38683	24871	-38683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCATGCGGTCTGTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	81495700	81497590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81495725_81497370
ENSMUSG00000055024.13_81510586_81511441_1	chr15	+	229	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	39756	24832	39756	-24832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTCATCATACCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	81510585	81511441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81510677_81511303
ENSMUSG00000055024.13_81514247_81515973_1	chr15	+	233	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	43417	20300	43417	-20300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTCTAAACTTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	81514246	81515973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81514321_81515814
ENSMUSG00000055024.13_81514307_81516041_1	chr15	+	241	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	43477	20232	43477	-20232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTGGCAGAAAGGTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	81514306	81516041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81514321_81515814
ENSMUSG00000055024.13_81515953_81518251_1	chr15	+	238	3	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	45123	18022	45123	-18022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGGGTGATGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	81515952	81518251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81516055_81516624_81516714_81518204
ENSMUSG00000055024.13_81520986_81524044_1	chr15	+	230	3	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	50156	12229	50156	-12229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGCTTCTGACAAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	81520985	81524044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81521045_81523180_81523249_81523941
ENSMUSG00000055024.13_81524291_81525524_1	chr15	+	230	3	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	53461	10749	53461	-10749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCACCTGATCAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	81524290	81525524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81524343_81524640_81524755_81525460
ENSMUSG00000055024.13_81525460_81527282_1	chr15	+	222	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	54630	8991	54630	-8991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGAAGGTGATTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	81525459	81527282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81525627_81527227
ENSMUSG00000055024.13_81525561_81527393_1	chr15	+	232	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	54731	8880	54731	-8880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGGCTTTCTGTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	81525560	81527393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81525627_81527227
ENSMUSG00000055024.13_81527222_81529118_1	chr15	+	214	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	56392	7155	56392	-7155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAACCAGCAAAAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	81527221	81529118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81527393_81529075
ENSMUSG00000055024.13_81532719_81533130_1	chr15	+	231	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	61889	3143	61889	-3143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCGCCTGAGCATCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	81532718	81533130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81532822_81533002
ENSMUSG00000055024.13_81532776_81533185_1	chr15	+	229	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	61946	3088	61946	-3088	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAACGCCAACTGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	81532775	81533185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_81532822_81533002
ENSMUSG00000055044.13_40211134_40218983_1	chr19	-	233	3	ISM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	41077	1517	41077	-1517	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCCATTTCTTTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	40218983	40211133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40211216_40211494_40211613_40218950
ENSMUSG00000055044.13_40211583_40231893_1	chr19	-	226	3	ISM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	28167	1966	28167	-1966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTAAAGCTCCAGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	40231893	40211582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40211613_40218950_40219103_40231849
ENSMUSG00000055044.13_40219036_40231991_1	chr19	-	209	2	ISM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	28069	9419	28069	-9419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGGAGAAGCAAGAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	40231991	40219035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40219103_40231849
ENSMUSG00000055044.13_40231901_40240370_1	chr19	-	245	3	ISM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	19690	22284	19690	-22284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGAGTCGAAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	40240370	40231900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40232044_40238062_40238148_40240353
ENSMUSG00000055044.13_40231975_40240415_1	chr19	-	216	3	ISM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	19645	22358	19645	-22358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGGTCATCACAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	40240415	40231974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40232044_40238062_40238148_40240353
ENSMUSG00000055044.13_40232026_40240487_1	chr19	-	237	3	ISM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	19573	22409	19573	-22409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCCCACAACCGAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	40240487	40232025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40232044_40238062_40238148_40240353
ENSMUSG00000055044.13_40238122_40259834_1	chr19	-	223	3	ISM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	226	28505	226	-28505	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGACCGAGGAGGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	40259834	40238121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40238148_40240353_40240506_40259789
ENSMUSG00000055044.13_40240420_40259928_1	chr19	-	225	2	ISM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	132	30803	132	-30803	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACACTTGGAAGCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	40259928	40240419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40240506_40259789
ENSMUSG00000055053.19_81236057_81244016_1	chr10	-	1362	5	ISM	ENSMUSG00000055053.19	ENSMUST00000105321.10	6237	9	19005	4037	18932	730	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCCACCTCGTCCATCGG	NA	NA	NA	NA	NA	NA	NA	NA	81244016	81236056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81236906_81240657_81240843_81241922_81242049_81243388_81243514_81243939
ENSMUSG00000055053.19_81236176_81244224_1	chr10	-	1346	6	ISM	ENSMUSG00000055053.19	ENSMUST00000105321.10	6237	9	18797	4156	18724	611	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATGGAAGGTATCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	81244224	81236175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81236906_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168
ENSMUSG00000055053.19_81236380_81256184_1	chr10	-	1317	8	ISM	ENSMUSG00000055053.19	ENSMUST00000105321.10	6237	9	6837	4360	6764	407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGCTGGCCCTGCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	81256184	81236379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81236906_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100
ENSMUSG00000055053.19_81236603_81256407_1	chr10	-	1317	8	ISM	ENSMUSG00000055053.19	ENSMUST00000105321.10	6237	9	6614	4583	6541	184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGGCAATCCTGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	81256407	81236602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81236906_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100
ENSMUSG00000055053.19_81236787_81256557_1	chr10	-	1283	8	ISM	ENSMUSG00000055053.19	ENSMUST00000105321.10	6237	9	6464	4767	6391	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGGACTCCCAGCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	81256557	81236786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_81236906_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100
ENSMUSG00000055067.16_178783994_178920504_1	chr1	-	1691	6	ISM	ENSMUSG00000055067.16	ENSMUST00000128302.8	6871	12	425095	4469	425066	-4469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCCCTTTGACATACAC	NA	NA	NA	NA	NA	NA	NA	NA	178920504	178783993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_178785128_178799752_178799862_178871301_178871477_178877855_178877944_178913888_178914000_178920430
ENSMUSG00000055078.8_57057420_57071634_1	chr7	-	1747	4	ISM	ENSMUSG00000055078.8	ENSMUST00000206382.2	2607	11	87485	-47	87485	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGATCTCATGCCATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	57071634	57057419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_57058658_57063333_57063546_57067967_57068121_57071490
ENSMUSG00000055078.8_57057653_57159514_1	chr7	-	2255	11	FSM	ENSMUSG00000055078.8	ENST00000400081.7	2719	11	223	241	223	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAACCAATCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	57159514	57057652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_57058658_57063333_57063546_57067967_57068121_57071490_57071635_57102692_57102776_57138549_57138771_57138874_57138943_57140487_57140610_57157726_57157887_57158245_57158306_57159487
ENSMUSG00000055078.8_57057822_57159570_1	chr7	-	2142	11	FSM	ENSMUSG00000055078.8	ENST00000400081.7	2719	11	167	410	167	-169	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTATGCAGACAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	57159570	57057821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_57058658_57063333_57063546_57067967_57068121_57071490_57071635_57102692_57102776_57138549_57138771_57138874_57138943_57140487_57140610_57157726_57157887_57158245_57158306_57159487
ENSMUSG00000055078.8_57057838_57138942_1	chr7	-	1701	7	ISM	ENSMUSG00000055078.8	ENSMUST00000206382.2	2607	11	20177	371	20177	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATAGAATAAGCAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	57138942	57057837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_57058658_57063333_57063546_57067967_57068121_57071490_57071635_57102692_57102776_57138549_57138771_57138874
ENSMUSG00000055078.8_57057925_57159757_1	chr7	-	2226	11	FSM	ENSMUSG00000055078.8	ENST00000400081.7	2719	11	-20	513	0	-272	multi-exon	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGGACATTTAAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	57159757	57057924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_57058658_57063333_57063546_57067967_57068121_57071490_57071635_57102692_57102776_57138549_57138771_57138874_57138943_57140487_57140610_57157726_57157887_57158245_57158306_57159487
ENSMUSG00000055078.8_57057941_57140580_1	chr7	-	1691	8	ISM	ENSMUSG00000055078.8	ENSMUST00000206382.2	2607	11	18539	474	18539	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTAATGAAGAGCAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	57140580	57057940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_57058658_57063333_57063546_57067967_57068121_57071490_57071635_57102692_57102776_57138549_57138771_57138874_57138943_57140487
ENSMUSG00000055078.8_57058225_57159807_1	chr7	-	1712	11	FSM	ENSMUSG00000055078.8	ENST00000335625.10	2519	11	-6	813	0	-572	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACGTGTAACTTCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	57159807	57058224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_57058658_57063333_57063546_57067967_57068121_57071490_57071635_57102692_57102776_57138549_57138771_57138874_57138943_57140487_57140610_57157726_57157887_57158245_57158306_57159751
ENSMUSG00000055116.9_112878722_112912813_1	chr7	+	1949	17	ISM	ENSMUSG00000055116.9	ENSMUST00000210238.2	2976	21	71958	520	44892	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCGCTGTAGACACTAC	NA	NA	NA	NA	NA	NA	NA	NA	112878721	112912813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
ENSMUSG00000055116.9_112879891_112913047_1	chr7	+	2081	16	ISM	ENSMUSG00000055116.9	ENSMUST00000210238.2	2976	21	73127	286	46061	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGATAGCTTGCATTAA	NA	NA	NA	NA	NA	NA	NA	NA	112879890	112913047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
ENSMUSG00000055116.9_112884204_112913203_1	chr7	+	2039	13	ISM	ENSMUSG00000055116.9	ENSMUST00000211770.2	2464	20	50374	-156	50374	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTATACTAATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	112884203	112913203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
ENSMUSG00000055116.9_112886341_112913333_1	chr7	+	1992	12	ISM	ENSMUSG00000055116.9	ENSMUST00000211770.2	2464	20	52511	-286	52511	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGTTCCCAATTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	112886340	112913333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
ENSMUSG00000055128.16_47069582_47091650_1	chr14	+	1318	6	NNC	ENSMUSG00000055128.16	novel	1324	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGACACTGTCTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	47069581	47091650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_47069837_47077613_47077754_47083330_47083503_47083641_47083790_47090835_47090944_47091155
ENSMUSG00000055137.8_17497803_17846361_1	chr13	-	581	7	ISM	ENSMUSG00000055137.8	ENST00000401647.7	728	9	22959	0	22959	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTATGCAAGGTAATCC	NA	NA	NA	NA	NA	NA	NA	NA	17846361	17497802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_17497862_17627041_17627138_17752074_17752167_17819365_17819487_17836803_17836855_17837323_17837410_17846285
ENSMUSG00000055148.8_73073989_73075500_1	chr8	+	1011	2	ISM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	1112	0	1112	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTTGGGGTTTAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	73073988	73075500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_73074087_73074587
ENSMUSG00000055172.11_124489364_124490787_1	chr6	+	573	2	ISM	ENSMUSG00000055172.11	ENSMUST00000068593.9	2981	11	0	9615	0	-9615	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTGACGTGGAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	124489363	124490787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124489760_124490610
ENSMUSG00000055172.11_124489582_124492750_1	chr6	+	529	3	ISM	ENSMUSG00000055172.11	ENSMUST00000068593.9	2981	11	218	7652	218	-7652	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTCCAATGAGGAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	124489581	124492750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124489760_124490610_124490837_124492625
ENSMUSG00000055172.11_124496760_124499524_1	chr6	+	515	3	ISM	ENSMUSG00000055172.11	ENSMUST00000068593.9	2981	11	7396	878	7396	-878	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGCCCCGAACTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	124496759	124499524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_124496836_124498578_124498654_124499160
ENSMUSG00000055184.5_131455641_131467254_1	chr1	+	1835	4	FSM	ENSMUSG00000055184.5	ENSMUST00000068613.5	2191	4	0	356	0	-356	multi-exon	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGGGATTTTTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	131455640	131467254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_131456591_131458391_131458470_131461546_131461672_131466572
ENSMUSG00000055184.5_131456082_131467624_1	chr1	+	1764	4	FSM	ENSMUSG00000055184.5	ENSMUST00000068613.5	2191	4	441	-14	-53	14	multi-exon	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTCATGTAGAAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	131456081	131467624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_131456591_131458391_131458470_131461546_131461672_131466572
ENSMUSG00000055184.5_131456327_131466748_1	chr1	+	517	3	NNC	ENSMUSG00000055184.5	novel	707	3	NA	NA	192	3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	603	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGCCGGTGGTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	131456326	131466748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_131456591_131458392_131458470_131466572
ENSMUSG00000055184.5_131456327_131466748_2	chr1	+	518	3	FSM	ENSMUSG00000055184.5	ENST00000619376.4	707	3	192	-3	192	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGCCGGTGGTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	131456326	131466748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_131456591_131458391_131458470_131466572
ENSMUSG00000055184.5_131456473_131466748_1	chr1	+	372	3	FSM	ENSMUSG00000055184.5	ENST00000619376.4	707	3	338	-3	338	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGCCGGTGGTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	131456472	131466748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_131456591_131458391_131458470_131466572
ENSMUSG00000055184.5_131456473_131466748_2	chr1	+	371	3	NNC	ENSMUSG00000055184.5	novel	707	3	NA	NA	338	3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGCCGGTGGTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	131456472	131466748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_131456591_131458392_131458470_131466572
ENSMUSG00000055200.8_27173193_27176438_1	chr7	+	978	2	FSM	ENSMUSG00000055200.8	ENSMUST00000068641.8	1329	2	0	351	0	-351	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCACTGTCCTTATGACC	NA	NA	NA	NA	NA	NA	NA	NA	27173192	27176438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_27173297_27175564
ENSMUSG00000055235.12_24917636_24935399_1	chr5	-	994	5	NNC	ENSMUSG00000055235.12	novel	1066	5	NA	NA	1	-63	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCACGCCTCTTTAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	24935399	24917635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_24917738_24917843_24917952_24922964_24923386_24927632_24927775_24935178
ENSMUSG00000055235.12_24917636_24935399_2	chr5	-	1002	5	FSM	ENSMUSG00000055235.12	ENST00000628331.1	1066	5	1	63	1	-63	multi-exon	FALSE	canonical	NA	NA	NA	NA	2149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCACGCCTCTTTAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	24935399	24917635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_24917750_24917847_24917952_24922964_24923386_24927632_24927775_24935178
ENSMUSG00000055235.12_24917636_24935399_3	chr5	-	993	5	NNC	ENSMUSG00000055235.12	novel	1066	5	NA	NA	1	-63	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCACGCCTCTTTAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	24935399	24917635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_24917750_24917847_24917943_24922964_24923386_24927632_24927775_24935178
ENSMUSG00000055235.12_24917636_24935399_4	chr5	-	994	5	NNC	ENSMUSG00000055235.12	novel	1066	5	NA	NA	1	-63	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCACGCCTCTTTAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	24935399	24917635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_24917750_24917847_24917952_24922964_24923386_24927632_24927767_24935178
ENSMUSG00000055235.12_24917636_24935399_5	chr5	-	994	5	NNC	ENSMUSG00000055235.12	novel	1066	5	NA	NA	1	-63	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCACGCCTCTTTAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	24935399	24917635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_24917750_24917847_24917952_24922964_24923378_24927632_24927775_24935178
ENSMUSG00000055239.11_72819552_72825491_1	chr6	-	846	2	ISM	ENSMUSG00000055239.11	ENSMUST00000204598.3	1743	7	50784	0	50784	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCTGTGTGTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	72825491	72819551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72820114_72825207
ENSMUSG00000055239.11_72819664_72826485_1	chr6	-	792	3	ISM	ENSMUSG00000055239.11	ENSMUST00000204598.3	1743	7	49790	112	49790	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAATGTAGGTAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	72826485	72819663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72820114_72825207_72825491_72826426
ENSMUSG00000055239.11_72819713_72826552_1	chr6	-	810	3	ISM	ENSMUSG00000055239.11	ENSMUST00000204598.3	1743	7	49723	161	49723	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATATATGATAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	72826552	72819712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72820114_72825207_72825491_72826426
ENSMUSG00000055239.11_72825219_72838860_1	chr6	-	809	5	ISM	ENSMUSG00000055239.11	ENSMUST00000204598.3	1743	7	37415	5667	37415	-5251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTAACAAGGTATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	72838860	72825218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740
ENSMUSG00000055239.11_72825448_72876754_1	chr6	-	786	6	ISM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	208	7351	-68	-5480	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTAACTCTTCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	72876754	72825447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
ENSMUSG00000055296.15_56879984_56888594_1	chr4	-	564	3	ISM	ENSMUSG00000055296.15	ENST00000374586.8	2946	18	58829	49	58817	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTCTTTGATTATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	56888594	56879983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_56880293_56886017_56886213_56888534
ENSMUSG00000055296.15_56880247_56899072_1	chr4	-	564	5	ISM	ENSMUSG00000055296.15	ENSMUST00000107609.4	2643	18	48339	0	48339	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTCCCTGCAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	56899072	56880246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025
ENSMUSG00000055296.15_56890800_56906313_1	chr4	-	601	5	ISM	ENSMUSG00000055296.15	ENST00000374586.8	2946	18	41110	10865	41098	-10553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAACAACCATATACAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	56906313	56890799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214
ENSMUSG00000055296.15_56899119_56912106_1	chr4	-	557	6	ISM	ENSMUSG00000055296.15	ENST00000374586.8	2946	18	35317	19184	35305	-18872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCAGTGAAGTGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	56912106	56899118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047
ENSMUSG00000055296.15_56899347_56916774_1	chr4	-	560	6	ISM	ENSMUSG00000055296.15	ENST00000374586.8	2946	18	30649	19412	30637	-19100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAGTGGCACTGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	56916774	56899346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701
ENSMUSG00000055296.15_56910190_56925102_1	chr4	-	564	6	ISM	ENSMUSG00000055296.15	ENST00000374586.8	2946	18	22321	30255	22309	-29943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGTATGGACGGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	56925102	56910189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_56910248_56912047_56912131_56916701_56916807_56922386_56922411_56923338_56923509_56924978
ENSMUSG00000055296.15_56923423_56937915_1	chr4	-	587	5	ISM	ENSMUSG00000055296.15	ENST00000374586.8	2946	18	9508	43488	9496	-43176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCCTGAAGGAGCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	56937915	56923422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_56923509_56924978_56925207_56926176_56926294_56936368_56936471_56937861
ENSMUSG00000055296.15_56924999_56946874_1	chr4	-	575	5	ISM	ENSMUSG00000055296.15	ENST00000374586.8	2946	18	549	45064	537	-44752	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCAGTGCCTGTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	56946874	56924998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_56925207_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ENSMUSG00000055296.15_56925064_56946922_1	chr4	-	558	5	ISM	ENSMUSG00000055296.15	ENST00000374586.8	2946	18	501	45129	489	-44817	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTGTCTCTTGTGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	56946922	56925063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_56925207_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ENSMUSG00000055296.15_56925117_56946986_1	chr4	-	569	5	ISM	ENSMUSG00000055296.15	ENST00000374586.8	2946	18	437	45182	425	-44870	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCCCGAGATGGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	56946986	56925116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_56925207_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ENSMUSG00000055296.15_56936409_56947226_1	chr4	-	562	3	ISM	ENSMUSG00000055296.15	ENSMUST00000107609.4	2643	18	185	56162	185	-56162	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCACCCTTTATGAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	56947226	56936408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_56936471_56937861_56937980_56946844
ENSMUSG00000055302.6_36953005_36953761_1	chr5	-	499	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	355	794	355	-794	multi-exon	FALSE	canonical	NA	NA	NA	NA	1241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAGGGCCTAGATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	36953761	36953004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_36953289_36953546
ENSMUSG00000055302.6_36953130_36953882_1	chr5	-	495	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	234	919	234	-919	multi-exon	FALSE	canonical	NA	NA	NA	NA	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTACGTTTCTGCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	36953882	36953129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_36953289_36953546
ENSMUSG00000055302.6_36953197_36953945_1	chr5	-	491	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	171	986	171	-986	multi-exon	FALSE	canonical	NA	NA	NA	NA	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTATCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	36953945	36953196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_36953289_36953546
ENSMUSG00000055319.9_128346759_128359519_1	chr7	+	1199	6	ISM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	92	27041	92	-27041	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGTGGGGGACGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	128346758	128359519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486
ENSMUSG00000055319.9_128352066_128365836_1	chr7	+	1264	8	ISM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	5399	20724	5399	-20724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGGAAAGGTCTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	128352065	128365836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664
ENSMUSG00000055319.9_128352173_128365866_1	chr7	+	1187	8	ISM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	5506	20694	5506	-20694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTAGGTAAAGCTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	128352172	128365866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664
ENSMUSG00000055319.9_128365769_128380877_1	chr7	+	1207	9	ISM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	19102	5683	19102	-5683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTCTTCAAGAAAAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	128365768	128380877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786
ENSMUSG00000055319.9_128367907_128385262_1	chr7	+	1211	9	ISM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	21240	1298	21240	-1298	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATGTAGGAATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	128367906	128385262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151
ENSMUSG00000055319.9_128379046_128385850_1	chr7	+	1215	5	ISM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	32379	710	32379	-710	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGAATGCCATCGCCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	128379045	128385850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151
ENSMUSG00000055319.9_128380257_128386016_1	chr7	+	1212	4	ISM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	33590	544	33590	-544	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTGCTGGGATTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	128380256	128386016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_128380339_128380786_128380950_128381359_128381462_128385151
ENSMUSG00000055319.9_128380792_128386163_1	chr7	+	1272	3	ISM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	34125	397	34125	-397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGAGTTGAGCAAATAACAG	NA	NA	NA	NA	NA	NA	NA	NA	128380791	128386163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_128380950_128381359_128381462_128385151
ENSMUSG00000055322.17_74002747_74034531_1	chr1	-	1469	12	FSM	ENSMUSG00000055322.17	ENST00000310858.10	1471	12	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTCACATAATGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	74034531	74002746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_74003158_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359
ENSMUSG00000055334.5_56858162_56885372_1	chr9	+	757	7	ISM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	0	5118	0	-5118	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCCTGTAAGGCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	56858161	56885372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302
ENSMUSG00000055334.5_56864297_56888209_1	chr9	+	771	7	ISM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	6135	2281	6135	-2281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACGAAACCATTATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	56864296	56888209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128
ENSMUSG00000055334.5_56864411_56890011_1	chr9	+	723	8	ISM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	6249	479	6249	-479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCGCCCCTACATGGT	NA	NA	NA	NA	NA	NA	NA	NA	56864410	56890011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
ENSMUSG00000055334.5_56870358_56890193_1	chr9	+	777	7	ISM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	12196	297	12196	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTGTCTACTCCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	56870357	56890193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
ENSMUSG00000055360.14_13357324_13365256_1	chr13	+	572	5	ISM	ENSMUSG00000055360.14	ENSMUST00000126540.8	971	6	23	1252	0	-179	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTCCCTGATATAA	NA	NA	NA	NA	NA	NA	NA	NA	13357323	13365256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13357398_13357501_13357630_13360374_13360551_13363952_13364061_13365170
ENSMUSG00000055360.14_13360373_13366270_1	chr13	+	510	4	ISM	ENSMUSG00000055360.14	ENSMUST00000126540.8	971	6	3072	238	3049	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGACAATGAAGATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	13360372	13366270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13360551_13363952_13364061_13365170_13365354_13366229
ENSMUSG00000055360.14_13360396_13366356_1	chr13	+	573	4	ISM	ENSMUSG00000055360.14	ENSMUST00000126540.8	971	6	3095	152	3072	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACATCCTGAAGTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	13360395	13366356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13360551_13363952_13364061_13365170_13365354_13366229
ENSMUSG00000055360.14_13363953_13366515_1	chr13	+	577	3	ISM	ENSMUSG00000055360.14	ENSMUST00000126540.8	971	6	6652	-7	6629	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAATGGGGAATTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	13363952	13366515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_13364061_13365170_13365354_13366229
ENSMUSG00000055368.15_93687872_93723713_1	chr8	+	1698	12	NNC	ENSMUSG00000055368.15	novel	1719	12	NA	NA	20	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	3272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATGCAGAGCTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	93687871	93723713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_93688150_93697797_93697930_93699379_93699618_93708529_93708669_93716753_93716858_93717970_93718096_93719433_93719547_93720644_93720774_93721261_93721362_93722243_93722345_93722595_93722763_93723641
ENSMUSG00000055368.15_93687872_93723713_2	chr8	+	1697	12	NNC	ENSMUSG00000055368.15	novel	1719	12	NA	NA	20	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	3114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATGCAGAGCTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	93687871	93723713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_93688150_93697797_93697930_93699379_93699618_93708529_93708669_93716753_93716858_93717970_93718096_93719433_93719547_93720644_93720774_93721261_93721362_93722243_93722345_93722594_93722763_93723643
ENSMUSG00000055368.15_93687872_93723713_3	chr8	+	1694	12	NNC	ENSMUSG00000055368.15	novel	1719	12	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATGCAGAGCTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	93687871	93723713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_93688150_93697797_93697930_93699379_93699618_93708529_93708669_93716753_93716858_93717970_93718096_93719433_93719542_93720644_93720774_93721261_93721362_93722243_93722345_93722594_93722763_93723641
ENSMUSG00000055368.15_93687958_93723713_1	chr8	+	1606	12	NNC	ENSMUSG00000055368.15	novel	1719	12	NA	NA	106	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATGCAGAGCTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	93687957	93723713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_93688150_93697797_93697930_93699379_93699618_93708529_93708669_93716753_93716851_93717970_93718096_93719433_93719547_93720644_93720774_93721261_93721362_93722243_93722345_93722594_93722763_93723641
ENSMUSG00000055368.15_93687958_93723713_2	chr8	+	1611	12	NNC	ENSMUSG00000055368.15	novel	1719	12	NA	NA	106	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATGCAGAGCTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	93687957	93723713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_93688150_93697797_93697930_93699379_93699618_93708529_93708669_93716753_93716858_93717970_93718096_93719433_93719547_93720644_93720774_93721261_93721362_93722245_93722345_93722594_93722763_93723641
ENSMUSG00000055368.15_93687958_93723713_3	chr8	+	1610	12	NNC	ENSMUSG00000055368.15	novel	1719	12	NA	NA	106	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATGCAGAGCTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	93687957	93723713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_93688150_93697797_93697930_93699379_93699618_93708529_93708669_93716753_93716858_93717970_93718096_93719436_93719547_93720644_93720774_93721261_93721362_93722243_93722345_93722594_93722763_93723641
ENSMUSG00000055368.15_93687958_93723713_4	chr8	+	1613	12	FSM	ENSMUSG00000055368.15	ENST00000566163.5	1719	12	106	0	106	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATGCAGAGCTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	93687957	93723713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_93688150_93697797_93697930_93699379_93699618_93708529_93708669_93716753_93716858_93717970_93718096_93719433_93719547_93720644_93720774_93721261_93721362_93722243_93722345_93722594_93722763_93723641
ENSMUSG00000055368.15_93688019_93723713_1	chr8	+	1550	12	NNC	ENSMUSG00000055368.15	novel	1719	12	NA	NA	167	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATGCAGAGCTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	93688018	93723713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_93688150_93697797_93697930_93699379_93699618_93708529_93708669_93716753_93716858_93717970_93718096_93719433_93719547_93720644_93720774_93721261_93721362_93722243_93722345_93722594_93722763_93723643
ENSMUSG00000055368.15_93688019_93723713_2	chr8	+	1548	12	NNC	ENSMUSG00000055368.15	novel	1719	12	NA	NA	167	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATGCAGAGCTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	93688018	93723713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_93688150_93697797_93697930_93699379_93699618_93708529_93708669_93716753_93716858_93717970_93718096_93719433_93719547_93720644_93720774_93721265_93721362_93722243_93722345_93722594_93722763_93723641
ENSMUSG00000055368.15_93688019_93723713_3	chr8	+	1550	12	NNC	ENSMUSG00000055368.15	novel	1719	12	NA	NA	167	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATGCAGAGCTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	93688018	93723713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_93688150_93697797_93697930_93699379_93699618_93708529_93708669_93716755_93716858_93717970_93718096_93719433_93719547_93720644_93720774_93721261_93721362_93722243_93722345_93722594_93722763_93723641
ENSMUSG00000055368.15_93688019_93723713_4	chr8	+	1547	12	NNC	ENSMUSG00000055368.15	novel	1719	12	NA	NA	167	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATGCAGAGCTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	93688018	93723713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_93688150_93697797_93697930_93699379_93699618_93708529_93708669_93716753_93716858_93717970_93718096_93719433_93719542_93720644_93720774_93721261_93721362_93722243_93722345_93722594_93722763_93723641
ENSMUSG00000055368.15_93688019_93723713_5	chr8	+	1550	12	NNC	ENSMUSG00000055368.15	novel	1719	12	NA	NA	167	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATGCAGAGCTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	93688018	93723713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_93688150_93697797_93697930_93699379_93699618_93708529_93708669_93716753_93716858_93717972_93718096_93719433_93719547_93720644_93720774_93721261_93721362_93722243_93722345_93722594_93722763_93723641
ENSMUSG00000055368.15_93708585_93715736_1	chr8	+	174	2	ISM	ENSMUSG00000055368.15	ENST00000219833.13	2898	14	20782	12559	20733	-7977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTACTTGCACATTGA	NA	NA	NA	NA	NA	NA	NA	NA	93708584	93715736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_93708669_93715646
ENSMUSG00000055371.18_52583594_52593169_1	chr2	-	1579	3	ISM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	39043	1918	39043	-1918	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGGGAATTTTCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	52593169	52583593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52584950_52590016_52590184_52593113
ENSMUSG00000055371.18_52583661_52593229_1	chr2	-	1572	3	ISM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	38983	1985	38983	-1985	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGAAGCTCCTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	52593229	52583660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52584950_52590016_52590184_52593113
ENSMUSG00000055371.18_52584047_52604876_1	chr2	-	1589	8	ISM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	27336	2371	27336	-2371	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCCAGGAGATGTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	52604876	52584046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829
ENSMUSG00000055371.18_52584110_52604958_1	chr2	-	1608	8	ISM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	27254	2434	27254	-2434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCATGTAAATGCAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	52604958	52584109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829
ENSMUSG00000055371.18_52584336_52606517_1	chr2	-	1591	10	ISM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	25695	2660	25695	-2660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTTGAATTTCCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	52606517	52584335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436
ENSMUSG00000055371.18_52584794_52632192_1	chr2	-	1579	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	20	3118	20	-3118	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCAGTGGCAGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	52632192	52584793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
ENSMUSG00000055401.15_148230856_148236516_1	chr4	-	616	5	ISM	ENSMUSG00000055401.15	ENSMUST00000168503.8	1240	6	76	683	0	-611	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGACTACATTGTCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	148236516	148230855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236469
ENSMUSG00000055401.15_148231328_148236167_1	chr4	-	577	4	ISM	ENSMUSG00000055401.15	ENSMUST00000030858.14	1346	6	203	1084	198	-1083	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCGGCCTGACATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	148236167	148231327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_148231393_148231751_148231879_148233835_148234124_148236070
ENSMUSG00000055407.15_98918082_98986344_1	chr7	+	1806	3	FSM	ENSMUSG00000055407.15	ENSMUST00000208605.2	2275	3	469	0	469	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTCTCTGGCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98918081	98986344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_98918521_98964895_98965110_98985191
ENSMUSG00000055409.15_49625082_49880006_1	chr7	+	880	8	NNC	ENSMUSG00000055409.15	novel	2756	19	NA	NA	0	-218705	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	288	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTCACCAAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	49625081	49880006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_49625192_49632423_49632553_49712365_49712517_49825972_49826070_49869330_49869403_49870001_49870085_49878539_49878675_49879903
ENSMUSG00000055409.15_49625082_49899463_1	chr7	+	956	9	ISM	ENSMUSG00000055409.15	ENST00000325319.9	1387	12	79	199248	0	-199248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATCCATGGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	49625081	49899463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49625192_49632423_49632553_49712365_49712517_49825972_49826070_49869329_49869403_49870001_49870085_49878539_49878675_49879903_49880007_49899388
ENSMUSG00000055409.15_49625082_49907955_1	chr7	+	997	10	ISM	ENSMUSG00000055409.15	ENST00000325319.9	1387	12	79	190756	0	-190756	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGCTCAGAGAAGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	49625081	49907955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49625192_49632423_49632553_49712365_49712517_49825972_49826070_49869329_49869403_49870001_49870085_49878539_49878675_49879903_49880007_49899388_49899463_49907913
ENSMUSG00000055409.15_49632421_49908015_1	chr7	+	950	9	ISM	ENSMUSG00000055409.15	ENST00000325319.9	1387	12	7418	190696	7339	-190696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGGTGTGGCAAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	49632420	49908015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49632553_49712365_49712517_49825972_49826070_49869329_49869403_49870001_49870085_49878539_49878675_49879903_49880007_49899388_49899463_49907913
ENSMUSG00000055409.15_49632498_49929289_1	chr7	+	895	10	ISM	ENSMUSG00000055409.15	ENST00000325319.9	1387	12	7495	169422	7416	-169422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGTGTGGAGAAAACTCG	NA	NA	NA	NA	NA	NA	NA	NA	49632497	49929289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49632553_49712365_49712517_49825972_49826070_49869329_49869403_49870001_49870085_49878539_49878675_49879903_49880007_49899388_49899463_49907913_49908014_49929265
ENSMUSG00000055409.15_49712459_50098641_1	chr7	+	906	10	ISM	ENSMUSG00000055409.15	ENST00000325319.9	1387	12	87456	70	87377	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTTGCCGGGGTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	49712458	50098641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_49712517_49825972_49826070_49869329_49869403_49870001_49870085_49878539_49878675_49879903_49880007_49899388_49899463_49907913_49908014_49929265_49929395_50098587
ENSMUSG00000055436.19_157717376_157719636_1	chr3	-	748	4	ISM	ENSMUSG00000055436.19	ENSMUST00000072875.15	2654	12	17767	820	17639	-435	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGTCTATGATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	157719636	157717375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588
ENSMUSG00000055436.19_157717506_157722090_1	chr3	-	792	5	ISM	ENSMUSG00000055436.19	ENSMUST00000072875.15	2654	12	15313	950	15185	-565	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAAGCTATAAAGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	157722090	157717505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958
ENSMUSG00000055436.19_157717712_157725044_1	chr3	-	764	7	ISM	ENSMUSG00000055436.19	ENSMUST00000072875.15	2654	12	12359	1156	12231	-771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTCGAGAGTCCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	157725044	157717711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948
ENSMUSG00000055436.19_157717988_157728510_1	chr3	-	802	9	ISM	ENSMUSG00000055436.19	ENST00000370951.5	2138	12	8765	1047	8765	-1047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGCGAGAAAGGAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	157728510	157717987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477
ENSMUSG00000055436.19_157719627_157732495_1	chr3	-	781	8	ISM	ENSMUSG00000055436.19	ENST00000370951.5	2138	12	4780	2686	4780	-2686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTACAGCACAGCCAGACG	NA	NA	NA	NA	NA	NA	NA	NA	157732495	157719626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361
ENSMUSG00000055447.20_49676019_49731444_1	chr16	+	1247	9	NIC	ENSMUSG00000055447.20	novel	1271	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGAATCCCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	49676018	49731444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
ENSMUSG00000055447.20_49676019_49734717_1	chr16	+	4583	10	FSM	ENSMUSG00000055447.20	ENSMUST00000084838.14	5250	10	11	656	0	-656	multi-exon	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTGCCACAACCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	49676018	49734717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_49676196_49688127_49688476_49689380_49689444_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
ENSMUSG00000055447.20_49688164_49734896_1	chr16	+	4549	9	ISM	ENSMUSG00000055447.20	ENSMUST00000084838.14	5250	10	12156	477	968	-477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAGCCTTTTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	49688163	49734896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_49688476_49689380_49689444_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
ENSMUSG00000055447.20_49688235_49734952_1	chr16	+	4534	9	ISM	ENSMUSG00000055447.20	ENSMUST00000084838.14	5250	10	12227	421	1039	-421	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGCTATCACGGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	49688234	49734952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_49688476_49689380_49689444_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
ENSMUSG00000055447.20_49688337_49735055_1	chr16	+	4535	9	ISM	ENSMUSG00000055447.20	ENSMUST00000084838.14	5250	10	12329	318	1141	-318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCCATTAACCATTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	49688336	49735055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_49688476_49689380_49689444_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
ENSMUSG00000055447.20_49704544_49735373_1	chr16	+	4635	7	ISM	ENSMUSG00000055447.20	ENSMUST00000084838.14	5250	10	28536	0	17348	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGGTTATTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	49704543	49735373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
ENSMUSG00000055489.9_51196444_51215253_1	chr7	+	503	4	ISM	ENSMUSG00000055489.9	ENST00000683197.1	2550	19	20501	29955	20501	-28400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATTTTGTATTTCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	51196443	51215253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_51196695_51203577_51203692_51205905_51206019_51215228
ENSMUSG00000055489.9_51196615_51216075_1	chr7	+	507	5	ISM	ENSMUSG00000055489.9	ENST00000683197.1	2550	19	20672	29133	20672	-27578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTACTGGAGACTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	51196614	51216075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_51196695_51203577_51203692_51205905_51206019_51215228_51215364_51216010
ENSMUSG00000055489.9_51203643_51220056_1	chr7	+	506	6	ISM	ENSMUSG00000055489.9	ENST00000683197.1	2550	19	27700	25152	27700	-23597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTACGAATGGGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	51203642	51220056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_51203692_51205905_51206019_51215228_51215364_51216010_51216117_51216236_51216298_51220014
ENSMUSG00000055489.9_51215293_51224497_1	chr7	+	537	6	ISM	ENSMUSG00000055489.9	ENST00000683197.1	2550	19	39350	20711	39350	-19156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATGGAAAGCGAAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	51215292	51224497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_51215364_51216010_51216117_51216236_51216298_51220014_51220167_51222747_51222823_51224425
ENSMUSG00000055489.9_51220014_51226306_1	chr7	+	506	4	ISM	ENSMUSG00000055489.9	ENST00000683197.1	2550	19	44071	18902	44071	-17347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAATTTGTGAACTATT	NA	NA	NA	NA	NA	NA	NA	NA	51220013	51226306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_51220167_51222747_51222823_51224425_51224649_51226251
ENSMUSG00000055489.9_51224488_51233534_1	chr7	+	503	4	ISM	ENSMUSG00000055489.9	ENST00000683197.1	2550	19	48545	11674	48545	-10119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGACCTTCAGGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	51224487	51233534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_51224649_51226251_51226422_51229232_51229331_51233460
ENSMUSG00000055489.9_51224550_51233591_1	chr7	+	498	4	ISM	ENSMUSG00000055489.9	ENST00000683197.1	2550	19	48607	11617	48607	-10062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTTCAATCATGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	51224549	51233591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_51224649_51226251_51226422_51229232_51229331_51233460
ENSMUSG00000055489.9_51229281_51237511_1	chr7	+	513	4	ISM	ENSMUSG00000055489.9	ENST00000683197.1	2550	19	53338	7697	53338	-6142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTCCCAACCACACAGT	NA	NA	NA	NA	NA	NA	NA	NA	51229280	51237511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_51229331_51233460_51233592_51235070_51235277_51237385
ENSMUSG00000055489.9_51235120_51245115_1	chr7	+	505	4	ISM	ENSMUSG00000055489.9	ENST00000683197.1	2550	19	59177	93	59177	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTATTGACAATATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	51235119	51245115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_51235277_51237385_51237565_51243371_51243458_51245032
ENSMUSG00000055489.9_51235178_51245184_1	chr7	+	516	4	ISM	ENSMUSG00000055489.9	ENST00000683197.1	2550	19	59235	24	59235	-24	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTCATAATTGAAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	51235177	51245184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_51235277_51237385_51237565_51243371_51243458_51245032
ENSMUSG00000055531.13_117183355_117191961_1	chr10	-	2140	2	ISM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	20873	-1592	20872	1589	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGGAACCCTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	117191961	117183354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117185373_117191839
ENSMUSG00000055531.13_117183446_117191961_1	chr10	-	2049	2	ISM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	20873	-1501	20872	1498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATCAAAAAATACATATACT	NA	NA	NA	NA	NA	NA	NA	NA	117191961	117183445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117185373_117191839
ENSMUSG00000055531.13_117183770_117196431_1	chr10	-	2034	4	ISM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	16403	-1177	16402	1174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGGGTATTTTTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	117196431	117183769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344
ENSMUSG00000055531.13_117183883_117196849_1	chr10	-	2039	5	ISM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	15985	-1064	15984	1061	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAGGTAATGAGCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	117196849	117183882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760
ENSMUSG00000055531.13_117184110_117197070_1	chr10	-	2033	5	ISM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	15764	-837	15763	834	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTAGCATGTGTTATGCA	NA	NA	NA	NA	NA	NA	NA	NA	117197070	117184109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760
ENSMUSG00000055531.13_117184770_117203729_1	chr10	-	2038	9	ISM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	9146	4192	9104	174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTAAGTGTCTATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	117203729	117184769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683
ENSMUSG00000055553.17_70965372_70975754_1	chr8	-	702	6	NNC	ENSMUSG00000055553.17	novel	633	5	NA	NA	-3	674	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACTGTAGTGCCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	70975754	70965371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_70965420_70966586_70966819_70968044_70968147_70971014_70971168_70972586_70972712_70975712
ENSMUSG00000055553.17_70966604_70975754_1	chr8	-	628	5	NNC	ENSMUSG00000055553.17	novel	633	5	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACACATGAAGAATAGCC	NA	NA	NA	NA	NA	NA	NA	NA	70975754	70966603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_70966819_70968044_70968138_70971014_70971168_70972586_70972712_70975712
ENSMUSG00000055553.17_70966777_70972711_1	chr8	-	367	4	ISM	ENSMUSG00000055553.17	ENSMUST00000118850.8	992	5	3218	523	3040	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCCCACCCAGTATCACC	NA	NA	NA	NA	NA	NA	NA	NA	70972711	70966776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586
ENSMUSG00000055553.17_70968045_70975754_1	chr8	-	367	4	ISM	ENSMUSG00000055553.17	ENSMUST00000093456.12	1216	5	76	1999	-3	-705	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGCCCCACTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	70975754	70968044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70968092_70971014_70971168_70972586_70972712_70975712
ENSMUSG00000055567.19_66511134_66546005_1	chr1	+	1415	8	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	3528	188750	3528	-188750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGACTACAAAGATTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	66511133	66546005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66511292_66512389_66512692_66522399_66522524_66524923_66525001_66530150_66530291_66542688_66542951_66544081_66544217_66545788
ENSMUSG00000055567.19_66544082_66564949_1	chr1	+	1432	7	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	36476	169806	36476	-169806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAAGCCACCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	66544081	66564949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66544217_66545788_66546006_66546484_66546626_66548425_66548695_66549708_66550084_66560613_66560761_66564801
ENSMUSG00000055567.19_66545817_66567115_1	chr1	+	1354	7	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	38211	167640	38211	-167640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAGTCTCTCATCACAC	NA	NA	NA	NA	NA	NA	NA	NA	66545816	66567115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66546006_66546484_66546626_66548425_66548695_66549708_66550084_66560613_66560761_66564801_66564950_66567030
ENSMUSG00000055567.19_66546494_66569269_1	chr1	+	1359	7	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	38888	165486	38888	-165486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTCTAAGCCTGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	66546493	66569269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66546626_66548425_66548695_66549708_66550084_66560613_66560761_66564801_66564950_66567030_66567180_66569130
ENSMUSG00000055567.19_66548517_66588965_1	chr1	+	1342	8	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	40911	145790	40911	-145790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACCAGCAGCCAGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	66548516	66588965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66548695_66549708_66550084_66560613_66560761_66564801_66564950_66567030_66567180_66569130_66569298_66569913_66570013_66588886
ENSMUSG00000055567.19_66548583_66589042_1	chr1	+	1353	8	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	40977	145713	40977	-145713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCTCACGATCCCGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	66548582	66589042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66548695_66549708_66550084_66560613_66560761_66564801_66564950_66567030_66567180_66569130_66569298_66569913_66570013_66588886
ENSMUSG00000055567.19_66548648_66589102_1	chr1	+	1348	8	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	41042	145653	41042	-145653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTGTATTTATTTATG	NA	NA	NA	NA	NA	NA	NA	NA	66548647	66589102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66548695_66549708_66550084_66560613_66560761_66564801_66564950_66567030_66567180_66569130_66569298_66569913_66570013_66588886
ENSMUSG00000055567.19_66549950_66657389_1	chr1	+	2441	17	ISM	ENSMUSG00000055567.19	ENST00000272845.10	13297	63	42378	80915	42344	-77366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGACTCGGGAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	66549949	66657389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66550084_66560613_66560746_66564801_66564950_66567030_66567180_66569130_66569298_66569913_66570013_66588886_66589102_66590104_66590212_66591312_66591410_66594085_66594259_66608948_66609162_66629353_66629490_66632823_66632958_66640213_66640380_66647550_66647652_66651246_66651448_66657320
ENSMUSG00000055567.19_66549961_66594201_1	chr1	+	1368	10	ISM	ENSMUSG00000055567.19	ENST00000439458.5	13415	64	42435	144103	42355	-140554	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGAGCCAGGGACAAT	NA	NA	NA	NA	NA	NA	NA	NA	66549960	66594201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66550084_66560613_66560761_66564801_66564950_66567030_66567180_66569130_66569298_66569913_66570013_66588886_66589102_66590104_66590212_66591312_66591410_66594085
ENSMUSG00000055567.19_66560702_66609076_1	chr1	+	1342	10	ISM	ENSMUSG00000055567.19	ENST00000439458.5	13415	64	53176	129228	53096	-125679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGCAGGTCTCCCACCG	NA	NA	NA	NA	NA	NA	NA	NA	66560701	66609076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66560761_66564801_66564950_66567030_66567180_66569130_66569298_66569913_66570013_66588886_66589102_66590104_66590212_66591312_66591410_66594085_66594259_66608948
ENSMUSG00000055567.19_66609081_66662468_1	chr1	+	1348	10	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	101475	72287	101475	-72287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCCAGGACCCCATTAAC	NA	NA	NA	NA	NA	NA	NA	NA	66609080	66662468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66609162_66629353_66629490_66632823_66632958_66640213_66640380_66647550_66647652_66651246_66651448_66657320_66657429_66658583_66658723_66661614_66661797_66662368
ENSMUSG00000055567.19_66632890_66666398_1	chr1	+	1330	10	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	125284	68357	125284	-68357	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCACCTCCAGTACGTCGC	NA	NA	NA	NA	NA	NA	NA	NA	66632889	66666398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66632958_66640213_66640380_66647550_66647652_66651246_66651448_66657320_66657429_66658583_66658723_66661614_66661797_66662368_66662501_66665586_66665774_66666352
ENSMUSG00000055567.19_66640261_66670606_1	chr1	+	1358	10	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	132655	64149	132655	-64149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCCAGCATGCATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	66640260	66670606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66640380_66647550_66647652_66651246_66651448_66657320_66657429_66658583_66658723_66661614_66661797_66662368_66662501_66665586_66665774_66666352_66666482_66670546
ENSMUSG00000055567.19_66651387_66688162_1	chr1	+	2429	18	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	143781	46593	143781	-46593	internal_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGGTTAAAGCTGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	66651386	66688162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66651448_66657320_66657429_66658583_66658723_66661614_66661797_66662368_66662501_66665586_66665774_66666352_66666482_66670546_66670691_66675015_66675117_66676086_66676174_66677072_66677257_66678404_66678500_66679709_66679800_66680774_66680877_66683430_66683612_66685529_66685799_66687539_66687675_66688059
ENSMUSG00000055567.19_66677129_66690741_1	chr1	+	1359	10	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	169523	44014	169523	-44014	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCACATCACTACAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	66677128	66690741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66677257_66678404_66678500_66679709_66679800_66680774_66680877_66683430_66683612_66685529_66685799_66687539_66687675_66688059_66688199_66688832_66688930_66690618
ENSMUSG00000055567.19_66683487_66708331_1	chr1	+	1361	10	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	175881	26424	175881	-26424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACATCATGGAGATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	66683486	66708331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66683612_66685529_66685799_66687539_66687675_66688059_66688199_66688832_66688930_66690618_66690790_66692454_66692548_66693168_66693205_66693542_66693762_66708254
ENSMUSG00000055567.19_66685736_66711876_1	chr1	+	1339	11	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	178130	22879	178130	-22879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATCTCTCACCACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	66685735	66711876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66685799_66687539_66687675_66688059_66688199_66688832_66688930_66690618_66690790_66692454_66692548_66693168_66693205_66693542_66693762_66708254_66708456_66710744_66710869_66711815
ENSMUSG00000055567.19_66687608_66713221_1	chr1	+	1349	11	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	180002	21534	180002	-21534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCTGCTCATCCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	66687607	66713221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66687675_66688059_66688199_66688832_66688930_66690618_66690790_66692454_66692548_66693168_66693205_66693542_66693762_66708254_66708456_66710744_66710869_66711815_66711942_66713145
ENSMUSG00000055567.19_66688140_66714130_1	chr1	+	1335	11	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	180534	20625	180534	-20625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAGGAGCAAGAACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	66688139	66714130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66688199_66688832_66688930_66690618_66690790_66692454_66692548_66693168_66693205_66693542_66693762_66708254_66708456_66710744_66710869_66711815_66711942_66713145_66713270_66714045
ENSMUSG00000055567.19_66690669_66716559_1	chr1	+	1336	10	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	183063	18196	183063	-18196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAAAGGTGGGCGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	66690668	66716559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66690790_66692454_66692548_66693168_66693205_66693542_66693762_66708254_66708456_66710744_66710869_66711815_66711942_66713145_66713270_66714045_66714253_66716474
ENSMUSG00000055567.19_66690721_66716620_1	chr1	+	1345	10	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	183115	18135	183115	-18135	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATCTTCGTTCTCTTGCG	NA	NA	NA	NA	NA	NA	NA	NA	66690720	66716620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66690790_66692454_66692548_66693168_66693205_66693542_66693762_66708254_66708456_66710744_66710869_66711815_66711942_66713145_66713270_66714045_66714253_66716474
ENSMUSG00000055567.19_66693604_66718798_1	chr1	+	1367	9	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	185998	15957	185998	-15957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCTCCAACACAGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	66693603	66718798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66693762_66708254_66708456_66710744_66710869_66711815_66711942_66713145_66713270_66714045_66714253_66716474_66716660_66717223_66717390_66718722
ENSMUSG00000055567.19_66693687_66718872_1	chr1	+	1358	9	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	186081	15883	186081	-15883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCGGACCGATGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	66693686	66718872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66693762_66708254_66708456_66710744_66710869_66711815_66711942_66713145_66713270_66714045_66714253_66716474_66716660_66717223_66717390_66718722
ENSMUSG00000055567.19_66708296_66722380_1	chr1	+	1345	9	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	200690	12375	200690	-12375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCCAGCCACGTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	66708295	66722380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66708456_66710744_66710869_66711815_66711942_66713145_66713270_66714045_66714253_66716474_66716660_66717223_66717390_66718722_66718903_66722307
ENSMUSG00000055567.19_66710777_66731748_1	chr1	+	1358	10	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	203171	3007	203171	-3007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAGACCCTGAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	66710776	66731748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66710869_66711815_66711942_66713145_66713270_66714045_66714253_66716474_66716660_66717223_66717390_66718722_66718903_66722307_66722447_66724774_66724832_66731666
ENSMUSG00000055567.19_66711907_66733580_1	chr1	+	1344	11	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	204301	1175	204301	-1175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGACATATTTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	66711906	66733580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66711942_66713145_66713270_66714045_66714253_66716474_66716660_66717223_66717390_66718722_66718903_66722307_66722447_66724774_66724832_66731666_66731749_66732850_66732963_66733523
ENSMUSG00000055567.19_66714167_66734617_1	chr1	+	1336	10	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	206561	138	206561	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTACAGCATGGAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	66714166	66734617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66714253_66716474_66716660_66717223_66717390_66718722_66718903_66722307_66722447_66724774_66724832_66731666_66731749_66732850_66732963_66733523_66733724_66734488
ENSMUSG00000055567.19_66716473_66734755_1	chr1	+	1390	9	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	208867	0	208867	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATCACAGGAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	66716472	66734755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66716660_66717223_66717390_66718722_66718903_66722307_66722447_66724774_66724832_66731666_66731749_66732850_66732963_66733523_66733724_66734488
ENSMUSG00000055567.19_66717228_66734909_1	chr1	+	1353	8	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	209622	-154	209622	154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTAAAAATCAATAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	66717227	66734909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66717390_66718722_66718903_66722307_66722447_66724774_66724832_66731666_66731749_66732850_66732963_66733523_66733724_66734488
ENSMUSG00000055567.19_66717254_66736073_1	chr1	+	2434	7	ISM	ENSMUSG00000055567.19	ENST00000272845.10	13297	63	209682	2231	209648	1318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGACTATGTTGGCTATA	NA	NA	NA	NA	NA	NA	NA	NA	66717253	66736073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66717390_66718722_66718903_66722307_66722447_66731666_66731749_66732850_66732963_66733523_66733724_66734488
ENSMUSG00000055567.19_66717284_66734954_1	chr1	+	1342	8	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	209678	-199	209678	199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAGGGAAGAACAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	66717283	66734954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66717390_66718722_66718903_66722307_66722447_66724774_66724832_66731666_66731749_66732850_66732963_66733523_66733724_66734488
ENSMUSG00000055567.19_66718858_66735163_1	chr1	+	1310	7	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	211252	-408	211252	408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTAGGTGGCTATATAC	NA	NA	NA	NA	NA	NA	NA	NA	66718857	66735163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66718903_66722307_66722447_66724774_66724832_66731666_66731749_66732850_66732963_66733523_66733724_66734488
ENSMUSG00000055567.19_66718858_66735218_1	chr1	+	1365	7	ISM	ENSMUSG00000055567.19	ENSMUST00000212557.3	9777	64	211252	-463	211252	463	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATTAGAAACTAAACTATA	NA	NA	NA	NA	NA	NA	NA	NA	66718857	66735218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66718903_66722307_66722447_66724774_66724832_66731666_66731749_66732850_66732963_66733523_66733724_66734488
ENSMUSG00000055567.19_66718858_66736309_1	chr1	+	2399	6	ISM	ENSMUSG00000055567.19	ENST00000272845.10	13297	63	211286	1995	211252	1554	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGCCTTTTGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	66718857	66736309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66718903_66722307_66722447_66731666_66731749_66732850_66732963_66733523_66733724_66734488
ENSMUSG00000055567.19_66733585_66736790_1	chr1	+	2441	2	ISM	ENSMUSG00000055567.19	ENST00000272845.10	13297	63	226013	1514	225979	-1514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGTAATGTTTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	66733584	66736790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_66733724_66734488
ENSMUSG00000055612.16_72314249_72315641_1	chr2	+	384	3	ISM	ENSMUSG00000055612.16	ENSMUST00000102691.11	2424	9	7746	1596	7746	-1596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTACTTGAAAAGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	72314248	72315641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72314361_72314942_72315093_72315519
ENSMUSG00000055612.16_72315579_72316380_1	chr2	+	395	2	ISM	ENSMUSG00000055612.16	ENSMUST00000102691.11	2424	9	9076	857	9076	-857	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTGATCAGGACATACC	NA	NA	NA	NA	NA	NA	NA	NA	72315578	72316380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_72315657_72316063
ENSMUSG00000055632.19_31225463_31290189_1	chr2	+	6561	43	ISM	ENSMUSG00000055632.19	ENST00000683500.1	15227	98	21037	60216	21036	-60216	internal_fragment	TRUE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGAATCAGAACCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	31225462	31290189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31225585_31226518_31226642_31233067_31233240_31234023_31234131_31234480_31234602_31236473_31236738_31239989_31240135_31240530_31240653_31242620_31242894_31243727_31243870_31244177_31244306_31244633_31244748_31246235_31246386_31250892_31251082_31251808_31251905_31252169_31252298_31254228_31254374_31258962_31259076_31259185_31259343_31260792_31260959_31268252_31268381_31270239_31270495_31271053_31271141_31272338_31272534_31273661_31273793_31274051_31274200_31274850_31274978_31275161_31275317_31276622_31276902_31278178_31278458_31279014_31279124_31279266_31279437_31280951_31281107_31281441_31281539_31282141_31282238_31282973_31283151_31284700_31284859_31286032_31286157_31286655_31286832_31287487_31287585_31287700_31287821_31288892_31289055_31290030
ENSMUSG00000055633.7_5054657_5056067_1	chr7	+	321	2	FSM	ENSMUSG00000055633.7	ENSMUST00000069324.7	1096	2	120	655	120	-267	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGGTCCTCGCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	5054656	5056067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_5054714_5055803
ENSMUSG00000055639.17_98025960_98068746_1	chr14	-	1326	4	ISM	ENSMUSG00000055639.17	ENSMUST00000071533.13	5219	12	338233	1671	338233	-1664	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTGAGTACCCCAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	98068746	98025959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_98027056_98065177_98065247_98065676_98065821_98068729
ENSMUSG00000055639.17_98026021_98068795_1	chr14	-	1314	4	ISM	ENSMUSG00000055639.17	ENSMUST00000071533.13	5219	12	338184	1732	338184	-1725	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTTATACATCTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	98068795	98026020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_98027056_98065177_98065247_98065676_98065821_98068729
ENSMUSG00000055639.17_98026173_98077581_1	chr14	-	1301	5	ISM	ENSMUSG00000055639.17	ENSMUST00000071533.13	5219	12	329398	1884	329398	-1877	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTATTATGTATGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	98077581	98026172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_98027056_98065177_98065247_98065676_98065821_98068729_98068878_98077524
ENSMUSG00000055639.17_98026299_98207282_1	chr14	-	1310	6	ISM	ENSMUSG00000055639.17	ENST00000611519.4	4826	8	199911	2003	199697	-2003	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATATATAAATATAACAT	NA	NA	NA	NA	NA	NA	NA	NA	98207282	98026298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_98027056_98065177_98065247_98065676_98065821_98068729_98068878_98077524_98077677_98207242
ENSMUSG00000055639.17_98026356_98207346_1	chr14	-	1317	6	ISM	ENSMUSG00000055639.17	ENST00000611519.4	4826	8	199847	2060	199633	-2060	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGCCAAACGGTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	98207346	98026355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_98027056_98065177_98065247_98065676_98065821_98068729_98068878_98077524_98077677_98207242
ENSMUSG00000055639.17_98026484_98256394_1	chr14	-	1328	7	ISM	ENSMUSG00000055639.17	ENST00000611519.4	4826	8	150799	2188	150585	-2188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAACTCTATAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	98256394	98026483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_98027056_98065177_98065247_98065676_98065821_98068729_98068878_98077524_98077677_98207242_98207405_98256313
ENSMUSG00000055639.17_98026547_98256432_1	chr14	-	1303	7	ISM	ENSMUSG00000055639.17	ENST00000611519.4	4826	8	150761	2251	150547	-2251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGTCATAGAGGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	98256432	98026546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_98027056_98065177_98065247_98065676_98065821_98068729_98068878_98077524_98077677_98207242_98207405_98256313
ENSMUSG00000055639.17_98026675_98406052_1	chr14	-	1306	8	FSM	ENSMUSG00000055639.17	ENST00000611519.4	4826	8	1141	2379	927	-2379	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGAACTTTTTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	98406052	98026674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_98027056_98065177_98065247_98065676_98065821_98068729_98068878_98077524_98077677_98207242_98207405_98256313_98256430_98405918
ENSMUSG00000055639.17_98026791_98406186_1	chr14	-	1324	8	FSM	ENSMUSG00000055639.17	ENST00000611519.4	4826	8	1007	2495	793	-2495	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATCAAAGTTCTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	98406186	98026790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_98027056_98065177_98065247_98065676_98065821_98068729_98068878_98077524_98077677_98207242_98207405_98256313_98256430_98405918
ENSMUSG00000055639.17_98026868_98406246_1	chr14	-	1307	8	FSM	ENSMUSG00000055639.17	ENST00000611519.4	4826	8	947	2572	733	-2572	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGAAAAGTTTCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	98406246	98026867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_98027056_98065177_98065247_98065676_98065821_98068729_98068878_98077524_98077677_98207242_98207405_98256313_98256430_98405918
ENSMUSG00000055639.17_98065192_98406450_1	chr14	-	1309	7	ISM	ENSMUSG00000055639.17	ENST00000611519.4	4826	8	743	40896	529	-40896	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGACAATACAAGGTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	98406450	98065191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_98065247_98065676_98065821_98068729_98068878_98077524_98077677_98207242_98207405_98256313_98256430_98405918
ENSMUSG00000055639.17_98065774_98406599_1	chr14	-	1306	6	ISM	ENSMUSG00000055639.17	ENST00000611519.4	4826	8	594	41478	380	-41478	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGGAGGCACTAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	98406599	98065773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_98065821_98068729_98068878_98077524_98077677_98207242_98207405_98256313_98256430_98405918
ENSMUSG00000055639.17_98068786_98406706_1	chr14	-	1310	5	ISM	ENSMUSG00000055639.17	ENST00000611519.4	4826	8	487	44490	273	-44490	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAACTAAGAGAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	98406706	98068785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_98068878_98077524_98077677_98207242_98207405_98256313_98256430_98405918
ENSMUSG00000055639.17_98068829_98406784_1	chr14	-	1345	5	ISM	ENSMUSG00000055639.17	ENST00000611519.4	4826	8	409	44533	195	-44533	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAACTGGAAAAAACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	98406784	98068828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_98068878_98077524_98077677_98207242_98207405_98256313_98256430_98405918
ENSMUSG00000055639.17_98077614_98406024_1	chr14	-	285	3	ISM	ENSMUSG00000055639.17	ENST00000620444.4	4664	7	1169	53318	955	-53318	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGACAACCACTACCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	98406024	98077613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_98077677_98256313_98256430_98405918
ENSMUSG00000055639.17_98207243_98406979_1	chr14	-	1339	3	ISM	ENSMUSG00000055639.17	ENSMUST00000071533.13	5219	12	0	182954	0	-182947	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTAATGTTCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	98406979	98207242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_98207405_98256313_98256430_98405918
ENSMUSG00000055639.17_98256312_98407201_1	chr14	-	1401	2	ISM	ENSMUSG00000055639.17	ENST00000611519.4	4826	8	-8	232016	-8	-232016	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAGTGATTATTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	98407201	98256311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_98256430_98405918
ENSMUSG00000055652.15_75498086_75517059_1	chr7	+	2122	2	FSM	ENSMUSG00000055652.15	ENSMUST00000206019.2	2299	2	-3	180	0	-176	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTGCAGTGGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	75498085	75517059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_75498233_75515084
ENSMUSG00000055660.10_95034676_95055439_1	chr17	-	1328	7	FSM	ENSMUSG00000055660.10	ENST00000319888.10	1328	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAAGTTGTGCTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	95055439	95034675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_95034824_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044
ENSMUSG00000055660.10_95034676_95055845_1	chr17	-	1763	7	ISM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	1602	163	-406	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAAGTTGTGCTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	95055845	95034675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044
ENSMUSG00000055660.10_95040554_95056911_1	chr17	-	1676	7	ISM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	536	6041	409	-5878	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTTCTTCACTCACA	NA	NA	NA	NA	NA	NA	NA	NA	95056911	95040553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95056813
ENSMUSG00000055660.10_95042798_95057105_1	chr17	-	1674	5	ISM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	342	8285	215	-8122	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAAGTTGTTGCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	95057105	95042797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95056813
ENSMUSG00000055660.10_95046879_95057320_1	chr17	-	1751	4	ISM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	127	12366	0	-12203	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGATCACTTACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	95057320	95046878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_95046952_95047813_95048184_95055044_95055846_95056813
ENSMUSG00000055681.15_70755168_70765640_1	chr8	+	1292	10	NNC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	70755167	70765640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_70755583_70757291_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ENSMUSG00000055681.15_70755168_70765640_2	chr8	+	1295	10	NNC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	70755167	70765640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764282_70764347_70765355_70765431_70765508
ENSMUSG00000055681.15_70755168_70765640_3	chr8	+	1294	10	NNC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	70755167	70765640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_70755583_70757283_70757347_70758284_70758386_70759154_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ENSMUSG00000055681.15_70755168_70765640_4	chr8	+	1294	10	NNC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	70755167	70765640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_70755577_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ENSMUSG00000055681.15_70758348_70760654_1	chr8	+	286	3	ISM	ENSMUSG00000055681.15	ENST00000600932.5	920	9	2891	4777	2891	-4777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCCAGATGGCAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	70758347	70760654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70758386_70759148_70759302_70760559
ENSMUSG00000055681.15_70761157_70765431_1	chr8	+	215	3	ISM	ENSMUSG00000055681.15	ENST00000349893.8	724	8	5700	0	5700	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAGGGCAGTTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	70761156	70765431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_70761227_70764277_70764347_70765355
ENSMUSG00000055707.14_70903192_70908272_1	chr8	-	2533	2	ISM	ENSMUSG00000055707.14	ENSMUST00000210250.2	2974	3	21327	315	20276	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCCTCATTCGATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	70908272	70903191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70905568_70908115
ENSMUSG00000055707.14_70903330_70929555_1	chr8	-	2477	3	FSM	ENSMUSG00000055707.14	ENSMUST00000210250.2	2974	3	44	453	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGGCCTGTGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	70929555	70903329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_70905568_70908115_70908299_70929499
ENSMUSG00000055707.14_70905156_70908164_1	chr8	-	563	2	ISM	ENSMUSG00000055707.14	ENSMUST00000209567.2	2615	3	20384	1826	20384	-1826	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGGACAGCGTGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	70908164	70905155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70905670_70908115
ENSMUSG00000055717.14_103921672_103942353_1	chr14	+	1853	5	NNC	ENSMUSG00000055717.14	novel	1858	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3925	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCATGAATGTGCAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	103921671	103942353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_103921820_103923104_103923255_103932608_103932760_103939952_103940275_103941271
ENSMUSG00000055717.14_103921672_103942353_2	chr14	+	1858	5	FSM	ENSMUSG00000055717.14	ENST00000314070.9	1858	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCATGAATGTGCAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	103921671	103942353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_103921820_103923104_103923255_103932603_103932760_103939952_103940275_103941271
ENSMUSG00000055717.14_103921759_103942353_1	chr14	+	2113	6	FSM	ENSMUSG00000055717.14	ENST00000358679.3	2101	6	0	-12	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCATGAATGTGCAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	103921758	103942353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_103921820_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
ENSMUSG00000055717.14_103923235_103925618_1	chr14	+	221	2	ISM	ENSMUSG00000055717.14	ENST00000351546.7	2132	5	130	16735	130	-16723	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGAGGAAGAGTTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	103923234	103925618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_103923335_103925497
ENSMUSG00000055717.14_103925681_103932660_1	chr14	+	216	2	ISM	ENSMUSG00000055717.14	ENST00000351546.7	2132	5	2576	9693	2576	-9681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAACCTCAGCTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	103925680	103932660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_103925840_103932603
ENSMUSG00000055717.14_103925725_103932717_1	chr14	+	229	2	ISM	ENSMUSG00000055717.14	ENST00000351546.7	2132	5	2620	9636	2620	-9624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGAGCTGGAAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	103925724	103932717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_103925840_103932603
ENSMUSG00000055720.11_57818262_57829901_1	chr9	+	992	9	ISM	ENSMUSG00000055720.11	ENSMUST00000163329.2	1364	11	-7	7350	0	-7348	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGAGAGAGGGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	57818261	57829901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57818343_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733
ENSMUSG00000055720.11_57818392_57829774_1	chr9	+	847	9	ISM	ENSMUSG00000055720.11	ENSMUST00000216841.2	1426	11	75	7475	75	-7475	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGCCTCCCTGGGATACA	NA	NA	NA	NA	NA	NA	NA	NA	57818391	57829774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57818455_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733
ENSMUSG00000055720.11_57820095_57837015_1	chr9	+	880	10	ISM	ENSMUSG00000055720.11	ENSMUST00000216841.2	1426	11	1778	234	1778	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAGTTGCGTGACATGG	NA	NA	NA	NA	NA	NA	NA	NA	57820094	57837015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ENSMUSG00000055720.11_57821931_57837146_1	chr9	+	878	9	ISM	ENSMUSG00000055720.11	ENSMUST00000216841.2	1426	11	3614	103	3614	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACCTAGCAAATTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	57821930	57837146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ENSMUSG00000055720.11_57826591_57837251_1	chr9	+	958	8	ISM	ENSMUSG00000055720.11	ENSMUST00000216841.2	1426	11	8274	-2	8274	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	868	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	57826590	57837251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ENSMUSG00000055723.7_113646017_113717016_1	chr7	-	2266	6	NNC	ENSMUSG00000055723.7	novel	2275	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGCTTGACGGCTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	113717016	113646016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_113647487_113649535_113649646_113657774_113657884_113658161_113658265_113659566_113659655_113716630
ENSMUSG00000055737.13_3357007_3377083_1	chr15	-	840	5	NNC	ENSMUSG00000055737.13	novel	1171	9	NA	NA	124043	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAGAATTTGTTTCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	3377083	3357006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_3357169_3357455_3357625_3362828_3363008_3370400_3370574_3376926
ENSMUSG00000055737.13_3357021_3418160_1	chr15	-	854	7	ISM	ENSMUSG00000055737.13	ENSMUST00000110697.9	1213	9	82966	0	82966	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTTAAAAATTAACAACAG	NA	NA	NA	NA	NA	NA	NA	NA	3418160	3357020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_3357169_3357455_3357625_3362828_3363008_3370400_3370574_3375990_3376015_3376953_3377084_3418129
ENSMUSG00000055737.13_3357556_3612546_1	chr15	-	785	8	ISM	ENSMUSG00000055737.13	ENSMUST00000110698.9	1171	9	124	549	124	-535	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGATCCAGACAACGGAG	NA	NA	NA	NA	NA	NA	NA	NA	3612546	3357555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_3357625_3362828_3363008_3370400_3370574_3375990_3376015_3376953_3377084_3418129_3418196_3487411_3487491_3612481
ENSMUSG00000055737.13_3357610_3612670_1	chr15	-	855	8	ISM	ENSMUSG00000055737.13	ENSMUST00000110698.9	1171	9	0	603	0	-589	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACATACTGTCCAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	3612670	3357609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_3357625_3362828_3363008_3370400_3370574_3375990_3376015_3376953_3377084_3418129_3418196_3487411_3487491_3612481
ENSMUSG00000055760.13_80531983_80535768_1	chr17	+	863	3	FSM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	113	158	113	-158	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAGATTTGAAAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	80531982	80535768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_80532100_80533049_80533194_80535166
ENSMUSG00000055760.13_80533050_80535926_1	chr17	+	904	2	ISM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	1180	0	1180	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATATTTCTATTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	80533049	80535926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_80533194_80535166
ENSMUSG00000055762.17_75767027_75768267_1	chr15	-	779	3	NNC	ENSMUSG00000055762.17	novel	704	5	NA	NA	12852	310	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGAAATCCTGCGAACATC	NA	NA	NA	NA	NA	NA	NA	NA	75768267	75767026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_75767435_75767580_75767776_75768091
ENSMUSG00000055762.17_75767037_75767761_1	chr15	-	585	2	ISM	ENSMUSG00000055762.17	ENST00000419152.7	1067	8	13358	-310	13358	300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATAGTGCTCGTGAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	75767761	75767036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75767441_75767580
ENSMUSG00000055762.17_75767337_75768589_1	chr15	-	622	4	ISM	ENSMUSG00000055762.17	ENST00000419152.7	1067	8	12530	-10	12530	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	75768589	75767336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488
ENSMUSG00000055762.17_75767337_75781140_1	chr15	-	1098	8	FSM	ENSMUSG00000055762.17	ENST00000419152.7	1067	8	-21	-10	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	75781140	75767336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773238_75781093
ENSMUSG00000055762.17_75767653_75772602_1	chr15	-	609	5	ISM	ENSMUSG00000055762.17	ENST00000419152.7	1067	8	8517	306	8517	-306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGTGGTGGAGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	75772602	75767652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539
ENSMUSG00000055762.17_75767653_75781140_1	chr15	-	717	6	ISM	ENSMUSG00000055762.17	ENSMUST00000109972.9	1624	7	43	1004	6	-306	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGTGGTGGAGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	75781140	75767652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773105_75781093
ENSMUSG00000055762.17_75768123_75773104_1	chr15	-	588	5	ISM	ENSMUSG00000055762.17	ENST00000419152.7	1067	8	8015	776	8015	-776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATCCTCCATCCTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	75773104	75768122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980
ENSMUSG00000055799.14_72603361_72608980_1	chr6	-	1802	5	ISM	ENSMUSG00000055799.14	ENSMUST00000069536.12	3042	12	157257	0	156955	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTCTCTGGATGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	72608980	72603360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938
ENSMUSG00000055799.14_72603361_72609042_1	chr6	-	1864	5	ISM	ENSMUSG00000055799.14	ENSMUST00000069536.12	3042	12	157195	0	156893	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTCTCTGGATGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	72609042	72603360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938
ENSMUSG00000055799.14_72603926_72765301_1	chr6	-	1848	10	ISM	ENSMUSG00000055799.14	ENSMUST00000069536.12	3042	12	936	565	634	329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCCCCACCGTATCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	72765301	72603925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72626102_72626187_72765193
ENSMUSG00000055799.14_72604255_72765935_1	chr6	-	1846	12	FSM	ENSMUSG00000055799.14	ENSMUST00000069536.12	3042	12	302	894	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTCAATATTTGACCACT	NA	NA	NA	NA	NA	NA	NA	NA	72765935	72604254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72626102_72626187_72765193_72765322_72765544_72765609_72765692
ENSMUSG00000055817.19_84013620_84083097_1	chr17	+	853	9	ISM	ENSMUSG00000055817.19	ENSMUST00000067826.15	2087	17	0	39237	0	-17205	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGGACGAGATGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	84013619	84083097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070342_84070443_84073935_84074036_84083010
ENSMUSG00000055817.19_84015826_84083199_1	chr17	+	862	8	ISM	ENSMUSG00000055817.19	ENSMUST00000067826.15	2087	17	2206	39135	0	-17103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGGAAAGCTGCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	84015825	84083199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070342_84070443_84073935_84074036_84083010
ENSMUSG00000055817.19_84022041_84074035_1	chr17	+	608	6	ISM	ENSMUSG00000055817.19	ENSMUST00000112350.8	1723	14	8449	26267	6202	-26267	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAAGGCTTTTGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	84022040	84074035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935
ENSMUSG00000055817.19_84022041_84089405_1	chr17	+	872	8	ISM	ENSMUSG00000055817.19	ENSMUST00000112350.8	1723	14	8449	10897	6202	-10897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTTCCATGCTACCCC	NA	NA	NA	NA	NA	NA	NA	NA	84022040	84089405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330
ENSMUSG00000055817.19_84045783_84083117_1	chr17	+	594	6	ISM	ENSMUSG00000055817.19	ENSMUST00000112350.8	1723	14	32191	17185	29944	-17185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGGCCTCTGAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	84045782	84083117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010
ENSMUSG00000055817.19_84070372_84100066_1	chr17	+	861	8	ISM	ENSMUSG00000055817.19	ENSMUST00000112350.8	1723	14	56780	236	54533	-236	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTTCCTTCGTACTAC	NA	NA	NA	NA	NA	NA	NA	NA	84070371	84100066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
ENSMUSG00000055817.19_84073935_84100193_1	chr17	+	918	7	ISM	ENSMUSG00000055817.19	ENSMUST00000112350.8	1723	14	60343	109	58096	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACGCTTTTCAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	84073934	84100193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
ENSMUSG00000055817.19_84083010_84100304_1	chr17	+	929	6	ISM	ENSMUSG00000055817.19	ENSMUST00000112350.8	1723	14	69418	-2	67171	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTTGTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	84083009	84100304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
ENSMUSG00000055817.19_84091704_84107565_1	chr17	+	642	5	ISM	ENSMUSG00000055817.19	ENSMUST00000112352.10	2674	16	78112	5287	75865	-5287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTATCGCCCGACACAG	NA	NA	NA	NA	NA	NA	NA	NA	84091703	84107565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_84091765_84096349_84096472_84099081_84099231_84099970_84100194_84107478
ENSMUSG00000055817.19_84096350_84122334_1	chr17	+	998	6	ISM	ENSMUSG00000055817.19	ENSMUST00000067826.15	2087	17	82730	0	80511	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGTTTATTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	84096349	84122334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_84096472_84099081_84099231_84099970_84100194_84107478_84107566_84111879_84112027_84122064
ENSMUSG00000055817.19_84099081_84127645_1	chr17	+	644	5	ISM	ENSMUSG00000055817.19	ENST00000405592.5	2217	16	83242	466	83242	-466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCCTGTACTCCAACAT	NA	NA	NA	NA	NA	NA	NA	NA	84099080	84127645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_84099231_84099970_84100194_84107478_84107566_84111879_84112027_84127608
ENSMUSG00000055817.19_84100014_84127783_1	chr17	+	589	4	ISM	ENSMUSG00000055817.19	ENST00000405592.5	2217	16	84175	328	84175	-328	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACACAGTCTGGATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	84100013	84127783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_84100194_84107478_84107566_84111879_84112027_84127608
ENSMUSG00000055817.19_84107502_84127979_1	chr17	+	582	3	ISM	ENSMUSG00000055817.19	ENST00000405592.5	2217	16	91663	132	91663	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCATGTGTGCACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	84107501	84127979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_84107566_84111879_84112027_84127608
ENSMUSG00000055817.19_84111878_84128112_1	chr17	+	653	2	ISM	ENSMUSG00000055817.19	ENST00000405592.5	2217	16	96039	-1	96039	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTATCTCTTGGCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	84111877	84128112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_84112027_84127608
ENSMUSG00000055835.11_112370033_112396351_1	chr8	+	641	4	FSM	ENSMUSG00000055835.11	ENSMUST00000212072.2	1930	4	0	1289	0	-963	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTGTAAGAAAGAAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	112370032	112396351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_112370245_112385017_112385074_112392692_112392837_112396122
ENSMUSG00000055835.11_112392751_112396617_1	chr8	+	581	2	ISM	ENSMUSG00000055835.11	ENSMUST00000211926.2	1409	4	22582	697	22582	-697	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGTGTGCCAGAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	112392750	112396617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_112392837_112396122
ENSMUSG00000055839.7_24043714_24048110_1	chr17	-	526	4	NNC	ENSMUSG00000055839.7	novel	537	4	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCATTTCTCATTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	24048110	24043713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_24043954_24046441_24046539_24047817_24047953_24048056
ENSMUSG00000055850.13_72336697_72338522_1	chr6	-	1242	4	ISM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	893	0	843	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	72338522	72336696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394
ENSMUSG00000055850.13_72336697_72338522_2	chr6	-	1237	4	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	843	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	72338522	72336696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_72337626_72337857_72337933_72338104_72338210_72338394
ENSMUSG00000055850.13_72336697_72338525_1	chr6	-	1237	4	NNC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	840	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	72338525	72336696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_72337618_72337857_72337933_72338099_72338210_72338394
ENSMUSG00000055850.13_72336855_72339327_1	chr6	-	1180	5	NNC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	38	-158	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTCTTAGTTTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	72339327	72336854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_72337618_72337857_72337933_72338099_72338210_72338394_72338523_72339223
ENSMUSG00000055850.13_72336855_72339327_2	chr6	-	1183	5	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	38	-158	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTCTTAGTTTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	72339327	72336854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_72337626_72337857_72337933_72338104_72338210_72338394_72338523_72339223
ENSMUSG00000055850.13_72336855_72339327_3	chr6	-	1188	5	FSM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	88	158	38	-158	multi-exon	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTCTTAGTTTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	72339327	72336854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
ENSMUSG00000055850.13_72336855_72339415_1	chr6	-	1276	5	FSM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	0	158	0	-158	multi-exon	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTCTTAGTTTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	72339415	72336854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
ENSMUSG00000055912.9_72333112_72336028_1	chr6	+	733	7	ISM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	682	717	682	-717	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTGCTCTGTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	72333111	72336028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
ENSMUSG00000055912.9_72333209_72336080_1	chr6	+	688	7	ISM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	779	665	779	-665	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACCTTCAGCTATGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	72333208	72336080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
ENSMUSG00000055912.9_72333209_72336128_1	chr6	+	736	7	ISM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	779	617	779	-617	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCACTACAGCCTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	72333208	72336128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
ENSMUSG00000055912.9_72334045_72336284_1	chr6	+	745	5	ISM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	1615	461	1615	-461	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTTATTTTGTACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	72334044	72336284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
ENSMUSG00000055912.9_72334082_72336330_1	chr6	+	754	5	ISM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	1652	415	1652	-415	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAGGCTTCCTTACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	72334081	72336330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
ENSMUSG00000055912.9_72335383_72336457_1	chr6	+	683	3	ISM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	2953	288	2953	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCACCTGTCCTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	72335382	72336457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72335419_72335561_72335740_72335988
ENSMUSG00000055912.9_72335692_72336613_1	chr6	+	673	2	ISM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	3262	132	3262	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCCACCCAGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	72335691	72336613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72335740_72335988
ENSMUSG00000055917.16_40365045_40379594_1	chr12	-	1485	7	ISM	ENSMUSG00000055917.16	ENSMUST00000069692.10	2438	13	116179	0	116179	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCATTTTTACTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	40379594	40365044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483
ENSMUSG00000055917.16_40365235_40413172_1	chr12	-	1427	9	ISM	ENSMUSG00000055917.16	ENSMUST00000069692.10	2438	13	82601	190	82601	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTTACAAACCCCATAGA	NA	NA	NA	NA	NA	NA	NA	NA	40413172	40365234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132
ENSMUSG00000055917.16_40365379_40414097_1	chr12	-	1343	10	ISM	ENSMUSG00000055917.16	ENSMUST00000069692.10	2438	13	81676	334	81676	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTGTACTAAATTGGG	NA	NA	NA	NA	NA	NA	NA	NA	40414097	40365378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080
ENSMUSG00000055917.16_40365427_40414151_1	chr12	-	1349	10	ISM	ENSMUSG00000055917.16	ENSMUST00000069692.10	2438	13	81622	382	81622	-382	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTTCCTACAGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	40414151	40365426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080
ENSMUSG00000055917.16_40365549_40428767_1	chr12	-	1341	11	ISM	ENSMUSG00000055917.16	ENSMUST00000069692.10	2438	13	67006	504	67006	-504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAACTTTGTCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	40428767	40365548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671
ENSMUSG00000055917.16_40365695_40495773_1	chr12	-	1410	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	128	650	0	-650	multi-exon	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACCTGGTTTTCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	40495773	40365694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
ENSMUSG00000055917.16_40365745_40495773_1	chr12	-	1360	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	128	700	0	-700	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTCCAGGGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	40495773	40365744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
ENSMUSG00000055917.16_40365812_40495832_1	chr12	-	1352	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	69	767	-59	-767	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCCGTCATCAGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	40495832	40365811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
ENSMUSG00000055932.16_92040153_92252228_1	chr8	+	1615	9	FSM	ENSMUSG00000055932.16	ENST00000636218.1	2086	9	56	415	0	-415	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAAGCTCTTAGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	92040152	92252228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249547_92252041
ENSMUSG00000055932.16_92040153_92252286_1	chr8	+	1673	9	FSM	ENSMUSG00000055932.16	ENST00000636218.1	2086	9	56	357	0	-357	multi-exon	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATCCCAGGATCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	92040152	92252286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249547_92252041
ENSMUSG00000055932.16_92040196_92252343_1	chr8	+	1687	9	FSM	ENSMUSG00000055932.16	ENST00000636218.1	2086	9	99	300	0	-300	multi-exon	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATATGGAAGTTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	92040195	92252343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249547_92252041
ENSMUSG00000055932.16_92128433_92168377_1	chr8	+	167	2	FSM	ENSMUSG00000055932.16	ENST00000640179.1	167	2	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGAGACACCAGGATTAACA	NA	NA	NA	NA	NA	NA	NA	NA	92128432	92168377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_92128513_92168290
ENSMUSG00000055932.16_92128467_92393016_1	chr8	+	1385	8	ISM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	88314	2051	34	-2051	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGGTTTCCGAGCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	92128466	92393016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ENSMUSG00000055932.16_92128487_92252458_1	chr8	+	1697	8	ISM	ENSMUSG00000055932.16	ENST00000636218.1	2086	9	88390	185	54	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTTCCTTACCAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	92128486	92252458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249547_92252041
ENSMUSG00000055932.16_92136074_92393298_1	chr8	+	1398	7	ISM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	95921	1769	7641	-1769	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCCCCCACACACACCT	NA	NA	NA	NA	NA	NA	NA	NA	92136073	92393298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ENSMUSG00000055932.16_92136202_92393425_1	chr8	+	1397	7	ISM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	96049	1642	7769	-1642	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCATAGGGTGACAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	92136201	92393425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ENSMUSG00000055932.16_92136347_92393574_1	chr8	+	1401	7	ISM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	96194	1493	7914	-1493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGGCGCATGCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	92136346	92393574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ENSMUSG00000055932.16_92168332_92393726_1	chr8	+	1389	6	ISM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	128179	1341	39899	-1341	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCCTCTGAGAGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	92168331	92393726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ENSMUSG00000055932.16_92194944_92393861_1	chr8	+	1422	5	ISM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	154791	1206	66511	-1206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCTGTGGAGCTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	92194943	92393861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ENSMUSG00000055932.16_92201006_92393976_1	chr8	+	1387	4	ISM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	160853	1091	72573	-1091	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGGACTCCGATTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	92201005	92393976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_92201081_92211786_92211907_92249399_92249525_92392909
ENSMUSG00000055932.16_92201061_92394030_1	chr8	+	1386	4	ISM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	160908	1037	72628	-1037	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTTTGCATGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	92201060	92394030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_92201081_92211786_92211907_92249399_92249525_92392909
ENSMUSG00000055932.16_92249503_92394252_1	chr8	+	1365	2	ISM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	209350	815	121070	-815	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGCCGTCTTGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	92249502	92394252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_92249525_92392909
ENSMUSG00000055943.6_112285342_112300713_1	chr2	+	4032	5	FSM	ENSMUSG00000055943.6	ENSMUST00000069747.6	5826	5	0	1794	0	-1794	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTGGAGAAGTAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	112285341	112300713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_112285646_112289804_112289925_112293145_112293285_112295081_112295163_112297325
ENSMUSG00000055943.6_112289805_112301051_1	chr2	+	4066	4	ISM	ENSMUSG00000055943.6	ENSMUST00000069747.6	5826	5	4463	1456	4463	-1456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTGGGAAAGAGATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	112289804	112301051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112289925_112293145_112293285_112295081_112295163_112297325
ENSMUSG00000055943.6_112295102_112301253_1	chr2	+	3989	2	ISM	ENSMUSG00000055943.6	ENSMUST00000069747.6	5826	5	9760	1254	9760	-1254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAGCAACCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	112295101	112301253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112295163_112297325
ENSMUSG00000056004.17_9495427_9529250_1	chr5	+	853	7	ISM	ENSMUSG00000056004.17	ENST00000416314.5	3037	20	65151	335	65151	-335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAGAGACAATGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	9495426	9529250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_9495554_9496893_9496991_9497719_9497822_9509179_9509307_9511321_9511501_9512868_9513035_9529195
ENSMUSG00000056004.17_9509233_9529585_1	chr5	+	809	4	ISM	ENSMUSG00000056004.17	ENST00000416314.5	3037	20	78957	0	78957	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATAAACATATGCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	9509232	9529585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_9509307_9511321_9511501_9512868_9513035_9529195
ENSMUSG00000056076.14_140405365_140411109_1	chr5	+	310	2	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	282	18006	282	-18006	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCGACTTGAGAAACTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	140405364	140411109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140405582_140411016
ENSMUSG00000056076.14_140405528_140412269_1	chr5	+	325	3	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	445	16846	445	-16846	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCACACGTTCCGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	140405527	140412269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140405582_140411016_140411210_140412191
ENSMUSG00000056076.14_140411140_140412817_1	chr5	+	294	4	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	6057	16298	6057	-16298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGTGATTTTTGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	140411139	140412817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140411210_140412191_140412312_140412537_140412596_140412771
ENSMUSG00000056076.14_140412244_140413201_1	chr5	+	292	4	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	7161	15914	7161	-15914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTACCTGGCCACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	140412243	140413201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140412312_140412537_140412596_140412771_140412901_140413164
ENSMUSG00000056076.14_140412845_140415819_1	chr5	+	227	3	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	7762	13296	7762	-13296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCCCTCTGATGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	140412844	140415819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140412901_140413164_140413323_140415806
ENSMUSG00000056076.14_140412845_140415872_1	chr5	+	280	3	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	7762	13243	7762	-13243	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTCACGGGCCATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	140412844	140415872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140412901_140413164_140413323_140415806
ENSMUSG00000056076.14_140415833_140418774_1	chr5	+	316	4	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	10750	10341	10750	-10341	internal_fragment	TRUE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAGGAGATCCGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	140415832	140418774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140415939_140416016_140416084_140416725_140416773_140418678
ENSMUSG00000056076.14_140415892_140418823_1	chr5	+	306	4	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	10809	10292	10809	-10292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCACTGGCAGAAAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	140415891	140418823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140415939_140416016_140416084_140416725_140416773_140418678
ENSMUSG00000056076.14_140416726_140422029_1	chr5	+	285	3	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	11643	7086	11643	-7086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAATGAGGGAGAAGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	140416725	140422029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140416773_140418678_140418890_140422002
ENSMUSG00000056076.14_140418825_140424131_1	chr5	+	322	4	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	13742	4984	13742	-4984	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCCGGGCTGAGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	140418824	140424131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140418890_140422002_140422076_140423039_140423163_140424070
ENSMUSG00000056076.14_140422041_140425728_1	chr5	+	298	4	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	16958	3387	16958	-3387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTACATGGCCTCCGATGT	NA	NA	NA	NA	NA	NA	NA	NA	140422040	140425728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140422076_140423039_140423163_140424070_140424150_140425667
ENSMUSG00000056076.14_140423133_140426789_1	chr5	+	297	4	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	18050	2326	18050	-2326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAACAAGGACCGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	140423132	140426789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140423163_140424070_140424150_140425667_140425807_140426740
ENSMUSG00000056076.14_140426811_140428134_1	chr5	+	303	4	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	21728	981	21728	-981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCACCGAGGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	140426810	140428134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140426867_140427491_140427570_140427878_140427988_140428074
ENSMUSG00000056076.14_140427513_140428648_1	chr5	+	303	4	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	22430	467	22430	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCGAGGCCACCCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	140427512	140428648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140427570_140427878_140427988_140428074_140428192_140428628
ENSMUSG00000056076.14_140427910_140428736_1	chr5	+	303	3	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	22827	379	22827	-379	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCCCGACACAGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	140427909	140428736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140427988_140428074_140428192_140428628
ENSMUSG00000056076.14_140427970_140428790_1	chr5	+	297	3	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	22887	325	22887	-325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGCTCTCACCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	140427969	140428790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_140427988_140428074_140428192_140428628
ENSMUSG00000056091.13_72074576_72131063_1	chr6	+	1766	7	FSM	ENSMUSG00000056091.13	ENSMUST00000069994.11	2258	7	0	492	0	89	multi-exon	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCTGTTTGGTAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	72074575	72131063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_72074767_72105247_72105372_72109035_72109148_72119123_72119468_72124052_72124240_72126002_72126162_72130414
ENSMUSG00000056091.13_72105265_72130645_1	chr6	+	981	5	FSM	ENSMUSG00000056091.13	ENST00000639119.1	1329	5	19	329	19	-329	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCACTGAGAACTCGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	72105264	72130645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_72105372_72109035_72109148_72119123_72119468_72124052_72124240_72130414
ENSMUSG00000056091.13_72105283_72131238_1	chr6	+	1715	6	ISM	ENSMUSG00000056091.13	ENSMUST00000114112.4	2439	7	30676	317	37	264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTCAGCTGAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	72105282	72131238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72105372_72109035_72109148_72119123_72119468_72124052_72124240_72126002_72126162_72130414
ENSMUSG00000056091.13_72105289_72131278_1	chr6	+	1749	6	ISM	ENSMUSG00000056091.13	ENSMUST00000114112.4	2439	7	30682	277	43	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGCCACACTTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	72105288	72131278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72105372_72109035_72109148_72119123_72119468_72124052_72124240_72126002_72126162_72130414
ENSMUSG00000056091.13_72105351_72130673_1	chr6	+	923	5	FSM	ENSMUSG00000056091.13	ENST00000639119.1	1329	5	105	301	105	-301	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACCCAGCACCGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	72105350	72130673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_72105372_72109035_72109148_72119123_72119468_72124052_72124240_72130414
ENSMUSG00000056091.13_72109036_72131372_1	chr6	+	1760	5	ISM	ENSMUSG00000056091.13	ENSMUST00000114112.4	2439	7	34429	183	3790	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTTCATTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	72109035	72131372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72109148_72119123_72119468_72124052_72124240_72126002_72126162_72130414
ENSMUSG00000056091.13_72119122_72131555_1	chr6	+	1833	4	ISM	ENSMUSG00000056091.13	ENSMUST00000114112.4	2439	7	44515	0	13876	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTGTTTGTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	72119121	72131555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72119468_72124052_72124240_72126002_72126162_72130414
ENSMUSG00000056091.13_72119219_72130900_1	chr6	+	922	3	ISM	ENSMUSG00000056091.13	ENST00000639119.1	1329	5	13973	74	13973	-74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTGGAAGGACTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	72119218	72130900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72119468_72124052_72124240_72130414
ENSMUSG00000056091.13_72119288_72130964_1	chr6	+	917	3	ISM	ENSMUSG00000056091.13	ENST00000639119.1	1329	5	14042	10	14042	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGAAACTGTACACACGT	NA	NA	NA	NA	NA	NA	NA	NA	72119287	72130964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72119468_72124052_72124240_72130414
ENSMUSG00000056116.19_36349301_36352866_1	chr17	-	1243	8	ISM	ENSMUSG00000056116.19	ENSMUST00000080015.12	1761	9	731	0	716	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTCTTAAATCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	36352866	36349300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36349669_36349876_36349947_36350068_36350116_36350233_36350267_36351116_36351222_36351369_36351646_36352340_36352578_36352759
ENSMUSG00000056116.19_36349431_36352940_1	chr17	-	1187	8	ISM	ENSMUSG00000056116.19	ENSMUST00000080015.12	1761	9	657	130	642	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGGTCCTACCCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	36352940	36349430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36349669_36349876_36349947_36350068_36350116_36350233_36350267_36351116_36351222_36351369_36351646_36352340_36352578_36352759
ENSMUSG00000056116.19_36349490_36352996_1	chr17	-	1166	7	NNC	ENSMUSG00000056116.19	novel	1761	9	NA	NA	586	-189	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTCACCTTGTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	36352996	36349489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_36349669_36349876_36349947_36350068_36350116_36351101_36351222_36351369_36351646_36352340_36352578_36352759
ENSMUSG00000056116.19_36349504_36352977_1	chr17	-	1151	8	ISM	ENSMUSG00000056116.19	ENSMUST00000080015.12	1761	9	620	203	605	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTAGTCAGGCATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	36352977	36349503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36349669_36349876_36349947_36350068_36350116_36350233_36350267_36351116_36351222_36351369_36351646_36352340_36352578_36352759
ENSMUSG00000056116.19_36349623_36353289_1	chr17	-	1131	9	FSM	ENSMUSG00000056116.19	ENSMUST00000080015.12	1761	9	308	322	293	-322	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGCCCCTTTGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	36353289	36349622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_36349669_36349876_36349947_36350068_36350116_36350233_36350267_36351116_36351222_36351369_36351646_36352340_36352578_36352759_36353021_36353233
ENSMUSG00000056116.19_36349877_36353392_1	chr17	-	1188	8	ISM	ENSMUSG00000056116.19	ENSMUST00000080015.12	1761	9	205	576	190	-576	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACCATGTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	36353392	36349876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36349947_36350068_36350116_36350233_36350267_36351116_36351222_36351369_36351646_36352340_36352578_36352759_36353021_36353233
ENSMUSG00000056116.19_36350068_36353575_1	chr17	-	1193	8	ISM	ENSMUSG00000056116.19	ENSMUST00000077960.7	1694	10	64	767	7	-767	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACATGGGGTGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	36353575	36350067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36350116_36350233_36350267_36351116_36351222_36351369_36351646_36352340_36352578_36352759_36353021_36353233_36353353_36353461
ENSMUSG00000056116.19_36352359_36353587_1	chr17	-	834	3	ISM	ENSMUSG00000056116.19	ENSMUST00000058801.15	1534	9	-5	3060	-5	-3058	intron_retention	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGCTGCTGCGTTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	36353587	36352358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36352578_36352759_36353021_36353233
ENSMUSG00000056121.17_78685315_78712186_1	chr17	-	1443	6	ISM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	13374	1	13326	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCGGAGTCTTGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78712186	78685314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156
ENSMUSG00000056121.17_78685514_78720321_1	chr17	-	1360	7	ISM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	5239	200	5191	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGCGTGTCTGGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	78720321	78685513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292
ENSMUSG00000056121.17_78685567_78720375_1	chr17	-	1361	7	ISM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	5185	253	5137	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGGGATGCCATTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	78720375	78685566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292
ENSMUSG00000056121.17_78685750_78725512_1	chr17	-	1455	8	FSM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	48	436	0	-436	multi-exon	FALSE	canonical	NA	NA	NA	NA	2056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGCATCTTCGGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	78725512	78685749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
ENSMUSG00000056121.17_78685827_78725512_1	chr17	-	1378	8	FSM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	48	513	0	-513	multi-exon	FALSE	canonical	NA	NA	NA	NA	1991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCACTGAAGAACTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	78725512	78685826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
ENSMUSG00000056121.17_78689037_78712273_1	chr17	-	670	5	ISM	ENSMUSG00000056121.17	ENST00000405912.8	1042	7	13247	0	13239	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTGTTAACCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	78712273	78689036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156
ENSMUSG00000056121.17_78689037_78725525_1	chr17	-	1124	8	ISM	ENSMUSG00000056121.17	ENSMUST00000234530.2	2001	10	-13	3723	0	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTGTTAACCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	78725525	78689036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_78689103_78692172_78692249_78694419_78694501_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
ENSMUSG00000056121.17_78692173_78720401_1	chr17	-	713	5	ISM	ENSMUSG00000056121.17	ENSMUST00000234029.2	1516	7	5111	6866	5111	-3136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGCGAAGGCAAATCTAA	NA	NA	NA	NA	NA	NA	NA	NA	78720401	78692172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292
ENSMUSG00000056121.17_78708151_78725353_1	chr17	-	637	5	ISM	ENSMUSG00000056121.17	ENSMUST00000234530.2	2001	10	159	22837	159	-19114	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAACACAAAGAGACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	78725353	78708150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
ENSMUSG00000056124.6_20820494_20878658_1	chr18	-	2050	8	FSM	ENSMUSG00000056124.6	ENST00000237019.11	2051	8	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTGTGTTTATACACGGT	NA	NA	NA	NA	NA	NA	NA	NA	20878658	20820493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20878409
ENSMUSG00000056124.6_20821248_20825569_1	chr18	-	624	4	ISM	ENSMUSG00000056124.6	ENST00000383131.3	1240	8	53033	0	53033	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTTACAGCGCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	20825569	20821247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448
ENSMUSG00000056124.6_20821369_20839496_1	chr18	-	605	5	ISM	ENSMUSG00000056124.6	ENST00000383131.3	1240	8	39106	121	39106	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCATGGTGGGGTAGACC	NA	NA	NA	NA	NA	NA	NA	NA	20839496	20821368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20839461
ENSMUSG00000056124.6_20821480_20853114_1	chr18	-	613	6	ISM	ENSMUSG00000056124.6	ENST00000383131.3	1240	8	25488	232	25488	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAACAATTTATTATACAC	NA	NA	NA	NA	NA	NA	NA	NA	20853114	20821479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20839461_20839587_20853085
ENSMUSG00000056124.6_20821990_20861050_1	chr18	-	686	6	ISM	ENSMUSG00000056124.6	ENST00000383131.3	1240	8	17552	742	17552	-742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGATGTCATCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	20861050	20821989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_20822094_20822277_20822401_20825448_20825637_20839461_20839587_20853085_20853200_20861018
ENSMUSG00000056124.6_20822357_20878429_1	chr18	-	608	6	ISM	ENSMUSG00000056124.6	ENST00000383131.3	1240	8	173	1109	173	-1109	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGCAATTCAGGAAGATC	NA	NA	NA	NA	NA	NA	NA	NA	20878429	20822356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_20822401_20825448_20825637_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ENSMUSG00000056124.6_20825480_20878515_1	chr18	-	619	5	ISM	ENSMUSG00000056124.6	ENST00000383131.3	1240	8	87	4232	87	-4232	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGCGAAGCTGGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	20878515	20825479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_20825637_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ENSMUSG00000056124.6_20825541_20878556_1	chr18	-	599	5	ISM	ENSMUSG00000056124.6	ENST00000383131.3	1240	8	46	4293	46	-4293	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATCATCTGCCTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	20878556	20825540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_20825637_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ENSMUSG00000056131.14_86436430_86439619_1	chr9	-	1265	3	ISM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	14261	0	14261	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCAGTGTGTTTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	86439619	86436429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86437457_86438244_86438419_86439555
ENSMUSG00000056131.14_86436773_86443888_1	chr9	-	1209	6	ISM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	9992	343	9992	281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGTGACCATTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	86443888	86436772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873
ENSMUSG00000056131.14_86436888_86444631_1	chr9	-	1206	7	ISM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	9249	458	9249	166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTACTGGCAGAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	86444631	86436887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588
ENSMUSG00000056131.14_86437054_86446799_1	chr9	-	1225	8	ISM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	7081	624	7081	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTTTCGATTGCTTACC	NA	NA	NA	NA	NA	NA	NA	NA	86446799	86437053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729
ENSMUSG00000056131.14_86437054_86446871_1	chr9	-	1297	8	ISM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	7009	624	7009	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTTTCGATTGCTTACC	NA	NA	NA	NA	NA	NA	NA	NA	86446871	86437053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729
ENSMUSG00000056131.14_86437309_86447784_1	chr9	-	1230	9	ISM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	6096	879	6096	-255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGGCAGTACTAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	86447784	86437308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650
ENSMUSG00000056131.14_86438239_86451299_1	chr9	-	1192	10	ISM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	2581	1809	2581	-1185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATCAATCTATTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	86451299	86438238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263
ENSMUSG00000056131.14_86438326_86451419_1	chr9	-	1225	10	ISM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	2461	1896	2461	-1272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACACTTGCCCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	86451419	86438325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263
ENSMUSG00000056131.14_86439554_86452272_1	chr9	-	1181	10	ISM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	1608	3124	1608	-2500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGAGTGTGAAACCACC	NA	NA	NA	NA	NA	NA	NA	NA	86452272	86439553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254
ENSMUSG00000056131.14_86439597_86452345_1	chr9	-	1211	10	ISM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	1535	3167	1535	-2543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTATGTCGATCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	86452345	86439596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254
ENSMUSG00000056167.9_114414946_114461051_1	chr9	-	2602	18	ISM	ENSMUSG00000056167.9	ENSMUST00000070117.8	2853	20	8091	0	8091	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATATGTTGCATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	114461051	114414945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889
ENSMUSG00000056167.9_114415138_114461844_1	chr9	-	2508	18	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	7298	-192	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGGGGCGTGGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	114461844	114415137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427738_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744
ENSMUSG00000056167.9_114415163_114469031_1	chr9	-	2525	20	FSM	ENSMUSG00000056167.9	ENSMUST00000070117.8	2853	20	111	217	111	-217	multi-exon	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGGTTTGTGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	114469031	114415162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ENSMUSG00000056167.9_114415218_114469056_1	chr9	-	2495	20	FSM	ENSMUSG00000056167.9	ENSMUST00000070117.8	2853	20	86	272	86	-272	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTGGACCCAGCACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	114469056	114415217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ENSMUSG00000056201.9_5540483_5545246_1	chr19	+	2363	4	NNC	ENSMUSG00000056201.9	novel	2354	4	NA	NA	0	17	intron_retention	FALSE	canonical	NA	NA	NA	NA	28004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCGAGGGCTTATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	5540482	5545246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_5540631_5542524_5542833_5543182_5543260_5543416
ENSMUSG00000056201.9_5540593_5544059_1	chr19	+	1074	4	FSM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	110	1170	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTTTGGGTTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	5540592	5544059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408
ENSMUSG00000056204.9_71103400_71112301_1	chr8	-	481	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	87	4315	0	-572	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGCCGCGGCCGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	71112301	71103399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
ENSMUSG00000056209.8_45736367_45737546_1	chr19	-	506	5	ISM	ENSMUSG00000056209.8	ENSMUST00000070215.8	888	6	484	194	484	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTATTGGGGTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	45737546	45736366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495
ENSMUSG00000056209.8_45736641_45738000_1	chr19	-	502	5	ISM	ENSMUSG00000056209.8	ENSMUST00000070215.8	888	6	30	468	30	-468	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCCAAGAAGCACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	45738000	45736640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_45736720_45736984_45737079_45737188_45737309_45737495_45737582_45737877
ENSMUSG00000056214.10_80090105_80161943_1	chr18	+	2236	3	FSM	ENSMUSG00000056214.10	ENSMUST00000070219.9	3147	3	0	911	0	-911	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGCGATCCGTGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	80090104	80161943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_80090358_80123039_80123263_80160183
ENSMUSG00000056214.10_80123044_80162205_1	chr18	+	2241	2	ISM	ENSMUSG00000056214.10	ENSMUST00000070219.9	3147	3	32939	649	32939	-649	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCCCTTATGGTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	80123043	80162205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_80123263_80160183
ENSMUSG00000056220.15_149705387_149747169_1	chr1	-	1657	9	ISM	ENSMUSG00000056220.15	ENSMUST00000111926.9	2835	17	51021	0	51021	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATTACCACTAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	149747169	149705386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_149705944_149716368_149716527_149717914_149718111_149727017_149727203_149733195_149733436_149736805_149736878_149740661_149740755_149740866_149741005_149747151
ENSMUSG00000056220.15_149705387_149747208_1	chr1	-	1696	9	ISM	ENSMUSG00000056220.15	ENSMUST00000111926.9	2835	17	50982	0	50982	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATTACCACTAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	149747208	149705386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_149705944_149716368_149716527_149717914_149718111_149727017_149727203_149733195_149733436_149736805_149736878_149740661_149740755_149740866_149741005_149747151
ENSMUSG00000056220.15_149705560_149748346_1	chr1	-	1639	10	ISM	ENSMUSG00000056220.15	ENSMUST00000111926.9	2835	17	49844	173	49844	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAAATATGACATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	149748346	149705559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_149705944_149716368_149716527_149717914_149718111_149727017_149727203_149733195_149733436_149736805_149736878_149740661_149740755_149740866_149741005_149747151_149747267_149748288
ENSMUSG00000056220.15_149705633_149748406_1	chr1	-	1626	10	ISM	ENSMUSG00000056220.15	ENSMUST00000111926.9	2835	17	49784	246	49784	-246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTTTTGACATTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	149748406	149705632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_149705944_149716368_149716527_149717914_149718111_149727017_149727203_149733195_149733436_149736805_149736878_149740661_149740755_149740866_149741005_149747151_149747267_149748288
ENSMUSG00000056220.15_149705806_149755803_1	chr1	-	1621	11	ISM	ENSMUSG00000056220.15	ENSMUST00000111926.9	2835	17	42387	419	42387	-419	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGATGATCAAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	149755803	149705805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_149705944_149716368_149716527_149717914_149718111_149727017_149727203_149733195_149733436_149736805_149736878_149740661_149740755_149740866_149741005_149747151_149747267_149748288_149748512_149755740
ENSMUSG00000056220.15_149716365_149762039_1	chr1	-	1703	11	ISM	ENSMUSG00000056220.15	ENSMUST00000111926.9	2835	17	36151	10978	36151	-10978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCTACCACAGCAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	149762039	149716364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_149716527_149717914_149718111_149727017_149727203_149733195_149733436_149736805_149736878_149740661_149740755_149740866_149741005_149747151_149747267_149748288_149748512_149755740_149755878_149761897
ENSMUSG00000056220.15_149718086_149778144_1	chr1	-	1622	13	ISM	ENSMUSG00000056220.15	ENSMUST00000111926.9	2835	17	20046	12699	20046	-12699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAAATGAACAAGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	149778144	149718085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_149718111_149727017_149727203_149733195_149733436_149736805_149736878_149740661_149740755_149740866_149741005_149747151_149747267_149748288_149748512_149755740_149755878_149761897_149762040_149763357_149763396_149776850_149776965_149778044
ENSMUSG00000056220.15_149727017_149797887_1	chr1	-	1729	13	ISM	ENSMUSG00000056220.15	ENSMUST00000111926.9	2835	17	303	21630	303	-21630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAGGACAATGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	149797887	149727016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_149727203_149733195_149733436_149736805_149736878_149740661_149740755_149740866_149741005_149747151_149747267_149748288_149748512_149755740_149755878_149761897_149762040_149763357_149763396_149776850_149776965_149778044_149778194_149797805
ENSMUSG00000056220.15_149733196_149837009_1	chr1	-	1710	14	ISM	ENSMUSG00000056220.15	ENSMUST00000070200.15	2856	18	32	27827	32	-27809	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTAAGCCGTCTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	149837009	149733195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_149733436_149736805_149736878_149740661_149740755_149740866_149741005_149747151_149747267_149748288_149748512_149755740_149755878_149761897_149762040_149763357_149763396_149776850_149776965_149778044_149778194_149797805_149797888_149808408_149808508_149836941
ENSMUSG00000056228.11_11563977_11600783_1	chr8	-	1897	15	NNC	ENSMUSG00000056228.11	novel	1902	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGGAAGATTAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	11600783	11563976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_11564187_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294_11580428_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
ENSMUSG00000056228.11_11563977_11600783_2	chr8	-	1896	15	NNC	ENSMUSG00000056228.11	novel	1902	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGGAAGATTAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	11600783	11563976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_11564192_11564498_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294_11580428_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
ENSMUSG00000056234.16_31881895_31898446_1	chr14	+	1352	8	ISM	ENSMUSG00000056234.16	ENSMUST00000163336.8	4065	10	73	3366	73	-2758	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTGCAGAGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	31881894	31898446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895
ENSMUSG00000056234.16_31892702_31898571_1	chr14	+	1407	7	ISM	ENSMUSG00000056234.16	ENSMUST00000111994.10	3343	10	4954	2633	4954	-2633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGAGTCCCTGACACTG	NA	NA	NA	NA	NA	NA	NA	NA	31892701	31898571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895
ENSMUSG00000056234.16_31892815_31898619_1	chr14	+	1342	7	ISM	ENSMUSG00000056234.16	ENSMUST00000111994.10	3343	10	5067	2585	5067	-2585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAACAAGCTAAGGCACCC	NA	NA	NA	NA	NA	NA	NA	NA	31892814	31898619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895
ENSMUSG00000056234.16_31894361_31898766_1	chr14	+	1343	6	ISM	ENSMUSG00000056234.16	ENSMUST00000111994.10	3343	10	6613	2438	6613	-2438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCAAAGAGATGCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	31894360	31898766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895
ENSMUSG00000056234.16_31894912_31899238_1	chr14	+	1343	5	ISM	ENSMUSG00000056234.16	ENSMUST00000111994.10	3343	10	7164	1966	7164	-1966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTACGGCCTCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	31894911	31899238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189
ENSMUSG00000056234.16_31896393_31899885_1	chr14	+	1362	4	ISM	ENSMUSG00000056234.16	ENSMUST00000111994.10	3343	10	8645	1319	8645	-1319	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTCAGCTTAGTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	31896392	31899885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_31896491_31897895_31898913_31899189_31899331_31899779
ENSMUSG00000056234.16_31898466_31900529_1	chr14	+	1338	3	ISM	ENSMUSG00000056234.16	ENSMUST00000111994.10	3343	10	10718	675	10718	-675	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATGCAGTACCCGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	31898465	31900529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_31898913_31899189_31899331_31899779
ENSMUSG00000056258.10_65867235_65874101_1	chr15	-	762	4	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	29218	492	29218	-492	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCCAAGTGGCTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	65874101	65867234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_65867755_65869549_65869635_65871865_65871965_65874043
ENSMUSG00000056258.10_65867417_65876664_1	chr15	-	748	5	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	26655	674	26655	-674	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGAGGCCCACAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	65876664	65867416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_65867755_65869549_65869635_65871865_65871965_65874043_65874176_65876570
ENSMUSG00000056258.10_65867708_65892168_1	chr15	-	731	7	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	11151	965	11151	-965	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCATATGGAACGCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	65892168	65867707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_65867755_65869549_65869635_65871865_65871965_65874043_65874176_65876570_65876674_65877620_65877824_65892106
ENSMUSG00000056258.10_65871925_65895543_1	chr15	-	746	7	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	7776	5182	7776	-5182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATAAGAAGTCTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	65895543	65871924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_65871965_65874043_65874176_65876570_65876674_65877620_65877824_65892106_65892231_65893589_65893686_65895495
ENSMUSG00000056258.10_65874109_65896991_1	chr15	-	733	7	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	6328	7366	6328	-7366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGAGCAGTATTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	65896991	65874108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_65874176_65876570_65876674_65877620_65877824_65892106_65892231_65893589_65893686_65895495_65895607_65896962
ENSMUSG00000056258.10_65876571_65897118_1	chr15	-	793	6	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	6201	9828	6201	-9828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGACCCTTCTCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	65897118	65876570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_65876674_65877620_65877824_65892106_65892231_65893589_65893686_65895495_65895607_65896962
ENSMUSG00000056258.10_65877622_65900546_1	chr15	-	762	6	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	2773	10879	2773	-10879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATGCCCTTCTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	65900546	65877621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_65877824_65892106_65892231_65893589_65893686_65895495_65895607_65896962_65897119_65900473
ENSMUSG00000056258.10_65877701_65900584_1	chr15	-	721	6	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	2735	10958	2735	-10958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGTTGGCTTAAACAATA	NA	NA	NA	NA	NA	NA	NA	NA	65900584	65877700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_65877824_65892106_65892231_65893589_65893686_65895495_65895607_65896962_65897119_65900473
ENSMUSG00000056258.10_65892189_65903253_1	chr15	-	730	7	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	66	25446	66	-25446	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGGCAACCTGGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	65903253	65892188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_65892231_65893589_65893686_65895495_65895607_65896962_65897119_65900473_65900647_65902367_65902495_65903228
ENSMUSG00000056260.16_106629283_106643432_1	chr3	+	1134	3	FSM	ENSMUSG00000056260.16	ENSMUST00000106736.3	1669	3	74	461	31	212	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAGTTTCTCATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	106629282	106643432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_106629423_106641673_106641956_106642720
ENSMUSG00000056260.16_106629283_106643486_1	chr3	+	1188	3	FSM	ENSMUSG00000056260.16	ENSMUST00000106736.3	1669	3	74	407	31	266	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTACCTGCAAGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	106629282	106643486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_106629423_106641673_106641956_106642720
ENSMUSG00000056260.16_106629283_106643565_1	chr3	+	1267	3	FSM	ENSMUSG00000056260.16	ENSMUST00000106736.3	1669	3	74	328	31	-325	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAAAGGGTTGAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	106629282	106643565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_106629423_106641673_106641956_106642720
ENSMUSG00000056260.16_106641806_106643715_1	chr3	+	1145	2	ISM	ENSMUSG00000056260.16	ENSMUST00000098750.5	3103	4	12554	175	12554	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCCTCAGGTCTTACCC	NA	NA	NA	NA	NA	NA	NA	NA	106641805	106643715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_106641956_106642720
ENSMUSG00000056268.16_138969707_138990628_1	chr1	+	370	6	ISM	ENSMUSG00000056268.16	ENSMUST00000200533.5	1853	10	78534	828	74249	-828	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCAACAACATGCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	138969706	138990628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_138969782_138981083_138981154_138982278_138982360_138986804_138986865_138988012_138988067_138990598
ENSMUSG00000056268.16_138982282_139008986_1	chr1	+	379	5	ISM	ENSMUSG00000056268.16	ENST00000620048.6	3038	22	88375	89747	86824	17530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACACCTGCTGGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	138982281	139008986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_138982360_138986804_138986865_138988012_138988067_138990598_138990710_139008910
ENSMUSG00000056268.16_138988017_139018256_1	chr1	+	373	5	ISM	ENSMUSG00000056268.16	ENST00000620048.6	3038	22	94110	80477	92559	26800	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATTTAATGACTTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	138988016	139018256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191
ENSMUSG00000056268.16_139018229_139061485_1	chr1	+	370	4	ISM	ENSMUSG00000056268.16	ENST00000620048.6	3038	22	124322	37248	122771	-37248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTCTGTGGAGGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	139018228	139061485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_139018294_139029705_139029832_139038121_139038224_139061408
ENSMUSG00000056268.16_139029727_139068219_1	chr1	+	369	5	ISM	ENSMUSG00000056268.16	ENST00000620048.6	3038	22	135820	30514	134269	-30514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAAGCAACTCCCGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	139029726	139068219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189
ENSMUSG00000056305.5_72295661_72302720_1	chr6	-	877	4	ISM	ENSMUSG00000056305.5	ENST00000450066.6	1493	11	17242	-387	17242	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTGTGGGTGGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	72302720	72295660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628
ENSMUSG00000056305.5_72295793_72302735_1	chr6	-	760	4	ISM	ENSMUSG00000056305.5	ENST00000450066.6	1493	11	17227	-255	17227	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACGTGTGCGATGGATT	NA	NA	NA	NA	NA	NA	NA	NA	72302735	72295792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628
ENSMUSG00000056305.5_72295857_72302771_1	chr6	-	732	4	ISM	ENSMUSG00000056305.5	ENST00000450066.6	1493	11	17191	-191	17191	191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGAAGTCAGCAGCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	72302771	72295856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628
ENSMUSG00000056305.5_72296048_72306500_1	chr6	-	662	5	ISM	ENSMUSG00000056305.5	ENST00000409766.7	1687	12	15633	0	13462	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCACCATGAAGGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	72306500	72296047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72296223_72296722_72296810_72302628_72302772_72305500_72305690_72306432
ENSMUSG00000056305.5_72296048_72310170_1	chr6	-	876	7	ISM	ENSMUSG00000056305.5	ENST00000450066.6	1493	11	9792	0	9792	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCACCATGAAGGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	72310170	72296047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092
ENSMUSG00000056305.5_72296151_72313309_1	chr6	-	840	8	ISM	ENSMUSG00000056305.5	ENST00000450066.6	1493	11	6653	103	6653	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	923	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCTGTGGCTGAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	72313309	72296150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242
ENSMUSG00000056305.5_72296188_72310146_1	chr6	-	576	6	ISM	ENSMUSG00000056305.5	ENST00000409766.7	1687	12	11987	140	9816	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGGGCTTGAACGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	72310146	72296187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72296223_72296722_72296810_72302628_72302772_72305500_72305690_72306432_72306501_72310092
ENSMUSG00000056305.5_72298283_72314760_1	chr6	-	872	7	ISM	ENSMUSG00000056305.5	ENST00000450066.6	1493	11	5202	2235	5202	-2235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCCCTCTGAGGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	72314760	72298282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684
ENSMUSG00000056305.5_72302644_72315399_1	chr6	-	866	7	ISM	ENSMUSG00000056305.5	ENST00000450066.6	1493	11	4563	6596	4563	-6596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1059	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTCCCTATCACGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	72315399	72302643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375
ENSMUSG00000056305.5_72302705_72315439_1	chr6	-	845	7	ISM	ENSMUSG00000056305.5	ENST00000450066.6	1493	11	4523	6657	4523	-6657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	972	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGCATCAAGAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	72315439	72302704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375
ENSMUSG00000056305.5_72302757_72315494_1	chr6	-	848	7	ISM	ENSMUSG00000056305.5	ENST00000450066.6	1493	11	4468	6709	4468	-6709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	887	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGAACTTCCTGAAACG	NA	NA	NA	NA	NA	NA	NA	NA	72315494	72302756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375
ENSMUSG00000056305.5_72305500_72319953_1	chr6	-	944	7	ISM	ENSMUSG00000056305.5	ENST00000450066.6	1493	11	9	9452	9	-9452	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	963	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCAGGTCACCACCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	72319953	72305499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315533_72319881
ENSMUSG00000056305.5_72305643_72317002_1	chr6	-	762	7	ISM	ENSMUSG00000056305.5	ENST00000409766.7	1687	12	5131	9595	2960	-9595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGATGGTAGAGTCCACGT	NA	NA	NA	NA	NA	NA	NA	NA	72317002	72305642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949
ENSMUSG00000056305.5_72306433_72319951_1	chr6	-	827	7	ISM	ENSMUSG00000056305.5	ENST00000409766.7	1687	12	2182	10385	11	-10385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATCCAGAACAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	72319951	72306432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881
ENSMUSG00000056305.5_72310151_72321929_1	chr6	-	763	7	ISM	ENSMUSG00000056305.5	ENST00000409766.7	1687	12	204	14103	204	-14103	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTCTGAATGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	72321929	72310150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ENSMUSG00000056305.5_72313368_72321986_1	chr6	-	675	6	ISM	ENSMUSG00000056305.5	ENST00000409766.7	1687	12	147	17320	147	-17320	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTTTGGAGAGCTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	72321986	72313367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ENSMUSG00000056310.15_130285876_130306790_1	chr5	+	1123	8	ISM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	0	63614	0	200	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGGGAAAGCTGCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	130285875	130306790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773
ENSMUSG00000056310.15_130285876_130306847_1	chr5	+	1180	8	ISM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	0	63557	0	257	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATGATAACACCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	130285875	130306847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773
ENSMUSG00000056310.15_130295822_130317746_1	chr5	+	993	7	ISM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	0	51952	0	3519	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGATCTTGAAGGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	130295821	130317746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130295926_130296735_130296935_130298011_130298289_130303461_130303585_130306773_130306892_130316083_130316203_130317693
ENSMUSG00000056310.15_130295874_130325506_1	chr5	+	1094	9	ISM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	9998	44898	52	-3364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCAAGCACTGTGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	130295873	130325506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464
ENSMUSG00000056310.15_130296734_130325481_1	chr5	+	965	7	ISM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	912	44217	912	-3389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGAGCGCTTTGAAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	130296733	130325481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130296935_130298011_130298289_130303461_130303585_130306773_130306892_130316083_130316203_130317693_130317804_130325464
ENSMUSG00000056310.15_130296772_130325558_1	chr5	+	1005	7	NIC	ENSMUSG00000056310.15	novel	3044	16	NA	NA	950	-3312	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAACAGGCTTTTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	130296771	130325558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_+_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130316083_130316203_130317693_130317804_130325464
ENSMUSG00000056310.15_130296779_130325540_1	chr5	+	979	7	ISM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	957	44158	957	-3330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCGATCATGTACCCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	130296778	130325540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130296935_130298011_130298289_130303461_130303585_130306773_130306892_130316083_130316203_130317693_130317804_130325464
ENSMUSG00000056310.15_130296842_130325607_1	chr5	+	983	7	ISM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	1020	44091	1020	-3263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCACCAATGCGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	130296841	130325607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130296935_130298011_130298289_130303461_130303585_130306773_130306892_130316083_130316203_130317693_130317804_130325464
ENSMUSG00000056310.15_130296879_130328779_1	chr5	+	1016	8	ISM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	1057	40919	1057	-91	internal_fragment	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACGCCAGCACCAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	130296878	130328779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130296935_130298011_130298289_130303461_130303585_130306773_130306892_130316083_130316203_130317693_130317804_130325464_130325643_130328744
ENSMUSG00000056310.15_130298011_130328784_1	chr5	+	966	7	ISM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	2189	40914	2189	-86	internal_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGCACCAGAGACGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	130298010	130328784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130298289_130303461_130303585_130306773_130306892_130316083_130316203_130317693_130317804_130325464_130325643_130328744
ENSMUSG00000056310.15_130298213_130364142_1	chr5	+	1080	10	ISM	ENSMUSG00000056310.15	ENST00000359626.10	1978	14	6475	5556	2391	-5556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCACGAGGAAGTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	130298212	130364142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086
ENSMUSG00000056310.15_130298234_130364106_1	chr5	+	970	9	ISM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	2412	5592	2412	-5592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCAGCCAGCAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	130298233	130364106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130298289_130303461_130303585_130306773_130306892_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086
ENSMUSG00000056310.15_130303460_130317746_1	chr5	+	468	5	ISM	ENSMUSG00000056310.15	ENST00000359626.10	1978	14	11722	51952	7638	3519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGATCTTGAAGGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	130303459	130317746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693
ENSMUSG00000056310.15_130303460_130364254_1	chr5	+	1065	8	ISM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	7638	5444	7638	-5444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGATGTGTGCTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	130303459	130364254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130303585_130306773_130306892_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086
ENSMUSG00000056310.15_130306770_130369477_1	chr5	+	962	8	ISM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	10948	221	10948	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGGACATGGATCAATTA	NA	NA	NA	NA	NA	NA	NA	NA	130306769	130369477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130306892_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ENSMUSG00000056310.15_130306808_130325559_1	chr5	+	461	5	ISM	ENSMUSG00000056310.15	ENST00000359626.10	1978	14	15070	44139	10986	-3311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAACAGGCTTTTGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	130306807	130325559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464
ENSMUSG00000056310.15_130306814_130369537_1	chr5	+	978	8	ISM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	10992	161	10992	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCTCCAAGACGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	130306813	130369537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130306892_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ENSMUSG00000056310.15_130306871_130369582_1	chr5	+	966	8	ISM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	11049	116	11049	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGGGCACTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	130306870	130369582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130306892_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ENSMUSG00000056310.15_130316082_130369699_1	chr5	+	1064	7	ISM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	20260	-1	20260	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCCAAAGACAAAAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	130316081	130369699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ENSMUSG00000056310.15_130325535_130370011_1	chr5	+	1075	5	ISM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	29713	-313	29713	313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTACCTTCCTCTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	130325534	130370011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ENSMUSG00000056310.15_130328794_130370193_1	chr5	+	1100	4	ISM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	32972	-495	32972	-211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCCTGGGCTAAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	130328793	130370193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130328881_130354439_130354551_130364086_130364255_130369459
ENSMUSG00000056310.15_130364135_130370404_1	chr5	+	1065	2	ISM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	68313	-706	68313	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGACATGTTCCCATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	130364134	130370404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130364255_130369459
ENSMUSG00000056328.15_67092771_67095228_1	chr11	+	524	5	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	1541	20171	1541	-20093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAACAATTGCAGTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	67092770	67095228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67092912_67092999_67093144_67093258_67093416_67094401_67094430_67095174
ENSMUSG00000056328.15_67092853_67095284_1	chr11	+	498	5	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	1623	20115	1623	-20037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGTAAGCTGACTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	67092852	67095284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67092912_67092999_67093144_67093258_67093416_67094401_67094430_67095174
ENSMUSG00000056328.15_67093030_67095486_1	chr11	+	512	5	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	1800	19913	1800	-19835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGGTCTTCTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	67093029	67095486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67093144_67093258_67093416_67094401_67094430_67095174_67095290_67095388
ENSMUSG00000056328.15_67093340_67096577_1	chr11	+	538	7	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	2110	18822	2110	-18744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCAGCATTGATGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	67093339	67096577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67093416_67094401_67094430_67095174_67095290_67095388_67095482_67095593_67095658_67096327_67096427_67096514
ENSMUSG00000056328.15_67095429_67097157_1	chr11	+	521	6	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	4199	18242	4199	-18164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCCAGGGTCAAGGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	67095428	67097157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67095482_67095593_67095658_67096327_67096427_67096514_67096619_67096738_67096878_67097095
ENSMUSG00000056328.15_67096350_67097361_1	chr11	+	498	5	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	5120	18038	5120	-17960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCACCCGCATCAACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	67096349	67097361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67096427_67096514_67096619_67096738_67096878_67097095_67097215_67097302
ENSMUSG00000056328.15_67096561_67098315_1	chr11	+	536	5	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	5331	17084	5331	-17006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCGTGCTGGAGCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	67096560	67098315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67096619_67096738_67096878_67097095_67097215_67097302_67097453_67098245
ENSMUSG00000056328.15_67096848_67099732_1	chr11	+	524	5	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	5618	15667	5618	-15589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACCTCCTTCAAGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	67096847	67099732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67096878_67097095_67097215_67097302_67097453_67098245_67098417_67099678
ENSMUSG00000056328.15_67097176_67099855_1	chr11	+	537	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	5946	15544	5946	-15466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGACTACAACATCGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	67097175	67099855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67097215_67097302_67097453_67098245_67098417_67099678
ENSMUSG00000056328.15_67097390_67099961_1	chr11	+	517	3	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	6160	15438	6160	-15360	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGGGCAGCAGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	67097389	67099961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67097453_67098245_67098417_67099678
ENSMUSG00000056328.15_67098334_67101244_1	chr11	+	515	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	7104	14155	7104	-14077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACTTTGTACGGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	67098333	67101244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67098417_67099678_67099992_67100082_67100160_67101202
ENSMUSG00000056328.15_67099793_67101751_1	chr11	+	516	5	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	8563	13648	8563	-13570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGTTCATCGATAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	67099792	67101751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67099992_67100082_67100160_67101202_67101291_67101374_67101493_67101717
ENSMUSG00000056328.15_67099925_67101971_1	chr11	+	517	6	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	8695	13428	8695	-13350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGACAAGTTGGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	67099924	67101971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67099992_67100082_67100160_67101202_67101291_67101374_67101493_67101717_67101842_67101928
ENSMUSG00000056328.15_67101228_67102235_1	chr11	+	523	5	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	9998	13164	9998	-13086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAACCTCTCTTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	67101227	67102235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67101291_67101374_67101493_67101717_67101842_67101928_67102066_67102154
ENSMUSG00000056328.15_67101928_67104164_1	chr11	+	524	3	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	10698	11235	10698	-11157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGCCAAGAAGAGGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	67101927	67104164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67102066_67102154_67102411_67104034
ENSMUSG00000056328.15_67101981_67104216_1	chr11	+	523	3	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	10751	11183	10751	-11105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGACCTTGAGCTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	67101980	67104216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67102066_67102154_67102411_67104034
ENSMUSG00000056328.15_67102218_67104434_1	chr11	+	482	3	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	10988	10965	10988	-10887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGCTGACCAAGGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	67102217	67104434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67102411_67104034_67104278_67104388
ENSMUSG00000056328.15_67102358_67105371_1	chr11	+	513	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	11128	10028	11128	-9950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTGAAAGAGCCAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	67102357	67105371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67102411_67104034_67104278_67104388_67104566_67105331
ENSMUSG00000056328.15_67104224_67105810_1	chr11	+	535	5	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	12994	9589	12994	-9511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCTCTGACCTCTCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	67104223	67105810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67104278_67104388_67104566_67105331_67105478_67105562_67105654_67105743
ENSMUSG00000056328.15_67104500_67105976_1	chr11	+	536	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	13270	9423	13270	-9345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCTGAGGAAGAAGCACG	NA	NA	NA	NA	NA	NA	NA	NA	67104499	67105976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67104566_67105331_67105478_67105562_67105654_67105743
ENSMUSG00000056328.15_67105587_67106722_1	chr11	+	513	3	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	14357	8677	14357	-8599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGAGGAGGAACAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	67105586	67106722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67105654_67105743_67106134_67106666
ENSMUSG00000056328.15_67105766_67108330_1	chr11	+	536	3	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	14536	7069	14536	-6991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCTCTCCAGGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	67105765	67108330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67106134_67106666_67106794_67108289
ENSMUSG00000056328.15_67105872_67108611_1	chr11	+	541	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	14642	6788	14642	-6710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGCCATGACTGTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	67105871	67108611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67106134_67106666_67106794_67108289_67108409_67108578
ENSMUSG00000056328.15_67105949_67108660_1	chr11	+	513	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	14719	6739	14719	-6661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAAGGCTGAGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	67105948	67108660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67106134_67106666_67106794_67108289_67108409_67108578
ENSMUSG00000056328.15_67106018_67108728_1	chr11	+	512	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	14788	6671	14788	-6593	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGACGGATGCCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	67106017	67108728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67106134_67106666_67106794_67108289_67108409_67108578
ENSMUSG00000056328.15_67106702_67110111_1	chr11	+	516	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	15472	5288	15472	-5210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTCATGATTGATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	67106701	67110111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67106794_67108289_67108409_67108578_67108776_67110003
ENSMUSG00000056328.15_67106765_67110175_1	chr11	+	517	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	15535	5224	15535	-5146	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGACAAGGTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	67106764	67110175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67106794_67108289_67108409_67108578_67108776_67110003
ENSMUSG00000056328.15_67108322_67110535_1	chr11	+	539	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	17092	4864	17092	-4786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTCAGCACAGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	67108321	67110535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67108409_67108578_67108776_67110003_67110188_67110464
ENSMUSG00000056328.15_67108388_67110573_1	chr11	+	511	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	17158	4826	17158	-4748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGGAATCTTTAGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	67108387	67110573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67108409_67108578_67108776_67110003_67110188_67110464
ENSMUSG00000056328.15_67108668_67110784_1	chr11	+	523	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	17438	4615	17438	-4537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGAAGCAAATTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	67108667	67110784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67108776_67110003_67110188_67110464_67110631_67110719
ENSMUSG00000056328.15_67110017_67111273_1	chr11	+	508	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	18787	4126	18787	-4048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAACCAAGTCAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	67110016	67111273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67110188_67110464_67110631_67110719_67110845_67111227
ENSMUSG00000056328.15_67110071_67111326_1	chr11	+	507	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	18841	4073	18841	-3995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATCGACCAGCTGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	67110070	67111326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67110188_67110464_67110631_67110719_67110845_67111227
ENSMUSG00000056328.15_67110120_67111406_1	chr11	+	538	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	18890	3993	18890	-3915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACGCCATCAGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	67110119	67111406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67110188_67110464_67110631_67110719_67110845_67111227
ENSMUSG00000056328.15_67110571_67111536_1	chr11	+	494	3	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	19341	3863	19341	-3785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTGGCACCAAGAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	67110570	67111536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67110631_67110719_67110845_67111227
ENSMUSG00000056328.15_67110720_67111702_1	chr11	+	516	3	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	19490	3697	19490	-3619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCTGCAGGCTGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	67110719	67111702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67110845_67111227_67111537_67111620
ENSMUSG00000056328.15_67110778_67111757_1	chr11	+	513	3	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	19548	3642	19548	-3564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGGAAGATTGCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	67110777	67111757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67110845_67111227_67111537_67111620
ENSMUSG00000056328.15_67111251_67112164_1	chr11	+	529	3	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	20021	3235	20021	-3157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTCCCAAATCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	67111250	67112164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67111537_67111620_67111825_67112125
ENSMUSG00000056328.15_67111516_67112490_1	chr11	+	503	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	20286	2909	20286	-2831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAACTGGAGGCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	67111515	67112490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67111537_67111620_67111825_67112125_67112252_67112338
ENSMUSG00000056328.15_67111764_67113248_1	chr11	+	515	5	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	20534	2151	20534	-2073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATCAAAGGTCAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	67111763	67113248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67111825_67112125_67112252_67112338_67112510_67112972_67113078_67113196
ENSMUSG00000056328.15_67112173_67115202_1	chr11	+	511	5	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	20943	197	20943	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGGAGCGGGCTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	67112172	67115202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67112252_67112338_67112510_67112972_67113078_67113196_67113293_67115142
ENSMUSG00000056328.15_67112416_67115351_1	chr11	+	504	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	21186	48	21186	30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTGTTTTGTACTCATA	NA	NA	NA	NA	NA	NA	NA	NA	67112415	67115351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67112510_67112972_67113078_67113196_67113293_67115142
ENSMUSG00000056328.15_67112479_67115401_1	chr11	+	491	4	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	21249	-2	21249	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCGTCAGTCTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	67112478	67115401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_67112510_67112972_67113078_67113196_67113293_67115142
ENSMUSG00000056394.21_13014088_13032707_1	chr7	+	1413	14	ISM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	897	12643	897	-12643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCTGCTCTTGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	13014087	13032707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662
ENSMUSG00000056394.21_13019230_13034246_1	chr7	+	1422	14	ISM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	6039	11104	6039	-11104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGAGCACTGCAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	13019229	13034246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187
ENSMUSG00000056394.21_13020519_13034945_1	chr7	+	1414	14	ISM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	7328	10405	7328	-10405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATACGATGGGCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	13020518	13034945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856
ENSMUSG00000056394.21_13022634_13037134_1	chr7	+	1426	15	ISM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	9443	8216	9443	-8216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCTGGACACTGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	13022633	13037134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109
ENSMUSG00000056394.21_13025180_13039936_1	chr7	+	1464	15	ISM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	11989	5414	11989	-5414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACCGAGCAGATTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	13025179	13039936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835
ENSMUSG00000056394.21_13026066_13040178_1	chr7	+	1413	14	ISM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	12875	5172	12875	-5172	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTTATGAGATTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	13026065	13040178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137
ENSMUSG00000056394.21_13026420_13041515_1	chr7	+	1412	14	ISM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	13229	3835	13229	-3835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGCGGGCTGGCCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	13026419	13041515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443
ENSMUSG00000056394.21_13029396_13042424_1	chr7	+	1412	14	ISM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	16205	2926	16205	-2926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAACACCACCAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	13029395	13042424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395
ENSMUSG00000056394.21_13030152_13043181_1	chr7	+	1498	14	ISM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	16961	2169	16961	-2169	internal_fragment	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTCTGGGGTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	13030151	13043181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037
ENSMUSG00000056394.21_13030261_13044963_1	chr7	+	1419	15	ISM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	17070	387	17070	-387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCGGTTCATTCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	13030260	13044963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933
ENSMUSG00000056394.21_13032679_13045290_1	chr7	+	1499	14	ISM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	19488	60	19488	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGATCCTGGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	13032678	13045290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ENSMUSG00000056413.17_139258807_139259568_1	chr5	-	333	3	ISM	ENSMUSG00000056413.17	ENST00000649206.1	1226	11	51657	0	51657	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGAAGAAAGCCCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	139259568	139258806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_139258832_139259089_139259319_139259489
ENSMUSG00000056413.17_139259265_139265311_1	chr5	-	321	5	ISM	ENSMUSG00000056413.17	ENSMUST00000110865.2	2557	11	46066	1634	45914	-458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGAGGGCCTCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	139265311	139259264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263
ENSMUSG00000056413.17_139265382_139293564_1	chr5	-	385	5	ISM	ENSMUSG00000056413.17	ENST00000649206.1	1226	11	17661	6575	17661	-6575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCACCTGAATGCGACCT	NA	NA	NA	NA	NA	NA	NA	NA	139293564	139265381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496
ENSMUSG00000056413.17_139278944_139311090_1	chr5	-	308	4	ISM	ENSMUSG00000056413.17	ENST00000649206.1	1226	11	135	20137	135	-20137	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGAGAGGCAAGAATTCG	NA	NA	NA	NA	NA	NA	NA	NA	139311090	139278943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_139278974_139288058_139288151_139293496_139293628_139311035
ENSMUSG00000056413.17_139288133_139311223_1	chr5	-	337	3	ISM	ENSMUSG00000056413.17	ENST00000649206.1	1226	11	2	29326	2	-29326	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAGGCTGCCAGAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	139311223	139288132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_139288151_139293496_139293628_139311035
ENSMUSG00000056429.5_72586170_72592642_1	chr6	-	3144	3	ISM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	1341	755	1341	-755	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTAGGGATGCACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	72592642	72586169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72589094_72591054_72591139_72592506
ENSMUSG00000056429.5_72587026_72593725_1	chr6	-	3144	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	258	1611	258	-1611	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGGTTGCTCTATGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	72593725	72587025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
ENSMUSG00000056429.5_72587176_72593871_1	chr6	-	3140	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	112	1761	112	-1761	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGGAAACATTGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	72593871	72587175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
ENSMUSG00000056429.5_72587215_72593983_1	chr6	-	3213	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	0	1800	0	-1800	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGCTAATTTTTAGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	72593983	72587214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
ENSMUSG00000056457.7_12805705_12814968_1	chr13	-	851	5	NNC	ENSMUSG00000056457.7	novel	857	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAATGGAGAATTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	12814968	12805704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_12805991_12806880_12807064_12808176_12808285_12811719_12811896_12814870
ENSMUSG00000056457.7_12805705_12814968_2	chr13	-	850	5	NNC	ENSMUSG00000056457.7	novel	857	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAATGGAGAATTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	12814968	12805704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_12805997_12806880_12807057_12808176_12808285_12811719_12811896_12814870
ENSMUSG00000056458.17_110777048_110778232_1	chr12	-	148	2	FSM	ENSMUSG00000056458.17	ENST00000523231.5	229	2	81	0	81	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAGAGGTAGGATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	110778232	110777047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_110777176_110778212
ENSMUSG00000056459.15_76358269_76417538_1	chr12	-	1165	3	FSM	ENSMUSG00000056459.15	ENST00000555220.5	1373	3	211	-3	211	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCTTCCCATCGCACT	NA	NA	NA	NA	NA	NA	NA	NA	76417538	76358268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_76358773_76402662_76402843_76417057
ENSMUSG00000056459.15_76358269_76417639_1	chr12	-	1266	3	FSM	ENSMUSG00000056459.15	ENST00000555220.5	1373	3	110	-3	110	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCTTCCCATCGCACT	NA	NA	NA	NA	NA	NA	NA	NA	76417639	76358268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_76358773_76402662_76402843_76417057
ENSMUSG00000056459.15_76358302_76417710_1	chr12	-	1304	3	FSM	ENSMUSG00000056459.15	ENST00000555220.5	1373	3	39	30	39	-30	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACTGGGAATCAGTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	76417710	76358301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_76358773_76402662_76402843_76417057
ENSMUSG00000056459.15_76358578_76402699_2	chr12	-	315	3	FSM	ENSMUSG00000056459.15	ENST00000555424.1	451	3	136	0	136	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGGAGGGCTTCACGTT	NA	NA	NA	NA	NA	NA	NA	NA	76402699	76358577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_76358773_76396091_76396175_76402662
ENSMUSG00000056459.15_76358686_76402699_2	chr12	-	207	3	FSM	ENSMUSG00000056459.15	ENST00000555424.1	451	3	136	108	136	-108	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCCCTGGCCCCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	76402699	76358685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_76358773_76396091_76396175_76402662
ENSMUSG00000056459.15_76396213_76402711_1	chr12	-	884	2	ISM	ENSMUSG00000056459.15	ENSMUST00000176102.8	2707	3	1203	1657	124	-494	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCAGTAGAATTAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	76402711	76396212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_76397048_76402662
ENSMUSG00000056486.19_73443232_73510179_1	chr2	-	1103	7	NNC	ENSMUSG00000056486.19	novel	1411	11	NA	NA	-19429	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCTATAGCACCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	73510179	73443231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_73443541_73445005_73445112_73448264_73448395_73454458_73454537_73455220_73455395_73462089_73462175_73509958
ENSMUSG00000056486.19_73443232_73510179_2	chr2	-	1105	7	NNC	ENSMUSG00000056486.19	novel	1411	11	NA	NA	-19429	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCTATAGCACCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	73510179	73443231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462095_73462175_73509958
ENSMUSG00000056486.19_73443232_73510249_1	chr2	-	1181	7	ISM	ENSMUSG00000056486.19	ENST00000409156.7	1411	11	41537	-10	-19499	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCTATAGCACCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	73510249	73443231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73509958
ENSMUSG00000056486.19_73443232_73537376_1	chr2	-	1293	8	ISM	ENSMUSG00000056486.19	ENST00000409156.7	1411	11	14410	-10	14410	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCTATAGCACCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	73537376	73443231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73509958_73510248_73537262
ENSMUSG00000056486.19_73443253_73510179_1	chr2	-	1090	7	ISM	ENSMUSG00000056486.19	ENST00000409156.7	1411	11	41607	11	-19429	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGAAGGAACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	73510179	73443252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73509958
ENSMUSG00000056486.19_73443253_73537376_1	chr2	-	1272	8	ISM	ENSMUSG00000056486.19	ENST00000409156.7	1411	11	14410	11	14410	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGAAGGAACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	73537376	73443252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73509958_73510248_73537262
ENSMUSG00000056486.19_73443428_73537376_2	chr2	-	1089	8	NNC	ENSMUSG00000056486.19	novel	1411	11	NA	NA	14410	-175	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGCTATCAGAGACTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	73537376	73443427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_73443541_73445005_73445112_73448264_73448395_73454458_73454537_73455220_73455395_73462089_73462175_73509958_73510248_73537262
ENSMUSG00000056486.19_73443428_73551770_1	chr2	-	1209	11	FSM	ENSMUSG00000056486.19	ENST00000409156.7	1411	11	16	186	16	-175	multi-exon	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGCTATCAGAGACTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	73551770	73443427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73509958_73510248_73537262_73537377_73540798_73540827_73546703_73546764_73551746
ENSMUSG00000056515.10_65960606_65974887_1	chr17	-	920	2	ISM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	104860	1882	104748	-1882	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGTTTCTACTTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	65974887	65960605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_65961499_65974860
ENSMUSG00000056515.10_65960641_65974957_1	chr17	-	955	2	ISM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	104790	1917	104678	-1917	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGGGTACCCCCAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	65974957	65960640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_65961499_65974860
ENSMUSG00000056515.10_65960736_65974970_1	chr17	-	873	2	ISM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	104777	2012	104665	-2012	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTTACATATAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	65974970	65960735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_65961499_65974860
ENSMUSG00000056515.10_65960855_66005057_1	chr17	-	933	4	ISM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	74690	2131	74578	-2131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAACTCCTGTAAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	66005057	65960854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985
ENSMUSG00000056515.10_65960964_66029021_1	chr17	-	925	6	ISM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	50726	2240	50614	-2240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGGCTATAATAGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	66029021	65960963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985_66005058_66024476_66024559_66029002
ENSMUSG00000056515.10_65961125_66079635_1	chr17	-	960	7	FSM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	112	2401	0	-2401	multi-exon	TRUE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTTTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66079635	65961124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985_66005058_66024476_66024559_66029002_66029083_66079500
ENSMUSG00000056515.10_65961185_66079640_1	chr17	-	905	7	FSM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	107	2461	-5	-2461	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCAGTTTATGAAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	66079640	65961184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985_66005058_66024476_66024559_66029002_66029083_66079500
ENSMUSG00000056515.10_65961242_66079747_1	chr17	-	955	7	FSM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	0	2518	0	-2518	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCCTGCAAAGAAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	66079747	65961241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985_66005058_66024476_66024559_66029002_66029083_66079500
ENSMUSG00000056569.12_170986027_170987132_1	chr1	+	269	3	ISM	ENSMUSG00000056569.12	ENST00000526189.3	1234	6	2938	986	2938	-944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCTCTTCTACCTG	NA	NA	NA	NA	NA	NA	NA	NA	170986026	170987132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_170986097_170986321_170986455_170987066
ENSMUSG00000056569.12_170986321_170987202_1	chr1	+	266	2	NNC	ENSMUSG00000056569.12	novel	1278	6	NA	NA	3232	-874	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGGCGGAGCCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	170986320	170987202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_170986458_170987073
ENSMUSG00000056569.12_170987163_170987635_1	chr1	+	226	3	ISM	ENSMUSG00000056569.12	ENSMUST00000111334.2	1278	6	4079	441	4074	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGGGTCTGCGACGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	170987162	170987635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_170987203_170987342_170987404_170987510
ENSMUSG00000056608.15_91737962_91750189_1	chr8	+	619	6	ISM	ENSMUSG00000056608.15	ENSMUST00000209423.2	9419	38	78990	29102	78990	-29102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCCCCAGCCATCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	91737961	91750189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164
ENSMUSG00000056608.15_91748397_91757175_1	chr8	+	606	6	ISM	ENSMUSG00000056608.15	ENSMUST00000209423.2	9419	38	89425	22116	89425	-22116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGAGGGCAGTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	91748396	91757175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109
ENSMUSG00000056608.15_91748453_91757233_1	chr8	+	608	6	ISM	ENSMUSG00000056608.15	ENSMUST00000209423.2	9419	38	89481	22058	89481	-22058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATAACAGCTTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	91748452	91757233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109
ENSMUSG00000056608.15_91753362_91763052_1	chr8	+	617	4	ISM	ENSMUSG00000056608.15	ENST00000615216.4	10493	37	94487	18091	94390	-16239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTCTATACCACCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	91753361	91763052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_91753516_91757109_91757313_91761532_91761694_91762953
ENSMUSG00000056608.15_91753431_91763106_1	chr8	+	602	4	ISM	ENSMUSG00000056608.15	ENST00000615216.4	10493	37	94556	18037	94459	-16185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCAGCGTCCCCACACC	NA	NA	NA	NA	NA	NA	NA	NA	91753430	91763106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_91753516_91757109_91757313_91761532_91761694_91762953
ENSMUSG00000056608.15_91753481_91763162_1	chr8	+	608	4	ISM	ENSMUSG00000056608.15	ENST00000615216.4	10493	37	94606	17981	94509	-16129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAGATGTCAAAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	91753480	91763162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_91753516_91757109_91757313_91761532_91761694_91762953
ENSMUSG00000056608.15_91757177_91764100_1	chr8	+	636	4	ISM	ENSMUSG00000056608.15	ENST00000615216.4	10493	37	98302	17043	98205	-15191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCGCCCTGGGTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	91757176	91764100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_91757313_91761532_91761694_91762953_91763227_91764034
ENSMUSG00000056608.15_91757243_91764147_1	chr8	+	617	4	ISM	ENSMUSG00000056608.15	ENST00000615216.4	10493	37	98368	16996	98271	-15144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGCACATCAGAGACTA	NA	NA	NA	NA	NA	NA	NA	NA	91757242	91764147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_91757313_91761532_91761694_91762953_91763227_91764034
ENSMUSG00000056608.15_91761558_91767729_1	chr8	+	632	4	ISM	ENSMUSG00000056608.15	ENSMUST00000209423.2	9419	38	102586	11562	102586	-11562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAGTGAAGAAAAGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	91761557	91767729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_91761694_91762953_91763227_91764034_91764204_91767675
ENSMUSG00000056608.15_91762979_91768734_1	chr8	+	606	4	NIC	ENSMUSG00000056608.15	novel	10493	37	NA	NA	104007	-10557	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTCCTATCCTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	91762978	91768734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_91763227_91764034_91764204_91767675_91767816_91768685
ENSMUSG00000056608.15_91763037_91768794_1	chr8	+	608	4	NIC	ENSMUSG00000056608.15	novel	10493	37	NA	NA	104065	-10497	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTCAAAGACGGGACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	91763036	91768794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_91763227_91764034_91764204_91767675_91767816_91768685
ENSMUSG00000056608.15_91763098_91768848_1	chr8	+	601	4	NIC	ENSMUSG00000056608.15	novel	10493	37	NA	NA	104126	-10443	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACAGATGGCTTAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	91763097	91768848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_91763227_91764034_91764204_91767675_91767816_91768685
ENSMUSG00000056608.15_91767742_91777806_1	chr8	+	610	5	ISM	ENSMUSG00000056608.15	ENST00000398510.7	11268	38	108786	3287	108770	-1485	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGCCTAAAAGTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	91767741	91777806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_91767820_91768685_91768908_91769469_91769599_91775733_91775839_91777730
ENSMUSG00000056612.8_6952336_6954258_1	chr19	+	656	3	ISM	ENSMUSG00000056612.8	ENSMUST00000070850.8	999	4	0	434	0	-360	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTATTCTCCTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	6952335	6954258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_6952875_6953911_6953996_6954225
ENSMUSG00000056612.8_6952443_6954477_2	chr19	+	677	4	FSM	ENSMUSG00000056612.8	ENSMUST00000070850.8	999	4	107	215	107	-141	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACAGCAATACCGGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	6952442	6954477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6952875_6953911_6953996_6954225_6954259_6954349
ENSMUSG00000056612.8_6952443_6954477_3	chr19	+	669	3	NNC	ENSMUSG00000056612.8	novel	999	4	NA	NA	107	-141	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACAGCAATACCGGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	6952442	6954477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_6952875_6953911_6954021_6954349
ENSMUSG00000056612.8_6952683_6954692_1	chr19	+	652	4	FSM	ENSMUSG00000056612.8	ENSMUST00000070850.8	999	4	347	0	74	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGGCTGGTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	6952682	6954692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6952875_6953911_6953996_6954225_6954259_6954349
ENSMUSG00000056629.17_6955112_6956511_1	chr19	-	546	4	NNC	ENSMUSG00000056629.17	novel	664	6	NA	NA	1107	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGAGTGAGTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	6956511	6955111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_6955303_6955733_6955805_6955925_6956039_6956340
ENSMUSG00000056629.17_6955112_6956511_2	chr19	-	562	4	NNC	ENSMUSG00000056629.17	novel	664	6	NA	NA	1107	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGAGTGAGTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	6956511	6955111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_6955303_6955378_6955415_6955874_6956039_6956340
ENSMUSG00000056629.17_6955112_6956511_3	chr19	-	538	4	NNC	ENSMUSG00000056629.17	novel	664	6	NA	NA	1107	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGAGTGAGTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	6956511	6955111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_6955303_6955741_6955805_6955925_6956039_6956340
ENSMUSG00000056629.17_6955990_6956749_1	chr19	-	286	3	ISM	ENSMUSG00000056629.17	ENST00000652762.2	1664	6	1050	868	869	-868	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTTTGTTTTCTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	6956749	6955989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6956039_6956340_6956510_6956681
ENSMUSG00000056629.17_6956446_6956884_1	chr19	-	267	2	ISM	ENSMUSG00000056629.17	ENST00000652762.2	1664	6	915	1324	734	-1324	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGGGGCCGAAGGCAAACG	NA	NA	NA	NA	NA	NA	NA	NA	6956884	6956445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6956510_6956681
ENSMUSG00000056648.6_96173870_96175310_1	chr11	+	662	2	FSM	ENSMUSG00000056648.6	ENST00000576562.1	743	2	81	0	81	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGGGCCCGGACTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	96173869	96175310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_96174213_96174991
ENSMUSG00000056666.14_72575458_72578585_1	chr6	+	632	3	ISM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	0	6823	0	-5779	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGCCGAAAGGAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	72575457	72578585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72575780_72577955_72578139_72578458
ENSMUSG00000056666.14_72575611_72579685_1	chr6	+	642	4	ISM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	153	5723	0	-4679	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCTTGACTCAGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	72575610	72579685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637
ENSMUSG00000056666.14_72575747_72579788_1	chr6	+	609	4	ISM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	289	5620	136	-4576	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTCCCGTGAGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	72575746	72579788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637
ENSMUSG00000056666.14_72577977_72580702_1	chr6	+	672	4	ISM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	2519	4706	2366	-3662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTACCCTCGAGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	72577976	72580702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72578139_72578458_72578701_72579637_72579840_72580636
ENSMUSG00000056666.14_72578106_72580815_1	chr6	+	656	4	ISM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	2648	4593	2495	-3549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTGGGAGAGCGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	72578105	72580815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72578139_72578458_72578701_72579637_72579840_72580636
ENSMUSG00000056666.14_72578547_72581943_1	chr6	+	649	4	ISM	ENSMUSG00000056666.14	ENSMUST00000176364.8	1647	10	2936	2421	2936	-2421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGACTGTCCGCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	72578546	72581943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72578701_72579637_72579840_72580636_72580835_72581848
ENSMUSG00000056666.14_72579744_72583452_1	chr6	+	638	5	ISM	ENSMUSG00000056666.14	ENSMUST00000176364.8	1647	10	4133	912	4133	-912	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCTGGGAGGAGCGATT	NA	NA	NA	NA	NA	NA	NA	NA	72579743	72583452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367
ENSMUSG00000056666.14_72580636_72583604_1	chr6	+	617	5	ISM	ENSMUSG00000056666.14	ENSMUST00000176364.8	1647	10	5025	760	5025	-760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGGCAGGAGGAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	72580635	72583604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555
ENSMUSG00000056666.14_72580692_72583659_1	chr6	+	616	5	ISM	ENSMUSG00000056666.14	ENSMUST00000176364.8	1647	10	5081	705	5081	-705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTCGTGGAAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	72580691	72583659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555
ENSMUSG00000056666.14_72580739_72583714_1	chr6	+	624	5	ISM	ENSMUSG00000056666.14	ENSMUST00000176364.8	1647	10	5128	650	5128	-650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCAAGGTAGGGGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	72580738	72583714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555
ENSMUSG00000056666.14_72583628_72584545_1	chr6	+	576	3	ISM	ENSMUSG00000056666.14	ENSMUST00000176364.8	1647	10	8017	-181	8017	181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCATGAAGAATGCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	72583627	72584545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72583723_72583856_72584017_72584224
ENSMUSG00000056666.14_72583628_72584613_1	chr6	+	644	3	ISM	ENSMUSG00000056666.14	ENSMUST00000176364.8	1647	10	8017	-249	8017	249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTGTTGGCTACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	72583627	72584613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72583723_72583856_72584017_72584224
ENSMUSG00000056666.14_72583882_72584725_1	chr6	+	636	2	ISM	ENSMUSG00000056666.14	ENSMUST00000176364.8	1647	10	8271	-361	8271	361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTCTCTCAAAGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	72583881	72584725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72584017_72584224
ENSMUSG00000056666.14_72583977_72584849_1	chr6	+	665	2	ISM	ENSMUSG00000056666.14	ENSMUST00000176364.8	1647	10	8366	-485	8366	485	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTTGCTGGCACATAGT	NA	NA	NA	NA	NA	NA	NA	NA	72583976	72584849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_72584017_72584224
ENSMUSG00000056671.8_42008761_42084259_2	chr18	-	719	7	NNC	ENSMUSG00000056671.8	novel	868	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTGCTTCAAATCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	42084259	42008760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_42008919_42014277_42014351_42045434_42045541_42065665_42065822_42068232_42068307_42070698_42070757_42084165
ENSMUSG00000056698.12_72543461_72552652_1	chr6	-	620	4	ISM	ENSMUSG00000056698.12	ENST00000393852.8	1015	9	10845	-181	10845	181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCCGTCCTCCAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	72552652	72543460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623
ENSMUSG00000056698.12_72543513_72552727_1	chr6	-	643	4	ISM	ENSMUSG00000056698.12	ENST00000393852.8	1015	9	10770	-129	10770	129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCCACATTTCTACATCAG	NA	NA	NA	NA	NA	NA	NA	NA	72552727	72543512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623
ENSMUSG00000056698.12_72543732_72574596_1	chr6	-	1449	12	NNC	ENSMUSG00000056698.12	novel	2122	12	NA	NA	34	-90	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1820	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACAGGGACCTCACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	72574596	72543731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72571998_72574426
ENSMUSG00000056698.12_72543732_72574596_2	chr6	-	1446	12	NNC	ENSMUSG00000056698.12	novel	1575	12	NA	NA	34	-90	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1773	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACAGGGACCTCACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	72574596	72543731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556690_72557283_72557353_72563427_72563498_72564593_72564665_72571718_72572004_72574426
ENSMUSG00000056698.12_72543732_72574596_3	chr6	-	1455	12	NIC	ENSMUSG00000056698.12	novel	2122	12	NA	NA	34	-90	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1897	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACAGGGACCTCACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	72574596	72543731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72574426
ENSMUSG00000056698.12_72543732_72574596_4	chr6	-	1446	12	NNC	ENSMUSG00000056698.12	novel	1575	12	NA	NA	34	-90	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1807	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACAGGGACCTCACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	72574596	72543731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554667_72556606_72556695_72557283_72557353_72563427_72563498_72564593_72564665_72571718_72572004_72574426
ENSMUSG00000056698.12_72546311_72554359_1	chr6	-	264	3	ISM	ENSMUSG00000056698.12	ENST00000393852.8	1015	9	9138	2669	9138	-1778	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTGATGTCTGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	72554359	72546310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_72546321_72552623_72552755_72554236
ENSMUSG00000056737.15_72521374_72539966_1	chr6	+	1239	9	NNC	ENSMUSG00000056737.15	novel	1247	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTGGCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	72521373	72539966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_72521450_72532431_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ENSMUSG00000056737.15_72526256_72539966_1	chr6	+	1394	10	NNC	ENSMUSG00000056737.15	novel	1400	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5603	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTGGCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	72526255	72539966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_72526485_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539798
ENSMUSG00000056737.15_72526256_72539966_2	chr6	+	1392	9	NNC	ENSMUSG00000056737.15	novel	1400	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTGGCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	72526255	72539966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_72526485_72532431_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ENSMUSG00000056737.15_72526256_72539966_3	chr6	+	1395	10	NNC	ENSMUSG00000056737.15	novel	1400	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTGGCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	72526255	72539966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_72526485_72532255_72532292_72532459_72532633_72532738_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ENSMUSG00000056737.15_72526256_72539966_4	chr6	+	1388	9	NNC	ENSMUSG00000056737.15	novel	1400	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2045	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTGGCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	72526255	72539966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_72526485_72532431_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538014_72538100_72539792
ENSMUSG00000056737.15_72526256_72539966_5	chr6	+	1395	10	NNC	ENSMUSG00000056737.15	novel	1400	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5999	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTGGCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	72526255	72539966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_72526485_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533231_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ENSMUSG00000056749.8_53121744_53134974_1	chr13	-	1392	2	FSM	ENSMUSG00000056749.8	ENSMUST00000071065.8	2026	2	135	499	135	-499	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCAAGATTGGTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	53134974	53121743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_53123058_53134896
ENSMUSG00000056749.8_53121744_53135109_1	chr13	-	1527	2	FSM	ENSMUSG00000056749.8	ENSMUST00000071065.8	2026	2	0	499	0	-499	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCAAGATTGGTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	53135109	53121743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_53123058_53134896
ENSMUSG00000056770.16_108073058_108074874_1	chr12	-	939	2	ISM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	70699	368	70601	-368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCTGGGTTTTTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	108074874	108073057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108073938_108074815
ENSMUSG00000056770.16_108073108_108074928_1	chr12	-	943	2	ISM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	70645	418	70547	-418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGGAGATGAGGCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	108074928	108073107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108073938_108074815
ENSMUSG00000056770.16_108073168_108074975_1	chr12	-	930	2	ISM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	70598	478	70500	-478	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAATGAGTGCTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	108074975	108073167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108073938_108074815
ENSMUSG00000056770.16_108073297_108078513_1	chr12	-	1013	4	ISM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	67060	607	66962	-607	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTGAATAGCAGCGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	108078513	108073296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388
ENSMUSG00000056770.16_108073493_108084519_1	chr12	-	953	6	ISM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	61054	803	60956	-803	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGCTCATGGAATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	108084519	108073492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500
ENSMUSG00000056770.16_108073548_108084572_1	chr12	-	951	6	ISM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	61001	858	60903	-858	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGACTGGAGAAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	108084572	108073547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500
ENSMUSG00000056770.16_108073738_108124112_1	chr12	-	963	8	ISM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	21461	1048	21363	-1048	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGGACTCAAGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	108124112	108073737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012
ENSMUSG00000056770.16_108073806_108124165_1	chr12	-	948	8	ISM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	21408	1116	21310	-1116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACATGGAGGAGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	108124165	108073805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012
ENSMUSG00000056770.16_108074815_108124607_1	chr12	-	994	8	ISM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	20966	2125	20868	-2125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGATCATACTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	108124607	108074814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534
ENSMUSG00000056770.16_108074921_108126552_1	chr12	-	949	9	ISM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	19021	2231	18923	-2231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAACGCAGAGTTTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	108126552	108074920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491
ENSMUSG00000056770.16_108078389_108131386_1	chr12	-	1053	9	ISM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	14187	5699	14089	4645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTACACAGTAATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	108131386	108078388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321
ENSMUSG00000056770.16_108079578_108145472_1	chr12	-	992	9	ISM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	101	6888	3	3456	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTTCTGCATTCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	108145472	108079577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ENSMUSG00000056770.16_108084556_108145573_1	chr12	-	963	8	FSM	ENSMUSG00000056770.16	ENSMUST00000109879.8	2387	8	-98	1522	0	-1522	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACCTTGGCTCTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	108145573	108084555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ENSMUSG00000056820.8_125740246_125759425_1	chr8	+	672	5	ISM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	510	1506	458	-1506	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTCATTGGCAACACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	125740245	125759425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759235
ENSMUSG00000056820.8_125751244_125759534_1	chr8	+	560	3	ISM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	11508	1397	11456	-1397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATTCCTAAGCACATGC	NA	NA	NA	NA	NA	NA	NA	NA	125751243	125759534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125751377_125755506_125755635_125759235
ENSMUSG00000056820.8_125751277_125759604_1	chr8	+	597	3	ISM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	11541	1327	11489	-1327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTAAGCAGCCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	125751276	125759604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125751377_125755506_125755635_125759235
ENSMUSG00000056820.8_125751341_125759646_1	chr8	+	575	3	ISM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	11605	1285	11553	-1285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGACCAGTTGGTGAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	125751340	125759646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125751377_125755506_125755635_125759235
ENSMUSG00000056820.8_125755600_125759772_1	chr8	+	572	2	ISM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	15864	1159	15812	-1159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACACTCCCGCGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	125755599	125759772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125755635_125759235
ENSMUSG00000056832.15_38359063_38389028_1	chr6	+	1257	14	ISM	ENSMUSG00000056832.15	ENST00000430935.5	1792	16	53	13409	53	-13409	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTCCTTCTTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	38359062	38389028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_38359149_38362367_38362461_38364531_38364647_38366916_38366967_38368353_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958
ENSMUSG00000056832.15_38359067_38382895_1	chr6	+	877	10	ISM	ENSMUSG00000056832.15	ENST00000343187.8	1833	16	57	19542	57	-19542	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTTCCAGTTGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	38359066	38382895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_38359149_38364531_38364647_38366916_38366967_38368353_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871
ENSMUSG00000056832.15_38362366_38398580_1	chr6	+	1280	14	ISM	ENSMUSG00000056832.15	ENST00000430935.5	1792	16	3356	3857	3356	-3857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTTGGGTGACAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	38362365	38398580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_38362461_38364531_38364647_38366916_38366967_38368353_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473
ENSMUSG00000056832.15_38364579_38402128_1	chr6	+	1204	14	ISM	ENSMUSG00000056832.15	ENST00000430935.5	1792	16	5569	309	5569	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGATCATGAAGAAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	38364578	38402128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_38364647_38366916_38366967_38368353_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473_38398581_38402062
ENSMUSG00000056832.15_38368442_38402292_1	chr6	+	1162	12	ISM	ENSMUSG00000056832.15	ENST00000430935.5	1792	16	9432	145	9432	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAGGATGAGTGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	38368441	38402292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473_38398581_38402062
ENSMUSG00000056832.15_38371953_38402437_1	chr6	+	1253	11	ISM	ENSMUSG00000056832.15	ENST00000430935.5	1792	16	12943	0	12943	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATACTAGTTTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38371952	38402437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473_38398581_38402062
ENSMUSG00000056832.15_38372035_38400374_1	chr6	+	886	11	ISM	ENSMUSG00000056832.15	ENST00000343187.8	1833	16	13025	2063	13025	-2063	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGGCATCTTCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	38372034	38400374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473_38398581_38400284
ENSMUSG00000056832.15_38375216_38402139_1	chr6	+	915	11	ISM	ENSMUSG00000056832.15	ENST00000343187.8	1833	16	16206	298	16206	-298	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGGGCCAAGGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	38375215	38402139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473_38398581_38400284_38400419_38402062
ENSMUSG00000056851.15_102379088_102406999_1	chr15	+	1259	13	NNC	ENSMUSG00000056851.15	novel	1576	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATCCATCTGTGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	102379087	102406999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_102379239_102381695_102381862_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102379088_102406999_2	chr15	+	1259	14	FSM	ENSMUSG00000056851.15	ENSMUST00000229618.2	1576	14	0	317	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATCCATCTGTGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	102379087	102406999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102379192_102407074_1	chr15	+	1230	14	FSM	ENSMUSG00000056851.15	ENSMUST00000229618.2	1576	14	104	242	-8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTTTATCATCCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	102379191	102407074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102379192_102407074_2	chr15	+	1230	13	NNC	ENSMUSG00000056851.15	novel	1576	14	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTTTATCATCCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	102379191	102407074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_102379239_102381695_102381862_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102381769_102407484_1	chr15	+	1481	11	NNC	ENSMUSG00000056851.15	novel	996	12	NA	NA	0	168	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCCCTCAATCACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	102381768	102407484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_102381862_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102381769_102407486_1	chr15	+	1480	12	NIC	ENSMUSG00000056851.15	novel	1086	14	NA	NA	0	170	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCTCAATCACCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	102381768	102407486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_+_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102398189_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102382580_102407316_1	chr15	+	1269	12	ISM	ENSMUSG00000056851.15	ENSMUST00000229618.2	1576	14	3492	0	811	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGGAGCTTTTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	102382579	102407316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102387072_102407773_1	chr15	+	1503	8	NIC	ENSMUSG00000056851.15	novel	1086	14	NA	NA	5303	457	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTAGAAAATAACTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	102387071	102407773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_+_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102398189_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102391633_102399238_1	chr15	+	639	8	ISM	ENSMUSG00000056851.15	ENSMUST00000078404.15	3222	14	10461	9258	9864	-7722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAATCTCTTCACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	102391632	102399238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068
ENSMUSG00000056851.15_102391633_102407896_1	chr15	+	1480	7	ISM	ENSMUSG00000056851.15	ENST00000455667.7	2547	12	9918	600	9864	580	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTTCAAGGTTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	102391632	102407896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102392589_102406999_1	chr15	+	636	8	ISM	ENSMUSG00000056851.15	ENSMUST00000078404.15	3222	14	11417	1497	10820	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATCCATCTGTGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	102392588	102406999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056870.10_44591757_44805648_1	chr1	+	991	7	NNC	ENSMUSG00000056870.10	novel	1024	7	NA	NA	29	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTCTTTTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	44591756	44805648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_44591864_44609997_44610121_44728322_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173
ENSMUSG00000056870.10_44591757_44805648_2	chr1	+	996	7	FSM	ENSMUSG00000056870.10	ENST00000409637.7	1024	7	29	-1	29	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTCTTTTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	44591756	44805648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_44591869_44609997_44610121_44728322_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173
ENSMUSG00000056870.10_44591757_44805648_3	chr1	+	991	7	NNC	ENSMUSG00000056870.10	novel	1024	7	NA	NA	29	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTCTTTTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	44591756	44805648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_44591869_44609997_44610121_44728327_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173
ENSMUSG00000056870.10_44591757_44805648_4	chr1	+	995	7	NNC	ENSMUSG00000056870.10	novel	1024	7	NA	NA	29	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	987	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTCTTTTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	44591756	44805648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_44591869_44609998_44610121_44728322_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173
ENSMUSG00000056870.10_44591757_44805648_5	chr1	+	995	7	NNC	ENSMUSG00000056870.10	novel	1024	7	NA	NA	29	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	957	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTCTTTTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	44591756	44805648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_44591869_44609997_44610121_44728322_44728376_44747776_44747839_44783634_44783706_44793502_44793602_44805173
ENSMUSG00000056870.10_44591757_44805648_6	chr1	+	990	7	NNC	ENSMUSG00000056870.10	novel	1024	7	NA	NA	29	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTCTTTTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	44591756	44805648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_44591869_44609997_44610115_44728322_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173
ENSMUSG00000056870.10_44610025_44820233_1	chr1	+	836	9	ISM	ENSMUSG00000056870.10	ENST00000359135.7	3021	12	18297	15765	18297	-7801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACCCATCCCTAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	44610024	44820233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44610121_44728322_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173_44805312_44812430_44812548_44813212_44813306_44820127
ENSMUSG00000056870.10_44728304_44827655_1	chr1	+	840	9	ISM	ENSMUSG00000056870.10	ENSMUST00000160854.8	1399	10	137451	379	0	-379	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGACTTTCCTCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	44728303	44827655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173_44805312_44812430_44812548_44813212_44813306_44820127_44820267_44827607
ENSMUSG00000056870.10_44747775_44834244_1	chr1	+	643	6	FSM	ENSMUSG00000056870.10	ENST00000409805.5	643	6	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGACAGCTATTATACTT	NA	NA	NA	NA	NA	NA	NA	NA	44747774	44834244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_44747839_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ENSMUSG00000056870.10_44783632_44834244_1	chr1	+	890	8	ISM	ENSMUSG00000056870.10	ENST00000359135.7	3021	12	191904	1754	35857	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGACAGCTATTATACTT	NA	NA	NA	NA	NA	NA	NA	NA	44783631	44834244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44783706_44793502_44793602_44805173_44805312_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ENSMUSG00000056870.10_44805210_44834380_1	chr1	+	817	6	ISM	ENSMUSG00000056870.10	ENST00000359135.7	3021	12	213482	1618	57435	136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTTATGTTCCCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	44805209	44834380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44805312_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ENSMUSG00000056870.10_44805247_44834447_1	chr1	+	847	6	ISM	ENSMUSG00000056870.10	ENST00000359135.7	3021	12	213519	1551	57472	203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTTTAAACTATCATTA	NA	NA	NA	NA	NA	NA	NA	NA	44805246	44834447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44805312_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ENSMUSG00000056870.10_44813245_44834633_1	chr1	+	819	4	ISM	ENSMUSG00000056870.10	ENST00000409805.5	643	6	65470	-389	65470	389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTTACCTCATTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	44813244	44834633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44813306_44820127_44820267_44827607_44827703_44834109
ENSMUSG00000056870.10_44820175_44834772_1	chr1	+	850	3	ISM	ENSMUSG00000056870.10	ENST00000409805.5	643	6	72400	-528	72400	528	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCAGTCATTTAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	44820174	44834772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44820267_44827607_44827703_44834109
ENSMUSG00000056870.10_44820238_44834813_1	chr1	+	828	3	ISM	ENSMUSG00000056870.10	ENST00000409805.5	643	6	72463	-569	72463	569	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTCAAAAGTAACAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	44820237	44834813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44820267_44827607_44827703_44834109
ENSMUSG00000056870.10_44827678_44834933_1	chr1	+	849	2	ISM	ENSMUSG00000056870.10	ENST00000409805.5	643	6	79903	-689	79903	689	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTTACTTTCTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	44827677	44834933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_44827703_44834109
ENSMUSG00000056938.17_102992552_103002660_1	chr11	+	1673	10	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	38	-198	intron_retention	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCAGCTCACACCTACG	NA	NA	NA	NA	NA	NA	NA	NA	102992551	103002660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_102992615_102993507_102993923_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ENSMUSG00000056938.17_102992552_103002779_1	chr11	+	1671	9	FSM	ENSMUSG00000056938.17	ENSMUST00000107040.10	1959	9	44	244	38	-79	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTCGGCTCCCTGCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	102992551	103002779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_102992615_102993507_102993923_102994351_102994471_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ENSMUSG00000056938.17_102993565_103002790_1	chr11	+	1683	9	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	-347	-68	intron_retention	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGAGGCTCAGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	102993564	103002790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_102993923_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ENSMUSG00000056938.17_102993707_103002917_1	chr11	+	1668	9	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	-205	59	intron_retention	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGGGGCTGGGATGCCG	NA	NA	NA	NA	NA	NA	NA	NA	102993706	103002917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_102993923_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ENSMUSG00000056938.17_102993847_103003023_1	chr11	+	1634	9	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	-65	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCTGCTGTCTGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	102993846	103003023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_102993923_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ENSMUSG00000056938.17_102993934_103002858_1	chr11	+	1724	9	FSM	ENSMUSG00000056938.17	ENST00000398322.7	1746	9	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGCAGGAAAGACCGG	NA	NA	NA	NA	NA	NA	NA	NA	102993933	103002858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996142_102996228_102996305_102996920_102997061_103002367
ENSMUSG00000056938.17_102993934_103002858_2	chr11	+	1722	9	NNC	ENSMUSG00000056938.17	novel	1746	9	NA	NA	22	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGCAGGAAAGACCGG	NA	NA	NA	NA	NA	NA	NA	NA	102993933	103002858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996142_102996228_102996305_102996920_102997061_103002369
ENSMUSG00000056938.17_102994078_103002858_1	chr11	+	1580	9	FSM	ENSMUSG00000056938.17	ENST00000398322.7	1746	9	166	0	166	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGCAGGAAAGACCGG	NA	NA	NA	NA	NA	NA	NA	NA	102994077	103002858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996142_102996228_102996305_102996920_102997061_103002367
ENSMUSG00000056941.18_153460025_153463739_1	chr2	-	1507	3	ISM	ENSMUSG00000056941.18	ENSMUST00000109782.2	1343	10	10921	-729	10921	729	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCCGTGCACACCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	153463739	153460024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_153461433_153462365_153462415_153463689
ENSMUSG00000056941.18_153460223_153464731_1	chr2	-	1478	6	ISM	ENSMUSG00000056941.18	ENSMUST00000109782.2	1343	10	9929	-531	9929	531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTTGGGAAAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	153464731	153460222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691
ENSMUSG00000056941.18_153460460_153474551_1	chr2	-	1453	9	FSM	ENSMUSG00000056941.18	ENSMUST00000071852.10	3210	9	150	1607	109	294	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACATCTTCTTATCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	153474551	153460459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
ENSMUSG00000056941.18_153460509_153474651_1	chr2	-	1504	9	FSM	ENSMUSG00000056941.18	ENSMUST00000071852.10	3210	9	50	1656	9	245	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCACAGCATCCACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	153474651	153460508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
ENSMUSG00000056941.18_153460561_153474667_1	chr2	-	1468	9	FSM	ENSMUSG00000056941.18	ENSMUST00000071852.10	3210	9	34	1708	-7	193	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTCTGTGGTTAAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	153474667	153460560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
ENSMUSG00000056962.12_116726715_116734206_1	chr11	-	1584	7	FSM	ENSMUSG00000056962.12	ENST00000445478.6	1590	7	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACGGCTCCCATAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	116734206	116726714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116726904_116728461_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157_116733547_116733890
ENSMUSG00000056962.12_116728439_116733939_1	chr11	-	1006	5	NNC	ENSMUSG00000056962.12	novel	1075	5	NA	NA	80	17	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGGATATGCTCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	116733939	116728438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_116728590_116731235_116731372_116731894_116732182_116733157_116733547_116733896
ENSMUSG00000056962.12_116728439_116733939_2	chr11	-	1012	5	FSM	ENSMUSG00000056962.12	ENST00000585429.1	1075	5	80	-17	80	17	multi-exon	FALSE	canonical	NA	NA	NA	NA	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGGATATGCTCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	116733939	116728438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116728590_116731235_116731372_116731894_116732182_116733157_116733547_116733890
ENSMUSG00000056962.12_116728439_116733939_3	chr11	-	1006	5	NNC	ENSMUSG00000056962.12	novel	1075	5	NA	NA	80	17	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGGATATGCTCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	116733939	116728438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_116728590_116731241_116731372_116731894_116732182_116733157_116733547_116733890
ENSMUSG00000056999.17_37246433_37247051_1	chr19	-	367	2	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	93036	39	92959	-39	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGGAAACAATCCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	37247051	37246432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37246631_37246882
ENSMUSG00000056999.17_37246438_37262627_1	chr19	-	2185	7	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	77460	44	77383	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGATTGGAAACAATCC	NA	NA	NA	NA	NA	NA	NA	NA	37262627	37246437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37246631_37246882_37248237_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604
ENSMUSG00000056999.17_37246527_37262673_1	chr19	-	2142	7	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	77414	133	77337	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGCTCACCTGCCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	37262673	37246526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37246631_37246882_37248237_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604
ENSMUSG00000056999.17_37246960_37265548_1	chr19	-	2157	8	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	74539	566	74462	-566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGATTGGCCAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	37265548	37246959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37248237_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496
ENSMUSG00000056999.17_37247101_37268126_1	chr19	-	2133	9	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	71961	707	71884	-707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTATTAAAACTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	37268126	37247100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37248237_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068
ENSMUSG00000056999.17_37247305_37275465_1	chr19	-	2114	11	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	64622	911	64545	-911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCGTTCTGAAATAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	37275465	37247304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37248237_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450
ENSMUSG00000056999.17_37247308_37255191_1	chr19	-	1184	5	ISM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	84819	1166	84819	-914	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTGCGTTCTGAAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	37255191	37247307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139
ENSMUSG00000056999.17_37247446_37281364_1	chr19	-	2153	12	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	58723	1052	58646	-1052	internal_fragment	TRUE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTGCTAAGATCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	37281364	37247445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37248237_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292
ENSMUSG00000056999.17_37247649_37258109_1	chr19	-	1190	6	ISM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	81901	1507	81901	-1255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGCTGATTTTATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37258109	37247648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983
ENSMUSG00000056999.17_37247656_37289535_1	chr19	-	2132	14	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	50552	1262	50475	-1262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGAACTTGCTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	37289535	37247655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37248237_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481
ENSMUSG00000056999.17_37247829_37262696_1	chr19	-	1256	8	ISM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	77314	1687	77314	-1435	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	37262696	37247828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604
ENSMUSG00000056999.17_37247829_37292302_1	chr19	-	2241	17	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	47785	1435	47708	-1435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	37292302	37247828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37248237_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232
ENSMUSG00000056999.17_37248045_37292820_1	chr19	-	2135	18	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	47267	1651	47190	-1651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAATCAGGCATTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	37292820	37248044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37248237_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803
ENSMUSG00000056999.17_37248083_37265576_1	chr19	-	1203	10	ISM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	74434	1941	74434	-1689	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCTGGCTTGCTATTA	NA	NA	NA	NA	NA	NA	NA	NA	37265576	37248082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496
ENSMUSG00000056999.17_37248186_37295421_1	chr19	-	2136	19	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	44666	1792	44589	-1792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTCGTGAAACCACATAT	NA	NA	NA	NA	NA	NA	NA	NA	37295421	37248185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37248237_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375
ENSMUSG00000056999.17_37248196_37262647_1	chr19	-	399	6	ISM	ENSMUSG00000056999.17	ENST00000678673.1	4191	24	77440	1802	77363	-1802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTTTCCCCTCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	37262647	37248195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37261519_37261632_37262604
ENSMUSG00000056999.17_37255183_37302622_1	chr19	-	2133	18	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	37465	8789	37388	-8789	internal_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGGGGGAAATCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	37302622	37255182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546
ENSMUSG00000056999.17_37255231_37302683_1	chr19	-	2146	18	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	37404	8837	37327	-8837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCGGCGACTCGACAAACC	NA	NA	NA	NA	NA	NA	NA	NA	37302683	37255230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546
ENSMUSG00000056999.17_37255346_37306455_1	chr19	-	2140	19	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	33632	8952	33555	-8952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAACCACCCCACTACC	NA	NA	NA	NA	NA	NA	NA	NA	37306455	37255345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379
ENSMUSG00000056999.17_37255397_37306513_1	chr19	-	2147	19	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	33574	9003	33497	-9003	internal_fragment	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCCCGTCGGGCCAACG	NA	NA	NA	NA	NA	NA	NA	NA	37306513	37255396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379
ENSMUSG00000056999.17_37258098_37307898_1	chr19	-	2163	19	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	32189	11704	32112	-11704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCTACTACCAGACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	37307898	37258097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826
ENSMUSG00000056999.17_37262604_37340016_1	chr19	-	2215	18	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	71	16210	-6	-16210	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGAGGTGAAGTTCTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	37340016	37262603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ENSMUSG00000056999.17_37306475_37340010_1	chr19	-	396	3	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	77	60081	0	-60081	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATGCTGGAAGTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	37340010	37306474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37306588_37307826_37308012_37339912
ENSMUSG00000056999.17_37306530_37340068_1	chr19	-	399	3	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	19	60136	19	-60136	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTGGGAACCAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	37340068	37306529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_37306588_37307826_37308012_37339912
ENSMUSG00000057000.13_134972848_134980392_1	chrX	-	2505	16	ISM	ENSMUSG00000057000.13	ENSMUST00000080929.13	2978	19	5612	0	5612	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTTTATATGTATG	NA	NA	NA	NA	NA	NA	NA	NA	134980392	134972847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979846_134980109_134980215_134980308
ENSMUSG00000057000.13_134972984_134981491_1	chrX	-	2490	17	ISM	ENSMUSG00000057000.13	ENSMUST00000080929.13	2978	19	4513	136	4513	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGTACTTATATTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	134981491	134972983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979846_134980109_134980215_134980308_134980393_134981370
ENSMUSG00000057000.13_134973315_134985991_1	chrX	-	2498	19	FSM	ENSMUSG00000057000.13	ENSMUST00000080929.13	2978	19	13	467	13	-467	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGGACTGCTGTACATA	NA	NA	NA	NA	NA	NA	NA	NA	134985991	134973314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979846_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134985845
ENSMUSG00000057037.9_139481260_139485359_1	chr1	-	486	3	FSM	ENSMUSG00000057037.9	ENST00000476712.6	490	3	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATATGTAAGTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	139485359	139481259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_139481434_139484069_139484199_139485176
ENSMUSG00000057069.8_12596569_12624677_1	chr13	+	1185	11	NIC	ENSMUSG00000057069.8	novel	3341	16	NA	NA	15780	260	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGGCGTGTAGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	12596568	12624677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr13_+_12596633_12598417_12598492_12605641_12605763_12605865_12605913_12610578_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12624456
ENSMUSG00000057069.8_12605686_12624861_1	chr13	+	1191	9	NNC	ENSMUSG00000057069.8	novel	3341	16	NA	NA	24897	444	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTAATACCACAATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	12605685	12624861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_12605763_12605865_12605917_12610578_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12624456
ENSMUSG00000057069.8_12616632_12625393_1	chr13	+	1221	4	ISM	ENSMUSG00000057069.8	ENSMUST00000220811.2	3341	16	35843	892	35843	-892	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATAGGATGGAAATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	12616631	12625393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_12616695_12617199_12617287_12619216_12619351_12624456
ENSMUSG00000057098.15_44798811_44882287_1	chr11	+	384	5	ISM	ENSMUSG00000057098.15	ENST00000380654.8	1635	10	38895	13722	38895	-13535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCCTCGGAACCACAACCA	NA	NA	NA	NA	NA	NA	NA	NA	44798810	44882287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_44798865_44815275_44815403_44863690_44863780_44881342_44881409_44882239
ENSMUSG00000057098.15_44863728_44883212_1	chr11	+	373	4	ISM	ENSMUSG00000057098.15	ENST00000380654.8	1635	10	103812	12797	103812	-12610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTCACCACAAGCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	44863727	44883212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_44863780_44881342_44881409_44882239_44882418_44883135
ENSMUSG00000057098.15_44882260_44886896_1	chr11	+	402	3	ISM	ENSMUSG00000057098.15	ENST00000380654.8	1635	10	122344	9113	122344	-8926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTTCTCCTTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	44882259	44886896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_44882418_44883135_44883316_44886832
ENSMUSG00000057098.15_44882386_44886998_1	chr11	+	378	3	ISM	ENSMUSG00000057098.15	ENST00000380654.8	1635	10	122470	9011	122470	-8824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAGCACCAACGGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	44882385	44886998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_44882418_44883135_44883316_44886832
ENSMUSG00000057098.15_44883191_44895606_1	chr11	+	383	3	ISM	ENSMUSG00000057098.15	ENST00000380654.8	1635	10	123275	403	123275	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTGGATTCTGCTACGA	NA	NA	NA	NA	NA	NA	NA	NA	44883190	44895606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_44883316_44886832_44887028_44895543
ENSMUSG00000057098.15_44883248_44895652_1	chr11	+	372	3	ISM	ENSMUSG00000057098.15	ENST00000380654.8	1635	10	123332	357	123332	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTTTTAACTCAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	44883247	44895652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_44883316_44886832_44887028_44895543
ENSMUSG00000057110.16_35022270_35037331_1	chr2	+	1408	9	ISM	ENSMUSG00000057110.16	ENST00000373847.5	3398	18	48	13603	0	-352	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTAGCTGCGGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	35022269	35037331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_35022369_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243
ENSMUSG00000057110.16_35038930_35050648_1	chr2	+	1403	8	ISM	ENSMUSG00000057110.16	ENSMUST00000113037.10	5970	34	16684	18186	16660	-286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAGGAAAAACTGACA	NA	NA	NA	NA	NA	NA	NA	NA	35038929	35050648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532
ENSMUSG00000057110.16_35038991_35050673_1	chr2	+	1367	8	ISM	ENSMUSG00000057110.16	ENSMUST00000113037.10	5970	34	16745	18161	16721	-261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCCTTTGAGGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	35038990	35050673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532
ENSMUSG00000057110.16_35041692_35050935_1	chr2	+	1443	6	ISM	ENSMUSG00000057110.16	ENSMUST00000113037.10	5970	34	19446	17899	19422	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAGATACCTGGAAACGA	NA	NA	NA	NA	NA	NA	NA	NA	35041691	35050935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532
ENSMUSG00000057113.14_33102287_33104060_1	chr11	-	641	2	ISM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	9146	0	9012	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2902	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTCAGTGGATAGT	NA	NA	NA	NA	NA	NA	NA	NA	33104060	33102286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_33102853_33103985
ENSMUSG00000057113.14_33102511_33107048_1	chr11	-	661	5	ISM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	6158	224	6024	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2797	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	33107048	33102510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990
ENSMUSG00000057113.14_33102708_33110425_1	chr11	-	611	7	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	2647	-198	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1713	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTGTCCAGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	33110425	33102707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_33102853_33103985_33104061_33106002_33106098_33106663_33106748_33106990_33107049_33109933_33109996_33110333
ENSMUSG00000057113.14_33102768_33110894_1	chr11	-	640	8	ISM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	2312	481	2178	-258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTAATATCTGGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	33110894	33102767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827
ENSMUSG00000057113.14_33103985_33111225_1	chr11	-	703	8	ISM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	1981	1698	1847	942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2779	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGAATTTTCTGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	33111225	33103984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105
ENSMUSG00000057113.14_33105161_33109973_1	chr11	-	344	5	ISM	ENSMUSG00000057113.14	ENSMUST00000109354.10	1157	10	3104	234	3099	167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAGAAACAAATATAGTA	NA	NA	NA	NA	NA	NA	NA	NA	33109973	33105160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109933
ENSMUSG00000057113.14_33106026_33111226_1	chr11	-	603	7	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	1846	-698	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGCAAGCAAGTATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	33111226	33106025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110435_33110823_33110922_33111105
ENSMUSG00000057113.14_33106026_33111585_1	chr11	-	642	8	ISM	ENSMUSG00000057113.14	ENSMUST00000101375.5	966	10	1491	698	1487	-698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGCAAGCAAGTATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	33111585	33106025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547
ENSMUSG00000057113.14_33106663_33111628_1	chr11	-	601	7	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	1444	-1335	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTACCCAACAACAGACC	NA	NA	NA	NA	NA	NA	NA	NA	33111628	33106662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_33106748_33106990_33107049_33109933_33109996_33110333_33110435_33110827_33110922_33111105_33111226_33111547
ENSMUSG00000057113.14_33106728_33112963_1	chr11	-	583	8	ISM	ENSMUSG00000057113.14	ENSMUST00000101375.5	966	10	113	1400	109	-1400	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAATGCACAAAAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	33112963	33106727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ENSMUSG00000057113.14_33106991_33113077_1	chr11	-	677	7	ISM	ENSMUSG00000057113.14	ENSMUST00000101375.5	966	10	-1	1663	0	-1663	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1948	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTACATGAGATACTAT	NA	NA	NA	NA	NA	NA	NA	NA	33113077	33106990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ENSMUSG00000057113.14_33110334_33113206_1	chr11	-	686	5	ISM	ENSMUSG00000057113.14	ENSMUST00000101375.5	966	10	-130	5006	0	-5006	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1735	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAGAAAGGAAAGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	33113206	33110333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ENSMUSG00000057130.13_80250013_80267557_1	chr18	+	2562	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	3	1513	3	-1513	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGTCAGCCAGGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	80250012	80267557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
ENSMUSG00000057130.13_80250061_80267607_1	chr18	+	2564	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	51	1463	51	-1463	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGTATTGGGTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	80250060	80267607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
ENSMUSG00000057130.13_80250082_80267713_1	chr18	+	2649	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	72	1357	72	-1357	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTGCCACTTCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80250081	80267713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
ENSMUSG00000057130.13_80261951_80267893_1	chr18	+	2572	2	ISM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	11941	1177	11941	-1177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCAGGAACCACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	80261950	80267893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_80262023_80265393
ENSMUSG00000057130.13_80261996_80267954_1	chr18	+	2588	2	ISM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	11986	1116	11986	-1116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTCCCAGAGGCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	80261995	80267954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_80262023_80265393
ENSMUSG00000057135.13_70688838_70691630_1	chr11	-	159	2	FSM	ENSMUSG00000057135.13	ENST00000571800.5	164	2	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1880	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGGAGGGAGGGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	70691630	70688837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70688899_70691532
ENSMUSG00000057137.10_34840081_34851545_1	chr6	+	2278	2	FSM	ENSMUSG00000057137.10	ENSMUST00000074949.4	2614	2	0	336	0	-336	multi-exon	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACGAGGAACAGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	34840080	34851545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_34840276_34849462
ENSMUSG00000057147.14_114346901_114350261_1	chr2	-	1942	2	ISM	ENSMUSG00000057147.14	ENSMUST00000028640.14	2632	8	135173	4	135107	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTTTGTGTGAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	114350261	114346900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_114348774_114350192
ENSMUSG00000057147.14_114347125_114366067_1	chr2	-	1894	4	ISM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	119378	224	119301	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	114366067	114347124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005
ENSMUSG00000057147.14_114347430_114475266_1	chr2	-	1847	7	ISM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	10179	529	10102	-305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGGCCTAGATTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	114475266	114347429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201
ENSMUSG00000057147.14_114347664_114485368_1	chr2	-	1894	9	FSM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	77	763	0	-539	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTTTATGTTCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	114485368	114347663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
ENSMUSG00000057147.14_114347724_114485386_1	chr2	-	1852	9	FSM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	59	823	-18	-599	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTTTTAAAGAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	114485386	114347723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
ENSMUSG00000057147.14_114347781_114485438_1	chr2	-	1847	9	FSM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	7	880	-4	-656	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTCAACAGCATTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	114485438	114347780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
ENSMUSG00000057156.11_55094109_55095326_1	chr14	-	900	2	ISM	ENSMUSG00000057156.11	ENST00000673724.1	1404	3	6142	21	2621	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTTAGTGACTGTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	55095326	55094108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55094918_55095235
ENSMUSG00000057156.11_55094293_55095558_1	chr14	-	948	2	ISM	ENSMUSG00000057156.11	ENST00000673724.1	1404	3	5910	205	2389	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGCCAGCAGAAGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	55095558	55094292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55094918_55095235
ENSMUSG00000057156.11_55094365_55095592_1	chr14	-	910	2	ISM	ENSMUSG00000057156.11	ENST00000673724.1	1404	3	5876	277	2355	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCCTTAAACTGAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	55095592	55094364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55094918_55095235
ENSMUSG00000057156.11_55094547_55101422_1	chr14	-	899	3	FSM	ENSMUSG00000057156.11	ENST00000673724.1	1404	3	46	459	46	-459	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTCGGGACAATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	55101422	55094546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_55094918_55095235_55095739_55101397
ENSMUSG00000057156.11_55094852_55108418_1	chr14	-	967	2	FSM	ENSMUSG00000057156.11	ENST00000561013.2	1769	2	38	764	38	-764	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCACCTAGTAAGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	55108418	55094851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_55095739_55108338
ENSMUSG00000057173.9_39704619_39709563_1	chr1	-	333	2	ISM	ENSMUSG00000057173.9	ENST00000646446.1	1860	14	48136	156	48136	25	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAAGCAGGCTTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	39709563	39704618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_39704818_39709429
ENSMUSG00000057173.9_39704644_39760157_1	chr1	-	1587	12	NNC	ENSMUSG00000057173.9	novel	1613	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTGGTTTGCTGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	39760157	39704643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_39704818_39709429_39709744_39711345_39711461_39717816_39717912_39720001_39720159_39722068_39722128_39722759_39722911_39724654_39724769_39727756_39727811_39729250_39729362_39757578_39757702_39760037
ENSMUSG00000057173.9_39704644_39760157_2	chr1	-	1582	12	NNC	ENSMUSG00000057173.9	novel	1613	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTGGTTTGCTGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	39760157	39704643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_39704818_39709429_39709744_39711351_39711461_39717816_39717912_39720001_39720159_39722068_39722128_39722759_39722911_39724654_39724769_39727756_39727811_39729250_39729362_39757577_39757702_39760037
ENSMUSG00000057173.9_39704644_39760171_1	chr1	-	1597	12	NNC	ENSMUSG00000057173.9	novel	1613	12	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTGGTTTGCTGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	39760171	39704643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_39704818_39709429_39709744_39711345_39711456_39717816_39717912_39720001_39720159_39722068_39722128_39722759_39722911_39724654_39724769_39727756_39727811_39729250_39729362_39757577_39757702_39760037
ENSMUSG00000057173.9_39704644_39760171_2	chr1	-	1602	12	FSM	ENSMUSG00000057173.9	ENST00000646893.1	1613	12	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTGGTTTGCTGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	39760171	39704643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_39704818_39709429_39709744_39711345_39711461_39717816_39717912_39720001_39720159_39722068_39722128_39722759_39722911_39724654_39724769_39727756_39727811_39729250_39729362_39757577_39757702_39760037
ENSMUSG00000057173.9_39704644_39760171_3	chr1	-	1596	12	NNC	ENSMUSG00000057173.9	novel	1613	12	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTGGTTTGCTGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	39760171	39704643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_39704818_39709429_39709744_39711345_39711461_39717816_39717906_39720001_39720159_39722068_39722128_39722759_39722911_39724654_39724769_39727756_39727811_39729250_39729362_39757577_39757702_39760037
ENSMUSG00000057173.9_39704649_39709634_1	chr1	-	374	2	ISM	ENSMUSG00000057173.9	ENST00000646446.1	1860	14	48065	186	48065	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGCAAGGTGGTTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	39709634	39704648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_39704818_39709429
ENSMUSG00000057173.9_39709698_39720058_1	chr1	-	313	4	ISM	ENSMUSG00000057173.9	ENST00000646446.1	1860	14	37641	5235	37641	-5054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTGGAGTCATGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	39720058	39709697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_39709744_39711345_39711461_39717816_39717912_39720001
ENSMUSG00000057173.9_39724695_39757652_1	chr1	-	314	4	ISM	ENSMUSG00000057173.9	ENST00000428343.6	1649	11	47	20234	47	-20051	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCAGCTCTTAGGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	39757652	39724694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_39724769_39727756_39727811_39729250_39729362_39757577
ENSMUSG00000057173.9_39729285_39757648_1	chr1	-	361	5	ISM	ENSMUSG00000057173.9	ENST00000646446.1	1860	14	51	24822	51	-24641	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGAGCTGGCAAACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	39757648	39729284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_39729362_39735057_39735122_39749317_39749405_39750537_39750600_39757577
ENSMUSG00000057176.5_127181555_127187341_1	chr7	-	2110	9	FSM	ENSMUSG00000057176.5	ENSMUST00000072155.5	2536	9	426	0	426	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCATGCGTAGCATCAGG	NA	NA	NA	NA	NA	NA	NA	NA	127187341	127181554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_127182762_127183992_127184086_127184164_127184226_127184316_127184434_127184625_127184697_127185446_127185617_127185994_127186061_127186735_127186768_127187048
ENSMUSG00000057181.16_80253582_80258946_1	chr11	-	1426	3	ISM	ENSMUSG00000057181.16	ENSMUST00000179332.8	4536	10	9895	2264	9895	-2263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAAGGGTATACTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	80258946	80253581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_80254845_80255661_80255766_80258887
ENSMUSG00000057181.16_80253802_80261234_1	chr11	-	1427	5	ISM	ENSMUSG00000057181.16	ENSMUST00000179332.8	4536	10	7607	2484	7607	-2483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATGGTGGGCTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	80261234	80253801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156
ENSMUSG00000057181.16_80253991_80265012_1	chr11	-	1457	7	NNC	ENSMUSG00000057181.16	novel	4554	10	NA	NA	3829	-2672	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCACTTAAAAATGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	80265012	80253990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264518_80264887
ENSMUSG00000057182.16_65298480_65302688_1	chr2	-	462	4	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	94978	8028	94977	-8028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCGTTCTTCACTCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	65302688	65298479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_65298549_65299355_65299410_65300269_65300543_65302622
ENSMUSG00000057182.16_65300482_65313499_1	chr2	-	471	4	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	84167	10030	84166	-10030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTTCTGGTTAATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	65313499	65300481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_65300543_65302622_65302746_65312494_65312669_65313386
ENSMUSG00000057182.16_65302691_65314765_1	chr2	-	460	4	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	82901	12239	82900	-12239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATCCCTACGGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	65314765	65302690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_65302746_65312494_65312669_65313386_65313542_65314689
ENSMUSG00000057182.16_65312558_65325339_1	chr2	-	460	4	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	72327	22106	72326	-22106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTATGGATTTCAAACCTA	NA	NA	NA	NA	NA	NA	NA	NA	65325339	65312557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_65312669_65313386_65313542_65314689_65314811_65325266
ENSMUSG00000057182.16_65313486_65325575_1	chr2	-	486	3	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	72091	23034	72090	-23034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGGTGGAATCTTAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	65325575	65313485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_65313542_65314689_65314811_65325266
ENSMUSG00000057182.16_65325500_65327945_1	chr2	-	473	2	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	69721	35048	69720	-35048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTTGAAATAAGCAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	65327945	65325499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_65325741_65327713
ENSMUSG00000057182.16_65329346_65338872_1	chr2	-	478	4	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	58794	38894	58793	-38894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATCGCAATGGATCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	65338872	65329345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_65329385_65336360_65336600_65337490_65337624_65338805
ENSMUSG00000057182.16_65337495_65344943_1	chr2	-	458	3	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	52723	47043	52722	-47043	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGTAAGATGCAGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	65344943	65337494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_65337624_65338805_65339007_65344815
ENSMUSG00000057182.16_65337546_65345019_1	chr2	-	483	3	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	52647	47094	52646	-47094	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGGAGACAAAGAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	65345019	65337545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_65337624_65338805_65339007_65344815
ENSMUSG00000057182.16_65351291_65355128_1	chr2	-	470	4	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	42538	60839	42537	-60839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGTGGTGGCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	65355128	65351290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_65351374_65352135_65352278_65354489_65354554_65354947
ENSMUSG00000057182.16_65354956_65356958_1	chr2	-	475	3	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	40708	64504	40707	-64504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGACAGTAAGACTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	65356958	65354955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_65355221_65356220_65356313_65356840
ENSMUSG00000057182.16_65361186_65377581_1	chr2	-	458	3	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	20085	70734	20084	-70734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTTAGGAAAATTGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	65377581	65361185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_65361267_65366756_65367071_65377518
ENSMUSG00000057193.9_21232044_21256812_1	chr9	+	1160	13	ISM	ENSMUSG00000057193.9	ENSMUST00000217461.2	3478	22	50	9512	50	-8463	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGACCTTCTTCCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	21232043	21256812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774
ENSMUSG00000057193.9_21249736_21257289_1	chr9	+	1197	13	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	-3	7986	-3	-7986	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCGTCCCTGTGGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	21249735	21257289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204
ENSMUSG00000057193.9_21253119_21258098_1	chr9	+	1217	13	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	3380	7177	3380	-7177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCATGTTCTTCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	21253118	21258098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984
ENSMUSG00000057193.9_21253779_21258368_1	chr9	+	1116	11	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	4040	6907	4040	-6907	internal_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCATCGTGCAGATCATC	NA	NA	NA	NA	NA	NA	NA	NA	21253778	21258368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330
ENSMUSG00000057193.9_21254039_21259282_1	chr9	+	1193	10	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	4300	5993	4300	-5993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAACAGCAGGGCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	21254038	21259282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178
ENSMUSG00000057193.9_21254260_21259694_1	chr9	+	1214	11	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	4521	5581	4521	-5581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGATGCCACCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	21254259	21259694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623
ENSMUSG00000057193.9_21254431_21259922_1	chr9	+	1219	11	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	4692	5353	4692	-5353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCACCTTTGGGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	21254430	21259922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833
ENSMUSG00000057193.9_21256178_21265005_1	chr9	+	1169	12	ISM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	7054	1316	6439	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGAGAGGCCTTACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	21256177	21265005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ENSMUSG00000057193.9_21256628_21265147_1	chr9	+	1190	11	ISM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	7504	1174	6889	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCCCAGCTCATCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	21256627	21265147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ENSMUSG00000057193.9_21257205_21265274_1	chr9	+	1163	9	ISM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	8081	1047	7466	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCAGCCCTGGAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	21257204	21265274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ENSMUSG00000057193.9_21257983_21265375_1	chr9	+	1181	8	ISM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	8859	946	8244	100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAGGATGTCTGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	21257982	21265375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ENSMUSG00000057193.9_21258280_21265521_1	chr9	+	1113	7	ISM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	9156	800	8541	246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACCTAAGGGCCAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	21258279	21265521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ENSMUSG00000057193.9_21258280_21265606_1	chr9	+	1198	7	ISM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	9156	715	8541	331	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGCTCCAGAACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	21258279	21265606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ENSMUSG00000057193.9_21259216_21265761_1	chr9	+	1170	6	ISM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	10092	560	9477	486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAACGATTGGTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	21259215	21265761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ENSMUSG00000057193.9_21263774_21266048_1	chr9	+	1145	2	ISM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	14650	273	14035	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTGAAACTAGAGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	21263773	21266048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21263848_21264977
ENSMUSG00000057193.9_21263800_21266129_1	chr9	+	1200	2	ISM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	14676	192	14061	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGGCCCGCCCCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	21263799	21266129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_21263848_21264977
ENSMUSG00000057219.12_115366780_115379916_1	chr11	+	532	3	FSM	ENSMUSG00000057219.12	ENST00000581078.1	561	3	33	-4	33	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTGCCACAGGTATAGG	NA	NA	NA	NA	NA	NA	NA	NA	115366779	115379916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115366854_115366947_115367028_115379538
ENSMUSG00000057219.12_115366946_115379916_1	chr11	+	459	2	NNC	ENSMUSG00000057219.12	novel	561	3	NA	NA	199	4	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTGCCACAGGTATAGG	NA	NA	NA	NA	NA	NA	NA	NA	115366945	115379916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_115367028_115379539
ENSMUSG00000057219.12_115367008_115380382_1	chr11	+	928	2	ISM	ENSMUSG00000057219.12	ENSMUST00000035240.7	2260	3	515	911	261	470	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGGCGCCCTAAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	115367007	115380382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_115367092_115379538
ENSMUSG00000057229.12_25321768_25324976_1	chr7	+	1222	4	ISM	ENSMUSG00000057229.12	ENSMUST00000085953.5	2387	6	2850	-3	-41	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGCCTTTCCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	25321767	25324976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_25321850_25323223_25323364_25323451_25323615_25324139
ENSMUSG00000057229.12_25323224_25324199_1	chr7	+	200	2	ISM	ENSMUSG00000057229.12	ENST00000589970.5	369	3	1415	128	1415	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTGGTGGAAGAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	25323223	25324199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_25323364_25324139
ENSMUSG00000057234.10_108922645_108967761_1	chr2	-	1253	3	ISM	ENSMUSG00000057234.10	ENSMUST00000081631.10	1894	6	140874	3	140874	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	108967761	108922644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_108923643_108961829_108962009_108967685
ENSMUSG00000057234.10_108922862_109021952_1	chr2	-	1208	4	ISM	ENSMUSG00000057234.10	ENSMUST00000081631.10	1894	6	86683	220	86683	-220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGAAAGGAAGCATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	109021952	108922861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896
ENSMUSG00000057234.10_108922921_109022007_1	chr2	-	1204	4	ISM	ENSMUSG00000057234.10	ENSMUST00000081631.10	1894	6	86628	279	86628	-279	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAGTGAGTTCATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	109022007	108922920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896
ENSMUSG00000057234.10_108923000_109022033_1	chr2	-	1151	4	ISM	ENSMUSG00000057234.10	ENSMUST00000081631.10	1894	6	86602	358	86602	202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAGCTTTATCAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	109022033	108922999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896
ENSMUSG00000057234.10_108923202_109022035_1	chr2	-	907	4	ISM	ENSMUSG00000057234.10	ENST00000406787.7	1617	7	89049	0	86600	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATCTTATTATTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	109022035	108923201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_108923643_108961829_108961965_108967685_108967878_109021896
ENSMUSG00000057234.10_108923287_109108625_1	chr2	-	1239	6	FSM	ENSMUSG00000057234.10	ENSMUST00000081631.10	1894	6	10	645	10	-85	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGGTACTTACTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	109108625	108923286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896_109022034_109104733_109105021_109108537
ENSMUSG00000057234.10_108923356_109104800_1	chr2	-	818	5	ISM	ENSMUSG00000057234.10	ENST00000406787.7	1617	7	6284	154	3835	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATTCAGATCAGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	109104800	108923355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_108923643_108961829_108961965_108967685_108967878_109021896_109022034_109104733
ENSMUSG00000057234.10_108923489_109104944_1	chr2	-	829	5	ISM	ENSMUSG00000057234.10	ENST00000406787.7	1617	7	6140	287	3691	-287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGGTCGCCTGGTCG	NA	NA	NA	NA	NA	NA	NA	NA	109104944	108923488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_108923643_108961829_108961965_108967685_108967878_109021896_109022034_109104733
ENSMUSG00000057234.10_108923546_109104997_1	chr2	-	825	5	ISM	ENSMUSG00000057234.10	ENST00000406787.7	1617	7	6087	344	3638	-344	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAATGAGCTCAATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	109104997	108923545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_108923643_108961829_108961965_108967685_108967878_109021896_109022034_109104733
ENSMUSG00000057234.10_108961917_109108625_1	chr2	-	752	5	ISM	ENSMUSG00000057234.10	ENST00000406787.7	1617	7	2459	38715	10	-38715	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCCAAAAAAATTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	109108625	108961916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_108961965_108967685_108967878_109021896_109022034_109104733_109105021_109108537
ENSMUSG00000057234.10_108967743_109110937_1	chr2	-	837	5	ISM	ENSMUSG00000057234.10	ENST00000406787.7	1617	7	147	44541	147	-44541	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGGTTTCTCCCTTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	109110937	108967742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_108967878_109021896_109022034_109104733_109105021_109108537_109108763_109110884
ENSMUSG00000057234.10_108967798_109111047_1	chr2	-	892	5	ISM	ENSMUSG00000057234.10	ENST00000406787.7	1617	7	37	44596	37	-44596	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGGAATCCTTATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	109111047	108967797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_108967878_109021896_109022034_109104733_109105021_109108537_109108763_109110884
ENSMUSG00000057236.11_129202413_129211467_1	chr4	-	1565	2	ISM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	17696	1520	17696	-1520	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTTGGGGCTATATATAA	NA	NA	NA	NA	NA	NA	NA	NA	129211467	129202412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129203951_129211440
ENSMUSG00000057236.11_129202763_129215675_1	chr4	-	1541	6	ISM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	13488	1870	13488	-1870	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGATCTGAAGTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	129215675	129202762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646
ENSMUSG00000057236.11_129202872_129215886_1	chr4	-	1545	7	ISM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	13277	1979	13277	-1979	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	129215886	129202871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871
ENSMUSG00000057236.11_129202925_129215936_1	chr4	-	1542	7	ISM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	13227	2032	13227	-2032	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTAAGAGTCAGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	129215936	129202924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871
ENSMUSG00000057236.11_129202958_129216006_1	chr4	-	1579	7	ISM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	13157	2065	13157	-2065	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTCATTGGAACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	129216006	129202957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871
ENSMUSG00000057236.11_129203057_129216209_1	chr4	-	1570	8	ISM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	12954	2164	12954	-2164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCCAAGAATCTCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	129216209	129203056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145
ENSMUSG00000057236.11_129203310_129216662_1	chr4	-	1543	9	ISM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	12501	2417	12501	-2417	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCATGCTGGTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	129216662	129203309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488
ENSMUSG00000057236.11_129203502_129228437_1	chr4	-	1645	11	ISM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	726	2609	726	-2609	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATTGCTAGTTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	129228437	129203501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289
ENSMUSG00000057236.11_129203641_129229046_1	chr4	-	1542	12	FSM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	117	2748	117	-2748	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTCCTTCCTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	129229046	129203640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ENSMUSG00000057236.11_129203684_129229163_1	chr4	-	1616	12	FSM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	0	2791	0	-2791	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGCTGGGTAGCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	129229163	129203683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ENSMUSG00000057278.9_86348286_86356310_1	chr6	+	1041	3	NNC	ENSMUSG00000057278.9	novel	1055	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCAGCAGGCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	86348285	86356310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_86348606_86353476_86353602_86355714
ENSMUSG00000057280.16_58285962_58367480_1	chr4	+	1793	11	NIC	ENSMUSG00000057280.16	novel	3348	14	NA	NA	0	-6307	combination_of_known_junctions	FALSE	non_canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTCCTTCTGAATCCTA	NA	NA	NA	NA	NA	NA	NA	NA	58285961	58367480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_58286191_58293491_58293619_58296607_58296760_58301601_58301730_58303844_58303987_58333564_58333690_58344151_58344319_58353943_58354208_58355680_58355857_58366797_58366997_58367396
ENSMUSG00000057280.16_58285962_58373787_1	chr4	+	2830	14	NIC	ENSMUSG00000057280.16	novel	3352	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAAGACCAGATAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	58285961	58373787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_58286191_58293491_58293619_58296607_58296760_58301601_58301730_58303844_58303987_58327325_58327356_58333564_58333690_58344151_58344312_58353943_58354208_58355680_58355857_58366797_58366997_58367396_58367589_58368872_58369022_58373030
ENSMUSG00000057280.16_58293513_58368975_1	chr4	+	1754	11	NIC	ENSMUSG00000057280.16	novel	3348	14	NA	NA	7548	-4812	combination_of_known_junctions	FALSE	non_canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCATGGCAGAGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	58293512	58368975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_58293619_58296607_58296760_58301601_58301730_58303844_58303987_58333564_58333690_58344151_58344319_58353943_58354208_58355680_58355857_58366797_58366997_58367396_58367589_58368872
ENSMUSG00000057280.16_58293532_58373966_1	chr4	+	2740	13	NIC	ENSMUSG00000057280.16	novel	3352	15	NA	NA	7567	179	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATTGCATAATAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	58293531	58373966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_58293619_58296607_58296760_58301601_58301730_58303844_58303987_58327325_58327356_58333564_58333690_58344151_58344312_58353943_58354208_58355680_58355857_58366797_58366997_58367396_58367589_58368872_58369022_58373030
ENSMUSG00000057280.16_58293592_58374038_1	chr4	+	2752	13	NIC	ENSMUSG00000057280.16	novel	3352	15	NA	NA	7627	251	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATCCAAAACTGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	58293591	58374038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_58293619_58296607_58296760_58301601_58301730_58303844_58303987_58327325_58327356_58333564_58333690_58344151_58344312_58353943_58354208_58355680_58355857_58366797_58366997_58367396_58367589_58368872_58369022_58373030
ENSMUSG00000057280.16_58296614_58373046_1	chr4	+	1704	11	NIC	ENSMUSG00000057280.16	novel	3348	14	NA	NA	10649	-741	combination_of_known_junctions	FALSE	non_canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCGATGTGTCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	58296613	58373046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_58296760_58301601_58301730_58303844_58303987_58333564_58333690_58344151_58344319_58353943_58354208_58355680_58355857_58366797_58366997_58367396_58367589_58368872_58369022_58373030
ENSMUSG00000057280.16_58296666_58373101_1	chr4	+	1707	11	NIC	ENSMUSG00000057280.16	novel	3348	14	NA	NA	10701	-686	combination_of_known_junctions	FALSE	non_canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGAAGTATGTCCCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	58296665	58373101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_58296760_58301601_58301730_58303844_58303987_58333564_58333690_58344151_58344319_58353943_58354208_58355680_58355857_58366797_58366997_58367396_58367589_58368872_58369022_58373030
ENSMUSG00000057280.16_58296710_58373160_1	chr4	+	1722	11	NIC	ENSMUSG00000057280.16	novel	3348	14	NA	NA	10745	-627	combination_of_known_junctions	FALSE	non_canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGGGTGTCTAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	58296709	58373160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_58296760_58301601_58301730_58303844_58303987_58333564_58333690_58344151_58344319_58353943_58354208_58355680_58355857_58366797_58366997_58367396_58367589_58368872_58369022_58373030
ENSMUSG00000057280.16_58296713_58374150_1	chr4	+	2732	12	NIC	ENSMUSG00000057280.16	novel	3352	15	NA	NA	10748	-152	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCCTTCTTCCACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	58296712	58374150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_58296760_58301601_58301730_58303844_58303987_58327325_58327356_58333564_58333690_58344151_58344312_58353943_58354208_58355680_58355857_58366797_58366997_58367396_58367589_58368872_58369022_58373030
ENSMUSG00000057280.16_58301602_58374303_1	chr4	+	2838	11	NIC	ENSMUSG00000057280.16	novel	3422	16	NA	NA	15637	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTGTGCTGACTGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	58301601	58374303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_58301730_58303844_58303987_58327325_58327356_58333564_58333690_58344151_58344312_58353943_58354208_58355680_58355857_58366797_58366997_58367396_58367589_58368872_58369022_58373030
ENSMUSG00000057280.16_58301704_58373299_1	chr4	+	1709	10	NIC	ENSMUSG00000057280.16	novel	3348	14	NA	NA	15739	-488	combination_of_known_junctions	FALSE	non_canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGGAGACCATGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	58301703	58373299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_58301730_58303844_58303987_58333564_58333690_58344151_58344319_58353943_58354208_58355680_58355857_58366797_58366997_58367396_58367589_58368872_58369022_58373030
ENSMUSG00000057280.16_58303866_58367508_1	chr4	+	1188	8	ISM	ENSMUSG00000057280.16	ENSMUST00000081919.12	3348	14	17906	6794	17901	-6279	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGAGTATCCGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	58303865	58367508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_58303987_58333564_58333690_58344151_58344319_58353943_58354208_58355680_58355857_58356481_58356506_58366797_58366997_58367396
ENSMUSG00000057322.13_114559374_114563157_2	chr11	+	338	5	NNC	ENSMUSG00000057322.13	novel	371	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	114559373	114563157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_114559436_114559606_114559641_114559731_114559793_114562559_114562683_114563099
ENSMUSG00000057322.13_114559374_114563157_3	chr11	+	339	5	NNC	ENSMUSG00000057322.13	novel	371	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	114559373	114563157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_114559436_114559606_114559641_114559731_114559793_114562567_114562683_114563090
ENSMUSG00000057335.12_176563151_176577596_1	chr1	-	1005	7	FSM	ENSMUSG00000057335.12	ENST00000490813.5	1032	7	22	5	22	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATCTTGTTATCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	176577596	176563150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570117_176570215_176577491
ENSMUSG00000057335.12_176563151_176577596_2	chr1	-	999	7	NNC	ENSMUSG00000057335.12	novel	1032	7	NA	NA	22	-5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATCTTGTTATCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	176577596	176563150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570117_176570209_176577491
ENSMUSG00000057363.13_43788672_43866924_1	chr1	-	2053	15	FSM	ENSMUSG00000057363.13	ENST00000283148.12	2033	15	0	-20	0	20	multi-exon	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGATTGACATCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	43866924	43788671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844850_43846509_43846538_43866774
ENSMUSG00000057363.13_43788672_43866924_2	chr1	-	2041	14	NNC	ENSMUSG00000057363.13	novel	2033	15	NA	NA	0	20	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGATTGACATCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	43866924	43788671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844858_43866766
ENSMUSG00000057363.13_43788672_43866924_3	chr1	-	2051	14	NNC	ENSMUSG00000057363.13	novel	2033	15	NA	NA	0	20	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGATTGACATCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	43866924	43788671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844876_43866774
ENSMUSG00000057367.13_7818394_7833676_1	chr9	-	1393	7	FSM	ENSMUSG00000057367.13	ENSMUST00000074246.7	3130	7	1580	157	659	-157	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTTTCTGGAAAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	7833676	7818393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505
ENSMUSG00000057367.13_7818528_7833754_1	chr9	-	1337	7	FSM	ENSMUSG00000057367.13	ENSMUST00000074246.7	3130	7	1502	291	581	227	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTATGTCCTTCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	7833754	7818527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505
ENSMUSG00000057367.13_7818610_7833836_1	chr9	-	1337	7	FSM	ENSMUSG00000057367.13	ENSMUST00000074246.7	3130	7	1420	373	499	145	multi-exon	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCTTAGTCTGTTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	7833836	7818609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505
ENSMUSG00000057367.13_7819432_7834356_1	chr9	-	1356	5	ISM	ENSMUSG00000057367.13	ENSMUST00000074246.7	3130	7	900	1195	-21	-677	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGATACCCTTACAAGC	NA	NA	NA	NA	NA	NA	NA	NA	7834356	7819431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505
ENSMUSG00000057367.13_7819494_7834399_1	chr9	-	1337	5	ISM	ENSMUSG00000057367.13	ENSMUST00000074246.7	3130	7	857	1257	-64	-739	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATAATCTTCTTGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	7834399	7819493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505
ENSMUSG00000057367.13_7821075_7834584_1	chr9	-	1353	4	ISM	ENSMUSG00000057367.13	ENSMUST00000074246.7	3130	7	672	2838	-249	-2320	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTACAGGACCGTCAATGA	NA	NA	NA	NA	NA	NA	NA	NA	7834584	7821074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_7821221_7825615_7825665_7826931_7827011_7833505
ENSMUSG00000057367.13_7821139_7834639_1	chr9	-	1344	4	ISM	ENSMUSG00000057367.13	ENSMUST00000074246.7	3130	7	617	2902	-304	-2384	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGCTTCAGTAGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	7834639	7821138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_7821221_7825615_7825665_7826931_7827011_7833505
ENSMUSG00000057375.14_107171560_107201875_1	chr4	+	797	7	ISM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	0	15144	0	-15144	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACCATGCGGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	107171559	107201875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708
ENSMUSG00000057375.14_107172960_107202264_1	chr4	+	756	7	ISM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	1400	14755	1400	-14755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTCAGGCTCTGTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	107172959	107202264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205
ENSMUSG00000057375.14_107176168_107202388_1	chr4	+	771	6	ISM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	4608	14631	4608	-14631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTCTTGACGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	107176167	107202388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205
ENSMUSG00000057375.14_107176283_107207669_1	chr4	+	715	7	ISM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	4723	9350	4723	-9350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGACAGTAACAGCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	107176282	107207669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610
ENSMUSG00000057375.14_107193309_107207735_1	chr4	+	763	6	ISM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	21749	9284	21749	-9284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTCACAAATAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	107193308	107207735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610
ENSMUSG00000057375.14_107193631_107216862_1	chr4	+	742	6	ISM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	22071	157	22071	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGCCAGCATCAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	107193630	107216862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
ENSMUSG00000057375.14_107201751_107217020_1	chr4	+	650	4	ISM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	30191	-1	30191	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCTTCAGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	107201750	107217020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_107201876_107202205_107202389_107207610_107207736_107216803
ENSMUSG00000057388.10_13130236_13134956_1	chr17	-	943	4	FSM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	276	0	276	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTTACTGTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	13134956	13130235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_13130637_13132656_13132889_13134524_13134712_13134833
ENSMUSG00000057388.10_13130489_13135232_1	chr17	-	966	4	FSM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	0	253	0	-253	multi-exon	FALSE	canonical	NA	NA	NA	NA	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGAAGAAAGGAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	13135232	13130488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_13130637_13132656_13132889_13134524_13134712_13134833
ENSMUSG00000057388.10_13130522_13135232_1	chr17	-	933	4	FSM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	0	286	0	-286	multi-exon	FALSE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTACAGCCACCAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	13135232	13130521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_13130637_13132656_13132889_13134524_13134712_13134833
ENSMUSG00000057411.10_26009474_26011051_1	chr17	-	601	5	FSM	ENSMUSG00000057411.10	ENSMUST00000072735.9	1321	5	721	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTTTGTTCCAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	26011051	26009473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011026
ENSMUSG00000057411.10_26009474_26011241_1	chr17	-	791	5	FSM	ENSMUSG00000057411.10	ENSMUST00000072735.9	1321	5	531	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTTTGTTCCAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	26011241	26009473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011026
ENSMUSG00000057411.10_26009663_26011347_2	chr17	-	708	5	FSM	ENSMUSG00000057411.10	ENSMUST00000072735.9	1321	5	425	188	14	-178	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGGTGGGCGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	26011347	26009662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011026
ENSMUSG00000057411.10_26010360_26011503_1	chr17	-	683	3	ISM	ENSMUSG00000057411.10	ENSMUST00000072735.9	1321	5	269	885	-142	-875	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCGAGTGTCTGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	26011503	26010359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26010461_26010545_26010651_26011026
ENSMUSG00000057411.10_26010397_26011569_1	chr17	-	712	3	ISM	ENSMUSG00000057411.10	ENSMUST00000072735.9	1321	5	203	922	203	-912	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTTGCACGGCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	26011569	26010396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26010461_26010545_26010651_26011026
ENSMUSG00000057411.10_26010544_26011612_1	chr17	-	693	2	ISM	ENSMUSG00000057411.10	ENSMUST00000072735.9	1321	5	160	1069	160	-1059	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCTGTGTCTATATATT	NA	NA	NA	NA	NA	NA	NA	NA	26011612	26010543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26010651_26011026
ENSMUSG00000057421.13_94978941_94990071_1	chrX	-	1171	4	ISM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	10448	0	10448	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCATGGTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	94990071	94978940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016
ENSMUSG00000057421.13_94979123_94990514_1	chrX	-	1124	5	ISM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	10005	182	10005	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTGATGCCAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	94990514	94979122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472
ENSMUSG00000057421.13_94979195_94990563_1	chrX	-	1101	5	ISM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	9956	254	9956	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGAGGGCCTTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	94990563	94979194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472
ENSMUSG00000057421.13_94980978_94990679_1	chrX	-	1156	4	ISM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	9840	2037	9840	-2037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACCTGTGGCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	94990679	94980977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_94981129_94983904_94984555_94990016_94990165_94990472
ENSMUSG00000057421.13_94981092_94991425_1	chrX	-	1092	5	ISM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	9094	2151	9094	-2151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGCCAGACTGAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	94991425	94981091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375
ENSMUSG00000057421.13_94984042_94994947_1	chrX	-	1096	6	ISM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	5572	5101	5572	-5101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATGATGATGAAGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	94994947	94984041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915
ENSMUSG00000057421.13_94984297_94995795_1	chrX	-	1138	7	ISM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	4724	5356	4724	-5356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGGAGAATGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	94995795	94984296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513
ENSMUSG00000057421.13_94984430_94998817_1	chrX	-	1157	9	ISM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	1702	5489	1702	-5489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCACTGGCAAAGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	94998817	94984429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747
ENSMUSG00000057421.13_94990028_95000294_1	chrX	-	1178	10	ISM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	225	11087	225	-11087	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTCAGGTGTAAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	95000294	94990027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ENSMUSG00000057421.13_94990543_95000492_1	chrX	-	1169	9	ISM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	27	11602	27	-11602	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTGGGATCCGGCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	95000492	94990542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ENSMUSG00000057455.13_31108114_31286853_1	chr18	-	588	2	ISM	ENSMUSG00000057455.13	ENST00000589109.5	1175	5	163317	83	163272	-83	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGATTTTGTCAATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	31286853	31108113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_31108558_31286709
ENSMUSG00000057455.13_31108336_31449956_1	chr18	-	656	5	FSM	ENSMUSG00000057455.13	ENST00000589109.5	1175	5	214	305	169	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGGCTTTGCTTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	31449956	31108335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_31108558_31286709_31286950_31345710_31345785_31376173_31376231_31449893
ENSMUSG00000057455.13_31108336_31449956_2	chr18	-	662	6	FSM	ENSMUSG00000057455.13	ENST00000590910.1	831	6	169	0	169	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGGCTTTGCTTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	31449956	31108335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_31108558_31286757_31286950_31317902_31317957_31345710_31345785_31376173_31376231_31449893
ENSMUSG00000057455.13_31108461_31450049_1	chr18	-	624	5	FSM	ENSMUSG00000057455.13	ENST00000589109.5	1175	5	121	430	76	-125	multi-exon	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCTTAGTGAGAGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	31450049	31108460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_31108558_31286709_31286950_31345710_31345785_31376173_31376231_31449893
ENSMUSG00000057455.13_31108461_31450049_2	chr18	-	630	6	FSM	ENSMUSG00000057455.13	ENST00000590910.1	831	6	76	125	76	-125	multi-exon	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCTTAGTGAGAGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	31450049	31108460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_31108558_31286757_31286950_31317902_31317957_31345710_31345785_31376173_31376231_31449893
ENSMUSG00000057455.13_31108517_31450164_1	chr18	-	683	5	FSM	ENSMUSG00000057455.13	ENST00000589109.5	1175	5	6	486	0	-181	multi-exon	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCTTCTTTGAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	31450164	31108516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_31108558_31286709_31286950_31345710_31345785_31376173_31376231_31449893
ENSMUSG00000057455.13_31108517_31450164_2	chr18	-	689	6	FSM	ENSMUSG00000057455.13	ENST00000590910.1	831	6	-39	181	0	-181	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCTTCTTTGAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	31450164	31108516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_31108558_31286757_31286950_31317902_31317957_31345710_31345785_31376173_31376231_31449893
ENSMUSG00000057455.13_31286708_31450164_1	chr18	-	644	4	ISM	ENSMUSG00000057455.13	ENST00000589109.5	1175	5	6	178677	0	52411	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATACATAGTATCAAATATG	NA	NA	NA	NA	NA	NA	NA	NA	31450164	31286707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_31286950_31345710_31345785_31376173_31376231_31449893
ENSMUSG00000057469.9_16861290_16870298_1	chr12	+	292	4	ISM	ENSMUSG00000057469.9	ENST00000428850.2	497	5	2	1911	2	-1911	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGCCATGGAAGACGCCT	NA	NA	NA	NA	NA	NA	NA	NA	16861289	16870298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_16861317_16866400_16866456_16868917_16869059_16870229
ENSMUSG00000057469.9_16866400_16870301_1	chr12	+	269	3	ISM	ENSMUSG00000057469.9	ENST00000428850.2	497	5	5112	1908	5112	-1908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCATGGAAGACGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	16866399	16870301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_16866456_16868917_16869059_16870229
ENSMUSG00000057469.9_16868980_16872154_1	chr12	+	296	3	ISM	ENSMUSG00000057469.9	ENST00000428850.2	497	5	7692	55	7692	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCAGTGAAGGCTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	16868979	16872154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_16869059_16870229_16870386_16872093
ENSMUSG00000057469.9_16868993_16872154_1	chr12	+	281	3	NNC	ENSMUSG00000057469.9	novel	497	5	NA	NA	7705	-55	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCAGTGAAGGCTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	16868992	16872154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_16869059_16870229_16870389_16872098
ENSMUSG00000057469.9_16870262_16872209_1	chr12	+	230	2	NNC	ENSMUSG00000057469.9	novel	497	5	NA	NA	8974	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTAGCGCTGCACTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	16870261	16872209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_16870391_16872108
ENSMUSG00000057469.9_16872124_16875726_1	chr12	+	594	3	ISM	ENSMUSG00000057469.9	ENSMUST00000020908.9	2418	7	11146	1027	10836	-1027	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGGACAGCTGGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	16872123	16875726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_16872209_16874570_16874719_16875365
ENSMUSG00000057497.9_86342628_86347040_1	chr6	+	1636	3	NNC	ENSMUSG00000057497.9	novel	1643	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTCTTATGGGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	86342627	86347040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_86342802_86343591_86343726_86345712
ENSMUSG00000057506.6_44127698_44134410_1	chr19	-	711	4	ISM	ENSMUSG00000057506.6	ENSMUST00000079033.6	885	5	475	0	472	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAACAAATGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	44134410	44127697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44128153_44130562_44130668_44131459_44131580_44134379
ENSMUSG00000057506.6_44127806_44134479_1	chr19	-	672	4	ISM	ENSMUSG00000057506.6	ENSMUST00000079033.6	885	5	406	108	403	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGGGCATTTAGCACGT	NA	NA	NA	NA	NA	NA	NA	NA	44134479	44127805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44128153_44130562_44130668_44131459_44131580_44134379
ENSMUSG00000057506.6_44127908_44134838_1	chr19	-	628	5	FSM	ENSMUSG00000057506.6	ENSMUST00000079033.6	885	5	47	210	44	-210	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTACTTGAATGCTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	44134838	44127907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_44128153_44130562_44130668_44131459_44131580_44134379_44134497_44134797
ENSMUSG00000057522.16_95304924_95383848_1	chr11	+	2479	11	FSM	ENSMUSG00000057522.16	ENSMUST00000107724.9	2881	11	18	384	0	-384	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTGGTCTTTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	95304923	95383848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ENSMUSG00000057522.16_95304924_95384232_1	chr11	+	3058	10	NNC	ENSMUSG00000057522.16	novel	3063	10	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCTGTCATTGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	95304923	95384232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365434_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ENSMUSG00000057522.16_95305069_95384232_1	chr11	+	2913	10	NNC	ENSMUSG00000057522.16	novel	3063	10	NA	NA	145	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCTGTCATTGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	95305068	95384232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365434_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ENSMUSG00000057522.16_95305069_95384232_2	chr11	+	2911	10	NNC	ENSMUSG00000057522.16	novel	3063	10	NA	NA	145	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1550	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCTGTCATTGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	95305068	95384232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_95305231_95361354_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ENSMUSG00000057530.15_137589608_137653611_1	chr4	+	482	5	ISM	ENSMUSG00000057530.15	ENSMUST00000102518.10	4816	20	60	38929	60	-38929	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCAGGACTTCTTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	137589607	137653611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137589693_137632380_137632467_137641078_137641166_137648331_137648474_137653529
ENSMUSG00000057530.15_137653683_137666011_1	chr4	+	472	5	ISM	ENSMUSG00000057530.15	ENSMUST00000102518.10	4816	20	64135	26529	64135	-26529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATGCAGCAGATCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	137653682	137666011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934
ENSMUSG00000057530.15_137663999_137672442_1	chr4	+	490	4	ISM	ENSMUSG00000057530.15	ENSMUST00000102518.10	4816	20	74451	20098	74451	-20098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCTCATCAACAACACC	NA	NA	NA	NA	NA	NA	NA	NA	137663998	137672442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137664116_137664649_137664716_137665934_137666127_137672327
ENSMUSG00000057530.15_137665974_137675925_1	chr4	+	482	4	ISM	ENSMUSG00000057530.15	ENSMUST00000102518.10	4816	20	76426	16615	76426	-16615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAAAGCAACCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	137665973	137675925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137666127_137672327_137672471_137673565_137673681_137675854
ENSMUSG00000057530.15_137673581_137678893_1	chr4	+	473	5	ISM	ENSMUSG00000057530.15	ENSMUST00000102518.10	4816	20	84033	13647	84033	-13647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTCCCAACAGAGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	137673580	137678893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808
ENSMUSG00000057530.15_137676778_137685358_1	chr4	+	489	6	ISM	ENSMUSG00000057530.15	ENSMUST00000102518.10	4816	20	87230	7182	87230	-7182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGTGGAGGCGTTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	137676777	137685358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309
ENSMUSG00000057530.15_137685317_137690244_1	chr4	+	484	3	ISM	ENSMUSG00000057530.15	ENSMUST00000102518.10	4816	20	95769	2296	95769	-2296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGGAAGGAGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	137685316	137690244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_137685501_137688953_137689050_137690040
ENSMUSG00000057531.15_45076633_45136351_1	chr13	-	587	4	NNC	ENSMUSG00000057531.15	novel	726	6	NA	NA	18959	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1770	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGGGTAAGAGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	45136351	45076632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_45076769_45084472_45084628_45123493_45123655_45136216
ENSMUSG00000057531.15_45076690_45147215_1	chr13	-	696	7	ISM	ENSMUSG00000057531.15	ENST00000338950.9	831	8	8256	57	8095	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2824	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCTCTCGATGTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	45147215	45076689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_45076769_45084471_45084628_45123493_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160
ENSMUSG00000057531.15_45076690_45147215_2	chr13	-	645	6	ISM	ENSMUSG00000057531.15	ENST00000355917.7	780	7	8256	57	8095	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1775	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCTCTCGATGTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	45147215	45076689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_45076769_45084471_45084628_45123493_45123655_45136216_45136350_45139510_45139572_45147160
ENSMUSG00000057541.15_23946715_23952874_1	chr5	-	667	5	ISM	ENSMUSG00000057541.15	ENSMUST00000131992.8	3645	16	31682	1061	31682	-1061	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTTTAATCAGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	23952874	23946714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791
ENSMUSG00000057541.15_23951425_23959574_1	chr5	-	696	6	ISM	ENSMUSG00000057541.15	ENSMUST00000131992.8	3645	16	24982	5771	24982	-5771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGTTCCATGTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	23959574	23951424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455
ENSMUSG00000057541.15_23952874_23967459_1	chr5	-	700	7	ISM	ENSMUSG00000057541.15	ENSMUST00000131992.8	3645	16	17097	7220	17097	-7220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGTGGAACACCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	23967459	23952873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360
ENSMUSG00000057541.15_23957328_23980940_1	chr5	-	683	7	ISM	ENSMUSG00000057541.15	ENSMUST00000131992.8	3645	16	3616	11674	3616	-11674	internal_fragment	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCATTAACTACTATGG	NA	NA	NA	NA	NA	NA	NA	NA	23980940	23957327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881
ENSMUSG00000057541.15_23959514_23983146_1	chr5	-	669	7	ISM	ENSMUSG00000057541.15	ENSMUST00000131992.8	3645	16	1410	13860	1410	-13860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACCCCTCTGAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	23983146	23959513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070
ENSMUSG00000057541.15_23973808_23983470_1	chr5	-	690	4	ISM	ENSMUSG00000057541.15	ENSMUST00000131992.8	3645	16	1086	28154	1086	-28154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCGTAGCCTACCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	23983470	23973807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_23973911_23980666_23980769_23980881_23980967_23983070
ENSMUSG00000057541.15_23973882_23983497_1	chr5	-	643	4	ISM	ENSMUSG00000057541.15	ENSMUST00000131992.8	3645	16	1059	28228	1059	-28228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCATCCATCAAGCCATTA	NA	NA	NA	NA	NA	NA	NA	NA	23983497	23973881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_23973911_23980666_23980769_23980881_23980967_23983070
ENSMUSG00000057551.11_19552520_19558505_1	chr9	+	985	6	FSM	ENSMUSG00000057551.11	ENSMUST00000079042.7	1824	6	0	839	0	-839	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGGAGAAAGGCCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	19552519	19558505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ENSMUSG00000057554.14_12454305_12476376_1	chr13	-	2723	9	NNC	ENSMUSG00000057554.14	novel	2736	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGAATGAATACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	12476376	12454304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_12455876_12462027_12462194_12463299_12463389_12467580_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476121
ENSMUSG00000057554.14_12454851_12476410_1	chr13	-	2030	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099821.10	2792	10	209	553	-23	-546	multi-exon	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCAGCGAGGTCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	12476410	12454850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476307
ENSMUSG00000057554.14_12454941_12476505_1	chr13	-	2035	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099821.10	2792	10	114	643	114	631	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAAAGCAAACCCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	12476505	12454940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476307
ENSMUSG00000057554.14_12455620_12469675_1	chr13	-	868	6	NNC	ENSMUSG00000057554.14	novel	1193	8	NA	NA	4462	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1637	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCAACATCAAGTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	12469675	12455619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_12455876_12462027_12462194_12463299_12463389_12465739_12465913_12468161_12468286_12469615
ENSMUSG00000057554.14_12455620_12469675_2	chr13	-	870	6	ISM	ENSMUSG00000057554.14	ENST00000352231.6	1193	8	4462	0	4462	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCAACATCAAGTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	12469675	12455619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_12455876_12462027_12462194_12463299_12463389_12465739_12465915_12468161_12468286_12469615
ENSMUSG00000057554.14_12455620_12469766_1	chr13	-	961	6	ISM	ENSMUSG00000057554.14	ENST00000352231.6	1193	8	4371	0	4371	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCAACATCAAGTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	12469766	12455619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_12455876_12462027_12462194_12463299_12463389_12465739_12465915_12468161_12468286_12469615
ENSMUSG00000057554.14_12455726_12469895_1	chr13	-	983	6	NNC	ENSMUSG00000057554.14	novel	1241	8	NA	NA	4242	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1885	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCATGACTGCCAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	12469895	12455725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_12455876_12462027_12462194_12463299_12463389_12465739_12465915_12468161_12468286_12469616
ENSMUSG00000057554.14_12455726_12474105_1	chr13	-	1053	8	NNC	ENSMUSG00000057554.14	novel	1241	8	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCATGACTGCCAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	12474105	12455725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_12455876_12462027_12462194_12463299_12463389_12465739_12465913_12468161_12468286_12469615_12469827_12471224_12471314_12474054
ENSMUSG00000057554.14_12455726_12474105_2	chr13	-	1055	8	FSM	ENSMUSG00000057554.14	ENST00000352231.6	1193	8	32	106	32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCATGACTGCCAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	12474105	12455725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12465739_12465915_12468161_12468286_12469615_12469827_12471224_12471314_12474054
ENSMUSG00000057554.14_12455726_12474105_3	chr13	-	1054	8	NNC	ENSMUSG00000057554.14	novel	1241	8	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCATGACTGCCAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	12474105	12455725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_12455876_12462027_12462194_12463299_12463389_12465739_12465915_12468161_12468286_12469615_12469827_12471225_12471314_12474054
ENSMUSG00000057554.14_12465780_12471290_1	chr13	-	365	3	ISM	ENSMUSG00000057554.14	ENST00000416919.6	1070	7	2847	10208	2847	-10054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATCCTACCTCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	12471290	12465779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_12465843_12469590_12469827_12471224
ENSMUSG00000057561.11_46730792_46741840_1	chr18	+	1406	3	FSM	ENSMUSG00000057561.11	ENSMUST00000078079.11	2865	3	21	1438	0	-398	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTATCTTGACTTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	46730791	46741840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_46730868_46731707_46731768_46740570
ENSMUSG00000057561.11_46732367_46742245_1	chr18	+	1776	2	ISM	ENSMUSG00000057561.11	ENSMUST00000235455.2	1905	4	1545	0	1286	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCTTTTTAATATGTT	NA	NA	NA	NA	NA	NA	NA	NA	46732366	46742245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_46732468_46740570
ENSMUSG00000057572.16_129229488_129236966_1	chr4	+	728	5	ISM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	0	6698	0	-3762	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATTCAAACTAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	129229487	129236966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913
ENSMUSG00000057572.16_129229805_129240826_1	chr4	+	678	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	317	2838	0	98	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGTAGCAGTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	129229804	129240826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ENSMUSG00000057572.16_129229840_129240862_1	chr4	+	679	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	352	2802	35	134	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTTTTTGAGGAGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	129229839	129240862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ENSMUSG00000057572.16_129235338_129241046_1	chr4	+	677	5	ISM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	5850	2618	5533	318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCCCTACCCACCCACT	NA	NA	NA	NA	NA	NA	NA	NA	129235337	129241046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ENSMUSG00000057594.13_120356417_120358222_1	chr11	-	554	5	FSM	ENSMUSG00000057594.13	ENSMUST00000076921.7	911	5	204	153	204	104	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGGTGTTTGATAGGA	NA	NA	NA	NA	NA	NA	NA	NA	120358222	120356416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120356648_120356809_120356926_120357479_120357594_120358007_120358067_120358188
ENSMUSG00000057594.13_120356580_120357146_1	chr11	-	280	3	NNC	ENSMUSG00000057594.13	novel	550	4	NA	NA	449	-59	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCCAAGCAAAACATCACC	NA	NA	NA	NA	NA	NA	NA	NA	120357146	120356579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_120356648_120356811_120356926_120357048
ENSMUSG00000057594.13_120356580_120357146_2	chr11	-	281	3	NNC	ENSMUSG00000057594.13	novel	550	4	NA	NA	449	-59	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCCAAGCAAAACATCACC	NA	NA	NA	NA	NA	NA	NA	NA	120357146	120356579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_120356648_120356809_120356926_120357049
ENSMUSG00000057594.13_120356580_120357146_3	chr11	-	282	3	ISM	ENSMUSG00000057594.13	ENST00000573715.2	550	4	449	59	449	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCCAAGCAAAACATCACC	NA	NA	NA	NA	NA	NA	NA	NA	120357146	120356579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120356648_120356809_120356926_120357048
ENSMUSG00000057594.13_120356580_120358426_1	chr11	-	595	5	FSM	ENSMUSG00000057594.13	ENSMUST00000076921.7	911	5	0	316	0	-59	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCCAAGCAAAACATCACC	NA	NA	NA	NA	NA	NA	NA	NA	120358426	120356579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120356648_120356809_120356926_120357479_120357594_120358007_120358067_120358188
ENSMUSG00000057594.13_120356594_120357512_1	chr11	-	394	4	FSM	ENSMUSG00000057594.13	ENST00000573715.2	550	4	83	73	83	-73	multi-exon	FALSE	canonical	NA	NA	NA	NA	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATCATTGCTTGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	120357512	120356593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120356648_120356809_120356926_120357048_120357240_120357479
ENSMUSG00000057604.10_112250719_112307386_1	chr6	+	1474	5	FSM	ENSMUSG00000057604.10	ENST00000397386.7	1383	5	-85	-6	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACTTTTATCTCGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	112250718	112307386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_112250934_112282009_112282099_112292536_112292873_112305623_112305840_112306768
ENSMUSG00000057604.10_112250719_112307386_2	chr6	+	1468	5	NNC	ENSMUSG00000057604.10	novel	1730	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACTTTTATCTCGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	112250718	112307386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_112250934_112282009_112282093_112292536_112292873_112305623_112305840_112306768
ENSMUSG00000057604.10_112250719_112307386_3	chr6	+	1473	5	NNC	ENSMUSG00000057604.10	novel	1730	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACTTTTATCTCGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	112250718	112307386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_112250934_112282010_112282099_112292536_112292873_112305623_112305840_112306768
ENSMUSG00000057604.10_112250719_112307386_4	chr6	+	1466	5	NNC	ENSMUSG00000057604.10	novel	1730	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACTTTTATCTCGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	112250718	112307386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_112250934_112282009_112282099_112292536_112292873_112305623_112305832_112306768
ENSMUSG00000057604.10_112287491_112292658_1	chr6	+	334	2	ISM	ENSMUSG00000057604.10	ENSMUST00000032376.6	1730	6	36772	14728	36687	-14722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCGTGGACTTGTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	112287490	112292658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_112287703_112292536
ENSMUSG00000057606.15_31246286_31275753_1	chr14	-	1194	15	ISM	ENSMUSG00000057606.15	ENST00000383786.9	1424	16	23520	0	4344	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGGGACAGTGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	31275753	31246285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31246437_31247942_31248046_31250232_31250354_31250723_31250844_31251449_31251590_31257545_31257652_31261777_31261859_31265743_31265780_31265944_31265990_31266615_31266643_31267013_31267077_31269403_31269476_31271055_31271083_31271413_31271459_31275696
ENSMUSG00000057606.15_31246286_31275753_2	chr14	-	1178	14	NNC	ENSMUSG00000057606.15	novel	1424	16	NA	NA	4344	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGGGACAGTGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	31275753	31246285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_31246437_31247942_31248046_31250232_31250354_31250723_31250844_31251449_31251590_31257545_31257652_31261777_31261859_31265743_31265780_31265944_31265990_31267002_31267077_31269403_31269476_31271055_31271083_31271413_31271459_31275696
ENSMUSG00000057606.15_31246359_31275812_1	chr14	-	1180	15	ISM	ENSMUSG00000057606.15	ENST00000383786.9	1424	16	23461	73	4285	-73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACAGGTGGGCTGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	31275812	31246358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31246437_31247942_31248046_31250232_31250354_31250723_31250844_31251449_31251590_31257545_31257652_31261777_31261859_31265743_31265780_31265944_31265990_31266615_31266643_31267013_31267077_31269403_31269476_31271055_31271083_31271413_31271459_31275696
ENSMUSG00000057606.15_31246359_31299203_1	chr14	-	1281	16	FSM	ENSMUSG00000057606.15	ENST00000383786.9	1424	16	70	73	70	-73	multi-exon	FALSE	canonical	NA	NA	NA	NA	1495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACAGGTGGGCTGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	31299203	31246358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_31246437_31247942_31248046_31250232_31250354_31250723_31250844_31251449_31251590_31257545_31257652_31261777_31261859_31265743_31265780_31265944_31265990_31266615_31266643_31267013_31267077_31269403_31269476_31271055_31271083_31271413_31271459_31275696_31275810_31299099
ENSMUSG00000057606.15_31247943_31299203_1	chr14	-	1203	15	ISM	ENSMUSG00000057606.15	ENST00000383786.9	1424	16	70	1657	70	-1657	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGAGGCCTCCTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	31299203	31247942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_31248046_31250232_31250354_31250723_31250844_31251449_31251590_31257545_31257652_31261777_31261859_31265743_31265780_31265944_31265990_31266615_31266643_31267013_31267077_31269403_31269476_31271055_31271083_31271413_31271459_31275696_31275810_31299099
ENSMUSG00000057609.7_92554041_92554483_1	chr3	-	355	2	FSM	ENSMUSG00000057609.7	ENST00000326233.7	355	2	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGCAACTAACACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	92554483	92554040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_92554099_92554186
ENSMUSG00000057609.7_92554041_92554483_2	chr3	-	352	2	NNC	ENSMUSG00000057609.7	novel	355	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGCAACTAACACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	92554483	92554040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_92554084_92554174
ENSMUSG00000057609.7_92554041_92554483_3	chr3	-	349	2	NNC	ENSMUSG00000057609.7	novel	355	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1002	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGCAACTAACACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	92554483	92554040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_92554099_92554192
ENSMUSG00000057637.14_142835863_142888665_1	chr4	-	388	4	FSM	ENSMUSG00000057637.14	ENST00000505823.5	400	4	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATGAGAGAGGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	142888665	142835862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_142835956_142838203_142838348_142868693_142868805_142888625
ENSMUSG00000057637.14_142835863_142888665_2	chr4	-	382	4	NNC	ENSMUSG00000057637.14	novel	400	4	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATGAGAGAGGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	142888665	142835862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_142835956_142838203_142838342_142868693_142868805_142888625
ENSMUSG00000057649.7_74085976_74099709_1	chr13	+	1362	12	ISM	ENSMUSG00000057649.7	ENSMUST00000222399.2	2430	16	46	9304	19	-9304	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGACCAAATCACAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	74085975	74099709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652
ENSMUSG00000057649.7_74086551_74102702_1	chr13	+	1369	12	ISM	ENSMUSG00000057649.7	ENSMUST00000222399.2	2430	16	621	6311	594	-6311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTTTCCCAAGCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	74086550	74102702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663
ENSMUSG00000057649.7_74086757_74105876_1	chr13	+	1311	14	ISM	ENSMUSG00000057649.7	ENSMUST00000222399.2	2430	16	827	3137	800	-3137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGAGACAGCCAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	74086756	74105876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831
ENSMUSG00000057649.7_74087080_74105982_1	chr13	+	1310	13	ISM	ENSMUSG00000057649.7	ENSMUST00000222399.2	2430	16	1150	3031	1123	-3031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCATCCTCCTCCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	74087079	74105982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831
ENSMUSG00000057649.7_74088352_74108388_1	chr13	+	1326	13	ISM	ENSMUSG00000057649.7	ENSMUST00000222399.2	2430	16	2422	625	2395	-625	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGATGTCGCCCACGACCC	NA	NA	NA	NA	NA	NA	NA	NA	74088351	74108388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74088417_74088764_74088910_74090062_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ENSMUSG00000057649.7_74088835_74108497_1	chr13	+	1300	12	ISM	ENSMUSG00000057649.7	ENSMUST00000222399.2	2430	16	2905	516	2878	-516	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTGATACAGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	74088834	74108497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74088910_74090062_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ENSMUSG00000057649.7_74088835_74108554_1	chr13	+	1357	12	ISM	ENSMUSG00000057649.7	ENSMUST00000222399.2	2430	16	2905	459	2878	-459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGCAGCCTGAGGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	74088834	74108554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74088910_74090062_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ENSMUSG00000057649.7_74090099_74108690_1	chr13	+	1382	11	ISM	ENSMUSG00000057649.7	ENSMUST00000222399.2	2430	16	4169	323	4142	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTCCTGAGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	74090098	74108690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ENSMUSG00000057649.7_74090138_74108690_1	chr13	+	1343	11	ISM	ENSMUSG00000057649.7	ENSMUST00000222399.2	2430	16	4208	323	4181	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTCCTGAGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	74090137	74108690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ENSMUSG00000057649.7_74092906_74108932_1	chr13	+	1375	9	ISM	ENSMUSG00000057649.7	ENSMUST00000099384.4	2407	16	6949	82	6949	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGCTGAGTACCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	74092905	74108932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ENSMUSG00000057649.7_74092944_74108937_1	chr13	+	1342	9	ISM	ENSMUSG00000057649.7	ENSMUST00000099384.4	2407	16	6987	77	6987	-76	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGTACCTGTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	74092943	74108937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ENSMUSG00000057666.19_125138817_125142736_1	chr6	-	1414	7	NNC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	38906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	125142736	125138816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_125139065_125139174_125139351_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
ENSMUSG00000057666.19_125138817_125142736_2	chr6	-	1413	7	NNC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	39907	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	125142736	125138816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142521
ENSMUSG00000057666.19_125138817_125142736_3	chr6	-	1393	6	NNC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	38379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	125142736	125138816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142500
ENSMUSG00000057672.17_84396728_84404246_1	chr8	-	1261	11	ISM	ENSMUSG00000057672.17	ENST00000342216.8	2882	21	15321	-5	15321	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGCATTTTCAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	84404246	84396727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152
ENSMUSG00000057672.17_84396891_84404464_1	chr8	-	1228	12	ISM	ENSMUSG00000057672.17	ENST00000342216.8	2882	21	15103	158	15103	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCCCACACTGAGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	84404464	84396890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334
ENSMUSG00000057672.17_84397368_84404635_1	chr8	-	1209	12	ISM	ENSMUSG00000057672.17	ENST00000342216.8	2882	21	14932	635	14932	-635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGGACCCCTCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	84404635	84397367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559
ENSMUSG00000057672.17_84398003_84410093_1	chr8	-	1264	13	ISM	ENSMUSG00000057672.17	ENST00000342216.8	2882	21	9474	1270	9474	-1270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGACACATCCTACACGCG	NA	NA	NA	NA	NA	NA	NA	NA	84410093	84398002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407914_84410023
ENSMUSG00000057672.17_84398007_84407892_1	chr8	-	1169	12	ISM	ENSMUSG00000057672.17	ENST00000342216.8	2882	21	11675	1274	11675	-1274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCACAGACACATCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	84407892	84398006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808
ENSMUSG00000057672.17_84398869_84410723_1	chr8	-	1193	11	ISM	ENSMUSG00000057672.17	ENST00000342216.8	2882	21	8844	2136	8844	-2136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGCTTTGTGATGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	84410723	84398868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407914_84410023_84410223_84410631
ENSMUSG00000057672.17_84400260_84411412_1	chr8	-	1202	9	ISM	ENSMUSG00000057672.17	ENST00000342216.8	2882	21	8155	3527	8155	-3527	internal_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATACCCCTTCCTAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	84411412	84400259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407914_84410023_84410223_84410631_84410846_84411264
ENSMUSG00000057672.17_84404179_84413753_1	chr8	-	1179	9	ISM	ENSMUSG00000057672.17	ENST00000342216.8	2882	21	5814	7446	5814	-7446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCCCTCCACCTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	84413753	84404178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407914_84410023_84410223_84410631_84410846_84411264_84411411_84413668
ENSMUSG00000057672.17_84404413_84417752_1	chr8	-	1168	9	ISM	ENSMUSG00000057672.17	ENST00000342216.8	2882	21	1815	7680	1815	-7680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTCATCCCTAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	84417752	84404412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84404477_84404559_84404636_84407582_84407727_84407808_84407914_84410023_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677
ENSMUSG00000057672.17_84404584_84419356_1	chr8	-	1249	9	ISM	ENSMUSG00000057672.17	ENST00000342216.8	2882	21	211	7851	211	-7851	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTTCTCCAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	84419356	84404583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84404636_84407582_84407727_84407808_84407914_84410023_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264
ENSMUSG00000057672.17_84407634_84419369_1	chr8	-	1159	8	ISM	ENSMUSG00000057672.17	ENST00000342216.8	2882	21	198	10901	198	-10901	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATGAGGTGCAGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	84419369	84407633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84407727_84407808_84407914_84410023_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264
ENSMUSG00000057672.17_84410107_84425726_1	chr8	-	1205	7	ISM	ENSMUSG00000057672.17	ENST00000242783.11	3095	22	84	13374	82	-13374	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGCTCGGGGCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84425726	84410106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ENSMUSG00000057672.17_84410139_84425726_1	chr8	-	1173	7	ISM	ENSMUSG00000057672.17	ENST00000242783.11	3095	22	84	13406	82	-13406	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCCCCGAAAGCCGCACT	NA	NA	NA	NA	NA	NA	NA	NA	84425726	84410138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ENSMUSG00000057672.17_84410201_84425752_1	chr8	-	1137	7	ISM	ENSMUSG00000057672.17	ENST00000242783.11	3095	22	58	13468	56	-13468	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGCAAAAACCTTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	84425752	84410200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ENSMUSG00000057691.9_48058677_48063480_1	chr6	-	754	5	FSM	ENSMUSG00000057691.9	ENST00000461958.2	744	5	-10	0	-10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTCGACGTGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	48063480	48058676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_48058703_48059087_48059202_48060026_48060109_48060239_48060540_48063248
ENSMUSG00000057691.9_48058677_48063480_2	chr6	-	748	5	NNC	ENSMUSG00000057691.9	novel	744	5	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTCGACGTGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	48063480	48058676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_48058703_48059093_48059202_48060026_48060109_48060239_48060540_48063248
ENSMUSG00000057691.9_48059088_48060256_1	chr6	-	258	3	FSM	ENSMUSG00000057691.9	ENST00000513792.1	542	3	284	0	284	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGGGTTGGGAAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	48060256	48059087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_48059202_48060026_48060154_48060239
ENSMUSG00000057691.9_48059088_48063379_1	chr6	-	545	3	FSM	ENSMUSG00000057691.9	ENST00000463567.5	545	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGGGTTGGGAAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	48063379	48059087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_48059202_48060239_48060540_48063248
ENSMUSG00000057691.9_48059119_48060326_1	chr6	-	297	3	FSM	ENSMUSG00000057691.9	ENST00000513792.1	542	3	214	31	214	-31	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCGGAGGTTCCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	48060326	48059118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_48059202_48060026_48060154_48060239
ENSMUSG00000057691.9_48059165_48060381_1	chr6	-	306	3	FSM	ENSMUSG00000057691.9	ENST00000513792.1	542	3	159	77	159	-77	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAAGGCAAGGAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	48060381	48059164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_48059202_48060026_48060154_48060239
ENSMUSG00000057691.9_48060118_48060496_1	chr6	-	293	2	ISM	ENSMUSG00000057691.9	ENST00000513792.1	542	3	44	1030	44	-1030	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATCAGGAGTGGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	48060496	48060117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_48060154_48060239
ENSMUSG00000057835.8_56172572_56175685_1	chr17	-	1267	3	ISM	ENSMUSG00000057835.8	ENSMUST00000079642.8	2018	4	10245	680	10245	-680	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGGAGAAAAACCCTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	56175685	56172571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_56173651_56175302_56175364_56175558
ENSMUSG00000057841.6_115782466_115785075_1	chr6	-	679	3	FSM	ENSMUSG00000057841.6	ENSMUST00000203816.2	906	3	234	-7	234	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATGTTTTTGGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	115785075	115782465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_115782650_115783946_115784129_115784762
ENSMUSG00000057841.6_115782466_115785708_1	chr6	-	509	4	NNC	ENSMUSG00000057841.6	novel	517	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATGTTTTTGGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	115785708	115782465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_115782650_115783946_115784129_115784762_115784864_115785666
ENSMUSG00000057841.6_115782466_115785708_2	chr6	-	508	4	NNC	ENSMUSG00000057841.6	novel	517	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATGTTTTTGGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	115785708	115782465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_115782650_115783955_115784129_115784762_115784864_115785658
ENSMUSG00000057858.9_60187347_60208540_1	chr19	-	839	4	ISM	ENSMUSG00000057858.9	ENSMUST00000238054.2	951	8	6578	-332	1188	-329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAGTTGATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	60208540	60187346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471
ENSMUSG00000057858.9_60187483_60208935_1	chr19	-	779	6	ISM	ENSMUSG00000057858.9	ENSMUST00000238054.2	951	8	6183	-196	793	196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTATAGTGGATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	60208935	60187482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921
ENSMUSG00000057858.9_60187550_60208987_1	chr19	-	764	6	ISM	ENSMUSG00000057858.9	ENSMUST00000238054.2	951	8	6131	-129	741	129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTTCCTTATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	60208987	60187549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921
ENSMUSG00000057858.9_60187679_60209652_2	chr19	-	824	7	ISM	ENSMUSG00000057858.9	ENSMUST00000238054.2	951	8	5466	0	76	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATATTTGTGTAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	60209652	60187678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485
ENSMUSG00000057858.9_60187867_60209652_1	chr19	-	517	5	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	76	3	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGAGTTCTTCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	60209652	60187866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60209485
ENSMUSG00000057858.9_60187867_60209736_1	chr19	-	601	5	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	-8	3	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGAGTTCTTCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	60209736	60187866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60209485
ENSMUSG00000057858.9_60187867_60214705_1	chr19	-	762	8	FSM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	424	849	413	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGAGTTCTTCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	60214705	60187866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214663
ENSMUSG00000057858.9_60188401_60214856_1	chr19	-	861	7	ISM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	273	1383	262	-531	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTCACTTAAGACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	60214856	60188400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214663
ENSMUSG00000057858.9_60208560_60215101_1	chr19	-	820	5	ISM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	28	21542	17	-20690	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGACCCAGTGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	60215101	60208559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214663
ENSMUSG00000057863.7_56920583_56921243_1	chr17	+	353	3	ISM	ENSMUSG00000057863.7	ENSMUST00000080492.7	383	4	167	0	167	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTTGTGTATGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	56920582	56921243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56920681_56920906_56921042_56921123
ENSMUSG00000057863.7_56920636_56921244_1	chr17	+	301	3	ISM	ENSMUSG00000057863.7	ENSMUST00000080492.7	383	4	220	-1	220	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTGTGTATGTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	56920635	56921244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_56920681_56920906_56921042_56921123
ENSMUSG00000057880.13_8396129_8436526_1	chr16	+	1438	13	FSM	ENSMUSG00000057880.13	ENST00000425191.6	1566	13	35	93	35	-93	multi-exon	FALSE	canonical	NA	NA	NA	NA	3536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGGCGTCAACGTGATTA	NA	NA	NA	NA	NA	NA	NA	NA	8396128	8436526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_8396193_8400567_8400719_8406749_8406800_8418773_8418855_8420149_8420243_8421333_8421397_8421552_8421617_8423375_8423525_8426719_8426858_8428990_8429159_8431846_8431994_8433753_8433866_8436368
ENSMUSG00000057880.13_8396129_8436526_2	chr16	+	1432	13	NNC	ENSMUSG00000057880.13	novel	1566	13	NA	NA	35	-93	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3075	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGGCGTCAACGTGATTA	NA	NA	NA	NA	NA	NA	NA	NA	8396128	8436526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_8396193_8400567_8400719_8406749_8406800_8418773_8418855_8420149_8420243_8421333_8421397_8421552_8421617_8423375_8423525_8426725_8426858_8428990_8429159_8431846_8431994_8433753_8433866_8436368
ENSMUSG00000057880.13_8400566_8436526_1	chr16	+	1367	12	NNC	ENSMUSG00000057880.13	novel	1566	13	NA	NA	4472	-93	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2094	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGGCGTCAACGTGATTA	NA	NA	NA	NA	NA	NA	NA	NA	8400565	8436526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_8400719_8406749_8406800_8418773_8418855_8420149_8420243_8421333_8421397_8421552_8421617_8423384_8423525_8426719_8426858_8428990_8429159_8431846_8431994_8433753_8433866_8436368
ENSMUSG00000057880.13_8400620_8436526_1	chr16	+	1317	12	NNC	ENSMUSG00000057880.13	novel	1566	13	NA	NA	4526	-93	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGGCGTCAACGTGATTA	NA	NA	NA	NA	NA	NA	NA	NA	8400619	8436526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_8400719_8406749_8406800_8418773_8418855_8420149_8420243_8421333_8421397_8421552_8421617_8423375_8423525_8426719_8426858_8428990_8429154_8431846_8431994_8433753_8433866_8436368
ENSMUSG00000057880.13_8421551_8436721_1	chr16	+	1133	7	ISM	ENSMUSG00000057880.13	ENST00000396600.6	1667	13	25457	-1	25457	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGTGTAAGCATTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	8421550	8436721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_8421617_8423375_8423525_8426719_8426858_8428990_8429159_8431846_8431994_8433753_8433866_8436368
ENSMUSG00000057895.12_122754208_122758743_1	chr9	+	233	2	FSM	ENSMUSG00000057895.12	ENST00000399560.2	435	2	105	97	105	-97	multi-exon	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGAATCCAGAAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	122754207	122758743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_122754362_122758664
ENSMUSG00000057895.12_122754287_122758840_1	chr9	+	251	2	FSM	ENSMUSG00000057895.12	ENST00000399560.2	435	2	184	0	184	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATTTGGGAGAAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	122754286	122758840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_122754362_122758664
ENSMUSG00000057897.15_5920036_5922289_1	chr11	-	279	2	ISM	ENSMUSG00000057897.15	ENST00000350811.7	2289	21	93324	378	93249	-364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGCCATGGACAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	5922289	5920035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5920242_5922216
ENSMUSG00000057897.15_5920153_5922405_1	chr11	-	278	2	ISM	ENSMUSG00000057897.15	ENST00000350811.7	2289	21	93208	495	93133	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCCACACTGTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	5922405	5920152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5920242_5922216
ENSMUSG00000057897.15_5921735_5978961_1	chr11	-	1584	19	NNC	ENSMUSG00000057897.15	novel	1650	20	NA	NA	36577	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCCTCCCCTGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	5978961	5921734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5931069_5931115_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965450_5965510_5978866
ENSMUSG00000057897.15_5921735_6015538_1	chr11	-	1443	16	FSM	ENSMUSG00000057897.15	ENST00000346990.8	1446	16	3	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCCTCCCCTGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6015538	5921734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUSG00000057897.15_5921735_6015538_10	chr11	-	1650	20	NIC	ENSMUSG00000057897.15	novel	1650	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCCTCCCCTGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6015538	5921734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5931069_5931115_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUSG00000057897.15_5921735_6015538_11	chr11	-	1644	20	NNC	ENSMUSG00000057897.15	novel	1650	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCCTCCCCTGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6015538	5921734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5931069_5931115_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939337_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUSG00000057897.15_5921735_6015538_12	chr11	-	1642	20	NNC	ENSMUSG00000057897.15	novel	1650	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCCTCCCCTGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6015538	5921734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5931069_5931115_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965502_5978866_5978962_6015473
ENSMUSG00000057897.15_5921735_6015538_2	chr11	-	1642	20	NNC	ENSMUSG00000057897.15	novel	1650	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCCTCCCCTGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6015538	5921734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5931069_5931115_5932500_5932573_5932720_5932754_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUSG00000057897.15_5921735_6015538_3	chr11	-	1644	20	NNC	ENSMUSG00000057897.15	novel	1650	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCCTCCCCTGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6015538	5921734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5931069_5931115_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940417_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUSG00000057897.15_5921735_6015538_4	chr11	-	1636	19	NNC	ENSMUSG00000057897.15	novel	1650	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCCTCCCCTGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6015538	5921734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5931069_5931115_5932500_5932573_5938073_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUSG00000057897.15_5921735_6015538_6	chr11	-	1641	20	NNC	ENSMUSG00000057897.15	novel	1650	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCCTCCCCTGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6015538	5921734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5931069_5931115_5932500_5932567_5932720_5932759_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUSG00000057897.15_5921735_6015538_7	chr11	-	1645	20	NNC	ENSMUSG00000057897.15	novel	1650	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCCTCCCCTGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6015538	5921734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5931069_5931115_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940324_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUSG00000057897.15_5921735_6015538_8	chr11	-	1643	20	NNC	ENSMUSG00000057897.15	novel	1650	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCCTCCCCTGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6015538	5921734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5931069_5931115_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939580_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUSG00000057897.15_5921735_6015538_9	chr11	-	1442	16	NNC	ENSMUSG00000057897.15	novel	1650	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCCTCCCCTGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6015538	5921734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978867_5978962_6015473
ENSMUSG00000057897.15_5932512_5939019_1	chr11	-	282	5	ISM	ENSMUSG00000057897.15	ENSMUST00000019133.11	2223	24	76593	10832	76519	-10295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCCCTGGTACTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	5939019	5932511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_5932573_5932720_5932759_5937056_5937132_5938100_5938144_5938954
ENSMUSG00000057914.16_14744386_14987612_1	chr2	+	1077	10	ISM	ENSMUSG00000057914.16	ENST00000377319.8	1883	12	49	3275	49	-3275	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAATCTCGAGGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	14744385	14987612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_14744575_14879580_14879701_14963576_14963700_14965465_14965603_14968716_14968809_14976372_14976454_14976872_14976932_14979940_14980051_14986116_14986269_14987598
ENSMUSG00000057914.16_14744528_14989094_1	chr2	+	1047	11	ISM	ENSMUSG00000057914.16	ENST00000377319.8	1883	12	191	1793	191	-1793	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGAGGACGCTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	14744527	14989094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_14744575_14879580_14879701_14963576_14963700_14965465_14965603_14968716_14968809_14976372_14976454_14976872_14976932_14979940_14980051_14986116_14986269_14987598_14987695_14989064
ENSMUSG00000057914.16_14879559_14989251_1	chr2	+	1179	10	ISM	ENSMUSG00000057914.16	ENST00000377319.8	1883	12	135222	1636	-19	-1636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGCACTTCCTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	14879558	14989251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_14879701_14963576_14963700_14965465_14965603_14968716_14968809_14976372_14976454_14976872_14976932_14979940_14980051_14986116_14986269_14987598_14987695_14989064
ENSMUSG00000057914.16_14879559_14990410_1	chr2	+	1236	12	FSM	ENSMUSG00000057914.16	ENST00000352115.10	1694	12	-19	477	-19	-477	multi-exon	FALSE	canonical	NA	NA	NA	NA	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAAAGGCCTGATCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	14879558	14990410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_14879701_14963576_14963700_14965465_14965603_14968716_14968794_14973506_14973568_14976372_14976454_14976872_14976932_14979940_14980051_14986116_14986269_14987598_14987695_14989064_14989251_14990398
ENSMUSG00000057914.16_14963575_14990470_1	chr2	+	1110	10	ISM	ENSMUSG00000057914.16	ENST00000377319.8	1883	12	219238	417	83997	-417	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGAACCCGTCAAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	14963574	14990470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_14963700_14965465_14965603_14968716_14968809_14976372_14976454_14976872_14976932_14979940_14980051_14986116_14986269_14987598_14987695_14989064_14989251_14990398
ENSMUSG00000057914.16_14963575_14990470_2	chr2	+	1156	11	ISM	ENSMUSG00000057914.16	ENST00000352115.10	1694	12	83997	417	83997	-417	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGAACCCGTCAAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	14963574	14990470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_14963700_14965465_14965603_14968716_14968794_14973506_14973568_14976372_14976454_14976872_14976932_14979940_14980051_14986116_14986269_14987598_14987695_14989064_14989251_14990398
ENSMUSG00000057914.16_14968714_14990746_1	chr2	+	1173	9	ISM	ENSMUSG00000057914.16	ENST00000352115.10	1694	12	89136	141	89136	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAGGACCACAATGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	14968713	14990746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_14968794_14973506_14973568_14976372_14976454_14976872_14976932_14979940_14980051_14986116_14986269_14987598_14987695_14989064_14989251_14990398
ENSMUSG00000057914.16_14968736_14990695_1	chr2	+	1054	8	ISM	ENSMUSG00000057914.16	ENST00000377319.8	1883	12	224399	192	89158	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGCCACAGACACAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	14968735	14990695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_14968809_14976372_14976454_14976872_14976932_14979940_14980051_14986116_14986269_14987598_14987695_14989064_14989251_14990398
ENSMUSG00000057914.16_14973506_14990960_1	chr2	+	1308	8	ISM	ENSMUSG00000057914.16	ENST00000352115.10	1694	12	93928	-73	93928	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGATTTGTCTTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	14973505	14990960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_14973568_14976372_14976454_14976872_14976932_14979940_14980051_14986116_14986269_14987598_14987695_14989064_14989251_14990398
ENSMUSG00000057914.16_14976372_14990960_1	chr2	+	1250	7	ISM	ENSMUSG00000057914.16	ENSMUST00000114719.7	2117	13	97892	0	96794	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGATTTGTCTTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	14976371	14990960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_14976454_14976872_14976932_14979940_14980051_14986116_14986269_14987598_14987695_14989061_14989251_14990398
ENSMUSG00000057969.16_107475554_107482304_1	chr9	-	2694	17	ISM	ENSMUSG00000057969.16	ENSMUST00000102529.10	2875	18	297	0	297	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTGGAATGGCCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	107482304	107475553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167
ENSMUSG00000057969.16_107475662_107482500_1	chr9	-	2666	18	FSM	ENSMUSG00000057969.16	ENSMUST00000102529.10	2875	18	101	108	101	-108	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTTCTTGGGCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	107482500	107475661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482470
ENSMUSG00000057969.16_107475708_107482601_1	chr9	-	2721	18	FSM	ENSMUSG00000057969.16	ENSMUST00000102529.10	2875	18	0	154	0	-154	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGGACCAGAGAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	107482601	107475707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482470
ENSMUSG00000057969.16_107475774_107482601_1	chr9	-	2655	18	FSM	ENSMUSG00000057969.16	ENSMUST00000102529.10	2875	18	0	220	0	-220	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGCCTAAGCTCAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	107482601	107475773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482470
ENSMUSG00000058013.12_93241395_93315419_1	chr5	+	1182	9	FSM	ENSMUSG00000058013.12	ENSMUST00000201700.4	3478	9	98	2198	10	-2198	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGAAGAAGGAGCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	93241394	93315419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358
ENSMUSG00000058013.12_93287308_93315546_1	chr5	+	1247	8	ISM	ENSMUSG00000058013.12	ENSMUST00000201700.4	3478	9	46011	2071	45878	-2071	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCAGGTGTCGCCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	93287307	93315546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358
ENSMUSG00000058013.12_93287308_93323936_1	chr5	+	1986	10	ISM	ENSMUSG00000058013.12	ENSMUST00000201421.4	2428	11	45923	370	45878	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTTTAAATTCAGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	93287307	93323936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93321331_93321397_93323262
ENSMUSG00000058013.12_93296245_93323936_1	chr5	+	1171	8	ISM	ENSMUSG00000058013.12	ENSMUST00000202308.4	1792	10	54935	360	54815	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTTTAAATTCAGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	93296244	93323936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93323898
ENSMUSG00000058013.12_93296362_93319233_1	chr5	+	1052	8	ISM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	55066	3584	54932	1616	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCCGCATTCACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	93296361	93319233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ENSMUSG00000058013.12_93302726_93324122_1	chr5	+	1163	7	ISM	ENSMUSG00000058013.12	ENSMUST00000202308.4	1792	10	61416	174	61296	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGGAGAATTCTGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	93302725	93324122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93323898
ENSMUSG00000058013.12_93302768_93324179_1	chr5	+	1879	8	ISM	ENSMUSG00000058013.12	ENSMUST00000201421.4	2428	11	61383	127	61338	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTACTAGAGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	93302767	93324179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93321331_93321397_93323262
ENSMUSG00000058013.12_93302768_93324185_1	chr5	+	1184	7	ISM	ENSMUSG00000058013.12	ENSMUST00000202308.4	1792	10	61458	111	61338	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGAGTTTTGATCTACA	NA	NA	NA	NA	NA	NA	NA	NA	93302767	93324185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93323898
ENSMUSG00000058013.12_93302814_93324296_1	chr5	+	1950	8	ISM	ENSMUSG00000058013.12	ENSMUST00000201421.4	2428	11	61429	10	61384	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCCCATCCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	93302813	93324296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93321331_93321397_93323262
ENSMUSG00000058013.12_93302841_93324296_1	chr5	+	1222	7	ISM	ENSMUSG00000058013.12	ENSMUST00000202308.4	1792	10	61531	0	61411	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCCCATCCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	93302840	93324296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93323898
ENSMUSG00000058013.12_93302848_93319413_1	chr5	+	1033	7	ISM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	61552	3404	61418	1796	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTTTCTCGAAAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	93302847	93319413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ENSMUSG00000058013.12_93302881_93324307_1	chr5	+	1894	8	ISM	ENSMUSG00000058013.12	ENSMUST00000201421.4	2428	11	61496	-1	61451	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTTTGAATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	93302880	93324307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93321331_93321397_93323262
ENSMUSG00000058013.12_93309057_93319681_1	chr5	+	1023	5	ISM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	67761	3136	67627	2064	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGAAAGTAGGCAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	93309056	93319681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ENSMUSG00000058013.12_93313147_93319964_1	chr5	+	1049	3	ISM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	71851	2853	71717	2347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGGAGGCTGGATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	93313146	93319964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_93313241_93315358_93315547_93319197
ENSMUSG00000058013.12_93315501_93320212_1	chr5	+	1061	2	ISM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	74205	2605	74071	2595	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGGCCTGATAGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	93315500	93320212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_93315547_93319197
ENSMUSG00000058056.17_61965679_61968289_1	chr8	-	980	3	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	362645	1198	75887	-1198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGAGGCAGGTTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	61968289	61965678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61966559_61968021_61968069_61968236
ENSMUSG00000058056.17_61965763_61968295_1	chr8	-	855	2	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	75881	1296	75881	-1282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGGGTTCTGGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	61968295	61965762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61966559_61968236
ENSMUSG00000058056.17_61965834_61968970_1	chr8	-	974	4	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	361964	1353	75206	-1353	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTTGTCTGTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	61968970	61965833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61966559_61968021_61968069_61968236_61968371_61968902
ENSMUSG00000058056.17_61965894_61969020_1	chr8	-	964	4	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	361914	1413	75156	-1413	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTTATGTTACATCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	61969020	61965893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61966559_61968021_61968069_61968236_61968371_61968902
ENSMUSG00000058056.17_61965901_61968973_1	chr8	-	863	3	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	75203	1434	75203	-1420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAAACTGCTTATGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	61968973	61965900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61966559_61968236_61968371_61968902
ENSMUSG00000058056.17_61965958_61969022_1	chr8	-	855	3	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	75154	1491	75154	-1477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTATGGGGGGGATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	61969022	61965957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61966559_61968236_61968371_61968902
ENSMUSG00000058056.17_61966040_61969659_1	chr8	-	957	5	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	361275	1559	74517	-1559	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATAGCATGGCAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	61969659	61966039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61966559_61968021_61968069_61968236_61968371_61968902_61969069_61969568
ENSMUSG00000058056.17_61966085_61991818_1	chr8	-	1778	10	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	52358	1618	52358	-1604	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAATTGATGTTATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	61991818	61966084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721
ENSMUSG00000058056.17_61966172_61975934_1	chr8	-	959	6	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	355000	1691	68242	-1691	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCCAAGTTAAGACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	61975934	61966171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61966559_61968021_61968069_61968236_61968371_61968902_61969069_61969568_61969777_61975917
ENSMUSG00000058056.17_61966344_61978171_1	chr8	-	973	7	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	352763	1863	66005	1711	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGCCTACTCCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	61978171	61966343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61966559_61968021_61968069_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101
ENSMUSG00000058056.17_61966445_61985019_1	chr8	-	971	8	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	345915	1964	59157	1610	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGCCCATCTCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	61985019	61966444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61966559_61968021_61968069_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945
ENSMUSG00000058056.17_61969710_62137840_1	chr8	-	974	8	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	193094	5229	75283	-1655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACAAGATGCTGGTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	62137840	61969709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62137768
ENSMUSG00000058056.17_61969751_62137915_1	chr8	-	1008	8	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	193019	5270	75208	-1696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTGGCAACTAGATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	62137915	61969750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62137768
ENSMUSG00000058056.17_61975940_62002645_1	chr8	-	854	7	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	41531	11473	41531	-7885	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCAGGATGGACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	62002645	61975939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604
ENSMUSG00000058056.17_61975993_62002700_1	chr8	-	856	7	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	41476	11526	41476	-7938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGACCTCACTTCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	62002700	61975992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604
ENSMUSG00000058056.17_61978155_62138111_1	chr8	-	992	6	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	192823	13674	75012	-10100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAAGAGGCCGCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	62138111	61978154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62137768
ENSMUSG00000058056.17_61984998_62002907_1	chr8	-	858	5	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	41269	20531	41269	-16943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACCCTAGACGACGATG	NA	NA	NA	NA	NA	NA	NA	NA	62002907	61984997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604
ENSMUSG00000058056.17_61985009_62140461_1	chr8	-	985	6	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	190473	20528	72662	-16954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACCACGGCCTCTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	62140461	61985008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62137768_62138112_62140363
ENSMUSG00000058056.17_61985054_62002953_1	chr8	-	848	5	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	41223	20587	41223	-16999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACTACACCATTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	62002953	61985053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604
ENSMUSG00000058056.17_61986449_62156231_1	chr8	-	980	6	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	174703	21968	56892	-18394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGAGGGGATGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	62156231	61986448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61986610_61988719_61988819_61991721_61991858_62137768_62138112_62140363_62140509_62156135
ENSMUSG00000058056.17_61986490_62003106_1	chr8	-	857	4	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	41070	22023	41070	-18435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACAGCTCCCTTCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	62003106	61986489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61986610_61988719_61988819_61991721_61991858_62002604
ENSMUSG00000058056.17_61986517_62156279_1	chr8	-	960	6	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	174655	22036	56844	-18462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGATCCAGATGTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	62156279	61986516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61986610_61988719_61988819_61991721_61991858_62137768_62138112_62140363_62140509_62156135
ENSMUSG00000058056.17_61986557_62003173_1	chr8	-	857	4	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	41003	22090	41003	-18502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCGCTCCCCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	62003173	61986556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61986610_61988719_61988819_61991721_61991858_62002604
ENSMUSG00000058056.17_61988719_62164514_1	chr8	-	1047	7	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	166420	24238	48609	-20664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCATTGCTCCTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	62164514	61988718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_61988819_61991721_61991858_62137768_62138112_62140363_62140509_62156135_62156278_62162026_62162102_62164408
ENSMUSG00000058056.17_62137768_62173612_1	chr8	-	942	7	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	157322	173287	39511	-169713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTGCATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	62173612	62137767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_62138112_62140363_62140509_62156135_62156278_62162026_62162102_62164408_62164515_62165845_62165913_62173549
ENSMUSG00000058056.17_62137928_62330018_1	chr8	-	970	8	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	916	173447	916	-169873	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAACACTGCAGAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	62330018	62137927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_62138112_62140363_62140509_62156135_62156278_62162026_62162102_62164408_62164515_62165845_62165913_62173549_62173729_62329946
ENSMUSG00000058056.17_62138043_62330139_1	chr8	-	976	8	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	795	173562	795	-169988	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCCTCCGATCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	62330139	62138042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_62138112_62140363_62140509_62156135_62156278_62162026_62162102_62164408_62164515_62165845_62165913_62173549_62173729_62329946
ENSMUSG00000058056.17_62140414_62330258_1	chr8	-	976	7	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	676	175933	676	-172359	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTACGGCTCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	62330258	62140413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_62140509_62156135_62156278_62162026_62162102_62164408_62164515_62165845_62165913_62173549_62173729_62329946
ENSMUSG00000058056.17_62140464_62330315_1	chr8	-	983	7	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	619	175983	619	-172409	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTGAGAGTTTCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	62330315	62140463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_62140509_62156135_62156278_62162026_62162102_62164408_62164515_62165845_62165913_62173549_62173729_62329946
ENSMUSG00000058056.17_62156221_62330475_1	chr8	-	1013	6	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	459	191740	459	-188166	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGGGCACCCCCGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	62330475	62156220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_62156278_62162026_62162102_62164408_62164515_62165845_62165913_62173549_62173729_62329946
ENSMUSG00000058056.17_62164499_62330672_1	chr8	-	988	4	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	262	200018	262	-196444	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCCGTTTCCTTAACGAT	NA	NA	NA	NA	NA	NA	NA	NA	62330672	62164498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_62164515_62165845_62165913_62173549_62173729_62329946
ENSMUSG00000058056.17_62173658_62330840_1	chr8	-	965	2	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	94	209177	94	-205603	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTTGGTCATTGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	62330840	62173657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_62173729_62329946
ENSMUSG00000058056.17_62173702_62330913_1	chr8	-	994	2	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	21	209221	21	-205647	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTCCTGACGTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	62330913	62173701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_62173729_62329946
ENSMUSG00000058070.15_108389075_108501010_1	chr12	+	2383	18	ISM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	0	4813	0	-3641	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACGTTTTTTCTGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	108389074	108501010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108389521_108429785_108429969_108438111_108438245_108454547_108454680_108468648_108468678_108472737_108472868_108475344_108475495_108476435_108476506_108478079_108478191_108479233_108479330_108480636_108480772_108481374_108481475_108482718_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562_108496652_108500912
ENSMUSG00000058070.15_108429810_108504447_1	chr12	+	2314	21	ISM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	40735	1376	40735	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGAAAGACACAAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	108429809	108504447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108429969_108438111_108438245_108454547_108454680_108468648_108468678_108472737_108472868_108475344_108475495_108476435_108476506_108478079_108478191_108479233_108479330_108480636_108480772_108481374_108481475_108482718_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562_108496652_108500912_108501011_108501123_108501212_108502485_108502582_108503592_108503724_108504361
ENSMUSG00000058070.15_108429885_108504518_1	chr12	+	2310	21	ISM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	40810	1305	40810	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCGCTTGGTCACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	108429884	108504518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108429969_108438111_108438245_108454547_108454680_108468648_108468678_108472737_108472868_108475344_108475495_108476435_108476506_108478079_108478191_108479233_108479330_108480636_108480772_108481374_108481475_108482718_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562_108496652_108500912_108501011_108501123_108501212_108502485_108502582_108503592_108503724_108504361
ENSMUSG00000058070.15_108454599_108504775_1	chr12	+	2299	19	ISM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	65524	1048	65524	124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGCCTTTTAAAATACT	NA	NA	NA	NA	NA	NA	NA	NA	108454598	108504775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108454680_108468648_108468678_108472737_108472868_108475344_108475495_108476435_108476506_108478079_108478191_108479233_108479330_108480636_108480772_108481374_108481475_108482718_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562_108496652_108500912_108501011_108501123_108501212_108502485_108502582_108503592_108503724_108504361
ENSMUSG00000058070.15_108475435_108505110_1	chr12	+	2304	16	ISM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	86360	713	86360	459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACACAGCCAGTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	108475434	108505110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108475495_108476435_108476506_108478079_108478191_108479233_108479330_108480636_108480772_108481374_108481475_108482718_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562_108496652_108500912_108501011_108501123_108501212_108502485_108502582_108503592_108503724_108504361
ENSMUSG00000058070.15_108476461_108505218_1	chr12	+	2327	15	ISM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	87386	605	87386	567	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATACGGTATTGTCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	108476460	108505218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108476506_108478079_108478191_108479233_108479330_108480636_108480772_108481374_108481475_108482718_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562_108496652_108500912_108501011_108501123_108501212_108502485_108502582_108503592_108503724_108504361
ENSMUSG00000058070.15_108480741_108505558_1	chr12	+	2311	12	ISM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	91666	265	91666	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGGATCTTTAAATAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	108480740	108505558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108480772_108481374_108481475_108482718_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562_108496652_108500912_108501011_108501123_108501212_108502485_108502582_108503592_108503724_108504361
ENSMUSG00000058070.15_108482748_108505823_1	chr12	+	2416	10	ISM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	93673	0	93673	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTATTGACCTACGTT	NA	NA	NA	NA	NA	NA	NA	NA	108482747	108505823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562_108496652_108500912_108501011_108501123_108501212_108502485_108502582_108503592_108503724_108504361
ENSMUSG00000058070.15_108482819_108505823_1	chr12	+	2345	10	ISM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	93744	0	93744	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTATTGACCTACGTT	NA	NA	NA	NA	NA	NA	NA	NA	108482818	108505823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562_108496652_108500912_108501011_108501123_108501212_108502485_108502582_108503592_108503724_108504361
ENSMUSG00000058076.13_170956026_170963632_1	chr1	-	1520	2	ISM	ENSMUSG00000058076.13	ENSMUST00000081560.5	815	5	14528	-950	14528	950	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGCTGGGTGGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	170963632	170956025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_170957475_170963561
ENSMUSG00000058076.13_170956086_170963683_1	chr1	-	1511	2	ISM	ENSMUSG00000058076.13	ENSMUST00000081560.5	815	5	14477	-890	14477	890	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCCCCACCACCAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	170963683	170956085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_170957475_170963561
ENSMUSG00000058076.13_170956187_170966324_1	chr1	-	1514	3	ISM	ENSMUSG00000058076.13	ENSMUST00000081560.5	815	5	11836	-789	11836	789	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTGCTATTTTGATAGA	NA	NA	NA	NA	NA	NA	NA	NA	170966324	170956186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_170957475_170963561_170963726_170966262
ENSMUSG00000058076.13_170956321_170978160_1	chr1	-	1572	6	FSM	ENSMUSG00000058076.13	ENSMUST00000111336.10	3171	6	12	1587	0	655	multi-exon	TRUE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAACGTTGCTTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	170978160	170956320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324_170973382_170978127
ENSMUSG00000058135.13_107919571_107925289_1	chr3	-	1283	8	NNC	ENSMUSG00000058135.13	novel	1289	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2059	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTGTCTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	107925289	107919570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107920095_107922068_107922180_107922260_107922351_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
ENSMUSG00000058135.13_107919571_107925289_2	chr3	-	1283	8	NNC	ENSMUSG00000058135.13	novel	1289	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2058	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTGTCTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	107925289	107919570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924672_107924743_107925055
ENSMUSG00000058135.13_107919571_107925289_3	chr3	-	1280	8	NNC	ENSMUSG00000058135.13	novel	1289	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2058	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTGTCTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	107925289	107919570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_107920086_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
ENSMUSG00000058153.16_112572488_112610805_1	chr5	-	1030	7	ISM	ENSMUSG00000058153.16	ENST00000360929.7	2116	13	12219	0	12219	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTCCTACTGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	112610805	112572487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_112572592_112573479_112573595_112576241_112576437_112586267_112586463_112588679_112588877_112609012_112609152_112610720
ENSMUSG00000058153.16_112572488_112619559_1	chr5	-	1762	11	ISM	ENSMUSG00000058153.16	ENST00000629590.2	2308	14	3465	0	3465	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTCCTACTGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	112619559	112572487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_112572592_112573479_112573595_112576241_112576437_112584148_112584341_112586267_112586463_112588679_112588877_112609012_112609152_112610720_112610916_112612438_112612606_112613811_112613978_112619462
ENSMUSG00000058153.16_112573478_112586290_1	chr5	-	329	3	ISM	ENSMUSG00000058153.16	ENSMUST00000212758.2	2664	15	138444	3603	36734	-990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGGGTTGTGCCGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	112586290	112573477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_112573592_112584148_112584341_112586267
ENSMUSG00000058153.16_112573525_112586349_1	chr5	-	341	3	ISM	ENSMUSG00000058153.16	ENSMUST00000212758.2	2664	15	138385	3650	36675	-1037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATCTCCTTGCTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	112586349	112573524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_112573592_112584148_112584341_112586267
ENSMUSG00000058153.16_112576294_112620686_1	chr5	-	1670	10	ISM	ENSMUSG00000058153.16	ENST00000529632.6	2302	14	2338	3806	2338	-3806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTCTGGGACAGCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	112620686	112576293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_112576437_112584148_112584341_112586267_112586463_112588679_112588877_112609012_112609152_112610720_112610916_112612438_112612606_112613811_112613978_112619462_112619649_112620596
ENSMUSG00000058153.16_112576350_112620739_1	chr5	-	1667	10	ISM	ENSMUSG00000058153.16	ENST00000529632.6	2302	14	2285	3862	2285	-3862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCACCTTCATGTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	112620739	112576349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_112576437_112584148_112584341_112586267_112586463_112588679_112588877_112609012_112609152_112610720_112610916_112612438_112612606_112613811_112613978_112619462_112619649_112620596
ENSMUSG00000058153.16_112576362_112613911_1	chr5	-	1068	7	ISM	ENSMUSG00000058153.16	ENST00000360929.7	2116	13	9113	3874	9113	-3874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCGGAGAGTCCCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	112613911	112576361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_112576437_112586267_112586463_112588679_112588877_112609012_112609152_112610720_112610916_112612438_112612606_112613811
ENSMUSG00000058153.16_112584283_112622993_1	chr5	-	1729	11	ISM	ENSMUSG00000058153.16	ENST00000343706.8	2113	13	31	11795	31	-11795	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGCTAGTGGGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	112622993	112584282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_112584341_112586267_112586463_112588679_112588877_112609012_112609152_112610720_112610916_112612438_112612606_112613811_112613978_112619462_112619649_112620596_112620790_112621283_112621418_112622894
ENSMUSG00000058153.16_112619522_112621316_1	chr5	-	353	3	ISM	ENSMUSG00000058153.16	ENST00000343706.8	2113	13	1708	47034	1708	-47034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACCTGCATCAATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	112621316	112619521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_112619649_112620596_112620790_112621283
ENSMUSG00000058240.15_91486230_91525589_2	chr16	-	1626	12	FSM	ENSMUSG00000058240.15	ENSMUST00000117644.8	1727	12	101	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTTTTTAAATATTCA	NA	NA	NA	NA	NA	NA	NA	NA	91525589	91486229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000058240.15_91486494_91509155_1	chr16	-	1113	10	ISM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	16708	284	5202	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGGGGACATTCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	91509155	91486493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082
ENSMUSG00000058240.15_91486605_91511669_1	chr16	-	1036	11	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	2688	-111	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTTTTAAGCCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	91511669	91486604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_91486804_91487591_91487626_91489473_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636
ENSMUSG00000058240.15_91486752_91525488_1	chr16	-	1048	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	375	542	8	-258	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGTTCAGAAAAATCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	91525488	91486751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000058240.15_91487623_91525589_1	chr16	-	1066	12	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	0	-1129	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGAGAAGTTATCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	91525589	91487622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_91487629_91489477_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000058240.15_91489571_91525690_1	chr16	-	1068	11	ISM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	173	3361	0	-496	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTTCCTCAAGGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	91525690	91489570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000058240.15_91492201_91525863_1	chr16	-	1048	9	ISM	ENSMUSG00000058240.15	ENSMUST00000114023.3	1154	10	-274	975	0	-975	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGGAGGAAACAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	91525863	91492200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000058248.13_191873353_192188078_1	chr1	+	1430	7	FSM	ENSMUSG00000058248.13	ENST00000640044.1	1818	7	37	351	37	-351	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAGAAGACAGACTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	191873352	192188078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_191873395_191903640_191903765_191907152_191907260_192095324_192095525_192100990_192101244_192117030_192117228_192187571
ENSMUSG00000058248.13_191903736_192188190_1	chr1	+	1405	6	ISM	ENSMUSG00000058248.13	ENST00000640044.1	1818	7	30420	239	30420	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTCTTTCTACCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	191903735	192188190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191903765_191907152_191907260_192095324_192095525_192100990_192101244_192117030_192117228_192187571
ENSMUSG00000058248.13_191907234_192188300_1	chr1	+	1405	5	ISM	ENSMUSG00000058248.13	ENST00000640044.1	1818	7	33918	129	33918	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCAGCTGTCTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	191907233	192188300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_191907260_192095324_192095525_192100990_192101244_192117030_192117228_192187571
ENSMUSG00000058248.13_192095325_192188429_1	chr1	+	1508	4	ISM	ENSMUSG00000058248.13	ENST00000640044.1	1818	7	222009	0	222009	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGATCATTTCAAAACACA	NA	NA	NA	NA	NA	NA	NA	NA	192095324	192188429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_192095525_192100990_192101244_192117030_192117228_192187571
ENSMUSG00000058254.13_10451779_10462173_1	chrX	+	578	4	ISM	ENSMUSG00000058254.13	ENSMUST00000076354.13	1733	8	100382	671	100382	-671	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTACTTGGTCCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	10451778	10462173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_10451892_10456374_10456459_10461517_10461594_10461868
ENSMUSG00000058254.13_10461552_10462412_1	chrX	+	586	2	ISM	ENSMUSG00000058254.13	ENSMUST00000076354.13	1733	8	110155	432	110155	-432	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACAGTGGGAGGGATTC	NA	NA	NA	NA	NA	NA	NA	NA	10461551	10462412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_10461594_10461868
ENSMUSG00000058258.15_8935537_8936941_1	chr13	+	670	2	ISM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	0	5546	0	-5546	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTCTTAAAGTATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	8935536	8936941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_8936033_8936767
ENSMUSG00000058258.15_8935671_8938009_1	chr13	+	679	4	ISM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	134	4478	134	-4478	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGAGAACAACGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	8935670	8938009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958
ENSMUSG00000058258.15_8935745_8938037_1	chr13	+	633	4	ISM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	208	4450	208	-4450	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAGCAGCAAAGCGGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	8935744	8938037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958
ENSMUSG00000058258.15_8935805_8938080_1	chr13	+	616	4	ISM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	268	4407	268	-4407	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAAGAGGTACCCGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	8935804	8938080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958
ENSMUSG00000058258.15_8935979_8940481_1	chr13	+	579	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	442	2006	442	-2006	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACGAGATTAAAAGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	8935978	8940481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
ENSMUSG00000058258.15_8937556_8940797_1	chr13	+	633	3	ISM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	2019	1690	2019	-1690	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGCTTACAGTTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	8937555	8940797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_8937614_8937958_8938090_8940353
ENSMUSG00000058258.15_8938072_8940965_1	chr13	+	630	2	ISM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	2535	1522	2535	-1522	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATAGACACTTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	8938071	8940965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_8938090_8940353
ENSMUSG00000058267.14_160022873_160028610_1	chr1	+	1781	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	88	1130	0	-1130	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTACTGTTCTTCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	160022872	160028610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_160022882_160024515_160024675_160026997
ENSMUSG00000058267.14_160024553_160028716_1	chr1	+	1841	2	ISM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	1768	1024	1680	-1024	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCCTCCAGCAACCACAA	NA	NA	NA	NA	NA	NA	NA	NA	160024552	160028716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_160024675_160026997
ENSMUSG00000058291.15_138605512_138615429_1	chr5	-	902	4	ISM	ENSMUSG00000058291.15	ENSMUST00000085852.11	3318	5	2591	2266	2573	-1130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACCCTTTTATTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	138615429	138605511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_138606084_138610085_138610176_138610300_138610428_138615316
ENSMUSG00000058298.11_53413511_53489048_1	chr10	-	1732	8	ISM	ENSMUSG00000058298.11	ENST00000619706.5	2754	12	13073	112	13073	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCACCCTCTCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	53489048	53413510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_53414186_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922
ENSMUSG00000058298.11_53413704_53492099_1	chr10	-	1691	9	ISM	ENSMUSG00000058298.11	ENST00000619706.5	2754	12	10022	305	10022	-305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAAGCTTCTCCTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	53492099	53413703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_53414186_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947
ENSMUSG00000058298.11_53413934_53498951_1	chr10	-	1692	11	ISM	ENSMUSG00000058298.11	ENST00000619706.5	2754	12	3170	535	3170	-535	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCTGACCAGCTGCACG	NA	NA	NA	NA	NA	NA	NA	NA	53498951	53413933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_53414186_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851
ENSMUSG00000058298.11_53414121_53499134_1	chr10	-	1688	11	ISM	ENSMUSG00000058298.11	ENST00000619706.5	2754	12	2987	722	2987	-722	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGCCAAATTCACATTT	NA	NA	NA	NA	NA	NA	NA	NA	53499134	53414120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_53414186_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851
ENSMUSG00000058298.11_53417112_53501967_1	chr10	-	1735	11	ISM	ENSMUSG00000058298.11	ENST00000619706.5	2754	12	154	3713	154	-3713	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGGCAGTGTGAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	53501967	53417111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811
ENSMUSG00000058317.13_3882696_3896119_1	chr14	+	965	2	ISM	ENSMUSG00000058317.13	ENSMUST00000076133.10	606	5	301441	-717	301441	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTCTGTACCAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	3882695	3896119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_3882846_3895304
ENSMUSG00000058351.12_30810616_30850686_1	chr14	-	607	4	FSM	ENSMUSG00000058351.12	ENSMUST00000064032.10	791	4	184	0	62	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCCATCATTCTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	30850686	30810615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_30810984_30845678_30845733_30846478_30846567_30850589
ENSMUSG00000058355.9_80410956_80412606_1	chr8	-	984	2	ISM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	25763	865	25763	-865	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGACACTCTGGCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	80412606	80410955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_80411907_80412573
ENSMUSG00000058355.9_80411092_80414104_1	chr8	-	962	3	ISM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	24265	1001	24265	-1001	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGACCATATTTGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	80414104	80411091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_80411907_80412573_80412686_80414069
ENSMUSG00000058355.9_80411224_80414320_1	chr8	-	946	4	ISM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	24049	1133	24049	-1133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTACTTTTATAAATATATA	NA	NA	NA	NA	NA	NA	NA	NA	80414320	80411223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292
ENSMUSG00000058355.9_80411346_80414547_1	chr8	-	963	5	ISM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	23822	1255	23822	-1255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTATGCATTGTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	80414547	80411345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523
ENSMUSG00000058355.9_80411578_80416903_1	chr8	-	975	8	ISM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	21466	1487	21466	-1487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAATGCTTCCTGGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	80416903	80411577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865
ENSMUSG00000058355.9_80411642_80416942_1	chr8	-	950	8	ISM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	21427	1551	21427	-1551	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTTACCTCCAGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	80416942	80411641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865
ENSMUSG00000058355.9_80411829_80420135_1	chr8	-	991	9	ISM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	18234	1738	18234	-1738	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGATTTTTATCATATA	NA	NA	NA	NA	NA	NA	NA	NA	80420135	80411828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052
ENSMUSG00000058355.9_80412573_80426065_1	chr8	-	1043	9	ISM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	12304	2482	12304	-2482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGTGGAAATAAACATACA	NA	NA	NA	NA	NA	NA	NA	NA	80426065	80412572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975
ENSMUSG00000058355.9_80414070_80427311_1	chr8	-	1027	9	ISM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	11058	3979	11058	-3979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAAAAAAATGCTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	80427311	80414069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214
ENSMUSG00000058355.9_80414378_80427805_1	chr8	-	951	10	ISM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	10564	4287	10564	-4287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCTGACGTCTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	80427805	80414377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743
ENSMUSG00000058355.9_80414584_80428462_1	chr8	-	969	10	ISM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	9907	4493	9907	-4493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCAGTTTGTGACTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	80428462	80414583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402
ENSMUSG00000058355.9_80415936_80429730_1	chr8	-	1016	9	ISM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	8639	5845	8639	-5845	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTCATGTAAACATTCC	NA	NA	NA	NA	NA	NA	NA	NA	80429730	80415935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632
ENSMUSG00000058355.9_80416979_80435071_1	chr8	-	948	10	ISM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	3298	6888	3298	-6888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCATGTATAAATATC	NA	NA	NA	NA	NA	NA	NA	NA	80435071	80416978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051
ENSMUSG00000058355.9_80417034_80435117_1	chr8	-	939	10	ISM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	3252	6943	3252	-6943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCGTCGCTTGTTTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	80435117	80417033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051
ENSMUSG00000058355.9_80420052_80438279_1	chr8	-	1058	10	ISM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	90	9961	90	-9961	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTGAAAACCTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	80438279	80420051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ENSMUSG00000058388.15_103875762_103905009_1	chr3	+	2029	13	ISM	ENSMUSG00000058388.15	ENSMUST00000063717.14	3327	19	188	9795	0	-9795	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATAAGCAGGTGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	103875761	103905009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748
ENSMUSG00000058392.14_32275802_32280667_1	chr17	+	1980	4	ISM	ENSMUSG00000058392.14	ENSMUST00000081339.13	4874	16	20728	1172	20728	-1172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGATTTCTCTGTGTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	32275801	32280667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_32276231_32277497_32277639_32278247_32278312_32279321
ENSMUSG00000058392.14_32276095_32280964_1	chr17	+	1984	4	ISM	ENSMUSG00000058392.14	ENSMUST00000081339.13	4874	16	21021	875	21021	-875	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCATGGTTACAGCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	32276094	32280964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_32276231_32277497_32277639_32278247_32278312_32279321
ENSMUSG00000058392.14_32277534_32281138_1	chr17	+	1986	3	ISM	ENSMUSG00000058392.14	ENSMUST00000081339.13	4874	16	22460	701	22460	-701	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGTAGAGCAAGACACCA	NA	NA	NA	NA	NA	NA	NA	NA	32277533	32281138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_32277639_32278247_32278312_32279321
ENSMUSG00000058407.13_38026477_38036974_1	chr1	-	1690	5	NNC	ENSMUSG00000058407.13	novel	1699	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCACATGTCTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38036974	38026476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034916_38036244
ENSMUSG00000058407.13_38033127_38036305_1	chr1	-	390	3	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	91	8857	19	-6403	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTCAAGGAGAGTGAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	38036305	38033126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_38033192_38034713_38034923_38036189
ENSMUSG00000058407.13_38033162_38036344_1	chr1	-	394	3	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	52	8892	-20	-6438	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAATCGGCAGCGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	38036344	38033161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_38033192_38034713_38034923_38036189
ENSMUSG00000058420.9_117980600_118009244_1	chr7	-	930	3	ISM	ENSMUSG00000058420.9	ENSMUST00000081574.8	2764	8	33539	660	33539	-657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAAGTATCTTTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	118009244	117980599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_117981276_118007247_118007404_118009146
ENSMUSG00000058420.9_117980732_118033143_1	chr7	-	909	4	ISM	ENSMUSG00000058420.9	ENSMUST00000081574.8	2764	8	9640	792	9640	-789	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACCAAGAGTTCAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	118033143	117980731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_117981276_118007247_118007404_118009146_118009268_118033055
ENSMUSG00000058420.9_117981072_118033512_1	chr7	-	938	4	ISM	ENSMUSG00000058420.9	ENSMUST00000081574.8	2764	8	9271	1132	9271	-1129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGGCAACCTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	118033512	117981071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_117981276_118007247_118007404_118009146_118009268_118033055
ENSMUSG00000058420.9_117981137_118033573_1	chr7	-	934	4	ISM	ENSMUSG00000058420.9	ENSMUST00000081574.8	2764	8	9210	1197	9210	-1194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGGTCCCGGGCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	118033573	117981136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_117981276_118007247_118007404_118009146_118009268_118033055
ENSMUSG00000058420.9_118033310_118047279_1	chr7	-	930	5	ISM	ENSMUSG00000058420.9	ENSMUST00000203796.4	2957	8	163	53367	163	-26372	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTCCTGCCTGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	118047279	118033309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_118033676_118036045_118036195_118041570_118041720_118042341_118042365_118047036
ENSMUSG00000058440.15_30048030_30153462_1	chr6	+	2915	12	FSM	ENSMUSG00000058440.15	ENST00000393232.6	2929	12	22	-8	0	4	multi-exon	TRUE	canonical	NA	NA	NA	NA	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCCTCTCTCTAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	30048029	30153462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_30048113_30089916_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512_30152384_30152855
ENSMUSG00000058440.15_30048030_30153462_2	chr6	+	2913	12	NNC	ENSMUSG00000058440.15	novel	2929	12	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCCTCTCTCTAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	30048029	30153462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_30048113_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126238_30126359_30151512_30152384_30152855
ENSMUSG00000058440.15_30048030_30153462_3	chr6	+	2912	12	NNC	ENSMUSG00000058440.15	novel	2929	12	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCCTCTCTCTAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	30048029	30153462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_30048113_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115017_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512_30152384_30152855
ENSMUSG00000058440.15_30048030_30153462_4	chr6	+	2913	12	NNC	ENSMUSG00000058440.15	novel	2929	12	NA	NA	0	4	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	2298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCCTCTCTCTAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	30048029	30153462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_30048113_30089916_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512_30152384_30152857
ENSMUSG00000058440.15_30115009_30144653_1	chr6	+	819	6	ISM	ENSMUSG00000058440.15	ENSMUST00000069808.13	1658	10	25121	201	25096	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGGAAAGGGATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	30115008	30144653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
ENSMUSG00000058440.15_30115071_30144696_1	chr6	+	800	6	ISM	ENSMUSG00000058440.15	ENSMUST00000069808.13	1658	10	25183	158	25158	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATCTTAAAGAGGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	30115070	30144696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
ENSMUSG00000058440.15_30115111_30140243_1	chr6	+	672	6	ISM	ENSMUSG00000058440.15	ENST00000353868.5	2888	12	25198	13215	25198	-4611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATCCTGGCAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	30115110	30140243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
ENSMUSG00000058440.15_30116256_30151712_1	chr6	+	678	6	ISM	ENSMUSG00000058440.15	ENST00000353868.5	2888	12	26343	1746	26343	36	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAATTTTTTACATGTT	NA	NA	NA	NA	NA	NA	NA	NA	30116255	30151712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214_30140271_30151512
ENSMUSG00000058440.15_30119001_30151909_1	chr6	+	683	4	ISM	ENSMUSG00000058440.15	ENST00000353868.5	2888	12	29088	1549	29088	233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGACTTCTTTGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	30119000	30151909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_30119106_30126233_30126359_30140214_30140271_30151512
ENSMUSG00000058440.15_30119057_30151967_1	chr6	+	685	4	ISM	ENSMUSG00000058440.15	ENST00000353868.5	2888	12	29144	1491	29144	291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATGTATATGTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	30119056	30151967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_30119106_30126233_30126359_30140214_30140271_30151512
ENSMUSG00000058441.8_88944419_88953790_1	chr15	+	1602	3	FSM	ENSMUSG00000058441.8	ENSMUST00000162424.2	3391	3	469	1320	142	-291	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCCATCTGGGGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	88944418	88953790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_88944503_88951760_88953225_88953736
ENSMUSG00000058441.8_88952056_88954175_1	chr15	+	1608	2	ISM	ENSMUSG00000058441.8	ENSMUST00000161372.2	2314	4	8119	-94	7779	94	intron_retention	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACTGCCCACACACACCC	NA	NA	NA	NA	NA	NA	NA	NA	88952055	88954175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88953225_88953736
ENSMUSG00000058441.8_88952309_88954464_1	chr15	+	1644	2	ISM	ENSMUSG00000058441.8	ENST00000159647.9	2898	5	8032	643	8032	383	intron_retention	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACAGACCCCCAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	88952308	88954464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88953225_88953736
ENSMUSG00000058441.8_88952670_88954806_1	chr15	+	1625	2	ISM	ENSMUSG00000058441.8	ENST00000159647.9	2898	5	8393	301	8393	-301	intron_retention	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTGTGAGTGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	88952669	88954806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88953225_88953736
ENSMUSG00000058441.8_88952774_88954957_1	chr15	+	1594	3	ISM	ENSMUSG00000058441.8	ENST00000395842.3	2983	4	8497	150	8497	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCCCCCGGGTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	88952773	88954957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88953225_88953736_88954829_88954906
ENSMUSG00000058441.8_88952913_88955110_1	chr15	+	1608	3	ISM	ENSMUSG00000058441.8	ENST00000395842.3	2983	4	8636	-3	8636	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTTGAGGCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	88952912	88955110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88953225_88953736_88954829_88954906
ENSMUSG00000058441.8_88953023_88955110_1	chr15	+	1498	3	ISM	ENSMUSG00000058441.8	ENST00000395842.3	2983	4	8746	-3	8746	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTTGAGGCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	88953022	88955110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_88953225_88953736_88954829_88954906
ENSMUSG00000058444.9_63071050_63201003_1	chr9	-	1007	12	ISM	ENSMUSG00000058444.9	ENST00000395476.6	1638	21	83541	-2	2424	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	63201003	63071049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977
ENSMUSG00000058444.9_63071401_63203230_1	chr9	-	819	14	FSM	ENSMUSG00000058444.9	ENST00000340972.8	1365	14	197	349	197	-349	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGAGGCGGAGCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	63203230	63071400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201079_63203172
ENSMUSG00000058444.9_63071407_63245400_1	chr9	-	881	16	ISM	ENSMUSG00000058444.9	ENST00000395476.6	1638	21	39144	355	39144	-355	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTAGAGGAGAGGCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	63245400	63071406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366
ENSMUSG00000058444.9_63071441_63203299_1	chr9	-	848	14	FSM	ENSMUSG00000058444.9	ENST00000340972.8	1365	14	128	389	128	-389	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCACTGTGGTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	63203299	63071440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201079_63203172
ENSMUSG00000058444.9_63101483_63246405_1	chr9	-	893	16	ISM	ENSMUSG00000058444.9	ENST00000395476.6	1638	21	38139	30431	38139	-30431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGAGTCTTCTCTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	63246405	63101482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362
ENSMUSG00000058444.9_63104593_63250738_1	chr9	-	914	16	ISM	ENSMUSG00000058444.9	ENST00000395476.6	1638	21	33806	33541	33806	-33541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCACCACCCCCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	63250738	63104592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63104655_63124274_63124308_63124620_63124648_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668
ENSMUSG00000058444.9_63124274_63265342_1	chr9	-	921	16	ISM	ENSMUSG00000058444.9	ENST00000395476.6	1638	21	19202	53222	19202	-53222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCATCGTCTTATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	63265342	63124273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_63124308_63124620_63124648_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274
ENSMUSG00000058454.16_143377059_143395045_1	chr7	+	903	6	ISM	ENSMUSG00000058454.16	ENSMUST00000073878.12	2815	9	155	7101	155	-6349	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGCCGTGTCCACGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	143377058	143395045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_143377278_143383875_143384003_143390374_143390467_143391498_143391722_143394169_143394261_143394894
ENSMUSG00000058486.12_34857361_34868429_1	chr6	-	1335	7	ISM	ENSMUSG00000058486.12	ENST00000683848.1	2124	14	18050	-376	18050	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	34868429	34857360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321
ENSMUSG00000058486.12_34857472_34869364_1	chr6	-	1356	8	ISM	ENSMUSG00000058486.12	ENST00000683848.1	2124	14	17115	-265	17115	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCGCACCCTGTTCGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	34869364	34857471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275
ENSMUSG00000058486.12_34857543_34869404_1	chr6	-	1325	8	ISM	ENSMUSG00000058486.12	ENST00000683848.1	2124	14	17075	-194	17075	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGAACCGTGGCTATAGC	NA	NA	NA	NA	NA	NA	NA	NA	34869404	34857542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275
ENSMUSG00000058486.12_34857737_34887652_1	chr6	-	2139	15	NNC	ENSMUSG00000058486.12	novel	2251	15	NA	NA	110	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGCCCGGCTGACACGGC	NA	NA	NA	NA	NA	NA	NA	NA	34887652	34857736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869464_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883665_34885056_34885257_34886295_34886476_34887631
ENSMUSG00000058486.12_34857737_34887771_1	chr6	-	2260	15	FSM	ENSMUSG00000058486.12	ENST00000354475.5	2251	15	-9	0	-9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGCCCGGCTGACACGGC	NA	NA	NA	NA	NA	NA	NA	NA	34887771	34857736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869464_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
ENSMUSG00000058486.12_34857810_34887771_1	chr6	-	2185	15	NNC	ENSMUSG00000058486.12	novel	2251	15	NA	NA	-9	-73	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGACGTGCCTCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	34887771	34857809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869464_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883665_34885056_34885257_34886295_34886476_34887631
ENSMUSG00000058486.12_34857810_34887811_1	chr6	-	2225	15	NNC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	0	-73	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGACGTGCCTCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	34887811	34857809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869464_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883665_34885056_34885257_34886295_34886476_34887631
ENSMUSG00000058486.12_34857810_34887811_2	chr6	-	2227	15	FSM	ENSMUSG00000058486.12	ENST00000354475.5	2251	15	-49	73	0	-73	multi-exon	FALSE	canonical	NA	NA	NA	NA	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGACGTGCCTCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	34887811	34857809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869464_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
ENSMUSG00000058498.13_152391476_152402915_1	chr4	-	2316	17	FSM	ENSMUSG00000058498.13	ENSMUST00000076183.12	2466	17	150	0	150	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAGTACAGTGATCACT	NA	NA	NA	NA	NA	NA	NA	NA	152402915	152391475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_152392074_152393294_152393361_152395840_152395959_152396228_152396281_152396527_152396714_152396846_152397034_152397643_152397742_152397820_152397890_152398335_152398405_152398492_152398566_152399498_152399546_152399848_152399975_152400059_152400136_152400207_152400290_152400375_152400521_152402117_152402251_152402724
ENSMUSG00000058503.12_3604638_3611089_1	chr5	+	493	7	ISM	ENSMUSG00000058503.12	ENST00000464802.1	639	9	0	7956	0	-7956	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTATTTTTACATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	3604637	3611089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038
ENSMUSG00000058503.12_3607743_3614327_1	chr5	+	482	7	ISM	ENSMUSG00000058503.12	ENST00000464802.1	639	9	3105	4718	3105	-4718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGTAAAAACAAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	3607742	3614327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240
ENSMUSG00000058503.12_3608471_3619045_1	chr5	+	463	7	ISM	ENSMUSG00000058503.12	ENST00000464802.1	639	9	3833	0	3833	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAGCTCCAGCTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	3608470	3619045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3618986
ENSMUSG00000058546.9_78071761_78073761_1	chr11	-	443	4	ISM	ENSMUSG00000058546.9	ENSMUST00000102483.5	560	5	649	0	649	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGCTTGTCATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	78073761	78071760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628
ENSMUSG00000058546.9_78071980_78073761_1	chr11	-	380	3	ISM	ENSMUSG00000058546.9	ENSMUST00000102483.5	560	5	649	219	649	-219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCATAATCATTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	78073761	78071979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78072050_78072242_78072420_78073628
ENSMUSG00000058546.9_78072293_78074410_1	chr11	-	377	3	ISM	ENSMUSG00000058546.9	ENSMUST00000102483.5	560	5	0	532	0	-532	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1716	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAGAAACTCTATGACAT	NA	NA	NA	NA	NA	NA	NA	NA	78074410	78072292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_78072420_78073628_78073813_78074344
ENSMUSG00000058558.13_108048438_108051588_1	chr5	+	453	5	ISM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	70	5283	70	-5283	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGAATACAATGTGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	108048437	108051588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531
ENSMUSG00000058558.13_108049987_108052694_1	chr5	+	467	4	ISM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	1619	4177	1619	-4177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATGAAGATGCGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	108049986	108052694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108050004_108051134_108051270_108051531_108051735_108052582
ENSMUSG00000058558.13_108051605_108055794_1	chr5	+	429	4	ISM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	3237	1077	3237	-1077	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	946	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGATCGGGTTGCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	108051604	108055794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108051735_108052582_108052761_108055054_108055144_108055762
ENSMUSG00000058558.13_108051659_108055921_1	chr5	+	502	4	ISM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	3291	950	3291	-950	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1576	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGCTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	108051658	108055921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108051735_108052582_108052761_108055054_108055144_108055762
ENSMUSG00000058558.13_108051665_108055921_1	chr5	+	490	4	NNC	ENSMUSG00000058558.13	novel	2045	8	NA	NA	3297	-950	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGCTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	108051664	108055921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_108051735_108052582_108052761_108055060_108055144_108055762
ENSMUSG00000058558.13_108051716_108055921_1	chr5	+	445	4	ISM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	3348	950	3348	-950	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1017	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGCTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	108051715	108055921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108051735_108052582_108052761_108055054_108055144_108055762
ENSMUSG00000058558.13_108055083_108056085_1	chr5	+	384	2	ISM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	6715	786	6715	-786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTTTCTCCAGGAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	108055082	108056085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108055144_108055762
ENSMUSG00000058558.13_108055127_108056167_1	chr5	+	422	2	ISM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	6759	704	6759	-704	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCTTATCTTTCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	108055126	108056167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_108055144_108055762
ENSMUSG00000058569.9_55740982_55776972_1	chr13	+	1480	6	NNC	ENSMUSG00000058569.9	novel	1420	5	NA	NA	0	31462	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAACAAACCTTAAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	55740981	55776972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_55741171_55741313_55741415_55742517_55742644_55743280_55743428_55744653_55745513_55776914
ENSMUSG00000058587.10_75405592_75412222_1	chr9	-	1942	2	ISM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	54717	603	54654	-603	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGTATGTCTACATGAA	NA	NA	NA	NA	NA	NA	NA	NA	75412222	75405591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_75407433_75412121
ENSMUSG00000058587.10_75405758_75414806_1	chr9	-	1964	3	ISM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	52133	769	52070	-769	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTGTAATAGTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	75414806	75405757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_75407433_75412121_75412267_75414662
ENSMUSG00000058587.10_75405868_75416666_1	chr9	-	1925	4	ISM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	50273	879	50210	-879	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATAATGGAGAACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	75416666	75405867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595
ENSMUSG00000058587.10_75405982_75418493_1	chr9	-	1934	5	ISM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	48446	993	48383	-993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACGGTTGCTTAAACCATG	NA	NA	NA	NA	NA	NA	NA	NA	75418493	75405981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407
ENSMUSG00000058587.10_75406187_75423837_1	chr9	-	1947	7	ISM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	43102	1198	43039	-1198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAGGTTATCTCTATCA	NA	NA	NA	NA	NA	NA	NA	NA	75423837	75406186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754
ENSMUSG00000058587.10_75406331_75436730_1	chr9	-	1923	8	ISM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	30209	1342	30146	-1342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGTACTGCCTAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	75436730	75406330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650
ENSMUSG00000058587.10_75406619_75466876_1	chr9	-	1974	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	63	1630	0	-1630	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAGGCGCTGTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	75466876	75406618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ENSMUSG00000058594.16_11747386_11772371_1	chr2	-	3109	19	ISM	ENSMUSG00000058594.16	ENSMUST00000071564.14	3567	21	10022	0	10022	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	11772371	11747385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932
ENSMUSG00000058594.16_11747386_11772438_1	chr2	-	3176	19	ISM	ENSMUSG00000058594.16	ENSMUST00000071564.14	3567	21	9955	0	9955	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	11772438	11747385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932
ENSMUSG00000058594.16_11747732_11782318_1	chr2	-	3146	21	FSM	ENSMUSG00000058594.16	ENSMUST00000071564.14	3567	21	75	346	75	-346	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGGAAGACATAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	11782318	11747731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ENSMUSG00000058600.14_34441450_34443383_1	chr15	-	311	4	ISM	ENSMUSG00000058600.14	ENSMUST00000079735.12	886	5	403	799	-15	-794	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAATATTGAACTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	34443383	34441449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_34441509_34442780_34442927_34443170_34443224_34443330
ENSMUSG00000058600.14_34442776_34443406_1	chr15	-	280	3	ISM	ENSMUSG00000058600.14	ENSMUST00000079735.12	886	5	380	2125	-38	-2120	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGAACCTGGATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	34443406	34442775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_34442927_34443170_34443224_34443330
ENSMUSG00000058600.14_34442876_34443490_1	chr15	-	264	3	ISM	ENSMUSG00000058600.14	ENSMUST00000079735.12	886	5	296	2225	-122	-2220	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGTACGTGCTGGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	34443490	34442875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_34442927_34443170_34443224_34443330
ENSMUSG00000058624.14_21372551_21387303_1	chr19	-	446	5	ISM	ENSMUSG00000058624.14	ENSMUST00000237823.2	3475	14	30920	2132	30920	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTGGACATCTGCGACA	NA	NA	NA	NA	NA	NA	NA	NA	21387303	21372550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_21372623_21373396_21373425_21374870_21375002_21377922_21378070_21387235
ENSMUSG00000058624.14_21374944_21392221_1	chr19	-	415	5	ISM	ENSMUSG00000058624.14	ENSMUST00000237823.2	3475	14	26002	4525	26002	-2393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATCAACCCCAGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	21392221	21374943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_21375002_21377922_21378070_21387235_21387304_21389861_21389960_21392177
ENSMUSG00000058624.14_21377986_21400430_1	chr19	-	455	6	ISM	ENSMUSG00000058624.14	ENST00000376986.5	1337	13	49507	5435	17793	-5435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATGAGAAAAACCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	21400430	21377985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_21378070_21387235_21387304_21389861_21389960_21392177_21392286_21396737_21396766_21400361
ENSMUSG00000058624.14_21389934_21405889_1	chr19	-	403	6	ISM	ENSMUSG00000058624.14	ENST00000376986.5	1337	13	44048	17383	12334	-17383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTGAAGAAGAACTTAACA	NA	NA	NA	NA	NA	NA	NA	NA	21405889	21389933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_21389960_21392177_21392286_21396737_21396766_21400361_21400468_21402894_21402983_21405842
ENSMUSG00000058624.14_21400431_21449792_1	chr19	-	447	5	ISM	ENSMUSG00000058624.14	ENSMUST00000087600.10	5428	14	244	31760	145	-27880	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGATTTGAATGATACTG	NA	NA	NA	NA	NA	NA	NA	NA	21449792	21400430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_21400468_21402894_21402983_21405842_21406015_21411584_21411674_21449731
ENSMUSG00000058638.15_12568964_12582548_1	chr7	+	1359	8	FSM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	276	1956	276	-1304	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCCAAGTCTCAAGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	12568963	12582548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ENSMUSG00000058638.15_12578395_12582981_1	chr7	+	1324	4	ISM	ENSMUSG00000058638.15	ENSMUST00000168247.2	2499	7	8985	871	8985	-871	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATGTTACAAGGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	12578394	12582981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12578833_12580722_12580824_12581898_12582026_12582323
ENSMUSG00000058638.15_12578490_12583064_1	chr7	+	1312	4	ISM	ENSMUSG00000058638.15	ENSMUST00000168247.2	2499	7	9080	788	9080	-788	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCCTTACCTGTAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	12578489	12583064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_12578833_12580722_12580824_12581898_12582026_12582323
ENSMUSG00000058655.10_101982299_102004232_1	chr15	+	2387	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	91	1376	0	-1376	multi-exon	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGCTGTTTTAGTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	101982298	102004232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUSG00000058655.10_101992595_102004418_1	chr15	+	2336	13	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	10387	1190	10296	-1190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAAAGCTTTGGGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	101992594	102004418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUSG00000058655.10_101993115_102004538_1	chr15	+	2245	12	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	10907	1070	10816	-1070	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGAGAAGGCCTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	101993114	102004538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUSG00000058655.10_101993155_102004599_1	chr15	+	2266	12	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	10947	1009	10856	-1009	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTATTTTGAAAACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	101993154	102004599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUSG00000058655.10_101993206_102004649_1	chr15	+	2265	12	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	10998	959	10907	-959	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGCCTCCCAGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	101993205	102004649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUSG00000058655.10_101994459_102004786_1	chr15	+	2356	11	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	12251	822	12160	-822	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCTCCTGCAGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	101994458	102004786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUSG00000058655.10_101997318_102005060_1	chr15	+	2297	8	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	15110	548	15019	-548	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACCTGTCTGCTTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	101997317	102005060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUSG00000058655.10_101997384_102005095_1	chr15	+	2266	8	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	15176	513	15085	-513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGCTCCAAAGATGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	101997383	102005095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUSG00000058655.10_101997399_102005184_1	chr15	+	2340	8	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	15191	424	15100	-424	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGATGTCCCGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	101997398	102005184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUSG00000058655.10_101998390_102005292_1	chr15	+	2292	7	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	16182	316	16091	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTTTTTTAAACCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	101998389	102005292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUSG00000058655.10_101999853_102005447_1	chr15	+	2286	6	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	17645	161	17554	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCTCCTGAATACATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	101999852	102005447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUSG00000058655.10_102001421_102005608_1	chr15	+	2370	5	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	19213	0	19122	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAATGTTGCAGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	102001420	102005608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUSG00000058665.9_120530398_120535387_1	chr1	+	2039	2	FSM	ENSMUSG00000058665.9	ENSMUST00000079721.9	2624	2	251	334	251	-334	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTTCGTTTTCGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	120530397	120535387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_120531651_120534601
ENSMUSG00000058665.9_120530489_120535466_1	chr1	+	2027	2	FSM	ENSMUSG00000058665.9	ENSMUST00000079721.9	2624	2	342	255	342	-255	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCTCTGGGACTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	120530488	120535466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_120531651_120534601
ENSMUSG00000058665.9_120530744_120535721_1	chr1	+	2027	2	FSM	ENSMUSG00000058665.9	ENSMUST00000079721.9	2624	2	597	0	597	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGACTGCCCTCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	120530743	120535721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_120531651_120534601
ENSMUSG00000058672.8_34259419_34260640_1	chr13	-	313	3	ISM	ENSMUSG00000058672.8	ENSMUST00000056427.10	1610	4	1350	1162	1350	-1162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAAGCTGTGACTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	34260640	34259418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_34259512_34260160_34260272_34260531
ENSMUSG00000058672.8_34259419_34260642_1	chr13	-	310	3	NNC	ENSMUSG00000058672.8	novel	1610	4	NA	NA	1348	-1162	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAAGCTGTGACTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	34260642	34259418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_34259512_34260165_34260272_34260531
ENSMUSG00000058672.8_34259486_34261890_1	chr13	-	281	4	FSM	ENSMUSG00000058672.8	ENSMUST00000056427.10	1610	4	100	1229	100	-1229	multi-exon	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAAGGCCACTACACAGA	NA	NA	NA	NA	NA	NA	NA	NA	34261890	34259485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_34259512_34260160_34260272_34260531_34260641_34261855
ENSMUSG00000058690.15_36612315_36662130_1	chr14	-	1339	9	ISM	ENSMUSG00000058690.15	ENSMUST00000090024.11	7509	11	28604	15422	-4601	-10999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCACCGCAGACAGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	36662130	36612314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36612384_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768
ENSMUSG00000058690.15_36660572_36662960_1	chr14	-	1358	2	ISM	ENSMUSG00000058690.15	ENSMUST00000067700.13	7334	10	27684	63679	-5431	-59256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTATGAGTCCTCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	36662960	36660571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36660738_36661768
ENSMUSG00000058690.15_36662059_36690670_1	chr14	-	1335	2	ISM	ENSMUSG00000058690.15	ENSMUST00000067700.13	7334	10	-26	65166	-26	-60743	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGACCAGACTGGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	36690670	36662058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_36663222_36690498
ENSMUSG00000058704.10_74507697_74602491_1	chr17	-	1487	10	FSM	ENSMUSG00000058704.10	ENST00000404530.6	1466	10	-21	0	-21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	NA	NA	NA	NA	NA	NA	NA	NA	74602491	74507696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686_74601765_74602407
ENSMUSG00000058704.10_74508275_74601785_1	chr17	-	777	8	FSM	ENSMUSG00000058704.10	ENST00000426310.6	1282	8	81	424	0	-424	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATTATGCCCAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	74601785	74508274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74565418_74565501_74601686
ENSMUSG00000058709.12_26858084_26866227_1	chr7	-	2100	6	NNC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTGTATTCCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	26866227	26858083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_26858637_26858948_26859017_26859211_26859349_26859718_26859833_26864044_26865154_26866108
ENSMUSG00000058729.14_180468899_180515940_2	chr1	+	1460	13	NNC	ENSMUSG00000058729.14	novel	1541	13	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1035	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGACGTGTAGGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	180468898	180515940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_180468963_180475865_180475899_180478306_180478402_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501634_180501710_180508664_180508791_180515524_180515705_180515827
ENSMUSG00000058729.14_180468899_180515940_3	chr1	+	1466	13	FSM	ENSMUSG00000058729.14	ENST00000481685.1	1541	13	75	0	75	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGACGTGTAGGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	180468898	180515940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_180468963_180475865_180475899_180478306_180478402_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827
ENSMUSG00000058729.14_180468931_180515940_1	chr1	+	1434	13	FSM	ENSMUSG00000058729.14	ENST00000481685.1	1541	13	107	0	107	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGACGTGTAGGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	180468930	180515940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_180468963_180475865_180475899_180478306_180478402_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827
ENSMUSG00000058740.15_25767893_25791799_1	chr2	+	1748	18	ISM	ENSMUSG00000058740.15	ENST00000490355.6	3707	31	0	14330	0	-14330	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAGAGTATCCTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	25767892	25791799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25768048_25772207_25772250_25778080_25778161_25778770_25778871_25780860_25780918_25781202_25781252_25782069_25782130_25782345_25782421_25782485_25782570_25783140_25783236_25784293_25784475_25788282_25788448_25788710_25788848_25790234_25790299_25790383_25790493_25790900_25791010_25791220_25791371_25791763
ENSMUSG00000058740.15_25767893_25791852_1	chr2	+	1801	18	ISM	ENSMUSG00000058740.15	ENST00000490355.6	3707	31	0	14277	0	-14277	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTGCTTCTATATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	25767892	25791852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25768048_25772207_25772250_25778080_25778161_25778770_25778871_25780860_25780918_25781202_25781252_25782069_25782130_25782345_25782421_25782485_25782570_25783140_25783236_25784293_25784475_25788282_25788448_25788710_25788848_25790234_25790299_25790383_25790493_25790900_25791010_25791220_25791371_25791763
ENSMUSG00000058740.15_25768030_25791903_1	chr2	+	1715	18	ISM	ENSMUSG00000058740.15	ENST00000490355.6	3707	31	137	14226	137	-14226	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAACAGGAGGAGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	25768029	25791903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25768048_25772207_25772250_25778080_25778161_25778770_25778871_25780860_25780918_25781202_25781252_25782069_25782130_25782345_25782421_25782485_25782570_25783140_25783236_25784293_25784475_25788282_25788448_25788710_25788848_25790234_25790299_25790383_25790493_25790900_25791010_25791220_25791371_25791763
ENSMUSG00000058740.15_25778079_25782569_1	chr2	+	507	7	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	-2	23563	-2	-23560	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGAGGCCTGGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	25778078	25782569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25778161_25778770_25778871_25780860_25780918_25781202_25781252_25782069_25782130_25782345_25782421_25782485
ENSMUSG00000058740.15_25778771_25793407_1	chr2	+	1711	16	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	690	12725	690	-12722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCCCAGGGTGGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	25778770	25793407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25778871_25780860_25780918_25781202_25781252_25782069_25782130_25782345_25782421_25782485_25782570_25783140_25783236_25784293_25784475_25788282_25788448_25788710_25788848_25790234_25790299_25790383_25790493_25790900_25791010_25791220_25791371_25791763_25792003_25793370
ENSMUSG00000058740.15_25782487_25796766_1	chr2	+	1765	13	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	4406	9366	4406	-9363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAACTTCATCGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	25782486	25796766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25782570_25783140_25783236_25784293_25784475_25788282_25788448_25788710_25788848_25790234_25790299_25790383_25790493_25790900_25791010_25791220_25791371_25791763_25792003_25793370_25793606_25795284_25795391_25796674
ENSMUSG00000058740.15_25784355_25797555_1	chr2	+	1707	13	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	6274	8577	6274	-8574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGCTGACAACCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	25784354	25797555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25784475_25788282_25788448_25788710_25788848_25790234_25790299_25790383_25790493_25790900_25791010_25791220_25791371_25791763_25792003_25793370_25793606_25795284_25795391_25796674_25796848_25797286_25797359_25797527
ENSMUSG00000058740.15_25784355_25797616_1	chr2	+	1768	13	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	6274	8516	6274	-8513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGCAGATGCCAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	25784354	25797616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25784475_25788282_25788448_25788710_25788848_25790234_25790299_25790383_25790493_25790900_25791010_25791220_25791371_25791763_25792003_25793370_25793606_25795284_25795391_25796674_25796848_25797286_25797359_25797527
ENSMUSG00000058740.15_25784459_25797654_1	chr2	+	1702	13	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	6378	8478	6378	-8475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCCGGTGAGCACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	25784458	25797654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25784475_25788282_25788448_25788710_25788848_25790234_25790299_25790383_25790493_25790900_25791010_25791220_25791371_25791763_25792003_25793370_25793606_25795284_25795391_25796674_25796848_25797286_25797359_25797527
ENSMUSG00000058740.15_25788283_25798168_1	chr2	+	1806	13	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	10202	7964	10202	-7961	internal_fragment	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCAGGCTCCTCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	25788282	25798168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25788448_25788710_25788848_25790234_25790299_25790383_25790493_25790900_25791010_25791220_25791371_25791763_25792003_25793370_25793606_25795284_25795391_25796674_25796848_25797286_25797359_25797527_25797663_25798056
ENSMUSG00000058740.15_25788414_25799271_1	chr2	+	1730	14	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	10333	6861	10333	-6858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTCGAGTATTTAGTATC	NA	NA	NA	NA	NA	NA	NA	NA	25788413	25799271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25788448_25788710_25788848_25790234_25790299_25790383_25790493_25790900_25791010_25791220_25791371_25791763_25792003_25793370_25793606_25795284_25795391_25796674_25796848_25797286_25797359_25797527_25797663_25798056_25798169_25799216
ENSMUSG00000058740.15_25788793_25799654_1	chr2	+	1710	14	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	10712	6478	10712	-6475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATACTACACCAGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	25788792	25799654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25788848_25790234_25790299_25790383_25790493_25790900_25791010_25791220_25791371_25791763_25792003_25793370_25793606_25795284_25795391_25796674_25796848_25797286_25797359_25797527_25797663_25798056_25798169_25799216_25799319_25799605
ENSMUSG00000058740.15_25790460_25801057_1	chr2	+	1710	14	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	12379	5075	12379	-5072	internal_fragment	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGACTGCGAGGATACTC	NA	NA	NA	NA	NA	NA	NA	NA	25790459	25801057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25790493_25790900_25791010_25791220_25791371_25791763_25792003_25793370_25793606_25795284_25795391_25796674_25796848_25797286_25797359_25797527_25797663_25798056_25798169_25799216_25799319_25799605_25799690_25799825_25799949_25801020
ENSMUSG00000058740.15_25791263_25801224_1	chr2	+	1693	12	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	13182	4908	13182	-4905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGCAGGCAGGGAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	25791262	25801224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25791371_25791763_25792003_25793370_25793606_25795284_25795391_25796674_25796848_25797286_25797359_25797527_25797663_25798056_25798169_25799216_25799319_25799605_25799690_25799825_25799949_25801020
ENSMUSG00000058740.15_25791310_25801278_1	chr2	+	1700	12	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	13229	4854	13229	-4851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTGTACCGACGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	25791309	25801278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25791371_25791763_25792003_25793370_25793606_25795284_25795391_25796674_25796848_25797286_25797359_25797527_25797663_25798056_25798169_25799216_25799319_25799605_25799690_25799825_25799949_25801020
ENSMUSG00000058740.15_25791764_25802729_1	chr2	+	1792	12	ISM	ENSMUSG00000058740.15	ENST00000631073.2	3724	31	23879	3403	13683	-3400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTCTGCTCCAGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	25791763	25802729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25792003_25793370_25793606_25795284_25795391_25796674_25796848_25797286_25797359_25797527_25797663_25798056_25798169_25799216_25799319_25799605_25799690_25799825_25799949_25801020_25801369_25802666
ENSMUSG00000058740.15_25791891_25805880_1	chr2	+	1755	13	ISM	ENSMUSG00000058740.15	ENST00000631073.2	3724	31	24006	252	13810	-249	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACCAAGTGCTGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	25791890	25805880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25792003_25793370_25793606_25795284_25795391_25796674_25796848_25797286_25797359_25797527_25797663_25798056_25798169_25799216_25799319_25799605_25799690_25799825_25799949_25801020_25801369_25802666_25802730_25805790
ENSMUSG00000058740.15_25793370_25806132_1	chr2	+	1766	13	ISM	ENSMUSG00000058740.15	ENST00000490355.6	3707	31	25477	-3	15289	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1471	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCTGGGGCGAACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	25793369	25806132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25793606_25795284_25795391_25796674_25796848_25797286_25797359_25797527_25797663_25798056_25798169_25799216_25799319_25799605_25799690_25799825_25799949_25801020_25801369_25802666_25802730_25805790_25805879_25806008
ENSMUSG00000058740.15_25793514_25806132_1	chr2	+	1622	13	ISM	ENSMUSG00000058740.15	ENST00000490355.6	3707	31	25621	-3	15433	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1059	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCTGGGGCGAACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	25793513	25806132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25793606_25795284_25795391_25796674_25796848_25797286_25797359_25797527_25797663_25798056_25798169_25799216_25799319_25799605_25799690_25799825_25799949_25801020_25801369_25802666_25802730_25805790_25805879_25806008
ENSMUSG00000058740.15_25798075_25801133_1	chr2	+	516	5	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	19994	4999	19994	-4996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGTCACGGGGGCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	25798074	25801133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25798169_25799216_25799319_25799605_25799690_25799825_25799949_25801020
ENSMUSG00000058740.15_25801173_25806129_1	chr2	+	468	4	ISM	ENSMUSG00000058740.15	ENST00000490355.6	3707	31	33280	0	23092	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCATGCTGGGGCGAACA	NA	NA	NA	NA	NA	NA	NA	NA	25801172	25806129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25801369_25802666_25802730_25805790_25805879_25806008
ENSMUSG00000058748.10_4663167_4679634_1	chr8	+	1767	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	0	597	0	254	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTCAAGCCATTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	4663166	4679634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
ENSMUSG00000058756.14_98644170_98653869_1	chr11	+	941	6	ISM	ENSMUSG00000058756.14	ENSMUST00000103139.11	2246	9	11471	2068	11471	-2068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGCCCATGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	98644169	98653869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746
ENSMUSG00000058756.14_98644412_98654525_1	chr11	+	894	7	ISM	ENSMUSG00000058756.14	ENSMUST00000103139.11	2246	9	11713	1412	11713	-1412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGAACTGGGCAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	98644411	98654525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354
ENSMUSG00000058756.14_98652671_98659348_1	chr11	+	982	5	ISM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	20034	484	19972	-484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCCCTCGGAGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	98652670	98659348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
ENSMUSG00000058756.14_98654488_98659672_1	chr11	+	944	3	ISM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	21851	160	21789	-160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTCATGCTTCTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98654487	98659672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98654614_98655103_98655232_98658982
ENSMUSG00000058799.17_111309103_111331254_1	chr10	+	1782	12	FSM	ENSMUSG00000058799.17	ENST00000549596.5	1797	12	15	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCTCTGCCTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	111309102	111331254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329318_111330031_111330155_111330655
ENSMUSG00000058799.17_111309103_111332224_1	chr10	+	1491	12	NNC	ENSMUSG00000058799.17	novel	1564	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATACTTGGAGTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	111309102	111332224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_111309213_111317140_111317178_111322504_111322608_111325888_111326031_111326237_111326319_111326872_111326999_111327947_111328020_111328702_111328843_111329157_111329318_111330031_111330177_111331185_111331237_111331900
ENSMUSG00000058799.17_111309103_111332224_2	chr10	+	1499	13	FSM	ENSMUSG00000058799.17	ENST00000542344.5	1564	13	65	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATACTTGGAGTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	111309102	111332224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_111309213_111317140_111317178_111322504_111322608_111325888_111326031_111326237_111326319_111326872_111326999_111327947_111328020_111328702_111328843_111329157_111329318_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ENSMUSG00000058799.17_111309103_111332224_3	chr10	+	1496	13	NIC	ENSMUSG00000058799.17	novel	1564	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	2952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATACTTGGAGTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	111309102	111332224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_111309213_111317140_111317178_111322504_111322608_111325888_111326031_111326237_111326319_111326872_111326999_111327947_111328020_111328702_111328843_111329157_111329315_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ENSMUSG00000058799.17_111309142_111329238_1	chr10	+	972	10	NIC	ENSMUSG00000058799.17	novel	1365	13	NA	NA	0	-1632	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCGTACTGTGACTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	111309141	111329238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326839_111326999_111327947_111328020_111328702_111328843_111329157
ENSMUSG00000058799.17_111316812_111332184_1	chr10	+	1773	14	FSM	ENSMUSG00000058799.17	ENSMUST00000218828.2	3934	14	334	1827	-331	-40	multi-exon	FALSE	canonical	NA	NA	NA	NA	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAGCTATTGGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	111316811	111332184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ENSMUSG00000058799.17_111321360_111331004_1	chr10	+	1159	11	ISM	ENSMUSG00000058799.17	ENST00000535020.6	1444	12	4217	250	10	32	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGTGTTGGGAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	111321359	111331004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329318_111330031_111330155_111330655_111330686_111330911
ENSMUSG00000058799.17_111322565_111330080_1	chr10	+	813	8	ISM	ENSMUSG00000058799.17	ENST00000432820.1	1124	11	1215	1156	1215	-790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACGTGAGCGCATAATC	NA	NA	NA	NA	NA	NA	NA	NA	111322564	111330080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329315_111330031
ENSMUSG00000058799.17_111325887_111330686_1	chr10	+	914	8	ISM	ENSMUSG00000058799.17	ENST00000552342.5	1523	12	16773	286	4537	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTTACCAAATGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	111325886	111330686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_111326031_111326237_111326323_111326839_111326999_111327947_111328020_111328702_111328843_111329157_111329318_111330031_111330155_111330655
ENSMUSG00000058799.17_111325887_111331189_1	chr10	+	880	9	ISM	ENSMUSG00000058799.17	ENST00000432820.1	1124	11	4537	47	4537	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAAGAAGGAGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	111325886	111331189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329315_111330031_111330155_111330655_111330686_111331185
ENSMUSG00000058799.17_111325887_111331189_2	chr10	+	1157	9	ISM	ENSMUSG00000058799.17	ENST00000535020.6	1444	12	8744	65	4537	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAAGAAGGAGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	111325886	111331189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329318_111330031_111330155_111330655_111330686_111330911
ENSMUSG00000058799.17_111326236_111330870_1	chr10	+	956	7	ISM	ENSMUSG00000058799.17	ENST00000552342.5	1523	12	17122	102	4886	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTTTTTTTTATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	111326235	111330870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_111326323_111326839_111326999_111327947_111328020_111328702_111328843_111329157_111329318_111330031_111330155_111330655
ENSMUSG00000058799.17_111326236_111331254_1	chr10	+	803	8	ISM	ENSMUSG00000058799.17	ENST00000432820.1	1124	11	4886	-18	4886	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCTCTGCCTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	111326235	111331254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329315_111330031_111330155_111330655_111330686_111331185
ENSMUSG00000058806.16_61674119_61814401_1	chr10	-	2057	27	NNC	ENSMUSG00000058806.16	novel	2066	29	NA	NA	14	16	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGAGGTCGGTGGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	61814401	61674118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_61674488_61675856_61675896_61678382_61678461_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61698406_61698551_61698822_61698868_61699719_61699802_61703226_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61725857_61725924_61741028_61741060_61747485_61747513_61797067_61797138_61814127
ENSMUSG00000058806.16_61674119_61814401_2	chr10	-	2063	26	NNC	ENSMUSG00000058806.16	novel	2066	28	NA	NA	14	16	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGAGGTCGGTGGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	61814401	61674118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_61674488_61675856_61675896_61678382_61678461_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61725857_61725924_61797004_61797138_61814127
ENSMUSG00000058806.16_61674119_61814401_3	chr10	-	2043	26	NNC	ENSMUSG00000058806.16	novel	2066	28	NA	NA	14	16	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGAGGTCGGTGGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	61814401	61674118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_61674488_61675856_61675896_61678382_61678461_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61725857_61725924_61797024_61797138_61814127
ENSMUSG00000058806.16_61674119_61814401_4	chr10	-	2058	28	NNC	ENSMUSG00000058806.16	novel	2066	29	NA	NA	14	16	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1730	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGAGGTCGGTGGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	61814401	61674118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_61674488_61675856_61675896_61678382_61678461_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61725857_61725924_61741028_61741060_61747485_61747513_61797067_61797138_61814127
ENSMUSG00000058806.16_61674181_61698505_1	chr10	-	811	10	ISM	ENSMUSG00000058806.16	ENST00000673641.2	2102	30	115910	46	115910	-46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCCACCAGCACAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	61698505	61674180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61674488_61675856_61675896_61678382_61678461_61684954_61684991_61685935_61685990_61686890_61686945_61689135_61689172_61692116_61692198_61692560_61692588_61698406
ENSMUSG00000058806.16_61674358_61814617_1	chr10	-	2032	27	NNC	ENSMUSG00000058806.16	novel	2066	28	NA	NA	44	5	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCAGATTTTGTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	61814617	61674357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_61674488_61675856_61675896_61678382_61678461_61684954_61684991_61685935_61685990_61686890_61686945_61689135_61689172_61692116_61692198_61692560_61692588_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61725857_61725924_61797048_61797138_61814127
ENSMUSG00000058806.16_61674358_61814649_1	chr10	-	2045	27	NIC	ENSMUSG00000058806.16	novel	2066	28	NA	NA	12	5	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	763	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCAGATTTTGTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	61814649	61674357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_-_61674488_61675856_61675896_61678382_61678461_61684954_61684991_61685935_61685990_61686890_61686945_61689135_61689172_61692116_61692198_61692560_61692588_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61725857_61725924_61797067_61797138_61814127
ENSMUSG00000058806.16_61675857_61725924_1	chr10	-	1384	25	ISM	ENSMUSG00000058806.16	ENST00000522165.5	1818	30	88491	0	88491	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATTCCCAGAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	61725924	61675856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61675896_61679346_61679434_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61693366_61693409_61696218_61696264_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61725857
ENSMUSG00000058806.16_61679388_61698481_1	chr10	-	373	7	ISM	ENSMUSG00000058806.16	ENST00000673842.1	2189	28	116180	5093	115934	-3531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACCAAGGAGCACCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	61698481	61679387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61679434_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61698406
ENSMUSG00000058806.16_61686890_61699783_1	chr10	-	416	6	ISM	ENSMUSG00000058806.16	ENST00000673628.2	2066	29	114632	12755	114632	-11033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTTTGTGACTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	61699783	61686889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61686945_61692116_61692198_61692560_61692588_61698406_61698551_61698822_61698868_61699719
ENSMUSG00000058806.16_61702178_61709771_1	chr10	-	370	7	ISM	ENSMUSG00000058806.16	ENST00000673842.1	2189	28	104890	27883	104644	-26321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATGGTGAGTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	61709771	61702177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709717
ENSMUSG00000058806.16_61705328_61720492_1	chr10	-	359	7	ISM	ENSMUSG00000058806.16	ENST00000673842.1	2189	28	94169	31033	93923	-29471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCCAGGACAGCAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	61720492	61705327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61705357_61705939_61706027_61707068_61707114_61709717_61709800_61710516_61710550_61712046_61712092_61720454
ENSMUSG00000058806.16_61709739_61725923_1	chr10	-	376	7	ISM	ENSMUSG00000058806.16	ENST00000522165.5	1818	30	88492	33882	88492	-33882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAATGAGATTGGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	61725923	61709738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61725857
ENSMUSG00000058806.16_61721466_61814192_1	chr10	-	368	6	NNC	ENSMUSG00000058806.16	novel	2189	28	NA	NA	223	-45609	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGCTTGCCTGAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	61814192	61721465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_61721494_61723027_61723136_61725857_61725924_61747481_61747513_61797067_61797138_61814127
ENSMUSG00000058806.16_61723117_61814315_1	chr10	-	374	5	NNC	ENSMUSG00000058806.16	novel	2189	28	NA	NA	100	-47260	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCAAGGCCCTCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	61814315	61723116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_61723136_61725857_61725924_61747481_61747513_61797067_61797138_61814127
ENSMUSG00000058818.14_3719101_3719659_1	chr7	-	302	2	ISM	ENSMUSG00000058818.14	ENSMUST00000078451.7	3824	15	3722	4693	3722	-4693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTCAAGACTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	3719659	3719100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3719336_3719592
ENSMUSG00000058833.12_70957048_70957711_1	chr8	-	190	2	ISM	ENSMUSG00000058833.12	ENSMUST00000075175.12	671	5	1691	103	1676	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGGCGTCGAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	70957711	70957047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70957160_70957633
ENSMUSG00000058833.12_70957633_70958554_1	chr8	-	227	2	ISM	ENSMUSG00000058833.12	ENSMUST00000136913.2	671	5	833	684	833	-684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCCTGTTGGCCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	70958554	70957632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70957711_70958405
ENSMUSG00000058833.12_70958501_70959387_1	chr8	-	269	3	ISM	ENSMUSG00000058833.12	ENSMUST00000136913.2	671	5	0	1552	0	-1552	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGAAGCAGAGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	70959387	70958500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70958611_70959146_70959230_70959311
ENSMUSG00000058914.13_10952546_10979010_1	chr15	+	984	6	FSM	ENSMUSG00000058914.13	ENSMUST00000022853.15	2338	6	128	1226	103	-782	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAATGTTGGATGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	10952545	10979010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_10952624_10958042_10958155_10960713_10960869_10972066_10972197_10975676_10975777_10978601
ENSMUSG00000058952.13_129652023_129668981_1	chr3	+	1268	7	NNC	ENSMUSG00000058952.13	novel	1271	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTTTGTGTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	129652022	129668981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_129652118_129652361_129652504_129661821_129661960_129662129_129662234_129666495_129666768_129667934_129668040_129668569
ENSMUSG00000058952.13_129652023_129668981_2	chr3	+	1273	7	NNC	ENSMUSG00000058952.13	novel	1271	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTTTGTGTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	129652022	129668981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_129652118_129652361_129652504_129661822_129661960_129662129_129662234_129666489_129666768_129667934_129668040_129668569
ENSMUSG00000058952.13_129652023_129668981_3	chr3	+	1266	7	NNC	ENSMUSG00000058952.13	novel	1271	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTTTGTGTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	129652022	129668981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_129652118_129652361_129652504_129661821_129661960_129662129_129662234_129666489_129666768_129667934_129668032_129668569
ENSMUSG00000058952.13_129652023_129668981_4	chr3	+	1273	7	NNC	ENSMUSG00000058952.13	novel	1271	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTTTGTGTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	129652022	129668981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_129652118_129652361_129652504_129661821_129661960_129662129_129662234_129666489_129666768_129667934_129668040_129668570
ENSMUSG00000058952.13_129652023_129668981_5	chr3	+	1274	7	FSM	ENSMUSG00000058952.13	ENST00000394635.8	1271	7	0	-3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTTTGTGTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	129652022	129668981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_129652118_129652361_129652504_129661821_129661960_129662129_129662234_129666489_129666768_129667934_129668040_129668569
ENSMUSG00000058952.13_129652023_129668981_6	chr3	+	1270	7	NNC	ENSMUSG00000058952.13	novel	1271	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTTTGTGTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	129652022	129668981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_129652118_129652361_129652504_129661821_129661960_129662133_129662234_129666489_129666768_129667934_129668040_129668569
ENSMUSG00000058952.13_129652023_129668981_7	chr3	+	1269	7	NNC	ENSMUSG00000058952.13	novel	1271	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTTTGTGTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	129652022	129668981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_129652118_129652361_129652504_129661821_129661960_129662129_129662229_129666489_129666768_129667934_129668040_129668569
ENSMUSG00000058952.13_129652023_129668981_8	chr3	+	1273	7	NNC	ENSMUSG00000058952.13	novel	1271	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTTTGTGTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	129652022	129668981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_129652118_129652361_129652504_129661821_129661960_129662129_129662234_129666489_129666768_129667935_129668040_129668569
ENSMUSG00000058952.13_129652063_129666637_1	chr3	+	556	5	ISM	ENSMUSG00000058952.13	ENST00000512148.5	1122	7	40	2223	40	-2223	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAAAATGCACACGGG	NA	NA	NA	NA	NA	NA	NA	NA	129652062	129666637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_129652118_129652361_129652473_129661821_129661960_129662129_129662234_129666489
ENSMUSG00000058975.8_46047429_46077629_1	chr7	+	1103	2	FSM	ENSMUSG00000058975.8	ENSMUST00000025202.8	7760	2	1508	5149	357	-5149	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCCACACCACAGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	46047428	46077629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_46047672_46076769
ENSMUSG00000058975.8_46047640_46084725_1	chr7	+	1110	3	ISM	ENSMUSG00000058975.8	ENSMUST00000160433.3	3156	4	568	3403	568	1947	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCGGGGAGTACGCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	46047639	46084725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_46047672_46076769_46077704_46084581
ENSMUSG00000058975.8_46076928_46105605_1	chr7	+	1110	3	ISM	ENSMUSG00000058975.8	ENST00000639325.2	3491	5	31000	45131	29856	17477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGGAGAAACAGAAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	46076927	46105605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_46077704_46084581_46084833_46105522
ENSMUSG00000058975.8_46077087_46105755_1	chr7	+	1101	3	ISM	ENSMUSG00000058975.8	ENST00000639325.2	3491	5	31159	44981	30015	17627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTAAGAGGAGAGCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	46077086	46105755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_46077704_46084581_46084833_46105522
ENSMUSG00000058975.8_46077170_46105782_1	chr7	+	1045	3	ISM	ENSMUSG00000058975.8	ENST00000639325.2	3491	5	31242	44954	30098	17654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCTTCAGAGGTAAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	46077169	46105782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_46077704_46084581_46084833_46105522
ENSMUSG00000059003.13_9396755_9430532_1	chr16	-	835	2	ISM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	149317	1836	149317	-1064	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCCCAGGGATAAGATC	NA	NA	NA	NA	NA	NA	NA	NA	9430532	9396754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_9397491_9430433
ENSMUSG00000059003.13_9396910_9462025_1	chr16	-	832	3	ISM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	117824	1991	117824	-1219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATTTCTGAAACCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	9462025	9396909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_9397491_9430433_9430622_9461962
ENSMUSG00000059003.13_9397063_9471314_1	chr16	-	832	4	ISM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	108535	2144	108535	-1372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGACCCCGGCAGCTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	9471314	9397062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_9397491_9430433_9430622_9461962_9462124_9471259
ENSMUSG00000059003.13_9397127_9471364_1	chr16	-	818	4	ISM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	108485	2208	108485	-1436	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCAATGAGTCCAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	9471364	9397126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_9397491_9430433_9430622_9461962_9462124_9471259
ENSMUSG00000059003.13_9397420_9481132_1	chr16	-	864	6	ISM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	98717	2501	98717	-1729	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCACAGAGCAACATGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	9481132	9397419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_9397491_9430433_9430622_9461962_9462124_9471259_9471490_9475537_9475664_9481044
ENSMUSG00000059003.13_9430488_9481327_1	chr16	-	830	6	ISM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	98522	35569	98522	-34797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACCCTGGAAGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	9481327	9430487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_9430622_9461962_9462124_9471259_9471490_9475537_9475664_9481044_9481199_9481302
ENSMUSG00000059003.13_9430549_9481387_1	chr16	-	829	6	ISM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	98462	35630	98462	-34858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCATTGGGAGCGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	9481387	9430548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_9430622_9461962_9462124_9471259_9471490_9475537_9475664_9481044_9481199_9481302
ENSMUSG00000059003.13_9430597_9481471_1	chr16	-	865	6	ISM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	98378	35678	98378	-34906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTGTCTTGAACTACAA	NA	NA	NA	NA	NA	NA	NA	NA	9481471	9430596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_9430622_9461962_9462124_9471259_9471490_9475537_9475664_9481044_9481199_9481302
ENSMUSG00000059003.13_9462062_9487688_1	chr16	-	861	6	ISM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	92161	67143	92161	-66371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGGAATATTCGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	9487688	9462061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_9462124_9471259_9471490_9475537_9475664_9481044_9481199_9481302_9481472_9487568
ENSMUSG00000059003.13_9471411_9525572_1	chr16	-	839	6	ISM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	54277	76492	54277	-75720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAATCCTAAAGGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	9525572	9471410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_9471490_9475537_9475664_9481044_9481199_9481302_9481472_9487568_9487775_9525467
ENSMUSG00000059003.13_9475543_9579379_1	chr16	-	890	6	ISM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	470	80624	470	-79852	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGTAAGGAAGCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	9579379	9475542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_9475664_9481044_9481199_9481302_9481472_9487568_9487775_9525467_9525583_9579254
ENSMUSG00000059003.13_9481083_9579480_1	chr16	-	832	5	ISM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	369	86164	369	-85392	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGTAATGGCACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	9579480	9481082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_9481199_9481302_9481472_9487568_9487775_9525467_9525583_9579254
ENSMUSG00000059003.13_9481136_9579532_1	chr16	-	831	5	ISM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	317	86217	317	-85445	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGACTTCTCCGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	9579532	9481135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_9481199_9481302_9481472_9487568_9487775_9525467_9525583_9579254
ENSMUSG00000059003.13_9481377_9579707_1	chr16	-	869	4	ISM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	142	86458	142	-85686	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTCTACCTGGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	9579707	9481376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_9481472_9487568_9487775_9525467_9525583_9579254
ENSMUSG00000059003.13_9481444_9579745_1	chr16	-	840	4	ISM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	104	86525	104	-85753	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTGCTGCAAGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	9579745	9481443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_9481472_9487568_9487775_9525467_9525583_9579254
ENSMUSG00000059005.14_75489662_75496465_1	chr2	+	1735	10	FSM	ENSMUSG00000059005.14	ENST00000676681.1	3816	10	76	2005	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	75489661	75496465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75490134_75496465_1	chr2	+	1948	11	NNC	ENSMUSG00000059005.14	novel	1920	11	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	75490133	75496465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_75490278_75491809_75491930_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75490134_75496465_2	chr2	+	1945	11	NNC	ENSMUSG00000059005.14	novel	1920	11	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	75490133	75496465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_75490278_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494053_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75490134_75496465_3	chr2	+	1951	11	FSM	ENSMUSG00000059005.14	ENST00000679328.1	1920	11	13	-44	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	75490133	75496465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_75490278_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75490134_75496465_4	chr2	+	1949	11	NNC	ENSMUSG00000059005.14	novel	1920	11	NA	NA	13	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	1455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	75490133	75496465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_75490278_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493916_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75490134_75496465_5	chr2	+	1947	11	NNC	ENSMUSG00000059005.14	novel	1920	11	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	75490133	75496465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_75490278_75491809_75491937_75492022_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75490134_75496465_6	chr2	+	1950	11	NNC	ENSMUSG00000059005.14	novel	1920	11	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	75490133	75496465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_75490278_75491809_75491933_75492014_75492162_75492239_75492451_75492831_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75490134_75496465_7	chr2	+	1942	11	NNC	ENSMUSG00000059005.14	novel	1920	11	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	75490133	75496465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_75490278_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493013_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75490134_75496465_8	chr2	+	1944	11	NNC	ENSMUSG00000059005.14	novel	1920	11	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	75490133	75496465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_75490278_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495748
ENSMUSG00000059005.14_75490134_75496465_9	chr2	+	1945	11	NNC	ENSMUSG00000059005.14	novel	1920	11	NA	NA	13	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	75490133	75496465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_75490278_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493264_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75491846_75496339_1	chr2	+	1555	9	ISM	ENSMUSG00000059005.14	ENST00000677863.1	3870	10	2260	2131	1725	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATAGATATTTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	75491845	75496339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493092_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75492022_75496465_1	chr2	+	1587	8	ISM	ENSMUSG00000059005.14	ENST00000677863.1	3870	10	2436	2005	1901	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	75492021	75496465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75492162_75492239_75492451_75492830_75492921_75493004_75493092_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75492064_75496499_1	chr2	+	1579	8	ISM	ENSMUSG00000059005.14	ENST00000677863.1	3870	10	2478	1971	1943	34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCATGATTTTAGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	75492063	75496499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75492162_75492239_75492451_75492830_75492921_75493004_75493092_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75492075_75496624_1	chr2	+	1639	8	ISM	ENSMUSG00000059005.14	ENST00000676681.1	3816	10	2489	1846	1954	159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTACTCACCAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	75492074	75496624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75492128_75496536_1	chr2	+	1552	8	ISM	ENSMUSG00000059005.14	ENST00000677863.1	3870	10	2542	1934	2007	71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATGTTAAGAACATCTC	NA	NA	NA	NA	NA	NA	NA	NA	75492127	75496536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75492162_75492239_75492451_75492830_75492921_75493004_75493092_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75492342_75496831_1	chr2	+	1657	7	ISM	ENSMUSG00000059005.14	ENST00000676681.1	3816	10	2756	1639	2221	366	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTCATTGAAACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	75492341	75496831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75492348_75496677_1	chr2	+	1551	7	ISM	ENSMUSG00000059005.14	ENST00000677863.1	3870	10	2762	1793	2227	212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCCATACAGACCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	75492347	75496677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75492451_75492830_75492921_75493004_75493092_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75492405_75496733_1	chr2	+	1550	7	ISM	ENSMUSG00000059005.14	ENST00000677863.1	3870	10	2819	1737	2284	268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTTTGCTTATAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	75492404	75496733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75492451_75492830_75492921_75493004_75493092_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75492833_75496965_1	chr2	+	1680	6	ISM	ENSMUSG00000059005.14	ENST00000676681.1	3816	10	3247	1505	2712	500	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCACCTCACAGCCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	75492832	75496965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75492921_75493004_75493101_75493188_75493270_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75493974_75497036_1	chr2	+	1571	4	ISM	ENSMUSG00000059005.14	ENST00000679328.1	1920	11	3853	-615	3853	571	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTTTGTGTATATATA	NA	NA	NA	NA	NA	NA	NA	NA	75493973	75497036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75494028_75497095_1	chr2	+	1576	4	ISM	ENSMUSG00000059005.14	ENST00000679328.1	1920	11	3907	-674	3907	630	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGAGACCCTGTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	75494027	75497095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75495456_75497280_1	chr2	+	1646	3	ISM	ENSMUSG00000059005.14	ENST00000679328.1	1920	11	5335	-859	5335	815	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATAAAAGGGGGAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	75495455	75497280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_75495495_75495577_75495646_75495741
ENSMUSG00000059040.6_48178402_48181285_1	chr18	+	1597	2	FSM	ENSMUSG00000059040.6	ENSMUST00000076155.6	1791	2	0	194	0	-175	multi-exon	FALSE	canonical	NA	NA	NA	NA	15019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAATCATGTGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	48178401	48181285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_48178513_48179799
ENSMUSG00000059070.17_45364881_45366531_1	chr7	+	1346	2	ISM	ENSMUSG00000059070.17	ENSMUST00000210640.2	2989	7	0	3729	0	-3716	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTTGACTTAAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	45364880	45366531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45365267_45365571
ENSMUSG00000059070.17_45364996_45366561_1	chr7	+	1261	2	ISM	ENSMUSG00000059070.17	ENSMUST00000210640.2	2989	7	115	3699	115	-3686	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGGGGACAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	45364995	45366561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45365267_45365571
ENSMUSG00000059070.17_45365087_45366658_1	chr7	+	1267	2	ISM	ENSMUSG00000059070.17	ENSMUST00000210640.2	2989	7	206	3602	206	-3589	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCACCATTTTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	45365086	45366658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45365267_45365571
ENSMUSG00000059070.17_45366341_45368736_1	chr7	+	1283	2	ISM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	-1154	1523	-1154	-1511	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCTACCTGCGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	45366340	45368736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45367564_45368676
ENSMUSG00000059070.17_45366490_45369362_1	chr7	+	1288	4	ISM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	-1005	897	-1005	-885	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCCGCGAGAACAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	45366489	45369362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343
ENSMUSG00000059070.17_45366556_45369407_1	chr7	+	1267	4	ISM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	-939	852	-939	-840	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGTGCGGATTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	45366555	45369407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343
ENSMUSG00000059070.17_45366676_45369845_1	chr7	+	1310	5	ISM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	-819	414	-819	-402	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAAGGGCCGAGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	45366675	45369845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717
ENSMUSG00000059070.17_45367873_45369011_1	chr7	+	278	3	ISM	ENSMUSG00000059070.17	ENSMUST00000209287.2	1027	6	292	1241	292	-1236	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTCATGAGCCGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	45367872	45369011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45368005_45368676_45368764_45368952
ENSMUSG00000059119.10_143067316_143088082_1	chr7	-	975	9	ISM	ENSMUSG00000059119.10	ENST00000620138.4	1577	15	14815	-8	14483	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTTTTTTTGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	143088082	143067315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143067358_143068088_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143080880_143081049_143083154_143083295_143086045_143086118_143088022
ENSMUSG00000059119.10_143067316_143102841_1	chr7	-	1565	16	FSM	ENSMUSG00000059119.10	ENST00000380542.9	1565	16	8	-8	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTTTTTTTGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	143102841	143067315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_143067358_143068088_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143080880_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ENSMUSG00000059119.10_143067316_143102841_2	chr7	-	1555	15	NNC	ENSMUSG00000059119.10	novel	1565	16	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTTTTTTTGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	143102841	143067315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_143067358_143068088_143068375_143072586_143072623_143074120_143074178_143077877_143078018_143080880_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ENSMUSG00000059119.10_143067906_143077978_1	chr7	-	673	5	ISM	ENSMUSG00000059119.10	ENSMUST00000072727.7	2285	16	24851	590	24587	-581	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGTTTTGGTTTTAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	143077978	143067905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897
ENSMUSG00000059119.10_143067956_143075167_1	chr7	-	506	3	ISM	ENSMUSG00000059119.10	ENSMUST00000209098.2	2281	15	27398	631	27398	-631	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCCAAGCACTGTAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	143075167	143067955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143068375_143074120_143074178_143075137
ENSMUSG00000059119.10_143068089_143078453_1	chr7	-	516	5	ISM	ENSMUSG00000059119.10	ENSMUST00000209098.2	2281	15	24112	764	24112	-764	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGGTTGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	143078453	143068088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430
ENSMUSG00000059119.10_143068089_143088154_1	chr7	-	995	7	NNC	ENSMUSG00000059119.10	novel	1577	15	NA	NA	14411	-764	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGGTTGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	143088154	143068088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_143068375_143074120_143074178_143077877_143078018_143080880_143081049_143083154_143083295_143086045_143086118_143088022
ENSMUSG00000059119.10_143068301_143083294_1	chr7	-	590	7	ISM	ENSMUSG00000059119.10	ENSMUST00000209098.2	2281	15	19271	976	19271	-976	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCAGGACCGCAGGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	143083294	143068300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154
ENSMUSG00000059119.10_143068301_143089776_2	chr7	-	1022	10	ISM	ENSMUSG00000059119.10	ENST00000620138.4	1577	15	13121	977	12789	-976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCAGGACCGCAGGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	143089776	143068300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143080880_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634
ENSMUSG00000059119.10_143075164_143086117_1	chr7	-	505	6	ISM	ENSMUSG00000059119.10	ENSMUST00000209098.2	2281	15	16448	7839	16448	-7839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGGCGAGGAAGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	143086117	143075163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045
ENSMUSG00000059119.10_143077920_143088076_1	chr7	-	533	6	ISM	ENSMUSG00000059119.10	ENSMUST00000209098.2	2281	15	14489	10595	14489	-10595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCATAGAGGATGATGACA	NA	NA	NA	NA	NA	NA	NA	NA	143088076	143077919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022
ENSMUSG00000059119.10_143077920_143089474_1	chr7	-	698	7	ISM	ENSMUSG00000059119.10	ENSMUST00000209098.2	2281	15	13091	10595	13091	-10595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCATAGAGGATGATGACA	NA	NA	NA	NA	NA	NA	NA	NA	143089474	143077919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387
ENSMUSG00000059119.10_143080903_143089474_1	chr7	-	577	5	ISM	ENSMUSG00000059119.10	ENSMUST00000209098.2	2281	15	13091	13578	13091	-13578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCAGGGGCAGCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	143089474	143080902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387
ENSMUSG00000059119.10_143083153_143089776_1	chr7	-	575	5	ISM	ENSMUSG00000059119.10	ENSMUST00000209098.2	2281	15	12789	15828	12789	-15828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACATGTCCTTCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	143089776	143083152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634
ENSMUSG00000059146.13_77842128_77897003_1	chr7	-	667	4	ISM	ENSMUSG00000059146.13	ENSMUST00000193002.6	2678	18	330534	-27	330528	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACCAAACAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	77897003	77842127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_77842493_77848540_77848700_77853850_77853893_77896902
ENSMUSG00000059146.13_77842128_78005899_1	chr7	-	1197	6	ISM	ENSMUSG00000059146.13	ENST00000355254.6	2938	18	222196	10	221632	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACCAAACAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	78005899	77842127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_77842493_77848540_77848700_77896902_77897147_77900448_77900622_77910031_77910163_78005774
ENSMUSG00000059146.13_77842155_77897038_1	chr7	-	675	4	ISM	ENSMUSG00000059146.13	ENSMUST00000193002.6	2678	18	330499	0	330493	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAACAAAACAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	77897038	77842154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_77842493_77848540_77848700_77853850_77853893_77896902
ENSMUSG00000059146.13_77842155_77897109_1	chr7	-	746	4	ISM	ENSMUSG00000059146.13	ENSMUST00000193002.6	2678	18	330428	0	330422	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAACAAAACAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	77897109	77842154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_77842493_77848540_77848700_77853850_77853893_77896902
ENSMUSG00000059146.13_77842318_77900495_1	chr7	-	667	5	ISM	ENSMUSG00000059146.13	ENSMUST00000193002.6	2678	18	327042	163	327036	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGCTAGTGGTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	77900495	77842317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_77842493_77848540_77848700_77853850_77853893_77896902_77897147_77900448
ENSMUSG00000059146.13_77842377_78110053_1	chr7	-	1205	9	ISM	ENSMUSG00000059146.13	ENST00000355254.6	2938	18	118042	259	117478	-222	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGAGATCTACAAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	78110053	77842376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_77842493_77848540_77848700_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78110028
ENSMUSG00000059146.13_77842403_77900598_1	chr7	-	685	5	ISM	ENSMUSG00000059146.13	ENSMUST00000193002.6	2678	18	326939	248	326933	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAACCACAGCAGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	77900598	77842402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_77842493_77848540_77848700_77853850_77853893_77896902_77897147_77900448
ENSMUSG00000059146.13_77842444_78110108_1	chr7	-	1193	9	ISM	ENSMUSG00000059146.13	ENST00000355254.6	2938	18	117987	326	117423	-289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCTAAAGAAGTGTATGAT	NA	NA	NA	NA	NA	NA	NA	NA	78110108	77842443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_77842493_77848540_77848700_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78110028
ENSMUSG00000059146.13_77848539_77910162_1	chr7	-	751	5	ISM	ENSMUSG00000059146.13	ENSMUST00000193002.6	2678	18	317375	6384	317369	-6384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGGGACAGGTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	77910162	77848538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_77848700_77853850_77853893_77896902_77897147_77900448_77900622_77910031
ENSMUSG00000059146.13_77848597_78110221_1	chr7	-	1201	8	ISM	ENSMUSG00000059146.13	ENST00000355254.6	2938	18	117874	6479	117310	-6442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAGATCTTTACCTAT	NA	NA	NA	NA	NA	NA	NA	NA	78110221	77848596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_77848700_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78110028
ENSMUSG00000059146.13_77848661_78005881_1	chr7	-	736	6	ISM	ENSMUSG00000059146.13	ENSMUST00000193002.6	2678	18	221656	6506	221650	-6506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAAAGCATAATGTACCG	NA	NA	NA	NA	NA	NA	NA	NA	78005881	77848660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_77848700_77853850_77853893_77896902_77897147_77900448_77900622_77910031_77910163_78005774
ENSMUSG00000059146.13_77848662_78110280_1	chr7	-	1195	8	ISM	ENSMUSG00000059146.13	ENST00000355254.6	2938	18	117815	6544	117251	-6507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTGAAAGCATAATGTACC	NA	NA	NA	NA	NA	NA	NA	NA	78110280	77848661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_77848700_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78110028
ENSMUSG00000059146.13_77896982_78110859_1	chr7	-	1190	8	ISM	ENSMUSG00000059146.13	ENST00000355254.6	2938	18	117236	54864	116672	53456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTTGGAGCCAATCTAC	NA	NA	NA	NA	NA	NA	NA	NA	78110859	77896981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78110028_78110326_78110792
ENSMUSG00000059146.13_77900552_78112588_1	chr7	-	1196	9	ISM	ENSMUSG00000059146.13	ENST00000355254.6	2938	18	115507	58434	114943	49886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATGAGCATATTGTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	78112588	77900551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78110028_78110326_78110792_78110935_78111333_78111477_78112532
ENSMUSG00000059146.13_77900608_78112649_1	chr7	-	1201	9	ISM	ENSMUSG00000059146.13	ENST00000355254.6	2938	18	115446	58490	114882	49830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTGGCTGCCAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	78112649	77900607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78110028_78110326_78110792_78110935_78111333_78111477_78112532
ENSMUSG00000059146.13_78005843_78110906_1	chr7	-	700	5	ISM	ENSMUSG00000059146.13	ENST00000355254.6	2938	18	117189	163725	116625	-55405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCATCCCAGTCATTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	78110906	78005842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78005964_78100634_78100738_78101638_78101704_78110028_78110326_78110792
ENSMUSG00000059146.13_78005843_78167241_1	chr7	-	1245	10	ISM	ENSMUSG00000059146.13	ENST00000355254.6	2938	18	60854	163725	60290	-55405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCATCCCAGTCATTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	78167241	78005842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78005964_78100634_78100738_78101638_78101704_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166
ENSMUSG00000059146.13_78100662_78227374_1	chr7	-	1188	10	ISM	ENSMUSG00000059146.13	ENST00000355254.6	2938	18	721	258544	157	-150224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGCCGGTCCAAATTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	78227374	78100661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78100738_78101638_78101704_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283
ENSMUSG00000059146.13_78110029_78227723_1	chr7	-	1279	9	ISM	ENSMUSG00000059146.13	ENST00000355254.6	2938	18	372	267911	7	-159591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCTTGTGCACATCTC	NA	NA	NA	NA	NA	NA	NA	NA	78227723	78110028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283_78227547_78227663
ENSMUSG00000059146.13_78112575_78227726_1	chr7	-	658	6	ISM	ENSMUSG00000059146.13	ENST00000355254.6	2938	18	369	270457	4	-162137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCAACTCCCCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	78227726	78112574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283_78227547_78227663
ENSMUSG00000059146.13_78112629_78227798_1	chr7	-	676	6	ISM	ENSMUSG00000059146.13	ENST00000355254.6	2938	18	297	270511	-68	-162191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGGGAGGCGCGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	78227798	78112628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283_78227547_78227663
ENSMUSG00000059146.13_78166498_78228037_1	chr7	-	611	5	ISM	ENSMUSG00000059146.13	ENST00000355254.6	2938	18	58	324380	58	-216060	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCCCACTTGCGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	78228037	78166497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_78166549_78167166_78167242_78227283_78227547_78227663_78227855_78228006
ENSMUSG00000059173.20_79669311_79736384_1	chr2	-	1252	12	ISM	ENSMUSG00000059173.20	ENST00000409365.5	2018	14	132861	76	2359	-76	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAATACTGAAGAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	79736384	79669310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_79669346_79695381_79695570_79695965_79696087_79698573_79698656_79705346_79705468_79705572_79705675_79708466_79708593_79718184_79718286_79727408_79727550_79728409_79728527_79732155_79732223_79736333
ENSMUSG00000059173.20_79695380_79736480_1	chr2	-	1315	11	ISM	ENSMUSG00000059173.20	ENSMUST00000090756.11	1661	14	2263	6011	2263	-6011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGTTGATGATGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	79736480	79695379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_79695570_79695965_79696087_79698573_79698656_79705346_79705468_79705572_79705675_79708466_79708593_79718184_79718286_79727408_79727550_79728409_79728527_79732155_79732223_79736333
ENSMUSG00000059173.20_79695507_79758135_1	chr2	-	1341	12	ISM	ENSMUSG00000059173.20	ENST00000409365.5	2018	14	111110	26272	-19358	-6138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGTGATGGGAGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	79758135	79695506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_79695570_79695965_79696087_79698573_79698656_79705346_79705468_79705572_79705675_79708466_79708593_79718184_79718286_79727408_79727550_79728409_79728527_79732155_79732223_79736333_79736517_79758018
ENSMUSG00000059173.20_79696031_79868861_1	chr2	-	1270	12	ISM	ENSMUSG00000059173.20	ENST00000409365.5	2018	14	384	26796	384	-6662	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTCATTCCTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	79868861	79696030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_79696087_79698573_79698656_79705346_79705468_79705572_79705675_79708466_79708593_79718184_79718286_79727408_79727550_79728409_79728527_79732155_79732223_79736333_79736517_79758018_79758133_79868801
ENSMUSG00000059173.20_79705407_79869114_1	chr2	-	1325	10	ISM	ENSMUSG00000059173.20	ENST00000409365.5	2018	14	131	36172	131	-16038	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGGAAGTTGCACTA	NA	NA	NA	NA	NA	NA	NA	NA	79869114	79705406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_79705468_79705572_79705675_79708466_79708593_79718184_79718286_79727408_79727550_79728409_79728527_79732155_79732223_79736333_79736517_79758018_79758133_79868801
ENSMUSG00000059182.9_51835616_51851482_1	chr6	-	1064	3	ISM	ENSMUSG00000059182.9	ENSMUST00000078214.8	1583	13	138013	-530	138013	530	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGATGCATGGGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	51851482	51835615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51836551_51836978_51837080_51851454
ENSMUSG00000059182.9_51835873_51884940_1	chr6	-	1044	5	ISM	ENSMUSG00000059182.9	ENSMUST00000078214.8	1583	13	104555	-273	104555	273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAAGAAAGCCCATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	51884940	51835872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866
ENSMUSG00000059182.9_51836084_51886404_1	chr6	-	1083	7	ISM	ENSMUSG00000059182.9	ENSMUST00000078214.8	1583	13	103091	-62	103091	62	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATAGACTCACGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	51886404	51836083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279
ENSMUSG00000059182.9_51836470_51980687_1	chr6	-	1051	12	ISM	ENSMUSG00000059182.9	ENSMUST00000078214.8	1583	13	8808	324	8808	-324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTGCCTCAGCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	51980687	51836469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629
ENSMUSG00000059182.9_51851452_51989495_1	chr6	-	1101	11	ISM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	34	17050	0	-15306	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTTACCCCCCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	51989495	51851451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ENSMUSG00000059208.16_33865207_33884619_1	chr17	-	1826	10	ISM	ENSMUSG00000059208.16	ENSMUST00000087582.13	2370	17	19774	-6	19743	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCCTTTTTTGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	33884619	33865206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465
ENSMUSG00000059208.16_33865434_33888052_1	chr17	-	1885	12	ISM	ENSMUSG00000059208.16	ENSMUST00000148178.8	3934	16	17782	227	16310	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGTATTTTTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	33888052	33865433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958
ENSMUSG00000059208.16_33865555_33889093_1	chr17	-	1809	13	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	15269	-342	intron_retention	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCTGAGAGAGCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	33889093	33865554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889048
ENSMUSG00000059208.16_33867786_33896306_1	chr17	-	1804	13	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	8056	-2573	intron_retention	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGTAACAGGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	33896306	33867785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889048_33889108_33896247
ENSMUSG00000059208.16_33868569_33896415_1	chr17	-	1860	12	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	7947	-3356	intron_retention	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTTCTTTAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	33896415	33868568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889048_33889108_33896247
ENSMUSG00000059208.16_33868955_33904546_1	chr17	-	1774	13	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	-153	-3742	intron_retention	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGGTGCCCACAGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	33904546	33868954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889048_33889108_33896247_33896410_33904240
ENSMUSG00000059208.16_33868955_33904621_1	chr17	-	1854	13	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	-228	-3742	intron_retention	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGGTGCCCACAGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	33904621	33868954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889048_33889108_33896247_33896415_33904240
ENSMUSG00000059208.16_33869058_33885659_1	chr17	-	933	10	ISM	ENSMUSG00000059208.16	ENSMUST00000139302.8	2428	17	18703	3848	18703	-3845	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGCACCCATTGACCG	NA	NA	NA	NA	NA	NA	NA	NA	33885659	33869057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620
ENSMUSG00000059208.16_33869234_33896306_2	chr17	-	969	13	NNC	ENSMUSG00000059208.16	novel	2428	17	NA	NA	8056	-4021	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTCATGGACCGCATG	NA	NA	NA	NA	NA	NA	NA	NA	33896306	33869233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889048_33889108_33896247
ENSMUSG00000059208.16_33871245_33896415_1	chr17	-	942	12	NNC	ENSMUSG00000059208.16	novel	2428	17	NA	NA	7947	-6032	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAATCACTTAGCTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	33896415	33871244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889048_33889108_33896247
ENSMUSG00000059208.16_33871245_33904949_1	chr17	-	1767	12	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	-556	-6032	intron_retention	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAATCACTTAGCTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	33904949	33871244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889048_33889108_33896247_33896415_33904240
ENSMUSG00000059208.16_33877362_33904345_1	chr17	-	990	12	NNC	ENSMUSG00000059208.16	novel	2428	17	NA	NA	17	-12149	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAATGGCATTTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	33904345	33877361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889048_33889108_33896247_33896415_33904240
ENSMUSG00000059208.16_33877402_33905054_1	chr17	-	1776	11	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	-661	-12189	intron_retention	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGATTTGGATCCGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	33905054	33877401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889048_33889108_33896247_33896415_33904240
ENSMUSG00000059208.16_33884514_33905420_1	chr17	-	1798	6	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	414	-19301	intron_retention	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCATTGTGACTTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	33905420	33884513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33884620_33885467_33885660_33887958_33888053_33889048_33889108_33896247_33896415_33904240
ENSMUSG00000059208.16_33884576_33905488_1	chr17	-	1804	6	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	346	-19363	intron_retention	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCTGGTGTGGTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	33905488	33884575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33884620_33885467_33885660_33887958_33888053_33889048_33889108_33896247_33896415_33904240
ENSMUSG00000059248.14_117123111_117253139_1	chr11	+	3864	11	NNC	ENSMUSG00000059248.14	novel	3869	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1023	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	117123110	117253139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_117123546_117181223_117181863_117242254_117242447_117242979_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUSG00000059248.14_117123111_117253139_2	chr11	+	3864	11	NNC	ENSMUSG00000059248.14	novel	3869	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	117123110	117253139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_117123546_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250249_117250297_117251248
ENSMUSG00000059248.14_117157072_117251570_1	chr11	+	2215	11	FSM	ENSMUSG00000059248.14	ENSMUST00000019038.15	3784	11	0	1569	0	-1564	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGCTAAGCCTGGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	117157071	117251570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_117157422_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUSG00000059248.14_117157261_117251700_1	chr11	+	2156	11	FSM	ENSMUSG00000059248.14	ENSMUST00000019038.15	3784	11	189	1439	189	-1434	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGCAGAGGAGCCCGTTA	NA	NA	NA	NA	NA	NA	NA	NA	117157260	117251700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_117157422_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUSG00000059263.10_111622863_111703677_1	chr7	+	3436	23	ISM	ENSMUSG00000059263.10	ENST00000339865.9	5736	27	268	7198	91	-6013	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCATTGTTTTATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	111622862	111703677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111622954_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556
ENSMUSG00000059263.10_111654047_111706018_1	chr7	+	3378	23	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	31336	4573	31275	-3672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTTAACAAGACGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	111654046	111706018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985
ENSMUSG00000059263.10_111655778_111707812_1	chr7	+	3344	24	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	33067	2779	33006	-1878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGATATTCATCAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	111655777	111707812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780
ENSMUSG00000059263.10_111662453_111709208_1	chr7	+	3360	23	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	39742	1383	39681	-482	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAAGCAGCCGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	111662452	111709208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUSG00000059263.10_111662505_111709264_1	chr7	+	3364	23	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	39794	1327	39733	-426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAAAGCACTCAAGATC	NA	NA	NA	NA	NA	NA	NA	NA	111662504	111709264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUSG00000059263.10_111662566_111709320_1	chr7	+	3359	23	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	39855	1271	39794	-370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGACTGCCAGTGTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	111662565	111709320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUSG00000059263.10_111666356_111709498_1	chr7	+	3360	21	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	43645	1093	43584	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGTTGTGCACTATGGT	NA	NA	NA	NA	NA	NA	NA	NA	111666355	111709498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUSG00000059263.10_111666412_111709555_1	chr7	+	3361	21	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	43701	1036	43640	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCAAAGCCTGCTACTAT	NA	NA	NA	NA	NA	NA	NA	NA	111666411	111709555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUSG00000059263.10_111673715_111709690_1	chr7	+	3430	20	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	51004	901	50943	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGAATGAATCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	111673714	111709690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUSG00000059263.10_111677045_111709865_1	chr7	+	3346	18	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	54334	726	54273	175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGCAAAGTATTAAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	111677044	111709865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUSG00000059263.10_111677096_111709927_1	chr7	+	3357	18	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	54385	664	54324	237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGTGCTCAGCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	111677095	111709927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUSG00000059263.10_111677147_111709983_1	chr7	+	3362	18	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	54436	608	54375	293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTAGAGAATGTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	111677146	111709983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUSG00000059263.10_111685242_111710318_1	chr7	+	3372	14	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	62531	273	62470	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTGTAACTTTGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	111685241	111710318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUSG00000059263.10_111686252_111710429_1	chr7	+	3366	13	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	63541	162	63480	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTCTGCTCTGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	111686251	111710429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUSG00000059263.10_111687052_111710608_1	chr7	+	3405	12	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	64341	-17	64280	17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAACCTCGGGGCACAATA	NA	NA	NA	NA	NA	NA	NA	NA	111687051	111710608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUSG00000059263.10_111688758_111710735_1	chr7	+	3377	11	ISM	ENSMUSG00000059263.10	ENSMUST00000210309.2	5816	29	65986	133	65986	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTATTTAATCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	111688757	111710735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUSG00000059263.10_111688820_111710868_1	chr7	+	3448	11	ISM	ENSMUSG00000059263.10	ENSMUST00000210309.2	5816	29	66048	0	66048	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGATCTGGTCCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	111688819	111710868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUSG00000059278.10_69287095_69287506_1	chr11	+	253	2	FSM	ENSMUSG00000059278.10	ENST00000333775.9	715	2	468	-6	468	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCTGTGTGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	69287094	69287506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69287187_69287345
ENSMUSG00000059291.16_135777042_135779031_1	chr4	-	636	4	ISM	ENSMUSG00000059291.16	ENSMUST00000102536.11	833	6	1673	0	1673	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGGTTTGGATTTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135779031	135777041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924
ENSMUSG00000059291.16_135777258_135780704_1	chr4	-	617	6	FSM	ENSMUSG00000059291.16	ENSMUST00000102536.11	833	6	0	216	0	-216	multi-exon	FALSE	canonical	NA	NA	NA	NA	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACAGTTGTGTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	135780704	135777257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780658
ENSMUSG00000059305.13_16686584_16686963_1	chr16	-	279	2	FSM	ENSMUSG00000059305.13	ENST00000302273.2	405	2	28	98	28	-98	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAACTGCAGCCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	16686963	16686583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_16686829_16686929
ENSMUSG00000059316.3_29692834_29706386_1	chr2	+	2718	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	188	1148	188	-1148	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTAGCCTGAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	29692833	29706386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
ENSMUSG00000059316.3_29695850_29706887_1	chr2	+	2691	11	ISM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	3204	647	3204	-647	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGCCTCTGCACCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	29695849	29706887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
ENSMUSG00000059316.3_29697465_29707155_1	chr2	+	2689	10	ISM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	4819	379	4819	-379	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTACTTGGGTACGA	NA	NA	NA	NA	NA	NA	NA	NA	29697464	29707155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
ENSMUSG00000059316.3_29701240_29707534_1	chr2	+	2692	6	ISM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	8594	0	8594	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGACCCAGAGTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	29701239	29707534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
ENSMUSG00000059325.15_77234835_77242961_1	chr5	-	1078	2	FSM	ENSMUSG00000059325.15	ENSMUST00000120827.9	1217	2	139	0	139	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGAGTCTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	77242961	77234834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_77235664_77242712
ENSMUSG00000059327.10_99353663_99441059_1	chrX	+	1008	7	FSM	ENSMUSG00000059327.10	ENST00000374553.6	4366	7	66	3292	66	297	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTATCATTTGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	99353662	99441059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_99353706_99425060_99425085_99433307_99433488_99434946_99434982_99435938_99435991_99438624_99438750_99440510
ENSMUSG00000059327.10_99433399_99441318_1	chrX	+	1109	5	ISM	ENSMUSG00000059327.10	ENST00000374553.6	4366	7	79802	3033	79802	556	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAACTTCCCACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	99433398	99441318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99433488_99434946_99434982_99435938_99435991_99438624_99438750_99440510
ENSMUSG00000059355.14_85807602_85808656_1	chr8	+	377	4	FSM	ENSMUSG00000059355.14	ENSMUST00000079764.14	922	4	233	312	-15	-135	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATCCTGGACTCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	85807601	85808656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85807693_85807801_85807908_85808405_85808504_85808574
ENSMUSG00000059355.14_85807617_85808791_1	chr8	+	491	4	FSM	ENSMUSG00000059355.14	ENST00000222190.9	465	4	-26	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGCCCTGCTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	85807616	85808791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85807693_85807801_85807908_85808411_85808504_85808574
ENSMUSG00000059355.14_85807617_85808791_2	chr8	+	497	4	FSM	ENSMUSG00000059355.14	ENSMUST00000079764.14	922	4	248	177	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGCCCTGCTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	85807616	85808791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85807693_85807801_85807908_85808405_85808504_85808574
ENSMUSG00000059406.9_80715719_80719829_1	chr10	+	328	4	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	74	15345	74	-15345	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCAGCCCCTGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80715718	80719829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80715798_80718468_80718597_80719552_80719621_80719776
ENSMUSG00000059406.9_80719818_80723253_1	chr10	+	325	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	4173	11921	4173	-11921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCGTGGGAGGAGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	80719817	80723253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80719953_80721859_80722014_80723217
ENSMUSG00000059406.9_80719867_80723314_1	chr10	+	337	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	4222	11860	4222	-11860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCACGAACACTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	80719866	80723314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80719953_80721859_80722014_80723217
ENSMUSG00000059406.9_80721919_80724186_1	chr10	+	334	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	6274	10988	6274	-10988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCGCACACGCGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	80721918	80724186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80722014_80723217_80723390_80724119
ENSMUSG00000059406.9_80723246_80724294_1	chr10	+	319	2	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	7601	10880	7601	-10880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTATGTGCAGCCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80723245	80724294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80723390_80724119
ENSMUSG00000059406.9_80723306_80724362_1	chr10	+	327	2	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	7661	10812	7661	-10812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGCTGGGGTTACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	80723305	80724362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80723390_80724119
ENSMUSG00000059406.9_80724128_80725189_1	chr10	+	293	2	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	8483	9985	8483	-9985	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACGGTGGAATTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80724127	80725189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80724395_80725163
ENSMUSG00000059406.9_80724162_80725256_1	chr10	+	326	2	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	8517	9918	8517	-9918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGTGCCGGCTACCTG	NA	NA	NA	NA	NA	NA	NA	NA	80724161	80725256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80724395_80725163
ENSMUSG00000059406.9_80724275_80726073_1	chr10	+	319	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	8630	9101	8630	-9101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAGCTGGGGAATCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	80724274	80726073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80724395_80725163_80725301_80726011
ENSMUSG00000059406.9_80724321_80726139_1	chr10	+	339	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	8676	9035	8676	-9035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGATTGGATCTTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	80724320	80726139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80724395_80725163_80725301_80726011
ENSMUSG00000059406.9_80725264_80726292_1	chr10	+	318	2	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	9619	8882	9619	-8882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCACTGCACCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	80725263	80726292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80725301_80726011
ENSMUSG00000059406.9_80726037_80728044_1	chr10	+	348	2	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	10392	7130	10392	-7130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCGTGTCTGGGGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	80726036	80728044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80726331_80727990
ENSMUSG00000059406.9_80726110_80728090_1	chr10	+	321	2	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	10465	7084	10465	-7084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGACATTTCTGCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	80726109	80728090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80726331_80727990
ENSMUSG00000059406.9_80726225_80728881_1	chr10	+	340	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	10580	6293	10580	-6293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCGTGAAACTGGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	80726224	80728881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80726331_80727990_80728163_80728819
ENSMUSG00000059406.9_80728053_80729027_1	chr10	+	318	2	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	12408	6147	12408	-6147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGTTCCCAGTCGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	80728052	80729027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80728163_80728819
ENSMUSG00000059406.9_80728820_80730151_1	chr10	+	299	2	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	13175	5023	13175	-5023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCGTGGGCATCATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	80728819	80730151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80729092_80730124
ENSMUSG00000059406.9_80729020_80730740_1	chr10	+	314	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	13375	4434	13375	-4434	internal_fragment	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATATGCACGAATCACACG	NA	NA	NA	NA	NA	NA	NA	NA	80729019	80730740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80729092_80730124_80730262_80730635
ENSMUSG00000059406.9_80729071_80730791_1	chr10	+	314	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	13426	4383	13426	-4383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACCCCAGCTCCATGGC	NA	NA	NA	NA	NA	NA	NA	NA	80729070	80730791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80729092_80730124_80730262_80730635
ENSMUSG00000059406.9_80730206_80730913_1	chr10	+	334	2	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	14561	4261	14561	-4261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGGGCCACCATCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	80730205	80730913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80730262_80730635
ENSMUSG00000059406.9_80730765_80733107_1	chr10	+	353	2	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	15120	2067	15120	-2067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTGAGCCTGTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	80730764	80733107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80731042_80733031
ENSMUSG00000059406.9_80730907_80733712_1	chr10	+	342	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	15262	1462	15262	-1462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCCATTCCTGAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	80730906	80733712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80731042_80733031_80733204_80733677
ENSMUSG00000059406.9_80730963_80733761_1	chr10	+	335	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	15318	1413	15318	-1413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTATCGCCACCCGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	80730962	80733761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80731042_80733031_80733204_80733677
ENSMUSG00000059406.9_80731015_80733828_1	chr10	+	350	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	15370	1346	15370	-1346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCGTGCGCCGCAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	80731014	80733828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80731042_80733031_80733204_80733677
ENSMUSG00000059406.9_80733133_80733940_1	chr10	+	334	2	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	17488	1234	17488	-1234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACACGCATGCGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	80733132	80733940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80733204_80733677
ENSMUSG00000059406.9_80733800_80735070_1	chr10	+	336	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	18155	104	18155	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCACCAGCTGGGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	80733799	80735070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80733941_80734018_80734156_80735012
ENSMUSG00000059406.9_80733866_80735130_1	chr10	+	330	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	18221	44	18221	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTGTGCTGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	80733865	80735130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_80733941_80734018_80734156_80735012
ENSMUSG00000059409.10_46993917_47015928_1	chr17	-	2920	15	NNC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	47015928	46993916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_46995053_46995192_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ENSMUSG00000059409.10_46993917_47015928_2	chr17	-	2920	15	NNC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	47015928	46993916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_46995053_46995186_46995304_46995431_46995499_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ENSMUSG00000059409.10_46993917_47015928_3	chr17	-	2920	15	NNC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	47015928	46993916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998950_47010994_47011073_47015758
ENSMUSG00000059430.15_83489894_83500232_1	chr6	-	921	6	ISM	ENSMUSG00000059430.15	ENSMUST00000121731.8	1273	9	4740	0	4740	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCTCTGTGTGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	83500232	83489893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83490111_83493249_83493432_83496749_83496942_83497637_83497800_83499797_83499883_83500149
ENSMUSG00000059430.15_83489894_83504372_1	chr6	-	1153	8	ISM	ENSMUSG00000059430.15	ENSMUST00000121731.8	1273	9	600	0	600	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCTCTGTGTGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	83504372	83489893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83490111_83493249_83493432_83496749_83496942_83497637_83497800_83499797_83499883_83500149_83500261_83503787_83503917_83504297
ENSMUSG00000059430.15_83490081_83503884_1	chr6	-	859	7	ISM	ENSMUSG00000059430.15	ENSMUST00000121731.8	1273	9	1088	187	1088	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGATTGGCGGCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	83503884	83490080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83490111_83493249_83493432_83496749_83496942_83497637_83497800_83499797_83499883_83500149_83500261_83503787
ENSMUSG00000059430.15_83493312_83504314_1	chr6	-	816	7	ISM	ENSMUSG00000059430.15	ENSMUST00000121731.8	1273	9	658	3418	658	-3418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGCTGACAGGATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	83504314	83493311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83493432_83496749_83496942_83497637_83497800_83499797_83499883_83500149_83500261_83503787_83503917_83504297
ENSMUSG00000059430.15_83493367_83504362_1	chr6	-	809	7	ISM	ENSMUSG00000059430.15	ENSMUST00000121731.8	1273	9	610	3473	610	-3473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCAAAGATTTGTATGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	83504362	83493366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83493432_83496749_83496942_83497637_83497800_83499797_83499883_83500149_83500261_83503787_83503917_83504297
ENSMUSG00000059430.15_83493412_83504473_1	chr6	-	875	7	ISM	ENSMUSG00000059430.15	ENSMUST00000121731.8	1273	9	499	3518	499	-3518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGAAACAACATACAATTC	NA	NA	NA	NA	NA	NA	NA	NA	83504473	83493411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83493432_83496749_83496942_83497637_83497800_83499797_83499883_83500149_83500261_83503787_83503917_83504297
ENSMUSG00000059430.15_83496751_83513205_1	chr6	-	884	7	ISM	ENSMUSG00000059430.15	ENSMUST00000075161.12	1333	9	42	6864	36	-6857	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	682	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGGTGCTGCCTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	83513205	83496750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83496942_83497637_83497800_83499797_83499883_83500149_83500261_83503787_83503917_83504297_83504460_83513161
ENSMUSG00000059430.15_83496892_83504473_1	chr6	-	584	5	ISM	ENSMUSG00000059430.15	ENST00000409731.7	1269	8	8768	7076	499	-6998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATTTCGAGAATGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	83504473	83496891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83496942_83497637_83497800_83499797_83499883_83500149_83500261_83504297
ENSMUSG00000059430.15_83496892_83513205_1	chr6	-	743	7	ISM	ENSMUSG00000059430.15	ENSMUST00000075161.12	1333	9	42	7005	36	-6998	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATTTCGAGAATGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	83513205	83496891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83496942_83497637_83497800_83499797_83499883_83500149_83500261_83503787_83503917_83504297_83504460_83513161
ENSMUSG00000059430.15_83497665_83513205_1	chr6	-	537	5	ISM	ENSMUSG00000059430.15	ENST00000409731.7	1269	8	36	7849	36	-7771	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGGCTATTCCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	83513205	83497664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83497800_83499797_83499883_83500149_83500261_83504297_83504460_83513161
ENSMUSG00000059434.10_31464408_31483835_1	chr5	+	840	8	ISM	ENSMUSG00000059434.10	ENSMUST00000201166.4	2272	19	9621	823	8901	-565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCCTTCCCCGGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	31464407	31483835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31464509_31464664_31464763_31465098_31465176_31465528_31465626_31466179_31466278_31466364_31466449_31481915_31482066_31483700
ENSMUSG00000059434.10_31464700_31484341_1	chr5	+	775	8	ISM	ENSMUSG00000059434.10	ENSMUST00000201166.4	2272	19	9913	317	9193	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTTCAGTCTGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	31464699	31484341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31464763_31465098_31465176_31465528_31465626_31466179_31466278_31466364_31466449_31481915_31482066_31483700_31483836_31484270
ENSMUSG00000059436.14_76984043_77008959_1	chr12	-	1683	2	FSM	ENSMUSG00000059436.14	ENST00000555932.5	1611	2	-38	-34	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTAGTGTCTTCTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	77008959	76984042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_76985530_77008763
ENSMUSG00000059436.14_76986164_76986866_1	chr12	-	251	2	ISM	ENSMUSG00000059436.14	ENST00000555667.5	564	4	22104	0	21933	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGGGTGACCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	76986866	76986163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_76986289_76986740
ENSMUSG00000059436.14_76986164_76999943_1	chr12	-	250	3	ISM	ENSMUSG00000059436.14	ENST00000555667.5	564	4	9027	0	8856	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGGGTGACCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	76999943	76986163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_76986289_76986740_76986865_76999942
ENSMUSG00000059436.14_76986245_77000050_1	chr12	-	276	3	ISM	ENSMUSG00000059436.14	ENST00000555667.5	564	4	8920	81	8749	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTTCCTCCCTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	77000050	76986244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_76986289_76986740_76986865_76999942
ENSMUSG00000059436.14_76986245_77008799_1	chr12	-	791	4	FSM	ENSMUSG00000059436.14	ENST00000284165.10	3053	4	138	2124	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTTCCTCCCTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	77008799	76986244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_76986865_76999942_77000051_77008036_77008064_77008763
ENSMUSG00000059436.14_76986739_77008799_1	chr12	-	270	3	ISM	ENSMUSG00000059436.14	ENST00000557746.5	564	5	171	494	0	-494	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAACCAAGCTCATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	77008799	76986738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_76986865_76999942_77000051_77008763
ENSMUSG00000059436.14_76999992_77008959_1	chr12	-	255	2	ISM	ENSMUSG00000059436.14	ENST00000557746.5	564	5	11	13747	0	-13747	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTCACAGTTTGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	77008959	76999991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_77000051_77008763
ENSMUSG00000059447.14_30360246_30389591_1	chr5	+	2026	16	NNC	ENSMUSG00000059447.14	novel	2033	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGTCTCGTTATTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	30360245	30389591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379963_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUSG00000059447.14_30360246_30389591_3	chr5	+	2027	16	NNC	ENSMUSG00000059447.14	novel	2033	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGTCTCGTTATTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	30360245	30389591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385318_30385388_30385918_30386084_30389050
ENSMUSG00000059447.14_30360246_30389591_4	chr5	+	2073	16	NNC	ENSMUSG00000059447.14	novel	2033	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	865	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGTCTCGTTATTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	30360245	30389591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_30360385_30368673_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUSG00000059447.14_30360246_30389591_5	chr5	+	2028	16	NNC	ENSMUSG00000059447.14	novel	2033	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGTCTCGTTATTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	30360245	30389591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381890_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUSG00000059447.14_30360246_30389591_6	chr5	+	2025	16	NNC	ENSMUSG00000059447.14	novel	2033	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	838	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGTCTCGTTATTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	30360245	30389591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373529_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUSG00000059447.14_30360246_30389591_7	chr5	+	2026	16	NNC	ENSMUSG00000059447.14	novel	2033	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGTCTCGTTATTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	30360245	30389591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_30360338_30368673_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUSG00000059447.14_30360246_30389591_8	chr5	+	2026	16	NNC	ENSMUSG00000059447.14	novel	2033	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGTCTCGTTATTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	30360245	30389591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_30360338_30368666_30368742_30369030_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUSG00000059474.14_93795979_93836038_2	chr11	+	3258	15	FSM	ENSMUSG00000059474.14	ENST00000415868.5	5020	15	-3	1765	0	-109	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCACTTCCTCTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	93795978	93836038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_93796185_93799629_93799764_93801108_93801224_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ENSMUSG00000059474.14_93795979_93836147_1	chr11	+	3367	15	FSM	ENSMUSG00000059474.14	ENST00000415868.5	5020	15	-3	1656	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGTAAAAAGAATGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	93795978	93836147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_93796185_93799629_93799764_93801108_93801224_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ENSMUSG00000059474.14_93796093_93836147_1	chr11	+	3262	15	ISM	ENSMUSG00000059474.14	ENSMUST00000107854.9	5232	16	19048	1664	111	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGTAAAAAGAATGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	93796092	93836147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ENSMUSG00000059474.14_93796106_93836147_1	chr11	+	3240	15	FSM	ENSMUSG00000059474.14	ENST00000415868.5	5020	15	124	1656	124	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGTAAAAAGAATGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	93796105	93836147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_93796185_93799629_93799764_93801108_93801224_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ENSMUSG00000059474.14_93801104_93836296_1	chr11	+	3181	13	ISM	ENSMUSG00000059474.14	ENST00000415868.5	5020	15	5122	1507	5122	149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTTTACCTCATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	93801103	93836296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_93801224_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ENSMUSG00000059474.14_93801153_93836357_1	chr11	+	3193	13	ISM	ENSMUSG00000059474.14	ENST00000415868.5	5020	15	5171	1446	5171	210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTAAAATGTGTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	93801152	93836357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_93801224_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ENSMUSG00000059474.14_93801161_93836380_1	chr11	+	3217	13	ISM	ENSMUSG00000059474.14	ENSMUST00000107854.9	5232	16	24116	1431	5179	233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGTAAAAATGTATGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	93801160	93836380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ENSMUSG00000059474.14_93801190_93836434_1	chr11	+	3233	13	ISM	ENSMUSG00000059474.14	ENST00000415868.5	5020	15	5208	1369	5208	287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAAATGCAGATCACATC	NA	NA	NA	NA	NA	NA	NA	NA	93801189	93836434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_93801224_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ENSMUSG00000059474.14_93812296_93836691_1	chr11	+	3270	11	ISM	ENSMUSG00000059474.14	ENST00000415868.5	5020	15	16314	1112	16314	544	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCAAGAAGCCTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	93812295	93836691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ENSMUSG00000059474.14_93814689_93836863_1	chr11	+	3220	9	ISM	ENSMUSG00000059474.14	ENST00000415868.5	5020	15	18707	940	18707	716	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGGCTTGGCGTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	93814688	93836863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ENSMUSG00000059474.14_93815400_93837014_1	chr11	+	3205	8	ISM	ENSMUSG00000059474.14	ENST00000415868.5	5020	15	19418	789	19418	-789	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAACCAGAGGAGGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	93815399	93837014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ENSMUSG00000059474.14_93820455_93837315_1	chr11	+	3244	5	ISM	ENSMUSG00000059474.14	ENST00000415868.5	5020	15	24473	488	24473	-488	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGGTGCTATATATTT	NA	NA	NA	NA	NA	NA	NA	NA	93820454	93837315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ENSMUSG00000059474.14_93823177_93837628_1	chr11	+	3210	3	ISM	ENSMUSG00000059474.14	ENST00000415868.5	5020	15	27195	175	27195	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATATAATGGCGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	93823176	93837628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_93823281_93824706_93824785_93834600
ENSMUSG00000059474.14_93824707_93837811_1	chr11	+	3289	2	ISM	ENSMUSG00000059474.14	ENST00000415868.5	5020	15	28725	-8	28725	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	NA	NA	NA	NA	NA	NA	NA	93824706	93837811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_93824785_93834600
ENSMUSG00000059481.6_12621949_12638010_1	chr17	+	920	7	FSM	ENSMUSG00000059481.6	ENST00000454031.6	921	7	1	0	1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTAGGTGGAAGGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	12621948	12638010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_12622120_12622899_12623049_12624058_12624153_12627876_12628001_12633064_12633172_12637552_12637670_12637852
ENSMUSG00000059481.6_12621949_12638010_2	chr17	+	914	7	NNC	ENSMUSG00000059481.6	novel	921	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTAGGTGGAAGGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	12621948	12638010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_12622120_12622899_12623049_12624058_12624153_12627882_12628001_12633064_12633172_12637552_12637670_12637852
ENSMUSG00000059481.6_12621949_12638010_3	chr17	+	915	7	NNC	ENSMUSG00000059481.6	novel	921	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTAGGTGGAAGGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	12621948	12638010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_12622120_12622899_12623049_12624058_12624153_12627876_12628001_12633069_12633172_12637552_12637670_12637852
ENSMUSG00000059481.6_12621949_12638010_4	chr17	+	914	7	NNC	ENSMUSG00000059481.6	novel	921	7	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	947	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTAGGTGGAAGGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	12621948	12638010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_12622120_12622899_12623049_12624058_12624153_12627876_12628001_12633064_12633172_12637558_12637670_12637852
ENSMUSG00000059482.16_10874565_10898425_1	chr4	+	1056	6	FSM	ENSMUSG00000059482.16	ENSMUST00000101504.3	2053	6	-3	1000	-3	-996	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGAGTGTTCATGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	10874564	10898425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_10874773_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10897895
ENSMUSG00000059482.16_10874675_10898547_1	chr4	+	1068	6	FSM	ENSMUSG00000059482.16	ENSMUST00000101504.3	2053	6	107	878	107	-874	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCCTGCCTTTTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	10874674	10898547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_10874773_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10897895
ENSMUSG00000059482.16_10881801_10898724_1	chr4	+	1059	4	ISM	ENSMUSG00000059482.16	ENSMUST00000101504.3	2053	6	7233	701	7233	-697	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAAGTTACTAAAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	10881800	10898724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_10881869_10882406_10882473_10893262_10893359_10897895
ENSMUSG00000059482.16_10893261_10898908_1	chr4	+	1108	2	ISM	ENSMUSG00000059482.16	ENSMUST00000080517.14	2116	6	18763	513	18693	-513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAGATGGGAGGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	10893260	10898908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_10893359_10897898
ENSMUSG00000059493.14_160618466_160622831_1	chrX	-	1989	2	ISM	ENSMUSG00000059493.14	ENST00000617601.4	8149	8	86742	2171	86742	1345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGAGGGTGGTGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	160622831	160618465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_160620418_160622794
ENSMUSG00000059493.14_160618584_160622923_1	chrX	-	1963	2	ISM	ENSMUSG00000059493.14	ENST00000617601.4	8149	8	86650	2289	86650	1227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGTATATGCATTATT	NA	NA	NA	NA	NA	NA	NA	NA	160622923	160618583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_160620418_160622794
ENSMUSG00000059493.14_160618982_160623626_1	chrX	-	1989	3	ISM	ENSMUSG00000059493.14	ENST00000617601.4	8149	8	85947	2687	85947	829	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAACCAATGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	160623626	160618981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_160620418_160622794_160622922_160623200
ENSMUSG00000059493.14_160619186_160623807_1	chrX	-	1966	3	ISM	ENSMUSG00000059493.14	ENST00000617601.4	8149	8	85766	2891	85766	625	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAGTGATAAACCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	160623807	160619185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_160620418_160622794_160622922_160623200
ENSMUSG00000059493.14_160619811_160624401_1	chrX	-	1935	3	ISM	ENSMUSG00000059493.14	ENST00000617601.4	8149	8	85172	3516	85172	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCTGAGCCAAGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	160624401	160619810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_160620418_160622794_160622922_160623200
ENSMUSG00000059493.14_160622823_160625124_1	chrX	-	2023	2	ISM	ENSMUSG00000059493.14	ENST00000617601.4	8149	8	84449	6528	84449	-3012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGACCTATTTGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	160625124	160622822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_160622922_160623200
ENSMUSG00000059493.14_160622874_160625187_1	chrX	-	2035	2	ISM	ENSMUSG00000059493.14	ENST00000617601.4	8149	8	84386	6579	84386	-3063	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGCTGGAGCTGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	160625187	160622873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_160622922_160623200
ENSMUSG00000059493.14_160624373_160630070_1	chrX	-	1992	3	ISM	ENSMUSG00000059493.14	ENST00000617601.4	8149	8	79503	8078	79503	-4562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTAGCATCTCCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	160630070	160624372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_160626180_160627167_160627300_160630017
ENSMUSG00000059493.14_160624561_160654516_1	chrX	-	1996	4	ISM	ENSMUSG00000059493.14	ENST00000617601.4	8149	8	55057	8266	55057	-4750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAACGAATGATCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	160654516	160624560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_160626180_160627167_160627300_160630017_160630211_160654464
ENSMUSG00000059493.14_160624771_160658355_1	chrX	-	1988	5	ISM	ENSMUSG00000059493.14	ENST00000617601.4	8149	8	51218	8476	51218	-4960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCCAGGGAAATGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	160658355	160624770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_160626180_160627167_160627300_160630017_160630211_160654464_160654599_160658235
ENSMUSG00000059493.14_160624888_160709357_1	chrX	-	1996	6	ISM	ENSMUSG00000059493.14	ENST00000617601.4	8149	8	216	8593	216	-5077	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGGCAAAGCCAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	160709357	160624887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_160626180_160627167_160627300_160630017_160630211_160654464_160654599_160658235_160658389_160709265
ENSMUSG00000059493.14_160624967_160709444_1	chrX	-	2004	6	ISM	ENSMUSG00000059493.14	ENST00000617601.4	8149	8	129	8672	129	-5156	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTCTTCCGGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	160709444	160624966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_160626180_160627167_160627300_160630017_160630211_160654464_160654599_160658235_160658389_160709265
ENSMUSG00000059493.14_160625030_160709499_1	chrX	-	1996	6	ISM	ENSMUSG00000059493.14	ENST00000617601.4	8149	8	74	8735	74	-5219	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACCTATGTCTGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	160709499	160625029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_160626180_160627167_160627300_160630017_160630211_160654464_160654599_160658235_160658389_160709265
ENSMUSG00000059495.15_42886004_42887388_1	chr9	-	310	4	ISM	ENSMUSG00000059495.15	ENST00000356641.7	6788	40	129445	7411	129393	-7411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATCTCTTTGTGACCGC	NA	NA	NA	NA	NA	NA	NA	NA	42887388	42886003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_42886087_42886328_42886409_42886523_42886611_42887328
ENSMUSG00000059495.15_42897764_42901389_1	chr9	-	325	3	ISM	ENSMUSG00000059495.15	ENST00000356641.7	6788	40	115444	19171	115392	-19171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCAAGTAAGTTAAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	42901389	42897763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_42897884_42900255_42900342_42901270
ENSMUSG00000059495.15_42912742_42917214_1	chr9	-	331	4	ISM	ENSMUSG00000059495.15	ENST00000356641.7	6788	40	99619	34149	99567	-34149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCTGGGGTTAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	42917214	42912741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_42912848_42913153_42913197_42916839_42916939_42917131
ENSMUSG00000059518.15_137013732_137015683_1	chr5	-	191	2	ISM	ENSMUSG00000059518.15	ENSMUST00000085941.12	740	5	72	2688	72	-2557	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATGGGGGTTAGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	137015683	137013731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137013904_137015664
ENSMUSG00000059534.9_4652098_4654334_1	chr11	-	301	2	FSM	ENSMUSG00000059534.9	ENSMUST00000058407.6	434	2	8	125	-3	-125	multi-exon	FALSE	canonical	NA	NA	NA	NA	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCAAGTTGCCGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	4654334	4652097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_4652221_4654156
ENSMUSG00000059534.9_4652179_4654161_1	chr11	-	103	2	FSM	ENSMUSG00000059534.9	ENST00000401406.3	536	2	170	263	170	-206	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACCCTGCCCCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	4654161	4652178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_4652221_4654100
ENSMUSG00000059540.16_181322103_181328521_1	chr2	+	745	7	ISM	ENSMUSG00000059540.16	ENSMUST00000103042.10	1183	10	0	1343	0	-1343	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATAGCTGTGATGACATC	NA	NA	NA	NA	NA	NA	NA	NA	181322102	181328521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_181322269_181325005_181325069_181325340_181325447_181326235_181326327_181327584_181327716_181327982_181328040_181328390
ENSMUSG00000059552.14_69471231_69478296_1	chr11	+	315	4	ISM	ENSMUSG00000059552.14	ENSMUST00000108657.4	1822	11	0	4403	0	-3962	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGGACCCTGTCACCGA	NA	NA	NA	NA	NA	NA	NA	NA	69471230	69478296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197
ENSMUSG00000059552.14_69471231_69482564_1	chr11	+	1687	11	FSM	ENSMUSG00000059552.14	ENSMUST00000108657.4	1822	11	0	135	0	-134	multi-exon	FALSE	canonical	NA	NA	NA	NA	2812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCCTACTTTCCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	69471230	69482564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
ENSMUSG00000059552.14_69478389_69479507_1	chr11	+	310	3	ISM	ENSMUSG00000059552.14	ENSMUST00000108657.4	1822	11	7158	3192	-782	-2751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGACAGGCAGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	69478388	69479507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_69478459_69479189_69479374_69479451
ENSMUSG00000059552.14_69479189_69482258_1	chr11	+	849	7	NNC	ENSMUSG00000059552.14	novel	873	7	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGCATCCCGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	69479188	69482258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_69479368_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480705_69481451_69481589_69482175
ENSMUSG00000059552.14_69479189_69482258_2	chr11	+	855	7	FSM	ENSMUSG00000059552.14	ENST00000504290.5	873	7	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGCATCCCGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	69479188	69482258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480705_69481451_69481589_69482175
ENSMUSG00000059555.7_25082978_25086771_1	chr2	-	3128	2	FSM	ENSMUSG00000059555.7	ENSMUST00000081869.7	3255	2	127	0	127	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCACCTTCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	25086771	25082977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_25085938_25086603
ENSMUSG00000059562.15_25383107_25389905_1	chr17	+	1076	10	NNC	ENSMUSG00000059562.15	novel	1451	12	NA	NA	40	-747	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGAGGAGAACCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	25383106	25389905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_25383165_25383480_25383605_25386276_25386373_25386661_25386809_25386860_25386989_25387283_25387411_25387501_25387645_25389090_25389205_25389532_25389610_25389843
ENSMUSG00000059562.15_25383108_25389913_1	chr17	+	1089	10	ISM	ENSMUSG00000059562.15	ENST00000389176.3	1451	12	41	739	41	-739	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACCCTGGACGGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	25383107	25389913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25383165_25383480_25383605_25386270_25386373_25386661_25386809_25386860_25386989_25387283_25387411_25387501_25387645_25389090_25389205_25389532_25389610_25389843
ENSMUSG00000059562.15_25383474_25390180_1	chr17	+	1164	10	NNC	ENSMUSG00000059562.15	novel	1451	12	NA	NA	407	-472	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAGAAAACTCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	25383473	25390180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_25383605_25386270_25386373_25386661_25386809_25386860_25386989_25387283_25387411_25387501_25387645_25389090_25389205_25389532_25389610_25389847_25389962_25390099
ENSMUSG00000059562.15_25383474_25390180_2	chr17	+	1163	10	NIC	ENSMUSG00000059562.15	novel	1451	12	NA	NA	407	-472	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAGAAAACTCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	25383473	25390180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_+_25383605_25386270_25386373_25386661_25386809_25386860_25386989_25387283_25387411_25387501_25387640_25389090_25389205_25389532_25389610_25389843_25389962_25390099
ENSMUSG00000059562.15_25383474_25390180_3	chr17	+	1169	10	ISM	ENSMUSG00000059562.15	ENSMUST00000073277.12	2417	17	2039	707	407	-472	internal_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAGAAAACTCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	25383473	25390180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25383605_25386270_25386373_25386661_25386809_25386860_25386989_25387283_25387411_25387501_25387640_25389084_25389205_25389532_25389610_25389843_25389962_25390099
ENSMUSG00000059562.15_25383562_25390486_1	chr17	+	1106	11	ISM	ENSMUSG00000059562.15	ENST00000389176.3	1451	12	495	166	495	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCATGCTGCGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	25383561	25390486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25383605_25386270_25386373_25386661_25386809_25386860_25386989_25387283_25387411_25387501_25387645_25389090_25389205_25389532_25389610_25389843_25389962_25390099_25390181_25390460
ENSMUSG00000059562.15_25386268_25390597_1	chr17	+	1178	10	ISM	ENSMUSG00000059562.15	ENSMUST00000073277.12	2417	17	4833	290	3201	-55	internal_fragment	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGACGCAATGGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	25386267	25390597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25386373_25386661_25386809_25386860_25386989_25387283_25387411_25387501_25387640_25389084_25389205_25389532_25389610_25389843_25389962_25390099_25390181_25390460
ENSMUSG00000059562.15_25386268_25390597_2	chr17	+	1177	10	ISM	ENSMUSG00000059562.15	ENST00000389176.3	1451	12	3201	55	3201	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGACGCAATGGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	25386267	25390597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_25386373_25386661_25386809_25386860_25386989_25387283_25387411_25387501_25387645_25389090_25389205_25389532_25389610_25389843_25389962_25390099_25390181_25390460
ENSMUSG00000059562.15_25386268_25390597_3	chr17	+	1173	10	NNC	ENSMUSG00000059562.15	novel	1451	12	NA	NA	3201	-55	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGACGCAATGGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	25386267	25390597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_25386373_25386661_25386809_25386860_25386989_25387283_25387411_25387501_25387645_25389090_25389205_25389536_25389610_25389843_25389962_25390099_25390181_25390460
ENSMUSG00000059562.15_25386659_25390652_1	chr17	+	1123	9	NNC	ENSMUSG00000059562.15	novel	1451	12	NA	NA	3592	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGAGAGCCTGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	25386658	25390652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_25386809_25386860_25386989_25387283_25387411_25387508_25387645_25389090_25389205_25389532_25389610_25389843_25389962_25390099_25390181_25390460
ENSMUSG00000059586.11_59250715_59473533_1	chr15	+	987	6	ISM	ENSMUSG00000059586.11	ENSMUST00000079703.11	1054	7	4579	0	4579	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	59250714	59473533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_59250888_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
ENSMUSG00000059586.11_59250715_59473533_2	chr15	+	981	6	NNC	ENSMUSG00000059586.11	novel	1054	7	NA	NA	4579	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	967	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	59250714	59473533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_59250888_59287879_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
ENSMUSG00000059586.11_59250715_59473533_3	chr15	+	984	6	NNC	ENSMUSG00000059586.11	novel	1054	7	NA	NA	4579	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	59250714	59473533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_59250888_59287873_59287985_59327168_59327316_59463545_59463647_59463986_59464094_59473188
ENSMUSG00000059610.6_59462195_59464311_1	chr11	-	156	2	FSM	ENSMUSG00000059610.6	ENST00000641149.1	928	2	191	581	191	-581	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCGCTACGTGGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	59464311	59462194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_59462286_59464246
ENSMUSG00000059669.9_24548610_24559493_1	chr12	+	365	5	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	252	49045	0	-254	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAAACAGGCCTATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	24548609	24559493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24548649_24550434_24550534_24554945_24555034_24559082_24559181_24559452
ENSMUSG00000059669.9_24550465_24564870_1	chr12	+	438	5	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	2107	43668	1855	5123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCCAATCTGACCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	24550464	24564870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24550534_24554945_24555034_24559082_24559181_24559452_24559549_24564783
ENSMUSG00000059669.9_24554992_24566902_1	chr12	+	432	5	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	6634	41636	6382	7155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGAGAAGGGGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24554991	24566902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24555034_24559082_24559181_24559452_24559549_24564783_24564935_24566857
ENSMUSG00000059669.9_24559466_24573163_1	chr12	+	448	4	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	11108	35375	10856	13416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTATGGTCGTGACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	24559465	24573163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24559549_24564783_24564935_24566857_24567009_24573100
ENSMUSG00000059669.9_24564783_24594285_1	chr12	+	419	4	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	16425	14253	16173	-14253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACATCTATAAAAACATG	NA	NA	NA	NA	NA	NA	NA	NA	24564782	24594285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24564935_24566857_24567009_24573100_24573201_24594269
ENSMUSG00000059669.9_24564832_24594343_1	chr12	+	428	4	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	16474	14195	16222	-14195	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACATAACGGAAGACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	24564831	24594343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24564935_24566857_24567009_24573100_24573201_24594269
ENSMUSG00000059669.9_24564888_24594402_1	chr12	+	431	4	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	16530	14136	16278	-14136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCAATCTCCCTGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	24564887	24594402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24564935_24566857_24567009_24573100_24573201_24594269
ENSMUSG00000059669.9_24566895_24597078_1	chr12	+	429	4	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	18537	11460	18285	-11460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGATCCTATAGCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24566894	24597078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24567009_24573100_24573201_24594269_24594418_24597011
ENSMUSG00000059669.9_24566934_24597150_1	chr12	+	462	4	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	18576	11388	18324	-11388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAAGCTGCTGTTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	24566933	24597150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24567009_24573100_24573201_24594269_24594418_24597011
ENSMUSG00000059669.9_24597054_24606598_1	chr12	+	426	5	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	48696	1940	48444	-1940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTTCAACTGGACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	24597053	24606598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517
ENSMUSG00000059669.9_24597161_24606711_1	chr12	+	432	5	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	48803	1827	48551	-1827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCAGTACCCAGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	24597160	24606711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517
ENSMUSG00000059669.9_24599442_24608249_1	chr12	+	449	4	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	51084	289	50832	-289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGACCTCTGCTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	24599441	24608249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24599509_24605988_24606060_24606517_24606741_24608161
ENSMUSG00000059669.9_24606658_24608538_1	chr12	+	460	2	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	58300	0	58048	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACCTGGAAACTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	24606657	24608538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_24606741_24608161
ENSMUSG00000059674.8_54868688_54869153_1	chr14	-	376	2	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	9641	0	9641	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGAGCCCGCTTCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	54869153	54868687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54868991_54869080
ENSMUSG00000059674.8_54868848_54869300_1	chr14	-	363	2	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	9494	160	9494	-160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCATCCCAGCTCTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	54869300	54868847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54868991_54869080
ENSMUSG00000059674.8_54868912_54869349_1	chr14	-	348	2	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	9445	224	9445	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCACCTCCTAGGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	54869349	54868911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54868991_54869080
ENSMUSG00000059674.8_54870550_54871139_1	chr14	-	348	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	7655	1862	7655	-1862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGAGCCCTGCTTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	54871139	54870549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54870753_54870915_54871028_54871106
ENSMUSG00000059674.8_54870599_54871199_1	chr14	-	359	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	7595	1911	7595	-1911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCATCCTGCTGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	54871199	54870598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54870753_54870915_54871028_54871106
ENSMUSG00000059674.8_54870704_54873844_1	chr14	-	338	4	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	4950	2016	4950	-2016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCCCTACCTGATTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	54873844	54870703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54870753_54870915_54871028_54871106_54871229_54873789
ENSMUSG00000059674.8_54870966_54874805_1	chr14	-	349	4	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	3989	2278	3989	-2278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCCTGTGGGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	54874805	54870965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54871028_54871106_54871229_54873789_54873927_54874777
ENSMUSG00000059674.8_54873891_54875507_1	chr14	-	337	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	3287	5203	3287	-5203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCCATTGAGCCCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	54875507	54873890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54873927_54874777_54875032_54875460
ENSMUSG00000059674.8_54874891_54875809_1	chr14	-	355	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	2985	6203	2985	-6203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTCACCCAGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	54875809	54874890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54875032_54875460_54875649_54875783
ENSMUSG00000059674.8_54874951_54875852_1	chr14	-	338	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	2942	6263	2942	-6263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGTCCCTTCAAGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	54875852	54874950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54875032_54875460_54875649_54875783
ENSMUSG00000059674.8_54874999_54875916_1	chr14	-	354	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	2878	6311	2878	-6311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCGTGTAGAAGCCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	54875916	54874998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54875032_54875460_54875649_54875783
ENSMUSG00000059674.8_54875507_54876064_1	chr14	-	350	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	2730	6819	2730	-6819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACAGACTCCCAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	54876064	54875506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54875649_54875783_54875952_54876024
ENSMUSG00000059674.8_54875627_54876365_1	chr14	-	348	4	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	2429	6939	2429	-6939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACAGCTGGACCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	54876365	54875626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54875649_54875783_54875952_54876024_54876145_54876327
ENSMUSG00000059674.8_54875820_54876420_1	chr14	-	345	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	2374	7132	2374	-7132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGATGTCAACGACAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	54876420	54875819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54875952_54876024_54876145_54876327
ENSMUSG00000059674.8_54875874_54876467_1	chr14	-	338	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	2327	7186	2327	-7186	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGCCACATGGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	54876467	54875873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54875952_54876024_54876145_54876327
ENSMUSG00000059674.8_54875917_54876525_1	chr14	-	353	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	2269	7229	2269	-7229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCCAAGAGGAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	54876525	54875916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54875952_54876024_54876145_54876327
ENSMUSG00000059674.8_54876116_54876841_1	chr14	-	365	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	1953	7428	1953	-7428	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCCGACGATCCCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	54876841	54876115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54876145_54876327_54876623_54876800
ENSMUSG00000059674.8_54876396_54876913_1	chr14	-	340	2	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	1881	7708	1881	-7708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGACAATCCGCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	54876913	54876395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54876623_54876800
ENSMUSG00000059674.8_54876465_54876984_1	chr14	-	342	2	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	1810	7777	1810	-7777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGGACCGTGCCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	54876984	54876464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54876623_54876800
ENSMUSG00000059674.8_54876518_54877046_1	chr14	-	351	2	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	1748	7830	1748	-7830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACCAAGAGCCTGGATCG	NA	NA	NA	NA	NA	NA	NA	NA	54877046	54876517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_54876623_54876800
ENSMUSG00000059689.16_117818242_117822618_1	chr6	+	932	3	FSM	ENSMUSG00000059689.16	ENSMUST00000112860.2	1231	3	0	299	0	244	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTCCACACGGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	117818241	117822618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_117818359_117820213_117820354_117821943
ENSMUSG00000059689.16_117818242_117822666_1	chr6	+	980	3	FSM	ENSMUSG00000059689.16	ENSMUST00000112860.2	1231	3	0	251	0	-250	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTCACTCAGAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	117818241	117822666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_117818359_117820213_117820354_117821943
ENSMUSG00000059713.13_135143751_135147732_1	chr4	-	477	3	ISM	ENSMUSG00000059713.13	ENST00000425530.3	654	4	4971	0	4971	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGACTGTGCACTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	135147732	135143750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135143910_135145690_135145833_135147556
ENSMUSG00000059713.13_135143751_135147732_2	chr4	-	476	3	NNC	ENSMUSG00000059713.13	novel	654	4	NA	NA	4971	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGACTGTGCACTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	135147732	135143750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_135143910_135145690_135145833_135147557
ENSMUSG00000059713.13_135143866_135145834_1	chr4	-	188	2	ISM	ENSMUSG00000059713.13	ENST00000425530.3	654	4	6869	115	6869	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTGCACGTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	135145834	135143865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135143910_135145690
ENSMUSG00000059713.13_135143866_135152597_1	chr4	-	433	4	FSM	ENSMUSG00000059713.13	ENST00000425530.3	654	4	106	115	106	-115	multi-exon	FALSE	canonical	NA	NA	NA	NA	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTGCACGTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	135152597	135143865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_135143910_135145690_135145833_135147556_135147731_135152524
ENSMUSG00000059713.13_135145754_135152597_1	chr4	-	182	2	ISM	ENSMUSG00000059713.13	ENST00000436717.6	510	3	106	2003	106	-2003	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGATGCGATGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	135152597	135145753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_135145863_135152524
ENSMUSG00000059714.14_36135566_36136367_1	chr17	+	201	3	ISM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	1444	7316	1327	-7135	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGCTCGGATTGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	36135565	36136367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36135602_36135724_36135845_36136322
ENSMUSG00000059714.14_36136394_36140759_1	chr17	+	203	3	ISM	ENSMUSG00000059714.14	ENSMUST00000174080.8	1383	12	2155	2743	2155	-2743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCAGCGGGTGCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	36136393	36140759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36136419_36136629_36136783_36140734
ENSMUSG00000059714.14_36136629_36140767_1	chr17	+	187	2	ISM	ENSMUSG00000059714.14	ENSMUST00000174080.8	1383	12	2390	2735	2390	-2735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTGCAGGTGCAGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	36136628	36140767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_36136783_36140734
ENSMUSG00000059734.8_3958870_3961256_1	chr19	-	603	4	ISM	ENSMUSG00000059734.8	ENSMUST00000236801.2	1005	7	1232	7	1232	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTACCTGTTGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	3961256	3958869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160
ENSMUSG00000059734.8_3958870_3961616_1	chr19	-	654	5	ISM	ENSMUSG00000059734.8	ENSMUST00000236801.2	1005	7	872	7	872	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTACCTGTTGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	3961616	3958869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565
ENSMUSG00000059734.8_3959004_3961619_1	chr19	-	518	5	NNC	ENSMUSG00000059734.8	novel	1005	7	NA	NA	869	-134	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGACAAGTGGGAGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	3961619	3959003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961570
ENSMUSG00000059734.8_3959004_3962734_1	chr19	-	603	7	FSM	ENSMUSG00000059734.8	ENSMUST00000237341.2	780	7	40	137	0	-134	multi-exon	FALSE	canonical	NA	NA	NA	NA	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGACAAGTGGGAGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	3962734	3959003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962709
ENSMUSG00000059734.8_3959152_3962488_1	chr19	-	527	6	ISM	ENSMUSG00000059734.8	ENSMUST00000235847.2	977	7	246	282	0	-282	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGGGCTGGGTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	3962488	3959151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962469
ENSMUSG00000059734.8_3960928_3962734_1	chr19	-	613	5	ISM	ENSMUSG00000059734.8	ENSMUST00000235847.2	977	7	0	2058	0	-2058	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGTGAGGCCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	3962734	3960927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962469
ENSMUSG00000059734.8_3961192_3962577_1	chr19	-	282	4	ISM	ENSMUSG00000059734.8	ENSMUST00000235847.2	977	7	157	2322	-89	-2322	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGATTCTGATGTGGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	3962577	3961191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_3961257_3961565_3961617_3961688_3961747_3962469
ENSMUSG00000059742.11_62594835_62618055_1	chr2	-	802	3	ISM	ENSMUSG00000059742.11	ENST00000621889.1	1867	6	89644	-37	89644	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCCTGTGCTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	62618055	62594834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62595115_62607625_62608026_62617933
ENSMUSG00000059742.11_62594877_62681048_1	chr2	-	1634	5	ISM	ENSMUSG00000059742.11	ENST00000621889.1	1867	6	26651	5	26651	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTACAGCTGTAGTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	62681048	62594876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62595115_62607625_62608026_62617933_62618360_62667409_62667625_62680693
ENSMUSG00000059742.11_62595048_62707631_1	chr2	-	1623	6	FSM	ENSMUSG00000059742.11	ENST00000621889.1	1867	6	68	176	68	-176	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTACCACATGCAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	62707631	62595047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_62595115_62607625_62608026_62617933_62618360_62667409_62667625_62680693_62681123_62707545
ENSMUSG00000059742.11_62618287_62707626_1	chr2	-	798	4	ISM	ENSMUSG00000059742.11	ENST00000621889.1	1867	6	73	23415	73	-1576	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACTACAGTCCTTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	62707626	62618286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62618360_62667409_62667625_62680693_62681123_62707545
ENSMUSG00000059742.11_62680864_63014514_1	chr2	-	815	4	ISM	ENSMUSG00000059742.11	ENSMUST00000112452.2	2849	6	0	64153	0	-64153	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAATGGGACCGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	63014514	62680863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_62681123_62707545_62707702_63012399_63012631_63014345
ENSMUSG00000059743.13_89000895_89008443_1	chr3	-	1355	10	ISM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	752	0	752	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	89008443	89000894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89008227
ENSMUSG00000059743.13_89000895_89008446_1	chr3	-	1352	10	NNC	ENSMUSG00000059743.13	novel	1382	11	NA	NA	749	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	89008446	89000894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002981_89006606_89006748_89007975_89008139_89008227
ENSMUSG00000059743.13_89000895_89008446_2	chr3	-	1352	10	NNC	ENSMUSG00000059743.13	novel	1382	11	NA	NA	749	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	89008446	89000894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_89001151_89001537_89001673_89001764_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89008227
ENSMUSG00000059743.13_89002671_89009198_1	chr3	-	528	5	ISM	ENSMUSG00000059743.13	ENSMUST00000081848.13	1237	10	68	1776	-3	-1776	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGCAGGTGCATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	89009198	89002670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89009168
ENSMUSG00000059791.15_36172230_36176294_1	chr17	+	1440	4	NNC	ENSMUSG00000059791.15	novel	1466	4	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2897	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTGTCTGTCCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	36172229	36176294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_36172404_36174330_36174528_36175003_36175181_36175402
ENSMUSG00000059791.15_36172378_36175495_1	chr17	+	322	3	FSM	ENSMUSG00000059791.15	ENST00000376420.9	983	3	103	558	103	-558	multi-exon	TRUE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGCTGCTGACTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	36172377	36175495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_36172410_36174330_36174528_36175402
ENSMUSG00000059796.17_69557762_69558601_1	chr11	-	763	2	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	4542	0	4542	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1004	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGCTTCTTGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	69558601	69557761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69558444_69558520
ENSMUSG00000059796.17_69558048_69559115_1	chr11	-	660	4	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	4028	286	4028	-286	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAACACTAATGCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	69559115	69558047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021
ENSMUSG00000059796.17_69558279_69559528_1	chr11	-	671	6	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	3615	-517	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGCCCAGGGTTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	69559528	69558278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_69558444_69558520_69558596_69558847_69558938_69559021_69559160_69559230_69559375_69559469
ENSMUSG00000059796.17_69558279_69559539_1	chr11	-	687	6	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	3604	517	3604	-517	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGCCCAGGGTTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	69559539	69558278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469
ENSMUSG00000059796.17_69558396_69559956_1	chr11	-	663	7	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	3187	634	3187	-634	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTGACCGAAGAAGACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	69559956	69558395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903
ENSMUSG00000059796.17_69558416_69560046_1	chr11	-	733	7	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	3097	654	3097	-654	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGTGTGGCTATTAACAT	NA	NA	NA	NA	NA	NA	NA	NA	69560046	69558415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903
ENSMUSG00000059796.17_69558891_69561031_1	chr11	-	681	6	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	2112	1129	2112	-1129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTCTGGCTCTAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	69561031	69558890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958
ENSMUSG00000059796.17_69559029_69561465_1	chr11	-	719	6	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	1678	1267	1678	-1267	internal_fragment	FALSE	canonical	NA	NA	NA	NA	733	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATGGTGAGTTTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	69561465	69559028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440
ENSMUSG00000059796.17_69559114_69561493_1	chr11	-	662	6	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	1650	1352	1650	-1352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCAGGCAGTCATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	69561493	69559113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440
ENSMUSG00000059796.17_69559140_69561573_1	chr11	-	716	6	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	1570	1378	1570	-1378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGACTTGTATGAGACGC	NA	NA	NA	NA	NA	NA	NA	NA	69561573	69559139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440
ENSMUSG00000059796.17_69559308_69563141_1	chr11	-	705	7	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	2	1546	2	-1546	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTCGGATTCTTGTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	69563141	69559307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ENSMUSG00000059811.14_80156848_80203480_1	chr17	-	2791	12	FSM	ENSMUSG00000059811.14	ENST00000406122.5	2889	12	0	98	0	-98	multi-exon	TRUE	canonical	NA	NA	NA	NA	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGTAGCTTTCATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	80203480	80156847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_80158223_80159949_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80203337
ENSMUSG00000059811.14_80158028_80164677_1	chr17	-	1029	6	ISM	ENSMUSG00000059811.14	ENST00000629272.2	1231	10	7544	-87	7544	87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCTGTATACATACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	80164677	80158027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_80158223_80159949_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536
ENSMUSG00000059811.14_80160334_80183279_1	chr17	-	938	11	ISM	ENSMUSG00000059811.14	ENST00000419554.6	2370	13	20189	2836	-11058	-2219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGATCTCAAGGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	80183279	80160333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230
ENSMUSG00000059811.14_80163637_80203480_1	chr17	-	1024	9	ISM	ENSMUSG00000059811.14	ENST00000419554.6	2370	13	-12	6139	0	-5522	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAAAATCTTGTTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	80203480	80163636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ENSMUSG00000059824.13_45354512_45357794_1	chr7	+	1197	3	ISM	ENSMUSG00000059824.13	ENSMUST00000080885.12	1837	4	0	1833	0	-1744	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTTGACCCTCGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	45354511	45357794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45355187_45356029_45356441_45357683
ENSMUSG00000059824.13_45354512_45357848_1	chr7	+	1251	3	ISM	ENSMUSG00000059824.13	ENSMUST00000080885.12	1837	4	0	1779	0	-1690	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATCATGAAGAAGGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	45354511	45357848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_45355187_45356029_45356441_45357683
ENSMUSG00000059824.13_45354708_45359166_1	chr7	+	1180	4	FSM	ENSMUSG00000059824.13	ENSMUST00000080885.12	1837	4	196	461	0	-372	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGATATCTGTGCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	45354707	45359166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_45355187_45356029_45356441_45357683_45357896_45359088
ENSMUSG00000059824.13_45355029_45359453_1	chr7	+	1146	4	FSM	ENSMUSG00000059824.13	ENSMUST00000080885.12	1837	4	517	174	321	-85	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTCCCCCACCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	45355028	45359453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_45355187_45356029_45356441_45357683_45357896_45359088
ENSMUSG00000059824.13_45355095_45359538_1	chr7	+	1165	4	FSM	ENSMUSG00000059824.13	ENSMUST00000080885.12	1837	4	583	89	387	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATCAACACAATCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	45355094	45359538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_45355187_45356029_45356441_45357683_45357896_45359088
ENSMUSG00000059834.13_41581377_41616152_1	chr3	-	1004	6	ISM	ENSMUSG00000059834.13	ENSMUST00000026866.15	3005	21	80797	222	56151	113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTGCCTTCATCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	41616152	41581376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_41581670_41583952_41584049_41586087_41586167_41601879_41602077_41611638_41611832_41616006
ENSMUSG00000059834.13_41581541_41665640_1	chr3	-	559	6	NNC	ENSMUSG00000059834.13	novel	755	7	NA	NA	6663	-51	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAGCCTGCTGAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	41665640	41581540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_41581665_41583952_41584049_41586087_41586167_41657820_41657892_41663903_41663970_41665517
ENSMUSG00000059834.13_41581541_41672245_1	chr3	-	646	7	FSM	ENSMUSG00000059834.13	ENST00000503215.5	755	7	58	51	58	-51	multi-exon	FALSE	canonical	NA	NA	NA	NA	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAGCCTGCTGAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	41672245	41581540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_41581670_41583952_41584049_41586087_41586167_41657820_41657892_41663903_41663970_41665517_41665641_41672163
ENSMUSG00000059834.13_41616063_41665610_1	chr3	-	927	10	ISM	ENSMUSG00000059834.13	ENSMUST00000026866.15	3005	21	31339	34908	6693	-34573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTTCAGCTAAGACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	41665610	41616062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_41616153_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41657820_41657892_41663903_41663970_41665517
ENSMUSG00000059851.16_4744849_4746109_1	chr7	+	406	3	ISM	ENSMUSG00000059851.16	ENST00000630497.1	1881	7	14	4385	14	-4385	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGGCAAGGCTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	4744848	4746109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_4744981_4745617_4745728_4745945
ENSMUSG00000059851.16_4744849_4750370_1	chr7	+	1909	8	ISM	ENSMUSG00000059851.16	ENSMUST00000108583.9	2177	9	1665	143	14	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGACCTCATCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4744848	4750370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ENSMUSG00000059851.16_4744849_4750513_1	chr7	+	2052	8	ISM	ENSMUSG00000059851.16	ENSMUST00000108583.9	2177	9	1665	0	14	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4744848	4750513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ENSMUSG00000059851.16_4744849_4750513_2	chr7	+	2047	7	NNC	ENSMUSG00000059851.16	novel	2189	9	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4744848	4750513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4748785_4748938_4749075_4749261_4749375
ENSMUSG00000059851.16_4749074_4749595_1	chr7	+	407	2	ISM	ENSMUSG00000059851.16	ENST00000630497.1	1881	7	4239	899	4239	-899	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGGCCATGGTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	4749073	4749595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_4749261_4749375
ENSMUSG00000059866.14_34653431_34656967_1	chr5	-	1120	3	ISM	ENSMUSG00000059866.14	ENSMUST00000030991.14	2022	7	14340	0	14315	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGAGCTGGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	34656967	34653430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34654295_34656523_34656644_34656831
ENSMUSG00000059866.14_34653474_34657040_1	chr5	-	1150	3	ISM	ENSMUSG00000059866.14	ENSMUST00000030991.14	2022	7	14267	43	14242	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATCATTTATTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	34657040	34653473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34654295_34656523_34656644_34656831
ENSMUSG00000059866.14_34653474_34657072_1	chr5	-	1182	3	ISM	ENSMUSG00000059866.14	ENSMUST00000030991.14	2022	7	14235	43	14210	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATCATTTATTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	34657072	34653473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34654295_34656523_34656644_34656831
ENSMUSG00000059866.14_34653595_34658313_1	chr5	-	1131	4	ISM	ENSMUSG00000059866.14	ENSMUST00000030991.14	2022	7	12994	164	12969	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCATTACAGTTACATGA	NA	NA	NA	NA	NA	NA	NA	NA	34658313	34653594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251
ENSMUSG00000059866.14_34653748_34660997_1	chr5	-	1123	5	ISM	ENSMUSG00000059866.14	ENSMUST00000087737.10	1987	6	10338	317	10285	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATCAGTTGTGGGAATA	NA	NA	NA	NA	NA	NA	NA	NA	34660997	34653747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880
ENSMUSG00000059866.14_34653889_34661126_1	chr5	-	1111	5	ISM	ENSMUSG00000059866.14	ENSMUST00000087737.10	1987	6	10209	458	10156	-415	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCATTTGACCATGG	NA	NA	NA	NA	NA	NA	NA	NA	34661126	34653888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880
ENSMUSG00000059866.14_34654120_34671193_1	chr5	-	1156	6	FSM	ENSMUSG00000059866.14	ENSMUST00000087737.10	1987	6	142	689	89	-646	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCTTCAGTGCCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	34671193	34654119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880_34661172_34670962
ENSMUSG00000059866.14_34654182_34671214_1	chr5	-	1115	6	FSM	ENSMUSG00000059866.14	ENSMUST00000087737.10	1987	6	121	751	68	-708	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCCAACAGATGGAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	34671214	34654181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880_34661172_34670962
ENSMUSG00000059866.14_34654230_34671282_1	chr5	-	1135	6	FSM	ENSMUSG00000059866.14	ENSMUST00000087737.10	1987	6	53	799	0	-756	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCACTGGAGCATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	34671282	34654229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880_34661172_34670962
ENSMUSG00000059883.17_94441553_94464746_1	chr15	+	1477	11	ISM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	29	1441	0	-1441	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGAAAAACAGACGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	94441552	94464746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_94441708_94445716_94445885_94449683_94449830_94451715_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94460898_94460962_94464619
ENSMUSG00000059883.17_94441654_94464950_1	chr15	+	1464	12	FSM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	130	1237	101	-1237	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTACTTCTCGAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	94441653	94464950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_94441708_94445716_94445885_94449683_94449830_94451715_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94460898_94460962_94464619_94464779_94464894
ENSMUSG00000059883.17_94445821_94465099_1	chr15	+	1455	11	ISM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	4297	1088	4268	-1088	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTAATAGACGAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	94445820	94465099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_94445885_94449683_94449830_94451715_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94460898_94460962_94464619_94464779_94464894
ENSMUSG00000059883.17_94449767_94465259_1	chr15	+	1468	10	ISM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	8243	928	8214	-928	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATTTGGGGCGGGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	94449766	94465259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_94449830_94451715_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94460898_94460962_94464619_94464779_94464894
ENSMUSG00000059883.17_94451811_94465404_1	chr15	+	1455	9	ISM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	10287	783	10258	-783	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGTAAAGCTTTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	94451810	94465404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94460898_94460962_94464619_94464779_94464894
ENSMUSG00000059883.17_94451874_94465460_1	chr15	+	1448	9	ISM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	10350	727	10321	-727	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTTGATAGGAACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	94451873	94465460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94460898_94460962_94464619_94464779_94464894
ENSMUSG00000059883.17_94452669_94465599_1	chr15	+	1460	8	ISM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	11145	588	11116	-588	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTATTGTGGTCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	94452668	94465599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94460898_94460962_94464619_94464779_94464894
ENSMUSG00000059883.17_94456222_94465827_1	chr15	+	1473	6	ISM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	14698	360	14669	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTCCCTTATGGTAGACA	NA	NA	NA	NA	NA	NA	NA	NA	94456221	94465827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_94456246_94456649_94456760_94459326_94459511_94460898_94460962_94464619_94464779_94464894
ENSMUSG00000059883.17_94456735_94465940_1	chr15	+	1477	5	ISM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	15211	247	15182	-247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAAGAAAGTTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	94456734	94465940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_94456760_94459326_94459511_94460898_94460962_94464619_94464779_94464894
ENSMUSG00000059883.17_94459467_94466076_1	chr15	+	1448	4	ISM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	17943	111	17914	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATCACTAAGACTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	94459466	94466076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_94459511_94460898_94460962_94464619_94464779_94464894
ENSMUSG00000059883.17_94460898_94466187_1	chr15	+	1516	3	ISM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	19374	0	19345	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	94460897	94466187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_94460962_94464619_94464779_94464894
ENSMUSG00000059890.17_44835838_44837181_1	chr9	-	1229	2	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	34257	1411	34257	1308	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAATGTGGCTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	44837181	44835837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44836994_44837108
ENSMUSG00000059890.17_44835990_44840987_1	chr9	-	1197	3	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	30451	1563	30451	1156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAGACATTAAAGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	44840987	44835989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44836994_44837108_44837274_44840959
ENSMUSG00000059890.17_44836032_44841059_1	chr9	-	1227	3	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	30379	1605	30379	1114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGAGCTGCTTCTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	44841059	44836031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44836994_44837108_44837274_44840959
ENSMUSG00000059890.17_44836151_44843712_1	chr9	-	1239	4	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	27726	1724	27726	995	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGTGTCTTCCCAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	44843712	44836150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44836994_44837108_44837274_44840959_44841118_44843639
ENSMUSG00000059890.17_44836307_44844638_1	chr9	-	1201	5	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	26800	1880	26800	839	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAAGGTCTAGGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	44844638	44836306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44836994_44837108_44837274_44840959_44841118_44843639_44843788_44844595
ENSMUSG00000059890.17_44836368_44844688_1	chr9	-	1190	5	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	26750	1941	26750	778	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTGGAACTTGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	44844688	44836367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44836994_44837108_44837274_44840959_44841118_44843639_44843788_44844595
ENSMUSG00000059890.17_44836495_44846676_1	chr9	-	1203	6	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	24762	2068	24762	651	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGATGAGGGAATCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	44846676	44836494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44836994_44837108_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624
ENSMUSG00000059890.17_44836545_44846736_1	chr9	-	1213	6	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	24702	2118	24702	601	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCAGATAAATGCAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	44846736	44836544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44836994_44837108_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624
ENSMUSG00000059890.17_44836746_44849164_1	chr9	-	1207	8	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	22274	2319	22274	400	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCATTTTTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	44849164	44836745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44836994_44837108_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146
ENSMUSG00000059890.17_44836853_44851277_1	chr9	-	1202	9	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	20161	2426	20161	293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTCACAGCATCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	44851277	44836852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44836994_44837108_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258
ENSMUSG00000059890.17_44836900_44851338_1	chr9	-	1216	9	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	20100	2473	20100	246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGATTCTTAAGACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	44851338	44836899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44836994_44837108_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258
ENSMUSG00000059890.17_44837146_44852502_1	chr9	-	1244	9	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	18936	2719	18936	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGAACTGCACATGCA	NA	NA	NA	NA	NA	NA	NA	NA	44852502	44837145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451
ENSMUSG00000059890.17_44841037_44853968_1	chr9	-	1226	9	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	17470	6610	17470	-3891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTGACCCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	44853968	44841036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863
ENSMUSG00000059890.17_44843717_44854120_1	chr9	-	1220	8	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	17318	9290	17318	-6571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCCGTGTCCTGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	44854120	44843716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863
ENSMUSG00000059890.17_44844722_44857522_1	chr9	-	1233	9	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	13916	10295	13916	-7576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTACTTCCTGCAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	44857522	44844721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481
ENSMUSG00000059890.17_44846711_44857661_1	chr9	-	1231	8	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	13777	12284	13777	-9565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGCAGATGTTTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	44857661	44846710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481
ENSMUSG00000059890.17_44849023_44857815_1	chr9	-	1204	7	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	13623	14596	13623	8330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTTAGAAGCTATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	44857815	44849022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481
ENSMUSG00000059890.17_44849184_44859385_1	chr9	-	1207	7	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	12053	14757	12053	8169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGGGGACAGATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	44859385	44849183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323
ENSMUSG00000059890.17_44851375_44860158_1	chr9	-	1236	7	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	11280	16948	11280	5978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGCCCCTTGGTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	44860158	44851374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079
ENSMUSG00000059890.17_44852452_44860282_1	chr9	-	1288	6	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	11156	18025	11156	4901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTGTGGGACACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	44860282	44852451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079
ENSMUSG00000059890.17_44853871_44861079_1	chr9	-	1197	6	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	10359	19444	10359	3482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGGTAAGCAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	44861079	44853870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030
ENSMUSG00000059890.17_44854065_44862178_1	chr9	-	1214	7	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	9260	19638	9260	3288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTTCGAACGCCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	44862178	44854064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078
ENSMUSG00000059890.17_44854130_44862216_1	chr9	-	1187	7	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	9222	19703	9222	3223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGCTGCAGGTTGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	44862216	44854129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078
ENSMUSG00000059890.17_44856132_44863355_1	chr9	-	1202	7	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	8083	21705	8083	1221	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATACCTTGTACTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	44863355	44856131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287
ENSMUSG00000059890.17_44857508_44864413_1	chr9	-	1303	7	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	7025	23081	7025	-155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAAAAGTGTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	44864413	44857507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239
ENSMUSG00000059890.17_44857711_44871378_1	chr9	-	1202	8	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	60	23284	60	-358	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAAATGCAGGCCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	44871378	44857710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864414_44871276
ENSMUSG00000059895.14_73596647_73628773_1	chr15	+	1302	5	FSM	ENSMUSG00000059895.14	ENST00000520105.5	1324	5	22	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTGTACCTCATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	73596646	73628773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_73596698_73622977_73623877_73625604_73625698_73627142_73627274_73628645
ENSMUSG00000059895.14_73622976_73628773_1	chr15	+	1249	4	NNC	ENSMUSG00000059895.14	novel	1324	5	NA	NA	-614	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTGTACCTCATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	73622975	73628773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_73623877_73625604_73625698_73627142_73627274_73628649
ENSMUSG00000059895.14_73623361_73627928_1	chr15	+	792	4	ISM	ENSMUSG00000059895.14	ENSMUST00000053232.8	3260	6	3138	2687	-229	-845	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCCATCCAGTTCATCCG	NA	NA	NA	NA	NA	NA	NA	NA	73623360	73627928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_73623877_73625604_73625698_73627142_73627274_73627876
ENSMUSG00000059895.14_73623693_73628773_1	chr15	+	351	3	NNC	ENSMUSG00000059895.14	novel	456	3	NA	NA	103	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTGTACCTCATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	73623692	73628773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_73623877_73627912_73627952_73628645
ENSMUSG00000059895.14_73623693_73628773_2	chr15	+	353	3	FSM	ENSMUSG00000059895.14	ENST00000524028.1	456	3	103	0	103	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTGTACCTCATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	73623692	73628773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_73623877_73627910_73627952_73628645
ENSMUSG00000059895.14_73623693_73628773_3	chr15	+	349	3	NNC	ENSMUSG00000059895.14	novel	456	3	NA	NA	103	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTGTACCTCATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	73623692	73628773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_73623877_73627910_73627952_73628649
ENSMUSG00000059895.14_73623790_73629076_1	chr15	+	817	5	ISM	ENSMUSG00000059895.14	ENSMUST00000053232.8	3260	6	3567	1539	200	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGTGAAGAGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	73623789	73629076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
ENSMUSG00000059900.15_115707396_115711047_1	chr6	-	351	5	ISM	ENSMUSG00000059900.15	ENST00000435218.6	385	6	7491	0	7491	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTGCCGCACGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	115711047	115707395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955
ENSMUSG00000059900.15_115707396_115711047_2	chr6	-	346	5	NNC	ENSMUSG00000059900.15	novel	385	6	NA	NA	7491	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1799	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTGCCGCACGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	115711047	115707395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_115707460_115707967_115708043_115708145_115708213_115710614_115710663_115710955
ENSMUSG00000059900.15_115707396_115718535_1	chr6	-	382	6	FSM	ENSMUSG00000059900.15	ENST00000435218.6	385	6	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTGCCGCACGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	115718535	115707395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115711045_115718501
ENSMUSG00000059923.14_115536569_115590136_1	chr11	-	592	4	FSM	ENSMUSG00000059923.14	ENST00000578961.5	675	4	83	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAAAGTTAAGACCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	115590136	115536568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115536781_115540596_115540720_115546183_115546282_115589977
ENSMUSG00000059923.14_115536569_115590136_2	chr11	-	587	4	NNC	ENSMUSG00000059923.14	novel	675	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAAAGTTAAGACCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	115590136	115536568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_115536781_115540601_115540720_115546183_115546282_115589977
ENSMUSG00000059981.13_126465215_126466275_1	chr7	-	980	2	ISM	ENSMUSG00000059981.13	ENST00000279394.7	4274	19	17171	366	17171	-365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGATGGGGCCATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	126466275	126465214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126466088_126466168
ENSMUSG00000059981.13_126465475_126467436_1	chr7	-	951	3	ISM	ENSMUSG00000059981.13	ENST00000279394.7	4274	19	16010	626	16010	-625	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACAGATGTTGGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	126467436	126465474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126466088_126466168_126466352_126467281
ENSMUSG00000059981.13_126465857_126471186_1	chr7	-	976	5	ISM	ENSMUSG00000059981.13	ENST00000279394.7	4274	19	12260	1008	12260	-1007	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGGCCCTCCTCCACC	NA	NA	NA	NA	NA	NA	NA	NA	126471186	126465856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126466088_126466168_126466352_126467281_126467495_126470573_126470814_126471077
ENSMUSG00000059981.13_126468901_126471570_1	chr7	-	1986	4	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	11965	8	11876	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCCCAGTCCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	126471570	126468900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126470241_126470573_126470814_126471077_126471282_126471368
ENSMUSG00000059981.13_126468951_126471630_1	chr7	-	1996	4	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	11905	58	11816	-58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGACAGGCAGCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	126471630	126468950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126470241_126470573_126470814_126471077_126471282_126471368
ENSMUSG00000059981.13_126469091_126473509_1	chr7	-	2000	5	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	10026	198	9937	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACCCAAATTTAGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	126473509	126469090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126470241_126470573_126470814_126471077_126471282_126471368_126471735_126473469
ENSMUSG00000059981.13_126469144_126473559_1	chr7	-	1997	5	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	9976	251	9887	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCTCAGACTCGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	126473559	126469143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126470241_126470573_126470814_126471077_126471282_126471368_126471735_126473469
ENSMUSG00000059981.13_126469294_126473916_1	chr7	-	2012	6	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	9619	401	9530	-401	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCCCCCTGGGCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	126473916	126469293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126470241_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820
ENSMUSG00000059981.13_126469364_126473993_1	chr7	-	2019	6	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	9542	471	9453	-471	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGAGTTTGGGCTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	126473993	126469363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126470241_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820
ENSMUSG00000059981.13_126469554_126474316_1	chr7	-	2011	7	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	9219	661	9130	-661	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGAGGATTTTGCTACG	NA	NA	NA	NA	NA	NA	NA	NA	126474316	126469553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126470241_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474088_126474228
ENSMUSG00000059981.13_126470061_126478457_1	chr7	-	2061	12	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	5078	1168	4989	-1168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGGAGATGGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	126478457	126470060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126470241_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474088_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362
ENSMUSG00000059981.13_126470331_126471145_1	chr7	-	551	2	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	12390	1438	12301	-1438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAAAAACATAGGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	126471145	126470330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126470814_126471077
ENSMUSG00000059981.13_126470574_126479327_1	chr7	-	2033	13	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	4208	1681	4119	-1681	internal_fragment	TRUE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGTGCAGGCCAGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	126479327	126470573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474088_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223
ENSMUSG00000059981.13_126470750_126479740_1	chr7	-	1999	15	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	3795	1857	3706	-1857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCCGAGAGCTGGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	126479740	126470749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474088_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668
ENSMUSG00000059981.13_126470777_126479815_1	chr7	-	2047	15	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	3720	1884	3631	-1884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTGCTGTTACGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	126479815	126470776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474088_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668
ENSMUSG00000059981.13_126471132_126483134_1	chr7	-	2033	15	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	401	2239	312	-2239	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGCAAGATGCTACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	126483134	126471131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126471282_126471368_126471735_126473469_126473629_126473820_126474088_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ENSMUSG00000059981.13_126471211_126483187_1	chr7	-	2007	15	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	348	2318	259	-2318	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACAGTGCCAGGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	126483187	126471210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126471282_126471368_126471735_126473469_126473629_126473820_126474088_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ENSMUSG00000059981.13_126471537_126483397_1	chr7	-	1978	14	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	138	2644	49	-2644	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGCCCGGAGGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	126483397	126471536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126471735_126473469_126473629_126473820_126474088_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ENSMUSG00000059981.13_126471603_126483483_1	chr7	-	1998	14	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	52	2710	-37	-2710	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCACAGTGGGCGGTTACA	NA	NA	NA	NA	NA	NA	NA	NA	126483483	126471602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126471735_126473469_126473629_126473820_126474088_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ENSMUSG00000059981.13_126479788_126483579_1	chr7	-	550	2	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	-44	10895	-44	-10895	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGCCGGGAGCCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	126483579	126479787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126479836_126483077
ENSMUSG00000060002.15_88306199_88325590_1	chr10	-	3551	8	ISM	ENSMUSG00000060002.15	ENSMUST00000117440.8	4863	9	14345	823	14190	-823	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACAGAAATAACTTATAG	NA	NA	NA	NA	NA	NA	NA	NA	88325590	88306198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88308847_88311287_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442
ENSMUSG00000060002.15_88309958_88318158_1	chr10	-	1924	5	ISM	ENSMUSG00000060002.15	ENSMUST00000020253.15	3898	8	21674	1279	21622	-1279	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAGGTGGGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	88318158	88309957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092
ENSMUSG00000060002.15_88310204_88325590_1	chr10	-	1987	7	ISM	ENSMUSG00000060002.15	ENSMUST00000020253.15	3898	8	14242	1525	14190	-1525	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGTATTTATGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	88325590	88310203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442
ENSMUSG00000060002.15_88310466_88339615_1	chr10	-	1894	8	FSM	ENSMUSG00000060002.15	ENSMUST00000020253.15	3898	8	217	1787	165	-1787	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTATCTTTTCTATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	88339615	88310465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ENSMUSG00000060036.15_79961992_79965888_1	chr15	-	979	8	ISM	ENSMUSG00000060036.15	ENSMUST00000081650.15	1351	10	1719	0	1719	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTCCCACATTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	79965888	79961991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815
ENSMUSG00000060036.15_79961992_79965888_2	chr15	-	974	8	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1719	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	27782	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTCCCACATTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	79965888	79961991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_79962096_79962187_79962308_79962536_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815
ENSMUSG00000060036.15_79961992_79965984_1	chr15	-	1075	8	ISM	ENSMUSG00000060036.15	ENSMUST00000081650.15	1351	10	1623	0	1623	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTCCCACATTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	79965984	79961991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815
ENSMUSG00000060036.15_79962275_79966681_1	chr15	-	975	8	ISM	ENSMUSG00000060036.15	ENSMUST00000081650.15	1351	10	926	283	926	-283	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27588	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGATTGACCTGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	79966681	79962274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590
ENSMUSG00000060036.15_79962588_79966784_1	chr15	-	989	7	ISM	ENSMUSG00000060036.15	ENSMUST00000081650.15	1351	10	823	596	823	-596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGCTCAAAGGCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	79966784	79962587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590
ENSMUSG00000060036.15_79962907_79967580_1	chr15	-	1005	7	ISM	ENSMUSG00000060036.15	ENSMUST00000081650.15	1351	10	27	915	27	-915	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24598	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGGGGGCTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	79967580	79962906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
ENSMUSG00000060038.15_85798435_85801096_1	chr8	+	900	7	ISM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	49	695	49	-670	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACCACATTGCCAACGCT	NA	NA	NA	NA	NA	NA	NA	NA	85798434	85801096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021
ENSMUSG00000060038.15_85798564_85801385_1	chr8	+	823	8	ISM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	178	406	53	-381	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATCAACACAGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	85798563	85801385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362
ENSMUSG00000060038.15_85798622_85801429_1	chr8	+	809	8	ISM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	236	362	111	-337	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGCCAGATGAGGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	85798621	85801429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362
ENSMUSG00000060038.15_85798662_85801488_1	chr8	+	828	8	ISM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	276	303	151	-278	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATGGTGGCAGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	85798661	85801488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362
ENSMUSG00000060038.15_85799086_85801598_1	chr8	+	838	8	ISM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	700	193	575	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTGAGACATTCGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	85799085	85801598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
ENSMUSG00000060038.15_85799139_85801647_1	chr8	+	834	8	ISM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	753	144	628	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGACTAAGAAGATTGG	NA	NA	NA	NA	NA	NA	NA	NA	85799138	85801647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
ENSMUSG00000060038.15_85799172_85801635_1	chr8	+	648	7	ISM	ENSMUSG00000060038.15	ENST00000351660.9	1042	8	661	131	661	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCTGAGAAGAATGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	85799171	85801635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801399_85801489_85801562
ENSMUSG00000060038.15_85799204_85801780_1	chr8	+	902	8	ISM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	818	11	693	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAGTCAGTCTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	85799203	85801780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
ENSMUSG00000060073.10_71021395_71042164_1	chr12	+	1889	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	0	957	0	885	multi-exon	FALSE	canonical	NA	NA	NA	NA	1804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCACCTGTCTTAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	71021394	71042164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060073.10_71025506_71042299_1	chr12	+	1878	10	ISM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	4111	822	4049	-822	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAACAGGTCAGAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	71025505	71042299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060073.10_71031266_71042497_1	chr12	+	1869	8	ISM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	9871	624	9809	-624	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCCCTAACTAAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	71031265	71042497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060073.10_71033666_71042660_1	chr12	+	1826	6	ISM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	12271	461	12209	-461	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCCTTTGTTTCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	71033665	71042660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060073.10_71037290_71042842_1	chr12	+	1867	4	ISM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	15895	279	15833	-279	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAGTTGGATTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	71037289	71042842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060073.10_71040314_71042989_1	chr12	+	1896	2	ISM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	18919	132	18857	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTCTGTTGAAATGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	71040313	71042989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_71040345_71041124
ENSMUSG00000060090.17_20230798_20266279_1	chrX	+	3526	5	FSM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	78	813	0	-813	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTCTGTATATTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	20230797	20266279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890
ENSMUSG00000060090.17_20243460_20266909_1	chrX	+	3546	4	ISM	ENSMUSG00000060090.17	ENSMUST00000115387.8	4498	6	12662	183	12662	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTTGTCCTCCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	20243459	20266909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_20243786_20247943_20248059_20263459_20263546_20263890
ENSMUSG00000060098.12_106937655_106963526_1	chr8	+	766	7	ISM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	87	15900	0	1505	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGAGTCTAGGCGAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	106937654	106963526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425
ENSMUSG00000060098.12_106937669_106963594_1	chr8	+	820	7	ISM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	101	15832	14	1573	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGACATTCAGCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	106937668	106963594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425
ENSMUSG00000060098.12_106939158_106963926_1	chr8	+	770	7	ISM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	1590	15500	83	1905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCACAGGTGGTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	106939157	106963926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853
ENSMUSG00000060098.12_106939158_106967945_1	chr8	+	856	7	ISM	ENSMUSG00000060098.12	ENST00000449359.7	1992	16	83	10361	83	5924	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGCCTGCTTGTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	106939157	106967945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106939204_106943875_106943913_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817
ENSMUSG00000060098.12_106943874_106964034_1	chr8	+	834	6	ISM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	6306	15392	4799	2013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGGCAGGAGCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	106943873	106964034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853
ENSMUSG00000060098.12_106946571_106967836_1	chr8	+	795	6	ISM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	9003	11590	7496	5815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTACTTCCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	106946570	106967836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817
ENSMUSG00000060098.12_106946684_106967940_1	chr8	+	786	6	ISM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	9116	11486	7609	5919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGTATGCCTGCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	106946683	106967940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817
ENSMUSG00000060098.12_106953894_106968798_1	chr8	+	778	6	ISM	ENSMUSG00000060098.12	ENST00000449359.7	1992	16	14819	9508	14819	6777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTCTGGAACCGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	106953893	106968798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742
ENSMUSG00000060098.12_106961477_106969942_1	chr8	+	819	6	ISM	ENSMUSG00000060098.12	ENST00000449359.7	1992	16	22402	8364	22402	7921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCTGCCTTTGTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	106961476	106969942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926
ENSMUSG00000060098.12_106963424_106970481_1	chr8	+	821	6	ISM	ENSMUSG00000060098.12	ENST00000449359.7	1992	16	24349	7825	24349	-7825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGACAATTGTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	106963423	106970481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433
ENSMUSG00000060098.12_106963557_106973707_1	chr8	+	791	8	ISM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	25989	5719	24482	-4599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGAACCCTTTTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	106963556	106973707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694
ENSMUSG00000060098.12_106963618_106973755_1	chr8	+	778	8	ISM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	26050	5671	24543	-4551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGGTATGTCCGTACC	NA	NA	NA	NA	NA	NA	NA	NA	106963617	106973755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694
ENSMUSG00000060098.12_106963948_106975017_1	chr8	+	772	8	ISM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	26380	4409	24873	-3289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTTTGATGTGCACATC	NA	NA	NA	NA	NA	NA	NA	NA	106963947	106975017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980
ENSMUSG00000060098.12_106963981_106976954_1	chr8	+	792	9	ISM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	26413	2472	24906	-1352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAGAGAGCAGAGAGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	106963980	106976954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939
ENSMUSG00000060098.12_106967844_106977028_1	chr8	+	786	8	ISM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	30276	2398	28769	-1278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTTTTGATTTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	106967843	106977028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939
ENSMUSG00000060098.12_106968740_106977925_1	chr8	+	856	8	ISM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	31172	1501	29665	-381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGCCCATGGGCACGAAG	NA	NA	NA	NA	NA	NA	NA	NA	106968739	106977925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828
ENSMUSG00000060098.12_106968831_106978127_1	chr8	+	782	9	ISM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	31263	1299	29756	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCACTGCAAGCAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	106968830	106978127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ENSMUSG00000060098.12_106970431_106978307_1	chr8	+	833	7	ISM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	32863	1119	31356	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCTGCAGACTCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	106970430	106978307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ENSMUSG00000060098.12_106974993_106978576_1	chr8	+	787	4	ISM	ENSMUSG00000060098.12	ENST00000449359.7	1992	16	35918	-270	35918	270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCTACCTGGCCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	106974992	106978576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106975056_106976939_106977101_106977828_106977926_106978110
ENSMUSG00000060098.12_106977011_106978719_1	chr8	+	796	3	ISM	ENSMUSG00000060098.12	ENST00000449359.7	1992	16	37936	-413	37936	413	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCGTAAACATTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	106977010	106978719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106977101_106977828_106977926_106978110
ENSMUSG00000060098.12_106977070_106978764_1	chr8	+	782	3	ISM	ENSMUSG00000060098.12	ENST00000449359.7	1992	16	37995	-458	37995	458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGATTGCTAAGCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	106977069	106978764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_106977101_106977828_106977926_106978110
ENSMUSG00000060121.16_59060179_59075256_1	chr12	+	1587	10	NNC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTAGTTTAATTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	59060178	59075256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_59060395_59060755_59060841_59063651_59063746_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ENSMUSG00000060121.16_59060179_59075256_2	chr12	+	1583	10	NNC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTAGTTTAATTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	59060178	59075256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071793_59071900_59073640_59073700_59074522
ENSMUSG00000060121.16_59060179_59075256_3	chr12	+	1579	10	NNC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTAGTTTAATTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	59060178	59075256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_59060400_59060755_59060841_59063651_59063733_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ENSMUSG00000060121.16_59063652_59074564_1	chr12	+	531	7	NIC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	3393	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTTACCTCCTAGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	59063651	59074564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr12_+_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59074522
ENSMUSG00000060126.15_76082795_76083833_1	chr14	+	367	3	ISM	ENSMUSG00000060126.15	ENSMUST00000110894.9	1169	6	262	2022	-1	-1779	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGACATAAACACCCC	NA	NA	NA	NA	NA	NA	NA	NA	76082794	76083833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_76082897_76083056_76083131_76083642
ENSMUSG00000060126.15_76082795_76085615_1	chr14	+	827	5	FSM	ENSMUSG00000060126.15	ENST00000379055.5	823	5	-1	-3	-1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	6074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGACTGATGTCATCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	76082794	76085615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538
ENSMUSG00000060126.15_76083625_76084764_1	chr14	+	396	3	ISM	ENSMUSG00000060126.15	ENST00000379055.5	823	5	829	848	784	-848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTTAAGGATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	76083624	76084764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_76083834_76084133_76084240_76084683
ENSMUSG00000060126.15_76084185_76085737_1	chr14	+	371	3	ISM	ENSMUSG00000060126.15	ENST00000379060.8	727	6	1344	-20	1344	20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGAACTCTTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	76084184	76085737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_76084240_76084683_76084801_76085538
ENSMUSG00000060126.15_76084218_76085762_1	chr14	+	363	3	ISM	ENSMUSG00000060126.15	ENST00000379060.8	727	6	1377	-45	1377	45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGACCCTGTAGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	76084217	76085762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_76084240_76084683_76084801_76085538
ENSMUSG00000060131.12_126164686_126203730_1	chr2	-	1389	8	ISM	ENSMUSG00000060131.12	ENST00000284509.11	3603	26	118877	7	118877	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGAGCTTAGGCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	126203730	126164685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126165012_126167194_126167326_126172781_126172921_126179296_126179543_126184874_126184959_126199935_126200160_126200687_126200872_126203675
ENSMUSG00000060131.12_126164803_126214108_1	chr2	-	1389	9	ISM	ENSMUSG00000060131.12	ENST00000284509.11	3603	26	108499	124	108499	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGAAAATTTATGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	126214108	126164802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126165012_126167194_126167326_126172781_126172921_126179296_126179543_126184874_126184959_126199935_126200160_126200687_126200872_126203675_126203824_126214084
ENSMUSG00000060131.12_126164877_126214140_1	chr2	-	1347	9	ISM	ENSMUSG00000060131.12	ENST00000284509.11	3603	26	108467	198	108467	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAATATGCGAGCGAA	NA	NA	NA	NA	NA	NA	NA	NA	126214140	126164876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126165012_126167194_126167326_126172781_126172921_126179296_126179543_126184874_126184959_126199935_126200160_126200687_126200872_126203675_126203824_126214084
ENSMUSG00000060131.12_126164988_126216469_1	chr2	-	1352	10	ISM	ENSMUSG00000060131.12	ENST00000284509.11	3603	26	106138	309	106138	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAAGAAAAGACCCCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	126216469	126164987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126165012_126167194_126167326_126172781_126172921_126179296_126179543_126184874_126184959_126199935_126200160_126200687_126200872_126203675_126203824_126214084_126214191_126216403
ENSMUSG00000060131.12_126167269_126217658_1	chr2	-	1373	10	ISM	ENSMUSG00000060131.12	ENST00000284509.11	3603	26	104949	2590	104949	-2590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGACGTCAGTCATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	126217658	126167268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126167326_126172781_126172921_126179296_126179543_126184874_126184959_126199935_126200160_126200687_126200872_126203675_126203824_126214084_126214191_126216403_126216516_126217585
ENSMUSG00000060131.12_126172885_126220677_1	chr2	-	1350	10	ISM	ENSMUSG00000060131.12	ENST00000284509.11	3603	26	101930	8206	101930	-8206	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTCTTCATCTGGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	126220677	126172884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126172921_126179296_126179543_126184874_126184959_126199935_126200160_126200687_126200872_126203675_126203824_126214084_126214191_126216403_126216516_126217585_126217751_126220632
ENSMUSG00000060131.12_126179400_126225659_1	chr2	-	1361	10	ISM	ENSMUSG00000060131.12	ENST00000284509.11	3603	26	96948	14721	96948	-14721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTTACAATGTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	126225659	126179399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126179543_126184874_126184959_126199935_126200160_126200687_126200872_126203675_126203824_126214084_126214191_126216403_126216516_126217585_126217751_126220632_126220749_126225580
ENSMUSG00000060131.12_126179463_126225715_1	chr2	-	1354	10	ISM	ENSMUSG00000060131.12	ENST00000284509.11	3603	26	96892	14784	96892	-14784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCATCTGTGTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	126225715	126179462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126179543_126184874_126184959_126199935_126200160_126200687_126200872_126203675_126203824_126214084_126214191_126216403_126216516_126217585_126217751_126220632_126220749_126225580
ENSMUSG00000060131.12_126179515_126225769_1	chr2	-	1356	10	ISM	ENSMUSG00000060131.12	ENST00000284509.11	3603	26	96838	14836	96838	-14836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTCAGCTCTACGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	126225769	126179514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126179543_126184874_126184959_126199935_126200160_126200687_126200872_126203675_126203824_126214084_126214191_126216403_126216516_126217585_126217751_126220632_126220749_126225580
ENSMUSG00000060131.12_126200058_126239571_1	chr2	-	1399	11	ISM	ENSMUSG00000060131.12	ENSMUST00000040149.13	3986	28	93922	35602	83036	-35379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCATGGAAGGTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	126239571	126200057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126200160_126200687_126200872_126203675_126203824_126214084_126214191_126216403_126216516_126217585_126217751_126220632_126220749_126225580_126225770_126231160_126231327_126234721_126234769_126239507
ENSMUSG00000060131.12_126203797_126245307_1	chr2	-	1334	10	ISM	ENSMUSG00000060131.12	ENSMUST00000040149.13	3986	28	88186	39341	77300	-39118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACGAGTTTTTCCAATG	NA	NA	NA	NA	NA	NA	NA	NA	126245307	126203796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126203824_126214084_126214191_126216403_126216516_126217585_126217751_126220632_126220749_126225580_126225770_126231160_126231327_126234721_126234769_126239507_126239717_126245110
ENSMUSG00000060131.12_126214123_126247316_1	chr2	-	1358	10	ISM	ENSMUSG00000060131.12	ENSMUST00000040149.13	3986	28	86177	49667	75291	-49444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGGAACACGGCTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	126247316	126214122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126214191_126216403_126216516_126217585_126217751_126220632_126220749_126225580_126225770_126231160_126231327_126234721_126234769_126239507_126239717_126245110_126245308_126247227
ENSMUSG00000060131.12_126216446_126256324_1	chr2	-	1366	10	ISM	ENSMUSG00000060131.12	ENSMUST00000040149.13	3986	28	77169	51990	66283	-51767	internal_fragment	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCAATATTAAGATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	126256324	126216445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126216516_126217585_126217751_126220632_126220749_126225580_126225770_126231160_126231327_126234721_126234769_126239507_126239717_126245110_126245308_126247227_126247317_126256206
ENSMUSG00000060131.12_126220714_126300195_1	chr2	-	1351	12	ISM	ENSMUSG00000060131.12	ENSMUST00000040149.13	3986	28	33298	56258	22412	-56035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGGCAGATACTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	126300195	126220713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126220749_126225580_126225770_126231160_126231327_126234721_126234769_126239507_126239717_126245110_126245308_126247227_126247317_126256206_126256366_126266067_126266151_126269276_126269348_126275792_126275866_126300162
ENSMUSG00000060131.12_126225630_126301623_1	chr2	-	1364	12	ISM	ENSMUSG00000060131.12	ENSMUST00000040149.13	3986	28	31870	61174	20984	-60951	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCTTTTTGGATTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	126301623	126225629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_126225770_126231160_126231327_126234721_126234769_126239507_126239717_126245110_126245308_126247227_126247317_126256206_126256366_126266067_126266151_126269276_126269348_126275792_126275866_126300162_126300225_126301555
ENSMUSG00000060147.16_34102021_34119938_1	chr13	-	1352	8	FSM	ENSMUSG00000060147.16	ENSMUST00000017188.14	1504	8	41	111	41	-111	multi-exon	FALSE	canonical	NA	NA	NA	NA	2943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTATTCCTGTCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	34119938	34102020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119609_34119778_34119904
ENSMUSG00000060147.16_34102390_34106968_1	chr13	-	252	3	ISM	ENSMUSG00000060147.16	ENSMUST00000017188.14	1504	8	13011	480	13011	-480	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAAGGCTGGACAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	34106968	34102389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_34102426_34102723_34102880_34106908
ENSMUSG00000060147.16_34102773_34107053_1	chr13	-	252	2	ISM	ENSMUSG00000060147.16	ENSMUST00000017188.14	1504	8	12926	863	12926	-863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAACATGATCATCATGC	NA	NA	NA	NA	NA	NA	NA	NA	34107053	34102772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_34102880_34106908
ENSMUSG00000060147.16_34107002_34114058_1	chr13	-	219	3	ISM	ENSMUSG00000060147.16	ENSMUST00000017188.14	1504	8	5921	5092	5921	-5092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCCTTGTGAATGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	34114058	34107001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_34107052_34109294_34109413_34114007
ENSMUSG00000060147.16_34107002_34119635_1	chr13	-	576	5	ISM	ENSMUSG00000060147.16	ENSMUST00000167163.8	1654	8	431	5101	344	-5092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCCTTGTGAATGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	34119635	34107001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119555
ENSMUSG00000060147.16_34114121_34115630_1	chr13	-	216	2	ISM	ENSMUSG00000060147.16	ENSMUST00000017188.14	1504	8	4349	12211	4349	-12211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCACCAGGGCTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	34115630	34114120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_34114161_34115454
ENSMUSG00000060147.16_34114121_34119960_1	chr13	-	271	3	ISM	ENSMUSG00000060147.16	ENSMUST00000043552.17	1547	7	221	12220	19	-12211	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCACCAGGGCTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	34119960	34114120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_34114161_34115454_34115630_34119904
ENSMUSG00000060147.16_34115454_34119960_1	chr13	-	232	2	ISM	ENSMUSG00000060147.16	ENSMUST00000043552.17	1547	7	221	13553	19	-13544	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGACCCATTTCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	34119960	34115453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_34115630_34119904
ENSMUSG00000060147.16_34115566_34120066_1	chr13	-	226	2	ISM	ENSMUSG00000060147.16	ENSMUST00000043552.17	1547	7	115	13665	0	-13656	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGTGAAGACAGCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	34120066	34115565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_34115630_34119904
ENSMUSG00000060166.7_18039260_18042213_1	chr16	-	441	2	ISM	ENSMUSG00000060166.7	ENST00000405930.3	2763	11	10661	337	10661	-337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGATCCCTACCCCGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	18042213	18039259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18039569_18042081
ENSMUSG00000060166.7_18039382_18042265_1	chr16	-	371	2	ISM	ENSMUSG00000060166.7	ENST00000405930.3	2763	11	10609	459	10609	-459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCAGCCTCTCAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	18042265	18039381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18039569_18042081
ENSMUSG00000060166.7_18039482_18042421_1	chr16	-	427	2	ISM	ENSMUSG00000060166.7	ENST00000405930.3	2763	11	10453	559	10453	-559	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGAGGATCACCCGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	18042421	18039481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18039569_18042081
ENSMUSG00000060166.7_18042955_18044981_1	chr16	-	421	4	ISM	ENSMUSG00000060166.7	ENST00000405930.3	2763	11	7893	4032	7893	-4032	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACCCCTCAACACCACTG	NA	NA	NA	NA	NA	NA	NA	NA	18044981	18042954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18043080_18044322_18044433_18044509_18044631_18044916
ENSMUSG00000060166.7_18043031_18045260_1	chr16	-	458	5	ISM	ENSMUSG00000060166.7	ENST00000405930.3	2763	11	7614	4108	7614	-4108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTTGTGTCTGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	18045260	18043030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218
ENSMUSG00000060166.7_18044371_18045687_1	chr16	-	459	5	ISM	ENSMUSG00000060166.7	ENST00000405930.3	2763	11	7187	5448	7187	-5448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTCCACTGGTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	18045687	18044370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639
ENSMUSG00000060166.7_18044579_18045981_1	chr16	-	442	5	ISM	ENSMUSG00000060166.7	ENST00000405930.3	2763	11	6893	5656	6893	-5656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGCCCCCCAAGATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	18045981	18044578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922
ENSMUSG00000060166.7_18045029_18046227_1	chr16	-	442	5	ISM	ENSMUSG00000060166.7	ENST00000405930.3	2763	11	6647	6106	6647	-6106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCTCTCAGTGAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	18046227	18045028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046177
ENSMUSG00000060166.7_18045684_18046537_1	chr16	-	429	4	ISM	ENSMUSG00000060166.7	ENST00000405930.3	2763	11	6337	6761	6337	-6761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACGTGGTACTGGTCACG	NA	NA	NA	NA	NA	NA	NA	NA	18046537	18045683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18045743_18045922_18046096_18046177_18046336_18046498
ENSMUSG00000060166.7_18045926_18052815_1	chr16	-	495	4	ISM	ENSMUSG00000060166.7	ENST00000405930.3	2763	11	59	7003	59	-7003	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTATCCTTGTCTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	18052815	18045925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18046096_18046177_18046336_18046498_18046621_18052770
ENSMUSG00000060166.7_18046013_18052838_1	chr16	-	431	4	ISM	ENSMUSG00000060166.7	ENST00000405930.3	2763	11	36	7090	36	-7090	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGCGCACATGGTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	18052838	18046012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18046096_18046177_18046336_18046498_18046621_18052770
ENSMUSG00000060176.5_58438885_58468134_1	chr13	-	943	5	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	34628	-4	34542	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCGCCCAAGGAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	58468134	58438884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58439004_58440857_58441057_58442697_58442905_58451176_58451393_58467932
ENSMUSG00000060176.5_58440873_58471701_1	chr13	-	865	5	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	31061	1984	30975	-1984	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGCATTTCAAAGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	58471701	58440872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58441057_58442697_58442905_58451176_58451393_58467932_58468131_58471641
ENSMUSG00000060176.5_58440907_58471773_1	chr13	-	903	5	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	30989	2018	30903	-2018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGGAGCATGAGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	58471773	58440906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58441057_58442697_58442905_58451176_58451393_58467932_58468131_58471641
ENSMUSG00000060176.5_58440969_58471813_1	chr13	-	881	5	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	30949	2080	30863	-2080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTTGGAATCTGCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	58471813	58440968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58441057_58442697_58442905_58451176_58451393_58467932_58468131_58471641
ENSMUSG00000060176.5_58442847_58475767_1	chr13	-	864	6	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	26995	3958	26909	-3958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCAAGAACGAAAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	58475767	58442846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58442905_58451176_58451393_58467932_58468131_58471641_58471848_58473756_58473913_58475737
ENSMUSG00000060176.5_58451203_58476711_1	chr13	-	896	6	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	26051	12314	25965	-12314	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGGGCGAGTGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	58476711	58451202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58451393_58467932_58468131_58471641_58471848_58473756_58473913_58475737_58475842_58476669
ENSMUSG00000060176.5_58451274_58476750_1	chr13	-	864	6	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	26012	12385	25926	-12385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTCCAAGCGCTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	58476750	58451273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58451393_58467932_58468131_58471641_58471848_58473756_58473913_58475737_58475842_58476669
ENSMUSG00000060176.5_58451324_58476803_1	chr13	-	867	6	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	25959	12435	25873	-12435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGCAGCTTGAGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	58476803	58451323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58451393_58467932_58468131_58471641_58471848_58473756_58473913_58475737_58475842_58476669
ENSMUSG00000060176.5_58468056_58478896_1	chr13	-	875	6	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	23866	29167	23780	-29167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGCACAATGTGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	58478896	58468055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58468131_58471641_58471848_58473756_58473913_58475737_58475842_58476669_58476840_58478732
ENSMUSG00000060176.5_58471648_58485383_1	chr13	-	864	6	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	17379	32759	17293	-32759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCAGGTAACTTACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	58485383	58471647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58471848_58473756_58473913_58475737_58475842_58476669_58476840_58478732_58478940_58485356
ENSMUSG00000060176.5_58471695_58485437_1	chr13	-	871	6	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	17325	32806	17239	-32806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTACAGAAAGAGTTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	58485437	58471694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58471848_58473756_58473913_58475737_58475842_58476669_58476840_58478732_58478940_58485356
ENSMUSG00000060176.5_58471801_58491719_1	chr13	-	868	7	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	11043	32912	10957	-32912	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGGAGCATGAAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	58491719	58471800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58471848_58473756_58473913_58475737_58475842_58476669_58476840_58478732_58478940_58485356_58485501_58491679
ENSMUSG00000060176.5_58473802_58491845_1	chr13	-	902	6	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	10917	34913	10831	-34913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATCAGGATGAAAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	58491845	58473801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58473913_58475737_58475842_58476669_58476840_58478732_58478940_58485356_58485501_58491679
ENSMUSG00000060176.5_58475816_58492017_1	chr13	-	885	5	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	10745	36927	10659	-36927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGGCTCTGTTTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	58492017	58475815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58475842_58476669_58476840_58478732_58478940_58485356_58485501_58491679
ENSMUSG00000060176.5_58476806_58492154_1	chr13	-	860	4	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	10608	37917	10522	-37917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTCGCTGGGTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	58492154	58476805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58476840_58478732_58478940_58485356_58485501_58491679
ENSMUSG00000060176.5_58478731_58492268_1	chr13	-	942	3	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	10494	39842	10408	-39842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAAGCACTGGCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	58492268	58478730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58478940_58485356_58485501_58491679
ENSMUSG00000060176.5_58485357_58492398_1	chr13	-	863	2	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	10364	46468	10278	-46468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCTCAGTGCTCGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	58492398	58485356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58485501_58491679
ENSMUSG00000060176.5_58485409_58492448_1	chr13	-	861	2	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	10314	46520	10228	-46520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGGGCATGCCGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	58492448	58485408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58485501_58491679
ENSMUSG00000060176.5_58485460_58492503_1	chr13	-	865	2	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	10259	46571	10173	-46571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAGCTGGAGGAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	58492503	58485459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58485501_58491679
ENSMUSG00000060176.5_58491821_58493516_1	chr13	-	892	2	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	9246	52932	9160	-52932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGTGGTTTAGCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	58493516	58491820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58492639_58493442
ENSMUSG00000060176.5_58491924_58493630_1	chr13	-	903	2	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	9132	53035	9046	-53035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGAATGTCTGGGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	58493630	58491923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58492639_58493442
ENSMUSG00000060176.5_58492087_58502486_1	chr13	-	861	3	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	276	53198	190	-53198	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGCAGACCGAATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	58502486	58492086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58492639_58493442_58493644_58502378
ENSMUSG00000060176.5_58492194_58502676_1	chr13	-	944	3	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	86	53305	0	-53305	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTGTCAGCCCGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	58502676	58492193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_58492639_58493442_58493644_58502378
ENSMUSG00000060216.16_70327036_70329548_1	chr11	+	711	8	ISM	ENSMUSG00000060216.16	ENST00000381488.10	1182	13	670	1550	670	-1550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGCCTTGCCTTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	70327035	70329548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70327050_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473
ENSMUSG00000060216.16_70327525_70330381_1	chr11	+	706	8	ISM	ENSMUSG00000060216.16	ENST00000381488.10	1182	13	1159	717	1159	-717	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACAGCGTGGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	70327524	70330381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297
ENSMUSG00000060216.16_70327729_70330567_1	chr11	+	693	8	ISM	ENSMUSG00000060216.16	ENST00000381488.10	1182	13	1363	531	1363	-531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGCCACCCACACGCT	NA	NA	NA	NA	NA	NA	NA	NA	70327728	70330567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487
ENSMUSG00000060216.16_70328118_70330731_1	chr11	+	740	8	ISM	ENSMUSG00000060216.16	ENST00000381488.10	1182	13	1752	367	1752	-367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAACACCCCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	70328117	70330731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676
ENSMUSG00000060216.16_70328395_70331098_1	chr11	+	760	8	NNC	ENSMUSG00000060216.16	novel	1182	13	NA	NA	2029	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAGGGGCGGGCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	70328394	70331098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_70328536_70328769_70328850_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ENSMUSG00000060216.16_70328395_70331101_1	chr11	+	768	8	ISM	ENSMUSG00000060216.16	ENST00000381488.10	1182	13	2029	-3	2029	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGGCGGGCAGGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	70328394	70331101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ENSMUSG00000060275.15_36150967_36155438_1	chr18	-	1205	4	ISM	ENSMUSG00000060275.15	ENSMUST00000239409.2	2017	10	46240	0	46240	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCCCCGCCTCGCCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	36155438	36150966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36151736_36154110_36154339_36154905_36155034_36155358
ENSMUSG00000060275.15_36151129_36157425_1	chr18	-	1154	5	ISM	ENSMUSG00000060275.15	ENSMUST00000239409.2	2017	10	44253	162	44253	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGAGCGGCGCACGACGC	NA	NA	NA	NA	NA	NA	NA	NA	36157425	36151128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36151736_36154110_36154339_36154905_36155034_36155358_36155483_36157358
ENSMUSG00000060275.15_36151522_36185937_1	chr18	-	1225	10	ISM	ENSMUSG00000060275.15	ENST00000358522.7	2579	11	144276	554	15741	-554	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGGACATGCAGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	36185937	36151521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36151736_36154110_36154339_36154905_36155034_36155358_36155483_36157358_36157462_36160445_36160470_36164935_36164995_36171283_36171405_36178910_36179030_36185832
ENSMUSG00000060275.15_36151627_36185981_1	chr18	-	1164	10	ISM	ENSMUSG00000060275.15	ENST00000358522.7	2579	11	144232	659	15697	-659	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTGTCGCTGCCGCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	36185981	36151626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36151736_36154110_36154339_36154905_36155034_36155358_36155483_36157358_36157462_36160445_36160470_36164935_36164995_36171283_36171405_36178910_36179030_36185832
ENSMUSG00000060275.15_36154123_36329589_1	chr18	-	1175	10	ISM	ENSMUSG00000060275.15	ENST00000358522.7	2579	11	624	3155	624	-3155	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGTGAAAGGTCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	36329589	36154122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36154339_36154905_36155034_36155358_36155483_36157358_36157462_36160445_36160470_36164935_36164995_36171283_36171405_36178910_36179030_36185832_36186005_36329480
ENSMUSG00000060275.15_36154123_36329647_1	chr18	-	1233	10	ISM	ENSMUSG00000060275.15	ENST00000358522.7	2579	11	566	3155	566	-3155	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGTGAAAGGTCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	36329647	36154122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36154339_36154905_36155034_36155358_36155483_36157358_36157462_36160445_36160470_36164935_36164995_36171283_36171405_36178910_36179030_36185832_36186005_36329480
ENSMUSG00000060275.15_36154246_36329710_1	chr18	-	1173	10	ISM	ENSMUSG00000060275.15	ENST00000358522.7	2579	11	503	3278	503	-3278	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAACAGCCCAGCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	36329710	36154245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36154339_36154905_36155034_36155358_36155483_36157358_36157462_36160445_36160470_36164935_36164995_36171283_36171405_36178910_36179030_36185832_36186005_36329480
ENSMUSG00000060275.15_36154915_36329872_1	chr18	-	1233	9	ISM	ENSMUSG00000060275.15	ENST00000358522.7	2579	11	341	3947	341	-3947	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCACAGGTGAGCGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	36329872	36154914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36155034_36155358_36155483_36157358_36157462_36160445_36160470_36164935_36164995_36171283_36171405_36178910_36179030_36185832_36186005_36329480
ENSMUSG00000060275.15_36155359_36329976_1	chr18	-	1218	8	ISM	ENSMUSG00000060275.15	ENST00000358522.7	2579	11	237	4391	237	-4391	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTGTTCCCAGACC	NA	NA	NA	NA	NA	NA	NA	NA	36329976	36155358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_36155483_36157358_36157462_36160445_36160470_36164935_36164995_36171283_36171405_36178910_36179030_36185832_36186005_36329480
ENSMUSG00000060279.15_44549798_44559252_1	chr7	-	2759	19	ISM	ENSMUSG00000060279.15	ENSMUST00000167930.8	3376	23	19662	0	19598	0	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGACTGCCCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	44559252	44549797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551140_44552173_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122
ENSMUSG00000060279.15_44549927_44565298_1	chr7	-	2664	20	ISM	ENSMUSG00000060279.15	ENSMUST00000167930.8	3376	23	13616	129	13552	-118	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAGGGGCCGAGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	44565298	44549926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551140_44552173_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264
ENSMUSG00000060279.15_44549986_44565356_1	chr7	-	2663	20	ISM	ENSMUSG00000060279.15	ENSMUST00000167930.8	3376	23	13558	188	13494	-177	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTAGGGGGGGGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	44565356	44549985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551140_44552173_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264
ENSMUSG00000060279.15_44550140_44565662_1	chr7	-	2687	21	ISM	ENSMUSG00000060279.15	ENSMUST00000167930.8	3376	23	13252	342	13188	-331	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCAGTGCCAGGCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	44565662	44550139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551140_44552173_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586
ENSMUSG00000060279.15_44550140_44565697_1	chr7	-	2722	21	ISM	ENSMUSG00000060279.15	ENSMUST00000167930.8	3376	23	13217	342	13153	-331	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCAGTGCCAGGCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	44565697	44550139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551140_44552173_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586
ENSMUSG00000060279.15_44550416_44565894_1	chr7	-	2718	21	ISM	ENSMUSG00000060279.15	ENSMUST00000167930.8	3376	23	13020	618	12956	-607	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGTGAGTGCAGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	44565894	44550415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44550546_44550660_44550731_44550807_44550925_44551014_44551140_44552173_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825
ENSMUSG00000060279.15_44550808_44578850_1	chr7	-	2665	20	ISM	ENSMUSG00000060279.15	ENSMUST00000167930.8	3376	23	64	1010	0	-999	5prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGGCGGGGCTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	44578850	44550807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44550925_44551014_44551140_44552173_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ENSMUSG00000060288.14_119157207_119177743_1	chr4	-	793	9	NNC	ENSMUSG00000060288.14	novel	800	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	NA	NA	NA	NA	NA	NA	NA	NA	119177743	119157206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_119157381_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177348_119177431_119177605
ENSMUSG00000060288.14_119164357_119169480_1	chr4	-	919	4	ISM	ENSMUSG00000060288.14	ENSMUST00000106321.9	1288	10	8201	0	8201	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTACCTTGTCTAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	119169480	119164356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_119165081_119167955_119168045_119168728_119168770_119169415
ENSMUSG00000060288.14_119164549_119175783_1	chr4	-	886	6	ISM	ENSMUSG00000060288.14	ENSMUST00000106321.9	1288	10	1898	192	1898	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGAAGTGAACTGATG	NA	NA	NA	NA	NA	NA	NA	NA	119175783	119164548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_119165081_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740
ENSMUSG00000060373.16_52311909_52313146_1	chr14	-	968	3	ISM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	28280	-347	8664	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	NA	NA	NA	NA	NA	NA	NA	NA	52313146	52311908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52312618_52312711_52312894_52313069
ENSMUSG00000060373.16_52311909_52335986_1	chr14	-	1697	8	NNC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	NA	NA	NA	NA	NA	NA	NA	NA	52335986	52311908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335835
ENSMUSG00000060373.16_52311909_52335986_2	chr14	-	1718	8	NNC	ENSMUSG00000060373.16	novel	1750	9	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	NA	NA	NA	NA	NA	NA	NA	NA	52335986	52311908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321872_52335837
ENSMUSG00000060373.16_52311909_52335986_3	chr14	-	1721	9	FSM	ENSMUSG00000060373.16	ENST00000554969.5	1750	9	16	13	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	NA	NA	NA	NA	NA	NA	NA	NA	52335986	52311908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52335837
ENSMUSG00000060373.16_52311909_52335986_4	chr14	-	1719	8	NNC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	NA	NA	NA	NA	NA	NA	NA	NA	52335986	52311908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335813
ENSMUSG00000060373.16_52311909_52335986_5	chr14	-	1708	8	NNC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	NA	NA	NA	NA	NA	NA	NA	NA	52335986	52311908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335824
ENSMUSG00000060373.16_52311909_52341426_1	chr14	-	1650	8	NNC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	NA	NA	NA	NA	NA	NA	NA	NA	52341426	52311908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321872_52341345
ENSMUSG00000060373.16_52312259_52321750_1	chr14	-	897	6	ISM	ENSMUSG00000060373.16	ENST00000556628.5	1039	7	13748	17	60	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAACTGTCTCCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	52321750	52312258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52321696
ENSMUSG00000060373.16_52312259_52321750_2	chr14	-	1119	7	ISM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	19676	3	60	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAACTGTCTCCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	52321750	52312258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571
ENSMUSG00000060373.16_52312259_52321848_1	chr14	-	1074	6	FSM	ENSMUSG00000060373.16	ENST00000556142.5	1438	6	1	363	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAACTGTCTCCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	52321848	52312258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_52312618_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571
ENSMUSG00000060373.16_52312259_52321848_2	chr14	-	1067	7	FSM	ENSMUSG00000060373.16	ENST00000555883.5	1075	7	1	7	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAACTGTCTCCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	52321848	52312258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_52312618_52312711_52312873_52313069_52313164_52314968_52315021_52318716_52318765_52319284_52319361_52321571
ENSMUSG00000060373.16_52312423_52321848_1	chr14	-	831	6	ISM	ENSMUSG00000060373.16	ENST00000556628.5	1039	7	13650	181	1	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGCCTTACCCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	52321848	52312422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52321696
ENSMUSG00000060373.16_52312423_52335498_1	chr14	-	858	7	FSM	ENSMUSG00000060373.16	ENST00000556628.5	1039	7	0	181	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGCCTTACCCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	52335498	52312422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52321696_52321849_52335471
ENSMUSG00000060373.16_52312559_52321679_1	chr14	-	716	7	FSM	ENSMUSG00000060373.16	ENST00000426952.2	853	7	131	6	131	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGGAGGATGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	52321679	52312558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314870_52315021_52318716_52318765_52319284_52319361_52321571
ENSMUSG00000060373.16_52314963_52321627_1	chr14	-	277	4	ISM	ENSMUSG00000060373.16	ENST00000556142.5	1438	6	222	3067	183	-2410	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCAAACGTCAGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	52321627	52314962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52315021_52318716_52318765_52319245_52319361_52321571
ENSMUSG00000060373.16_52321729_52334905_1	chr14	-	247	2	ISM	ENSMUSG00000060373.16	ENST00000420743.6	1430	10	1097	9306	593	-9176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCTGATGTGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	52334905	52321728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52321849_52334778
ENSMUSG00000060373.16_52334819_52335955_1	chr14	-	272	3	ISM	ENSMUSG00000060373.16	ENST00000420743.6	1430	10	47	22396	47	-22266	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGCCTTCGGAACAGATG	NA	NA	NA	NA	NA	NA	NA	NA	52335955	52334818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_52334947_52335471_52335498_52335837
ENSMUSG00000060376.8_25329506_25330814_1	chr7	-	573	3	ISM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	27592	135	27592	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCACCTGTTACAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	25330814	25329505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25329859_25330424_25330597_25330766
ENSMUSG00000060376.8_25329561_25330876_1	chr7	-	580	3	ISM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	27530	190	27530	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTACTTCACTGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	25330876	25329560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25329859_25330424_25330597_25330766
ENSMUSG00000060376.8_25329671_25331168_1	chr7	-	608	4	ISM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	27238	300	27238	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTCCTGCTCTGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	25331168	25329670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062
ENSMUSG00000060376.8_25329726_25331180_1	chr7	-	565	4	ISM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	27226	355	27226	-355	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGGAGCACTACCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	25331180	25329725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062
ENSMUSG00000060376.8_25329769_25331257_1	chr7	-	599	4	ISM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	27149	398	27149	-398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGCAGGCAGCAGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	25331257	25329768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062
ENSMUSG00000060376.8_25330424_25332690_1	chr7	-	548	4	ISM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	25716	1053	25716	-1053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGCCCATTGGAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	25332690	25330423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25330597_25330766_25330909_25331062_25331270_25332664
ENSMUSG00000060376.8_25330478_25332761_1	chr7	-	565	4	ISM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	25645	1107	25645	-1107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGTGGGATGAGGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	25332761	25330477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25330597_25330766_25330909_25331062_25331270_25332664
ENSMUSG00000060376.8_25330536_25332816_1	chr7	-	562	4	ISM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	25590	1165	25590	-1165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGGGACAAGCAGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	25332816	25330535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25330597_25330766_25330909_25331062_25331270_25332664
ENSMUSG00000060376.8_25330854_25340929_1	chr7	-	581	5	ISM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	17477	1483	17477	-1483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTGTGTACAATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	25340929	25330853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25330909_25331062_25331270_25332664_25332827_25337586_25337696_25340881
ENSMUSG00000060376.8_25332676_25358103_1	chr7	-	576	5	ISM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	303	3305	303	-3305	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCTCAGGGTGAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	25358103	25332675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25358057
ENSMUSG00000060376.8_25332733_25358155_1	chr7	-	571	5	ISM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	251	3362	251	-3362	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTACGGCTGCAAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	25358155	25332732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25358057
ENSMUSG00000060376.8_25332771_25358221_1	chr7	-	599	5	ISM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	185	3400	185	-3400	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGTGAATGACCCAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	25358221	25332770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25358057
ENSMUSG00000060402.9_34375244_34452721_1	chr7	-	853	4	FSM	ENSMUSG00000060402.9	ENST00000262622.4	2429	4	516	1060	516	-1059	multi-exon	TRUE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGGTGCTCATGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	34452721	34375243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_34375691_34376059_34376098_34447486_34447703_34452569
ENSMUSG00000060402.9_34375244_34452827_1	chr7	-	959	4	FSM	ENSMUSG00000060402.9	ENST00000262622.4	2429	4	410	1060	410	-1059	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGGTGCTCATGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	34452827	34375243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_34375691_34376059_34376098_34447486_34447703_34452569
ENSMUSG00000060402.9_34375244_34452879_1	chr7	-	1011	4	FSM	ENSMUSG00000060402.9	ENST00000262622.4	2429	4	358	1060	358	-1059	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGGTGCTCATGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	34452879	34375243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_34375691_34376059_34376098_34447486_34447703_34452569
ENSMUSG00000060402.9_34375392_34473317_1	chr7	-	620	4	ISM	ENSMUSG00000060402.9	ENST00000434302.5	2176	5	38792	1207	-20080	-1207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCGTGTGATGCGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	34473317	34375391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_34375691_34376059_34376098_34447486_34447703_34473250
ENSMUSG00000060402.9_34375533_34511865_1	chr7	-	584	5	FSM	ENSMUSG00000060402.9	ENST00000434302.5	2176	5	244	1348	244	-1348	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAGGCGGAGACTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	34511865	34375532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_34375691_34376059_34376098_34447486_34447703_34473250_34473328_34511770
ENSMUSG00000060402.9_34375577_34511929_1	chr7	-	604	5	FSM	ENSMUSG00000060402.9	ENST00000434302.5	2176	5	180	1392	180	-1392	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACCTCACCCGAAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	34511929	34375576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_34375691_34376059_34376098_34447486_34447703_34473250_34473328_34511770
ENSMUSG00000060402.9_34375617_34511997_1	chr7	-	632	5	FSM	ENSMUSG00000060402.9	ENST00000434302.5	2176	5	112	1432	112	-1432	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGCCAAGAGGCCTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	34511997	34375616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_34375691_34376059_34376098_34447486_34447703_34473250_34473328_34511770
ENSMUSG00000060427.16_70064707_70066442_1	chr8	-	505	3	ISM	ENSMUSG00000060427.16	ENSMUST00000074982.7	1269	4	5561	642	5561	-642	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTATGAATGTAAGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	70066442	70064706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_70065107_70066044_70066106_70066398
ENSMUSG00000060450.15_38429723_38449629_1	chr18	+	1732	9	FSM	ENSMUSG00000060450.15	ENSMUST00000072376.13	3040	9	35	1273	-8	-238	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGACGACGATGATGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	38429722	38449629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUSG00000060450.15_38429759_38449680_1	chr18	+	1747	9	FSM	ENSMUSG00000060450.15	ENSMUST00000072376.13	3040	9	71	1222	6	-187	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAATATAGAAGTGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	38429758	38449680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUSG00000060450.15_38432805_38449867_1	chr18	+	1843	8	ISM	ENSMUSG00000060450.15	ENSMUST00000236116.2	2410	10	3074	372	-685	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAGGATCAGAAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	38432804	38449867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUSG00000060450.15_38432925_38447811_1	chr18	+	1236	6	ISM	ENSMUSG00000060450.15	ENSMUST00000170811.8	2886	8	3237	3089	-565	1377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTACAGACATTTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	38432924	38447811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725
ENSMUSG00000060450.15_38433497_38446434_1	chr18	+	1047	4	NNC	ENSMUSG00000060450.15	novel	1052	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTAACCTTTAGAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	38433496	38446434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_38433644_38440942_38441444_38442537_38442767_38446264
ENSMUSG00000060450.15_38433497_38446434_2	chr18	+	1052	4	FSM	ENSMUSG00000060450.15	ENST00000427378.1	1052	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTAACCTTTAGAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	38433496	38446434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_38433644_38440942_38441449_38442537_38442767_38446264
ENSMUSG00000060450.15_38433533_38449648_1	chr18	+	1246	6	ISM	ENSMUSG00000060450.15	ENSMUST00000170811.8	2886	8	3845	1252	36	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACGACGACGACTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	38433532	38449648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUSG00000060450.15_38434708_38450059_1	chr18	+	1699	6	ISM	ENSMUSG00000060450.15	ENSMUST00000236116.2	2410	10	4977	180	1211	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTCACAGCCCCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	38434707	38450059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUSG00000060450.15_38434751_38450121_1	chr18	+	1718	6	ISM	ENSMUSG00000060450.15	ENSMUST00000236116.2	2410	10	5020	118	1254	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATCCGTGCTGTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	38434750	38450121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUSG00000060450.15_38434798_38450239_1	chr18	+	1789	6	ISM	ENSMUSG00000060450.15	ENSMUST00000236116.2	2410	10	5067	0	1301	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATCCTTGTGGGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	38434797	38450239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUSG00000060450.15_38441305_38450651_1	chr18	+	1751	5	ISM	ENSMUSG00000060450.15	ENSMUST00000171461.3	3340	10	11447	238	7808	-73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTCCTAATTCTGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	38441304	38450651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUSG00000060450.15_38442640_38450890_1	chr18	+	1744	4	ISM	ENSMUSG00000060450.15	ENSMUST00000171461.3	3340	10	12782	-1	9143	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTAATTGAAGTAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	38442639	38450890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUSG00000060470.8_95744320_95763319_1	chr8	+	830	7	ISM	ENSMUSG00000060470.8	ENSMUST00000051259.10	2439	12	0	8559	0	-8559	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACAGCCCATCCATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	95744319	95763319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95744449_95747560_95747712_95759985_95760122_95761577_95761725_95762437_95762573_95763068_95763109_95763227
ENSMUSG00000060470.8_95747559_95763566_1	chr8	+	816	7	ISM	ENSMUSG00000060470.8	ENSMUST00000051259.10	2439	12	3239	8312	3239	-8312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGAAGACATCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	95747558	95763566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95747712_95759985_95760122_95761577_95761725_95762437_95762573_95763068_95763109_95763227_95763320_95763453
ENSMUSG00000060470.8_95747664_95766075_1	chr8	+	750	8	ISM	ENSMUSG00000060470.8	ENSMUST00000051259.10	2439	12	3344	5803	3344	-5803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCACATGGCTCTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	95747663	95766075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95747712_95759985_95760122_95761577_95761725_95762437_95762573_95763068_95763109_95763227_95763320_95763453_95763567_95766036
ENSMUSG00000060470.8_95760086_95766217_1	chr8	+	744	7	ISM	ENSMUSG00000060470.8	ENSMUST00000051259.10	2439	12	15766	5661	15766	-5661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGGGTCTGGAGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	95760085	95766217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95760122_95761577_95761725_95762437_95762573_95763068_95763109_95763227_95763320_95763453_95763567_95766036
ENSMUSG00000060470.8_95761670_95766526_1	chr8	+	765	7	ISM	ENSMUSG00000060470.8	ENSMUST00000051259.10	2439	12	17350	5352	17350	-5352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTACACCATTCGCGACC	NA	NA	NA	NA	NA	NA	NA	NA	95761669	95766526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95761725_95762437_95762573_95763068_95763109_95763227_95763320_95763453_95763567_95766036_95766318_95766477
ENSMUSG00000060470.8_95763520_95771077_1	chr8	+	742	5	ISM	ENSMUSG00000060470.8	ENSMUST00000051259.10	2439	12	19200	801	19200	-801	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCACCACAGCCTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	95763519	95771077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95763567_95766036_95766318_95766477_95766572_95766887_95767163_95771032
ENSMUSG00000060470.8_95766120_95771213_1	chr8	+	748	4	ISM	ENSMUSG00000060470.8	ENSMUST00000051259.10	2439	12	21800	665	21800	-665	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGGCTCCACTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	95766119	95771213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95766318_95766477_95766572_95766887_95767163_95771032
ENSMUSG00000060470.8_95766149_95771295_1	chr8	+	801	4	ISM	ENSMUSG00000060470.8	ENSMUST00000051259.10	2439	12	21829	583	21829	-583	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCATTCAGGAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	95766148	95771295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95766318_95766477_95766572_95766887_95767163_95771032
ENSMUSG00000060470.8_95766232_95771317_1	chr8	+	740	4	ISM	ENSMUSG00000060470.8	ENSMUST00000051259.10	2439	12	21912	561	21912	-561	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGACTTGAAGAGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	95766231	95771317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95766318_95766477_95766572_95766887_95767163_95771032
ENSMUSG00000060470.8_95766477_95771496_1	chr8	+	834	3	ISM	ENSMUSG00000060470.8	ENSMUST00000051259.10	2439	12	22157	382	22157	-382	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTAACAGCTCCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	95766476	95771496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_95766572_95766887_95767163_95771032
ENSMUSG00000060475.14_13186199_13211384_1	chr17	-	1544	8	FSM	ENSMUSG00000060475.14	ENSMUST00000159551.8	2060	8	0	516	0	-513	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATTGCTTCAATACC	NA	NA	NA	NA	NA	NA	NA	NA	13211384	13186198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
ENSMUSG00000060475.14_13186242_13211384_1	chr17	-	1501	8	FSM	ENSMUSG00000060475.14	ENSMUST00000159551.8	2060	8	0	559	0	-556	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTTCCTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	13211384	13186241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
ENSMUSG00000060475.14_13193761_13200684_1	chr17	-	777	3	ISM	ENSMUSG00000060475.14	ENSMUST00000160781.8	2442	6	10749	1322	10395	-1322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCAGTAAAATGTAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	13200684	13193760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_13194362_13199708_13199837_13200636
ENSMUSG00000060477.15_113615489_113671495_1	chr6	+	2499	12	FSM	ENSMUSG00000060477.15	ENSMUST00000089022.9	2974	12	0	475	0	-475	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAGATAACCCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	113615488	113671495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_113615603_113624599_113624783_113647159_113647255_113649699_113649901_113649983_113650049_113652591_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663718_113663920_113667743_113668033_113670628
ENSMUSG00000060477.15_113615497_113671541_1	chr6	+	2537	12	FSM	ENSMUSG00000060477.15	ENSMUST00000089022.9	2974	12	8	429	8	-429	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATTCAGCTCTTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	113615496	113671541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_113615603_113624599_113624783_113647159_113647255_113649699_113649901_113649983_113650049_113652591_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663718_113663920_113667743_113668033_113670628
ENSMUSG00000060477.15_113624682_113671676_1	chr6	+	2484	11	ISM	ENSMUSG00000060477.15	ENSMUST00000089022.9	2974	12	9193	294	9193	-294	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTGAAAAGTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	113624681	113671676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113624783_113647159_113647255_113649699_113649901_113649983_113650049_113652591_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663718_113663920_113667743_113668033_113670628
ENSMUSG00000060477.15_113649698_113671970_1	chr6	+	2584	9	ISM	ENSMUSG00000060477.15	ENSMUST00000089022.9	2974	12	34209	0	34209	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGCTGTCTTATAATTT	NA	NA	NA	NA	NA	NA	NA	NA	113649697	113671970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113649901_113649983_113650049_113652591_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663718_113663920_113667743_113668033_113670628
ENSMUSG00000060519.12_156482170_156484085_1	chr1	-	1388	2	ISM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	17841	983	17799	423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGGAGTGTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	156484085	156482169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156483514_156484041
ENSMUSG00000060519.12_156482325_156494300_1	chr1	-	1446	3	ISM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	7626	1138	7584	268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCCCCTCTTATTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	156494300	156482324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156483514_156484041_156484167_156494168
ENSMUSG00000060519.12_156482372_156494300_1	chr1	-	1399	3	ISM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	7626	1185	7584	221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCCTTCACACTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	156494300	156482371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156483514_156484041_156484167_156494168
ENSMUSG00000060519.12_156482448_156494304_1	chr1	-	1327	3	ISM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	7622	1261	7580	145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTCCTGAGGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	156494304	156482447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156483514_156484041_156484167_156494168
ENSMUSG00000060519.12_156482593_156497061_1	chr1	-	1346	4	ISM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	4865	1406	4823	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCCTTTCTTACTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	156497061	156482592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940
ENSMUSG00000060519.12_156482737_156501144_1	chr1	-	1392	5	ISM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	782	1550	740	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACCTGAGCTGCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	156501144	156482736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940_156497207_156501099
ENSMUSG00000060519.12_156482821_156501165_1	chr1	-	1329	5	ISM	ENSMUSG00000060519.12	ENSMUST00000188964.7	1750	7	719	228	719	-228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGGCTAAAGGACAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	156501165	156482820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940_156497207_156501099
ENSMUSG00000060519.12_156482923_156501732_1	chr1	-	1355	6	FSM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	194	1736	152	-330	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGCGTGTGGTCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	156501732	156482922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940_156497207_156501099_156501217_156501655
ENSMUSG00000060519.12_156482970_156501884_1	chr1	-	1460	6	FSM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	42	1783	0	-377	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTCTAGGATCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	156501884	156482969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940_156497207_156501099_156501217_156501655
ENSMUSG00000060519.12_156483046_156501884_1	chr1	-	1384	6	FSM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	42	1859	0	-453	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATCCTCAGAACACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	156501884	156483045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940_156497207_156501099_156501217_156501655
ENSMUSG00000060534.17_71395876_71460515_1	chr18	-	683	5	ISM	ENSMUSG00000060534.17	ENSMUST00000073379.6	4855	29	1023573	3815	354875	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCTTTGATCACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	71460515	71395875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71396021_71432401_71432615_71439042_71439205_71454101_71454219_71460469
ENSMUSG00000060534.17_71395965_71460528_1	chr18	-	607	5	ISM	ENSMUSG00000060534.17	ENSMUST00000073379.6	4855	29	1023560	3904	354862	-89	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGTCCCCTTTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	71460528	71395964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71396021_71432401_71432615_71439042_71439205_71454101_71454219_71460469
ENSMUSG00000060534.17_71432557_71469066_1	chr18	-	621	5	ISM	ENSMUSG00000060534.17	ENSMUST00000073379.6	4855	29	1015022	40496	346324	-36681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCCGAGCAGTGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	71469066	71432556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71432615_71439042_71439205_71454101_71454219_71460469_71460697_71469009
ENSMUSG00000060534.17_71439041_71469172_1	chr18	-	671	4	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	346218	43165	346218	-43165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCATTTTCTTTCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	71469172	71439040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71439205_71454101_71454219_71460469_71460697_71469009
ENSMUSG00000060534.17_71439146_71475822_1	chr18	-	606	5	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	339568	43270	339568	-43270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTCCCACATGTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	71475822	71439145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71439205_71454101_71454219_71460469_71460697_71469009_71469173_71475782
ENSMUSG00000060534.17_71454177_71500177_1	chr18	-	593	6	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	315213	58301	315213	-58301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGTCCCTGGCAGCACGC	NA	NA	NA	NA	NA	NA	NA	NA	71500177	71454176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71454219_71460469_71460697_71469009_71469173_71475782_71475849_71496040_71496074_71500115
ENSMUSG00000060534.17_71460547_71503747_1	chr18	-	633	6	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	311643	64671	311643	-64671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGCCAAGATCTCACAC	NA	NA	NA	NA	NA	NA	NA	NA	71503747	71460546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71460697_71469009_71469173_71475782_71475849_71496040_71496074_71500115_71500311_71503721
ENSMUSG00000060534.17_71460617_71503780_1	chr18	-	596	6	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	311610	64741	311610	-64741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAATGGAAATGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	71503780	71460616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71460697_71469009_71469173_71475782_71475849_71496040_71496074_71500115_71500311_71503721
ENSMUSG00000060534.17_71460679_71503829_1	chr18	-	583	6	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	311561	64803	311561	-64803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGCAAGAGGAAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	71503829	71460678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71460697_71469009_71469173_71475782_71475849_71496040_71496074_71500115_71500311_71503721
ENSMUSG00000060534.17_71469145_71511758_1	chr18	-	602	7	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	303632	73269	303632	-73269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGCAGTGTCACTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	71511758	71469144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71469173_71475782_71475849_71496040_71496074_71500115_71500311_71503721_71503830_71507543_71507683_71511725
ENSMUSG00000060534.17_71500201_71517264_1	chr18	-	596	5	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	298126	104325	298126	-104325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATGTATTACTTTCGAAT	NA	NA	NA	NA	NA	NA	NA	NA	71517264	71500200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71500311_71503721_71503830_71507543_71507683_71511725_71511899_71517198
ENSMUSG00000060534.17_71500281_71553372_1	chr18	-	623	6	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	262018	104405	262018	-104405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACCAATAGATGATTGG	NA	NA	NA	NA	NA	NA	NA	NA	71553372	71500280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71500311_71503721_71503830_71507543_71507683_71511725_71511899_71517198_71517295_71553295
ENSMUSG00000060534.17_71507632_71579479_1	chr18	-	587	5	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	235911	111756	235911	-111756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTACGAGTTCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	71579479	71507631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71507683_71511725_71511899_71517198_71517295_71553295_71553491_71579407
ENSMUSG00000060534.17_71511816_71590053_1	chr18	-	597	5	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	225337	115940	225337	-115940	internal_fragment	TRUE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTGTCCCGAAGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	71590053	71511815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71511899_71517198_71517295_71553295_71553491_71579407_71579519_71589941
ENSMUSG00000060534.17_71517254_71680426_1	chr18	-	592	6	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	134964	121378	134964	-121378	internal_fragment	TRUE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCGGAGAAGGTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	71680426	71517253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71517295_71553295_71553491_71579407_71579519_71589941_71590084_71675315_71675366_71680373
ENSMUSG00000060534.17_71553369_71682115_1	chr18	-	606	6	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	133275	157493	133275	-157493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTGGCAGTCCTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	71682115	71553368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71553491_71579407_71579519_71589941_71590084_71675315_71675366_71680373_71680513_71682073
ENSMUSG00000060534.17_71553421_71682164_1	chr18	-	603	6	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	133226	157545	133226	-157545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACCTCCTCTCAACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	71682164	71553420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71553491_71579407_71579519_71589941_71590084_71675315_71675366_71680373_71680513_71682073
ENSMUSG00000060534.17_71579457_71708208_1	chr18	-	609	6	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	107182	183581	107182	-183581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTTCCAACTGGTACAC	NA	NA	NA	NA	NA	NA	NA	NA	71708208	71579456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71579519_71589941_71590084_71675315_71675366_71680373_71680513_71682073_71682223_71708141
ENSMUSG00000060534.17_71579491_71708279_1	chr18	-	646	6	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	107111	183615	107111	-183615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTGTCGGCCATGACAG	NA	NA	NA	NA	NA	NA	NA	NA	71708279	71579490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71579519_71589941_71590084_71675315_71675366_71680373_71680513_71682073_71682223_71708141
ENSMUSG00000060534.17_71590031_71720991_1	chr18	-	596	6	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	94399	194155	94399	-194155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGGCTATAAAATTCGAC	NA	NA	NA	NA	NA	NA	NA	NA	71720991	71590030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71590084_71675315_71675366_71680373_71680513_71682073_71682223_71708141_71708297_71720941
ENSMUSG00000060534.17_71675316_71721098_1	chr18	-	650	5	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	94292	279440	94292	-279440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCAGCCAATGGATAT	NA	NA	NA	NA	NA	NA	NA	NA	71721098	71675315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71675366_71680373_71680513_71682073_71682223_71708141_71708297_71720941
ENSMUSG00000060534.17_71680448_71812608_1	chr18	-	603	5	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	2782	284572	2782	-284572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGATTCCTAGCTTATAATC	NA	NA	NA	NA	NA	NA	NA	NA	71812608	71680447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71680513_71682073_71682223_71708141_71708297_71720941_71721099_71812531
ENSMUSG00000060534.17_71682074_71815297_1	chr18	-	647	5	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	93	286198	93	-286198	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGTAAGAAATGAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	71815297	71682073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71682223_71708141_71708297_71720941_71721099_71812531_71812653_71815232
ENSMUSG00000060534.17_71682150_71815327_1	chr18	-	601	5	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	63	286274	63	-286274	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCTGCCTATGCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	71815327	71682149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71682223_71708141_71708297_71720941_71721099_71812531_71812653_71815232
ENSMUSG00000060534.17_71682192_71815387_1	chr18	-	619	5	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	3	286316	3	-286316	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTATCTACCTCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	71815387	71682191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_71682223_71708141_71708297_71720941_71721099_71812531_71812653_71815232
ENSMUSG00000060538.15_126485392_126496275_1	chr7	-	764	5	FSM	ENSMUSG00000060538.15	ENSMUST00000120007.8	1087	5	321	2	321	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTGTAAGGTACTTAC	NA	NA	NA	NA	NA	NA	NA	NA	126496275	126485391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197
ENSMUSG00000060538.15_126485392_126496408_1	chr7	-	897	5	FSM	ENSMUSG00000060538.15	ENSMUST00000120007.8	1087	5	188	2	188	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTGTAAGGTACTTAC	NA	NA	NA	NA	NA	NA	NA	NA	126496408	126485391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197
ENSMUSG00000060538.15_126488061_126497425_1	chr7	-	824	5	ISM	ENSMUSG00000060538.15	ENSMUST00000032926.12	941	6	23	2669	0	-2669	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCTGTGGGAACTAGG	NA	NA	NA	NA	NA	NA	NA	NA	126497425	126488060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_126488233_126490774_126491005_126495920_126496111_126496197_126496400_126497395
ENSMUSG00000060572.18_140741102_140743295_2	chr4	+	871	5	NNC	ENSMUSG00000060572.18	novel	890	6	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCGTCCAGGGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	140741101	140743295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_140741190_140741499_140741613_140742293_140742382_140742525_140742600_140742787
ENSMUSG00000060572.18_140741102_140743295_3	chr4	+	879	6	FSM	ENSMUSG00000060572.18	ENST00000375535.4	890	6	22	-11	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCGTCCAGGGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	140741101	140743295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_140741171_140741366_140741394_140741499_140741613_140742293_140742382_140742525_140742600_140742787
ENSMUSG00000060572.18_140741498_140742886_1	chr4	+	376	4	FSM	ENSMUSG00000060572.18	ENST00000375534.7	774	4	0	398	0	-239	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGGGTGGAGCTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	140741497	140742886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_140741613_140742293_140742382_140742525_140742600_140742787
ENSMUSG00000060586.12_34528549_34533429_1	chr17	+	572	2	ISM	ENSMUSG00000060586.12	ENST00000437650.2	664	4	-41	1125	-41	-1125	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTAACTTCCAGACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	34528548	34533429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34528835_34533143
ENSMUSG00000060586.12_34528724_34534553_1	chr17	+	528	4	ISM	ENSMUSG00000060586.12	ENSMUST00000235530.2	1669	6	3883	1095	134	-1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACACCCATTGTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	34528723	34534553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_34528835_34533143_34533426_34534016_34534128_34534529
ENSMUSG00000060591.10_140534750_140535900_1	chr7	-	649	2	NNC	ENSMUSG00000060591.10	novel	655	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	140535900	140534749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_140535087_140535588
ENSMUSG00000060591.10_140534750_140535900_2	chr7	-	650	2	NNC	ENSMUSG00000060591.10	novel	655	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	140535900	140534749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_140535082_140535582
ENSMUSG00000060594.7_50965940_50988347_1	chr9	-	1481	9	FSM	ENSMUSG00000060594.7	ENSMUST00000217212.2	1500	9	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCAAATCCGTAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	50988347	50965939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_50966396_50968793_50968957_50970756_50970857_50973482_50973567_50974536_50974573_50979338_50979497_50985147_50985446_50987621_50987646_50988185
ENSMUSG00000060594.7_50968080_50988347_2	chr9	-	1735	8	NNC	ENSMUSG00000060594.7	novel	1786	8	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTCTGTGTCTACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	50988347	50968079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_50968949_50970752_50970857_50973482_50973567_50974536_50974573_50979338_50979497_50985147_50985446_50987621_50987646_50988185
ENSMUSG00000060594.7_50968080_50988347_5	chr9	-	1739	8	FSM	ENSMUSG00000060594.7	ENSMUST00000098782.4	1786	8	47	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTCTGTGTCTACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	50988347	50968079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_50968957_50970756_50970857_50973482_50973567_50974536_50974573_50979338_50979497_50985147_50985446_50987621_50987646_50988185
ENSMUSG00000060600.16_70548028_70553339_1	chr11	+	1446	12	NNC	ENSMUSG00000060600.16	novel	1454	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGTGTTCCTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	70548027	70553339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_70548094_70548697_70548785_70548990_70549087_70549214_70549274_70549428_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ENSMUSG00000060600.16_70548028_70553339_2	chr11	+	1448	12	NNC	ENSMUSG00000060600.16	novel	1454	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGTGTTCCTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	70548027	70553339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_70548094_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549982_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ENSMUSG00000060600.16_70548028_70553339_3	chr11	+	1446	12	NNC	ENSMUSG00000060600.16	novel	1454	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGTGTTCCTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	70548027	70553339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_70548094_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551830_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ENSMUSG00000060600.16_70548028_70553339_4	chr11	+	1448	12	NNC	ENSMUSG00000060600.16	novel	1454	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGTGTTCCTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	70548027	70553339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_70548094_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553045_70553099_70553188
ENSMUSG00000060600.16_70548028_70553339_5	chr11	+	1447	12	NNC	ENSMUSG00000060600.16	novel	1454	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGTGTTCCTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	70548027	70553339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_70548094_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553195
ENSMUSG00000060601.14_44199040_44203335_1	chr7	-	1955	10	NNC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	44203335	44199039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201029_44201284_44201378_44201670_44201930_44202045_44202120_44202179_44203002_44203133_44203232
ENSMUSG00000060601.14_44199040_44203335_2	chr7	-	1955	10	NNC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	44203335	44199039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44199550_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202179_44203002_44203133_44203232
ENSMUSG00000060601.14_44199040_44203335_3	chr7	-	1953	10	NNC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	12	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	44203335	44199039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44199556_44199723_44199925_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202179_44203002_44203133_44203232
ENSMUSG00000060636.15_32876823_32880559_1	chr16	+	477	4	NNC	ENSMUSG00000060636.15	novel	491	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTCTCTTTGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	32876822	32880559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_32876881_32877730_32877913_32879048_32879194_32880467
ENSMUSG00000060636.15_32876823_32880559_2	chr16	+	485	5	NNC	ENSMUSG00000060636.15	novel	491	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTCTCTTTGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	32876822	32880559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_32876875_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ENSMUSG00000060636.15_32876823_32880559_3	chr16	+	486	5	NNC	ENSMUSG00000060636.15	novel	491	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTCTCTTTGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	32876822	32880559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_32876881_32877505_32877549_32877759_32877913_32879048_32879189_32880467
ENSMUSG00000060636.15_32876823_32880559_4	chr16	+	483	5	NNC	ENSMUSG00000060636.15	novel	491	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTCTCTTTGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	32876822	32880559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_32876881_32877505_32877549_32877759_32877913_32879056_32879194_32880467
ENSMUSG00000060679.15_42890445_42944592_1	chr1	+	1116	11	FSM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	52	250	52	-250	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGAACGGAAGAAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	42890444	42944592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ENSMUSG00000060679.15_42890445_42944622_1	chr1	+	1146	11	FSM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	52	220	52	-220	multi-exon	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTCGAAGAAAGTTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	42890444	42944622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ENSMUSG00000060679.15_42890445_42944652_1	chr1	+	1176	11	FSM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	52	190	52	-190	multi-exon	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAACTTTTCCCAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	42890444	42944652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ENSMUSG00000060679.15_42890557_42944685_1	chr1	+	1097	11	FSM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	164	157	164	-157	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTCGTGCCTGGCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	42890556	42944685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ENSMUSG00000060679.15_42901674_42944843_1	chr1	+	1180	10	ISM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	11281	-1	11281	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCCTTTTTTTTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	42901673	42944843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ENSMUSG00000060679.15_42918915_42944843_2	chr1	+	1045	9	ISM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	28522	-1	28522	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCCTTTTTTTTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	42918914	42944843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ENSMUSG00000060716.8_79087355_79101518_1	chr12	+	546	6	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	56	25180	56	-25180	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTGTGGAGCAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	79087354	79101518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433
ENSMUSG00000060716.8_79101842_79110922_1	chr12	+	551	4	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	14543	15776	14543	-15776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGAGTCCTCCGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	79101841	79110922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79102189_79108745_79108828_79109308_79109401_79110892
ENSMUSG00000060716.8_79101896_79110980_1	chr12	+	555	4	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	14597	15718	14597	-15718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCCCTGCTCTGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	79101895	79110980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79102189_79108745_79108828_79109308_79109401_79110892
ENSMUSG00000060716.8_79102033_79111300_1	chr12	+	560	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	14734	15398	14734	-15398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCCTGAGCACAAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	79102032	79111300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221
ENSMUSG00000060716.8_79108745_79112545_1	chr12	+	576	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	21446	14153	21446	-14153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACCCTCCTCAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	79108744	79112545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79108828_79109308_79109401_79110892_79111044_79111221_79111361_79112434
ENSMUSG00000060716.8_79109316_79113445_1	chr12	+	537	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	22017	13253	22017	-13253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTGTTCGAGAGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	79109315	79113445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79109401_79110892_79111044_79111221_79111361_79112434_79112546_79113394
ENSMUSG00000060716.8_79110892_79113903_1	chr12	+	545	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	23593	12795	23593	-12795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGATCCGTGTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	79110891	79113903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79111044_79111221_79111361_79112434_79112546_79113394_79113482_79113847
ENSMUSG00000060716.8_79110999_79114012_1	chr12	+	547	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	23700	12686	23700	-12686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGTGGAGCTAGTAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	79110998	79114012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79111044_79111221_79111361_79112434_79112546_79113394_79113482_79113847
ENSMUSG00000060716.8_79111294_79115174_1	chr12	+	537	6	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	23995	11524	23995	-11524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTCACATAGAGGAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	79111293	79115174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79111361_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145
ENSMUSG00000060716.8_79112472_79115286_1	chr12	+	545	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	25173	11412	25173	-11412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCCCCACCTACCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	79112471	79115286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145
ENSMUSG00000060716.8_79113406_79115843_1	chr12	+	553	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	26107	10855	26107	-10855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCACTGTCTATGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	79113405	79115843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792
ENSMUSG00000060716.8_79113849_79116697_1	chr12	+	554	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	26550	10001	26550	-10001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGCTGTGCTACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	79113848	79116697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677
ENSMUSG00000060716.8_79113924_79116752_1	chr12	+	534	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	26625	9946	26625	-9946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGGCCCTGCAGACGGAG	NA	NA	NA	NA	NA	NA	NA	NA	79113923	79116752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677
ENSMUSG00000060716.8_79114753_79117647_1	chr12	+	555	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	27454	9051	27454	-9051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTTCACCCTGAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	79114752	79117647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561
ENSMUSG00000060716.8_79115232_79118147_1	chr12	+	573	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	27933	8551	27933	-8551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACGCCATGCAGACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	79115231	79118147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070
ENSMUSG00000060716.8_79117692_79121427_1	chr12	+	543	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	30393	5271	30393	-5271	internal_fragment	TRUE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGACACGAGTCGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	79117691	79121427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363
ENSMUSG00000060716.8_79118097_79122239_1	chr12	+	572	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	30798	4459	30798	-4459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGGAGAAATAGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	79118096	79122239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174
ENSMUSG00000060716.8_79119619_79123311_1	chr12	+	552	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	32320	3387	32320	-3387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTGACAGGTTTTACCC	NA	NA	NA	NA	NA	NA	NA	NA	79119618	79123311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227
ENSMUSG00000060716.8_79120180_79123504_1	chr12	+	560	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	32881	3194	32881	-3194	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGGCAGCGTTACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	79120179	79123504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479
ENSMUSG00000060716.8_79120247_79123548_1	chr12	+	537	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	32948	3150	32948	-3150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTACCTGACTGTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	79120246	79123548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479
ENSMUSG00000060716.8_79121373_79125490_1	chr12	+	576	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	34074	1208	34074	-1208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACCACCGCACCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	79121372	79125490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421
ENSMUSG00000060716.8_79122223_79125832_1	chr12	+	553	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	34924	866	34924	-866	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAACCCGTATTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	79122222	79125832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733
ENSMUSG00000060716.8_79122281_79125880_1	chr12	+	543	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	34982	818	34982	-818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTCTGACAGCTACTAT	NA	NA	NA	NA	NA	NA	NA	NA	79122280	79125880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733
ENSMUSG00000060716.8_79123262_79126291_1	chr12	+	553	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	35963	407	35963	-407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCGCCAGCCCCGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	79123261	79126291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ENSMUSG00000060716.8_79123335_79126333_1	chr12	+	522	5	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	36036	365	36036	-365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCTGCACTAAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	79123334	79126333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ENSMUSG00000060739.9_97265932_97271952_1	chr13	-	2329	4	ISM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	2493	0	2408	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTGGTCTAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	97271952	97265931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801
ENSMUSG00000060739.9_97266039_97272059_1	chr13	-	2253	5	ISM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	2386	107	2301	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGACTGACATTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	97272059	97266038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028
ENSMUSG00000060739.9_97266084_97272115_1	chr13	-	2264	5	ISM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	2330	152	2245	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGGTAAAAGGAAAGTAGACA	NA	NA	NA	NA	NA	NA	NA	NA	97272115	97266083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028
ENSMUSG00000060739.9_97266138_97272174_1	chr13	-	2269	5	ISM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	2271	206	2186	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCAAAGTAGACCATTAG	NA	NA	NA	NA	NA	NA	NA	NA	97272174	97266137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028
ENSMUSG00000060739.9_97266260_97274360_1	chr13	-	2287	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	85	328	0	-328	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTGACCACAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	97274360	97266259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
ENSMUSG00000060739.9_97266315_97274393_1	chr13	-	2265	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	52	383	-33	-383	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAGTAGTATTAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	97274393	97266314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
ENSMUSG00000060743.13_180630469_180637700_1	chr1	-	321	2	ISM	ENSMUSG00000060743.13	ENST00000666609.1	608	4	2689	-134	2689	120	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGTGTGTGAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	180637700	180630468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180630771_180637681
ENSMUSG00000060743.13_180630589_180637739_1	chr1	-	240	2	ISM	ENSMUSG00000060743.13	ENST00000666609.1	608	4	2650	-14	2650	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTTATCAGTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	180637739	180630588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180630771_180637681
ENSMUSG00000060743.13_180630589_180637792_1	chr1	-	293	2	ISM	ENSMUSG00000060743.13	ENST00000666609.1	608	4	2597	-14	2597	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTTATCAGTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	180637792	180630588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180630771_180637681
ENSMUSG00000060743.13_180630589_180640389_1	chr1	-	614	4	NNC	ENSMUSG00000060743.13	novel	608	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1211	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTTATCAGTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	180640389	180630588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_180630768_180637681_180637836_180639363_180639510_180640254
ENSMUSG00000060743.13_180630589_180640389_2	chr1	-	615	4	NNC	ENSMUSG00000060743.13	novel	608	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1375	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTTATCAGTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	180640389	180630588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_180630771_180637681_180637836_180639370_180639515_180640254
ENSMUSG00000060743.13_180630589_180640389_3	chr1	-	619	4	NIC	ENSMUSG00000060743.13	novel	608	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTTATCAGTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	180640389	180630588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_-_180630768_180637681_180637836_180639363_180639515_180640254
ENSMUSG00000060743.13_180637798_180641099_1	chr1	-	253	3	ISM	ENSMUSG00000060743.13	ENSMUST00000081026.11	888	4	13	7536	13	-7195	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTCCACTGAACTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	180641099	180637797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_180637836_180639363_180639515_180641035
ENSMUSG00000060771.16_37794082_37800130_1	chr1	-	622	2	ISM	ENSMUSG00000060771.16	ENST00000674128.1	3027	16	94326	234	94325	182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCACAGTCTACCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	37800130	37794081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_37794603_37800029
ENSMUSG00000060771.16_37794218_37800586_1	chr1	-	608	3	ISM	ENSMUSG00000060771.16	ENST00000674128.1	3027	16	93870	370	93869	46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTTGGTTAGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	37800586	37794217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_37794603_37800029_37800177_37800510
ENSMUSG00000060771.16_37794334_37802487_1	chr1	-	621	4	ISM	ENSMUSG00000060771.16	ENST00000674128.1	3027	16	91969	486	91968	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATCACTATTGAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	37802487	37794333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_37794603_37800029_37800177_37800510_37800616_37802387
ENSMUSG00000060771.16_37794485_37822984_1	chr1	-	660	5	ISM	ENSMUSG00000060771.16	ENST00000674128.1	3027	16	71472	637	71471	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATGCTTGACAGGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	37822984	37794484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_37794603_37800029_37800177_37800510_37800616_37802387_37802591_37822897
ENSMUSG00000060771.16_37794555_37823031_1	chr1	-	637	5	ISM	ENSMUSG00000060771.16	ENST00000674128.1	3027	16	71425	707	71424	-291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGGAAAGGTCAAAGATAC	NA	NA	NA	NA	NA	NA	NA	NA	37823031	37794554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_37794603_37800029_37800177_37800510_37800616_37802387_37802591_37822897
ENSMUSG00000060771.16_37802527_37846075_1	chr1	-	629	5	ISM	ENSMUSG00000060771.16	ENSMUST00000114902.8	2724	18	48380	2623	48380	-2623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGATCTCCATGCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	37846075	37802526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_37802591_37822897_37823108_37840800_37840987_37843709_37843821_37846017
ENSMUSG00000060771.16_37823021_37873345_1	chr1	-	632	5	ISM	ENSMUSG00000060771.16	ENST00000674128.1	3027	16	21111	29173	21110	-23117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGAGAAGGTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	37873345	37823020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_37823108_37840800_37840987_37843709_37843821_37846017_37846187_37873266
ENSMUSG00000060771.16_37840880_37874409_1	chr1	-	610	5	ISM	ENSMUSG00000060771.16	ENST00000674128.1	3027	16	20047	47032	20046	30604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGAACTTATCACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	37874409	37840879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_37840987_37843709_37843821_37846017_37846187_37873266_37873419_37874338
ENSMUSG00000060771.16_37843759_37854685_1	chr1	-	360	4	ISM	ENSMUSG00000060771.16	ENSMUST00000114902.8	2724	18	39770	43855	39770	27725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACGAATCTGGAGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	37854685	37843758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_37843821_37846017_37846187_37850052_37850109_37854612
ENSMUSG00000060771.16_37846070_37879705_1	chr1	-	644	5	ISM	ENSMUSG00000060771.16	ENST00000674128.1	3027	16	14751	52222	14750	25414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATGACAATCTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	37879705	37846069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_37846187_37873266_37873419_37874338_37874417_37874502_37874674_37879579
ENSMUSG00000060771.16_37846107_37858677_1	chr1	-	363	4	ISM	ENSMUSG00000060771.16	ENSMUST00000114902.8	2724	18	35778	46203	35778	25377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCAGATTGCCAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	37858677	37846106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_37846187_37850052_37850109_37854612_37854768_37858605
ENSMUSG00000060771.16_37850071_37873321_1	chr1	-	364	4	ISM	ENSMUSG00000060771.16	ENSMUST00000114902.8	2724	18	21134	50167	21134	21413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAACAGGCATCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	37873321	37850070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_37850109_37854612_37854768_37858605_37858722_37873266
ENSMUSG00000060860.9_4811296_4813524_1	chr7	-	292	2	ISM	ENSMUSG00000060860.9	ENSMUST00000079496.9	1238	4	2065	283	2065	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCTCTGCTGACCCTA	NA	NA	NA	NA	NA	NA	NA	NA	4813524	4811295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4811484_4813420
ENSMUSG00000060860.9_4814450_4815355_1	chr7	-	300	2	ISM	ENSMUSG00000060860.9	ENSMUST00000079496.9	1238	4	234	3437	234	-3437	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGATCTCACAGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	4815355	4814449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4814556_4815161
ENSMUSG00000060890.12_99649168_99658345_2	chrX	+	957	11	ISM	ENSMUSG00000060890.12	ENST00000374495.7	1161	13	45	2735	45	-2735	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCTCATATGTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	99649167	99658345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99649228_99650488_99650520_99650669_99650731_99650927_99650973_99655353_99655554_99655657_99655718_99656395_99656464_99657103_99657240_99657434_99657520_99657736_99657810_99658207
ENSMUSG00000060890.12_99650489_99660589_1	chrX	+	981	11	ISM	ENSMUSG00000060890.12	ENST00000374495.7	1161	13	1366	491	1366	-491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAGGATTTCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	99650488	99660589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99650520_99650669_99650731_99650927_99650973_99655353_99655554_99655657_99655718_99656395_99656464_99657103_99657240_99657434_99657520_99657736_99657810_99658207_99658346_99660505
ENSMUSG00000060890.12_99650668_99660589_1	chrX	+	952	10	ISM	ENSMUSG00000060890.12	ENST00000374495.7	1161	13	1545	491	1545	-491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAGGATTTCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	99650667	99660589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99650731_99650927_99650973_99655353_99655554_99655657_99655718_99656395_99656464_99657103_99657240_99657434_99657520_99657736_99657810_99658207_99658346_99660505
ENSMUSG00000060890.12_99650927_99661080_1	chrX	+	965	10	ISM	ENSMUSG00000060890.12	ENST00000374495.7	1161	13	1804	0	1804	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAGAGAGCAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	99650926	99661080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99650973_99655353_99655554_99655657_99655718_99656395_99656464_99657103_99657240_99657434_99657520_99657736_99657810_99658207_99658346_99660505_99660590_99661005
ENSMUSG00000060890.12_99655445_99661080_1	chrX	+	828	9	ISM	ENSMUSG00000060890.12	ENST00000374495.7	1161	13	6322	0	6322	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAGAGAGCAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	99655444	99661080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_99655554_99655657_99655718_99656395_99656464_99657103_99657240_99657434_99657520_99657736_99657810_99658207_99658346_99660505_99660590_99661005
ENSMUSG00000060904.15_88566930_88579956_1	chr10	+	2075	6	NNC	ENSMUSG00000060904.15	novel	2080	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGATGTCTTTAGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	88566929	88579956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577948_88578889
ENSMUSG00000060904.15_88566930_88579956_2	chr10	+	2077	6	NNC	ENSMUSG00000060904.15	novel	2080	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3830	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGATGTCTTTAGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	88566929	88579956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_88567427_88569404_88569543_88571759_88571835_88572952_88573065_88577768_88577952_88578884
ENSMUSG00000060904.15_88566930_88579956_3	chr10	+	2077	6	NNC	ENSMUSG00000060904.15	novel	2080	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGATGTCTTTAGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	88566929	88579956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573058_88577768_88577952_88578884
ENSMUSG00000060904.15_88566930_88579956_4	chr10	+	2075	6	NNC	ENSMUSG00000060904.15	novel	2080	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGATGTCTTTAGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	88566929	88579956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577943_88578884
ENSMUSG00000060913.7_19698638_19745891_1	chr3	+	983	5	NNC	ENSMUSG00000060913.7	novel	2595	10	NA	NA	0	14	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATACAACACCACCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	19698637	19745891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_19698941_19699437_19699611_19713291_19713458_19715954_19716045_19745640
ENSMUSG00000060913.7_19698638_19745891_2	chr3	+	989	5	FSM	ENSMUSG00000060913.7	ENST00000350034.4	1073	5	98	-14	0	14	multi-exon	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATACAACACCACCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	19698637	19745891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_19698941_19699437_19699611_19713291_19713458_19715948_19716045_19745640
ENSMUSG00000060913.7_19698638_19745891_3	chr3	+	984	5	NNC	ENSMUSG00000060913.7	novel	2595	10	NA	NA	0	14	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATACAACACCACCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	19698637	19745891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_19698941_19699437_19699611_19713296_19713458_19715948_19716045_19745640
ENSMUSG00000060913.7_19698672_19730011_1	chr3	+	1706	9	ISM	ENSMUSG00000060913.7	ENST00000276573.11	1959	10	132	15750	34	-15750	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAAATATTTTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	19698671	19730011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_19698941_19699437_19699611_19713291_19713458_19715948_19716045_19725087_19725322_19725668_19725819_19726919_19727162_19728417_19728706_19729923
ENSMUSG00000060913.7_19698776_19745696_1	chr3	+	1658	10	FSM	ENSMUSG00000060913.7	ENST00000276573.11	1959	10	236	65	138	-65	multi-exon	FALSE	canonical	NA	NA	NA	NA	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGATCCTGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	19698775	19745696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_19698941_19699437_19699611_19713291_19713458_19715948_19716045_19725087_19725322_19725668_19725819_19726919_19727162_19728417_19728706_19729923_19730012_19745640
ENSMUSG00000060913.7_19698829_19745749_1	chr3	+	1658	10	FSM	ENSMUSG00000060913.7	ENST00000276573.11	1959	10	289	12	191	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTAAATGAATAATATTTA	NA	NA	NA	NA	NA	NA	NA	NA	19698828	19745749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_19698941_19699437_19699611_19713291_19713458_19715948_19716045_19725087_19725322_19725668_19725819_19726919_19727162_19728417_19728706_19729923_19730012_19745640
ENSMUSG00000060913.7_19698845_19745759_1	chr3	+	1647	10	NNC	ENSMUSG00000060913.7	novel	1959	10	NA	NA	207	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATATTTATTCTCGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	19698844	19745759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_19698941_19699437_19699611_19713296_19713458_19715948_19716045_19725087_19725322_19725668_19725819_19726919_19727162_19728417_19728706_19729923_19730012_19745640
ENSMUSG00000060935.7_84938491_84950638_1	chr10	+	805	3	FSM	ENSMUSG00000060935.7	ENSMUST00000095383.6	3616	3	0	2811	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTAAACTGCTGTGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	84938490	84950638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_84938862_84946662_84946730_84950271
ENSMUSG00000060935.7_84938607_84950638_1	chr10	+	689	3	FSM	ENSMUSG00000060935.7	ENSMUST00000095383.6	3616	3	116	2811	116	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTAAACTGCTGTGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	84938606	84950638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_84938862_84946662_84946730_84950271
ENSMUSG00000060935.7_84939675_84950638_1	chr10	+	675	3	FSM	ENSMUSG00000060935.7	ENST00000547081.1	770	3	95	0	95	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTAAACTGCTGTGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	84939674	84950638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_84939916_84946662_84946730_84950271
ENSMUSG00000060935.7_84946688_84950934_1	chr10	+	705	2	ISM	ENSMUSG00000060935.7	ENST00000547081.1	770	3	7108	-296	7108	296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTTTGATGTGCCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	84946687	84950934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_84946730_84950271
ENSMUSG00000060938.15_68792409_68795360_1	chr11	+	520	4	NIC	ENSMUSG00000060938.15	novel	526	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	13576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCTTGTGTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	68792408	68795360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_68792451_68793095_68793263_68794004_68794146_68795190
ENSMUSG00000060938.15_68792609_68795336_1	chr11	+	484	4	FSM	ENSMUSG00000060938.15	ENSMUST00000101014.9	657	4	173	0	148	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCATTAAAGACTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	68792608	68795336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_68792639_68793095_68793263_68794004_68794146_68795190
ENSMUSG00000060950.13_111644550_111649846_1	chr12	+	1630	4	FSM	ENSMUSG00000060950.13	ENSMUST00000168338.2	2131	4	11	490	11	-490	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTGCACAGGCCACGT	NA	NA	NA	NA	NA	NA	NA	NA	111644549	111649846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111644735_111645036_111645397_111647235_111647503_111649028
ENSMUSG00000060950.13_111644550_111649903_1	chr12	+	1687	4	FSM	ENSMUSG00000060950.13	ENSMUST00000168338.2	2131	4	11	433	11	-433	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	111644549	111649903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111644735_111645036_111645397_111647235_111647503_111649028
ENSMUSG00000060950.13_111644682_111649973_1	chr12	+	1625	4	FSM	ENSMUSG00000060950.13	ENSMUST00000168338.2	2131	4	143	363	143	-363	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCATCTGGGGTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	111644681	111649973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111644735_111645036_111645397_111647235_111647503_111649028
ENSMUSG00000060950.13_111645355_111650336_1	chr12	+	1617	3	FSM	ENSMUSG00000060950.13	ENSMUST00000084947.10	2433	3	816	0	816	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	111645354	111650336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111645397_111647235_111647503_111649028
ENSMUSG00000060992.10_103181328_103205038_1	chr15	+	245	4	ISM	ENSMUSG00000060992.10	ENST00000549116.5	380	7	-4	2130	1	-2130	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTCTCTGCCCTGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	103181327	103205038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_103181369_103197527_103197597_103203148_103203205_103204959
ENSMUSG00000060992.10_103181328_103207169_1	chr15	+	559	9	FSM	ENSMUSG00000060992.10	ENSMUST00000100162.5	1676	9	-9	1126	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTGAGCCCAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	103181327	103207169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
ENSMUSG00000060992.10_103197527_103207169_1	chr15	+	468	7	ISM	ENSMUSG00000060992.10	ENST00000552362.5	508	8	16200	-1	16188	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTGAGCCCAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	103197526	103207169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205201_103207119
ENSMUSG00000060992.10_103197527_103207169_2	chr15	+	519	8	ISM	ENSMUSG00000060992.10	ENSMUST00000100162.5	1676	9	16190	1126	16188	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTGAGCCCAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	103197526	103207169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
ENSMUSG00000060992.10_103199100_103207169_1	chr15	+	400	6	ISM	ENSMUSG00000060992.10	ENST00000552362.5	508	8	17773	-1	17761	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTGAGCCCAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	103199099	103207169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205201_103207119
ENSMUSG00000060992.10_103199785_103207343_1	chr15	+	512	6	ISM	ENSMUSG00000060992.10	ENST00000455864.6	817	8	18458	152	18446	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTGAGTCAGGGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	103199784	103207343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
ENSMUSG00000060992.10_103199796_103207389_1	chr15	+	550	5	NNC	ENSMUSG00000060992.10	novel	2438	8	NA	NA	18457	-106	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACCCCCCATTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	103199795	103207389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_103199848_103203148_103203205_103204959_103205038_103205160_103205225_103207089
ENSMUSG00000060992.10_103203147_103207495_1	chr15	+	603	5	ISM	ENSMUSG00000060992.10	ENST00000455864.6	817	8	21820	0	21808	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGCCCTCATCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	103203146	103207495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
ENSMUSG00000060992.10_103203147_103207495_2	chr15	+	606	4	NNC	ENSMUSG00000060992.10	novel	817	8	NA	NA	21808	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGCCCTCATCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	103203146	103207495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_103203205_103204959_103205038_103205160_103205225_103207089
ENSMUSG00000060992.10_103204958_103207169_1	chr15	+	221	4	ISM	ENSMUSG00000060992.10	ENST00000549116.5	380	7	23626	-1	23619	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTGAGCCCAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	103204957	103207169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_103205038_103205160_103205213_103206313_103206353_103207119
ENSMUSG00000061028.8_19314966_19325163_1	chr7	-	1615	14	ISM	ENSMUSG00000061028.8	ENST00000221455.8	2021	19	12061	-69	12061	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCACATGCTGTCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	19325163	19314965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19315102_19316152_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014
ENSMUSG00000061028.8_19315085_19319271_1	chr7	-	511	6	ISM	ENSMUSG00000061028.8	ENST00000544944.6	1964	18	17953	50	17953	-50	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCTCAAGGTCCAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	19319271	19315084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19315102_19316152_19316240_19318079_19318127_19318208_19318268_19318704_19318749_19319014
ENSMUSG00000061028.8_19316153_19325163_1	chr7	-	1483	13	NIC	ENSMUSG00000061028.8	novel	1835	18	NA	NA	12061	-1118	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCTCCACCCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	19325163	19316152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318704_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014
ENSMUSG00000061028.8_19316153_19326002_1	chr7	-	1568	14	NIC	ENSMUSG00000061028.8	novel	1835	18	NA	NA	11222	-1118	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	871	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCTCCACCCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	19326002	19316152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318704_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917
ENSMUSG00000061028.8_19316179_19320322_1	chr7	-	526	6	ISM	ENSMUSG00000061028.8	ENST00000544944.6	1964	18	16902	1144	16902	-1144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCGCCCTCCCCACGCTA	NA	NA	NA	NA	NA	NA	NA	NA	19320322	19316178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19316240_19318079_19318127_19318208_19318268_19318704_19318749_19319014_19319273_19320265
ENSMUSG00000061028.8_19318208_19328477_1	chr7	-	1515	13	NIC	ENSMUSG00000061028.8	novel	2021	19	NA	NA	8747	-3173	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGCTGTGCTCCTCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	19328477	19318207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_19318268_19318394_19318456_19318704_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397
ENSMUSG00000061028.8_19318395_19328933_1	chr7	-	1557	13	NIC	ENSMUSG00000061028.8	novel	2021	19	NA	NA	8291	-3360	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCCTGCCTCCAATCC	NA	NA	NA	NA	NA	NA	NA	NA	19328933	19318394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_19318456_19318704_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831
ENSMUSG00000061028.8_19319135_19337143_1	chr7	-	1459	13	ISM	ENSMUSG00000061028.8	ENST00000221455.8	2021	19	81	4100	81	-4100	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCGGAGCCGAAGCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	19337143	19319134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114
ENSMUSG00000061028.8_19319148_19337175_1	chr7	-	1478	13	ISM	ENSMUSG00000061028.8	ENST00000221455.8	2021	19	49	4113	49	-4113	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCGCAGCCAGAGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	19337175	19319147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114
ENSMUSG00000061028.8_19320306_19337134_1	chr7	-	1086	11	ISM	ENSMUSG00000061028.8	ENST00000391953.8	1835	18	90	5271	90	-5271	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCGGCGCGGCGGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	19337134	19320305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328465_19329454_19329482_19337114
ENSMUSG00000061028.8_19320371_19337176_1	chr7	-	1063	11	ISM	ENSMUSG00000061028.8	ENST00000391953.8	1835	18	48	5336	48	-5336	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCAGCCGCGGACGGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	19337176	19320370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328465_19329454_19329482_19337114
ENSMUSG00000061028.8_19320374_19337178_1	chr7	-	1052	10	NNC	ENSMUSG00000061028.8	novel	1964	18	NA	NA	46	-5339	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGCAGCCGCGGACGGC	NA	NA	NA	NA	NA	NA	NA	NA	19337178	19320373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19337110
ENSMUSG00000061028.8_19320427_19337224_1	chr7	-	1055	11	ISM	ENSMUSG00000061028.8	ENST00000391953.8	1835	18	0	5392	0	-5392	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGCTCCCGCTCCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	19337224	19320426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328465_19329454_19329482_19337114
ENSMUSG00000061032.10_78236218_78241315_1	chr10	-	1337	6	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	6009	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTCTCCCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78241315	78236217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_78236819_78237683_78237801_78238431_78238542_78239338_78239419_78240758_78241121_78241248
ENSMUSG00000061032.10_78236218_78241572_1	chr10	-	1516	8	ISM	ENSMUSG00000061032.10	ENSMUST00000062678.11	1984	13	7305	-2	5752	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTCTCCCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78241572	78236217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_78236819_78237683_78237801_78238258_78238279_78238443_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399
ENSMUSG00000061032.10_78236432_78244984_1	chr10	-	1334	9	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	2340	-212	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAACATTTCACTTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	78244984	78236431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_78236819_78237683_78237801_78238427_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967
ENSMUSG00000061032.10_78236556_78247263_1	chr10	-	1363	11	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	61	-336	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGGTTCTGAGCGTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	78247263	78236555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_78236819_78237683_78237801_78238427_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237
ENSMUSG00000061032.10_78236627_78247296_1	chr10	-	1325	11	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	28	-407	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACAGCCCAGGCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	78247296	78236626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_78236819_78237683_78237801_78238427_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237
ENSMUSG00000061032.10_78236658_78248702_1	chr10	-	1367	12	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	175	-438	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATACAGTCATCACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	78248702	78236657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_78236819_78237683_78237801_78238427_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
ENSMUSG00000061032.10_78236683_78248689_1	chr10	-	1333	13	FSM	ENSMUSG00000061032.10	ENSMUST00000062678.11	1984	13	188	463	188	-463	multi-exon	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGGGCCCAGCAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	78248689	78236682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_78236819_78237683_78237801_78238258_78238279_78238443_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
ENSMUSG00000061032.10_78236727_78248741_1	chr10	-	1341	13	FSM	ENSMUSG00000061032.10	ENSMUST00000062678.11	1984	13	136	507	136	-507	multi-exon	FALSE	canonical	NA	NA	NA	NA	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCTCCTGGGAAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	78248741	78236726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_78236819_78237683_78237801_78238258_78238279_78238443_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
ENSMUSG00000061032.10_78236778_78248824_1	chr10	-	1373	13	FSM	ENSMUSG00000061032.10	ENSMUST00000062678.11	1984	13	53	558	53	-558	multi-exon	FALSE	canonical	NA	NA	NA	NA	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGAGGAAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	78248824	78236777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_78236819_78237683_78237801_78238258_78238279_78238443_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
ENSMUSG00000061032.10_78238444_78247323_1	chr10	-	854	9	FSM	ENSMUSG00000061032.10	ENST00000497547.2	851	9	1	-4	1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCAGGAGGCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	78247323	78238443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_78238542_78239338_78239419_78240931_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237
ENSMUSG00000061032.10_78238444_78247323_2	chr10	-	853	9	NNC	ENSMUSG00000061032.10	novel	851	9	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCAGGAGGCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	78247323	78238443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_78238542_78239338_78239419_78240931_78241121_78241248_78241314_78241400_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237
ENSMUSG00000061046.10_26002514_26004279_1	chr17	-	843	7	ISM	ENSMUSG00000061046.10	ENSMUST00000150324.8	1267	8	33	715	33	-715	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGGAGCTCATGTACAAC	NA	NA	NA	NA	NA	NA	NA	NA	26004279	26002513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977
ENSMUSG00000061079.15_109660929_109685373_1	chr7	+	1169	11	ISM	ENSMUSG00000061079.15	ENST00000396597.7	1954	15	36	8241	0	-8241	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAGTTTGTATAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	109660928	109685373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109660983_109668690_109668810_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319
ENSMUSG00000061079.15_109668689_109693825_1	chr7	+	2167	15	ISM	ENSMUSG00000061079.15	ENSMUST00000211798.2	2631	16	7772	400	7760	-190	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTGACCACATGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	109668688	109693825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109668810_109669684_109669778_109670578_109670663_109671328_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ENSMUSG00000061079.15_109668739_109693881_1	chr7	+	2173	15	ISM	ENSMUSG00000061079.15	ENSMUST00000211798.2	2631	16	7822	344	7810	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTCAAGATGCGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	109668738	109693881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109668810_109669684_109669778_109670578_109670663_109671328_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ENSMUSG00000061079.15_109670576_109685547_1	chr7	+	1170	9	ISM	ENSMUSG00000061079.15	ENSMUST00000211798.2	2631	16	9659	8678	9647	-8067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGCTTTAACAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	109670575	109685547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109670663_109671328_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319
ENSMUSG00000061079.15_109673273_109694225_1	chr7	+	2190	11	ISM	ENSMUSG00000061079.15	ENSMUST00000211798.2	2631	16	12356	0	12344	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCAGCTTGTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	109673272	109694225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ENSMUSG00000061079.15_109673387_109691095_1	chr7	+	1163	9	ISM	ENSMUSG00000061079.15	ENST00000396597.7	1954	15	12494	2519	12458	-2519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTATGGTTACCGCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	109673386	109691095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971
ENSMUSG00000061079.15_109674846_109692310_1	chr7	+	1152	9	ISM	ENSMUSG00000061079.15	ENST00000396597.7	1954	15	13953	1304	13917	-1304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGCATCTTCAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	109674845	109692310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276
ENSMUSG00000061079.15_109674877_109694443_1	chr7	+	2180	10	ISM	ENSMUSG00000061079.15	ENSMUST00000169638.4	2914	15	13948	158	13948	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGGCTTATAGTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	109674876	109694443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ENSMUSG00000061079.15_109676338_109693542_1	chr7	+	1159	9	ISM	ENSMUSG00000061079.15	ENST00000396597.7	1954	15	15445	72	15409	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATCCAACAAGGGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	109676337	109693542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ENSMUSG00000061079.15_109679473_109693651_1	chr7	+	1224	8	ISM	ENSMUSG00000061079.15	ENST00000396597.7	1954	15	18580	-37	18544	37	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCCGGCAGAGCAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	109679472	109693651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ENSMUSG00000061111.9_120433992_120434501_1	chr11	-	222	2	ISM	ENSMUSG00000061111.9	ENST00000538396.5	796	4	1128	276	1128	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGAGTCGAATCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	120434501	120433991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120434185_120434472
ENSMUSG00000061111.9_120434139_120434833_2	chr11	-	540	2	ISM	ENSMUSG00000061111.9	ENSMUST00000034913.5	1205	5	5720	425	796	-412	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAATGACCAGAAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	120434833	120434138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120434575_120434729
ENSMUSG00000061111.9_120434139_120434833_3	chr11	-	539	2	NNC	ENSMUSG00000061111.9	novel	971	2	NA	NA	796	-412	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	748	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAATGACCAGAAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	120434833	120434138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_120434575_120434730
ENSMUSG00000061111.9_120434139_120435574_1	chr11	-	504	2	FSM	ENSMUSG00000061111.9	ENST00000573478.5	971	2	55	412	55	-412	multi-exon	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAATGACCAGAAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	120435574	120434138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120434575_120435506
ENSMUSG00000061111.9_120434409_120440553_1	chr11	-	510	5	FSM	ENSMUSG00000061111.9	ENSMUST00000034913.5	1205	5	0	695	0	-682	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCCGTGATCCCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	120440553	120434408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120434575_120434729_120434832_120435506_120435626_120435702_120435755_120440482
ENSMUSG00000061119.8_92524460_92583791_1	chr7	+	2961	9	NNC	ENSMUSG00000061119.8	novel	2967	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATTTATATTAATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	92524459	92583791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567029_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ENSMUSG00000061119.8_92524460_92583791_2	chr7	+	2962	9	NNC	ENSMUSG00000061119.8	novel	2967	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATTTATATTAATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	92524459	92583791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559520_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ENSMUSG00000061130.14_85265596_85321612_1	chr17	+	1134	5	FSM	ENSMUSG00000061130.14	ENST00000345249.8	1675	5	132	409	132	-409	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGAGAAGAAACCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	85265595	85321612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_85265823_85310693_85310812_85312339_85312452_85312936_85312995_85320993
ENSMUSG00000061130.14_85310691_85321729_1	chr17	+	1027	4	ISM	ENSMUSG00000061130.14	ENST00000345249.8	1675	5	45227	292	9583	-292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTTCCAAGGATGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	85310690	85321729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_85310812_85312339_85312452_85312936_85312995_85320993
ENSMUSG00000061130.14_85312379_85321939_1	chr17	+	1077	3	ISM	ENSMUSG00000061130.14	ENST00000345249.8	1675	5	46915	82	11271	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCTATTTACACATCACAA	NA	NA	NA	NA	NA	NA	NA	NA	85312378	85321939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_85312452_85312936_85312995_85320993
ENSMUSG00000061130.14_85312937_85322119_1	chr17	+	1184	2	ISM	ENSMUSG00000061130.14	ENSMUST00000080217.14	2670	6	47510	0	11829	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCACACTTTGGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	85312936	85322119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_85312995_85320993
ENSMUSG00000061132.14_40917371_40952727_1	chr19	-	1457	14	ISM	ENSMUSG00000061132.14	ENSMUST00000054769.7	2097	17	30251	0	29864	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTGATGCATTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	40952727	40917370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40917737_40922870_40923027_40924716_40924801_40926094_40926172_40927810_40927843_40928615_40928701_40931745_40931789_40932570_40932599_40933930_40934001_40939397_40939470_40940794_40940877_40948142_40948307_40950788_40950946_40952686
ENSMUSG00000061132.14_40917598_40982487_1	chr19	-	1379	17	FSM	ENSMUSG00000061132.14	ENSMUST00000054769.7	2097	17	491	227	104	-227	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCCTCTGTTTCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	40982487	40917597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_40917737_40922870_40923027_40924716_40924801_40926094_40926172_40927810_40927843_40928615_40928701_40931745_40931789_40932570_40932599_40933930_40934001_40939397_40939470_40940794_40940877_40948142_40948307_40950788_40950946_40952686_40952728_40956942_40956993_40961029_40961096_40982454
ENSMUSG00000061132.14_40917645_40982591_1	chr19	-	1436	17	FSM	ENSMUSG00000061132.14	ENSMUST00000054769.7	2097	17	387	274	0	-274	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAATATGCTGTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	40982591	40917644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_40917737_40922870_40923027_40924716_40924801_40926094_40926172_40927810_40927843_40928615_40928701_40931745_40931789_40932570_40932599_40933930_40934001_40939397_40939470_40940794_40940877_40948142_40948307_40950788_40950946_40952686_40952728_40956942_40956993_40961029_40961096_40982454
ENSMUSG00000061132.14_40917710_40982592_1	chr19	-	1372	17	FSM	ENSMUSG00000061132.14	ENSMUST00000054769.7	2097	17	386	339	-1	-339	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTCACCAGCACAACCC	NA	NA	NA	NA	NA	NA	NA	NA	40982592	40917709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_40917737_40922870_40923027_40924716_40924801_40926094_40926172_40927810_40927843_40928615_40928701_40931745_40931789_40932570_40932599_40933930_40934001_40939397_40939470_40940794_40940877_40948142_40948307_40950788_40950946_40952686_40952728_40956942_40956993_40961029_40961096_40982454
ENSMUSG00000061132.14_40924719_40982836_1	chr19	-	1431	15	ISM	ENSMUSG00000061132.14	ENSMUST00000054769.7	2097	17	142	7348	142	-7348	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTGGGACACCTAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	40982836	40924718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_40924801_40926094_40926172_40927810_40927843_40928615_40928701_40931745_40931789_40932570_40932599_40933930_40934001_40939397_40939470_40940794_40940877_40948142_40948307_40950788_40950946_40952686_40952728_40956942_40956993_40961029_40961096_40982454
ENSMUSG00000061136.17_53028250_53036131_1	chr2	-	1880	10	ISM	ENSMUSG00000061136.17	ENSMUST00000210789.3	3773	26	45165	0	45068	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTAGTCTTTATTTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	53036131	53028249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105
ENSMUSG00000061136.17_53028354_53036189_1	chr2	-	1834	10	ISM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	45010	-133	45010	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTTACTGAGAAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	53036189	53028353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105
ENSMUSG00000061136.17_53028487_53040783_1	chr2	-	1866	11	ISM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	40416	0	40416	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTGAGTAATAGTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	53040783	53028486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649
ENSMUSG00000061136.17_53028591_53041770_1	chr2	-	1842	12	ISM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	39429	104	39429	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTATTTTGAGGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	53041770	53028590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690
ENSMUSG00000061136.17_53028877_53043069_1	chr2	-	1836	14	ISM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	38130	390	38130	313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTTATAGAAGTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	53043069	53028876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969
ENSMUSG00000061136.17_53029027_53043528_1	chr2	-	1804	15	ISM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	37671	540	37671	163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTCTGTATCAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	53043528	53029026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475
ENSMUSG00000061136.17_53030472_53046894_1	chr2	-	1930	16	ISM	ENSMUSG00000061136.17	ENSMUST00000209364.3	3251	26	34820	1282	34305	-1282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTACTGAAAAGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	53046894	53030471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634
ENSMUSG00000061207.12_35042971_35043639_1	chr17	-	480	2	ISM	ENSMUSG00000061207.12	ENSMUST00000077477.12	1120	7	12282	2	12282	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCTTTCTGTGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	35043639	35042970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35043301_35043489
ENSMUSG00000061207.12_35043165_35051028_1	chr17	-	422	4	ISM	ENSMUSG00000061207.12	ENSMUST00000077477.12	1120	7	4893	196	4893	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCTGCTGCTGCAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	35051028	35043164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35043301_35043489_35043638_35043726_35043825_35050988
ENSMUSG00000061207.12_35043200_35051080_1	chr17	-	439	4	ISM	ENSMUSG00000061207.12	ENSMUST00000077477.12	1120	7	4841	231	4841	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGTGGCTGAGCAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	35051080	35043199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35043301_35043489_35043638_35043726_35043825_35050988
ENSMUSG00000061207.12_35043792_35055766_1	chr17	-	420	5	ISM	ENSMUSG00000061207.12	ENSMUST00000077477.12	1120	7	155	823	155	-823	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCTGGAAGCTGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	35055766	35043791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_35043825_35050988_35051129_35051421_35051518_35055405_35055543_35055752
ENSMUSG00000061232.17_34215323_34218912_2	chr17	-	1065	6	NNC	ENSMUSG00000061232.17	novel	1570	8	NA	NA	51	108	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAACTGTGGAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	34218912	34215322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_34215451_34215589_34215629_34215990_34216132_34216258_34216535_34218244_34218521_34218707
ENSMUSG00000061232.17_34215431_34219182_1	chr17	-	1049	8	FSM	ENSMUSG00000061232.17	ENSMUST00000172912.8	1570	8	81	440	49	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGACTTGGTGACAGACAA	NA	NA	NA	NA	NA	NA	NA	NA	34219182	34215430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34215451_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
ENSMUSG00000061232.17_34216032_34218848_1	chr17	-	782	4	FSM	ENSMUSG00000061232.17	ENST00000430151.2	895	4	115	-2	115	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAGAAGGAGAAACACAG	NA	NA	NA	NA	NA	NA	NA	NA	34218848	34216031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34216132_34216258_34216524_34218244_34218521_34218707
ENSMUSG00000061232.17_34216032_34218978_1	chr17	-	912	4	FSM	ENSMUSG00000061232.17	ENST00000430151.2	895	4	-15	-2	-15	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAGAAGGAGAAACACAG	NA	NA	NA	NA	NA	NA	NA	NA	34218978	34216031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34216132_34216258_34216524_34218244_34218521_34218707
ENSMUSG00000061273.4_55634270_55636464_1	chrX	-	421	2	ISM	ENSMUSG00000061273.4	ENST00000680510.1	825	3	6967	40	6965	-40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAAAGTCACTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55636464	55634269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_55634664_55636437
ENSMUSG00000061273.4_55634336_55636499_1	chrX	-	390	2	ISM	ENSMUSG00000061273.4	ENST00000680510.1	825	3	6932	106	6930	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTGAAATGAGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	55636499	55634335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_55634664_55636437
ENSMUSG00000061273.4_55634396_55636541_1	chrX	-	372	2	ISM	ENSMUSG00000061273.4	ENST00000680510.1	825	3	6890	166	6888	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTAATCTATGGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	55636541	55634395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_55634664_55636437
ENSMUSG00000061273.4_55634517_55643298_1	chrX	-	405	3	FSM	ENSMUSG00000061273.4	ENST00000680510.1	825	3	133	287	131	-287	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGCCGTTAAGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55643298	55634516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_55634664_55636437_55636542_55643144
ENSMUSG00000061286.8_25358637_25363826_1	chr7	+	361	3	ISM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	48	3631	21	-3631	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTCAATCACCGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	25358636	25363826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_25358809_25362561_25362676_25363751
ENSMUSG00000061286.8_25358770_25364906_1	chr7	+	336	4	ISM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	181	2551	154	-2551	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCCTCTTCTGTGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	25358769	25364906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_25358809_25362561_25362676_25363751_25363874_25364845
ENSMUSG00000061286.8_25362660_25365731_1	chr7	+	333	4	ISM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	4071	1726	4044	-1726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCACCACCAAGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	25362659	25365731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_25362676_25363751_25363874_25364845_25364987_25365677
ENSMUSG00000061286.8_25363812_25367177_1	chr7	+	346	4	ISM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	5223	280	5196	-280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCGGGAATCACTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	25363811	25367177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_25363874_25364845_25364987_25365677_25365768_25367124
ENSMUSG00000061306.17_119994786_120000318_1	chr11	-	2339	4	ISM	ENSMUSG00000061306.17	ENSMUST00000103018.11	4578	17	41854	0	41820	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCATGTATGTGTATTA	NA	NA	NA	NA	NA	NA	NA	NA	120000318	119994785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119996863_119997259_119997437_119999292_119999317_120000257
ENSMUSG00000061306.17_119994888_120000928_1	chr11	-	2322	4	NNC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	41210	-102	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACCAGGAGCCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	120000928	119994887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_119996863_119997259_119997465_120000257_120000363_120000891
ENSMUSG00000061306.17_119995123_120001154_1	chr11	-	2309	5	ISM	ENSMUSG00000061306.17	ENSMUST00000103018.11	4578	17	41018	337	40984	155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTGAGTACAGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	120001154	119995122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119996863_119997259_119997437_119999292_119999317_120000257_120000363_120000891
ENSMUSG00000061306.17_119995278_120001679_1	chr11	-	2378	6	ISM	ENSMUSG00000061306.17	ENSMUST00000103018.11	4578	17	40493	492	40459	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	120001679	119995277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119996863_119997259_119997437_119999292_119999317_120000257_120000363_120000891_120001363_120001663
ENSMUSG00000061306.17_119995399_120001728_1	chr11	-	2306	6	ISM	ENSMUSG00000061306.17	ENSMUST00000103018.11	4578	17	40444	613	40410	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGGGTGGGGGGTATGAC	NA	NA	NA	NA	NA	NA	NA	NA	120001728	119995398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119996863_119997259_119997437_119999292_119999317_120000257_120000363_120000891_120001363_120001663
ENSMUSG00000061306.17_119995480_120001802_1	chr11	-	2299	6	ISM	ENSMUSG00000061306.17	ENSMUST00000103018.11	4578	17	40370	694	40336	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAACCTGTGACAGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	120001802	119995479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119996863_119997259_119997437_119999292_119999317_120000257_120000363_120000891_120001363_120001663
ENSMUSG00000061306.17_119996102_120025700_1	chr11	-	2360	11	ISM	ENSMUSG00000061306.17	ENSMUST00000103018.11	4578	17	16472	1316	16438	-824	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGGGTCAGAAGCCAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	120025700	119996101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119996863_119997259_119997437_119999292_119999317_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605
ENSMUSG00000061306.17_119996504_120031493_1	chr11	-	2310	14	ISM	ENSMUSG00000061306.17	ENSMUST00000103018.11	4578	17	10679	1718	10645	-1226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGTCCAGAGAAGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	120031493	119996503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119996863_119997259_119997437_119999292_119999317_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418
ENSMUSG00000061306.17_119997329_120042105_1	chr11	-	2365	16	ISM	ENSMUSG00000061306.17	ENSMUST00000103018.11	4578	17	67	2543	33	-2051	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTGAGGAGCAGCACAAG	NA	NA	NA	NA	NA	NA	NA	NA	120042105	119997328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_119997437_119999292_119999317_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ENSMUSG00000061313.11_26118851_26226067_1	chr8	-	784	7	NNC	ENSMUSG00000061313.11	novel	712	6	NA	NA	0	96522	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATCAAGCCAGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	26226067	26118850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_26118923_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225119_26225771_26225928_26226033
ENSMUSG00000061313.11_26215373_26217728_1	chr8	-	2090	2	ISM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	26580	0	8339	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTGGCCTTATCTATC	NA	NA	NA	NA	NA	NA	NA	NA	26217728	26215372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26217391_26217656
ENSMUSG00000061313.11_26215503_26223034_1	chr8	-	2041	3	ISM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	21274	130	3033	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAAGGGACGATGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	26223034	26215502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26217391_26217656_26217765_26222989
ENSMUSG00000061313.11_26215562_26223100_1	chr8	-	2048	3	ISM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	21208	189	2967	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCATTCTGTCTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	26223100	26215561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26217391_26217656_26217765_26222989
ENSMUSG00000061313.11_26215669_26224792_1	chr8	-	2040	4	ISM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	19516	296	1275	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATACAAGGCAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	26224792	26215668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742
ENSMUSG00000061313.11_26215823_26225055_1	chr8	-	2027	5	ISM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	19253	450	1012	-450	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTCATTACTACTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	26225055	26215822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035
ENSMUSG00000061313.11_26215964_26225838_1	chr8	-	2036	6	ISM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	18470	591	229	-591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCCAGGTATATGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	26225838	26215963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771
ENSMUSG00000061313.11_26216540_26231749_1	chr8	-	2042	11	ISM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	12559	1167	-5682	805	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGGCTGGCCTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	26231749	26216539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627
ENSMUSG00000061313.11_26216685_26236882_1	chr8	-	2022	12	ISM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	7426	1312	7426	660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTAGTAGCACCGATT	NA	NA	NA	NA	NA	NA	NA	NA	26236882	26216684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844
ENSMUSG00000061313.11_26216830_26238615_1	chr8	-	2026	13	ISM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	5693	1457	5693	515	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGGTTGTATTAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	26238615	26216829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564
ENSMUSG00000061313.11_26217345_26243052_1	chr8	-	2030	17	ISM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	1256	1972	1256	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTTCCTTCTCAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	26243052	26217344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974
ENSMUSG00000061313.11_26217657_26226067_1	chr8	-	705	6	NNC	ENSMUSG00000061313.11	novel	712	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTTCAATGCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	26226067	26217656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_26217765_26222989_26223150_26224742_26224907_26225035_26225119_26225771_26225928_26226033
ENSMUSG00000061313.11_26217657_26226067_4	chr8	-	712	6	FSM	ENSMUSG00000061313.11	ENST00000529845.5	712	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTTCAATGCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	26226067	26217656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_26217765_26222989_26223150_26224742_26224914_26225035_26225119_26225771_26225928_26226033
ENSMUSG00000061315.15_127871504_127884176_1	chr10	+	617	7	NNC	ENSMUSG00000061315.15	novel	6745	9	NA	NA	0	-326	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3134	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAAAGGCTGTTCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	127871503	127884176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883874_127883997_127884113
ENSMUSG00000061315.15_127871504_127884236_1	chr10	+	684	7	ISM	ENSMUSG00000061315.15	ENSMUST00000073868.9	885	8	60	266	0	-266	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5561	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGCCCATCAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	127871503	127884236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113
ENSMUSG00000061315.15_127872358_127883998_1	chr10	+	502	5	ISM	ENSMUSG00000061315.15	ENST00000679092.1	864	8	880	529	854	-504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCACGGAATCTTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	127872357	127883998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127872430_127882048_127882123_127882597_127882676_127883526_127883674_127883867
ENSMUSG00000061315.15_127872358_127884506_1	chr10	+	780	7	ISM	ENSMUSG00000061315.15	ENSMUST00000073868.9	885	8	914	-4	854	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGCTAGATCTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	127872357	127884506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ENSMUSG00000061315.15_127882035_127884506_1	chr10	+	710	6	ISM	ENSMUSG00000061315.15	ENSMUST00000092048.13	6745	9	10531	0	10531	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8865	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGCTAGATCTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	127882034	127884506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ENSMUSG00000061315.15_127882035_127884506_2	chr10	+	703	6	NNC	ENSMUSG00000061315.15	novel	6745	9	NA	NA	10531	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2805	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGCTAGATCTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	127882034	127884506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_127882123_127882597_127882676_127883526_127883674_127883874_127883997_127884113_127884237_127884361
ENSMUSG00000061353.12_117145652_117150559_1	chr6	+	251	3	FSM	ENSMUSG00000061353.12	ENSMUST00000112866.8	1878	3	156	1471	114	-1471	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTCCAGTAGACCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	117145651	117150559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_117145678_117148442_117148561_117150452
ENSMUSG00000061374.15_5010558_5015876_1	chr7	-	1847	2	ISM	ENSMUSG00000061374.15	ENSMUST00000208944.2	2306	3	361	284	361	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTACTGAAAGAAGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	5015876	5010557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_5012205_5015676
ENSMUSG00000061374.15_5010688_5015960_1	chr7	-	1801	2	ISM	ENSMUSG00000061374.15	ENSMUST00000208944.2	2306	3	277	414	277	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTAGAGAATGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	5015960	5010687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_5012205_5015676
ENSMUSG00000061374.15_5010800_5017676_1	chr7	-	1803	3	FSM	ENSMUSG00000061374.15	ENSMUST00000077385.15	2546	3	1	742	1	-242	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGACTGGGTACATAGT	NA	NA	NA	NA	NA	NA	NA	NA	5017676	5010799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_5012205_5015676_5016022_5017623
ENSMUSG00000061436.16_38674819_38722687_1	chr6	-	2409	11	ISM	ENSMUSG00000061436.16	ENST00000428878.6	3884	15	130214	-20	73559	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAATGTTAGTAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	38722687	38674818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38675532_38676186_38676344_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598
ENSMUSG00000061436.16_38674985_38724846_1	chr6	-	2399	13	ISM	ENSMUSG00000061436.16	ENST00000428878.6	3884	15	128055	146	71400	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAAACAATGCAATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	38724846	38674984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38675532_38676186_38676344_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808
ENSMUSG00000061436.16_38675049_38724894_1	chr6	-	2383	13	ISM	ENSMUSG00000061436.16	ENST00000428878.6	3884	15	128007	210	71352	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGAGGGTGGAGGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	38724894	38675048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38675532_38676186_38676344_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808
ENSMUSG00000061436.16_38675160_38795281_1	chr6	-	2427	14	ISM	ENSMUSG00000061436.16	ENST00000428878.6	3884	15	57620	321	965	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACCTATATCAGCGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	38795281	38675159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38675532_38676186_38676344_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38675328_38795438_1	chr6	-	2416	14	ISM	ENSMUSG00000061436.16	ENST00000428878.6	3884	15	57463	489	808	-489	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGCACTGTAGCCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	38795438	38675327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38675532_38676186_38676344_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38675405_38795532_1	chr6	-	2433	14	ISM	ENSMUSG00000061436.16	ENST00000428878.6	3884	15	57369	566	714	-566	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACCTGGCTGCGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	38795532	38675404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38675532_38676186_38676344_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38676242_38795650_1	chr6	-	2369	13	ISM	ENSMUSG00000061436.16	ENST00000428878.6	3884	15	57251	1403	596	-1403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCAGCGGCCAGGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	38795650	38676241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38676344_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38676283_38795712_1	chr6	-	2390	13	ISM	ENSMUSG00000061436.16	ENST00000428878.6	3884	15	57189	1444	534	-1444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACTCTTCAGGGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	38795712	38676282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38676344_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38680363_38795598_1	chr6	-	2007	11	FSM	ENSMUSG00000061436.16	ENST00000342645.7	2658	11	648	3	648	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGCACAGCCATGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	38795598	38680362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_38680622_38695706_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38680363_38795691_1	chr6	-	2093	11	NNC	ENSMUSG00000061436.16	novel	2658	11	NA	NA	555	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGCACAGCCATGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	38795691	38680362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_38680622_38695713_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38680364_38795691_1	chr6	-	2105	11	NNC	ENSMUSG00000061436.16	novel	2658	11	NA	NA	555	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACAGCACAGCCATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	38795691	38680363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_38680622_38695700_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38680372_38795695_1	chr6	-	2095	11	FSM	ENSMUSG00000061436.16	ENST00000342645.7	2658	11	551	12	551	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGGGACCACAGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	38795695	38680371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_38680622_38695706_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38680391_38795721_1	chr6	-	2103	11	NNC	ENSMUSG00000061436.16	novel	2658	11	NA	NA	525	-31	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGCCTAGGGCCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	38795721	38680390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_38680617_38695700_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38680428_38795818_1	chr6	-	2378	12	ISM	ENSMUSG00000061436.16	ENSMUST00000160962.8	3972	15	18341	5613	428	-68	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAAGACCCAGGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	38795818	38680427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38680622_38692874_38693157_38695688_38695869_38698389_38698530_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38680434_38795770_1	chr6	-	2114	11	NNC	ENSMUSG00000061436.16	novel	2658	11	NA	NA	476	-74	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCCCACTGAAGACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	38795770	38680433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_38680622_38695700_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38680435_38795764_1	chr6	-	2101	11	FSM	ENSMUSG00000061436.16	ENST00000342645.7	2658	11	482	75	482	-75	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCCCCACTGAAGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	38795764	38680434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_38680622_38695706_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38680469_38795800_1	chr6	-	2104	11	NNC	ENSMUSG00000061436.16	novel	2658	11	NA	NA	446	-109	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCACTGCACTGGCAACC	NA	NA	NA	NA	NA	NA	NA	NA	38795800	38680468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_38680617_38695700_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38680511_38795912_1	chr6	-	2389	12	ISM	ENSMUSG00000061436.16	ENSMUST00000160962.8	3972	15	18247	5696	334	-151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAACGGCACCAACACCT	NA	NA	NA	NA	NA	NA	NA	NA	38795912	38680510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38680622_38692874_38693157_38695688_38695869_38698389_38698530_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38680545_38795988_1	chr6	-	2431	12	ISM	ENSMUSG00000061436.16	ENSMUST00000160962.8	3972	15	18171	5730	258	-185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCAGCCCCTACTCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	38795988	38680544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38680622_38692874_38693157_38695688_38695869_38698389_38698530_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38693037_38796186_1	chr6	-	2390	11	ISM	ENSMUSG00000061436.16	ENSMUST00000160962.8	3972	15	17973	18222	60	-12677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCAGTCACCTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	38796186	38693036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38693157_38695688_38695869_38698389_38698530_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38695707_38852857_1	chr6	-	2439	11	ISM	ENSMUSG00000061436.16	ENSMUST00000160360.2	3907	15	48	20883	0	-15347	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCAGTCATCTGTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	38852857	38695706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38695869_38698389_38698530_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
ENSMUSG00000061436.16_38695728_38796001_1	chr6	-	2130	10	ISM	ENSMUSG00000061436.16	ENST00000342645.7	2658	11	245	15368	245	-15368	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTCCAGGAAGAGTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	38796001	38695727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38695779_38796051_1	chr6	-	2129	10	ISM	ENSMUSG00000061436.16	ENST00000342645.7	2658	11	195	15419	195	-15419	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAATGTGGGTGTAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	38796051	38695778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_38695838_38796093_1	chr6	-	2112	10	ISM	ENSMUSG00000061436.16	ENST00000342645.7	2658	11	153	15478	153	-15478	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATCATGCAGCAGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	38796093	38695837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061455.14_48131763_48186507_1	chr4	+	5739	7	ISM	ENSMUSG00000061455.14	ENSMUST00000107720.9	5770	8	6837	0	6828	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATTCCTGTTGTATATT	NA	NA	NA	NA	NA	NA	NA	NA	48131762	48186507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
ENSMUSG00000061458.10_17398574_17466922_1	chr12	+	1632	18	ISM	ENSMUSG00000061458.10	ENST00000345985.7	1914	20	19	12313	19	-12313	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCTTCAAAGAGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	17398573	17466922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714
ENSMUSG00000061458.10_17400515_17474753_1	chr12	+	1730	18	ISM	ENSMUSG00000061458.10	ENST00000345985.7	1914	20	1960	4482	1960	-4482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGTTCCATGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	17400514	17474753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650
ENSMUSG00000061458.10_17402641_17474753_1	chr12	+	1676	17	NNC	ENSMUSG00000061458.10	novel	1914	20	NA	NA	4086	-4482	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1198	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGTTCCATGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	17402640	17474753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412602_17412682_17418309_17418389_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650
ENSMUSG00000061458.10_17402641_17474753_2	chr12	+	1682	17	NNC	ENSMUSG00000061458.10	novel	1914	20	NA	NA	4086	-4482	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1957	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGTTCCATGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	17402640	17474753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474651
ENSMUSG00000061458.10_17402641_17474753_3	chr12	+	1683	17	ISM	ENSMUSG00000061458.10	ENST00000345985.7	1914	20	4086	4482	4086	-4482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2637	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGTTCCATGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	17402640	17474753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650
ENSMUSG00000061458.10_17402641_17474753_4	chr12	+	1681	17	NNC	ENSMUSG00000061458.10	novel	1914	20	NA	NA	4086	-4482	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGTTCCATGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	17402640	17474753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466030_17466200_17466714_17466963_17474650
ENSMUSG00000061458.10_17402688_17479132_1	chr12	+	1653	18	ISM	ENSMUSG00000061458.10	ENST00000345985.7	1914	20	4133	103	4133	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1879	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACAGGAGGCTGAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	17402687	17479132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ENSMUSG00000061458.10_17405237_17479235_1	chr12	+	1704	17	ISM	ENSMUSG00000061458.10	ENST00000345985.7	1914	20	6682	0	6682	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGAAATGTGCCCACGA	NA	NA	NA	NA	NA	NA	NA	NA	17405236	17479235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ENSMUSG00000061458.10_17406920_17479235_1	chr12	+	1623	16	NNC	ENSMUSG00000061458.10	novel	1914	20	NA	NA	8365	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2493	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGAAATGTGCCCACGA	NA	NA	NA	NA	NA	NA	NA	NA	17406919	17479235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466718_17466963_17474650_17474754_17479115
ENSMUSG00000061458.10_17408101_17479235_1	chr12	+	1588	15	NNC	ENSMUSG00000061458.10	novel	1914	20	NA	NA	9546	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2114	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGAAATGTGCCCACGA	NA	NA	NA	NA	NA	NA	NA	NA	17408100	17479235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456808_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ENSMUSG00000061462.19_58972814_58981562_1	chr11	-	852	4	ISM	ENSMUSG00000061462.19	ENST00000366704.2	8959	33	45627	37181	45627	-37181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTGTCCCCCAGCGATGC	NA	NA	NA	NA	NA	NA	NA	NA	58981562	58972813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_58972891_58973017_58973285_58973442_58973722_58981333
ENSMUSG00000061462.19_59019035_59022558_1	chr11	-	837	4	ISM	ENSMUSG00000061462.19	ENST00000366704.2	8959	33	4631	83402	4631	-83402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGAGCTCCAGCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	59022558	59019034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59019165_59020395_59020672_59021244_59021490_59022372
ENSMUSG00000061462.19_59020553_59023490_1	chr11	-	850	4	ISM	ENSMUSG00000061462.19	ENST00000366704.2	8959	33	3699	84920	3699	-84920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATGGGAAGAAGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	59023490	59020552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_59020672_59021244_59021490_59022372_59022655_59023286
ENSMUSG00000061474.12_100872463_100875581_1	chr13	-	379	2	ISM	ENSMUSG00000061474.12	ENSMUST00000109333.8	701	4	5586	0	5584	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	100875581	100872462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100872782_100875521
ENSMUSG00000061474.12_100872688_100881096_1	chr13	-	405	4	FSM	ENSMUSG00000061474.12	ENSMUST00000109333.8	701	4	71	225	69	-103	multi-exon	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCATATATTAAACAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	100881096	100872687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037
ENSMUSG00000061477.5_28680853_28685489_1	chr12	-	765	5	NNC	ENSMUSG00000061477.5	novel	954	7	NA	NA	367	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTATGTCCTATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	28685489	28680852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684342_28685414
ENSMUSG00000061477.5_28680853_28685489_2	chr12	-	770	5	NNC	ENSMUSG00000061477.5	novel	954	7	NA	NA	367	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTATGTCCTATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	28685489	28680852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_28681193_28681622_28681774_28683766_28683827_28684207_28684352_28685414
ENSMUSG00000061477.5_28680853_28685695_1	chr12	-	889	6	FSM	ENSMUSG00000061477.5	ENSMUST00000221871.2	820	6	161	-230	161	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTATGTCCTATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	28685695	28680852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578
ENSMUSG00000061477.5_28680960_28685856_1	chr12	-	751	7	FSM	ENSMUSG00000061477.5	ENSMUST00000074267.5	954	7	96	107	0	-107	multi-exon	TRUE	canonical	NA	NA	NA	NA	7738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATATGGGGGCATTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	28685856	28680959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854
ENSMUSG00000061477.5_28680960_28685856_2	chr12	-	748	7	NNC	ENSMUSG00000061477.5	novel	820	6	NA	NA	0	-107	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATATGGGGGCATTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	28685856	28680959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685656_28685850
ENSMUSG00000061477.5_28681082_28685952_1	chr12	-	720	7	NNC	ENSMUSG00000061477.5	novel	954	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	28685952	28681081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685859
ENSMUSG00000061479.16_26886432_26895670_1	chr7	-	1330	7	NNC	ENSMUSG00000061479.16	novel	1336	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	26895670	26886431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_26886790_26888290_26888380_26888783_26888958_26891034_26891206_26892294_26892468_26894868_26894982_26895418
ENSMUSG00000061479.16_26886432_26895670_2	chr7	-	1328	7	NNC	ENSMUSG00000061479.16	novel	1336	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	26895670	26886431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892460_26894868_26894982_26895418
ENSMUSG00000061479.16_26888784_26895670_1	chr7	-	889	5	ISM	ENSMUSG00000061479.16	ENSMUST00000122202.8	1336	7	0	2352	0	-2352	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGCCCCTGCCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	26895670	26888783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895418
ENSMUSG00000061518.12_36730565_36732762_1	chr1	+	859	4	NNC	ENSMUSG00000061518.12	novel	865	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGCTAAAAATTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	36730564	36732762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_36730771_36731291_36731366_36731531_36731632_36732283
ENSMUSG00000061518.12_36730691_36732762_1	chr1	+	739	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	126	0	126	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGCTAAAAATTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	36730690	36732762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
ENSMUSG00000061533.17_91256283_91314421_1	chr12	-	828	8	NNC	ENSMUSG00000061533.17	novel	1445	13	NA	NA	36690	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGGCCGCACAGATCGAG	NA	NA	NA	NA	NA	NA	NA	NA	91314421	91256282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_91256415_91260807_91260934_91262972_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299
ENSMUSG00000061533.17_91256283_91314421_2	chr12	-	831	8	ISM	ENSMUSG00000061533.17	ENST00000216517.10	1445	13	36690	-1	36690	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGGCCGCACAGATCGAG	NA	NA	NA	NA	NA	NA	NA	NA	91314421	91256282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299
ENSMUSG00000061533.17_91256348_91315560_1	chr12	-	797	9	ISM	ENSMUSG00000061533.17	ENST00000216517.10	1445	13	35551	64	35551	-64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGGCTTCGGAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	91315560	91256347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523
ENSMUSG00000061533.17_91260807_91315650_1	chr12	-	821	8	ISM	ENSMUSG00000061533.17	ENST00000216517.10	1445	13	35461	4523	35461	-4523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACCTGGATACTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	91315650	91260806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523
ENSMUSG00000061533.17_91260902_91331150_1	chr12	-	743	9	ISM	ENSMUSG00000061533.17	ENST00000216517.10	1445	13	19961	4618	19961	-4618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAAGGGGTTTGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	91331150	91260901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133
ENSMUSG00000061533.17_91263028_91333160_1	chr12	-	767	9	ISM	ENSMUSG00000061533.17	ENST00000216517.10	1445	13	17951	6744	17951	-6744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGCTGCTGAGTCAATC	NA	NA	NA	NA	NA	NA	NA	NA	91333160	91263027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116
ENSMUSG00000061533.17_91265765_91333278_1	chr12	-	861	8	ISM	ENSMUSG00000061533.17	ENST00000216517.10	1445	13	17833	9481	17833	-9481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	859	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATCTTGAAAGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	91333278	91265764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116
ENSMUSG00000061533.17_91292355_91348479_1	chr12	-	766	8	ISM	ENSMUSG00000061533.17	ENST00000216517.10	1445	13	2632	36071	2632	-36071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAAAGAGAGCTGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	91348479	91292354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91348421
ENSMUSG00000061533.17_91305831_91351127_1	chr12	-	847	7	ISM	ENSMUSG00000061533.17	ENST00000216517.10	1445	13	-16	49547	-16	-49547	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGGGTCAGGGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	91351127	91305830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91348421_91348563_91351007
ENSMUSG00000061536.14_121513037_121522108_1	chr9	-	1386	5	ISM	ENSMUSG00000061536.14	ENSMUST00000111560.10	2669	7	11987	937	11917	-937	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTACGTATGGATTAATA	NA	NA	NA	NA	NA	NA	NA	NA	121522108	121513036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121521975
ENSMUSG00000061559.16_54624443_54630134_1	chr9	-	466	4	ISM	ENSMUSG00000061559.16	ENSMUST00000130368.8	1162	11	11647	0	11632	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATTTGTGAACGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	54630134	54624442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117
ENSMUSG00000061559.16_54624641_54631393_1	chr9	-	404	5	ISM	ENSMUSG00000061559.16	ENSMUST00000130368.8	1162	11	10388	198	10373	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAATTTAAACACCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	54631393	54624640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334
ENSMUSG00000061613.14_31866055_31877770_1	chr17	-	944	8	NNC	ENSMUSG00000061613.14	novel	1046	8	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	31877770	31866054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867646_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ENSMUSG00000061613.14_31866055_31877770_2	chr17	-	944	8	NNC	ENSMUSG00000061613.14	novel	1046	8	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	31877770	31866054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_31866324_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ENSMUSG00000061613.14_31866055_31877866_1	chr17	-	1040	8	NNC	ENSMUSG00000061613.14	novel	1046	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3017	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	31877866	31866054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867646_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ENSMUSG00000061613.14_31866224_31877866_1	chr17	-	877	8	FSM	ENSMUSG00000061613.14	ENSMUST00000014684.6	1046	8	0	169	0	-169	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCGGTCAAGAGACCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	31877866	31866223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ENSMUSG00000061613.14_31867686_31877688_1	chr17	-	321	5	ISM	ENSMUSG00000061613.14	ENSMUST00000166526.9	923	8	55	1631	55	-1631	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGACAACCTAGGGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	31877688	31867685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_31867740_31867818_31867869_31871475_31871543_31873952_31874041_31877626
ENSMUSG00000061650.7_59839032_59853031_1	chr11	+	1910	2	NNC	ENSMUSG00000061650.7	novel	1920	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATGGTTTGCCTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	59839031	59853031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_59839305_59851394
ENSMUSG00000061666.7_86925902_86932666_1	chr11	-	385	4	ISM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	32222	1209	32222	-1209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAAAGGTTTAATCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	86932666	86925901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86926122_86926417_86926470_86928656_86928717_86932613
ENSMUSG00000061666.7_86926039_86936023_1	chr11	-	400	5	ISM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	28865	1346	28865	-1346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGCTTAAGGATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	86936023	86926038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86926122_86926417_86926470_86928656_86928717_86932613_86932748_86935952
ENSMUSG00000061666.7_86926442_86936666_1	chr11	-	397	5	ISM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	28222	1749	28222	-1749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCACCGCCCGGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	86936666	86926441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86926470_86928656_86928717_86932613_86932748_86935952_86936043_86936581
ENSMUSG00000061666.7_86932655_86950300_1	chr11	-	398	5	ISM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	14588	7962	14588	-7962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGTTCTTTGAAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	86950300	86932654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86932748_86935952_86936043_86936581_86936701_86947617_86947664_86950250
ENSMUSG00000061666.7_86936580_86964687_1	chr11	-	372	5	ISM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	201	11887	201	-11887	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGGGCACTGCCTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	86964687	86936579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86936701_86947617_86947664_86950250_86950387_86954724_86954768_86964661
ENSMUSG00000061666.7_86936625_86964749_1	chr11	-	389	5	ISM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	139	11932	139	-11932	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACATCGACATCAAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	86964749	86936624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_86936701_86947617_86947664_86950250_86950387_86954724_86954768_86964661
ENSMUSG00000061689.16_156562951_156604837_1	chr2	+	1402	7	FSM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	-14	207	-14	14	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCACTCAATTTGAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	156562950	156604837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ENSMUSG00000061689.16_156587754_156604837_2	chr2	+	1346	6	ISM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	24789	207	24342	14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCACTCAATTTGAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	156587753	156604837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ENSMUSG00000061742.13_6586766_6592741_1	chr19	-	1403	8	FSM	ENSMUSG00000061742.13	ENST00000473690.5	1340	8	-63	0	43	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGAGCCGCCTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	6592741	6586765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6586971_6587146_6587256_6587667_6587883_6588446_6588563_6588705_6588830_6590358_6590528_6591089_6591194_6592380
ENSMUSG00000061742.13_6587767_6592457_1	chr19	-	537	5	ISM	ENSMUSG00000061742.13	ENST00000377567.6	1277	7	327	1001	221	-1001	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGCTGATCAGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	6592457	6587766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6587883_6588446_6588563_6588705_6588830_6591089_6591194_6592380
ENSMUSG00000061742.13_6587767_6592533_1	chr19	-	613	5	ISM	ENSMUSG00000061742.13	ENST00000377567.6	1277	7	251	1001	145	-1001	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGCTGATCAGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	6592533	6587766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6587883_6588446_6588563_6588705_6588830_6591089_6591194_6592380
ENSMUSG00000061751.17_33848358_33853886_1	chr16	-	488	4	ISM	ENSMUSG00000061751.17	ENST00000682363.1	2982	15	62444	14795	62444	-14795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGCAGGACATCAACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	33853886	33848357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_33848480_33849009_33849196_33851923_33852002_33853784
ENSMUSG00000061751.17_33972631_34019621_1	chr16	-	2662	11	ISM	ENSMUSG00000061751.17	ENST00000684374.1	4783	24	63605	0	-35972	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTTACTGTGAGAAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	34019621	33972630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_33974212_33991641_33991745_33994754_33994898_33996098_33996201_33996636_33996828_33998665_33998778_34003027_34003121_34007784_34007875_34010037_34010108_34018762_34018873_34019554
ENSMUSG00000061751.17_33973467_34038286_1	chr16	-	2603	17	ISM	ENSMUSG00000061751.17	ENST00000684374.1	4783	24	44940	836	44923	303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCGCATCAGGCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	34038286	33973466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_33974212_33991641_33991745_33994754_33994898_33996098_33996201_33996636_33996828_33998665_33998778_34003027_34003121_34007784_34007875_34010037_34010108_34018762_34018873_34019554_34019622_34024230_34024350_34025517_34025701_34032527_34032651_34033160_34033277_34035384_34035500_34038165
ENSMUSG00000061751.17_33973770_34047493_1	chr16	-	2645	19	ISM	ENSMUSG00000061751.17	ENST00000684374.1	4783	24	35733	1139	35716	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCACCGTTGGGACCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	34047493	33973769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_33974212_33991641_33991745_33994754_33994898_33996098_33996201_33996636_33996828_33998665_33998778_34003027_34003121_34007784_34007875_34010037_34010108_34018762_34018873_34019554_34019622_34024230_34024350_34025517_34025701_34032527_34032651_34033160_34033277_34035384_34035500_34038165_34038316_34040425_34040645_34047396
ENSMUSG00000061751.17_33998690_34083209_1	chr16	-	2622	19	ISM	ENSMUSG00000061751.17	ENST00000684374.1	4783	24	17	26059	0	-339	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCATGTCAGCATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	34083209	33998689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_33998778_34003027_34003121_34007784_34007875_34010037_34010108_34018762_34018873_34019554_34019622_34024230_34024350_34025517_34025701_34032527_34032651_34033160_34033277_34035384_34035500_34038165_34038316_34040425_34040645_34047396_34047517_34055614_34055782_34064140_34064337_34072594_34072770_34076521_34076731_34082997
ENSMUSG00000061759.16_4382513_4403753_1	chr10	+	995	5	FSM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	46	1388	0	-1387	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAAGCATCCCATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	4382512	4403753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4403471
ENSMUSG00000061759.16_4382620_4403812_1	chr10	+	947	5	FSM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	153	1329	0	-1328	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCACATGAAGAGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	4382619	4403812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4403471
ENSMUSG00000061759.16_4382640_4403842_1	chr10	+	957	5	FSM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	173	1299	20	-1298	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCCACCTGTGGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	4382639	4403842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4403471
ENSMUSG00000061759.16_4384827_4403958_1	chr10	+	1002	4	ISM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	2360	1183	2207	-1182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTTATACGCTGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	4384826	4403958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_4384934_4389491_4389737_4400646_4400810_4403471
ENSMUSG00000061759.16_4400645_4404174_1	chr10	+	868	2	ISM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	18178	967	18025	-966	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATCCCCACTGGCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	4400644	4404174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_4400810_4403471
ENSMUSG00000061787.16_80992488_80994123_1	chr7	-	241	3	ISM	ENSMUSG00000061787.16	ENSMUST00000080813.5	494	5	879	7	879	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1620	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAGTTTGTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	80994123	80992487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80992598_80993482_80993549_80994058
ENSMUSG00000061787.16_80992488_80994137_1	chr7	-	248	3	NNC	ENSMUSG00000061787.16	novel	494	5	NA	NA	865	-7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAGTTTGTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	80994137	80992487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_80992598_80993482_80993542_80994058
ENSMUSG00000061787.16_80993513_80994679_1	chr7	-	217	3	ISM	ENSMUSG00000061787.16	ENSMUST00000080813.5	494	5	323	1032	323	-1032	internal_fragment	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGACACCAAGGAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	80994679	80993512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_80993549_80994058_80994165_80994604
ENSMUSG00000061787.16_80993520_80994669_1	chr7	-	193	3	NNC	ENSMUSG00000061787.16	novel	494	5	NA	NA	333	-1039	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGATCCCGACACCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	80994669	80993519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_80993542_80994058_80994165_80994604
ENSMUSG00000061787.16_80994057_80994757_1	chr7	-	260	2	NNC	ENSMUSG00000061787.16	novel	494	5	NA	NA	245	-1576	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	876	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTGTGGGTCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	80994757	80994056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_80994165_80994605
ENSMUSG00000061802.7_7088427_7217047_1	chr18	-	1293	8	ISM	ENSMUSG00000061802.7	ENST00000672877.1	2158	13	56230	0	56230	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTAAGGATATACCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	7217047	7088426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_7088568_7111006_7111122_7127211_7127434_7129398_7129588_7181733_7181849_7211398_7211642_7214568_7214724_7216934
ENSMUSG00000061802.7_7111006_7217772_1	chr18	-	1176	8	ISM	ENSMUSG00000061802.7	ENST00000672877.1	2158	13	55505	22579	55505	-22579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCCACCACCACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	7217772	7111005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_7111122_7127211_7127434_7129398_7129588_7181733_7181849_7211398_7211642_7214568_7214724_7216934_7217046_7217747
ENSMUSG00000061802.7_7111044_7217836_1	chr18	-	1202	8	ISM	ENSMUSG00000061802.7	ENST00000672877.1	2158	13	55441	22617	55441	-22617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCCTGCCTCTGCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	7217836	7111043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_7111122_7127211_7127434_7129398_7129588_7181733_7181849_7211398_7211642_7214568_7214724_7216934_7217046_7217747
ENSMUSG00000061802.7_7127304_7222571_1	chr18	-	1212	8	ISM	ENSMUSG00000061802.7	ENST00000672877.1	2158	13	50706	38877	50706	-38877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGTGCATCGAGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	7222571	7127303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_7127434_7129398_7129588_7181733_7181849_7211398_7211642_7214568_7214724_7216934_7217046_7217747_7217991_7222545
ENSMUSG00000061802.7_7127413_7222669_1	chr18	-	1201	8	ISM	ENSMUSG00000061802.7	ENST00000672877.1	2158	13	50608	38986	50608	-38986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGGCAGAAGCCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	7222669	7127412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_7127434_7129398_7129588_7181733_7181849_7211398_7211642_7214568_7214724_7216934_7217046_7217747_7217991_7222545
ENSMUSG00000061802.7_7129389_7223548_1	chr18	-	1295	8	ISM	ENSMUSG00000061802.7	ENST00000672877.1	2158	13	49729	40962	49729	-40962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTATCCTGGGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	7223548	7129388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_7129588_7181733_7181849_7211398_7211642_7214568_7214724_7216934_7217046_7217747_7217991_7222545_7222756_7223529
ENSMUSG00000061802.7_7129514_7223608_1	chr18	-	1230	8	ISM	ENSMUSG00000061802.7	ENST00000672877.1	2158	13	49669	41087	49669	-41087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTCCTGGCCAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	7223608	7129513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_7129588_7181733_7181849_7211398_7211642_7214568_7214724_7216934_7217046_7217747_7217991_7222545_7222756_7223529
ENSMUSG00000061802.7_7129551_7223676_1	chr18	-	1261	8	ISM	ENSMUSG00000061802.7	ENST00000672877.1	2158	13	49601	41124	49601	-41124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTTGTTGTCAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	7223676	7129550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_7129588_7181733_7181849_7211398_7211642_7214568_7214724_7216934_7217046_7217747_7217991_7222545_7222756_7223529
ENSMUSG00000061802.7_7181793_7265063_1	chr18	-	1228	8	ISM	ENSMUSG00000061802.7	ENST00000672877.1	2158	13	8214	93366	8214	83208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGATGTGAAGGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	7265063	7181792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_7181849_7211398_7211642_7214568_7214724_7216934_7217046_7217747_7217991_7222545_7222756_7223529_7223677_7265000
ENSMUSG00000061802.7_7211445_7273175_1	chr18	-	1228	8	ISM	ENSMUSG00000061802.7	ENST00000672877.1	2158	13	102	123018	102	53556	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAAAGCTGTGGGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	7273175	7211444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_7211642_7214568_7214724_7216934_7217046_7217747_7217991_7222545_7222756_7223529_7223677_7265000_7265149_7273158
ENSMUSG00000061802.7_7211522_7273211_1	chr18	-	1187	8	ISM	ENSMUSG00000061802.7	ENST00000672877.1	2158	13	66	123095	66	53479	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTCCGGAAGTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	7273211	7211521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_7211642_7214568_7214724_7216934_7217046_7217747_7217991_7222545_7222756_7223529_7223677_7265000_7265149_7273158
ENSMUSG00000061802.7_7265001_7294614_1	chr18	-	473	3	NNC	ENSMUSG00000061802.7	novel	474	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACAAATCTTTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	7294614	7265000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_7265149_7266883_7266982_7294387
ENSMUSG00000061802.7_7265001_7294614_2	chr18	-	473	3	NNC	ENSMUSG00000061802.7	novel	474	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1730	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACAAATCTTTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	7294614	7265000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_7265149_7266882_7266982_7294388
ENSMUSG00000061802.7_7265001_7294614_3	chr18	-	474	3	FSM	ENSMUSG00000061802.7	ENST00000576034.5	474	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACAAATCTTTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	7294614	7265000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_7265149_7266882_7266982_7294387
ENSMUSG00000061815.12_74167055_74172155_1	chr1	+	762	6	ISM	ENSMUSG00000061815.12	ENST00000344321.8	1651	10	49	14775	49	-14775	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAGGAGCAGGGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	74167054	74172155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74167112_74168106_74168233_74168497_74168605_74168856_74169001_74170336_74170393_74171883
ENSMUSG00000061815.12_74168192_74172296_1	chr1	+	761	5	ISM	ENSMUSG00000061815.12	ENST00000344321.8	1651	10	1186	14634	1186	-14634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGATGGCCCCCGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	74168191	74172296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74168233_74168497_74168605_74168856_74169001_74170336_74170393_74171883
ENSMUSG00000061815.12_74168583_74172440_1	chr1	+	779	4	ISM	ENSMUSG00000061815.12	ENST00000344321.8	1651	10	1577	14490	1577	-14490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGACCAGTGGAACCATG	NA	NA	NA	NA	NA	NA	NA	NA	74168582	74172440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74168605_74168856_74169001_74170336_74170393_74171883
ENSMUSG00000061815.12_74168953_74173300_1	chr1	+	764	4	ISM	ENSMUSG00000061815.12	ENST00000344321.8	1651	10	1947	13630	1947	-13630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGCCAGGAGCAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	74168952	74173300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74169001_74170336_74170393_74171883_74172506_74173262
ENSMUSG00000061815.12_74171882_74180224_1	chr1	+	875	3	ISM	ENSMUSG00000061815.12	ENST00000344321.8	1651	10	4876	6706	4876	-6706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAATGGGGCGGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	74171881	74180224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74172506_74173262_74173367_74180077
ENSMUSG00000061815.12_74172079_74185923_1	chr1	+	789	4	ISM	ENSMUSG00000061815.12	ENST00000344321.8	1651	10	5073	1007	5073	-1007	internal_fragment	TRUE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATGGAAAGGCACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	74172078	74185923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74172506_74173262_74173367_74180077_74180225_74185812
ENSMUSG00000061815.12_74172186_74186932_1	chr1	+	812	5	ISM	ENSMUSG00000061815.12	ENST00000344321.8	1651	10	5180	-2	5180	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCAGTTCACTCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	74172185	74186932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_74172506_74173262_74173367_74180077_74180225_74185812_74185924_74186802
ENSMUSG00000061816.16_66963454_66965866_1	chr1	-	558	4	ISM	ENSMUSG00000061816.16	ENSMUST00000119429.8	803	7	8647	-3	8626	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCGTGTCTTACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66965866	66963453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_66963717_66964181_66964225_66965366_66965445_66965692
ENSMUSG00000061816.16_66963615_66969460_1	chr1	-	513	5	ISM	ENSMUSG00000061816.16	ENSMUST00000119429.8	803	7	5053	158	5032	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGAAGGATTCCCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	66969460	66963614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_66963717_66964181_66964225_66965366_66965445_66965692_66965867_66969344
ENSMUSG00000061816.16_66963639_66984021_1	chr1	-	616	7	FSM	ENSMUSG00000061816.16	ENSMUST00000027151.12	1082	7	281	185	281	-182	multi-exon	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCAAACAATCTAGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	66984021	66963638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_66963717_66964181_66964225_66965366_66965445_66965692_66965867_66969344_66969489_66973404_66973433_66983950
ENSMUSG00000061816.16_66963696_66973701_1	chr1	-	485	6	ISM	ENSMUSG00000061816.16	ENSMUST00000119429.8	803	7	812	239	791	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAGTTCAAGAACACCTA	NA	NA	NA	NA	NA	NA	NA	NA	66973701	66963695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_66963717_66964181_66964225_66965366_66965445_66965692_66965867_66969344_66969489_66973676
ENSMUSG00000061816.16_66964182_66974492_1	chr1	-	522	6	ISM	ENSMUSG00000061816.16	ENSMUST00000119429.8	803	7	21	725	0	-725	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACATCTATCCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	66974492	66964181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_66964225_66965366_66965445_66965692_66965867_66969344_66969489_66973676_66973702_66974434
ENSMUSG00000061816.16_66965781_66984302_1	chr1	-	610	4	ISM	ENSMUSG00000061816.16	ENSMUST00000027151.12	1082	7	0	2327	0	-556	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCGTTGAGGGTCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	66984302	66965780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_66965867_66969344_66969489_66973404_66973433_66983950
ENSMUSG00000061838.8_95449990_95695781_1	chr6	-	3360	11	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCAGTAGTGTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	95695781	95449989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556210_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ENSMUSG00000061838.8_95449990_95695781_2	chr6	-	3358	11	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCAGTAGTGTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	95695781	95449989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572726_95632438_95632581_95695669
ENSMUSG00000061838.8_95449990_95695781_3	chr6	-	3360	11	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCAGTAGTGTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	95695781	95449989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695676
ENSMUSG00000061838.8_95449990_95695781_4	chr6	-	3358	11	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCAGTAGTGTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	95695781	95449989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571649_95571732_95572634_95572735_95632438_95632581_95695669
ENSMUSG00000061838.8_95449990_95695781_5	chr6	-	3361	11	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCAGTAGTGTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	95695781	95449989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564005_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ENSMUSG00000061838.8_95449990_95695781_6	chr6	-	3365	11	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCAGTAGTGTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	95695781	95449989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_95452146_95474577_95474692_95543359_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ENSMUSG00000061878.17_116423299_116425978_1	chr11	+	1323	4	NIC	ENSMUSG00000061878.17	novel	2527	6	NA	NA	0	-1505	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGATGGTCTGATGCATG	NA	NA	NA	NA	NA	NA	NA	NA	116423298	116425978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_116424195_116424795_116425000_116425677_116425828_116425905
ENSMUSG00000061878.17_116423421_116426569_1	chr11	+	794	6	NIC	ENSMUSG00000061878.17	novel	1879	6	NA	NA	122	-914	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGGGGCTTTGTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	116423420	116426569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_116423518_116424795_116425000_116425677_116425828_116425905_116426001_116426077_116426194_116426437
ENSMUSG00000061878.17_116423473_116426193_1	chr11	+	1287	5	NIC	ENSMUSG00000061878.17	novel	2527	6	NA	NA	174	-1290	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGCTGAGGGTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	116423472	116426193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_116424195_116424795_116425000_116425677_116425828_116425905_116426001_116426077
ENSMUSG00000061878.17_116423963_116426897_1	chr11	+	1257	6	NIC	ENSMUSG00000061878.17	novel	2527	6	NA	NA	212	-586	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTGGTGTTATGCA	NA	NA	NA	NA	NA	NA	NA	NA	116423962	116426897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_116424195_116424795_116425000_116425677_116425828_116425905_116426001_116426077_116426194_116426437
ENSMUSG00000061878.17_116424883_116426821_1	chr11	+	865	5	FSM	ENSMUSG00000061878.17	ENSMUST00000063396.10	2659	5	1132	662	-683	-662	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGACTTCGTCCTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	116424882	116426821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_116425000_116425674_116425828_116425905_116426001_116426077_116426194_116426437
ENSMUSG00000061882.13_124072127_124092805_1	chr5	+	1219	5	NNC	ENSMUSG00000105875.2	novel	1222	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTCAGCGCAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	124072126	124092805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_124072328_124074451_124074583_124089261_124089351_124089814_124089931_124092123
ENSMUSG00000061882.13_124072127_124092805_2	chr5	+	1217	5	NNC	ENSMUSG00000105875.2	novel	1222	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	951	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTCAGCGCAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	124072126	124092805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_124072328_124074451_124074583_124089261_124089351_124089814_124089925_124092119
ENSMUSG00000061882.13_124072127_124092805_3	chr5	+	1214	5	NNC	ENSMUSG00000105875.2	novel	1222	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTCAGCGCAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	124072126	124092805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_124072328_124074451_124074574_124089261_124089351_124089814_124089931_124092119
ENSMUSG00000061882.13_124072127_124092805_4	chr5	+	1218	5	NNC	ENSMUSG00000105875.2	novel	1222	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTCAGCGCAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	124072126	124092805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_124072328_124074456_124074583_124089261_124089351_124089814_124089931_124092119
ENSMUSG00000061882.13_124072127_124092805_5	chr5	+	1223	5	FSM	ENSMUSG00000105875.2	ENST00000537566.5	1222	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTCAGCGCAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	124072126	124092805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_124072328_124074451_124074583_124089261_124089351_124089814_124089931_124092119
ENSMUSG00000061882.13_124072127_124092805_6	chr5	+	1219	5	NNC	ENSMUSG00000105875.2	novel	1222	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTCAGCGCAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	124072126	124092805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_124072328_124074451_124074584_124089266_124089351_124089814_124089931_124092119
ENSMUSG00000061887.15_106769495_106906891_1	chr4	+	2813	18	FSM	ENSMUSG00000061887.15	ENST00000417664.7	2812	18	0	-1	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTCCTGACATACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	106769494	106906891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_106769556_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ENSMUSG00000061887.15_106770100_106904662_1	chr4	+	1083	14	NNC	ENSMUSG00000061887.15	novel	1092	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCCCTGCCTGCCATA	NA	NA	NA	NA	NA	NA	NA	NA	106770099	106904662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895895_106895978_106897159_106897231_106903512_106903592_106904520
ENSMUSG00000061887.15_106770100_106904662_2	chr4	+	1092	15	FSM	ENSMUSG00000061887.15	ENST00000546860.2	1092	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCCCTGCCTGCCATA	NA	NA	NA	NA	NA	NA	NA	NA	106770099	106904662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904520
ENSMUSG00000061887.15_106888210_106897230_1	chr4	+	351	5	ISM	ENSMUSG00000061887.15	ENST00000417338.1	996	14	119156	6355	118110	-6355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTGCTTTCTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	106888209	106897230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_106888289_106894132_106894198_106894798_106894848_106895890_106895978_106897159
ENSMUSG00000061894.16_128483391_128486301_1	chr4	-	718	2	ISM	ENSMUSG00000061894.16	ENST00000373413.2	1250	3	12072	158	12072	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACACTGAGATGGATGACC	NA	NA	NA	NA	NA	NA	NA	NA	128486301	128483390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_128483935_128486127
ENSMUSG00000061894.16_128483545_128498123_1	chr4	-	688	3	FSM	ENSMUSG00000061894.16	ENST00000373413.2	1250	3	250	312	250	-312	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCCGGAACTACCGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	128498123	128483544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_128483935_128486127_128486300_128497997
ENSMUSG00000061894.16_128483598_128498181_1	chr4	-	693	3	FSM	ENSMUSG00000061894.16	ENST00000373413.2	1250	3	192	365	192	-365	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCACGGGGCTTCTTGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	128498181	128483597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_128483935_128486127_128486300_128497997
ENSMUSG00000061894.16_128483684_128498273_1	chr4	-	699	3	FSM	ENSMUSG00000061894.16	ENST00000373413.2	1250	3	100	451	100	-451	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTAAGTGAGTCTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	128498273	128483683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_128483935_128486127_128486300_128497997
ENSMUSG00000061904.13_90952536_90954037_1	chr10	-	694	3	ISM	ENSMUSG00000061904.13	ENST00000552981.6	1355	8	5792	-69	5522	69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTCCTAAATTGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	90954037	90952535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90952987_90953074_90953186_90953905
ENSMUSG00000061904.13_90952670_90954742_1	chr10	-	783	4	ISM	ENSMUSG00000061904.13	ENSMUST00000164505.2	1483	7	5075	0	4817	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCATCTATTCCTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	90954742	90952669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560
ENSMUSG00000061904.13_90952670_90954744_1	chr10	-	674	3	ISM	ENSMUSG00000061904.13	ENST00000548847.1	1164	6	4887	-22	4815	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCATCTATTCCTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	90954744	90952669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90952987_90953905_90954079_90954560
ENSMUSG00000061904.13_90952873_90955568_1	chr10	-	760	5	ISM	ENSMUSG00000061904.13	ENSMUST00000164505.2	1483	7	4249	203	3991	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGATGCCAGAGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90955568	90952872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388
ENSMUSG00000061904.13_90952873_90955570_1	chr10	-	651	4	ISM	ENSMUSG00000061904.13	ENST00000548847.1	1164	6	4061	181	3989	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	894	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGATGCCAGAGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90955570	90952872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90952987_90953905_90954079_90954560_90954743_90955388
ENSMUSG00000061904.13_90952873_90957846_1	chr10	-	823	6	ISM	ENSMUSG00000061904.13	ENSMUST00000164505.2	1483	7	1971	203	1713	-181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3050	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGATGCCAGAGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90957846	90952872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783
ENSMUSG00000061904.13_90953072_90957905_1	chr10	-	771	5	ISM	ENSMUSG00000061904.13	ENSMUST00000164505.2	1483	7	1912	402	1654	-380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGGCTCCCCTGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	90957905	90953071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783
ENSMUSG00000061904.13_90954035_90959568_1	chr10	-	677	5	ISM	ENSMUSG00000061904.13	ENST00000548847.1	1164	6	63	1343	-9	-71	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCATGATGAAGTTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	90959568	90954034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419
ENSMUSG00000061904.13_90954035_90959817_1	chr10	-	717	6	ISM	ENSMUSG00000061904.13	ENSMUST00000076694.13	1612	8	104	1599	0	-71	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCATGATGAAGTTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	90959817	90954034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959777
ENSMUSG00000061904.13_90954559_90959817_1	chr10	-	675	5	ISM	ENSMUSG00000061904.13	ENSMUST00000076694.13	1612	8	104	2123	0	-595	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCGTATTCTCCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	90959817	90954558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959777
ENSMUSG00000061904.13_90954559_90959921_1	chr10	-	779	5	ISM	ENSMUSG00000061904.13	ENSMUST00000076694.13	1612	8	0	2123	0	-595	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3963	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCGTATTCTCCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	90959921	90954558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959777
ENSMUSG00000061904.13_90954660_90957867_1	chr10	-	342	3	ISM	ENSMUSG00000061904.13	ENST00000547720.1	734	5	1692	696	1692	690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGAAGCTGCTAAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	90957867	90954659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_90954743_90955393_90955569_90957783
ENSMUSG00000061911.16_29825446_29877077_1	chr12	+	886	5	ISM	ENSMUSG00000061911.16	ENST00000650560.1	6412	20	9	96083	9	-30724	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCGGTCGGAAAAGCGAA	NA	NA	NA	NA	NA	NA	NA	NA	29825445	29877077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29825593_29833619_29833675_29834200_29834313_29861371_29861734_29876867
ENSMUSG00000061911.16_29825498_29877128_1	chr12	+	885	5	ISM	ENSMUSG00000061911.16	ENST00000650560.1	6412	20	61	96032	61	-30673	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAACAGTGGACTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	29825497	29877128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29825593_29833619_29833675_29834200_29834313_29861371_29861734_29876867
ENSMUSG00000061911.16_29825560_29877170_1	chr12	+	865	5	ISM	ENSMUSG00000061911.16	ENST00000650560.1	6412	20	123	95990	123	-30631	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGTGCTATCAGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	29825559	29877170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29825593_29833619_29833675_29834200_29834313_29861371_29861734_29876867
ENSMUSG00000061911.16_29834199_29877208_1	chr12	+	820	3	ISM	ENSMUSG00000061911.16	ENST00000648665.1	4547	20	8762	94812	579	-30593	internal_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGGGATGTCACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	29834198	29877208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29834313_29861371_29861734_29876864
ENSMUSG00000061911.16_29834220_29877291_1	chr12	+	882	3	ISM	ENSMUSG00000061911.16	ENST00000648665.1	4547	20	8783	94729	600	-30510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTGGAGGAGAGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	29834219	29877291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29834313_29861371_29861734_29876864
ENSMUSG00000061911.16_29834274_29877344_1	chr12	+	881	3	ISM	ENSMUSG00000061911.16	ENST00000648665.1	4547	20	8837	94676	654	-30457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACCAGTGCTTTGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	29834273	29877344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29834313_29861371_29861734_29876864
ENSMUSG00000061911.16_29861397_29877410_1	chr12	+	880	2	ISM	ENSMUSG00000061911.16	ENST00000650560.1	6412	20	35960	95750	27777	-30391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACATGAGTGTGCGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	29861396	29877410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29861734_29876867
ENSMUSG00000061911.16_29861486_29877509_1	chr12	+	890	2	ISM	ENSMUSG00000061911.16	ENST00000650560.1	6412	20	36049	95651	27866	-30292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCAGCTCAGTCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	29861485	29877509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29861734_29876867
ENSMUSG00000061911.16_29861536_29877562_1	chr12	+	893	2	ISM	ENSMUSG00000061911.16	ENST00000650560.1	6412	20	36099	95598	27916	-30239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGTCATGAGAGGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	29861535	29877562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29861734_29876867
ENSMUSG00000061911.16_29861536_29971322_1	chr12	+	3356	17	ISM	ENSMUSG00000061911.16	ENST00000647755.1	5736	20	36099	1893	27916	481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3016	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAACCTTTGGAGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	29861535	29971322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29861734_29876864_29877831_29882286_29882422_29886348_29886440_29888038_29888147_29892393_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29971067
ENSMUSG00000061911.16_29876990_29882336_1	chr12	+	897	2	ISM	ENSMUSG00000061911.16	ENST00000649663.1	6548	19	51553	90655	-13219	-25465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGAACCGGCCACGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	29876989	29882336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29877837_29882286
ENSMUSG00000061911.16_29877037_29882394_1	chr12	+	908	2	ISM	ENSMUSG00000061911.16	ENST00000649663.1	6548	19	51600	90597	-13172	-25407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACAAAGATAGGGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	29877036	29882394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29877837_29882286
ENSMUSG00000061911.16_29877064_29971713_1	chr12	+	3350	16	ISM	ENSMUSG00000061911.16	ENST00000647755.1	5736	20	51627	1502	-13145	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCTGCACAGCCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	29877063	29971713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29877831_29882286_29882422_29886348_29886440_29888038_29888147_29892393_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29971067
ENSMUSG00000061911.16_29877091_29971788_1	chr12	+	3398	16	ISM	ENSMUSG00000061911.16	ENST00000647755.1	5736	20	51654	1427	-13118	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2429	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTGCGGCACTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	29877090	29971788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29877831_29882286_29882422_29886348_29886440_29888038_29888147_29892393_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29971067
ENSMUSG00000061911.16_29877163_29886408_1	chr12	+	869	3	ISM	ENSMUSG00000061911.16	ENST00000649663.1	6548	19	51726	86583	-13046	-21393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTGAATAGCAACAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	29877162	29886408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29877837_29882286_29882422_29886348
ENSMUSG00000061911.16_29877169_29971833_1	chr12	+	3365	16	ISM	ENSMUSG00000061911.16	ENST00000647755.1	5736	20	51732	1382	-13040	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGATACCTTCGAAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	29877168	29971833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29877831_29882286_29882422_29886348_29886440_29888038_29888147_29892393_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29971067
ENSMUSG00000061911.16_29877364_29892468_1	chr12	+	882	5	ISM	ENSMUSG00000061911.16	ENST00000649663.1	6548	19	51927	80523	-12845	-15333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAACCTGGCCAAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	29877363	29892468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29877837_29882286_29882422_29886348_29886440_29888038_29888147_29892393
ENSMUSG00000061911.16_29877415_29892536_1	chr12	+	899	5	ISM	ENSMUSG00000061911.16	ENST00000649663.1	6548	19	51978	80455	-12794	-15265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTTATGGCAAAAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	29877414	29892536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29877837_29882286_29882422_29886348_29886440_29888038_29888147_29892393
ENSMUSG00000061911.16_29877599_29899332_1	chr12	+	876	6	ISM	ENSMUSG00000061911.16	ENST00000649663.1	6548	19	52162	73659	-12610	-8469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGCAGCGCCAGTAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	29877598	29899332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29877837_29882286_29882422_29886348_29886440_29888038_29888147_29892393_29892609_29899243
ENSMUSG00000061911.16_29882316_29972510_1	chr12	+	3351	15	ISM	ENSMUSG00000061911.16	ENST00000647618.1	5627	20	56879	668	-7893	-351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTGTGCGATTAGT	NA	NA	NA	NA	NA	NA	NA	NA	29882315	29972510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29882422_29886348_29886440_29888038_29888147_29892393_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29971067
ENSMUSG00000061911.16_29882342_29901650_1	chr12	+	863	6	ISM	ENSMUSG00000061911.16	ENST00000648665.1	4547	20	56905	70370	-7867	-6151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCGTGATGAGCAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	29882341	29901650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29882422_29886348_29886440_29888038_29888147_29892393_29892609_29899243_29899495_29901532
ENSMUSG00000061911.16_29882351_29972580_1	chr12	+	3386	15	ISM	ENSMUSG00000061911.16	ENST00000647618.1	5627	20	56914	598	-7858	-281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTCACCTGATGCCATAC	NA	NA	NA	NA	NA	NA	NA	NA	29882350	29972580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29882422_29886348_29886440_29888038_29888147_29892393_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29971067
ENSMUSG00000061911.16_29886349_29901769_1	chr12	+	902	5	ISM	ENSMUSG00000061911.16	ENST00000648665.1	4547	20	60912	70251	-3860	-6032	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAATTGTGATGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	29886348	29901769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29886440_29888038_29888147_29892393_29892609_29899243_29899495_29901532
ENSMUSG00000061911.16_29888037_29904353_1	chr12	+	935	5	ISM	ENSMUSG00000061911.16	ENST00000648665.1	4547	20	62600	67667	-2172	-3448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCATAGCATAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	29888036	29904353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29888147_29892393_29892609_29899243_29899495_29901532_29901770_29904231
ENSMUSG00000061911.16_29888074_29971486_1	chr12	+	2886	14	ISM	ENSMUSG00000061911.16	ENST00000644820.1	6522	21	62637	1718	-2135	-534	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGATTATTCTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	29888073	29971486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29888147_29892393_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29904707_29904771_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29970339
ENSMUSG00000061911.16_29892438_29971063_1	chr12	+	2283	12	ISM	ENSMUSG00000061911.16	ENST00000648316.1	6115	20	67006	1798	2229	222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGAGGATGGTGTATGGT	NA	NA	NA	NA	NA	NA	NA	NA	29892437	29971063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29970339
ENSMUSG00000061911.16_29892492_29971113_1	chr12	+	2279	12	ISM	ENSMUSG00000061911.16	ENST00000648316.1	6115	20	67060	1748	2283	272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAATGGCATATGGATT	NA	NA	NA	NA	NA	NA	NA	NA	29892491	29971113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29970339
ENSMUSG00000061911.16_29892551_29972987_1	chr12	+	3366	12	ISM	ENSMUSG00000061911.16	ENST00000647618.1	5627	20	67114	191	2342	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2565	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTATTTATTGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	29892550	29972987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29971067
ENSMUSG00000061911.16_29899243_29971322_1	chr12	+	2372	11	ISM	ENSMUSG00000061911.16	ENST00000648316.1	6115	20	73811	1539	9034	481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	805	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAACCTTTGGAGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	29899242	29971322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29970339
ENSMUSG00000061911.16_29899243_29971842_1	chr12	+	2955	12	ISM	ENSMUSG00000061911.16	ENST00000644820.1	6522	21	73806	1362	9034	-178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGAAATTTGATGGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	29899242	29971842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29899495_29901532_29901770_29904231_29904354_29904707_29904771_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29970339
ENSMUSG00000061911.16_29899311_29945229_1	chr12	+	897	7	ISM	ENSMUSG00000061911.16	ENST00000648665.1	4547	20	73874	26791	9102	-25309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGACGGAGGGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	29899310	29945229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091
ENSMUSG00000061911.16_29899386_29973212_1	chr12	+	3391	11	ISM	ENSMUSG00000061911.16	ENST00000647755.1	5736	20	73949	3	9177	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2519	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGGTCTGAGTCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	29899385	29973212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29971067
ENSMUSG00000061911.16_29901547_29971528_1	chr12	+	2312	10	ISM	ENSMUSG00000061911.16	ENST00000648316.1	6115	20	76115	1333	11338	-492	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGCTTGCCCTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	29901546	29971528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29970339
ENSMUSG00000061911.16_29901547_29972060_1	chr12	+	2907	11	ISM	ENSMUSG00000061911.16	ENST00000644820.1	6522	21	76110	1144	11338	40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGGTTTTGTAAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	29901546	29972060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29901770_29904231_29904354_29904707_29904771_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29970339
ENSMUSG00000061911.16_29901547_29972133_1	chr12	+	2980	11	ISM	ENSMUSG00000061911.16	ENST00000644820.1	6522	21	76110	1071	11338	113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1774	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCAGTCGGCTCTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	29901546	29972133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29901770_29904231_29904354_29904707_29904771_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29970339
ENSMUSG00000061911.16_29901700_29969963_1	chr12	+	896	9	ISM	ENSMUSG00000061911.16	ENST00000648316.1	6115	20	76268	2898	11491	-575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCTTGCACGAGTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	29901699	29969963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893
ENSMUSG00000061911.16_29904269_29971762_1	chr12	+	2286	9	ISM	ENSMUSG00000061911.16	ENST00000648316.1	6115	20	78837	1099	14060	-258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAATCAGATGTTAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	29904268	29971762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29970339
ENSMUSG00000061911.16_29964275_29973009_1	chr12	+	2876	3	ISM	ENSMUSG00000061911.16	ENST00000649207.1	6265	20	138838	7	74066	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2753	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAACTGAAGTTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	29964274	29973009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29964337_29969893_29970038_29970339
ENSMUSG00000061911.16_29969923_29971102_1	chr12	+	878	2	ISM	ENSMUSG00000061911.16	ENST00000648316.1	6115	20	144491	1759	79714	261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCATTCCAAGGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	29969922	29971102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_29970038_29970339
ENSMUSG00000061950.18_66121350_66148127_1	chr17	+	2160	12	ISM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	30989	790	30989	-790	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTCCCAATACCAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	66121349	66148127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ENSMUSG00000061950.18_66131528_66148597_1	chr17	+	2119	10	ISM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	41167	320	41167	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTACACATTTACAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	66131527	66148597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ENSMUSG00000061950.18_66131692_66148851_1	chr17	+	2209	10	ISM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	41331	66	41331	-66	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCACCCACTTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	66131691	66148851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ENSMUSG00000061979.9_134176893_134186517_1	chr5	-	1301	4	ISM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	19096	0	19096	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGACTTGATCATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	134186517	134176892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429
ENSMUSG00000061979.9_134177082_134192551_1	chr5	-	1201	5	ISM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	13062	189	13062	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGCTTGTGGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	134192551	134177081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462
ENSMUSG00000061979.9_134177419_134198093_1	chr5	-	1198	9	ISM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	7520	526	7520	-526	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTTCACTGCTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	134198093	134177418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056
ENSMUSG00000061979.9_134177550_134200723_1	chr5	-	1197	10	ISM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	4890	657	4890	-657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTACAGTTGGCTTGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	134200723	134177549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685
ENSMUSG00000061979.9_134177676_134205298_1	chr5	-	1223	11	FSM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	315	783	315	-783	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGGCCAGGGCCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	134205298	134177675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
ENSMUSG00000061979.9_134177743_134205340_1	chr5	-	1198	11	FSM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	273	850	273	-850	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCACAGCAGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	134205340	134177742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
ENSMUSG00000061979.9_134177792_134205392_1	chr5	-	1201	11	FSM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	221	899	221	-899	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTAGCCAAGTCATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	134205392	134177791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
ENSMUSG00000061979.9_134184613_134205613_1	chr5	-	1248	9	ISM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	0	7720	0	-7720	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGTGGGCTTAGCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	134205613	134184612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
ENSMUSG00000061981.15_77928810_77948409_1	chr11	+	807	8	ISM	ENSMUSG00000061981.15	ENST00000394906.6	2733	13	0	2850	0	-2848	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGACGCAGGCATCCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	77928809	77948409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77928939_77940303_77940386_77944188_77944280_77944446_77944522_77945610_77945702_77946582_77946707_77948087_77948207_77948313
ENSMUSG00000061981.15_77928810_77949516_1	chr11	+	1178	9	ISM	ENSMUSG00000061981.15	ENSMUST00000072289.12	2621	11	53	1744	0	-1741	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGTTCCTTCCCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	77928809	77949516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77928939_77940303_77940386_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332
ENSMUSG00000061981.15_77940301_77948647_1	chr11	+	819	8	ISM	ENSMUSG00000061981.15	ENST00000394906.6	2733	13	11491	2612	11491	-2610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAAGCCAGAGGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	77940300	77948647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77940386_77944188_77944280_77944446_77944522_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527
ENSMUSG00000061981.15_77940301_77949920_1	chr11	+	1202	9	ISM	ENSMUSG00000061981.15	ENSMUST00000072289.12	2621	11	11544	1340	11491	-1337	internal_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCACCTTCCTAGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	77940300	77949920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77940386_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770
ENSMUSG00000061981.15_77945666_77950037_1	chr11	+	1079	9	ISM	ENSMUSG00000061981.15	ENST00000394906.6	2733	13	16856	1222	16856	-1220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCACTGGTGCACAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	77945665	77950037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ENSMUSG00000061981.15_77948775_77950605_1	chr11	+	1085	4	ISM	ENSMUSG00000061981.15	ENST00000394906.6	2733	13	19965	654	19965	-652	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGCCATGGCCTATTG	NA	NA	NA	NA	NA	NA	NA	NA	77948774	77950605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77948941_77949332_77949517_77949770_77949921_77950020
ENSMUSG00000061981.15_77949809_77950994_1	chr11	+	1086	2	ISM	ENSMUSG00000061981.15	ENST00000394906.6	2733	13	20999	265	20999	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTCTTGGCCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	77949808	77950994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_77949921_77950020
ENSMUSG00000061983.8_23661081_23663173_1	chr10	-	579	6	NNC	ENSMUSG00000061983.8	novel	584	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	23663173	23661080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662774_23662891_23662943_23663053
ENSMUSG00000061983.8_23661081_23663173_2	chr10	-	578	6	NNC	ENSMUSG00000061983.8	novel	584	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	23663173	23661080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_23661172_23661479_23661576_23661799_23661903_23662661_23662779_23662891_23662943_23663053
ENSMUSG00000061983.8_23661081_23663173_3	chr10	-	576	6	NNC	ENSMUSG00000061983.8	novel	584	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	23663173	23661080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_23661172_23661473_23661576_23661799_23661895_23662661_23662779_23662891_23662943_23663053
ENSMUSG00000062006.13_130520525_130522799_1	chr3	-	281	3	NNC	ENSMUSG00000062006.13	novel	624	5	NA	NA	1184	-37	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGCACATTTTTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	130522799	130520524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_130520602_130522396_130522501_130522699
ENSMUSG00000062006.13_130522487_130523986_1	chr3	-	208	4	FSM	ENSMUSG00000062006.13	ENSMUST00000133802.6	711	4	-3	506	0	-506	multi-exon	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAAAGTCCTTATGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	130523986	130522486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_130522501_130522699_130522800_130522877_130522952_130523966
ENSMUSG00000062006.13_130522487_130524047_1	chr3	-	269	4	FSM	ENSMUSG00000062006.13	ENSMUST00000133802.6	711	4	-64	506	0	-506	multi-exon	FALSE	canonical	NA	NA	NA	NA	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAAAGTCCTTATGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	130524047	130522486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_130522501_130522699_130522800_130522877_130522952_130523966
ENSMUSG00000062014.14_47047905_47052444_1	chr14	-	1533	3	ISM	ENSMUSG00000062014.14	ENSMUST00000111817.8	4171	7	7255	2299	7255	-2299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGAGGCAGAGACAGGC	NA	NA	NA	NA	NA	NA	NA	NA	47052444	47047904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47049281_47051700_47051775_47052361
ENSMUSG00000062031.14_140522268_140523413_1	chr7	+	660	3	ISM	ENSMUSG00000062031.14	ENST00000409655.5	1827	12	-7	3349	1	-3349	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGACTCCTGGGGCCGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	140522267	140523413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140522479_140522898_140523110_140523175
ENSMUSG00000062031.14_140522268_140523461_1	chr7	+	708	3	ISM	ENSMUSG00000062031.14	ENST00000409655.5	1827	12	-7	3301	1	-3301	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCCTGGCCCTGCGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	140522267	140523461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140522479_140522898_140523110_140523175
ENSMUSG00000062031.14_140522405_140523520_1	chr7	+	630	3	ISM	ENSMUSG00000062031.14	ENST00000409655.5	1827	12	130	3242	130	-3242	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGCCTGGCACTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	140522404	140523520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140522479_140522898_140523110_140523175
ENSMUSG00000062031.14_140522917_140524599_1	chr7	+	685	3	ISM	ENSMUSG00000062031.14	ENST00000409655.5	1827	12	642	2163	642	-2163	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCAGGGCCATCCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	140522916	140524599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140523110_140523175_140523626_140524557
ENSMUSG00000062031.14_140523091_140524909_1	chr7	+	635	4	ISM	ENSMUSG00000062031.14	ENST00000409655.5	1827	12	816	1853	816	-1853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGAGGACATTTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	140523090	140524909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140523110_140523175_140523626_140524557_140524678_140524863
ENSMUSG00000062031.14_140523263_140525165_1	chr7	+	630	4	ISM	ENSMUSG00000062031.14	ENST00000409655.5	1827	12	988	1597	988	-1597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGGATGGTGGCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	140523262	140525165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140523626_140524557_140524678_140524863_140524996_140525150
ENSMUSG00000062031.14_140523448_140526762_1	chr7	+	1458	10	ISM	ENSMUSG00000062031.14	ENST00000409479.5	2139	12	1181	0	1173	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATTCTTCCGTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	140523447	140526762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140523626_140524557_140524678_140524863_140524996_140525150_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ENSMUSG00000062031.14_140523477_140526036_1	chr7	+	661	7	ISM	ENSMUSG00000062031.14	ENST00000409655.5	1827	12	1202	726	1202	-726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGAACTGAGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	140523476	140526036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525868_140525927_140526019
ENSMUSG00000062031.14_140523550_140526080_1	chr7	+	632	7	ISM	ENSMUSG00000062031.14	ENST00000409655.5	1827	12	1275	682	1275	-682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGAGTTTCGCCAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	140523549	140526080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525868_140525927_140526019
ENSMUSG00000062031.14_140524639_140526427_1	chr7	+	621	8	ISM	ENSMUSG00000062031.14	ENST00000409655.5	1827	12	2364	335	2364	-335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGACCTTTGACCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	140524638	140526427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525868_140525927_140526019_140526116_140526243_140526342_140526414
ENSMUSG00000062031.14_140524960_140526564_1	chr7	+	623	7	ISM	ENSMUSG00000062031.14	ENST00000409655.5	1827	12	2685	198	2685	-198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGCACCCCTACTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	140524959	140526564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140524996_140525150_140525263_140525367_140525441_140525868_140525927_140526019_140526116_140526243_140526342_140526414
ENSMUSG00000062031.14_140525148_140526762_1	chr7	+	713	7	ISM	ENSMUSG00000062031.14	ENST00000409655.5	1827	12	2873	0	2873	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATTCTTCCGTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	140525147	140526762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_140525263_140525367_140525441_140525868_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ENSMUSG00000062070.13_105230769_105237997_1	chrX	+	240	3	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	63	9308	63	-9308	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	945	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAATGGAGCCAAGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	105230768	105237997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_105230922_105235612_105235664_105237961
ENSMUSG00000062070.13_105230872_105238078_1	chrX	+	218	3	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	166	9227	166	-9227	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCAGTTGCTGCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	105230871	105238078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_105230922_105235612_105235664_105237961
ENSMUSG00000062070.13_105237962_105238282_1	chrX	+	201	2	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	7256	9023	7256	-9023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGCCAACCCAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	105237961	105238282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_105238118_105238237
ENSMUSG00000062070.13_105238018_105238382_1	chrX	+	245	2	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	7312	8923	7312	-8923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGACCTGTGATTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	105238017	105238382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_105238118_105238237
ENSMUSG00000062070.13_105238037_105240473_1	chrX	+	251	3	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	7331	6832	7331	-6832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	947	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTCCGAGCCTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	105238036	105240473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_105238118_105238237_105238383_105240448
ENSMUSG00000062070.13_105238334_105241486_1	chrX	+	192	3	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	7628	5819	7628	-5819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	866	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGATGAAGAAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	105238333	105241486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_105238383_105240448_105240553_105241447
ENSMUSG00000062070.13_105240515_105243292_1	chrX	+	198	3	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	9809	4013	9809	-4013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGACAAAGTCAATGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	105240514	105243292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_105240553_105241447_105241568_105243252
ENSMUSG00000062070.13_105241507_105243832_1	chrX	+	246	3	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	10801	3473	10801	-3473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGTGAAGATTACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	105241506	105243832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_105241568_105243252_105243368_105243762
ENSMUSG00000062070.13_105243301_105243888_1	chrX	+	193	2	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	12595	3417	12595	-3417	internal_fragment	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCAAGACTGGCCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	105243300	105243888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_105243368_105243762
ENSMUSG00000062070.13_105243351_105243940_1	chrX	+	195	2	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	12645	3365	12645	-3365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	728	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAGTCAGCTGGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	105243350	105243940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_105243368_105243762
ENSMUSG00000062070.13_105243814_105246100_1	chrX	+	185	2	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	13108	1205	13108	-1205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGATTGTTTGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	105243813	105246100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_105243943_105246044
ENSMUSG00000062070.13_105243849_105246166_1	chrX	+	216	2	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	13143	1139	13143	-1139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTCATGGATGAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	105243848	105246166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_105243943_105246044
ENSMUSG00000062070.13_105243904_105246212_1	chrX	+	207	2	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	13198	1093	13198	-1093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATCATAGGTAAGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	105243903	105246212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_105243943_105246044
ENSMUSG00000062070.13_105246088_105246867_1	chrX	+	257	3	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	15382	438	15382	-438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	960	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCAGCAATGTTTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	105246087	105246867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_105246223_105246442_105246542_105246844
ENSMUSG00000062070.13_105246160_105246900_1	chrX	+	218	3	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	15454	405	15454	-405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTCCTGTGCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	105246159	105246900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_105246223_105246442_105246542_105246844
ENSMUSG00000062070.13_105246203_105246966_1	chrX	+	241	3	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	15497	339	15497	-339	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1002	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCTAGTGGCTGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	105246202	105246966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_105246223_105246442_105246542_105246844
ENSMUSG00000062070.13_105246441_105246958_1	chrX	+	215	2	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	15735	347	15735	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCAAGATTCAGCTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	105246440	105246958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_105246542_105246844
ENSMUSG00000062075.14_80737989_80740029_1	chr10	-	1166	5	ISM	ENSMUSG00000062075.14	ENSMUST00000105332.3	1643	9	2217	-643	2217	643	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTATGCTCCTGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	80740029	80737988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948
ENSMUSG00000062075.14_80738361_80740183_1	chr10	-	948	5	ISM	ENSMUSG00000062075.14	ENSMUST00000105332.3	1643	9	2063	-271	2063	271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATTCAGAATCCAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	80740183	80738360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948
ENSMUSG00000062075.14_80738524_80740520_1	chr10	-	958	6	ISM	ENSMUSG00000062075.14	ENSMUST00000105332.3	1643	9	1726	-108	1726	108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCCCATGCCGTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	80740520	80738523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386
ENSMUSG00000062075.14_80739799_80743096_1	chr10	-	978	6	ISM	ENSMUSG00000062075.14	ENSMUST00000179022.8	3370	12	10983	2601	-850	-1167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTATGTCCTGCGGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	80743096	80739798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80742984
ENSMUSG00000062075.14_80740450_80753870_1	chr10	-	948	7	ISM	ENSMUSG00000062075.14	ENSMUST00000179022.8	3370	12	209	3252	209	-1818	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTGGCCCTGGACATGG	NA	NA	NA	NA	NA	NA	NA	NA	80753870	80740449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_80740608_80740719_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
ENSMUSG00000062077.15_31273955_31294974_1	chr5	+	1508	8	NIC	ENSMUSG00000062077.15	novel	1408	9	NA	NA	3	0	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	1729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTCCTTTTGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	31273954	31294974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_+_31274422_31288385_31288559_31289331_31289504_31291393_31291490_31293386_31293621_31294231_31294357_31294464_31294558_31294826
ENSMUSG00000062077.15_31274199_31294839_1	chr5	+	1153	8	NNC	ENSMUSG00000062077.15	novel	1434	9	NA	NA	19	-133	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTCTGATCCAGAGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	31274198	31294839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_31274422_31288385_31288559_31289331_31289504_31291393_31291490_31293386_31293621_31294213_31294357_31294464_31294558_31294820
ENSMUSG00000062077.15_31274259_31294974_1	chr5	+	1228	8	NNC	ENSMUSG00000062077.15	novel	1434	9	NA	NA	79	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTCCTTTTGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	31274258	31294974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_31274422_31288385_31288559_31289331_31289504_31291393_31291490_31293386_31293621_31294213_31294357_31294464_31294558_31294820
ENSMUSG00000062077.15_31274325_31294974_1	chr5	+	1167	9	FSM	ENSMUSG00000062077.15	ENSMUST00000013771.15	1434	9	269	-2	145	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTCCTTTTGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	31274324	31294974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_31274422_31288385_31288559_31289331_31289504_31291393_31291490_31293386_31293621_31294096_31294120_31294231_31294357_31294464_31294558_31294820
ENSMUSG00000062077.15_31289422_31291411_1	chr5	+	169	2	ISM	ENSMUSG00000062077.15	ENST00000296098.4	1322	10	15242	3961	15242	-3561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGCGATGCTGGTGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	31289421	31291411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31289573_31291393
ENSMUSG00000062077.15_31289479_31291456_1	chr5	+	157	2	ISM	ENSMUSG00000062077.15	ENST00000296098.4	1322	10	15299	3916	15299	-3516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGATGGAGGAGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	31289478	31291456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31289573_31291393
ENSMUSG00000062078.16_10428506_10537766_1	chr17	-	1004	8	FSM	ENSMUSG00000062078.16	ENST00000361195.6	1063	8	60	-1	36	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGACCATGCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	10537766	10428505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_10428561_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ENSMUSG00000062078.16_10434360_10501912_2	chr17	-	814	6	ISM	ENSMUSG00000062078.16	ENST00000424802.7	954	7	35890	0	35890	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTGGATGAAGGACTAG	NA	NA	NA	NA	NA	NA	NA	NA	10501912	10434359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_10434404_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767
ENSMUSG00000062116.11_7118780_7120882_1	chr7	-	617	3	ISM	ENSMUSG00000062116.11	ENSMUST00000056246.8	2042	5	3605	1091	3605	-1091	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCAGTGAGTGTGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	7120882	7118779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_7119200_7119611_7119711_7120784
ENSMUSG00000062157.7_135426134_135431559_1	chr4	+	532	4	ISM	ENSMUSG00000062157.7	ENST00000374421.7	1315	6	8304	1463	8304	-1463	internal_fragment	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGAAAGGAAACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	135426133	135431559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_135426283_135428538_135428682_135431020_135431181_135431479
ENSMUSG00000062157.7_135426208_135431610_1	chr4	+	509	4	ISM	ENSMUSG00000062157.7	ENST00000374421.7	1315	6	8378	1412	8378	-1412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCATATCTGGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	135426207	135431610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_135426283_135428538_135428682_135431020_135431181_135431479
ENSMUSG00000062157.7_135428569_135432580_1	chr4	+	534	4	ISM	ENSMUSG00000062157.7	ENST00000374421.7	1315	6	10739	442	10739	-442	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTACCTGGAACGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	135428568	135432580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_135428682_135431020_135431181_135431479_135431611_135432450
ENSMUSG00000062157.7_135431517_135432879_1	chr4	+	523	2	ISM	ENSMUSG00000062157.7	ENST00000374421.7	1315	6	13687	143	13687	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGCCTCTGAAGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	135431516	135432879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_135431611_135432450
ENSMUSG00000062157.7_135431576_135432941_1	chr4	+	526	2	ISM	ENSMUSG00000062157.7	ENST00000374421.7	1315	6	13746	81	13746	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGGCTCCTGTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	135431575	135432941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_135431611_135432450
ENSMUSG00000062168.13_159406376_159414879_1	chrX	-	596	4	ISM	ENSMUSG00000062168.13	ENST00000349874.9	2053	14	61724	237	61724	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCATGTGAGTGTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	159414879	159406375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_159406700_159407559_159407639_159408672_159408837_159414850
ENSMUSG00000062168.13_159406554_159416305_1	chrX	-	612	5	ISM	ENSMUSG00000062168.13	ENST00000349874.9	2053	14	60298	415	60298	-415	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTTTCTATGTAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	159416305	159406553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_159406700_159407559_159407639_159408672_159408837_159414850_159414958_159416189
ENSMUSG00000062168.13_159406659_159421208_1	chrX	-	588	6	ISM	ENSMUSG00000062168.13	ENST00000349874.9	2053	14	55395	520	55395	-520	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAATGCTCATTACAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	159421208	159406658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_159406700_159407559_159407639_159408672_159408837_159414850_159414958_159416189_159416333_159421154
ENSMUSG00000062168.13_159408699_159424894_1	chrX	-	583	5	ISM	ENSMUSG00000062168.13	ENST00000349874.9	2053	14	51709	2560	51709	-2560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGTATTGAAAAGCCTACG	NA	NA	NA	NA	NA	NA	NA	NA	159424894	159408698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_159408837_159414850_159414958_159416189_159416333_159421154_159421302_159424846
ENSMUSG00000062168.13_159408735_159424964_1	chrX	-	617	5	ISM	ENSMUSG00000062168.13	ENST00000349874.9	2053	14	51639	2596	51639	-2596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGAAGTGTTGACTACATG	NA	NA	NA	NA	NA	NA	NA	NA	159424964	159408734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_159408837_159414850_159414958_159416189_159416333_159421154_159421302_159424846
ENSMUSG00000062168.13_159408806_159424998_1	chrX	-	580	5	ISM	ENSMUSG00000062168.13	ENST00000349874.9	2053	14	51605	2667	51605	-2667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGAACATTTTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	159424998	159408805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_159408837_159414850_159414958_159416189_159416333_159421154_159421302_159424846
ENSMUSG00000062168.13_159414883_159429696_1	chrX	-	622	6	ISM	ENSMUSG00000062168.13	ENST00000349874.9	2053	14	46907	8744	46907	-8744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTTCGAGCTCCGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	159429696	159414882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_159414958_159416189_159416333_159421154_159421302_159424846_159424997_159426263_159426301_159429626
ENSMUSG00000062168.13_159429645_159476582_1	chrX	-	626	6	ISM	ENSMUSG00000062168.13	ENST00000349874.9	2053	14	21	23506	21	-23506	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATGATGAACCTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	159476582	159429644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_159429794_159455573_159455621_159459628_159459744_159468165_159468305_159474476_159474553_159476482
ENSMUSG00000062169.14_180978496_180995046_1	chr1	+	1755	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	0	1513	0	1233	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATAATGGACCTTGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	180978495	180995046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
ENSMUSG00000062169.14_180978496_180995117_1	chr1	+	1826	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	0	1442	0	1304	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTTTTTAATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	180978495	180995117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
ENSMUSG00000062175.14_156681927_156696068_1	chr2	+	1387	3	FSM	ENSMUSG00000062175.14	ENST00000373874.6	1401	3	16	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGGTGTGGGGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	156681926	156696068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_156682068_156686075_156686302_156695048
ENSMUSG00000062175.14_156681927_156696664_1	chr2	+	2074	3	FSM	ENSMUSG00000062175.14	ENSMUST00000081335.13	2900	3	0	826	0	598	multi-exon	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTAATCTCTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	156681926	156696664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_156682159_156686075_156686302_156695048
ENSMUSG00000062175.14_156682020_156696713_1	chr2	+	2030	3	FSM	ENSMUSG00000062175.14	ENSMUST00000081335.13	2900	3	93	777	0	647	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTATACCCCATCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	156682019	156696713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_156682159_156686075_156686302_156695048
ENSMUSG00000062175.14_156686124_156696923_1	chr2	+	2053	2	ISM	ENSMUSG00000062175.14	ENSMUST00000073352.10	2690	4	4104	567	4104	-567	intron_retention	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCCTGAGGCTTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	156686123	156696923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156686302_156695048
ENSMUSG00000062175.14_156686271_156696996_1	chr2	+	1979	2	ISM	ENSMUSG00000062175.14	ENSMUST00000073352.10	2690	4	4251	494	4251	-494	intron_retention	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGAATGGCTATTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	156686270	156696996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156686302_156695048
ENSMUSG00000062190.13_57679621_57703584_1	chr6	+	1432	6	ISM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	0	11883	0	-11883	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTGCTCCTAAATTACA	NA	NA	NA	NA	NA	NA	NA	NA	57679620	57703584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401
ENSMUSG00000062190.13_57679730_57709243_1	chr6	+	1386	7	ISM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	109	6224	109	-6224	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGCTCCGGAAAGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	57679729	57709243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180
ENSMUSG00000062190.13_57679806_57709320_1	chr6	+	1387	7	ISM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	185	6147	185	-6147	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGCAGGATAAGAAGTATC	NA	NA	NA	NA	NA	NA	NA	NA	57679805	57709320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180
ENSMUSG00000062190.13_57679910_57711074_1	chr6	+	1393	8	ISM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	289	4393	289	-4393	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGAGTGTGAAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	57679909	57711074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001
ENSMUSG00000062190.13_57680072_57714792_1	chr6	+	1383	9	FSM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	451	675	451	-675	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTGACACAGAACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	57680071	57714792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
ENSMUSG00000062190.13_57680072_57714862_1	chr6	+	1453	9	FSM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	451	605	451	-605	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTGCAAAGACCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	57680071	57714862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
ENSMUSG00000062190.13_57690050_57715041_1	chr6	+	1378	8	ISM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	10429	426	10429	-426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTACATGAACTCTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	57690049	57715041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
ENSMUSG00000062190.13_57699637_57715242_1	chr6	+	1383	7	ISM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	20016	225	20016	-225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCCCAAACCCGAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	57699636	57715242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
ENSMUSG00000062190.13_57700576_57715467_1	chr6	+	1453	6	ISM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	20955	0	20955	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTATCCATAGCCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	57700575	57715467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
ENSMUSG00000062198.6_55104018_55107967_1	chr12	-	248	2	FSM	ENSMUSG00000062198.6	ENST00000556705.5	249	2	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATATTTTTTTATTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	55107967	55104017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_55104138_55107839
ENSMUSG00000062202.15_30437804_30493905_1	chr17	-	1898	3	ISM	ENSMUSG00000062202.15	ENSMUST00000237048.2	1944	11	296915	-1519	296899	1226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTTTTGTAAAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	30493905	30437803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_30439545_30447773_30447853_30493827
ENSMUSG00000062202.15_30437936_30518602_1	chr17	-	1894	4	ISM	ENSMUSG00000062202.15	ENSMUST00000237048.2	1944	11	272218	-1387	272202	1094	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTTTGTTGGTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	30518602	30437935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504
ENSMUSG00000062202.15_30438214_30732649_1	chr17	-	1938	6	ISM	ENSMUSG00000062202.15	ENSMUST00000237048.2	1944	11	58171	-1109	58155	816	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTCCTGTGAGTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	30732649	30438213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529
ENSMUSG00000062202.15_30438382_30736210_1	chr17	-	1903	7	ISM	ENSMUSG00000062202.15	ENSMUST00000237048.2	1944	11	54610	-941	54594	648	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTTCCATGAACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	30736210	30438381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077
ENSMUSG00000062202.15_30438537_30743775_1	chr17	-	1924	8	ISM	ENSMUSG00000062202.15	ENSMUST00000237048.2	1944	11	47045	-786	47029	493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTGCCCTTGAACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	30743775	30438536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686
ENSMUSG00000062202.15_30438891_30746467_1	chr17	-	1938	9	ISM	ENSMUSG00000062202.15	ENSMUST00000237048.2	1944	11	44353	-432	44337	139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGGCTTGTGGATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	30746467	30438890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275
ENSMUSG00000062203.16_11038420_11040515_1	chr16	-	391	2	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	31558	504	31558	-504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCTACAATAATGAAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	11040515	11038419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_11038744_11040448
ENSMUSG00000062203.16_11038559_11041134_1	chr16	-	413	3	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	30939	643	30939	-643	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCACATTATGTCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	11041134	11038558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_11038744_11040448_11040618_11041075
ENSMUSG00000062203.16_11038687_11042363_1	chr16	-	396	4	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	29710	771	29710	-771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGATGACCCTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	11042363	11038686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283
ENSMUSG00000062203.16_11041075_11047166_1	chr16	-	440	4	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	24907	3159	24907	-3159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGTTTTTAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	11047166	11041074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_11041166_11042283_11042458_11045978_11046060_11047072
ENSMUSG00000062203.16_11042407_11048755_1	chr16	-	422	5	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	23318	4491	23318	-4491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCTCCAGGTGAAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	11048755	11042406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700
ENSMUSG00000062203.16_11047125_11050477_1	chr16	-	420	4	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	21596	9209	21596	-9209	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGATCAGTTGATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	11050477	11047124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_11047167_11048373_11048515_11048700_11048856_11050395
ENSMUSG00000062203.16_11050489_11056932_1	chr16	-	397	4	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	15141	12573	15141	-12573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCATTTTACAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	11056932	11050488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_11050577_11053229_11053308_11055394_11055429_11056735
ENSMUSG00000062203.16_11056761_11071618_1	chr16	-	393	4	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	455	18845	455	-18845	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGTGTTCATCGGACA	NA	NA	NA	NA	NA	NA	NA	NA	11071618	11056760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_11056964_11058529_11058572_11058668_11058705_11071506
ENSMUSG00000062203.16_11056816_11071677_1	chr16	-	397	4	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	396	18900	396	-18900	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGAAACCTAAGTCAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	11071677	11056815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_11056964_11058529_11058572_11058668_11058705_11071506
ENSMUSG00000062203.16_11056890_11071754_1	chr16	-	400	4	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	319	18974	319	-18974	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGTGGTTCCTCAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	11071754	11056889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_11056964_11058529_11058572_11058668_11058705_11071506
ENSMUSG00000062232.15_78970689_78973970_1	chr3	-	1271	2	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	78314	866	78314	-851	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCTTTAAACATGATTA	NA	NA	NA	NA	NA	NA	NA	NA	78973970	78970688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78971869_78973879
ENSMUSG00000062232.15_78970844_78974098_1	chr3	-	1244	2	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	78186	1021	78186	-1006	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGGTTTTAGAGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78974098	78970843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78971869_78973879
ENSMUSG00000062232.15_78970911_78974142_1	chr3	-	1221	2	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	78142	1088	78142	-1073	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTGTTTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78974142	78970910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78971869_78973879
ENSMUSG00000062232.15_78971242_78976507_1	chr3	-	1239	3	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	75777	1419	75777	-1404	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGGTTTCTGAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	78976507	78971241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78971869_78973879_78974180_78976195
ENSMUSG00000062232.15_78971369_78977396_1	chr3	-	1460	4	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	74888	1546	74888	-1531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGCTTGTCCACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	78977396	78971368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296
ENSMUSG00000062232.15_78971811_78986467_1	chr3	-	1452	6	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	65817	1988	65817	-1973	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGGAGAGCACAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	78986467	78971810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312
ENSMUSG00000062232.15_78971822_78981624_1	chr3	-	1219	5	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	98758	2011	70660	-1984	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGCCACCCAAAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	78981624	78971821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981538
ENSMUSG00000062232.15_78973880_78981768_1	chr3	-	1316	4	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	98614	4069	70516	-4042	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCTTCCCTCACACCCC	NA	NA	NA	NA	NA	NA	NA	NA	78981768	78973879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78974180_78976195_78976756_78977296_78977523_78981538
ENSMUSG00000062232.15_78973969_78988473_1	chr3	-	1462	6	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	63811	4146	63811	-4131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAAGCCACAGTGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	78988473	78973968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368
ENSMUSG00000062232.15_78974031_78988561_1	chr3	-	1488	6	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	63723	4208	63723	-4193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCCACTGAGGCCCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	78988561	78974030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368
ENSMUSG00000062232.15_78974043_78986379_1	chr3	-	1219	5	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	94003	4232	65905	-4205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCATGGTGGCACGGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	78986379	78974042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78974180_78976195_78976756_78977296_78977523_78981538_78981768_78986312
ENSMUSG00000062232.15_78974095_78986429_1	chr3	-	1217	5	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	93953	4284	65855	-4257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACCCGGCCAGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	78986429	78974094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78974180_78976195_78976756_78977296_78977523_78981538_78981768_78986312
ENSMUSG00000062232.15_78974153_78986491_1	chr3	-	1221	5	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	93891	4342	65793	-4315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTCCCACACCTCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	78986491	78974152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78974180_78976195_78976756_78977296_78977523_78981538_78981768_78986312
ENSMUSG00000062232.15_78976196_78990630_1	chr3	-	1527	6	ISM	ENSMUSG00000062232.15	ENST00000264431.8	6925	23	62000	6371	61654	-6358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGTGGAAATGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	78990630	78976195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78990473
ENSMUSG00000062232.15_78976238_78988403_1	chr3	-	1215	5	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	91979	6427	63881	-6400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATAGCTGTGACGCCG	NA	NA	NA	NA	NA	NA	NA	NA	78988403	78976237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78976756_78977296_78977523_78981538_78981768_78986312_78986520_78988368
ENSMUSG00000062232.15_78976280_78988476_1	chr3	-	1246	5	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	91906	6469	63808	-6442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCGTGACTACAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	78988476	78976279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78976756_78977296_78977523_78981538_78981768_78986312_78986520_78988368
ENSMUSG00000062232.15_78976355_78990802_1	chr3	-	1454	7	ISM	ENSMUSG00000062232.15	ENST00000264431.8	6925	23	61828	6530	61482	-6517	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGGCGACACAGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	78990802	78976354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78990473_78990630_78990715
ENSMUSG00000062232.15_78976416_78990863_1	chr3	-	1454	7	ISM	ENSMUSG00000062232.15	ENST00000264431.8	6925	23	61767	6591	61421	-6578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAACAAGCCCAATCCCG	NA	NA	NA	NA	NA	NA	NA	NA	78990863	78976415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78990473_78990630_78990715
ENSMUSG00000062232.15_78976546_78993102_1	chr3	-	1439	8	ISM	ENSMUSG00000062232.15	ENST00000264431.8	6925	23	59528	6721	59182	-6708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGGCACACTCACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	78993102	78976545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78990473_78990630_78990715_78990928_78993051
ENSMUSG00000062232.15_78976588_78990755_1	chr3	-	1218	7	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	89627	6777	61529	-6750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACAGACCATTCAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	78990755	78976587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78976756_78977296_78977523_78981538_78981768_78986312_78986520_78988368_78988593_78990505_78990630_78990715
ENSMUSG00000062232.15_78976629_78990819_1	chr3	-	1241	7	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	89563	6818	61465	-6791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGGAGCTGGACATCATG	NA	NA	NA	NA	NA	NA	NA	NA	78990819	78976628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78976756_78977296_78977523_78981538_78981768_78986312_78986520_78988368_78988593_78990505_78990630_78990715
ENSMUSG00000062232.15_78976699_78990865_1	chr3	-	1217	7	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	89517	6888	61419	-6861	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCCTAGCACAGAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	78990865	78976698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78976756_78977296_78977523_78981538_78981768_78986312_78986520_78988368_78988593_78990505_78990630_78990715
ENSMUSG00000062232.15_78977366_78993118_1	chr3	-	1220	7	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	87264	7555	59166	-7528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGCAACCTAGGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	78993118	78977365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78977523_78981538_78981768_78986312_78986520_78988368_78988593_78990505_78990630_78990715_78990928_78993051
ENSMUSG00000062232.15_78977423_78993195_1	chr3	-	1240	7	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	87187	7612	59089	-7585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTGCCAGTCTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	78993195	78977422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78977523_78981538_78981768_78986312_78986520_78988368_78988593_78990505_78990630_78990715_78990928_78993051
ENSMUSG00000062232.15_78977498_78993263_1	chr3	-	1233	7	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	87119	7687	59021	-7660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGATAATTTCTCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	78993263	78977497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78977523_78981538_78981768_78986312_78986520_78988368_78988593_78990505_78990630_78990715_78990928_78993051
ENSMUSG00000062232.15_78981613_78993437_1	chr3	-	1308	6	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	86945	11802	58847	-11775	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCTCACTGACTGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	78993437	78981612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78981768_78986312_78986520_78988368_78988593_78990505_78990630_78990715_78990928_78993051
ENSMUSG00000062232.15_78986392_78996061_1	chr3	-	1455	7	ISM	ENSMUSG00000062232.15	ENST00000264431.8	6925	23	56569	16567	56223	-16554	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGGACTGCAGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	78996061	78986391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78986520_78988368_78988593_78990473_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951
ENSMUSG00000062232.15_78986438_78995342_1	chr3	-	1217	6	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	85040	16627	56942	-16600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCTCAGCAGCCGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	78995342	78986437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78986520_78988368_78988593_78990505_78990630_78990715_78990928_78993051_78993436_78995151
ENSMUSG00000062232.15_78988413_78999254_1	chr3	-	1467	7	ISM	ENSMUSG00000062232.15	ENST00000264431.8	6925	23	53376	18588	53030	-18575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGACACTGTCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	78999254	78988412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78988593_78990473_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118
ENSMUSG00000062232.15_78988449_78996074_1	chr3	-	1228	6	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	84308	18638	56210	-18611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCCAACCTGGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	78996074	78988448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78988593_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951
ENSMUSG00000062232.15_78988482_78999312_1	chr3	-	1456	7	ISM	ENSMUSG00000062232.15	ENST00000264431.8	6925	23	53318	18657	52972	-18644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCCCAGATGGCTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	78999312	78988481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78988593_78990473_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118
ENSMUSG00000062232.15_78990472_78999912_1	chr3	-	1509	7	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	52372	20649	52372	-20634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGTTAAAGTGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	78999912	78990471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803
ENSMUSG00000062232.15_78993158_79001717_1	chr3	-	1471	8	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	50567	23335	50567	-23320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAACAAACCAGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	79001717	78993157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591
ENSMUSG00000062232.15_78993299_79002182_1	chr3	-	1432	9	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	50102	23476	50102	-23461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACTCTTCCGCAACATT	NA	NA	NA	NA	NA	NA	NA	NA	79002182	78993298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119
ENSMUSG00000062232.15_78993347_79002253_1	chr3	-	1455	9	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	50031	23524	50031	-23509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCTCAGCACCGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	79002253	78993346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119
ENSMUSG00000062232.15_78995324_79006476_1	chr3	-	1448	10	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	45808	25501	45808	-25486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCACCGCAAAGGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	79006476	78995323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400
ENSMUSG00000062232.15_79000010_79052386_1	chr3	-	1457	9	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	-102	30187	-102	-30172	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTGAGAGGGAAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	79052386	79000009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79052162
ENSMUSG00000062232.15_79000066_79052450_1	chr3	-	1465	9	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	-166	30243	-166	-30228	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACAGCGTTGACTCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	79052450	79000065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79052162
ENSMUSG00000062232.15_79000097_79080286_1	chr3	-	1218	9	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	96	30286	96	-30259	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCTCTGAAAAGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	79080286	79000096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79080214
ENSMUSG00000062232.15_79000120_79052505_1	chr3	-	1466	9	ISM	ENSMUSG00000062232.15	ENST00000264431.8	6925	23	125	30295	125	-30282	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTGCCCTTCATCTTA	NA	NA	NA	NA	NA	NA	NA	NA	79052505	79000119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79052162
ENSMUSG00000062232.15_79000149_79080355_1	chr3	-	1235	9	ISM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	27	30338	27	-30311	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGACGTTAACAAAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	79080355	79000148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79080214
ENSMUSG00000062234.15_108717286_108746661_1	chr5	-	2984	16	ISM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	30944	6	30850	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGTCTCTGGCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	108746661	108717285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632
ENSMUSG00000062234.15_108717389_108746715_1	chr5	-	2935	16	ISM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	30890	109	30796	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTCTCTCCTGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	108746715	108717388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632
ENSMUSG00000062234.15_108717572_108750799_1	chr5	-	2958	18	ISM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	26806	292	26712	152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGACAAATACCATTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	108750799	108717571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709
ENSMUSG00000062234.15_108717744_108730033_1	chr5	-	909	7	ISM	ENSMUSG00000062234.15	ENST00000618573.4	1231	8	47478	20	47478	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTCGAGGCCCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	108730033	108717743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979
ENSMUSG00000062234.15_108717772_108754318_1	chr5	-	2950	20	ISM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	23287	492	23193	-48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGCATGGTCTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	108754318	108717771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245
ENSMUSG00000062234.15_108718039_108730150_1	chr5	-	914	6	ISM	ENSMUSG00000062234.15	ENST00000618573.4	1231	8	47361	315	47361	-315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCGTGCAGTGCTGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	108730150	108718038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979
ENSMUSG00000062234.15_108718039_108754823_1	chr5	-	2982	20	ISM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	22782	759	22688	-315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCGTGCAGTGCTGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	108754823	108718038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747
ENSMUSG00000062234.15_108718142_108730208_1	chr5	-	869	6	ISM	ENSMUSG00000062234.15	ENST00000618573.4	1231	8	47303	418	47303	-418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTGTCCACTCTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	108730208	108718141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979
ENSMUSG00000062234.15_108719297_108777559_1	chr5	-	961	6	ISM	ENSMUSG00000062234.15	ENST00000618573.4	1231	8	-48	1573	46	-1573	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGAACTTGCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	108777559	108719296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730213_108777388
ENSMUSG00000062234.15_108719841_108764917_1	chr5	-	3010	21	ISM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	12688	2561	12594	-2117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCAGGCCAAGCCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	108764917	108719840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774
ENSMUSG00000062234.15_108724480_108771208_1	chr5	-	2930	21	ISM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	6397	7200	6303	-6756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCTTGACCCATTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	108771208	108724479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125
ENSMUSG00000062234.15_108730042_108777559_1	chr5	-	3026	22	ISM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	46	12762	46	-12318	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTCCCATCCACCCACA	NA	NA	NA	NA	NA	NA	NA	NA	108777559	108730041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ENSMUSG00000062248.6_51799380_51803649_1	chr13	+	157	2	ISM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	112	1047	112	-1047	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGTACCCAAAACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	51799379	51803649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_51799508_51803620
ENSMUSG00000062248.6_51799469_51804405_1	chr13	+	200	3	FSM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	201	291	201	-291	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAGAACAACAAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	51799468	51804405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_51799508_51803620_51803749_51804372
ENSMUSG00000062248.6_51803699_51804491_1	chr13	+	169	2	ISM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	4431	205	4431	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATACTTGAAAAGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	51803698	51804491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_51803749_51804372
ENSMUSG00000062270.15_89973724_89977262_1	chr9	-	1079	4	ISM	ENSMUSG00000062270.15	ENSMUST00000085248.12	1882	13	19506	6	19506	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	947	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	89977262	89973723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173
ENSMUSG00000062270.15_89973940_89979447_1	chr9	-	988	6	ISM	ENSMUSG00000062270.15	ENSMUST00000085248.12	1882	13	17321	222	17321	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATCCTTTGCAAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	89979447	89973939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424
ENSMUSG00000062270.15_89974021_89979474_1	chr9	-	934	6	ISM	ENSMUSG00000062270.15	ENSMUST00000191189.7	1223	11	17323	-187	17294	187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAAGGTTCACTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	89979474	89974020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424
ENSMUSG00000062270.15_89974096_89979942_1	chr9	-	924	7	ISM	ENSMUSG00000062270.15	ENSMUST00000191189.7	1223	11	16855	-112	16826	112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTCTGTTCCTTTGACA	NA	NA	NA	NA	NA	NA	NA	NA	89979942	89974095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916
ENSMUSG00000062270.15_89974208_89985734_1	chr9	-	1007	10	ISM	ENSMUSG00000062270.15	ENSMUST00000085248.12	1882	13	11034	490	11034	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTCTTCCTTTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	89985734	89974207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985707
ENSMUSG00000062270.15_89974208_89985797_1	chr9	-	1070	10	ISM	ENSMUSG00000062270.15	ENSMUST00000085248.12	1882	13	10971	490	10971	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTCTTCCTTTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	89985797	89974207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985707
ENSMUSG00000062270.15_89974208_89989329_1	chr9	-	1022	10	ISM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	7498	490	7439	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTCTTCCTTTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	89989329	89974207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287
ENSMUSG00000062270.15_89974370_89989324_1	chr9	-	972	11	ISM	ENSMUSG00000062270.15	ENSMUST00000085248.12	1882	13	7444	652	7444	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGTGCTCGCCCTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	89989324	89974369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985707_89985825_89989287
ENSMUSG00000062270.15_89975824_89996645_1	chr9	-	984	12	ISM	ENSMUSG00000062270.15	ENSMUST00000085248.12	1882	13	123	2106	123	-1616	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTATTACTGAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	89996645	89975823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985707_89985825_89989287_89989356_89992178_89992226_89996588
ENSMUSG00000062270.15_89975838_89996751_1	chr9	-	959	11	ISM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	76	2120	17	-1630	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAGAAAAGCCTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	89996751	89975837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ENSMUSG00000062270.15_89976408_89996797_1	chr9	-	971	10	ISM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	30	2690	0	-2200	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATAAGACTTTTAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	89996797	89976407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ENSMUSG00000062300.15_19458247_19464064_1	chr7	-	650	2	ISM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	19394	161	19394	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAGTGGAACCACACAGA	NA	NA	NA	NA	NA	NA	NA	NA	19464064	19458246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19458795_19463962
ENSMUSG00000062300.15_19458464_19466890_1	chr7	-	649	4	ISM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	16568	378	16568	-378	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACATGGAGTCCCATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	19466890	19458463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19458795_19463962_19464112_19464536_19464655_19466839
ENSMUSG00000062300.15_19458520_19466972_1	chr7	-	675	4	ISM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	16486	434	16486	-434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAATGAAGGCAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	19466972	19458519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19458795_19463962_19464112_19464536_19464655_19466839
ENSMUSG00000062300.15_19458603_19467026_1	chr7	-	646	4	ISM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	16432	517	16432	-517	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAACGGGGGTCCTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	19467026	19458602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19458795_19463962_19464112_19464536_19464655_19466839
ENSMUSG00000062300.15_19463980_19472031_1	chr7	-	642	4	ISM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	11427	5894	11427	-5894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCATCCTGGTGCGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	19472031	19463979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19464112_19464536_19464655_19466839_19467137_19471936
ENSMUSG00000062300.15_19464089_19472153_1	chr7	-	655	4	ISM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	11305	6003	11305	-6003	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGGCCCAGGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	19472153	19464088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19464112_19464536_19464655_19466839_19467137_19471936
ENSMUSG00000062300.15_19466961_19483253_1	chr7	-	653	3	ISM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	205	8875	205	-8875	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCAGCCGATACTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	19483253	19466960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19467137_19471936_19472300_19483139
ENSMUSG00000062300.15_19467007_19483315_1	chr7	-	669	3	ISM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	143	8921	143	-8921	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAAAGATACTCAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	19483315	19467006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_19467137_19471936_19472300_19483139
ENSMUSG00000062312.6_98303319_98323841_1	chr11	+	1393	11	ISM	ENSMUSG00000062312.6	ENST00000445658.6	3164	21	54	3653	23	-3653	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACCATGCGTAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	98303318	98323841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98303562_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736
ENSMUSG00000062312.6_98303437_98323970_1	chr11	+	1323	12	ISM	ENSMUSG00000062312.6	ENST00000445658.6	3164	21	172	3524	62	-3524	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCCCAGTGGAGCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	98303436	98323970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98303562_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956
ENSMUSG00000062312.6_98303480_98313630_1	chr11	+	705	6	ISM	ENSMUSG00000062312.6	ENST00000584450.5	3632	26	105	13864	105	-13864	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTGACTGTTGCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	98303479	98313630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580
ENSMUSG00000062312.6_98303498_98324020_1	chr11	+	1312	12	ISM	ENSMUSG00000062312.6	ENST00000445658.6	3164	21	233	3474	123	-3474	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGAGCTAAGGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	98303497	98324020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98303562_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956
ENSMUSG00000062312.6_98303523_98313696_1	chr11	+	728	6	ISM	ENSMUSG00000062312.6	ENST00000584450.5	3632	26	148	13798	148	-13798	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGTCTCGCTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98303522	98313696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580
ENSMUSG00000062312.6_98310915_98325690_1	chr11	+	2718	22	ISM	ENSMUSG00000062312.6	ENST00000584450.5	3632	26	7540	1804	7540	-1804	internal_fragment	TRUE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCCTGATTTGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	98310914	98325690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627
ENSMUSG00000062312.6_98310977_98325729_1	chr11	+	2695	22	ISM	ENSMUSG00000062312.6	ENST00000584450.5	3632	26	7602	1765	7602	-1765	internal_fragment	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCCAATCTGCACCATC	NA	NA	NA	NA	NA	NA	NA	NA	98310976	98325729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627
ENSMUSG00000062312.6_98311781_98326384_1	chr11	+	2692	23	ISM	ENSMUSG00000062312.6	ENST00000584450.5	3632	26	8406	1110	8406	-1110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTCTACCGTTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	98311780	98326384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350
ENSMUSG00000062312.6_98311826_98326445_1	chr11	+	2708	23	ISM	ENSMUSG00000062312.6	ENST00000584450.5	3632	26	8451	1049	8451	-1049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTGGTACCCCAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	98311825	98326445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350
ENSMUSG00000062312.6_98311883_98326490_1	chr11	+	2696	23	ISM	ENSMUSG00000062312.6	ENST00000584450.5	3632	26	8508	1004	8508	-1004	internal_fragment	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGGGAGCACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	98311882	98326490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350
ENSMUSG00000062312.6_98312958_98326806_1	chr11	+	2695	23	ISM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	9662	1736	9583	-688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	740	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGATCTCCACTGGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	98312957	98326806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754
ENSMUSG00000062312.6_98312987_98326907_1	chr11	+	2767	23	ISM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	9691	1635	9612	-587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	834	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCAGCCCTCTACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	98312986	98326907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754
ENSMUSG00000062312.6_98313581_98327012_1	chr11	+	2774	21	ISM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	10285	1530	10206	-482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCAGGCCCGAGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	98313580	98327012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754
ENSMUSG00000062312.6_98313826_98327192_1	chr11	+	2702	21	ISM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	10530	1350	10451	-302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	903	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGCCTCCCATCCGACCT	NA	NA	NA	NA	NA	NA	NA	NA	98313825	98327192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ENSMUSG00000062312.6_98313884_98327236_1	chr11	+	2688	21	ISM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	10588	1306	10509	-258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTCTCTCTCCTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	98313883	98327236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ENSMUSG00000062312.6_98313935_98327294_1	chr11	+	2695	21	ISM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	10639	1248	10560	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGGAGAACCCTGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	98313934	98327294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ENSMUSG00000062312.6_98315660_98327413_1	chr11	+	2692	20	ISM	ENSMUSG00000062312.6	ENST00000445658.6	3164	21	12395	81	12285	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGTCCTCCACCAAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	98315659	98327413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ENSMUSG00000062312.6_98324770_98327411_1	chr11	+	1326	8	ISM	ENSMUSG00000062312.6	ENST00000445658.6	3164	21	21505	83	21395	-83	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGGTCCTCCACCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	98324769	98327411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ENSMUSG00000062312.6_98325101_98327256_1	chr11	+	723	6	ISM	ENSMUSG00000062312.6	ENST00000584450.5	3632	26	21726	238	21726	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGGGTTGTCAAAGACG	NA	NA	NA	NA	NA	NA	NA	NA	98325100	98327256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98327138
ENSMUSG00000062312.6_98325165_98327332_1	chr11	+	735	6	ISM	ENSMUSG00000062312.6	ENST00000584450.5	3632	26	21790	162	21790	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTCTCAGCCCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	98325164	98327332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98327138
ENSMUSG00000062312.6_98325677_98327461_1	chr11	+	708	4	ISM	ENSMUSG00000062312.6	ENST00000584450.5	3632	26	22302	33	22302	-33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTACCTAGGCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	98325676	98327461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_98325775_98326100_98326199_98326350_98326540_98327138
ENSMUSG00000062328.9_75133548_75136455_2	chr18	+	769	7	NNC	ENSMUSG00000062328.9	novel	775	7	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTGTCTAGTAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	75133547	75136455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_75133615_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136273
ENSMUSG00000062352.16_21319807_21336186_1	chr12	-	1817	7	NNC	ENSMUSG00000062352.16	novel	1921	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGCTTTCCTTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	21336186	21319806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324899_21326820_21326900_21329400_21329532_21336106
ENSMUSG00000062352.16_21319807_21336235_1	chr12	-	1866	7	NNC	ENSMUSG00000062352.16	novel	1921	7	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGCTTTCCTTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	21336235	21319806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324899_21326820_21326900_21329400_21329532_21336106
ENSMUSG00000062352.16_21324844_21335965_1	chr12	-	383	4	ISM	ENSMUSG00000062352.16	ENSMUST00000173729.8	1701	7	133	4750	133	-3555	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGAAACTGGCCGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	21335965	21324843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_21324904_21326820_21326900_21329400_21329532_21335852
ENSMUSG00000062373.9_58654118_58666258_1	chr15	-	3014	5	ISM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	29121	0	29121	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGCTTCTGTATCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	58666258	58654117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190
ENSMUSG00000062373.9_58654314_58694780_1	chr15	-	2952	7	FSM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	599	196	599	-196	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCATTCTGTTGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58694780	58654313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
ENSMUSG00000062373.9_58654846_58695379_1	chr15	-	3019	7	FSM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	0	728	0	-728	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGCACTTTGGATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	58695379	58654845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
ENSMUSG00000062376.8_46678345_46690311_2	chr19	+	666	5	FSM	ENSMUSG00000062376.8	ENSMUST00000074912.8	2176	5	0	1510	0	-1510	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATAGGTTGAATCATT	NA	NA	NA	NA	NA	NA	NA	NA	46678344	46690311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_46678525_46687994_46688058_46688176_46688221_46689213_46689235_46689953
ENSMUSG00000062376.8_46688011_46690427_1	chr19	+	585	3	NNC	ENSMUSG00000062376.8	novel	2176	5	NA	NA	9666	-1394	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTCTCTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	46688010	46690427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_46688058_46688176_46688241_46689953
ENSMUSG00000062380.5_124138163_124148422_1	chr8	+	1536	4	FSM	ENSMUSG00000062380.5	ENSMUST00000071134.4	1868	4	0	332	0	-332	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCGCAGCTGGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	124138162	124148422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_124138402_124144831_124144941_124145678_124145790_124147345
ENSMUSG00000062380.5_124138163_124148485_1	chr8	+	1599	4	FSM	ENSMUSG00000062380.5	ENSMUST00000071134.4	1868	4	0	269	0	-269	multi-exon	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAGAGCCATCTAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	124138162	124148485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_124138402_124144831_124144941_124145678_124145790_124147345
ENSMUSG00000062380.5_124144855_124148754_1	chr8	+	1606	3	ISM	ENSMUSG00000062380.5	ENSMUST00000071134.4	1868	4	6692	0	6526	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTATTGGAGATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	124144854	124148754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124144941_124145678_124145790_124147345
ENSMUSG00000062380.5_124144861_124148754_1	chr8	+	1595	3	ISM	ENSMUSG00000062380.5	ENSMUST00000212743.2	776	4	6532	-921	6532	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTATTGGAGATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	124144860	124148754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124144941_124145678_124145790_124147350
ENSMUSG00000062397.9_36997723_37002149_1	chr15	-	3512	2	ISM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	5497	452	1918	-452	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTTTTAGTTTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	37002149	36997722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_37001168_37002082
ENSMUSG00000062397.9_36997949_37007453_1	chr15	-	3546	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	193	678	160	-678	multi-exon	FALSE	canonical	NA	NA	NA	NA	3356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGATTTCTAATGGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	37007453	36997948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
ENSMUSG00000062397.9_36998001_37007502_1	chr15	-	3543	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	144	730	111	-730	multi-exon	FALSE	canonical	NA	NA	NA	NA	3112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTGCTTCCACCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	37007502	36998000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
ENSMUSG00000062397.9_36998073_37007646_1	chr15	-	3615	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	0	802	0	-802	multi-exon	FALSE	canonical	NA	NA	NA	NA	1925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCTGTTCCATAATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	37007646	36998072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
ENSMUSG00000062397.9_37000684_37004067_1	chr15	-	622	2	FSM	ENSMUSG00000062397.9	ENST00000519744.5	622	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGTTAAAGAATGGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	37004067	37000683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_37001168_37003929
ENSMUSG00000062397.9_37001058_37007646_1	chr15	-	733	5	NNC	ENSMUSG00000062397.9	novel	669	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTTTACGCTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	37007646	37001057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_37001168_37002082_37002191_37003929_37004067_37006916_37007020_37007371
ENSMUSG00000062397.9_37001058_37007646_2	chr15	-	734	5	FSM	ENSMUSG00000062397.9	ENST00000521272.5	669	5	-33	-32	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTTTACGCTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	37007646	37001057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37006915_37007020_37007371
ENSMUSG00000062444.16_81110381_81127247_1	chr7	-	2541	19	ISM	ENSMUSG00000062444.16	ENST00000666973.1	3116	25	16123	-14	16123	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATCTTCACCTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	81127247	81110380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81110550_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063
ENSMUSG00000062444.16_81110483_81127360_1	chr7	-	2463	20	ISM	ENSMUSG00000062444.16	ENST00000666973.1	3116	25	16010	88	16010	-88	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCCAGCTGACCGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	81127360	81110482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81110550_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335
ENSMUSG00000062444.16_81112702_81127702_1	chr7	-	2437	20	ISM	ENSMUSG00000062444.16	ENST00000666973.1	3116	25	15668	2307	15668	-2307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGGCCCCTGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	81127702	81112701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653
ENSMUSG00000062444.16_81112989_81127814_1	chr7	-	2501	19	ISM	ENSMUSG00000062444.16	ENST00000666973.1	3116	25	15556	2594	15556	-2594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTACCCAGCACATGTT	NA	NA	NA	NA	NA	NA	NA	NA	81127814	81112988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653
ENSMUSG00000062444.16_81113432_81134269_1	chr7	-	2512	19	ISM	ENSMUSG00000062444.16	ENST00000666973.1	3116	25	9101	3037	9101	-3037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGGGGGCCTTGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	81134269	81113431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173
ENSMUSG00000062444.16_81113609_81134830_1	chr7	-	2459	21	ISM	ENSMUSG00000062444.16	ENST00000666973.1	3116	25	8540	3214	8540	-3214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGAGGGGCTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	81134830	81113608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781
ENSMUSG00000062444.16_81113893_81143299_1	chr7	-	2424	21	ISM	ENSMUSG00000062444.16	ENST00000666973.1	3116	25	71	3498	71	-3498	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGCTGACCTGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	81143299	81113892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81143255
ENSMUSG00000062444.16_81114190_81143427_1	chr7	-	2499	20	ISM	ENSMUSG00000062444.16	ENST00000666973.1	3116	25	-57	3795	0	-3795	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCTGGGTGGTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	81143427	81114189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81143255
ENSMUSG00000062526.5_67358499_67361192_1	chr18	-	707	3	ISM	ENSMUSG00000062526.5	ENST00000309976.13	1244	7	9477	0	9477	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGACACTACCACTCGC	NA	NA	NA	NA	NA	NA	NA	NA	67361192	67358498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67358956_67359853_67359995_67361083
ENSMUSG00000062526.5_67358633_67362052_1	chr18	-	625	4	ISM	ENSMUSG00000062526.5	ENST00000309976.13	1244	7	8617	134	8617	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTACGGAATAAATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	67362052	67358632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67358956_67359853_67359995_67361083_67361193_67362000
ENSMUSG00000062526.5_67358762_67366745_1	chr18	-	697	6	ISM	ENSMUSG00000062526.5	ENST00000309976.13	1244	7	3924	263	3924	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGTATGGTGATACG	NA	NA	NA	NA	NA	NA	NA	NA	67366745	67358761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67358956_67359853_67359995_67361083_67361193_67362000_67362076_67362745_67362850_67366671
ENSMUSG00000062526.5_67358898_67370471_1	chr18	-	647	7	FSM	ENSMUSG00000062526.5	ENST00000309976.13	1244	7	198	399	198	-399	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGCTGACCATGTACGGT	NA	NA	NA	NA	NA	NA	NA	NA	67370471	67358897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_67358956_67359853_67359995_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420
ENSMUSG00000062526.5_67359853_67366783_1	chr18	-	665	6	ISM	ENSMUSG00000062526.5	ENST00000557286.2	911	7	3886	0	3886	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACGTAAACCTTTATTATT	NA	NA	NA	NA	NA	NA	NA	NA	67366783	67359852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67359995_67360667_67360791_67361083_67361193_67362000_67362076_67362745_67362850_67366671
ENSMUSG00000062526.5_67359961_67370462_1	chr18	-	596	7	FSM	ENSMUSG00000062526.5	ENST00000557286.2	911	7	207	108	207	-108	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCCACACACACAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	67370462	67359960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_67359995_67360667_67360791_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420
ENSMUSG00000062526.5_67360715_67370541_1	chr18	-	594	6	ISM	ENSMUSG00000062526.5	ENST00000557286.2	911	7	128	862	128	-862	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTGAGGAGAAATATGAT	NA	NA	NA	NA	NA	NA	NA	NA	67370541	67360714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67360791_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420
ENSMUSG00000062526.5_67360773_67370589_1	chr18	-	584	6	ISM	ENSMUSG00000062526.5	ENST00000557286.2	911	7	80	920	80	-920	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCGATGCTAACTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	67370589	67360772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67360791_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420
ENSMUSG00000062526.5_67361084_67370642_1	chr18	-	619	5	ISM	ENSMUSG00000062526.5	ENST00000557286.2	911	7	27	1231	27	-1231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGAGACCTCTGCGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	67370642	67361083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420
ENSMUSG00000062590.14_86087796_86104640_1	chr1	+	751	6	FSM	ENSMUSG00000094638.2	ENST00000440107.6	832	6	81	0	81	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	943	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATGAGAGACGGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	86087795	86104640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_86087846_86090386_86090558_86092417_86092574_86097631_86097743_86101278_86101437_86104535
ENSMUSG00000062590.14_86087796_86118824_1	chr1	+	985	9	ISM	ENSMUSG00000062590.14	ENST00000436339.6	1720	16	81	22003	81	-22003	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAAGAGGCAGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	86087795	86118824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86087846_86090386_86090558_86092417_86092574_86097631_86097743_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731
ENSMUSG00000062590.14_86087796_86122091_1	chr1	+	931	8	ISM	ENSMUSG00000062590.14	ENST00000683553.1	1677	15	81	50300	81	-18736	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACGATGTTTTCCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	86087795	86122091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86087846_86090386_86090558_86092417_86092574_86097631_86097743_86101278_86101437_86104535_86104635_86118731_86118825_86121998
ENSMUSG00000062590.14_86087796_86130287_1	chr1	+	1394	13	ISM	ENSMUSG00000062590.14	ENST00000682002.1	1725	16	81	42104	81	-10540	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGGATGTCATAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	86087795	86130287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86087846_86090386_86090558_86092417_86092574_86097631_86097743_86101278_86101437_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211
ENSMUSG00000062590.14_86090460_86140828_1	chr1	+	1418	14	ISM	ENSMUSG00000062590.14	ENST00000682002.1	1725	16	2745	31563	2745	1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGAAGGCTCTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	86090459	86140828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86090558_86092417_86092574_86097631_86097743_86101278_86101437_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771
ENSMUSG00000062590.14_86090510_86126002_1	chr1	+	919	9	ISM	ENSMUSG00000062590.14	ENST00000683553.1	1677	15	2795	46389	2795	-14825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCTGATCGACCTAC	NA	NA	NA	NA	NA	NA	NA	NA	86090509	86126002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86090558_86092417_86092574_86097631_86097743_86101278_86101437_86104535_86104635_86118731_86118825_86121998_86122090_86124040_86124165_86125963
ENSMUSG00000062590.14_86090520_86124083_1	chr1	+	936	10	ISM	ENSMUSG00000062590.14	ENST00000436339.6	1720	16	2805	16744	2805	-16744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGAAGGCTCAAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	86090519	86124083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86090558_86092417_86092574_86097631_86097743_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040
ENSMUSG00000062590.14_86092417_86126104_1	chr1	+	974	8	ISM	ENSMUSG00000062590.14	ENST00000683553.1	1677	15	4702	46287	4702	-14723	internal_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCACAGCCCCCCAATAAC	NA	NA	NA	NA	NA	NA	NA	NA	86092416	86126104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86092574_86097631_86097743_86101278_86101437_86104535_86104635_86118731_86118825_86121998_86122090_86124040_86124165_86125963
ENSMUSG00000062590.14_86092417_86172392_1	chr1	+	1425	14	ISM	ENSMUSG00000062590.14	ENST00000682002.1	1725	16	4702	-1	4702	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACACGAGCCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	86092416	86172392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86092574_86097631_86097743_86101278_86101437_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287
ENSMUSG00000062590.14_86092487_86172362_1	chr1	+	1322	14	NNC	ENSMUSG00000062590.14	novel	1725	16	NA	NA	4772	-29	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1845	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGCTTCTAACCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	86092486	86172362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_86092574_86097631_86097743_86101278_86101437_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140774_86140828_86172287
ENSMUSG00000062590.14_86092493_86172353_1	chr1	+	1295	13	NNC	ENSMUSG00000062590.14	novel	1725	16	NA	NA	4778	-38	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAGGCGAGAAGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	86092492	86172353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_86092574_86097631_86097743_86101278_86101457_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287
ENSMUSG00000062590.14_86092516_86125999_1	chr1	+	917	10	ISM	ENSMUSG00000062590.14	ENST00000436339.6	1720	16	4801	14828	4801	-14828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTCTGGCTGATCGACC	NA	NA	NA	NA	NA	NA	NA	NA	86092515	86125999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86092574_86097631_86097743_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963
ENSMUSG00000062590.14_86092533_86172392_1	chr1	+	1306	14	NNC	ENSMUSG00000062590.14	novel	2030	18	NA	NA	4818	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACACGAGCCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	86092532	86172392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_86092574_86097631_86097743_86101278_86101437_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172290
ENSMUSG00000062590.14_86097627_86130287_1	chr1	+	974	9	ISM	ENSMUSG00000062590.14	ENST00000683553.1	1677	15	9912	42104	9912	-10540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGGATGTCATAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	86097626	86130287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86097743_86101278_86101437_86104535_86104635_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211
ENSMUSG00000062590.14_86097627_86172392_1	chr1	+	1272	13	NNC	ENSMUSG00000062590.14	novel	2030	18	NA	NA	9912	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACACGAGCCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	86097626	86172392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_86097743_86101278_86101437_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125964_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287
ENSMUSG00000062590.14_86101279_86130286_1	chr1	+	1004	10	ISM	ENSMUSG00000062590.14	ENST00000436339.6	1720	16	13564	10541	13564	-10541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGGATGTCATAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	86101278	86130286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211
ENSMUSG00000062590.14_86101348_86126014_1	chr1	+	694	8	ISM	ENSMUSG00000062590.14	ENST00000436339.6	1720	16	13633	14813	13633	-14813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACCTACTGAAGGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	86101347	86126014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963
ENSMUSG00000062590.14_86101403_86135727_1	chr1	+	933	11	ISM	ENSMUSG00000062590.14	ENST00000436339.6	1720	16	13688	5100	13688	-5100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCCAGATAGAGTTTATCA	NA	NA	NA	NA	NA	NA	NA	NA	86101402	86135727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674
ENSMUSG00000062590.14_86104535_86140827_1	chr1	+	994	11	ISM	ENSMUSG00000062590.14	ENST00000436339.6	1720	16	16820	0	16820	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGAAGGCTCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	86104534	86140827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771
ENSMUSG00000062590.14_86104535_86172392_1	chr1	+	952	10	ISM	ENSMUSG00000062590.14	ENST00000683553.1	1677	15	16820	-1	16820	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACACGAGCCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	86104534	86172392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86104635_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287
ENSMUSG00000062590.14_86126069_86180114_1	chr1	+	576	7	ISM	ENSMUSG00000062590.14	ENST00000682334.1	2030	18	38354	68	38354	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTCGGGATACAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	86126068	86180114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179977
ENSMUSG00000062604.12_23711355_23729337_1	chr5	-	1928	6	ISM	ENSMUSG00000062604.12	ENSMUST00000088392.9	6491	15	92195	3093	92195	-3093	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCTTTTAGAAGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	23729337	23711354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145
ENSMUSG00000062604.12_23711500_23729451_1	chr5	-	1897	6	ISM	ENSMUSG00000062604.12	ENSMUST00000088392.9	6491	15	92081	3238	92081	-3238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCCATGAATGAGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	23729451	23711499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145
ENSMUSG00000062604.12_23711797_23730625_1	chr5	-	1894	7	ISM	ENSMUSG00000062604.12	ENSMUST00000088392.9	6491	15	90907	3535	90907	-3535	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTTTAAAGTATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	23730625	23711796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493
ENSMUSG00000062604.12_23730562_23880965_1	chr5	-	1083	10	FSM	ENSMUSG00000062604.12	ENST00000523408.1	1043	10	-39	-1	-39	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGGAGGTGACACTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	23880965	23730561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ENSMUSG00000062646.13_120241894_120291753_1	chr2	+	2682	22	FSM	ENSMUSG00000062646.13	ENST00000318010.12	2748	22	-20	86	-20	-86	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGCATCCTCAGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	120241893	120291753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_120242025_120249838_120249967_120252505_120252686_120254179_120254226_120258210_120258278_120259281_120259379_120261035_120261217_120261421_120261576_120264102_120264339_120265743_120265871_120267102_120267183_120269780_120269925_120271984_120272082_120274618_120274721_120276779_120277024_120278868_120278934_120281301_120281379_120283073_120283149_120286473_120286588_120287688_120287802_120288523_120288609_120291614
ENSMUSG00000062647.17_26800776_26803224_1	chr2	+	808	8	FSM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	0	106	0	-106	multi-exon	FALSE	canonical	NA	NA	NA	NA	1986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAATTGCCAAGCTGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	26800775	26803224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
ENSMUSG00000062647.17_26801018_26803330_1	chr2	+	842	7	NNC	ENSMUSG00000062647.17	novel	914	8	NA	NA	242	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGGTTATTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	26801017	26803330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_26801139_26801438_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
ENSMUSG00000062647.17_26801018_26803330_2	chr2	+	839	7	NNC	ENSMUSG00000062647.17	novel	914	8	NA	NA	242	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGGTTATTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	26801017	26803330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_26801139_26801433_26801584_26802038_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
ENSMUSG00000062647.17_26801018_26803330_3	chr2	+	847	7	ISM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	242	0	242	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGGTTATTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	26801017	26803330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
ENSMUSG00000062661.7_31135835_31182331_1	chr2	+	983	8	FSM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	0	3670	0	-3670	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACCGCAGCCTGACACC	NA	NA	NA	NA	NA	NA	NA	NA	31135834	31182331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_31136255_31160623_31160649_31170677_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
ENSMUSG00000062661.7_31136178_31182676_1	chr2	+	985	8	FSM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	343	3325	343	-3325	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAAGGCCTCTGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	31136177	31182676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_31136255_31160623_31160649_31170677_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
ENSMUSG00000062661.7_31160627_31182784_1	chr2	+	1013	7	ISM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	24792	3217	24792	-3217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGATAACAGTATTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	31160626	31182784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31160649_31170677_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
ENSMUSG00000062661.7_31170726_31182835_1	chr2	+	994	6	ISM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	34891	3166	34891	-3166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCATATATAATCGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	31170725	31182835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
ENSMUSG00000062661.7_31170760_31182902_1	chr2	+	1027	6	ISM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	34925	3099	34925	-3099	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCAGGATGCTGGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	31170759	31182902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
ENSMUSG00000062661.7_31174159_31183123_1	chr2	+	1112	4	ISM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	38324	2878	38324	-2878	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTCTCCTTGGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	31174158	31183123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31174248_31174673_31174752_31177298_31177416_31182295
ENSMUSG00000062683.12_102571299_102576217_1	chr15	-	608	4	FSM	ENSMUSG00000062683.12	ENST00000429083.1	425	4	-33	-150	-33	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	102576217	102571298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_102571564_102573488_102573683_102574197_102574271_102576141
ENSMUSG00000062683.12_102571299_102579562_1	chr15	-	715	5	FSM	ENSMUSG00000062683.12	ENST00000394349.9	636	5	-79	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	102579562	102571298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_102571564_102573488_102573683_102574197_102574271_102576141_102576215_102579452
ENSMUSG00000062683.12_102571299_102579562_2	chr15	-	726	5	NNC	ENSMUSG00000062683.12	novel	731	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	102579562	102571298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_102571564_102573488_102573683_102574197_102574286_102576145_102576215_102579452
ENSMUSG00000062691.11_79223929_79227615_1	chr17	+	482	5	FSM	ENSMUSG00000062691.11	ENSMUST00000180077.7	602	5	0	120	0	-120	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATTTTATGAAAGAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	79223928	79227615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_79223955_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ENSMUSG00000062691.11_79224081_79227469_1	chr17	+	352	5	FSM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	135	266	135	-266	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTACCCGGGACTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	79224080	79227469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_79224123_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ENSMUSG00000062691.11_79225784_79227615_1	chr17	+	458	4	ISM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	1838	120	1838	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATTTTATGAAAGAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	79225783	79227615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_79225902_79226484_79226530_79227187_79227273_79227405
ENSMUSG00000062729.13_171104565_171107794_1	chr1	-	1242	10	ISM	ENSMUSG00000062729.13	ENSMUST00000073120.11	1821	13	966	0	832	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	171107794	171104564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713
ENSMUSG00000062729.13_171104715_171108096_1	chr1	-	1262	11	ISM	ENSMUSG00000062729.13	ENSMUST00000073120.11	1821	13	664	150	530	-85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGAGGGGGTTGCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	171108096	171104714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171107830_171107961
ENSMUSG00000062729.13_171104859_171107988_1	chr1	-	220	3	ISM	ENSMUSG00000062729.13	ENST00000544598.5	665	6	638	229	638	-229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTGGGCGAGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	171107988	171104858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171104902_171105019_171105170_171107961
ENSMUSG00000062729.13_171105020_171108342_1	chr1	-	1256	10	ISM	ENSMUSG00000062729.13	ENSMUST00000073120.11	1821	13	418	455	284	-390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCAAACTTACTCATT	NA	NA	NA	NA	NA	NA	NA	NA	171108342	171105019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171107830_171107961_171108097_171108247
ENSMUSG00000062729.13_171105312_171108545_1	chr1	-	1160	10	ISM	ENSMUSG00000062729.13	ENSMUST00000073120.11	1821	13	215	747	81	-682	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTCCTGAACAGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	171108545	171105311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
ENSMUSG00000062729.13_171108042_171108570_1	chr1	-	193	3	ISM	ENSMUSG00000062729.13	ENST00000544598.5	665	6	56	3412	56	-3412	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGATGGTGCGATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	171108570	171108041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_171108097_171108247_171108343_171108527
ENSMUSG00000062753.15_27782743_27783229_1	chr17	-	355	2	ISM	ENSMUSG00000062753.15	ENSMUST00000232276.2	860	5	1411	0	1411	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCCTCCTTGGGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	27783229	27782742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27782991_27783122
ENSMUSG00000062753.15_27782868_27783589_1	chr17	-	309	4	ISM	ENSMUSG00000062753.15	ENSMUST00000232276.2	860	5	1051	125	1051	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACAGCTGGCCCCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	27783589	27782867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535
ENSMUSG00000062753.15_27782921_27783649_1	chr17	-	316	4	ISM	ENSMUSG00000062753.15	ENSMUST00000232276.2	860	5	991	178	991	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACTCCACCACTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	27783649	27782920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535
ENSMUSG00000062753.15_27782962_27783724_1	chr17	-	350	4	ISM	ENSMUSG00000062753.15	ENSMUST00000232276.2	860	5	916	219	916	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAAGCGGATGCCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	27783724	27782961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535
ENSMUSG00000062753.15_27783120_27784641_2	chr17	-	332	4	ISM	ENSMUSG00000062753.15	ENSMUST00000154473.9	862	5	89	573	0	-373	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACATTTCTGGCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	27784641	27783119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27783229_27783358_27783385_27783535_27783725_27784633
ENSMUSG00000062761.8_31627721_31637401_1	chr5	+	792	7	ISM	ENSMUSG00000062761.8	ENSMUST00000076264.8	3299	14	17942	1697	17861	-1692	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGCAGCACGGAAGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	31627720	31637401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ENSMUSG00000062762.18_36690893_36693713_1	chr9	-	750	2	ISM	ENSMUSG00000062762.18	ENST00000527235.6	1487	9	10930	0	10930	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAAAGGAGTGGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	36693713	36690892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36691566_36693636
ENSMUSG00000062762.18_36691029_36695875_1	chr9	-	724	3	ISM	ENSMUSG00000062762.18	ENST00000527235.6	1487	9	8768	136	8768	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGAAGCACATACATTG	NA	NA	NA	NA	NA	NA	NA	NA	36695875	36691028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36691566_36693636_36693712_36695763
ENSMUSG00000062762.18_36691174_36697357_1	chr9	-	825	5	ISM	ENSMUSG00000062762.18	ENST00000527235.6	1487	9	7286	281	7286	-281	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGACTGATTGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	36697357	36691173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36691566_36693636_36693712_36695763_36695876_36696828_36696949_36697231
ENSMUSG00000062762.18_36691312_36697846_1	chr9	-	754	6	ISM	ENSMUSG00000062762.18	ENST00000527235.6	1487	9	6797	419	6797	-419	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCAAGGGCCCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	36697846	36691311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36691566_36693636_36693712_36695763_36695876_36696828_36696949_36697231_36697357_36697778
ENSMUSG00000062762.18_36691473_36701222_1	chr9	-	800	8	ISM	ENSMUSG00000062762.18	ENST00000527235.6	1487	9	3421	580	3421	-580	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTCTGCAGAGAAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	36701222	36691472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36691566_36693636_36693712_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075
ENSMUSG00000062762.18_36693650_36704581_1	chr9	-	739	8	ISM	ENSMUSG00000062762.18	ENST00000527235.6	1487	9	62	2757	62	-2757	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGAAAAGCATAGTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	36704581	36693649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_36693712_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535
ENSMUSG00000062778.13_106036241_106038055_1	chr3	+	217	2	ISM	ENSMUSG00000062778.13	ENST00000451398.6	1004	7	7288	1282	7288	-1282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCCAGCTCCTTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	106036240	106038055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_106036337_106037934
ENSMUSG00000062778.13_106036305_106038181_1	chr3	+	193	3	ISM	ENSMUSG00000062778.13	ENST00000451398.6	1004	7	7352	1156	7352	-1156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCCATTGACCTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	106036304	106038181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_106036337_106037934_106038055_106038140
ENSMUSG00000062778.13_106038140_106039123_1	chr3	+	178	2	ISM	ENSMUSG00000062778.13	ENST00000451398.6	1004	7	9187	214	9187	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTCCTCCAGGAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	106038139	106039123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_106038283_106039088
ENSMUSG00000062778.13_106038195_106039170_1	chr3	+	170	2	ISM	ENSMUSG00000062778.13	ENST00000451398.6	1004	7	9242	167	9242	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGAGGCAGTGGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	106038194	106039170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_106038283_106039088
ENSMUSG00000062778.13_106038243_106039223_1	chr3	+	175	2	ISM	ENSMUSG00000062778.13	ENST00000451398.6	1004	7	9290	114	9290	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGACAGAAATGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106038242	106039223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_106038283_106039088
ENSMUSG00000062797.15_89572898_89585137_1	chr7	-	229	2	ISM	ENSMUSG00000062797.15	ENSMUST00000075010.12	715	6	5093	4770	5093	-4770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGAATATTGTGCGAAC	NA	NA	NA	NA	NA	NA	NA	NA	89585137	89572897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_89572924_89584934
ENSMUSG00000062825.16_120236859_120237536_1	chr11	-	575	2	ISM	ENSMUSG00000062825.16	ENSMUST00000106215.11	1827	5	1381	342	1381	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTAACCAACAGCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	120237536	120236858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120237360_120237462
ENSMUSG00000062825.16_120237208_120237536_1	chr11	-	226	2	ISM	ENSMUSG00000062825.16	ENSMUST00000106215.11	1827	5	1381	691	1381	9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1392	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGTGCCAGGCATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	120237536	120237207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120237360_120237462
ENSMUSG00000062825.16_120237208_120237935_1	chr11	-	533	3	ISM	ENSMUSG00000062825.16	ENSMUST00000106215.11	1827	5	982	691	982	9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGTGCCAGGCATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	120237935	120237207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120237360_120237462_120237645_120237736
ENSMUSG00000062825.16_120237271_120237645_1	chr11	-	272	2	ISM	ENSMUSG00000062825.16	ENSMUST00000106215.11	1827	5	1272	754	1272	-54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2606	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCAGGAGTATGATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	120237645	120237270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120237360_120237462
ENSMUSG00000062825.16_120237562_120237817_1	chr11	-	164	2	ISM	ENSMUSG00000062825.16	ENSMUST00000106215.11	1827	5	1100	1045	1100	-345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACAGTGCTGTCTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	120237817	120237561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120237645_120237736
ENSMUSG00000062825.16_120237562_120238555_1	chr11	-	616	3	ISM	ENSMUSG00000062825.16	ENSMUST00000106215.11	1827	5	362	1045	362	-345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14560	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACAGTGCTGTCTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	120238555	120237561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120237645_120237736_120238176_120238461
ENSMUSG00000062825.16_120238085_120238531_1	chr11	-	161	2	ISM	ENSMUSG00000062825.16	ENSMUST00000106215.11	1827	5	386	1568	386	-868	internal_fragment	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGACTCTGGTGACGGG	NA	NA	NA	NA	NA	NA	NA	NA	120238531	120238084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120238176_120238461
ENSMUSG00000062825.16_120238085_120238594_1	chr11	-	224	2	ISM	ENSMUSG00000062825.16	ENSMUST00000106215.11	1827	5	323	1568	323	-868	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2003	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGACTCTGGTGACGGG	NA	NA	NA	NA	NA	NA	NA	NA	120238594	120238084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120238176_120238461
ENSMUSG00000062825.16_120238139_120238660_1	chr11	-	236	2	ISM	ENSMUSG00000062825.16	ENSMUST00000106215.11	1827	5	257	1622	257	-922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1963	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCATTCAGGCGGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	120238660	120238138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120238176_120238461
ENSMUSG00000062825.16_120238546_120238917_1	chr11	-	279	2	ISM	ENSMUSG00000062825.16	ENSMUST00000106215.11	1827	5	0	2029	0	-1329	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGTGTGGCTCCTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	120238917	120238545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120238702_120238794
ENSMUSG00000062825.16_120238665_120239296_1	chr11	-	212	3	ISM	ENSMUSG00000062825.16	ENSMUST00000062147.14	876	5	5	1806	5	-1448	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGACGAGGCCCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	120239296	120238664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120238702_120238794_120238924_120239250
ENSMUSG00000062825.16_120238794_120239368_1	chr11	-	248	2	ISM	ENSMUSG00000062825.16	ENSMUST00000062147.14	876	5	-67	1935	0	-1577	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1871	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTGAGAGGAGTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	120239368	120238793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_120238924_120239250
ENSMUSG00000062866.17_13089529_13108301_1	chr10	-	585	3	ISM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	91732	390	91732	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGGTAGCTGAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	13108301	13089528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13090018_13100527_13100605_13108282
ENSMUSG00000062866.17_13089573_13108366_1	chr10	-	606	3	ISM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	91667	434	91667	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATGAAGAGAAGAAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	13108366	13089572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13090018_13100527_13100605_13108282
ENSMUSG00000062866.17_13089800_13121192_1	chr10	-	589	6	ISM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	78841	661	78841	141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTGCCCACCACCGT	NA	NA	NA	NA	NA	NA	NA	NA	13121192	13089799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154
ENSMUSG00000062866.17_13089831_13121281_1	chr10	-	647	6	ISM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	78752	692	78752	110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCAAGAAGCTGAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	13121281	13089830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154
ENSMUSG00000062866.17_13090002_13137668_1	chr10	-	1397	9	ISM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	62365	863	62365	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCGTGGAACTGCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	13137668	13090001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509
ENSMUSG00000062866.17_13090002_13137670_1	chr10	-	1394	9	NNC	ENSMUSG00000062866.17	novel	1934	13	NA	NA	62363	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCGTGGAACTGCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	13137670	13090001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109951_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509
ENSMUSG00000062866.17_13100526_13142797_1	chr10	-	1464	9	ISM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	57236	11387	57236	-10524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1023	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAGACAAGATTTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	13142797	13100525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716
ENSMUSG00000062866.17_13108379_13167625_1	chr10	-	1371	9	NNC	ENSMUSG00000062866.17	novel	2735	12	NA	NA	32408	-18377	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGCGGTTCAATGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	13167625	13108378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_13108421_13109893_13109951_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538
ENSMUSG00000062866.17_13108379_13167625_2	chr10	-	1371	9	NNC	ENSMUSG00000062866.17	novel	2735	12	NA	NA	32408	-18377	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGCGGTTCAATGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	13167625	13108378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_13108416_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538
ENSMUSG00000062866.17_13108379_13167625_3	chr10	-	1376	9	ISM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	32408	19240	32408	-18377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGCGGTTCAATGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	13167625	13108378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538
ENSMUSG00000062866.17_13109894_13264531_1	chr10	-	1508	9	ISM	ENSMUSG00000062866.17	ENST00000305766.10	1843	12	43	19953	-34	-19892	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTGTCATGACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	13264531	13109893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13264438
ENSMUSG00000062866.17_13115654_13264531_1	chr10	-	1446	8	ISM	ENSMUSG00000062866.17	ENST00000305766.10	1843	12	43	25713	-34	-25652	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATCTGATGCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	13264531	13115653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13264438
ENSMUSG00000062866.17_13121154_13264531_1	chr10	-	1385	7	NNC	ENSMUSG00000062866.17	novel	1843	12	NA	NA	-34	-31152	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGCTGGGGTGTGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	13264531	13121153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142792_13167538_13167707_13264438
ENSMUSG00000062866.17_13129478_13349845_1	chr10	-	600	5	ISM	ENSMUSG00000062866.17	ENST00000367584.8	2419	12	254	39949	254	-39476	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGCAAGCAGCCGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	13349845	13129477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13349799
ENSMUSG00000062866.17_13129534_13349911_1	chr10	-	610	5	ISM	ENSMUSG00000062866.17	ENST00000367584.8	2419	12	188	40005	188	-39532	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTCACTGGCTGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	13349911	13129533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13349799
ENSMUSG00000062866.17_13129589_13349961_1	chr10	-	605	5	ISM	ENSMUSG00000062866.17	ENST00000367584.8	2419	12	138	40060	138	-39587	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCGTCAGCCTCACCGTC	NA	NA	NA	NA	NA	NA	NA	NA	13349961	13129588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13349799
ENSMUSG00000062867.14_108437485_108442783_1	chr9	+	1852	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGTTCAATGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	108437484	108442783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439051_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUSG00000062867.14_108437485_108442783_2	chr9	+	1853	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGTTCAATGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	108437484	108442783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442305_108442445_108442525_108442610_108442696
ENSMUSG00000062867.14_108437485_108442783_4	chr9	+	1853	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2021	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGTTCAATGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	108437484	108442783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442440_108442525_108442610_108442696
ENSMUSG00000062867.14_108437485_108442783_5	chr9	+	1851	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGTTCAATGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	108437484	108442783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442703
ENSMUSG00000062867.14_108437485_108442783_6	chr9	+	1853	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1905	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGTTCAATGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	108437484	108442783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440339_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUSG00000062867.14_108437485_108442783_7	chr9	+	1852	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGTTCAATGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	108437484	108442783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440529_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUSG00000062867.14_108437679_108442174_1	chr9	+	1311	11	ISM	ENSMUSG00000062867.14	ENST00000678724.1	1673	14	23	598	23	-598	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAACATCTCAGCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	108437678	108442174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108437831_108438232_108438282_108438795_108438898_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441111_108441184_108441833_108441978_108442064
ENSMUSG00000062867.14_108439372_108442612_1	chr9	+	1275	10	ISM	ENSMUSG00000062867.14	ENST00000678724.1	1673	14	1716	160	1716	-160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGCCCCTATGCTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	108439371	108442612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441111_108441184_108441833_108441978_108442064_108442210_108442300_108442445_108442525
ENSMUSG00000062867.14_108439478_108442763_1	chr9	+	1233	11	ISM	ENSMUSG00000062867.14	ENST00000678724.1	1673	14	1822	9	1822	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGACAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	108439477	108442763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441111_108441184_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUSG00000062901.4_19926321_19936685_1	chr16	+	445	4	ISM	ENSMUSG00000062901.4	ENST00000476808.1	1686	6	847	18533	847	-11286	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCGTTGGACGGAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	19926320	19936685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_19926394_19933310_19933496_19934633_19934753_19936617
ENSMUSG00000062901.4_19933431_19938910_1	chr16	+	424	4	ISM	ENSMUSG00000062901.4	ENST00000476808.1	1686	6	7957	16308	7957	-9061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATCGCCAAGAGGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	19933430	19938910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_19933496_19934633_19934753_19936617_19936807_19938859
ENSMUSG00000062901.4_19933476_19938967_1	chr16	+	436	4	ISM	ENSMUSG00000062901.4	ENST00000476808.1	1686	6	8002	16251	8002	-9004	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGCTGACCAAGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	19933475	19938967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_19933496_19934633_19934753_19936617_19936807_19938859
ENSMUSG00000062901.4_19936618_19955218_1	chr16	+	462	3	ISM	ENSMUSG00000062901.4	ENST00000476808.1	1686	6	11144	0	11144	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAGCTCTCAAGAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	19936617	19955218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_19936807_19938859_19939092_19955177
ENSMUSG00000062906.13_89010029_89011423_1	chr15	-	526	6	ISM	ENSMUSG00000062906.13	ENST00000349505.4	957	10	1099	-2	1099	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTATGGCTTGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	89011423	89010028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89010094_89010177_89010285_89010414_89010505_89010843_89010910_89011071_89011199_89011352
ENSMUSG00000062906.13_89010843_89012221_1	chr15	-	563	6	ISM	ENSMUSG00000062906.13	ENST00000349505.4	957	10	301	812	301	-812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTGTGGTGGGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	89012221	89010842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89010910_89011071_89011199_89011352_89011422_89011588_89011694_89011796_89011895_89012124
ENSMUSG00000062906.13_89011150_89012453_1	chr15	-	484	6	ISM	ENSMUSG00000062906.13	ENST00000349505.4	957	10	69	1119	69	-1119	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCCAGAGTCTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	89012453	89011149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89011199_89011352_89011422_89011588_89011694_89011796_89011895_89012124_89012222_89012387
ENSMUSG00000062908.13_153627994_153631415_1	chr3	-	760	2	ISM	ENSMUSG00000062908.13	ENST00000370834.9	1248	10	13390	-563	13390	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGACTCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	153631415	153627993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_153628640_153631301
ENSMUSG00000062908.13_153628208_153635225_1	chr3	-	739	3	ISM	ENSMUSG00000062908.13	ENST00000370834.9	1248	10	9580	-349	9580	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGACACGTCAGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	153635225	153628207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_153628640_153631301_153631551_153635167
ENSMUSG00000062908.13_153628369_153635994_1	chr3	-	757	4	ISM	ENSMUSG00000062908.13	ENST00000370834.9	1248	10	8811	-188	8811	188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAATGATTGGTCCTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	153635994	153628368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853
ENSMUSG00000062908.13_153628556_153642062_1	chr3	-	810	6	ISM	ENSMUSG00000062908.13	ENST00000370834.9	1248	10	2743	-1	2743	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	923	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACGATGCATCACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	153642062	153628555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931
ENSMUSG00000062908.13_153631304_153643446_1	chr3	-	831	6	ISM	ENSMUSG00000062908.13	ENST00000370834.9	1248	10	1359	2747	1359	-2747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGCCCTAACGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	153643446	153631303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339
ENSMUSG00000062908.13_153631445_153644603_1	chr3	-	835	8	ISM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	5666	3451	202	-2888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	916	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTATGCCTCGATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	153644603	153631444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533
ENSMUSG00000062908.13_153635168_153644804_1	chr3	-	827	8	ISM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	5465	7174	1	-6611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	916	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATCTCCCTCCTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	153644804	153635167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706
ENSMUSG00000062908.13_153635969_153650079_1	chr3	-	751	9	ISM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	190	7975	190	-7412	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACCAGAGGAATTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	153650079	153635968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
ENSMUSG00000062908.13_153641942_153650269_1	chr3	-	796	7	ISM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	0	13948	0	-13385	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAACTGGTAGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	153650269	153641941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
ENSMUSG00000062929.9_54907265_54908199_1	chr12	-	836	2	ISM	ENSMUSG00000062929.9	ENST00000672163.1	1410	4	763	23	616	-23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGTGTACACTACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	54908199	54907264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54908023_54908121
ENSMUSG00000062929.9_54907377_54908405_1	chr12	-	818	3	ISM	ENSMUSG00000062929.9	ENST00000672163.1	1410	4	557	135	410	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAATTAAGTTTTATTACC	NA	NA	NA	NA	NA	NA	NA	NA	54908405	54907376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_54908023_54908121_54908199_54908310
ENSMUSG00000062929.9_54907715_54909583_1	chr12	-	748	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	79	2113	79	-473	multi-exon	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGCCTTCCTGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	54909583	54907714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
ENSMUSG00000062929.9_54907725_54908826_1	chr12	-	791	4	FSM	ENSMUSG00000062929.9	ENST00000672163.1	1410	4	136	483	-11	-483	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCCCAAGGAATGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	54908826	54907724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54908718
ENSMUSG00000062929.9_54907835_54908903_1	chr12	-	758	4	FSM	ENSMUSG00000062929.9	ENST00000672163.1	1410	4	59	593	57	-593	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTGTTTTTTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	54908903	54907834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54908718
ENSMUSG00000062929.9_54907970_54908792_1	chr12	-	512	4	FSM	ENSMUSG00000062929.9	ENST00000672163.1	1410	4	170	728	23	-728	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCTGGGAGAGAAACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	54908792	54907969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54908718
ENSMUSG00000062931.16_82061843_82063759_1	chr10	-	773	3	ISM	ENSMUSG00000062931.16	ENSMUST00000041264.15	2035	4	13348	1159	13348	-1159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAATACTAGAGACACAA	NA	NA	NA	NA	NA	NA	NA	NA	82063759	82061842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_82062428_82063364_82063426_82063632
ENSMUSG00000062937.8_89055359_89099318_1	chr4	+	2787	8	NNC	ENSMUSG00000062937.8	novel	2797	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATCAGATTATACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	89055358	89099318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090391_89090622_89095039_89095163_89097704
ENSMUSG00000062937.8_89055359_89099318_2	chr4	+	2790	8	NNC	ENSMUSG00000062937.8	novel	2797	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATCAGATTATACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	89055358	89099318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095046_89095163_89097704
ENSMUSG00000062937.8_89055359_89099318_3	chr4	+	2791	8	NNC	ENSMUSG00000062937.8	novel	2797	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATCAGATTATACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	89055358	89099318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_89055756_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
ENSMUSG00000062937.8_89055359_89099318_4	chr4	+	2788	8	NNC	ENSMUSG00000062937.8	novel	2797	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1826	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATCAGATTATACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	89055358	89099318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_89055762_89066425_89066513_89070245_89070305_89074691_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
ENSMUSG00000062939.12_52050947_52146156_1	chr1	+	2300	22	FSM	ENSMUSG00000062939.12	ENST00000392320.7	2483	22	8	175	8	-175	multi-exon	TRUE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCACAATTTATTTCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	52050946	52146156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_52051071_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122122_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
ENSMUSG00000062939.12_52050950_52146156_1	chr1	+	2297	22	FSM	ENSMUSG00000062939.12	ENST00000392320.7	2483	22	11	175	11	-175	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCACAATTTATTTCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	52050949	52146156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_52051071_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122122_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
ENSMUSG00000062939.12_52050950_52146168_1	chr1	+	2308	22	NNC	ENSMUSG00000062939.12	novel	2483	22	NA	NA	11	-163	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCGGCTTTGTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	52050949	52146168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_52051071_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122122_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141011_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
ENSMUSG00000062939.12_52051000_52146205_1	chr1	+	2296	22	FSM	ENSMUSG00000062939.12	ENST00000392320.7	2483	22	61	126	61	-126	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAAGTTGGAAGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	52050999	52146205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_52051071_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122122_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
ENSMUSG00000062939.12_52051003_52146212_1	chr1	+	2300	22	FSM	ENSMUSG00000062939.12	ENST00000392320.7	2483	22	64	119	64	-119	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGAAGCTCTCTTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	52051002	52146212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_52051071_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122122_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
ENSMUSG00000062939.12_52051012_52146216_1	chr1	+	2289	22	NNC	ENSMUSG00000062939.12	novel	2483	22	NA	NA	73	-115	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTCTCTTCTCACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	52051011	52146216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_52051071_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122122_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144832_52144936_52146068
ENSMUSG00000062939.12_52051012_52146220_1	chr1	+	2298	22	NNC	ENSMUSG00000062939.12	novel	2483	22	NA	NA	73	-111	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTCTCACTTGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	52051011	52146220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_52051071_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122122_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141011_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
ENSMUSG00000062939.12_52051020_52146213_1	chr1	+	2284	22	FSM	ENSMUSG00000062939.12	ENST00000392320.7	2483	22	81	118	81	-118	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAAGCTCTCTTCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	52051019	52146213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_52051071_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122122_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
ENSMUSG00000062939.12_52051046_52146348_1	chr1	+	2393	22	FSM	ENSMUSG00000062939.12	ENST00000392320.7	2483	22	107	-17	107	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCTGGTTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	52051045	52146348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_52051071_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122122_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
ENSMUSG00000062939.12_52052948_52146348_1	chr1	+	2368	21	NNC	ENSMUSG00000062939.12	novel	2483	22	NA	NA	2009	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	599	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCTGGTTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	52052947	52146348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122122_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141011_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
ENSMUSG00000062939.12_52052948_52146348_2	chr1	+	2366	21	NNC	ENSMUSG00000062939.12	novel	2483	22	NA	NA	2009	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCTGGTTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	52052947	52146348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122122_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142009_52142199_52144364_52144432_52144826_52144936_52146068
ENSMUSG00000062939.12_52052948_52146348_3	chr1	+	2362	21	NNC	ENSMUSG00000062939.12	novel	2483	22	NA	NA	2009	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCTGGTTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	52052947	52146348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_52053094_52104473_52104573_52107904_52107998_52111026_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122122_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
ENSMUSG00000062939.12_52052948_52146348_4	chr1	+	2367	21	NNC	ENSMUSG00000062939.12	novel	2483	22	NA	NA	2009	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCTGGTTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	52052947	52146348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122122_52122231_52123237_52123283_52135945_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
ENSMUSG00000062980.16_21985943_21987062_1	chr6	+	638	2	FSM	ENSMUSG00000062980.16	ENST00000340646.9	584	2	-52	-2	28	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTTGAGTTTATCCT	NA	NA	NA	NA	NA	NA	NA	NA	21985942	21987062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_21986131_21986612
ENSMUSG00000062981.6_95316668_95337802_1	chr10	-	657	6	NNC	ENSMUSG00000062981.6	novel	661	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2864	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	95337802	95316667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332744_95336244_95336385_95337767
ENSMUSG00000062995.13_8630527_8758458_1	chr6	-	1662	13	ISM	ENSMUSG00000062995.13	ENSMUST00000115520.8	1876	15	19981	0	19696	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTCACTCCTGTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	8758458	8630526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_8630798_8643972_8644243_8653496_8653536_8653629_8653693_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8749694_8749768_8754588_8754752_8758365
ENSMUSG00000062995.13_8630699_8778262_1	chr6	-	1681	14	FSM	ENSMUSG00000062995.13	ENSMUST00000038403.12	2075	14	222	172	-108	-172	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACGAATTGCTCAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	8778262	8630698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_8630798_8643972_8644243_8653496_8653536_8653629_8653693_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8749694_8749768_8754588_8754752_8758365_8758459_8778071
ENSMUSG00000062995.13_8643973_8778439_1	chr6	-	1759	13	ISM	ENSMUSG00000062995.13	ENSMUST00000038403.12	2075	14	45	13446	0	-13446	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTACTACAGTGACTAG	NA	NA	NA	NA	NA	NA	NA	NA	8778439	8643972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_8644243_8653496_8653536_8653629_8653693_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8749694_8749768_8754588_8754752_8758365_8758459_8778071
ENSMUSG00000062997.7_38891592_38895433_1	chr2	-	737	4	NNC	ENSMUSG00000062997.7	novel	946	4	NA	NA	203	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTCATGTTTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	38895433	38891591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_38891772_38894118_38894201_38894743_38894881_38895095
ENSMUSG00000062997.7_38891592_38895433_2	chr2	-	743	4	FSM	ENSMUSG00000062997.7	ENSMUST00000080861.6	946	4	203	0	203	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTCATGTTTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	38895433	38891591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_38891778_38894118_38894201_38894743_38894881_38895095
ENSMUSG00000062997.7_38891592_38895493_1	chr2	-	803	4	FSM	ENSMUSG00000062997.7	ENSMUST00000080861.6	946	4	143	0	143	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTCATGTTTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	38895493	38891591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_38891778_38894118_38894201_38894743_38894881_38895095
ENSMUSG00000062997.7_38891592_38895493_2	chr2	-	798	4	NNC	ENSMUSG00000062997.7	novel	946	4	NA	NA	143	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTCATGTTTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	38895493	38891591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_38891778_38894118_38894196_38894743_38894881_38895095
ENSMUSG00000062997.7_38891631_38895493_1	chr2	-	764	4	FSM	ENSMUSG00000062997.7	ENSMUST00000080861.6	946	4	143	39	143	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	8885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGATGACAACGACAATAA	NA	NA	NA	NA	NA	NA	NA	NA	38895493	38891630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_38891778_38894118_38894201_38894743_38894881_38895095
ENSMUSG00000062997.7_38891631_38895636_1	chr2	-	907	4	FSM	ENSMUSG00000062997.7	ENSMUST00000080861.6	946	4	0	39	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGATGACAACGACAATAA	NA	NA	NA	NA	NA	NA	NA	NA	38895636	38891630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_38891778_38894118_38894201_38894743_38894881_38895095
ENSMUSG00000063011.8_25967587_25971348_1	chr17	-	1707	12	ISM	ENSMUSG00000063011.8	ENSMUST00000075884.8	2114	16	1940	0	1940	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	25971348	25967586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262
ENSMUSG00000063011.8_25967587_25971351_1	chr17	-	1705	12	NNC	ENSMUSG00000063011.8	novel	2114	16	NA	NA	1937	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	25971351	25967586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970955_25971262
ENSMUSG00000063011.8_25967753_25972036_1	chr17	-	1662	13	ISM	ENSMUSG00000063011.8	ENSMUST00000075884.8	2114	16	1252	166	1252	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCAGCTCTGCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	25972036	25967752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915
ENSMUSG00000063011.8_25967753_25972040_1	chr17	-	1661	13	NNC	ENSMUSG00000063011.8	novel	2114	16	NA	NA	1248	-163	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCAGCTCTGCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	25972040	25967752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970955_25971262_25971349_25971915
ENSMUSG00000063011.8_25967753_25972398_1	chr17	-	1709	14	ISM	ENSMUSG00000063011.8	ENSMUST00000237359.2	2044	17	954	164	890	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCAGCTCTGCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	25972398	25967752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351
ENSMUSG00000063011.8_25967875_25972791_1	chr17	-	1701	14	ISM	ENSMUSG00000063011.8	ENSMUST00000237359.2	2044	17	561	286	497	-285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTGGGCTGCCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	25972791	25967874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747
ENSMUSG00000063011.8_25967875_25973288_1	chr17	-	1884	15	ISM	ENSMUSG00000063011.8	ENSMUST00000237359.2	2044	17	64	286	0	-285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTGGGCTGCCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	25973288	25967874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105
ENSMUSG00000063011.8_25968040_25973288_1	chr17	-	1719	15	ISM	ENSMUSG00000063011.8	ENSMUST00000237359.2	2044	17	64	451	0	-450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTCTGGGGCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	25973288	25968039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105
ENSMUSG00000063011.8_25968422_25972398_1	chr17	-	1483	12	ISM	ENSMUSG00000063011.8	ENSMUST00000075884.8	2114	16	890	835	890	-832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGAGGTGGGGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	25972398	25968421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972049_25972351
ENSMUSG00000063011.8_25968868_25973174_1	chr17	-	1432	13	ISM	ENSMUSG00000063011.8	ENSMUST00000075884.8	2114	16	114	1281	114	-1278	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGCCTGCTCAGCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	25973174	25968867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972049_25972351_25972399_25972747_25972792_25973105
ENSMUSG00000063015.13_93330991_93335511_1	chr5	-	354	2	ISM	ENSMUSG00000063015.13	ENSMUST00000058550.15	2804	7	18843	1199	18843	-1199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAGGTGGATGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	93335511	93330990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_93331280_93335446
ENSMUSG00000063019.6_157209514_157238382_1	chr2	+	806	3	FSM	ENSMUSG00000063019.6	ENSMUST00000081202.6	1107	3	0	301	0	240	multi-exon	FALSE	canonical	NA	NA	NA	NA	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCCAGCCAGGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	157209513	157238382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_157209561_157220968_157221175_157237829
ENSMUSG00000063019.6_157215777_157237964_1	chr2	+	423	3	FSM	ENSMUSG00000063019.6	ENST00000397152.7	602	3	1	178	1	-178	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCTGCAGCCTCGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	157215776	157237964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_157215859_157220968_157221175_157237829
ENSMUSG00000063019.6_157215796_157238013_1	chr2	+	444	3	NNC	ENSMUSG00000063019.6	novel	602	3	NA	NA	20	-129	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCACAGACTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	157215795	157238013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_157215850_157220968_157221175_157237829
ENSMUSG00000063019.6_157221057_157238142_1	chr2	+	431	2	ISM	ENSMUSG00000063019.6	ENST00000397152.7	602	3	5281	0	5281	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACGGGAGATTCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	157221056	157238142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_157221175_157237829
ENSMUSG00000063019.6_157221057_157238142_2	chr2	+	428	2	NNC	ENSMUSG00000063019.6	novel	602	3	NA	NA	5281	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACGGGAGATTCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	157221056	157238142	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_157221175_157237832
ENSMUSG00000063052.10_157746148_157771799_1	chr3	+	1532	14	ISM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	3849	2325	3849	-2325	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAAGGCACAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	157746147	157771799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ENSMUSG00000063052.10_157746195_157771853_1	chr3	+	1539	14	ISM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	3896	2271	3896	-2271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACCGCTGGTTTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	157746194	157771853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ENSMUSG00000063052.10_157749277_157772073_1	chr3	+	1541	12	ISM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	6978	2051	6978	-2051	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATTTTTATAATGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	157749276	157772073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ENSMUSG00000063052.10_157754038_157772183_1	chr3	+	1600	11	ISM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	11739	1941	11739	-1941	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAACTTTTACTAAATATT	NA	NA	NA	NA	NA	NA	NA	NA	157754037	157772183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ENSMUSG00000063052.10_157758438_157772421_1	chr3	+	1534	9	ISM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	16139	1703	16139	-1703	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTACAGTAATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	157758437	157772421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ENSMUSG00000063052.10_157758466_157772506_1	chr3	+	1591	9	ISM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	16167	1618	16167	-1618	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAATTATCAGATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	157758465	157772506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ENSMUSG00000063052.10_157764333_157772847_1	chr3	+	1555	5	ISM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	22034	1277	22034	-1277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATAGACTTTTATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	157764332	157772847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ENSMUSG00000063052.10_157769396_157773171_1	chr3	+	1533	2	ISM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	27097	953	27097	-953	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATCTAAGTTAGTAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	157769395	157773171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157769507_157771749
ENSMUSG00000063052.10_157769449_157773224_1	chr3	+	1533	2	ISM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	27150	900	27150	-900	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATGTAGTTTAACTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	157769448	157773224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_157769507_157771749
ENSMUSG00000063063.13_76859039_76950893_1	chr6	-	1540	6	ISM	ENSMUSG00000063063.13	ENST00000629316.2	2021	10	170033	0	170033	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTCCTGTATCCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	76950893	76859038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_76859821_76896862_76896969_76909328_76909511_76919190_76919305_76931705_76931858_76950689
ENSMUSG00000063063.13_76859173_76957738_1	chr6	-	1473	7	ISM	ENSMUSG00000063063.13	ENST00000629316.2	2021	10	163188	134	163188	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGTATATTCATAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	76957738	76859172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_76859821_76896862_76896969_76909328_76909511_76919190_76919305_76931705_76931858_76950689_76950891_76957668
ENSMUSG00000063063.13_76859282_76958812_1	chr6	-	1473	8	ISM	ENSMUSG00000063063.13	ENST00000629316.2	2021	10	162114	243	162114	-243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGGGCAAAGAGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	76958812	76859281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_76859821_76896862_76896969_76909328_76909511_76919190_76919305_76931705_76931858_76950689_76950891_76957668_76957826_76958790
ENSMUSG00000063063.13_76859349_76958853_1	chr6	-	1447	8	ISM	ENSMUSG00000063063.13	ENST00000629316.2	2021	10	162073	310	162073	184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGAAGGGGACAGGTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	76958853	76859348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_76859821_76896862_76896969_76909328_76909511_76919190_76919305_76931705_76931858_76950689_76950891_76957668_76957826_76958790
ENSMUSG00000063063.13_76859421_76958884_1	chr6	-	1406	8	ISM	ENSMUSG00000063063.13	ENST00000629316.2	2021	10	162042	382	162042	112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTAAGAGAACAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	76958884	76859420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_76859821_76896862_76896969_76909328_76909511_76919190_76919305_76931705_76931858_76950689_76950891_76957668_76957826_76958790
ENSMUSG00000063063.13_76859533_77120926_1	chr6	-	1527	10	FSM	ENSMUSG00000063063.13	ENST00000629316.2	2021	10	0	494	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAATAGGCTACAAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	77120926	76859532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_76859821_76896862_76896969_76909328_76909511_76919190_76919305_76931705_76931858_76950689_76950891_76957668_76957826_76958790_76958884_77091912_77092066_77120845
ENSMUSG00000063065.14_126358823_126364593_1	chr7	+	1352	9	FSM	ENSMUSG00000063065.14	ENSMUST00000057669.16	1800	9	50	398	0	-398	multi-exon	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATGAGGTGGCCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	126358822	126364593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126358991_126359902_126360086_126362206_126362397_126362569_126362687_126362912_126363028_126363405_126363538_126363705_126363816_126363894_126364050_126364411
ENSMUSG00000063065.14_126358832_126364653_1	chr7	+	1403	9	FSM	ENSMUSG00000063065.14	ENSMUST00000057669.16	1800	9	59	338	9	-338	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCTCTGGTAGACCGTT	NA	NA	NA	NA	NA	NA	NA	NA	126358831	126364653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126358991_126359902_126360086_126362206_126362397_126362569_126362687_126362912_126363028_126363405_126363538_126363705_126363816_126363894_126364050_126364411
ENSMUSG00000063065.14_126358940_126364698_1	chr7	+	1340	9	FSM	ENSMUSG00000063065.14	ENSMUST00000057669.16	1800	9	167	293	57	-293	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGACCTGTGCTACGGAG	NA	NA	NA	NA	NA	NA	NA	NA	126358939	126364698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126358991_126359902_126360086_126362206_126362397_126362569_126362687_126362912_126363028_126363405_126363538_126363705_126363816_126363894_126364050_126364411
ENSMUSG00000063065.14_126359921_126364016_1	chr7	+	834	6	ISM	ENSMUSG00000063065.14	ENST00000395200.5	960	7	1038	0	152	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAACAGACACCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	126359920	126364016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126360086_126362206_126362397_126362912_126363028_126363405_126363538_126363705_126363816_126363894
ENSMUSG00000063065.14_126359921_126364991_1	chr7	+	1564	8	FSM	ENSMUSG00000063065.14	ENSMUST00000091328.4	1716	8	152	0	152	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCTGTCTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	126359920	126364991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126360086_126362206_126362397_126362569_126362687_126362912_126363028_126363405_126363538_126363705_126363816_126363894_126364050_126364411
ENSMUSG00000063142.16_23349959_23359269_1	chr14	-	314	2	ISM	ENSMUSG00000063142.16	ENST00000457953.6	3476	28	494102	14	202334	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCAGGAGACCAGAACTA	NA	NA	NA	NA	NA	NA	NA	NA	23359269	23349958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23350111_23359107
ENSMUSG00000063142.16_23349959_23417731_1	chr14	-	1383	9	ISM	ENSMUSG00000063142.16	ENST00000404771.8	3505	29	435640	14	143872	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCAGGAGACCAGAACTA	NA	NA	NA	NA	NA	NA	NA	NA	23417731	23349958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23350111_23356792_23356822_23359107_23359333_23361716_23361836_23364190_23364386_23380907_23381039_23387012_23387127_23413868_23414062_23417506
ENSMUSG00000063142.16_23358056_23380943_1	chr14	-	1627	4	ISM	ENSMUSG00000063142.16	ENSMUST00000112423.10	3664	28	319314	8593	180660	-994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1711	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGGGCCCCGATGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	23380943	23358055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23359333_23361716_23361836_23364190_23364386_23380907
ENSMUSG00000063142.16_23358363_23413969_1	chr14	-	1630	6	ISM	ENSMUSG00000063142.16	ENSMUST00000112423.10	3664	28	286288	8900	147634	720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATCAAATCTTAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	23413969	23358362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23359333_23361716_23361836_23364190_23364386_23380907_23381039_23387012_23387127_23413868
ENSMUSG00000063142.16_23358420_23414025_1	chr14	-	1629	6	ISM	ENSMUSG00000063142.16	ENSMUST00000112423.10	3664	28	286232	8957	147578	663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAGTGAATGTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	23414025	23358419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23359333_23361716_23361836_23364190_23364386_23380907_23381039_23387012_23387127_23413868
ENSMUSG00000063142.16_23358534_23417615_1	chr14	-	1660	7	ISM	ENSMUSG00000063142.16	ENSMUST00000112423.10	3664	28	282642	9071	143988	549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGTGCGCAAAAGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	23417615	23358533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23359333_23361716_23361836_23364190_23364386_23380907_23381039_23387012_23387127_23413868_23414062_23417506
ENSMUSG00000063142.16_23358585_23417684_1	chr14	-	1678	7	ISM	ENSMUSG00000063142.16	ENSMUST00000112423.10	3664	28	282573	9122	143919	498	internal_fragment	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGTTTCCACTCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	23417684	23358584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23359333_23361716_23361836_23364190_23364386_23380907_23381039_23387012_23387127_23413868_23414062_23417506
ENSMUSG00000063142.16_23358661_23417712_1	chr14	-	1630	7	ISM	ENSMUSG00000063142.16	ENSMUST00000112423.10	3664	28	282545	9198	143891	422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTTTTATACACAAACA	NA	NA	NA	NA	NA	NA	NA	NA	23417712	23358660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23359333_23361716_23361836_23364190_23364386_23380907_23381039_23387012_23387127_23413868_23414062_23417506
ENSMUSG00000063142.16_23359083_23501735_1	chr14	-	1672	12	ISM	ENSMUSG00000063142.16	ENST00000354353.9	5557	26	351636	2402	59868	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTAGCCACCGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	23501735	23359082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23359333_23361716_23361836_23364190_23364386_23380907_23381039_23387012_23387127_23413868_23414062_23417506_23417732_23423205_23423330_23436327_23436416_23486017_23486095_23492060_23492148_23501666
ENSMUSG00000063142.16_23359199_23513258_1	chr14	-	1646	13	ISM	ENSMUSG00000063142.16	ENST00000354353.9	5557	26	340113	2518	48345	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTAAGAAGAGCTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	23513258	23359198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23359333_23361716_23361836_23364190_23364386_23380907_23381039_23387012_23387127_23413868_23414062_23417506_23417732_23423205_23423330_23436327_23436416_23486017_23486095_23492060_23492148_23501666_23501736_23513168
ENSMUSG00000063142.16_23364190_23513278_1	chr14	-	1420	11	ISM	ENSMUSG00000063142.16	ENSMUST00000163322.3	3162	26	340094	5107	48325	-5107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTCTACAGCTCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	23513278	23364189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23364386_23380907_23381039_23387012_23387127_23413868_23414062_23417506_23417732_23423205_23423330_23436327_23436422_23486017_23486095_23492060_23492148_23501666_23501736_23513168
ENSMUSG00000063142.16_23380965_23559922_1	chr14	-	1641	15	ISM	ENSMUSG00000063142.16	ENST00000354353.9	5557	26	293449	24284	1681	-21882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGCTTGTGGGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	23559922	23380964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23381039_23387012_23387127_23413868_23414062_23417506_23417732_23423205_23423330_23436327_23436416_23486017_23486095_23492060_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857
ENSMUSG00000063142.16_23387013_23555324_1	chr14	-	1402	12	ISM	ENSMUSG00000063142.16	ENSMUST00000163322.3	3162	26	298048	27930	6279	-27930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGGGTCACTGTAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	23555324	23387012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23387127_23413868_23414062_23417506_23417732_23423205_23423330_23436327_23436422_23486017_23486095_23492060_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241
ENSMUSG00000063142.16_23413881_23578466_1	chr14	-	1628	15	ISM	ENSMUSG00000063142.16	ENST00000354353.9	5557	26	274905	57200	-16863	-54798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTCCCAAGGTAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	23578466	23413880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23414062_23417506_23417732_23423205_23423330_23436327_23436416_23486017_23486095_23492060_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576792_23576885_23578417
ENSMUSG00000063142.16_23413938_23578510_1	chr14	-	1615	15	ISM	ENSMUSG00000063142.16	ENST00000354353.9	5557	26	274861	57257	-16907	-54855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCGTCACTCAACATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	23578510	23413937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23414062_23417506_23417732_23423205_23423330_23436327_23436416_23486017_23486095_23492060_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576792_23576885_23578417
ENSMUSG00000063142.16_23417506_23486094_1	chr14	-	530	4	ISM	ENSMUSG00000063142.16	ENST00000640141.1	5205	26	367277	60458	75509	-58423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCAAGTCGCACTATTT	NA	NA	NA	NA	NA	NA	NA	NA	23486094	23417505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23417732_23423205_23423330_23436327_23436422_23486008
ENSMUSG00000063142.16_23417632_23578486_1	chr14	-	1348	14	ISM	ENSMUSG00000063142.16	ENSMUST00000163322.3	3162	26	274886	58549	-16883	-58549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCGTGCTAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	23578486	23417631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23417732_23423205_23423330_23436327_23436422_23486017_23486095_23492060_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576603_23576696_23578417
ENSMUSG00000063142.16_23417657_23640779_1	chr14	-	1642	17	ISM	ENSMUSG00000063142.16	ENST00000354353.9	5557	26	212592	60976	59478	-58574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTGGCCTCCGGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	23640779	23417656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23417732_23423205_23423330_23436327_23436416_23486017_23486095_23492060_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576792_23576885_23578417_23578589_23580286_23580363_23593098_23593175_23640708
ENSMUSG00000063142.16_23423206_23641749_1	chr14	-	1702	17	ISM	ENSMUSG00000063142.16	ENST00000354353.9	5557	26	211622	66525	58508	-64123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAGGAACCATGATG	NA	NA	NA	NA	NA	NA	NA	NA	23641749	23423205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23423330_23436327_23436416_23486017_23486095_23492060_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576792_23576885_23578417_23578589_23580286_23580363_23593098_23593175_23640708_23640821_23641655
ENSMUSG00000063142.16_23492061_23641749_1	chr14	-	1413	14	ISM	ENSMUSG00000063142.16	ENSMUST00000163322.3	3162	26	211623	132978	58508	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGTTTATTTTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	23641749	23492060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576603_23576696_23578417_23578589_23580286_23580363_23593098_23593175_23640708_23640821_23641655
ENSMUSG00000063142.16_23501670_23560138_1	chr14	-	872	7	ISM	ENSMUSG00000063142.16	ENSMUST00000112423.10	3664	28	140119	152207	1465	-9609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTAAGTTGCTGTTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	23560138	23501669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857
ENSMUSG00000063142.16_23513208_23853372_1	chr14	-	1445	14	ISM	ENSMUSG00000063142.16	ENSMUST00000163322.3	3162	26	0	154125	0	-21147	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGCCTTCGTGGGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	23853372	23513207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576603_23576696_23578417_23578589_23580286_23580363_23593098_23593175_23640708_23640821_23641655_23641750_23700192_23700255_23853207
ENSMUSG00000063142.16_23536011_23576811_1	chr14	-	727	7	ISM	ENSMUSG00000063142.16	ENST00000639120.1	1615	14	276560	60	-15208	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATCTGCCAGGATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	23576811	23536010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23536193_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576792
ENSMUSG00000063142.16_23536134_23578474_1	chr14	-	734	8	ISM	ENSMUSG00000063142.16	ENST00000639120.1	1615	14	274897	183	-16871	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGGGCAGAAAGATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	23578474	23536133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23536193_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576792_23576885_23578417
ENSMUSG00000063142.16_23544607_23578588_1	chr14	-	789	7	ISM	ENSMUSG00000063142.16	ENST00000639120.1	1615	14	274783	8656	-16985	-8656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACGTCTTGTCTTATTAG	NA	NA	NA	NA	NA	NA	NA	NA	23578588	23544606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576792_23576885_23578417
ENSMUSG00000063142.16_23551193_23593174_1	chr14	-	785	8	ISM	ENSMUSG00000063142.16	ENST00000639120.1	1615	14	260197	15242	-31571	-15242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGCTGAGACTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	23593174	23551192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576792_23576885_23578417_23578589_23580286_23580363_23593098
ENSMUSG00000063142.16_23558108_23560655_1	chr14	-	901	2	ISM	ENSMUSG00000063142.16	ENST00000640632.1	2423	8	948	66047	948	-22157	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGTAAGGAGAAACAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	23560655	23558107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_23558211_23559857
ENSMUSG00000063145.11_69477607_69497662_1	chr2	+	1160	12	FSM	ENSMUSG00000063145.11	ENSMUST00000074963.9	1468	12	55	253	47	-253	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGGCTTGGGATATTT	NA	NA	NA	NA	NA	NA	NA	NA	69477606	69497662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_69477687_69479365_69479449_69483125_69483192_69484406_69484457_69484589_69484718_69485842_69485979_69487240_69487337_69491379_69491443_69493369_69493505_69495369_69495454_69497284_69497309_69497447
ENSMUSG00000063145.11_69484590_69497915_1	chr2	+	1134	8	ISM	ENSMUSG00000063145.11	ENSMUST00000074963.9	1468	12	7038	0	7030	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTTTTGAAAGTATTA	NA	NA	NA	NA	NA	NA	NA	NA	69484589	69497915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_69484718_69485842_69485979_69487240_69487337_69491379_69491443_69493369_69493505_69495369_69495454_69497284_69497309_69497447
ENSMUSG00000063160.13_26958341_26973551_1	chr7	+	649	6	ISM	ENSMUSG00000063160.13	ENST00000598779.5	2152	9	45	7638	45	-7638	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGGGACAAGAAGAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	26958340	26973551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_26958387_26964300_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379
ENSMUSG00000063160.13_26964311_26976101_1	chr7	+	661	6	ISM	ENSMUSG00000063160.13	ENST00000598779.5	2152	9	6015	5088	6015	-5088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTTCTCCGACACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	26964310	26976101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051
ENSMUSG00000063160.13_26964360_26976155_1	chr7	+	666	6	ISM	ENSMUSG00000063160.13	ENST00000598779.5	2152	9	6064	5034	6064	-5034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAGTGGCTGCAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	26964359	26976155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051
ENSMUSG00000063160.13_26964414_26976209_1	chr7	+	666	6	ISM	ENSMUSG00000063160.13	ENST00000598779.5	2152	9	6118	4980	6118	-4980	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGCAGCTGGTTCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	26964413	26976209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051
ENSMUSG00000063160.13_26968260_26978993_1	chr7	+	646	4	ISM	ENSMUSG00000063160.13	ENST00000598779.5	2152	9	9964	2196	9964	-2196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCGTCTTTCGCCAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	26968259	26978993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_26968345_26973379_26973570_26976051_26976358_26978928
ENSMUSG00000063160.13_26968316_26979051_1	chr7	+	648	4	ISM	ENSMUSG00000063160.13	ENST00000598779.5	2152	9	10020	2138	10020	-2138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCCCTTCCACTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	26968315	26979051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_26968345_26973379_26973570_26976051_26976358_26978928
ENSMUSG00000063160.13_26973405_26980254_1	chr7	+	670	4	ISM	ENSMUSG00000063160.13	ENST00000598779.5	2152	9	15109	935	15109	-935	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGAGCGATGGTTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	26973404	26980254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_26973570_26976051_26976358_26978928_26979052_26980178
ENSMUSG00000063160.13_26973440_26980323_1	chr7	+	704	4	ISM	ENSMUSG00000063160.13	ENST00000598779.5	2152	9	15144	866	15144	-866	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACAACAGCAGCAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	26973439	26980323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_26973570_26976051_26976358_26978928_26979052_26980178
ENSMUSG00000063160.13_26973503_26980369_1	chr7	+	687	4	ISM	ENSMUSG00000063160.13	ENST00000598779.5	2152	9	15207	820	15207	-820	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCCCCACCCTTCAACC	NA	NA	NA	NA	NA	NA	NA	NA	26973502	26980369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_26973570_26976051_26976358_26978928_26979052_26980178
ENSMUSG00000063160.13_26976194_26980525_1	chr7	+	634	3	ISM	ENSMUSG00000063160.13	ENST00000598779.5	2152	9	17898	664	17898	-664	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGCATCACACCTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	26976193	26980525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_26976358_26978928_26979052_26980178
ENSMUSG00000063160.13_26976240_26980604_1	chr7	+	667	3	ISM	ENSMUSG00000063160.13	ENST00000598779.5	2152	9	17944	585	17944	-585	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAAAAGCTGGGGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	26976239	26980604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_26976358_26978928_26979052_26980178
ENSMUSG00000063160.13_26978965_26980735_1	chr7	+	644	2	ISM	ENSMUSG00000063160.13	ENST00000598779.5	2152	9	20669	454	20669	-454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCAGTGGGCGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	26978964	26980735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_26979052_26980178
ENSMUSG00000063160.13_26979014_26980788_1	chr7	+	648	2	ISM	ENSMUSG00000063160.13	ENST00000598779.5	2152	9	20718	401	20718	-401	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTCTCTGGTGACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	26979013	26980788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_26979052_26980178
ENSMUSG00000063172.14_107111122_107137129_1	chr4	+	606	6	NNC	ENSMUSG00000063172.14	novel	608	6	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTCCATTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	107111121	107137129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_107111193_107119663_107119777_107130809_107130917_107132419_107132489_107135129_107135168_107136921
ENSMUSG00000063200.5_43552111_43556022_2	chr13	+	1240	8	FSM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	245	315	243	-315	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTCCTTGCACAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	43552110	43556022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ENSMUSG00000063200.5_43552111_43556200_1	chr13	+	1494	7	NIC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	243	-137	intron_retention	FALSE	canonical	NA	NA	NA	NA	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATATCGCTACATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	43552110	43556200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr13_+_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ENSMUSG00000063200.5_43552111_43556200_2	chr13	+	1494	6	NNC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	243	-137	intron_retention	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATATCGCTACATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	43552110	43556200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_43552272_43552986_43553075_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ENSMUSG00000063200.5_43554069_43556337_1	chr13	+	1411	5	ISM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	2203	0	2201	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGACATGTAATACTGT	NA	NA	NA	NA	NA	NA	NA	NA	43554068	43556337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ENSMUSG00000063229.16_46495265_46505051_1	chr7	+	1578	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	38244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	46495264	46505051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501411_46503406_46503531_46504400
ENSMUSG00000063235.19_90741217_90744483_1	chr2	-	603	2	ISM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	3906	160	3906	-160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAGGGAAAGAAGTATC	NA	NA	NA	NA	NA	NA	NA	NA	90744483	90741216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_90741664_90744327
ENSMUSG00000063235.19_90741338_90748023_1	chr2	-	669	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	366	281	366	-281	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAAGATTGTCTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	90748023	90741337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
ENSMUSG00000063235.19_90741448_90748109_1	chr2	-	645	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	280	391	280	-391	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTTTACAGGACAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	90748109	90741447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
ENSMUSG00000063235.19_90741533_90748141_1	chr2	-	592	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	248	476	248	-476	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTACTGATTATCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	90748141	90741532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
ENSMUSG00000063235.19_90744382_90748259_1	chr2	-	525	3	ISM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	130	3325	130	-3325	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGGCTGGTCGATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	90748259	90744381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_90744520_90747772_90747854_90747953
ENSMUSG00000063235.19_90744382_90748389_1	chr2	-	655	3	ISM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	0	3325	0	-3325	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGGCTGGTCGATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	90748389	90744381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_90744520_90747772_90747854_90747953
ENSMUSG00000063236.7_76832729_76834932_1	chr15	+	1107	4	NNC	ENSMUSG00000063236.7	novel	1111	4	NA	NA	7	3	intron_retention	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATGGTGTGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	76832728	76834932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_76833129_76833276_76833353_76833743_76833891_76834448
ENSMUSG00000063236.7_76832949_76834932_2	chr15	+	887	4	FSM	ENSMUSG00000063236.7	ENSMUST00000230274.2	1111	4	227	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATGGTGTGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	76832948	76834932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76833120_76833267_76833353_76833743_76833891_76834448
ENSMUSG00000063239.18_27653909_27657298_1	chr17	-	563	2	ISM	ENSMUSG00000063239.18	ENST00000544773.6	2491	10	38520	8317	38520	-8317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCAGGGCAAGCGGTC	NA	NA	NA	NA	NA	NA	NA	NA	27657298	27653908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27654443_27657269
ENSMUSG00000063239.18_27654070_27657672_1	chr17	-	547	3	ISM	ENSMUSG00000063239.18	ENST00000544773.6	2491	10	38146	8478	38146	-8478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCCTGCTGGCGGGCATC	NA	NA	NA	NA	NA	NA	NA	NA	27657672	27654069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27654443_27657269_27657407_27657635
ENSMUSG00000063239.18_27654129_27657723_1	chr17	-	539	3	ISM	ENSMUSG00000063239.18	ENST00000544773.6	2491	10	38095	8537	38095	-8537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGTGCGCTACAACG	NA	NA	NA	NA	NA	NA	NA	NA	27657723	27654128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27654443_27657269_27657407_27657635
ENSMUSG00000063239.18_27654287_27669152_1	chr17	-	548	4	ISM	ENSMUSG00000063239.18	ENST00000544773.6	2491	10	26666	8695	26666	-8695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCTGTAAGACCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	27669152	27654286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27654443_27657269_27657407_27657635_27657837_27669098
ENSMUSG00000063239.18_27654413_27670914_1	chr17	-	545	5	ISM	ENSMUSG00000063239.18	ENST00000544773.6	2491	10	24904	8821	24904	-8821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTGCCACGCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	27670914	27654412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27654443_27657269_27657407_27657635_27657837_27669098_27669240_27670878
ENSMUSG00000063239.18_27657799_27691937_1	chr17	-	526	5	ISM	ENSMUSG00000063239.18	ENST00000544773.6	2491	10	3881	12207	3881	-12207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGAAGGTGCAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	27691937	27657798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27657837_27669098_27669240_27670878_27671034_27673460_27673597_27691881
ENSMUSG00000063239.18_27669130_27692041_1	chr17	-	561	4	ISM	ENSMUSG00000063239.18	ENST00000544773.6	2491	10	3777	23538	3777	-23538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGGGAAGCCACATCAA	NA	NA	NA	NA	NA	NA	NA	NA	27692041	27669129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27669240_27670878_27671034_27673460_27673597_27691881
ENSMUSG00000063239.18_27670897_27695793_1	chr17	-	570	4	ISM	ENSMUSG00000063239.18	ENST00000544773.6	2491	10	25	25305	25	-25305	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGACGTCTGTGCGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	27695793	27670896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27671034_27673460_27673597_27691881_27692099_27695713
ENSMUSG00000063253.12_84161124_84164263_1	chr8	-	1628	2	ISM	ENSMUSG00000063253.12	ENSMUST00000212905.2	798	4	612	-975	389	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTGTGTGTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	84164263	84161123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84162670_84164181
ENSMUSG00000063253.12_84161338_84164687_1	chr8	-	1406	2	FSM	ENSMUSG00000063253.12	ENST00000506597.2	1575	2	-35	204	-35	-193	multi-exon	FALSE	canonical	NA	NA	NA	NA	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACTAATGCAGCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	84164687	84161337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_84162670_84164613
ENSMUSG00000063253.12_84161338_84184978_1	chr8	-	1577	4	FSM	ENSMUSG00000063253.12	ENSMUST00000081506.11	1791	4	0	214	0	-193	multi-exon	FALSE	canonical	NA	NA	NA	NA	1648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACTAATGCAGCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	84184978	84161337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_84162670_84164181_84164266_84164613_84164686_84184889
ENSMUSG00000063253.12_84162348_84169079_1	chr8	-	507	4	FSM	ENSMUSG00000063253.12	ENSMUST00000212031.2	409	4	55	-153	0	153	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTCTATGAAAATGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	84169079	84162347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_84162670_84164181_84164266_84164613_84164686_84169050
ENSMUSG00000063275.16_14031642_14060831_1	chr2	-	985	6	NNC	ENSMUSG00000063275.16	novel	993	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGCATTGTTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	14060831	14031641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_14031818_14040589_14040769_14045644_14045761_14049593_14049683_14049931_14050067_14060541
ENSMUSG00000063275.16_14031642_14060831_3	chr2	-	991	6	FSM	ENSMUSG00000063275.16	ENST00000361271.8	1075	6	-13	97	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGCATTGTTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	14060831	14031641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_14031818_14040589_14040769_14045644_14045767_14049593_14049683_14049931_14050067_14060541
ENSMUSG00000063275.16_14031642_14060831_4	chr2	-	974	6	NIC	ENSMUSG00000063275.16	novel	993	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGCATTGTTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	14060831	14031641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_14031818_14040589_14040769_14045644_14045767_14049593_14049683_14049948_14050067_14060541
ENSMUSG00000063275.16_14040661_14049644_1	chr2	-	159	2	ISM	ENSMUSG00000063275.16	ENSMUST00000091429.12	871	6	11187	9019	11174	-8948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAACAAGTACAATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	14049644	14040660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_14040769_14049593
ENSMUSG00000063281.10_24122689_24137144_1	chr18	+	1751	3	FSM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	0	1289	0	-1289	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTACACAGTGCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	24122688	24137144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_24122789_24123234_24123448_24135706
ENSMUSG00000063281.10_24123236_24137260_1	chr18	+	1766	2	ISM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	547	1173	547	-1173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGCCTTTACCCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	24123235	24137260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24123448_24135706
ENSMUSG00000063281.10_24123291_24137326_1	chr18	+	1777	2	ISM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	602	1107	602	-1107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAAGCTTCAGTCAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	24123290	24137326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_24123448_24135706
ENSMUSG00000063296.6_94535992_94992925_1	chr15	+	1430	6	FSM	ENSMUSG00000063296.6	ENST00000551577.5	2509	6	30	1049	30	-1049	multi-exon	TRUE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACTTTAAAACCGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	94535991	94992925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_94536245_94612742_94612876_94777261_94777362_94829676_94829775_94909196_94909357_94992239
ENSMUSG00000063296.6_94536147_94992925_1	chr15	+	1275	6	FSM	ENSMUSG00000063296.6	ENST00000551577.5	2509	6	185	1049	185	-1049	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACTTTAAAACCGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	94536146	94992925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_94536245_94612742_94612876_94777261_94777362_94829676_94829775_94909196_94909357_94992239
ENSMUSG00000063296.6_94612735_94993096_1	chr15	+	1356	5	ISM	ENSMUSG00000063296.6	ENST00000551577.5	2509	6	76773	878	76773	-878	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTGCTTTTCCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	94612734	94993096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_94612876_94777261_94777362_94829676_94829775_94909196_94909357_94992239
ENSMUSG00000063296.6_94612785_94993148_1	chr15	+	1358	5	ISM	ENSMUSG00000063296.6	ENST00000551577.5	2509	6	76823	826	76823	-826	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTAGCCGATTACCCATG	NA	NA	NA	NA	NA	NA	NA	NA	94612784	94993148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_94612876_94777261_94777362_94829676_94829775_94909196_94909357_94992239
ENSMUSG00000063296.6_94612829_94993207_1	chr15	+	1373	5	ISM	ENSMUSG00000063296.6	ENST00000551577.5	2509	6	76867	767	76867	-767	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTTTTTTAACTGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	94612828	94993207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_94612876_94777261_94777362_94829676_94829775_94909196_94909357_94992239
ENSMUSG00000063296.6_94777326_94993331_1	chr15	+	1386	4	ISM	ENSMUSG00000063296.6	ENST00000551577.5	2509	6	241364	643	241364	-643	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATTTGTGGTTGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	94777325	94993331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_94777362_94829676_94829775_94909196_94909357_94992239
ENSMUSG00000063316.14_101333124_101336355_1	chr11	+	607	5	NNC	ENSMUSG00000063316.14	novel	614	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	101333123	101336355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_101333283_101333548_101333632_101334326_101334497_101336045_101336157_101336271
ENSMUSG00000063316.14_101333124_101336355_2	chr11	+	608	5	NNC	ENSMUSG00000063316.14	novel	614	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	101333123	101336355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_101333283_101333548_101333626_101334326_101334497_101336045_101336157_101336264
ENSMUSG00000063334.17_111808680_111821153_1	chr10	+	1728	10	FSM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	111	3184	-18	567	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGATATCAGACACTGG	NA	NA	NA	NA	NA	NA	NA	NA	111808679	111821153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
ENSMUSG00000063334.17_111813218_111821700_1	chr10	+	1743	6	ISM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	4649	2637	4520	1114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGTTAACTGTAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	111813217	111821700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
ENSMUSG00000063334.17_111815823_111821842_1	chr10	+	1711	4	ISM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	7254	2495	7125	1256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATATTTTTCAGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	111815822	111821842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_111815963_111818705_111818784_111818868_111818963_111820443
ENSMUSG00000063354.8_76496735_76498318_1	chr15	-	935	6	ISM	ENSMUSG00000063354.8	ENST00000276833.9	1215	7	537	0	537	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCTATCCCATCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	76498318	76496734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76498146_76498256
ENSMUSG00000063354.8_76496793_76498506_1	chr15	-	1065	6	ISM	ENSMUSG00000063354.8	ENST00000276833.9	1215	7	349	58	349	-58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGGCTGGACCGTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	76498506	76496792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76498146_76498256
ENSMUSG00000063354.8_76496793_76498731_1	chr15	-	1033	7	FSM	ENSMUSG00000063354.8	ENST00000276833.9	1215	7	124	58	124	-58	multi-exon	FALSE	canonical	NA	NA	NA	NA	3112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGGCTGGACCGTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	76498731	76496792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76498146_76498256_76498430_76498686
ENSMUSG00000063354.8_76497012_76498782_1	chr15	-	956	6	ISM	ENSMUSG00000063354.8	ENST00000276833.9	1215	7	73	277	73	-277	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGATTCTGGCGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	76498782	76497011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76497143_76497403_76497557_76497656_76497712_76497797_76498146_76498256_76498430_76498686
ENSMUSG00000063354.8_76497840_76499021_1	chr15	-	723	4	ISM	ENSMUSG00000063354.8	ENST00000301305.8	1974	11	1862	1105	-166	-1105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGACAGTCCAAACAGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	76499021	76497839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76498146_76498256_76498430_76498686_76498859_76498949
ENSMUSG00000063354.8_76497911_76499053_1	chr15	-	684	4	ISM	ENSMUSG00000063354.8	ENST00000301305.8	1974	11	1830	1176	-198	-1176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGATGGGCCTTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	76499053	76497910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76498146_76498256_76498430_76498686_76498859_76498949
ENSMUSG00000063354.8_76498017_76499285_1	chr15	-	680	5	ISM	ENSMUSG00000063354.8	ENST00000301305.8	1974	11	1598	1282	-430	-1282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCAACCTCTTGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	76499285	76498016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243
ENSMUSG00000063354.8_76498017_76499327_1	chr15	-	722	5	ISM	ENSMUSG00000063354.8	ENST00000301305.8	1974	11	1556	1282	-472	-1282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCAACCTCTTGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	76499327	76498016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243
ENSMUSG00000063354.8_76498017_76499380_1	chr15	-	775	5	ISM	ENSMUSG00000063354.8	ENST00000301305.8	1974	11	1503	1282	-525	-1282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCAACCTCTTGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	76499380	76498016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243
ENSMUSG00000063354.8_76498310_76500105_1	chr15	-	683	5	ISM	ENSMUSG00000063354.8	ENST00000301305.8	1974	11	778	1575	778	-1575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCTGTGGGCGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	76500105	76498309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074
ENSMUSG00000063354.8_76498414_76500220_1	chr15	-	694	5	ISM	ENSMUSG00000063354.8	ENST00000301305.8	1974	11	663	1679	663	-1679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCCACCCTGCTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	76500220	76498413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074
ENSMUSG00000063354.8_76498740_76500321_1	chr15	-	726	4	ISM	ENSMUSG00000063354.8	ENST00000301305.8	1974	11	562	2005	562	-2005	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGCCCCTACCCCACTA	NA	NA	NA	NA	NA	NA	NA	NA	76500321	76498739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76498859_76498949_76499114_76499243_76499440_76500074
ENSMUSG00000063354.8_76498982_76500838_1	chr15	-	679	4	ISM	ENSMUSG00000063354.8	ENST00000301305.8	1974	11	45	2247	45	-2247	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACAACAGCAACTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	76500838	76498981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76499114_76499243_76499440_76500074_76500360_76500772
ENSMUSG00000063358.18_16801246_16856298_1	chr16	+	1326	8	FSM	ENSMUSG00000063358.18	ENSMUST00000115731.10	1747	8	-185	606	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGGTATCTAGAACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	16801245	16856298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177
ENSMUSG00000063358.18_16801431_16861727_1	chr16	+	1324	9	FSM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	185	3590	0	-886	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCAGCAGGCCGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	16801430	16861727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ENSMUSG00000063358.18_16801551_16853322_1	chr16	+	675	6	ISM	ENSMUSG00000063358.18	ENST00000544786.1	945	7	60	2972	60	-2972	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTGACATTTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	16801550	16853322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16853305
ENSMUSG00000063358.18_16833761_16861873_1	chr16	+	1298	8	ISM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	32515	3444	32270	-740	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATCAGAGGGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	16833760	16861873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ENSMUSG00000063358.18_16833822_16856195_1	chr16	+	673	6	ISM	ENSMUSG00000063358.18	ENST00000544786.1	945	7	32331	99	32331	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGTTTGACATGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	16833821	16856195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16853305_16853416_16856177
ENSMUSG00000063358.18_16833869_16856253_1	chr16	+	684	6	ISM	ENSMUSG00000063358.18	ENST00000544786.1	945	7	32378	41	32378	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGAGACTGCTAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	16833868	16856253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16853305_16853416_16856177
ENSMUSG00000063358.18_16836150_16862000_1	chr16	+	1241	7	ISM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	34904	3317	34659	-613	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTAACTGTCTACCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	16836149	16862000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ENSMUSG00000063358.18_16841314_16862145_1	chr16	+	1198	6	ISM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	40068	3172	39823	-468	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCCCAGCTTTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	16841313	16862145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ENSMUSG00000063358.18_16841343_16862222_1	chr16	+	1246	6	ISM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	40097	3095	39852	-391	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCAGATTTTATATGGT	NA	NA	NA	NA	NA	NA	NA	NA	16841342	16862222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ENSMUSG00000063358.18_16841417_16862268_1	chr16	+	1218	6	ISM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	40171	3049	39926	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGCCAAAATGTTACATG	NA	NA	NA	NA	NA	NA	NA	NA	16841416	16862268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ENSMUSG00000063358.18_16844230_16862474_1	chr16	+	1285	4	ISM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	42984	2843	42739	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATTTAGCTAAAAGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	16844229	16862474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16844354_16853305_16853416_16856177_16856304_16861549
ENSMUSG00000063358.18_16844333_16862613_1	chr16	+	1321	4	ISM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	43087	2704	42842	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGCTCTGTTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	16844332	16862613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16844354_16853305_16853416_16856177_16856304_16861549
ENSMUSG00000063358.18_16856270_16862749_1	chr16	+	1234	2	ISM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	55024	2568	54779	136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGGTGTTATCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	16856269	16862749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16856304_16861549
ENSMUSG00000063383.6_22363456_22382281_1	chr17	-	2349	4	ISM	ENSMUSG00000063383.6	ENSMUST00000080249.6	2872	5	2890	116	2890	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTTTTAAGTTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	22382281	22363455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_22365516_22366369_22366497_22369015_22369064_22382167
ENSMUSG00000063383.6_22363627_22384905_1	chr17	-	2319	5	FSM	ENSMUSG00000063383.6	ENSMUST00000080249.6	2872	5	266	287	266	-287	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTGACAGCATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	22384905	22363626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_22365516_22366369_22366497_22369015_22369064_22382167_22382317_22384799
ENSMUSG00000063406.12_108269493_108280419_1	chr5	-	3726	4	NNC	ENSMUSG00000063406.12	novel	3800	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAATTGTTACCTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	108280419	108269492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_108272626_108273766_108273951_108277883_108277975_108280101
ENSMUSG00000063406.12_108269493_108280486_1	chr5	-	3795	4	NNC	ENSMUSG00000063406.12	novel	3800	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAATTGTTACCTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	108280486	108269492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_108272626_108273766_108273946_108277883_108277982_108280101
ENSMUSG00000063409.13_123630292_123637729_1	chr5	+	742	4	ISM	ENSMUSG00000063409.13	ENST00000339777.5	1320	7	10	3650	10	-3650	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTACAGGTGATAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	123630291	123637729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_123630544_123632263_123632375_123634941_123635082_123637490
ENSMUSG00000063409.13_123630506_123639186_1	chr5	+	748	6	ISM	ENSMUSG00000063409.13	ENST00000339777.5	1320	7	224	2193	224	-2193	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATGTCCAAGGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	123630505	123639186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_123630544_123632263_123632375_123634941_123635082_123637490_123637730_123638288_123638457_123639134
ENSMUSG00000063409.13_123632357_123639309_1	chr5	+	740	5	ISM	ENSMUSG00000063409.13	ENST00000339777.5	1320	7	2075	2070	2075	-2070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGCCACAGTCAATCG	NA	NA	NA	NA	NA	NA	NA	NA	123632356	123639309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_123632375_123634941_123635082_123637490_123637730_123638288_123638457_123639134
ENSMUSG00000063409.13_123635042_123641291_1	chr5	+	759	5	ISM	ENSMUSG00000063409.13	ENST00000339777.5	1320	7	4760	88	4760	-88	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATGAGATGAAGCACACC	NA	NA	NA	NA	NA	NA	NA	NA	123635041	123641291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_123635082_123637490_123637730_123638288_123638457_123639134_123639394_123641238
ENSMUSG00000063410.9_121529398_121534734_1	chr14	-	649	5	NNC	ENSMUSG00000063410.9	novel	1240	10	NA	NA	81611	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGTAACCGGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	121534734	121529397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_121529520_121530832_121530902_121531601_121531726_121532066_121532213_121534546
ENSMUSG00000063410.9_121529467_121539640_1	chr14	-	623	6	ISM	ENSMUSG00000063410.9	ENST00000455035.1	1240	10	76705	69	76705	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTACTTGGCGGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	121539640	121529466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_121529522_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597
ENSMUSG00000063410.9_121530833_121539755_1	chr14	-	683	5	ISM	ENSMUSG00000063410.9	ENST00000455035.1	1240	10	76590	1435	76590	-1435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGATCCCTGGCTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	121539755	121530832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597
ENSMUSG00000063410.9_121531602_121575064_1	chr14	-	1011	7	ISM	ENSMUSG00000063410.9	ENST00000455035.1	1240	10	41281	2204	41281	-2204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTGTGCCCACCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	121575064	121531601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833
ENSMUSG00000063410.9_121531664_121540216_1	chr14	-	610	5	ISM	ENSMUSG00000063410.9	ENST00000455035.1	1240	10	76129	2266	76129	-2266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGATCCCAAGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	121540216	121531663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158
ENSMUSG00000063410.9_121532067_121545483_1	chr14	-	656	5	ISM	ENSMUSG00000063410.9	ENST00000455035.1	1240	10	70862	2669	70862	-2669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTGCCCTGTCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	121545483	121532066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426
ENSMUSG00000063410.9_121534601_121575064_1	chr14	-	687	5	ISM	ENSMUSG00000063410.9	ENST00000455035.1	1240	10	41281	5203	41281	-5203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAACCCCTCAAGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	121575064	121534600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833
ENSMUSG00000063445.15_4527923_4536961_1	chr16	-	2422	5	NNC	ENSMUSG00000063445.15	novel	2440	5	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAAACTTTTGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	4536961	4527922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_4529468_4531503_4531695_4532280_4532525_4534160_4534400_4536758
ENSMUSG00000063457.15_80128608_80129948_1	chr10	+	464	3	NNC	ENSMUSG00000063457.15	novel	383	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80128607	80129948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80128689_80129475_80129711_80129800
ENSMUSG00000063457.15_80128608_80129948_2	chr10	+	470	3	FSM	ENSMUSG00000063457.15	ENSMUST00000062674.7	572	3	129	-27	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80128607	80129948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80128695_80129475_80129711_80129800
ENSMUSG00000063480.9_81926486_81928148_1	chr15	-	135	2	ISM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	3651	1760	3651	-1760	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTGTGCGAAGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	81928148	81926485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81926570_81928097
ENSMUSG00000063480.9_81926538_81928201_1	chr15	-	136	2	ISM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	3598	1812	3598	-1812	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGTGATGGCAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	81928201	81926537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81926570_81928097
ENSMUSG00000063480.9_81928186_81931799_1	chr15	-	145	2	ISM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	0	3460	0	-3460	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCAGATGCCCACCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	81931799	81928185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_81928219_81931687
ENSMUSG00000063506.15_32938780_33089400_1	chr14	+	2117	9	FSM	ENSMUSG00000063506.15	ENST00000435790.6	2173	9	56	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGGACCACTCTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	32938779	33089400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_32939069_32993740_32993941_33020660_33020749_33065185_33065315_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526
ENSMUSG00000063506.15_32938907_33088697_1	chr14	+	1287	9	FSM	ENSMUSG00000063506.15	ENST00000435790.6	2173	9	183	703	127	-703	multi-exon	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGACTTCATCTCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	32938906	33088697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_32939069_32993740_32993941_33020660_33020749_33065185_33065315_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526
ENSMUSG00000063506.15_33020658_33088589_1	chr14	+	868	7	FSM	ENSMUSG00000063506.15	ENST00000374172.5	1679	7	0	811	0	-811	multi-exon	TRUE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTCCCTTGAAGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	33020657	33088589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_33020749_33065185_33065363_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526
ENSMUSG00000063506.15_33065183_33088697_1	chr14	+	887	6	NNC	ENSMUSG00000063506.15	novel	1679	7	NA	NA	23523	-703	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGACTTCATCTCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	33065182	33088697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_33065363_33081074_33081283_33084399_33084533_33085232_33085307_33086350_33086472_33088526
ENSMUSG00000063506.15_33065269_33088697_1	chr14	+	802	6	ISM	ENSMUSG00000063506.15	ENST00000374172.5	1679	7	44611	703	23609	-703	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGACTTCATCTCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	33065268	33088697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33065363_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526
ENSMUSG00000063506.15_33081250_33091330_1	chr14	+	1260	6	ISM	ENSMUSG00000063506.15	ENSMUST00000111956.9	2596	11	142470	561	39590	-561	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGAAGCAGATGTCTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	33081249	33091330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526_33089401_33091306
ENSMUSG00000063506.15_33084441_33091406_1	chr14	+	1262	5	ISM	ENSMUSG00000063506.15	ENSMUST00000111956.9	2596	11	145661	485	42781	-485	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAACTCGGAGCGAGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	33084440	33091406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33084533_33085232_33085307_33086349_33086472_33088526_33089401_33091306
ENSMUSG00000063506.15_33084497_33091463_1	chr14	+	1263	5	ISM	ENSMUSG00000063506.15	ENSMUST00000111956.9	2596	11	145717	428	42837	-428	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGGAGGAGTTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	33084496	33091463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33084533_33085232_33085307_33086349_33086472_33088526_33089401_33091306
ENSMUSG00000063506.15_33085295_33091601_1	chr14	+	1303	4	ISM	ENSMUSG00000063506.15	ENSMUST00000111956.9	2596	11	146515	290	43635	-290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCCAGAAGCTTCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	33085294	33091601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33085307_33086349_33086472_33088526_33089401_33091306
ENSMUSG00000063506.15_33086390_33089274_1	chr14	+	830	2	ISM	ENSMUSG00000063506.15	ENSMUST00000111955.2	2148	6	44730	2617	44730	-126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAATGACCCAGGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	33086389	33089274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33086472_33088526
ENSMUSG00000063506.15_33088603_33091782_1	chr14	+	1274	2	ISM	ENSMUSG00000063506.15	ENSMUST00000111955.2	2148	6	46943	109	46943	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATGAGCATCCGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	33088602	33091782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33089401_33091306
ENSMUSG00000063506.15_33088718_33091891_1	chr14	+	1268	2	ISM	ENSMUSG00000063506.15	ENSMUST00000111955.2	2148	6	47058	0	47058	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGCCTGTCACCAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	33088717	33091891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_33089401_33091306
ENSMUSG00000063511.12_45026016_45026870_1	chr7	-	778	2	ISM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	18296	139	17367	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTAGTGGACATGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	45026870	45026015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45026703_45026779
ENSMUSG00000063511.12_45026016_45030242_1	chr7	-	850	3	ISM	ENSMUSG00000063511.12	ENST00000221448.9	1333	9	13995	0	13995	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTAGTGGACATGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	45030242	45026015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45026676_45026779_45026868_45030140
ENSMUSG00000063511.12_45026016_45033309_1	chr7	-	932	4	ISM	ENSMUSG00000063511.12	ENST00000221448.9	1333	9	10928	0	10928	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTAGTGGACATGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	45033309	45026015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45026676_45026779_45026868_45030140_45030243_45033227
ENSMUSG00000063511.12_45026251_45033309_1	chr7	-	724	4	ISM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	11857	374	10928	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGAACGTCGTCGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	45033309	45026250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227
ENSMUSG00000063511.12_45026251_45041559_1	chr7	-	882	7	ISM	ENSMUSG00000063511.12	ENST00000221448.9	1333	9	2678	235	2678	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGAACGTCGTCGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	45041559	45026250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45026676_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502
ENSMUSG00000063511.12_45026414_45041557_1	chr7	-	744	7	ISM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	3609	537	2680	-398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGTGGTGGTGGTGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	45041557	45026413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502
ENSMUSG00000063511.12_45026428_45044183_1	chr7	-	867	9	FSM	ENSMUSG00000063511.12	ENST00000221448.9	1333	9	54	412	54	-412	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGCGGTGGTGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	45044183	45026427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_45026676_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082
ENSMUSG00000063511.12_45026570_45044170_1	chr7	-	739	9	ISM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	996	693	67	-554	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGAGTCGAGACAAGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	45044170	45026569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082
ENSMUSG00000063511.12_45026779_45044981_1	chr7	-	725	9	ISM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	185	902	185	-763	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATTGGGCATCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	45044981	45026778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ENSMUSG00000063511.12_45030140_45045082_1	chr7	-	738	8	ISM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	84	4263	84	-4124	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCAGTATTCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	45045082	45030139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ENSMUSG00000063524.14_150321409_150329790_1	chr4	+	1061	7	ISM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	0	3546	0	-3540	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTAAAGACACTGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	150321408	150329790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571
ENSMUSG00000063524.14_150321697_150331122_1	chr4	+	873	8	ISM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	288	2214	288	-2208	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTATGACCTGGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	150321696	150331122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026
ENSMUSG00000063524.14_150323960_150332014_1	chr4	+	951	8	ISM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	2551	1322	2551	-1316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAGCGGATTGCCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	150323959	150332014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907
ENSMUSG00000063524.14_150326578_150332396_1	chr4	+	996	7	ISM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	5169	940	-1365	-934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGCTGCACACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	150326577	150332396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287
ENSMUSG00000063524.14_150329571_150333086_1	chr4	+	936	6	ISM	ENSMUSG00000063524.14	ENSMUST00000080149.6	1902	8	1628	244	1628	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCCAGTGCGTGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	150329570	150333086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ENSMUSG00000063524.14_150331088_150333336_1	chr4	+	901	5	ISM	ENSMUSG00000063524.14	ENSMUST00000080149.6	1902	8	3145	-6	3145	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGCATCTCATTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	150331087	150333336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ENSMUSG00000063550.9_101769393_101769985_1	chr7	-	506	2	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	89374	784	89089	-784	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAATGGTCAATAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	101769985	101769392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101769879_101769965
ENSMUSG00000063550.9_101769529_101772794_1	chr7	-	512	3	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	86565	920	86280	-920	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTTTCCTAATACTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	101772794	101769528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101769879_101769965_101770078_101772744
ENSMUSG00000063550.9_101769585_101772842_1	chr7	-	504	3	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	86517	976	86232	-976	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCAATCTCTGGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	101772842	101769584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101769879_101769965_101770078_101772744
ENSMUSG00000063550.9_101769699_101773431_1	chr7	-	519	4	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	85928	1090	85643	-1090	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTACCTTCGAGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	101773431	101769698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359
ENSMUSG00000063550.9_101769747_101773485_1	chr7	-	525	4	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	85874	1138	85589	-1138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCATGCCTGAGGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	101773485	101769746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359
ENSMUSG00000063550.9_101769801_101773541_1	chr7	-	527	4	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	85818	1192	85533	-1192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAGACCCTCAGCGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	101773541	101769800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359
ENSMUSG00000063550.9_101770020_101774368_1	chr7	-	514	4	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	84991	1411	84706	-1411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGGATAGAACAGATTCCG	NA	NA	NA	NA	NA	NA	NA	NA	101774368	101770019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101770078_101772744_101772900_101773359_101773602_101774309
ENSMUSG00000063550.9_101772845_101774514_1	chr7	-	502	3	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	84845	4236	84560	-4236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCAGAGCGCAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	101774514	101772844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101772900_101773359_101773602_101774309
ENSMUSG00000063550.9_101773405_101775747_1	chr7	-	510	3	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	83612	4796	83327	-4796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGAACCGCTGCCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	101775747	101773404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101773602_101774309_101774532_101775656
ENSMUSG00000063550.9_101773531_101777050_1	chr7	-	516	4	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	82309	4922	82024	-4922	internal_fragment	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGGAGGCGTTCCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	101777050	101773530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101773602_101774309_101774532_101775656_101775800_101776970
ENSMUSG00000063550.9_101774356_101778203_1	chr7	-	516	4	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	81156	5747	80871	-5747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGAGTGGGCCATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	101778203	101774355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101774532_101775656_101775800_101776970_101777115_101778150
ENSMUSG00000063550.9_101777069_101781877_1	chr7	-	510	4	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	77482	8460	77197	6341	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATTGGAAACGAACACTT	NA	NA	NA	NA	NA	NA	NA	NA	101781877	101777068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101777115_101778150_101778309_101779022_101779290_101781838
ENSMUSG00000063550.9_101778250_101782022_1	chr7	-	510	3	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	77337	9641	77052	5160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCACCATGCAGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	101782022	101778249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101778309_101779022_101779290_101781838
ENSMUSG00000063550.9_101779139_101783913_1	chr7	-	524	3	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	75446	10530	75161	4271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCAGATTGAAGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	101783913	101779138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101779290_101781838_101782069_101783770
ENSMUSG00000063550.9_101779195_101783963_1	chr7	-	518	3	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	75396	10586	75111	4215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGACTCTGGAGCGTAG	NA	NA	NA	NA	NA	NA	NA	NA	101783963	101779194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101779290_101781838_101782069_101783770
ENSMUSG00000063550.9_101781892_101784111_1	chr7	-	518	2	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	75248	13283	74963	1518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATGCAGATTGGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	101784111	101781891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101782069_101783770
ENSMUSG00000063550.9_101781952_101784193_1	chr7	-	540	2	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	75166	13343	74881	1458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCATGTAGATGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	101784193	101781951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101782069_101783770
ENSMUSG00000063550.9_101784129_101794866_1	chr7	-	512	4	ISM	ENSMUSG00000063550.9	ENSMUST00000211235.2	3748	23	64483	444	64208	-444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTCCCAGGACATCATCT	NA	NA	NA	NA	NA	NA	NA	NA	101794866	101784128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763
ENSMUSG00000063550.9_101788001_101796472_1	chr7	-	506	4	ISM	ENSMUSG00000063550.9	ENSMUST00000211235.2	3748	23	62877	4316	62602	-4316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCTGTTCTCCTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	101796472	101788000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101788093_101788674_101788858_101794763_101794929_101796406
ENSMUSG00000063550.9_101788767_101801595_1	chr7	-	505	4	ISM	ENSMUSG00000063550.9	ENSMUST00000211235.2	3748	23	57754	5082	57479	4986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAGAAGAGAGTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	101801595	101788766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101788858_101794763_101794929_101796406_101796585_101801524
ENSMUSG00000063550.9_101793753_101832772_1	chr7	-	2400	13	ISM	ENSMUSG00000063550.9	ENST00000397007.8	3529	21	26578	-8	26302	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCTTGTGTATGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	101832772	101793752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101793907_101794327_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669
ENSMUSG00000063550.9_101794364_101834096_1	chr7	-	2329	13	ISM	ENSMUSG00000063550.9	ENSMUST00000211005.2	3961	20	24978	611	24978	171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAGTAAATTGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	101834096	101794363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012
ENSMUSG00000063550.9_101794830_101841226_1	chr7	-	2349	16	ISM	ENSMUSG00000063550.9	ENSMUST00000211005.2	3961	20	17848	1077	17848	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTGCAGGCCAGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	101841226	101794829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109
ENSMUSG00000063550.9_101796444_101843960_1	chr7	-	2329	16	ISM	ENSMUSG00000063550.9	ENSMUST00000211005.2	3961	20	15114	2691	15114	-1909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTATCGGCCTGAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	101843960	101796443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867
ENSMUSG00000063550.9_101802342_101845095_1	chr7	-	2340	16	ISM	ENSMUSG00000063550.9	ENSMUST00000211005.2	3961	20	13979	8589	13979	-7807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTGAGTTTAAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	101845095	101802341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991
ENSMUSG00000063550.9_101818628_101834150_1	chr7	-	540	5	ISM	ENSMUSG00000063550.9	ENSMUST00000211022.2	3132	20	25207	24093	24924	-24093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGATTTAATACTTCGAC	NA	NA	NA	NA	NA	NA	NA	NA	101834150	101818627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012
ENSMUSG00000063550.9_101825570_101835139_1	chr7	-	505	5	ISM	ENSMUSG00000063550.9	ENSMUST00000211022.2	3132	20	24218	31035	23935	-31035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCAGCTGGAACTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	101835139	101825569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067
ENSMUSG00000063576.13_46985476_46988910_1	chr17	-	1291	8	ISM	ENSMUSG00000063576.13	ENST00000244670.12	1821	10	2906	4	2819	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCCTATTTCTGGCGAC	NA	NA	NA	NA	NA	NA	NA	NA	46988910	46985475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988857
ENSMUSG00000063576.13_46985624_46988953_1	chr17	-	1186	8	ISM	ENSMUSG00000063576.13	ENST00000244670.12	1821	10	2863	152	2776	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAGAGGAGCCTCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	46988953	46985623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988857
ENSMUSG00000063576.13_46985776_46988926_1	chr17	-	1123	9	ISM	ENSMUSG00000063576.13	ENSMUST00000071841.7	2100	12	2904	300	2803	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTGGGCCTTTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	46988926	46985775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857
ENSMUSG00000063576.13_46985778_46989263_1	chr17	-	1170	9	ISM	ENSMUSG00000063576.13	ENST00000244670.12	1821	10	2553	306	2466	-299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCTCCTGGGCCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	46989263	46985777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988857_46989035_46989206
ENSMUSG00000063576.13_46985824_46989320_1	chr17	-	1181	9	ISM	ENSMUSG00000063576.13	ENST00000244670.12	1821	10	2496	352	2409	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGGGCCCCTTCCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	46989320	46985823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988857_46989035_46989206
ENSMUSG00000063576.13_46985963_46991715_1	chr17	-	1229	10	FSM	ENSMUSG00000063576.13	ENST00000244670.12	1821	10	101	491	14	-484	multi-exon	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCTTCTCACCCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	46991715	46985962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988857_46989035_46989206_46989420_46991627
ENSMUSG00000063576.13_46986019_46991715_1	chr17	-	1173	10	FSM	ENSMUSG00000063576.13	ENST00000244670.12	1821	10	101	547	14	-540	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTAGGAAGTTTATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	46991715	46986018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988857_46989035_46989206_46989420_46991627
ENSMUSG00000063576.13_46986054_46991778_1	chr17	-	1201	10	FSM	ENSMUSG00000063576.13	ENST00000244670.12	1821	10	38	582	38	-575	multi-exon	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCAATATCAGCCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	46991778	46986053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988857_46989035_46989206_46989420_46991627
ENSMUSG00000063576.13_46986815_46989302_1	chr17	-	1357	10	ISM	ENSMUSG00000063576.13	ENSMUST00000233733.2	1854	12	2427	125	2427	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACATTCCTGCCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	46989302	46986814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46987148_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206
ENSMUSG00000063576.13_46987027_46990055_1	chr17	-	1350	11	ISM	ENSMUSG00000063576.13	ENSMUST00000233733.2	1854	12	1674	337	1674	-337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACGCTCAGAAGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	46990055	46987026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46987148_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967
ENSMUSG00000063576.13_46987429_46991715_1	chr17	-	1151	9	ISM	ENSMUSG00000063576.13	ENSMUST00000165007.9	1954	11	125	1950	14	-739	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTACTTATTTCTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	46991715	46987428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46991627
ENSMUSG00000063576.13_46987623_46991830_1	chr17	-	1191	8	ISM	ENSMUSG00000063576.13	ENSMUST00000165007.9	1954	11	10	2144	0	-933	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGGAGAGGGGGGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	46991830	46987622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46991627
ENSMUSG00000063576.13_46988970_46990089_1	chr17	-	400	3	ISM	ENSMUSG00000063576.13	ENSMUST00000233733.2	1854	12	1640	2280	1640	-2280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTACATGCGCTATGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	46990089	46988969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46989035_46989206_46989420_46989967
ENSMUSG00000063576.13_46989228_46991715_1	chr17	-	433	3	ISM	ENSMUSG00000063576.13	ENSMUST00000233733.2	1854	12	14	2538	14	-2538	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCACATTTTCAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	46991715	46989227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46989420_46989967_46990121_46991627
ENSMUSG00000063576.13_46989333_46991830_1	chr17	-	443	3	ISM	ENSMUSG00000063576.13	ENSMUST00000233733.2	1854	12	-101	2643	0	-2643	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGCCACGCAGGGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	46991830	46989332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46989420_46989967_46990121_46991627
ENSMUSG00000063600.15_29568055_29744347_1	chr3	+	1121	8	FSM	ENSMUSG00000063600.15	ENST00000431685.2	1140	8	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCCGATGATGGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	29568054	29744347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_29568160_29637055_29637179_29711278_29711417_29716525_29716649_29722389_29722588_29724714_29724852_29740786_29740946_29744209
ENSMUSG00000063605.6_95629497_95638282_1	chr8	-	1461	7	ISM	ENSMUSG00000063605.6	ENSMUST00000077955.6	2304	9	6444	0	6444	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGAGTTCTGAAAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	95638282	95629496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95630020_95631884_95631989_95632559_95632731_95634342_95634553_95634901_95635019_95636371_95636481_95638055
ENSMUSG00000063605.6_95629667_95639928_1	chr8	-	1509	8	ISM	ENSMUSG00000063605.6	ENSMUST00000077955.6	2304	9	4798	170	4798	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCCAACTGACAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	95639928	95629666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95630020_95631884_95631989_95632559_95632731_95634342_95634553_95634901_95635019_95636371_95636481_95638055_95638283_95639710
ENSMUSG00000063605.6_95629728_95639971_1	chr8	-	1491	8	ISM	ENSMUSG00000063605.6	ENSMUST00000077955.6	2304	9	4755	231	4755	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCCTGTGAAGGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	95639971	95629727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95630020_95631884_95631989_95632559_95632731_95634342_95634553_95634901_95635019_95636371_95636481_95638055_95638283_95639710
ENSMUSG00000063605.6_95629928_95640191_1	chr8	-	1511	8	ISM	ENSMUSG00000063605.6	ENSMUST00000077955.6	2304	9	4535	431	4535	-431	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGAGGATGAGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	95640191	95629927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95630020_95631884_95631989_95632559_95632731_95634342_95634553_95634901_95635019_95636371_95636481_95638055_95638283_95639710
ENSMUSG00000063605.6_95632571_95644726_1	chr8	-	1666	7	ISM	ENSMUSG00000063605.6	ENSMUST00000077955.6	2304	9	0	3074	0	-3074	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGGATGAGGTAAATATG	NA	NA	NA	NA	NA	NA	NA	NA	95644726	95632570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95632731_95634342_95634553_95634901_95635019_95636371_95636481_95638055_95638283_95639710_95640437_95644609
ENSMUSG00000063605.6_95632661_95644726_1	chr8	-	1576	7	ISM	ENSMUSG00000063605.6	ENSMUST00000077955.6	2304	9	0	3164	0	-3164	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACGCCAATCGGCGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	95644726	95632660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_95632731_95634342_95634553_95634901_95635019_95636371_95636481_95638055_95638283_95639710_95640437_95644609
ENSMUSG00000063646.19_37185840_37248899_1	chr5	+	796	3	ISM	ENSMUSG00000063646.19	ENST00000282924.9	2415	13	49	33742	49	-33742	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGGCGCACCAGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	37185839	37248899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37185944_37242579_37242843_37248470
ENSMUSG00000063646.19_37185853_37285958_1	chr5	+	1656	14	ISM	ENSMUSG00000063646.19	ENST00000409371.8	2233	19	62	19392	62	3315	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTAATCCAAGCGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	37185852	37285958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37185944_37242579_37242843_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220_37282320_37284720_37284823_37285348_37285403_37285934
ENSMUSG00000063646.19_37185899_37248953_1	chr5	+	791	3	ISM	ENSMUSG00000063646.19	ENST00000282924.9	2415	13	108	33688	108	-33688	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCGCAGACTGGTACGTGA	NA	NA	NA	NA	NA	NA	NA	NA	37185898	37248953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37185944_37242579_37242843_37248470
ENSMUSG00000063646.19_37242577_37292977_1	chr5	+	1757	15	ISM	ENSMUSG00000063646.19	ENSMUST00000174629.2	1941	18	-137	12368	-137	10334	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGACCGGAAGTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	37242576	37292977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37242843_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220_37282320_37284720_37284823_37285348_37285403_37285934_37286001_37291580_37291650_37292899
ENSMUSG00000063646.19_37242714_37259168_1	chr5	+	894	4	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	0	46177	0	-23473	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGATTCGGAAGCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	37242713	37259168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37242843_37248470_37248966_37257979_37258190_37259108
ENSMUSG00000063646.19_37242714_37299013_1	chr5	+	1677	16	ISM	ENSMUSG00000063646.19	ENSMUST00000174629.2	1941	18	0	6332	0	-6332	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCCAGTGAGGCACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	37242713	37299013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37242843_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220_37282320_37284720_37284823_37285348_37285403_37285934_37286001_37291580_37291650_37292899_37292978_37298956
ENSMUSG00000063646.19_37242714_37299028_1	chr5	+	1692	16	ISM	ENSMUSG00000063646.19	ENSMUST00000174629.2	1941	18	0	6317	0	-6317	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGCCAGCCAGCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	37242713	37299028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37242843_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220_37282320_37284720_37284823_37285348_37285403_37285934_37286001_37291580_37291650_37292899_37292978_37298956
ENSMUSG00000063646.19_37242714_37299072_1	chr5	+	1736	16	ISM	ENSMUSG00000063646.19	ENSMUST00000174629.2	1941	18	0	6273	0	-6273	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCGCAGACAGCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	37242713	37299072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37242843_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220_37282320_37284720_37284823_37285348_37285403_37285934_37286001_37291580_37291650_37292899_37292978_37298956
ENSMUSG00000063646.19_37248555_37262219_1	chr5	+	804	4	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	5841	43126	5841	-20422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAGAACGAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	37248554	37262219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156
ENSMUSG00000063646.19_37248695_37263006_1	chr5	+	800	5	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	5981	42339	5981	-19635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAGTCTGACCAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	37248694	37263006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954
ENSMUSG00000063646.19_37248839_37274817_1	chr5	+	837	7	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	6125	30528	6125	-7824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGAGTCCGTGGACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	37248838	37274817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785
ENSMUSG00000063646.19_37248907_37274847_1	chr5	+	799	7	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	6193	30498	6193	-7794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGACGTCCTACAACACGG	NA	NA	NA	NA	NA	NA	NA	NA	37248906	37274847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785
ENSMUSG00000063646.19_37257978_37300202_1	chr5	+	1763	16	ISM	ENSMUSG00000063646.19	ENSMUST00000174629.2	1941	18	15264	5143	-12893	-5143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGGACCGGGAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	37257977	37300202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220_37282320_37284720_37284823_37285348_37285403_37285934_37286001_37291580_37291650_37292899_37292978_37298956_37299161_37300136
ENSMUSG00000063646.19_37258001_37276138_1	chr5	+	802	7	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	15287	29207	-12870	-6503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGACCTGAGGTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	37258000	37276138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122
ENSMUSG00000063646.19_37258049_37276193_1	chr5	+	809	7	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	15335	29152	-12822	-6448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCCCTGCTTCAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	37258048	37276193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122
ENSMUSG00000063646.19_37258129_37305350_1	chr5	+	1668	17	ISM	ENSMUSG00000063646.19	ENSMUST00000174629.2	1941	18	15415	-5	-12742	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGCGCCGCCGAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	37258128	37305350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220_37282320_37284720_37284823_37285348_37285403_37285934_37286001_37291580_37291650_37292899_37292978_37298956_37299161_37300136_37300203_37305294
ENSMUSG00000063646.19_37258155_37278298_1	chr5	+	775	8	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	15441	27047	-12716	-4343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCCGACCTGCTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	37258154	37278298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284
ENSMUSG00000063646.19_37259206_37282239_1	chr5	+	795	9	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	16492	23106	-11665	-402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAACCAGCTAAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	37259205	37282239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ENSMUSG00000063646.19_37262156_37282368_1	chr5	+	902	8	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	19442	22977	-8715	-273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGCCCAAACTGAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	37262155	37282368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ENSMUSG00000063646.19_37264602_37282643_1	chr5	+	889	6	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	21888	22702	-6269	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	37264601	37282643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ENSMUSG00000063652.11_53841512_53842648_1	chr11	-	786	2	ISM	ENSMUSG00000063652.11	ENSMUST00000076493.11	3461	10	28510	721	28510	-721	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAACTAAGGTGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	53842648	53841511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_53842182_53842532
ENSMUSG00000063681.15_139126310_139168875_1	chr1	-	1394	5	ISM	ENSMUSG00000063681.15	ENST00000367399.6	3812	9	96471	0	14565	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGCTGCTCTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	139168875	139126309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139126526_139159401_139159529_139162464_139162594_139164559_139165467_139168860
ENSMUSG00000063681.15_139126368_139168938_1	chr1	-	1399	5	ISM	ENSMUSG00000063681.15	ENST00000367399.6	3812	9	96408	58	14502	-58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCGAGTGGAAATGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	139168938	139126367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139126526_139159401_139159529_139162464_139162594_139164559_139165467_139168860
ENSMUSG00000063681.15_139126417_139168997_1	chr1	-	1409	5	ISM	ENSMUSG00000063681.15	ENST00000367399.6	3812	9	96349	107	14443	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGCGACTCAAGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	139168997	139126416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139126526_139159401_139159529_139162464_139162594_139164559_139165467_139168860
ENSMUSG00000063681.15_139159402_139170809_1	chr1	-	1423	5	ISM	ENSMUSG00000063681.15	ENST00000367399.6	3812	9	94537	33092	12631	-2126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCGGCCTTTCCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	139170809	139159401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139159529_139162464_139162594_139164559_139165467_139168860_139169027_139170715
ENSMUSG00000063681.15_139162177_139164750_1	chr1	-	608	2	ISM	ENSMUSG00000063681.15	ENST00000367397.1	3400	6	18690	253	18690	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTCCCCACACTAACTC	NA	NA	NA	NA	NA	NA	NA	NA	139164750	139162176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139162594_139164559
ENSMUSG00000063681.15_139162276_139164826_1	chr1	-	585	2	ISM	ENSMUSG00000063681.15	ENST00000367397.1	3400	6	18614	352	18614	-352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTACCAGCCAAGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	139164826	139162275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139162594_139164559
ENSMUSG00000063681.15_139162322_139164888_1	chr1	-	601	2	ISM	ENSMUSG00000063681.15	ENST00000367397.1	3400	6	18552	398	18552	-398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GCAATAAAAAAGAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	139164888	139162321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139162594_139164559
ENSMUSG00000063681.15_139162502_139170965_1	chr1	-	1415	4	ISM	ENSMUSG00000063681.15	ENST00000367397.1	3400	6	12475	578	12475	-578	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAATGTATGTGCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	139170965	139162501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139162594_139164559_139165467_139168860_139169027_139170715
ENSMUSG00000063681.15_139164999_139176084_1	chr1	-	1410	4	ISM	ENSMUSG00000063681.15	ENST00000367397.1	3400	6	7356	3075	7356	-3075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATATCTTTCTTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	139176084	139164998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139165467_139168860_139169027_139170715_139171264_139175856
ENSMUSG00000063681.15_139165061_139176142_1	chr1	-	1406	4	ISM	ENSMUSG00000063681.15	ENST00000367397.1	3400	6	7298	3137	7298	-3137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCAATCTGTTGACAATC	NA	NA	NA	NA	NA	NA	NA	NA	139176142	139165060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139165467_139168860_139169027_139170715_139171264_139175856
ENSMUSG00000063681.15_139165173_139170884_1	chr1	-	629	3	ISM	ENSMUSG00000063681.15	ENST00000367397.1	3400	6	12556	3249	12556	-3249	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACCTCCCGGTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	139170884	139165172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139165467_139168860_139169027_139170715
ENSMUSG00000063681.15_139165196_139176276_1	chr1	-	1405	4	ISM	ENSMUSG00000063681.15	ENST00000367397.1	3400	6	7164	3272	7164	-3272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCCATGATAGACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	139176276	139165195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139165467_139168860_139169027_139170715_139171264_139175856
ENSMUSG00000063681.15_139168858_139176578_1	chr1	-	1439	3	ISM	ENSMUSG00000063681.15	ENST00000367397.1	3400	6	6862	6934	6862	6544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGCATTCAAAGCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	139176578	139168857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139169027_139170715_139171264_139175856
ENSMUSG00000063681.15_139171107_139264880_1	chr1	-	1410	4	ISM	ENSMUSG00000063681.15	ENST00000367399.6	3812	9	466	44797	466	4295	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGTCTGGCTAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	139264880	139171106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139171264_139175856_139176814_139242308_139242492_139264767
ENSMUSG00000063681.15_139171159_139264935_1	chr1	-	1413	4	ISM	ENSMUSG00000063681.15	ENST00000367399.6	3812	9	411	44849	411	4243	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTCAACCCCTGGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	139264935	139171158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139171264_139175856_139176814_139242308_139242492_139264767
ENSMUSG00000063681.15_139171223_139264989_1	chr1	-	1403	4	ISM	ENSMUSG00000063681.15	ENST00000367399.6	3812	9	357	44913	357	4179	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCGGCCTTTAGTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	139264989	139171222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139171264_139175856_139176814_139242308_139242492_139264767
ENSMUSG00000063681.15_139176044_139265219_1	chr1	-	1405	3	ISM	ENSMUSG00000063681.15	ENST00000367399.6	3812	9	127	49734	127	-642	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATTTGAATCACATTAC	NA	NA	NA	NA	NA	NA	NA	NA	139265219	139176043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139176814_139242308_139242492_139264767
ENSMUSG00000063681.15_139176104_139265277_1	chr1	-	1403	3	ISM	ENSMUSG00000063681.15	ENST00000367399.6	3812	9	69	49794	69	-702	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAACATCTATAATGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	139265277	139176103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139176814_139242308_139242492_139264767
ENSMUSG00000063681.15_139176298_139183363_1	chr1	-	591	2	ISM	ENSMUSG00000063681.15	ENST00000367397.1	3400	6	77	14374	77	-896	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGGAGAATGGCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	139183363	139176297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_139176814_139183288
ENSMUSG00000063694.6_50540369_50542485_1	chr6	-	2011	2	ISM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	1033	826	1033	-826	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAAGGGGCCTCGTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	50542485	50540368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_50542366_50542471
ENSMUSG00000063694.6_50540423_50542597_1	chr6	-	2069	2	ISM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	921	880	921	-880	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATATATAGACATTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	50542597	50540422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_50542366_50542471
ENSMUSG00000063694.6_50540423_50543518_1	chr6	-	2243	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	0	880	0	-880	multi-exon	FALSE	canonical	NA	NA	NA	NA	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATATATAGACATTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	50543518	50540422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_50542366_50542471_50542649_50543395
ENSMUSG00000063694.6_50540549_50543518_1	chr6	-	2117	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	0	1006	0	-1006	multi-exon	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACAGCCTGGGCTACAC	NA	NA	NA	NA	NA	NA	NA	NA	50543518	50540548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_50542366_50542471_50542649_50543395
ENSMUSG00000063698.10_60827186_60839465_1	chr19	-	576	4	ISM	ENSMUSG00000063698.10	ENSMUST00000135808.8	1309	14	10452	0	10452	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCAAAAGGTATACCTTA	NA	NA	NA	NA	NA	NA	NA	NA	60839465	60827185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396
ENSMUSG00000063704.14_75866695_75868347_1	chr15	+	672	5	FSM	ENSMUSG00000063704.14	ENST00000395107.8	674	5	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTCCATGGAGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	75866694	75868347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_75866793_75867063_75867178_75867634_75867807_75867889_75868054_75868223
ENSMUSG00000063704.14_75866695_75869798_1	chr15	+	961	8	FSM	ENSMUSG00000063704.14	ENST00000338033.9	961	8	2	-2	2	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATCGTCCGCTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	75866694	75869798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_75866793_75867063_75867174_75867675_75867807_75867889_75868054_75868223_75868364_75868959_75869018_75869418_75869557_75869676
ENSMUSG00000063704.14_75866695_75869798_2	chr15	+	957	8	NNC	ENSMUSG00000063704.14	novel	961	8	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATCGTCCGCTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	75866694	75869798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_75866793_75867063_75867174_75867675_75867807_75867893_75868054_75868223_75868364_75868959_75869018_75869418_75869557_75869676
ENSMUSG00000063704.14_75866695_75869798_3	chr15	+	954	8	NNC	ENSMUSG00000063704.14	novel	961	8	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATCGTCCGCTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	75866694	75869798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_75866793_75867063_75867174_75867675_75867807_75867889_75868054_75868223_75868364_75868959_75869018_75869425_75869557_75869676
ENSMUSG00000063704.14_75866695_75869798_4	chr15	+	955	8	NNC	ENSMUSG00000063704.14	novel	961	8	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	955	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATCGTCCGCTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	75866694	75869798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_+_75866793_75867069_75867174_75867675_75867807_75867889_75868054_75868223_75868364_75868959_75869018_75869418_75869557_75869676
ENSMUSG00000063785.13_47345774_47363995_1	chrX	+	1318	11	ISM	ENSMUSG00000063785.13	ENSMUST00000080713.5	2507	15	35	7335	35	-7322	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGATCCCTTAGGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	47345773	47363995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677
ENSMUSG00000063785.13_47347216_47367439_1	chrX	+	1755	11	ISM	ENSMUSG00000063785.13	ENST00000425117.6	2233	13	1	3878	1	-3878	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAGAACAAAAAAAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	47347215	47367439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243
ENSMUSG00000063785.13_47347231_47366145_1	chrX	+	1349	11	ISM	ENSMUSG00000063785.13	ENSMUST00000080713.5	2507	15	1492	5185	16	-5172	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTCAGTAAGGAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	47347230	47366145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098
ENSMUSG00000063785.13_47349461_47367652_1	chrX	+	1715	10	ISM	ENSMUSG00000063785.13	ENST00000425117.6	2233	13	2246	3665	2246	-3665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTCTCTCCACTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	47349460	47367652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47349528_47351771_47351915_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544
ENSMUSG00000063785.13_47351770_47370989_1	chrX	+	1693	10	ISM	ENSMUSG00000063785.13	ENST00000425117.6	2233	13	4555	328	4555	-328	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAGAATCCTATAGGATC	NA	NA	NA	NA	NA	NA	NA	NA	47351769	47370989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47351915_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ENSMUSG00000063785.13_47351866_47366382_1	chrX	+	1294	8	ISM	ENSMUSG00000063785.13	ENSMUST00000080713.5	2507	15	6127	4948	4651	-4935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCACTCCAAGGGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	47351865	47366382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47351915_47352353_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098
ENSMUSG00000063785.13_47352411_47367317_1	chrX	+	1376	8	ISM	ENSMUSG00000063785.13	ENSMUST00000080713.5	2507	15	6672	4013	5196	-4000	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTAAAAGAGAAGAGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	47352410	47367317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243
ENSMUSG00000063785.13_47361722_47371131_1	chrX	+	1645	9	ISM	ENSMUSG00000063785.13	ENST00000425117.6	2233	13	14507	186	14507	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGCCTGTCATGCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	47361721	47371131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ENSMUSG00000063785.13_47361764_47371193_1	chrX	+	1665	9	ISM	ENSMUSG00000063785.13	ENST00000425117.6	2233	13	14549	124	14549	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCTATAGGTTGAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	47361763	47371193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ENSMUSG00000063785.13_47361897_47371330_1	chrX	+	1771	8	ISM	ENSMUSG00000063785.13	ENST00000425117.6	2233	13	14682	-13	14682	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACTACCTTCTGTATTA	NA	NA	NA	NA	NA	NA	NA	NA	47361896	47371330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ENSMUSG00000063787.5_20753074_20754493_1	chr14	+	608	3	NNC	ENSMUSG00000063787.5	novel	616	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCATTTCTTCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	20753073	20754493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_20753266_20753357_20753477_20754196
ENSMUSG00000063801.8_79525507_79565006_1	chr7	-	5146	4	ISM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	5391	434	5391	-434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGACAGGAGAGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	79565006	79525506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894
ENSMUSG00000063801.8_79525663_79570344_1	chr7	-	5170	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	53	590	53	-590	multi-exon	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCCACGGTACCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	79570344	79525662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
ENSMUSG00000063802.6_4663520_4667857_1	chr7	-	690	4	ISM	ENSMUSG00000063802.6	ENST00000433386.7	1475	8	20110	-15	20110	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTATGCTGTCTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	4667857	4663519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701
ENSMUSG00000063802.6_4663744_4680930_1	chr7	-	691	5	ISM	ENSMUSG00000063802.6	ENST00000433386.7	1475	8	7037	209	7037	-209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGGAACCCCAGGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	4680930	4663743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705
ENSMUSG00000063802.6_4666422_4684919_1	chr7	-	625	5	ISM	ENSMUSG00000063802.6	ENST00000433386.7	1475	8	3048	2887	3048	-2887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCACCGCTGCCAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	4684919	4666421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842
ENSMUSG00000063802.6_4666472_4684970_1	chr7	-	626	5	ISM	ENSMUSG00000063802.6	ENST00000433386.7	1475	8	2997	2937	2997	-2937	internal_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTGTTCGTGAATGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	4684970	4666471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842
ENSMUSG00000063802.6_4667701_4687296_1	chr7	-	613	4	ISM	ENSMUSG00000063802.6	ENST00000433386.7	1475	8	671	4166	671	-4166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCAGATGGCCTGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	4687296	4667700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4667858_4680705_4680931_4684842_4685048_4687270
ENSMUSG00000063802.6_4667746_4687354_1	chr7	-	626	4	ISM	ENSMUSG00000063802.6	ENST00000433386.7	1475	8	613	4211	613	-4211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGCTGCAGAACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	4687354	4667745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4667858_4680705_4680931_4684842_4685048_4687270
ENSMUSG00000063802.6_4667805_4687401_1	chr7	-	614	4	ISM	ENSMUSG00000063802.6	ENST00000433386.7	1475	8	566	4270	566	-4270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTGCTGATGCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	4687401	4667804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4667858_4680705_4680931_4684842_4685048_4687270
ENSMUSG00000063802.6_4680706_4687507_1	chr7	-	667	3	ISM	ENSMUSG00000063802.6	ENST00000433386.7	1475	8	460	17171	460	-17171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTTCCCGGATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	4687507	4680705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4680931_4684842_4685048_4687270
ENSMUSG00000063802.6_4680836_4687980_1	chr7	-	683	4	ISM	ENSMUSG00000063802.6	ENST00000433386.7	1475	8	-13	17301	-13	-17301	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAGTCAGAACGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	4687980	4680835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4680931_4684842_4685048_4687270_4687566_4687892
ENSMUSG00000063802.6_4687304_4688067_1	chr7	-	440	2	ISM	ENSMUSG00000063802.6	ENSMUST00000079970.6	1593	8	0	23784	0	-23769	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACCCCCCTCCAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	4688067	4687303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4687569_4687892
ENSMUSG00000063838.7_4154259_4167721_2	chr7	-	887	3	FSM	ENSMUSG00000063838.7	ENSMUST00000076831.7	1025	3	138	0	138	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTATTCACTTTACGC	NA	NA	NA	NA	NA	NA	NA	NA	4167721	4154258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_4154787_4167091_4167187_4167457
ENSMUSG00000063849.7_57321911_57342337_1	chr9	-	549	4	FSM	ENSMUSG00000063849.7	ENST00000567336.1	549	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGATGCCCCTGCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	57342337	57321910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_57322010_57322368_57322538_57327445_57327575_57342185
ENSMUSG00000063849.7_57321997_57328431_1	chr9	-	205	3	ISM	ENSMUSG00000063849.7	ENST00000568649.5	516	4	13906	86	13906	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAAGTGGAGACCATTG	NA	NA	NA	NA	NA	NA	NA	NA	57328431	57321996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_57322010_57322368_57322538_57328408
ENSMUSG00000063856.9_108216475_108217468_1	chr9	+	638	2	FSM	ENSMUSG00000063856.9	ENST00000643797.1	601	2	-37	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCATTCCCGATGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	108216474	108217468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108216620_108216975
ENSMUSG00000063884.7_71857624_71872949_1	chr6	-	1831	15	ISM	ENSMUSG00000063884.7	ENSMUST00000082094.5	2581	24	12785	0	12785	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	71872949	71857623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866354_71866577_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888
ENSMUSG00000063884.7_71857767_71874136_1	chr6	-	1755	16	ISM	ENSMUSG00000063884.7	ENSMUST00000082094.5	2581	24	11598	143	11598	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGTTGATCGTATCCCG	NA	NA	NA	NA	NA	NA	NA	NA	71874136	71857766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866354_71866577_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096
ENSMUSG00000063884.7_71858117_71879919_1	chr6	-	1741	19	ISM	ENSMUSG00000063884.7	ENSMUST00000082094.5	2581	24	5815	493	5815	-493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTGCTGGAATGTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	71879919	71858116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866354_71866577_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839
ENSMUSG00000063888.8_47086510_47089054_1	chr17	-	230	2	ISM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	4528	1677	3754	61	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTCCATGGAAGGACGA	NA	NA	NA	NA	NA	NA	NA	NA	47089054	47086509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47086663_47088977
ENSMUSG00000063888.8_47086569_47090350_1	chr17	-	505	4	ISM	ENSMUSG00000063888.8	ENST00000493763.7	762	6	2458	-2	2458	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCTTGGGCCTAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	47090350	47086568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47086595_47088968_47089198_47089335_47089446_47090210
ENSMUSG00000063888.8_47086604_47089169_1	chr17	-	251	2	ISM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	4413	1771	3639	-33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGAAGATTATTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	47089169	47086603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47086663_47088977
ENSMUSG00000063888.8_47088969_47091367_1	chr17	-	528	4	ISM	ENSMUSG00000063888.8	ENSMUST00000233192.2	1310	6	2215	525	1441	-525	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGCTGCCTGCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	47091367	47088968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47089198_47089335_47089446_47090210_47090349_47091316
ENSMUSG00000063888.8_47089100_47091367_1	chr17	-	397	4	ISM	ENSMUSG00000063888.8	ENSMUST00000233192.2	1310	6	2215	656	1441	-656	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGTGGCCCGCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	47091367	47089099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47089198_47089335_47089446_47090210_47090349_47091316
ENSMUSG00000063888.8_47089164_47092758_1	chr17	-	493	5	ISM	ENSMUSG00000063888.8	ENSMUST00000233192.2	1310	6	824	720	50	-720	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGAAATTGCCTTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	47092758	47089163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708
ENSMUSG00000063889.17_3266957_3325474_1	chr18	-	1285	5	FSM	ENSMUSG00000063889.17	ENST00000348787.6	1376	5	0	91	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATGTAGTATGTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	3325474	3266956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_3267733_3273421_3273579_3295039_3295183_3295321_3295417_3325360
ENSMUSG00000063889.17_3267633_3295373_1	chr18	-	677	6	ISM	ENSMUSG00000063889.17	ENSMUST00000122958.8	2254	8	4186	1277	4079	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCTTGAAACTTTGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	3295373	3267632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_3267733_3273421_3273579_3276693_3276730_3287903_3288093_3295039_3295183_3295321
ENSMUSG00000063889.17_3267633_3295374_1	chr18	-	667	5	NNC	ENSMUSG00000063889.17	novel	1160	6	NA	NA	4078	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCTTGAAACTTTGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	3295374	3267632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_3267733_3273421_3273604_3287903_3288093_3295039_3295183_3295321
ENSMUSG00000063889.17_3267985_3295182_1	chr18	-	445	3	ISM	ENSMUSG00000063889.17	ENST00000374734.7	657	5	30295	0	4270	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTGATTTGGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	3295182	3267984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_3268130_3273421_3273579_3295039
ENSMUSG00000063889.17_3267985_3325474_1	chr18	-	843	6	FSM	ENSMUSG00000063889.17	ENST00000337656.8	846	6	3	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTGATTTGGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	3325474	3267984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_3268130_3273421_3273579_3287903_3288093_3295039_3295183_3295321_3295417_3325360
ENSMUSG00000063889.17_3267985_3325474_2	chr18	-	838	6	NNC	ENSMUSG00000063889.17	novel	846	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTGATTTGGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	3325474	3267984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_3268125_3273421_3273579_3287903_3288093_3295039_3295183_3295321_3295417_3325360
ENSMUSG00000063889.17_3273421_3325478_1	chr18	-	739	6	ISM	ENSMUSG00000063889.17	ENST00000479070.5	885	7	-1	5836	-1	-5436	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTACTGGGTAATCTAG	NA	NA	NA	NA	NA	NA	NA	NA	3325478	3273420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_-_3273579_3276693_3276730_3287903_3288093_3295039_3295183_3295321_3295417_3325360
ENSMUSG00000063904.5_4957257_4959942_1	chr19	-	638	2	ISM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	18373	0	18333	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGTATGTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	4959942	4957256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4957826_4959873
ENSMUSG00000063904.5_4957403_4960032_1	chr19	-	582	2	ISM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	18283	146	18243	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGGTGGCAATTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	4960032	4957402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4957826_4959873
ENSMUSG00000063904.5_4957697_4964856_1	chr19	-	612	5	ISM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	13459	440	13419	-440	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGGAGGAACCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	4964856	4957696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837
ENSMUSG00000063904.5_4957741_4964923_1	chr19	-	635	5	ISM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	13392	484	13352	-484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTTGGAGGAGGTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	4964923	4957740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837
ENSMUSG00000063904.5_4957807_4964962_1	chr19	-	608	5	ISM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	13353	550	13313	-550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTATGAGGCCTCAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	4964962	4957806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837
ENSMUSG00000063904.5_4959963_4966364_1	chr19	-	621	6	ISM	ENSMUSG00000063904.5	ENST00000530165.5	1985	16	11911	90	11911	-90	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGAGTGCTTCCTTACCC	NA	NA	NA	NA	NA	NA	NA	NA	4966364	4959962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306
ENSMUSG00000063904.5_4963943_4966963_1	chr19	-	597	7	ISM	ENSMUSG00000063904.5	ENST00000530165.5	1985	16	11312	4070	11312	-4070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAAGCTGGCGAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	4966963	4963942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919
ENSMUSG00000063904.5_4964636_4967039_1	chr19	-	607	6	ISM	ENSMUSG00000063904.5	ENST00000530165.5	1985	16	11236	4763	11236	-4763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCAGAGGCAGCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	4967039	4964635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919
ENSMUSG00000063904.5_4964928_4968092_1	chr19	-	603	7	ISM	ENSMUSG00000063904.5	ENST00000530165.5	1985	16	10183	5055	10183	-5055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAAATTCAGCACCATTG	NA	NA	NA	NA	NA	NA	NA	NA	4968092	4964927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047
ENSMUSG00000063904.5_4966342_4968319_1	chr19	-	603	6	ISM	ENSMUSG00000063904.5	ENST00000530165.5	1985	16	9956	6469	9956	-6469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGGCCATGGCAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	4968319	4966341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272
ENSMUSG00000063904.5_4966782_4971221_1	chr19	-	626	6	ISM	ENSMUSG00000063904.5	ENST00000530165.5	1985	16	7054	6909	7054	-6909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCCTATGCCGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	4971221	4966781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168
ENSMUSG00000063904.5_4966978_4973118_1	chr19	-	651	7	ISM	ENSMUSG00000063904.5	ENST00000530165.5	1985	16	5157	7105	5157	-7105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACGTCCTCACCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	4973118	4966977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094
ENSMUSG00000063904.5_4967067_4973152_1	chr19	-	596	7	ISM	ENSMUSG00000063904.5	ENST00000530165.5	1985	16	5123	7194	5123	-7194	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCGAGTGCTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	4973152	4967066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094
ENSMUSG00000063904.5_4968048_4976844_1	chr19	-	601	6	ISM	ENSMUSG00000063904.5	ENST00000530165.5	1985	16	1431	8175	1431	-8175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGCCAGCCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	4976844	4968047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4976812
ENSMUSG00000063904.5_4968087_4973771_1	chr19	-	590	6	ISM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	4544	10830	4504	-8214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTTCTGGATTCAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	4973771	4968086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711
ENSMUSG00000063904.5_4968272_4976844_1	chr19	-	561	6	ISM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	1471	11015	1431	-8399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTGGCTGGAGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	4976844	4968271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812
ENSMUSG00000063904.5_4971199_4977091_1	chr19	-	646	5	ISM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	1224	13942	1184	-11326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGCGGCTGGCTTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	4977091	4971198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812
ENSMUSG00000063904.5_4971199_4977091_2	chr19	-	556	4	ISM	ENSMUSG00000063904.5	ENST00000530165.5	1985	16	1184	11326	1184	-11326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGCGGCTGGCTTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	4977091	4971198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4971263_4972349_4972425_4973094_4973233_4976812
ENSMUSG00000063904.5_4972350_4978315_1	chr19	-	646	5	ISM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	0	15093	0	-12477	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGGAATTGGCAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	4978315	4972349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ENSMUSG00000063931.15_34620786_34743750_1	chr7	+	1262	12	NNC	ENSMUSG00000063931.15	novel	1392	12	NA	NA	19	-106	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGCGACAAGGCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	34620785	34743750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743302_34743655
ENSMUSG00000063931.15_34620862_34743750_1	chr7	+	1191	12	FSM	ENSMUSG00000063931.15	ENST00000397032.8	1392	12	95	106	95	-106	multi-exon	FALSE	canonical	NA	NA	NA	NA	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGCGACAAGGCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	34620861	34743750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655
ENSMUSG00000063931.15_34620862_34743856_1	chr7	+	1292	12	NNC	ENSMUSG00000063931.15	novel	1392	12	NA	NA	95	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGGCACCCCAAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	34620861	34743856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743302_34743655
ENSMUSG00000063931.15_34620862_34743856_2	chr7	+	1297	12	FSM	ENSMUSG00000063931.15	ENST00000397032.8	1392	12	95	0	95	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGGCACCCCAAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	34620861	34743856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655
ENSMUSG00000063931.15_34623803_34669005_1	chr7	+	426	6	ISM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	11999	75128	3036	-74851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGGGCACCGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	34623802	34669005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34668929
ENSMUSG00000063931.15_34623803_34743856_1	chr7	+	1222	11	NNC	ENSMUSG00000063931.15	novel	1392	12	NA	NA	3036	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGGCACCCCAAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	34623802	34743856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34720389_34720459_34721117_34721196_34730767_34730917_34740097_34740281_34743114_34743307_34743655
ENSMUSG00000063931.15_34623803_34743856_2	chr7	+	1223	11	NNC	ENSMUSG00000063931.15	novel	1392	12	NA	NA	3036	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGGCACCCCAAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	34623802	34743856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34720389_34720459_34721117_34721196_34730768_34730917_34740095_34740281_34743114_34743307_34743655
ENSMUSG00000063931.15_34634121_34720438_1	chr7	+	377	7	ISM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	22317	23695	13354	-23418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGTATCTGCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	34634120	34720438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34668929_34669006_34671081_34671129_34720389
ENSMUSG00000063931.15_34642092_34721171_1	chr7	+	373	7	ISM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	30288	22962	21325	-22685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGATCAAGGATGGAGATA	NA	NA	NA	NA	NA	NA	NA	NA	34642091	34721171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_34642112_34645011_34645074_34653982_34654028_34668929_34669006_34671081_34671129_34720389_34720459_34721117
ENSMUSG00000063972.14_38617617_38621131_1	chr2	-	538	3	ISM	ENSMUSG00000063972.14	ENSMUST00000168098.8	5877	9	53396	4231	53396	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCAGATGCATTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	38621131	38617616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_38617928_38619494_38619648_38621057
ENSMUSG00000063972.14_38617794_38628970_1	chr2	-	481	4	ISM	ENSMUSG00000063972.14	ENSMUST00000168098.8	5877	9	45557	4408	45557	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCACAGGCTCCAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	38628970	38617793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898
ENSMUSG00000063972.14_38617843_38629026_1	chr2	-	488	4	ISM	ENSMUSG00000063972.14	ENSMUST00000168098.8	5877	9	45501	4457	45501	-226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACCTGTGCCCTGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	38629026	38617842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898
ENSMUSG00000063972.14_38617890_38629082_1	chr2	-	497	4	ISM	ENSMUSG00000063972.14	ENSMUST00000168098.8	5877	9	45445	4504	45445	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTAAGGTGGTGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	38629082	38617889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898
ENSMUSG00000063972.14_38619596_38630476_1	chr2	-	514	4	ISM	ENSMUSG00000063972.14	ENSMUST00000168098.8	5877	9	44051	6210	44051	-1979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTACATTTGTCAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	38630476	38619595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_38619648_38621057_38621180_38628898_38629154_38630391
ENSMUSG00000063972.14_38628899_38630618_1	chr2	-	482	2	ISM	ENSMUSG00000063972.14	ENSMUST00000168098.8	5877	9	43909	15513	43909	-11282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGCGCTGAACTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	38630618	38628898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_38629154_38630391
ENSMUSG00000063972.14_38629016_38632969_1	chr2	-	517	3	ISM	ENSMUSG00000063972.14	ENSMUST00000168098.8	5877	9	41558	15630	41558	-11399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACGTGGCAGGAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	38632969	38629015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_38629154_38630391_38630620_38632818
ENSMUSG00000063972.14_38630436_38650309_1	chr2	-	506	4	ISM	ENSMUSG00000063972.14	ENSMUST00000168098.8	5877	9	24218	17050	24218	-12819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACCTGGAGCCATTGGG	NA	NA	NA	NA	NA	NA	NA	NA	38650309	38630435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_38630620_38632818_38632974_38638847_38638904_38650198
ENSMUSG00000063972.14_38630555_38650441_1	chr2	-	519	4	ISM	ENSMUSG00000063972.14	ENSMUST00000168098.8	5877	9	24086	17169	24086	-12938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATTATCAATACATACCA	NA	NA	NA	NA	NA	NA	NA	NA	38650441	38630554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_38630620_38632818_38632974_38638847_38638904_38650198
ENSMUSG00000063972.14_38632817_38775249_1	chr2	-	498	4	ISM	ENSMUSG00000063972.14	ENST00000344523.8	1831	10	41149	15200	40980	-15200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCTAAAAGTAACCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	38775249	38632816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_38632974_38638847_38638904_38650198_38650442_38775207
ENSMUSG00000063972.14_38632969_38816229_1	chr2	-	446	5	ISM	ENSMUSG00000063972.14	ENST00000344523.8	1831	10	169	15352	0	-15352	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGAAATTGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	38816229	38632968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_38632974_38638847_38638904_38650198_38650442_38775207_38775250_38816129
ENSMUSG00000063972.14_38650337_38816246_1	chr2	-	252	3	ISM	ENSMUSG00000063972.14	ENST00000416460.6	1875	10	167	32761	-17	-32720	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAAGAGGAGCATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	38816246	38650336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_38650430_38775207_38775250_38816129
ENSMUSG00000063972.14_38650398_38816293_1	chr2	-	238	3	ISM	ENSMUSG00000063972.14	ENST00000416460.6	1875	10	120	32822	-64	-32781	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGGACCGCGCTACGGG	NA	NA	NA	NA	NA	NA	NA	NA	38816293	38650397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_38650430_38775207_38775250_38816129
ENSMUSG00000064023.5_43447949_43451637_1	chr7	+	656	3	ISM	ENSMUSG00000064023.5	ENST00000391806.6	926	5	466	1557	466	-1557	internal_fragment	FALSE	canonical	NA	NA	NA	NA	863	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCAACCTCCAGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	43447948	43451637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_43448208_43448488_43448752_43451503
ENSMUSG00000064023.5_43448179_43453246_1	chr7	+	635	4	ISM	ENSMUSG00000064023.5	ENST00000391806.6	926	5	696	-52	696	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGACTGTGCTTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	43448178	43453246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_43448208_43448488_43448752_43451503_43451638_43453037
ENSMUSG00000064037.14_31652138_31662319_1	chr5	+	719	10	ISM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	53	7929	41	7259	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCACCGGCTTCGATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	31652137	31662319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296
ENSMUSG00000064037.14_31652859_31663576_1	chr5	+	732	10	ISM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	774	6672	762	-6672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGGTAGATGATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	31652858	31663576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536
ENSMUSG00000064037.14_31654654_31664908_1	chr5	+	727	10	ISM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	2569	5340	2557	-5340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGGAAGTGGATCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	31654653	31664908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817
ENSMUSG00000064037.14_31656609_31666750_1	chr5	+	729	9	ISM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	4524	3498	4512	-3498	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGGCAGCCGGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	31656608	31666750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642
ENSMUSG00000064037.14_31658455_31668203_1	chr5	+	639	8	ISM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	6370	2045	6358	-2045	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAGAACTTCATGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	31658454	31668203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ENSMUSG00000064037.14_31660732_31668307_1	chr5	+	650	7	ISM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	8647	1941	8635	-1941	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTCCTGTGAACCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	31660731	31668307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ENSMUSG00000064037.14_31661283_31668413_1	chr5	+	680	6	ISM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	9198	1835	9186	-1835	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGGATGCCCATTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	31661282	31668413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ENSMUSG00000064037.14_31661346_31668454_1	chr5	+	658	6	ISM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	9261	1794	9249	-1794	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGGATGTATTCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	31661345	31668454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ENSMUSG00000064037.14_31664854_31668686_1	chr5	+	674	3	ISM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	12769	1562	12757	-1562	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGCTCACACGAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	31664853	31668686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31664909_31666642_31666751_31668175
ENSMUSG00000064037.14_31666735_31668812_1	chr5	+	653	2	ISM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	14650	1436	14638	-1436	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATAGATTTCCCACTATT	NA	NA	NA	NA	NA	NA	NA	NA	31666734	31668812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31666751_31668175
ENSMUSG00000064061.14_48746242_48762083_1	chr16	-	1299	11	ISM	ENSMUSG00000064061.14	ENSMUST00000114516.8	3331	31	52221	0	52221	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAAACCAAAGCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	48762083	48746241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014
ENSMUSG00000064068.16_89116388_89120069_1	chr3	-	926	6	NNC	ENSMUSG00000064068.16	novel	1522	8	NA	NA	1145	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGAATCCCTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	89120069	89116387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117981_89119989
ENSMUSG00000064068.16_89116635_89121133_1	chr3	-	763	8	NNC	ENSMUSG00000064068.16	novel	1522	8	NA	NA	81	-236	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCAGCCATGGTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	89121133	89116634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117981_89119989_89120070_89120183_89120254_89121119
ENSMUSG00000064068.16_89116953_89121350_1	chr3	-	745	7	NNC	ENSMUSG00000064068.16	novel	1522	8	NA	NA	-136	-554	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCTTTGTTTTTAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	89121350	89116952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_89116967_89117413_89117491_89117572_89117756_89117890_89117981_89119989_89120070_89120183_89120254_89121119
ENSMUSG00000064068.16_89116953_89121402_1	chr3	-	797	7	NNC	ENSMUSG00000064068.16	novel	1522	8	NA	NA	-188	-554	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCTTTGTTTTTAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	89121402	89116952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_89116967_89117413_89117491_89117572_89117756_89117890_89117981_89119989_89120070_89120183_89120254_89121119
ENSMUSG00000064080.13_91189703_91210310_1	chr6	+	446	2	ISM	ENSMUSG00000064080.13	ENSMUST00000113498.9	4644	17	266	39211	266	-38555	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTCCTACTTTGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	91189702	91210310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91189883_91210044
ENSMUSG00000064080.13_91210102_91243359_1	chr6	+	2831	13	ISM	ENSMUSG00000064080.13	ENSMUST00000041544.8	4786	18	20665	6163	43	-5506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTACCGCTGCTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	91210101	91243359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91236611_91236753_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296
ENSMUSG00000064080.13_91210336_91246198_1	chr6	+	2906	15	ISM	ENSMUSG00000064080.13	ENSMUST00000041544.8	4786	18	20899	3324	277	-2667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGACAGCCTCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	91210335	91246198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91236611_91236753_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069
ENSMUSG00000064080.13_91210521_91247069_1	chr6	+	2845	16	ISM	ENSMUSG00000064080.13	ENSMUST00000041544.8	4786	18	21084	2453	462	-1796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1780	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCCTTTAGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	91210520	91247069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91236611_91236753_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945
ENSMUSG00000064080.13_91210521_91247070_1	chr6	+	2840	16	NNC	ENSMUSG00000064080.13	novel	3665	17	NA	NA	462	-1795	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1862	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCCTTTAGCCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	91210520	91247070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233867_91233976_91234706_91234809_91236611_91236753_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945
ENSMUSG00000064080.13_91210690_91248626_1	chr6	+	2799	17	ISM	ENSMUSG00000064080.13	ENSMUST00000041544.8	4786	18	21253	896	631	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	950	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTCCCGCCTTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	91210689	91248626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91236611_91236753_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ENSMUSG00000064080.13_91210705_91248659_1	chr6	+	2817	17	ISM	ENSMUSG00000064080.13	ENSMUST00000041544.8	4786	18	21268	863	646	-206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	999	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGACCATCACGAAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	91210704	91248659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91236611_91236753_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ENSMUSG00000064080.13_91210753_91248660_1	chr6	+	2770	17	ISM	ENSMUSG00000064080.13	ENSMUST00000041544.8	4786	18	21316	862	694	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACCATCACGAAGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	91210752	91248660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91236611_91236753_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ENSMUSG00000064080.13_91210767_91248704_1	chr6	+	2800	17	ISM	ENSMUSG00000064080.13	ENSMUST00000041544.8	4786	18	21330	818	708	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1028	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTCAATGCCTACACTG	NA	NA	NA	NA	NA	NA	NA	NA	91210766	91248704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91236611_91236753_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ENSMUSG00000064080.13_91210784_91248713_1	chr6	+	2792	17	ISM	ENSMUSG00000064080.13	ENSMUST00000041544.8	4786	18	21347	809	725	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTACACTGGTGTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	91210783	91248713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91236611_91236753_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ENSMUSG00000064080.13_91210803_91248759_1	chr6	+	2813	17	NNC	ENSMUSG00000064080.13	novel	3665	17	NA	NA	744	-106	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1416	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGACTTTGCCCTAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	91210802	91248759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233867_91233976_91234706_91234809_91236611_91236753_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ENSMUSG00000064080.13_91210912_91248866_1	chr6	+	2817	17	ISM	ENSMUSG00000064080.13	ENSMUST00000041544.8	4786	18	21475	656	853	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCAGGCAATCCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	91210911	91248866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91236611_91236753_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ENSMUSG00000064080.13_91233924_91242756_1	chr6	+	484	5	ISM	ENSMUSG00000064080.13	ENSMUST00000113498.9	4644	17	44487	6765	23865	-6109	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGGGCTCCTACACC	NA	NA	NA	NA	NA	NA	NA	NA	91233923	91242756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_91233976_91234706_91234809_91240320_91240456_91241680_91241819_91242699
ENSMUSG00000064090.15_26421322_26500077_1	chr11	-	1483	11	NNC	ENSMUSG00000064090.15	novel	1642	12	NA	NA	41648	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAGAAAGAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	26500077	26421321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_26421787_26426571_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025
ENSMUSG00000064090.15_26421322_26500077_2	chr11	-	1482	11	NNC	ENSMUSG00000064090.15	novel	1688	12	NA	NA	41648	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAGAAAGAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	26500077	26421321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_26421787_26426566_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485637_26497838_26497927_26499294_26499365_26500025
ENSMUSG00000064090.15_26421322_26541729_1	chr11	-	1625	12	NNC	ENSMUSG00000064090.15	novel	1642	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAGAAAGAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	26541729	26421321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_26421770_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586
ENSMUSG00000064090.15_26421322_26541729_2	chr11	-	1626	12	NNC	ENSMUSG00000064090.15	novel	1642	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3066	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAGAAAGAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	26541729	26421321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_26421787_26426566_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499297_26499365_26500025_26500076_26541586
ENSMUSG00000064090.15_26421322_26541729_3	chr11	-	1628	12	NNC	ENSMUSG00000064090.15	novel	1642	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAGAAAGAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	26541729	26421321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_26421787_26426566_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497839_26497927_26499294_26499365_26500025_26500076_26541586
ENSMUSG00000064090.15_26421322_26541729_4	chr11	-	1623	12	NNC	ENSMUSG00000064090.15	novel	1642	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAGAAAGAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	26541729	26421321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_26421787_26426566_26426701_26433157_26433325_26436965_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586
ENSMUSG00000064090.15_26421322_26541729_5	chr11	-	1629	12	FSM	ENSMUSG00000064090.15	ENST00000340157.9	1688	12	-4	63	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAGAAAGAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	26541729	26421321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_26421787_26426566_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586
ENSMUSG00000064090.15_26421322_26541729_6	chr11	-	1631	12	NNC	ENSMUSG00000064090.15	novel	1642	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAGAAAGAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	26541729	26421321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_26421776_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586
ENSMUSG00000064090.15_26421322_26541729_7	chr11	-	1628	12	NNC	ENSMUSG00000064090.15	novel	1642	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3951	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAGAAAGAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	26541729	26421321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_26421787_26426566_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541587
ENSMUSG00000064090.15_26421322_26541729_8	chr11	-	1627	12	NNC	ENSMUSG00000064090.15	novel	1642	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAGAAAGAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	26541729	26421321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_26421787_26426566_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484212_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586
ENSMUSG00000064090.15_26421322_26541729_9	chr11	-	1628	12	NNC	ENSMUSG00000064090.15	novel	1642	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAGAAAGAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	26541729	26421321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_26421787_26426567_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586
ENSMUSG00000064115.14_66459979_66612254_1	chr16	-	1002	8	ISM	ENSMUSG00000064115.14	ENST00000405615.2	1304	10	137964	0	137964	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAGGCTTCAAGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	66612254	66459978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_66460098_66461266_66461393_66528270_66528391_66544084_66544264_66568492_66568584_66581603_66581775_66609617_66609756_66612196
ENSMUSG00000064115.14_66461356_66679657_1	chr16	-	926	8	ISM	ENSMUSG00000064115.14	ENST00000405615.2	1304	10	70561	1377	70561	-1377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTCATCGGAGGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	66679657	66461355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_66461393_66528270_66528391_66544084_66544264_66568492_66568584_66581603_66581775_66609617_66609756_66612196_66612350_66679620
ENSMUSG00000064115.14_66544085_66750222_1	chr16	-	943	7	ISM	ENSMUSG00000064115.14	ENST00000405615.2	1304	10	-4	84106	-4	-84106	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGATCTTTGGGAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	66750222	66544084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_66544264_66568492_66568584_66581603_66581775_66609617_66609756_66612196_66612350_66679620_66679771_66750161
ENSMUSG00000064120.15_49735470_49761819_1	chr17	+	1732	9	NNC	ENSMUSG00000064120.15	novel	1740	9	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCACACTCTCCAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	49735469	49761819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_49735593_49742127_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49761057
ENSMUSG00000064120.15_49735470_49761819_2	chr17	+	1731	9	NNC	ENSMUSG00000064120.15	novel	1740	9	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCACACTCTCCAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	49735469	49761819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_49735593_49742122_49742291_49746449_49746615_49756127_49756184_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49761057
ENSMUSG00000064138.15_77890972_77973472_1	chr13	+	167	3	ISM	ENSMUSG00000064138.15	ENST00000509739.5	928	8	41	338300	41	-338300	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTGACTGTAATTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	77890971	77973472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_77891006_77907546_77907649_77973441
ENSMUSG00000064138.15_78050850_78100152_1	chr13	+	194	2	ISM	ENSMUSG00000064138.15	ENST00000509739.5	928	8	159919	211620	159919	-211620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCCAGGCTGCTGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	78050849	78100152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_78050995_78100103
ENSMUSG00000064138.15_78050965_78100223_1	chr13	+	150	2	ISM	ENSMUSG00000064138.15	ENST00000509739.5	928	8	160034	211549	160034	-211549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTACATATTCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78050964	78100223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_78050995_78100103
ENSMUSG00000064138.15_78100193_78154561_1	chr13	+	203	3	ISM	ENSMUSG00000064138.15	ENST00000509739.5	928	8	209262	157211	209262	-157211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCTGACTGTCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	78100192	78154561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_78100224_78147704_78147822_78154506
ENSMUSG00000064145.13_108481885_108482601_1	chr9	-	537	2	ISM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	43978	1744	43978	-1744	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTTCACCCTTTAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	108482601	108481884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108482353_108482532
ENSMUSG00000064145.13_108482007_108485157_1	chr9	-	549	4	ISM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	41422	1866	41422	-1866	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGGCTATTAATAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	108485157	108482006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107
ENSMUSG00000064145.13_108485827_108492310_1	chr9	-	514	6	ISM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	34269	5686	34269	-5686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTACTTGTTCTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	108492310	108485826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223
ENSMUSG00000064145.13_108487095_108493983_1	chr9	-	509	5	ISM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	32596	6954	32596	-6954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAGGAGATGATGATGT	NA	NA	NA	NA	NA	NA	NA	NA	108493983	108487094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876
ENSMUSG00000064145.13_108488885_108494634_1	chr9	-	512	5	ISM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	31945	8744	31945	-8744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGCAGACGACTCCGAA	NA	NA	NA	NA	NA	NA	NA	NA	108494634	108488884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570
ENSMUSG00000064145.13_108492224_108521299_1	chr9	-	480	5	ISM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	5280	12083	5280	-12083	internal_fragment	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAACAGCCTTGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	108521299	108492223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224
ENSMUSG00000064145.13_108497275_108526517_1	chr9	-	546	4	ISM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	62	17134	62	-17134	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGATTCTGGACAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	108526517	108497274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108497326_108521224_108521568_108522131_108522194_108526427
ENSMUSG00000064177.9_113694014_113696999_1	chr6	-	531	4	ISM	ENSMUSG00000064177.9	ENST00000430179.5	675	5	1280	0	-158	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCAATCTGAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	113696999	113694013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113694123_113696070_113696185_113696282_113696416_113696824
ENSMUSG00000064177.9_113694014_113696999_2	chr6	-	534	4	ISM	ENSMUSG00000064177.9	ENSMUST00000064993.8	527	5	-158	934	-158	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCAATCTGAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	113696999	113694013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_113694123_113696070_113696188_113696282_113696416_113696824
ENSMUSG00000064177.9_113694014_113698279_1	chr6	-	678	5	FSM	ENSMUSG00000064177.9	ENST00000457360.5	678	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCAATCTGAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	113698279	113694013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_113694123_113696070_113696188_113696282_113696416_113696824_113697085_113698220
ENSMUSG00000064177.9_113694014_113698279_2	chr6	-	285	3	FSM	ENSMUSG00000064177.9	ENST00000449238.6	285	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCAATCTGAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	113698279	113694013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_113694123_113696070_113696188_113698220
ENSMUSG00000064179.14_4507754_4513379_1	chr7	-	661	8	ISM	ENSMUSG00000064179.14	ENSMUST00000166161.8	750	12	3988	0	3988	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCCAGGACATGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	4513379	4507753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315
ENSMUSG00000064179.14_4510382_4515282_1	chr7	-	634	8	ISM	ENSMUSG00000064179.14	ENSMUST00000166161.8	750	12	2085	2628	2085	-2628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGCCACTCCCAACCT	NA	NA	NA	NA	NA	NA	NA	NA	4515282	4510381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513380_4515263
ENSMUSG00000064181.7_116742468_116746259_1	chr10	-	699	3	ISM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	40077	-214	40026	214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTGCAATAAATGAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	116746259	116742467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_116743024_116746029_116746100_116746186
ENSMUSG00000064181.7_116742682_116786285_1	chr10	-	1785	11	NNC	ENSMUSG00000064181.7	novel	1844	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCGTGTGTCTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	116786285	116742681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_116743016_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
ENSMUSG00000064181.7_116742682_116786285_2	chr10	-	1788	11	NNC	ENSMUSG00000064181.7	novel	1844	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCGTGTGTCTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	116786285	116742681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751753_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
ENSMUSG00000064181.7_116742682_116786285_3	chr10	-	1788	11	NNC	ENSMUSG00000064181.7	novel	1844	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCGTGTGTCTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	116786285	116742681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775382_116786164
ENSMUSG00000064181.7_116754733_116775358_1	chr10	-	728	4	ISM	ENSMUSG00000064181.7	ENSMUST00000020375.7	2690	10	10927	13044	10927	-12051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCCATGGGTGGGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	116775358	116754732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_116754871_116755478_116755557_116773301_116773561_116775105
ENSMUSG00000064201.9_101719706_101721611_1	chr15	-	535	3	ISM	ENSMUSG00000064201.9	ENST00000309680.4	1764	10	4929	4	4929	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCCAGAGGTGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	101721611	101719705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101720102_101720188_101720224_101721507
ENSMUSG00000064201.9_101720019_101722903_1	chr15	-	557	5	ISM	ENSMUSG00000064201.9	ENST00000309680.4	1764	10	3637	317	3637	-317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATGGAGGACGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	101722903	101720018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101720102_101720188_101720224_101721507_101721729_101722372_101722499_101722811
ENSMUSG00000064201.9_101720070_101722954_1	chr15	-	557	5	ISM	ENSMUSG00000064201.9	ENST00000309680.4	1764	10	3586	368	3586	-368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTAAGACTGGCTTCGG	NA	NA	NA	NA	NA	NA	NA	NA	101722954	101720069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101720102_101720188_101720224_101721507_101721729_101722372_101722499_101722811
ENSMUSG00000064201.9_101721616_101724383_1	chr15	-	545	5	ISM	ENSMUSG00000064201.9	ENST00000309680.4	1764	10	2157	1914	2157	-1914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTGGCCCGGCTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	101724383	101721615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101721729_101722372_101722499_101722811_101722977_101723453_101723550_101724338
ENSMUSG00000064201.9_101722444_101724912_1	chr15	-	544	5	ISM	ENSMUSG00000064201.9	ENST00000309680.4	1764	10	1628	2742	1628	-2742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGAAATCAGCGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	101724912	101722443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101722499_101722811_101722977_101723453_101723550_101724338_101724400_101724745
ENSMUSG00000064201.9_101722890_101725963_1	chr15	-	534	5	ISM	ENSMUSG00000064201.9	ENST00000309680.4	1764	10	577	3188	577	-3188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCTGAGGTTCAGAATCA	NA	NA	NA	NA	NA	NA	NA	NA	101725963	101722889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101722977_101723453_101723550_101724338_101724400_101724745_101724961_101725888
ENSMUSG00000064201.9_101722947_101726034_1	chr15	-	548	5	ISM	ENSMUSG00000064201.9	ENST00000309680.4	1764	10	506	3245	506	-3245	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACCAATGTCATCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	101726034	101722946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101722977_101723453_101723550_101724338_101724400_101724745_101724961_101725888
ENSMUSG00000064201.9_101724745_101726419_1	chr15	-	540	3	ISM	ENSMUSG00000064201.9	ENST00000309680.4	1764	10	121	5043	121	-5043	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGACGGAGGAGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	101726419	101724744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101724961_101725888_101726164_101726370
ENSMUSG00000064201.9_101724801_101726487_1	chr15	-	552	3	ISM	ENSMUSG00000064201.9	ENST00000309680.4	1764	10	53	5099	53	-5099	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGGAGTCAGAGCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	101726487	101724800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_101724961_101725888_101726164_101726370
ENSMUSG00000064210.8_95688773_95811842_1	chr15	+	818	6	ISM	ENSMUSG00000064210.8	ENSMUST00000071874.8	4927	20	49	60790	0	-58998	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGCGTTTCCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	95688772	95811842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_95688938_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752
ENSMUSG00000064210.8_95792324_95818210_1	chr15	+	766	6	ISM	ENSMUSG00000064210.8	ENSMUST00000227791.2	3149	21	103551	52630	103551	-52630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTGCTTCCTCTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	95792323	95818210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124
ENSMUSG00000064210.8_95811363_95839165_1	chr15	+	782	7	ISM	ENSMUSG00000064210.8	ENSMUST00000227791.2	3149	21	122590	31675	122590	-31675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGAACAGGCCCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	95811362	95839165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090
ENSMUSG00000064210.8_95813834_95846294_1	chr15	+	781	7	ISM	ENSMUSG00000064210.8	ENSMUST00000227791.2	3149	21	125061	24546	125061	-24546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCCTCCATCATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	95813833	95846294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152
ENSMUSG00000064210.8_95818159_95847452_1	chr15	+	796	7	ISM	ENSMUSG00000064210.8	ENSMUST00000227791.2	3149	21	129386	23388	129386	-23388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTCTACATCGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	95818158	95847452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371
ENSMUSG00000064210.8_95853812_95870558_1	chr15	+	789	5	ISM	ENSMUSG00000064210.8	ENSMUST00000227791.2	3149	21	165039	282	165039	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTGCGGCCAAAACTCGA	NA	NA	NA	NA	NA	NA	NA	NA	95853811	95870558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
ENSMUSG00000064215.14_103400518_103406466_1	chr12	+	810	6	FSM	ENSMUSG00000064215.14	ENSMUST00000066701.13	889	6	47	32	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGTGGAAATAAATTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	103400517	103406466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_103400610_103401680_103401833_103402821_103402942_103403934_103403965_103405659_103405822_103406212
ENSMUSG00000064215.14_103400544_103405739_1	chr12	+	583	6	ISM	ENSMUSG00000064215.14	ENSMUST00000085065.12	977	7	26	759	26	-727	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGATGATGTCCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	103400543	103405739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103400610_103401680_103401833_103402821_103402942_103403648_103403784_103403934_103403965_103405659
ENSMUSG00000064215.14_103400551_103406466_1	chr12	+	777	6	FSM	ENSMUSG00000064215.14	ENSMUST00000066701.13	889	6	80	32	33	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGTGGAAATAAATTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	103400550	103406466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_103400610_103401680_103401833_103402821_103402942_103403934_103403965_103405659_103405822_103406212
ENSMUSG00000064215.14_103401766_103406279_1	chr12	+	581	6	ISM	ENSMUSG00000064215.14	ENSMUST00000085065.12	977	7	1248	219	1248	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATGAACATCTGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	103401765	103406279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103401833_103402821_103402942_103403648_103403784_103403934_103403965_103405659_103405822_103406212
ENSMUSG00000064215.14_103402913_103406466_1	chr12	+	612	5	NNC	ENSMUSG00000064215.14	novel	977	7	NA	NA	2395	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGTGGAAATAAATTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	103402912	103406466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_103402942_103403648_103403791_103403939_103403965_103405659_103405822_103406212
ENSMUSG00000064215.14_103403647_103406499_2	chr12	+	616	4	ISM	ENSMUSG00000064215.14	ENSMUST00000085065.12	977	7	3129	-1	3129	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCATTGTTCCCCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	103403646	103406499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103403784_103403934_103403965_103405659_103405822_103406212
ENSMUSG00000064264.15_24206718_24214881_1	chr7	+	733	3	FSM	ENSMUSG00000064264.15	ENSMUST00000071361.13	1182	3	223	226	163	-224	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGAGGACTCCTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	24206717	24214881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_24206862_24209970_24210179_24214500
ENSMUSG00000064264.15_24210065_24215105_1	chr7	+	719	2	ISM	ENSMUSG00000064264.15	ENSMUST00000071361.13	1182	3	3570	2	3510	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCGAGCTGCGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	24210064	24215105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24210179_24214500
ENSMUSG00000064264.15_24210142_24215107_1	chr7	+	644	2	ISM	ENSMUSG00000064264.15	ENSMUST00000071361.13	1182	3	3647	0	3587	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGAGCTGCGTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24210141	24215107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_24210179_24214500
ENSMUSG00000064284.13_85691300_85692539_1	chr15	-	523	2	ISM	ENSMUSG00000064284.13	ENSMUST00000125947.8	706	4	2752	-148	2752	101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGGGAATTCAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	85692539	85691299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_85691740_85692456
ENSMUSG00000064284.13_85691640_85695870_1	chr15	-	503	5	FSM	ENSMUSG00000064284.13	ENSMUST00000071876.13	997	5	27	467	-15	-182	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCACCAGCAAGAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	85695870	85691639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695839
ENSMUSG00000064302.14_118347454_118427451_1	chr1	+	939	9	ISM	ENSMUSG00000064302.14	ENSMUST00000185405.7	4597	39	0	107391	0	-107391	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTGGGTCTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	118347453	118427451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377
ENSMUSG00000064302.14_118347575_118429116_1	chr1	+	903	10	ISM	ENSMUSG00000064302.14	ENSMUST00000185405.7	4597	39	121	105726	121	-105726	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGCTGTAAGTGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	118347574	118429116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031
ENSMUSG00000064302.14_118430669_118449601_1	chr1	+	863	10	ISM	ENSMUSG00000064302.14	ENSMUST00000191823.6	3916	33	20900	85266	20900	-85241	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCTCCACACCCTCCGAC	NA	NA	NA	NA	NA	NA	NA	NA	118430668	118449601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118440434_118440459_118449556
ENSMUSG00000064302.14_118431619_118453098_1	chr1	+	896	11	ISM	ENSMUSG00000064302.14	ENSMUST00000191823.6	3916	33	21850	81769	21850	-81744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGTAACACCATCCTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	118431618	118453098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118440434_118440459_118449556_118449665_118451050_118451078_118453026
ENSMUSG00000064302.14_118436568_118470888_1	chr1	+	866	10	ISM	ENSMUSG00000064302.14	ENSMUST00000191823.6	3916	33	26799	63979	26799	-63954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTGATGCCTCCAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	118436567	118470888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118436713_118437301_118437352_118437935_118438107_118440434_118440459_118449556_118449665_118451050_118451078_118453026_118453186_118466995_118467100_118469404_118469429_118470834
ENSMUSG00000064302.14_118449556_118475759_1	chr1	+	897	8	ISM	ENSMUSG00000064302.14	ENST00000455322.6	5131	39	132371	59314	39787	-59083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACTTGGTCTTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	118449555	118475759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118449665_118451050_118451078_118453026_118453186_118466995_118467100_118469404_118469429_118470831_118471077_118473122_118473187_118475594
ENSMUSG00000064302.14_118453055_118479836_1	chr1	+	905	8	ISM	ENSMUSG00000064302.14	ENST00000455322.6	5131	39	135870	55237	43286	-55006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGGATCATAACATGGACT	NA	NA	NA	NA	NA	NA	NA	NA	118453054	118479836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118453186_118466995_118467100_118469404_118469429_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742
ENSMUSG00000064302.14_118453132_118479886_1	chr1	+	878	8	ISM	ENSMUSG00000064302.14	ENST00000455322.6	5131	39	135947	55187	43363	-54956	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTCACAGAGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	118453131	118479886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118453186_118466995_118467100_118469404_118469429_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742
ENSMUSG00000064302.14_118466993_118487859_1	chr1	+	971	8	ISM	ENSMUSG00000064302.14	ENST00000455322.6	5131	39	149808	47214	57224	-46983	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGCCCACTCATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	118466992	118487859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118467100_118469404_118469429_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715
ENSMUSG00000064302.14_118470830_118488847_1	chr1	+	949	7	ISM	ENSMUSG00000064302.14	ENST00000455322.6	5131	39	153645	46226	61061	-45995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCTCATTCCACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	118470829	118488847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740
ENSMUSG00000064302.14_118471057_118498712_1	chr1	+	856	8	ISM	ENSMUSG00000064302.14	ENST00000455322.6	5131	39	153872	36361	61288	-36130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGATTGTGATATCGTG	NA	NA	NA	NA	NA	NA	NA	NA	118471056	118498712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578
ENSMUSG00000064302.14_118509079_118534962_1	chr1	+	893	5	ISM	ENSMUSG00000064302.14	ENSMUST00000191823.6	3916	33	99310	-95	99310	67	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCACAGCTCTTAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	118509078	118534962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ENSMUSG00000064307.14_101562191_101562790_1	chr7	-	378	2	ISM	ENSMUSG00000064307.14	ENST00000423494.6	635	3	2186	49	2186	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCTGTACCTTGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	101562790	101562190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101562416_101562637
ENSMUSG00000064307.14_101562191_101564974_1	chr7	-	584	3	ISM	ENSMUSG00000064307.14	ENSMUST00000106968.8	766	5	5445	0	2	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCTGTACCTTGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	101564974	101562190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101562420_101562641_101562791_101564768
ENSMUSG00000064307.14_101562191_101583195_1	chr7	-	961	5	NIC	ENSMUSG00000064307.14	novel	766	5	NA	NA	29	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCTGTACCTTGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	101583195	101562190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_101562420_101562641_101562791_101564768_101564975_101569843_101569982_101582956
ENSMUSG00000064307.14_101562191_101583298_1	chr7	-	1064	5	NIC	ENSMUSG00000064307.14	novel	766	5	NA	NA	-74	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCTGTACCTTGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	101583298	101562190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_101562420_101562641_101562791_101564768_101564975_101569843_101569982_101582956
ENSMUSG00000064307.14_101562197_101583363_1	chr7	-	1123	5	NIC	ENSMUSG00000064307.14	novel	821	5	NA	NA	57	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAAGTCCCCTGTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	101583363	101562196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_101562420_101562641_101562791_101564768_101564975_101569843_101569982_101582956
ENSMUSG00000064307.14_101562365_101570751_1	chr7	-	589	5	ISM	ENSMUSG00000064307.14	ENSMUST00000078448.11	873	6	12313	168	-319	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGGCCGATCGCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	101570751	101562364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101562420_101562641_101562791_101564768_101564975_101569843_101569982_101570710
ENSMUSG00000064307.14_101562777_101583009_1	chr7	-	634	6	ISM	ENSMUSG00000064307.14	ENST00000647530.1	1200	7	215	573	0	-396	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAACCTAAGTGTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	101583009	101562776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_101562791_101564768_101564975_101569843_101569982_101570710_101570794_101577803_101577915_101582927
ENSMUSG00000064373.14_3300403_3309433_1	chr15	+	1529	5	FSM	ENSMUSG00000064373.14	ENSMUST00000159216.10	2085	5	0	556	0	-184	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTCTTTCTTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	3300402	3309433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_3300535_3304142_3304359_3305048_3305262_3306638_3306757_3308583
ENSMUSG00000064373.14_3300481_3309486_1	chr15	+	1504	5	FSM	ENSMUSG00000064373.14	ENSMUST00000159216.10	2085	5	78	503	78	-131	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATAAACTATGACCTAG	NA	NA	NA	NA	NA	NA	NA	NA	3300480	3309486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_3300535_3304142_3304359_3305048_3305262_3306638_3306757_3308583
ENSMUSG00000064373.14_3300481_3309536_1	chr15	+	1554	5	FSM	ENSMUSG00000064373.14	ENSMUST00000159216.10	2085	5	78	453	78	-81	multi-exon	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACGGAGAAAGAACAACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	3300480	3309536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_3300535_3304142_3304359_3305048_3305262_3306638_3306757_3308583
ENSMUSG00000064373.14_3304143_3309617_1	chr15	+	1581	4	ISM	ENSMUSG00000064373.14	ENSMUST00000159216.10	2085	5	3740	372	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTCTTACATTCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	3304142	3309617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_3304359_3305048_3305262_3306638_3306757_3308583
ENSMUSG00000064373.14_3304216_3308911_1	chr15	+	475	2	FSM	ENSMUSG00000064373.14	ENST00000507920.5	720	2	73	172	73	-172	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTCTAAGGAGTCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	3304215	3308911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_3304363_3308583
ENSMUSG00000064373.14_3304278_3308979_1	chr15	+	481	2	FSM	ENSMUSG00000064373.14	ENST00000507920.5	720	2	135	104	135	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAGGGTCTGCAATTGC	NA	NA	NA	NA	NA	NA	NA	NA	3304277	3308979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_3304363_3308583
ENSMUSG00000064373.14_3304333_3309026_1	chr15	+	473	2	FSM	ENSMUSG00000064373.14	ENST00000507920.5	720	2	190	57	190	-57	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGTAGCTGACAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	3304332	3309026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_3304363_3308583
ENSMUSG00000064373.14_3305089_3309811_1	chr15	+	1519	3	ISM	ENSMUSG00000064373.14	ENST00000506577.5	1587	4	948	-194	946	-178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTAATCTGCGTACTGC	NA	NA	NA	NA	NA	NA	NA	NA	3305088	3309811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_3305262_3306638_3306757_3308583
ENSMUSG00000064373.14_3305157_3309990_1	chr15	+	1630	3	ISM	ENSMUSG00000064373.14	ENST00000506577.5	1587	4	1016	-373	1014	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTCTTTATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	3305156	3309990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_3305262_3306638_3306757_3308583
ENSMUSG00000064373.14_3305215_3309990_1	chr15	+	1572	3	ISM	ENSMUSG00000064373.14	ENST00000506577.5	1587	4	1074	-373	1072	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTCTTTATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	3305214	3309990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_3305262_3306638_3306757_3308583
ENSMUSG00000065954.12_25647644_25651314_1	chr8	-	2297	2	ISM	ENSMUSG00000099142.3_ENSMUSG00000065954.12	ENST00000520611.1	1211	10	20610	-1971	-2065	1497	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGCTTAATGCAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	25651314	25647643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_25649837_25651210
ENSMUSG00000065954.12_25647745_25654489_1	chr8	-	2298	3	ISM	ENSMUSG00000099142.3_ENSMUSG00000065954.12	ENST00000520611.1	1211	10	17435	-1870	-5240	1396	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAGAAGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	25654489	25647744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_25649837_25651210_25651332_25654404
ENSMUSG00000065954.12_25647846_25655546_1	chr8	-	2289	4	ISM	ENSMUSG00000099142.3_ENSMUSG00000065954.12	ENST00000520611.1	1211	10	16378	-1769	-6297	1295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTCAAGCTAGAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	25655546	25647845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476
ENSMUSG00000065954.12_25647906_25655606_1	chr8	-	2289	4	ISM	ENSMUSG00000099142.3_ENSMUSG00000065954.12	ENST00000520611.1	1211	10	16318	-1709	-6357	1235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTTAGCAGTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	25655606	25647905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476
ENSMUSG00000065954.12_25648061_25657597_1	chr8	-	2276	6	ISM	ENSMUSG00000099142.3_ENSMUSG00000065954.12	ENST00000520611.1	1211	10	14327	-1554	-8348	1080	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTGCCTTAATC	NA	NA	NA	NA	NA	NA	NA	NA	25657597	25648060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530
ENSMUSG00000065954.12_25648316_25665224_1	chr8	-	2277	9	ISM	ENSMUSG00000099142.3_ENSMUSG00000065954.12	ENST00000520973.5	2459	13	25574	-1299	6700	825	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGAGTCCTCTGGCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	25665224	25648315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157
ENSMUSG00000065954.12_25648510_25691218_1	chr8	-	2282	11	FSM	ENSMUSG00000065954.12	ENSMUST00000084512.11	6471	11	247	3942	247	1105	multi-exon	TRUE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACCAGTGGGATGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	25691218	25648509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25691137
ENSMUSG00000065954.12_25648590_25691311_1	chr8	-	2295	11	FSM	ENSMUSG00000065954.12	ENSMUST00000084512.11	6471	11	154	4022	154	1025	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCCTTGGATGCATGCG	NA	NA	NA	NA	NA	NA	NA	NA	25691311	25648589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25691137
ENSMUSG00000065954.12_25648712_25691419_1	chr8	-	2281	11	FSM	ENSMUSG00000065954.12	ENSMUST00000084512.11	6471	11	46	4144	46	903	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGCTTTCATGGCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	25691419	25648711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25691137
ENSMUSG00000065954.12_25649615_25690732_1	chr8	-	2393	13	FSM	ENSMUSG00000065954.12	ENST00000520973.5	2459	13	66	0	66	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGCTGCGCTGCCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	25690732	25649614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25690659
ENSMUSG00000065954.12_25649615_25690793_1	chr8	-	2453	13	NNC	ENSMUSG00000065954.12	novel	2459	13	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGCTGCGCTGCCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	25690793	25649614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25690660
ENSMUSG00000065954.12_25649752_25665242_1	chr8	-	949	9	ISM	ENSMUSG00000065954.12	ENST00000520611.1	1211	10	6682	137	6682	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGATCCGAGTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	25665242	25649751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665067
ENSMUSG00000065954.12_25649782_25671854_1	chr8	-	974	10	FSM	ENSMUSG00000065954.12	ENST00000520611.1	1211	10	70	167	70	-167	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGACCGACTGAGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	25671854	25649781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665067_25665282_25671838
ENSMUSG00000065979.13_11622974_11646345_1	chr16	-	781	2	ISM	ENSMUSG00000065979.13	ENSMUST00000121750.2	2614	4	80941	1383	80941	-1383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGCAGCTTTTAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	11646345	11622973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_11623448_11646038
ENSMUSG00000065979.13_11623147_11705506_1	chr16	-	789	3	ISM	ENSMUSG00000065979.13	ENSMUST00000121750.2	2614	4	21780	1556	21780	-1556	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTCTGAGCAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	11705506	11623146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_11623448_11646038_11646462_11705441
ENSMUSG00000065979.13_11623266_11705618_1	chr16	-	782	3	ISM	ENSMUSG00000065979.13	ENSMUST00000121750.2	2614	4	21668	1675	21668	-1675	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTGGGGTCGAGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	11705618	11623265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_11623448_11646038_11646462_11705441
ENSMUSG00000065979.13_11623379_11727260_1	chr16	-	842	4	FSM	ENSMUSG00000065979.13	ENSMUST00000096272.11	2663	4	27	1794	26	-1788	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCATCTGCTATCGGG	NA	NA	NA	NA	NA	NA	NA	NA	11727260	11623378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_11623448_11646038_11646462_11705441_11705661_11727129
ENSMUSG00000065990.13_155917177_155917533_1	chr4	+	264	2	ISM	ENSMUSG00000065990.13	ENSMUST00000105592.8	1029	3	1061	-15	1051	15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTTTCTTTGGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	155917176	155917533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_155917255_155917347
ENSMUSG00000066026.15_144619707_144650601_1	chr4	+	1202	5	ISM	ENSMUSG00000066026.15	ENSMUST00000171001.8	1349	7	310	3614	60	-3611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGGACTGGGGAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	144619706	144650601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_144620280_144645220_144645365_144645954_144646075_144646410_144646650_144650475
ENSMUSG00000066026.15_144619940_144653933_1	chr4	+	1198	6	FSM	ENSMUSG00000066026.15	ENSMUST00000154208.8	2337	6	293	846	293	-279	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTCAACTCCAGGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	144619939	144653933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_144620280_144645220_144645365_144645954_144646075_144646410_144646650_144650475_144650602_144653704
ENSMUSG00000066026.15_144645219_144654209_1	chr4	+	1136	5	ISM	ENSMUSG00000066026.15	ENSMUST00000171001.8	1349	7	25822	6	25572	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCCTTCGTTCACGT	NA	NA	NA	NA	NA	NA	NA	NA	144645218	144654209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_144645365_144645954_144646075_144646410_144646650_144650475_144650602_144653704
ENSMUSG00000066026.15_144645977_144654417_1	chr4	+	1176	4	ISM	ENSMUSG00000066026.15	ENSMUST00000154208.8	2337	6	26330	362	26330	202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAAGAGTTGACCGCATC	NA	NA	NA	NA	NA	NA	NA	NA	144645976	144654417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_144646075_144646410_144646650_144650475_144650602_144653704
ENSMUSG00000066026.15_144646464_144654551_1	chr4	+	1159	3	ISM	ENSMUSG00000066026.15	ENSMUST00000154208.8	2337	6	26817	228	26817	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCTGTGGAAGAAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	144646463	144654551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_144646650_144650475_144650602_144653704
ENSMUSG00000066026.15_144650472_144654780_1	chr4	+	1206	2	ISM	ENSMUSG00000066026.15	ENSMUST00000154208.8	2337	6	30825	-1	30825	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCAGTGTGACCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	144650471	144654780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_144650602_144653704
ENSMUSG00000066037.15_136038339_136059919_1	chr4	+	927	7	ISM	ENSMUSG00000066037.15	ENSMUST00000131671.8	2543	10	86	8073	3	-7538	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAATGTAGCTGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	136038338	136059919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708
ENSMUSG00000066037.15_136043671_136063675_1	chr4	+	928	7	ISM	ENSMUSG00000066037.15	ENSMUST00000105850.8	2683	11	5392	4317	5335	-3782	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTTTGGAAAACTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	136043670	136063675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608
ENSMUSG00000066037.15_136046703_136066608_1	chr4	+	907	6	ISM	ENSMUSG00000066037.15	ENSMUST00000105850.8	2683	11	8424	1384	8367	-849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTTATATTTTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	136046702	136066608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486
ENSMUSG00000066037.15_136054557_136066839_1	chr4	+	891	6	ISM	ENSMUSG00000066037.15	ENST00000606561.5	1832	9	16242	618	16221	-618	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTACTATGATGATTAC	NA	NA	NA	NA	NA	NA	NA	NA	136054556	136066839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUSG00000066037.15_136054686_136066925_1	chr4	+	848	6	ISM	ENSMUSG00000066037.15	ENST00000606561.5	1832	9	16371	532	16350	-532	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGCAGTAAGAGGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	136054685	136066925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUSG00000066037.15_136059739_136067129_1	chr4	+	848	4	ISM	ENSMUSG00000066037.15	ENST00000606561.5	1832	9	21424	328	21403	-328	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGGGGGCAATGTAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	136059738	136067129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUSG00000066037.15_136059780_136067192_1	chr4	+	870	4	ISM	ENSMUSG00000066037.15	ENST00000606561.5	1832	9	21465	265	21444	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTCAGACCAACAACCAACA	NA	NA	NA	NA	NA	NA	NA	NA	136059779	136067192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUSG00000066037.15_136063636_136067389_1	chr4	+	905	3	ISM	ENSMUSG00000066037.15	ENST00000606561.5	1832	9	25321	68	25300	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACATTCTTCAAACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	136063635	136067389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_136063759_136066486_136066609_136066729
ENSMUSG00000066037.15_136063721_136067425_1	chr4	+	856	3	ISM	ENSMUSG00000066037.15	ENST00000606561.5	1832	9	25406	32	25385	-32	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAAGTAGCAGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	136063720	136067425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_136063759_136066486_136066609_136066729
ENSMUSG00000066037.15_136066552_136067568_1	chr4	+	896	2	ISM	ENSMUSG00000066037.15	ENST00000606561.5	1832	9	28237	-111	28216	111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTTATCGTTCCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	136066551	136067568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_136066609_136066729
ENSMUSG00000066042.5_132186513_132190319_1	chr4	-	1056	2	ISM	ENSMUSG00000066042.5	ENSMUST00000102567.4	1675	3	913	471	913	-471	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGGAATAAATTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	132190319	132186512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132187425_132190175
ENSMUSG00000066149.12_62312871_62326862_1	chr4	-	751	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	17	51	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCTTAACTGATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	62326862	62312870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
ENSMUSG00000066150.13_62278964_62306986_1	chr4	+	698	5	FSM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	0	3020	0	-3020	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTGGAAGAAGGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	62278963	62306986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834
ENSMUSG00000066150.13_62303738_62307098_1	chr4	+	684	4	ISM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	24774	2908	0	-2908	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCCTTTCCAATCATCC	NA	NA	NA	NA	NA	NA	NA	NA	62303737	62307098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_62303916_62304327_62304401_62306103_62306273_62306834
ENSMUSG00000066150.13_62303842_62307172_1	chr4	+	654	4	ISM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	24878	2834	104	-2834	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGAATAGTGGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	62303841	62307172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_62303916_62304327_62304401_62306103_62306273_62306834
ENSMUSG00000066150.13_62304355_62307275_1	chr4	+	656	3	ISM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	25391	2731	617	-2731	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTCCTAGTTAAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	62304354	62307275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_62304401_62306103_62306273_62306834
ENSMUSG00000066150.13_62306204_62307419_1	chr4	+	654	2	ISM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	27240	2587	2466	-2587	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGATAAAAAAGGATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	62306203	62307419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_62306273_62306834
ENSMUSG00000066151.13_62232573_62252451_1	chr4	-	1091	11	ISM	ENSMUSG00000066151.13	ENSMUST00000084528.10	3329	21	26334	3064	26256	-3064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGTTGCAGCTGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	62252451	62232572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357
ENSMUSG00000066196.12_43651335_43652399_1	chr4	-	581	5	ISM	ENSMUSG00000066196.12	ENST00000484764.5	1194	6	724	10	724	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTAATTCATTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	43652399	43651334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43651655_43651746_43651792_43651927_43652043_43652116_43652163_43652344
ENSMUSG00000066196.12_43651461_43652436_1	chr4	-	492	5	ISM	ENSMUSG00000066196.12	ENST00000484764.5	1194	6	687	136	687	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATCGAGGAGAGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	43652436	43651460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43651655_43651746_43651792_43651927_43652043_43652116_43652163_43652344
ENSMUSG00000066196.12_43651502_43652498_1	chr4	-	513	5	ISM	ENSMUSG00000066196.12	ENST00000484764.5	1194	6	625	177	625	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGCAGGGGTGTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	43652498	43651501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43651655_43651746_43651792_43651927_43652043_43652116_43652163_43652344
ENSMUSG00000066196.12_43651605_43652705_1	chr4	-	496	6	FSM	ENSMUSG00000066196.12	ENST00000484764.5	1194	6	418	280	418	71	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCGACGCCCGTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	43652705	43651604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_43651655_43651746_43651792_43651927_43652043_43652116_43652163_43652344_43652520_43652640
ENSMUSG00000066196.12_43651636_43652775_1	chr4	-	535	6	FSM	ENSMUSG00000066196.12	ENST00000484764.5	1194	6	348	311	348	40	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGACACACCATTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	43652775	43651635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_43651655_43651746_43651792_43651927_43652043_43652116_43652163_43652344_43652520_43652640
ENSMUSG00000066196.12_43652022_43652899_1	chr4	-	501	4	ISM	ENSMUSG00000066196.12	ENST00000484764.5	1194	6	224	697	224	-346	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACCTGCAAGGAAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	43652899	43652021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43652043_43652116_43652163_43652344_43652520_43652640
ENSMUSG00000066196.12_43652452_43653056_1	chr4	-	484	2	ISM	ENSMUSG00000066196.12	ENST00000484764.5	1194	6	67	1127	67	-776	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACACCAGGGTCTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	43653056	43652451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43652520_43652640
ENSMUSG00000066232.5_109642028_109647370_1	chr7	+	711	7	ISM	ENSMUSG00000066232.5	ENST00000451446.1	1757	15	762	6951	762	-6951	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAGGAAGGAAGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	109642027	109647370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335
ENSMUSG00000066232.5_109645372_109648250_1	chr7	+	709	6	ISM	ENSMUSG00000066232.5	ENST00000451446.1	1757	15	4106	6071	4106	-6071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGATGGCTTTGATTAC	NA	NA	NA	NA	NA	NA	NA	NA	109645371	109648250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151
ENSMUSG00000066232.5_109645972_109650043_1	chr7	+	717	7	ISM	ENSMUSG00000066232.5	ENST00000451446.1	1757	15	4706	4278	4706	-4278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTATTCTGCAGTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	109645971	109650043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986
ENSMUSG00000066232.5_109646239_109651987_1	chr7	+	702	7	ISM	ENSMUSG00000066232.5	ENST00000451446.1	1757	15	4973	2334	4973	-2334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGTGAGGATGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	109646238	109651987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109651917
ENSMUSG00000066232.5_109646296_109652053_1	chr7	+	711	7	ISM	ENSMUSG00000066232.5	ENST00000451446.1	1757	15	5030	2268	5030	-2268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCCACAATCATCGATG	NA	NA	NA	NA	NA	NA	NA	NA	109646295	109652053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109651917
ENSMUSG00000066232.5_109647335_109652175_1	chr7	+	775	6	ISM	ENSMUSG00000066232.5	ENST00000451446.1	1757	15	6069	2146	6069	-2146	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGTCCCTTAGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	109647334	109652175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109651917
ENSMUSG00000066232.5_109648008_109653274_1	chr7	+	706	6	ISM	ENSMUSG00000066232.5	ENST00000451446.1	1757	15	6742	1047	6742	-1047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTACAGGACATAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	109648007	109653274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109651917_109652176_109653206
ENSMUSG00000066232.5_109648203_109654278_1	chr7	+	699	6	ISM	ENSMUSG00000066232.5	ENST00000451446.1	1757	15	6937	43	6937	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTTTCAATTTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	109648202	109654278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_109648278_109648802_109648901_109649986_109650083_109651917_109652176_109653206_109653324_109654223
ENSMUSG00000066233.7_122850483_122851972_1	chr9	+	369	3	FSM	ENSMUSG00000066233.7	ENSMUST00000084733.7	1041	3	92	580	43	-580	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGGGCTCACCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	122850482	122851972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_122850636_122851230_122851378_122851903
ENSMUSG00000066233.7_122850613_122852108_1	chr9	+	375	3	FSM	ENSMUSG00000066233.7	ENSMUST00000084733.7	1041	3	222	444	173	-444	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTTCCAGGGCGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	122850612	122852108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_122850636_122851230_122851378_122851903
ENSMUSG00000066233.7_122851317_122852226_1	chr9	+	384	2	ISM	ENSMUSG00000066233.7	ENSMUST00000084733.7	1041	3	926	326	877	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGGGAAGCTAACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	122851316	122852226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_122851378_122851903
ENSMUSG00000066278.7_124143980_124145706_1	chr5	-	857	2	ISM	ENSMUSG00000066278.7	ENSMUST00000040967.9	2522	4	24627	1276	24627	-1276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATGATTAATTATATGTT	NA	NA	NA	NA	NA	NA	NA	NA	124145706	124143979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_124144802_124145671
ENSMUSG00000066278.7_124144199_124170211_1	chr5	-	905	4	FSM	ENSMUSG00000066278.7	ENSMUST00000040967.9	2522	4	122	1495	122	-1495	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGCCCACCTGATTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	124170211	124144198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_124144802_124145671_124145755_124148750_124148923_124170164
ENSMUSG00000066278.7_124144346_124170321_1	chr5	-	868	4	FSM	ENSMUSG00000066278.7	ENSMUST00000040967.9	2522	4	12	1642	12	-1642	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCCCACACCAGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	124170321	124144345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_124144802_124145671_124145755_124148750_124148923_124170164
ENSMUSG00000066357.7_108449591_108450971_1	chr9	-	1220	3	ISM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	4967	81	4967	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGACAGACGTTGAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	108450971	108449590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108450613_108450687_108450807_108450892
ENSMUSG00000066357.7_108449830_108451319_1	chr9	-	1135	5	ISM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	4619	320	4619	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTGGAACACCTCACG	NA	NA	NA	NA	NA	NA	NA	NA	108451319	108449829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299
ENSMUSG00000066357.7_108449882_108451403_1	chr9	-	1167	5	ISM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	4535	372	4535	-372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTGGGCCCTTAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	108451403	108449881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299
ENSMUSG00000066357.7_108449967_108451471_1	chr9	-	1150	5	ISM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	4467	457	4467	-457	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTGTATTTATTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	108451471	108449966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299
ENSMUSG00000066357.7_108450724_108452165_1	chr9	-	1162	4	ISM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	3773	1214	3773	-1214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGGAGCTTCCAGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	108452165	108450723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108450807_108450892_108451010_108451103_108451200_108451299
ENSMUSG00000066357.7_108450774_108452225_1	chr9	-	1172	4	ISM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	3713	1264	3713	-1264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTAGCCTTCTGGGATC	NA	NA	NA	NA	NA	NA	NA	NA	108452225	108450773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108450807_108450892_108451010_108451103_108451200_108451299
ENSMUSG00000066357.7_108450995_108452341_1	chr9	-	1153	3	ISM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	3597	1485	3597	-1485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCTGGGCGAATTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	108452341	108450994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108451010_108451103_108451200_108451299
ENSMUSG00000066357.7_108452707_108455800_1	chr9	-	1183	2	ISM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	138	3197	138	-3197	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGCCTGCTAGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	108455800	108452706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108453782_108455692
ENSMUSG00000066357.7_108452790_108455938_1	chr9	-	1238	2	ISM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	0	3280	0	-3280	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGATGTGGGGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	108455938	108452789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108453782_108455692
ENSMUSG00000066392.13_89780091_90299259_1	chr12	+	2334	8	FSM	ENSMUSG00000066392.13	ENST00000676811.1	2466	8	53	79	-50	75	multi-exon	FALSE	canonical	NA	NA	NA	NA	1964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAACTTGTTGAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	89780090	90299259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_89780411_89943114_89943297_90135693_90135866_90165920_90166011_90171284_90171593_90250345_90250425_90289233_90289416_90298258
ENSMUSG00000066392.13_89780091_90299259_2	chr12	+	2328	8	NNC	ENSMUSG00000066392.13	novel	2466	8	NA	NA	-50	75	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1964	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAACTTGTTGAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	89780090	90299259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_89780411_89943114_89943297_90135693_90135866_90165920_90166011_90171284_90171593_90250345_90250425_90289233_90289410_90298258
ENSMUSG00000066392.13_89780179_90299338_1	chr12	+	2325	8	FSM	ENSMUSG00000066392.13	ENST00000676811.1	2466	8	141	0	38	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGATGGTGTATCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	89780178	90299338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_89780411_89943114_89943297_90135693_90135866_90165920_90166011_90171284_90171593_90250345_90250425_90289233_90289416_90298258
ENSMUSG00000066392.13_89780179_90299338_2	chr12	+	2858	8	FSM	ENSMUSG00000066392.13	ENST00000555387.1	3225	8	38	329	38	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGATGGTGTATCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	89780178	90299338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_89780411_89943114_89943297_90135693_90135866_90165920_90166011_90171284_90171593_90250345_90250434_90288709_90289416_90298258
ENSMUSG00000066392.13_89780305_90299533_1	chr12	+	2924	8	NNC	ENSMUSG00000066392.13	novel	3225	8	NA	NA	164	-119	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTACTTGTTCCATAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	89780304	90299533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_89780411_89943114_89943297_90135693_90135866_90165920_90166011_90171284_90171593_90250345_90250434_90288709_90289416_90298261
ENSMUSG00000066392.13_89943114_90299713_1	chr12	+	3002	7	ISM	ENSMUSG00000066392.13	ENST00000555387.1	3225	8	162973	-46	162973	11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGAAATACCCTTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	89943113	90299713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_89943297_90135693_90135866_90165920_90166011_90171284_90171593_90250345_90250434_90288709_90289416_90298258
ENSMUSG00000066406.17_75293067_75334921_1	chr7	+	790	5	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	75	65814	75	-65814	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATGAGCTCTGCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	75293066	75334921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75293213_75313159_75313236_75316259_75316397_75326853_75327228_75334864
ENSMUSG00000066406.17_75313158_75335057_1	chr7	+	782	4	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	20166	65678	20166	-65678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGGCTAAAATAAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	75313157	75335057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75313236_75316259_75316397_75326853_75327228_75334864
ENSMUSG00000066406.17_75316316_75337037_1	chr7	+	725	4	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	23324	63698	23324	-63698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATGACAATCAGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	75316315	75337037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75316397_75326853_75327228_75334864_75335058_75336960
ENSMUSG00000066406.17_75326933_75347100_1	chr7	+	691	5	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	33941	53635	33941	-53635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGAAGAAAAGAGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	75326932	75347100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75327228_75334864_75335058_75336960_75337070_75345371_75345415_75347049
ENSMUSG00000066406.17_75327062_75354170_1	chr7	+	702	6	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	34070	46565	34070	-46565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGATAAAAAGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	75327061	75354170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75327228_75334864_75335058_75336960_75337070_75345371_75345415_75347049_75347183_75354112
ENSMUSG00000066406.17_75327087_75354287_1	chr7	+	794	6	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	34095	46448	34095	-46448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGACATGCTCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	75327086	75354287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75327228_75334864_75335058_75336960_75337070_75345371_75345415_75347049_75347183_75354112
ENSMUSG00000066406.17_75334863_75369943_1	chr7	+	790	7	ISM	ENSMUSG00000066406.17	ENST00000361243.6	8776	37	229436	30792	41871	-30792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGCTTCAGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	75334862	75369943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75335058_75336960_75337070_75345371_75345415_75347049_75347183_75354112_75354288_75367517_75367586_75369876
ENSMUSG00000066406.17_75335005_75373584_1	chr7	+	700	8	ISM	ENSMUSG00000066406.17	ENST00000361243.6	8776	37	229578	27151	42013	-27151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCGGCACCAATGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	75335004	75373584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75335058_75336960_75337070_75345371_75345415_75347049_75347183_75354112_75354288_75367517_75367586_75369876_75369944_75373532
ENSMUSG00000066406.17_75337034_75375099_1	chr7	+	710	8	ISM	ENSMUSG00000066406.17	ENST00000361243.6	8776	37	231607	25636	44042	-25636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGACTCATTGAATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	75337033	75375099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75337070_75345371_75345415_75347049_75347183_75354112_75354288_75367517_75367586_75369876_75369944_75373532_75373669_75375047
ENSMUSG00000066406.17_75347053_75375739_1	chr7	+	713	7	ISM	ENSMUSG00000066406.17	ENST00000361243.6	8776	37	241626	24996	54061	-24996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCTGATGGGAGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	75347052	75375739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75347183_75354112_75354288_75367517_75367586_75369876_75369944_75373532_75373669_75375047_75375161_75375715
ENSMUSG00000066406.17_75347108_75375795_1	chr7	+	714	7	ISM	ENSMUSG00000066406.17	ENST00000361243.6	8776	37	241681	24940	54116	-24940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCGGACAGTGGACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	75347107	75375795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75347183_75354112_75354288_75367517_75367586_75369876_75369944_75373532_75373669_75375047_75375161_75375715
ENSMUSG00000066406.17_75354181_75376775_1	chr7	+	702	7	ISM	ENSMUSG00000066406.17	ENST00000361243.6	8776	37	248754	23960	61189	-23960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCGGGGCATGATGACAG	NA	NA	NA	NA	NA	NA	NA	NA	75354180	75376775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75354288_75367517_75367586_75369876_75369944_75373532_75373669_75375047_75375161_75375715_75375869_75376717
ENSMUSG00000066406.17_75354233_75376830_1	chr7	+	705	7	ISM	ENSMUSG00000066406.17	ENST00000361243.6	8776	37	248806	23905	61241	-23905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCTGCTTGGATGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	75354232	75376830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75354288_75367517_75367586_75369876_75369944_75373532_75373669_75375047_75375161_75375715_75375869_75376717
ENSMUSG00000066406.17_75367515_75376968_1	chr7	+	791	6	ISM	ENSMUSG00000066406.17	ENST00000361243.6	8776	37	262088	23767	74523	-23767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCAGCCGGAAGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	75367514	75376968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75367586_75369876_75369944_75373532_75373669_75375047_75375161_75375715_75375869_75376717
ENSMUSG00000066406.17_75373533_75378669_1	chr7	+	779	5	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	80541	22066	80541	-22066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGACCTGAAACGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	75373532	75378669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75373669_75375047_75375161_75375715_75375869_75376717_75376969_75378543
ENSMUSG00000066406.17_75373645_75378819_1	chr7	+	705	6	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	80653	21916	80653	-21916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGTGCATTTTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	75373644	75378819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75373669_75375047_75375161_75375715_75375869_75376717_75376969_75378543_75378670_75378781
ENSMUSG00000066406.17_75375715_75380146_1	chr7	+	685	5	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	82723	20589	82723	-20589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCTGGTGAAGGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	75375714	75380146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75375869_75376717_75376969_75378543_75378670_75378781_75378900_75380110
ENSMUSG00000066406.17_75375766_75380204_1	chr7	+	692	5	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	82774	20531	82774	-20531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGCGTCTCGGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	75375765	75380204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75375869_75376717_75376969_75378543_75378670_75378781_75378900_75380110
ENSMUSG00000066406.17_75375813_75380264_1	chr7	+	705	5	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	82821	20471	82821	-20471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGGCAGATGTTCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	75375812	75380264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75375869_75376717_75376969_75378543_75378670_75378781_75378900_75380110
ENSMUSG00000066406.17_75376807_75386066_1	chr7	+	765	6	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	83815	14669	83815	-14669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTGTAAGAGAAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	75376806	75386066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75376969_75378543_75378670_75378781_75378900_75380110_75380360_75385460_75385538_75386033
ENSMUSG00000066406.17_75376908_75386093_1	chr7	+	691	6	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	83916	14642	83916	-14642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAGGCCTGTTCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	75376907	75386093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75376969_75378543_75378670_75378781_75378900_75380110_75380360_75385460_75385538_75386033
ENSMUSG00000066406.17_75378637_75386402_1	chr7	+	706	6	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	85645	14333	85645	-14333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATTGTTGGATACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	75378636	75386402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75378670_75378781_75378900_75380110_75380360_75385460_75385538_75386033_75386216_75386355
ENSMUSG00000066406.17_75378836_75389169_1	chr7	+	711	6	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	85844	11566	85844	-11566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCCGGGACATGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	75378835	75389169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75378900_75380110_75380360_75385460_75385538_75386033_75386216_75386355_75386439_75389113
ENSMUSG00000066406.17_75378877_75389236_1	chr7	+	737	6	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	85885	11499	85885	-11499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTCTTCCGCTCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	75378876	75389236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75378900_75380110_75380360_75385460_75385538_75386033_75386216_75386355_75386439_75389113
ENSMUSG00000066406.17_75380231_75392423_1	chr7	+	706	6	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	87239	8312	87239	-8312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTTGGACAGTCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	75380230	75392423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75380360_75385460_75385538_75386033_75386216_75386355_75386439_75389113_75389309_75392383
ENSMUSG00000066406.17_75380286_75392482_1	chr7	+	710	6	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	87294	8253	87294	-8253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCCCCGGAGAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	75380285	75392482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75380360_75385460_75385538_75386033_75386216_75386355_75386439_75389113_75389309_75392383
ENSMUSG00000066406.17_75385459_75393284_1	chr7	+	772	6	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	92467	7451	92467	-7451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGCTCTCCTAGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	75385458	75393284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75385538_75386033_75386216_75386355_75386439_75389113_75389309_75392383_75392546_75393213
ENSMUSG00000066406.17_75386033_75396558_1	chr7	+	790	7	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	93041	4177	93041	-4177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATGTGCCATCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	75386032	75396558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75386216_75386355_75386439_75389113_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396507
ENSMUSG00000066406.17_75386151_75397383_1	chr7	+	730	8	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	93159	3352	93159	-3352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCCTCACAAGGAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	75386150	75397383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75386216_75386355_75386439_75389113_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396507_75396559_75397325
ENSMUSG00000066406.17_75389226_75397613_1	chr7	+	700	6	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	96234	3122	96234	-3122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGAGGGACCGCGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	75389225	75397613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396507_75396559_75397325
ENSMUSG00000066406.17_75392382_75397775_1	chr7	+	781	5	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	99390	2960	99390	-2960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCCAAGAACCTGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	75392381	75397775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75392546_75393213_75393285_75393712_75393758_75396507_75396559_75397325
ENSMUSG00000066406.17_75392511_75398977_1	chr7	+	702	6	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	99519	1758	99519	-1758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGATGAGTTCTCCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	75392510	75398977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75392546_75393213_75393285_75393712_75393758_75396507_75396559_75397325_75397776_75398927
ENSMUSG00000066406.17_75397323_75399258_1	chr7	+	784	2	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	104331	1477	104331	-1477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTGTCAGAGTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	75397322	75399258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75397776_75398927
ENSMUSG00000066406.17_75397499_75400442_1	chr7	+	729	3	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	104507	293	104507	-293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACACTGGACGCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	75397498	75400442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75397776_75398927_75399259_75400321
ENSMUSG00000066406.17_75397553_75400502_1	chr7	+	735	3	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	104561	233	104561	-233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAAGAAGGAGCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	75397552	75400502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75397776_75398927_75399259_75400321
ENSMUSG00000066406.17_75397681_75400589_1	chr7	+	694	3	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	104689	146	104689	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCCTGGCCTTACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	75397680	75400589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75397776_75398927_75399259_75400321
ENSMUSG00000066406.17_75398925_75400735_1	chr7	+	748	2	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	105933	0	105933	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGACTCAAGGAGCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	75398924	75400735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_75399259_75400321
ENSMUSG00000066441.15_79221565_79229580_1	chr12	-	1614	2	ISM	ENSMUSG00000066441.15	ENST00000428130.6	933	5	6303	-1099	6303	-454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATCTAGAGGATCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	79229580	79221564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_79223025_79229426
ENSMUSG00000066441.15_79221689_79231953_1	chr12	-	1582	3	ISM	ENSMUSG00000066441.15	ENSMUST00000085254.7	1673	7	5782	-636	3930	-578	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCATTTCAGGAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	79231953	79221688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_79223025_79229426_79229617_79231897
ENSMUSG00000066441.15_79221739_79232008_1	chr12	-	1587	3	ISM	ENSMUSG00000066441.15	ENSMUST00000085254.7	1673	7	5727	-586	3875	586	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTCAGTTCATAATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	79232008	79221738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_79223025_79229426_79229617_79231897
ENSMUSG00000066441.15_79222010_79235324_1	chr12	-	1590	5	ISM	ENSMUSG00000066441.15	ENSMUST00000085254.7	1673	7	2411	-315	559	315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAAGGGAGACACTATC	NA	NA	NA	NA	NA	NA	NA	NA	79235324	79222009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254
ENSMUSG00000066441.15_79222057_79235389_1	chr12	-	1608	5	ISM	ENSMUSG00000066441.15	ENSMUST00000085254.7	1673	7	2346	-268	494	268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCAGAGATGGGACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	79235389	79222056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254
ENSMUSG00000066441.15_79222325_79238567_1	chr12	-	1548	7	FSM	ENSMUSG00000066441.15	ENSMUST00000161204.8	3262	7	500	1214	500	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGCTGTTTCTCAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	79238567	79222324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79235762_79235882_79238499
ENSMUSG00000066441.15_79222664_79235357_1	chr12	-	759	4	ISM	ENSMUSG00000066441.15	ENST00000428130.6	933	5	526	0	526	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAACTCCCCCTAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	79235357	79222663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_79223025_79229426_79229617_79233187_79233293_79235254
ENSMUSG00000066441.15_79222724_79235828_1	chr12	-	816	5	NNC	ENSMUSG00000066441.15	novel	933	5	NA	NA	55	-60	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGTGGTATCACTAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	79235828	79222723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_79223025_79229426_79229617_79233187_79233293_79235254_79235411_79235764
ENSMUSG00000066441.15_79222821_79235828_1	chr12	-	721	5	FSM	ENSMUSG00000066441.15	ENST00000428130.6	933	5	55	157	55	-157	multi-exon	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTTGGCATCCAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	79235828	79222820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_79223025_79229426_79229617_79233187_79233293_79235254_79235411_79235762
ENSMUSG00000066442.18_89093210_89122024_1	chr9	+	547	3	FSM	ENSMUSG00000066442.18	ENSMUST00000085256.8	816	3	0	269	0	-269	multi-exon	TRUE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCTTTGGCTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	89093209	89122024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_89093365_89097261_89097524_89121894
ENSMUSG00000066442.18_89097260_89122168_1	chr9	+	538	2	ISM	ENSMUSG00000066442.18	ENSMUST00000085256.8	816	3	4050	125	4050	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACATATGTATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	89097259	89122168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89097524_89121894
ENSMUSG00000066442.18_89097316_89122293_1	chr9	+	607	2	ISM	ENSMUSG00000066442.18	ENSMUST00000085256.8	816	3	4106	0	4106	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTAGAATATTAATGCAA	NA	NA	NA	NA	NA	NA	NA	NA	89097315	89122293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89097524_89121894
ENSMUSG00000066442.18_89097444_89122293_1	chr9	+	479	2	ISM	ENSMUSG00000066442.18	ENSMUST00000085256.8	816	3	4234	0	4234	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTAGAATATTAATGCAA	NA	NA	NA	NA	NA	NA	NA	NA	89097443	89122293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_89097524_89121894
ENSMUSG00000066456.15_82992431_83002476_1	chr9	-	298	5	ISM	ENSMUSG00000066456.15	ENSMUST00000162246.9	983	6	26262	430	26047	-430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGGGTCGATTTCACGTA	NA	NA	NA	NA	NA	NA	NA	NA	83002476	82992430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_82992483_82993045_82993160_82994272_82994324_82996825_82996856_83002425
ENSMUSG00000066456.15_82992431_83028529_1	chr9	-	303	6	FSM	ENSMUSG00000066456.15	ENSMUST00000161796.9	862	6	129	430	-6	-430	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGGGTCGATTTCACGTA	NA	NA	NA	NA	NA	NA	NA	NA	83028529	82992430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_82992483_82993086_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
ENSMUSG00000066551.13_148983643_148989826_1	chr5	-	2683	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	24	131	-5	-131	multi-exon	FALSE	canonical	NA	NA	NA	NA	14245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCGTAATGGTCTCGATTA	NA	NA	NA	NA	NA	NA	NA	NA	148989826	148983642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
ENSMUSG00000066551.13_148983643_148989826_2	chr5	-	2676	5	NNC	ENSMUSG00000066551.13	novel	2838	5	NA	NA	-5	-131	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCGTAATGGTCTCGATTA	NA	NA	NA	NA	NA	NA	NA	NA	148989826	148983642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_148985724_148986536_148986712_148987104_148987251_148987404_148987562_148989709
ENSMUSG00000066568.13_34044679_34050870_1	chr7	-	922	3	ISM	ENSMUSG00000066568.13	ENST00000540746.6	2144	10	38160	13	38033	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTCAGCAAACATACGT	NA	NA	NA	NA	NA	NA	NA	NA	34050870	34044678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_34045384_34047350_34047408_34050710
ENSMUSG00000066568.13_34044719_34050795_1	chr7	-	807	3	ISM	ENSMUSG00000066568.13	ENST00000540746.6	2144	10	38235	53	38108	-53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGTATAAAAAGCAACTAAT	NA	NA	NA	NA	NA	NA	NA	NA	34050795	34044718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_34045384_34047350_34047408_34050710
ENSMUSG00000066568.13_34050801_34053124_1	chr7	-	349	3	ISM	ENSMUSG00000066568.13	ENST00000403062.2	1389	10	35779	5441	35779	-5441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGGAGGAACCTTCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	34053124	34050800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_34050943_34052814_34052987_34053089
ENSMUSG00000066568.13_34050854_34053173_1	chr7	-	345	3	ISM	ENSMUSG00000066568.13	ENST00000403062.2	1389	10	35730	5494	35730	-5494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGAGGCAGAGGAGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	34053173	34050853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_34050943_34052814_34052987_34053089
ENSMUSG00000066568.13_34050905_34053224_1	chr7	-	345	3	ISM	ENSMUSG00000066568.13	ENST00000403062.2	1389	10	35679	5545	35679	-5545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGAAACTTTTGGCATC	NA	NA	NA	NA	NA	NA	NA	NA	34053224	34050904	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_34050943_34052814_34052987_34053089
ENSMUSG00000066568.13_34052908_34057257_1	chr7	-	392	4	ISM	ENSMUSG00000066568.13	ENST00000403062.2	1389	10	31646	7548	31646	-7548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAATGCTGATGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	34057257	34052907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_34052987_34053089_34053273_34056858_34056922_34057190
ENSMUSG00000066568.13_34053239_34065162_1	chr7	-	397	4	ISM	ENSMUSG00000066568.13	ENST00000403062.2	1389	10	23741	7879	23741	-7879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGTCATCGAGGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	34065162	34053238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_34053273_34056858_34056922_34057190_34057368_34065039
ENSMUSG00000066568.13_34057297_34074687_1	chr7	-	358	4	ISM	ENSMUSG00000066568.13	ENST00000403062.2	1389	10	14216	11937	14216	-11937	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACTTACCTGCTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	34074687	34057296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_34057368_34065039_34065163_34070479_34070610_34074653
ENSMUSG00000066613.15_110144429_110158156_1	chr5	+	1918	4	FSM	ENSMUSG00000066613.15	ENSMUST00000112540.8	2081	4	42	121	41	-114	multi-exon	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTAGAACTCTTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	110144428	110158156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497
ENSMUSG00000066613.15_110154809_110158277_1	chr5	+	1969	3	FSM	ENSMUSG00000066613.15	ENSMUST00000112536.8	2509	3	547	-7	327	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTCATGGTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	110154808	110158277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_110154937_110155121_110155183_110156497
ENSMUSG00000066637.3_9080131_9086412_1	chr12	+	884	3	FSM	ENSMUSG00000066637.3	ENSMUST00000085741.2	1000	3	134	-18	103	15	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGACAAAGCTTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	9080130	9086412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_9080197_9084921_9085089_9085761
ENSMUSG00000066721.4_24285217_24286161_1	chr7	-	430	2	ISM	ENSMUSG00000066721.4	ENSMUST00000094705.3	2741	4	905	1954	905	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGCCCCGATTGCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	24286161	24285216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_24285564_24286078
ENSMUSG00000066721.4_24285259_24286226_1	chr7	-	453	2	ISM	ENSMUSG00000066721.4	ENSMUST00000094705.3	2741	4	840	1996	840	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGGCGCATCTCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	24286226	24285258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_24285564_24286078
ENSMUSG00000066721.4_24285309_24286285_1	chr7	-	462	2	ISM	ENSMUSG00000066721.4	ENSMUST00000094705.3	2741	4	781	2046	781	-362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGCACTCCTGCCCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	24286285	24285308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_24285564_24286078
ENSMUSG00000066721.4_24285421_24293950_1	chr7	-	458	3	NNC	ENSMUSG00000066721.4	novel	1325	4	NA	NA	850	-474	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCACCGGCTAGCGCACGG	NA	NA	NA	NA	NA	NA	NA	NA	24293950	24285420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_24285564_24286078_24286315_24293871
ENSMUSG00000066721.4_24285429_24293928_1	chr7	-	434	3	ISM	ENSMUSG00000066721.4	ENST00000458714.2	1325	4	872	482	872	-482	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGCCACGCACCGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	24293928	24285428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_24285564_24286078_24286315_24293865
ENSMUSG00000066721.4_24285476_24293982_1	chr7	-	441	3	ISM	ENSMUSG00000066721.4	ENST00000458714.2	1325	4	818	529	818	-529	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCACCGCTGCCCGGATT	NA	NA	NA	NA	NA	NA	NA	NA	24293982	24285475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_24285564_24286078_24286315_24293865
ENSMUSG00000066721.4_24285524_24294038_1	chr7	-	449	3	ISM	ENSMUSG00000066721.4	ENST00000458714.2	1325	4	762	577	762	-577	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGGAGCGTGCCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	24294038	24285523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_24285564_24286078_24286315_24293865
ENSMUSG00000066735.9_129970811_130011082_1	chr5	+	607	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	0	2505	0	-338	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTTTGCATCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	129970810	130011082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_129971207_130007359_130007470_130010981
ENSMUSG00000066735.9_129971015_130011321_1	chr5	+	642	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	204	2266	47	-99	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCTTAAACTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	129971014	130011321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_129971207_130007359_130007470_130010981
ENSMUSG00000066735.9_130007407_130011530_1	chr5	+	612	2	ISM	ENSMUSG00000066735.9	ENSMUST00000073945.6	650	3	36439	-110	36439	110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTTTAATGTGTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	130007406	130011530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130007470_130010981
ENSMUSG00000066735.9_130011809_130014160_1	chr5	+	696	2	ISM	ENSMUSG00000066735.9	ENST00000648179.1	2208	5	40901	1395	40841	573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTTAACTAGTTGCACTA	NA	NA	NA	NA	NA	NA	NA	NA	130011808	130014160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130012484_130014139
ENSMUSG00000066735.9_130011920_130014164_1	chr5	+	589	2	ISM	ENSMUSG00000066735.9	ENST00000648179.1	2208	5	41012	1391	40952	577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTAGTTGCACTAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	130011919	130014164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130012484_130014139
ENSMUSG00000066735.9_130012078_130015417_2	chr5	+	558	2	NNC	ENSMUSG00000066735.9	novel	4809	2	NA	NA	41110	-116	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAGGATAGCATTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	130012077	130015417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_130012493_130015274
ENSMUSG00000066735.9_130012078_130015417_4	chr5	+	565	3	ISM	ENSMUSG00000066735.9	ENST00000648179.1	2208	5	41170	138	41110	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAGGATAGCATTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	130012077	130015417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130012484_130014139_130014163_130015281
ENSMUSG00000066735.9_130012078_130015555_1	chr5	+	703	3	ISM	ENSMUSG00000066735.9	ENST00000648179.1	2208	5	41170	0	41110	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGTGGAGTCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	130012077	130015555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_130012484_130014139_130014163_130015281
ENSMUSG00000066735.9_130012078_130015555_4	chr5	+	696	2	NNC	ENSMUSG00000066735.9	novel	2372	5	NA	NA	41110	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGTGGAGTCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	130012077	130015555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_130012493_130015274
ENSMUSG00000066829.8_22188202_22191811_1	chr9	-	2438	2	ISM	ENSMUSG00000066829.8	ENSMUST00000086278.7	3238	8	27123	158	27123	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAGTGAAATTTCAACAT	NA	NA	NA	NA	NA	NA	NA	NA	22191811	22188201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_22190577_22191748
ENSMUSG00000066829.8_22188403_22195367_1	chr9	-	2429	4	ISM	ENSMUSG00000066829.8	ENSMUST00000086278.7	3238	8	23567	359	23567	-359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCAAATTGATCATGACT	NA	NA	NA	NA	NA	NA	NA	NA	22195367	22188402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312
ENSMUSG00000066829.8_22188834_22218934_1	chr9	-	2448	8	FSM	ENSMUSG00000066829.8	ENSMUST00000086278.7	3238	8	0	790	0	-790	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAATATAAAGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	22218934	22188833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22218844
ENSMUSG00000066838.8_7205116_7212799_1	chr7	-	2579	5	FSM	ENSMUSG00000066838.8	ENSMUST00000074455.9	2777	5	198	0	198	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCATGACTATTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	7212799	7205115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523_7210563_7212716
ENSMUSG00000066838.8_7205268_7212862_1	chr7	-	2490	5	FSM	ENSMUSG00000066838.8	ENSMUST00000074455.9	2777	5	135	152	135	-152	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCATGTTACTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	7212862	7205267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523_7210563_7212716
ENSMUSG00000066838.8_7205338_7212997_1	chr7	-	2555	5	FSM	ENSMUSG00000066838.8	ENSMUST00000074455.9	2777	5	0	222	0	-222	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTTAATGCTTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	7212997	7205337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523_7210563_7212716
ENSMUSG00000066839.13_21983542_21987941_1	chr9	-	1290	6	ISM	ENSMUSG00000066839.13	ENSMUST00000179422.8	1462	8	8757	0	-148	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	21987941	21983541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523
ENSMUSG00000066839.13_21983706_21987631_1	chr9	-	667	5	FSM	ENSMUSG00000066839.13	ENST00000252440.11	829	5	162	0	162	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTCCCCTCCCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	21987631	21983705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21983877_21984277_21984384_21984978_21985037_21985886_21986111_21987523
ENSMUSG00000066839.13_21983706_21987717_1	chr9	-	751	5	NNC	ENSMUSG00000066839.13	novel	829	5	NA	NA	76	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTCCCCTCCCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	21987717	21983705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_21983877_21984277_21984384_21984978_21985037_21985888_21986111_21987523
ENSMUSG00000066839.13_21983706_21987717_2	chr9	-	747	5	NNC	ENSMUSG00000066839.13	novel	829	5	NA	NA	76	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTCCCCTCCCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	21987717	21983705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_21983871_21984277_21984384_21984978_21985037_21985886_21986111_21987523
ENSMUSG00000066839.13_21983766_21985986_1	chr9	-	632	4	ISM	ENSMUSG00000066839.13	ENST00000592312.5	1042	5	1807	16	1807	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTATTCCGCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	21985986	21983765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21983877_21984277_21984384_21984721_21985037_21985886
ENSMUSG00000066839.13_21983773_21987773_1	chr9	-	742	5	FSM	ENSMUSG00000066839.13	ENST00000252440.11	829	5	20	67	20	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATCCCAGTGGTATTCCG	NA	NA	NA	NA	NA	NA	NA	NA	21987773	21983772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21983877_21984277_21984384_21984978_21985037_21985886_21986111_21987523
ENSMUSG00000066839.13_21983785_21995392_1	chr9	-	1239	8	ISM	ENSMUSG00000066839.13	ENSMUST00000098937.10	1673	9	1331	243	1306	-35	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCCTGGCACAGATCCC	NA	NA	NA	NA	NA	NA	NA	NA	21995392	21983784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318
ENSMUSG00000066839.13_21984317_21987609_1	chr9	-	692	4	ISM	ENSMUSG00000066839.13	ENST00000592312.5	1042	5	184	567	184	-567	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGGTTGGGACGACTAT	NA	NA	NA	NA	NA	NA	NA	NA	21987609	21984316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21984384_21984721_21985037_21985886_21986111_21987523
ENSMUSG00000066839.13_21987743_21996709_1	chr9	-	560	4	ISM	ENSMUSG00000066839.13	ENSMUST00000180180.8	1676	9	25	4201	-11	-3993	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTGCGCAAGCGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	21996709	21987742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21987942_21989443_21989562_21995318_21995505_21996652
ENSMUSG00000066880.16_72676696_72686755_1	chr8	+	1202	4	FSM	ENSMUSG00000066880.16	ENSMUST00000119003.2	2920	4	0	1718	0	-1718	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACATCTGTAAGCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	72676695	72686755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_72676817_72682045_72682173_72682981_72683043_72685862
ENSMUSG00000066892.15_20550097_20553609_1	chr9	-	600	3	FSM	ENSMUSG00000066892.15	ENST00000592067.1	645	3	7	38	0	-38	multi-exon	FALSE	canonical	NA	NA	NA	NA	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCGGGTCACTGAGACCG	NA	NA	NA	NA	NA	NA	NA	NA	20553609	20550096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_20550520_20553299_20553393_20553525
ENSMUSG00000066892.15_20550097_20553609_2	chr9	-	598	3	NNC	ENSMUSG00000066892.15	novel	645	3	NA	NA	0	-38	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCGGGTCACTGAGACCG	NA	NA	NA	NA	NA	NA	NA	NA	20553609	20550096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_20550520_20553299_20553393_20553527
ENSMUSG00000066892.15_20550097_20553609_3	chr9	-	595	3	NNC	ENSMUSG00000066892.15	novel	645	3	NA	NA	0	-38	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1052	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCGGGTCACTGAGACCG	NA	NA	NA	NA	NA	NA	NA	NA	20553609	20550096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_20550520_20553304_20553393_20553525
ENSMUSG00000066975.13_112394531_112399668_1	chr5	-	614	5	FSM	ENSMUSG00000066975.13	ENSMUST00000086629.6	746	5	0	132	0	-132	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCGACCTGGGGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	112399668	112394530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_112394685_112396040_112396184_112397034_112397177_112398884_112399004_112399612
ENSMUSG00000066979.7_131161951_131168080_1	chr7	+	809	5	ISM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	0	5541	0	-2370	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCCACCCCTCCTCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	131161950	131168080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921
ENSMUSG00000066979.7_131162109_131169925_1	chr7	+	664	6	ISM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	158	3696	158	-525	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATCGAAGGCCGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	131162108	131169925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912
ENSMUSG00000066979.7_131162109_131170090_1	chr7	+	829	6	ISM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	158	3531	158	-360	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGTGGGACACACAGGC	NA	NA	NA	NA	NA	NA	NA	NA	131162108	131170090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912
ENSMUSG00000066979.7_131162439_131170275_1	chr7	+	796	6	FSM	ENSMUSG00000066979.7	ENSMUST00000207442.2	3414	6	0	2618	0	-175	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCGCCTGTGCCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	131162438	131170275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233
ENSMUSG00000066979.7_131162552_131170323_1	chr7	+	731	6	FSM	ENSMUSG00000066979.7	ENSMUST00000207442.2	3414	6	113	2570	113	-127	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTTCAGTAATGACGGA	NA	NA	NA	NA	NA	NA	NA	NA	131162551	131170323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233
ENSMUSG00000066979.7_131162595_131170450_1	chr7	+	815	6	FSM	ENSMUSG00000066979.7	ENSMUST00000207442.2	3414	6	156	2443	156	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGGCTTCACCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	131162594	131170450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233
ENSMUSG00000066979.7_131165104_131172679_1	chr7	+	737	5	ISM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	3153	942	2665	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTGCAGCCATTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	131165103	131172679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ENSMUSG00000066979.7_131165154_131172732_1	chr7	+	740	5	ISM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	3203	889	2715	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAACAGAATTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	131165153	131172732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ENSMUSG00000066979.7_131167956_131172893_1	chr7	+	806	4	ISM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	6005	728	5517	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTTTTAAAAGTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	131167955	131172893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_131168081_131169912_131170091_131170233_131170451_131172607
ENSMUSG00000066979.7_131170236_131173134_1	chr7	+	742	2	ISM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	8285	487	7797	241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGCAGCTTCTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	131170235	131173134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_131170451_131172607
ENSMUSG00000066979.7_131170274_131173200_1	chr7	+	770	2	ISM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	8323	421	7835	307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGGGCTCATGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	131170273	131173200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_131170451_131172607
ENSMUSG00000066979.7_131170342_131173234_1	chr7	+	736	2	ISM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	8391	387	7903	341	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCTCTGTAGACAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	131170341	131173234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_131170451_131172607
ENSMUSG00000067001.12_107356016_107379633_1	chr1	+	944	6	NNC	ENSMUSG00000067001.12	novel	1280	6	NA	NA	38	-292	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCTTCCTGAGTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	107356015	107379633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_107356147_107363056_107363174_107373721_107373844_107375848_107375981_107377905_107378053_107379338
ENSMUSG00000067001.12_107356016_107379633_2	chr1	+	950	6	FSM	ENSMUSG00000067001.12	ENST00000540675.5	1280	6	38	292	38	-292	multi-exon	FALSE	canonical	NA	NA	NA	NA	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCTTCCTGAGTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	107356015	107379633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_107356147_107363056_107363174_107373721_107373844_107375842_107375981_107377905_107378053_107379338
ENSMUSG00000067001.12_107363055_107379814_1	chr1	+	1002	5	ISM	ENSMUSG00000067001.12	ENST00000540675.5	1280	6	7077	111	7077	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTGCTTTGATTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	107363054	107379814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_107363174_107373721_107373844_107375842_107375981_107377905_107378053_107379338
ENSMUSG00000067001.12_107373720_107379814_2	chr1	+	885	4	ISM	ENSMUSG00000067001.12	ENST00000540675.5	1280	6	17742	111	17742	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTGCTTTGATTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	107373719	107379814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_107373844_107375842_107375981_107377905_107378053_107379338
ENSMUSG00000067001.12_107373720_107379925_1	chr1	+	996	4	ISM	ENSMUSG00000067001.12	ENST00000540675.5	1280	6	17742	0	17742	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTACTTCCCTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	107373719	107379925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_107373844_107375842_107375981_107377905_107378053_107379338
ENSMUSG00000067001.12_107375843_107379925_1	chr1	+	872	3	ISM	ENSMUSG00000067001.12	ENST00000540675.5	1280	6	19865	0	19865	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTACTTCCCTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	107375842	107379925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_107375981_107377905_107378053_107379338
ENSMUSG00000067071.9_91339205_91340944_1	chr1	-	1327	4	NNC	ENSMUSG00000067071.9	novel	1335	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATGTGTCCAATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	91340944	91339204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_91340205_91340442_91340525_91340622_91340702_91340778
ENSMUSG00000067071.9_91339205_91340944_2	chr1	-	1329	4	NIC	ENSMUSG00000067071.9	novel	1335	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	2911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATGTGTCCAATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	91340944	91339204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_-_91340205_91340442_91340519_91340614_91340702_91340778
ENSMUSG00000067071.9_91339205_91340944_3	chr1	-	1327	4	NNC	ENSMUSG00000067071.9	novel	1335	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATGTGTCCAATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	91340944	91339204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_91340197_91340442_91340525_91340614_91340702_91340778
ENSMUSG00000067071.9_91339205_91340944_4	chr1	-	1326	4	NNC	ENSMUSG00000067071.9	novel	1335	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATGTGTCCAATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	91340944	91339204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_91340205_91340442_91340525_91340614_91340693_91340778
ENSMUSG00000067071.9_91340070_91340670_1	chr1	-	233	3	FSM	ENSMUSG00000067071.9	ENST00000409574.1	516	3	33	250	33	-250	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGAATCCATGCCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	91340670	91340069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_91340205_91340482_91340525_91340614
ENSMUSG00000067148.16_46554846_46555601_1	chr17	-	568	3	ISM	ENSMUSG00000067148.16	ENSMUST00000124655.8	829	7	1898	-181	1898	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTTTTTTTTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	46555601	46554845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46555147_46555231_46555349_46555451
ENSMUSG00000067148.16_46555859_46558858_1	chr17	-	490	6	ISM	ENSMUSG00000067148.16	ENSMUST00000087026.13	1314	9	122	1013	122	-832	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTCCCCTTGGGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	46558858	46555858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
ENSMUSG00000067150.7_46549831_46552765_1	chr17	+	589	6	ISM	ENSMUSG00000067150.7	ENSMUST00000087031.7	5081	32	36123	1759	36123	-1759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAACGACGGAAGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	46549830	46552765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651
ENSMUSG00000067194.7_158155352_158162783_1	chrX	+	357	5	ISM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	178	10141	178	-10141	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGGCGAGCTTCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	158155351	158162783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725
ENSMUSG00000067194.7_158159375_158165775_1	chrX	+	415	5	ISM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	4201	7149	4201	-7149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGACACATCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	158159374	158165775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683
ENSMUSG00000067194.7_158160486_158168485_1	chrX	+	380	5	ISM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	5312	4439	5312	-4439	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAATTTTCACTATCATC	NA	NA	NA	NA	NA	NA	NA	NA	158160485	158168485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ENSMUSG00000067194.7_158160545_158168552_1	chrX	+	388	5	ISM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	5371	4372	5371	-4372	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTTAACTGATACGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	158160544	158168552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ENSMUSG00000067194.7_158162744_158168621_1	chrX	+	374	3	ISM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	7570	4303	7570	-4303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTTTCCTACTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	158162743	158168621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_158162808_158165683_158165776_158168403
ENSMUSG00000067206.4_73765065_73787203_1	chr5	-	818	4	FSM	ENSMUSG00000067206.4	ENST00000682860.1	970	4	152	0	152	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTCTTAGGCCAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	73787203	73765064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_73765197_73768108_73768295_73772821_73772992_73786873
ENSMUSG00000067212.9_36340868_36342576_1	chr17	-	717	4	NNC	ENSMUSG00000067212.9	novel	1472	7	NA	NA	1171	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATGAATGAATGAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	36342576	36340867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_36341124_36341448_36341587_36341713_36341990_36342529
ENSMUSG00000067212.9_36340912_36342615_1	chr17	-	721	5	ISM	ENSMUSG00000067212.9	ENSMUST00000102678.5	1472	7	1132	44	1132	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAATAAATAAATAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	36342615	36340911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36341124_36341262_36341293_36341469_36341587_36341713_36341990_36342529
ENSMUSG00000067212.9_36340912_36342688_1	chr17	-	794	5	ISM	ENSMUSG00000067212.9	ENSMUST00000102678.5	1472	7	1059	44	1059	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAATAAATAAATAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	36342688	36340911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36341124_36341262_36341293_36341469_36341587_36341713_36341990_36342529
ENSMUSG00000067212.9_36341044_36342737_1	chr17	-	711	5	ISM	ENSMUSG00000067212.9	ENSMUST00000102678.5	1472	7	1010	176	1010	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGCACTGACTGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	36342737	36341043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36341124_36341262_36341293_36341469_36341587_36341713_36341990_36342529
ENSMUSG00000067212.9_36341479_36343072_1	chr17	-	688	4	ISM	ENSMUSG00000067212.9	ENSMUST00000102678.5	1472	7	675	611	675	-611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACATAGGTAGGAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	36343072	36341478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36341587_36341713_36341990_36342529_36342806_36343044
ENSMUSG00000067212.9_36341519_36343134_1	chr17	-	710	4	ISM	ENSMUSG00000067212.9	ENSMUST00000102678.5	1472	7	613	651	613	-651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGGAGCTGTGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	36343134	36341518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36341587_36341713_36341990_36342529_36342806_36343044
ENSMUSG00000067212.9_36341714_36343314_1	chr17	-	822	3	ISM	ENSMUSG00000067212.9	ENSMUST00000102678.5	1472	7	433	846	433	-846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGAGGGTGTGGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	36343314	36341713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36341990_36342529_36342806_36343044
ENSMUSG00000067212.9_36341957_36343657_1	chr17	-	736	4	ISM	ENSMUSG00000067212.9	ENSMUST00000102678.5	1472	7	90	1089	90	-1089	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTGAAGATGAAGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	36343657	36341956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36341990_36342529_36342806_36343044_36343315_36343500
ENSMUSG00000067220.13_72761039_72774129_1	chr5	-	2272	5	ISM	ENSMUSG00000067220.13	ENST00000420489.7	2345	7	2287	-89	2287	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGAGTAAATGTGATTTA	NA	NA	NA	NA	NA	NA	NA	NA	72774129	72761038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_72762873_72766797_72766905_72768151_72768260_72769503_72769615_72774017
ENSMUSG00000067220.13_72761296_72775583_1	chr5	-	2086	6	ISM	ENSMUSG00000067220.13	ENST00000420489.7	2345	7	833	168	833	162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCATCTTCTCCTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	72775583	72761295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_72762873_72766797_72766905_72768151_72768260_72769503_72769615_72774017_72774128_72775510
ENSMUSG00000067220.13_72761458_72776393_1	chr5	-	1992	7	FSM	ENSMUSG00000067220.13	ENST00000420489.7	2345	7	23	330	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTGGTCAACAGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	72776393	72761457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_72762873_72766797_72766905_72768151_72768260_72769503_72769615_72774017_72774128_72775510_72775613_72776354
ENSMUSG00000067220.13_72762168_72776497_1	chr5	-	1386	7	FSM	ENSMUSG00000067220.13	ENST00000402813.9	2407	7	-19	1040	0	-710	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCTGACAAACTAAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	72776497	72762167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_72762873_72766797_72766905_72768151_72768260_72769503_72769615_72774017_72774128_72775510_72775613_72776354
ENSMUSG00000067220.13_72762400_72776497_1	chr5	-	1154	7	FSM	ENSMUSG00000067220.13	ENST00000402813.9	2407	7	-19	1272	0	-942	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGACTTCTTAATTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	72776497	72762399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_72762873_72766797_72766905_72768151_72768260_72769503_72769615_72774017_72774128_72775510_72775613_72776354
ENSMUSG00000067242.12_38253393_38254250_1	chr19	+	390	2	FSM	ENSMUSG00000067242.12	ENST00000627699.1	654	2	131	133	131	-133	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCACATCCACCATAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	38253392	38254250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_38253555_38254022
ENSMUSG00000067242.12_38254021_38289773_1	chr19	+	625	6	ISM	ENSMUSG00000067242.12	ENST00000637689.1	1794	8	871	5434	759	-5177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATATAAAAAAAAAACCTA	NA	NA	NA	NA	NA	NA	NA	NA	38254020	38289773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38254095_38272417_38272490_38272589_38272662_38286376_38286449_38289155_38289326_38289608
ENSMUSG00000067242.12_38272418_38294094_1	chr19	+	578	6	ISM	ENSMUSG00000067242.12	ENST00000637689.1	1794	8	19268	1113	19156	-856	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTATTGACACTCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	38272417	38294094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38272490_38272589_38272662_38286376_38286449_38289155_38289326_38289608_38289774_38294067
ENSMUSG00000067242.12_38286397_38294244_1	chr19	+	564	4	ISM	ENSMUSG00000067242.12	ENSMUST00000196090.2	1789	6	33278	706	33135	-706	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGAAGACAACTGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	38286396	38294244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38286449_38289155_38289326_38289608_38289774_38294067
ENSMUSG00000067242.12_38289215_38294368_1	chr19	+	577	3	ISM	ENSMUSG00000067242.12	ENSMUST00000196090.2	1789	6	36096	582	35953	-582	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGTGGAATACCTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	38289214	38294368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38289326_38289608_38289774_38294067
ENSMUSG00000067242.12_38289275_38294420_1	chr19	+	569	3	ISM	ENSMUSG00000067242.12	ENSMUST00000196090.2	1789	6	36156	530	36013	-530	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAATCCTGTCCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	38289274	38294420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38289326_38289608_38289774_38294067
ENSMUSG00000067242.12_38289721_38294597_1	chr19	+	583	2	ISM	ENSMUSG00000067242.12	ENSMUST00000196090.2	1789	6	36602	353	36459	-353	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGAAGTGGGGCGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	38289720	38294597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_38289774_38294067
ENSMUSG00000067274.11_115697526_115701788_1	chr5	+	1353	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	61065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAAGCCTGGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	115697525	115701788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_115697592_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ENSMUSG00000067274.11_115697526_115701788_2	chr5	+	1354	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	61065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAAGCCTGGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	115697525	115701788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701347
ENSMUSG00000067274.11_115697526_115701788_3	chr5	+	1353	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	61064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAAGCCTGGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	115697525	115701788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_115697599_115697845_115697948_115698799_115699064_115699164_115699305_115699391_115699578_115700484_115700626_115701341
ENSMUSG00000067276.6_142585562_142588479_1	chrX	-	1609	4	ISM	ENSMUSG00000067276.6	ENSMUST00000087316.6	3561	13	21931	335	21931	-335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTATGTTCTTCCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	142588479	142585561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_142586823_142587352_142587490_142587670_142587793_142588390
ENSMUSG00000067288.14_34042011_34043320_1	chr17	-	262	3	ISM	ENSMUSG00000067288.14	ENSMUST00000087342.13	392	4	216	1	130	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTTTTTCCAGCAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	34043320	34042010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34042091_34042170_34042305_34043272
ENSMUSG00000067288.14_34042011_34043536_1	chr17	-	388	4	NNC	ENSMUSG00000067288.14	novel	392	4	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTTTTTCCAGCAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	34043536	34042010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_34042091_34042170_34042298_34043268_34043321_34043407
ENSMUSG00000067336.7_59852815_59898433_1	chr1	+	1234	9	ISM	ENSMUSG00000067336.7	ENSMUST00000087435.7	12899	13	50256	19740	69	-11597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTTCCCAGAAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	59852814	59898433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59852918_59854399_59854571_59880589_59880701_59881901_59881994_59884636_59884868_59886216_59886332_59890336_59890498_59891452_59891601_59898331
ENSMUSG00000067336.7_59854425_59902962_1	chr1	+	1164	9	ISM	ENSMUSG00000067336.7	ENST00000638587.1	3432	12	1679	7068	1679	-7068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAAGACTGCTGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	59854424	59902962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59854571_59880589_59880701_59881901_59881994_59884636_59884868_59886216_59886332_59890336_59890498_59891452_59891601_59898331_59898469_59902939
ENSMUSG00000067336.7_59854516_59903091_1	chr1	+	1202	9	ISM	ENSMUSG00000067336.7	ENST00000638587.1	3432	12	1770	6939	1770	-6939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGCTATGCAGAATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	59854515	59903091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59854571_59880589_59880701_59881901_59881994_59884636_59884868_59886216_59886332_59890336_59890498_59891452_59891601_59898331_59898469_59902939
ENSMUSG00000067336.7_59881976_59906707_1	chr1	+	1196	8	ISM	ENSMUSG00000067336.7	ENST00000638587.1	3432	12	29230	3323	29230	-3323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAGAAACAAGCGTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	59881975	59906707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59881994_59884636_59884868_59886216_59886332_59890336_59890498_59891452_59891601_59898331_59898469_59902939_59903113_59906494
ENSMUSG00000067336.7_59884777_59906855_1	chr1	+	1186	7	ISM	ENSMUSG00000067336.7	ENST00000638587.1	3432	12	32031	3175	32031	-3175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCAACCCCTGTCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	59884776	59906855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59884868_59886216_59886332_59890336_59890498_59891452_59891601_59898331_59898469_59902939_59903113_59906494
ENSMUSG00000067336.7_59886313_59907039_1	chr1	+	1183	6	ISM	ENSMUSG00000067336.7	ENST00000638587.1	3432	12	33567	2991	33567	-2991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCTCGCAGTGGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	59886312	59907039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59886332_59890336_59890498_59891452_59891601_59898331_59898469_59902939_59903113_59906494
ENSMUSG00000067336.7_59890422_59907167_1	chr1	+	1207	5	ISM	ENSMUSG00000067336.7	ENST00000638587.1	3432	12	37676	2863	37676	-2863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTACTAGTTTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	59890421	59907167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59890498_59891452_59891601_59898331_59898469_59902939_59903113_59906494
ENSMUSG00000067336.7_59891538_59907320_1	chr1	+	1199	4	ISM	ENSMUSG00000067336.7	ENST00000638587.1	3432	12	38792	2710	38792	-2710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGAATGGTGTGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	59891537	59907320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59891601_59898331_59898469_59902939_59903113_59906494
ENSMUSG00000067336.7_59902979_59907531_1	chr1	+	1171	2	ISM	ENSMUSG00000067336.7	ENST00000638587.1	3432	12	50233	2499	50233	-2499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGCTGGCCATGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	59902978	59907531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59903113_59906494
ENSMUSG00000067336.7_59903035_59907580_1	chr1	+	1164	2	ISM	ENSMUSG00000067336.7	ENST00000638587.1	3432	12	50289	2450	50289	-2450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACGGCCATTAGAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	59903034	59907580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59903113_59906494
ENSMUSG00000067336.7_59903085_59907635_1	chr1	+	1169	2	ISM	ENSMUSG00000067336.7	ENST00000638587.1	3432	12	50339	2395	50339	-2395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCAGAACAAGATATCCT	NA	NA	NA	NA	NA	NA	NA	NA	59903084	59907635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59903113_59906494
ENSMUSG00000067336.7_59906952_59909726_1	chr1	+	1156	2	ISM	ENSMUSG00000067336.7	ENST00000638587.1	3432	12	54206	304	54206	-304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTGTCAGCACCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	59906951	59909726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59907775_59909393
ENSMUSG00000067336.7_59907149_59909927_1	chr1	+	1160	2	ISM	ENSMUSG00000067336.7	ENST00000638587.1	3432	12	54403	103	54403	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTTTTAAGAAAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	59907148	59909927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59907775_59909393
ENSMUSG00000067336.7_59907233_59910010_1	chr1	+	1159	2	ISM	ENSMUSG00000067336.7	ENST00000638587.1	3432	12	54487	20	54487	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGACAGGTTTGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	59907232	59910010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_59907775_59909393
ENSMUSG00000067365.12_38417715_38426978_1	chr5	+	1105	5	FSM	ENSMUSG00000067365.12	ENSMUST00000087511.10	1291	5	186	0	-13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTAATGCAAATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	38417714	38426978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426402
ENSMUSG00000067367.10_38377814_38391650_1	chr5	+	1558	9	NNC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGATAACAAATTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	38377813	38391650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_38377980_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388621_38388704_38390585_38390672_38391334
ENSMUSG00000067367.10_38377814_38391650_2	chr5	+	1557	9	NNC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	931	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGATAACAAATTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	38377813	38391650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_38377980_38381976_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ENSMUSG00000067367.10_38377814_38391650_3	chr5	+	1556	9	NNC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	910	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGATAACAAATTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	38377813	38391650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_38377980_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391341
ENSMUSG00000067369.13_133125328_133168099_1	chrX	-	1287	12	ISM	ENSMUSG00000067369.13	ENST00000372935.5	1718	13	9605	36	163	-36	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGGACGCTGCAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	133168099	133125327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079
ENSMUSG00000067369.13_133125378_133168149_1	chrX	-	1287	12	ISM	ENSMUSG00000067369.13	ENST00000372935.5	1718	13	9555	86	113	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCCCCACACCCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	133168149	133125377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079
ENSMUSG00000067369.13_133125382_133168148_1	chrX	-	1282	12	ISM	ENSMUSG00000067369.13	ENST00000372935.5	1718	13	9556	90	114	-90	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTCCCCACACCCC	NA	NA	NA	NA	NA	NA	NA	NA	133168148	133125381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079
ENSMUSG00000067369.13_133125399_133168154_1	chrX	-	1262	12	NNC	ENSMUSG00000067369.13	novel	3119	13	NA	NA	108	-107	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGCTGTACCTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	133168154	133125398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141112_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079
ENSMUSG00000067369.13_133125427_133168205_1	chrX	-	1294	12	ISM	ENSMUSG00000067369.13	ENST00000372935.5	1718	13	9499	135	57	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCCTAGGTGATCCATT	NA	NA	NA	NA	NA	NA	NA	NA	133168205	133125426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079
ENSMUSG00000067369.13_133139284_133177669_1	chrX	-	1352	11	ISM	ENSMUSG00000067369.13	ENST00000372935.5	1718	13	35	13992	0	-362	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGTTAAAGTCACAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	133177669	133139283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168355_133177564
ENSMUSG00000067377.13_132792242_132793429_1	chrX	-	450	2	ISM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	5749	425	5749	-425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAATTTCATCCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	132793429	132792241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132792673_132793410
ENSMUSG00000067377.13_132792351_132795263_1	chrX	-	443	3	ISM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	3915	534	3915	-534	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTCCTTGAGTGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	132795263	132792350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132792673_132793410_132793516_132795247
ENSMUSG00000067377.13_132792415_132795313_1	chrX	-	429	3	ISM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	3865	598	3865	-598	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGTCACTGGTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	132795313	132792414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132792673_132793410_132793516_132795247
ENSMUSG00000067377.13_132792504_132795331_1	chrX	-	358	3	ISM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	3847	687	3847	-687	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTGTAAATGAAATAATAC	NA	NA	NA	NA	NA	NA	NA	NA	132795331	132792503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132792673_132793410_132793516_132795247
ENSMUSG00000067377.13_132792606_132796282_1	chrX	-	490	5	ISM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	2896	789	2896	-789	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAGGCTGATTCAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	132796282	132792605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132792673_132793410_132793516_132795247_132795332_132795676_132795812_132796183
ENSMUSG00000067377.13_132793451_132797506_1	chrX	-	458	5	ISM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	1672	1634	1672	-1634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCACTACACACGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	132797506	132793450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132793516_132795247_132795332_132795676_132795812_132796183_132796283_132797431
ENSMUSG00000067377.13_132795270_132797928_1	chrX	-	427	5	ISM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	1250	3453	1250	-3453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGAGTTGCTTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	132797928	132795269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132795332_132795676_132795812_132796183_132796283_132797431_132797507_132797872
ENSMUSG00000067377.13_132797467_132799178_1	chrX	-	451	3	ISM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	0	5650	0	-5650	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCGCCATTGTTGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	132799178	132797466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_132797507_132797872_132798062_132798956
ENSMUSG00000067567.13_101328245_101351254_1	chrX	-	569	2	ISM	ENSMUSG00000067567.13	ENST00000647594.1	1714	11	197520	-60	124951	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCGTCCCACCGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	101351254	101328244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_101328775_101351215
ENSMUSG00000067567.13_101328245_101351352_1	chrX	-	638	2	ISM	ENSMUSG00000067567.13	ENST00000373583.6	1676	10	197434	-3	124853	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCGTCCCACCGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	101351352	101328244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_101328775_101351244
ENSMUSG00000067567.13_101328507_101449217_1	chrX	-	544	4	ISM	ENSMUSG00000067567.13	ENST00000647980.1	1658	11	99536	202	26988	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTTTTTAATGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	101449217	101328506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_101328775_101351244_101351351_101446190_101446286_101449142
ENSMUSG00000067567.13_101328558_101449271_1	chrX	-	547	4	ISM	ENSMUSG00000067567.13	ENST00000647980.1	1658	11	99482	253	26934	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGGGAAGAAGAAGATAG	NA	NA	NA	NA	NA	NA	NA	NA	101449271	101328557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_101328775_101351244_101351351_101446190_101446286_101449142
ENSMUSG00000067567.13_101328579_101449222_1	chrX	-	506	4	ISM	ENSMUSG00000067567.13	ENST00000647594.1	1714	11	99552	274	26983	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCACCCCGGAGCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	101449222	101328578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_101328775_101351215_101351351_101446190_101446286_101449142
ENSMUSG00000067567.13_101328686_101446250_1	chrX	-	255	3	ISM	ENSMUSG00000067567.13	ENST00000647980.1	1658	11	102503	381	29955	-381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCGGTTTGTGGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	101446250	101328685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_101328775_101351244_101351351_101446190
ENSMUSG00000067567.13_101329423_101446236_1	chrX	-	211	3	ISM	ENSMUSG00000067567.13	ENST00000647886.1	1758	12	102532	1118	29969	-1118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTGACCAGGGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	101446236	101329422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_101329482_101351244_101351351_101446190
ENSMUSG00000067567.13_101351244_101472442_1	chrX	-	557	5	ISM	ENSMUSG00000067567.13	ENST00000647980.1	1658	11	76311	22939	3763	-22939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCACCACCCTCCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	101472442	101351243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_101351351_101446190_101446286_101449142_101449316_101471720_101471830_101472369
ENSMUSG00000067567.13_101351269_101449243_1	chrX	-	278	3	ISM	ENSMUSG00000067567.13	ENST00000647980.1	1658	11	99510	22964	26962	-22964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAATCCTCAACTACATC	NA	NA	NA	NA	NA	NA	NA	NA	101449243	101351268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_101351351_101446190_101446286_101449142
ENSMUSG00000067567.13_101446191_101541880_1	chrX	-	634	5	ISM	ENSMUSG00000067567.13	ENST00000373583.6	1676	10	6906	117943	6817	12102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAGGCTCTGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	101541880	101446190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_101446286_101449142_101449316_101471720_101471830_101476090_101476204_101541736
ENSMUSG00000067567.13_101449142_101471832_1	chrX	-	286	2	ISM	ENSMUSG00000067567.13	ENST00000647980.1	1658	11	76921	120837	4373	9151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTACAGAGGAAAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	101471832	101449141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_101449316_101471720
ENSMUSG00000067567.13_101449253_101472442_1	chrX	-	245	3	ISM	ENSMUSG00000067567.13	ENST00000647980.1	1658	11	76311	120948	3763	9040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATTGCCGGAGATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	101472442	101449252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_101449316_101471720_101471830_101472369
ENSMUSG00000067567.13_101458293_101548687_1	chrX	-	1474	6	FSM	ENSMUSG00000067567.13	ENST00000648962.1	1484	6	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTTAAAAGTAATACTCT	NA	NA	NA	NA	NA	NA	NA	NA	101548687	101458292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_101459200_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ENSMUSG00000067567.13_101458885_101541880_1	chrX	-	459	2	ISM	ENSMUSG00000067567.13	ENST00000373560.7	779	5	6817	0	6817	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTCATTCACTTACTCG	NA	NA	NA	NA	NA	NA	NA	NA	101541880	101458884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_101459200_101541736
ENSMUSG00000067567.13_101459011_101476203_1	chrX	-	411	3	FSM	ENSMUSG00000067567.13	ENST00000373559.8	413	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCCCCTCCCTTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	101476203	101459010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_101459200_101471720_101471830_101476090
ENSMUSG00000067567.13_101459011_101543560_1	chrX	-	463	3	NNC	ENSMUSG00000067567.13	novel	779	5	NA	NA	5137	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCCCCTCCCTTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	101543560	101459010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_101459200_101541737_101541879_101543427
ENSMUSG00000067567.13_101459102_101548687_1	chrX	-	552	5	FSM	ENSMUSG00000067567.13	ENST00000373560.7	779	5	10	217	10	-91	multi-exon	FALSE	canonical	NA	NA	NA	NA	1888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCAGGTTTCTCATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	101548687	101459101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_101459200_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ENSMUSG00000067567.13_101471721_101543558_1	chrX	-	573	5	ISM	ENSMUSG00000067567.13	ENST00000647886.1	1758	12	5210	143416	5139	-12710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGCAGGAACACCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	101543558	101471720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427
ENSMUSG00000067567.13_101471801_101541789_1	chrX	-	267	4	ISM	ENSMUSG00000067567.13	ENST00000647980.1	1658	11	6964	143496	6908	-12790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAAGGACGGTACTACAG	NA	NA	NA	NA	NA	NA	NA	NA	101541789	101471800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_101471830_101472369_101472442_101476090_101476204_101541736
ENSMUSG00000067629.14_27160356_27171627_1	chr17	+	457	4	ISM	ENSMUSG00000067629.14	ENST00000628646.2	4082	19	-70	15233	0	-15233	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAATGAATGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	27160355	27171627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27160493_27163606_27163729_27165606_27165713_27171535
ENSMUSG00000067629.14_27171535_27179107_1	chr17	+	1821	9	ISM	ENSMUSG00000067629.14	ENST00000645250.1	4029	18	242	10728	242	-7753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGGAGGTCCCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	27171534	27179107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27171628_27172003_27172126_27173901_27174056_27174246_27174346_27175956_27176581_27176706_27176852_27177050_27177196_27178582_27178820_27178905
ENSMUSG00000067629.14_27172053_27179405_1	chr17	+	1768	9	ISM	ENSMUSG00000067629.14	ENSMUST00000231853.2	4256	15	193	10690	193	-7455	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCCAGAGTGAACGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	27172052	27179405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27172126_27173901_27174056_27174246_27174346_27175956_27176581_27176706_27176852_27177050_27177196_27178582_27178820_27178905_27179108_27179316
ENSMUSG00000067629.14_27176128_27180771_1	chr17	+	1765	8	ISM	ENSMUSG00000067629.14	ENSMUST00000231853.2	4256	15	4268	9324	4268	-6089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCTGGCATGCGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	27176127	27180771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27176581_27176706_27176852_27177050_27177196_27178582_27178820_27178905_27179108_27179316_27179496_27180042_27180085_27180409
ENSMUSG00000067629.14_27176434_27181108_1	chr17	+	1796	8	ISM	ENSMUSG00000067629.14	ENSMUST00000231853.2	4256	15	4574	8987	4574	-5752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCACTGATTTTACCC	NA	NA	NA	NA	NA	NA	NA	NA	27176433	27181108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27176581_27176706_27176852_27177050_27177196_27178582_27178820_27178905_27179108_27179316_27179496_27180042_27180085_27180409
ENSMUSG00000067629.14_27176800_27181320_1	chr17	+	1768	7	ISM	ENSMUSG00000067629.14	ENSMUST00000231853.2	4256	15	4940	8775	4940	-5540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTAGCGGGAACCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	27176799	27181320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27176852_27177050_27177196_27178582_27178820_27178905_27179108_27179316_27179496_27180042_27180085_27180409
ENSMUSG00000067629.14_27178973_27180506_1	chr17	+	411	3	ISM	ENSMUSG00000067629.14	ENST00000449372.7	3919	18	18555	9049	7113	-6354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCCCGGTCCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	27178972	27180506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27179108_27179316_27179496_27180409
ENSMUSG00000067629.14_27179369_27189556_1	chr17	+	1792	7	ISM	ENSMUSG00000067629.14	ENSMUST00000228963.2	4133	17	8076	351	7509	1	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCCCACCCCGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	27179368	27189556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_27179496_27180042_27180085_27180409_27181473_27181887_27182062_27183800_27184013_27185856_27185947_27189472
ENSMUSG00000067629.14_27180517_27189907_1	chr17	+	1834	6	NIC	ENSMUSG00000067629.14	novel	4133	17	NA	NA	8657	0	combination_of_known_junctions	FALSE	non_canonical	NA	NA	NA	NA	1036	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTCATAGTTCCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	27180516	27189907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_+_27181473_27181887_27182062_27183800_27184013_27185856_27185947_27189472_27189649_27189681
ENSMUSG00000067629.14_27183800_27190095_1	chr17	+	893	4	NIC	ENSMUSG00000067629.14	novel	5568	18	NA	NA	11940	0	combination_of_known_junctions	FALSE	non_canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGGGCCCTATTACCCC	NA	NA	NA	NA	NA	NA	NA	NA	27183799	27190095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_+_27184013_27185856_27185947_27189472_27189649_27189681
ENSMUSG00000067642.12_30402581_30404148_1	chr5	-	344	3	ISM	ENSMUSG00000067642.12	ENSMUST00000088117.11	3099	14	6572	4152	6572	-1345	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAACATCAGCGCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	30404148	30402580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30402614_30403360_30403538_30404014
ENSMUSG00000067642.12_30403454_30404475_1	chr5	-	361	3	ISM	ENSMUSG00000067642.12	ENSMUST00000088117.11	3099	14	6245	5025	6245	-2218	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTGACTTATGGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	30404475	30403453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30403538_30404014_30404212_30404395
ENSMUSG00000067642.12_30404463_30407299_1	chr5	-	347	3	ISM	ENSMUSG00000067642.12	ENSMUST00000088117.11	3099	14	3421	6034	3421	-3227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTACCCTTCAGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	30407299	30404462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30404540_30405437_30405645_30407236
ENSMUSG00000067642.12_30404515_30407352_1	chr5	-	348	3	ISM	ENSMUSG00000067642.12	ENSMUST00000088117.11	3099	14	3368	6086	3368	-3279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGCTTTGTGCTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	30407352	30404514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30404540_30405437_30405645_30407236
ENSMUSG00000067642.12_30405595_30408021_1	chr5	-	361	3	ISM	ENSMUSG00000067642.12	ENST00000311519.5	2548	8	17380	4359	2699	-4359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTGAAGGTGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	30408021	30405594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_30405645_30407236_30407481_30407954
ENSMUSG00000067713.8_98710678_98729402_1	chr15	-	1646	12	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	98729402	98710677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723605_98729306
ENSMUSG00000067713.8_98710678_98729402_2	chr15	-	1646	12	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	98729402	98710677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713235_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
ENSMUSG00000067713.8_98710678_98729402_3	chr15	-	1646	12	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	98729402	98710677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_98711362_98711477_98711625_98711892_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
ENSMUSG00000067713.8_98710678_98729402_5	chr15	-	1646	12	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	98729402	98710677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713616_98713756_98713867_98723568_98723615_98729310
ENSMUSG00000067780.4_17672125_17695995_1	chr1	+	1786	6	FSM	ENSMUSG00000067780.4	ENST00000649643.1	1785	6	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATATTTTCTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	17672124	17695995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_17672267_17672769_17673109_17690006_17690126_17691624_17691758_17691870_17691987_17695058
ENSMUSG00000067780.4_17672125_17695995_2	chr1	+	1778	6	NNC	ENSMUSG00000067780.4	novel	1785	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATATTTTCTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	17672124	17695995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_17672259_17672769_17673109_17690006_17690126_17691624_17691758_17691870_17691987_17695058
ENSMUSG00000067787.11_157399430_157408285_1	chr2	-	936	2	FSM	ENSMUSG00000067787.11	ENSMUST00000109528.9	2056	2	-28	1148	-4	-1148	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTCCCCGTTTTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	157408285	157399429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_157400248_157408167
ENSMUSG00000067813.4_13742373_13771671_1	chr1	+	1445	4	FSM	ENSMUSG00000067813.4	ENST00000520030.5	1465	4	20	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTATGTGTTGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	13742372	13771671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_13742509_13742591_13742989_13754279_13754499_13770978
ENSMUSG00000067813.4_13742373_13771774_1	chr1	+	1544	4	NNC	ENSMUSG00000067813.4	novel	1568	4	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTGCTGAGGATC	NA	NA	NA	NA	NA	NA	NA	NA	13742372	13771774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_13742509_13742595_13742989_13754279_13754499_13770978
ENSMUSG00000067813.4_13742373_13771774_2	chr1	+	1548	4	FSM	ENSMUSG00000067813.4	ENST00000408926.8	1568	4	20	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTGCTGAGGATC	NA	NA	NA	NA	NA	NA	NA	NA	13742372	13771774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_13742509_13742591_13742989_13754279_13754499_13770978
ENSMUSG00000067813.4_13742592_13771671_1	chr1	+	1311	3	ISM	ENSMUSG00000067813.4	ENSMUST00000088542.4	1926	4	3597	276	239	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTATGTGTTGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	13742591	13771671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_13742989_13754279_13754501_13770978
ENSMUSG00000067818.7_156617340_156620649_1	chr2	+	298	2	ISM	ENSMUSG00000067818.7	ENSMUST00000088552.7	1128	4	0	2929	0	-2432	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGGACGGGTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	156617339	156620649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156617427_156620438
ENSMUSG00000067818.7_156620437_156622454_1	chr2	+	261	2	NNC	ENSMUSG00000067818.7	novel	384	2	NA	NA	0	-627	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATCAACTTCACCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	156620436	156622454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_156620643_156622399
ENSMUSG00000067818.7_156620437_156622454_2	chr2	+	260	2	NNC	ENSMUSG00000067818.7	novel	384	2	NA	NA	0	-627	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATCAACTTCACCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	156620436	156622454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_156620649_156622406
ENSMUSG00000067818.7_156620437_156622454_3	chr2	+	265	2	ISM	ENSMUSG00000067818.7	ENSMUST00000088552.7	1128	4	3097	1124	0	-627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATCAACTTCACCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	156620436	156622454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_156620649_156622401
ENSMUSG00000067818.7_156622516_156623113_1	chr2	+	250	2	NNC	ENSMUSG00000067818.7	novel	1128	4	NA	NA	2079	32	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	702	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCAGTCACCTACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	156622515	156623113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_156622564_156622911
ENSMUSG00000067847.14_155985959_155987717_1	chr2	+	574	3	FSM	ENSMUSG00000067847.14	ENSMUST00000109598.4	362	3	-198	-14	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTATTTTTACCTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	155985958	155987717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_155986206_155986378_155986510_155987521
ENSMUSG00000067847.14_155985959_155987717_2	chr2	+	562	3	NNC	ENSMUSG00000067847.14	novel	569	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTATTTTTACCTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	155985958	155987717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_155986201_155986378_155986503_155987521
ENSMUSG00000067873.12_56098943_56111198_1	chrX	+	1497	10	FSM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	-32	1345	0	-1345	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGGCATTTGAAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	56098942	56111198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_56099126_56099313_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ENSMUSG00000067873.12_56099258_56111299_1	chrX	+	1471	9	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	283	1244	283	-1244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTGATGGGGACCACCC	NA	NA	NA	NA	NA	NA	NA	NA	56099257	56111299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ENSMUSG00000067873.12_56100856_56111634_1	chrX	+	1507	8	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	1881	909	1881	-909	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAATGGTGTTAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	56100855	56111634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ENSMUSG00000067873.12_56101404_56111739_1	chrX	+	1430	7	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	2429	804	2429	-804	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGAAGGTTCTGAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	56101403	56111739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ENSMUSG00000067873.12_56101906_56111861_1	chrX	+	1457	6	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	2931	682	2931	-682	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGATGATTCTGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	56101905	56111861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ENSMUSG00000067873.12_56104257_56111997_1	chrX	+	1473	5	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	5282	546	5282	-546	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACACAGATGGAAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	56104256	56111997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ENSMUSG00000067873.12_56104311_56112045_1	chrX	+	1467	5	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	5336	498	5336	-498	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAATTCCAATGAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	56104310	56112045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ENSMUSG00000067873.12_56105248_56112147_1	chrX	+	1436	4	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	6273	396	6273	-396	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTCTCAGTCCACAGACA	NA	NA	NA	NA	NA	NA	NA	NA	56105247	56112147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_56105314_56109476_56109567_56110365_56110504_56111005
ENSMUSG00000067873.12_56105285_56112213_1	chrX	+	1465	4	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	6310	330	6310	-330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTCCAGTTGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	56105284	56112213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_56105314_56109476_56109567_56110365_56110504_56111005
ENSMUSG00000067873.12_56109538_56112338_1	chrX	+	1500	3	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	10563	205	10563	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTCTCACCTGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	56109537	56112338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_56109567_56110365_56110504_56111005
ENSMUSG00000067882.15_23770047_23772540_1	chr17	-	611	5	NNC	ENSMUSG00000067882.15	novel	616	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	449	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGCAACCTCACCACTT	NA	NA	NA	NA	NA	NA	NA	NA	23772540	23770046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_23770156_23770981_23771085_23771535_23771605_23771964_23772075_23772320
ENSMUSG00000067882.15_23770047_23772540_2	chr17	-	610	5	NNC	ENSMUSG00000067882.15	novel	616	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGCAACCTCACCACTT	NA	NA	NA	NA	NA	NA	NA	NA	23772540	23770046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_23770147_23770980_23771085_23771535_23771605_23771964_23772082_23772320
ENSMUSG00000067882.15_23770047_23772540_3	chr17	-	612	5	NNC	ENSMUSG00000067882.15	novel	616	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGCAACCTCACCACTT	NA	NA	NA	NA	NA	NA	NA	NA	23772540	23770046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_23770156_23770980_23771085_23771542_23771605_23771964_23772082_23772320
ENSMUSG00000067882.15_23770047_23772540_4	chr17	-	618	5	NNC	ENSMUSG00000067882.15	novel	616	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	729	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGCAACCTCACCACTT	NA	NA	NA	NA	NA	NA	NA	NA	23772540	23770046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_23770156_23770981_23771085_23771535_23771605_23771964_23772082_23772320
ENSMUSG00000067889.8_4771482_4776662_1	chr19	+	631	6	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	370	25094	370	-25094	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAATGCTTTCAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	4771481	4776662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4771561_4774107_4774260_4774657_4774832_4775928_4776021_4776167_4776249_4776609
ENSMUSG00000067889.8_4774188_4781360_1	chr19	+	895	8	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	3076	20396	3076	-20396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACAACCAGAAGGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	4774187	4781360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4774260_4774657_4774832_4775928_4776021_4776167_4776249_4776609_4776726_4779089_4779203_4779329_4779518_4781301
ENSMUSG00000067889.8_4774809_4782112_1	chr19	+	890	8	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	3697	19644	3697	-19644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGACTCATGTTTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	4774808	4782112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4774832_4775928_4776021_4776167_4776249_4776609_4776726_4779089_4779203_4779329_4779518_4781301_4781420_4781953
ENSMUSG00000067889.8_4775955_4782487_1	chr19	+	913	8	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	4843	19269	4843	-19269	internal_fragment	TRUE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCCTACAGTGGCCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	4775954	4782487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4776021_4776167_4776249_4776609_4776726_4779089_4779203_4779329_4779518_4781301_4781420_4781953_4782113_4782415
ENSMUSG00000067889.8_4779132_4783770_1	chr19	+	928	6	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	8020	17986	8020	-17986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCAGGCTGAGAGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	4779131	4783770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4779203_4779329_4779518_4781301_4781420_4781953_4782113_4782415_4782719_4783681
ENSMUSG00000067889.8_4779416_4782674_1	chr19	+	638	4	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	8304	19082	8304	-19082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGACCTGCTCTACCTC	NA	NA	NA	NA	NA	NA	NA	NA	4779415	4782674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4779518_4781301_4781420_4781953_4782113_4782415
ENSMUSG00000067889.8_4779464_4784168_1	chr19	+	890	6	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	8352	17588	8352	-17588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGAGTCACGTCGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	4779463	4784168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4779518_4781301_4781420_4781953_4782113_4782415_4782719_4783681_4783836_4784066
ENSMUSG00000067889.8_4781335_4784273_1	chr19	+	908	5	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	10223	17483	10223	-17483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGACTGGTGTCCTTCGC	NA	NA	NA	NA	NA	NA	NA	NA	4781334	4784273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4781420_4781953_4782113_4782415_4782719_4783681_4783836_4784066
ENSMUSG00000067889.8_4783720_4784842_1	chr19	+	892	2	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	12608	16914	12608	-16914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCCTGTGGCCTCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	4783719	4784842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4783836_4784066
ENSMUSG00000067889.8_4783731_4784622_1	chr19	+	661	2	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	12619	17134	12619	-17134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGGGCCCTTGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	4783730	4784622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4783836_4784066
ENSMUSG00000067889.8_4783792_4784666_1	chr19	+	644	2	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	12680	17090	12680	-17090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGCCCTGAGGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	4783791	4784666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4783836_4784066
ENSMUSG00000067889.8_4784340_4787411_1	chr19	+	640	2	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	13228	14345	13228	-14345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTACTGCTGTCAATGACA	NA	NA	NA	NA	NA	NA	NA	NA	4784339	4787411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4784938_4787369
ENSMUSG00000067889.8_4784403_4787455_1	chr19	+	621	2	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	13291	14301	13291	-14301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCACCAGGCAAGGACCGC	NA	NA	NA	NA	NA	NA	NA	NA	4784402	4787455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4784938_4787369
ENSMUSG00000067889.8_4784455_4787504_1	chr19	+	618	2	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	13343	14252	13343	-14252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGGGAGGCAGCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	4784454	4787504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4784938_4787369
ENSMUSG00000067889.8_4784577_4787973_1	chr19	+	634	3	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	13465	13783	13465	-13783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGCCTGGGCAATGATC	NA	NA	NA	NA	NA	NA	NA	NA	4784576	4787973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4784938_4787369_4787508_4787838
ENSMUSG00000067889.8_4784652_4788039_1	chr19	+	625	3	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	13540	13717	13540	-13717	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGGAAGCTATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	4784651	4788039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4784938_4787369_4787508_4787838
ENSMUSG00000067889.8_4784829_4788233_1	chr19	+	642	3	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	13717	13523	13717	-13523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCAGCTTGGATGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	4784828	4788233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4784938_4787369_4787508_4787838
ENSMUSG00000067889.8_4787444_4789200_1	chr19	+	887	3	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	16332	12556	16332	-12556	internal_fragment	TRUE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGACTTCATGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	4787443	4789200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4787508_4787838_4788596_4789134
ENSMUSG00000067889.8_4788093_4789998_1	chr19	+	915	4	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	16981	11758	16981	-11758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGACTGGCTGGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	4788092	4789998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4788596_4789134_4789338_4789618_4789710_4789880
ENSMUSG00000067889.8_4788232_4792452_1	chr19	+	897	5	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	17120	9304	17120	-9304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCACTACCCAAGCCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	4788231	4792452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360
ENSMUSG00000067889.8_4788514_4794190_1	chr19	+	902	6	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	17402	7566	17402	-7566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGAGGAGAAGTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	4788513	4794190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075
ENSMUSG00000067889.8_4789879_4795402_1	chr19	+	994	5	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	18767	6354	18767	-6354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGAGCAATGGCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	4789878	4795402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136
ENSMUSG00000067889.8_4792401_4795240_1	chr19	+	643	4	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	21289	6516	21289	-6516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGAAATGTGGAAACGCC	NA	NA	NA	NA	NA	NA	NA	NA	4792400	4795240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4792625_4794075_4794301_4794493_4794584_4795136
ENSMUSG00000067889.8_4792496_4795872_1	chr19	+	901	6	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	21384	5884	21384	-5884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGCGGCGCGAGCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4792495	4795872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807
ENSMUSG00000067889.8_4794175_4796682_1	chr19	+	902	6	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	23063	5074	23063	-5074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGCTGGGGGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	4794174	4796682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593
ENSMUSG00000067889.8_4794228_4796743_1	chr19	+	910	6	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	23116	5013	23116	-5013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCCTGGGCTGACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	4794227	4796743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593
ENSMUSG00000067889.8_4795226_4796730_1	chr19	+	645	4	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	24114	5026	24114	-5026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGTCTCAATGAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	4795225	4796730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4795398_4795485_4795617_4795807_4796013_4796593
ENSMUSG00000067889.8_4795292_4797804_1	chr19	+	882	5	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	24180	3952	24180	-3952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGCCGTCACATGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	4795291	4797804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739
ENSMUSG00000067889.8_4795325_4797882_1	chr19	+	927	5	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	24213	3874	24213	-3874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGATACCACGGACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	4795324	4797882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739
ENSMUSG00000067889.8_4795806_4798225_1	chr19	+	966	4	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	24694	3531	24694	-3531	internal_fragment	TRUE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGCAAGACCTGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	4795805	4798225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4796013_4796593_4796969_4797739_4797985_4798086
ENSMUSG00000067889.8_4795838_4797838_1	chr19	+	649	3	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	24726	3918	24726	-3918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCCAGCTCCAGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	4795837	4797838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4796013_4796593_4796969_4797739
ENSMUSG00000067889.8_4796824_4799520_1	chr19	+	902	6	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	25712	2236	25712	-2236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGGGAGTCTGGTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	4796823	4799520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429
ENSMUSG00000067889.8_4797847_4800112_1	chr19	+	893	8	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	26735	1644	26735	-1644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCCTTCTCCAATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	4797846	4800112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048
ENSMUSG00000067889.8_4797882_4800180_1	chr19	+	926	8	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	26770	1576	26770	-1576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTGAGCTCTCTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	4797881	4800180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048
ENSMUSG00000067889.8_4798620_4800682_1	chr19	+	949	7	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	27508	1074	27508	-1074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTACCTGGGCTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	4798619	4800682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508
ENSMUSG00000067889.8_4799070_4801603_1	chr19	+	876	8	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	27958	153	27958	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCAGTGGTGCCCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	4799069	4801603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
ENSMUSG00000067916.10_147261225_147263819_1	chr4	+	1144	2	ISM	ENSMUSG00000067916.10	ENSMUST00000084149.10	2813	7	44730	1217	44730	-1217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAATTCATACAGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	147261224	147263819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_147261331_147262781
ENSMUSG00000067995.5_76134532_76144366_1	chr14	-	706	2	ISM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	103939	155	103939	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAAGGTGGGAGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	76144366	76134531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_76135094_76144222
ENSMUSG00000067995.5_76134766_76186959_1	chr14	-	654	4	ISM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	61346	389	61346	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGCATGCTGGCACATGA	NA	NA	NA	NA	NA	NA	NA	NA	76186959	76134765	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877
ENSMUSG00000067995.5_76134989_76245218_1	chr14	-	669	7	ISM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	3087	612	3087	-612	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGAGCGACTGAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	76245218	76134988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234348_76234368_76245144
ENSMUSG00000067995.5_76144274_76248305_1	chr14	-	699	7	ISM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	0	9897	0	-9897	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAGTACTATAATCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	76248305	76144273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234348_76234368_76245144_76245219_76248119
ENSMUSG00000068015.9_74994419_75095521_1	chr14	-	1786	18	ISM	ENSMUSG00000068015.9	ENSMUST00000228252.2	3125	19	89795	806	-52023	-806	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCTCCTGGCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	75095521	74994418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416
ENSMUSG00000068039.14_13135329_13143444_1	chr17	+	1790	11	FSM	ENSMUSG00000068039.14	ENSMUST00000089024.13	1902	11	113	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGGGTTCCTGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	13135328	13143444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_13135517_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000068039.14_13135362_13142128_1	chr17	+	1212	10	ISM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	93	1826	33	-1315	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATCTTACGAGGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	13135361	13142128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104
ENSMUSG00000068039.14_13135362_13142153_1	chr17	+	1237	10	ISM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	93	1801	33	-1290	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGTGTGATGAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	13135361	13142153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104
ENSMUSG00000068039.14_13135500_13142228_1	chr17	+	1174	10	ISM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	231	1726	171	-1215	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCCCAGGTGGAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	13135499	13142228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104
ENSMUSG00000068039.14_13140988_13143621_1	chr17	+	1134	5	ISM	ENSMUSG00000068039.14	ENSMUST00000089024.13	1902	11	5772	-178	5659	178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTCTCCAGGGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	13140987	13143621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000068039.14_13141039_13143671_1	chr17	+	1133	5	ISM	ENSMUSG00000068039.14	ENSMUST00000089024.13	1902	11	5823	-228	5710	228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCAGAGGATGGCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	13141038	13143671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000068039.14_13141095_13143717_1	chr17	+	1123	5	ISM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	5826	237	5766	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAGAGAAGAAGAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	13141094	13143717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000068039.14_13141531_13143833_1	chr17	+	1133	4	ISM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	6262	121	6202	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAATAGGCCTATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	13141530	13143833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000068039.14_13142105_13143954_1	chr17	+	1165	3	ISM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	6836	0	6776	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCCAAGTGCTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	13142104	13143954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_13142298_13142416_13142581_13143146
ENSMUSG00000068040.11_153003223_153050990_1	chr2	+	2500	18	FSM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	0	1396	0	-1396	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGGTTTTGGGGTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	153003222	153050990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ENSMUSG00000068040.11_153003461_153051090_1	chr2	+	2362	18	FSM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	238	1296	238	-1296	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCATCGGCTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	153003460	153051090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ENSMUSG00000068040.11_153020901_153051303_1	chr2	+	2452	17	ISM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	17678	1083	17678	-1083	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCTGGTTCCCTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	153020900	153051303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ENSMUSG00000068040.11_153029182_153051482_1	chr2	+	2510	15	ISM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	25959	904	25959	-904	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTAGGGTGCTCACCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	153029181	153051482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ENSMUSG00000068040.11_153029488_153051637_1	chr2	+	2458	14	ISM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	26265	749	26265	-749	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTCACAGCCCTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	153029487	153051637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ENSMUSG00000068040.11_153030956_153051822_1	chr2	+	2465	13	ISM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	27733	564	27733	-564	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGAGGATCATGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	153030955	153051822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ENSMUSG00000068040.11_153036261_153052195_1	chr2	+	2430	9	ISM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	33038	191	33038	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAAATCTTGCACCC	NA	NA	NA	NA	NA	NA	NA	NA	153036260	153052195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ENSMUSG00000068040.11_153036261_153052253_1	chr2	+	2488	9	ISM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	33038	133	33038	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTTCAAACATTGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	153036260	153052253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ENSMUSG00000068040.11_153037266_153052386_1	chr2	+	2517	8	ISM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	34043	0	34043	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGGGTGCGGATTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	153037265	153052386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ENSMUSG00000068101.12_82117980_82128874_1	chr15	-	1121	6	NNC	ENSMUSG00000068101.12	novel	1202	6	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	82128874	82117979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128829
ENSMUSG00000068114.8_82015730_82018913_1	chr15	+	234	3	ISM	ENSMUSG00000068114.8	ENSMUST00000089174.6	2046	7	3607	7491	3607	-7491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGACAGGCGTCTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	82015729	82018913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_82015747_82015945_82016031_82018781
ENSMUSG00000068134.14_149956856_149961829_1	chr2	-	3414	3	ISM	ENSMUSG00000068134.14	ENSMUST00000089207.13	4127	4	16799	530	16733	-530	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAATTTGAGCTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	149961829	149956855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_149960121_149961484_149961549_149961744
ENSMUSG00000068134.14_149957010_149978606_1	chr2	-	3421	4	FSM	ENSMUSG00000068134.14	ENSMUST00000089207.13	4127	4	22	684	-8	-684	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCATTTAGCATACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	149978606	149957009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_149960121_149961484_149961549_149961744_149961872_149978487
ENSMUSG00000068184.8_108189305_108295125_1	chr13	-	464	4	FSM	ENSMUSG00000068184.8	ENSMUST00000163558.3	678	4	32	182	0	-133	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGGCAAGACTTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	108295125	108189304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_108189489_108217886_108217928_108228067_108228158_108294976
ENSMUSG00000068184.8_108189354_108295134_1	chr13	-	424	4	FSM	ENSMUSG00000068184.8	ENSMUST00000163558.3	678	4	23	231	-9	-182	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCCCGTATTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	108295134	108189353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_108189489_108217886_108217928_108228067_108228158_108294976
ENSMUSG00000068196.6_57448462_57452775_1	chr16	-	818	2	FSM	ENSMUSG00000068196.6	ENST00000273342.8	2678	2	229	1631	229	-1631	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTCGGAAAGCCAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	57452775	57448461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_57449178_57452673
ENSMUSG00000068196.6_57448583_57452775_1	chr16	-	697	2	FSM	ENSMUSG00000068196.6	ENST00000273342.8	2678	2	229	1752	229	-1752	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTGGGATGCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	57452775	57448582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_57449178_57452673
ENSMUSG00000068205.15_140237515_140264875_1	chr2	+	3393	4	FSM	ENSMUSG00000068205.15	ENSMUST00000043836.8	3552	4	160	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTATTATTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	140237514	140264875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_140237642_140242781_140242899_140260736_140260835_140261824
ENSMUSG00000068206.14_79113373_79132407_1	chr15	+	1248	12	ISM	ENSMUSG00000068206.14	ENST00000404072.7	1694	13	-73	943	0	-943	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGCTGCCGCCAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	79113372	79132407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_79113674_79113955_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351
ENSMUSG00000068206.14_79113616_79132979_1	chr15	+	1153	13	FSM	ENSMUSG00000068206.14	ENST00000404072.7	1694	13	170	371	34	-371	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTATGCAGTGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	79113615	79132979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_79113674_79113955_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ENSMUSG00000068206.14_79113616_79133183_1	chr15	+	1460	13	FSM	ENSMUSG00000068206.14	ENSMUST00000018295.14	1977	13	34	483	34	-167	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTGAGTGCCCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	79113615	79133183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ENSMUSG00000068206.14_79113902_79133350_1	chr15	+	1520	12	FSM	ENSMUSG00000068206.14	ENSMUST00000166155.2	1699	12	0	179	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTGCAGCCTGAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	79113901	79133350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ENSMUSG00000068206.14_79123781_79133529_1	chr15	+	1438	10	ISM	ENSMUSG00000068206.14	ENSMUST00000166155.2	1699	12	9879	0	9879	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCTGGGGCCAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	79123780	79133529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ENSMUSG00000068206.14_79125425_79133666_1	chr15	+	1445	9	ISM	ENSMUSG00000068206.14	ENSMUST00000166155.2	1699	12	11523	-137	11523	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGGCTCCTTGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	79125424	79133666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ENSMUSG00000068246.7_77618662_77620364_1	chr15	+	1205	2	ISM	ENSMUSG00000068246.7	ENSMUST00000109775.4	1573	3	5368	218	5368	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCAGTTAAGAGAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	77618661	77620364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_77618791_77619288
ENSMUSG00000068250.14_149058645_149072486_1	chr6	-	1010	4	ISM	ENSMUSG00000068250.14	ENSMUST00000111535.8	1457	7	17724	0	17637	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTTGGGGGGGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	149072486	149058644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330
ENSMUSG00000068250.14_149058765_149086524_1	chr6	-	1132	6	ISM	ENSMUSG00000068250.14	ENSMUST00000111535.8	1457	7	3686	120	3599	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATTTATTGTAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	149086524	149058764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489
ENSMUSG00000068250.14_149058917_149086580_1	chr6	-	1036	6	ISM	ENSMUSG00000068250.14	ENSMUST00000095319.10	1369	7	3603	-159	3543	159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAATCTGCCTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	149086580	149058916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489
ENSMUSG00000068250.14_149059075_149090162_1	chr6	-	979	7	FSM	ENSMUSG00000068250.14	ENSMUST00000111535.8	1457	7	48	430	21	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCCCATATTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	149090162	149059074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149090103
ENSMUSG00000068250.14_149059250_149085036_2	chr6	-	612	5	ISM	ENSMUSG00000068250.14	ENST00000541931.5	631	6	5087	-1	5087	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGGCTGATCTCAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	149085036	149059249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891
ENSMUSG00000068250.14_149059250_149090162_1	chr6	-	671	6	FSM	ENSMUSG00000068250.14	ENST00000541931.5	631	6	-39	-1	21	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGGCTGATCTCAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	149090162	149059249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149090103
ENSMUSG00000068250.14_149072372_149089864_1	chr6	-	586	4	ISM	ENSMUSG00000068250.14	ENSMUST00000095319.10	1369	7	319	13296	259	-13121	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCATTTCTGCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	149089864	149072371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_149072549_149084891_149085037_149086489_149086623_149089733
ENSMUSG00000068250.14_149084956_149090162_1	chr6	-	643	3	ISM	ENSMUSG00000068250.14	ENSMUST00000095319.10	1369	7	21	25880	21	-25705	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAACTGAAGGCACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	149090162	149084955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_149085037_149086489_149086623_149089733
ENSMUSG00000068263.12_87708096_87709762_1	chr6	+	534	2	ISM	ENSMUSG00000068263.12	ENST00000436022.2	1499	7	224	20997	221	-20997	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGGACAGGTGGAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	87708095	87709762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87708523_87709655
ENSMUSG00000068263.12_87708149_87709821_1	chr6	+	540	2	ISM	ENSMUSG00000068263.12	ENST00000436022.2	1499	7	277	20938	274	-20938	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCACCGAGTGCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	87708148	87709821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87708523_87709655
ENSMUSG00000068263.12_87708391_87727619_1	chr6	+	555	4	ISM	ENSMUSG00000068263.12	ENST00000436022.2	1499	7	519	3140	516	-3140	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGCTCCGTGGAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	87708390	87727619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87708523_87709655_87709919_87726113_87726260_87727605
ENSMUSG00000068263.12_87708458_87727658_1	chr6	+	527	4	ISM	ENSMUSG00000068263.12	ENST00000436022.2	1499	7	586	3101	583	-3101	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGAAAGGTGGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	87708457	87727658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87708523_87709655_87709919_87726113_87726260_87727605
ENSMUSG00000068263.12_87709791_87730056_1	chr6	+	565	5	ISM	ENSMUSG00000068263.12	ENST00000436022.2	1499	7	1919	703	1916	-703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATCTGAGGCTAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	87709790	87730056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87709919_87726113_87726260_87727605_87727705_87728722_87728888_87730029
ENSMUSG00000068263.12_87709791_87730089_1	chr6	+	598	5	ISM	ENSMUSG00000068263.12	ENST00000436022.2	1499	7	1919	670	1916	-670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGAGGGTCCGGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	87709790	87730089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87709919_87726113_87726260_87727605_87727705_87728722_87728888_87730029
ENSMUSG00000068263.12_87726110_87730760_1	chr6	+	590	5	ISM	ENSMUSG00000068263.12	ENST00000436022.2	1499	7	18238	-1	18235	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTGGACCGGAACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	87726109	87730760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_87726260_87727605_87727705_87728722_87728888_87730029_87730168_87730722
ENSMUSG00000068264.12_131052360_131054784_1	chr2	+	871	3	FSM	ENSMUSG00000068264.12	ENSMUST00000110208.8	1521	3	0	650	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGCTGACCCCTCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	131052359	131054784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_131052602_131053182_131053394_131054366
ENSMUSG00000068264.12_131052524_131054922_1	chr2	+	845	3	FSM	ENSMUSG00000068264.12	ENSMUST00000110208.8	1521	3	164	512	0	138	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGGAAGGGACCTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	131052523	131054922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_131052602_131053182_131053394_131054366
ENSMUSG00000068284.15_43993760_44046933_1	chr16	+	984	7	FSM	ENSMUSG00000068284.15	ENST00000491165.5	2027	7	151	892	0	-892	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTGGATGAATGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	43993759	44046933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_43993874_44019266_44019385_44020976_44021042_44022100_44022130_44025360_44025444_44033002_44033100_44046455
ENSMUSG00000068284.15_44020976_44047095_1	chr16	+	915	5	ISM	ENSMUSG00000068284.15	ENST00000491165.5	2027	7	27367	730	27216	-730	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCTCACGTTTGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	44020975	44047095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_44021042_44022100_44022130_44025360_44025444_44033002_44033100_44046455
ENSMUSG00000068284.15_44025417_44047269_1	chr16	+	938	3	ISM	ENSMUSG00000068284.15	ENST00000491165.5	2027	7	31808	556	31657	-556	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACTGTGAAGGAAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	44025416	44047269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_44025444_44033002_44033100_44046455
ENSMUSG00000068290.12_130496211_130503677_1	chr2	-	321	6	ISM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	2902	331	2902	-331	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACCCCAGAGGAACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	130503677	130496210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656
ENSMUSG00000068290.12_130500606_130504109_1	chr2	-	241	3	ISM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	2470	4726	2470	-4726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCAGGCCCGGCGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	130504109	130500605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130500632_130503656_130503759_130503996
ENSMUSG00000068290.12_130500606_130505304_1	chr2	-	283	4	NNC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	1275	-4726	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCAGGCCCGGCGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	130505304	130500605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_130500632_130503656_130503753_130503985_130504110_130505267
ENSMUSG00000068290.12_130503656_130505398_1	chr2	-	352	3	NNC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	1181	-7776	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGACCCTGGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	130505398	130503655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_130503753_130503985_130504110_130505267
ENSMUSG00000068290.12_130503656_130505398_2	chr2	-	347	3	ISM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	1181	7776	1181	-7776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGACCCTGGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	130505398	130503655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130503759_130503996_130504110_130505267
ENSMUSG00000068290.12_130504072_130506436_1	chr2	-	287	3	ISM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	143	8192	143	-8192	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCAACAGGGAAAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	130506436	130504071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130504110_130505267_130505475_130506394
ENSMUSG00000068323.13_83217678_83249057_1	chr6	+	1306	11	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	88	28463	88	-28430	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCAGCTTGTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	83217677	83249057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83217722_83237416_83237578_83238392_83238546_83239454_83239551_83240497_83240554_83241244_83241403_83242654_83242743_83244387_83244543_83245175_83245365_83247904_83248080_83249026
ENSMUSG00000068323.13_83217701_83249160_1	chr6	+	1386	11	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	111	28360	111	-28327	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTACCACATGGCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	83217700	83249160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83217722_83237416_83237578_83238392_83238546_83239454_83239551_83240497_83240554_83241244_83241403_83242654_83242743_83244387_83244543_83245175_83245365_83247904_83248080_83249026
ENSMUSG00000068323.13_83237532_83250090_1	chr6	+	1309	11	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	19942	27430	19942	-27397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCTTATTCTGGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	83237531	83250090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83237578_83238392_83238546_83239454_83239551_83240497_83240554_83241244_83241403_83242654_83242743_83244387_83244543_83245175_83245365_83247904_83248080_83249026_83249161_83250031
ENSMUSG00000068323.13_83239455_83254553_1	chr6	+	1382	10	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	21865	22967	21865	-22934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCTCTTCCTTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	83239454	83254553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83239551_83240497_83240554_83241244_83241403_83242654_83242743_83244387_83244543_83245175_83245365_83247904_83248080_83249026_83249161_83250031_83250304_83254494
ENSMUSG00000068323.13_83240498_83256973_1	chr6	+	1314	10	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	22908	20547	22908	-20514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTCCCTGCTGAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	83240497	83256973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83240554_83241244_83241403_83242654_83242743_83244387_83244543_83245175_83245365_83247904_83248080_83249026_83249161_83250031_83250304_83254494_83254554_83256945
ENSMUSG00000068323.13_83241284_83257074_1	chr6	+	1320	9	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	23694	20446	23694	-20413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGGGACTTACTC	NA	NA	NA	NA	NA	NA	NA	NA	83241283	83257074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83241403_83242654_83242743_83244387_83244543_83245175_83245365_83247904_83248080_83249026_83249161_83250031_83250304_83254494_83254554_83256945
ENSMUSG00000068323.13_83241328_83257132_1	chr6	+	1334	9	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	23738	20388	23738	-20355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCCCACCAAGGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	83241327	83257132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83241403_83242654_83242743_83244387_83244543_83245175_83245365_83247904_83248080_83249026_83249161_83250031_83250304_83254494_83254554_83256945
ENSMUSG00000068323.13_83242697_83265433_1	chr6	+	1393	9	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	25107	12087	25107	-12054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCTGAGCCTCGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	83242696	83265433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83242743_83244387_83244543_83245175_83245365_83247904_83248080_83249026_83249161_83250031_83250304_83254494_83254554_83256945_83257147_83265271
ENSMUSG00000068323.13_83244399_83266146_1	chr6	+	1354	9	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	26809	11374	26809	-11341	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACCTGTTCTGGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	83244398	83266146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83244543_83245175_83245365_83247904_83248080_83249026_83249161_83250031_83250304_83254494_83254554_83256945_83257147_83265271_83265434_83266128
ENSMUSG00000068323.13_83244475_83266185_1	chr6	+	1317	9	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	26885	11335	26885	-11302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCACCGGGCTCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	83244474	83266185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83244543_83245175_83245365_83247904_83248080_83249026_83249161_83250031_83250304_83254494_83254554_83256945_83257147_83265271_83265434_83266128
ENSMUSG00000068323.13_83245174_83266308_1	chr6	+	1374	8	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	27584	11212	27584	-11179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGGGAGCAAGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	83245173	83266308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83245365_83247904_83248080_83249026_83249161_83250031_83250304_83254494_83254554_83256945_83257147_83265271_83265434_83266128
ENSMUSG00000068323.13_83245287_83272868_1	chr6	+	1349	10	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	27697	4652	27697	-4619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTATGGAGTCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	83245286	83272868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83245365_83247904_83248080_83249026_83249161_83250031_83250304_83254494_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852
ENSMUSG00000068323.13_83247932_83273589_1	chr6	+	1333	10	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	30342	3931	30342	-3898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACCAGCCGGACCACGC	NA	NA	NA	NA	NA	NA	NA	NA	83247931	83273589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83248080_83249026_83249161_83250031_83250304_83254494_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553
ENSMUSG00000068323.13_83248001_83273727_1	chr6	+	1402	10	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	30411	3793	30411	-3760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGGGTGCAGCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	83248000	83273727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83248080_83249026_83249161_83250031_83250304_83254494_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553
ENSMUSG00000068323.13_83248048_83273727_1	chr6	+	1355	10	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	30458	3793	30458	-3760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGGGTGCAGCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	83248047	83273727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83248080_83249026_83249161_83250031_83250304_83254494_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553
ENSMUSG00000068323.13_83249111_83274273_1	chr6	+	1312	10	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	31521	3247	31521	-3214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCCTCCCAGAGAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	83249110	83274273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83249161_83250031_83250304_83254494_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200
ENSMUSG00000068323.13_83250191_83277504_1	chr6	+	1323	11	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	32601	16	32601	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAACTGGATCGAAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	83250190	83277504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83250304_83254494_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274357_83276407_83276493_83277452
ENSMUSG00000068323.13_83250278_83277520_1	chr6	+	1252	11	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	32688	0	32688	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGGCTATCTCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	83250277	83277520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83250304_83254494_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274357_83276407_83276493_83277452
ENSMUSG00000068327.6_83045305_83046773_1	chr6	-	1081	2	FSM	ENSMUSG00000068327.6	ENSMUST00000174674.3	1514	2	433	0	433	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCAGTCTCCAGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	83046773	83045304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_83046273_83046660
ENSMUSG00000068327.6_83045572_83046983_1	chr6	-	1024	2	FSM	ENSMUSG00000068327.6	ENSMUST00000174674.3	1514	2	223	267	223	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAACCCCGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	83046983	83045571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_83046273_83046660
ENSMUSG00000068327.6_83045572_83047049_1	chr6	-	1090	2	FSM	ENSMUSG00000068327.6	ENSMUST00000174674.3	1514	2	157	267	157	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAACCCCGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	83047049	83045571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_83046273_83046660
ENSMUSG00000068328.10_83031502_83033420_1	chr6	+	1005	7	ISM	ENSMUSG00000068328.10	ENSMUST00000092618.9	1769	12	0	1369	0	-1369	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAACAGGGGTGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	83031501	83033420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348
ENSMUSG00000068328.10_83031502_83033625_1	chr6	+	1103	8	ISM	ENSMUSG00000068328.10	ENSMUST00000092618.9	1769	12	0	1164	0	-1164	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGATCTGGGCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	83031501	83033625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522
ENSMUSG00000068328.10_83031627_83033625_1	chr6	+	978	8	ISM	ENSMUSG00000068328.10	ENSMUST00000092618.9	1769	12	125	1164	125	-1164	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGATCTGGGCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	83031626	83033625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522
ENSMUSG00000068328.10_83031627_83033859_1	chr6	+	1098	9	ISM	ENSMUSG00000068328.10	ENSMUST00000092618.9	1769	12	125	930	125	-930	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1013	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGGAAAGGGTAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	83031626	83033859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739
ENSMUSG00000068328.10_83031736_83033987_1	chr6	+	1018	10	ISM	ENSMUSG00000068328.10	ENSMUST00000092618.9	1769	12	234	802	234	-802	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCTGCTCGAGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	83031735	83033987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958
ENSMUSG00000068328.10_83031978_83034374_1	chr6	+	1059	10	ISM	ENSMUSG00000068328.10	ENSMUST00000092618.9	1769	12	476	415	476	-415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGAGGGTTAGAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	83031977	83034374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256
ENSMUSG00000068328.10_83032208_83034523_1	chr6	+	950	10	NNC	ENSMUSG00000068328.10	novel	1769	12	NA	NA	706	-266	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGGATGGTACCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	83032207	83034523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033744_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068328.10_83032487_83034659_1	chr6	+	1038	9	ISM	ENSMUSG00000068328.10	ENSMUST00000092618.9	1769	12	985	130	985	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTCTGTTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83032486	83034659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068328.10_83032487_83034659_2	chr6	+	1033	9	NNC	ENSMUSG00000068328.10	novel	1769	12	NA	NA	985	-130	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTCTGTTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83032486	83034659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_83032672_83032878_83032952_83033047_83033117_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068328.10_83032877_83034789_1	chr6	+	985	8	ISM	ENSMUSG00000068328.10	ENSMUST00000092618.9	1769	12	1375	0	1375	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGGATCCCAGCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	83032876	83034789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068328.10_83032877_83034789_2	chr6	+	980	8	NNC	ENSMUSG00000068328.10	novel	1769	12	NA	NA	1375	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGGATCCCAGCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	83032876	83034789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033744_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068329.13_83028247_83031148_1	chr6	-	1321	8	FSM	ENSMUSG00000068329.13	ENSMUST00000089645.13	1725	8	404	0	275	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGGTTGGATCTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	83031148	83028246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83030901
ENSMUSG00000068329.13_83028247_83031148_2	chr6	-	1313	7	NNC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	275	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGGTTGGATCTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	83031148	83028246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029810_83030309_83030505_83030593_83030799_83030901
ENSMUSG00000068329.13_83028730_83031423_1	chr6	-	1220	7	ISM	ENSMUSG00000068329.13	ENSMUST00000089645.13	1725	8	129	483	0	-483	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAGGTGATGGGGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	83031423	83028729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83030901
ENSMUSG00000068329.13_83028730_83031552_1	chr6	-	1349	7	ISM	ENSMUSG00000068329.13	ENSMUST00000089645.13	1725	8	0	483	0	-483	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAGGTGATGGGGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	83031552	83028729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83030901
ENSMUSG00000068335.7_83008514_83009609_1	chr6	-	807	3	ISM	ENSMUSG00000068335.7	ENSMUST00000089651.6	1807	5	843	599	843	-599	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCGGCTGAAGGAAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	83009609	83008513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_83009042_83009211_83009397_83009515
ENSMUSG00000068391.9_72962394_72965387_1	chr15	+	181	3	FSM	ENSMUSG00000068391.9	ENSMUST00000089765.9	871	3	153	537	153	-537	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTTAGCTAGTAAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	72962393	72965387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_72962433_72964681_72964809_72965372
ENSMUSG00000068391.9_72964686_72965393_1	chr15	+	144	2	ISM	ENSMUSG00000068391.9	ENSMUST00000089765.9	871	3	2445	531	2445	-531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCTAGTAAGTACCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	72964685	72965393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_72964809_72965372
ENSMUSG00000068391.9_72964727_72965453_1	chr15	+	163	2	ISM	ENSMUSG00000068391.9	ENSMUST00000089765.9	871	3	2486	471	2486	-471	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATGGAAGCGACCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	72964726	72965453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_72964809_72965372
ENSMUSG00000068391.9_72964785_72965499_1	chr15	+	151	2	ISM	ENSMUSG00000068391.9	ENSMUST00000089765.9	871	3	2544	425	2544	-425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCTCATCCTGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	72964784	72965499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_72964809_72965372
ENSMUSG00000068452.9_122110983_122121142_1	chr2	-	2305	17	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	7146	80	7146	-80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTGCCAGCTCATCAAC	NA	NA	NA	NA	NA	NA	NA	NA	122121142	122110982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122111041_122111171_122111301_122111394_122111551_122111852_122112012_122112197_122112431_122113541_122113696_122113930_122114059_122114329_122114380_122115053_122115154_122115228_122115460_122115641_122115821_122116505_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076
ENSMUSG00000068452.9_122111426_122121652_1	chr2	-	2315	16	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	6636	523	6636	-523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAGTTCGACCTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	122121652	122111425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122111551_122111852_122112012_122112197_122112431_122113541_122113696_122113930_122114059_122114329_122114380_122115053_122115154_122115228_122115460_122115641_122115821_122116505_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076_122121263_122121544
ENSMUSG00000068452.9_122111489_122121697_1	chr2	-	2297	16	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	6591	586	6591	-586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTGGAGGAGAATGACT	NA	NA	NA	NA	NA	NA	NA	NA	122121697	122111488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122111551_122111852_122112012_122112197_122112431_122113541_122113696_122113930_122114059_122114329_122114380_122115053_122115154_122115228_122115460_122115641_122115821_122116505_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076_122121263_122121544
ENSMUSG00000068452.9_122111538_122121749_1	chr2	-	2300	16	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	6539	635	6539	-635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGACAAGGACTCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	122121749	122111537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122111551_122111852_122112012_122112197_122112431_122113541_122113696_122113930_122114059_122114329_122114380_122115053_122115154_122115228_122115460_122115641_122115821_122116505_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076_122121263_122121544
ENSMUSG00000068452.9_122111853_122122037_1	chr2	-	2401	16	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	6251	950	6251	-950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATCCTTTCTCCACT	NA	NA	NA	NA	NA	NA	NA	NA	122122037	122111852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122112012_122112197_122112431_122113541_122113696_122113930_122114059_122114329_122114380_122115053_122115154_122115228_122115460_122115641_122115821_122116505_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076_122121263_122121544_122121748_122121921
ENSMUSG00000068452.9_122112295_122122759_1	chr2	-	2301	17	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	5529	1392	5529	-1392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGCCTGCACATCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	122122759	122112294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122112431_122113541_122113696_122113930_122114059_122114329_122114380_122115053_122115154_122115228_122115460_122115641_122115821_122116505_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076_122121263_122121544_122121748_122121921_122122036_122122292_122122431_122122739
ENSMUSG00000068452.9_122112337_122122830_1	chr2	-	2330	17	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	5458	1434	5458	-1434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCACCCCTTCACGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	122122830	122112336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122112431_122113541_122113696_122113930_122114059_122114329_122114380_122115053_122115154_122115228_122115460_122115641_122115821_122116505_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076_122121263_122121544_122121748_122121921_122122036_122122292_122122431_122122739
ENSMUSG00000068452.9_122113550_122123175_1	chr2	-	2359	17	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	5113	2647	5113	-2647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTCAGGTACAAGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	122123175	122113549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122113696_122113930_122114059_122114329_122114380_122115053_122115154_122115228_122115460_122115641_122115821_122116505_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076_122121263_122121544_122121748_122121921_122122036_122122292_122122431_122122739_122122859_122123072
ENSMUSG00000068452.9_122113625_122123209_1	chr2	-	2318	17	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	5079	2722	5079	-2722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTATGGAGGGGACAAGC	NA	NA	NA	NA	NA	NA	NA	NA	122123209	122113624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122113696_122113930_122114059_122114329_122114380_122115053_122115154_122115228_122115460_122115641_122115821_122116505_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076_122121263_122121544_122121748_122121921_122122036_122122292_122122431_122122739_122122859_122123072
ENSMUSG00000068452.9_122113937_122123811_1	chr2	-	2307	17	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	4477	3034	4477	-3034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGTGAGTACCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	122123811	122113936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122114059_122114329_122114380_122115053_122115154_122115228_122115460_122115641_122115821_122116505_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076_122121263_122121544_122121748_122121921_122122036_122122292_122122431_122122739_122122859_122123072_122123249_122123784
ENSMUSG00000068452.9_122113993_122123859_1	chr2	-	2299	17	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	4429	3090	4429	-3090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCCACAGTTTCCGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	122123859	122113992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122114059_122114329_122114380_122115053_122115154_122115228_122115460_122115641_122115821_122116505_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076_122121263_122121544_122121748_122121921_122122036_122122292_122122431_122122739_122122859_122123072_122123249_122123784
ENSMUSG00000068452.9_122114037_122123919_1	chr2	-	2315	17	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	4369	3134	4369	-3134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCCTGGCCATCATGT	NA	NA	NA	NA	NA	NA	NA	NA	122123919	122114036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122114059_122114329_122114380_122115053_122115154_122115228_122115460_122115641_122115821_122116505_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076_122121263_122121544_122121748_122121921_122122036_122122292_122122431_122122739_122122859_122123072_122123249_122123784
ENSMUSG00000068452.9_122115090_122124545_1	chr2	-	2310	16	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	3743	4187	3743	-4187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGCGTCTTCCCTAACG	NA	NA	NA	NA	NA	NA	NA	NA	122124545	122115089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122115154_122115228_122115460_122115641_122115821_122116505_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076_122121263_122121544_122121748_122121921_122122036_122122292_122122431_122122739_122122859_122123072_122123249_122123784_122123949_122124471
ENSMUSG00000068452.9_122115343_122125635_1	chr2	-	2322	17	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	2653	4440	2653	-4440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCGCAACCTCATCACC	NA	NA	NA	NA	NA	NA	NA	NA	122125635	122115342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122115460_122115641_122115821_122116505_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076_122121263_122121544_122121748_122121921_122122036_122122292_122122431_122122739_122122859_122123072_122123249_122123784_122123949_122124471_122124575_122125069_122125161_122125565
ENSMUSG00000068452.9_122115669_122126514_1	chr2	-	2305	18	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	1774	4766	1774	-4766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCTGTTTGCAGACCGT	NA	NA	NA	NA	NA	NA	NA	NA	122126514	122115668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122115821_122116505_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076_122121263_122121544_122121748_122121921_122122036_122122292_122122431_122122739_122122859_122123072_122123249_122123784_122123949_122124471_122124575_122125069_122125161_122125565_122125663_122125774_122125836_122126475
ENSMUSG00000068452.9_122115718_122126569_1	chr2	-	2311	18	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	1719	4815	1719	-4815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACCGGCGCCACATTGT	NA	NA	NA	NA	NA	NA	NA	NA	122126569	122115717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122115821_122116505_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076_122121263_122121544_122121748_122121921_122122036_122122292_122122431_122122739_122122859_122123072_122123249_122123784_122123949_122124471_122124575_122125069_122125161_122125565_122125663_122125774_122125836_122126475
ENSMUSG00000068452.9_122115774_122126617_1	chr2	-	2303	18	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	1671	4871	1671	-4871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGAGTGGCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	122126617	122115773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122115821_122116505_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076_122121263_122121544_122121748_122121921_122122036_122122292_122122431_122122739_122122859_122123072_122123249_122123784_122123949_122124471_122124575_122125069_122125161_122125565_122125663_122125774_122125836_122126475
ENSMUSG00000068452.9_122116552_122126894_1	chr2	-	2331	18	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	1394	5649	1394	-5649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAGAACTGGGAAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	122126894	122116551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122116590_122116963_122117026_122117482_122117679_122119772_122119867_122119948_122120175_122121076_122121263_122121544_122121748_122121921_122122036_122122292_122122431_122122739_122122859_122123072_122123249_122123784_122123949_122124471_122124575_122125069_122125161_122125565_122125663_122125774_122125836_122126475_122126643_122126798
ENSMUSG00000068452.9_122119846_122127913_1	chr2	-	2313	17	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	375	8943	375	-8943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGATGTTTACCATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	122127913	122119845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122119867_122119948_122120175_122121076_122121263_122121544_122121748_122121921_122122036_122122292_122122431_122122739_122122859_122123072_122123249_122123784_122123949_122124471_122124575_122125069_122125161_122125565_122125663_122125774_122125836_122126475_122126643_122126798_122127001_122127162_122127351_122127856
ENSMUSG00000068452.9_122119948_122128021_1	chr2	-	2401	16	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	267	9045	267	-9045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGTGGGGTCTAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	122128021	122119947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122120175_122121076_122121263_122121544_122121748_122121921_122122036_122122292_122122431_122122739_122122859_122123072_122123249_122123784_122123949_122124471_122124575_122125069_122125161_122125565_122125663_122125774_122125836_122126475_122126643_122126798_122127001_122127162_122127351_122127856
ENSMUSG00000068452.9_122120102_122128255_1	chr2	-	2299	17	ISM	ENSMUSG00000068452.9	ENST00000389039.11	4578	32	33	9199	33	-9199	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGAGCTGAGCAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	122128255	122120101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_122120175_122121076_122121263_122121544_122121748_122121921_122122036_122122292_122122431_122122739_122122859_122123072_122123249_122123784_122123949_122124471_122124575_122125069_122125161_122125565_122125663_122125774_122125836_122126475_122126643_122126798_122127001_122127162_122127351_122127856_122128022_122128203
ENSMUSG00000068479.6_121323760_121325447_1	chr2	-	1606	2	ISM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	11699	1368	11699	-1368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCAGAGGCAGGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	121325447	121323759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121325329_121325410
ENSMUSG00000068479.6_121323879_121327857_1	chr2	-	1588	3	ISM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	9289	1487	9289	-1487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTCTATGGAATGTATG	NA	NA	NA	NA	NA	NA	NA	NA	121327857	121323878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121325329_121325410_121325501_121327809
ENSMUSG00000068479.6_121323957_121327916_1	chr2	-	1569	3	ISM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	9230	1565	9230	-1565	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTTTGATCCTATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	121327916	121323956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121325329_121325410_121325501_121327809
ENSMUSG00000068479.6_121324080_121329823_1	chr2	-	1556	4	ISM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	7323	1688	7323	-1688	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATCCCTAGTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	121329823	121324079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766
ENSMUSG00000068479.6_121324235_121330095_1	chr2	-	1582	5	ISM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	7051	1843	7051	-1843	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTTCAGGACCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	121330095	121324234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018
ENSMUSG00000068479.6_121324486_121333027_1	chr2	-	1578	6	ISM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	4119	2094	4119	-2094	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTAACTAAAAGTAGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	121333027	121324485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812
ENSMUSG00000068479.6_121324548_121333074_1	chr2	-	1563	6	ISM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	4072	2156	4072	-2156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCACTCCAGGCCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	121333074	121324547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812
ENSMUSG00000068479.6_121324777_121333304_1	chr2	-	1564	6	ISM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	3842	2385	3842	-2385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTAGGAGTAGGCTATCA	NA	NA	NA	NA	NA	NA	NA	NA	121333304	121324776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812
ENSMUSG00000068479.6_121324911_121337031_1	chr2	-	1564	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	115	2519	115	-2519	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACATTGACTTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	121337031	121324910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ENSMUSG00000068479.6_121324980_121337146_1	chr2	-	1610	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	0	2588	0	-2588	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACCGGGTAGGCTAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	121337146	121324979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ENSMUSG00000068523.13_146205645_146211303_1	chr3	+	480	3	NNC	ENSMUSG00000068523.13	novel	593	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3036	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTCCTTACTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	146205644	146211303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_146205770_146209014_146209155_146211088
ENSMUSG00000068523.13_146205645_146211303_2	chr3	+	486	3	FSM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	83	24	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTCCTTACTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	146205644	146211303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_146205776_146209014_146209155_146211088
ENSMUSG00000068566.14_3339059_3346205_1	chr7	+	1153	3	FSM	ENSMUSG00000068566.14	ENSMUST00000096744.8	2813	3	0	1660	0	-596	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAAGGGGCTCCCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	3339058	3346205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_3339156_3341727_3341816_3345237
ENSMUSG00000068566.14_3339205_3345330_1	chr7	+	294	3	FSM	ENSMUSG00000068566.14	ENSMUST00000203566.3	4027	3	105	3628	105	-1471	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTCCGCCTCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	3339204	3345330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_3339318_3341727_3341816_3345237
ENSMUSG00000068566.14_3341726_3346358_1	chr7	+	1211	2	FSM	ENSMUSG00000068566.14	ENSMUST00000164553.8	2798	2	107	1480	107	-443	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTTTCTTACCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	3341725	3346358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_3341816_3345237
ENSMUSG00000068580.12_119039266_119041021_1	chr2	+	462	2	NNC	ENSMUSG00000068580.12	novel	1505	10	NA	NA	151	-6509	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACCCCGGGCTGGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	119039265	119041021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_119039669_119040962
ENSMUSG00000068580.12_119039328_119041042_1	chr2	+	421	2	NNC	ENSMUSG00000068580.12	novel	1505	10	NA	NA	-180	-6488	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACAGAAAGTCTGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	119039327	119041042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_119039669_119040962
ENSMUSG00000068580.12_119039387_119041084_1	chr2	+	404	2	NNC	ENSMUSG00000068580.12	novel	1505	10	NA	NA	-121	-6446	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGATGGGCTCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	119039386	119041084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_119039669_119040962
ENSMUSG00000068580.12_119040961_119045370_1	chr2	+	605	6	ISM	ENSMUSG00000068580.12	ENSMUST00000102519.5	1505	10	1453	2160	1453	-2160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCCAGGCCAGCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	119040960	119045370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042386_119042496_119045314
ENSMUSG00000068580.12_119041944_119045521_1	chr2	+	397	3	ISM	ENSMUSG00000068580.12	ENSMUST00000102519.5	1505	10	2436	2009	2436	-2009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGGTTCTAGCCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	119041943	119045521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119042025_119042386_119042496_119045314
ENSMUSG00000068580.12_119042425_119046758_1	chr2	+	421	4	ISM	ENSMUSG00000068580.12	ENSMUST00000102519.5	1505	10	2917	772	2917	-772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGCCCAACCCTGCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	119042424	119046758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119042496_119045314_119045522_119045934_119046009_119046689
ENSMUSG00000068580.12_119045325_119047300_1	chr2	+	561	4	ISM	ENSMUSG00000068580.12	ENSMUST00000102519.5	1505	10	5817	230	5817	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTAAACACACCCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	119045324	119047300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119045522_119045934_119046009_119046689_119046789_119047109
ENSMUSG00000068580.12_119045383_119047123_1	chr2	+	436	5	ISM	ENSMUSG00000068580.12	ENSMUST00000090174.11	2008	11	6268	407	5875	-407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGATCTTAAAGAACAT	NA	NA	NA	NA	NA	NA	NA	NA	119045382	119047123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
ENSMUSG00000068580.12_119045398_119047348_1	chr2	+	536	4	ISM	ENSMUSG00000068580.12	ENSMUST00000102519.5	1505	10	5890	182	5890	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAATAAGTCTGAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	119045397	119047348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119045522_119045934_119046009_119046689_119046789_119047109
ENSMUSG00000068580.12_119045488_119047248_1	chr2	+	456	5	ISM	ENSMUSG00000068580.12	ENSMUST00000090174.11	2008	11	6373	282	5980	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGCCAAGTCTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	119045487	119047248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
ENSMUSG00000068580.12_119047001_119047530_1	chr2	+	443	2	ISM	ENSMUSG00000068580.12	ENSMUST00000090174.11	2008	11	7886	0	7493	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGATGTTTTTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	119047000	119047530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119047023_119047109
ENSMUSG00000068587.11_40634384_40683948_1	chr6	+	2197	19	NIC	ENSMUSG00000068587.11	novel	10851	93	NA	NA	2845	-57250	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCCCTCTACACCTG	NA	NA	NA	NA	NA	NA	NA	NA	40634383	40683948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_40634480_40635099_40635213_40635863_40635990_40638194_40638327_40638543_40638661_40639529_40639644_40640439_40640525_40641739_40641858_40643782_40643955_40645105_40645223_40646673_40646829_40648011_40648097_40648827_40648885_40649381_40649507_40652247_40652337_40653957_40654008_40680263_40680432_40683304_40683458_40683823
ENSMUSG00000068587.11_40638607_40724844_1	chr6	+	2219	19	NIC	ENSMUSG00000068587.11	novel	10851	93	NA	NA	7068	-16354	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTTATGTATTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	40638606	40724844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_40638661_40639529_40639644_40640439_40640525_40641739_40641858_40643782_40643955_40645105_40645223_40646673_40646829_40648011_40648097_40648827_40648885_40649381_40649507_40652247_40652337_40653957_40654008_40680263_40680432_40683304_40683458_40683823_40684025_40722110_40722266_40723251_40723421_40723987_40724085_40724789
ENSMUSG00000068587.11_40683822_40741203_1	chr6	+	2319	20	ISM	ENSMUSG00000068587.11	ENST00000620571.1	4828	41	52283	-5	-22064	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGGGGATGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	40683821	40741203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40684025_40722110_40722266_40723251_40723421_40723987_40724085_40724789_40724903_40725959_40726086_40727071_40727201_40727446_40727558_40727852_40727916_40731828_40731964_40732373_40732462_40733255_40733395_40734362_40734497_40734620_40734656_40734746_40734864_40735956_40736106_40736705_40736791_40737974_40738032_40740011_40740137_40741114
ENSMUSG00000068614.8_113877763_113879736_1	chr2	-	597	3	ISM	ENSMUSG00000068614.8	ENSMUST00000090269.7	1473	7	3632	0	3632	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	845	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTCTTTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	113879736	113877762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113878091_113878603_113878786_113879649
ENSMUSG00000068614.8_113877984_113880012_1	chr2	-	498	4	ISM	ENSMUSG00000068614.8	ENSMUST00000090269.7	1473	7	3356	221	3356	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGCCCATCCATTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	113880012	113877983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113878091_113878603_113878786_113879649_113879842_113879995
ENSMUSG00000068614.8_113878029_113880070_1	chr2	-	511	4	ISM	ENSMUSG00000068614.8	ENSMUST00000090269.7	1473	7	3298	266	3298	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCACCTTCCAGCAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	113880070	113878028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113878091_113878603_113878786_113879649_113879842_113879995
ENSMUSG00000068614.8_113878071_113880130_1	chr2	-	529	4	ISM	ENSMUSG00000068614.8	ENSMUST00000090269.7	1473	7	3238	308	3238	-308	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATACTCTGTCTGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	113880130	113878070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113878091_113878603_113878786_113879649_113879842_113879995
ENSMUSG00000068614.8_113878663_113880787_1	chr2	-	495	4	ISM	ENSMUSG00000068614.8	ENSMUST00000090269.7	1473	7	2581	900	2581	-900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCGATCGTATGCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	113880787	113878662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113878786_113879649_113879842_113879995_113880158_113880769
ENSMUSG00000068614.8_113878702_113880849_1	chr2	-	518	4	ISM	ENSMUSG00000068614.8	ENSMUST00000090269.7	1473	7	2519	939	2519	-939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTCCTATCTGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	113880849	113878701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113878786_113879649_113879842_113879995_113880158_113880769
ENSMUSG00000068614.8_113878763_113880890_1	chr2	-	498	4	ISM	ENSMUSG00000068614.8	ENSMUST00000090269.7	1473	7	2478	1000	2478	-1000	internal_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTACTTACAACAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	113880890	113878762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113878786_113879649_113879842_113879995_113880158_113880769
ENSMUSG00000068614.8_113880058_113882478_1	chr2	-	520	3	ISM	ENSMUSG00000068614.8	ENSMUST00000090269.7	1473	7	890	2295	890	-2295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTCACTGACTACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	113882478	113880057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_113880158_113880769_113881095_113882383
ENSMUSG00000068617.6_14724470_14742019_1	chr16	+	642	5	FSM	ENSMUSG00000068617.6	ENST00000433756.1	659	5	18	-1	18	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTGAGTAAGTACAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	14724469	14742019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_14724677_14735506_14735612_14738158_14738311_14738644_14738750_14741946
ENSMUSG00000068617.6_14724470_14742019_2	chr16	+	641	5	NNC	ENSMUSG00000068617.6	novel	659	5	NA	NA	18	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTGAGTAAGTACAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	14724469	14742019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_14724677_14735506_14735612_14738159_14738311_14738644_14738750_14741946
ENSMUSG00000068617.6_14724470_14742019_3	chr16	+	640	5	NNC	ENSMUSG00000068617.6	novel	659	5	NA	NA	18	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTGAGTAAGTACAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	14724469	14742019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_14724677_14735506_14735612_14738158_14738311_14738644_14738750_14741948
ENSMUSG00000068697.8_20699175_20703792_1	chr14	-	1011	4	ISM	ENSMUSG00000068697.8	ENSMUST00000090469.8	1289	6	2816	0	1637	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCACTCTTCCTCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	20703792	20699174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20699678_20700556_20700723_20701094_20701336_20703691
ENSMUSG00000068697.8_20699175_20703792_2	chr14	-	1010	4	NNC	ENSMUSG00000068697.8	novel	1192	5	NA	NA	1637	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2207	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCACTCTTCCTCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	20703792	20699174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_20699673_20700556_20700723_20701090_20701336_20703691
ENSMUSG00000068697.8_20699293_20705362_1	chr14	-	990	5	ISM	ENSMUSG00000068697.8	ENSMUST00000090469.8	1289	6	1246	118	67	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1615	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGAAGCATCCCTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	20705362	20699292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20699678_20700556_20700723_20701094_20701336_20703691_20703871_20705343
ENSMUSG00000068697.8_20699353_20705410_1	chr14	-	978	5	ISM	ENSMUSG00000068697.8	ENSMUST00000090469.8	1289	6	1198	178	19	-178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1037	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGGCAATGGAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	20705410	20699352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_20699678_20700556_20700723_20701094_20701336_20703691_20703871_20705343
ENSMUSG00000068697.8_20699386_20705405_1	chr14	-	939	5	NNC	ENSMUSG00000068697.8	novel	1192	5	NA	NA	24	-211	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACAGGATGCCCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	20705405	20699385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_20699673_20700556_20700723_20701090_20701336_20703691_20703871_20705343
ENSMUSG00000068735.15_93017893_93030653_1	chr2	+	1041	6	FSM	ENSMUSG00000068735.15	ENST00000616990.4	1054	6	82	-69	0	69	multi-exon	FALSE	canonical	NA	NA	NA	NA	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCATCACACACGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	93017892	93030653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_93017967_93027953_93028094_93028607_93028683_93029209_93029337_93029701_93029804_93030130
ENSMUSG00000068735.15_93017893_93030653_2	chr2	+	1038	6	NIC	ENSMUSG00000068735.15	novel	1054	6	NA	NA	0	69	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCATCACACACGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	93017892	93030653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_93017967_93027956_93028094_93028607_93028683_93029209_93029337_93029701_93029804_93030130
ENSMUSG00000068735.15_93018015_93030653_1	chr2	+	988	6	FSM	ENSMUSG00000068735.15	ENST00000308212.9	1123	6	204	-69	86	69	multi-exon	FALSE	canonical	NA	NA	NA	NA	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCATCACACACGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	93018014	93030653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_93018042_93027959_93028094_93028607_93028683_93029209_93029337_93029701_93029804_93030130
ENSMUSG00000068739.14_108332181_108341523_1	chr3	-	3213	8	NNC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	10931	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAAGGTGTGGTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	108341523	108332180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340471_108341360
ENSMUSG00000068739.14_108332181_108344895_1	chr3	-	3368	10	ISM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	7619	0	7559	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAAGGTGTGGTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	108344895	108332180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824
ENSMUSG00000068739.14_108332181_108352459_1	chr3	-	3515	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	55	0	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAAGGTGTGGTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	108352459	108332180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ENSMUSG00000068739.14_108332382_108352459_1	chr3	-	3314	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	55	201	-5	-201	multi-exon	FALSE	canonical	NA	NA	NA	NA	2695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGGACAAGAGCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	108352459	108332381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ENSMUSG00000068739.14_108332436_108352514_1	chr3	-	3315	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	0	255	0	-255	multi-exon	FALSE	canonical	NA	NA	NA	NA	1748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGAGTCTTCCCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	108352514	108332435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ENSMUSG00000068739.14_108334140_108336682_1	chr3	-	774	6	ISM	ENSMUSG00000068739.14	ENST00000369923.4	1860	12	15772	237	15772	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACTTACTTACTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	108336682	108334139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108334298_108334575_108334706_108335176_108335249_108335489_108335648_108335921_108336052_108336556
ENSMUSG00000068739.14_108334204_108335567_1	chr3	-	374	4	ISM	ENSMUSG00000068739.14	ENST00000369923.4	1860	12	16887	301	16887	-276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGAAAGAGGTCCCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	108335567	108334203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108334298_108334575_108334706_108335176_108335249_108335489
ENSMUSG00000068742.12_92233991_92243764_1	chr2	-	2696	6	ISM	ENSMUSG00000068742.12	ENST00000616623.4	3836	13	20556	-2	20556	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGTGTAATCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	92243764	92233990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_92234910_92234979_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611
ENSMUSG00000068742.12_92234092_92244095_1	chr2	-	2709	7	ISM	ENSMUSG00000068742.12	ENST00000443527.6	3835	13	20225	98	20225	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTACAGAGTTCCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	92244095	92234091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_92234910_92234979_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980
ENSMUSG00000068742.12_92234157_92244141_1	chr2	-	2690	7	ISM	ENSMUSG00000068742.12	ENST00000443527.6	3835	13	20179	163	20179	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTGCCCCATGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	92244141	92234156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_92234910_92234979_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980
ENSMUSG00000068742.12_92234359_92246536_1	chr2	-	2677	8	ISM	ENSMUSG00000068742.12	ENST00000443527.6	3835	13	17784	365	17784	-365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGATGATGGTTCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	92246536	92234358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_92234910_92234979_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498
ENSMUSG00000068742.12_92234544_92253292_1	chr2	-	2754	10	ISM	ENSMUSG00000068742.12	ENST00000443527.6	3835	13	11028	550	11028	-550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAGTTCTGGGGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	92253292	92234543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_92234910_92234979_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222
ENSMUSG00000068742.12_92234630_92253312_1	chr2	-	2688	10	ISM	ENSMUSG00000068742.12	ENST00000443527.6	3835	13	11008	636	11008	-636	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCAACTGTTTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	92253312	92234629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_92234910_92234979_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222
ENSMUSG00000068742.12_92234759_92254908_1	chr2	-	2673	11	ISM	ENSMUSG00000068742.12	ENST00000443527.6	3835	13	9412	765	9412	-765	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGGCCCTGGCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	92254908	92234758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_92234910_92234979_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889
ENSMUSG00000068742.12_92234806_92254970_1	chr2	-	2688	11	ISM	ENSMUSG00000068742.12	ENST00000443527.6	3835	13	9350	812	9350	-812	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTCTACCTCCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	92254970	92234805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_92234910_92234979_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889
ENSMUSG00000068742.12_92234871_92255027_1	chr2	-	2680	11	ISM	ENSMUSG00000068742.12	ENST00000443527.6	3835	13	9293	877	9293	-877	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	92255027	92234870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_92234910_92234979_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889
ENSMUSG00000068742.12_92234980_92257355_1	chr2	-	2755	11	ISM	ENSMUSG00000068742.12	ENST00000443527.6	3835	13	6965	986	6965	-986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATGTGTGGGGAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	92257355	92234979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246
ENSMUSG00000068742.12_92235099_92264196_1	chr2	-	2676	12	FSM	ENSMUSG00000068742.12	ENSMUST00000090559.12	3976	12	192	1108	124	-1105	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGAGCCAACTCTCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	92264196	92235098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ENSMUSG00000068742.12_92235158_92264241_1	chr2	-	2662	12	FSM	ENSMUSG00000068742.12	ENSMUST00000090559.12	3976	12	147	1167	79	-1164	multi-exon	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCTTCTCAGAGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	92264241	92235157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ENSMUSG00000068742.12_92235191_92264381_1	chr2	-	2769	12	FSM	ENSMUSG00000068742.12	ENSMUST00000090559.12	3976	12	7	1200	0	-1197	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGGAAGGTCAGAGATCA	NA	NA	NA	NA	NA	NA	NA	NA	92264381	92235190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ENSMUSG00000068744.13_108293948_108295112_1	chr3	+	421	3	ISM	ENSMUSG00000068744.13	ENSMUST00000090561.10	1686	8	2793	383	2773	-383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCACCCTACCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	108293947	108295112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108294053_108294593_108294712_108294914
ENSMUSG00000068748.8_22925855_22999628_1	chr6	+	1633	11	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	24	52597	24	-5049	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACGTCAGTGAGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	22925854	22999628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_22925895_22959628_22959809_22961594_22961747_22965160_22965257_22965725_22965793_22972710_22972869_22973010_22973162_22986129_22986315_22987329_22987457_22994516_22994564_22999198
ENSMUSG00000068748.8_22961606_23000172_1	chr6	+	1946	9	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	35775	52053	35775	-4505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGACGACTCAACCAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	22961605	23000172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_22961747_22965160_22965257_22965725_22965793_22972710_22972869_22973010_22973162_22986129_22986315_22987329_22987457_22994516_22994564_22999198
ENSMUSG00000068748.8_22972727_23022260_1	chr6	+	1952	9	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	46896	29965	46896	17583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGTTCACTGAAGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	22972726	23022260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_22972869_22973010_22973162_22986129_22986315_22987329_22987457_22994516_22994564_22999198_23000199_23007272_23007418_23016137_23016230_23022197
ENSMUSG00000068748.8_22973007_23027915_1	chr6	+	2018	10	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	47176	24310	47176	23238	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCATTTTTATGGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	22973006	23027915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_22973162_22986129_22986315_22987329_22987457_22994516_22994564_22999198_23000199_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831
ENSMUSG00000068748.8_22973048_23000370_1	chr6	+	1645	5	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	47217	51855	47217	-4307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTATGATGATGCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	22973047	23000370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_22973162_22986129_22986315_22987329_22987457_22994516_22994564_22999198
ENSMUSG00000068748.8_22986157_23000492_1	chr6	+	1626	4	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	60326	51733	60326	-4185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTTTGCATGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	22986156	23000492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_22986315_22987329_22987457_22994516_22994564_22999198
ENSMUSG00000068748.8_22986308_23000555_1	chr6	+	1538	4	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	60477	51670	60477	-4122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTATTCTGATGTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	22986307	23000555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_22986315_22987329_22987457_22994516_22994564_22999198
ENSMUSG00000068748.8_22987376_23033405_1	chr6	+	1965	11	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	61545	18820	61545	-18820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGTGTTCCCGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	22987375	23033405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_22987457_22994516_22994564_22999198_23000199_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341
ENSMUSG00000068748.8_22987381_23000703_1	chr6	+	1628	3	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	61550	51522	61550	-3974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCGGGGCCTGAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	22987380	23000703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_22987457_22994516_22994564_22999198
ENSMUSG00000068748.8_22987425_23033457_1	chr6	+	1968	11	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	61594	18768	61594	-18768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGGCCAAGCGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	22987424	23033457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_22987457_22994516_22994564_22999198_23000199_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341
ENSMUSG00000068748.8_22987429_23000788_1	chr6	+	1665	3	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	61598	51437	61598	-3889	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCTGTCGATGTATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	22987428	23000788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_22987457_22994516_22994564_22999198
ENSMUSG00000068748.8_22999248_23035118_1	chr6	+	1963	10	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	73417	17107	73417	-17107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATATTTGGCTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	22999247	23035118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23000199_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341_23033506_23035043
ENSMUSG00000068748.8_22999371_23036933_1	chr6	+	1951	11	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	73540	15292	73540	-15292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACGGAGGTACCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	22999370	23036933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23000199_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341_23033506_23035043_23035180_23036883
ENSMUSG00000068748.8_22999538_23042376_1	chr6	+	1935	12	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	73707	9849	73707	-9849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAACAGGGAGAAGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	22999537	23042376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23000199_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341_23033506_23035043_23035180_23036883_23037031_23042322
ENSMUSG00000068748.8_22999819_23045655_1	chr6	+	1949	15	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	73988	6570	73988	-6570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTCAAAGTCACGCTT	NA	NA	NA	NA	NA	NA	NA	NA	22999818	23045655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23000199_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341_23033506_23035043_23035180_23036883_23037031_23042322_23042417_23042746_23042821_23044245_23044375_23045603
ENSMUSG00000068748.8_23000031_23049644_1	chr6	+	1947	16	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	74200	2581	74200	-2581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGGGCCCATGATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	23000030	23049644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23000199_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341_23033506_23035043_23035180_23036883_23037031_23042322_23042417_23042746_23042821_23044245_23044375_23045603_23045751_23049529
ENSMUSG00000068748.8_23001144_23007307_1	chr6	+	1637	2	ISM	ENSMUSG00000068748.8	ENST00000652298.1	7642	28	75313	45588	75313	2630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTGAGGGGTTGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	23001143	23007307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23002746_23007272
ENSMUSG00000068748.8_23001184_23007377_1	chr6	+	1667	2	ISM	ENSMUSG00000068748.8	ENST00000652298.1	7642	28	75353	45518	75353	2700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTAGTGGTTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	23001183	23007377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23002746_23007272
ENSMUSG00000068748.8_23001485_23024988_1	chr6	+	1629	5	ISM	ENSMUSG00000068748.8	ENST00000652298.1	7642	28	75654	27907	75654	20311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAATCACCCAGACAACAA	NA	NA	NA	NA	NA	NA	NA	NA	23001484	23024988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23002746_23007272_23007418_23016137_23016230_23022197_23022284_23024943
ENSMUSG00000068748.8_23001644_23029302_1	chr6	+	1689	7	ISM	ENSMUSG00000068748.8	ENST00000652298.1	7642	28	75813	23593	75813	-22923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATGTGGAAGTCATCGT	NA	NA	NA	NA	NA	NA	NA	NA	23001643	23029302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23002746_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218
ENSMUSG00000068748.8_23001836_23030655_1	chr6	+	1615	8	ISM	ENSMUSG00000068748.8	ENST00000652298.1	7642	28	76005	22240	76005	-21570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGTTCAGGTGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	23001835	23030655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23002746_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588
ENSMUSG00000068748.8_23001940_23033383_1	chr6	+	1621	9	ISM	ENSMUSG00000068748.8	ENST00000652298.1	7642	28	76109	19512	76109	-18842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTACACCCAGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	23001939	23033383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23002746_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341
ENSMUSG00000068748.8_23002001_23033451_1	chr6	+	1628	9	ISM	ENSMUSG00000068748.8	ENST00000652298.1	7642	28	76170	19444	76170	-18774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGCCCAGGCCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	23002000	23033451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23002746_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341
ENSMUSG00000068748.8_23002236_23036952_1	chr6	+	1652	11	ISM	ENSMUSG00000068748.8	ENST00000652298.1	7642	28	76405	15943	76405	-15273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACATTCACTCCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	23002235	23036952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23002746_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341_23033506_23035043_23035180_23036883
ENSMUSG00000068748.8_23002405_23024993_1	chr6	+	738	5	ISM	ENSMUSG00000068748.8	ENST00000393386.7	7686	28	76574	27922	76574	20316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACCCAGACAACAAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	23002404	23024993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23002746_23007272_23007418_23016137_23016230_23022197_23022284_23024919
ENSMUSG00000068748.8_23002506_23044266_1	chr6	+	1649	14	ISM	ENSMUSG00000068748.8	ENST00000652298.1	7642	28	76675	8629	76675	-7959	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCATCACCCAGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	23002505	23044266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23002746_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341_23033506_23035043_23035180_23036883_23037031_23042322_23042417_23042746_23042821_23044245
ENSMUSG00000068748.8_23002566_23044307_1	chr6	+	1630	14	ISM	ENSMUSG00000068748.8	ENST00000652298.1	7642	28	76735	8588	76735	-7918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGGAGAATGATATGGG	NA	NA	NA	NA	NA	NA	NA	NA	23002565	23044307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23002746_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341_23033506_23035043_23035180_23036883_23037031_23042322_23042417_23042746_23042821_23044245
ENSMUSG00000068748.8_23002626_23029316_1	chr6	+	745	7	ISM	ENSMUSG00000068748.8	ENST00000393386.7	7686	28	76795	23599	76795	-22909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCGTCATGATCACAAACC	NA	NA	NA	NA	NA	NA	NA	NA	23002625	23029316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23002746_23007272_23007418_23016137_23016230_23022197_23022284_23024919_23025041_23027831_23027915_23029218
ENSMUSG00000068748.8_23002667_23045630_1	chr6	+	1623	15	ISM	ENSMUSG00000068748.8	ENST00000652298.1	7642	28	76836	7265	76836	-6595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGATGAGCCCATAAA	NA	NA	NA	NA	NA	NA	NA	NA	23002666	23045630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23002746_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341_23033506_23035043_23035180_23036883_23037031_23042322_23042417_23042746_23042821_23044245_23044375_23045603
ENSMUSG00000068748.8_23007331_23052012_1	chr6	+	1927	17	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	81500	213	81500	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCACAAGGCAGGAAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	23007330	23052012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341_23033506_23035043_23035180_23036883_23037031_23042322_23042417_23042746_23042821_23044245_23044375_23045603_23045751_23049529_23049673_23050395_23050532_23051970
ENSMUSG00000068748.8_23033365_23052446_1	chr6	+	1623	10	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	107534	-221	107534	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGTATTTGTAGCAATC	NA	NA	NA	NA	NA	NA	NA	NA	23033364	23052446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23033506_23035043_23035180_23036883_23037031_23042322_23042417_23042746_23042821_23044245_23044375_23045603_23045751_23049529_23049673_23050395_23050532_23051970
ENSMUSG00000068748.8_23033422_23052513_1	chr6	+	1633	10	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	107591	-288	107591	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACTTCATCCCCGATAA	NA	NA	NA	NA	NA	NA	NA	NA	23033421	23052513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23033506_23035043_23035180_23036883_23037031_23042322_23042417_23042746_23042821_23044245_23044375_23045603_23045751_23049529_23049673_23050395_23050532_23051970
ENSMUSG00000068748.8_23035062_23052620_1	chr6	+	1638	9	ISM	ENSMUSG00000068748.8	ENST00000652298.1	7642	28	109231	275	109231	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATATTTATAATTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	23035061	23052620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23035180_23036883_23037031_23042322_23042417_23042746_23042821_23044245_23044375_23045603_23045751_23049529_23049673_23050395_23050532_23051970
ENSMUSG00000068748.8_23035117_23052668_1	chr6	+	1631	9	ISM	ENSMUSG00000068748.8	ENST00000652298.1	7642	28	109286	227	109286	52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTGGTGTACTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	23035116	23052668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23035180_23036883_23037031_23042322_23042417_23042746_23042821_23044245_23044375_23045603_23045751_23049529_23049673_23050395_23050532_23051970
ENSMUSG00000068748.8_23036958_23052915_1	chr6	+	1741	8	ISM	ENSMUSG00000068748.8	ENST00000393386.7	7686	28	111127	0	111127	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTTCACTTGTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	23036957	23052915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_23037031_23042322_23042417_23042746_23042821_23044245_23044375_23045603_23045751_23049529_23049673_23050395_23050532_23051970
ENSMUSG00000068749.10_108164242_108172442_1	chr3	+	508	3	ISM	ENSMUSG00000068749.10	ENSMUST00000090569.10	1239	9	0	14848	0	-14686	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	673	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACCTCCCCACTAATG	NA	NA	NA	NA	NA	NA	NA	NA	108164241	108172442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108164622_108169001_108169069_108172381
ENSMUSG00000068749.10_108164505_108175191_1	chr3	+	462	5	ISM	ENSMUSG00000068749.10	ENSMUST00000090569.10	1239	9	263	12099	263	-11937	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	752	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGATGCAGATCCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	108164504	108175191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108164622_108169001_108169069_108172381_108172509_108173748_108173817_108175108
ENSMUSG00000068749.10_108164560_108175363_1	chr3	+	447	6	ISM	ENSMUSG00000068749.10	ENSMUST00000090569.10	1239	9	318	11927	318	-11765	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCATTGTTGTTTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	108164559	108175363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108164622_108169001_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348
ENSMUSG00000068749.10_108169002_108179693_1	chr3	+	619	7	ISM	ENSMUSG00000068749.10	ENST00000538610.5	725	9	3656	7435	3656	-7435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTGCTCCCGCCCGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	108169001	108179693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143_108176247_108179606
ENSMUSG00000068758.9_8114273_8122753_1	chr14	-	1376	11	FSM	ENSMUSG00000068758.9	ENSMUST00000224163.2	2315	11	418	521	-41	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTCCTGTGCTGCTATC	NA	NA	NA	NA	NA	NA	NA	NA	8122753	8114272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8120818_8120943_8121694_8121850_8122574
ENSMUSG00000068758.9_8117785_8123488_1	chr14	-	1385	10	ISM	ENSMUSG00000068758.9	ENSMUST00000090591.4	1614	12	0	3512	0	-3448	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCAGGGCTCGTGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	8123488	8117784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8120818_8120943_8121694_8121850_8122574_8122754_8123250
ENSMUSG00000068798.11_105635033_105639389_1	chr3	-	1366	2	ISM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	69263	450	69212	-450	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACAGCAGCTTGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	105639389	105635032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105636281_105639271
ENSMUSG00000068798.11_105635257_105646890_1	chr3	-	1345	4	ISM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	61762	674	61711	-674	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTATCGCAAATCCTA	NA	NA	NA	NA	NA	NA	NA	NA	105646890	105635256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829
ENSMUSG00000068798.11_105635299_105646951_1	chr3	-	1364	4	ISM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	61701	716	61650	660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGTAAAAAGATAAGTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	105646951	105635298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829
ENSMUSG00000068798.11_105635480_105653277_1	chr3	-	1317	6	ISM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	55375	897	55324	479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAACTACCCTAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	105653277	105635479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219
ENSMUSG00000068798.11_105635630_105708601_1	chr3	-	1309	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	51	1047	0	329	multi-exon	TRUE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGGATGATTAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	105708601	105635629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
ENSMUSG00000068823.11_102927742_102946177_1	chr3	+	838	3	ISM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	-181	19130	0	-18288	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAACCTCCAAGACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	102927741	102946177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102927986_102936104_102936529_102946007
ENSMUSG00000068823.11_102927923_102954494_1	chr3	+	1750	11	ISM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	0	10813	0	-9971	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGTTAGGTGATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	102927922	102954494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329
ENSMUSG00000068823.11_102936129_102947830_1	chr3	+	783	4	ISM	ENSMUSG00000068823.11	ENSMUST00000029446.13	4318	20	8387	17672	8149	-16635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTACGAACGTAATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	102936128	102947830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102936529_102946007_102946207_102947248_102947359_102947756
ENSMUSG00000068823.11_102936411_102950938_1	chr3	+	766	7	ISM	ENSMUSG00000068823.11	ENSMUST00000029446.13	4318	20	8669	14564	8431	-13527	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGACCTAGAAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	102936410	102950938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872
ENSMUSG00000068823.11_102936411_102950995_1	chr3	+	823	7	ISM	ENSMUSG00000068823.11	ENSMUST00000029446.13	4318	20	8669	14507	8431	-13470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATGTAAGATGGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	102936410	102950995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872
ENSMUSG00000068823.11_102936411_102958388_1	chr3	+	1698	13	ISM	ENSMUSG00000068823.11	ENSMUST00000197488.5	3827	19	8431	6732	8431	-6077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGACATGGTTGAATACA	NA	NA	NA	NA	NA	NA	NA	NA	102936410	102958388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355
ENSMUSG00000068823.11_102936411_102958420_1	chr3	+	1738	13	NNC	ENSMUSG00000068823.11	novel	3849	19	NA	NA	8431	-6045	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGGCAATAAAGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	102936410	102958420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957053_102957613_102957790_102958355
ENSMUSG00000068823.11_102936411_102958423_1	chr3	+	1733	13	ISM	ENSMUSG00000068823.11	ENSMUST00000197488.5	3827	19	8431	6697	8431	-6042	internal_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCAATAAAGTCAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	102936410	102958423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355
ENSMUSG00000068823.11_102936411_102958427_1	chr3	+	1730	13	NNC	ENSMUSG00000068823.11	novel	3849	19	NA	NA	8431	-6038	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAAGTCAGTGCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	102936410	102958427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956943_102957045_102957613_102957790_102958355
ENSMUSG00000068823.11_102946006_102960247_1	chr3	+	1782	13	ISM	ENSMUSG00000068823.11	ENSMUST00000199571.5	3123	18	18070	4771	18026	-4218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCACAGCCCTGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	102946005	102960247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127
ENSMUSG00000068823.11_102946147_102962050_1	chr3	+	1721	14	ISM	ENSMUSG00000068823.11	ENSMUST00000199571.5	3123	18	18211	2968	18167	-2415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGTTCCAGTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	102946146	102962050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970
ENSMUSG00000068823.11_102947315_102952146_1	chr3	+	774	7	ISM	ENSMUSG00000068823.11	ENSMUST00000197827.5	2671	19	19387	12319	19335	-12319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGAGATGGTAAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	102947314	102952146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944
ENSMUSG00000068823.11_102948483_102962748_1	chr3	+	1712	13	ISM	ENSMUSG00000068823.11	ENSMUST00000197827.5	2671	19	20555	1717	20503	-1717	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGAGATGAGGTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	102948482	102962748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664
ENSMUSG00000068823.11_102950858_102963793_1	chr3	+	1782	12	ISM	ENSMUSG00000068823.11	ENSMUST00000197827.5	2671	19	22930	672	22878	-672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATTTCATTAGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	102950857	102963793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660
ENSMUSG00000068823.11_102951122_102964296_1	chr3	+	1733	12	ISM	ENSMUSG00000068823.11	ENSMUST00000197827.5	2671	19	23194	169	23142	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGGTGAAGGGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	102951121	102964296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUSG00000068823.11_102951942_102964448_1	chr3	+	1762	11	ISM	ENSMUSG00000068823.11	ENSMUST00000197827.5	2671	19	24014	17	23962	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACAGTTGCAGCCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	102951941	102964448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUSG00000068823.11_102952100_102964517_1	chr3	+	1673	11	ISM	ENSMUSG00000068823.11	ENSMUST00000197827.5	2671	19	24172	-52	24120	52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTAACGCAACTGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	102952099	102964517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUSG00000068823.11_102954330_102964802_1	chr3	+	1759	9	ISM	ENSMUSG00000068823.11	ENSMUST00000199571.5	3123	18	26394	216	26350	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTATAATCTTGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	102954329	102964802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUSG00000068823.11_102957612_102965018_1	chr3	+	1704	7	ISM	ENSMUSG00000068823.11	ENSMUST00000199571.5	3123	18	29676	0	29632	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGCTGCTTAGATCACT	NA	NA	NA	NA	NA	NA	NA	NA	102957611	102965018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUSG00000068823.11_102958353_102965120_1	chr3	+	1631	6	ISM	ENSMUSG00000068823.11	ENSMUST00000197488.5	3827	19	30373	0	30373	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCCTGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	102958352	102965120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUSG00000068823.11_102960126_102965307_1	chr3	+	1704	5	ISM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	32203	0	32146	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAACAATGACAAGGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	102960125	102965307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUSG00000068856.4_96079648_96084383_1	chr3	+	1418	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	0	497	0	-497	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATGGCTACCAGCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	96079647	96084383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
ENSMUSG00000068856.4_96079648_96084420_1	chr3	+	1455	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	0	460	0	-460	multi-exon	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCACTCCACGGCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	96079647	96084420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
ENSMUSG00000068856.4_96079863_96084511_1	chr3	+	1331	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	215	369	215	-369	multi-exon	FALSE	canonical	NA	NA	NA	NA	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTTTATCTTCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	96079862	96084511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
ENSMUSG00000068856.4_96080365_96084695_1	chr3	+	1376	5	ISM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	717	185	717	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTTGTTTGTTCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	96080364	96084695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
ENSMUSG00000068856.4_96080856_96084880_1	chr3	+	1511	4	ISM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	1208	0	1208	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTGATGGGCACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	96080855	96084880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96081400_96081638_96081846_96083950_96084125_96084294
ENSMUSG00000068882.14_69691906_69696637_1	chr2	+	347	3	ISM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	0	5493	0	-4279	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCTTTTTGGTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	69691905	69696637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_69692057_69693567_69693660_69696533
ENSMUSG00000068882.14_69691906_69702190_1	chr2	+	2082	12	NNC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	3649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTCACTTTGGACATA	NA	NA	NA	NA	NA	NA	NA	NA	69691905	69702190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_69692084_69693573_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ENSMUSG00000068882.14_69692030_69697006_1	chr2	+	398	4	ISM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	124	5124	124	-3910	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGGTCCATGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	69692029	69697006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831
ENSMUSG00000068882.14_69700243_69701048_1	chr2	+	342	3	NNC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	6625	132	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTACAGCAGCCCGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	69700242	69701048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_69700365_69700728_69700925_69701024
ENSMUSG00000068882.14_69700294_69701100_1	chr2	+	343	3	NNC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	6676	184	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGCTGGGGCACCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	69700293	69701100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_69700365_69700728_69700925_69701024
ENSMUSG00000068882.14_69700352_69701147_1	chr2	+	332	3	NNC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	6734	231	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATTTGATGATGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	69700351	69701147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_69700365_69700728_69700925_69701024
ENSMUSG00000068882.14_69700789_69701508_1	chr2	+	332	3	NNC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	7171	592	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGCATCAAAGCATAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69700788	69701508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_69700925_69701024_69701178_69701465
ENSMUSG00000068921.15_88829953_88832622_1	chr3	-	1290	2	ISM	ENSMUSG00000068921.15	ENSMUST00000107491.11	1375	12	24636	-989	24636	989	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGCTGGGCCAATG	NA	NA	NA	NA	NA	NA	NA	NA	88832622	88829952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88831221_88832600
ENSMUSG00000068921.15_88830117_88833639_1	chr3	-	1283	3	ISM	ENSMUSG00000068921.15	ENSMUST00000173135.8	1409	13	24849	-1018	23619	825	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTTCTGTGAAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	88833639	88830116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88831221_88832600_88832719_88833578
ENSMUSG00000068921.15_88830276_88835569_1	chr3	-	1267	5	ISM	ENSMUSG00000068921.15	ENSMUST00000173135.8	1409	13	22919	-859	21689	666	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGCTCTTGGCTTCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	88835569	88830275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515
ENSMUSG00000068921.15_88830325_88835621_1	chr3	-	1270	5	ISM	ENSMUSG00000068921.15	ENSMUST00000173135.8	1409	13	22867	-810	21637	617	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCATGCCCAGTGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	88835621	88830324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515
ENSMUSG00000068921.15_88830496_88836762_1	chr3	-	1293	7	ISM	ENSMUSG00000068921.15	ENSMUST00000173135.8	1409	13	21726	-639	20496	446	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACCATCTCATTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	88836762	88830495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702
ENSMUSG00000068921.15_88830606_88837798_1	chr3	-	1270	8	ISM	ENSMUSG00000068921.15	ENSMUST00000173135.8	1409	13	20690	-529	19460	336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTTTTTACTCTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	88837798	88830605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782
ENSMUSG00000068921.15_88830784_88840887_1	chr3	-	1294	10	ISM	ENSMUSG00000068921.15	ENSMUST00000173135.8	1409	13	17601	-351	16371	158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCGAATTCCTAATAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	88840887	88830783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871
ENSMUSG00000068921.15_88831069_88857235_1	chr3	-	1315	13	FSM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	486	2959	23	66	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCCAAGGTTCCAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	88857235	88831068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ENSMUSG00000068921.15_88832643_88857382_1	chr3	-	1268	12	ISM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	339	4533	-124	-1508	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGTACTACTTAGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	88857382	88832642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ENSMUSG00000068921.15_88832694_88857434_1	chr3	-	1269	12	ISM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	287	4584	-176	-1559	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCCATCCTCATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	88857434	88832693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ENSMUSG00000068921.15_88833597_88857578_1	chr3	-	1370	11	ISM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	143	5487	143	-2462	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGCTGCTGGGAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	88857578	88833596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ENSMUSG00000068922.15_88817146_88817697_1	chr3	-	259	3	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	3609	224	3541	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGAGCTCAGCAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	88817697	88817145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88817218_88817436_88817547_88817620
ENSMUSG00000068922.15_88817482_88818002_1	chr3	-	240	3	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	3304	560	3236	-560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCAGAAAGGGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	88818002	88817481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88817547_88817620_88817726_88817932
ENSMUSG00000068922.15_88817533_88818059_1	chr3	-	246	3	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	3247	611	3179	-611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGACTCCCTGCAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	88818059	88817532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88817547_88817620_88817726_88817932
ENSMUSG00000068922.15_88817688_88818207_1	chr3	-	241	3	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	3099	766	3031	-766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCATGCGCCTCTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	88818207	88817687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88817726_88817932_88818118_88818189
ENSMUSG00000068922.15_88817999_88818611_1	chr3	-	269	3	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	2695	1077	2627	-1077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGACATCGGTGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	88818611	88817998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88818118_88818189_88818322_88818593
ENSMUSG00000068922.15_88818060_88818661_1	chr3	-	258	3	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	2645	1138	2577	-1138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCTGACGCAGCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	88818661	88818059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88818118_88818189_88818322_88818593
ENSMUSG00000068922.15_88818274_88818890_1	chr3	-	248	3	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	2416	1352	2348	-1352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTGACTGTTCCCTATCG	NA	NA	NA	NA	NA	NA	NA	NA	88818890	88818273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88818322_88818593_88818747_88818843
ENSMUSG00000068922.15_88819378_88820224_1	chr3	-	243	4	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	1082	2456	1014	-2456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCACGGAGCATCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	88820224	88819377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88819421_88819543_88819608_88820009_88820086_88820164
ENSMUSG00000068922.15_88819566_88820929_1	chr3	-	244	4	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	377	2644	309	-2644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAATATCCAAAATGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	88820929	88819565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88819608_88820009_88820086_88820164_88820235_88820873
ENSMUSG00000068922.15_88820197_88821189_1	chr3	-	264	3	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	117	3275	49	-3275	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACCGACAGCTAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	88821189	88820196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88820235_88820873_88821010_88821099
ENSMUSG00000068922.15_88820974_88821306_1	chr3	-	243	2	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	0	4052	0	-4052	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCCAGGCGAGCTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	88821306	88820973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_88821010_88821099
ENSMUSG00000069045.12_1263067_1265070_1	chrY	-	747	5	ISM	ENSMUSG00000069045.12	ENSMUST00000091190.12	4600	17	21559	2296	17872	-122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCTAAACAGCATTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	1265070	1263066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrY_-_1263368_1263569_1263701_1263795_1263950_1264840_1264959_1265027
ENSMUSG00000069045.12_1263130_1265117_1	chrY	-	731	5	ISM	ENSMUSG00000069045.12	ENSMUST00000091190.12	4600	17	21512	2359	17825	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTATTCAAAGTTGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	1265117	1263129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrY_-_1263368_1263569_1263701_1263795_1263950_1264840_1264959_1265027
ENSMUSG00000069045.12_1263187_1265176_1	chrY	-	733	5	ISM	ENSMUSG00000069045.12	ENSMUST00000091190.12	4600	17	21453	2416	17766	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCTAAAAGTTCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	1265176	1263186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrY_-_1263368_1263569_1263701_1263795_1263950_1264840_1264959_1265027
ENSMUSG00000069045.12_1263303_1265667_1	chrY	-	743	6	ISM	ENSMUSG00000069045.12	ENSMUST00000091190.12	4600	17	20962	2532	17275	347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGGGCAATTGAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	1265667	1263302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrY_-_1263368_1263569_1263701_1263795_1263950_1264840_1264959_1265027_1265210_1265574
ENSMUSG00000069045.12_1263650_1278996_1	chrY	-	1372	11	NNC	ENSMUSG00000069045.12	novel	1702	14	NA	NA	3946	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAATGCTGGATTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	1278996	1263649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrY_-_1263701_1263795_1263950_1264840_1264959_1265027_1265205_1265574_1265720_1265828_1265974_1266358_1266520_1266594_1266694_1267102_1267189_1269704_1269841_1278896
ENSMUSG00000069045.12_1263650_1278996_2	chrY	-	1372	11	NNC	ENSMUSG00000069045.12	novel	1702	14	NA	NA	3946	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAATGCTGGATTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	1278996	1263649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrY_-_1263701_1263795_1263950_1264840_1264959_1265027_1265210_1265574_1265720_1265828_1265974_1266358_1266520_1266594_1266694_1267102_1267189_1269704_1269836_1278896
ENSMUSG00000069045.12_1263650_1278996_3	chrY	-	1370	11	NNC	ENSMUSG00000069045.12	novel	1702	14	NA	NA	3946	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAATGCTGGATTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	1278996	1263649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrY_-_1263701_1263795_1263950_1264840_1264952_1265027_1265210_1265574_1265720_1265828_1265974_1266358_1266520_1266594_1266694_1267102_1267189_1269704_1269841_1278896
ENSMUSG00000069045.12_1263650_1278996_4	chrY	-	1368	11	NNC	ENSMUSG00000069045.12	novel	1702	14	NA	NA	3946	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAATGCTGGATTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	1278996	1263649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrY_-_1263692_1263795_1263950_1264840_1264959_1265027_1265210_1265574_1265720_1265828_1265974_1266358_1266520_1266594_1266694_1267102_1267189_1269704_1269841_1278896
ENSMUSG00000069045.12_1263650_1279440_1	chrY	-	1395	12	ISM	ENSMUSG00000069045.12	ENSMUST00000091190.12	4600	17	7189	2879	3502	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAATGCTGGATTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	1279440	1263649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrY_-_1263701_1263795_1263950_1264840_1264959_1265027_1265210_1265574_1265720_1265828_1265974_1266358_1266520_1266594_1266694_1267102_1267189_1269704_1269841_1278896_1278997_1279422
ENSMUSG00000069045.12_1263650_1279578_1	chrY	-	1533	12	ISM	ENSMUSG00000069045.12	ENSMUST00000091190.12	4600	17	7051	2879	3364	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAATGCTGGATTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	1279578	1263649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrY_-_1263701_1263795_1263950_1264840_1264959_1265027_1265210_1265574_1265720_1265828_1265974_1266358_1266520_1266594_1266694_1267102_1267189_1269704_1269841_1278896_1278997_1279422
ENSMUSG00000069045.12_1263796_1279578_1	chrY	-	1482	11	ISM	ENSMUSG00000069045.12	ENST00000418231.2	1702	14	3364	146	3364	-146	internal_fragment	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCATTGTTTTGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	1279578	1263795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrY_-_1263950_1264840_1264959_1265027_1265210_1265574_1265720_1265828_1265974_1266358_1266520_1266594_1266694_1267102_1267189_1269704_1269841_1278896_1278997_1279422
ENSMUSG00000069045.12_1263796_1279580_1	chrY	-	1479	11	NNC	ENSMUSG00000069045.12	novel	1702	14	NA	NA	3362	-146	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCATTGTTTTGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	1279580	1263795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrY_-_1263950_1264840_1264959_1265027_1265205_1265574_1265720_1265828_1265974_1266358_1266520_1266594_1266694_1267102_1267189_1269704_1269841_1278896_1278997_1279422
ENSMUSG00000069045.12_1263796_1279580_2	chrY	-	1479	11	NNC	ENSMUSG00000069045.12	novel	1702	14	NA	NA	3362	-146	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCATTGTTTTGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	1279580	1263795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrY_-_1263950_1264840_1264959_1265027_1265210_1265574_1265720_1265828_1265974_1266358_1266520_1266594_1266694_1267102_1267189_1269704_1269836_1278896_1278997_1279422
ENSMUSG00000069045.12_1263914_1280340_1	chrY	-	1395	12	ISM	ENSMUSG00000069045.12	ENST00000418231.2	1702	14	2602	264	2602	-264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCACAAAAGATTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	1280340	1263913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrY_-_1263950_1264840_1264959_1265027_1265210_1265574_1265720_1265828_1265974_1266358_1266520_1266594_1266694_1267102_1267189_1269704_1269841_1278896_1278997_1279422_1279579_1280309
ENSMUSG00000069045.12_1264840_1280443_1	chrY	-	1458	11	NNC	ENSMUSG00000069045.12	novel	1702	14	NA	NA	2499	-1190	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCTTTAATGTTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	1280443	1264839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrY_-_1264959_1265027_1265205_1265574_1265720_1265828_1265974_1266358_1266520_1266594_1266694_1267102_1267189_1269704_1269841_1278896_1278997_1279422_1279579_1280309
ENSMUSG00000069045.12_1264902_1282928_1	chrY	-	1425	12	ISM	ENSMUSG00000069045.12	ENST00000418231.2	1702	14	14	1252	14	-1252	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGCGATATTGAAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	1282928	1264901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrY_-_1264959_1265027_1265210_1265574_1265720_1265828_1265974_1266358_1266520_1266594_1266694_1267102_1267189_1269704_1269841_1278896_1278997_1279422_1279579_1280309_1280440_1282900
ENSMUSG00000069089.9_100839139_100840962_1	chr13	-	940	2	ISM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	26485	0	26446	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGTTTATGGACTATT	NA	NA	NA	NA	NA	NA	NA	NA	100840962	100839138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100840015_100840898
ENSMUSG00000069089.9_100839311_100841049_1	chr13	-	855	2	ISM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	26398	172	26359	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGTAAGGTCCTCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	100841049	100839310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100840015_100840898
ENSMUSG00000069089.9_100839527_100846668_1	chr13	-	873	4	ISM	ENSMUSG00000069089.9	ENSMUST00000225990.2	1159	11	20740	-291	20740	291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCACTGCTCATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	100846668	100839526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581
ENSMUSG00000069089.9_100839527_100848104_1	chr13	-	973	5	ISM	ENSMUSG00000069089.9	ENSMUST00000225990.2	1159	11	19304	-291	19304	291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCACTGCTCATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	100848104	100839526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004
ENSMUSG00000069089.9_100839968_100857131_1	chr13	-	869	9	ISM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	10316	829	10277	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTCACTGCTGAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	100857131	100839967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093
ENSMUSG00000069089.9_100840898_100867025_1	chr13	-	947	10	ISM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	422	1759	383	-1080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGATCTCCATTGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	100867025	100840897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965
ENSMUSG00000069089.9_100841028_100867408_1	chr13	-	944	11	ISM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	39	1889	0	-1210	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTAACCGCCCCGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	100867408	100841027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ENSMUSG00000069089.9_100842875_100867408_1	chr13	-	925	10	ISM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	39	3736	0	-3057	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTGCTACTAGAAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	100867408	100842874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ENSMUSG00000069114.9_9316712_9345089_1	chr3	+	1488	4	ISM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	1050	5304	57	-1628	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTCAAATGACTTCAAATT	NA	NA	NA	NA	NA	NA	NA	NA	9316711	9345089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_9317141_9329594_9330481_9343313_9343413_9345015
ENSMUSG00000069114.9_9316755_9345154_1	chr3	+	1510	4	ISM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	1093	5239	100	-1563	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGAATCTTGGCCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	9316754	9345154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_9317141_9329594_9330481_9343313_9343413_9345015
ENSMUSG00000069114.9_9316938_9345822_1	chr3	+	1567	6	FSM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	1276	4571	283	-895	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTGTGTAAGAAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	9316937	9345822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_9317141_9329594_9330481_9343313_9343413_9345015_9345193_9345350_9345524_9345793
ENSMUSG00000069114.9_9317060_9345853_1	chr3	+	1476	6	FSM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	1398	4540	405	-864	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAGTGTTGGAATAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	9317059	9345853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_9317141_9329594_9330481_9343313_9343413_9345015_9345193_9345350_9345524_9345793
ENSMUSG00000069114.9_9317096_9345923_1	chr3	+	1510	6	FSM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	1434	4470	441	-794	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGGACAAGAAGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	9317095	9345923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_9317141_9329594_9330481_9343313_9343413_9345015_9345193_9345350_9345524_9345793
ENSMUSG00000069114.9_9329661_9346002_1	chr3	+	1467	5	NNC	ENSMUSG00000069114.9	novel	7414	6	NA	NA	13006	-715	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGCCCGATGAGGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	9329660	9346002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_9330481_9343313_9343413_9345015_9345182_9345350_9345524_9345793
ENSMUSG00000069114.9_9329729_9346080_1	chr3	+	1488	5	ISM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	14067	4313	13074	-637	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGGATGATTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	9329728	9346080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_9330481_9343313_9343413_9345015_9345193_9345350_9345524_9345793
ENSMUSG00000069114.9_9330132_9346470_1	chr3	+	1475	5	ISM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	14470	3923	13477	-247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACAATGACAGTGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	9330131	9346470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_9330481_9343313_9343413_9345015_9345193_9345350_9345524_9345793
ENSMUSG00000069135.12_8384514_8388958_1	chr17	+	336	5	ISM	ENSMUSG00000069135.12	ENST00000622353.4	2672	11	135	26170	135	-26170	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGGCCAGTGTGGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	8384513	8388958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837
ENSMUSG00000069135.12_8384769_8401080_1	chr17	+	344	5	ISM	ENSMUSG00000069135.12	ENST00000622353.4	2672	11	390	14048	390	-14048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGAGCCAAGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	8384768	8401080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8401059
ENSMUSG00000069135.12_8401202_8411078_1	chr17	+	369	5	ISM	ENSMUSG00000069135.12	ENST00000622353.4	2672	11	16823	4050	16823	-4050	internal_fragment	TRUE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGGAGTAGAGGACGGG	NA	NA	NA	NA	NA	NA	NA	NA	8401201	8411078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016
ENSMUSG00000069135.12_8401272_8411113_1	chr17	+	334	5	ISM	ENSMUSG00000069135.12	ENST00000622353.4	2672	11	16893	4015	16893	-4015	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGGCCACAGTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	8401271	8411113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016
ENSMUSG00000069135.12_8403234_8413506_1	chr17	+	334	5	ISM	ENSMUSG00000069135.12	ENST00000622353.4	2672	11	18855	1622	18855	-1622	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCGCTCCTGCTGGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	8403233	8413506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413490
ENSMUSG00000069135.12_8403284_8413559_1	chr17	+	337	5	ISM	ENSMUSG00000069135.12	ENST00000622353.4	2672	11	18905	1569	18905	-1569	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTTTTCGGTTTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	8403283	8413559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413490
ENSMUSG00000069135.12_8403335_8413613_1	chr17	+	340	5	ISM	ENSMUSG00000069135.12	ENST00000622353.4	2672	11	18956	1515	18956	-1515	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCTTCTGAATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	8403334	8413613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413490
ENSMUSG00000069171.15_78337607_78346490_1	chr13	-	1306	3	FSM	ENSMUSG00000069171.15	ENSMUST00000091458.13	3207	3	1386	515	202	14	multi-exon	FALSE	canonical	NA	NA	NA	NA	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTCGTGTCTGGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	78346490	78337606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_78338133_78343280_78343809_78346238
ENSMUSG00000069171.15_78337607_78346626_1	chr13	-	1376	4	FSM	ENSMUSG00000069171.15	ENST00000615873.1	1428	4	66	-14	66	14	multi-exon	FALSE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTCGTGTCTGGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	78346626	78337606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_78338133_78343280_78343809_78346238_78346543_78346608
ENSMUSG00000069171.15_78337655_78346679_1	chr13	-	1376	4	NNC	ENSMUSG00000069171.15	novel	1428	4	NA	NA	13	-34	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	899	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCATTTAGGATCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	78346679	78337654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_78338133_78343280_78343809_78346238_78346543_78346613
ENSMUSG00000069206.15_67589326_67599699_1	chr13	-	2420	4	FSM	ENSMUSG00000069206.15	ENSMUST00000075255.6	3238	4	44	774	3	-774	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACTCACTGAGCATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	67599699	67589325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_67591454_67596939_67597036_67597468_67597596_67599630
ENSMUSG00000069208.10_74629133_74642089_1	chr13	-	570	5	FSM	ENSMUSG00000069208.10	ENSMUST00000221173.2	1549	5	22	957	0	-497	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTTTCACAACACAGT	NA	NA	NA	NA	NA	NA	NA	NA	74642089	74629132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968
ENSMUSG00000069255.14_30844044_30895025_1	chr13	+	910	8	FSM	ENSMUSG00000069255.14	ENSMUST00000091672.13	1161	8	62	189	0	-189	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAACACTACCCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	30844043	30895025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659_30892733_30894688
ENSMUSG00000069255.14_30856374_30895214_1	chr13	+	981	6	ISM	ENSMUSG00000069255.14	ENSMUST00000091672.13	1161	8	12392	0	12290	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGTGCAGTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30856373	30895214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659_30892733_30894688
ENSMUSG00000069372.4_57601588_57610427_1	chr18	+	775	3	FSM	ENSMUSG00000069372.4	ENST00000379445.7	790	3	15	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACACAGTAGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	57601587	57610427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_57601909_57605656_57605769_57610085
ENSMUSG00000069456.5_127595829_127649457_1	chr10	+	890	4	Fusion	ENSMUSG00000099009.2_ENSMUSG00000069456.5	novel	2766	4	NA	NA	24	-2251	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTACTGGACTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	127595828	127649457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	Fusion_chr10_+_127596120_127646922_127647182_127648654_127648819_127649281
ENSMUSG00000069520.7_115176647_115183051_1	chr10	-	2253	3	ISM	ENSMUSG00000069520.7	ENSMUST00000219890.2	2949	7	15078	0	15078	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	115183051	115176646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_115178575_115179602_115179813_115182936
ENSMUSG00000069520.7_115177223_115197867_1	chr10	-	2223	6	FSM	ENSMUSG00000069520.7	ENSMUST00000217887.2	3084	6	285	576	262	-576	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAGAGAAATGGCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	115197867	115177222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713
ENSMUSG00000069520.7_115177456_115198102_1	chr10	-	2225	6	FSM	ENSMUSG00000069520.7	ENSMUST00000217887.2	3084	6	50	809	27	-809	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAAGACTGTTGCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	115198102	115177455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713
ENSMUSG00000069520.7_115177518_115198102_1	chr10	-	2163	6	FSM	ENSMUSG00000069520.7	ENSMUST00000217887.2	3084	6	50	871	27	-871	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCCTACGTTCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	115198102	115177517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713
ENSMUSG00000069520.7_115179672_115198102_1	chr10	-	945	6	ISM	ENSMUSG00000069520.7	ENSMUST00000092170.7	3012	7	70	3025	27	-3025	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGGTGTGGCTGGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	115198102	115179671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
ENSMUSG00000069565.13_80100908_80124242_1	chr10	+	2063	12	NNC	ENSMUSG00000069565.13	novel	2092	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTGCTGTCTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80100907	80124242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120379_80121083_80121261_80123295
ENSMUSG00000069565.13_80100908_80124242_3	chr10	+	2062	12	NNC	ENSMUSG00000069565.13	novel	2092	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTGCTGTCTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80100907	80124242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118863_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123295
ENSMUSG00000069565.13_80100908_80124242_4	chr10	+	2061	12	NNC	ENSMUSG00000069565.13	novel	2092	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTGCTGTCTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80100907	80124242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114073_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123295
ENSMUSG00000069565.13_80100908_80124242_6	chr10	+	2059	12	NNC	ENSMUSG00000069565.13	novel	2092	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTGCTGTCTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80100907	80124242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110649_80110704_80113405_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123295
ENSMUSG00000069565.13_80100908_80124242_7	chr10	+	2068	12	NIC	ENSMUSG00000069565.13	novel	2092	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	2152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTGCTGTCTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80100907	80124242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123295
ENSMUSG00000069601.15_69658205_69734885_1	chr10	+	1764	16	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	13961	124806	13961	40534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTCGTGACGGAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	69658204	69734885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69658224_69660147_69660247_69685935_69686035_69703214_69703314_69706831_69707030_69710619_69710719_69713659_69713759_69715722_69715822_69718190_69718389_69720576_69720676_69720968_69721068_69728151_69728350_69729274_69729374_69733870_69733970_69734057_69734157_69734823
ENSMUSG00000069601.15_69685935_69740340_1	chr10	+	1817	16	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	41691	119351	41691	45989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTACAGCTCTCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	69685934	69740340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69686035_69703214_69703314_69706831_69707030_69710619_69710719_69713659_69713759_69715722_69715822_69718190_69718389_69720576_69720676_69720968_69721068_69728151_69728350_69729274_69729374_69733870_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277
ENSMUSG00000069601.15_69703290_69763581_1	chr10	+	1753	17	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	59046	96110	-58035	69230	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAGGTGATGACTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	69703289	69763581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69703314_69706831_69707030_69710619_69710719_69713659_69713759_69715722_69715822_69718190_69718389_69720576_69720676_69720968_69721068_69728151_69728350_69729274_69729374_69733870_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524
ENSMUSG00000069601.15_69706929_69768299_1	chr10	+	1775	17	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	62685	91392	-54396	73948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTCTGGTACCATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	69706928	69768299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69707030_69710619_69710719_69713659_69713759_69715722_69715822_69718190_69718389_69720576_69720676_69720968_69721068_69728151_69728350_69729274_69729374_69733870_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223
ENSMUSG00000069601.15_69713692_69791840_1	chr10	+	1762	17	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	69448	67851	-47633	-59623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAAGTGTACGGCCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	69713691	69791840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69713759_69715722_69715822_69718190_69718389_69720576_69720676_69720968_69721068_69728151_69728350_69729274_69729374_69733870_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223_69768327_69786781_69786889_69791755
ENSMUSG00000069601.15_69715722_69791980_1	chr10	+	1836	16	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	71478	67711	-45603	-59483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTCCCCCGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	69715721	69791980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69715822_69718190_69718389_69720576_69720676_69720968_69721068_69728151_69728350_69729274_69729374_69733870_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223_69768327_69786781_69786889_69791755
ENSMUSG00000069601.15_69718237_69794815_1	chr10	+	1758	16	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	73993	64876	-43088	-56648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCGAGAACGGAGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	69718236	69794815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69718389_69720576_69720676_69720968_69721068_69728151_69728350_69729274_69729374_69733870_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747
ENSMUSG00000069601.15_69718366_69809597_1	chr10	+	1762	17	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	74122	50094	-42959	-41866	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCACAAAGGATTTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	69718365	69809597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69718389_69720576_69720676_69720968_69721068_69728151_69728350_69729274_69729374_69733870_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551
ENSMUSG00000069601.15_69720603_69809717_1	chr10	+	1833	16	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	76359	49974	-40722	-41746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCAGAGGGCGCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	69720602	69809717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69720676_69720968_69721068_69728151_69728350_69729274_69729374_69733870_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551
ENSMUSG00000069601.15_69720632_69809718_1	chr10	+	1805	16	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	76388	49973	-40693	-41745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGAGGGCGCCTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	69720631	69809718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69720676_69720968_69721068_69728151_69728350_69729274_69729374_69733870_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551
ENSMUSG00000069601.15_69728204_69811974_1	chr10	+	1752	15	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	83960	47717	-33121	-39489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGCCGATCACCATGACC	NA	NA	NA	NA	NA	NA	NA	NA	69728203	69811974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69728350_69729274_69729374_69733870_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877
ENSMUSG00000069601.15_69728250_69812031_1	chr10	+	1763	15	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	84006	47660	-33075	-39432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGTACAAGGGGGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	69728249	69812031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69728350_69729274_69729374_69733870_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877
ENSMUSG00000069601.15_69728309_69812076_1	chr10	+	1749	15	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	84065	47615	-33016	-39387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCACAGGTTCGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	69728308	69812076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69728350_69729274_69729374_69733870_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877
ENSMUSG00000069601.15_69729273_69813639_1	chr10	+	1816	15	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	85029	46052	-32052	-37824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGCGAGTGGAAGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	69729272	69813639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69729374_69733870_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542
ENSMUSG00000069601.15_69733961_69814387_1	chr10	+	1712	15	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	89717	45304	-27364	-37076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAAGTTCGTTGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	69733960	69814387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300
ENSMUSG00000069601.15_69733961_69814529_1	chr10	+	1942	14	NIC	ENSMUSG00000069601.15	novel	5886	42	NA	NA	-27364	-36934	intron_retention	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAACTGGGCTACAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	69733960	69814529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300
ENSMUSG00000069601.15_69734899_69815206_1	chr10	+	1730	14	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	90655	44485	-26426	-36257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGACAGCAGCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	69734898	69815206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147
ENSMUSG00000069601.15_69740055_69816148_1	chr10	+	1796	14	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	95811	43543	-21270	-35315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGCCAAAGACAACAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	69740054	69816148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101
ENSMUSG00000069601.15_69768266_69833998_1	chr10	+	1774	13	ISM	ENSMUSG00000069601.15	ENSMUST00000182029.8	3825	19	6631	17637	6303	-17465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGAGCTTCATGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	69768265	69833998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924
ENSMUSG00000069601.15_69786856_69835328_1	chr10	+	1841	13	ISM	ENSMUSG00000069601.15	ENSMUST00000182029.8	3825	19	25221	16307	24893	-16135	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTGAATTTAGTGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	69786855	69835328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184
ENSMUSG00000069601.15_69791788_69837769_1	chr10	+	1793	13	ISM	ENSMUSG00000069601.15	ENSMUST00000182029.8	3825	19	30153	13866	29825	-13694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGCTGGAGACCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	69791787	69837769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752
ENSMUSG00000069601.15_69791924_69837862_1	chr10	+	1750	13	ISM	ENSMUSG00000069601.15	ENSMUST00000182029.8	3825	19	30289	13773	29961	-13601	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTAGGACCCCCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	69791923	69837862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752
ENSMUSG00000069601.15_69794810_69837982_1	chr10	+	1751	12	ISM	ENSMUSG00000069601.15	ENSMUST00000182029.8	3825	19	33175	13653	32847	-13481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGACGATTCTGTAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	69794809	69837982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752
ENSMUSG00000069601.15_69809629_69840554_1	chr10	+	1866	13	ISM	ENSMUSG00000069601.15	ENSMUST00000182692.8	3833	21	48304	19233	47666	-10909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCCGGAATCCCAAAACGA	NA	NA	NA	NA	NA	NA	NA	NA	69809628	69840554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838062_69838340_69838432_69840439
ENSMUSG00000069601.15_69814301_69859696_1	chr10	+	1814	12	ISM	ENSMUSG00000069601.15	ENSMUST00000182692.8	3833	21	52976	91	52338	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGAGATCAGCAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	69814300	69859696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838062_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ENSMUSG00000069631.15_106054403_106058663_1	chr11	-	641	2	ISM	ENSMUSG00000069631.15	ENST00000640397.1	864	9	19315	-453	5539	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCACCAGGTCAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	106058663	106054402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106055018_106058637
ENSMUSG00000069631.15_106054403_106062061_1	chr11	-	1381	7	ISM	ENSMUSG00000069631.15	ENSMUST00000007444.14	2099	13	22301	226	2141	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCACCAGGTCAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	106062061	106054402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981
ENSMUSG00000069631.15_106054461_106058714_1	chr11	-	634	2	ISM	ENSMUSG00000069631.15	ENST00000640397.1	864	9	19264	-395	5488	146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGGACAAGTCCTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	106058714	106054460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106055018_106058637
ENSMUSG00000069631.15_106054536_106058744_1	chr11	-	589	2	ISM	ENSMUSG00000069631.15	ENST00000640397.1	864	9	19234	-320	5458	71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACATCCTCTTCCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	106058744	106054535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106055018_106058637
ENSMUSG00000069631.15_106054674_106055787_1	chr11	-	629	3	ISM	ENSMUSG00000069631.15	ENSMUST00000103072.10	1517	11	28601	0	8415	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCACCAGGGACTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	106055787	106054673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106055018_106055256_106055300_106055545
ENSMUSG00000069631.15_106054674_106062097_1	chr11	-	1055	7	ISM	ENSMUSG00000069631.15	ENST00000638888.1	1509	12	15911	67	2105	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCACCAGGGACTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	106062097	106054673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106055018_106055256_106055300_106055636_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981
ENSMUSG00000069631.15_106054674_106078008_1	chr11	-	1446	10	ISM	ENSMUSG00000069631.15	ENST00000638708.1	2097	11	6404	532	0	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCACCAGGGACTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	106078008	106054673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077926
ENSMUSG00000069631.15_106054856_106062097_1	chr11	-	507	4	ISM	ENSMUSG00000069631.15	ENST00000640397.1	864	9	15881	0	2105	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCCTCCAGCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	106062097	106054855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106055018_106058637_106058743_106061779_106061904_106061981
ENSMUSG00000069631.15_106054856_106084388_1	chr11	-	1359	11	FSM	ENSMUSG00000069631.15	ENST00000638708.1	2097	11	24	714	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCCTCCAGCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	106084388	106054855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077926_106078007_106084291
ENSMUSG00000069631.15_106054913_106062097_1	chr11	-	622	5	ISM	ENSMUSG00000069631.15	ENST00000640679.1	1767	11	22252	702	2105	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGTGACAAACCTAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	106062097	106054912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106055018_106058637_106058743_106059134_106059307_106061779_106061904_106061981
ENSMUSG00000069631.15_106054913_106064607_1	chr11	-	1034	9	ISM	ENSMUSG00000069631.15	ENST00000638888.1	1509	12	13401	306	-405	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGTGACAAACCTAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	106064607	106054912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106055018_106055256_106055300_106055636_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504
ENSMUSG00000069631.15_106055504_106084388_1	chr11	-	1082	9	FSM	ENSMUSG00000069631.15	ENST00000579340.5	1078	9	-3	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAGGGGCTGCAGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	106084388	106055503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_106055788_106058637_106058743_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106075387_106075446_106077926_106078007_106084291
ENSMUSG00000069631.15_106055635_106075445_1	chr11	-	975	9	ISM	ENSMUSG00000069631.15	ENST00000638888.1	1509	12	2563	1028	2533	-130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCGCCTTCCCACCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	106075445	106055634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106071780_106071810_106075387
ENSMUSG00000069631.15_106055635_106078008_1	chr11	-	1028	9	ISM	ENSMUSG00000069631.15	ENST00000638276.1	1536	12	6341	1028	0	-130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCGCCTTCCCACCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	106078008	106055634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106075387_106075446_106077926
ENSMUSG00000069631.15_106055738_106084362_1	chr11	-	994	10	ISM	ENSMUSG00000069631.15	ENST00000638276.1	1536	12	-13	1131	0	-233	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCCCTGCCGAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	106084362	106055737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106075387_106075446_106077926_106078007_106084291
ENSMUSG00000069631.15_106058637_106064202_1	chr11	-	626	5	FSM	ENSMUSG00000069631.15	ENST00000617949.4	626	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTGCCGTCAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	106064202	106058636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_106058734_106059134_106059307_106061779_106061904_106061981_106062091_106064078
ENSMUSG00000069631.15_106059301_106078006_1	chr11	-	631	8	ISM	ENSMUSG00000069631.15	ENST00000638888.1	1509	12	2	4694	2	-664	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGCCAGCCACATTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	106078006	106059300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106071780_106071810_106075387_106075446_106077926
ENSMUSG00000069631.15_106064088_106084362_1	chr11	-	343	4	ISM	ENSMUSG00000069631.15	ENSMUST00000103072.10	1517	11	26	9414	0	-5451	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGCAGGTAATGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	106084362	106064087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106064201_106064504_106064608_106077950_106078007_106084291
ENSMUSG00000069662.6_37010933_37014615_1	chr10	-	2185	2	FSM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	301	1562	301	-1562	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATAGAGCTGGAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	37014615	37010932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_37012932_37014429
ENSMUSG00000069729.15_5293153_5382817_1	chr17	+	1810	11	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	52	11371	52	-10963	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGACATGTACAACCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	5293152	5382817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5293347_5314306_5314397_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761
ENSMUSG00000069729.15_5293195_5382880_1	chr17	+	1831	11	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	94	11308	94	-10900	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTCCCTATGGAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	5293194	5382880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5293347_5314306_5314397_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761
ENSMUSG00000069729.15_5293297_5385291_1	chr17	+	1814	12	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	196	8897	196	-8489	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCGTATGGAGGACACCAG	NA	NA	NA	NA	NA	NA	NA	NA	5293296	5385291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5293347_5314306_5314397_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238
ENSMUSG00000069729.15_5314307_5386854_1	chr17	+	1863	12	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	21206	7334	21206	-6926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACATGTACAACATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	5314306	5386854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5314397_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799
ENSMUSG00000069729.15_5341308_5386969_1	chr17	+	1811	11	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	48207	7219	48207	-6811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAGAGAAAGGATGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	5341307	5386969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799
ENSMUSG00000069729.15_5341410_5387061_1	chr17	+	1801	11	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	48309	7127	48309	-6719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGCCTCAGCAGAACATG	NA	NA	NA	NA	NA	NA	NA	NA	5341409	5387061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799
ENSMUSG00000069729.15_5356025_5387203_1	chr17	+	1793	10	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	62924	6985	62924	-6577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAATCACGAGAGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	5356024	5387203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799
ENSMUSG00000069729.15_5356078_5387261_1	chr17	+	1798	10	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	62977	6927	62977	-6519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCGGCCTCCATGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	5356077	5387261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799
ENSMUSG00000069729.15_5356118_5387323_1	chr17	+	1820	10	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	63017	6865	63017	-6457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGCCAAACCACATCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	5356117	5387323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799
ENSMUSG00000069729.15_5362194_5387445_1	chr17	+	1806	9	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	69093	6743	69093	-6335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCCCCACATCCCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	5362193	5387445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799
ENSMUSG00000069729.15_5364269_5387583_1	chr17	+	1798	8	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	71168	6605	71168	-6197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATTTGAAAGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	5364268	5387583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799
ENSMUSG00000069729.15_5368916_5389621_1	chr17	+	1890	8	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	75815	4567	75815	-4159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGCAGCTGCACACAGC	NA	NA	NA	NA	NA	NA	NA	NA	5368915	5389621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490
ENSMUSG00000069729.15_5369063_5391696_1	chr17	+	1802	9	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	75962	2492	75962	-2084	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAATTCTTATGGAATATG	NA	NA	NA	NA	NA	NA	NA	NA	5369062	5391696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ENSMUSG00000069729.15_5371598_5391818_1	chr17	+	1811	8	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	78497	2370	78497	-1962	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCTTGTGGAAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	5371597	5391818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ENSMUSG00000069729.15_5371639_5391880_1	chr17	+	1832	8	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	78538	2308	78538	-1900	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGGGGAAGAGCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	5371638	5391880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ENSMUSG00000069729.15_5377574_5392018_1	chr17	+	1833	7	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	84473	2170	84473	-1762	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGACAAGCTGGGCCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	5377573	5392018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ENSMUSG00000069729.15_5377641_5392053_1	chr17	+	1801	7	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	84540	2135	84540	-1727	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCTCCTCCACTGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	5377640	5392053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ENSMUSG00000069729.15_5382782_5392326_1	chr17	+	1832	5	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	89681	1862	89681	-1454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATCCAGCAGGCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5382781	5392326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ENSMUSG00000069729.15_5382849_5392373_1	chr17	+	1812	5	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	89748	1815	89748	-1407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAGCCCAGGAGCCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	5382848	5392373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ENSMUSG00000069729.15_5385237_5392528_1	chr17	+	1905	4	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	92136	1660	92136	-1252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATCCTGGGAAAGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	5385236	5392528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5385336_5386799_5387584_5389490_5389622_5391637
ENSMUSG00000069729.15_5387466_5393198_1	chr17	+	1810	3	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	94365	990	94365	-582	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGCGGCCAAAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	5387465	5393198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5387584_5389490_5389622_5391637
ENSMUSG00000069729.15_5389521_5393342_1	chr17	+	1806	2	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	96420	846	96420	-438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGATTGGGCAGTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	5389520	5393342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5389622_5391637
ENSMUSG00000069729.15_5389579_5393394_1	chr17	+	1800	2	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	96478	794	96478	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGGGTCACATATAACT	NA	NA	NA	NA	NA	NA	NA	NA	5389578	5393394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_5389622_5391637
ENSMUSG00000069744.8_97594225_97604326_1	chr11	+	759	6	NNC	ENSMUSG00000069744.8	novel	766	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3615	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGCCTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	97594224	97604326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603269_97603358_97604218
ENSMUSG00000069744.8_97594225_97604326_2	chr11	+	761	6	NNC	ENSMUSG00000069744.8	novel	766	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGCCTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	97594224	97604326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603353_97604218
ENSMUSG00000069744.8_97594225_97604326_3	chr11	+	759	6	NNC	ENSMUSG00000069744.8	novel	766	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGCCTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	97594224	97604326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_97594317_97594613_97594799_97597630_97597732_97601927_97602106_97603262_97603358_97604218
ENSMUSG00000069744.8_97594613_97604326_1	chr11	+	667	5	NNC	ENSMUSG00000069744.8	novel	766	6	NA	NA	388	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1916	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGCCTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	97594612	97604326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604226
ENSMUSG00000069744.8_97594613_97604327_1	chr11	+	665	5	NNC	ENSMUSG00000069744.8	novel	766	6	NA	NA	388	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGCCTGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	97594612	97604327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_97594788_97597623_97597732_97601927_97602106_97603262_97603358_97604218
ENSMUSG00000069744.8_97594688_97604327_1	chr11	+	590	5	NNC	ENSMUSG00000069744.8	novel	766	6	NA	NA	463	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGCCTGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	97594687	97604327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_97594799_97597623_97597732_97601927_97602106_97603262_97603347_97604218
ENSMUSG00000069744.8_97594688_97604327_2	chr11	+	594	5	NNC	ENSMUSG00000069744.8	novel	766	6	NA	NA	463	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGCCTGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	97594687	97604327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_97594799_97597630_97597732_97601927_97602106_97603262_97603358_97604218
ENSMUSG00000069744.8_97594688_97604327_3	chr11	+	589	5	NNC	ENSMUSG00000069744.8	novel	766	6	NA	NA	463	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGCCTGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	97594687	97604327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_97594799_97597623_97597720_97601927_97602106_97603262_97603358_97604218
ENSMUSG00000069744.8_97594688_97604327_4	chr11	+	593	5	NNC	ENSMUSG00000069744.8	novel	766	6	NA	NA	463	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGCCTGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	97594687	97604327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604226
ENSMUSG00000069755.6_20948798_20952660_1	chr12	-	2265	2	FSM	ENSMUSG00000069755.6	ENSMUST00000079237.7	2488	2	0	223	0	-223	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTAATGTGGCAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	20952660	20948797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_20950936_20952533
ENSMUSG00000069769.14_88233644_88239642_1	chr11	-	1891	3	ISM	ENSMUSG00000069769.14	ENST00000674964.1	6434	14	369469	3436	65176	1071	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTAAAATGTGATATT	NA	NA	NA	NA	NA	NA	NA	NA	88239642	88233643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_88235429_88237878_88237952_88239609
ENSMUSG00000069769.14_88233767_88239757_1	chr11	-	1883	3	ISM	ENSMUSG00000069769.14	ENST00000674964.1	6434	14	369354	3559	65061	948	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTTAACTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	88239757	88233766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_88235429_88237878_88237952_88239609
ENSMUSG00000069769.14_88234304_88607400_1	chr11	-	1938	11	ISM	ENSMUSG00000069769.14	ENST00000674964.1	6434	14	1711	4096	1527	411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACATATTTAAAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88607400	88234303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_88235429_88237878_88237952_88239609_88239765_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88480880_88480974_88603263_88603306_88607335
ENSMUSG00000069769.14_88234941_88609737_1	chr11	-	1628	14	FSM	ENSMUSG00000069769.14	ENST00000416426.6	1719	14	55	36	55	-36	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCGAAGTTGTGATACGC	NA	NA	NA	NA	NA	NA	NA	NA	88609737	88234940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_88235487_88237878_88237952_88239609_88239819_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88480880_88480974_88603263_88603306_88607335_88607421_88608115_88608198_88608530_88608572_88609665
ENSMUSG00000069769.14_88272403_88304817_1	chr11	-	342	4	FSM	ENSMUSG00000069769.14	ENST00000674898.1	334	4	1	-9	1	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATCACGGACATGCT	NA	NA	NA	NA	NA	NA	NA	NA	88304817	88272402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_88272471_88276870_88276946_88285390_88285506_88304733
ENSMUSG00000069793.13_82872068_82873473_1	chr11	-	1239	2	ISM	ENSMUSG00000069793.13	ENST00000526861.5	2629	4	5621	1	5621	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAACATCTGTATATTCT	NA	NA	NA	NA	NA	NA	NA	NA	82873473	82872067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82872813_82872979
ENSMUSG00000069793.13_82872168_82873542_1	chr11	-	1208	2	ISM	ENSMUSG00000069793.13	ENST00000526861.5	2629	4	5552	101	5552	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTCAGGACTGGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	82873542	82872167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82872813_82872979
ENSMUSG00000069793.13_82872414_82875421_1	chr11	-	1162	3	ISM	ENSMUSG00000069793.13	ENST00000526861.5	2629	4	3673	347	3673	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATCAGGCACCTATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	82875421	82872413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82872813_82872979_82873704_82875382
ENSMUSG00000069793.13_82872462_82875474_1	chr11	-	1167	3	ISM	ENSMUSG00000069793.13	ENST00000526861.5	2629	4	3620	395	3620	-395	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTCAAGAGTCCCTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	82875474	82872461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82872813_82872979_82873704_82875382
ENSMUSG00000069793.13_82872620_82878186_1	chr11	-	1168	4	FSM	ENSMUSG00000069793.13	ENST00000526861.5	2629	4	908	553	908	-553	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCAGACCAGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	82878186	82872619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_82872813_82872979_82873704_82875382_82875512_82878064
ENSMUSG00000069793.13_82872668_82878240_1	chr11	-	1174	4	FSM	ENSMUSG00000069793.13	ENST00000526861.5	2629	4	854	601	854	-601	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCGAGGAATGAAAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	82878240	82872667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_82872813_82872979_82873704_82875382_82875512_82878064
ENSMUSG00000069793.13_82872810_82878289_1	chr11	-	1081	4	FSM	ENSMUSG00000069793.13	ENST00000526861.5	2629	4	805	743	805	-743	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATCTGCCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	82878289	82872809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_82872813_82872979_82873704_82875382_82875512_82878064
ENSMUSG00000069793.13_82872979_82878465_1	chr11	-	1255	3	ISM	ENSMUSG00000069793.13	ENST00000526861.5	2629	4	629	912	629	-912	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTTTGAATCTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	82878465	82872978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82873704_82875382_82875512_82878064
ENSMUSG00000069793.13_82873043_82878438_1	chr11	-	1158	3	NNC	ENSMUSG00000069793.13	novel	2629	4	NA	NA	656	-976	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACTGTGAAACAGATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	82878438	82873042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_82873704_82875382_82875516_82878074
ENSMUSG00000069793.13_82873183_82878574_1	chr11	-	1160	3	ISM	ENSMUSG00000069793.13	ENST00000526861.5	2629	4	520	1116	520	-1116	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATCTTCTCACAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	82878574	82873182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82873704_82875382_82875512_82878064
ENSMUSG00000069793.13_82875383_82879091_1	chr11	-	1156	2	ISM	ENSMUSG00000069793.13	ENST00000526861.5	2629	4	3	3316	3	-3316	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACGGACAGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	82879091	82875382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_82875512_82878064
ENSMUSG00000069808.14_76092841_76100243_1	chr11	+	2126	5	NNC	ENSMUSG00000069808.14	novel	2130	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTATGTGCCCTGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	76092840	76100243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_76093082_76093382_76093462_76096079_76096282_76097953_76098050_76098735
ENSMUSG00000069808.14_76092841_76100243_2	chr11	+	2125	5	NNC	ENSMUSG00000069808.14	novel	2130	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTATGTGCCCTGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	76092840	76100243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_76093082_76093377_76093462_76096079_76096282_76097953_76098050_76098741
ENSMUSG00000069833.14_8966659_9054078_1	chr19	+	824	6	NNC	ENSMUSG00000069833.14	novel	830	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGAGGTGGCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	8966658	9054078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_8966794_8977025_8977137_8977469_8977621_8978039_8978228_9014522_9014623_9053939
ENSMUSG00000069844.13_66944601_66954902_1	chr11	+	666	5	NNC	ENSMUSG00000069844.13	novel	2412	6	NA	NA	8	-36	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1831	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGGAAGCTTTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66944600	66954902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_66944692_66946556_66946755_66947340_66947427_66949152_66949273_66954731
ENSMUSG00000069844.13_66944601_66954902_2	chr11	+	661	5	NNC	ENSMUSG00000069844.13	novel	631	5	NA	NA	8	-36	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2238	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGGAAGCTTTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66944600	66954902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_66944692_66946564_66946755_66947344_66947434_66949152_66949273_66954731
ENSMUSG00000069844.13_66944601_66954902_3	chr11	+	669	5	ISM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	1105	1496	8	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGGAAGCTTTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66944600	66954902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
ENSMUSG00000069844.13_66946621_66949204_1	chr11	+	186	3	ISM	ENSMUSG00000069844.13	ENST00000577427.1	516	4	59	5734	59	-5652	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGCCAGAGCATACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	66946620	66949204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_66946662_66947340_66947434_66949152
ENSMUSG00000069910.3_34700017_34721612_1	chr11	-	2237	11	ISM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	2856	0	2856	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTGTATTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	34721612	34700016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551
ENSMUSG00000069910.3_34700017_34721726_1	chr11	-	2351	11	ISM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	2742	0	2742	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTGTATTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	34721726	34700016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551
ENSMUSG00000069910.3_34700169_34724419_1	chr11	-	2304	12	FSM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	49	152	49	-152	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTCTTGTAAAAATAATG	NA	NA	NA	NA	NA	NA	NA	NA	34724419	34700168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
ENSMUSG00000069917.8_32246837_32247300_1	chr11	+	330	2	ISM	ENSMUSG00000069917.8	ENSMUST00000093207.4	554	3	348	-2	348	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTGCATGCCTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	32246836	32247300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_32246946_32247079
ENSMUSG00000070000.14_72161569_72166192_1	chr8	-	1572	12	NNC	ENSMUSG00000070000.14	novel	2570	22	NA	NA	4831	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	868	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTGCTGCCCTTTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	72166192	72161568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165629_72166058
ENSMUSG00000070000.14_72161585_72166177_1	chr8	-	1533	13	ISM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	4846	15	4846	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATTCGCTACAGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	72166177	72161584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058
ENSMUSG00000070000.14_72161594_72166220_1	chr8	-	1558	12	NNC	ENSMUSG00000070000.14	novel	2570	22	NA	NA	4803	-24	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAAGCGGAGATTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	72166220	72161593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165612_72166058
ENSMUSG00000070000.14_72161614_72166239_1	chr8	-	1566	12	NNC	ENSMUSG00000070000.14	novel	2570	22	NA	NA	4784	-44	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGCTACCGCATGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	72166239	72161613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165621_72166058
ENSMUSG00000070000.14_72161653_72166258_1	chr8	-	1540	12	NNC	ENSMUSG00000070000.14	novel	2570	22	NA	NA	4765	-83	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGCCACGCTGTCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	72166258	72161652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72166039
ENSMUSG00000070000.14_72161973_72167418_1	chr8	-	1598	13	ISM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	3605	403	3605	-403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCACAGCTCTGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	72167418	72161972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166317_72167343
ENSMUSG00000070000.14_72162333_72168220_1	chr8	-	1561	13	NNC	ENSMUSG00000070000.14	novel	2570	22	NA	NA	2803	-763	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGCTACCGTGCGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	72168220	72162332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165612_72166058_72166317_72167343_72167417_72167526_72167572_72168120
ENSMUSG00000070000.14_72162333_72168220_3	chr8	-	1570	14	ISM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	2803	763	2803	-763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGCTACCGTGCGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	72168220	72162332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166317_72167343_72167417_72167526_72167572_72168120
ENSMUSG00000070000.14_72162718_72169279_1	chr8	-	1587	14	NNC	ENSMUSG00000070000.14	novel	2570	22	NA	NA	1744	-1148	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGACGGAGGCCCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	72169279	72162717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165629_72166058_72166317_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200
ENSMUSG00000070000.14_72162721_72169279_1	chr8	-	1576	15	ISM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	1744	1151	1744	-1151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCGCTGACGGAGGCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	72169279	72162720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166317_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200
ENSMUSG00000070000.14_72163026_72169514_1	chr8	-	1608	15	ISM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	1509	1456	1509	-1456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1604	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGTAGAACACTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	72169514	72163025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166317_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415
ENSMUSG00000070000.14_72163052_72169495_1	chr8	-	1571	14	NNC	ENSMUSG00000070000.14	novel	2570	22	NA	NA	1528	-1482	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCTTCCGGCTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	72169495	72163051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165629_72166058_72166317_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415
ENSMUSG00000070000.14_72163055_72169473_1	chr8	-	1532	14	NNC	ENSMUSG00000070000.14	novel	2570	22	NA	NA	1550	-1485	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTCAGCTTCCGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	72169473	72163054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72166039_72166317_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415
ENSMUSG00000070000.14_72163076_72169499_1	chr8	-	1534	14	NNC	ENSMUSG00000070000.14	novel	2570	22	NA	NA	1524	-1506	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCACCCCACCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	72169499	72163075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165612_72166058_72166317_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415
ENSMUSG00000070000.14_72163714_72169836_1	chr8	-	1519	14	NNC	ENSMUSG00000070000.14	novel	2570	22	NA	NA	1187	-2144	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGACGCCCTGCCCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	72169836	72163713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165612_72166058_72166317_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785
ENSMUSG00000070000.14_72164107_72170975_1	chr8	-	1552	14	NNC	ENSMUSG00000070000.14	novel	2570	22	NA	NA	48	-2537	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGCCACACTGAGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	72170975	72164106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_72164144_72164694_72164938_72165113_72165209_72165543_72165629_72166058_72166317_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930
ENSMUSG00000070000.14_72164110_72170971_1	chr8	-	1537	15	ISM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	52	2540	52	-2540	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCTGCCACACTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	72170971	72164109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166317_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930
ENSMUSG00000070002.8_71038469_71045054_1	chr8	+	1395	5	ISM	ENSMUSG00000070002.8	ENSMUST00000093454.8	3072	12	46131	454	46131	-454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGGGGCAGGACCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	71038468	71045054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ENSMUSG00000070003.8_71050141_71051559_1	chr8	-	617	5	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	9405	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	71051559	71050140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_71050419_71050662_71050771_71051163_71051268_71051351_71051423_71051503
ENSMUSG00000070003.8_71050162_71051789_1	chr8	-	657	8	ISM	ENSMUSG00000070003.8	ENSMUST00000049908.11	1475	17	9175	22	9175	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGCCATTCCGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	71051789	71050161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767
ENSMUSG00000070003.8_71050342_71052260_1	chr8	-	658	10	ISM	ENSMUSG00000070003.8	ENSMUST00000049908.11	1475	17	8704	202	8704	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCACCCCTGCCATCCGG	NA	NA	NA	NA	NA	NA	NA	NA	71052260	71050341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174
ENSMUSG00000070003.8_71051210_71054900_1	chr8	-	647	11	ISM	ENSMUSG00000070003.8	ENSMUST00000049908.11	1475	17	6064	1070	6064	-1069	internal_fragment	TRUE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACGTGAACGGATCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	71054900	71051209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881
ENSMUSG00000070003.8_71051642_71055296_1	chr8	-	665	10	ISM	ENSMUSG00000070003.8	ENSMUST00000049908.11	1475	17	5668	1502	5668	-1501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCCCTGCTGGTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	71055296	71051641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223
ENSMUSG00000070003.8_71052080_71060925_1	chr8	-	677	9	ISM	ENSMUSG00000070003.8	ENSMUST00000049908.11	1475	17	39	1940	39	-1939	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCGGCCCCCACCCAACTC	NA	NA	NA	NA	NA	NA	NA	NA	71060925	71052079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ENSMUSG00000070003.8_71052188_71060925_1	chr8	-	649	8	ISM	ENSMUSG00000070003.8	ENSMUST00000049908.11	1475	17	39	2048	39	-2047	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGGCCCCAGGTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	71060925	71052187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ENSMUSG00000070044.16_45791796_45795499_1	chr8	-	894	4	ISM	ENSMUSG00000070044.16	ENSMUST00000093526.13	5469	14	39829	2034	39829	-2034	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGATTTTTCATATCTT	NA	NA	NA	NA	NA	NA	NA	NA	45795499	45791795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_45792410_45794019_45794099_45794192_45794322_45795427
ENSMUSG00000070044.16_45792334_45801571_1	chr8	-	818	7	ISM	ENSMUSG00000070044.16	ENSMUST00000093526.13	5469	14	33757	2572	33757	-2572	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGCTTCAGAATTATGG	NA	NA	NA	NA	NA	NA	NA	NA	45801571	45792333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_45792410_45794019_45794099_45794192_45794322_45795427_45795552_45797494_45797699_45798008_45798122_45801478
ENSMUSG00000070044.16_45795482_45803522_1	chr8	-	818	6	ISM	ENSMUSG00000070044.16	ENSMUST00000093526.13	5469	14	31806	5720	31806	-5720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTGAGACTGGGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	45803522	45795481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_45795552_45797494_45797699_45798008_45798122_45801478_45801634_45801987_45802179_45803437
ENSMUSG00000070044.16_45798052_45806950_1	chr8	-	808	6	ISM	ENSMUSG00000070044.16	ENSMUST00000093526.13	5469	14	28378	8290	28378	-8290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACTCCAGCAGAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	45806950	45798051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_45798122_45801478_45801634_45801987_45802179_45803437_45803609_45804699_45804826_45806855
ENSMUSG00000070044.16_45801518_45808377_1	chr8	-	856	6	ISM	ENSMUSG00000070044.16	ENSMUST00000093526.13	5469	14	26951	11756	26951	-11756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCCATCCTTGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	45808377	45801517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_45801634_45801987_45802179_45803437_45803609_45804699_45804826_45806855_45806999_45808268
ENSMUSG00000070044.16_45803502_45834390_1	chr8	-	824	6	ISM	ENSMUSG00000070044.16	ENSMUST00000093526.13	5469	14	938	13740	938	-13740	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGAGGTGTACCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	45834390	45803501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_45803609_45804699_45804826_45806855_45806999_45808268_45808408_45808658_45808767_45834189
ENSMUSG00000070047.15_45442142_45466082_1	chr8	+	829	5	ISM	ENSMUSG00000070047.15	ENSMUST00000189017.8	14651	27	38897	39200	38891	-38364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGCTATAACCTCACCG	NA	NA	NA	NA	NA	NA	NA	NA	45442141	45466082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_45442283_45460278_45460341_45462829_45463163_45463437_45463649_45466000
ENSMUSG00000070047.15_45463118_45470989_1	chr8	+	790	5	ISM	ENSMUSG00000070047.15	ENSMUST00000189017.8	14651	27	59873	34293	59867	-33457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGGCAGCCGTGGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	45463117	45470989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_45463163_45463437_45463649_45466000_45466141_45470401_45470678_45470871
ENSMUSG00000070047.15_45470878_45476508_1	chr8	+	877	2	ISM	ENSMUSG00000070047.15	ENST00000614102.4	14621	26	67636	28773	67627	-27938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCCATCCGTACAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	45470877	45476508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_45471087_45475840
ENSMUSG00000070047.15_45490041_45493660_1	chr8	+	854	4	ISM	ENSMUSG00000070047.15	ENSMUST00000215588.2	13938	29	86790	10786	86790	-10786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCACGCGGTGTCCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	45490040	45493660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_45490515_45491296_45491429_45492836_45492995_45493570
ENSMUSG00000070047.15_45497071_45503962_1	chr8	+	804	3	ISM	ENSMUSG00000070047.15	ENST00000614102.4	14621	26	93829	1319	93820	-484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGACATTGAAAGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	45497070	45503962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_45497592_45498067_45498206_45503817
ENSMUSG00000070056.7_36055664_36144187_1	chr8	+	3280	3	FSM	ENSMUSG00000070056.7	ENSMUST00000037666.6	6408	3	712	2416	712	-2416	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAGTTAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	36055663	36144187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_36058513_36131821_36131949_36143883
ENSMUSG00000070283.5_108442874_108443916_1	chr9	-	731	4	ISM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	717	138	717	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAAGGCTCTGTCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	108443916	108442873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754
ENSMUSG00000070283.5_108442929_108443950_1	chr9	-	710	4	ISM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	683	193	683	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCCAACTTCTTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	108443950	108442928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754
ENSMUSG00000070283.5_108443060_108444109_1	chr9	-	639	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	524	324	524	-324	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGCTCAGTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	108444109	108443059	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
ENSMUSG00000070283.5_108443376_108444449_1	chr9	-	746	4	ISM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	184	640	184	-640	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGGTCCAGGACACGGT	NA	NA	NA	NA	NA	NA	NA	NA	108444449	108443375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108443459_108443539_108443607_108443754_108443951_108444049
ENSMUSG00000070283.5_108443376_108444502_1	chr9	-	799	4	ISM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	131	640	131	-640	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGGTCCAGGACACGGT	NA	NA	NA	NA	NA	NA	NA	NA	108444502	108443375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108443459_108443539_108443607_108443754_108443951_108444049
ENSMUSG00000070283.5_108443782_108444633_1	chr9	-	753	2	ISM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	0	1046	0	-1046	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCACAGACGGTGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	108444633	108443781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_108443951_108444049
ENSMUSG00000070284.11_107926654_107929115_1	chr9	+	1385	7	NNC	ENSMUSG00000070284.11	novel	2216	7	NA	NA	111	214	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCAGTCCTTGTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	107926653	107929115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107928258_107928430_107928524
ENSMUSG00000070284.11_107926654_107929115_2	chr9	+	1397	7	NIC	ENSMUSG00000070284.11	novel	2702	9	NA	NA	111	214	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCAGTCCTTGTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	107926653	107929115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107928258_107928442_107928524
ENSMUSG00000070284.11_107926654_107929535_1	chr9	+	2024	9	FSM	ENSMUSG00000070284.11	ENSMUST00000112295.9	2702	9	213	465	111	-296	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTCGTCTGAGAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	107926653	107929535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ENSMUSG00000070284.11_107926959_107929429_1	chr9	+	1509	6	NNC	ENSMUSG00000070284.11	novel	2216	7	NA	NA	416	-402	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGCAGATGCAGCGGTC	NA	NA	NA	NA	NA	NA	NA	NA	107926958	107929429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107928258_107928430_107928524
ENSMUSG00000070284.11_107926959_107929429_2	chr9	+	1521	6	NIC	ENSMUSG00000070284.11	novel	2702	9	NA	NA	416	-402	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGCAGATGCAGCGGTC	NA	NA	NA	NA	NA	NA	NA	NA	107926958	107929429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107928258_107928442_107928524
ENSMUSG00000070284.11_107926959_107929898_1	chr9	+	2197	8	ISM	ENSMUSG00000070284.11	ENSMUST00000112295.9	2702	9	518	102	416	67	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCCCTATTACTTACCA	NA	NA	NA	NA	NA	NA	NA	NA	107926958	107929898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ENSMUSG00000070284.11_107927649_107930001_1	chr9	+	2027	5	ISM	ENSMUSG00000070284.11	ENSMUST00000112295.9	2702	9	1208	-1	1106	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGTAACTTGGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	107927648	107930001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ENSMUSG00000070284.11_107927677_107929667_1	chr9	+	1458	3	NIC	ENSMUSG00000070284.11	novel	2702	9	NA	NA	1134	-164	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAGGGGCAGGCAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	107927676	107929667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_107927809_107928258_107928442_107928524
ENSMUSG00000070284.11_107927688_107929670_1	chr9	+	1438	3	NNC	ENSMUSG00000070284.11	novel	2216	7	NA	NA	1145	-161	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGGCAGGCAAGGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	107927687	107929670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107927809_107928258_107928430_107928524
ENSMUSG00000070284.11_107927765_107929746_1	chr9	+	1437	3	NNC	ENSMUSG00000070284.11	novel	2216	7	NA	NA	1222	-85	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGGATCAGCCAGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	107927764	107929746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107927809_107928258_107928430_107928524
ENSMUSG00000070284.11_107928317_107929898_1	chr9	+	1487	2	NNC	ENSMUSG00000092218.2	novel	203	2	NA	NA	-557	-5893	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCCCTATTACTTACCA	NA	NA	NA	NA	NA	NA	NA	NA	107928316	107929898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107928430_107928524
ENSMUSG00000070291.5_78306323_78330940_1	chr9	+	1914	16	NNC	ENSMUSG00000070291.5	novel	1920	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	924	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAAAAGAGAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78306322	78330940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_78306379_78308130_78308258_78309631_78309764_78313632_78313715_78318878_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329112_78330733
ENSMUSG00000070291.5_78306323_78330940_2	chr9	+	1909	16	NNC	ENSMUSG00000070291.5	novel	1920	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAAAAGAGAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78306322	78330940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_78306379_78308130_78308258_78309631_78309764_78313632_78313715_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328989_78329112_78330733
ENSMUSG00000070291.5_78306323_78330940_3	chr9	+	1911	16	NNC	ENSMUSG00000070291.5	novel	1920	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAAAAGAGAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78306322	78330940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_78306379_78308130_78308258_78309631_78309756_78313632_78313715_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329112_78330733
ENSMUSG00000070291.5_78306323_78330940_4	chr9	+	1913	16	NNC	ENSMUSG00000070291.5	novel	1920	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAAAAGAGAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78306322	78330940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_78306379_78308130_78308258_78309631_78309764_78313632_78313715_78318873_78319031_78319474_78319594_78320253_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329112_78330733
ENSMUSG00000070291.5_78306323_78330940_5	chr9	+	1912	16	NNC	ENSMUSG00000070291.5	novel	1920	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAAAAGAGAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78306322	78330940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_78306379_78308130_78308258_78309631_78309764_78313632_78313715_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321512_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329112_78330733
ENSMUSG00000070291.5_78306323_78330940_6	chr9	+	1919	16	FSM	ENSMUSG00000070291.5	ENST00000370336.5	1920	16	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAAAAGAGAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78306322	78330940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_78306379_78308130_78308258_78309631_78309764_78313632_78313715_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329112_78330733
ENSMUSG00000070291.5_78306323_78330940_7	chr9	+	1913	16	NNC	ENSMUSG00000070291.5	novel	1920	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAAAAGAGAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78306322	78330940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_78306379_78308130_78308258_78309631_78309764_78313632_78313715_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326499_78326633_78327870_78327959_78328979_78329112_78330733
ENSMUSG00000070291.5_78306323_78330940_8	chr9	+	1913	16	NNC	ENSMUSG00000070291.5	novel	1920	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAAAAGAGAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78306322	78330940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_78306383_78308140_78308258_78309631_78309764_78313632_78313715_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329112_78330733
ENSMUSG00000070291.5_78306323_78330940_9	chr9	+	1913	16	NNC	ENSMUSG00000070291.5	novel	1920	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	882	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAAAAGAGAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78306322	78330940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_78306379_78308130_78308258_78309631_78309764_78313632_78313715_78318873_78319031_78319480_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329112_78330733
ENSMUSG00000070291.5_78308129_78326630_1	chr9	+	1289	11	FSM	ENSMUSG00000070291.5	ENST00000510713.2	1258	11	-30	-1	-30	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAAGCCAGCTGGGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	78308128	78326630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_78308258_78313632_78313715_78318873_78319031_78319474_78319594_78320249_78320346_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493
ENSMUSG00000070319.7_20805645_20806194_1	chr9	-	267	3	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	3725	0	3725	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	20806194	20805644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_20805739_20805928_20806036_20806128
ENSMUSG00000070319.7_20806136_20807158_1	chr9	-	273	3	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	2761	491	2761	-491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAAGGTGGGTGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	20807158	20806135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_20806266_20806384_20806493_20807123
ENSMUSG00000070319.7_20806201_20807194_1	chr9	-	244	3	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	2725	556	2725	-556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTCTTCCGGCCTTTCGG	NA	NA	NA	NA	NA	NA	NA	NA	20807194	20806200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_20806266_20806384_20806493_20807123
ENSMUSG00000070319.7_20806245_20807253_1	chr9	-	259	3	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	2666	600	2666	-600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCACTAACCTGTCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	20807253	20806244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_20806266_20806384_20806493_20807123
ENSMUSG00000070319.7_20806484_20807516_1	chr9	-	304	3	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	2403	839	2403	-839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGCAGGCCGCCCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	20807516	20806483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_20806493_20807123_20807314_20807411
ENSMUSG00000070319.7_20807171_20809036_1	chr9	-	282	3	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	883	1526	883	-1526	internal_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAGCTCGGCCTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	20809036	20807170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_20807314_20807411_20807517_20809002
ENSMUSG00000070319.7_20807277_20809230_1	chr9	-	249	4	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	689	1632	689	-1632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTAAGGGCCAGAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	20809230	20807276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_20807314_20807411_20807517_20809002_20809063_20809183
ENSMUSG00000070319.7_20809003_20809720_1	chr9	-	280	4	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	199	3358	199	-3358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGATTCTACCTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	20809720	20809002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_20809063_20809183_20809273_20809379_20809464_20809673
ENSMUSG00000070319.7_20809184_20809908_1	chr9	-	289	4	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	11	3539	11	-3539	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGTCGAAGTGGACACA	NA	NA	NA	NA	NA	NA	NA	NA	20809908	20809183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_20809273_20809379_20809464_20809673_20809721_20809839
ENSMUSG00000070348.6_144484475_144487801_1	chr7	-	2083	2	ISM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	5805	807	5712	-807	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAATTTCCTCATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	144487801	144484474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_144486509_144487752
ENSMUSG00000070348.6_144484623_144491099_1	chr7	-	2104	3	ISM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	2507	955	2414	-955	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGGCGCTGCTACCGA	NA	NA	NA	NA	NA	NA	NA	NA	144491099	144484622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_144486509_144487752_144487902_144491030
ENSMUSG00000070348.6_144484690_144491149_1	chr7	-	2087	3	ISM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	2457	1022	2364	-1022	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGCTTAAGAGGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	144491149	144484689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_144486509_144487752_144487902_144491030
ENSMUSG00000070348.6_144484800_144491700_1	chr7	-	2095	4	ISM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	1906	1132	1813	-1132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTCTGGCACATTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	144491700	144484799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623
ENSMUSG00000070348.6_144484850_144491754_1	chr7	-	2099	4	ISM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	1852	1182	1759	-1182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTGGAGAGCCATCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	144491754	144484849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623
ENSMUSG00000070348.6_144484878_144491828_1	chr7	-	2145	4	ISM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	1778	1210	1685	-1210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTGACTTTCCCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	144491828	144484877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623
ENSMUSG00000070348.6_144485122_144493403_1	chr7	-	2083	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	203	1454	110	-1454	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGGAGGCTTTTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	144493403	144485121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ENSMUSG00000070348.6_144485166_144493461_1	chr7	-	2097	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	145	1498	52	-1498	multi-exon	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATTACCTGGACAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	144493461	144485165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ENSMUSG00000070348.6_144485234_144493606_1	chr7	-	2174	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	0	1566	0	-1566	multi-exon	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGATCTGTCCTGCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	144493606	144485233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ENSMUSG00000070348.6_144487745_144493279_1	chr7	-	204	2	FSM	ENSMUSG00000070348.6	ENST00000536559.1	436	2	234	-2	234	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCATCAAAGGAGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	144493279	144487744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_144487902_144493232
ENSMUSG00000070348.6_144487813_144493332_1	chr7	-	189	2	FSM	ENSMUSG00000070348.6	ENST00000536559.1	436	2	181	66	181	-66	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCTCTCCTGCTACCG	NA	NA	NA	NA	NA	NA	NA	NA	144493332	144487812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_144487902_144493232
ENSMUSG00000070348.6_144487867_144493386_1	chr7	-	189	2	FSM	ENSMUSG00000070348.6	ENST00000536559.1	436	2	127	120	127	-120	multi-exon	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGGGAGCGTGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	144493386	144487866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_144487902_144493232
ENSMUSG00000070372.12_104730095_104771738_1	chr3	-	3104	10	NNC	ENSMUSG00000070372.12	novel	3193	10	NA	NA	83	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCTTCCTGAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	104771738	104730094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_104732441_104732722_104732786_104735848_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ENSMUSG00000070372.12_104730095_104771738_2	chr3	-	3105	10	NNC	ENSMUSG00000070372.12	novel	3193	10	NA	NA	83	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCTTCCTGAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	104771738	104730094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747102_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ENSMUSG00000070394.11_69729389_69730444_1	chr11	+	447	4	NNC	ENSMUSG00000070394.11	novel	492	4	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCTTTATTCATC	NA	NA	NA	NA	NA	NA	NA	NA	69729388	69730444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_69729476_69729745_69729778_69730013_69730089_69730191
ENSMUSG00000070425.14_101728250_101738344_1	chr7	+	1779	10	ISM	ENSMUSG00000070425.14	ENST00000451043.6	3125	17	293	7076	293	-7076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTGCGGAGCTACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	101728249	101738344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101728385_101729735_101729812_101730750_101730818_101731247_101731399_101732179_101732226_101733073_101733788_101735604_101735818_101736722_101736888_101737322_101737498_101738307
ENSMUSG00000070425.14_101728310_101738396_1	chr7	+	1771	10	ISM	ENSMUSG00000070425.14	ENST00000451043.6	3125	17	353	7024	353	-7024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCTGTACTTGGCATC	NA	NA	NA	NA	NA	NA	NA	NA	101728309	101738396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101728385_101729735_101729812_101730750_101730818_101731247_101731399_101732179_101732226_101733073_101733788_101735604_101735818_101736722_101736888_101737322_101737498_101738307
ENSMUSG00000070425.14_101728369_101738478_1	chr7	+	1794	10	ISM	ENSMUSG00000070425.14	ENST00000451043.6	3125	17	412	6942	412	-6942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCACCTGCCGCTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	101728368	101738478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101728385_101729735_101729812_101730750_101730818_101731247_101731399_101732179_101732226_101733073_101733788_101735604_101735818_101736722_101736888_101737322_101737498_101738307
ENSMUSG00000070425.14_101730785_101739188_1	chr7	+	1767	9	ISM	ENSMUSG00000070425.14	ENST00000451043.6	3125	17	2828	6232	2828	-6232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTCACCCGACTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	101730784	101739188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101730818_101731247_101731399_101732179_101732226_101733073_101733788_101735604_101735818_101736722_101736888_101737322_101737498_101738307_101738509_101739119
ENSMUSG00000070425.14_101731342_101739798_1	chr7	+	1803	9	ISM	ENSMUSG00000070425.14	ENST00000451043.6	3125	17	3385	5622	3385	-5622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGAATCCGAGAAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	101731341	101739798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101731399_101732179_101732226_101733073_101733788_101735604_101735818_101736722_101736888_101737322_101737498_101738307_101738509_101739119_101739283_101739729
ENSMUSG00000070426.13_101669339_101714365_1	chr7	-	832	5	FSM	ENSMUSG00000070426.13	ENST00000533380.5	846	5	-2	16	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGAATTGTCCCCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	101714365	101669338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101688756_101688899_101714272
ENSMUSG00000070436.13_98994990_98996333_1	chr7	-	836	2	NNC	ENSMUSG00000070436.13	novel	2274	5	NA	NA	4744	-388	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGCAGCCTAGCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	98996333	98994989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_98995630_98996137
ENSMUSG00000070436.13_98996125_98998505_1	chr7	-	835	3	ISM	ENSMUSG00000070436.13	ENST00000530284.5	1039	4	2572	0	2572	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGAGGGTAGTGTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	98998505	98996124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98996365_98996472_98996572_98998009
ENSMUSG00000070436.13_98996287_99002321_1	chr7	-	901	4	ISM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	125	1691	0	-162	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCATCCTCATGCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	99002321	98996286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98996365_98996472_98996572_98998009_98998672_99002259
ENSMUSG00000070436.13_98996321_99001056_1	chr7	-	822	4	FSM	ENSMUSG00000070436.13	ENST00000530284.5	1039	4	21	196	21	-196	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGATGCCCCTGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	99001056	98996320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_98996365_98996472_98996572_98998009_98998663_99001030
ENSMUSG00000070436.13_98996472_99002446_1	chr7	-	949	3	ISM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	0	1876	0	-347	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACGTCTTGCTAGACGGT	NA	NA	NA	NA	NA	NA	NA	NA	99002446	98996471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_98996572_98998009_98998672_99002259
ENSMUSG00000070493.4_129909997_129916115_1	chr5	-	719	4	FSM	ENSMUSG00000070493.4	ENSMUST00000094280.4	915	4	196	0	196	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTAGCGTCCTTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	129916115	129909996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_129910238_129911269_129911421_129912774_129913025_129916038
ENSMUSG00000070493.4_129910158_129916311_1	chr5	-	754	4	FSM	ENSMUSG00000070493.4	ENSMUST00000094280.4	915	4	0	161	0	-161	multi-exon	FALSE	canonical	NA	NA	NA	NA	3718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTAACAGTTCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	129916311	129910157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_129910238_129911269_129911421_129912774_129913025_129916038
ENSMUSG00000070498.4_125699552_125855785_1	chr5	+	1428	5	ISM	ENSMUSG00000070498.4	ENST00000299308.7	3603	9	1	11033	1	-11033	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACTTCCCAGGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	125699551	125855785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125700417_125715245_125715393_125775627_125775815_125826298_125826443_125855700
ENSMUSG00000070498.4_125699868_125860516_1	chr5	+	1356	6	ISM	ENSMUSG00000070498.4	ENST00000299308.7	3603	9	317	6302	317	-6302	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTGACCTACATGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	125699867	125860516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125700417_125715245_125715393_125775627_125775815_125826298_125826443_125855700_125855907_125860393
ENSMUSG00000070498.4_125699931_125860593_1	chr5	+	1370	6	ISM	ENSMUSG00000070498.4	ENST00000299308.7	3603	9	380	6225	380	-6225	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAAAATTGCCCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	125699930	125860593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125700417_125715245_125715393_125775627_125775815_125826298_125826443_125855700_125855907_125860393
ENSMUSG00000070498.4_125700062_125862985_1	chr5	+	1391	7	ISM	ENSMUSG00000070498.4	ENST00000299308.7	3603	9	511	3833	511	-3833	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTACAACTGGTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	125700061	125862985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125700417_125715245_125715393_125775627_125775815_125826298_125826443_125855700_125855907_125860393_125860665_125862904
ENSMUSG00000070498.4_125700132_125863026_1	chr5	+	1362	7	ISM	ENSMUSG00000070498.4	ENST00000299308.7	3603	9	581	3792	581	-3792	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAGGGCAGACAAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	125700131	125863026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125700417_125715245_125715393_125775627_125775815_125826298_125826443_125855700_125855907_125860393_125860665_125862904
ENSMUSG00000070498.4_125700290_125864055_1	chr5	+	1334	8	ISM	ENSMUSG00000070498.4	ENST00000299308.7	3603	9	739	2763	739	-2763	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGATCTCAAGGATTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	125700289	125864055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125700417_125715245_125715393_125775627_125775815_125826298_125826443_125855700_125855907_125860393_125860665_125862904_125863097_125863995
ENSMUSG00000070498.4_125700397_125864184_1	chr5	+	1356	8	ISM	ENSMUSG00000070498.4	ENST00000299308.7	3603	9	846	2634	846	-2634	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAATGTCCATCAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	125700396	125864184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125700417_125715245_125715393_125775627_125775815_125826298_125826443_125855700_125855907_125860393_125860665_125862904_125863097_125863995
ENSMUSG00000070498.4_125715245_125864319_1	chr5	+	1472	7	ISM	ENSMUSG00000070498.4	ENST00000299308.7	3603	9	15694	2499	15694	-2499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACCGGGAGTACAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	125715244	125864319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125715393_125775627_125775815_125826298_125826443_125855700_125855907_125860393_125860665_125862904_125863097_125863995
ENSMUSG00000070498.4_125826296_125864478_1	chr5	+	1299	5	ISM	ENSMUSG00000070498.4	ENST00000299308.7	3603	9	126745	2340	-29408	-2340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAAGCGGGAGCAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	125826295	125864478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125826443_125855700_125855907_125860393_125860665_125862904_125863097_125863995
ENSMUSG00000070498.4_125826325_125864562_1	chr5	+	1354	5	ISM	ENSMUSG00000070498.4	ENST00000299308.7	3603	9	126774	2256	-29379	-2256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCAGGGGGTTAACGGA	NA	NA	NA	NA	NA	NA	NA	NA	125826324	125864562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125826443_125855700_125855907_125860393_125860665_125862904_125863097_125863995
ENSMUSG00000070498.4_125826382_125864606_1	chr5	+	1341	5	ISM	ENSMUSG00000070498.4	ENST00000299308.7	3603	9	126831	2212	-29322	-2212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGTCTTCTGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	125826381	125864606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125826443_125855700_125855907_125860393_125860665_125862904_125863097_125863995
ENSMUSG00000070498.4_125860543_125865035_1	chr5	+	1354	3	ISM	ENSMUSG00000070498.4	ENST00000613307.1	2256	5	4839	1783	4839	-1783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGATGACAGCATCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	125860542	125865035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125860665_125862904_125863097_125863995
ENSMUSG00000070498.4_125862913_125865182_1	chr5	+	1371	2	ISM	ENSMUSG00000070498.4	ENST00000613307.1	2256	5	7209	1636	7209	-1636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAACAGTGGGTCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	125862912	125865182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125863097_125863995
ENSMUSG00000070498.4_125863013_125865268_1	chr5	+	1357	2	ISM	ENSMUSG00000070498.4	ENST00000613307.1	2256	5	7309	1550	7309	-1550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATCAGCAGCCTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	125863012	125865268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_125863097_125863995
ENSMUSG00000070498.4_125864204_125866791_1	chr5	+	1355	2	NNC	ENSMUSG00000070498.4	novel	2256	5	NA	NA	8500	-27	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTGAAGCACATGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	125864203	125866791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_125865479_125866711
ENSMUSG00000070498.4_125864225_125866798_1	chr5	+	1346	2	NNC	ENSMUSG00000070498.4	novel	2256	5	NA	NA	8521	-20	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACATGCAGGAGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	125864224	125866798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_125865479_125866706
ENSMUSG00000070498.4_125864622_125866808_1	chr5	+	959	2	NNC	ENSMUSG00000070498.4	novel	2256	5	NA	NA	8918	-10	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGTCACTGATGTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	125864621	125866808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_125865479_125866706
ENSMUSG00000070498.4_125864713_125866818_1	chr5	+	878	2	NNC	ENSMUSG00000070498.4	novel	2256	5	NA	NA	9009	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTCAAAGGGCTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	125864712	125866818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_125865479_125866706
ENSMUSG00000070509.16_73041128_73067267_1	chr7	+	320	2	FSM	ENSMUSG00000070509.16	ENST00000557420.1	852	2	121	411	121	-411	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGACAGGTGGGCCGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	73041127	73067267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_73041245_73067064
ENSMUSG00000070522.5_28819073_28819509_1	chr3	-	359	2	Genic_Genomic	ENSMUSG00000070522.5	novel	648	1	NA	NA	0	-211	multi-exon	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGACCAAGCGGAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	28819509	28819072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	Genic_Genomic_chr3_-_28819185_28819262
ENSMUSG00000070522.5_28819073_28819509_2	chr3	-	357	2	Genic_Genomic	ENSMUSG00000070522.5	novel	648	1	NA	NA	0	-211	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGACCAAGCGGAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	28819509	28819072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	Genic_Genomic_chr3_-_28819180_28819259
ENSMUSG00000070524.2_170734842_170739849_1	chr1	-	1093	4	NNC	ENSMUSG00000070524.2	novel	1073	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1618	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTGTCTTCTCTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	170739849	170734841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_170735273_170735419_170735566_170736207_170736468_170739593
ENSMUSG00000070524.2_170734842_170739849_2	chr1	-	1141	4	FSM	ENSMUSG00000070524.2	ENST00000336830.9	1114	4	0	-27	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTGTCTTCTCTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	170739849	170734841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_170735273_170735419_170735607_170736200_170736468_170739593
ENSMUSG00000070524.2_170734842_170739849_3	chr1	-	1098	4	NNC	ENSMUSG00000070524.2	novel	1073	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTGTCTTCTCTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	170739849	170734841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_170735273_170735421_170735566_170736200_170736468_170739593
ENSMUSG00000070524.2_170734842_170739849_4	chr1	-	1100	4	FSM	ENSMUSG00000070524.2	ENST00000367946.7	1073	4	0	-27	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTGTCTTCTCTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	170739849	170734841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_170735273_170735419_170735566_170736200_170736468_170739593
ENSMUSG00000070544.7_160487900_160563450_1	chr2	+	2530	21	FSM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	92	1234	92	-1234	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATGAGGACTACGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	160487899	160563450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ENSMUSG00000070544.7_160488001_160563561_1	chr2	+	2540	21	FSM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	193	1123	193	-1123	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGGCCACAAGTCTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	160488000	160563561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ENSMUSG00000070544.7_160488076_160563638_1	chr2	+	2542	21	FSM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	268	1046	268	-1046	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTCCTATGGACAACTT	NA	NA	NA	NA	NA	NA	NA	NA	160488075	160563638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ENSMUSG00000070544.7_160524603_160563914_1	chr2	+	2551	18	ISM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	36795	770	36795	-770	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGAATTTAAAATTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	160524602	160563914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ENSMUSG00000070544.7_160526373_160564018_1	chr2	+	2558	17	ISM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	38565	666	38565	-666	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTGGCAGTGTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	160526372	160564018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ENSMUSG00000070544.7_160529640_160564171_1	chr2	+	2588	16	ISM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	41832	513	41832	-513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTTGGGGTTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	160529639	160564171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ENSMUSG00000070544.7_160535708_160564311_1	chr2	+	2536	14	ISM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	47900	373	47900	-373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCAGTCTTTCATTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	160535707	160564311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ENSMUSG00000070544.7_160540130_160564418_1	chr2	+	2542	13	ISM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	52322	266	52322	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAGGAAAAATAATC	NA	NA	NA	NA	NA	NA	NA	NA	160540129	160564418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ENSMUSG00000070544.7_160544727_160564554_1	chr2	+	2543	12	ISM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	56919	130	56919	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTGTTAGTTAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	160544726	160564554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ENSMUSG00000070544.7_160545490_160564684_1	chr2	+	2658	11	ISM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	57682	0	57682	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCGTCTGCCTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	160545489	160564684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ENSMUSG00000070564.16_45335655_45343712_1	chr7	+	1348	6	FSM	ENSMUSG00000070564.16	ENST00000270235.11	1480	6	53	79	53	-79	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGATGGGCCCGGCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	45335654	45343712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_45336250_45340470_45340660_45340835_45340986_45341307_45341362_45341764_45341846_45343433
ENSMUSG00000070564.16_45335719_45343826_1	chr7	+	1398	6	FSM	ENSMUSG00000070564.16	ENST00000270235.11	1480	6	117	-35	117	-25	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAGGTGTGAGTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	45335718	45343826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_45336250_45340470_45340660_45340835_45340986_45341307_45341362_45341764_45341846_45343433
ENSMUSG00000070691.11_134848135_134903976_1	chr4	+	2387	6	FSM	ENSMUSG00000070691.11	ENSMUST00000056977.14	3884	6	172	1325	127	484	multi-exon	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCCTCCCAGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	134848134	134903976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_134848475_134880098_134880368_134882592_134882750_134890541_134890647_134898419_134898570_134902610
ENSMUSG00000070691.11_134848329_134882653_1	chr4	+	476	3	ISM	ENSMUSG00000070691.11	ENST00000338888.3	1494	7	321	20499	321	-20499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTACTCCGCCGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	134848328	134882653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_134848475_134880098_134880368_134882592
ENSMUSG00000070691.11_134848391_134904232_1	chr4	+	2387	6	FSM	ENSMUSG00000070691.11	ENSMUST00000056977.14	3884	6	428	1069	383	740	multi-exon	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGCAGCATCCAAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	134848390	134904232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_134848475_134880098_134880368_134882592_134882750_134890541_134890647_134898419_134898570_134902610
ENSMUSG00000070691.11_134880115_134904336_1	chr4	+	2391	5	FSM	ENSMUSG00000070691.11	ENSMUST00000119564.2	1855	5	308	-844	308	844	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTTTTTCAAACTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	134880114	134904336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_134880368_134882592_134882750_134890541_134890647_134898419_134898570_134902610
ENSMUSG00000070691.11_134880249_134904403_1	chr4	+	2324	5	FSM	ENSMUSG00000070691.11	ENSMUST00000119564.2	1855	5	442	-911	442	-898	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCACCTGAAACAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	134880248	134904403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_134880368_134882592_134882750_134890541_134890647_134898419_134898570_134902610
ENSMUSG00000070691.11_134880249_134904504_1	chr4	+	2425	5	FSM	ENSMUSG00000070691.11	ENSMUST00000119564.2	1855	5	442	-1012	442	-797	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCCCACCCTTACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	134880248	134904504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_134880368_134882592_134882750_134890541_134890647_134898419_134898570_134902610
ENSMUSG00000070699.6_28441433_28449073_1	chr7	+	880	8	ISM	ENSMUSG00000070699.6	ENST00000221431.11	1557	15	9	3916	6	-3916	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGGCCGGGACGGC	NA	NA	NA	NA	NA	NA	NA	NA	28441432	28449073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28441708_28443666_28443786_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001
ENSMUSG00000070699.6_28441554_28453062_1	chr7	+	1499	15	NNC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	127	73	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCCTGATGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	28441553	28453062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_28441708_28443666_28443763_28446143_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ENSMUSG00000070699.6_28441631_28453130_1	chr7	+	1498	16	FSM	ENSMUSG00000070699.6	ENSMUST00000094632.6	1868	16	204	166	204	141	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGAATTATTGTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	28441630	28453130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ENSMUSG00000070699.6_28443667_28453297_1	chr7	+	1588	15	ISM	ENSMUSG00000070699.6	ENSMUST00000094632.6	1868	16	2240	-1	2240	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGGAAGTGCTGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	28443666	28453297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ENSMUSG00000070730.12_118967582_118977917_1	chr2	-	1332	9	ISM	ENSMUSG00000070730.12	ENSMUST00000094695.12	2249	13	9598	100	9598	-100	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAAGGGTCTATGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	118977917	118967581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789
ENSMUSG00000070730.12_118967627_118977954_1	chr2	-	1324	9	ISM	ENSMUSG00000070730.12	ENSMUST00000094695.12	2249	13	9561	145	9561	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCATGGACTGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	118977954	118967626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789
ENSMUSG00000070730.12_118967797_118983885_1	chr2	-	1304	10	ISM	ENSMUSG00000070730.12	ENSMUST00000094695.12	2249	13	3630	315	3630	-315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGAGCATAGGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	118983885	118967796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856
ENSMUSG00000070730.12_118967966_118984413_1	chr2	-	1293	11	ISM	ENSMUSG00000070730.12	ENSMUST00000094695.12	2249	13	3102	484	3102	-484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGCAGCTAAGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	118984413	118967965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370
ENSMUSG00000070730.12_118968117_118986866_1	chr2	-	1320	12	ISM	ENSMUSG00000070730.12	ENSMUST00000094695.12	2249	13	649	635	649	-635	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGACTCCCCCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	118986866	118968116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838
ENSMUSG00000070730.12_118968189_118986900_1	chr2	-	1282	12	ISM	ENSMUSG00000070730.12	ENSMUST00000094695.12	2249	13	615	707	615	-707	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAATAATCACACTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	118986900	118968188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838
ENSMUSG00000070730.12_118969537_118987429_1	chr2	-	1313	11	ISM	ENSMUSG00000070730.12	ENSMUST00000094695.12	2249	13	86	2055	86	-2055	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTATATATTTCTAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	118987429	118969536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987387
ENSMUSG00000070733.14_73253689_73255574_1	chr5	-	322	3	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	49905	75135	49905	-75135	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCTCTGAGAGCATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	73255574	73253688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_73253742_73254716_73254913_73255501
ENSMUSG00000070733.14_73257330_73258889_1	chr5	-	325	3	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	46590	78776	46590	-78776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCTGGAGAGCTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	73258889	73257329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_73257376_73257628_73257815_73258796
ENSMUSG00000070733.14_73258923_73265407_1	chr5	-	322	3	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	40072	80369	40072	-80369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCGTTCGTGAAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	73265407	73258922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_73259035_73262017_73262126_73265305
ENSMUSG00000070733.14_73262065_73265952_1	chr5	-	334	3	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	39527	83511	39527	-83511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCGATGGTATGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	73265952	73262064	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_73262126_73265305_73265439_73265812
ENSMUSG00000070733.14_73267567_73275883_1	chr5	-	319	4	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	29596	89013	29596	-89013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAAAGTCTACAAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	73275883	73267566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_73267616_73269705_73269815_73270091_73270196_73275826
ENSMUSG00000070733.14_73352405_73413847_1	chr5	-	322	3	ISM	ENSMUSG00000070733.14	ENSMUST00000101127.12	11340	63	115	174740	92	-173851	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACTGCTCAAGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	73413847	73352404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_73352457_73378250_73378416_73413742
ENSMUSG00000070858.13_34140878_34141241_1	chr5	+	247	2	ISM	ENSMUSG00000070858.13	ENSMUST00000114383.8	511	4	64	1112	0	-1112	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGCCCGCGGAGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	34140877	34141241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_34140984_34141100
ENSMUSG00000070880.11_70392239_70417733_1	chr2	+	1433	9	ISM	ENSMUSG00000070880.11	ENST00000625689.2	3691	18	87	14623	87	2268	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGCAATGAAAGGTAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	70392238	70417733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70392677_70394111_70394255_70397529_70397593_70403049_70403209_70404412_70404656_70409454_70409546_70416177_70416291_70417466_70417583_70417666
ENSMUSG00000070880.11_70392386_70420244_1	chr2	+	1482	11	ISM	ENSMUSG00000070880.11	ENSMUST00000094934.11	3355	17	0	12114	0	4779	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCACACACAGTGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	70392385	70420244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70392677_70394111_70394255_70397529_70397593_70403049_70403209_70404412_70404656_70409454_70409546_70416177_70416291_70417466_70417583_70417666_70417747_70417977_70418033_70420116
ENSMUSG00000070880.11_70392540_70423795_1	chr2	+	1506	14	ISM	ENSMUSG00000070880.11	ENST00000625689.2	3691	18	388	8561	0	8330	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCACAAGATGATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	70392539	70423795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70392677_70394111_70394255_70397529_70397593_70403049_70403209_70404412_70404656_70409454_70409546_70416177_70416291_70417466_70417583_70417666_70417747_70417977_70418033_70420116_70420245_70420867_70420961_70421449_70421515_70423775
ENSMUSG00000070880.11_70394200_70425026_1	chr2	+	1399	14	ISM	ENSMUSG00000070880.11	ENST00000625689.2	3691	18	2048	7330	957	-7330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGACGTCTCCTATGACA	NA	NA	NA	NA	NA	NA	NA	NA	70394199	70425026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70394255_70397529_70397593_70403049_70403209_70404412_70404656_70409454_70409546_70416177_70416291_70417466_70417583_70417666_70417747_70417977_70418033_70420116_70420245_70420867_70420961_70421449_70421515_70423775_70423855_70424967
ENSMUSG00000070880.11_70394236_70425099_1	chr2	+	1436	14	ISM	ENSMUSG00000070880.11	ENST00000625689.2	3691	18	2084	7257	993	-7257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGTGGAAAGCAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	70394235	70425099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70394255_70397529_70397593_70403049_70403209_70404412_70404656_70409454_70409546_70416177_70416291_70417466_70417583_70417666_70417747_70417977_70418033_70420116_70420245_70420867_70420961_70421449_70421515_70423775_70423855_70424967
ENSMUSG00000070880.11_70403049_70427613_1	chr2	+	1481	13	ISM	ENSMUSG00000070880.11	ENST00000625689.2	3691	18	10897	4743	9806	-4743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTGTCCCCATGGACT	NA	NA	NA	NA	NA	NA	NA	NA	70403048	70427613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70403209_70404412_70404656_70409454_70409546_70416177_70416291_70417466_70417583_70417666_70417747_70417977_70418033_70420116_70420245_70420867_70420961_70421449_70421515_70423775_70423855_70424967_70425118_70427505
ENSMUSG00000070880.11_70403168_70430012_1	chr2	+	1422	14	ISM	ENSMUSG00000070880.11	ENST00000625689.2	3691	18	11016	2344	9925	-2344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCTGAGCGACGAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	70403167	70430012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70403209_70404412_70404656_70409454_70409546_70416177_70416291_70417466_70417583_70417666_70417747_70417977_70418033_70420116_70420245_70420867_70420961_70421449_70421515_70423775_70423855_70424967_70425118_70427505_70427614_70429952
ENSMUSG00000070880.11_70404468_70430996_1	chr2	+	1386	14	ISM	ENSMUSG00000070880.11	ENST00000625689.2	3691	18	12316	1360	11225	-1360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCAGGAACAACCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	70404467	70430996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70404656_70409454_70409546_70416177_70416291_70417466_70417583_70417666_70417747_70417977_70418033_70420116_70420245_70420867_70420961_70421449_70421515_70423775_70423855_70424967_70425118_70427505_70427614_70429952_70430043_70430966
ENSMUSG00000070880.11_70404494_70431076_1	chr2	+	1440	14	ISM	ENSMUSG00000070880.11	ENST00000625689.2	3691	18	12342	1280	11251	-1280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCACCCAGTCTGACATCG	NA	NA	NA	NA	NA	NA	NA	NA	70404493	70431076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70404656_70409454_70409546_70416177_70416291_70417466_70417583_70417666_70417747_70417977_70418033_70420116_70420245_70420867_70420961_70421449_70421515_70423775_70423855_70424967_70425118_70427505_70427614_70429952_70430043_70430966
ENSMUSG00000070880.11_70404575_70431128_1	chr2	+	1411	14	ISM	ENSMUSG00000070880.11	ENST00000625689.2	3691	18	12423	1228	11332	-1228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGATCTGTAATCCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	70404574	70431128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70404656_70409454_70409546_70416177_70416291_70417466_70417583_70417666_70417747_70417977_70418033_70420116_70420245_70420867_70420961_70421449_70421515_70423775_70423855_70424967_70425118_70427505_70427614_70429952_70430043_70430966
ENSMUSG00000070880.11_70409453_70431258_1	chr2	+	1462	13	ISM	ENSMUSG00000070880.11	ENST00000625689.2	3691	18	17301	1098	16210	-1098	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAATATTTGTCACATT	NA	NA	NA	NA	NA	NA	NA	NA	70409452	70431258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70409546_70416177_70416291_70417466_70417583_70417666_70417747_70417977_70418033_70420116_70420245_70420867_70420961_70421449_70421515_70423775_70423855_70424967_70425118_70427505_70427614_70429952_70430043_70430966
ENSMUSG00000070880.11_70417472_70431380_1	chr2	+	1373	11	ISM	ENSMUSG00000070880.11	ENST00000625689.2	3691	18	25320	976	24229	-976	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGTACATGTATGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	70417471	70431380	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70417583_70417666_70417747_70417977_70418033_70420116_70420245_70420867_70420961_70421449_70421515_70423775_70423855_70424967_70425118_70427505_70427614_70429952_70430043_70430966
ENSMUSG00000070880.11_70417519_70431442_1	chr2	+	1388	11	ISM	ENSMUSG00000070880.11	ENST00000625689.2	3691	18	25367	914	24276	-914	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAATTAGCCTTACCCC	NA	NA	NA	NA	NA	NA	NA	NA	70417518	70431442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70417583_70417666_70417747_70417977_70418033_70420116_70420245_70420867_70420961_70421449_70421515_70423775_70423855_70424967_70425118_70427505_70427614_70429952_70430043_70430966
ENSMUSG00000070880.11_70417565_70431507_1	chr2	+	1407	11	ISM	ENSMUSG00000070880.11	ENST00000625689.2	3691	18	25413	849	24322	-849	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATGGTATCCCTACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	70417564	70431507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70417583_70417666_70417747_70417977_70418033_70420116_70420245_70420867_70420961_70421449_70421515_70423775_70423855_70424967_70425118_70427505_70427614_70429952_70430043_70430966
ENSMUSG00000070880.11_70420184_70431710_1	chr2	+	1390	8	ISM	ENSMUSG00000070880.11	ENST00000625689.2	3691	18	28032	646	26941	-646	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGATTAATCTGTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	70420183	70431710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70420245_70420867_70420961_70421449_70421515_70423775_70423855_70424967_70425118_70427505_70427614_70429952_70430043_70430966
ENSMUSG00000070880.11_70420194_70431810_1	chr2	+	1480	8	ISM	ENSMUSG00000070880.11	ENST00000625689.2	3691	18	28042	546	26951	-546	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTATATTCAAATATAT	NA	NA	NA	NA	NA	NA	NA	NA	70420193	70431810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70420245_70420867_70420961_70421449_70421515_70423775_70423855_70424967_70425118_70427505_70427614_70429952_70430043_70430966
ENSMUSG00000070880.11_70421449_70431959_1	chr2	+	1486	6	ISM	ENSMUSG00000070880.11	ENSMUST00000094934.11	3355	17	29063	399	28206	-397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGTGAGATTTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	70421448	70431959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70421515_70423775_70423855_70424967_70425118_70427505_70427614_70429952_70430043_70430966
ENSMUSG00000070880.11_70427504_70432201_1	chr2	+	1435	3	ISM	ENSMUSG00000070880.11	ENSMUST00000094934.11	3355	17	35118	157	34261	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGACTCGCTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	70427503	70432201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70427614_70429952_70430043_70430966
ENSMUSG00000070880.11_70429951_70432358_1	chr2	+	1484	2	ISM	ENSMUSG00000070880.11	ENSMUST00000094934.11	3355	17	37565	0	36708	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTACCCATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	70429950	70432358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_70430043_70430966
ENSMUSG00000070939.10_43088812_43092647_1	chr1	-	689	3	ISM	ENSMUSG00000070939.10	ENST00000258449.2	2690	11	22468	89	22468	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCAGGCTGCAAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	43092647	43088811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_43088996_43090717_43091146_43092570
ENSMUSG00000070939.10_43088955_43093775_1	chr1	-	726	4	ISM	ENSMUSG00000070939.10	ENST00000258449.2	2690	11	21340	232	21340	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCCAGCTCTGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	43093775	43088954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_43088996_43090717_43091146_43092570_43092731_43093678
ENSMUSG00000070939.10_43090874_43095882_1	chr1	-	690	4	ISM	ENSMUSG00000070939.10	ENST00000258449.2	2690	11	19233	2151	19233	-2151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGGTCCTACAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	43095882	43090873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_43091146_43092570_43092731_43093678_43093826_43095771
ENSMUSG00000070939.10_43091086_43099175_1	chr1	-	705	6	ISM	ENSMUSG00000070939.10	ENST00000258449.2	2690	11	15940	2363	15940	-2363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGCCCTGCACATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	43099175	43091085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_43091146_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039
ENSMUSG00000070939.10_43093748_43101759_1	chr1	-	705	5	ISM	ENSMUSG00000070939.10	ENST00000258449.2	2690	11	13356	5025	13356	-5025	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCTTAAGAAATACCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	43101759	43093747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676
ENSMUSG00000070939.10_43095807_43106760_1	chr1	-	719	5	ISM	ENSMUSG00000070939.10	ENST00000258449.2	2690	11	8355	7084	8355	-7084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGCTGACTGGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	43106760	43095806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633
ENSMUSG00000070939.10_43099051_43110815_1	chr1	-	764	4	ISM	ENSMUSG00000070939.10	ENST00000258449.2	2690	11	4300	10328	4300	-10328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCACAAAAAGTGAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	43110815	43099050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_43099382_43101676_43101760_43106633_43106789_43110620
ENSMUSG00000070939.10_43099276_43114568_1	chr1	-	697	5	ISM	ENSMUSG00000070939.10	ENST00000258449.2	2690	11	547	10553	547	-10553	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACCAGCTGACCCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	43114568	43099275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410
ENSMUSG00000070939.10_43099337_43114621_1	chr1	-	689	5	ISM	ENSMUSG00000070939.10	ENST00000258449.2	2690	11	494	10614	494	-10614	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCCCACCTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	43114621	43099336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410
ENSMUSG00000070939.10_43110656_43114928_1	chr1	-	678	2	ISM	ENSMUSG00000070939.10	ENST00000258449.2	2690	11	187	21933	187	-21933	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGGAGGGGCACATCC	NA	NA	NA	NA	NA	NA	NA	NA	43114928	43110655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_43110816_43114410
ENSMUSG00000070939.10_43110656_43114987_1	chr1	-	737	2	ISM	ENSMUSG00000070939.10	ENST00000258449.2	2690	11	128	21933	128	-21933	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGGAGGGGCACATCC	NA	NA	NA	NA	NA	NA	NA	NA	43114987	43110655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_43110816_43114410
ENSMUSG00000070953.14_34669036_34670659_1	chr2	-	557	2	ISM	ENSMUSG00000070953.14	ENST00000628863.2	1198	7	16789	-188	16789	188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCTGTCTTGAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	34670659	34669035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34669542_34670608
ENSMUSG00000070953.14_34669097_34670728_1	chr2	-	565	2	ISM	ENSMUSG00000070953.14	ENST00000628863.2	1198	7	16720	-127	16720	127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGCAGAGGCCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	34670728	34669096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34669542_34670608
ENSMUSG00000070953.14_34669229_34685342_1	chr2	-	1125	6	NNC	ENSMUSG00000070953.14	novel	1198	7	NA	NA	2106	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	957	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	34685342	34669228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675779_34680514_34680668_34685183
ENSMUSG00000070953.14_34669229_34687429_1	chr2	-	1174	7	FSM	ENSMUSG00000070953.14	ENST00000628863.2	1198	7	19	5	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	34687429	34669228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675786_34680514_34680668_34685183_34685342_34687386
ENSMUSG00000070953.14_34669229_34687429_2	chr2	-	1168	7	NNC	ENSMUSG00000070953.14	novel	1198	7	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1048	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	34687429	34669228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675786_34680520_34680668_34685183_34685342_34687386
ENSMUSG00000070953.14_34669229_34687429_3	chr2	-	1169	7	NNC	ENSMUSG00000070953.14	novel	1198	7	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1007	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	34687429	34669228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_34669537_34670608_34670759_34674557_34674708_34675578_34675786_34680514_34680668_34685183_34685342_34687386
ENSMUSG00000070953.14_34669249_34685317_1	chr2	-	1042	6	ISM	ENSMUSG00000070953.14	ENSMUST00000118108.2	1431	8	4423	0	2131	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCCCACATTTGTATTA	NA	NA	NA	NA	NA	NA	NA	NA	34685317	34669248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183
ENSMUSG00000070953.14_34675661_34689880_1	chr2	-	568	5	ISM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	44	8093	44	-6412	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACCAACTATACGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34689880	34675660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
ENSMUSG00000070972.14_59003210_59024482_1	chr4	+	2894	4	FSM	ENSMUSG00000070972.14	ENSMUST00000095070.4	4023	4	38	1091	38	-1091	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACTGTAGTTGGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	59003209	59024482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_59003558_59017669_59017823_59020058_59020530_59022560
ENSMUSG00000070972.14_59003429_59024667_1	chr4	+	2860	4	FSM	ENSMUSG00000070972.14	ENSMUST00000095070.4	4023	4	257	906	257	-906	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAGAACAAATTTATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	59003428	59024667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_59003558_59017669_59017823_59020058_59020530_59022560
ENSMUSG00000070972.14_59003477_59024733_1	chr4	+	2878	4	FSM	ENSMUSG00000070972.14	ENSMUST00000095070.4	4023	4	305	840	305	-840	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACATCTCTGATTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	59003476	59024733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_59003558_59017669_59017823_59020058_59020530_59022560
ENSMUSG00000070972.14_59017725_59024880_1	chr4	+	2889	3	ISM	ENSMUSG00000070972.14	ENSMUST00000095070.4	4023	4	14553	693	14553	-693	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCATACCCACAAGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	59017724	59024880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59017823_59020058_59020530_59022560
ENSMUSG00000070972.14_59017787_59024927_1	chr4	+	2874	3	ISM	ENSMUSG00000070972.14	ENSMUST00000095070.4	4023	4	14615	646	14615	-646	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTTGTTCAGCATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	59017786	59024927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59017823_59020058_59020530_59022560
ENSMUSG00000070972.14_59020159_59025111_1	chr4	+	2922	2	ISM	ENSMUSG00000070972.14	ENSMUST00000095070.4	4023	4	16987	462	16987	-462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGATGTTCAGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	59020158	59025111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59020530_59022560
ENSMUSG00000070972.14_59020238_59025143_1	chr4	+	2875	2	ISM	ENSMUSG00000070972.14	ENSMUST00000095070.4	4023	4	17066	430	17066	-430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTGGATATTCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	59020237	59025143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59020530_59022560
ENSMUSG00000070972.14_59020325_59025210_1	chr4	+	2855	2	ISM	ENSMUSG00000070972.14	ENSMUST00000095070.4	4023	4	17153	363	17153	-363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCTTATGTGAGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	59020324	59025210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_59020530_59022560
ENSMUSG00000071014.11_40270591_40279409_1	chr4	-	638	4	NNC	ENSMUSG00000071014.11	novel	659	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTAGCTACTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	40279409	40270590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_40270848_40272809_40272855_40277652_40277737_40279157
ENSMUSG00000071015.3_34743784_34752381_1	chr4	-	798	3	FSM	ENSMUSG00000071015.3	ENST00000608326.1	809	3	19	-8	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGTGGTCAGAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	34752381	34743783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_34744289_34746455_34746652_34752284
ENSMUSG00000071019.12_4056774_4076931_1	chr4	-	981	6	NNC	ENSMUSG00000071019.12	novel	924	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATTGACCATGATAATCA	NA	NA	NA	NA	NA	NA	NA	NA	4076931	4056773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_4056905_4058760_4058887_4062618_4062764_4063225_4063321_4069885_4070011_4076572
ENSMUSG00000071019.12_4056774_4076931_2	chr4	-	986	6	FSM	ENSMUSG00000071019.12	ENST00000524136.6	924	6	-62	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATTGACCATGATAATCA	NA	NA	NA	NA	NA	NA	NA	NA	4076931	4056773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_4056905_4058760_4058887_4062618_4062764_4063220_4063321_4069885_4070011_4076572
ENSMUSG00000071019.12_4056774_4076931_3	chr4	-	989	6	FSM	ENSMUSG00000071019.12	ENSMUST00000095151.12	1834	6	0	845	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATTGACCATGATAATCA	NA	NA	NA	NA	NA	NA	NA	NA	4076931	4056773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_4056905_4058760_4058887_4062618_4062764_4063220_4063321_4069885_4070018_4076576
ENSMUSG00000071047.6_93746842_93766138_1	chr8	-	1422	11	ISM	ENSMUSG00000071047.6	ENSMUST00000095211.5	1980	14	8682	0	8682	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCGTCTGCGTTTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	93766138	93746841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_93747224_93747515_93747589_93748968_93749101_93751823_93751972_93752194_93752276_93753921_93754063_93757692_93757732_93759234_93759340_93760555_93760661_93762579_93762734_93766076
ENSMUSG00000071047.6_93747165_93771685_1	chr8	-	1463	13	ISM	ENSMUSG00000071047.6	ENSMUST00000095211.5	1980	14	3135	323	3135	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGATCGGAGCCACCACC	NA	NA	NA	NA	NA	NA	NA	NA	93771685	93747164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_93747224_93747515_93747589_93748968_93749101_93751823_93751972_93752194_93752276_93753921_93754063_93757692_93757732_93759234_93759340_93760555_93760661_93762579_93762734_93766076_93766211_93768590_93768736_93771538
ENSMUSG00000071064.16_79755216_79917150_2	chr8	+	3166	14	NNC	ENSMUSG00000071064.16	novel	3150	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGGAACAGACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79755215	79917150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_79755359_79796999_79797173_79802686_79803168_79818461_79818696_79844803_79845044_79847113_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912983_79914777_79914811_79916295
ENSMUSG00000071064.16_79755216_79917150_3	chr8	+	3167	14	NNC	ENSMUSG00000071064.16	novel	3150	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGGAACAGACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79755215	79917150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_79755359_79796999_79797173_79802686_79803168_79818462_79818696_79844803_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912983_79914777_79914811_79916295
ENSMUSG00000071064.16_79755216_79917150_4	chr8	+	3164	13	NNC	ENSMUSG00000071064.16	novel	4511	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGGAACAGACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79755215	79917150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_79755359_79796999_79797173_79802686_79803168_79818461_79818696_79844803_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912983_79916266
ENSMUSG00000071064.16_79755216_79917150_5	chr8	+	3168	14	FSM	ENSMUSG00000071064.16	ENST00000513320.5	3150	14	-18	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGGAACAGACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79755215	79917150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_79755359_79796999_79797173_79802686_79803168_79818461_79818696_79844803_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912983_79914777_79914811_79916295
ENSMUSG00000071064.16_79787329_79797119_1	chr8	+	711	2	ISM	ENSMUSG00000071064.16	ENSMUST00000087927.11	2801	3	32263	1347	32028	-1347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCCATTCCGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	79787328	79797119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79787920_79796999
ENSMUSG00000071064.16_79787423_79818583_1	chr8	+	1273	4	ISM	ENSMUSG00000071064.16	ENST00000652097.1	4086	15	32122	98534	32122	5441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCCCAAGCGTCTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	79787422	79818583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79787920_79796999_79797173_79802686_79803168_79818461
ENSMUSG00000071064.16_79787496_79818626_1	chr8	+	1243	4	ISM	ENSMUSG00000071064.16	ENST00000652097.1	4086	15	32195	98491	32195	5484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGGGAGTGTGTTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	79787495	79818626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79787920_79796999_79797173_79802686_79803168_79818461
ENSMUSG00000071064.16_79787515_79802782_1	chr8	+	674	3	ISM	ENSMUSG00000071064.16	ENST00000513840.2	2285	5	32233	10360	32214	4316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGCACTTCCTGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	79787514	79802782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79787920_79796999_79797173_79802686
ENSMUSG00000071064.16_79787641_79844881_1	chr8	+	1245	5	ISM	ENSMUSG00000071064.16	ENST00000652097.1	4086	15	32340	72236	32340	31739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATATCACCCAGCCGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	79787640	79844881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79787920_79796999_79797173_79802686_79803168_79818461_79818696_79844803
ENSMUSG00000071064.16_79787701_79844935_1	chr8	+	1239	5	ISM	ENSMUSG00000071064.16	ENST00000652097.1	4086	15	32400	72182	32400	31793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACCCTTACAGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79787700	79844935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79787920_79796999_79797173_79802686_79803168_79818461_79818696_79844803
ENSMUSG00000071064.16_79787753_79844990_1	chr8	+	1242	5	ISM	ENSMUSG00000071064.16	ENST00000652097.1	4086	15	32452	72127	32452	31848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCAGGACATCTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	79787752	79844990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79787920_79796999_79797173_79802686_79803168_79818461_79818696_79844803
ENSMUSG00000071064.16_79797046_79812698_1	chr8	+	677	3	ISM	ENSMUSG00000071064.16	ENST00000513840.2	2285	5	41764	444	41745	-444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTCACTCCTTAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	79797045	79812698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79797173_79802686_79803168_79812629
ENSMUSG00000071064.16_79797086_79812776_1	chr8	+	715	3	ISM	ENSMUSG00000071064.16	ENST00000513840.2	2285	5	41804	366	41785	-366	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGCCCCTTGGTAACTA	NA	NA	NA	NA	NA	NA	NA	NA	79797085	79812776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79797173_79802686_79803168_79812629
ENSMUSG00000071064.16_79797157_79812828_1	chr8	+	696	3	ISM	ENSMUSG00000071064.16	ENST00000513840.2	2285	5	41875	314	41856	-314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATCTCAGGCTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	79797156	79812828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79797173_79802686_79803168_79812629
ENSMUSG00000071064.16_79844956_79916390_1	chr8	+	1205	9	ISM	ENSMUSG00000071064.16	ENST00000656985.1	4085	14	89655	741	89655	-727	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGTGAAGGCCAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	79844955	79916390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912996_79916295
ENSMUSG00000071064.16_79902439_79916728_1	chr8	+	1316	6	ISM	ENSMUSG00000071064.16	ENST00000656985.1	4085	14	147138	403	147138	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGAGTCCAGCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	79902438	79916728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912996_79916295
ENSMUSG00000071064.16_79902559_79916758_1	chr8	+	1226	6	ISM	ENSMUSG00000071064.16	ENST00000656985.1	4085	14	147258	373	147258	-359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGGAGCCCCGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	79902558	79916758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912996_79916295
ENSMUSG00000071064.16_79905604_79916881_1	chr8	+	1241	5	ISM	ENSMUSG00000071064.16	ENST00000656985.1	4085	14	150303	250	150303	-236	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCCAACCTGGCACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	79905603	79916881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79905709_79906673_79906841_79912226_79912419_79912804_79912996_79916295
ENSMUSG00000071064.16_79905604_79916924_1	chr8	+	1284	5	ISM	ENSMUSG00000071064.16	ENST00000656985.1	4085	14	150303	207	150303	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGCATCTTGACAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	79905603	79916924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79905709_79906673_79906841_79912226_79912419_79912804_79912996_79916295
ENSMUSG00000071064.16_79906706_79917031_1	chr8	+	1254	4	ISM	ENSMUSG00000071064.16	ENST00000656985.1	4085	14	151405	100	151405	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTGCGCCTCCCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	79906705	79917031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79906841_79912226_79912419_79912804_79912996_79916295
ENSMUSG00000071064.16_79906741_79917107_1	chr8	+	1295	4	ISM	ENSMUSG00000071064.16	ENST00000656985.1	4085	14	151440	24	151440	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGAGGACAGCCGCGT	NA	NA	NA	NA	NA	NA	NA	NA	79906740	79917107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79906841_79912226_79912419_79912804_79912996_79916295
ENSMUSG00000071064.16_79912351_79916390_1	chr8	+	369	4	ISM	ENSMUSG00000071064.16	ENST00000652097.1	4086	15	157050	727	157050	-727	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGTGAAGGCCAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	79912350	79916390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79912419_79912804_79912983_79914782_79914811_79916295
ENSMUSG00000071064.16_79912944_79916588_1	chr8	+	360	3	ISM	ENSMUSG00000071064.16	ENST00000652097.1	4086	15	157643	529	157643	-529	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGCACAAGAAGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	79912943	79916588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_79912983_79914782_79914811_79916295
ENSMUSG00000071072.13_127894880_127912848_2	chr10	+	1535	6	NIC	ENSMUSG00000071072.13	novel	1559	7	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGAAGATTTCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	127894879	127912848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127910090_127910154_127911935
ENSMUSG00000071072.13_127895009_127912145_1	chr10	+	704	6	NNC	ENSMUSG00000071072.13	novel	953	7	NA	NA	10	-146	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATTATGTACCATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	127895008	127912145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_127895156_127904540_127904655_127905084_127905155_127907936_127908027_127910090_127910164_127911935
ENSMUSG00000071072.13_127895047_127912188_1	chr10	+	724	7	FSM	ENSMUSG00000071072.13	ENST00000436399.6	953	7	48	181	48	-103	multi-exon	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTATCCTTATGCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	127895046	127912188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ENSMUSG00000071072.13_127895082_127912257_1	chr10	+	758	7	FSM	ENSMUSG00000071072.13	ENST00000436399.6	953	7	83	112	83	-34	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTCGGACAAATAATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	127895081	127912257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ENSMUSG00000071072.13_127895129_127912352_1	chr10	+	806	7	FSM	ENSMUSG00000071072.13	ENST00000436399.6	953	7	130	17	130	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGATCCTAGACCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	127895128	127912352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ENSMUSG00000071072.13_127904541_127912369_1	chr10	+	796	6	ISM	ENSMUSG00000071072.13	ENST00000436399.6	953	7	9542	0	9542	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTTAAAGGAGGCGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	127904540	127912369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127904655_127905084_127905155_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ENSMUSG00000071072.13_127904588_127912144_1	chr10	+	623	7	ISM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	9765	997	9589	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGATTATGTACCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	127904587	127912144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ENSMUSG00000071072.13_127904636_127912210_1	chr10	+	641	7	ISM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	9813	931	9637	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCATGATTCCATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	127904635	127912210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ENSMUSG00000071072.13_127905141_127912254_1	chr10	+	610	6	ISM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	10318	887	10142	-37	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGCTCGGACAAATAATT	NA	NA	NA	NA	NA	NA	NA	NA	127905140	127912254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ENSMUSG00000071072.13_127906003_127912369_1	chr10	+	711	5	ISM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	11180	772	11004	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTTAAAGGAGGCGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	127906002	127912369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ENSMUSG00000071072.13_127906035_127912045_1	chr10	+	292	4	ISM	ENSMUSG00000071072.13	ENST00000448157.6	1027	7	11152	246	11036	-246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGATATGCTGTACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	127906034	127912045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_127906102_127907936_127908027_127911206_127911232_127911935
ENSMUSG00000071074.10_46559217_46562414_1	chr17	+	853	8	ISM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	211	1049	211	-1049	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGCGGGCTGCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	46559216	46562414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289
ENSMUSG00000071074.10_46559825_46562515_1	chr17	+	780	8	ISM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	819	948	819	-948	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACATCCCACCCATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	46559824	46562515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491
ENSMUSG00000071074.10_46559955_46562560_1	chr17	+	695	8	ISM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	949	903	949	-903	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCCTGCTGCCAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	46559954	46562560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491
ENSMUSG00000071074.10_46559955_46562612_1	chr17	+	747	8	ISM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	949	851	949	-851	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCAGTGACTCTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	46559954	46562612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491
ENSMUSG00000071074.10_46561334_46562830_1	chr17	+	851	6	ISM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	2328	633	2328	-633	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGCCAAGTGCAGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	46561333	46562830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491
ENSMUSG00000071074.10_46561720_46562943_1	chr17	+	822	4	ISM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	2714	520	2714	-520	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTAGCTCCTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	46561719	46562943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46561852_46562039_46562154_46562289_46562414_46562491
ENSMUSG00000071074.10_46562267_46563110_1	chr17	+	766	2	ISM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	3261	353	3261	-353	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACCCCTGTGCTATCAT	NA	NA	NA	NA	NA	NA	NA	NA	46562266	46563110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46562414_46562491
ENSMUSG00000071074.10_46562267_46563166_1	chr17	+	822	2	ISM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	3261	297	3261	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGTCTAAGTGTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	46562266	46563166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46562414_46562491
ENSMUSG00000071074.10_46562386_46563219_1	chr17	+	756	2	ISM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	3380	244	3380	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCCAAGTGTACATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	46562385	46563219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_46562414_46562491
ENSMUSG00000071078.7_70584170_70586389_1	chr8	+	988	5	FSM	ENSMUSG00000071078.7	ENSMUST00000095273.7	1161	5	173	0	173	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAAACACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	70584169	70586389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_70584250_70584567_70584659_70585061_70585168_70585236_70585305_70585746
ENSMUSG00000071172.14_29251663_29260402_1	chr17	+	612	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	61	1945	61	-1945	multi-exon	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTGTACAGGAAATAACT	NA	NA	NA	NA	NA	NA	NA	NA	29251662	29260402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ENSMUSG00000071172.14_29257510_29260705_1	chr17	+	563	4	ISM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	5908	1642	5908	-1642	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACTAATGATATAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	29257509	29260705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_29257599_29259748_29259788_29260180_29260268_29260357
ENSMUSG00000071180.6_108181023_108185036_1	chr13	+	1427	3	FSM	ENSMUSG00000071180.6	ENSMUST00000225972.2	2097	3	0	670	0	263	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAACACAGCTAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	108181022	108185036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_108181243_108182958_108183103_108183973
ENSMUSG00000071252.7_77323044_77393379_1	chr13	+	959	4	ISM	ENSMUSG00000071252.7	ENSMUST00000168779.3	5051	20	39385	368524	56	51546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATCACAGCTAACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	77323043	77393379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_77323104_77331719_77331889_77340672_77341343_77393319
ENSMUSG00000071252.7_77340766_77408069_1	chr13	+	944	4	ISM	ENSMUSG00000071252.7	ENSMUST00000168779.3	5051	20	57107	353834	17778	66236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACAAACTGAAAGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	77340765	77408069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_77341343_77393319_77393482_77402241_77402337_77407959
ENSMUSG00000071252.7_77341257_77411770_1	chr13	+	957	6	ISM	ENSMUSG00000071252.7	ENSMUST00000168779.3	5051	20	57598	350133	18269	-68807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGGGATGACTACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	77341256	77411770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_77341343_77393319_77393482_77402241_77402337_77407959_77408188_77410007_77410274_77411650
ENSMUSG00000071252.7_77393375_77415896_1	chr13	+	963	6	ISM	ENSMUSG00000071252.7	ENSMUST00000168779.3	5051	20	109716	346007	70387	-64681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAAATCCTTGGGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	77393374	77415896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_77393482_77402241_77402337_77407959_77408188_77410007_77410274_77411650_77411802_77415780
ENSMUSG00000071252.7_77407992_77418021_1	chr13	+	945	5	ISM	ENSMUSG00000071252.7	ENSMUST00000168779.3	5051	20	124333	343882	85004	-62556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTAGCAATTTTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	77407991	77418021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_77408188_77410007_77410274_77411650_77411802_77415780_77415972_77417880
ENSMUSG00000071252.7_77410211_77451528_1	chr13	+	953	7	ISM	ENSMUSG00000071252.7	ENST00000513200.7	3595	17	87223	29049	87223	-29049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTCACATGGAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	77410210	77451528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_77410274_77411650_77411802_77415780_77415972_77417880_77418064_77429160_77429272_77446585_77446726_77451414
ENSMUSG00000071252.7_77411701_77464538_1	chr13	+	963	7	ISM	ENSMUSG00000071252.7	ENST00000513200.7	3595	17	88713	16039	88713	-16039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTGTGCAACAGATAATA	NA	NA	NA	NA	NA	NA	NA	NA	77411700	77464538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_77411802_77415780_77415972_77417880_77418064_77429160_77429272_77446585_77446726_77451414_77451580_77464466
ENSMUSG00000071252.7_77417962_77471715_1	chr13	+	975	6	ISM	ENSMUSG00000071252.7	ENST00000513200.7	3595	17	94974	8862	94974	-8862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAGATGGAGTAAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	77417961	77471715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_77418064_77429160_77429272_77446585_77446726_77451414_77451580_77464466_77464692_77471483
ENSMUSG00000071252.7_77446647_77476055_1	chr13	+	945	5	ISM	ENSMUSG00000071252.7	ENST00000513200.7	3595	17	123659	4522	123659	-4522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGCGATGGTCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	77446646	77476055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_77446726_77451414_77451580_77464466_77464692_77471483_77471890_77475985
ENSMUSG00000071252.7_77451499_77480513_1	chr13	+	961	5	ISM	ENSMUSG00000071252.7	ENST00000513200.7	3595	17	128511	64	128511	-64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTCCTGCTTTTAACC	NA	NA	NA	NA	NA	NA	NA	NA	77451498	77480513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_77451580_77464466_77464692_77471483_77471890_77475985_77476143_77480421
ENSMUSG00000071253.9_62756412_62781901_1	chr10	+	1154	8	NNC	ENSMUSG00000071253.9	novel	3145	9	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1680	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTAAAATTAAGCTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	62756411	62781901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_62756661_62764074_62764168_62766081_62766216_62768497_62768562_62773196_62773319_62773706_62773774_62776820_62776984_62781639
ENSMUSG00000071253.9_62756412_62781901_2	chr10	+	1160	8	NNC	ENSMUSG00000071253.9	novel	3145	9	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1680	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTAAAATTAAGCTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	62756411	62781901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_62756661_62764074_62764168_62766081_62766216_62768497_62768562_62773196_62773319_62773706_62773774_62776820_62777002_62781651
ENSMUSG00000071253.9_62756412_62781901_4	chr10	+	1142	8	NIC	ENSMUSG00000071253.9	novel	3145	9	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1681	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTAAAATTAAGCTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	62756411	62781901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_62756661_62764074_62764168_62766081_62766216_62768497_62768562_62773196_62773319_62773706_62773774_62776820_62776984_62781651
ENSMUSG00000071256.5_23778383_23780197_1	chr17	-	407	4	ISM	ENSMUSG00000071256.5	ENSMUST00000095606.5	2686	6	3015	2642	3015	-2642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACTCGAGGGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	23780197	23778382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23778523_23778607_23778679_23778958_23779077_23780119
ENSMUSG00000071256.5_23779010_23780453_1	chr17	-	401	2	ISM	ENSMUSG00000071256.5	ENSMUST00000095606.5	2686	6	2759	3269	2759	-3269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGGGGTCCAGAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	23780453	23779009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_23779077_23780119
ENSMUSG00000071317.5_45215486_45223937_1	chr10	+	437	4	ISM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	3618	24638	3618	-24638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCTCCCGAATTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	45215485	45223937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45215553_45219129_45219255_45222222_45222411_45223880
ENSMUSG00000071317.5_45219128_45229885_1	chr10	+	464	4	ISM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	7260	18690	7260	-18690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTCAAGAGAAAGACTGACT	NA	NA	NA	NA	NA	NA	NA	NA	45219127	45229885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45219255_45222222_45222411_45223880_45223990_45229845
ENSMUSG00000071317.5_45219182_45229932_1	chr10	+	457	4	ISM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	7314	18643	7314	-18643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAATTTTTAGGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	45219181	45229932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45219255_45222222_45222411_45223880_45223990_45229845
ENSMUSG00000071317.5_45222293_45230937_1	chr10	+	486	4	ISM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	10425	17638	10425	-17638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGGCCTGCACCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	45222292	45230937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45222411_45223880_45223990_45229845_45230014_45230846
ENSMUSG00000071317.5_45222355_45230988_1	chr10	+	475	4	ISM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	10487	17587	10487	-17587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTCCCACAGTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	45222354	45230988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45222411_45223880_45223990_45229845_45230014_45230846
ENSMUSG00000071317.5_45223924_45245349_1	chr10	+	439	4	ISM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	12056	3226	12056	-3226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACGATGAGGTCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	45223923	45245349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45223990_45229845_45230014_45230846_45230989_45245286
ENSMUSG00000071317.5_45229883_45245453_1	chr10	+	440	3	ISM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	18015	3122	18015	-3122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCCACACTCTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	45229882	45245453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45230014_45230846_45230989_45245286
ENSMUSG00000071317.5_45229940_45245497_1	chr10	+	427	3	ISM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	18072	3078	18072	-3078	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCAGAAGGGAAGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	45229939	45245497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45230014_45230846_45230989_45245286
ENSMUSG00000071317.5_45230887_45245620_1	chr10	+	436	2	ISM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	19019	2955	19019	-2955	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATATTATTTTAGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	45230886	45245620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45230989_45245286
ENSMUSG00000071317.5_45230930_45245678_1	chr10	+	451	2	ISM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	19062	2897	19062	-2897	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAGTTGTGGCCCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	45230929	45245678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_45230989_45245286
ENSMUSG00000071347.4_61009774_61017376_1	chr14	+	363	4	FSM	ENSMUSG00000071347.4	ENST00000382145.5	489	4	35	91	35	-91	multi-exon	FALSE	canonical	NA	NA	NA	NA	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGGTGACAGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	61009773	61017376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_61009912_61014473_61014537_61016700_61016737_61017250
ENSMUSG00000071347.4_61009774_61017376_4	chr14	+	354	4	NNC	ENSMUSG00000071347.4	novel	489	4	NA	NA	35	-91	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGGTGACAGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	61009773	61017376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_61009912_61014482_61014537_61016700_61016737_61017250
ENSMUSG00000071347.4_61009879_61017467_1	chr14	+	349	4	FSM	ENSMUSG00000071347.4	ENST00000382145.5	489	4	140	0	140	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGACACAAGGACTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	61009878	61017467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_61009912_61014473_61014537_61016700_61016737_61017250
ENSMUSG00000071359.14_22581146_22585094_1	chr10	-	898	4	ISM	ENSMUSG00000071359.14	ENSMUST00000095794.4	1195	7	22743	-134	22252	134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGTATATATTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	22585094	22581145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044
ENSMUSG00000071359.14_22581562_22607136_1	chr10	-	879	7	FSM	ENSMUSG00000071359.14	ENSMUST00000127698.8	2873	7	210	1784	210	-282	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTTGCTGTAATATAAA	NA	NA	NA	NA	NA	NA	NA	NA	22607136	22581561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
ENSMUSG00000071379.3_17837541_17841297_1	chr12	+	301	2	ISM	ENSMUSG00000071379.3	ENSMUST00000071858.5	1526	4	96684	637	96684	-637	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCTCCCAGGACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	17837540	17841297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_17837652_17841107
ENSMUSG00000071415.7_97669145_97672290_1	chr11	-	191	2	ISM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	973	792	973	-792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1030	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTTTGAAGATAACGCA	NA	NA	NA	NA	NA	NA	NA	NA	97672290	97669144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97669205_97672159
ENSMUSG00000071415.7_97669168_97672658_1	chr11	-	193	3	ISM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	605	815	605	-815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	951	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAAGAAAAGATGGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	97672658	97669167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97669205_97672159_97672289_97672631
ENSMUSG00000071415.7_97672230_97673208_1	chr11	-	182	3	ISM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	55	3877	55	-3877	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	831	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTGGTGTTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	97673208	97672229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_97672289_97672631_97672716_97673169
ENSMUSG00000071451.11_34346947_34362156_1	chr13	+	675	3	FSM	ENSMUSG00000071451.11	ENST00000419065.6	547	3	-80	-48	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATTTTACTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34346946	34362156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_34347233_34350043_34350199_34361922
ENSMUSG00000071533.12_55835869_55844609_1	chr16	-	1966	4	ISM	ENSMUSG00000071533.12	ENSMUST00000096021.10	608	5	422	-1685	382	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55844609	55835868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586
ENSMUSG00000071533.12_55835869_55844671_1	chr16	-	2028	4	ISM	ENSMUSG00000071533.12	ENSMUST00000096021.10	608	5	360	-1685	320	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55844671	55835868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586
ENSMUSG00000071533.12_55835869_55844677_1	chr16	-	2034	4	ISM	ENSMUSG00000071533.12	ENSMUST00000096021.10	608	5	354	-1685	314	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55844677	55835868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586
ENSMUSG00000071533.12_55836048_55850039_1	chr16	-	2053	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	63	179	3	-179	multi-exon	FALSE	canonical	NA	NA	NA	NA	1964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAACATTTATGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	55850039	55836047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
ENSMUSG00000071533.12_55836090_55850069_1	chr16	-	2041	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	33	221	-10	-221	multi-exon	FALSE	canonical	NA	NA	NA	NA	1713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTATTAGTTCATACATG	NA	NA	NA	NA	NA	NA	NA	NA	55850069	55836089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
ENSMUSG00000071533.12_55836160_55850102_1	chr16	-	2004	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	0	291	0	-291	multi-exon	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAACACTTGGTTCACTA	NA	NA	NA	NA	NA	NA	NA	NA	55850102	55836159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
ENSMUSG00000071547.5_30853010_30860793_1	chr14	+	1485	13	FSM	ENSMUSG00000071547.5	ENST00000459839.5	1614	13	-77	206	0	-206	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCCTACCTACTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	30853009	30860793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_30853334_30856695_30856881_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ENSMUSG00000071547.5_30853010_30861081_1	chr14	+	1843	14	NNC	ENSMUSG00000071547.5	novel	1848	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGCTTCATTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	30853009	30861081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858026_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ENSMUSG00000071547.5_30856695_30861068_1	chr14	+	1437	12	ISM	ENSMUSG00000071547.5	ENST00000459839.5	1614	13	3608	-69	-115	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTCTCAGAGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	30856694	30861068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_30856881_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ENSMUSG00000071632.11_18655599_18658220_1	chr16	+	406	2	ISM	ENSMUSG00000071632.11	ENSMUST00000055413.13	1281	3	271	690	268	-575	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTTGTGAAAATCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	18655598	18658220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18655624_18657839
ENSMUSG00000071644.11_8944405_8954700_1	chr19	+	1049	8	ISM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	0	1143	0	-761	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1663	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGCGTAAGTACTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	8944404	8954700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681
ENSMUSG00000071644.11_8944523_8954741_1	chr19	+	972	8	ISM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	118	1102	118	-720	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1869	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCATATTTTTGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	8944522	8954741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681
ENSMUSG00000071644.11_8944574_8954792_1	chr19	+	972	8	ISM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	169	1051	169	-669	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2000	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGAGTACCGCTTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	8944573	8954792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681
ENSMUSG00000071644.11_8945680_8955010_1	chr19	+	980	8	ISM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	1275	833	1275	-451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAACAACAGCAGCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	8945679	8955010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948
ENSMUSG00000071644.11_8946562_8955342_1	chr19	+	983	8	ISM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	2157	501	2157	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGGCGGAAACTGGATC	NA	NA	NA	NA	NA	NA	NA	NA	8946561	8955342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ENSMUSG00000071644.11_8946791_8955462_1	chr19	+	1012	7	ISM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	2386	381	2386	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2779	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAACAAGTCTTGCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	8946790	8955462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ENSMUSG00000071644.11_8947203_8955609_1	chr19	+	1084	6	ISM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	2798	234	-2722	148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3590	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTTGTGGCAGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	8947202	8955609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ENSMUSG00000071644.11_8950267_8955843_1	chr19	+	1040	4	ISM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	5862	0	342	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTTTTCTGTCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	8950266	8955843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8950473_8954681_8954855_8954948_8955074_8955307
ENSMUSG00000071644.11_8950383_8955462_1	chr19	+	530	4	ISM	ENSMUSG00000071644.11	ENST00000422983.1	720	5	458	-1	458	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAACAAGTCTTGCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	8950382	8955462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8950473_8954681_8954855_8954948_8955061_8955307
ENSMUSG00000071644.11_8950383_8955843_1	chr19	+	924	4	ISM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	5978	0	458	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1741	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTTTTCTGTCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	8950382	8955843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8950473_8954681_8954855_8954948_8955074_8955307
ENSMUSG00000071645.7_8931294_8943438_1	chr19	+	2534	9	FSM	ENSMUSG00000071645.7	ENSMUST00000096239.7	2753	9	83	136	83	-136	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGACTCCCAAGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	8931293	8943438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
ENSMUSG00000071645.7_8932751_8943574_1	chr19	+	2578	8	ISM	ENSMUSG00000071645.7	ENSMUST00000096239.7	2753	9	1540	0	1540	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTTCTTTTGCATAC	NA	NA	NA	NA	NA	NA	NA	NA	8932750	8943574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8932942_8936450_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
ENSMUSG00000071646.10_8919239_8924500_1	chr19	+	1173	8	ISM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	0	5167	0	-5167	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGCCAGCTGATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	8919238	8924500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400
ENSMUSG00000071646.10_8919487_8924774_1	chr19	+	1084	9	ISM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	248	4893	248	-4893	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGATTTCAATGATATCCG	NA	NA	NA	NA	NA	NA	NA	NA	8919486	8924774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615
ENSMUSG00000071646.10_8919726_8925439_1	chr19	+	1060	12	ISM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	487	4228	487	-4228	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGGCTGGATTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	8919725	8925439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388
ENSMUSG00000071646.10_8923194_8926377_1	chr19	+	1053	11	ISM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	3955	3290	3955	-3290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTAACCGGGCCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	8923193	8926377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314
ENSMUSG00000071646.10_8923629_8926543_1	chr19	+	1113	9	ISM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	4390	3124	4390	-3124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGACTGGAGTACTAGC	NA	NA	NA	NA	NA	NA	NA	NA	8923628	8926543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314
ENSMUSG00000071646.10_8924074_8928302_1	chr19	+	1048	10	ISM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	4835	1365	4835	-1365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTCGGGGTACCAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	8924073	8928302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275
ENSMUSG00000071646.10_8924615_8928648_1	chr19	+	1149	9	ISM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	5376	1019	5376	-1019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGAGGGAGTCCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	8924614	8928648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499
ENSMUSG00000071646.10_8924759_8928899_1	chr19	+	1051	10	ISM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	5520	768	5520	-768	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGGCCCAACCTACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	8924758	8928899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ENSMUSG00000071646.10_8925450_8929181_1	chr19	+	1092	7	ISM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	6211	486	6211	-486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTGTAACTGCCAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	8925449	8929181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ENSMUSG00000071646.10_8925699_8929293_1	chr19	+	1089	6	ISM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	6460	374	6460	-374	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGGGAGGGTTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	8925698	8929293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ENSMUSG00000071646.10_8926415_8929424_1	chr19	+	1058	5	ISM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	7176	243	7176	-243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTATTTTCTAATGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	8926414	8929424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ENSMUSG00000071646.10_8927694_8929667_1	chr19	+	1142	4	ISM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	8455	0	8455	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCAGCTATTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	8927693	8929667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8927754_8928275_8928395_8928499_8928649_8928853
ENSMUSG00000071646.10_8927729_8929667_1	chr19	+	1107	4	ISM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	8490	0	8490	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCAGCTATTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	8927728	8929667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8927754_8928275_8928395_8928499_8928649_8928853
ENSMUSG00000071648.5_8904755_8906448_1	chr19	-	1245	3	FSM	ENSMUSG00000071648.5	ENSMUST00000096242.5	1517	3	272	0	272	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTTCTCCCGCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	8906448	8904754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_8905252_8905341_8905589_8905947
ENSMUSG00000071650.7_8879665_8893105_1	chr19	+	2767	23	ISM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	4194	931	4194	-906	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTCTGAGTTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	8879664	8893105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ENSMUSG00000071650.7_8882316_8893326_1	chr19	+	2794	21	ISM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	6845	710	6845	-685	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAACTGGAGCACAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	8882315	8893326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ENSMUSG00000071650.7_8884679_8893507_1	chr19	+	2764	20	ISM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	9208	529	9208	-504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATCCAAAATGCCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	8884678	8893507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ENSMUSG00000071650.7_8886313_8893688_1	chr19	+	2767	18	ISM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	10842	348	10842	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTCCCATCTTAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	8886312	8893688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ENSMUSG00000071650.7_8886455_8893795_1	chr19	+	2814	17	ISM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	10984	241	10984	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGGTTTCACTGAATCA	NA	NA	NA	NA	NA	NA	NA	NA	8886454	8893795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ENSMUSG00000071650.7_8892328_8893893_1	chr19	+	1194	4	ISM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	16857	143	16857	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTAAGCGGGTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	8892327	8893893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8892403_8892521_8892635_8892767_8892869_8892988
ENSMUSG00000071652.9_8870369_8874620_1	chr19	+	2642	2	FSM	ENSMUSG00000071652.9	ENSMUST00000096249.7	3274	2	0	632	0	-632	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGGTAGCAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	8870368	8874620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_8870513_8872122
ENSMUSG00000071653.10_8866217_8868026_1	chr19	+	587	4	FSM	ENSMUSG00000071653.10	ENSMUST00000096251.10	806	4	0	219	0	-219	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCGAAGAGGACACAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	8866216	8868026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774
ENSMUSG00000071655.13_8849024_8853082_1	chr19	+	1074	9	NNC	ENSMUSG00000071655.13	novel	1291	9	NA	NA	0	54	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGAGGGCAGTTAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	8849023	8853082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852528_8852717_8852885
ENSMUSG00000071655.13_8849024_8853082_2	chr19	+	1079	9	FSM	ENSMUSG00000071655.13	ENSMUST00000238036.2	1291	9	67	145	0	54	multi-exon	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGAGGGCAGTTAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	8849023	8853082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ENSMUSG00000071655.13_8849024_8853227_1	chr19	+	1219	9	NNC	ENSMUSG00000071655.13	novel	1291	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGGGGCTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	8849023	8853227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852528_8852717_8852885
ENSMUSG00000071655.13_8849024_8853227_2	chr19	+	1224	9	FSM	ENSMUSG00000071655.13	ENSMUST00000238036.2	1291	9	67	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGGGGCTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	8849023	8853227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ENSMUSG00000071660.11_8786439_8793280_1	chr19	-	2827	2	ISM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	3417	0	3008	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATGCATCTTAGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	8793280	8786438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_8789203_8793217
ENSMUSG00000071660.11_8786609_8793355_1	chr19	-	2732	2	ISM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	3342	170	2933	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCCCCTGAATGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	8793355	8786608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_8789203_8793217
ENSMUSG00000071660.11_8786886_8796048_1	chr19	-	2749	3	FSM	ENSMUSG00000071660.11	ENSMUST00000088092.6	1585	3	610	-1774	240	-447	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATTCCAGACTAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	8796048	8786885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_8789203_8793217_8793401_8795799
ENSMUSG00000071660.11_8787135_8796697_1	chr19	-	2813	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	0	696	0	-696	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGCTTATTAATAATACCT	NA	NA	NA	NA	NA	NA	NA	NA	8796697	8787134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
ENSMUSG00000071691.12_4676120_4702186_1	chr19	-	667	6	FSM	ENSMUSG00000071691.12	ENST00000527634.5	915	6	119	129	119	-129	multi-exon	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCAAAATCCGCCACGCGC	NA	NA	NA	NA	NA	NA	NA	NA	4702186	4676119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4676270_4687241_4687345_4692140_4692252_4695627_4695750_4699700_4699848_4702152
ENSMUSG00000071691.12_4676181_4702229_1	chr19	-	649	6	FSM	ENSMUSG00000071691.12	ENST00000527634.5	915	6	76	190	76	-190	multi-exon	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGCCCCAACCATGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	4702229	4676180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4676270_4687241_4687345_4692140_4692252_4695627_4695750_4699700_4699848_4702152
ENSMUSG00000071691.12_4676225_4702287_1	chr19	-	663	6	FSM	ENSMUSG00000071691.12	ENST00000527634.5	915	6	18	234	18	-234	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGAATCCATCGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	4702287	4676224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4676270_4687241_4687345_4692140_4692252_4695627_4695750_4699700_4699848_4702152
ENSMUSG00000071708.12_156228962_156230424_1	chrX	-	285	2	ISM	ENSMUSG00000071708.12	ENSMUST00000112529.8	3717	11	44859	2111	44859	-2111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTAATTTTAAAAAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	156230424	156228961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_156229173_156230350
ENSMUSG00000071724.6_76178548_76180737_1	chr15	+	1550	7	FSM	ENSMUSG00000071724.6	ENSMUST00000163991.4	1909	7	0	359	0	-359	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGGGGATGAATGTCGA	NA	NA	NA	NA	NA	NA	NA	NA	76178547	76180737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76179492_76179589_76179663_76179883_76180025_76180094_76180185_76180277_76180342_76180425_76180562_76180635
ENSMUSG00000071724.6_76178857_76181096_1	chr15	+	1600	7	FSM	ENSMUSG00000071724.6	ENSMUST00000163991.4	1909	7	309	0	309	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGGCTCCCTCCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	76178856	76181096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76179492_76179589_76179663_76179883_76180025_76180094_76180185_76180277_76180342_76180425_76180562_76180635
ENSMUSG00000071724.6_76178931_76181096_1	chr15	+	1526	7	FSM	ENSMUSG00000071724.6	ENSMUST00000163991.4	1909	7	383	0	383	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGGCTCCCTCCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	76178930	76181096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76179492_76179589_76179663_76179883_76180025_76180094_76180185_76180277_76180342_76180425_76180562_76180635
ENSMUSG00000071793.13_20035981_20053777_1	chr8	+	1572	4	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	19515	1721	5266	-1721	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACCTGCCCCTTGCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	20035980	20053777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_20036160_20039783_20039904_20041811_20042185_20052877
ENSMUSG00000071793.13_20036109_20053905_1	chr8	+	1572	4	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	19643	1593	5394	-1593	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTGCAGGATCGGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	20036108	20053905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_20036160_20039783_20039904_20041811_20042185_20052877
ENSMUSG00000071793.13_20041895_20054129_1	chr8	+	1542	2	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	25429	1369	11180	-1369	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGAGGCCAGCCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	20041894	20054129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_20042185_20052877
ENSMUSG00000071793.13_20042051_20054280_1	chr8	+	1537	2	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	25585	1218	11336	-1218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATGCACACTGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	20042050	20054280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_20042185_20052877
ENSMUSG00000071796.14_20157798_20169830_1	chr8	+	1391	4	ISM	ENSMUSG00000071796.14	ENSMUST00000153748.2	4659	5	13950	3164	-216	-3164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCATGAGAACTCCGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	20157797	20169830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_20158000_20163109_20163409_20167037_20167158_20169060
ENSMUSG00000071796.14_20163109_20169989_1	chr8	+	1350	3	ISM	ENSMUSG00000071796.14	ENSMUST00000150051.8	936	6	5095	8678	5095	-3005	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCTATACTAGTATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	20163108	20169989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_20163409_20167037_20167158_20169059
ENSMUSG00000071796.14_20163109_20170091_1	chr8	+	1452	3	ISM	ENSMUSG00000071796.14	ENSMUST00000150051.8	936	6	5095	8576	5095	-2903	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAACCGGCAATA	NA	NA	NA	NA	NA	NA	NA	NA	20163108	20170091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_20163409_20167037_20167158_20169059
ENSMUSG00000071796.14_20167059_20170368_1	chr8	+	1407	2	ISM	ENSMUSG00000071796.14	ENSMUST00000153748.2	4659	5	23211	2626	9045	-2626	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTAAAATGTTTAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	20167058	20170368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_20167158_20169060
ENSMUSG00000071796.14_20167132_20170404_1	chr8	+	1370	2	ISM	ENSMUSG00000071796.14	ENSMUST00000153748.2	4659	5	23284	2590	9118	-2590	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATGAGTGTGTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	20167131	20170404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_20167158_20169060
ENSMUSG00000071862.4_35345190_35347933_1	chr18	-	1081	2	FSM	ENSMUSG00000071862.4	ENST00000521094.2	1188	2	107	0	107	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCTTGGCTTAATAAAC	NA	NA	NA	NA	NA	NA	NA	NA	35347933	35345189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_35345983_35347645
ENSMUSG00000071866.13_6365630_6369184_1	chr11	+	542	4	ISM	ENSMUSG00000071866.13	ENSMUST00000132846.2	1170	5	187	633	187	-620	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATCCTAAAGCATACAGG	NA	NA	NA	NA	NA	NA	NA	NA	6365629	6369184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112
ENSMUSG00000071866.13_6365704_6369184_2	chr11	+	468	4	ISM	ENSMUSG00000071866.13	ENSMUST00000132846.2	1170	5	261	633	-203	-620	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATCCTAAAGCATACAGG	NA	NA	NA	NA	NA	NA	NA	NA	6365703	6369184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112
ENSMUSG00000071866.13_6365756_6369184_1	chr11	+	410	3	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	-151	-620	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATCCTAAAGCATACAGG	NA	NA	NA	NA	NA	NA	NA	NA	6365755	6369184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_6366005_6368225_6368315_6369112
ENSMUSG00000071866.13_6365756_6369184_2	chr11	+	416	4	ISM	ENSMUSG00000071866.13	ENSMUST00000132846.2	1170	5	313	633	-151	-620	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATCCTAAAGCATACAGG	NA	NA	NA	NA	NA	NA	NA	NA	6365755	6369184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112
ENSMUSG00000071866.13_6365868_6369286_1	chr11	+	400	3	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	-39	-518	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAACAGTGAATGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	6365867	6369286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_6366005_6368225_6368315_6369112
ENSMUSG00000071866.13_6365868_6369511_1	chr11	+	439	5	FSM	ENSMUSG00000071866.13	ENSMUST00000132846.2	1170	5	425	306	-39	-293	multi-exon	FALSE	canonical	NA	NA	NA	NA	4286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGGCATGAACATTGT	NA	NA	NA	NA	NA	NA	NA	NA	6365867	6369511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112_6369286_6369477
ENSMUSG00000071866.13_6365868_6369561_1	chr11	+	489	5	FSM	ENSMUSG00000071866.13	ENSMUST00000132846.2	1170	5	425	256	-39	-243	multi-exon	FALSE	canonical	NA	NA	NA	NA	7191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAAGACCAGCAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	6365867	6369561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112_6369286_6369477
ENSMUSG00000071866.13_6368294_6369804_1	chr11	+	521	3	ISM	ENSMUSG00000071866.13	ENSMUST00000213200.2	1450	5	1982	0	1982	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGAACTGTTTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	6368293	6369804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_6368315_6369112_6369286_6369477
ENSMUSG00000072082.8_24441816_24443955_1	chr17	-	1579	2	ISM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	26428	644	26428	-644	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGTGTCTGCTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	24443955	24441815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24443321_24443881
ENSMUSG00000072082.8_24441931_24445507_1	chr17	-	1619	3	ISM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	24876	759	24876	-759	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTGCTGGGTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	24445507	24441930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24443321_24443881_24444052_24445448
ENSMUSG00000072082.8_24442196_24449343_1	chr17	-	1577	5	ISM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	21040	1024	21040	-1024	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCTTCAACTGAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	24449343	24442195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289
ENSMUSG00000072082.8_24442762_24456137_1	chr17	-	1598	9	ISM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	14246	1590	14246	-1590	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGTCAGGACACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	24456137	24442761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054
ENSMUSG00000072082.8_24442938_24459857_1	chr17	-	1674	11	ISM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	10526	1766	10526	-1766	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGCCTGTAAAGCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	24459857	24442937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752
ENSMUSG00000072082.8_24443193_24461231_1	chr17	-	1591	13	ISM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	9152	2021	9152	-2021	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTCCAGCCTCAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	24461231	24443192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113
ENSMUSG00000072082.8_24443932_24463541_1	chr17	-	1645	14	ISM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	6842	2760	6842	-2760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGCTATGAGGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	24463541	24443931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453
ENSMUSG00000072082.8_24445501_24468355_1	chr17	-	1623	14	ISM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	2028	4329	2028	-4329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGGAGATCCACACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	24468355	24445500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224
ENSMUSG00000072214.8_18441187_18441955_1	chr16	-	564	3	ISM	ENSMUSG00000072214.8	ENSMUST00000232653.2	3678	11	3266	1935	3266	224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCCCCGCCTATCATAA	NA	NA	NA	NA	NA	NA	NA	NA	18441955	18441186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18441547_18441664_18441768_18441854
ENSMUSG00000072214.8_18441302_18442137_1	chr16	-	551	4	ISM	ENSMUSG00000072214.8	ENSMUST00000232653.2	3678	11	3084	2050	3084	109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCCAGATGACCCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	18442137	18441301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_18441547_18441664_18441768_18441854_18441991_18442070
ENSMUSG00000072235.7_98847718_98851300_1	chr15	-	1602	4	FSM	ENSMUSG00000072235.7	ENST00000552924.2	1731	4	130	-1	130	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTGTGTTCTATATT	NA	NA	NA	NA	NA	NA	NA	NA	98851300	98847717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851248
ENSMUSG00000072235.7_98847718_98851432_1	chr15	-	1734	4	FSM	ENSMUSG00000072235.7	ENST00000552924.2	1731	4	-2	-1	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTGTGTTCTATATT	NA	NA	NA	NA	NA	NA	NA	NA	98851432	98847717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851248
ENSMUSG00000072235.7_98847866_98851432_1	chr15	-	1586	4	FSM	ENSMUSG00000072235.7	ENST00000552924.2	1731	4	-2	147	-2	-147	multi-exon	FALSE	canonical	NA	NA	NA	NA	27909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGAAAGTTGTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	98851432	98847865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851248
ENSMUSG00000072235.7_98848256_98849194_1	chr15	-	766	2	ISM	ENSMUSG00000072235.7	ENST00000552924.2	1731	4	2236	537	2236	-537	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCATCCAGTTTGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	98849194	98848255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98848896_98849068
ENSMUSG00000072235.7_98848533_98851432_1	chr15	-	836	4	FSM	ENSMUSG00000072235.7	ENSMUST00000097014.7	1803	4	152	815	-2	-814	multi-exon	FALSE	canonical	NA	NA	NA	NA	6023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGAATGTTGATCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	98851432	98848532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851331
ENSMUSG00000072235.7_98848674_98851432_1	chr15	-	695	4	FSM	ENSMUSG00000072235.7	ENSMUST00000097014.7	1803	4	152	956	-2	-955	multi-exon	FALSE	canonical	NA	NA	NA	NA	2211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCCTTCATGGTAGACAA	NA	NA	NA	NA	NA	NA	NA	NA	98851432	98848673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851331
ENSMUSG00000072235.7_98848747_98851584_1	chr15	-	774	4	FSM	ENSMUSG00000072235.7	ENSMUST00000097014.7	1803	4	0	1029	0	-1028	multi-exon	FALSE	canonical	NA	NA	NA	NA	2890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTTTCCACTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	98851584	98848746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851331
ENSMUSG00000072235.7_98848780_98849462_1	chr15	-	403	3	ISM	ENSMUSG00000072235.7	ENST00000679733.1	1701	4	1968	1089	1968	-1061	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAAGCTGGAGTTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	98849462	98848779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98848896_98849068_98849218_98849324
ENSMUSG00000072258.12_183170325_183190899_1	chr1	+	2263	11	FSM	ENSMUSG00000072258.12	ENSMUST00000192076.3	2384	11	0	121	0	-121	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATTCCAGGAAGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	183170324	183190899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
ENSMUSG00000072258.12_183170428_183191020_1	chr1	+	2281	11	FSM	ENSMUSG00000072258.12	ENSMUST00000192076.3	2384	11	103	0	103	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTAGTATTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	183170427	183191020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
ENSMUSG00000072501.6_66449454_66481791_1	chr15	+	1466	8	ISM	ENSMUSG00000072501.6	ENSMUST00000230948.2	6584	20	25	35313	-23	-842	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTGACATCCAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	66449453	66481791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374
ENSMUSG00000072501.6_66449454_66481867_1	chr15	+	1542	8	ISM	ENSMUSG00000072501.6	ENSMUST00000230948.2	6584	20	25	35237	-23	-766	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGAATTGATCAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	66449453	66481867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374
ENSMUSG00000072501.6_66449613_66481897_1	chr15	+	1413	8	ISM	ENSMUSG00000072501.6	ENSMUST00000230948.2	6584	20	184	35207	-30	-736	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTAGGATGTATATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	66449612	66481897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374
ENSMUSG00000072501.6_66449618_66483465_1	chr15	+	3054	9	FSM	ENSMUSG00000072501.6	ENSMUST00000230882.2	3263	9	209	0	-25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGCTCTAATTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	66449617	66483465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374
ENSMUSG00000072501.6_66451951_66482011_1	chr15	+	1410	7	ISM	ENSMUSG00000072501.6	ENST00000337920.8	2281	8	2474	622	33	-622	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGCCTTGGCTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	66451950	66482011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374
ENSMUSG00000072501.6_66452005_66482060_1	chr15	+	1405	7	ISM	ENSMUSG00000072501.6	ENST00000337920.8	2281	8	2528	573	87	-573	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCATGCTTTTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	66452004	66482060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374
ENSMUSG00000072501.6_66466964_66482277_1	chr15	+	1417	5	ISM	ENSMUSG00000072501.6	ENST00000337920.8	2281	8	17487	356	15046	-356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGATAACCCAAATTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	66466963	66482277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374
ENSMUSG00000072501.6_66476011_66482633_1	chr15	+	1464	3	ISM	ENSMUSG00000072501.6	ENST00000337920.8	2281	8	26534	0	24093	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAATGTCAATCTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	66476010	66482633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_66476090_66476628_66476755_66481374
ENSMUSG00000072501.6_66485023_66500853_1	chr15	+	741	6	ISM	ENSMUSG00000072501.6	ENST00000395390.6	5108	19	33105	15040	33105	-15040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTCCACGAAGCACATT	NA	NA	NA	NA	NA	NA	NA	NA	66485022	66500853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773
ENSMUSG00000072501.6_66487178_66501794_1	chr15	+	766	6	ISM	ENSMUSG00000072501.6	ENST00000395390.6	5108	19	35260	14099	35260	-14099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAACTGGATGAGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	66487177	66501794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648
ENSMUSG00000072571.4_52254351_52256976_1	chr14	+	929	7	NIC	ENSMUSG00000072571.4	novel	1218	7	NA	NA	0	169	combination_of_known_junctions	TRUE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGCATTCTTCGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	52254350	52256976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_+_52254399_52254512_52254655_52255207_52255319_52255410_52255468_52255998_52256116_52256195_52256336_52256662
ENSMUSG00000072571.4_52254511_52257145_2	chr14	+	1052	6	ISM	ENSMUSG00000072571.4	ENST00000556585.2	1218	7	189	87	135	-87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCCTAATTCACCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	52254510	52257145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_52254655_52255207_52255319_52255410_52255468_52255998_52256116_52256195_52256336_52256662
ENSMUSG00000072571.4_52254542_52257145_1	chr14	+	1015	6	NIC	ENSMUSG00000072571.4	novel	1218	7	NA	NA	166	-87	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	946	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCCTAATTCACCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	52254541	52257145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_+_52254655_52255207_52255319_52255410_52255468_52255998_52256110_52256195_52256336_52256662
ENSMUSG00000072571.4_52254619_52257145_1	chr14	+	938	6	NIC	ENSMUSG00000072571.4	novel	1218	7	NA	NA	243	-87	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCCTAATTCACCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	52254618	52257145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_+_52254655_52255207_52255319_52255410_52255468_52255998_52256110_52256195_52256336_52256662
ENSMUSG00000072571.4_52255207_52257251_1	chr14	+	1009	5	NIC	ENSMUSG00000072571.4	novel	1234	7	NA	NA	831	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	831	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGACGCCAGGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	52255206	52257251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_+_52255319_52255410_52255468_52255998_52256110_52256195_52256336_52256662
ENSMUSG00000072623.7_118441652_118444279_1	chr6	-	946	3	FSM	ENSMUSG00000072623.7	ENST00000302609.8	1351	3	50	355	50	-355	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACCTTTCGAATGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	118444279	118441651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_118442428_118443791_118443882_118444199
ENSMUSG00000072653.15_47922363_47929076_1	chr6	+	1124	4	ISM	ENSMUSG00000072653.15	ENST00000434415.6	1145	5	2100	-80	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	782	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGCACTGTCTCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	47922362	47929076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_47922686_47922770_47922897_47923595_47923686_47928491
ENSMUSG00000072653.15_47922363_47929076_2	chr6	+	1121	4	NNC	ENSMUSG00000072653.15	novel	1479	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGCACTGTCTCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	47922362	47929076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_47922686_47922770_47922897_47923595_47923686_47928494
ENSMUSG00000072676.13_25924594_25926325_1	chr14	-	902	3	ISM	ENSMUSG00000072676.13	ENSMUST00000100811.6	1108	4	1349	0	1349	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTCTCTTGATCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	25926325	25924593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_25925332_25925945_25926006_25926221
ENSMUSG00000072676.13_25924923_25928067_1	chr14	-	919	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	29	1199	29	-329	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACACTAGATTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	25928067	25924922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
ENSMUSG00000072694.9_114946635_114951894_1	chr5	-	812	2	FSM	ENSMUSG00000072694.9	ENSMUST00000112160.4	1333	2	143	378	143	-378	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGAAGGTTCTGGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	114951894	114946634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_114947393_114951840
ENSMUSG00000072772.4_124716149_124717547_1	chr6	-	294	2	ISM	ENSMUSG00000072772.4	ENSMUST00000004389.6	863	3	790	3	790	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGTGTCAGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	124717547	124716148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124716377_124717481
ENSMUSG00000072845.4_86559490_86576485_1	chr5	-	981	5	ISM	ENSMUSG00000072845.4	ENST00000508048.6	1142	6	3285	0	3285	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATTTCAGAATCGCA	NA	NA	NA	NA	NA	NA	NA	NA	86576485	86559489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_86559783_86562335_86562479_86567860_86568121_86570352_86570525_86576372
ENSMUSG00000072845.4_86559490_86579750_1	chr5	-	1122	6	FSM	ENSMUSG00000072845.4	ENST00000508048.6	1142	6	20	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATTTCAGAATCGCA	NA	NA	NA	NA	NA	NA	NA	NA	86579750	86559489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_86559783_86562335_86562479_86567860_86568121_86570352_86570525_86576372_86576578_86579701
ENSMUSG00000072941.6_52521133_52525569_1	chr5	+	547	2	FSM	ENSMUSG00000072941.6	ENSMUST00000101208.6	3738	2	0	3191	0	-3191	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCAGATCACCGGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	52521132	52525569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_52521395_52525284
ENSMUSG00000072946.13_84332006_84352853_1	chr12	+	966	6	ISM	ENSMUSG00000072946.13	ENSMUST00000147363.8	1869	9	-142	3874	0	-3874	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGTCTACTTTGACAAT	NA	NA	NA	NA	NA	NA	NA	NA	84332005	84352853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699
ENSMUSG00000072946.13_84332174_84354614_1	chr12	+	919	7	ISM	ENSMUSG00000072946.13	ENSMUST00000147363.8	1869	9	26	2113	0	-2113	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCTCCACTGCCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	84332173	84354614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549
ENSMUSG00000072946.13_84339089_84355206_1	chr12	+	956	7	ISM	ENSMUSG00000072946.13	ENSMUST00000147363.8	1869	9	6941	1521	6909	-1521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAACTTTTGCTCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	84339088	84355206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118
ENSMUSG00000072946.13_84342065_84360747_1	chr12	+	905	8	ISM	ENSMUSG00000072946.13	ENSMUST00000146377.8	2073	10	9885	881	9885	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAGATCGTCTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	84342064	84360747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ENSMUSG00000072946.13_84344811_84360876_1	chr12	+	963	7	ISM	ENSMUSG00000072946.13	ENSMUST00000146377.8	2073	10	12631	752	12631	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTCTTGATTCTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	84344810	84360876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ENSMUSG00000072946.13_84344890_84360933_1	chr12	+	941	7	ISM	ENSMUSG00000072946.13	ENSMUST00000146377.8	2073	10	12710	695	12710	57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATCATATTCACTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	84344889	84360933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ENSMUSG00000072946.13_84349094_84361071_1	chr12	+	909	6	ISM	ENSMUSG00000072946.13	ENSMUST00000146377.8	2073	10	16914	557	16914	195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAAATTACAGTTATAAG	NA	NA	NA	NA	NA	NA	NA	NA	84349093	84361071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ENSMUSG00000072946.13_84349136_84361144_1	chr12	+	940	6	ISM	ENSMUSG00000072946.13	ENSMUST00000146377.8	2073	10	16956	484	16956	268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGGTGGGTGTATTAG	NA	NA	NA	NA	NA	NA	NA	NA	84349135	84361144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ENSMUSG00000072946.13_84352803_84361259_1	chr12	+	906	5	ISM	ENSMUSG00000072946.13	ENSMUST00000146377.8	2073	10	20623	369	20623	-369	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACACTGGCCTCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	84352802	84361259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ENSMUSG00000072946.13_84352854_84361325_1	chr12	+	921	5	ISM	ENSMUSG00000072946.13	ENSMUST00000146377.8	2073	10	20674	303	20674	-303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTATGCCTGATTATT	NA	NA	NA	NA	NA	NA	NA	NA	84352853	84361325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ENSMUSG00000072946.13_84354643_84361478_1	chr12	+	925	4	ISM	ENSMUSG00000072946.13	ENSMUST00000146377.8	2073	10	22463	150	22463	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTGTTTGTGAAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	84354642	84361478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84354672_84355118_84355207_84357692_84357733_84360710
ENSMUSG00000072946.13_84355187_84361628_1	chr12	+	978	3	ISM	ENSMUSG00000072946.13	ENSMUST00000146377.8	2073	10	23007	0	23007	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGTGAGAAGCAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	84355186	84361628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_84355207_84357692_84357733_84360710
ENSMUSG00000072969.3_134645262_134646679_1	chrX	+	1270	2	FSM	ENSMUSG00000072969.3	ENST00000604957.1	2776	2	119	1387	119	-1387	multi-exon	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGAAGAACCTGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	134645261	134646679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_134646391_134646538
ENSMUSG00000072969.3_134645353_134646771_1	chrX	+	1271	2	FSM	ENSMUSG00000072969.3	ENST00000604957.1	2776	2	210	1295	210	-1295	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTGAGGAACCGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	134645352	134646771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_134646391_134646538
ENSMUSG00000072969.3_134645362_134646779_1	chrX	+	1266	2	NNC	ENSMUSG00000072969.3	novel	2776	2	NA	NA	219	-1287	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCGCAGCCATCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	134645361	134646779	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_134646391_134646542
ENSMUSG00000072969.3_134645610_134647026_1	chrX	+	1265	2	NNC	ENSMUSG00000072969.3	novel	2776	2	NA	NA	-56	-1040	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTAACGAGGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	134645609	134647026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_134646391_134646542
ENSMUSG00000072969.3_134645675_134647091_1	chrX	+	1269	2	FSM	ENSMUSG00000072969.3	ENST00000246174.6	2253	2	9	975	9	-975	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCCATTTACTCAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	134645674	134647091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_134646391_134646538
ENSMUSG00000072969.3_134645791_134647200_1	chrX	+	1258	2	NNC	ENSMUSG00000072969.3	novel	2776	2	NA	NA	125	-866	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACCCTGATGCCCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	134645790	134647200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_134646391_134646542
ENSMUSG00000072980.4_119440706_119448712_1	chr2	-	590	6	FSM	ENSMUSG00000072980.4	ENSMUST00000123818.2	1082	6	238	254	238	-254	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCCCTTGTGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	119448712	119440705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
ENSMUSG00000072980.4_119440761_119448767_1	chr2	-	590	6	FSM	ENSMUSG00000072980.4	ENSMUST00000123818.2	1082	6	183	309	183	-309	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCATAATGCCTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	119448767	119440760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
ENSMUSG00000072980.4_119440818_119448827_1	chr2	-	593	6	FSM	ENSMUSG00000072980.4	ENSMUST00000123818.2	1082	6	123	366	123	-366	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACCAAAGATCCTGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	119448827	119440817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
ENSMUSG00000072980.4_119442289_119448950_1	chr2	-	632	5	ISM	ENSMUSG00000072980.4	ENSMUST00000123818.2	1082	6	0	1837	0	-1837	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTTCTGAAGGGAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	119448950	119442288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
ENSMUSG00000073008.12_106299855_106336528_1	chrX	+	1237	3	FSM	ENSMUSG00000073008.12	ENST00000645147.2	3093	3	190	1666	-129	-1666	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGAAGATTTTGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	106299854	106336528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_106300106_106312487_106312574_106335628
ENSMUSG00000073008.12_106299984_106336644_1	chrX	+	1224	3	FSM	ENSMUSG00000073008.12	ENST00000645147.2	3093	3	319	1550	0	-1550	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCTCCTCAGAACCAATG	NA	NA	NA	NA	NA	NA	NA	NA	106299983	106336644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_106300106_106312487_106312574_106335628
ENSMUSG00000073008.12_106312490_106336835_1	chrX	+	1291	2	ISM	ENSMUSG00000073008.12	ENST00000645147.2	3093	3	12825	1359	12506	-1359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCATTTCTCAACATCTT	NA	NA	NA	NA	NA	NA	NA	NA	106312489	106336835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_106312574_106335628
ENSMUSG00000073077.8_78445231_78472265_1	chrX	-	737	6	ISM	ENSMUSG00000073077.8	ENSMUST00000179788.2	1254	9	5759	0	1323	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACCTTCATATCTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	78472265	78445230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78445351_78445626_78445722_78454041_78454235_78459090_78459214_78460414_78460497_78472141
ENSMUSG00000073077.8_78445231_78472363_1	chrX	-	835	6	ISM	ENSMUSG00000073077.8	ENSMUST00000179788.2	1254	9	5661	0	1225	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACCTTCATATCTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	78472363	78445230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78445351_78445626_78445722_78454041_78454235_78459090_78459214_78460414_78460497_78472141
ENSMUSG00000073077.8_78445627_78473500_1	chrX	-	789	6	ISM	ENSMUSG00000073077.8	ENSMUST00000179788.2	1254	9	4524	396	88	-380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGTTACTTCATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	78473500	78445626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78445722_78454041_78454235_78459090_78459214_78460414_78460497_78472141_78472364_78473426
ENSMUSG00000073077.8_78532241_78534786_1	chrX	-	485	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	24820	6041	24820	-6041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTGTTGAAAACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	78534786	78532240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78532354_78532640_78532858_78534536_78534626_78534720
ENSMUSG00000073077.8_78532264_78534876_1	chrX	-	552	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	24730	6064	24730	-6064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATTGTATTGAGACCAC	NA	NA	NA	NA	NA	NA	NA	NA	78534876	78532263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78532354_78532640_78532858_78534536_78534626_78534720
ENSMUSG00000073077.8_78532329_78534914_1	chrX	-	525	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	24692	6129	24692	-6129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTGGTGGACACATATT	NA	NA	NA	NA	NA	NA	NA	NA	78534914	78532328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78532354_78532640_78532858_78534536_78534626_78534720
ENSMUSG00000073077.8_78532693_78537334_1	chrX	-	502	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	22272	6493	22272	-6493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATATATTTCGATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	78537334	78532692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78532858_78534536_78534626_78534720_78534918_78537283
ENSMUSG00000073077.8_78532803_78540235_1	chrX	-	556	5	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	19371	6603	19371	-6603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCATATTGTTAATATGC	NA	NA	NA	NA	NA	NA	NA	NA	78540235	78532802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78532858_78534536_78534626_78534720_78534918_78537283_78537437_78540173
ENSMUSG00000073077.8_78534787_78541520_1	chrX	-	526	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	18086	8587	18086	-8587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACAGATTGTTAAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	78541520	78534786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78534918_78537283_78537437_78540173_78540391_78541495
ENSMUSG00000073077.8_78534826_78541587_1	chrX	-	554	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	18019	8626	18019	-8626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAATACCTCCATCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	78541587	78534825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78534918_78537283_78537437_78540173_78540391_78541495
ENSMUSG00000073077.8_78534896_78541618_1	chrX	-	515	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	17988	8696	17988	-8696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTAGATATTGGCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	78541618	78534895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78534918_78537283_78537437_78540173_78540391_78541495
ENSMUSG00000073077.8_78537398_78548782_1	chrX	-	499	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	10824	11198	10824	-11198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGATTATGAATACACTG	NA	NA	NA	NA	NA	NA	NA	NA	78548782	78537397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78537437_78540173_78540391_78541495_78541686_78548729
ENSMUSG00000073077.8_78540251_78548928_1	chrX	-	529	3	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	10678	14051	10678	-14051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAAGAATGCACTGATTGC	NA	NA	NA	NA	NA	NA	NA	NA	78548928	78540250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78540391_78541495_78541686_78548729
ENSMUSG00000073077.8_78540360_78551595_1	chrX	-	525	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	8011	14160	8011	-14160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTTGTGGCTAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	78551595	78540359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78540391_78541495_78541686_78548729_78548966_78551527
ENSMUSG00000073077.8_78541525_78553500_1	chrX	-	544	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	6106	15325	6106	-15325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGAAAGTTGGAGTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	78553500	78541524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78541686_78548729_78548966_78551527_78551656_78553481
ENSMUSG00000073077.8_78541596_78553542_1	chrX	-	515	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	6064	15396	6064	-15396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGGTCTTTGTCAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	78553542	78541595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78541686_78548729_78548966_78551527_78551656_78553481
ENSMUSG00000073077.8_78541651_78553589_1	chrX	-	507	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	6017	15451	6017	-15451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATTTAAAGTAAAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	78553589	78541650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78541686_78548729_78548966_78551527_78551656_78553481
ENSMUSG00000073077.8_78548808_78553951_1	chrX	-	504	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	5655	22608	5655	-22608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGATGTACCATTTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	78553951	78548807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78548966_78551527_78551656_78553481_78553643_78553894
ENSMUSG00000073077.8_78548858_78554006_1	chrX	-	509	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	5600	22658	5600	-22658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCAGATATTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	78554006	78548857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78548966_78551527_78551656_78553481_78553643_78553894
ENSMUSG00000073077.8_78548908_78554060_1	chrX	-	513	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	5546	22708	5546	-22708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTTTGATCCAGGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	78554060	78548907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78548966_78551527_78551656_78553481_78553643_78553894
ENSMUSG00000073077.8_78551593_78556319_1	chrX	-	523	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	3287	25393	3287	-25393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTGATTCTGTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	78556319	78551592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78551656_78553481_78553643_78553894_78554124_78556249
ENSMUSG00000073077.8_78553502_78558200_1	chrX	-	525	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	1406	27302	1406	-27302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTGTTTCAGCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	78558200	78553501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78553643_78553894_78554124_78556249_78556389_78558184
ENSMUSG00000073077.8_78553563_78558256_1	chrX	-	520	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	1350	27363	1350	-27363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTATGTCCTGCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	78558256	78553562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78553643_78553894_78554124_78556249_78556389_78558184
ENSMUSG00000073077.8_78553622_78558300_1	chrX	-	505	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	1306	27422	1306	-27422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGATATTGCCATAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	78558300	78553621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78553643_78553894_78554124_78556249_78556389_78558184
ENSMUSG00000073077.8_78553917_78559485_1	chrX	-	495	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	121	27717	121	-27717	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTGTTGGAGAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	78559485	78553916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78554124_78556249_78556389_78558184_78558301_78559452
ENSMUSG00000073077.8_78553924_78559580_1	chrX	-	583	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	26	27724	26	-27724	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGATGATTGTGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	78559580	78553923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78554124_78556249_78556389_78558184_78558301_78559452
ENSMUSG00000073077.8_78554010_78559596_1	chrX	-	513	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	10	27810	10	-27810	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTCTGTGTTCTTCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	78559596	78554009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_78554124_78556249_78556389_78558184_78558301_78559452
ENSMUSG00000073079.7_55127062_55152464_1	chr12	+	1602	13	ISM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	15	9688	15	-7212	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCTGAAGAAACTGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	55127061	55152464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401
ENSMUSG00000073079.7_55127311_55148273_1	chr12	+	851	7	ISM	ENSMUSG00000073079.7	ENST00000546080.6	2035	14	78	11779	17	-11403	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATCAGTTGGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	55127310	55148273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55127522_55135954_55136065_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124
ENSMUSG00000073079.7_55127311_55160052_1	chr12	+	2039	15	NNC	ENSMUSG00000073079.7	novel	2061	15	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATAAGTTAAAGGGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	55127310	55160052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_55127522_55135954_55136065_55136920_55137008_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151980_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ENSMUSG00000073079.7_55127311_55160052_2	chr12	+	2040	15	NNC	ENSMUSG00000073079.7	novel	2061	15	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATAAGTTAAAGGGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	55127310	55160052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_55127522_55135954_55136065_55136920_55137008_55142599_55142705_55143897_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ENSMUSG00000073079.7_55127311_55160052_3	chr12	+	2044	15	FSM	ENSMUSG00000073079.7	ENST00000678627.1	2061	15	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATAAGTTAAAGGGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	55127310	55160052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_55127522_55135954_55136065_55136920_55137008_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ENSMUSG00000073079.7_55127311_55160052_4	chr12	+	2042	15	NNC	ENSMUSG00000073079.7	novel	2061	15	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATAAGTTAAAGGGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	55127310	55160052	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_55127522_55135954_55136065_55136920_55137008_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152403_55152511_55155286_55155458_55157870_55157967_55159584
ENSMUSG00000073079.7_55127345_55157923_1	chr12	+	1589	15	ISM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	298	4229	51	-1753	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGGCCAAAATGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	55127344	55157923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870
ENSMUSG00000073079.7_55127453_55148661_1	chr12	+	763	8	ISM	ENSMUSG00000073079.7	ENST00000546080.6	2035	14	220	11391	159	-11015	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTTGAACCTTTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55127452	55148661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55127522_55135954_55136065_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607
ENSMUSG00000073079.7_55135987_55149341_1	chr12	+	798	8	ISM	ENSMUSG00000073079.7	ENST00000546080.6	2035	14	8754	10711	0	-10335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTAGCAAAATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	55135986	55149341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55136065_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252
ENSMUSG00000073079.7_55146787_55160259_1	chr12	+	1524	9	ISM	ENSMUSG00000073079.7	ENSMUST00000021407.11	1515	15	10800	-583	10800	207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTACAGTTCGTAATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	55146786	55160259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ENSMUSG00000073096.12_48533904_48545880_1	chr6	+	935	2	ISM	ENSMUSG00000073096.12	ENSMUST00000114545.8	2913	3	2174	1776	2165	-1775	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCAGGCCAGCGATAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	48533903	48545880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_48534029_48545070
ENSMUSG00000073131.13_70860364_70865932_1	chrX	+	1815	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	0	2380	0	-2380	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTCTTGTTTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	70860363	70865932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_70860547_70863673_70863784_70864410
ENSMUSG00000073131.13_70863671_70866130_1	chrX	+	1833	2	ISM	ENSMUSG00000073131.13	ENSMUST00000114575.4	4290	3	3275	2182	3275	-2182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTTATTGTTATAAAC	NA	NA	NA	NA	NA	NA	NA	NA	70863670	70866130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_70863784_70864410
ENSMUSG00000073139.10_69504145_69506627_1	chrX	-	1055	3	ISM	ENSMUSG00000073139.10	ENSMUST00000114630.3	1307	7	14159	-420	14159	420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACAGCAGGTTTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	69506627	69504144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_69504899_69505796_69505921_69506450
ENSMUSG00000073139.10_69504279_69510797_1	chrX	-	959	4	ISM	ENSMUSG00000073139.10	ENSMUST00000101506.10	2429	6	9989	920	9989	286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGGCTCAGCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	69510797	69504278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_69504899_69505796_69505921_69506450_69506628_69510759
ENSMUSG00000073139.10_69504783_69520748_1	chrX	-	967	6	FSM	ENSMUSG00000073139.10	ENSMUST00000101506.10	2429	6	38	1424	38	-218	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCCCAGTTCCAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	69520748	69504782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_69504899_69505796_69505921_69506450_69506628_69510759_69510968_69513723_69513901_69520583
ENSMUSG00000073139.10_69504838_69520786_1	chrX	-	950	6	FSM	ENSMUSG00000073139.10	ENSMUST00000101506.10	2429	6	0	1479	0	-273	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTATGGAAACATTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	69520786	69504837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_69504899_69505796_69505921_69506450_69506628_69510759_69510968_69513723_69513901_69520583
ENSMUSG00000073147.4_23587306_23589383_1	chr5	-	462	2	ISM	ENSMUSG00000073147.4	ENSMUST00000185943.2	1477	7	48939	0	48924	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAACTATGTCTTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	23589383	23587305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_23587528_23589143
ENSMUSG00000073155.13_35229651_35239737_1	chr6	+	1765	3	FSM	ENSMUSG00000073155.13	ENSMUST00000152147.8	2521	3	62	694	0	-694	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGACCAGGCTGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	35229650	35239737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_35229718_35237344_35237399_35238093
ENSMUSG00000073155.13_35229667_35238439_1	chr6	+	541	4	FSM	ENSMUSG00000073155.13	ENSMUST00000130875.8	690	4	16	133	16	-133	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTACCGCCTACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	35229666	35238439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_35229718_35229890_35229981_35237344_35237399_35238093
ENSMUSG00000073411.13_35481706_35482981_1	chr17	+	894	3	ISM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	0	3494	0	-3348	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGCAGAGTGGTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	35481705	35482981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35482163_35482354_35482625_35482814
ENSMUSG00000073411.13_35482072_35484827_1	chr17	+	705	4	ISM	ENSMUSG00000073411.13	ENSMUST00000172503.3	1744	7	0	1502	0	-1502	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCTTCTACCCTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	35482071	35484827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759
ENSMUSG00000073411.13_35482072_35485035_1	chr17	+	913	4	ISM	ENSMUSG00000073411.13	ENSMUST00000172503.3	1744	7	0	1294	0	-1294	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGAGGGTGTGGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	35482071	35485035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759
ENSMUSG00000073411.13_35482581_35485878_1	chr17	+	822	7	ISM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	875	597	509	-451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTGTTCAGGTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	35482580	35485878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
ENSMUSG00000073411.13_35482908_35486022_1	chr17	+	817	5	NNC	ENSMUSG00000073411.13	novel	2102	8	NA	NA	836	-307	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTGTTCCCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	35482907	35486022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35483091_35484759_35485036_35485162_35485301_35485663_35485703_35485841
ENSMUSG00000073411.13_35482932_35486030_1	chr17	+	813	6	ISM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	1226	445	860	-299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCCTTCCATAGCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	35482931	35486030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
ENSMUSG00000073411.13_35482977_35486098_1	chr17	+	824	5	NNC	ENSMUSG00000073411.13	novel	2102	8	NA	NA	905	-231	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTACCCTGAGCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	35482976	35486098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35483091_35484759_35485036_35485162_35485301_35485663_35485703_35485841
ENSMUSG00000073411.13_35482994_35486100_1	chr17	+	821	6	ISM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	1288	375	922	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACCCTGAGCTGCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	35482993	35486100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
ENSMUSG00000073411.13_35484755_35486228_2	chr17	+	857	5	ISM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	3049	247	2683	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTCACAACCATCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	35484754	35486228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
ENSMUSG00000073411.13_35485162_35486475_2	chr17	+	824	4	ISM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	3456	0	3090	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCACTATGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35485161	35486475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_35485280_35485457_35485491_35485663_35485703_35485841
ENSMUSG00000073422.12_34245007_34247232_1	chr17	-	1618	5	ISM	ENSMUSG00000092595.3	ENSMUST00000168978.3	3711	11	3322	-1	3322	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	34247232	34245006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34246076_34246176
ENSMUSG00000073422.12_34245089_34247291_1	chr17	-	1595	5	ISM	ENSMUSG00000092595.3	ENSMUST00000168978.3	3711	11	3263	81	3263	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGTGGCTCAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	34247291	34245088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34246076_34246176
ENSMUSG00000073423.11_33848101_33850562_1	chr17	+	1046	7	FSM	ENSMUSG00000073423.11	ENSMUST00000166627.8	1211	7	37	128	37	-128	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTGCGTGCAGGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	33848100	33850562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_33848191_33848595_33848673_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ENSMUSG00000073423.11_33848595_33850664_1	chr17	+	1059	6	ISM	ENSMUSG00000073423.11	ENSMUST00000166627.8	1211	7	531	26	531	-26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACATGATTTTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	33848594	33850664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_33848673_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ENSMUSG00000073435.11_25115725_25116505_1	chr17	+	541	4	FSM	ENSMUSG00000073435.11	ENST00000563498.1	586	4	245	-200	245	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTGTTAAGACATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	25115724	25116505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25115733_25115825_25115928_25116001_25116115_25116187
ENSMUSG00000073436.12_25111454_25113650_1	chr17	-	895	7	ISM	ENSMUSG00000073436.12	ENSMUST00000121542.2	1521	8	411	328	379	-328	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACAACAGGACAAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	25113650	25111453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_25111658_25111728_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544
ENSMUSG00000073468.13_8529934_8546274_2	chr17	+	1040	7	NNC	ENSMUSG00000073468.13	novel	1049	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGGATCAACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	8529933	8546274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8539514_8540631_8540668_8542108_8542189_8545786
ENSMUSG00000073471.4_8164446_8197636_1	chr17	+	1520	7	ISM	ENSMUSG00000073471.4	ENSMUST00000097423.3	2189	8	-39	1020	0	-1020	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTACTCTGAGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	8164445	8197636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_8165136_8171380_8171469_8188978_8189121_8191655_8191802_8192768_8192973_8194876_8195040_8197549
ENSMUSG00000073471.4_8164690_8198237_1	chr17	+	1565	8	FSM	ENSMUSG00000073471.4	ENSMUST00000097423.3	2189	8	205	419	205	-419	multi-exon	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGCTTTACAAACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	8164689	8198237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_8165136_8171380_8171469_8188978_8189121_8191655_8191802_8192768_8192973_8194876_8195040_8197549_8197637_8197948
ENSMUSG00000073471.4_8171381_8198657_1	chr17	+	1539	7	ISM	ENSMUSG00000073471.4	ENSMUST00000097423.3	2189	8	6896	-1	6896	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGTCTGACAAGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	8171380	8198657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_8171469_8188978_8189121_8191655_8191802_8192768_8192973_8194876_8195040_8197549_8197637_8197948
ENSMUSG00000073481.10_184545957_184564803_1	chr1	-	436	5	ISM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	13275	692	13275	-692	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAATGTGAGGCTGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	184564803	184545956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184564772
ENSMUSG00000073481.10_184546057_184564913_1	chr1	-	446	5	ISM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	13165	792	13165	-792	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGAGTCCTCATGGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	184564913	184546056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184564772
ENSMUSG00000073481.10_184554572_184573470_1	chr1	-	424	5	ISM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	4608	9307	4608	-9307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCATAGACAGGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	184573470	184554571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184554604_184554685_184554748_184564772_184564914_184566056_184566226_184573450
ENSMUSG00000073481.10_184564873_184577778_1	chr1	-	420	4	ISM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	300	19608	300	-19608	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCTTAGTCGATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	184577778	184564872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184564914_184566056_184566226_184573450_184573625_184577742
ENSMUSG00000073481.10_184573450_184578005_1	chr1	-	438	2	ISM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	73	28185	73	-28185	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGCTTGCGGGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	184578005	184573449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_184573625_184577742
ENSMUSG00000073489.7_173574859_173587051_1	chr1	-	1563	6	ISM	ENSMUSG00000073489.7	ENSMUST00000111214.4	2296	9	7434	0	7434	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGCCTTTGGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	173587051	173574858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173575187_173576760_173576950_173579193_173579611_173580275_173580465_173583172_173583596_173587034
ENSMUSG00000073489.7_173575014_173587097_1	chr1	-	1454	6	ISM	ENSMUSG00000073489.7	ENSMUST00000111214.4	2296	9	7388	155	7388	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCTCTTAATTCTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	173587097	173575013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173575187_173576760_173576950_173579193_173579611_173580275_173580465_173583172_173583596_173587034
ENSMUSG00000073489.7_173575086_173587165_1	chr1	-	1450	6	ISM	ENSMUSG00000073489.7	ENSMUST00000111214.4	2296	9	7320	227	7320	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTGGAGATAAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	173587165	173575085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173575187_173576760_173576950_173579193_173579611_173580275_173580465_173583172_173583596_173587034
ENSMUSG00000073489.7_173576847_173587832_1	chr1	-	1428	6	ISM	ENSMUSG00000073489.7	ENSMUST00000111214.4	2296	9	6653	1988	6653	-1988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTAAACTAAGACTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	173587832	173576846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173576950_173579193_173579611_173580275_173580465_173583172_173583596_173587034_173587194_173587695
ENSMUSG00000073489.7_173579242_173589259_1	chr1	-	1432	6	ISM	ENSMUSG00000073489.7	ENSMUST00000111214.4	2296	9	5226	4383	5226	-4383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAGCAAGGGGGACATT	NA	NA	NA	NA	NA	NA	NA	NA	173589259	173579241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173579611_173580275_173580465_173583172_173583596_173587034_173587194_173587695_173587893_173589164
ENSMUSG00000073489.7_173579479_173594485_1	chr1	-	1494	7	ISM	ENSMUSG00000073489.7	ENSMUST00000111214.4	2296	9	0	4620	0	-4620	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTACCGTGGCTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	173594485	173579478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173579611_173580275_173580465_173583172_173583596_173587034_173587194_173587695_173587893_173589164_173589450_173594376
ENSMUSG00000073557.13_134687606_134801761_1	chr1	-	2021	13	ISM	ENSMUSG00000073557.13	ENST00000608999.6	3630	23	81911	0	28485	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACCTAGGAACATCACTG	NA	NA	NA	NA	NA	NA	NA	NA	134801761	134687605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134688234_134699735_134699787_134701163_134701218_134704113_134704219_134705052_134705198_134762153_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134800544_134800671_134801676
ENSMUSG00000073557.13_134687707_134801761_1	chr1	-	1920	13	ISM	ENSMUSG00000073557.13	ENST00000608999.6	3630	23	81911	101	28485	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCTGGAGCTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	134801761	134687706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134688234_134699735_134699787_134701163_134701218_134704113_134704219_134705052_134705198_134762153_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134800544_134800671_134801676
ENSMUSG00000073557.13_134687835_134797919_1	chr1	-	1695	12	ISM	ENSMUSG00000073557.13	ENST00000391959.5	3813	24	85753	229	32327	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGCTTTGACCCATAAC	NA	NA	NA	NA	NA	NA	NA	NA	134797919	134687834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134688234_134699735_134699787_134701163_134701218_134704113_134704219_134705052_134705198_134762153_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134797805
ENSMUSG00000073557.13_134687835_134807401_1	chr1	-	2026	15	ISM	ENSMUSG00000073557.13	ENST00000608999.6	3630	23	76271	229	22845	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGCTTTGACCCATAAC	NA	NA	NA	NA	NA	NA	NA	NA	134807401	134687834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134688234_134699735_134699787_134701163_134701218_134704113_134704219_134705052_134705198_134762153_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134800544_134800671_134801676_134801760_134803702_134803904_134807366
ENSMUSG00000073557.13_134688035_134814207_1	chr1	-	1955	16	ISM	ENSMUSG00000073557.13	ENST00000608999.6	3630	23	69465	429	16039	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCGTCAGTCACCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	134814207	134688034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134688234_134699735_134699787_134701163_134701218_134704113_134704219_134705052_134705198_134762153_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134800544_134800671_134801676_134801760_134803702_134803904_134807366_134807484_134814160
ENSMUSG00000073557.13_134688091_134814252_1	chr1	-	1944	16	ISM	ENSMUSG00000073557.13	ENST00000608999.6	3630	23	69420	485	15994	-256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGCCTTCTGGCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	134814252	134688090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134688234_134699735_134699787_134701163_134701218_134704113_134704219_134705052_134705198_134762153_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134800544_134800671_134801676_134801760_134803702_134803904_134807366_134807484_134814160
ENSMUSG00000073557.13_134688208_134815067_1	chr1	-	1930	17	ISM	ENSMUSG00000073557.13	ENST00000608999.6	3630	23	68605	602	15179	-373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAGGCTGAAAGATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	134815067	134688207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134688234_134699735_134699787_134701163_134701218_134704113_134704219_134705052_134705198_134762153_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134800544_134800671_134801676_134801760_134803702_134803904_134807366_134807484_134814160_134814301_134815012
ENSMUSG00000073557.13_134701163_134803903_1	chr1	-	1725	13	ISM	ENSMUSG00000073557.13	ENST00000391959.5	3813	24	79769	13557	26343	-7482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTCGTCTGTTCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	134803903	134701162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134701218_134704113_134704219_134705052_134705198_134762153_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134797805_134797989_134800544_134800671_134801676_134801760_134803702
ENSMUSG00000073557.13_134704149_134819980_1	chr1	-	1949	16	ISM	ENSMUSG00000073557.13	ENST00000608999.6	3630	23	63692	16543	10266	-10468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGATATAAAAGCCAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	134819980	134704148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134704219_134705052_134705198_134762153_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134800544_134800671_134801676_134801760_134803702_134803904_134807366_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895
ENSMUSG00000073557.13_134704184_134807412_1	chr1	-	1646	13	ISM	ENSMUSG00000073557.13	ENST00000391959.5	3813	24	76260	16578	22834	-10503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACAAAGCTTCAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	134807412	134704183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134704219_134705052_134705198_134762153_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134797805_134797989_134800544_134800671_134801676_134801760_134803702_134803904_134807366
ENSMUSG00000073557.13_134705112_134814228_1	chr1	-	1691	13	ISM	ENSMUSG00000073557.13	ENST00000391959.5	3813	24	69444	17506	16018	-11431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTCTAGCCAGCCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	134814228	134705111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134705198_134762153_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134797805_134797989_134800544_134800671_134801676_134801760_134803702_134803904_134807366_134807484_134814160
ENSMUSG00000073557.13_134705125_134821149_1	chr1	-	1929	16	ISM	ENSMUSG00000073557.13	ENST00000608999.6	3630	23	62523	17519	9097	-11444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCAGGGAGGCTCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	134821149	134705124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134705198_134762153_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134800544_134800671_134801676_134801760_134803702_134803904_134807366_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087
ENSMUSG00000073557.13_134705178_134821209_1	chr1	-	1936	16	ISM	ENSMUSG00000073557.13	ENST00000608999.6	3630	23	62463	17572	9037	-11497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCGACCAGCAGCGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	134821209	134705177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134705198_134762153_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134800544_134800671_134801676_134801760_134803702_134803904_134807366_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087
ENSMUSG00000073557.13_134762179_134821247_1	chr1	-	1925	15	ISM	ENSMUSG00000073557.13	ENSMUST00000086444.6	3137	24	62431	68498	8999	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGGTAAGTGACCGACC	NA	NA	NA	NA	NA	NA	NA	NA	134821247	134762178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134800544_134800671_134801676_134801760_134803702_134803904_134807370_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087
ENSMUSG00000073557.13_134762179_134830249_1	chr1	-	1655	13	FSM	ENSMUSG00000073557.13	ENST00000367272.4	1652	13	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGGTAAGTGACCGACC	NA	NA	NA	NA	NA	NA	NA	NA	134830249	134762178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115
ENSMUSG00000073557.13_134763522_134824199_1	chr1	-	2009	15	ISM	ENSMUSG00000073557.13	ENSMUST00000086444.6	3137	24	59479	69841	6047	-1343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTACAGTGGTCTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	134824199	134763521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134800544_134800671_134801676_134801760_134803702_134803904_134807370_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080
ENSMUSG00000073557.13_134763716_134830246_1	chr1	-	2026	15	ISM	ENSMUSG00000073557.13	ENSMUST00000086444.6	3137	24	53432	70035	0	-1537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTACAGCTTCAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	134830246	134763715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134800544_134800671_134801676_134801760_134803702_134803904_134807370_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115
ENSMUSG00000073557.13_134763746_134819935_1	chr1	-	1668	13	ISM	ENSMUSG00000073557.13	ENST00000391959.5	3813	24	63737	76140	10311	-1567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACAGCGGCAAAGGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	134819935	134763745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134797805_134797989_134800544_134800671_134801676_134801760_134803702_134803904_134807366_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895
ENSMUSG00000073557.13_134763807_134819981_1	chr1	-	1653	13	ISM	ENSMUSG00000073557.13	ENST00000391959.5	3813	24	63691	76201	10265	-1628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTGCGCACAAGCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	134819981	134763806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134797805_134797989_134800544_134800671_134801676_134801760_134803702_134803904_134807366_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895
ENSMUSG00000073557.13_134763882_134883297_1	chr1	-	1928	16	ISM	ENSMUSG00000073557.13	ENSMUST00000086444.6	3137	24	381	70201	292	-1703	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACTCAACCAGACAAACC	NA	NA	NA	NA	NA	NA	NA	NA	134883297	134763881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134800544_134800671_134801676_134801760_134803702_134803904_134807370_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115_134830247_134883229
ENSMUSG00000073557.13_134765591_134883400_1	chr1	-	2007	15	ISM	ENSMUSG00000073557.13	ENSMUST00000086444.6	3137	24	278	71910	189	-3412	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTCTTTTTGCTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	134883400	134765590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134765780_134770380_134770472_134793515_134793699_134800544_134800671_134801676_134801760_134803702_134803904_134807370_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115_134830247_134883229
ENSMUSG00000073557.13_134765639_134821168_1	chr1	-	1646	13	ISM	ENSMUSG00000073557.13	ENST00000391959.5	3813	24	62504	78033	9078	-3460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCCCCAACAAAGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	134821168	134765638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134765780_134770380_134770472_134793515_134793699_134797805_134797989_134800544_134800671_134801676_134801760_134803702_134803904_134807366_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087
ENSMUSG00000073557.13_134770380_134883589_1	chr1	-	2008	14	ISM	ENSMUSG00000073557.13	ENSMUST00000086444.6	3137	24	89	76699	0	-8201	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCATGCCCCCCACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	134883589	134770379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134770472_134793515_134793699_134800544_134800671_134801676_134801760_134803702_134803904_134807370_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115_134830247_134883229
ENSMUSG00000073557.13_134770380_134883595_1	chr1	-	2014	14	ISM	ENSMUSG00000073557.13	ENSMUST00000086444.6	3137	24	83	76699	-6	-8201	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCATGCCCCCCACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	134883595	134770379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134770472_134793515_134793699_134800544_134800671_134801676_134801760_134803702_134803904_134807370_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115_134830247_134883229
ENSMUSG00000073557.13_134793514_134830249_1	chr1	-	1748	13	ISM	ENSMUSG00000073557.13	ENST00000391959.5	3813	24	53423	105908	-3	10083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGTTGCTGGTGCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	134830249	134793513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134793699_134797805_134797989_134800544_134800671_134801676_134801760_134803702_134803904_134807366_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115
ENSMUSG00000073557.13_134797805_134883400_1	chr1	-	1732	13	ISM	ENSMUSG00000073557.13	ENST00000391959.5	3813	24	272	110199	189	5792	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTCTTGGAGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	134883400	134797804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134797989_134800544_134800671_134801676_134801760_134803702_134803904_134807366_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115_134830247_134883229
ENSMUSG00000073557.13_134803597_134883400_1	chr1	-	1332	9	FSM	ENSMUSG00000073557.13	ENST00000356764.6	1575	9	243	0	189	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGTACAGACTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	134883400	134803596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_134803904_134814156_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115_134830247_134883229
ENSMUSG00000073557.13_134803597_134883666_1	chr1	-	1707	10	ISM	ENSMUSG00000073557.13	ENSMUST00000086444.6	3137	24	12	109916	6	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGTACAGACTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	134883666	134803596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_134803904_134807370_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115_134830247_134883229
ENSMUSG00000073563.4_54063186_54086835_1	chr18	+	1093	7	ISM	ENSMUSG00000073563.4	ENSMUST00000237880.2	2180	13	67926	-290	34367	290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGGCATCTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	54063185	54086835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54069924_54070021_54081119_54081227_54086316
ENSMUSG00000073563.4_54065316_54087011_1	chr18	+	1090	5	ISM	ENSMUSG00000073563.4	ENST00000361991.6	2226	12	36497	212	36497	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGGCTTCTGTGGCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	54065315	54087011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_54065412_54066521_54066618_54069924_54070021_54081119_54081227_54086316
ENSMUSG00000073616.11_92564867_92569648_1	chr1	-	372	3	NNC	ENSMUSG00000073616.11	novel	438	3	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGCTTTTAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	92569648	92564866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_92565126_92567408_92567475_92569601
ENSMUSG00000073616.11_92564867_92569648_2	chr1	-	377	3	NNC	ENSMUSG00000073616.11	novel	438	3	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGCTTTTAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	92569648	92564866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_92565126_92567408_92567475_92569596
ENSMUSG00000073616.11_92564867_92569707_1	chr1	-	429	3	NNC	ENSMUSG00000073616.11	novel	438	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGCTTTTAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	92569707	92564866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_92565117_92567408_92567482_92569601
ENSMUSG00000073633.10_84817574_84874335_1	chr1	+	350	3	ISM	ENSMUSG00000073633.10	ENSMUST00000097672.4	901	4	12	3873	12	-3873	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAAGATATTGCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	84817573	84874335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_84817690_84858812_84858922_84874210
ENSMUSG00000073633.10_84858810_84877739_1	chr1	+	307	3	ISM	ENSMUSG00000073633.10	ENSMUST00000097672.4	901	4	41248	469	41248	-469	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAACAGATAGTCCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	84858809	84877739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_84858922_84874210_84874384_84877717
ENSMUSG00000073633.10_84858900_84877868_1	chr1	+	346	3	ISM	ENSMUSG00000073633.10	ENSMUST00000097672.4	901	4	41338	340	41338	-340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAAAGACAGGAAAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	84858899	84877868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_84858922_84874210_84874384_84877717
ENSMUSG00000073633.10_84874256_84877897_1	chr1	+	308	2	ISM	ENSMUSG00000073633.10	ENSMUST00000097672.4	901	4	56694	311	56694	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTAGGGGATGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	84874255	84877897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_84874384_84877717
ENSMUSG00000073639.7_6765203_6789952_1	chr18	+	1980	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	58	4477	-10	712	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTTACTGGGTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	6765202	6789952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ENSMUSG00000073639.7_6765220_6790007_1	chr18	+	2018	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	75	4422	0	767	multi-exon	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGAAACCTCACATTACA	NA	NA	NA	NA	NA	NA	NA	NA	6765219	6790007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ENSMUSG00000073639.7_6765220_6790085_1	chr18	+	2096	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	75	4344	0	845	multi-exon	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAATGTAAGACTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	6765219	6790085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ENSMUSG00000073639.7_6783175_6790321_1	chr18	+	2046	4	ISM	ENSMUSG00000073639.7_ENSMUSG00000117461.2	ENSMUST00000234626.2	729	7	17962	-1628	-5593	1081	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTGTGTCTAGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	6783174	6790321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_6783193_6784569_6784689_6784938_6785006_6788479
ENSMUSG00000073643.12_79682268_79683995_1	chr1	-	1055	2	ISM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	55491	2289	55491	-2289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGGCCCATTGCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79683995	79682267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_79683288_79683960
ENSMUSG00000073643.12_79682383_79685237_1	chr1	-	1083	3	ISM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	54249	2404	54249	-2404	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAGACCAAGCCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	79685237	79682382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_79683288_79683960_79684070_79685168
ENSMUSG00000073643.12_79682813_79694940_1	chr1	-	1071	7	ISM	ENSMUSG00000073643.12	ENSMUST00000113513.8	4551	12	44546	2834	44546	-2834	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGGGAGAGCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	79694940	79682812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79694919
ENSMUSG00000073643.12_79682966_79696876_1	chr1	-	1046	8	ISM	ENSMUSG00000073643.12	ENSMUST00000113513.8	4551	12	42610	2987	42610	-2987	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAGGAGGGAACAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	79696876	79682965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79694919_79695033_79696840
ENSMUSG00000073643.12_79683074_79699985_1	chr1	-	1108	9	ISM	ENSMUSG00000073643.12	ENSMUST00000113513.8	4551	12	39501	3095	39501	-3095	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTTTGGGGGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	79699985	79683073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79694919_79695033_79696840_79696992_79699930
ENSMUSG00000073643.12_79683183_79711565_1	chr1	-	1048	10	ISM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	27921	3204	27921	-3204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGAATGGAGACCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	79711565	79683182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516
ENSMUSG00000073643.12_79684029_79739438_1	chr1	-	1126	11	ISM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	48	4050	48	-4050	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCATATGTCCATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	79739438	79684028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ENSMUSG00000073664.12_60220644_60261448_1	chr1	+	1126	8	ISM	ENSMUSG00000073664.12	ENST00000683969.1	8481	56	895	108707	886	-108707	internal_fragment	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGATCACTCAGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	60220643	60261448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_60220914_60233662_60233755_60234173_60234336_60239263_60239346_60240022_60240151_60245492_60245576_60256354_60256441_60261225
ENSMUSG00000073664.12_60240057_60274341_1	chr1	+	1149	9	ISM	ENSMUSG00000073664.12	ENST00000683969.1	8481	56	20308	95814	20299	-95814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCTTGAATCCCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	60240056	60274341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_60240151_60245492_60245576_60256354_60256441_60261225_60261533_60263783_60263891_60267780_60267868_60269760_60269845_60273955_60274055_60274139
ENSMUSG00000073664.12_60277757_60292650_1	chr1	+	1160	8	ISM	ENSMUSG00000073664.12	ENST00000683969.1	8481	56	58008	77505	57999	-77505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAATGAAGAAGAACAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	60277756	60292650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_60278035_60281697_60281784_60283952_60284043_60286774_60286944_60287521_60287656_60290193_60290354_60290462_60290566_60292510
ENSMUSG00000073664.12_60290479_60299865_1	chr1	+	1117	6	NIC	ENSMUSG00000073664.12	novel	15731	55	NA	NA	70721	-70290	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTCTTTGCAGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	60290478	60299865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_60290566_60292510_60292668_60294052_60294212_60296588_60296749_60297808_60297898_60299400
ENSMUSG00000073664.12_60292578_60300655_1	chr1	+	1137	6	NIC	ENSMUSG00000073664.12	novel	15731	55	NA	NA	72820	-69500	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATTGAAAGAGGACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	60292577	60300655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_60292668_60294052_60294212_60296588_60296749_60297808_60297898_60299400_60299953_60300568
ENSMUSG00000073676.5_55127473_55130280_1	chr1	+	406	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	182	186	182	-186	multi-exon	FALSE	canonical	NA	NA	NA	NA	1122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTGTTGAAATGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	55127472	55130280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
ENSMUSG00000073678.5_54533818_54582282_1	chr1	-	1437	17	ISM	ENSMUSG00000073678.5	ENST00000409475.5	2040	20	14462	35	8009	-35	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTCAGTAGTGAAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	54582282	54533817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54534051_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196
ENSMUSG00000073678.5_54533839_54582290_1	chr1	-	1421	17	NNC	ENSMUSG00000073678.5	novel	2040	20	NA	NA	8001	-56	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAAGGCCCAATATGTC	NA	NA	NA	NA	NA	NA	NA	NA	54582290	54533838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_54534051_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572580_54572631_54575113_54575272_54582196
ENSMUSG00000073678.5_54533854_54582313_1	chr1	-	1427	17	NNC	ENSMUSG00000073678.5	novel	2040	20	NA	NA	7978	-71	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTTTCTTTTAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	54582313	54533853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_54534051_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560455_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196
ENSMUSG00000073678.5_54533928_54587123_1	chr1	-	1439	18	ISM	ENSMUSG00000073678.5	ENST00000409475.5	2040	20	9621	145	3168	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATAATTATGTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	54587123	54533927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54534051_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097
ENSMUSG00000073678.5_54533990_54587168_1	chr1	-	1422	18	ISM	ENSMUSG00000073678.5	ENST00000409475.5	2040	20	9576	207	3123	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTAATTATGATTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	54587168	54533989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54534051_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097
ENSMUSG00000073678.5_54534029_54587250_1	chr1	-	1465	18	ISM	ENSMUSG00000073678.5	ENST00000409475.5	2040	20	9494	246	3041	-246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATTGGATAAAGAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	54587250	54534028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54534051_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097
ENSMUSG00000073678.5_54550607_54590194_1	chr1	-	1432	17	ISM	ENSMUSG00000073678.5	ENST00000409475.5	2040	20	6550	16824	97	12897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCCATGTGGCACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	54590194	54550606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135
ENSMUSG00000073678.5_54551765_54596661_1	chr1	-	1465	16	ISM	ENSMUSG00000073678.5	ENST00000409475.5	2040	20	83	17982	83	11739	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCAAAGGTAAGGGCATA	NA	NA	NA	NA	NA	NA	NA	NA	54596661	54551764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ENSMUSG00000073678.5_54551931_54596786_1	chr1	-	1547	15	ISM	ENSMUSG00000073678.5	ENST00000409475.5	2040	20	-42	18148	-42	11573	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1823	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCCTCATGTGTAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	54596786	54551930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ENSMUSG00000073678.5_54564527_54582370_1	chr1	-	686	7	NNC	ENSMUSG00000073678.5	novel	1042	10	NA	NA	7921	-1023	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	884	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTTTTTGAACTGATT	NA	NA	NA	NA	NA	NA	NA	NA	54582370	54564526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_54564574_54567670_54567755_54570012_54570119_54571180_54571248_54572580_54572631_54575113_54575272_54582196
ENSMUSG00000073678.5_54567714_54587133_1	chr1	-	633	7	ISM	ENSMUSG00000073678.5	ENST00000409188.5	1042	10	3158	4210	3158	-4210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAAATCTACACTCATG	NA	NA	NA	NA	NA	NA	NA	NA	54587133	54567713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54567755_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097
ENSMUSG00000073678.5_54570012_54587273_1	chr1	-	733	6	ISM	ENSMUSG00000073678.5	ENST00000409188.5	1042	10	3018	6508	3018	-6508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGGTAATAACCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	54587273	54570011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097
ENSMUSG00000073678.5_54571206_54590206_1	chr1	-	672	6	ISM	ENSMUSG00000073678.5	ENST00000409188.5	1042	10	85	7702	85	-7702	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATTGATGCCGATACCA	NA	NA	NA	NA	NA	NA	NA	NA	54590206	54571205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135
ENSMUSG00000073684.14_155334423_155340840_1	chr4	+	772	4	FSM	ENSMUSG00000073684.14	ENSMUST00000178473.8	1076	4	0	304	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTCAGCCTGACAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	155334422	155340840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155334520_155334962_155335108_155335212_155335494_155340591
ENSMUSG00000073684.14_155334423_155341015_1	chr4	+	1390	3	FSM	ENSMUSG00000073684.14	ENSMUST00000097747.9	1479	3	-37	126	0	-126	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGATGTGATGAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	155334422	155341015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155335108_155335212_155335494_155340591
ENSMUSG00000073702.12_39406923_39410992_1	chr1	+	1041	5	NNC	ENSMUSG00000073702.12	novel	1049	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5066	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGGTTTGAACATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	39406922	39410992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410390
ENSMUSG00000073702.12_39407010_39410088_1	chr1	+	365	4	ISM	ENSMUSG00000073702.12	ENSMUST00000178079.8	487	5	0	357	0	-357	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTCCCCAAACAAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	39407009	39410088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_39407088_39407229_39407337_39409094_39409221_39410034
ENSMUSG00000073705.11_149212655_149216129_1	chr4	-	832	3	ISM	ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	5957	0	5897	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGTCTGCTTGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	149216129	149212654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149213386_149214609_149214677_149216095
ENSMUSG00000073705.11_149212802_149216839_1	chr4	-	809	4	ISM	ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	5247	147	5187	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTGTGGCTTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	149216839	149212801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715
ENSMUSG00000073705.11_149212997_149222086_1	chr4	-	768	5	FSM	ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	0	342	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCAATCAGCTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	149222086	149212996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
ENSMUSG00000073725.9_24626487_24801805_1	chr1	+	1710	16	FSM	ENSMUSG00000073725.9	ENST00000649028.1	2005	16	75	220	75	-220	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGCGTGAACGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	24626486	24801805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_24626655_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073725.9_24626551_24801845_1	chr1	+	1686	16	FSM	ENSMUSG00000073725.9	ENST00000649028.1	2005	16	139	180	139	-180	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGCTGAATATCTATTA	NA	NA	NA	NA	NA	NA	NA	NA	24626550	24801845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_24626655_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073725.9_24626613_24801898_1	chr1	+	1677	16	FSM	ENSMUSG00000073725.9	ENST00000649028.1	2005	16	201	127	201	-127	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTCTAGCTTTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	24626612	24801898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_24626655_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073725.9_24717741_24803057_1	chr1	+	2951	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	30	1472	0	1032	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCCCACCAAAAATCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	24717740	24803057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073725.9_24717820_24803106_1	chr1	+	2921	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	109	1423	79	1081	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGGTTTTTTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	24717819	24803106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073725.9_24717820_24803169_1	chr1	+	2984	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	109	1360	79	1144	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTACCCTGTTAGAATATA	NA	NA	NA	NA	NA	NA	NA	NA	24717819	24803169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073725.9_24732020_24803359_1	chr1	+	2921	14	ISM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	14309	1170	14013	-1170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATTTAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	24732019	24803359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073725.9_24745075_24803558_1	chr1	+	2942	12	ISM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	27364	971	27068	-971	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGCTGTTGGATAATACA	NA	NA	NA	NA	NA	NA	NA	NA	24745074	24803558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073725.9_24750614_24803660_1	chr1	+	2972	11	ISM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	32903	869	32607	-869	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCACTACCTGTGCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	24750613	24803660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073725.9_24767723_24803893_1	chr1	+	2967	9	ISM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	50012	636	49716	-636	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCTGCATACTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	24767722	24803893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073725.9_24770923_24804004_1	chr1	+	2953	8	ISM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	53212	525	52916	-525	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTCTTGGCTGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24770922	24804004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073725.9_24783408_24804192_1	chr1	+	2947	6	ISM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	65697	337	65401	-337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTACATTGGTTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	24783407	24804192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073725.9_24783954_24804318_1	chr1	+	3034	5	ISM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	66243	211	65947	-211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATAGGATTTTTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	24783953	24804318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073725.9_24786016_24804529_1	chr1	+	3017	4	ISM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	68305	0	68009	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCGACTAATGAACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	24786015	24804529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073771.12_116977501_116978210_1	chr4	-	601	2	ISM	ENSMUSG00000073771.12	ENSMUST00000183310.2	1620	8	4605	129	4605	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTTGCCTACCTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	116978210	116977500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116978059_116978167
ENSMUSG00000073771.12_116977926_116981200_1	chr4	-	639	7	ISM	ENSMUSG00000073771.12	ENSMUST00000183310.2	1620	8	1615	554	1615	-554	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCACTTCCGGACCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	116981200	116977925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116978059_116978167_116978294_116978394_116978527_116978610_116978680_116979415_116979476_116980925_116980980_116981135
ENSMUSG00000073771.12_116978187_116981311_1	chr4	-	598	6	ISM	ENSMUSG00000073771.12	ENSMUST00000183310.2	1620	8	1504	815	1504	-815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGAACCGCTCATCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	116981311	116978186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116978294_116978394_116978527_116978610_116978680_116979415_116979476_116980925_116980980_116981135
ENSMUSG00000073771.12_116978510_116982687_1	chr4	-	564	6	ISM	ENSMUSG00000073771.12	ENSMUST00000183310.2	1620	8	128	1138	128	-1138	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTCTGGAGCTGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	116982687	116978509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_116978527_116978610_116978680_116979415_116979476_116980925_116980980_116981135_116981338_116982525
ENSMUSG00000073792.12_99607389_99632775_1	chr4	+	729	8	ISM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	3487	18922	3487	-18922	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTGGCTGCCGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	99607388	99632775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726
ENSMUSG00000073838.11_126086550_126088555_1	chr7	+	926	7	ISM	ENSMUSG00000073838.11	ENSMUST00000106392.10	1754	9	0	1348	0	-1344	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGATGAGTGTGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	126086549	126088555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126086663_126086759_126086955_126087431_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507
ENSMUSG00000073838.11_126086801_126088746_1	chr7	+	852	7	ISM	ENSMUSG00000073838.11	ENSMUST00000106392.10	1754	9	251	1157	251	-1153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGAGGGCTGAGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	126086800	126088746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126086955_126087431_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723
ENSMUSG00000073838.11_126086801_126088777_1	chr7	+	883	7	ISM	ENSMUSG00000073838.11	ENSMUST00000106392.10	1754	9	251	1126	251	-1122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTGGTCCGAGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	126086800	126088777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126086955_126087431_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723
ENSMUSG00000073838.11_126086910_126088833_1	chr7	+	830	7	ISM	ENSMUSG00000073838.11	ENSMUST00000106392.10	1754	9	360	1070	360	-1066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGGCTCCATCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	126086909	126088833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126086955_126087431_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723
ENSMUSG00000073838.11_126087496_126089044_1	chr7	+	844	7	ISM	ENSMUSG00000073838.11	ENSMUST00000098048.6	1679	10	963	855	946	-855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACATGGCCTGTCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	126087495	126089044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723_126088876_126088963
ENSMUSG00000073838.11_126087567_126089535_1	chr7	+	855	8	ISM	ENSMUSG00000073838.11	ENSMUST00000098048.6	1679	10	1034	364	1017	-364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGCAGCCCATGATCTTA	NA	NA	NA	NA	NA	NA	NA	NA	126087566	126089535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723_126088876_126088963_126089084_126089492
ENSMUSG00000073838.11_126087858_126089588_1	chr7	+	840	7	ISM	ENSMUSG00000073838.11	ENSMUST00000098048.6	1679	10	1325	311	1308	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGACCATTGGCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	126087857	126089588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723_126088876_126088963_126089084_126089492
ENSMUSG00000073838.11_126087858_126089644_1	chr7	+	896	7	ISM	ENSMUSG00000073838.11	ENSMUST00000098048.6	1679	10	1325	255	1308	-255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAACATCAAGTGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	126087857	126089644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723_126088876_126088963_126089084_126089492
ENSMUSG00000073838.11_126088290_126089903_1	chr7	+	923	5	ISM	ENSMUSG00000073838.11	ENSMUST00000098048.6	1679	10	1757	-4	1740	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	621	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTCTTGTGTCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	126088289	126089903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_126088425_126088507_126088613_126088723_126088876_126088963_126089084_126089492
ENSMUSG00000073889.11_41755628_41764772_1	chr4	+	604	7	NNC	ENSMUSG00000036073.18	novel	771	7	NA	NA	65	-106	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACAGACTGGTCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	41755627	41764772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_41755653_41755960_41756131_41756938_41757000_41757155_41757279_41763581_41763682_41763824_41763886_41764708
ENSMUSG00000073889.11_41755961_41764801_1	chr4	+	599	6	NNC	ENSMUSG00000036073.18	novel	771	7	NA	NA	398	-77	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCCTGATGAAGGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	41755960	41764801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_41756131_41756938_41756991_41757155_41757279_41763581_41763682_41763824_41763886_41764708
ENSMUSG00000073889.11_41755961_41764833_1	chr4	+	635	6	NNC	ENSMUSG00000036073.18	novel	771	7	NA	NA	398	-45	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGATGGTGTATCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	41755960	41764833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_41756131_41756938_41757000_41757155_41757279_41763586_41763682_41763824_41763886_41764708
ENSMUSG00000073889.11_41755961_41764854_1	chr4	+	650	6	NNC	ENSMUSG00000036073.18	novel	771	7	NA	NA	398	-24	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGTGACCCTGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	41755960	41764854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_41756131_41756938_41757000_41757166_41757279_41763581_41763682_41763824_41763886_41764708
ENSMUSG00000073889.11_41755961_41764855_1	chr4	+	662	6	NNC	ENSMUSG00000036073.18	novel	771	7	NA	NA	398	-23	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGACCCTGAAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	41755960	41764855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_41756131_41756938_41757000_41757155_41757279_41763581_41763682_41763824_41763886_41764708
ENSMUSG00000073889.11_41756937_41764878_1	chr4	+	514	5	NNC	ENSMUSG00000036073.18	novel	771	7	NA	NA	1374	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	461	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTAGTGGAAGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	41756936	41764878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_41757000_41757155_41757279_41763584_41763682_41763824_41763886_41764708
ENSMUSG00000073889.11_41760196_41768226_1	chr4	+	1492	11	ISM	ENSMUSG00000073889.11	ENSMUST00000098132.11	2009	13	0	1248	0	-1248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCCTGGCTGTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	41760195	41768226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_41760552_41763581_41763682_41763824_41763886_41764708_41764879_41765006_41765122_41765274_41765308_41765385_41765553_41766110_41766275_41767459_41767602_41767945_41768072_41768168
ENSMUSG00000073889.11_41760454_41769153_1	chr4	+	1430	13	FSM	ENSMUSG00000073889.11	ENSMUST00000098132.11	2009	13	258	321	0	-321	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGACAGGCAGAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	41760453	41769153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_41760552_41763581_41763682_41763824_41763886_41764708_41764879_41765006_41765122_41765274_41765308_41765385_41765553_41766110_41766275_41767459_41767602_41767945_41768072_41768168_41768266_41768492_41768576_41769079
ENSMUSG00000073889.11_41763626_41769263_1	chr4	+	1398	12	ISM	ENSMUSG00000073889.11	ENSMUST00000108042.3	1768	13	1317	211	1317	-211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTCTGGACTTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	41763625	41769263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_41763682_41763824_41763886_41764708_41764879_41765006_41765122_41765274_41765308_41765385_41765553_41766110_41766275_41767459_41767602_41767945_41768072_41768168_41768266_41768492_41768576_41769079
ENSMUSG00000073889.11_41764716_41769474_1	chr4	+	1485	10	ISM	ENSMUSG00000073889.11	ENSMUST00000108042.3	1768	13	2407	0	2407	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCGTCTAATGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	41764715	41769474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_41764879_41765006_41765122_41765274_41765308_41765385_41765553_41766110_41766275_41767459_41767602_41767945_41768072_41768168_41768266_41768492_41768576_41769079
ENSMUSG00000073889.11_41764763_41769474_1	chr4	+	1438	10	ISM	ENSMUSG00000073889.11	ENSMUST00000108042.3	1768	13	2454	0	2454	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCGTCTAATGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	41764762	41769474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_41764879_41765006_41765122_41765274_41765308_41765385_41765553_41766110_41766275_41767459_41767602_41767945_41768072_41768168_41768266_41768492_41768576_41769079
ENSMUSG00000073889.11_41764849_41769474_1	chr4	+	1352	10	ISM	ENSMUSG00000073889.11	ENSMUST00000108042.3	1768	13	2540	0	2540	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCGTCTAATGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	41764848	41769474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_41764879_41765006_41765122_41765274_41765308_41765385_41765553_41766110_41766275_41767459_41767602_41767945_41768072_41768168_41768266_41768492_41768576_41769079
ENSMUSG00000073982.12_101889056_101899309_1	chr7	-	522	2	FSM	ENSMUSG00000073982.12	ENSMUST00000098230.11	1269	2	21	726	-14	-726	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAAGCGCCCATCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	101899309	101889055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_101889520_101899251
ENSMUSG00000073987.5_20042052_20065902_1	chr4	+	1117	9	FSM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	0	848	0	-848	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTGAATTGCTAACACAG	NA	NA	NA	NA	NA	NA	NA	NA	20042051	20065902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_20042283_20046202_20046315_20049791_20049843_20052663_20052749_20054063_20054203_20057936_20058044_20058138_20058230_20063998_20064137_20065739
ENSMUSG00000073987.5_20046232_20066078_1	chr4	+	1033	8	ISM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	4180	672	4180	-672	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGATTCTAAAATACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	20046231	20066078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_20046315_20049791_20049843_20052663_20052749_20054063_20054203_20057936_20058044_20058138_20058230_20063998_20064137_20065739
ENSMUSG00000073987.5_20049818_20066267_1	chr4	+	1113	7	ISM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	7766	483	7766	-483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAATGTTTTTCTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	20049817	20066267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_20049843_20052663_20052749_20054063_20054203_20057936_20058044_20058138_20058230_20063998_20064137_20065739
ENSMUSG00000073987.5_20052671_20066242_1	chr4	+	1056	6	ISM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	10619	508	10619	-508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTGTGTTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	20052670	20066242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_20052749_20054063_20054203_20057936_20058044_20058138_20058230_20063998_20064137_20065739
ENSMUSG00000073987.5_20057935_20066493_1	chr4	+	1092	4	ISM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	15883	257	15883	-257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAAAAGTCTGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	20057934	20066493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_20058044_20058138_20058230_20063998_20064137_20065739
ENSMUSG00000073987.5_20064063_20066750_1	chr4	+	1085	2	ISM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	22011	0	22011	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACTGTTTTTGAAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	20064062	20066750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_20064137_20065739
ENSMUSG00000074028.5_119022648_119038051_1	chr9	-	1470	9	NNC	ENSMUSG00000074028.5	novel	1562	9	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGCAGGGTAATCACAG	NA	NA	NA	NA	NA	NA	NA	NA	119038051	119022647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_119022854_119023484_119023594_119023776_119023992_119024210_119024306_119024390_119024512_119024669_119024839_119025037_119025193_119025431_119025529_119037748
ENSMUSG00000074028.5_119022648_119038051_2	chr9	-	1473	9	NNC	ENSMUSG00000074028.5	novel	1562	9	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGCAGGGTAATCACAG	NA	NA	NA	NA	NA	NA	NA	NA	119038051	119022647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_119022846_119023484_119023594_119023776_119023992_119024210_119024306_119024390_119024512_119024669_119024839_119025033_119025193_119025424_119025529_119037748
ENSMUSG00000074028.5_119022648_119038051_3	chr9	-	1477	9	ISM	ENSMUSG00000074028.5	ENSMUST00000084797.6	2001	10	113	608	81	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGCAGGGTAATCACAG	NA	NA	NA	NA	NA	NA	NA	NA	119038051	119022647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119022854_119023484_119023594_119023776_119023992_119024210_119024306_119024390_119024512_119024669_119024839_119025037_119025193_119025424_119025529_119037748
ENSMUSG00000074028.5_119022648_119038051_4	chr9	-	1473	9	NNC	ENSMUSG00000074028.5	novel	1562	9	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGCAGGGTAATCACAG	NA	NA	NA	NA	NA	NA	NA	NA	119038051	119022647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_119022854_119023484_119023594_119023776_119023992_119024210_119024306_119024390_119024512_119024669_119024831_119025033_119025193_119025424_119025529_119037748
ENSMUSG00000074028.5_119022648_119038051_5	chr9	-	1476	9	NNC	ENSMUSG00000074028.5	novel	1562	9	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGCAGGGTAATCACAG	NA	NA	NA	NA	NA	NA	NA	NA	119038051	119022647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_119022854_119023484_119023594_119023776_119023992_119024215_119024306_119024390_119024512_119024669_119024839_119025033_119025193_119025424_119025529_119037748
ENSMUSG00000074028.5_119022648_119038164_1	chr9	-	1590	9	ISM	ENSMUSG00000074028.5	ENSMUST00000084797.6	2001	10	0	608	0	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGCAGGGTAATCACAG	NA	NA	NA	NA	NA	NA	NA	NA	119038164	119022647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_119022854_119023484_119023594_119023776_119023992_119024210_119024306_119024390_119024512_119024669_119024839_119025037_119025193_119025424_119025529_119037748
ENSMUSG00000074028.5_119022648_119038164_2	chr9	-	1589	9	NNC	ENSMUSG00000074028.5	novel	1562	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	895	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGCAGGGTAATCACAG	NA	NA	NA	NA	NA	NA	NA	NA	119038164	119022647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_119022854_119023484_119023594_119023776_119023992_119024215_119024306_119024390_119024512_119024669_119024839_119025033_119025193_119025424_119025529_119037748
ENSMUSG00000074063.11_120163901_120172720_1	chr8	+	1686	6	FSM	ENSMUSG00000074063.11	ENSMUST00000152420.8	2005	6	44	275	0	-275	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGATTTCCCATTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	120163900	120172720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_120164033_120168133_120168242_120169171_120169309_120169654_120169847_120169930_120170023_120171695
ENSMUSG00000074063.11_120163928_120172774_1	chr8	+	1713	6	FSM	ENSMUSG00000074063.11	ENSMUST00000152420.8	2005	6	71	221	27	-221	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGGATGGACTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	120163927	120172774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_120164033_120168133_120168242_120169171_120169309_120169654_120169847_120169930_120170023_120171695
ENSMUSG00000074063.11_120169171_120172995_1	chr8	+	1722	4	ISM	ENSMUSG00000074063.11	ENSMUST00000152420.8	2005	6	5314	0	5270	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCCTGAGGAGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	120169170	120172995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120169309_120169654_120169847_120169930_120170023_120171695
ENSMUSG00000074064.7_120121957_120128238_1	chr8	+	272	2	ISM	ENSMUSG00000074064.7	ENSMUST00000098367.5	2128	5	340	9603	340	-9603	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATGCTGTCTGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	120121956	120128238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_120122210_120128219
ENSMUSG00000074088.7_130253987_130283663_1	chr4	+	1366	10	FSM	ENSMUSG00000074088.7	ENSMUST00000105994.4	1584	10	62	156	62	-156	multi-exon	FALSE	canonical	NA	NA	NA	NA	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTAGGCTGGAGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	130253986	130283663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
ENSMUSG00000074088.7_130256420_130283826_1	chr4	+	1374	9	ISM	ENSMUSG00000074088.7	ENSMUST00000105994.4	1584	10	2495	-7	2495	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGACTTGGATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	130256419	130283826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_130256551_130258867_130258962_130261981_130262148_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
ENSMUSG00000074129.15_44774982_44778185_1	chr7	-	1040	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATGTGTGCTGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	44778185	44774981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776421_44776517_44776632_44776699_44776919_44776993_44778123
ENSMUSG00000074129.15_44774982_44778185_2	chr7	-	1042	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATGTGTGCTGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	44778185	44774981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776512_44776632_44776699_44776919_44776993_44778123
ENSMUSG00000074129.15_44774982_44778185_3	chr7	-	1039	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATGTGTGCTGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	44778185	44774981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776691_44776919_44776993_44778123
ENSMUSG00000074129.15_44774982_44778185_4	chr7	-	1041	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATGTGTGCTGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	44778185	44774981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44775457_44775538_44775662_44775901_44775956_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ENSMUSG00000074129.15_44775323_44778185_1	chr7	-	630	7	FSM	ENSMUSG00000074129.15	ENST00000621674.4	661	7	29	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCCGCCAACTAGGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	44778185	44775322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776929_44776993_44778123
ENSMUSG00000074170.6_37918312_37927440_1	chr7	-	3347	2	FSM	ENSMUSG00000074170.6	ENSMUST00000098513.6	5263	2	0	1916	0	-1916	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGTCTATCAAAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	37927440	37918311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_37921583_37927364
ENSMUSG00000074182.9_145281960_145301956_1	chr3	+	826	9	ISM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	0	7912	0	-4363	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAATTGCTTCCGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	145281959	145301956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878
ENSMUSG00000074182.9_145282234_145284088_1	chr3	+	666	3	ISM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	274	25780	-242	-22231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTGAGATGAATCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	145282233	145284088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_145282752_145283856_145283923_145284006
ENSMUSG00000074182.9_145282434_145288391_1	chr3	+	685	5	ISM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	474	21477	-42	-17928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCACTTTTACTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	145282433	145288391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283
ENSMUSG00000074182.9_145282507_145306320_1	chr3	+	899	10	FSM	ENSMUSG00000074182.9	ENST00000431532.6	929	10	31	-1	31	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTACTTCAAGGTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	145282506	145306320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_145282522_145282566_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212
ENSMUSG00000074182.9_145282605_145306320_1	chr3	+	846	9	ISM	ENSMUSG00000074182.9	ENST00000431532.6	929	10	129	-1	129	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTACTTCAAGGTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	145282604	145306320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212
ENSMUSG00000074182.9_145283855_145309767_1	chr3	+	793	9	ISM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	1895	101	1379	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTGTGTGTTACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	145283854	145309767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ENSMUSG00000074182.9_145284004_145309873_1	chr3	+	834	8	ISM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	2044	-5	1528	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATGTTACTGCCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	145284003	145309873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ENSMUSG00000074182.9_145298589_145310001_1	chr3	+	644	5	ISM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	16629	-133	16113	133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTTATTTGTTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	145298588	145310001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ENSMUSG00000074182.9_145306288_145310286_1	chr3	+	644	2	ISM	ENSMUSG00000074182.9	ENSMUST00000098534.9	2339	10	24301	264	23812	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGGCAGGAAGGAATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	145306287	145310286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_145306335_145309689
ENSMUSG00000074217.9_84736851_84738262_1	chr8	-	826	3	FSM	ENSMUSG00000074217.9	ENSMUST00000190457.2	1351	3	525	0	525	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTGCAAGCTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	84738262	84736850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_84737122_84737339_84737402_84737769
ENSMUSG00000074217.9_84737396_84738662_1	chr8	-	899	2	ISM	ENSMUSG00000074217.9	ENSMUST00000190457.2	1351	3	125	545	125	-545	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAGATGGAAAATTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	84738662	84737395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_84737402_84737769
ENSMUSG00000074220.11_29825221_29833191_1	chr7	+	798	4	FSM	ENSMUSG00000074220.11	ENST00000292928.7	1728	4	17	913	17	-913	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGACCTTGGTATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	29825220	29833191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_29825267_29830097_29830253_29830956_29831050_29832687
ENSMUSG00000074220.11_29831007_29833378_1	chr7	+	734	2	ISM	ENSMUSG00000074220.11	ENST00000292928.7	1728	4	5803	726	5803	-726	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCGGATCCACACAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	29831006	29833378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_29831050_29832687
ENSMUSG00000074238.7_127601628_127605952_1	chr3	-	863	2	ISM	ENSMUSG00000074238.7	ENSMUST00000051737.8	2662	10	25208	967	25208	-967	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATCCTAAGTCCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	127605952	127601627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127602403_127605864
ENSMUSG00000074238.7_127601941_127610655_1	chr3	-	917	6	ISM	ENSMUSG00000074238.7	ENSMUST00000051737.8	2662	10	20505	1280	20505	-1280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCTGACATATCACACA	NA	NA	NA	NA	NA	NA	NA	NA	127610655	127601940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558
ENSMUSG00000074240.6_72959490_72961038_1	chr8	-	181	2	ISM	ENSMUSG00000074240.6	ENSMUST00000098630.5	585	5	5625	1268	5625	-1237	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAAGCAGATGGAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	72961038	72959489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_72959603_72960970
ENSMUSG00000074247.11_71921855_71927357_1	chr8	+	541	5	NNC	ENSMUSG00000074247.11	novel	1933	5	NA	NA	6	-1385	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCCTTGAGTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	71921854	71927357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_71921970_71924680_71924762_71924838_71924891_71926418_71926486_71927131
ENSMUSG00000074247.11_71921855_71928616_1	chr8	+	1733	4	FSM	ENSMUSG00000074247.11	ENSMUST00000147642.2	1865	4	6	126	6	-126	multi-exon	FALSE	canonical	NA	NA	NA	NA	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACGGATCTGGCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	71921854	71928616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_71921970_71924680_71924762_71924838_71924891_71927131
ENSMUSG00000074247.11_71924680_71928742_1	chr8	+	1745	3	ISM	ENSMUSG00000074247.11	ENSMUST00000147642.2	1865	4	2831	0	2831	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTGTGTATTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	71924679	71928742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_71924762_71924838_71924891_71927131
ENSMUSG00000074358.10_18627195_18627926_1	chr7	-	229	3	ISM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	16414	2387	16414	-2387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTCACTCGCTCCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	18627926	18627194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_18627274_18627691_18627775_18627859
ENSMUSG00000074364.7_15683433_15686160_1	chr7	-	1455	2	ISM	ENSMUSG00000074364.7	ENSMUST00000098799.5	5119	6	15332	2550	15332	-2550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAGACACTCAGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	15686160	15683432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_15684718_15685990
ENSMUSG00000074364.7_15683804_15691758_1	chr7	-	1422	3	ISM	ENSMUSG00000074364.7	ENSMUST00000098799.5	5119	6	9734	2921	9734	-2921	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTATGTAGCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	15691758	15683803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_15684718_15685990_15686156_15691415
ENSMUSG00000074364.7_15684067_15697915_1	chr7	-	1411	5	ISM	ENSMUSG00000074364.7	ENSMUST00000098799.5	5119	6	3577	3184	3577	-3184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTCACCCTGCCTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	15697915	15684066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_15684718_15685990_15686156_15691415_15691829_15697304_15697403_15697831
ENSMUSG00000074364.7_15684141_15697999_1	chr7	-	1421	5	ISM	ENSMUSG00000074364.7	ENSMUST00000098799.5	5119	6	3493	3258	3493	-3258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCTTTGCCCTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	15697999	15684140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_15684718_15685990_15686156_15691415_15691829_15697304_15697403_15697831
ENSMUSG00000074364.7_15684203_15698056_1	chr7	-	1416	5	ISM	ENSMUSG00000074364.7	ENSMUST00000098799.5	5119	6	3436	3320	3436	-3320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTCTAAGCGACGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	15698056	15684202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_15684718_15685990_15686156_15691415_15691829_15697304_15697403_15697831
ENSMUSG00000074364.7_15684536_15701400_1	chr7	-	1374	6	FSM	ENSMUSG00000074364.7	ENSMUST00000098799.5	5119	6	92	3653	92	-3653	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTGGAGCGGGGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	15701400	15684535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_15684718_15685990_15686156_15691415_15691829_15697304_15697403_15697831_15698292_15701344
ENSMUSG00000074397.6_44338138_44346883_1	chr9	-	474	3	NNC	ENSMUSG00000074397.6	novel	495	3	NA	NA	63	6514	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2846	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	44346883	44338137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_44338194_44345066_44345321_44346719
ENSMUSG00000074406.6_4921801_4923709_1	chr7	+	1825	2	FSM	ENSMUSG00000074406.6	ENST00000391718.3	3042	2	30	1187	30	-1187	multi-exon	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCACCGGCTCTGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	4921800	4923709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_4921952_4922035
ENSMUSG00000074406.6_4921870_4923782_1	chr7	+	1829	2	FSM	ENSMUSG00000074406.6	ENST00000391718.3	3042	2	99	1114	99	-1114	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTCACGTACTCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	4921869	4923782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_4921952_4922035
ENSMUSG00000074406.6_4921922_4923838_1	chr7	+	1833	2	FSM	ENSMUSG00000074406.6	ENST00000391718.3	3042	2	151	1058	151	-1058	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGCCCAGCCTACGCCC	NA	NA	NA	NA	NA	NA	NA	NA	4921921	4923838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_4921952_4922035
ENSMUSG00000074415.15_41491274_41501651_1	chr9	+	1196	3	FSM	ENSMUSG00000074415.15	ENST00000530072.6	1197	3	1	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGCAGCCACCCACATG	NA	NA	NA	NA	NA	NA	NA	NA	41491273	41501651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_41491495_41491880_41492699_41501494
ENSMUSG00000074415.15_41491274_41501651_2	chr9	+	1195	3	NNC	ENSMUSG00000074415.15	novel	1197	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	2403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGCAGCCACCCACATG	NA	NA	NA	NA	NA	NA	NA	NA	41491273	41501651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_41491495_41491880_41492699_41501495
ENSMUSG00000074417.10_3896979_3900247_1	chr7	-	902	3	NNC	ENSMUSG00000074417.10	novel	936	4	NA	NA	175	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGGTCCTGACATGTC	NA	NA	NA	NA	NA	NA	NA	NA	3900247	3896978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_3897283_3897541_3897839_3899946
ENSMUSG00000074417.10_3896979_3900422_1	chr7	-	931	4	NNC	ENSMUSG00000074417.10	novel	936	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGGTCCTGACATGTC	NA	NA	NA	NA	NA	NA	NA	NA	3900422	3896978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_3897278_3897541_3897839_3899939_3900246_3900393
ENSMUSG00000074417.10_3896979_3900422_2	chr7	-	936	4	FSM	ENSMUSG00000074417.10	ENST00000396327.7	936	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGGTCCTGACATGTC	NA	NA	NA	NA	NA	NA	NA	NA	3900422	3896978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_3897283_3897541_3897839_3899939_3900246_3900393
ENSMUSG00000074417.10_3897048_3898770_1	chr7	-	1095	4	NNC	ENSMUSG00000074417.10	novel	1106	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	869	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTCAAGACTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	3898770	3897047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_3897283_3897541_3897857_3898099_3898375_3898500
ENSMUSG00000074417.10_3897048_3898770_2	chr7	-	1102	4	FSM	ENSMUSG00000074417.10	ENST00000245621.6	1106	4	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTCAAGACTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	3898770	3897047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_3897283_3897541_3897857_3898092_3898375_3898500
ENSMUSG00000074417.10_3897048_3898770_3	chr7	-	1097	4	NNC	ENSMUSG00000074417.10	novel	1106	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTCAAGACTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	3898770	3897047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_3897278_3897541_3897857_3898092_3898375_3898500
ENSMUSG00000074457.11_90444561_90450169_1	chr3	+	841	3	FSM	ENSMUSG00000074457.11	ENSMUST00000098911.10	1127	3	0	286	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGTGTGCTCTCGCAA	NA	NA	NA	NA	NA	NA	NA	NA	90444560	90450169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_90444725_90449300_90449480_90449671
ENSMUSG00000074457.11_90448456_90450042_1	chr3	+	658	4	NNC	ENSMUSG00000074457.11	novel	754	4	NA	NA	0	-13	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCACTGTGGTAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	90448455	90450042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_90448625_90449300_90449480_90449671_90449812_90449872
ENSMUSG00000074457.11_90448456_90450042_2	chr3	+	652	4	NNC	ENSMUSG00000074457.11	novel	754	4	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1088	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCACTGTGGTAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	90448455	90450042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_90448625_90449300_90449480_90449671_90449812_90449878
ENSMUSG00000074457.11_90448456_90450042_3	chr3	+	656	4	FSM	ENSMUSG00000074457.11	ENST00000368705.2	754	4	126	-28	0	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCACTGTGGTAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	90448455	90450042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_90448625_90449300_90449480_90449671_90449812_90449874
ENSMUSG00000074457.11_90448593_90450458_1	chr3	+	998	3	FSM	ENSMUSG00000074457.11	ENSMUST00000098910.3	1123	3	125	0	125	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTGCTTCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	90448592	90450458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_90448625_90449300_90449480_90449671
ENSMUSG00000074457.11_90449355_90450169_1	chr3	+	560	3	FSM	ENSMUSG00000074457.11	ENST00000368704.5	718	3	36	122	36	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGTGTGCTCTCGCAA	NA	NA	NA	NA	NA	NA	NA	NA	90449354	90450169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_90449480_90449671_90449812_90449874
ENSMUSG00000074457.11_90449355_90450321_1	chr3	+	775	2	ISM	ENSMUSG00000074457.11	ENST00000368704.5	718	3	36	-30	36	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAACCTCTTAGCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	90449354	90450321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90449480_90449671
ENSMUSG00000074476.7_21666738_21668690_1	chr9	-	1036	3	ISM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	2909	0	2888	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTGTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	21668690	21666737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21667592_21668412_21668490_21668585
ENSMUSG00000074476.7_21666738_21669008_1	chr9	-	1064	4	NNC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	2570	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTGTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	21669008	21666737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_21667592_21668412_21668490_21668585_21668677_21668966
ENSMUSG00000074476.7_21666874_21669115_1	chr9	-	1023	4	NNC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	2463	-136	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTTAAGAGCACACTGAT	NA	NA	NA	NA	NA	NA	NA	NA	21669115	21666873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_21667592_21668412_21668490_21668585_21668696_21668997
ENSMUSG00000074476.7_21666884_21669115_1	chr9	-	1030	4	NNC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	2463	-146	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGCTCAGTGGTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	21669115	21666883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_21667592_21668412_21668490_21668585_21668696_21668980
ENSMUSG00000074476.7_21666910_21669115_1	chr9	-	999	4	ISM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	2484	172	2463	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTGCAGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	21669115	21666909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980
ENSMUSG00000074476.7_21666918_21669115_1	chr9	-	991	4	ISM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	2484	180	2463	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAACAAAAATGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	21669115	21666917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980
ENSMUSG00000074476.7_21666924_21669115_1	chr9	-	973	4	NNC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	2463	-186	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	21669115	21666923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_21667592_21668412_21668490_21668585_21668696_21668997
ENSMUSG00000074476.7_21667050_21671578_3	chr9	-	1033	5	FSM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	21	312	0	254	multi-exon	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGAGGCAGGCGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	21671578	21667049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671414
ENSMUSG00000074476.7_21667050_21671578_6	chr9	-	1033	5	NNC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	0	254	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGAGGCAGGCGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	21671578	21667049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_21667592_21668412_21668490_21668585_21668696_21668985_21669126_21671414
ENSMUSG00000074513.10_84405043_84436572_1	chr3	-	920	6	ISM	ENSMUSG00000074513.10	ENSMUST00000143514.3	1343	9	53360	0	53220	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCCCCTGGAAAAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	84436572	84405042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84436476
ENSMUSG00000074513.10_84417192_84455310_1	chr3	-	866	7	ISM	ENSMUSG00000074513.10	ENSMUST00000143514.3	1343	9	34622	12149	34482	-12149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCAAATACATAAGGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84455310	84417191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84436476_84436573_84441893_84442003_84455240
ENSMUSG00000074513.10_84426865_84489867_1	chr3	-	580	6	ISM	ENSMUSG00000074513.10	ENST00000451320.6	2968	9	126	23519	-26	-21822	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGATGGTGCACACCC	NA	NA	NA	NA	NA	NA	NA	NA	84489867	84426864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_84427011_84434992_84435106_84436476_84436573_84441893_84442003_84455240_84455343_84489853
ENSMUSG00000074513.10_84426933_84489932_1	chr3	-	577	6	ISM	ENSMUSG00000074513.10	ENST00000451320.6	2968	9	61	23587	0	-21890	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATTAAGAGATAATAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	84489932	84426932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_84427011_84434992_84435106_84436476_84436573_84441893_84442003_84455240_84455343_84489853
ENSMUSG00000074513.10_84426985_84489977_1	chr3	-	570	6	ISM	ENSMUSG00000074513.10	ENST00000451320.6	2968	9	16	23639	16	-21942	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGGCCGTGGCTCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	84489977	84426984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_84427011_84434992_84435106_84436476_84436573_84441893_84442003_84455240_84455343_84489853
ENSMUSG00000074570.15_172235821_172268589_1	chr2	+	745	5	ISM	ENSMUSG00000074570.15	ENSMUST00000228775.2	2629	6	0	6191	0	-2885	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACAAGGTGGTGGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	172235820	172268589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172235926_172258039_172258463_172265518_172265621_172266519_172266601_172268555
ENSMUSG00000074570.15_172235821_172268641_1	chr2	+	797	5	ISM	ENSMUSG00000074570.15	ENSMUST00000228775.2	2629	6	0	6139	0	-2833	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCATGACACTCCGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	172235820	172268641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172235926_172258039_172258463_172265518_172265621_172266519_172266601_172268555
ENSMUSG00000074570.15_172258119_172268835_1	chr2	+	807	4	ISM	ENSMUSG00000074570.15	ENSMUST00000228775.2	2629	6	22298	5945	72	-2639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAACGTCCAGGGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	172258118	172268835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172258463_172265518_172265621_172266519_172266601_172268555
ENSMUSG00000074570.15_172258130_172268946_1	chr2	+	745	4	ISM	ENSMUSG00000074570.15	ENST00000679529.1	2138	5	83	5617	83	-2528	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCCCTAAAGCCATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	172258129	172268946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172258301_172265518_172265621_172266519_172266601_172268555
ENSMUSG00000074570.15_172258192_172268886_1	chr2	+	785	4	ISM	ENSMUSG00000074570.15	ENSMUST00000228775.2	2629	6	22371	5894	145	-2588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCCAGGTTTCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	172258191	172268886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172258463_172265518_172265621_172266519_172266601_172268555
ENSMUSG00000074570.15_172258199_172269026_1	chr2	+	756	4	ISM	ENSMUSG00000074570.15	ENST00000679529.1	2138	5	152	5537	152	-2448	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGGCAGAGAGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	172258198	172269026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172258301_172265518_172265621_172266519_172266601_172268555
ENSMUSG00000074570.15_172258250_172269089_1	chr2	+	768	4	ISM	ENSMUSG00000074570.15	ENST00000679529.1	2138	5	203	5474	203	-2385	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACTCGGACCGATTATC	NA	NA	NA	NA	NA	NA	NA	NA	172258249	172269089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172258301_172265518_172265621_172266519_172266601_172268555
ENSMUSG00000074570.15_172265601_172269210_1	chr2	+	756	3	ISM	ENSMUSG00000074570.15	ENST00000679529.1	2138	5	7554	5353	7554	-2264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATGGACGTGGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	172265600	172269210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172265621_172266519_172266601_172268555
ENSMUSG00000074570.15_172266586_172269318_1	chr2	+	778	2	ISM	ENSMUSG00000074570.15	ENST00000679529.1	2138	5	8539	5245	8539	-2156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTCCTTGGAAACCAAC	NA	NA	NA	NA	NA	NA	NA	NA	172266585	172269318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172266601_172268555
ENSMUSG00000074570.15_172269236_172274316_1	chr2	+	774	2	ISM	ENSMUSG00000074570.15	ENST00000679529.1	2138	5	11189	247	11189	-247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAAGCTAGTCATCACAG	NA	NA	NA	NA	NA	NA	NA	NA	172269235	172274316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172269846_172274152
ENSMUSG00000074570.15_172269315_172274377_1	chr2	+	756	2	ISM	ENSMUSG00000074570.15	ENST00000679529.1	2138	5	11268	186	11268	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAGATGAACGCAATGA	NA	NA	NA	NA	NA	NA	NA	NA	172269314	172274377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172269846_172274152
ENSMUSG00000074570.15_172269516_172274550_1	chr2	+	728	2	ISM	ENSMUSG00000074570.15	ENST00000679529.1	2138	5	11469	13	11469	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTTGGAATGAAGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	172269515	172274550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_172269846_172274152
ENSMUSG00000074577.10_167822743_167827692_1	chr2	-	1060	8	ISM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	14675	0	14675	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCCGTGATCAACGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	167827692	167822742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167822841_167823190_167823282_167824698_167824783_167824963_167825167_167825615_167825778_167826364_167826527_167826992_167827129_167827568
ENSMUSG00000074577.10_167823236_167828446_1	chr2	-	971	8	ISM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	13921	493	13921	-493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGCCGTGCGAGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	167828446	167823235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167823282_167824698_167824783_167824963_167825167_167825615_167825778_167826364_167826527_167826992_167827129_167827568_167827693_167828392
ENSMUSG00000074577.10_167824999_167831238_1	chr2	-	948	7	ISM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	11129	2256	11129	-2256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCGCGGCCAGGAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	167831238	167824998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167825167_167825615_167825778_167826364_167826527_167826992_167827129_167827568_167827693_167828392_167828524_167831173
ENSMUSG00000074577.10_167825029_167831310_1	chr2	-	990	7	ISM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	11057	2286	11057	-2286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGCAGGGCGGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	167831310	167825028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167825167_167825615_167825778_167826364_167826527_167826992_167827129_167827568_167827693_167828392_167828524_167831173
ENSMUSG00000074577.10_167825102_167831363_1	chr2	-	970	7	ISM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	11004	2359	11004	-2359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAAGCCAGCTGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	167831363	167825101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167825167_167825615_167825778_167826364_167826527_167826992_167827129_167827568_167827693_167828392_167828524_167831173
ENSMUSG00000074577.10_167825627_167831464_1	chr2	-	995	6	ISM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	10903	2884	10903	-2884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAAGGAAGGTAGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	167831464	167825626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167825778_167826364_167826527_167826992_167827129_167827568_167827693_167828392_167828524_167831173
ENSMUSG00000074577.10_167825680_167831538_1	chr2	-	1016	6	ISM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	10829	2937	10829	-2937	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACCTGCAGCGGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	167831538	167825679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167825778_167826364_167826527_167826992_167827129_167827568_167827693_167828392_167828524_167831173
ENSMUSG00000074577.10_167825750_167831583_1	chr2	-	991	6	ISM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	10784	3007	10784	-3007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGGTGGGCTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	167831583	167825749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167825778_167826364_167826527_167826992_167827129_167827568_167827693_167828392_167828524_167831173
ENSMUSG00000074577.10_167826433_167831687_1	chr2	-	999	5	ISM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	10680	3690	10680	-3690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGCCAGCTCAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	167831687	167826432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167826527_167826992_167827129_167827568_167827693_167828392_167828524_167831173
ENSMUSG00000074577.10_167826501_167831720_1	chr2	-	964	5	ISM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	10647	3758	10647	-3758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCCTGGCACTGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	167831720	167826500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167826527_167826992_167827129_167827568_167827693_167828392_167828524_167831173
ENSMUSG00000074577.10_167827670_167834615_1	chr2	-	982	5	ISM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	7752	4927	7752	-4927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCATCACTGAAGGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	167834615	167827669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167827693_167828392_167828524_167831173_167831726_167833094_167833225_167834469
ENSMUSG00000074577.10_167828458_167834767_1	chr2	-	970	5	ISM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	7600	5715	7600	-5715	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTCTGAATGCCGACCT	NA	NA	NA	NA	NA	NA	NA	NA	167834767	167828457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167828524_167831173_167831726_167833094_167833225_167834469_167834616_167834691
ENSMUSG00000074577.10_167831174_167835321_1	chr2	-	1062	6	ISM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	7046	8431	7046	-8431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCCCACCGCATGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	167835321	167831173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167831726_167833094_167833225_167834469_167834616_167834691_167834818_167834936_167834981_167835257
ENSMUSG00000074577.10_167831322_167835454_1	chr2	-	963	7	ISM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	6913	8579	6913	-8579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAAGGGCCAGGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	167835454	167831321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167831726_167833094_167833225_167834469_167834616_167834691_167834818_167834936_167834981_167835257_167835322_167835405
ENSMUSG00000074577.10_167831474_167839185_1	chr2	-	1009	9	ISM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	3182	8731	3182	-8731	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAGGGGCCTCCACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	167839185	167831473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167831726_167833094_167833225_167834469_167834616_167834691_167834818_167834936_167834981_167835257_167835322_167835405_167835556_167836573_167836649_167839163
ENSMUSG00000074577.10_167831606_167842258_1	chr2	-	972	10	ISM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	109	8863	109	-8863	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTACTAGAGATGGATTC	NA	NA	NA	NA	NA	NA	NA	NA	167842258	167831605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167831726_167833094_167833225_167834469_167834616_167834691_167834818_167834936_167834981_167835257_167835322_167835405_167835556_167836573_167836649_167839163_167839243_167842220
ENSMUSG00000074577.10_167831661_167842308_1	chr2	-	967	10	ISM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	59	8918	59	-8918	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTACCTATCTGACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	167842308	167831660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167831726_167833094_167833225_167834469_167834616_167834691_167834818_167834936_167834981_167835257_167835322_167835405_167835556_167836573_167836649_167839163_167839243_167842220
ENSMUSG00000074578.15_166904936_166907642_1	chr2	+	516	5	FSM	ENSMUSG00000074578.15	ENSMUST00000189909.7	738	5	82	140	82	-140	multi-exon	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCAGCCCCACAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	166904935	166907642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907353_166907401_166907606
ENSMUSG00000074578.15_166905143_166907782_2	chr2	+	449	5	FSM	ENSMUSG00000074578.15	ENSMUST00000189909.7	738	5	289	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	166905142	166907782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907353_166907401_166907606
ENSMUSG00000074579.15_65573689_65591473_1	chr3	+	294	3	FSM	ENSMUSG00000074579.15	ENSMUST00000099075.4	2461	3	40	2127	0	-2127	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGCCAGGAGTTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	65573688	65591473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_65573733_65576510_65576600_65591312
ENSMUSG00000074604.10_51584986_51590098_1	chr3	+	377	3	ISM	ENSMUSG00000074604.10	ENSMUST00000099106.10	603	5	16386	-2	16340	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGGCTTTGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	51584985	51590098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_51585057_51589217_51589300_51589874
ENSMUSG00000074607.12_163067374_163117906_1	chr2	+	218	3	ISM	ENSMUSG00000074607.12	ENSMUST00000165937.8	1675	9	0	47116	0	-47116	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGTAACGAAGACTATGA	NA	NA	NA	NA	NA	NA	NA	NA	163067373	163117906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163067508_163089686_163089753_163117888
ENSMUSG00000074607.12_163067477_163118018_1	chr2	+	227	3	ISM	ENSMUSG00000074607.12	ENSMUST00000165937.8	1675	9	103	47004	103	-47004	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGCCCAACGGTCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	163067476	163118018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163067508_163089686_163089753_163117888
ENSMUSG00000074607.12_163117966_163156294_1	chr2	+	222	2	ISM	ENSMUSG00000074607.12	ENSMUST00000165937.8	1675	9	50592	8728	50592	-8728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTGCTGGGCCGCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	163117965	163156294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163118135_163156241
ENSMUSG00000074607.12_163118028_163156339_1	chr2	+	205	2	ISM	ENSMUSG00000074607.12	ENSMUST00000165937.8	1675	9	50654	8683	50654	-8683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGCCAGTCTCAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	163118027	163156339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163118135_163156241
ENSMUSG00000074607.12_163118074_163156409_1	chr2	+	229	2	ISM	ENSMUSG00000074607.12	ENSMUST00000165937.8	1675	9	50700	8613	50700	-8613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGGAGCAAGTCAGCGAC	NA	NA	NA	NA	NA	NA	NA	NA	163118073	163156409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163118135_163156241
ENSMUSG00000074607.12_163156346_163157786_1	chr2	+	208	2	ISM	ENSMUSG00000074607.12	ENSMUST00000165937.8	1675	9	88972	7236	88972	-7236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCCAATGAGCCACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	163156345	163157786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163156482_163157714
ENSMUSG00000074607.12_163156387_163157847_1	chr2	+	228	2	ISM	ENSMUSG00000074607.12	ENSMUST00000165937.8	1675	9	89013	7175	89013	-7175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCATCAAGGGGCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	163156386	163157847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163156482_163157714
ENSMUSG00000074607.12_163156447_163157888_1	chr2	+	209	2	ISM	ENSMUSG00000074607.12	ENSMUST00000165937.8	1675	9	89073	7134	89073	-7134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCCAAAATAGTGGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	163156446	163157888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163156482_163157714
ENSMUSG00000074607.12_163157758_163162251_1	chr2	+	219	2	ISM	ENSMUSG00000074607.12	ENST00000358131.5	2243	8	90569	3035	90384	-2771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCAAACCCACCAGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	163157757	163162251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163157943_163162217
ENSMUSG00000074607.12_163157814_163162305_1	chr2	+	217	2	ISM	ENSMUSG00000074607.12	ENST00000358131.5	2243	8	90625	2981	90440	-2717	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCCTGGCTTCCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	163157813	163162305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163157943_163162217
ENSMUSG00000074607.12_163157863_163162385_1	chr2	+	248	2	ISM	ENSMUSG00000074607.12	ENST00000358131.5	2243	8	90674	2901	90489	-2637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCTCCAAGGCCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	163157862	163162385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163157943_163162217
ENSMUSG00000074607.12_163162462_163163416_1	chr2	+	225	2	ISM	ENSMUSG00000074607.12	ENSMUST00000165937.8	1675	9	95088	1606	95088	-1606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTGGGATGGGAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	163162461	163163416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163162611_163163340
ENSMUSG00000074607.12_163162557_163164711_1	chr2	+	230	3	ISM	ENSMUSG00000074607.12	ENSMUST00000099110.10	2166	9	95274	511	95183	-311	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCCCTGAGGCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	163162556	163164711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_163162611_163163340_163163469_163164663
ENSMUSG00000074643.13_155915867_155920321_1	chr2	-	768	9	ISM	ENSMUSG00000074643.13	ENST00000352393.8	1940	18	33508	439	33500	-439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCCGTGATCATCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	155920321	155915866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251
ENSMUSG00000074649.7_155660413_155661193_1	chr2	-	698	2	NNC	ENSMUSG00000074649.7	novel	1615	2	NA	NA	153	-763	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTGCTGGTTAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	155661193	155660412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_155661004_155661086
ENSMUSG00000074649.7_155660488_155661241_1	chr2	-	671	2	NNC	ENSMUSG00000074649.7	novel	1615	2	NA	NA	105	-838	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCACAATGACCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	155661241	155660487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_155661004_155661086
ENSMUSG00000074653.11_30733397_30735161_1	chr3	-	221	2	ISM	ENSMUSG00000074653.11	ENST00000523069.1	1347	7	10304	193	10304	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTCGACCCTCAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	30735161	30733396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_30733551_30735094
ENSMUSG00000074653.11_30733452_30735217_1	chr3	-	222	2	ISM	ENSMUSG00000074653.11	ENST00000523069.1	1347	7	10248	248	10248	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCATCCTCTGCCAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	30735217	30733451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_30733551_30735094
ENSMUSG00000074653.11_30733512_30739029_1	chr3	-	229	3	ISM	ENSMUSG00000074653.11	ENST00000523069.1	1347	7	6436	308	6436	-308	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAGCGACACTACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	30739029	30733511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_30733551_30735094_30735263_30739007
ENSMUSG00000074653.11_30735213_30741583_1	chr3	-	238	3	ISM	ENSMUSG00000074653.11	ENST00000523069.1	1347	7	3882	2009	3882	1616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGTGTGTTGGTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	30741583	30735212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_30735263_30739007_30739176_30741563
ENSMUSG00000074653.11_30743423_30745349_1	chr3	-	245	3	ISM	ENSMUSG00000074653.11	ENST00000523069.1	1347	7	116	10219	116	-6594	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGACCTTTCCAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	30745349	30743422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_30743456_30743998_30744167_30745305
ENSMUSG00000074653.11_30744051_30745412_1	chr3	-	223	2	ISM	ENSMUSG00000074653.11	ENST00000523069.1	1347	7	53	10847	53	-7222	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTGAACTTGTGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	30745412	30744050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_30744167_30745305
ENSMUSG00000074653.11_30744101_30745463_1	chr3	-	224	2	ISM	ENSMUSG00000074653.11	ENST00000523069.1	1347	7	2	10897	2	-7272	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGTTGCCTCGGGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	30745463	30744100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_30744167_30745305
ENSMUSG00000074656.13_154713330_154734855_1	chr2	-	2535	9	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	5284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATTGCTTTTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	154734855	154713329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_154714821_154715468_154715555_154718535_154718593_154719597_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ENSMUSG00000074656.13_154713330_154734855_2	chr2	-	2536	9	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	4512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATTGCTTTTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	154734855	154713329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720479_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ENSMUSG00000074656.13_154713330_154734855_3	chr2	-	2533	9	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	4617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATTGCTTTTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	154734855	154713329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726358_154729623_154729728_154730102_154730281_154734609
ENSMUSG00000074656.13_154713330_154734855_4	chr2	-	2535	9	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	4780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATTGCTTTTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	154734855	154713329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_154714821_154715468_154715555_154718542_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ENSMUSG00000074657.6_127064024_127073640_1	chr10	-	1534	14	ISM	ENSMUSG00000074657.6	ENST00000286452.5	3468	26	25333	143	25309	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATAGACTCGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	127073640	127064023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127064291_127065613_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585
ENSMUSG00000074657.6_127064184_127074628_1	chr10	-	1523	15	ISM	ENSMUSG00000074657.6	ENST00000286452.5	3468	26	24345	303	24321	-303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCCGTATCTCTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	127074628	127064183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127064291_127065613_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613
ENSMUSG00000074657.6_127064244_127074673_1	chr10	-	1508	15	ISM	ENSMUSG00000074657.6	ENST00000286452.5	3468	26	24300	363	24276	-363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCTCTGACACTAACTC	NA	NA	NA	NA	NA	NA	NA	NA	127074673	127064243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127064291_127065613_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613
ENSMUSG00000074657.6_127065679_127075098_1	chr10	-	1539	15	ISM	ENSMUSG00000074657.6	ENSMUST00000217895.2	3996	28	23851	760	23851	-760	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTCTCCACCAAGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	127075098	127065678	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042
ENSMUSG00000074657.6_127066437_127075249_1	chr10	-	1616	13	ISM	ENSMUSG00000074657.6	ENSMUST00000217895.2	3996	28	23700	1518	23700	-1518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGATGAAGACGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	127075249	127066436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042
ENSMUSG00000074657.6_127067205_127077935_1	chr10	-	1554	13	ISM	ENSMUSG00000074657.6	ENSMUST00000217895.2	3996	28	21014	2286	21014	-2286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGTACAAGAGCTCCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	127077935	127067204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799
ENSMUSG00000074657.6_127067263_127078546_1	chr10	-	1556	14	ISM	ENSMUSG00000074657.6	ENSMUST00000217895.2	3996	28	20403	2344	20403	-2344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCTATGAAGGACAAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	127078546	127067262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526
ENSMUSG00000074657.6_127067320_127078597_1	chr10	-	1550	14	ISM	ENSMUSG00000074657.6	ENSMUST00000217895.2	3996	28	20352	2401	20352	-2401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTACGGCTGAGAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	127078597	127067319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526
ENSMUSG00000074657.6_127071923_127079621_1	chr10	-	1586	12	ISM	ENSMUSG00000074657.6	ENSMUST00000217895.2	3996	28	19328	7004	19328	-7004	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGACACACCTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	127079621	127071922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516
ENSMUSG00000074657.6_127072590_127081343_1	chr10	-	1609	12	ISM	ENSMUSG00000074657.6	ENSMUST00000217895.2	3996	28	17606	7671	17606	-7671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGGCGGGGCTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	127081343	127072589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218
ENSMUSG00000074657.6_127073166_127081871_1	chr10	-	1578	12	ISM	ENSMUSG00000074657.6	ENSMUST00000217895.2	3996	28	17078	8247	17078	-8247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCTCCTTGGATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	127081871	127073165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815
ENSMUSG00000074657.6_127073622_127098683_1	chr10	-	1520	13	ISM	ENSMUSG00000074657.6	ENST00000286452.5	3468	26	290	9741	266	-8703	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGCTGTCATCTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	127098683	127073621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127098636
ENSMUSG00000074657.6_127073682_127098737_1	chr10	-	1514	13	ISM	ENSMUSG00000074657.6	ENST00000286452.5	3468	26	236	9801	212	-8763	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGTCGGCAGCTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	127098737	127073681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127098636
ENSMUSG00000074657.6_127073729_127098796_1	chr10	-	1526	13	ISM	ENSMUSG00000074657.6	ENST00000286452.5	3468	26	177	9848	153	-8810	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCTACATCAGCAAGATC	NA	NA	NA	NA	NA	NA	NA	NA	127098796	127073728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127098636
ENSMUSG00000074657.6_127074642_127098949_1	chr10	-	1605	12	ISM	ENSMUSG00000074657.6	ENST00000286452.5	3468	26	24	10761	0	-9723	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCGTGGGCAACGGCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	127098949	127074641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127098636
ENSMUSG00000074657.6_127074688_127098949_1	chr10	-	1559	12	ISM	ENSMUSG00000074657.6	ENST00000286452.5	3468	26	24	10807	0	-9769	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGTGCTGAATGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	127098949	127074687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127098636
ENSMUSG00000074673.16_152818115_152842172_1	chr2	+	480	6	ISM	ENSMUSG00000074673.16	ENST00000620043.4	801	8	45	2762	45	-2762	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTCTATGGCTATGACA	NA	NA	NA	NA	NA	NA	NA	NA	152818114	152842172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152818164_152833497_152833589_152835088_152835130_152835983_152836072_152841218_152841278_152842020
ENSMUSG00000074673.16_152835087_152844847_1	chr2	+	531	6	ISM	ENSMUSG00000074673.16	ENST00000620043.4	801	8	17017	87	17017	-87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGATCTCATGTGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	152835086	152844847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152835130_152835983_152836072_152841218_152841278_152842020_152842218_152844163_152844278_152844817
ENSMUSG00000074673.16_152835983_152844847_1	chr2	+	489	5	ISM	ENSMUSG00000074673.16	ENST00000620043.4	801	8	17913	87	17913	-87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGATCTCATGTGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	152835982	152844847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152836072_152841218_152841278_152842020_152842218_152844163_152844278_152844817
ENSMUSG00000074698.11_152068796_152122724_1	chr2	+	2911	12	FSM	ENSMUSG00000074698.11	ENST00000349736.10	3961	12	5	1045	5	-559	multi-exon	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTAGTTCCCCATTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	152068795	152122724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_152068912_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ENSMUSG00000074698.11_152068833_152122775_1	chr2	+	2925	12	FSM	ENSMUSG00000074698.11	ENST00000349736.10	3961	12	42	994	-23	-508	multi-exon	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCATCATAGATAAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	152068832	152122775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_152068912_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ENSMUSG00000074698.11_152068833_152122863_1	chr2	+	3013	12	FSM	ENSMUSG00000074698.11	ENST00000349736.10	3961	12	42	906	-23	-420	multi-exon	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGTGGTGGCTTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	152068832	152122863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_152068912_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ENSMUSG00000074698.11_152099860_152123081_1	chr2	+	2939	9	ISM	ENSMUSG00000074698.11	ENST00000349736.10	3961	12	31069	688	31004	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGAGATGCAGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	152099859	152123081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ENSMUSG00000074698.11_152102679_152123283_1	chr2	+	3029	7	ISM	ENSMUSG00000074698.11	ENST00000645260.1	3509	11	33823	0	33823	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAAGAGCTGAGGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	152102678	152123283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ENSMUSG00000074698.11_152105101_152123283_1	chr2	+	2947	6	ISM	ENSMUSG00000074698.11	ENST00000645260.1	3509	11	36245	0	36245	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAAGAGCTGAGGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	152105100	152123283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ENSMUSG00000074698.11_152114545_152123398_1	chr2	+	2952	5	ISM	ENSMUSG00000074698.11	ENST00000645260.1	3509	11	45689	-115	45689	115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGAGTGGGTGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	152114544	152123398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ENSMUSG00000074698.11_152117348_152123606_1	chr2	+	2924	3	ISM	ENSMUSG00000074698.11	ENST00000349736.10	3961	12	48557	163	48492	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCCTTCCCCCCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	152117347	152123606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152117467_152118866_152118954_152120888
ENSMUSG00000074698.11_152118867_152123772_1	chr2	+	2971	2	ISM	ENSMUSG00000074698.11	ENST00000349736.10	3961	12	50076	-3	50011	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCATGCAGCCTGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	152118866	152123772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_152118954_152120888
ENSMUSG00000074704.10_151487151_151499461_1	chr2	-	1098	7	NIC	ENSMUSG00000074704.10	novel	1861	13	NA	NA	10992	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGACAGGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	151499461	151487150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_151487513_151490995_151491074_151493807_151493898_151495379_151495496_151496509_151496620_151497032_151497260_151499346
ENSMUSG00000074704.10_151487324_151502611_1	chr2	-	1066	9	NIC	ENSMUSG00000074704.10	novel	1861	13	NA	NA	7842	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATCCGCAGCATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	151502611	151487323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_151487513_151490995_151491074_151493807_151493898_151495379_151495496_151496509_151496620_151497032_151497260_151499346_151499461_151500278_151500372_151502562
ENSMUSG00000074704.10_151487432_151502691_1	chr2	-	1038	9	NIC	ENSMUSG00000074704.10	novel	1861	13	NA	NA	7762	-108	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATACTCTTCTCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	151502691	151487431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_151487513_151490995_151491074_151493807_151493898_151495379_151495496_151496509_151496620_151497032_151497260_151499346_151499461_151500278_151500372_151502562
ENSMUSG00000074704.10_151487497_151502731_1	chr2	-	1013	9	NIC	ENSMUSG00000074704.10	novel	1861	13	NA	NA	7722	-173	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCAGTCCTTTAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	151502731	151487496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_151487513_151490995_151491074_151493807_151493898_151495379_151495496_151496509_151496620_151497032_151497260_151499346_151499461_151500278_151500372_151502562
ENSMUSG00000074704.10_151491034_151506329_1	chr2	-	1021	9	NIC	ENSMUSG00000074704.10	novel	1861	13	NA	NA	4124	-3710	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATCAAAGATTATTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	151506329	151491033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_151491074_151493807_151493898_151495379_151495496_151496509_151496620_151497032_151497260_151499346_151499461_151500278_151500372_151502562_151502734_151506269
ENSMUSG00000074704.10_151493851_151508279_1	chr2	-	1013	9	ISM	ENSMUSG00000074704.10	ENST00000683101.1	1861	13	2202	6700	2174	-6527	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAATGGGTCCTTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	151508279	151493850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_151493895_151495379_151495496_151496509_151496620_151497032_151497260_151499346_151499461_151500278_151500372_151502562_151502734_151506269_151506377_151508248
ENSMUSG00000074704.10_151495448_151509867_1	chr2	-	1006	9	ISM	ENSMUSG00000074704.10	ENST00000683101.1	1861	13	614	8297	586	-8124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGATGTGACTGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	151509867	151495447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_151495496_151496509_151496620_151497032_151497260_151499346_151499461_151500278_151500372_151502562_151502734_151506269_151506377_151508248_151508343_151509825
ENSMUSG00000074704.10_151497033_151510453_1	chr2	-	1080	8	ISM	ENSMUSG00000074704.10	ENSMUST00000180195.8	1659	13	0	9709	0	-9709	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGCTTCCATCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	151510453	151497032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_151497260_151499346_151499461_151500278_151500372_151502562_151502734_151506269_151506377_151508248_151508343_151509825_151509956_151510309
ENSMUSG00000074749.11_146697829_146732978_1	chr2	+	1166	6	ISM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	45	79039	45	-79039	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAGCAGCGACCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	146697828	146732978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146697964_146703039_146703103_146705626_146705790_146712685_146712767_146730940_146731587_146732900
ENSMUSG00000074749.11_146697829_146733024_1	chr2	+	1212	6	ISM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	45	78993	45	-78993	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGAGAGTCTGGCCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	146697828	146733024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146697964_146703039_146703103_146705626_146705790_146712685_146712767_146730940_146731587_146732900
ENSMUSG00000074749.11_146705625_146733204_1	chr2	+	1196	4	ISM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	7841	78813	7841	-78813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCATTCTTTTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	146705624	146733204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146705790_146712685_146712767_146730940_146731587_146732900
ENSMUSG00000074749.11_146712724_146783974_1	chr2	+	1120	5	ISM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	14940	28043	14940	-28043	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCAGCTATTCACAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	146712723	146783974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146712767_146730940_146731587_146732900_146733205_146777722_146777805_146783929
ENSMUSG00000074749.11_146730939_146784095_1	chr2	+	1200	4	ISM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	33155	27922	33155	-27922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTATTGTTTGCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	146730938	146784095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146731587_146732900_146733205_146777722_146777805_146783929
ENSMUSG00000074749.11_146731078_146792508_1	chr2	+	1190	6	ISM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	33294	19509	33294	-19509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGTTACAAGCCTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	146731077	146792508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146731587_146732900_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442
ENSMUSG00000074749.11_146731238_146794964_1	chr2	+	1097	7	ISM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	33454	17053	33454	-17053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAAAGTCAGTTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	146731237	146794964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146731587_146732900_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442_146792509_146794897
ENSMUSG00000074749.11_146731389_146811507_1	chr2	+	1107	9	ISM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	33605	510	33605	-510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGAAATAGACACAAATT	NA	NA	NA	NA	NA	NA	NA	NA	146731388	146811507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146731587_146732900_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442_146792509_146794897_146794985_146798119_146798217_146811463
ENSMUSG00000074749.11_146731507_146812017_1	chr2	+	1130	10	ISM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	33723	0	33723	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCACTGTAATTAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	146731506	146812017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_146731587_146732900_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442_146792509_146794897_146794985_146798119_146798217_146811463_146811508_146811876
ENSMUSG00000074764.12_140072687_140089944_1	chr2	-	780	6	ISM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	92115	0	92115	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTTGTCTCAAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	140089944	140072686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_140072816_140082818_140082992_140085833_140085909_140086019_140086186_140087265_140087415_140089856
ENSMUSG00000074764.12_140072786_140089897_1	chr2	-	295	4	ISM	ENSMUSG00000074764.12	ENST00000378072.5	1530	16	92162	99	92162	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTGCTCAGACAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	140089897	140072785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_140072816_140085833_140085909_140087265_140087415_140089856
ENSMUSG00000074764.12_140082909_140098924_1	chr2	-	735	8	ISM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	83135	10222	83135	-10222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTACAGCATCGCAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	140098924	140082908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_140082992_140085833_140085909_140086019_140086186_140087265_140087415_140089856_140089945_140090473_140090537_140097199_140097278_140098891
ENSMUSG00000074764.12_140085876_140105346_1	chr2	-	761	9	ISM	ENSMUSG00000074764.12	ENSMUST00000122367.8	2216	20	126278	14101	76713	-13189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAATGGCACTTCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	140105346	140085875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_140085909_140086019_140086186_140087265_140087415_140089856_140089945_140090473_140090537_140097199_140097278_140098891_140098961_140104586_140104644_140105288
ENSMUSG00000074764.12_140087266_140107845_1	chr2	-	801	9	ISM	ENSMUSG00000074764.12	ENSMUST00000122367.8	2216	20	123779	15491	74214	-14579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAACAGGGGTGGCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	140107845	140087265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_140087415_140089856_140089945_140090473_140090537_140097199_140097278_140098891_140098961_140104586_140104644_140105288_140105444_140107617_140107700_140107785
ENSMUSG00000074764.12_140087383_140098939_1	chr2	-	309	5	ISM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	83120	14696	83120	-14696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTCAAATACTTTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	140098939	140087382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_140087415_140089856_140089945_140090473_140090537_140097199_140097278_140098891
ENSMUSG00000074764.12_140090474_140117490_1	chr2	-	788	9	ISM	ENSMUSG00000074764.12	ENSMUST00000122367.8	2216	20	114134	18699	64569	-17787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTCAATAAGCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	140117490	140090473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_140090537_140097199_140097278_140098891_140098961_140104586_140104644_140105288_140105444_140107617_140107700_140107785_140107846_140108279_140108334_140117320
ENSMUSG00000074764.12_140090495_140105371_1	chr2	-	329	5	ISM	ENSMUSG00000074764.12	ENSMUST00000122367.8	2216	20	126253	18720	76688	-17808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAAAAGGTGTTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	140105371	140090494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_140090537_140097199_140097278_140098891_140098961_140104586_140104644_140105288
ENSMUSG00000074764.12_140105404_140117388_1	chr2	-	304	5	ISM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	64671	32717	64671	30369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGAGGCTAACCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	140117388	140105403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_140105444_140107617_140107700_140107785_140107846_140108279_140108334_140117320
ENSMUSG00000074764.12_140117361_140146598_1	chr2	-	296	3	ISM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	35461	44674	35461	18412	internal_fragment	TRUE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCCTTGGCTAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	140146598	140117360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_140117484_140127123_140127227_140146528
ENSMUSG00000074764.12_140117399_140146662_1	chr2	-	322	3	ISM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	35397	44712	35397	18374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCGGCATGCAAAACATAAC	NA	NA	NA	NA	NA	NA	NA	NA	140146662	140117398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_140117484_140127123_140127227_140146528
ENSMUSG00000074764.12_140117468_140146697_1	chr2	-	288	3	ISM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	35362	44781	35362	18305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAGCAGCCAACATGGG	NA	NA	NA	NA	NA	NA	NA	NA	140146697	140117467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_140117484_140127123_140127227_140146528
ENSMUSG00000074764.12_140127124_140182047_1	chr2	-	298	3	ISM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	12	54437	12	8649	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATCTAGTGCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	140182047	140127123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_140127227_140146528_140146698_140182021
ENSMUSG00000074781.6_95351047_95377273_1	chr10	+	260	2	ISM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	40	4246	40	-4246	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGACAAGTTGGGAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	95351046	95377273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_95351100_95377066
ENSMUSG00000074781.6_95377137_95377640_1	chr10	+	318	2	ISM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	26130	3879	26130	-3879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTAATATCTATTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	95377136	95377640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_95377314_95377499
ENSMUSG00000074781.6_95377254_95378197_1	chr10	+	265	3	ISM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	26247	3322	26247	-3322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTTCTCCTGTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	95377253	95378197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_95377314_95377499_95377641_95378133
ENSMUSG00000074781.6_95377593_95378326_1	chr10	+	241	2	ISM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	26586	3193	26586	-3193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGTCCTGATTCACT	NA	NA	NA	NA	NA	NA	NA	NA	95377592	95378326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_95377641_95378133
ENSMUSG00000074785.6_94628733_94630588_1	chr10	-	636	3	ISM	ENSMUSG00000074785.6	ENST00000545312.1	1764	12	34901	0	34901	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATCTAAGTGGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	94630588	94628732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_94629153_94630277_94630353_94630447
ENSMUSG00000074785.6_94628874_94632293_1	chr10	-	557	4	ISM	ENSMUSG00000074785.6	ENST00000545312.1	1764	12	33196	141	33196	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGCCTGTGGGTATATC	NA	NA	NA	NA	NA	NA	NA	NA	94632293	94628873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_94629153_94630277_94630353_94630447_94630589_94632231
ENSMUSG00000074785.6_94629000_94633878_1	chr10	-	550	5	ISM	ENSMUSG00000074785.6	ENST00000545312.1	1764	12	31611	267	31611	-267	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAAACTGGCTGCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	94633878	94628999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_94629153_94630277_94630353_94630447_94630589_94632231_94632380_94633845
ENSMUSG00000074785.6_94629048_94634000_1	chr10	-	624	5	ISM	ENSMUSG00000074785.6	ENST00000545312.1	1764	12	31489	315	31489	-315	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCCTGGGGCCTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	94634000	94629047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_94629153_94630277_94630353_94630447_94630589_94632231_94632380_94633845
ENSMUSG00000074785.6_94629080_94633931_1	chr10	-	523	5	ISM	ENSMUSG00000074785.6	ENST00000545312.1	1764	12	31558	347	31558	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGATGAAAAGAAGAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	94633931	94629079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_94629153_94630277_94630353_94630447_94630589_94632231_94632380_94633845
ENSMUSG00000074785.6_94632337_94649035_1	chr10	-	557	7	ISM	ENSMUSG00000074785.6	ENST00000545312.1	1764	12	16454	3604	16454	-3604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTCTTTGACATTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	94649035	94632336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_94632380_94633845_94634010_94635132_94635241_94635335_94635368_94637322_94637378_94646526_94646631_94648984
ENSMUSG00000074785.6_94633959_94663059_1	chr10	-	555	7	ISM	ENSMUSG00000074785.6	ENST00000545312.1	1764	12	2430	5226	2430	-5226	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAATAGCAGGGCCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	94663059	94633958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_94634010_94635132_94635241_94635335_94635368_94637322_94637378_94646526_94646631_94648984_94649163_94663032
ENSMUSG00000074785.6_94635131_94663179_1	chr10	-	626	6	ISM	ENSMUSG00000074785.6	ENST00000545312.1	1764	12	2310	6398	2310	-6398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCACTGTTCTAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	94663179	94635130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_94635241_94635335_94635368_94637322_94637378_94646526_94646631_94648984_94649163_94663032
ENSMUSG00000074785.6_94635336_94665408_1	chr10	-	627	6	ISM	ENSMUSG00000074785.6	ENST00000545312.1	1764	12	81	6603	81	-6603	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTTGGCAGGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	94665408	94635335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_94635368_94637322_94637378_94646526_94646631_94648984_94649163_94663032_94663180_94665297
ENSMUSG00000074796.11_130526133_130527210_1	chr2	-	717	4	ISM	ENSMUSG00000074796.11	ENST00000647296.1	2682	16	7001	78	7001	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAAAGAGTTGATGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	130527210	130526132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150
ENSMUSG00000074796.11_130526152_130529126_1	chr2	-	1469	9	ISM	ENSMUSG00000074796.11	ENST00000647296.1	2682	16	5085	97	5085	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGTGGATATTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	130529126	130526151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078
ENSMUSG00000074796.11_130526170_130528042_1	chr2	-	1090	7	ISM	ENSMUSG00000074796.11	ENST00000644692.1	2653	17	6169	116	6169	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCGGGTGGGGCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	130528042	130526169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130526424_130526531_130526630_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950
ENSMUSG00000074796.11_130526259_130528123_1	chr2	-	1082	7	ISM	ENSMUSG00000074796.11	ENST00000644692.1	2653	17	6088	205	6088	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATAGCCTAAAGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	130528123	130526258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130526424_130526531_130526630_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950
ENSMUSG00000074796.11_130526322_130528185_1	chr2	-	1081	7	ISM	ENSMUSG00000074796.11	ENST00000644692.1	2653	17	6026	268	6026	-267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGTGGCAACATATGG	NA	NA	NA	NA	NA	NA	NA	NA	130528185	130526321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130526424_130526531_130526630_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950
ENSMUSG00000074796.11_130526329_130529363_1	chr2	-	1450	10	ISM	ENSMUSG00000074796.11	ENST00000642402.1	2810	17	4848	288	4848	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCCTGCTCTGTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	130529363	130526328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290
ENSMUSG00000074796.11_130526532_130529608_1	chr2	-	1522	10	ISM	ENSMUSG00000074796.11	ENST00000642402.1	2810	17	4603	491	4603	-477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGACAAGGCTGGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	130529608	130526531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482
ENSMUSG00000074796.11_130526573_130529135_1	chr2	-	1093	8	ISM	ENSMUSG00000074796.11	ENST00000644692.1	2653	17	5076	519	5076	-518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTCTTTCCCCTCATCAT	NA	NA	NA	NA	NA	NA	NA	NA	130529135	130526572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130526630_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078
ENSMUSG00000074796.11_130526805_130529912_1	chr2	-	1458	11	ISM	ENSMUSG00000074796.11	ENST00000644692.1	2653	17	4299	751	4299	-750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGGCCCTGCTGCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	130529912	130526804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873
ENSMUSG00000074796.11_130526874_130529958_1	chr2	-	1435	11	ISM	ENSMUSG00000074796.11	ENST00000644692.1	2653	17	4253	820	4253	-819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGTGCTGTATGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	130529958	130526873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873
ENSMUSG00000074796.11_130526925_130530018_1	chr2	-	1444	11	ISM	ENSMUSG00000074796.11	ENST00000644692.1	2653	17	4193	871	4193	-870	internal_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGGGCCTGTCCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	130530018	130526924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873
ENSMUSG00000074796.11_130527231_130532820_1	chr2	-	1442	11	ISM	ENSMUSG00000074796.11	ENST00000642402.1	2810	17	1391	1190	1391	-1176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATCCCCACTCCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	130532820	130527230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752
ENSMUSG00000074796.11_130527414_130533391_1	chr2	-	1487	11	ISM	ENSMUSG00000074796.11	ENST00000642402.1	2810	17	820	1373	820	-1359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAGGGCCGTGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	130533391	130527413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309
ENSMUSG00000074796.11_130527520_130533541_1	chr2	-	1340	11	ISM	ENSMUSG00000074796.11	ENST00000647296.1	2682	16	670	1465	670	-1465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAAGGCCATCGGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	130533541	130527519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468
ENSMUSG00000074796.11_130527528_130533525_1	chr2	-	1430	12	ISM	ENSMUSG00000074796.11	ENST00000642402.1	2810	17	686	1487	686	-1473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTCCTTCAAGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	130533525	130527527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468
ENSMUSG00000074796.11_130527951_130533392_1	chr2	-	1139	9	ISM	ENSMUSG00000074796.11	ENST00000644692.1	2653	17	819	1897	819	-1896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGGACACCTTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	130533392	130527950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530006_130532752_130532877_130533309
ENSMUSG00000074796.11_130528087_130534175_1	chr2	-	1439	11	ISM	ENSMUSG00000074796.11	ENST00000642402.1	2810	17	36	2046	36	-2032	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCAGCCCCGTAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	130534175	130528086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533733_130534074
ENSMUSG00000074796.11_130529142_130534169_1	chr2	-	1101	9	ISM	ENSMUSG00000074796.11	ENST00000644692.1	2653	17	42	3088	42	-3087	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTCTTCCTTGCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	130534169	130529141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530006_130532752_130532877_130533309_130533392_130533468_130533733_130534074
ENSMUSG00000074797.12_130509530_130516190_1	chr2	+	555	5	ISM	ENSMUSG00000074797.12	ENSMUST00000103193.5	1390	8	0	7344	0	-7344	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTATCCCTGTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	130509529	130516190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130509856_130513320_130513379_130513475_130513541_130513979_130514054_130516158
ENSMUSG00000074797.12_130509725_130521331_1	chr2	+	553	7	ISM	ENSMUSG00000074797.12	ENSMUST00000103193.5	1390	8	195	2203	195	-2203	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAGCCCAGATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	130509724	130521331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130509856_130513320_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548_130517665_130521254
ENSMUSG00000074797.12_130513319_130522952_1	chr2	+	484	7	ISM	ENSMUSG00000074797.12	ENSMUST00000103193.5	1390	8	3789	582	3789	-582	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTACAGGAGTACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	130513318	130522952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548_130517665_130521254_130521332_130522892
ENSMUSG00000074797.12_130514004_130523116_1	chr2	+	499	5	ISM	ENSMUSG00000074797.12	ENSMUST00000103193.5	1390	8	4474	418	4474	-418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTTGGCTCTGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	130514003	130523116	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130514054_130516158_130516191_130517548_130517665_130521254_130521332_130522892
ENSMUSG00000074797.12_130516159_130523247_1	chr2	+	580	4	ISM	ENSMUSG00000074797.12	ENSMUST00000103193.5	1390	8	6629	287	6629	-287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGATCTTTGTGAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	130516158	130523247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_130516191_130517548_130517665_130521254_130521332_130522892
ENSMUSG00000074802.12_89245799_89257404_1	chr10	-	4750	3	ISM	ENSMUSG00000074802.12	ENSMUST00000105298.3	6305	11	22425	674	22400	-674	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTATTATTTTATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	89257404	89245798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_89250355_89252881_89252990_89257318
ENSMUSG00000074802.12_89246011_89262362_1	chr10	-	4748	5	ISM	ENSMUSG00000074802.12	ENSMUST00000105298.3	6305	11	17467	886	17442	-886	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTACTACTAGTGTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	89262362	89246010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269
ENSMUSG00000074802.12_89246631_89279778_1	chr10	-	4751	11	FSM	ENSMUSG00000074802.12	ENSMUST00000099374.9	6748	11	51	1946	26	-1506	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTATAGGCAGACTAAACC	NA	NA	NA	NA	NA	NA	NA	NA	89279778	89246630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270151_89270224_89272364_89272472_89279716
ENSMUSG00000074802.12_89249872_89266853_1	chr10	-	1160	7	ISM	ENSMUSG00000074802.12	ENST00000266754.9	2164	9	12951	807	12951	-807	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCACTGCACAGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	89266853	89249871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745
ENSMUSG00000074813.15_128142317_128172927_1	chr2	-	763	2	ISM	ENSMUSG00000074813.15	ENSMUST00000239302.2	794	5	98316	-484	2806	229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTGCTCTTTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	128172927	128142316	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_128142917_128172764
ENSMUSG00000074813.15_128214021_128271664_1	chr2	-	978	2	FSM	ENSMUSG00000074813.15	ENSMUST00000239199.2	1105	2	127	0	119	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGTTTCTTAGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	128271664	128214020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_128214348_128271013
ENSMUSG00000074818.14_45018129_45034177_1	chr19	-	1923	11	FSM	ENSMUSG00000074818.14	ENST00000644782.1	1946	11	23	0	-21	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAGGGAGAACAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	45034177	45018128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_45018251_45018418_45018511_45018636_45018729_45024495_45024694_45025169_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856
ENSMUSG00000074818.14_45018129_45034177_2	chr19	-	1918	11	NNC	ENSMUSG00000074818.14	novel	1946	11	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAGGGAGAACAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	45034177	45018128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_45018251_45018418_45018511_45018636_45018729_45024495_45024694_45025174_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856
ENSMUSG00000074818.14_45018129_45034177_3	chr19	-	1917	11	NNC	ENSMUSG00000074818.14	novel	1946	11	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAGGGAGAACAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	45034177	45018128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_45018251_45018418_45018511_45018636_45018729_45024495_45024694_45025169_45025566_45025977_45026039_45027605_45027754_45028017_45028189_45028599_45028775_45029001_45029143_45033856
ENSMUSG00000074818.14_45018129_45034177_4	chr19	-	1918	11	NNC	ENSMUSG00000074818.14	novel	1946	11	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAGGGAGAACAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	45034177	45018128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_45018251_45018418_45018511_45018636_45018729_45024495_45024689_45025169_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856
ENSMUSG00000074818.14_45018129_45034177_5	chr19	-	1916	11	NNC	ENSMUSG00000074818.14	novel	1946	11	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1026	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAGGGAGAACAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	45034177	45018128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_45018251_45018418_45018511_45018636_45018729_45024495_45024694_45025169_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029136_45033856
ENSMUSG00000074825.5_126982959_126985226_1	chr2	-	1344	2	FSM	ENSMUSG00000074825.5	ENST00000439118.3	1852	2	-23	531	0	-510	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGCAGCTTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	126985226	126982958	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_126984211_126985134
ENSMUSG00000074832.12_66579226_66579666_2	chr13	-	272	2	FSM	ENSMUSG00000074832.12	ENST00000244576.9	374	2	102	0	102	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCCTGTCACAATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	66579666	66579225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_66579385_66579553
ENSMUSG00000074832.12_66579226_66579666_3	chr13	-	262	2	NNC	ENSMUSG00000074832.12	novel	374	2	NA	NA	102	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCCTGTCACAATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	66579666	66579225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_66579383_66579561
ENSMUSG00000074852.5_42776193_42794875_1	chr19	-	1409	3	ISM	ENSMUSG00000074852.5	ENST00000404542.5	2280	10	206797	0	206797	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGAGGGACTTAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	42794875	42776192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_42776237_42776333_42777552_42794728
ENSMUSG00000074852.5_42776600_42897172_1	chr19	-	1360	4	ISM	ENSMUSG00000074852.5	ENST00000404542.5	2280	10	104500	407	104500	-407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACGGAAACATCAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	42897172	42776599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_42777552_42794728_42794876_42801318_42801465_42897057
ENSMUSG00000074852.5_42776703_42901617_1	chr19	-	1339	5	ISM	ENSMUSG00000074852.5	ENST00000404542.5	2280	10	100055	510	100055	-510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAATATTCACTGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	42901617	42776702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_42777552_42794728_42794876_42801318_42801465_42897057_42897173_42901535
ENSMUSG00000074852.5_42776827_42920069_1	chr19	-	1310	6	ISM	ENSMUSG00000074852.5	ENST00000404542.5	2280	10	81603	634	81603	-634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGGCATCCATCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	42920069	42776826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_42777552_42794728_42794876_42801318_42801465_42897057_42897173_42901535_42901643_42919999
ENSMUSG00000074852.5_42777122_43001531_1	chr19	-	1307	9	ISM	ENSMUSG00000074852.5	ENST00000404542.5	2280	10	141	929	141	-929	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGTTTGCAAACCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	43001531	42777121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_42777552_42794728_42794876_42801318_42801465_42897057_42897173_42901535_42901643_42919999_42920094_42955391_42955440_42979548_42979721_43001483
ENSMUSG00000074852.5_42777165_43001590_1	chr19	-	1323	9	ISM	ENSMUSG00000074852.5	ENST00000404542.5	2280	10	82	972	82	-972	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCTGTTTACGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	43001590	42777164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_42777552_42794728_42794876_42801318_42801465_42897057_42897173_42901535_42901643_42919999_42920094_42955391_42955440_42979548_42979721_43001483
ENSMUSG00000074852.5_42777197_43001611_1	chr19	-	1312	9	ISM	ENSMUSG00000074852.5	ENST00000404542.5	2280	10	61	1004	61	-1004	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCCGTAAGGAAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	43001611	42777196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_42777552_42794728_42794876_42801318_42801465_42897057_42897173_42901535_42901643_42919999_42920094_42955391_42955440_42979548_42979721_43001483
ENSMUSG00000074852.5_42777218_43001641_1	chr19	-	1321	9	ISM	ENSMUSG00000074852.5	ENST00000404542.5	2280	10	31	1025	31	-1025	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGTCTAGGTAGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	43001641	42777217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_42777552_42794728_42794876_42801318_42801465_42897057_42897173_42901535_42901643_42919999_42920094_42955391_42955440_42979548_42979721_43001483
ENSMUSG00000074884.13_121279676_121281642_1	chr2	+	797	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	0	2259	0	107	multi-exon	FALSE	canonical	NA	NA	NA	NA	1316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTAGACTTCATAAGG	NA	NA	NA	NA	NA	NA	NA	NA	121279675	121281642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_121279923_121280455_121280565_121281201
ENSMUSG00000074884.13_121279849_121281771_1	chr2	+	753	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	173	2130	-10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCCCCACACCGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	121279848	121281771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_121279923_121280455_121280565_121281201
ENSMUSG00000074884.13_121280456_121281251_1	chr2	+	182	2	ISM	ENSMUSG00000074884.13	ENSMUST00000099475.12	525	3	592	284	592	-284	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAACCCAAGTAGCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	121280455	121281251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_121280565_121281178
ENSMUSG00000074923.11_118493784_118519396_1	chr2	+	1030	4	ISM	ENSMUSG00000074923.11	ENSMUST00000099557.10	4411	11	0	9105	0	-9102	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGCAGAACATTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	118493783	118519396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118494505_118495263_118495348_118508203_118508310_118519277
ENSMUSG00000074923.11_118493784_118519450_1	chr2	+	1084	4	ISM	ENSMUSG00000074923.11	ENSMUST00000099557.10	4411	11	0	9051	0	-9048	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGAATCACACGGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	118493783	118519450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118494505_118495263_118495348_118508203_118508310_118519277
ENSMUSG00000074923.11_118494012_118520299_1	chr2	+	977	5	ISM	ENSMUSG00000074923.11	ENSMUST00000099557.10	4411	11	228	8202	228	-8199	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACACCCTGCGTGGACGC	NA	NA	NA	NA	NA	NA	NA	NA	118494011	118520299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118494505_118495263_118495348_118508203_118508310_118519277_118519487_118520214
ENSMUSG00000074923.11_118494243_118520583_1	chr2	+	1030	5	ISM	ENSMUSG00000074923.11	ENSMUST00000099557.10	4411	11	459	7918	459	-7915	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCAGCAGCTGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	118494242	118520583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118494505_118495263_118495348_118508203_118508310_118519277_118519487_118520214
ENSMUSG00000074923.11_118494417_118520704_1	chr2	+	977	5	ISM	ENSMUSG00000074923.11	ENSMUST00000099557.10	4411	11	633	7797	633	-7794	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGGTGGGCTCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	118494416	118520704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118494505_118495263_118495348_118508203_118508310_118519277_118519487_118520214
ENSMUSG00000074923.11_118495285_118520812_1	chr2	+	976	4	ISM	ENSMUSG00000074923.11	ENSMUST00000099557.10	4411	11	1501	7689	1501	-7686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTCCTGCCACAGGCGCG	NA	NA	NA	NA	NA	NA	NA	NA	118495284	118520812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118495348_118508203_118508310_118519277_118519487_118520214
ENSMUSG00000074923.11_118519332_118523877_1	chr2	+	982	3	ISM	ENSMUSG00000074923.11	ENST00000542403.3	2457	9	56	4621	56	-4621	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCGGTCTTCTCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	118519331	118523877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118519487_118520214_118520872_118523707
ENSMUSG00000074923.11_118519410_118523952_1	chr2	+	979	3	ISM	ENSMUSG00000074923.11	ENST00000542403.3	2457	9	134	4546	134	-4546	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCCCACAGTGGCCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	118519409	118523952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118519487_118520214_118520872_118523707
ENSMUSG00000074923.11_118520555_118524821_1	chr2	+	996	4	ISM	ENSMUSG00000074923.11	ENST00000542403.3	2457	9	1279	3677	1279	-3677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGCTTACCTGCACGCC	NA	NA	NA	NA	NA	NA	NA	NA	118520554	118524821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118520872_118523707_118524206_118524347_118524482_118524774
ENSMUSG00000074923.11_118520720_118525070_1	chr2	+	986	5	ISM	ENSMUSG00000074923.11	ENST00000542403.3	2457	9	1444	3428	1444	-3428	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATACTGGATGGCTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	118520719	118525070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118520872_118523707_118524206_118524347_118524482_118524774_118524902_118524995
ENSMUSG00000074923.11_118520839_118526933_1	chr2	+	964	6	ISM	ENSMUSG00000074923.11	ENST00000455577.6	4277	10	27059	1565	1563	-1565	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCAAGAGCGAGCCACG	NA	NA	NA	NA	NA	NA	NA	NA	118520838	118526933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118520872_118523707_118524206_118524347_118524482_118524774_118524902_118524995_118525122_118526887
ENSMUSG00000074923.11_118523804_118527079_1	chr2	+	981	5	ISM	ENSMUSG00000074923.11	ENST00000455577.6	4277	10	30024	1419	4528	-1419	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTGCCCACAGGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	118523803	118527079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118524206_118524347_118524482_118524774_118524902_118524995_118525122_118526887
ENSMUSG00000074923.11_118523992_118527293_1	chr2	+	1007	5	ISM	ENSMUSG00000074923.11	ENST00000455577.6	4277	10	30212	1205	4716	-1205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCCTTTGTTATTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	118523991	118527293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118524206_118524347_118524482_118524774_118524902_118524995_118525122_118526887
ENSMUSG00000074923.11_118524078_118526914_1	chr2	+	677	6	ISM	ENSMUSG00000074923.11	ENST00000542403.3	2457	9	4802	1584	4802	-1584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGATGCTGGTACGGGA	NA	NA	NA	NA	NA	NA	NA	NA	118524077	118526914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118524206_118524347_118524482_118524774_118524902_118524995_118525122_118525687_118525823_118526887
ENSMUSG00000074923.11_118524120_118527428_1	chr2	+	1014	5	ISM	ENSMUSG00000074923.11	ENST00000455577.6	4277	10	30340	1070	4844	-1070	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGCATGCTCCATCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	118524119	118527428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118524206_118524347_118524482_118524774_118524902_118524995_118525122_118526887
ENSMUSG00000074923.11_118524145_118526969_1	chr2	+	665	6	ISM	ENSMUSG00000074923.11	ENST00000542403.3	2457	9	4869	1529	4869	-1529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCCGTTTCTGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	118524144	118526969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118524206_118524347_118524482_118524774_118524902_118524995_118525122_118525687_118525823_118526887
ENSMUSG00000074923.11_118524772_118528174_1	chr2	+	636	5	ISM	ENSMUSG00000074923.11	ENST00000542403.3	2457	9	5496	324	5496	-324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGCACCTCCTCTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	118524771	118528174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118524902_118524995_118525122_118525687_118525823_118526887_118527069_118528110
ENSMUSG00000074923.11_118524811_118528243_1	chr2	+	666	5	ISM	ENSMUSG00000074923.11	ENST00000542403.3	2457	9	5535	255	5535	-255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTTCCCACCTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	118524810	118528243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118524902_118524995_118525122_118525687_118525823_118526887_118527069_118528110
ENSMUSG00000074923.11_118524856_118528309_1	chr2	+	687	5	ISM	ENSMUSG00000074923.11	ENST00000542403.3	2457	9	5580	189	5580	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGATCCAGATAATATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	118524855	118528309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118524902_118524995_118525122_118525687_118525823_118526887_118527069_118528110
ENSMUSG00000074923.11_118525089_118528499_1	chr2	+	738	4	ISM	ENSMUSG00000074923.11	ENST00000542403.3	2457	9	5813	-1	5813	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGGGTTTTTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	118525088	118528499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_118525122_118525687_118525823_118526887_118527069_118528110
ENSMUSG00000074934.4_113577613_113588991_1	chr2	-	3044	2	FSM	ENSMUSG00000074934.4	ENSMUST00000099575.4	4148	2	0	1104	0	-1104	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAACTTCTTTGAAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	113588991	113577612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_113580501_113588835
ENSMUSG00000075000.12_67102468_67120959_1	chr10	-	1603	3	FSM	ENSMUSG00000075000.12	ENST00000435510.6	1613	3	5	5	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTGAGTATGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	67120959	67102467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_67103946_67105884_67105926_67120875
ENSMUSG00000075000.12_67102604_67111412_1	chr10	-	1447	3	ISM	ENSMUSG00000075000.12	ENSMUST00000077839.13	1813	4	9672	136	9547	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACTTTGTGTTATATGA	NA	NA	NA	NA	NA	NA	NA	NA	67111412	67102603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_67103946_67105884_67105926_67111348
ENSMUSG00000075000.12_67102717_67120959_1	chr10	-	1439	4	FSM	ENSMUSG00000075000.12	ENSMUST00000077839.13	1813	4	125	249	0	-249	multi-exon	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTATCAGGAGAAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	67120959	67102716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_67103946_67105884_67105926_67111348_67111434_67120875
ENSMUSG00000075000.12_67102753_67121010_1	chr10	-	1454	4	FSM	ENSMUSG00000075000.12	ENSMUST00000077839.13	1813	4	74	285	-46	-285	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTTTGCACTACTCGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	67121010	67102752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_67103946_67105884_67105926_67111348_67111434_67120875
ENSMUSG00000075000.12_67102810_67121084_1	chr10	-	1471	4	FSM	ENSMUSG00000075000.12	ENSMUST00000077839.13	1813	4	0	342	0	-342	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTGAGATGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	67121084	67102809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_67103946_67105884_67105926_67111348_67111434_67120875
ENSMUSG00000075014.2_98496892_98497385_1	chr2	-	429	2	NNC	ENSMUSG00000075014.2	novel	660	5	NA	NA	261	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGTAGGTACACACACAA	NA	NA	NA	NA	NA	NA	NA	NA	98497385	98496891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_98497017_98497081
ENSMUSG00000075014.2_98496892_98497385_2	chr2	-	428	2	NNC	ENSMUSG00000075014.2	novel	660	5	NA	NA	261	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGTAGGTACACACACAA	NA	NA	NA	NA	NA	NA	NA	NA	98497385	98496891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_98497017_98497082
ENSMUSG00000075014.2_98496892_98497514_1	chr2	-	533	3	NNC	ENSMUSG00000075014.2	novel	660	5	NA	NA	132	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGTAGGTACACACACAA	NA	NA	NA	NA	NA	NA	NA	NA	98497514	98496891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_98497017_98497081_98497380_98497404
ENSMUSG00000075014.2_98497079_98497646_1	chr2	-	544	2	NNC	ENSMUSG00000075014.2	novel	660	5	NA	NA	0	-187	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTCCTCGCCATATTT	NA	NA	NA	NA	NA	NA	NA	NA	98497646	98497078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_98497381_98497404
ENSMUSG00000075023.12_93687063_93692217_1	chr2	-	845	7	ISM	ENSMUSG00000075023.12	ENST00000378832.1	979	9	1297	-2	1297	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACCTTCACCTACAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	93692217	93687062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689784_93691357_93691463_93692024
ENSMUSG00000075023.12_93687115_93693189_1	chr2	-	846	8	ISM	ENSMUSG00000075023.12	ENST00000378832.1	979	9	325	50	325	-50	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCCTACATGTGTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	93693189	93687114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689784_93691357_93691463_93692024_93692217_93693135
ENSMUSG00000075023.12_93687290_93693486_1	chr2	-	820	8	ISM	ENSMUSG00000075023.12	ENST00000378832.1	979	9	28	225	28	-225	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTCTGCAAACAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	93693486	93687289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_93687433_93688239_93688382_93688481_93688528_93689700_93689784_93691357_93691463_93692024_93692217_93693135_93693203_93693444
ENSMUSG00000075033.5_55663702_55686796_1	chr16	-	2307	4	ISM	ENSMUSG00000075033.5	ENST00000491511.6	2471	5	28557	0	28557	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACTCTCAGAAAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55686796	55663701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_55665090_55669974_55670182_55680668_55680743_55686158
ENSMUSG00000075033.5_55663702_55686913_1	chr16	-	2424	4	ISM	ENSMUSG00000075033.5	ENST00000491511.6	2471	5	28440	0	28440	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACTCTCAGAAAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55686913	55663701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_55665090_55669974_55670182_55680668_55680743_55686158
ENSMUSG00000075033.5_55663781_55715335_1	chr16	-	2374	5	FSM	ENSMUSG00000075033.5	ENST00000491511.6	2471	5	18	79	18	-79	multi-exon	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGACTGTGTAAATAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	55715335	55663780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_55665090_55669974_55670182_55680668_55680743_55686158_55686914_55715306
ENSMUSG00000075054.6_18161301_18166297_1	chr13	-	3152	2	ISM	ENSMUSG00000075054.6	ENSMUST00000222796.2	1382	3	1391	-2119	1391	2119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACTTAATTTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	18166297	18161300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_18164368_18166212
ENSMUSG00000075122.6_38279480_38315108_1	chr16	+	1291	6	ISM	ENSMUSG00000075122.6	ENSMUST00000231716.2	3173	7	3557	1589	0	-1589	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACACACTCTCTCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	38279479	38315108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_38279652_38294227_38294546_38299425_38299708_38302981_38303096_38306665_38306810_38314847
ENSMUSG00000075122.6_38279480_38315232_1	chr16	+	1415	6	ISM	ENSMUSG00000075122.6	ENSMUST00000231716.2	3173	7	3557	1465	0	-1465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGACTTCCAGGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	38279479	38315232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_38279652_38294227_38294546_38299425_38299708_38302981_38303096_38306665_38306810_38314847
ENSMUSG00000075122.6_38294348_38315462_1	chr16	+	1353	5	ISM	ENSMUSG00000075122.6	ENSMUST00000231716.2	3173	7	18425	1235	14868	-1235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCTTACTGGCAATATT	NA	NA	NA	NA	NA	NA	NA	NA	38294347	38315462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_38294546_38299425_38299708_38302981_38303096_38306665_38306810_38314847
ENSMUSG00000075232.7_40164530_40166207_1	chr10	-	1030	2	ISM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	11975	1076	11975	-1076	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATAAATGACAAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	40166207	40164529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_40165466_40166113
ENSMUSG00000075232.7_40164821_40166215_1	chr10	-	747	2	ISM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	11967	1367	11967	-1367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCATACAGGTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	40166215	40164820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_40165466_40166113
ENSMUSG00000075232.7_40165054_40170244_1	chr10	-	1020	6	ISM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	7938	1600	7938	-1600	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTATGAATCTTTACGAC	NA	NA	NA	NA	NA	NA	NA	NA	40170244	40165053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176
ENSMUSG00000075232.7_40165320_40177830_1	chr10	-	986	8	FSM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	352	1866	352	-1866	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATGAAGAAGAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	40177830	40165319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ENSMUSG00000075232.7_40165320_40177892_1	chr10	-	1048	8	FSM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	290	1866	290	-1866	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATGAAGAAGAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	40177892	40165319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ENSMUSG00000075232.7_40166214_40178182_1	chr10	-	1092	7	ISM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	0	2760	0	-2760	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAACAAACCTAAGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	40178182	40166213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ENSMUSG00000075249.13_82822686_82823198_1	chr2	+	393	2	ISM	ENSMUSG00000075249.13	ENST00000611759.1	3275	4	1125	6996	1125	-6996	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACATTCAATACAAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	82822685	82823198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_82822932_82823051
ENSMUSG00000075249.13_82822756_82823231_1	chr2	+	356	2	ISM	ENSMUSG00000075249.13	ENST00000611759.1	3275	4	1195	6963	1195	-6963	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAAAGTTGTACAACC	NA	NA	NA	NA	NA	NA	NA	NA	82822755	82823231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_82822932_82823051
ENSMUSG00000075249.13_82822832_82823322_1	chr2	+	371	2	ISM	ENSMUSG00000075249.13	ENST00000611759.1	3275	4	1271	6872	1271	-6872	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCTTTTGAAACACTGT	NA	NA	NA	NA	NA	NA	NA	NA	82822831	82823322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_82822932_82823051
ENSMUSG00000075249.13_82824087_82828378_1	chr2	+	356	2	ISM	ENSMUSG00000075249.13	ENST00000611759.1	3275	4	2526	1816	2526	-1816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAACAAAACAGATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	82824086	82828378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_82824372_82828307
ENSMUSG00000075249.13_82824180_82828502_1	chr2	+	387	2	ISM	ENSMUSG00000075249.13	ENST00000611759.1	3275	4	2619	1692	2619	-1692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGACCAGTGCTTAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	82824179	82828502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_82824372_82828307
ENSMUSG00000075249.13_82824248_82828539_1	chr2	+	356	2	ISM	ENSMUSG00000075249.13	ENST00000611759.1	3275	4	2687	1655	2687	-1655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCAACAAGTAAAAAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	82824247	82828539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_82824372_82828307
ENSMUSG00000075249.13_82828493_82830138_1	chr2	+	343	2	ISM	ENSMUSG00000075249.13	ENST00000611759.1	3275	4	6932	56	6932	-56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTCATACACAGAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	82828492	82830138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_82828803_82830105
ENSMUSG00000075249.13_82828542_82830193_1	chr2	+	349	2	ISM	ENSMUSG00000075249.13	ENST00000611759.1	3275	4	6981	1	6981	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGGTATATAAAATTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	82828541	82830193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_82828803_82830105
ENSMUSG00000075256.10_79162874_79259235_1	chr2	-	1599	11	FSM	ENSMUSG00000075256.10	ENST00000410087.8	1520	11	-79	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGATATATACAAATAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	79259235	79162873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_79163001_79163822_79164002_79168884_79168982_79171636_79171746_79172578_79172825_79173560_79173636_79185265_79185409_79191667_79191732_79199023_79199156_79223286_79223520_79259041
ENSMUSG00000075266.6_30072158_30074492_1	chr10	-	1096	2	ISM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	2064	153	1996	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATGAATGATTGTAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	30074492	30072157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_30073223_30074461
ENSMUSG00000075266.6_30072206_30074546_1	chr10	-	1102	2	ISM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	2010	201	1942	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCATTTTGATTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	30074546	30072205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_30073223_30074461
ENSMUSG00000075266.6_30072346_30076488_1	chr10	-	1123	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	68	341	0	-341	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAATGGAAGCATGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	30076488	30072345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_30073223_30074461_30074576_30076356
ENSMUSG00000075266.6_30072346_30076556_1	chr10	-	1191	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	0	341	0	-341	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAATGGAAGCATGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	30076556	30072345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_30073223_30074461_30074576_30076356
ENSMUSG00000075307.4_69501076_69505040_1	chr2	+	807	3	ISM	ENSMUSG00000075307.4	ENSMUST00000100050.4	2529	6	612	9534	612	-9534	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATACTGTCTAGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	69501075	69505040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_69501651_69504701_69504860_69504966
ENSMUSG00000075307.4_69501184_69508492_1	chr2	+	802	4	ISM	ENSMUSG00000075307.4	ENSMUST00000100050.4	2529	6	720	6082	720	-6082	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTCGTTCCATGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	69501183	69508492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_69501651_69504701_69504860_69504966_69505075_69508423
ENSMUSG00000075307.4_69501556_69513936_1	chr2	+	799	6	FSM	ENSMUSG00000075307.4	ENSMUST00000100050.4	2529	6	1092	638	1092	-638	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTATAAAGGAGGTGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	69501555	69513936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_69501651_69504701_69504860_69504966_69505075_69508423_69508610_69510027_69510175_69513831
ENSMUSG00000075307.4_69504996_69514229_1	chr2	+	810	4	ISM	ENSMUSG00000075307.4	ENSMUST00000100050.4	2529	6	4532	345	4532	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGACCAGGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	69504995	69514229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_69505075_69508423_69508610_69510027_69510175_69513831
ENSMUSG00000075307.4_69508440_69514335_1	chr2	+	821	3	ISM	ENSMUSG00000075307.4	ENSMUST00000100050.4	2529	6	7976	239	7976	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAACCTTTCTCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	69508439	69514335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_69508610_69510027_69510175_69513831
ENSMUSG00000075307.4_69510092_69514574_1	chr2	+	826	2	ISM	ENSMUSG00000075307.4	ENSMUST00000100050.4	2529	6	9628	0	9628	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCCCATTCTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	69510091	69514574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_69510175_69513831
ENSMUSG00000075316.12_66314349_66363569_1	chr2	-	2658	12	NNC	ENSMUSG00000075316.12	novel	5952	26	NA	NA	35039	-584	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCACCCAGTTCATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	66363569	66314348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_66314949_66317718_66317990_66318325_66318424_66323418_66323561_66324229_66324284_66324952_66325235_66331956_66332080_66335192_66335367_66338863_66339019_66345658_66345777_66356951_66357429_66363405
ENSMUSG00000075316.12_66317955_66338910_1	chr2	-	832	7	NNC	ENSMUSG00000075316.12	novel	6000	25	NA	NA	59698	-4190	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAGCTTTTGATATCA	NA	NA	NA	NA	NA	NA	NA	NA	66338910	66317954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_66317990_66318325_66318424_66323418_66323561_66324229_66324284_66324952_66325235_66335192_66335367_66338863
ENSMUSG00000075316.12_66323423_66345778_1	chr2	-	923	6	ISM	ENSMUSG00000075316.12	ENST00000644316.1	6000	25	52830	9862	52830	-9658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTATTTTAAGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	66345778	66323422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66323561_66324229_66324284_66324952_66325235_66335192_66335367_66338863_66339019_66345658
ENSMUSG00000075316.12_66323426_66370843_1	chr2	-	2654	13	ISM	ENSMUSG00000075316.12	ENST00000409435.6	5952	26	27765	9661	27765	-9661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAAGTATTTTAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	66370843	66323425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66323561_66324229_66324284_66324952_66325235_66331956_66332080_66335192_66335367_66338863_66339019_66345658_66345777_66356951_66357429_66363405_66363763_66364457_66364632_66366441_66366681_66367613_66367744_66370607
ENSMUSG00000075316.12_66323486_66370888_1	chr2	-	2639	13	ISM	ENSMUSG00000075316.12	ENST00000409435.6	5952	26	27720	9721	27720	-9721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCACTTTGAACTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	66370888	66323485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66323561_66324229_66324284_66324952_66325235_66331956_66332080_66335192_66335367_66338863_66339019_66345658_66345777_66356951_66357429_66363405_66363763_66364457_66364632_66366441_66366681_66367613_66367744_66370607
ENSMUSG00000075316.12_66325085_66373547_1	chr2	-	2638	12	ISM	ENSMUSG00000075316.12	ENST00000409435.6	5952	26	25061	11320	25061	-11320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTATCTCAAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	66373547	66325084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66325235_66331956_66332080_66335192_66335367_66338863_66339019_66345658_66345777_66356951_66357429_66363405_66363763_66364457_66364632_66366441_66366681_66367613_66367744_66370607_66370980_66373378
ENSMUSG00000075316.12_66325120_66357221_1	chr2	-	832	5	ISM	ENSMUSG00000075316.12	ENST00000644316.1	6000	25	41387	11559	41387	-11355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGAGTGTGTTAACACC	NA	NA	NA	NA	NA	NA	NA	NA	66357221	66325119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66325235_66335192_66335367_66338863_66339019_66345658_66345777_66356951
ENSMUSG00000075316.12_66325170_66357286_1	chr2	-	847	5	ISM	ENSMUSG00000075316.12	ENST00000644316.1	6000	25	41322	11609	41322	-11405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGGCTAATATTTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	66357286	66325169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66325235_66335192_66335367_66338863_66339019_66345658_66345777_66356951
ENSMUSG00000075316.12_66331954_66377403_1	chr2	-	2644	12	ISM	ENSMUSG00000075316.12	ENST00000409435.6	5952	26	21205	18189	21205	-18189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATACCAAACTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	66377403	66331953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66332080_66335192_66335367_66338863_66339019_66345658_66345777_66356951_66357429_66363405_66363763_66364457_66364632_66366441_66366681_66367613_66367744_66370607_66370980_66373378_66373664_66377366
ENSMUSG00000075316.12_66331993_66377474_1	chr2	-	2676	12	ISM	ENSMUSG00000075316.12	ENST00000409435.6	5952	26	21134	18228	21134	-18228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAAGAGCTTTGTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	66377474	66331992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66332080_66335192_66335367_66338863_66339019_66345658_66345777_66356951_66357429_66363405_66363763_66364457_66364632_66366441_66366681_66367613_66367744_66370607_66370980_66373378_66373664_66377366
ENSMUSG00000075316.12_66335307_66379386_1	chr2	-	2637	12	ISM	ENSMUSG00000075316.12	ENST00000409435.6	5952	26	19222	21542	19222	-21542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGATATTCACCTACAT	NA	NA	NA	NA	NA	NA	NA	NA	66379386	66335306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66335367_66338863_66339019_66345658_66345777_66356951_66357429_66363405_66363763_66364457_66364632_66366441_66366681_66367613_66367744_66370607_66370980_66373378_66373664_66377366_66377574_66379323
ENSMUSG00000075316.12_66338863_66380747_1	chr2	-	2721	12	ISM	ENSMUSG00000075316.12	ENST00000409435.6	5952	26	17861	25098	17861	-25098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAGCTGATAAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	66380747	66338862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66339019_66345658_66345777_66356951_66357429_66363405_66363763_66364457_66364632_66366441_66366681_66367613_66367744_66370607_66370980_66373378_66373664_66377366_66377574_66379323_66379466_66380683
ENSMUSG00000075316.12_66357093_66395508_1	chr2	-	2673	13	ISM	ENSMUSG00000075316.12	ENST00000409435.6	5952	26	3100	43328	3100	-43328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGATGAAAACGATTACCA	NA	NA	NA	NA	NA	NA	NA	NA	66395508	66357092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66357429_66363405_66363763_66364457_66364632_66366441_66366681_66367613_66367744_66370607_66370980_66373378_66373664_66377366_66377574_66379323_66379466_66380683_66380748_66392689_66392903_66393679_66393772_66395446
ENSMUSG00000075316.12_66363459_66398440_1	chr2	-	2651	15	NNC	ENSMUSG00000075316.12	novel	5952	26	NA	NA	168	-49694	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	381	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCATGTGCCTTATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	66398440	66363458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_66363763_66364457_66364632_66366441_66366681_66367613_66367744_66370607_66370980_66373378_66373664_66377366_66377574_66379323_66379466_66380683_66380748_66392689_66392903_66393679_66393772_66395446_66395576_66396121_66396216_66396517_66396634_66398350
ENSMUSG00000075316.12_66363515_66370679_1	chr2	-	830	5	ISM	ENSMUSG00000075316.12	ENST00000644316.1	6000	25	27929	49954	27929	-49750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGTGGGGAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	66370679	66363514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66363763_66364457_66364632_66366441_66366681_66367613_66367744_66370640
ENSMUSG00000075316.12_66363562_66398543_1	chr2	-	2651	15	NNC	ENSMUSG00000075316.12	novel	5952	26	NA	NA	65	-49797	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	359	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGGCACATGAACGACTT	NA	NA	NA	NA	NA	NA	NA	NA	66398543	66363561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_66363763_66364457_66364632_66366441_66366681_66367613_66367744_66370607_66370980_66373378_66373664_66377366_66377574_66379323_66379466_66380683_66380748_66392689_66392903_66393679_66393772_66395446_66395576_66396121_66396216_66396517_66396634_66398350
ENSMUSG00000075316.12_66363578_66370735_1	chr2	-	823	5	ISM	ENSMUSG00000075316.12	ENST00000644316.1	6000	25	27873	50017	27873	-49813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGCAAGCTCCCACGCT	NA	NA	NA	NA	NA	NA	NA	NA	66370735	66363577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66363763_66364457_66364632_66366441_66366681_66367613_66367744_66370640
ENSMUSG00000075316.12_66363674_66370874_1	chr2	-	866	5	ISM	ENSMUSG00000075316.12	ENST00000644316.1	6000	25	27734	50113	27734	-49909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGGTGCTGGCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	66370874	66363673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66363763_66364457_66364632_66366441_66366681_66367613_66367744_66370640
ENSMUSG00000075316.12_66364458_66370979_1	chr2	-	882	4	ISM	ENSMUSG00000075316.12	ENST00000644316.1	6000	25	27629	50897	27629	-50693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGCAGAAGCTAAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	66370979	66364457	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66364632_66366441_66366681_66367613_66367744_66370640
ENSMUSG00000075316.12_66364573_66373519_1	chr2	-	908	5	ISM	ENSMUSG00000075316.12	ENST00000644316.1	6000	25	25089	51012	25089	-50808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATTTCCAAGTAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	66373519	66364572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66364632_66366441_66366681_66367613_66367744_66370640_66370980_66373378
ENSMUSG00000075316.12_66367652_66377476_1	chr2	-	826	4	ISM	ENSMUSG00000075316.12	ENST00000644316.1	6000	25	21132	54091	21132	-53887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGCAGAGCAAGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	66377476	66367651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66367744_66370640_66370980_66373378_66373664_66377366
ENSMUSG00000075316.12_66370887_66392778_1	chr2	-	880	6	ISM	ENSMUSG00000075316.12	ENST00000409435.6	5952	26	5830	57122	5830	-57122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAACGGAATTTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	66392778	66370886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_66370980_66373378_66373664_66377366_66377574_66379323_66379466_66380683_66380748_66392689
ENSMUSG00000075324.14_63792906_63928342_1	chr2	-	721	3	FSM	ENSMUSG00000075324.14	ENST00000409634.5	739	3	18	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGCAGAAACAGGAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	63928342	63792905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_63793300_63927238_63927409_63928185
ENSMUSG00000075467.5_26240214_26241408_1	chr2	-	419	2	ISM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	714	2081	714	-2081	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTGGCTTCGGGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	26241408	26240213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26240571_26241346
ENSMUSG00000075467.5_26240278_26241447_1	chr2	-	394	2	ISM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	675	2145	675	-2145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGAAGTCAGAACAACTC	NA	NA	NA	NA	NA	NA	NA	NA	26241447	26240277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_26240571_26241346
ENSMUSG00000075467.5_26240407_26241876_1	chr2	-	396	3	FSM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	246	2274	246	-2274	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACAGCTGCAGACTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	26241876	26240406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26240571_26241346_26241487_26241784
ENSMUSG00000075467.5_26240481_26241952_1	chr2	-	398	3	FSM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	170	2348	170	-2348	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCCTGACACCCCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	26241952	26240480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26240571_26241346_26241487_26241784
ENSMUSG00000075486.11_101871747_101877887_1	chr14	-	298	3	FSM	ENSMUSG00000075486.11	ENSMUST00000168587.3	519	3	6	215	6	-215	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCTTCCAAATGAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	101877887	101871746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_101871829_101874389_101874543_101877824
ENSMUSG00000075528.14_101297665_101308441_1	chr11	-	1511	12	NNC	ENSMUSG00000075528.14	novel	1516	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTATACTGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	101308441	101297664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_101297851_101298956_101299052_101300478_101300529_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
ENSMUSG00000075528.14_101297665_101308441_2	chr11	-	1511	12	NNC	ENSMUSG00000075528.14	novel	1516	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTATACTGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	101308441	101297664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302021_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
ENSMUSG00000075528.14_101297665_101308441_3	chr11	-	1510	12	NNC	ENSMUSG00000075528.14	novel	1516	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	835	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTATACTGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	101308441	101297664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302771_101302824_101304762_101304923_101307928_101308061_101308175
ENSMUSG00000075602.11_74866727_74868419_1	chr15	-	721	2	ISM	ENSMUSG00000075602.11	ENSMUST00000023248.13	819	3	1064	0	1064	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGTTCTCCATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	74868419	74866726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_74867329_74868300
ENSMUSG00000075602.11_74867174_74869836_1	chr15	-	464	4	FSM	ENSMUSG00000075602.11	ENSMUST00000187994.7	955	4	44	447	0	-374	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCATGGCAGGGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	74869836	74867173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_74867329_74868300_74868418_74869383_74869467_74869727
ENSMUSG00000075602.11_74867251_74869756_1	chr15	-	338	4	FSM	ENSMUSG00000075602.11	ENSMUST00000186526.7	862	4	21	503	0	-451	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTAAGGTCAACGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	74869756	74867250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_74867329_74868300_74868418_74869383_74869467_74869696
ENSMUSG00000075602.11_74868383_74869756_1	chr15	-	193	3	ISM	ENSMUSG00000075602.11	ENSMUST00000189068.7	878	4	0	1657	0	-1583	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTGAGACTTCTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	74869756	74868382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_74868418_74869383_74869482_74869696
ENSMUSG00000075700.11_58484278_58495892_1	chr3	+	454	4	ISM	ENSMUSG00000075700.11	ENST00000485923.1	1019	6	147	2425	147	-2425	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGCAACATGATTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	58484277	58495892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_58484468_58492651_58492763_58493372_58493500_58495866
ENSMUSG00000075700.11_58484420_58497634_1	chr3	+	421	5	ISM	ENSMUSG00000075700.11	ENST00000485923.1	1019	6	289	683	289	-683	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAACTTGTTCAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	58484419	58497634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_58484468_58492651_58492763_58493372_58493500_58495866_58495955_58497587
ENSMUSG00000075701.11_65729397_65738758_1	chr7	+	796	6	FSM	ENSMUSG00000075701.11	ENSMUST00000101801.8	1191	6	0	395	0	-177	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTGCCATTAGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	65729396	65738758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737020_65738514
ENSMUSG00000075701.11_65729435_65738868_1	chr7	+	868	6	FSM	ENSMUSG00000075701.11	ENSMUST00000101801.8	1191	6	38	285	9	-67	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGATGATACTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	65729434	65738868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737020_65738514
ENSMUSG00000075701.11_65729435_65738877_1	chr7	+	877	6	FSM	ENSMUSG00000075701.11	ENSMUST00000101801.8	1191	6	38	276	9	-58	multi-exon	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTTTGGGGTAGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	65729434	65738877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737020_65738514
ENSMUSG00000075701.11_65733147_65739153_1	chr7	+	916	4	ISM	ENSMUSG00000075701.11	ENSMUST00000206044.2	911	6	3438	-218	3438	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCTGGTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	65733146	65739153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_65733255_65736694_65736785_65736940_65737020_65738514
ENSMUSG00000075701.11_65736693_65739153_1	chr7	+	810	3	ISM	ENSMUSG00000075701.11	ENSMUST00000206044.2	911	6	6984	-218	6984	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCTGGTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	65736692	65739153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_65736785_65736940_65737020_65738514
ENSMUSG00000075702.11_3464867_3467130_1	chr11	+	470	4	NNC	ENSMUSG00000075702.11	novel	707	5	NA	NA	0	-221	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGCTTCAGAACACGA	NA	NA	NA	NA	NA	NA	NA	NA	3464866	3467130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_3465074_3466260_3466316_3466841_3466921_3467001
ENSMUSG00000075702.11_3464867_3467144_1	chr11	+	500	5	FSM	ENSMUSG00000075702.11	ENSMUST00000094469.6	707	5	0	207	0	-207	multi-exon	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGACGACCTGTAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	3464866	3467144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_3465074_3466260_3466297_3466485_3466521_3466841_3466921_3467001
ENSMUSG00000075702.11_3464867_3467156_1	chr11	+	506	5	NNC	ENSMUSG00000075702.11	novel	707	5	NA	NA	0	-195	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCCCCGAGCCACAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	3464866	3467156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_3465074_3466260_3466297_3466491_3466521_3466841_3466921_3467001
ENSMUSG00000075702.11_3464979_3467180_1	chr11	+	418	5	NNC	ENSMUSG00000075702.11	novel	707	5	NA	NA	112	-171	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCCCCCCCTGCCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	3464978	3467180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_3465074_3466260_3466297_3466491_3466521_3466841_3466921_3467001
ENSMUSG00000075702.11_3465035_3467232_1	chr11	+	414	5	NNC	ENSMUSG00000075702.11	novel	707	5	NA	NA	168	-119	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGCATCTCCCTTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	3465034	3467232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_3465074_3466260_3466297_3466491_3466521_3466841_3466921_3467001
ENSMUSG00000075702.11_3466259_3467351_1	chr11	+	486	3	NNC	ENSMUSG00000075702.11	novel	707	5	NA	NA	1392	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGAGTCTCTTCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	3466258	3467351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_3466316_3466841_3466921_3467001
ENSMUSG00000075702.11_3466259_3467351_2	chr11	+	502	4	ISM	ENSMUSG00000075702.11	ENSMUST00000094469.6	707	5	1392	0	1392	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGAGTCTCTTCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	3466258	3467351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_3466297_3466485_3466521_3466841_3466921_3467001
ENSMUSG00000075704.18_18245134_18297823_2	chr16	+	1931	17	NIC	ENSMUSG00000075704.18	novel	1905	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCGTGTGCTGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	18245133	18297823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262025_18273225_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
ENSMUSG00000075704.18_18245212_18297820_1	chr16	+	1849	17	NIC	ENSMUSG00000075704.18	novel	1905	18	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTCTGCGTGTGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	18245211	18297820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262037_18273238_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
ENSMUSG00000075704.18_18256284_18287513_1	chr16	+	707	8	ISM	ENSMUSG00000075704.18	ENST00000400518.5	1391	13	34	9055	34	-9055	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGACTTTGAATCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	18256283	18287513	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262037_18273225_18273331_18274773_18274949_18287499
ENSMUSG00000075704.18_18256332_18287570_1	chr16	+	716	8	ISM	ENSMUSG00000075704.18	ENST00000400518.5	1391	13	82	8998	82	-8998	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTGTGGATGCCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	18256331	18287570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262037_18273225_18273331_18274773_18274949_18287499
ENSMUSG00000075704.18_18256368_18287637_1	chr16	+	747	8	ISM	ENSMUSG00000075704.18	ENST00000400518.5	1391	13	118	8931	118	-8931	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTCTATGTCTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	18256367	18287637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262037_18273225_18273331_18274773_18274949_18287499
ENSMUSG00000075704.18_18257063_18291001_1	chr16	+	821	8	ISM	ENSMUSG00000075704.18	ENST00000400518.5	1391	13	813	5567	813	-5567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCCTTTAAAGGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	18257062	18291001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18257144_18259542_18259622_18260497_18260561_18261953_18262037_18273225_18273331_18274773_18274949_18287499_18287637_18290903
ENSMUSG00000075704.18_18260497_18291638_1	chr16	+	755	7	ISM	ENSMUSG00000075704.18	ENST00000400518.5	1391	13	4247	4930	4247	-4930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAACTCTCCTCCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	18260496	18291638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18260561_18261953_18262037_18273225_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543
ENSMUSG00000075704.18_18261954_18293503_1	chr16	+	761	7	ISM	ENSMUSG00000075704.18	ENST00000400518.5	1391	13	5704	3065	5704	-3065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGTTTAGGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	18261953	18293503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18262037_18273225_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431
ENSMUSG00000075704.18_18262019_18294288_1	chr16	+	713	8	ISM	ENSMUSG00000075704.18	ENST00000400518.5	1391	13	5769	2280	5769	-2280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCCACAACTGGTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	18262018	18294288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18262037_18273225_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271
ENSMUSG00000075704.18_18273225_18294369_1	chr16	+	777	7	ISM	ENSMUSG00000075704.18	ENST00000400518.5	1391	13	16975	2199	16975	-2199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCCTATAGAATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	18273224	18294369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271
ENSMUSG00000075706.12_79889322_79890953_1	chr10	+	614	4	NNC	ENSMUSG00000075706.12	novel	959	7	NA	NA	0	-1275	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGCCCTGGGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	79889321	79890953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_79889550_79890347_79890437_79890533_79890679_79890801
ENSMUSG00000075706.12_79889322_79891781_1	chr10	+	645	5	ISM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	0	492	0	-447	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGCATACAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	79889321	79891781	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756
ENSMUSG00000075706.12_79889445_79891935_1	chr10	+	587	5	NNC	ENSMUSG00000075706.12	novel	809	6	NA	NA	11	-293	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTACCTTTGCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	79889444	79891935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891845
ENSMUSG00000075706.12_79889445_79892273_1	chr10	+	811	6	FSM	ENSMUSG00000075706.12	ENST00000589115.6	809	6	11	-13	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	79889444	79892273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891873_79891934_79892019
ENSMUSG00000075706.12_79889492_79892066_1	chr10	+	582	7	FSM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	170	207	58	-162	multi-exon	FALSE	canonical	NA	NA	NA	NA	1663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCCCCTACACCGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	79889491	79892066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ENSMUSG00000075706.12_79889510_79892199_1	chr10	+	697	7	FSM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	188	74	76	-29	multi-exon	FALSE	canonical	NA	NA	NA	NA	3791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCCAGAGGCCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	79889509	79892199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ENSMUSG00000076432.14_21440330_21467326_1	chr12	-	1999	5	FSM	ENSMUSG00000076432.14	ENSMUST00000103002.8	2110	5	111	0	111	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATGGCTTTGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	21467326	21440329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798
ENSMUSG00000076432.14_21441222_21446344_1	chr12	-	353	3	ISM	ENSMUSG00000076432.14	ENSMUST00000103002.8	2110	5	21093	892	21093	-889	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGCTTTGGGAAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	21446344	21441221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_21441417_21444965_21445062_21446282
ENSMUSG00000076432.14_21441270_21446397_1	chr12	-	358	3	ISM	ENSMUSG00000076432.14	ENSMUST00000103002.8	2110	5	21040	940	21040	-937	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCATTCGTGTGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	21446397	21441269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_21441417_21444965_21445062_21446282
ENSMUSG00000076432.14_21446274_21466924_1	chr12	-	423	3	ISM	ENSMUSG00000076432.14	ENSMUST00000103002.8	2110	5	513	5944	513	-5941	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGGGTTCATCCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	21466924	21446273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_21446447_21448241_21448366_21466798
ENSMUSG00000076432.14_21446382_21466990_1	chr12	-	381	3	ISM	ENSMUSG00000076432.14	ENSMUST00000103002.8	2110	5	447	6052	447	-6049	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACGCATCCAATCCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	21466990	21446381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_21446447_21448241_21448366_21466798
ENSMUSG00000076432.14_21466813_21467589_1	chr12	-	405	2	ISM	ENSMUSG00000076432.14	ENSMUST00000155480.9	1970	7	0	26480	0	-26480	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCACGGTCCTGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	21467589	21466812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_21467133_21467504
ENSMUSG00000076432.14_21466842_21467611_1	chr12	-	398	2	ISM	ENSMUSG00000076432.14	ENSMUST00000155480.9	1970	7	-22	26509	-22	-26509	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGGAGTCGGAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	21467611	21466841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_21467133_21467504
ENSMUSG00000076432.14_21466918_21467638_1	chr12	-	349	2	ISM	ENSMUSG00000076432.14	ENSMUST00000155480.9	1970	7	-49	26585	0	-26585	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGTCATCTCGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	21467638	21466917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_21467133_21467504
ENSMUSG00000076437.12_84499559_84500998_1	chr2	-	625	4	NNC	ENSMUSG00000076437.12	novel	747	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTTTAAATTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	84500998	84499558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_84499742_84500330_84500461_84500588_84500729_84500826
ENSMUSG00000076437.12_84499559_84500998_2	chr2	-	631	4	FSM	ENSMUSG00000076437.12	ENSMUST00000117299.10	747	4	116	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTTTAAATTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	84500998	84499558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_84499742_84500330_84500461_84500588_84500735_84500826
ENSMUSG00000076437.12_84499651_84501020_1	chr2	-	561	4	FSM	ENSMUSG00000076437.12	ENSMUST00000117299.10	747	4	94	92	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGGTTCAGTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	84501020	84499650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_84499742_84500330_84500461_84500588_84500735_84500826
ENSMUSG00000076437.12_84499651_84501114_1	chr2	-	655	4	FSM	ENSMUSG00000076437.12	ENSMUST00000117299.10	747	4	0	92	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGGTTCAGTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	84501114	84499650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_84499742_84500330_84500461_84500588_84500735_84500826
ENSMUSG00000076439.13_37323227_37331613_1	chr17	-	619	3	NNC	ENSMUSG00000076439.13	novel	626	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGTGTCTGGGCAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	37331613	37323226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_37323375_37328366_37328494_37331269
ENSMUSG00000076439.13_37323227_37331613_2	chr17	-	624	3	NNC	ENSMUSG00000076439.13	novel	626	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGTGTCTGGGCAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	37331613	37323226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_37323369_37328362_37328494_37331262
ENSMUSG00000076439.13_37323227_37331613_3	chr17	-	626	3	FSM	ENSMUSG00000076439.13	ENST00000376898.7	626	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGTGTCTGGGCAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	37331613	37323226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_37323375_37328366_37328494_37331262
ENSMUSG00000076439.13_37323282_37331288_1	chr17	-	141	2	FSM	ENSMUSG00000076439.13	ENST00000416766.6	521	2	325	55	325	-55	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCTGGTTGCCTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	37331288	37323281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_37323397_37331262
ENSMUSG00000076439.13_37323340_37331331_1	chr17	-	126	2	FSM	ENSMUSG00000076439.13	ENST00000416766.6	521	2	282	113	282	-113	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCCTGAGGGTGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	37331331	37323339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_37323397_37331262
ENSMUSG00000076441.10_31360219_31410684_2	chr2	+	1691	16	NNC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCTGCGTGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	31360218	31410684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_31360352_31364718_31364783_31366902_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ENSMUSG00000076441.10_31360219_31410684_3	chr2	+	1689	16	NNC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCTGCGTGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	31360218	31410684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410390
ENSMUSG00000076441.10_31360219_31410684_5	chr2	+	1691	16	NNC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCTGCGTGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	31360218	31410684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404843_31408737_31408804_31410383
ENSMUSG00000076441.10_31360219_31410684_6	chr2	+	1689	16	NNC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCTGCGTGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	31360218	31410684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388165_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ENSMUSG00000076441.10_31360219_31410684_7	chr2	+	1691	16	NNC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCTGCGTGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	31360218	31410684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390925_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ENSMUSG00000076441.10_31360219_31410684_8	chr2	+	1689	16	NNC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCTGCGTGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	31360218	31410684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383163_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ENSMUSG00000076614.8_113290170_113293913_1	chr12	-	940	5	FSM	ENSMUSG00000076614.8	ENST00000390555.3	1100	5	161	-1	161	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCTAGGCCACCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	113293913	113290169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_113290245_113291061_113291193_113292603_113292919_113293039_113293398_113293852
ENSMUSG00000076614.8_113292756_113293144_1	chr12	-	268	2	ISM	ENSMUSG00000076614.8	ENST00000390555.3	1100	5	930	2585	930	-2585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCATCATGGACACAGATG	NA	NA	NA	NA	NA	NA	NA	NA	113293144	113292755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_113292919_113293039
ENSMUSG00000076614.8_113293204_113293907_1	chr12	-	261	2	ISM	ENSMUSG00000076614.8	ENST00000390548.6	1128	5	167	3049	167	-3033	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCAGACGAAACCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	113293907	113293203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_113293410_113293852
ENSMUSG00000076614.8_113293259_113293954_1	chr12	-	253	2	ISM	ENSMUSG00000076614.8	ENST00000390548.6	1128	5	120	3104	120	-3088	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGATCCCGAGGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	113293954	113293258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_113293410_113293852
ENSMUSG00000076614.8_113293307_113294015_1	chr12	-	266	2	ISM	ENSMUSG00000076614.8	ENST00000390548.6	1128	5	59	3152	59	-3136	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTACTCTGACTCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	113294015	113293306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_113293410_113293852
ENSMUSG00000076617.10_113382570_113385010_1	chr12	-	474	3	ISM	ENSMUSG00000076617.10	ENST00000637539.2	1393	5	1317	-1	1317	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTTGTGGGGCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	113385010	113382569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_113382689_113384548_113384882_113384988
ENSMUSG00000076617.10_113382585_113385100_1	chr12	-	549	3	ISM	ENSMUSG00000076617.10	ENST00000637539.2	1393	5	1227	14	1227	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTTCAAGGTAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	113385100	113382584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_113382689_113384548_113384882_113384988
ENSMUSG00000076617.10_113382642_113385148_1	chr12	-	540	3	ISM	ENSMUSG00000076617.10	ENST00000637539.2	1393	5	1179	71	1179	-71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTCCACCTTCATCGT	NA	NA	NA	NA	NA	NA	NA	NA	113385148	113382641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_113382689_113384548_113384882_113384988
ENSMUSG00000076617.10_113384549_113385306_1	chr12	-	651	2	ISM	ENSMUSG00000076617.10	ENST00000637539.2	1393	5	1021	1978	1021	-1978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAACCCACACTGTACAAT	NA	NA	NA	NA	NA	NA	NA	NA	113385306	113384548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_113384882_113384988
ENSMUSG00000076617.10_113384749_113385717_1	chr12	-	574	3	NNC	ENSMUSG00000076617.10	novel	1393	5	NA	NA	610	-2178	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGGCAACTCTTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	113385717	113384748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_113384882_113384988_113385307_113385594
ENSMUSG00000076617.10_113385169_113386116_1	chr12	-	549	3	NNC	ENSMUSG00000076617.10	novel	1393	5	NA	NA	211	-2598	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	164	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTGAACCACTGGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	113386116	113385168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_113385307_113385594_113385925_113386035
ENSMUSG00000076617.10_113385220_113386171_1	chr12	-	553	3	NNC	ENSMUSG00000076617.10	novel	1393	5	NA	NA	156	-2649	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAACCTGGCAACCTAT	NA	NA	NA	NA	NA	NA	NA	NA	113386171	113385219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_113385307_113385594_113385925_113386035
ENSMUSG00000076617.10_113385263_113386229_1	chr12	-	568	3	NNC	ENSMUSG00000076617.10	novel	1393	5	NA	NA	98	-2692	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGACATCTTCCTCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	113386229	113385262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_113385307_113385594_113385925_113386035
ENSMUSG00000077450.14_33965807_33967531_1	chr17	-	1029	2	ISM	ENSMUSG00000077450.14	ENSMUST00000173860.8	1544	5	11749	83	11733	-83	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTCGTCTCCGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	33967531	33965806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_33966788_33967483
ENSMUSG00000077450.14_33965911_33967950_1	chr17	-	1068	3	ISM	ENSMUSG00000077450.14	ENSMUST00000173860.8	1544	5	11330	187	11314	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGCACTCCTGCTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	33967950	33965910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_33966788_33967483_33967565_33967840
ENSMUSG00000077450.14_33966037_33968011_1	chr17	-	1003	3	ISM	ENSMUSG00000077450.14	ENSMUST00000173860.8	1544	5	11269	313	11253	-313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTCTCTCTGAGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	33968011	33966036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_33966788_33967483_33967565_33967840
ENSMUSG00000077450.14_33966205_33968819_1	chr17	-	922	4	ISM	ENSMUSG00000077450.14	ENSMUST00000173860.8	1544	5	10461	481	10445	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGGGCATCTTGACA	NA	NA	NA	NA	NA	NA	NA	NA	33968819	33966204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755
ENSMUSG00000077450.14_33966388_33979254_1	chr17	-	929	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	250	4930	10	-664	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCCTTCACCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	33979254	33966387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
ENSMUSG00000078440.11_81220293_81223901_1	chr10	+	1128	5	FSM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	31	285	31	-285	multi-exon	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGGCCCCGGCCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	81220292	81223901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81223540
ENSMUSG00000078440.11_81220301_81223946_1	chr10	+	1165	5	FSM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	39	240	39	-240	multi-exon	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCAGAGCAGCTGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	81220300	81223946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81223540
ENSMUSG00000078440.11_81220301_81224004_1	chr10	+	1223	5	FSM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	39	182	39	-182	multi-exon	FALSE	canonical	NA	NA	NA	NA	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCTCTGTGGTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	81220300	81224004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81223540
ENSMUSG00000078440.11_81221679_81224186_1	chr10	+	1167	4	ISM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	1417	0	224	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCTCCTGCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	81221678	81224186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81221882_81222246_81222324_81223073_81223315_81223540
ENSMUSG00000078440.11_81221679_81224186_2	chr10	+	1161	4	NNC	ENSMUSG00000078440.11	novel	1444	5	NA	NA	224	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCTCCTGCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	81221678	81224186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_81221882_81222246_81222318_81223073_81223315_81223540
ENSMUSG00000078451.6_41366473_41374455_1	chr10	+	243	2	ISM	ENSMUSG00000078451.6	ENST00000424445.6	628	4	85	3470	38	-3470	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTGTGGGATGTGATCG	NA	NA	NA	NA	NA	NA	NA	NA	41366472	41374455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41366618_41374357
ENSMUSG00000078451.6_41366583_41377816_1	chr10	+	328	4	NNC	ENSMUSG00000078451.6	novel	628	4	NA	NA	148	-109	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGTCTTGTGCACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	41366582	41377816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_41366618_41374357_41374551_41377620_41377684_41377779
ENSMUSG00000078451.6_41374452_41377889_1	chr10	+	268	3	ISM	ENSMUSG00000078451.6	ENST00000424445.6	628	4	8064	36	8017	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCGAGTAGTTCAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	41374451	41377889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_41374547_41377620_41377684_41377779
ENSMUSG00000078453.4_17887008_17899036_1	chr10	-	837	3	NNC	ENSMUSG00000078453.4	novel	846	3	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGGTGGCTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	17899036	17887007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_17887565_17894595_17894654_17898814
ENSMUSG00000078490.11_155493869_155505800_1	chr4	+	1562	5	FSM	ENSMUSG00000078490.11	ENSMUST00000123952.9	2365	5	154	649	154	-649	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATTGGGCCTCAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	155493868	155505800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155494028_155500136_155500223_155503076_155503153_155503303_155503448_155504703
ENSMUSG00000078521.3_134238437_134251238_1	chr4	+	1148	3	FSM	ENSMUSG00000078521.3	ENSMUST00000105866.3	1275	3	127	0	37	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTGGTGTCGTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	134238436	134251238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_134238481_134248782_134248913_134250264
ENSMUSG00000078552.11_129504123_129507839_1	chr4	-	449	5	FSM	ENSMUSG00000078552.11	ENST00000409358.2	657	5	208	0	208	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGTCTGAGGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	129507839	129504122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129504271_129504701_129504834_129505055_129505133_129505561_129505614_129507799
ENSMUSG00000078552.11_129504180_129507885_1	chr4	-	438	5	FSM	ENSMUSG00000078552.11	ENST00000409358.2	657	5	162	57	162	-57	multi-exon	FALSE	canonical	NA	NA	NA	NA	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGCCCTATATGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	129507885	129504179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129504271_129504701_129504834_129505055_129505133_129505561_129505614_129507799
ENSMUSG00000078552.11_129504229_129507937_1	chr4	-	441	5	FSM	ENSMUSG00000078552.11	ENST00000409358.2	657	5	110	106	110	-106	multi-exon	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGAACGGCCATTACT	NA	NA	NA	NA	NA	NA	NA	NA	129507937	129504228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129504271_129504701_129504834_129505055_129505133_129505561_129505614_129507799
ENSMUSG00000078552.11_129504702_129508047_1	chr4	-	509	4	ISM	ENSMUSG00000078552.11	ENST00000409358.2	657	5	0	579	0	-579	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATAGGACAAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	129508047	129504701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_129504834_129505055_129505133_129505561_129505614_129507799
ENSMUSG00000078566.9_138493151_138496163_1	chr7	-	594	2	ISM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	15072	586	4397	-586	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCTAACTTTGTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	138496163	138493150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_138493690_138496108
ENSMUSG00000078566.9_138493269_138496404_1	chr7	-	637	3	ISM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	14831	704	4156	-704	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAGAACAAGTAAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	138496404	138493268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_138493690_138496108_138496259_138496338
ENSMUSG00000078566.9_138493307_138496432_1	chr7	-	627	3	ISM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	14803	742	4128	-742	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTGTAATCATAATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	138496432	138493306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_138493690_138496108_138496259_138496338
ENSMUSG00000078566.9_138493463_138500467_1	chr7	-	624	5	ISM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	10768	898	93	-898	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGGATCAATTAATAAGC	NA	NA	NA	NA	NA	NA	NA	NA	138500467	138493462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409
ENSMUSG00000078566.9_138493526_138500512_1	chr7	-	606	5	ISM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	10723	961	48	-961	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGCGGTGTTCCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	138500512	138493525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409
ENSMUSG00000078566.9_138493645_138511208_1	chr7	-	649	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	27	1080	16	-1080	multi-exon	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGATTTGGATCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	138511208	138493644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
ENSMUSG00000078566.9_138493668_138511225_1	chr7	-	643	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	10	1103	-1	-1103	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTTCCACTAGCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	138511225	138493667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
ENSMUSG00000078570.11_124743278_124744693_1	chr4	-	932	3	FSM	ENSMUSG00000078570.11	ENSMUST00000163946.2	762	3	-170	0	-91	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGACCTTTCTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	124744693	124743277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_124743756_124744024_124744227_124744441
ENSMUSG00000078570.11_124743278_124744811_1	chr4	-	1050	3	FSM	ENSMUSG00000078570.11	ENSMUST00000185036.2	1223	3	178	-5	178	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGACCTTTCTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	124744811	124743277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_124743756_124744024_124744227_124744441
ENSMUSG00000078570.11_124743339_124744863_1	chr4	-	1041	3	FSM	ENSMUSG00000078570.11	ENSMUST00000185036.2	1223	3	126	56	126	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTCAGCCCCACAAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	124744863	124743338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_124743756_124744024_124744227_124744441
ENSMUSG00000078578.10_135144241_135171017_1	chr3	+	810	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	0	1694	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAACCTGCATTATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	135144240	135171017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078578.10_135144241_135171152_1	chr3	+	809	8	FSM	ENSMUSG00000078578.10	ENST00000349311.12	842	8	33	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATCTGAGAAGACTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	135144240	135171152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_135144324_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078578.10_135144241_135171152_2	chr3	+	808	8	NNC	ENSMUSG00000078578.10	novel	842	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATCTGAGAAGACTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	135144240	135171152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_135144324_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168711_135168805_135170955
ENSMUSG00000078578.10_135144326_135165827_1	chr3	+	721	6	ISM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	0	8132	0	-5190	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATTTCTAAAGGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	135144325	135165827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735
ENSMUSG00000078578.10_135144508_135171017_1	chr3	+	709	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	182	2942	182	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAACCTGCATTATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	135144507	135171017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078578.10_135146681_135171017_1	chr3	+	514	7	NNC	ENSMUSG00000078578.10	novel	522	7	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAACCTGCATTATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	135146680	135171017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_135146755_135160946_135161011_135161106_135161139_135164558_135164641_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078578.10_135164576_135171412_1	chr3	+	718	4	ISM	ENSMUSG00000078578.10	ENST00000502404.5	522	7	17907	-395	17907	260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCAGCATCCGTTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	135164575	135171412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078578.10_135168728_135171609_1	chr3	+	731	2	ISM	ENSMUSG00000078578.10	ENST00000502404.5	522	7	22059	-592	22059	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACACCCTTTGTATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	135168727	135171609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_135168805_135170955
ENSMUSG00000078580.4_126990599_126992443_1	chr7	-	304	2	FSM	ENSMUSG00000078580.4	ENST00000252799.3	476	2	172	0	172	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACCAACATAGAGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	126992443	126990598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126990632_126992172
ENSMUSG00000078580.4_126990599_126992608_1	chr7	-	469	2	FSM	ENSMUSG00000078580.4	ENST00000252799.3	476	2	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACCAACATAGAGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	126992608	126990598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126990632_126992172
ENSMUSG00000078607.7_106916507_106921014_1	chr11	+	1544	4	FSM	ENSMUSG00000078607.7	ENST00000580729.3	1510	4	-34	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGCCAAGTGCAAAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	106916506	106921014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_106916796_106918635_106919095_106919191_106919384_106920410
ENSMUSG00000078619.11_106154121_106156078_1	chr11	-	1354	6	ISM	ENSMUSG00000078619.11	ENSMUST00000106843.8	2548	12	2547	116	2547	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAGGGGAAAGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	106156078	106154120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008
ENSMUSG00000078619.11_106154374_106156772_1	chr11	-	1354	8	ISM	ENSMUSG00000078619.11	ENSMUST00000106843.8	2548	12	1853	369	1853	-369	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATGTGGGAGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	106156772	106154373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713
ENSMUSG00000078619.11_106154625_106157784_1	chr11	-	1364	10	ISM	ENSMUSG00000078619.11	ENSMUST00000106843.8	2548	12	841	620	841	-620	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGGAGGCTGGAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	106157784	106154624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716
ENSMUSG00000078619.11_106154845_106158309_1	chr11	-	1392	12	FSM	ENSMUSG00000078619.11	ENSMUST00000106843.8	2548	12	316	840	316	-840	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCAAGAGCCCGTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	106158309	106154844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159
ENSMUSG00000078619.11_106155295_106163467_1	chr11	-	1337	11	ISM	ENSMUSG00000078619.11	ENSMUST00000021052.16	2747	13	331	1290	331	-1290	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGGCTCCGTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	106163467	106155294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163318
ENSMUSG00000078622.9_106090185_106092994_1	chr11	-	1816	2	ISM	ENSMUSG00000078622.9	ENSMUST00000106865.8	704	6	2260	-1420	2260	1420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAATCTGTGTGCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	106092994	106090184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106091843_106092836
ENSMUSG00000078622.9_106090228_106092994_1	chr11	-	1773	2	ISM	ENSMUSG00000078622.9	ENSMUST00000106865.8	704	6	2260	-1377	2260	1377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATTCATATGAACTACCT	NA	NA	NA	NA	NA	NA	NA	NA	106092994	106090227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106091843_106092836
ENSMUSG00000078622.9_106090346_106093276_1	chr11	-	1732	3	ISM	ENSMUSG00000078622.9	ENSMUST00000106865.8	704	6	1978	-1259	1978	1259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTACAAATCTTTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	106093276	106090345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106091843_106092836_106093005_106093209
ENSMUSG00000078622.9_106090525_106095773_1	chr11	-	1768	6	ISM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	11397	2291	-519	1080	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGCTGTTGCCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	106095773	106090524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746
ENSMUSG00000078622.9_106090598_106095819_1	chr11	-	1741	6	ISM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	11351	2364	-565	1007	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGCGGGTAGTGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	106095819	106090597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746
ENSMUSG00000078622.9_106090847_106099066_1	chr11	-	1744	9	ISM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	8104	2613	-3812	758	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTGAAACAAATAACCAAT	NA	NA	NA	NA	NA	NA	NA	NA	106099066	106090846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020
ENSMUSG00000078622.9_106091046_106101220_1	chr11	-	1728	10	ISM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	5950	2812	5950	559	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATGCATGACAAGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	106101220	106091045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113
ENSMUSG00000078622.9_106091301_106104001_1	chr11	-	1744	12	ISM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	3169	3067	3169	304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAAGTGGAACGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	106104001	106091300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906
ENSMUSG00000078622.9_106091366_106104054_1	chr11	-	1732	12	ISM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	3116	3132	3116	239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAATATCTATTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	106104054	106091365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906
ENSMUSG00000078622.9_106091452_106104140_1	chr11	-	1732	12	ISM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	3030	3218	3030	153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGATCATGAAATTTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	106104140	106091451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906
ENSMUSG00000078622.9_106091605_106107170_1	chr11	-	1822	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	0	3371	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAATGAAAGGGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	106107170	106091604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ENSMUSG00000078627.10_105251785_105280483_1	chr11	-	752	6	ISM	ENSMUSG00000078627.10	ENST00000311269.10	2733	10	61524	161	61524	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCCAGCACAGGCAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	105280483	105251784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_105252026_105255341_105255385_105262687_105262802_105272983_105273094_105276242_105276413_105280409
ENSMUSG00000078627.10_105251865_105280567_1	chr11	-	756	6	ISM	ENSMUSG00000078627.10	ENST00000311269.10	2733	10	61440	241	61440	-241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGCAGTTACCATTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	105280567	105251864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_105252026_105255341_105255385_105262687_105262802_105272983_105273094_105276242_105276413_105280409
ENSMUSG00000078627.10_105255361_105280781_1	chr11	-	790	5	ISM	ENSMUSG00000078627.10	ENST00000311269.10	2733	10	61226	3737	61226	-3737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACCGGAAGAAAATGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	105280781	105255360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_105255385_105262687_105262802_105272983_105273094_105276242_105276413_105280409
ENSMUSG00000078627.10_105273073_105280999_1	chr11	-	781	3	ISM	ENSMUSG00000078627.10	ENST00000311269.10	2733	10	61008	21449	61008	-21449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTGTGAGATGTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	105280999	105273072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_105273094_105276242_105276413_105280409
ENSMUSG00000078627.10_105276316_105281079_1	chr11	-	767	2	ISM	ENSMUSG00000078627.10	ENST00000311269.10	2733	10	60928	24692	60928	-24692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGTGGGAAGTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	105281079	105276315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_105276413_105280409
ENSMUSG00000078627.10_105281061_105287827_1	chr11	-	750	2	ISM	ENSMUSG00000078627.10	ENST00000311269.10	2733	10	54180	29437	54180	-29437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGACGATGTGTCCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	105287827	105281060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_105281758_105287774
ENSMUSG00000078627.10_105281212_105299533_1	chr11	-	758	3	ISM	ENSMUSG00000078627.10	ENSMUST00000138977.8	2979	12	46587	29588	42474	-29588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAGCAACAAAGCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	105299533	105281211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_105281758_105287774_105287922_105299468
ENSMUSG00000078627.10_105281354_105329685_1	chr11	-	764	4	ISM	ENSMUSG00000078627.10	ENSMUST00000138977.8	2979	12	16435	29730	12322	-29730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGCTATAAAAGGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	105329685	105281353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_105281758_105287774_105287922_105299468_105299641_105329644
ENSMUSG00000078627.10_105281502_105341959_1	chr11	-	750	5	ISM	ENSMUSG00000078627.10	ENSMUST00000138977.8	2979	12	4161	29878	48	-29878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGGTAGGACCAAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	105341959	105281501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_105281758_105287774_105287922_105299468_105299641_105329644_105329762_105341901
ENSMUSG00000078650.3_101258625_101267668_1	chr11	+	999	4	FSM	ENSMUSG00000078650.3	ENST00000585489.1	1054	4	58	-3	58	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACTAGGAACAACTAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	101258624	101267668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101258853_101261531_101261642_101263527_101263634_101267113
ENSMUSG00000078650.3_101258694_101267537_1	chr11	+	833	4	FSM	ENSMUSG00000078650.3	ENST00000592383.5	985	4	154	-2	127	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGCAACAGTTCCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	101258693	101267537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101258853_101261531_101261666_101265415_101265532_101267113
ENSMUSG00000078652.10_101207039_101213494_1	chr11	+	1795	11	FSM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	0	869	0	-869	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCTCTTCTGATAATGT	NA	NA	NA	NA	NA	NA	NA	NA	101207038	101213494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUSG00000078652.10_101207174_101213872_1	chr11	+	2085	11	FSM	ENSMUSG00000078652.10	ENST00000293362.7	2667	11	59	523	59	-491	multi-exon	FALSE	canonical	NA	NA	NA	NA	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATAGAAGAGTTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	101207173	101213872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101210989_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUSG00000078652.10_101207177_101213586_1	chr11	+	1749	11	FSM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	138	777	62	-777	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCTCAGGTTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	101207176	101213586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUSG00000078652.10_101207183_101213873_1	chr11	+	2063	10	NNC	ENSMUSG00000078652.10	novel	2667	11	NA	NA	68	-490	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATAGAAGAGTTGCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	101207182	101213873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_101207315_101208135_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101210989_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUSG00000078652.10_101207210_101213947_1	chr11	+	2110	10	NNC	ENSMUSG00000078652.10	novel	2667	11	NA	NA	95	-416	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAGCTTTTTAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	101207209	101213947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_101207315_101208135_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101210989_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUSG00000078652.10_101207224_101213924_1	chr11	+	2087	11	FSM	ENSMUSG00000078652.10	ENST00000293362.7	2667	11	109	471	109	-439	multi-exon	FALSE	canonical	NA	NA	NA	NA	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGTTTGTATTAATCGCA	NA	NA	NA	NA	NA	NA	NA	NA	101207223	101213924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101210989_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUSG00000078652.10_101207248_101213647_1	chr11	+	1739	11	FSM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	209	716	133	-716	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTAGGCCAGCATGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	101207247	101213647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUSG00000078652.10_101207265_101213984_1	chr11	+	2106	11	FSM	ENSMUSG00000078652.10	ENST00000293362.7	2667	11	150	411	150	-379	multi-exon	FALSE	canonical	NA	NA	NA	NA	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTGCCAGTGACTGACT	NA	NA	NA	NA	NA	NA	NA	NA	101207264	101213984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101210989_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUSG00000078652.10_101207292_101213988_1	chr11	+	2069	10	NNC	ENSMUSG00000078652.10	novel	2667	11	NA	NA	177	-375	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCAGTGACTGACTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	101207291	101213988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_101207315_101208135_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101210989_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUSG00000078652.10_101208198_101214125_1	chr11	+	2121	9	ISM	ENSMUSG00000078652.10	ENST00000293362.7	2667	11	1083	270	1083	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCCAAGAATAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	101208197	101214125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101210989_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUSG00000078652.10_101208506_101213922_1	chr11	+	1794	8	ISM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	1467	441	1391	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCGTTTGTATTAATCG	NA	NA	NA	NA	NA	NA	NA	NA	101208505	101213922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUSG00000078652.10_101210989_101214395_1	chr11	+	2105	5	ISM	ENSMUSG00000078652.10	ENST00000293362.7	2667	11	3874	0	3874	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGGGTCACACATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	101210988	101214395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUSG00000078656.12_101144533_101150375_1	chr11	+	1099	6	NNC	ENSMUSG00000078656.12	novel	1106	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTGTTACTACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	101144532	101150375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_101144634_101144863_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149735
ENSMUSG00000078670.4_73390341_73426667_1	chr7	+	500	2	NNC	ENSMUSG00000078670.4	novel	567	2	NA	NA	95	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGAGTCACGAGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	73390340	73426667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_73390569_73426395
ENSMUSG00000078670.4_73390341_73426667_2	chr7	+	496	2	NNC	ENSMUSG00000078670.4	novel	2683	3	NA	NA	95	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGAGTCACGAGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	73390340	73426667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_73390563_73426393
ENSMUSG00000078671.12_73147455_73187543_1	chr7	-	1922	12	NNC	ENSMUSG00000078671.12	novel	1946	12	NA	NA	9	-10	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTAGAACATACGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	73187543	73147454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163895_73165473_73165561_73169224_73169457_73187056
ENSMUSG00000078671.12_73147455_73187543_2	chr7	-	1922	12	NNC	ENSMUSG00000078671.12	novel	1946	12	NA	NA	9	-10	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTAGAACATACGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	73187543	73147454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154872_73157553_73157662_73163837_73163900_73165473_73165561_73169224_73169457_73187056
ENSMUSG00000078671.12_73147455_73187543_3	chr7	-	1927	12	FSM	ENSMUSG00000078671.12	ENST00000626782.2	1946	12	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTAGAACATACGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	73187543	73147454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224_73169457_73187056
ENSMUSG00000078671.12_73165519_73190585_1	chr7	-	340	3	ISM	ENSMUSG00000101970.9	ENST00000629685.2	589	5	14498	45	909	-45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCGAAGCAGACAAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	73190585	73165518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_73165561_73169224_73169457_73190519
ENSMUSG00000078671.12_73169349_73205048_1	chr7	-	343	4	ISM	ENSMUSG00000101970.9	ENST00000629685.2	589	5	35	3875	35	-3875	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTCTTCTGAGAGCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	73205048	73169348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_73169457_73190519_73190653_73199344_73199401_73205002
ENSMUSG00000078681.11_65347513_65351471_1	chr7	+	313	3	ISM	ENSMUSG00000078681.11	ENSMUST00000206517.2	905	6	4288	179	4288	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGGACCAGCGGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	65347512	65351471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_65347619_65348839_65348916_65351340
ENSMUSG00000078684.9_88706978_88723511_1	chr3	+	1051	8	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	24455	-9383	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCTCCAGAAAGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	88706977	88723511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_88707026_88715213_88715410_88715859_88715950_88717975_88718145_88719320_88719466_88721050_88721142_88722938_88723056_88723316
ENSMUSG00000078713.9_45105208_45108108_1	chr4	-	732	2	FSM	ENSMUSG00000078713.9	ENST00000401811.3	698	2	0	-34	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTTTTGTGTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	45108108	45105207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_45105645_45107813
ENSMUSG00000078762.11_30353141_30358757_1	chr7	-	1344	10	ISM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	5662	0	5662	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGCACTGCCCAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30358757	30353140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713
ENSMUSG00000078762.11_30353141_30358809_1	chr7	-	1396	10	ISM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	5610	0	5610	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGCACTGCCCAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30358809	30353140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713
ENSMUSG00000078762.11_30353363_30359601_1	chr7	-	1344	12	ISM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	4818	222	4818	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTGGCTAGAAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	30359601	30353362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518
ENSMUSG00000078762.11_30353595_30361084_1	chr7	-	1327	13	ISM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	3335	454	3335	-454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGGGGGGTTATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	30361084	30353594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053
ENSMUSG00000078762.11_30353662_30361133_1	chr7	-	1309	13	ISM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	3286	521	3286	-521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTCAAATCTGCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	30361133	30353661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053
ENSMUSG00000078762.11_30356454_30361368_1	chr7	-	1318	13	ISM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	3051	3313	3051	-3313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTCCAAGACCAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	30361368	30356453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293
ENSMUSG00000078762.11_30356597_30362391_1	chr7	-	1320	13	ISM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	2028	3456	2028	-3456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGGAAAGTAAGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	30362391	30356596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360
ENSMUSG00000078762.11_30357127_30364363_1	chr7	-	1313	15	ISM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	56	3986	56	-3986	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGCACCACAGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	30364363	30357126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ENSMUSG00000078765.12_30262957_30264669_1	chr7	+	588	6	ISM	ENSMUSG00000078765.12	ENSMUST00000163654.8	781	7	207	118	176	65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCACTCTCCAGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	30262956	30264669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264519
ENSMUSG00000078765.12_30263626_30264669_1	chr7	+	481	4	ISM	ENSMUSG00000078765.12	ENSMUST00000166257.8	546	6	845	-65	845	65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCACTCTCCAGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	30263625	30264669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30263727_30263898_30264033_30264127_30264224_30264519
ENSMUSG00000078765.12_30263897_30264790_1	chr7	+	503	3	ISM	ENSMUSG00000078765.12	ENSMUST00000167361.8	860	8	1122	-4	1116	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGGTTTCCTTCCACC	NA	NA	NA	NA	NA	NA	NA	NA	30263896	30264790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_30264033_30264127_30264224_30264519
ENSMUSG00000078768.3_29776762_29786584_1	chr7	-	1469	3	ISM	ENSMUSG00000078768.3	ENSMUST00000088785.6	1709	4	3368	0	3368	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTGTGTGGCAGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	29786584	29776761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29778044_29780515_29780643_29786524
ENSMUSG00000078768.3_29776881_29789835_1	chr7	-	1473	4	FSM	ENSMUSG00000078768.3	ENSMUST00000088785.6	1709	4	117	119	117	-119	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTATGAATGCAGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	29789835	29776880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_29778044_29780515_29780643_29786524_29786585_29789712
ENSMUSG00000078768.3_29776992_29789888_1	chr7	-	1415	4	FSM	ENSMUSG00000078768.3	ENSMUST00000088785.6	1709	4	64	230	64	-230	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTCAGAACTGTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	29789888	29776991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_29778044_29780515_29780643_29786524_29786585_29789712
ENSMUSG00000078771.11_79418104_79421385_1	chr11	-	716	2	FSM	ENSMUSG00000078771.11	ENSMUST00000103236.4	1463	2	29	718	29	-710	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAACGGTGACTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	79421385	79418103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_79418629_79421194
ENSMUSG00000078771.11_79418104_79421415_1	chr11	-	746	2	FSM	ENSMUSG00000078771.11	ENSMUST00000103236.4	1463	2	-1	718	-1	-710	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAACGGTGACTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	79421415	79418103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_79418629_79421194
ENSMUSG00000078784.9_14671349_14674717_1	chr3	-	354	3	ISM	ENSMUSG00000078784.9	ENSMUST00000108365.4	559	4	1564	0	1564	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTCTTTAAATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	14674717	14671348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_14671469_14672236_14672354_14674600
ENSMUSG00000078784.9_14672287_14676345_1	chr3	-	260	3	FSM	ENSMUSG00000078784.9	ENSMUST00000186870.7	1174	3	-24	938	0	-934	multi-exon	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCAAACTTCTCAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	14676345	14672286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_14672354_14674600_14674718_14676269
ENSMUSG00000078789.10_75068469_75074154_1	chr11	-	1526	8	ISM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	7191	0	7191	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTTGGTGGAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	75074154	75068468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027
ENSMUSG00000078789.10_75068627_75074341_1	chr11	-	1410	9	ISM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	7004	158	7004	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACACACATAAGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	75074341	75068626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294
ENSMUSG00000078789.10_75068627_75074452_1	chr11	-	1521	9	ISM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	6893	158	6893	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACACACATAAGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	75074452	75068626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294
ENSMUSG00000078789.10_75068843_75076674_1	chr11	-	1491	11	ISM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	4671	374	4671	-374	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAATTGGCTAGCCGATT	NA	NA	NA	NA	NA	NA	NA	NA	75076674	75068842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610
ENSMUSG00000078789.10_75068938_75069613_1	chr11	-	452	2	FSM	ENSMUSG00000038268.5	ENSMUST00000071562.3	2670	2	48	2170	48	-2170	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCCTTAAGGAACCTATC	NA	NA	NA	NA	NA	NA	NA	NA	75069613	75068937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_75069214_75069437
ENSMUSG00000078789.10_75069122_75081345_1	chr11	-	1486	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	0	653	0	-653	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTCTGCAGGAGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	75081345	75069121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
ENSMUSG00000078812.11_69807546_69808847_1	chr11	-	933	4	ISM	ENSMUSG00000078812.11	ENSMUST00000108610.8	1409	6	2609	0	283	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	69808847	69807545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742
ENSMUSG00000078812.11_69807689_69810103_1	chr11	-	917	5	ISM	ENSMUSG00000078812.11	ENSMUST00000108610.8	1409	6	1353	143	-973	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAGGGGGGGAGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	69810103	69807688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976
ENSMUSG00000078812.11_69807857_69812104_1	chr11	-	924	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	108	311	66	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAAGCTGGATTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	69812104	69807856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
ENSMUSG00000078812.11_69808008_69812212_1	chr11	-	881	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	0	462	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTAGCTCCCTTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	69812212	69808007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
ENSMUSG00000078813.4_3663199_3665835_1	chr7	-	1227	2	ISM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	3004	102	3004	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTGGAAAATGTGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	3665835	3663198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3664360_3665769
ENSMUSG00000078813.4_3663388_3666701_1	chr7	-	1247	3	ISM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	2138	291	2138	-291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATGCCTTAAGATATTC	NA	NA	NA	NA	NA	NA	NA	NA	3666701	3663387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3664360_3665769_3666024_3666680
ENSMUSG00000078813.4_3663533_3666828_1	chr7	-	1229	3	ISM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	2011	436	2011	-436	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGGGCTGCAGGTACAA	NA	NA	NA	NA	NA	NA	NA	NA	3666828	3663532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3664360_3665769_3666024_3666680
ENSMUSG00000078813.4_3663642_3668410_1	chr7	-	1248	4	FSM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	429	545	429	-545	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCATGGAAGTACCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	3668410	3663641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_3664360_3665769_3666024_3666680_3666861_3668314
ENSMUSG00000078813.4_3663819_3668595_1	chr7	-	1256	4	FSM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	244	722	244	-722	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCCGGTCCTCCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	3668595	3663818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_3664360_3665769_3666024_3666680_3666861_3668314
ENSMUSG00000078813.4_3663984_3668738_1	chr7	-	1234	4	FSM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	101	887	101	-887	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGCAGAGAGGAAGAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	3668738	3663983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_3664360_3665769_3666024_3666680_3666861_3668314
ENSMUSG00000078816.11_3352412_3359191_1	chr7	+	291	4	ISM	ENSMUSG00000078816.11	ENSMUST00000172109.4	2119	17	251	19692	251	-19679	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGCCCCGCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	3352411	3359191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079
ENSMUSG00000078816.11_3359381_3362252_1	chr7	+	299	3	ISM	ENSMUSG00000078816.11	ENSMUST00000172109.4	2119	17	7220	16631	7220	-16618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGTGTGGGATTGGGATA	NA	NA	NA	NA	NA	NA	NA	NA	3359380	3362252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3359484_3360904_3361062_3362213
ENSMUSG00000078816.11_3360938_3362722_1	chr7	+	333	3	ISM	ENSMUSG00000078816.11	ENSMUST00000172109.4	2119	17	8777	16161	8777	-16148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAAGTTTGAGGTACCC	NA	NA	NA	NA	NA	NA	NA	NA	3360937	3362722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3361062_3362213_3362349_3362648
ENSMUSG00000078816.11_3362692_3368113_1	chr7	+	295	4	ISM	ENSMUSG00000078816.11	ENST00000683513.1	2274	17	10654	10757	10531	-10757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTCCAGGATGACGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	3362691	3368113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3362737_3363027_3363058_3367375_3367529_3368046
ENSMUSG00000078816.11_3367474_3370917_1	chr7	+	306	3	ISM	ENSMUSG00000078816.11	ENST00000683513.1	2274	17	15436	7953	15313	-7953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGCAAGTTTAAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	3367473	3370917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3367529_3368046_3368236_3370855
ENSMUSG00000078816.11_3368133_3372010_1	chr7	+	297	4	ISM	ENSMUSG00000078816.11	ENSMUST00000172109.4	2119	17	15972	6873	15972	-6860	internal_fragment	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACATCAAGATCACAGACT	NA	NA	NA	NA	NA	NA	NA	NA	3368132	3372010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3368236_3370855_3370948_3371032_3371096_3371971
ENSMUSG00000078816.11_3370885_3375964_1	chr7	+	298	4	ISM	ENSMUSG00000078816.11	ENSMUST00000172109.4	2119	17	18724	2919	18724	-2906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTGGTCTTTTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	3370884	3375964	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3370948_3371032_3371096_3371971_3372111_3375931
ENSMUSG00000078816.11_3375953_3378762_1	chr7	+	302	3	ISM	ENSMUSG00000078816.11	ENST00000683513.1	2274	17	23915	108	23792	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGGGCTTTACTTATG	NA	NA	NA	NA	NA	NA	NA	NA	3375952	3378762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_3376013_3378343_3378485_3378661
ENSMUSG00000078817.5_3271147_3281887_1	chr7	-	772	5	ISM	ENSMUSG00000078817.5	ENST00000391773.6	3148	10	16269	0	16269	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGTAAGGAGAACCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	3281887	3271146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3271235_3273877_3274049_3277021_3277193_3279599_3279771_3281716
ENSMUSG00000078817.5_3271147_3288740_1	chr7	-	1220	7	ISM	ENSMUSG00000078817.5	ENST00000391775.7	2977	9	9416	0	9416	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGTAAGGAGAACCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	3288740	3271146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3271235_3273877_3274049_3279599_3279771_3281716_3281888_3282504_3282676_3283783_3283951_3288459
ENSMUSG00000078817.5_3271150_3288844_1	chr7	-	1321	7	ISM	ENSMUSG00000078817.5	ENST00000391775.7	2977	9	9312	3	9312	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCAGTAAGGAGAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	3288844	3271149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3271235_3273877_3274049_3279599_3279771_3281716_3281888_3282504_3282676_3283783_3283951_3288459
ENSMUSG00000078817.5_3271193_3288920_1	chr7	-	1354	7	ISM	ENSMUSG00000078817.5	ENST00000391775.7	2977	9	9236	46	9236	-46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCACTTCGAGTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	3288920	3271192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3271235_3273877_3274049_3279599_3279771_3281716_3281888_3282504_3282676_3283783_3283951_3288459
ENSMUSG00000078817.5_3273951_3282632_1	chr7	-	739	5	ISM	ENSMUSG00000078817.5	ENST00000391773.6	3148	10	15524	2804	15524	-2804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGGGACACAGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	3282632	3273950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3274049_3277021_3277193_3279599_3279771_3281716_3281888_3282504
ENSMUSG00000078817.5_3273973_3289036_1	chr7	-	1333	6	ISM	ENSMUSG00000078817.5	ENST00000391775.7	2977	9	9120	2826	9120	-2826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTTTATTTGACCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	3289036	3273972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3274049_3279599_3279771_3281716_3281888_3282504_3282676_3283783_3283951_3288459
ENSMUSG00000078817.5_3274021_3283818_1	chr7	-	747	6	ISM	ENSMUSG00000078817.5	ENST00000391773.6	3148	10	14338	2874	14338	-2874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGAGGACCTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	3283818	3274020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3274049_3277021_3277193_3279599_3279771_3281716_3281888_3282504_3282676_3283783
ENSMUSG00000078817.5_3277145_3288478_1	chr7	-	751	6	ISM	ENSMUSG00000078817.5	ENSMUST00000108653.4	6928	10	9765	9687	9678	-5998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTCCAGGTCAACACAT	NA	NA	NA	NA	NA	NA	NA	NA	3288478	3277144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3277193_3279599_3279771_3281716_3281888_3282504_3282676_3283783_3283955_3288459
ENSMUSG00000078817.5_3279598_3289148_1	chr7	-	1375	5	ISM	ENSMUSG00000078817.5	ENSMUST00000108653.4	6928	10	9095	12140	9008	-8451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGATTCCCAATTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	3289148	3279597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3279771_3281716_3281888_3282504_3282676_3283783_3283955_3288459
ENSMUSG00000078817.5_3282549_3289506_1	chr7	-	1345	3	ISM	ENSMUSG00000078817.5	ENSMUST00000108653.4	6928	10	8737	15091	8650	-11402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGGGCTGCAGCACCC	NA	NA	NA	NA	NA	NA	NA	NA	3289506	3282548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3282676_3283783_3283955_3288459
ENSMUSG00000078817.5_3283880_3289148_1	chr7	-	760	2	ISM	ENSMUSG00000078817.5	ENST00000391773.6	3148	10	9008	12733	9008	-12733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCTGGCCTTATACCGAA	NA	NA	NA	NA	NA	NA	NA	NA	3289148	3283879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3283951_3288459
ENSMUSG00000078817.5_3288878_3294040_1	chr7	-	1345	2	ISM	ENSMUSG00000078817.5	ENST00000391773.6	3148	10	4116	17731	4116	-17731	internal_fragment	FALSE	canonical	NA	NA	NA	NA	813	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAACTTCTTGGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	3294040	3288877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3290141_3293958
ENSMUSG00000078817.5_3289398_3293977_1	chr7	-	762	2	ISM	ENSMUSG00000078817.5	ENST00000391773.6	3148	10	4179	18251	4179	-18251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATTTCTACAGATATTT	NA	NA	NA	NA	NA	NA	NA	NA	3293977	3289397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3290141_3293958
ENSMUSG00000078817.5_3289454_3294033_1	chr7	-	762	2	ISM	ENSMUSG00000078817.5	ENST00000391773.6	3148	10	4123	18307	4123	-18307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAGAACACCCCAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	3294033	3289453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3290141_3293958
ENSMUSG00000078817.5_3289584_3298006_1	chr7	-	764	3	ISM	ENSMUSG00000078817.5	ENST00000391773.6	3148	10	150	18437	150	-18437	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCCTCTGCTGGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	3298006	3289583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3290141_3293958_3294040_3297880
ENSMUSG00000078817.5_3289649_3298052_1	chr7	-	745	3	ISM	ENSMUSG00000078817.5	ENST00000391773.6	3148	10	104	18502	104	-18502	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCTATTCATCATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	3298052	3289648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3290141_3293958_3294040_3297880
ENSMUSG00000078817.5_3289704_3298100_1	chr7	-	738	3	ISM	ENSMUSG00000078817.5	ENST00000391773.6	3148	10	56	18557	56	-18557	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGGCCGGAGCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	3298100	3289703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3290141_3293958_3294040_3297880
ENSMUSG00000078862.11_177589471_177590357_1	chr2	-	681	2	ISM	ENSMUSG00000078862.11	ENSMUST00000178829.8	1665	4	5120	2141	5120	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCAGCTGTGTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	177590357	177589470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_177590024_177590229
ENSMUSG00000078886.13_175757172_175769183_1	chr2	+	1328	4	FSM	ENSMUSG00000078886.13	ENSMUST00000109007.8	1621	4	48	245	0	-245	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTATGTTAACATTAG	NA	NA	NA	NA	NA	NA	NA	NA	175757171	175769183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_175757228_175760682_175760738_175767761_175767889_175768093
ENSMUSG00000078887.11_175661012_175670797_1	chr2	+	793	4	FSM	ENSMUSG00000078887.11	ENSMUST00000109011.8	1445	4	0	652	0	-652	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTTGTAATAACATTGC	NA	NA	NA	NA	NA	NA	NA	NA	175661011	175670797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349
ENSMUSG00000078887.11_175664894_175670913_1	chr2	+	694	3	ISM	ENSMUSG00000078887.11	ENSMUST00000109012.4	1665	4	0	2128	0	-536	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAATGTAATGTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	175664893	175670913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_175664897_175670021_175670149_175670349
ENSMUSG00000078897.11_175265444_175277575_1	chr2	-	1440	4	FSM	ENSMUSG00000078897.11	ENSMUST00000152941.2	1198	4	0	-242	0	242	multi-exon	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAGTGTAAGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	175277575	175265443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_175266617_175266821_175266949_175273972_175274028_175277490
ENSMUSG00000078899.10_175167887_175179990_1	chr2	-	1420	4	ISM	ENSMUSG00000078899.10	ENSMUST00000121393.9	4402	5	0	4139	0	-1351	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAGTGTAAGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	175179990	175167886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_175169060_175169264_175169392_175176415_175176471_175179925
ENSMUSG00000078903.11_175038735_175039634_1	chr2	-	699	2	ISM	ENSMUSG00000078903.11	ENSMUST00000165892.8	1665	4	5220	2028	5220	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCACATACCTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	175039634	175038734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_175039399_175039599
ENSMUSG00000078903.11_175038735_175039726_1	chr2	-	791	2	ISM	ENSMUSG00000078903.11	ENSMUST00000165892.8	1665	4	5128	2028	5128	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCACATACCTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	175039726	175038734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_175039399_175039599
ENSMUSG00000078903.11_175038939_175048669_1	chr2	-	738	4	FSM	ENSMUSG00000078903.11	ENSMUST00000109055.2	965	4	23	204	23	-204	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGCTAAATTTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	175048669	175038938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_175039399_175039599_175039727_175044851_175044907_175048573
ENSMUSG00000078919.11_168052436_168069372_1	chr2	-	519	7	FSM	ENSMUSG00000078919.11	ENST00000683466.1	642	7	52	71	52	-71	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTCCCGTGTTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	168069372	168052435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_168052557_168053285_168053401_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322
ENSMUSG00000078923.11_167450480_167473892_1	chr2	-	1067	4	FSM	ENSMUSG00000078923.11	ENST00000557021.5	1811	4	34	710	0	206	multi-exon	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAACCCTCCCCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	167473892	167450479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_167451168_167452223_167452350_167459748_167459969_167473859
ENSMUSG00000078941.10_100787487_100800704_1	chr13	+	765	4	ISM	ENSMUSG00000078941.10	ENSMUST00000022135.15	1298	5	0	2163	0	-2163	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGGGAAAGAAGAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	100787486	100800704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_100787954_100790698_100790792_100800402_100800462_100800558
ENSMUSG00000078941.10_100787617_100802437_1	chr13	+	738	5	FSM	ENSMUSG00000078941.10	ENSMUST00000022135.15	1298	5	130	430	130	-430	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCCCAGTAATGAACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	100787616	100802437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_100787954_100790698_100790792_100800402_100800462_100800558_100800705_100802334
ENSMUSG00000078941.10_100790698_100802867_1	chr13	+	832	4	ISM	ENSMUSG00000078941.10	ENSMUST00000022135.15	1298	5	3211	0	2810	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACATCTCTTTAATAGTA	NA	NA	NA	NA	NA	NA	NA	NA	100790697	100802867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_100790792_100800402_100800462_100800558_100800705_100802334
ENSMUSG00000078970.6_17161918_17183346_1	chr11	+	1552	8	FSM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	0	450	0	-450	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCAGGGCATCTCATAC	NA	NA	NA	NA	NA	NA	NA	NA	17161917	17183346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
ENSMUSG00000078970.6_17162066_17183409_1	chr11	+	1467	8	FSM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	148	387	148	-387	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATTCTTAGAAATTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	17162065	17183409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
ENSMUSG00000078970.6_17169057_17183521_1	chr11	+	1455	7	ISM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	7139	275	7139	-275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTCTCTGTACACTGT	NA	NA	NA	NA	NA	NA	NA	NA	17169056	17183521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
ENSMUSG00000078970.6_17172256_17183659_1	chr11	+	1476	6	ISM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	10338	137	10338	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTCGTTTACTCAGATA	NA	NA	NA	NA	NA	NA	NA	NA	17172255	17183659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
ENSMUSG00000078970.6_17172312_17183796_1	chr11	+	1557	6	ISM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	10394	0	10394	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTGGAGGCGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	17172311	17183796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
ENSMUSG00000078972.2_155784043_155796572_1	chr2	+	681	2	FSM	ENSMUSG00000078972.2	ENST00000374375.1	1298	2	617	0	617	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACAACCAGGGCTACAC	NA	NA	NA	NA	NA	NA	NA	NA	155784042	155796572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_155784651_155796499
ENSMUSG00000078974.11_16451537_16454762_1	chr11	-	298	2	ISM	ENSMUSG00000078974.11	ENSMUST00000109641.2	450	4	3307	-114	3307	101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAATTCAGATGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	16454762	16451536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_16451808_16454735
ENSMUSG00000078974.11_16451638_16458132_1	chr11	-	427	4	FSM	ENSMUSG00000078974.11	ENSMUST00000178855.8	779	4	352	0	34	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTATCAAATTTTAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	16458132	16451637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458078
ENSMUSG00000078974.11_16451638_16458484_1	chr11	-	746	4	NNC	ENSMUSG00000078974.11	novel	754	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTATCAAATTTTAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	16458484	16451637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_16451808_16454735_16454831_16456372_16456473_16458103
ENSMUSG00000078974.11_16451651_16458181_1	chr11	-	463	4	FSM	ENSMUSG00000078974.11	ENSMUST00000178855.8	779	4	303	13	-15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCATAACAGACATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	16458181	16451650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458078
ENSMUSG00000079011.10_75317615_75328041_1	chr8	-	805	3	ISM	ENSMUSG00000079011.10	ENSMUST00000127757.8	1445	10	232534	0	232524	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAGAGATGACAATGA	NA	NA	NA	NA	NA	NA	NA	NA	75328041	75317614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_75318084_75321673_75321759_75327790
ENSMUSG00000079017.4_103408426_103409143_1	chr12	-	270	2	ISM	ENSMUSG00000079017.4	ENSMUST00000055071.9	463	4	796	0	796	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTGTGGTGGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	103409143	103408425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_103408643_103409090
ENSMUSG00000079018.11_74916866_74919320_1	chr15	-	713	2	ISM	ENSMUSG00000079018.11	ENSMUST00000179762.8	838	4	1342	0	1317	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTCTGTTTTTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	74919320	74916865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_74917460_74919201
ENSMUSG00000079018.11_74916991_74920373_1	chr15	-	669	3	ISM	ENSMUSG00000079018.11	ENSMUST00000179762.8	838	4	289	125	264	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAGTATTCCAAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	74920373	74916990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_74917460_74919201_74919319_74920290
ENSMUSG00000079018.11_74916991_74920637_1	chr15	-	673	4	FSM	ENSMUSG00000079018.11	ENSMUST00000065408.16	844	4	42	129	0	-125	multi-exon	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAGTATTCCAAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	74920637	74916990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_74917460_74919201_74919319_74920290_74920374_74920633
ENSMUSG00000079031.2_87783347_87787342_1	chr12	+	1747	2	FSM	ENSMUSG00000079031.2	ENSMUST00000110149.2	1851	2	0	104	0	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAGACACATTAAAAACGT	NA	NA	NA	NA	NA	NA	NA	NA	87783346	87787342	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_87783537_87785785
ENSMUSG00000079031.2_87783498_87787446_1	chr12	+	1700	2	FSM	ENSMUSG00000079031.2	ENSMUST00000110149.2	1851	2	151	0	151	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAGATTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	87783497	87787446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_87783537_87785785
ENSMUSG00000079036.11_87472939_87478241_1	chr12	-	3174	2	ISM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	12368	0	12368	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	87478241	87472938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87476041_87478169
ENSMUSG00000079036.11_87473175_87480944_1	chr12	-	3116	3	ISM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	9665	236	9665	-236	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCATTTTGTACAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	87480944	87473174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87476041_87478169_87478364_87480888
ENSMUSG00000079036.11_87473280_87485329_1	chr12	-	3209	4	ISM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	5280	341	5280	-341	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACCGGCATTACACCCA	NA	NA	NA	NA	NA	NA	NA	NA	87485329	87473279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166
ENSMUSG00000079036.11_87473447_87487184_1	chr12	-	3151	5	ISM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	3425	508	3425	-508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGTTATCAGGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	87487184	87473446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075
ENSMUSG00000079036.11_87473575_87490598_1	chr12	-	3210	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	11	636	11	-636	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTAAGGATTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	87490598	87473574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ENSMUSG00000079036.11_87473626_87490598_1	chr12	-	3159	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	11	687	11	-687	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATGGTGTCCATGCACA	NA	NA	NA	NA	NA	NA	NA	NA	87490598	87473625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ENSMUSG00000079037.10_131751848_131778823_1	chr2	+	658	3	FSM	ENSMUSG00000079037.10	ENSMUST00000091288.13	2184	3	0	1526	0	-1526	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGTACTACAGGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	131751847	131778823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_131751924_131754114_131754213_131778339
ENSMUSG00000079055.11_81246452_81251762_1	chr12	-	663	4	ISM	ENSMUSG00000079055.11	ENST00000534137.5	2821	6	111110	185	111110	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCACCATCTTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	81251762	81246451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_81246642_81249016_81249293_81250827_81250928_81251665
ENSMUSG00000079055.11_81249171_81361282_1	chr12	-	700	5	ISM	ENSMUSG00000079055.11	ENSMUST00000085238.13	4927	7	18656	4482	1590	-2904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCACGGCTGGGCCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	81361282	81249170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_81249293_81250827_81250928_81251665_81251791_81260839_81260944_81361033
ENSMUSG00000079055.11_81251713_81361498_1	chr12	-	647	3	ISM	ENSMUSG00000079055.11	ENSMUST00000085238.13	4927	7	18440	7024	1374	-5446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCCCAAACTAGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	81361498	81251712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_81251791_81260839_81260944_81361033
ENSMUSG00000079084.13_13248882_13282069_1	chr9	+	680	5	FSM	ENSMUSG00000079084.13	ENST00000680532.1	676	5	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGGTTGTAGACTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	13248881	13282069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_13248988_13262360_13262454_13266811_13266937_13272649_13272821_13281884
ENSMUSG00000079084.13_13248882_13292703_1	chr9	+	2362	9	FSM	ENSMUSG00000079084.13	ENST00000680763.1	2524	9	0	162	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTTTCTCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	13248881	13292703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_13248968_13251695_13252424_13252850_13253056_13262360_13262454_13266811_13266937_13272649_13272821_13281884_13282071_13289700_13290076_13292310
ENSMUSG00000079084.13_13251587_13272708_1	chr9	+	1319	5	ISM	ENSMUSG00000079084.13	ENST00000679960.1	2445	8	-100	20155	-100	-9357	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCAGGCTTGTGGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	13251586	13272708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_13252424_13252850_13253056_13262360_13262454_13266811_13266937_13272649
ENSMUSG00000079084.13_13251775_13292867_1	chr9	+	2356	8	NNC	ENSMUSG00000079084.13	novel	4816	8	NA	NA	88	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGTATTCTGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	13251774	13292867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_13252424_13252850_13253056_13262360_13262454_13266811_13266937_13272649_13272821_13281884_13282071_13289700_13290071_13292310
ENSMUSG00000079084.13_13251775_13292867_2	chr9	+	2356	8	NNC	ENSMUSG00000079084.13	novel	2675	8	NA	NA	88	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGTATTCTGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	13251774	13292867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_13252424_13252850_13253056_13262360_13262449_13266811_13266937_13272649_13272821_13281884_13282071_13289700_13290076_13292310
ENSMUSG00000079084.13_13251775_13292867_3	chr9	+	2361	8	FSM	ENSMUSG00000079084.13	ENST00000679960.1	2445	8	88	-4	88	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGTATTCTGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	13251774	13292867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_13252424_13252850_13253056_13262360_13262454_13266811_13266937_13272649_13272821_13281884_13282071_13289700_13290076_13292310
ENSMUSG00000079092.5_13170711_13179949_1	chr13	-	815	5	NNC	ENSMUSG00000079092.5	novel	842	5	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3019	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAGTCTCAATGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	13179949	13170710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_13170997_13171869_13172046_13173165_13173274_13176718_13176895_13179880
ENSMUSG00000079092.5_13170711_13179949_2	chr13	-	816	5	NNC	ENSMUSG00000079092.5	novel	842	5	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAGTCTCAATGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	13179949	13170710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_13170991_13171869_13172053_13173165_13173274_13176718_13176895_13179880
ENSMUSG00000079104.5_57277222_57285668_1	chr12	+	696	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	24	1000	24	-512	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGATACGGGAGAATATA	NA	NA	NA	NA	NA	NA	NA	NA	57277221	57285668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_57277398_57285148
ENSMUSG00000079104.5_57277277_57285728_1	chr12	+	701	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	79	940	79	-452	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGCCAAGAGAGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	57277276	57285728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_57277398_57285148
ENSMUSG00000079104.5_57277277_57285787_1	chr12	+	760	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	79	881	79	-393	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAGGAACGGAAGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	57277276	57285787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_57277398_57285148
ENSMUSG00000079104.5_57285309_57286181_1	chr12	+	367	2	FSM	ENSMUSG00000079104.5	ENST00000676092.1	476	2	110	-1	110	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATTTTGAAAATAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	57285308	57286181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_57285570_57286075
ENSMUSG00000079108.7_55277333_55294197_1	chr12	+	589	7	ISM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	380	16424	380	-15608	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAGAATTCCGTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	55277332	55294197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164
ENSMUSG00000079108.7_55304306_55309347_1	chr12	+	607	3	ISM	ENSMUSG00000079108.7	ENSMUST00000164243.2	2317	15	18195	458	18195	-458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAAGAAAAGTGCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	55304305	55309347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55304381_55307187_55307284_55308911
ENSMUSG00000079108.7_55307229_55310367_1	chr12	+	1511	2	ISM	ENSMUSG00000079108.7	ENSMUST00000164243.2	2317	15	21118	-562	21118	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCAGGTGCTCGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	55307228	55310367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55307284_55308911
ENSMUSG00000079109.12_143848737_143851621_1	chr5	+	413	3	FSM	ENSMUSG00000079109.12	ENST00000394921.8	413	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATTCACCATCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	143848736	143851621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_143848879_143850219_143850307_143851437
ENSMUSG00000079109.12_143848737_143851621_2	chr5	+	406	3	NNC	ENSMUSG00000079109.12	novel	413	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATTCACCATCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	143848736	143851621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_143848879_143850226_143850307_143851437
ENSMUSG00000079109.12_143848737_143851621_3	chr5	+	407	3	NNC	ENSMUSG00000079109.12	novel	413	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATTCACCATCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	143848736	143851621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_143848879_143850219_143850301_143851437
ENSMUSG00000079109.12_143851436_143862297_1	chr5	+	1052	7	ISM	ENSMUSG00000079109.12	ENST00000644110.1	2262	12	1164	5680	1164	-5680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGGCTCGCAGGACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	143851435	143862297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038
ENSMUSG00000079109.12_143853213_143862462_1	chr5	+	992	6	ISM	ENSMUSG00000079109.12	ENST00000644110.1	2262	12	2941	5515	2941	-5515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTCCCCAGAAGACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	143853212	143862462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038
ENSMUSG00000079109.12_143853265_143862514_1	chr5	+	992	6	ISM	ENSMUSG00000079109.12	ENST00000644110.1	2262	12	2993	5463	2993	-5463	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCCGTCCTCCAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	143853264	143862514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038
ENSMUSG00000079109.12_143853315_143862569_1	chr5	+	997	6	ISM	ENSMUSG00000079109.12	ENST00000644110.1	2262	12	3043	5408	3043	-5408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCAAAGCTCTACCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	143853314	143862569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038
ENSMUSG00000079109.12_143860372_143864991_1	chr5	+	1007	3	ISM	ENSMUSG00000079109.12	ENST00000644110.1	2262	12	10100	2986	10100	-2986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTCCTGGTGGACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	143860371	143864991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_143860451_143862038_143862892_143864916
ENSMUSG00000079109.12_143862210_143866039_1	chr5	+	992	4	ISM	ENSMUSG00000079109.12	ENST00000644110.1	2262	12	11938	1938	11938	-1938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAAAACTGGACCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	143862209	143866039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_143862892_143864916_143865085_143865759_143865861_143865998
ENSMUSG00000079109.12_143862259_143866094_1	chr5	+	998	4	ISM	ENSMUSG00000079109.12	ENST00000644110.1	2262	12	11987	1883	11987	-1883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACAGCCCTGGGGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	143862258	143866094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_143862892_143864916_143865085_143865759_143865861_143865998
ENSMUSG00000079109.12_143862314_143866149_1	chr5	+	998	4	ISM	ENSMUSG00000079109.12	ENST00000644110.1	2262	12	12042	1828	12042	-1828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCCTGTCGGAAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	143862313	143866149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_143862892_143864916_143865085_143865759_143865861_143865998
ENSMUSG00000079109.12_143862426_143867977_1	chr5	+	1049	5	ISM	ENSMUSG00000079109.12	ENST00000644110.1	2262	12	12154	0	12154	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCCCTTGTAGCATAGA	NA	NA	NA	NA	NA	NA	NA	NA	143862425	143867977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ENSMUSG00000079109.12_143862492_143867977_1	chr5	+	983	5	ISM	ENSMUSG00000079109.12	ENST00000644110.1	2262	12	12220	0	12220	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCCCTTGTAGCATAGA	NA	NA	NA	NA	NA	NA	NA	NA	143862491	143867977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ENSMUSG00000079111.4_143389702_143407656_1	chr5	+	1714	5	NNC	ENSMUSG00000079111.4	novel	1829	5	NA	NA	109	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7910	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTATGGTCTTTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	143389701	143407656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_143389802_143398245_143398347_143403804_143403964_143405194_143405448_143406555
ENSMUSG00000079111.4_143389702_143407656_2	chr5	+	1720	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	109	0	109	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTATGGTCTTTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	143389701	143407656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
ENSMUSG00000079144.8_192856052_192857217_1	chr1	+	702	2	FSM	ENSMUSG00000079144.8	ENSMUST00000110831.4	2257	2	164	1391	164	-1389	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGACTCCCCTGCGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	192856051	192857217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_192856089_192856552
ENSMUSG00000079184.11_56905855_56909945_1	chr14	+	251	2	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	150	24942	150	-24942	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGTTCTTCTTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	56905854	56909945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56906022_56909861
ENSMUSG00000079184.11_56928403_56930992_1	chr14	+	228	2	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	22698	3895	22698	-3895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACAGATTTCAATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	56928402	56930992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_56928519_56930880
ENSMUSG00000079197.11_55824898_55828544_2	chr14	-	956	11	NNC	ENSMUSG00000079197.11	novel	962	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1804	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTGTTGTTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	55828544	55824897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_55825017_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827553_55827951_55827985_55828298
ENSMUSG00000079197.11_55824898_55828544_3	chr14	-	960	11	NNC	ENSMUSG00000079197.11	novel	962	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTGTTGTTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	55828544	55824897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_55825017_55825106_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827553_55827951_55827985_55828298
ENSMUSG00000079317.11_165223570_165236136_1	chrX	+	1611	5	NNC	ENSMUSG00000079317.11	novel	1613	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTCATTTGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	165223569	165236136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_165223836_165229786_165229899_165232783_165232934_165233631_165233711_165235132
ENSMUSG00000079317.11_165223570_165236136_3	chrX	+	1609	5	NNC	ENSMUSG00000079317.11	novel	1613	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTCATTTGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	165223569	165236136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_165223836_165229786_165229899_165232783_165232916_165233615_165233711_165235132
ENSMUSG00000079317.11_165223570_165236136_5	chrX	+	1606	5	NNC	ENSMUSG00000079317.11	novel	1613	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTCATTTGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	165223569	165236136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_165223836_165229786_165229899_165232783_165232929_165233631_165233711_165235132
ENSMUSG00000079334.9_107459733_107461249_1	chr9	+	1437	2	FSM	ENSMUSG00000079334.9	ENST00000443842.1	1378	2	2	-61	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACAGTTTATTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	107459732	107461249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107460169_107460248
ENSMUSG00000079334.9_107459789_107461249_1	chr9	+	1376	2	NNC	ENSMUSG00000079334.9	novel	1378	2	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2019	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACAGTTTATTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	107459788	107461249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_107460169_107460253
ENSMUSG00000079343.5_124602111_124603766_1	chr6	-	861	2	ISM	ENSMUSG00000079343.5	ENST00000402681.7	2239	10	9362	228	9278	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCCTCCAGGGCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	124603766	124602110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124602922_124603716
ENSMUSG00000079343.5_124602249_124605328_1	chr6	-	956	4	ISM	ENSMUSG00000079343.5	ENST00000402681.7	2239	10	7800	366	7716	-366	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGCTGGGTTGGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124605328	124602248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124602922_124603716_124603792_124604449_124604579_124605249
ENSMUSG00000079343.5_124602526_124607026_1	chr6	-	864	6	ISM	ENSMUSG00000079343.5	ENST00000402681.7	2239	10	6102	643	6018	-643	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACAACCTCTCACCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	124607026	124602525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124602922_124603716_124603792_124604449_124604579_124605249_124605329_124605712_124605829_124606957
ENSMUSG00000079343.5_124602656_124608022_1	chr6	-	865	7	ISM	ENSMUSG00000079343.5	ENST00000402681.7	2239	10	5106	773	5022	-773	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTGGAAGGAAGACGATGA	NA	NA	NA	NA	NA	NA	NA	NA	124608022	124602655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124602922_124603716_124603792_124604449_124604579_124605249_124605329_124605712_124605829_124606957_124607112_124607976
ENSMUSG00000079343.5_124602701_124608080_1	chr6	-	878	7	ISM	ENSMUSG00000079343.5	ENST00000402681.7	2239	10	5048	818	4964	-818	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGCCCAGAGGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	124608080	124602700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124602922_124603716_124603792_124604449_124604579_124605249_124605329_124605712_124605829_124606957_124607112_124607976
ENSMUSG00000079343.5_124602844_124609076_1	chr6	-	887	8	ISM	ENSMUSG00000079343.5	ENST00000402681.7	2239	10	4052	961	3968	-961	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCAAGTCTTCTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	124609076	124602843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124602922_124603716_124603792_124604449_124604579_124605249_124605329_124605712_124605829_124606957_124607112_124607976_124608177_124609020
ENSMUSG00000079343.5_124602903_124609125_1	chr6	-	877	8	ISM	ENSMUSG00000079343.5	ENST00000402681.7	2239	10	4003	1020	3919	-1020	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTTTCAAGTGCAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	124609125	124602902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124602922_124603716_124603792_124604449_124604579_124605249_124605329_124605712_124605829_124606957_124607112_124607976_124608177_124609020
ENSMUSG00000079343.5_124603717_124612086_1	chr6	-	992	8	ISM	ENSMUSG00000079343.5	ENST00000402681.7	2239	10	1042	1834	958	-1834	internal_fragment	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATCTGGGCTGTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	124612086	124603716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124603792_124604449_124604579_124605249_124605329_124605712_124605829_124606957_124607112_124607976_124608177_124609020_124609147_124611973
ENSMUSG00000079343.5_124604449_124612086_1	chr6	-	918	7	ISM	ENSMUSG00000079343.5	ENST00000402681.7	2239	10	1042	2566	958	-2566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTTCTTCTACCAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	124612086	124604448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124604579_124605249_124605329_124605712_124605829_124606957_124607112_124607976_124608177_124609020_124609147_124611973
ENSMUSG00000079343.5_124605250_124613044_1	chr6	-	912	7	ISM	ENSMUSG00000079343.5	ENST00000402681.7	2239	10	84	3367	0	-3367	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTGTCTCTTCAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	124613044	124605249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_124605329_124605712_124605829_124606957_124607112_124607976_124608177_124609020_124609147_124611973_124612152_124612985
ENSMUSG00000079426.14_113355154_113359035_1	chr6	+	247	3	ISM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	78	8374	0	-6941	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCACCAGGGATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	113355153	113359035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113355170_113357686_113357806_113358923
ENSMUSG00000079426.14_113355154_113361138_1	chr6	+	343	4	ISM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	78	6271	0	-4838	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGACCTGTGCTCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	113355153	113361138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042
ENSMUSG00000079426.14_113357768_113362498_1	chr6	+	294	4	ISM	ENSMUSG00000079426.14	ENSMUST00000204802.2	794	6	2237	3478	2237	-3478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAACACAAGCTGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	113357767	113362498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_113357806_113358923_113359036_113361042_113361139_113362450
ENSMUSG00000079429.10_88156021_88158152_1	chr1	+	199	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	52	29600	52	-29600	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGCCATTGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	88156020	88158152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88156131_88158063
ENSMUSG00000079429.10_88156065_88158368_1	chr1	+	219	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	96	29384	96	-29384	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGGCCAGTGAGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	88156064	88158368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88156131_88158063_88158196_88158347
ENSMUSG00000079429.10_88158445_88161077_1	chr1	+	204	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	2476	26675	2476	-26675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACCTGGAGGACAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	88158444	88161077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88158511_88159965_88160065_88161038
ENSMUSG00000079429.10_88161083_88161809_1	chr1	+	194	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	5114	25943	5114	-25943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCCCTGCTGCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	88161082	88161809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88161191_88161723
ENSMUSG00000079429.10_88165258_88166657_1	chr1	+	210	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	9289	21095	9289	-21095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCGAGGCACTGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	88165257	88166657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88165315_88165566_88165678_88166615
ENSMUSG00000079429.10_88166616_88168425_1	chr1	+	214	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	10647	19327	10647	-19327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGGCCGGGGGATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	88166615	88168425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88166764_88167840_88167882_88168400
ENSMUSG00000079429.10_88166682_88168475_1	chr1	+	198	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	10713	19277	10713	-19277	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTGCTCCTTCCATGGC	NA	NA	NA	NA	NA	NA	NA	NA	88166681	88168475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88166764_88167840_88167882_88168400
ENSMUSG00000079429.10_88169328_88170427_1	chr1	+	202	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	13359	17325	13359	-17325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAAGACAGTGTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	88169327	88170427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88169373_88170125_88170246_88170390
ENSMUSG00000079429.10_88171738_88173738_1	chr1	+	220	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	15769	14014	15769	-14014	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTTCTCCCGTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	88171737	88173738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88171806_88172665_88172789_88173709
ENSMUSG00000079429.10_88174912_88176328_1	chr1	+	206	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	18943	11424	18943	-11424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCATCTCCATCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	88174911	88176328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88174967_88175469_88175566_88176273
ENSMUSG00000079429.10_88176274_88177548_1	chr1	+	229	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	20305	10204	20305	-10204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAGAAGAGGCAGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	88176273	88177548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88176379_88177424
ENSMUSG00000079429.10_88177511_88179027_1	chr1	+	218	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	21542	8725	21542	-8725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGCCATGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	88177510	88179027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88177549_88177986_88178106_88178966
ENSMUSG00000079429.10_88180056_88182603_1	chr1	+	181	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	24087	5149	24087	-5149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTGAGAATGTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	88180055	88182603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88180213_88182579
ENSMUSG00000079429.10_88180102_88182666_1	chr1	+	198	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	24133	5086	24133	-5086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTTCACTGCCAAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	88180101	88182666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88180213_88182579
ENSMUSG00000079429.10_88180154_88182715_1	chr1	+	195	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	24185	5037	24185	-5037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCGCTGTGGACCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	88180153	88182715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88180213_88182579
ENSMUSG00000079429.10_88182627_88182906_1	chr1	+	208	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	26658	4846	26658	-4846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCAGCAGCCATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	88182626	88182906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88182740_88182811
ENSMUSG00000079429.10_88182812_88183313_1	chr1	+	243	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	26843	4439	26843	-4439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGGAGCAGGCCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	88182811	88183313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88183006_88183264
ENSMUSG00000079429.10_88182884_88183343_1	chr1	+	201	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	26915	4409	26915	-4409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTCCCTGCTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	88182883	88183343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88183006_88183264
ENSMUSG00000079429.10_88182938_88183390_1	chr1	+	194	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	26969	4362	26969	-4362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGGCCAGGTGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	88182937	88183390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88183006_88183264
ENSMUSG00000079429.10_88183363_88184169_1	chr1	+	197	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	27394	3583	27394	-3583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGATGCTGGAGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	88183362	88184169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88183403_88183778_88183888_88184121
ENSMUSG00000079429.10_88184124_88184392_1	chr1	+	168	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	28155	3360	28155	-3360	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGGAGAAGTGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	88184123	88184392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88184272_88184372
ENSMUSG00000079429.10_88184159_88184462_1	chr1	+	203	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	28190	3290	28190	-3290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCACCAAGGTCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	88184158	88184462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88184272_88184372
ENSMUSG00000079429.10_88184204_88184519_1	chr1	+	215	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	28235	3233	28235	-3233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTCTAAGCAGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	88184203	88184519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88184272_88184372
ENSMUSG00000079429.10_88184433_88185528_1	chr1	+	220	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	28464	2224	28464	-2224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGGCTGGGTCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	88184432	88185528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_88184556_88185431
ENSMUSG00000079435.10_133486839_133488805_1	chrX	+	405	4	ISM	ENSMUSG00000079435.10	ENSMUST00000113211.8	483	5	436	0	436	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTTTTTCTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	133486838	133488805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_133486933_133487259_133487328_133488199_133488323_133488685
ENSMUSG00000079442.13_32477151_32484053_1	chr2	+	428	4	ISM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	44	5657	44	-5034	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGGGTTCAGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	32477150	32484053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001
ENSMUSG00000079442.13_32484038_32485719_1	chr2	+	391	2	ISM	ENSMUSG00000079442.13	ENSMUST00000179989.2	2826	5	6401	3368	6401	-3368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTCAGCACCGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	32484037	32485719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32484415_32485705
ENSMUSG00000079442.13_32484085_32485786_1	chr2	+	411	2	ISM	ENSMUSG00000079442.13	ENSMUST00000179989.2	2826	5	6448	3301	6448	-3301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGATGGTCAGCGATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	32484084	32485786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32484415_32485705
ENSMUSG00000079442.13_32484167_32485813_1	chr2	+	356	2	ISM	ENSMUSG00000079442.13	ENSMUST00000179989.2	2826	5	6530	3274	6530	-3274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGACCGGCGCCCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	32484166	32485813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32484415_32485705
ENSMUSG00000079442.13_32484288_32487201_1	chr2	+	411	3	ISM	ENSMUSG00000079442.13	ENSMUST00000179989.2	2826	5	6651	1886	6651	-1886	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGCCAAGTAGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	32484287	32487201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32484415_32485705_32485814_32487025
ENSMUSG00000079442.13_32485746_32487357_1	chr2	+	400	2	ISM	ENSMUSG00000079442.13	ENSMUST00000179989.2	2826	5	8109	1730	8109	-1730	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGGAGGAACCTCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	32485745	32487357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32485814_32487025
ENSMUSG00000079442.13_32485797_32487410_1	chr2	+	402	2	ISM	ENSMUSG00000079442.13	ENSMUST00000179989.2	2826	5	8160	1677	8160	-1677	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACCACCCCTGCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	32485796	32487410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_32485814_32487025
ENSMUSG00000079444.10_47998109_48005161_1	chr17	-	1178	7	FSM	ENSMUSG00000079444.10	ENST00000335515.10	1177	7	0	-1	0	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCACTTTCCCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	48005161	47998108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_47998125_48000237_48000412_48000982_48001187_48001498_48001637_48002281_48002390_48003256_48003405_48004771
ENSMUSG00000079444.10_47999442_48000415_1	chr17	-	532	2	ISM	ENSMUSG00000096549.10	ENSMUST00000113299.6	990	5	1986	0	1218	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGCGGCCTGGAGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	48000415	47999441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_47999765_48000206
ENSMUSG00000079444.10_47999840_48001105_1	chr17	-	562	3	ISM	ENSMUSG00000096549.10	ENST00000394259.5	778	4	528	0	528	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCAACCCTGGCCCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	48001105	47999839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_48000074_48000206_48000412_48000982
ENSMUSG00000079444.10_47999955_48001540_1	chr17	-	570	4	FSM	ENSMUSG00000096549.10	ENST00000394259.5	778	4	93	115	93	-115	multi-exon	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCAGGCGGGGGAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	48001540	47999954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_48000074_48000206_48000412_48000982_48001187_48001498
ENSMUSG00000079444.10_47999955_48001598_1	chr17	-	628	4	FSM	ENSMUSG00000096549.10	ENST00000394259.5	778	4	35	115	35	-115	multi-exon	FALSE	canonical	NA	NA	NA	NA	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCAGGCGGGGGAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	48001598	47999954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_48000074_48000206_48000412_48000982_48001187_48001498
ENSMUSG00000079444.10_47999955_48001631_1	chr17	-	661	4	FSM	ENSMUSG00000096549.10	ENST00000394259.5	778	4	2	115	2	-115	multi-exon	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCAGGCGGGGGAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	48001631	47999954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_48000074_48000206_48000412_48000982_48001187_48001498
ENSMUSG00000079444.10_48000237_48005161_1	chr17	-	1160	6	ISM	ENSMUSG00000079444.10	ENSMUST00000143789.5	2721	9	219	2573	0	-2127	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAGTAGCGGAAGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	48005161	48000236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_48000412_48000982_48001187_48001498_48001637_48002281_48002390_48003259_48003405_48004771
ENSMUSG00000079471.5_45912180_45912993_1	chr17	-	521	2	FSM	ENSMUSG00000079471.5	ENSMUST00000178858.3	804	2	0	283	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCCTAGCAGGCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	45912993	45912179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_45912612_45912904
ENSMUSG00000079477.10_87977499_87982100_1	chr6	-	269	3	ISM	ENSMUSG00000079477.10	ENSMUST00000095048.6	1275	6	14665	577	14665	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTACAATGAATTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	87982100	87977498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_87977513_87981152_87981282_87981974
ENSMUSG00000079478.10_5780335_5781354_1	chr19	-	492	2	ISM	ENSMUSG00000079478.10	ENST00000526877.1	704	3	267	79	267	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGTTTGTTCTTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	5781354	5780334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5780741_5781268
ENSMUSG00000079478.10_5780335_5781552_1	chr19	-	577	3	ISM	ENSMUSG00000079478.10	ENSMUST00000159693.2	705	4	208	0	69	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGTTTGTTCTTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	5781552	5780334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5780741_5781268_5781354_5781466
ENSMUSG00000079478.10_5780439_5781655_2	chr19	-	571	3	ISM	ENSMUSG00000079478.10	ENSMUST00000025885.6	699	4	100	108	-34	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCCGAGGCCCTAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	5781655	5780438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5780741_5781268_5781354_5781471
ENSMUSG00000079484.13_30164526_30171084_1	chr2	+	468	6	ISM	ENSMUSG00000079484.13	ENST00000421063.6	769	8	7607	65	7607	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCCAGGCCTACACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	30164525	30171084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30164558_30164687_30164736_30167014_30167094_30169966_30170096_30170182_30170300_30171021
ENSMUSG00000079508.9_93410920_93460699_3	chrX	+	1042	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113895.2	1173	9	131	0	131	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCTGCTTTCTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	93410919	93460699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_93411092_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
ENSMUSG00000079550.10_59160412_59168171_1	chr1	-	611	5	ISM	ENSMUSG00000079550.10	ENST00000409474.8	1549	13	20642	1	20642	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTGTCCTGCTTAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	59168171	59160411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59160604_59162601_59162737_59163789_59163899_59164681_59164776_59168090
ENSMUSG00000079550.10_59160532_59169173_1	chr1	-	581	6	ISM	ENSMUSG00000079550.10	ENST00000409474.8	1549	13	19640	121	19640	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTGTGAATGACAACTT	NA	NA	NA	NA	NA	NA	NA	NA	59169173	59160531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59160604_59162601_59162737_59163789_59163899_59164681_59164776_59168090_59168172_59169083
ENSMUSG00000079550.10_59162657_59183900_1	chr1	-	750	8	ISM	ENSMUSG00000079550.10	ENST00000428900.6	1481	13	4913	2246	4913	-2246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTCGGAAAAACGCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	59183900	59162656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59162737_59163789_59163899_59164681_59164776_59168090_59168172_59169083_59169255_59171080_59171123_59182894_59182980_59183812
ENSMUSG00000079550.10_59162682_59178904_1	chr1	-	565	6	ISM	ENSMUSG00000079550.10	ENST00000409474.8	1549	13	9909	2271	9909	-2271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTAACACGAGCTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	59178904	59162681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59162737_59163789_59163899_59164681_59164776_59168090_59168172_59169083_59169255_59178849
ENSMUSG00000079550.10_59163851_59182917_1	chr1	-	527	6	ISM	ENSMUSG00000079550.10	ENST00000409474.8	1549	13	5896	3440	5896	-3440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGCTGTACACGCCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	59182917	59163850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59163899_59164681_59164776_59168090_59168172_59169083_59169255_59178849_59178960_59182894
ENSMUSG00000079550.10_59164681_59185573_1	chr1	-	744	7	ISM	ENSMUSG00000079550.10	ENST00000428900.6	1481	13	3240	4270	3240	-4270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTTCAGAAGTCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	59185573	59164680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59164776_59168090_59168172_59169083_59169255_59171080_59171123_59182894_59182980_59183812_59184010_59185500
ENSMUSG00000079550.10_59164743_59183876_1	chr1	-	544	6	ISM	ENSMUSG00000079550.10	ENST00000409474.8	1549	13	4937	4332	4937	-4332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGACGTGAGTATCACTAC	NA	NA	NA	NA	NA	NA	NA	NA	59183876	59164742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59164776_59168090_59168172_59169083_59169255_59178849_59178960_59182894_59182980_59183812
ENSMUSG00000079550.10_59168087_59185992_1	chr1	-	739	7	ISM	ENSMUSG00000079550.10	ENST00000428900.6	1481	13	2821	7676	2821	-7676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTTGTCTTTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	59185992	59168086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59168172_59169083_59169255_59171080_59171123_59182894_59182980_59183812_59184010_59185500_59185573_59185905
ENSMUSG00000079550.10_59169083_59188255_1	chr1	-	737	7	ISM	ENSMUSG00000079550.10	ENST00000428900.6	1481	13	558	8672	558	-8672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCATGCTCTGCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	59188255	59169082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59169255_59171080_59171123_59182894_59182980_59183812_59184010_59185500_59185573_59185905_59185992_59188172
ENSMUSG00000079550.10_59169194_59188725_1	chr1	-	671	8	ISM	ENSMUSG00000079550.10	ENST00000428900.6	1481	13	88	8783	88	-8783	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCTGCAGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	59188725	59169193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59169255_59171080_59171123_59182894_59182980_59183812_59184010_59185500_59185573_59185905_59185992_59188172_59188255_59188679
ENSMUSG00000079550.10_59169236_59188805_1	chr1	-	709	8	ISM	ENSMUSG00000079550.10	ENST00000428900.6	1481	13	8	8825	8	-8825	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCTCTGTCGCAGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	59188805	59169235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59169255_59171080_59171123_59182894_59182980_59183812_59184010_59185500_59185573_59185905_59185992_59188172_59188255_59188679
ENSMUSG00000079550.10_59169241_59185957_1	chr1	-	530	6	ISM	ENSMUSG00000079550.10	ENST00000409474.8	1549	13	2856	8830	2856	-8830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGCGCCTCTGTCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	59185957	59169240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_59169255_59178849_59178960_59182894_59182980_59183812_59184010_59185500_59185573_59185905
ENSMUSG00000079553.12_34094786_34109608_1	chr17	-	2171	11	NNC	ENSMUSG00000079553.12	novel	2181	11	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGATTCCCTTGCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	34109608	34094785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104828_34104877_34105549_34105650_34105737_34105876_34109451
ENSMUSG00000079553.12_34094786_34109608_2	chr17	-	2170	11	NNC	ENSMUSG00000079553.12	novel	2181	11	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGATTCCCTTGCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	34109608	34094785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104186_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ENSMUSG00000079553.12_34094786_34109608_3	chr17	-	2172	11	NNC	ENSMUSG00000079553.12	novel	2181	11	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGATTCCCTTGCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	34109608	34094785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104872_34105549_34105650_34105737_34105876_34109451
ENSMUSG00000079553.12_34094786_34109608_4	chr17	-	2177	11	FSM	ENSMUSG00000079553.12	ENSMUST00000173492.9	2357	11	27	153	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGATTCCCTTGCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	34109608	34094785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ENSMUSG00000079553.12_34094786_34109608_5	chr17	-	2175	11	NNC	ENSMUSG00000079553.12	novel	2181	11	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGATTCCCTTGCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	34109608	34094785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101416_34102068_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ENSMUSG00000079555.3_34311224_34323476_1	chr5	-	673	3	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	3395	0	3395	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTTTTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34323476	34311223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34311451_34320866_34321096_34323259
ENSMUSG00000079555.3_34311224_34323542_1	chr5	-	739	3	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	3329	0	3329	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTTTTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34323542	34311223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34311451_34320866_34321096_34323259
ENSMUSG00000079555.3_34320891_34324783_1	chr5	-	680	3	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	2088	9667	2088	-9667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGCTATTGCTTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	34324783	34320890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34321096_34323259_34323700_34324748
ENSMUSG00000079555.3_34320948_34324834_1	chr5	-	674	3	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	2037	9724	2037	-9724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTCCAAACTGAATAATGA	NA	NA	NA	NA	NA	NA	NA	NA	34324834	34320947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34321096_34323259_34323700_34324748
ENSMUSG00000079555.3_34321020_34324914_1	chr5	-	682	3	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	1957	9796	1957	-9796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAATTGAAACAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	34324914	34321019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34321096_34323259_34323700_34324748
ENSMUSG00000079555.3_34323298_34325035_1	chr5	-	689	2	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	1836	12074	1836	-12074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTCCCATCGACACCAA	NA	NA	NA	NA	NA	NA	NA	NA	34325035	34323297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34323700_34324748
ENSMUSG00000079555.3_34323401_34325111_1	chr5	-	662	2	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	1760	12177	1760	-12177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTAGAGAGTTTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	34325111	34323400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34323700_34324748
ENSMUSG00000079555.3_34323609_34325321_1	chr5	-	664	2	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	1550	12385	1550	-12385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTGCCTGCTGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	34325321	34323608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34323700_34324748
ENSMUSG00000079555.3_34325276_34326871_1	chr5	-	650	2	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	0	14052	0	-14052	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAACTAGCTACAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	34326871	34325275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_34325788_34326733
ENSMUSG00000079557.12_33885561_33905633_1	chr17	-	1812	5	NNC	ENSMUSG00000079557.12	novel	3400	6	NA	NA	31981	19125	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCCAGTATCCTAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	33905633	33885560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33885660_33887958_33888053_33889048_33889108_33896247_33896415_33904240
ENSMUSG00000079557.12_33910629_33937565_1	chr17	-	969	4	FSM	ENSMUSG00000079557.12	ENST00000381035.8	1192	4	107	116	49	-116	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTGCGTTACTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	33937565	33910628	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_33911128_33921986_33922183_33928718_33928947_33937519
ENSMUSG00000079557.12_33910658_33928868_1	chr17	-	1076	4	ISM	ENSMUSG00000079557.12	ENSMUST00000173015.8	1418	5	8746	169	8746	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGCCCGTTGGACTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	33928868	33910657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_33911178_33915010_33915221_33921986_33922183_33928718
ENSMUSG00000079557.12_33910700_33937619_1	chr17	-	952	4	FSM	ENSMUSG00000079557.12	ENST00000381035.8	1192	4	53	187	0	-187	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGACACCTTTTGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	33937619	33910699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_33911128_33921986_33922183_33928718_33928947_33937519
ENSMUSG00000079557.12_33910813_33937666_1	chr17	-	886	4	FSM	ENSMUSG00000079557.12	ENST00000381035.8	1192	4	6	300	6	-300	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTGAACATATTTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	33937666	33910812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_33911128_33921986_33922183_33928718_33928947_33937519
ENSMUSG00000079560.14_52147401_52149239_1	chr6	-	461	2	ISM	ENSMUSG00000079560.14	ENST00000317201.7	2759	5	28714	1356	28714	-1356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAACAGTGTCCCATATG	NA	NA	NA	NA	NA	NA	NA	NA	52149239	52147400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_52147723_52149100
ENSMUSG00000079560.14_52147591_52149440_1	chr6	-	472	2	ISM	ENSMUSG00000079560.14	ENST00000317201.7	2759	5	28513	1546	28513	-1546	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGGTGGAGATGGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	52149440	52147590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_52147723_52149100
ENSMUSG00000079560.14_52147658_52149516_1	chr6	-	481	2	ISM	ENSMUSG00000079560.14	ENST00000317201.7	2759	5	28437	1613	28437	-1613	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACGAGCGCGCAGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	52149516	52147657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_52147723_52149100
ENSMUSG00000079560.14_52149239_52160729_1	chr6	-	553	2	ISM	ENSMUSG00000079560.14	ENST00000317201.7	2759	5	17224	3194	17224	-3194	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCAACAGCAACCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	52160729	52149238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_52149750_52160687
ENSMUSG00000079560.14_52149401_52165050_1	chr6	-	479	3	ISM	ENSMUSG00000079560.14	ENST00000317201.7	2759	5	12903	3356	12903	-3356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCCTCCTAGTCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	52165050	52149400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_52149750_52160687_52160771_52165003
ENSMUSG00000079562.8_33492905_33529165_1	chr5	+	1123	8	ISM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	52	1475	-12	-1442	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCAGGGCTGGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	33492904	33529165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957
ENSMUSG00000079562.8_33492905_33529655_1	chr5	+	1156	9	FSM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	52	985	-12	-952	multi-exon	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAAGAAGTCTTCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	33492904	33529655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
ENSMUSG00000079562.8_33492905_33530351_1	chr5	+	1648	7	FSM	ENSMUSG00000079562.8	ENST00000514708.5	1892	7	-12	256	-12	-256	multi-exon	TRUE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTGCTTTGAGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	33492904	33530351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_33492990_33515783_33515967_33517695_33517900_33525981_33526091_33527774_33527909_33528961_33529154_33529610
ENSMUSG00000079562.8_33515864_33529754_1	chr5	+	1090	8	ISM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	23011	886	22947	-853	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCATGCCCTCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	33515863	33529754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
ENSMUSG00000079562.8_33515909_33529893_1	chr5	+	1184	8	ISM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	23056	747	22992	-714	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGCGTTTGATTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	33515908	33529893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
ENSMUSG00000079562.8_33517694_33530473_1	chr5	+	1504	5	ISM	ENSMUSG00000079562.8	ENST00000514708.5	1892	7	24777	134	24777	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAAAATAAGTACTGACGG	NA	NA	NA	NA	NA	NA	NA	NA	33517693	33530473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33517900_33525981_33526091_33527774_33527909_33528961_33529154_33529610
ENSMUSG00000079562.8_33517755_33530640_1	chr5	+	1610	5	ISM	ENSMUSG00000079562.8	ENST00000514708.5	1892	7	24838	-33	24838	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGAGGTGTTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	33517754	33530640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33517900_33525981_33526091_33527774_33527909_33528961_33529154_33529610
ENSMUSG00000079562.8_33520037_33530072_1	chr5	+	1103	6	ISM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	27184	568	27120	-535	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTGCTAGTGATGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	33520036	33530072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
ENSMUSG00000079562.8_33525980_33530351_1	chr5	+	1182	4	ISM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	33127	289	33063	-256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTGCTTTGAGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	33525979	33530351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33526091_33527774_33527909_33528957_33529154_33529610
ENSMUSG00000079562.8_33527773_33530473_1	chr5	+	1195	3	ISM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	34920	167	34856	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAAAATAAGTACTGACGG	NA	NA	NA	NA	NA	NA	NA	NA	33527772	33530473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_33527909_33528957_33529154_33529610
ENSMUSG00000079580.10_29745465_29769136_1	chr17	-	861	2	FSM	ENSMUSG00000079580.10	ENST00000652639.1	797	2	-63	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGAGGGCCTCATGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	29769136	29745464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_29745731_29768541
ENSMUSG00000079588.4_40845258_40894207_1	chr1	+	452	3	FSM	ENSMUSG00000079588.4	ENST00000488134.5	452	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCACCACACTCCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	40845257	40894207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_40845359_40846781_40846881_40893955
ENSMUSG00000079588.4_40845258_40894207_2	chr1	+	447	3	NNC	ENSMUSG00000079588.4	novel	452	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCACCACACTCCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	40845257	40894207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_40845354_40846781_40846881_40893955
ENSMUSG00000079588.4_40845258_40894207_3	chr1	+	450	3	NNC	ENSMUSG00000079588.4	novel	452	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	3798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCACCACACTCCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	40845257	40894207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_40845359_40846781_40846881_40893957
ENSMUSG00000079588.4_40845258_40894207_4	chr1	+	444	3	NNC	ENSMUSG00000079588.4	novel	452	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3615	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCACCACACTCCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	40845257	40894207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_40845359_40846789_40846881_40893955
ENSMUSG00000079614.5_67920272_67926263_1	chr18	+	547	5	ISM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	12326	2294	12227	600	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTTGTTGCATGCACA	NA	NA	NA	NA	NA	NA	NA	NA	67920271	67926263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ENSMUSG00000079614.5_67921829_67926406_1	chr18	+	570	4	ISM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	13883	2151	13784	743	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTACTAGTCAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	67921828	67926406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_67921903_67922409_67922568_67924933_67925085_67926219
ENSMUSG00000079614.5_67922509_67926562_1	chr18	+	553	3	ISM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	14563	1995	14464	899	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTTTGGAGAATATAGG	NA	NA	NA	NA	NA	NA	NA	NA	67922508	67926562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_67922568_67924933_67925085_67926219
ENSMUSG00000079614.5_67925014_67926702_1	chr18	+	554	2	ISM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	17068	1855	16969	1039	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGCTCTATAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	67925013	67926702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_67925085_67926219
ENSMUSG00000079625.3_32224809_32226411_1	chr16	+	103	2	ISM	ENSMUSG00000079625.3	ENST00000454715.5	521	3	127	416	127	-416	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTCTGGAGTAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	32224808	32226411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_32224855_32226354
ENSMUSG00000079625.3_32226470_32226738_1	chr16	+	144	2	ISM	ENSMUSG00000079625.3	ENST00000454715.5	521	3	1788	89	1788	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTATCAGCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	32226469	32226738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_32226525_32226649
ENSMUSG00000079641.4_36346273_36348811_1	chrX	-	268	3	FSM	ENSMUSG00000079641.4	ENSMUST00000115231.4	612	3	244	100	244	-100	multi-exon	FALSE	canonical	NA	NA	NA	NA	2989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGACTCTTCGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	36348811	36346272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_36346403_36347637_36347742_36348777
ENSMUSG00000079641.4_36346282_36347711_1	chrX	-	194	2	NNC	ENSMUSG00000079641.4	novel	612	3	NA	NA	1344	-109	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAAACCTGGAGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	36347711	36346281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_36346403_36347638
ENSMUSG00000079641.4_36346350_36348839_1	chrX	-	219	3	FSM	ENSMUSG00000079641.4	ENSMUST00000115231.4	612	3	216	177	216	-177	multi-exon	FALSE	canonical	NA	NA	NA	NA	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACACAATGGCAAGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	36348839	36346349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_36346403_36347637_36347742_36348777
ENSMUSG00000079641.4_36346384_36348909_1	chrX	-	255	3	FSM	ENSMUSG00000079641.4	ENSMUST00000115231.4	612	3	146	211	146	-211	multi-exon	FALSE	canonical	NA	NA	NA	NA	3046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGGAGGAGAACGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	36348909	36346383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_36346403_36347637_36347742_36348777
ENSMUSG00000079658.10_16712991_16715999_1	chr1	-	802	2	ISM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	11267	0	11109	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGTGTTTTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	16715999	16712990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_16713703_16715909
ENSMUSG00000079658.10_16713134_16727242_1	chr1	-	793	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	24	143	0	-143	multi-exon	TRUE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTGAGCATTACTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	16727242	16713133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
ENSMUSG00000080115.4_126869008_126876969_2	chr10	-	409	2	FSM	ENSMUSG00000080115.4	ENST00000548256.5	410	2	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTACCTTCCCGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	126876969	126869007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_126869300_126876852
ENSMUSG00000080268.5_5095920_5097512_1	chr19	+	636	6	ISM	ENSMUSG00000080268.5	ENST00000425825.6	1175	9	0	2429	0	-2429	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCTTCCACTCAAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	5095919	5097512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419
ENSMUSG00000080268.5_5096422_5099651_1	chr19	+	642	7	NNC	ENSMUSG00000080268.5	novel	1175	9	NA	NA	502	-290	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCCATCCCTGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	5096421	5099651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099025_5099075_5099521
ENSMUSG00000080268.5_5096422_5099941_1	chr19	+	1010	7	ISM	ENSMUSG00000080268.5	ENSMUST00000116567.4	1388	10	5040	4	502	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGGCTGATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	5096421	5099941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
ENSMUSG00000080268.5_5096674_5099819_1	chr19	+	691	6	ISM	ENSMUSG00000080268.5	ENST00000425825.6	1175	9	754	122	754	-122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTTGGGCCTTGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	5096673	5099819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099075_5099521
ENSMUSG00000080268.5_5096841_5099819_1	chr19	+	609	5	ISM	ENSMUSG00000080268.5	ENST00000425825.6	1175	9	921	122	921	-122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTTGGGCCTTGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	5096840	5099819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5096940_5097419_5097513_5098536_5098602_5099020_5099075_5099521
ENSMUSG00000080268.5_5097419_5099941_1	chr19	+	633	4	ISM	ENSMUSG00000080268.5	ENST00000425825.6	1175	9	1499	0	1499	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGGCTGATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	5097418	5099941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5097513_5098536_5098602_5099020_5099075_5099521
ENSMUSG00000080268.5_5098536_5099941_1	chr19	+	539	3	NNC	ENSMUSG00000080268.5	novel	1175	9	NA	NA	2616	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	329	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGGCTGATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	5098535	5099941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_5098602_5099020_5099075_5099522
ENSMUSG00000081534.4_97682236_97690279_1	chr15	+	2242	3	FSM	ENSMUSG00000081534.4	ENSMUST00000117892.2	2536	3	0	294	0	-291	multi-exon	TRUE	canonical	NA	NA	NA	NA	3963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGAGATCTTATTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	97682235	97690279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_97682498_97687783_97687952_97688467
ENSMUSG00000081534.4_97682370_97690406_1	chr15	+	2235	3	FSM	ENSMUSG00000081534.4	ENSMUST00000117892.2	2536	3	134	167	134	-164	multi-exon	FALSE	canonical	NA	NA	NA	NA	5867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGACAAGGGACTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	97682369	97690406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_97682498_97687783_97687952_97688467
ENSMUSG00000081534.4_97682370_97690573_1	chr15	+	2402	3	FSM	ENSMUSG00000081534.4	ENSMUST00000117892.2	2536	3	134	0	134	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTTTTTTTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	97682369	97690573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_97682498_97687783_97687952_97688467
ENSMUSG00000081534.4_97687833_97690279_1	chr15	+	448	3	FSM	ENSMUSG00000081534.4	ENST00000442892.2	783	3	44	291	44	-291	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGAGATCTTATTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	97687832	97690279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_97687952_97688467_97688618_97690100
ENSMUSG00000081534.4_97688505_97690397_1	chr15	+	410	2	ISM	ENSMUSG00000081534.4	ENST00000442892.2	783	3	716	173	716	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAGCCAAGGAAGGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	97688504	97690397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_97688618_97690100
ENSMUSG00000081534.4_97688557_97690450_1	chr15	+	411	2	ISM	ENSMUSG00000081534.4	ENST00000442892.2	783	3	768	120	768	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTCCCCAGCCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	97688556	97690450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_97688618_97690100
ENSMUSG00000082082.2_145174456_145177304_1	chr4	+	1390	2	ISM	ENSMUSG00000082082.2	ENSMUST00000120870.2	1575	3	1146	154	1146	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGACAATCTAAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	145174455	145177304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_145174578_145176036
ENSMUSG00000082082.2_145174540_145177458_1	chr4	+	1460	2	ISM	ENSMUSG00000082082.2	ENSMUST00000120870.2	1575	3	1230	0	1230	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTCAAATATATTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	145174539	145177458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_145174578_145176036
ENSMUSG00000082286.12_3076112_3081004_1	chr11	+	1129	7	FSM	ENSMUSG00000082286.12	ENSMUST00000119128.9	1235	7	106	0	106	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTCGGTTGTGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	3076111	3081004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_3076179_3077478_3077645_3078928_3079166_3079381_3079521_3079764_3079912_3080152_3080314_3080792
ENSMUSG00000082740.2_150311331_150311688_1	chr2	-	281	2	FSM	ENSMUSG00000082740.2	ENST00000590964.5	542	2	207	54	207	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATTGTACCTCAATATG	NA	NA	NA	NA	NA	NA	NA	NA	150311688	150311330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_150311582_150311658
ENSMUSG00000082740.2_150311479_150311857_1	chr2	-	302	2	FSM	ENSMUSG00000082740.2	ENST00000590964.5	542	2	38	202	38	-148	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTGCTCTACAAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	150311857	150311478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_150311582_150311658
ENSMUSG00000082740.2_150311479_150311857_2	chr2	-	300	2	NNC	ENSMUSG00000082740.2	novel	542	2	NA	NA	38	-148	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTGCTCTACAAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	150311857	150311478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_150311582_150311660
ENSMUSG00000083282.4_4905281_4910499_1	chr19	+	1499	13	FSM	ENSMUSG00000083282.4	ENST00000678471.1	1711	13	-1	213	-1	-120	multi-exon	FALSE	canonical	NA	NA	NA	NA	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCAGGACCTATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	4905280	4910499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4905515_4905725_4905825_4906097_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909433_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
ENSMUSG00000083282.4_4905281_4910499_2	chr19	+	1497	13	NNC	ENSMUSG00000083282.4	novel	1711	13	NA	NA	-1	-120	intron_retention	FALSE	canonical	NA	NA	NA	NA	1050	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCAGGACCTATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	4905280	4910499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_4905515_4905725_4905825_4906097_4906337_4906539_4906616_4907997_4908112_4908216_4908361_4908443_4908541_4908619_4908701_4909433_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
ENSMUSG00000083282.4_4905281_4910797_1	chr19	+	1886	13	NNC	ENSMUSG00000083282.4	novel	1802	13	NA	NA	-1	85	intron_retention	FALSE	canonical	NA	NA	NA	NA	1611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTAGATCTGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	4905280	4910797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_4905515_4905725_4905825_4906097_4906337_4906539_4906616_4907997_4908112_4908216_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910189_4910337_4910418
ENSMUSG00000083282.4_4905281_4910797_2	chr19	+	1888	13	FSM	ENSMUSG00000083282.4	ENST00000677005.1	1802	13	-1	-85	-1	85	multi-exon	FALSE	canonical	NA	NA	NA	NA	2292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTAGATCTGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	4905280	4910797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4905515_4905725_4905825_4906097_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910189_4910337_4910418
ENSMUSG00000083282.4_4905281_4910797_3	chr19	+	1886	13	NNC	ENSMUSG00000083282.4	novel	1802	13	NA	NA	-1	85	intron_retention	FALSE	canonical	NA	NA	NA	NA	1375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTAGATCTGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	4905280	4910797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_4905515_4905725_4905825_4906097_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908621_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910189_4910337_4910418
ENSMUSG00000083282.4_4905281_4910797_4	chr19	+	1886	13	NNC	ENSMUSG00000083282.4	novel	1802	13	NA	NA	-1	85	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	1280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTAGATCTGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	4905280	4910797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_4905515_4905725_4905825_4906097_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908445_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910189_4910337_4910418
ENSMUSG00000083282.4_4905281_4910797_5	chr19	+	1885	13	NIC	ENSMUSG00000083282.4	novel	1802	13	NA	NA	-1	85	intron_retention	FALSE	canonical	NA	NA	NA	NA	2808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTAGATCTGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	4905280	4910797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_+_4905515_4905725_4905825_4906097_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909433_4909551_4909629_4909695_4909785_4909877_4910189_4910337_4910418
ENSMUSG00000083282.4_4905281_4910797_6	chr19	+	1886	13	NNC	ENSMUSG00000083282.4	novel	1802	13	NA	NA	-1	85	intron_retention	FALSE	canonical	NA	NA	NA	NA	1419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTAGATCTGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	4905280	4910797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_4905515_4905725_4905825_4906097_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909631_4909695_4909785_4909877_4910189_4910337_4910418
ENSMUSG00000083282.4_4905737_4910619_1	chr19	+	1372	12	NNC	ENSMUSG00000083282.4	novel	1711	13	NA	NA	455	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCCCTGGGCCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	4905736	4910619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_4905825_4906097_4906337_4906539_4906616_4907997_4908112_4908216_4908361_4908443_4908541_4908619_4908701_4909433_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
ENSMUSG00000083282.4_4905737_4910619_2	chr19	+	1374	12	ISM	ENSMUSG00000083282.4	ENST00000678471.1	1711	13	455	93	455	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCCCTGGGCCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	4905736	4910619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4905825_4906097_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909433_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
ENSMUSG00000083282.4_4906097_4910797_1	chr19	+	1468	11	ISM	ENSMUSG00000083282.4	ENST00000310325.10	1714	13	815	-85	815	85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTAGATCTGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	4906096	4910797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
ENSMUSG00000083674.4_144301200_144308522_1	chr2	+	1734	2	FSM	ENSMUSG00000083674.4	ENST00000538547.4	1798	2	65	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACACATGCAAGACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	144301199	144308522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_144301325_144306913
ENSMUSG00000083674.4_144301200_144308522_2	chr2	+	1732	2	NNC	ENSMUSG00000083674.4	novel	1798	2	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1987	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACACATGCAAGACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	144301199	144308522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_144301325_144306915
ENSMUSG00000083844.9_5712129_5731292_1	chr11	+	1262	3	FSM	ENSMUSG00000083844.9	ENSMUST00000137510.8	1846	3	0	584	0	-584	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGGTAGCAGCAAGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	5712128	5731292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_5712241_5715508_5715572_5730205
ENSMUSG00000083844.9_5712150_5731366_1	chr11	+	1315	3	FSM	ENSMUSG00000083844.9	ENSMUST00000137510.8	1846	3	21	510	0	-510	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCAAAGAGTTGAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	5712149	5731366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_5712241_5715508_5715572_5730205
ENSMUSG00000084257.2_100120441_100120821_1	chr11	-	295	2	ISM	ENSMUSG00000084257.2	ENSMUST00000121423.2	964	7	2083	770	2083	-770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGATTGAGAAATTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	100120821	100120440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100120658_100120743
ENSMUSG00000084257.2_100120502_100120870_1	chr11	-	283	2	ISM	ENSMUSG00000084257.2	ENSMUST00000121423.2	964	7	2034	831	2034	-831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCCCATCCCTCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	100120870	100120501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_100120658_100120743
ENSMUSG00000084950.8_87957865_87960963_1	chr6	+	1235	2	FSM	ENSMUSG00000084950.8	ENSMUST00000134600.2	1434	2	0	199	0	-199	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCCGTGAGGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	87957864	87960963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_87958078_87959941
ENSMUSG00000084950.8_87957981_87961026_1	chr6	+	1182	2	FSM	ENSMUSG00000084950.8	ENSMUST00000134600.2	1434	2	116	136	116	-136	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCCAAAGAACCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	87957980	87961026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_87958078_87959941
ENSMUSG00000084957.4_53918292_53933058_1	chr19	-	2038	4	NNC	ENSMUSG00000084957.4	novel	2043	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAATCAACAGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	53933058	53918291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_53919929_53920560_53920637_53931896_53932011_53932847
ENSMUSG00000085148.2_75352470_75356187_1	chr11	+	332	3	FSM	ENSMUSG00000085148.2	ENSMUST00000149940.2	1752	3	105	1315	105	-1315	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGGTGAGAAAGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	75352469	75356187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_75352582_75354518_75354684_75356132
ENSMUSG00000085227.2_138264035_138264923_1	chr5	+	668	2	ISM	ENSMUSG00000085227.2	ENSMUST00000124298.2	743	3	1730	0	1704	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGACACAAGTTTATATT	NA	NA	NA	NA	NA	NA	NA	NA	138264034	138264923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_138264268_138264488
ENSMUSG00000085241.8_132079245_132080010_1	chr4	-	390	2	ISM	ENSMUSG00000085241.8	ENSMUST00000151374.2	426	3	934	0	637	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	132080010	132079244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_132079555_132079930
ENSMUSG00000085399.8_114769384_114777833_1	chr4	+	2007	3	ISM	ENSMUSG00000085399.8	ENSMUST00000123272.2	2908	4	2930	482	2930	-482	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGAGCTGTCCCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	114769383	114777833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_114771072_114773385_114773508_114777636
ENSMUSG00000085438.2_119424778_119430917_1	chr2	+	1240	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	-6	7066	-6	-7066	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAGAGCCCAGTAACAC	NA	NA	NA	NA	NA	NA	NA	NA	119424777	119430917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_119424916_119426739_119426993_119430068
ENSMUSG00000085569.2_89018901_89023640_1	chr4	-	429	2	ISM	ENSMUSG00000085569.2	ENSMUST00000154352.2	707	4	22823	0	22778	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTGGATACACAAGATACA	NA	NA	NA	NA	NA	NA	NA	NA	89023640	89018900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_89019277_89023587
ENSMUSG00000085569.2_89019097_89046418_1	chr4	-	466	4	FSM	ENSMUSG00000085569.2	ENSMUST00000154352.2	707	4	45	196	0	-196	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTGGTGAGACACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	89046418	89019096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_89019277_89023587_89023641_89036698_89036913_89046399
ENSMUSG00000085696.9_52188889_52190166_1	chr6	+	720	2	FSM	ENSMUSG00000085696.9	ENST00000524304.1	1940	2	927	293	927	-293	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGACGCGCTCCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	52188888	52190166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_52189468_52190025
ENSMUSG00000085696.9_52189094_52190371_1	chr6	+	720	2	FSM	ENSMUSG00000085696.9	ENST00000524304.1	1940	2	1132	88	-937	-88	multi-exon	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGACCGACAGCGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	52189093	52190371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_52189468_52190025
ENSMUSG00000085696.9_52189174_52190435_1	chr6	+	704	2	FSM	ENSMUSG00000085696.9	ENST00000524304.1	1940	2	1212	24	-857	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTCATAAACAACAACGG	NA	NA	NA	NA	NA	NA	NA	NA	52189173	52190435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_52189468_52190025
ENSMUSG00000085715.3_102475269_102525099_1	chrX	+	696	4	FSM	ENSMUSG00000085715.3	ENSMUST00000152916.2	4306	4	146	3464	146	-913	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCACCAAGCAATAATGCAC	NA	NA	NA	NA	NA	NA	NA	NA	102475268	102525099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_102475308_102491249_102491578_102491810_102491921_102524880
ENSMUSG00000085741.9_156686467_156704819_1	chr2	-	644	2	FSM	ENSMUSG00000085741.9	ENSMUST00000185402.2	904	2	64	196	-5	-196	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATCCCTTCCTAAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	156704819	156686466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_156686810_156704518
ENSMUSG00000085803.2_22685597_22687937_1	chr11	+	1096	2	ISM	ENSMUSG00000085803.2	ENSMUST00000148364.2	1257	3	1559	0	1559	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTTTTAGAAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	22685596	22687937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_22685684_22686928
ENSMUSG00000085936.8_28644017_28689868_1	chr13	-	1208	2	ISM	ENSMUSG00000085936.8	ENSMUST00000154298.2	433	4	10896	-907	6986	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAATCACAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	28689868	28644016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_28645045_28689688
ENSMUSG00000085936.8_28644924_29069327_1	chr13	-	1431	8	FSM	ENSMUSG00000085936.8	ENSMUST00000148885.8	1870	8	276	163	276	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTCTTGTATGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	29069327	28644923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_28645045_28745423_28745563_28792500_28792612_28852352_28852688_28853764_28853978_28956601_28956650_29067297_29067561_29069126
ENSMUSG00000085936.8_28745467_29069493_1	chr13	-	1433	7	ISM	ENSMUSG00000085936.8	ENSMUST00000148885.8	1870	8	110	100706	110	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAACAACAACAACAACAA	NA	NA	NA	NA	NA	NA	NA	NA	29069493	28745466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_28745563_28792500_28792612_28852352_28852688_28853764_28853978_28956601_28956650_29067297_29067561_29069126
ENSMUSG00000086316.9_152506623_152524258_1	chrX	+	671	3	FSM	ENSMUSG00000086316.9	ENSMUST00000185492.7	1346	3	17	658	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATTAATGTCCAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	152506622	152524258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_152506934_152508700_152508838_152524035
ENSMUSG00000086316.9_152506766_152524325_1	chrX	+	595	3	FSM	ENSMUSG00000086316.9	ENSMUST00000185492.7	1346	3	160	591	143	65	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAGTTTGAAATGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	152506765	152524325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_152506934_152508700_152508838_152524035
ENSMUSG00000086316.9_152506835_152524394_1	chrX	+	595	3	FSM	ENSMUSG00000086316.9	ENSMUST00000185492.7	1346	3	229	522	212	134	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACACACATAGAATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	152506834	152524394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_152506934_152508700_152508838_152524035
ENSMUSG00000086316.9_152508727_152524516_1	chrX	+	592	2	ISM	ENSMUSG00000086316.9	ENSMUST00000185492.7	1346	3	2121	400	-102	256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCTAACATATGCAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	152508726	152524516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_152508838_152524035
ENSMUSG00000086322.8_133971087_133973020_1	chr4	+	1173	3	NNC	ENSMUSG00000086322.8	novel	1174	3	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1763	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCGGGGCGTGAGCGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	133971086	133973020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_133971278_133971545_133971725_133972217
ENSMUSG00000086322.8_133971087_133973020_2	chr4	+	1176	3	NNC	ENSMUSG00000086322.8	novel	1174	3	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCGGGGCGTGAGCGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	133971086	133973020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_133971287_133971551_133971725_133972217
ENSMUSG00000086322.8_133971087_133973020_3	chr4	+	1182	3	FSM	ENSMUSG00000086322.8	ENST00000448923.2	1174	3	-8	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCGGGGCGTGAGCGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	133971086	133973020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_133971287_133971545_133971725_133972217
ENSMUSG00000086427.9_52222989_52226091_1	chr6	+	573	4	ISM	ENSMUSG00000086427.9	ENST00000522863.2	1549	5	766	378	766	-378	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCTGGGGAAGACCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	52222988	52226091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52223181_52223294_52223512_52223652_52223789_52226063
ENSMUSG00000086427.9_52223089_52226148_1	chr6	+	530	4	ISM	ENSMUSG00000086427.9	ENST00000522863.2	1549	5	866	321	866	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTCTAGAAGAGGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	52223088	52226148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52223181_52223294_52223512_52223652_52223789_52226063
ENSMUSG00000086427.9_52223153_52226186_1	chr6	+	504	4	ISM	ENSMUSG00000086427.9	ENST00000522863.2	1549	5	930	283	930	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCCCTGGACATTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	52223152	52226186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52223181_52223294_52223512_52223652_52223789_52226063
ENSMUSG00000086427.9_52223379_52226360_1	chr6	+	566	3	ISM	ENSMUSG00000086427.9	ENST00000522863.2	1549	5	1156	109	1156	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCCGCGGCCTGACGGT	NA	NA	NA	NA	NA	NA	NA	NA	52223378	52226360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_52223512_52223652_52223789_52226063
ENSMUSG00000086507.2_80067910_80068517_1	chr11	-	458	2	NNC	ENSMUSG00000086507.2	novel	492	2	NA	NA	31	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTCCCAGAAAAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	80068517	80067909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_80068221_80068370
ENSMUSG00000086507.2_80067910_80068517_2	chr11	-	462	2	FSM	ENSMUSG00000086507.2	ENST00000442757.1	492	2	31	-1	31	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTCCCAGAAAAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	80068517	80067909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_80068225_80068370
ENSMUSG00000086598.10_84491808_84497468_1	chr2	+	1118	2	ISM	ENSMUSG00000086598.10	ENST00000436147.3	2446	3	101	1270	101	-1270	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGCCTCCCCTCAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	84491807	84497468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84491945_84496487
ENSMUSG00000086598.10_84491830_84497552_1	chr2	+	1180	2	ISM	ENSMUSG00000086598.10	ENST00000436147.3	2446	3	123	1186	123	-1186	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAGTTAATGAGCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	84491829	84497552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84491945_84496487
ENSMUSG00000086598.10_84491903_84497580_1	chr2	+	1135	2	ISM	ENSMUSG00000086598.10	ENST00000436147.3	2446	3	196	1158	196	-1158	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATACAACTGTGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	84491902	84497580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84491945_84496487
ENSMUSG00000086598.10_84497049_84498224_1	chr2	+	1133	2	ISM	ENSMUSG00000086598.10	ENST00000436147.3	2446	3	5342	514	5342	-514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCACTTTGACTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	84497048	84498224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84498050_84498092
ENSMUSG00000086598.10_84497096_84498287_1	chr2	+	1149	2	ISM	ENSMUSG00000086598.10	ENST00000436147.3	2446	3	5389	451	5389	-451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTGGGCAGAGACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	84497095	84498287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84498050_84498092
ENSMUSG00000086598.10_84497555_84498736_1	chr2	+	1139	2	ISM	ENSMUSG00000086598.10	ENST00000436147.3	2446	3	5848	2	5848	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTATGTGGTACCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	84497554	84498736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_84498050_84498092
ENSMUSG00000087143.10_78379451_78384430_1	chr13	+	1732	2	ISM	ENSMUSG00000087143.10	ENSMUST00000123998.2	2203	3	28958	253	28545	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCATGACCATCGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	78379450	78384430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_78379533_78382780
ENSMUSG00000087174.8_104082169_104091573_1	chrX	-	1309	2	ISM	ENSMUSG00000087174.8	ENSMUST00000127533.8	3164	6	22129	1366	22068	245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATTATTTGCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	104091573	104082168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_104083419_104091514
ENSMUSG00000087174.8_104082423_104112226_1	chrX	-	1374	4	ISM	ENSMUSG00000087174.8	ENSMUST00000127533.8	3164	6	1476	1620	1415	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATATGACCTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	104112226	104082422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_104083419_104091514_104091617_104110364_104110484_104112069
ENSMUSG00000087230.11_136109524_136124162_1	chr1	-	1320	9	ISM	ENSMUSG00000087230.11	ENST00000435735.2	2058	16	11891	-21	11891	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCACACTGGGGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	136124162	136109523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_136109643_136113196_136113350_136113684_136113862_136114398_136114540_136118436_136118552_136118645_136118830_136119296_136119423_136119840_136119989_136124005
ENSMUSG00000087230.11_136113197_136125986_1	chr1	-	1350	9	ISM	ENSMUSG00000087230.11	ENST00000435735.2	2058	16	10067	3652	10067	-3652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGGTAAGAAGCCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	136125986	136113196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_136113350_136113684_136113862_136114398_136114540_136118436_136118552_136118645_136118830_136119296_136119423_136119840_136119989_136124005_136124161_136125835
ENSMUSG00000087230.11_136113312_136127336_1	chr1	-	1310	10	ISM	ENSMUSG00000087230.11	ENST00000435735.2	2058	16	8717	3767	8717	-3767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATGTCCTGGCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	136127336	136113311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_136113350_136113684_136113862_136114398_136114540_136118436_136118552_136118645_136118830_136119296_136119423_136119840_136119989_136124005_136124161_136125835_136125986_136127260
ENSMUSG00000087230.11_136113724_136128130_1	chr1	-	1293	10	ISM	ENSMUSG00000087230.11	ENST00000435735.2	2058	16	7923	4179	7923	-4179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGCTGACCTTCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	136128130	136113723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_136113862_136114398_136114540_136118436_136118552_136118645_136118830_136119296_136119423_136119840_136119989_136124005_136124161_136125835_136125986_136127260_136127343_136128076
ENSMUSG00000087230.11_136113786_136128170_1	chr1	-	1271	10	ISM	ENSMUSG00000087230.11	ENST00000435735.2	2058	16	7883	4241	7883	-4241	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTCCTGCTGCAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	136128170	136113785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_136113862_136114398_136114540_136118436_136118552_136118645_136118830_136119296_136119423_136119840_136119989_136124005_136124161_136125835_136125986_136127260_136127343_136128076
ENSMUSG00000087230.11_136113844_136128216_1	chr1	-	1259	10	ISM	ENSMUSG00000087230.11	ENST00000435735.2	2058	16	7837	4299	7837	-4299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGCCCTTCGTGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	136128216	136113843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_136113862_136114398_136114540_136118436_136118552_136118645_136118830_136119296_136119423_136119840_136119989_136124005_136124161_136125835_136125986_136127260_136127343_136128076
ENSMUSG00000087230.11_136114394_136128788_1	chr1	-	1356	10	ISM	ENSMUSG00000087230.11	ENST00000435735.2	2058	16	7265	4849	7265	-4849	internal_fragment	TRUE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAACAGGGGTAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	136128788	136114393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_136114540_136118436_136118552_136118645_136118830_136119296_136119423_136119840_136119989_136124005_136124161_136125835_136125986_136127260_136127343_136128076_136128217_136128678
ENSMUSG00000087230.11_136114525_136134705_1	chr1	-	1274	11	ISM	ENSMUSG00000087230.11	ENST00000435735.2	2058	16	1348	4980	1348	-4980	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGGCAAGTGTTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	136134705	136114524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_136114540_136118436_136118552_136118645_136118830_136119296_136119423_136119840_136119989_136124005_136124161_136125835_136125986_136127260_136127343_136128076_136128217_136128678_136128787_136134654
ENSMUSG00000087230.11_136118523_136135552_1	chr1	-	1271	11	ISM	ENSMUSG00000087230.11	ENST00000435735.2	2058	16	501	8978	501	-8978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGCCCTGTCTTCAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	136135552	136118522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_136118552_136118645_136118830_136119296_136119423_136119840_136119989_136124005_136124161_136125835_136125986_136127260_136127343_136128076_136128217_136128678_136128787_136134654_136134742_136135490
ENSMUSG00000087230.11_136118732_136136045_1	chr1	-	1280	11	ISM	ENSMUSG00000087230.11	ENST00000435735.2	2058	16	8	9187	8	-9187	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGTCTTATATTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	136136045	136118731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_136118830_136119296_136119423_136119840_136119989_136124005_136124161_136125835_136125986_136127260_136127343_136128076_136128217_136128678_136128787_136134654_136134742_136135490_136135617_136135985
ENSMUSG00000087247.4_6429591_6464544_1	chr1	+	334	4	FSM	ENSMUSG00000087247.4	ENST00000523939.1	358	4	25	-1	25	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAATATAAAAAATGGACA	NA	NA	NA	NA	NA	NA	NA	NA	6429590	6464544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_6429739_6458796_6458851_6459663_6459745_6464493
ENSMUSG00000087247.4_6429591_6464544_2	chr1	+	406	5	FSM	ENSMUSG00000087247.4	ENST00000358543.9	884	5	25	453	25	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAATATAAAAAATGGACA	NA	NA	NA	NA	NA	NA	NA	NA	6429590	6464544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_6429739_6458796_6458851_6459663_6459745_6461263_6461336_6464493
ENSMUSG00000087247.4_6458794_6464750_1	chr1	+	467	4	ISM	ENSMUSG00000087247.4	ENST00000358543.9	884	5	29228	247	29228	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTAATATTGTATGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	6458793	6464750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_6458851_6459663_6459745_6461263_6461336_6464493
ENSMUSG00000087247.4_6461284_6464955_1	chr1	+	514	2	ISM	ENSMUSG00000087247.4	ENST00000358543.9	884	5	31718	42	31718	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACGAAAAAAATTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	6461283	6464955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_6461336_6464493
ENSMUSG00000087260.6_107186315_107191398_1	chr3	+	736	4	NNC	ENSMUSG00000087260.6	novel	743	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTCATTTCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	107186314	107191398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_107186430_107187192_107187248_107189224_107189343_107190950
ENSMUSG00000087260.6_107186315_107217732_1	chr3	+	833	5	NNC	ENSMUSG00000087260.6	novel	743	4	NA	NA	0	26334	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACAATAACAACAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	107186314	107217732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_107186430_107187185_107187248_107189224_107189343_107190950_107191399_107217642
ENSMUSG00000087260.6_107186315_107217732_2	chr3	+	790	5	NNC	ENSMUSG00000087260.6	novel	743	4	NA	NA	0	26334	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACAATAACAACAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	107186314	107217732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_107186430_107187185_107187248_107189224_107189343_107190950_107191399_107217685
ENSMUSG00000087365.8_52144084_52145926_1	chrX	-	757	4	FSM	ENSMUSG00000087365.8	ENSMUST00000129764.8	868	4	111	0	111	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAGAATACAGGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	52145926	52144083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_52144368_52144732_52145042_52145534_52145647_52145874
ENSMUSG00000087365.8_52144225_52146037_1	chrX	-	727	4	FSM	ENSMUSG00000087365.8	ENSMUST00000129764.8	868	4	0	141	0	-141	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCATATGTTAGCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	52146037	52144224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_52144368_52144732_52145042_52145534_52145647_52145874
ENSMUSG00000087381.9_156111083_156114945_1	chr4	-	408	3	ISM	ENSMUSG00000087381.9	ENSMUST00000126009.2	810	4	1134	329	1134	-329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTGCCCTGTGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	156114945	156111082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_156111344_156112931_156113012_156114878
ENSMUSG00000087679.3_26026826_26030329_1	chr2	-	2279	2	FSM	ENSMUSG00000087679.3	ENSMUST00000133808.2	2483	2	204	0	204	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGAGTGATTGCTTACG	NA	NA	NA	NA	NA	NA	NA	NA	26030329	26026825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26028926_26030150
ENSMUSG00000087679.3_26026826_26030329_2	chr2	-	2274	2	NNC	ENSMUSG00000087679.3	novel	2483	2	NA	NA	204	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGAGTGATTGCTTACG	NA	NA	NA	NA	NA	NA	NA	NA	26030329	26026825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_26028921_26030150
ENSMUSG00000087679.3_26026946_26030533_1	chr2	-	2363	2	FSM	ENSMUSG00000087679.3	ENSMUST00000133808.2	2483	2	0	120	0	-120	multi-exon	FALSE	canonical	NA	NA	NA	NA	3754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGGAGGGAATGATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	26030533	26026945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26028926_26030150
ENSMUSG00000087679.3_26026946_26030533_2	chr2	-	2358	2	NNC	ENSMUSG00000087679.3	novel	2483	2	NA	NA	0	-120	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGGAGGGAATGATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	26030533	26026945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_26028921_26030150
ENSMUSG00000087687.4_3671551_3674006_1	chr8	+	964	4	FSM	ENSMUSG00000087687.4	ENSMUST00000156380.4	1193	4	0	229	0	-229	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTCTAAACATGTATGC	NA	NA	NA	NA	NA	NA	NA	NA	3671550	3674006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_3671612_3672341_3672429_3672592_3672626_3673223
ENSMUSG00000089678.9_10373774_10388289_1	chr15	+	605	6	ISM	ENSMUSG00000089678.9	ENST00000618015.4	1732	10	6	21941	6	7017	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGGTATATCGAACAATT	NA	NA	NA	NA	NA	NA	NA	NA	10373773	10388289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_10373955_10377460_10377585_10378883_10378979_10380688_10380783_10381419_10381514_10388272
ENSMUSG00000089678.9_10373899_10388912_1	chr15	+	601	7	ISM	ENSMUSG00000089678.9	ENST00000618015.4	1732	10	131	21318	131	7640	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGAAGCCTTTGCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	10373898	10388912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_10373955_10377460_10377585_10378883_10378979_10380688_10380783_10381419_10381514_10388272_10388374_10388875
ENSMUSG00000089678.9_10377505_10399171_1	chr15	+	629	7	ISM	ENSMUSG00000089678.9	ENST00000618015.4	1732	10	3737	11059	3737	-10653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGGGACGAATTTGATAT	NA	NA	NA	NA	NA	NA	NA	NA	10377504	10399171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_10377585_10378883_10378979_10380688_10380783_10381419_10381514_10388272_10388374_10388875_10388969_10399099
ENSMUSG00000089678.9_10377556_10399227_1	chr15	+	634	7	ISM	ENSMUSG00000089678.9	ENST00000618015.4	1732	10	3788	11003	3788	-10597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGAGATGGTTCAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	10377555	10399227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_10377585_10378883_10378979_10380688_10380783_10381419_10381514_10388272_10388374_10388875_10388969_10399099
ENSMUSG00000089678.9_10380742_10409563_1	chr15	+	606	7	ISM	ENSMUSG00000089678.9	ENST00000618015.4	1732	10	6974	667	6974	-261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACGAAGATGGAAGTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	10380741	10409563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_10380783_10381419_10381514_10388272_10388374_10388875_10388969_10399099_10399250_10400532_10400632_10409535
ENSMUSG00000089678.9_10381491_10409698_1	chr15	+	629	6	ISM	ENSMUSG00000089678.9	ENST00000618015.4	1732	10	7723	532	7723	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTTGAAAAACCACAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	10381490	10409698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_10381514_10388272_10388374_10388875_10388969_10399099_10399250_10400532_10400632_10409535
ENSMUSG00000089678.9_10388301_10409824_1	chr15	+	704	5	ISM	ENSMUSG00000089678.9	ENST00000618015.4	1732	10	14533	406	14533	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTCAGGGGAAGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	10388300	10409824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_10388374_10388875_10388969_10399099_10399250_10400532_10400632_10409535
ENSMUSG00000089678.9_10400531_10409998_1	chr15	+	564	2	ISM	ENSMUSG00000089678.9	ENST00000618015.4	1732	10	26763	232	26763	174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGCTTCAGCTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	10400530	10409998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_10400632_10409535
ENSMUSG00000089678.9_10400565_10410078_1	chr15	+	610	2	ISM	ENSMUSG00000089678.9	ENST00000618015.4	1732	10	26797	152	26797	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGGAAGCCATGAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	10400564	10410078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_10400632_10409535
ENSMUSG00000089704.10_124958247_125059367_1	chr8	+	982	10	ISM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	117	13094	117	-13094	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTACGACATGATGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	124958246	125059367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306
ENSMUSG00000089704.10_125022105_125061049_1	chr8	+	911	10	ISM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	63975	11412	63975	-11412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATCATCCCGTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	125022104	125061049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013
ENSMUSG00000089704.10_125032319_125063392_1	chr8	+	931	10	ISM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	74189	9069	74189	-9069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCTATGGGAAGTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	125032318	125063392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312
ENSMUSG00000089704.10_125051020_125067601_1	chr8	+	933	10	ISM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	92890	4860	92890	-4860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTTACTGTGGTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	125051019	125067601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557
ENSMUSG00000089704.10_125058778_125070283_1	chr8	+	955	8	ISM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	100648	2178	100648	-2178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCTCAGTGTTCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	125058777	125070283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ENSMUSG00000089704.10_125064007_125070662_1	chr8	+	946	4	ISM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	105877	1799	105877	-1799	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTAAGGAAAAAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	125064006	125070662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125064085_125065181_125065309_125067557_125067678_125070041
ENSMUSG00000089704.10_125067575_125070914_1	chr8	+	976	2	ISM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	109445	1547	109445	-1547	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCAGCCGGCCCACGCT	NA	NA	NA	NA	NA	NA	NA	NA	125067574	125070914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_125067678_125070041
ENSMUSG00000089715.13_79711521_79717775_1	chr15	-	1722	2	ISM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	1114	3424	652	517	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCAAGAACCTGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	79717775	79711520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_79713180_79717712
ENSMUSG00000089739.3_167450855_167486853_1	chr2	-	758	4	ISM	ENSMUSG00000089739.3	ENSMUST00000125544.3	2367	8	16563	1085	16563	-1085	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGTTGTGCTGTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	167486853	167450854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167451168_167452223_167452350_167459748_167459898_167486683
ENSMUSG00000089739.3_167452228_167496629_1	chr2	-	823	6	ISM	ENSMUSG00000089739.3	ENSMUST00000125544.3	2367	8	6787	2458	6787	-2458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGAGTCCCCCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	167496629	167452227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167452350_167459748_167459898_167486683_167486897_167487951_167488097_167488887_167488980_167496527
ENSMUSG00000089739.3_167459749_167503416_1	chr2	-	843	6	ISM	ENSMUSG00000089739.3	ENSMUST00000125544.3	2367	8	0	9979	0	-9979	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCACCAAGCTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	167503416	167459748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167459898_167486683_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
ENSMUSG00000089832.9_27041837_27051469_1	chr7	-	1425	11	NNC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	3975	-279	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCAGATGGCCGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	27051469	27041836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_27041970_27042070_27042183_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404
ENSMUSG00000089832.9_27042121_27052082_1	chr7	-	1331	11	NNC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	3362	-563	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTCGGGGCTCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	27052082	27042120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_27042183_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019
ENSMUSG00000089832.9_27042769_27053858_1	chr7	-	1329	11	ISM	ENSMUSG00000089832.9	ENSMUST00000003857.7	2358	18	1586	1211	1586	-1211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCCAGACCCCGACGTT	NA	NA	NA	NA	NA	NA	NA	NA	27053858	27042768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796
ENSMUSG00000089832.9_27044109_27054712_1	chr7	-	1359	12	ISM	ENSMUSG00000089832.9	ENSMUST00000003857.7	2358	18	732	2551	732	-2551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCAGTCAGCTATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	27054712	27044108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638
ENSMUSG00000089832.9_27044719_27055347_1	chr7	-	1337	14	ISM	ENSMUSG00000089832.9	ENSMUST00000003857.7	2358	18	97	3161	97	-3161	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCCGCTTTCGAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	27055347	27044718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
ENSMUSG00000089847.9_105289655_105291053_1	chr7	+	1090	3	FSM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	392	1791	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGCTTTCTTGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	105289654	105291053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_105289830_105289968_105290065_105290234
ENSMUSG00000089847.9_105290011_105291188_1	chr7	+	1008	2	ISM	ENSMUSG00000089847.9	ENSMUST00000210350.2	529	4	253	-132	214	132	intron_retention	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTTGTCTAATCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	105290010	105291188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_105290065_105290234
ENSMUSG00000089872.11_190505787_190603978_1	chr1	-	2439	9	ISM	ENSMUSG00000089872.11	ENST00000543470.5	3304	15	39988	-1	39988	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAAGGATTGTCCTTACC	NA	NA	NA	NA	NA	NA	NA	NA	190603978	190505786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788
ENSMUSG00000089872.11_190514732_190604150_1	chr1	-	2497	8	ISM	ENSMUSG00000089872.11	ENST00000543470.5	3304	15	39816	8944	39816	-8944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGAGTTGTCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	190604150	190514731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788
ENSMUSG00000089872.11_190515761_190617626_1	chr1	-	2495	8	ISM	ENSMUSG00000089872.11	ENST00000543470.5	3304	15	26340	9973	26340	-9973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGCAGTGACCCAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	190617626	190515760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530
ENSMUSG00000089872.11_190530849_190620962_1	chr1	-	2527	8	ISM	ENSMUSG00000089872.11	ENST00000543470.5	3304	15	23004	25061	23004	-25061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGAGCACTCTCCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	190620962	190530848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530_190617625_190620845
ENSMUSG00000089872.11_190531209_190631768_1	chr1	-	2558	8	ISM	ENSMUSG00000089872.11	ENST00000543470.5	3304	15	12198	25421	12198	-25421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	890	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGAACTTTCACAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	190631768	190531208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647
ENSMUSG00000089872.11_190531518_190643794_1	chr1	-	2442	11	ISM	ENSMUSG00000089872.11	ENST00000543470.5	3304	15	172	25730	172	-25730	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCGACACTGCCACGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	190643794	190531517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190635987_190636103_190637279_190637316_190643752
ENSMUSG00000089872.11_190531560_190643931_1	chr1	-	2537	11	ISM	ENSMUSG00000089872.11	ENST00000543470.5	3304	15	35	25772	35	-25772	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTCCCTGCTCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	190643931	190531559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190635987_190636103_190637279_190637316_190643752
ENSMUSG00000089872.11_190531617_190643931_1	chr1	-	2480	11	ISM	ENSMUSG00000089872.11	ENST00000543470.5	3304	15	35	25829	35	-25829	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCAGGTGGAGGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	190643931	190531616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190635987_190636103_190637279_190637316_190643752
ENSMUSG00000089911.5_116425101_116427419_1	chr3	-	1078	2	ISM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	28907	288	28907	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGTTTGTCCTAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	116427419	116425100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116426130_116427370
ENSMUSG00000089911.5_116425153_116427476_1	chr3	-	1083	2	ISM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	28850	340	28850	-340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATATAGTGGCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	116427476	116425152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116426130_116427370
ENSMUSG00000089911.5_116425198_116427540_1	chr3	-	1102	2	ISM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	28786	385	28786	-385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGTAGCCTTGAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	116427540	116425197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116426130_116427370
ENSMUSG00000089911.5_116425481_116434949_1	chr3	-	1150	6	ISM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	21377	668	21377	-668	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTAAAGAATTGTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	116434949	116425480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895
ENSMUSG00000089911.5_116425727_116435466_1	chr3	-	1072	7	ISM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	20860	914	20860	-914	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTTATATTAGCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	116435466	116425726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358
ENSMUSG00000089911.5_116425841_116439027_1	chr3	-	1082	8	ISM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	17299	1028	17299	-1028	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCAGTGTACTTTAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	116439027	116425840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014
ENSMUSG00000089911.5_116425973_116441453_1	chr3	-	1075	9	ISM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	14873	1160	14873	-1160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCGCCAGGAGAGGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	116441453	116425972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430
ENSMUSG00000089911.5_116426041_116441524_1	chr3	-	1078	9	ISM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	14802	1228	14802	-1228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTAAGTTTAAGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	116441524	116426040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430
ENSMUSG00000089911.5_116427437_116445137_1	chr3	-	1105	10	ISM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	11189	2624	11189	-2624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACTGCCAATCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	116445137	116427436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052
ENSMUSG00000089911.5_116428549_116456140_1	chr3	-	1118	10	ISM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	186	3736	186	-3736	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGAGCGGAGTTCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	116456140	116428548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ENSMUSG00000089911.5_116430010_116456326_1	chr3	-	1120	9	ISM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	0	5197	0	-5197	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGGAAATAAGAACACCAT	NA	NA	NA	NA	NA	NA	NA	NA	116456326	116430009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ENSMUSG00000089917.8_181211024_181223765_1	chr2	-	1714	14	NIC	ENSMUSG00000089917.8	novel	1849	15	NA	NA	0	-69	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1495	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGTTTAAAAATGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	181223765	181211023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ENSMUSG00000089917.8_181211024_181223765_2	chr2	-	1729	14	NNC	ENSMUSG00000089917.8	novel	1849	15	NA	NA	0	-69	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGTTTAAAAATGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	181223765	181211023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212099_181212196_181212292_181212392_181214853_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ENSMUSG00000089917.8_181211799_181215062_1	chr2	-	496	5	ISM	ENSMUSG00000089917.8	ENST00000358711.7	1880	13	8703	844	8703	-844	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAAACCATGGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	181215062	181211798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_181211825_181211925_181211989_181212101_181212392_181214866_181214929_181215007
ENSMUSG00000089917.8_181211926_181215199_1	chr2	-	607	4	ISM	ENSMUSG00000089917.8	ENST00000358711.7	1880	13	8566	971	8566	-971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACATGGCTAGGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	181215199	181211925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_181211989_181212101_181212392_181214866_181214929_181215007
ENSMUSG00000089917.8_181212303_181216293_1	chr2	-	545	5	ISM	ENSMUSG00000089917.8	ENST00000358711.7	1880	13	7472	1348	7472	-1348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCATCAGGTAAGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	181216293	181212302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_181212392_181214866_181214929_181215007_181215198_181216004_181216077_181216161
ENSMUSG00000089917.8_181212356_181216332_1	chr2	-	531	5	ISM	ENSMUSG00000089917.8	ENST00000358711.7	1880	13	7433	1401	7433	-1401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCAGACACTGAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	181216332	181212355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_181212392_181214866_181214929_181215007_181215198_181216004_181216077_181216161
ENSMUSG00000089942.10_3844034_3844641_1	chr7	-	349	2	ISM	ENSMUSG00000089942.10	ENSMUST00000119469.2	2021	9	3409	2833	3409	-2833	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCATGAGTGCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	3844641	3844033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_3844219_3844477
ENSMUSG00000089989.11_44783820_44785655_1	chr7	-	503	4	ISM	ENSMUSG00000110206.2	ENSMUST00000211246.2	852	5	-175	870	54	-870	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCACCTCATGTACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	44785655	44783819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44783941_44784545_44784600_44785087_44785202_44785441
ENSMUSG00000090000.3_77017759_77028841_1	chr18	+	889	3	FSM	ENSMUSG00000090000.3	ENSMUST00000026487.6	1402	3	46	467	18	-460	multi-exon	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGACCTGAACAGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	77017758	77028841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_77017913_77027263_77027366_77028208
ENSMUSG00000090084.8_9904795_9925318_1	chrX	-	1230	6	ISM	ENSMUSG00000090084.8	ENST00000432886.6	1694	9	58586	-10	58526	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCACCTTTAAAAAATACTC	NA	NA	NA	NA	NA	NA	NA	NA	9925318	9904794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_9905340_9913913_9914036_9915854_9915989_9921090_9921271_9921917_9922040_9925191
ENSMUSG00000090084.8_9905008_9935726_1	chrX	-	1132	7	ISM	ENSMUSG00000090084.8	ENST00000432886.6	1694	9	48178	203	48118	138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAAGGCTTTTTTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	9935726	9905007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_9905340_9913913_9914036_9915854_9915989_9921090_9921271_9921917_9922040_9925191_9925319_9935611
ENSMUSG00000090084.8_9905146_9983844_1	chrX	-	1293	9	FSM	ENSMUSG00000090084.8	ENST00000432886.6	1694	9	60	341	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGGTGGCTCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	9983844	9905145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_9905340_9913913_9914036_9915854_9915989_9921090_9921271_9921917_9922040_9925191_9925319_9935611_9935804_9940007_9940068_9983682
ENSMUSG00000090084.8_9905292_9921959_1	chrX	-	404	4	ISM	ENSMUSG00000090084.8	ENST00000538295.5	1749	9	61945	487	61885	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCATGGCATGGATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	9921959	9905291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_9905340_9915854_9915989_9921090_9921271_9921917
ENSMUSG00000090084.8_9913913_9983948_1	chrX	-	1204	8	ISM	ENSMUSG00000090084.8	ENST00000432886.6	1694	9	-44	9108	0	-8767	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCAACATGCACTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	9983948	9913912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_9914036_9915854_9915989_9921090_9921271_9921917_9922040_9925191_9925319_9935611_9935804_9940007_9940068_9983682
ENSMUSG00000090084.8_9921153_9933691_1	chrX	-	395	4	ISM	ENSMUSG00000090084.8	ENSMUST00000115543.3	1218	8	50153	16007	50153	-16007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCTGCCCGAGTATGCC	NA	NA	NA	NA	NA	NA	NA	NA	9933691	9921152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_9921271_9921917_9922040_9925191_9925319_9933663
ENSMUSG00000090084.8_9921197_9933749_1	chrX	-	409	4	ISM	ENSMUSG00000090084.8	ENSMUST00000115543.3	1218	8	50095	16051	50095	-16051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCTGTGAATTCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	9933749	9921196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_9921271_9921917_9922040_9925191_9925319_9933663
ENSMUSG00000090084.8_9921251_9933800_1	chrX	-	406	4	ISM	ENSMUSG00000090084.8	ENSMUST00000115543.3	1218	8	50044	16105	50044	-16105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCCCCAGAAAATGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	9933800	9921250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_9921271_9921917_9922040_9925191_9925319_9933663
ENSMUSG00000090084.8_9921918_9935638_1	chrX	-	453	4	ISM	ENSMUSG00000090084.8	ENST00000538295.5	1749	9	48266	17113	48206	-16772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACTGCTGCTTCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	9935638	9921917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_9922040_9925191_9925319_9933663_9933841_9935611
ENSMUSG00000090084.8_9922003_9935680_1	chrX	-	410	4	ISM	ENSMUSG00000090084.8	ENST00000538295.5	1749	9	48224	17198	48164	-16857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAAGGAGACCACAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	9935680	9922002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_9922040_9925191_9925319_9933663_9933841_9935611
ENSMUSG00000090084.8_9933687_9983734_1	chrX	-	458	4	ISM	ENSMUSG00000090084.8	ENST00000538295.5	1749	9	170	28882	110	-28541	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGACCAGCCTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	9983734	9933686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_9933841_9935611_9935804_9940007_9940068_9983682
ENSMUSG00000090084.8_9933810_9983844_1	chrX	-	445	4	ISM	ENSMUSG00000090084.8	ENST00000538295.5	1749	9	60	29005	0	-28664	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGGGTTTAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	9983844	9933809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_-_9933841_9935611_9935804_9940007_9940068_9983682
ENSMUSG00000090086.8_123277924_123280177_1	chr5	-	555	3	FSM	ENSMUSG00000090086.8	ENST00000538335.1	549	3	0	-6	0	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACACCAGAACCCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	123280177	123277923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_123278037_123279416_123279460_123279778
ENSMUSG00000090115.8_47929774_47983334_1	chr17	+	924	4	ISM	ENSMUSG00000023984.18	ENST00000684631.1	3161	9	5887	8785	5887	-8785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGACGCTGCGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	47929773	47983334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47929988_47933809_47934080_47960874_47960949_47982968
ENSMUSG00000090115.8_47929841_47983394_1	chr17	+	917	4	ISM	ENSMUSG00000023984.18	ENST00000684631.1	3161	9	5954	8725	5954	-8725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGACAGCCGCAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	47929840	47983394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47929988_47933809_47934080_47960874_47960949_47982968
ENSMUSG00000090115.8_47929909_47983466_1	chr17	+	921	4	ISM	ENSMUSG00000023984.18	ENST00000684631.1	3161	9	6022	8653	6022	-8653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTCCAGAAGAGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	47929908	47983466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47929988_47933809_47934080_47960874_47960949_47982968
ENSMUSG00000090115.8_47933845_47983582_1	chr17	+	923	3	ISM	ENSMUSG00000023984.18	ENST00000684631.1	3161	9	9958	8537	9958	-8537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGAGGAGCTGGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	47933844	47983582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47934080_47960874_47960949_47982968
ENSMUSG00000090115.8_47933904_47983624_1	chr17	+	906	3	ISM	ENSMUSG00000023984.18	ENST00000684631.1	3161	9	10017	8495	10017	-8495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTCCTGCACGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	47933903	47983624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47934080_47960874_47960949_47982968
ENSMUSG00000090115.8_47933948_47983688_1	chr17	+	926	3	ISM	ENSMUSG00000023984.18	ENST00000684631.1	3161	9	10061	8431	10061	-8431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCGCAGCTGCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	47933947	47983688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47934080_47960874_47960949_47982968
ENSMUSG00000090115.8_47960907_47984214_1	chr17	+	1288	2	ISM	ENSMUSG00000090115.8	ENST00000373010.5	2029	6	33	7602	33	-7602	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGCAGCAGGAACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	47960906	47984214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47960949_47982968
ENSMUSG00000090115.8_47983230_47985809_1	chr17	+	1283	2	ISM	ENSMUSG00000090115.8	ENST00000373010.5	2029	6	22356	6007	22356	-6007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGGGGAGAATCTACGCT	NA	NA	NA	NA	NA	NA	NA	NA	47983229	47985809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47984344_47985640
ENSMUSG00000090115.8_47983645_47991817_1	chr17	+	1279	5	ISM	ENSMUSG00000090115.8	ENST00000373010.5	2029	6	22771	-1	22771	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCCAGGTCTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	47983644	47991817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47991606
ENSMUSG00000090115.8_47984226_47991817_1	chr17	+	849	5	ISM	ENSMUSG00000090115.8	ENSMUST00000024779.15	8252	7	42611	5846	23352	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCCAGGTCTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	47984225	47991817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
ENSMUSG00000090115.8_47984226_47991981_1	chr17	+	1013	5	ISM	ENSMUSG00000090115.8	ENSMUST00000024779.15	8252	7	42611	5682	23352	165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCTTCTATGAAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	47984225	47991981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
ENSMUSG00000090115.8_47985705_47992085_1	chr17	+	935	4	ISM	ENSMUSG00000090115.8	ENSMUST00000024779.15	8252	7	44090	5578	24831	269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGTTGTGAGTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	47985704	47992085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47985846_47989768_47989878_47990588_47990795_47991606
ENSMUSG00000090115.8_47985780_47992117_1	chr17	+	892	4	ISM	ENSMUSG00000090115.8	ENSMUST00000024779.15	8252	7	44165	5546	24906	301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCCAAAGCACTGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	47985779	47992117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47985846_47989768_47989878_47990588_47990795_47991606
ENSMUSG00000090124.8_87998790_88023691_1	chr1	+	602	2	NNC	ENSMUSG00000090124.8	novel	3231	5	NA	NA	15548	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	980	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCAAGGTACACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	87998789	88023691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_87998856_88023155
ENSMUSG00000090150.11_103993419_104004458_1	chr9	+	1005	4	ISM	ENSMUSG00000090150.11	ENSMUST00000047799.13	3444	20	52534	466	52487	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATGTCAGAGCTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	103993418	104004458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_103993519_104000245_104000363_104001216_104001327_104003780
ENSMUSG00000090165.9_87983203_88023556_1	chr1	+	712	2	FSM	ENSMUSG00000090124.8	ENST00000447084.1	808	2	-39	135	-39	-135	multi-exon	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTGACTATGACAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	87983202	88023556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_87983514_88023155
ENSMUSG00000090165.9_87983203_88023556_2	chr1	+	711	2	NNC	ENSMUSG00000090124.8	novel	808	2	NA	NA	-39	-135	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTGACTATGACAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	87983202	88023556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_87983514_88023156
ENSMUSG00000090173.9_62737958_62744123_1	chr11	+	1154	3	ISM	ENSMUSG00000090173.9	ENST00000395906.8	2069	11	-78	20232	0	-20232	intron_retention	FALSE	canonical	NA	NA	NA	NA	1308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTAAGCCAGCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	62737957	62744123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62738622_62741397_62741499_62743734
ENSMUSG00000090173.9_62738287_62748534_1	chr11	+	1066	5	ISM	ENSMUSG00000090173.9	ENST00000308799.8	3420	12	392	19751	251	-15821	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCAGAACCAGGAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	62738286	62748534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62738622_62741397_62741499_62743734_62744219_62746111_62746235_62748511
ENSMUSG00000090173.9_62738422_62750723_1	chr11	+	1076	6	ISM	ENSMUSG00000090173.9	ENST00000308799.8	3420	12	527	17562	386	-13632	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	997	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGGAAGATCCACCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	62738421	62750723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62738622_62741397_62741499_62743734_62744219_62746111_62746235_62748511_62748622_62750665
ENSMUSG00000090173.9_62738475_62750771_1	chr11	+	1071	6	ISM	ENSMUSG00000090173.9	ENST00000308799.8	3420	12	580	17514	439	-13584	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	981	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGAGTTCCGAGGCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	62738474	62750771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62738622_62741397_62741499_62743734_62744219_62746111_62746235_62748511_62748622_62750665
ENSMUSG00000090173.9_62738536_62750812_1	chr11	+	1051	6	ISM	ENSMUSG00000090173.9	ENST00000308799.8	3420	12	641	17473	500	-13543	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	826	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTCTGAGGAGGACAATA	NA	NA	NA	NA	NA	NA	NA	NA	62738535	62750812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62738622_62741397_62741499_62743734_62744219_62746111_62746235_62748511_62748622_62750665
ENSMUSG00000090173.9_62741393_62753577_1	chr11	+	1146	6	ISM	ENSMUSG00000090173.9	ENST00000308799.8	3420	12	3498	14708	3357	-10778	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAAATTTGCATTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	62741392	62753577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62741499_62743734_62744219_62746111_62746235_62748511_62748622_62750665_62750867_62753455
ENSMUSG00000090173.9_62743780_62758416_1	chr11	+	1065	6	ISM	ENSMUSG00000090173.9	ENST00000308799.8	3420	12	5885	9869	5744	-5939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAGACCTACATTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	62743779	62758416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62744219_62746111_62746235_62748511_62748622_62750665_62750867_62753455_62753578_62758346
ENSMUSG00000090173.9_62744061_62764302_1	chr11	+	1112	8	ISM	ENSMUSG00000090173.9	ENST00000395906.8	2069	11	6025	53	6025	-53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCGACGCCAGAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	62744060	62764302	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62744219_62746111_62746235_62748511_62748622_62750665_62750867_62753455_62753578_62758346_62758496_62759837_62759981_62764196
ENSMUSG00000090173.9_62744203_62765800_1	chr11	+	1056	9	ISM	ENSMUSG00000090173.9	ENSMUST00000150989.8	3267	13	6254	2488	6167	1445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCAGTTTGAAAATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	62744202	62765800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62744219_62746111_62746235_62748511_62748622_62750665_62750867_62753455_62753578_62758346_62758496_62759837_62759981_62764196_62764356_62765767
ENSMUSG00000090173.9_62746155_62765862_1	chr11	+	1059	8	ISM	ENSMUSG00000090173.9	ENSMUST00000150989.8	3267	13	8206	2426	8119	1507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACAAAGAGGAGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	62746154	62765862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62746235_62748511_62748622_62750665_62750867_62753455_62753578_62758346_62758496_62759837_62759981_62764196_62764356_62765767
ENSMUSG00000090173.9_62746205_62765915_1	chr11	+	1062	8	ISM	ENSMUSG00000090173.9	ENSMUST00000150989.8	3267	13	8256	2373	8169	1560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACCATTCAGGGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	62746204	62765915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62746235_62748511_62748622_62750665_62750867_62753455_62753578_62758346_62758496_62759837_62759981_62764196_62764356_62765767
ENSMUSG00000090173.9_62748510_62766039_1	chr11	+	1158	7	ISM	ENSMUSG00000090173.9	ENSMUST00000150989.8	3267	13	10561	2249	10474	1684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	62748509	62766039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62748622_62750665_62750867_62753455_62753578_62758346_62758496_62759837_62759981_62764196_62764356_62765767
ENSMUSG00000090173.9_62750666_62767579_1	chr11	+	1169	7	ISM	ENSMUSG00000090173.9	ENST00000308799.8	3420	12	12771	706	12630	-690	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCCCCATAGGCCCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	62750665	62767579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62750867_62753455_62753578_62758346_62758496_62759837_62759981_62764196_62764356_62765767_62766033_62767449
ENSMUSG00000090173.9_62753494_62767707_1	chr11	+	1058	6	ISM	ENSMUSG00000090173.9	ENST00000308799.8	3420	12	15599	578	15458	-562	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTACAGGTGTGAGACAA	NA	NA	NA	NA	NA	NA	NA	NA	62753493	62767707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62753578_62758346_62758496_62759837_62759981_62764196_62764356_62765767_62766033_62767449
ENSMUSG00000090173.9_62758391_62767834_1	chr11	+	1057	5	ISM	ENSMUSG00000090173.9	ENST00000308799.8	3420	12	20496	451	20355	-435	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTCTGACAGCTTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	62758390	62767834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62758496_62759837_62759981_62764196_62764356_62765767_62766033_62767449
ENSMUSG00000090173.9_62758428_62767898_1	chr11	+	1084	5	ISM	ENSMUSG00000090173.9	ENST00000308799.8	3420	12	20533	387	20392	-371	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCCCCCTGACCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	62758427	62767898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62758496_62759837_62759981_62764196_62764356_62765767_62766033_62767449
ENSMUSG00000090173.9_62759899_62768054_1	chr11	+	1111	4	ISM	ENSMUSG00000090173.9	ENST00000308799.8	3420	12	22004	231	21863	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAGGAAAAAGAATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	62759898	62768054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62759981_62764196_62764356_62765767_62766033_62767449
ENSMUSG00000090173.9_62764269_62768269_1	chr11	+	1172	3	ISM	ENSMUSG00000090173.9	ENST00000308799.8	3420	12	26374	16	26233	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTACAACAAACTGAAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	62764268	62768269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_62764356_62765767_62766033_62767449
ENSMUSG00000090210.8_96556444_96559832_1	chr3	+	909	8	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	98	11333	98	-11333	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGGACGGAATAACTAAT	NA	NA	NA	NA	NA	NA	NA	NA	96556443	96559832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96556476_96556888_96557038_96557716_96557868_96558466_96558633_96558738_96558813_96559061_96559207_96559398_96559548_96559789
ENSMUSG00000090210.8_96556886_96559933_1	chr3	+	981	7	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	540	11232	540	-11232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAATCAGTGAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	96556885	96559933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96557038_96557716_96557868_96558466_96558633_96558738_96558813_96559061_96559207_96559398_96559548_96559789
ENSMUSG00000090210.8_96556989_96560124_1	chr3	+	928	8	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	643	11041	643	-11041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGGTTTGGCTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	96556988	96560124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96557038_96557716_96557868_96558466_96558633_96558738_96558813_96559061_96559207_96559398_96559548_96559789_96559934_96560074
ENSMUSG00000090210.8_96557716_96560278_1	chr3	+	1034	7	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	1370	10887	1370	-10887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGCAGTTCAGGGATAAG	NA	NA	NA	NA	NA	NA	NA	NA	96557715	96560278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96557868_96558466_96558633_96558738_96558813_96559061_96559207_96559398_96559548_96559789_96559934_96560074
ENSMUSG00000090210.8_96558466_96561058_1	chr3	+	1014	7	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	2120	10107	2120	-10107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAGCCCAGCTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	96558465	96561058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96558633_96558738_96558813_96559061_96559207_96559398_96559548_96559789_96559934_96560074_96560279_96560927
ENSMUSG00000090210.8_96558604_96562088_1	chr3	+	928	8	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	2258	9077	2258	-9077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGTGTGGTTCAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	96558603	96562088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96558633_96558738_96558813_96559061_96559207_96559398_96559548_96559789_96559934_96560074_96560279_96560927_96561059_96562036
ENSMUSG00000090210.8_96558736_96562203_1	chr3	+	1017	7	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	2390	8962	2390	-8962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGTTATAATGTATC	NA	NA	NA	NA	NA	NA	NA	NA	96558735	96562203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96558813_96559061_96559207_96559398_96559548_96559789_96559934_96560074_96560279_96560927_96561059_96562036
ENSMUSG00000090210.8_96559095_96562326_1	chr3	+	925	7	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	2749	8839	2749	-8839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGATGAGTGGACCGCT	NA	NA	NA	NA	NA	NA	NA	NA	96559094	96562326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96559207_96559398_96559548_96559789_96559934_96560074_96560279_96560927_96561059_96562036_96562204_96562308
ENSMUSG00000090210.8_96559138_96562385_1	chr3	+	941	7	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	2792	8780	2792	-8780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTCGGCAGCTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	96559137	96562385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96559207_96559398_96559548_96559789_96559934_96560074_96560279_96560927_96561059_96562036_96562204_96562308
ENSMUSG00000090210.8_96559190_96562437_1	chr3	+	941	7	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	2844	8728	2844	-8728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCATGCACTGGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	96559189	96562437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96559207_96559398_96559548_96559789_96559934_96560074_96560279_96560927_96561059_96562036_96562204_96562308
ENSMUSG00000090210.8_96559477_96562887_1	chr3	+	927	7	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	3131	8278	3131	-8278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCCTGTGCTGGCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	96559476	96562887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96559548_96559789_96559934_96560074_96560279_96560927_96561059_96562036_96562204_96562308_96562452_96562820
ENSMUSG00000090210.8_96559787_96563191_1	chr3	+	992	7	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	3441	7974	3441	-7974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGAGGGAGATGGACTAG	NA	NA	NA	NA	NA	NA	NA	NA	96559786	96563191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96559934_96560074_96560279_96560927_96561059_96562036_96562204_96562308_96562452_96562820_96562935_96563105
ENSMUSG00000090210.8_96559889_96563505_1	chr3	+	928	8	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	3543	7660	3543	-7660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCTGCGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	96559888	96563505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96559934_96560074_96560279_96560927_96561059_96562036_96562204_96562308_96562452_96562820_96562935_96563105_96563192_96563467
ENSMUSG00000090210.8_96560116_96563786_1	chr3	+	973	8	ISM	ENSMUSG00000090210.8	ENSMUST00000119365.8	5035	30	7216	8043	3770	-7379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTTCCCCCCATACCCG	NA	NA	NA	NA	NA	NA	NA	NA	96560115	96563786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96560279_96560927_96561059_96562036_96562204_96562308_96562452_96562820_96562935_96563105_96563192_96563467_96563610_96563759
ENSMUSG00000090210.8_96560195_96563810_1	chr3	+	918	8	ISM	ENSMUSG00000090210.8	ENSMUST00000119365.8	5035	30	7295	8019	3849	-7355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACCGTGGGGCATCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	96560194	96563810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96560279_96560927_96561059_96562036_96562204_96562308_96562452_96562820_96562935_96563105_96563192_96563467_96563610_96563759
ENSMUSG00000090210.8_96562027_96564827_1	chr3	+	1004	9	ISM	ENSMUSG00000090210.8	ENSMUST00000119365.8	5035	30	9127	7002	5681	-6338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAAGCTAGAGGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	96562026	96564827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96562204_96562308_96562452_96562820_96562935_96563105_96563192_96563467_96563610_96563759_96563850_96564011_96564089_96564249_96564340_96564742
ENSMUSG00000090210.8_96562138_96565021_1	chr3	+	945	10	ISM	ENSMUSG00000090210.8	ENSMUST00000119365.8	5035	30	9238	6808	5792	-6144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGCTGTAGCCCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	96562137	96565021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96562204_96562308_96562452_96562820_96562935_96563105_96563192_96563467_96563610_96563759_96563850_96564011_96564089_96564249_96564340_96564742_96564828_96564969
ENSMUSG00000090210.8_96562189_96565074_1	chr3	+	947	10	ISM	ENSMUSG00000090210.8	ENSMUST00000119365.8	5035	30	9289	6755	5843	-6091	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCAATGTGAGTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	96562188	96565074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96562204_96562308_96562452_96562820_96562935_96563105_96563192_96563467_96563610_96563759_96563850_96564011_96564089_96564249_96564340_96564742_96564828_96564969
ENSMUSG00000090210.8_96562309_96565355_1	chr3	+	1022	10	ISM	ENSMUSG00000090210.8	ENSMUST00000119365.8	5035	30	9409	6474	5963	-5810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGTCACAGGAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	96562308	96565355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96562452_96562820_96562935_96563105_96563192_96563467_96563610_96563759_96563850_96564011_96564089_96564249_96564340_96564742_96564828_96564969_96565084_96565274
ENSMUSG00000090210.8_96562820_96565602_1	chr3	+	994	10	ISM	ENSMUSG00000090210.8	ENSMUST00000119365.8	5035	30	9920	6227	6474	-5563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCCGTTCTTCCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	96562819	96565602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96562935_96563105_96563192_96563467_96563610_96563759_96563850_96564011_96564089_96564249_96564340_96564742_96564828_96564969_96565084_96565274_96565356_96565488
ENSMUSG00000090210.8_96563105_96569235_1	chr3	+	976	10	ISM	ENSMUSG00000090210.8	ENSMUST00000119365.8	5035	30	10205	2594	6759	-1930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGTGGAGCTGGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	96563104	96569235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96563192_96563467_96563610_96563759_96563850_96564011_96564089_96564249_96564340_96564742_96564828_96564969_96565084_96565274_96565356_96565488_96565603_96569139
ENSMUSG00000090210.8_96563466_96570024_1	chr3	+	1005	10	ISM	ENSMUSG00000090210.8	ENSMUST00000119365.8	5035	30	10566	1805	7120	-1141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCCAGCATCTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	96563465	96570024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96563610_96563759_96563850_96564011_96564089_96564249_96564340_96564742_96564828_96564969_96565084_96565274_96565356_96565488_96565603_96569139_96569236_96569910
ENSMUSG00000090210.8_96563565_96570304_1	chr3	+	930	11	ISM	ENSMUSG00000090210.8	ENSMUST00000119365.8	5035	30	10665	1525	7219	-861	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCCCCAAAGAAGAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	96563564	96570304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96563610_96563759_96563850_96564011_96564089_96564249_96564340_96564742_96564828_96564969_96565084_96565274_96565356_96565488_96565603_96569139_96569236_96569910_96570025_96570280
ENSMUSG00000090210.8_96563753_96570447_1	chr3	+	1035	10	ISM	ENSMUSG00000090210.8	ENSMUST00000119365.8	5035	30	10853	1382	7407	-718	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGTGTCTCCAGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	96563752	96570447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96563850_96564011_96564089_96564249_96564340_96564742_96564828_96564969_96565084_96565274_96565356_96565488_96565603_96569139_96569236_96569910_96570025_96570280
ENSMUSG00000090210.8_96564991_96570707_1	chr3	+	925	6	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	8645	458	8645	-458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGGTTATCCTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	96564990	96570707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96565084_96565274_96565356_96565488_96565603_96569139_96569236_96569910_96570025_96570280
ENSMUSG00000090210.8_96565037_96570773_1	chr3	+	945	6	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	8691	392	8691	-392	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGCCTGCTCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	96565036	96570773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96565084_96565274_96565356_96565488_96565603_96569139_96569236_96569910_96570025_96570280
ENSMUSG00000090210.8_96565341_96570886_1	chr3	+	945	5	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	8995	279	8995	-279	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGTCAACAGGAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	96565340	96570886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96565356_96565488_96565603_96569139_96569236_96569910_96570025_96570280
ENSMUSG00000090210.8_96569909_96571165_1	chr3	+	1001	2	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	13563	0	13563	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTGGTGACAATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	96569908	96571165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_96570025_96570280
ENSMUSG00000090213.2_167484962_167486816_1	chr2	-	1274	2	ISM	ENSMUSG00000090213.2	ENST00000371650.9	1762	6	16686	-150	16660	150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACCCTGGATCTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	167486816	167484961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_167486103_167486683
ENSMUSG00000090247.8_128755783_128758595_1	chr10	-	400	3	ISM	ENSMUSG00000090247.8	ENSMUST00000026405.10	550	4	798	0	798	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTGTTTGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	128758595	128755782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128755977_128756427_128756561_128758522
ENSMUSG00000090247.8_128755783_128758596_1	chr10	-	396	3	NNC	ENSMUSG00000090247.8	novel	550	4	NA	NA	797	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTGTTTGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	128758596	128755782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_128755977_128756427_128756561_128758527
ENSMUSG00000090266.11_116739727_116740455_1	chr11	+	563	3	ISM	ENSMUSG00000090266.11	ENST00000586752.5	639	4	5206	-37	-1	20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3531	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCAATGGGTATGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	116739726	116740455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_116739965_116740041_116740127_116740215
ENSMUSG00000090266.11_116739833_116740455_1	chr11	+	457	3	ISM	ENSMUSG00000090266.11	ENST00000586752.5	639	4	5312	-37	105	20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2475	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCAATGGGTATGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	116739832	116740455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_116739965_116740041_116740127_116740215
ENSMUSG00000090272.10_173684786_173702012_1	chr1	-	1494	7	ISM	ENSMUSG00000090272.10	ENSMUST00000188804.7	2026	10	5859	0	1414	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATTATATAGTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	173702012	173684785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_173685077_173687741_173687931_173690026_173690450_173692964_173693124_173698943_173699112_173700417_173700586_173701916
ENSMUSG00000090314.3_92775958_92776642_2	chr3	-	625	2	FSM	ENSMUSG00000090314.3	ENST00000368775.3	950	2	39	286	39	-286	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGGTTGCGGCGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	92776642	92775957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_92776421_92776480
ENSMUSG00000090326.3_62969185_62976009_1	chr5	+	368	2	NNC	ENSMUSG00000090326.3	novel	2264	9	NA	NA	168	-69641	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGAGTTGGTCAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	62969184	62976009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_62969425_62975881
ENSMUSG00000090326.3_62975951_62979345_1	chr5	+	381	2	ISM	ENSMUSG00000090326.3	ENSMUST00000170704.2	2427	9	4785	66306	4785	-66305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATATCCTTCAGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	62975950	62979345	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_62976213_62979226
ENSMUSG00000090326.3_62979331_62996633_1	chr5	+	378	3	ISM	ENSMUSG00000090326.3	ENSMUST00000170704.2	2427	9	8165	49018	8165	-49017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTACTAGGATTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	62979330	62996633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_62979407_62984361_62984613_62996582
ENSMUSG00000090326.3_62984447_63000199_1	chr5	+	370	3	ISM	ENSMUSG00000090326.3	ENSMUST00000170704.2	2427	9	13281	45452	13281	-45451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGTTTCTTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	62984446	63000199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_62984613_62996582_62996748_63000160
ENSMUSG00000090326.3_62984558_63000303_1	chr5	+	363	3	ISM	ENSMUSG00000090326.3	ENSMUST00000170704.2	2427	9	13392	45348	13392	-45347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGTACCTTCTAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	62984557	63000303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_62984613_62996582_62996748_63000160
ENSMUSG00000090326.3_62996628_63000424_1	chr5	+	384	2	ISM	ENSMUSG00000090326.3	ENSMUST00000170704.2	2427	9	25462	45227	25462	-45226	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGGAAACATATTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	62996627	63000424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_62996748_63000160
ENSMUSG00000090326.3_63000205_63007199_1	chr5	+	374	2	ISM	ENSMUSG00000090326.3	ENSMUST00000170704.2	2427	9	29039	38452	29039	-38451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTTTACAAAGTACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	63000204	63007199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_63000448_63007068
ENSMUSG00000090326.3_63000364_63039664_1	chr5	+	381	3	ISM	ENSMUSG00000090326.3	ENSMUST00000170704.2	2427	9	29198	5987	29198	-5986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGACTCTTGGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	63000363	63039664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_63000448_63007068_63007308_63039606
ENSMUSG00000090386.11_77033207_77036061_1	chr16	+	669	3	FSM	ENSMUSG00000090386.11	ENST00000653809.1	721	3	52	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	965	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTAGCTGAGGATGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	77033206	77036061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_77033224_77033852_77034139_77035695
ENSMUSG00000090553.9_133531614_133534317_1	chr1	-	278	2	NNC	ENSMUSG00000090553.9	novel	360	4	NA	NA	3636	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACATTGTTTCATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	133534317	133531613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_133531815_133534240
ENSMUSG00000090553.9_133531634_133536697_1	chr1	-	323	3	ISM	ENSMUSG00000090553.9	ENSMUST00000166915.8	503	5	1332	25	1256	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAAGTTTTTGTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	133536697	133531633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_133531815_133534238_133534318_133536634
ENSMUSG00000090553.9_133531797_133538008_1	chr1	-	281	4	NNC	ENSMUSG00000090553.9	novel	503	5	NA	NA	-21	-183	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATAATATTACTCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	133538008	133531796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_133531815_133534238_133534318_133536634_133536698_133537887
ENSMUSG00000090555.2_103784256_103788247_1	chr12	-	846	4	FSM	ENSMUSG00000090555.2	ENSMUST00000172146.2	1242	4	255	141	255	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCTACAGTCTTACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	103788247	103784255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_103784307_103785107_103785259_103786143_103786415_103787874
ENSMUSG00000090555.2_103786142_103788506_1	chr12	-	905	2	ISM	ENSMUSG00000090555.2	ENSMUST00000172146.2	1242	4	-4	2027	-4	-1885	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACCCAGACAGAGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	103788506	103786141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_103786415_103787874
ENSMUSG00000090555.2_103786302_103794272_1	chr12	-	788	3	ISM	ENSMUSG00000090555.2	ENST00000636712.1	1181	5	34	2045	34	-2045	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATTGCAGCACGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	103794272	103786301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_-_103786415_103787874_103788507_103794229
ENSMUSG00000090841.3_128326843_128328005_1	chr10	-	183	3	ISM	ENSMUSG00000090841.3	ENSMUST00000218127.2	691	7	1721	113	1688	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTGATTTCTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	128328005	128326842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128326903_128327588_128327634_128327927
ENSMUSG00000090841.3_128326843_128328151_1	chr10	-	237	4	ISM	ENSMUSG00000090841.3	ENSMUST00000218127.2	691	7	1575	113	1542	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTGATTTCTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	128328151	128326842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128326903_128327588_128327634_128327927_128328006_128328097
ENSMUSG00000090841.3_128326843_128328151_2	chr10	-	192	3	ISM	ENSMUSG00000090841.3	ENSMUST00000217969.2	608	6	1575	111	1542	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTGATTTCTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	128328151	128326842	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128326903_128327927_128328006_128328097
ENSMUSG00000090841.3_128328215_128328617_1	chr10	-	204	2	ISM	ENSMUSG00000090841.3	ENSMUST00000217776.2	562	7	1076	1372	1076	-1372	internal_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGAACAAGGACCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	128328617	128328214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128328272_128328470
ENSMUSG00000090841.3_128328215_128329443_1	chr10	-	237	3	ISM	ENSMUSG00000090841.3	ENSMUST00000217776.2	562	7	250	1372	250	-1372	internal_fragment	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGAACAAGGACCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	128329443	128328214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128328272_128328470_128328615_128329407
ENSMUSG00000090841.3_128328471_128329726_1	chr10	-	221	3	ISM	ENSMUSG00000090841.3	ENSMUST00000217776.2	562	7	-33	1628	0	-1628	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCATTTCAAGAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	128329726	128328470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128328615_128329407_128329436_128329677
ENSMUSG00000090862.4_115930740_115932301_1	chr7	-	318	3	ISM	ENSMUSG00000090862.4	ENSMUST00000170953.3	589	6	1129	0	1067	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTGGTTCTTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	115932301	115930739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_115930819_115931613_115931715_115932163
ENSMUSG00000090862.4_115930747_115932962_1	chr7	-	375	4	ISM	ENSMUSG00000090862.4	ENSMUST00000170953.3	589	6	468	7	406	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGTGTTTTGTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	115932962	115930746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_115930819_115931613_115931715_115932163_115932334_115932930
ENSMUSG00000090862.4_115931701_115933370_1	chr7	-	363	5	FSM	ENSMUSG00000090862.4	ENSMUST00000205490.2	1317	5	-2	956	-2	-956	multi-exon	FALSE	canonical	NA	NA	NA	NA	2981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCGCCTGATTCTGATAG	NA	NA	NA	NA	NA	NA	NA	NA	115933370	115931700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_115931715_115932163_115932334_115932930_115933010_115933134_115933184_115933319
ENSMUSG00000090862.4_115932275_115933401_1	chr7	-	269	4	ISM	ENSMUSG00000090862.4	ENSMUST00000205490.2	1317	5	-33	1530	29	-1530	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGAGAATCCTCAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	115933401	115932274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_115932334_115932930_115933010_115933134_115933184_115933319
ENSMUSG00000090952.3_33979226_33980590_1	chr17	+	411	2	FSM	ENSMUSG00000090952.3	ENSMUST00000170103.3	925	2	260	254	260	-254	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAGCCAACTTTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	33979225	33980590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_33979562_33980515
ENSMUSG00000090952.3_33979290_33980665_1	chr17	+	422	2	FSM	ENSMUSG00000090952.3	ENSMUST00000170103.3	925	2	324	179	324	-179	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCAGTGGTTAAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	33979289	33980665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_33979562_33980515
ENSMUSG00000090952.3_33979461_33980844_1	chr17	+	430	2	FSM	ENSMUSG00000090952.3	ENSMUST00000170103.3	925	2	495	0	495	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCTGATTTCATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	33979460	33980844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_33979562_33980515
ENSMUSG00000091028.2_3001363_3002330_1	chr9	+	501	2	NNC	ENSMUSG00000091028.2	novel	651	4	NA	NA	441	0	intron_retention	TRUE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3001362	3002330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_3001524_3001990
ENSMUSG00000091119.3_3309891_3310567_1	chr15	-	404	2	ISM	ENSMUSG00000091119.3	ENST00000388827.4	872	6	20111	52	20111	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCATAGGACTTAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	3310567	3309890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_3310232_3310504
ENSMUSG00000091119.3_3310109_3323403_1	chr15	-	404	4	ISM	ENSMUSG00000091119.3	ENST00000388827.4	872	6	7275	270	7275	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGCACTTAATGCATTA	NA	NA	NA	NA	NA	NA	NA	NA	3323403	3310108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_3310232_3310504_3310589_3312299_3312428_3323334
ENSMUSG00000091119.3_3310217_3327688_1	chr15	-	402	5	ISM	ENSMUSG00000091119.3	ENST00000388827.4	872	6	2990	378	2990	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGGAAGAAAAGAGCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	3327688	3310216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_3310232_3310504_3310589_3312299_3312428_3323334_3323404_3327582
ENSMUSG00000091119.3_3312300_3330678_1	chr15	-	395	4	ISM	ENSMUSG00000091119.3	ENST00000388827.4	872	6	0	2461	0	-2191	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGTTTATGAGTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	3330678	3312299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_3312428_3323334_3323404_3327582_3327689_3330586
ENSMUSG00000091243.3_65612327_65657681_1	chr16	+	1252	4	FSM	ENSMUSG00000091243.3	ENSMUST00000168064.3	7009	4	184	5573	112	-484	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGACACAGGAAATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	65612326	65657681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_65612645_65624779_65625063_65636094_65636620_65657555
ENSMUSG00000091243.3_65612380_65657734_1	chr16	+	1252	4	FSM	ENSMUSG00000091243.3	ENSMUST00000168064.3	7009	4	237	5520	-135	-431	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTTGAACCTTTTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	65612379	65657734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_65612645_65624779_65625063_65636094_65636620_65657555
ENSMUSG00000091243.3_65612515_65657946_1	chr16	+	1329	4	FSM	ENSMUSG00000091243.3	ENSMUST00000168064.3	7009	4	372	5308	0	-219	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTCATTTCTTCAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	65612514	65657946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_65612645_65624779_65625063_65636094_65636620_65657555
ENSMUSG00000091243.3_65624860_65658165_1	chr16	+	1338	3	ISM	ENSMUSG00000091243.3	ENSMUST00000227997.2	1383	4	12345	0	12345	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTTCCGAGGGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	65624859	65658165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_65625063_65636094_65636620_65657555
ENSMUSG00000091243.3_65624909_65658165_1	chr16	+	1289	3	ISM	ENSMUSG00000091243.3	ENSMUST00000227997.2	1383	4	12394	0	12394	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTTCCGAGGGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	65624908	65658165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_65625063_65636094_65636620_65657555
ENSMUSG00000091243.3_65624984_65658233_1	chr16	+	1282	3	ISM	ENSMUSG00000091243.3	ENSMUST00000227997.2	1383	4	12469	-68	12469	-63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACATTGTGTTCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	65624983	65658233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_65625063_65636094_65636620_65657555
ENSMUSG00000091512.6_137624287_137634528_1	chr3	+	1292	7	NNC	ENSMUSG00000091512.6	novel	1295	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1964	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTGTATAGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	137624286	137634528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_137624425_137624638_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
ENSMUSG00000091512.6_137624287_137634528_3	chr3	+	1288	7	NNC	ENSMUSG00000091512.6	novel	1295	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1964	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTGTATAGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	137624286	137634528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_137624425_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633116_137633172_137633707
ENSMUSG00000091519.2_76946282_76950405_1	chr18	+	844	2	NNC	ENSMUSG00000091519.2	novel	847	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCTGGGAACACACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	76946281	76950405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_76947054_76950333
ENSMUSG00000091519.2_76946282_76950405_2	chr18	+	845	2	FSM	ENSMUSG00000091519.2	ENST00000400404.1	847	2	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCTGGGAACACACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	76946281	76950405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_76947054_76950332
ENSMUSG00000091519.2_76946282_76950405_3	chr18	+	840	2	NNC	ENSMUSG00000091519.2	novel	847	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCTGGGAACACACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	76946281	76950405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_76947049_76950332
ENSMUSG00000091537.3_108906955_108911655_1	chr9	-	938	4	NNC	ENSMUSG00000091537.3	novel	944	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2576	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGGGGTTGCCATGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	108911655	108906954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_108907488_108911069_108911158_108911238_108911295_108911394
ENSMUSG00000091625.9_56678231_56680351_1	chr6	-	198	4	ISM	ENSMUSG00000091625.9	ENSMUST00000170382.5	494	5	1326	183	1317	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACGTTGTTTTCAAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	56680351	56678230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_56678275_56679080_56679154_56679990_56680019_56680298
ENSMUSG00000091625.9_56679092_56681641_1	chr6	-	220	4	ISM	ENSMUSG00000091625.9	ENSMUST00000170382.5	494	5	36	1044	27	-861	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAACAATGGTAAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	56681641	56679091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_56679154_56679990_56680019_56680298_56680395_56681607
ENSMUSG00000091896.9_35904963_35932925_1	chr18	+	199	3	ISM	ENSMUSG00000091896.9	ENSMUST00000167406.2	2393	8	308	7291	308	-7291	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTCACTTTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	35904962	35932925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35905066_35926517_35926582_35932893
ENSMUSG00000091898.9_30930269_30933686_1	chr14	+	712	6	NNC	ENSMUSG00000091898.9	novel	721	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTCCTGGGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	30930268	30933686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_30930336_30931759_30931791_30932016_30932164_30932520_30932627_30933236_30933374_30933462
ENSMUSG00000091900.4_115682602_115683793_1	chr7	-	979	2	FSM	ENSMUSG00000091900.4	ENST00000422734.1	916	2	0	-63	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCAGGAGCTGGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	115683793	115682601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_115683220_115683432
ENSMUSG00000092009.2_48881870_48961847_1	chr16	+	3070	23	NIC	ENSMUSG00000092009.2	novel	5783	39	NA	NA	4021	-55412	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGAGAGCAGCCGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	48881869	48961847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr16_+_48881952_48885318_48885463_48889746_48889904_48891369_48891497_48898991_48899085_48901533_48901598_48901680_48901777_48911437_48911542_48913016_48913156_48916792_48916912_48920442_48920593_48921835_48922007_48929626_48929804_48930755_48930889_48933427_48933496_48934363_48934452_48936573_48936692_48937535_48937660_48940310_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744
ENSMUSG00000092009.2_48881923_48961902_1	chr16	+	3072	23	NIC	ENSMUSG00000092009.2	novel	5783	39	NA	NA	4074	-55357	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTAACTGCCAAGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	48881922	48961902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr16_+_48881952_48885318_48885463_48889746_48889904_48891369_48891497_48898991_48899085_48901533_48901598_48901680_48901777_48911437_48911542_48913016_48913156_48916792_48916912_48920442_48920593_48921835_48922007_48929626_48929804_48930755_48930889_48933427_48933496_48934363_48934452_48936573_48936692_48937535_48937660_48940310_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744
ENSMUSG00000092009.2_48885399_48965464_1	chr16	+	3105	24	ISM	ENSMUSG00000092009.2	ENST00000273353.4	5783	39	7560	51795	7550	-51795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGAGAAAGGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	48885398	48965464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48885463_48889746_48889908_48891369_48891497_48898991_48899085_48901533_48901598_48901680_48901777_48911437_48911542_48913016_48913156_48916792_48916912_48920442_48920593_48921835_48922007_48929626_48929804_48930755_48930889_48933427_48933496_48934363_48934452_48936573_48936692_48937535_48937660_48940310_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744_48961891_48963278_48963370_48965405
ENSMUSG00000092009.2_48889819_48965577_1	chr16	+	3082	23	ISM	ENSMUSG00000092009.2	ENST00000273353.4	5783	39	11980	51682	11970	-51682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTCAGAAGCTTCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	48889818	48965577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48889908_48891369_48891497_48898991_48899085_48901533_48901598_48901680_48901777_48911437_48911542_48913016_48913156_48916792_48916912_48920442_48920593_48921835_48922007_48929626_48929804_48930755_48930889_48933427_48933496_48934363_48934452_48936573_48936692_48937535_48937660_48940310_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744_48961891_48963278_48963370_48965405
ENSMUSG00000092009.2_48889883_48965638_1	chr16	+	3079	23	ISM	ENSMUSG00000092009.2	ENST00000273353.4	5783	39	12044	51621	12034	-51621	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTTTGAAAAAGAGACACG	NA	NA	NA	NA	NA	NA	NA	NA	48889882	48965638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48889908_48891369_48891497_48898991_48899085_48901533_48901598_48901680_48901777_48911437_48911542_48913016_48913156_48916792_48916912_48920442_48920593_48921835_48922007_48929626_48929804_48930755_48930889_48933427_48933496_48934363_48934452_48936573_48936692_48937535_48937660_48940310_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744_48961891_48963278_48963370_48965405
ENSMUSG00000092009.2_48901555_48973536_1	chr16	+	3076	21	ISM	ENSMUSG00000092009.2	ENST00000273353.4	5783	39	23716	43723	23706	-43723	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGCTACAGAGTGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	48901554	48973536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48901598_48901680_48901777_48911437_48911542_48913016_48913156_48916792_48916912_48920442_48920593_48921835_48922007_48929626_48929804_48930755_48930889_48933427_48933496_48934363_48934452_48936573_48936692_48937535_48937660_48940310_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744_48961891_48963278_48963370_48965405_48965796_48973430
ENSMUSG00000092009.2_48916827_48980120_1	chr16	+	3091	20	ISM	ENSMUSG00000092009.2	ENST00000273353.4	5783	39	38988	37139	38978	-37139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTGGGGGATGCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	48916826	48980120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48916912_48920442_48920593_48921835_48922007_48929626_48929804_48930755_48930889_48933427_48933496_48934363_48934452_48936573_48936692_48937535_48937660_48940310_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744_48961891_48963278_48963370_48965405_48965796_48973430_48973558_48973817_48973932_48975878_48976076_48980021
ENSMUSG00000092009.2_48920568_48980344_1	chr16	+	3105	19	ISM	ENSMUSG00000092009.2	ENST00000273353.4	5783	39	42729	36915	42719	-36915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAGGCAGAACCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	48920567	48980344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48920593_48921835_48922007_48929626_48929804_48930755_48930889_48933427_48933496_48934363_48934452_48936573_48936692_48937535_48937660_48940310_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744_48961891_48963278_48963370_48965405_48965796_48973430_48973558_48973817_48973932_48975878_48976076_48980021
ENSMUSG00000092009.2_48921941_48983447_1	chr16	+	3071	19	ISM	ENSMUSG00000092009.2	ENST00000273353.4	5783	39	44102	33812	44092	-33812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTTGATTGAACAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	48921940	48983447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48922007_48929626_48929804_48930755_48930889_48933427_48933496_48934363_48934452_48936573_48936692_48937535_48937660_48940310_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744_48961891_48963278_48963370_48965405_48965796_48973430_48973558_48973817_48973932_48975878_48976076_48980021_48980372_48983378
ENSMUSG00000092009.2_48929625_48986265_1	chr16	+	3180	19	ISM	ENSMUSG00000092009.2	ENST00000273353.4	5783	39	51786	30994	51776	-30994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAGGATTACGTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	48929624	48986265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48929804_48930755_48930889_48933427_48933496_48934363_48934452_48936573_48936692_48937535_48937660_48940310_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744_48961891_48963278_48963370_48965405_48965796_48973430_48973558_48973817_48973932_48975878_48976076_48980021_48980372_48983378_48983504_48986148
ENSMUSG00000092009.2_48930803_48992381_1	chr16	+	3074	19	ISM	ENSMUSG00000092009.2	ENST00000273353.4	5783	39	52964	24878	52954	-24878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTGTGCTGCCAACCG	NA	NA	NA	NA	NA	NA	NA	NA	48930802	48992381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48930889_48933427_48933496_48934363_48934452_48936573_48936692_48937535_48937660_48940310_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744_48961891_48963278_48963370_48965405_48965796_48973430_48973558_48973817_48973932_48975878_48976076_48980021_48980372_48983378_48983504_48986148_48986265_48992260
ENSMUSG00000092009.2_48930847_48992445_1	chr16	+	3094	19	ISM	ENSMUSG00000092009.2	ENST00000273353.4	5783	39	53008	24814	52998	-24814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAGGTACTTTGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	48930846	48992445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48930889_48933427_48933496_48934363_48934452_48936573_48936692_48937535_48937660_48940310_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744_48961891_48963278_48963370_48965405_48965796_48973430_48973558_48973817_48973932_48975878_48976076_48980021_48980372_48983378_48983504_48986148_48986265_48992260
ENSMUSG00000092009.2_48934394_48993410_1	chr16	+	3080	18	ISM	ENSMUSG00000092009.2	ENST00000273353.4	5783	39	56555	23849	56545	-23849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAGCAGACAGAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	48934393	48993410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48934452_48936573_48936692_48937535_48937660_48940310_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744_48961891_48963278_48963370_48965405_48965796_48973430_48973558_48973817_48973932_48975878_48976076_48980021_48980372_48983378_48983504_48986148_48986265_48992260_48992454_48993292
ENSMUSG00000092009.2_48936613_48997341_1	chr16	+	3097	18	ISM	ENSMUSG00000092009.2	ENST00000273353.4	5783	39	58774	19918	58764	-19918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGAGGCCGATGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	48936612	48997341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48936692_48937535_48937660_48940310_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744_48961891_48963278_48963370_48965405_48965796_48973430_48973558_48973817_48973932_48975878_48976076_48980021_48980372_48983378_48983504_48986148_48986265_48992260_48992454_48993292_48993497_48997313
ENSMUSG00000092009.2_48937615_49003248_1	chr16	+	3087	18	ISM	ENSMUSG00000092009.2	ENST00000273353.4	5783	39	59776	14011	59766	-14011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGAGAGGATGAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	48937614	49003248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48937660_48940310_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744_48961891_48963278_48963370_48965405_48965796_48973430_48973558_48973817_48973932_48975878_48976076_48980021_48980372_48983378_48983504_48986148_48986265_48992260_48992454_48993292_48993497_48997313_48997440_49003198
ENSMUSG00000092009.2_48940309_49003371_1	chr16	+	3167	17	ISM	ENSMUSG00000092009.2	ENST00000273353.4	5783	39	62470	13888	62460	-13888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATTTGCTTGGGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	48940308	49003371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744_48961891_48963278_48963370_48965405_48965796_48973430_48973558_48973817_48973932_48975878_48976076_48980021_48980372_48983378_48983504_48986148_48986265_48992260_48992454_48993292_48993497_48997313_48997440_49003198
ENSMUSG00000092009.2_48952530_49017189_1	chr16	+	3096	19	ISM	ENSMUSG00000092009.2	ENST00000273353.4	5783	39	74691	70	74681	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGAGGCCGCAGAATCGC	NA	NA	NA	NA	NA	NA	NA	NA	48952529	49017189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_48952584_48957836_48958080_48959024_48959202_48961744_48961891_48963278_48963370_48965405_48965796_48973430_48973558_48973817_48973932_48975878_48976076_48980021_48980372_48983378_48983504_48986148_48986265_48992260_48992454_48993292_48993497_48997313_48997440_49003198_49003370_49007357_49007463_49015857_49015954_49017118
ENSMUSG00000092060.5_67555505_67575046_2	chr5	-	867	4	ISM	ENSMUSG00000092060.5	ENST00000611697.1	1288	5	9867	0	9867	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAGTCCAAAGCATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	67575046	67555504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_67555794_67557403_67557645_67562773_67562863_67574798
ENSMUSG00000092060.5_67557404_67584841_1	chr5	-	927	4	ISM	ENSMUSG00000092060.5	ENST00000611697.1	1288	5	72	1899	72	-1899	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGCATCCCTCCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	67584841	67557403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_67557645_67562773_67562863_67574798_67575366_67584811
ENSMUSG00000092060.5_67557490_67584860_1	chr5	-	860	4	ISM	ENSMUSG00000092060.5	ENST00000611697.1	1288	5	53	1985	53	-1985	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGAAAAGGAAAAGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	67584860	67557489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_67557645_67562773_67562863_67574798_67575366_67584811
ENSMUSG00000092074.3_6360454_6367693_1	chr17	-	1054	5	FSM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	82	2185	0	-2185	multi-exon	TRUE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCATGGCACACCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	6367693	6360453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6367648
ENSMUSG00000092074.3_6360507_6367732_1	chr17	-	1040	5	FSM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	43	2238	-39	-2238	multi-exon	FALSE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCTGTTTAATTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	6367732	6360506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6367648
ENSMUSG00000092274.4_5894010_5895065_1	chr19	-	887	2	NNC	ENSMUSG00000092274.4	novel	890	2	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCAGCGTGCTGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	5895065	5894009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_5894780_5894948
ENSMUSG00000092274.4_5894010_5895065_2	chr19	-	890	2	FSM	ENSMUSG00000092274.4	ENST00000499732.3	890	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCAGCGTGCTGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	5895065	5894009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5894783_5894948
ENSMUSG00000092341.4_5847229_5847932_1	chr19	-	606	2	FSM	ENSMUSG00000092341.4	ENST00000618132.1	622	2	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTATTCAAGGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	5847932	5847228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5847749_5847846
ENSMUSG00000092341.4_5851944_5852699_1	chr19	-	480	2	NNC	ENSMUSG00000092341.4	novel	485	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGACATACAGGAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	5852699	5851943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_5851990_5852265
ENSMUSG00000092471.2_34938500_34939186_1	chr17	-	603	2	ISM	ENSMUSG00000092471.2	ENST00000435122.3	1722	9	2043	33	2040	-33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGAGAGGGTTGTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	34939186	34938499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34939065_34939148
ENSMUSG00000092471.2_34938575_34939222_1	chr17	-	564	2	ISM	ENSMUSG00000092471.2	ENST00000435122.3	1722	9	2007	108	2004	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGGGTCGCAGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	34939222	34938574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34939065_34939148
ENSMUSG00000092471.2_34938644_34939254_1	chr17	-	527	2	ISM	ENSMUSG00000092471.2	ENSMUST00000172970.2	1383	9	1972	-143	1972	143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGCAGTCATACCGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	34939254	34938643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34939065_34939148
ENSMUSG00000092471.2_34938787_34939792_1	chr17	-	635	4	ISM	ENSMUSG00000092471.2	ENSMUST00000172970.2	1383	9	1434	0	1434	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGCCTAGTGCCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	34939792	34938786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34939065_34939148_34939253_34939320_34939491_34939709
ENSMUSG00000092471.2_34939001_34940062_1	chr17	-	577	5	ISM	ENSMUSG00000092471.2	ENSMUST00000172970.2	1383	9	1164	214	1164	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGAGAGCCTCTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	34940062	34939000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34939065_34939148_34939253_34939320_34939491_34939709_34939911_34940024
ENSMUSG00000092471.2_34939434_34940618_1	chr17	-	582	6	ISM	ENSMUSG00000092471.2	ENST00000435122.3	1722	9	611	967	608	-647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTACAGGAACCGAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	34940618	34939433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34939491_34939709_34939911_34940024_34940112_34940199_34940302_34940381_34940484_34940585
ENSMUSG00000092471.2_34939769_34941038_1	chr17	-	600	6	ISM	ENSMUSG00000092471.2	ENST00000435122.3	1722	9	191	1302	188	-982	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGACCACGGCTACCACG	NA	NA	NA	NA	NA	NA	NA	NA	34941038	34939768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34939911_34940024_34940112_34940199_34940302_34940381_34940484_34940585_34940724_34941009
ENSMUSG00000092471.2_34939823_34941090_1	chr17	-	598	6	ISM	ENSMUSG00000092471.2	ENST00000435122.3	1722	9	139	1356	136	-1036	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCACGAGGGGCACGTG	NA	NA	NA	NA	NA	NA	NA	NA	34941090	34939822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34939911_34940024_34940112_34940199_34940302_34940381_34940484_34940585_34940724_34941009
ENSMUSG00000092558.4_47922546_47934753_1	chr17	+	1425	4	FSM	ENSMUSG00000092558.4	ENSMUST00000024778.3	2054	4	39	590	39	510	multi-exon	FALSE	canonical	NA	NA	NA	NA	1889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGACACATGTTCCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	47922545	47934753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_47922618_47923887_47924043_47929733_47929988_47933809
ENSMUSG00000092558.4_47922546_47934840_1	chr17	+	1512	4	FSM	ENSMUSG00000092558.4	ENSMUST00000024778.3	2054	4	39	503	39	-503	multi-exon	FALSE	canonical	NA	NA	NA	NA	1971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTATTACTTACCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	47922545	47934840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_47922618_47923887_47924043_47929733_47929988_47933809
ENSMUSG00000092558.4_47923887_47930003_1	chr17	+	426	2	ISM	ENSMUSG00000092558.4	ENSMUST00000024778.3	2054	4	1380	5340	0	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAGCAGGATATGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	47923886	47930003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47924043_47929733
ENSMUSG00000092558.4_47923903_47933944_1	chr17	+	528	3	FSM	ENSMUSG00000092558.4	ENST00000265350.9	843	3	16	299	16	-299	multi-exon	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGATACCATGATACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	47923902	47933944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_47924047_47929738_47929988_47933809
ENSMUSG00000092558.4_47923955_47933993_1	chr17	+	525	3	FSM	ENSMUSG00000092558.4	ENST00000265350.9	843	3	68	250	68	-250	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCAAGTGCCAGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	47923954	47933993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_47924047_47929738_47929988_47933809
ENSMUSG00000092558.4_47924000_47934051_1	chr17	+	538	3	FSM	ENSMUSG00000092558.4	ENST00000265350.9	843	3	113	192	113	-192	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACCAGGGTAATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	47923999	47934051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_47924047_47929738_47929988_47933809
ENSMUSG00000092558.4_47929853_47934243_1	chr17	+	569	2	ISM	ENSMUSG00000092558.4	ENST00000265350.9	843	3	5966	0	5966	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGGGCAAAAGGTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	47929852	47934243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47929988_47933809
ENSMUSG00000092558.4_47929853_47934243_2	chr17	+	563	2	NNC	ENSMUSG00000092558.4	novel	843	3	NA	NA	5966	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGGGCAAAAGGTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	47929852	47934243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_47929982_47933809
ENSMUSG00000092558.4_47929853_47935173_1	chr17	+	1499	2	ISM	ENSMUSG00000092558.4	ENST00000265350.9	843	3	5966	-930	5966	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCGTTTTGGCCTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	47929852	47935173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_47929988_47933809
ENSMUSG00000092607.10_95036847_95041250_1	chr3	-	977	7	NNC	ENSMUSG00000092607.10	novel	1054	7	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCGCTGCCCTTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	95041250	95036846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_95037195_95037474_95037670_95040135_95040225_95040327_95040423_95040515_95040600_95040868_95040940_95041155
ENSMUSG00000092607.10_95036847_95041254_1	chr3	-	981	7	NNC	ENSMUSG00000092607.10	novel	1054	7	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCGCTGCCCTTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	95041254	95036846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_95037195_95037474_95037665_95040135_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ENSMUSG00000093445.8_137627440_137638922_1	chr5	+	2587	18	FSM	ENSMUSG00000093445.8	ENSMUST00000031734.16	3078	18	57	434	0	-434	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGTCCCCAGGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	137627439	137638922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ENSMUSG00000093445.8_137627561_137639031_1	chr5	+	2575	18	FSM	ENSMUSG00000093445.8	ENSMUST00000031734.16	3078	18	178	325	121	-325	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCCAGCCCCACCACA	NA	NA	NA	NA	NA	NA	NA	NA	137627560	137639031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ENSMUSG00000093445.8_137631885_137639205_1	chr5	+	2570	17	ISM	ENSMUSG00000093445.8	ENSMUST00000175968.8	2036	18	3493	-763	3493	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTAACAAGGACTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	137631884	137639205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ENSMUSG00000093445.8_137632108_137639361_1	chr5	+	2635	16	ISM	ENSMUSG00000093445.8	ENSMUST00000175968.8	2036	18	3716	-919	3716	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGTGTGCCTGCCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	137632107	137639361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ENSMUSG00000093483.2_83182792_83185458_1	chr11	+	250	2	ISM	ENSMUSG00000093483.2	ENSMUST00000176545.2	356	3	246	0	224	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTATTTGTTTGGGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	83182791	83185458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_83182924_83185340
ENSMUSG00000093661.2_99602096_99646530_1	chr6	-	2435	8	NNC	ENSMUSG00000093661.2	novel	2593	9	NA	NA	-2798	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGGCTCATGTTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	99646530	99602095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_99603669_99603747_99604015_99609217_99609374_99613069_99613137_99616123_99616181_99617576_99617672_99628679_99628753_99646383
ENSMUSG00000093661.2_99602096_99669132_1	chr6	-	2479	9	FSM	ENSMUSG00000093661.2	ENST00000295612.7	2593	9	103	11	103	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGGCTCATGTTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	99669132	99602095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_99603669_99603747_99604015_99609217_99609374_99613069_99613137_99616123_99616185_99617576_99617672_99628679_99628753_99646383_99646529_99669090
ENSMUSG00000093661.2_99602096_99669188_1	chr6	-	2535	9	FSM	ENSMUSG00000093661.2	ENST00000295612.7	2593	9	47	11	47	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGGCTCATGTTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	99669188	99602095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_99603669_99603747_99604015_99609217_99609374_99613069_99613137_99616123_99616185_99617576_99617672_99628679_99628753_99646383_99646529_99669090
ENSMUSG00000093661.2_99602096_99669227_1	chr6	-	2574	9	FSM	ENSMUSG00000093661.2	ENST00000295612.7	2593	9	8	11	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGGCTCATGTTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	99669227	99602095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_99603669_99603747_99604015_99609217_99609374_99613069_99613137_99616123_99616185_99617576_99617672_99628679_99628753_99646383_99646529_99669090
ENSMUSG00000093674.8_128383983_128385022_1	chr10	-	536	2	NNC	ENSMUSG00000093674.8	novel	544	3	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	14605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128385022	128383982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_128384299_128384802
ENSMUSG00000093674.8_128384281_128385022_1	chr10	-	130	4	FSM	ENSMUSG00000093674.8	ENSMUST00000176683.8	437	4	9	298	0	-292	multi-exon	FALSE	canonical	NA	NA	NA	NA	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGAGGCAGAGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	128385022	128384280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128384299_128384526_128384550_128384817_128384841_128384956
ENSMUSG00000093674.8_128384281_128385022_2	chr10	-	119	3	NNC	ENSMUSG00000093674.8	novel	544	3	NA	NA	0	-292	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGAGGCAGAGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	128385022	128384280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_128384299_128384526_128384550_128384944
ENSMUSG00000093674.8_128384281_128385022_3	chr10	-	124	3	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	0	-292	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGAGGCAGAGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	128385022	128384280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_128384299_128384802_128384843_128384956
ENSMUSG00000093674.8_128384818_128385070_1	chr10	-	139	2	ISM	ENSMUSG00000093674.8	ENSMUST00000176010.8	582	4	104	835	-39	-829	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCGGCTCTTAGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	128385070	128384817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128384843_128384956
ENSMUSG00000093674.8_128384818_128385174_1	chr10	-	243	2	ISM	ENSMUSG00000093674.8	ENSMUST00000176010.8	582	4	0	835	0	-829	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCGGCTCTTAGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	128385174	128384817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_128384843_128384956
ENSMUSG00000093904.3_127659516_127663934_1	chr8	-	2439	2	ISM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	8656	2099	8656	-2099	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTCAGAAAATGAAGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	127663934	127659515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_127661810_127663789
ENSMUSG00000093904.3_127659649_127667975_1	chr8	-	2433	4	ISM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	4615	2232	4615	2087	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATCTCTGTCCAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	127667975	127659648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928
ENSMUSG00000093904.3_127659764_127672412_1	chr8	-	2377	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	178	2347	178	1972	multi-exon	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCATGCTGCCTTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	127672412	127659763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ENSMUSG00000093904.3_127659834_127672450_1	chr8	-	2345	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	140	2417	140	1902	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACTGAGATAAAAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	127672450	127659833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ENSMUSG00000093904.3_127659894_127672594_1	chr8	-	2429	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	-4	2477	0	1842	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGATGGAAGCAGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	127672594	127659893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ENSMUSG00000093930.3_120152000_120164147_1	chr13	+	876	5	ISM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	18	5471	0	-5471	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTAGCTCGGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	120151999	120164147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_120152050_120161199_120161658_120162043_120162170_120162611_120162777_120164070
ENSMUSG00000093930.3_120156544_120168124_1	chr13	+	1723	10	ISM	ENSMUSG00000093930.3	ENSMUST00000224188.2	3464	11	4544	1672	4544	-1494	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGACACAGAGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	120156543	120168124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ENSMUSG00000093930.3_120162043_120168613_1	chr13	+	1715	8	ISM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	10061	1005	10043	-1005	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACGTGAGCAGAAAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	120162042	120168613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ENSMUSG00000093930.3_120162099_120168695_1	chr13	+	1741	8	ISM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	10117	923	10099	-923	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAACTTTTTGGCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	120162098	120168695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ENSMUSG00000093930.3_120162155_120168748_1	chr13	+	1738	8	ISM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	10173	870	10155	-870	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTGGAGCTTGCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	120162154	120168748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ENSMUSG00000093930.3_120162727_120168863_1	chr13	+	1723	7	ISM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	10745	755	10727	-755	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAATTCACGGGACACCT	NA	NA	NA	NA	NA	NA	NA	NA	120162726	120168863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ENSMUSG00000093930.3_120166916_120169618_1	chr13	+	1826	2	ISM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	14934	0	14916	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCTCTTTGAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	120166915	120169618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_120167048_120167924
ENSMUSG00000094002.4_27185223_27188928_1	chr12	-	547	2	NNC	ENSMUSG00000094002.4	novel	577	2	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTCAGAGACTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	27188928	27185222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_27185265_27188423
ENSMUSG00000094002.4_27185223_27188928_2	chr12	-	550	2	FSM	ENSMUSG00000094002.4	ENST00000431182.2	577	2	27	0	27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTCAGAGACTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	27188928	27185222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_27185262_27188417
ENSMUSG00000094103.3_55246377_55263482_1	chr12	+	3392	5	FSM	ENSMUSG00000094103.3	ENSMUST00000177978.3	3863	5	0	471	0	-471	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATCTTACTTTCCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	55246376	55263482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_55246572_55252464_55252639_55257516_55257584_55258966_55259065_55260624
ENSMUSG00000094103.3_55257516_55263953_1	chr12	+	3495	3	ISM	ENSMUSG00000094103.3	ENSMUST00000177978.3	3863	5	11139	0	11139	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCTGCAGAGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	55257515	55263953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55257584_55258966_55259065_55260624
ENSMUSG00000094365.2_30340426_30347247_1	chr7	-	1275	8	ISM	ENSMUSG00000036733.17	ENSMUST00000042726.14	1784	10	2495	0	2248	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	30347247	30340425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155
ENSMUSG00000094365.2_30340426_30349469_1	chr7	-	1224	8	NNC	ENSMUSG00000036733.17	novel	1195	8	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	30349469	30340425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_30340641_30343923_30344042_30344250_30344584_30345091_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ENSMUSG00000094365.2_30340426_30349469_2	chr7	-	1229	8	FSM	ENSMUSG00000036733.17	ENST00000589559.5	1195	8	26	-60	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	30349469	30340425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30340646_30343923_30344042_30344250_30344584_30345091_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ENSMUSG00000094365.2_30340426_30349469_3	chr7	-	1225	8	NNC	ENSMUSG00000036733.17	novel	1195	8	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1877	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	30349469	30340425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_30340646_30343923_30344042_30344250_30344580_30345091_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ENSMUSG00000094365.2_30340426_30349469_4	chr7	-	1220	8	NNC	ENSMUSG00000036733.17	novel	1195	8	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	30349469	30340425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_30340646_30343923_30344033_30344250_30344584_30345091_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ENSMUSG00000094365.2_30340426_30349469_5	chr7	-	1227	8	NNC	ENSMUSG00000036733.17	novel	1195	8	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	30349469	30340425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_30340646_30343923_30344042_30344250_30344584_30345093_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ENSMUSG00000094365.2_30340426_30359022_1	chr7	-	3174	17	ISM	ENSMUSG00000094365.2	ENSMUST00000146232.2	3821	25	5340	0	5340	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1725	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	30359022	30340425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362_30349609_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358091_30358277_30358409_30358487
ENSMUSG00000094365.2_30340565_30344387_1	chr7	-	531	4	ISM	ENSMUSG00000036733.17	ENST00000592202.5	1315	8	5108	79	5108	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGGAAAAGAAAAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	30344387	30340564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250
ENSMUSG00000094365.2_30340580_30359584_1	chr7	-	3086	18	ISM	ENSMUSG00000094365.2	ENSMUST00000146232.2	3821	25	4778	154	4778	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTCCGTAAGAAGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	30359584	30340579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362_30349609_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358091_30358277_30358409_30358487_30359023_30359518
ENSMUSG00000094365.2_30340592_30349071_1	chr7	-	277	4	ISM	ENSMUSG00000036733.17	ENST00000586618.5	648	5	424	165	424	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACCTGGATGTGGTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	30349071	30340591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30340646_30340732_30340836_30347183_30347241_30349008
ENSMUSG00000094365.2_30340602_30349071_1	chr7	-	1155	9	ISM	ENSMUSG00000036733.17	ENSMUST00000042726.14	1784	10	671	176	424	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGGACCGGAACCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	30349071	30340601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008
ENSMUSG00000094365.2_30340806_30361085_1	chr7	-	3066	19	ISM	ENSMUSG00000094365.2	ENSMUST00000146232.2	3821	25	3277	380	3277	-380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1065	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAAGGGCTATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	30361085	30340805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362_30349609_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358091_30358277_30358409_30358487_30359023_30359518_30359602_30359683_30359754_30361053
ENSMUSG00000094365.2_30340817_30344538_1	chr7	-	517	3	ISM	ENSMUSG00000036733.17	ENST00000592202.5	1315	8	4957	331	4957	-331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCGCACAGGCAAAACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	30344538	30340816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30340928_30343923_30344042_30344250
ENSMUSG00000094365.2_30340854_30349465_1	chr7	-	1166	9	ISM	ENSMUSG00000036733.17	ENSMUST00000042726.14	1784	10	277	428	30	-368	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCATCCTTCCTTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	30349465	30340853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ENSMUSG00000094365.2_30340866_30361136_1	chr7	-	3057	19	ISM	ENSMUSG00000094365.2	ENSMUST00000146232.2	3821	25	3226	440	3226	-440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCAGCCGCTTCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	30361136	30340865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362_30349609_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358091_30358277_30358409_30358487_30359023_30359518_30359602_30359683_30359754_30361053
ENSMUSG00000094365.2_30343997_30361355_1	chr7	-	3061	19	ISM	ENSMUSG00000094365.2	ENSMUST00000146232.2	3821	25	3007	3571	3007	-3571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGAAACGCTGCATTCG	NA	NA	NA	NA	NA	NA	NA	NA	30361355	30343996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362_30349609_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358091_30358277_30358409_30358487_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293
ENSMUSG00000094365.2_30344249_30347247_1	chr7	-	582	3	ISM	ENSMUSG00000036733.17	ENST00000592202.5	1315	8	2248	3763	2248	-3763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGGGAATTGCGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	30347247	30344248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30344584_30345091_30345247_30347155
ENSMUSG00000094365.2_30344437_30349380_1	chr7	-	541	5	ISM	ENSMUSG00000036733.17	ENST00000592202.5	1315	8	115	3951	115	-3951	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCATTGGCCCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	30349380	30344436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30344584_30345091_30345247_30347155_30347241_30349008_30349145_30349362
ENSMUSG00000094365.2_30344500_30349421_1	chr7	-	519	5	ISM	ENSMUSG00000036733.17	ENST00000592202.5	1315	8	74	4014	74	-4014	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGCTGGAGGAAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	30349421	30344499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_30344584_30345091_30345247_30347155_30347241_30349008_30349145_30349362
ENSMUSG00000094410.9_133548087_133550815_1	chr1	-	1615	3	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	38241	409	38241	-409	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCTGTCATGTTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	133550815	133548086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_133549540_133549854_133549923_133550721
ENSMUSG00000094410.9_133548310_133552360_1	chr1	-	1605	4	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	36696	632	36696	-632	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGATACCTCCAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	133552360	133548309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220
ENSMUSG00000094410.9_133548541_133553658_1	chr1	-	1635	5	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	35398	863	35398	-863	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGAAAATTGTCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	133553658	133548540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585
ENSMUSG00000094410.9_133548744_133554696_1	chr1	-	1634	6	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	34360	1066	34360	-1066	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATACGGACCTAACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	133554696	133548743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504
ENSMUSG00000094410.9_133548907_133554865_1	chr1	-	1640	6	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	34191	1229	34191	-1229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATTTTATCAGAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	133554865	133548906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504
ENSMUSG00000094410.9_133548972_133554970_1	chr1	-	1680	6	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	34086	1294	34086	-1294	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGGTCCTCGAGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	133554970	133548971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504
ENSMUSG00000094410.9_133549294_133565174_1	chr1	-	1643	9	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	23882	1616	23882	-1616	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGACAGCTGAAACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	133565174	133549293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086
ENSMUSG00000094410.9_133550805_133566908_1	chr1	-	1667	11	ISM	ENSMUSG00000102976.7	ENST00000367212.7	3006	20	22162	1561	22148	-1550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTCTGCCGTCATCGCA	NA	NA	NA	NA	NA	NA	NA	NA	133566908	133550804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133557231_133557301_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777
ENSMUSG00000094410.9_133554543_133575232_1	chr1	-	1610	11	ISM	ENSMUSG00000102976.7	ENST00000367211.6	2985	19	13838	5288	13824	-5288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACAAAGAGGCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	133575232	133554542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_133555009_133557231_133557301_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073
ENSMUSG00000094439.2_139361073_139371544_1	chr4	+	1351	12	ISM	ENSMUSG00000028737.16	ENST00000375341.8	1629	14	40	4041	40	-4041	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGCCTCAGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	139361072	139371544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422
ENSMUSG00000094439.2_139361262_139372321_1	chr4	+	1282	12	ISM	ENSMUSG00000028737.16	ENSMUST00000039818.10	3382	15	11085	4680	229	-3264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGCTGCTGGCAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	139361261	139372321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289
ENSMUSG00000094441.3_33459128_33463108_1	chr17	-	2982	3	ISM	ENSMUSG00000094441.3	ENSMUST00000008830.10	3544	4	11011	436	11011	-436	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGAGCTCATATTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	33463108	33459127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_33461925_33462686_33462745_33462981
ENSMUSG00000094441.3_33459268_33474119_1	chr17	-	2968	4	FSM	ENSMUSG00000094441.3	ENSMUST00000008830.10	3544	4	0	576	0	-576	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATATTTGCCTATTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	33474119	33459267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_33461925_33462686_33462745_33462981_33463109_33473993
ENSMUSG00000094475.8_175432206_175444226_1	chr2	+	1337	4	NNC	ENSMUSG00000094475.8	novel	1497	4	NA	NA	-3565	1032	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTAACATTAGATTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	175432205	175444226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_175432264_175435718_175435774_175442797_175442925_175443129
ENSMUSG00000094500.3_34229007_34237680_1	chr8	-	636	3	NNC	ENSMUSG00000094500.3	novel	674	2	NA	NA	102	3113	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGTGGTAGTGGTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	34237680	34229006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_34229084_34232132_34232635_34237623
ENSMUSG00000094500.3_34229007_34237680_2	chr8	-	650	3	NNC	ENSMUSG00000094500.3	novel	674	2	NA	NA	102	3113	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGTGGTAGTGGTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	34237680	34229006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_34229075_34232109_34232637_34237625
ENSMUSG00000094500.3_34232140_34237798_2	chr8	-	670	2	FSM	ENSMUSG00000094500.3	ENST00000517349.2	674	2	-16	20	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACCAGTCTACTTAATAC	NA	NA	NA	NA	NA	NA	NA	NA	34237798	34232139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_34232635_34237623
ENSMUSG00000094840.6_137244972_137251535_1	chr5	-	1439	8	FSM	ENSMUSG00000094840.6	ENST00000483366.5	1439	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCGACAGGTACGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	137251535	137244971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_137245053_137245828_137245992_137246539_137246606_137246842_137246992_137248719_137248779_137248885_137249002_137250614_137250804_137250919
ENSMUSG00000094840.6_137244972_137251535_2	chr5	-	1433	8	NNC	ENSMUSG00000094840.6	novel	1439	8	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1827	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCGACAGGTACGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	137251535	137244971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_137245053_137245828_137245992_137246539_137246606_137246842_137246992_137248719_137248779_137248885_137248996_137250614_137250804_137250919
ENSMUSG00000094840.6_137244972_137251535_3	chr5	-	1433	8	NNC	ENSMUSG00000094840.6	novel	1439	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCGACAGGTACGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	137251535	137244971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_137245053_137245828_137245992_137246539_137246606_137246842_137246992_137248719_137248773_137248885_137249002_137250614_137250804_137250919
ENSMUSG00000094840.6_137245142_137246904_1	chr5	-	464	4	ISM	ENSMUSG00000094840.6	ENSMUST00000179412.2	1881	7	-52	1872	-52	-170	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCAGGTGAGCTGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	137246904	137245141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137245315_137245828_137245992_137246539_137246606_137246842
ENSMUSG00000094840.6_137245196_137246954_1	chr5	-	460	4	ISM	ENSMUSG00000094840.6	ENSMUST00000179412.2	1881	7	-102	1926	-102	-224	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAAGTGTCTGGGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	137246954	137245195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137245315_137245828_137245992_137246539_137246606_137246842
ENSMUSG00000094840.6_137245283_137248765_1	chr5	-	456	5	ISM	ENSMUSG00000094840.6	ENST00000379458.9	1619	9	2770	311	-1913	-311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACGCTGTGAGTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	137248765	137245282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137245315_137245828_137245992_137246539_137246606_137246842_137246992_137248719
ENSMUSG00000094870.9_120227328_120251727_1	chr13	-	351	3	FSM	ENSMUSG00000094870.9	ENST00000509931.5	964	3	96	517	96	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAAAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	120251727	120227327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_120227594_120250455_120250498_120251684
ENSMUSG00000094932.8_175529754_175541776_1	chr2	+	1331	4	NNC	ENSMUSG00000094932.8	novel	1497	4	NA	NA	-3576	1023	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATATTATGTTAACATT	NA	NA	NA	NA	NA	NA	NA	NA	175529753	175541776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_175529815_175533277_175533333_175540356_175540484_175540688
ENSMUSG00000094936.9_4834850_4837782_1	chr19	-	1140	2	ISM	ENSMUSG00000096370.9	ENSMUST00000179909.8	1435	3	23754	-330	23754	330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAACACTCAGTAAACATA	NA	NA	NA	NA	NA	NA	NA	NA	4837782	4834849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4835596_4837388
ENSMUSG00000094936.9_4834934_4837872_1	chr19	-	1146	2	ISM	ENSMUSG00000096370.9	ENSMUST00000179909.8	1435	3	23664	-246	23664	246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGAAGCCAGTTAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	4837872	4834933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4835596_4837388
ENSMUSG00000095134.3_90771733_90774624_1	chrY	+	578	3	ISM	ENSMUSG00000095134.3	ENSMUST00000167967.4	1248	7	7407	130	7407	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCACACCTTCCACGCGG	NA	NA	NA	NA	NA	NA	NA	NA	90771732	90774624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrY_+_90771884_90773347_90773556_90774405
ENSMUSG00000095134.3_90771783_90774754_1	chrY	+	658	3	ISM	ENSMUSG00000095134.3	ENSMUST00000167967.4	1248	7	7457	0	7457	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACCCGGCCCCACAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	90771782	90774754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrY_+_90771884_90773347_90773556_90774405
ENSMUSG00000095134.3_90771827_90774754_1	chrY	+	614	3	ISM	ENSMUSG00000095134.3	ENSMUST00000167967.4	1248	7	7501	0	7501	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACCCGGCCCCACAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	90771826	90774754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrY_+_90771884_90773347_90773556_90774405
ENSMUSG00000095186.2_3023687_3024670_1	chr9	+	457	3	NNC	ENSMUSG00000095186.2	novel	681	5	NA	NA	140	-548	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACGTTTTTCACTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	3023686	3024670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_3023945_3024411_3024567_3024626
ENSMUSG00000095186.2_3023791_3025218_1	chr9	+	434	3	NIC	ENSMUSG00000095186.2	novel	681	5	NA	NA	244	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTCAAAGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3023790	3025218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_3023945_3024411_3024567_3025093
ENSMUSG00000095463.9_69585036_69603188_1	chr14	+	1818	12	FSM	ENSMUSG00000095463.9	ENST00000417069.6	1916	12	98	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACACTGCGTCAGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	69585035	69603188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594575_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
ENSMUSG00000095463.9_69585036_69603188_2	chr14	+	1814	12	NNC	ENSMUSG00000095463.9	novel	1916	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACACTGCGTCAGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	69585035	69603188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594575_69596274_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
ENSMUSG00000095463.9_69586520_69603188_1	chr14	+	1805	11	NNC	ENSMUSG00000095463.9	novel	1916	12	NA	NA	1484	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACACTGCGTCAGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	69586519	69603188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594575_69596270_69596438_69599087_69599413_69601016_69601103_69601778_69601934_69602968
ENSMUSG00000095547.2_3020155_3021110_1	chr9	+	489	2	NIC	ENSMUSG00000095547.2	novel	681	5	NA	NA	0	219	intron_retention	TRUE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTTTTCTTGCCATAT	NA	NA	NA	NA	NA	NA	NA	NA	3020154	3021110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_3020319_3020785
ENSMUSG00000095547.2_3020301_3021487_1	chr9	+	426	3	NIC	ENSMUSG00000095547.2	novel	681	5	NA	NA	146	-106	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	882	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTACAGTGTGCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	3020300	3021487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_3020319_3020785_3021175_3021468
ENSMUSG00000095547.2_3020457_3021110_1	chr9	+	420	2	NNC	ENSMUSG00000095547.2	novel	675	5	NA	NA	302	219	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	586	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTTTTCTTGCCATAT	NA	NA	NA	NA	NA	NA	NA	NA	3020456	3021110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_3020552_3020785
ENSMUSG00000095547.2_3020457_3021174_1	chr9	+	483	2	NNC	ENSMUSG00000095547.2	novel	675	5	NA	NA	302	283	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCCTTGCCATATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	3020456	3021174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_3020560_3020794
ENSMUSG00000095547.2_3020733_3021284_1	chr9	+	492	2	NNC	ENSMUSG00000095547.2	novel	681	5	NA	NA	578	-309	intron_retention	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGTGATTTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	3020732	3021284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_3021175_3021234
ENSMUSG00000095547.2_3020863_3021593_1	chr9	+	437	2	NIC	ENSMUSG00000095547.2	novel	681	5	NA	NA	708	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1509	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3020862	3021593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_3021175_3021468
ENSMUSG00000095567.9_156320670_156329699_1	chr4	+	1663	14	ISM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	203	2374	203	-2374	internal_fragment	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATGCACAACATATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	156320669	156329699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623
ENSMUSG00000095567.9_156321835_156329951_1	chr4	+	1648	14	ISM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	1368	2122	1368	-2122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGAGGGACCGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	156321834	156329951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886
ENSMUSG00000095567.9_156322124_156331172_1	chr4	+	1665	15	ISM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	1657	901	1657	-901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATCAGGAAGAAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	156322123	156331172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133
ENSMUSG00000095567.9_156325099_156331925_1	chr4	+	1660	11	ISM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	4632	148	4632	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTATCCTGGAACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	156325098	156331925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_+_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ENSMUSG00000095595.3_55171367_55188402_1	chr12	+	3317	5	NNC	ENSMUSG00000095595.3	novel	3922	5	NA	NA	113	-487	intron_retention	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGGCTAACTACAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	55171366	55188402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_55171508_55177405_55177575_55182452_55182520_55183902_55184001_55185560
ENSMUSG00000095595.3_55171435_55188469_1	chr12	+	3321	5	FSM	ENSMUSG00000095595.3	ENSMUST00000177768.3	3922	5	181	420	181	-420	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTCATAAAAAACCAATAG	NA	NA	NA	NA	NA	NA	NA	NA	55171434	55188469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_55171508_55177400_55177575_55182452_55182520_55183902_55184001_55185560
ENSMUSG00000095595.3_55171438_55188480_1	chr12	+	3329	5	FSM	ENSMUSG00000095595.3	ENSMUST00000177768.3	3922	5	184	409	184	-409	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATAGTTGGTCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	55171437	55188480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_55171508_55177400_55177575_55182452_55182520_55183902_55184001_55185560
ENSMUSG00000095595.3_55177399_55188583_1	chr12	+	3364	4	ISM	ENSMUSG00000095595.3	ENSMUST00000177768.3	3922	5	6145	306	-5053	-306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAACGTTTCTAAGGATTC	NA	NA	NA	NA	NA	NA	NA	NA	55177398	55188583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55177575_55182452_55182520_55183902_55184001_55185560
ENSMUSG00000095595.3_55182452_55186408_1	chr12	+	792	4	FSM	ENSMUSG00000095595.3	ENST00000280987.9	792	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATGGGAAAGATTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	55182451	55186408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_55182520_55183902_55184001_55185560_55185941_55186162
ENSMUSG00000095595.3_55182452_55188714_1	chr12	+	3320	3	ISM	ENSMUSG00000095595.3	ENST00000280987.9	792	4	0	-2306	0	-175	intron_retention	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCACCCAACTGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	55182451	55188714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55182520_55183902_55184001_55185560
ENSMUSG00000095595.3_55183897_55188889_1	chr12	+	3433	2	ISM	ENSMUSG00000095595.3	ENST00000280987.9	792	4	1445	-2481	1445	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCTGCAGAGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	55183896	55188889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55184001_55185560
ENSMUSG00000095677.3_6916337_6920751_1	chr17	-	644	4	ISM	ENSMUSG00000095677.3	ENSMUST00000179554.3	771	5	2548	0	2548	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	6920751	6916336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_6916737_6917085_6917164_6917501_6917626_6920709
ENSMUSG00000095677.3_6916486_6923217_2	chr17	-	540	5	FSM	ENSMUSG00000095677.3	ENSMUST00000179554.3	771	5	82	149	82	-149	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGTACCACTTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	6923217	6916485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_6916737_6917085_6917164_6917501_6917626_6920709_6920752_6923172
ENSMUSG00000095687.3_8346908_8366797_3	chr17	-	1661	9	FSM	ENSMUSG00000095687.3	ENSMUST00000097420.7	1793	9	132	0	132	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGCTAGTGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	8366797	8346907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
ENSMUSG00000095687.3_8346908_8366797_4	chr17	-	1655	9	NNC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	132	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGCTAGTGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	8366797	8346907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_8347713_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
ENSMUSG00000095687.3_8346908_8366797_5	chr17	-	1655	9	NNC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	132	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGCTAGTGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	8366797	8346907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364429_8366425
ENSMUSG00000095687.3_8346908_8366929_1	chr17	-	1789	9	NNC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGCTAGTGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	8366929	8346907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360477_8361344_8361403_8364373_8364435_8366425
ENSMUSG00000095687.3_8346908_8366929_3	chr17	-	1786	9	NNC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGCTAGTGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	8366929	8346907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361356_8361403_8364373_8364435_8366425
ENSMUSG00000095891.8_3025587_3026093_1	chr9	+	447	2	NNC	ENSMUSG00000095891.8	novel	684	3	NA	NA	170	-294	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTTTCAATTTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	3025586	3026093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_3025969_3026028
ENSMUSG00000095891.8_3025691_3026387_1	chr9	+	403	2	NIC	ENSMUSG00000095891.8	novel	684	3	NA	NA	274	0	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3025690	3026387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_3025969_3026262
ENSMUSG00000095891.8_3032371_3033289_1	chr9	+	392	2	NIC	ENSMUSG00000095891.8	novel	681	4	NA	NA	286	0	intron_retention	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTCAAAGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3032370	3033289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_3032638_3033164
ENSMUSG00000096054.4_5293402_5303926_1	chr10	-	1502	10	ISM	ENSMUSG00000096054.4	ENST00000413186.6	4504	30	102944	4445	102944	-4445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCCTGGAGCAGAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	5303926	5293401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5293523_5294794_5294963_5296820_5296986_5297821_5297931_5298540_5298750_5298928_5299088_5299256_5299392_5300864_5301030_5302051_5302211_5303814
ENSMUSG00000096054.4_5294870_5306745_1	chr10	-	1437	10	ISM	ENSMUSG00000096054.4	ENST00000413186.6	4504	30	100125	5913	100125	-5913	internal_fragment	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGGAAGAGGCTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	5306745	5294869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5294963_5296820_5296986_5297821_5297931_5298540_5298750_5298928_5299088_5299256_5299392_5300864_5301030_5302051_5302211_5303814_5303989_5306676
ENSMUSG00000096054.4_5296861_5308454_1	chr10	-	1500	10	ISM	ENSMUSG00000096054.4	ENST00000413186.6	4504	30	98416	7904	98416	-7904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGCTCTTTCAAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	5308454	5296860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5296986_5297821_5297931_5298540_5298750_5298928_5299088_5299256_5299392_5300864_5301030_5302051_5302211_5303814_5303989_5306676_5306821_5308333
ENSMUSG00000096054.4_5308304_5375762_1	chr10	-	1970	14	ISM	ENSMUSG00000096054.4	ENST00000535896.7	2233	18	31108	0	31108	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACACACTGTAAAAGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5375762	5308303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5308487_5308940_5309106_5310673_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5362862_5362911_5366789_5366900_5370379_5370577_5374203_5374383_5375667
ENSMUSG00000096054.4_5308433_5386784_1	chr10	-	1885	15	ISM	ENSMUSG00000096054.4	ENST00000413186.6	4504	30	20086	19476	20086	-129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCCTCTTTGGTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	5386784	5308432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5308487_5308940_5309106_5310673_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5362862_5362911_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5386738
ENSMUSG00000096054.4_5309034_5406838_1	chr10	-	1904	16	ISM	ENSMUSG00000096054.4	ENST00000413186.6	4504	30	32	20077	32	-730	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTGTGATGAGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	5406838	5309033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5309106_5310673_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5362862_5362911_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5386738_5386823_5393139_5393236_5406806
ENSMUSG00000096054.4_5310709_5393161_1	chr10	-	1712	15	ISM	ENSMUSG00000096054.4	ENST00000535896.7	2233	18	13709	2405	13709	-2405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATGCTAAGCCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	5393161	5310708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5362862_5362911_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5376254_5376276_5386738_5386823_5393139
ENSMUSG00000096054.4_5310709_5393206_1	chr10	-	1757	15	ISM	ENSMUSG00000096054.4	ENST00000535896.7	2233	18	13664	2405	13664	-2405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATGCTAAGCCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	5393206	5310708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5362862_5362911_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5376254_5376276_5386738_5386823_5393139
ENSMUSG00000096054.4_5310709_5492019_1	chr10	-	1899	16	ISM	ENSMUSG00000096054.4	ENST00000466159.6	2282	18	0	2405	0	-2405	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATGCTAAGCCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	5492019	5310708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5362862_5362911_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5386738_5386823_5393139_5393236_5406806_5406869_5491947
ENSMUSG00000096054.4_5329043_5492019_3	chr10	-	1497	14	FSM	ENSMUSG00000096054.4	ENST00000610489.2	1497	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCAAGGCCAGCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	5492019	5329042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_5329167_5353840_5354006_5355424_5355563_5359763_5359872_5362862_5362911_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5376254_5376276_5386738_5386823_5393139_5393236_5406806_5406869_5491947
ENSMUSG00000096199.3_4284027_4287656_1	chr12	+	1546	2	FSM	ENSMUSG00000096199.3	ENSMUST00000179139.3	3840	2	0	2294	0	-2294	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCATTAACATCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	4284026	4287656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_4284279_4286362
ENSMUSG00000096199.3_4284212_4287762_1	chr12	+	1467	2	FSM	ENSMUSG00000096199.3	ENSMUST00000179139.3	3840	2	185	2188	185	-2188	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCATTCAGCTATGATGA	NA	NA	NA	NA	NA	NA	NA	NA	4284211	4287762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_4284279_4286362
ENSMUSG00000096255.3_6697511_6703553_1	chr17	+	629	5	FSM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	0	142	0	-142	multi-exon	TRUE	canonical	NA	NA	NA	NA	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTTGTCTTAACTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	6697510	6703553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_6697638_6699278_6699321_6702406_6702531_6702868_6702947_6703295
ENSMUSG00000096255.3_6697511_6703553_2	chr17	+	622	5	NNC	ENSMUSG00000096255.3	novel	771	5	NA	NA	0	-142	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTTGTCTTAACTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	6697510	6703553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_6697638_6699278_6699321_6702413_6702531_6702868_6702947_6703295
ENSMUSG00000096255.3_6699277_6703695_1	chr17	+	646	4	ISM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	1766	0	1766	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	6699276	6703695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_6699321_6702406_6702531_6702868_6702947_6703295
ENSMUSG00000096351.3_156332188_156333108_1	chr4	-	504	4	ISM	ENSMUSG00000096351.3	ENSMUST00000217934.2	2413	10	6710	555	6710	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGATCCGGCAGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	156333108	156332187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_156332427_156332544_156332656_156332793_156332916_156333076
ENSMUSG00000096351.3_156332193_156333204_1	chr4	-	595	4	ISM	ENSMUSG00000096351.3	ENSMUST00000217934.2	2413	10	6614	560	6614	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCCAATGATCCGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	156333204	156332192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_156332427_156332544_156332656_156332793_156332916_156333076
ENSMUSG00000096351.3_156332250_156333270_1	chr4	-	604	4	ISM	ENSMUSG00000096351.3	ENSMUST00000217934.2	2413	10	6548	617	6548	-62	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGAATGGGTCAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	156333270	156332249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_156332427_156332544_156332656_156332793_156332916_156333076
ENSMUSG00000096351.3_156332543_156333403_1	chr4	-	562	3	ISM	ENSMUSG00000096351.3	ENSMUST00000217934.2	2413	10	6415	910	6415	-355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGTCCAGTGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	156333403	156332542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_156332656_156332793_156332916_156333076
ENSMUSG00000096351.3_156332591_156333456_1	chr4	-	567	3	ISM	ENSMUSG00000096351.3	ENSMUST00000217934.2	2413	10	6362	958	6362	-403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATGGGACTGAAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	156333456	156332590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_156332656_156332793_156332916_156333076
ENSMUSG00000096351.3_156332613_156333537_1	chr4	-	626	3	ISM	ENSMUSG00000096351.3	ENSMUST00000217934.2	2413	10	6281	980	6281	-425	internal_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGAAGAGCACCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	156333537	156332612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_156332656_156332793_156332916_156333076
ENSMUSG00000096351.3_156332867_156333683_1	chr4	-	584	3	ISM	ENSMUSG00000096351.3	ENSMUST00000217934.2	2413	10	6135	1234	6135	-679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAACAAGTGGACTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	156333683	156332866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_156332916_156333076_156333580_156333651
ENSMUSG00000096351.3_156333153_156333917_1	chr4	-	582	3	ISM	ENSMUSG00000096351.3	ENSMUST00000217934.2	2413	10	5901	1520	5901	-965	internal_fragment	TRUE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCAGGGTCCACACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	156333917	156333152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_156333580_156333651_156333731_156333841
ENSMUSG00000096351.3_156333436_156336708_1	chr4	-	662	6	ISM	ENSMUSG00000096351.3	ENSMUST00000217934.2	2413	10	3110	1803	3110	-1248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCACCACTACTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	156336708	156333435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_156333580_156333651_156333731_156333841_156333958_156334794_156334958_156336402_156336538_156336683
ENSMUSG00000096351.3_156333840_156339646_1	chr4	-	634	5	ISM	ENSMUSG00000096351.3	ENSMUST00000217934.2	2413	10	172	2207	172	-1652	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGTCGGGTATGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	156339646	156333839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_156333958_156334794_156334958_156336402_156336538_156336683_156336771_156339515
ENSMUSG00000096370.9_4835335_4842651_1	chr19	-	1169	3	ISM	ENSMUSG00000094936.9	ENSMUST00000179189.9	1411	4	1237	0	1228	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCCTCCCTTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4842651	4835334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4835596_4837388_4838071_4842425
ENSMUSG00000096370.9_4835335_4842736_1	chr19	-	1254	3	ISM	ENSMUSG00000094936.9	ENSMUST00000179189.9	1411	4	1152	0	1143	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCCTCCCTTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4842736	4835334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4835596_4837388_4838071_4842425
ENSMUSG00000096370.9_4835465_4842793_1	chr19	-	1181	3	ISM	ENSMUSG00000094936.9	ENSMUST00000179189.9	1411	4	1095	130	1086	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAAGTTCTTTCTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	4842793	4835464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4835596_4837388_4838071_4842425
ENSMUSG00000096370.9_4837517_4843879_1	chr19	-	1157	3	ISM	ENSMUSG00000094936.9	ENSMUST00000180248.8	2610	4	50	3196	0	-2182	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTACGGGCATGACAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	4843879	4837516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_4838071_4842425_4842849_4843699
ENSMUSG00000096385.8_3003346_3004245_1	chr9	+	493	2	NNC	ENSMUSG00000096385.8	novel	684	5	NA	NA	0	-949	intron_retention	TRUE	canonical	NA	NA	NA	NA	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTTTCTCGCCATATT	NA	NA	NA	NA	NA	NA	NA	NA	3003345	3004245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_3003698_3004104
ENSMUSG00000096385.8_3003580_3005194_1	chr9	+	447	3	NIC	ENSMUSG00000096385.8	novel	684	5	NA	NA	0	0	intron_retention	TRUE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTCCATGTCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	3003579	3005194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_3003698_3004571_3004776_3005069
ENSMUSG00000096385.8_3004457_3005194_1	chr9	+	444	2	NIC	ENSMUSG00000096385.8	novel	672	4	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTCCATGTCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	3004456	3005194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_3004776_3005069
ENSMUSG00000096519.2_3013443_3014344_1	chr9	+	426	2	NNC	ENSMUSG00000096519.2	novel	669	4	NA	NA	303	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3013442	3014344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_3013538_3014013
ENSMUSG00000096519.2_3013443_3014344_4	chr9	+	435	2	ISM	ENSMUSG00000096519.2	ENSMUST00000143083.3	669	4	303	0	303	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3013442	3014344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_3013538_3014004
ENSMUSG00000096718.3_81740365_81740986_1	chr10	-	449	2	FSM	ENSMUSG00000096718.3	ENST00000351773.7	762	2	313	0	313	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGCAAGCAATGTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	81740986	81740364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_81740753_81740925
ENSMUSG00000096727.4_34401156_34402718_1	chr17	-	442	3	ISM	ENSMUSG00000096727.4	ENST00000374859.3	702	6	3566	0	3566	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCAGAAGGCCGGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	34402718	34401155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34401326_34402062_34402205_34402588
ENSMUSG00000096727.4_34401209_34403269_1	chr17	-	403	4	ISM	ENSMUSG00000096727.4	ENST00000374859.3	702	6	3015	53	3015	-53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATGAGTGACTGATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	34403269	34401208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34401326_34402062_34402205_34402588_34402719_34403255
ENSMUSG00000096727.4_34401274_34403314_1	chr17	-	383	4	ISM	ENSMUSG00000096727.4	ENST00000374859.3	702	6	2970	118	2970	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACCATCACAGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	34403314	34401273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34401326_34402062_34402205_34402588_34402719_34403255
ENSMUSG00000096740.9_8867367_8868247_1	chr19	+	565	2	NNC	ENSMUSG00000071653.10	novel	806	4	NA	NA	1150	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAACATTTGCCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	8867366	8868247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_8867465_8867780
ENSMUSG00000096740.9_8867367_8868247_2	chr19	+	571	2	ISM	ENSMUSG00000071653.10	ENSMUST00000096251.10	806	4	1150	-2	1150	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAACATTTGCCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	8867366	8868247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_8867465_8867774
ENSMUSG00000096753.8_103281218_103282834_1	chr12	+	920	2	FSM	ENSMUSG00000096753.8	ENST00000556222.1	1151	2	90	141	0	-141	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCGCCTGTGGATCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	103281217	103282834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_103281334_103282030
ENSMUSG00000096764.2_112097164_112177287_1	chr2	+	1651	12	ISM	ENSMUSG00000027130.16	ENSMUST00000110987.9	3722	19	77	9087	0	-9087	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCCATCCCCGTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	112097163	112177287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112097438_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243
ENSMUSG00000096764.2_112097164_112177346_1	chr2	+	1710	12	ISM	ENSMUSG00000027130.16	ENSMUST00000110987.9	3722	19	77	9028	0	-9028	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGAGCCTCACAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	112097163	112177346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112097438_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243
ENSMUSG00000096764.2_112097361_112177717_1	chr2	+	1641	13	ISM	ENSMUSG00000027130.16	ENSMUST00000110987.9	3722	19	274	8657	197	-8657	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCATAGCAGAGCTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	112097360	112177717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112097438_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661
ENSMUSG00000096764.2_112164783_112181681_1	chr2	+	1620	13	ISM	ENSMUSG00000027130.16	ENSMUST00000053666.8	6060	25	49861	11820	18197	-4693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGCCATTGTAGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	112164782	112181681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623
ENSMUSG00000096768.9_90796180_90833671_1	chrY	+	1279	3	NNC	ENSMUSG00000096768.9	novel	1272	3	NA	NA	0	5937	intron_retention	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	90796179	90833671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrY_+_90797249_90804593_90804687_90833554
ENSMUSG00000096768.9_90803841_90833652_1	chrY	+	1207	2	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	2121	5918	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGCAGTTGAAATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	90803840	90833652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrY_+_90804950_90833554
ENSMUSG00000096965.8_5849766_5853516_1	chr17	+	1169	3	NNC	ENSMUSG00000096965.8	novel	1174	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTCCAGACCTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	5849765	5853516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_5850269_5851473_5851617_5852993
ENSMUSG00000097195.11_88403314_88405289_1	chr9	-	1141	5	FSM	ENSMUSG00000097195.11	ENSMUST00000239369.2	1678	5	326	211	-262	-195	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTATGTAAATGGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	88405289	88403313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536
ENSMUSG00000097195.11_88403717_88405615_1	chr9	-	1265	4	ISM	ENSMUSG00000097195.11	ENSMUST00000239369.2	1678	5	0	614	0	-598	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGGAGTGCATGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	88405615	88403716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_88403770_88403970_88404029_88404359_88404435_88404536
ENSMUSG00000097216.4_57873924_57875348_1	chr5	-	644	2	FSM	ENSMUSG00000097216.4	ENST00000660555.1	2300	2	1646	10	-86	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGTGCCTCGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	57875348	57873923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_57874407_57875187
ENSMUSG00000097248.10_88187097_88252072_1	chr8	+	1017	7	FSM	ENSMUSG00000097248.10	ENSMUST00000210935.2	1125	7	0	108	0	-108	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATACCCACCCTGCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	88187096	88252072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_88187333_88221484_88221786_88222337_88222490_88240436_88240525_88248363_88248442_88250923_88251056_88252042
ENSMUSG00000097248.10_88187230_88252178_1	chr8	+	990	7	FSM	ENSMUSG00000097248.10	ENSMUST00000210935.2	1125	7	133	2	133	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGAGTGTGTCCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	88187229	88252178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_88187333_88221484_88221786_88222337_88222490_88240436_88240525_88248363_88248442_88250923_88251056_88252042
ENSMUSG00000097248.10_88187284_88252178_1	chr8	+	936	7	FSM	ENSMUSG00000097248.10	ENSMUST00000210935.2	1125	7	187	2	187	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGAGTGTGTCCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	88187283	88252178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_88187333_88221484_88221786_88222337_88222490_88240436_88240525_88248363_88248442_88250923_88251056_88252042
ENSMUSG00000097277.8_81178525_81181242_1	chr7	+	629	3	ISM	ENSMUSG00000097277.8	ENSMUST00000180879.8	725	4	5206	0	-15	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAATTTTTTGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	81178524	81181242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_81178689_81179094_81179276_81180958
ENSMUSG00000097327.8_21988949_22024995_1	chr10	-	1907	2	FSM	ENSMUSG00000097327.8	ENSMUST00000179054.8	2081	2	174	0	174	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAAAAATGCTTACCA	NA	NA	NA	NA	NA	NA	NA	NA	22024995	21988948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_21990248_22024387
ENSMUSG00000097327.8_21988949_22025052_1	chr10	-	1964	2	FSM	ENSMUSG00000097327.8	ENSMUST00000179054.8	2081	2	117	0	117	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAAAAATGCTTACCA	NA	NA	NA	NA	NA	NA	NA	NA	22025052	21988948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_21990248_22024387
ENSMUSG00000097328.8_69577076_69578182_1	chr11	-	947	2	ISM	ENSMUSG00000097328.8	ENSMUST00000181810.8	1435	7	8493	0	8493	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAGGTACCAGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69578182	69577075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_69577918_69578077
ENSMUSG00000097328.8_69577380_69586535_1	chr11	-	991	7	FSM	ENSMUSG00000097328.8	ENSMUST00000181810.8	1435	7	140	304	140	-304	multi-exon	TRUE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACCAGGCACTGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	69586535	69577379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69577918_69578077_69578203_69584331_69584368_69584446_69584501_69585575_69585652_69586219_69586268_69586421
ENSMUSG00000097333.8_67664350_67668819_1	chr13	-	1957	2	ISM	ENSMUSG00000097333.8	ENSMUST00000181767.8	2656	4	5477	450	5446	-450	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTCTGTTGAGCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	67668819	67664349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_67666232_67668744
ENSMUSG00000097333.8_67664567_67674240_1	chr13	-	1933	4	FSM	ENSMUSG00000097333.8	ENSMUST00000181767.8	2656	4	56	667	25	-667	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGAAGTATGGGACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	67674240	67664566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_67666232_67668744_67668841_67669311_67669439_67674195
ENSMUSG00000097397.3_4753027_4756853_1	chr16	-	1142	2	ISM	ENSMUSG00000097397.3	ENSMUST00000181498.3	1694	3	644	114	644	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTGGAACTCAGGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	4756853	4753026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_4754047_4756731
ENSMUSG00000097397.3_4753312_4757341_1	chr16	-	1139	3	FSM	ENSMUSG00000097397.3	ENSMUST00000181498.3	1694	3	156	399	156	-399	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	4757341	4753311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_4754047_4756731_4757029_4757234
ENSMUSG00000097487.8_101309638_101315058_1	chr11	-	763	6	ISM	ENSMUSG00000097487.8	ENSMUST00000107252.9	853	7	437	0	437	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCTTCCCTTCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	101315058	101309637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101310013_101310500_101310555_101312690_101312781_101314605_101314705_101314802_101314870_101314980
ENSMUSG00000097487.8_101309789_101315551_1	chr11	-	704	6	FSM	ENSMUSG00000097487.8	ENSMUST00000103102.10	1463	6	608	151	-5	-151	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGGGTGGGACGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	101315551	101309788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101310013_101312690_101312781_101314605_101314705_101314802_101314870_101314980_101315095_101315441
ENSMUSG00000097487.8_101309818_101315495_1	chr11	-	673	7	FSM	ENSMUSG00000097487.8	ENSMUST00000107252.9	853	7	0	180	0	-180	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGCCTGCCTGAGCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	101315495	101309817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101310013_101310500_101310555_101312690_101312781_101314605_101314705_101314802_101314870_101314980_101315095_101315441
ENSMUSG00000097487.8_101309949_101315742_1	chr11	-	735	6	FSM	ENSMUSG00000097487.8	ENSMUST00000103102.10	1463	6	417	311	-196	-311	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCATGCTGAAAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	101315742	101309948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101310013_101312690_101312781_101314605_101314705_101314802_101314870_101314980_101315095_101315441
ENSMUSG00000097487.8_101312658_101315495_1	chr11	-	343	4	FSM	ENSMUSG00000097487.8	ENST00000409446.8	361	4	51	-33	0	33	multi-exon	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGCGTCTGACTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	101315495	101312657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101312781_101314605_101314705_101314802_101314870_101315441
ENSMUSG00000097487.8_101312658_101315495_2	chr11	-	337	4	NNC	ENSMUSG00000097487.8	novel	748	6	NA	NA	0	33	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGCGTCTGACTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	101315495	101312657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_101312781_101314605_101314705_101314802_101314864_101315441
ENSMUSG00000097487.8_101314807_101315991_1	chr11	-	727	3	ISM	ENSMUSG00000097487.8	ENSMUST00000093933.11	748	6	-496	3110	168	-2116	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGTGAGGGCAGGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	101315991	101314806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_101314870_101314980_101315095_101315441
ENSMUSG00000097715.3_12630169_12636321_1	chr13	-	899	4	ISM	ENSMUSG00000097715.3	ENSMUST00000220758.2	1942	7	28956	223	28854	-223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGGTGGGCTCCTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	12636321	12630168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_12630739_12632613_12632739_12634654_12634784_12636246
ENSMUSG00000097715.3_12630397_12638859_1	chr13	-	848	5	ISM	ENSMUSG00000097715.3	ENSMUST00000220647.2	1159	7	26316	-230	26316	230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTGTACTTTTATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	12638859	12630396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_12630739_12632613_12632739_12634654_12634784_12636246_12636397_12638757
ENSMUSG00000097715.3_12630545_12664882_1	chr13	-	948	7	FSM	ENSMUSG00000097715.3	ENSMUST00000220647.2	1159	7	293	-82	293	82	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTTTCCTTAGGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	12664882	12630544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_12630739_12632613_12632739_12634654_12634784_12636246_12636397_12638757_12638981_12645583_12645634_12664805
ENSMUSG00000097715.3_12632656_12665029_1	chr13	-	859	6	ISM	ENSMUSG00000097715.3	ENSMUST00000220647.2	1159	7	146	2029	146	-2029	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTTGCCTGGAACATTG	NA	NA	NA	NA	NA	NA	NA	NA	12665029	12632655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_12632739_12634654_12634784_12636246_12636397_12638757_12638981_12645583_12645634_12664805
ENSMUSG00000097715.3_12632695_12665175_1	chr13	-	966	6	ISM	ENSMUSG00000097715.3	ENSMUST00000220647.2	1159	7	0	2068	0	-2068	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTCTTTGACAACCCCC	NA	NA	NA	NA	NA	NA	NA	NA	12665175	12632694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_12632739_12634654_12634784_12636246_12636397_12638757_12638981_12645583_12645634_12664805
ENSMUSG00000097715.3_12636246_12665277_1	chr13	-	896	4	ISM	ENSMUSG00000097715.3	ENSMUST00000220647.2	1159	7	-102	5619	0	-5619	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGGGACATGACAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	12665277	12636245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_12636397_12638757_12638981_12645583_12645634_12664805
ENSMUSG00000097768.3_93589024_93591556_1	chr16	-	1347	2	FSM	ENSMUSG00000097768.3	ENSMUST00000180967.3	1580	2	233	0	233	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACACCTTTAAATAATA	NA	NA	NA	NA	NA	NA	NA	NA	93591556	93589023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_93590271_93591456
ENSMUSG00000098172.8_56581773_56584379_1	chr12	+	589	2	FSM	ENSMUSG00000098172.8	ENST00000521292.2	595	2	7	-1	7	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGCTACAGCACTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	56581772	56584379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_56582170_56584187
ENSMUSG00000098234.8_10012250_10013122_1	chr1	-	488	3	FSM	ENSMUSG00000098234.8	ENSMUST00000182819.8	816	3	326	2	326	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTGTGGGCAGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	10013122	10012249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_10012381_10012547_10012617_10012834
ENSMUSG00000098274.8_55786706_55789925_1	chr16	+	336	4	ISM	ENSMUSG00000098371.2	ENSMUST00000122365.2	611	6	0	11159	0	-11159	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTGCATCTCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	55786705	55789925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872
ENSMUSG00000098274.8_55786910_55790538_1	chr16	+	388	4	ISM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	272	1260	272	-1260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2627	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTATGGGGATGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	55786909	55790538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_55786986_55787422_55787534_55789872_55790010_55790474
ENSMUSG00000098332.3_72947000_72949827_1	chr9	+	262	2	FSM	ENSMUSG00000098332.3	ENSMUST00000184126.3	496	2	0	234	0	-234	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGGAATTGCTGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	72946999	72949827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_72947148_72949713
ENSMUSG00000098374.2_29904883_29916151_1	chr17	+	948	9	ISM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	25314	8802	25314	-8802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGGCAGCGAGCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	29904882	29916151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057
ENSMUSG00000098488.8_119860538_119868354_1	chr2	+	1492	12	ISM	ENSMUSG00000033852.17	ENST00000342159.6	2749	20	-12	3722	-12	-3722	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGGTTGAGCATGGC	NA	NA	NA	NA	NA	NA	NA	NA	119860537	119868354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119865078_119865152_119865400_119865538_119865676_119865806_119866495_119866632_119866869_119867001_119867227_119867339_119868218
ENSMUSG00000098488.8_119860940_119869413_1	chr2	+	1374	13	ISM	ENSMUSG00000033852.17	ENST00000342159.6	2749	20	390	2663	390	-2663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACACAGGTGACAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	119860939	119869413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119865078_119865152_119865400_119865538_119865676_119865806_119866495_119866632_119866869_119867001_119867227_119867339_119868218_119868355_119868976_119869114_119869343
ENSMUSG00000098488.8_119860977_119869482_1	chr2	+	1406	13	ISM	ENSMUSG00000033852.17	ENST00000342159.6	2749	20	427	2594	427	-2594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGAGCGTGCTCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	119860976	119869482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119865078_119865152_119865400_119865538_119865676_119865806_119866495_119866632_119866869_119867001_119867227_119867339_119868218_119868355_119868976_119869114_119869343
ENSMUSG00000098488.8_119861788_119869815_1	chr2	+	1504	12	ISM	ENSMUSG00000033852.17	ENST00000342159.6	2749	20	1238	2261	1238	-2261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGCTTCAGAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	119861787	119869815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119861884_119862055_119862133_119865078_119865152_119865400_119865538_119865676_119865806_119866495_119866632_119866869_119867001_119867227_119867339_119868218_119868355_119868976_119869114_119869343_119869567_119869697
ENSMUSG00000098488.8_119865399_119870443_1	chr2	+	1503	11	ISM	ENSMUSG00000098488.8	ENST00000452633.5	2238	15	0	1633	0	-1633	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGTGCTTGGGCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	119865398	119870443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119865538_119865676_119865806_119866495_119866632_119866869_119867001_119867227_119867339_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338
ENSMUSG00000098488.8_119865725_119870710_1	chr2	+	1403	11	ISM	ENSMUSG00000098488.8	ENST00000452633.5	2238	15	326	1366	326	-1366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTCCCCTCGCCCACGCC	NA	NA	NA	NA	NA	NA	NA	NA	119865724	119870710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119865806_119866495_119866632_119866869_119867001_119867227_119867339_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623
ENSMUSG00000098488.8_119866516_119870973_1	chr2	+	1410	11	ISM	ENSMUSG00000098488.8	ENST00000452633.5	2238	15	1117	1103	1117	-1103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCCCCAACCAGCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	119866515	119870973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119866632_119866869_119867001_119867227_119867339_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958
ENSMUSG00000098488.8_119866570_119871037_1	chr2	+	1420	11	ISM	ENSMUSG00000098488.8	ENST00000452633.5	2238	15	1171	1039	1171	-1039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATACTAGCTGCCCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	119866569	119871037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119866632_119866869_119867001_119867227_119867339_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958
ENSMUSG00000098488.8_119866870_119872078_1	chr2	+	1836	12	ISM	ENSMUSG00000098488.8	ENST00000452633.5	2238	15	1471	-2	1471	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTAGGCCGGAGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	119866869	119872078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_119867001_119867227_119867339_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871126_119871601_119871789_119871875
ENSMUSG00000098950.8_155920279_155940281_1	chr2	-	729	7	ISM	ENSMUSG00000074643.13	ENST00000352393.8	1940	18	13548	4851	13540	-4851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGGGACCTCAGCACGCC	NA	NA	NA	NA	NA	NA	NA	NA	155940281	155920278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155940149
ENSMUSG00000099009.2_127595925_127626860_2	chr10	+	793	5	NNC	ENSMUSG00000099009.2	novel	914	4	NA	NA	120	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTATTGGACTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	127595924	127626860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_127596120_127598833_127599060_127624703_127624736_127626057_127626222_127626684
ENSMUSG00000099009.2_127595925_127626860_3	chr10	+	794	4	FSM	ENSMUSG00000099009.2	ENST00000398138.5	914	4	120	0	120	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTATTGGACTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	127595924	127626860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_127596120_127598833_127599093_127626057_127626222_127626684
ENSMUSG00000099041.2_30130579_30146150_1	chr2	+	1082	2	ISM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	2845	7652	2845	-7647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCTTCTACATCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	30130578	30146150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30130690_30145179
ENSMUSG00000099041.2_30156875_30171149_1	chr2	+	853	9	FSM	ENSMUSG00000079484.13	ENST00000308941.9	809	9	-44	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTACCAAGGTTGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	30156874	30171149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_30156954_30159700_30159864_30164487_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30169966_30170096_30170182_30170300_30171021
ENSMUSG00000099041.2_30159699_30171149_1	chr2	+	775	8	NNC	ENSMUSG00000079484.13	novel	809	9	NA	NA	2780	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTACCAAGGTTGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	30159698	30171149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_30159864_30164488_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30169966_30170096_30170182_30170300_30171021
ENSMUSG00000099041.2_30159699_30171149_2	chr2	+	776	8	ISM	ENSMUSG00000079484.13	ENST00000308941.9	809	9	2780	0	2780	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTACCAAGGTTGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	30159698	30171149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30159864_30164487_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30169966_30170096_30170182_30170300_30171021
ENSMUSG00000099041.2_30159791_30171149_1	chr2	+	706	9	ISM	ENSMUSG00000079484.13	ENST00000372592.8	831	10	2872	0	2872	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTACCAAGGTTGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	30159790	30171149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_30159864_30164487_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021
ENSMUSG00000099083.8_102449321_102455643_1	chr15	-	260	3	ISM	ENSMUSG00000099083.8	ENSMUST00000169033.8	2165	11	77880	3563	-18183	-3563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATGAAGATCCAGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	102455643	102449320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102449373_102454839_102454993_102455588
ENSMUSG00000099083.8_102454963_102459872_1	chr15	-	278	4	ISM	ENSMUSG00000099083.8	ENSMUST00000169033.8	2165	11	73651	9205	-22412	-9205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAATCAATGGAGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	102459872	102454962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102454993_102455588_102455703_102456207_102456308_102459838
ENSMUSG00000099083.8_102456262_102462285_1	chr15	-	271	3	ISM	ENSMUSG00000099083.8	ENSMUST00000169033.8	2165	11	71238	10504	-24825	-10504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACCATGCCTATGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	102462285	102456261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_102456308_102459838_102459997_102462218
ENSMUSG00000099449.2_18664680_18706738_1	chr11	-	885	3	FSM	ENSMUSG00000099449.2	ENST00000653254.1	1166	3	-5	286	0	-286	multi-exon	FALSE	canonical	NA	NA	NA	NA	1926	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCACCTTGGGAATGCG	NA	NA	NA	NA	NA	NA	NA	NA	18706738	18664679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_18665404_18706444_18706497_18706629
ENSMUSG00000099908.2_18741066_18751720_1	chr16	+	583	5	ISM	ENSMUSG00000022702.17	ENST00000340170.8	3393	21	45043	37339	45043	4959	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTACCCCCTCCTTCGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	18741065	18751720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617
ENSMUSG00000099908.2_18744481_18753929_1	chr16	+	576	4	ISM	ENSMUSG00000022702.17	ENST00000340170.8	3393	21	48458	35130	48458	7168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGGTAGCTACTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	18744480	18753929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_18744614_18746187_18746274_18751617_18751813_18753767
ENSMUSG00000100130.2_66325585_66355438_1	chr9	-	395	2	ISM	ENSMUSG00000100130.2	ENST00000559303.2	581	4	2516	0	340	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAGTGAAACAGGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	66355438	66325584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_66325881_66355339
ENSMUSG00000100135.2_45006832_45058479_1	chr2	+	555	3	FSM	ENSMUSG00000100135.2	ENST00000413525.2	586	3	37	-6	37	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCTATTCCAAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	45006831	45058479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_45007029_45046934_45047073_45058259
ENSMUSG00000100135.2_45006832_45058479_2	chr2	+	551	3	NNC	ENSMUSG00000100135.2	novel	586	3	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCTATTCCAAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	45006831	45058479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_45007029_45046938_45047073_45058259
ENSMUSG00000100135.2_45006832_45058479_3	chr2	+	552	3	NNC	ENSMUSG00000100135.2	novel	586	3	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCTATTCCAAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	45006831	45058479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_45007029_45046934_45047073_45058262
ENSMUSG00000100135.2_45006832_45058479_4	chr2	+	549	3	NNC	ENSMUSG00000100135.2	novel	586	3	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCTATTCCAAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	45006831	45058479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_45007029_45046934_45047067_45058259
ENSMUSG00000100180.2_42363750_42394787_1	chr1	-	693	2	NNC	ENSMUSG00000100180.2	novel	1271	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTCAGTATAGACTATCT	NA	NA	NA	NA	NA	NA	NA	NA	42394787	42363749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_42364251_42394595
ENSMUSG00000100254.2_101733090_101742833_1	chr7	+	1805	8	ISM	ENSMUSG00000100254.2	ENSMUST00000124189.3	2874	13	767	2770	767	-2770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGGCCATGTACGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	101733089	101742833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101733788_101735604_101735818_101736722_101736888_101737322_101737498_101738307_101738509_101739119_101739283_101739729_101739823_101742736
ENSMUSG00000100254.2_101733226_101743473_1	chr7	+	1804	9	ISM	ENSMUSG00000100254.2	ENSMUST00000124189.3	2874	13	903	2130	903	-2130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTACCTGTCCTACTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	101733225	101743473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101733788_101735604_101735818_101736722_101736888_101737322_101737498_101738307_101738509_101739119_101739283_101739729_101739823_101742736_101742930_101743434
ENSMUSG00000100254.2_101733345_101744405_1	chr7	+	1805	10	NIC	ENSMUSG00000100254.2	novel	2874	13	NA	NA	1022	-1198	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGGAGAACGCGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	101733344	101744405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_101733788_101735604_101735818_101736722_101736888_101737322_101737498_101738307_101738509_101739119_101739283_101739729_101739823_101742736_101742930_101743434_101743563_101744374
ENSMUSG00000100254.2_101733412_101744448_1	chr7	+	1781	10	NIC	ENSMUSG00000100254.2	novel	2874	13	NA	NA	1089	-1155	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGCAGCGCTACATAG	NA	NA	NA	NA	NA	NA	NA	NA	101733411	101744448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_101733788_101735604_101735818_101736722_101736888_101737322_101737498_101738307_101738509_101739119_101739283_101739729_101739823_101742736_101742930_101743434_101743563_101744374
ENSMUSG00000100254.2_101733542_101745129_1	chr7	+	1780	11	NIC	ENSMUSG00000100254.2	novel	2874	13	NA	NA	1219	-474	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAAGAACCTGGCGGCG	NA	NA	NA	NA	NA	NA	NA	NA	101733541	101745129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_101733788_101735604_101735818_101736722_101736888_101737322_101737498_101738307_101738509_101739119_101739283_101739729_101739823_101742736_101742930_101743434_101743563_101744374_101744512_101745063
ENSMUSG00000100254.2_101733632_101745211_1	chr7	+	1772	11	NIC	ENSMUSG00000100254.2	novel	2874	13	NA	NA	1309	-392	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCTTCCAGAACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	101733631	101745211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_101733788_101735604_101735818_101736722_101736888_101737322_101737498_101738307_101738509_101739119_101739283_101739729_101739823_101742736_101742930_101743434_101743563_101744374_101744512_101745063
ENSMUSG00000100254.2_101733673_101745274_1	chr7	+	1794	11	NIC	ENSMUSG00000100254.2	novel	2874	13	NA	NA	1350	-329	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGGAGACCGAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	101733672	101745274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_101733788_101735604_101735818_101736722_101736888_101737322_101737498_101738307_101738509_101739119_101739283_101739729_101739823_101742736_101742930_101743434_101743563_101744374_101744512_101745063
ENSMUSG00000100254.2_101735603_101745420_1	chr7	+	1827	10	NIC	ENSMUSG00000100254.2	novel	2874	13	NA	NA	3280	-183	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGAAGGAGATCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	101735602	101745420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_101735818_101736722_101736888_101737322_101737498_101738307_101738509_101739119_101739283_101739729_101739823_101742736_101742930_101743434_101743563_101744374_101744512_101745063
ENSMUSG00000100257.2_130598684_130611808_1	chr1	-	559	4	NNC	ENSMUSG00000100257.2	novel	706	5	NA	NA	0	-673	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1655	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTAGGGGGTGTTATCC	NA	NA	NA	NA	NA	NA	NA	NA	130611808	130598683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_130598811_130609885_130609977_130610538_130610716_130611644
ENSMUSG00000100341.2_91286527_91287572_1	chr9	+	929	2	FSM	ENSMUSG00000100341.2	ENST00000659452.1	1822	2	-49	942	0	-942	multi-exon	FALSE	canonical	NA	NA	NA	NA	945	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTCAAAGTGGTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	91286526	91287572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_91286674_91286790
ENSMUSG00000100706.7_49296832_49297549_1	chr8	+	353	3	FSM	ENSMUSG00000100706.7	ENSMUST00000186135.2	948	3	0	595	0	-138	multi-exon	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCGGCCCGCCCTTGACG	NA	NA	NA	NA	NA	NA	NA	NA	49296831	49297549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_49296927_49297137_49297286_49297439
ENSMUSG00000100706.7_49296832_49297549_2	chr8	+	344	3	NNC	ENSMUSG00000100706.7	novel	487	3	NA	NA	0	-138	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCGGCCCGCCCTTGACG	NA	NA	NA	NA	NA	NA	NA	NA	49296831	49297549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_49296927_49297137_49297282_49297444
ENSMUSG00000100706.7_49297138_49297687_1	chr8	+	392	2	ISM	ENSMUSG00000100706.7	ENST00000315302.6	487	3	306	0	306	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTCCCAGCTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	49297137	49297687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_49297282_49297439
ENSMUSG00000100706.7_49297138_49297687_2	chr8	+	387	2	NNC	ENSMUSG00000100706.7	novel	487	3	NA	NA	306	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTCCCAGCTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	49297137	49297687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_49297282_49297444
ENSMUSG00000100940.2_87044043_87044880_1	chr1	-	362	2	FSM	ENSMUSG00000100940.2	ENST00000407532.2	358	2	-4	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCCAAATGTTAACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	87044880	87044042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_87044287_87044762
ENSMUSG00000101026.2_74644098_74647261_1	chr15	-	135	2	FSM	ENSMUSG00000101026.2	ENST00000637396.2	291	2	41	115	41	-115	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCTCCTGCTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	74647261	74644097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_74644179_74647207
ENSMUSG00000101389.2_11356210_11367730_1	chr19	+	334	4	NNC	ENSMUSG00000101389.2	novel	341	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCACTTTAATTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	11356209	11367730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_11356261_11358696_11358817_11363746_11363804_11367624
ENSMUSG00000101389.2_11356210_11367730_2	chr19	+	338	4	NNC	ENSMUSG00000101389.2	novel	341	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCACTTTAATTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	11356209	11367730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_11356261_11358687_11358817_11363746_11363799_11367624
ENSMUSG00000101389.2_11356210_11367730_3	chr19	+	343	4	FSM	ENSMUSG00000101389.2	ENST00000532114.6	341	4	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCACTTTAATTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	11356209	11367730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_11356261_11358687_11358817_11363746_11363804_11367624
ENSMUSG00000101645.2_84447040_84480519_1	chr2	-	1461	7	ISM	ENSMUSG00000034101.15	ENST00000673683.1	5296	19	146	15898	146	-15898	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACGTGCGGAAGCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	84480519	84447039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84480474
ENSMUSG00000101645.2_84447095_84480578_1	chr2	-	1465	7	ISM	ENSMUSG00000034101.15	ENST00000673683.1	5296	19	87	15953	87	-15953	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATGCAGCTGCATACCT	NA	NA	NA	NA	NA	NA	NA	NA	84480578	84447094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84480474
ENSMUSG00000101645.2_84447154_84480650_1	chr2	-	1478	7	ISM	ENSMUSG00000034101.15	ENST00000673683.1	5296	19	15	16012	15	-16012	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCTGAGCTGCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	84480650	84447153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84480474
ENSMUSG00000101678.4_31326434_31331325_1	chr5	-	727	5	ISM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	6163	13085	520	3924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGATTCCTGAGGATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	31331325	31326433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111
ENSMUSG00000101693.2_133183111_133184690_1	chr1	-	1114	2	NNC	ENSMUSG00000101693.2	novel	1197	2	NA	NA	78	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGTGGGGTTAAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	133184690	133183110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_133184207_133184672
ENSMUSG00000101693.2_133183111_133184856_1	chr1	-	1280	2	NNC	ENSMUSG00000101693.2	novel	1197	2	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGTGGGGTTAAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	133184856	133183110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_133184196_133184661
ENSMUSG00000101693.2_133183111_133184856_2	chr1	-	1285	2	FSM	ENSMUSG00000101693.2	ENST00000654944.1	1197	2	-88	0	-88	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGTGGGGTTAAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	133184856	133183110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_133184205_133184665
ENSMUSG00000101892.2_57885666_57892119_1	chr15	-	537	3	ISM	ENSMUSG00000101892.2	ENSMUST00000100655.5	1341	6	5592	11	5592	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTCCCAGGTAATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	57892119	57885665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_57885960_57888669_57888803_57892009
ENSMUSG00000101892.2_57885803_57892171_1	chr15	-	452	3	ISM	ENSMUSG00000101892.2	ENSMUST00000100655.5	1341	6	5540	148	5540	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAATCAGTTCCACGTG	NA	NA	NA	NA	NA	NA	NA	NA	57892171	57885802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_57885960_57888669_57888803_57892009
ENSMUSG00000101892.2_57885858_57892269_1	chr15	-	495	3	ISM	ENSMUSG00000101892.2	ENSMUST00000100655.5	1341	6	5442	203	5442	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAAGAGTTTGAAGACAA	NA	NA	NA	NA	NA	NA	NA	NA	57892269	57885857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_57885960_57888669_57888803_57892009
ENSMUSG00000101892.2_57892106_57894498_1	chr15	-	481	2	ISM	ENSMUSG00000022362.14	ENSMUST00000176935.8	1326	4	45323	467	45081	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCTCAGGAGAATATGC	NA	NA	NA	NA	NA	NA	NA	NA	57894498	57892105	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_57892441_57894352
ENSMUSG00000101892.2_57892208_57895475_1	chr15	-	473	3	ISM	ENSMUSG00000101892.2	ENSMUST00000100655.5	1341	6	2236	6553	2236	-6553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCCGTCGGTCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	57895475	57892207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_57892441_57894352_57894497_57895379
ENSMUSG00000101892.2_57892335_57897587_1	chr15	-	454	4	ISM	ENSMUSG00000101892.2	ENSMUST00000100655.5	1341	6	124	6680	124	-6680	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGATTGCTTTGCACCCG	NA	NA	NA	NA	NA	NA	NA	NA	57897587	57892334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_57892441_57894352_57894497_57895379_57895476_57897479
ENSMUSG00000101892.2_57894352_57897711_1	chr15	-	473	3	ISM	ENSMUSG00000101892.2	ENSMUST00000100655.5	1341	6	0	8697	0	-8697	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGCTTATTCTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	57897711	57894351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_57894497_57895379_57895476_57897479
ENSMUSG00000102038.2_77040646_77041234_1	chr11	+	505	2	Genic_Genomic	ENSMUSG00000102038.2	novel	898	1	NA	NA	192	-117	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACAACGATGTGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	77040645	77041234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	Genic_Genomic_chr11_+_77040807_77040890
ENSMUSG00000102206.6_37145305_37292376_1	chr18	+	1099	3	ISM	ENSMUSG00000102206.6	ENST00000529310.6	5189	4	1344	28338	1325	-28065	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGCCAACAGTATCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	37145304	37292376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_37146286_37289207_37289267_37292317
ENSMUSG00000102206.6_37145590_37318161_1	chr18	+	1007	4	FSM	ENSMUSG00000102206.6	ENST00000529310.6	5189	4	1629	2553	1610	-2280	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCTAACAACCAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	37145589	37318161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_37146286_37289207_37289267_37292317_37292407_37317998
ENSMUSG00000102206.6_37145876_37318462_1	chr18	+	1022	4	FSM	ENSMUSG00000102206.6	ENST00000529310.6	5189	4	1915	2252	1896	-1979	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTTAAAAAGCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	37145875	37318462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_37146286_37289207_37289267_37292317_37292407_37317998
ENSMUSG00000102206.6_37145934_37318520_1	chr18	+	1022	4	FSM	ENSMUSG00000102206.6	ENST00000529310.6	5189	4	1973	2194	1954	-1921	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTCAGAACCTAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	37145933	37318520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_37146286_37289207_37289267_37292317_37292407_37317998
ENSMUSG00000102252.6_59632243_59645302_1	chr7	-	1760	8	ISM	ENSMUSG00000102252.6	ENSMUST00000059305.17	1932	10	9557	0	9557	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTCTCAGAAGTCAATG	NA	NA	NA	NA	NA	NA	NA	NA	59645302	59632242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153
ENSMUSG00000102252.6_59632413_59654859_1	chr7	-	1762	10	FSM	ENSMUSG00000102252.6	ENSMUST00000059305.17	1932	10	0	170	0	-163	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATACACACATACACA	NA	NA	NA	NA	NA	NA	NA	NA	59654859	59632412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
ENSMUSG00000102493.2_177971223_177971588_1	chr1	+	266	2	FSM	ENSMUSG00000102493.2	ENST00000366639.9	863	2	348	249	348	-249	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGGACATCGACACCCCC	NA	NA	NA	NA	NA	NA	NA	NA	177971222	177971588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_177971355_177971454
ENSMUSG00000102543.6_37939590_37973440_1	chr18	+	674	4	FSM	ENSMUSG00000102918.2	ENST00000617641.4	2285	4	125	1486	105	203	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGTGTGTGGACATA	NA	NA	NA	NA	NA	NA	NA	NA	37939589	37973440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_37939631_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000102644.6_92111541_92117639_1	chr5	+	545	3	NNC	ENSMUSG00000102644.6	novel	553	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTAGTTTGTGAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	92111540	92117639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_92111645_92112954_92113164_92117407
ENSMUSG00000102644.6_92111541_92117639_2	chr5	+	552	3	NNC	ENSMUSG00000102644.6	novel	553	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTAGTTTGTGAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	92111540	92117639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_92111645_92112955_92113164_92117399
ENSMUSG00000102644.6_92111541_92117639_3	chr5	+	553	3	FSM	ENSMUSG00000102644.6	ENST00000380837.7	553	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTAGTTTGTGAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	92111540	92117639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_92111645_92112954_92113164_92117399
ENSMUSG00000102802.4_40773293_40779426_1	chr6	+	771	7	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	9419	55303	9418	-55303	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCATTGATGGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	40773292	40779426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40773349_40773456_40773567_40773865_40774021_40774756_40774929_40776143_40776244_40777215_40777329_40779361
ENSMUSG00000102802.4_40773959_40781636_1	chr6	+	764	7	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	10085	53093	10084	-53093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTGGATCATGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	40773958	40781636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40774021_40774756_40774929_40776143_40776244_40777215_40777329_40779361_40779488_40781351_40781484_40781577
ENSMUSG00000102802.4_40774812_40790448_1	chr6	+	769	7	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	10938	44281	10937	-44281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAAAAGTCTGGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	40774811	40790448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40774929_40776143_40776244_40777215_40777329_40779361_40779488_40781351_40781484_40781577_40781680_40790369
ENSMUSG00000102802.4_40776202_40792792_1	chr6	+	786	8	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	12328	41937	12327	-41937	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACGTCCATAGCTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	40776201	40792792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40776244_40777215_40777329_40779361_40779488_40781351_40781484_40781577_40781680_40790369_40790484_40791275_40791364_40792723
ENSMUSG00000102802.4_40777309_40796332_1	chr6	+	753	8	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	13435	38397	13434	-38397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTTTTGCTGGGTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	40777308	40796332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40777329_40779361_40779488_40781351_40781484_40781577_40781680_40790369_40790484_40791275_40791364_40792723_40792842_40796279
ENSMUSG00000102802.4_40779457_40796441_1	chr6	+	747	7	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	15583	38288	15582	-38288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATCCCCCTGGTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	40779456	40796441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40779488_40781351_40781484_40781577_40781680_40790369_40790484_40791275_40791364_40792723_40792842_40796279
ENSMUSG00000102802.4_40781618_40800568_1	chr6	+	747	7	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	17744	34161	17743	-34161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTTACTGCCCTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	40781617	40800568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40781680_40790369_40790484_40791275_40791364_40792723_40792842_40796279_40796455_40796965_40797083_40800495
ENSMUSG00000102802.4_40790408_40800846_1	chr6	+	778	7	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	26534	33883	26533	-33883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGGACTCCTCATCAC	NA	NA	NA	NA	NA	NA	NA	NA	40790407	40800846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40790484_40791275_40791364_40792723_40792842_40796279_40796455_40796965_40797083_40800495_40800651_40800797
ENSMUSG00000102802.4_40792762_40802949_1	chr6	+	749	7	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	28888	31780	28887	-31780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATATTTCCCACCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	40792761	40802949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40792842_40796279_40796455_40796965_40797083_40800495_40800651_40800797_40800883_40801732_40801790_40802869
ENSMUSG00000102802.4_40792821_40802994_1	chr6	+	735	7	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	28947	31735	28946	-31735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTCCTGTGTCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	40792820	40802994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40792842_40796279_40796455_40796965_40797083_40800495_40800651_40800797_40800883_40801732_40801790_40802869
ENSMUSG00000102802.4_40796280_40803866_1	chr6	+	803	7	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	32406	30863	32405	-30863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATTTCCCCACTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	40796279	40803866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40796455_40796965_40797083_40800495_40800651_40800797_40800883_40801732_40801790_40802869_40802995_40803777
ENSMUSG00000102802.4_40796386_40806221_1	chr6	+	743	8	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	32512	28508	32511	-28508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAGAATAGTTTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	40796385	40806221	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40796455_40796965_40797083_40800495_40800651_40800797_40800883_40801732_40801790_40802869_40802995_40803777_40803867_40806175
ENSMUSG00000102802.4_40800495_40807731_1	chr6	+	757	7	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	36621	26998	36620	-26998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTGAAACTGGGACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	40800494	40807731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40800651_40800797_40800883_40801732_40801790_40802869_40802995_40803777_40803867_40806175_40806397_40807707
ENSMUSG00000102802.4_40800558_40807791_1	chr6	+	754	7	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	36684	26938	36683	-26938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTAACTGCTTCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	40800557	40807791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40800651_40800797_40800883_40801732_40801790_40802869_40802995_40803777_40803867_40806175_40806397_40807707
ENSMUSG00000102802.4_40800851_40808442_1	chr6	+	739	7	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	36977	26287	36976	-26287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAACATTCAGTACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	40800850	40808442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40800883_40801732_40801790_40802869_40802995_40803777_40803867_40806175_40806397_40807707_40807864_40808383
ENSMUSG00000102802.4_40803795_40809590_1	chr6	+	767	5	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	39921	25139	39920	-25139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATGATGTAAGTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	40803794	40809590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40803867_40806175_40806397_40807707_40807864_40808383_40808618_40809506
ENSMUSG00000102802.4_40806254_40810715_1	chr6	+	747	5	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	42380	24014	42379	-24014	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCCCTCTCAGTACATA	NA	NA	NA	NA	NA	NA	NA	NA	40806253	40810715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40806397_40807707_40807864_40808383_40808618_40809506_40809662_40810656
ENSMUSG00000102802.4_40806316_40810775_1	chr6	+	745	5	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	42442	23954	42441	-23954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGAGTTGGAATACATGG	NA	NA	NA	NA	NA	NA	NA	NA	40806315	40810775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40806397_40807707_40807864_40808383_40808618_40809506_40809662_40810656
ENSMUSG00000102802.4_40807750_40811754_1	chr6	+	750	5	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	43876	22975	43875	-22975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACAGCAATGCCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	40807749	40811754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40807864_40808383_40808618_40809506_40809662_40810656_40810826_40811676
ENSMUSG00000102802.4_40808422_40813918_1	chr6	+	764	6	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	44548	20811	44547	-20811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTAGGTTTCCAGCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	40808421	40813918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40808618_40809506_40809662_40810656_40810826_40811676_40811774_40813130_40813244_40813884
ENSMUSG00000102802.4_40808546_40815485_1	chr6	+	776	7	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	44672	19244	44671	-19244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCCTCAGCCCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	40808545	40815485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40808618_40809506_40809662_40810656_40810826_40811676_40811774_40813130_40813244_40813884_40814011_40815441
ENSMUSG00000102802.4_40809611_40817670_1	chr6	+	745	7	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	45737	17059	45736	-17059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGTTCATCAAAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	40809610	40817670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40809662_40810656_40810826_40811676_40811774_40813130_40813244_40813884_40814011_40815441_40815571_40817610
ENSMUSG00000102802.4_40810772_40819942_1	chr6	+	754	8	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	46898	14787	46897	-14787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGATAAAAGAGCTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	40810771	40819942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40810826_40811676_40811774_40813130_40813244_40813884_40814011_40815441_40815571_40817610_40817719_40819061_40819125_40819878
ENSMUSG00000102802.4_40811747_40821671_1	chr6	+	749	8	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	47873	13058	47872	-13058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCAACGACACTCTCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	40811746	40821671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40811774_40813130_40813244_40813884_40814011_40815441_40815571_40817610_40817719_40819061_40819125_40819878_40820014_40821623
ENSMUSG00000102802.4_40813183_40822715_1	chr6	+	761	8	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	49309	12014	49308	-12014	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAATCCTTCCAGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	40813182	40822715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40813244_40813884_40814011_40815441_40815571_40817610_40817719_40819061_40819125_40819878_40820014_40821623_40821709_40822661
ENSMUSG00000102802.4_40813969_40830565_1	chr6	+	762	8	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	50095	4164	50094	-4164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGACGCTGGGGAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	40813968	40830565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40814011_40815441_40815571_40817610_40817719_40819061_40819125_40819878_40820014_40821623_40821709_40822661_40822801_40830504
ENSMUSG00000102802.4_40817630_40831112_1	chr6	+	777	8	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	53756	3617	53755	-3617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACACGGCTGGGACTAGG	NA	NA	NA	NA	NA	NA	NA	NA	40817629	40831112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40817719_40819061_40819125_40819878_40820014_40821623_40821709_40822661_40822801_40830504_40830639_40830897_40830933_40831015
ENSMUSG00000102802.4_40819103_40832289_1	chr6	+	751	8	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	55229	2440	55228	-2440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACACTCTGATGCACGA	NA	NA	NA	NA	NA	NA	NA	NA	40819102	40832289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40819125_40819878_40820014_40821623_40821709_40822661_40822801_40830504_40830639_40830897_40830933_40831015_40831133_40832205
ENSMUSG00000102802.4_40819950_40832470_1	chr6	+	744	8	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	56076	2259	56075	-2259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGATATAGACTACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	40819949	40832470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40820014_40821623_40821709_40822661_40822801_40830504_40830639_40830897_40830933_40831015_40831133_40832205_40832355_40832449
ENSMUSG00000102802.4_40822702_40833672_1	chr6	+	755	8	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	58828	1057	58827	-1057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACATCCTGCCTTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	40822701	40833672	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40822801_40830504_40830639_40830897_40830933_40831015_40831133_40832205_40832355_40832449_40832535_40833147_40833205_40833593
ENSMUSG00000102802.4_40830531_40834719_1	chr6	+	755	8	ISM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	66657	10	66656	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGCATTGGTGAGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	40830530	40834719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_40830639_40830897_40830933_40831015_40831133_40832205_40832355_40832449_40832535_40833147_40833205_40833593_40833719_40834640
ENSMUSG00000102805.6_84404726_84417199_1	chr3	-	558	2	ISM	ENSMUSG00000074513.10	ENSMUST00000107687.9	1714	9	72593	215	72593	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAAGGCTTTTTTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	84417199	84404725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_84405199_84417114
ENSMUSG00000102805.6_84404859_84422995_1	chr3	-	571	3	ISM	ENSMUSG00000074513.10	ENSMUST00000143514.3	1343	9	66937	-184	66797	184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGTAAACATAATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	84422995	84404858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_84405199_84417114_84417290_84422939
ENSMUSG00000102805.6_84404920_84423035_1	chr3	-	550	3	ISM	ENSMUSG00000074513.10	ENSMUST00000143514.3	1343	9	66897	-123	66757	123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCCCTTTTCATACATA	NA	NA	NA	NA	NA	NA	NA	NA	84423035	84404919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_84405199_84417114_84417290_84422939
ENSMUSG00000102918.2_37939469_37973332_1	chr18	+	687	4	FSM	ENSMUSG00000102918.2	ENST00000617641.4	2285	4	4	1594	4	95	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCCAAGCCAACACCCCC	NA	NA	NA	NA	NA	NA	NA	NA	37939468	37973332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_37939631_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000102918.2_37939577_37972979_1	chr18	+	379	5	FSM	ENSMUSG00000102918.2	ENST00000617222.4	729	5	92	258	92	-258	multi-exon	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGGGGGCGCTGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	37939576	37972979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_37939631_37941877_37942031_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000102976.7_133566622_133582636_1	chr1	-	1634	6	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	6420	18944	6420	-18944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATTACGAGTGGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	133582636	133566621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710
ENSMUSG00000102976.7_133566880_133582806_1	chr1	-	1636	5	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	6250	19202	6250	-19202	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGCGGAGTGTAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	133582806	133566879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710
ENSMUSG00000102976.7_133575208_133588402_1	chr1	-	263	4	ISM	ENSMUSG00000102976.7	ENST00000367211.6	2985	19	668	25953	654	-25953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTCCTCGGAGCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	133588402	133575207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_133575268_133581710_133581771_133583082_133583137_133588313
ENSMUSG00000103310.2_37154160_37292339_1	chr18	+	806	3	ISM	ENSMUSG00000103310.2	ENST00000527624.1	2138	4	823	26101	823	-26101	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATTCTACGGGCTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	37154159	37292339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_37154885_37289207_37289267_37292317
ENSMUSG00000103310.2_37154251_37292373_1	chr18	+	749	3	ISM	ENSMUSG00000103310.2	ENST00000527624.1	2138	4	914	26067	914	-26067	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTGGCCAACAGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	37154250	37292373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_37154885_37289207_37289267_37292317
ENSMUSG00000103310.2_37154310_37292381_1	chr18	+	1482	3	ISM	ENSMUSG00000103310.2	ENST00000531613.2	5223	4	1000	28333	973	-26059	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAGTATCCAGTGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	37154309	37292381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_37155619_37289157_37289267_37292317
ENSMUSG00000103310.2_37154360_37318824_1	chr18	+	2291	4	FSM	ENSMUSG00000103310.2	ENSMUST00000047614.4	5335	4	1158	1886	1023	384	multi-exon	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGGGGGAAAATGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	37154359	37318824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_37155677_37289207_37289267_37292317_37292407_37317998
ENSMUSG00000103310.2_37154391_37318081_1	chr18	+	725	4	FSM	ENSMUSG00000103310.2	ENST00000527624.1	2138	4	1054	359	1054	-359	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAACAGTCCGGTCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	37154390	37318081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_37154885_37289207_37289267_37292317_37292407_37317998
ENSMUSG00000103310.2_37154438_37318145_1	chr18	+	742	4	FSM	ENSMUSG00000103310.2	ENST00000527624.1	2138	4	1101	295	1101	-295	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATCCGGCAGGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	37154437	37318145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_37154885_37289207_37289267_37292317_37292407_37317998
ENSMUSG00000103310.2_37154822_37318480_1	chr18	+	1477	4	FSM	ENSMUSG00000103310.2	ENST00000531613.2	5223	4	1512	2234	1485	40	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCTGGTGTTAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	37154821	37318480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_37155619_37289157_37289267_37292317_37292407_37317998
ENSMUSG00000103310.2_37154903_37318548_1	chr18	+	1464	4	FSM	ENSMUSG00000103310.2	ENST00000531613.2	5223	4	1593	2166	1566	108	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCCTTTCTCCCCCGCCG	NA	NA	NA	NA	NA	NA	NA	NA	37154902	37318548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_37155619_37289157_37289267_37292317_37292407_37317998
ENSMUSG00000103310.2_37155061_37318100_1	chr18	+	831	4	ISM	ENSMUSG00000102206.6	ENST00000525929.2	5149	5	11081	2614	11081	-2341	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTGCCAGACAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	37155060	37318100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_37155642_37289207_37289267_37292317_37292407_37317998
ENSMUSG00000103396.2_71372400_71372895_1	chr3	-	275	2	FSM	ENSMUSG00000103396.2	ENST00000649813.2	349	2	100	-26	100	26	multi-exon	FALSE	canonical	NA	NA	NA	NA	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAACCACTAATGATACAG	NA	NA	NA	NA	NA	NA	NA	NA	71372895	71372399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_71372621_71372841
ENSMUSG00000103396.2_71372400_71372895_2	chr3	-	274	2	NNC	ENSMUSG00000103396.2	novel	349	2	NA	NA	100	26	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAACCACTAATGATACAG	NA	NA	NA	NA	NA	NA	NA	NA	71372895	71372399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_71372621_71372842
ENSMUSG00000103396.2_71372454_71373002_1	chr3	-	327	2	NNC	ENSMUSG00000103396.2	novel	349	2	NA	NA	0	-28	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACTAATAAAAACTCACT	NA	NA	NA	NA	NA	NA	NA	NA	71373002	71372453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_71372621_71372842
ENSMUSG00000103396.2_71372454_71373002_2	chr3	-	328	2	FSM	ENSMUSG00000103396.2	ENST00000649813.2	349	2	-7	28	0	-28	multi-exon	FALSE	canonical	NA	NA	NA	NA	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACTAATAAAAACTCACT	NA	NA	NA	NA	NA	NA	NA	NA	71373002	71372453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_71372621_71372841
ENSMUSG00000103800.2_37086075_37126721_1	chr18	+	948	2	NNC	ENSMUSG00000103800.2	novel	2269	2	NA	NA	239	-1084	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAATTACTATTCTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	37086074	37126721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_37086260_37125958
ENSMUSG00000103800.2_37086132_37126767_1	chr18	+	937	2	NNC	ENSMUSG00000103800.2	novel	2269	2	NA	NA	296	-1038	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCTCTAACTATGACGT	NA	NA	NA	NA	NA	NA	NA	NA	37086131	37126767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_37086260_37125958
ENSMUSG00000103800.2_37086180_37126820_1	chr18	+	942	2	NNC	ENSMUSG00000103800.2	novel	2269	2	NA	NA	344	-985	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGGCTACAGCCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	37086179	37126820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_37086260_37125958
ENSMUSG00000103800.2_37113330_37126665_1	chr18	+	926	2	Fusion	ENSMUSG00000104240.2_ENSMUSG00000103800.2	novel	2391	2	NA	NA	220	-1140	multi-exon	TRUE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGGTGACCTGCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	37113329	37126665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	Fusion_chr18_+_37113476_37125885
ENSMUSG00000104063.2_37875294_37897084_1	chr18	+	2142	3	NNC	ENSMUSG00000103088.2	novel	2151	3	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCATGGTCCTGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	37875293	37897084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_37875495_37885037_37886038_37896143
ENSMUSG00000104063.2_37875294_37897084_2	chr18	+	2148	3	NNC	ENSMUSG00000103088.2	novel	2151	3	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2720	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCATGGTCCTGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	37875293	37897084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_37875522_37885058_37886038_37896143
ENSMUSG00000104063.2_37875294_37897084_3	chr18	+	2151	3	NNC	ENSMUSG00000103088.2	novel	2151	3	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCATGGTCCTGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	37875293	37897084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_37875479_37885012_37886038_37896143
ENSMUSG00000104063.2_37875294_37897084_4	chr18	+	2146	3	NNC	ENSMUSG00000103088.2	novel	2151	3	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	3088	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCATGGTCCTGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	37875293	37897084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_37875474_37885012_37886038_37896143
ENSMUSG00000104063.2_37875294_37897084_5	chr18	+	2148	3	NNC	ENSMUSG00000103088.2	novel	2151	3	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1980	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCATGGTCCTGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	37875293	37897084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_37875465_37885001_37886038_37896143
ENSMUSG00000104082.3_83722830_83730661_1	chr3	+	302	3	ISM	ENSMUSG00000104082.3	ENST00000347063.9	451	4	49	6530	49	-6530	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATCCTTCCCACGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	83722829	83730661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_83722886_83726856_83726971_83730529
ENSMUSG00000104082.3_83726857_83737193_1	chr3	+	345	3	ISM	ENSMUSG00000104082.3	ENSMUST00000193706.3	948	7	19582	2333	4076	2	internal_fragment	FALSE	non_canonical	NA	NA	NA	NA	2796	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATCGTTCTAGACGTGC	NA	NA	NA	NA	NA	NA	NA	NA	83726856	83737193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_83726971_83730529_83730662_83737094
ENSMUSG00000104082.3_83730529_83737191_1	chr3	+	233	2	ISM	ENSMUSG00000104082.3	ENST00000347063.9	451	4	7748	0	7748	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTATCGTTCTAGACGT	NA	NA	NA	NA	NA	NA	NA	NA	83730528	83737191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_83730664_83737093
ENSMUSG00000104252.6_37154734_37318421_1	chr18	+	722	4	FSM	ENSMUSG00000103310.2	ENST00000527624.1	2138	4	1397	19	1397	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGTTCCCTGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	37154733	37318421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_37154885_37289207_37289267_37292317_37292407_37317998
ENSMUSG00000104252.6_37155430_37319075_1	chr18	+	1464	4	FSM	ENSMUSG00000103310.2	ENST00000531613.2	5223	4	2120	1639	2093	635	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCTCACGCTATTAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	37155429	37319075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_37155619_37289157_37289267_37292317_37292407_37317998
ENSMUSG00000104252.6_37289173_37319285_1	chr18	+	1470	3	ISM	ENSMUSG00000102697.2	ENSMUST00000047479.3	5888	4	12617	1425	12617	-1425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGAGAATCCAGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	37289172	37319285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_37289267_37292317_37292407_37317998
ENSMUSG00000104301.4_75182295_75304193_1	chr3	-	1642	12	ISM	ENSMUSG00000104301.4	ENSMUST00000193989.4	2413	15	84854	0	54916	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAACAAACACACTAC	NA	NA	NA	NA	NA	NA	NA	NA	75304193	75182294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_75182426_75205412_75205560_75209113_75209218_75230909_75231092_75239547_75239746_75240496_75240685_75242504_75242667_75245058_75245158_75246708_75246840_75265653_75265770_75289221_75289387_75304174
ENSMUSG00000104301.4_75182295_75304248_1	chr3	-	1697	12	ISM	ENSMUSG00000104301.4	ENSMUST00000193989.4	2413	15	84799	0	54861	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAACAAACACACTAC	NA	NA	NA	NA	NA	NA	NA	NA	75304248	75182294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_75182426_75205412_75205560_75209113_75209218_75230909_75231092_75239547_75239746_75240496_75240685_75242504_75242667_75245058_75245158_75246708_75246840_75265653_75265770_75289221_75289387_75304174
ENSMUSG00000104301.4_75209113_75336744_1	chr3	-	1729	11	ISM	ENSMUSG00000104301.4	ENSMUST00000193989.4	2413	15	52303	26818	22365	-26814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAATTGCTATCGACAC	NA	NA	NA	NA	NA	NA	NA	NA	75336744	75209112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_75209218_75230909_75231092_75239547_75239746_75240496_75240685_75242504_75242667_75245058_75245158_75246708_75246840_75265653_75265770_75289221_75289387_75304174_75304409_75336595
ENSMUSG00000104301.4_75230999_75338533_1	chr3	-	1681	11	ISM	ENSMUSG00000104301.4	ENST00000647816.1	2951	17	20576	48700	20576	-48700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCTTTATTTTCTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	75338533	75230998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_75231092_75239547_75239746_75240496_75240685_75242504_75242667_75245058_75245158_75246708_75246840_75265653_75265770_75289221_75289387_75304174_75304409_75336595_75336745_75338387
ENSMUSG00000104301.4_75239581_75357287_1	chr3	-	1665	11	ISM	ENSMUSG00000104301.4	ENST00000647816.1	2951	17	1822	57282	1822	-57282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCAGTGCTCCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	75357287	75239580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_75239746_75240496_75240685_75242504_75242667_75245058_75245158_75246708_75246840_75265653_75265770_75289221_75289387_75304174_75304409_75336595_75336745_75338387_75338556_75357199
ENSMUSG00000104301.4_75239705_75358137_1	chr3	-	1640	12	ISM	ENSMUSG00000104301.4	ENST00000647816.1	2951	17	972	57406	972	-57406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCTTTGCTCAGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	75358137	75239704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_75239746_75240496_75240685_75242504_75242667_75245058_75245158_75246708_75246840_75265653_75265770_75289221_75289387_75304174_75304409_75336595_75336745_75338387_75338556_75357199_75357375_75358125
ENSMUSG00000104301.4_75240653_75358729_1	chr3	-	1653	12	ISM	ENSMUSG00000104301.4	ENST00000647816.1	2951	17	380	58354	380	-58354	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTATGTCAGGTTTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	75358729	75240652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_75240685_75242504_75242667_75245058_75245158_75246708_75246840_75265653_75265770_75289221_75289387_75304174_75304409_75336595_75336745_75338387_75338556_75357199_75357375_75358125_75358303_75358684
ENSMUSG00000104301.4_75245078_75358940_1	chr3	-	1651	10	ISM	ENSMUSG00000104301.4	ENST00000647816.1	2951	17	169	62779	169	59097	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTAACATCCATGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	75358940	75245077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_75245158_75246708_75246840_75265653_75265770_75289221_75289387_75304174_75304409_75336595_75336745_75338387_75338556_75357199_75357375_75358125_75358303_75358684
ENSMUSG00000104301.4_75245131_75358994_1	chr3	-	1652	10	ISM	ENSMUSG00000104301.4	ENST00000647816.1	2951	17	115	62832	115	59044	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAATAACAACACAGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	75358994	75245130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_75245158_75246708_75246840_75265653_75265770_75289221_75289387_75304174_75304409_75336595_75336745_75338387_75338556_75357199_75357375_75358125_75358303_75358684
ENSMUSG00000104301.4_75246708_75359125_1	chr3	-	1757	9	ISM	ENSMUSG00000104301.4	ENST00000647816.1	2951	17	-16	64409	0	57467	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGAGCCTTCACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	75359125	75246707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_75246840_75265653_75265770_75289221_75289387_75304174_75304409_75336595_75336745_75338387_75338556_75357199_75357375_75358125_75358303_75358684
ENSMUSG00000104960.2_123301204_123301979_1	chr3	-	371	3	FSM	ENSMUSG00000104960.2	ENSMUST00000196466.2	448	3	74	3	3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGACTGTGTCCTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	123301979	123301203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_123301310_123301465_123301512_123301760
ENSMUSG00000105518.2_90512395_90513192_1	chr3	+	211	2	ISM	ENSMUSG00000001020.9	ENSMUST00000001046.7	498	3	1317	160	1317	-160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCCCGGAAGAAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	90512394	90513192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_90512460_90513046
ENSMUSG00000105987.5_23908043_23916148_1	chr5	-	383	3	ISM	ENSMUSG00000105987.5	ENSMUST00000199941.5	2804	4	1516	2396	-725	-2396	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAACCCGTGGGGCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	23916148	23908042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_23908348_23915363_23915407_23916113
ENSMUSG00000106133.2_24322774_24323725_1	chr5	-	779	2	Genic_Genomic	ENSMUSG00000106133.2	novel	349	1	NA	NA	-63	540	multi-exon	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGCTTAAAAGTCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24323725	24322773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	Genic_Genomic_chr5_-_24323402_24323574
ENSMUSG00000106864.4_31314035_31323331_1	chr5	-	1964	8	ISM	ENSMUSG00000106864.4	ENSMUST00000202639.4	4200	21	14130	170	8514	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCCCTTTCAGTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	31323331	31314034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229
ENSMUSG00000106864.4_31325394_31330306_1	chr5	-	732	6	ISM	ENSMUSG00000106864.4	ENSMUST00000202639.4	4200	21	7155	11529	1539	4964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGGACCTCAAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	31330306	31325393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125
ENSMUSG00000106864.4_31331148_31337461_1	chr5	-	784	3	ISM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	27	17799	0	-790	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGGAACGACCCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	31337461	31331147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31331434_31331575_31331840_31337227
ENSMUSG00000106918.4_31771283_31773831_1	chr5	+	210	3	ISM	ENSMUSG00000106918.4	ENSMUST00000031024.14	478	4	0	6157	0	-6157	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGCTCAGAGAAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	31771282	31773831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31771367_31771946_31771966_31773724
ENSMUSG00000106918.4_31771947_31779792_1	chr5	+	198	3	ISM	ENSMUSG00000106918.4	ENSMUST00000031024.14	478	4	664	196	664	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCCTAAATGAGAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	31771946	31779792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31771966_31773724_31773832_31779720
ENSMUSG00000106918.4_31773725_31779792_1	chr5	+	179	2	ISM	ENSMUSG00000106918.4	ENSMUST00000031024.14	478	4	2442	196	2442	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCCTAAATGAGAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	31773724	31779792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31773832_31779720
ENSMUSG00000107283.4_31298661_31303090_1	chr5	-	779	5	ISM	ENSMUSG00000107283.4	ENSMUST00000201353.4	846	8	8406	-199	308	141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGCTGGAGAGATGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	31303090	31298660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027
ENSMUSG00000107283.4_31299055_31303404_1	chr5	-	314	4	FSM	ENSMUSG00000107283.4	ENST00000405076.5	320	4	23	-17	-6	17	multi-exon	TRUE	canonical	NA	NA	NA	NA	2278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACTAACCACATCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	31303404	31299054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_31299195_31302043_31302097_31302589_31302623_31303316
ENSMUSG00000107283.4_31299055_31303404_2	chr5	-	417	4	FSM	ENSMUSG00000107283.4	ENST00000402722.5	394	4	-6	-17	-6	17	multi-exon	FALSE	canonical	NA	NA	NA	NA	4128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACTAACCACATCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	31303404	31299054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_31299195_31302838_31302935_31303027_31303121_31303316
ENSMUSG00000107283.4_31299055_31303404_3	chr5	-	414	4	NNC	ENSMUSG00000107283.4	novel	394	4	NA	NA	-6	17	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3934	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACTAACCACATCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	31303404	31299054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_31299195_31302838_31302935_31303027_31303121_31303319
ENSMUSG00000107482.3_43101813_43105997_1	chr7	+	428	4	ISM	ENSMUSG00000004610.5	ENSMUST00000004729.5	893	6	8306	1227	8306	-1227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGTGGTGACTGCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	43101812	43105997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_43101924_43102222_43102382_43103941_43104005_43105902
ENSMUSG00000107482.3_43101829_43105997_1	chr7	+	405	4	NNC	ENSMUSG00000004610.5	novel	893	6	NA	NA	8322	-1227	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGTGGTGACTGCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	43101828	43105997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_43101917_43102222_43102382_43103941_43104005_43105902
ENSMUSG00000108414.2_8701504_8703710_1	chr19	+	477	9	FSM	ENSMUSG00000108414.2	ENSMUST00000205909.2	709	9	135	97	-7	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTACCACATTGTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	8701503	8703710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUSG00000108414.2_8701767_8703807_1	chr19	+	526	7	NNC	ENSMUSG00000108414.2	novel	709	9	NA	NA	256	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	8701766	8703807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_8701848_8702035_8702086_8702377_8702411_8702811_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUSG00000108929.3_40790826_40797901_1	chr19	+	351	3	ISM	ENSMUSG00000108929.3	ENST00000344386.3	1348	8	32	18200	32	-18200	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAATGCAACGCTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	40790825	40797901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_40790895_40795259_40795359_40797718
ENSMUSG00000108929.3_40795279_40799115_1	chr19	+	368	3	ISM	ENSMUSG00000108929.3	ENST00000344386.3	1348	8	4485	16986	4485	-16986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACAAACGACATTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	40795278	40799115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_40795359_40797718_40797917_40799025
ENSMUSG00000108929.3_40797793_40804228_1	chr19	+	343	4	ISM	ENSMUSG00000108929.3	ENST00000344386.3	1348	8	6999	11873	6999	-11873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTTAACTCAAGAAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	40797792	40804228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_40797917_40799025_40799116_40801659_40801774_40804213
ENSMUSG00000108929.3_40797842_40804284_1	chr19	+	350	4	ISM	ENSMUSG00000108929.3	ENST00000344386.3	1348	8	7048	11817	7048	-11817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAGCAGTTTGACCCAT	NA	NA	NA	NA	NA	NA	NA	NA	40797841	40804284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_40797917_40799025_40799116_40801659_40801774_40804213
ENSMUSG00000108929.3_40804318_40815819_1	chr19	+	360	3	ISM	ENSMUSG00000108929.3	ENST00000344386.3	1348	8	13524	282	13524	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGAGAGTACTATGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	40804317	40815819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_40804349_40804656_40804780_40815613
ENSMUSG00000109112.2_100531670_100533546_1	chr11	-	427	2	FSM	ENSMUSG00000109112.2	ENST00000587304.3	1745	2	407	911	397	-900	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGTCCCCGAGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	100533546	100531669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100531996_100533445
ENSMUSG00000109112.2_100531735_100533594_1	chr11	-	410	2	FSM	ENSMUSG00000109112.2	ENST00000587304.3	1745	2	359	976	349	-965	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTGGGTGAATATGAG	NA	NA	NA	NA	NA	NA	NA	NA	100533594	100531734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100531996_100533445
ENSMUSG00000109112.2_100531889_100533789_1	chr11	-	451	2	FSM	ENSMUSG00000109112.2	ENST00000587304.3	1745	2	164	1130	154	-1119	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGGTCTTTGACATAT	NA	NA	NA	NA	NA	NA	NA	NA	100533789	100531888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100531996_100533445
ENSMUSG00000109324.3_44625548_44626955_1	chr7	-	888	2	ISM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	8961	135	8788	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTTCTGAGACAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	44626955	44625547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44626408_44626927
ENSMUSG00000109324.3_44625665_44627591_1	chr7	-	906	3	ISM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	8325	252	8152	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACCTGCAGCAGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	44627591	44625664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44626408_44626927_44627050_44627550
ENSMUSG00000109324.3_44625821_44628131_1	chr7	-	893	4	ISM	ENSMUSG00000109324.3	ENSMUST00000045325.14	1071	9	7649	-427	7612	361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGGTCAGACCCCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	44628131	44625820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098
ENSMUSG00000109324.3_44625953_44628388_1	chr7	-	926	5	ISM	ENSMUSG00000109324.3	ENSMUST00000045325.14	1071	9	7392	-295	7355	229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGCTGGCCTGGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	44628388	44625952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306
ENSMUSG00000109324.3_44626188_44635743_1	chr7	-	995	8	FSM	ENSMUSG00000109324.3	ENST00000610806.4	1123	8	128	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCCACTTCTCGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	44635743	44626187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ENSMUSG00000109324.3_44626248_44631317_1	chr7	-	1000	8	ISM	ENSMUSG00000109324.3	ENSMUST00000045325.14	1071	9	4463	0	4426	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTTCATAACTTATG	NA	NA	NA	NA	NA	NA	NA	NA	44631317	44626247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161
ENSMUSG00000109324.3_44626248_44635781_1	chr7	-	973	8	FSM	ENSMUSG00000109324.3	ENST00000610806.4	1123	8	90	60	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTTCATAACTTATG	NA	NA	NA	NA	NA	NA	NA	NA	44635781	44626247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ENSMUSG00000109324.3_44626324_44632975_1	chr7	-	990	9	ISM	ENSMUSG00000109324.3	ENSMUST00000107843.11	1508	11	3017	142	2768	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGCCAGGCTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	44632975	44626323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909
ENSMUSG00000109324.3_44626324_44635916_1	chr7	-	1032	8	FSM	ENSMUSG00000109324.3	ENST00000610806.4	1123	8	-45	136	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGCCAGGCTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	44635916	44626323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ENSMUSG00000109324.3_44627048_44635781_1	chr7	-	897	9	ISM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	135	1635	-1	-724	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAGTCCCCGTACACACA	NA	NA	NA	NA	NA	NA	NA	NA	44635781	44627047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ENSMUSG00000109324.3_44628122_44635916_1	chr7	-	856	7	ISM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	0	2709	0	-1798	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAATGCCTGCCTCATA	NA	NA	NA	NA	NA	NA	NA	NA	44635916	44628121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ENSMUSG00000109324.3_44628330_44635938_1	chr7	-	816	7	ISM	ENSMUSG00000109324.3	ENSMUST00000107843.11	1508	11	54	2148	-22	-2006	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAAAGACTACAAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	44635938	44628329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633503_44633558_44635706
ENSMUSG00000109336.2_28100501_28103089_1	chr7	-	466	3	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	32638	92	32527	-92	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTTTTTCTTACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	28103089	28100500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28100838_28101248_28101333_28103044
ENSMUSG00000109336.2_28100551_28103140_1	chr7	-	467	3	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	32587	142	32476	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTACCTTTCATCATTC	NA	NA	NA	NA	NA	NA	NA	NA	28103140	28100550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28100838_28101248_28101333_28103044
ENSMUSG00000109336.2_28101279_28104978_1	chr7	-	442	4	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	30749	870	30638	-870	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGAGCATGACAGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	28104978	28101278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913
ENSMUSG00000109336.2_28103071_28105428_1	chr7	-	466	4	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	30299	2662	30188	-2662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTATTCTCATGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	28105428	28103070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28103169_28103288_28103488_28104913_28105033_28105378
ENSMUSG00000109336.2_28103293_28105834_1	chr7	-	441	4	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	29893	2884	29782	-2884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGTGAGCCGGCTGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	28105834	28103292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28103488_28104913_28105033_28105378_28105465_28105793
ENSMUSG00000109336.2_28103345_28105892_1	chr7	-	447	4	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	29835	2936	29724	-2936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCTCCTCGACATGCC	NA	NA	NA	NA	NA	NA	NA	NA	28105892	28103344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28103488_28104913_28105033_28105378_28105465_28105793
ENSMUSG00000109336.2_28103401_28105976_1	chr7	-	475	4	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	29751	2992	29640	-2992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCGGGCATTACCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	28105976	28103400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28103488_28104913_28105033_28105378_28105465_28105793
ENSMUSG00000109336.2_28104940_28106084_1	chr7	-	470	3	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	29643	4531	29532	-4531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGAGCTACCGGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	28106084	28104939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28105033_28105378_28105465_28105793
ENSMUSG00000109336.2_28105016_28106112_1	chr7	-	422	3	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	29615	4607	29504	-4607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAAGCGGTTGCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	28106112	28105015	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28105033_28105378_28105465_28105793
ENSMUSG00000109336.2_28105411_28106918_1	chr7	-	485	4	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	28809	5002	28698	-5002	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGCTCATCGAAAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	28106918	28105410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28105465_28105793_28106113_28106655_28106743_28106893
ENSMUSG00000109336.2_28105913_28107427_1	chr7	-	464	4	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	28300	5504	28189	-5504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCAGAGAACTATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	28107427	28105912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28106113_28106655_28106743_28106893_28107004_28107360
ENSMUSG00000109336.2_28105972_28107477_1	chr7	-	455	4	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	28250	5563	28139	-5563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGCCTCCCCTCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	28107477	28105971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28106113_28106655_28106743_28106893_28107004_28107360
ENSMUSG00000109336.2_28106037_28107536_1	chr7	-	449	4	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	28191	5628	28080	-5628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGTCCTTCAGGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	28107536	28106036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28106113_28106655_28106743_28106893_28107004_28107360
ENSMUSG00000109336.2_28106723_28113332_1	chr7	-	406	4	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	22395	6314	22284	-6314	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAAGATAGCCCTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	28113332	28106722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28106743_28106893_28107004_28107360_28107601_28113296
ENSMUSG00000109336.2_28107388_28113561_1	chr7	-	478	2	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	22166	6979	22055	-6979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGAGGATGGCAGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	28113561	28107387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28107601_28113296
ENSMUSG00000109336.2_28107512_28113665_1	chr7	-	458	2	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	22062	7103	21951	-7103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGGAGCTTGGGGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	28113665	28107511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28107601_28113296
ENSMUSG00000109336.2_28113519_28123057_1	chr7	-	446	2	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	12670	13110	12559	-13110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAAGAGCGGCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	28123057	28113518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28113768_28122860
ENSMUSG00000109336.2_28113571_28123117_1	chr7	-	454	2	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	12610	13162	12499	-13162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCAGCCACCACACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	28123117	28113570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28113768_28122860
ENSMUSG00000109336.2_28113741_28135631_1	chr7	-	462	3	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	96	13332	-15	-13332	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGAGAAGGTGGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	28135631	28113740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_28113768_28122860_28123263_28135598
ENSMUSG00000109511.2_44465512_44478901_1	chr7	+	1376	2	FSM	ENSMUSG00000109511.2	ENSMUST00000208626.2	2708	2	0	1332	0	-664	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTGGCCCCAGCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44465511	44478901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44465897_44477910
ENSMUSG00000109511.2_44465820_44478655_1	chr7	+	833	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	308	1581	13	-910	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCCATAGCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	44465819	44478655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44465908_44477910
ENSMUSG00000109511.2_44465820_44479227_1	chr7	+	1479	2	FSM	ENSMUSG00000109511.2	ENST00000352066.8	1868	2	51	338	13	-338	multi-exon	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGTCAGTGAAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	44465819	44479227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44465908_44477836
ENSMUSG00000109561.2_96932354_96962680_1	chr13	+	1216	6	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	109	66929	109	-66929	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAAGATTCATCTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	96932353	96962680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96932808_96935118_96935400_96935865_96935973_96940615_96940772_96957821_96957965_96962605
ENSMUSG00000109561.2_96932440_96962725_1	chr13	+	1175	6	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	195	66884	195	-66884	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAAAAAAATGTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	96932439	96962725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96932808_96935118_96935400_96935865_96935973_96940615_96940772_96957821_96957965_96962605
ENSMUSG00000109561.2_96932589_96968024_1	chr13	+	1171	8	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	344	61585	344	-61585	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGACATTTAGAAATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	96932588	96968024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96932808_96935118_96935400_96935865_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957
ENSMUSG00000109561.2_96932653_96968072_1	chr13	+	1155	8	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	408	61537	408	-61537	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGTATGTATGTGAACAT	NA	NA	NA	NA	NA	NA	NA	NA	96932652	96968072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96932808_96935118_96935400_96935865_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957
ENSMUSG00000109561.2_96932716_96968144_1	chr13	+	1164	8	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	471	61465	471	-61465	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAATAGCCGAACTAAT	NA	NA	NA	NA	NA	NA	NA	NA	96932715	96968144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96932808_96935118_96935400_96935865_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957
ENSMUSG00000109561.2_96935153_96968264_1	chr13	+	1158	7	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	2908	61345	2908	-61345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAACGAATAAATTACTC	NA	NA	NA	NA	NA	NA	NA	NA	96935152	96968264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96935400_96935865_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957
ENSMUSG00000109561.2_96935222_96968378_1	chr13	+	1203	7	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	2977	61231	2977	-61231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTTATAATGAGGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	96935221	96968378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96935400_96935865_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957
ENSMUSG00000109561.2_96935303_96968417_1	chr13	+	1161	7	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	3058	61192	3058	-61192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCATGTCCTGGATTCA	NA	NA	NA	NA	NA	NA	NA	NA	96935302	96968417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96935400_96935865_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957
ENSMUSG00000109561.2_96935904_96968559_1	chr13	+	1168	6	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	3659	61050	3659	-61050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCAATATAGTAGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	96935903	96968559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957
ENSMUSG00000109561.2_96940663_96968682_1	chr13	+	1175	5	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	8418	60927	8418	-60927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGATTGCCACACCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	96940662	96968682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957
ENSMUSG00000109561.2_96957918_96968887_1	chr13	+	1175	4	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	25673	60722	25673	-60722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAATTTCTGTACAACA	NA	NA	NA	NA	NA	NA	NA	NA	96957917	96968887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96957965_96962605_96962751_96967062_96967116_96967957
ENSMUSG00000109561.2_96962692_96969017_1	chr13	+	1172	3	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	30447	60592	30447	-60592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTGACTGTTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	96962691	96969017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96962751_96967062_96967116_96967957
ENSMUSG00000109561.2_96968258_96970155_1	chr13	+	1163	2	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	36013	59454	36013	-59454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAGGAGAAAAAGAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	96968257	96970155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96969369_96970103
ENSMUSG00000109561.2_96968689_97002877_1	chr13	+	1171	5	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	36444	26732	36444	-26732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAGATCAGAAACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	96968688	97002877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96969369_96970103_96970275_96988163_96988302_96989108_96989252_97002838
ENSMUSG00000109561.2_96969190_97014714_1	chr13	+	1157	9	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	36945	14895	36945	-14895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAAAGAGTCTTTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	96969189	97014714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96969369_96970103_96970275_96988163_96988302_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652
ENSMUSG00000109561.2_96970139_97014955_1	chr13	+	1184	8	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	37894	14654	37894	-14654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTGAAATAGAGAGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	96970138	97014955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96970275_96988163_96988302_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652
ENSMUSG00000109561.2_96970205_97015006_1	chr13	+	1169	8	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	37960	14603	37960	-14603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAATAAGAAGAGAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	96970204	97015006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96970275_96988163_96988302_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652
ENSMUSG00000109561.2_96988231_97015139_1	chr13	+	1165	7	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	55986	14470	55986	-14470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTCTTACTCCTCACGC	NA	NA	NA	NA	NA	NA	NA	NA	96988230	97015139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96988302_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652
ENSMUSG00000109561.2_96989208_97015319_1	chr13	+	1175	6	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	56963	14290	56963	-14290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAGAAACAAGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	96989207	97015319	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652
ENSMUSG00000109561.2_97010451_97029570_1	chr13	+	1176	3	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	78206	39	78206	-39	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGTTATGTGACCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	97010450	97029570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_97010544_97014652_97015632_97029466
ENSMUSG00000109561.2_97010527_97029597_1	chr13	+	1127	3	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	78282	12	78282	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAATACGGTGAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	97010526	97029597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_+_97010544_97014652_97015632_97029466
ENSMUSG00000109783.2_23339093_23378830_1	chr16	+	1022	5	FSM	ENSMUSG00000109783.2	ENSMUST00000211460.2	1155	5	133	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGGTGTTTACCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	23339092	23378830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_23339225_23346244_23346357_23353329_23353550_23362372_23362622_23378521
ENSMUSG00000109783.2_23353470_23378830_1	chr16	+	625	3	ISM	ENSMUSG00000109783.2	ENSMUST00000210371.2	1009	5	14377	0	14315	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGGTGTTTACCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	23353469	23378830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_23353550_23373447_23373684_23378521
ENSMUSG00000109865.2_3489887_3497666_1	chr2	-	847	6	ISM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	16185	0	16185	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGAGTCTTTGTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	3497666	3489886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600
ENSMUSG00000109865.2_3490013_3499155_1	chr2	-	908	7	ISM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	14696	126	14696	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGTTTTTAGAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	3499155	3490012	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058
ENSMUSG00000109865.2_3491995_3500348_1	chr2	-	892	6	ISM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	13503	2108	13503	-2108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGGCCAAGTTTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	3500348	3491994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243
ENSMUSG00000109865.2_3492105_3502124_1	chr2	-	822	7	ISM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	11727	2218	11727	-2218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGGGACCCCGCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	3502124	3492104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084
ENSMUSG00000109865.2_3492738_3512088_1	chr2	-	842	9	ISM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	1763	2851	1763	-2851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGCAGCAGCTGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	3512088	3492737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051
ENSMUSG00000109865.2_3495584_3512232_1	chr2	-	828	9	ISM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	1619	5697	1619	-5697	internal_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGAGCTCTTGCGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	3512232	3495583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210
ENSMUSG00000109865.2_3497701_3513780_1	chr2	-	843	9	ISM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	71	7814	71	-7814	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCTGAAGTGGCCAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	3513780	3497700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ENSMUSG00000110195.2_101070898_101156426_1	chr7	+	1726	17	ISM	ENSMUSG00000110195.2	ENST00000418754.6	2843	27	-21	4611	0	-4611	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGGCCCTTCCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	101070897	101156426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101071203_101100608_101100676_101149594_101149655_101150183_101150326_101150816_101150870_101151060_101151136_101151220_101151263_101151740_101151810_101152018_101152150_101152505_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302
ENSMUSG00000110195.2_101071053_101157269_1	chr7	+	1697	19	ISM	ENSMUSG00000110195.2	ENST00000418754.6	2843	27	134	3768	134	-3768	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTTCTCTGTCTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	101071052	101157269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101071203_101100608_101100676_101149594_101149655_101150183_101150326_101150816_101150870_101151060_101151136_101151220_101151263_101151740_101151810_101152018_101152150_101152505_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213
ENSMUSG00000110195.2_101100523_101157736_1	chr7	+	1788	19	ISM	ENSMUSG00000110195.2	ENST00000418754.6	2843	27	29604	3301	21	-3301	internal_fragment	TRUE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAGCCTGCCCTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	101100522	101157736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101100676_101149594_101149655_101150183_101150326_101150816_101150870_101151060_101151136_101151220_101151263_101151740_101151810_101152018_101152150_101152505_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648
ENSMUSG00000110195.2_101149592_101157946_1	chr7	+	1686	19	ISM	ENSMUSG00000110195.2	ENSMUST00000209537.2	4100	31	49865	4078	49090	-3091	internal_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCCATCCTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	101149591	101157946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101149655_101150183_101150326_101150816_101150870_101151060_101151136_101151220_101151263_101151740_101151810_101152018_101152150_101152505_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898
ENSMUSG00000110195.2_101150252_101159207_1	chr7	+	1696	20	ISM	ENSMUSG00000110195.2	ENSMUST00000209537.2	4100	31	50525	2817	49750	-1830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATCTTCAAGGACCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	101150251	101159207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101150326_101150816_101150870_101151060_101151136_101151220_101151263_101151740_101151810_101152018_101152150_101152505_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898_101157947_101158923_101158999_101159141
ENSMUSG00000110195.2_101151061_101159625_1	chr7	+	1716	19	ISM	ENSMUSG00000110195.2	ENSMUST00000209537.2	4100	31	51334	2399	50559	-1412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACCAGCCCTCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	101151060	101159625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101151136_101151220_101151263_101151740_101151810_101152018_101152150_101152505_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898_101157947_101158923_101158999_101159141_101159242_101159512
ENSMUSG00000110195.2_101151219_101160174_1	chr7	+	1682	19	ISM	ENSMUSG00000110195.2	ENSMUST00000209537.2	4100	31	51492	1850	50717	-863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTCCCGTGGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	101151218	101160174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101151263_101151740_101151810_101152018_101152150_101152505_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898_101157947_101158923_101158999_101159141_101159242_101159512_101159626_101160135
ENSMUSG00000110195.2_101151753_101160346_1	chr7	+	1652	19	ISM	ENSMUSG00000110195.2	ENSMUST00000209537.2	4100	31	52026	1678	51251	-691	internal_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGATGATGGACCGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	101151752	101160346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101151810_101152018_101152150_101152505_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898_101157947_101158923_101158999_101159141_101159242_101159512_101159626_101160135_101160175_101160320
ENSMUSG00000110195.2_101152101_101160715_1	chr7	+	1647	19	ISM	ENSMUSG00000110195.2	ENSMUST00000209537.2	4100	31	52374	1309	51599	-322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCGTGAGCACTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	101152100	101160715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101152150_101152505_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898_101157947_101158923_101158999_101159141_101159242_101159512_101159626_101160135_101160175_101160320_101160428_101160662
ENSMUSG00000110195.2_101152589_101160874_1	chr7	+	1674	18	ISM	ENSMUSG00000110195.2	ENST00000376450.7	3260	21	52087	1150	52087	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTCTAGGGACCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	101152588	101160874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898_101157947_101158923_101158999_101159141_101159242_101159512_101159626_101160135_101160175_101160320_101160428_101160662
ENSMUSG00000110206.2_44776443_44783399_1	chr7	-	492	5	ISM	ENSMUSG00000089989.11	ENSMUST00000209467.2	1477	13	2256	1097	2256	-1097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCATTTTCTGGCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	44783399	44776442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44776517_44776632_44776699_44776919_44776993_44781651_44781837_44783305
ENSMUSG00000110206.2_44780612_44785480_1	chr7	-	994	8	ISM	ENSMUSG00000110206.2	ENSMUST00000146760.7	1075	9	376	-1	0	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGCGTGCCTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	44785480	44780611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_44780856_44781492_44781562_44781651_44781837_44783305_44783451_44783796_44783941_44784545_44784600_44785087_44785202_44785441
ENSMUSG00000110277.3_90607117_90610646_1	chr18	+	1843	3	ISM	ENSMUSG00000110277.3	ENSMUST00000211710.2	2003	4	9216	0	9197	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAAGTGTTGTCTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	90607116	90610646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_90607207_90607397_90607459_90608954
ENSMUSG00000110340.2_104070615_104073970_1	chr8	-	349	2	ISM	ENSMUSG00000110340.2	ENSMUST00000209501.2	489	3	196	105	196	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAGGAGAGTATATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	104073970	104070614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_-_104070793_104073799
ENSMUSG00000110386.2_85852501_85858308_1	chr8	-	1275	2	FSM	ENSMUSG00000110386.2	ENSMUST00000209823.2	1885	2	610	0	610	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCGGGGGTCTTTCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	85858308	85852500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85853704_85858236
ENSMUSG00000110386.2_85853006_85858705_1	chr8	-	1167	2	FSM	ENSMUSG00000110386.2	ENSMUST00000209823.2	1885	2	213	505	213	-505	multi-exon	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGCATGAAAAAGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	85858705	85853005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85853704_85858236
ENSMUSG00000110537.2_123891994_123898242_1	chr8	+	971	2	FSM	ENSMUSG00000110537.2	ENSMUST00000212411.2	2617	2	0	1646	0	-1646	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTGGTCAAGCACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	123891993	123898242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123892257_123897534
ENSMUSG00000110537.2_123892116_123898310_1	chr8	+	917	2	FSM	ENSMUSG00000110537.2	ENSMUST00000212411.2	2617	2	122	1578	122	-1578	multi-exon	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACAGACACAGAAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	123892115	123898310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123892257_123897534
ENSMUSG00000110537.2_123892179_123898351_1	chr8	+	895	2	FSM	ENSMUSG00000110537.2	ENSMUST00000212411.2	2617	2	185	1537	185	-1537	multi-exon	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGCTTCACTGATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	123892178	123898351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123892257_123897534
ENSMUSG00000110537.2_123899584_123904840_1	chr8	+	451	2	FSM	ENSMUSG00000110537.2	ENSMUST00000212490.2	1115	2	0	664	0	-664	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATATCACACCTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	123899583	123904840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123899783_123904588
ENSMUSG00000110537.2_123899711_123904950_1	chr8	+	434	2	FSM	ENSMUSG00000110537.2	ENSMUST00000212490.2	1115	2	127	554	127	-554	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTACGCAGGCACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	123899710	123904950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123899783_123904588
ENSMUSG00000110847.2_91094380_91095226_1	chr10	-	676	2	FSM	ENSMUSG00000110847.2	ENST00000312179.10	676	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGTTCCTGGTGAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	91095226	91094379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_91094779_91094949
ENSMUSG00000110847.2_91094380_91095658_2	chr10	-	956	2	FSM	ENSMUSG00000110847.2	ENST00000611884.5	1014	2	58	0	58	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGTTCCTGGTGAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	91095658	91094379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_91095227_91095549
ENSMUSG00000110847.2_91094380_91095658_3	chr10	-	945	2	NNC	ENSMUSG00000110847.2	novel	1014	2	NA	NA	58	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	5884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGTTCCTGGTGAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	91095658	91094379	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_-_91095227_91095560
ENSMUSG00000111497.2_20979125_20984614_1	chr9	-	347	4	ISM	ENSMUSG00000079677.3	ENST00000494368.5	451	5	203	65	203	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTCCCAAGATCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	20984614	20979124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559
ENSMUSG00000111497.2_20979325_20984818_1	chr9	-	291	4	ISM	ENSMUSG00000079677.3	ENST00000494368.5	451	5	-1	265	-1	-265	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGGCAGCCCCCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	20984818	20979324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_-_20979414_20984370_20984478_20984559_20984615_20984778
ENSMUSG00000111503.2_11517014_11584728_1	chr9	-	412	2	FSM	ENSMUSG00000111503.2	ENSMUST00000214628.2	681	2	122	147	122	-147	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTCTGGCTGATCATG	NA	NA	NA	NA	NA	NA	NA	NA	11584728	11517013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_11517350_11584652
ENSMUSG00000111709.2_78169762_78176262_1	chr9	+	374	4	ISM	ENSMUSG00000111709.2	ENSMUST00000217203.2	874	7	5351	186	5351	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGCCTGGCAGCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	78169761	78176262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_78169817_78173249_78173392_78175291_78175424_78176217
ENSMUSG00000112117.3_91907099_91970256_1	chr10	-	1076	6	NIC	ENSMUSG00000112117.3	novel	1882	12	NA	NA	1898	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAGGAAAAACACCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	91970256	91907098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_-_91907161_91911031_91911275_91911374_91911536_91919583_91919836_91939567_91939773_91970103
ENSMUSG00000112117.3_91911223_91971670_1	chr10	-	1038	7	ISM	ENSMUSG00000112117.3	ENST00000665975.1	1882	12	29504	4124	484	-238	internal_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCTTAGACAAAGGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	91971670	91911222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_91911275_91911374_91911533_91919583_91919836_91939567_91939773_91970103_91970255_91970825_91970938_91971562
ENSMUSG00000112117.3_91911353_91972451_1	chr10	-	1077	7	ISM	ENSMUSG00000112117.3	ENST00000665975.1	1882	12	28723	4254	-297	-368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGCGTGTTACAGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	91972451	91911352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_91911533_91919583_91919836_91939567_91939773_91970103_91970255_91970825_91970938_91971562_91971707_91972418
ENSMUSG00000112117.3_91911484_91972476_1	chr10	-	971	7	ISM	ENSMUSG00000112117.3	ENST00000665975.1	1882	12	28698	4385	-322	-499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAACCTCAGATGTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	91972476	91911483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_91911533_91919583_91919836_91939567_91939773_91970103_91970255_91970825_91970938_91971562_91971707_91972418
ENSMUSG00000112117.3_91919583_91998028_1	chr10	-	1061	7	ISM	ENSMUSG00000112117.3	ENST00000665975.1	1882	12	3146	12484	974	166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGCTTCTCTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	91998028	91919582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_91919836_91939567_91939773_91970103_91970255_91970825_91970938_91971562_91971707_91972418_91972553_91997966
ENSMUSG00000112117.3_91919749_92000635_1	chr10	-	1040	8	ISM	ENSMUSG00000112117.3	ENST00000665975.1	1882	12	539	12650	-25	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGACAGCCAGGTACACA	NA	NA	NA	NA	NA	NA	NA	NA	92000635	91919748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_91919836_91939567_91939773_91970103_91970255_91970825_91970938_91971562_91971707_91972418_91972553_91997966_91998027_92000488
ENSMUSG00000112117.3_91939569_92001029_1	chr10	-	1021	8	ISM	ENSMUSG00000112117.3	ENST00000665975.1	1882	12	145	32470	0	-19820	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGTTTTCTTTATACTT	NA	NA	NA	NA	NA	NA	NA	NA	92001029	91939568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_91939773_91970103_91970255_91970825_91970938_91971562_91971707_91972418_91972553_91997966_91998027_92000488_92000635_92000959
ENSMUSG00000112117.3_91970132_92001157_1	chr10	-	917	7	ISM	ENSMUSG00000112117.3	ENST00000665975.1	1882	12	17	63033	17	719	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTTTGGATTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	92001157	91970131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_-_91970255_91970825_91970938_91971562_91971707_91972418_91972553_91997966_91998027_92000488_92000635_92000959
ENSMUSG00000112218.2_32760267_32762531_1	chr12	+	1101	2	FSM	ENSMUSG00000112218.2	ENST00000605309.1	1098	2	0	-3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGCCCTAGTCCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	32760266	32762531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_32760940_32762103
ENSMUSG00000112449.2_55127297_55235112_1	chr12	+	2058	15	Fusion	ENSMUSG00000073079.7_ENSMUSG00000112449.2	novel	2061	15	NA	NA	3	-1246	multi-exon	FALSE	canonical	NA	NA	NA	NA	2293	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATAAGTTAAAGGGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	55127296	55235112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	Fusion_chr12_+_55127522_55211014_55211125_55211980_55212068_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
ENSMUSG00000112449.2_55202046_55213148_1	chr12	+	577	4	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	157	23210	157	-23210	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATGCTGTATTTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	55202045	55213148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093
ENSMUSG00000112449.2_55202094_55217686_1	chr12	+	375	5	NNC	ENSMUSG00000112449.2	novel	3646	16	NA	NA	205	-18672	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACCGACTAAGGGAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	55202093	55217686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_55202155_55211014_55211125_55211980_55212073_55213093_55213179_55217659
ENSMUSG00000112449.2_55202155_55219020_1	chr12	+	670	6	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	266	17338	266	-17338	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTGTGTTGAAATTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	55202154	55219020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953
ENSMUSG00000112449.2_55202319_55221771_1	chr12	+	578	8	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	430	14587	430	-14587	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTCATCATTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	55202318	55221771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757
ENSMUSG00000112449.2_55211069_55221908_1	chr12	+	614	7	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	9180	14450	9180	-14450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGCTTTCCATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	55211068	55221908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757
ENSMUSG00000112449.2_55211069_55224401_1	chr12	+	776	8	NIC	ENSMUSG00000112449.2	novel	3646	16	NA	NA	9180	-11957	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTAGCAAAATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	55211068	55224401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr12_+_55211125_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312
ENSMUSG00000112449.2_55221800_55235262_1	chr12	+	1514	9	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	19911	1096	19911	-1096	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1068	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACTTTATTCCAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	55221799	55235262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
ENSMUSG00000112449.2_55227461_55235112_1	chr12	+	845	4	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	25572	1246	25572	-1246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATAAGTTAAAGGGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	55227460	55235112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_55227571_55230346_55230518_55232930_55233027_55234644
ENSMUSG00000112627.2_116790540_116798185_1	chr10	+	472	3	ISM	ENSMUSG00000112627.2	ENSMUST00000217853.2	1698	4	4047	999	4047	-999	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGCAAGACTTATCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	116790539	116798185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_116790631_116791432_116791563_116797934
ENSMUSG00000112639.2_126906742_126910665_1	chr10	+	1272	2	FSM	ENSMUSG00000112639.2	ENSMUST00000217956.2	1770	2	498	0	498	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTGTCTTCAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	126906741	126910665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_126907477_126910128
ENSMUSG00000112907.2_79250911_79253739_1	chr10	-	594	2	FSM	ENSMUSG00000112907.2	ENSMUST00000217947.2	2709	2	0	2115	0	-2115	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAAAATAGAACCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	79253739	79250910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_79251194_79253428
ENSMUSG00000113491.2_70027893_70028665_1	chr12	+	655	2	FSM	ENSMUSG00000113491.2	ENST00000513176.2	1246	2	11	580	11	-577	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGAGGGCATCTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	70027892	70028665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_70027964_70028081
ENSMUSG00000113491.2_70027970_70028693_1	chr12	+	653	2	Genic_Genomic	ENSMUSG00000113491.2	novel	1477	2	NA	NA	88	-549	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATTCTAAACTGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	70027969	70028693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	Genic_Genomic_chr12_+_70028018_70028088
ENSMUSG00000113640.2_80438736_80443288_1	chr10	+	1189	2	FSM	ENSMUSG00000113640.2	ENSMUST00000038411.5	1411	2	22	200	22	-200	multi-exon	TRUE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCCTCTGTGATGATAC	NA	NA	NA	NA	NA	NA	NA	NA	80438735	80443288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80438784_80442147
ENSMUSG00000113796.2_70827442_70829524_1	chr13	-	813	2	ISM	ENSMUSG00000113796.2	ENSMUST00000222903.2	1795	3	561	2607	561	-2607	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTGCCTCACAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	70829524	70827441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_70827494_70828763
ENSMUSG00000113909.2_70799344_70803185_1	chr13	-	387	2	ISM	ENSMUSG00000113909.2	ENSMUST00000220833.2	757	3	721	220	721	-220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCAGTTGCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	70803185	70799343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_70799684_70803138
ENSMUSG00000113949.2_80438714_80451618_1	chr10	+	1799	7	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80438713	80451618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448288_80450437
ENSMUSG00000113949.2_80438714_80451618_2	chr10	+	1797	7	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80438713	80451618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450445
ENSMUSG00000113949.2_80438714_80451618_3	chr10	+	1800	7	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80438713	80451618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80438784_80444636_80444685_80445168_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ENSMUSG00000113949.2_80438714_80451618_4	chr10	+	1796	7	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80438713	80451618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_80438775_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ENSMUSG00000114278.3_123650530_123662703_1	chr5	-	1151	5	FSM	ENSMUSG00000029433.17	ENST00000443649.9	1174	5	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGATGGTATCCACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	123662703	123650529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123662133
ENSMUSG00000114278.3_123650530_123662703_2	chr5	-	1145	5	NNC	ENSMUSG00000029433.17	novel	1174	5	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGATGGTATCCACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	123662703	123650529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_123650771_123655799_123655897_123656023_123656129_123658103_123658236_123662133
ENSMUSG00000114278.3_123650530_123662703_3	chr5	-	1145	5	NNC	ENSMUSG00000029433.17	novel	1174	5	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGATGGTATCCACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	123662703	123650529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_123650765_123655799_123655897_123656017_123656129_123658103_123658236_123662133
ENSMUSG00000114278.3_123650530_123662703_4	chr5	-	1145	5	NNC	ENSMUSG00000029433.17	novel	1174	5	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGATGGTATCCACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	123662703	123650529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123662139
ENSMUSG00000114942.2_57933705_57937074_1	chr14	-	998	3	ISM	ENSMUSG00000021959.17	ENSMUST00000173990.8	3834	7	46488	2704	34683	-2704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGTCGCTGTGGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	57937074	57933704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_57933760_57934372_57934956_57936714
ENSMUSG00000115219.3_20430375_20437619_1	chr16	+	960	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	32	142	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCTGGCTTCTAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	20430374	20437619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_20430571_20436375_20436660_20437139
ENSMUSG00000115219.3_20436374_20437761_1	chr16	+	908	2	ISM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	6031	0	6023	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTGCTTTATGCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	20436373	20437761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20436660_20437139
ENSMUSG00000115317.2_32779050_32795507_1	chr15	+	689	4	FSM	ENSMUSG00000115317.2	ENSMUST00000147013.3	1334	4	0	645	0	-645	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAGTCTTAAAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	32779049	32795507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_32779331_32779456_32779577_32793709_32793757_32795266
ENSMUSG00000115317.2_32779241_32795657_1	chr15	+	648	4	FSM	ENSMUSG00000115317.2	ENSMUST00000147013.3	1334	4	191	495	191	-495	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCCCTAAGATAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	32779240	32795657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_32779331_32779456_32779577_32793709_32793757_32795266
ENSMUSG00000115317.2_32793712_32795835_1	chr15	+	614	2	ISM	ENSMUSG00000115317.2	ENSMUST00000147013.3	1334	4	14662	317	14662	-317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACAGTATTACATTATTC	NA	NA	NA	NA	NA	NA	NA	NA	32793711	32795835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_32793757_32795266
ENSMUSG00000115338.3_51181963_51189897_1	chr14	+	1766	6	FSM	ENSMUSG00000115338.3	ENSMUST00000048615.13	2942	6	204	972	0	-972	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGGTTCACACTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	51181962	51189897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_51182051_51185308_51185479_51187714_51187819_51187999_51188176_51188288_51188480_51188860
ENSMUSG00000115338.3_51187713_51190070_1	chr14	+	1683	4	ISM	ENSMUSG00000115338.3	ENSMUST00000048615.13	2942	6	5954	799	5750	-799	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAGGAAGACACATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	51187712	51190070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_51187819_51187999_51188176_51188288_51188480_51188860
ENSMUSG00000115338.3_51187726_51190173_1	chr14	+	1773	4	ISM	ENSMUSG00000115338.3	ENSMUST00000048615.13	2942	6	5967	696	5763	-696	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACATGGAGGAAGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	51187725	51190173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_51187819_51187999_51188176_51188288_51188480_51188860
ENSMUSG00000115338.3_51187800_51190220_1	chr14	+	1746	4	ISM	ENSMUSG00000115338.3	ENSMUST00000048615.13	2942	6	6041	649	5837	-649	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGCTAGCAAGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	51187799	51190220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_51187819_51187999_51188176_51188288_51188480_51188860
ENSMUSG00000115338.3_51188123_51190369_1	chr14	+	1753	3	ISM	ENSMUSG00000115338.3	ENSMUST00000048615.13	2942	6	6364	500	6160	-500	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTATGAGGGTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	51188122	51190369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_51188176_51188288_51188480_51188860
ENSMUSG00000115338.3_51188335_51190471_1	chr14	+	1756	2	ISM	ENSMUSG00000115338.3	ENSMUST00000048615.13	2942	6	6576	398	6372	-398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAGACTGCAGCTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	51188334	51190471	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_51188480_51188860
ENSMUSG00000115338.3_51188390_51190538_1	chr14	+	1768	2	ISM	ENSMUSG00000115338.3	ENSMUST00000048615.13	2942	6	6631	331	6427	-331	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAAGATTTGCCCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	51188389	51190538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_51188480_51188860
ENSMUSG00000115483.2_43157299_43163468_1	chr14	+	1449	3	ISM	ENSMUSG00000115483.2	ENSMUST00000228117.2	1466	4	970	-7	970	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGCTCTAGAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	43157298	43163468	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_43157435_43158114_43158297_43162337
ENSMUSG00000115987.2_76506309_76507694_1	chr15	-	590	5	NNC	ENSMUSG00000115987.2	novel	941	10	NA	NA	1128	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	NA	NA	NA	NA	NA	NA	NA	NA	76507694	76506308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_76506551_76506670_76506763_76506854_76506909_76507376_76507473_76507588
ENSMUSG00000115987.2_76506309_76507694_2	chr15	-	590	5	NNC	ENSMUSG00000115987.2	novel	941	10	NA	NA	1128	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	NA	NA	NA	NA	NA	NA	NA	NA	76507694	76506308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_76506551_76506670_76506757_76506854_76506909_76507370_76507473_76507588
ENSMUSG00000115987.2_76506309_76507694_3	chr15	-	589	5	NNC	ENSMUSG00000115987.2	novel	941	10	NA	NA	1128	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	NA	NA	NA	NA	NA	NA	NA	NA	76507694	76506308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_76506544_76506670_76506763_76506854_76506909_76507370_76507473_76507588
ENSMUSG00000115987.2_76506309_76508375_1	chr15	-	686	6	ISM	ENSMUSG00000115987.2	ENSMUST00000229019.2	941	10	1831	0	447	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	NA	NA	NA	NA	NA	NA	NA	NA	76508375	76506308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285
ENSMUSG00000115987.2_76506309_76508828_1	chr15	-	761	8	ISM	ENSMUSG00000115987.2	ENSMUST00000229019.2	941	10	1378	0	-6	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	NA	NA	NA	NA	NA	NA	NA	NA	76508828	76506308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791
ENSMUSG00000115987.2_76506430_76508828_1	chr15	-	760	7	FSM	ENSMUSG00000115987.2	ENST00000377348.6	754	7	-6	0	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACCGAGACAGGAATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	76508828	76506429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791
ENSMUSG00000115987.2_76506507_76509353_1	chr15	-	575	9	ISM	ENSMUSG00000115987.2	ENSMUST00000078803.5	911	10	921	198	-531	-77	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCAAGTTCGCCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	76509353	76506506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508821_76509333
ENSMUSG00000115987.2_76506670_76510206_1	chr15	-	578	8	NNC	ENSMUSG00000115987.2	novel	941	10	NA	NA	0	-240	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCTCTCCCGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	76510206	76506669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76509328_76509406_76510188
ENSMUSG00000115987.2_76506670_76510206_2	chr15	-	602	9	ISM	ENSMUSG00000115987.2	ENSMUST00000078803.5	911	10	68	361	0	-240	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCTCTCCCGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	76510206	76506669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188
ENSMUSG00000116048.2_93406715_93437455_1	chr1	+	3210	12	NNC	ENSMUSG00000116048.2	novel	3192	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	93406714	93437455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_93406809_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUSG00000116048.2_93406715_93437455_2	chr1	+	3187	12	NNC	ENSMUSG00000116048.2	novel	3192	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	93406714	93437455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_93406791_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429233_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUSG00000116048.2_93406715_93437455_3	chr1	+	3187	12	NNC	ENSMUSG00000116048.2	novel	3192	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	93406714	93437455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_93406791_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433270_93433324_93434684_93434805_93435434
ENSMUSG00000116048.2_93406715_93437455_4	chr1	+	3185	12	NNC	ENSMUSG00000116048.2	novel	3192	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	93406714	93437455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_93406791_93418878_93419000_93423300_93423388_93425062_93425187_93426740_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUSG00000116048.2_93406743_93436491_1	chr1	+	2227	13	FSM	ENSMUSG00000116048.2	ENSMUST00000179353.8	3219	13	28	964	28	-964	multi-exon	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTGATTGGGTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	93406742	93436491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_93406791_93416849_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUSG00000116048.2_93406830_93423358_1	chr1	+	283	4	ISM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	47	14097	47	-14097	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGAAAGAATTATTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	93406829	93423358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_93406903_93416845_93416877_93418878_93419000_93423300
ENSMUSG00000116138.2_76605883_76607909_1	chr15	-	1405	3	FSM	ENSMUSG00000116138.2	ENSMUST00000036247.10	1754	3	131	218	131	-218	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCCTAATGCACAGATCA	NA	NA	NA	NA	NA	NA	NA	NA	76607909	76605882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76607184_76607370_76607420_76607854
ENSMUSG00000116138.2_76605900_76608024_1	chr15	-	1503	3	FSM	ENSMUSG00000116138.2	ENSMUST00000036247.10	1754	3	16	235	16	-235	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAAGCAGCAGCTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	76608024	76605899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76607184_76607370_76607420_76607854
ENSMUSG00000116165.2_78798491_78802424_1	chr15	+	336	2	FSM	ENSMUSG00000116165.2	ENSMUST00000089378.5	2001	2	372	1293	372	-1293	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACTTCAGCGTGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	78798490	78802424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_78798732_78802329
ENSMUSG00000116295.2_97055066_97065103_1	chr15	-	417	4	FSM	ENSMUSG00000116295.2	ENSMUST00000229245.2	593	4	20	156	20	-156	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGCTCAGTGGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	97065103	97055065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_97055131_97059094_97059277_97064383_97064508_97065057
ENSMUSG00000116305.2_85567463_85591604_1	chr15	+	1220	6	ISM	ENSMUSG00000116305.2	ENSMUST00000230913.2	1411	7	29646	121	-23328	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGCCCAGGGACACAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	85567462	85591604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85567516_85577737_85577820_85579115_85579182_85585107_85585222_85588436_85588492_85590754
ENSMUSG00000116305.2_85585109_85591725_1	chr15	+	1139	3	ISM	ENSMUSG00000116305.2	ENSMUST00000230913.2	1411	7	47292	0	-5682	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGGTCTTTGGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	85585108	85591725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_85585222_85588436_85588492_85590754
ENSMUSG00000116307.2_78415414_78416997_1	chr15	+	370	2	FSM	ENSMUSG00000116307.2	ENSMUST00000230340.2	475	2	105	0	105	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGAGGACATTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	78415413	78416997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_78415610_78416823
ENSMUSG00000116358.2_98849151_98851432_1	chr15	-	416	3	ISM	ENSMUSG00000072235.7	ENST00000679733.1	1701	4	-2	1460	-2	-1432	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCCAATAACTATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	98851432	98849150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_98849218_98849324_98849573_98851331
ENSMUSG00000116378.2_78915101_78920974_1	chr15	+	1032	8	ISM	ENSMUSG00000116378.2	ENSMUST00000171999.9	1736	9	0	5757	0	-5757	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTTTACTGTCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	78915100	78920974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952
ENSMUSG00000116564.2_17594685_17605226_1	chr17	+	850	6	ISM	ENSMUSG00000116564.2	ENSMUST00000232396.2	1596	8	-149	2790	114	-2790	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATTCATGGAGATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	17594684	17605226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145
ENSMUSG00000116564.2_17594834_17605924_1	chr17	+	894	7	ISM	ENSMUSG00000116564.2	ENSMUST00000232396.2	1596	8	0	2092	0	-2092	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATATCAGGTCTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	17594833	17605924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842
ENSMUSG00000116564.2_17598037_17607393_1	chr17	+	818	7	ISM	ENSMUSG00000116564.2	ENSMUST00000232396.2	1596	8	3203	623	3203	-623	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGCTACATCCAGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	17598036	17607393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325
ENSMUSG00000116564.2_17601174_17607693_1	chr17	+	818	5	ISM	ENSMUSG00000116564.2	ENSMUST00000232396.2	1596	8	6340	323	6340	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTCTCTGAGGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	17601173	17607693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325
ENSMUSG00000116564.2_17605197_17610289_1	chr17	+	804	4	ISM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	10626	4872	10363	2273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGGCAGTGCCCTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	17605196	17610289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_17605338_17605842_17605936_17607325_17607836_17610229
ENSMUSG00000116564.2_17605872_17613865_1	chr17	+	820	4	ISM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	11301	1296	11038	-1296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGGGGAGACTAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	17605871	17613865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_17605936_17607325_17607836_17610229_17610327_17613716
ENSMUSG00000116564.2_17607403_17614019_1	chr17	+	833	3	ISM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	12832	1142	12569	-1142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATCTGCCAAGCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	17607402	17614019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_17607836_17610229_17610327_17613716
ENSMUSG00000116564.2_17607480_17614099_1	chr17	+	836	3	ISM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	12909	1062	12646	-1062	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGGCAGTAATTGCAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	17607479	17614099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_17607836_17610229_17610327_17613716
ENSMUSG00000116656.2_90138834_90146425_1	chr16	-	780	2	FSM	ENSMUSG00000116656.2	ENSMUST00000231663.2	1236	2	105	351	105	-351	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGGGCCACAGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	90146425	90138833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_90139497_90146308
ENSMUSG00000116895.2_15231159_15240601_1	chr17	+	1040	9	NNC	ENSMUSG00000116895.2	novel	1055	9	NA	NA	16	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTATCCCCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	15231158	15240601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_15231304_15231898_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237544_15238346_15238462_15239227_15239331_15240488
ENSMUSG00000116895.2_15231217_15240601_1	chr17	+	977	9	NNC	ENSMUSG00000116895.2	novel	1055	9	NA	NA	74	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTATCCCCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	15231216	15240601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15240496
ENSMUSG00000116895.2_15231217_15240601_3	chr17	+	985	9	FSM	ENSMUSG00000116895.2	ENST00000418781.7	1055	9	74	-4	74	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTATCCCCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	15231216	15240601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15240488
ENSMUSG00000116895.2_15231231_15234796_1	chr17	+	679	5	NNC	ENSMUSG00000116895.2	novel	1055	9	NA	NA	88	-5801	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTCCCTCTGAATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	15231230	15234796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15234522
ENSMUSG00000116933.2_91723412_91723871_1	chr16	-	177	2	NNC	ENSMUSG00000116933.2	novel	530	4	NA	NA	-1	-242126	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	75	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTTTCCACCATCATG	NA	NA	NA	NA	NA	NA	NA	NA	91723871	91723411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_91723460_91723742
ENSMUSG00000116933.2_91723412_91723871_2	chr16	-	179	2	ISM	ENSMUSG00000116933.2	ENSMUST00000159295.8	530	4	-1	242126	-1	-242126	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTTTCCACCATCATG	NA	NA	NA	NA	NA	NA	NA	NA	91723871	91723411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_91723460_91723740
ENSMUSG00000116953.2_15199761_15203424_1	chr17	+	777	5	NNC	ENSMUSG00000116953.2	novel	1844	12	NA	NA	1031	-7743	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTCCCTCTGAATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	15199760	15203424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15203150
ENSMUSG00000116953.2_15199761_15209233_1	chr17	+	1069	9	NNC	ENSMUSG00000116953.2	novel	1844	12	NA	NA	1031	-1934	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTATCCCCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	15199760	15209233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15209120
ENSMUSG00000117183.2_22933280_22933788_1	chr17	-	256	2	NNC	ENSMUSG00000117183.2	novel	688	2	NA	NA	516	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAAATGTAGTAAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	22933788	22933279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_22933520_22933772
ENSMUSG00000117183.2_22933280_22933972_1	chr17	-	353	2	NNC	ENSMUSG00000117183.2	novel	688	2	NA	NA	332	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAAATGTAGTAAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	22933972	22933279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_22933520_22933859
ENSMUSG00000117183.2_22933280_22933972_2	chr17	-	356	2	FSM	ENSMUSG00000117183.2	ENST00000377073.4	688	2	332	0	332	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAAATGTAGTAAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	22933972	22933279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_22933520_22933856
ENSMUSG00000117310.3_30980151_30983081_1	chr1	-	2323	2	ISM	ENSMUSG00000026064.17	ENSMUST00000232841.2	4236	6	5309	768	5309	-768	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCCTGAGTTTAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	30983081	30980150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_30982405_30983012
ENSMUSG00000117310.3_30980348_30984111_1	chr1	-	2356	4	ISM	ENSMUSG00000026064.17	ENSMUST00000232841.2	4236	6	4279	965	4279	-965	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTCTATCTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	30984111	30980347	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018
ENSMUSG00000117310.3_30980900_30985720_1	chr1	-	2406	5	ISM	ENSMUSG00000026064.17	ENSMUST00000232841.2	4236	6	2670	1517	2670	-1517	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	851	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAAGGTCTAGATAATT	NA	NA	NA	NA	NA	NA	NA	NA	30985720	30980899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118
ENSMUSG00000117310.3_30981028_30988772_1	chr1	-	2421	6	FSM	ENSMUSG00000117310.3	ENSMUST00000027232.15	4129	6	64	1644	0	-367	multi-exon	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGTCACTGAGGACACTT	NA	NA	NA	NA	NA	NA	NA	NA	30988772	30981027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
ENSMUSG00000117310.3_30983690_30988772_1	chr1	-	896	4	ISM	ENSMUSG00000117310.3	ENSMUST00000027232.15	4129	6	64	4306	0	-3029	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGTGAAGATTAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	30988772	30983689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_30983748_30984018_30984112_30985118_30985721_30988629
ENSMUSG00000117338.2_27851253_27854196_2	chr17	-	419	4	ISM	ENSMUSG00000052146.17	ENSMUST00000155071.9	712	5	6	1310	6	-1310	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTATCTCCTCTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	27854196	27851252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_27851331_27853045_27853218_27853299_27853450_27854177
ENSMUSG00000117694.2_35686424_35705176_1	chr18	+	474	3	ISM	ENSMUSG00000117694.2	ENST00000509990.5	2932	16	8	18316	8	-15585	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTTAAGTATGCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	35686423	35705176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35686557_35690389_35690450_35704895
ENSMUSG00000117694.2_35690388_35705338_1	chr18	+	505	2	ISM	ENSMUSG00000117694.2	ENST00000509990.5	2932	16	3972	18154	3925	-15423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGGAAGTAGAGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	35690387	35705338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_35690450_35704895
ENSMUSG00000117789.2_5090754_5096215_1	chr19	+	963	3	ISM	ENSMUSG00000080268.5_ENSMUSG00000047379.8	ENSMUST00000116567.4	1388	10	-628	3730	-628	-3726	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGACCTGGAAAAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	5090753	5096215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5091519_5095920_5096067_5096163
ENSMUSG00000117789.2_5091046_5096915_1	chr19	+	991	6	ISM	ENSMUSG00000080268.5_ENSMUSG00000047379.8	ENSMUST00000116567.4	1388	10	-336	3030	-336	-3026	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGAGCCTTGACATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	5091045	5096915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842
ENSMUSG00000117789.2_5091149_5097492_1	chr19	+	985	7	ISM	ENSMUSG00000080268.5_ENSMUSG00000047379.8	ENSMUST00000116567.4	1388	10	-233	2453	-233	-2449	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGCACCGCTCGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	5091148	5097492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419
ENSMUSG00000117942.2_36781345_36788576_1	chr18	+	499	2	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	87708	2936	87601	-2936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAGGATCGAAAGATACC	NA	NA	NA	NA	NA	NA	NA	NA	36781344	36788576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36781794_36788526
ENSMUSG00000117942.2_36781375_36788664_1	chr18	+	557	2	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	87738	2848	87631	-2848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCAGTTTTGTTGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	36781374	36788664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36781794_36788526
ENSMUSG00000117942.2_36781518_36789776_1	chr18	+	518	3	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	87881	1736	87774	-1736	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCAATGCATCAACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	36781517	36789776	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr18_+_36781794_36788526_36788731_36789738
ENSMUSG00000117975.2_47883740_47907689_1	chr19	-	3012	2	FSM	ENSMUSG00000117975.2	ENSMUST00000095998.7	3760	2	49	699	47	-699	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTTCTTCGCCACATCT	NA	NA	NA	NA	NA	NA	NA	NA	47907689	47883739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_47886625_47907562
ENSMUSG00000117975.2_47883778_47907689_1	chr19	-	2974	2	FSM	ENSMUSG00000117975.2	ENSMUST00000095998.7	3760	2	49	737	47	-737	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCTTCTTTTCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	47907689	47883777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_47886625_47907562
ENSMUSG00000117975.2_47883849_47907726_1	chr19	-	2940	2	FSM	ENSMUSG00000117975.2	ENSMUST00000095998.7	3760	2	12	808	10	-808	multi-exon	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCCTGGTTACCCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	47907726	47883848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_47886625_47907562
ENSMUSG00000118125.2_5778115_5781300_1	chr19	-	2290	3	ISM	ENSMUSG00000118125.2	ENSMUST00000160852.8	2532	5	441	-1	343	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	5781300	5778114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5778897_5779264_5780741_5781268
ENSMUSG00000118125.2_5778334_5781503_1	chr19	-	2156	4	ISM	ENSMUSG00000118125.2	ENSMUST00000160852.8	2532	5	238	218	140	-218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTAGCTCTCATCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	5781503	5778333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5778897_5779264_5780741_5781268_5781354_5781471
ENSMUSG00000118125.2_5778387_5781539_1	chr19	-	2139	4	ISM	ENSMUSG00000118125.2	ENSMUST00000160852.8	2532	5	202	271	104	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGCCCAAAGCGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	5781539	5778386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5778897_5779264_5780741_5781268_5781354_5781471
ENSMUSG00000118125.2_5778443_5781655_1	chr19	-	2199	4	ISM	ENSMUSG00000118125.2	ENSMUST00000160852.8	2532	5	86	327	-12	-327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTCCACTTCTCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	5781655	5778442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5778897_5779264_5780741_5781268_5781354_5781471
ENSMUSG00000118125.2_5778460_5781728_1	chr19	-	2175	5	FSM	ENSMUSG00000118125.2	ENSMUST00000160852.8	2532	5	13	344	13	-344	multi-exon	FALSE	canonical	NA	NA	NA	NA	1545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCCAGTGTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	5781728	5778459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5778897_5779264_5780741_5781268_5781354_5781471_5781624_5781703
ENSMUSG00000118125.2_5779464_5781271_1	chr19	-	320	2	ISM	ENSMUSG00000118125.2	ENST00000527920.5	688	3	372	114	372	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGCTAGTGGGGGCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	5781271	5779463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_5779767_5781254
ENSMUSG00000118125.2_5779614_5781525_1	chr19	-	306	3	FSM	ENSMUSG00000118125.2	ENST00000527920.5	688	3	118	264	118	-264	multi-exon	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCGCTGAAAACGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	5781525	5779613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5779767_5781254_5781354_5781471
ENSMUSG00000118125.2_5779658_5781655_1	chr19	-	392	3	FSM	ENSMUSG00000118125.2	ENST00000527920.5	688	3	-12	308	-12	-308	multi-exon	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCCGGAGACCGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	5781655	5779657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5779767_5781254_5781354_5781471
ENSMUSG00000118125.2_5779713_5781655_1	chr19	-	337	3	FSM	ENSMUSG00000118125.2	ENST00000527920.5	688	3	-12	363	-12	-363	multi-exon	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCCTAGGAGTCGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	5781655	5779712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5779767_5781254_5781354_5781471
ENSMUSG00000118125.2_5780439_5781552_1	chr19	-	452	3	FSM	ENSMUSG00000079478.10	ENST00000526877.1	704	3	69	183	69	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCCGAGGCCCTAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	5781552	5780438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5780741_5781268_5781354_5781487
ENSMUSG00000118346.2_8750085_8751013_1	chr19	-	394	3	ISM	ENSMUSG00000118346.2	ENST00000533861.5	654	4	798	104	798	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGAGACAGATGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	8751013	8750084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_8750199_8750653_8750789_8750868
ENSMUSG00000118383.2_9807011_9814261_1	chr19	-	1949	2	FSM	ENSMUSG00000118383.2	ENSMUST00000236905.2	2697	2	0	748	0	-748	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTGCCATAGAGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	9814261	9807010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_9808776_9814077
ENSMUSG00000118491.2_12741280_12772528_2	chr19	-	1969	12	NNC	ENSMUSG00000118491.2	novel	2253	13	NA	NA	275	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCCAAGCAAATGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	12772528	12741279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_12741745_12742644_12742746_12747540_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12772327
ENSMUSG00000118491.2_12741280_12772528_3	chr19	-	1978	13	FSM	ENSMUSG00000118491.2	ENST00000389919.8	2253	13	275	0	275	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCCAAGCAAATGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	12772528	12741279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_12741745_12742644_12742746_12747540_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ENSMUSG00000118491.2_12741280_12772528_4	chr19	-	1973	13	NNC	ENSMUSG00000118491.2	novel	2253	13	NA	NA	275	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCCAAGCAAATGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	12772528	12741279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_12741745_12742644_12742746_12747540_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753822_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ENSMUSG00000118491.2_12741280_12772635_2	chr19	-	2085	13	FSM	ENSMUSG00000118491.2	ENST00000389919.8	2253	13	168	0	168	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCCAAGCAAATGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	12772635	12741279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_12741745_12742644_12742746_12747540_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ENSMUSG00000118491.2_12741456_12772714_1	chr19	-	1987	13	NNC	ENSMUSG00000118491.2	novel	2253	13	NA	NA	89	-176	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAAAAGAGGCTGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	12772714	12741455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_12741745_12742644_12742746_12747540_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753776_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ENSMUSG00000118505.2_87462221_87467883_1	chr3	+	1015	4	FSM	ENSMUSG00000118505.2	ENST00000454449.3	1013	4	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAAGGGGTGGCTCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	87462220	87467883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_87462456_87462655_87462843_87463265_87463378_87467402
ENSMUSG00000118505.2_87462221_87467883_2	chr3	+	1021	4	ISM	ENSMUSG00000118505.2	ENSMUST00000238853.2	2111	6	3665	533	0	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAAGGGGTGGCTCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	87462220	87467883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_87462456_87462655_87462843_87463265_87463384_87467402
ENSMUSG00000118505.2_87462221_87467883_3	chr3	+	1010	4	NNC	ENSMUSG00000118505.2	novel	1013	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAAGGGGTGGCTCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	87462220	87467883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_87462456_87462655_87462838_87463265_87463378_87467402
ENSMUSG00000118505.2_87462221_87467883_4	chr3	+	1014	4	NNC	ENSMUSG00000118505.2	novel	1013	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAAGGGGTGGCTCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	87462220	87467883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_87462456_87462655_87462843_87463265_87463378_87467403
ENSMUSG00000118661.1_141229537_141232200_1	chr7	-	766	5	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	6166	-1	6166	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGGACCTGTGTACCC	NA	NA	NA	NA	NA	NA	NA	NA	141232200	141229536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141229576_141230476_141230621_141230841_141230999_141231664_141231905_141232014
ENSMUSG00000118661.1_141230569_141232764_1	chr7	-	683	5	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	5602	1031	5602	-1031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTATGCTCAGGAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	141232764	141230568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141230621_141230841_141230999_141231664_141231905_141232014_141232201_141232716
ENSMUSG00000118661.1_141230915_141232978_1	chr7	-	687	5	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	5388	1377	5388	-1377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTGCCTATGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	141232978	141230914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141230999_141231664_141231905_141232014_141232201_141232716_141232828_141232912
ENSMUSG00000118661.1_141230964_141233044_1	chr7	-	704	5	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	5322	1426	5322	-1426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGCCTGTGGGTGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	141233044	141230963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141230999_141231664_141231905_141232014_141232201_141232716_141232828_141232912
ENSMUSG00000118661.1_141231729_141233272_1	chr7	-	679	5	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	5094	2191	5094	-2191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGGGCCGAGCGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	141233272	141231728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141231905_141232014_141232201_141232716_141232828_141232912_141233055_141233208
ENSMUSG00000118661.1_141231847_141233826_1	chr7	-	693	6	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	4540	2309	4540	-2309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTAGCAAGTATGTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	141233826	141231846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141231905_141232014_141232201_141232716_141232828_141232912_141233055_141233208_141233361_141233782
ENSMUSG00000118661.1_141232137_141234201_1	chr7	-	701	7	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	4165	2599	4165	-2599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTGAAGCCTAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	141234201	141232136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141232201_141232716_141232828_141232912_141233055_141233208_141233361_141233782_141233893_141233994_141234048_141234132
ENSMUSG00000118661.1_141232802_141234345_1	chr7	-	696	6	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	4021	3264	4021	-3264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACCTTCAAGGTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	141234345	141232801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141232828_141232912_141233055_141233208_141233361_141233782_141233893_141233994_141234048_141234132
ENSMUSG00000118661.1_141232992_141234698_1	chr7	-	708	6	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	3668	3454	3668	-3454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGGCGAAGGCCACATCA	NA	NA	NA	NA	NA	NA	NA	NA	141234698	141232991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141233055_141233208_141233361_141233782_141233893_141233994_141234048_141234132_141234383_141234618
ENSMUSG00000118661.1_141233783_141235060_1	chr7	-	672	6	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	3306	4245	3306	-4245	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAGCAGGATGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	141235060	141233782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141233893_141233994_141234048_141234132_141234383_141234618_141234752_141234846_141234942_141235029
ENSMUSG00000118661.1_141233840_141235122_1	chr7	-	677	6	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	3244	4302	3244	-4302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGGAGCTGCATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	141235122	141233839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141233893_141233994_141234048_141234132_141234383_141234618_141234752_141234846_141234942_141235029
ENSMUSG00000118661.1_141234333_141235922_1	chr7	-	722	7	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	2444	4795	2444	-4795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGTACCTGCCTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	141235922	141234332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141234383_141234618_141234752_141234846_141234942_141235029_141235192_141235440_141235579_141235673_141235747_141235851
ENSMUSG00000118661.1_141234692_141236072_1	chr7	-	681	7	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	2294	5154	2294	-5154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCTATGCCCATGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	141236072	141234691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141234752_141234846_141234942_141235029_141235192_141235440_141235579_141235673_141235747_141235851_141235957_141236024
ENSMUSG00000118661.1_141234736_141236147_1	chr7	-	712	7	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	2219	5198	2219	-5198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCAACTACGAGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	141236147	141234735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141234752_141234846_141234942_141235029_141235192_141235440_141235579_141235673_141235747_141235851_141235957_141236024
ENSMUSG00000118661.1_141235030_141236380_1	chr7	-	738	6	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	1986	5492	1986	-5492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTCCCTGAGTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	141236380	141235029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141235192_141235440_141235579_141235673_141235747_141235851_141235957_141236024_141236164_141236259
ENSMUSG00000118661.1_141235440_141236968_1	chr7	-	715	7	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	1398	5902	1398	-5902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTACTGTCCTGCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	141236968	141235439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141235579_141235673_141235747_141235851_141235957_141236024_141236164_141236259_141236381_141236699_141236823_141236953
ENSMUSG00000118661.1_141235515_141237009_1	chr7	-	681	7	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	1357	5977	1357	-5977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTTCCAGATGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	141237009	141235514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141235579_141235673_141235747_141235851_141235957_141236024_141236164_141236259_141236381_141236699_141236823_141236953
ENSMUSG00000118661.1_141236109_141237582_1	chr7	-	684	6	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	784	6571	784	-6571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTAGAAGGTGGCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	141237582	141236108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141236164_141236259_141236381_141236699_141236823_141236953_141237162_141237324_141237435_141237515
ENSMUSG00000118661.1_141236299_141237999_1	chr7	-	687	6	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	367	6761	367	-6761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCCCGGGGAGATCACAA	NA	NA	NA	NA	NA	NA	NA	NA	141237999	141236298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141236381_141236699_141236823_141236953_141237162_141237324_141237435_141237515_141237607_141237926
ENSMUSG00000118661.1_141236356_141238046_1	chr7	-	677	6	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	320	6818	320	-6818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGTCCTGTGTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	141238046	141236355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141236381_141236699_141236823_141236953_141237162_141237324_141237435_141237515_141237607_141237926
ENSMUSG00000118661.1_141236735_141238208_1	chr7	-	713	6	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	158	7197	158	-7197	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCCCTGCACCTTCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	141238208	141236734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141236823_141236953_141237162_141237324_141237435_141237515_141237607_141237926_141238054_141238119
ENSMUSG00000118661.1_141236806_141238243_1	chr7	-	677	6	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	123	7268	123	-7268	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAACCAAGTGTACCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	141238243	141236805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141236823_141236953_141237162_141237324_141237435_141237515_141237607_141237926_141238054_141238119
ENSMUSG00000118661.1_141237057_141238365_1	chr7	-	679	5	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	1	7519	1	-7519	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCCAGCCAAACTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	141238365	141237056	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_141237162_141237324_141237435_141237515_141237607_141237926_141238054_141238119
ENSMUSG00000118662.2_124761067_124763845_1	chr5	+	367	3	ISM	ENSMUSG00000118662.2	ENSMUST00000239501.2	2735	18	24255	1958	24255	-1958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGATGCCCCACCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	124761066	124763845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_124761177_124762380_124762538_124763745
ENSMUSG00000118664.1_39473062_39618054_1	chr8	+	1371	10	FSM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	63	1313	63	-1313	multi-exon	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGTGTAACATTCCATAA	NA	NA	NA	NA	NA	NA	NA	NA	39473061	39618054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ENSMUSG00000118664.1_39513667_39618293_1	chr8	+	1319	9	ISM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	40668	1074	40668	-1074	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTACTTCAGTTTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	39513666	39618293	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ENSMUSG00000118664.1_39513687_39618374_1	chr8	+	1380	9	ISM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	40688	993	40688	-993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATAGGACAAAGAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	39513686	39618374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ENSMUSG00000118664.1_39513753_39618412_1	chr8	+	1352	9	ISM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	40754	955	40754	-955	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGATCCTTAACCTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	39513752	39618412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ENSMUSG00000118664.1_39530378_39618516_1	chr8	+	1337	8	ISM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	57379	851	57379	-851	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCTCTTTACAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	39530377	39618516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ENSMUSG00000118664.1_39530419_39618576_1	chr8	+	1356	8	ISM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	57420	791	57420	-791	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGGACCGGGCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	39530418	39618576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ENSMUSG00000118664.1_39534855_39618692_1	chr8	+	1349	7	ISM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	61856	675	61856	-675	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTAACGAACGTAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	39534854	39618692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ENSMUSG00000118664.1_39597897_39619101_1	chr8	+	1401	3	ISM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	124898	266	124898	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAGAGATCTAATAAACT	NA	NA	NA	NA	NA	NA	NA	NA	39597896	39619101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr8_+_39597972_39610300_39610392_39617866
ENSMUSG00000118668.1_6806577_6808114_1	chr19	-	1255	3	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	9890	-1	9890	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATCTGTGGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	6808114	6806576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6807508_6807682_6807847_6807954
ENSMUSG00000118668.1_6806708_6808459_1	chr19	-	1225	4	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	9545	130	9545	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCATGGGCACAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	6808459	6806707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358
ENSMUSG00000118668.1_6806767_6808519_1	chr19	-	1226	4	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	9485	189	9485	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGGGTTAAGGAAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	6808519	6806766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358
ENSMUSG00000118668.1_6806888_6808719_1	chr19	-	1217	5	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	9285	310	9285	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATGGACCGTGTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	6808719	6806887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641
ENSMUSG00000118668.1_6806914_6808801_1	chr19	-	1273	5	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	9203	336	9203	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGGAGGGGACACCCATC	NA	NA	NA	NA	NA	NA	NA	NA	6808801	6806913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641
ENSMUSG00000118668.1_6807031_6809204_1	chr19	-	1239	6	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	8800	453	8800	-453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCCTTTCCAGGAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	6809204	6807030	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135
ENSMUSG00000118668.1_6807118_6809229_1	chr19	-	1177	6	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	8775	540	8775	-540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGACACAGAGAAGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	6809229	6807117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135
ENSMUSG00000118668.1_6807254_6809762_1	chr19	-	1314	8	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	8242	676	8242	-676	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCACCAGACTTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	6809762	6807253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623
ENSMUSG00000118668.1_6807361_6812495_1	chr19	-	1224	9	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	5509	783	5509	-783	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCCGCTAAGGGGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	6812495	6807360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468
ENSMUSG00000118668.1_6807404_6812555_1	chr19	-	1241	9	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	5449	826	5449	-826	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGGCTCCCCAGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6812555	6807403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468
ENSMUSG00000118668.1_6807466_6812596_1	chr19	-	1220	9	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	5408	888	5408	-888	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGAATGCGCCTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	6812596	6807465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468
ENSMUSG00000118668.1_6807764_6814777_1	chr19	-	1217	9	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	3227	1186	3227	-1186	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGCCCCCGCTCCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	6814777	6807763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694
ENSMUSG00000118668.1_6807954_6815051_1	chr19	-	1307	9	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	2953	1376	2953	-1376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGAGCTGGAGGACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	6815051	6807953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947
ENSMUSG00000118668.1_6808078_6815158_1	chr19	-	1218	10	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	2846	1500	2846	-1500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCGGCCAGGGTGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	6815158	6808077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123
ENSMUSG00000118668.1_6808473_6816649_1	chr19	-	1251	11	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	1355	1895	1355	-1895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGCAGAGCCCATGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	6816649	6808472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619
ENSMUSG00000118668.1_6808732_6816953_1	chr19	-	1292	11	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	1051	2154	1051	-2154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCAGCCAGATCCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	6816953	6808731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827
ENSMUSG00000118668.1_6809398_6817945_1	chr19	-	1285	11	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	59	2820	59	-2820	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCAGCTTCTCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	6817945	6809397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6817047_6817701_6817774_6817860
ENSMUSG00002076083.1_156314404_156317260_1	chr4	-	1346	8	NNC	ENSMUSG00002076083.1	novel	1313	8	NA	NA	3	40	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	1717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTAGGGCAGATCACGT	NA	NA	NA	NA	NA	NA	NA	NA	156317260	156314403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_156314720_156314961_156315144_156315370_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316647_156316858_156317085
ENSMUSG00002076083.1_156314404_156317260_2	chr4	-	1342	8	NNC	ENSMUSG00002076083.1	novel	1313	8	NA	NA	3	40	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTAGGGCAGATCACGT	NA	NA	NA	NA	NA	NA	NA	NA	156317260	156314403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_156314720_156314961_156315144_156315370_156315432_156315541_156315631_156316003_156316172_156316266_156316404_156316643_156316858_156317085
ENSMUSG00002076083.1_156314404_156317260_3	chr4	-	1350	8	FSM	ENSMUSG00002076083.1	ENST00000622660.1	1313	8	3	-40	3	40	multi-exon	FALSE	canonical	NA	NA	NA	NA	2220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTAGGGCAGATCACGT	NA	NA	NA	NA	NA	NA	NA	NA	156317260	156314403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_156314720_156314961_156315144_156315370_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085
ENSMUSG00002076083.1_156314404_156317260_4	chr4	-	1349	8	NNC	ENSMUSG00002076083.1	novel	1313	8	NA	NA	3	40	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTAGGGCAGATCACGT	NA	NA	NA	NA	NA	NA	NA	NA	156317260	156314403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_156314720_156314961_156315144_156315370_156315432_156315542_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085
ENSMUSG00002076083.1_156314404_156317260_5	chr4	-	1342	8	NNC	ENSMUSG00002076083.1	novel	1313	8	NA	NA	3	40	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTAGGGCAGATCACGT	NA	NA	NA	NA	NA	NA	NA	NA	156317260	156314403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_156314720_156314961_156315144_156315378_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085
ENSMUST00000000090.8	chr9	+	645	5	FSM	ENSMUSG00000000088.8	ENSMUST00000000090.8	645	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGGTCTTGTGATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	57428561	57439709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_57428699_57436238_57436356_57437523_57437646_57438951_57439076_57439564
ENSMUST00000000171.15	chr9	+	1256	6	FSM	ENSMUSG00000000167.15	ENSMUST00000000171.15	1256	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTATTTGGTGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	50528620	50536297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_50528899_50529745_50529950_50531054_50531179_50532244_50532491_50532920_50533187_50536159
ENSMUST00000000193.6	chr11	+	813	3	FSM	ENSMUSG00000035385.6	ENSMUST00000000193.6	813	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGACTTTGAGTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	81926396	81928279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_81926564_81927308_81927427_81927751
ENSMUST00000000260.13	chr13	+	1580	9	FSM	ENSMUSG00000000253.14	ENSMUST00000000260.13	1580	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGCTGGAGTTTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	45660919	45699858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45683183_45683266_45685769_45685877_45692500_45692544_45695954_45696115_45699348
ENSMUST00000000304.14	chr10	+	858	6	FSM	ENSMUSG00000000295.14	ENSMUST00000000304.14	858	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTGTCTTCTGTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	31189378	31204200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_31189480_31190510_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
ENSMUST00000000356.10	chr15	+	2135	4	FSM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAGCATTCTTTACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	100513229	100518642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_100513606_100514793_100514913_100515805_100516052_100517248
ENSMUST00000000388.15	chr11	+	1858	10	FSM	ENSMUSG00000000378.16	ENSMUST00000000388.15	1858	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTTGTCAAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	6496886	6546744	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ENSMUST00000000450.5	chr6	+	1767	7	FSM	ENSMUSG00000000440.13	ENSMUST00000000450.5	1767	7	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTATAGTATTTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	115399026	115467360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_115399154_115416800_115417029_115418452_115418623_115427904_115428044_115440046_115440247_115449821_115450273_115466908
ENSMUST00000000543.6	chr15	+	2033	8	FSM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGTGTGGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	101122068	101130637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
ENSMUST00000000572.7	chr5	-	2245	9	NIC	ENSMUSG00000000560.10	novel	1536	10	NA	NA	-37	5	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGAAGAAGAAGGAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	71251983	71118403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr5_-_71119442_71125342_71125521_71130767_71130971_71163449_71163603_71165265_71165410_71170043_71170127_71171758_71171980_71249314_71249431_71251874
ENSMUST00000000925.10	chr10	-	1660	9	FSM	ENSMUSG00000000902.14	ENSMUST00000000925.10	1660	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGTAGCATAAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	75757451	75732602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752606_75752746_75757136
ENSMUST00000000964.6	chr6	-	2251	2	FSM	ENSMUSG00000029844.10	ENSMUST00000000964.6	2251	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTAAGCATCTTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	52135297	52132569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_52134070_52134546
ENSMUST00000000985.7	chr14	+	2538	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTTCAGAGTTGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	54598297	54607130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ENSMUST00000001047.8	chr3	+	712	3	FSM	ENSMUSG00000001021.14	ENSMUST00000001047.8	712	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTTTTGTTTTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90507521	90510009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_90507576_90509086_90509233_90509497
ENSMUST00000001051.9	chr3	+	731	3	FSM	ENSMUSG00000001025.9	ENSMUST00000001051.9	731	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCATGTGTTCTGGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	90520188	90521721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_90520534_90521049_90521212_90521497
ENSMUST00000001081.10	chr11	-	1946	10	FSM	ENSMUSG00000001054.10	ENSMUST00000001081.10	1946	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATGATTGCATGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	51526723	51514499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
ENSMUST00000001083.4	chr11	+	825	3	NIC	ENSMUSG00000001056.4	novel	1042	4	NA	NA	36	-285	intron_retention	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTGGCAAGTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	51510597	51514256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_51510979_51513311_51513418_51513918
ENSMUST00000001109.11	chr5	-	1907	13	FSM	ENSMUSG00000001082.13	ENSMUST00000001109.11	1907	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTCTTACTATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	34794533	34790985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
ENSMUST00000001172.12	chr1	-	2109	4	FSM	ENSMUSG00000079610.10	ENSMUST00000001172.12	2109	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATGTGTGGCGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	36586526	36577174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36586166
ENSMUST00000001204.8	chr12	+	3987	6	FSM	ENSMUSG00000001175.17	ENSMUST00000001204.8	3987	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTCTTAACTGTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	100166402	100176065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_100166565_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUST00000001242.9	chr10	-	1378	7	FSM	ENSMUSG00000053329.8	ENSMUST00000001242.9	1378	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGTCTCAGGCCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	78005616	77997899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_77998553_77999230_77999388_78000671_78000765_78003228_78003349_78004642_78004757_78005206_78005260_78005428
ENSMUST00000001327.11	chr15	-	2683	15	FSM	ENSMUSG00000001281.11	ENSMUST00000001327.11	2683	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGCCTCTACTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	102140379	102124429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102135832_102136037_102140285
ENSMUST00000001402.14	chr9	-	1850	13	FSM	ENSMUSG00000001366.15	ENSMUST00000001402.14	1850	13	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTGTGGATGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	78016347	77988783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78002426_78002542_78003149_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78016283
ENSMUST00000001419.10	chr18	+	2310	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGACTTTTCTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	36926928	36932719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
ENSMUST00000001452.14	chr3	+	1977	14	FSM	ENSMUSG00000001416.14	ENSMUST00000001452.14	1977	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTGTCATGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	88204422	88229074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ENSMUST00000001454.14	chr3	+	1017	5	FSM	ENSMUSG00000001418.14	ENSMUST00000001454.14	1017	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCACTCTCCAGAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	88232388	88235675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_88232509_88232983_88233239_88233717_88233937_88235163_88235421_88235509
ENSMUST00000001548.14	chr11	-	4861	26	FSM	ENSMUSG00000001507.17	ENSMUST00000001548.14	4861	26	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTCTGCTCCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	94967540	94935299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
ENSMUST00000001559.11	chr6	-	2320	12	FSM	ENSMUSG00000001518.13	ENSMUST00000001559.11	2320	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTCTCCAATCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	128401894	128386406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ENSMUST00000001620.13	chr3	+	2459	17	FSM	ENSMUSG00000027680.16	ENSMUST00000001620.13	2459	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTATTTTGTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	34074091	34123491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34119122_34119204_34122309_34122402_34123065
ENSMUST00000001672.12	chr12	-	3378	12	FSM	ENSMUSG00000001627.13	ENSMUST00000001672.12	3378	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGGGAGGTTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	40273188	40251565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ENSMUST00000001701.4	chr15	+	2021	2	FSM	ENSMUSG00000001656.4	ENSMUST00000001701.4	2021	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGATTTTATTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	102862861	102866143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102863643_102864903
ENSMUST00000002048.8	chr11	+	1383	5	FSM	ENSMUSG00000001983.8	ENSMUST00000002048.8	1383	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTTGAGGTGTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	105956886	105964438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_105957345_105960331_105960439_105962692_105962821_105963356_105963535_105963926
ENSMUST00000002063.15	chr2	+	4600	21	FSM	ENSMUSG00000001998.16	ENSMUST00000002063.15	4600	21	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTACAGAGCTGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	126850649	126909829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ENSMUST00000002064.15	chr2	+	1160	8	FSM	ENSMUSG00000001999.16	ENSMUST00000002064.15	1160	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAATAGTGTTGATGACT	NA	NA	NA	NA	NA	NA	NA	NA	126912586	126939004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
ENSMUST00000002081.6	chrX	+	1981	15	FSM	ENSMUSG00000002007.6	ENSMUST00000002081.6	1981	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGTGTCTTGGAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	72818010	72822531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_72818113_72818189_72818321_72818498_72818608_72818709_72818798_72819083_72819172_72819625_72819733_72819803_72819970_72820066_72820093_72820575_72820706_72820793_72821034_72821114_72821216_72821529_72821638_72821710_72821781_72821859_72821953_72822109
ENSMUST00000002087.14	chrX	-	1536	12	FSM	ENSMUSG00000002012.14	ENSMUST00000002087.14	1536	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGTGCTGAACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	72703434	72699599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703332
ENSMUST00000002090.3	chrX	+	765	6	FSM	ENSMUSG00000002014.13	ENSMUST00000002090.3	765	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	72830667	72834432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_72830913_72832443_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ENSMUST00000002112.15	chr7	+	785	6	FSM	ENSMUSG00000002043.18	ENSMUST00000002112.15	785	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCAGTGCTTATCACA	NA	NA	NA	NA	NA	NA	NA	NA	19242636	19250070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_19242758_19248125_19248194_19248346_19248465_19248931_19249016_19249128_19249223_19249770
ENSMUST00000002171.14	chr2	+	1819	13	FSM	ENSMUSG00000002102.16	ENSMUST00000002171.14	1819	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTACCCATGTATAAATT	NA	NA	NA	NA	NA	NA	NA	NA	90884399	90896714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90894241_90894310_90896374
ENSMUST00000002280.11	chr7	+	2242	14	FSM	ENSMUSG00000002210.12	ENSMUST00000002280.11	2242	14	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGTTTGTTCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	24099043	24122203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_24099317_24102816_24102973_24104951_24105027_24105112_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
ENSMUST00000002303.12	chr3	+	1202	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	104696203	104701775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
ENSMUST00000002327.6	chr17	+	2277	11	FSM	ENSMUSG00000002257.9	ENSMUST00000002327.6	2277	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCCCTTCCCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	28426751	28447582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_28426913_28435938_28436080_28436574_28436761_28438718_28438956_28439050_28439198_28442645_28442755_28442861_28443161_28444818_28444986_28445074_28445274_28446780_28446872_28447042
ENSMUST00000002397.7	chr14	+	1993	10	FSM	ENSMUSG00000002326.7	ENSMUST00000002397.7	1993	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCAAGTCTGGACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	55909691	55916657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
ENSMUST00000002445.10	chr17	+	2373	16	FSM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	56980357	57018764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ENSMUST00000002452.8	chr17	+	545	4	FSM	ENSMUSG00000002379.8	ENSMUST00000002452.8	545	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATGTCTTAAAGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	57024766	57029137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_57024943_57028034_57028128_57028318_57028442_57028984
ENSMUST00000002469.9	chr8	+	1611	4	FSM	ENSMUSG00000002396.9	ENSMUST00000002469.9	1611	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGCCTTGAACCGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	71823982	71826333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_71824630_71825111_71825278_71825392_71825447_71825589
ENSMUST00000002495.18	chr7	+	1731	13	FSM	ENSMUSG00000041420.19	ENSMUST00000002495.18	1731	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATTCTCATTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	15909354	15920429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_15909493_15911316_15911499_15911633_15911794_15911885_15911937_15912669_15912721_15912875_15913026_15915965_15916078_15916244_15916394_15917715_15917793_15917962_15918022_15918559_15918644_15919372_15919443_15919981
ENSMUST00000002551.5	chr18	+	858	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCGGTGCATGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	10617774	10628230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
ENSMUST00000002710.10	chr7	-	1295	7	FSM	ENSMUSG00000002635.12	ENSMUST00000002710.10	1295	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTGGTTTATTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	33896086	33883923	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ENSMUST00000002809.14	chr2	-	860	4	FSM	ENSMUSG00000002732.15	ENSMUST00000002809.14	860	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTTGCAAATCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	76503414	76493387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_76493697_76496020_76496155_76502040_76502193_76503149
ENSMUST00000002837.11	chr5	-	3800	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAATTGTTACCTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	108280486	108269492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
ENSMUST00000002839.9	chr17	-	2926	15	FSM	ENSMUSG00000059409.10	ENSMUST00000002839.9	2926	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	47015928	46993916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ENSMUST00000002885.8	chr13	-	2363	3	FSM	ENSMUSG00000002808.8	ENSMUST00000002885.8	2363	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAGCCTATTAAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	19803974	19775875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_19777519_19778616_19778826_19803463
ENSMUST00000003079.12	chr12	-	1657	12	FSM	ENSMUSG00000002997.16	ENSMUST00000003079.12	1657	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCCAAGCATGGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	32111234	32008474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_32008721_32010380_32010522_32012997_32013137_32013896_32013963_32015113_32015189_32017211_32017314_32022048_32022203_32025917_32026025_32037878_32037963_32043729_32043783_32088620_32088657_32110780
ENSMUST00000003156.15	chr10	+	931	4	FSM	ENSMUSG00000003072.16	ENSMUST00000003156.15	931	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTTTCTAACTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	79978148	79981652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79978441_79979665_79979820_79981052_79981142_79981256
ENSMUST00000003284.16	chr7	+	2031	8	FSM	ENSMUSG00000003184.16	ENSMUST00000003284.16	2031	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	44647071	44652272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
ENSMUST00000003290.12	chr7	-	1075	7	FSM	ENSMUSG00000003190.13	ENSMUST00000003290.12	1075	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44647003	44640645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44640879_44642167_44642456_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ENSMUST00000003416.15	chr17	+	2227	13	FSM	ENSMUSG00000048440.17	ENSMUST00000003416.15	2227	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGTCTTGGTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	32755542	32770771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ENSMUST00000003434.14	chr10	-	3026	9	FSM	ENSMUSG00000003344.15	ENSMUST00000003434.14	3026	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTATGTTGTCTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	80492905	80478450	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
ENSMUST00000003444.6	chr15	+	1900	8	FSM	ENSMUSG00000003354.7	ENSMUST00000003444.6	1900	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCTGTAGTTTGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	98606087	98621217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_98606418_98606935_98607104_98615304_98615475_98616592_98616732_98618464_98618663_98618838_98619058_98620398_98620552_98620694
ENSMUST00000003521.10	chr7	-	661	5	FSM	ENSMUSG00000003429.12	ENSMUST00000003521.10	661	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGGAGTCTCATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	44773863	44771802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772975_44773720
ENSMUST00000003635.7	chr17	+	1131	2	FSM	ENSMUSG00000003541.7	ENSMUST00000003635.7	1131	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCGAAGTGTATCATTC	NA	NA	NA	NA	NA	NA	NA	NA	36132575	36133815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_36132821_36132929
ENSMUST00000003643.3	chr7	+	1235	7	FSM	ENSMUSG00000030399.3	ENSMUST00000003643.3	1235	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGAGTGTGCCAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	19144987	19155509	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_19145072_19148821_19148977_19149325_19149459_19150643_19150816_19153363_19153488_19154031_19154222_19155132
ENSMUST00000003645.9	chr7	+	1375	10	FSM	ENSMUSG00000003549.10	ENSMUST00000003645.9	1375	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	19078702	19090449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
ENSMUST00000003720.5	chr5	-	2996	18	FSM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGTTGAAAACAATGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	9047324	9016032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ENSMUST00000003762.8	chr17	-	2095	5	FSM	ENSMUSG00000003665.8	ENSMUST00000003762.8	2095	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTCCCACTTTGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	18075450	18063584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_18064562_18067812_18067946_18068409_18068636_18070202_18070911_18075399
ENSMUST00000003850.8	chr7	-	3247	7	FSM	ENSMUSG00000003752.10	ENSMUST00000003850.8	3247	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGGGTATTTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	26928053	26906596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_26907870_26911736_26911809_26912384_26912487_26913800_26914006_26916376_26916591_26919024_26919128_26926775
ENSMUST00000003860.13	chr7	+	2181	15	FSM	ENSMUSG00000003762.14	ENSMUST00000003860.13	2181	15	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTTCTCTCTGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	26932447	26957375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_26932599_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ENSMUST00000004057.9	chr16	-	718	5	FSM	ENSMUSG00000003955.9	ENSMUST00000004057.9	718	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATAGTATTATCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	35891885	35864130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655_35872779_35891839
ENSMUST00000004072.10	chr15	+	851	6	FSM	ENSMUSG00000003970.10	ENSMUST00000004072.10	851	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	76788277	76790514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ENSMUST00000004140.11	chr3	-	1289	8	FSM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTGTCTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	107925289	107919570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
ENSMUST00000004396.13	chr6	+	703	2	FSM	ENSMUSG00000004285.13	ENSMUST00000004396.13	703	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTACTGGTATGGATACG	NA	NA	NA	NA	NA	NA	NA	NA	29467716	29470511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_29467974_29470065
ENSMUST00000004508.13	chr11	-	2003	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTCTCCCTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	6224870	6220368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
ENSMUST00000004554.14	chr7	+	761	6	FSM	ENSMUSG00000012848.16	ENSMUST00000004554.14	761	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	12656216	12660613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_12656316_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ENSMUST00000004574.14	chr16	+	1927	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGTATCTGTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	22676594	22691138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ENSMUST00000004745.9	chr8	+	1847	19	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	14	13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	3681169	3692795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691894_3692056_3692645
ENSMUST00000004786.10	chr10	-	1148	7	FSM	ENSMUSG00000004667.19	ENSMUST00000004786.10	1148	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	79875629	79871782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
ENSMUST00000004910.12	chr12	+	1605	8	FSM	ENSMUSG00000004788.12	ENSMUST00000004910.12	1605	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGGAAAGGGCCCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	85266254	85273402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
ENSMUST00000005003.12	chr1	-	3510	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGTTAGAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	181669944	181642899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ENSMUST00000005016.16	chr3	-	2492	8	FSM	ENSMUSG00000004896.17	ENSMUST00000005016.16	2492	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGGAGCCTGTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	87837451	87830211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
ENSMUST00000005019.6	chr3	+	931	4	FSM	ENSMUSG00000004885.6	ENSMUST00000005019.6	931	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGGCTCCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	87855972	87860683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_87856218_87859421_87859601_87859784_87859902_87860293
ENSMUST00000005051.6	chr7	+	1766	8	FSM	ENSMUSG00000063229.16	ENSMUST00000005051.6	1766	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTGCTCTTTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	46496554	46505050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_46496813_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ENSMUST00000005256.14	chr15	-	2889	16	FSM	ENSMUSG00000005125.14	ENSMUST00000005256.14	2889	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTCTTTTCCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66841489	66801166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66831210_66831247_66832320_66832402_66841352
ENSMUST00000005292.15	chr8	+	1500	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTAGGCTCTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	85696239	85701463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ENSMUST00000005336.9	chr11	-	2313	11	FSM	ENSMUSG00000005204.13	ENSMUST00000005336.9	2313	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	69572672	69563940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ENSMUST00000005365.15	chr2	-	1352	7	FSM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	69036538	69024238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
ENSMUST00000005606.8	chr8	+	2276	10	FSM	ENSMUSG00000005469.11	ENSMUST00000005606.8	2276	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCGCTGGTTTTCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	84699621	84723072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_84699862_84707402_84707465_84707800_84707930_84713465_84713565_84714911_84714995_84717056_84717184_84717270_84717367_84717491_84717615_84721423_84721589_84721920
ENSMUST00000005607.9	chr8	+	1788	4	FSM	ENSMUSG00000005470.9	ENSMUST00000005607.9	1788	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGCTTTTTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	84682135	84696826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_84682567_84691659_84691776_84694462_84694640_84695762
ENSMUST00000005620.10	chr8	+	2996	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATACGAGGTGCTCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	84334821	84339282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_84335172_84336442_84337024_84337217
ENSMUST00000005647.4	chr2	-	1046	7	FSM	ENSMUSG00000005510.10	ENSMUST00000005647.4	1046	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTTCCTCTGTGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	90735171	90724979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734927
ENSMUST00000005826.9	chr10	+	2926	11	FSM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	4522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTTGCTCTTACGTA	NA	NA	NA	NA	NA	NA	NA	NA	128173602	128198348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ENSMUST00000005953.11	chr2	+	1804	10	FSM	ENSMUSG00000005803.15	ENSMUST00000005953.11	1804	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTTGAGAAAATCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	122607156	122651489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_122607360_122626863_122627115_122629377_122629549_122634269_122634324_122639957_122640153_122641681_122641892_122645841_122646026_122649492_122649561_122649873_122650053_122651200
ENSMUST00000006137.9	chr16	-	2320	18	FSM	ENSMUSG00000005981.12	ENSMUST00000006137.9	2320	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	3895691	3857834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ENSMUST00000006178.5	chr7	+	1630	12	FSM	ENSMUSG00000006021.6	ENSMUST00000006178.5	1630	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTCTGGCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	15853819	15861441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_15854107_15854414_15854498_15854636_15854722_15854794_15854850_15856959_15857036_15857124_15857199_15857696_15857807_15857879_15857958_15858641_15858718_15859637_15859774_15859861_15860033_15861042
ENSMUST00000006367.8	chr7	+	2041	9	FSM	ENSMUSG00000006205.14	ENSMUST00000006367.8	2041	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGCGTGCTTCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	130537932	130587390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_130538474_130563242_130563343_130563702_130563908_130581030_130581226_130581681_130581715_130583386_130583502_130583966_130584025_130585389_130585486_130586692
ENSMUST00000006381.11	chr4	-	3101	9	FSM	ENSMUSG00000006219.13	ENSMUST00000006381.11	3101	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	141325535	141303372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325393
ENSMUST00000006462.14	chr1	-	1817	11	FSM	ENSMUSG00000006299.14	ENSMUST00000006462.14	1817	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTGCATTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	74323897	74318998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ENSMUST00000006478.10	chr7	-	870	7	FSM	ENSMUSG00000006315.10	ENSMUST00000006478.10	870	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTGTTATGTCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	30428965	30427129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
ENSMUST00000006496.15	chr7	+	751	5	FSM	ENSMUSG00000006333.15	ENSMUST00000006496.15	751	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	3706991	3709896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709649
ENSMUST00000006523.12	chr12	+	445	5	FSM	ENSMUSG00000006360.12	ENSMUST00000006523.12	445	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCCTGTGTTTTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	113115631	113117497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_113115774_113116900_113116996_113117074_113117133_113117237_113117285_113117394
ENSMUST00000006562.6	chr4	+	910	9	FSM	ENSMUSG00000006395.17	ENSMUST00000006562.6	910	9	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATATGTGTATATTACAG	NA	NA	NA	NA	NA	NA	NA	NA	118217210	118219941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_118217429_118217502_118217535_118217536_118217587_118218812_118218928_118219070_118219150_118219237_118219288_118219387_118219458_118219559_118219695_118219780
ENSMUST00000006565.13	chr4	-	1793	10	FSM	ENSMUSG00000006398.16	ENSMUST00000006565.13	1793	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGCATCCTTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	118294549	118290097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
ENSMUST00000006764.9	chr8	-	849	5	FSM	ENSMUSG00000006589.9	ENSMUST00000006764.9	849	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCTTCTCCTCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	123303629	123301375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253_123303361_123303491
ENSMUST00000006774.11	chr7	+	2736	15	FSM	ENSMUSG00000006599.14	ENSMUST00000006774.11	2736	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	46445526	46473224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ENSMUST00000006853.11	chr9	-	1841	9	FSM	ENSMUSG00000006675.11	ENSMUST00000006853.11	1841	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCCGCTTGGGGGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	108474866	108456060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_108456508_108456914_108457039_108457214_108457306_108457917_108458104_108459040_108459204_108460045_108460143_108460840_108461032_108474097_108474180_108474406
ENSMUST00000006900.7	chr13	-	721	3	FSM	ENSMUSG00000006717.8	ENSMUST00000006900.7	721	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1041	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGGAAGTATTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	25015500	25001930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_25002175_25004697_25004883_25015208
ENSMUST00000007007.14	chr17	-	2051	8	FSM	ENSMUSG00000060475.14	ENSMUST00000007007.14	2051	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	13211146	13185685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
ENSMUST00000007251.14	chr17	+	1945	20	FSM	ENSMUSG00000007036.16	ENSMUST00000007251.14	1945	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	854	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTATGAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	35308266	35321963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ENSMUST00000007255.13	chr17	+	1342	7	FSM	ENSMUSG00000007039.13	ENSMUST00000007255.13	1342	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGGGCTGTGACTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	35278010	35281067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
ENSMUST00000007257.10	chr17	+	1466	6	FSM	ENSMUSG00000007041.10	ENSMUST00000007257.10	1466	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGCTTAAAGTGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	35268941	35277725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274385_35277305
ENSMUST00000007266.14	chr17	+	873	5	FSM	ENSMUSG00000007050.18	ENSMUST00000007266.14	873	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	35201104	35204867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35201344_35201595_35201664_35204084_35204116_35204224_35204285_35204392
ENSMUST00000007803.12	chr2	-	2417	3	FSM	ENSMUSG00000007659.19	ENSMUST00000007803.12	2417	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCCTTGGCTCTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	152673648	152622587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152624203_152671346_152672023_152673522
ENSMUST00000007865.7	chr8	-	1356	5	FSM	ENSMUSG00000007721.7	ENSMUST00000007865.7	1356	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCATGTCTGTATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	71326579	71320870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_71321290_71321380_71321496_71321576_71321752_71322548_71322719_71326102
ENSMUST00000007921.9	chr11	-	813	2	FSM	ENSMUSG00000007777.10	ENSMUST00000007921.9	813	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATGTGTATGAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	51579480	51576212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_51576920_51579374
ENSMUST00000008280.14	chr1	-	1563	6	FSM	ENSMUSG00000008136.15	ENSMUST00000008280.14	1563	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGTGTGGACTAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	43203121	43162233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_43162826_43167403_43167591_43170811_43170982_43180857_43181033_43192235_43192415_43202861
ENSMUST00000008477.13	chr2	+	2061	7	FSM	ENSMUSG00000008333.13	ENSMUST00000008477.13	2061	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAACTATTCTGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	142904958	142914773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
ENSMUST00000008626.10	chr17	-	1195	4	FSM	ENSMUSG00000008482.10	ENSMUST00000008626.10	1195	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTTCTCTTGTACTTA	NA	NA	NA	NA	NA	NA	NA	NA	24937037	24934812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24935684_24936039_24936137_24936436_24936583_24936956
ENSMUST00000008633.15	chr4	-	3730	7	FSM	ENSMUSG00000008489.19	ENSMUST00000008633.15	3730	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTATCTTTAAATACAT	NA	NA	NA	NA	NA	NA	NA	NA	91260291	91138999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_91141808_91142377_91142417_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ENSMUST00000008812.9	chr17	-	560	5	FSM	ENSMUSG00000008668.16	ENSMUST00000008812.9	560	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34174651	34170972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051_34174151_34174591
ENSMUST00000008826.14	chrX	+	799	7	FSM	ENSMUSG00000008682.14	ENSMUST00000008826.14	799	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	73314417	73316741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_73314481_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ENSMUST00000009036.11	chr8	-	1354	9	FSM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCATCTGACTTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	23083774	23067101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ENSMUST00000009039.6	chr15	-	570	4	FSM	ENSMUSG00000058600.14	ENSMUST00000009039.6	570	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGGTGTCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34443368	34440655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170
ENSMUST00000009220.5	chr11	+	792	6	FSM	ENSMUSG00000009076.11	ENSMUST00000009220.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	4654677	4687669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_4654722_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ENSMUST00000009241.7	chr16	-	1858	9	FSM	ENSMUSG00000009097.11	ENSMUST00000009241.7	1858	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTATTCTTTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	18409421	18400453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_18401207_18401473_18401575_18401656_18401725_18402168_18402325_18402833_18403006_18403784_18403887_18405285_18405629_18406736_18406857_18409378
ENSMUST00000009358.9	chr2	-	1382	5	FSM	ENSMUSG00000009214.10	ENSMUST00000009358.9	1382	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTCTGTCTGCTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	26962191	26951647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26952350_26952713_26952831_26956302_26956452_26957364_26957480_26961892
ENSMUST00000009425.7	chr6	-	731	6	FSM	ENSMUSG00000009281.7	ENSMUST00000009425.7	731	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTTGTTCTCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	48549622	48546629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_48546740_48546874_48546997_48547177_48547274_48548716_48548822_48549021_48549225_48549527
ENSMUST00000009530.5	chrX	+	833	6	FSM	ENSMUSG00000001131.12	ENSMUST00000009530.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCTGTATAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	20736459	20740974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_20736564_20737269_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
ENSMUST00000009831.14	chr7	-	803	9	FSM	ENSMUSG00000009687.15	ENSMUST00000009831.14	803	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGTTCAGATAAATCCAC	NA	NA	NA	NA	NA	NA	NA	NA	30741571	30732187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30737245_30737357_30738462_30738520_30739607_30739683_30740821_30740883_30741514
ENSMUST00000010189.3	chr9	+	2194	2	FSM	ENSMUSG00000010045.3	ENSMUST00000010189.3	2194	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTGTGCAGCCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	107411143	107415872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107412529_107415063
ENSMUST00000010191.13	chr9	+	1893	4	FSM	ENSMUSG00000010047.13	ENSMUST00000010191.13	1893	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTTGTCTTTTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	107446315	107449975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107446433_107447302_107448270_107448690_107448781_107449256
ENSMUST00000010211.7	chr9	+	1727	5	FSM	ENSMUSG00000010067.14	ENSMUST00000010211.7	1727	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTGGACTCTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	107431781	107439462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107432125_107434651_107434757_107434968_107435267_107435385_107435502_107438597
ENSMUST00000010239.6	chr19	-	1819	9	FSM	ENSMUSG00000010095.14	ENSMUST00000010239.6	1819	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTGGGTGTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	8691243	8684980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
ENSMUST00000010249.7	chr19	-	818	5	FSM	ENSMUSG00000118346.2	ENSMUST00000010249.7	818	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATATATTACTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8751831	8749915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8751057_8751698
ENSMUST00000010298.7	chr8	+	2330	15	FSM	ENSMUSG00000010154.8	ENSMUST00000010298.7	2330	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACATTGTCTCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	124059451	124096254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_124059760_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
ENSMUST00000010434.8	chr1	+	3458	4	FSM	ENSMUSG00000010290.8	ENSMUST00000010434.8	3458	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCAGGCCTGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	43137869	43155107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_43138023_43139874_43140042_43150157_43150534_43152345
ENSMUST00000010550.12	chr14	+	418	5	FSM	ENSMUSG00000010406.13	ENSMUST00000010550.12	418	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTGGCTTTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	54664365	54667213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_54664418_54664490_54664549_54664627_54664696_54666040_54666106_54667038
ENSMUST00000010807.6	chr19	+	3460	12	FSM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	10160251	10174238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ENSMUST00000011055.7	chr2	+	919	7	FSM	ENSMUSG00000010911.13	ENSMUST00000011055.7	919	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAAATTTTCTTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	102904019	102922989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922262_102922809
ENSMUST00000012566.9	chr13	+	1541	4	FSM	ENSMUSG00000012422.15	ENSMUST00000012566.9	1541	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTTCTCTCACTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	90237880	90252780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90251406
ENSMUST00000012734.10	chr5	+	1024	7	FSM	ENSMUSG00000029131.15	ENSMUST00000012734.10	1024	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTGTATTTGGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	29940992	29962967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29961231_29961337_29962545
ENSMUST00000013299.11	chr8	-	1275	7	FSM	ENSMUSG00000013155.11	ENSMUST00000013299.11	1275	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTGTGTTCCATAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	106434565	106430283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455
ENSMUST00000013771.15	chr5	+	1434	9	FSM	ENSMUSG00000062077.15	ENSMUST00000013771.15	1434	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCGGCTCCTTTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	31274055	31294972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_31274422_31288385_31288559_31289331_31289504_31291393_31291490_31293386_31293621_31294096_31294120_31294231_31294357_31294464_31294558_31294820
ENSMUST00000013845.13	chr14	-	1173	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTATCTCCATTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	31923855	31902118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ENSMUST00000014058.11	chr7	+	1373	6	FSM	ENSMUSG00000030693.11	ENSMUST00000014058.11	1373	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAATGTGTGTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	43430458	43434834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_43430571_43430922_43431050_43432159_43432344_43432880_43433156_43433739_43433874_43434293
ENSMUST00000014339.15	chr11	-	2330	14	FSM	ENSMUSG00000014195.17	ENSMUST00000014339.15	2330	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	100510994	100473643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ENSMUST00000014370.11	chr1	-	2098	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAAAAAAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	160040445	160029936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
ENSMUST00000014438.5	chr18	-	572	3	FSM	ENSMUSG00000014294.5	ENSMUST00000014438.5	572	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGATGTCGTACGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	36877610	36875384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_36875712_36877233_36877341_36877472
ENSMUST00000014445.7	chr16	-	596	5	FSM	ENSMUSG00000014301.14	ENSMUST00000014445.7	596	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCCTGTTTGAGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	4442852	4434327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4435868_4442714
ENSMUST00000014684.6	chr17	-	1046	8	FSM	ENSMUSG00000061613.14	ENSMUST00000014684.6	1046	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	31877866	31866054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ENSMUST00000014698.10	chr6	-	1107	7	FSM	ENSMUSG00000014554.14	ENSMUST00000014698.10	1107	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGTTCGTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	83483951	83457198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
ENSMUST00000014911.12	chr17	+	1891	9	FSM	ENSMUSG00000014767.18	ENSMUST00000014911.12	1891	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGCTTGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	15720149	15737689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_15720287_15721415_15721465_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ENSMUST00000015000.12	chr8	+	785	6	FSM	ENSMUSG00000014856.13	ENSMUST00000015000.12	785	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCGTGTGGGTGATGATG	NA	NA	NA	NA	NA	NA	NA	NA	106052985	106055689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055091_106055239_106055325_106055403
ENSMUST00000015003.10	chr8	+	1993	10	FSM	ENSMUSG00000014859.10	ENSMUST00000015003.10	1993	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGATCTGGTTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	106024294	106032002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
ENSMUST00000015124.15	chr1	-	1133	5	FSM	ENSMUSG00000014980.15	ENSMUST00000015124.15	1133	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCGTAATCATCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	152262433	152246485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_152247035_152247504_152247647_152259012_152259149_152259449_152259532_152262209
ENSMUST00000015171.11	chr8	-	2557	14	FSM	ENSMUSG00000015027.12	ENSMUST00000015171.11	2557	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATCCTGGTCTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	123338202	123304980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_123305937_123307789_123307908_123311650_123311773_123318176_123318280_123318939_123319077_123322504_123322609_123325258_123325399_123325777_123325906_123326011_123326079_123327213_123327358_123330116_123330220_123330877_123330953_123331878_123332003_123337966
ENSMUST00000015456.10	chr10	+	1284	4	FSM	ENSMUSG00000015312.10	ENSMUST00000015456.10	1284	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCTCGTTGTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	80765906	80768038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80766194_80766281_80766384_80766862_80767086_80767366
ENSMUST00000015481.6	chr2	+	1063	3	FSM	ENSMUSG00000015337.6	ENSMUST00000015481.6	1063	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTGTCCTGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	30061504	30064081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_30062079_30062853_30062964_30063702
ENSMUST00000015680.11	chr13	+	1152	7	FSM	ENSMUSG00000015536.15	ENSMUST00000015680.11	1152	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATAGATCCTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	114954812	114965259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ENSMUST00000015719.16	chr17	+	823	4	FSM	ENSMUSG00000015575.16	ENSMUST00000015719.16	823	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	26895343	26918621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26895553_26901651_26901700_26914328_26914459_26918185
ENSMUST00000015725.16	chr17	+	1098	6	FSM	ENSMUSG00000024191.16	ENSMUST00000015725.16	1098	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTGGTAAATGCTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	27000039	27011495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_27000151_27002418_27002512_27005670_27005763_27008668_27008771_27009899_27010019_27010914
ENSMUST00000015846.9	chr3	-	1851	13	FSM	ENSMUSG00000015702.14	ENSMUST00000015846.9	1851	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCCTAAAACAAAGACGG	NA	NA	NA	NA	NA	NA	NA	NA	95214487	95203406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95204164_95204547_95204671_95207463_95207523_95207612_95207709_95207841_95207927_95208402_95208463_95208621_95208702_95209645_95209737_95209976_95210091_95210296_95210392_95213172_95213270_95213642_95213734_95214384
ENSMUST00000015893.13	chr3	+	1381	7	FSM	ENSMUSG00000015749.13	ENSMUST00000015893.13	1381	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGGTGTAGTTTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	95836589	95852877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845316_95851618_95851674_95852491
ENSMUST00000015920.12	chr2	-	973	4	FSM	ENSMUSG00000015776.13	ENSMUST00000015920.12	973	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCCTGACTGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	26800581	26795599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26796006_26798104_26798314_26799004_26799086_26800304
ENSMUST00000015950.12	chr5	-	1380	7	FSM	ENSMUSG00000015806.13	ENSMUST00000015950.12	1380	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	45607578	45591394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
ENSMUST00000016488.13	chr2	+	1160	5	FSM	ENSMUSG00000016344.15	ENSMUST00000016488.13	1160	5	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCCCAAGGTTGGGGATA	NA	NA	NA	NA	NA	NA	NA	NA	180829039	180830564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_180829248_180829342_180829530_180829601_180829680_180829796_180829894_180829974
ENSMUST00000016553.5	chrX	+	4230	9	FSM	ENSMUSG00000016409.5	ENSMUST00000016553.5	4230	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTTAATGTGTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	36390447	36414399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443
ENSMUST00000016638.8	chr1	+	2454	8	FSM	ENSMUSG00000016494.10	ENSMUST00000016638.8	2454	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGTGGCCCTATAATG	NA	NA	NA	NA	NA	NA	NA	NA	194621126	194643587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_194621353_194630146_194630315_194631612_194631873_194633246_194633328_194640724_194640882_194641117_194641171_194641373_194641539_194642243
ENSMUST00000016639.12	chr19	-	1012	7	FSM	ENSMUSG00000016495.13	ENSMUST00000016639.12	1012	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAATCATGGCAGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	29339370	29326104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_29326406_29327759_29327870_29328443_29328575_29335716_29335804_29338216_29338328_29338441_29338540_29339196
ENSMUST00000016703.8	chr11	-	1993	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTAGCCTTGGCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	115915330	115912786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
ENSMUST00000016781.8	chr15	-	1013	7	FSM	ENSMUSG00000016637.8	ENSMUST00000016781.8	1013	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGGCTTCTGTTCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	78058307	78043662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_78043909_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051330_78052112_78052193_78057968
ENSMUST00000017153.4	chr2	-	2458	5	FSM	ENSMUSG00000017009.4	ENSMUST00000017153.4	2458	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCAGTTTTATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	164285106	164266166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_164268158_164270812_164271009_164271599_164271647_164273106_164273234_164285009
ENSMUST00000017188.14	chr13	-	1504	8	FSM	ENSMUSG00000060147.16	ENSMUST00000017188.14	1504	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	34119979	34101909	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119609_34119778_34119904
ENSMUST00000017384.14	chr11	+	3963	15	FSM	ENSMUSG00000078676.10	ENSMUST00000017384.14	3963	15	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTATTGTGTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	98695730	98724640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_98695813_98700501_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ENSMUST00000017548.7	chr11	+	751	6	FSM	ENSMUSG00000017404.13	ENSMUST00000017548.7	751	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGCTGCTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	97917749	97921318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_97917817_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ENSMUST00000017841.4	chr2	-	1688	12	FSM	ENSMUSG00000017697.4	ENSMUST00000017841.4	1688	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGGGTGTTTTGCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	163592159	163568503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_163568969_163569463_163569564_163570036_163570167_163571931_163571997_163572217_163572320_163572400_163572473_163573024_163573153_163574176_163574293_163574773_163574918_163577268_163577392_163580082_163580145_163591978
ENSMUST00000018113.8	chr2	-	2107	10	FSM	ENSMUSG00000017969.14	ENSMUST00000018113.8	2107	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCGCAGTAGGTAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	167082524	167044826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128_167063281_167065904_167066049_167067195_167067375_167069381_167069506_167082263
ENSMUST00000018287.10	chr5	+	2849	3	FSM	ENSMUSG00000018143.11	ENSMUST00000018287.10	2849	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTCTGGATGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	139777267	139788408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_139777468_139784893_139784974_139785839
ENSMUST00000018333.13	chr1	+	1845	11	FSM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTTGTTACCTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	143653018	143683204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143682421
ENSMUST00000018437.3	chr11	-	861	3	FSM	ENSMUSG00000018293.5	ENSMUST00000018437.3	861	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGACCTGTGTTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	70545470	70542675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70543048_70543612_70543806_70545174
ENSMUST00000018516.11	chr11	+	2696	20	FSM	ENSMUSG00000018372.14	ENSMUST00000018516.11	2696	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTACTGCTTTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	106680100	106709679	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ENSMUST00000018568.4	chr11	+	1788	13	FSM	ENSMUSG00000020537.10	ENSMUST00000018568.4	1788	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGGAACTTGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	60345416	60359580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ENSMUST00000018614.3	chr11	+	2538	14	FSM	ENSMUSG00000018470.9	ENSMUST00000018614.3	2538	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACCACGTCTGAAATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	69217083	69223868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69217750_69218945_69218990_69219076_69219115_69219334_69219415_69220675_69220721_69220808_69220854_69221008_69221053_69221222_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
ENSMUST00000018653.8	chr11	-	1032	5	FSM	ENSMUSG00000018509.9	ENSMUST00000018653.8	1032	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACTATGACATATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	62430087	62415771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_62416114_62418317_62418433_62424710_62424781_62427107_62427207_62429681
ENSMUST00000018737.13	chr11	-	2300	10	FSM	ENSMUSG00000018593.14	ENSMUST00000018737.13	2300	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	55310906	55285325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ENSMUST00000018755.10	chr11	-	1182	7	FSM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTAGTGTCTGGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	53959840	53945753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_53946066_53946182_53946301_53946615_53946780_53946968_53947151_53950763_53950843_53954460_53954613_53959665
ENSMUST00000018792.12	chr11	-	1571	4	FSM	ENSMUSG00000018648.16	ENSMUST00000018792.12	1571	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTTATTAATCATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	83959627	83938866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_83940137_83941657_83941747_83959306_83959407_83959515
ENSMUST00000018795.13	chr11	-	2151	16	FSM	ENSMUSG00000018651.15	ENSMUST00000018795.13	2151	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGTGTGTCAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	84020426	83969745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ENSMUST00000018800.9	chr11	+	879	9	FSM	ENSMUSG00000061086.13	ENSMUST00000018800.9	879	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCGTTGATTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	104441488	104478041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_104441586_104452379_104452402_104468246_104468401_104471227_104471256_104474803_104474954_104475264_104475439_104475762_104475841_104476552_104476598_104477910
ENSMUST00000018914.3	chr2	-	714	5	FSM	ENSMUSG00000018770.10	ENSMUST00000018914.3	714	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	73741670	73738790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741595
ENSMUST00000018992.4	chr11	-	2109	15	FSM	ENSMUSG00000018848.5	ENSMUST00000018992.4	2109	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35725333	35699207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
ENSMUST00000019067.8	chr11	+	902	3	FSM	ENSMUSG00000018923.14	ENSMUST00000019067.8	902	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCTCTCTCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	70342744	70344553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70342890_70343033_70343165_70343927
ENSMUST00000019183.14	chr9	+	1746	12	FSM	ENSMUSG00000019039.15	ENSMUST00000019183.14	1746	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGTGAGGCGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	108447084	108449973	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449385_108449497_108449591_108449661_108449749
ENSMUST00000019198.7	chr5	+	786	5	FSM	ENSMUSG00000019054.14	ENSMUST00000019198.7	786	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGTGTGAGCGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	136990930	136995088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_136991083_136991852_136991986_136993946_136994024_136994418_136994525_136994770
ENSMUST00000019229.15	chr4	+	1145	7	FSM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	118266562	118272308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_118266584_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ENSMUST00000019283.10	chr8	+	1836	11	FSM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	71047130	71049938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ENSMUST00000019302.10	chr7	+	815	3	FSM	ENSMUSG00000019158.10	ENSMUST00000019302.10	815	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAGACTCTGAGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	16186703	16189415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_16187096_16188045_16188139_16189085
ENSMUST00000019382.17	chr8	-	1158	13	FSM	ENSMUSG00000031708.18	ENSMUST00000019382.17	1158	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84321106	84298328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ENSMUST00000019447.15	chr11	-	1291	8	FSM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCTTTGCCTTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	100986262	100982648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
ENSMUST00000019506.9	chr8	-	616	3	FSM	ENSMUSG00000019362.9	ENSMUST00000019506.9	616	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGTGTGCTGTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	84976348	84972866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_84973323_84976102_84976159_84976244
ENSMUST00000019605.4	chr11	+	1927	7	FSM	ENSMUSG00000019461.13	ENSMUST00000019605.4	1927	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCGGATGTGATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	69737501	69741869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ENSMUST00000019833.5	chr6	+	479	2	FSM	ENSMUSG00000019689.5	ENSMUST00000019833.5	479	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTGGTTTTTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	38511757	38516384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_38511946_38516093
ENSMUST00000019854.13	chr3	+	1226	6	FSM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTAAAAGCTTTATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	87826812	87830979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_87827013_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUST00000019939.12	chr10	+	1401	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	42378026	42411366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
ENSMUST00000019942.6	chr10	-	1439	6	FSM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCAGAGAATGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	13744701	13528194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_13528756_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
ENSMUST00000019944.9	chr10	+	1466	6	FSM	ENSMUSG00000019808.9	ENSMUST00000019944.9	1466	6	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACCTGGTGTCATCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	13428637	13439120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
ENSMUST00000019951.16	chr10	-	2177	11	FSM	ENSMUSG00000019813.17	ENSMUST00000019951.16	2177	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGTGGAAATATT	NA	NA	NA	NA	NA	NA	NA	NA	41685603	41594841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
ENSMUST00000019991.8	chr10	+	2929	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATCTCTGTGTTAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	39010018	39027054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ENSMUST00000020002.9	chr10	-	846	3	FSM	ENSMUSG00000078453.4	ENSMUST00000020002.9	846	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGGTGGCTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	17899036	17887007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_17887565_17894586_17894654_17898814
ENSMUST00000020012.7	chr10	-	1981	11	FSM	ENSMUSG00000019863.8	ENSMUST00000020012.7	1981	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGGATTTTACTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	43777741	43750183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_43750703_43752467_43752674_43757468_43757587_43758061_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
ENSMUST00000020022.8	chr10	+	1961	8	FSM	ENSMUSG00000019872.14	ENSMUST00000020022.8	1961	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTTTGCCTTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	57670469	57687926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_57670881_57677006_57677221_57678515_57678661_57681662_57681760_57683450_57683621_57683972_57684154_57685141_57685267_57687308
ENSMUST00000020077.11	chr10	+	1565	11	FSM	ENSMUSG00000019920.19	ENSMUST00000020077.11	1565	11	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	58230194	58257605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_58230423_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58254468_58254609_58257275
ENSMUST00000020090.8	chr10	+	443	3	FSM	ENSMUSG00000019933.8	ENSMUST00000020090.8	443	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGGCATGGAGTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	70040496	70055541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_70040590_70052781_70052897_70055306
ENSMUST00000020109.5	chr10	-	1705	11	FSM	ENSMUSG00000019948.5	ENSMUST00000020109.5	1705	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATCTGTTTAATGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	89568157	89547832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89568035
ENSMUST00000020113.15	chr10	+	2862	12	FSM	ENSMUSG00000019952.16	ENSMUST00000020113.15	2862	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAAATGAAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	98942897	99033850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ENSMUST00000020118.5	chr10	+	2796	3	FSM	ENSMUSG00000019960.9	ENSMUST00000020118.5	2796	3	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTGTTTTTATTTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	99099092	99103350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_99099954_99100405_99100844_99101853
ENSMUST00000020145.12	chr10	+	2456	12	FSM	ENSMUSG00000019970.16	ENSMUST00000020145.12	2456	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATGTGTTAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	21870564	21875802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ENSMUST00000020150.10	chr10	+	1328	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020150.10	1328	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTATTTTGCTCCATAAT	NA	NA	NA	NA	NA	NA	NA	NA	90918801	90938469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_90919159_90929000_90929119_90937616
ENSMUST00000020188.13	chr10	+	2112	7	FSM	ENSMUSG00000020009.14	ENSMUST00000020188.13	2112	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTGGATATTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	19467696	19485977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_19467946_19473163_19473279_19477067_19477232_19479501_19479681_19481981_19482169_19483004_19483130_19484884
ENSMUST00000020203.7	chr10	-	861	4	FSM	ENSMUSG00000020018.7	ENSMUST00000020203.7	861	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGTTCACTTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	93425568	93418890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_93419393_93419891_93419957_93423859_93423986_93425400
ENSMUST00000020227.11	chr10	-	3026	13	FSM	ENSMUSG00000020038.11	ENSMUST00000020227.11	3026	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTGTACTTGTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	85020928	84967563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84992949_84993059_85020177
ENSMUST00000020248.16	chr10	+	1052	7	FSM	ENSMUSG00000020056.17	ENSMUST00000020248.16	1052	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAATGTGTCTTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	88036954	88082020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055111_88055223_88070255_88070321_88081617
ENSMUST00000020285.10	chr10	+	2613	7	FSM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	61516088	61529076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ENSMUST00000020307.11	chr10	-	1379	5	FSM	ENSMUSG00000020107.11	ENSMUST00000020307.11	1379	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGCTGTGCGTATCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	59838933	59823729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838239_59838290_59838777
ENSMUST00000020346.6	chr10	-	3681	2	FSM	ENSMUSG00000020137.6	ENSMUST00000020346.6	3681	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAAAACACAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	115220315	115205376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_115208852_115220109
ENSMUST00000020359.7	chr10	-	979	6	FSM	ENSMUSG00000020150.14	ENSMUST00000020359.7	979	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGAAGACTAGTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	80096802	80093997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80094292_80094773_80094933_80095010_80095079_80095434_80095499_80095601_80095748_80096554
ENSMUST00000020372.6	chr10	-	445	3	FSM	ENSMUSG00000020163.13	ENSMUST00000020372.6	445	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2979	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTCCTTCCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	80242664	80238830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80238990_80239969_80240121_80242529
ENSMUST00000020435.11	chr10	-	955	5	FSM	ENSMUSG00000020216.14	ENSMUST00000020435.11	955	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCATCTACTCCTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	80647719	80644329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80644874_80644979_80645063_80646009_80646199_80646297_80646401_80647683
ENSMUST00000020454.11	chr10	-	1621	9	FSM	ENSMUSG00000020232.18	ENSMUST00000020454.11	1621	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTTAATATTTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	81186258	81181884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967
ENSMUST00000020461.15	chr10	-	3348	10	FSM	ENSMUSG00000055053.19	ENSMUST00000020461.15	3348	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATCCATTA	NA	NA	NA	NA	NA	NA	NA	NA	81263007	81234971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81262909
ENSMUST00000020504.6	chr11	+	636	3	FSM	ENSMUSG00000020267.7	ENSMUST00000020504.6	636	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTGTTACTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	54757208	54761327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_54757427_54760673_54760779_54761014
ENSMUST00000020528.14	chr11	+	1737	4	FSM	ENSMUSG00000020287.16	ENSMUST00000020528.14	1737	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGCACGCGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	32176510	32182700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_32176718_32177751_32177950_32179848_32180054_32181573
ENSMUST00000020552.8	chr10	+	1143	2	FSM	ENSMUSG00000020308.8	ENSMUST00000020552.8	1143	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1538	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTGCTGGTCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	79505202	79511961	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79505618_79511233
ENSMUST00000020553.5	chr11	-	1018	2	FSM	ENSMUSG00000020309.7	ENSMUST00000020553.5	1018	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTGTACTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30936334	30926951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_30927747_30936111
ENSMUST00000020576.8	chr11	-	3512	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	40646138	40639378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
ENSMUST00000020586.7	chr11	-	2263	10	FSM	ENSMUSG00000020334.7	ENSMUST00000020586.7	2263	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTAACAATGCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	53918916	53873948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_53874512_53877303_53877440_53879607_53879791_53881449_53881665_53882810_53882912_53886789_53886917_53888202_53888375_53896219_53896375_53898593_53898698_53918409
ENSMUST00000020625.7	chr11	+	1609	13	FSM	ENSMUSG00000020359.14	ENSMUST00000020625.7	1609	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTTGGTACATAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	51475615	51492155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_51475707_51476340_51476460_51477387_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51491935
ENSMUST00000020640.8	chr11	+	1447	8	FSM	ENSMUSG00000020372.16	ENSMUST00000020640.8	1447	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCCACCTTTCCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	48691186	48697261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUST00000020653.6	chr11	+	1201	7	FSM	ENSMUSG00000020386.6	ENSMUST00000020653.6	1201	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTGTTGGGCAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	51654513	51682752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_51654619_51668313_51668389_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
ENSMUST00000020685.10	chr11	-	634	5	FSM	ENSMUSG00000020415.17	ENSMUST00000020685.10	634	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGAGTCTCTGGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	43317054	43311857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317027
ENSMUST00000020687.15	chr11	-	741	6	FSM	ENSMUSG00000020415.17	ENSMUST00000020687.15	741	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAACCCCTGATTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	43317078	43311076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317027
ENSMUST00000020692.7	chr1	-	2743	2	FSM	ENSMUSG00000020423.7	ENSMUST00000020692.7	2743	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTCTCCTTGGGAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	134006858	134002907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_134005442_134006649
ENSMUST00000020710.11	chr11	-	1897	10	FSM	ENSMUSG00000020432.13	ENSMUST00000020710.11	1897	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	3881995	3867191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881585_3881975
ENSMUST00000020721.15	chr11	-	3335	21	FSM	ENSMUSG00000020439.18	ENSMUST00000020721.15	3335	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTCTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	3489292	3467522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
ENSMUST00000020849.9	chr11	-	4308	16	FSM	ENSMUSG00000020541.13	ENSMUST00000020849.9	4308	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTCCCTGTTGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	90578433	90534290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
ENSMUST00000020856.6	chr12	-	1871	12	FSM	ENSMUSG00000020547.6	ENSMUST00000020856.6	1871	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATGGTCAGAGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	36206824	36141833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666
ENSMUST00000020877.9	chr12	+	4325	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTGTACAGCGACAT	NA	NA	NA	NA	NA	NA	NA	NA	33479633	33491391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
ENSMUST00000020947.7	chr12	+	1480	2	FSM	ENSMUSG00000020621.7	ENSMUST00000020947.7	1480	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTGCATTTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	10440771	10445562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_10441227_10444537
ENSMUST00000020957.13	chr12	+	1652	4	FSM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCTCTCGAGAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	28725229	28732174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_28725372_28727776_28727897_28729388_28729569_28730964
ENSMUST00000020997.15	chr12	+	1750	10	FSM	ENSMUSG00000020669.16	ENSMUST00000020997.15	1750	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTTGTGTTCACTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	30961666	31010161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_30962227_30972233_30972345_30974762_30974877_30976808_30976874_30989572_30989686_30990289_30990419_30991965_30992129_30992788_30992868_31008846_31008904_31009802
ENSMUST00000021038.5	chr11	+	3335	20	FSM	ENSMUSG00000020695.15	ENSMUST00000021038.5	3335	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCAATCTGTGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	105183493	105234697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_105183728_105216327_105216730_105218797_105218972_105219102_105219268_105219488_105219603_105220050_105220195_105222709_105222899_105223061_105223217_105224449_105224558_105226962_105227079_105227450_105227600_105228453_105228672_105229617_105229761_105231043_105231147_105231363_105231503_105231623_105231660_105231919_105232081_105232176_105232245_105233918_105234020_105234281
ENSMUST00000021050.14	chr11	+	1785	11	FSM	ENSMUSG00000020709.16	ENSMUST00000021050.14	1785	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAACAACAAAAACTACAG	NA	NA	NA	NA	NA	NA	NA	NA	80044930	80069784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_80045136_80045815_80045947_80047770_80047863_80050988_80051069_80052973_80053087_80056498_80056646_80061503_80061588_80064913_80064977_80066881_80066960_80067871_80068101_80069221
ENSMUST00000021065.6	chr11	-	1249	4	FSM	ENSMUSG00000020722.6	ENSMUST00000021065.6	1249	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTTTCCCATATGCC	NA	NA	NA	NA	NA	NA	NA	NA	107607348	107594043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_107594717_107595130_107595269_107596602_107596678_107606985
ENSMUST00000021082.7	chr11	-	858	5	FSM	ENSMUSG00000020736.13	ENSMUST00000021082.7	858	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGATCTTTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	115382688	115381245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115381571_115381678_115381794_115381963_115382025_115382096_115382198_115382432
ENSMUST00000021083.7	chr11	-	1375	5	FSM	ENSMUSG00000020737.13	ENSMUST00000021083.7	1375	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGTGTTTTGTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	115405213	115388178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115389126_115391491_115391511_115392830_115392929_115393857_115394001_115405045
ENSMUST00000021087.14	chr11	-	1372	6	FSM	ENSMUSG00000020743.16	ENSMUST00000021087.14	1372	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	115503795	115498743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503610
ENSMUST00000021089.11	chr11	-	2307	7	FSM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGACTGCAGACCATT	NA	NA	NA	NA	NA	NA	NA	NA	115518971	115505003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518890
ENSMUST00000021116.12	chr11	+	3735	16	FSM	ENSMUSG00000020770.14	ENSMUST00000021116.12	3735	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	115921147	115952040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ENSMUST00000021130.7	chr11	+	902	4	FSM	ENSMUSG00000020778.13	ENSMUST00000021130.7	902	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTGTGCTGATGCGG	NA	NA	NA	NA	NA	NA	NA	NA	116089680	116106144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_116089810_116095670_116095806_116096436_116096595_116105664
ENSMUST00000021133.16	chr11	-	2526	16	FSM	ENSMUSG00000020780.16	ENSMUST00000021133.16	2526	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCTGGTTTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	116165043	116135991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ENSMUST00000021170.9	chr11	-	2063	4	FSM	ENSMUSG00000020814.14	ENSMUST00000021170.9	2063	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCGTTCTTAAACGTT	NA	NA	NA	NA	NA	NA	NA	NA	116718872	116693887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116695481_116702748_116702843_116707010_116707069_116718554
ENSMUST00000021181.13	chr11	-	779	5	FSM	ENSMUSG00000020831.19	ENSMUST00000021181.13	779	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	70128740	70126031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70126295_70126849_70127038_70127702_70127805_70128356_70128452_70128609
ENSMUST00000021207.7	chr11	-	3512	3	FSM	ENSMUSG00000020846.7	ENSMUST00000021207.7	3512	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGGAATGCGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	75918608	75910019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_75913067_75915773_75915884_75918253
ENSMUST00000021217.11	chr11	-	1012	5	FSM	ENSMUSG00000020857.12	ENSMUST00000021217.11	1012	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGTTCAGTACTCA	NA	NA	NA	NA	NA	NA	NA	NA	93847085	93840639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320_93846451_93846651
ENSMUST00000021251.7	chr11	-	1336	8	FSM	ENSMUSG00000020878.7	ENSMUST00000021251.7	1336	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAATGCTTTTCATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	96932233	96925427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_96925851_96926284_96926431_96926697_96926768_96926921_96927032_96927295_96927343_96929597_96929707_96931692_96931799_96931908
ENSMUST00000021313.9	chr11	-	1744	5	FSM	ENSMUSG00000020935.9	ENSMUST00000021313.9	1744	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAATTCCACTTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	102907994	102884872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891183_102907875
ENSMUST00000021314.8	chr11	+	4861	12	FSM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCCTGGTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	102919171	102959738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ENSMUST00000021332.10	chr12	-	1022	7	FSM	ENSMUSG00000020949.10	ENSMUST00000021332.10	1022	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	65120781	65109197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
ENSMUST00000021335.7	chr12	+	2096	25	FSM	ENSMUSG00000020952.11	ENSMUST00000021335.7	2096	25	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	12724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTATTCTTGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	51424362	51496884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ENSMUST00000021356.6	chr12	-	3390	3	FSM	ENSMUSG00000020973.8	ENSMUST00000021356.6	3390	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTTACCTACATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	69245203	69235860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_69237169_69239581_69239726_69243265
ENSMUST00000021362.5	chr12	+	1905	13	FSM	ENSMUSG00000020978.11	ENSMUST00000021362.5	1905	13	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGACTTTTTATCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	69343495	69357461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
ENSMUST00000021379.8	chr12	+	1588	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTAGTTTAATTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	59060178	59075256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ENSMUST00000021405.8	chr16	+	950	5	FSM	ENSMUSG00000021018.9	ENSMUST00000021405.8	950	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTCCATTGTCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	20536414	20541017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20539268_20539353_20540659
ENSMUST00000021406.6	chr12	-	1105	8	FSM	ENSMUSG00000062198.6	ENSMUST00000021406.6	1105	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGCTCTTTTATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55126895	55092445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55126765
ENSMUST00000021407.11	chr12	+	1515	15	FSM	ENSMUSG00000073079.7	ENSMUST00000021407.11	1515	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGCCCCCTTACTAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	55135986	55159676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ENSMUST00000021416.9	chr12	-	1512	9	FSM	ENSMUSG00000021028.9	ENSMUST00000021416.9	1512	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGTCTTTTTTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	56392679	56375087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
ENSMUST00000021523.7	chr12	+	2505	8	FSM	ENSMUSG00000021103.13	ENSMUST00000021523.7	2505	8	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGACTTAGAAATCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73170490	73320762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_73170701_73214773_73214927_73217367_73217442_73225978_73226083_73228557_73228699_73234913_73235040_73265794_73265917_73319187
ENSMUST00000021539.16	chr12	+	1742	15	FSM	ENSMUSG00000021115.16	ENSMUST00000021539.16	1742	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAGCGTTTATTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	105976574	106041668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106039877_106039938_106041265
ENSMUST00000021559.14	chr12	-	1293	4	FSM	ENSMUSG00000021131.15	ENSMUST00000021559.14	1293	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTTCTTATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	80691115	80680795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80690537
ENSMUST00000021594.5	chr12	+	2019	15	FSM	ENSMUSG00000021177.17	ENSMUST00000021594.5	2019	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTACAGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	99857431	99921473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ENSMUST00000021595.10	chr12	+	1591	11	FSM	ENSMUSG00000021178.10	ENSMUST00000021595.10	1591	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGGAAGAGTTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	100076412	100089664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ENSMUST00000021609.10	chr12	+	3390	13	FSM	ENSMUSG00000021192.17	ENSMUST00000021609.10	3390	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAGTGCTTTATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	102435450	102464166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_102436241_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
ENSMUST00000021647.14	chr12	-	1815	9	FSM	ENSMUSG00000021224.16	ENSMUST00000021647.14	1815	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTCTGTGACAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	83889117	83842212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991
ENSMUST00000021667.7	chr12	+	883	4	FSM	ENSMUSG00000021241.8	ENSMUST00000021667.7	883	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTCTTATCGTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	84820024	84821859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_84820146_84820348_84820452_84820566_84820683_84821316
ENSMUST00000021719.7	chr12	-	366	4	FSM	ENSMUSG00000021290.7	ENSMUST00000021719.7	366	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCTTCCCCTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	111933411	111927808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_111927973_111928866_111928891_111929663_111929788_111933357
ENSMUST00000021728.12	chr12	+	924	4	FSM	ENSMUSG00000064326.14	ENSMUST00000021728.12	924	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1697	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	112611112	112615579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_112611519_112613271_112613467_112614258_112614416_112615413
ENSMUST00000021738.10	chr13	-	2971	7	FSM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCAACTGGTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	13568199	13532204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ENSMUST00000021790.7	chr13	+	914	6	FSM	ENSMUSG00000021361.8	ENSMUST00000021790.7	914	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTCGTCTTTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	41169767	41176062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_41169875_41170590_41170650_41171181_41171259_41171831_41171934_41174594_41174683_41175581
ENSMUST00000021800.6	chr13	-	4339	9	FSM	ENSMUSG00000021371.6	ENSMUST00000021800.6	4339	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGTACAGTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	43713637	43691868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
ENSMUST00000021818.9	chr13	-	1144	8	FSM	ENSMUSG00000021391.11	ENSMUST00000021818.9	1144	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGTGCTTTGTACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	49806261	49617498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49801041_49801131_49803596_49803776_49806058
ENSMUST00000021820.14	chr13	+	2310	8	FSM	ENSMUSG00000021388.15	ENSMUST00000021820.14	2310	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTCTGGTTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	49697962	49721041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_49698194_49705116_49705393_49707395_49707509_49710722_49710937_49712266_49712378_49716916_49717011_49717231_49717371_49719909
ENSMUST00000021843.13	chr13	+	1063	8	FSM	ENSMUSG00000046949.17	ENSMUST00000021843.13	1063	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTTGCACTGTATTAG	NA	NA	NA	NA	NA	NA	NA	NA	34148733	34169629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_34148784_34150027_34150110_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ENSMUST00000021854.14	chr13	-	1746	10	FSM	ENSMUSG00000021417.16	ENSMUST00000021854.14	1746	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTAAGAATTCATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	35178264	35161731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177812
ENSMUST00000021866.10	chr13	+	2738	17	FSM	ENSMUSG00000021428.10	ENSMUST00000021866.10	2738	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTGCATTCTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	38220970	38245409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
ENSMUST00000021880.10	chr13	-	1373	5	FSM	ENSMUSG00000044258.11	ENSMUST00000021880.10	1373	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCCTAAATTGTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	61084439	61081968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_61082843_61083143_61083267_61083360_61083484_61083771_61083890_61084304
ENSMUST00000021903.3	chr13	+	1071	4	FSM	ENSMUSG00000021453.3	ENSMUST00000021903.3	1071	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAACTTAATGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	52000713	52002504	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_52000869_52001387_52001490_52001591_52001806_52001904
ENSMUST00000021958.6	chr13	+	544	4	FSM	ENSMUSG00000021496.13	ENSMUST00000021958.6	544	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGAGTTATTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	55875180	55924641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_55875288_55880748_55880881_55923179_55923261_55924417
ENSMUST00000021959.11	chr13	+	1527	5	FSM	ENSMUSG00000021497.11	ENSMUST00000021959.11	1527	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAAGTGGTTTCGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55862462	55874040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_55862658_55865604_55866081_55869391_55869556_55872320_55872452_55873479
ENSMUST00000021963.5	chr13	+	1382	4	FSM	ENSMUSG00000021501.5	ENSMUST00000021963.5	1382	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGAAGTCTGTACATT	NA	NA	NA	NA	NA	NA	NA	NA	55770817	55780224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_55771070_55772523_55772985_55776389_55776456_55779621
ENSMUST00000021991.11	chr13	-	1479	8	FSM	ENSMUSG00000021519.12	ENSMUST00000021991.11	1479	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGTTTCAATATTA	NA	NA	NA	NA	NA	NA	NA	NA	67081152	67060181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ENSMUST00000021993.5	chr13	-	535	4	FSM	ENSMUSG00000021520.5	ENSMUST00000021993.5	535	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGATTATTTGAATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	67053442	67048680	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_67048891_67049465_67049633_67050793_67050866_67053356
ENSMUST00000022060.7	chr13	-	1131	6	FSM	ENSMUSG00000021576.7	ENSMUST00000022060.7	1131	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGCTGGTTTTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	74465440	74451627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_74452168_74453659_74453770_74457802_74457962_74459786_74459832_74464448_74464511_74465225
ENSMUST00000022078.12	chr13	-	4980	12	FSM	ENSMUSG00000021589.14	ENSMUST00000022078.12	4980	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAATGAAGTGTTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	76091986	76017655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_76020581_76024289_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
ENSMUST00000022097.6	chr13	-	568	4	FSM	ENSMUSG00000021606.9	ENSMUST00000022097.6	568	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGAGTTGTTTCTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	73476661	73467992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_73468180_73468412_73468536_73475534_73475589_73476457
ENSMUST00000022115.14	chr13	-	1540	8	FSM	ENSMUSG00000021615.14	ENSMUST00000022115.14	1540	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATGTTATTTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	90237727	89997039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237615
ENSMUST00000022121.13	chr13	-	1541	6	FSM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	91955824	91944651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953869_91954280_91955728
ENSMUST00000022145.15	chr13	+	601	3	FSM	ENSMUSG00000021643.16	ENSMUST00000022145.15	601	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGAATATTATTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	100244519	100250746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_100244738_100245530_100245640_100250472
ENSMUST00000022147.15	chr13	+	1222	9	FSM	ENSMUSG00000021645.17	ENSMUST00000022147.15	1222	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTGACTTTATAGATA	NA	NA	NA	NA	NA	NA	NA	NA	100261359	100274198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863_100268975_100272196_100272248_100273888
ENSMUST00000022169.10	chr13	-	1905	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	97334865	97312838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUST00000022203.10	chr13	+	2051	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGCCTACAGTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	107083666	107096268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ENSMUST00000022227.8	chr13	+	1217	10	FSM	ENSMUSG00000021714.16	ENSMUST00000022227.8	1217	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATAGTTTGTCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	104365895	104386125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_104366165_104367236_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
ENSMUST00000022228.13	chr13	-	2071	14	FSM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGCCTCCCGCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	104953461	104767647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ENSMUST00000022245.10	chr13	-	3319	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGAGGCCTGAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	118523788	118514916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ENSMUST00000022272.14	chr14	-	1650	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGGTTGTATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	14255633	14246209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_14247587_14249552_14249623_14255430
ENSMUST00000022287.8	chr13	-	1851	6	FSM	ENSMUSG00000021765.10	ENSMUST00000022287.8	1851	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTAAACCATTTAAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	114595485	114589505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_114590042_114590815_114591047_114591656_114591882_114592219_114592439_114592898_114593091_114595037
ENSMUST00000022310.7	chr14	-	2935	12	FSM	ENSMUSG00000021785.9	ENSMUST00000022310.7	2935	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAGTGAAAGAGTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	6220483	6157836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
ENSMUST00000022322.17	chr14	+	3390	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGTTCTCTATGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	34032683	34067222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ENSMUST00000022341.7	chr14	-	1562	8	FSM	ENSMUSG00000021807.7	ENSMUST00000022341.7	1562	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATATACTTGAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	19873892	19861418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
ENSMUST00000022458.11	chr14	+	3460	17	FSM	ENSMUSG00000021901.11	ENSMUST00000022458.11	3460	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGGTCGGTAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	30973406	30981901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ENSMUST00000022517.9	chr14	-	1497	8	FSM	ENSMUSG00000021947.12	ENSMUST00000022517.9	1497	8	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAATCTATTTCTACAC	NA	NA	NA	NA	NA	NA	NA	NA	57635986	57512449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_57513020_57513373_57513481_57523821_57523928_57541049_57541245_57550424_57550587_57600378_57600506_57620214_57620323_57635864
ENSMUST00000022518.8	chr14	-	836	5	FSM	ENSMUSG00000021951.8	ENSMUST00000022518.8	836	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGTCATGAGGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	57809026	57787054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378_57803542_57808999
ENSMUST00000022528.6	chr14	+	1295	7	FSM	ENSMUSG00000021958.6	ENSMUST00000022528.6	1295	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGAGCCTTTCACATGA	NA	NA	NA	NA	NA	NA	NA	NA	64097812	64157304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_64097897_64101664_64101775_64103551_64103645_64105967_64106047_64109750_64109844_64115560_64115638_64156545
ENSMUST00000022595.8	chr14	-	918	5	FSM	ENSMUSG00000022018.8	ENSMUST00000022595.8	918	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACTTTGAAAGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	79539085	79526195	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_79526560_79527683_79527747_79529110_79529219_79538154_79538341_79538888
ENSMUST00000022650.9	chr14	+	2797	18	FSM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGACTGTAGAGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	99337342	99491929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99491596
ENSMUST00000022702.13	chr14	+	2971	15	FSM	ENSMUSG00000022106.15	ENSMUST00000022702.13	2971	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGGAATCCTATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	73380601	73421133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_73380629_73388972_73389056_73391759_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ENSMUST00000022705.7	chr14	+	1328	7	FSM	ENSMUSG00000022109.7	ENSMUST00000022705.7	1328	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTTTTTTCAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	73747464	73755985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
ENSMUST00000022791.9	chr15	-	1565	7	FSM	ENSMUSG00000022184.9	ENSMUST00000022791.9	1565	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCATGGTCTCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4009055	3994926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_3995275_3998388_3998565_4000818_4000995_4001110_4001187_4005238_4005460_4007243_4007480_4008723
ENSMUST00000022794.14	chr14	-	2365	13	FSM	ENSMUSG00000022185.20	ENSMUST00000022794.14	2365	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	54891152	54879617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54889173_54889316_54890670_54890736_54891136
ENSMUST00000022821.8	chr14	+	1392	8	FSM	ENSMUSG00000022210.8	ENSMUST00000022821.8	1392	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGCGTGTTTATTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	55716214	55727797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549_55724621_55724716_55724769_55725040_55725176_55725616_55725673_55727275
ENSMUST00000022828.9	chr14	-	855	5	FSM	ENSMUSG00000022217.15	ENSMUST00000022828.9	855	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATGTATTTATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	55822759	55818978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_55819201_55819337_55819433_55819512_55819583_55822135_55822213_55822368
ENSMUST00000022867.5	chr15	+	1902	7	FSM	ENSMUSG00000022257.5	ENSMUST00000022867.5	1902	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGTGGCTCCGCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	34238173	34284448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_34238569_34258826_34258939_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34277674_34283445
ENSMUST00000022871.7	chr15	+	3527	5	FSM	ENSMUSG00000022261.7	ENSMUST00000022871.7	3527	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGTGTGAGTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	32920868	33035081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_32921452_33017247_33017360_33023794_33023932_33028192_33028329_33032522
ENSMUST00000022904.8	chr15	+	2071	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTAGTCATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	38662176	38692690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ENSMUST00000022906.8	chr15	+	4081	7	FSM	ENSMUSG00000022297.16	ENSMUST00000022906.8	4081	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGATTGTATTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	38869727	38901581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_38869885_38870619_38870959_38889060_38889258_38894209_38895228_38897244_38897394_38898202_38898623_38899780
ENSMUST00000022909.10	chr15	+	1551	11	FSM	ENSMUSG00000022300.11	ENSMUST00000022909.10	1551	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCAGTTGTGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38976259	39010251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_38976447_38982105_38982306_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
ENSMUST00000022925.10	chr15	-	1295	8	FSM	ENSMUSG00000022312.12	ENSMUST00000022925.10	1295	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTGTATTTATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	51728919	51649953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
ENSMUST00000022964.9	chr15	+	1613	7	FSM	ENSMUSG00000022339.10	ENSMUST00000022964.9	1613	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGTATATCCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	44482986	44504422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_44483339_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ENSMUST00000023059.13	chr15	-	1324	9	FSM	ENSMUSG00000022422.14	ENSMUST00000023059.13	1324	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCCTGACTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	54953887	54939494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
ENSMUST00000023085.7	chr15	-	590	3	FSM	ENSMUSG00000022450.7	ENSMUST00000023085.7	590	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTCTCTCTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	82238523	82234340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_82234573_82235179_82235296_82238281
ENSMUST00000023104.7	chr15	-	2271	17	FSM	ENSMUSG00000022466.7	ENSMUST00000023104.7	2271	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGTCGATATTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	97603706	97572977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ENSMUST00000023112.12	chr15	-	1300	8	FSM	ENSMUSG00000022474.16	ENSMUST00000023112.12	1300	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	81845131	81835308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ENSMUST00000023113.7	chr15	-	2542	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCTGTCATCAAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	81810441	81799229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
ENSMUST00000023210.8	chr15	+	1520	7	FSM	ENSMUSG00000022551.9	ENSMUST00000023210.8	1520	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCATGGTGTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	76227722	76230460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ENSMUST00000023213.8	chr15	+	1993	6	FSM	ENSMUSG00000022554.8	ENSMUST00000023213.8	1993	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGACTCTCCTGCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	76253097	76255637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76253770_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
ENSMUST00000023221.13	chr15	+	2107	12	FSM	ENSMUSG00000022561.14	ENSMUST00000023221.13	2107	12	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGCCCGCTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	76215430	76219107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ENSMUST00000023231.7	chr15	-	1335	11	FSM	ENSMUSG00000022570.8	ENSMUST00000023231.7	1335	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGACTCAGAAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	75801602	75796531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801501
ENSMUST00000023387.14	chr16	-	2838	8	FSM	ENSMUSG00000022704.17	ENSMUST00000023387.14	2838	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	43710048	43681769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43698319_43698397_43700661_43700718_43701355_43701577_43709929
ENSMUST00000023405.16	chr16	-	1696	8	FSM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATTTTTATCCTTAACA	NA	NA	NA	NA	NA	NA	NA	NA	59459530	59433311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_59434208_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
ENSMUST00000023432.10	chr16	-	1286	10	FSM	ENSMUSG00000022751.10	ENSMUST00000023432.10	1286	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1077	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGATGTTTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	56987695	56977027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
ENSMUST00000023441.11	chr16	+	2345	12	FSM	ENSMUSG00000022758.15	ENSMUST00000023441.11	2345	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTAGTAGTAGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	17379748	17389875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_17380048_17380584_17380736_17382819_17382892_17385301_17385378_17385569_17385664_17385736_17385818_17385896_17386039_17386124_17386235_17388221_17388316_17388396_17388463_17388602_17388681_17388793
ENSMUST00000023453.10	chr16	-	1108	3	FSM	ENSMUSG00000022769.10	ENSMUST00000023453.10	1108	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGTGCATGAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	16950247	16948001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_16948653_16949460_16949658_16949987
ENSMUST00000023524.13	chr16	+	2031	8	FSM	ENSMUSG00000022827.15	ENSMUST00000023524.13	2031	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTCATTTCTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	37360246	37392747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_37360323_37362208_37362301_37377182_37377313_37380356_37380472_37383977_37384129_37387681_37387754_37390749_37390789_37391391
ENSMUST00000023532.7	chr16	+	4107	13	FSM	ENSMUSG00000022833.8	ENSMUST00000023532.7	4107	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGTGAATTTGTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	34510985	34545564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ENSMUST00000023562.9	chr16	-	1360	5	FSM	ENSMUSG00000022856.10	ENSMUST00000023562.9	1360	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCAGGTTCTGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	21766302	21753075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21764750_21764905_21766117
ENSMUST00000023598.15	chr16	-	1228	11	FSM	ENSMUSG00000022881.16	ENSMUST00000023598.15	1228	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATATACAATTTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	22946487	22932692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ENSMUST00000023608.14	chr16	-	809	5	FSM	ENSMUSG00000022890.14	ENSMUST00000023608.14	809	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	84632513	84624758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_84624884_84625312_84625438_84628216_84628396_84631696_84631872_84632308
ENSMUST00000023666.11	chr16	+	1922	14	FSM	ENSMUSG00000022945.13	ENSMUST00000023666.11	1922	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	93680788	93703003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ENSMUST00000023691.12	chr16	+	1850	7	FSM	ENSMUSG00000022969.14	ENSMUST00000023691.12	1850	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGGTTTGTTCTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	91203122	91222722	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_91203261_91204505_91204630_91208770_91208929_91211500_91211668_91216219_91216368_91218620_91218779_91221765
ENSMUST00000023727.17	chr15	-	2311	10	FSM	ENSMUSG00000022992.18	ENSMUST00000023727.17	2311	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTGTAAAGTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	98432125	98416701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426907_98427166_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ENSMUST00000023762.13	chr15	-	2096	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	99670482	99633472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ENSMUST00000023775.9	chr15	-	1108	8	FSM	ENSMUSG00000023031.9	ENSMUST00000023775.9	1108	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCTTGCATTTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	100585802	100572301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_100572599_100573204_100573355_100579023_100579170_100580767_100580905_100582460_100582587_100583014_100583116_100585005_100585089_100585734
ENSMUST00000023829.8	chr17	+	1913	3	FSM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTTGTCATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	29312742	29319696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_29312836_29317370_29317812_29318317
ENSMUST00000023836.4	chrX	-	1763	6	FSM	ENSMUSG00000023074.12	ENSMUST00000023836.4	1763	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	52459379	52433897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_52434867_52436580_52436743_52444529_52444751_52446286_52446363_52446450_52446705_52459298
ENSMUST00000023851.9	chr6	-	875	5	FSM	ENSMUSG00000023089.13	ENSMUST00000023851.9	875	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTCCATGTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	24528012	24518664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_24518824_24519190_24519257_24522657_24522775_24527271_24527317_24527524
ENSMUST00000023856.9	chr2	+	1196	5	FSM	ENSMUSG00000023094.15	ENSMUST00000023856.9	1196	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTCTCAGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	19376446	19399787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_19376591_19382972_19383074_19388051_19388129_19398018_19398167_19399061
ENSMUST00000024004.9	chr8	+	1058	6	FSM	ENSMUSG00000023235.15	ENSMUST00000024004.9	1058	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTCTAGTGTGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	4399587	4410020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_4399656_4399771_4399895_4403882_4404001_4404090_4404204_4407592_4407690_4409481
ENSMUST00000024047.12	chr9	+	1596	9	FSM	ENSMUSG00000023277.14	ENSMUST00000024047.12	1596	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGCCTGGGTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	106080306	106092588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ENSMUST00000024056.10	chr4	+	3483	8	FSM	ENSMUSG00000023286.17	ENSMUST00000024056.10	3483	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTGCCTTGTTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	156028306	156044061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_156028608_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUST00000024099.11	chr5	+	2186	5	FSM	ENSMUSG00000023328.15	ENSMUST00000024099.11	2186	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGCAACACGCGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	137286538	137292728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_137286630_137288273_137289364_137289740_137290226_137291429_137291600_137292378
ENSMUST00000024470.13	chr5	+	1596	7	FSM	ENSMUSG00000023707.14	ENSMUST00000024470.13	1596	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTTTGCTATTATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	124250359	124253546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252450_124252709_124252777
ENSMUST00000024518.11	chr15	-	1261	8	FSM	ENSMUSG00000023755.11	ENSMUST00000024518.11	1261	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTGTCTGGAGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	98779361	98775658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98779030
ENSMUST00000024734.8	chr17	+	645	3	FSM	ENSMUSG00000023939.8	ENSMUST00000024734.8	645	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGAGCTGTGATCG	NA	NA	NA	NA	NA	NA	NA	NA	45997247	46009421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_45997354_46006407_46006499_46008973
ENSMUST00000024739.14	chr17	-	2520	11	FSM	ENSMUSG00000023944.15	ENSMUST00000024739.14	2520	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	45884197	45878700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ENSMUST00000024766.7	chr17	-	1195	7	FSM	ENSMUSG00000023971.10	ENSMUST00000024766.7	1195	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	46985181	46978383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ENSMUST00000024873.7	chr17	+	2133	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAAACCAAACAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	74796487	74807272	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
ENSMUST00000024882.8	chr17	+	2838	20	FSM	ENSMUSG00000024078.8	ENSMUST00000024882.8	2838	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGTGATGTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	75024726	75170565	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
ENSMUST00000024909.15	chr17	-	927	9	FSM	ENSMUSG00000024099.16	ENSMUST00000024909.15	927	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAGCTTTATTCGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	66408490	66386435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66407972_66408070_66408409
ENSMUST00000024946.7	chr17	+	1086	7	FSM	ENSMUSG00000024132.7	ENSMUST00000024946.7	1086	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTAGCTCTTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	24645656	24658294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_24645717_24645826_24645914_24652115_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ENSMUST00000024957.7	chr17	-	988	6	FSM	ENSMUSG00000024145.7	ENSMUST00000024957.7	988	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	87332834	87304683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_87304996_87316230_87316340_87327828_87327946_87329286_87329379_87331092_87331342_87332725
ENSMUST00000024963.11	chr17	-	2038	4	FSM	ENSMUSG00000024150.13	ENSMUST00000024963.11	2038	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCGGCTGGATTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	87573363	87561870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87573262
ENSMUST00000025003.10	chr17	-	3000	3	FSM	ENSMUSG00000024176.11	ENSMUST00000025003.10	3000	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTTTTGAGTATTACT	NA	NA	NA	NA	NA	NA	NA	NA	25789660	25784865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_25787056_25787801_25788035_25789083
ENSMUST00000025007.7	chr17	-	1006	5	FSM	ENSMUSG00000024177.10	ENSMUST00000025007.7	1006	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTACTTACTAGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	26314576	26310707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26311127_26312590_26312704_26312832_26312935_26313110_26313245_26314338
ENSMUST00000025014.10	chr17	+	1068	5	FSM	ENSMUSG00000024181.10	ENSMUST00000025014.10	1068	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	26342473	26345587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345244
ENSMUST00000025019.9	chr17	-	1032	6	FSM	ENSMUSG00000073433.12	ENSMUST00000025019.9	1032	6	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGCTGCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	26420324	26418156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26418504_26418586_26418651_26418725_26418803_26418988_26419073_26419164_26419345_26420044
ENSMUST00000025027.10	chr17	-	741	7	FSM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	NA	NA	NA	NA	NA	NA	NA	NA	27158543	27156945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290_27158343_27158424
ENSMUST00000025040.6	chr6	-	390	1	FSM	ENSMUSG00000091845.2	ENSMUST00000025040.6	390	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTGTATTTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	108117470	108117080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_108117100_108117500
ENSMUST00000025045.15	chr17	-	500	4	FSM	ENSMUSG00000024208.17	ENSMUST00000025045.15	500	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTGGAACTCATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	27352890	27341636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_27341815_27344120_27344191_27344857_27344933_27352713
ENSMUST00000025050.13	chr17	-	2223	5	FSM	ENSMUSG00000024213.15	ENSMUST00000025050.13	2223	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTTGTTCCATGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	27842469	27798355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27842060
ENSMUST00000025052.14	chr17	-	522	5	FSM	ENSMUSG00000052146.17	ENSMUST00000025052.14	522	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCACTTGTGTATGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	27854214	27849395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_27849481_27851252_27851331_27853045_27853218_27853299_27853450_27854177
ENSMUST00000025101.10	chr17	+	1354	13	FSM	ENSMUSG00000024253.10	ENSMUST00000025101.10	1354	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATCTAAGTATAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	84933923	84963016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_84934005_84935712_84935831_84939063_84939099_84940946_84941017_84943659_84943749_84950299_84950487_84951532_84951602_84952146_84952225_84954672_84954750_84955073_84955145_84956643_84956742_84957136_84957230_84962728
ENSMUST00000025186.16	chr17	-	2320	7	FSM	ENSMUSG00000024327.17	ENSMUST00000025186.16	2320	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTTGTCTTTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	34250594	34247242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
ENSMUST00000025204.7	chr18	-	1109	4	FSM	ENSMUSG00000024346.7	ENSMUST00000025204.7	1109	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTTGCCTTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	36587577	36536728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_36537514_36565358_36565444_36584132_36584300_36587505
ENSMUST00000025212.8	chr18	-	3026	15	FSM	ENSMUSG00000024354.14	ENSMUST00000025212.8	3026	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTTCTGTGTTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	35760297	35747656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_35748741_35752440_35752706_35754819_35754916_35755339_35755484_35755564_35755695_35755911_35756018_35756503_35756652_35757123_35757281_35757480_35757602_35757734_35757917_35758052_35758121_35758240_35758330_35758860_35759019_35759411_35759547_35760154
ENSMUST00000025215.10	chr18	-	1703	10	FSM	ENSMUSG00000024357.11	ENSMUST00000025215.10	1703	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTCTCTTGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	35631982	35399448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
ENSMUST00000025246.13	chr17	-	961	7	FSM	ENSMUSG00000024387.14	ENSMUST00000025246.13	961	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTCTCCTACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35340262	35335173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340097
ENSMUST00000025293.5	chr18	+	1392	8	FSM	ENSMUSG00000024425.5	ENSMUST00000025293.5	1392	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGTTCTCAATTAGT	NA	NA	NA	NA	NA	NA	NA	NA	38552021	38597892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597313
ENSMUST00000025300.13	chr18	-	4989	9	FSM	ENSMUSG00000024431.16	ENSMUST00000025300.13	4989	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	39622899	39545039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622797
ENSMUST00000025305.16	chr17	-	1079	7	FSM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1513	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCCCTTTGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	36227281	36221270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
ENSMUST00000025357.9	chr18	+	1520	6	FSM	ENSMUSG00000024480.10	ENSMUST00000025357.9	1520	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTTGCCTCCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	46874942	46923893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_46875149_46887437_46887530_46891069_46891182_46912254_46912327_46913727_46913836_46922963
ENSMUST00000025394.14	chr18	+	860	6	FSM	ENSMUSG00000024516.14	ENSMUST00000025394.14	860	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGTCTGCCCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	65933585	65950755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_65933783_65942515_65942626_65945735_65945886_65947908_65948029_65949891_65949950_65950530
ENSMUST00000025419.9	chr18	-	1403	5	FSM	ENSMUSG00000024538.9	ENSMUST00000025419.9	1403	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTGCAAGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	53551187	53539403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_53540138_53542196_53542382_53544058_53544153_53544577_53544692_53550911
ENSMUST00000025420.14	chr18	-	1568	10	FSM	ENSMUSG00000024539.18	ENSMUST00000025420.14	1568	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTGGTTTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	67857658	67798581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
ENSMUST00000025463.14	chr18	+	1650	4	FSM	ENSMUSG00000024571.16	ENSMUST00000025463.14	1650	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAAAGGAGTACACGTT	NA	NA	NA	NA	NA	NA	NA	NA	80250081	80255938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_80250162_80250368_80250559_80253276_80253346_80254627
ENSMUST00000025511.11	chr18	+	597	5	FSM	ENSMUSG00000024608.12	ENSMUST00000025511.11	597	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	60907667	60911618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ENSMUST00000025561.8	chr19	-	1674	13	FSM	ENSMUSG00000024659.16	ENSMUST00000025561.8	1674	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCATTGTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	20368308	20350791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_20351135_20352588_20352712_20354015_20354075_20354970_20355067_20355759_20355854_20357012_20357070_20357703_20357784_20359413_20359505_20360225_20360340_20361120_20361216_20361838_20361948_20362056_20362137_20367975
ENSMUST00000025563.8	chr19	+	929	4	FSM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTGTGATTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	9960009	9962462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_9960348_9961544_9961692_9961923_9962050_9962144
ENSMUST00000025567.9	chr19	-	3150	12	FSM	ENSMUSG00000024665.9	ENSMUST00000025567.9	3150	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTGTAGTTCAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	10079110	10040128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_10041679_10042049_10042176_10042965_10043046_10043615_10043713_10043878_10043977_10047635_10047713_10047927_10047989_10059928_10060055_10066065_10066168_10066271_10066470_10069104_10069216_10078586
ENSMUST00000025568.3	chr19	-	1590	5	FSM	ENSMUSG00000024666.7	ENSMUST00000025568.3	1590	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	10554726	10547841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554447
ENSMUST00000025595.5	chr19	+	3267	4	FSM	ENSMUSG00000024691.14	ENSMUST00000025595.5	3267	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTTTCTTTAGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	12550886	12567126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_12550945_12554453_12554535_12561286_12561487_12564198
ENSMUST00000025651.6	chr19	-	2341	2	FSM	ENSMUSG00000024742.16	ENSMUST00000025651.6	2341	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	10181432	10176501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_10178462_10181051
ENSMUST00000025679.11	chr19	-	1713	7	FSM	ENSMUSG00000024767.12	ENSMUST00000025679.11	1713	7	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTGGCCCATGCATC	NA	NA	NA	NA	NA	NA	NA	NA	7183681	7175566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
ENSMUST00000025704.3	chr19	+	2024	6	FSM	ENSMUSG00000024791.11	ENSMUST00000025704.3	2024	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTGCTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	6135012	6141807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677
ENSMUST00000025706.10	chr4	+	1661	10	FSM	ENSMUSG00000024793.15	ENSMUST00000025706.10	1661	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTCAGTGGGAGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	152200390	152204576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_152200572_152201041_152201181_152201387_152201523_152201834_152202000_152202096_152202152_152202703_152202760_152202857_152202957_152203146_152203185_152203616_152203801_152203967
ENSMUST00000025707.9	chr19	-	1287	8	FSM	ENSMUSG00000024792.10	ENSMUST00000025707.9	1287	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGAAGCAGCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	6134973	6130791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134893
ENSMUST00000025713.12	chr19	-	1471	10	FSM	ENSMUSG00000024799.17	ENSMUST00000025713.12	1471	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	6117872	6112850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
ENSMUST00000025714.9	chr19	+	1145	11	FSM	ENSMUSG00000024800.9	ENSMUST00000025714.9	1145	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTTTAAATTTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	36061130	36082177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ENSMUST00000025740.8	chr19	-	2081	11	FSM	ENSMUSG00000024824.8	ENSMUST00000025740.8	2081	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTGTTCCCCGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	4251635	4245194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ENSMUST00000025743.7	chr19	+	802	7	FSM	ENSMUSG00000024829.13	ENSMUST00000025743.7	802	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGACTTGCTGTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	3333059	3341201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3340976
ENSMUST00000025762.16	chr19	-	1261	3	FSM	ENSMUSG00000024844.16	ENSMUST00000025762.16	1261	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTTCTGTGTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	5417196	5414665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5415187_5415845_5415985_5416595
ENSMUST00000025767.14	chr19	-	1261	6	FSM	ENSMUSG00000024847.16	ENSMUST00000025767.14	1261	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTTGCAGAACTAATC	NA	NA	NA	NA	NA	NA	NA	NA	4171575	4164463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335
ENSMUST00000025779.11	chr19	+	1080	4	FSM	ENSMUSG00000024856.11	ENSMUST00000025779.11	1080	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTTCTGTGTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	4147181	4149017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4147508_4147816_4147918_4148004_4148138_4148497
ENSMUST00000025802.10	chr19	+	787	4	FSM	ENSMUSG00000110949.2	ENSMUST00000025802.10	787	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGGCATCTTCCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	4050579	4052103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4050848_4051195_4051329_4051627_4051706_4051795
ENSMUST00000025818.8	chr19	+	4184	10	FSM	ENSMUSG00000024883.9	ENSMUST00000025818.8	4184	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGCTTGATAACTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	5100860	5107099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5100970_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
ENSMUST00000025823.6	chr19	-	1425	8	FSM	ENSMUSG00000024889.6	ENSMUST00000025823.6	1425	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGTCTTGGAACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	4675668	4672622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220_4675324_4675460
ENSMUST00000025827.10	chr19	+	2613	5	FSM	ENSMUSG00000024896.10	ENSMUST00000025827.10	2613	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCTGCACTCATTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	32463168	32492764	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_32463960_32468737_32468936_32471270_32471369_32475783_32475918_32491372
ENSMUST00000025853.16	chr19	-	992	7	FSM	ENSMUSG00000024914.17	ENSMUST00000025853.16	992	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTTTGGTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5475007	5472838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
ENSMUST00000025867.6	chr19	+	2716	11	FSM	ENSMUSG00000024927.9	ENSMUST00000025867.6	2716	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAGTAGCTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	5687510	5698158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5687870_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
ENSMUST00000025890.10	chr19	-	2586	17	FSM	ENSMUSG00000024941.10	ENSMUST00000025890.10	2586	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	5821429	5808454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809782_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ENSMUST00000025893.7	chr19	-	1286	5	FSM	ENSMUSG00000024944.7	ENSMUST00000025893.7	1286	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGAGCCATTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	6191578	6184412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6184832_6186008_6186090_6187507_6187671_6187759_6187871_6191066
ENSMUST00000025904.12	chr19	-	1262	6	FSM	ENSMUSG00000024953.18	ENSMUST00000025904.12	1262	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTACAGGGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	6887474	6884073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885485_6886826
ENSMUST00000025914.7	chr19	-	1281	7	FSM	ENSMUSG00000024962.14	ENSMUST00000025914.7	1281	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTGTCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	6965019	6959840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6960236_6962728_6962965_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
ENSMUST00000025931.14	chr19	+	2381	12	FSM	ENSMUSG00000024975.14	ENSMUST00000025931.14	2381	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGAGTGCATTTATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	53891729	53918291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_53891920_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53914965_53915077_53915624_53915765_53917513
ENSMUST00000025932.9	chr19	+	3965	9	FSM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTGTGTGTGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	53933310	54021562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_53933445_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ENSMUST00000025979.13	chr19	-	3527	19	FSM	ENSMUSG00000025007.14	ENSMUST00000025979.13	3527	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	40576907	40538700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ENSMUST00000026016.13	chrX	-	1983	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGCTTATATATCC	NA	NA	NA	NA	NA	NA	NA	NA	17438564	17422802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
ENSMUST00000026125.3	chr11	-	3527	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATCACACCTCGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	120489191	120482946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ENSMUST00000026135.15	chr11	+	1820	16	FSM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120563817	120600273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUST00000026139.14	chr11	+	2492	18	FSM	ENSMUSG00000025145.14	ENSMUST00000026139.14	2492	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTCCAGTTCCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	120604750	120611954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609547_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ENSMUST00000026175.9	chr11	+	1047	6	FSM	ENSMUSG00000025175.13	ENSMUST00000026175.9	1047	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCTACTTTTGAGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	121325738	121341317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_121325956_121328098_121328251_121330111_121330204_121330896_121330980_121339707_121339831_121340937
ENSMUST00000026217.11	chr19	-	3502	21	FSM	ENSMUSG00000025199.17	ENSMUST00000026217.11	3502	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTCTACTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	44095919	44061773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ENSMUST00000026221.7	chr19	+	5455	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	44282112	44295303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ENSMUST00000026234.5	chr19	+	1380	5	FSM	ENSMUSG00000025213.12	ENSMUST00000026234.5	1380	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACTGCTGCGGACAAT	NA	NA	NA	NA	NA	NA	NA	NA	45064577	45067728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_45064676_45065102_45065653_45066734_45066896_45066999_45067148_45067305
ENSMUST00000026256.9	chr19	+	1348	4	FSM	ENSMUSG00000025226.12	ENSMUST00000026256.9	1348	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGGTGCATAGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	46316622	46318885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_46316966_46317113_46317268_46317526_46318033_46318540
ENSMUST00000026259.16	chr19	-	1380	4	FSM	ENSMUSG00000025229.16	ENSMUST00000026259.16	1380	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGATGATTCAGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	46136765	46124123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_46125045_46125421_46125625_46125803_46125934_46136639
ENSMUST00000026289.10	chrX	+	962	6	FSM	ENSMUSG00000025260.11	ENSMUST00000026289.10	962	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGCAGTCTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	150784840	150787438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_150784931_150785273_150785439_150786356_150786522_150786648_150786778_150786857_150786967_150787134
ENSMUST00000026296.8	chrX	+	4001	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGAGCACTGCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	149830165	149872517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ENSMUST00000026303.16	chrX	-	1884	6	FSM	ENSMUSG00000025269.17	ENSMUST00000026303.16	1884	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATGTTGAGTGGATAT	NA	NA	NA	NA	NA	NA	NA	NA	149371145	149354503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
ENSMUST00000026328.11	chrX	-	990	7	FSM	ENSMUSG00000025289.16	ENSMUST00000026328.11	990	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTTGCCATTGTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	154121463	154106913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_154107025_154109590_154109626_154111441_154111573_154113298_154113422_154115351_154115469_154117833_154117952_154121108
ENSMUST00000026354.15	chr8	+	1970	13	FSM	ENSMUSG00000025316.17	ENSMUST00000026354.15	1970	13	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGAAAAAAAAAAAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	122677318	122752676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ENSMUST00000026387.11	chr5	-	1548	5	FSM	ENSMUSG00000025337.11	ENSMUST00000026387.11	1548	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTTGCATTTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	130284371	130274571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284050
ENSMUST00000026406.14	chr10	-	1258	5	FSM	ENSMUSG00000025350.16	ENSMUST00000026406.14	1258	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAGGTGTACAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	128755166	128749461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128749806_128750003_128750168_128753748_128754008_128754121_128754462_128755015
ENSMUST00000026407.9	chr10	+	1063	8	FSM	ENSMUSG00000025351.15	ENSMUST00000026407.9	1063	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGGAGATGGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	128745567	128748684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ENSMUST00000026425.13	chr10	-	2432	12	FSM	ENSMUSG00000025364.14	ENSMUST00000026425.13	2432	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTGTTCTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	128401803	128393634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ENSMUST00000026448.10	chr11	-	3193	10	FSM	ENSMUSG00000025384.16	ENSMUST00000026448.10	3193	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	120269590	120260387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269153_120269273_120269367
ENSMUST00000026459.6	chr10	+	1916	10	FSM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGGGCCTTGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	127919141	127926260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ENSMUST00000026469.9	chr10	-	2582	7	FSM	ENSMUSG00000025402.13	ENSMUST00000026469.9	2582	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCCCCCTTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	127502579	127496786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_127497649_127498599_127498792_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
ENSMUST00000026475.15	chr10	+	890	4	FSM	ENSMUSG00000025408.16	ENSMUST00000026475.15	890	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCACTTTTTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	127126642	127132157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_127126761_127129580_127129629_127131189_127131348_127131591
ENSMUST00000026486.13	chr18	-	1674	14	FSM	ENSMUSG00000025420.14	ENSMUST00000026486.13	1674	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCATGGCTCTGGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	77134992	77080894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_77081283_77082089_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099679_77099801_77103697_77103741_77105156_77105324_77106880_77106952_77134869
ENSMUST00000026495.15	chr18	+	2471	12	FSM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGTTGATGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	77861428	77870569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ENSMUST00000026506.5	chr7	+	1504	7	FSM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGCTGTGATTTTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	97345840	97368086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
ENSMUST00000026557.10	chr7	-	2268	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTCTATGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	140437022	140433306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
ENSMUST00000026585.14	chr7	+	1466	8	FSM	ENSMUSG00000025511.16	ENSMUST00000026585.14	1466	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGAAGTTCTTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	141055152	141073340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_141055411_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
ENSMUST00000026595.13	chr8	+	1122	6	FSM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTTTGTATGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	65399836	65421685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849_65416985_65418190_65418294_65421362
ENSMUST00000026649.14	chr11	+	1520	4	FSM	ENSMUSG00000048277.16	ENSMUST00000026649.14	1520	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGCTGGGTGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	117700493	117705109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_117700630_117703284_117703523_117703871_117704012_117704103
ENSMUST00000026666.13	chr11	+	3363	20	FSM	ENSMUSG00000025579.15	ENSMUST00000026666.13	3363	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	119158851	119176280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_119158918_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ENSMUST00000026700.8	chr16	+	1652	5	FSM	ENSMUSG00000025610.8	ENSMUST00000026700.8	1652	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTCTTGCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	87350217	87392224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_87350484_87352789_87352899_87367185_87367248_87378017_87378134_87391125
ENSMUST00000026723.9	chrX	+	1289	9	FSM	ENSMUSG00000025630.9	ENSMUST00000026723.9	1289	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCACTTTTTGAATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	52077013	52110536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52101153_52101172_52105223_52105307_52108981_52109029_52109199_52109277_52109943
ENSMUST00000026743.14	chr9	+	1653	13	FSM	ENSMUSG00000025651.15	ENSMUST00000026743.14	1653	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	108765700	108778691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ENSMUST00000026826.14	chr17	-	2466	7	FSM	ENSMUSG00000025730.15	ENSMUST00000026826.14	2466	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGGCTTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	26138688	26101087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338_26138524_26138625
ENSMUST00000026827.16	chr17	+	1243	6	FSM	ENSMUSG00000025731.17	ENSMUST00000026827.16	1243	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGGGAATACCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	26094047	26096143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634_26095714_26095923
ENSMUST00000026828.7	chr17	-	842	5	FSM	ENSMUSG00000025732.7	ENSMUST00000026828.7	842	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	26087738	26082671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26083014_26083224_26083327_26083567_26083696_26087387_26087518_26087598
ENSMUST00000026832.14	chr17	+	2091	9	FSM	ENSMUSG00000025736.16	ENSMUST00000026832.14	2091	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCTGGTGGATGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	26048016	26050816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26048138_26048213_26048313_26048457_26048507_26048579_26048677_26048758_26048828_26048915_26049036_26049112_26049181_26049273_26049409_26049483
ENSMUST00000026839.5	chrX	-	3699	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTTGTCATCCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	166165745	166129317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ENSMUST00000026841.15	chr5	+	2033	16	FSM	ENSMUSG00000059447.14	ENSMUST00000026841.15	2033	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGTCTCGTTATTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	30360245	30389591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUST00000026887.14	chr2	-	1060	9	FSM	ENSMUSG00000025781.15	ENSMUST00000026887.14	1060	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATTGTAACTTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	10085238	10060826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_10060973_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUST00000026891.5	chr9	+	1053	8	FSM	ENSMUSG00000025785.6	ENSMUST00000026891.5	1053	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTGTTAGCATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	122942279	122965194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_122942388_122947955_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ENSMUST00000026899.4	chr11	+	2023	11	FSM	ENSMUSG00000025792.10	ENSMUST00000026899.4	2023	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGGGGCTGGCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	120382665	120390013	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387933_120388209_120388288_120388745_120388803_120388896
ENSMUST00000026901.12	chr7	+	653	1	FSM	ENSMUSG00000046721.12	ENSMUST00000026901.12	653	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	390	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTACACAGAATAATAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	44974388	44975041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44974400_44975000
ENSMUST00000026976.12	chr5	+	2107	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTAGTCCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	139238078	139255806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
ENSMUST00000026988.11	chr13	+	1046	4	FSM	ENSMUSG00000025870.11	ENSMUST00000026988.11	1046	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCAGCAGGCTCAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	54722827	54728941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_54723091_54723562_54723762_54726605_54726782_54728533
ENSMUST00000027103.7	chr1	+	4486	12	FSM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTACAGTTTGATACTT	NA	NA	NA	NA	NA	NA	NA	NA	63769772	63793814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ENSMUST00000027153.6	chr1	-	1916	11	FSM	ENSMUSG00000026003.6	ENSMUST00000027153.6	1916	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCCCTGGGGAATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	66902436	66869997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
ENSMUST00000027186.12	chr1	-	6189	16	FSM	ENSMUSG00000026028.13	ENSMUST00000027186.12	6189	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTGTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	59012589	58939607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_58943342_58945864_58945971_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
ENSMUST00000027215.12	chr1	-	1272	8	FSM	ENSMUSG00000026049.12	ENSMUST00000027215.12	1272	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTTGTTTTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	44141551	44125772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44140626_44140683_44141059_44141118_44141487
ENSMUST00000027249.12	chr1	-	2975	7	FSM	ENSMUSG00000026080.14	ENSMUST00000027249.12	2975	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATCTGGGTTTGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	38937091	38902947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_38905117_38907061_38907168_38910681_38910917_38913029_38913122_38923430_38923563_38935017_38935138_38936970
ENSMUST00000027279.12	chr1	-	2838	6	FSM	ENSMUSG00000026107.12	ENSMUST00000027279.12	2838	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATAGGAGTAACAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	51517558	51508646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51516983
ENSMUST00000027338.4	chr1	-	683	3	FSM	ENSMUSG00000026154.5	ENSMUST00000027338.4	683	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	891	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTATTTTATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	24044737	24035019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_24035442_24042237_24042388_24044626
ENSMUST00000027357.12	chr1	-	1479	10	FSM	ENSMUSG00000026171.13	ENSMUST00000027357.12	1479	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGTGGTATGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	74640556	74632906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_74633562_74633718_74633854_74634367_74634461_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
ENSMUST00000027446.11	chr1	+	2231	7	FSM	ENSMUSG00000026240.13	ENSMUST00000027446.11	2231	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86514821	86534222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ENSMUST00000027488.11	chr1	+	2902	12	FSM	ENSMUSG00000026270.12	ENSMUST00000027488.11	2902	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTAGTCTTGTTCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	92862097	92875663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874696_92874936_92874983_92875230
ENSMUST00000027581.7	chr1	+	2691	2	FSM	ENSMUSG00000026343.7	ENSMUST00000027581.7	2691	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCCCTCACCACTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	125604731	125801599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_125605930_125800106
ENSMUST00000027634.13	chr1	-	569	4	FSM	ENSMUSG00000026385.17	ENSMUST00000027634.13	569	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTTGTCTGGGTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	120048808	120041009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_120041264_120044115_120044179_120047624_120047743_120048674
ENSMUST00000027671.12	chr1	+	1064	14	FSM	ENSMUSG00000026414.14	ENSMUST00000027671.12	1064	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATGGAATAGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	135768612	135779998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_135768651_135769638_135769650_135773292_135773383_135773635_135773672_135774459_135774494_135775446_135775511_135775718_135775836_135776548_135776627_135777087_135777199_135778116_135778126_135778448_135778559_135779089_135779181_135779433_135779475_135779764
ENSMUST00000027730.6	chr1	+	1495	3	FSM	ENSMUSG00000026459.6	ENSMUST00000027730.6	1495	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATCTGCAATGATATTA	NA	NA	NA	NA	NA	NA	NA	NA	134217726	134220286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_134218265_134218830_134218913_134219411
ENSMUST00000027781.7	chr1	+	471	4	FSM	ENSMUSG00000026500.7	ENSMUST00000027781.7	471	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTTTACATGAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	178146694	178150258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_178146774_178149309_178149425_178149506_178149571_178150045
ENSMUST00000027802.9	chr1	+	1580	7	FSM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTCTCACTGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	180731857	180735653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
ENSMUST00000027853.6	chr1	+	1025	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACCCCCCACTTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	165288605	165308783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
ENSMUST00000027863.13	chr1	-	2580	6	FSM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	NA	NA	NA	NA	NA	NA	NA	164285924	164264677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329
ENSMUST00000027878.14	chr1	-	4952	4	FSM	ENSMUSG00000026586.17	ENSMUST00000027878.14	4952	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTCTTTTGTTATAATA	NA	NA	NA	NA	NA	NA	NA	NA	163141279	163072687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_163075966_163085329_163085512_163089408_163089585_163139963
ENSMUST00000027945.6	chr1	-	1196	10	FSM	ENSMUSG00000026632.18	ENSMUST00000027945.6	1196	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTATTTTTAAAAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	190795102	190778038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_190778518_190781478_190781557_190785056_190785170_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421_190793455_190794997
ENSMUST00000027970.14	chr1	-	1374	6	FSM	ENSMUSG00000026659.14	ENSMUST00000027970.14	1374	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTGTTAGATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	170713109	170701756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708598_170712635
ENSMUST00000027986.5	chr2	-	2411	15	FSM	ENSMUSG00000026672.12	ENSMUST00000027986.5	2411	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGTTATCTGATTTA	NA	NA	NA	NA	NA	NA	NA	NA	5068749	5025454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_5026040_5026133_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ENSMUST00000028034.15	chr2	-	2897	11	FSM	ENSMUSG00000026707.16	ENSMUST00000028034.15	2897	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATTTTGAAAAATATCAT	NA	NA	NA	NA	NA	NA	NA	NA	15054091	14999941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
ENSMUST00000028049.13	chr1	-	2748	21	FSM	ENSMUSG00000026721.17	ENSMUST00000028049.13	2748	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGGGAAAAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	160620516	160084774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_160084837_160085012_160085106_160169605_160169735_160219751_160219794_160269392_160269537_160270760_160270887_160281320_160281396_160299567_160299682_160454784_160454936_160472877_160472972_160509610_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117_160563329_160566465_160566659_160568321_160568502_160620305
ENSMUST00000028063.7	chr2	+	1652	5	FSM	ENSMUSG00000026730.13	ENSMUST00000028063.7	1652	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTGTTTTCCACTTAT	NA	NA	NA	NA	NA	NA	NA	NA	12928910	13006425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_12929010_12982970_12983429_12985103_12985370_12999560_12999632_13005667
ENSMUST00000028083.6	chr2	-	1160	8	FSM	ENSMUSG00000026750.7	ENSMUST00000028083.6	1160	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	38534099	38478047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
ENSMUST00000028100.13	chr18	-	3965	14	FSM	ENSMUSG00000024240.14	ENSMUST00000028100.13	3965	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCAGTGGTCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	6490856	6435952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ENSMUST00000028105.13	chr2	-	2344	15	FSM	ENSMUSG00000026767.13	ENSMUST00000028105.13	2344	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCACTTTTACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	12424281	12352073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
ENSMUST00000028200.9	chr2	-	1401	5	FSM	ENSMUSG00000026849.19	ENSMUST00000028200.9	1401	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGGCTTTGTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	30857945	30850638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_30851210_30853486_30853615_30853705_30853882_30857101_30857368_30857685
ENSMUST00000028209.15	chr2	+	2251	8	FSM	ENSMUSG00000026856.15	ENSMUST00000028209.15	2251	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGCATACATTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	30282265	30290541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
ENSMUST00000028238.15	chr2	-	3081	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGCATTATTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	35091132	35070216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ENSMUST00000028278.14	chr2	+	1541	12	FSM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCGAGGTCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	61542037	61630720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ENSMUST00000028293.12	chr2	-	2031	9	FSM	ENSMUSG00000026927.18	ENSMUST00000028293.12	2031	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	26279316	26272813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26279160
ENSMUST00000028329.13	chr2	+	3121	7	FSM	ENSMUSG00000026955.14	ENSMUST00000028329.13	3121	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAGGCCCTATTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	25262332	25268225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_25263011_25263427_25263530_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
ENSMUST00000028382.13	chr2	+	1559	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTTGTTTGGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	80469159	80489246	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ENSMUST00000028384.5	chr2	+	1632	4	FSM	ENSMUSG00000027001.11	ENSMUST00000028384.5	1632	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCTTCAAGTGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	80447388	80462005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_80447951_80451537_80451585_80454551_80454705_80461135
ENSMUST00000028475.9	chr2	-	1912	3	FSM	ENSMUSG00000027079.16	ENSMUST00000028475.9	1912	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTATGATTCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	84557694	84553465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_84554562_84555872_84556501_84557506
ENSMUST00000028553.4	chr2	+	1109	2	FSM	ENSMUSG00000027133.4	ENSMUST00000028553.4	1109	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTCTGGTAGGAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	112092270	112093614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_112092423_112092657
ENSMUST00000028554.4	chr2	+	2275	14	FSM	ENSMUSG00000027134.5	ENSMUST00000028554.4	2275	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGAGGGTGGAATCATT	NA	NA	NA	NA	NA	NA	NA	NA	112069812	112077456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_112070403_112071795_112071939_112072269_112072491_112072820_112072934_112073045_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
ENSMUST00000028610.10	chr2	-	2613	13	FSM	ENSMUSG00000027187.11	ENSMUST00000028610.10	2613	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCTGACTTTGGAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	103315505	103284193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
ENSMUST00000028619.5	chr2	-	1902	11	FSM	ENSMUSG00000027195.11	ENSMUST00000028619.5	1902	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTTTTGATAGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	93988309	93863033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
ENSMUST00000028650.9	chr2	+	1392	11	FSM	ENSMUSG00000027222.15	ENSMUST00000028650.9	1392	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGGCTCTGTGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	92205650	92211562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_92206021_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
ENSMUST00000028694.12	chr2	+	1862	11	FSM	ENSMUSG00000027257.14	ENSMUST00000028694.12	1862	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCGTCTTTTGATAGC	NA	NA	NA	NA	NA	NA	NA	NA	91087157	91095023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_91087272_91090208_91090273_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
ENSMUST00000028721.8	chr2	-	2613	13	FSM	ENSMUSG00000053675.9	ENSMUST00000028721.8	2613	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGTATGGATTTTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	120916322	120876591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_120877014_120877161_120877296_120878853_120879015_120879308_120879675_120882895_120883136_120883219_120883324_120883975_120884115_120901212_120901391_120901968_120902098_120905583_120905703_120907270_120907517_120907969_120908165_120916142
ENSMUST00000028730.13	chr2	-	2935	6	FSM	ENSMUSG00000027274.17	ENSMUST00000028730.13	2935	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATACAATCCTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	136733302	136715699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136733198
ENSMUST00000028752.8	chr2	-	4339	25	FSM	ENSMUSG00000027291.16	ENSMUST00000028752.8	4339	25	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCTTGAGCCTCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	120183606	120146941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ENSMUST00000028803.14	chr2	+	1241	8	NIC	ENSMUSG00000027331.16	novel	4602	9	NA	NA	21	484	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATATTCTGACTAACAC	NA	NA	NA	NA	NA	NA	NA	NA	118644734	118665123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118662033_118662109_118664480
ENSMUST00000028892.11	chr2	-	1616	12	FSM	ENSMUSG00000027406.14	ENSMUST00000028892.11	1616	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	130126467	130121228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ENSMUST00000028938.7	chr2	-	860	3	FSM	ENSMUSG00000027447.7	ENSMUST00000028938.7	860	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGAGTTGTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	148717496	148713641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_148713964_148714736_148714851_148717072
ENSMUST00000028969.9	chr2	+	3654	18	FSM	ENSMUSG00000027469.17	ENSMUST00000028969.9	3654	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTCTTGTTGTCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	152689914	152736574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_152690218_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUST00000028972.9	chr2	-	1273	5	FSM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGTTGTCACCCACC	NA	NA	NA	NA	NA	NA	NA	NA	152857347	152850809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857153
ENSMUST00000028997.8	chr2	-	1905	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAGTACGTGGGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	172212426	172198115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212314
ENSMUST00000029005.4	chr2	+	2173	9	FSM	ENSMUSG00000027502.12	ENSMUST00000029005.4	2173	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGGGTTGGTTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	172282475	172311828	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308193_172308252_172308348_172308445_172310515
ENSMUST00000029014.16	chr2	+	1768	4	FSM	ENSMUSG00000027510.18	ENSMUST00000029014.16	1768	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAAGGTGGTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	172863694	172876518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_172864064_172864584_172864709_172865119_172865175_172875298
ENSMUST00000029071.9	chr3	+	2299	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTATCTTTTGGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	14706786	14728062	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
ENSMUST00000029078.9	chr3	+	1788	7	FSM	ENSMUSG00000027562.13	ENSMUST00000029078.9	1788	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCTGATTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	14951487	14965830	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
ENSMUST00000029082.9	chr2	-	914	7	FSM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	179684226	179678166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
ENSMUST00000029085.9	chr2	+	1510	5	FSM	ENSMUSG00000027569.16	ENSMUST00000029085.9	1510	5	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTAAAAAAAAAAAAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	180224504	180228080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_180224749_180225193_180225316_180226198_180226281_180226589_180226665_180227093
ENSMUST00000029105.12	chr2	+	2293	7	FSM	ENSMUSG00000027582.17	ENSMUST00000029105.12	2293	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGACTCAGCTGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	181006720	181022587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_181007170_181007437_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167
ENSMUST00000029120.14	chr2	+	1802	10	FSM	ENSMUSG00000027593.16	ENSMUST00000029120.14	1802	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTGAGGTGGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	154633052	154709164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ENSMUST00000029140.12	chr2	+	1597	4	FSM	ENSMUSG00000027611.13	ENSMUST00000029140.12	1597	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCCATACCCTTTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	155593036	155597391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_155593385_155595264_155595523_155596159_155596448_155596688
ENSMUST00000029142.15	chr2	-	1500	6	FSM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGCTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	155668845	155661751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
ENSMUST00000029147.16	chr2	-	2051	13	FSM	ENSMUSG00000027618.18	ENSMUST00000029147.16	2051	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTTGAATTTTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	155986106	155965558	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
ENSMUST00000029188.8	chr2	+	1719	5	FSM	ENSMUSG00000027656.8	ENSMUST00000029188.8	1719	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTTTTGTATCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	163662808	163675066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_163663030_163663208_163663302_163667060_163667278_163670771_163671030_163674136
ENSMUST00000029222.8	chr3	-	3606	20	FSM	ENSMUSG00000027676.12	ENSMUST00000029222.8	3606	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAATGTTTCTTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	33898450	33866510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_33867350_33868338_33868416_33868501_33868679_33868803_33868945_33869560_33869668_33870060_33870221_33870976_33871101_33873956_33874166_33875525_33875664_33879539_33879705_33880603_33880799_33884173_33884307_33884805_33884910_33886676_33886869_33890864_33890994_33891088_33891182_33891954_33892114_33893226_33893374_33895217_33895338_33898253
ENSMUST00000029266.14	chr3	-	1731	13	FSM	ENSMUSG00000027712.14	ENSMUST00000029266.14	1731	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTAGGTTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	36530043	36503071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_36503556_36504460_36504584_36504786_36504846_36506335_36506432_36507619_36507714_36511141_36511199_36511607_36511688_36514591_36514683_36516029_36516144_36518116_36518212_36519399_36519485_36529578_36529610_36529721
ENSMUST00000029316.16	chr3	-	1300	11	FSM	ENSMUSG00000027752.16	ENSMUST00000029316.16	1300	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCCTTACGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	54642814	54636098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ENSMUST00000029387.15	chr3	+	2299	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	58433241	58464922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ENSMUST00000029388.10	chr3	+	1970	2	FSM	ENSMUSG00000027811.10	ENSMUST00000029388.10	1970	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCGTTTCTTTAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	79536385	79540127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_79536664_79538435
ENSMUST00000029402.15	chr3	-	3150	6	FSM	ENSMUSG00000027822.17	ENSMUST00000029402.15	3150	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAAGCTGTTTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	63872189	63849750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_63850838_63851986_63852203_63854989_63855108_63855492_63855678_63861234_63861426_63870836
ENSMUST00000029433.9	chr3	+	2743	21	FSM	ENSMUSG00000027843.14	ENSMUST00000029433.9	2743	21	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATGCTTCAAAGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	103767592	103819563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_103767807_103780960_103781070_103781296_103781374_103781495_103781592_103781980_103782020_103783048_103783121_103783221_103783282_103783910_103784054_103784620_103784688_103786893_103786972_103789365_103789453_103792637_103792715_103792842_103793658_103795827_103795912_103796050_103796173_103797571_103797600_103809429_103809508_103810685_103810802_103812471_103812503_103816696_103816775_103819291
ENSMUST00000029477.11	chr3	+	3431	10	FSM	ENSMUSG00000040322.11	ENSMUST00000029477.11	3431	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTTTTCTAATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	109030464	109075773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_109030704_109043527_109043655_109056798_109056887_109062309_109062422_109064162_109064322_109065813_109065961_109066663_109066772_109068532_109068701_109070734_109070886_109073641
ENSMUST00000029480.9	chr3	-	3026	6	FSM	ENSMUSG00000027881.15	ENSMUST00000029480.9	3026	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	108819043	108810122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ENSMUST00000029542.12	chr3	-	4337	30	FSM	ENSMUSG00000027933.12	ENSMUST00000029542.12	4337	30	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	90340836	90298702	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ENSMUST00000029549.16	chr3	+	2230	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGGCTTGACTTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	89986846	90008208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ENSMUST00000029552.13	chr3	+	1080	6	FSM	ENSMUSG00000027942.18	ENSMUST00000029552.13	1080	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	89960143	89966404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048
ENSMUST00000029565.11	chr3	-	1022	6	FSM	ENSMUSG00000027953.14	ENSMUST00000029565.11	1022	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	89177877	89175552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177258_89177368_89177447_89177692
ENSMUST00000029566.9	chr3	-	1480	5	FSM	ENSMUSG00000027954.10	ENSMUST00000029566.9	1480	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCTGCCCCACCATG	NA	NA	NA	NA	NA	NA	NA	NA	89186952	89179039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89179912_89180078_89180130_89180263_89180330_89183436_89183733_89186757
ENSMUST00000029575.12	chr3	+	3000	5	FSM	ENSMUSG00000027963.15	ENSMUST00000029575.12	3000	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGGTGCTCTGGTGACGTG	NA	NA	NA	NA	NA	NA	NA	NA	115801110	115822666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_115801532_115804270_115804346_115817655_115818084_115818973_115819045_115820661
ENSMUST00000029588.10	chr3	-	2121	13	FSM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTTTTATTTACA	NA	NA	NA	NA	NA	NA	NA	NA	127346998	127330362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
ENSMUST00000029610.9	chr3	-	1789	8	FSM	ENSMUSG00000027984.9	ENSMUST00000029610.9	1789	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCCTGTCTTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	131065750	131027067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131038808_131038936_131042064_131042223_131043451_131043581_131065524
ENSMUST00000029643.15	chr3	-	1271	7	FSM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTTATTGAACGGAACCTA	NA	NA	NA	NA	NA	NA	NA	NA	129625045	129618560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624766
ENSMUST00000029650.9	chr3	+	3101	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGTAGATGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	132797600	132816749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
ENSMUST00000029679.4	chr3	-	849	3	FSM	ENSMUSG00000028044.7	ENSMUST00000029679.4	849	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTGGTTATAAGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	89325690	89322778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89323271_89323580_89323709_89325461
ENSMUST00000029698.15	chr3	-	668	4	FSM	ENSMUSG00000028062.16	ENSMUST00000029698.15	668	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCACCTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88460331	88457125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460102
ENSMUST00000029707.13	chr3	+	1630	8	FSM	ENSMUSG00000028069.17	ENSMUST00000029707.13	1630	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTCTTTGTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	87950414	87963297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_87950487_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
ENSMUST00000029708.8	chr3	-	908	6	FSM	ENSMUSG00000028070.8	ENSMUST00000029708.8	908	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	87965802	87963826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_87964084_87964292_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965633
ENSMUST00000029717.4	chr3	-	1946	6	FSM	ENSMUSG00000028076.13	ENSMUST00000029717.4	1946	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCCAGAGGTTTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	86906748	86903140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_86903909_86903996_86904094_86904644_86904924_86905378_86905658_86905939_86906213_86906498
ENSMUST00000029805.13	chr3	-	3963	18	FSM	ENSMUSG00000028158.15	ENSMUST00000029805.13	3963	18	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTTTGTCTTGGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	137837138	137795614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_137796991_137798339_137798511_137800719_137800845_137808847_137809076_137810427_137810550_137810703_137810802_137812862_137813072_137814716_137814930_137817404_137817513_137818220_137818390_137819816_137819975_137820896_137821048_137821762_137821903_137822167_137822285_137824073_137824182_137829493_137829638_137830818_137831007_137837000
ENSMUST00000029838.11	chr3	-	1661	9	FSM	ENSMUSG00000028187.11	ENSMUST00000029838.11	1661	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCTGTGTGAGCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	146227184	146211710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ENSMUST00000029839.11	chr3	-	1920	15	FSM	ENSMUSG00000028188.14	ENSMUST00000029839.11	1920	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGACTGGCCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	146205508	146162957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_146163260_146168939_146169011_146171663_146171752_146173860_146173960_146175379_146175559_146181010_146181137_146181948_146182058_146186882_146186965_146187521_146187616_146192954_146193175_146193266_146193321_146194401_146194520_146195565_146195673_146199426_146199599_146205409
ENSMUST00000029915.6	chr4	-	1588	4	FSM	ENSMUSG00000028251.6	ENSMUST00000029915.6	1588	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCATGTATTTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	21767212	21757381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_21758476_21759369_21759530_21759622_21759794_21767049
ENSMUST00000029970.14	chr4	-	2039	8	FSM	ENSMUSG00000028293.15	ENSMUST00000029970.14	2039	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGCAGTTACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	34687438	34663256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34675029_34675183_34675471_34675632_34683284_34683463_34687243
ENSMUST00000029972.4	chr4	-	786	3	FSM	ENSMUSG00000028295.15	ENSMUST00000029972.4	786	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGAGTTTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34778423	34768663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_34769148_34771257_34771415_34778278
ENSMUST00000029999.15	chr4	+	1724	14	FSM	ENSMUSG00000028318.15	ENSMUST00000029999.15	1724	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCCTTTCATGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	45018661	45032365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45024478_45024550_45025145_45025219_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ENSMUST00000030015.6	chr4	-	1527	5	FSM	ENSMUSG00000028331.13	ENSMUST00000030015.6	1527	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTCTGAGCTTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	46389437	46379863	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_46380311_46382058_46382686_46386093_46386252_46387567_46387743_46389317
ENSMUST00000030051.6	chr4	-	1051	5	FSM	ENSMUSG00000028367.6	ENSMUST00000030051.6	1051	5	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1087	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATGAGTGTGACTGAT	NA	NA	NA	NA	NA	NA	NA	NA	57956411	57943372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_57943968_57945146_57945213_57950838_57950899_57951796_57951902_57956186
ENSMUST00000030090.4	chr4	-	1206	12	FSM	ENSMUSG00000028393.11	ENSMUST00000030090.4	1206	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	62438155	62427405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
ENSMUST00000030103.9	chr4	-	741	2	FSM	ENSMUSG00000028398.9	ENSMUST00000030103.9	741	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTAGTTCTTTTAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	75196542	75195590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_75196007_75196217
ENSMUST00000030122.5	chr4	+	397	4	FSM	ENSMUSG00000028415.5	ENSMUST00000030122.5	397	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGTGGCCCAGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	40920051	40931395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_40920156_40924923_40924965_40929078_40929192_40931256
ENSMUST00000030125.5	chr4	-	1295	7	FSM	ENSMUSG00000028416.14	ENSMUST00000030125.5	1295	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTTGGCTCTGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	40948243	40936400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
ENSMUST00000030127.13	chr4	+	2862	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGGTATTCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	53826044	53862019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
ENSMUST00000030152.13	chr4	-	1114	7	FSM	ENSMUSG00000028441.13	ENSMUST00000030152.13	1114	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGCTGTGTCCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	41517333	41505008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_41505169_41505567_41505655_41507098_41507329_41507520_41507594_41508516_41508630_41511431_41511577_41517027
ENSMUST00000030154.7	chr4	+	845	3	FSM	ENSMUSG00000028443.7	ENSMUST00000030154.7	845	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGATGCTTTCTTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	41465150	41480926	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_41465181_41477513_41477648_41480245
ENSMUST00000030158.11	chr4	-	973	7	FSM	ENSMUSG00000028447.12	ENSMUST00000030158.11	973	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACAGTGGGGCATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	41723170	41714797	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_41715260_41715395_41715456_41716395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723034
ENSMUST00000030184.12	chr4	-	2175	9	FSM	ENSMUSG00000028464.17	ENSMUST00000030184.12	2175	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGGCCCTTTAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	43523464	43514710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_43516004_43518229_43518300_43518401_43518465_43519002_43519079_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522801_43523240
ENSMUST00000030185.5	chr9	-	1797	9	FSM	ENSMUSG00000032366.16	ENSMUST00000030185.5	1797	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGGAAGTTAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	66956544	66936129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUST00000030192.5	chr4	-	610	5	FSM	ENSMUSG00000028470.11	ENSMUST00000030192.5	610	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTATCCCTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	43656466	43654228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_43654412_43654512_43654586_43654715_43654821_43654905_43655047_43656358
ENSMUST00000030202.14	chr4	+	2320	5	FSM	ENSMUSG00000028480.15	ENSMUST00000030202.14	2320	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCCTCTAATGCGATT	NA	NA	NA	NA	NA	NA	NA	NA	43957400	43979118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_43957774_43968111_43968221_43968571_43968676_43970499_43970578_43977462
ENSMUST00000030206.10	chr4	+	1405	9	FSM	ENSMUSG00000028483.14	ENSMUST00000030206.10	1405	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGATTCTTTTCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	83335960	83371577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277
ENSMUST00000030279.15	chr4	+	3178	11	FSM	ENSMUSG00000028550.16	ENSMUST00000030279.15	3178	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTTTTGTTTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	99082170	99148024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_99082690_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99117802_99123303_99123424_99146633
ENSMUST00000030288.14	chr4	-	2871	24	FSM	ENSMUSG00000028559.18	ENSMUST00000030288.14	2871	24	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	109059469	108918851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ENSMUST00000030292.12	chr4	-	952	7	FSM	ENSMUSG00000028563.17	ENSMUST00000030292.12	952	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTGACCTGTTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	98271483	98243606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_98243918_98246154_98246285_98253799_98253874_98258728_98258821_98263156_98263251_98268854_98268929_98271306
ENSMUST00000030313.9	chr4	-	2107	6	FSM	ENSMUSG00000028578.9	ENSMUST00000030313.9	2107	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGATATCTTTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	94445033	94388317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_94389654_94409298_94409373_94437355_94437432_94438658_94438744_94439501_94439703_94444698
ENSMUST00000030317.14	chr4	-	1817	6	FSM	ENSMUSG00000028583.15	ENSMUST00000030317.14	1817	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGCCAACATTTGACACT	NA	NA	NA	NA	NA	NA	NA	NA	143026134	142994000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002778_143025758
ENSMUST00000030399.7	chr4	+	2593	7	FSM	ENSMUSG00000028646.17	ENSMUST00000030399.7	2593	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTTGTGTGATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	123811238	123830790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_123811561_123813641_123813846_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
ENSMUST00000030404.5	chr4	-	1188	10	FSM	ENSMUSG00000028651.13	ENSMUST00000030404.5	1188	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	123033744	123020907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033694
ENSMUST00000030434.5	chr4	+	2525	8	FSM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTTTGTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	135648045	135667622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384
ENSMUST00000030439.15	chr4	-	3029	15	FSM	ENSMUSG00000028677.20	ENSMUST00000030439.15	3029	15	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTGTGTTTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	117354249	117128659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353879
ENSMUST00000030452.13	chr4	+	1524	9	FSM	ENSMUSG00000028689.15	ENSMUST00000030452.13	1524	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTGTTCTCTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	116565705	116572296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_116566292_116566436_116566471_116566678_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116572036
ENSMUST00000030455.15	chr4	-	1420	9	FSM	ENSMUSG00000028692.15	ENSMUST00000030455.15	1420	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTGTGCCTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	116508877	116493706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
ENSMUST00000030456.14	chr4	-	2520	16	FSM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCTTTGATGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	116485138	116458805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528_116484627_116485086
ENSMUST00000030477.4	chr4	+	2884	4	FSM	ENSMUSG00000028709.4	ENSMUST00000030477.4	2884	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTGGGAAGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	115685288	115693382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_115685439_115688419_115688887_115690829_115691033_115691318
ENSMUST00000030490.13	chr4	+	5285	17	FSM	ENSMUSG00000028718.17	ENSMUST00000030490.13	5285	17	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTGACTTCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	114857355	114900393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ENSMUST00000030535.4	chr4	-	846	4	FSM	ENSMUSG00000028755.4	ENSMUST00000030535.4	846	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTTTGTTCTTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	138095303	138065838	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_138066312_138070817_138070876_138078494_138078607_138095100
ENSMUST00000030563.6	chr4	+	1551	5	FSM	ENSMUSG00000028779.17	ENSMUST00000030563.6	1551	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTTCTTGACTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	130001348	130021927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
ENSMUST00000030581.10	chr4	-	2063	11	FSM	ENSMUSG00000028789.17	ENSMUST00000030581.10	2063	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAACCCTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	128856232	128825814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855876_128855998_128856093
ENSMUST00000030586.15	chr4	-	879	6	FSM	ENSMUSG00000028795.16	ENSMUST00000030586.15	879	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTCGGTGCTCTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	129517740	129513066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129513240_129514249_129514273_129514475_129514670_129514776_129514944_129516392_129516581_129517606
ENSMUST00000030636.11	chr4	+	1060	5	FSM	ENSMUSG00000028832.12	ENSMUST00000030636.11	1060	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTCTGTTCAGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	134195630	134201154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200642
ENSMUST00000030651.9	chr4	-	743	3	FSM	ENSMUSG00000028843.9	ENSMUST00000030651.9	743	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGTGGTGTCCGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	133856100	133854716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_133855118_133855228_133855397_133855926
ENSMUST00000030660.9	chr4	+	1336	5	FSM	ENSMUSG00000028847.9	ENSMUST00000030660.9	1336	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGTTTTCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	126156117	126169676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_126156331_126166470_126166569_126166767_126166868_126167682_126167866_126168934
ENSMUST00000030690.12	chr4	-	1264	10	FSM	ENSMUSG00000028873.17	ENSMUST00000030690.12	1264	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTGTGCTTGAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	124830666	124812903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_124813152_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ENSMUST00000030734.5	chr4	+	1820	17	FSM	ENSMUSG00000028902.5	ENSMUST00000030734.5	1820	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTATGAATTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	124608568	124626253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ENSMUST00000030738.8	chr4	-	1603	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCCTTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	124587393	124571952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ENSMUST00000030769.7	chr5	+	1785	13	FSM	ENSMUSG00000028932.9	ENSMUST00000030769.7	1785	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCTTCCAGATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	21990280	22008785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_21990516_21991647_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
ENSMUST00000030771.12	chr5	-	2133	17	FSM	ENSMUSG00000029014.15	ENSMUST00000030771.12	2133	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTATAGTCATCATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	21990249	21962264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ENSMUST00000030773.12	chr5	-	3247	3	FSM	ENSMUSG00000028933.12	ENSMUST00000030773.12	3247	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATATTTCATATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	25910823	25894809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_25897827_25903248_25903331_25910675
ENSMUST00000030779.10	chr4	+	1425	9	FSM	ENSMUSG00000028937.15	ENSMUST00000030779.10	1425	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAAGCCTAGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	152270662	152356304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_152270843_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ENSMUST00000030800.13	chr5	-	1893	10	FSM	ENSMUSG00000028959.15	ENSMUST00000030800.13	1893	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	24650285	24646036	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
ENSMUST00000030805.14	chr4	-	908	7	FSM	ENSMUSG00000028964.15	ENSMUST00000030805.14	908	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	150994383	150981589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ENSMUST00000030842.8	chr4	+	1817	7	FSM	ENSMUSG00000028990.14	ENSMUST00000030842.8	1817	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTCTATGAAAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	149569750	149581125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ENSMUST00000030914.4	chr4	-	1596	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTCGTCTACACGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	155170830	155158566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ENSMUST00000030942.13	chr4	+	764	4	FSM	ENSMUSG00000029066.13	ENSMUST00000030942.13	764	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTATTTCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	155887977	155893288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155888200_155888289_155888401_155891364_155891443_155892935
ENSMUST00000030968.7	chr5	+	1616	9	FSM	ENSMUSG00000029089.9	ENSMUST00000030968.7	1616	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTAGTTCTACATATAT	NA	NA	NA	NA	NA	NA	NA	NA	48529670	48546187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48534416_48534508_48536671_48536807_48537465_48537574_48539128_48539210_48545444
ENSMUST00000031005.11	chr5	-	4325	21	FSM	ENSMUSG00000029122.12	ENSMUST00000031005.11	4325	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTCTTGCCTGTTTCGG	NA	NA	NA	NA	NA	NA	NA	NA	37494238	37456514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_37457845_37458155_37458268_37458901_37458996_37460528_37460656_37464556_37464669_37466375_37466521_37467504_37467712_37468875_37469087_37470772_37470883_37471702_37471916_37473668_37473768_37475506_37475656_37476232_37476450_37477579_37477739_37479393_37479532_37481042_37481142_37482180_37482266_37483681_37483930_37485805_37485890_37490235_37490362_37493978
ENSMUST00000031008.13	chr5	+	1471	11	FSM	ENSMUSG00000029125.15	ENSMUST00000031008.13	1471	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTATTGCAGTCAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	38196576	38294161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293698
ENSMUST00000031131.11	chr5	+	1177	9	FSM	ENSMUSG00000029223.13	ENSMUST00000031131.11	1177	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTATTTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	66833433	66844577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_66833666_66833778_66833791_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ENSMUST00000031160.16	chr5	+	2482	9	FSM	ENSMUSG00000029247.18	ENSMUST00000031160.16	2482	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTCGCTGTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	77099153	77115352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ENSMUST00000031170.10	chr5	-	3192	19	FSM	ENSMUSG00000029253.13	ENSMUST00000031170.10	3192	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCATCTTGTCTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	86213442	86159882	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
ENSMUST00000031243.15	chr5	+	1410	7	FSM	ENSMUSG00000029304.15	ENSMUST00000031243.15	1410	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTGGTGGTGTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	104582983	104588916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUST00000031254.9	chr5	-	3193	10	FSM	ENSMUSG00000029312.13	ENSMUST00000031254.9	3193	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTTAATGTCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	104059125	104009915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104058981
ENSMUST00000031255.15	chr5	+	2884	13	FSM	ENSMUSG00000029314.15	ENSMUST00000031255.15	2884	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGCATTATTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	100994084	101046965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_100994228_100994520_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
ENSMUST00000031262.9	chr5	-	1743	7	FSM	ENSMUSG00000029319.9	ENSMUST00000031262.9	1743	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	NA	NA	NA	NA	NA	NA	NA	NA	100822150	100802588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100815757_100815925_100821854
ENSMUST00000031264.12	chr5	-	744	5	FSM	ENSMUSG00000029322.13	ENSMUST00000031264.12	744	5	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	100720111	100701590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_100701855_100704345_100704462_100707617_100707743_100710490_100710629_100720010
ENSMUST00000031268.8	chr5	+	1420	7	FSM	ENSMUSG00000029326.14	ENSMUST00000031268.8	1420	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTTCATACAGACGT	NA	NA	NA	NA	NA	NA	NA	NA	100187902	100216619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657_100215801_100216154
ENSMUST00000031318.6	chr5	+	1575	4	FSM	ENSMUSG00000029371.8	ENSMUST00000031318.6	1575	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATGTTGTCTCTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	90907236	90909483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_90907420_90907547_90907684_90907825_90907910_90908311
ENSMUST00000031423.10	chr5	-	4486	20	FSM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGAGAAAAATAACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	122640288	122594402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ENSMUST00000031481.13	chr5	-	1563	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031481.13	1563	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCCTATTTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	110928525	110921532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928419
ENSMUST00000031531.14	chr5	-	883	3	FSM	ENSMUSG00000029551.14	ENSMUST00000031531.14	883	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAGACATCATGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	139812640	139809346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_139809829_139811882_139812120_139812476
ENSMUST00000031598.11	chr5	+	4322	20	FSM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTATTCCTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	120750803	120766657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ENSMUST00000031613.11	chr5	-	1185	4	FSM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	143846657	143839521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846398
ENSMUST00000031617.13	chr5	+	1270	7	FSM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTGACTATAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	121342543	121347304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ENSMUST00000031625.15	chr5	+	1632	10	FSM	ENSMUSG00000029621.15	ENSMUST00000031625.15	1632	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTTTCTTTATACTCT	NA	NA	NA	NA	NA	NA	NA	NA	145020639	145045571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043854_145043946_145045186
ENSMUST00000031637.8	chr6	-	468	4	FSM	ENSMUSG00000029632.8	ENSMUST00000031637.8	468	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGTGTCACTATTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	11907449	11900371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_11900591_11905200_11905262_11906018_11906080_11907322
ENSMUST00000031670.10	chr6	+	919	2	FSM	ENSMUSG00000032766.10	ENSMUST00000031670.10	919	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGTGACTTAAGACGGC	NA	NA	NA	NA	NA	NA	NA	NA	4003903	4008445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_4004412_4008034
ENSMUST00000031678.10	chr6	-	2490	9	FSM	ENSMUSG00000029669.15	ENSMUST00000031678.10	2490	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGTTTGCGTATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	21852514	21771393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_21772936_21795576_21795721_21799877_21799986_21806237_21806313_21835386_21835523_21836411_21836495_21851008_21851145_21852010_21852167_21852404
ENSMUST00000031680.10	chr6	+	3800	12	FSM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGCTGAGTGTTCGAT	NA	NA	NA	NA	NA	NA	NA	NA	21949569	21976037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_21949793_21950036_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ENSMUST00000031728.5	chr5	-	881	2	FSM	ENSMUSG00000029715.6	ENSMUST00000031728.5	881	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTCGAATGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	137500780	137499700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_137500342_137500540
ENSMUST00000031971.13	chr6	+	1063	6	FSM	ENSMUSG00000029911.15	ENSMUST00000031971.13	1063	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGACATGTTTTATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	40448348	40455521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856
ENSMUST00000032065.15	chr6	-	4295	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	86374136	86362987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
ENSMUST00000032135.6	chr6	-	1262	2	FSM	ENSMUSG00000030055.17	ENSMUST00000032135.6	1262	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACATTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	87788761	87770950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_87771780_87788328
ENSMUST00000032143.8	chr6	+	3633	10	FSM	ENSMUSG00000030062.8	ENSMUST00000032143.8	3633	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTATGCTTGTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	88061463	88082286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
ENSMUST00000032168.7	chr6	-	3172	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCAGAAAGCTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	88495887	88480560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ENSMUST00000032172.14	chr6	-	1121	8	FSM	ENSMUSG00000030086.17	ENSMUST00000032172.14	1121	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCACCCAGTCACTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	89572634	89360132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89444371_89444456_89544568_89544714_89546324_89546395_89551349_89551573_89572440
ENSMUST00000032183.6	chr6	+	2903	12	FSM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTCGTTTGCTGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	91450684	91465445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_91450881_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ENSMUST00000032191.16	chr6	-	2593	9	FSM	ENSMUSG00000030101.16	ENSMUST00000032191.16	2593	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTTCACTTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	108162543	108083988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_108085548_108095580_108095641_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150392_108152948_108153123_108162253
ENSMUST00000032216.7	chr6	-	1149	5	FSM	ENSMUSG00000030122.13	ENSMUST00000032216.7	1149	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTCCTGCTTTCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	124894909	124890643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124894522
ENSMUST00000032220.15	chr6	-	1817	8	FSM	ENSMUSG00000030127.16	ENSMUST00000032220.15	1817	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124942411	124935778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942247
ENSMUST00000032264.9	chr6	+	1820	4	FSM	ENSMUSG00000030161.9	ENSMUST00000032264.9	1820	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGCCTCTTTCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	129510122	129519309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_129510500_129514453_129514533_129515532_129515652_129518064
ENSMUST00000032272.13	chr6	-	4184	8	FSM	ENSMUSG00000030168.14	ENSMUST00000032272.13	4184	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTGTGTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	119394665	119330110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119394380
ENSMUST00000032307.12	chr6	-	767	5	FSM	ENSMUSG00000030188.13	ENSMUST00000032307.12	767	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTAGAATAGGTATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	131270207	131261350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131270034
ENSMUST00000032309.13	chr6	-	1853	10	FSM	ENSMUSG00000030189.16	ENSMUST00000032309.13	1853	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGTAACTAGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	131365401	131341817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ENSMUST00000032370.13	chr6	-	2112	16	FSM	ENSMUSG00000030243.17	ENSMUST00000032370.13	2112	16	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCTAAAGTTACATTT	NA	NA	NA	NA	NA	NA	NA	NA	142332762	142296067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_142296272_142308531_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ENSMUST00000032372.7	chr6	+	2818	5	FSM	ENSMUSG00000030245.11	ENSMUST00000032372.7	2818	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	142332946	142349584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347268
ENSMUST00000032383.14	chr6	+	4431	3	FSM	ENSMUSG00000030255.14	ENSMUST00000032383.14	4431	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGGTGTTGAGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	145879847	145910949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_145880098_145901320_145901408_145906855
ENSMUST00000032409.15	chr6	-	1496	12	FSM	ENSMUSG00000030272.16	ENSMUST00000032409.15	1496	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCGTTTGCTCAAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	113320945	113311084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_113311370_113311474_113311593_113313134_113313223_113313318_113313398_113314153_113314267_113315071_113315148_113315240_113315368_113316245_113316385_113316467_113316543_113317252_113317385_113318828_113318944_113320796
ENSMUST00000032441.14	chr6	+	2459	13	FSM	ENSMUSG00000030301.18	ENSMUST00000032441.14	2459	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTGTCATGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	147377368	147534110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_147377558_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
ENSMUST00000032489.8	chr6	-	2107	10	FSM	ENSMUSG00000030339.8	ENSMUST00000032489.8	2107	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGGGTTTTATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	125290848	125283533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_125284435_125284892_125285110_125286156_125286183_125286421_125286530_125289005_125289086_125289232_125289330_125289714_125289874_125289956_125290083_125290352_125290450_125290552
ENSMUST00000032492.9	chr6	-	1228	8	FSM	ENSMUSG00000030342.9	ENSMUST00000032492.9	1228	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	125471754	125437228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUST00000032503.12	chr6	-	1405	9	FSM	ENSMUSG00000030352.16	ENSMUST00000032503.12	1405	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTAGCTCTCTGATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	128120523	127940869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344_128060445_128120476
ENSMUST00000032597.12	chr7	+	1106	5	FSM	ENSMUSG00000030432.13	ENSMUST00000032597.12	1106	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCATGTCCTTTATATT	NA	NA	NA	NA	NA	NA	NA	NA	4795872	4798065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797182_4797416
ENSMUST00000032726.14	chr7	+	908	5	FSM	ENSMUSG00000078681.11	ENSMUST00000032726.14	908	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACGACAACCCAGAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	65343155	65351650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_65343318_65344890_65345076_65347443_65347619_65348839_65348916_65351340
ENSMUST00000032728.9	chr7	+	3192	19	FSM	ENSMUSG00000030515.10	ENSMUST00000032728.9	3192	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCGGTATGTTCCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	65294645	65341839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_65294963_65296000_65296070_65297225_65297417_65302007_65302132_65305431_65305554_65308607_65308726_65310866_65310932_65312048_65312128_65313620_65313768_65314628_65314728_65325711_65325879_65327743_65327907_65332514_65332653_65333555_65333634_65333809_65333911_65336185_65336291_65338626_65338700_65339715_65339831_65340918
ENSMUST00000032747.7	chr7	+	1510	4	FSM	ENSMUSG00000030532.7	ENSMUST00000032747.7	1510	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAAGGCTTCTTAAATC	NA	NA	NA	NA	NA	NA	NA	NA	79992851	79996462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_79992998_79993286_79993343_79993463_79993705_79995395
ENSMUST00000032775.12	chr7	-	1817	6	FSM	ENSMUSG00000030556.14	ENSMUST00000032775.12	1817	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTTTGTTCTGGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	67294955	67244146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_67245480_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ENSMUST00000032808.6	chr7	-	1466	4	FSM	ENSMUSG00000030587.6	ENSMUST00000032808.6	1466	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGGCTCTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	28947891	28945985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28947160_28947321_28947391_28947552_28947666_28947781
ENSMUST00000032818.13	chr7	+	1958	7	FSM	ENSMUSG00000030598.16	ENSMUST00000032818.13	1958	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	28416228	28437569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763
ENSMUST00000032823.5	chr7	-	2611	8	FSM	ENSMUSG00000030602.14	ENSMUST00000032823.5	2611	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTATGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	28267662	28258245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458
ENSMUST00000032842.13	chr7	+	1596	9	FSM	ENSMUSG00000030613.14	ENSMUST00000032842.13	1596	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTGTAAATGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	92210356	92231502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
ENSMUST00000032844.7	chr7	-	799	5	FSM	ENSMUSG00000030615.13	ENSMUST00000032844.7	799	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAACATTAAAATACTT	NA	NA	NA	NA	NA	NA	NA	NA	90106437	90099907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_90100144_90100750_90100866_90101914_90102109_90104631_90104728_90106279
ENSMUST00000032882.9	chr7	+	683	3	FSM	ENSMUSG00000030647.9	ENSMUST00000032882.9	683	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCCTTTCCTGGTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	97049209	97057009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_97049565_97056072_97056217_97056825
ENSMUST00000032887.4	chr7	-	914	6	FSM	ENSMUSG00000030652.12	ENSMUST00000032887.4	914	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGGTTTTCTTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	118132579	118124284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_118124518_118125046_118125116_118126559_118126700_118127526_118127642_118128781_118128961_118132401
ENSMUST00000032899.12	chr7	+	1479	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	115692535	115704445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
ENSMUST00000032910.13	chr7	+	766	7	FSM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTGTGTTCATGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	126810779	126813470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126810936_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ENSMUST00000032915.8	chr7	-	2115	14	FSM	ENSMUSG00000030677.9	ENSMUST00000032915.8	2115	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGAGCCTGGTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	126641643	126626902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ENSMUST00000032926.12	chr7	-	941	6	FSM	ENSMUSG00000060538.15	ENSMUST00000032926.12	941	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTGTAAGGTACTTAC	NA	NA	NA	NA	NA	NA	NA	NA	126497448	126485391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197_126496400_126497395
ENSMUST00000032927.14	chr7	+	1400	7	FSM	ENSMUSG00000030688.16	ENSMUST00000032927.14	1400	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTCTTTGTGCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	100970319	100995515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_100970560_100970920_100971241_100991704_100991853_100992390_100992495_100993123_100993242_100994841_100994895_100995098
ENSMUST00000032949.14	chr7	-	1660	11	FSM	ENSMUSG00000030707.16	ENSMUST00000032949.14	1660	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAGACTCCGGTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	126303988	126298944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126299158_126299428_126299645_126299755_126299814_126299911_126300058_126300163_126300269_126300461_126300582_126300689_126300875_126300961_126301092_126301177_126301301_126302147_126302347_126303823
ENSMUST00000032961.4	chr7	-	829	3	FSM	ENSMUSG00000030717.10	ENSMUST00000032961.4	829	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGGCGTGTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	126224848	126222420	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126222752_126224061_126224206_126224494
ENSMUST00000033008.10	chr7	-	1201	10	FSM	ENSMUSG00000030751.19	ENSMUST00000033008.10	1201	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCAAGTTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	113875353	113863840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ENSMUST00000033074.8	chr7	-	748	3	FSM	ENSMUSG00000096145.3	ENSMUST00000033074.8	748	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTAGCATATGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	127494789	127492234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_127492664_127493676_127493787_127494580
ENSMUST00000033096.16	chr7	-	2111	13	FSM	ENSMUSG00000030824.18	ENSMUST00000033096.16	2111	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTGCCCTCTTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	45159750	45142531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_45143374_45143540_45143626_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
ENSMUST00000033131.12	chr7	+	1119	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCTGTCCTGCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	101555110	101561110	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
ENSMUST00000033133.12	chr7	-	880	5	FSM	ENSMUSG00000030844.12	ENSMUST00000033133.12	880	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTAGTCATTTCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	128019897	127975344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_127975767_127990687_127990832_128004893_128004981_128006082_128006202_128019789
ENSMUST00000033210.13	chr7	+	1484	5	FSM	ENSMUSG00000030917.14	ENSMUST00000033210.13	1484	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTTTTCTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	119701575	119720209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_119701739_119703852_119704053_119714608_119714778_119715442_119715582_119719396
ENSMUST00000033283.10	chr7	+	3997	19	FSM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGTGGCTATGAACGGC	NA	NA	NA	NA	NA	NA	NA	NA	102090901	102118978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ENSMUST00000033292.14	chr7	+	1201	7	FSM	ENSMUSG00000030990.19	ENSMUST00000033292.14	1201	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCTGAGGTTCACTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	101872275	101886970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
ENSMUST00000033430.3	chrX	+	1158	2	FSM	ENSMUSG00000031104.3	ENSMUST00000033430.3	1158	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACGTGGCTTTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	47608161	47619109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_47608736_47618525
ENSMUST00000033458.3	chrX	+	1022	8	FSM	ENSMUSG00000031125.3	ENSMUST00000033458.3	1022	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGCAAATAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	55181931	55198858	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_55181986_55183330_55183457_55183770_55183835_55184104_55184140_55192435_55192554_55193247_55193348_55198014_55198114_55198432
ENSMUST00000033489.8	chrX	+	1339	3	FSM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCTCCTGTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	7594677	7597303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_7595002_7595954_7596173_7596506
ENSMUST00000033490.13	chrX	-	3658	10	FSM	ENSMUSG00000031150.14	ENSMUST00000033490.13	3658	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTGAGTCTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	7607580	7597952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7607450
ENSMUST00000033509.15	chrX	-	1743	5	FSM	ENSMUSG00000031168.15	ENSMUST00000033509.15	1743	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGAGATATTTAATTACT	NA	NA	NA	NA	NA	NA	NA	NA	8059751	8051567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_8052073_8052882_8053014_8053121_8053159_8056317_8056676_8059039
ENSMUST00000033543.14	chrX	-	992	3	FSM	ENSMUSG00000090110.9	ENSMUST00000033543.14	992	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	74460171	74448451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_74448825_74453151_74453220_74459620
ENSMUST00000033621.8	chrX	-	3172	7	FSM	ENSMUSG00000031266.8	ENSMUST00000033621.8	3172	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTATCATTTGTAACC	NA	NA	NA	NA	NA	NA	NA	NA	133501874	133488897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
ENSMUST00000033683.8	chrX	-	975	7	FSM	ENSMUSG00000031320.10	ENSMUST00000033683.8	975	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	101233000	101228546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
ENSMUST00000033713.11	chrX	-	1026	4	FSM	ENSMUSG00000031347.13	ENSMUST00000033713.11	1026	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCATTCTTTAAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	71960462	71957309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293
ENSMUST00000033717.9	chrX	-	2320	7	FSM	ENSMUSG00000031352.11	ENSMUST00000033717.9	2320	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTAGAGTGATTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	168103276	168094525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168103110
ENSMUST00000033734.14	chrX	+	1785	5	FSM	ENSMUSG00000031367.16	ENSMUST00000033734.14	1785	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTGGTGTGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	162692137	162716355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162715128
ENSMUST00000033737.15	chrX	-	1380	10	FSM	ENSMUSG00000031371.15	ENSMUST00000033737.15	1380	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCCTTCGGACTACT	NA	NA	NA	NA	NA	NA	NA	NA	72502650	72480920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_72481172_72489415_72489531_72490533_72490744_72491565_72491663_72491797_72491957_72492416_72492509_72496604_72496667_72498472_72498541_72501579_72501696_72502440
ENSMUST00000033763.15	chrX	-	962	8	FSM	ENSMUSG00000031388.15	ENSMUST00000033763.15	962	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGGGTATGCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	72965550	72960478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_72960802_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ENSMUST00000033770.13	chrX	-	1739	3	FSM	ENSMUSG00000031393.17	ENSMUST00000033770.13	1739	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTAGAGTTTCGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	73129296	73078893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_73080101_73080587_73080939_73129115
ENSMUST00000033775.9	chrX	-	2525	12	FSM	ENSMUSG00000031402.13	ENSMUST00000033775.9	2525	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCCAGTCCAAGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	74174622	74153338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_74154450_74155532_74155608_74155804_74156008_74157191_74157273_74157839_74157921_74159661_74159769_74161361_74161559_74165040_74165110_74167501_74167588_74168976_74169056_74169342_74169487_74174330
ENSMUST00000033824.8	chr8	+	2229	9	FSM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGTGTCCTTCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	13209160	13225338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
ENSMUST00000033839.9	chr8	-	793	4	FSM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTATGCTCTGTCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	13940268	13934793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_13935202_13935665_13935882_13937759_13937827_13940166
ENSMUST00000033900.7	chr8	-	1392	2	FSM	ENSMUSG00000031504.7	ENSMUST00000033900.7	1392	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTTCTTGGGAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	11528710	11503517	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_11504527_11528327
ENSMUST00000033913.11	chr8	-	1249	7	FSM	ENSMUSG00000031516.12	ENSMUST00000033913.11	1249	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCTGCCTCAATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	34575950	34557576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_34557997_34559664_34559808_34560782_34560831_34562037_34562127_34564342_34564449_34573495_34573561_34575572
ENSMUST00000033938.7	chr8	-	1201	14	FSM	ENSMUSG00000031536.7	ENSMUST00000033938.7	1201	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTTAACAAATGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	23143434	23118141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_23118386_23120358_23120499_23121470_23121536_23127083_23127171_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329
ENSMUST00000033941.7	chr8	+	2525	14	FSM	ENSMUSG00000031538.7	ENSMUST00000033941.7	2525	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGGTGCATATCCATG	NA	NA	NA	NA	NA	NA	NA	NA	23247762	23272860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_23247845_23257095_23257184_23258461_23258505_23261709_23261848_23262221_23262333_23262651_23262827_23263632_23263725_23265580_23265756_23266806_23266893_23268118_23268315_23268428_23268566_23268670_23268812_23270441_23270606_23271963
ENSMUST00000033983.6	chr8	-	1902	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGTCTTGAGAATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	31658792	31649490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ENSMUST00000034004.10	chr8	+	1548	6	FSM	ENSMUSG00000031595.10	ENSMUST00000034004.10	1548	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAAGTACTTGTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	41379269	41443822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_41379463_41391126_41391425_41429987_41430140_41438570_41438865_41441841_41441982_41443351
ENSMUST00000034012.10	chr8	-	2615	7	FSM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGTGACTGATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	40964795	40945580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
ENSMUST00000034022.4	chr8	-	1178	4	FSM	ENSMUSG00000031609.4	ENSMUST00000034022.4	1178	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGCTTCAGCCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	57940894	57935740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_57936085_57938075_57938175_57938543_57938670_57940285
ENSMUST00000034026.10	chr8	+	1683	7	FSM	ENSMUSG00000031613.10	ENSMUST00000034026.10	1683	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAATTGCCTATTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	56747619	56774078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_56747748_56747973_56748098_56751390_56751498_56760628_56760726_56770784_56770862_56772027_56772192_56773092
ENSMUST00000034097.8	chr8	-	2530	10	FSM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTGCTTTTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	96615175	96590761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUST00000034141.18	chr8	+	2859	15	FSM	ENSMUSG00000047866.21	ENSMUST00000034141.18	2859	15	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATTCTGGTCTCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	87350671	87443259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
ENSMUST00000034184.12	chr8	+	2450	3	FSM	ENSMUSG00000031737.12	ENSMUST00000034184.12	2450	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGCCACTCATTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	93084376	93088084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_93085058_93086164_93086571_93086721
ENSMUST00000034215.8	chr8	+	549	3	FSM	ENSMUSG00000031765.9	ENSMUST00000034215.8	549	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	869	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTTGGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	94905709	94906955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_94905967_94906450_94906517_94906729
ENSMUST00000034228.16	chr8	+	2063	6	FSM	ENSMUSG00000031776.18	ENSMUST00000034228.16	2063	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGATGTGCATTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	95393227	95401053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_95393530_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
ENSMUST00000034234.15	chr8	+	1789	9	FSM	ENSMUSG00000031782.16	ENSMUST00000034234.15	1789	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTGTTTTGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	95564948	95581523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95577228_95578478_95578584_95579742_95579899_95580232_95580287_95580741
ENSMUST00000034249.8	chr8	-	1295	6	FSM	ENSMUSG00000031796.8	ENSMUST00000034249.8	1295	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	96161497	96146876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96151244_96151325_96161115
ENSMUST00000034276.13	chr8	+	745	5	FSM	ENSMUSG00000031818.13	ENSMUST00000034276.13	745	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	121394960	121400946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_121395095_121396047_121396122_121399463_121399632_121399959_121400092_121400709
ENSMUST00000034285.14	chr8	-	1596	4	FSM	ENSMUSG00000031827.14	ENSMUST00000034285.14	1596	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGAGTTGGGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	120567283	120535960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_120537095_120549392_120549551_120566880_120566964_120567062
ENSMUST00000034313.13	chr8	+	1155	5	FSM	ENSMUSG00000031851.15	ENSMUST00000034313.13	1155	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGAGTCCTTGTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	126460941	126474974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126471974_126472185_126474436
ENSMUST00000034343.5	chr8	+	1616	5	FSM	ENSMUSG00000031875.8	ENSMUST00000034343.5	1616	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1674	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGAGTGCGCCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	105067225	105074304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363
ENSMUST00000034369.10	chr8	-	1311	8	FSM	ENSMUSG00000031897.10	ENSMUST00000034369.10	1311	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTAAACAGAAGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	106665076	106662370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663497_106663614_106663872_106664014_106664125_106664224_106664310_106664399_106664586
ENSMUST00000034415.6	chr9	+	1148	7	FSM	ENSMUSG00000031939.17	ENSMUST00000034415.6	1148	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTAAGTGCTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	15217509	15223400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223204
ENSMUST00000034431.3	chr8	-	3878	3	FSM	ENSMUSG00000031953.3	ENSMUST00000034431.3	3878	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGCGTTGGGAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	112603382	112589669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_112593129_112596219_112596391_112603134
ENSMUST00000034432.7	chr8	-	1178	7	FSM	ENSMUSG00000031954.7	ENSMUST00000034432.7	1178	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	112580923	112495122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ENSMUST00000034453.6	chr8	-	1446	7	FSM	ENSMUSG00000031972.6	ENSMUST00000034453.6	1446	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAACTGTGTGTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124621490	124618507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_124618892_124618967_124619150_124619282_124619475_124619571_124619734_124619884_124620210_124620307_124620449_124621430
ENSMUST00000034512.7	chr9	-	2526	4	FSM	ENSMUSG00000032014.7	ENSMUST00000034512.7	2526	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAGGCAAAAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	43151208	43132531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_43134137_43135193_43135375_43136172_43136308_43150603
ENSMUST00000034537.8	chr9	-	2095	11	FSM	ENSMUSG00000032038.8	ENSMUST00000034537.8	2095	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGGGGCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35028169	34957871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
ENSMUST00000034539.12	chr9	-	1274	6	FSM	ENSMUSG00000032040.16	ENSMUST00000034539.12	1274	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTGTAGCCCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	35087357	35035703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_35036141_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
ENSMUST00000034552.8	chr9	-	875	4	FSM	ENSMUSG00000032051.10	ENSMUST00000034552.8	875	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGTGTGTTTGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	51874846	51854605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_51854950_51859876_51860007_51868372_51868498_51874570
ENSMUST00000034562.9	chr9	+	946	3	FSM	ENSMUSG00000032060.11	ENSMUST00000034562.9	946	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATTGAAAATCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	50664206	50667843	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_50664778_50665811_50665935_50667591
ENSMUST00000034570.7	chr9	-	1046	6	FSM	ENSMUSG00000032067.7	ENSMUST00000034570.7	1046	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTTTTCAGGATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	50439951	50432916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_50433637_50433828_50433900_50436022_50436080_50436561_50436585_50438169_50438250_50439856
ENSMUST00000034689.8	chr9	+	3843	4	FSM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTTGTCAGAGGGATC	NA	NA	NA	NA	NA	NA	NA	NA	20563390	20577880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_20563494_20566657_20566877_20573593_20573705_20574470
ENSMUST00000034698.9	chr9	-	1378	4	FSM	ENSMUSG00000032180.12	ENSMUST00000034698.9	1378	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	21421548	21418850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21419688_21420226_21420411_21420549_21420648_21421289
ENSMUST00000034756.15	chr9	+	1447	13	FSM	ENSMUSG00000032231.15	ENSMUST00000034756.15	1447	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTTGCCTTTGCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	69360901	69399077	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_69361022_69371741_69371807_69374572_69374673_69383334_69383430_69386959_69387074_69390255_69390347_69391061_69391142_69392479_69392540_69393751_69393846_69394834_69394931_69395336_69395396_69396933_69397057_69398727
ENSMUST00000034783.6	chr9	+	1159	3	FSM	ENSMUSG00000032251.13	ENSMUST00000034783.6	1159	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTGTATACTGAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	82711858	82729073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_82712393_82728351_82728483_82728579
ENSMUST00000034808.12	chr9	-	1043	3	FSM	ENSMUSG00000032271.14	ENSMUST00000034808.12	1043	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGCTCACTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	48516453	48503176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_48503663_48514653_48514862_48516104
ENSMUST00000034820.16	chr9	+	4646	20	FSM	ENSMUSG00000032280.17	ENSMUST00000034820.16	4646	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTGATTGTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	61280139	61325769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ENSMUST00000034836.16	chr9	+	3215	26	FSM	ENSMUSG00000032295.16	ENSMUST00000034836.16	3215	26	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTATAATGGTGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	57038053	57049487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046137_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ENSMUST00000034843.9	chr9	+	5770	22	FSM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTCGTTGTGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	54771072	54819814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ENSMUST00000034846.7	chr9	-	4152	3	FSM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGATCTAGCTTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	57169895	57160399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_57161613_57163668_57166424_57169711
ENSMUST00000034856.15	chr9	-	1780	8	FSM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTCAGCCTTTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	57460046	57451538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
ENSMUST00000034859.15	chr9	+	2112	7	FSM	ENSMUSG00000032309.16	ENSMUST00000034859.15	2112	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	55116208	55131717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ENSMUST00000034866.9	chr9	-	1392	12	FSM	ENSMUSG00000032314.15	ENSMUST00000034866.9	1392	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACTATCAGAAACATGC	NA	NA	NA	NA	NA	NA	NA	NA	55419527	55361791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
ENSMUST00000034876.10	chr9	-	1716	7	FSM	ENSMUSG00000032324.12	ENSMUST00000034876.10	1716	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTACATTTTAATTATT	NA	NA	NA	NA	NA	NA	NA	NA	56068341	56043167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068083
ENSMUST00000034878.12	chr9	-	3658	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGTGCTGTTTATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	79700712	79676224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ENSMUST00000034881.8	chr9	-	659	4	FSM	ENSMUSG00000032330.8	ENSMUST00000034881.8	659	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTCAGCAGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	79667160	79662642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_79662888_79663558_79663644_79665771_79665862_79666921
ENSMUST00000034902.12	chr9	-	870	7	FSM	ENSMUSG00000057933.11	ENSMUST00000034902.12	870	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTCATAAGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	78254440	78238299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_78238532_78239368_78239501_78241042_78241185_78244840_78244974_78245926_78245979_78249111_78249221_78254370
ENSMUST00000034920.11	chr9	-	2310	22	FSM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	63285184	63071049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ENSMUST00000034928.12	chr9	-	1824	10	FSM	ENSMUSG00000032366.16	ENSMUST00000034928.12	1824	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTGGTCCTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	66956491	66929874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66955405_66955532_66956300
ENSMUST00000034929.7	chr9	-	2031	6	FSM	ENSMUSG00000032370.9	ENSMUST00000034929.7	2031	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGGCACTTTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	66882766	66862674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66863483_66874960_66875127_66877863_66878219_66878457_66878649_66881999_66882067_66882322
ENSMUST00000034965.8	chr9	+	1228	3	FSM	ENSMUSG00000032398.8	ENSMUST00000034965.8	1228	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTGCCAGCAACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	64086555	64090414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_64086703_64087780_64087871_64089423
ENSMUST00000035009.16	chr9	-	993	5	FSM	ENSMUSG00000032436.18	ENSMUST00000035009.16	993	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1061	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCCTTATTGCATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	114610917	114585903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
ENSMUST00000035034.10	chr9	-	1197	8	FSM	ENSMUSG00000032459.10	ENSMUST00000035034.10	1197	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	682	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGTAATTCGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	98483713	98470782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_98470980_98472087_98472197_98474607_98474754_98476125_98476210_98476722_98476867_98478872_98479038_98480187_98480352_98483525
ENSMUST00000035105.7	chr9	+	1938	7	FSM	ENSMUSG00000032518.7	ENSMUST00000035105.7	1938	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCATACTCACCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	119956754	119961435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ENSMUST00000035113.11	chr9	+	577	3	FSM	ENSMUSG00000032526.12	ENSMUST00000035113.11	577	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCCCATGTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	121539394	121541987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_121539538_121539704_121539782_121541630
ENSMUST00000035116.12	chr9	-	2320	15	FSM	ENSMUSG00000032527.14	ENSMUST00000035116.12	2320	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTGTTGTTTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	100916951	100864084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
ENSMUST00000035227.8	chr9	+	2133	6	FSM	ENSMUSG00000032606.8	ENSMUST00000035227.8	2133	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	865	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTCAGCTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	108167627	108173697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108167862_108170534_108170712_108171129_108171244_108171644_108171717_108172087_108172193_108172266
ENSMUST00000035230.7	chr9	+	2082	9	FSM	ENSMUSG00000032607.13	ENSMUST00000035230.7	2082	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTCTAGCTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	108174068	108179501	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108174225_108174326_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
ENSMUST00000035276.5	chr7	-	676	3	FSM	ENSMUSG00000042462.5	ENSMUST00000035276.5	676	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCGATTTTTCTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	126859881	126856130	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126856509_126858529_126858641_126859694
ENSMUST00000035283.11	chr11	-	2450	17	FSM	ENSMUSG00000040667.12	ENSMUST00000035283.11	2450	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	70860788	70833907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835407_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUST00000035295.6	chr1	-	2048	3	FSM	ENSMUSG00000038633.6	ENSMUST00000035295.6	2048	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGTGTCACTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	182110369	182103336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_182104459_182106540_182107284_182110186
ENSMUST00000035301.7	chr4	+	1135	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAGCAGAATTTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	63463008	63468987	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_63463237_63466821_63466923_63468181
ENSMUST00000035325.15	chr1	-	3348	12	FSM	ENSMUSG00000033684.15	ENSMUST00000035325.15	3348	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGTTTGACTTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	155688635	155653903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442_155679544_155688271
ENSMUST00000035426.7	chr16	+	1611	2	FSM	ENSMUSG00000079737.5	ENSMUST00000035426.7	1611	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTACTTTGGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	13489883	13496249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_13489943_13494697
ENSMUST00000035493.14	chr6	+	2147	4	FSM	ENSMUSG00000042079.14	ENSMUST00000035493.14	2147	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGCACAGCTTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	117883755	117902580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_117883801_117894430_117894560_117896059_117896121_117900668
ENSMUST00000035597.10	chr10	+	2869	15	FSM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTCCTGTCCTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	80691108	80704542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702495_80703233
ENSMUST00000035604.13	chr11	-	4922	28	NIC	ENSMUSG00000037275.15	novel	4919	28	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	NA	NA	NA	NA	1392	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTCTCGTTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	58059365	58012115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ENSMUST00000035748.14	chrX	+	2303	6	FSM	ENSMUSG00000033460.15	ENSMUST00000035748.14	2303	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	133618737	133622666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_133618800_133619118_133619211_133619474_133619568_133619668_133619742_133620375_133620475_133620782
ENSMUST00000035991.8	chr1	+	3313	11	FSM	ENSMUSG00000041684.12	ENSMUST00000035991.8	3313	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAATCCTATGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	44158321	44183670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_44158531_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ENSMUST00000036127.9	chr8	+	1739	13	FSM	ENSMUSG00000033249.11	ENSMUST00000036127.9	1739	13	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTCTCTCTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	105996432	106002477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_105996629_105997178_105997288_105997400_105997529_105997619_105997745_105998005_105998082_105998216_105998282_105998737_105998841_105999091_105999217_105999337_105999566_106001277_106001384_106001479_106001546_106001674_106001745_106002135
ENSMUST00000036252.7	chr3	-	1536	10	FSM	ENSMUSG00000028063.16	ENSMUST00000036252.7	1536	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGCCCTGGCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88400619	88390512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88400543
ENSMUST00000036320.12	chr11	+	1790	9	FSM	ENSMUSG00000034175.14	ENSMUST00000036320.12	1790	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5049438	5056091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055180_5055314_5055432_5055718_5055799
ENSMUST00000036355.13	chr16	-	5483	18	FSM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGTGGAAACACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	45664741	45566605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ENSMUST00000036374.6	chr11	+	724	7	NNC	ENSMUSG00000038845.12	novel	1735	7	NA	NA	45	-329	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	826	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGCCATCATCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	95557889	95570534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_95557966_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ENSMUST00000036387.8	chr10	+	1484	3	FSM	ENSMUSG00000033208.8	ENSMUST00000036387.8	1484	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCTTACCCATCTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	76089686	76096993	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_76089793_76092860_76093007_76095761
ENSMUST00000036437.13	chr5	+	3431	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATCTTTATTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	96357973	96414568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ENSMUST00000036497.16	chr12	-	3378	11	FSM	ENSMUSG00000002997.16	ENSMUST00000036497.16	3378	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCCAAGCATGGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	32111295	32008474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_32010522_32012997_32013137_32013896_32013963_32015113_32015189_32017211_32017314_32022048_32022203_32025917_32026025_32037878_32037963_32043729_32043783_32088620_32088657_32110780
ENSMUST00000036682.9	chr14	-	2812	18	FSM	ENSMUSG00000033885.16	ENSMUST00000036682.9	2812	18	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTAGCTTTGCTAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	14371562	14304655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_14305839_14314427_14314488_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
ENSMUST00000036742.14	chr11	+	1401	4	FSM	ENSMUSG00000039208.16	ENSMUST00000036742.14	1401	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTTTTTACAAAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	121593236	121607132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_121593622_121598555_121598942_121605522_121605583_121606562
ENSMUST00000036805.7	chr10	-	1260	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80634460	80631932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ENSMUST00000036862.5	chr12	+	2997	23	FSM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGTTTCTTCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	31704867	31987629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643_31975791_31987175
ENSMUST00000036880.8	chr8	+	1642	13	FSM	ENSMUSG00000033862.8	ENSMUST00000036880.8	1642	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACAGTTTGGCAATCC	NA	NA	NA	NA	NA	NA	NA	NA	123951580	123958989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123951708_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ENSMUST00000036884.3	chr19	+	4486	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCATTACGTTCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	23118589	23145498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_23119624_23142046
ENSMUST00000036991.5	chr5	-	1816	3	FSM	ENSMUSG00000041548.5	ENSMUST00000036991.5	1816	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGCTTCATTTAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	116560923	116546549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_116547550_116553465_116553530_116560171
ENSMUST00000036996.6	chr8	+	623	3	FSM	ENSMUSG00000033938.6	ENSMUST00000036996.6	623	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCTGTGCTACTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	84293299	84298255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_84293560_84297458_84297628_84298061
ENSMUST00000037023.9	chr12	-	390	3	FSM	ENSMUSG00000034892.9	ENSMUST00000037023.9	390	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1976	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGTGTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	69205960	69204495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_69204596_69205434_69205535_69205770
ENSMUST00000037096.9	chr2	+	2277	13	FSM	ENSMUSG00000038085.14	ENSMUST00000037096.9	2277	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTTCTCTGTTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	156154218	156217555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_156154720_156161929_156161984_156170237_156170376_156175498_156175553_156177169_156177334_156180494_156180652_156181050_156181203_156183521_156183661_156195114_156195230_156207038_156207217_156209476_156209598_156215565_156215730_156217215
ENSMUST00000037115.9	chr15	+	1007	4	FSM	ENSMUSG00000038622.9	ENSMUST00000037115.9	1007	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCAGTTTTACTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	52575837	52593960	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_52576083_52582741_52582901_52584419_52584525_52593462
ENSMUST00000037127.15	chr4	+	1719	9	FSM	ENSMUSG00000033423.17	ENSMUST00000037127.15	1719	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCTTGTGTCTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	117407561	117531494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ENSMUST00000037205.11	chr7	+	828	3	FSM	ENSMUSG00000033429.11	ENSMUST00000037205.11	828	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTTATTTGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	64042392	64061873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_64042592_64049916_64050255_64061582
ENSMUST00000037246.7	chr19	-	1067	8	FSM	ENSMUSG00000034108.7	ENSMUST00000037246.7	1067	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	4889360	4875393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884200_4884339_4888858_4888932_4889224
ENSMUST00000037285.10	chr11	+	3512	20	FSM	ENSMUSG00000011877.14	ENSMUST00000037285.10	3512	20	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGAGGTGGGGCTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	77384387	77398612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393654_77393682_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ENSMUST00000037324.12	chr11	+	1440	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGTTTCTTAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	52122835	52137685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ENSMUST00000037333.17	chr17	+	1999	7	FSM	ENSMUSG00000034165.17	ENSMUST00000037333.17	1999	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTTGTGATCCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	47816052	47910616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_47816192_47889633_47889699_47904578_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUST00000037349.8	chrX	-	2237	16	FSM	ENSMUSG00000036932.15	ENSMUST00000037349.8	2237	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	47602440	47563820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ENSMUST00000037376.14	chr6	+	1405	10	FSM	ENSMUSG00000034744.14	ENSMUST00000037376.14	1405	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	83771963	83779538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUST00000037399.16	chr7	+	1028	5	FSM	ENSMUSG00000040466.17	ENSMUST00000037399.16	1028	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATTGATTGATTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	27147402	27165569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_27147622_27158680_27158846_27158987_27159078_27161991_27162121_27165144
ENSMUST00000037539.15	chr16	+	2142	8	FSM	ENSMUSG00000039903.19	ENSMUST00000037539.15	2142	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTAAGTTCACTCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	90627746	90701773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_90628321_90663142_90663340_90666453_90666578_90672926_90673080_90687417_90687562_90691465_90691544_90694251_90694342_90700991
ENSMUST00000037807.3	chr6	+	1242	3	FSM	ENSMUSG00000034777.3	ENSMUST00000037807.3	1242	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTGTCCCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	83688245	83715295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_83688526_83710080_83710269_83714521
ENSMUST00000037843.7	chr16	-	1851	3	FSM	ENSMUSG00000039568.7	ENSMUST00000037843.7	1851	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTAGTCTTGCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	4698179	4692641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_4693734_4694225_4694286_4697480
ENSMUST00000037967.6	chrX	-	2023	3	FSM	ENSMUSG00000032806.14	ENSMUST00000037967.6	2023	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCTCGGGTCCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	73416955	73412822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_73414618_73416219_73416289_73416796
ENSMUST00000038027.6	chr7	-	2884	18	FSM	ENSMUSG00000036427.6	ENSMUST00000038027.6	2884	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTAGGGTTTTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	33929761	33900754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ENSMUST00000038096.8	chr11	+	2520	6	FSM	ENSMUSG00000039253.8	ENSMUST00000038096.8	2520	6	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTAAGACTGGTATATTT	NA	NA	NA	NA	NA	NA	NA	NA	121312226	121322114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_121312430_121315751_121315904_121316380_121316473_121317446_121317530_121319870_121319994_121320247
ENSMUST00000038108.12	chr3	-	1249	4	FSM	ENSMUSG00000037152.12	ENSMUST00000038108.12	1249	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGGGTGGAACCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	51316409	51312097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51316284
ENSMUST00000038169.8	chr10	-	544	3	FSM	ENSMUSG00000033307.8	ENSMUST00000038169.8	544	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTGCCTCAGCTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	75696074	75695186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_75695378_75695520_75695694_75695894
ENSMUST00000038225.8	chr2	+	3101	12	FSM	ENSMUSG00000038963.16	ENSMUST00000038225.8	3101	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATGTCTAAGCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	180102771	180116660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_180102992_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114627_180114895_180114961_180115306_180115456_180115896
ENSMUST00000038368.9	chr2	+	934	2	FSM	ENSMUSG00000042745.10	ENSMUST00000038368.9	934	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTGTGACTTCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	152578170	152579330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_152578666_152578891
ENSMUST00000038383.14	chr6	+	1371	10	FSM	ENSMUSG00000061758.14	ENSMUST00000038383.14	1371	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTCAACTGTCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	34361152	34373885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_34361343_34364606_34364775_34365710_34365828_34366989_34367068_34368951_34369075_34369323_34369431_34369849_34369932_34370992_34371077_34371661_34371745_34373546
ENSMUST00000038406.7	chr6	+	1358	10	FSM	ENSMUSG00000029762.7	ENSMUST00000038406.7	1358	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAAGTGATTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	34331053	34345398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_34331232_34333190_34333359_34334395_34334513_34335065_34335144_34340266_34340390_34340656_34340764_34341171_34341254_34342141_34342226_34342837_34342921_34345060
ENSMUST00000038407.6	chr9	+	2440	3	FSM	ENSMUSG00000034839.6	ENSMUST00000038407.6	2440	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1666	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGGATTCTAGGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	60620271	60646084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_60620689_60631429_60631641_60644272
ENSMUST00000038434.4	chr4	-	856	2	FSM	ENSMUSG00000036114.4	ENSMUST00000038434.4	856	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCTGTTGTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	41713534	41712032	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_41712815_41713460
ENSMUST00000038521.14	chr7	+	1365	5	FSM	ENSMUSG00000035585.17	ENSMUST00000038521.14	1365	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTTTGAGTCCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	3696763	3704011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698362_3698621_3703526
ENSMUST00000038522.10	chr14	-	4501	23	FSM	ENSMUSG00000021870.18	ENSMUST00000038522.10	4501	23	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGTTTGAGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	26254895	26134329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ENSMUST00000038564.13	chr4	-	1174	5	FSM	ENSMUSG00000028207.19	ENSMUST00000038564.13	1174	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGTTTGTGTTATACAA	NA	NA	NA	NA	NA	NA	NA	NA	9669162	9621695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_9622227_9624359_9624402_9635900_9635970_9639197_9639348_9668780
ENSMUST00000038600.4	chr2	+	2080	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTCTAGAACTTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	28358077	28361190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
ENSMUST00000038614.12	chr7	+	973	5	FSM	ENSMUSG00000042675.16	ENSMUST00000038614.12	973	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGGCTCACATGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	126376126	126379686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126376276_126376942_126377126_126377225_126377270_126377477_126377587_126379198
ENSMUST00000038673.14	chr9	+	411	4	FSM	ENSMUSG00000035048.14	ENSMUST00000038673.14	411	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCACTTGGTTTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	102503861	102511441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_102503887_102506745_102506777_102506961_102507088_102511212
ENSMUST00000038868.14	chr4	+	2466	13	FSM	ENSMUSG00000034401.17	ENSMUST00000038868.14	2466	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGGTATTTTCATAGGT	NA	NA	NA	NA	NA	NA	NA	NA	111577180	111686339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
ENSMUST00000038973.7	chr17	-	1234	11	FSM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGGTTATGTATTATA	NA	NA	NA	NA	NA	NA	NA	NA	25459090	25453290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ENSMUST00000039152.14	chr11	+	4325	23	FSM	ENSMUSG00000034931.16	ENSMUST00000039152.14	4325	23	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTTTATTATGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	101623775	101658184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
ENSMUST00000039161.10	chr9	+	918	8	FSM	ENSMUSG00000035443.11	ENSMUST00000039161.10	918	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGAAGTGTTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	26911017	26918630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918096_26918248_26918453
ENSMUST00000039388.3	chr11	+	1382	2	FSM	ENSMUSG00000034936.3	ENSMUST00000039388.3	1382	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTGATCTGGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	101556366	101558658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101556464_101557373
ENSMUST00000039601.10	chr11	+	821	5	FSM	ENSMUSG00000040767.11	ENSMUST00000039601.10	821	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAGAAAGCCATAGT	NA	NA	NA	NA	NA	NA	NA	NA	32155414	32158984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_32155664_32156959_32157051_32157556_32157663_32158333_32158409_32158684
ENSMUST00000039608.9	chr18	+	2456	17	FSM	ENSMUSG00000035765.11	ENSMUST00000039608.9	2456	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	75151855	75420035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ENSMUST00000039665.8	chr15	+	2255	14	FSM	ENSMUSG00000032783.10	ENSMUST00000039665.8	2255	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATGGGGCAGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	98972858	98981284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
ENSMUST00000039763.14	chr10	-	1557	8	FSM	ENSMUSG00000040006.14	ENSMUST00000039763.14	1557	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTATTTTTAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	7656681	7643710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_7644350_7646120_7646285_7649061_7649193_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
ENSMUST00000039894.13	chr13	-	1844	17	FSM	ENSMUSG00000039233.13	ENSMUST00000039894.13	1844	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTTCTCTGCCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	14214223	14172536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860_14203992_14214122
ENSMUST00000039900.4	chr11	-	918	2	FSM	ENSMUSG00000032673.6	ENSMUST00000039900.4	918	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTGTCTTTAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	29465033	29462875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_29463677_29464916
ENSMUST00000040005.13	chr2	-	1228	10	FSM	ENSMUSG00000040174.15	ENSMUST00000040005.13	1228	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATGATTTGATCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	93841075	93810981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
ENSMUST00000040042.11	chr2	-	1150	7	FSM	ENSMUSG00000015083.12	ENSMUST00000040042.11	1150	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTGTCGTTTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	25390625	25388662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_25388836_25388916_25388956_25389025_25389128_25389409_25389518_25389600_25389672_25389850_25389988_25390105
ENSMUST00000040135.9	chr10	+	1286	8	FSM	ENSMUSG00000040034.16	ENSMUST00000040135.9	1286	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAATGTTGGCTTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	7543266	7554645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
ENSMUST00000040254.16	chr8	+	4780	29	FSM	ENSMUSG00000036270.17	ENSMUST00000040254.16	4780	29	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTTTGATGTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	106607512	106619857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ENSMUST00000040261.7	chr19	+	1228	11	FSM	ENSMUSG00000036278.8	ENSMUST00000040261.7	1228	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCACTGTCTGGGTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	7034177	7175422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896_7174979_7175066_7175102_7175277
ENSMUST00000040361.8	chr6	+	1789	4	FSM	ENSMUSG00000039347.8	ENSMUST00000040361.8	1789	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCCTCTGCTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	48514548	48518735	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_48514789_48516157_48516206_48516973_48517101_48517361
ENSMUST00000040372.14	chr19	+	606	4	FSM	ENSMUSG00000036372.15	ENSMUST00000040372.14	606	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATGTCCATTCTTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	10181377	10185188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_10181629_10183787_10183898_10184527_10184665_10185080
ENSMUST00000040423.12	chr2	+	1691	4	FSM	ENSMUSG00000032679.13	ENSMUST00000040423.12	1691	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTATCTTGACTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	103926145	103945699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_103926273_103934515_103934595_103941084_103941190_103944319
ENSMUST00000040428.4	chr11	-	611	3	FSM	ENSMUSG00000093989.2	ENSMUST00000040428.4	611	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1465	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTGTCTGTGCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	70130668	70128949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70129297_70129763_70129841_70130481
ENSMUST00000040519.12	chr12	+	1065	5	FSM	ENSMUSG00000037787.15	ENSMUST00000040519.12	1065	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTGCAAGTTGAGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	111679694	111700654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111700100
ENSMUST00000040560.11	chr10	-	1206	6	FSM	ENSMUSG00000040521.12	ENSMUST00000040560.11	1206	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGTGTGAGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	126866709	126858200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126866612
ENSMUST00000040577.5	chr11	+	1510	4	FSM	ENSMUSG00000038046.5	ENSMUST00000040577.5	1510	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATATGAGTGTTTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	76134540	76141445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_76134913_76135104_76135350_76138172_76138341_76140720
ENSMUST00000040607.6	chr6	+	743	4	FSM	ENSMUSG00000034192.6	ENSMUST00000040607.6	743	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTAATGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	91492909	91499607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_91493061_91494029_91494141_91496530_91496627_91499222
ENSMUST00000040656.8	chr13	+	1253	7	FSM	ENSMUSG00000038286.12	ENSMUST00000040656.8	1253	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTCCTGTTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	34221579	34258057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_34221753_34228406_34228511_34230768_34230936_34234263_34234418_34244416_34244549_34247892_34248017_34257658
ENSMUST00000040721.9	chr5	+	2050	6	FSM	ENSMUSG00000034118.16	ENSMUST00000040721.9	2050	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAATGGTCCCGTTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	130108210	130164570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_130108503_130130430_130131377_130143308_130143508_130158348_130158400_130163299_130163340_130164048
ENSMUST00000040735.12	chr17	-	1496	11	FSM	ENSMUSG00000036820.13	ENSMUST00000040735.12	1496	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	24382740	24374806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555
ENSMUST00000040824.2	chr3	+	404	2	FSM	ENSMUSG00000042737.10	ENSMUST00000040824.2	404	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTGTAGTTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	89173858	89174384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89173914_89174035
ENSMUST00000040872.13	chr2	+	3458	20	FSM	ENSMUSG00000027412.13	ENSMUST00000040872.13	3458	20	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGAGAACCACGGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	160730027	160747922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_160730138_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743577_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ENSMUST00000041008.10	chr12	+	2613	12	FSM	ENSMUSG00000033373.17	ENSMUST00000041008.10	2613	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	76884187	76968186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_76884426_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ENSMUST00000041042.13	chr11	+	1957	9	FSM	ENSMUSG00000034412.14	ENSMUST00000041042.13	1957	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTGTATAGTTAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	4136788	4165505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
ENSMUST00000041053.11	chr18	+	1516	10	FSM	ENSMUSG00000036880.11	ENSMUST00000041053.11	1516	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	74912267	74939279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
ENSMUST00000041097.13	chr7	+	2081	9	FSM	ENSMUSG00000041769.14	ENSMUST00000041097.13	2081	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	138448087	138484786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ENSMUST00000041122.11	chr4	+	672	5	FSM	ENSMUSG00000042198.13	ENSMUST00000041122.11	672	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGGGGTTTTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	3938913	3943528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_3939132_3939378_3939527_3941245_3941312_3942720_3942820_3943387
ENSMUST00000041190.17	chr15	-	1916	15	FSM	ENSMUSG00000037570.17	ENSMUST00000041190.17	1916	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTTTATTTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	99149842	99140697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
ENSMUST00000041240.4	chr1	-	1763	5	FSM	ENSMUSG00000041889.8	ENSMUST00000041240.4	1763	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGAGTCCGTCCTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	135302975	135298794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_135299735_135299934_135300103_135300889_135301024_135302115_135302288_135302626
ENSMUST00000041262.14	chr12	+	676	4	FSM	ENSMUSG00000090258.8	ENSMUST00000041262.14	676	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTATGTTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	76812311	76829954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_76812413_76820031_76820168_76822367_76822439_76829586
ENSMUST00000041266.11	chr5	-	1375	8	FSM	ENSMUSG00000038552.15	ENSMUST00000041266.11	1375	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGACTGGTTCCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	31453215	31450229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_31450509_31450757_31450831_31451029_31451158_31451447_31451538_31451973_31452179_31452349_31452466_31452556_31452702_31452876
ENSMUST00000041318.14	chr8	+	3101	17	FSM	ENSMUSG00000036564.18	ENSMUST00000041318.14	3101	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTCGTGTTTCCTATC	NA	NA	NA	NA	NA	NA	NA	NA	96404712	96441584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_96405012_96423821_96423917_96426740_96426786_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96438952_96438992_96439805
ENSMUST00000041331.4	chr19	-	4832	6	FSM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	44396148	44382893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
ENSMUST00000041366.14	chr5	+	646	4	FSM	ENSMUSG00000039771.14	ENSMUST00000041366.14	646	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCAGTGTGTGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	136145484	136151801	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_136145660_136148848_136148939_136150942_136151118_136151595
ENSMUST00000041459.9	chr9	-	1786	3	FSM	ENSMUSG00000037190.13	ENSMUST00000041459.9	1786	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTATGCCTTCAGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	107419064	107416205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_107417585_107418201_107418240_107418695
ENSMUST00000041466.14	chr5	+	2492	4	FSM	ENSMUSG00000034173.14	ENSMUST00000041466.14	2492	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGTCTCAAAAAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	129924563	129932464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_129924694_129928023_129928274_129929185_129929337_129930503
ENSMUST00000041477.15	chr9	-	2223	2	FSM	ENSMUSG00000037206.16	ENSMUST00000041477.15	2223	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTCTGATGCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	58066504	58063550	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_58065514_58066244
ENSMUST00000041500.8	chr2	+	2812	2	FSM	ENSMUSG00000032802.9	ENSMUST00000041500.8	2812	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAACAGTTTTGGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	151947443	151953296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_151947868_151950908
ENSMUST00000041593.15	chr2	-	2036	15	FSM	ENSMUSG00000040272.15	ENSMUST00000041593.15	2036	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTCTTCATTCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	93680144	93665782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93670367_93670469_93671653_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678532_93679889
ENSMUST00000041640.5	chr12	+	2456	10	FSM	ENSMUSG00000036188.5	ENSMUST00000041640.5	2456	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGTTTCATAATTCGT	NA	NA	NA	NA	NA	NA	NA	NA	36207112	36247290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_36207423_36215868_36215934_36220447_36220587_36226578_36226678_36232346_36232508_36236724_36236940_36237648_36237785_36243668_36243798_36244982_36245113_36246218
ENSMUST00000041686.10	chr19	-	1000	6	FSM	ENSMUSG00000037349.10	ENSMUST00000041686.10	1000	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTTAGCTTCTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	6973405	6970385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6972138_6972609_6973104_6973375
ENSMUST00000041859.9	chr13	-	1713	11	FSM	ENSMUSG00000038372.15	ENSMUST00000041859.9	1713	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTTGCTGTGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	32522723	32003561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_32003962_32004124_32004194_32101602_32101700_32124466_32124586_32284339_32284468_32310982_32311088_32311889_32312083_32409117_32409228_32411197_32411286_32418335_32418381_32522364
ENSMUST00000041944.9	chr11	+	2459	3	FSM	ENSMUSG00000042529.15	ENSMUST00000041944.9	2459	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATCTGGCTTGCTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	60956629	60961953	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_60956804_60957491_60957777_60959953
ENSMUST00000041984.14	chr10	-	2092	8	FSM	ENSMUSG00000039166.17	ENSMUST00000041984.14	2092	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTCTTACAGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	25175062	25046019	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_25047147_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25174937
ENSMUST00000042054.3	chr13	+	2363	2	FSM	ENSMUSG00000038402.3	ENSMUST00000042054.3	2363	2	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGTTGTTCTAGGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	31809798	31815386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_31811240_31814464
ENSMUST00000042055.10	chr2	+	2586	10	FSM	ENSMUSG00000039515.12	ENSMUST00000042055.10	2586	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	30306050	30337817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
ENSMUST00000042191.12	chr5	+	832	4	FSM	ENSMUSG00000034211.15	ENSMUST00000042191.12	832	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGCAGCTTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	129792566	129795544	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_129792614_129792747_129792828_129793790_129793931_129794979
ENSMUST00000042235.15	chr9	-	1794	8	FSM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	52550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGTCAATGCTGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	78389006	78385730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388920
ENSMUST00000042334.16	chr17	+	830	6	FSM	ENSMUSG00000037805.16	ENSMUST00000042334.16	830	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGCCTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	28547444	28550007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
ENSMUST00000042392.14	chr19	+	1357	9	FSM	ENSMUSG00000037847.15	ENSMUST00000042392.14	1357	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATACTGTGTGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	18609313	18629291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_18609364_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18622503_18628599
ENSMUST00000042405.8	chr7	+	1197	9	FSM	ENSMUSG00000046865.8	ENSMUST00000042405.8	1197	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	27869134	27878694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_27869244_27873928_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
ENSMUST00000042468.9	chr9	-	2082	4	FSM	ENSMUSG00000037971.11	ENSMUST00000042468.9	2082	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAATAAAAATAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	50679752	50674127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_50675317_50675523_50675591_50675995_50676227_50679157
ENSMUST00000042477.13	chr11	+	1106	6	FSM	ENSMUSG00000078656.12	ENSMUST00000042477.13	1106	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTGTTACTACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	101144532	101150375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149735
ENSMUST00000042493.10	chr1	-	1705	5	FSM	ENSMUSG00000042111.10	ENSMUST00000042493.10	1705	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCTCTCATTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	34478753	34475750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_34476692_34476807_34476940_34477930_34478014_34478123_34478228_34478308
ENSMUST00000042497.14	chr19	-	1661	10	FSM	ENSMUSG00000037916.15	ENSMUST00000042497.14	1661	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAACTTTGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	4062806	4057496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ENSMUST00000042587.12	chr3	+	2271	3	FSM	ENSMUSG00000028023.17	ENSMUST00000042587.12	2271	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTCTGGATTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	129007620	129013237	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_129008431_129009287_129009494_129011982
ENSMUST00000042700.12	chr19	-	797	7	FSM	ENSMUSG00000038155.12	ENSMUST00000042700.12	797	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTCTTTGGTGCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	4092263	4090284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092164
ENSMUST00000042790.5	chr9	-	773	2	FSM	ENSMUSG00000038086.5	ENSMUST00000042790.5	773	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTGCTGCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	50663593	50662377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_50663034_50663476
ENSMUST00000042844.7	chr4	-	1793	4	FSM	ENSMUSG00000041120.7	ENSMUST00000042844.7	1793	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3911	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTGGACTGGCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	138820304	138809594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_138810914_138812551_138812664_138812764_138812960_138820137
ENSMUST00000043045.10	chrX	+	1609	11	FSM	ENSMUSG00000039382.13	ENSMUST00000043045.10	1609	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGGGCGTGCTTTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	7588455	7594445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ENSMUST00000043286.15	chr18	-	2591	10	FSM	ENSMUSG00000038425.19	ENSMUST00000043286.15	2591	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGGCTCTCACTGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	70663505	70641754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70663258
ENSMUST00000043378.9	chr5	-	1559	12	FSM	ENSMUSG00000039886.9	ENSMUST00000043378.9	1559	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGGACTGTGGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	135773302	135764338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
ENSMUST00000043429.12	chr4	-	1932	10	FSM	ENSMUSG00000032897.18	ENSMUST00000043429.12	1932	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	NA	NA	NA	NA	NA	NA	NA	120682903	120614634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
ENSMUST00000043459.13	chr12	-	1706	3	FSM	ENSMUSG00000037904.15	ENSMUST00000043459.13	1706	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGATCTGCCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	110945455	110942860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_110944205_110944381_110944562_110945273
ENSMUST00000043675.9	chr9	-	544	3	FSM	ENSMUSG00000038717.10	ENSMUST00000043675.9	544	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGTTGTCTTTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	44832040	44824514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_44824765_44825948_44826110_44831907
ENSMUST00000043680.9	chr11	+	1802	11	FSM	ENSMUSG00000035198.10	ENSMUST00000043680.9	1802	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCCCCGGTCTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	101010763	101017245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
ENSMUST00000043693.7	chrX	+	2472	10	FSM	ENSMUSG00000037315.16	ENSMUST00000043693.7	2472	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAACGCCTAAGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	20326765	20384135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ENSMUST00000043707.7	chr5	+	4207	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGCTCAGTGAATAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	135661471	135675230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
ENSMUST00000043722.10	chr11	-	2330	6	FSM	ENSMUSG00000033880.12	ENSMUST00000043722.10	2330	6	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGTTTGTTCATCCATAC	NA	NA	NA	NA	NA	NA	NA	NA	118292918	118283576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_118284949_118287416_118287670_118288946_118289079_118289205_118289398_118290553_118290628_118292611
ENSMUST00000043760.15	chr5	+	1660	11	FSM	ENSMUSG00000041939.15	ENSMUST00000043760.15	1660	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGGCCCTGTGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	114582366	114598652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
ENSMUST00000043836.8	chr2	+	3552	4	FSM	ENSMUSG00000068205.15	ENSMUST00000043836.8	3552	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTGTATTATTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	140237354	140264874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_140237642_140242781_140242899_140260736_140260835_140261824
ENSMUST00000043870.9	chr7	-	1650	2	FSM	ENSMUSG00000038489.9	ENSMUST00000043870.9	1650	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	141055045	141051772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_141053318_141054940
ENSMUST00000043898.8	chr7	-	708	4	FSM	ENSMUSG00000036835.8	ENSMUST00000043898.8	708	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGTTCTTGGGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	30262666	30261289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30261560_30261748_30261854_30262220_30262364_30262476
ENSMUST00000043907.14	chr17	+	918	3	FSM	ENSMUSG00000038880.14	ENSMUST00000043907.14	918	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	NA	NA	NA	NA	NA	NA	NA	25114089	25115263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25114463_25114635_25114679_25114761
ENSMUST00000043911.8	chr9	+	1683	8	FSM	ENSMUSG00000038884.15	ENSMUST00000043911.8	1683	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTAATAGCCTTAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	20779937	20785603	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
ENSMUST00000043931.9	chr11	-	625	6	FSM	ENSMUSG00000034566.11	ENSMUST00000043931.9	625	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	115310788	115306514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310717
ENSMUST00000043937.9	chr3	-	1067	4	FSM	ENSMUSG00000041084.9	ENSMUST00000043937.9	1067	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2442	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACTTTTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	130503093	130489560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_130490128_130496964_130497163_130499598_130499693_130502885
ENSMUST00000044002.10	chr5	-	2039	9	FSM	ENSMUSG00000036687.14	ENSMUST00000044002.10	2039	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTGGGCTTTCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	139800038	139790706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_139791497_139791936_139792132_139792659_139792830_139793374_139793467_139793548_139793625_139793711_139793803_139794111_139794278_139798719_139798948_139799807
ENSMUST00000044007.3	chr11	-	813	2	FSM	ENSMUSG00000039670.3	ENSMUST00000044007.3	813	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCAGGGGCTTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	120348894	120347431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120347989_120348638
ENSMUST00000044200.11	chr6	+	2597	16	FSM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	125108871	125121716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ENSMUST00000044252.7	chr17	-	1427	7	FSM	ENSMUSG00000039183.7	ENSMUST00000044252.7	1427	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAAGGTGTCTGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	25105322	25101585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
ENSMUST00000044277.10	chr2	+	1616	5	FSM	ENSMUSG00000038467.16	ENSMUST00000044277.10	1616	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTGTGTGTTCAGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	154498937	154536705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_154499292_154531437_154531616_154533129_154533245_154534468_154534596_154535863
ENSMUST00000044567.4	chr3	+	1471	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTGTCCTCTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	54642959	54657216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
ENSMUST00000044579.12	chr5	-	1323	8	FSM	ENSMUSG00000033467.13	ENSMUST00000044579.12	1323	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGCGGCCAGCCATCAT	NA	NA	NA	NA	NA	NA	NA	NA	109706859	109702578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383_109705481_109706670
ENSMUST00000044675.5	chr2	+	1373	8	FSM	ENSMUSG00000098789.8	ENSMUST00000044675.5	1373	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	119857963	119863075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594
ENSMUST00000044746.5	chr5	-	1376	2	FSM	ENSMUSG00000040429.7	ENSMUST00000044746.5	1376	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTTTGTATGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	3943933	3940580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_3941898_3943874
ENSMUST00000044776.13	chr10	+	2573	18	FSM	ENSMUSG00000044005.14	ENSMUST00000044776.13	2573	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATTTTTATTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	128030325	128045808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_128030777_128035050_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ENSMUST00000044858.16	chr17	+	2627	10	FSM	ENSMUSG00000039656.18	ENSMUST00000044858.16	2627	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATTTTCTGGACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	34250785	34257371	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
ENSMUST00000044901.14	chr9	-	1983	13	FSM	ENSMUSG00000039607.18	ENSMUST00000044901.14	1983	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAATGGTTCCTCCGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	117081551	116407582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_116407771_116415085_116415164_116465436_116465548_116507714_116507766_116510198_116510296_116524887_116524935_116548383_116548491_116634480_116634561_116651806_116651965_116788535_116788628_116885804_116885864_116939028_116939187_117080794
ENSMUST00000044923.15	chr12	-	2850	9	FSM	ENSMUSG00000041645.15	ENSMUST00000044923.15	2850	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGAGGGTGTTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	103392078	103374240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ENSMUST00000045110.14	chr1	+	6282	13	FSM	ENSMUSG00000042046.16	ENSMUST00000045110.14	6282	13	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGTTGCCTGTTTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	132345292	132394696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
ENSMUST00000045138.6	chr1	-	2538	5	FSM	ENSMUSG00000040124.6	ENSMUST00000045138.6	2538	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGTCTGTCATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	163231238	163212476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_163214267_163219978_163220120_163222159_163222262_163224380_163224739_163231091
ENSMUST00000045329.10	chr5	-	2346	5	FSM	ENSMUSG00000037339.18	ENSMUST00000045329.10	2346	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTCTGCCTAGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	33786966	33757699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786196
ENSMUST00000045356.9	chr15	+	835	4	FSM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTCATAGTCCGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	5146126	5148622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_5146167_5146768_5146905_5147100_5147186_5148048
ENSMUST00000045366.10	chr8	-	2748	7	FSM	ENSMUSG00000038506.14	ENSMUST00000045366.10	2748	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCCTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	13337841	13305963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_13307977_13308946_13309044_13311384_13311468_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ENSMUST00000045467.14	chr17	-	965	9	FSM	ENSMUSG00000073422.12	ENSMUST00000045467.14	965	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	34247030	34245006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246975
ENSMUST00000045602.9	chr17	-	732	4	FSM	ENSMUSG00000040048.15	ENSMUST00000045602.9	732	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTCTGGTGACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	24943452	24941033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24941195_24941354_24941495_24941628_24941768_24943160
ENSMUST00000045604.4	chr2	-	776	2	FSM	ENSMUSG00000036850.5	ENSMUST00000045604.4	776	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTTTTGAATCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	24865110	24864128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_24864694_24864899
ENSMUST00000045674.4	chr19	+	2859	1	FSM	ENSMUSG00000040105.4	ENSMUST00000045674.4	2859	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAATTTCTGCTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	28941352	28944211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_28941400_28944200
ENSMUST00000045748.7	chrX	-	2115	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACCTTGGTTTGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	92875807	92808212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
ENSMUST00000045855.9	chr6	-	1058	4	FSM	ENSMUSG00000042770.9	ENSMUST00000045855.9	1058	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGACAGTTTTAAATTATT	NA	NA	NA	NA	NA	NA	NA	NA	135145213	135114519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_135115062_135129818_135130000_135132148_135132288_135145017
ENSMUST00000045931.12	chr12	+	2597	12	FSM	ENSMUSG00000042472.12	ENSMUST00000045931.12	2597	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTGGCTCTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	84363625	84390497	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ENSMUST00000045956.14	chr17	+	2748	19	FSM	ENSMUSG00000040312.15	ENSMUST00000045956.14	2748	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTGCGATTTCCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	35828072	35841912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35828127_35828687_35828837_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ENSMUST00000045993.15	chr5	+	1755	10	FSM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGTTCTATTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	100666174	100695669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
ENSMUST00000046114.5	chr10	-	604	3	FSM	ENSMUSG00000034932.5	ENSMUST00000046114.5	604	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCATGCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	81102768	81100546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_81100832_81101484_81101642_81102606
ENSMUST00000046207.9	chr12	+	1180	4	FSM	ENSMUSG00000037361.9	ENSMUST00000046207.9	1180	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTTTCTCTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	4867543	4877659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_4867820_4870593_4870713_4876757_4876897_4877013
ENSMUST00000046340.9	chr12	+	790	8	FSM	ENSMUSG00000042523.13	ENSMUST00000046340.9	790	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTGTCTATTTTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	84161144	84185231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_84161174_84167928_84168096_84171248_84171359_84173735_84173792_84178105_84178162_84182340_84182468_84183270_84183412_84185127
ENSMUST00000046549.5	chr17	-	1420	3	FSM	ENSMUSG00000040694.5	ENSMUST00000046549.5	1420	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGCCTGTTCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	48739958	48726258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_48726662_48729968_48730534_48739506
ENSMUST00000046558.8	chr4	+	608	6	FSM	ENSMUSG00000063172.14	ENSMUST00000046558.8	608	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTCTGATTCCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	107111121	107137125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_107111193_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
ENSMUST00000046587.8	chr9	-	3225	7	FSM	ENSMUSG00000040722.8	ENSMUST00000046587.8	3225	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	57375341	57348609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375215
ENSMUST00000046638.10	chr10	-	2033	12	FSM	ENSMUSG00000036009.17	ENSMUST00000046638.10	2033	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCAATGTTCTTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	105677239	105599049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661858_105662453_105665708_105665816_105668711_105668877_105676936
ENSMUST00000046644.7	chr13	+	559	4	FSM	ENSMUSG00000042043.7	ENSMUST00000046644.7	559	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAATTTTCAGTTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	94925417	94979430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_94925511_94968867_94968974_94973615_94973703_94979157
ENSMUST00000046651.7	chr17	+	1135	6	FSM	ENSMUSG00000040771.15	ENSMUST00000046651.7	1135	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGAACGTCTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	48717107	48724294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_48717266_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
ENSMUST00000046770.10	chr1	-	742	4	FSM	ENSMUSG00000037499.10	ENSMUST00000046770.10	742	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1883	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGTGTATGGTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	191050391	191038985	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_191039287_191042115_191042220_191043656_191043718_191050115
ENSMUST00000046831.11	chr9	-	785	4	FSM	ENSMUSG00000040883.19	ENSMUST00000046831.11	785	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCATGGTCATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21838758	21832304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838587
ENSMUST00000046839.10	chr17	-	1776	3	FSM	ENSMUSG00000040888.11	ENSMUST00000046839.10	1776	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCTGGTTTCTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	24915130	24912163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24913417_24914227_24914425_24914804
ENSMUST00000046916.9	chr8	-	2593	9	FSM	ENSMUSG00000037725.9	ENSMUST00000046916.9	2593	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAAACAAATGAGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	22675835	22658175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
ENSMUST00000046974.5	chr13	+	1798	10	FSM	ENSMUSG00000037816.11	ENSMUST00000046974.5	1798	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAGACACATTCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	50571899	50587805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_50572024_50573875_50573914_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586206_50586383_50586463_50586592_50587333
ENSMUST00000047040.4	chr7	-	1662	2	FSM	ENSMUSG00000037060.4	ENSMUST00000047040.4	1662	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTTTAGATCTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	105131507	105129289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_105130427_105130982
ENSMUST00000047196.14	chr5	+	2808	6	FSM	ENSMUSG00000040557.15	ENSMUST00000047196.14	2808	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTTTTACATTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	134961221	134971491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_134961265_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ENSMUST00000047218.5	chr14	+	1565	8	FSM	ENSMUSG00000033589.5	ENSMUST00000047218.5	1565	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTCTTCACATCTC	NA	NA	NA	NA	NA	NA	NA	NA	70782793	70786373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_70783179_70783916_70783990_70784369_70784447_70784554_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
ENSMUST00000047281.10	chr8	+	902	3	FSM	ENSMUSG00000041203.10	ENSMUST00000047281.10	902	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	85753451	85756915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85753864_85756167_85756246_85756503
ENSMUST00000047368.8	chr3	-	875	8	FSM	ENSMUSG00000033752.8	ENSMUST00000047368.8	875	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	84063093	83995239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_83995482_84000861_84000907_84012241_84012357_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84062968
ENSMUST00000047393.7	chr7	+	1352	3	FSM	ENSMUSG00000042340.7	ENSMUST00000047393.7	1352	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTCCATGTGGGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	127311907	127317364	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_127311952_127313096_127313216_127316175
ENSMUST00000047419.8	chr15	+	837	4	FSM	ENSMUSG00000041736.8	ENSMUST00000047419.8	837	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTCTGTACTTAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	83447792	83458404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_83447846_83455585_83455797_83456400_83456540_83457970
ENSMUST00000047429.9	chr16	+	846	3	FSM	ENSMUSG00000039680.11	ENSMUST00000047429.9	846	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2916	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACGGCTGTATTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	91855157	91909115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_91855369_91896481_91896622_91908620
ENSMUST00000047436.11	chr17	-	1504	13	FSM	ENSMUSG00000041319.15	ENSMUST00000047436.11	1504	13	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	23892816	23887591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487
ENSMUST00000047531.16	chr6	+	1562	4	FSM	ENSMUSG00000039958.18	ENSMUST00000047531.16	1562	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAACTCAAGTGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	149043010	149052669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_149043203_149045531_149045941_149048655_149048787_149051839
ENSMUST00000047611.4	chr17	+	1079	6	FSM	ENSMUSG00000041429.4	ENSMUST00000047611.4	1079	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGGCCCGTTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	24851655	24857811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_24851829_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
ENSMUST00000047632.14	chr2	-	2971	5	FSM	ENSMUSG00000036160.14	ENSMUST00000047632.14	2971	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTTTTTATTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	26792891	26780446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26782738_26782878_26783080_26789348_26789438_26789740_26789945_26792705
ENSMUST00000047749.7	chr8	-	1587	4	FSM	ENSMUSG00000036934.10	ENSMUST00000047749.7	1587	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1048	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCATACCAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	86159462	86135387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_86136520_86138741_86138925_86153488_86153586_86159287
ENSMUST00000047768.11	chr8	-	2253	10	FSM	ENSMUSG00000039396.12	ENSMUST00000047768.11	2253	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTTGTAAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	54092100	54039901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_54040363_54041959_54042135_54052133_54052555_54053985_54054156_54058667_54058835_54060362_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
ENSMUST00000047885.14	chr10	-	2743	12	FSM	ENSMUSG00000039480.15	ENSMUST00000047885.14	2743	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGTATTATTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	34294548	34179604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ENSMUST00000047954.15	chr18	+	1596	12	FSM	ENSMUSG00000024302.17	ENSMUST00000047954.15	1596	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTCTGAGTGGGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	23548566	23737288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_23548683_23608172_23608300_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23737021
ENSMUST00000047997.8	chr11	+	3546	2	FSM	ENSMUSG00000038560.8	ENSMUST00000047997.8	3546	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACACTCTCGCTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	96904219	96915560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_96904437_96912231
ENSMUST00000048197.10	chr19	-	1344	5	FSM	ENSMUSG00000041845.12	ENSMUST00000048197.10	1344	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACATTCAAAGAGCTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	4489460	4475486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4476285_4476654_4476790_4482082_4482193_4482795_4482884_4489247
ENSMUST00000048208.10	chr14	+	1721	6	FSM	ENSMUSG00000034795.15	ENSMUST00000048208.10	1721	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTCCACATTGAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	77274211	77349644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_77274412_77305299_77305394_77306276_77306390_77329107_77329507_77330209_77330327_77348846
ENSMUST00000048209.16	chr7	+	1588	8	FSM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	38911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	46495262	46505051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ENSMUST00000048249.8	chr17	+	528	4	FSM	ENSMUSG00000041881.14	ENSMUST00000048249.8	528	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTTTCTTAGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	34043545	34057291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_34043655_34044574_34044625_34048640_34048791_34057072
ENSMUST00000048393.8	chr15	+	1270	3	FSM	ENSMUSG00000037204.8	ENSMUST00000048393.8	1270	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTTGGCCTGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	101182152	101188826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_101182427_101184813_101185132_101188148
ENSMUST00000048493.12	chr2	-	4744	25	FSM	ENSMUSG00000034032.16	ENSMUST00000048493.12	4744	25	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGACTGTTTTGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	119618018	119594440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ENSMUST00000048502.10	chr7	+	2275	19	FSM	ENSMUSG00000040811.16	ENSMUST00000048502.10	2275	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTGGAGTCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	18915128	18940404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_18915149_18915633_18915663_18916194_18916366_18918714_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ENSMUST00000048568.6	chr9	-	1025	2	FSM	ENSMUSG00000042106.6	ENSMUST00000048568.6	1025	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGTCCCATACTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	107863078	107861421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_107862264_107862895
ENSMUST00000048685.13	chr9	-	1256	7	FSM	ENSMUSG00000042210.18	ENSMUST00000048685.13	1256	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTTGTGTTTCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	106324877	106317249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322851_106322969_106323029_106324729
ENSMUST00000048698.14	chr5	-	2304	15	FSM	ENSMUSG00000036980.14	ENSMUST00000048698.14	2304	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	NA	NA	NA	NA	NA	NA	NA	NA	138185488	138176878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ENSMUST00000048702.7	chr13	-	2990	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTGAGGTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	93328791	93282790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ENSMUST00000048731.6	chr7	-	2277	6	FSM	ENSMUSG00000039043.6	ENSMUST00000048731.6	2277	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGACTGAGGCTTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	79585107	79575108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_79576599_79577373_79577538_79577919_79578127_79579320_79579454_79581550_79581627_79584900
ENSMUST00000048892.14	chr4	+	4919	5	FSM	ENSMUSG00000039662.17	ENSMUST00000048892.14	4919	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTCCTGTATCAG	NA	NA	NA	NA	NA	NA	NA	NA	152381683	152391578	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_152382026_152383141_152383231_152384127_152384298_152384993_152385212_152387478
ENSMUST00000048994.7	chr17	-	1447	4	FSM	ENSMUSG00000042419.9	ENSMUST00000048994.7	1447	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGAGTCTCCTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	35454768	35439150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_35439953_35440112_35440335_35453927_35454208_35454625
ENSMUST00000049166.5	chr6	-	1516	4	FSM	ENSMUSG00000032757.7	ENSMUST00000049166.5	1516	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTGTTCTTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	4086972	4076898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_4078037_4079960_4080018_4082457_4082583_4086776
ENSMUST00000049294.4	chr7	+	1420	3	FSM	ENSMUSG00000040824.4	ENSMUST00000049294.4	1420	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTCTCTCTTTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	18883646	18887467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_18883820_18885142_18885323_18886400
ENSMUST00000049461.7	chr8	-	1902	15	FSM	ENSMUSG00000056228.11	ENSMUST00000049461.7	1902	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGGAAGATTAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	11600783	11563976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294_11580428_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
ENSMUST00000049519.4	chr11	-	2259	3	FSM	ENSMUSG00000046879.8	ENSMUST00000049519.4	2259	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGTATTATCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	48762201	48756071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_48757831_48759388_48759608_48761920
ENSMUST00000049530.14	chr15	-	2092	3	FSM	ENSMUSG00000047878.14	ENSMUST00000049530.14	2092	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGCCTCATGGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	83135975	83110922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_83112796_83114714_83114859_83135900
ENSMUST00000049567.10	chr9	-	3172	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCTCTGAATTAACC	NA	NA	NA	NA	NA	NA	NA	NA	21150367	21141026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
ENSMUST00000049628.16	chr5	-	371	4	FSM	ENSMUSG00000050856.17	ENSMUST00000049628.16	371	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTCTCTTTACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	108582314	108581109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_108581204_108581596_108581696_108581891_108581947_108582191
ENSMUST00000049648.9	chr9	+	2231	3	FSM	ENSMUSG00000025893.9	ENSMUST00000049648.9	2231	3	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGAAGGGAAAATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	4309832	4331732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_4309935_4316826_4317072_4329848
ENSMUST00000049699.9	chr8	+	3255	3	FSM	ENSMUSG00000048310.9	ENSMUST00000049699.9	3255	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAAGGCTGCCATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106627072	106658410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_106627173_106639251_106640279_106656282
ENSMUST00000049822.10	chr3	+	1781	6	FSM	ENSMUSG00000028145.10	ENSMUST00000049822.10	1781	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTTCTTGTTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	94217395	94239847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_94217596_94224696_94224884_94230888_94231049_94231583_94231692_94237068_94237194_94238846
ENSMUST00000049861.11	chr5	-	3335	5	FSM	ENSMUSG00000061898.11	ENSMUST00000049861.11	3335	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTTTATGTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	143166485	143157940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_143160814_143161790_143161887_143162219_143162347_143165240_143165298_143166303
ENSMUST00000049966.6	chr6	+	921	5	FSM	ENSMUSG00000030058.18	ENSMUST00000049966.6	921	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTCTTACCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	87864909	87867741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171
ENSMUST00000050214.9	chr17	-	2102	14	FSM	ENSMUSG00000002625.11	ENSMUST00000050214.9	2102	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	32569581	32540397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ENSMUST00000050273.9	chr16	+	444	3	FSM	ENSMUSG00000046516.11	ENSMUST00000050273.9	444	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTTGTGTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38167352	38173125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_38167570_38169602_38169692_38172987
ENSMUST00000050323.6	chr2	+	1606	8	FSM	ENSMUSG00000002104.12	ENSMUST00000050323.6	1606	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	90865985	90876074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_90866334_90866891_90867231_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
ENSMUST00000050331.13	chrX	+	1701	4	FSM	ENSMUSG00000045427.14	ENSMUST00000050331.13	1701	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGTCAGCTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	133502019	133507133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_133502083_133503448_133503512_133503666_133503712_133505603
ENSMUST00000050373.7	chr8	+	1335	1	FSM	ENSMUSG00000047654.7	ENSMUST00000050373.7	1335	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGTTAGCGGTGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	70354833	70356168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_70354800_70356200
ENSMUST00000050410.11	chr2	-	775	5	FSM	ENSMUSG00000044627.12	ENSMUST00000050410.11	775	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	32178087	32168827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32177897
ENSMUST00000050516.14	chr10	+	1450	11	FSM	ENSMUSG00000044475.15	ENSMUST00000050516.14	1450	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	59838660	59935808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_59838730_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
ENSMUST00000050813.4	chr10	-	1567	3	FSM	ENSMUSG00000049038.4	ENSMUST00000050813.4	1567	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTATTCCAAAACATCAT	NA	NA	NA	NA	NA	NA	NA	NA	84963891	84955296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_84956679_84962231_84962351_84963825
ENSMUST00000050827.14	chr5	-	2344	12	FSM	ENSMUSG00000029422.16	ENSMUST00000050827.14	2344	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGTATGCTATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	123887452	123866488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ENSMUST00000050970.4	chr5	+	1196	2	FSM	ENSMUSG00000029642.12	ENSMUST00000050970.4	1196	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGAGTGGTTTCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	147013859	147015896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_147014504_147015344
ENSMUST00000051053.5	chr11	+	1012	3	FSM	ENSMUSG00000044949.5	ENSMUST00000051053.5	1012	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTACAATTTCTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	32405369	32466687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_32405547_32449224_32449462_32466089
ENSMUST00000051094.9	chr8	-	1792	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTCTTGTCTTAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	23747090	23731361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
ENSMUST00000051176.9	chr6	-	1606	3	FSM	ENSMUSG00000047420.9	ENSMUST00000051176.9	1606	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCCAGGTTCCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	35303076	35289602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_35290805_35292227_35292329_35302773
ENSMUST00000051364.4	chr7	-	763	2	FSM	ENSMUSG00000044709.7	ENSMUST00000051364.4	763	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTGCTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	19307268	19298873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_19299602_19307233
ENSMUST00000051490.15	chr13	+	764	5	FSM	ENSMUSG00000050002.15	ENSMUST00000051490.15	764	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCGGGCTGTACTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	58305462	58311760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_58305551_58307690_58307722_58307965_58308053_58310651_58310696_58311246
ENSMUST00000051711.16	chr19	-	2867	19	FSM	ENSMUSG00000024969.16	ENSMUST00000051711.16	2867	19	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	7318953	7254123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532_7318663_7318824
ENSMUST00000051867.7	chr8	-	2107	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACAGTTGCCACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	79547769	79533079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
ENSMUST00000051912.13	chr7	+	2181	8	FSM	ENSMUSG00000030498.16	ENSMUST00000051912.13	2181	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACACATTATTTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	51528714	51644201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_51528990_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ENSMUST00000052183.7	chr4	+	2345	4	FSM	ENSMUSG00000050213.7	ENSMUST00000052183.7	2345	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGAGGGTATTACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	124960464	124967835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_124960746_124961882_124961986_124964899_124965484_124966458
ENSMUST00000052325.7	chr16	-	923	6	FSM	ENSMUSG00000005732.15	ENSMUST00000052325.7	923	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTGAAAACCTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	18065931	18057665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18065890
ENSMUST00000052380.5	chr19	-	708	2	FSM	ENSMUSG00000050957.5	ENSMUST00000052380.5	708	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGCTTATATGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	29302756	29298743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_29299140_29302444
ENSMUST00000052431.12	chrX	-	2024	4	FSM	ENSMUSG00000050394.15	ENSMUST00000052431.12	2024	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGGGCACTGGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	133652166	133649211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_133650975_133651299_133651380_133651689_133651783_133652078
ENSMUST00000052440.8	chr17	-	685	1	FSM	ENSMUSG00000043801.8	ENSMUST00000052440.8	685	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3001	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCAGCCCTGCCCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	17566402	17565717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_17565700_17566400
ENSMUST00000052472.6	chr12	+	3570	24	FSM	ENSMUSG00000047454.13	ENSMUST00000052472.6	3570	24	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTGCGGCCTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	78273152	78731546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78551390_78551526_78569671_78569729_78579430_78579473_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
ENSMUST00000052505.10	chr16	-	3391	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGGGTTTTTTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	8455576	8451092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_8454257_8455349
ENSMUST00000052509.6	chr7	+	1484	3	FSM	ENSMUSG00000054716.5	ENSMUST00000052509.6	1484	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACGATGCCTGTAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	126843445	126853975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126843781_126844156_126844307_126852976
ENSMUST00000052645.13	chr3	-	1155	5	FSM	ENSMUSG00000050174.16	ENSMUST00000052645.13	1155	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTTTTTCTCTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	37473745	37459058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_37459644_37463656_37463712_37466508_37466565_37470849_37471054_37473490
ENSMUST00000052648.9	chr10	-	2255	5	FSM	ENSMUSG00000059554.13	ENSMUST00000052648.9	2255	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGGAAAGAGCCAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	18110726	18092531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ENSMUST00000052715.10	chr4	-	2341	2	FSM	ENSMUSG00000045268.14	ENSMUST00000052715.10	2341	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTACTTATTTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	119031053	119026709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_119028240_119030242
ENSMUST00000052865.16	chr9	+	2907	5	FSM	ENSMUSG00000050912.16	ENSMUST00000052865.16	2907	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTAGTGTTTTGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	7764041	7794334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_7764314_7768290_7768342_7790842_7791110_7791311_7791466_7792171
ENSMUST00000053116.7	chr5	-	1684	2	FSM	ENSMUSG00000051022.8	ENSMUST00000053116.7	1684	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTTGCTCCTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	39801977	39771281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_39772748_39801759
ENSMUST00000053150.8	chr9	-	374	1	FSM	ENSMUSG00000050621.8	ENSMUST00000053150.8	374	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTATCCCTTGGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	114811807	114811433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_114811400_114811800
ENSMUST00000053202.12	chr4	+	1217	8	FSM	ENSMUSG00000043333.13	ENSMUST00000053202.12	1217	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACCAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	123681667	123723697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_123681765_123703706_123703970_123708035_123708185_123711656_123711770_123716549_123716651_123718653_123718715_123720630_123720693_123723326
ENSMUST00000053251.12	chr8	-	2466	8	FSM	ENSMUSG00000031586.18	ENSMUST00000053251.12	2466	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGTCTGACAACTT	NA	NA	NA	NA	NA	NA	NA	NA	34419891	34272670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_34274215_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ENSMUST00000053521.15	chr7	-	3150	5	FSM	ENSMUSG00000062040.15	ENSMUST00000053521.15	3150	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCTTCTCTTCTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	29605529	29593140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603485_29605478
ENSMUST00000053540.11	chrX	+	930	3	FSM	ENSMUSG00000046432.13	ENSMUST00000053540.11	930	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGAAATTCAACAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	135171009	135172727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_135171151_135171558_135171632_135172011
ENSMUST00000053558.10	chr8	-	927	5	FSM	ENSMUSG00000050914.17	ENSMUST00000053558.10	927	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGCATTCTTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	46452904	46449938	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452653
ENSMUST00000053593.8	chrX	-	3545	3	FSM	ENSMUSG00000050029.8	ENSMUST00000053593.8	3545	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACCAGTTATCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	50106895	50092788	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_50095628_50103847_50104161_50106502
ENSMUST00000053594.7	chr10	-	1661	3	FSM	ENSMUSG00000045867.11	ENSMUST00000053594.7	1661	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTGCGTGTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	95159970	95010607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_95011841_95158447_95158752_95159846
ENSMUST00000053664.9	chr2	-	1977	8	FSM	ENSMUSG00000050043.17	ENSMUST00000053664.9	1977	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCTTGCTGTTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	84508400	84501660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ENSMUST00000053729.14	chr2	+	1642	11	FSM	ENSMUSG00000026784.15	ENSMUST00000053729.14	1642	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGTCTTTGTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	22785533	22830278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
ENSMUST00000053744.9	chr12	+	2344	1	FSM	ENSMUSG00000046791.9	ENSMUST00000053744.9	2344	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTTTCTAAGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	83997381	83999725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_83997400_83999700
ENSMUST00000053918.9	chr15	-	1339	6	FSM	ENSMUSG00000022571.10	ENSMUST00000053918.9	1339	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGGACTTTAGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	75793409	75788325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_75788929_75789085_75789179_75790100_75790314_75790521_75790702_75791077_75791143_75793224
ENSMUST00000053981.6	chrX	+	1094	3	FSM	ENSMUSG00000045237.6	ENSMUST00000053981.6	1094	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTCTAGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	69429482	69433023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_69429758_69431499_69431773_69432477
ENSMUST00000054052.15	chr8	+	3390	10	FSM	ENSMUSG00000049577.16	ENSMUST00000054052.15	3390	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGGAGGCCCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	123008879	123063990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123009262_123032096_123032220_123034230_123034381_123050438_123050573_123058828_123058929_123060459_123060667_123061190_123061422_123061670_123061767_123061851_123061999_123062170
ENSMUST00000054220.10	chr8	-	1260	5	FSM	ENSMUSG00000045128.10	ENSMUST00000054220.10	1260	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGGCATCTGGTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	71350056	71347365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71350002
ENSMUST00000054289.13	chr17	+	1094	5	FSM	ENSMUSG00000044533.16	ENSMUST00000054289.13	1094	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTTTTTGTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	24939083	24940903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
ENSMUST00000054356.16	chr3	+	2778	17	FSM	ENSMUSG00000045934.16	ENSMUST00000054356.16	2778	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTATTTTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	96069320	96079034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_96069576_96069945_96070037_96070408_96070531_96070784_96070846_96070984_96071128_96071564_96071644_96071749_96071886_96072102_96072191_96072313_96072403_96072487_96072613_96075127_96075195_96075388_96075460_96075914_96076082_96076351_96076526_96077122_96077306_96077668_96077963_96078401
ENSMUST00000054442.11	chr16	+	1884	6	FSM	ENSMUSG00000044442.12	ENSMUST00000054442.11	1884	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGCCTTTGTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	87151072	87165630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87163026_87163169_87164352
ENSMUST00000054544.7	chr12	-	526	2	FSM	ENSMUSG00000049751.7	ENSMUST00000054544.7	526	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCAAGCCTTGTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	69230857	69229514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_69229940_69230756
ENSMUST00000054835.15	chr13	+	2111	12	FSM	ENSMUSG00000021694.19	ENSMUST00000054835.15	2111	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1361	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTTTCCTTTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	108295271	108331519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
ENSMUST00000054946.10	chr17	+	997	5	FSM	ENSMUSG00000045744.12	ENSMUST00000054946.10	997	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGGTAATTTCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	24692857	24694443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_24693213_24693378_24693535_24693612_24693715_24693963_24694118_24694213
ENSMUST00000054956.15	chr19	+	2024	11	FSM	ENSMUSG00000024776.19	ENSMUST00000054956.15	2024	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCGGTTGTCACATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	34169628	34217733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_34170032_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
ENSMUST00000055018.11	chr4	-	3512	4	FSM	ENSMUSG00000038668.15	ENSMUST00000055018.11	3512	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58553357	58435254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553133
ENSMUST00000055022.15	chr6	+	1820	12	FSM	ENSMUSG00000002871.15	ENSMUST00000055022.15	1820	12	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGTGAGCTGATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	88879232	88889213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_88879513_88882930_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887384_88887529_88887633_88887778_88887860_88888664
ENSMUST00000055190.8	chr5	-	3247	14	FSM	ENSMUSG00000038859.8	ENSMUST00000055190.8	3247	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCTGTAAGTGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	144294922	144201335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_144202843_144203417_144203456_144212582_144212776_144214454_144214527_144215337_144215549_144217629_144217778_144218799_144218968_144221253_144221407_144222267_144222406_144222884_144222957_144223059_144223122_144255738_144255826_144261366_144261443_144294600
ENSMUST00000055424.13	chr11	-	606	5	FSM	ENSMUSG00000025144.18	ENSMUST00000055424.13	606	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	120604564	120601767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120604518
ENSMUST00000055447.14	chr18	-	2597	15	FSM	ENSMUSG00000049411.16	ENSMUST00000055447.14	2597	15	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTATGTTTATAAGC	NA	NA	NA	NA	NA	NA	NA	NA	12254571	12114994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_12116700_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12246451_12246530_12251460_12251508_12254437
ENSMUST00000055575.8	chr4	+	943	2	FSM	ENSMUSG00000050188.9	ENSMUST00000055575.8	943	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGTGCCTGATGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	125990415	125992377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_125990603_125991621
ENSMUST00000055858.14	chr7	+	1982	6	FSM	ENSMUSG00000045411.17	ENSMUST00000055858.14	1982	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	NA	NA	NA	NA	NA	NA	NA	43896145	43901743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_43896248_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000056089.8	chr1	-	1311	2	FSM	ENSMUSG00000050777.8	ENSMUST00000056089.8	1311	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCCTATGACTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	120001804	119995106	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_119996055_120001441
ENSMUST00000056149.15	chr2	-	1999	13	FSM	ENSMUSG00000032046.16	ENSMUST00000056149.15	1999	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGAATCAGAGTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	150746661	150674412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
ENSMUST00000056288.7	chr7	+	1932	2	FSM	ENSMUSG00000045165.7	ENSMUST00000056288.7	1932	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTGTATGACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	126690530	126693158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126690645_126691340
ENSMUST00000056370.13	chr3	-	1007	5	FSM	ENSMUSG00000028066.16	ENSMUST00000056370.13	1007	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCTGTGAGGAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	88317638	88301449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_88301878_88303211_88303408_88306441_88306543_88307017_88307124_88317462
ENSMUST00000056391.15	chr19	+	2975	9	FSM	ENSMUSG00000024947.18	ENSMUST00000056391.15	2975	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	6385068	6390919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ENSMUST00000056403.7	chr6	-	1217	1	FSM	ENSMUSG00000044927.7	ENSMUST00000056403.7	1217	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTCGTTGTCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	87958619	87957402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_87957400_87958600
ENSMUST00000056458.14	chr4	-	757	10	FSM	ENSMUSG00000060288.14	ENSMUST00000056458.14	757	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	NA	NA	NA	NA	NA	NA	NA	NA	119177681	119157206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_119157400_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
ENSMUST00000056512.14	chr13	+	3063	13	FSM	ENSMUSG00000042015.18	ENSMUST00000056512.14	3063	13	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGGGTTTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95112855	95159822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133696_95136373_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
ENSMUST00000056965.12	chr4	-	1163	6	FSM	ENSMUSG00000055401.15	ENSMUST00000056965.12	1163	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	148236516	148230244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236398
ENSMUST00000057151.10	chr12	+	2971	5	FSM	ENSMUSG00000043061.11	ENSMUST00000057151.10	2971	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACAGTGTGCTTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	30634424	30641214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_30634562_30635468_30635590_30637198_30637254_30638472_30638567_30638650
ENSMUST00000057177.7	chr15	+	601	4	FSM	ENSMUSG00000045996.13	ENSMUST00000057177.7	601	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTCTATTCAATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	36174178	36177156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_36174360_36175132_36175203_36175529_36175623_36176899
ENSMUST00000057257.10	chr12	+	1292	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCCCGAAAAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	72132630	72147635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUST00000057416.8	chr12	+	3367	2	FSM	ENSMUSG00000046675.8	ENSMUST00000057416.8	3367	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCGTGCCATTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	102710020	102713820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_102710426_102710858
ENSMUST00000057454.4	chr2	+	645	3	FSM	ENSMUSG00000046814.4	ENSMUST00000057454.4	645	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTGTGCAGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	118998253	119002871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_118998355_119000156_119000252_119002422
ENSMUST00000057576.8	chr7	-	2902	17	FSM	ENSMUSG00000034951.11	ENSMUST00000057576.8	2902	17	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGGTGTTTCCTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	121580934	121522061	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_121522692_121524646_121524791_121528409_121528525_121529752_121529837_121534880_121535022_121536176_121536364_121540392_121540459_121543000_121543118_121548967_121549123_121550385_121550514_121555152_121555352_121562360_121562484_121563423_121563507_121570502_121570672_121576489_121576607_121576838_121576988_121580639
ENSMUST00000057649.8	chr10	+	563	1	FSM	ENSMUSG00000045886.8	ENSMUST00000057649.8	563	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	701	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGTGGTCATGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	43400079	43400642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_43400100_43400600
ENSMUST00000057795.12	chr5	-	2270	11	FSM	ENSMUSG00000029422.16	ENSMUST00000057795.12	2270	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCCATTGTATGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	123887475	123866492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123887351
ENSMUST00000057836.12	chr11	-	2862	4	FSM	ENSMUSG00000049755.15	ENSMUST00000057836.12	2862	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGTGGTTTCAATAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	58214149	58205949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_58208361_58210149_58210417_58213425_58213556_58214095
ENSMUST00000057843.12	chr11	-	1459	4	FSM	ENSMUSG00000051355.19	ENSMUST00000057843.12	1459	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTGGGTAAAAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	22928996	22849763	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_22850058_22906410_22906693_22923899_22924103_22928316
ENSMUST00000057885.13	chr5	-	738	8	FSM	ENSMUSG00000047215.15	ENSMUST00000057885.13	738	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65548787	65545706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ENSMUST00000057907.10	chr4	-	1829	6	FSM	ENSMUSG00000029001.16	ENSMUST00000057907.10	1829	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCCCTGCGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	148244540	148237259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_148238102_148240602_148240739_148240851_148240948_148241036_148241164_148242993_148243281_148244199
ENSMUST00000057921.10	chr11	+	2242	5	FSM	ENSMUSG00000062421.14	ENSMUST00000057921.10	2242	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1017	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCATGTTCTCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	103857564	103876163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_103857654_103859904_103860072_103863778_103863890_103872519_103872645_103874413
ENSMUST00000057934.10	chr8	+	2738	18	FSM	ENSMUSG00000001472.18	ENSMUST00000057934.10	2738	18	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAAATTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	124100562	124128631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
ENSMUST00000058030.10	chr4	+	2797	8	FSM	ENSMUSG00000062937.8	ENSMUST00000058030.10	2797	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATCAGATTATACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	89055358	89099318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
ENSMUST00000058089.13	chr2	+	1747	9	FSM	ENSMUSG00000027593.16	ENSMUST00000058089.13	1747	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGCTTGTTTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	154633076	154709181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ENSMUST00000058240.14	chr14	-	1986	7	FSM	ENSMUSG00000044551.14	ENSMUST00000058240.14	1986	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGACTGTTAAATGACC	NA	NA	NA	NA	NA	NA	NA	NA	70396951	70391853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_70392726_70393298_70393406_70393609_70393726_70393864_70393968_70394107_70394249_70394627_70395104_70396780
ENSMUST00000058245.5	chr6	+	918	5	FSM	ENSMUSG00000040242.15	ENSMUST00000058245.5	918	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGTGTGCTTTTCATGGC	NA	NA	NA	NA	NA	NA	NA	NA	146479418	146494363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131
ENSMUST00000058333.10	chr7	+	694	4	FSM	ENSMUSG00000089847.9	ENSMUST00000058333.10	694	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTGCTTTCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	105289654	105291050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_105289830_105289968_105290065_105290234_105290436_105290828
ENSMUST00000058370.14	chr11	+	2778	6	FSM	ENSMUSG00000049957.15	ENSMUST00000058370.14	2778	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGAGAACATTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	120348940	120355184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120349105_120349437_120349572_120350867_120351091_120352541_120352625_120352831_120352912_120353090
ENSMUST00000058393.9	chr4	+	1098	4	FSM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTTCACAAAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	154041693	154046382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_154041780_154044205_154044320_154044987_154045450_154045946
ENSMUST00000058437.14	chr1	-	1163	7	FSM	ENSMUSG00000043716.14	ENSMUST00000058437.14	1163	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	16174886	16171518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ENSMUST00000058534.7	chr8	-	2997	3	FSM	ENSMUSG00000045248.7	ENSMUST00000058534.7	2997	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTTTTGGAATCATT	NA	NA	NA	NA	NA	NA	NA	NA	73302114	73248404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_73250951_73251366_73251442_73301738
ENSMUST00000058639.11	chr12	-	1109	6	FSM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGAAGCAGCATGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	69629884	69624401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
ENSMUST00000058659.9	chr15	-	1144	2	FSM	ENSMUSG00000044986.11	ENSMUST00000058659.9	1144	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTGCCTCCTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	78290107	78283755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_78284231_78289438
ENSMUST00000058714.10	chr10	+	1816	2	FSM	ENSMUSG00000047139.10	ENSMUST00000058714.10	1816	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGTCTGTTGAATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	43455164	43460261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_43455319_43458599
ENSMUST00000058868.9	chr9	+	2223	7	FSM	ENSMUSG00000036411.11	ENSMUST00000058868.9	2223	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGTTCAGTTCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	22322808	22355977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_22323046_22335408_22336104_22341651_22341796_22342971_22343105_22346390_22346697_22351162_22351261_22355367
ENSMUST00000058880.9	chr7	-	710	5	FSM	ENSMUSG00000006335.17	ENST00000391757.1	708	5	1	-3	1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTATGTACACTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	3632085	3623333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_3623474_3623775_3623946_3624061_3624132_3627597_3627669_3631826
ENSMUST00000058906.7	chr10	+	939	4	FSM	ENSMUSG00000049422.8	ENSMUST00000058906.7	939	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTTTACTTTAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	75771406	75773559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_75771839_75772071_75772280_75773140_75773289_75773408
ENSMUST00000059080.7	chr2	+	394	6	FSM	ENSMUSG00000039001.13	ENSMUST00000059080.7	394	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTTGCTGTTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	179899169	179900238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
ENSMUST00000059112.12	chr15	-	1049	4	FSM	ENSMUSG00000048175.14	ENSMUST00000059112.12	1049	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGCTGTGTGGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	98043540	98033594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98034320_98039164_98039270_98040531_98040692_98043481
ENSMUST00000059229.16	chr5	-	2044	6	FSM	ENSMUSG00000029500.17	ENSMUST00000059229.16	2044	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATTTGTTTTAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	110417753	110407020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_110408304_110413377_110413509_110413605_110413695_110413776_110413903_110414952_110415132_110417517
ENSMUST00000059297.6	chrX	+	2364	4	FSM	ENSMUSG00000045427.14	ENSMUST00000059297.6	2364	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATCTTGCATAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	133502034	133507803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_133502083_133503440_133503512_133503666_133503712_133505603
ENSMUST00000059305.17	chr7	-	1932	10	FSM	ENSMUSG00000102252.6	ENSMUST00000059305.17	1932	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTCTCAGAAGTCAATG	NA	NA	NA	NA	NA	NA	NA	NA	59654859	59632242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
ENSMUST00000059319.8	chr11	+	1568	4	FSM	ENSMUSG00000049904.8	ENSMUST00000059319.8	1568	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTATCTGTGTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	22462087	22469234	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_22462584_22467187_22467292_22467407_22467522_22468380
ENSMUST00000059566.11	chr2	+	1867	10	FSM	ENSMUSG00000027257.14	ENSMUST00000059566.11	1867	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGTCTTTTGATAGCC	NA	NA	NA	NA	NA	NA	NA	NA	91086506	91095024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_91086689_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
ENSMUST00000059642.17	chr7	-	1540	7	FSM	ENSMUSG00000030591.18	ENSMUST00000059642.17	1540	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGTGTATCCAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	28880126	28873612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
ENSMUST00000059666.6	chr14	-	2315	2	FSM	ENSMUSG00000045107.6	ENSMUST00000059666.6	2315	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTCCTTCAGTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	20133251	20125703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_20127713_20132945
ENSMUST00000059743.12	chr1	+	1154	11	FSM	ENSMUSG00000034343.15	ENSMUST00000059743.12	1154	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTGGCAATAAGAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	91178032	91213462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_91178160_91181481_91181550_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUST00000059802.7	chr9	+	710	4	FSM	ENSMUSG00000048758.15	ENSMUST00000059802.7	710	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGTCTGTTGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	106306737	106308766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_106306839_106307168_106307214_106307506_106307572_106308267
ENSMUST00000059975.8	chr1	+	2112	3	FSM	ENSMUSG00000051185.10	ENSMUST00000059975.8	2112	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGCGTTCTAGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	95241347	95263009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_95241976_95252833_95252969_95261660
ENSMUST00000060232.8	chr4	+	2133	8	FSM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTAATGGCTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	8535643	8607778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
ENSMUST00000060435.8	chr4	-	3445	12	FSM	ENSMUSG00000050989.11	ENSMUST00000060435.8	3445	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGCTTTTCCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	134279477	134265202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_134267101_134267944_134268047_134268133_134268247_134269647_134269754_134270023_134270213_134270360_134270443_134271895_134272034_134272499_134272625_134272791_134273002_134275261_134275396_134278727_134278846_134279247
ENSMUST00000060444.6	chr11	+	2061	2	FSM	ENSMUSG00000043602.6	ENSMUST00000060444.6	2061	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTCTGGCCTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	70655034	70663754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70655376_70662034
ENSMUST00000060447.13	chr2	-	968	7	FSM	ENSMUSG00000051730.16	ENSMUST00000060447.13	968	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCATTTTCTCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	69715959	69701541	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_69701661_69702075_69702126_69704227_69704280_69709445_69709529_69711110_69711293_69711640_69711756_69715592
ENSMUST00000060608.13	chr1	+	2223	13	FSM	ENSMUSG00000049439.14	ENSMUST00000060608.13	2223	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGATTGTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	60382481	60427219	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_60382617_60391279_60391330_60392067_60392235_60393672_60393816_60402348_60402517_60405807_60405887_60410379_60410496_60411748_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
ENSMUST00000060652.5	chr15	+	3000	5	FSM	ENSMUSG00000022338.9	ENSMUST00000060652.5	3000	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTCTCATTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	44291506	44301652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ENSMUST00000060710.9	chr18	-	1945	15	FSM	ENSMUSG00000044201.11	ENSMUST00000060710.9	1945	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGATGTCTCTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	34884586	34866045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ENSMUST00000060783.7	chr7	-	2356	2	FSM	ENSMUSG00000047371.8	ENSMUST00000060783.7	2356	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTCGTCCTTAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	126944595	126941966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126944048_126944320
ENSMUST00000060987.15	chr10	+	1071	6	FSM	ENSMUSG00000035242.16	ENSMUST00000060987.15	1071	6	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	15555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	80662489	80665124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80662740_80664070_80664126_80664129_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUST00000060991.6	chr10	-	1556	6	FSM	ENSMUSG00000006736.10	ENSMUST00000060991.6	1556	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTTGTTTTCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	126906133	126903148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905983
ENSMUST00000061118.11	chr6	+	1922	10	FSM	ENSMUSG00000045100.12	ENSMUST00000061118.11	1922	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCCTCTCAGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	94477311	94581653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94553314_94553360_94569392_94569463_94575360_94575426_94576159_94576234_94580532
ENSMUST00000061135.8	chr4	+	1589	3	FSM	ENSMUSG00000039693.12	ENSMUST00000061135.8	1589	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	48539934	48561918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_48539998_48552379_48552831_48560843
ENSMUST00000061158.5	chr2	+	935	8	FSM	ENSMUSG00000051154.12	ENSMUST00000061158.5	935	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTTGGAGTTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	18677233	18681042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_18677415_18678705_18678818_18678935_18679000_18679091_18679127_18679466_18679528_18679619_18679677_18679760_18679821_18680677
ENSMUST00000061179.12	chr2	+	4967	26	FSM	ENSMUSG00000035437.16	ENSMUST00000061179.12	4967	26	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGCTTCATACAAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	37333296	37456449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ENSMUST00000061322.10	chr3	+	1113	8	FSM	ENSMUSG00000048416.16	ENSMUST00000061322.10	1113	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTTAAATTGGTCAACC	NA	NA	NA	NA	NA	NA	NA	NA	67281480	67307336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_67281596_67291883_67292032_67298310_67298356_67300224_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
ENSMUST00000061496.17	chr19	+	3193	13	FSM	ENSMUSG00000024985.21	ENSMUST00000061496.17	3193	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCAGCTGCCGCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	55730700	55921685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55919865
ENSMUST00000061508.8	chr8	+	1999	2	FSM	ENSMUSG00000047264.9	ENSMUST00000061508.8	1999	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTTGTTACTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	3543137	3547208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_3543310_3545381
ENSMUST00000061688.11	chr17	+	1844	12	FSM	ENSMUSG00000116953.2	ENSMUST00000061688.11	1844	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGCTCTGTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	15198729	15211167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15208335_15208366_15209159_15209229_15210808
ENSMUST00000061703.10	chr17	+	644	5	FSM	ENSMUSG00000045257.11	ENSMUST00000061703.10	644	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTTTTGAATTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	80597640	80604902	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_80597767_80599753_80599808_80601898_80602006_80602941_80603079_80604682
ENSMUST00000061786.6	chr11	+	1597	6	FSM	ENSMUSG00000050270.13	ENSMUST00000061786.6	1597	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAATTACTGGGGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	66915979	66926138	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_66916098_66916734_66916765_66920791_66920853_66921887_66922012_66923006_66923067_66924934
ENSMUST00000061829.8	chr18	-	1641	2	FSM	ENSMUSG00000051439.8	ENSMUST00000061829.8	1641	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTGTTTGTTGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	36859851	36858119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_36859451_36859541
ENSMUST00000061925.5	chr15	+	1851	3	FSM	ENSMUSG00000049148.9	ENSMUST00000061925.5	1851	3	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTGAGTGTCAACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	4404985	4605035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_4405298_4546100_4546810_4604205
ENSMUST00000061973.5	chr9	-	1084	2	FSM	ENSMUSG00000049734.10	ENSMUST00000061973.5	1084	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGCCGCCTCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	108888802	108887000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_108887997_108888714
ENSMUST00000062289.11	chr1	-	2487	7	FSM	ENSMUSG00000042182.17	ENSMUST00000062289.11	2487	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTTTCTTATGGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	33946897	33891132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_33892449_33901734_33901855_33902822_33903016_33903603_33903825_33917340_33917519_33922521_33922730_33946646
ENSMUST00000062356.7	chr4	+	1605	2	FSM	ENSMUSG00000047945.7	ENSMUST00000062356.7	1605	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTGGTCTTCTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	129407373	129409778	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_129407710_129408509
ENSMUST00000062405.8	chr11	-	1611	2	FSM	ENSMUSG00000049892.8	ENSMUST00000062405.8	1611	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTTTGCTTTTAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	59855770	59854006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_59855193_59855345
ENSMUST00000062492.11	chr15	+	464	5	FSM	ENSMUSG00000001289.13	ENSMUST00000062492.11	464	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGCAATGGCCTCCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	102234582	102239845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102234696_102235252_102235285_102236956_102237032_102237146_102237253_102239707
ENSMUST00000062525.11	chr1	-	2492	7	FSM	ENSMUSG00000048234.14	ENSMUST00000062525.11	2492	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTATGTAACAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	39616486	39590376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39615907
ENSMUST00000062542.5	chrX	+	1572	2	FSM	ENSMUSG00000046180.12	ENSMUST00000062542.5	1572	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCAGCAGTGTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	57956820	57965664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_57956922_57964193
ENSMUST00000062601.14	chr3	-	624	5	FSM	ENSMUSG00000062006.13	ENSMUST00000062601.14	624	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTTATCTGTGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	130523986	130520479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523769
ENSMUST00000062802.5	chr4	+	465	3	FSM	ENSMUSG00000045854.5	ENSMUST00000062802.5	465	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTGGAATCCTCAATTG	NA	NA	NA	NA	NA	NA	NA	NA	32800252	32801383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_32800336_32800609_32800751_32801142
ENSMUST00000063204.9	chr10	-	745	5	FSM	ENSMUSG00000051736.9	ENSMUST00000063204.9	745	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGACTCTTCCATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	39009902	38994799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_38995031_38996253_38996393_38998172_38998332_39008242_39008375_39009818
ENSMUST00000063531.5	chr4	-	1106	2	FSM	ENSMUSG00000028551.15	ENSMUST00000063531.5	1106	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTTTCCTGTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	109522569	109518072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_109518824_109522214
ENSMUST00000063641.11	chr16	+	517	4	FSM	ENSMUSG00000051989.12	ENSMUST00000063641.11	517	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTCTGCATTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	92098173	92109929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_92098232_92102175_92102286_92107688_92107858_92109749
ENSMUST00000063694.10	chr7	-	6396	2	FSM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGCCTCGGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	63588663	63536098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_63541546_63587714
ENSMUST00000063782.12	chr9	-	1662	7	FSM	ENSMUSG00000050471.18	ENSMUST00000063782.12	1662	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	705	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGACAGCCTTCACCTTA	NA	NA	NA	NA	NA	NA	NA	NA	35179076	35128260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35146526_35146780_35155909_35156003_35179018
ENSMUST00000064019.15	chr11	-	2151	13	FSM	ENSMUSG00000000538.19	ENSMUST00000064019.15	2151	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGATAGTCATGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	60243731	60131395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_60132172_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60243582
ENSMUST00000064050.5	chr10	-	1096	3	FSM	ENSMUSG00000020083.14	ENSMUST00000064050.5	1096	3	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCCGGTGAATGACTG	NA	NA	NA	NA	NA	NA	NA	NA	61946792	61943990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_61944903_61945662_61945790_61946735
ENSMUST00000064141.12	chr2	+	1905	15	FSM	ENSMUSG00000041966.19	ENSMUST00000064141.12	1905	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCTTTATGACTATCC	NA	NA	NA	NA	NA	NA	NA	NA	70886124	70929486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70929358
ENSMUST00000064231.8	chr7	-	1780	6	FSM	ENSMUSG00000052396.8	ENSMUST00000064231.8	1780	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTTTTCTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	98887826	98868290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_98869167_98871459_98871660_98872199_98872375_98872707_98872913_98881664_98881844_98887681
ENSMUST00000064314.10	chr8	-	1256	7	FSM	ENSMUSG00000052456.10	ENSMUST00000064314.10	1256	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	85751910	85744559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750955_85751733
ENSMUST00000064517.9	chr14	-	748	3	FSM	ENSMUSG00000052584.11	ENSMUST00000064517.9	748	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCATGTGCGAGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	76794112	76770253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_76770687_76787421_76787495_76793870
ENSMUST00000064547.13	chr7	-	1080	6	FSM	ENSMUSG00000052605.13	ENSMUST00000064547.13	1080	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCGAACCATTATTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	4869192	4847957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_4848365_4852448_4852567_4853753_4853825_4854022_4854233_4854391_4854533_4869059
ENSMUST00000064701.8	chr13	+	2130	6	FSM	ENSMUSG00000021504.15	ENSMUST00000064701.8	2130	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACTGGCAAGGAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	55747877	55758255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
ENSMUST00000064709.13	chr17	+	2812	9	FSM	ENSMUSG00000052712.18	ENSMUST00000064709.13	2812	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTACCTTCTTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	29487761	29521864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUST00000064759.7	chr3	-	3215	21	FSM	ENSMUSG00000014601.14	ENSMUST00000064759.7	3215	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	107539010	107519847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ENSMUST00000064786.12	chr11	-	2765	3	FSM	ENSMUSG00000049755.15	ENSMUST00000064786.12	2765	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATAGTGTCACTTCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	58214172	58205939	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_58208361_58210149_58210417_58214095
ENSMUST00000064798.16	chr17	+	493	3	FSM	ENSMUSG00000024038.18	ENSMUST00000064798.16	493	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTGGTTATTTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	31739088	31750305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_31739236_31740542_31740667_31750083
ENSMUST00000064889.13	chr17	-	1988	13	FSM	ENSMUSG00000023942.16	ENSMUST00000064889.13	1988	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	45906496	45896128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
ENSMUST00000065049.15	chr8	-	1006	8	FSM	ENSMUSG00000052926.17	ENSMUST00000065049.15	1006	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	85692670	85684295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85684483_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ENSMUST00000065080.10	chr9	-	4337	14	FSM	ENSMUSG00000032120.12	ENSMUST00000065080.10	4337	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTGATGTATATCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	44231582	44220533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_44222565_44224802_44225089_44225174_44225309_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
ENSMUST00000065135.12	chr8	+	1497	4	FSM	ENSMUSG00000031851.15	ENSMUST00000065135.12	1497	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCATGTCTAATTAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	126460976	126465918	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126464793
ENSMUST00000065163.15	chr7	-	1047	7	FSM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGTAGCAGCAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	79882561	79876894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091_79882127_79882257
ENSMUST00000065211.9	chr11	-	3699	9	FSM	ENSMUSG00000001323.18	ENSMUST00000065211.9	3699	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACACGATGGTAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	74816624	74797184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74810262_74810489_74816444
ENSMUST00000065329.13	chr5	+	3607	7	FSM	ENSMUSG00000053094.16	ENSMUST00000065329.13	3607	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTATCCCCGGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	130248584	130272606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_130248761_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ENSMUST00000065358.9	chr9	-	858	8	FSM	ENSMUSG00000032299.11	ENSMUST00000065358.9	858	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGGGTCTTGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	57065615	57062322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065555
ENSMUST00000065422.12	chr5	+	2268	13	FSM	ENSMUSG00000033773.15	ENSMUST00000065422.12	2268	13	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTTTCAGAAGCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	107745600	107809704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
ENSMUST00000065494.8	chr13	+	1556	3	FSM	ENSMUSG00000048368.10	ENSMUST00000065494.8	1556	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCTTTGTATATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	49736241	49746085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_49736290_49742937_49743892_49745531
ENSMUST00000065515.14	chr16	-	1945	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	56537813	56510694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ENSMUST00000065793.12	chr3	-	1893	12	FSM	ENSMUSG00000053398.12	ENSMUST00000065793.12	1893	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTCTGTGTGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	98247306	98220485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
ENSMUST00000065906.9	chr6	+	2929	15	FSM	ENSMUSG00000053460.9	ENSMUST00000065906.9	2929	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACCTGGCTTATTAATAG	NA	NA	NA	NA	NA	NA	NA	NA	72391290	72407695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_72391433_72391654_72391826_72394837_72394997_72395283_72395450_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72404880_72405033_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
ENSMUST00000066027.14	chr16	+	1050	5	FSM	ENSMUSG00000003531.16	ENSMUST00000066027.14	1050	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGGATCCTTTCCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	17884306	17889222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887945_17888096_17888741
ENSMUST00000066160.3	chr5	+	2276	15	FSM	ENSMUSG00000029521.8	ENSMUST00000066160.3	2276	15	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTGTTGTGGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	110987865	111022011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
ENSMUST00000066237.10	chr11	-	1922	15	FSM	ENSMUSG00000020182.17	ENSMUST00000066237.10	1922	15	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTGAGTAAGCGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	11848044	11764100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774848_11774869_11779101_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11848007
ENSMUST00000066352.6	chr2	+	952	5	FSM	ENSMUSG00000053746.9	ENSMUST00000066352.6	952	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAAGCTTCCTGTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	32665797	32667609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32665908_32666315_32666536_32666718_32666819_32666994_32667041_32667133
ENSMUST00000066401.7	chr7	-	1922	9	FSM	ENSMUSG00000007891.17	ENSMUST00000066401.7	1922	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTATTGGTGTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	141941594	141929653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931087_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ENSMUST00000066431.14	chr11	-	1603	18	FSM	ENSMUSG00000057897.15	ENSMUST00000066431.14	1603	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGATGATGACAACGACAA	NA	NA	NA	NA	NA	NA	NA	NA	6015545	5921671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUST00000066469.14	chr8	+	1300	10	FSM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	70755167	70765640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ENSMUST00000066587.12	chr11	-	3987	14	FSM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGTTACGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	116089871	116062713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
ENSMUST00000066668.14	chr1	-	2488	15	FSM	ENSMUSG00000026209.16	ENSMUST00000066668.14	2488	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGTTTGAAATGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	75294281	75284539	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
ENSMUST00000066701.13	chr12	+	889	6	FSM	ENSMUSG00000064215.14	ENSMUST00000066701.13	889	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCATTGTTCCCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	103400470	103406498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_103400610_103401680_103401833_103402821_103402942_103403934_103403965_103405659_103405822_103406212
ENSMUST00000066760.8	chr11	-	2219	11	FSM	ENSMUSG00000005204.13	ENSMUST00000066760.8	2219	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATGCAAGTGGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	69572910	69563946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572814
ENSMUST00000066888.10	chr11	-	2613	14	FSM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGCTTTGATCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	93776592	93750068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ENSMUST00000067033.8	chr15	-	2471	9	FSM	ENSMUSG00000022329.16	ENSMUST00000067033.8	2471	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAGTATTAGAAAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	35155896	34875818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35155672
ENSMUST00000067272.9	chr12	-	590	3	FSM	ENSMUSG00000054302.16	ENSMUST00000067272.9	590	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGAAAAGGAGTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	54742682	54720255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_54720576_54739658_54739742_54742495
ENSMUST00000067354.10	chr6	+	1339	2	FSM	ENSMUSG00000048489.13	ENSMUST00000067354.10	1339	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCAATTTTGTTACTG	NA	NA	NA	NA	NA	NA	NA	NA	116627569	116629755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_116627807_116628653
ENSMUST00000067563.9	chr15	+	1383	6	FSM	ENSMUSG00000022359.11	ENSMUST00000067563.9	1383	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTTTTGAAGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	58004772	58022050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58015992_58016142_58016975_58017101_58021297
ENSMUST00000067567.5	chr4	-	1626	10	FSM	ENSMUSG00000028670.15	ENSMUST00000067567.5	1626	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCCCTTATGTGGTACA	NA	NA	NA	NA	NA	NA	NA	NA	135699937	135695534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_135696379_135696454_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
ENSMUST00000067752.5	chr15	+	1946	2	FSM	ENSMUSG00000054619.8	ENSMUST00000067752.5	1946	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTGCATTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	100202641	100212236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_100203226_100210874
ENSMUST00000067763.10	chrX	-	1032	8	FSM	ENSMUSG00000054626.12	ENSMUST00000067763.10	1032	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1085	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAGTGGCAAATAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	52799663	52785714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798236_52799598
ENSMUST00000067821.13	chr13	+	2743	14	FSM	ENSMUSG00000021470.20	ENSMUST00000067821.13	2743	14	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAACTCTCCACTATGT	NA	NA	NA	NA	NA	NA	NA	NA	63963116	64017469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839
ENSMUST00000067853.6	chr5	-	2242	2	FSM	ENSMUSG00000054675.6	ENSMUST00000067853.6	2242	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTCTGGATTATCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	113938577	113931789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_113933815_113938360
ENSMUST00000067902.13	chr4	-	990	3	FSM	ENSMUSG00000043257.16	ENSMUST00000067902.13	990	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCTGTCTTCTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	133399958	133389564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_133390103_133397048_133397172_133399629
ENSMUST00000067925.8	chr8	+	2628	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGTTCTGTTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	57964940	57969033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
ENSMUST00000068056.12	chr17	+	1739	11	FSM	ENSMUSG00000019432.16	ENSMUST00000068056.12	1739	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTGTTCATGGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	35460721	35472683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ENSMUST00000068116.13	chr1	+	2050	13	FSM	ENSMUSG00000026305.16	ENSMUST00000068116.13	2050	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGTGTGGGTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	90926500	91056662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_90926616_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
ENSMUST00000068167.13	chr1	+	2849	23	FSM	ENSMUSG00000026305.16	ENSMUST00000068167.13	2849	23	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTTTTGTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	90981165	91056666	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_90981446_90996284_90996386_90996415_90996420_91004665_91004714_91006112_91006158_91006752_91006804_91012667_91012728_91016355_91016434_91019323_91019390_91021281_91021360_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91036301_91036395_91038076_91038170_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
ENSMUST00000068261.9	chr17	+	1528	3	FSM	ENSMUSG00000024403.17	ENSMUST00000068261.9	1528	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGGTGAAAGCAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	35455537	35457743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35455822_35456092_35456194_35456600
ENSMUST00000068333.14	chr1	-	1951	17	FSM	ENSMUSG00000026245.17	ENSMUST00000068333.14	1951	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGCCAGCGTGTGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	78465534	78401704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ENSMUST00000068408.14	chr10	+	500	4	FSM	ENSMUSG00000063457.15	ENSMUST00000068408.14	500	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80128286	80129948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80128318_80128608_80128695_80129475_80129711_80129800
ENSMUST00000068487.12	chr6	-	2577	14	FSM	ENSMUSG00000030254.17	ENSMUST00000068487.12	2577	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGCAATGTGTAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	112673631	112596935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ENSMUST00000068505.10	chr1	-	3225	21	FSM	ENSMUSG00000026509.16	ENSMUST00000068505.10	3225	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGCACCATGCCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	182345089	182294824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_182295801_182297743_182297803_182298243_182298361_182300085_182300165_182300488_182300558_182301446_182301512_182304815_182304874_182306112_182306179_182307270_182307308_182309011_182309224_182310100_182310113_182311767_182311938_182314108_182314270_182315279_182315355_182316558_182316645_182317529_182317614_182318431_182318601_182319626_182319761_182320316_182320436_182339771_182339842_182344682
ENSMUST00000068513.11	chr2	-	1872	15	FSM	ENSMUSG00000040272.15	ENSMUST00000068513.11	1872	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTCTTCATTCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	93680024	93665782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93670367_93670469_93671653_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678553_93679954
ENSMUST00000068532.10	chr14	+	1324	6	FSM	ENSMUSG00000055128.16	ENSMUST00000068532.10	1324	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGACACTGTCTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	47069581	47091650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_47069837_47077613_47077754_47083330_47083509_47083641_47083790_47090835_47090944_47091155
ENSMUST00000068798.13	chr3	+	1500	6	FSM	ENSMUSG00000027942.18	ENSMUST00000068798.13	1500	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGATCATTTCTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	89960177	89969749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89965791_89965959_89966048_89966108_89968944
ENSMUST00000068958.9	chr17	-	2265	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1705	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAACGTGTTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	79662520	79641155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_79643146_79662245
ENSMUST00000069011.9	chr14	+	1094	2	FSM	ENSMUSG00000072115.12	ENSMUST00000069011.9	1094	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAGTCAGTCTGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	51333456	51339462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_51333931_51338842
ENSMUST00000069430.15	chr12	+	2869	25	FSM	ENSMUSG00000021000.18	ENSMUST00000069430.15	2869	25	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGTTTGGTATTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	59176548	59236962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_59176683_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193121_59193149_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ENSMUST00000069449.7	chr7	-	2275	6	FSM	ENSMUSG00000055723.7	ENSMUST00000069449.7	2275	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGCTTGACGGCTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	113717016	113646016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_113647487_113649535_113649655_113657774_113657884_113658161_113658265_113659566_113659655_113716630
ENSMUST00000069503.13	chr11	+	1871	9	FSM	ENSMUSG00000020513.16	ENSMUST00000069503.13	1871	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCAGTCTGTTAAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	86435816	86458186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_86436057_86439608_86439829_86440149_86440298_86443613_86443831_86445898_86446131_86448550_86448716_86452061_86452203_86456510_86456695_86457862
ENSMUST00000069579.7	chr17	-	537	4	FSM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTCTCATTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	24048110	24043711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24043954_24046441_24046548_24047817_24047953_24048056
ENSMUST00000069595.13	chr6	-	1191	4	FSM	ENSMUSG00000055850.13	ENSMUST00000069595.13	1191	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	72339376	72336696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72339299
ENSMUST00000069722.13	chrX	+	1851	10	FSM	ENSMUSG00000009995.18	ENSMUST00000069722.13	1851	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTCTGTGTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	73326302	73333757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332267_73332321_73332710_73332789_73332904
ENSMUST00000069929.13	chr13	-	899	8	FSM	ENSMUSG00000021493.16	ENSMUST00000069929.13	899	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGCCTCTGTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	55661247	55654586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_55654937_55655142_55655180_55655300_55655438_55655676_55655694_55656592_55656624_55656704_55656857_55660124_55660232_55661179
ENSMUST00000069968.13	chr13	-	1006	8	FSM	ENSMUSG00000021493.16	ENSMUST00000069968.13	1006	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCCTCTGTCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	55661251	55654585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_55654937_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
ENSMUST00000070039.14	chr17	-	1939	8	FSM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGAGTCTTGAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78725560	78685313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
ENSMUST00000070112.6	chr2	-	861	4	FSM	ENSMUSG00000026895.8	ENSMUST00000070112.6	861	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTGTTTTATTATGCT	NA	NA	NA	NA	NA	NA	NA	NA	35939418	35926337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_35926654_35929723_35929890_35934361_35934526_35939203
ENSMUST00000070118.14	chr19	+	1781	10	FSM	ENSMUSG00000024909.16	ENSMUST00000070118.14	1781	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCTGAGGTGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	5524777	5531881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ENSMUST00000070395.9	chr11	-	1516	12	FSM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTATACTGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	101308441	101297664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
ENSMUST00000070487.12	chr5	+	1606	7	FSM	ENSMUSG00000029625.17	ENSMUST00000070487.12	1606	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	145104033	145118851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112920_145113015_145114039_145114113_145115645_145115739_145117945
ENSMUST00000070532.8	chr4	+	823	4	FSM	ENSMUSG00000028773.9	ENSMUST00000070532.8	823	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTTGGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	130202387	130209256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_130202644_130206083_130206257_130207746_130207849_130208964
ENSMUST00000070552.14	chr11	-	4097	14	FSM	ENSMUSG00000020435.18	ENSMUST00000070552.14	4097	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTTGCAGAGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	3813903	3653730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_3655208_3655388_3655616_3661693_3661870_3661957_3662054_3662125_3662230_3662458_3662580_3664470_3664717_3665087_3665235_3665496_3665552_3667096_3667215_3667793_3667987_3676318_3676576_3769836_3770046_3813232
ENSMUST00000070642.4	chr2	+	1504	1	FSM	ENSMUSG00000056501.4	ENSMUST00000070642.4	1504	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	388	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGGCAGTAGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	167530834	167532338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_167530800_167532300
ENSMUST00000070656.12	chr7	+	3026	10	FSM	ENSMUSG00000030782.18	ENSMUST00000070656.12	3026	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCCAGAGAACCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	127846042	127852884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_127847465_127847591_127847645_127847749_127847893_127848058_127848147_127848261_127848368_127848471_127848667_127851248_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUST00000070713.8	chr8	+	4192	18	FSM	ENSMUSG00000031864.17	ENSMUST00000070713.8	4192	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGGCCTAATGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	69246665	69282060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69277703_69277782_69279928
ENSMUST00000070777.13	chr17	-	2384	19	FSM	ENSMUSG00000052752.16	ENSMUST00000070777.13	2384	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	24738182	24727823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24735478_24735574_24737715_24737774_24738104
ENSMUST00000070801.11	chrX	+	1802	4	FSM	ENSMUSG00000041718.17	ENSMUST00000070801.11	1802	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	143100799	143108193	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_143101118_143102894_143103058_143105007_143105147_143107011
ENSMUST00000070877.7	chr15	+	2577	5	FSM	ENSMUSG00000022244.8	ENSMUST00000070877.7	2577	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAATCACCAATGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	10981841	10996712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_10982140_10983435_10983580_10984771_10984933_10988844_10989032_10994925
ENSMUST00000070878.9	chr19	-	642	6	FSM	ENSMUSG00000056629.17	ENSMUST00000070878.9	642	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTGAGTCTGTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	6957808	6955108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956546_6957761
ENSMUST00000070918.14	chr15	+	1155	6	FSM	ENSMUSG00000022235.16	ENSMUST00000070918.14	1155	6	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGCGTAGCTTCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	31568943	31590265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_31569086_31581985_31582220_31584110_31584219_31585440_31585584_31588313_31588406_31589829
ENSMUST00000070951.8	chr13	+	1272	6	FSM	ENSMUSG00000021759.15	ENSMUST00000070951.8	1272	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTACAGACCATTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	112937396	113004176	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_112937801_112987936_112988089_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ENSMUST00000070996.11	chr11	-	1373	7	FSM	ENSMUSG00000078812.11	ENSMUST00000070996.11	1373	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	69812212	69807545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69810274_69810305_69811988
ENSMUST00000071026.10	chr11	-	1286	7	FSM	ENSMUSG00000078812.11	ENSMUST00000071026.10	1286	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	69812784	69807545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69810274_69810305_69812647
ENSMUST00000071044.13	chr6	+	1247	10	FSM	ENSMUSG00000056737.15	ENSMUST00000071044.13	1247	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTGGCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	72521373	72539966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_72521450_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ENSMUST00000071081.13	chr5	+	1311	8	FSM	ENSMUSG00000029152.14	ENSMUST00000071081.13	1311	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGGCTTTGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	73450126	73471300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464142_73470785
ENSMUST00000071130.5	chr5	+	1251	5	FSM	ENSMUSG00000060063.10	ENSMUST00000071130.5	1251	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGAGTCTTTTATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	149201576	149224963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_149201993_149209190_149209291_149215985_149216057_149222153_149222236_149224381
ENSMUST00000071204.12	chrX	-	2483	16	FSM	ENSMUSG00000062168.13	ENSMUST00000071204.12	2483	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAATTGTTTTTTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	159502968	159406089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_159406700_159407559_159407645_159408672_159408837_159414850_159414958_159416189_159416333_159418003_159418190_159421154_159421302_159424846_159424997_159426263_159426301_159429626_159429794_159455573_159455621_159459628_159459744_159468165_159468336_159474491_159474553_159476482_159476611_159502802
ENSMUST00000071215.5	chr14	+	616	3	FSM	ENSMUSG00000063787.5	ENSMUST00000071215.5	616	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCATTTCTTCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	20753073	20754493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_20753266_20753357_20753477_20754188
ENSMUST00000071263.7	chr5	+	1661	1	FSM	ENSMUSG00000061118.9	ENSMUST00000071263.7	1661	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	449	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGAGTGTGGTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	135093055	135094716	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_135093100_135094700
ENSMUST00000071267.14	chr19	+	1508	9	FSM	ENSMUSG00000024805.17	ENSMUST00000071267.14	1508	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCCAGCTTATTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	36356467	36433604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_36356560_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
ENSMUST00000071442.12	chr2	+	1485	9	FSM	ENSMUSG00000015094.17	ENSMUST00000071442.12	1485	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTTCTGGGTTCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	25293082	25299506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_25293378_25296226_25296374_25297607_25297749_25297852_25298027_25298125_25298193_25298271_25298360_25298618_25298699_25298916_25299014_25299110
ENSMUST00000071492.9	chr6	+	1643	3	FSM	ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTCTTATGGGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	86342627	86347040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_86342802_86343591_86343733_86345712
ENSMUST00000071544.11	chr4	+	942	6	FSM	ENSMUSG00000028483.14	ENSMUST00000071544.11	942	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTCTAGTCCCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	83335967	83360323	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123
ENSMUST00000071792.7	chr15	+	1043	5	FSM	ENSMUSG00000063236.7	ENSMUST00000071792.7	1043	5	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGATGGTGTGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	76832705	76834929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76832745_76832828_76833120_76833267_76833353_76833743_76833891_76834448
ENSMUST00000071798.13	chr7	-	1027	14	FSM	ENSMUSG00000064179.14	ENSMUST00000071798.13	1027	14	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTGGGAGTACAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	4518974	4507568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513380_4515263_4515283_4516579_4516613_4516809_4516837_4517211_4517226_4517335_4517379_4518929
ENSMUST00000071881.10	chr5	+	952	4	FSM	ENSMUSG00000036639.13	ENSMUST00000071881.10	952	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTGTGACTACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	140317614	140323892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_140317711_140320209_140320375_140321067_140321214_140323347
ENSMUST00000071949.5	chr5	-	1273	1	FSM	ENSMUSG00000060708.5	ENSMUST00000071949.5	1273	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	447	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTCCTTCTGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	36905994	36904721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_36904700_36906000
ENSMUST00000071951.14	chr17	+	1497	7	FSM	ENSMUSG00000060550.17	ENSMUST00000071951.14	1497	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAATAAATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	35658130	35662710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35658261_35658427_35658698_35658884_35659161_35661242_35661528_35661653_35661771_35661942_35661976_35662324
ENSMUST00000071977.9	chr4	+	1073	9	FSM	ENSMUSG00000060572.18	ENSMUST00000071977.9	1073	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCGTCCAGGGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	140737954	140743295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_140738033_140740136_140740213_140741083_140741171_140741366_140741394_140741499_140741581_140741705_140741760_140742293_140742382_140742525_140742600_140742787
ENSMUST00000072020.9	chr10	-	2015	14	FSM	ENSMUSG00000034758.13	ENSMUST00000072020.9	2015	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	NA	NA	NA	NA	NA	NA	NA	81436734	81426738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
ENSMUST00000072040.7	chr12	+	1509	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAATCTTTAGTCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	105976486	106041479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ENSMUST00000072111.8	chr2	+	2277	6	FSM	ENSMUSG00000026811.19	ENSMUST00000072111.8	2277	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGTGTTCTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	32498082	32510816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32498109_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
ENSMUST00000072298.13	chr2	-	2586	16	FSM	ENSMUSG00000027634.15	ENSMUST00000072298.13	2586	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	156833976	156769264	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ENSMUST00000072406.5	chr17	-	3255	14	FSM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAATTTTCTTCGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	85397649	85370897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
ENSMUST00000072452.11	chr2	+	1606	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTTGGCTTGTACTTA	NA	NA	NA	NA	NA	NA	NA	NA	164302890	164307428	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
ENSMUST00000072465.9	chr9	+	1425	6	FSM	ENSMUSG00000057982.9	ENSMUST00000072465.9	1425	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTTGTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	22137066	22154650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837_22150550_22154329
ENSMUST00000072503.13	chr7	+	679	6	FSM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGTGTTCATTCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	45367494	45370259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
ENSMUST00000072530.11	chr14	+	2601	15	FSM	ENSMUSG00000022214.16	ENSMUST00000072530.11	2601	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGTGTCTGTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	55798385	55807519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_55798433_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUST00000072581.9	chr11	+	1311	11	FSM	ENSMUSG00000023170.15	ENSMUST00000072581.9	1311	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTACCCACCATCATG	NA	NA	NA	NA	NA	NA	NA	NA	69804713	69807402	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69804901_69805098_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
ENSMUST00000072585.8	chr9	-	1920	12	FSM	ENSMUSG00000056131.14	ENSMUST00000072585.8	1920	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTTTCGATTGCTTACC	NA	NA	NA	NA	NA	NA	NA	NA	86453881	86437053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_86437457_86438244_86438419_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ENSMUST00000072587.5	chr3	-	405	2	FSM	ENSMUSG00000054312.7	ENSMUST00000072587.5	405	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1523	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAAGGCTTGGACATA	NA	NA	NA	NA	NA	NA	NA	NA	95777931	95769965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95770245_95777805
ENSMUST00000072744.15	chr12	-	2524	20	FSM	ENSMUSG00000021038.18	ENSMUST00000072744.15	2524	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTCCCCATCTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	87313030	87285646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
ENSMUST00000072841.12	chr11	+	1454	12	FSM	ENSMUSG00000060600.16	ENSMUST00000072841.12	1454	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGTGTTCCTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	70548027	70553339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70548094_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ENSMUST00000072916.5	chr11	-	732	5	FSM	ENSMUSG00000014243.6	ENSMUST00000072916.5	732	5	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1361	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATCAAGTTATTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	62172201	62158049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_62158433_62159529_62159635_62164537_62164641_62167443_62167466_62172082
ENSMUST00000073139.14	chr8	+	2966	15	FSM	ENSMUSG00000036564.18	ENSMUST00000073139.14	2966	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCAGCGTCATGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	96429664	96441747	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_96429806_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96438952_96438992_96439805
ENSMUST00000073371.7	chr16	-	1922	3	FSM	ENSMUSG00000065979.13	ENSMUST00000073371.7	1922	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACATTGCTTCTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	11727309	11702086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_11703610_11705441_11705661_11727129
ENSMUST00000073392.11	chrX	-	2926	17	FSM	ENSMUSG00000031174.18	ENSMUST00000073392.11	2926	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGCTTGGAAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	10083159	10024454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_10025120_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
ENSMUST00000073430.14	chr19	+	2112	10	FSM	ENSMUSG00000010110.18	ENSMUST00000073430.14	2112	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	8719166	8733006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ENSMUST00000073471.13	chr11	+	526	4	FSM	ENSMUSG00000060938.15	ENSMUST00000073471.13	526	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCTTGTGTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	68792408	68795360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_68792451_68793095_68793269_68794004_68794146_68795190
ENSMUST00000073488.12	chr7	-	1999	10	FSM	ENSMUSG00000060601.14	ENSMUST00000073488.12	1999	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	44203373	44199039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202179_44203002_44203133_44203232
ENSMUST00000073570.12	chr17	+	1197	6	FSM	ENSMUSG00000073423.11	ENSMUST00000073570.12	1197	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGAGTGCTCTTCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	33848063	33850753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ENSMUST00000073660.7	chr11	+	2568	11	FSM	ENSMUSG00000061981.15	ENSMUST00000073660.7	2568	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	77928809	77951260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_77928939_77940303_77940386_77944188_77944280_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ENSMUST00000073791.10	chr11	-	659	6	FSM	ENSMUSG00000034566.11	ENSMUST00000073791.10	659	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	115310788	115306514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309377_115310717
ENSMUST00000073881.8	chr4	+	1052	8	FSM	ENSMUSG00000006392.17	ENSMUST00000073881.8	1052	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCCATTCCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	118266551	118272306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_118266584_118268081_118268201_118268722_118268771_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118270923_118271920
ENSMUST00000073926.8	chr10	-	490	7	FSM	ENSMUSG00000061983.8	ENSMUST00000073926.8	490	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGATTTTTCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	23663086	23661102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662522_23662538_23662661_23662779_23662891_23662943_23663053
ENSMUST00000074072.5	chr13	-	561	1	FSM	ENSMUSG00000069117.5	ENSMUST00000074072.5	561	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2873	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCAATCAGATTCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	97897140	97896579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_97896600_97897100
ENSMUST00000074085.12	chrX	+	855	6	FSM	ENSMUSG00000008682.14	ENSMUST00000074085.12	855	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	73314465	73316741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ENSMUST00000074187.13	chr7	+	1007	15	FSM	ENSMUSG00000061723.19	ENSMUST00000074187.13	1007	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTATGTGTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	142052572	142069745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_142052637_142055356_142055392_142055565_142055580_142057784_142057803_142057986_142058002_142059024_142059037_142062071_142062091_142064400_142064447_142064993_142065111_142065201_142065280_142065772_142065887_142065992_142066103_142066268_142066360_142068062_142068104_142069512
ENSMUST00000074231.6	chr6	-	553	4	FSM	ENSMUSG00000073002.10	ENSMUST00000074231.6	553	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAATGCTCTCTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	72357451	72346016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_72346163_72346272_72346454_72347176_72347315_72357363
ENSMUST00000074249.7	chr7	-	2063	3	FSM	ENSMUSG00000078580.4	ENSMUST00000074249.7	2063	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTATGACATGTACCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	126992801	126990078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126991688_126992172_126992287_126992461
ENSMUST00000074259.15	chr17	+	1466	4	FSM	ENSMUSG00000059791.15	ENSMUST00000074259.15	1466	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTGTCTGTCCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	36172209	36176294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_36172410_36174330_36174528_36175003_36175181_36175402
ENSMUST00000074371.13	chr19	+	2408	12	FSM	ENSMUSG00000024975.14	ENSMUST00000074371.13	2408	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTTAGTGGGAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	53880661	53918282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_53880888_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53914965_53915077_53915624_53915765_53917513
ENSMUST00000074455.9	chr7	-	2777	5	FSM	ENSMUSG00000066838.8	ENSMUST00000074455.9	2777	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCATGACTATTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	7212997	7205115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523_7210563_7212716
ENSMUST00000074606.11	chr2	-	1354	6	FSM	ENSMUSG00000060703.13	ENSMUST00000074606.11	1354	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTGGTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	60114832	60082336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_60082836_60085414_60085442_60087376_60087548_60088226_60088344_60102445_60102557_60114403
ENSMUST00000074680.8	chr13	+	795	1	FSM	ENSMUSG00000059751.8	ENSMUST00000074680.8	795	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5551	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAGATTTTTAATAGTG	NA	NA	NA	NA	NA	NA	NA	NA	108807136	108807931	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_108807100_108807900
ENSMUST00000074854.9	chr2	-	926	8	FSM	ENSMUSG00000063275.16	ENSMUST00000074854.9	926	8	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTCAGAAAAACCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	14060946	14031712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_14031818_14040589_14040769_14045644_14045767_14049593_14049683_14049758_14049778_14049948_14050067_14060541_14060791_14060901
ENSMUST00000075280.12	chr19	-	1018	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACTGGAAAAAATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	41921735	41912004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ENSMUST00000075281.8	chr12	+	3321	16	FSM	ENSMUSG00000007411.17	ENSMUST00000075281.8	3321	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCTTGCACTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	111540956	111622652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
ENSMUST00000075418.15	chr7	+	2483	6	FSM	ENSMUSG00000046027.18	ENSMUST00000075418.15	2483	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGAGTTCCTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	83281166	83291536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289629
ENSMUST00000075550.4	chr13	-	1251	9	FSM	ENSMUSG00000045273.9	ENSMUST00000075550.4	1251	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGGACTGGAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	100912407	100896181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100908162_100908212_100909233_100909290_100912194
ENSMUST00000075610.13	chr7	+	1135	6	FSM	ENSMUSG00000063179.14	ENSMUST00000075610.13	1135	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGATTTGGATAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	130972869	130989568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_130973119_130975264_130975560_130975793_130975993_130985653_130985730_130986228_130986323_130989346
ENSMUST00000075630.10	chr15	-	441	4	FSM	ENSMUSG00000062683.12	ENSMUST00000075630.10	441	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTGTCTCCACTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	102576184	102571448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145
ENSMUST00000075759.13	chr2	+	6327	11	FSM	ENSMUSG00000026842.17	ENSMUST00000075759.13	6327	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTTGGTCTGTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	31578562	31693553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_31579955_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ENSMUST00000075805.13	chr1	-	4986	5	FSM	ENSMUSG00000026586.17	ENSMUST00000075805.13	4986	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTCTTTTGTTATAATA	NA	NA	NA	NA	NA	NA	NA	NA	163141241	163072687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_163075966_163081545_163081618_163085329_163085512_163089408_163089585_163139963
ENSMUST00000075829.3	chr10	-	666	6	FSM	ENSMUSG00000062981.6	ENSMUST00000075829.3	666	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	95337789	95316667	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337751
ENSMUST00000075843.13	chr8	-	3000	20	FSM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCACGTTTGCTGGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	84467798	84449990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84458531_84458667_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ENSMUST00000075962.9	chr13	+	483	1	FSM	ENSMUSG00000094446.2	ENSMUST00000075962.9	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	791	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGCTCCTGCCAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	55233589	55234072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_55233600_55234100
ENSMUST00000076052.8	chr7	+	2967	9	FSM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATTTATATTAATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	92524459	92583791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ENSMUST00000076183.12	chr4	-	2466	17	FSM	ENSMUSG00000058498.13	ENSMUST00000076183.12	2466	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAGTACAGTGATCACT	NA	NA	NA	NA	NA	NA	NA	NA	152403065	152391475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_152392074_152393294_152393361_152395840_152395959_152396228_152396281_152396527_152396714_152396846_152397034_152397643_152397742_152397820_152397890_152398335_152398405_152398492_152398566_152399498_152399546_152399848_152399975_152400059_152400136_152400207_152400290_152400375_152400521_152402117_152402251_152402724
ENSMUST00000076260.12	chr12	-	1921	7	FSM	ENSMUSG00000062352.16	ENSMUST00000076260.12	1921	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGCTTTCCTTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	21336285	21319806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21336106
ENSMUST00000076265.13	chrX	-	2344	10	FSM	ENSMUSG00000036572.17	ENSMUST00000076265.13	2344	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTTTATTTATTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	36373975	36355330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_36356315_36359174_36359476_36360510_36360672_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ENSMUST00000076306.12	chr5	-	2838	14	FSM	ENSMUSG00000028944.15	ENSMUST00000076306.12	2838	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTTTTATGTATATGA	NA	NA	NA	NA	NA	NA	NA	NA	25200751	25067745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320_25113391_25152421_25152637_25200259
ENSMUST00000076333.12	chr16	-	5347	19	FSM	ENSMUSG00000033149.18	ENSMUST00000076333.12	5347	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGTTGCTTGATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	45664597	45566756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45594525_45594709_45595330_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ENSMUST00000076532.14	chr13	-	1504	8	FSM	ENSMUSG00000060147.16	ENSMUST00000076532.14	1504	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGTCTGCCTCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	34186777	34101900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34180225_34180335_34186652
ENSMUST00000076657.11	chr7	+	515	4	FSM	ENSMUSG00000035674.14	ENSMUST00000076657.11	515	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGAATCTGTTTATTGGG	NA	NA	NA	NA	NA	NA	NA	NA	3620371	3623326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_3620407_3620615_3620691_3622428_3622507_3622999
ENSMUST00000076702.12	chr12	+	828	5	FSM	ENSMUSG00000064215.14	ENSMUST00000076702.12	828	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGTGGAAATAAATTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	103400469	103406466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_103400610_103401680_103401833_103402821_103402942_103405659_103405822_103406212
ENSMUST00000076715.13	chr8	-	1403	9	FSM	ENSMUSG00000001911.17	ENSMUST00000076715.13	1403	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTCCTCAAAATGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	85526769	85435242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85435307_85440394_85440487_85448271_85448448_85453097_85453235_85453752_85453874_85454233_85454309_85454533_85454597_85498412_85498945_85526626
ENSMUST00000076757.12	chr16	+	894	5	FSM	ENSMUSG00000003531.16	ENSMUST00000076757.12	894	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCTGTGCTACCTA	NA	NA	NA	NA	NA	NA	NA	NA	17883022	17889206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_17883049_17884559_17884721_17887287_17887389_17887954_17888096_17888741
ENSMUST00000076813.8	chr12	+	1141	6	FSM	ENSMUSG00000062054.8	ENSMUST00000076813.8	1141	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCACAATTTTATAAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	21366389	21373820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770_21369933_21371334_21371457_21373289
ENSMUST00000076831.7	chr7	-	1025	3	FSM	ENSMUSG00000063838.7	ENSMUST00000076831.7	1025	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTATTCACTTTACGC	NA	NA	NA	NA	NA	NA	NA	NA	4167859	4154258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_4154787_4167091_4167187_4167457
ENSMUST00000076842.7	chr18	-	879	1	FSM	ENSMUSG00000091957.4	ENSMUST00000076842.7	879	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22446	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGTTTTTATATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	61393032	61392153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_61392200_61393000
ENSMUST00000076942.5	chr15	-	1641	2	FSM	ENSMUSG00000022237.18	ENSMUST00000076942.5	1641	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTAGTGTGCGCCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	31367714	31324091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_31325203_31367184
ENSMUST00000077088.11	chr6	-	2577	12	FSM	ENSMUSG00000030254.17	ENSMUST00000077088.11	2577	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCCTTTGTTTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	112673647	112596810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_112597866_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ENSMUST00000077191.7	chr7	+	1484	8	FSM	ENSMUSG00000064254.7	ENSMUST00000077191.7	1484	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	798	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGTTCTGCTTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	24286967	24308350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_24287233_24293051_24293437_24293842_24293988_24294424_24294574_24305629_24305760_24307292_24307383_24307776_24307894_24308147
ENSMUST00000077208.6	chr8	-	449	1	FSM	ENSMUSG00000059775.6	ENSMUST00000077208.6	449	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6723	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAACTTTTTATCGCT	NA	NA	NA	NA	NA	NA	NA	NA	108166211	108165762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_108165800_108166200
ENSMUST00000077243.5	chrX	-	1032	7	FSM	ENSMUSG00000031371.15	ENSMUST00000077243.5	1032	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCCTTCGGACTACT	NA	NA	NA	NA	NA	NA	NA	NA	72502650	72480920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_72481172_72489415_72489531_72490533_72490744_72496604_72496667_72498472_72498541_72501579_72501696_72502440
ENSMUST00000077353.15	chr9	-	1605	14	FSM	ENSMUSG00000032126.17	ENSMUST00000077353.15	1605	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTTCTGTTGTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	44255525	44247635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
ENSMUST00000077367.11	chr3	+	1779	11	FSM	ENSMUSG00000028048.12	ENSMUST00000077367.11	1779	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTCCTGTGCTATCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	89110234	89115986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ENSMUST00000077577.8	chr15	-	1743	4	FSM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGGATACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	98832446	98829305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98830444_98830572_98830722_98830853_98831077_98832213
ENSMUST00000077680.10	chrX	+	3277	10	FSM	ENSMUSG00000000134.18	ENSMUST00000077680.10	3277	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTCCCGTTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	7628896	7641441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUST00000077755.11	chr1	+	1914	4	FSM	ENSMUSG00000008475.14	ENSMUST00000077755.11	1914	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGTAACTCTCCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	152642292	152651348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_152642619_152644611_152644685_152647114_152647292_152650010
ENSMUST00000077839.13	chr10	-	1813	4	FSM	ENSMUSG00000075000.12	ENSMUST00000077839.13	1813	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTGAGTATGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	67121084	67102467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_67103946_67105884_67105926_67111348_67111434_67120875
ENSMUST00000077856.13	chr11	+	614	5	FSM	ENSMUSG00000063316.14	ENSMUST00000077856.13	614	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	101333123	101336355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101333283_101333548_101333632_101334326_101334497_101336045_101336157_101336264
ENSMUST00000077915.10	chr11	+	364	5	FSM	ENSMUSG00000057322.13	ENSMUST00000077915.10	364	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	114559373	114563157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_114559453_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ENSMUST00000077938.10	chr17	-	1405	9	FSM	ENSMUSG00000061046.10	ENSMUST00000077938.10	1405	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGCAGGTCTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	26004647	26001762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977_26004169_26004401
ENSMUST00000077967.13	chr7	+	2647	8	FSM	ENSMUSG00000053091.17	ENSMUST00000077967.13	2647	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCGTGTCTGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	66339705	66364492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359906_66360495_66361620_66361793_66363548
ENSMUST00000078074.9	chr2	+	2018	8	FSM	ENSMUSG00000064289.16	ENSMUST00000078074.9	2018	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTCTGATGGGATTTA	NA	NA	NA	NA	NA	NA	NA	NA	61408929	61484515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_61409038_61443994_61444143_61457246_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
ENSMUST00000078155.12	chr6	-	2437	14	FSM	ENSMUSG00000003500.14	ENSMUST00000078155.12	2437	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGATCCTGTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	29212296	29200435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067
ENSMUST00000078185.14	chr10	-	3163	9	FSM	ENSMUSG00000055053.19	ENSMUST00000078185.14	3163	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATCCATTA	NA	NA	NA	NA	NA	NA	NA	NA	81262948	81234971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81262909
ENSMUST00000078200.12	chr7	+	2363	19	FSM	ENSMUSG00000053046.17	ENSMUST00000078200.12	2363	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGGCAGGTAAGGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	141503487	141552742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_141503917_141535273_141535369_141536717_141536804_141538130_141538272_141538585_141538703_141539170_141539205_141539446_141539516_141539622_141539770_141541158_141541191_141541487_141541653_141541850_141541949_141542022_141542174_141545976_141546038_141546848_141547057_141547451_141547501_141550625_141550750_141552114_141552296_141552369_141552460_141552656
ENSMUST00000078218.11	chr15	+	1371	12	FSM	ENSMUSG00000058586.13	ENSMUST00000078218.11	1371	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCAAGTGGCTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	82984404	83000875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_82984549_82985844_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82987210_82988509_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
ENSMUST00000078434.8	chr14	-	1970	14	FSM	ENSMUSG00000022092.12	ENSMUST00000078434.8	1970	14	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATAAAATACTT	NA	NA	NA	NA	NA	NA	NA	NA	70526920	70455346	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_70455727_70457465_70457496_70461758_70461857_70462415_70462498_70472588_70472658_70473926_70474053_70478177_70478273_70478352_70478431_70483301_70483442_70485022_70485169_70493808_70493921_70504078_70504204_70504757_70504956_70526629
ENSMUST00000078459.8	chr17	-	1400	9	FSM	ENSMUSG00000058704.10	ENSMUST00000078459.8	1400	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	NA	NA	NA	NA	NA	NA	NA	NA	74601785	74507696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_74508321_74509255_74509361_74527482_74527536_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
ENSMUST00000078497.15	chr7	+	1067	17	FSM	ENSMUSG00000061723.19	ENSMUST00000078497.15	1067	17	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTATGTGTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	142052572	142069745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_142052637_142055356_142055392_142055565_142055580_142056476_142056495_142057784_142057803_142057986_142058002_142059252_142059268_142061486_142061526_142062071_142062091_142064400_142064447_142064993_142065111_142065201_142065280_142065772_142065887_142065992_142066103_142066268_142066360_142068062_142068104_142069512
ENSMUST00000078509.12	chr17	-	2403	16	FSM	ENSMUSG00000024039.16	ENSMUST00000078509.12	2403	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGTGTCGACCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	31856139	31831614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ENSMUST00000078589.7	chr8	-	523	3	FSM	ENSMUSG00000014633.16	ENSMUST00000078589.7	523	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCACTGGACAGCGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	117648178	117616271	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_117616599_117637866_117637974_117648089
ENSMUST00000078676.6	chr4	-	547	4	FSM	ENSMUSG00000063882.13	ENSMUST00000078676.6	547	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2741	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTCCTTCCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	115932268	115924161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_115924370_115927059_115927222_115927933_115927955_115932112
ENSMUST00000078687.6	chr2	+	2063	4	FSM	ENSMUSG00000027573.12	ENSMUST00000078687.6	2063	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAATGGCTTCTAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	180354338	180360523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_180355114_180356482_180356680_180358651_180358850_180359630
ENSMUST00000078729.9	chr13	-	472	1	FSM	ENSMUSG00000078180.5	ENSMUST00000078729.9	472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1761	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGTCCAGATGGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	120766201	120765729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_120765700_120766200
ENSMUST00000078764.9	chr13	-	433	3	FSM	ENSMUSG00000017778.15	ENSMUST00000078764.9	433	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGCCTCGTCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	86194579	86192934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_86193028_86193845_86193989_86194382
ENSMUST00000078766.10	chr9	+	467	1	FSM	ENSMUSG00000058838.10	ENSMUST00000078766.10	467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTGTGTATGCGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	83291712	83292179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_83291700_83292200
ENSMUST00000078804.12	chr16	+	491	5	FSM	ENSMUSG00000060636.15	ENSMUST00000078804.12	491	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTCTCTTTGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	32876822	32880559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_32876881_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ENSMUST00000078944.13	chrX	+	4350	11	FSM	ENSMUSG00000025626.17	ENSMUST00000078944.13	4350	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGTCTGCTTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	52001142	52045820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_52001314_52005429_52005614_52006042_52006145_52020449_52020584_52020857_52020902_52029101_52029269_52029413_52029558_52031440_52031546_52034760_52034895_52042328_52042456_52042782
ENSMUST00000078945.12	chr5	-	2538	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTATATTTTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	88824030	88807306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
ENSMUST00000079130.14	chr16	-	1459	6	FSM	ENSMUSG00000063445.15	ENSMUST00000079130.14	1459	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTTCCCAAAAGAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	4537220	4529180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_4529468_4531503_4531695_4532280_4532531_4533464_4533495_4534160_4534400_4536758
ENSMUST00000079213.6	chr4	-	1516	10	FSM	ENSMUSG00000063800.6	ENSMUST00000079213.6	1516	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCTTTTTGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	108436533	108422066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
ENSMUST00000079282.8	chr7	-	4255	20	FSM	ENSMUSG00000031024.14	ENSMUST00000079282.8	4255	20	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTGTGTTCCTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	109216354	109123117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264
ENSMUST00000079327.12	chr19	+	2639	10	FSM	ENSMUSG00000024947.18	ENSMUST00000079327.12	2639	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	6385042	6390919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6385113_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ENSMUST00000079419.12	chr14	+	883	4	FSM	ENSMUSG00000012405.17	ENSMUST00000079419.12	883	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	4198666	4200736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_4198874_4199235_4199418_4199652_4199790_4200379
ENSMUST00000079703.11	chr15	+	1054	7	FSM	ENSMUSG00000059586.11	ENSMUST00000079703.11	1054	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	59246135	59473533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
ENSMUST00000079716.6	chr18	+	775	7	FSM	ENSMUSG00000062328.9	ENSMUST00000079716.6	775	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGACTGTCTAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	75133547	75136452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_75133615_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
ENSMUST00000079724.9	chr3	-	1139	7	FSM	ENSMUSG00000027944.14	ENSMUST00000079724.9	1139	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGTTTTGTCAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	89906004	89902752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834
ENSMUST00000079777.12	chr8	+	3394	21	FSM	ENSMUSG00000025812.19	ENSMUST00000079777.12	3394	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCATACCAGACTCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	127790805	128159306	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128159275
ENSMUST00000079883.12	chr10	+	1804	7	FSM	ENSMUSG00000113949.2	ENSMUST00000079883.12	1804	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	80438713	80451617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ENSMUST00000079896.9	chr8	+	916	5	FSM	ENSMUSG00000025521.16	ENSMUST00000079896.9	916	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAATGTTTTGTATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	65399905	65421683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65418190_65418294_65421362
ENSMUST00000079924.8	chr17	-	2007	12	FSM	ENSMUSG00000062202.15	ENSMUST00000079924.8	2007	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACCCCAGGCCTTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	30795143	30439029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_30439119_30439318_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
ENSMUST00000079949.13	chr11	-	2588	17	FSM	ENSMUSG00000009079.17	ENSMUST00000079949.13	2588	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTCCTCCTCTGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	5049266	5019688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ENSMUST00000079976.10	chr2	-	1884	8	FSM	ENSMUSG00000002105.16	ENSMUST00000079976.10	1884	8	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	NA	NA	NA	NA	NA	NA	NA	NA	90900574	90892135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895926_90896060_90896357_90896472_90900499
ENSMUST00000080001.9	chr1	-	1007	7	FSM	ENSMUSG00000062963.11	ENSMUST00000080001.9	1007	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGATG	NA	NA	NA	NA	NA	NA	NA	NA	171122597	171116135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171117521_171117721_171117790_171122206_171122401_171122493
ENSMUST00000080058.11	chr7	-	2107	6	FSM	ENSMUSG00000058709.12	ENSMUST00000080058.11	2107	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	26866227	26858082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26866108
ENSMUST00000080138.13	chr1	+	993	4	FSM	ENSMUSG00000033701.14	ENSMUST00000080138.13	993	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	155433865	155448034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155447943
ENSMUST00000080149.6	chr4	+	1902	8	FSM	ENSMUSG00000063524.14	ENSMUST00000080149.6	1902	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	150327942	150333330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ENSMUST00000080202.12	chr11	-	1727	10	FSM	ENSMUSG00000025138.15	ENSMUST00000080202.12	1727	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	120515840	120509197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120509876_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
ENSMUST00000080281.14	chr14	+	1922	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTTATCTTTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	4198628	4201873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
ENSMUST00000080348.12	chr7	-	2591	4	FSM	ENSMUSG00000034071.16	ENSMUST00000080348.12	2591	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAAAAAAAAAAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	12156678	12149079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_12151146_12152469_12152594_12155734_12155774_12156316
ENSMUST00000080353.3	chr8	-	2812	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATGTCCTCCATCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	48128193	48120212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_48122372_48127540
ENSMUST00000080356.10	chr7	-	1365	7	FSM	ENSMUSG00000061479.16	ENSMUST00000080356.10	1365	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	26895696	26886431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895415
ENSMUST00000080411.13	chrX	-	1859	4	FSM	ENSMUSG00000031422.17	ENSMUST00000080411.13	1859	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	135642101	135633701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641958
ENSMUST00000080437.13	chr7	-	5004	23	FSM	ENSMUSG00000035901.15	ENSMUST00000080437.13	5004	23	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGGTCACTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	109559677	109492986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ENSMUST00000080449.7	chr12	+	2524	2	FSM	ENSMUSG00000059970.8	ENSMUST00000080449.7	2524	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTCTGGCGTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	76450949	76453712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_76451064_76451302
ENSMUST00000080492.7	chr17	+	383	4	FSM	ENSMUSG00000057863.7	ENSMUST00000080492.7	383	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTTGTGTATGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	56920415	56921243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_56920449_56920585_56920681_56920906_56921042_56921123
ENSMUST00000080553.9	chr7	-	2135	12	FSM	ENSMUSG00000058886.10	ENSMUST00000080553.9	2135	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTTGTCAAGCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	140907585	140877092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140907191
ENSMUST00000080666.8	chr8	+	2738	14	FSM	ENSMUSG00000036564.18	ENSMUST00000080666.8	2738	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTCGTGTTTCCTATC	NA	NA	NA	NA	NA	NA	NA	NA	96429690	96441584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_96429806_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
ENSMUST00000080834.15	chr7	-	2181	7	FSM	ENSMUSG00000098022.8	ENSMUST00000080834.15	2181	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGTTCCACTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	29772325	29755461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29771453_29771565_29772205
ENSMUST00000080856.14	chr13	-	4325	30	FSM	ENSMUSG00000042590.18	ENSMUST00000080856.14	4325	30	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	107073466	106930946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ENSMUST00000080860.13	chr10	-	1190	6	FSM	ENSMUSG00000059554.13	ENSMUST00000080860.13	1190	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTTTCTGTTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	18110744	18089423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_18089927_18092007_18092031_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ENSMUST00000080861.6	chr2	-	946	4	FSM	ENSMUSG00000062997.7	ENSMUST00000080861.6	946	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTCATGTTTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	38895636	38891591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_38891778_38894118_38894201_38894743_38894881_38895095
ENSMUST00000080884.11	chrX	+	1739	14	FSM	ENSMUSG00000025271.14	ENSMUST00000080884.11	1739	14	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	149372916	149426874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ENSMUST00000080975.6	chr10	-	2458	14	FSM	ENSMUSG00000040462.14	ENSMUST00000080975.6	2458	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCAGGCTCTGTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	126956994	126931518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_126932242_126932498_126932612_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ENSMUST00000081111.14	chr9	+	1858	14	FSM	ENSMUSG00000062867.14	ENSMUST00000081111.14	1858	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGTTCAATGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	108437484	108442783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUST00000081333.11	chr19	-	1114	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATGTCTTACACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24257969	24238816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
ENSMUST00000081435.5	chr17	+	1793	6	FSM	ENSMUSG00000035929.12	ENSMUST00000081435.5	1793	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGGTCTGCCTTACATT	NA	NA	NA	NA	NA	NA	NA	NA	35598592	35603650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35598684_35598795_35599150_35599336_35599613_35601833_35602110_35602236_35602353_35602970
ENSMUST00000081497.13	chr5	+	1025	6	FSM	ENSMUSG00000060152.15	ENSMUST00000081497.13	1025	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCCCGTGTGGTTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	115373894	115379050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_115373944_115375882_115376129_115376193_115376337_115378220_115378371_115378531_115378616_115378697
ENSMUST00000081503.13	chr8	+	1560	8	FSM	ENSMUSG00000031860.18	ENSMUST00000081503.13	1560	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGTTTTCAATACAG	NA	NA	NA	NA	NA	NA	NA	NA	70285140	70324942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_70285502_70311729_70311804_70316961_70317201_70317473_70317665_70319117_70319254_70322678_70322833_70323227_70323335_70324644
ENSMUST00000081554.13	chr5	+	1887	11	FSM	ENSMUSG00000029470.16	ENSMUST00000081554.13	1887	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTTGTCTGTGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	122845646	122867107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
ENSMUST00000081591.7	chr2	+	2111	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGGCCTTTTTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	83474778	83494966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ENSMUST00000081649.10	chr7	-	655	2	FSM	ENSMUSG00000060591.10	ENSMUST00000081649.10	655	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	140535900	140534749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_140535087_140535582
ENSMUST00000081790.15	chr19	-	5792	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTTTGATACCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	60569463	60513133	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ENSMUST00000081840.6	chr6	-	517	4	FSM	ENSMUSG00000057841.6	ENSMUST00000081840.6	517	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATGTTTTTGGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	115785708	115782465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_115782650_115783946_115784129_115784762_115784864_115785658
ENSMUST00000081869.7	chr2	-	3255	2	FSM	ENSMUSG00000059555.7	ENSMUST00000081869.7	3255	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCACCTTCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	25086898	25082977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_25085938_25086603
ENSMUST00000081940.11	chr8	-	541	4	FSM	ENSMUSG00000090137.9	ENSMUST00000081940.11	541	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGGTGTCTAGAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	70963067	70960915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_70961179_70961945_70962033_70962170_70962282_70962987
ENSMUST00000081980.7	chr11	+	1920	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATGGTTTGCCTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	59839031	59853031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_59839305_59851384
ENSMUST00000082092.5	chr11	+	345	5	FSM	ENSMUSG00000057322.13	ENSMUST00000082092.5	345	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	114559451	114563157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_114559512_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ENSMUST00000082121.9	chr5	-	1945	19	FSM	ENSMUSG00000029276.14	ENSMUST00000082121.9	1945	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTCATTATACTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	107745754	107696888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745672
ENSMUST00000082134.6	chr7	+	1109	5	FSM	ENSMUSG00000037563.16	ENSMUST00000082134.6	1109	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCTGGCCTTTATGGT	NA	NA	NA	NA	NA	NA	NA	NA	28050076	28052580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_28050277_28050416_28050519_28051601_28051699_28051787_28051836_28051918
ENSMUST00000082136.7	chr12	-	1926	4	FSM	ENSMUSG00000059436.14	ENSMUST00000082136.7	1926	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGGTAGTAGTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	77008975	76984047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_76985530_76986740_76986865_76999942_77000051_77008763
ENSMUST00000082141.12	chr18	-	2820	9	FSM	ENSMUSG00000063889.17	ENSMUST00000082141.12	2820	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGTGTGTATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	3337589	3266355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_3268130_3273421_3273579_3276693_3276730_3287903_3288093_3295039_3295183_3295321_3295417_3325360_3325479_3327493_3327592_3337379
ENSMUST00000082262.8	chr4	+	6226	23	FSM	ENSMUSG00000078517.13	ENSMUST00000082262.8	6226	23	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACTATTTGTGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	139079903	139106041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092496_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ENSMUST00000082429.8	chr9	+	1072	2	FSM	ENSMUSG00000063856.9	ENSMUST00000082429.8	1072	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTGTCCTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	108216252	108217542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108216758_108216975
ENSMUST00000084035.12	chr8	-	3985	22	FSM	ENSMUSG00000031555.16	ENSMUST00000084035.12	3985	22	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCGTCCTCTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	25506938	25439626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ENSMUST00000084116.13	chr4	+	3722	12	FSM	ENSMUSG00000028948.17	ENSMUST00000084116.13	3722	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATAATAACAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	152123783	152144481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ENSMUST00000084219.12	chr4	+	2647	10	FSM	ENSMUSG00000066037.15	ENSMUST00000084219.12	2647	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTGATTGGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	136038335	136068174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_136038401_136043671_136043796_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUST00000084319.11	chr4	+	1134	7	FSM	ENSMUSG00000006392.17	ENSMUST00000084319.11	1134	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	118266533	118272308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_118266584_118268081_118268201_118268894_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ENSMUST00000084412.6	chr7	-	1158	3	FSM	ENSMUSG00000045777.15	ENSMUST00000084412.6	1158	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCAGCCTCTGTCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	141925996	141909244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_141909852_141924594_141925048_141925898
ENSMUST00000084530.9	chr4	+	1820	4	FSM	ENSMUSG00000066152.12	ENSMUST00000084530.9	1820	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTGGTCCGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	62204685	62216648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_62204812_62210868_62210936_62214123_62214314_62215211
ENSMUST00000084563.11	chr7	+	1054	3	FSM	ENSMUSG00000106715.4	ENSMUST00000084563.11	1054	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTCTAATTGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	127160561	127164442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_127160958_127162293_127162465_127163955
ENSMUST00000084721.8	chr13	+	1222	3	FSM	ENSMUSG00000078941.10	ENSMUST00000084721.8	1222	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGTACTTTGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	100787850	100792567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_100787954_100790698_100790792_100791541
ENSMUST00000084747.6	chr4	+	4295	6	FSM	ENSMUSG00000028278.15	ENSMUST00000084747.6	4295	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGAAGTGGGGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	32983453	33022180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_32983608_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
ENSMUST00000084771.3	chr10	+	1559	7	FSM	ENSMUSG00000071072.13	ENSMUST00000084771.3	1559	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAAGATTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	127894879	127912847	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127910090_127910154_127911206_127911232_127911935
ENSMUST00000084881.5	chr9	-	1674	7	FSM	ENSMUSG00000032431.7	ENSMUST00000084881.5	1674	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTCTCCGTCCTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	114219743	114204201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_114204651_114207107_114207192_114208977_114209124_114210653_114210783_114213763_114213936_114215269_114215420_114219199
ENSMUST00000084882.9	chr12	+	1439	7	FSM	ENSMUSG00000006356.11	ENSMUST00000084882.9	1439	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTGTCGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	113103855	113109126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_113104235_113107078_113107232_113107634_113107776_113107848_113107918_113108018_113108114_113108429_113108488_113108582
ENSMUST00000084915.11	chr4	-	2884	14	FSM	ENSMUSG00000028207.19	ENSMUST00000084915.11	2884	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGATTGTCATTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	9669162	9575266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ENSMUST00000084937.11	chr7	+	2092	7	FSM	ENSMUSG00000045411.17	ENSMUST00000084937.11	2092	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	43896210	43901739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_43896248_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000084953.13	chr12	+	3365	17	FSM	ENSMUSG00000007411.17	ENSMUST00000084953.13	3365	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGCACTGTCTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	111540960	111622655	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111619823_111619869_111621703
ENSMUST00000085065.12	chr12	+	977	7	FSM	ENSMUSG00000064215.14	ENSMUST00000085065.12	977	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCATTGTTCCCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	103400517	103406498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_103400610_103401680_103401833_103402821_103402942_103403648_103403784_103403934_103403965_103405659_103405822_103406212
ENSMUST00000085245.7	chr12	+	5201	7	FSM	ENSMUSG00000048833.10	ENSMUST00000085245.7	5201	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTATGTGAGTGGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	80691012	80730111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ENSMUST00000085404.10	chr12	-	1012	4	FSM	ENSMUSG00000020956.15	ENSMUST00000085404.10	1012	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCCATGTTTTCATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	52053284	52035094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_52035639_52046385_52046657_52051661_52051732_52053157
ENSMUST00000085546.13	chr5	-	2838	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACGTCTTTGTAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	148989850	148983511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
ENSMUST00000085651.12	chr9	+	2024	8	FSM	ENSMUSG00000032336.18	ENSMUST00000085651.12	2024	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGAATAATACTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	58489574	58560161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559141
ENSMUST00000085851.12	chr7	-	1243	6	FSM	ENSMUSG00000030595.16	ENSMUST00000085851.12	1243	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTTCCTGCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	28465939	28458456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28458630_28459251_28459522_28459601_28459691_28461026_28461361_28461450_28461557_28465668
ENSMUST00000085913.11	chr1	-	6227	23	FSM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGGGCCTGGGTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	172125631	172099275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ENSMUST00000085984.11	chr5	-	1516	13	FSM	ENSMUSG00000005378.18	ENSMUST00000085984.11	1516	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCCCTGGCCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	135093520	135081810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092737_135092776_135092867_135093030_135093377
ENSMUST00000086046.10	chr5	+	2112	10	FSM	ENSMUSG00000029432.13	ENSMUST00000086046.10	2112	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGCACGATTGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	129802126	129835391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129830289_129830385_129831905_129831990_129834142
ENSMUST00000086247.6	chr5	+	712	4	FSM	ENSMUSG00000029468.18	ENSMUST00000086247.6	712	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCCAGAATTGGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	122782071	122793325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_122782262_122790789_122790959_122792223_122792293_122793041
ENSMUST00000086461.13	chr5	-	2796	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACCGTCATGCACCGAG	NA	NA	NA	NA	NA	NA	NA	NA	117527112	117516167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ENSMUST00000086519.12	chr5	+	1358	7	FSM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCCAAGCCTGGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	115697525	115701786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ENSMUST00000086535.12	chr1	+	1049	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGGTTTGAACATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	39406922	39410992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ENSMUST00000086833.13	chr5	+	1411	8	FSM	ENSMUSG00000029304.15	ENSMUST00000086833.13	1411	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	58921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	104582983	104588914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_104583063_104584240_104584309_104584406_104584443_104584766_104584770_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUST00000086844.10	chr11	-	2471	10	FSM	ENSMUSG00000000782.17	ENSMUST00000086844.10	2471	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTTTTGTATTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	52173398	52143197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173380
ENSMUST00000086851.2	chr1	-	1335	4	FSM	ENSMUSG00000067071.9	ENSMUST00000086851.2	1335	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATGTGTCCAATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	91340944	91339204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_91340205_91340442_91340525_91340614_91340702_91340778
ENSMUST00000086869.6	chr17	+	1660	8	FSM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGTGTTGGAGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	56266173	56275285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
ENSMUST00000086880.11	chrX	+	2024	5	FSM	ENSMUSG00000049047.12	ENSMUST00000086880.11	2024	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTAGTCTGTCTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	133657355	133660855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_133657480_133657984_133658092_133658480_133658543_133658825_133658896_133659194
ENSMUST00000087052.11	chr4	-	1292	8	FSM	ENSMUSG00000028218.20	ENSMUST00000087052.11	1292	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTACATAGTCTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	12171995	12153723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168228_12168325_12168964_12169034_12170983_12171219_12171697
ENSMUST00000087225.6	chr1	+	2859	9	FSM	ENSMUSG00000026179.15	ENSMUST00000087225.6	2859	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGTCTGAGCTCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	74371768	74392845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_74371951_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
ENSMUST00000087328.4	chr17	-	2967	1	FSM	ENSMUSG00000091971.4	ENSMUST00000087328.4	2967	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCCGGGGCTGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	35191132	35188165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_35188200_35191100
ENSMUST00000087342.13	chr17	-	392	4	FSM	ENSMUSG00000067288.14	ENSMUST00000087342.13	392	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTCCAGCAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	34043536	34042009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34042091_34042170_34042305_34043272_34043321_34043407
ENSMUST00000087351.9	chr15	+	1737	10	FSM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	103148880	103153382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ENSMUST00000087511.10	chr5	+	1291	5	FSM	ENSMUSG00000067365.12	ENSMUST00000087511.10	1291	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTAATGCAAATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	38417528	38426978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426402
ENSMUST00000087514.9	chr5	+	1563	9	FSM	ENSMUSG00000067367.10	ENSMUST00000087514.9	1563	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGATAACAAATTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	38377813	38391650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_38377980_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ENSMUST00000087865.4	chr6	-	1684	9	FSM	ENSMUSG00000030189.16	ENSMUST00000087865.4	1684	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGTAACTAGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	131365439	131341817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ENSMUST00000088200.13	chr15	+	1376	5	FSM	ENSMUSG00000044217.18	ENSMUST00000088200.13	1376	5	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATAGCCCTGTTTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	99488729	99492489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_99488846_99488978_99489516_99490542_99490708_99491126_99491211_99492015
ENSMUST00000088248.13	chr2	+	967	6	FSM	ENSMUSG00000001403.14	ENSMUST00000088248.13	967	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	164611817	164614827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_164612001_164612286_164612315_164613212_164613300_164613773_164613979_164614086_164614147_164614423
ENSMUST00000088287.10	chr1	+	4322	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTGTGTGTGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	33758975	33781645	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ENSMUST00000088291.5	chr2	+	4098	3	FSM	ENSMUSG00000018209.16	ENSMUST00000088291.5	4098	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCCCCTTTCTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	163952120	163997444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_163952209_163959888_163960047_163993592
ENSMUST00000088464.12	chr17	-	2504	20	FSM	ENSMUSG00000052752.16	ENSMUST00000088464.12	2504	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	24738182	24727823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104
ENSMUST00000088512.13	chr17	+	1816	8	FSM	ENSMUSG00000034681.18	ENSMUST00000088512.13	1816	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGTTTTACTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	24633636	24644875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_24633709_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUST00000088610.11	chr2	+	569	3	FSM	ENSMUSG00000067847.14	ENSMUST00000088610.11	569	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTATTTTTACCTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	155985958	155987717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_155986201_155986378_155986510_155987521
ENSMUST00000088811.7	chr17	+	3800	5	FSM	ENSMUSG00000067942.7	ENSMUST00000088811.7	3800	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTCTTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	21229202	21249123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_21229249_21231937_21232035_21240333_21240461_21240967_21241097_21245722
ENSMUST00000088874.10	chrX	+	1728	5	FSM	ENSMUSG00000015217.12	ENSMUST00000088874.10	1728	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCACCAGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	70599595	70604282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_70599844_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ENSMUST00000089024.13	chr17	+	1902	11	FSM	ENSMUSG00000068039.14	ENSMUST00000089024.13	1902	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	13135215	13143443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_13135517_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUST00000089052.11	chr7	-	2344	9	FSM	ENSMUSG00000070426.13	ENSMUST00000089052.11	2344	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGGACACGCATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	101714676	101668358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714473
ENSMUST00000089059.9	chr2	+	1743	13	FSM	ENSMUSG00000019188.17	ENSMUST00000089059.9	1743	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGAGCTCTCAGCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	152511407	152546956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152545914_152546115_152546541
ENSMUST00000089157.11	chr15	-	1202	6	FSM	ENSMUSG00000068101.12	ENSMUST00000089157.11	1202	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	82128949	82117979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ENSMUST00000089217.11	chrX	+	4044	26	FSM	ENSMUSG00000001924.16	ENSMUST00000089217.11	4044	26	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCTAAGTTCGCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	20524564	20549418	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ENSMUST00000089377.6	chr15	+	800	4	FSM	ENSMUSG00000068220.7	ENSMUST00000089377.6	800	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	82062	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATGATGACACATACTT	NA	NA	NA	NA	NA	NA	NA	NA	78810924	78814665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_78811005_78812169_78812250_78813832_78814005_78814197
ENSMUST00000089402.10	chrX	-	1839	13	FSM	ENSMUSG00000031169.14	ENSMUST00000089402.10	1839	13	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTCGGTTTTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	8072740	8060088	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
ENSMUST00000089452.6	chr15	-	1527	3	FSM	ENSMUSG00000057346.13	ENSMUST00000089452.6	1527	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTCTGACTCGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	77295234	77287988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_77289283_77289780_77289907_77295127
ENSMUST00000089506.12	chr2	+	1432	4	FSM	ENSMUSG00000068264.12	ENSMUST00000089506.12	1432	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	131052359	131055434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_131052602_131053182_131053394_131054366_131054657_131054745
ENSMUST00000089549.8	chr14	-	916	5	FSM	ENSMUSG00000022156.9	ENSMUST00000089549.8	916	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTGCATAGAGCTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	56358082	56355082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_56355327_56355707_56355969_56356154_56356291_56356754_56356906_56357958
ENSMUST00000089558.7	chr6	+	1055	4	FSM	ENSMUSG00000057278.9	ENSMUST00000089558.7	1055	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCAGCAGGCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	86348285	86356310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_86348597_86352658_86352682_86353476_86353602_86355714
ENSMUST00000089680.10	chr15	-	973	8	FSM	ENSMUSG00000055762.17	ENSMUST00000089680.10	973	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCGCCTCTTGTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	75781168	75767338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75769074_75769132_75772980_75773102_75781093
ENSMUST00000089950.11	chr3	-	1381	9	FSM	ENSMUSG00000038975.15	ENSMUST00000089950.11	1381	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	153618646	153612925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ENSMUST00000090002.10	chr6	-	1662	12	FSM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	51446825	51438103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUST00000090023.13	chr16	+	2080	11	FSM	ENSMUSG00000022841.16	ENSMUST00000090023.13	2080	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTGGGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	20354227	20362806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ENSMUST00000090046.12	chr2	-	2897	20	FSM	ENSMUSG00000033808.17	ENSMUST00000090046.12	2897	20	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	120234570	120185792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202114_120204968_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ENSMUST00000090476.10	chr3	-	809	6	FSM	ENSMUSG00000038543.14	ENSMUST00000090476.10	809	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCCTACTTCTTAATGA	NA	NA	NA	NA	NA	NA	NA	NA	95799317	95791265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95791550_95792281_95792384_95795452_95795609_95796168_95796228_95797034_95797122_95799196
ENSMUST00000090480.6	chr16	-	1150	10	FSM	ENSMUSG00000039637.16	ENSMUST00000090480.6	1150	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGAAGAGAAATGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	4497641	4470426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_4470626_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ENSMUST00000090546.6	chr3	-	2864	3	FSM	ENSMUSG00000068732.6	ENSMUST00000090546.6	2864	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTGCTTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	108469782	108463740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_108466277_108467502_108467635_108469586
ENSMUST00000090553.12	chr3	-	3570	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAAGGTGTGGTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	108352514	108332180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ENSMUST00000090686.11	chr6	-	1547	10	FSM	ENSMUSG00000004631.16	ENSMUST00000090686.11	1547	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTAAACTTTAAAATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	4747116	4674383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_4674633_4678066_4678111_4689578_4689768_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4719373_4719497_4746979
ENSMUST00000090726.6	chr2	+	2583	13	FSM	ENSMUSG00000027074.15	ENSMUST00000090726.6	2583	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGCTTCTACCTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	84767007	84788853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_84767194_84767866_84768214_84768566_84768697_84771324_84771372_84774585_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780764_84780885_84785774_84785962_84786615_84786731_84788029
ENSMUST00000090756.11	chr2	-	1661	14	FSM	ENSMUSG00000059173.20	ENSMUST00000090756.11	1661	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGATTTTGTCATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	79738743	79689368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_79689577_79695381_79695570_79695965_79696087_79698573_79698656_79705346_79705468_79705572_79705675_79708466_79708593_79718184_79718286_79727408_79727550_79728409_79728527_79732155_79732223_79736333_79736517_79737633_79737683_79738688
ENSMUST00000090804.12	chr3	+	4325	21	FSM	ENSMUSG00000015522.19	ENSMUST00000090804.12	4325	21	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	95341700	95404551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ENSMUST00000091039.5	chr2	-	2738	20	FSM	ENSMUSG00000038831.17	ENSMUST00000091039.5	2738	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCGTGTCTTGTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	33261490	33026984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33045299_33045352_33047783_33047942_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
ENSMUST00000091087.13	chr9	+	3450	20	FSM	ENSMUSG00000033335.18	ENSMUST00000091087.13	3450	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTACTGGTGGCTACGTG	NA	NA	NA	NA	NA	NA	NA	NA	21336266	21418422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21390194_21390334_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ENSMUST00000091132.13	chr2	+	1353	12	FSM	ENSMUSG00000079484.13	ENSMUST00000091132.13	1353	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATGTACGGGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	30156540	30172161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_30156638_30156874_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
ENSMUST00000091325.10	chr3	+	3391	19	FSM	ENSMUSG00000027550.15	ENSMUST00000091325.10	3391	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTGATAATTGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	14598883	14631163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605127_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ENSMUST00000091328.4	chr7	+	1716	8	FSM	ENSMUSG00000063065.14	ENSMUST00000091328.4	1716	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCTGTCTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	126359768	126364991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126360086_126362206_126362397_126362569_126362687_126362912_126363028_126363405_126363538_126363705_126363816_126363894_126364050_126364411
ENSMUST00000091358.11	chr4	+	3527	9	FSM	ENSMUSG00000028560.12	ENSMUST00000091358.11	3527	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	98812115	98823780	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ENSMUST00000091569.7	chr13	-	1432	8	FSM	ENSMUSG00000050345.10	ENSMUST00000091569.7	1432	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACTTCTTTTTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	61012289	60990425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_60990791_60992122_60992241_60992893_60993057_61000913_61001139_61001329_61001477_61001569_61001693_61002626_61002764_61012135
ENSMUST00000091609.11	chr13	-	2186	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAAAGACTGTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	54759157	54740213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
ENSMUST00000091641.13	chr13	+	1785	9	FSM	ENSMUSG00000021431.16	ENSMUST00000091641.13	1785	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGAAGTGCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	38388920	38411641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ENSMUST00000091967.13	chr18	+	2091	15	FSM	ENSMUSG00000024381.17	ENSMUST00000091967.13	2091	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGAGGCGTGTCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	32510297	32568790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32564723_32564796_32565035_32565147_32565376_32565479_32568187
ENSMUST00000092143.12	chr10	-	3843	7	FSM	ENSMUSG00000051236.14	ENSMUST00000092143.12	3843	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCTCTGCTTCCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	120735006	120617000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_120620144_120627306_120627405_120661012_120661042_120685880_120685959_120687888_120687998_120706939_120707057_120734737
ENSMUST00000092295.10	chr10	-	1662	7	FSM	ENSMUSG00000035478.15	ENSMUST00000092295.10	1662	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	80235384	80228372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
ENSMUST00000092425.11	chr11	+	737	6	FSM	ENSMUSG00000017404.13	ENSMUST00000092425.11	737	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGCTGCTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	97917535	97921318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_97917589_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ENSMUST00000092500.11	chr11	+	2816	9	FSM	ENSMUSG00000020610.18	ENSMUST00000092500.11	2816	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCATTTCGCGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	109316771	109328974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_109316857_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ENSMUST00000092576.11	chr2	+	3887	15	FSM	ENSMUSG00000027646.16	ENSMUST00000092576.11	3887	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	157266212	157313758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_157266335_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157300762_157300781_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ENSMUST00000092678.10	chr10	+	5307	12	FSM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	20188214	20218247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ENSMUST00000092689.9	chr11	-	1344	8	FSM	ENSMUSG00000017176.18	ENSMUST00000092689.9	1344	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGCACGCGTCTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	100331846	100320181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331753
ENSMUST00000092794.12	chr11	-	1855	14	FSM	ENSMUSG00000069769.14	ENSMUST00000092794.12	1855	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTACAAGGTTTTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	88608927	88234714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_88235487_88237878_88237952_88239609_88239819_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88480880_88480974_88603263_88603306_88607335_88607421_88608115_88608198_88608530_88608572_88608854
ENSMUST00000092857.13	chr11	+	3687	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACACTTTTCAAAGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	80099909	80158312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ENSMUST00000092955.11	chr19	+	830	6	FSM	ENSMUSG00000069833.14	ENSMUST00000092955.11	830	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGAGGTGGCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	8966658	9054078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9053939
ENSMUST00000093061.7	chr11	+	2251	6	FSM	ENSMUSG00000020455.17	ENSMUST00000093061.7	2251	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGCTTATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	58868941	58882283	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_58869471_58872066_58872163_58872818_58873050_58879550_58879574_58879654_58879756_58881012
ENSMUST00000093109.11	chr11	-	962	6	FSM	ENSMUSG00000020388.13	ENSMUST00000093109.11	962	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTGCTTGCTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	53959758	53945773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_53946066_53946615_53946780_53946968_53947151_53950763_53950843_53954460_53954613_53959665
ENSMUST00000093140.5	chr11	+	962	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAAACCTTCATCGTA	NA	NA	NA	NA	NA	NA	NA	NA	120489357	120496602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120489697_120490067_120490195_120496106
ENSMUST00000093153.2	chr11	-	2403	3	FSM	ENSMUSG00000069893.11	ENSMUST00000093153.2	2403	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGCGTCCTTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	48870225	48856643	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_48858803_48869865_48870015_48870130
ENSMUST00000093169.3	chr11	-	958	1	FSM	ENSMUSG00000069899.4	ENSMUST00000093169.3	958	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGACAGAGAGAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	45943138	45942180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_45942200_45943100
ENSMUST00000093191.3	chr11	-	2505	12	FSM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTGTATTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	34724468	34700016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
ENSMUST00000093195.7	chr8	+	1265	3	FSM	ENSMUSG00000005699.17	ENSMUST00000093195.7	1265	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATGTGGTCCTTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	106428278	106430124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_106428436_106428805_106429029_106429239
ENSMUST00000093196.11	chr5	-	1092	5	FSM	ENSMUSG00000066551.13	ENSMUST00000093196.11	1092	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTGTGTAAGATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	148988426	148985454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148988088
ENSMUST00000093517.7	chr8	+	1520	7	FSM	ENSMUSG00000031628.10	ENSMUST00000093517.7	1520	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTTATTACTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	47070429	47091752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_47070532_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
ENSMUST00000093907.11	chr11	+	3616	12	FSM	ENSMUSG00000059248.14	ENSMUST00000093907.11	3616	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCTTTGGCAAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	117090486	117253151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_117090600_117109700_117109758_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUST00000093943.10	chr11	+	1251	6	FSM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTGTCTTTTGGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	96679984	96699466	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96699009
ENSMUST00000094014.10	chr11	+	2130	5	FSM	ENSMUSG00000069808.14	ENSMUST00000094014.10	2130	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTATGTGCCCTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	76092840	76100242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_76093082_76093377_76093462_76096079_76096282_76097953_76098050_76098735
ENSMUST00000094028.10	chr3	-	3193	10	FSM	ENSMUSG00000070372.12	ENSMUST00000094028.10	3193	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCTTCCTGAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	104771821	104730094	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ENSMUST00000094055.10	chr11	+	1788	4	FSM	ENSMUSG00000040938.17	ENSMUST00000094055.10	1788	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTGAGAGTTCCATTAG	NA	NA	NA	NA	NA	NA	NA	NA	70104940	70107240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70105539_70105780_70105925_70106109_70106878_70106962
ENSMUST00000094065.5	chr11	+	492	4	FSM	ENSMUSG00000070394.11	ENSMUST00000094065.5	492	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCTTTATTCATC	NA	NA	NA	NA	NA	NA	NA	NA	69729349	69730444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69729476_69729745_69729778_69730013_69730095_69730191
ENSMUST00000094081.5	chr11	+	1263	4	FSM	ENSMUSG00000020895.15	ENSMUST00000094081.5	1263	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAAATAGATATTATTC	NA	NA	NA	NA	NA	NA	NA	NA	68961636	68964119	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248
ENSMUST00000094324.8	chr9	+	3632	15	FSM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	109704646	109722963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ENSMUST00000094365.11	chr3	-	1180	7	FSM	ENSMUSG00000027556.16	ENSMUST00000094365.11	1180	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTTTATTGTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	14843519	14831276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_14831713_14832463_14832620_14835230_14835294_14835867_14835964_14841277_14841397_14842788_14842987_14843407
ENSMUST00000094434.13	chr7	-	968	4	FSM	ENSMUSG00000050708.17	ENSMUST00000094434.13	968	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	75765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	NA	NA	NA	NA	NA	NA	NA	45109308	45107367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_45107708_45107958_45108085_45108507_45108655_45108953
ENSMUST00000094657.10	chr4	+	1401	9	FSM	ENSMUSG00000054405.15	ENSMUST00000094657.10	1401	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	132262860	132281053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ENSMUST00000094693.11	chr12	+	1527	8	FSM	ENSMUSG00000021134.18	ENSMUST00000094693.11	1527	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	80992277	80997281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ENSMUST00000094835.9	chr2	-	1498	8	FSM	ENSMUSG00000040591.19	ENSMUST00000094835.9	1498	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATGAGTCTAAAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	91275025	91108588	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093_91135179_91214073_91214205_91274913
ENSMUST00000094869.12	chr5	+	477	4	FSM	ENSMUSG00000070858.13	ENSMUST00000094869.12	477	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTGTATTTTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	34140776	34142357	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_34140909_34141100_34141241_34141395_34141485_34142241
ENSMUST00000095044.10	chr2	+	2394	7	FSM	ENSMUSG00000026811.19	ENSMUST00000095044.10	2394	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTCTGTGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	32497037	32510818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32497124_32498053_32498109_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
ENSMUST00000095074.4	chr4	+	3550	3	FSM	ENSMUSG00000037348.16	ENSMUST00000095074.4	3550	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCTTGATTCGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	134224314	134237546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_134224348_134227910_134227995_134234113
ENSMUST00000095128.10	chr4	-	659	4	FSM	ENSMUSG00000071014.11	ENSMUST00000095128.10	659	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTAGCTACTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	40279421	40270590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_40270848_40272809_40272855_40277652_40277746_40279157
ENSMUST00000095172.6	chr8	+	2276	21	FSM	ENSMUSG00000034390.17	ENSMUST00000095172.6	2276	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	118075908	118186169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_118076115_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
ENSMUST00000095214.10	chr8	+	1731	6	FSM	ENSMUSG00000036810.17	ENSMUST00000095214.10	1731	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTAGTGGTTAGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	88845396	88861734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88860415
ENSMUST00000095220.4	chr8	+	1907	10	FSM	ENSMUSG00000008167.15	ENSMUST00000095220.4	1907	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGTGAGCTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	85786683	85793750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
ENSMUST00000095228.5	chr8	+	2265	5	FSM	ENSMUSG00000079003.4	ENSMUST00000095228.5	2265	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTTCATTTTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	84724129	84727038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_84725195_84725571_84725870_84725952_84726050_84726144_84726257_84726345
ENSMUST00000095273.7	chr8	+	1161	5	FSM	ENSMUSG00000071078.7	ENSMUST00000095273.7	1161	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAAACACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	70583996	70586389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_70584250_70584567_70584659_70585061_70585168_70585236_70585305_70585746
ENSMUST00000095347.13	chr17	-	2617	12	FSM	ENSMUSG00000024335.21	ENSMUST00000095347.13	2617	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGTATGGGTGGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	34337463	34331336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337429
ENSMUST00000095349.6	chr8	-	2808	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAGTCAGCTTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	34131995	34109613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
ENSMUST00000095410.8	chr12	+	2384	3	FSM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTTGTAGAACTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	110704425	110761462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_110704712_110745729_110745913_110759547
ENSMUST00000095579.11	chr17	-	1450	14	FSM	ENSMUSG00000041319.15	ENSMUST00000095579.11	1450	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	23892856	23887591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
ENSMUST00000095625.11	chr14	+	1195	4	FSM	ENSMUSG00000034795.15	ENSMUST00000095625.11	1195	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTCCACATTGAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	77274221	77349644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_77274412_77305299_77305394_77306276_77306390_77348846
ENSMUST00000095725.11	chr10	+	2127	8	FSM	ENSMUSG00000038240.14	ENSMUST00000095725.11	2127	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAAGTGTCTGCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	43097481	43316598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_43098057_43174794_43174930_43221523_43221723_43248130_43248206_43269866_43270041_43271556_43271689_43289510_43289544_43315794
ENSMUST00000095779.11	chr10	-	919	5	FSM	ENSMUSG00000039166.17	ENSMUST00000095779.11	919	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTTGGTTTGTGGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	25175005	25155226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_25155703_25159790_25159940_25165496_25165629_25174032_25174127_25174937
ENSMUST00000095794.4	chr10	-	1195	7	FSM	ENSMUSG00000071359.14	ENSMUST00000095794.4	1195	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCTCTCTTCATATC	NA	NA	NA	NA	NA	NA	NA	NA	22607837	22581279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607681
ENSMUST00000095795.5	chr10	+	1271	7	FSM	ENSMUSG00000078452.11	ENSMUST00000095795.5	1271	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	22237792	22250038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_22237809_22238169_22238261_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
ENSMUST00000096014.5	chr19	-	362	4	FSM	ENSMUSG00000071528.5	ENSMUST00000096014.5	362	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1771	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGGTTGTCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	47079082	47071906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_47072009_47074393_47074487_47074572_47074669_47079011
ENSMUST00000096020.7	chr10	+	468	1	FSM	ENSMUSG00000071532.7	ENSMUST00000096020.7	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4916	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGAGTCCAGATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	14398821	14399289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_14398800_14399300
ENSMUST00000096030.7	chr6	-	2276	5	FSM	ENSMUSG00000071537.7	ENSMUST00000096030.7	2276	5	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCTCTGTCCCAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	38614168	38603594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_38604661_38605019_38605124_38606698_38606845_38607215_38607318_38613310
ENSMUST00000096109.11	chr16	-	993	6	FSM	ENSMUSG00000023791.19	ENSMUST00000096109.11	993	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTAACTGGTTAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	31918556	31903241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918287
ENSMUST00000096199.5	chr16	-	1136	7	FSM	ENSMUSG00000022822.17	ENSMUST00000096199.5	1136	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTATTTACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	20245104	20219510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_20219822_20221009_20221085_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ENSMUST00000096239.7	chr19	+	2753	9	FSM	ENSMUSG00000071645.7	ENSMUST00000096239.7	2753	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTTCTTTTGCATAC	NA	NA	NA	NA	NA	NA	NA	NA	8931210	8943574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
ENSMUST00000096243.7	chr19	+	1603	5	FSM	ENSMUSG00000071649.7	ENSMUST00000096243.7	1603	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTTCATGGTTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	8897737	8904600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_8898013_8899169_8899345_8902901_8903263_8903445_8903737_8904099
ENSMUST00000096253.7	chr19	-	821	2	FSM	ENSMUSG00000071654.7	ENSMUST00000096253.7	821	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTGGAAAGACCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	8858287	8857377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_8857981_8858069
ENSMUST00000096257.3	chr19	+	2583	2	FSM	ENSMUSG00000071656.8	ENSMUST00000096257.3	2583	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAATATACAGACTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	8828148	8831273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_8828477_8829018
ENSMUST00000096261.5	chr19	-	890	8	FSM	ENSMUSG00000071662.5	ENSMUST00000096261.5	890	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTGGTTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	8775941	8770490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587_8775698_8775822
ENSMUST00000096639.12	chr7	-	2249	9	FSM	ENSMUSG00000070426.13	ENSMUST00000096639.12	2249	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCCTTTTTTTTTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	101714365	101668343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714272
ENSMUST00000097193.3	chr1	+	787	3	FSM	ENSMUSG00000058267.14	ENSMUST00000097193.3	787	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAAAGTATGGTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	160022872	160027382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_160023116_160024515_160024675_160026997
ENSMUST00000097271.4	chr11	-	2082	2	FSM	ENSMUSG00000046879.8	ENSMUST00000097271.4	2082	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCCTTTGTATTATCT	NA	NA	NA	NA	NA	NA	NA	NA	48762247	48756075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_48757831_48761920
ENSMUST00000097317.10	chr17	-	1931	13	FSM	ENSMUSG00000023942.16	ENSMUST00000097317.10	1931	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	45906829	45896128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906803
ENSMUST00000097395.5	chr17	+	1684	12	FSM	ENSMUSG00000116895.2	ENSMUST00000097395.5	1684	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTAGGTGGGACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	15230437	15242711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15239703_15239734_15240527_15240597_15242176
ENSMUST00000097420.7	chr17	-	1793	9	FSM	ENSMUSG00000095687.3	ENSMUST00000097420.7	1793	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGCTAGTGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	8366929	8346907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
ENSMUST00000097467.8	chr1	+	1606	5	FSM	ENSMUSG00000013973.13	ENSMUST00000097467.8	1606	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGGGACTCTGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	171158993	171169184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_171159167_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUST00000097536.6	chr1	+	1737	3	FSM	ENSMUSG00000008475.14	ENSMUST00000097536.6	1737	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGTAACTCTCCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	152642292	152651348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_152642619_152644611_152644685_152650010
ENSMUST00000097642.4	chr1	-	438	3	FSM	ENSMUSG00000073616.11	ENSMUST00000097642.4	438	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGCTTTTAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	92569707	92564866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_92565126_92567408_92567482_92569601
ENSMUST00000097646.5	chr18	+	1065	5	FSM	ENSMUSG00000024273.9	ENSMUST00000097646.5	1065	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAATGGTAGTATTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	24603925	24610855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_24604038_24604118_24604142_24606006_24606207_24608581_24608782_24610325
ENSMUST00000097670.10	chr18	-	2088	10	FSM	ENSMUSG00000024293.17	ENSMUST00000097670.10	2088	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTACTTGATACAAT	NA	NA	NA	NA	NA	NA	NA	NA	10610129	10566610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10596338_10596442_10610025
ENSMUST00000097737.5	chr4	-	1243	8	FSM	ENSMUSG00000051557.16	ENSMUST00000097737.5	1243	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	NA	NA	NA	NA	NA	NA	NA	NA	155976238	155973318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_155973626_155973890_155974054_155974125_155974181_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
ENSMUST00000097747.9	chr4	+	1479	3	FSM	ENSMUSG00000073684.14	ENSMUST00000097747.9	1479	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTTTCCTTCATAG	NA	NA	NA	NA	NA	NA	NA	NA	155334459	155341141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155335108_155335212_155335494_155340591
ENSMUST00000097921.10	chr4	-	2471	3	FSM	ENSMUSG00000028551.15	ENSMUST00000097921.10	2471	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTTTCCTGTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	109524386	109518072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_109518824_109522214_109522355_109522806
ENSMUST00000098104.10	chr4	-	2583	7	FSM	ENSMUSG00000028459.12	ENSMUST00000098104.10	2583	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	43454627	43446461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_43448037_43448259_43448416_43449451_43449529_43450069_43450222_43452306_43452640_43454241_43454350_43454445
ENSMUST00000098300.6	chr7	+	2039	13	FSM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCACATTCACTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	97020812	97041392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUST00000098464.6	chr8	+	1804	3	FSM	ENSMUSG00000054400.17	ENSMUST00000098464.6	1804	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAAAAAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	104977561	104991570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_104977728_104983916_104984076_104990091
ENSMUST00000098500.5	chr9	+	3481	2	FSM	ENSMUSG00000035274.14	ENSMUST00000098500.5	3481	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTCAGGTTATGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	85724917	85729093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_85725009_85725703
ENSMUST00000098537.4	chr9	+	875	7	FSM	ENSMUSG00000074183.4	ENSMUST00000098537.4	875	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTCATAAGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	78137937	78149966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_78138013_78139499_78139609_78142365_78142418_78143211_78143345_78146766_78146909_78148808_78148941_78149734
ENSMUST00000098571.5	chr8	+	721	2	FSM	ENSMUSG00000074203.5	ENSMUST00000098571.5	721	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTGGTGGCTCACATCT	NA	NA	NA	NA	NA	NA	NA	NA	85449635	85453473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85449901_85453017
ENSMUST00000098613.9	chr9	-	2797	14	FSM	ENSMUSG00000032376.13	ENSMUST00000098613.9	2797	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACACTAACTTGAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	66500318	66424508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
ENSMUST00000098751.10	chr3	+	929	3	FSM	ENSMUSG00000056260.16	ENSMUST00000098751.10	929	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCCACTGGATGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	106592302	106643220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_106592450_106641673_106641956_106642720
ENSMUST00000098782.4	chr9	-	1786	8	FSM	ENSMUSG00000060594.7	ENSMUST00000098782.4	1786	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTCTGTGTCTACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	50988394	50968079	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_50968957_50970756_50970857_50973482_50973567_50974536_50974573_50979338_50979497_50985147_50985446_50987621_50987646_50988185
ENSMUST00000098862.9	chr17	-	796	4	FSM	ENSMUSG00000024121.14	ENSMUST00000098862.9	796	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTAGAGTGCTCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24388651	24383126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24383583_24383672_24383857_24388179_24388261_24388576
ENSMUST00000098867.4	chr3	-	784	2	FSM	ENSMUSG00000093424.4	ENSMUST00000098867.4	784	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	95222428	95214982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95215452_95222113
ENSMUST00000098956.3	chr3	-	471	4	FSM	ENSMUSG00000074486.3	ENSMUST00000098956.3	471	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGGGCTGGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	88286006	88285042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_88285310_88285515_88285574_88285716_88285750_88285893
ENSMUST00000098994.7	chr9	+	583	4	FSM	ENSMUSG00000048758.15	ENSMUST00000098994.7	583	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGATGACCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	106306736	106308707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_106306776_106307174_106307214_106307506_106307572_106308267
ENSMUST00000099046.4	chr9	+	681	5	FSM	ENSMUSG00000095186.2	ENSMUST00000099046.4	681	5	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTCAAAGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3023546	3025218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_3023613_3023616_3023945_3024411_3024567_3024879_3024887_3025093
ENSMUST00000099056.4	chr9	+	669	3	FSM	ENSMUSG00000095891.8	ENSMUST00000099056.4	669	3	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTCCATGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3032084	3032822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_3032151_3032154_3032635_3032699
ENSMUST00000099086.4	chr3	+	453	2	FSM	ENSMUSG00000027694.10	ENSMUST00000099086.4	453	2	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	1799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCAAGGCCCCGGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	60784445	60785008	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_60784476_60784585
ENSMUST00000099087.8	chr3	+	5655	10	FSM	ENSMUSG00000027763.14	ENSMUST00000099087.8	5655	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGCCTGAGATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	60408599	60537171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_60408845_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60523040_60523195_60528843_60528880_60529566_60529662_60532544_60532620_60533800
ENSMUST00000099106.10	chr3	+	603	5	FSM	ENSMUSG00000074604.10	ENSMUST00000099106.10	603	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGCTGTGGCTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	51568599	51590096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_51568728_51571931_51572032_51584985_51585057_51589217_51589300_51589874
ENSMUST00000099157.4	chr10	-	2311	6	FSM	ENSMUSG00000025402.13	ENSMUST00000099157.4	2311	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGGCCCCCTTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	127502501	127496787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_127497649_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
ENSMUST00000099173.11	chr2	-	2542	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATTGCTTTTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	154734855	154713329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ENSMUST00000099272.3	chr5	+	1067	6	FSM	ENSMUSG00000041453.13	ENSMUST00000099272.3	1067	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	146770011	146772796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ENSMUST00000099304.4	chr2	-	2127	13	FSM	ENSMUSG00000039033.12	ENSMUST00000099304.4	2127	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGTGTGACTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	139908705	139675399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_139676368_139699621_139699696_139725691_139725803_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
ENSMUST00000099353.6	chr19	+	1657	4	FSM	ENSMUSG00000025066.11	ENSMUST00000099353.6	1657	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCATATCCTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	47720120	47724027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_47720261_47721068_47721428_47721957_47722351_47723262
ENSMUST00000099358.5	chr13	+	2242	9	FSM	ENSMUSG00000064138.15	ENSMUST00000099358.5	2242	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTACTTGAAATTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	77856812	78312900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
ENSMUST00000099412.3	chr13	+	1652	3	FSM	ENSMUSG00000074826.11	ENSMUST00000099412.3	1652	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTATGTGTGTACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	67053478	67057230	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_67053686_67055214_67055374_67055944
ENSMUST00000099431.6	chr14	-	468	1	FSM	ENSMUSG00000063556.6	ENSMUST00000099431.6	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4448	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGAGTCCAGATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	77489754	77489286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_77489300_77489800
ENSMUST00000099441.6	chr13	-	2303	12	FSM	ENSMUSG00000033114.12	ENSMUST00000099441.6	2303	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTATGGTTTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	64277169	64244121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64268408_64268496_64270132_64270167_64276999
ENSMUST00000099489.9	chr2	+	1632	10	FSM	ENSMUSG00000023572.17	ENSMUST00000099489.9	1632	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTCCTCTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	120838928	120847385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_120839259_120839523_120839604_120840307_120840390_120841914_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
ENSMUST00000099548.10	chr16	+	1611	8	FSM	ENSMUSG00000039903.19	ENSMUST00000099548.10	1611	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTACATTAATAATTC	NA	NA	NA	NA	NA	NA	NA	NA	90623633	90701586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_90623864_90663142_90663340_90666453_90666578_90672926_90673080_90687417_90687562_90691465_90691544_90694251_90694342_90700991
ENSMUST00000099582.4	chr13	+	962	6	FSM	ENSMUSG00000021420.14	ENSMUST00000099582.4	962	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAACTGGAGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	36301840	36721483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_36301989_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ENSMUST00000099696.8	chr2	-	1657	9	FSM	ENSMUSG00000027215.14	ENSMUST00000099696.8	1657	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTCTGAAGAGGCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	93292756	93249455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475_93260601_93264205_93264279_93267732_93267816_93292674
ENSMUST00000099709.10	chr2	-	3512	31	FSM	ENSMUSG00000040479.13	ENSMUST00000099709.10	3512	31	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTTCTTTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	91806209	91763168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91805911
ENSMUST00000099805.3	chr13	-	857	5	FSM	ENSMUSG00000056457.7	ENSMUST00000099805.3	857	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAATGGAGAATTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	12814968	12805704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_12805997_12806880_12807064_12808176_12808285_12811719_12811896_12814870
ENSMUST00000099820.10	chr13	-	2736	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099820.10	2736	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGAATGAATACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	12476384	12454304	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476121
ENSMUST00000099955.4	chr19	-	1197	2	FSM	ENSMUSG00000024939.7	ENSMUST00000099955.4	1197	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	5779679	5778114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5778897_5779264
ENSMUST00000099988.3	chr19	-	561	1	FSM	ENSMUSG00000075268.3	ENSMUST00000099988.3	561	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	390	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCTGCACAGGGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	16244985	16244424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_16244400_16245000
ENSMUST00000100015.6	chr2	-	905	8	FSM	ENSMUSG00000027108.16	ENSMUST00000100015.6	905	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGTGTTTTGTTCAATG	NA	NA	NA	NA	NA	NA	NA	NA	73044677	72967870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_72968000_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
ENSMUST00000100164.5	chr15	+	1983	2	FSM	ENSMUSG00000075394.5	ENSMUST00000100164.5	1983	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAATGTCTGATGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	102942820	102945278	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102943588_102944062
ENSMUST00000100171.3	chr2	+	2613	8	FSM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGGTGTGTCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34662106	34666543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
ENSMUST00000100194.10	chr2	+	4373	27	FSM	ENSMUSG00000002546.18	ENSMUST00000100194.10	4373	27	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGGGCCTAGGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	32178324	32197924	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32178409_32182104_32182228_32183326_32183408_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ENSMUST00000100215.11	chr2	-	1749	12	FSM	ENSMUSG00000026860.17	ENSMUST00000100215.11	1749	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	30249252	30234820	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_30235440_30235710_30235952_30236070_30236086_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUST00000100483.3	chr5	-	1073	4	FSM	ENSMUSG00000029610.14	ENSMUST00000100483.3	1073	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	143846665	143839521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846518
ENSMUST00000100487.6	chr5	+	4325	15	FSM	ENSMUSG00000029613.16	ENSMUST00000100487.6	4325	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGACACTGTTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	143803542	143841069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ENSMUST00000100497.11	chr5	-	1920	6	FSM	ENSMUSG00000029580.15	ENSMUST00000100497.11	1920	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	106714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTCTGTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	142892509	142888869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142892406
ENSMUST00000100528.5	chr11	-	3997	7	FSM	ENSMUSG00000014349.8	ENSMUST00000100528.5	3997	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTTGGAATGAACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95956214	95938257	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777
ENSMUST00000100641.3	chr5	+	1148	2	FSM	ENSMUSG00000072573.3	ENSMUST00000100641.3	1148	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGAGTTTGTCTGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	134705343	134708999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_134705654_134708161
ENSMUST00000100705.11	chr11	-	1447	3	FSM	ENSMUSG00000018648.16	ENSMUST00000100705.11	1447	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTTATTAATCATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	83959183	83938866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_83940137_83941657_83941747_83959095
ENSMUST00000100729.9	chr5	+	2597	6	FSM	ENSMUSG00000029440.16	ENSMUST00000100729.9	2597	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCCTCTTGGGATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	123366252	123388194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_123366508_123372656_123372760_123377604_123377814_123379894_123379997_123384256_123384346_123386355
ENSMUST00000100782.4	chr11	+	2473	3	FSM	ENSMUSG00000037750.17	ENSMUST00000100782.4	2473	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTAAAAATGCATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	77985533	78046901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_77985618_78033918_78034041_78044634
ENSMUST00000100799.9	chr14	+	802	4	FSM	ENSMUSG00000012405.17	ENSMUST00000100799.9	802	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	4198725	4200736	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_4198852_4199235_4199418_4199652_4199790_4200379
ENSMUST00000100847.5	chr5	-	682	2	FSM	ENSMUSG00000072692.8	ENSMUST00000100847.5	682	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGTCTTCTCTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	115248327	115240981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_115241588_115248251
ENSMUST00000100850.6	chr5	-	420	2	FSM	ENSMUSG00000072694.9	ENSMUST00000100850.6	420	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGTTATCTATGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	114961506	114960499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_114960787_114961373
ENSMUST00000100955.3	chr17	+	879	3	FSM	ENSMUSG00000034345.15	ENSMUST00000100955.3	879	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTTTTACCCTGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	6130204	6135407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_6130350_6131076_6131150_6134746
ENSMUST00000101029.4	chr12	+	4001	23	FSM	ENSMUSG00000037679.10	ENSMUST00000101029.4	4001	23	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTGGAGAGGCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	112555217	112581391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_112555330_112566427_112566828_112567762_112567879_112567956_112568117_112568611_112568646_112569514_112569657_112570145_112570288_112570447_112571297_112571806_112571953_112572227_112572290_112572677_112572781_112573406_112573493_112573928_112574030_112574762_112574834_112574910_112575019_112575281_112575353_112576106_112576228_112576552_112576718_112576895_112576999_112577128_112577291_112577843_112578471_112578981_112579039_112581328
ENSMUST00000101049.9	chr11	+	2884	24	FSM	ENSMUSG00000020549.15	ENSMUST00000101049.9	2884	24	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTCAGTGTGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	64869899	64892426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ENSMUST00000101070.5	chr6	+	1201	2	FSM	ENSMUSG00000051256.11	ENSMUST00000101070.5	1201	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTGTTGGAGATTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	113419529	113425190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_113419759_113424218
ENSMUST00000101144.10	chr12	+	1541	10	FSM	ENSMUSG00000021007.15	ENSMUST00000101144.10	1541	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACATATTTATTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	98594425	98636074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_98594594_98598221_98598297_98600482_98600579_98603824_98603873_98614607_98614742_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
ENSMUST00000101165.9	chr12	+	2158	11	FSM	ENSMUSG00000021044.16	ENSMUST00000101165.9	2158	11	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGACTGTTCCTTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	88327323	88428489	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_88327366_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUST00000101168.4	chr12	-	1840	2	FSM	ENSMUSG00000079029.3	ENSMUST00000101168.4	1840	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAAGAAAAAGATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	88241270	88237409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_88239059_88241079
ENSMUST00000101285.10	chr6	-	623	3	FSM	ENSMUSG00000073002.10	ENSMUST00000101285.10	623	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCTCTCTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	72357405	72346010	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_72346454_72347176_72347315_72357363
ENSMUST00000101426.11	chr6	+	1540	7	FSM	ENSMUSG00000023367.15	ENSMUST00000101426.11	1540	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGTATATTTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	48818445	48822803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_48818524_48819137_48819336_48819522_48819634_48820718_48820776_48820894_48821114_48821601_48821713_48822037
ENSMUST00000101522.3	chr5	-	2110	1	FSM	ENSMUSG00000073147.4	ENSMUST00000101522.3	2110	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGTGGAATAACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	23638917	23636807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_23636800_23638900
ENSMUST00000101547.12	chr13	-	2147	4	FSM	ENSMUSG00000074865.12	ENSMUST00000101547.12	2147	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	62706325	62664610	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_62666545_62667985_62668047_62668231_62668359_62706300
ENSMUST00000101586.3	chr11	-	1590	19	FSM	ENSMUSG00000057897.15	ENSMUST00000101586.3	1590	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCCCTGCGGTGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	6015570	5922216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5931069_5931115_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUST00000101613.3	chr11	+	3735	21	FSM	ENSMUSG00000009090.18	ENSMUST00000101613.3	3735	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCTGGCCAGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	4959529	4992729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968096_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983241_4983263_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ENSMUST00000101663.10	chr6	+	3431	5	FSM	ENSMUSG00000041390.19	ENSMUST00000101663.10	3431	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTGCTTTAAGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	15720659	15802164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_15720963_15721185_15721364_15740986_15741110_15770212_15770492_15799616
ENSMUST00000101677.9	chr6	-	1656	11	FSM	ENSMUSG00000004631.16	ENSMUST00000101677.9	1656	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACATCAACGACTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	4747188	4674417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_4674633_4677162_4677234_4678066_4678111_4689578_4689768_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4719373_4719497_4746979
ENSMUST00000102476.5	chr2	+	860	4	FSM	ENSMUSG00000060802.9	ENSMUST00000102476.5	860	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5728	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	121978166	121983564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_121978286_121981353_121981633_121982127_121982157_121983131
ENSMUST00000102496.8	chr2	-	1848	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102496.8	1848	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	120439796	120434718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439669
ENSMUST00000102499.8	chr2	-	1961	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102499.8	1961	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	120440001	120434718	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439761
ENSMUST00000102507.10	chr4	+	1702	10	FSM	ENSMUSG00000028745.19	ENSMUST00000102507.10	1702	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	138920234	139019069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139016171_139016285_139018313
ENSMUST00000102508.10	chr4	+	1674	9	FSM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGCGCTGGCTGTACGTTC	NA	NA	NA	NA	NA	NA	NA	NA	138920209	139019129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
ENSMUST00000102528.11	chr5	+	2384	7	FSM	ENSMUSG00000004455.17	ENSMUST00000102528.11	2384	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGTCTTTCTGTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	122296340	122313336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117
ENSMUST00000102529.10	chr9	-	2875	18	FSM	ENSMUSG00000057969.16	ENSMUST00000102529.10	2875	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTGGAATGGCCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	107482601	107475553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482470
ENSMUST00000102531.7	chr9	-	2958	19	FSM	ENSMUSG00000057969.16	ENSMUST00000102531.7	2958	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTGGAATGGCCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	107486392	107475553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107486319
ENSMUST00000102533.11	chr4	+	1251	11	FSM	ENSMUSG00000001604.15	ENSMUST00000102533.11	1251	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGCTGAGCCCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	135975262	136002209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992240_135995319_135995475_135998543_135998691_136000954_136001027_136002090
ENSMUST00000102536.11	chr4	-	833	6	FSM	ENSMUSG00000059291.16	ENSMUST00000102536.11	833	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGGTTTGGATTTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135780704	135777041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780658
ENSMUST00000102552.8	chr4	-	676	7	FSM	ENSMUSG00000003038.16	ENSMUST00000102552.8	676	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGAACACTTCATTACT	NA	NA	NA	NA	NA	NA	NA	NA	133695961	133692723	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_133692885_133693261_133693358_133693739_133693791_133694076_133694107_133694267_133694313_133695105_133695221_133695783
ENSMUST00000102555.11	chr2	-	1197	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGAGTATTCTTTATAG	NA	NA	NA	NA	NA	NA	NA	NA	105833894	105797053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
ENSMUST00000102563.2	chr11	+	1352	16	FSM	ENSMUSG00000060216.16	ENSMUST00000102563.2	1352	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGAAACTTGGCTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	70323523	70331649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989_70331102_70331581
ENSMUST00000102564.11	chr11	+	1848	15	FSM	ENSMUSG00000060216.16	ENSMUST00000102564.11	1848	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGCTATGCCAGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	70323478	70331620	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ENSMUST00000102569.10	chr11	-	778	5	FSM	ENSMUSG00000020831.19	ENSMUST00000102569.10	778	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	70128740	70126031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70126291_70126521_70126627_70126849_70127038_70128356_70128452_70128609
ENSMUST00000102593.11	chr4	-	1123	11	FSM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGCAGCCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	129494441	129485752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494386
ENSMUST00000102597.5	chr4	-	2038	14	FSM	ENSMUSG00000028800.16	ENSMUST00000102597.5	2038	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGGTTGGTTTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	129436506	129409896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ENSMUST00000102602.8	chr11	+	751	5	FSM	ENSMUSG00000049299.15	ENSMUST00000102602.8	751	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	69214805	69216619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69214893_69214983_69215083_69215220_69215292_69215649_69215789_69216264
ENSMUST00000102604.11	chr4	+	1781	7	FSM	ENSMUSG00000028792.15	ENSMUST00000102604.11	1781	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTGTGGAGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128887016	128905322	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
ENSMUST00000102638.8	chr3	-	3650	18	FSM	ENSMUSG00000027889.18	ENSMUST00000102638.8	3650	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	107993943	107981377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
ENSMUST00000102642.9	chr2	+	1560	4	FSM	ENSMUSG00000027078.15	ENSMUST00000102642.9	1560	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCAGAAGTCGGACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	84629171	84640520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_84629277_84633122_84633219_84636680_84636868_84639348
ENSMUST00000102649.4	chr4	+	2074	11	FSM	ENSMUSG00000028653.17	ENSMUST00000102649.4	2074	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGCTGCATTGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	122910389	122948742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
ENSMUST00000102652.10	chr2	-	1646	13	FSM	ENSMUSG00000059173.20	ENSMUST00000102652.10	1646	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGATTTTGTCATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	79738777	79689368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_79689577_79695381_79695570_79695965_79696087_79698573_79698656_79705346_79705468_79705572_79705675_79708466_79708593_79718184_79718286_79727408_79727550_79728409_79728527_79732155_79732223_79736333_79736517_79738688
ENSMUST00000102676.9	chr2	-	1468	14	FSM	ENSMUSG00000009207.16	ENSMUST00000102676.9	1468	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGGATATTTGTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	74408567	74352383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_74352642_74358435_74358519_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74408541
ENSMUST00000102687.4	chr4	-	1566	11	FSM	ENSMUSG00000009640.12	ENSMUST00000102687.4	1566	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTTCCTCACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	117539470	117531877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539180_117539410
ENSMUST00000102693.9	chr11	-	961	7	FSM	ENSMUSG00000000301.17	ENSMUST00000102693.9	961	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGGTCTCCTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	59937307	59861439	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_59861702_59862009_59862085_59864893_59865006_59867664_59867811_59874268_59874385_59922538_59922647_59937165
ENSMUST00000102696.5	chr4	-	860	6	FSM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTTTGGAGAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	117013440	117011023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013254
ENSMUST00000102727.3	chr11	-	2471	25	FSM	ENSMUSG00000018340.14	ENSMUST00000102727.3	2471	25	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	54924271	54869933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ENSMUST00000102747.8	chr2	+	2271	11	FSM	ENSMUSG00000026977.18	ENSMUST00000102747.8	2271	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGATCTGTGAACATGTT	NA	NA	NA	NA	NA	NA	NA	NA	60040416	60078317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_60040429_60055113_60055215_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ENSMUST00000102769.11	chr2	-	1342	8	FSM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	50186729	50169892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
ENSMUST00000102774.11	chr11	-	2037	8	FSM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTGATCCGTACGAGT	NA	NA	NA	NA	NA	NA	NA	NA	50101654	50090978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_50091775_50093225_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ENSMUST00000102782.4	chr1	+	445	1	FSM	ENSMUSG00000078193.3	ENSMUST00000102782.4	445	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	312	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	156193609	156194054	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_156193600_156194100
ENSMUST00000102795.4	chr11	-	2088	11	FSM	ENSMUSG00000041231.16	ENSMUST00000102795.4	2088	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTATCTGTTTTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	44361325	44345397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357839_44361254
ENSMUST00000102805.4	chr16	+	1750	6	FSM	ENSMUSG00000090176.2	ENSMUST00000102805.4	1750	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGTCATGTGATATGA	NA	NA	NA	NA	NA	NA	NA	NA	44687459	44736203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_44687505_44698155_44698388_44729410_44729726_44729836_44730086_44734918_44735034_44735409
ENSMUST00000102817.5	chr16	-	1420	3	FSM	ENSMUSG00000047261.10	ENSMUST00000102817.5	1420	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTGTCTCTGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	42161014	42068804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_42069478_42112161_42112730_42160835
ENSMUST00000102840.5	chr2	+	1696	16	FSM	ENSMUSG00000076441.10	ENSMUST00000102840.5	1696	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCTGCGTGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	31360218	31410684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ENSMUST00000102844.4	chr11	-	637	5	FSM	ENSMUSG00000020460.16	ENSMUST00000102844.4	637	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	29497860	29495845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680
ENSMUST00000102880.5	chr11	+	2859	6	FSM	ENSMUSG00000033953.11	ENSMUST00000102880.5	2859	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAATGTATTGTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	17109262	17150375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_17109543_17132106_17132147_17142956_17143134_17144216_17144277_17144668_17144854_17148258
ENSMUST00000102898.5	chr2	+	914	8	FSM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGGTTATTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	26800775	26803330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
ENSMUST00000102926.5	chr4	+	1716	7	FSM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTACTCTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	46450901	46472657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ENSMUST00000102930.10	chr11	-	2174	18	FSM	ENSMUSG00000009079.17	ENSMUST00000102930.10	2174	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGAGTTTTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	5049042	5019896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041459_5041478_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ENSMUST00000102944.11	chr4	+	1884	9	FSM	ENSMUSG00000028466.16	ENSMUST00000102944.11	1884	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTTTTTACTGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	43562331	43567060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
ENSMUST00000102976.4	chr2	-	3215	6	FSM	ENSMUSG00000015619.11	ENSMUST00000102976.4	3215	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGTAACATTGTATCAAC	NA	NA	NA	NA	NA	NA	NA	NA	9883411	9861888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_9863466_9867905_9868032_9873571_9873718_9879199_9879737_9882162_9882796_9883215
ENSMUST00000102982.2	chr13	+	469	1	FSM	ENSMUSG00000069308.8	ENSMUST00000102982.2	469	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTACCTTACTCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	21971677	21972146	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_21971700_21972100
ENSMUST00000103002.8	chr12	-	2110	5	FSM	ENSMUSG00000076432.14	ENSMUST00000103002.8	2110	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATGGCTTTGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	21467437	21440329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798
ENSMUST00000103009.5	chr4	-	582	3	ISM	ENSMUSG00000028234.7	ENST00000521262.5	546	4	61	-21	61	21	intron_retention	FALSE	canonical	NA	NA	NA	NA	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGCTGGCTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	3835488	3834472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_3834684_3834935_3835010_3835191
ENSMUST00000103013.10	chr11	+	3906	39	FSM	ENSMUSG00000039230.15	ENSMUST00000103013.10	3906	39	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	121342774	121507990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469602_121470973_121470997_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ENSMUST00000103016.8	chr11	+	1689	15	FSM	ENSMUSG00000025142.19	ENSMUST00000103016.8	1689	15	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	120563889	120600270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120563997_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUST00000103038.8	chr11	-	1143	7	FSM	ENSMUSG00000015542.18	ENSMUST00000103038.8	1143	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	115078158	115073657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574_115077661_115077944
ENSMUST00000103040.11	chr11	-	1204	7	FSM	ENSMUSG00000015542.18	ENSMUST00000103040.11	1204	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	115078216	115073657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574_115077664_115077944
ENSMUST00000103060.10	chr11	-	2050	13	FSM	ENSMUSG00000041895.16	ENSMUST00000103060.10	2050	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGTTGTTTACATTT	NA	NA	NA	NA	NA	NA	NA	NA	109502258	109464156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_109464794_109467882_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ENSMUST00000103068.10	chr11	+	2597	19	FSM	ENSMUSG00000018372.14	ENSMUST00000103068.10	2597	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTTTTGAATTTATAAC	NA	NA	NA	NA	NA	NA	NA	NA	106680077	106709686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ENSMUST00000103094.11	chr2	-	1152	6	FSM	ENSMUSG00000017307.17	ENSMUST00000103094.11	1152	6	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	164646802	164634687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164644916_164645054_164646609
ENSMUST00000103098.9	chr11	+	4654	24	FSM	ENSMUSG00000017119.21	ENSMUST00000103098.9	4654	24	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	101443479	101472777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ENSMUST00000103110.10	chr11	+	2716	21	FSM	ENSMUSG00000019302.17	ENSMUST00000103110.10	2716	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGAGCAGCTCCCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	100900277	100953250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917485_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
ENSMUST00000103129.9	chr2	-	2080	11	FSM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTATGTGACAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	156848995	156837184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
ENSMUST00000103147.5	chr11	+	766	6	FSM	ENSMUSG00000069744.8	ENSMUST00000103147.5	766	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGCCTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	97594224	97604326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604218
ENSMUST00000103175.8	chr4	+	1309	7	FSM	ENSMUSG00000023286.17	ENSMUST00000103175.8	1309	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTGTGTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	156028287	156042168	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_156028471_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUST00000103180.4	chr4	+	1688	6	FSM	ENSMUSG00000029047.14	ENSMUST00000103180.4	1688	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGCCGGGCGTGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	155151472	155156890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155151632_155152279_155152361_155153119_155153527_155154843_155155020_155155097_155155234_155156161
ENSMUST00000103191.11	chr4	+	474	4	FSM	ENSMUSG00000028936.16	ENSMUST00000103191.11	474	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	152410309	152416937	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
ENSMUST00000103197.5	chr4	+	2271	12	FSM	ENSMUSG00000028948.17	ENSMUST00000103197.5	2271	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGTTCCTAGCCGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	152123792	152145951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152145709
ENSMUST00000103198.11	chr2	+	1877	12	FSM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	130116349	130121233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ENSMUST00000103208.2	chr4	-	3620	6	FSM	ENSMUSG00000044700.16	ENSMUST00000103208.2	3620	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCGTCTTTTTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	149822501	149809320	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ENSMUST00000103227.8	chr2	-	2751	10	FSM	ENSMUSG00000027361.16	ENSMUST00000103227.8	2751	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTCCATGCAGACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	126517464	126470834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126504910_126505009_126517275
ENSMUST00000103242.5	chr11	-	1375	3	FSM	ENSMUSG00000037278.10	ENSMUST00000103242.5	1375	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTGTTGTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	78441603	78432642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_78433623_78434311_78434457_78441353
ENSMUST00000103655.3	chr14	+	411	2	FSM	ENSMUSG00000093966.3	ENSMUST00000103655.3	411	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGCTCCCAGCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	53836284	53836867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_53836417_53836588
ENSMUST00000105140.3	chr4	+	1848	1	FSM	ENSMUSG00000078349.4	ENSMUST00000105140.3	1848	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCCTGAAAGGTGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	156287760	156289608	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_156287800_156289600
ENSMUST00000105177.3	chr7	-	1251	1	FSM	ENSMUSG00000003123.16	ENSMUST00000105177.3	1251	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCAGTCTGTCGAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	25098134	25096883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_25096900_25098100
ENSMUST00000105229.9	chr10	+	1043	8	FSM	ENSMUSG00000025351.15	ENSMUST00000105229.9	1043	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	128744688	128748691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_128744922_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ENSMUST00000105230.4	chr10	+	918	11	FSM	ENSMUSG00000078427.4	ENSMUST00000105230.4	918	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAGAAAATGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128657762	128713486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ENSMUST00000105265.8	chr10	-	2268	14	FSM	ENSMUSG00000020166.16	ENSMUST00000105265.8	2268	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGAATGTGTATATATTATA	NA	NA	NA	NA	NA	NA	NA	NA	116417406	116321413	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116384937_116385081_116417357
ENSMUST00000105324.9	chr10	-	1540	10	FSM	ENSMUSG00000020232.18	ENSMUST00000105324.9	1540	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTTAATATTTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	81186260	81181884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186106
ENSMUST00000105331.8	chr10	+	1556	11	FSM	ENSMUSG00000035027.19	ENSMUST00000105331.8	1556	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGCTGTGCTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	80941780	80959717	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
ENSMUST00000105349.8	chr10	-	1566	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105349.8	1566	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	80235384	80228372	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
ENSMUST00000105355.8	chr10	+	2127	5	FSM	ENSMUSG00000035504.17	ENSMUST00000105357.2	2127	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGTGTCCGCTAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	80165786	80172275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170943
ENSMUST00000105362.8	chr10	+	2081	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105362.8	2081	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTGCTGTCTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80100817	80124242	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ENSMUST00000105363.8	chr10	-	988	6	FSM	ENSMUSG00000020150.14	ENSMUST00000105363.8	988	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGTTGGCAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	80096846	80093984	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80094292_80094773_80094885_80095010_80095079_80095434_80095499_80095601_80095748_80096554
ENSMUST00000105366.2	chr10	+	781	3	FSM	ENSMUSG00000003072.16	ENSMUST00000105366.2	781	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTGTTCTGTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	79978203	79981646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79978441_79979665_79979820_79981256
ENSMUST00000105381.5	chr10	+	1240	6	FSM	ENSMUSG00000023175.16	ENSMUST00000105381.5	1240	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79545431	79547803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ENSMUST00000105408.4	chr10	-	708	2	FSM	ENSMUSG00000078444.4	ENSMUST00000105408.4	708	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGTTCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	77095057	77093609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_77093821_77094560
ENSMUST00000105447.11	chr10	-	2597	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTAAGTTTGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	62322584	62291055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ENSMUST00000105455.9	chr10	+	1512	10	FSM	ENSMUSG00000020085.16	ENSMUST00000105455.9	1512	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGAGCTTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	61551041	61574432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574177
ENSMUST00000105505.10	chr10	-	2071	9	FSM	ENSMUSG00000019813.17	ENSMUST00000105505.10	2071	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGGAAATATTCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	41621927	41594835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766
ENSMUST00000105539.2	chr10	-	1961	12	FSM	ENSMUSG00000019809.17	ENSMUST00000105539.2	1961	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATATAGCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	13428864	13399885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428692
ENSMUST00000105591.2	chr4	+	773	4	FSM	ENSMUSG00000065990.13	ENSMUST00000105591.2	773	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACTATAATAAATATTGG	NA	NA	NA	NA	NA	NA	NA	NA	155916125	155917488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155916224_155916439_155916528_155916808_155917255_155917347
ENSMUST00000105592.8	chr4	+	1029	3	FSM	ENSMUSG00000065990.13	ENSMUST00000105592.8	1029	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTAGGCCGACCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	155916115	155917518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_155916528_155916808_155917255_155917347
ENSMUST00000105673.8	chr4	-	919	7	FSM	ENSMUSG00000028964.15	ENSMUST00000105673.8	919	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGTAGTATGTGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	150994108	150981695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150993847
ENSMUST00000105692.2	chr4	+	634	4	FSM	ENSMUSG00000028988.14	ENSMUST00000105692.2	634	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTTATTTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	149629573	149648965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_149629692_149630167_149630289_149630858_149630950_149648661
ENSMUST00000105706.8	chr4	-	1938	6	FSM	ENSMUSG00000055401.15	ENSMUST00000105706.8	1938	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTCATCCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	148236365	148230172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148235544
ENSMUST00000105852.8	chr4	-	1588	10	FSM	ENSMUSG00000028670.15	ENSMUST00000105852.8	1588	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCCCTTATGTGGTACA	NA	NA	NA	NA	NA	NA	NA	NA	135699240	135695534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_135696379_135696454_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699169
ENSMUST00000105863.2	chr4	-	719	7	FSM	ENSMUSG00000028822.12	ENSMUST00000105863.2	719	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCACCCTGCTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	134642326	134625701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640573_134642199
ENSMUST00000105866.3	chr4	+	1275	3	FSM	ENSMUSG00000078521.3	ENSMUST00000105866.3	1275	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTGGTGTCGTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	134238309	134251238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_134238481_134248782_134248913_134250264
ENSMUST00000105887.8	chr4	-	2038	9	FSM	ENSMUSG00000012117.14	ENSMUST00000105887.8	2038	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACGAGGACTGAACAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	133728182	133697503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_133698568_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
ENSMUST00000105907.9	chr4	-	1484	6	FSM	ENSMUSG00000028857.17	ENSMUST00000105907.9	1484	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	133005103	132993355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132998273_132998359_133004841
ENSMUST00000105953.10	chr7	+	1049	16	FSM	ENSMUSG00000061723.19	ENSMUST00000105953.10	1049	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTATGTGTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	142052572	142069745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_142052637_142055356_142055392_142055565_142055580_142057784_142057803_142057986_142058002_142059252_142059268_142061486_142061526_142062071_142062091_142064400_142064447_142064993_142065111_142065201_142065280_142065772_142065887_142065992_142066103_142066268_142066360_142068062_142068104_142069512
ENSMUST00000105954.10	chr7	+	1052	16	FSM	ENSMUSG00000061723.19	ENSMUST00000105954.10	1052	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTATGTGTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	142052572	142069745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_142052637_142055356_142055392_142055565_142055580_142056476_142056495_142057784_142057803_142059252_142059268_142061486_142061526_142062071_142062091_142064400_142064447_142064993_142065111_142065201_142065280_142065772_142065887_142065992_142066103_142066268_142066360_142068062_142068104_142069512
ENSMUST00000105955.8	chr7	+	1028	16	FSM	ENSMUSG00000061723.19	ENSMUST00000105955.8	1028	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTATGTGTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	142052572	142069745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_142052637_142055356_142055392_142055565_142055580_142056476_142056495_142057784_142057803_142057986_142058002_142059252_142059268_142062071_142062091_142064400_142064447_142064993_142065111_142065201_142065280_142065772_142065887_142065992_142066103_142066268_142066360_142068062_142068104_142069512
ENSMUST00000105962.10	chr4	-	961	8	FSM	ENSMUSG00000028898.16	ENSMUST00000105962.10	961	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCTTCTTCAACTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	132056800	132039073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
ENSMUST00000105964.2	chr4	-	1925	10	FSM	ENSMUSG00000028901.14	ENSMUST00000105964.2	1925	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	131988913	131952981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
ENSMUST00000105967.8	chr7	+	1395	11	FSM	ENSMUSG00000018819.11	ENSMUST00000105967.8	1395	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGATCTCCTGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	142014600	142048340	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_142014704_142038215_142038363_142040083_142040243_142042155_142042253_142042602_142042678_142042865_142042910_142043061_142043144_142043636_142043772_142044081_142044160_142044295_142044403_142047972
ENSMUST00000105968.8	chr7	+	1727	11	FSM	ENSMUSG00000018819.11	ENSMUST00000105968.8	1727	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAGTCTGTTCCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	142014545	142048604	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_142014704_142038215_142038363_142040083_142040243_142042155_142042253_142042584_142042678_142042865_142042910_142043061_142043144_142043636_142043772_142044081_142044160_142044295_142044403_142047977
ENSMUST00000105971.8	chr7	+	732	8	FSM	ENSMUSG00000031097.16	ENSMUST00000105971.8	732	8	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGGTCTAGTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	141995544	141998147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_141995606_141996205_141996236_141996427_141996435_141996907_141996950_141997039_141997169_141997307_141997398_141997642_141997820_141997951
ENSMUST00000106000.10	chr7	+	1865	8	FSM	ENSMUSG00000025510.15	ENSMUST00000106000.10	1865	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCGAATCAGCTTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	141047305	141051386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_141047498_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ENSMUST00000106003.2	chr7	+	449	4	FSM	ENSMUSG00000025508.14	ENSMUST00000106003.2	449	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	141027762	141031263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_141027945_141028638_141028688_141030916_141031016_141031144
ENSMUST00000106004.8	chr7	+	421	5	FSM	ENSMUSG00000025508.14	ENSMUST00000106004.8	421	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	141027624	141031263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_141027655_141027820_141027945_141028638_141028688_141030916_141031016_141031144
ENSMUST00000106033.5	chr7	-	2091	10	FSM	ENSMUSG00000038650.16	ENSMUST00000106033.5	2091	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGGTCCTTGTCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	140749139	140740240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748588
ENSMUST00000106035.8	chr4	-	821	4	FSM	ENSMUSG00000028795.16	ENSMUST00000106035.8	821	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCTTAGCAATTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	129517671	129514268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129514670_129514776_129514944_129516392_129516581_129517606
ENSMUST00000106068.8	chr4	-	2049	11	FSM	ENSMUSG00000028789.17	ENSMUST00000106068.8	2049	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAACCCTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	128856221	128825814	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855876_128855995_128856093
ENSMUST00000106132.3	chr4	-	3195	17	FSM	ENSMUSG00000028849.18	ENSMUST00000106132.3	3195	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	126150136	126125959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ENSMUST00000106148.10	chr11	-	830	7	FSM	ENSMUSG00000039450.12	ENSMUST00000106148.10	830	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGATCTGTGCTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	120618069	120616224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120616434_120616563_120616723_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
ENSMUST00000106150.3	chr4	+	1144	2	FSM	ENSMUSG00000050212.5	ENSMUST00000106150.3	1144	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGCGACTCAGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	126042324	126043658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_126042839_126043028
ENSMUST00000106154.8	chr11	-	873	6	FSM	ENSMUSG00000025144.18	ENSMUST00000106154.8	873	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	120604558	120601767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120603265_120603539_120604518
ENSMUST00000106159.10	chr11	+	1615	15	FSM	ENSMUSG00000025142.19	ENSMUST00000106159.10	1615	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	120567486	120600270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120567520_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUST00000106190.10	chr4	-	968	3	FSM	ENSMUSG00000078570.11	ENSMUST00000106190.10	968	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGACCTTTCTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	124744602	124743277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_124743756_124744024_124744227_124744314
ENSMUST00000106197.10	chr11	-	1867	6	FSM	ENSMUSG00000025132.14	ENSMUST00000106197.10	1867	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGGTCTGTGCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	120472450	120468929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120472347
ENSMUST00000106205.9	chr11	+	2900	22	FSM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATGATTGATTGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	120358460	120374805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ENSMUST00000106211.3	chr3	+	1178	4	FSM	ENSMUSG00000037072.17	ENSMUST00000106211.3	1178	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTGATTTTAAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	144276453	144303422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144302583
ENSMUST00000106259.9	chr11	+	3633	20	FSM	ENSMUSG00000025579.15	ENSMUST00000106259.9	3633	20	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	119158712	119176280	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ENSMUST00000106291.10	chr3	+	1512	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	135143994	135171819	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUST00000106318.8	chr4	-	800	10	FSM	ENSMUSG00000060288.14	ENSMUST00000106318.8	800	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	NA	NA	NA	NA	NA	NA	NA	NA	119177743	119157206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_119157381_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
ENSMUST00000106354.9	chr11	+	3869	11	FSM	ENSMUSG00000059248.14	ENSMUST00000106354.9	3869	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	117123110	117253139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_117123546_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUST00000106355.5	chr4	-	1588	2	FSM	ENSMUSG00000045268.14	ENSMUST00000106355.5	1588	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTACTTATTTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	119031392	119026709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_119028240_119031334
ENSMUST00000106391.8	chr11	-	1841	10	FSM	ENSMUSG00000015869.17	ENSMUST00000106391.8	1841	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCTGCTGAGCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	116381174	116361670	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ENSMUST00000106393.8	chr4	+	843	7	NIC	ENSMUSG00000006395.17	novel	936	8	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATATGTGTATATTACAG	NA	NA	NA	NA	NA	NA	NA	NA	118217195	118219941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_118217429_118218812_118218928_118219070_118219150_118219237_118219288_118219387_118219458_118219559_118219695_118219780
ENSMUST00000106425.4	chr11	-	2330	15	FSM	ENSMUSG00000020780.16	ENSMUST00000106425.4	2330	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCTGGTTTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	116164961	116135991	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116162738_116162806_116164751
ENSMUST00000106429.6	chr3	+	1160	2	FSM	ENSMUSG00000054091.10	ENSMUST00000106429.6	1160	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTTCACACTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	122717851	122719833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_122718306_122719127
ENSMUST00000106452.2	chr11	+	3696	16	FSM	ENSMUSG00000020770.14	ENSMUST00000106452.2	3696	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	115921147	115952040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943946_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ENSMUST00000106466.10	chr3	-	1484	5	FSM	ENSMUSG00000028133.18	ENSMUST00000106466.10	1484	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTGTGTCTGAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	120965344	120949046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_120949707_120949835_120949952_120950049_120950166_120952416_120952905_120965240
ENSMUST00000106494.3	chr4	+	2226	21	FSM	ENSMUSG00000028700.15	ENSMUST00000106494.3	2226	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCTGAGTTTAAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	116008627	116016634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_116008821_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ENSMUST00000106517.9	chr7	+	1279	4	FSM	ENSMUSG00000030922.13	ENSMUST00000106517.9	1279	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTTGTTTTGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	119495514	119515976	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_119495796_119508893_119509186_119513395_119513489_119515363
ENSMUST00000106518.9	chr7	+	875	4	FSM	ENSMUSG00000030922.13	ENSMUST00000106518.9	875	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACAGCTTTAGATTGATC	NA	NA	NA	NA	NA	NA	NA	NA	119495083	119515956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_119495114_119509026_119509186_119513395_119513489_119515363
ENSMUST00000106520.9	chr7	+	2492	20	FSM	ENSMUSG00000030924.17	ENSMUST00000106520.9	2492	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTCCTCTTAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	119393232	119448166	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_119393293_119393580_119393726_119398787_119398901_119400452_119400580_119401963_119402061_119404365_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119423267_119423363_119424758_119424862_119426525_119426603_119427314_119427430_119431893_119431999_119433486_119433625_119442464_119442558_119443070_119443288_119443481_119443670_119444605_119444725_119447954
ENSMUST00000106530.8	chr11	-	836	5	FSM	ENSMUSG00000020736.13	ENSMUST00000106530.8	836	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGATCTTTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	115382641	115381245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115381596_115381678_115381794_115381963_115382025_115382096_115382198_115382432
ENSMUST00000106536.8	chr3	-	1839	15	FSM	ENSMUSG00000027981.15	ENSMUST00000106536.8	1839	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCTAATTTTTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	113423798	113399112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_113399297_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
ENSMUST00000106537.8	chr11	-	682	7	FSM	ENSMUSG00000034566.11	ENSMUST00000106537.8	682	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	115310743	115306514	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310017_115310120_115310717
ENSMUST00000106567.2	chr3	-	2450	1	FSM	ENSMUSG00000049300.12	ENSMUST00000106567.2	2450	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGCTGGGGCTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	110158314	110155864	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_110155900_110158300
ENSMUST00000106588.8	chr7	-	640	5	FSM	ENSMUSG00000008683.17	ENSMUST00000106588.8	640	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	117714900	117708286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117714694
ENSMUST00000106602.10	chr11	+	371	5	FSM	ENSMUSG00000057322.13	ENSMUST00000106602.10	371	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	114559349	114563157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_114559436_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ENSMUST00000106607.2	chr7	+	1153	3	FSM	ENSMUSG00000030663.13	ENSMUST00000106607.2	1153	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGATTGTGATGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	115692575	115704442	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_115692623_115702445_115702556_115703446
ENSMUST00000106609.8	chr3	+	2043	12	FSM	ENSMUSG00000027884.17	ENSMUST00000106609.8	2043	12	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	108561228	108586156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
ENSMUST00000106622.3	chr3	-	2752	3	FSM	ENSMUSG00000068732.6	ENSMUST00000106622.3	2752	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTGCTTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	108469486	108463740	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_108466277_108467502_108467635_108469402
ENSMUST00000106676.8	chr11	+	962	5	FSM	ENSMUSG00000020612.17	ENSMUST00000106676.8	962	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCTAACATTTTCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	109541400	109552579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_109541451_109544604_109544788_109550824_109550996_109551860_109551953_109552113
ENSMUST00000106683.8	chr3	-	745	5	FSM	ENSMUSG00000068762.12	ENSMUST00000106683.8	745	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCACTTTGAGCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	107850678	107846277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_107846633_107848308_107848420_107848504_107848601_107850017_107850083_107850560
ENSMUST00000106702.4	chr11	+	914	3	FSM	ENSMUSG00000020611.15	ENSMUST00000106702.4	914	3	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATGTCCTCTTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	109253656	109271301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_109254083_109256361_109256589_109271040
ENSMUST00000106749.8	chr4	+	607	6	FSM	ENSMUSG00000063172.14	ENSMUST00000106749.8	607	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCATTTTTTTTATATAA	NA	NA	NA	NA	NA	NA	NA	NA	107111099	107137135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_107111160_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
ENSMUST00000106753.3	chr4	+	1148	6	FSM	ENSMUSG00000028618.12	ENSMUST00000106753.3	1148	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGTTGTATTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	107035723	107057895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_107036115_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ENSMUST00000106907.9	chr4	+	1374	6	FSM	ENSMUSG00000028525.17	ENSMUST00000106907.9	1374	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACATGGCTTTGATCATA	NA	NA	NA	NA	NA	NA	NA	NA	102111938	102413121	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_102112654_102344407_102344603_102354818_102354856_102354950_102355022_102363189_102363240_102412815
ENSMUST00000106941.9	chr11	+	3699	22	FSM	ENSMUSG00000020694.18	ENSMUST00000106941.9	3699	22	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	105072352	105173003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ENSMUST00000106957.8	chr11	+	943	8	FSM	ENSMUSG00000061086.13	ENSMUST00000106957.8	943	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCGTTGATTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	104467810	104478041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_104467994_104468246_104468401_104471227_104471256_104474803_104474954_104475264_104475439_104475762_104475841_104476552_104476598_104477910
ENSMUST00000106978.8	chr7	+	841	6	FSM	ENSMUSG00000030649.19	ENSMUST00000106978.8	841	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTATTCCCTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	101530531	101548750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_101530610_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUST00000107098.8	chr11	-	1606	12	FSM	ENSMUSG00000018677.10	ENSMUST00000107098.8	1606	12	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAAAAAAAAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	102298315	102293810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296629_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ENSMUST00000107100.3	chr7	+	2335	3	FSM	ENSMUSG00000055407.15	ENSMUST00000107100.3	2335	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTCTCTGGCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98917552	98986344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_98918521_98964895_98965110_98985191
ENSMUST00000107147.2	chr4	+	1177	6	FSM	ENSMUSG00000038368.17	ENSMUST00000107147.2	1177	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTTATTTTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	88318801	88329248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_88318980_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ENSMUST00000107161.8	chr3	+	4260	21	FSM	ENSMUSG00000015522.19	ENSMUST00000107161.8	4260	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTTGTGTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	95341714	95404548	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401127_95401757_95401925_95402614
ENSMUST00000107213.8	chr11	+	4339	23	FSM	ENSMUSG00000017119.21	ENSMUST00000107213.8	4339	23	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	101443683	101472777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ENSMUST00000107249.8	chr11	+	732	4	FSM	ENSMUSG00000063316.14	ENSMUST00000107249.8	732	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	101333271	101336355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101333632_101334326_101334497_101336045_101336157_101336264
ENSMUST00000107284.8	chr11	-	4207	21	FSM	ENSMUSG00000006920.15	ENSMUST00000107284.8	4207	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCAAGTTGTGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	101117289	101081940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
ENSMUST00000107285.8	chr11	-	4193	21	FSM	ENSMUSG00000006920.15	ENSMUST00000107285.8	4193	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGCAAGTTGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	101117276	101081941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
ENSMUST00000107331.8	chr3	+	723	3	FSM	ENSMUSG00000074457.11	ENSMUST00000107331.8	723	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGTGTGCTCTCGCAA	NA	NA	NA	NA	NA	NA	NA	NA	90448455	90450169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_90448502_90449300_90449480_90449671
ENSMUST00000107342.2	chr3	-	2411	4	FSM	ENSMUSG00000001017.16	ENSMUST00000107342.2	2411	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGTTGAGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	90416792	90407001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_90407415_90410402_90410587_90413414_90414934_90416497
ENSMUST00000107376.8	chr11	+	1727	4	FSM	ENSMUSG00000017837.13	ENSMUST00000107376.8	1727	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCACTTCCTCTTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	100510069	100517625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_100510641_100515017_100515126_100515768_100516011_100516819
ENSMUST00000107420.8	chr4	+	2752	7	FSM	ENSMUSG00000059810.19	ENSMUST00000107420.8	2752	7	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGTGTATTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	62592275	62621255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_62592548_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ENSMUST00000107444.8	chr4	-	1247	12	FSM	ENSMUSG00000028393.11	ENSMUST00000107444.8	1247	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	62438131	62427405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438031
ENSMUST00000107460.8	chr3	-	785	5	FSM	ENSMUSG00000027953.14	ENSMUST00000107460.8	785	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	89177802	89175552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89175906_89175979_89176100_89177133_89177258_89177368_89177447_89177692
ENSMUST00000107485.8	chr11	+	2091	3	FSM	ENSMUSG00000052915.15	ENSMUST00000107485.8	2091	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGACTATCTTGGGATAT	NA	NA	NA	NA	NA	NA	NA	NA	98686616	98691878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_98687431_98689965_98690190_98690825
ENSMUST00000107491.11	chr3	-	1375	12	FSM	ENSMUSG00000068921.15	ENSMUST00000107491.11	1375	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	88857258	88830941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_88831221_88832600_88832719_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ENSMUST00000107495.5	chr7	+	1003	6	FSM	ENSMUSG00000078681.11	ENSMUST00000107495.5	1003	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAACTTTTTATTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	65343164	65351661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_65343318_65343598_65343692_65344890_65345076_65347443_65347619_65348839_65348916_65351340
ENSMUST00000107583.3	chr11	+	737	3	FSM	ENSMUSG00000078695.9	ENSMUST00000107583.3	737	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGTTTCTGTGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	97576778	97579447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_97577042_97577326_97577447_97579093
ENSMUST00000107584.8	chr11	+	546	4	FSM	ENSMUSG00000078695.9	ENSMUST00000107584.8	546	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGTTTCTGTGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	97576651	97579447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_97576691_97577008_97577042_97577326_97577447_97579093
ENSMUST00000107684.2	chr11	-	596	5	FSM	ENSMUSG00000006057.16	ENSMUST00000107684.2	596	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCATGTGCCTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	95966445	95963815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966382
ENSMUST00000107700.4	chr11	+	849	7	FSM	ENSMUSG00000006058.11	ENSMUST00000107700.4	849	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTTCCCCCAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	95925790	95938256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95938020
ENSMUST00000107704.2	chr4	+	1597	3	FSM	ENSMUSG00000039693.12	ENSMUST00000107704.2	1597	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTACACTGTGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	48540498	48561919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_48540569_48552379_48552831_48560843
ENSMUST00000107720.9	chr4	+	5770	8	FSM	ENSMUSG00000061455.14	ENSMUST00000107720.9	5770	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATTCCTGTTGTATATT	NA	NA	NA	NA	NA	NA	NA	NA	48124925	48186507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_48124959_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
ENSMUST00000107722.8	chr11	+	3063	10	FSM	ENSMUSG00000057522.16	ENSMUST00000107722.8	3063	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCTGTCATTGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	95304923	95384232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ENSMUST00000107724.9	chr11	+	2881	11	FSM	ENSMUSG00000057522.16	ENSMUST00000107724.9	2881	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCTGTCATTGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	95304905	95384232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ENSMUST00000107739.8	chr11	-	4636	25	FSM	ENSMUSG00000001507.17	ENSMUST00000107739.8	4636	25	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTCTGCTCCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	94960024	94935299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537
ENSMUST00000107752.12	chr7	+	1400	9	FSM	ENSMUSG00000030825.20	ENSMUST00000107752.12	1400	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGAGTGGTCGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	45204316	45216745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_45204491_45205478_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ENSMUST00000107808.3	chr4	-	679	3	FSM	ENSMUSG00000078713.9	ENSMUST00000107808.3	679	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCGTGGTTTTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	45108108	45105211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_45105645_45106838_45106889_45107912
ENSMUST00000107810.3	chr4	-	639	2	FSM	ENSMUSG00000078713.9	ENSMUST00000107810.3	639	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTTTTGTGTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	45108114	45105207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_45105645_45107912
ENSMUST00000107821.9	chr11	-	2050	11	FSM	ENSMUSG00000020863.16	ENSMUST00000107821.9	2050	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATATGAGGCATACTAG	NA	NA	NA	NA	NA	NA	NA	NA	94212814	94181886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_94182405_94183910_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ENSMUST00000107845.4	chr4	+	1031	5	FSM	ENSMUSG00000028478.19	ENSMUST00000107845.4	1031	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	44012685	44032846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_44013003_44018812_44018851_44019873_44019992_44025448_44025561_44032400
ENSMUST00000107847.10	chr4	+	1121	6	FSM	ENSMUSG00000028478.19	ENSMUST00000107847.10	1121	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	44012637	44032846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44031399_44031436_44032400
ENSMUST00000107849.10	chr4	+	1099	6	FSM	ENSMUSG00000028478.19	ENSMUST00000107849.10	1099	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	44012677	44032846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44030214_44030269_44032400
ENSMUST00000107855.2	chr4	+	1816	3	FSM	ENSMUSG00000028480.15	ENSMUST00000107855.2	1816	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCCTCTAATGCGATT	NA	NA	NA	NA	NA	NA	NA	NA	43957691	43979118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_43957774_43970499_43970578_43977462
ENSMUST00000107881.8	chr11	-	2476	3	ISM	ENSMUSG00000003949.17	ENST00000573945.5	3066	4	1484	580	1484	-580	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAACTATTCCGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	90279033	90229967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_90231801_90236583_90236805_90278611
ENSMUST00000107910.8	chr7	-	1948	10	FSM	ENSMUSG00000060601.14	ENSMUST00000107910.8	1948	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTGAGTACAAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	44203347	44199058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202182_44203002_44203133_44203232
ENSMUST00000107911.8	chr7	-	1988	10	FSM	ENSMUSG00000060601.14	ENSMUST00000107911.8	1988	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGAGCCCAGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	44203372	44199040	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202179_44203002_44203133_44203232
ENSMUST00000107912.8	chr7	-	1839	9	FSM	ENSMUSG00000060601.14	ENSMUST00000107912.8	1839	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	44203110	44199039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202182_44203002
ENSMUST00000107913.10	chr4	-	2098	9	FSM	ENSMUSG00000028464.17	ENSMUST00000107913.10	2098	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCAGGGCCCTTTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	43523388	43514711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_43516004_43518229_43518300_43518401_43518465_43518643_43518720_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522801_43523240
ENSMUST00000108030.9	chr11	+	1964	10	FSM	ENSMUSG00000020513.16	ENSMUST00000108030.9	1964	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCAGTCTGTTAAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	86435816	86458186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_86436057_86439608_86439829_86440149_86440298_86443613_86443831_86445898_86446131_86447520_86447614_86448550_86448716_86452061_86452203_86456510_86456695_86457862
ENSMUST00000108038.2	chr4	+	1859	10	FSM	ENSMUSG00000036073.18	ENSMUST00000108038.2	1859	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGAGGAGTAGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	41755227	41758695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083
ENSMUST00000108089.8	chr4	-	1336	7	FSM	ENSMUSG00000028416.14	ENSMUST00000108089.8	1336	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCTCTGTGGTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	40948281	40936397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
ENSMUST00000108126.8	chr4	-	2644	10	FSM	ENSMUSG00000028300.15	ENSMUST00000108126.8	2644	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGTTTTAGTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	35225834	35191286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35225787
ENSMUST00000108127.4	chr4	-	3193	11	FSM	ENSMUSG00000028300.15	ENSMUST00000108127.4	3193	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGTTTTAGTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	35225880	35191286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225787
ENSMUST00000108134.8	chr4	-	782	3	FSM	ENSMUSG00000028295.15	ENSMUST00000108134.8	782	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGAGTTTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34778364	34768663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_34769148_34771257_34771415_34778223
ENSMUST00000108141.2	chr7	-	1526	9	FSM	ENSMUSG00000036733.17	ENSMUST00000108141.2	1526	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGACTGGACTTAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	30349569	30340423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ENSMUST00000108182.10	chr3	-	4980	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTTTATTGCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	35987621	35946253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ENSMUST00000108195.10	chr3	-	659	6	FSM	ENSMUSG00000027679.14	ENSMUST00000108195.10	659	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTCATTGCTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	34135470	34131427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135334
ENSMUST00000108196.8	chr7	-	1192	10	FSM	ENSMUSG00000001794.14	ENSMUST00000108196.8	1192	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGACTCTGAGTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	29892531	29886414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29892454
ENSMUST00000108237.2	chr7	+	1086	7	FSM	ENSMUSG00000030588.13	ENSMUST00000108237.2	1086	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGGGGGGCCTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	28937876	28947018	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_28938037_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945325_28945420_28946661
ENSMUST00000108268.10	chr11	-	1520	10	FSM	ENSMUSG00000001123.16	ENSMUST00000108268.10	1520	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGATGGCTGGCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	78875772	78853799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_78854368_78856517_78856681_78856823_78856913_78857702_78857745_78858269_78858321_78858823_78858860_78862142_78862254_78863813_78864016_78867438_78867528_78875603
ENSMUST00000108278.9	chr7	+	1806	8	NNC	ENSMUSG00000030598.16	novel	1958	7	NA	NA	28	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	28416256	28437563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763_28436972_28437089
ENSMUST00000108279.9	chr7	+	1563	7	FSM	ENSMUSG00000030598.16	ENSMUST00000108279.9	1563	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	28416297	28437569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28437089
ENSMUST00000108283.8	chr7	-	2899	10	FSM	ENSMUSG00000030602.14	ENSMUST00000108283.8	2899	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATGTGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	28297610	28258243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28297459
ENSMUST00000108295.8	chr11	+	1371	5	FSM	ENSMUSG00000002058.14	ENSMUST00000108295.8	1371	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTGTCTATAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	78234331	78239990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_78234613_78238043_78238158_78238622_78238726_78238912_78239086_78239290
ENSMUST00000108337.8	chr4	-	2836	13	FSM	ENSMUSG00000028207.19	ENSMUST00000108337.8	2836	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGATTGTCATTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	9669162	9575266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ENSMUST00000108357.8	chr7	+	782	5	FSM	ENSMUSG00000040466.17	ENSMUST00000108357.8	782	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTCCTCTCTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	27151842	27165409	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_27151976_27158680_27158846_27158987_27159078_27161991_27162121_27165144
ENSMUST00000108429.8	chr7	+	633	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108429.8	633	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	24584138	24589231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_24584295_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ENSMUST00000108448.8	chr11	-	3239	9	FSM	ENSMUSG00000001323.18	ENSMUST00000108448.8	3239	9	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTTATTTGGGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	74816599	74797618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803959_74810262_74810489_74816444
ENSMUST00000108474.2	chr7	+	2591	16	FSM	ENSMUSG00000030409.17	ENSMUST00000108474.2	2591	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGCGCAATATCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	18817865	18827746	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_18818080_18819910_18820003_18820256_18820341_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822035_18822112_18822190_18822835_18822922_18824853_18824966_18825605_18825770_18825863_18825962_18826132_18826180_18826467_18826558_18826874
ENSMUST00000108530.2	chr11	-	2389	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108530.2	2389	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGAATAAATTTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	70860780	70833927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUST00000108531.8	chr11	-	2453	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108531.8	2453	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCTTTACAATTAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	70860799	70833897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUST00000108539.8	chr7	+	794	6	FSM	ENSMUSG00000012848.16	ENSMUST00000108539.8	794	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCCTGTGTGCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	12656216	12660612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_12656350_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ENSMUST00000108542.8	chr11	-	1080	7	FSM	ENSMUSG00000057054.12	ENSMUST00000108542.8	1080	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCGAGGTAGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	70590981	70579186	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70579576_70579810_70579971_70580571_70580766_70581008_70581049_70581264_70581379_70586689_70586775_70590883
ENSMUST00000108548.8	chr11	+	1564	12	FSM	ENSMUSG00000060600.16	ENSMUST00000108548.8	1564	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGTGTTCCTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	70548029	70553339	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70548094_70548585_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ENSMUST00000108575.9	chr11	-	643	4	FSM	ENSMUSG00000020831.19	ENSMUST00000108575.9	643	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	70128679	70126031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70126295_70126822_70127038_70128356_70128452_70128609
ENSMUST00000108578.9	chr11	-	880	6	FSM	ENSMUSG00000020831.19	ENSMUST00000108578.9	880	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	70128740	70126031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70126291_70126521_70126627_70126849_70127038_70127702_70127805_70128356_70128452_70128609
ENSMUST00000108579.8	chr11	-	667	4	FSM	ENSMUSG00000020831.19	ENSMUST00000108579.8	667	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	70128730	70126031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70126295_70126849_70127038_70128356_70128452_70128609
ENSMUST00000108593.8	chr11	+	1627	8	FSM	ENSMUSG00000018559.17	ENSMUST00000108593.8	1627	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCCTAGACCCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	69871981	69881427	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69872412_69875079_69875147_69875241_69875361_69875559_69875632_69879438_69879556_69879653_69879766_69880307_69880393_69880802
ENSMUST00000108594.8	chr11	-	1454	9	FSM	ENSMUSG00000018565.18	ENSMUST00000108594.8	1454	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGTAATGCTTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	69872078	69859049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039_69871389_69872032
ENSMUST00000108607.8	chr11	-	852	7	FSM	ENSMUSG00000078812.11	ENSMUST00000108607.8	852	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAGTTGGGTACTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	69812016	69807922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166_69811249_69811988
ENSMUST00000108608.8	chr11	-	775	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108608.8	775	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGCTTGTGGTTTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	69811890	69807912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811867
ENSMUST00000108609.8	chr11	-	849	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108609.8	849	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAAGCTGGATTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	69811890	69807856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811849
ENSMUST00000108613.10	chr11	-	1343	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	69812212	69807545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
ENSMUST00000108625.8	chr7	+	914	4	FSM	ENSMUSG00000006333.15	ENSMUST00000108625.8	914	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTTTCCAGCTGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	3707050	3709856	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_3707448_3707644_3707768_3708731_3708919_3709649
ENSMUST00000108627.4	chr7	+	1319	4	FSM	ENSMUSG00000035585.17	ENSMUST00000108627.4	1319	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	3697521	3704003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_3697844_3697976_3698227_3698350_3698621_3703526
ENSMUST00000108629.8	chr7	+	1238	5	FSM	ENSMUSG00000035585.17	ENSMUST00000108629.8	1238	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	3696807	3704003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3703613
ENSMUST00000108632.8	chr11	+	1835	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108632.8	1835	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTAGAAGCCGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	69737201	69741862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69737349_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ENSMUST00000108636.2	chr7	+	1798	13	FSM	ENSMUSG00000008373.17	ENSMUST00000108636.2	1798	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGGTGTGAGTGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	3633555	3644228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641647_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ENSMUST00000108656.9	chr11	+	968	6	FSM	ENSMUSG00000069835.11	ENSMUST00000108656.9	968	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGCAGCCATTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	69512849	69514696	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69513159_69513318_69513371_69513532_69513617_69513685_69513788_69513937_69513979_69514316
ENSMUST00000108657.4	chr11	+	1822	11	FSM	ENSMUSG00000059552.14	ENSMUST00000108657.4	1822	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	69471230	69482699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
ENSMUST00000108662.2	chr11	+	635	4	FSM	ENSMUSG00000049299.15	ENSMUST00000108662.2	635	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	69214982	69216619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69215083_69215220_69215292_69215679_69215789_69216264
ENSMUST00000108672.2	chr11	-	1653	8	FSM	ENSMUSG00000018736.15	ENSMUST00000108672.2	1653	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	68743867	68720143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
ENSMUST00000108675.2	chr11	+	1497	3	FSM	ENSMUSG00000020903.14	ENSMUST00000108675.2	1497	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATGGGGGCCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	67857305	67865417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_67857344_67860597_67860698_67864058
ENSMUST00000108697.8	chr11	+	2612	24	FSM	ENSMUSG00000020549.15	ENSMUST00000108697.8	2612	24	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTCAGCCTGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	64869896	64892154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883267_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ENSMUST00000108713.8	chr11	-	4207	9	FSM	ENSMUSG00000001036.18	ENSMUST00000108713.8	4207	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	61470511	61408074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ENSMUST00000108716.8	chr11	+	1721	11	FSM	ENSMUSG00000019102.11	ENSMUST00000108716.8	1721	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATGCAATGCTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	61099446	61109247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_61099608_61103052_61103220_61104276_61104509_61105010_61105097_61105375_61105585_61106315_61106434_61107104_61107247_61107906_61108074_61108488_61108589_61108816_61108948_61109039
ENSMUST00000108787.9	chr11	+	718	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108787.9	718	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTCATTGTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	59093314	59096714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_59093486_59094997_59095082_59095360_59095584_59096474
ENSMUST00000108841.2	chr2	+	689	5	FSM	ENSMUSG00000016344.15	ENSMUST00000108841.2	689	5	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGTATGTTTGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	180829128	180830297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_180829248_180829457_180829530_180829601_180829680_180829796_180829894_180829974
ENSMUST00000108858.8	chr11	-	2115	10	FSM	ENSMUSG00000018593.14	ENSMUST00000108858.8	2115	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	55310724	55285325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298103_55300753_55300824_55310613
ENSMUST00000108883.10	chr11	-	2489	26	FSM	ENSMUSG00000018340.14	ENSMUST00000108883.10	2489	26	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	54924271	54869933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ENSMUST00000108923.2	chr2	-	1372	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAATTTTAAAAGAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	177720269	177710282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_177711409_177711615_177711743_177720150
ENSMUST00000108928.2	chr2	-	767	4	FSM	ENSMUSG00000078862.11	ENSMUST00000108928.2	767	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCAGCTGTGTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	177599032	177589470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_177590024_177590229_177590357_177595474_177595530_177599000
ENSMUST00000108955.2	chr2	-	1415	4	FSM	ENSMUSG00000078867.10	ENSMUST00000108955.2	1415	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTCATATAGATAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	177090112	177079877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_177081015_177081219_177081347_177086489_177086545_177090016
ENSMUST00000109084.8	chr2	+	1695	11	FSM	ENSMUSG00000027523.21	ENSMUST00000109084.8	1695	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	174171889	174188537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_174172228_174176004_174176078_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUST00000109085.8	chr2	+	1789	11	FSM	ENSMUSG00000027523.21	ENSMUST00000109085.8	1789	11	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	3040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	174171798	174188537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_174172228_174176004_174176078_174183442_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUST00000109087.8	chr2	+	1716	12	FSM	ENSMUSG00000027523.21	ENSMUST00000109087.8	1716	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATCAATAAAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	174171881	174188505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUST00000109113.8	chr11	+	1627	11	FSM	ENSMUSG00000020385.17	ENSMUST00000109113.8	1627	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGATTGAGTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	51154012	51172593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_51154097_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ENSMUST00000109140.10	chr2	-	1862	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109140.10	1862	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTGGGTAATCATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	172212455	172198109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ENSMUST00000109203.9	chr13	+	1525	11	FSM	ENSMUSG00000025451.16	ENSMUST00000109203.9	1525	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTAGCTGGTTAGATG	NA	NA	NA	NA	NA	NA	NA	NA	119565136	119593927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_119565177_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUST00000109207.10	chr2	-	2041	4	FSM	ENSMUSG00000078923.11	ENSMUST00000109207.10	2041	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCAGGCTGTGCCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	167474015	167449557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167473859
ENSMUST00000109256.11	chr15	+	1154	8	FSM	ENSMUSG00000036167.17	ENSMUST00000109256.11	1154	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTAAAGTATCTTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	93296230	93387189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ENSMUST00000109350.9	chr2	+	1055	4	FSM	ENSMUSG00000017734.16	ENSMUST00000109350.9	1055	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCTCATTCTTCATAT	NA	NA	NA	NA	NA	NA	NA	NA	164328025	164332687	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_164328164_164330161_164330309_164330487_164330626_164332055
ENSMUST00000109394.3	chr8	+	2487	5	FSM	ENSMUSG00000031885.15	ENSMUST00000109394.3	2487	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAGTCATGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	105897576	105944613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_105897686_105897937_105898025_105921106_105921224_105929083_105929180_105942535
ENSMUST00000109416.3	chr2	+	1094	5	FSM	ENSMUSG00000078949.3	ENSMUST00000109416.3	1094	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGACATCTTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	163334237	163344532	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_163334673_163337608_163337728_163340214_163340348_163341734_163341851_163344241
ENSMUST00000109444.3	chr13	+	5285	17	FSM	ENSMUSG00000021669.16	ENSMUST00000109444.3	5285	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGATTTGTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	96679242	96776675	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ENSMUST00000109457.3	chr2	+	3215	20	FSM	ENSMUSG00000027412.13	ENSMUST00000109457.3	3215	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTAGGCCATTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	160730090	160747712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_160730138_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743547_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ENSMUST00000109504.8	chr11	-	1642	12	FSM	ENSMUSG00000064090.15	ENSMUST00000109504.8	1642	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAGAAAGAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	26541729	26421321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586
ENSMUST00000109521.4	chr8	+	1580	9	FSM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTGCTTTAATTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	95584077	95590870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ENSMUST00000109531.8	chr2	+	3586	12	FSM	ENSMUSG00000027646.16	ENSMUST00000109531.8	3586	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	157297590	157313758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_157297688_157299000_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ENSMUST00000109533.8	chr2	+	3813	14	FSM	ENSMUSG00000027646.16	ENSMUST00000109533.8	3813	14	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGGTCAGCAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	157260363	157313755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_157260433_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ENSMUST00000109609.9	chr8	-	1171	10	FSM	ENSMUSG00000031667.17	ENSMUST00000109609.9	1171	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTGGCTATCAGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	91860651	91851096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857777_91860527
ENSMUST00000109620.10	chr15	+	2459	9	FSM	ENSMUSG00000009585.19	ENSMUST00000109620.10	2459	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGTCTCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79776608	79792630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUST00000109632.8	chr2	-	2313	9	FSM	ENSMUSG00000005882.19	ENSMUST00000109632.8	2313	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTCCTGGAATGGATG	NA	NA	NA	NA	NA	NA	NA	NA	155771963	155688815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_155690447_155693278_155693393_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ENSMUST00000109638.2	chr2	-	1382	2	FSM	ENSMUSG00000027613.16	ENSMUST00000109638.2	1382	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTCCTTATGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	155668583	155667085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_155668131_155668246
ENSMUST00000109659.9	chr11	-	1954	15	FSM	ENSMUSG00000020182.17	ENSMUST00000109659.9	1954	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGAGTAAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	11840408	11764102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774848_11774869_11779101_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11840337
ENSMUST00000109664.2	chr11	-	2807	3	FSM	ENSMUSG00000035455.13	ENSMUST00000109664.2	2807	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGCAAGATGTAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	11758932	11750551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_11753064_11755958_11756216_11758894
ENSMUST00000109701.10	chr2	+	1709	8	FSM	ENSMUSG00000027593.16	ENSMUST00000109701.10	1709	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCTGAGGTGGAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	154633015	154709165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_154633469_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ENSMUST00000109721.3	chr11	+	1551	9	FSM	ENSMUSG00000000378.16	ENSMUST00000109721.3	1551	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCCAGTTGTCAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	6511229	6546742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_6511242_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ENSMUST00000109731.8	chr2	-	2160	15	FSM	ENSMUSG00000027487.12	ENSMUST00000109731.8	2160	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTCTACTTTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	154214930	154177299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600_154214775_154214881
ENSMUST00000109733.8	chr8	+	1590	6	FSM	ENSMUSG00000005161.16	ENSMUST00000109733.8	1590	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTAGGCTCTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	85696395	85701463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85696638_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ENSMUST00000109734.8	chr8	+	1612	6	FSM	ENSMUSG00000005161.16	ENSMUST00000109734.8	1612	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTAGGCTCTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	85696215	85701463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_85696392_85696780_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ENSMUST00000109742.11	chr13	-	2416	4	FSM	ENSMUSG00000058883.17	ENSMUST00000109742.11	2416	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCAGTGTCGTGTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	67229576	67217462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_67219593_67222149_67222246_67222896_67223024_67229513
ENSMUST00000109775.4	chr15	+	1573	3	FSM	ENSMUSG00000068246.7	ENSMUST00000109775.4	1573	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTCTGACTCGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	77613293	77620582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_77613447_77618664_77618791_77619288
ENSMUST00000109802.3	chr8	-	2867	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCACGTTTGCTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	84467802	84449992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ENSMUST00000109816.8	chr2	+	3483	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTCTTGTTGTCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	152689897	152736574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUST00000109820.5	chr2	-	2568	3	FSM	ENSMUSG00000007659.19	ENSMUST00000109820.5	2568	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCACAGCCTTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	152672586	152622591	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152624203_152671346_152672023_152672305
ENSMUST00000109824.2	chr2	+	1160	1	FSM	ENSMUSG00000042745.10	ENSMUST00000109824.2	1160	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	347	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTGTGACTTCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	152578170	152579330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_152578200_152579300
ENSMUST00000109825.8	chr2	+	1063	4	FSM	ENSMUSG00000019188.17	ENSMUST00000109825.8	1063	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGGCTACGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	152511407	152528621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017
ENSMUST00000109845.8	chr11	+	2001	13	FSM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTCAGCCCATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	5738487	5750629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ENSMUST00000109847.9	chr2	-	2384	12	FSM	ENSMUSG00000027466.16	ENSMUST00000109847.9	2384	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	152174332	152158253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ENSMUST00000109878.9	chr11	+	1611	8	FSM	ENSMUSG00000034175.14	ENSMUST00000109878.9	1611	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5050156	5056091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_5050227_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
ENSMUST00000109921.9	chr13	-	2378	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109921.9	2378	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTAGCTTAGTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	55635874	55621756	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_55622107_55622268_55622375_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
ENSMUST00000109950.5	chr8	+	1024	7	FSM	ENSMUSG00000031622.17	ENSMUST00000109950.5	1024	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGTTATGTGCAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	73449912	73466534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73466357
ENSMUST00000109990.8	chr11	-	1914	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109990.8	1914	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	3881960	3867191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3881926
ENSMUST00000109991.8	chr11	-	1943	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109991.8	1943	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	3882078	3867191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881585_3882012
ENSMUST00000109992.8	chr11	-	1945	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109992.8	1945	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	3881789	3867191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3881724
ENSMUST00000109995.2	chr11	-	3063	2	FSM	ENSMUSG00000048807.3	ENSMUST00000109995.2	3063	2	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTGTCATTCCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	3864664	3857020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_3857985_3862565
ENSMUST00000110001.4	chr12	-	3063	9	FSM	ENSMUSG00000041645.15	ENSMUST00000110001.4	3063	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGAGGGTGTTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	103392039	103374241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103391784
ENSMUST00000110052.2	chr8	+	5285	2	FSM	ENSMUSG00000002396.9	ENSMUST00000110052.2	5285	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATATATGCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	71823989	71832005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_71824630_71827360
ENSMUST00000110054.8	chr8	+	973	9	FSM	ENSMUSG00000002395.15	ENSMUST00000110054.8	973	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTCTTCAGTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	71819585	71822376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
ENSMUST00000110082.11	chr12	+	4115	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTGAACTGTGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	100165693	100176073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUST00000110086.2	chr13	-	2628	15	FSM	ENSMUSG00000037946.12	ENSMUST00000110086.2	2628	15	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACAGGTTCATCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	49473787	49426857	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_49427249_49428390_49428499_49429085_49429117_49431012_49431093_49431989_49432083_49433527_49433675_49434692_49434752_49435292_49435432_49439169_49439327_49440761_49440899_49443039_49443130_49449806_49450298_49451382_49451539_49469858_49470039_49473418
ENSMUST00000110089.9	chr2	-	3178	6	FSM	ENSMUSG00000027274.17	ENSMUST00000110089.9	3178	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATACAATCCTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	136733309	136715699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136732962
ENSMUST00000110103.2	chr8	-	1380	3	FSM	ENSMUSG00000038508.8	ENSMUST00000110103.2	1380	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCGTCTCAGTGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	71085106	71082043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_71082825_71083982_71084275_71084799
ENSMUST00000110149.2	chr12	+	1851	2	FSM	ENSMUSG00000079031.2	ENSMUST00000110149.2	1851	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAGATTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	87783346	87787446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_87783537_87785785
ENSMUST00000110158.8	chr2	+	1247	4	FSM	ENSMUSG00000058793.15	ENSMUST00000110158.8	1247	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCTGAGCCCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	132105067	132138113	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450
ENSMUST00000110163.8	chr2	-	1551	4	FSM	ENSMUSG00000027341.11	ENSMUST00000110163.8	1551	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTTGTTATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	132089689	132081411	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089515
ENSMUST00000110167.5	chr8	-	1251	5	FSM	ENSMUSG00000036199.10	ENSMUST00000110167.5	1251	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACTCTATAGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	70355208	70346829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_70347061_70347153_70347226_70347891_70347971_70354191_70354383_70354530
ENSMUST00000110208.8	chr2	+	1521	3	FSM	ENSMUSG00000068264.12	ENSMUST00000110208.8	1521	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	131052359	131055434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_131052602_131053182_131053394_131054366
ENSMUST00000110220.9	chr12	+	2655	13	FSM	ENSMUSG00000012609.20	ENSMUST00000110220.9	2655	13	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCTTGTTATTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	85871480	85931212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85930077
ENSMUST00000110233.8	chr13	-	2875	13	FSM	ENSMUSG00000044566.16	ENSMUST00000110233.8	2875	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTAACTTATTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	38220899	38190027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_38190150_38191915_38191985_38195323_38195395_38196367_38196473_38199655_38199764_38200386_38200468_38201272_38201384_38203142_38203290_38206388_38207445_38209258_38209780_38212078_38212167_38216340_38216601_38220763
ENSMUST00000110251.9	chr13	-	1395	10	FSM	ENSMUSG00000021417.16	ENSMUST00000110251.9	1395	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATCAAGCCTTAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	35178115	35161739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177204_35177996
ENSMUST00000110276.8	chr12	+	1776	13	FSM	ENSMUSG00000021235.14	ENSMUST00000110276.8	1776	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTCTTTTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	84408430	84420566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_84408594_84408726_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ENSMUST00000110298.9	chr12	-	3435	10	NNC	ENSMUSG00000021224.16	novel	3397	10	NA	NA	-21286	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTATAGTTCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	83923584	83840809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858080_83878695_83878771_83888991_83889133_83923441
ENSMUST00000110319.3	chr2	+	1484	4	FSM	ENSMUSG00000042851.18	ENSMUST00000110319.3	1484	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTTTACTGGAGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	128809328	128836050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_128809757_128833010_128833192_128835078_128835202_128835298
ENSMUST00000110340.9	chr12	-	668	4	FSM	ENSMUSG00000091803.8	ENSMUST00000110340.9	668	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTCTCAGTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	81531884	81405799	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81531670
ENSMUST00000110351.8	chr12	+	1498	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110351.8	1498	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	80992305	80997277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
ENSMUST00000110354.8	chr12	+	1489	9	FSM	ENSMUSG00000021134.18	ENSMUST00000110354.8	1489	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	80992293	80997277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_80992355_80992375_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
ENSMUST00000110356.3	chr12	+	1568	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110356.3	1568	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	80992358	80997277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ENSMUST00000110376.8	chr8	+	2043	6	FSM	ENSMUSG00000031631.16	ENSMUST00000110376.8	2043	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTTGATTCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	46616771	46648623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_46616901_46622595_46623690_46634754_46635024_46644616_46644768_46645621_46645729_46648330
ENSMUST00000110378.9	chr8	-	3445	19	FSM	ENSMUSG00000038291.17	ENSMUST00000110378.9	3445	19	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTCAAAGGTATTATATG	NA	NA	NA	NA	NA	NA	NA	NA	46605196	46486297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327_46500469_46502402_46502535_46507355_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098_46577184_46604818
ENSMUST00000110424.9	chr2	-	2613	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110424.9	2613	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCATGCAGACTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	126517422	126470832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ENSMUST00000110437.4	chr2	+	1276	4	FSM	ENSMUSG00000023330.13	ENSMUST00000110437.4	1276	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCCCTTACCTTTCGACT	NA	NA	NA	NA	NA	NA	NA	NA	125996460	126007199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_125996781_126000329_126000474_126001689_126001949_126006646
ENSMUST00000110464.8	chr12	+	1759	6	FSM	ENSMUSG00000021109.14	ENSMUST00000110464.8	1759	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTCCCAGACAGCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	73954677	73979850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047
ENSMUST00000110523.2	chr15	+	2088	6	FSM	ENSMUSG00000058914.13	ENSMUST00000110523.2	2088	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTTAAATGTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	10952442	10979792	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_10952843_10958042_10958155_10960713_10960869_10972066_10972197_10975676_10975777_10978601
ENSMUST00000110557.5	chr5	+	1137	3	FSM	ENSMUSG00000029642.12	ENSMUST00000110557.5	1137	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCCTCTTTTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	147014155	147048171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_147014504_147038038_147038114_147047457
ENSMUST00000110594.4	chr13	-	842	5	FSM	ENSMUSG00000079092.5	ENSMUST00000110594.4	842	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGTCTCAATGGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	13179968	13170709	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_13170997_13171869_13172053_13173165_13173274_13176718_13176895_13179880
ENSMUST00000110615.8	chr2	+	876	3	FSM	ENSMUSG00000074884.13	ENSMUST00000110615.8	876	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCCCCACACCGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	121279858	121281771	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_121279923_121280455_121280565_121281068
ENSMUST00000110621.3	chr12	+	1500	4	FSM	ENSMUSG00000034883.10	ENSMUST00000110621.3	1500	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATGTCTCAGCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	69215587	69225783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_69215837_69218635_69218735_69221165_69221888_69225353
ENSMUST00000110690.9	chr15	+	3527	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTGTGTGTCCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	4055864	4184826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ENSMUST00000110695.8	chr5	+	669	3	FSM	ENSMUSG00000047843.17	ENSMUST00000110695.8	669	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTAGCTTGTTCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	144181246	144201205	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_144181426_144192619_144192723_144200818
ENSMUST00000110730.10	chr8	-	2050	16	FSM	ENSMUSG00000031478.17	ENSMUST00000110730.10	2050	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTGTGCTGGTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	22656451	22618298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622216_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339_22652511_22656393
ENSMUST00000110731.4	chr5	+	1829	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTATGGTCTTTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	143389592	143407656	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
ENSMUST00000110784.8	chr5	-	3106	14	FSM	ENSMUSG00000029576.18	ENSMUST00000110784.8	3106	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAAACTATCTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	142495414	142470621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_142471004_142471167_142471308_142471609_142471747_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142495262
ENSMUST00000110834.8	chr2	-	828	3	FSM	ENSMUSG00000039983.14	ENSMUST00000110834.8	828	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATATTTGTTAAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	118859874	118852214	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_118852707_118857618_118857869_118859788
ENSMUST00000110851.8	chr5	-	3121	7	FSM	ENSMUSG00000053581.14	ENSMUST00000110851.8	3121	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATTCTAGACAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	139470272	139456970	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_139459310_139459484_139459551_139460607_139460760_139464221_139464354_139467720_139467816_139468456_139468553_139470031
ENSMUST00000110878.2	chr5	+	1180	9	FSM	ENSMUSG00000025858.13	ENSMUST00000110878.2	1180	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCTCTGCTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	139239265	139255084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_139239357_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
ENSMUST00000110891.8	chr1	-	1214	10	FSM	ENSMUSG00000026632.18	ENSMUST00000110891.8	1214	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTATTTTTAAAAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	190795101	190778038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_190778534_190781478_190781560_190785056_190785170_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421_190793455_190794997
ENSMUST00000110893.10	chr1	-	1242	10	FSM	ENSMUSG00000026632.18	ENSMUST00000110893.10	1242	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGATTTGTCTTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	190795129	190778022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_190778518_190781478_190781560_190785056_190785170_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421_190793455_190794997
ENSMUST00000110936.8	chr5	-	2308	15	FSM	ENSMUSG00000036980.14	ENSMUST00000110936.8	2308	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	NA	NA	NA	NA	NA	NA	NA	NA	138185713	138176878	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185652
ENSMUST00000110939.8	chr1	+	4833	8	FSM	ENSMUSG00000026610.14	ENSMUST00000110939.8	4833	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAAGATATAAAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	187341225	187946583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_187341403_187525521_187525610_187775530_187775947_187798537_187798655_187878509_187878621_187882375_187882538_187930772_187931043_187943091
ENSMUST00000110951.8	chr5	+	1098	10	FSM	ENSMUSG00000019494.15	ENSMUST00000110951.8	1098	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAGCCCTTCCAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	138159361	138162240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_138159453_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ENSMUST00000110961.9	chr5	+	2310	5	FSM	ENSMUSG00000037017.16	ENSMUST00000110961.9	2310	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATTTTATTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	138115177	138132527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_138115270_138116097_138116183_138123239_138123953_138124715_138124909_138131300
ENSMUST00000111018.2	chr1	+	823	2	FSM	ENSMUSG00000026511.8	ENSMUST00000111018.2	823	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTTCTTGCCAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	181952301	181959484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_181952541_181958900
ENSMUST00000111035.2	chr5	-	988	1	FSM	ENSMUSG00000029715.6	ENSMUST00000111035.2	988	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTCGAATGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	137500687	137499699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_137499700_137500700
ENSMUST00000111042.3	chr2	+	3905	2	FSM	ENSMUSG00000048482.15	ENSMUST00000111042.3	3905	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTTTTAATGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	109539727	109557352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_109540007_109553726
ENSMUST00000111050.10	chr2	+	3965	2	FSM	ENSMUSG00000048482.15	ENSMUST00000111050.10	3965	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTTTTAATGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	109522780	109557352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_109523120_109553726
ENSMUST00000111068.8	chr1	-	1699	9	FSM	ENSMUSG00000038776.14	ENSMUST00000111068.8	1699	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGGGCCAGATACCTT	NA	NA	NA	NA	NA	NA	NA	NA	180845134	180817118	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_180817546_180817957_180818084_180819497_180819607_180821443_180821611_180822192_180822323_180823513_180823742_180827287_180827469_180829363_180829552_180844991
ENSMUST00000111093.8	chr5	+	1902	6	FSM	ENSMUSG00000001739.15	ENSMUST00000111093.8	1902	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGCTGTCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	136995469	137004712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_136995483_136996697_136997178_137001173_137001339_137003294_137003377_137003463_137003581_137003667
ENSMUST00000111155.2	chr5	+	930	2	FSM	ENSMUSG00000004951.11	ENSMUST00000111155.2	930	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCTGACTCCAGAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	135916871	135918415	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_135917289_135917902
ENSMUST00000111192.3	chr2	-	1305	10	FSM	ENSMUSG00000005087.18	ENSMUST00000111192.3	1305	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTACGCCATTAACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	102731691	102644477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102683359_102683582_102686243_102686313_102691904_102692042_102695625_102695792_102731612
ENSMUST00000111227.2	chr2	+	1857	2	FSM	ENSMUSG00000032864.5	ENSMUST00000111227.2	1857	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2836	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGATTTATTGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	101455090	101461398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_101455216_101459666
ENSMUST00000111228.2	chr1	+	716	5	FSM	ENSMUSG00000026547.16	ENSMUST00000111228.2	716	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATGAATGGTTAATATA	NA	NA	NA	NA	NA	NA	NA	NA	172328818	172334300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_172328882_172332686_172332895_172333327_172333503_172333752_172333856_172334133
ENSMUST00000111240.8	chr2	-	1395	10	FSM	ENSMUSG00000040174.15	ENSMUST00000111240.8	1395	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGAACATGTTTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	93841152	93810894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838472_93838768_93838938_93841027
ENSMUST00000111295.8	chr1	-	1335	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	171173213	171169811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173135
ENSMUST00000111298.6	chr5	+	3570	7	FSM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTGCCGTTTTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	130251175	130272507	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ENSMUST00000111308.8	chr5	-	2038	4	FSM	ENSMUSG00000025534.18	ENSMUST00000111308.8	2038	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	130031706	130027499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_130028911_130029201_130029384_130029597_130029784_130031447
ENSMUST00000111326.8	chr1	-	2753	9	FSM	ENSMUSG00000005674.10	ENSMUST00000111326.8	2753	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTGTTTCACAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	171050017	171045370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048736_171048830_171049140_171049209_171049472_171049723_171049943
ENSMUST00000111327.8	chr1	-	2812	9	FSM	ENSMUSG00000005674.10	ENSMUST00000111327.8	2812	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTGTTTCACAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	171049753	171045370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472
ENSMUST00000111349.9	chr2	+	1993	11	FSM	ENSMUSG00000027257.14	ENSMUST00000111349.9	1993	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGTCTTTTGATAGCC	NA	NA	NA	NA	NA	NA	NA	NA	91087673	91095024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_91087922_91090212_91090273_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
ENSMUST00000111350.10	chr1	-	2311	10	FSM	ENSMUSG00000026670.16	ENSMUST00000111350.10	2311	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATGCATAAAAACAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	170002526	169969506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_169970142_169970965_169971033_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
ENSMUST00000111351.10	chr1	-	2287	11	FSM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTTCTACCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	170002515	169969570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
ENSMUST00000111354.2	chr2	-	1738	10	FSM	ENSMUSG00000002108.11	ENSMUST00000111354.2	1738	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCAGGGTTCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	91025496	91014436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_91014828_91014999_91015095_91015286_91015401_91020529_91020630_91020806_91020987_91021083_91021293_91022133_91022401_91022904_91023088_91023961_91024042_91025377
ENSMUST00000111378.10	chr14	-	795	11	FSM	ENSMUSG00000079197.11	ENSMUST00000111378.10	795	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCTGTGTTGTTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	55828558	55824898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827553_55827951_55827985_55828478
ENSMUST00000111445.10	chr2	+	1450	6	FSM	ENSMUSG00000002104.12	ENSMUST00000111445.10	1450	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	90865964	90876074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_90866334_90866891_90867231_90872198_90872358_90873304_90873404_90875184_90875385_90875790
ENSMUST00000111446.10	chr2	+	1458	7	FSM	ENSMUSG00000002104.12	ENSMUST00000111446.10	1458	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCTAGTGATTCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	90865971	90876071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_90866334_90866891_90867231_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
ENSMUST00000111524.8	chr19	-	1251	7	FSM	ENSMUSG00000025085.17	ENSMUST00000111524.8	1251	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATCAGTGGTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	57303343	57119037	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_57119420_57121293_57121388_57123013_57123141_57140704_57140815_57143583_57143768_57161756_57161892_57303124
ENSMUST00000111544.8	chr19	-	2231	22	FSM	ENSMUSG00000025085.17	ENSMUST00000111544.8	2231	22	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTGGTGCGTAGAACATTA	NA	NA	NA	NA	NA	NA	NA	NA	57185928	57025613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_57025770_57027838_57027920_57028918_57028994_57029846_57029855_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035504_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583_57143768_57161756_57161892_57185730
ENSMUST00000111632.5	chr14	-	2103	15	FSM	ENSMUSG00000004558.16	ENSMUST00000111632.5	2103	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCATTGTTAATCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	52150945	52142739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52150779
ENSMUST00000111658.10	chr19	+	3012	12	FSM	ENSMUSG00000024985.21	ENSMUST00000111658.10	3012	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTCCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55730315	55921147	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55743445_55743515_55806195_55806298_55896854_55896988_55899010_55899102_55900990_55901078_55905770_55905912_55907316_55907477_55907942_55908051_55919865
ENSMUST00000111664.8	chr2	-	1926	7	FSM	ENSMUSG00000050043.17	ENSMUST00000111664.8	1926	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTTGCTGTTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	84508462	84501659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506440_84506502_84508194
ENSMUST00000111668.8	chr5	-	4861	17	FSM	ENSMUSG00000029471.14	ENSMUST00000111668.8	4861	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGGGCCTCTCGGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	122917445	122869232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_122872309_122875050_122875094_122875495_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
ENSMUST00000111702.8	chr6	+	4415	4	FSM	ENSMUSG00000030255.14	ENSMUST00000111702.8	4415	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGGTGTTGAGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	145877366	145910949	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_145877464_145877598_145877736_145901320_145901408_145906855
ENSMUST00000111721.2	chr6	+	1336	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111721.2	1336	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAGGAGTCTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	145156911	145162265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_145156971_145160909_145160998_145161076
ENSMUST00000111726.10	chr6	+	1374	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111726.10	1374	3	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAGGAGTCTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	145156881	145162265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_145156979_145160909_145160998_145161076
ENSMUST00000111729.10	chr5	+	874	4	NNC	ENSMUSG00000029462.19	novel	2716	4	NA	NA	0	-59	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGCATGAAGAGAAAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	122492484	122501274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_122492540_122498091_122498268_122500098_122500335_122500867
ENSMUST00000111755.5	chr7	-	978	2	FSM	ENSMUSG00000091900.4	ENSMUST00000111755.5	978	2	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	2162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCAGGAGCTGGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	115683793	115682601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_115683208_115683421
ENSMUST00000111772.10	chr9	-	2234	14	FSM	ENSMUSG00000039607.18	ENSMUST00000111772.10	2234	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAAGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	117081185	116407093	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_116407771_116411805_116411934_116415085_116415164_116465436_116465548_116507714_116507766_116510198_116510296_116524887_116524935_116548383_116548491_116634480_116634561_116651806_116651965_116788535_116788628_116885804_116885864_116939028_116939187_117080794
ENSMUST00000111807.5	chr19	+	3606	6	FSM	ENSMUSG00000006435.17	ENSMUST00000111807.5	3606	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	47217349	47247874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_47217536_47228240_47228483_47228788_47229111_47241557_47242248_47245150_47245298_47245855
ENSMUST00000111833.3	chr2	-	631	3	FSM	ENSMUSG00000044033.17	ENSMUST00000111833.3	631	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGATTTTGATGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	77000920	76992324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_76992641_76998854_76998978_77000728
ENSMUST00000111909.8	chr6	-	1087	6	FSM	ENSMUSG00000030206.14	ENSMUST00000111909.8	1087	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCTCCTGAGCCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	135231168	135214326	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_135214744_135217070_135217183_135218242_135218396_135219171_135219220_135221078_135221398_135231130
ENSMUST00000111961.8	chr2	+	1734	10	FSM	ENSMUSG00000059005.14	ENSMUST00000111961.8	1734	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	75489623	75496465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75494016_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUST00000111964.8	chr2	+	1654	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAGTTAACACGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	75489604	75496183	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUST00000111973.8	chr5	-	779	5	FSM	ENSMUSG00000032959.13	ENSMUST00000111973.8	779	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTAGGGTGTCTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	117425648	117421203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_117421531_117422128_117422195_117423785_117423887_117424199_117424310_117425473
ENSMUST00000111976.9	chr1	-	4365	22	FSM	ENSMUSG00000026365.16	ENSMUST00000111976.9	4365	22	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTATGTACGTCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	140111149	140013592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_140014261_140016395_140016579_140026607_140026785_140028545_140028723_140029322_140029497_140030074_140030285_140030445_140030623_140033132_140033310_140036229_140036410_140036495_140036679_140040170_140040345_140046324_140046502_140047608_140047792_140063884_140064062_140064433_140064629_140071668_140071843_140075392_140075564_140082206_140082399_140084997_140085075_140090283_140090390_140090688_140090875_140110902
ENSMUST00000111977.8	chr1	-	4100	21	FSM	ENSMUSG00000026365.16	ENSMUST00000111977.8	4100	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGCCTATGTACGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	140111058	140013595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_140014261_140016395_140016579_140026607_140026785_140028545_140028723_140029322_140029497_140030074_140030285_140030445_140030623_140033132_140033310_140036229_140036410_140036495_140036682_140046324_140046502_140047608_140047792_140063884_140064062_140064433_140064629_140071668_140071843_140075392_140075564_140082206_140082399_140084997_140085075_140090283_140090390_140090688_140090875_140110902
ENSMUST00000111996.8	chr2	-	723	5	FSM	ENSMUSG00000018770.10	ENSMUST00000111996.8	723	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	73741669	73738790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741585
ENSMUST00000112025.3	chr1	-	565	3	FSM	ENSMUSG00000079283.3	ENSMUST00000112025.3	565	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTCCACAAGATGCACG	NA	NA	NA	NA	NA	NA	NA	NA	138784590	138779720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_138779912_138781308_138781411_138784318
ENSMUST00000112028.10	chr19	-	3136	12	FSM	ENSMUSG00000025198.17	ENSMUST00000112028.10	3136	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGTGTTCTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	44058224	44023382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058129
ENSMUST00000112053.2	chr9	-	1054	2	FSM	ENSMUSG00000049734.10	ENSMUST00000112053.2	1054	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGACTGCTTGCCGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	108888319	108887005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_108887997_108888256
ENSMUST00000112055.8	chr2	-	1251	7	FSM	ENSMUSG00000027108.16	ENSMUST00000112055.8	1251	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTTGGTGTGTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	73043304	72923545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_72924069_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203
ENSMUST00000112085.9	chr1	+	1076	14	FSM	ENSMUSG00000026414.14	ENSMUST00000112085.9	1076	14	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATGGAATAGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	135768612	135779998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_135768651_135773244_135773258_135773282_135773383_135773635_135773672_135774459_135774494_135775446_135775511_135775718_135775836_135776548_135776627_135777087_135777199_135778116_135778126_135778448_135778559_135779089_135779181_135779433_135779475_135779764
ENSMUST00000112087.9	chr1	+	1112	15	FSM	ENSMUSG00000026414.14	ENSMUST00000112087.9	1112	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATGGAATAGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	135768594	135779998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_135768651_135769638_135769650_135771522_135771553_135773292_135773383_135773635_135773672_135774459_135774494_135775446_135775511_135775718_135775836_135776548_135776627_135777087_135777199_135778116_135778126_135778448_135778559_135779089_135779181_135779433_135779475_135779764
ENSMUST00000112091.9	chrX	-	1447	3	FSM	ENSMUSG00000079316.11	ENSMUST00000112091.9	1447	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTTGCAATGCTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	165262863	165240248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_165241340_165245310_165245339_165262535
ENSMUST00000112136.2	chr2	+	2548	18	FSM	ENSMUSG00000027012.16	ENSMUST00000112136.2	2548	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCACTTTTACTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	71042335	71093647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058170_71058189_71058943_71059035_71063992_71064053_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092994
ENSMUST00000112138.8	chr2	+	2466	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112138.8	2466	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTCTCAAATTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	71042101	71093635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUST00000112139.8	chr2	+	2483	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112139.8	2483	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCAAATTTTCACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	71042084	71093638	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092994
ENSMUST00000112142.8	chr2	+	2585	17	FSM	ENSMUSG00000027012.16	ENSMUST00000112142.8	2585	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTTTCACTTTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	71042049	71093642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71063992_71064053_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUST00000112151.2	chr6	-	1108	3	FSM	ENSMUSG00000048668.17	ENSMUST00000112151.2	1108	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGCAGCCTCGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	128339831	128334327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_128335157_128336068_128336318_128339801
ENSMUST00000112176.8	chrX	-	698	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112176.8	698	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTGTGTCTGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	165992145	165990090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_165990532_165990932_165991048_165992003
ENSMUST00000112192.8	chrX	+	1294	4	FSM	ENSMUSG00000079317.11	ENSMUST00000112192.8	1294	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTGGTCATTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	165223771	165236134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_165223836_165229786_165229899_165232783_165232900_165235132
ENSMUST00000112205.2	chr2	+	1196	9	FSM	ENSMUSG00000014959.13	ENSMUST00000112205.2	1196	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGAGGCCTCCCGTTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	70491933	70519704	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526
ENSMUST00000112210.11	chr14	-	2777	18	FSM	ENSMUSG00000021948.18	ENSMUST00000112210.11	2777	18	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTGGGGACATTTA	NA	NA	NA	NA	NA	NA	NA	NA	30348167	30317310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
ENSMUST00000112221.8	chr6	-	1871	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	126916550	126900377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ENSMUST00000112311.8	chr5	+	1395	4	FSM	ENSMUSG00000025825.13	ENSMUST00000112311.8	1395	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGAAGCTGTCTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	113910863	113915859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831
ENSMUST00000112315.2	chrX	-	2525	6	FSM	ENSMUSG00000038344.15	ENSMUST00000112315.2	2525	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTATGTCTCATCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	161612450	161571913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
ENSMUST00000112320.8	chr2	-	1527	7	FSM	ENSMUSG00000005233.17	ENSMUST00000112320.8	1527	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	69036479	69024238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036173
ENSMUST00000112376.2	chrX	+	2310	15	FSM	ENSMUSG00000031295.14	ENSMUST00000112376.2	2310	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATATGTCACTTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	159285460	159341951	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462
ENSMUST00000112384.10	chr14	+	468	5	FSM	ENSMUSG00000025290.18	ENSMUST00000112384.10	468	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGATTGGATACAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	24540748	24545500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545497
ENSMUST00000112386.8	chr1	+	1202	5	FSM	ENSMUSG00000026433.14	ENSMUST00000112386.8	1202	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCATCTGCGTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	131794961	131800477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
ENSMUST00000112391.8	chr19	+	1293	5	FSM	ENSMUSG00000023307.15	ENSMUST00000112391.8	1293	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACTGTTTCCTGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	37184966	37198475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037
ENSMUST00000112439.9	chr6	-	1328	8	FSM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGTATGCCAGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	124942501	124935375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ENSMUST00000112453.9	chrX	+	2515	14	FSM	ENSMUSG00000040990.18	ENSMUST00000112453.9	2515	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGGGGGGGAATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	158623476	158757163	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_158623608_158624071_158624183_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUST00000112487.3	chr17	-	2041	9	FSM	ENSMUSG00000056121.17	ENSMUST00000112487.3	2041	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGAGTCTTGAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78725581	78685313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_78686175_78689036_78689103_78692172_78692249_78694419_78694501_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
ENSMUST00000112495.8	chr2	+	2039	8	FSM	ENSMUSG00000064289.16	ENSMUST00000112495.8	2039	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTCTGATGGGATTTA	NA	NA	NA	NA	NA	NA	NA	NA	61423420	61484515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_61423553_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
ENSMUST00000112505.9	chr5	-	2098	6	FSM	ENSMUSG00000029500.17	ENSMUST00000112505.9	2098	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGTTTAGAAACCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	110417779	110406995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_110408304_110413377_110413512_110413605_110413695_110413776_110413903_110414952_110415132_110417517
ENSMUST00000112540.8	chr5	+	2081	4	FSM	ENSMUSG00000066613.15	ENSMUST00000112540.8	2081	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTCATGGTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	110144386	110158277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497
ENSMUST00000112551.4	chrX	-	896	6	FSM	ENSMUSG00000025283.16	ENSMUST00000112551.4	896	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAGGCAGAATTCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	153999341	153996310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_153996664_153996892_153996955_153997028_153997131_153998596_153998681_153998780_153998833_153999098
ENSMUST00000112585.8	chr6	-	2127	8	FSM	ENSMUSG00000040613.15	ENSMUST00000112585.8	2127	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTGTTTTTGTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	122579330	122554759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122568045_122568164_122573590_122573737_122577016_122577085_122579215
ENSMUST00000112586.8	chr6	-	2265	8	FSM	ENSMUSG00000040613.15	ENSMUST00000112586.8	2265	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTTGTGGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	122579403	122554750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122568045_122568220_122573590_122573737_122577016_122577085_122579215
ENSMUST00000112617.4	chrX	+	992	6	FSM	ENSMUSG00000025260.11	ENSMUST00000112617.4	992	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGCAGTCTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	150784840	150787438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_150784931_150785273_150785439_150786356_150786522_150786618_150786778_150786857_150786967_150787134
ENSMUST00000112640.8	chr1	-	2752	5	FSM	ENSMUSG00000026389.17	ENSMUST00000112640.8	2752	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACAATAGTTAAAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	120193014	120154152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120192961
ENSMUST00000112700.8	chrX	-	2107	13	FSM	ENSMUSG00000025268.16	ENSMUST00000112700.8	2107	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	149596703	149589416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149596611
ENSMUST00000112721.10	chrX	-	1852	6	FSM	ENSMUSG00000025269.17	ENSMUST00000112721.10	1852	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATGTTGAGTGGATAT	NA	NA	NA	NA	NA	NA	NA	NA	149371092	149354503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369063_149370038_149370123_149370918
ENSMUST00000112748.8	chr5	+	1456	7	FSM	ENSMUSG00000029304.15	ENSMUST00000112748.8	1456	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGTCTGGTGGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	104582986	104588913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_104583115_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUST00000112861.8	chr6	+	1202	4	FSM	ENSMUSG00000059689.16	ENSMUST00000112861.8	1202	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTATTTTTCATAATTT	NA	NA	NA	NA	NA	NA	NA	NA	117818206	117822917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_117818230_117818968_117819076_117820213_117820354_117821985
ENSMUST00000112862.7	chr2	+	1339	4	FSM	ENSMUSG00000026755.15	ENSMUST00000112862.7	1339	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGGCTTCAAAAGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	38898087	38905889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_38898357_38903126_38903200_38903734_38903912_38905069
ENSMUST00000112890.3	chr1	-	1055	2	FSM	ENSMUSG00000026281.16	ENSMUST00000112890.3	1055	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCCGGCTTGTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	93729628	93727786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_93728633_93729419
ENSMUST00000112893.2	chr1	-	1040	3	FSM	ENSMUSG00000026281.16	ENSMUST00000112893.2	1040	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCTCTCATAACCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	93726723	93720445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_93720666_93722447_93722646_93726101
ENSMUST00000112898.8	chr5	+	460	5	FSM	ENSMUSG00000016833.15	ENSMUST00000112898.8	460	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAACTAATTTGAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	100946602	100952327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100951835_100951896_100952197
ENSMUST00000112999.8	chr1	-	653	3	FSM	ENSMUSG00000073616.11	ENSMUST00000112999.8	653	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGCTTTTAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	92568286	92564866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_92565126_92567408_92567482_92567965
ENSMUST00000113038.8	chr17	+	3483	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113038.8	3483	17	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	56610399	56630486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUST00000113039.9	chr17	+	3391	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	56611347	56630486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUST00000113042.3	chrX	+	4182	4	FSM	ENSMUSG00000042515.14	ENSMUST00000113042.3	4182	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTGTATTATTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	138117914	138139084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_138117964_138132034_138132164_138134427_138134595_138135247
ENSMUST00000113043.8	chrX	+	4600	7	FSM	ENSMUSG00000042515.14	ENSMUST00000113043.8	4600	7	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTTGTATTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	138110790	138139082	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_138110967_138111487_138111556_138112107_138112185_138113839_138113988_138132034_138132164_138134427_138134595_138135247
ENSMUST00000113097.8	chrX	-	1825	4	FSM	ENSMUSG00000031422.17	ENSMUST00000113097.8	1825	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	135644439	135633690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135644341
ENSMUST00000113112.2	chrX	+	826	3	FSM	ENSMUSG00000046432.13	ENSMUST00000113112.2	826	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGCCACAAGAACTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	135171053	135172713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_135171151_135171558_135171632_135172057
ENSMUST00000113113.2	chrX	+	766	2	FSM	ENSMUSG00000046432.13	ENSMUST00000113113.2	766	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTGTCCTTAAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	135171523	135172669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_135171632_135172011
ENSMUST00000113123.8	chr2	+	1530	11	FSM	ENSMUSG00000038696.15	ENSMUST00000113123.8	1530	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCACAGCCCAGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	34296897	34513576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_34297102_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ENSMUST00000113198.8	chrX	+	2085	4	FSM	ENSMUSG00000033460.15	ENSMUST00000113198.8	2085	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAAAGCACTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	133618761	133622657	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_133618800_133619668_133619742_133620375_133620475_133620782
ENSMUST00000113203.2	chrX	+	2315	2	FSM	ENSMUSG00000045427.14	ENSMUST00000113203.2	2315	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	133501973	133507809	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_133502083_133505603
ENSMUST00000113211.8	chrX	+	483	5	FSM	ENSMUSG00000079435.10	ENSMUST00000113211.8	483	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTTTTTCTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	133486402	133488805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_133486469_133486826_133486933_133487259_133487328_133488199_133488323_133488685
ENSMUST00000113231.4	chr1	+	1119	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCATGCTCTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	87142007	87155786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ENSMUST00000113248.4	chr6	+	1398	9	FSM	ENSMUSG00000013736.17	ENSMUST00000113248.4	1398	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAAAACTAAATGAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	106746126	106758615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_106746153_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ENSMUST00000113277.8	chr2	+	2063	7	FSM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAAGTGAGTGTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	32515448	32525066	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32515551_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUST00000113278.9	chr2	+	2085	7	FSM	ENSMUSG00000026817.15	ENSMUST00000113278.9	2085	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGAGTGTATTGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	32511769	32525070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32511890_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUST00000113301.2	chr17	-	594	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113301.2	594	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTATTTTATTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	47998993	47997664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_47997988_47998112_47998214_47998823
ENSMUST00000113309.9	chr1	+	3555	25	FSM	ENSMUSG00000062590.14	ENSMUST00000113309.9	3555	25	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCTCAGTTGTCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	86082519	86204419	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947_86185085_86189760_86189888_86202104_86202278_86203381
ENSMUST00000113377.8	chr2	+	4361	26	FSM	ENSMUSG00000002546.18	ENSMUST00000239447.2	4361	26	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGGGTGTTCGTCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	32178264	32197933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ENSMUST00000113395.8	chr2	-	712	4	FSM	ENSMUSG00000044627.12	ENSMUST00000113395.8	712	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	32172876	32168827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32172700
ENSMUST00000113400.3	chr2	-	522	5	FSM	ENSMUSG00000044627.12	ENSMUST00000113400.3	522	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATTGGGAGGGGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	32178081	32168929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32178042
ENSMUST00000113423.10	chr19	+	990	4	FSM	ENSMUSG00000024959.15	ENSMUST00000113423.10	990	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGCCTCTATCCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	6919868	6929261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6919993_6920234_6920415_6928007_6928199_6928766
ENSMUST00000113502.10	chr19	+	2652	10	FSM	ENSMUSG00000024947.18	ENSMUST00000113502.10	2652	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAGAGAGATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	6385008	6390910	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6385101_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ENSMUST00000113504.10	chr19	+	2663	10	FSM	ENSMUSG00000024947.18	ENSMUST00000113504.10	2663	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGTATGTATGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	6385008	6390921	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6385101_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ENSMUST00000113507.8	chr5	+	1358	6	FSM	ENSMUSG00000029233.16	ENSMUST00000113507.8	1358	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATATGAATGTACAG	NA	NA	NA	NA	NA	NA	NA	NA	76294483	76303091	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_76294608_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369
ENSMUST00000113584.8	chr1	+	1692	14	FSM	ENSMUSG00000033021.17	ENSMUST00000113584.8	1692	14	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	2636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	75412586	75419817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_75412656_75412789_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ENSMUST00000113596.8	chr6	-	1657	8	FSM	ENSMUSG00000079477.10	ENSMUST00000113596.8	1657	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTGGATTGTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	88022227	87976786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_87991567_87991703_87992613_87992701_88022054
ENSMUST00000113597.8	chr6	-	1859	7	FSM	ENSMUSG00000079477.10	ENSMUST00000113597.8	1859	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCACTATCCTACTC	NA	NA	NA	NA	NA	NA	NA	NA	87996765	87976424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_87992613_87992701_87996617
ENSMUST00000113598.8	chr6	-	2031	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113598.8	2031	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGAACAGCTGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	88021999	87976098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88021918
ENSMUST00000113600.10	chr6	-	2159	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113600.10	2159	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTGTCTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	88022252	87976087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
ENSMUST00000113619.8	chr6	-	1661	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	87828062	87820063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
ENSMUST00000113621.10	chr2	-	1851	13	FSM	ENSMUSG00000026860.17	ENSMUST00000113621.10	1851	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	30249344	30234822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_30235440_30235710_30235952_30236070_30236086_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30239237_30239250_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUST00000113643.8	chr2	+	1195	10	FSM	ENSMUSG00000079484.13	ENSMUST00000113643.8	1195	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAAATATATTTTATATG	NA	NA	NA	NA	NA	NA	NA	NA	30156860	30172149	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
ENSMUST00000113645.8	chr2	+	1325	12	FSM	ENSMUSG00000079484.13	ENSMUST00000113645.8	1325	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATATGTACGGGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	30156732	30172160	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_30156803_30156874_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
ENSMUST00000113662.8	chr2	-	1850	13	FSM	ENSMUSG00000039648.15	ENSMUST00000113662.8	1850	13	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	30095787	30075137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084173_30095644
ENSMUST00000113669.9	chr17	-	742	4	FSM	ENSMUSG00000036315.14	ENSMUST00000113669.9	742	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGATGTTATGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37269374	37265247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040
ENSMUST00000113674.8	chr19	-	939	7	FSM	ENSMUSG00000024914.17	ENSMUST00000113674.8	939	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	5474949	5472854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5473054_5473358_5473448_5473587_5473703_5473799_5473920_5474209_5474304_5474388_5474462_5474700
ENSMUST00000113682.9	chr15	+	1480	7	FSM	ENSMUSG00000001285.13	ENSMUST00000113682.9	1480	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCTAGGAGTACATAAC	NA	NA	NA	NA	NA	NA	NA	NA	102240143	102246574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ENSMUST00000113687.8	chr9	-	962	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113687.8	962	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGTACGCTATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	66956425	66935270	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66935450_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUST00000113693.8	chr9	-	1054	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113693.8	1054	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGTTTTTACAATATAT	NA	NA	NA	NA	NA	NA	NA	NA	66956454	66931605	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66931848_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUST00000113701.8	chr9	-	1677	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113701.8	1677	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGACATTTTCTAAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	66956483	66929887	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66955405_66955532_66956300
ENSMUST00000113705.8	chr9	-	1759	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113705.8	1759	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGTCCTGTCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	66956549	66929871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955405_66955532_66956300
ENSMUST00000113707.9	chr9	-	1898	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113707.9	1898	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGTCCTGTCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	66956688	66929871	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUST00000113721.8	chr1	-	1451	10	FSM	ENSMUSG00000026171.13	ENSMUST00000113721.8	1451	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGCCTATGTGGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	74640536	74632911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_74633562_74633718_74633854_74634367_74634458_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
ENSMUST00000113820.9	chr1	+	1439	11	FSM	ENSMUSG00000006304.15	ENSMUST00000113820.9	1439	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATTTGTTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	74275655	74307368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ENSMUST00000113851.8	chr6	+	1323	10	FSM	ENSMUSG00000034744.14	ENSMUST00000113851.8	1323	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGGGTGTCATCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	83772009	83779536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_83772231_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUST00000113888.3	chr6	-	1007	6	FSM	ENSMUSG00000014554.14	ENSMUST00000113888.3	1007	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGTTCGTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	83483951	83457198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_83457419_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
ENSMUST00000113895.2	chrX	+	1173	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113895.2	1173	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCTGCTTTCTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	93410788	93460699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_93411092_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
ENSMUST00000113896.8	chrX	+	1032	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113896.8	1032	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCTGCTTTCTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	93410770	93460699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_93410933_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
ENSMUST00000113897.9	chrX	+	1218	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113897.9	1218	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCTGCTTTCTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	93410759	93460699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_93411108_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
ENSMUST00000113904.9	chr5	+	2485	13	FSM	ENSMUSG00000029179.15	ENSMUST00000113904.9	2485	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCAGTTGTTATTCC	NA	NA	NA	NA	NA	NA	NA	NA	52940395	52982007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
ENSMUST00000113906.9	chr16	-	745	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113906.9	745	5	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGTAGATCTATATGT	NA	NA	NA	NA	NA	NA	NA	NA	94171571	94165305	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171463
ENSMUST00000113938.5	chr6	+	695	3	FSM	ENSMUSG00000030037.10	ENSMUST00000113938.5	695	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTTTCTCAGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	83086020	83086920	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_83086185_83086294_83086408_83086502
ENSMUST00000113980.4	chr6	+	1945	10	FSM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTTCAGAGCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	82923882	83007164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
ENSMUST00000114004.8	chr2	+	2194	3	FSM	ENSMUSG00000015488.15	ENSMUST00000114004.8	2194	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTTCCCATTCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	26899937	26907436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_26900118_26904104_26904178_26905495
ENSMUST00000114005.9	chr2	+	1286	4	FSM	ENSMUSG00000015488.15	ENSMUST00000114005.9	1286	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTACCTGTTCATCTATT	NA	NA	NA	NA	NA	NA	NA	NA	26899937	26906861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_26900118_26904104_26904178_26905495_26905622_26905954
ENSMUST00000114023.3	chr16	-	1154	10	FSM	ENSMUSG00000058240.15	ENSMUST00000114023.3	1154	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTTTCTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	91525589	91491225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_91491554_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUST00000114048.2	chr6	-	623	4	FSM	ENSMUSG00000079523.9	ENSMUST00000114048.2	623	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGGCATGGTTGGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	72935731	72934343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_72934636_72934895_72935008_72935319_72935369_72935561
ENSMUST00000114050.8	chr6	-	570	3	FSM	ENSMUSG00000079523.9	ENSMUST00000114050.8	570	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGGTCTGAATTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	72935471	72934329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_72934636_72934895_72935008_72935319
ENSMUST00000114070.10	chrX	+	632	5	FSM	ENSMUSG00000031197.12	ENSMUST00000114070.10	632	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTCCTTATTAGAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	74557904	74567652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74567441
ENSMUST00000114071.8	chr6	+	1400	10	FSM	ENSMUSG00000056737.15	ENSMUST00000114071.8	1400	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTGGCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	72526255	72539966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_72526485_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ENSMUST00000114102.10	chr2	-	2193	10	FSM	ENSMUSG00000026927.18	ENSMUST00000114102.10	2193	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	26279328	26272813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26278927_26279078_26279160
ENSMUST00000114106.8	chr5	+	1504	9	FSM	ENSMUSG00000067367.10	ENSMUST00000114106.8	1504	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTGTATCTATGATAA	NA	NA	NA	NA	NA	NA	NA	NA	38378021	38391640	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_38378139_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ENSMUST00000114127.8	chrX	+	3332	10	FSM	ENSMUSG00000004221.17	ENSMUST00000114127.8	3332	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGGGGGTTTGGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	73473276	73493892	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ENSMUST00000114134.9	chr2	+	2043	5	FSM	ENSMUSG00000026930.16	ENSMUST00000114134.9	2043	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTGTTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	26220402	26238249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_26220578_26229647_26229719_26234613_26234771_26235162_26235372_26236818
ENSMUST00000114146.8	chrX	-	1902	3	FSM	ENSMUSG00000032806.14	ENSMUST00000114146.8	1902	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCTCGGGTCCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	73416852	73412822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_73414618_73416219_73416289_73416814
ENSMUST00000114152.2	chrX	-	746	3	FSM	ENSMUSG00000015289.5	ENSMUST00000114152.2	746	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCAGCCTCTAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	73397181	73395767	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_73396105_73396450_73396609_73396930
ENSMUST00000114158.9	chr5	+	3051	14	FSM	ENSMUSG00000029121.17	ENSMUST00000114158.9	3051	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGGGTGTTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	37399423	37449477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_37399870_37422575_37422665_37426026_37426212_37430690_37430856_37433620_37433683_37435428_37435510_37436206_37436276_37437002_37437124_37437810_37437968_37440195_37440338_37441371_37441543_37443711_37443892_37446148_37446315_37448460
ENSMUST00000114160.2	chrX	+	1383	13	FSM	ENSMUSG00000001962.9	ENSMUST00000114160.2	1383	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGAACCTGCGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73356638	73363755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ENSMUST00000114178.8	chr6	+	3431	4	FSM	ENSMUSG00000052656.13	ENSMUST00000114178.8	3431	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGTAGGTTTCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	71470893	71487865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_71471873_71473814_71473955_71482717_71482834_71485669
ENSMUST00000114180.11	chrX	+	1786	10	FSM	ENSMUSG00000009995.18	ENSMUST00000114180.11	1786	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	73326367	73333754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332053_73332120_73332267_73332321_73332710_73332789_73332904
ENSMUST00000114191.8	chr16	-	742	6	FSM	ENSMUSG00000022890.14	ENSMUST00000114191.8	742	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	84632391	84624758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_84624884_84625312_84625438_84628216_84628396_84630707_84630763_84631696_84631872_84632308
ENSMUST00000114218.2	chr16	-	1271	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGGTTACTCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	78373545	78341848	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
ENSMUST00000114228.8	chr6	+	748	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCACTTCAGTCAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	66873406	66994913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
ENSMUST00000114234.2	chr2	-	2151	11	FSM	ENSMUSG00000026942.14	ENSMUST00000114234.2	2151	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGTGGTGTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	25436922	25408877	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428856_25429097_25436873
ENSMUST00000114276.3	chr9	+	2024	7	FSM	ENSMUSG00000032320.8	ENSMUST00000114276.3	2024	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTGCACCTGAGACATTT	NA	NA	NA	NA	NA	NA	NA	NA	55949140	55966361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
ENSMUST00000114283.8	chr5	+	2628	15	FSM	ENSMUSG00000029101.17	ENSMUST00000114283.8	2628	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGCCATGTACTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	35156527	35196979	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811_35187966_35189214_35189779_35196506
ENSMUST00000114329.8	chr5	-	1906	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114329.8	1906	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	34794536	34790992	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794270
ENSMUST00000114371.5	chr16	-	1150	10	FSM	ENSMUSG00000022748.9	ENSMUST00000114371.5	1150	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACAGTTTCTCTTTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	57427209	57122362	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_57122646_57124042_57124132_57127188_57127277_57127731_57127793_57131615_57131719_57133020_57133081_57136524_57136655_57138268_57138344_57143826_57143907_57427028
ENSMUST00000114387.8	chrX	-	979	8	FSM	ENSMUSG00000031388.15	ENSMUST00000114387.8	979	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAATGTGCATAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	72965494	72960492	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_72960889_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ENSMUST00000114389.10	chrX	-	1031	8	FSM	ENSMUSG00000031388.15	ENSMUST00000114389.10	1031	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGGGGTATGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	72965530	72960480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_72960893_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ENSMUST00000114444.9	chr16	-	2295	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55850102	55835868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
ENSMUST00000114445.8	chr6	+	1585	5	FSM	ENSMUSG00000029836.16	ENSMUST00000114445.8	1585	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	51447645	51460684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_51447715_51448795_51448849_51452210_51452354_51458703_51458799_51459459
ENSMUST00000114446.8	chr6	+	1719	6	FSM	ENSMUSG00000029836.16	ENSMUST00000114446.8	1719	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	51447674	51460684	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_51447715_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ENSMUST00000114473.8	chrX	-	1492	12	FSM	ENSMUSG00000002012.14	ENSMUST00000114473.8	1492	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGTGCTGAACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	72703330	72699599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703272
ENSMUST00000114496.3	chr16	+	1175	10	FSM	ENSMUSG00000055447.20	ENSMUST00000114496.3	1175	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATTTTTCTATTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	49675728	49731454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_49675761_49688127_49688476_49689380_49689444_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
ENSMUST00000114551.10	chrX	-	1286	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTTGTGGATTTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	71962017	71957137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
ENSMUST00000114582.9	chrX	+	1743	5	FSM	ENSMUSG00000015217.12	ENSMUST00000114582.9	1743	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCACCAGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	70599533	70604282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_70599797_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ENSMUST00000114606.8	chr2	+	5284	13	FSM	ENSMUSG00000036617.18	ENSMUST00000114606.8	5284	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTACCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	20742124	20815165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_20742367_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712
ENSMUST00000114709.3	chr1	+	3570	10	FSM	ENSMUSG00000041684.12	ENSMUST00000114709.3	3570	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTTTGTGGTTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	44159127	44183930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ENSMUST00000114753.8	chr2	-	993	7	FSM	ENSMUSG00000063275.16	ENSMUST00000114753.8	993	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGCATTGTTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	14060831	14031641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_14031818_14040589_14040769_14045644_14045767_14049593_14049683_14049758_14049778_14049948_14050067_14060541
ENSMUST00000114765.4	chr1	+	2716	5	FSM	ENSMUSG00000079588.4	ENSMUST00000114765.4	2716	5	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTTGCCCTTATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	40844760	40896047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_40845048_40845258_40845359_40846781_40846881_40877457_40877596_40893955
ENSMUST00000114786.8	chr5	+	2048	16	FSM	ENSMUSG00000059447.14	ENSMUST00000114786.8	2048	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCGTAGTCTCGTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	30360269	30389587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_30360381_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUST00000114795.3	chr1	+	4832	11	FSM	ENSMUSG00000026072.13	ENSMUST00000114795.3	4832	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTGCTCTGTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	40305745	40355361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_40306042_40321392_40321457_40332279_40332518_40332617_40332808_40333917_40334087_40337068_40337135_40339919_40340038_40341437_40341590_40349445_40349590_40351506_40351675_40352134
ENSMUST00000114797.2	chr6	-	500	3	FSM	ENSMUSG00000029918.10	ENSMUST00000114797.2	500	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTGTTTAAGATTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	39787819	39779125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_39779479_39782420_39782546_39787797
ENSMUST00000114819.8	chr16	+	2797	14	FSM	ENSMUSG00000022837.15	ENSMUST00000114819.8	2797	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGTTATTTCAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	36648768	36693083	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812
ENSMUST00000114822.2	chr6	-	751	3	FSM	ENSMUSG00000029922.16	ENSMUST00000114822.2	751	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCCGAATGCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	39397232	39382472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_39382895_39387021_39387151_39397032
ENSMUST00000114839.8	chr5	+	1605	8	FSM	ENSMUSG00000029131.15	ENSMUST00000114839.8	1605	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTCTTGTGTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	29940937	29972101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
ENSMUST00000114881.9	chr17	-	644	6	FSM	ENSMUSG00000052146.17	ENSMUST00000114881.9	644	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCCACTTGTGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	27855643	27849397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27855538
ENSMUST00000114893.8	chrX	-	2671	11	FSM	ENSMUSG00000031111.17	ENSMUST00000114893.8	2671	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTAGTGGTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	48877120	48871412	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_48871830_48871976_48872101_48872488_48872768_48872898_48873187_48873382_48873671_48873848_48874137_48874864_48875153_48875735_48876015_48876234_48876526_48876909_48876943_48877024
ENSMUST00000114897.9	chr2	-	1166	10	FSM	ENSMUSG00000025781.15	ENSMUST00000114897.9	1166	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	10085321	10060840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUST00000114911.8	chrX	-	2623	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114911.8	2623	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACCCATCTGTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	48377119	48099893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48112003_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375732_48375782_48376977
ENSMUST00000114925.10	chr1	+	1094	6	FSM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGACTGTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	37469219	37478065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
ENSMUST00000114935.9	chr17	-	662	6	FSM	ENSMUSG00000024194.17	ENSMUST00000114935.9	662	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	27158517	27156946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158424
ENSMUST00000114936.8	chrX	+	1582	11	FSM	ENSMUSG00000031105.17	ENSMUST00000114936.8	1582	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGACTTTGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	47712641	47751171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_47712706_47712838_47713084_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ENSMUST00000114996.8	chr2	-	2614	14	FSM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	5068856	5025452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ENSMUST00000115078.8	chr16	+	500	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115078.8	500	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	32876896	32880535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_32876988_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ENSMUST00000115079.8	chr16	+	510	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115079.8	510	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCCTAAATTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	32876835	32880546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_32876926_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ENSMUST00000115120.9	chr16	+	2796	7	FSM	ENSMUSG00000022791.20	ENSMUST00000115120.9	2796	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	32491971	32502311	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_32492099_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ENSMUST00000115174.4	chr1	+	4218	8	FSM	ENSMUSG00000004768.15	ENSMUST00000115174.4	4218	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAATTGTGTGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	33759487	33781642	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_33759666_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ENSMUST00000115193.8	chr5	-	2416	16	FSM	ENSMUSG00000029014.15	ENSMUST00000115193.8	2416	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGGAATTATAGTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	21990182	21962269	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ENSMUST00000115195.8	chr5	-	1994	17	FSM	ENSMUSG00000029014.15	ENSMUST00000115195.8	1994	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTCACTTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	21990214	21962279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988147_21989986
ENSMUST00000115246.9	chr18	+	1484	10	FSM	ENSMUSG00000024576.15	ENSMUST00000115246.9	1484	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTATTGTAACTTAT	NA	NA	NA	NA	NA	NA	NA	NA	61688388	61715187	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61715106
ENSMUST00000115249.10	chrX	-	1145	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115249.10	1145	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTACAGAGTCGGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	36127891	36087389	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_36087823_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ENSMUST00000115331.10	chr9	+	1983	18	FSM	ENSMUSG00000003402.15	ENSMUST00000115331.10	1983	18	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGGCTGTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	21914361	21925516	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ENSMUST00000115338.8	chr16	-	1279	10	FSM	ENSMUSG00000022881.16	ENSMUST00000115338.8	1279	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAGTGAATATACAAT	NA	NA	NA	NA	NA	NA	NA	NA	22946467	22932700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ENSMUST00000115342.10	chrX	+	883	6	FSM	ENSMUSG00000001131.12	ENSMUST00000115342.10	883	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	20736404	20740972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_20736564_20737272_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
ENSMUST00000115414.3	chr9	+	3606	18	FSM	ENSMUSG00000032178.15	ENSMUST00000115414.3	3606	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTTGAGTCTTCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	21279298	21313099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ENSMUST00000115419.8	chr6	+	2194	16	FSM	ENSMUSG00000029534.18	ENSMUST00000115419.8	2194	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTGTCGTCTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	17693992	17943021	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17850355_17850425_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922124_17930764_17930858_17934117_17934258_17942668
ENSMUST00000115437.4	chr16	-	2416	6	FSM	ENSMUSG00000022847.16	ENSMUST00000115437.4	2416	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACCCGAGTCTCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	20553261	20543203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_20544833_20545055_20545224_20547131_20547219_20547468_20547597_20547813_20547968_20553011
ENSMUST00000115467.11	chr6	+	2440	7	FSM	ENSMUSG00000029552.20	ENSMUST00000115467.11	2440	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGTCTTTCTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	17065147	17105822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_17065313_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280_17100440_17104591
ENSMUST00000115490.9	chr17	-	1431	14	FSM	ENSMUSG00000041319.15	ENSMUST00000115490.9	1431	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTGCATTTTATTCC	NA	NA	NA	NA	NA	NA	NA	NA	23892845	23887592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892814
ENSMUST00000115567.8	chr18	-	6436	9	FSM	ENSMUSG00000024431.16	ENSMUST00000115567.8	6436	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTTCATAGAACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	39623727	39543597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39623620
ENSMUST00000115571.8	chr18	-	6327	8	FSM	ENSMUSG00000024431.16	ENSMUST00000115571.8	6327	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTTTTCATAGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	39620298	39543599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050
ENSMUST00000115577.9	chr6	-	1776	12	FSM	ENSMUSG00000004631.16	ENSMUST00000115577.9	1776	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGTAAAATTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	4747176	4674349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_4674633_4678066_4678111_4689578_4689768_4690468_4690496_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4719373_4719497_4730005_4730114_4746979
ENSMUST00000115579.8	chr6	-	1696	11	FSM	ENSMUSG00000004631.16	ENSMUST00000115579.8	1696	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGTAAAATTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	4747204	4674349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_4674633_4678066_4678111_4689578_4689768_4690468_4690496_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4719373_4719497_4746979
ENSMUST00000115605.8	chr16	+	1800	17	NNC	ENSMUSG00000075704.18	novel	1905	18	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTCTGCGTGTGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	18245190	18297821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_18245310_18248560_18248627_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262025_18272470_18272491_18273238_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296422_18296608_18297607
ENSMUST00000115606.9	chr16	+	1905	18	FSM	ENSMUSG00000075704.18	ENSMUST00000115606.9	1905	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCGTGTGCTGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	18245166	18297823	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262025_18272470_18272491_18273238_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
ENSMUST00000115615.9	chrX	-	1183	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115615.9	1183	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGATAATGCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8011962	8008599	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUST00000115616.8	chrX	-	1225	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115616.8	1225	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATCAATACTGATAATG	NA	NA	NA	NA	NA	NA	NA	NA	8012012	8008606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_8009195_8009489_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUST00000115617.10	chrX	-	1152	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115617.10	1152	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATCAATACTGATAATG	NA	NA	NA	NA	NA	NA	NA	NA	8011935	8008606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_8009195_8009485_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUST00000115637.8	chrX	-	2778	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTGAGATTTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	7940497	7927673	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940354
ENSMUST00000115645.10	chr16	-	1085	6	FSM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTGACAAGGCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	18066596	18057647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ENSMUST00000115655.8	chrX	-	1148	7	FSM	ENSMUSG00000031157.11	ENSMUST00000115655.8	1148	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTGTTGTTTGTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	7765218	7760821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765009
ENSMUST00000115663.10	chrX	+	1527	5	FSM	ENSMUSG00000031156.19	ENSMUST00000115663.10	1527	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGTTGGAAAGCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	7750482	7760703	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758378_7759107_7760429
ENSMUST00000115679.8	chrX	+	3239	10	FSM	ENSMUSG00000000134.18	ENSMUST00000115679.8	3239	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	7628914	7641440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_7629300_7631745_7631860_7632812_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUST00000115688.8	chrX	+	1510	11	FSM	ENSMUSG00000039382.13	ENSMUST00000115688.8	1510	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCATTTATGACTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	7588488	7594421	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593450_7593511_7593585_7593732_7593988
ENSMUST00000115689.10	chrX	+	1568	11	FSM	ENSMUSG00000039382.13	ENSMUST00000115689.10	1568	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAAGGGTGGGGCGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	7588487	7594440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_7588618_7590091_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ENSMUST00000115765.2	chr18	-	3869	21	FSM	ENSMUSG00000003778.15	ENSMUST00000115765.2	3869	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAAAGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	34757654	34734227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ENSMUST00000115777.10	chr16	-	4207	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTTGTGTGTGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	15412388	15370540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ENSMUST00000115802.2	chr16	-	2466	14	FSM	ENSMUSG00000022680.15	ENSMUST00000115802.2	2466	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGCACTAATAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	13720995	13667140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_13668271_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ENSMUST00000115854.4	chr16	+	2505	11	FSM	ENSMUSG00000004069.18	ENSMUST00000115854.4	2505	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	4501959	4525559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ENSMUST00000115860.8	chr16	+	2303	7	FSM	ENSMUSG00000005982.15	ENSMUST00000115860.8	2303	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTCTCTAGTTATTGG	NA	NA	NA	NA	NA	NA	NA	NA	3702632	3722633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_3702711_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718742_3719646_3719990_3721329
ENSMUST00000115995.4	chr19	+	3687	12	FSM	ENSMUSG00000024664.6	ENSMUST00000115995.4	3687	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCTGCCTTTAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	10018932	10037474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_10019321_10029565_10029677_10030199_10030398_10031383_10031486_10031590_10031714_10031969_10032031_10032470_10032548_10032960_10033059_10033354_10033452_10033580_10033661_10033788_10033915_10035248
ENSMUST00000116115.3	chr3	+	425	1	FSM	ENSMUSG00000100755.2	ENSMUST00000116115.3	425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATAAAATTTGACAATGG	NA	NA	NA	NA	NA	NA	NA	NA	37768888	37769313	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_37768900_37769300
ENSMUST00000116234.9	chr10	+	2080	6	FSM	ENSMUSG00000060904.15	ENSMUST00000116234.9	2080	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGATGTCTTTAGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	88566929	88579956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577948_88578884
ENSMUST00000116269.9	chr7	-	2487	17	FSM	ENSMUSG00000030720.17	ENSMUST00000116269.9	2487	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTGATTTCTTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	126183452	126170571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474_126182620_126183345
ENSMUST00000116318.3	chr11	+	799	5	FSM	ENSMUSG00000075410.14	ENSMUST00000116318.3	799	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTGTAAAGACTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	116547933	116559213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_116548134_116548363_116548433_116550123_116550203_116550558_116550654_116558857
ENSMUST00000116358.8	chr11	+	1159	11	FSM	ENSMUSG00000023170.15	ENSMUST00000116358.8	1159	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGCCTGAGTGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	69804875	69807416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69804897_69805098_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
ENSMUST00000116389.9	chr2	+	1759	9	FSM	ENSMUSG00000027593.16	ENSMUST00000116389.9	1759	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGCTTGTTTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	154633029	154709181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_154633469_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ENSMUST00000116415.9	chr8	-	1520	9	FSM	ENSMUSG00000031816.16	ENSMUST00000116415.9	1520	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGTATGTTTGTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	121835066	121824291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_121824665_121825446_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832456_121832571_121833608_121833713_121835026
ENSMUST00000116420.4	chr12	-	2066	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAATTCAAGGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	73333483	73326784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
ENSMUST00000116440.9	chr15	-	896	7	FSM	ENSMUSG00000055762.17	ENSMUST00000116440.9	896	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	75781146	75767336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773102_75781093
ENSMUST00000116457.9	chr2	-	1683	10	FSM	ENSMUSG00000027215.14	ENSMUST00000116457.9	1683	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATCCAGTCTGAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	93293291	93249460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475_93260601_93264205_93264279_93267732_93267816_93273713_93273790_93293254
ENSMUST00000116492.3	chr9	+	2111	16	FSM	ENSMUSG00000009741.16	ENSMUST00000116492.3	2111	16	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGGGAGCGCTCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	113760631	113805885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413_113804646_113805573
ENSMUST00000116495.8	chrX	+	1613	5	FSM	ENSMUSG00000079317.11	ENSMUST00000116495.8	1613	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTCATTTGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	165223569	165236136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_165223836_165229786_165229899_165232783_165232929_165233624_165233711_165235132
ENSMUST00000116558.3	chr19	-	1189	2	FSM	ENSMUSG00000024939.7	ENSMUST00000116558.3	1189	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	5779661	5778114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5778907_5779264
ENSMUST00000116560.3	chr19	+	1148	6	FSM	ENSMUSG00000056201.9	ENSMUST00000116560.3	1148	6	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	1213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGGCTTTTGGGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	5540512	5544057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408_5543519_5543520_5543527_5543528
ENSMUST00000116621.2	chrX	-	908	3	FSM	ENSMUSG00000031059.10	ENSMUST00000116621.2	908	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGTTACTGCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	20483858	20481564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_20481782_20481952_20482084_20483298
ENSMUST00000116625.10	chr16	+	1094	7	FSM	ENSMUSG00000022871.14	ENSMUST00000116625.10	1094	7	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGCTTCAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	22739201	22758502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_22739246_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ENSMUST00000116641.9	chr17	+	1858	11	FSM	ENSMUSG00000002279.20	ENSMUST00000116641.9	1858	11	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCCTCCTGTCTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	25798150	25881800	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25798354_25804516_25804827_25807649_25807661_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ENSMUST00000116706.3	chr12	-	82	1	FSM	ENSMUSG00000080356.3	ENSMUST00000116706.3	82	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCTTCGCGAACTCGG	NA	NA	NA	NA	NA	NA	NA	NA	110244563	110244481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_110244500_110244600
ENSMUST00000117073.2	chr7	-	2209	15	NNC	ENSMUSG00000030849.19	novel	2463	17	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATGTGTCTTCCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	129863587	129765688	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_129765948_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129863478
ENSMUST00000117083.2	chr9	-	1999	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTAGGTCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65792338	65740437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ENSMUST00000117146.9	chr1	-	2181	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGTTTCTATGACAATG	NA	NA	NA	NA	NA	NA	NA	NA	16689713	16640005	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ENSMUST00000117160.2	chr8	+	3785	14	FSM	ENSMUSG00000031841.20	ENSMUST00000117160.2	3785	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGCTGGGCAGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	119010471	120051660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_119010638_119232342_119232455_119401756_119401966_119484106_119484224_119578457_119578611_119694787_119694933_119821923_119822103_119925593_119925735_119963522_119963706_119968928_119969183_120015324_120015468_120039240_120039475_120040711_120040934_120050133
ENSMUST00000117236.8	chr14	+	2538	15	FSM	ENSMUSG00000022214.16	ENSMUST00000117236.8	2538	15	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTCTGTGTCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	55797462	55807522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_55797579_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUST00000117245.2	chr1	+	4361	18	FSM	ENSMUSG00000026510.11	ENSMUST00000117245.2	4361	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCCTGGTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	182236736	182289997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273838_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
ENSMUST00000117278.8	chr3	+	2593	11	FSM	ENSMUSG00000032657.16	ENSMUST00000117278.8	2593	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTTTGGAGTATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	89090939	89096595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89091256_89091719_89091831_89091936_89092057_89092195_89092304_89092740_89092917_89093040_89093141_89094085_89094156_89094365_89094912_89095382_89095452_89095529_89095784_89095872
ENSMUST00000117324.8	chr7	+	858	5	FSM	ENSMUSG00000038695.14	ENSMUST00000117324.8	858	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGCCTGGGCTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	44117446	44121075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44117584_44118230_44118394_44119835_44119962_44120536_44120732_44120838
ENSMUST00000117346.2	chr19	-	2080	12	FSM	ENSMUSG00000037418.7	ENSMUST00000117346.2	2080	12	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCAGTGTGATTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	9978997	9962537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_9962787_9963560_9963736_9964014_9964359_9966485_9966638_9966965_9967047_9967837_9967991_9969000_9969079_9969420_9969576_9970129_9970364_9970591_9970687_9974390_9974579_9978821
ENSMUST00000117364.8	chr5	-	1657	10	FSM	ENSMUSG00000035234.19	ENSMUST00000117364.8	1657	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTAAAGTTTGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	100968806	100953068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_100953318_100953763_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ENSMUST00000117425.8	chr5	-	1231	7	FSM	ENSMUSG00000015806.13	ENSMUST00000117425.8	1231	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	45605515	45591394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45605434
ENSMUST00000117462.2	chr19	-	1495	4	FSM	ENSMUSG00000041845.12	ENSMUST00000117462.2	1495	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGTCCTGACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	4489449	4475694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4476790_4482082_4482193_4482795_4482884_4489247
ENSMUST00000117507.10	chr3	-	1901	11	FSM	ENSMUSG00000028108.17	ENSMUST00000117507.10	1901	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTTGTCTTTAGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	95646881	95641458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95641784_95642134_95642223_95642510_95642732_95643158_95643534_95643783_95644104_95644324_95644370_95644944_95645026_95645119_95645201_95645323_95645429_95645550_95645614_95646684
ENSMUST00000117557.8	chr9	+	2019	9	FSM	ENSMUSG00000015656.18	ENSMUST00000117557.8	2019	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	40712597	40716496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_40712645_40713213_40713424_40713713_40713920_40714091_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ENSMUST00000117644.8	chr16	-	1727	12	FSM	ENSMUSG00000058240.15	ENSMUST00000117644.8	1727	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTTTTTAAATATTCA	NA	NA	NA	NA	NA	NA	NA	NA	91525690	91486229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUST00000117687.8	chr18	-	2271	9	FSM	ENSMUSG00000024500.21	ENSMUST00000117687.8	2271	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTCCTCTTTGTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	43032359	42778333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_42779073_42781738_42781831_42796174_42796345_42821366_42821532_42834534_42834713_42864851_42864965_42870965_42871132_42874160_42874259_43031809
ENSMUST00000117713.8	chr16	-	1964	6	FSM	ENSMUSG00000004071.14	ENSMUST00000117713.8	1964	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCCTCTGCTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	4607794	4585202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_4586514_4586608_4586832_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ENSMUST00000117757.9	chr6	-	1273	7	FSM	ENSMUSG00000057666.19	ENSMUST00000117757.9	1273	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	125143430	125138815	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125143356
ENSMUST00000117766.8	chr5	+	3556	10	FSM	ENSMUSG00000029486.14	ENSMUST00000117766.8	3556	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTGTATGAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	96357351	96414586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_96357425_96357939_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ENSMUST00000117831.8	chr19	-	1378	7	FSM	ENSMUSG00000024847.16	ENSMUST00000117831.8	1378	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATCTTGAAGGCTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	4175858	4164445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335_4171546_4175729
ENSMUST00000117890.8	chr17	+	1641	7	FSM	ENSMUSG00000024160.17	ENSMUST00000117890.8	1641	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTCTATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	25105616	25111123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25105735_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ENSMUST00000117958.8	chr16	+	1551	9	FSM	ENSMUSG00000022678.17	ENSMUST00000117958.8	1551	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAATCCCTGCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	13981150	14010692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14010205
ENSMUST00000118001.8	chr17	+	1652	7	FSM	ENSMUSG00000014767.18	ENSMUST00000118001.8	1652	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGCTTGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	15720171	15737689	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_15720287_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15735877_15735973_15736965
ENSMUST00000118015.9	chr3	-	1922	7	FSM	ENSMUSG00000019528.19	ENSMUST00000118015.9	1922	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTGTTTAAGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	20209481	20176247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_20177029_20179421_20179642_20192180_20192308_20204702_20204866_20205116_20205292_20206893_20207030_20209161
ENSMUST00000118043.8	chr18	-	1986	14	FSM	ENSMUSG00000024501.21	ENSMUST00000118043.8	1986	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATCACTAAGCCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	43506337	43457291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_43457486_43458789_43458953_43461389_43461570_43462755_43462927_43465936_43466079_43466945_43467103_43475306_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43506130
ENSMUST00000118097.8	chr5	-	1232	7	FSM	ENSMUSG00000015806.13	ENSMUST00000118097.8	1232	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	45607513	45591394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607431
ENSMUST00000118121.2	chr5	+	919	2	FSM	ENSMUSG00000118332.2	ENSMUST00000118121.2	919	2	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCGGTGTTTTCCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	143534500	143537693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_143534890_143537163
ENSMUST00000118125.9	chr7	+	2275	9	FSM	ENSMUSG00000074141.14	ENSMUST00000118125.9	2275	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGGCTCACTTCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	44465819	44490228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44465908_44481539_44481606_44483374_44483517_44486054_44486291_44486799_44486913_44487412_44487615_44488574_44488644_44488747_44488885_44489006
ENSMUST00000118155.8	chr11	-	884	3	FSM	ENSMUSG00000020738.17	ENSMUST00000118155.8	884	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTCTTTATTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	115427007	115413927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115414596_115425377_115425510_115426923
ENSMUST00000118224.2	chr5	-	399	1	FSM	ENSMUSG00000084235.3	ENSMUST00000118224.2	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	576	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCCTCTGCTTGTAATAC	NA	NA	NA	NA	NA	NA	NA	NA	22733717	22733318	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_22733300_22733700
ENSMUST00000118248.2	chr2	+	480	1	FSM	ENSMUSG00000082399.2	ENSMUST00000118248.2	480	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	578	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGACTCCTGCCAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	134645868	134646348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_134645900_134646300
ENSMUST00000118305.8	chrX	+	1684	3	FSM	ENSMUSG00000046180.12	ENSMUST00000118305.8	1684	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCAGCAGTGTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	57954719	57965664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_57954780_57956768_57956922_57964193
ENSMUST00000118307.2	chr11	-	348	1	FSM	ENSMUSG00000083061.2	ENSMUST00000118307.2	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1541	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAAAGTTTTCCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	49569884	49569536	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_49569500_49569900
ENSMUST00000118310.8	chr16	+	1700	5	FSM	ENSMUSG00000044442.12	ENSMUST00000118310.8	1700	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGCCTTTGTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	87151114	87165630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87164352
ENSMUST00000118368.8	chr11	-	696	6	FSM	ENSMUSG00000020415.17	ENSMUST00000118368.8	696	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTCAGATTGTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	43317044	43311099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317015
ENSMUST00000118420.8	chr5	+	843	4	FSM	ENSMUSG00000034211.15	ENSMUST00000118420.8	843	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCCCCCAAAGAAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	129792567	129795461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_129792614_129792747_129792923_129793790_129793931_129794979
ENSMUST00000118429.8	chr7	-	2774	9	FSM	ENSMUSG00000047554.15	ENSMUST00000118429.8	2774	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTATCTGTCTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	109586136	109572691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168_109585453_109585573_109585800_109585924
ENSMUST00000118459.2	chr6	-	685	1	FSM	ENSMUSG00000086922.3	ENSMUST00000118459.2	685	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCTTCCCCATCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	31119598	31118913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_31118900_31119600
ENSMUST00000118515.9	chr7	-	1662	8	FSM	ENSMUSG00000008140.19	ENSMUST00000118515.9	1662	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTGCCTTCTGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	44145830	44139534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44140395_44140586_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ENSMUST00000118558.5	chr6	-	315	4	FSM	ENSMUSG00000023089.13	ENSMUST00000118558.5	315	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTCCATGTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	24527569	24518664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_24518824_24519190_24519257_24527271_24527317_24527524
ENSMUST00000118587.8	chr3	-	1632	5	FSM	ENSMUSG00000027954.10	ENSMUST00000118587.8	1632	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCTTTTCTGCCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	89188449	89179042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89179912_89180078_89180130_89180263_89180330_89183436_89183733_89188099
ENSMUST00000118628.8	chr7	+	864	5	FSM	ENSMUSG00000038695.14	ENSMUST00000118628.8	864	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTTGTGCCTGGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	44117468	44121072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44117615_44118230_44118394_44119835_44119962_44120536_44120732_44120838
ENSMUST00000118642.2	chrX	+	387	1	FSM	ENSMUSG00000059461.8	ENSMUST00000118642.2	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	507	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGGTCATACCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	161349852	161350239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_161349900_161350200
ENSMUST00000118658.2	chr7	-	309	1	FSM	ENSMUSG00000081911.2	ENSMUST00000118658.2	309	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTCGTGGCTGCTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	105339774	105339465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_105339500_105339800
ENSMUST00000118737.3	chr7	+	1395	6	FSM	ENSMUSG00000030917.14	ENSMUST00000118737.3	1395	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTTTTCTTCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	119701712	119720215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_119701739_119702137_119702180_119703852_119704053_119714608_119714778_119715442_119715582_119719396
ENSMUST00000118860.2	chr3	-	1403	4	FSM	ENSMUSG00000027954.10	ENSMUST00000118860.2	1403	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACATGCTTTTCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	89186948	89179046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89179912_89180078_89180130_89183436_89183733_89186757
ENSMUST00000118875.8	chr6	-	1420	7	FSM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	125142736	125138816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
ENSMUST00000118902.8	chr4	-	1887	10	FSM	ENSMUSG00000032897.18	ENSMUST00000118902.8	1887	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	NA	NA	NA	NA	NA	NA	NA	120688769	120614634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120688637
ENSMUST00000118924.2	chrX	+	621	1	FSM	ENSMUSG00000082035.2	ENSMUST00000118924.2	621	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	95528464	95529085	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_95528500_95529100
ENSMUST00000118966.8	chr12	+	4892	4	FSM	ENSMUSG00000046768.14	ENSMUST00000118966.8	4892	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTCATTCGATACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	75355095	75444730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_75355776_75422121_75422181_75438452_75438618_75440742
ENSMUST00000118993.8	chr5	+	1867	6	FSM	ENSMUSG00000034118.16	ENSMUST00000118993.8	1867	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAATGGTCCCGTTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	130102166	130164570	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_130102276_130130430_130131377_130143308_130143508_130158348_130158400_130163299_130163340_130164048
ENSMUST00000118998.2	chr5	+	402	1	FSM	ENSMUSG00000080893.2	ENSMUST00000118998.2	402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	426	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCAGTGAAGACTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	130217235	130217637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_130217200_130217600
ENSMUST00000119002.2	chr3	-	568	4	FSM	ENSMUSG00000028062.16	ENSMUST00000119002.2	568	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTCTCACCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	88460166	88457126	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460036
ENSMUST00000119052.2	chr11	-	395	1	FSM	ENSMUSG00000082110.2	ENSMUST00000119052.2	395	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	486	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCACATGAAAGACTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	78476381	78475986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_78476000_78476400
ENSMUST00000119128.9	chr11	+	1235	7	FSM	ENSMUSG00000082286.12	ENSMUST00000119128.9	1235	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTCGGTTGTGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	3076005	3081004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_3076179_3077478_3077645_3078928_3079166_3079381_3079521_3079764_3079912_3080152_3080314_3080792
ENSMUST00000119149.8	chr2	-	1458	4	FSM	ENSMUSG00000078880.11	ENSMUST00000119149.8	1458	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	675	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATCAGTGTAAGAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	176328136	176315986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_176317159_176317363_176317491_176324514_176324570_176328032
ENSMUST00000119273.2	chr16	-	778	4	FSM	ENSMUSG00000022706.17	ENSMUST00000119273.2	778	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGAGTATCTGTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	18695289	18690975	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_18691413_18692286_18692446_18694073_18694187_18695220
ENSMUST00000119379.2	chr6	+	455	4	FSM	ENSMUSG00000002416.14	ENSMUST00000119379.2	455	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATGTTTCTGATGACAA	NA	NA	NA	NA	NA	NA	NA	NA	39569516	39576405	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_39569647_39573384_39573530_39575199_39575300_39576325
ENSMUST00000119394.8	chr4	+	741	8	FSM	ENSMUSG00000028608.16	ENSMUST00000119394.8	741	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTATTCTCAGAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	107747062	107753058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107752747
ENSMUST00000119438.2	chr2	-	645	1	FSM	ENSMUSG00000080859.2	ENSMUST00000119438.2	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	513	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTCAATAGTTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	105385190	105384545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_105384500_105385200
ENSMUST00000119591.2	chr19	-	3481	21	FSM	ENSMUSG00000025199.17	ENSMUST00000119591.2	3481	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGAATCTCTACTCATT	NA	NA	NA	NA	NA	NA	NA	NA	44095916	44061774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ENSMUST00000119604.8	chr5	+	1208	4	FSM	ENSMUSG00000034211.15	ENSMUST00000119604.8	1208	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGGCCTGTTTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	129792579	129795755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_129792614_129792747_129793006_129793790_129793931_129794979
ENSMUST00000119606.8	chr10	+	1841	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACCAAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	80972382	80984277	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80972494_80979795_80981052_80983803
ENSMUST00000119780.2	chr6	+	471	1	FSM	ENSMUSG00000055093.11	ENSMUST00000119780.2	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1915	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGTATGCGTTAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	122433862	122434333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_122433900_122434300
ENSMUST00000119822.2	chr2	+	798	1	FSM	ENSMUSG00000081992.2	ENSMUST00000119822.2	798	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3848	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCAGATTTTTAATGG	NA	NA	NA	NA	NA	NA	NA	NA	34455010	34455808	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_34455000_34455800
ENSMUST00000119825.8	chr17	-	3769	18	FSM	ENSMUSG00000003534.18	ENSMUST00000119825.8	3769	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	36011502	35992458	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36011322
ENSMUST00000119827.8	chr10	-	1253	9	FSM	ENSMUSG00000019942.14	ENSMUST00000119827.8	1253	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTCTGTATATGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	69188733	69174153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69187421_69187513_69188665
ENSMUST00000119847.2	chr9	-	1445	7	FSM	ENSMUSG00000032040.16	ENSMUST00000119847.2	1445	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTGATGGTGTAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	35087355	35035707	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_35036141_35036462_35036640_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
ENSMUST00000119912.2	chr7	-	653	3	FSM	ENSMUSG00000044709.7	ENSMUST00000119912.2	653	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCCCAGGCCTCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	19307310	19299170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_19299602_19303662_19303808_19307233
ENSMUST00000119945.8	chr17	+	1018	7	FSM	ENSMUSG00000034729.17	ENSMUST00000119945.8	1018	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	47679815	47689606	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_47679880_47683351_47683417_47683497_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ENSMUST00000119950.2	chr2	+	379	3	FSM	ENSMUSG00000067847.14	ENSMUST00000119950.2	379	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTCTATTTTTACCTA	NA	NA	NA	NA	NA	NA	NA	NA	155986159	155987714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_155986201_155986364_155986510_155987521
ENSMUST00000119953.2	chr16	-	1945	9	FSM	ENSMUSG00000005846.13	ENSMUST00000119953.2	1945	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	11021195	11010833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUST00000119968.8	chr3	+	1339	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACAGAAGTCTTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	87826812	87830969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUST00000120016.3	chr17	+	2796	2	FSM	ENSMUSG00000079605.6	ENSMUST00000120016.3	2796	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAGACTGGCTTGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	27192140	27195177	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_27192289_27192529
ENSMUST00000120056.8	chr16	-	2440	5	FSM	ENSMUSG00000063445.15	ENSMUST00000120056.8	2440	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAAACTTTTGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	4536973	4527922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_4529468_4531503_4531695_4532280_4532531_4534160_4534400_4536758
ENSMUST00000120105.8	chr2	-	1565	7	FSM	ENSMUSG00000009555.17	ENSMUST00000120105.8	1565	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAATGGCTGCGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	32602279	32597455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602221
ENSMUST00000120201.8	chrX	-	1859	7	FSM	ENSMUSG00000031310.17	ENSMUST00000120201.8	1859	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCAGCCTCTCCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	100463415	100458535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
ENSMUST00000120240.8	chr6	+	1195	9	FSM	ENSMUSG00000029993.17	ENSMUST00000120240.8	1195	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCTTCCTCTCACGAA	NA	NA	NA	NA	NA	NA	NA	NA	86986217	87005443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_86986372_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997825_87000109_87000171_87002467_87002643_87005276
ENSMUST00000120276.9	chr17	-	4486	13	FSM	ENSMUSG00000024002.19	ENSMUST00000120276.9	4486	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCATGGAACCCTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	32503083	32423883	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_32425968_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503036
ENSMUST00000120281.8	chr10	-	1793	9	FSM	ENSMUSG00000000901.18	ENSMUST00000120281.8	1793	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	75768309	75759055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_75759325_75759792_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ENSMUST00000120327.3	chr5	+	1811	11	FSM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCAGTGAAGGGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	108777874	108794537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ENSMUST00000120356.8	chrX	+	1520	6	FSM	ENSMUSG00000001127.13	ENSMUST00000120356.8	1520	6	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTTTCTCCAACTATCT	NA	NA	NA	NA	NA	NA	NA	NA	20714816	20719128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168
ENSMUST00000120367.8	chr9	-	2885	11	FSM	ENSMUSG00000031969.17	ENSMUST00000120367.8	2885	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCATGTTACGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	26910862	26885430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901489_26901874_26901989_26902535_26902706_26903455_26903557_26910689
ENSMUST00000120375.8	chr11	-	4697	26	FSM	ENSMUSG00000001507.17	ENSMUST00000120375.8	4697	26	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTCTGCTCCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	94967627	94935299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_94936590_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956_94967485_94967593
ENSMUST00000120377.8	chr3	-	2021	10	FSM	ENSMUSG00000028063.16	ENSMUST00000120377.8	2021	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGCCCTGGCCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	88410614	88390511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
ENSMUST00000120415.8	chr1	-	621	5	FSM	ENSMUSG00000061816.16	ENSMUST00000120415.8	621	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGAAATCCCATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	66974492	66965224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_66965445_66965692_66965867_66969344_66969489_66973676_66973702_66974434
ENSMUST00000120450.2	chr16	-	1865	11	FSM	ENSMUSG00000022962.16	ENSMUST00000120450.2	1865	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTGATTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	91443823	91430292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ENSMUST00000120454.3	chr7	+	742	2	FSM	ENSMUSG00000044881.8	ENSMUST00000120454.3	742	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAAAGGAGTGAACTCG	NA	NA	NA	NA	NA	NA	NA	NA	100186438	100188986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_100186473_100188278
ENSMUST00000120512.8	chr6	+	1871	4	FSM	ENSMUSG00000041390.19	ENSMUST00000120512.8	1871	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTAGAACACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	15721085	15800807	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_15721364_15740986_15741110_15770212_15770492_15799616
ENSMUST00000120595.8	chr7	+	2255	19	FSM	ENSMUSG00000040811.16	ENSMUST00000120595.8	2255	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAGTCTGGTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	18915094	18940407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_18915149_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ENSMUST00000120658.2	chr2	-	433	1	FSM	ENSMUSG00000082345.2	ENSMUST00000120658.2	433	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGTATGTGTTAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69568133	69567700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_69567700_69568100
ENSMUST00000120664.8	chr13	+	4207	10	FSM	ENSMUSG00000021699.18	ENSMUST00000120664.8	4207	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAATATGAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	110039639	110089995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ENSMUST00000120690.2	chr9	-	3627	6	FSM	ENSMUSG00000032328.13	ENSMUST00000120690.2	3627	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGTGCTGTTTATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	79700789	79676224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79700255
ENSMUST00000120699.8	chr11	+	746	4	FSM	ENSMUSG00000020843.16	ENSMUST00000120699.8	746	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGAGGTGGTATGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	76297777	76305155	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_76297970_76300467_76300665_76301952_76302026_76304871
ENSMUST00000120725.2	chr8	+	1641	9	FSM	ENSMUSG00000046295.14	ENSMUST00000120725.2	1641	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGACAGTGTGTTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	71858667	71862127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859916_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ENSMUST00000120827.9	chr5	-	1217	2	FSM	ENSMUSG00000059325.15	ENSMUST00000120827.9	1217	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGAGTCTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	77243100	77234834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_77235664_77242712
ENSMUST00000120859.9	chr15	-	1392	11	FSM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATTAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	79326203	79303365	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
ENSMUST00000120867.8	chr5	-	1234	7	FSM	ENSMUSG00000015806.13	ENSMUST00000120867.8	1234	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	45607307	45591394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607223
ENSMUST00000120912.8	chr5	+	2345	10	FSM	ENSMUSG00000029247.18	ENSMUST00000120912.8	2345	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGCTGTGTGGTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	77099194	77115356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_77099516_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ENSMUST00000120928.2	chr11	+	1402	4	FSM	ENSMUSG00000048277.16	ENSMUST00000120928.2	1402	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGCTGGGTGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	117700521	117705109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_117700630_117703374_117703523_117703871_117704012_117704103
ENSMUST00000120959.8	chr2	-	1458	4	FSM	ENSMUSG00000078881.11	ENSMUST00000120959.8	1458	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATCAGTGTAAGAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	176178566	176166422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_176167595_176167799_176167927_176174950_176175006_176178462
ENSMUST00000121034.8	chr3	+	2035	8	FSM	ENSMUSG00000027900.16	ENSMUST00000121034.8	2035	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTTGTCATGAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	106455179	106482161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_106455237_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ENSMUST00000121075.8	chr8	+	1740	5	FSM	ENSMUSG00000031543.19	ENSMUST00000121075.8	1740	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAAACACGTTAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	23629045	23639295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_23629512_23630160_23630245_23631179_23631246_23631611_23631737_23638296
ENSMUST00000121093.8	chr6	+	2597	13	FSM	ENSMUSG00000034930.17	ENSMUST00000121093.8	2597	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTCTTTCACTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	83114069	83129560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_83114438_83114941_83115228_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ENSMUST00000121112.6	chr3	-	1447	4	FSM	ENSMUSG00000028266.18	ENSMUST00000121112.6	1447	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGAAGAAAAAAATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	143908093	143894392	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_143895067_143899656_143899813_143900167_143900265_143907573
ENSMUST00000121150.2	chr2	-	564	1	FSM	ENSMUSG00000081889.2	ENSMUST00000121150.2	564	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGGTTCAGAAACAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	4087229	4086665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_4086700_4087200
ENSMUST00000121161.8	chr10	+	1344	4	FSM	ENSMUSG00000020053.19	ENSMUST00000121161.8	1344	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCTTTAGGAGTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	87696467	87766761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_87697248_87700592_87700750_87749480_87749663_87766536
ENSMUST00000121270.8	chr7	+	3620	16	FSM	ENSMUSG00000035545.14	ENSMUST00000121270.8	3620	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTCTGCTTGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4140064	4151171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_4140155_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ENSMUST00000121309.2	chr2	+	483	1	FSM	ENSMUSG00000084383.2	ENSMUST00000121309.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTACACAAAGAAATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	24875995	24876478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_24876000_24876500
ENSMUST00000121321.2	chr19	-	642	1	FSM	ENSMUSG00000080885.2	ENSMUST00000121321.2	642	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGCTTCAATAGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	37273195	37272553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_37272600_37273200
ENSMUST00000121360.8	chr6	+	1188	6	FSM	ENSMUSG00000029911.15	ENSMUST00000121360.8	1188	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	40448401	40457929	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ENSMUST00000121442.2	chr4	-	491	3	FSM	ENSMUSG00000040795.13	ENSMUST00000121442.2	491	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGACTTGTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	129512889	129511891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_129512156_129512284_129512429_129512806
ENSMUST00000121455.3	chr11	+	2255	2	FSM	ENSMUSG00000083899.3	ENSMUST00000121455.3	2255	2	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCAGAACTATGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	77184269	77186724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_77185700_77185899
ENSMUST00000121532.8	chr7	-	915	6	FSM	ENSMUSG00000060538.15	ENSMUST00000121532.8	915	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTGTAAGGTACTTAC	NA	NA	NA	NA	NA	NA	NA	NA	126497425	126485391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197_126496397_126497395
ENSMUST00000121651.8	chr4	+	620	5	FSM	ENSMUSG00000042198.13	ENSMUST00000121651.8	620	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACATGTTTTGGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	3938913	3943521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_3939132_3939423_3939527_3941245_3941312_3942720_3942820_3943387
ENSMUST00000121658.2	chr2	-	1000	1	FSM	ENSMUSG00000083773.5	ENSMUST00000121658.2	1000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACCCTGGACCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	28824621	28823621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_28823600_28824600
ENSMUST00000121674.9	chr18	-	2778	10	FSM	ENSMUSG00000038425.19	ENSMUST00000121674.9	2778	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGCTCTCACTGTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	70663691	70641753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70663258
ENSMUST00000121783.7	chr8	-	1945	5	FSM	ENSMUSG00000015341.18	ENSMUST00000121783.7	1945	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACCCTCTCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	23747037	23731368	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689
ENSMUST00000121931.8	chr3	+	2112	13	FSM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	89072146	89084228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ENSMUST00000121967.2	chr2	-	279	1	FSM	ENSMUSG00000082044.2	ENSMUST00000121967.2	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	506	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGAATGGTGACGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	131164286	131164007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_131164000_131164300
ENSMUST00000122101.8	chr7	+	3233	3	FSM	ENSMUSG00000055407.15	ENSMUST00000122101.8	3233	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGTCTCTGGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	98916653	98986343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_98918521_98964895_98965110_98985191
ENSMUST00000122129.8	chr4	-	3249	18	FSM	ENSMUSG00000028849.18	ENSMUST00000122129.8	3249	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	126150070	126125959	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ENSMUST00000122133.2	chr2	+	279	1	FSM	ENSMUSG00000081751.2	ENSMUST00000122133.2	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGCTGTCTGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	156164321	156164600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_156164300_156164600
ENSMUST00000122202.8	chr7	-	1336	7	FSM	ENSMUSG00000061479.16	ENSMUST00000122202.8	1336	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	26895670	26886431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895418
ENSMUST00000122300.8	chr12	+	2268	16	FSM	ENSMUSG00000021288.20	ENSMUST00000122300.8	2268	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTCATAACTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	111725446	111773161	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755921_111761981_111762113_111772441_111772509_111772748
ENSMUST00000122365.2	chr16	+	611	6	FSM	ENSMUSG00000098371.2	ENSMUST00000122365.2	611	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAAGTAATGAGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	55786705	55801084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55800957
ENSMUST00000122394.8	chr5	+	982	5	FSM	ENSMUSG00000029404.16	ENSMUST00000122394.8	982	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGTGCCTTTCCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	124254184	124256159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_124254588_124254977_124255257_124255333_124255452_124255892_124255963_124256047
ENSMUST00000122441.2	chr9	+	2081	13	FSM	ENSMUSG00000032307.17	ENSMUST00000122441.2	2081	13	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTATGAAAGATACCTA	NA	NA	NA	NA	NA	NA	NA	NA	55057366	55114092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_55057686_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ENSMUST00000122899.8	chr17	+	2743	4	FSM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	36176947	36186488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_36177121_36178121_36179678_36184617_36184832_36185688
ENSMUST00000123238.2	chr1	-	4300	22	NNC	ENSMUSG00000026365.16	novel	4365	22	NA	NA	-2	-20	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAGAATCTAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	140111060	140013616	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_140014261_140016395_140016627_140026607_140026785_140028545_140028723_140029322_140029497_140030074_140030285_140030445_140030623_140033132_140033310_140036229_140036410_140036495_140036679_140040170_140040345_140046324_140046502_140047608_140047792_140063884_140064062_140064433_140064629_140071668_140071843_140075392_140075564_140082206_140082399_140084997_140085075_140090283_140090390_140090688_140090875_140110902
ENSMUST00000123302.8	chr9	+	4800	35	NNC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	149	694	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTCAAGTTATCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	100525820	100839459	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100736134_100736208_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ENSMUST00000123308.2	chrX	+	596	4	ISM	ENSMUSG00000045103.20	ENSMUST00000239019.2	4179	13	129617	2211	129523	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGTTGTTTAAAAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	84221541	84246443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_84221554_84222304_84222429_84234215_84234309_84246076
ENSMUST00000123462.8	chrX	+	1144	6	FSM	ENSMUSG00000086877.8	ENSMUST00000123462.8	1144	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTTATTGTACATCA	NA	NA	NA	NA	NA	NA	NA	NA	20827922	20852962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_20827952_20828088_20828218_20828775_20828897_20833967_20834048_20851664_20851705_20852217
ENSMUST00000123605.9	chr8	-	2039	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAGAATATATTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	110335255	110320108	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ENSMUST00000123626.8	chr15	-	1100	4	FSM	ENSMUSG00000048175.14	ENSMUST00000123626.8	1100	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGCTGTGTGGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	98043587	98033594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98034320_98039164_98039270_98040531_98040696_98043481
ENSMUST00000123680.2	chr9	+	695	2	FSM	ENSMUSG00000010607.9	ENSMUST00000123680.2	695	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTCTAAGATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	22068141	22069654	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_22068210_22069027
ENSMUST00000123791.8	chr15	-	6190	40	FSM	ENSMUSG00000036529.18	ENSMUST00000123791.8	6190	40	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTCCTTTGTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	89199514	89172438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ENSMUST00000123827.9	chr4	+	2036	12	FSM	ENSMUSG00000041025.16	ENSMUST00000123827.9	2036	12	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAACAAACAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	139257858	139344393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_139257967_139259001_139259172_139259591_139259702_139263833_139263944_139330523_139330585_139332309_139332406_139333732_139333874_139334915_139335056_139341104_139341226_139341336_139341430_139342241_139342373_139343638
ENSMUST00000123836.2	chrX	-	875	7	FSM	ENSMUSG00000001134.10	ENSMUST00000123836.2	875	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGATTCAATTGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	20828256	20817900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ENSMUST00000124043.2	chr3	-	187	2	ISM	ENSMUSG00000027883.16	ENST00000674700.1	1952	13	113	23394	113	-20973	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCTCAAAACACTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	108629432	108610291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_108610403_108629356
ENSMUST00000124200.8	chrX	+	1742	9	FSM	ENSMUSG00000009995.18	ENSMUST00000124200.8	1742	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	73326355	73333754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332710_73332789_73332904
ENSMUST00000124258.8	chr2	+	787	6	NNC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	66	-1921	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCCTGCTGGATGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	25390827	25393562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_25390899_25392043_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448
ENSMUST00000124260.8	chr5	+	1051	8	FSM	ENSMUSG00000041939.15	ENSMUST00000124260.8	1051	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTGGCTGTCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	114582363	114591211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_114582425_114582712_114582751_114583448_114583541_114584219_114584368_114588301_114588483_114588766_114588923_114590425_114590530_114590940
ENSMUST00000124303.9	chr14	-	809	2	FSM	ENSMUSG00000021905.15	ENSMUST00000124303.9	809	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCAGGAGTCCCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	31807686	31804714	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_31805204_31807366
ENSMUST00000124329.2	chrX	+	1660	3	FSM	ENSMUSG00000086629.9	ENSMUST00000124329.2	1660	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGAAGAGTAGTTATTAG	NA	NA	NA	NA	NA	NA	NA	NA	107946991	108018512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_107947960_108015726_108015777_108017870
ENSMUST00000124471.2	chr4	+	485	2	FSM	ENSMUSG00000087352.2	ENSMUST00000124471.2	485	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGCTTCTCTCCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	132259997	132260912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_132260219_132260648
ENSMUST00000124565.3	chr9	-	711	2	FSM	ENSMUSG00000086158.3	ENSMUST00000124565.3	711	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTGTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	72892658	72887003	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_72887479_72892422
ENSMUST00000124655.8	chr17	-	829	7	FSM	ENSMUSG00000067148.16	ENSMUST00000124655.8	829	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTACACACATACCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	46557499	46555026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_46555147_46555231_46555349_46555451_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557463
ENSMUST00000124732.2	chr8	-	761	3	NNC	ENSMUSG00000002393.15	novel	2218	4	NA	NA	870	-1625	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGAGCCGCCCCGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	71833734	71828395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_71828918_71831032_71831172_71833634
ENSMUST00000124838.2	chr10	-	1525	8	FSM	ENSMUSG00000040006.14	ENSMUST00000124838.2	1525	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTGCTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	7656655	7643719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_7644350_7646120_7646285_7649061_7649196_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
ENSMUST00000124932.2	chr11	+	404	2	FSM	ENSMUSG00000059278.10	ENST00000333775.9	715	2	317	-6	317	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCTGTGTGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	69286943	69287506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69287187_69287345
ENSMUST00000124996.8	chr13	+	474	2	FSM	ENSMUSG00000071451.11	ENSMUST00000124996.8	474	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCTTCATTTTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	34346946	34362151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_34347233_34361963
ENSMUST00000125040.8	chr16	-	2200	5	NNC	ENSMUSG00000071533.12	novel	2295	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55850059	55835868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55849965
ENSMUST00000125049.2	chr2	+	2869	7	NIC	ENSMUSG00000027367.17	novel	3116	8	NA	NA	-30	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGAGTGTTCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	127112623	127140852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_127112801_127126014_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
ENSMUST00000125107.8	chr4	+	1551	7	FSM	ENSMUSG00000028608.16	ENSMUST00000125107.8	1551	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTGTGTGTATTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	107747095	107754999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ENSMUST00000125127.8	chr18	+	1683	4	FSM	ENSMUSG00000024571.16	ENSMUST00000125127.8	1683	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACACGTTTGTTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	80250012	80255947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_80250117_80250368_80250559_80253276_80253346_80254627
ENSMUST00000125184.8	chr8	-	711	4	FSM	ENSMUSG00000090137.9	ENSMUST00000125184.8	711	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTAGAGTGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	70963231	70960912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962987
ENSMUST00000125304.8	chr1	-	3378	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTCTTGTCAGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	36484352	36461145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ENSMUST00000125369.8	chr4	+	1719	5	FSM	ENSMUSG00000059810.19	ENSMUST00000125369.8	1719	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGTGTATTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	62617702	62621255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_62618132_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ENSMUST00000125975.8	chr8	+	2408	17	FSM	ENSMUSG00000000738.19	ENSMUST00000125975.8	2408	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCCATGTGTATTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	123789726	123824499	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123789774_123793211_123793315_123797118_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ENSMUST00000126002.2	chr2	+	1190	4	FSM	ENSMUSG00000084781.2	ENSMUST00000126002.2	1190	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTGTGAAGGGGGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92239236	92262653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_92239757_92248071_92248277_92253157_92253372_92262402
ENSMUST00000126071.9	chr13	+	4322	11	FSM	ENSMUSG00000025873.17	ENSMUST00000126071.9	4322	11	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCAGCTGTGGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	54769596	54811876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ENSMUST00000126151.8	chr6	-	1522	10	FSM	ENSMUSG00000004631.16	ENSMUST00000126151.8	1522	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGTGTGGTAAAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	4747157	4674353	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_4674633_4678066_4678111_4689578_4689768_4690468_4690496_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4746979
ENSMUST00000126166.8	chr14	-	2369	12	FSM	ENSMUSG00000022185.20	ENSMUST00000126166.8	2369	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	54891073	54879617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890991
ENSMUST00000126211.2	chr7	-	968	6	FSM	ENSMUSG00000061479.16	ENSMUST00000163311.9	1288	6	0	320	0	-320	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGACATCGCCTTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	26895185	26886751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868
ENSMUST00000126388.8	chr11	+	1938	7	FSM	ENSMUSG00000040938.17	ENSMUST00000126388.8	1938	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTTGAGAGTTCCATTA	NA	NA	NA	NA	NA	NA	NA	NA	70103577	70107239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70103610_70104504_70104704_70104919_70105091_70105191_70105539_70105780_70105925_70106109_70106878_70106962
ENSMUST00000126435.8	chr8	-	2819	5	FSM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTTTTACAATACACAAA	NA	NA	NA	NA	NA	NA	NA	NA	84983953	84976534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_84978341_84980491_84980717_84980804_84980982_84982872_84983049_84983518
ENSMUST00000126610.2	chr2	+	1242	7	FSM	ENSMUSG00000038900.18	ENSMUST00000126610.2	1242	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAATTGTTGGGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	32851570	32854508	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ENSMUST00000126622.8	chr13	+	1446	3	FSM	ENSMUSG00000048603.9	ENSMUST00000126622.8	1446	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTCAATTAAGACAATGC	NA	NA	NA	NA	NA	NA	NA	NA	98453576	98458543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_98454118_98455581_98455654_98457710
ENSMUST00000126691.2	chr3	+	834	3	ISM	ENSMUSG00000042747.13	ENSMUST00000040888.12	1172	5	0	2713	0	-2516	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCTGTGCTTAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	89153272	89154500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_+_89153823_89154084_89154240_89154371
ENSMUST00000126764.2	chr2	+	961	4	FSM	ENSMUSG00000027245.12	ENSMUST00000126764.2	961	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTTCCCCTTGGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	121287443	121289153	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_121287773_121288126_121288183_121288472_121288525_121288629
ENSMUST00000126778.8	chr16	+	491	4	FSM	ENSMUSG00000075704.18	ENSMUST00000126778.8	491	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTCCCTGACTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	18247446	18256560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_18247506_18248560_18248627_18255310_18255368_18256251
ENSMUST00000127233.9	chr19	+	3220	14	FSM	ENSMUSG00000024985.21	ENSMUST00000127233.9	3220	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55730698	55921663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55914408_55914482_55916161_55916187_55919865
ENSMUST00000127477.8	chr3	+	1079	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTGCTTTACTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	32791138	32805715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ENSMUST00000127490.8	chr8	+	1643	5	NIC	ENSMUSG00000036810.17	novel	1731	6	NA	NA	-13	4	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGGTTAGAGATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	88845414	88861738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_88845498_88846407_88846480_88856322_88856433_88856974_88857030_88860415
ENSMUST00000127793.2	chr8	-	646	3	NIC	ENSMUSG00000090137.9	novel	711	4	NA	NA	-24	-1	intron_retention	FALSE	canonical	NA	NA	NA	NA	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTCTAGAGTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	70963029	70960913	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_-_70961179_70961945_70962285_70962987
ENSMUST00000127861.8	chr1	-	863	5	ISM	ENSMUSG00000025980.15	ENST00000452200.6	2388	12	-44	5232	-44	-5232	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTATGGGATTTGATAC	NA	NA	NA	NA	NA	NA	NA	NA	55127402	55122225	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127147
ENSMUST00000127889.2	chr11	+	494	4	NNC	ENSMUSG00000001039.13	novel	817	7	NA	NA	3972	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCCTTCATTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	61399941	61403757	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_61399995_61400265_61400359_61403197_61403266_61403477
ENSMUST00000127896.8	chr9	+	575	5	FSM	ENSMUSG00000036781.14	ENSMUST00000127896.8	575	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCCTCCCTCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	66853372	66856796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66855920_66856000_66856610
ENSMUST00000127994.8	chr16	-	945	7	ISM	ENSMUSG00000022757.20	ENST00000675543.1	1709	8	7136	544	7136	-544	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGCAAGTACCATGACCC	NA	NA	NA	NA	NA	NA	NA	NA	56526057	56511239	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_56511517_56512238_56512280_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973
ENSMUST00000128035.2	chr8	-	1068	9	NNC	ENSMUSG00000003813.16	novel	1842	9	NA	NA	0	-709	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGAGAATTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	85567294	85562248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_-_85562304_85562448_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ENSMUST00000128057.8	chr7	+	2231	4	FSM	ENSMUSG00000031072.15	ENSMUST00000128057.8	2231	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCTGACATTGTAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	144468836	144484485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_144469067_144470164_144470271_144471346_144471418_144482661
ENSMUST00000128187.8	chr5	-	2752	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	100187081	100181435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ENSMUST00000128345.3	chr1	+	2803	9	NNC	ENSMUSG00000035131.15	novel	2760	8	NA	NA	17	-5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGAAGTGCTGTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	146373441	146778204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_146373479_146390405_146390692_146440202_146440269_146558313_146558505_146577393_146577585_146622217_146622324_146627492_146627730_146707298_146707522_146776738
ENSMUST00000128353.8	chr12	-	2577	3	FSM	ENSMUSG00000037904.15	ENSMUST00000128353.8	2577	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTCGTCTTGACTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	110945474	110941786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_110943983_110944381_110944562_110945273
ENSMUST00000128518.2	chr4	+	297	1	FSM	ENSMUSG00000078238.5	ENSMUST00000128518.2	297	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1582	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTCAGTTCCCATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	115924464	115924761	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_115924500_115924800
ENSMUST00000128616.6	chr6	+	2819	4	FSM	ENSMUSG00000029815.13	ENSMUST00000128616.6	2819	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATTTTGCTTTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	49050728	49063685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_49051038_49052019_49052199_49059778_49059861_49061436
ENSMUST00000128727.8	chr5	+	2031	11	FSM	ENSMUSG00000056367.15	ENSMUST00000128727.8	2031	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTTCCTTGTGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	25964994	26055686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_25965127_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
ENSMUST00000128787.8	chr19	-	1436	10	FSM	ENSMUSG00000037916.15	ENSMUST00000128787.8	1436	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTCTCATCCCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	4062673	4057561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062577
ENSMUST00000128788.8	chr11	+	1141	6	FSM	ENSMUSG00000001105.16	ENSMUST00000128788.8	1141	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGTGTGCATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	78427186	78432563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
ENSMUST00000128800.2	chr4	-	469	3	FSM	ENSMUSG00000085213.2	ENSMUST00000128800.2	469	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAATTCAAGGTCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	150653001	150651325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_150651550_150652673_150652787_150652869
ENSMUST00000128952.8	chr11	+	500	3	NIC	ENSMUSG00000060938.15	novel	657	4	NA	NA	-8	-1191	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGTTTTTGAAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	68792452	68794145	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_68792639_68793095_68793269_68794004
ENSMUST00000128972.9	chr8	-	1141	7	FSM	ENSMUSG00000052926.17	ENSMUST00000128972.9	1141	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	85692693	85684295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ENSMUST00000129138.2	chr4	-	632	3	FSM	ENSMUSG00000034785.16	ENST00000388876.3	596	3	-6	-30	1	30	multi-exon	FALSE	canonical	NA	NA	NA	NA	2250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGGGACCAGCAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	107164321	107149530	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_107149620_107150945_107151146_107163978
ENSMUST00000129174.8	chr14	-	729	3	FSM	ENSMUSG00000022090.11	ENSMUST00000129174.8	729	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACACGAAAGCGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	70405288	70401810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_70402243_70403538_70403657_70405109
ENSMUST00000129256.2	chr11	-	650	2	FSM	ENSMUSG00000017288.16	ENSMUST00000129256.2	650	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTTATGTGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	76070464	76067784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_76068209_76070238
ENSMUST00000129321.2	chr11	+	2081	2	FSM	ENSMUSG00000043419.12	ENSMUST00000129321.2	2081	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGAAAGACTGTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	69231286	69233467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69231885_69231984
ENSMUST00000129489.8	chr2	-	2316	15	NNC	ENSMUSG00000026767.13	novel	2344	15	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCACTTTTACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	12424255	12352073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408978_12410670_12410732_12414811_12414892_12423969
ENSMUST00000129523.3	chr17	-	1526	12	FSM	ENSMUSG00000036820.13	ENSMUST00000129523.3	1526	12	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	24382638	24374806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24380555_24380688_24381949_24382090_24382169_24382307_24382555
ENSMUST00000129680.8	chr11	+	1178	4	FSM	ENSMUSG00000001240.14	ENSMUST00000129680.8	1178	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCCTTCCTAGTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	101136853	101139076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101137399_101137880_101137971_101138411_101138515_101138636
ENSMUST00000129883.8	chr6	+	2531	18	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	54	-5	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAAATTCTCAGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	113214857	113258348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
ENSMUST00000129925.8	chr3	+	2608	16	NIC	ENSMUSG00000045934.16	novel	2778	17	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTATTTTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	96069401	96079034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_+_96069576_96069945_96070037_96070408_96070531_96070784_96070846_96070984_96071128_96071564_96071644_96071749_96071886_96072102_96072191_96072487_96072613_96075127_96075195_96075388_96075460_96075914_96076082_96076351_96076526_96077122_96077306_96077668_96077963_96078401
ENSMUST00000130027.2	chr11	-	1024	7	NNC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	0	-6194	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATTTTATGGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	59730664	59717035	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_59717257_59718671_59718852_59720972_59721134_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ENSMUST00000130048.8	chr19	-	1158	7	FSM	ENSMUSG00000024962.14	ENSMUST00000130048.8	1158	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTGTCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	6964997	6959840	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
ENSMUST00000130130.8	chr2	-	744	5	NNC	ENSMUSG00000047617.12	novel	981	7	NA	NA	430	-3	intron_retention	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTGAGTTGTGAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	25350676	25349496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_25349714_25349786_25349872_25350020_25350370_25350456_25350507_25350633
ENSMUST00000130163.8	chr18	+	1386	5	FSM	ENSMUSG00000008301.12	ENSMUST00000130163.8	1386	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTACCATTTCTACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	56695514	56720261	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_56695796_56708533_56709121_56713251_56713373_56717362_56717447_56719948
ENSMUST00000130411.7	chr2	+	3527	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTTCTTCATTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	162773447	162779041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ENSMUST00000130420.8	chr11	-	3391	18	ISM	ENSMUSG00000033389.17	ENST00000262444.13	2910	22	102883	-936	102733	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1782	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGGCACATGGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	64950660	64892866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_64894277_64896279_64896332_64898888_64899267_64900707_64900866_64902696_64902925_64903732_64903751_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649
ENSMUST00000130834.8	chr4	+	1426	10	NNC	ENSMUSG00000028347.15	novel	2461	10	NA	NA	186	385	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAAAATCTAGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	48585550	48662470	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
ENSMUST00000130940.8	chr2	+	996	10	NIC	ENSMUSG00000027523.21	novel	2567	12	NA	NA	900	-962	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGAGCATCTGGAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	174127048	174187333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_+_174127271_174130283_174130380_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175
ENSMUST00000131011.2	chr13	-	540	3	FSM	ENSMUSG00000017778.15	ENSMUST00000131011.2	540	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGCCTCGTCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	86195023	86192934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_86193028_86193845_86193989_86194719
ENSMUST00000131056.2	chr17	-	886	7	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	13147	-3058	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTTTGATCACCGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	56878438	56872996	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_56873083_56873325_56873617_56873878_56874019_56874532_56874625_56875894_56876023_56878209_56878320_56878399
ENSMUST00000131170.2	chr11	+	778	6	ISM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	3621	1438	3545	-1438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTAATTTCTGGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	101210659	101212925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_+_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUST00000131327.8	chr19	-	2350	13	NIC	ENSMUSG00000001750.17	novel	2729	20	NA	NA	2158	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTCCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	3953072	3946049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948876_3948979_3949120_3951890_3952557_3952630_3952725_3952881_3952965_3953045
ENSMUST00000131728.4	chr10	-	2483	12	FSM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTTGTGTGTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	128401856	128393636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ENSMUST00000131801.2	chr2	-	3215	3	FSM	ENSMUSG00000085546.2	ENSMUST00000131801.2	3215	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTGACTGAACTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	156181301	156174236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_156176535_156176964_156177376_156180795
ENSMUST00000131814.8	chr3	+	596	4	NNC	ENSMUSG00000048100.14	novel	2443	4	NA	NA	-1	-1852	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGGTTCCACCCGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	108479013	108488686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_108479069_108480195_108480275_108485431_108485530_108488322
ENSMUST00000131818.8	chr11	-	1260	8	NNC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	5947	-323	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGACAGAGCGCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	79139485	79131101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79134225_79134402_79135288_79135390_79136995_79137128_79139216
ENSMUST00000131871.8	chr16	+	1737	10	NNC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	22926527	22932697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ENSMUST00000132032.8	chr8	-	2542	7	FSM	ENSMUSG00000031601.17	ENSMUST00000132032.8	2542	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTGTGACTGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	40968888	40945582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40968744
ENSMUST00000132034.5	chr5	-	576	2	FSM	ENSMUSG00000038803.8	ENSMUST00000132034.5	576	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTTGTGGTCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	31065069	31063861	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_31064111_31064742
ENSMUST00000132100.2	chr1	-	472	2	FSM	ENSMUSG00000086053.2	ENSMUST00000132100.2	472	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGATGAGCGTACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	75373007	75368774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_75369090_75372850
ENSMUST00000132188.8	chr1	-	1398	3	ISM	ENSMUSG00000067071.9	ENSMUST00000086851.2	1335	4	14	0	14	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	1362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATGTGTCCAATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	91340930	91339204	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_-_91340205_91340442_91340525_91340614
ENSMUST00000132253.5	chr5	-	1144	3	FSM	ENSMUSG00000038803.8	ENSMUST00000132253.5	1144	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAAGTGCATTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	31065132	31063228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_31064111_31064742_31064881_31065008
ENSMUST00000132389.3	chr5	+	2347	1	FSM	ENSMUSG00000106943.3	ENSMUST00000066220.4	2346	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACACAAGACAGGAAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	74253720	74256067	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_74253700_74256100
ENSMUST00000132564.2	chr13	+	751	2	FSM	ENSMUSG00000086480.2	ENSMUST00000132564.2	751	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAATTTTATGTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	111862050	111871658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_111862190_111871046
ENSMUST00000132883.8	chr2	+	2505	4	FSM	ENSMUSG00000078877.12	ENSMUST00000132883.8	2505	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTAAAGCCTTTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	176494025	176503016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_176494029_176499154_176499282_176499487_176499549_176500702
ENSMUST00000132985.2	chr2	+	345	3	NNC	ENSMUSG00000067818.7	novel	1128	4	NA	NA	37	-627	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATCAACTTCACCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	156617376	156622454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_156617459_156620438_156620649_156622401
ENSMUST00000133012.8	chr7	+	1524	6	FSM	ENSMUSG00000025505.17	ENSMUST00000133012.8	1524	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAGAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	140908042	140916724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_140908180_140911330_140911475_140912822_140912922_140913560_140913645_140913923_140914017_140915757
ENSMUST00000133037.8	chr8	-	1060	10	FSM	ENSMUSG00000031816.16	ENSMUST00000133037.8	1060	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACGCAGGCTCAGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	121835131	121824589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_121824665_121825446_121825511_121825737_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
ENSMUST00000133066.2	chr4	-	651	6	NNC	ENSMUSG00000028719.9	novel	3170	6	NA	NA	-7	-1773	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGGGAAAGTCAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	114844346	114820307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114827660_114827700_114844162
ENSMUST00000133074.2	chr7	-	1062	8	ISM	ENSMUSG00000030557.18	ENST00000557785.5	2842	11	-17	17971	0	-17504	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGAAATACTGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	67022606	66901556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999596_66999670_67022460
ENSMUST00000133105.2	chr4	-	820	3	NIC	ENSMUSG00000040520.8	novel	4867	5	NA	NA	102	-412	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATCTCATCAGAATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	26340895	26328044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_-_26328309_26329085_26329163_26340416
ENSMUST00000133280.2	chr13	-	1609	2	FSM	ENSMUSG00000118537.2	ENSMUST00000133280.2	1609	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGATTTTGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	104314947	104310229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_104311513_104314621
ENSMUST00000133306.8	chr6	-	1619	12	FSM	ENSMUSG00000004631.16	ENSMUST00000133306.8	1619	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACATCAACGACTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	4747124	4674417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_4674633_4677162_4677234_4678066_4678111_4689578_4689768_4690468_4690496_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4719373_4719497_4746979
ENSMUST00000133412.8	chr3	-	666	5	ISM	ENSMUSG00000005779.13	ENSMUST00000005923.7	1183	7	99	805	99	-805	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAAATTCTGGAGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	94794173	94792208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_94792345_94792970_94793053_94793385_94793533_94793751_94793959_94794079
ENSMUST00000133595.9	chr17	+	2268	9	FSM	ENSMUSG00000025736.16	ENSMUST00000133595.9	2268	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGGTGGATGCGCCG	NA	NA	NA	NA	NA	NA	NA	NA	26047840	26050817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26048138_26048213_26048313_26048457_26048507_26048579_26048677_26048758_26048828_26048915_26049036_26049112_26049181_26049273_26049409_26049483
ENSMUST00000133808.2	chr2	-	2483	2	FSM	ENSMUSG00000087679.3	ENSMUST00000133808.2	2483	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGAGTGATTGCTTACG	NA	NA	NA	NA	NA	NA	NA	NA	26030533	26026825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26028926_26030150
ENSMUST00000133826.2	chr13	-	569	4	ISM	ENSMUSG00000021660.15	ENSMUST00000152704.8	888	6	10	3142	-8	-3082	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAGGTTCAGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	98453504	98449546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_98449802_98450146_98450261_98452737_98452807_98453373
ENSMUST00000133910.3	chr7	-	849	2	FSM	ENSMUSG00000087412.5	ENSMUST00000133910.3	849	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TATAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92833383	92828189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_92828866_92833210
ENSMUST00000133989.8	chr14	+	873	4	FSM	ENSMUSG00000055128.16	ENSMUST00000133989.8	873	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTATCCTTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	47069685	47084045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_47069837_47077613_47077754_47083330_47083509_47083641
ENSMUST00000134104.8	chr10	+	2197	17	NIC	ENSMUSG00000044005.14	novel	2573	18	NA	NA	124	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATTATAATTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	128030616	128045803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_+_128030777_128035050_128035151_128035505_128035628_128036041_128036172_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ENSMUST00000134197.2	chr5	+	534	3	FSM	ENSMUSG00000063820.12	ENST00000640821.3	622	3	-4	92	-4	-92	multi-exon	FALSE	canonical	NA	NA	NA	NA	2438	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCATTGCTCGGCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	77154318	77158453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_77154482_77155078_77155255_77158258
ENSMUST00000134230.8	chr11	+	1724	12	NIC	ENSMUSG00000007850.17	novel	3015	13	NA	NA	-6	-601	intron_retention	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATTTTTTAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	50269127	50276750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_50269255_50270294_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ENSMUST00000134310.8	chr2	+	2744	29	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-82119	-30055	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACAAGAAAGGCAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	135501630	135824933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_135501651_135583749_135583808_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135806971_135807008_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895
ENSMUST00000134357.2	chr2	-	686	2	NNC	ENSMUSG00000007659.19	novel	1865	2	NA	NA	14	-1167	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGACAAGGAGATGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	152672572	152671448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_152672023_152672460
ENSMUST00000134479.8	chr19	-	1438	9	FSM	ENSMUSG00000037916.15	ENSMUST00000134479.8	1438	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAACTTTGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	4062666	4057496	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4062550
ENSMUST00000134512.8	chr6	+	1839	5	FSM	ENSMUSG00000086427.9	ENSMUST00000134512.8	1839	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTGTATTCAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	52222222	52226749	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_52222797_52222964_52223181_52223294_52223512_52223642_52223789_52226063
ENSMUST00000134675.8	chr8	+	1692	12	FSM	ENSMUSG00000031626.19	ENSMUST00000134675.8	1692	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGATTTATGAGGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	46111706	46229919	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_46111979_46189189_46189240_46194523_46194617_46198456_46198484_46198822_46198879_46212089_46212229_46216055_46216229_46222865_46222933_46223582_46223628_46225570_46225746_46228625_46228741_46229439
ENSMUST00000134691.2	chr11	-	782	4	ISM	ENSMUSG00000020773.12	ENSMUST00000021120.6	2204	6	2211	640	2202	-640	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGGCCGGCTGGGCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	115998861	115997217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_115997468_115997757_115997833_115998249_115998449_115998603
ENSMUST00000134787.8	chr13	-	1275	3	FSM	ENSMUSG00000085936.8	ENSMUST00000134787.8	1275	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAATCACAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	28705091	28644016	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_28645045_28689688_28689897_28705052
ENSMUST00000134803.2	chr6	+	764	5	ISM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	10704	610	10704	-610	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACGCTGGAAGTAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	125337389	125338837	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125337537_125337672_125337787_125338054_125338084_125338261_125338548_125338649
ENSMUST00000134813.2	chr2	-	629	3	ISM	ENSMUSG00000036890.14	ENSMUST00000049051.13	2197	8	185090	718	185090	-711	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGTGGTGCCACATTGA	NA	NA	NA	NA	NA	NA	NA	NA	44461359	44455144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_44455547_44460430_44460523_44461224
ENSMUST00000134873.9	chr11	+	483	4	FSM	ENSMUSG00000039850.17	ENST00000520284.5	484	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGGGCTGTGGTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	119382610	119393653	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_119382783_119391416_119391530_119393118_119393188_119393524
ENSMUST00000134929.8	chr11	+	2031	4	FSM	ENSMUSG00000110344.2	ENSMUST00000134929.8	2031	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCAATCTTTTTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	90078509	90142081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_90079062_90099809_90099873_90139630_90140562_90141596
ENSMUST00000135074.2	chr2	+	4780	24	FSM	ENSMUSG00000062646.13	ENSMUST00000135074.2	4780	24	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCATGGTCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120235248	120292181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120252505_120252686_120254179_120254226_120258210_120258278_120259281_120259379_120261035_120261217_120261421_120261576_120264102_120264339_120265743_120265871_120267102_120267183_120269780_120269925_120271984_120272082_120274618_120274721_120276779_120277024_120278868_120278934_120281301_120281379_120283073_120283149_120286473_120286588_120287688_120287802_120288523_120288628_120290296
ENSMUST00000135091.2	chr2	-	800	2	FSM	ENSMUSG00000051319.7	ENSMUST00000135091.2	800	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGACCAAAGCCTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	127634408	127633307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_127633753_127634053
ENSMUST00000135131.2	chr12	-	1563	4	FSM	ENSMUSG00000037904.15	ENSMUST00000135131.2	1563	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGGGATCTGCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	110945429	110942862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_110943983_110944097_110944205_110944381_110944562_110945273
ENSMUST00000135140.8	chr1	-	1507	10	NNC	ENSMUSG00000026171.13	novel	1479	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGTGGTATGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	74640531	74632906	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_-_74633562_74633718_74633854_74634367_74634461_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74638005_74638224_74638300_74640483
ENSMUST00000135297.8	chr2	+	370	3	NNC	ENSMUSG00000063714.16	novel	583	3	NA	NA	0	-165	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCAAGCTCTTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	72809767	72818786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_72809940_72817871_72817977_72818693
ENSMUST00000135402.4	chr19	-	2043	4	FSM	ENSMUSG00000084957.4	ENSMUST00000135402.4	2043	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAATCAACAGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	53933058	53918291	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932847
ENSMUST00000135453.2	chr1	+	554	3	ISM	ENSMUSG00000033021.17	ENST00000358215.8	1794	13	6192	2	6192	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	75418809	75419817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr1_+_75418922_75419087_75419257_75419544
ENSMUST00000135454.8	chr4	+	2997	8	FSM	ENSMUSG00000028608.16	ENSMUST00000135454.8	2997	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACCTAGTGATGAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	107747009	107756581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ENSMUST00000135676.2	chr4	-	752	7	NNC	ENSMUSG00000025413.14	novel	935	8	NA	NA	-25	-7399	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGCCATCAAGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	106536088	106527659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_106527733_106528820_106528946_106529024_106529082_106531607_106531686_106533794_106533957_106535381_106535500_106535949
ENSMUST00000135823.8	chr16	-	2676	25	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	99	-1450	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGAGTTTGGGTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	4497542	4446922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr16_-_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453325_4456533_4456676_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ENSMUST00000135913.2	chr3	+	6190	19	FSM	ENSMUSG00000078684.9	ENSMUST00000135913.2	6190	19	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCCACTTTGACGGGC	NA	NA	NA	NA	NA	NA	NA	NA	88682522	88732894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88702770_88702795_88706921_88707026_88715213_88715410_88715859_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725073_88726971_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ENSMUST00000136328.2	chr11	+	1403	4	FSM	ENSMUSG00000040938.17	ENSMUST00000136328.2	1403	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGAGTTCCATTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	70104944	70107243	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70105091_70105330_70105539_70106109_70106878_70106962
ENSMUST00000136353.2	chr11	+	2558	12	NNC	ENSMUSG00000061981.15	novel	2621	11	NA	NA	2320	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	77931129	77951260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_77931158_77940303_77940386_77944188_77944280_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ENSMUST00000136419.8	chr2	-	4546	24	NNC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	4	-3	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	119617981	119594443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608783_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ENSMUST00000136516.9	chr8	+	601	3	FSM	ENSMUSG00000052446.18	ENSMUST00000136516.9	601	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCCTTAGGGAACATAAA	NA	NA	NA	NA	NA	NA	NA	NA	72704910	72722122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_72705005_72719637_72719765_72721742
ENSMUST00000136628.2	chr2	+	471	2	FSM	ENSMUSG00000074754.5	ENSMUST00000136628.2	471	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAGTGTCTTCTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	144435973	144437286	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_144436126_144436967
ENSMUST00000136652.8	chr7	-	756	5	NNC	ENSMUSG00000030615.13	novel	799	5	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAACATTAAAATACTT	NA	NA	NA	NA	NA	NA	NA	NA	90106416	90099907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_90100144_90100750_90100866_90101936_90102109_90104631_90104728_90106279
ENSMUST00000136667.2	chr5	+	481	2	NNC	ENSMUSG00000018965.12	novel	1764	2	NA	NA	2975	-985	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAATTTTTCTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	33179134	33184325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_33179176_33183885
ENSMUST00000136690.3	chr12	-	1063	3	FSM	ENSMUSG00000085622.10	ENSMUST00000136690.3	1063	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTTCATAGATTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	71062606	71056568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_71057254_71061229_71061282_71062280
ENSMUST00000136776.8	chr16	-	2041	14	FSM	ENSMUSG00000003526.13	ENSMUST00000136776.8	2041	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCTTTCTCTTGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	17908067	17889589	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17908006
ENSMUST00000136801.8	chr4	+	1536	5	NNC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	49394	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGTGTCTTTTTAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	120374822	120387381	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_120374904_120379651_120379847_120382194_120382261_120385352_120385496_120386330
ENSMUST00000136893.3	chr11	+	311	1	FSM	ENSMUSG00000024205.8	ENSMUST00000136893.3	311	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2072	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTCCCCCAATAAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	76492144	76492455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_76492100_76492500
ENSMUST00000136914.8	chr11	-	1336	5	FSM	ENSMUSG00000034120.19	ENSMUST00000190993.7	1326	5	0	-10	0	10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAATGTTAAGGAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	116743898	116740869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_116741180_116741681_116741788_116742473_116742578_116742846_116743158_116743393
ENSMUST00000136933.8	chr2	-	2413	10	NNC	ENSMUSG00000005882.19	novel	2183	11	NA	NA	-16	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	4005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCCTGGAATGGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	155771980	155688813	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752388_155753660_155753757_155763554_155763648_155771932
ENSMUST00000136997.2	chr2	-	569	2	ISM	ENSMUSG00000089917.8	ENST00000358711.7	1880	13	12175	-10	12175	-3	intron_retention	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCGTGTGGCAGAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	181211590	181210944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_181211184_181211260
ENSMUST00000137064.8	chr13	-	1258	10	NNC	ENSMUSG00000021460.18	novel	1320	10	NA	NA	10309	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAGTTATACCAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	53073268	52989154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_52989588_52990022_52990202_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234
ENSMUST00000137167.8	chr5	+	1049	8	FSM	ENSMUSG00000041939.15	ENSMUST00000137167.8	1049	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTGGCTGTCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	114582329	114591211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_114582425_114582712_114582751_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940
ENSMUST00000137236.2	chr4	+	1970	3	FSM	ENSMUSG00000085334.8	ENSMUST00000137236.2	1970	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCTTAGGTACTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	126929473	126943191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_126929648_126930355_126930443_126941482
ENSMUST00000137304.8	chr11	-	1271	6	NNC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	115503753	115498743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500416_115502728_115502861_115503610
ENSMUST00000137400.8	chr18	+	444	5	NNC	ENSMUSG00000024608.12	novel	667	4	NA	NA	-523	-84	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTCGAAGAAAAGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	60908787	60911529	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_60908815_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ENSMUST00000137467.8	chrX	+	3390	10	FSM	ENSMUSG00000000134.18	ENSMUST00000137467.8	3390	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	7628933	7641438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_7629453_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUST00000137579.6	chr19	+	741	4	FSM	ENSMUSG00000024845.20	ENSMUST00000137579.6	741	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGTTGCACTTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	4175959	4181731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4176200_4177055_4177132_4181227_4181282_4181360
ENSMUST00000137712.9	chrX	-	2410	22	FSM	ENSMUSG00000025665.17	ENSMUST00000137712.9	2410	22	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGTGCTCTTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	110372802	110299476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110372546
ENSMUST00000137772.8	chr6	+	893	10	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	4778	-3263	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGTCTGTAAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	113237585	113254896	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_113237620_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750
ENSMUST00000137902.2	chr7	-	411	2	NNC	ENSMUSG00000030888.15	novel	3053	7	NA	NA	408	-2288	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTATCAGTATGTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	105385580	105383898	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_105384264_105385534
ENSMUST00000138287.8	chr9	+	759	6	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	-10980	-3478	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGATGCATAAAGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	35111470	35124832	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_35111510_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678
ENSMUST00000138304.8	chr8	+	2307	4	NNC	ENSMUSG00000052446.18	novel	2713	4	NA	NA	-1	-407	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACCTGGTTCCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	72704909	72723770	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_72705005_72719637_72719761_72719943_72720005_72721742
ENSMUST00000138426.2	chr4	+	751	2	FSM	ENSMUSG00000087299.2	ENSMUST00000138426.2	751	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGCTTTACAGGATAAG	NA	NA	NA	NA	NA	NA	NA	NA	116408936	116409824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_116409545_116409681
ENSMUST00000138512.8	chr7	-	854	5	NIC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	3026	-9	intron_retention	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTAATTTCTTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	27746447	27741140	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_27741346_27741525_27741582_27741763_27742152_27742233_27742402_27746410
ENSMUST00000138548.2	chr8	+	1287	6	NNC	ENSMUSG00000031570.18	novel	1483	7	NA	NA	392	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGTGTGTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	26210482	26214914	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_26210511_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
ENSMUST00000138560.2	chr16	-	1654	9	NIC	ENSMUSG00000022960.14	novel	2365	10	NA	NA	62	-563	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTAGGCCCCTGGCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	91485591	91476715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91485294
ENSMUST00000138666.8	chr2	+	534	7	FSM	ENSMUSG00000052533.15	ENSMUST00000138666.8	534	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGTTTCTTGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	30176435	30193822	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192016_30192058_30193671
ENSMUST00000138702.2	chr11	+	534	2	FSM	ENSMUSG00000086442.2	ENSMUST00000138702.2	534	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAATGGCCTACATAG	NA	NA	NA	NA	NA	NA	NA	NA	107372741	107373933	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_107373179_107373836
ENSMUST00000138833.8	chr2	+	782	5	ISM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	378	2104	168	106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATCCAGAGCAGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	31840528	31861350	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
ENSMUST00000138892.2	chr8	+	1738	2	FSM	ENSMUSG00000074247.11	ENSMUST00000138892.2	1738	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTGTGTATTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	71921842	71928742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_71921970_71927131
ENSMUST00000139165.2	chr8	+	399	1	FSM	ENSMUSG00000069862.7	ENSMUST00000139165.2	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTTTGGCTGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	123933361	123933760	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123933400_123933800
ENSMUST00000139167.3	chr5	-	1797	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGCTGATTTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	115479237	115471297	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_115472654_115473525_115473630_115478900
ENSMUST00000139402.3	chr5	-	525	4	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	13143	4297	13143	-4297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGGTAGGGTTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	65580149	65574860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_65574988_65575820_65575952_65577591_65577687_65579977
ENSMUST00000139430.2	chr11	-	608	3	ISM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	13534	190	13534	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGGCTGGCTTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	3202859	3200096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_3200366_3202159_3202283_3202643
ENSMUST00000139517.9	chr15	+	2997	22	FSM	ENSMUSG00000042303.20	ENSMUST00000139517.9	2997	22	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTGTTTTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	80861965	80896491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ENSMUST00000139685.8	chr4	+	2051	4	FSM	ENSMUSG00000028936.16	ENSMUST00000139685.8	2051	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCACTGTGCAAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	152410323	152418528	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
ENSMUST00000139855.8	chr11	-	610	5	NNC	ENSMUSG00000001508.16	novel	1465	10	NA	NA	2787	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTATCGTTTCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	94861502	94853622	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_94853793_94854027_94854226_94859884_94859912_94860179_94860389_94861496
ENSMUST00000140131.8	chr6	+	1446	8	FSM	ENSMUSG00000030330.16	ENSMUST00000140131.8	1446	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	125016722	125025965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024441_125024551_125024755_125024904_125025138_125025201_125025330
ENSMUST00000140267.10	chr19	+	938	7	FSM	ENSMUSG00000024845.20	ENSMUST00000140267.10	938	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	4175958	4181726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
ENSMUST00000140273.2	chr11	+	1657	2	FSM	ENSMUSG00000085636.2	ENSMUST00000140273.2	1657	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAAAGGAAAAGCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	120041387	120043167	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_120041541_120041663
ENSMUST00000140405.10	chr19	+	874	6	NIC	ENSMUSG00000024845.20	novel	1112	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	4175988	4181726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_+_4176200_4177055_4177132_4177548_4177639_4177758_4177836_4181227_4181282_4181360
ENSMUST00000140575.8	chrX	+	788	4	FSM	ENSMUSG00000086316.9	ENSMUST00000140575.8	788	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATGTCCAAATAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	152506585	152524260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_152506934_152508700_152508838_152511857_152511936_152524035
ENSMUST00000140687.2	chr7	-	625	1	FSM	ENSMUSG00000087412.5	ENSMUST00000140687.2	625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	797	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCATGTGTAGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	92828852	92828227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_92828200_92828900
ENSMUST00000140845.2	chrX	+	1673	5	NNC	ENSMUSG00000031367.16	novel	1785	5	NA	NA	72	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAACACTGTGGTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	162694396	162716352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_162694504_162699470_162699580_162700701_162700840_162703901_162703997_162715128
ENSMUST00000141138.8	chr6	-	890	4	NNC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	350	-615	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATGTGATATAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	82629501	82624296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_82625018_82628417_82628460_82629063_82629149_82629459
ENSMUST00000141406.8	chr11	-	864	4	NNC	ENSMUSG00000062825.16	novel	1952	6	NA	NA	6	-696	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	7592	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGTGACATAAAGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	120239295	120237912	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_120238363_120238461_120238702_120238794_120238924_120239250
ENSMUST00000141434.2	chr6	-	244	2	ISM	ENSMUSG00000034312.16	ENST00000618604.4	3232	11	26847	363	26847	-363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCCACCCTCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	90644981	90639793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_90639938_90644881
ENSMUST00000141567.8	chr2	+	754	6	ISM	ENSMUSG00000015094.17	ENST00000371601.5	1407	9	51	1176	23	-1162	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCACTTCACCTTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	25293205	25298327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_25293378_25296226_25296374_25297607_25297749_25297855_25298027_25298125_25298193_25298271
ENSMUST00000141582.2	chr4	-	1371	3	FSM	ENSMUSG00000086272.2	ENSMUST00000141582.2	1371	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGGCTTTGGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	154034960	154032089	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_154033295_154034549_154034644_154034888
ENSMUST00000141654.8	chr11	-	588	5	NNC	ENSMUSG00000057594.13	novel	911	5	NA	NA	135	104	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGGTGTTTGATAGGA	NA	NA	NA	NA	NA	NA	NA	NA	120358291	120356416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_120356648_120356809_120356926_120357479_120357559_120358007_120358067_120358188
ENSMUST00000142029.2	chr4	+	1022	2	FSM	ENSMUSG00000042380.9	ENSMUST00000142029.2	1022	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGGAGTCCTGCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	127137576	127141602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_127137692_127140695
ENSMUST00000142062.8	chr1	+	482	5	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	-1	-294	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGCTCCTGTAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	63216287	63218521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_63216451_63217025_63217036_63217597_63217725_63217990_63218058_63218406
ENSMUST00000142087.2	chr2	-	795	5	FSM	ENSMUSG00000026939.13	ENSMUST00000142087.2	795	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTTCTGTGGGTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	25512017	25510078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_25510543_25511077_25511186_25511386_25511471_25511619_25511687_25511945
ENSMUST00000142127.8	chr2	-	851	6	NIC	ENSMUSG00000051730.16	novel	968	7	NA	NA	18	-16	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	3038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTACTTGTCTCTAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	69715941	69701557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_69701661_69702075_69702126_69704227_69704280_69711110_69711293_69711640_69711756_69715592
ENSMUST00000142241.2	chr19	-	2152	2	FSM	ENSMUSG00000024742.16	ENSMUST00000142241.2	2152	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACCAGAATGTGTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	10181258	10176505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_10178462_10181062
ENSMUST00000142373.2	chr4	+	745	2	FSM	ENSMUSG00000087399.2	ENSMUST00000142373.2	745	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	24792679	24800310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_24792900_24799785
ENSMUST00000142397.2	chr11	+	968	4	FSM	ENSMUSG00000034587.9	ENSMUST00000142397.2	968	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAATATCTCTTATC	NA	NA	NA	NA	NA	NA	NA	NA	3402471	3429831	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_3402741_3421331_3421587_3429259_3429514_3429641
ENSMUST00000142519.3	chr7	+	1153	8	NNC	ENSMUSG00000030588.13	novel	1086	7	NA	NA	75	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGGCCTTCTTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	28937951	28947022	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_28938019_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUST00000142690.2	chr18	-	1256	5	FSM	ENSMUSG00000063889.17	ENSMUST00000142690.2	1256	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTAGTCTTGTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	3337574	3294481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
ENSMUST00000142695.2	chr4	+	785	5	NNC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	18728	-2176	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAACACAAGTGTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	141190693	141192358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_+_141190719_141190983_141191107_141191547_141191783_141191870_141192014_141192099
ENSMUST00000142796.8	chr10	-	1135	3	FSM	ENSMUSG00000020083.14	ENSMUST00000142796.8	1135	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCGGTGAATGACTGAC	NA	NA	NA	NA	NA	NA	NA	NA	61946829	61943988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_61944903_61945662_61945792_61946737
ENSMUST00000142942.8	chr11	+	1840	7	FSM	ENSMUSG00000083844.9	ENSMUST00000142942.8	1840	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTGACATTTAAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	5712149	5734710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_5712241_5715508_5715572_5718885_5719073_5719166_5719244_5730205_5730636_5732184_5732358_5733891
ENSMUST00000142948.8	chr10	-	1961	14	FSM	ENSMUSG00000034758.13	ENSMUST00000142948.8	1961	14	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	81436709	81426737	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431210_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
ENSMUST00000143040.8	chr6	+	882	3	NNC	ENSMUSG00000038451.14	novel	1219	3	NA	NA	-21	-283	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTCAAATATCCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	124785847	124787299	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_124785919_124786189_124786933_124787231
ENSMUST00000143083.3	chr9	+	669	4	FSM	ENSMUSG00000096519.2	ENSMUST00000143083.3	669	4	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3013139	3014344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_3013206_3013209_3013538_3014004_3014157_3014221
ENSMUST00000143097.2	chrX	+	1449	8	FSM	ENSMUSG00000031189.13	ENST00000370458.5	1450	8	-29	30	-29	-30	multi-exon	FALSE	canonical	NA	NA	NA	NA	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTATTTTGCATTAATCT	NA	NA	NA	NA	NA	NA	NA	NA	68404305	68828782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_68404445_68567041_68567163_68588014_68588876_68737549_68737595_68768647_68768685_68769018_68769053_68810787_68810885_68828667
ENSMUST00000143107.2	chr7	+	1158	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCTTTAAATCTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	109118353	109121574	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
ENSMUST00000143111.8	chr4	-	451	3	FSM	ENSMUSG00000028322.12	ENST00000396521.3	603	3	181	-29	181	29	multi-exon	FALSE	canonical	NA	NA	NA	NA	2040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGTTTCCTGGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	45320336	45316793	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_45317029_45319549_45319700_45320270
ENSMUST00000143508.3	chr7	+	318	3	ISM	ENSMUSG00000078681.11	ENST00000347970.7	876	5	-1	4205	-1	-4170	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGACTTGCAGGTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	65343194	65347480	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_+_65343318_65344917_65345076_65347443
ENSMUST00000143521.2	chrX	-	1250	10	NNC	ENSMUSG00000031400.11	novel	2652	13	NA	NA	318	-1376	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAATGAGGCAGTATACAC	NA	NA	NA	NA	NA	NA	NA	NA	73472482	73454464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_-_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456087_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
ENSMUST00000143752.8	chr6	+	2556	16	NNC	ENSMUSG00000029802.14	novel	2178	16	NA	NA	-4	358	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATTGTAAAATGTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	58617544	58669854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_58617613_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666523_58666630_58667515_58667605_58669227
ENSMUST00000143827.8	chr10	+	2176	17	FSM	ENSMUSG00000044005.14	ENST00000623608.3	2271	17	95	0	95	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATTATAATTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	128030587	128045803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_128030777_128035050_128035151_128035505_128035628_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ENSMUST00000143899.2	chr11	-	1059	6	ISM	ENSMUSG00000018736.15	ENST00000402554.7	1832	10	13153	153	13121	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCCTGCAGTTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	68730746	68712935	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr11_-_68713492_68716995_68717031_68720740_68720893_68724179_68724272_68726975_68727150_68730696
ENSMUST00000143992.3	chr9	-	608	3	FSM	ENSMUSG00000045519.16	ENSMUST00000143992.3	608	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTTCTTGTCATATATT	NA	NA	NA	NA	NA	NA	NA	NA	20296473	20263876	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_20264138_20265359_20265546_20296312
ENSMUST00000144075.2	chrX	+	349	3	ISM	ENSMUSG00000019087.14	ENSMUST00000114171.10	2157	10	4761	1456	4761	-1456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGAGCCACTCTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	73345529	73346839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chrX_+_73345628_73345967_73346207_73346827
ENSMUST00000144164.9	chr11	-	3431	5	FSM	ENSMUSG00000020268.15	ENSMUST00000144164.9	3431	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGAGACATTTGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	54751738	54729184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_54732029_54739404_54739487_54741170_54741242_54744052_54744126_54751377
ENSMUST00000144303.2	chr5	-	483	4	ISM	ENSMUSG00000004849.15	ENSMUST00000111080.8	1353	5	93	2403	93	-2403	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGGAGGAGGATTAC	NA	NA	NA	NA	NA	NA	NA	NA	137074896	137066249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_137066410_137070622_137070732_137071917_137072097_137074861
ENSMUST00000144337.2	chr6	-	433	2	FSM	ENSMUSG00000079523.9	ENSMUST00000144337.2	433	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCCATTGAACAGGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	72935382	72934637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_72935008_72935319
ENSMUST00000144395.2	chr2	+	346	5	NNC	ENSMUSG00000015092.10	novel	722	5	NA	NA	215	-218	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGGGAAGGACATCGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	25448150	25451873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_25448179_25450162_25450215_25450551_25450713_25450980_25451075_25451862
ENSMUST00000144509.2	chr7	+	676	5	NNC	ENSMUSG00000038244.15	novel	3187	20	NA	NA	-21579	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTCCTCTCTTCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	111945935	111954401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_111946116_111948600_111948690_111950531_111950635_111953105_111953162_111954153
ENSMUST00000144524.2	chr6	+	885	6	ISM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	8042	706	8042	-706	intron_retention	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCGAGAGGCTGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	125334727	125338741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_+_125334834_125335016_125335096_125337459_125337537_125337672_125337787_125338054_125338084_125338261
ENSMUST00000144662.8	chr19	+	3912	5	FSM	ENSMUSG00000024691.14	ENSMUST00000144662.8	3912	5	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTAGTTATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	12545561	12567132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_12546192_12550877_12550945_12554453_12554535_12561286_12561487_12564198
ENSMUST00000144693.2	chr1	+	3343	8	NNC	ENSMUSG00000026634.17	novel	3562	10	NA	NA	354	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGGACAGAGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	190661042	190679159	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_190661102_190669640_190669898_190671283_190671354_190673070_190673656_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ENSMUST00000144742.6	chr5	+	1466	5	FSM	ENSMUSG00000029177.10	ENSMUST00000144742.6	1466	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGTAAAGTTACTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	30824120	30832174	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ENSMUST00000144950.8	chr3	-	2459	4	FSM	ENSMUSG00000028035.14	ENSMUST00000144950.8	2459	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTATAGTCTTTTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	151915720	151889618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_151891018_151892051_151892621_151899013_151899256_151915471
ENSMUST00000144964.8	chr17	+	3383	16	NIC	ENSMUSG00000002763.17	novel	3200	17	NA	NA	0	0	intron_retention	TRUE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTGTGAGAGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	47022388	47036467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ENSMUST00000145111.8	chr6	-	4486	14	FSM	ENSMUSG00000073067.11	ENSMUST00000145111.8	4486	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGGTACTGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	54407206	54246665	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_54248346_54266785_54266867_54269755_54269904_54272303_54272357_54276915_54277051_54277399_54277440_54277775_54278288_54279540_54279669_54283762_54283991_54284292_54284405_54308841_54308996_54378009_54378174_54380570_54380721_54406305
ENSMUST00000145183.3	chr17	-	992	5	FSM	ENSMUSG00000062753.15	ENSMUST00000145183.3	992	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCCTCCTTGGGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	27784641	27782742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535_27783725_27784218
ENSMUST00000145320.2	chr18	-	2249	11	FSM	ENSMUSG00000024293.17	ENSMUST00000145320.2	2249	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGCTTTTTCTAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	10610109	10566629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10595675_10595876_10596338_10596442_10610025
ENSMUST00000145735.6	chr3	+	881	4	FSM	ENSMUSG00000087260.6	ENSMUST00000145735.6	881	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGGTTCATTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	107186173	107191395	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_107186430_107187185_107187248_107189224_107189343_107190950
ENSMUST00000145900.8	chr17	-	749	6	ISM	ENSMUSG00000003534.18	ENSMUST00000166980.9	3627	18	-2	9565	-2	-9543	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGGGTAAGAGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	36012938	36002026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36012895
ENSMUST00000145971.2	chr10	-	830	4	FSM	ENSMUSG00000087177.8	ENSMUST00000145971.2	830	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTAAGCAGTTTGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	39607978	39515562	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_39515763_39516375_39516508_39521551_39521805_39607733
ENSMUST00000146154.2	chr4	+	770	5	FSM	ENSMUSG00000085614.2	ENSMUST00000146154.2	770	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTAGTCTCTGGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	11966573	11993999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_11966684_11976443_11976588_11977456_11977571_11980141_11980409_11993864
ENSMUST00000146195.2	chr2	+	364	3	NNC	ENSMUSG00000063714.16	novel	583	3	NA	NA	92	-61	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGGTTCTTGGAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	72809859	72818890	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_+_72809940_72817871_72817977_72818711
ENSMUST00000146226.2	chr2	-	385	4	NNC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	1025	-3454	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCCATACGTGGATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	25254669	25253354	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_25253397_25253817_25253842_25254112_25254286_25254523
ENSMUST00000146324.8	chr3	-	1264	5	FSM	ENSMUSG00000050174.16	ENSMUST00000146324.8	1264	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTTTTTCTCTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	37474335	37459058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_37459644_37463656_37463712_37466508_37466565_37470849_37471054_37473971
ENSMUST00000146468.4	chr14	+	1072	6	FSM	ENSMUSG00000050335.18	ENSMUST00000146468.4	1072	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACCCATCGCTTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	47611420	47623251	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_47611580_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ENSMUST00000146553.8	chr2	+	770	3	FSM	ENSMUSG00000086454.8	ENSMUST00000146553.8	770	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAACCTGTTCAGACATG	NA	NA	NA	NA	NA	NA	NA	NA	104389507	104398401	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_104389830_104390068_104390321_104398205
ENSMUST00000146629.3	chr14	-	789	6	FSM	ENSMUSG00000015759.12	ENSMUST00000146629.3	789	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCTCTGGTGTTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	47025791	47013743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021282_47021331_47021568_47021638_47025639
ENSMUST00000146760.7	chr7	-	1075	9	FSM	ENSMUSG00000110206.2	ENSMUST00000146760.7	1075	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGCGTGCCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	44785856	44780612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44780856_44781492_44781562_44781651_44781837_44783305_44783451_44783796_44783941_44784545_44784600_44785087_44785202_44785441_44785509_44785802
ENSMUST00000146863.2	chr8	+	531	3	FSM	ENSMUSG00000038005.16	ENSMUST00000146863.2	531	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCTCTTCTAGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	61343451	61360609	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_61343571_61358581_61358755_61360370
ENSMUST00000146867.2	chr17	+	962	5	FSM	ENSMUSG00000044533.16	ENSMUST00000146867.2	962	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGTTTTTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	24939224	24940899	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_24939427_24939507_24939706_24939942_24940277_24940596_24940702_24940776
ENSMUST00000146972.3	chr8	+	365	4	NNC	ENSMUSG00000031848.16	novel	925	5	NA	NA	-6	-403	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCGGCGCTGGCCGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	71126028	71130766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_71126108_71129204_71129247_71130427_71130509_71130603
ENSMUST00000146980.2	chr2	+	412	4	FSM	ENSMUSG00000084762.2	ENSMUST00000146980.2	412	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTCTGAGCCCAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	135490826	135493983	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_135490892_135491052_135491123_135493417_135493478_135493766
ENSMUST00000147117.8	chr16	+	1947	10	FSM	ENSMUSG00000022884.17	ENSMUST00000168891.8	2203	10	275	-19	-4	19	multi-exon	FALSE	canonical	NA	NA	NA	NA	2573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACCAAAAAAAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	22926503	22932886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ENSMUST00000147125.2	chr7	+	1582	3	NNC	ENSMUSG00000038797.14	novel	1871	4	NA	NA	29	-496	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCTTCAGCCAGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	80510700	80525636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_80510826_80512915_80513420_80524683
ENSMUST00000147139.2	chr3	+	1932	4	FSM	ENSMUSG00000048332.14	ENSMUST00000147139.2	1932	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTGAGTCACCGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	52949003	53169100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_52949102_52950566_52951113_53139150_53139250_53167911
ENSMUST00000147165.8	chr4	+	1964	10	NIC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGCTGCATTGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	122910389	122948742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122946276_122946395_122947915
ENSMUST00000147196.3	chr10	-	860	4	FSM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTCACCGGAGCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	43416964	43401128	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_43401405_43406593_43406667_43408671_43409154_43416935
ENSMUST00000147311.2	chr17	-	333	1	FSM	ENSMUSG00000067575.6	ENSMUST00000147311.2	333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAATGGAGAGTAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	29356278	29355945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_29355900_29356300
ENSMUST00000147394.8	chr9	+	452	5	NNC	ENSMUSG00000036781.14	novel	575	5	NA	NA	75	-44	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTATTTTGGTGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	66853447	66856750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_66853463_66854112_66854222_66854868_66854980_66855922_66856000_66856610
ENSMUST00000147532.8	chr17	-	1447	11	FSM	ENSMUSG00000051977.17	ENSMUST00000147532.8	1447	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAACAAGCATTTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	15784602	15773485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_15773808_15774949_15775018_15775348_15775621_15775827_15775930_15777562_15777720_15777808_15777837_15779284_15779335_15782676_15782785_15783075_15783200_15783482_15783594_15784497
ENSMUST00000147570.3	chr2	-	1133	8	NNC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	0	-133	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCCCTCCAAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	130021323	130013706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018548_130018673_130018934_130019087_130021153
ENSMUST00000147571.8	chr1	-	1360	6	FSM	ENSMUSG00000026049.12	ENSMUST00000147571.8	1360	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTCAGACTAATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	44141522	44125969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059
ENSMUST00000147632.3	chr13	+	555	3	FSM	ENSMUSG00000071451.11	ENSMUST00000147632.3	555	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATTTTACTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34346946	34362156	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_34347233_34350043_34350120_34361963
ENSMUST00000147710.2	chr11	+	581	6	NNC	ENSMUSG00000018672.16	novel	930	9	NA	NA	4255	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1027	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCCTTTCTTGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	96744956	96752029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_+_96744976_96745409_96745466_96746085_96746160_96747497_96747550_96748378_96748418_96751688
ENSMUST00000147762.9	chr11	-	611	4	FSM	ENSMUSG00000085156.9	ENSMUST00000147762.9	611	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	6478779	6475590	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_6475818_6476354_6476438_6478305_6478375_6478547
ENSMUST00000147802.9	chr10	+	3291	11	FSM	ENSMUSG00000020175.16	ENSMUST00000147802.9	3291	11	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGTGTGATGAGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	74872897	74890580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_74873154_74874271_74874353_74877671_74877764_74880302_74880369_74881863_74881966_74884280_74884346_74885727_74885780_74886469_74886552_74886821_74886913_74887749_74887876_74888302
ENSMUST00000147881.8	chr7	-	728	7	FSM	ENSMUSG00000025724.13	ENST00000560266.5	1057	7	-57	386	2	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACACACGTTGGCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	80597259	80565510	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_80565653_80565922_80565981_80572094_80572133_80572848_80572969_80577484_80577635_80584774_80584885_80597149
ENSMUST00000147979.3	chr6	-	613	7	ISM	ENSMUSG00000000441.18	ENST00000442415.7	2991	18	43522	4933	42969	-4933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGACCCAACTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	115609956	115600483	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr6_-_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115607601_115607662_115608175_115608330_115609857
ENSMUST00000148095.2	chr3	-	1045	5	NNC	ENSMUSG00000027953.14	novel	1022	6	NA	NA	1	-2	intron_retention	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCAGAGTGATGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	89177876	89175554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177447_89177777
ENSMUST00000148159.3	chr18	+	1921	2	FSM	ENSMUSG00000062210.14	ENSMUST00000148159.3	1921	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGGATTTAGATTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	50186348	50224849	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_50186687_50223266
ENSMUST00000148201.8	chr1	+	1150	9	FSM	ENSMUSG00000026418.17	ENSMUST00000148201.8	1150	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTCTGTAGCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	135727570	135738727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_135727759_135730331_135730362_135731019_135731024_135732790_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ENSMUST00000148235.8	chr8	-	1459	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTTGCAGAGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	117648194	117615423	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
ENSMUST00000148248.3	chr2	+	535	5	ISM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	5417	348	5088	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGACTTCTCAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	13584179	13587289	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_+_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
ENSMUST00000148263.3	chr11	-	912	9	FSM	ENSMUSG00000018425.19	ENST00000587125.1	914	9	-3	5	-3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACTGCTGTGGCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	86691914	86666485	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86680311_86680399_86683987_86684088_86689747_86689815_86690398_86690474_86691794
ENSMUST00000148269.2	chr3	-	673	4	NNC	ENSMUSG00000040774.16	novel	2020	9	NA	NA	-12	-17050	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTTGGTTCTGGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	106455059	106427348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_106427396_106440670_106440819_106446505_106446920_106454995
ENSMUST00000148562.8	chr16	+	575	5	ISM	ENSMUSG00000022832.12	ENST00000251776.8	843	6	-27	1399	-27	-1399	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGATTCCTTTCAGCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	34470290	34497571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_34470392_34487053_34487182_34490266_34490385_34491470_34491633_34497505
ENSMUST00000148601.2	chr11	-	3538	13	NIC	ENSMUSG00000020777.17	novel	3743	14	NA	NA	9226	0	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGTTACGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	116080401	116062713	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116080240
ENSMUST00000148612.2	chr4	-	641	3	ISM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	10069	1686	10069	-1686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGAGCGTCCCGTCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	133263238	133261538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_133261854_133262820_133262887_133262978
ENSMUST00000148633.4	chr5	+	2251	8	FSM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACATTCCATAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	8106526	8119151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
ENSMUST00000148721.8	chr17	-	1293	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148721.8	1293	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGTTTTCACGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	36208323	36203568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36208082
ENSMUST00000149061.3	chr7	+	783	5	NIC	ENSMUSG00000005566.15	novel	2582	15	NA	NA	4210	-1099	intron_retention	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTAACCAGTGCGAAT	NA	NA	NA	NA	NA	NA	NA	NA	12762698	12763853	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_12762706_12762807_12762915_12763014_12763180_12763269_12763523_12763602
ENSMUST00000149322.8	chr9	-	2188	14	FSM	ENSMUSG00000032527.14	ENSMUST00000149322.8	2188	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTGTTGTTTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	100916930	100864084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
ENSMUST00000149462.2	chr13	-	677	4	ISM	ENSMUSG00000025869.12	ENSMUST00000148222.2	790	6	82	703	20	-703	intron_retention	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGCCAGGCTGTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	54737789	54733051	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475
ENSMUST00000149485.2	chr10	-	753	7	NIC	ENSMUSG00000019868.17	novel	1974	8	NA	NA	101	-452	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	869	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGTGCCCTGCAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	14581203	14531531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr10_-_14531590_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
ENSMUST00000149487.2	chr9	+	1001	2	FSM	ENSMUSG00000036091.9	ENST00000359051.7	1235	2	5	229	5	-171	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGCGATGTCATGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	107461950	107463860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107462865_107463773
ENSMUST00000149514.8	chrX	+	775	3	FSM	ENSMUSG00000086316.9	ENSMUST00000149514.8	775	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGACCCCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	152506622	152512184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_152506934_152508700_152508838_152511857
ENSMUST00000149575.8	chr4	-	523	4	ISM	ENSMUSG00000066196.12	ENST00000484764.5	1194	6	964	10	964	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTAATTCATTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	43652159	43651334	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr4_-_43651655_43651746_43651792_43651927_43652043_43652116
ENSMUST00000149684.2	chr5	+	673	5	ISM	ENSMUSG00000005514.15	ENSMUST00000122113.8	2606	15	42392	1411	42392	-1411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTAAGGTGAAGGGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	135760403	135762769	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626
ENSMUST00000149796.2	chr4	-	1803	8	NNC	ENSMUSG00000029048.4	novel	1596	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTCGTCTACACGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	155170828	155158566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167775_155170661
ENSMUST00000150038.2	chr19	+	3332	2	FSM	ENSMUSG00000064032.3	ENSMUST00000150038.2	3332	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAAGGTTATCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	10175731	10179748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_10175869_10176553
ENSMUST00000150145.2	chr2	+	1905	2	FSM	ENSMUSG00000085704.2	ENSMUST00000150145.2	1905	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	179618645	179620806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_179618986_179619241
ENSMUST00000150268.8	chr3	+	1851	15	FSM	ENSMUSG00000027998.12	ENSMUST00000150268.8	1851	15	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGCATGTTGAGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	82962828	82979662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
ENSMUST00000150336.8	chr11	-	1605	8	FSM	ENSMUSG00000005267.14	ENSMUST00000150336.8	1605	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATTTCTGAGCAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	62622711	62591181	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_62591453_62596294_62596418_62602975_62603046_62615622_62615710_62616073_62616201_62618375_62618480_62619107_62619712_62622492
ENSMUST00000150350.9	chr7	-	1047	8	FSM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATGTGTGCTGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	44778185	44774981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ENSMUST00000150500.8	chr17	+	516	5	NNC	ENSMUSG00000073435.11	novel	715	5	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCAGTCAGCATTACCA	NA	NA	NA	NA	NA	NA	NA	NA	25115478	25116309	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_25115534_25115608_25115733_25115825_25115928_25116001_25116115_25116187
ENSMUST00000150571.2	chr2	+	2151	8	FSM	ENSMUSG00000017999.17	ENSMUST00000150571.2	2151	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATAGTATTATTTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	166857229	166867733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303
ENSMUST00000150602.2	chr2	+	788	4	FSM	ENSMUSG00000047459.15	ENSMUST00000150602.2	788	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAATCAGTTCGCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	155078527	155092055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_155078857_155084650_155084727_155089690_155089859_155091840
ENSMUST00000150681.3	chr7	+	623	4	NNC	ENSMUSG00000018995.13	novel	3778	14	NA	NA	84070	13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAGCTAGTGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	96689210	96712179	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_96689244_96706654_96706753_96708992_96709081_96711775
ENSMUST00000150749.2	chr1	-	711	2	FSM	ENSMUSG00000087213.3	ENSMUST00000150749.2	711	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACAGTGCTACCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	64729818	64719029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_64719545_64729622
ENSMUST00000150953.2	chr9	+	4325	2	FSM	ENSMUSG00000086296.3	ENSMUST00000150953.2	4325	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTAATTGGACGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	106032150	106036950	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_106033717_106034191
ENSMUST00000150974.2	chr4	-	761	3	NIC	ENSMUSG00000034785.16	novel	1690	4	NA	NA	-17	12	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	4572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAAATAAAGCAATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	107164339	107149363	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_-_107149620_107154793_107154938_107163978
ENSMUST00000151032.2	chr11	+	1075	4	FSM	ENSMUSG00000086391.2	ENSMUST00000151032.2	1075	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGTAAATATTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	11818122	11835321	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_11818200_11820963_11821157_11832956_11833080_11834639
ENSMUST00000151034.9	chr11	+	937	7	NIC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	631	-255	intron_retention	FALSE	canonical	NA	NA	NA	NA	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCACTCCTGGGCTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	70538900	70541917	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr11_+_70538936_70540046_70540173_70540270_70540359_70540500_70540844_70540951_70541046_70541589_70541671_70541747
ENSMUST00000151120.9	chr7	-	2127	9	FSM	ENSMUSG00000007891.17	ENSMUST00000151120.9	2127	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTGCTCTGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	141941775	141929647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ENSMUST00000151149.2	chr6	+	930	5	NNC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	13702	-111	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTCAGCAAAACCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	113246509	113258048	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_113246521_113246692_113246832_113247482_113247663_113254791_113254907_113257563
ENSMUST00000151239.2	chr2	-	592	5	NIC	ENSMUSG00000047617.12	novel	981	7	NA	NA	63	-333	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCCAGGGGAGTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	25351043	25349826	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr2_-_25349872_25350178_25350370_25350456_25350507_25350666_25350728_25350798
ENSMUST00000151266.8	chr16	+	1086	5	FSM	ENSMUSG00000003531.16	ENSMUST00000151266.8	1086	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTTCCTAGTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	17884266	17889227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887954_17888096_17888741
ENSMUST00000151307.8	chr19	+	3687	4	FSM	ENSMUSG00000024691.14	ENSMUST00000151307.8	3687	4	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTTTTCTTTAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	12545561	12567124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_12546192_12550894_12550945_12554453_12554535_12564198
ENSMUST00000151374.2	chr4	-	426	3	FSM	ENSMUSG00000085241.8	ENSMUST00000151374.2	426	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	132080944	132079244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_132079555_132079930_132080010_132080907
ENSMUST00000151376.3	chr9	+	651	4	FSM	ENSMUSG00000091028.2	ENSMUST00000151376.3	651	4	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3000921	3002330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_3000958_3000961_3001445_3002049_3002057_3002205
ENSMUST00000151401.11	chr19	+	800	5	FSM	ENSMUSG00000024845.20	ENSMUST00000151401.11	800	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	4175974	4181726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4181227_4181282_4181360
ENSMUST00000151678.8	chr11	-	4084	3	FSM	ENSMUSG00000003518.14	ENSMUST00000151678.8	4084	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTCTGTTTTGTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	101874329	101861968	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_101865766_101872442_101872670_101874269
ENSMUST00000151702.8	chrX	+	648	7	NNC	ENSMUSG00000008682.14	novel	799	7	NA	NA	-3	-110	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGTGGTCCTCTGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	73314462	73316631	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_73314485_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ENSMUST00000151708.3	chr1	-	491	4	FSM	ENSMUSG00000026385.17	ENSMUST00000151708.3	491	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAATGTAGATGATATGG	NA	NA	NA	NA	NA	NA	NA	NA	120048667	120041129	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_120041264_120044115_120044179_120047624_120047743_120048491
ENSMUST00000151793.8	chr7	-	3302	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACGGGACAAGGAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	44198262	44182209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ENSMUST00000151796.3	chr6	-	642	6	NNC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	857	-2986	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGATCCCACCGCACGCT	NA	NA	NA	NA	NA	NA	NA	NA	128414616	128410724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128414572
ENSMUST00000151953.2	chr2	+	492	2	FSM	ENSMUSG00000005232.12	ENST00000421979.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTTCCTTCGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	69050371	69057180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_69050595_69056911
ENSMUST00000152075.8	chr1	+	1038	9	FSM	ENSMUSG00000026418.17	ENSMUST00000152075.8	1038	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTCTGTAGCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	135727158	135738727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_135727235_135730331_135730362_135731019_135731024_135732790_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ENSMUST00000152109.2	chrX	-	698	3	FSM	ENSMUSG00000087365.8	ENSMUST00000152109.2	698	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAGAAATGGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	52146065	52144646	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_52145042_52145534_52145647_52145874
ENSMUST00000152208.8	chr1	+	1105	10	FSM	ENSMUSG00000026418.17	ENSMUST00000152208.8	1105	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTCTGTAGCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	135727139	135738727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_135727235_135727710_135727759_135730331_135730362_135731019_135731024_135732790_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ENSMUST00000152251.8	chr4	-	3531	15	NIC	ENSMUSG00000028467.16	novel	3544	17	NA	NA	336	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTGGTGTGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	43578537	43566927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569956_43570036_43570449_43570671_43570912_43571188_43571408_43573750_43573867_43574027_43574120_43578015
ENSMUST00000152286.2	chr13	+	465	3	FSM	ENSMUSG00000021643.16	ENSMUST00000152286.2	465	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTATTGGTGAATATTA	NA	NA	NA	NA	NA	NA	NA	NA	100244903	100250739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_100244993_100245530_100245640_100250472
ENSMUST00000152471.2	chr2	+	1243	2	FSM	ENSMUSG00000050373.14	ENSMUST00000152471.2	1243	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	164627936	164629552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_164628245_164628617
ENSMUST00000152507.8	chr19	-	1937	11	FSM	ENSMUSG00000025089.16	ENSMUST00000152507.8	1937	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTTGTAACCTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	58443733	58226593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_58226979_58227685_58227740_58252343_58252526_58255430_58255566_58258485_58258596_58288673_58289011_58381004_58381020_58440400_58440485_58441595_58441890_58442740_58443027_58443678
ENSMUST00000152681.8	chr14	+	2624	15	NNC	ENSMUSG00000022214.16	novel	2193	15	NA	NA	22	-1	intron_retention	FALSE	canonical	NA	NA	NA	NA	1199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTCTGTGTCTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	55797990	55807518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_55798085_55798531_55798877_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUST00000152704.8	chr13	-	888	6	FSM	ENSMUSG00000021660.15	ENSMUST00000152704.8	888	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	98453514	98446404	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453373
ENSMUST00000152784.8	chr11	-	686	3	FSM	ENSMUSG00000085175.8	ENSMUST00000152784.8	686	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTTCATTATGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	82671868	82670426	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_82670762_82670960_82671125_82671681
ENSMUST00000152877.8	chr6	+	1277	11	NIC	ENSMUSG00000029670.13	novel	3800	12	NA	NA	28	-1177	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAACTCCAGCTCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	21949683	21973725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_+_21949793_21950036_21950109_21952127_21952229_21953761_21953828_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ENSMUST00000152913.8	chr12	+	1583	12	NNC	ENSMUSG00000021235.14	novel	1776	13	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTCTTTTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	84408803	84420566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418177_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ENSMUST00000152936.8	chr19	-	604	4	FSM	ENSMUSG00000016495.13	ENSMUST00000152936.8	604	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAATTTCTCGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	29339273	29326076	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_29326406_29335716_29335804_29338216_29338328_29339196
ENSMUST00000152938.9	chr8	-	785	6	FSM	ENSMUSG00000048967.17	ENSMUST00000152938.9	785	6	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGCCTCTTTTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	70346625	70340437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_70340673_70341636_70341788_70341858_70341973_70342092_70342204_70343515_70343625_70346560
ENSMUST00000152941.2	chr2	-	1198	4	FSM	ENSMUSG00000078897.11	ENSMUST00000152941.2	1198	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTCTTCCTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	175277575	175265685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_175266617_175266821_175266949_175273972_175274028_175277490
ENSMUST00000153275.2	chr16	-	356	2	ISM	ENSMUSG00000033918.17	ENSMUST00000048642.15	1348	10	26	18304	26	-18304	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGCCACTGCTATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	20121111	20116873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_-_20117077_20120958
ENSMUST00000153474.9	chr4	+	606	5	FSM	ENSMUSG00000086290.10	ENSMUST00000153474.9	606	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	132035988	132038335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_132036219_132037148_132037215_132037461_132037527_132037761_132037816_132038144
ENSMUST00000153528.8	chr8	+	1026	7	FSM	ENSMUSG00000013878.19	ENSMUST00000153528.8	1026	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAGGATCCATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	26609410	26631152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_26609629_26610467_26610592_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
ENSMUST00000153620.3	chrX	+	830	5	FSM	ENSMUSG00000031156.19	ENST00000376529.8	837	5	14	-7	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTGGGTTGGAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	7750585	7760699	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758968_7759107_7760429
ENSMUST00000153627.8	chr12	+	2036	16	FSM	ENSMUSG00000021177.17	ENSMUST00000153627.8	2036	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACAGGCCTGGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	99850795	99921478	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ENSMUST00000153670.2	chr12	+	527	3	ISM	ENSMUSG00000064215.14	ENSMUST00000085065.12	977	7	3368	0	3368	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCATTGTTCCCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	103403885	103406498	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_103403965_103405659_103405822_103406212
ENSMUST00000153684.8	chr11	+	1797	5	FSM	ENSMUSG00000018572.11	ENSMUST00000153684.8	1797	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTGTCCTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	69887816	69890834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_69887886_69888422_69888455_69888571_69888665_69889126_69889959_69890063
ENSMUST00000153892.2	chr11	-	1051	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTCTTTATTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	115427102	115413927	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
ENSMUST00000153970.8	chr9	+	1979	7	NNC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	61	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	810	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTTGTAATTATTG	NA	NA	NA	NA	NA	NA	NA	NA	55116269	55131715	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_55116403_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ENSMUST00000154032.2	chr15	-	2456	11	FSM	ENSMUSG00000036966.16	ENSMUST00000154032.2	2456	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACGGAAGGGGAATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	102044669	102024962	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
ENSMUST00000154043.8	chr12	-	1929	9	FSM	ENSMUSG00000021224.16	ENSMUST00000154043.8	1929	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTCTGTGACAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	83889117	83842212	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991
ENSMUST00000154111.8	chr2	-	2293	9	FSM	ENSMUSG00000078919.11	ENSMUST00000154111.8	2293	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAATGTTATCGAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	168072299	168050967	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ENSMUST00000154135.8	chr18	-	2530	8	FSM	ENSMUSG00000063889.17	ENSMUST00000154135.8	2530	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGTGTGTATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	3337488	3266355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_3268130_3273421_3273579_3276693_3276730_3295039_3295183_3295321_3295417_3325360_3325479_3327493_3327592_3337379
ENSMUST00000154219.8	chr3	+	1945	13	NIC	ENSMUSG00000027810.15	novel	2299	14	NA	NA	235	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	58433476	58464922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_+_58433508_58438507_58438578_58444954_58445030_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ENSMUST00000154241.8	chr5	-	1724	8	FSM	ENSMUSG00000107283.4	ENSMUST00000154241.8	1724	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTTTAGCAGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	31311595	31297997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
ENSMUST00000154452.2	chr11	+	760	2	FSM	ENSMUSG00000084835.2	ENSMUST00000154452.2	760	2	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGCCCTCTGCCGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	98328862	98329872	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_98329543_98329792
ENSMUST00000154477.8	chr15	-	1905	8	NNC	ENSMUSG00000022552.17	novel	1734	9	NA	NA	64	-1	intron_retention	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTTCTGTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	76235247	76231240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232008_76232095_76232205_76232285_76232423_76232500_76232636_76234254
ENSMUST00000154553.2	chr17	+	1049	8	FSM	ENSMUSG00000073468.13	ENSMUST00000154553.2	1049	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGGATCAACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	8529933	8546274	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
ENSMUST00000154660.2	chr16	+	888	10	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	2000	2506	2000	-2506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGGCGTGGATTGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	20369326	20377623	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446
ENSMUST00000154853.8	chr7	-	883	5	FSM	ENSMUSG00000035642.17	ENSMUST00000154853.8	883	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGTTGAGAGCATTAG	NA	NA	NA	NA	NA	NA	NA	NA	97228703	97199546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97224794_97224899_97228572
ENSMUST00000154883.4	chr6	-	1552	6	NIC	ENSMUSG00000023456.17	novel	1607	7	NA	NA	138	-1	intron_retention	FALSE	canonical	NA	NA	NA	NA	9506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTTTGTCCCAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	124791121	124787549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789877_124790970
ENSMUST00000154955.2	chr3	+	2478	16	NNC	ENSMUSG00000045934.16	novel	2778	17	NA	NA	452	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTATTTTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	96069905	96079034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_96070037_96070493_96070531_96070784_96070846_96070984_96071128_96071564_96071644_96071749_96071886_96072102_96072191_96072313_96072403_96072487_96072613_96075127_96075195_96075388_96075460_96075914_96076082_96076351_96076526_96077122_96077306_96077668_96077963_96078401
ENSMUST00000154972.9	chr11	-	1049	5	FSM	ENSMUSG00000014195.17	ENSMUST00000154972.9	1049	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTCCTTTTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	100510446	100488252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100488881_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ENSMUST00000155008.2	chr9	+	481	1	FSM	ENSMUSG00000066443.6	ENSMUST00000155008.2	481	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGTACACAAAGAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	88272889	88273370	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_88272900_88273400
ENSMUST00000155071.9	chr17	-	712	5	FSM	ENSMUSG00000052146.17	ENSMUST00000155071.9	712	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGACCCGAAACAGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	27854202	27849942	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27854177
ENSMUST00000155364.8	chr17	+	958	5	FSM	ENSMUSG00000023861.18	ENSMUST00000155364.8	958	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGTGTGACTATATAT	NA	NA	NA	NA	NA	NA	NA	NA	8502593	8516493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_8502794_8512246_8512251_8515366_8515464_8515655_8515789_8515969
ENSMUST00000155480.9	chr12	-	1970	7	FSM	ENSMUSG00000076432.14	ENSMUST00000155480.9	1970	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTATTATGGCTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	21467589	21440332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_21441417_21441717_21441801_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ENSMUST00000155622.8	chrX	-	773	4	FSM	ENSMUSG00000087365.8	ENSMUST00000155622.8	773	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTGTCCATTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	52146067	52143922	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_52144368_52145018_52145042_52145534_52145647_52145874
ENSMUST00000155671.8	chr5	+	2716	4	FSM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTGTATGGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	122492431	122503047	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867
ENSMUST00000155672.8	chr7	+	1938	8	FSM	ENSMUSG00000041769.14	ENSMUST00000155672.8	1938	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	138448323	138484783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ENSMUST00000155679.8	chr9	+	3088	16	FSM	ENSMUSG00000031918.17	ENSMUST00000155679.8	3088	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCCACAGTTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	13660476	13717777	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_13660697_13671713_13671785_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUST00000155837.8	chr2	-	2120	18	NNC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-9	-405	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	156022096	155989859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ENSMUST00000155954.3	chr11	+	2181	2	FSM	ENSMUSG00000050538.9	ENSMUST00000155954.3	2181	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAACAAACAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	97732125	97734925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_97732391_97733009
ENSMUST00000155966.8	chr16	-	963	6	FSM	ENSMUSG00000023791.19	ENSMUST00000155966.8	963	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCTCTTTTCAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	31918546	31903255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918293
ENSMUST00000155969.8	chr14	-	510	2	ISM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	6030	0	6030	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTTCTCATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	55977117	55976476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_55976878_55977008
ENSMUST00000156291.2	chr19	-	2373	3	FSM	ENSMUSG00000024742.16	ENSMUST00000156291.2	2373	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCTGAATGTTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	10181533	10176495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_10178462_10181051_10181384_10181458
ENSMUST00000156392.8	chr1	-	1122	6	FSM	ENSMUSG00000026049.12	ENSMUST00000156392.8	1122	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGTGCCTTTGTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	44141598	44125775	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139082_44141487
ENSMUST00000156400.9	chr18	+	1649	4	FSM	ENSMUSG00000024571.16	ENSMUST00000156400.9	1649	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTGGGAATTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	80249979	80255956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_80250117_80250444_80250559_80253276_80253346_80254627
ENSMUST00000156473.8	chrX	-	1114	6	FSM	ENSMUSG00000046032.17	ENSMUST00000156473.8	1114	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTCAGCTAGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	100266159	100141391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_100141834_100145973_100146042_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ENSMUST00000156675.8	chr1	+	531	5	NNC	ENSMUSG00000062590.14	novel	2160	21	NA	NA	42503	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATTCTCTTTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	86130217	86180211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_86130287_86135674_86135766_86140774_86140828_86172287_86172393_86179998
ENSMUST00000156688.2	chr2	-	472	2	ISM	ENSMUSG00000007659.19	ENST00000420488.6	2414	3	18	49068	8	-1395	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGATTCCCATGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	152673630	152671676	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr2_-_152672041_152673522
ENSMUST00000159018.8	chr5	+	741	6	FSM	ENSMUSG00000038722.18	ENSMUST00000159018.8	741	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATTCTTTCTTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	145077217	145084884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_145077253_145078114_145078171_145079257_145079378_145081708_145081832_145083252_145083420_145084644
ENSMUST00000159050.8	chr9	+	2304	20	FSM	ENSMUSG00000032280.17	ENSMUST00000159050.8	2304	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGACTCTAACAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	61280719	61323998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ENSMUST00000159099.8	chr9	-	1201	6	FSM	ENSMUSG00000001366.15	ENSMUST00000159099.8	1201	6	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTTTCATATTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	78015886	78002794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78015572
ENSMUST00000159209.8	chr15	+	944	10	FSM	ENSMUSG00000023010.16	ENSMUST00000159209.8	944	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCACCCCCCCACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	99291099	99306416	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_99291265_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUST00000159311.8	chr1	+	1816	7	FSM	ENSMUSG00000025979.14	ENSMUST00000159311.8	1816	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGCCGGGCGGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	55170389	55193097	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_55170519_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ENSMUST00000159327.2	chr15	+	2186	3	FSM	ENSMUSG00000022346.18	ENSMUST00000159327.2	2186	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTCTTTTTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	61857412	61862223	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_61857801_61859358_61860128_61861194
ENSMUST00000159389.8	chr18	-	2662	10	FSM	ENSMUSG00000038425.19	ENSMUST00000159389.8	2662	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	70663209	70641755	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658531_70659627_70659793_70661772_70661899_70662821
ENSMUST00000159407.3	chr1	+	388	2	FSM	ENSMUSG00000089812.3	ENSMUST00000159407.3	388	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1372	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCAAGTCATTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	192537230	192538554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_192537387_192538322
ENSMUST00000159545.8	chr4	-	2754	23	NIC	ENSMUSG00000028559.18	novel	2871	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	109059431	108918851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109029470_109029522_109059301
ENSMUST00000159551.8	chr17	-	2060	8	FSM	ENSMUSG00000060475.14	ENSMUST00000159551.8	2060	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTTTTCCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	13211384	13185682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
ENSMUST00000159554.7	chr3	+	486	4	FSM	ENSMUSG00000074604.10	ENSMUST00000159554.7	486	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGCTGTGGCTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	51568634	51590096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_51568728_51571931_51572032_51584985_51585057_51589874
ENSMUST00000159619.8	chr5	-	2088	18	FSM	ENSMUSG00000025533.16	ENSMUST00000159619.8	2088	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTTCTGCCTGTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	130058088	130040335	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130053203_130053917_130053975_130057821
ENSMUST00000159663.8	chr1	+	346	8	FSM	ENSMUSG00000053332.14	ENSMUST00000159663.8	346	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	160862735	160866109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160865794_160865843_160866026
ENSMUST00000159706.8	chr1	+	557	11	FSM	ENSMUSG00000053332.14	ENSMUST00000159706.8	557	11	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	160862636	160866107	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUST00000159759.3	chr19	+	1528	2	FSM	ENSMUSG00000047423.11	ENSMUST00000159759.3	1528	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACACTGTCCTGATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	5475171	5477341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5475337_5475978
ENSMUST00000159814.2	chr1	-	3997	1	FSM	ENSMUSG00000049866.13	ENSMUST00000159814.2	3997	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGGAGGCGTTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	88629943	88625946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_88625900_88629900
ENSMUST00000159924.8	chr7	-	805	9	FSM	ENSMUSG00000009687.15	ENSMUST00000159924.8	805	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGGCCTCTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30741503	30732157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30737245_30737354_30738462_30738520_30739607_30739683_30740821_30740883_30741471
ENSMUST00000160052.2	chr9	+	444	1	FSM	ENSMUSG00000090136.5	ENSMUST00000160052.2	444	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	843	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAATGGGGCAAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	37164217	37164661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_37164200_37164700
ENSMUST00000160085.2	chr12	-	676	4	FSM	ENSMUSG00000054302.16	ENSMUST00000160085.2	676	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCAATAACCTTATCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	54742647	54736895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_54737142_54738784_54738881_54739559_54739742_54742495
ENSMUST00000160269.2	chr17	+	763	5	NNC	ENSMUSG00000024146.10	novel	1184	5	NA	NA	61	-338	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAATGAGCAGCACCTTA	NA	NA	NA	NA	NA	NA	NA	NA	87333038	87342900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_87333082_87335126_87335193_87338435_87338491_87341683_87341788_87342405
ENSMUST00000160407.8	chr15	-	496	4	ISM	ENSMUSG00000022635.10	ENSMUST00000162160.8	850	8	7118	13	7118	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTGTGGAATAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	93289064	93283990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_93284165_93285457_93285534_93285627_93285741_93288931
ENSMUST00000160422.8	chr5	+	1756	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160422.8	1756	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	NA	NA	NA	NA	NA	NA	NA	145104056	145118850	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115567_145115739_145117945
ENSMUST00000160439.8	chr1	+	1206	10	FSM	ENSMUSG00000026197.13	ENSMUST00000160439.8	1206	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGCTGTTTCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	75145289	75148273	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_75145352_75145474_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
ENSMUST00000160570.2	chr1	+	3704	9	FSM	ENSMUSG00000039210.17	ENSMUST00000160570.2	3704	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	186958376	187083624	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
ENSMUST00000160629.8	chr5	+	1713	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160629.8	1713	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	145104022	145118851	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115645_145115739_145117945
ENSMUST00000160653.2	chr13	-	2586	10	FSM	ENSMUSG00000038991.18	ENSMUST00000160653.2	2586	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGTCTGGTCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	38711890	38684248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38711650
ENSMUST00000160705.8	chr6	+	624	5	FSM	ENSMUSG00000089862.9	ENSMUST00000160705.8	624	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGAACCTGTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	8259427	8427279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_8259494_8270472_8270582_8373905_8373968_8401076_8401155_8426970
ENSMUST00000160718.9	chr19	-	1295	5	FSM	ENSMUSG00000040913.12	ENSMUST00000160718.9	1295	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTTTGGTGGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	45619577	45566692	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_45567365_45567559_45567702_45568091_45568233_45580167_45580234_45619303
ENSMUST00000160801.8	chr13	+	3062	14	FSM	ENSMUSG00000042015.18	ENSMUST00000160801.8	3062	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTGGGTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95112855	95159821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133694_95136019_95136023_95136374_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
ENSMUST00000160853.8	chr15	+	1651	8	FSM	ENSMUSG00000022553.17	ENSMUST00000160853.8	1651	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAACCTGGGAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	76235493	76238573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76235860_76236666_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ENSMUST00000160972.8	chr1	+	1358	5	FSM	ENSMUSG00000026150.15	ENSMUST00000160972.8	1358	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	82706949	82730111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_82707158_82708833_82709004_82713139_82713229_82728240_82728326_82729305
ENSMUST00000161074.8	chr10	-	875	5	FSM	ENSMUSG00000019791.13	ENSMUST00000161074.8	875	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTGTCTTCAGACACAC	NA	NA	NA	NA	NA	NA	NA	NA	30494475	30484136	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
ENSMUST00000161137.8	chr3	-	1927	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTGCTATAAGACAATT	NA	NA	NA	NA	NA	NA	NA	NA	75464163	75423796	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
ENSMUST00000161187.8	chr9	-	2847	14	FSM	ENSMUSG00000042790.17	ENSMUST00000161187.8	2847	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAATGCATCTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	45817705	45774988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811508_45811555_45816103_45816218_45817649
ENSMUST00000161335.8	chr6	+	2524	9	FSM	ENSMUSG00000030232.19	ENSMUST00000161335.8	2524	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCAAATTGTAACAATTC	NA	NA	NA	NA	NA	NA	NA	NA	140572607	140598552	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_140572784_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
ENSMUST00000161366.2	chr6	-	626	2	FSM	ENSMUSG00000089890.2	ENSMUST00000161366.2	626	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTCTTCCTTTACTACC	NA	NA	NA	NA	NA	NA	NA	NA	8364136	8354055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_8354405_8363859
ENSMUST00000161368.2	chr19	-	1160	2	FSM	ENSMUSG00000024939.7	ENSMUST00000161368.2	1160	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	5779681	5778114	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5778858_5779264
ENSMUST00000161391.2	chr15	+	757	4	ISM	ENSMUSG00000022553.17	ENST00000534585.5	1724	7	1549	347	1549	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGGATGTCCACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	76237093	76238226	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_76237213_76237337_76237661_76237785_76237921_76238046
ENSMUST00000161436.2	chr16	-	739	5	FSM	ENSMUSG00000022668.11	ENST00000383677.7	773	5	-27	61	-27	-61	multi-exon	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGACAACTGGAGTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	44566646	44559627	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44566361
ENSMUST00000161502.2	chr8	+	3527	6	FSM	ENSMUSG00000046152.17	ENSMUST00000161502.2	3527	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTCAGTGCTTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	31677374	31751766	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_31677491_31678329_31678435_31684981_31685318_31691237_31691533_31725622_31726459_31749927
ENSMUST00000161527.8	chr15	+	1743	9	FSM	ENSMUSG00000022553.17	ENSMUST00000161527.8	1743	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAACCTGGGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	76235493	76238572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_76235860_76236195_76236242_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ENSMUST00000161528.2	chr19	-	732	5	FSM	ENSMUSG00000024799.17	ENSMUST00000161528.2	732	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTATGGTTTTGCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	6117885	6116216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6116445_6116528_6116594_6116997_6117053_6117152_6117350_6117698
ENSMUST00000161542.8	chr18	-	2736	10	FSM	ENSMUSG00000038425.19	ENSMUST00000161542.8	2736	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTCACTGTAAGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	70663209	70641750	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70662821
ENSMUST00000161564.2	chr15	+	445	3	FSM	ENSMUSG00000023032.13	ENSMUST00000161564.2	445	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGTTTGGCTGTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	100659749	100672965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_100659856_100672510_100672593_100672708
ENSMUST00000161689.8	chr9	+	2836	19	FSM	ENSMUSG00000032280.17	ENSMUST00000161689.8	2836	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATCCTCATAAGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	61280953	61324258	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ENSMUST00000161758.3	chr9	+	5539	23	FSM	ENSMUSG00000040325.17	ENSMUST00000161758.3	5539	23	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTTTTCTTTTACC	NA	NA	NA	NA	NA	NA	NA	NA	106706267	106758191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742211_106742304_106742796_106742899_106751254_106751508_106757132
ENSMUST00000161807.8	chr14	-	962	11	FSM	ENSMUSG00000079197.11	ENSMUST00000161807.8	962	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTGTTGTTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	55828544	55824897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827553_55827951_55827985_55828298
ENSMUST00000161904.8	chr7	-	3090	3	FSM	ENSMUSG00000062040.15	ENSMUST00000161904.8	3090	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTTCTCTTCTGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	29599913	29593139	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_29595852_29598176_29598304_29599662
ENSMUST00000161913.8	chr13	+	1829	16	FSM	ENSMUSG00000021666.17	ENSMUST00000161913.8	1829	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACATCTCACATATACA	NA	NA	NA	NA	NA	NA	NA	NA	97274492	97304999	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773
ENSMUST00000161918.3	chr3	+	1385	5	NIC	ENSMUSG00000027942.18	novel	1500	6	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCATTTCTTTAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	89960177	89969752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_+_89960427_89960814_89960917_89965791_89965959_89966048_89966108_89968944
ENSMUST00000162057.8	chr16	+	1540	6	FSM	ENSMUSG00000022744.13	ENSMUST00000162057.8	1540	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAGTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	58548287	58553971	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_58548448_58549535_58549587_58549800_58550111_58551664_58551776_58552943_58553082_58553201
ENSMUST00000162060.9	chr3	-	1537	4	FSM	ENSMUSG00000027833.17	ENSMUST00000162060.9	1537	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAAGCGATACCACA	NA	NA	NA	NA	NA	NA	NA	NA	66885780	66880112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_66881241_66882776_66882866_66883185_66883244_66885518
ENSMUST00000162087.8	chr7	-	762	9	FSM	ENSMUSG00000009687.15	ENSMUST00000162087.8	762	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCCCACCCTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	30741565	30732231	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30737245_30737354_30738462_30738520_30739607_30739683_30740821_30740895_30741514
ENSMUST00000162099.8	chr6	-	2580	15	FSM	ENSMUSG00000003500.14	ENSMUST00000162099.8	2580	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGATCCTGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	29216341	29200436	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212170_29216070
ENSMUST00000162116.8	chr7	-	817	9	FSM	ENSMUSG00000009687.15	ENSMUST00000162116.8	817	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGGCCTCTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30741503	30732157	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30737245_30737354_30738462_30738520_30739607_30739683_30740821_30740895_30741471
ENSMUST00000162183.8	chr15	-	2130	10	FSM	ENSMUSG00000035845.18	ENSMUST00000162183.8	2130	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTCTTGTTGTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	88703521	88689446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_88690258_88690601_88690678_88690760_88690925_88695499_88695724_88696258_88696363_88698656_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88703460
ENSMUST00000162240.2	chr16	+	888	11	ISM	ENSMUSG00000038084.17	ENST00000361510.8	4310	31	7643	41937	997	-40970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGTACTGTTAGCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	29405831	29429724	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671
ENSMUST00000162244.8	chr5	+	1387	8	FSM	ENSMUSG00000029625.17	ENSMUST00000162244.8	1387	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGGGCGCCAGGCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	145104063	145118563	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115642_145115739_145117945
ENSMUST00000162301.8	chr18	+	3828	21	FSM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	828	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATTGTCAAGAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	3383231	3436377	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ENSMUST00000162327.8	chr5	+	2343	14	ISM	ENSMUSG00000042605.17	ENST00000673283.1	3462	23	71866	-78	71866	31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAATCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	121921969	121952783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ENSMUST00000162488.9	chr15	+	2197	12	ISM	ENSMUSG00000036661.15	ENST00000424248.2	3234	20	649	13232	649	-13232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTCTGTTGCTGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	73395982	73429561	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_+_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73414568_73414666_73416206_73416311_73416794_73416995_73418969_73419492_73426905_73427166_73428196_73428368_73429430
ENSMUST00000162531.8	chr8	+	3293	21	NIC	ENSMUSG00000025812.19	novel	4841	26	NA	NA	0	41462	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGACAGGTAGGTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	127791094	128201087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859
ENSMUST00000162579.8	chr15	-	544	3	FSM	ENSMUSG00000087331.9	ENSMUST00000162579.8	544	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCATGGTGTCTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	88958500	88955398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_88955540_88955773_88955952_88958275
ENSMUST00000162587.2	chr9	+	1148	7	ISM	ENSMUSG00000032086.13	ENST00000513780.5	1457	9	15599	-41	1	41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGAGCTATGGATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	45765924	45771660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr9_+_45766142_45767460_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ENSMUST00000162594.8	chr5	+	867	6	FSM	ENSMUSG00000038722.18	ENSMUST00000162594.8	867	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTCTTTTAAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	145077171	145084888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_145077253_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
ENSMUST00000162698.2	chr1	-	489	1	FSM	ENSMUSG00000089782.2	ENSMUST00000162698.2	489	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAAGCAACTTCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	97877114	97876625	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_97876600_97877100
ENSMUST00000162699.8	chr9	-	2808	14	NNC	ENSMUSG00000042790.17	novel	2287	14	NA	NA	8	128	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATCAGGTTCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	45818159	45775596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816067_45816218_45818035
ENSMUST00000162739.8	chr6	-	2471	14	FSM	ENSMUSG00000003500.14	ENSMUST00000162739.8	2471	14	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATCCTGTTTCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	29216330	29200432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29216070
ENSMUST00000162787.9	chr4	-	2408	23	FSM	ENSMUSG00000028559.18	ENSMUST00000162787.9	2408	23	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGTTACAATTTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	109059469	108919275	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ENSMUST00000162890.2	chr5	+	600	3	FSM	ENSMUSG00000089889.3	ENSMUST00000162890.2	600	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCGAAGGCCTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	143315081	143318456	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_143315109_143316458_143316641_143318065
ENSMUST00000163017.10	chr10	+	1650	3	FSM	ENSMUSG00000049641.16	ENSMUST00000163017.10	1650	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGTTTTTTCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	51898597	51904567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_51898900_51901152_51901460_51903526
ENSMUST00000163233.2	chrX	-	1256	3	FSM	ENSMUSG00000041353.13	ENSMUST00000163233.2	1256	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATATCTGACTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	149223901	149191579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_149192597_149203337_149203438_149223762
ENSMUST00000163313.3	chr15	+	2492	3	FSM	ENSMUSG00000022296.11	ENSMUST00000163313.3	2492	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATGGTTACAGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	38796538	38814659	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_38796717_38797304_38797472_38812512
ENSMUST00000163493.4	chr17	+	1802	2	FSM	ENSMUSG00000091475.5	ENSMUST00000163493.4	1802	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTCCCTTGAATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	25789331	25794017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25790076_25792959
ENSMUST00000163506.3	chr15	-	1771	14	FSM	ENSMUSG00000037570.17	ENSMUST00000163506.3	1771	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAGTAGCTTCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	99149826	99140706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99149742
ENSMUST00000163591.9	chr18	+	1057	6	FSM	ENSMUSG00000044024.17	ENSMUST00000163591.9	1057	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTCCCTGAGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	38088641	38091598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_38088970_38089981_38090048_38090141_38090209_38090641_38090828_38091066_38091443_38091564
ENSMUST00000163600.8	chr13	+	1055	9	FSM	ENSMUSG00000021548.11	ENSMUST00000163600.8	1055	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTGATTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	85337595	85361029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350559_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ENSMUST00000163610.9	chr7	+	1382	12	FSM	ENSMUSG00000025487.16	ENSMUST00000163610.9	1382	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCTCTAATAAATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	140462376	140478525	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477520_140477638_140478105
ENSMUST00000163694.4	chr9	+	2041	11	FSM	ENSMUSG00000032294.18	ENSMUST00000163694.4	2041	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGATGACGACTTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	59563855	59586472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582311_59582479_59585326_59585509_59586010
ENSMUST00000163710.8	chr7	-	885	13	FSM	ENSMUSG00000064179.14	ENSMUST00000163710.8	885	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTTCTTCAGGGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	4518958	4507661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513380_4515263_4515283_4516809_4516837_4517211_4517226_4517335_4517379_4518929
ENSMUST00000163717.2	chr17	+	1920	9	FSM	ENSMUSG00000034681.18	ENSMUST00000163717.2	1920	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	24633648	24644869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_24633709_24634014_24634137_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUST00000163812.9	chr7	+	3026	14	FSM	ENSMUSG00000038943.17	ENSMUST00000163812.9	3026	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	79944197	79966007	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79964861
ENSMUST00000163837.2	chr8	-	1272	13	FSM	ENSMUSG00000031708.18	ENSMUST00000163837.2	1272	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84321058	84298328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300337_84300552_84301106_84301158_84320968
ENSMUST00000163967.2	chr2	-	1210	5	FSM	ENSMUSG00000009214.10	ENSMUST00000163967.2	1210	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTCTGTCTGCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	26957880	26951649	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_26952350_26952713_26952831_26956302_26956452_26957364_26957480_26957751
ENSMUST00000164119.3	chr7	-	784	5	FSM	ENSMUSG00000040212.13	ENSMUST00000164119.3	784	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGACTCGGCTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	45570275	45567451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_45567660_45568741_45568883_45569358_45569462_45569712_45569829_45570059
ENSMUST00000164166.8	chr3	+	1804	12	FSM	ENSMUSG00000001416.14	ENSMUST00000164166.8	1804	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTGTCATGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	88204480	88229073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_88204574_88206648_88206711_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ENSMUST00000164181.2	chr10	-	665	6	FSM	ENSMUSG00000090841.3	ENSMUST00000164181.2	665	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTCTTTCTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	128329744	128326728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ENSMUST00000164199.8	chr10	-	1371	6	FSM	ENSMUSG00000025374.14	ENSMUST00000164199.8	1371	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCTGTGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	128245597	128237263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115
ENSMUST00000164202.9	chr19	+	4892	14	FSM	ENSMUSG00000043639.16	ENSMUST00000164202.9	4892	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCATCAGCTTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	53665736	53853811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_53666024_53801678_53802772_53803946_53804009_53805576_53805669_53806353_53806452_53821076_53821221_53823078_53823211_53829409_53829490_53831653_53832276_53838532_53838620_53839607_53840248_53841934_53842067_53847822_53847945_53852510
ENSMUST00000164242.9	chr17	+	2656	18	FSM	ENSMUSG00000040312.15	ENSMUST00000164242.9	2656	18	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCTGGAGATGTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	35827996	35841893	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35828127_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ENSMUST00000164259.9	chr10	-	2627	15	FSM	ENSMUSG00000040462.14	ENSMUST00000164259.9	2627	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCAGGCTCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	126957000	126931520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_126932242_126932498_126932612_126932783_126932949_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ENSMUST00000164302.8	chr1	+	2088	12	FSM	ENSMUSG00000038305.16	ENSMUST00000164302.8	2088	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTGCTCTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	57813913	57986124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_57813961_57838463_57838514_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
ENSMUST00000164330.2	chr3	-	1425	1	FSM	ENSMUSG00000091575.3	ENSMUST00000164330.2	1425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAGTGGGATTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	106390753	106389328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_106389300_106390800
ENSMUST00000164386.8	chr12	-	1043	6	FSM	ENSMUSG00000021139.18	ENSMUST00000164386.8	1043	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAATTGCTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	81579679	81405633	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
ENSMUST00000164404.8	chr17	-	1972	18	NIC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	4266	-40	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCACTCACAGCCCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	35973918	35967448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970151_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895
ENSMUST00000164428.3	chr10	+	858	2	FSM	ENSMUSG00000090439.4	ENSMUST00000164428.3	858	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTAGACCTTTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	60235504	60239338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_60235756_60238731
ENSMUST00000164472.8	chr6	+	1098	3	FSM	ENSMUSG00000059689.16	ENSMUST00000164472.8	1098	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGTATTTTTCATAATT	NA	NA	NA	NA	NA	NA	NA	NA	117818202	117822916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_117818230_117820213_117820354_117821985
ENSMUST00000164479.9	chr7	+	1375	8	FSM	ENSMUSG00000030688.16	ENSMUST00000164479.9	1375	8	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTTTGTGCCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	100966325	100995518	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_100966435_100970456_100970560_100970920_100971241_100991704_100991853_100992390_100992495_100993123_100993242_100994841_100994895_100995098
ENSMUST00000164541.2	chr13	+	1719	6	FSM	ENSMUSG00000042842.12	ENSMUST00000164541.2	1719	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAATGTCTTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	33149485	33163045	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_33149527_33155453_33155607_33156229_33156348_33158879_33159023_33161507_33161664_33161937
ENSMUST00000164543.2	chr19	-	341	2	ISM	ENSMUSG00000025204.11	ENSMUST00000026222.11	680	5	2560	15	2532	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGCTCTGGTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	44541319	44538693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_-_44538852_44541136
ENSMUST00000164551.2	chr2	-	1284	4	FSM	ENSMUSG00000034800.16	ENSMUST00000164551.2	1284	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCGGGCCTTCCTGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	127423428	127418854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395
ENSMUST00000164574.2	chr1	-	597	2	FSM	ENSMUSG00000090553.9	ENSMUST00000164574.2	597	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACATCTCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	133537953	133536598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_133536698_133537455
ENSMUST00000164589.9	chr7	-	1293	8	FSM	ENSMUSG00000030590.16	ENSMUST00000164589.9	1293	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	28855659	28851934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309_28855456_28855554
ENSMUST00000164609.8	chrX	-	1811	4	FSM	ENSMUSG00000031422.17	ENSMUST00000164609.8	1811	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	135643667	135633701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135643572
ENSMUST00000164688.2	chr15	+	1020	3	FSM	ENSMUSG00000023048.14	ENSMUST00000164688.2	1020	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTCTACTCACCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	102368517	102371211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102368582_102368804_102369155_102370605
ENSMUST00000164712.2	chr8	-	375	1	FSM	ENSMUSG00000090334.2	ENSMUST00000164712.2	375	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTTTTATAAAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	18707005	18706630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_18706600_18707000
ENSMUST00000164726.8	chr7	-	2620	3	FSM	ENSMUSG00000049580.13	ENSMUST00000164726.8	2620	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCATTTGCTGACAAATC	NA	NA	NA	NA	NA	NA	NA	NA	98010495	97999874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_98002338_98008564_98008675_98010448
ENSMUST00000164756.4	chr2	+	1691	1	FSM	ENSMUSG00000091337.4	ENSMUST00000164756.4	1691	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTTTGTCTAATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	125515014	125516705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_125515000_125516700
ENSMUST00000164766.8	chr14	+	1884	5	FSM	ENSMUSG00000022176.12	ENSMUST00000164766.8	1884	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTTTATCTTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	54713556	54717888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_54713832_54714927_54715273_54715484_54715559_54716410_54716619_54716906
ENSMUST00000164828.8	chr3	-	2051	5	FSM	ENSMUSG00000040374.14	ENSMUST00000164828.8	2051	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTAGAGGTCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	5641210	5625247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_5626825_5628224_5628333_5628679_5628790_5635546_5635690_5641097
ENSMUST00000164884.9	chr8	-	918	5	FSM	ENSMUSG00000031879.15	ENSMUST00000164884.9	918	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTAGCGTCTCTCATAG	NA	NA	NA	NA	NA	NA	NA	NA	105368597	105366469	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_105366719_105367151_105367198_105367599_105367726_105367942_105368023_105368180
ENSMUST00000164891.8	chr11	-	1454	3	FSM	ENSMUSG00000018648.16	ENSMUST00000164891.8	1454	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGCCCTTTATTAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	83959405	83938870	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_83940137_83941657_83941747_83959306
ENSMUST00000164916.9	chr16	+	1073	5	FSM	ENSMUSG00000075229.12	ENSMUST00000164916.9	1073	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGGTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	35892054	35912490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_35892508_35903060_35903187_35905386_35905534_35910270_35910331_35912203
ENSMUST00000164957.8	chr15	+	1055	4	FSM	ENSMUSG00000023048.14	ENSMUST00000164957.8	1055	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCACCTGTGCCATTACC	NA	NA	NA	NA	NA	NA	NA	NA	102367636	102371217	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102367691_102368542_102368582_102368804_102369155_102370605
ENSMUST00000165086.8	chr18	-	2778	9	FSM	ENSMUSG00000063889.17	ENSMUST00000165086.8	2778	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGTGTGTATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	3337589	3266355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_3268130_3273421_3273579_3276693_3276730_3295039_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3327493_3327592_3337379
ENSMUST00000165126.9	chr8	-	387	3	FSM	ENSMUSG00000090137.9	ENSMUST00000165126.9	387	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGGTCATACCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	70962273	70960981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_70961179_70961945_70962033_70962170
ENSMUST00000165164.9	chr6	+	918	9	FSM	ENSMUSG00000069678.11	ENSMUST00000165164.9	918	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATCTTCCTTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	83055326	83057836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ENSMUST00000165257.8	chr7	-	2514	2	FSM	ENSMUSG00000049580.13	ENSMUST00000165257.8	2514	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCATTTGCTGACAAATC	NA	NA	NA	NA	NA	NA	NA	NA	98010535	97999874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_98002338_98010484
ENSMUST00000165309.8	chr3	-	2038	6	FSM	ENSMUSG00000040374.14	ENSMUST00000165309.8	2038	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTAGAGGTCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	5641210	5625247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5630192_5630259_5641097
ENSMUST00000165363.10	chr16	+	3046	19	FSM	ENSMUSG00000005899.15	ENSMUST00000165363.10	3046	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAATACCAAC	NA	NA	NA	NA	NA	NA	NA	NA	17437223	17461211	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457707_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ENSMUST00000165392.8	chr6	-	1643	4	FSM	ENSMUSG00000032641.19	ENSMUST00000165392.8	1643	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTCCTGTGGATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	134874778	134846055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_134847407_134864592_134864749_134874124_134874177_134874694
ENSMUST00000165394.9	chr7	-	1228	7	FSM	ENSMUSG00000005575.17	ENSMUST00000165394.9	1228	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGAAGAATCGGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	12772202	12769046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547_12771633_12771996
ENSMUST00000165515.8	chr17	+	2078	12	NIC	ENSMUSG00000048440.17	novel	2242	13	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATGTCTTGGTTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	32755550	32770772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_+_32755630_32755968_32756171_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ENSMUST00000165537.8	chr15	+	2360	8	FSM	ENSMUSG00000009585.19	ENSMUST00000165537.8	2360	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGTCTCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79776608	79792630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUST00000165565.8	chr11	+	2311	11	FSM	ENSMUSG00000017421.19	ENSMUST00000165565.8	2311	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTGATACATGATTG	NA	NA	NA	NA	NA	NA	NA	NA	80274104	80287071	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ENSMUST00000165671.8	chr15	+	830	4	FSM	ENSMUSG00000001289.13	ENSMUST00000165671.8	830	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTAATAAATGTGACCGC	NA	NA	NA	NA	NA	NA	NA	NA	102234825	102239897	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102235285_102236956_102237032_102237146_102237253_102239707
ENSMUST00000165721.8	chr18	+	2323	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGTGAAATTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	61688383	61721375	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ENSMUST00000165738.8	chr15	-	3367	10	FSM	ENSMUSG00000063268.13	ENSMUST00000165738.8	3367	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAGAAGGACCGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	76127620	76117202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76117807_76117897_76118073_76124248_76124383_76124486_76125132_76125355_76125429_76125525_76125748_76125857_76126523_76126602_76126840_76126931_76127187_76127263
ENSMUST00000165740.9	chr8	-	1120	12	FSM	ENSMUSG00000031708.18	ENSMUST00000165740.9	1120	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84321113	84298328	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300499_84300552_84301106_84301158_84320968
ENSMUST00000165766.9	chr9	+	3063	21	FSM	ENSMUSG00000033335.18	ENSMUST00000165766.9	3063	21	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	21336203	21419050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21390194_21390334_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ENSMUST00000165839.3	chr9	+	2086	8	FSM	ENSMUSG00000032114.10	ENSMUST00000165839.3	2086	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCAGTGGCTCATCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	44309472	44314263	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
ENSMUST00000165842.3	chr3	+	1562	4	FSM	ENSMUSG00000028102.16	ENSMUST00000165842.3	1562	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTTTATTCAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	96543148	96552042	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_96543241_96543989_96544106_96544446_96544649_96550890
ENSMUST00000165873.8	chr3	-	2295	17	NIC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	19861	-6520	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGATCCCCTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	129834512	129784060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_-_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129827479_129827624_129834322
ENSMUST00000165953.3	chr17	+	1381	11	FSM	ENSMUSG00000024369.17	ENSMUST00000165953.3	1381	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTATTGTAACTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	35069383	35075348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35069439_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ENSMUST00000166104.9	chr13	+	1193	7	FSM	ENSMUSG00000015536.15	ENSMUST00000166104.9	1193	7	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATAGATCCTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	114954771	114965259	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ENSMUST00000166115.9	chr19	-	1858	7	FSM	ENSMUSG00000024958.14	ENSMUST00000166115.9	1858	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTGTTCCTTCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	6918561	6915424	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6915898_6916123_6916243_6916379_6916509_6916628_6916779_6916896_6917123_6917719_6917770_6917850
ENSMUST00000166120.9	chr12	-	990	6	FSM	ENSMUSG00000021079.17	ENSMUST00000166120.9	990	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTTGTCTTTACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	71183422	71169947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_71170461_71172235_71172332_71173106_71173172_71178774_71178861_71179280_71179417_71183328
ENSMUST00000166142.10	chr15	+	1632	7	FSM	ENSMUSG00000033287.17	ENSMUST00000166142.10	1632	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTCTCTGGGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	78312763	78323503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321783_78321872_78322686
ENSMUST00000166179.9	chr15	-	1058	4	FSM	ENSMUSG00000018893.16	ENSMUST00000166179.9	1058	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTCCGTCCGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	76934870	76899686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76900273_76901775_76901999_76906688_76906792_76934724
ENSMUST00000166268.8	chr7	-	665	11	NIC	ENSMUSG00000064179.14	novel	1059	14	NA	NA	-2	-2813	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAATTTGACCTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	4518960	4510566	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_-_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513380_4515263_4515286_4516809_4516837_4517211_4517226_4517335_4517379_4518929
ENSMUST00000166280.8	chr17	+	1341	6	FSM	ENSMUSG00000047428.15	ENSMUST00000166280.8	1341	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGAAATAGTATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	46608408	46614123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_46608447_46609493_46609625_46609873_46609938_46611876_46612008_46612569_46612715_46613291
ENSMUST00000166335.2	chr9	-	1053	2	FSM	ENSMUSG00000013822.8	ENSMUST00000166335.2	1053	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCGCTGTACTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	22025465	22024284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_22024976_22025103
ENSMUST00000166358.8	chr8	+	2963	17	NNC	ENSMUSG00000036564.18	novel	3101	17	NA	NA	160	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACGTGTGTCGTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	96404872	96441580	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr8_+_96405012_96423821_96423917_96426740_96426786_96432789_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96438952_96438992_96439805
ENSMUST00000166382.5	chr5	-	3238	3	ISM	ENSMUSG00000061898.11	ENSMUST00000049861.11	3335	5	3996	1	3996	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGTTTATGTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	143162489	143157941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_143160814_143161790_143161887_143162219
ENSMUST00000166409.6	chr5	+	1562	6	FSM	ENSMUSG00000029178.15	ENSMUST00000166409.6	1562	6	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGACCAATTTGTCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	64969681	64986825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_64969847_64974078_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ENSMUST00000166411.8	chr2	+	2088	12	FSM	ENSMUSG00000068882.14	ENSMUST00000166411.8	2088	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTCACTTTGGACATA	NA	NA	NA	NA	NA	NA	NA	NA	69691905	69702190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_69692084_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ENSMUST00000166427.8	chr15	+	2577	11	FSM	ENSMUSG00000058586.13	ENSMUST00000166427.8	2577	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCAAGTGGCTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	82984494	83000875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82987210_82988509_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
ENSMUST00000166445.8	chr6	-	1923	15	FSM	ENSMUSG00000029676.16	ENSMUST00000166445.8	1923	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCCATTGAGTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	25798016	25744579	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007
ENSMUST00000166478.8	chrX	-	1720	3	FSM	ENSMUSG00000031422.17	ENSMUST00000166478.8	1720	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	135644435	135633701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_135635251_135636294_135636372_135644341
ENSMUST00000166518.8	chrX	+	800	6	FSM	ENSMUSG00000002014.13	ENSMUST00000166518.8	800	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACACGGGGCTCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	72830633	72834430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_72830913_72832440_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ENSMUST00000166558.8	chr19	+	848	7	ISM	ENSMUSG00000024909.16	ENSMUST00000165485.8	1557	11	19	3487	13	-3356	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCCCCCCTCTGCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	5524734	5528394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr19_+_5524803_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228
ENSMUST00000166583.4	chr12	-	948	1	FSM	ENSMUSG00000071414.6	ENSMUST00000166583.4	948	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1787	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGTGGCGAGCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	13505971	13505023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_13505000_13506000
ENSMUST00000166617.8	chr17	+	1528	6	FSM	ENSMUSG00000047428.15	ENSMUST00000166617.8	1528	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCTTCTGTGGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	46608853	46614197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_46609005_46609493_46609625_46609873_46609938_46611876_46612008_46612569_46612715_46613291
ENSMUST00000166627.8	chr17	+	1211	7	FSM	ENSMUSG00000073423.11	ENSMUST00000166627.8	1211	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTACCTATGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	33848063	33850690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_33848191_33848595_33848673_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ENSMUST00000166687.6	chr3	-	1922	9	FSM	ENSMUSG00000041263.15	ENSMUST00000166687.6	1922	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATATGTGTCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	88997352	88991287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88997277
ENSMUST00000166693.3	chr17	-	271	4	FSM	ENSMUSG00000067288.14	ENSMUST00000166693.3	271	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTGTCTAGAAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	34043450	34042025	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34042068_34042166_34042305_34043272_34043321_34043407
ENSMUST00000166750.9	chr8	+	2408	21	FSM	ENSMUSG00000034390.17	ENSMUST00000166750.9	2408	21	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	117983802	118186169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_117984141_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
ENSMUST00000166814.8	chr1	+	2760	8	FSM	ENSMUSG00000035131.15	ENSMUST00000166814.8	2760	8	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTGTGGGATTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	146373424	146778210	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_146373479_146390405_146390692_146558313_146558505_146577393_146577585_146622217_146622324_146627492_146627730_146707298_146707522_146776738
ENSMUST00000166940.3	chr12	+	2199	11	FSM	ENSMUSG00000021044.16	ENSMUST00000166940.3	2199	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGACTGTTCCTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	88327658	88428488	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_88327743_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUST00000166950.8	chr11	-	754	4	FSM	ENSMUSG00000078974.11	ENSMUST00000166950.8	754	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTATCAAATTTTAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	16458484	16451637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458103
ENSMUST00000166980.9	chr17	-	3627	18	FSM	ENSMUSG00000003534.18	ENSMUST00000166980.9	3627	18	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGGTGTATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	36012936	35992461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36012895
ENSMUST00000167111.6	chr3	-	1418	8	FSM	ENSMUSG00000038975.15	ENSMUST00000167111.6	1418	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	153617782	153612925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561
ENSMUST00000167160.8	chr4	-	1572	6	FSM	ENSMUSG00000029001.16	ENSMUST00000167160.8	1572	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCCTGCGGCTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	148244052	148237256	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_148238102_148240602_148240739_148240851_148240948_148241036_148241164_148242993_148243281_148243971
ENSMUST00000167180.8	chr17	+	1324	6	FSM	ENSMUSG00000040771.15	ENSMUST00000167180.8	1324	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGGTTTGCACACATGA	NA	NA	NA	NA	NA	NA	NA	NA	48717041	48724282	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_48717401_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
ENSMUST00000167182.8	chr6	+	2271	4	FSM	ENSMUSG00000042079.14	ENSMUST00000167182.8	2271	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	5877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	NA	NA	NA	NA	NA	NA	NA	NA	117877300	117902582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_117877468_117894430_117894560_117896059_117896121_117900668
ENSMUST00000167187.8	chr18	+	1222	11	FSM	ENSMUSG00000024576.15	ENSMUST00000167187.8	1222	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGTGGACAACCATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	61688759	61720602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ENSMUST00000167197.8	chr7	-	1944	10	FSM	ENSMUSG00000060601.14	ENSMUST00000167197.8	1944	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAACAAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	44203347	44199075	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202182_44203002_44203133_44203228
ENSMUST00000167203.2	chr13	-	628	7	NNC	ENSMUSG00000049658.14	novel	1704	10	NA	NA	5262	-916	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAACAAAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	100235084	100215241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_100215306_100220648_100220704_100225860_100225956_100228701_100228836_100229921_100230051_100234045_100234106_100234993
ENSMUST00000167226.2	chr10	-	390	2	FSM	ENSMUSG00000090761.2	ENSMUST00000167226.2	390	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTAACAGGAGGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	128231432	128227710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128227943_128231274
ENSMUST00000167264.8	chr8	+	1566	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTAATGCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34222069	34267192	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ENSMUST00000167354.8	chr3	+	1986	15	FSM	ENSMUSG00000027680.16	ENSMUST00000167354.8	1986	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAAATGTTATTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34074246	34123486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_34074313_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ENSMUST00000167361.8	chr7	+	860	8	FSM	ENSMUSG00000078765.12	ENSMUST00000167361.8	860	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTCTGTGGTTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	30262774	30264786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_30262834_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ENSMUST00000167371.8	chr19	+	1382	10	FSM	ENSMUSG00000024909.16	ENSMUST00000167371.8	1382	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCTGAGGTGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	5524767	5531881	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5524803_5525088_5525207_5525435_5525485_5526093_5526301_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ENSMUST00000167387.8	chr3	+	599	7	FSM	ENSMUSG00000004032.11	ENSMUST00000167387.8	599	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGAGCTCGCTGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	107803269	107805865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_107803315_107803941_107804007_107804603_107804686_107804777_107804879_107805282_107805379_107805481_107805593_107805766
ENSMUST00000167405.3	chr7	-	2597	2	FSM	ENSMUSG00000049580.13	ENSMUST00000167405.3	2597	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCATTTGCTGACAAATC	NA	NA	NA	NA	NA	NA	NA	NA	98010499	97999874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_98002338_98010365
ENSMUST00000167436.3	chr11	+	606	4	FSM	ENSMUSG00000060938.15	ENSMUST00000167436.3	606	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGTCTTGTGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	68792460	68795359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_68792584_68793095_68793269_68794004_68794146_68795190
ENSMUST00000167504.3	chr9	-	944	4	FSM	ENSMUSG00000091537.3	ENSMUST00000167504.3	944	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGGGGTTGCCATGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	108911655	108906954	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_108907494_108911069_108911158_108911238_108911295_108911394
ENSMUST00000167569.8	chr9	-	726	3	FSM	ENSMUSG00000004771.13	ENSMUST00000167569.8	726	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTAGAAATAAGCTATTG	NA	NA	NA	NA	NA	NA	NA	NA	64645024	64623784	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_64624271_64632783_64632865_64644865
ENSMUST00000167624.2	chr17	-	895	7	FSM	ENSMUSG00000024026.14	ENSMUST00000167624.2	895	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGTCTGGGCAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	30831633	30811839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_30812049_30813088_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ENSMUST00000167643.4	chr15	-	1145	3	FSM	ENSMUSG00000091780.4	ENSMUST00000167643.4	1145	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCATGTGCTCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	89258021	89255839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_89256669_89257625_89257806_89257885
ENSMUST00000167661.7	chr2	-	1151	9	NNC	ENSMUSG00000015790.17	novel	1173	9	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTCAGTCTGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	26806480	26803394	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805782_26805966_26806019_26806268
ENSMUST00000167692.8	chr17	-	2092	14	FSM	ENSMUSG00000023942.16	ENSMUST00000167692.8	2092	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	45904566	45896127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45904481
ENSMUST00000167721.8	chr5	-	1242	5	FSM	ENSMUSG00000029580.15	ENSMUST00000167721.8	1242	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTGTCTTTTTTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	142892457	142889255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_142889697_142889821_142890004_142890098_142890538_142891318_142891448_142892406
ENSMUST00000167866.2	chr9	+	2403	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGGCGTTTGCATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	54493794	54511945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUST00000167885.8	chr9	+	540	4	FSM	ENSMUSG00000007656.14	ENSMUST00000167885.8	540	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCCTCTACTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	74945100	74964104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_74945244_74950494_74950581_74959514_74959638_74963916
ENSMUST00000167926.8	chr4	+	1505	9	FSM	ENSMUSG00000028937.15	ENSMUST00000167926.8	1505	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTAGGTGGTCATTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	152270590	152356312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_152270843_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ENSMUST00000167965.8	chr7	+	1746	11	FSM	ENSMUSG00000030782.18	ENSMUST00000167965.8	1746	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTACAGTGCCAGAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	127846149	127852879	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_127846181_127847348_127847465_127847591_127847645_127847749_127847893_127848058_127848147_127848261_127848368_127848471_127848667_127851248_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUST00000167998.2	chr3	+	1938	12	FSM	ENSMUSG00000028048.12	ENSMUST00000167998.2	1938	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGTGCTATCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	89110246	89115988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_89110394_89110498_89110668_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ENSMUST00000168015.8	chr3	-	3460	21	FSM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	104725621	104702151	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725473_104725573
ENSMUST00000168166.8	chr9	+	3944	4	FSM	ENSMUSG00000007656.14	ENSMUST00000168166.8	3944	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTATTGATTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	74944895	74967576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
ENSMUST00000168345.6	chr3	+	1295	7	FSM	ENSMUSG00000091512.6	ENSMUST00000168345.6	1295	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTGTATAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	137624286	137634526	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_137624425_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
ENSMUST00000168352.2	chr3	-	2151	3	FSM	ENSMUSG00000028184.13	ENSMUST00000168352.2	2151	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACGTGCACTTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	148528615	148521491	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_148523565_148526608_148526662_148528590
ENSMUST00000168361.8	chr12	+	6226	21	FSM	ENSMUSG00000020594.15	ENSMUST00000168361.8	6226	21	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTGCCTGATTACATCA	NA	NA	NA	NA	NA	NA	NA	NA	8724680	8802581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_8724827_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794750_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ENSMUST00000168382.2	chr18	+	1750	4	FSM	ENSMUSG00000057561.11	ENSMUST00000168382.2	1750	4	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAACTTTTTCTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	46730774	46742238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_46730868_46731707_46731768_46740570_46741344_46741414
ENSMUST00000168463.8	chr12	-	431	4	FSM	ENSMUSG00000091803.8	ENSMUST00000168463.8	431	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTATGCTTTTCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	81531887	81518866	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_81518946_81521360_81521424_81527704_81527777_81531670
ENSMUST00000168520.3	chr10	-	1043	6	FSM	ENSMUSG00000025436.13	ENSMUST00000168520.3	1043	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTATTTTTTGGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	126737217	126723117	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_126723564_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
ENSMUST00000168578.3	chr7	-	1375	2	FSM	ENSMUSG00000030431.9	ENSMUST00000168578.3	1375	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCACCTCCAGTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	4792655	4787555	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_4788279_4792003
ENSMUST00000168593.9	chr17	+	735	6	FSM	ENSMUSG00000023826.17	ENSMUST00000168593.9	735	6	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTTCCACCTTATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	11286011	11712060	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_11286180_11456348_11456590_11522479_11522599_11653436_11653521_11711565_11711682_11712053
ENSMUST00000168665.3	chr9	-	595	2	FSM	ENSMUSG00000032403.9	ENSMUST00000168665.3	595	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTCTAGAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	63306523	63301728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_63301958_63306157
ENSMUST00000168776.8	chr1	+	3267	13	FSM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	93406782	93437455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_93406903_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUST00000168846.3	chr15	-	1652	12	FSM	ENSMUSG00000067713.8	ENSMUST00000168846.3	1652	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	98729402	98710677	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
ENSMUST00000168864.4	chr9	-	2076	2	FSM	ENSMUSG00000037206.16	ENSMUST00000168864.4	2076	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACAGCATTTCTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	58065828	58063556	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_58065514_58065709
ENSMUST00000169068.8	chr9	-	1364	6	FSM	ENSMUSG00000040813.17	ENSMUST00000169068.8	1364	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTGGTTTTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	106562881	106535944	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562833
ENSMUST00000169082.3	chr15	+	1797	4	FSM	ENSMUSG00000044217.18	ENSMUST00000169082.3	1797	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATCTCCCTCCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	99488662	99492710	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_99489516_99490542_99490708_99491126_99491211_99492015
ENSMUST00000169094.8	chr5	-	2716	12	FSM	ENSMUSG00000029405.17	ENSMUST00000169094.8	2716	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTTCTTCAGTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	92231372	92201575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ENSMUST00000169169.8	chr14	+	721	6	FSM	ENSMUSG00000091898.9	ENSMUST00000169169.8	721	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTCCTGGGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	30930268	30933686	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_30930336_30931759_30931791_30932016_30932164_30932520_30932636_30933236_30933374_30933462
ENSMUST00000169186.3	chr16	+	1320	2	FSM	ENSMUSG00000035790.16	ENSMUST00000169186.3	1320	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGATAAGTCTTACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	31922695	31926873	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_31922866_31925723
ENSMUST00000169286.2	chr3	-	874	1	FSM	ENSMUSG00000027848.13	ENSMUST00000169286.2	874	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	103639869	103638995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_103639000_103639900
ENSMUST00000169308.8	chr17	+	1026	5	FSM	ENSMUSG00000025731.17	ENSMUST00000169308.8	1026	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGGGAATACCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	26094474	26096143	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634
ENSMUST00000169357.2	chr7	-	1691	1	FSM	ENSMUSG00000092118.2	ENSMUST00000169357.2	1691	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTCTTTGTACAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	51512015	51510324	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_51510300_51512000
ENSMUST00000169371.9	chr4	+	5365	26	FSM	ENSMUSG00000038070.16	ENSMUST00000169371.9	5365	26	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGTGATGCTCATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	84802701	85050154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_84803062_84806879_84806969_84865794_84865880_84874512_84874648_84875236_84875417_84889367_84889502_84892099_84892263_84897560_84897759_84912865_84913019_84914691_84914818_84923159_84923282_84924641_84924762_84952024_84952126_84964539_84964632_84967840_84968374_84981417_84981593_84985716_84985811_84985893_84986118_85010873_85011066_85014986_85015085_85016585_85016713_85018494_85018633_85018950_85019137_85033501_85033688_85036678_85036757_85048878
ENSMUST00000169390.8	chr5	+	1833	6	FSM	ENSMUSG00000029326.14	ENSMUST00000169390.8	1833	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTTCATACAGACGT	NA	NA	NA	NA	NA	NA	NA	NA	100187843	100216619	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ENSMUST00000169418.8	chrX	-	1782	3	FSM	ENSMUSG00000031422.17	ENSMUST00000169418.8	1782	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	135642101	135633701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_135635251_135640553_135640644_135641958
ENSMUST00000169492.8	chr9	+	3963	4	FSM	ENSMUSG00000007656.14	ENSMUST00000169492.8	3963	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTTTTGTCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	74944895	74967595	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
ENSMUST00000169591.8	chr17	+	2242	13	FSM	ENSMUSG00000048440.17	ENSMUST00000169591.8	2242	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATGTCTTGGTTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	32755531	32770772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_32755630_32755968_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ENSMUST00000169604.8	chr15	-	1249	7	FSM	ENSMUSG00000033029.13	ENSMUST00000169604.8	1249	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACATGTGCCACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	79025453	79018860	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_79019423_79019552_79019654_79019836_79019966_79020506_79020690_79023437_79023501_79025080_79025193_79025354
ENSMUST00000169609.2	chr9	-	1677	6	FSM	ENSMUSG00000032018.15	ENSMUST00000169609.2	1677	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGCTCTTCCATAATTC	NA	NA	NA	NA	NA	NA	NA	NA	42175496	42166028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175417
ENSMUST00000169613.4	chr19	-	821	7	FSM	ENSMUSG00000060803.7	ENSMUST00000169613.4	821	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTCTTTGGTGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	4087985	4085406	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087862
ENSMUST00000169659.8	chr1	-	2849	15	FSM	ENSMUSG00000026409.15	ENSMUST00000169659.8	2849	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTGGAATAATTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	130643515	130624407	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
ENSMUST00000169695.2	chr11	+	3741	14	FSM	ENSMUSG00000078676.10	ENSMUST00000169695.2	3741	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTGGCCAGTTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	98700633	98724632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ENSMUST00000169772.3	chr1	+	2311	12	FSM	ENSMUSG00000038305.16	ENSMUST00000169772.3	2311	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTGCTCTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	57884729	57986124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_57884843_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
ENSMUST00000169807.8	chr11	-	2347	10	FSM	ENSMUSG00000018537.17	ENSMUST00000169807.8	2347	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGTGGTTCTTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	97590474	97579648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
ENSMUST00000169861.9	chr19	+	3664	9	FSM	ENSMUSG00000024976.15	ENSMUST00000169861.9	3664	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGATTTTTGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	53932736	54021298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_53932834_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ENSMUST00000170017.8	chr11	-	1195	9	NNC	ENSMUSG00000017286.16	novel	1434	9	NA	NA	12	-97	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTTTAATCCCAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	76134477	76112432	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130331_76131698_76131749_76134380
ENSMUST00000170122.4	chr3	-	345	4	FSM	ENSMUSG00000090733.7	ENSMUST00000170122.4	345	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTTTGTCTTGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	90120958	90119977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120916
ENSMUST00000170141.3	chr8	+	1466	6	FSM	ENSMUSG00000031697.13	ENSMUST00000170141.3	1466	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTTGTGATTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	86026317	86034907	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_86026622_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ENSMUST00000170142.8	chr6	-	2133	10	FSM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAGTTGGCTGTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	50238749	50184382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_50185187_50193329_50193404_50196216_50196419_50197968_50198097_50199715_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255_50228494_50238713
ENSMUST00000170190.8	chr2	-	2483	7	FSM	ENSMUSG00000038671.16	ENSMUST00000170190.8	2483	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAACTATAAGGCTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	181007197	180999482	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181007011
ENSMUST00000170202.9	chr11	-	1078	8	FSM	ENSMUSG00000020444.20	ENSMUST00000170202.9	1078	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGTCACAGCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	59082778	59074700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
ENSMUST00000170217.8	chr1	-	2036	18	FSM	ENSMUSG00000026245.17	ENSMUST00000170217.8	2036	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATGGCTCTGCTACTAT	NA	NA	NA	NA	NA	NA	NA	NA	78465496	78394611	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_78394860_78401829_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ENSMUST00000170241.8	chr4	+	1079	5	FSM	ENSMUSG00000028478.19	ENSMUST00000170241.8	1079	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGAAGCATCTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	44012642	44032845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
ENSMUST00000170263.9	chr8	+	2096	6	FSM	ENSMUSG00000031562.16	ENSMUST00000170263.9	2096	6	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	NA	NA	NA	NA	NA	NA	NA	48562992	48594700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ENSMUST00000170308.8	chr9	+	429	4	FSM	ENSMUSG00000007656.14	ENSMUST00000170308.8	429	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATTTCTCTGACTACG	NA	NA	NA	NA	NA	NA	NA	NA	74944958	74964120	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_74945006_74945188_74945244_74959514_74959638_74963916
ENSMUST00000170335.4	chr18	-	965	1	FSM	ENSMUSG00000091957.4	ENSMUST00000170335.4	965	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40287	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGACCTGCAGAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	61393043	61392078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_61392100_61393000
ENSMUST00000170376.8	chr10	-	1381	12	FSM	ENSMUSG00000019809.17	ENSMUST00000170376.8	1381	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTTATGTCCTTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	13428886	13399585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_13399688_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
ENSMUST00000170468.8	chr5	-	1510	6	FSM	ENSMUSG00000029507.17	ENSMUST00000170468.8	1510	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGCCTATTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	110928481	110921533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928427
ENSMUST00000170588.8	chr11	-	3386	22	FSM	ENSMUSG00000020439.18	ENSMUST00000170588.8	3386	22	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTCTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	3489292	3467522	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487554_3487606_3489111
ENSMUST00000170716.8	chr11	+	1461	11	FSM	ENSMUSG00000060600.16	ENSMUST00000170716.8	1461	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCATGCTGTGTTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	70548621	70553336	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ENSMUST00000170801.8	chr19	-	3172	11	FSM	ENSMUSG00000025198.17	ENSMUST00000170801.8	3172	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGTGTTCTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	44057965	44023382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710
ENSMUST00000170828.2	chrX	+	452	5	NNC	ENSMUSG00000079435.10	novel	483	5	NA	NA	36	6	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	8871	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTCCTGTTGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	133486438	133488811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chrX_+_133486469_133486826_133486933_133487260_133487328_133488199_133488323_133488685
ENSMUST00000170862.8	chr18	+	2259	11	FSM	ENSMUSG00000024576.15	ENSMUST00000170862.8	2259	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGTTGCTTAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	61688409	61721253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ENSMUST00000170882.8	chr7	+	1050	5	FSM	ENSMUSG00000042675.16	ENSMUST00000170882.8	1050	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCCCTGGCTCACATGG	NA	NA	NA	NA	NA	NA	NA	NA	126376146	126379683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126376376_126376942_126377126_126377225_126377270_126377477_126377587_126379198
ENSMUST00000170908.8	chr2	+	1342	5	FSM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCGCCCTTACCTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	125994060	126007196	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689_126001949_126006646
ENSMUST00000170918.8	chr3	-	2655	18	NIC	ENSMUSG00000028024.15	novel	4181	20	NA	NA	409	-1087	intron_retention	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGACAGTGAAAACACGTGC	NA	NA	NA	NA	NA	NA	NA	NA	129125913	129063925	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_-_129064072_129064993_129065073_129070290_129070432_129074071_129074243_129074333_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129092478_129092631_129092746_129092813_129097363_129097430_129099055_129099191_129102670_129102785_129103417_129103573_129106209_129106331_129113028_129113161_129115008_129115151_129125510
ENSMUST00000170947.3	chr9	-	973	6	FSM	ENSMUSG00000032057.10	ENSMUST00000170947.3	973	6	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATGACCCCTGATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	51013378	50992414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_50992831_50994878_50994932_50997413_50997474_51011299_51011371_51012353_51012393_51013044
ENSMUST00000171041.8	chr11	-	1466	7	FSM	ENSMUSG00000018442.14	ENSMUST00000171041.8	1466	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTATTTAAGCTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	70910667	70900758	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70910216
ENSMUST00000171140.8	chr15	-	1416	10	ISM	ENSMUSG00000116461.2	ENSMUST00000052315.13	4296	27	257	9962	257	-9962	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	89313642	89310569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
ENSMUST00000171172.3	chr17	-	1272	3	FSM	ENSMUSG00000034509.10	ENSMUST00000171172.3	1272	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGATTTAGACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	46464479	46458312	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_46459211_46463704_46463968_46464368
ENSMUST00000171183.2	chr7	-	883	2	FSM	ENSMUSG00000045948.9	ENSMUST00000171183.2	883	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	28441195	28439065	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28439665_28440911
ENSMUST00000171210.3	chr12	+	1858	11	FSM	ENSMUSG00000059060.16	ENSMUST00000171210.3	1858	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCAAAGCTGGGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	79344055	79861464	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_79344107_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994_79374179_79704597_79704695_79813844_79813949_79849963_79850043_79860715
ENSMUST00000171229.8	chr13	-	1426	10	FSM	ENSMUSG00000021417.16	ENSMUST00000171229.8	1426	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	35178127	35161730	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177996
ENSMUST00000171460.8	chr15	+	1719	9	FSM	ENSMUSG00000036106.16	ENSMUST00000171460.8	1719	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTCTGCCCCCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	84553820	84587874	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_84553907_84565400_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
ENSMUST00000171788.8	chr8	-	3552	8	FSM	ENSMUSG00000014837.16	ENSMUST00000171788.8	3552	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTGGCTTCTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	106016160	106007041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015400_106015798_106016035
ENSMUST00000171845.8	chr2	+	938	9	FSM	ENSMUSG00000051154.12	ENSMUST00000171845.8	938	9	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	2633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTTTGGAGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	18677194	18681041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_18677219_18677253_18677415_18678705_18678818_18678935_18679000_18679091_18679127_18679466_18679528_18679619_18679677_18679760_18679821_18680677
ENSMUST00000171847.8	chr17	-	2033	13	FSM	ENSMUSG00000023942.16	ENSMUST00000171847.8	2033	13	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	4147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	45910529	45896125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45910398
ENSMUST00000171953.8	chrX	+	1801	4	FSM	ENSMUSG00000025666.17	ENSMUST00000171953.8	1801	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTGAAATTTAATGATTC	NA	NA	NA	NA	NA	NA	NA	NA	80114310	80139337	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_80114767_80127896_80128038_80138057_80138262_80138337
ENSMUST00000172088.8	chr6	+	2812	4	FSM	ENSMUSG00000042097.18	ENSMUST00000172088.8	2812	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTCCAATGTGTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	117840037	117849726	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_117840104_117843355_117843536_117846178_117846235_117847216
ENSMUST00000172165.8	chr1	+	3192	12	FSM	ENSMUSG00000116048.2	ENSMUST00000172165.8	3192	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	93406714	93437455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_93406791_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUST00000172202.2	chr4	+	1527	2	FSM	ENSMUSG00000091021.2	ENSMUST00000172202.2	1527	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAGTCTCCCAGGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	132079082	132080693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_132080032_132080115
ENSMUST00000172229.8	chr17	-	1446	3	FSM	ENSMUSG00000047407.18	ENSMUST00000172229.8	1446	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAGCATTTTCTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	71156785	71151199	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_71152268_71153166_71153394_71156634
ENSMUST00000172482.8	chr9	+	2613	21	FSM	ENSMUSG00000033335.18	ENSMUST00000172482.8	2613	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGGGGGCAATGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	21336391	21417698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21390194_21390334_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ENSMUST00000172501.8	chr17	-	579	5	FSM	ENSMUSG00000092203.8	ENSMUST00000172501.8	579	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTAAATAGACTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	35171444	35169218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_35169452_35169673_35169824_35170860_35170902_35171111_35171150_35171327
ENSMUST00000172503.3	chr17	+	1744	7	FSM	ENSMUSG00000073411.13	ENSMUST00000172503.3	1744	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTGAAAGTGACCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	35482071	35486329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485442_35485491_35485663
ENSMUST00000172518.8	chr17	-	710	5	FSM	ENSMUSG00000036315.14	ENSMUST00000172518.8	710	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGATGTTATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	37269425	37265249	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040_37269189_37269269
ENSMUST00000172572.9	chr3	-	1054	7	FSM	ENSMUSG00000092607.10	ENSMUST00000172572.9	1054	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCGCTGCCCTTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	95041322	95036846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_95037195_95037474_95037670_95040135_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ENSMUST00000172585.9	chr6	-	1086	11	NIC	ENSMUSG00000029830.16	novel	2366	16	NA	NA	3	-773	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	955	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCTGCAATACTAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	38008024	37961446	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_37961459_37963432_37963547_37988173_37988264_37989225_37989308_37991691_37991804_37993954_37994167_37996612_37996687_37998483_37998613_37999928_38000055_38003884_38003949_38007953
ENSMUST00000172618.8	chr17	-	1559	8	FSM	ENSMUSG00000015120.16	ENSMUST00000172618.8	1559	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCTAGCAGCTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	25492888	25481152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511_25491740_25492294
ENSMUST00000172820.2	chr10	-	574	2	FSM	ENSMUSG00000001666.9	ENSMUST00000172820.2	574	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTTCTTTGCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	75608868	75607063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_75607341_75608571
ENSMUST00000172912.8	chr17	-	1570	8	FSM	ENSMUSG00000061232.17	ENSMUST00000172912.8	1570	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTATGCTGTGTGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	34219263	34214990	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34215451_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
ENSMUST00000172974.8	chr6	+	3063	6	FSM	ENSMUSG00000029767.17	ENSMUST00000172974.8	3063	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTATGTGTCTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	29348067	29376671	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29374397
ENSMUST00000172993.2	chr17	+	444	4	NNC	ENSMUSG00000024392.18	novel	3536	24	NA	NA	9775	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	35364863	35366295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_35364898_35365001_35365146_35365242_35365330_35366116
ENSMUST00000172996.2	chr9	+	3800	27	NIC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	2962	-17129	combination_of_known_junctions	FALSE	non_canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGATGAAGAAGATCGT	NA	NA	NA	NA	NA	NA	NA	NA	21547062	21597524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589248_21589348_21589611_21589690_21590224_21590444_21597308
ENSMUST00000173004.2	chr17	+	870	6	FSM	ENSMUSG00000007050.18	ENSMUST00000173004.2	870	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTGGTTTGTCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	35201134	35204865	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35201344_35201595_35201664_35203955_35203985_35204084_35204116_35204224_35204285_35204392
ENSMUST00000173084.8	chr17	-	1286	8	FSM	ENSMUSG00000015120.16	ENSMUST00000173084.8	1286	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTTTGTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	25492357	25480894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511_25491740_25492294
ENSMUST00000173158.8	chr13	-	1415	8	NNC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATGTTTCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	67081131	67060189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076352_67077948_67078288_67080998
ENSMUST00000173192.2	chr6	+	387	1	FSM	ENSMUSG00000101878.2	ENSMUST00000173192.2	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1819	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGCCTGGATTCCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	116150697	116151084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_116150700_116151100
ENSMUST00000173393.8	chr2	+	2071	5	FSM	ENSMUSG00000027510.18	ENSMUST00000173393.8	2071	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGAGGTTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	172862290	172876527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_172862355_172863464_172864064_172864584_172864709_172865119_172865175_172875298
ENSMUST00000173397.8	chr9	+	3510	21	FSM	ENSMUSG00000033335.18	ENSMUST00000173397.8	3510	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTGTGTGGGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21336227	21418434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
ENSMUST00000173477.8	chr3	-	892	8	NNC	ENSMUSG00000064068.16	novel	1522	8	NA	NA	67	-121	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGATGGCGTTCCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	89121147	89116519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117981_89119989_89120070_89120183_89120254_89121119
ENSMUST00000173492.9	chr17	-	2357	11	FSM	ENSMUSG00000079553.12	ENSMUST00000173492.9	2357	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTTTTGCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34109635	34094632	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ENSMUST00000173499.2	chr19	-	485	2	FSM	ENSMUSG00000092341.4	ENSMUST00000173499.2	485	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGACATACAGGAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	5852699	5851943	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5851995_5852265
ENSMUST00000173666.8	chr3	+	361	4	NNC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	18	-424	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATACGTGGAGATGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	137570351	137571844	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_137570448_137570893_137570972_137571280_137571395_137571771
ENSMUST00000173705.8	chr7	+	2294	16	NIC	ENSMUSG00000053046.17	novel	2149	20	NA	NA	3349	-73	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGTGGGGCTGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	141538625	141556908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_141538703_141539170_141539205_141539446_141539516_141539622_141539770_141541487_141541653_141541850_141541949_141542022_141542174_141545976_141546038_141546848_141547057_141547451_141547501_141550625_141550750_141552114_141552296_141552369_141552460_141552656_141552752_141554578_141554627_141556211
ENSMUST00000173713.8	chr17	-	890	7	FSM	ENSMUSG00000015120.16	ENSMUST00000173713.8	890	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGCAGCTAGTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	25493284	25481148	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493135
ENSMUST00000173844.8	chr17	-	382	4	FSM	ENSMUSG00000067288.14	ENSMUST00000173844.8	382	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTCTAGAAATTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	34043536	34042023	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34042091_34042166_34042305_34043272_34043321_34043407
ENSMUST00000173855.8	chr1	+	1695	5	NIC	ENSMUSG00000015222.19	novel	6259	15	NA	NA	0	-25606	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAAGAACACACGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	66419670	66452560	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr1_+_66419933_66438547_66438662_66440602_66440681_66449732_66449979_66451565
ENSMUST00000173969.2	chr12	-	1152	2	FSM	ENSMUSG00000091931.6	ENSMUST00000173969.2	1152	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTTCTGTAGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	102724059	102719533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_102720426_102723799
ENSMUST00000173980.2	chr8	-	621	4	FSM	ENSMUSG00000078143.4	ENSMUST00000173980.2	621	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTAGCCCCGAACCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	110595064	110586615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_110586664_110587455_110587662_110587731_110587962_110594927
ENSMUST00000173983.8	chr1	-	2635	10	FSM	ENSMUSG00000025977.16	ENST00000321801.11	2440	10	11	-206	11	206	multi-exon	FALSE	canonical	NA	NA	NA	NA	4721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTTATGGGTGGAATCA	NA	NA	NA	NA	NA	NA	NA	NA	55399900	55308014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_55309825_55339245_55339345_55343656_55343786_55344834_55344883_55362808_55362881_55379631_55379760_55385535_55385612_55388039_55388095_55394806_55394899_55399774
ENSMUST00000173987.2	chr17	-	924	5	NNC	ENSMUSG00000077450.14	novel	6109	5	NA	NA	10	-664	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCCTTCACCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	33979254	33966387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_33966788_33967483_33967560_33967840_33968035_33968755_33968952_33979196
ENSMUST00000174004.2	chr17	+	1466	2	FSM	ENSMUSG00000050088.10	ENSMUST00000174004.2	1466	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATGTTTAAGGTCATCG	NA	NA	NA	NA	NA	NA	NA	NA	15163530	15165248	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_15163582_15163833
ENSMUST00000174050.8	chr9	+	2715	20	NIC	ENSMUSG00000033335.18	novel	3063	21	NA	NA	148	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	21336539	21419050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21390194_21390334_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ENSMUST00000174172.8	chr7	+	3008	15	FSM	ENSMUSG00000038943.17	ENSMUST00000174172.8	3008	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACACTGTTTTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	79944252	79966002	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
ENSMUST00000174230.2	chr13	-	1053	7	FSM	ENSMUSG00000021418.16	ENSMUST00000174230.2	1053	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGAGTCACACCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	36090327	36080697	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36088401_36088547_36090186
ENSMUST00000174250.4	chr17	-	1052	6	FSM	ENSMUSG00000067203.9	ENSMUST00000174250.4	1052	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGCTGCCTGGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	34197764	34194049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34194083_34194453_34194588_34194714_34194990_34196744_34197021_34197227_34197498_34197700
ENSMUST00000174299.9	chr17	+	2577	10	FSM	ENSMUSG00000039656.18	ENSMUST00000174299.9	2577	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTCTGGACTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	34250825	34257373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ENSMUST00000174510.8	chr10	+	2031	6	FSM	ENSMUSG00000009293.18	ENSMUST00000174510.8	2031	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2545	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTTGTGTGGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	77458108	77481827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_77458251_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480280
ENSMUST00000174514.2	chr19	+	669	3	FSM	ENSMUSG00000024856.11	ENSMUST00000174514.2	669	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTACTTCCCCATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	4147400	4148465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4147508_4147816_4147918_4148004
ENSMUST00000174609.9	chr17	-	527	5	FSM	ENSMUSG00000008668.16	ENSMUST00000174609.9	527	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34174637	34170972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34171093_34171194_34171268_34171376_34171566_34174051_34174151_34174591
ENSMUST00000174647.2	chr17	+	1736	9	FSM	ENSMUSG00000064120.15	ENST00000373195.7	1740	9	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCCACACTCTCCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	49735469	49761818	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_49735593_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49761057
ENSMUST00000174664.2	chr4	+	1294	3	FSM	ENSMUSG00000092345.2	ENSMUST00000174664.2	1294	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCATGACAGCAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	59003209	59041888	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_59003558_59039226_59039359_59041074
ENSMUST00000174672.2	chr17	+	2597	3	FSM	ENSMUSG00000036036.16	ENSMUST00000174672.2	2597	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37314557	37321524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_37315796_37316941_37317087_37320310
ENSMUST00000174714.8	chr17	-	520	4	FSM	ENSMUSG00000092203.8	ENSMUST00000174714.8	520	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATAGACTTTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	35171424	35169216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_35169452_35169673_35169824_35171111_35171150_35171327
ENSMUST00000174745.8	chr17	-	536	4	ISM	ENSMUSG00000008668.16	ENSMUST00000008812.9	560	5	465	0	451	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34174186	34170972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051
ENSMUST00000174769.2	chr6	-	1029	3	FSM	ENSMUSG00000033735.10	ENSMUST00000174769.2	1029	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGCAATAGAGTGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	85114738	85110668	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_85111271_85113804_85113914_85114420
ENSMUST00000174779.8	chr17	-	632	5	FSM	ENSMUSG00000024387.14	ENSMUST00000174779.8	632	5	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTCTCCTACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35338751	35335173	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729
ENSMUST00000174824.2	chr17	-	464	3	NIC	ENSMUSG00000024446.14	novel	729	5	NA	NA	1	-277	intron_retention	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCAGTGGTAAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	36568747	36566835	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_-_36566962_36568333_36568599_36568674
ENSMUST00000175779.8	chr3	+	3065	22	FSM	ENSMUSG00000028059.17	ENSMUST00000175779.8	3065	22	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACTGAAGAACATTAGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	88523823	88554202	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUST00000175795.4	chr8	-	2748	4	FSM	ENSMUSG00000031734.14	ENSMUST00000175795.4	2748	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGCAGGTCTGCCACATGG	NA	NA	NA	NA	NA	NA	NA	NA	92528695	92525152	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_92525605_92526038_92526106_92526300_92527427_92527592
ENSMUST00000175860.2	chr3	+	492	1	FSM	ENSMUSG00000093392.2	ENSMUST00000175860.2	492	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2968	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTCTTTTGACTTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	122050376	122050868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_122050400_122050900
ENSMUST00000175883.8	chr9	+	2505	15	FSM	ENSMUSG00000032547.13	ENSMUST00000175883.8	2505	15	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCCCCCGCATGGAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	102712115	102784741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763192_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ENSMUST00000175887.8	chr14	+	809	7	FSM	ENSMUSG00000021996.17	ENSMUST00000175887.8	809	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTCGCAGAAGATCATG	NA	NA	NA	NA	NA	NA	NA	NA	74973406	74987224	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982989_74983158_74987084
ENSMUST00000176047.8	chr4	+	2330	9	FSM	ENSMUSG00000028710.19	ENSMUST00000176047.8	2330	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCCACACCCCCACACAC	NA	NA	NA	NA	NA	NA	NA	NA	115642010	115669511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
ENSMUST00000176322.8	chr12	+	2649	25	FSM	ENSMUSG00000021000.18	ENSMUST00000176322.8	2649	25	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATGGGTAAATTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	59178252	59236738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193121_59193149_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ENSMUST00000176325.8	chr15	+	2765	8	FSM	ENSMUSG00000009585.19	ENSMUST00000176325.8	2765	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	79776649	79792637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051
ENSMUST00000176381.8	chr19	+	2251	11	FSM	ENSMUSG00000010110.18	ENSMUST00000176381.8	2251	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGGAAGCAGGTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	8718776	8733433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_8718940_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ENSMUST00000176419.2	chr8	-	719	3	FSM	ENSMUSG00000014846.13	ENSMUST00000176419.2	719	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGACTGCTGTGTCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	106195294	106194314	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_106194657_106194787_106194942_106195071
ENSMUST00000176506.8	chr7	+	1839	13	FSM	ENSMUSG00000041420.19	ENSMUST00000176506.8	1839	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATTCTCATTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	15909199	15920429	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_15909493_15911316_15911499_15911633_15911794_15911885_15911937_15912669_15912721_15912926_15913026_15915965_15916078_15916244_15916394_15917715_15917793_15917962_15918022_15918559_15918644_15919372_15919447_15919981
ENSMUST00000176531.8	chr9	-	2310	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176531.8	2310	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35111224	35098080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111152
ENSMUST00000176670.8	chr10	-	2227	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	117212834	117184946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ENSMUST00000176906.2	chr10	-	509	3	FSM	ENSMUSG00000093674.8	ENSMUST00000176906.2	509	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAACTGCTGTTACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	128384971	128383988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128384321_128384526_128384550_128384817
ENSMUST00000176939.8	chr19	-	3427	19	FSM	ENSMUSG00000025007.14	ENSMUST00000176939.8	3427	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	40576813	40538700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562660_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ENSMUST00000177026.3	chr15	-	371	3	FSM	ENSMUSG00000033697.17	ENSMUST00000177026.3	371	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTTCAGCCCATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	76702196	76642244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76642444_76649684_76649852_76702191
ENSMUST00000177137.8	chr14	+	853	8	FSM	ENSMUSG00000021996.17	ENSMUST00000177137.8	853	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCCTCAGCCAAGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	74973406	74987165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983162_74987084
ENSMUST00000177163.8	chr10	-	544	3	FSM	ENSMUSG00000093674.8	ENSMUST00000177163.8	544	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128385022	128383982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128384299_128384526_128384550_128384817
ENSMUST00000177181.8	chr14	+	835	8	FSM	ENSMUSG00000021996.17	ENSMUST00000177181.8	835	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCCTCAGCCAAGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	74973406	74987165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987098
ENSMUST00000177213.8	chrX	-	1032	4	FSM	ENSMUSG00000025040.14	ENSMUST00000177213.8	1032	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTATGGCTGATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	17437880	17423762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541
ENSMUST00000177229.8	chr6	-	1848	15	FSM	ENSMUSG00000030067.18	ENSMUST00000177229.8	1848	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGGGCGGGCCGACCC	NA	NA	NA	NA	NA	NA	NA	NA	99005220	98907050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_98907196_98912234_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987019_98992384_98992475_98993488_98993627_99005124
ENSMUST00000177283.8	chr14	+	794	8	NNC	ENSMUSG00000021996.17	novel	835	8	NA	NA	-312	-4034	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTTGTGTTTAGACTA	NA	NA	NA	NA	NA	NA	NA	NA	74973094	74983131	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_74973140_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989
ENSMUST00000177323.8	chr16	-	915	3	FSM	ENSMUSG00000005983.16	ENSMUST00000177323.8	915	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTTGTTTGTTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	3725566	3723661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_3724165_3724704_3725059_3725508
ENSMUST00000177363.2	chr3	-	3215	1	FSM	ENSMUSG00000093656.2	ENSMUST00000177363.2	3215	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCCCGTCTGAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	96177605	96174390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_96174400_96177600
ENSMUST00000177447.2	chr13	+	745	5	NNC	ENSMUSG00000058258.15	novel	3027	5	NA	NA	493	-1851	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGTTGACCATGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	8936029	8940636	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938152_8940353
ENSMUST00000177467.8	chr2	-	744	7	FSM	ENSMUSG00000039826.14	ENSMUST00000177467.8	744	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGCGGAACTGCAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	29677634	29667768	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_29667969_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ENSMUST00000177667.2	chr19	+	1243	5	FSM	ENSMUSG00000025226.12	ENSMUST00000177667.2	1243	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTGGTGCATAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	46316625	46318884	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_46316741_46316841_46316966_46317113_46317268_46317526_46318033_46318540
ENSMUST00000177671.8	chrY	+	708	5	FSM	ENSMUSG00000096768.9	ENSMUST00000177671.8	708	5	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	90796769	90827733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrY_+_90797028_90797032_90797234_90797237_90797249_90804564_90804687_90827617
ENSMUST00000177752.9	chr19	-	664	6	FSM	ENSMUSG00000056629.17	ENSMUST00000177752.9	664	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGAGTGAGTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	6957869	6955111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956510_6957761
ENSMUST00000177778.9	chr12	+	2542	4	FSM	ENSMUSG00000073197.10	ENSMUST00000177778.9	2542	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTTGTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	18564510	18585255	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_18564937_18581610_18581738_18581935_18581997_18583327
ENSMUST00000177840.9	chr7	+	1708	8	FSM	ENSMUSG00000025510.15	ENSMUST00000177840.9	1708	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATAAGCACTCGAATC	NA	NA	NA	NA	NA	NA	NA	NA	141047334	141051376	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_141047380_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ENSMUST00000177955.8	chr8	+	1307	10	FSM	ENSMUSG00000031505.12	ENSMUST00000177955.8	1307	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	11547505	11563287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
ENSMUST00000178098.8	chr3	-	4434	7	FSM	ENSMUSG00000027708.15	ENSMUST00000178098.8	4434	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTTTATTGCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	35986483	35946253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986341
ENSMUST00000178135.3	chr10	-	75	1	FSM	ENSMUSG00000094955.3	ENSMUST00000178135.3	75	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTGCCGGTGCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	43332497	43332422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_43332400_43332500
ENSMUST00000178147.3	chrX	-	651	1	FSM	ENSMUSG00000095597.3	ENSMUST00000178147.3	651	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	564	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	151693151	151692500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_151692500_151693200
ENSMUST00000178163.8	chr7	-	934	14	FSM	ENSMUSG00000064179.14	ENSMUST00000178163.8	934	14	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTTCTTCAGGGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	4518974	4507661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513388_4513434_4513446_4516579_4516613_4516809_4516837_4517211_4517226_4517335_4517379_4518929
ENSMUST00000178235.8	chr1	-	1756	11	FSM	ENSMUSG00000006299.14	ENSMUST00000178235.8	1756	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGTCTGTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	74323839	74319004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323204_74323661
ENSMUST00000178324.2	chr8	-	1989	15	FSM	ENSMUSG00000031478.17	ENSMUST00000178324.2	1989	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCGTGTGTGCTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	22652510	22618301	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622216_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339
ENSMUST00000178328.8	chr3	-	1698	7	FSM	ENSMUSG00000019528.19	ENSMUST00000178328.8	1698	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTGGTTGTTTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	20209260	20176250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_20177029_20179421_20179642_20192180_20192308_20204702_20204866_20205116_20205292_20206893_20207030_20209161
ENSMUST00000178348.2	chr9	+	672	4	FSM	ENSMUSG00000096385.8	ENSMUST00000178348.2	672	4	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTCCATGTCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	3004456	3005194	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_3004523_3004526_3005010_3005069_3005073_3005074
ENSMUST00000178421.8	chr13	-	1414	10	FSM	ENSMUSG00000021417.16	ENSMUST00000178421.8	1414	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	35178127	35161732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177204_35177996
ENSMUST00000178557.2	chr1	+	483	1	FSM	ENSMUSG00000094497.2	ENSMUST00000178557.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	602	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGACTCCTGCCAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	43228315	43228798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_43228300_43228800
ENSMUST00000178615.8	chr19	-	1018	3	FSM	ENSMUSG00000094936.9	ENSMUST00000178615.8	1018	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATGTGTGCTTTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	4843879	4835180	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4835596_4842425_4842849_4843699
ENSMUST00000178632.8	chrX	+	933	3	FSM	ENSMUSG00000046432.13	ENSMUST00000178632.8	933	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGAAATTCAACAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	135171001	135172727	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_135171151_135171558_135171632_135172016
ENSMUST00000178641.2	chr9	+	672	4	FSM	ENSMUSG00000096736.2	ENSMUST00000178641.2	672	4	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3034598	3035805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_3034665_3034668_3035152_3035680_3035684_3035685
ENSMUST00000178700.8	chr1	+	1827	6	FSM	ENSMUSG00000040836.16	ENSMUST00000178700.8	1827	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGGAAGGAAACATCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	165123357	165149366	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_165123458_165133746_165134162_165137837_165138563_165144808_165144914_165146317_165146438_165149004
ENSMUST00000178774.3	chr17	-	498	5	FSM	ENSMUSG00000052146.17	ENSMUST00000178774.3	498	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGAGTTTATGTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	27853449	27849438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299
ENSMUST00000178797.8	chr16	+	4177	8	FSM	ENSMUSG00000022885.17	ENSMUST00000178797.8	4177	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTTCTCTTTATACTT	NA	NA	NA	NA	NA	NA	NA	NA	23044770	23179100	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_23044930_23075708_23075852_23136313_23136449_23139782_23140429_23147091_23147190_23173615_23173715_23174958_23175134_23176378
ENSMUST00000178812.9	chr9	+	2702	15	FSM	ENSMUSG00000006932.18	ENSMUST00000178812.9	2702	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGTAGTGTCTGAACG	NA	NA	NA	NA	NA	NA	NA	NA	120762637	120788846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_120762683_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ENSMUST00000178851.2	chr7	+	2797	5	FSM	ENSMUSG00000030649.19	ENSMUST00000178851.2	2797	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGACAGCTATCCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	101547001	101550846	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUST00000178854.8	chr1	+	1076	15	FSM	ENSMUSG00000026414.14	ENSMUST00000178854.8	1076	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATGGAATAGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	135768612	135779998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_135768651_135769638_135769650_135769752_135769765_135773292_135773383_135773635_135773672_135774459_135774494_135775446_135775511_135775718_135775836_135776548_135776627_135777087_135777199_135778116_135778126_135778448_135778559_135779089_135779181_135779433_135779475_135779764
ENSMUST00000178855.8	chr11	-	779	4	FSM	ENSMUSG00000078974.11	ENSMUST00000178855.8	779	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTATCAAATTTTAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	16458484	16451637	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458078
ENSMUST00000179054.8	chr10	-	2081	2	FSM	ENSMUSG00000097327.8	ENSMUST00000179054.8	2081	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAAAAATGCTTACCA	NA	NA	NA	NA	NA	NA	NA	NA	22025169	21988948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_21990248_22024387
ENSMUST00000179074.9	chr17	+	1938	14	FSM	ENSMUSG00000024069.15	ENSMUST00000179074.9	1938	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAGGTATATTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	74702615	74731004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714200_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ENSMUST00000179114.8	chr11	+	1264	5	FSM	ENSMUSG00000020817.17	ENSMUST00000179114.8	1264	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGCCCTCCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	70735617	70784947	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394
ENSMUST00000179165.9	chr15	+	4325	7	FSM	ENSMUSG00000022297.16	ENSMUST00000179165.9	4325	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTGTATTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	38869428	38901583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_38869828_38870619_38870959_38889060_38889258_38894209_38895228_38897244_38897394_38898202_38898623_38899780
ENSMUST00000179172.8	chr10	+	744	6	FSM	ENSMUSG00000035242.16	ENSMUST00000179172.8	744	6	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	4636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGCCCTGCCCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	80662526	80664839	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80662740_80664070_80664129_80664129_80664217_80664294_80664468_80664552_80664631_80664704
ENSMUST00000179233.2	chr8	-	1423	9	FSM	ENSMUSG00000008892.13	ENSMUST00000179233.2	1423	9	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	3736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTAGTAGTGGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	23083829	23067090	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077565_23077619_23078741_23078811_23083699
ENSMUST00000179290.8	chr4	-	1721	2	FSM	ENSMUSG00000045268.14	ENSMUST00000179290.8	1721	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGTGTACTTATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	119031053	119026712	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_119028240_119030859
ENSMUST00000179323.2	chr4	+	808	2	FSM	ENSMUSG00000050188.9	ENSMUST00000179323.2	808	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTCTGTGCCTGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	125990445	125992374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_125990501_125991621
ENSMUST00000179353.8	chr1	+	3219	13	FSM	ENSMUSG00000116048.2	ENSMUST00000179353.8	3219	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	93406714	93437455	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_93406791_93416849_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUST00000179421.9	chr8	-	773	4	FSM	ENSMUSG00000031736.12	ENSMUST00000179421.9	773	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTGTTTGTGTAATGG	NA	NA	NA	NA	NA	NA	NA	NA	93082459	93052660	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_93053091_93073597_93073733_93077318_93077383_93082315
ENSMUST00000179478.8	chr6	+	956	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	-313	-1237	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGACAGGCCTGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	117893941	117901343	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_+_117894033_117894430_117894560_117896059_117896121_117900668
ENSMUST00000179488.3	chr14	-	754	3	FSM	ENSMUSG00000096001.3	ENSMUST00000179488.3	754	3	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGGAGCATCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	36832058	36824098	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_36824649_36829330_36829412_36831935
ENSMUST00000179765.8	chr11	-	2485	11	FSM	ENSMUSG00000018537.17	ENSMUST00000179765.8	2485	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGTGGTTCTTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	97590210	97579648	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97588814_97588887_97590031
ENSMUST00000179781.8	chr10	+	1261	7	FSM	ENSMUSG00000023175.16	ENSMUST00000179781.8	1261	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79540324	79547803	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ENSMUST00000179784.9	chr4	+	6232	24	FSM	ENSMUSG00000078517.13	ENSMUST00000179784.9	6232	24	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACTATTTGTGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	139079897	139106041	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139091641_139091651_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ENSMUST00000179855.2	chr11	-	436	4	NNC	ENSMUSG00000017561.17	novel	2230	7	NA	NA	77	-12819	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACATAGTGAAAGACCACA	NA	NA	NA	NA	NA	NA	NA	NA	79971687	79950137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr11_-_79950204_79950923_79951012_79955017_79955226_79971613
ENSMUST00000179863.8	chr1	+	1097	15	FSM	ENSMUSG00000026414.14	ENSMUST00000179863.8	1097	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATGGAATAGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	135768612	135779998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_135768651_135769638_135769650_135769752_135769765_135771522_135771553_135773292_135773383_135773635_135773672_135774459_135774494_135775446_135775511_135775718_135775836_135776548_135776627_135777087_135777199_135778448_135778559_135779089_135779181_135779433_135779475_135779764
ENSMUST00000179873.8	chr6	+	1576	4	FSM	ENSMUSG00000039958.18	ENSMUST00000179873.8	1576	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATAAGGAACTCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	149043010	149052664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_149043203_149045512_149045941_149048655_149048787_149051839
ENSMUST00000179881.2	chr9	+	672	5	FSM	ENSMUSG00000096385.8	ENSMUST00000179881.2	672	5	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCTTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3005158	3006948	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_3005225_3005228_3005362_3006180_3006537_3006540_3006552_3006842
ENSMUST00000179998.8	chr17	-	2456	7	FSM	ENSMUSG00000025730.15	ENSMUST00000179998.8	2456	7	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGGCTTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	26138616	26101087	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338_26138524_26138563
ENSMUST00000180015.9	chr12	+	1819	13	FSM	ENSMUSG00000011148.15	ENSMUST00000180015.9	1819	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	902	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTTGACTTCGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	112586526	112607794	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_112586745_112594734_112594838_112598687_112598751_112599128_112599180_112599433_112599570_112600577_112600686_112600813_112600896_112601034_112601162_112601864_112602020_112602827_112602953_112604618_112604717_112606045_112606196_112607391
ENSMUST00000180020.8	chr6	+	2280	3	FSM	ENSMUSG00000042079.14	ENSMUST00000180020.8	2280	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	NA	NA	NA	NA	NA	NA	NA	NA	117894254	117902582	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_117894560_117896059_117896121_117900668
ENSMUST00000180021.2	chr9	+	702	5	FSM	ENSMUSG00000039217.14	ENSMUST00000180021.2	702	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCATGTGTCCAGCCCAATT	NA	NA	NA	NA	NA	NA	NA	NA	50486572	50493137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_50486649_50487993_50488006_50489060_50489193_50490586_50490721_50492789
ENSMUST00000180025.8	chrX	+	2812	5	FSM	ENSMUSG00000072964.15	ENSMUST00000180025.8	2812	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTGTTTGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	134786599	134791827	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_134786837_134787593_134787676_134788009_134788067_134789120_134789229_134789499
ENSMUST00000180036.8	chr10	+	1044	6	FSM	ENSMUSG00000035242.16	ENSMUST00000180036.8	1044	6	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	17572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	80662519	80665124	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80662740_80664070_80664129_80664129_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUST00000180043.8	chr17	+	1447	7	FSM	ENSMUSG00000040482.17	ENSMUST00000180043.8	1447	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGCTGTGTCTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	35055994	35058162	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_35056193_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
ENSMUST00000180072.8	chr11	-	486	5	FSM	ENSMUSG00000034566.11	ENSMUST00000180072.8	486	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCCTGGGACGGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	115309333	115306573	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211
ENSMUST00000180088.2	chr11	+	1921	9	FSM	ENSMUSG00000034412.14	ENSMUST00000180088.2	1921	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGCTGTGTATAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	4136821	4165502	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
ENSMUST00000180140.8	chr17	+	693	4	FSM	ENSMUSG00000023904.11	ENSMUST00000180140.8	693	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCAGCAGCCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	23892569	23894201	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_23892678_23892942_23893043_23893508_23893650_23893857
ENSMUST00000180154.8	chr9	+	1900	8	FSM	ENSMUSG00000032372.15	ENSMUST00000180154.8	1900	8	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTTAGAAAATAACATTAA	NA	NA	NA	NA	NA	NA	NA	NA	92157654	92179805	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_92158072_92164164_92164246_92169624_92169858_92171715_92171759_92172691_92172913_92173029_92173192_92177567_92177730_92179224
ENSMUST00000180269.2	chr8	+	749	7	NIC	ENSMUSG00000031505.12	novel	1359	10	NA	NA	49	-3051	intron_retention	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGGACAGCAACGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	11547632	11560236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559558_11560226
ENSMUST00000180341.2	chr6	+	1922	1	FSM	ENSMUSG00000042079.14	ENSMUST00000180341.2	1922	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4266	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	117900661	117902583	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_117900700_117902600
ENSMUST00000180396.2	chr13	+	1073	3	FSM	ENSMUSG00000097346.2	ENSMUST00000180396.2	1073	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3026	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTGTGTTCAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	97887619	97897473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_97887661_97887919_97888078_97896599
ENSMUST00000180432.9	chr15	+	1563	9	FSM	ENSMUSG00000097039.9	ENSMUST00000180432.9	1563	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTATTGAAGTCATGATT	NA	NA	NA	NA	NA	NA	NA	NA	61909895	62121373	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_61910051_61978996_61979315_62021087_62021202_62031845_62031978_62047315_62047398_62114022_62114151_62114282_62114411_62116567_62116707_62121006
ENSMUST00000180544.3	chr19	-	2568	4	FSM	ENSMUSG00000074733.15	ENSMUST00000180544.3	2568	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGTGTGTCTTTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	61129200	61106568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_61108891_61115444_61115506_61115875_61116003_61129142
ENSMUST00000180576.3	chr12	-	604	5	FSM	ENSMUSG00000097788.3	ENSMUST00000180576.3	604	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCACACTCCTGGAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	108521877	108503602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_108503783_108505512_108505566_108505656_108505730_108506839_108506898_108521637
ENSMUST00000180638.3	chr1	+	1135	3	FSM	ENSMUSG00000097503.3	ENSMUST00000180638.3	1135	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGTTCCATTCCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	169796977	169799965	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_169797145_169798018_169798372_169799350
ENSMUST00000180728.2	chr13	+	633	2	FSM	ENSMUSG00000097373.2	ENSMUST00000180728.2	633	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTTGGTTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	41513446	41524384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_41513607_41523911
ENSMUST00000180765.2	chr19	-	1073	6	FSM	ENSMUSG00000037349.10	ENSMUST00000180765.2	1073	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTTAGCTTCTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	6973485	6970385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6972138_6972609_6973104_6973382
ENSMUST00000180933.3	chr7	-	2310	3	FSM	ENSMUSG00000097343.3	ENSMUST00000180933.3	2310	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGTTGGCCCAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	120276743	120272658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_120274500_120275630_120275880_120276523
ENSMUST00000181034.3	chr15	-	881	2	FSM	ENSMUSG00000097093.3	ENSMUST00000181034.3	881	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGTGGTATTTACATT	NA	NA	NA	NA	NA	NA	NA	NA	100512991	100512017	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_100512572_100512664
ENSMUST00000181039.8	chr10	-	1108	7	FSM	ENSMUSG00000020216.14	ENSMUST00000181039.8	1108	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCATCTACTCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80649326	80644331	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_80644874_80644979_80645063_80646009_80646199_80646297_80646401_80647900_80647939_80648128_80648252_80649296
ENSMUST00000181055.2	chr12	+	2098	3	FSM	ENSMUSG00000097381.3	ENSMUST00000181055.2	2098	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACTGATTCTACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	111251217	111260422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111251739_111258547_111258639_111258936
ENSMUST00000181091.8	chr10	-	1876	11	FSM	ENSMUSG00000036112.16	ENSMUST00000181091.8	1876	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGATACATTTTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	93725637	93696790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715436_93715934_93716001_93722855_93722964_93725399
ENSMUST00000181217.8	chr10	-	1984	11	FSM	ENSMUSG00000036112.16	ENSMUST00000181217.8	1984	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGATACATTTTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	93725646	93696790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715535_93715934_93716001_93722855_93722964_93725399
ENSMUST00000181259.8	chr17	-	1256	5	FSM	ENSMUSG00000073437.11	ENSMUST00000181259.8	1256	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACTGGGAGGGAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	24633487	24628454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24629146_24629231_24629328_24630898_24631058_24631440_24631549_24633285
ENSMUST00000181337.2	chr8	+	1105	2	FSM	ENSMUSG00000097308.2	ENSMUST00000181337.2	1105	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATCTCTTTTGATTATT	NA	NA	NA	NA	NA	NA	NA	NA	4728461	4738494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_4728567_4737494
ENSMUST00000181462.2	chr9	-	2505	2	FSM	ENSMUSG00000097445.2	ENSMUST00000181462.2	2505	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57444912	57438569	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_57440869_57444706
ENSMUST00000181484.2	chr17	+	1174	3	FSM	ENSMUSG00000096965.8	ENSMUST00000181484.2	1174	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTCTCCAGACCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	5849765	5853515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_5850269_5851473_5851617_5852987
ENSMUST00000181586.8	chr8	+	765	5	FSM	ENSMUSG00000031818.13	ENSMUST00000181586.8	765	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	121394960	121400946	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_121395115_121396047_121396122_121399463_121399632_121399959_121400092_121400709
ENSMUST00000181800.2	chr13	+	777	5	FSM	ENSMUSG00000085457.4	ENSMUST00000181800.2	777	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTCTTATGCTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	34120014	34144164	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_34120081_34137299_34137525_34138689_34138809_34142583_34142642_34143855
ENSMUST00000181873.8	chr5	-	626	5	FSM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTAGAATGTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	100577394	100568700	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955_100577098_100577184
ENSMUST00000181921.2	chr19	-	1642	3	FSM	ENSMUSG00000097785.3	ENSMUST00000181921.2	1642	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTGCTTCTGTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	57349207	57311816	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_57312495_57313027_57313230_57348445
ENSMUST00000182042.2	chr14	-	1420	8	FSM	ENSMUSG00000058690.15	ENSMUST00000182042.2	1420	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAAGTCCTTGCAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	36641492	36601315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_36601720_36612298_36612384_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36641181
ENSMUST00000182209.8	chr17	+	1977	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	47904394	47910614	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUST00000182229.8	chr7	+	732	4	FSM	ENSMUSG00000046056.16	ENSMUST00000182229.8	732	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGCTCACTGTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30450895	30455559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_30451341_30454233_30454306_30454426_30454472_30455389
ENSMUST00000182232.9	chr9	-	826	6	FSM	ENSMUSG00000097195.11	ENSMUST00000182232.9	826	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTCAATTCTTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	88405027	88403102	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404640_88404903
ENSMUST00000182328.8	chr7	-	1391	7	FSM	ENSMUSG00000030591.18	ENSMUST00000182328.8	1391	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGTGTATCCAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	28879977	28873612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
ENSMUST00000182402.8	chr17	+	1275	10	FSM	ENSMUSG00000098090.9	ENSMUST00000182402.8	1275	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTGGGTGTCCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	95057527	95082557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_95057661_95062638_95062734_95063861_95063952_95068925_95069033_95069889_95070049_95071199_95071353_95074284_95074376_95078561_95078667_95079284_95079389_95082319
ENSMUST00000182428.8	chr6	+	2264	18	FSM	ENSMUSG00000030314.17	ENSMUST00000182428.8	2264	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGGTCCTTCCATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	114620089	114836191	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114753917_114754041_114835951
ENSMUST00000182602.2	chr5	-	733	3	FSM	ENSMUSG00000029551.14	ENSMUST00000182602.2	733	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGGCCTTCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	139812598	139809367	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_139809829_139811882_139812120_139812563
ENSMUST00000182677.8	chr10	+	1425	8	FSM	ENSMUSG00000078452.11	ENSMUST00000182677.8	1425	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	22236450	22250038	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_22236551_22237474_22237545_22238169_22238261_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
ENSMUST00000182706.8	chr2	-	2525	15	FSM	ENSMUSG00000002107.19	ENSMUST00000182706.8	2525	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	7086053	6549651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6967189_6967226_7085917
ENSMUST00000182715.8	chr8	+	2516	8	NIC	ENSMUSG00000002342.18	novel	3018	12	NA	NA	0	-14	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTACTGTATTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	70625054	70636317	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_70625091_70626952_70627057_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUST00000182793.8	chr6	+	2459	20	FSM	ENSMUSG00000030314.17	ENSMUST00000182793.8	2459	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTGGGGCTCAGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	114620087	114836182	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_114620112_114623897_114624019_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUST00000182812.8	chr5	-	1093	9	ISM	ENSMUSG00000035325.17	ENST00000509142.5	3837	26	33381	552	25265	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTCTCCACAGCATCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	100530706	100510069	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100523066_100523191_100526686_100526861_100529018_100529193_100530620
ENSMUST00000182869.2	chr12	+	2031	4	FSM	ENSMUSG00000090812.9	ENSMUST00000182869.2	2031	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCAGTTCAGAGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	87247316	87260315	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_87248811_87249811_87249911_87255473_87255723_87260126
ENSMUST00000182879.8	chr2	-	2223	12	FSM	ENSMUSG00000002107.19	ENSMUST00000182879.8	2223	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	6726426	6549651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_6550487_6551852_6552025_6558595_6558776_6565469_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227
ENSMUST00000182886.8	chr5	-	4047	26	FSM	ENSMUSG00000035325.17	ENSMUST00000182886.8	4047	26	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATACAGTTAGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100564034	100509512	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100517454_100517494_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ENSMUST00000182902.8	chr6	+	2543	21	FSM	ENSMUSG00000030314.17	ENSMUST00000182902.8	2543	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	114620089	114836185	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_114620112_114648062_114648214_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUST00000182980.8	chr8	+	2080	11	FSM	ENSMUSG00000002342.18	ENSMUST00000182980.8	2080	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTTACCATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	70625057	70635500	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_70625091_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUST00000183037.3	chr10	+	735	6	FSM	ENSMUSG00000075706.12	ENSMUST00000183037.3	735	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTCACCCTGGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	79890298	79892228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ENSMUST00000183130.3	chr15	-	2458	2	FSM	ENSMUSG00000098176.3	ENSMUST00000183130.3	2458	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCGTTGTCTTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75854291	75851720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_75853537_75853649
ENSMUST00000183146.2	chr12	+	1383	1	FSM	ENSMUSG00000098134.2	ENSMUST00000183146.2	1383	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCCTGGTGTGATCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	84463969	84465352	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_84464000_84465400
ENSMUST00000183309.8	chr10	-	1296	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATGTCACAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	40123032	40099422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
ENSMUST00000183345.2	chr4	+	3545	5	FSM	ENSMUSG00000055963.13	ENSMUST00000183345.2	3545	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAATTTAGCATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	12906857	12983553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_12906939_12917915_12918066_12962944_12963024_12974729_12974816_12980404
ENSMUST00000183363.2	chr10	-	406	3	FSM	ENSMUSG00000063320.12	ENSMUST00000183363.2	406	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGGGGGCTCAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	82459024	82455859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_82456052_82458541_82458659_82458927
ENSMUST00000183484.2	chr3	-	359	3	NNC	ENSMUSG00000028044.7	novel	864	3	NA	NA	87	-287	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGACCATGTTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	89325526	89323150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_-_89323271_89323580_89323709_89325415
ENSMUST00000183898.2	chr19	+	431	3	NNC	ENSMUSG00000010097.16	novel	2407	21	NA	NA	12942	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTGGCTTGTTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	8747455	8748285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_8747478_8747623_8747685_8747937
ENSMUST00000183918.8	chr9	-	4308	14	FSM	ENSMUSG00000032228.17	ENSMUST00000183918.8	4308	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACTAGTGAGTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	71803678	71751554	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71803211
ENSMUST00000184550.8	chr3	-	1924	9	NIC	ENSMUSG00000028163.18	novel	3007	23	NA	NA	64003	-90	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTTAAAAGAAGAAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	135309557	135290505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_-_135291277_135295087_135295266_135296076_135296250_135297314_135297440_135299591_135299695_135299969_135300140_135300625_135300828_135307186_135307302_135309470
ENSMUST00000184554.8	chr7	-	782	5	FSM	ENSMUSG00000101970.9	ENSMUST00000184554.8	782	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCAGTTTGGGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	73207992	73193783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_73194159_73199344_73199401_73205002_73205082_73205602_73205669_73207786
ENSMUST00000184762.2	chr8	+	1524	1	FSM	ENSMUSG00000097882.3	ENSMUST00000184762.2	1524	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGCGATCTGCTAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	78243684	78245208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_78243700_78245200
ENSMUST00000184831.8	chr9	-	1652	11	FSM	ENSMUSG00000090626.10	ENSMUST00000184831.8	1652	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGATGTTGGAAGACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	72399494	72368356	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387205_72387284_72387878_72388058_72391350_72391397_72394061_72394142_72395293_72395358_72399020
ENSMUST00000185056.8	chr19	+	927	8	NIC	ENSMUSG00000010097.16	novel	4042	20	NA	NA	9527	-1740	intron_retention	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTGGTCTCAGAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	8744040	8746531	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_+_8744198_8744443_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364
ENSMUST00000185558.2	chr11	+	427	3	FSM	ENSMUSG00000078572.4	ENSMUST00000185558.2	427	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGATGATTTAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	119989769	119991189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_119989892_119989973_119990089_119990999
ENSMUST00000185641.7	chr15	-	731	5	FSM	ENSMUSG00000062683.12	ENSMUST00000185641.7	731	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	102579562	102571298	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145_102576215_102579452
ENSMUST00000185771.7	chr1	-	742	5	FSM	ENSMUSG00000079658.10	ENSMUST00000185771.7	742	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGCTGTAAAGCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	16727138	16713414	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16726519_16726684_16727045
ENSMUST00000186131.7	chr14	-	1005	4	FSM	ENSMUSG00000021917.17	ENSMUST00000186131.7	1005	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACATTTGTTTTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30723623	30721783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_30722180_30722634_30722722_30722800_30722861_30723161
ENSMUST00000186182.2	chr7	-	1512	7	FSM	ENSMUSG00000030591.18	ENSMUST00000186182.2	1512	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGTGTATCCAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	28880098	28873612	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
ENSMUST00000186207.7	chr7	+	3178	11	FSM	ENSMUSG00000030811.15	ENSMUST00000186207.7	3178	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTCCAGTTTGGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	127344372	127368099	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_127344505_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ENSMUST00000186239.7	chr10	-	2255	12	FSM	ENSMUSG00000019813.17	ENSMUST00000186239.7	2255	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	41685609	41594836	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41657479_41657547_41685568
ENSMUST00000186364.2	chr9	+	1471	9	FSM	ENSMUSG00000032369.14	ENSMUST00000186364.2	1471	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGAGTTGATGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	92132394	92154028	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_92132478_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
ENSMUST00000186375.8	chr16	+	2350	7	FSM	ENSMUSG00000005982.15	ENSMUST00000186375.8	2350	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	NA	NA	NA	NA	NA	NA	NA	3702546	3722634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718742_3719646_3719990_3721329
ENSMUST00000186450.2	chr9	-	554	3	FSM	ENSMUSG00000100130.2	ENSMUST00000186450.2	554	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAGTGAAACAGGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	66355778	66325584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_66325878_66355339_66355437_66355614
ENSMUST00000186507.2	chr1	-	951	1	FSM	ENSMUSG00000100309.2	ENSMUST00000186507.2	951	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2899	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGGCGAGCGGATCCC	NA	NA	NA	NA	NA	NA	NA	NA	55484183	55483232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_55483200_55484200
ENSMUST00000186693.2	chr9	+	595	3	FSM	ENSMUSG00000035048.14	ENSMUST00000186693.2	595	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCACTTGGTTTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	102503877	102511441	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_102504118_102506961_102507088_102511212
ENSMUST00000186870.7	chr3	-	1174	3	FSM	ENSMUSG00000078784.9	ENSMUST00000186870.7	1174	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTCTTTAAATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	14676321	14671348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_14672354_14674600_14674718_14676269
ENSMUST00000186932.2	chr1	+	476	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	5	-464	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGAAGATGAGGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	86454462	86457467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_86454673_86456496_86456579_86456894_86456967_86457177_86457275_86457452
ENSMUST00000187542.7	chr6	+	782	4	FSM	ENSMUSG00000101191.7	ENSMUST00000187542.7	782	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTCAAAAAAAAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	125458325	125461641	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_125458438_125459526_125459666_125460403_125460533_125461239
ENSMUST00000187973.2	chrX	-	582	1	FSM	ENSMUSG00000095597.3	ENSMUST00000187973.2	582	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAAATGACTGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	151693116	151692534	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_151692500_151693100
ENSMUST00000188028.7	chr1	+	1200	16	FSM	ENSMUSG00000026414.14	ENSMUST00000188028.7	1200	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATGGAATAGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	135764091	135779998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_135764185_135768602_135768651_135769638_135769650_135769752_135769765_135771522_135771553_135773292_135773383_135773635_135773672_135774459_135774494_135775446_135775511_135775718_135775836_135776548_135776627_135777087_135777199_135778448_135778559_135779089_135779181_135779433_135779475_135779764
ENSMUST00000188111.7	chr7	+	2131	7	FSM	ENSMUSG00000045411.17	ENSMUST00000188111.7	2131	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	43896158	43901741	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_43896233_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000188124.7	chr7	+	2048	10	FSM	ENSMUSG00000053877.13	ENSMUST00000188124.7	2048	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCAGTTATTGAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	127111154	127128494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128309
ENSMUST00000188260.7	chr3	-	739	3	FSM	ENSMUSG00000054426.12	ENSMUST00000188260.7	739	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTGGCTATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	115681743	115675229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_115675488_115679862_115680025_115681424
ENSMUST00000188371.7	chr1	+	2268	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAAGCTGGCATCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	15875869	15914276	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ENSMUST00000188642.2	chr13	+	674	3	FSM	ENSMUSG00000097709.9	ENSMUST00000188642.2	674	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGCTGTGATCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	3548044	3551393	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_3548157_3548274_3548359_3550915
ENSMUST00000188650.2	chr9	+	1508	8	FSM	ENSMUSG00000023277.14	ENSMUST00000188650.2	1508	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGAGCCTGGGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	106083996	106092586	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ENSMUST00000189013.8	chr16	-	982	6	FSM	ENSMUSG00000023791.19	ENSMUST00000189013.8	982	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTAGTTTGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	31918545	31903235	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918293
ENSMUST00000189443.2	chr1	+	756	6	NNC	ENSMUSG00000026342.11	novel	2733	16	NA	NA	23497	-672	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGGAACTCCTCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	125512249	125522885	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr1_+_125512295_125512810_125512971_125515101_125515193_125517575_125517703_125518769_125518867_125522649
ENSMUST00000189496.7	chr1	-	1392	6	FSM	ENSMUSG00000026219.15	ENST00000409677.5	1392	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATACTGACTGGCACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	84817022	84760547	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ENSMUST00000189732.7	chr1	+	1123	16	FSM	ENSMUSG00000026414.14	ENSMUST00000189732.7	1123	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATGGAATAGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	135764147	135779998	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_135764185_135768602_135768651_135769638_135769650_135769752_135769765_135773292_135773383_135773635_135773672_135774459_135774494_135775446_135775511_135775718_135775836_135776548_135776627_135777087_135777199_135778116_135778126_135778448_135778559_135779089_135779181_135779433_135779475_135779764
ENSMUST00000189936.7	chr1	+	1696	11	FSM	ENSMUSG00000018189.13	ENSMUST00000189936.7	1696	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTGGATTATTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	143653009	143683043	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
ENSMUST00000190157.7	chr8	-	1776	5	FSM	ENSMUSG00000071302.11	ENSMUST00000190157.7	1776	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAACAGAAAATATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	129960527	129942834	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_129944231_129946582_129946633_129948024_129948086_129948304_129948432_129960385
ENSMUST00000190496.2	chr17	+	1395	3	FSM	ENSMUSG00000034595.18	ENSMUST00000190496.2	1395	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCTGCCTTCCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	36179294	36186486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_36179678_36184617_36184832_36185688
ENSMUST00000190566.3	chr13	-	2406	4	FSM	ENSMUSG00000058883.17	ENSMUST00000190566.3	2406	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCAGTGTCGTGTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	67229609	67217462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_67219593_67222149_67222246_67222896_67222981_67229513
ENSMUST00000191273.7	chr4	-	1348	7	FSM	ENSMUSG00000028416.14	ENSMUST00000191273.7	1348	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGGCTCTGTGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	40948294	40936398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
ENSMUST00000191311.7	chr12	+	1486	17	NNC	ENSMUSG00000021219.17	novel	1621	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCAAGGCCCAGCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	82698602	83184449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_82698687_83032068_83032169_83094332_83094384_83098052_83098160_83099265_83099318_83106519_83106585_83110195_83110273_83112727_83112810_83114186_83114262_83116268_83116368_83117371_83117434_83138521_83138633_83153531_83153658_83162886_83163074_83180428_83180519_83184159_83184214_83184385
ENSMUST00000191368.7	chr1	+	1110	10	FSM	ENSMUSG00000034343.15	ENSMUST00000191368.7	1110	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATGCACACTCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	91178086	91213495	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_91178160_91181936_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUST00000191409.7	chr1	+	1049	5	FSM	ENSMUSG00000100009.7	ENSMUST00000191409.7	1049	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCCTGTTAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	98517241	98535109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_98517383_98524972_98525119_98532855_98532913_98533442_98533706_98534667
ENSMUST00000191689.6	chr1	+	2754	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTCTCTATGAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	171975684	172023074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ENSMUST00000191699.2	chr1	-	381	1	FSM	ENSMUSG00000102824.2	ENSMUST00000191699.2	381	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACGCGCTTAGACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	189010020	189009639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_189009600_189010000
ENSMUST00000192053.2	chr9	-	347	2	FSM	ENSMUSG00000104208.2	ENSMUST00000192053.2	347	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAAGTTAAGAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	108215472	108214287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_108214612_108215449
ENSMUST00000192076.3	chr1	+	2384	11	FSM	ENSMUSG00000072258.12	ENSMUST00000192076.3	2384	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTAGTATTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	183170324	183191020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
ENSMUST00000192248.2	chr1	-	1271	11	FSM	ENSMUSG00000026683.15	ENSMUST00000192248.2	1271	11	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAAAGTGTGGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	169358980	169337685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
ENSMUST00000192413.2	chr2	-	1943	1	FSM	ENSMUSG00000103009.2	ENSMUST00000192413.2	1943	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTTGTGAGGAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	129041114	129039171	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_129039200_129041100
ENSMUST00000192462.6	chr3	+	2505	9	FSM	ENSMUSG00000028199.19	ENSMUST00000192462.6	2505	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTTGTCTGTCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	154302347	154328817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ENSMUST00000192473.2	chr8	-	4097	1	FSM	ENSMUSG00000102615.2	ENSMUST00000192473.2	4097	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGTTTTGGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	15078422	15074325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_15074300_15078400
ENSMUST00000192584.2	chr9	-	2525	14	FSM	ENSMUSG00000039542.17	ENSMUST00000192584.2	2525	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGGTGACGAAATAATTA	NA	NA	NA	NA	NA	NA	NA	NA	49710058	49442575	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_49443274_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
ENSMUST00000192704.6	chr1	+	2859	14	FSM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	171975708	172023033	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ENSMUST00000192866.6	chr1	-	1844	12	FSM	ENSMUSG00000037395.17	ENSMUST00000192866.6	1844	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTACCAGTGCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	191822359	191785086	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_191785456_191785925_191786168_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ENSMUST00000192886.6	chr9	-	1094	3	FSM	ENSMUSG00000039461.13	ENSMUST00000192886.6	1094	3	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTTCTTTTTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	108183359	108180852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_108181453_108182524_108182580_108182920
ENSMUST00000192974.2	chr1	+	2384	1	FSM	ENSMUSG00000104114.2	ENSMUST00000192974.2	2384	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAATAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	89411159	89413543	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_89411200_89413500
ENSMUST00000193083.6	chr1	-	2277	9	FSM	ENSMUSG00000067653.13	ENSMUST00000193083.6	2277	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTTGCCTCATGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	36575602	36569268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_36570723_36570803_36570903_36570989_36571089_36571192_36571292_36571382_36571482_36571661_36571788_36573067_36573197_36573371_36573519_36575577
ENSMUST00000193168.2	chr3	+	552	4	NNC	ENSMUSG00000039221.11	novel	552	4	NA	NA	41	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATGGTTCATCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	28859658	28861571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_28859693_28860648_28860742_28860818_28861008_28861335
ENSMUST00000193210.6	chr1	+	865	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGCTAAAAATTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	36730564	36732762	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
ENSMUST00000193287.6	chr3	+	2211	7	FSM	ENSMUSG00000027667.14	ENSMUST00000193287.6	2211	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTCATAGTTACCACT	NA	NA	NA	NA	NA	NA	NA	NA	32564407	32574982	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_32564739_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ENSMUST00000193338.6	chr3	-	795	3	FSM	ENSMUSG00000028066.16	ENSMUST00000193338.6	795	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCTGTGAGGAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	88317633	88301449	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_88301878_88303211_88303408_88317462
ENSMUST00000193517.6	chr3	+	5151	9	FSM	ENSMUSG00000027763.14	ENSMUST00000193517.6	5151	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTGCCTGAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	60436451	60537169	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60529566_60529662_60532544_60532620_60533800
ENSMUST00000193667.6	chr1	-	553	3	FSM	ENSMUSG00000103308.6	ENSMUST00000193667.6	553	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTTGGTCAAGAATTATA	NA	NA	NA	NA	NA	NA	NA	NA	184361670	184342476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_184342774_184347667_184347890_184361636
ENSMUST00000193673.6	chr1	+	662	5	FSM	ENSMUSG00000026087.12	ENSMUST00000193673.6	662	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCGTTCAGTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	37929612	37937445	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_37929666_37933019_37933097_37934410_37934492_37936768_37936916_37937141
ENSMUST00000193683.6	chr1	+	1740	14	FSM	ENSMUSG00000026575.16	ENSMUST00000193683.6	1740	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTTATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	164135240	164264869	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_164135324_164135628_164135820_164140421_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
ENSMUST00000194248.2	chr4	+	936	8	FSM	ENSMUSG00000006395.17	ENSMUST00000194248.2	936	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATATGTGTATATTACAG	NA	NA	NA	NA	NA	NA	NA	NA	118217186	118219941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_118217429_118217502_118217587_118218812_118218928_118219070_118219150_118219237_118219288_118219387_118219458_118219559_118219695_118219780
ENSMUST00000194440.2	chr3	+	3263	17	FSM	ENSMUSG00000028068.15	ENSMUST00000194440.2	3263	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCCCTGCGTTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	88012448	88028351	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_88012578_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ENSMUST00000194444.2	chr1	-	653	1	FSM	ENSMUSG00000103669.2	ENSMUST00000194444.2	653	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	188943210	188942557	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_188942600_188943200
ENSMUST00000194478.6	chr4	-	2903	24	FSM	ENSMUSG00000028559.18	ENSMUST00000194478.6	2903	24	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAACCTGGCAGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	109059431	108918811	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108965077_108965147_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ENSMUST00000194594.2	chr1	+	1551	1	FSM	ENSMUSG00000103071.2	ENSMUST00000194594.2	1551	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGTGCAGGTCATATA	NA	NA	NA	NA	NA	NA	NA	NA	44796101	44797652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_44796100_44797700
ENSMUST00000194746.6	chr1	+	703	4	FSM	ENSMUSG00000073702.12	ENSMUST00000194746.6	703	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTTTGGTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	39406958	39410447	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034
ENSMUST00000194863.2	chr9	+	885	6	NNC	ENSMUSG00000006676.17	novel	4557	26	NA	NA	6233	-2500	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAAAGGTGCCTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	108374287	108376396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_108374367_108375094_108375236_108375330_108375441_108375640_108375779_108375878_108376193_108376293
ENSMUST00000194875.6	chr9	+	748	3	FSM	ENSMUSG00000032599.13	ENSMUST00000194875.6	748	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTGGCTCACCCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	108661063	108674891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_108661070_108673262_108673596_108674482
ENSMUST00000194876.6	chr3	+	1059	9	FSM	ENSMUSG00000028199.19	ENSMUST00000192462.6	2505	9	433	1013	433	-1013	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTATCCATTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	154302780	154327804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ENSMUST00000194967.2	chr9	-	658	4	NNC	ENSMUSG00000037190.13	novel	1162	4	NA	NA	66	-467	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGCCAGCCTCCTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	107419326	107417240	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_-_107417585_107418201_107418269_107418695_107418850_107419233
ENSMUST00000195229.2	chr18	-	581	5	NNC	ENSMUSG00000024579.8	novel	2017	6	NA	NA	22	-2638	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCGGGGGTAGAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	61840684	61832545	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_61832576_61835266_61835442_61836416_61836466_61836582_61836790_61840564
ENSMUST00000195247.6	chr1	-	1699	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195247.6	1699	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACATGTCTGTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	38036974	38026474	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036244
ENSMUST00000195400.2	chr1	-	2071	1	FSM	ENSMUSG00000104060.2	ENSMUST00000195400.2	2071	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAACCAAAAAGAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	131306269	131304198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_-_131304200_131306300
ENSMUST00000195426.2	chr1	+	1746	1	FSM	ENSMUSG00000102700.2	ENSMUST00000195426.2	1746	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGGAGAAAAATCATT	NA	NA	NA	NA	NA	NA	NA	NA	89024794	89026540	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_89024800_89026500
ENSMUST00000195713.2	chr2	-	686	8	NNC	ENSMUSG00000026792.17	novel	2142	23	NA	NA	17762	-2815	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGAGATCTGGCTAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	32831841	32819602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr2_-_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830247_32830353_32831814
ENSMUST00000195752.6	chr9	+	2062	5	FSM	ENSMUSG00000010047.13	ENSMUST00000195752.6	2062	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTCTTTTTCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	107445143	107449978	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_107445176_107446181_107446433_107447302_107448270_107448690_107448781_107449256
ENSMUST00000195827.6	chr3	+	473	4	NNC	ENSMUSG00000039221.11	novel	552	4	NA	NA	194	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAACATGTATGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	28859811	28861564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_28859844_28860651_28860742_28860885_28861008_28861335
ENSMUST00000195970.5	chr14	-	2057	10	FSM	ENSMUSG00000000958.11	ENSMUST00000195970.5	2057	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCTGAGTGGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	54647673	54606901	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54647534
ENSMUST00000196069.5	chr5	+	1150	4	FSM	ENSMUSG00000007812.17	ENSMUST00000196069.5	1150	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTACTTTTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	145168538	145174658	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145173859
ENSMUST00000196130.5	chr5	-	2547	10	FSM	ENSMUSG00000029560.13	ENSMUST00000196130.5	2547	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTTCCACGCTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	140346170	140326055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946
ENSMUST00000196143.2	chr3	+	1657	7	FSM	ENSMUSG00000028140.14	ENSMUST00000196143.2	1657	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGGCTCCATTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	94350643	94358437	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94357457
ENSMUST00000196188.5	chr3	-	323	3	ISM	ENSMUSG00000062908.13	ENST00000370834.9	1248	10	494	13385	494	-13385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAACTGGTAGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	153644311	153641941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_153642063_153643339_153643421_153644190
ENSMUST00000196397.5	chr5	-	2797	9	FSM	ENSMUSG00000005057.14	ENSMUST00000196397.5	2797	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTCTCCTGTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	136273708	136247000	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_136248007_136248495_136248668_136250701_136250911_136253008_136253177_136253258_136253351_136254057_136254150_136256220_136256323_136260506_136261241_136273486
ENSMUST00000196466.2	chr3	-	448	3	FSM	ENSMUSG00000104960.2	ENSMUST00000196466.2	448	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCCTGTTTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	123302053	123301200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_123301310_123301465_123301512_123301760
ENSMUST00000196629.2	chr5	+	2265	1	FSM	ENSMUSG00000097287.4	ENSMUST00000196629.2	2265	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCTTCTTGCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	143752065	143754330	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_143752100_143754300
ENSMUST00000196667.5	chr5	-	675	7	NNC	ENSMUSG00000047215.15	novel	738	8	NA	NA	19	-14	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTATATATTGATTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	65548329	65545720	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_65545811_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288
ENSMUST00000196709.5	chr3	-	1382	11	FSM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	89009195	89000894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89008227_89008444_89009168
ENSMUST00000196739.5	chr3	+	2526	20	FSM	ENSMUSG00000028034.16	ENSMUST00000196739.5	2526	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	151916134	151938408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151937891
ENSMUST00000196750.2	chr5	+	1272	4	FSM	ENSMUSG00000040118.16	ENSMUST00000196750.2	1272	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTTGCTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	16139908	16294020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_16140107_16217391_16217474_16230746_16230864_16293145
ENSMUST00000196810.2	chr5	+	993	1	FSM	ENSMUSG00000106339.2	ENSMUST00000196810.2	993	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGAATAAGTCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	16777948	16778941	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_16777900_16778900
ENSMUST00000196908.5	chr3	-	1196	8	FSM	ENSMUSG00000028273.16	ENSMUST00000196908.5	1196	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAATTGGTGTGCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	142101379	142008981	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_142009183_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ENSMUST00000196981.5	chr9	+	1839	15	FSM	ENSMUSG00000032497.20	ENSMUST00000196981.5	1839	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGGATTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	110947180	111053290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ENSMUST00000197082.5	chr5	+	1943	10	FSM	ENSMUSG00000058503.12	ENSMUST00000197082.5	1943	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTGTCTTTGTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	3593832	3620238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3614240_3614328_3615702_3615751_3618986
ENSMUST00000197257.2	chr5	-	1386	1	FSM	ENSMUSG00000106607.2	ENSMUST00000197257.2	1386	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAGAATATAAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	52333097	52331711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_52331700_52333100
ENSMUST00000197361.5	chr3	-	329	4	FSM	ENSMUSG00000090733.7	ENSMUST00000197361.5	329	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTTTGTCTTGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	90120955	90119977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_90120048_90120240_90120352_90120499_90120609_90120916
ENSMUST00000197370.5	chr3	-	655	3	FSM	ENSMUSG00000105837.5	ENSMUST00000197370.5	655	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAACCCATTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	129325758	129321115	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_129321464_129324707_129324814_129325557
ENSMUST00000197407.5	chr5	+	3546	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTGGTCTGACGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	24890529	24915374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ENSMUST00000197694.5	chr3	+	2129	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	34074256	34123494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ENSMUST00000197767.5	chr3	-	1092	7	FSM	ENSMUSG00000027944.14	ENSMUST00000197767.5	1092	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTAGTCTTGGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	89905973	89902759	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904873_89905044_89905311_89905834
ENSMUST00000197889.2	chr3	+	2251	1	FSM	ENSMUSG00000106290.2	ENSMUST00000197889.2	2251	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAAAGTGTGTGGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	135566108	135568359	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_135566100_135568400
ENSMUST00000197946.5	chr5	-	1206	6	FSM	ENSMUSG00000015806.13	ENSMUST00000197946.5	1206	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTACACATAGGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	45607463	45591369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_45592021_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
ENSMUST00000198011.2	chr3	-	1786	1	FSM	ENSMUSG00000105676.2	ENSMUST00000198011.2	1786	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTCTGTGGCGCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	137570135	137568349	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_137568300_137570100
ENSMUST00000198051.5	chr3	+	2127	15	FSM	ENSMUSG00000027680.16	ENSMUST00000198051.5	2127	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	34074253	34123494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34123065
ENSMUST00000198126.2	chr3	+	956	7	NIC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	88	2	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1058	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGAGTTTTCAGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	138148941	138160564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_+_138148955_138151050_138151153_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428
ENSMUST00000198128.2	chr3	+	464	3	FSM	ENSMUSG00000001025.9	ENSMUST00000198128.2	464	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCATGTGTTCTGGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	90520611	90521721	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_90520690_90521049_90521212_90521497
ENSMUST00000198685.5	chr3	+	666	7	NNC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	-22	-2215	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGTATGCAATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	135144303	135168802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_135144460_135145421_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710
ENSMUST00000198720.2	chr5	+	837	6	FSM	ENSMUSG00000097145.6	ENSMUST00000198720.2	837	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAATCTCTCAATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	52348054	52403238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_52348280_52350259_52350321_52352142_52352233_52354234_52354366_52369384_52369495_52403018
ENSMUST00000198748.5	chr3	+	787	9	NNC	ENSMUSG00000078578.10	novel	3833	8	NA	NA	189	11	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTTGATTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	135144514	135171058	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135162361_135162406_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUST00000198760.2	chr5	-	1067	1	FSM	ENSMUSG00000105454.2	ENSMUST00000198760.2	1067	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAAAAAAAAGAAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	48949308	48948241	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_48948200_48949300
ENSMUST00000198878.2	chr3	+	2050	13	FSM	ENSMUSG00000028173.11	ENSMUST00000198878.2	2050	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATTATTTCCGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	159545373	159644300	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886_159640006_159644090
ENSMUST00000199306.2	chr5	-	922	4	NNC	ENSMUSG00000066278.7	novel	2522	4	NA	NA	20557	-1495	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGCCCACCTGATTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	124149776	124144198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_-_124144802_124145671_124145755_124148750_124148923_124149712
ENSMUST00000199317.2	chr3	+	743	4	FSM	ENSMUSG00000087260.6	ENSMUST00000199317.2	743	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTCATTTCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	107186314	107191398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_107186430_107187185_107187248_107189224_107189343_107190950
ENSMUST00000199611.5	chr9	+	435	5	NNC	ENSMUSG00000019659.9	novel	834	7	NA	NA	109	-93	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCAAAGCTGGGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	110485679	110540581	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_110485720_110539003_110539024_110539194_110539230_110540153_110540231_110540318
ENSMUST00000200084.2	chr3	+	3063	1	FSM	ENSMUSG00000106427.2	ENSMUST00000200084.2	3063	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	98028903	98031966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_+_98028900_98032000
ENSMUST00000200086.5	chr3	+	2158	15	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	0	26	intron_retention	FALSE	canonical	NA	NA	NA	NA	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGGGGGAGGTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	34074246	34123520	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr3_+_34074313_34093675_34093729_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ENSMUST00000200216.5	chr3	-	2300	4	ISM	ENSMUSG00000028184.13	ENST00000674208.1	5097	21	130964	-626	-792	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACGTGCACTTTTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	148529407	148521490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_148523565_148526608_148526662_148528590_148528688_148529331
ENSMUST00000200236.2	chr3	-	1716	4	FSM	ENSMUSG00000027983.14	ENSMUST00000200236.2	1716	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCTATGGACAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	131096849	131086936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_131087334_131089036_131089199_131091434_131092071_131096328
ENSMUST00000200250.5	chr3	-	690	6	ISM	ENSMUSG00000062908.13	ENST00000370834.9	1248	10	1359	2888	1359	-2888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTATGCCTCGATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	153643446	153631444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr3_-_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339
ENSMUST00000200556.5	chr5	+	648	6	NNC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	20	-2558	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGCCTTCTTAAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	135807538	135816505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr5_+_135807656_135812227_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394
ENSMUST00000200657.5	chr5	-	1668	10	FSM	ENSMUSG00000035234.19	ENSMUST00000117364.8	1657	10	0	-11	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAATATCTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	100968806	100953057	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_100953318_100953763_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ENSMUST00000200692.4	chr5	+	1816	7	FSM	ENSMUSG00000029166.15	ENSMUST00000200692.4	1816	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGATTTCCTCAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	30972097	31023403	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_30972243_31019150_31019279_31019841_31019988_31020547_31020705_31021917_31022073_31022158_31022312_31022471
ENSMUST00000200744.4	chr5	-	1653	7	FSM	ENSMUSG00000107283.4	ENSMUST00000200744.4	1653	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAATTGTGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	31311566	31298006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_31299195_31302043_31302097_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
ENSMUST00000200889.4	chr10	+	2384	4	FSM	ENSMUSG00000096795.5	ENSMUST00000200889.4	2384	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATACTGCCATCCATT	NA	NA	NA	NA	NA	NA	NA	NA	81540658	81557810	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_81540735_81554752_81554880_81555078_81555140_81555690
ENSMUST00000201015.4	chr11	+	1789	12	FSM	ENSMUSG00000042331.14	ENSMUST00000201015.4	1789	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTGCTCCCAGTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	61967824	62110410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_61968063_62019025_62019234_62022655_62022730_62023101_62023308_62037131_62037278_62038393_62038495_62042695_62042778_62047312_62047467_62052633_62052737_62096209_62096327_62102469_62102530_62110110
ENSMUST00000201035.2	chr5	+	1721	1	FSM	ENSMUSG00000107164.2	ENSMUST00000201035.2	1721	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTTAGTTACTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	149365325	149367046	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_149365300_149367000
ENSMUST00000201068.4	chrX	+	1298	5	FSM	ENSMUSG00000016308.13	ENSMUST00000201068.4	1298	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTTATGATTCACG	NA	NA	NA	NA	NA	NA	NA	NA	36137993	36147577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36146251_36146341_36146664
ENSMUST00000201125.4	chr5	+	1352	9	FSM	ENSMUSG00000006638.16	ENSMUST00000201125.4	1352	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCTGAGGTTCCCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	31107409	31112435	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_31107593_31110228_31110390_31110686_31110870_31111010_31111057_31111222_31111336_31111434_31111610_31111748_31111798_31111877_31112044_31112159
ENSMUST00000201162.2	chr7	+	2129	3	NNC	ENSMUSG00000025326.13	novel	4911	11	NA	NA	71240	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTGTGTTCTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	58949789	58956477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_58949855_58953415_58953560_58954557
ENSMUST00000201353.4	chr5	-	846	8	FSM	ENSMUSG00000107283.4	ENSMUST00000201353.4	846	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACACGCATTTGTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	31311496	31298859	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311451
ENSMUST00000201469.4	chr5	+	4892	13	FSM	ENSMUSG00000039156.20	ENSMUST00000201469.4	4892	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTGGTTTTTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	54155906	54278399	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267457_54267482_54267878_54267980_54268213_54268453_54273260_54273535_54275613
ENSMUST00000201863.4	chr1	+	883	5	FSM	ENSMUSG00000026278.15	ENSMUST00000201863.4	883	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGCCTCCAGTACCTAC	NA	NA	NA	NA	NA	NA	NA	NA	93613423	93622932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr1_+_93613577_93614128_93614392_93616878_93617008_93621781_93621946_93622758
ENSMUST00000201882.4	chr7	+	1497	15	FSM	ENSMUSG00000002963.18	ENST00000600910.5	1447	15	-26	-24	-26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	44506817	44512074	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511617_44511706_44511789_44511852_44511922
ENSMUST00000202135.2	chr5	-	660	2	ISM	ENSMUSG00000037373.13	ENSMUST00000202868.4	2436	10	25742	414	25731	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCAGCAAGTCAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	33406594	33405511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33406028_33406450
ENSMUST00000202258.4	chr5	-	1884	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	92231517	92202358	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ENSMUST00000202273.4	chr5	+	660	5	ISM	ENSMUSG00000029141.17	ENST00000419995.2	606	6	3372	-254	3372	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGATGATCATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	31701126	31711386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_+_31701258_31703523_31703611_31705957_31706026_31708056_31708127_31711082
ENSMUST00000202709.2	chr5	-	945	1	FSM	ENSMUSG00000106785.2	ENSMUST00000202709.2	945	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAACTCCTTCCTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	67196719	67195774	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_67195800_67196700
ENSMUST00000202769.2	chr5	+	1408	9	FSM	ENSMUSG00000062077.15	ENSMUST00000202769.2	1408	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTCCTTTTGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	31274077	31294974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_31274422_31288385_31288559_31289331_31289504_31291393_31291490_31293386_31293621_31294096_31294120_31294231_31294357_31294464_31294558_31294826
ENSMUST00000202820.4	chr5	-	539	4	ISM	ENSMUSG00000037373.13	ENSMUST00000202962.4	3595	7	5345	11276	5345	-11276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGACTCCACCCTGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	33426980	33416644	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr5_-_33416689_33418352_33418498_33424226_33424382_33426785
ENSMUST00000202887.2	chr5	+	1197	1	FSM	ENSMUSG00000107331.2	ENSMUST00000202887.2	1197	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAACTGAGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73468706	73469903	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_+_73468700_73469900
ENSMUST00000203578.3	chr6	+	1323	5	FSM	ENSMUSG00000079426.14	ENSMUST00000203578.3	1323	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTGTGCTCTGTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	113355107	113366613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_113355170_113358923_113359036_113361042_113361139_113362450_113362622_113365731
ENSMUST00000203633.3	chr7	+	898	7	FSM	ENSMUSG00000107482.3	ENSMUST00000203633.3	898	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGGAATCCCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	43093551	43112928	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43105902_43106062_43112560_43112697_43112783
ENSMUST00000203732.3	chr6	+	1826	8	FSM	ENSMUSG00000000440.13	ENSMUST00000203732.3	1826	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTGTTTATAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	115339252	115467355	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_115339379_115360639_115360705_115416800_115417029_115418452_115418623_115427904_115428044_115440046_115440247_115449821_115450273_115466908
ENSMUST00000203816.2	chr6	-	906	3	FSM	ENSMUSG00000057841.6	ENSMUST00000203816.2	906	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTATTTTCTATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	115785309	115782472	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_115782650_115783946_115784129_115784762
ENSMUST00000203819.2	chr3	-	1106	1	FSM	ENSMUSG00000107524.2	ENSMUST00000203819.2	1106	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCTGGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	40819488	40818382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_40818400_40819500
ENSMUST00000203847.3	chr6	-	1421	9	NNC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	53	-711	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGCCGTTTTAGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83294535	83283383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83289727_83289828_83290343_83290529_83294410
ENSMUST00000203883.3	chr3	-	881	6	FSM	ENSMUSG00000028141.13	ENSMUST00000203883.3	881	6	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	2810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGCTGTTTCTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	94351140	94340693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr3_-_94340948_94341770_94341857_94342277_94342454_94343262_94343341_94343341_94343433_94350944
ENSMUST00000203964.2	chr2	-	1628	1	FSM	ENSMUSG00000107535.2	ENSMUST00000203964.2	1628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	38456366	38454738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_38454700_38456400
ENSMUST00000204008.3	chr6	+	713	6	FSM	ENSMUSG00000097048.8	ENSMUST00000204008.3	713	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTATTTTTAAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	86503228	86541431	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_86503265_86504872_86504957_86509174_86509290_86527898_86528097_86540413_86540520_86541257
ENSMUST00000204158.3	chr6	-	1542	11	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	51446825	51438103	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUST00000204224.3	chr6	-	3367	11	FSM	ENSMUSG00000061838.8	ENSMUST00000204224.3	3367	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCAGTAGTGTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	95695781	95449989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ENSMUST00000204254.2	chr6	+	1147	2	FSM	ENSMUSG00000051256.11	ENSMUST00000204254.2	1147	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTAAGACTGTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	113419570	113425170	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_113419766_113424218
ENSMUST00000204293.3	chr6	+	1336	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	67243993	67261031	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUST00000204714.2	chr6	-	452	5	FSM	ENSMUSG00000029632.8	ENSMUST00000204714.2	452	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGCGTGTCACTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	11907496	11900374	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_11900591_11905200_11905262_11906018_11906108_11907322_11907384_11907471
ENSMUST00000204765.3	chr6	+	1738	12	FSM	ENSMUSG00000002871.15	ENSMUST00000204765.3	1738	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGTGAGCTGATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	88879314	88889213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_88879513_88882930_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887384_88887529_88887633_88887778_88887860_88888664
ENSMUST00000204890.3	chr6	-	1614	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204890.3	1614	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	87828012	87820063	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822655_87822776_87827885
ENSMUST00000204978.3	chr6	-	610	4	FSM	ENSMUSG00000029632.8	ENSMUST00000204978.3	610	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTTGAATTTCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	11907482	11900290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_11900591_11905200_11905262_11906018_11906108_11907322
ENSMUST00000205279.2	chr7	+	897	6	NNC	ENSMUSG00000075701.11	novel	1191	6	NA	NA	9	-67	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGATGATACTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	65729434	65738868	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_65729567_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737020_65738514
ENSMUST00000205287.2	chr7	+	1375	6	FSM	ENSMUSG00000035585.17	ENSMUST00000205287.2	1375	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTGTTCTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	3696761	3703886	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3703526
ENSMUST00000205338.2	chr7	-	2071	5	FSM	ENSMUSG00000056383.11	ENSMUST00000205338.2	2071	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	41042803	41023213	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41037531_41037680_41042650
ENSMUST00000205370.2	chr6	+	1560	1	FSM	ENSMUSG00000108591.2	ENSMUST00000205370.2	1560	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTGGAGTCTGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	72416033	72417593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_72416000_72417600
ENSMUST00000205379.2	chr9	+	4001	12	FSM	ENSMUSG00000032384.17	ENSMUST00000205379.2	4001	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCAGGAAATGGTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	65816205	65949188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_65816451_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65939520_65939628_65946858
ENSMUST00000205428.2	chr7	+	1945	9	FSM	ENSMUSG00000054342.9	ENSMUST00000205428.2	1945	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACAGCAGCTGCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	24069687	24084630	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_24070021_24074096_24074193_24076707_24077130_24078558_24078695_24081076_24081188_24081586_24081706_24081896_24081967_24083433_24083608_24084146
ENSMUST00000205679.3	chr16	+	1866	17	FSM	ENSMUSG00000075704.18	ENSMUST00000205679.3	1866	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATGTCTGCGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	18245133	18297817	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_18245310_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262025_18272470_18272491_18273238_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
ENSMUST00000205874.2	chr7	-	1907	6	FSM	ENSMUSG00000063047.10	ENSMUST00000205874.2	1907	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTCATCATGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	27678564	27658559	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_27660056_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
ENSMUST00000206517.2	chr7	+	905	6	FSM	ENSMUSG00000078681.11	ENSMUST00000206517.2	905	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACGACAACCCAGAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	65343224	65351650	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_65343318_65343598_65343692_65344917_65345076_65347443_65347619_65348839_65348916_65351340
ENSMUST00000206570.2	chr7	-	1400	8	FSM	ENSMUSG00000030697.8	ENSMUST00000206570.2	1400	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTAGGTTCTGTCAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	126391512	126385039	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232
ENSMUST00000206692.2	chr6	-	1400	9	FSM	ENSMUSG00000053907.11	ENSMUST00000206692.2	1400	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATACTTTCGCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	72416539	72411527	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_72411723_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ENSMUST00000206772.2	chr7	+	653	7	FSM	ENSMUSG00000030672.13	ENSMUST00000206772.2	653	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	126808070	126813460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_126808124_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ENSMUST00000206862.2	chr7	+	2908	24	NIC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	29604	-6511	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCAATGCTGTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	55521606	55573708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_55521725_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622
ENSMUST00000206887.2	chr7	+	693	4	FSM	ENSMUSG00000038695.14	ENSMUST00000206887.2	693	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGCCTGGGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	44117445	44121073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_44117615_44118230_44118394_44119835_44119962_44120838
ENSMUST00000206947.2	chr6	+	618	4	FSM	ENSMUSG00000034192.6	ENSMUST00000206947.2	618	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTTTTTTTTTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	91493029	91499602	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_91493061_91494029_91494141_91496530_91496627_91499222
ENSMUST00000207008.2	chr7	-	1628	1	FSM	ENSMUSG00000108533.2	ENSMUST00000207008.2	1628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTTGCTCAGCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	65130969	65129341	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_65129300_65131000
ENSMUST00000207082.2	chr7	-	1241	9	ISM	ENSMUSG00000001794.14	ENSMUST00000108196.8	1192	10	134	-54	134	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGTTATTTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	29892397	29886360	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291
ENSMUST00000207309.2	chr7	-	835	4	FSM	ENSMUSG00000062797.15	ENSMUST00000207309.2	835	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	89590334	89567895	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_89568216_89569280_89569400_89584934_89585173_89590176
ENSMUST00000207351.2	chr7	+	740	5	NNC	ENSMUSG00000030876.8	novel	1823	5	NA	NA	1166	-618	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAAAGCCGGCTTTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	120634833	120675440	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_120634900_120647060_120647252_120651309_120651520_120656437_120656623_120675352
ENSMUST00000207594.2	chr7	+	2245	9	FSM	ENSMUSG00000061119.8	ENSMUST00000207594.2	2245	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTGAAAAAGTAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	92524507	92583222	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92566930_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ENSMUST00000207628.2	chr7	-	576	3	FSM	ENSMUSG00000046792.9	ENSMUST00000207628.2	576	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAACTCGAAGTTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	6158996	6145284	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_6145619_6146060_6146150_6158843
ENSMUST00000207747.2	chr7	-	669	3	FSM	ENSMUSG00000036835.8	ENSMUST00000207747.2	669	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTTCTTGGGATCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	30262512	30261287	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30261560_30261748_30261854_30262220
ENSMUST00000207748.2	chr7	+	1116	7	NNC	ENSMUSG00000033685.14	novel	3988	8	NA	NA	49	-3104	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTCAGATCCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	100142592	100148123	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_100142673_100143458_100143583_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942
ENSMUST00000207849.2	chr7	-	2128	6	FSM	ENSMUSG00000070436.13	ENSMUST00000207849.2	2128	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATATCATTCTTTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	99002321	98994601	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99001030_99001075_99002259
ENSMUST00000207883.2	chr7	+	3431	4	FSM	ENSMUSG00000055407.15	ENSMUST00000207883.2	3431	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTCTCTGGCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98916653	98986344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_98918521_98964895_98965110_98966678_98966876_98985191
ENSMUST00000207901.2	chr7	+	1263	3	FSM	ENSMUSG00000051184.8	ENSMUST00000207901.2	1263	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACTGTGTGTTCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	5017413	5021487	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_5017526_5019944_5020044_5020435
ENSMUST00000208040.2	chr7	-	923	5	NNC	ENSMUSG00000033917.16	novel	1582	6	NA	NA	30	-3057	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGATTTTGTCTCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	118304971	118290824	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_118291018_118293715_118293809_118294258_118294365_118297777_118297950_118304612
ENSMUST00000208043.2	chr17	-	2987	11	FSM	ENSMUSG00000025728.17	ENSMUST00000208043.2	2987	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCAGCTTGGGTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	26161797	26145400	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26161743
ENSMUST00000208119.2	chr7	-	2173	6	FSM	ENSMUSG00000070436.13	ENSMUST00000208119.2	2173	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATTCTTTCTAAGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	99002321	98994596	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002088_99002173_99002259
ENSMUST00000208316.2	chr8	+	1190	5	FSM	ENSMUSG00000011837.5	ENSMUST00000208316.2	1190	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTGATTCCCCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	4303093	4306218	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_4303305_4304281_4304402_4304550_4304582_4305283_4305374_4305480
ENSMUST00000208488.2	chr8	-	2403	13	FSM	ENSMUSG00000062991.10	ENSMUST00000208488.2	2403	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATTTATTTTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	32499479	32307986	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_32308711_32311269_32311477_32312254_32312386_32314471_32314599_32316280_32316384_32323180_32323259_32327697_32327757_32339337_32339468_32437011_32437063_32439944_32439996_32448539_32448662_32458035_32458214_32499037
ENSMUST00000208605.2	chr7	+	2275	3	FSM	ENSMUSG00000055407.15	ENSMUST00000208605.2	2275	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTCTCTGGCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98917612	98986344	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_98918521_98964895_98965110_98985191
ENSMUST00000208634.2	chr7	+	2127	10	FSM	ENSMUSG00000035203.17	ENSMUST00000208634.2	2127	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGTGGCTCCCTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	5086753	5101175	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
ENSMUST00000208689.2	chr7	-	397	1	FSM	ENSMUSG00000109509.2	ENSMUST00000208689.2	397	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATTTTGGCTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30184522	30184125	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_30184100_30184500
ENSMUST00000208743.2	chr7	+	3878	18	NNC	ENSMUSG00000030852.19	novel	3940	18	NA	NA	0	16	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGCATGTTTCAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	130294285	130366454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_+_130294718_130318432_130318570_130330252_130331559_130333260_130333297_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130346256_130346347_130352919_130353064_130353563_130353641_130355347_130355392_130360896_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUST00000209099.2	chr7	+	2088	12	FSM	ENSMUSG00000030435.17	ENSMUST00000209099.2	2088	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGGATCCTCATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	5065243	5082932	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
ENSMUST00000209350.2	chr7	+	2466	7	FSM	ENSMUSG00000002781.20	ENSMUST00000209350.2	2466	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCTGGAGTAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	45546524	45566833	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
ENSMUST00000209363.2	chr8	-	1251	8	FSM	ENSMUSG00000031712.11	ENSMUST00000209363.2	1251	8	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTAACTCTTACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	83129199	83058260	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_83058654_83061097_83061236_83064194_83064240_83069867_83069953_83071003_83071102_83072228_83072328_83106122_83106245_83128928
ENSMUST00000209469.2	chr19	+	2354	4	FSM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	5540482	5545229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408
ENSMUST00000209500.2	chr7	+	1560	5	FSM	ENSMUSG00000038618.13	ENSMUST00000209500.2	1560	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTCAGTGTGTCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	140795806	140798568	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140798082_140798182
ENSMUST00000209548.2	chr7	+	1277	7	NIC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	2	-188	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCGTATAACCTGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	46495266	46504862	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46503406_46503531_46504400
ENSMUST00000209619.2	chr8	-	1789	1	FSM	ENSMUSG00000109956.2	ENSMUST00000209619.2	1789	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAATGTAGTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	92034383	92032594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_92032600_92034400
ENSMUST00000209667.2	chr12	-	1635	10	FSM	ENSMUSG00000004698.12	ENSMUST00000209667.2	1635	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAGATAGGTGGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	34578303	34423825	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_34424138_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34479496_34479619_34481861_34481989_34483079_34483222_34487135_34487378_34578281
ENSMUST00000209812.2	chr7	-	690	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	38	25	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTCCTTAGGCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	44778147	44775295	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776512_44776632_44776699_44776919_44776993_44778123
ENSMUST00000209984.2	chr7	+	1815	8	FSM	ENSMUSG00000063229.16	ENSMUST00000209984.2	1815	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTGCTCTTTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	46496505	46505050	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_46496813_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ENSMUST00000210005.2	chr8	+	1914	10	FSM	ENSMUSG00000019139.11	ENSMUST00000210005.2	1914	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTGTGTGCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	71047130	71049940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ENSMUST00000210060.2	chr7	-	2577	6	FSM	ENSMUSG00000057342.16	ENSMUST00000210060.2	2577	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGACATCCCTTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	45367326	45359690	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45367124
ENSMUST00000210192.2	chr7	+	1258	7	FSM	ENSMUSG00000030688.16	ENSMUST00000210192.2	1258	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTCTTTGTGCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	100970659	100995515	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_100970758_100970920_100971241_100991704_100991853_100992390_100992495_100993123_100993242_100994841_100994895_100995098
ENSMUST00000210275.2	chr5	-	1776	4	FSM	ENSMUSG00000090963.3	ENSMUST00000210275.2	1776	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAGATATGGTAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	110220379	110194004	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr5_-_110195551_110196887_110196949_110197131_110197259_110220337
ENSMUST00000210297.2	chr7	-	601	5	FSM	ENSMUSG00000040212.13	ENSMUST00000210297.2	601	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGCCTGACTCGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	45570586	45567454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_45567660_45568741_45568883_45569358_45569462_45569712_45569829_45570550
ENSMUST00000210343.2	chr8	-	879	1	FSM	ENSMUSG00000109610.2	ENSMUST00000210343.2	879	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	855	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGTTTTTATATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	61834421	61833542	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_61833500_61834400
ENSMUST00000210390.2	chr8	+	1326	1	FSM	ENSMUSG00000109941.2	ENSMUST00000210390.2	1326	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTGAGTCTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	111782970	111784296	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_111783000_111784300
ENSMUST00000210658.2	chr16	+	1105	4	FSM	ENSMUSG00000109783.2	ENSMUST00000210658.2	1105	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATGAACCATGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	23339010	23353841	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_23339225_23340436_23340704_23346244_23346357_23353329
ENSMUST00000210738.2	chr16	+	527	3	FSM	ENSMUSG00000109857.2	ENSMUST00000210738.2	527	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACTAATTCCCTTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	13280409	13285101	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_13280461_13281736_13281802_13284690
ENSMUST00000210803.2	chr7	+	590	5	FSM	ENSMUSG00000037772.14	ENSMUST00000210803.2	590	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGACACTTTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	142086897	142094484	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_142086979_142088741_142088865_142089806_142089890_142091003_142091078_142094255
ENSMUST00000210987.2	chr8	+	636	4	FSM	ENSMUSG00000031848.16	ENSMUST00000210987.2	636	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGCCAGCTGTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	71126081	71131396	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_71126108_71129204_71129247_71130603_71130785_71131009
ENSMUST00000211061.2	chr7	+	552	5	FSM	ENSMUSG00000059070.17	ENSMUST00000211061.2	552	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGATGGTCCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	45367522	45370247	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_45367564_45368952_45369061_45369343_45369443_45369717_45369912_45370137
ENSMUST00000211176.2	chr7	+	515	3	FSM	ENSMUSG00000109602.2	ENSMUST00000211176.2	515	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGTGTTTCCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	45391472	45399681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_45391556_45394417_45394490_45399321
ENSMUST00000211253.2	chr8	+	1405	3	FSM	ENSMUSG00000109704.2	ENSMUST00000211253.2	1405	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	36626632	36628742	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_36626734_36626900_36627001_36627538
ENSMUST00000211344.2	chr7	-	606	5	FSM	ENSMUSG00000033916.6	ENSMUST00000211344.2	606	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAAGGCTGTGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	12768571	12765940	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12767755_12767970_12768561
ENSMUST00000211443.2	chr16	+	767	4	FSM	ENSMUSG00000097290.10	ENSMUST00000211443.2	767	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGTTGAAAGGTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	21613067	21627790	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_21613197_21614599_21614726_21625720_21625870_21627427
ENSMUST00000211499.2	chr16	+	1405	5	FSM	ENSMUSG00000109783.2	ENSMUST00000211499.2	1405	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATGTTTCACTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	23339093	23362782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_23339225_23340436_23340969_23346244_23346357_23353329_23353550_23362372
ENSMUST00000211626.2	chr7	-	726	6	FSM	ENSMUSG00000033916.6	ENSMUST00000211626.2	726	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATTTACCAAGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	12768666	12765945	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766718_12766749_12767755_12767970_12768561
ENSMUST00000211678.2	chr8	+	889	1	FSM	ENSMUSG00000109600.2	ENSMUST00000211678.2	889	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCAGAGAACCGCTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	83679140	83680029	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_83679100_83680000
ENSMUST00000211868.2	chr8	+	564	3	FSM	ENSMUSG00000051671.8	ENSMUST00000211868.2	564	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTATTTTCCTTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	127149266	127152084	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_127149290_127149371_127149570_127151741
ENSMUST00000211898.2	chr8	+	1078	4	FSM	ENSMUSG00000071078.7	ENSMUST00000211898.2	1078	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACACCCCATTTGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	70583982	70586398	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_70584250_70584567_70584659_70585236_70585305_70585746
ENSMUST00000212000.2	chr8	+	2081	8	FSM	ENSMUSG00000031728.11	ENSMUST00000212000.2	2081	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	110432719	110451564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_110433052_110434660_110434777_110436042_110436160_110444393_110444520_110447826_110447976_110448385_110448491_110449518_110449686_110450595
ENSMUST00000212188.2	chr8	+	1052	3	FSM	ENSMUSG00000110615.2	ENSMUST00000212188.2	1052	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTACGTAGTCACCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	124676158	124685674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_124676327_124679296_124679379_124684872
ENSMUST00000212221.2	chr9	+	2313	4	FSM	ENSMUSG00000025893.9	ENSMUST00000212221.2	2313	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACGATGGAAAAAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	4309834	4331711	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_4309935_4313701_4313807_4316826_4317072_4329848
ENSMUST00000212230.2	chr8	-	1407	10	NIC	ENSMUSG00000035770.9	novel	4627	13	NA	NA	2250	-54	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCTTCTTAGGGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	105167186	105147026	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_-_105147315_105148918_105149036_105149744_105149863_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105
ENSMUST00000212319.2	chr8	-	2111	12	FSM	ENSMUSG00000015027.12	ENSMUST00000212319.2	2111	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGGGTTGGTTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	123338143	123305127	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_123305937_123307789_123307908_123311650_123311773_123322504_123322609_123325258_123325399_123325777_123325906_123326011_123326079_123327213_123327358_123330116_123330220_123330877_123330953_123331878_123332003_123337966
ENSMUST00000212320.2	chr8	-	1121	9	FSM	ENSMUSG00000036120.11	ENSMUST00000212320.2	1121	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCAGGGTGCCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	70591746	70585915	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588185_70588282_70588859_70588941_70590678_70590874_70591570
ENSMUST00000212352.2	chr8	+	1234	3	FSM	ENSMUSG00000005699.17	ENSMUST00000212352.2	1234	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGATGTGGTCCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	106427818	106430122	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_106427950_106428805_106429029_106429242
ENSMUST00000212379.2	chr8	+	504	4	NIC	ENSMUSG00000008450.9	novel	948	5	NA	NA	31	-76	intron_retention	FALSE	canonical	NA	NA	NA	NA	2751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGATGTTTCTATTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	106587242	106605465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr8_+_106587338_106602165_106602291_106602985_106603241_106605436
ENSMUST00000212546.2	chr8	-	880	1	FSM	ENSMUSG00000110686.2	ENSMUST00000212546.2	880	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGTTTTTATATGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	106312832	106311952	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_106312000_106312800
ENSMUST00000212637.2	chr8	+	569	2	FSM	ENSMUSG00000048478.8	ENSMUST00000212637.2	569	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATCCTTTCCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	123939636	123948785	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123939977_123948556
ENSMUST00000212707.2	chr8	+	642	1	FSM	ENSMUSG00000110679.2	ENSMUST00000212707.2	642	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGCTTCAATAGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	94949620	94950262	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_94949600_94950300
ENSMUST00000212775.2	chr8	+	837	7	FSM	ENSMUSG00000031756.6	ENSMUST00000212775.2	837	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGCAATGTGCACACTA	NA	NA	NA	NA	NA	NA	NA	NA	117648485	117659852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117659530
ENSMUST00000212836.2	chr7	-	2716	19	FSM	ENSMUSG00000007783.11	ENSMUST00000212836.2	2716	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACTGTGCTTTTCTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	44624199	44608795	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624020
ENSMUST00000212964.2	chr8	+	2033	8	FSM	ENSMUSG00000031728.11	ENSMUST00000212964.2	2033	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	110432177	110451564	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_110432496_110432988_110433052_110436042_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
ENSMUST00000213005.2	chr8	+	1580	13	FSM	ENSMUSG00000033862.8	ENSMUST00000213005.2	1580	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACAGTTTGGCAATCC	NA	NA	NA	NA	NA	NA	NA	NA	123951604	123958989	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ENSMUST00000213153.2	chr10	-	968	4	FSM	ENSMUSG00000019853.7	ENSMUST00000213153.2	968	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTTGCCTCCGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	18421635	18416505	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_18417081_18420130_18420194_18420825_18420962_18421441
ENSMUST00000213200.2	chr11	+	1450	5	FSM	ENSMUSG00000071866.13	ENSMUST00000213200.2	1450	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGAACTGTTTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	6366311	6369804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_6367142_6368100_6368132_6368225_6368315_6369112_6369286_6369477
ENSMUST00000213388.2	chr9	+	2344	9	FSM	ENSMUSG00000032114.10	ENSMUST00000213388.2	2344	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGGCTCATCCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	44308395	44314265	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_44308744_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
ENSMUST00000213426.2	chr9	+	1111	1	FSM	ENSMUSG00000111472.2	ENSMUST00000213426.2	1111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATCCTTCAACAAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	104963118	104964229	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_104963100_104964200
ENSMUST00000213603.2	chr9	+	3430	21	FSM	ENSMUSG00000032178.15	ENSMUST00000213603.2	3430	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCCGCTGAATGTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	21284768	21316617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_21284879_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ENSMUST00000213752.2	chr9	+	898	7	NNC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	1344	-398	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCCTCTGAGAGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	106338567	106340772	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr9_+_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339683_106339877_106340329
ENSMUST00000213770.2	chr9	+	775	7	FSM	ENSMUSG00000035443.11	ENSMUST00000213770.2	775	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGTTGGAAGTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	26911005	26918626	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918453
ENSMUST00000213913.2	chr9	+	831	7	FSM	ENSMUSG00000004096.10	ENSMUST00000213913.2	831	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATCAATTTGACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	14411942	14421661	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_14412040_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ENSMUST00000214117.2	chr9	+	860	6	FSM	ENSMUSG00000039217.14	ENSMUST00000214117.2	860	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCATGTGTCCAGCCCAATT	NA	NA	NA	NA	NA	NA	NA	NA	50476673	50493137	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_50476827_50486567_50486649_50487993_50488006_50489060_50489193_50490586_50490721_50492789
ENSMUST00000214409.2	chr9	-	2384	13	FSM	ENSMUSG00000037949.9	ENSMUST00000214409.2	2384	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCTTCTCCAAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	122123412	122004957	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_122005545_122030836_122030954_122080212_122080342_122082001_122082194_122086121_122086305_122087982_122088058_122088600_122088657_122090149_122090546_122092735_122092856_122100264_122100400_122101432_122101631_122104576_122104730_122123369
ENSMUST00000214758.2	chr9	+	3177	21	FSM	ENSMUSG00000032178.15	ENSMUST00000214758.2	3177	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTGCCGTTCCGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	21288421	21316386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_21288510_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ENSMUST00000214864.2	chr9	-	1662	5	FSM	ENSMUSG00000032175.12	ENSMUST00000214864.2	1662	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTTACTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	21042539	21034754	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ENSMUST00000214962.2	chr9	+	846	4	FSM	ENSMUSG00000032060.11	ENSMUST00000214962.2	846	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAACCTGCCTCGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	50664292	50667930	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_50664385_50664485_50664778_50665811_50665935_50667591
ENSMUST00000215618.2	chr9	+	1313	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGACAGACTAAATAATGC	NA	NA	NA	NA	NA	NA	NA	NA	22137047	22150739	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ENSMUST00000215619.2	chr9	-	1423	2	FSM	ENSMUSG00000096472.3	ENSMUST00000215619.2	1423	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1006	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGACTTCAGATTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	21202604	21199705	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21200629_21202104
ENSMUST00000215985.2	chr10	-	913	2	FSM	ENSMUSG00000110847.2	ENSMUST00000215985.2	913	2	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	3629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGACTTACGGTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	91095206	91088006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_91088091_91094377
ENSMUST00000216063.2	chr9	-	6189	7	FSM	ENSMUSG00000047036.9	ENSMUST00000216063.2	6189	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAATTATACAGAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	122695071	122677974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_122683054_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690773_122691325_122694978
ENSMUST00000216138.2	chr9	-	799	4	FSM	ENSMUSG00000032532.8	ENSMUST00000216138.2	799	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTGTCCAGTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	121324705	121318889	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_121319268_121322434_121322598_121323382_121323599_121324663
ENSMUST00000216329.2	chr9	-	1559	3	FSM	ENSMUSG00000051705.14	ENSMUST00000216329.2	1559	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGGTGTGTGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	59657910	59643752	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_59645152_59657544_59657655_59657860
ENSMUST00000216594.2	chr9	+	1841	8	FSM	ENSMUSG00000032397.8	ENSMUST00000216594.2	1841	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAAAGTTGAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	64188884	64212706	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_64188935_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUST00000216755.2	chr9	+	836	4	FSM	ENSMUSG00000032060.11	ENSMUST00000216755.2	836	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTCGTGTTTGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	50664319	50667936	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_50664396_50664485_50664778_50665811_50665935_50667591
ENSMUST00000216867.2	chr9	+	577	4	FSM	ENSMUSG00000009927.10	ENSMUST00000216867.2	577	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGGGTGCATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	44318993	44321486	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250
ENSMUST00000216964.2	chr9	-	1215	9	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	53965	-41360	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGTAAGACTTCGATTC	NA	NA	NA	NA	NA	NA	NA	NA	58889512	58825894	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr9_-_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358
ENSMUST00000217175.2	chr10	+	2512	8	NNC	ENSMUSG00000035620.16	novel	3069	10	NA	NA	19716	-238	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGATTAAGGCTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84773256	84852073	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_84773316_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
ENSMUST00000217203.2	chr9	+	874	7	FSM	ENSMUSG00000111709.2	ENSMUST00000217203.2	874	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCTCCTCATAAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	78164410	78176448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_78164486_78165971_78166081_78168837_78168890_78169683_78169817_78173249_78173392_78175291_78175424_78176217
ENSMUST00000217340.2	chr10	-	365	2	Genic_Genomic	ENSMUSG00000069682.7	novel	635	1	NA	NA	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGGAAAAAAAAAATCAATAG	NA	NA	NA	NA	NA	NA	NA	NA	29575277	29574743	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	Genic_Genomic_chr10_-_29575071_29575239
ENSMUST00000217382.2	chr9	-	1696	3	FSM	ENSMUSG00000074476.7	ENSMUST00000217382.2	1696	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTGTCTGCATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	21671578	21667303	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_21668691_21668980_21669126_21671414
ENSMUST00000217463.2	chr9	+	1370	7	FSM	ENSMUSG00000060380.4	ENSMUST00000217463.2	1370	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTAGAATTTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	44379773	44393477	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_44379812_44379913_44380073_44381342_44381471_44382155_44382249_44384656_44384797_44388791_44388968_44392841
ENSMUST00000217472.2	chr9	+	2997	16	FSM	ENSMUSG00000032512.8	ENSMUST00000217472.2	2997	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTTAAAAAAAAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	119723960	119751024	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622
ENSMUST00000217537.2	chr10	-	2526	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATAGTTGATGGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	40133667	40123698	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
ENSMUST00000217641.2	chr9	-	3462	16	FSM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	31123083	31060852	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUST00000217777.2	chr10	-	455	5	FSM	ENSMUSG00000062981.6	ENSMUST00000217777.2	455	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAAAAATAAAAATACCC	NA	NA	NA	NA	NA	NA	NA	NA	95337789	95316695	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_95316840_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ENSMUST00000217908.2	chr10	+	1350	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTCATTTACTTACAGC	NA	NA	NA	NA	NA	NA	NA	NA	111309102	111331980	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ENSMUST00000217969.2	chr10	-	608	6	FSM	ENSMUSG00000090841.3	ENSMUST00000217969.2	608	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGGTTCTTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	128329726	128326731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328579_128329407_128329436_128329677
ENSMUST00000218107.2	chr10	-	584	6	FSM	ENSMUSG00000061983.8	ENSMUST00000218107.2	584	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	23663173	23661080	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891_23662943_23663053
ENSMUST00000218127.2	chr10	-	691	7	FSM	ENSMUSG00000090841.3	ENSMUST00000218127.2	691	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	128329726	128326729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128326903_128327588_128327634_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ENSMUST00000218184.2	chr10	+	1196	10	FSM	ENSMUSG00000055862.8	ENSMUST00000218184.2	1196	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGAGGAACAATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	80538259	80541207	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_80538794_80538882_80538964_80539042_80539115_80539563_80539591_80539686_80539763_80539872_80539921_80540013_80540029_80540251_80540270_80540532_80540548_80540897
ENSMUST00000218221.2	chr10	-	460	5	FSM	ENSMUSG00000061983.8	ENSMUST00000218221.2	460	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTCTCTTGTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	23663115	23661095	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23663053
ENSMUST00000218271.2	chr10	+	1606	10	FSM	ENSMUSG00000032763.12	ENSMUST00000218271.2	1606	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACATGGTAGTGTATATT	NA	NA	NA	NA	NA	NA	NA	NA	78410856	78417593	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78417247
ENSMUST00000218435.2	chr17	+	865	6	FSM	ENSMUSG00000023826.17	ENSMUST00000218435.2	865	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAAAGCCCTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	11286011	11854333	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_11286180_11456348_11456590_11522479_11522599_11653436_11653521_11711565_11711682_11854196
ENSMUST00000218893.2	chr10	-	661	6	FSM	ENSMUSG00000062981.6	ENSMUST00000218893.2	661	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCAAGTGTGTATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	95337802	95316669	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ENSMUST00000218964.2	chr10	+	979	5	NNC	ENSMUSG00000020307.16	novel	1078	6	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCTGAGAGAATCACCT	NA	NA	NA	NA	NA	NA	NA	NA	79518307	79524228	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523686
ENSMUST00000219026.2	chr10	+	1946	16	FSM	ENSMUSG00000040345.11	ENSMUST00000219026.2	1946	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATACATAGACTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	127159575	127165812	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_127159700_127160213_127160329_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
ENSMUST00000219037.2	chr10	+	1383	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTATTCAGTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	128158327	128163422	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ENSMUST00000219109.2	chr10	-	1844	11	FSM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCGTGTGTCTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	116786336	116742681	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
ENSMUST00000219236.2	chr10	-	692	7	FSM	ENSMUSG00000090841.3	ENSMUST00000219236.2	692	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGGTTCTTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	128329716	128326731	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_128326903_128327158_128327217_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ENSMUST00000219317.2	chr10	+	1109	9	FSM	ENSMUSG00000025351.15	ENSMUST00000219317.2	1109	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	128736857	128748691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_128737005_128744769_128744922_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ENSMUST00000219512.2	chr10	+	953	12	FSM	ENSMUSG00000078427.4	ENSMUST00000219512.2	953	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGTGTTTTATTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	128657765	128713493	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_128657841_128666819_128666854_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ENSMUST00000219555.2	chr12	+	2526	1	FSM	ENSMUSG00000059970.8	ENSMUST00000219555.2	2526	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGCTGTCTGGCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	76451182	76453708	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_76451200_76453700
ENSMUST00000219558.2	chr10	+	2411	1	FSM	ENSMUSG00000039910.11	ENSMUST00000219558.2	2411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2199	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAGAAATAAACTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	17598980	17601391	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_17599000_17601400
ENSMUST00000219943.2	chr10	+	519	2	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	3404	1870	3404	-1870	intron_retention	FALSE	canonical	NA	NA	NA	NA	895	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGGACCTGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	81015868	81016462	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr10_+_81015912_81015986
ENSMUST00000219961.2	chr10	+	1512	14	FSM	ENSMUSG00000058799.17	ENSMUST00000219961.2	1512	14	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAAGAAGGAGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	111309087	111331189	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111330911
ENSMUST00000220090.2	chr12	-	632	2	NNC	ENSMUSG00000044408.8	novel	1346	2	NA	NA	375	-572	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGGACGGGAGGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	54702983	54692748	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_54693321_54702923
ENSMUST00000220110.2	chr10	-	768	3	FSM	ENSMUSG00000078453.4	ENSMUST00000220110.2	768	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTCCTGGTGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	17898966	17887011	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_17887565_17894586_17894650_17898814
ENSMUST00000220238.2	chr12	+	2127	7	FSM	ENSMUSG00000021133.10	ENSMUST00000220238.2	2127	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCACTGGCTGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	80837283	80924647	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_80837590_80874799_80875018_80897987_80898051_80915200_80915399_80916848_80916985_80920922_80921351_80923869
ENSMUST00000220251.2	chr10	+	676	3	FSM	ENSMUSG00000112627.2	ENSMUST00000220251.2	676	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACTGTCTCTCTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	116786471	116795209	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_116786598_116791432_116791563_116794789
ENSMUST00000220279.2	chr10	-	1613	2	FSM	ENSMUSG00000045867.11	ENSMUST00000220279.2	1613	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTGCGTGTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	95158827	95010607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_95011841_95158447
ENSMUST00000220297.2	chr10	+	2268	12	FSM	ENSMUSG00000004931.12	ENSMUST00000220297.2	2268	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	81102793	81109070	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_+_81102968_81104007_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ENSMUST00000220576.2	chr13	+	1579	9	FSM	ENSMUSG00000054021.7	ENSMUST00000220576.2	1579	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAATTAGCGGAGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	43519139	43541135	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_43519217_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43540525
ENSMUST00000220733.2	chr13	-	2859	7	FSM	ENSMUSG00000074863.6	ENSMUST00000220733.2	2859	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTCCTGGGAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	62908514	62819597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_62821755_62823062_62823124_62823332_62823460_62853514_62853576_62853943_62854071_62886705_62886913_62908395
ENSMUST00000220756.2	chr12	-	887	1	FSM	ENSMUSG00000113976.2	ENSMUST00000220756.2	887	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCTCGGAATATCTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	72168569	72167682	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_72167700_72168600
ENSMUST00000220819.2	chr13	+	633	5	NNC	ENSMUSG00000042043.7	novel	559	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAATTTTCAGTTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	94925417	94979430	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_94925511_94951618_94951693_94968867_94968974_94973615_94973703_94979157
ENSMUST00000221062.2	chr12	+	1403	2	FSM	ENSMUSG00000113536.2	ENSMUST00000221062.2	1403	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTGTGAGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	17984691	17989629	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_17985255_17988789
ENSMUST00000221114.2	chr12	+	397	4	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	12	39252	12	-39252	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTATAATAAATGAACATGA	NA	NA	NA	NA	NA	NA	NA	NA	116369040	116376734	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680
ENSMUST00000221129.2	chr12	-	1425	13	FSM	ENSMUSG00000020566.20	ENSMUST00000221129.2	1425	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTTTTCTTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	17374731	17334725	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_17334950_17335113_17335247_17338083_17338182_17341429_17341524_17341628_17341722_17344145_17344215_17344676_17344776_17347729_17347822_17351121_17351217_17358272_17358359_17371598_17371667_17373338_17373512_17374630
ENSMUST00000221166.2	chr12	-	981	7	NNC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	65120736	65109197	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116720_65116827_65120588
ENSMUST00000221234.2	chr12	+	1819	5	FSM	ENSMUSG00000113302.2	ENSMUST00000221234.2	1819	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTTTCACGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	70569371	70591361	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_70569692_70582292_70582506_70587155_70587370_70588568_70588947_70590667
ENSMUST00000221380.2	chr13	-	1268	9	FSM	ENSMUSG00000003062.14	ENSMUST00000221380.2	1268	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	19579904	19541845	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_19542300_19543147_19543207_19551896_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ENSMUST00000221422.2	chr12	-	861	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221422.2	861	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGATTCTTTTATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	101942513	101934348	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_101934470_101935751_101935897_101941918
ENSMUST00000221459.2	chr12	+	2807	18	FSM	ENSMUSG00000007411.17	ENSMUST00000221459.2	2807	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	111541484	111622594	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ENSMUST00000221481.2	chr13	+	1548	9	FSM	ENSMUSG00000054021.7	ENSMUST00000221481.2	1548	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATCAATTAGCGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	43518971	43541132	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_43519021_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43540525
ENSMUST00000221612.2	chr13	-	596	4	FSM	ENSMUSG00000079092.5	ENSMUST00000221612.2	596	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGAAATATCATGTAATA	NA	NA	NA	NA	NA	NA	NA	NA	13179919	13170798	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_13170997_13171869_13172053_13176718_13176895_13179880
ENSMUST00000221747.2	chr13	-	2492	4	FSM	ENSMUSG00000113450.2	ENSMUST00000221747.2	2492	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGAAGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	62614646	62600829	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_62603008_62604500_62604562_62604746_62604874_62614520
ENSMUST00000221876.2	chr12	+	3676	23	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	38807	-2092	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATTTTTAAAAATATGCT	NA	NA	NA	NA	NA	NA	NA	NA	35135991	35195386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169731_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ENSMUST00000221996.2	chr13	-	2458	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221996.2	2458	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTCCTGGGAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	62832759	62819597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_62821755_62823062_62823124_62823332_62823460_62832646
ENSMUST00000222206.2	chr12	-	1400	3	FSM	ENSMUSG00000113670.2	ENSMUST00000222206.2	1400	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGAGTTTCCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	23010307	23003995	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_23004839_23008352_23008459_23009856
ENSMUST00000222222.2	chr12	+	724	9	FSM	ENSMUSG00000021033.12	ENSMUST00000222222.2	724	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCCAGATGCTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	87204381	87210639	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_87204435_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUST00000222276.2	chr12	+	1802	3	FSM	ENSMUSG00000017843.15	ENSMUST00000222276.2	1802	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTCTGTGCGTTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	110413553	110417433	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_110413820_110414405_110414472_110415963
ENSMUST00000222334.2	chr13	+	1724	1	FSM	ENSMUSG00000114114.2	ENSMUST00000222334.2	1724	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAACCTAGGATACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	17118430	17120154	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_17118400_17120200
ENSMUST00000222435.2	chr13	+	938	1	FSM	ENSMUSG00000062382.10	ENSMUST00000222435.2	938	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40588	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	74554527	74555465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_74554500_74555500
ENSMUST00000222485.2	chr13	+	3906	27	FSM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGTTGTTACCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	6598186	6630551	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUST00000222606.2	chr12	+	2284	12	NNC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCACCTCTTTGGCTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	84363903	84390494	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr12_+_84363949_84368585_84368766_84369657_84369794_84372376_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ENSMUST00000222695.2	chr12	+	2253	11	FSM	ENSMUSG00000021044.16	ENSMUST00000222695.2	2253	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACTGTTCCTTCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	88327417	88428490	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUST00000222759.2	chr13	-	1376	6	FSM	ENSMUSG00000021576.7	ENSMUST00000222759.2	1376	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTAGTTTTGGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	74465699	74451635	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_74452168_74453659_74453770_74457808_74457962_74459786_74459832_74464448_74464511_74465225
ENSMUST00000223035.2	chr13	+	1341	4	NNC	ENSMUSG00000021216.8	novel	1392	3	NA	NA	-6421	-109	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGATCTGGCTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	3968273	3983506	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_+_3968333_3978088_3978333_3980536_3980690_3982621
ENSMUST00000223041.2	chr6	+	1128	3	FSM	ENSMUSG00000059689.16	ENSMUST00000223041.2	1128	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGTATTTTTCATAATT	NA	NA	NA	NA	NA	NA	NA	NA	117818214	117822916	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_+_117818230_117820213_117820354_117821943
ENSMUST00000223211.2	chr12	+	794	8	FSM	ENSMUSG00000021286.9	ENST00000216602.10	1307	8	-13	526	-5	-495	multi-exon	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGGAACTGAACTCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	111780641	111794290	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792012_111792067_111793976_111794120_111794251
ENSMUST00000223220.2	chr12	-	2080	7	FSM	ENSMUSG00000004791.8	ENSMUST00000223220.2	2080	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGGATGTATGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	85224564	85213408	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr12_-_85214189_85216131_85216192_85216284_85216315_85218148_85218229_85218433_85218631_85222529_85222570_85223671
ENSMUST00000223237.2	chr6	-	1081	2	FSM	ENSMUSG00000048668.17	ENSMUST00000223237.2	1081	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGCAGCCTCGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	128336320	128334327	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr6_-_128335157_128336068
ENSMUST00000223254.2	chr13	-	385	5	FSM	ENSMUSG00000114053.2	ENSMUST00000223254.2	385	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAGTGTTAAAATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	5774441	5673385	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_5673414_5688843_5688951_5752478_5752592_5753416_5753510_5774397
ENSMUST00000223421.2	chr13	-	1582	13	NNC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	83	-2670	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAATGACTTTAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	9814909	9739567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr13_-_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745218_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814763
ENSMUST00000223704.2	chr18	-	2492	13	FSM	ENSMUSG00000024268.17	ENSMUST00000223704.2	2492	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAACAAGGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	25887040	25612134	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_25612769_25619850_25620023_25624197_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946_25638076_25670733_25670813_25812469_25812553_25886398
ENSMUST00000223831.2	chr13	-	2101	5	FSM	ENSMUSG00000021327.20	ENSMUST00000223831.2	2101	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGGTTCTTACTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	21586901	21571172	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21586841
ENSMUST00000223933.2	chr13	-	1155	1	FSM	ENSMUSG00000052957.9	ENSMUST00000223933.2	1155	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	550	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCGCCCCTGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	60324755	60323600	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_60323600_60324800
ENSMUST00000223981.3	chr14	-	3968	25	FSM	ENSMUSG00000021733.12	ENSMUST00000223981.3	3968	25	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTACATTAATTAAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	7766684	7673453	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_7673687_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7726974_7727350_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ENSMUST00000223987.2	chr17	+	1766	4	FSM	ENSMUSG00000037089.12	ENSMUST00000223987.2	1766	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTGGTTGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	45875130	45878597	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_45875185_45875505_45875700_45875850_45876006_45877234
ENSMUST00000224163.2	chr14	-	2315	11	FSM	ENSMUSG00000068758.9	ENSMUST00000224163.2	2315	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGAGCTACATAGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	8123171	8113751	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8120818_8120943_8121694_8121850_8122574
ENSMUST00000224169.2	chr14	+	857	8	NNC	ENSMUSG00000021809.11	novel	2494	9	NA	NA	31	-905	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTGACATAGGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	20344834	20360787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_20344861_20350654_20350748_20354020_20354161_20356299_20356435_20357300_20357433_20357760_20357868_20359739_20359866_20360689
ENSMUST00000224241.2	chr13	+	1665	7	FSM	ENSMUSG00000021420.14	ENSMUST00000224241.2	1665	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	36313882	36721567	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_36314017_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ENSMUST00000224263.2	chr14	+	4105	19	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	16972	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	19818304	19861855	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_+_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19856579_19856679_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ENSMUST00000224333.3	chr14	-	4097	25	FSM	ENSMUSG00000021733.12	ENSMUST00000224333.3	4097	25	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAATGACATGTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	7750938	7673188	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_7673687_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7726974_7727350_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7750872
ENSMUST00000224478.2	chr19	+	2194	14	FSM	ENSMUSG00000025217.16	ENSMUST00000224478.2	2194	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	45433946	45517732	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_45434127_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ENSMUST00000224568.2	chr14	+	714	6	FSM	ENSMUSG00000025290.18	ENSMUST00000224568.2	714	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTGAGAGGACAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	24540834	24545891	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_24541093_24541817_24541884_24541974_24542185_24543450_24543562_24545497_24545518_24545842
ENSMUST00000224611.2	chr13	+	1750	8	FSM	ENSMUSG00000021420.14	ENSMUST00000224611.2	1750	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCATTTGTCTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	36301857	36721571	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_+_36301989_36332343_36332428_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ENSMUST00000224711.2	chr17	+	2066	17	FSM	ENSMUSG00000024068.9	ENSMUST00000224711.2	2066	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCAAGGCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	74645981	74695481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ENSMUST00000224740.2	chr13	-	2354	13	FSM	ENSMUSG00000021363.15	ENSMUST00000224740.2	2354	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGTATTTGACCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	41223935	41179617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_41180039_41183492_41183613_41188229_41188362_41193104_41193254_41195494_41195662_41199494_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210134_41223612
ENSMUST00000225023.2	chr14	+	1613	5	FSM	ENSMUSG00000025290.18	ENSMUST00000225023.2	1613	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCTTGGGACTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	24540785	24547027	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545842
ENSMUST00000225476.2	chr19	-	1455	8	NNC	ENSMUSG00000024889.6	novel	1425	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGGAACCTTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	4675669	4672618	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674687_4674792_4675040_4675125_4675220_4675324_4675460
ENSMUST00000225585.2	chr16	+	1705	2	FSM	ENSMUSG00000079737.5	ENSMUST00000035426.7	1611	2	-91	-3	-91	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTACTTTGGTATCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	13489792	13496252	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_13489943_13494697
ENSMUST00000225791.2	chr14	+	3976	17	ISM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	19	5657	19	-5657	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATGTAGACCCGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	19801351	19856198	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910
ENSMUST00000225868.2	chr13	-	3081	15	FSM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTGAGGTGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	93328893	93282789	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ENSMUST00000226168.2	chr14	+	828	5	FSM	ENSMUSG00000022210.8	ENSMUST00000226168.2	828	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTAGTCTCTGGGTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	55716331	55725034	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549_55724621_55724716
ENSMUST00000226310.2	chr14	-	1809	11	NNC	ENSMUSG00000021902.8	novel	2084	11	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGGTCTCCTTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	30972974	30959652	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr14_-_30960111_30960293_30960440_30961076_30961194_30961587_30961695_30962230_30962391_30962815_30962967_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
ENSMUST00000226522.2	chr14	-	2804	5	FSM	ENSMUSG00000049295.18	ENSMUST00000226522.2	2804	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGCCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	52252039	52243533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52251962
ENSMUST00000226621.2	chr14	+	634	7	NIC	ENSMUSG00000037628.11	novel	917	8	NA	NA	40	33	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAGTTCTCCAGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	46998051	47008977	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr14_+_46998106_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
ENSMUST00000226782.2	chr14	-	949	4	FSM	ENSMUSG00000021917.17	ENSMUST00000226782.2	949	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACATTTGTTTTCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	30723566	30721782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_30722180_30722634_30722722_30722800_30722861_30723161
ENSMUST00000226812.2	chr15	-	2265	6	FSM	ENSMUSG00000115326.2	ENSMUST00000226812.2	2265	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGAAGATGTCCCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	37899960	37893238	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_37893329_37893486_37894139_37895034_37895417_37896953_37897999_37899430_37899443_37899876
ENSMUST00000226975.2	chr14	+	1462	13	FSM	ENSMUSG00000071547.5	ENST00000459839.5	1614	13	221	-69	221	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTCTCAGAGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	30853307	30861068	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_30853334_30856695_30856881_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ENSMUST00000226997.2	chr17	+	2131	13	NNC	ENSMUSG00000023800.16	novel	2371	13	NA	NA	155	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTAGGTGCTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	3532589	3569253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_3532672_3553273_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568386
ENSMUST00000227096.2	chr14	+	1848	14	FSM	ENSMUSG00000071547.5	ENSMUST00000227096.2	1848	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGCTTCATTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	30853009	30861081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ENSMUST00000227173.2	chr15	+	1122	8	FSM	ENSMUSG00000059586.11	ENSMUST00000227173.2	1122	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATCCTCAGCTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	59246133	59473521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59368625_59368704_59463545_59463647_59463986_59464094_59473188
ENSMUST00000227191.3	chr15	+	4230	15	FSM	ENSMUSG00000048424.19	ENSMUST00000227191.3	4230	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTACATCCTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	8997485	9067417	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_8998001_9029610_9029670_9030448_9030489_9030912_9030991_9031517_9031593_9035580_9035653_9037143_9037287_9041758_9041866_9043848_9043934_9055763_9055867_9057188_9057314_9058727_9058849_9060828_9060972_9063023_9063214_9065043
ENSMUST00000227257.2	chr14	-	622	3	FSM	ENSMUSG00000022193.8	ENSMUST00000227257.2	622	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGGAGTCCACAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	54855465	54851577	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_54851939_54854232_54854279_54855250
ENSMUST00000227583.2	chr14	-	781	3	ISM	ENSMUSG00000015759.12	ENST00000553660.5	759	4	8014	-79	8014	79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTCACTTATCACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	47017719	47013519	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr14_-_47014007_47016345_47016490_47017569
ENSMUST00000227640.2	chr14	-	1632	5	FSM	ENSMUSG00000022120.5	ENSMUST00000227640.2	1632	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAGCTGATTATTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	104760081	104739821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_104740872_104743528_104743778_104745374_104745467_104747737_104747874_104759976
ENSMUST00000227691.2	chr15	+	1945	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAACTGATTTTCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	44482570	44504911	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ENSMUST00000227729.2	chr17	+	656	5	FSM	ENSMUSG00000045257.11	ENSMUST00000227729.2	656	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTGAATTATGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	80597631	80604905	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_80597767_80599753_80599808_80601898_80602006_80602941_80603079_80604682
ENSMUST00000227794.2	chr14	+	1858	13	FSM	ENSMUSG00000071547.5	ENSMUST00000227794.2	1858	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGCTTCATTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	30856361	30861081	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ENSMUST00000227806.2	chr2	-	944	3	FSM	ENSMUSG00000115423.3	ENSMUST00000227806.2	944	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGCTGCCTTCACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	136733309	136723190	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_136723560_136727392_136727621_136732962
ENSMUST00000227997.2	chr16	+	1383	4	FSM	ENSMUSG00000091243.3	ENSMUST00000227997.2	1383	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTTCCGAGGGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	65612514	65658165	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_65612645_65624944_65625063_65636094_65636620_65657555
ENSMUST00000228055.2	chr14	-	705	2	FSM	ENSMUSG00000052584.11	ENSMUST00000228055.2	705	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCATGTGCGAGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	76794142	76770253	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_76770687_76793870
ENSMUST00000228057.2	chr15	-	3026	7	FSM	ENSMUSG00000022340.16	ENSMUST00000228057.2	3026	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTGTCTCCTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	44612068	44535254	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_44537045_44538761_44538912_44540930_44541135_44546743_44546847_44582183_44582382_44609641_44609859_44611704
ENSMUST00000228117.2	chr14	+	1466	4	FSM	ENSMUSG00000115483.2	ENSMUST00000228117.2	1466	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAATTTAAAAGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	43156328	43163461	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_+_43156357_43157302_43157435_43158114_43158297_43162337
ENSMUST00000228580.2	chr14	-	2812	4	FSM	ENSMUSG00000049295.18	ENSMUST00000228580.2	2812	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	52258158	52243538	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52257979
ENSMUST00000228736.2	chr14	-	702	4	FSM	ENSMUSG00000021917.17	ENSMUST00000228736.2	702	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACATTTGTTTTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30723320	30721783	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_30722180_30722634_30722722_30722800_30722861_30723161
ENSMUST00000228748.2	chr14	-	1691	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	NA	NA	NA	NA	NA	NA	NA	NA	52341464	52311908	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUST00000228767.2	chr14	-	1008	4	FSM	ENSMUSG00000021917.17	ENSMUST00000228767.2	1008	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACATTTGTTTTCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	30723629	30721782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_30722180_30722634_30722718_30722800_30722861_30723161
ENSMUST00000229019.2	chr15	-	941	10	FSM	ENSMUSG00000115987.2	ENSMUST00000229019.2	941	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	NA	NA	NA	NA	NA	NA	NA	NA	76510206	76506308	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508919_76509333_76509406_76510188
ENSMUST00000229085.2	chr15	-	1270	11	NNC	ENSMUSG00000022570.8	novel	1355	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAAGCTGGGCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75801627	75796524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800362_75800740_75800899_75801567
ENSMUST00000229101.2	chr16	+	1358	11	FSM	ENSMUSG00000055447.20	ENSMUST00000229101.2	1358	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGAATCCCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	49675995	49731444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_49676196_49688127_49688476_49689380_49689444_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49731231
ENSMUST00000229104.2	chr16	+	1179	10	FSM	ENSMUSG00000055447.20	ENSMUST00000229104.2	1179	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATTTTTCTATTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	49687195	49731454	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_49687271_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728446_49731236
ENSMUST00000229633.2	chr15	-	683	3	NIC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	22534	-890	intron_retention	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAACCAAGAAGCTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	76338943	76338078	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr15_-_76338559_76338651_76338785_76338873
ENSMUST00000229641.2	chr15	-	1355	11	FSM	ENSMUSG00000022570.8	ENSMUST00000229641.2	1355	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAAGCTGGGCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75801681	75796524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
ENSMUST00000229648.2	chr15	+	1222	9	FSM	ENSMUSG00000037353.10	ENSMUST00000229648.2	1222	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTTTATTGTGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	100366987	100375956	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_100367020_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ENSMUST00000229739.2	chr15	+	1311	2	FSM	ENSMUSG00000071711.13	ENSMUST00000229739.2	1311	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAACATTTGTGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	78294181	78298206	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_78294865_78297578
ENSMUST00000229802.2	chr15	+	1215	14	FSM	ENSMUSG00000056851.15	ENSMUST00000229802.2	1215	14	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAATTTTCAGTTTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	102379199	102407055	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUST00000229951.2	chr15	-	1405	11	FSM	ENSMUSG00000022570.8	ENSMUST00000229951.2	1405	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAAGCTGGGCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75801575	75796524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798138_75798307_75798591_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801501
ENSMUST00000230062.2	chr15	+	651	5	FSM	ENSMUSG00000022400.10	ENSMUST00000230062.2	651	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACGAGGAACCTGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	81350841	81359587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_81350956_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ENSMUST00000230118.2	chr15	-	544	2	FSM	ENSMUSG00000115976.2	ENSMUST00000230118.2	544	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTACCGTTGTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	80890611	80889607	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_80889892_80890351
ENSMUST00000230219.2	chr15	+	555	3	FSM	ENSMUSG00000022400.10	ENSMUST00000230219.2	555	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGACCATTTAAGGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	81350544	81355521	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_81350652_81352355_81352435_81355152
ENSMUST00000230281.2	chr16	+	1271	10	FSM	ENSMUSG00000055447.20	ENSMUST00000230281.2	1271	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGAATCCCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	49676018	49731444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728446_49731236
ENSMUST00000230288.2	chr15	-	1786	14	FSM	ENSMUSG00000023044.3	ENSMUST00000230288.2	1786	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	102097410	102085753	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_102086222_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321
ENSMUST00000230411.2	chr15	+	1900	9	FSM	ENSMUSG00000016619.11	ENSMUST00000230411.2	1900	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTTCTCCCTTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	84807649	84824208	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_84807852_84808969_84809098_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ENSMUST00000230495.2	chr16	-	1147	3	NIC	ENSMUSG00000022677.16	novel	1465	5	NA	NA	3	-4	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGCTTATGGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	14135208	14117111	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr16_-_14118074_14122317_14122452_14135157
ENSMUST00000230645.2	chr15	-	660	3	NNC	ENSMUSG00000022420.17	novel	1472	4	NA	NA	9502	70	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCATCCCAGCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	79649082	79646267	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr15_-_79646778_79647710_79647795_79649016
ENSMUST00000230736.2	chr15	-	1319	11	FSM	ENSMUSG00000022570.8	ENSMUST00000230736.2	1319	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAAGCTGGGCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75801627	75796524	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798138_75798291_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
ENSMUST00000230778.2	chr15	+	2818	9	FSM	ENSMUSG00000022307.17	ENSMUST00000230778.2	2818	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCTAGTTTCATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	41652776	41690425	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_41652903_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285
ENSMUST00000230836.2	chr16	+	1150	8	FSM	ENSMUSG00000055447.20	ENSMUST00000230836.2	1150	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGAATCCCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	49676007	49731444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_49676196_49688127_49688476_49704527_49704618_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
ENSMUST00000230844.2	chr15	-	760	7	FSM	ENSMUSG00000016637.8	ENSMUST00000230844.2	760	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGGCTTCTGTTCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	78057673	78043662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_78043909_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051330_78052112_78052193_78057587
ENSMUST00000230882.2	chr15	+	3263	9	FSM	ENSMUSG00000072501.6	ENSMUST00000230882.2	3263	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGCTCTAATTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	66449408	66483465	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374
ENSMUST00000231106.2	chr15	+	2459	1	FSM	ENSMUSG00000116508.2	ENSMUST00000231106.2	2459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCACCTGAGACTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	83056550	83059009	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_83056600_83059000
ENSMUST00000231141.2	chr15	+	1541	9	FSM	ENSMUSG00000046434.17	ENSMUST00000231141.2	1541	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	103148920	103153382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152385_103152456_103152682
ENSMUST00000231152.2	chr15	-	1271	2	FSM	ENSMUSG00000053929.18	ENSMUST00000231152.2	1271	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTTGTTTATTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	76543956	76542332	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_-_76543066_76543418
ENSMUST00000231280.2	chr16	+	1692	6	FSM	ENSMUSG00000039903.19	ENSMUST00000231280.2	1692	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTAAGTTCACTCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	90627875	90701773	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_90628321_90672926_90673080_90687417_90687562_90691465_90691544_90694251_90694342_90700991
ENSMUST00000231341.2	chr17	-	1970	5	FSM	ENSMUSG00000014769.11	ENSMUST00000231341.2	1970	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	15718601	15696220	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
ENSMUST00000231351.2	chr16	-	640	5	FSM	ENSMUSG00000003955.9	ENSMUST00000231351.2	640	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTCTTTGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	35891739	35864215	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655_35872779_35891686
ENSMUST00000231355.2	chr17	+	2194	4	FSM	ENSMUSG00000116802.2	ENSMUST00000231355.2	2194	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTATGAATGTAATTAATG	NA	NA	NA	NA	NA	NA	NA	NA	17455133	17486325	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_17455288_17482739_17482867_17483108_17483170_17484473
ENSMUST00000231380.2	chr16	-	1852	11	FSM	ENSMUSG00000022962.16	ENSMUST00000231380.2	1852	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTGATTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	91443813	91430292	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ENSMUST00000231392.2	chr16	+	678	5	FSM	ENSMUSG00000021018.9	ENSMUST00000231392.2	678	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTTCTCCATTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	20536855	20541014	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_20536917_20537573_20537658_20537740_20537835_20539268_20539353_20540659
ENSMUST00000231468.2	chr16	+	392	3	FSM	ENSMUSG00000075229.12	ENSMUST00000231468.2	392	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTACATATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	35892453	35912481	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_35892508_35910270_35910331_35912203
ENSMUST00000231564.2	chr16	-	902	3	FSM	ENSMUSG00000075330.5	ENSMUST00000231564.2	902	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGAAGTTTCATGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	19703024	19695434	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_19695861_19702442_19702568_19702673
ENSMUST00000231609.2	chr16	+	3999	13	FSM	ENSMUSG00000022833.8	ENSMUST00000231609.2	3999	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTACTTATTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	34511101	34545572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ENSMUST00000231643.2	chr16	-	650	3	FSM	ENSMUSG00000038965.18	ENSMUST00000231643.2	650	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATTTACTCAAAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	17019334	16971719	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_16972147_16977853_16978041_17019298
ENSMUST00000231737.2	chr16	+	969	1	FSM	ENSMUSG00000116875.2	ENSMUST00000231737.2	969	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	480	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGCGTGCTCGCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	24348143	24349112	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_24348100_24349100
ENSMUST00000231866.2	chr17	+	584	5	FSM	ENSMUSG00000046711.17	ENSMUST00000231866.2	584	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGGATTCGGCTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	27775605	27781613	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_27775686_27778506_27778678_27779901_27779986_27780438_27780486_27781411
ENSMUST00000232075.2	chr16	-	2645	8	FSM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTTACTGTGCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	22676417	22631969	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
ENSMUST00000232262.2	chr16	+	2130	11	FSM	ENSMUSG00000022817.16	ENSMUST00000232262.2	2130	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGATTACTGGTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	33712310	33769523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_+_33712420_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768252_33769026
ENSMUST00000232321.2	chr16	-	818	6	FSM	ENSMUSG00000023791.19	ENSMUST00000232321.2	818	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTTTGTCTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	31918558	31903233	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918472
ENSMUST00000232499.2	chr17	-	640	6	FSM	ENSMUSG00000092074.3	ENSMUST00000232499.2	640	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGTATTTTATGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	6367693	6356621	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_6356874_6358912_6359012_6361567_6361646_6361983_6362108_6365191_6365234_6367648
ENSMUST00000232523.2	chr16	+	1972	11	ISM	ENSMUSG00000022779.17	ENSMUST00000023465.16	3073	18	13431	0	13431	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	NA	NA	NA	NA	NA	NA	NA	16702075	16710854	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr16_+_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ENSMUST00000232687.2	chr17	-	694	4	FSM	ENSMUSG00000024067.15	ENSMUST00000232687.2	694	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATAGTTGTTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	74623198	74606476	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038
ENSMUST00000232732.2	chr17	+	748	4	FSM	ENSMUSG00000002768.9	ENSMUST00000232732.2	748	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCCAGCCCACCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	46991383	46993963	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_46991429_46992542_46992824_46992934_46993038_46993644
ENSMUST00000232766.2	chr17	-	883	4	FSM	ENSMUSG00000024048.16	ENSMUST00000232766.2	883	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTAGCGTTATTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	71305049	71301281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71305025
ENSMUST00000232836.2	chr17	-	2778	13	FSM	ENSMUSG00000024006.18	ENSMUST00000232836.2	2778	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACAGCCTCCTTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	29219665	29190691	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982
ENSMUST00000232840.2	chr17	-	1756	2	FSM	ENSMUSG00000117234.2	ENSMUST00000232840.2	1756	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGTCCACTGGAAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	22288869	22286244	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_22287883_22288751
ENSMUST00000233026.2	chr17	-	355	1	FSM	ENSMUSG00000117187.2	ENSMUST00000233026.2	355	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGCCTAGGCCTACCCC	NA	NA	NA	NA	NA	NA	NA	NA	74745634	74745279	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_74745300_74745600
ENSMUST00000233089.2	chr17	-	947	4	FSM	ENSMUSG00000024048.16	ENSMUST00000233089.2	947	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTAGCGTTATTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	71304302	71301281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71304214
ENSMUST00000233136.2	chr17	-	1289	7	FSM	ENSMUSG00000023971.10	ENSMUST00000233136.2	1289	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTAAAAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	46985278	46978386	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ENSMUST00000233174.2	chr17	-	1263	8	FSM	ENSMUSG00000023980.8	ENSMUST00000233174.2	1263	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTTATTTATTATTATA	NA	NA	NA	NA	NA	NA	NA	NA	47813212	47794288	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_47794760_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ENSMUST00000233185.2	chr17	+	1247	3	FSM	ENSMUSG00000117007.2	ENSMUST00000233185.2	1247	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCAGACTGGTAAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	29272309	29278729	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_29272589_29275356_29275414_29277818
ENSMUST00000233296.2	chr17	+	2080	3	FSM	ENSMUSG00000023067.15	ENSMUST00000233296.2	2080	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGTCATTAGAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	29312754	29319701	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_29313016_29317376_29317812_29318317
ENSMUST00000233427.2	chr17	+	729	6	FSM	ENSMUSG00000037805.16	ENSMUST00000233427.2	729	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	28547541	28550006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_28547593_28547787_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
ENSMUST00000233454.2	chr17	-	1560	3	FSM	ENSMUSG00000079414.4	ENSMUST00000233454.2	1560	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATAAAATTATAT	NA	NA	NA	NA	NA	NA	NA	NA	57412922	57398369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_57399770_57410349_57410485_57412897
ENSMUST00000233491.2	chr17	+	673	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233491.2	673	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGCTGCCTTACCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	46991928	46993802	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_46992060_46992542_46992824_46992934_46993038_46993644
ENSMUST00000233519.2	chr17	-	414	4	NNC	ENSMUSG00000055839.7	novel	537	4	NA	NA	22	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGACTTTTCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	24048088	24043782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_24043954_24046441_24046548_24047817_24047923_24048056
ENSMUST00000233563.2	chr9	+	514	4	FSM	ENSMUSG00000074415.15	ENSMUST00000233563.2	514	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGTGACATGTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	41386355	41501463	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_41386450_41389629_41389778_41439418_41439497_41501269
ENSMUST00000233580.2	chr17	-	1850	6	FSM	ENSMUSG00000024098.7	ENSMUST00000233580.2	1850	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAACATGTGAGTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	66258110	66228966	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_66230034_66233251_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
ENSMUST00000233611.2	chr17	+	1746	16	FSM	ENSMUSG00000024068.9	ENSMUST00000233611.2	1746	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATGGATGCCTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	74646031	74695307	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ENSMUST00000233798.2	chr17	-	906	4	FSM	ENSMUSG00000024048.16	ENSMUST00000233798.2	906	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTAGCGTTATTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	71305558	71301281	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71305511
ENSMUST00000233832.2	chr17	+	493	4	FSM	ENSMUSG00000002379.8	ENSMUST00000233832.2	493	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAAAGGCAGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	57024782	57029141	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_57024943_57028034_57028128_57028358_57028442_57028984
ENSMUST00000233833.2	chr9	+	1721	4	FSM	ENSMUSG00000074415.15	ENSMUST00000233833.2	1721	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATTTGTCAGTTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	41386163	41453473	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_41386450_41399489_41399565_41439418_41439497_41452191
ENSMUST00000233974.2	chr17	-	2313	16	FSM	ENSMUSG00000003546.11	ENSMUST00000233974.2	2313	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCGGAGTCTTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	46956948	46941549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956900
ENSMUST00000234095.2	chr17	-	2403	8	FSM	ENSMUSG00000024097.12	ENSMUST00000234095.2	2403	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAAGTTTGTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	80514286	80507553	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80513995
ENSMUST00000234107.2	chr18	+	2422	8	FSM	ENSMUSG00000024317.16	ENSMUST00000234107.2	2422	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTGTAAAAAACCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21134397	21160592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ENSMUST00000234207.2	chr18	+	439	4	FSM	ENSMUSG00000002477.6	ENSMUST00000234207.2	439	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAAGTGTAGGGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	10617795	10627955	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_10617927_10623630_10623708_10626948_10627018_10627793
ENSMUST00000234235.2	chr17	-	682	3	FSM	ENSMUSG00000040888.11	ENSMUST00000234235.2	682	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTGATTTCTGGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	24915064	24913158	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_24913417_24914227_24914392_24914804
ENSMUST00000234262.2	chr17	-	2774	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234262.2	2774	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGATGTCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	26463142	26431664	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462979
ENSMUST00000234304.2	chr17	+	1137	7	FSM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTAGCTCTTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	24645614	24658294	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_24645717_24645826_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ENSMUST00000234344.2	chr18	+	2416	6	FSM	ENSMUSG00000024400.17	ENSMUST00000234344.2	2416	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGCACTGTTAGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	31937228	31968475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635
ENSMUST00000234406.2	chr17	-	842	5	FSM	ENSMUSG00000036438.15	ENSMUST00000234406.2	842	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGTGGACTGTGGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	87754284	87741092	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87754220
ENSMUST00000234424.2	chr17	+	745	7	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	32547	1239	32547	-1239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTCCCACACTTCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	71955756	71964787	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_+_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ENSMUST00000234496.2	chr18	+	1886	13	FSM	ENSMUSG00000024381.17	ENSMUST00000234496.2	1886	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAACGAGGCGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	32510297	32568786	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32565035_32565147_32565376_32565479_32568187
ENSMUST00000234507.2	chr17	-	1653	12	FSM	ENSMUSG00000024012.19	ENSMUST00000234507.2	1653	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	29566267	29551049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566094
ENSMUST00000234536.2	chr18	+	2271	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTGTAAAAAACCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21134964	21160592	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ENSMUST00000234579.2	chr17	-	1445	7	NNC	ENSMUSG00000039183.7	novel	1427	7	NA	NA	-6	1	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAAGGTGTCTGTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	25105313	25101584	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104838_25105252
ENSMUST00000234597.2	chr17	-	1434	6	FSM	ENSMUSG00000039183.7	ENSMUST00000234597.2	1434	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAAGGTGTCTGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	25104888	25101585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692
ENSMUST00000234687.2	chr17	-	2833	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234687.2	2833	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCGTGAGCCTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	26463188	26431683	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462963
ENSMUST00000234696.2	chr17	-	987	7	FSM	ENSMUSG00000024097.12	ENSMUST00000234696.2	987	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	80514732	80508738	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_80509032_80510119_80510174_80511583_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUST00000234871.2	chr18	-	2818	14	FSM	ENSMUSG00000044252.19	ENSMUST00000234871.2	2818	14	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	12996497	12888384	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996128
ENSMUST00000234886.2	chr17	-	863	3	ISM	ENSMUSG00000036820.13	ENSMUST00000129523.3	1526	12	5629	0	5302	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	24377009	24374806	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_24375060_24375544_24375647_24376501
ENSMUST00000234902.2	chr17	+	2289	4	NNC	ENSMUSG00000044477.13	novel	3039	6	NA	NA	131126	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGATTGTCTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	30355163	30428994	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_+_30355216_30372276_30372343_30411536_30411705_30426991
ENSMUST00000234928.2	chr17	-	1471	6	FSM	ENSMUSG00000039183.7	ENSMUST00000234928.2	1471	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAAGGTGTCTGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	25104925	25101585	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692
ENSMUST00000234977.2	chr17	+	1769	8	NIC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGTTTTACTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	24633624	24644875	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr17_+_24633709_24634014_24634137_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUST00000235050.2	chr17	+	773	6	FSM	ENSMUSG00000052712.18	ENSMUST00000235050.2	773	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGGTTGCTTAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	29487926	29520503	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_29487977_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUST00000235069.2	chr17	-	1040	8	FSM	ENSMUSG00000024097.12	ENSMUST00000235069.2	1040	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGATGTTTTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80514732	80508745	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUST00000235088.2	chr17	-	1660	12	FSM	ENSMUSG00000024012.19	ENSMUST00000235088.2	1660	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	29566325	29551049	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566094
ENSMUST00000235112.2	chr17	-	2657	23	FSM	ENSMUSG00000005371.16	ENSMUST00000235112.2	2657	23	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGACTGTACTGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	88372671	88299388	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321976_88322826_88322909_88323015_88323141_88372645
ENSMUST00000235263.2	chr19	-	1400	7	FSM	ENSMUSG00000025092.8	ENSMUST00000235263.2	1400	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTCTGTCAGGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	58849399	58808150	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_58808810_58809431_58809549_58810495_58810601_58813682_58813870_58815987_58816113_58816684_58816771_58849278
ENSMUST00000235289.2	chr19	+	1563	3	FSM	ENSMUSG00000087132.9	ENSMUST00000235289.2	1563	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAAGTGTTTGCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	4489350	4499001	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4489418_4493769_4493817_4497552
ENSMUST00000235306.2	chr19	+	645	3	FSM	ENSMUSG00000024854.5	ENSMUST00000235306.2	645	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCTGACCTTACATCTC	NA	NA	NA	NA	NA	NA	NA	NA	4282491	4283685	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_4282607_4282801_4282914_4283267
ENSMUST00000235307.2	chr18	+	1747	1	FSM	ENSMUSG00000059040.6	ENSMUST00000235307.2	1747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24429	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	48179713	48181460	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_48179700_48181500
ENSMUST00000235455.2	chr18	+	1905	4	FSM	ENSMUSG00000057561.11	ENSMUST00000235455.2	1905	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCTTTTTAATATGTT	NA	NA	NA	NA	NA	NA	NA	NA	46730821	46742245	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_46730868_46731707_46731768_46732343_46732468_46740570
ENSMUST00000235511.2	chr19	+	2276	1	FSM	ENSMUSG00000118106.2	ENSMUST00000235511.2	2276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTATTAGATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	32463322	32465598	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_32463300_32465600
ENSMUST00000235599.2	chr19	-	2719	16	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	0	3	intron_retention	FALSE	canonical	NA	NA	NA	NA	1680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCCCAGCTCAGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	5821429	5808451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_-_5808725_5808827_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ENSMUST00000235603.2	chr18	+	785	6	FSM	ENSMUSG00000024608.12	ENSMUST00000235603.2	785	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTTGGTTCTGGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	60880742	60911615	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_60880848_60907581_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ENSMUST00000235619.2	chr18	-	1524	9	FSM	ENSMUSG00000024357.11	ENSMUST00000235619.2	1524	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTCTCTTGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	35631947	35399448	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481809_35571319_35571434_35631843
ENSMUST00000235620.2	chr19	+	2441	13	FSM	ENSMUSG00000015176.12	ENSMUST00000235620.2	2441	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTGTGATTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	46064427	46072900	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ENSMUST00000235622.2	chr18	+	549	3	FSM	ENSMUSG00000118365.2	ENSMUST00000235622.2	549	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGGCAGGAATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	52661732	52710397	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_52661819_52696727_52696947_52710153
ENSMUST00000235679.2	chr18	+	1190	4	FSM	ENSMUSG00000117869.2	ENSMUST00000235679.2	1190	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACTGTGTAGTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	35686423	35691369	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389
ENSMUST00000235680.2	chr19	-	1151	5	FSM	ENSMUSG00000041845.12	ENSMUST00000235680.2	1151	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGTCCTGACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	4489428	4475694	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4476285_4476607_4476790_4482082_4482193_4482795_4482884_4489247
ENSMUST00000235701.2	chr19	-	1905	12	FSM	ENSMUSG00000024926.11	ENSMUST00000235701.2	1905	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTATCAGGAGTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	5660076	5653044	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879
ENSMUST00000235745.2	chr18	-	575	6	NNC	ENSMUSG00000024645.6	novel	2418	6	NA	NA	859	-1347	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGAAGTGCAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	84968790	84965662	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_-_84965871_84965958_84966065_84966147_84966222_84967318_84967417_84967514_84967578_84968764
ENSMUST00000235799.2	chr18	+	1300	7	FSM	ENSMUSG00000024537.6	ENSMUST00000235799.2	1300	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGGTTTTATCTGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	67774670	67787232	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_67775049_67777378_67777551_67779062_67779122_67781197_67781317_67781842_67782017_67786222_67786344_67786955
ENSMUST00000235849.2	chr18	+	726	5	FSM	ENSMUSG00000057561.11	ENSMUST00000235849.2	726	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAAATCTCTCCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	46730776	46749523	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_46730868_46731707_46731768_46740570_46740810_46748859_46748995_46749322
ENSMUST00000235858.2	chr17	-	1528	7	FSM	ENSMUSG00000118341.2	ENSMUST00000235858.2	1528	7	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATATAATAAATAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	31142805	30678475	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_30678577_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_31142559
ENSMUST00000235900.2	chr19	+	1884	9	FSM	ENSMUSG00000024785.8	ENSMUST00000235900.2	1884	9	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATCTGGGATTTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	29078774	29121329	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120546
ENSMUST00000235920.2	chr19	-	655	1	FSM	ENSMUSG00000118181.2	ENSMUST00000235920.2	655	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATCTGTGGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	6807231	6806576	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6806600_6807200
ENSMUST00000235966.2	chr18	+	755	6	FSM	ENSMUSG00000024608.12	ENSMUST00000235966.2	755	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGTTCTGGTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	60880220	60911617	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_60880294_60907581_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ENSMUST00000236020.2	chr18	+	857	5	FSM	ENSMUSG00000037058.17	ENSMUST00000236020.2	857	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAATTAAATCACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	35731693	35749572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_35731813_35733097_35733171_35743923_35744088_35746375_35746556_35749251
ENSMUST00000236166.2	chr17	+	1047	5	FSM	ENSMUSG00000024181.10	ENSMUST00000236166.2	1047	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	26342473	26345587	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345265
ENSMUST00000236217.2	chr19	+	503	5	FSM	ENSMUSG00000038274.14	ENSMUST00000236217.2	503	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGTTTTCTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	6107998	6109549	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6108032_6108257_6108356_6108457_6108603_6109173_6109230_6109378
ENSMUST00000236268.2	chr17	-	2038	8	FSM	ENSMUSG00000036775.14	ENSMUST00000236268.2	2038	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTGATTCTACCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	26309249	26300203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26301236_26301849_26302068_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
ENSMUST00000236414.2	chr18	+	718	4	FSM	ENSMUSG00000037058.17	ENSMUST00000236414.2	718	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAATTAAATCACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	35733117	35749572	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_35733171_35743923_35744088_35746375_35746556_35749251
ENSMUST00000236507.2	chr18	+	1846	14	FSM	ENSMUSG00000037236.17	ENSMUST00000236507.2	1846	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTTAATGAAAATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	35695263	35723651	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_35695313_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUST00000236529.2	chr19	+	580	5	NNC	ENSMUSG00000024940.12	novel	1561	12	NA	NA	3163	-316	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGGGGCGGTATGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	5806821	5807804	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_+_5806960_5807062_5807204_5807338_5807501_5807582_5807656_5807738
ENSMUST00000236574.2	chr18	-	596	4	FSM	ENSMUSG00000024352.13	ENST00000507779.2	602	4	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTCCCATTTTTCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	35795175	35793109	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_35793398_35793496_35793628_35793844_35793911_35795064
ENSMUST00000236683.2	chr17	-	627	5	FSM	ENSMUSG00000057411.10	ENSMUST00000236683.2	627	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTGTTTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	26011361	26009479	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011304
ENSMUST00000236687.2	chr19	+	1178	8	FSM	ENSMUSG00000024875.6	ENSMUST00000236687.2	1178	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGACCCTGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	5138955	5142533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5139226_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
ENSMUST00000236740.2	chr17	-	1567	7	FSM	ENSMUSG00000061232.17	ENSMUST00000236740.2	1567	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCACTATGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	34219279	34214997	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34215478_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
ENSMUST00000236853.2	chr17	-	6226	17	FSM	ENSMUSG00000024039.16	ENSMUST00000236853.2	6226	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTTGTTTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	31856173	31827867	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ENSMUST00000236917.2	chr19	+	813	5	FSM	ENSMUSG00000024902.6	ENSMUST00000236917.2	813	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTCTCAGCTTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	5012375	5014972	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013718_5014701
ENSMUST00000236960.2	chr19	-	2148	9	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	-8652	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTGGTTGCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	45760325	45740268	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NIC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45753888_45754064_45755832_45756447_45758489_45758649_45760120
ENSMUST00000236978.2	chr19	-	2731	17	FSM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGCCAAGAGTAAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	5821447	5808378	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ENSMUST00000237018.2	chr18	+	1888	14	NNC	ENSMUSG00000037236.17	novel	1854	14	NA	NA	-2	23	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATCCGAGTGACAACAG	NA	NA	NA	NA	NA	NA	NA	NA	35695269	35723674	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712364_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUST00000237025.2	chr19	+	941	7	FSM	ENSMUSG00000024875.6	ENSMUST00000237025.2	941	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGACCCTGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	5138587	5142533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5142156_5142251_5142329
ENSMUST00000237037.2	chr17	-	2079	12	NNC	ENSMUSG00000062202.15	novel	2007	12	NA	NA	39	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	30795423	30439072	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr17_-_30439119_30439483_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
ENSMUST00000237061.2	chr18	+	1854	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237061.2	1854	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTACACATACGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	35695271	35723634	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUST00000237183.2	chr17	+	1743	6	FSM	ENSMUSG00000041199.4	ENSMUST00000237183.2	1743	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGACCATGAGCATATCT	NA	NA	NA	NA	NA	NA	NA	NA	25946643	25950438	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_25946822_25947225_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
ENSMUST00000237265.2	chr17	-	1993	9	FSM	ENSMUSG00000036775.14	ENSMUST00000237265.2	1993	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTGATTCTACCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	26309194	26300203	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_26301236_26301944_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
ENSMUST00000237275.2	chr18	+	2593	2	FSM	ENSMUSG00000117798.2	ENSMUST00000237275.2	2593	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGAAAACAATTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	67107235	67110236	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_67108076_67108483
ENSMUST00000237431.2	chr18	+	1326	9	FSM	ENSMUSG00000062328.9	ENSMUST00000237431.2	1326	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGACTGTCTAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	75131628	75136451	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_75131917_75132048_75132285_75133519_75133615_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
ENSMUST00000237529.2	chr19	-	1480	6	FSM	ENSMUSG00000025024.8	ENSMUST00000237529.2	1480	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTAGGATGTGCGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	53378472	53368310	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378293
ENSMUST00000237700.2	chr18	+	1684	8	FSM	ENSMUSG00000079614.5	ENSMUST00000237700.2	1684	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTTGTGAGACCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	67908044	67925663	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933
ENSMUST00000237738.2	chr19	-	1357	8	FSM	ENSMUSG00000024792.10	ENSMUST00000237738.2	1357	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGAAGCAGCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	6134986	6130791	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134079_6134381_6134492_6134824
ENSMUST00000237759.2	chr17	-	1133	8	FSM	ENSMUSG00000073422.12	ENSMUST00000237759.2	1133	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	34247028	34245006	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_-_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246975
ENSMUST00000237760.2	chr19	-	1197	4	FSM	ENSMUSG00000094936.9	ENSMUST00000237760.2	1197	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGGGTATGTGTGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	4843908	4835184	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4835596_4840184_4840339_4842425_4842849_4843699
ENSMUST00000237792.2	chr18	-	1024	3	FSM	ENSMUSG00000024346.7	ENSMUST00000237792.2	1024	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTTGCCTTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	36587577	36536728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_-_36537514_36584132_36584300_36587505
ENSMUST00000237840.2	chr19	+	472	4	FSM	ENSMUSG00000038274.14	ENSMUST00000237840.2	472	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTTATGTTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	6108252	6109546	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_6108356_6108457_6108603_6109173_6109230_6109378
ENSMUST00000237862.2	chr19	-	1619	10	FSM	ENSMUSG00000037916.15	ENSMUST00000237862.2	1619	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCTCTTTTTGTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	4062694	4057383	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062593
ENSMUST00000237870.2	chr18	+	992	2	FSM	ENSMUSG00000006850.9	ENSMUST00000237870.2	992	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTTGTTGTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	36868127	36869250	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr18_+_36868310_36868440
ENSMUST00000237888.2	chr19	-	2856	14	NNC	ENSMUSG00000024965.10	novel	2587	15	NA	NA	39	-13	intron_retention	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCCTCCTCTGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	6996798	6976338	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr19_-_6976889_6977006_6977149_6979124_6979821_6979947_6980045_6980189_6980315_6980398_6980449_6980536_6980672_6980835_6980944_6991215_6991319_6991427_6991597_6991695_6991816_6991984_6992219_6996033_6996208_6996645
ENSMUST00000237893.2	chr19	-	806	7	FSM	ENSMUSG00000060803.7	ENSMUST00000237893.2	806	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGAGGTGTCTTTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	4087977	4085410	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087865
ENSMUST00000238036.2	chr19	+	1291	9	FSM	ENSMUSG00000071655.13	ENSMUST00000238036.2	1291	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGGGGCTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	8848956	8853227	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ENSMUST00000238093.2	chr19	+	1018	7	FSM	ENSMUSG00000024875.6	ENSMUST00000238093.2	1018	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGACCCTGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	5138572	5142533	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142329
ENSMUST00000238199.2	chr10	-	3650	27	FSM	ENSMUSG00000020061.19	ENSMUST00000238199.2	3650	27	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATATAATAATT	NA	NA	NA	NA	NA	NA	NA	NA	88440887	88354200	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr10_-_88354432_88358828_88359016_88360830_88360968_88362143_88362304_88365286_88365427_88367530_88367727_88369346_88369436_88372176_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477_88391603_88394432_88394566_88396085_88396253_88402369_88402427_88404459_88404512_88406400_88406519_88407381_88407531_88409277_88409392_88421521_88421558_88440762
ENSMUST00000238267.2	chr2	+	1071	7	FSM	ENSMUSG00000027523.21	ENSMUST00000238267.2	1071	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	174186109	174188537	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_174186170_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUST00000238271.2	chr17	-	403	4	ISM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	0	2214	0	-1961	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTCCGTGTGTTTGATA	NA	NA	NA	NA	NA	NA	NA	NA	87754363	87743053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	ISM_chr17_-_87743139_87743218_87743363_87750123_87750155_87754220
ENSMUST00000238277.2	chr2	+	572	5	FSM	ENSMUSG00000074578.15	ENSMUST00000238277.2	572	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	166905140	166907782	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907232_166907401_166907606
ENSMUST00000238346.2	chr2	-	457	2	FSM	ENSMUSG00000026872.19	ENST00000475115.3	535	2	62	16	0	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACAATTTGCTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	45007407	45006452	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_45006714_45007211
ENSMUST00000238678.2	chr2	-	1597	1	FSM	ENSMUSG00000074629.4	ENSMUST00000238678.2	1597	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	156700132	156698535	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_156698500_156700100
ENSMUST00000238792.2	chr7	-	1503	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATTTTTTCCTAGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	89629910	89604144	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUST00000238818.2	chr15	+	3378	25	FSM	ENSMUSG00000036561.10	ENSMUST00000238818.2	3378	25	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCAGTGGAACCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	89095803	89170467	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr15_+_89095983_89126362_89126492_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163475_89163557_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
ENSMUST00000238821.2	chr6	-	2439	9	NNC	ENSMUSG00000034312.16	novel	8036	14	NA	NA	-17660	-7960	intron_retention	FALSE	canonical	NA	NA	NA	NA	923	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGGTGTTGGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	90758954	90647390	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	NNC_chr6_-_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90758802
ENSMUST00000238825.2	chr11	+	2997	8	FSM	ENSMUSG00000020610.18	ENSMUST00000238825.2	2997	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCATTTCGCGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	109317045	109328974	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ENSMUST00000238842.2	chr8	-	2520	8	FSM	ENSMUSG00000062991.10	ENSMUST00000238842.2	2520	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACAATTTATTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	32408596	32307988	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_-_32308711_32311269_32311477_32312254_32312386_32314471_32314599_32316280_32316384_32328288_32328357_32339337_32339468_32407564
ENSMUST00000238986.2	chr17	+	849	6	FSM	ENSMUSG00000045744.12	ENSMUST00000238986.2	849	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGGTAATTTCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	24692874	24694443	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr17_+_24692962_24693092_24693213_24693378_24693535_24693612_24693715_24693963_24694118_24694213
ENSMUST00000239030.2	chr4	+	2160	9	FSM	ENSMUSG00000028710.19	ENSMUST00000239030.2	2160	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCCACACCCCCACACAC	NA	NA	NA	NA	NA	NA	NA	NA	115642180	115669511	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
ENSMUST00000239075.2	chr2	+	1163	9	FSM	ENSMUSG00000026921.21	ENSMUST00000239075.2	1163	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTGTCAATGGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	26476641	26482693	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482293_26482429
ENSMUST00000239081.2	chr7	+	1512	4	FSM	ENSMUSG00000042978.12	ENST00000671413.3	1512	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTGCAGCGCAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	125848033	125891821	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr7_+_125848285_125889028_125889262_125890214_125890418_125890996
ENSMUST00000239099.2	chr14	-	880	5	FSM	ENSMUSG00000021951.8	ENSMUST00000239099.2	880	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTCATGAGGTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	57809069	57787053	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378_57803542_57808999
ENSMUST00000239113.2	chrX	-	3015	7	FSM	ENSMUSG00000031266.8	ENSMUST00000239113.2	3015	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAATTTCAAATA	NA	NA	NA	NA	NA	NA	NA	NA	133501754	133488934	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
ENSMUST00000239199.2	chr2	-	1105	2	FSM	ENSMUSG00000074813.15	ENSMUST00000239199.2	1105	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGTTTCTTAGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	128271791	128214020	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_128214348_128271013
ENSMUST00000239221.2	chr2	-	1999	3	FSM	ENSMUSG00000074813.15	ENSMUST00000239221.2	1999	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGACAGTTTTTCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	128271311	128158096	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_128159593_128172764_128172970_128271013
ENSMUST00000239240.2	chr19	+	1988	11	FSM	ENSMUSG00000024776.19	ENSMUST00000239240.2	1988	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCGGTTGTCACATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	34169628	34217733	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr19_+_34169996_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
ENSMUST00000239275.2	chr2	-	1797	3	FSM	ENSMUSG00000074813.15	ENSMUST00000239275.2	1797	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACGTGGTCCCCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	128175788	128158216	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr2_-_128159593_128172764_128172970_128175572
ENSMUST00000239365.2	chr9	-	809	6	FSM	ENSMUSG00000097195.11	ENSMUST00000239365.2	809	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	88404970	88403104	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404682_88404903
ENSMUST00000239388.2	chr8	+	1474	10	FSM	ENSMUSG00000038257.11	ENSMUST00000239388.2	1474	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCTGAAGGCATACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	56393859	56578387	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr8_+_56394010_56444160_56444289_56458151_56458220_56492616_56492841_56515465_56515549_56538148_56538287_56542018_56542234_56563481_56563626_56565864_56565910_56578108
ENSMUST00000239410.2	chr11	-	1900	15	FSM	ENSMUSG00000014195.17	ENSMUST00000239410.2	1900	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACCATGAGTGTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	100511014	100473880	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353_100510639_100510851
ENSMUST00000239463.2	chr9	+	2289	4	FSM	ENSMUSG00000042138.10	ENSMUST00000239463.2	2289	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	37400616	37435444	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_37401130_37428512_37428769_37430022_37430084_37433985
ENSMUST00000239472.2	chr9	+	988	1	FSM	ENSMUSG00000118653.2	ENSMUST00000239472.2	988	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAACATATGGT	NA	NA	NA	NA	NA	NA	NA	NA	56344740	56345728	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr9_+_56344700_56345700
ENSMUST00000239541.1	chrX	+	2091	12	FSM	ENSMUSG00000079418.6	ENSMUST00000239541.1	2091	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACGTTTCAGGACTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	139857694	139947266	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chrX_+_139857721_139887027_139887139_139890906_139891006_139893565_139893668_139893817_139893891_139895351_139895432_139896010_139896190_139896311_139896391_139941722_139941869_139943027_139943085_139945462_139945572_139946236
ENSMUST00000240535.1	chr11	+	191	1	FSM	ENSMUSG00000119776.1	ENSMUST00000240535.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGAGTAAAGTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	101518191	101518382	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_+_101518200_101518400
ENSMUST00020182120.1	chr11	-	236	1	FSM	ENSMUSG00002076556.1	ENSMUST00020182120.1	236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	675	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGCAGTCAAGAGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	3595521	3595285	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_3595300_3595500
ENSMUST00020183261.1	chr11	-	147	1	FSM	ENSMUSG00002075685.1	ENSMUST00020183261.1	147	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACATATTTAAGTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	3597325	3597178	mouse_sim_drna_ont	iso_detect_ref_ritchie_drna_ont	FSM_chr11_-_3597200_3597300
